Query 000789
Match_columns 1283
No_of_seqs 909 out of 4819
Neff 8.3
Searched_HMMs 46136
Date Mon Apr 1 23:42:36 2013
Command hhsearch -i /work/01045/syshi/lefta3m/000789.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/leftcdd/000789hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0055 Multidrug/pheromone ex 100.0 2E-217 3E-222 1986.3 129.8 1215 35-1281 12-1227(1228)
2 PTZ00265 multidrug resistance 100.0 1E-174 3E-179 1732.1 154.6 1225 34-1279 43-1465(1466)
3 KOG0054 Multidrug resistance-a 100.0 1E-162 2E-167 1537.7 127.0 1137 67-1279 217-1375(1381)
4 PLN03130 ABC transporter C fam 100.0 3E-157 7E-162 1579.9 149.2 1157 53-1281 303-1476(1622)
5 PLN03232 ABC transporter C fam 100.0 2E-156 5E-161 1574.9 146.1 1153 54-1281 304-1473(1495)
6 TIGR00957 MRP_assoc_pro multi 100.0 4E-151 9E-156 1525.9 150.4 1186 54-1279 320-1520(1522)
7 PTZ00243 ABC transporter; Prov 100.0 6E-145 1E-149 1460.0 147.7 1169 53-1281 246-1548(1560)
8 TIGR01271 CFTR_protein cystic 100.0 7E-142 2E-146 1431.2 148.9 1175 59-1281 88-1454(1490)
9 KOG0058 Peptide exporter, ABC 100.0 5E-111 1E-115 987.2 69.5 576 36-617 133-708 (716)
10 KOG0058 Peptide exporter, ABC 100.0 2E-109 4E-114 973.6 66.2 573 702-1281 133-706 (716)
11 KOG0055 Multidrug/pheromone ex 100.0 2E-102 3E-107 964.3 72.9 579 34-614 648-1226(1228)
12 COG2274 SunT ABC-type bacterio 100.0 3.3E-93 7.2E-98 877.0 73.5 570 35-613 139-708 (709)
13 COG2274 SunT ABC-type bacterio 100.0 8.8E-93 1.9E-97 873.2 70.8 551 718-1280 159-709 (709)
14 PRK11174 cysteine/glutathione 100.0 1E-87 2.2E-92 845.4 76.2 569 37-615 9-586 (588)
15 COG1132 MdlB ABC-type multidru 100.0 1.9E-86 4.1E-91 828.9 76.5 563 37-614 3-565 (567)
16 PTZ00265 multidrug resistance 100.0 1.4E-86 3.1E-91 887.2 76.9 571 37-613 812-1465(1466)
17 COG1132 MdlB ABC-type multidru 100.0 8.6E-86 1.9E-90 823.0 74.2 554 714-1281 13-566 (567)
18 TIGR00958 3a01208 Conjugate Tr 100.0 9.5E-86 2.1E-90 838.1 75.9 566 34-609 145-710 (711)
19 PRK11174 cysteine/glutathione 100.0 2E-85 4.2E-90 824.7 73.7 568 704-1281 10-586 (588)
20 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 3.6E-84 7.8E-89 825.2 78.0 564 36-613 121-685 (686)
21 TIGR00958 3a01208 Conjugate Tr 100.0 1.4E-84 3E-89 827.4 73.6 564 703-1276 148-711 (711)
22 TIGR01193 bacteriocin_ABC ABC- 100.0 5.6E-84 1.2E-88 826.4 76.6 565 36-611 142-707 (708)
23 PRK11160 cysteine/glutathione 100.0 8.3E-84 1.8E-88 803.0 75.8 566 38-611 4-572 (574)
24 KOG0056 Heavy metal exporter H 100.0 1.5E-87 3.3E-92 739.1 37.1 554 53-616 217-777 (790)
25 COG4988 CydD ABC-type transpor 100.0 1.2E-83 2.7E-88 743.9 69.5 552 721-1281 5-557 (559)
26 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 1.7E-83 3.6E-88 823.0 76.2 565 36-610 140-709 (710)
27 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 3.3E-83 7.1E-88 816.5 75.9 554 712-1279 132-685 (686)
28 COG4988 CydD ABC-type transpor 100.0 9.1E-83 2E-87 736.7 71.0 552 56-615 5-557 (559)
29 TIGR03375 type_I_sec_LssB type 100.0 5E-83 1.1E-87 815.8 75.0 557 36-601 133-689 (694)
30 TIGR01193 bacteriocin_ABC ABC- 100.0 4.7E-83 1E-87 817.8 73.8 564 704-1277 144-707 (708)
31 PRK11176 lipid transporter ATP 100.0 4.7E-82 1E-86 793.8 78.0 567 37-613 12-579 (582)
32 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 2.2E-82 4.7E-87 812.7 73.4 562 705-1276 143-709 (710)
33 PRK11160 cysteine/glutathione 100.0 8.4E-82 1.8E-86 785.0 74.6 564 706-1278 6-573 (574)
34 TIGR01846 type_I_sec_HlyB type 100.0 2.6E-81 5.6E-86 799.2 78.1 567 37-613 126-692 (694)
35 PRK10790 putative multidrug tr 100.0 4.8E-81 1E-85 784.9 77.3 568 37-616 10-578 (592)
36 PRK11176 lipid transporter ATP 100.0 3.1E-81 6.6E-86 786.4 75.3 511 764-1281 71-581 (582)
37 KOG0056 Heavy metal exporter H 100.0 1.2E-84 2.6E-89 716.2 37.7 503 771-1280 272-775 (790)
38 KOG0057 Mitochondrial Fe/S clu 100.0 1E-81 2.2E-86 713.4 61.8 571 36-615 11-588 (591)
39 TIGR03375 type_I_sec_LssB type 100.0 3.1E-81 6.7E-86 799.3 73.8 553 706-1267 137-689 (694)
40 PRK10790 putative multidrug tr 100.0 1E-80 2.2E-85 781.9 75.4 565 705-1281 12-577 (592)
41 TIGR02203 MsbA_lipidA lipid A 100.0 4.5E-80 9.8E-85 775.2 77.0 565 39-613 3-568 (571)
42 PRK13657 cyclic beta-1,2-gluca 100.0 7.4E-80 1.6E-84 772.8 78.3 567 36-614 5-571 (588)
43 TIGR01846 type_I_sec_HlyB type 100.0 3.2E-80 6.8E-85 789.2 75.5 565 706-1280 129-693 (694)
44 TIGR01192 chvA glucan exporter 100.0 9.3E-80 2E-84 767.4 77.8 565 37-613 6-570 (585)
45 TIGR02868 CydC thiol reductant 100.0 1.7E-80 3.7E-85 770.2 69.5 525 40-572 3-529 (529)
46 KOG0057 Mitochondrial Fe/S clu 100.0 1.2E-80 2.5E-85 704.9 59.8 513 759-1281 75-588 (591)
47 PRK10789 putative multidrug tr 100.0 1.1E-79 2.3E-84 766.2 72.9 544 64-615 8-552 (569)
48 TIGR02203 MsbA_lipidA lipid A 100.0 3E-79 6.5E-84 767.8 74.4 563 708-1279 6-568 (571)
49 COG4987 CydC ABC-type transpor 100.0 1.7E-79 3.6E-84 695.4 63.9 505 766-1278 66-572 (573)
50 TIGR02204 MsbA_rel ABC transpo 100.0 1.1E-78 2.3E-83 763.1 77.2 571 37-613 5-575 (576)
51 COG4987 CydC ABC-type transpor 100.0 1.4E-78 3E-83 687.9 65.9 555 49-611 14-571 (573)
52 PRK13657 cyclic beta-1,2-gluca 100.0 5E-78 1.1E-82 756.3 76.1 564 704-1279 7-570 (588)
53 TIGR02868 CydC thiol reductant 100.0 2.8E-78 6.1E-83 750.4 69.1 521 708-1238 5-529 (529)
54 TIGR01192 chvA glucan exporter 100.0 1.7E-77 3.6E-82 747.1 75.8 565 704-1280 7-571 (585)
55 TIGR02204 MsbA_rel ABC transpo 100.0 1.3E-77 2.8E-82 753.2 74.7 564 710-1279 12-575 (576)
56 PRK10789 putative multidrug tr 100.0 1.5E-77 3.2E-82 746.9 72.6 515 759-1281 37-552 (569)
57 TIGR02857 CydD thiol reductant 100.0 1.8E-77 3.9E-82 743.2 71.2 524 53-584 5-529 (529)
58 TIGR00957 MRP_assoc_pro multi 100.0 1.6E-77 3.4E-82 810.5 74.7 541 61-612 975-1519(1522)
59 COG5265 ATM1 ABC-type transpor 100.0 7.5E-80 1.6E-84 675.4 41.0 492 780-1277 4-496 (497)
60 PLN03130 ABC transporter C fam 100.0 1.3E-76 2.8E-81 799.1 74.8 540 64-615 928-1476(1622)
61 COG1123 ATPase components of v 100.0 1.3E-78 2.9E-83 706.7 48.0 483 374-1278 5-531 (539)
62 TIGR01842 type_I_sec_PrtD type 100.0 7.3E-76 1.6E-80 729.3 73.9 533 53-600 8-542 (544)
63 COG5265 ATM1 ABC-type transpor 100.0 1.2E-78 2.6E-83 666.0 42.2 491 116-611 4-496 (497)
64 TIGR02857 CydD thiol reductant 100.0 1.4E-75 3.1E-80 726.2 70.5 526 717-1250 4-529 (529)
65 PTZ00243 ABC transporter; Prov 100.0 3E-75 6.5E-80 785.2 75.3 507 105-614 1009-1547(1560)
66 PLN03232 ABC transporter C fam 100.0 1.9E-75 4.1E-80 789.2 71.6 512 97-615 953-1473(1495)
67 TIGR01842 type_I_sec_PrtD type 100.0 6.3E-74 1.4E-78 712.0 72.7 535 717-1267 7-543 (544)
68 TIGR01194 cyc_pep_trnsptr cycl 100.0 8.6E-73 1.9E-77 701.3 68.3 535 36-592 3-551 (555)
69 PRK10261 glutathione transport 100.0 1.7E-74 3.8E-79 722.5 51.4 499 374-1274 12-561 (623)
70 PRK13549 xylose transporter AT 100.0 4.5E-74 9.7E-79 706.4 44.9 463 374-1265 5-493 (506)
71 PRK15134 microcin C ABC transp 100.0 2.1E-73 4.5E-78 704.3 50.5 468 374-1270 5-519 (529)
72 KOG0054 Multidrug resistance-a 100.0 1E-71 2.3E-76 708.1 60.4 510 96-610 860-1372(1381)
73 COG4172 ABC-type uncharacteriz 100.0 8.1E-73 1.8E-77 614.5 42.8 471 374-1274 6-524 (534)
74 PRK09700 D-allose transporter 100.0 7E-73 1.5E-77 697.2 46.1 460 374-1263 5-495 (510)
75 TIGR01271 CFTR_protein cystic 100.0 1.6E-70 3.5E-75 739.8 72.7 500 106-615 937-1454(1490)
76 TIGR01194 cyc_pep_trnsptr cycl 100.0 3.1E-70 6.8E-75 678.4 66.4 534 703-1258 4-551 (555)
77 PRK10762 D-ribose transporter 100.0 1.7E-72 3.7E-77 691.5 45.0 455 374-1265 4-483 (501)
78 TIGR03269 met_CoM_red_A2 methy 100.0 2.2E-72 4.7E-77 694.4 44.6 458 375-1266 1-517 (520)
79 COG4618 ArpD ABC-type protease 100.0 1E-70 2.2E-75 617.1 52.9 524 730-1267 37-561 (580)
80 TIGR01257 rim_protein retinal- 100.0 4.2E-69 9.1E-74 712.8 75.1 221 373-602 927-1151(2272)
81 PRK11288 araG L-arabinose tran 100.0 6.3E-72 1.4E-76 686.5 44.3 457 374-1265 4-484 (501)
82 TIGR02633 xylG D-xylose ABC tr 100.0 1.1E-71 2.3E-76 685.6 45.5 457 375-1263 2-489 (500)
83 PRK15439 autoinducer 2 ABC tra 100.0 2.4E-71 5.3E-76 681.4 47.0 466 374-1266 11-492 (510)
84 COG4618 ArpD ABC-type protease 100.0 2.8E-69 6.1E-74 605.4 55.9 530 58-601 30-561 (580)
85 PRK10982 galactose/methyl gala 100.0 1.5E-70 3.2E-75 673.4 45.7 454 377-1264 1-478 (491)
86 TIGR00956 3a01205 Pleiotropic 100.0 1.4E-69 3.1E-74 724.2 58.9 213 1039-1262 759-989 (1394)
87 PRK10938 putative molybdenum t 100.0 3.5E-70 7.6E-75 670.5 45.0 454 374-1259 3-485 (490)
88 PRK15064 ABC transporter ATP-b 100.0 1.8E-69 3.9E-74 669.4 51.3 482 375-1267 2-526 (530)
89 PRK10522 multidrug transporter 100.0 6.8E-67 1.5E-71 648.8 67.8 522 43-595 6-534 (547)
90 PRK11819 putative ABC transpor 100.0 3.4E-67 7.3E-72 650.7 52.7 484 374-1267 6-534 (556)
91 TIGR03719 ABC_ABC_ChvD ATP-bin 100.0 2E-66 4.4E-71 643.9 56.2 484 374-1267 4-532 (552)
92 PRK10522 multidrug transporter 100.0 6.3E-65 1.4E-69 631.2 66.0 473 771-1266 61-539 (547)
93 TIGR00954 3a01203 Peroxysomal 100.0 4.4E-65 9.4E-70 640.0 63.7 531 37-586 78-653 (659)
94 PLN03140 ABC transporter G fam 100.0 2.2E-64 4.9E-69 670.0 64.3 215 1038-1262 866-1106(1470)
95 PRK10636 putative ABC transpor 100.0 4.2E-65 9.2E-70 637.8 53.1 201 1039-1266 312-517 (638)
96 PRK11147 ABC transporter ATPas 100.0 1.3E-63 2.8E-68 626.6 55.0 202 1039-1266 319-528 (635)
97 PLN03073 ABC transporter F fam 100.0 1.1E-63 2.4E-68 624.8 48.3 201 1039-1265 508-713 (718)
98 COG1129 MglA ABC-type sugar tr 100.0 4.4E-63 9.4E-68 573.6 41.5 453 374-1258 8-482 (500)
99 TIGR00954 3a01203 Peroxysomal 100.0 4.7E-61 1E-65 603.5 63.3 529 704-1252 79-653 (659)
100 PRK13409 putative ATPase RIL; 100.0 1.9E-63 4.1E-68 613.0 38.7 192 1039-1260 340-536 (590)
101 COG0488 Uup ATPase components 100.0 2.7E-61 5.8E-66 576.3 47.6 486 374-1267 3-526 (530)
102 COG3845 ABC-type uncharacteriz 100.0 5.2E-60 1.1E-64 533.9 41.9 463 374-1263 4-489 (501)
103 cd03289 ABCC_CFTR2 The CFTR su 100.0 3.4E-53 7.3E-58 475.1 28.2 238 1038-1280 1-238 (275)
104 COG1126 GlnQ ABC-type polar am 100.0 3.8E-52 8.3E-57 422.8 21.5 221 374-604 2-229 (240)
105 COG1126 GlnQ ABC-type polar am 100.0 5E-51 1.1E-55 414.7 22.0 219 1039-1271 2-230 (240)
106 COG1135 AbcC ABC-type metal io 100.0 8.9E-50 1.9E-54 426.0 21.1 220 375-605 2-236 (339)
107 COG1135 AbcC ABC-type metal io 100.0 1.6E-49 3.4E-54 424.2 21.1 220 1040-1270 2-235 (339)
108 COG1125 OpuBA ABC-type proline 100.0 1E-49 2.2E-54 411.9 18.7 224 375-608 2-233 (309)
109 cd03289 ABCC_CFTR2 The CFTR su 100.0 9E-49 2E-53 439.3 27.4 237 373-613 1-237 (275)
110 COG1117 PstB ABC-type phosphat 100.0 2.2E-49 4.8E-54 399.8 19.1 221 373-603 6-240 (253)
111 PRK14257 phosphate ABC transpo 100.0 1.5E-48 3.2E-53 448.9 27.4 226 1036-1269 77-316 (329)
112 KOG0927 Predicted transporter 100.0 1.4E-47 3.1E-52 433.2 32.5 199 1039-1262 389-592 (614)
113 COG1117 PstB ABC-type phosphat 100.0 2.9E-48 6.2E-53 391.8 18.6 221 1039-1269 7-240 (253)
114 COG1125 OpuBA ABC-type proline 100.0 7E-48 1.5E-52 398.3 19.4 221 1040-1274 2-233 (309)
115 cd03252 ABCC_Hemolysin The ABC 100.0 3E-46 6.6E-51 415.1 28.3 236 1040-1278 1-236 (237)
116 COG4615 PvdE ABC-type sideroph 100.0 1.7E-43 3.8E-48 383.9 48.6 470 101-592 55-529 (546)
117 cd03288 ABCC_SUR2 The SUR doma 100.0 5E-46 1.1E-50 417.4 29.2 241 1036-1279 16-256 (257)
118 KOG0065 Pleiotropic drug resis 100.0 1.8E-45 3.9E-50 455.5 36.5 200 1054-1263 803-1018(1391)
119 PRK14257 phosphate ABC transpo 100.0 2.9E-46 6.4E-51 429.9 27.5 225 371-603 77-316 (329)
120 COG1127 Ttg2A ABC-type transpo 100.0 5.1E-46 1.1E-50 384.1 21.6 222 373-604 7-239 (263)
121 cd03252 ABCC_Hemolysin The ABC 100.0 1.8E-45 4E-50 408.8 27.8 234 375-610 1-234 (237)
122 COG3839 MalK ABC-type sugar tr 100.0 7.4E-46 1.6E-50 414.7 22.8 218 374-607 3-230 (338)
123 COG3840 ThiQ ABC-type thiamine 100.0 1.7E-45 3.7E-50 361.4 20.5 209 375-601 2-220 (231)
124 COG1120 FepC ABC-type cobalami 100.0 1.1E-45 2.3E-50 398.3 20.5 214 374-601 2-229 (258)
125 KOG0062 ATPase component of AB 100.0 6.2E-45 1.3E-49 409.7 26.6 210 1039-1280 362-575 (582)
126 COG2884 FtsE Predicted ATPase 100.0 1E-45 2.2E-50 366.8 17.3 207 375-594 2-220 (223)
127 cd03253 ABCC_ATM1_transporter 100.0 1.2E-44 2.6E-49 402.2 28.0 235 1040-1278 1-235 (236)
128 cd03251 ABCC_MsbA MsbA is an e 100.0 9.3E-45 2E-49 402.5 27.0 233 1040-1275 1-233 (234)
129 COG3842 PotA ABC-type spermidi 100.0 9.6E-46 2.1E-50 416.1 19.1 219 373-607 4-233 (352)
130 cd03288 ABCC_SUR2 The SUR doma 100.0 1.5E-44 3.3E-49 405.3 28.5 240 370-611 15-254 (257)
131 cd03244 ABCC_MRP_domain2 Domai 100.0 1.2E-44 2.6E-49 398.0 26.9 220 1038-1260 1-220 (221)
132 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 1.8E-44 3.8E-49 401.2 27.9 236 1040-1277 1-236 (238)
133 TIGR02314 ABC_MetN D-methionin 100.0 7.5E-45 1.6E-49 418.4 25.2 222 1040-1272 2-236 (343)
134 COG3638 ABC-type phosphate/pho 100.0 2.7E-45 5.9E-50 377.7 19.2 216 374-599 3-236 (258)
135 COG1116 TauB ABC-type nitrate/ 100.0 4.1E-45 8.8E-50 384.8 20.9 198 374-590 3-212 (248)
136 COG1120 FepC ABC-type cobalami 100.0 4.7E-45 1E-49 393.3 21.4 215 1039-1267 2-229 (258)
137 COG1124 DppF ABC-type dipeptid 100.0 8.2E-45 1.8E-49 377.9 22.2 227 1039-1276 3-241 (252)
138 cd03254 ABCC_Glucan_exporter_l 100.0 2.7E-44 5.8E-49 397.4 27.6 227 1038-1267 1-227 (229)
139 COG1136 SalX ABC-type antimicr 100.0 1.3E-44 2.8E-49 382.3 23.6 210 375-591 2-222 (226)
140 COG3839 MalK ABC-type sugar tr 100.0 5.8E-45 1.3E-49 407.5 22.2 218 1039-1272 3-229 (338)
141 COG1124 DppF ABC-type dipeptid 100.0 8.7E-45 1.9E-49 377.7 21.4 225 374-609 3-240 (252)
142 COG3840 ThiQ ABC-type thiamine 100.0 1.5E-44 3.2E-49 354.9 21.4 210 1040-1267 2-220 (231)
143 cd03251 ABCC_MsbA MsbA is an e 100.0 3.3E-44 7.1E-49 398.1 26.8 231 375-607 1-231 (234)
144 cd03254 ABCC_Glucan_exporter_l 100.0 3.9E-44 8.4E-49 396.2 27.3 227 373-601 1-227 (229)
145 cd03253 ABCC_ATM1_transporter 100.0 4.3E-44 9.4E-49 397.7 27.3 233 375-610 1-233 (236)
146 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 4.7E-44 1E-48 397.8 27.1 227 375-601 1-227 (238)
147 TIGR02314 ABC_MetN D-methionin 100.0 2.1E-44 4.5E-49 414.8 25.0 226 375-607 2-237 (343)
148 COG1122 CbiO ABC-type cobalt t 100.0 1.4E-44 3.1E-49 391.1 21.8 215 374-601 3-229 (235)
149 COG1122 CbiO ABC-type cobalt t 100.0 1.8E-44 3.9E-49 390.2 22.6 216 1039-1267 3-229 (235)
150 COG4178 ABC-type uncharacteriz 100.0 8.2E-41 1.8E-45 395.2 55.4 473 761-1251 89-587 (604)
151 COG2884 FtsE Predicted ATPase 100.0 1.9E-44 4.1E-49 357.7 18.6 209 1040-1261 2-221 (223)
152 COG1127 Ttg2A ABC-type transpo 100.0 5.3E-44 1.2E-48 369.2 22.6 224 1039-1276 8-245 (263)
153 cd03245 ABCC_bacteriocin_expor 100.0 1.4E-43 3E-48 389.2 27.3 220 1038-1259 1-220 (220)
154 cd03244 ABCC_MRP_domain2 Domai 100.0 1.2E-43 2.6E-48 390.1 26.6 220 373-594 1-220 (221)
155 COG4615 PvdE ABC-type sideroph 100.0 5.2E-41 1.1E-45 364.7 45.6 472 762-1258 52-529 (546)
156 PRK13631 cbiO cobalt transport 100.0 1.9E-43 4E-48 405.6 27.7 221 1039-1266 21-265 (320)
157 COG3842 PotA ABC-type spermidi 100.0 3.4E-44 7.4E-49 403.5 20.8 219 1039-1273 5-233 (352)
158 COG3638 ABC-type phosphate/pho 100.0 7.6E-44 1.6E-48 367.1 20.8 215 1039-1266 3-237 (258)
159 COG1118 CysA ABC-type sulfate/ 100.0 3.4E-44 7.4E-49 381.9 18.8 217 374-606 2-233 (345)
160 COG1136 SalX ABC-type antimicr 100.0 2E-43 4.3E-48 373.3 23.9 207 1040-1257 2-222 (226)
161 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 1.5E-43 3.2E-48 379.3 23.1 210 374-601 4-228 (254)
162 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 1.5E-43 3.2E-48 379.2 23.2 211 1039-1267 4-228 (254)
163 cd03245 ABCC_bacteriocin_expor 100.0 3.7E-43 8E-48 385.8 26.8 220 373-593 1-220 (220)
164 PRK13631 cbiO cobalt transport 100.0 3.9E-43 8.5E-48 403.0 28.0 222 373-601 20-266 (320)
165 COG1116 TauB ABC-type nitrate/ 100.0 1.3E-43 2.9E-48 373.4 22.0 198 1039-1255 3-211 (248)
166 cd03261 ABC_Org_Solvent_Resist 100.0 1.8E-43 3.9E-48 392.1 23.9 218 1040-1272 1-231 (235)
167 cd03248 ABCC_TAP TAP, the Tran 100.0 4.1E-43 8.8E-48 387.0 25.4 219 1036-1255 8-226 (226)
168 cd03260 ABC_PstB_phosphate_tra 100.0 2.1E-43 4.5E-48 389.6 22.4 213 1040-1264 1-227 (227)
169 COG4178 ABC-type uncharacteriz 100.0 1.2E-39 2.7E-44 385.2 55.2 489 73-585 69-587 (604)
170 PRK13650 cbiO cobalt transport 100.0 5E-43 1.1E-47 397.0 24.9 218 1039-1267 4-230 (279)
171 cd03248 ABCC_TAP TAP, the Tran 100.0 6.8E-43 1.5E-47 385.2 25.3 220 370-589 7-226 (226)
172 PRK14250 phosphate ABC transpo 100.0 9.9E-43 2.1E-47 387.1 26.5 224 1039-1276 3-231 (241)
173 PRK11432 fbpC ferric transport 100.0 3.7E-43 8.1E-48 406.7 23.7 219 1039-1273 6-233 (351)
174 PRK14269 phosphate ABC transpo 100.0 7.9E-43 1.7E-47 389.3 25.4 220 1039-1268 2-232 (246)
175 cd03261 ABC_Org_Solvent_Resist 100.0 9.5E-43 2E-47 386.3 25.4 217 375-601 1-227 (235)
176 PRK11650 ugpC glycerol-3-phosp 100.0 5.7E-43 1.2E-47 406.5 24.4 220 1039-1273 3-231 (356)
177 PRK11650 ugpC glycerol-3-phosp 100.0 8.6E-43 1.9E-47 405.0 25.8 218 374-606 3-230 (356)
178 PRK11153 metN DL-methionine tr 100.0 9.4E-43 2E-47 404.7 25.1 222 1040-1272 2-236 (343)
179 PRK11432 fbpC ferric transport 100.0 1.1E-42 2.3E-47 403.0 24.8 217 374-606 6-232 (351)
180 PRK14273 phosphate ABC transpo 100.0 2E-42 4.4E-47 388.1 25.5 225 1039-1273 7-245 (254)
181 TIGR03265 PhnT2 putative 2-ami 100.0 1.2E-42 2.6E-47 403.3 24.4 218 1039-1272 4-230 (353)
182 PRK13647 cbiO cobalt transport 100.0 1.7E-42 3.8E-47 391.6 24.5 214 1039-1265 4-226 (274)
183 TIGR01186 proV glycine betaine 100.0 8.1E-43 1.8E-47 403.4 22.0 208 1055-1273 6-226 (363)
184 TIGR03265 PhnT2 putative 2-ami 100.0 1.6E-42 3.5E-47 402.3 24.5 221 374-606 4-230 (353)
185 PRK13637 cbiO cobalt transport 100.0 1.9E-42 4.1E-47 393.6 24.5 218 1040-1266 3-234 (287)
186 PRK13650 cbiO cobalt transport 100.0 2E-42 4.3E-47 392.2 24.4 217 374-601 4-230 (279)
187 cd03260 ABC_PstB_phosphate_tra 100.0 1.1E-42 2.5E-47 383.7 21.6 210 375-598 1-227 (227)
188 TIGR01186 proV glycine betaine 100.0 1.1E-42 2.4E-47 402.2 22.5 212 390-608 6-227 (363)
189 cd03369 ABCC_NFT1 Domain 2 of 100.0 4.1E-42 8.8E-47 373.6 25.5 203 1038-1261 5-207 (207)
190 TIGR00972 3a0107s01c2 phosphat 100.0 2.7E-42 6E-47 385.4 24.8 223 1040-1272 2-238 (247)
191 PRK11153 metN DL-methionine tr 100.0 2.2E-42 4.8E-47 401.5 25.0 225 375-606 2-236 (343)
192 PRK14269 phosphate ABC transpo 100.0 2.4E-42 5.3E-47 385.4 24.2 219 374-602 2-232 (246)
193 PRK13643 cbiO cobalt transport 100.0 1.8E-42 3.9E-47 394.0 23.3 217 1040-1267 2-234 (288)
194 cd03296 ABC_CysA_sulfate_impor 100.0 3.9E-42 8.3E-47 382.3 25.0 212 1040-1267 3-227 (239)
195 cd03263 ABC_subfamily_A The AB 100.0 2.7E-42 5.8E-47 379.1 23.5 212 1040-1264 1-219 (220)
196 cd03256 ABC_PhnC_transporter A 100.0 2.5E-42 5.5E-47 384.9 23.5 214 1040-1266 1-234 (241)
197 cd03294 ABC_Pro_Gly_Bertaine T 100.0 2.4E-42 5.2E-47 389.7 23.4 220 1041-1274 26-258 (269)
198 PRK13646 cbiO cobalt transport 100.0 3.2E-42 6.9E-47 391.9 24.4 221 1040-1267 3-236 (286)
199 cd03219 ABC_Mj1267_LivG_branch 100.0 2.5E-42 5.3E-47 383.6 22.9 222 375-601 1-233 (236)
200 PRK10851 sulfate/thiosulfate t 100.0 5.1E-42 1.1E-46 398.1 26.5 218 1039-1272 2-232 (353)
201 PRK14242 phosphate transporter 100.0 3.3E-42 7.1E-47 386.5 24.0 220 1039-1268 6-239 (253)
202 PRK09536 btuD corrinoid ABC tr 100.0 4E-42 8.7E-47 402.3 25.4 214 1039-1266 3-228 (402)
203 PRK13637 cbiO cobalt transport 100.0 7E-42 1.5E-46 389.0 26.6 220 375-601 3-235 (287)
204 TIGR00960 3a0501s02 Type II (G 100.0 2E-42 4.3E-47 378.8 21.3 204 1040-1255 2-216 (216)
205 PRK14250 phosphate ABC transpo 100.0 6.7E-42 1.4E-46 380.4 25.7 224 374-609 3-230 (241)
206 PRK13635 cbiO cobalt transport 100.0 4.4E-42 9.6E-47 389.0 24.7 217 1039-1267 5-230 (279)
207 PRK10744 pstB phosphate transp 100.0 5.8E-42 1.3E-46 385.4 25.5 221 1037-1267 11-245 (260)
208 cd03219 ABC_Mj1267_LivG_branch 100.0 3.4E-42 7.3E-47 382.5 23.2 218 1040-1267 1-233 (236)
209 PRK09452 potA putrescine/sperm 100.0 4.9E-42 1.1E-46 399.8 25.5 218 373-606 13-240 (375)
210 PRK13642 cbiO cobalt transport 100.0 7.2E-42 1.6E-46 387.5 26.2 218 1039-1267 4-230 (277)
211 PRK14235 phosphate transporter 100.0 5.6E-42 1.2E-46 386.5 24.9 224 1037-1270 17-255 (267)
212 TIGR02315 ABC_phnC phosphonate 100.0 4.7E-42 1E-46 383.1 23.9 213 1040-1265 2-234 (243)
213 COG1118 CysA ABC-type sulfate/ 100.0 1.9E-42 4.2E-47 368.6 19.4 218 1039-1272 2-233 (345)
214 PRK15079 oligopeptide ABC tran 100.0 6.1E-42 1.3E-46 394.5 25.1 226 1039-1274 8-259 (331)
215 cd03291 ABCC_CFTR1 The CFTR su 100.0 3.3E-41 7.1E-46 379.7 30.4 222 1034-1276 34-256 (282)
216 TIGR03258 PhnT 2-aminoethylpho 100.0 4.3E-42 9.3E-47 399.0 23.7 219 1038-1272 4-234 (362)
217 PRK14273 phosphate ABC transpo 100.0 8.9E-42 1.9E-46 383.0 25.5 225 373-607 6-245 (254)
218 cd03258 ABC_MetN_methionine_tr 100.0 5.8E-42 1.3E-46 379.7 23.7 217 1040-1267 2-231 (233)
219 PRK14267 phosphate ABC transpo 100.0 5.2E-42 1.1E-46 384.8 23.5 226 1039-1274 4-245 (253)
220 PRK10851 sulfate/thiosulfate t 100.0 6.7E-42 1.5E-46 397.1 25.1 221 374-606 2-232 (353)
221 PRK13646 cbiO cobalt transport 100.0 8E-42 1.7E-46 388.6 25.2 220 375-601 3-236 (286)
222 TIGR03258 PhnT 2-aminoethylpho 100.0 6.1E-42 1.3E-46 397.7 24.5 223 372-606 3-234 (362)
223 PRK09452 potA putrescine/sperm 100.0 5.2E-42 1.1E-46 399.6 23.9 218 1039-1272 14-240 (375)
224 cd03259 ABC_Carb_Solutes_like 100.0 3.7E-42 8E-47 375.8 21.2 204 1040-1259 1-213 (213)
225 PRK13643 cbiO cobalt transport 100.0 7.3E-42 1.6E-46 389.0 24.3 220 375-601 2-234 (288)
226 PRK13636 cbiO cobalt transport 100.0 7.9E-42 1.7E-46 388.0 24.3 216 1039-1267 5-232 (283)
227 PRK14247 phosphate ABC transpo 100.0 7.7E-42 1.7E-46 382.7 23.9 226 1039-1274 3-242 (250)
228 TIGR00972 3a0107s01c2 phosphat 100.0 1.4E-41 2.9E-46 379.8 25.8 220 375-604 2-236 (247)
229 PRK13634 cbiO cobalt transport 100.0 7.1E-42 1.5E-46 389.5 23.8 218 1040-1267 3-236 (290)
230 PRK13647 cbiO cobalt transport 100.0 8.8E-42 1.9E-46 385.8 24.3 212 374-598 4-225 (274)
231 PRK13634 cbiO cobalt transport 100.0 1.4E-41 2.9E-46 387.2 25.9 220 375-601 3-236 (290)
232 cd03295 ABC_OpuCA_Osmoprotecti 100.0 7.6E-42 1.6E-46 380.6 23.3 217 1040-1267 1-226 (242)
233 cd03296 ABC_CysA_sulfate_impor 100.0 8.1E-42 1.8E-46 379.7 23.4 215 375-601 3-227 (239)
234 cd03224 ABC_TM1139_LivF_branch 100.0 9.9E-42 2.1E-46 375.2 23.7 217 1040-1266 1-221 (222)
235 PRK14242 phosphate transporter 100.0 9.7E-42 2.1E-46 382.6 23.9 219 374-602 6-239 (253)
236 PRK11629 lolD lipoprotein tran 100.0 9.5E-42 2.1E-46 377.6 23.5 211 1039-1260 5-228 (233)
237 cd03264 ABC_drug_resistance_li 100.0 8.7E-42 1.9E-46 372.3 22.8 204 1040-1259 1-211 (211)
238 PRK13651 cobalt transporter AT 100.0 9.7E-42 2.1E-46 389.2 24.1 217 1040-1267 3-255 (305)
239 PRK15079 oligopeptide ABC tran 100.0 1.5E-41 3.3E-46 391.2 25.8 229 374-609 8-260 (331)
240 TIGR03005 ectoine_ehuA ectoine 100.0 1.4E-41 3E-46 380.9 24.8 219 1040-1272 1-242 (252)
241 PRK13652 cbiO cobalt transport 100.0 1.3E-41 2.9E-46 385.3 24.9 215 1040-1267 4-228 (277)
242 cd03265 ABC_DrrA DrrA is the A 100.0 1E-41 2.3E-46 374.0 23.2 210 1040-1264 1-219 (220)
243 PRK11000 maltose/maltodextrin 100.0 9.1E-42 2E-46 399.4 24.1 218 1039-1272 3-229 (369)
244 PRK13632 cbiO cobalt transport 100.0 1.3E-41 2.8E-46 384.4 24.6 217 1039-1267 7-232 (271)
245 cd03266 ABC_NatA_sodium_export 100.0 1.1E-41 2.5E-46 373.5 23.3 208 1040-1259 2-218 (218)
246 PRK10744 pstB phosphate transp 100.0 1.9E-41 4.1E-46 381.2 25.7 224 372-605 11-249 (260)
247 PRK13651 cobalt transporter AT 100.0 1.8E-41 4E-46 386.9 25.8 220 375-601 3-255 (305)
248 cd03250 ABCC_MRP_domain1 Domai 100.0 1.9E-41 4.1E-46 367.4 24.4 200 1040-1254 1-204 (204)
249 COG4175 ProV ABC-type proline/ 100.0 4.4E-42 9.5E-47 365.3 18.8 226 374-610 4-264 (386)
250 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 1.4E-41 3E-46 377.1 23.7 217 1040-1267 2-222 (236)
251 cd03224 ABC_TM1139_LivF_branch 100.0 1.1E-41 2.3E-46 374.9 22.6 217 375-600 1-221 (222)
252 PRK14274 phosphate ABC transpo 100.0 1.5E-41 3.3E-46 382.0 24.3 224 1039-1272 12-249 (259)
253 cd03295 ABC_OpuCA_Osmoprotecti 100.0 1.5E-41 3.2E-46 378.3 23.9 218 375-601 1-226 (242)
254 cd03256 ABC_PhnC_transporter A 100.0 1.3E-41 2.9E-46 379.1 23.5 221 375-599 1-233 (241)
255 PRK11831 putative ABC transpor 100.0 1.6E-41 3.4E-46 383.3 24.3 225 1039-1277 7-244 (269)
256 PRK14268 phosphate ABC transpo 100.0 1.4E-41 3E-46 381.9 23.6 224 1039-1272 12-248 (258)
257 PRK14244 phosphate ABC transpo 100.0 9.2E-42 2E-46 382.2 22.1 223 1040-1272 6-243 (251)
258 PRK11308 dppF dipeptide transp 100.0 2.1E-41 4.5E-46 389.8 25.7 227 1039-1275 5-253 (327)
259 PRK13633 cobalt transporter AT 100.0 1.5E-41 3.3E-46 385.4 24.2 218 1039-1267 4-234 (280)
260 TIGR00960 3a0501s02 Type II (G 100.0 6.3E-42 1.4E-46 374.8 20.2 203 375-589 2-216 (216)
261 PRK09536 btuD corrinoid ABC tr 100.0 1.2E-41 2.7E-46 398.2 24.0 214 374-601 3-229 (402)
262 PRK10575 iron-hydroxamate tran 100.0 1.4E-41 3.1E-46 383.1 23.6 214 1039-1266 11-237 (265)
263 PRK14248 phosphate ABC transpo 100.0 1.8E-41 4E-46 383.1 24.5 220 1039-1268 21-254 (268)
264 cd03258 ABC_MetN_methionine_tr 100.0 1.3E-41 2.9E-46 376.8 22.9 220 375-601 2-231 (233)
265 PRK14240 phosphate transporter 100.0 2.3E-41 5E-46 378.9 25.1 225 1038-1272 2-240 (250)
266 PRK13640 cbiO cobalt transport 100.0 2.9E-41 6.3E-46 383.2 26.0 217 1039-1267 5-233 (282)
267 PRK10070 glycine betaine trans 100.0 1.8E-41 3.9E-46 396.6 25.0 206 1056-1272 42-260 (400)
268 PRK14259 phosphate ABC transpo 100.0 2.3E-41 5E-46 381.6 25.1 222 1038-1269 12-256 (269)
269 cd03268 ABC_BcrA_bacitracin_re 100.0 1.4E-41 3E-46 369.8 22.4 204 1040-1259 1-208 (208)
270 PRK14237 phosphate transporter 100.0 2.2E-41 4.8E-46 381.7 24.8 220 1038-1267 19-252 (267)
271 PRK13537 nodulation ABC transp 100.0 1.6E-41 3.5E-46 388.4 24.0 214 1039-1267 7-228 (306)
272 PRK14235 phosphate transporter 100.0 2E-41 4.4E-46 381.9 24.3 220 372-601 17-252 (267)
273 PRK14239 phosphate transporter 100.0 2.3E-41 4.9E-46 379.6 24.5 221 1039-1269 5-239 (252)
274 PRK14251 phosphate ABC transpo 100.0 1.5E-41 3.3E-46 380.6 23.1 224 1039-1272 4-241 (251)
275 cd03369 ABCC_NFT1 Domain 2 of 100.0 3.8E-41 8.3E-46 365.9 25.5 203 373-595 5-207 (207)
276 PRK11000 maltose/maltodextrin 100.0 1.8E-41 4E-46 396.8 24.6 221 374-606 3-229 (369)
277 PRK14236 phosphate transporter 100.0 3.1E-41 6.6E-46 381.6 25.6 221 1037-1267 23-257 (272)
278 cd03226 ABC_cobalt_CbiO_domain 100.0 1.2E-41 2.7E-46 369.2 21.3 200 1041-1256 1-205 (205)
279 cd03294 ABC_Pro_Gly_Bertaine T 100.0 1.2E-41 2.5E-46 384.1 21.9 223 376-608 26-258 (269)
280 PRK14245 phosphate ABC transpo 100.0 1.8E-41 3.9E-46 379.6 23.2 222 1039-1270 3-238 (250)
281 PRK11607 potG putrescine trans 100.0 2E-41 4.4E-46 395.5 24.4 219 1038-1272 18-245 (377)
282 cd03263 ABC_subfamily_A The AB 100.0 1.2E-41 2.6E-46 373.8 21.3 215 375-598 1-219 (220)
283 PRK14262 phosphate ABC transpo 100.0 2.3E-41 5E-46 378.9 23.8 227 1039-1275 3-243 (250)
284 cd03259 ABC_Carb_Solutes_like 100.0 1.1E-41 2.4E-46 372.1 20.7 207 375-593 1-213 (213)
285 PRK11264 putative amino-acid A 100.0 3.1E-41 6.7E-46 378.0 24.8 225 1040-1278 4-246 (250)
286 TIGR02315 ABC_phnC phosphonate 100.0 2.3E-41 5E-46 377.6 23.6 220 375-598 2-233 (243)
287 PRK13635 cbiO cobalt transport 100.0 2.6E-41 5.6E-46 382.7 24.3 216 374-601 5-230 (279)
288 PRK14256 phosphate ABC transpo 100.0 3.6E-41 7.8E-46 377.6 25.0 224 1038-1271 3-241 (252)
289 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 1.1E-41 2.4E-46 373.6 20.3 205 1040-1255 1-218 (218)
290 cd03218 ABC_YhbG The ABC trans 100.0 2.6E-41 5.7E-46 374.3 23.6 217 1040-1266 1-222 (232)
291 TIGR03411 urea_trans_UrtD urea 100.0 3.4E-41 7.4E-46 375.8 24.5 213 1040-1266 3-231 (242)
292 PRK14267 phosphate ABC transpo 100.0 2.3E-41 5.1E-46 379.5 23.3 218 374-601 4-238 (253)
293 PRK10619 histidine/lysine/argi 100.0 3.4E-41 7.4E-46 378.7 24.6 219 1038-1269 4-244 (257)
294 PRK14247 phosphate ABC transpo 100.0 3.4E-41 7.3E-46 377.5 24.4 219 374-602 3-236 (250)
295 PRK14249 phosphate ABC transpo 100.0 4.6E-41 1E-45 376.5 25.4 219 1039-1267 4-236 (251)
296 cd03218 ABC_YhbG The ABC trans 100.0 2.2E-41 4.9E-46 374.9 22.6 216 375-600 1-222 (232)
297 PRK13648 cbiO cobalt transport 100.0 3.6E-41 7.8E-46 380.7 24.4 217 1039-1267 7-232 (269)
298 PRK13644 cbiO cobalt transport 100.0 3.9E-41 8.5E-46 380.5 24.7 215 1040-1267 2-225 (274)
299 PRK11607 potG putrescine trans 100.0 4.7E-41 1E-45 392.5 26.0 223 372-606 17-245 (377)
300 PRK13642 cbiO cobalt transport 100.0 4.3E-41 9.3E-46 381.2 24.9 217 374-601 4-230 (277)
301 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 4E-41 8.7E-46 373.4 24.1 216 375-601 2-222 (236)
302 PRK11231 fecE iron-dicitrate t 100.0 3.2E-41 7E-46 378.5 23.6 221 1040-1276 3-235 (255)
303 PRK10070 glycine betaine trans 100.0 2.3E-41 5E-46 395.6 23.3 210 392-608 43-262 (400)
304 cd03291 ABCC_CFTR1 The CFTR su 100.0 1.9E-40 4.1E-45 373.5 29.7 218 370-607 35-253 (282)
305 TIGR02211 LolD_lipo_ex lipopro 100.0 2.9E-41 6.2E-46 371.1 22.6 206 1040-1256 2-220 (221)
306 PRK09493 glnQ glutamine ABC tr 100.0 3.7E-41 8E-46 374.8 23.8 214 1040-1267 2-226 (240)
307 cd03301 ABC_MalK_N The N-termi 100.0 2.2E-41 4.8E-46 369.8 21.6 204 1040-1259 1-213 (213)
308 PRK11022 dppD dipeptide transp 100.0 4.8E-41 1E-45 387.2 25.4 229 1039-1275 3-252 (326)
309 PRK14243 phosphate transporter 100.0 5.5E-41 1.2E-45 377.8 25.1 222 1039-1270 10-252 (264)
310 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 1.6E-41 3.4E-46 372.4 20.1 208 375-589 1-218 (218)
311 PRK11629 lolD lipoprotein tran 100.0 4.2E-41 9.2E-46 372.4 23.6 214 374-594 5-228 (233)
312 PRK11124 artP arginine transpo 100.0 4.5E-41 9.7E-46 374.6 23.9 214 1040-1267 3-231 (242)
313 TIGR02769 nickel_nikE nickel i 100.0 5.5E-41 1.2E-45 378.3 24.9 226 1040-1275 3-249 (265)
314 PRK14261 phosphate ABC transpo 100.0 5.7E-41 1.2E-45 376.2 24.9 228 1039-1276 6-247 (253)
315 PRK14238 phosphate transporter 100.0 6.8E-41 1.5E-45 378.2 25.6 222 1039-1270 24-259 (271)
316 PRK13636 cbiO cobalt transport 100.0 5.3E-41 1.1E-45 381.3 24.8 219 374-601 5-232 (283)
317 PRK11614 livF leucine/isoleuci 100.0 5.2E-41 1.1E-45 372.9 24.1 218 1039-1266 5-226 (237)
318 PRK14260 phosphate ABC transpo 100.0 4.4E-41 9.4E-46 378.1 23.8 222 1039-1270 7-247 (259)
319 TIGR03415 ABC_choXWV_ATP choli 100.0 3.3E-41 7.2E-46 391.4 23.4 213 390-609 37-263 (382)
320 cd03293 ABC_NrtD_SsuB_transpor 100.0 2.2E-41 4.8E-46 371.4 20.8 206 1040-1261 1-218 (220)
321 PRK11831 putative ABC transpor 100.0 3.4E-41 7.4E-46 380.6 22.9 226 374-609 7-242 (269)
322 cd03247 ABCC_cytochrome_bd The 100.0 3.2E-41 6.9E-46 357.1 21.2 178 1040-1259 1-178 (178)
323 PRK11308 dppF dipeptide transp 100.0 4.8E-41 1E-45 386.8 24.5 230 374-610 5-254 (327)
324 TIGR03415 ABC_choXWV_ATP choli 100.0 4.4E-41 9.6E-46 390.3 24.3 209 1055-1274 37-262 (382)
325 PRK13649 cbiO cobalt transport 100.0 7.5E-41 1.6E-45 380.6 25.7 218 1040-1267 3-235 (280)
326 cd03226 ABC_cobalt_CbiO_domain 100.0 1.9E-41 4.1E-46 367.7 19.9 199 376-590 1-205 (205)
327 PRK14274 phosphate ABC transpo 100.0 6.5E-41 1.4E-45 376.9 24.9 221 374-604 12-247 (259)
328 TIGR02769 nickel_nikE nickel i 100.0 4.3E-41 9.3E-46 379.2 23.4 220 375-601 3-241 (265)
329 PRK14268 phosphate ABC transpo 100.0 5E-41 1.1E-45 377.3 23.9 223 374-606 12-248 (258)
330 COG4555 NatA ABC-type Na+ tran 100.0 8.6E-42 1.9E-46 341.3 15.6 217 375-601 2-223 (245)
331 cd03266 ABC_NatA_sodium_export 100.0 3.1E-41 6.7E-46 370.0 21.5 211 375-593 2-218 (218)
332 cd03264 ABC_drug_resistance_li 100.0 3.6E-41 7.9E-46 367.4 21.9 203 375-593 1-211 (211)
333 PRK14259 phosphate ABC transpo 100.0 7.6E-41 1.6E-45 377.5 25.2 221 373-603 12-256 (269)
334 TIGR02673 FtsE cell division A 100.0 3E-41 6.5E-46 369.1 21.2 202 1040-1254 2-214 (214)
335 PRK13548 hmuV hemin importer A 100.0 1E-40 2.2E-45 374.3 26.1 214 1040-1267 3-231 (258)
336 TIGR03410 urea_trans_UrtE urea 100.0 6.2E-41 1.3E-45 370.7 23.9 213 1040-1265 1-220 (230)
337 PRK13537 nodulation ABC transp 100.0 3.6E-41 7.9E-46 385.5 22.7 218 373-601 6-228 (306)
338 PRK11247 ssuB aliphatic sulfon 100.0 5.9E-41 1.3E-45 374.1 23.7 204 1039-1262 12-219 (257)
339 PRK14240 phosphate transporter 100.0 9.2E-41 2E-45 374.0 25.4 223 373-605 2-239 (250)
340 cd03225 ABC_cobalt_CbiO_domain 100.0 3E-41 6.5E-46 368.2 20.9 202 1041-1254 1-211 (211)
341 TIGR03005 ectoine_ehuA ectoine 100.0 5.9E-41 1.3E-45 375.8 23.7 222 375-606 1-242 (252)
342 cd03250 ABCC_MRP_domain1 Domai 100.0 7.8E-41 1.7E-45 362.6 23.9 200 375-588 1-204 (204)
343 PRK11022 dppD dipeptide transp 100.0 4.7E-41 1E-45 387.2 23.5 229 375-610 4-253 (326)
344 COG0410 LivF ABC-type branched 100.0 7E-41 1.5E-45 346.3 22.2 220 374-601 3-227 (237)
345 PRK13641 cbiO cobalt transport 100.0 8.2E-41 1.8E-45 380.5 25.0 219 1039-1267 2-235 (287)
346 TIGR01288 nodI ATP-binding ABC 100.0 6E-41 1.3E-45 384.7 24.0 214 1039-1267 4-225 (303)
347 PRK13645 cbiO cobalt transport 100.0 6.8E-41 1.5E-45 382.2 24.3 220 1038-1267 5-241 (289)
348 PRK11264 putative amino-acid A 100.0 1.4E-40 3E-45 372.7 26.4 219 374-602 3-235 (250)
349 PRK10253 iron-enterobactin tra 100.0 6.5E-41 1.4E-45 377.7 23.8 214 1039-1266 7-233 (265)
350 PRK13638 cbiO cobalt transport 100.0 7.7E-41 1.7E-45 378.4 24.4 214 1040-1267 2-226 (271)
351 cd03265 ABC_DrrA DrrA is the A 100.0 5.3E-41 1.1E-45 368.5 22.4 213 375-598 1-219 (220)
352 PRK14266 phosphate ABC transpo 100.0 9E-41 1.9E-45 374.1 24.7 225 1039-1273 3-241 (250)
353 cd03300 ABC_PotA_N PotA is an 100.0 4.5E-41 9.8E-46 371.7 22.0 212 1040-1267 1-221 (232)
354 PRK14270 phosphate ABC transpo 100.0 8.7E-41 1.9E-45 374.3 24.5 219 1039-1267 4-236 (251)
355 PRK14271 phosphate ABC transpo 100.0 1.1E-40 2.3E-45 377.0 25.5 220 1039-1268 21-253 (276)
356 PRK14248 phosphate ABC transpo 100.0 7.9E-41 1.7E-45 377.9 24.3 220 374-603 21-255 (268)
357 PRK14253 phosphate ABC transpo 100.0 8.7E-41 1.9E-45 374.0 24.4 222 1039-1270 3-237 (249)
358 cd03292 ABC_FtsE_transporter F 100.0 4.8E-41 1E-45 367.6 21.7 203 1040-1255 1-214 (214)
359 PRK11614 livF leucine/isoleuci 100.0 7.5E-41 1.6E-45 371.6 23.6 218 374-600 5-226 (237)
360 PRK14236 phosphate transporter 100.0 9.5E-41 2.1E-45 377.6 24.7 220 372-601 23-257 (272)
361 PRK14254 phosphate ABC transpo 100.0 1.2E-40 2.7E-45 378.0 25.7 220 1038-1267 38-270 (285)
362 PRK09473 oppD oligopeptide tra 100.0 1E-40 2.3E-45 384.6 25.4 229 1039-1275 12-260 (330)
363 PRK13641 cbiO cobalt transport 100.0 1.2E-40 2.7E-45 379.1 25.7 221 374-601 2-235 (287)
364 PRK13652 cbiO cobalt transport 100.0 1.3E-40 2.8E-45 377.3 25.6 218 375-601 4-228 (277)
365 cd03235 ABC_Metallic_Cations A 100.0 3.4E-41 7.3E-46 368.2 20.1 199 1041-1259 1-213 (213)
366 PRK09493 glnQ glutamine ABC tr 100.0 7.6E-41 1.6E-45 372.3 23.3 217 375-601 2-226 (240)
367 PRK13632 cbiO cobalt transport 100.0 1.1E-40 2.5E-45 376.7 25.0 220 374-601 7-232 (271)
368 PRK15112 antimicrobial peptide 100.0 1.3E-40 2.9E-45 375.3 25.5 230 1039-1279 4-253 (267)
369 PRK13649 cbiO cobalt transport 100.0 1.2E-40 2.6E-45 378.9 25.2 220 375-601 3-235 (280)
370 PRK14241 phosphate transporter 100.0 8.4E-41 1.8E-45 375.8 23.6 219 1039-1267 4-243 (258)
371 TIGR00968 3a0106s01 sulfate AB 100.0 1.1E-40 2.4E-45 369.6 24.2 212 1040-1267 1-221 (237)
372 PRK13633 cobalt transporter AT 100.0 8.5E-41 1.8E-45 379.3 23.7 217 374-601 4-234 (280)
373 PRK14251 phosphate ABC transpo 100.0 6.8E-41 1.5E-45 375.3 22.6 224 374-607 4-242 (251)
374 PRK14275 phosphate ABC transpo 100.0 1.1E-40 2.3E-45 379.1 24.4 226 1039-1274 39-278 (286)
375 PRK13644 cbiO cobalt transport 100.0 1.5E-40 3.2E-45 375.8 25.5 218 375-601 2-225 (274)
376 cd03298 ABC_ThiQ_thiamine_tran 100.0 9.9E-41 2.2E-45 364.0 23.2 202 1040-1259 1-211 (211)
377 PRK14256 phosphate ABC transpo 100.0 1.2E-40 2.7E-45 373.3 24.6 224 373-606 3-242 (252)
378 TIGR03411 urea_trans_UrtD urea 100.0 1.3E-40 2.8E-45 371.1 24.7 221 375-600 3-231 (242)
379 PRK14245 phosphate ABC transpo 100.0 7E-41 1.5E-45 374.8 22.6 222 374-603 3-237 (250)
380 cd03268 ABC_BcrA_bacitracin_re 100.0 7.1E-41 1.5E-45 364.3 21.9 203 375-593 1-208 (208)
381 PRK09473 oppD oligopeptide tra 100.0 7.4E-41 1.6E-45 385.8 23.4 231 374-610 12-261 (330)
382 TIGR03873 F420-0_ABC_ATP propo 100.0 9.7E-41 2.1E-45 374.8 23.7 213 1040-1266 2-226 (256)
383 cd03290 ABCC_SUR1_N The SUR do 100.0 1.6E-40 3.4E-45 364.2 24.7 210 1041-1254 2-218 (218)
384 PRK14239 phosphate transporter 100.0 1E-40 2.2E-45 374.3 23.7 220 374-603 5-239 (252)
385 PRK10575 iron-hydroxamate tran 100.0 8.1E-41 1.8E-45 376.9 23.0 213 374-600 11-237 (265)
386 PRK14263 phosphate ABC transpo 100.0 1.5E-40 3.2E-45 373.1 24.9 224 1039-1272 8-251 (261)
387 PRK14243 phosphate transporter 100.0 1.6E-40 3.6E-45 373.9 25.4 220 374-603 10-251 (264)
388 PRK13639 cbiO cobalt transport 100.0 1E-40 2.2E-45 377.7 23.8 215 1040-1267 2-227 (275)
389 PRK14237 phosphate transporter 100.0 1.3E-40 2.8E-45 375.5 24.6 220 372-601 18-252 (267)
390 PRK10895 lipopolysaccharide AB 100.0 7.5E-41 1.6E-45 372.6 22.4 218 1039-1266 3-226 (241)
391 PRK13640 cbiO cobalt transport 100.0 1.4E-40 3E-45 377.6 24.9 220 374-601 5-233 (282)
392 PRK14272 phosphate ABC transpo 100.0 1E-40 2.3E-45 374.2 23.5 226 1039-1274 4-244 (252)
393 PRK13645 cbiO cobalt transport 100.0 1.6E-40 3.5E-45 379.1 25.4 223 372-601 4-241 (289)
394 TIGR02211 LolD_lipo_ex lipopro 100.0 8E-41 1.7E-45 367.6 22.0 209 375-590 2-220 (221)
395 PRK10584 putative ABC transpor 100.0 1.4E-40 3E-45 367.4 23.9 209 1039-1258 6-227 (228)
396 PRK10619 histidine/lysine/argi 100.0 1.1E-40 2.4E-45 374.5 23.6 219 373-601 4-242 (257)
397 PRK10895 lipopolysaccharide AB 100.0 1.1E-40 2.4E-45 371.2 23.4 218 374-601 3-227 (241)
398 PRK14249 phosphate ABC transpo 100.0 1.8E-40 3.9E-45 371.7 25.2 219 374-602 4-237 (251)
399 PRK14246 phosphate ABC transpo 100.0 1.7E-40 3.7E-45 371.7 24.9 228 1039-1276 10-251 (257)
400 PRK10771 thiQ thiamine transpo 100.0 2.2E-40 4.7E-45 366.5 25.3 210 1040-1267 2-220 (232)
401 TIGR03522 GldA_ABC_ATP gliding 100.0 1.1E-40 2.4E-45 381.7 23.8 213 1040-1267 3-222 (301)
402 PRK13536 nodulation factor exp 100.0 1.2E-40 2.5E-45 384.8 23.8 214 1039-1267 41-262 (340)
403 PRK14238 phosphate transporter 100.0 1.5E-40 3.4E-45 375.4 24.3 221 374-604 24-259 (271)
404 PRK14258 phosphate ABC transpo 100.0 1.7E-40 3.7E-45 373.5 24.5 223 1038-1270 6-249 (261)
405 PRK10908 cell division protein 100.0 1.3E-40 2.8E-45 365.9 22.9 205 1040-1257 2-217 (222)
406 PRK14252 phosphate ABC transpo 100.0 2.1E-40 4.5E-45 373.9 25.1 224 1037-1270 14-253 (265)
407 PRK11300 livG leucine/isoleuci 100.0 1.6E-40 3.5E-45 373.3 24.2 221 1039-1267 5-244 (255)
408 PRK14261 phosphate ABC transpo 100.0 1.5E-40 3.2E-45 372.9 23.6 225 374-608 6-245 (253)
409 PRK14244 phosphate ABC transpo 100.0 7.6E-41 1.7E-45 374.7 21.2 222 375-606 6-243 (251)
410 cd03293 ABC_NrtD_SsuB_transpor 100.0 7.3E-41 1.6E-45 367.3 20.4 209 375-595 1-218 (220)
411 cd03301 ABC_MalK_N The N-termi 100.0 8.7E-41 1.9E-45 365.1 20.7 207 375-593 1-213 (213)
412 TIGR01288 nodI ATP-binding ABC 100.0 1.3E-40 2.7E-45 382.0 23.0 217 374-601 4-225 (303)
413 PRK13536 nodulation factor exp 100.0 1.3E-40 2.7E-45 384.5 23.2 217 374-601 41-262 (340)
414 TIGR03410 urea_trans_UrtE urea 100.0 1.3E-40 2.7E-45 368.2 22.2 214 375-598 1-219 (230)
415 PRK10247 putative ABC transpor 100.0 1.4E-40 3.1E-45 365.7 22.5 211 1039-1262 7-223 (225)
416 PRK11231 fecE iron-dicitrate t 100.0 1.5E-40 3.3E-45 373.0 23.0 212 375-600 3-227 (255)
417 cd03257 ABC_NikE_OppD_transpor 100.0 2.2E-40 4.8E-45 366.2 23.9 213 1040-1259 2-228 (228)
418 PRK11247 ssuB aliphatic sulfon 100.0 1.8E-40 3.9E-45 370.2 23.3 205 373-596 11-219 (257)
419 cd03269 ABC_putative_ATPase Th 100.0 1.3E-40 2.7E-45 362.9 21.6 202 1040-1259 1-210 (210)
420 PRK14270 phosphate ABC transpo 100.0 2.3E-40 5E-45 370.8 24.2 220 374-603 4-238 (251)
421 PRK15093 antimicrobial peptide 100.0 2.4E-40 5.3E-45 382.8 25.2 229 1039-1275 3-257 (330)
422 PRK14255 phosphate ABC transpo 100.0 1.9E-40 4.1E-45 372.0 23.5 223 1039-1271 5-241 (252)
423 cd03246 ABCC_Protease_Secretio 100.0 1.5E-40 3.3E-45 350.0 21.1 172 1040-1255 1-173 (173)
424 PRK14262 phosphate ABC transpo 100.0 2E-40 4.3E-45 371.3 23.4 219 374-602 3-236 (250)
425 PRK14265 phosphate ABC transpo 100.0 3.4E-40 7.4E-45 372.9 25.5 221 1039-1269 20-261 (274)
426 cd03257 ABC_NikE_OppD_transpor 100.0 1.6E-40 3.6E-45 367.2 22.3 213 375-593 2-228 (228)
427 PRK14253 phosphate ABC transpo 100.0 3.1E-40 6.6E-45 369.6 24.6 218 374-601 3-234 (249)
428 PRK11124 artP arginine transpo 100.0 3.6E-40 7.8E-45 367.4 25.0 216 375-600 3-230 (242)
429 PRK13638 cbiO cobalt transport 100.0 2E-40 4.4E-45 374.9 23.3 217 375-601 2-226 (271)
430 PRK11300 livG leucine/isoleuci 100.0 2.6E-40 5.6E-45 371.7 24.0 223 374-601 5-244 (255)
431 PRK11701 phnK phosphonate C-P 100.0 5.2E-40 1.1E-44 369.3 26.4 228 1039-1276 6-251 (258)
432 PRK14271 phosphate ABC transpo 100.0 4.5E-40 9.7E-45 372.0 26.0 222 373-602 20-253 (276)
433 PRK13548 hmuV hemin importer A 100.0 3.6E-40 7.8E-45 369.9 24.9 216 375-600 3-230 (258)
434 cd03299 ABC_ModC_like Archeal 100.0 3.5E-40 7.6E-45 365.1 24.4 212 1040-1268 1-221 (235)
435 PRK13648 cbiO cobalt transport 100.0 3.5E-40 7.6E-45 372.6 24.8 220 374-601 7-232 (269)
436 TIGR03522 GldA_ABC_ATP gliding 100.0 1.8E-40 4E-45 380.0 22.7 216 375-601 3-222 (301)
437 TIGR02673 FtsE cell division A 100.0 1.3E-40 2.9E-45 364.0 20.6 201 375-588 2-214 (214)
438 cd03247 ABCC_cytochrome_bd The 100.0 1.8E-40 3.9E-45 351.3 20.9 178 375-593 1-178 (178)
439 PRK11144 modC molybdate transp 100.0 2.9E-40 6.2E-45 385.2 24.6 212 1040-1269 2-221 (352)
440 PRK10247 putative ABC transpor 100.0 2.6E-40 5.7E-45 363.6 22.6 211 374-596 7-223 (225)
441 cd03225 ABC_cobalt_CbiO_domain 100.0 1.4E-40 3.1E-45 362.9 20.3 205 376-588 1-211 (211)
442 PRK15093 antimicrobial peptide 100.0 3E-40 6.6E-45 382.0 24.2 230 374-610 3-258 (330)
443 PRK14264 phosphate ABC transpo 100.0 4.9E-40 1.1E-44 376.8 25.6 220 1038-1267 44-290 (305)
444 PRK13547 hmuV hemin importer A 100.0 4.1E-40 9E-45 370.4 24.5 213 1040-1266 2-244 (272)
445 cd03262 ABC_HisP_GlnQ_permease 100.0 2E-40 4.4E-45 362.4 21.4 202 1040-1255 1-213 (213)
446 PRK11701 phnK phosphonate C-P 100.0 4.4E-40 9.4E-45 370.0 24.6 225 374-608 6-249 (258)
447 PRK14260 phosphate ABC transpo 100.0 3.1E-40 6.8E-45 371.1 23.5 220 373-602 6-245 (259)
448 PRK14254 phosphate ABC transpo 100.0 5.1E-40 1.1E-44 373.0 25.3 220 372-601 37-270 (285)
449 PRK14275 phosphate ABC transpo 100.0 2.5E-40 5.5E-45 376.0 22.8 225 373-607 38-277 (286)
450 PRK10253 iron-enterobactin tra 100.0 3.4E-40 7.4E-45 371.8 23.5 214 373-600 6-233 (265)
451 cd03292 ABC_FtsE_transporter F 100.0 2E-40 4.4E-45 362.7 21.0 206 375-589 1-214 (214)
452 cd03235 ABC_Metallic_Cations A 100.0 1.3E-40 2.9E-45 363.5 19.5 202 376-593 1-213 (213)
453 COG1123 ATPase components of v 100.0 2.9E-40 6.2E-45 386.0 23.4 235 373-611 279-530 (539)
454 TIGR01277 thiQ thiamine ABC tr 100.0 4.4E-40 9.6E-45 359.1 23.5 203 1040-1260 1-212 (213)
455 cd03290 ABCC_SUR1_N The SUR do 100.0 5.9E-40 1.3E-44 359.6 24.3 210 376-588 2-218 (218)
456 TIGR01188 drrA daunorubicin re 100.0 2.4E-40 5.1E-45 379.6 22.0 201 1055-1267 6-214 (302)
457 PRK14266 phosphate ABC transpo 100.0 6E-40 1.3E-44 367.5 24.6 223 374-606 3-240 (250)
458 PRK14241 phosphate transporter 100.0 4.8E-40 1E-44 369.6 23.7 218 374-601 4-243 (258)
459 PRK14252 phosphate ABC transpo 100.0 6.3E-40 1.4E-44 369.9 24.7 225 372-606 14-255 (265)
460 PRK13639 cbiO cobalt transport 100.0 4.8E-40 1E-44 372.2 23.7 218 375-601 2-227 (275)
461 PRK10584 putative ABC transpor 100.0 4.5E-40 9.7E-45 363.3 22.9 212 374-592 6-227 (228)
462 PRK14272 phosphate ABC transpo 100.0 5.4E-40 1.2E-44 368.4 23.7 225 374-606 4-242 (252)
463 COG0411 LivG ABC-type branched 100.0 1.6E-40 3.4E-45 346.4 17.8 221 375-602 5-241 (250)
464 PRK09984 phosphonate/organopho 100.0 8.3E-40 1.8E-44 368.6 25.1 222 1039-1277 4-250 (262)
465 PRK11144 modC molybdate transp 100.0 4.5E-40 9.7E-45 383.6 23.5 212 375-603 2-221 (352)
466 TIGR03873 F420-0_ABC_ATP propo 100.0 4.4E-40 9.5E-45 369.5 22.5 221 375-600 2-226 (256)
467 COG1131 CcmA ABC-type multidru 100.0 3E-40 6.5E-45 373.9 21.2 214 374-601 4-227 (293)
468 cd03269 ABC_putative_ATPase Th 100.0 2.5E-40 5.4E-45 360.5 19.8 205 375-593 1-210 (210)
469 TIGR01978 sufC FeS assembly AT 100.0 4.6E-40 9.9E-45 367.2 22.4 215 1040-1266 1-234 (243)
470 PRK10908 cell division protein 100.0 9.6E-40 2.1E-44 359.0 24.6 208 375-591 2-217 (222)
471 PRK14263 phosphate ABC transpo 100.0 7.1E-40 1.5E-44 367.6 23.9 220 374-603 8-248 (261)
472 cd03298 ABC_ThiQ_thiamine_tran 100.0 5.8E-40 1.3E-44 357.9 22.6 201 375-593 1-211 (211)
473 COG0410 LivF ABC-type branched 100.0 6.7E-40 1.5E-44 339.1 21.5 220 1039-1267 3-227 (237)
474 cd03300 ABC_PotA_N PotA is an 100.0 4.4E-40 9.5E-45 363.9 21.6 215 375-601 1-221 (232)
475 PRK14265 phosphate ABC transpo 100.0 1.6E-39 3.5E-44 367.4 26.6 221 373-603 19-261 (274)
476 PRK10771 thiQ thiamine transpo 100.0 1E-39 2.3E-44 361.1 24.5 209 375-601 2-220 (232)
477 PRK14258 phosphate ABC transpo 100.0 7.1E-40 1.5E-44 368.4 23.5 221 373-603 6-248 (261)
478 PRK10418 nikD nickel transport 100.0 9.7E-40 2.1E-44 366.0 24.4 227 1039-1279 4-244 (254)
479 PRK13547 hmuV hemin importer A 100.0 7.2E-40 1.6E-44 368.5 23.3 221 375-600 2-244 (272)
480 cd03246 ABCC_Protease_Secretio 100.0 5.5E-40 1.2E-44 345.7 20.9 172 375-589 1-173 (173)
481 cd03262 ABC_HisP_GlnQ_permease 100.0 6.9E-40 1.5E-44 358.1 22.2 205 375-589 1-213 (213)
482 TIGR00968 3a0106s01 sulfate AB 100.0 9.2E-40 2E-44 362.3 23.5 215 375-601 1-221 (237)
483 PRK15112 antimicrobial peptide 100.0 1E-39 2.3E-44 368.1 24.3 222 374-602 4-241 (267)
484 COG1137 YhbG ABC-type (unclass 100.0 5.8E-41 1.3E-45 335.0 12.2 222 374-601 4-229 (243)
485 COG1131 CcmA ABC-type multidru 100.0 9.4E-40 2E-44 369.9 23.3 215 1039-1267 4-227 (293)
486 PRK14246 phosphate ABC transpo 100.0 9.5E-40 2.1E-44 365.7 23.2 227 373-609 9-250 (257)
487 PRK10419 nikE nickel transport 100.0 1E-39 2.3E-44 368.0 23.5 229 1040-1276 4-250 (268)
488 PRK14255 phosphate ABC transpo 100.0 1.1E-39 2.4E-44 365.8 23.4 220 374-603 5-239 (252)
489 PRK11248 tauB taurine transpor 100.0 8.6E-40 1.9E-44 365.6 22.5 203 1040-1261 2-215 (255)
490 cd03234 ABCG_White The White s 100.0 6.8E-40 1.5E-44 361.0 20.9 214 375-593 4-226 (226)
491 TIGR02142 modC_ABC molybdenum 100.0 1.2E-39 2.6E-44 380.7 24.1 212 1044-1272 4-227 (354)
492 COG4175 ProV ABC-type proline/ 100.0 5.1E-40 1.1E-44 349.6 18.8 225 1039-1274 4-262 (386)
493 PRK00349 uvrA excinuclease ABC 100.0 6.4E-39 1.4E-43 406.0 32.3 104 1168-1271 818-932 (943)
494 COG4555 NatA ABC-type Na+ tran 100.0 6.8E-40 1.5E-44 327.8 18.4 214 1040-1267 2-223 (245)
495 PRK09984 phosphonate/organopho 100.0 1.8E-39 4E-44 365.8 24.4 220 374-598 4-240 (262)
496 TIGR01188 drrA daunorubicin re 100.0 6.9E-40 1.5E-44 375.7 21.2 204 390-601 6-214 (302)
497 cd03234 ABCG_White The White s 100.0 7.4E-40 1.6E-44 360.8 20.4 211 1040-1259 4-226 (226)
498 TIGR01978 sufC FeS assembly AT 100.0 1.3E-39 2.9E-44 363.5 22.3 215 375-599 1-233 (243)
499 TIGR02142 modC_ABC molybdenum 100.0 1.6E-39 3.4E-44 379.8 23.8 216 379-606 4-227 (354)
500 TIGR01277 thiQ thiamine ABC tr 100.0 1.8E-39 3.9E-44 354.3 22.7 202 375-594 1-212 (213)
No 1
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.5e-217 Score=1986.28 Aligned_cols=1215 Identities=57% Similarity=0.936 Sum_probs=1116.6
Q ss_pred chhHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 35 KVPFYKLFAFADKQDAVLMIVGTISAIGSGLAHPFMTLIFGHLINSFGSSDRSHVVHEVSKVAVKFLYLAAGTGIAAFLQ 114 (1283)
Q Consensus 35 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (1283)
..++.++|+|..+.++.+++++.+++++.++..|++.+++|+++|.+.........+.+..+++.+++++++.++..|++
T Consensus 12 ~~~~~~lf~~a~~~D~~Lm~~G~i~a~~~G~~~P~~~ii~g~~~~~~~~~~~~~~~~~~~~~~l~~~~lg~~~~~~~~~q 91 (1228)
T KOG0055|consen 12 TVSFFKLFRFADRFDYLLMILGSIGAIAHGLGLPLMSIIFGKLTDVLGDNTNKIASSEVSKVALYFVYLGVGVFISGFIQ 91 (1228)
T ss_pred ccchHHheeccchhhHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56899999999999999999999999999999999999999999988654321222456677888999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCccHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000789 115 VSCWMVTGERQATRIRGLYLKTILRQDIGFFDTETTTGEVIGRMSGDTILIQEAMGEKVGKFIQLMSTFFGGFVVALARG 194 (1283)
Q Consensus 115 ~~~~~~~~~~~~~~lR~~~~~~ll~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 194 (1283)
..||.+.++|...++|.++++.++|++++|||.+ .+|++.+++++|++.|++.+++.+..+++.+.++++++++.|+..
T Consensus 92 ~~c~~~~geRq~~riR~~yl~~iLrQdi~~fD~~-~~g~~~~~l~~d~~~I~d~~geKvg~~i~~~~~fi~g~ii~F~~~ 170 (1228)
T KOG0055|consen 92 VSCWMRTGERQTARIRSKYLKAILRQDIGWFDTN-STGELVTRLSDDIELIQDAIGEKVGNFIQLLATFIAGFVIGFYYG 170 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCccceeecc-cccceEEEecCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999987 779999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHHHHHHHHH
Q 000789 195 WFLALVLLACLPAIVIAGGSMALIMSKMSSRGQIAYSEAGTVVEQTVSGIRTVSSFTGEKQAIEKYNNKLQVAYRAAVQQ 274 (1283)
Q Consensus 195 ~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~ 274 (1283)
|+|+++++.+.|++++....+.+.+.+...+.+++++++.+.++|+++++|||.+|+.|+.+.+||.+.++..++...+.
T Consensus 171 W~Ltlv~l~~~Pli~~~g~~~a~~~~~~t~ke~~~ya~Ag~iaEe~i~~iRTV~af~gq~~e~~ry~~~L~~~~k~gi~~ 250 (1228)
T KOG0055|consen 171 WKLTLVMLSFIPLIAIAGGLLARFLSKLTEKEQEAYAKAGSIAEEVISSIRTVYAFNGEKKEIERYSKALENALKFGIKK 250 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Q 000789 275 GMVSGIGLGVLMLTVIGTYGLAVWYGSKLIIEKGYNGGTVINVIMAIMTGGMSLGQTSPCLNAFAGGQAAAYKMFETIKR 354 (1283)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~t~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~ 354 (1283)
..+.++..+++.++.+..+++.+|+|+.++..+..++|.++..+.+++.+...+++..|.+..+..+.+|+.+|++.++.
T Consensus 251 g~~~G~~~G~~~~~~~~~~a~~~WyG~~li~~~~~~~g~v~~v~~~vl~g~~sLgqa~p~l~~f~~a~~aa~~I~~~i~~ 330 (1228)
T KOG0055|consen 251 GLFKGLGLGFTFFLLFASYALAFWYGSTLILNGGYNGGDVITVFFSVLIGGMSLGQASPHLSAFAKARAAAYRIFETIDR 330 (1228)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeehhhhhhhhhccccchHHHhccccchHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCcccCccccEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceE
Q 000789 355 KPKIDPYDTSGITLEKIEGEIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEV 434 (1283)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i 434 (1283)
.|++++...++......+|+|+|+||+|+||.+++.++|+|+||+|++|+++||||||||||||+++||.|||+|++|+|
T Consensus 331 ~~~i~~~~~~~~~~~~~~g~ief~nV~FsYPsRpdv~Il~g~sl~i~~G~~valVG~SGsGKST~i~LL~RfydP~~G~V 410 (1228)
T KOG0055|consen 331 KPSIDPYSKGGRVLSSIKGEIEFRNVCFSYPSRPDVKILKGVSLKIPSGQTVALVGPSGSGKSTLIQLLARFYDPTSGEV 410 (1228)
T ss_pred CCCCCcccccCCcccccccceEEEEEEecCCCCCcchhhCCeEEEeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCCceE
Confidence 98887654333345567899999999999999998999999999999999999999999999999999999999999999
Q ss_pred EECCcccCCCCHHHHhcccEEEccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCC
Q 000789 435 LIDGIDIKKLQLKWIREKIGLVSQEPILFATSLRENIAYGKENATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQL 514 (1283)
Q Consensus 435 ~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~L 514 (1283)
++||.|+++++.+|+|++||.|+|+|.||++||+|||+||+|+++.+++.+||+.+++++||..+|+||||.+||+|.+|
T Consensus 411 ~idG~di~~~~~~~lr~~iglV~QePvlF~~tI~eNI~~G~~dat~~~i~~a~k~ana~~fi~~lp~g~~T~vge~g~qL 490 (1228)
T KOG0055|consen 411 LIDGEDIRNLNLKWLRSQIGLVSQEPVLFATTIRENIRYGKPDATREEIEEAAKAANAHDFILKLPDGYDTLVGERGVQL 490 (1228)
T ss_pred EEcCccchhcchHHHHhhcCeeeechhhhcccHHHHHhcCCCcccHHHHHHHHHHccHHHHHHhhHHhhcccccCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhccCEEEEEeCCEEeEecC
Q 000789 515 SGGQKQRIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMTSRTTVVVAHRLTTIRNADLIAVVHQGKIVEKGT 594 (1283)
Q Consensus 515 SgGqkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~ 594 (1283)
||||||||||||||++||+||||||||||||+++|+.++++|+++++|||+|+|||||+++++||+|+||++|+|+|.|+
T Consensus 491 SGGQKQRIAIARalv~~P~ILLLDEaTSaLD~~se~~Vq~ALd~~~~grTTivVaHRLStIrnaD~I~v~~~G~IvE~G~ 570 (1228)
T KOG0055|consen 491 SGGQKQRIAIARALVRNPKILLLDEATSALDAESERVVQEALDKASKGRTTIVVAHRLSTIRNADKIAVMEEGKIVEQGT 570 (1228)
T ss_pred ChHHHHHHHHHHHHHhCCCEEEecCcccccCHHHHHHHHHHHHHhhcCCeEEEEeeehhhhhccCEEEEEECCEEEEecC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHhcCCCChhHHHHHHhhcCchhhhhhhccccccCchhhhhhhhhcCCCCCCccccccccccCCCCCCccccccCCCC
Q 000789 595 HDELIKDPEGPYTQLVRLQEGSKEAEDALATDADKLDSSFDILDKAMTRSGSRGESMRRSISRHSSGSRHSFGFTYGVPG 674 (1283)
Q Consensus 595 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (1283)
|+||++. +|.|.+|++.|......+. .+++.+..+ . ... .. +......+..+.+ ..... .
T Consensus 571 h~ELi~~-~G~Y~~lv~~Q~~~~~~~~-~~~~~~~~~----~--~~~--s~-~~s~~~~~~~~~~--~~~~~------~- 630 (1228)
T KOG0055|consen 571 HDELIAL-GGIYSSLVRLQELEKAAED-EEEEESLKE----E--RSR--SL-KSSSSSPSLSRGS--NRSNL------L- 630 (1228)
T ss_pred HHHHHhc-cchHHHHHHHHhhhhhhhc-cccccchhh----h--hhh--cc-ccccccccccCCc--ccccc------c-
Confidence 9999998 5999999999876553321 000000000 0 000 00 0000000000000 00000 0
Q ss_pred CCCccccccCCCCCCCCchhhHhhhhhHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc-hhh
Q 000789 675 PINVFETEEGDQGGAERTPLMIEKRQKLSMRRLAYLNKPEFPVLLIGSIAAGIHGVIFPIFGLLLSSSIRMFFEPE-DKL 753 (1283)
Q Consensus 675 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 753 (1283)
....+. +...+.. .....+.++++++++.+|+|+++++|++++++.|+.+|++++.++..+..+..++ +..
T Consensus 631 ----~~~~~~-e~~~~~~---~~~~~~~s~~~i~k~~~pe~~~l~lG~i~a~i~G~~~P~fa~~~s~~~~~f~~~~~~~~ 702 (1228)
T KOG0055|consen 631 ----SVKPEG-EDPEEPV---SEEDEKVSFWRIFKLNKPEWPYLLLGSLGAAIRGATYPLFAYVFSQVLEAFYPPDDDEL 702 (1228)
T ss_pred ----cccccc-ccccccc---ccccccccHHHHHHhccchhHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCChHHH
Confidence 000000 0000000 0111456789999999999999999999999999999999999999999988553 445
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChhHHHHHHhhhHHHHHHH
Q 000789 754 RKDSRFWALIYLVLGIINLIAVPFQNYFFGVAGGKLIRRIRSLTFEKVVHQEISWFDDPANSSGSVGARLSTDASTIRSL 833 (1283)
Q Consensus 754 ~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~ff~~~~~~~G~l~~rl~~D~~~i~~~ 833 (1283)
......|.++|++++++.+++.+++.|++..++++++.++|..+|+++++++++|||+++|+ |.+.+|+.+|...++..
T Consensus 703 ~~~~~~~al~f~~l~~~~~i~~~~q~~~f~~~ge~Lt~R~R~~~F~~ll~qd~~wFD~~~ns-g~l~~RLa~Da~~vr~~ 781 (1228)
T KOG0055|consen 703 KREVRAWALIFLGLGIVSGITNFLQHYFFGIAGEKLTKRLRSMMFRALLRQEVGWFDDPENS-GALSSRLATDASNVRAA 781 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCccc-hHHHHHHhcchHHHHHH
Confidence 55556699999999999999999999999999999999999999999999999999999999 99999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHH
Q 000789 834 VGDSLALVVQNIATIAAGLIIAFTANWILAFVILAVSPLMLVQGYTQTKFMKGFSADAKLMYEEASQVANDAVGSIRTVA 913 (1283)
Q Consensus 834 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIr 913 (1283)
+.+.+..+++.+.+++.+++++|+++|+++++++++.|++++..+.+.+++.....+.+..+.++.+.+.|++++++||+
T Consensus 782 v~~rl~~vv~~~~~~~~~iiiaf~~~W~lalv~la~~Pll~~~~~~~~~~~~~~~~~~~~~~~ea~~iA~eai~NIrTV~ 861 (1228)
T KOG0055|consen 782 VGDRLSLVVQNIAAVIIGIIIAFIYGWRLALVVLATFPLLILSGYLQKKFLKGFSKDDKKAYEEASKIAIEAVSNIRTVA 861 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhccHHHHHHHHHHHHhcHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHH
Q 000789 914 SFCSEEKVMDLYEKKCEGPLKNGVRRGILSGAGFGFSFLVLYCTNAFCFYIGSVLVEHGKATFGQVFKVFFALTISALGV 993 (1283)
Q Consensus 914 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~g~~~~~~~~~~~~~~~~~~~~~ 993 (1283)
+|+.|+++.+.|.+.++...+...+++++.++.+++++.++++.+++++|+|.+++.+|.+++.+++.++..+.+....+
T Consensus 862 al~~e~~~~~~y~~~l~~p~~~~~~~~~i~gl~f~~sqs~~~~~~A~~f~~G~~Li~~g~~~~~~~~~vf~~l~~ta~~~ 941 (1228)
T KOG0055|consen 862 ALCAEEKFMELYKEELEKPRKSSFKRGLISGLGFGFSQSLLFFVYALSFWYGARLISNGEMTFEDVFRVFMALSFTAMAL 941 (1228)
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhcCCcCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCcCCccCCCcccEEEEEEEEECCCCCCcccccceeEEecCCCEEEE
Q 000789 994 SQTSAMAPDTTKAKDSAASIFEILDSKPKIDSSKDEGMTLSSVGGAIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVAL 1073 (1283)
Q Consensus 994 ~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaI 1073 (1283)
++...+.|++.++..|+.+++++++++|..+...+.+...+..+|+|+|+||+|+||++|+.+||+|+||+|++||++||
T Consensus 942 ~~~~s~~Pd~~ka~~Aa~~iF~i~dr~~~i~~~~~~~~~~~~~~G~I~~~~V~F~YPsRP~~~Il~~l~l~i~~GqTvAL 1021 (1228)
T KOG0055|consen 942 GQASSYAPDISKAKIAAGSIFEILDRKPTIDPDSTSGGKLPNVKGDIEFRNVSFAYPTRPDVPVLNNLSLSIRAGQTVAL 1021 (1228)
T ss_pred HHHHhhCcHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCccccceeEEEEeeeEeeCCCCCCchhhcCCcEEecCCCEEEE
Confidence 99999999999999999999999999997765544444456678999999999999999999999999999999999999
Q ss_pred EcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHhcceEEEccCCCCChhhHHHHHhcCCCCCCCHHHHHHHH
Q 000789 1074 VGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMGLVSQEPVLFNETIRTNIAYGKQGGATEEEIIAAT 1153 (1283)
Q Consensus 1074 VG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~~~~sd~ei~~al 1153 (1283)
||||||||||++.||.|||||++|.|.|||+||+++++++||++|++|+|||.||++||||||.||.. +++++||.+|+
T Consensus 1022 VG~SGsGKSTvI~LLeRfYdp~~G~V~IDg~dik~lnl~~LR~~i~lVsQEP~LF~~TIrENI~YG~~-~vs~~eIi~Aa 1100 (1228)
T KOG0055|consen 1022 VGPSGSGKSTVISLLERFYDPDAGKVKIDGVDIKDLNLKWLRKQIGLVSQEPVLFNGTIRENIAYGSE-EVSEEEIIEAA 1100 (1228)
T ss_pred ECCCCCCHHHHHHHHHHhcCCCCCeEEECCcccccCCHHHHHHhcceeccCchhhcccHHHHHhccCC-CCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999943 49999999999
Q ss_pred HHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcCCceEEE
Q 000789 1154 EASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVV 1233 (1283)
Q Consensus 1154 ~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~ 1233 (1283)
+.|++|+||.+||+||||.|||+|.+||||||||||||||++||||||||||||||||+++|+.||++|++.+.+||+|+
T Consensus 1101 k~ANaH~FI~sLP~GyDT~vGerG~QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a~~gRT~Iv 1180 (1228)
T KOG0055|consen 1101 KLANAHNFISSLPQGYDTRVGERGVQLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRAMEGRTTIV 1180 (1228)
T ss_pred HHhhhHHHHhcCcCcccCccCcccCcCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHhhcCCcEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCchHHhhcCEEEEEeCCEEEEecChHHHHhccCchhHHHHHHhhc
Q 000789 1234 VAHRLTTIKNADIIAVVKNGVIAEQGSHDALMKITDGAYASLVALHVS 1281 (1283)
Q Consensus 1234 IaHrl~ti~~~D~I~vl~~G~Ive~Gt~~eLl~~~~g~y~~L~~~~~~ 1281 (1283)
|||||+||++||.|+|+++|+|+|+|||+||+++ +|.|++|++.|..
T Consensus 1181 IAHRLSTIqnaD~I~Vi~~G~VvE~GtH~~L~~~-~G~Y~~Lv~~q~~ 1227 (1228)
T KOG0055|consen 1181 IAHRLSTIQNADVIAVLKNGKVVEQGTHDELLAK-RGIYFRLVQLQSS 1227 (1228)
T ss_pred EecchhhhhcCCEEEEEECCEEEecccHHHHHhC-CCchHHHhhhccC
Confidence 9999999999999999999999999999999994 9999999999864
No 2
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=1.4e-174 Score=1732.13 Aligned_cols=1225 Identities=30% Similarity=0.513 Sum_probs=1021.0
Q ss_pred cchhHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 34 QKVPFYKLFAFADKQDAVLMIVGTISAIGSGLAHPFMTLIFGHLINSFGSSDRSHVVHEVSKVAVKFLYLAAGTGIAAFL 113 (1283)
Q Consensus 34 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (1283)
++.++.++|+|..+.++.+++++++++++.+++.|++|++++.++|.+...+ .+..+++++++++++.+++.++
T Consensus 43 ~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~p~~~~i~g~iid~~~~~~------~~~~~~~~~~~~~i~~~~~~~~ 116 (1466)
T PTZ00265 43 QKIPFFLPFKCLPASHRKLLGVSFVCATISGGTLPFFVSVFGVIMKNMNLGE------NVNDIIFSLVLIGIFQFILSFI 116 (1466)
T ss_pred ccccHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc------hHHHHHHHHHHHHHHHHHHHHH
Confidence 4567999999998888888899999999999999999999999999764221 1222345566667778889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCccHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 114 QVSCWMVTGERQATRIRGLYLKTILRQDIGFFDTETTTGEVIGRMSGDTILIQEAMGEKVGKFIQLMSTFFGGFVVALAR 193 (1283)
Q Consensus 114 ~~~~~~~~~~~~~~~lR~~~~~~ll~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 193 (1283)
+.+++.+.++++..++|.++|++++++|++|||+. +.|++++++++|++.+++.+...+..++..+++++++++++|++
T Consensus 117 ~~~~~~~~~~~~~~~lR~~~~~~ll~~~~~~fd~~-~~~~l~s~l~~d~~~i~~~i~~~~~~~~~~~~~~i~~~i~~~~~ 195 (1466)
T PTZ00265 117 SSFCMDVVTTKILKTLKLEFLKSVFYQDGQFHDNN-PGSKLTSDLDFYLEQVNAGIGTKFITIFTYASAFLGLYIWSLFK 195 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHcCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999986 88999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHHHHHHHH
Q 000789 194 GWFLALVLLACLPAIVIAGGSMALIMSKMSSRGQIAYSEAGTVVEQTVSGIRTVSSFTGEKQAIEKYNNKLQVAYRAAVQ 273 (1283)
Q Consensus 194 ~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~ 273 (1283)
+|.|++++++++|+++++..++.+++++..++.++..++.++.++|.++|+++||+|+.|+.+.++|.+..+.+.+...+
T Consensus 196 sw~Lalv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~~~~~f~~~~~~~~~~~~k 275 (1466)
T PTZ00265 196 NARLTLCITCVFPLIYICGVICNKKVKINKKTSLLYNNNTMSIIEEALVGIRTVVSYCGEKTILKKFNLSEKLYSKYILK 275 (1466)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhccCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999888888888889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--------CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 274 QGMVSGIGLGVLMLTVIGTYGLAVWYGSKLIIEK--------GYNGGTVINVIMAIMTGGMSLGQTSPCLNAFAGGQAAA 345 (1283)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~--------~~t~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~ 345 (1283)
...+.++..++..++.++++++++|+|++++..| .+++|.+++++++.+.....+..+.+.+..++.+.+|+
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~l~~~~G~~lv~~g~~~~~~~~~~t~g~v~~~~~~~l~~~~~l~~i~~~~~~~~~a~~a~ 355 (1466)
T PTZ00265 276 ANFMESLHIGMINGFILASYAFGFWYGTRIIISDLSNQQPNNDFHGGSVISILLGVLISMFMLTIILPNITEYMKSLEAT 355 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999998888888888889999999999999875 57899999888777776677778888899999999999
Q ss_pred HHHHHHHccCCCCCCCCCCCCcccCccccEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHc
Q 000789 346 YKMFETIKRKPKIDPYDTSGITLEKIEGEIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVER 425 (1283)
Q Consensus 346 ~ri~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~ 425 (1283)
+|++++++.+++.++.. .+...+. .+.|+|+||+|+|+++++.++|+|+||+|++||++|||||||||||||+++|+|
T Consensus 356 ~ri~~ii~~~~~~~~~~-~~~~~~~-~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~g 433 (1466)
T PTZ00265 356 NSLYEIINRKPLVENND-DGKKLKD-IKKIQFKNVRFHYDTRKDVEIYKDLNFTLTEGKTYAFVGESGCGKSTILKLIER 433 (1466)
T ss_pred HHHHHHHcCCCCCCCCC-CCccCCC-CCcEEEEEEEEEcCCCCCCceeccceEEEcCCCEEEEECCCCCCHHHHHHHHHH
Confidence 99999999877654321 1111222 247999999999986544579999999999999999999999999999999999
Q ss_pred CCCCCCceEEE-CCcccCCCCHHHHhcccEEEccCCCCCcccHHHHHhcCCC----------------------------
Q 000789 426 FYDPDAGEVLI-DGIDIKKLQLKWIREKIGLVSQEPILFATSLRENIAYGKE---------------------------- 476 (1283)
Q Consensus 426 ~~~~~~G~i~~-~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~---------------------------- 476 (1283)
+|+|++|+|++ ||+++++++..++|++||||+|+|.||++||+|||.+|.+
T Consensus 434 l~~p~~G~I~i~~g~~i~~~~~~~lr~~Ig~V~Q~~~LF~~TI~eNI~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 513 (1466)
T PTZ00265 434 LYDPTEGDIIINDSHNLKDINLKWWRSKIGVVSQDPLLFSNSIKNNIKYSLYSLKDLEALSNYYNEDGNDSQENKNKRNS 513 (1466)
T ss_pred hccCCCCeEEEeCCcchhhCCHHHHHHhccEecccccchhccHHHHHHhcCCCccccchhcccccccccccccccccccc
Confidence 99999999999 5799999999999999999999999999999999999742
Q ss_pred -----------------------------CCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHH
Q 000789 477 -----------------------------NATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARA 527 (1283)
Q Consensus 477 -----------------------------~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARa 527 (1283)
+.++++++++|+.+++++|+.++|+||||.+|++|.+|||||||||+||||
T Consensus 514 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~a~~~~~l~~~i~~lp~g~dT~vg~~g~~LSGGQkQRiaIARA 593 (1466)
T PTZ00265 514 CRAKCAGDLNDMSNTTDSNELIEMRKNYQTIKDSEVVDVSKKVLIHDFVSALPDKYETLVGSNASKLSGGQKQRISIARA 593 (1466)
T ss_pred ccccccchhhhcccccchhhhhhcccccccCCHHHHHHHHHHhCcHHHHHhCccccCceeCCCCCcCCHHHHHHHHHHHH
Confidence 245688999999999999999999999999999999999999999999999
Q ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc--CCCeEEEEecCchhhhccCEEEEEeCC------------------
Q 000789 528 ILKNPKILLLDEATSALDAESERIVQDALVKIM--TSRTTVVVAHRLTTIRNADLIAVVHQG------------------ 587 (1283)
Q Consensus 528 l~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~~d~i~vl~~G------------------ 587 (1283)
|+++|+|||||||||+||+++++.+++.|+++. +++|+|+||||+++++.||+|++|++|
T Consensus 594 ll~~P~ILlLDEpTSaLD~~se~~i~~~L~~~~~~~g~TvIiIsHrls~i~~aD~Iivl~~g~~g~~~~~~~~~~~~~~~ 673 (1466)
T PTZ00265 594 IIRNPKILILDEATSSLDNKSEYLVQKTINNLKGNENRITIIIAHRLSTIRYANTIFVLSNRERGSTVDVDIIGEDPTKD 673 (1466)
T ss_pred HhcCCCEEEEeCcccccCHHHHHHHHHHHHHHhhcCCCEEEEEeCCHHHHHhCCEEEEEeCCcccccccccccccccccc
Confidence 999999999999999999999999999999986 479999999999999999999999986
Q ss_pred -----------------------------EEeEecChhHHhcCCCChhHHHHHHhhcCchhhhhhhccccccCchhhhhh
Q 000789 588 -----------------------------KIVEKGTHDELIKDPEGPYTQLVRLQEGSKEAEDALATDADKLDSSFDILD 638 (1283)
Q Consensus 588 -----------------------------~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 638 (1283)
+|+|+|+|+||+++.+|.|+.++..|............+.+..... ....
T Consensus 674 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ive~Gth~~L~~~~~g~y~~l~~~q~~~~~~~~~~~~~~~~~~~~-~~~~ 752 (1466)
T PTZ00265 674 NKENNNKNNKDDNNNNNNNNNNKINNAGSYIIEQGTHDALMKNKNGIYYTMINNQKVSSKKSSNNDNDKDSDMKS-SAYK 752 (1466)
T ss_pred ccccccccccccccccccccccccccCCceeEeeCCHHHHHhccCCcHHHHHhhhcccccccccccccccccccc-cccc
Confidence 5999999999998558999999987754321110000000000000 0000
Q ss_pred hhhcCCCCCCccccccccccCCCCCCccccccCCCCCCCccccccCCCCCCCCchhhH----hhhhhHHHHHHHHhhcCh
Q 000789 639 KAMTRSGSRGESMRRSISRHSSGSRHSFGFTYGVPGPINVFETEEGDQGGAERTPLMI----EKRQKLSMRRLAYLNKPE 714 (1283)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 714 (1283)
. ................... ........... .....+.... ........ .......+.++++..++.
T Consensus 753 ~--~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 823 (1466)
T PTZ00265 753 D--SERGYDPDEMNGNSKHENE---SASNKKSCKMS---DENASENNAG-GKLPFLRNLFKRKPKAPNNLRIVYREIFSY 823 (1466)
T ss_pred c--ccccccccccccccccccc---ccccccccccc---cccccchhcc-ccchhhhhccccccccchhHHHHHHHHHHH
Confidence 0 0000000000000000000 00000000000 0000000000 00000000 000111334445555566
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 715 FPVLLIGSIAAGIHGVIFPIFGLLLSSSIRMFFEPEDKLRKDSRFWALIYLVLGIINLIAVPFQNYFFGVAGGKLIRRIR 794 (1283)
Q Consensus 715 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~lr 794 (1283)
++.++++++++++.+++.|+++++++.++..++.. .........|.+++++++++.+++.+++.++..++++++..++|
T Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~l~~~~~~i~~~~~~~l~~~~~~~~~~~~~~~lR 902 (1466)
T PTZ00265 824 KKDVTIIALSILVAGGLYPVFALLYAKYVSTLFDF-ANLEANSNKYSLYILVIAIAMFISETLKNYYNNVIGEKVEKTMK 902 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66688888888899999999999999998876642 22223355678888888899999999999999999999999999
Q ss_pred HHHHHHHHcCCccccccCCCChhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Q 000789 795 SLTFEKVVHQEISWFDDPANSSGSVGARLSTDASTIRSLVGDSLALVVQNIATIAAGLIIAFTANWILAFVILAVSPLML 874 (1283)
Q Consensus 795 ~~~~~~ll~~~~~ff~~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~l~~~pl~~ 874 (1283)
.++|++++++|++|||++++++|++++|+++|++.++..+...+..++..++.++++++++++++|.++++++++++++.
T Consensus 903 ~~lf~~ll~~~~~~fd~~~~~~G~l~srl~~Dv~~l~~~~~~~l~~~~~~i~~~i~~~~~~~~~~~~l~l~~~~~~~~~~ 982 (1466)
T PTZ00265 903 RRLFENILYQEISFFDQDKHAPGLLSAHINRDVHLLKTGLVNNIVIFTHFIVLFLVSMVMSFYFCPIVAAVLTGTYFIFM 982 (1466)
T ss_pred HHHHHHHHcCCHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999997778999999999999999999999999999999999999999999999999888765554443
Q ss_pred HHHHHHHHHHhHHHH--H-------------HHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHhcHHHhHHHH
Q 000789 875 VQGYTQTKFMKGFSA--D-------------AKLMYEEASQVANDAVGSIRTVASFCSEEKVMDLYEKKCEGPLKNGVRR 939 (1283)
Q Consensus 875 ~~~~~~~~~~~~~~~--~-------------~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~ 939 (1283)
.......+....... . .++...+....+.|++.|+++||+|+.|+++.++|.+..+...+...+.
T Consensus 983 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~~~~~~~~~~~~~~~~~~~~ 1062 (1466)
T PTZ00265 983 RVFAIRARLTANKDVEKKEINQPGTVFAYNSDDEIFKDPSFLIQEAFYNMNTVIIYGLEDYFCNLIEKAIDYSNKGQKRK 1062 (1466)
T ss_pred HHHHHHHHHHHHHHHHhhhccccccccchhhhHHHHHHHHHHHHHHHhcHHHHHHhcchHHHHHHHHHHHHHHHHHHHHH
Confidence 332222121111000 0 1233556688999999999999999999999999999999998888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 000789 940 GILSGAGFGFSFLVLYCTNAFCFYIGSVLVEHGKATFGQVFKVFFALTISALGVSQTSAMAPDTTKAKDSAASIFEILDS 1019 (1283)
Q Consensus 940 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~ 1019 (1283)
....+...++..++.++..++++|+|++++..|.+++|++++++.++.+...++..+...++++.++..+.+|++++++.
T Consensus 1063 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~lv~~g~it~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~a~~a~~ri~~ll~~ 1142 (1466)
T PTZ00265 1063 TLVNSMLWGFSQSAQLFINSFAYWFGSFLIRRGTILVDDFMKSLFTFLFTGSYAGKLMSLKGDSENAKLSFEKYYPLIIR 1142 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Confidence 88889999999999999999999999999999999999999988777666677888999999999999999999999987
Q ss_pred CCCCCCCCCcCCc---cCCCcccEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCC--
Q 000789 1020 KPKIDSSKDEGMT---LSSVGGAIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDP-- 1094 (1283)
Q Consensus 1020 ~~~~~~~~~~~~~---~~~~~g~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~-- 1094 (1283)
+++.+.....+.. ++...|.|+|+||+|+||++++.+||+|+||+|+|||++||||+||||||||+++|+|||+|
T Consensus 1143 ~~~~~~~~~~~~~~~~~~~~~g~I~f~nVsF~Y~~~~~~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp~~ 1222 (1466)
T PTZ00265 1143 KSNIDVRDNGGIRIKNKNDIKGKIEIMDVNFRYISRPNVPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDLKN 1222 (1466)
T ss_pred CCcCCCCCCcccccccCCCCCceEEEEEEEEECCCCCCCccccCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCCcc
Confidence 6643221111111 12345789999999999977666899999999999999999999999999999999999999
Q ss_pred ----------------------------------------------------CcceEEECCccCCCCChHHHhcceEEEc
Q 000789 1095 ----------------------------------------------------DSGHVLLDNIELPKFKLSWLRQQMGLVS 1122 (1283)
Q Consensus 1095 ----------------------------------------------------~~G~I~idG~di~~~~~~~lR~~i~~V~ 1122 (1283)
++|+|+|||+|++++++++||++|+|||
T Consensus 1223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~ 1302 (1466)
T PTZ00265 1223 DHHIVFKNEHTNDMTNEQDYQGDEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVS 1302 (1466)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeC
Confidence 6999999999999999999999999999
Q ss_pred cCCCCChhhHHHHHhcCCCCCCCHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHHHHHccCCCEEE
Q 000789 1123 QEPVLFNETIRTNIAYGKQGGATEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILL 1202 (1283)
Q Consensus 1123 Qdp~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiARAll~~p~ILi 1202 (1283)
|||+||+|||||||.||. ++++|+|+++||+.|+++|||.+||+||||.|||+|.+|||||||||||||||+|+|+|||
T Consensus 1303 Qep~LF~gTIreNI~~g~-~~at~eeI~~A~k~A~l~~fI~~LP~GydT~VGe~G~~LSGGQkQRIaIARALlr~p~ILL 1381 (1466)
T PTZ00265 1303 QEPMLFNMSIYENIKFGK-EDATREDVKRACKFAAIDEFIESLPNKYDTNVGPYGKSLSGGQKQRIAIARALLREPKILL 1381 (1466)
T ss_pred CCCccccccHHHHHhcCC-CCCCHHHHHHHHHHcCCHHHHHhCccccCCccCCCCCcCCHHHHHHHHHHHHHhcCCCEEE
Confidence 999999999999999994 4799999999999999999999999999999999999999999999999999999999999
Q ss_pred EecccCCCCHHHHHHHHHHHHHHc--CCceEEEEecCchHHhhcCEEEEEeC----CEEE-EecChHHHHhccCchhHHH
Q 000789 1203 LDEATSALDAESERVVQDALERVM--VNRTTVVVAHRLTTIKNADIIAVVKN----GVIA-EQGSHDALMKITDGAYASL 1275 (1283)
Q Consensus 1203 LDEaTSaLD~~te~~I~~~L~~~~--~~~TvI~IaHrl~ti~~~D~I~vl~~----G~Iv-e~Gt~~eLl~~~~g~y~~L 1275 (1283)
|||||||||++||+.|+++|++.. +++|+|+||||++++++||+|+||++ |+++ |+|+|+||+++++|.|++|
T Consensus 1382 LDEaTSaLD~~sE~~I~~~L~~~~~~~~~TvIiIaHRlsti~~aD~Ivvl~~~~~~G~iv~e~Gth~eLl~~~~g~Y~~l 1461 (1466)
T PTZ00265 1382 LDEATSSLDSNSEKLIEKTIVDIKDKADKTIITIAHRIASIKRSDKIVVFNNPDRTGSFVQAHGTHEELLSVQDGVYKKY 1461 (1466)
T ss_pred EeCcccccCHHHHHHHHHHHHHHhccCCCEEEEEechHHHHHhCCEEEEEeCCCCCCCEEEEecCHHHHHhcCCChHHHH
Confidence 999999999999999999999984 68999999999999999999999999 9954 9999999998448999999
Q ss_pred HHHh
Q 000789 1276 VALH 1279 (1283)
Q Consensus 1276 ~~~~ 1279 (1283)
|+.|
T Consensus 1462 ~~~~ 1465 (1466)
T PTZ00265 1462 VKLA 1465 (1466)
T ss_pred Hhhc
Confidence 9876
No 3
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.1e-162 Score=1537.68 Aligned_cols=1137 Identities=22% Similarity=0.306 Sum_probs=875.5
Q ss_pred HHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHhCCh
Q 000789 67 HPFMTLIFGHLINSFGSSDRSHVVHEVSKVAVKFLYLAAGTGIAAFLQVSCWMVTGERQATRIRGLY----LKTILRQDI 142 (1283)
Q Consensus 67 ~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~~----~~~ll~~~~ 142 (1283)
....|.++..+++.+...... ... ..++++..++..++..+....+.+...+++.++|..+ |+|.++++-
T Consensus 217 ~~~~P~lL~~li~~~~~~~~~--~~~----g~~~a~~lf~~~~l~~l~~~~~~~~~~~~g~r~R~al~~~IY~K~L~ls~ 290 (1381)
T KOG0054|consen 217 GFVGPLLLKKLILFFSEKRLP--LNN----GYLLAVLLFLASLLQSLLLHQYFFVSFRVGMRLRSALISAIYRKALRLSN 290 (1381)
T ss_pred ccccHHHHHHHHHHhcCCCcc--cch----hHHHHHHHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHhhhcCch
Confidence 555667889999987654211 111 1111111111112222222223445667777777765 455555554
Q ss_pred hhHhccCCccHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH----HHHHHHHHHHHHHHHHHHHHH
Q 000789 143 GFFDTETTTGEVIGRMSGDTILIQEAMGEKVGKFIQLMSTFFGGFVVALARGWFL----ALVLLACLPAIVIAGGSMALI 218 (1283)
Q Consensus 143 ~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l----~l~~l~~~p~~~~~~~~~~~~ 218 (1283)
..-... ++|+++|.|++|++++.++. .+++.+|....-+++..++-|.+ +++.++++.+++.+..+++++
T Consensus 291 ~~~~~~-t~G~ivNlms~D~~ri~~~~-----~~~h~~w~~Plqi~~~l~lLy~~LG~sa~~G~~~~il~~p~n~~~a~~ 364 (1381)
T KOG0054|consen 291 SARGET-TVGEIVNLMSVDAQRLSDAA-----CFLHLLWSAPLQIILALYLLYGLLGPSALAGVAVMVLLIPLNSFLAKK 364 (1381)
T ss_pred hhccCC-CcchhhhhhhhhHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHH
Confidence 443333 78999999999999999876 34555555444444444444432 444555555666677788889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 219 MSKMSSRGQIAYSEAGTVVEQTVSGIRTVSSFTGEKQAIEKYNNKLQVAYRAAVQQGMVSGIGLGVLMLTVIGTYGLAVW 298 (1283)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (1283)
.++..++..+..+++...++|.++|||+||.|+||+.+.++..+.++++.+...+...+.++..........++.++ .
T Consensus 365 ~~~~q~~~m~~~D~Rik~~nEiL~~IkviK~yaWE~~F~~~I~~~R~~El~~lrk~~~~~~~~~~~~~~~p~lv~~~--t 442 (1381)
T KOG0054|consen 365 IAKFQKRLMKRKDERIKLMNEILNGIKVIKLYAWEKPFLKKIEDLRQKELKLLRKSAYLSALNSFLNFFSPVLVSVV--T 442 (1381)
T ss_pred HHHHHHHHhhhhhHHHHHHHHHHhhhHhhhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--H
Confidence 99999999999999999999999999999999999999999999999999988888888877665554444333332 3
Q ss_pred HHHHH-HHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCCcccCccccEEE
Q 000789 299 YGSKL-IIEKGYNGGTVINVIMAIMTGGMSLGQTSPCLNAFAGGQAAAYKMFETIKRKPKIDPYDTSGITLEKIEGEIEL 377 (1283)
Q Consensus 299 ~g~~~-v~~~~~t~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~i~~ 377 (1283)
++.+. ...+.+++...|+.+.++..+..|+..++..+..+.++.+|.+|+.+++..++..+... ...+..+.+..|++
T Consensus 443 F~~~v~~~~~~lt~~~aF~slalfniLr~pl~~~P~~i~~~vqa~VS~~Ri~~fl~~~e~~~~~~-~~~~~~~~~~~i~i 521 (1381)
T KOG0054|consen 443 FVVFVLLLGNLLTASTAFTSLALFNILRFPLFMLPSVISQLVQAKVSLKRLKEFLLSEELDPDSV-ERSPDEAGENAIEI 521 (1381)
T ss_pred HHHHhhccCccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCcccc-ccCCCCCCCceEEE
Confidence 34443 45667888888888888888889999988899999999999999999998654322211 10122233457999
Q ss_pred EEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHHhcccEEEc
Q 000789 378 RDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWIREKIGLVS 457 (1283)
Q Consensus 378 ~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~ 457 (1283)
+|.+|+|++....+.|+||||+|++|+.+|||||.|||||+|+.+|+|+++..+|++.++| .++|||
T Consensus 522 ~~~sfsW~~~~~~~tL~dIn~~i~~G~lvaVvG~vGsGKSSLL~AiLGEm~~~sG~v~v~g-------------siaYv~ 588 (1381)
T KOG0054|consen 522 KNGSFSWDSESPEPTLKDINFEIKKGQLVAVVGPVGSGKSSLLSAILGEMPKLSGSVAVNG-------------SVAYVP 588 (1381)
T ss_pred eeeeEecCCCCCcccccceeEEecCCCEEEEECCCCCCHHHHHHHHhcCcccccceEEEcC-------------eEEEec
Confidence 9999999864445699999999999999999999999999999999999999999999998 599999
Q ss_pred cCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHhcCCCEEEE
Q 000789 458 QEPILFATSLRENIAYGKENATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARAILKNPKILLL 537 (1283)
Q Consensus 458 Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARal~~~~~illl 537 (1283)
|+||+|++||||||.||.| .++++++++.+.|++.++++.||.|+.|.|||+|.+|||||||||+||||+|+|+||++|
T Consensus 589 Q~pWI~ngTvreNILFG~~-~d~~rY~~Vi~aC~L~~Dle~Lp~GD~TeIGErGinLSGGQKqRIsLARAVY~~adIYLL 667 (1381)
T KOG0054|consen 589 QQPWIQNGTVRENILFGSP-YDEERYDKVIKACALKKDLEILPFGDLTEIGERGINLSGGQKQRISLARAVYQDADIYLL 667 (1381)
T ss_pred cccHhhCCcHHHhhhcCcc-ccHHHHHHHHHHccCHhHHhhcCCCCcceecCCccCCcHhHHHHHHHHHHHhccCCEEEE
Confidence 9999999999999999987 578899999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHH-HHHHHHHcCCCeEEEEecCchhhhccCEEEEEeCCEEeEecChhHHhcCCCChhHHHHHHhhcC
Q 000789 538 DEATSALDAESERIV-QDALVKIMTSRTTVVVAHRLTTIRNADLIAVVHQGKIVEKGTHDELIKDPEGPYTQLVRLQEGS 616 (1283)
Q Consensus 538 DE~ts~lD~~~~~~i-~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~ 616 (1283)
|||+||+|+++.++| .++|+.+.++||+|+|||.++.+++||+|++|++|+|++.|+|+||++. +..+.++.......
T Consensus 668 DDplSAVDahvg~~if~~ci~~~L~~KT~ILVTHql~~L~~ad~Iivl~~G~I~~~Gty~el~~~-~~~~~~l~~~~~~~ 746 (1381)
T KOG0054|consen 668 DDPLSAVDAHVGKHIFEECIRGLLRGKTVILVTHQLQFLPHADQIIVLKDGKIVESGTYEELLKS-GGDFAELAHEEESE 746 (1381)
T ss_pred cCcchhhhHhhhHHHHHHHHHhhhcCCEEEEEeCchhhhhhCCEEEEecCCeEecccCHHHHHhc-chhHHHHhhccchh
Confidence 999999999987655 5677777889999999999999999999999999999999999999976 67777773322111
Q ss_pred chhhhhhhccccccCchhhhhhhhhcCCCCCCccccccccccCCCCCCccccccCCCCCCCccccccCCCCCCCCchhhH
Q 000789 617 KEAEDALATDADKLDSSFDILDKAMTRSGSRGESMRRSISRHSSGSRHSFGFTYGVPGPINVFETEEGDQGGAERTPLMI 696 (1283)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 696 (1283)
.+.. . ..+..+. +...+... .+..... +.... ....++ ....+....++
T Consensus 747 ~~~~-~---~~~~~~~----------~~~~~~~~-~~~~~~~-----~~~~~----------~~~~~~-~~~~~~~~~ee 795 (1381)
T KOG0054|consen 747 QEEE-A---SEKDLES----------GESSRESE-SRSLESL-----SSEEE----------KSKDEK-EEEDKLVQEEE 795 (1381)
T ss_pred hccc-c---ccccccc----------cccccchh-hhhhhhh-----ccccc----------cccccc-chhhHHHHHHH
Confidence 1110 0 0000000 00000000 0000000 00000 000000 00000111122
Q ss_pred hhhhhHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCch--hhh--hhhHHHHHHHHHHHHHHH
Q 000789 697 EKRQKLSMRRLAYLNKPEFPVLLIGSIAAGIHGVIFPIFGLLLSSSIRMFFEPED--KLR--KDSRFWALIYLVLGIINL 772 (1283)
Q Consensus 697 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~~~~~l~~~~~ 772 (1283)
+..+++.+.-+..|.+...+++.....+ ...+........+..+..+|.... ... .+..++.++|.+++++..
T Consensus 796 ~~~G~v~~~vY~~Y~~a~~g~~~~~~~~---~~~v~~~~~~~~~~~WLs~W~~~~~~~~~~~~~~~~~~~vY~~l~~~~~ 872 (1381)
T KOG0054|consen 796 RETGKVSWSVYKKYIKAAGGFLLVLLIL---LLFVLTQVLQIASNYWLSYWTDDGEDNGTTTVSTSFYLGVYALLGVASS 872 (1381)
T ss_pred HhcCEeeHHHHHHHHHhcccHHHHHHHH---HHHHHHHHHHHHHHHHHHHhcCCcccccccCCCcchHHHHHHHHHHHHH
Confidence 3445566666666555433332222111 111112222233344444554321 111 356789999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 773 IAVPFQNYFFGVAGGKLIRRIRSLTFEKVVHQEISWFDDPANSSGSVGARLSTDASTIRSLVGDSLALVVQNIATIAAGL 852 (1283)
Q Consensus 773 l~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~ff~~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~~~~~ 852 (1283)
++..++.+.+...+.+++++||+.+++++++.||+|||. ||+|+|+|||++|++.+|..++..+..++..++.+++.+
T Consensus 873 ~~~~~rs~~~~~~~l~aS~~Lh~~ml~~Ilrapm~FFdt--TP~GRILNRFSkD~~~vD~~Lp~~~~~~~~~~~~~l~~~ 950 (1381)
T KOG0054|consen 873 LLTLLRSFLFAKGGLKASRKLHDKLLNSILRAPMSFFDT--TPTGRILNRFSKDIDTVDVLLPFTLEFFLQSLLNVLGIL 950 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhcCC--CCccchhhhcccchHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999995 999999999999999999999999999999999999998
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH----HHHHHHHHHhhhHHHHHhccHHHHHHHHHHH
Q 000789 853 IIAFTANWILAFVILAVSPLMLVQGYTQTKFMKGFSADAKLMYEE----ASQVANDAVGSIRTVASFCSEEKVMDLYEKK 928 (1283)
Q Consensus 853 ~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~ 928 (1283)
++..+..|+ ++++++|+.+++.+++.+|.+ .+|++++.++. ..+|++|++.|+.|||||+.+++|.+++...
T Consensus 951 ~vi~~~~P~---fli~~~pl~v~~~~~~~~Y~~-tsReLkRLesitRSPi~sh~~Etl~GlsTIRAf~~~~rf~~~~~~~ 1026 (1381)
T KOG0054|consen 951 VVISYVTPW---FLIAIIPLGVIYYFVQRYYLA-TSRELKRLESITRSPIYSHFSETLQGLSTIRAFGKEERFIQENDEL 1026 (1381)
T ss_pred HHhhHHhHH---HHHHHHHHHHHHHHHHHHHHH-HhHHHHHhhhcccchHHHhHHHHhcCcceeeeccccHHHHHHHHHH
Confidence 888877775 455666666666666655554 68888888764 4799999999999999999999999999999
Q ss_pred HhcHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 929 CEGPLKNGVRRGILSGAGFGFSFLVLYCTNAFCFYIGSVLV--EHGKATFGQVFKVFFALTISALGVSQTSAMAPDTTKA 1006 (1283)
Q Consensus 929 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1006 (1283)
.|.+.+...-... ...++++. +-.+...+++..+...+ ..+..+.|..-..+.+.......++.+.....++++.
T Consensus 1027 ~D~~~~~~f~~~~-a~RWla~R--le~ig~~~v~~~al~~vl~~~~~~~~g~vGLslsyal~lt~~l~~~vR~~~elEn~ 1103 (1381)
T KOG0054|consen 1027 IDENSRAFFLSIS-ANRWLAVR--LELLGNLVVLIAALFAVLLPSGLISPGLVGLSLSYALQLTGLLQWLVRQSSELENN 1103 (1381)
T ss_pred hhhhHHHHHHHHH-HHHHHHHH--HHHHHHHHHHHHHHHHHHccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9998886543322 22333332 22222222222222222 2222667777777788888888999999999999999
Q ss_pred HHHHHHHHHHhccCCCCCCCCCcC--CccCCCcccEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHH
Q 000789 1007 KDSAASIFEILDSKPKIDSSKDEG--MTLSSVGGAIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTV 1084 (1283)
Q Consensus 1007 ~~a~~ri~~~~~~~~~~~~~~~~~--~~~~~~~g~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL 1084 (1283)
+.++||+.+|.+.++|.+...+.. ++..+.+|.|+|+|++.+|.+. .++|||||||+|+||||||||||||||||||
T Consensus 1104 m~SVERv~eY~~~~~E~p~~~~~~~pp~~WP~~G~I~f~~~~~RYrp~-lp~VLk~is~~I~p~eKVGIVGRTGaGKSSL 1182 (1381)
T KOG0054|consen 1104 MVSVERVLEYTDIPSEAPLEIEESRPPPSWPSKGEIEFEDLSLRYRPN-LPLVLKGISFTIKPGEKVGIVGRTGAGKSSL 1182 (1381)
T ss_pred chhhhHHHHHhcCCCCCCCCCcCCCCCCCCCCCCeEEEEEeEEEeCCC-CcchhcCceEEEcCCceEEEeCCCCCCHHHH
Confidence 999999999999776622222122 2223468999999999999865 5789999999999999999999999999999
Q ss_pred HHHHhccCCCCcceEEECCccCCCCChHHHhcceEEEccCCCCChhhHHHHHhcCCCCCCCHHHHHHHHHHhChHHHHHh
Q 000789 1085 IALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMGLVSQEPVLFNETIRTNIAYGKQGGATEEEIIAATEASNAHNFISA 1164 (1283)
Q Consensus 1085 ~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~I~~ 1164 (1283)
+++|+|+.+|.+|+|.|||+||+++++++||+++++|||||+||+||+|+||++. ++++|++||+|+|+|+++++|.+
T Consensus 1183 ~~aLFRl~e~~~G~I~IDgvdI~~igL~dLRsrlsIIPQdPvLFsGTvR~NLDPf--~e~sD~~IW~ALe~~~Lk~~v~~ 1260 (1381)
T KOG0054|consen 1183 ILALFRLVEPAEGEILIDGVDISKIGLHDLRSRLSIIPQDPVLFSGTVRFNLDPF--DEYSDDEIWEALERCQLKDVVSS 1260 (1381)
T ss_pred HHHHHHhcCccCCeEEEcCeecccccHHHHHhcCeeeCCCCceecCccccccCcc--cccCHHHHHHHHHHhChHHHHhh
Confidence 9999999999999999999999999999999999999999999999999999874 57999999999999999999999
Q ss_pred CCCCcccccCCCCCCCChhHHHHHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcCCceEEEEecCchHHhhc
Q 000789 1165 LPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNA 1244 (1283)
Q Consensus 1165 lp~Gldt~vge~G~~LSgGQrQRlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~~ 1244 (1283)
+|+|||++|.|+|.|||.||||++||||||||++|||+||||||++|++|+..||++|++.|++||||+||||++||.||
T Consensus 1261 ~p~~Ld~~v~egG~N~SvGQRQLlCLARALLr~skILvLDEATAsVD~~TD~lIQ~tIR~~F~dcTVltIAHRl~TVmd~ 1340 (1381)
T KOG0054|consen 1261 LPGGLDSEVSEGGENFSVGQRQLLCLARALLRKSKILVLDEATASVDPETDALIQKTIREEFKDCTVLTIAHRLNTVMDS 1340 (1381)
T ss_pred CCcCCCceecCCCccCChHHHHHHHHHHHHhccCCEEEEecccccCChHHHHHHHHHHHHHhcCCeEEEEeeccchhhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEEEeCCEEEEecChHHHHhccCchhHHHHHHh
Q 000789 1245 DIIAVVKNGVIAEQGSHDALMKITDGAYASLVALH 1279 (1283)
Q Consensus 1245 D~I~vl~~G~Ive~Gt~~eLl~~~~g~y~~L~~~~ 1279 (1283)
|||+|||+|+|+|+|+|++|++++++.|++++.+.
T Consensus 1341 DrVlVld~G~v~EfdsP~~Ll~~~~S~f~~~l~~~ 1375 (1381)
T KOG0054|consen 1341 DRVLVLDAGRVVEFDSPAELLSDKDSLFSSLLKEA 1375 (1381)
T ss_pred CeEEEeeCCeEeecCChHHHHhCCcchHHHHHHHH
Confidence 99999999999999999999998899998776553
No 4
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=3.3e-157 Score=1579.94 Aligned_cols=1157 Identities=19% Similarity=0.262 Sum_probs=850.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 53 MIVGTISAIGSGLAHPFMTLIFGHLINSFGSSDRSHVVHEVSKVAVKFLYLAAGTGIAAFLQVSCWMVTGERQATRIRGL 132 (1283)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~ 132 (1283)
+++++++.++..++....|++++.+++.+...+.. . ..... ++.+++..++..++..-..+...+.+.++...++..
T Consensus 303 ~~~~~~~~i~~~~~~~~~P~ll~~li~~v~~~~~~-~-~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~ir~~L~~~ 379 (1622)
T PLN03130 303 FWLGGFFKIGNDLSQFVGPLLLNLLLESMQNGEPA-W-IGYIY-AFSIFVGVVLGVLCEAQYFQNVMRVGFRLRSTLVAA 379 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc-h-HHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555566666777777888999999987543211 1 11111 111111111111111101111345677777788889
Q ss_pred HHHHHHhCChhhHhccCCccHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Q 000789 133 YLKTILRQDIGFFDTETTTGEVIGRMSGDTILIQEAMGEKVGKFIQLMSTFFGGFVVALARGWFLALVLLACLPAIVIAG 212 (1283)
Q Consensus 133 ~~~~ll~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~~~ 212 (1283)
+|+|+++++..++++. ++|++++++++|++.+++++. .+..++...+.+++++++++..-...+++.++++.+++.+.
T Consensus 380 i~~k~L~l~~~~~~~~-~~G~ivnl~s~Dv~~i~~~~~-~l~~l~~~pl~ii~~~~lL~~~lg~~~l~g~~v~~l~~~l~ 457 (1622)
T PLN03130 380 VFRKSLRLTHEGRKKF-TSGKITNLMTTDAEALQQICQ-QLHTLWSAPFRIIIAMVLLYQQLGVASLIGSLMLVLMFPIQ 457 (1622)
T ss_pred HHHHHhcCChhhcCCC-CHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999876 899999999999999999874 45555555555555444443321112222222233344445
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 213 GSMALIMSKMSSRGQIAYSEAGTVVEQTVSGIRTVSSFTGEKQAIEKYNNKLQVAYRAAVQQGMVSGIGLGVLMLTVIGT 292 (1283)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (1283)
.++.+++++..++.++..+++.+.+.|.++|+++||+|++|+.+.+++.+.++++.+...+.....++...+..... .
T Consensus 458 ~~~~~~~~~~~~~~~~~~d~r~~~~~E~L~gi~~IK~~~~E~~~~~~i~~~r~~e~~~~~~~~~~~~~~~~~~~~~~--~ 535 (1622)
T PLN03130 458 TFIISKMQKLTKEGLQRTDKRIGLMNEVLAAMDTVKCYAWENSFQSKVQTVRDDELSWFRKAQLLSAFNSFILNSIP--V 535 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--H
Confidence 56777788888888889999999999999999999999999999999999888877776666655554433322221 1
Q ss_pred HHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCCcccCcc
Q 000789 293 YGLAVWYGSKLIIEKGYNGGTVINVIMAIMTGGMSLGQTSPCLNAFAGGQAAAYKMFETIKRKPKIDPYDTSGITLEKIE 372 (1283)
Q Consensus 293 ~~~~~~~g~~~v~~~~~t~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~ 372 (1283)
.+.++++|++.+..|.+|+|.+++++.++..+..|+..+...+..+.++.++++|+.++++.++..+... .......
T Consensus 536 ~v~~~~fg~~~~~~g~Lt~g~vf~~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~~L~~~e~~~~~~---~~~~~~~ 612 (1622)
T PLN03130 536 LVTVVSFGVFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPNLITQAVNANVSLKRLEELLLAEERVLLPN---PPLEPGL 612 (1622)
T ss_pred HHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccccC---CcccCCC
Confidence 3445667888888999999999999888888889999988889999999999999999997654322111 0111123
Q ss_pred ccEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCC-ceEEECCcccCCCCHHHHhc
Q 000789 373 GEIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDA-GEVLIDGIDIKKLQLKWIRE 451 (1283)
Q Consensus 373 ~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~-G~i~~~g~~~~~~~~~~~r~ 451 (1283)
+.|+++|++|+|++++++++|+|+||+|++|++++||||||||||||+++|+|+++|++ |+|.+ |+
T Consensus 613 ~~I~~~nvsf~y~~~~~~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~GG~I~l-------------~~ 679 (1622)
T PLN03130 613 PAISIKNGYFSWDSKAERPTLSNINLDVPVGSLVAIVGSTGEGKTSLISAMLGELPPRSDASVVI-------------RG 679 (1622)
T ss_pred CceEEEeeEEEccCCCCCceeeceeEEecCCCEEEEECCCCCCHHHHHHHHHHhhccCCCceEEE-------------cC
Confidence 47999999999985444679999999999999999999999999999999999999999 99986 45
Q ss_pred ccEEEccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHhcC
Q 000789 452 KIGLVSQEPILFATSLRENIAYGKENATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARAILKN 531 (1283)
Q Consensus 452 ~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARal~~~ 531 (1283)
+|+||+|+||+|++||||||+||.| .++++++++++.|+++++++.||+|++|.+||+|.+|||||||||+||||+|++
T Consensus 680 ~Iayv~Q~p~LfngTIreNI~fg~~-~d~e~y~~vl~a~~L~~di~~LP~Gd~T~IGe~G~~LSGGQKQRIaLARAly~~ 758 (1622)
T PLN03130 680 TVAYVPQVSWIFNATVRDNILFGSP-FDPERYERAIDVTALQHDLDLLPGGDLTEIGERGVNISGGQKQRVSMARAVYSN 758 (1622)
T ss_pred eEEEEcCccccCCCCHHHHHhCCCc-ccHHHHHHHHHHhCcHHHHHhCCCcccccccCCCCCCCHHHHHHHHHHHHHhCC
Confidence 8999999999999999999999987 578999999999999999999999999999999999999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHH-HHHHHHcCCCeEEEEecCchhhhccCEEEEEeCCEEeEecChhHHhcCCCChhHHHH
Q 000789 532 PKILLLDEATSALDAESERIVQ-DALVKIMTSRTTVVVAHRLTTIRNADLIAVVHQGKIVEKGTHDELIKDPEGPYTQLV 610 (1283)
Q Consensus 532 ~~illlDE~ts~lD~~~~~~i~-~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~~~l~~~~~~~~~~~~ 610 (1283)
|+||||||||||||+++++++. +++....+++|+|+||||++.++.||+|++|++|+|+++|+|+||+++ ++.|.+++
T Consensus 759 ~~IlLLDEptSALD~~~~~~I~~~~l~~~l~~kTvIlVTH~l~~l~~aD~Ii~L~~G~i~e~Gt~~eL~~~-~~~~~~l~ 837 (1622)
T PLN03130 759 SDVYIFDDPLSALDAHVGRQVFDKCIKDELRGKTRVLVTNQLHFLSQVDRIILVHEGMIKEEGTYEELSNN-GPLFQKLM 837 (1622)
T ss_pred CCEEEECCCccccCHHHHHHHHHHHhhHHhcCCEEEEEECCHhHHHhCCEEEEEeCCEEEEeCCHHHHHhc-chhHHHHH
Confidence 9999999999999999998775 567777788999999999999999999999999999999999999976 77888887
Q ss_pred HHhhcCchhhhhhhccccccCchhhhhhhhhcCCCCCCccccccccccCCCCCCccccccCCCCCCCccccccCCCCCCC
Q 000789 611 RLQEGSKEAEDALATDADKLDSSFDILDKAMTRSGSRGESMRRSISRHSSGSRHSFGFTYGVPGPINVFETEEGDQGGAE 690 (1283)
Q Consensus 611 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 690 (1283)
..+...++..+.. ..+...+. .. ....... ......... . ....+. ....
T Consensus 838 ~~~~~~~~~~~~~--~~~~~~~~-~~------~~~~~~~--~~~~~~~~~--------~---------~~~~~~--~~~~ 887 (1622)
T PLN03130 838 ENAGKMEEYVEEN--GEEEDDQT-SS------KPVANGN--ANNLKKDSS--------S---------KKKSKE--GKSV 887 (1622)
T ss_pred Hhccccccccccc--cccccccc-cc------ccccccc--ccccccccc--------c---------cccccc--cchh
Confidence 6543211110000 00000000 00 0000000 000000000 0 000000 0000
Q ss_pred CchhhHhhhhhHHHHHHHHhhcChh--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc-hhhhhhhHHHHHHHHHH
Q 000789 691 RTPLMIEKRQKLSMRRLAYLNKPEF--PVLLIGSIAAGIHGVIFPIFGLLLSSSIRMFFEPE-DKLRKDSRFWALIYLVL 767 (1283)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l 767 (1283)
....+.+..+.+.+..+.+|.+... +.+.+.+++..+..++. .....+...|... ........+|.++|+++
T Consensus 888 ~~~~e~~~~g~v~~~vy~~Y~~~~g~~~~~~~~~~~~~~~~~~~-----~~~~~wl~~w~~~~~~~~~~~~~~~~i~~~l 962 (1622)
T PLN03130 888 LIKQEERETGVVSWKVLERYKNALGGAWVVMILFLCYVLTEVFR-----VSSSTWLSEWTDQGTPKTHGPLFYNLIYALL 962 (1622)
T ss_pred hhhHHHHhcCccCHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHhccccCCCchhHHHHHHHHH
Confidence 0011122233344444444433311 11111111111111111 1122222223211 11122345678888899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHH
Q 000789 768 GIINLIAVPFQNYFFGVAGGKLIRRIRSLTFEKVVHQEISWFDDPANSSGSVGARLSTDASTIRSLVGDSLALVVQNIAT 847 (1283)
Q Consensus 768 ~~~~~l~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~ff~~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~ 847 (1283)
+++..++.+++.+++...+.+++.++|.++|++++++|++|||+ +++|+++||+++|++.++..++..+..++..++.
T Consensus 963 ~~~~~i~~~~~~~~~~~~~~~~~~~L~~~l~~~ll~~p~~ffd~--~~~G~IlnR~s~Di~~id~~l~~~~~~~~~~~~~ 1040 (1622)
T PLN03130 963 SFGQVLVTLLNSYWLIMSSLYAAKRLHDAMLGSILRAPMSFFHT--NPLGRIINRFAKDLGDIDRNVAVFVNMFLGQIFQ 1040 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhcc--CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999995 8999999999999999999999999999999888
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH----HHHHHHHHHHHHhhhHHHHHhccHHHHHH
Q 000789 848 IAAGLIIAFTANWILAFVILAVSPLMLVQGYTQTKFMKGFSADAKLM----YEEASQVANDAVGSIRTVASFCSEEKVMD 923 (1283)
Q Consensus 848 ~~~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~e~l~gi~tIra~~~~~~~~~ 923 (1283)
+++.+++++..+|... ++++|+.+++...+..+ .+..++.++. .+...+++.|++.|++|||+|+.++++.+
T Consensus 1041 ~i~~~i~i~~~~~~~~---~~~~pl~~~~~~~~~~~-~~~~r~~~r~~~~~~s~~~~~~~Etl~Gi~tIraf~~~~~f~~ 1116 (1622)
T PLN03130 1041 LLSTFVLIGIVSTISL---WAIMPLLVLFYGAYLYY-QSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMAE 1116 (1622)
T ss_pred HHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhcchHHHHHHHHhCCHHHHHhCcHHHHHHH
Confidence 8888887777776433 23334433333222222 2333444433 34567899999999999999999998888
Q ss_pred HHHHHHhcHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-cC-----HHHHHHHHHHHHHHHHHHHHHH
Q 000789 924 LYEKKCEGPLKNGVRRGILSGAGFGFSFLVLYCTNAFCFYIGSVLVEHGK-AT-----FGQVFKVFFALTISALGVSQTS 997 (1283)
Q Consensus 924 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~g~-~~-----~~~~~~~~~~~~~~~~~~~~~~ 997 (1283)
.+.+..+...+......... .+.++. +..+...++++.+...+..+. .. .+.+..++.+.......+..+.
T Consensus 1117 ~~~~~~~~~~~~~~~~~~~~-~wl~~~--l~~~~~~~i~~~~~~~v~~~~~~~~~~~~~~~~G~~ls~~~~~~~~l~~l~ 1193 (1622)
T PLN03130 1117 INGRSMDNNIRFTLVNMSSN-RWLAIR--LETLGGLMIWLTASFAVMQNGRAENQAAFASTMGLLLSYALNITSLLTAVL 1193 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHH--HHHHHHHHHHHHHHHHHHcccccccchhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 87777766554433222111 111111 111122222223333333321 11 1222222333444555666777
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCCCCCCcCCcc--CCCcccEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEc
Q 000789 998 AMAPDTTKAKDSAASIFEILDSKPKIDSSKDEGMTL--SSVGGAIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVG 1075 (1283)
Q Consensus 998 ~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~--~~~~g~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG 1075 (1283)
.....++..+.+++|+.++++.+++.+...+...++ .+..|.|+|+||+|+|+++ .++||+|+||+|+|||+|||||
T Consensus 1194 ~~~~~~e~~~~sveRi~e~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~~-~~~VL~~is~~I~~GekVaIVG 1272 (1622)
T PLN03130 1194 RLASLAENSLNAVERVGTYIDLPSEAPLVIENNRPPPGWPSSGSIKFEDVVLRYRPE-LPPVLHGLSFEISPSEKVGIVG 1272 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCcccccccCCCCCCCCCCCCcEEEEEEEEEeCCC-CCceecceeEEEcCCCEEEEEC
Confidence 777888999999999999998766543211111111 1346789999999999743 3579999999999999999999
Q ss_pred CCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHhcceEEEccCCCCChhhHHHHHhcCCCCCCCHHHHHHHHHH
Q 000789 1076 ESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMGLVSQEPVLFNETIRTNIAYGKQGGATEEEIIAATEA 1155 (1283)
Q Consensus 1076 ~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~~~~sd~ei~~al~~ 1155 (1283)
|||||||||+++|+|+|+|++|+|+|||+|++++++++||++|++|||||+||+|||||||+++. +++|+|+|+||++
T Consensus 1273 rSGSGKSTLl~lL~rl~~p~~G~I~IDG~dI~~i~l~~LR~~IsiVpQdp~LF~GTIreNLd~~~--~~tdeei~~Al~~ 1350 (1622)
T PLN03130 1273 RTGAGKSSMLNALFRIVELERGRILIDGCDISKFGLMDLRKVLGIIPQAPVLFSGTVRFNLDPFN--EHNDADLWESLER 1350 (1622)
T ss_pred CCCCCHHHHHHHHhCcCCCCCceEEECCEecccCCHHHHHhccEEECCCCccccccHHHHhCcCC--CCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999873 6899999999999
Q ss_pred hChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcCCceEEEEe
Q 000789 1156 SNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVA 1235 (1283)
Q Consensus 1156 a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~Ia 1235 (1283)
+++++||+++|+||||+|||+|.+|||||||||||||||+++|+|||||||||+||++||+.|+++|++.+++||+|+||
T Consensus 1351 a~l~~~I~~lp~GLdt~Vge~G~nLSgGQrQrlaLARALLr~p~ILILDEATSaLD~~Te~~Iq~~I~~~~~~~TvI~IA 1430 (1622)
T PLN03130 1351 AHLKDVIRRNSLGLDAEVSEAGENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIA 1430 (1622)
T ss_pred cCcHHHHHhCccccCccccCCCCCCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCchHHhhcCEEEEEeCCEEEEecChHHHHhccCchhHHHHHHhhc
Q 000789 1236 HRLTTIKNADIIAVVKNGVIAEQGSHDALMKITDGAYASLVALHVS 1281 (1283)
Q Consensus 1236 Hrl~ti~~~D~I~vl~~G~Ive~Gt~~eLl~~~~g~y~~L~~~~~~ 1281 (1283)
||++|+++||||+||++|+|+|+|+|+||+++++|.|++|++.+..
T Consensus 1431 HRL~tI~~~DrIlVLd~G~IvE~Gt~~eLl~~~~g~f~~L~~~~~~ 1476 (1622)
T PLN03130 1431 HRLNTIIDCDRILVLDAGRVVEFDTPENLLSNEGSAFSKMVQSTGA 1476 (1622)
T ss_pred CChHHHHhCCEEEEEECCEEEEeCCHHHHHhCCCCHHHHHHHHcCh
Confidence 9999999999999999999999999999999767999999987643
No 5
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=2.3e-156 Score=1574.93 Aligned_cols=1153 Identities=19% Similarity=0.259 Sum_probs=854.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 54 IVGTISAIGSGLAHPFMTLIFGHLINSFGSSDRSHVVHEVSKVAVKFLYLAAGTGIAAFLQVSCWMVTGERQATRIRGLY 133 (1283)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~~ 133 (1283)
+.+.++.++..++....|++++.+++.+...+.. . .. ..++..+++..++..++.....+...+.+.++...++..+
T Consensus 304 ~~~~~~~i~~~~~~~~~P~ll~~li~~~~~~~~~-~-~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ir~~l~~~i 380 (1495)
T PLN03232 304 WLGGIFKIGHDLSQFVGPVILSHLLQSMQEGDPA-W-VG-YVYAFLIFFGVTFGVLCESQYFQNVGRVGFRLRSTLVAAI 380 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc-c-hH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445556666777777888999999987543211 1 11 1111111111122222221112223566777777888899
Q ss_pred HHHHHhCChhhHhccCCccHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH---HHHHH
Q 000789 134 LKTILRQDIGFFDTETTTGEVIGRMSGDTILIQEAMGEKVGKFIQLMSTFFGGFVVALARGWFLALVLLACL---PAIVI 210 (1283)
Q Consensus 134 ~~~ll~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~l~~l~~~---p~~~~ 210 (1283)
|+|+++++..++++. ++|++++++++|++.+++.+ ..+..++...+.++++++++ .+.+++..++.+ .+++.
T Consensus 381 ~~k~l~l~~~~~~~~-~~G~i~n~ls~Dv~~i~~~~-~~l~~l~~~p~~ii~~~~~l---~~~lg~~~l~~~~v~~l~~p 455 (1495)
T PLN03232 381 FHKSLRLTHEARKNF-ASGKVTNMITTDANALQQIA-EQLHGLWSAPFRIIVSMVLL---YQQLGVASLFGSLILFLLIP 455 (1495)
T ss_pred HHHHhcCChhhcCCC-CHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH---HHHHhHHHHHHHHHHHHHHH
Confidence 999999999999876 89999999999999999986 34444444444444333332 223333322222 22223
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 211 AGGSMALIMSKMSSRGQIAYSEAGTVVEQTVSGIRTVSSFTGEKQAIEKYNNKLQVAYRAAVQQGMVSGIGLGVLMLTVI 290 (1283)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (1283)
+..++.++.++..++.++..+++.+.+.|.++||++||+|++|+.+.+++++.++++.+...+.....++...+.....
T Consensus 456 l~~~~~~~~~~~~~~~~~~~d~r~~~~~E~l~gi~~IK~~~~e~~~~~~~~~~r~~e~~~~~~~~~~~~~~~~~~~~~~- 534 (1495)
T PLN03232 456 LQTLIVRKMRKLTKEGLQWTDKRVGIINEILASMDTVKCYAWEKSFESRIQGIRNEELSWFRKAQLLSAFNSFILNSIP- 534 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 4556778888888888999999999999999999999999999999999999988888877776666555433222211
Q ss_pred HHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCCcccC
Q 000789 291 GTYGLAVWYGSKLIIEKGYNGGTVINVIMAIMTGGMSLGQTSPCLNAFAGGQAAAYKMFETIKRKPKIDPYDTSGITLEK 370 (1283)
Q Consensus 291 ~~~~~~~~~g~~~v~~~~~t~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~ 370 (1283)
..+.++++|++++.+|.+|+|.+++++.++.....|+..+...+..+.++.++++|+.++++.+++.+... .....
T Consensus 535 -~~~~~~~fg~~~v~~~~lt~g~vf~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~~L~~~~~~~~~~---~~~~~ 610 (1495)
T PLN03232 535 -VVVTLVSFGVFVLLGGDLTPARAFTSLSLFAVLRSPLNMLPNLLSQVVNANVSLQRIEELLLSEERILAQN---PPLQP 610 (1495)
T ss_pred -HHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccccc---CCcCC
Confidence 22334677889899999999999999988888889999988889999999999999999998655422111 11111
Q ss_pred ccccEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHHh
Q 000789 371 IEGEIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWIR 450 (1283)
Q Consensus 371 ~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r 450 (1283)
..+.|+++|++|+|++++++++|+|+||+|++||+++||||||||||||+++|+|+|+|++|.+. .+|
T Consensus 611 ~~~~I~~~~vsF~y~~~~~~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~G~i~------------~~~ 678 (1495)
T PLN03232 611 GAPAISIKNGYFSWDSKTSKPTLSDINLEIPVGSLVAIVGGTGEGKTSLISAMLGELSHAETSSV------------VIR 678 (1495)
T ss_pred CCCcEEEEeeEEEcCCCCCCceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCcccCCCEE------------Eec
Confidence 23479999999999854446799999999999999999999999999999999999999998763 256
Q ss_pred cccEEEccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHhc
Q 000789 451 EKIGLVSQEPILFATSLRENIAYGKENATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARAILK 530 (1283)
Q Consensus 451 ~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARal~~ 530 (1283)
++|+||+|+||+|++||||||+||.+ .++++++++++.|+++++++.+|+|++|.+||+|.+|||||||||+||||+++
T Consensus 679 ~~Iayv~Q~p~Lf~gTIreNI~fg~~-~~~e~~~~vl~~~~L~~di~~Lp~Gd~T~IGe~G~~LSGGQkQRIaLARAly~ 757 (1495)
T PLN03232 679 GSVAYVPQVSWIFNATVRENILFGSD-FESERYWRAIDVTALQHDLDLLPGRDLTEIGERGVNISGGQKQRVSMARAVYS 757 (1495)
T ss_pred CcEEEEcCccccccccHHHHhhcCCc-cCHHHHHHHHHHhCCHHHHHhCCCCCCceecCCCcccCHHHHHHHHHHHHHhc
Confidence 79999999999999999999999986 68899999999999999999999999999999999999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHH-HHHHHcCCCeEEEEecCchhhhccCEEEEEeCCEEeEecChhHHhcCCCChhHHH
Q 000789 531 NPKILLLDEATSALDAESERIVQD-ALVKIMTSRTTVVVAHRLTTIRNADLIAVVHQGKIVEKGTHDELIKDPEGPYTQL 609 (1283)
Q Consensus 531 ~~~illlDE~ts~lD~~~~~~i~~-~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~~~l~~~~~~~~~~~ 609 (1283)
+|+||||||||||||+++++++.+ ++....+++|+|+||||++.++.||+|++|++|+|+++|+|+||+++ ++.|.++
T Consensus 758 ~~~IlLLDEptSaLD~~t~~~I~~~~l~~~l~~kT~IlvTH~~~~l~~aD~Ii~L~~G~i~~~Gt~~eL~~~-~~~~~~l 836 (1495)
T PLN03232 758 NSDIYIFDDPLSALDAHVAHQVFDSCMKDELKGKTRVLVTNQLHFLPLMDRIILVSEGMIKEEGTFAELSKS-GSLFKKL 836 (1495)
T ss_pred CCCEEEEcCCccccCHHHHHHHHHHHhhhhhcCCEEEEEECChhhHHhCCEEEEEeCCEEEEecCHHHHHhc-chhHHHH
Confidence 999999999999999999997755 56666788999999999999999999999999999999999999986 7888888
Q ss_pred HHHhhcCchhhhhhhccccccCchhhhhhhhhcCCCCCCccccccccccCCCCCCccccccCCCCCCCccccccCCCCCC
Q 000789 610 VRLQEGSKEAEDALATDADKLDSSFDILDKAMTRSGSRGESMRRSISRHSSGSRHSFGFTYGVPGPINVFETEEGDQGGA 689 (1283)
Q Consensus 610 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 689 (1283)
+..+...++..+. ..+ .+. .. ...... . ... . .... .. ... ++. ...
T Consensus 837 ~~~~~~~~~~~~~---~~~-~~~-~~--------~~~~~~--~--~~~--~------~~~~--~~----~~~-~~~-~~~ 883 (1495)
T PLN03232 837 MENAGKMDATQEV---NTN-DEN-IL--------KLGPTV--T--IDV--S------ERNL--GS----TKQ-GKR-GRS 883 (1495)
T ss_pred HHhcccccccccc---ccc-ccc-cc--------cccccc--c--ccc--c------cccc--cc----ccc-ccc-chh
Confidence 7654321111000 000 000 00 000000 0 000 0 0000 00 000 000 000
Q ss_pred CCchhhHhhhhhHHHHHHHHhhcChhHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhh-hhhhHHHHHHHHHH
Q 000789 690 ERTPLMIEKRQKLSMRRLAYLNKPEFPVLL-IGSIAAGIHGVIFPIFGLLLSSSIRMFFEPEDKL-RKDSRFWALIYLVL 767 (1283)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l 767 (1283)
.....+.+..+.+.++.+.+|.+...+... ..++++.+. ..... .....+...|...... .....+|+.+|+++
T Consensus 884 ~~~~~e~~~~g~v~~~vy~~y~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~wl~~w~~~~~~~~~~~~~~l~~y~~l 959 (1495)
T PLN03232 884 VLVKQEERETGIISWNVLMRYNKAVGGLWVVMILLVCYLT---TEVLR-VSSSTWLSIWTDQSTPKSYSPGFYIVVYALL 959 (1495)
T ss_pred hhhhHHHHhcCcccHHHHHHHHHHcCcHHHHHHHHHHHHH---HHHHH-HHHHHHHHHHhcccCCCCCCcchHHHHHHHH
Confidence 000111222334455555555544222111 111111111 11111 1222222333321111 12345788899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHH
Q 000789 768 GIINLIAVPFQNYFFGVAGGKLIRRIRSLTFEKVVHQEISWFDDPANSSGSVGARLSTDASTIRSLVGDSLALVVQNIAT 847 (1283)
Q Consensus 768 ~~~~~l~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~ff~~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~ 847 (1283)
+++..++.+++.+++...+.+++.++|++++++++++|++||++ +++|++++|+++|++.++..++..+..++..++.
T Consensus 960 ~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~p~~ff~~--~~~G~ilnr~s~Di~~id~~l~~~~~~~~~~~~~ 1037 (1495)
T PLN03232 960 GFGQVAVTFTNSFWLISSSLHAAKRLHDAMLNSILRAPMLFFHT--NPTGRVINRFSKDIGDIDRNVANLMNMFMNQLWQ 1037 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeeCc--CCchHHHHHhHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999995 8999999999999999999999999888888888
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH---hHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHH
Q 000789 848 IAAGLIIAFTANWILAFVILAVSPLMLVQGYTQTKFM---KGFSADAKLMYEEASQVANDAVGSIRTVASFCSEEKVMDL 924 (1283)
Q Consensus 848 ~~~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~ 924 (1283)
+++.+++++..++...+ +++|+.+++...+..+. +...+......+...+++.|++.|++|||+|+.++++.++
T Consensus 1038 ~i~~~i~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~~~~~~~E~l~G~~tIraf~~~~~~~~~ 1114 (1495)
T PLN03232 1038 LLSTFALIGTVSTISLW---AIMPLLILFYAAYLYYQSTSREVRRLDSVTRSPIYAQFGEALNGLSSIRAYKAYDRMAKI 1114 (1495)
T ss_pred HHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhcChHHHhcCCcHHHHHHH
Confidence 87777777666653322 23344333322222221 2222223334445678999999999999999999998888
Q ss_pred HHHHHhcHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCc----CHHH-HHHHHHHHHHHHHHHHHHHH
Q 000789 925 YEKKCEGPLKNGVRRGILSGAGFGFSFLVLYCTNAFCFYIGSVLVE-HGKA----TFGQ-VFKVFFALTISALGVSQTSA 998 (1283)
Q Consensus 925 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~-~g~~----~~~~-~~~~~~~~~~~~~~~~~~~~ 998 (1283)
+.+..+...+......... .+..+. +..+...++++.+...+. .+.+ .+.. +..++.+......++..+..
T Consensus 1115 ~~~~~~~~~~~~~~~~~~~-~wl~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~l~~ 1191 (1495)
T PLN03232 1115 NGKSMDNNIRFTLANTSSN-RWLTIR--LETLGGVMIWLTATFAVLRNGNAENQAGFASTMGLLLSYTLNITTLLSGVLR 1191 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHH--HHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 8777766655433222111 111111 111222222233333333 2332 1122 22234444556667888888
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCCCCCCcCCcc--CCCcccEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcC
Q 000789 999 MAPDTTKAKDSAASIFEILDSKPKIDSSKDEGMTL--SSVGGAIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGE 1076 (1283)
Q Consensus 999 ~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~--~~~~g~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~ 1076 (1283)
.+.+++.++.+++|+.++++.+++.+.......++ .+..|.|+|+||+|+|+++ .++||+|+||+|+|||+||||||
T Consensus 1192 ~~~~~~~~~~s~eRi~e~~~~~~e~~~~~~~~~~~~~~p~~g~I~f~nVsf~Y~~~-~~~vL~~isl~I~~GekvaIVG~ 1270 (1495)
T PLN03232 1192 QASKAENSLNSVERVGNYIDLPSEATAIIENNRPVSGWPSRGSIKFEDVHLRYRPG-LPPVLHGLSFFVSPSEKVGVVGR 1270 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCccccccccCCCCCCCCCCCCcEEEEEEEEEECCC-CCcccccceEEEcCCCEEEEECC
Confidence 99999999999999999998776543211111111 1345789999999999643 35799999999999999999999
Q ss_pred CCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHhcceEEEccCCCCChhhHHHHHhcCCCCCCCHHHHHHHHHHh
Q 000789 1077 SGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMGLVSQEPVLFNETIRTNIAYGKQGGATEEEIIAATEAS 1156 (1283)
Q Consensus 1077 SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a 1156 (1283)
||||||||+++|+|+|+|++|+|+|||+|++++++++||++|++|||||+||+|||||||+++. +++|+|+++|++.+
T Consensus 1271 SGSGKSTL~~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~iVpQdp~LF~gTIr~NL~~~~--~~sdeei~~al~~a 1348 (1495)
T PLN03232 1271 TGAGKSSMLNALFRIVELEKGRIMIDDCDVAKFGLTDLRRVLSIIPQSPVLFSGTVRFNIDPFS--EHNDADLWEALERA 1348 (1495)
T ss_pred CCCCHHHHHHHHhCCCcCCCceEEECCEEhhhCCHHHHHhhcEEECCCCeeeCccHHHHcCCCC--CCCHHHHHHHHHHc
Confidence 9999999999999999999999999999999999999999999999999999999999999873 68999999999999
Q ss_pred ChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcCCceEEEEec
Q 000789 1157 NAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAH 1236 (1283)
Q Consensus 1157 ~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaH 1236 (1283)
+++|+|+++|+||||+|||+|.+|||||||||||||||+++|+|||||||||+||++||+.|+++|++.+++||+|+|||
T Consensus 1349 ~l~~~I~~lp~GLdt~v~e~G~~LSgGQrQrlaLARALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~~~~TvI~IAH 1428 (1495)
T PLN03232 1349 HIKDVIDRNPFGLDAEVSEGGENFSVGQRQLLSLARALLRRSKILVLDEATASVDVRTDSLIQRTIREEFKSCTMLVIAH 1428 (1495)
T ss_pred CCHHHHHhCcCCCCceecCCCCCCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEeC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CchHHhhcCEEEEEeCCEEEEecChHHHHhccCchhHHHHHHhhc
Q 000789 1237 RLTTIKNADIIAVVKNGVIAEQGSHDALMKITDGAYASLVALHVS 1281 (1283)
Q Consensus 1237 rl~ti~~~D~I~vl~~G~Ive~Gt~~eLl~~~~g~y~~L~~~~~~ 1281 (1283)
|++|+++||||+||++|+|+|+|+|+||+++++|.|++|++.+..
T Consensus 1429 Rl~ti~~~DrIlVL~~G~ivE~Gt~~eLl~~~~~~f~~l~~~~~~ 1473 (1495)
T PLN03232 1429 RLNTIIDCDKILVLSSGQVLEYDSPQELLSRDTSAFFRMVHSTGP 1473 (1495)
T ss_pred CHHHHHhCCEEEEEECCEEEEECCHHHHHhCCCCHHHHHHHHhCh
Confidence 999999999999999999999999999999756799999987754
No 6
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=4.2e-151 Score=1525.89 Aligned_cols=1186 Identities=19% Similarity=0.236 Sum_probs=870.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 54 IVGTISAIGSGLAHPFMTLIFGHLINSFGSSDRSHVVHEVSKVAVKFLYLAAGTGIAAFLQVSCWMVTGERQATRIRGLY 133 (1283)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~~ 133 (1283)
+.+++..++..++....|++++.++|.+........ .. ..++..++++.++.+++.....+...+.+.++...++..+
T Consensus 320 l~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~-~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~L~~~i 397 (1522)
T TIGR00957 320 LMSFCFKAIHDLMMFIGPQILSLLIRFVNDPMAPDW-QG-YFYTGLLFVCACLQTLILHQYFHICFVSGMRIKTAVMGAV 397 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccc-hH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555556666667778899999997643321111 11 1112222222223333333333445667888888999999
Q ss_pred HHHHHhCChhhHhccCCccHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Q 000789 134 LKTILRQDIGFFDTETTTGEVIGRMSGDTILIQEAMGEKVGKFIQLMSTFFGGFVVALARGWFLALVLLACLPAIVIAGG 213 (1283)
Q Consensus 134 ~~~ll~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~~~~ 213 (1283)
|+|+++++..++++. ++|+++|++++|++++.+.. ..+..+...++.+++++++++..-...+++.++++++++.+..
T Consensus 398 y~K~L~l~~~~~~~~-~~G~i~nl~s~D~~~i~~~~-~~~~~~~~~~~~i~~~~~ll~~~~g~~~l~~l~~~~~~~~~~~ 475 (1522)
T TIGR00957 398 YRKALVITNSARKSS-TVGEIVNLMSVDAQRFMDLA-TYINMIWSAPLQVILALYFLWLNLGPSVLAGVAVMVLMVPLNA 475 (1522)
T ss_pred HHHHHhCChhhcCCC-CHHHHHHHHHHhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 999999999999876 89999999999999998855 3344444444444444443332222233444555566666677
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 214 SMALIMSKMSSRGQIAYSEAGTVVEQTVSGIRTVSSFTGEKQAIEKYNNKLQVAYRAAVQQGMVSGIGLGVLMLTVIGTY 293 (1283)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (1283)
++.+++++..++.++..+++.+.+.|.++||++||+|++|+.+.+++++.++++.+...+......+......... ..
T Consensus 476 ~~~~~~~~~~~~~~~~~d~r~~~~~E~l~~ik~IK~~~~e~~~~~~i~~~r~~e~~~~~~~~~~~~~~~~~~~~~~--~~ 553 (1522)
T TIGR00957 476 VMAMKTKTYQVAHMKSKDNRIKLMNEILNGIKVLKLYAWELAFLDKVEGIRQEELKVLKKSAYLHAVGTFTWVCTP--FL 553 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HH
Confidence 7888888889999999999999999999999999999999999999999988887776665555444332221111 11
Q ss_pred HHHHHHHHHHHHh--cCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCCcccCc
Q 000789 294 GLAVWYGSKLIIE--KGYNGGTVINVIMAIMTGGMSLGQTSPCLNAFAGGQAAAYKMFETIKRKPKIDPYDTSGITLEKI 371 (1283)
Q Consensus 294 ~~~~~~g~~~v~~--~~~t~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~ 371 (1283)
+.++.++.+.+.. +.++.+.+++.+.++.....|+..+...+..+.++.++.+|+.++++.+++.+.........+..
T Consensus 554 ~~~~~f~~~~~~~~~~~l~~~~~f~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~~l~~~~~~~~~~~~~~~~~~~ 633 (1522)
T TIGR00957 554 VALITFAVYVTVDENNILDAEKAFVSLALFNILRFPLNILPMVISSIVQASVSLKRLRIFLSHEELEPDSIERRTIKPGE 633 (1522)
T ss_pred HHHHHHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccccccccccCCCC
Confidence 2222345555553 56888988888877777788999999999999999999999999998654322110000000111
Q ss_pred cccEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHHhc
Q 000789 372 EGEIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWIRE 451 (1283)
Q Consensus 372 ~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~ 451 (1283)
.+.|+++|++|+|++. +.++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.+||
T Consensus 634 ~~~i~~~~~~~~~~~~-~~~~l~~isl~i~~G~~v~IvG~~GsGKSTLl~~l~g~~~~~~G~i~~~g------------- 699 (1522)
T TIGR00957 634 GNSITVHNATFTWARD-LPPTLNGITFSIPEGALVAVVGQVGCGKSSLLSALLAEMDKVEGHVHMKG------------- 699 (1522)
T ss_pred CCcEEEEEeEEEcCCC-CCceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCccCCcEEEECC-------------
Confidence 2379999999999743 34699999999999999999999999999999999999999999999997
Q ss_pred ccEEEccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHhcC
Q 000789 452 KIGLVSQEPILFATSLRENIAYGKENATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARAILKN 531 (1283)
Q Consensus 452 ~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARal~~~ 531 (1283)
+|+||+|+||+|++||+|||.+|.+ .+++++.++++.+++.+++..+|+|++|.+|++|.+|||||||||+||||++++
T Consensus 700 ~i~yv~Q~~~l~~~Ti~eNI~~g~~-~~~~~~~~~~~~~~l~~~l~~~~~g~~t~ig~~g~~LSGGQkqRiaLARAl~~~ 778 (1522)
T TIGR00957 700 SVAYVPQQAWIQNDSLRENILFGKA-LNEKYYQQVLEACALLPDLEILPSGDRTEIGEKGVNLSGGQKQRVSLARAVYSN 778 (1522)
T ss_pred EEEEEcCCccccCCcHHHHhhcCCc-cCHHHHHHHHHHhCCHHHHHhcCCCCCceecCCCCCCCHHHHHHHHHHHHHhcC
Confidence 6999999999999999999999976 456778888999999999999999999999999999999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHH---HcCCCeEEEEecCchhhhccCEEEEEeCCEEeEecChhHHhcCCCChhHH
Q 000789 532 PKILLLDEATSALDAESERIVQDALVK---IMTSRTTVVVAHRLTTIRNADLIAVVHQGKIVEKGTHDELIKDPEGPYTQ 608 (1283)
Q Consensus 532 ~~illlDE~ts~lD~~~~~~i~~~l~~---~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~~~l~~~~~~~~~~ 608 (1283)
|+|+|||||||+||+++++.+.+.+.+ +.+++|+|+|||+++.+..||+|++|++|+|+++|+|++++++ ++.|.+
T Consensus 779 ~~illLDEp~saLD~~~~~~i~~~l~~~~~~~~~~tvIlvTH~~~~l~~~D~ii~l~~G~i~~~g~~~~l~~~-~~~~~~ 857 (1522)
T TIGR00957 779 ADIYLFDDPLSAVDAHVGKHIFEHVIGPEGVLKNKTRILVTHGISYLPQVDVIIVMSGGKISEMGSYQELLQR-DGAFAE 857 (1522)
T ss_pred CCEEEEcCCccccCHHHHHHHHHHHhhhhhhhcCCEEEEEeCChhhhhhCCEEEEecCCeEEeeCCHHHHHhc-chhHHH
Confidence 999999999999999999999998864 4568999999999999999999999999999999999999976 677888
Q ss_pred HHHHhhcCchhhhhhhc--cccccCchhhhh-hhhhcCCCCCCccccccccccCCCCCCccccccCCCCCCCccccccCC
Q 000789 609 LVRLQEGSKEAEDALAT--DADKLDSSFDIL-DKAMTRSGSRGESMRRSISRHSSGSRHSFGFTYGVPGPINVFETEEGD 685 (1283)
Q Consensus 609 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 685 (1283)
+...+......+..... .....+...... +...................... . . ..... ........+..+..
T Consensus 858 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~-~~~~~-~~~~~~~~~~~~~~ 933 (1522)
T TIGR00957 858 FLRTYAPDEQQGHLEDSWTALVSGEGKEAKLIENGMLVTDVVGKQLQRQLSASSS-D-S-GDQSR-HHGSSAELQKAEAK 933 (1522)
T ss_pred HHHhhccccccccccccccccccccccccccccccccccccccchhhhhcccccc-c-c-ccccc-cccccccccccccc
Confidence 77644321111000000 000000000000 00000000000000000000000 0 0 00000 00000000000000
Q ss_pred CCCCCCchhhHhhhhhHHHHHHHHhhcCh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCch---hhhhhhHHHH
Q 000789 686 QGGAERTPLMIEKRQKLSMRRLAYLNKPE-FPVLLIGSIAAGIHGVIFPIFGLLLSSSIRMFFEPED---KLRKDSRFWA 761 (1283)
Q Consensus 686 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 761 (1283)
.........+.+..+.+.++.+.+|.+.. +...++.+++..+..++... ...+...|.... .......+|.
T Consensus 934 ~~~~~~~~~e~~~~g~v~~~~y~~Y~~~~g~~~~~~~~~~~~~~~~~~~~-----~~~~l~~w~~~~~~~~~~~~~~~~~ 1008 (1522)
T TIGR00957 934 EETWKLMEADKAQTGQVELSVYWDYMKAIGLFITFLSIFLFVCNHVSALA-----SNYWLSLWTDDPMVNGTQNNTSLRL 1008 (1522)
T ss_pred cchhhhHHHHHHhcCcccHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHhccccccCCCCCcchHH
Confidence 00000001111222333444444444322 22211111111111111111 122222232111 0112234567
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChhHHHHHHhhhHHHHHHHHHHHHHHH
Q 000789 762 LIYLVLGIINLIAVPFQNYFFGVAGGKLIRRIRSLTFEKVVHQEISWFDDPANSSGSVGARLSTDASTIRSLVGDSLALV 841 (1283)
Q Consensus 762 ~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~ff~~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~ 841 (1283)
.+|++++++..++.++..+++...+.+++.++|++++++++++|++|||+ +++|+++||+++|++.++..++..+..+
T Consensus 1009 ~iy~~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~--~~~G~ilnR~s~Di~~id~~l~~~~~~~ 1086 (1522)
T TIGR00957 1009 SVYGALGILQGFAVFGYSMAVSIGGIQASRVLHQDLLHNKLRSPMSFFER--TPSGNLVNRFSKELDTVDSMIPPVIKMF 1086 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHhcc--CChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78888899888888888899999999999999999999999999999995 8999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHH
Q 000789 842 VQNIATIAAGLIIAFTANWILAFVILAVSPLMLVQGYTQTKFMKGFSADAKLMYEEASQVANDAVGSIRTVASFCSEEKV 921 (1283)
Q Consensus 842 ~~~~~~~~~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~ 921 (1283)
+..++.+++.++++++.+|+++++++++++++.+...++.+..+...+......+...+++.|++.|++|||+|+.++++
T Consensus 1087 ~~~~~~~i~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~l~~~~~E~l~Gi~tIraf~~~~~f 1166 (1522)
T TIGR00957 1087 MGSLFNVIGALIVILLATPIAAVIIPPLGLLYFFVQRFYVASSRQLKRLESVSRSPVYSHFNETLLGVSVIRAFEEQERF 1166 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhCCcHHHHHhhhHHHH
Confidence 99999998888888888887655554444443333322222223323333344456689999999999999999999999
Q ss_pred HHHHHHHHhcHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCcCHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 922 MDLYEKKCEGPLKNGVRRGILSGAGFGFSFLVLYCTNAFCFYIGSVLV-EHGKATFGQVFKVFFALTISALGVSQTSAMA 1000 (1283)
Q Consensus 922 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1000 (1283)
.+++.+..+...+..........+......++ ...++++++...+ ..|.++.|.+..++.+......++..+...+
T Consensus 1167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~v~~~~~~~~g~l~~~l~~~~~~~~~l~~l~~~~ 1243 (1522)
T TIGR00957 1167 IHQSDLKVDENQKAYYPSIVANRWLAVRLECV---GNCIVLFAALFAVISRHSLSAGLVGLSVSYSLQVTFYLNWLVRMS 1243 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998888776554433332222222222 2223334444444 3678999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCCCCCCcCCcc--CCCcccEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCC
Q 000789 1001 PDTTKAKDSAASIFEILDSKPKIDSSKDEGMTL--SSVGGAIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESG 1078 (1283)
Q Consensus 1001 ~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~--~~~~g~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SG 1078 (1283)
.+++.++.+++|+.++.+.+++.+...+...++ .+..|.|+|+||+|+|+++ .++||+||||+|+|||+||||||||
T Consensus 1244 ~~~e~~~~s~eRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~~-~~~vL~~is~~I~~GekiaIVGrTG 1322 (1522)
T TIGR00957 1244 SEMETNIVAVERLKEYSETEKEAPWQIQETAPPSGWPPRGRVEFRNYCLRYRED-LDLVLRHINVTIHGGEKVGIVGRTG 1322 (1522)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCccccccCCCCCCCCCCCCcEEEEEEEEEeCCC-CcccccceeEEEcCCCEEEEECCCC
Confidence 999999999999999997766543111111111 1356889999999999854 3479999999999999999999999
Q ss_pred CCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHhcceEEEccCCCCChhhHHHHHhcCCCCCCCHHHHHHHHHHhCh
Q 000789 1079 SGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMGLVSQEPVLFNETIRTNIAYGKQGGATEEEIIAATEASNA 1158 (1283)
Q Consensus 1079 SGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l 1158 (1283)
||||||+++|+|+|+|++|+|+|||+||+++++++||++|++|||||+||+|||||||++. ++++|+|+|+|++.+++
T Consensus 1323 sGKSTL~~lL~rl~~~~~G~I~IdG~dI~~i~~~~LR~~i~iVpQdp~LF~gTIr~NLdp~--~~~sdeei~~al~~a~l 1400 (1522)
T TIGR00957 1323 AGKSSLTLGLFRINESAEGEIIIDGLNIAKIGLHDLRFKITIIPQDPVLFSGSLRMNLDPF--SQYSDEEVWWALELAHL 1400 (1522)
T ss_pred CCHHHHHHHHhcCccCCCCeEEECCEEccccCHHHHHhcCeEECCCCcccCccHHHHcCcc--cCCCHHHHHHHHHHcCc
Confidence 9999999999999999999999999999999999999999999999999999999999854 26999999999999999
Q ss_pred HHHHHhCCCCcccccCCCCCCCChhHHHHHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcCCceEEEEecCc
Q 000789 1159 HNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRL 1238 (1283)
Q Consensus 1159 ~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl 1238 (1283)
+++|.++|+||||+|||+|.+|||||||||||||||+++|+|||||||||+||++||+.|+++|++.+++||+|+||||+
T Consensus 1401 ~~~I~~lp~GLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~l~~~~~~~TvI~IAHRl 1480 (1522)
T TIGR00957 1401 KTFVSALPDKLDHECAEGGENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQSTIRTQFEDCTVLTIAHRL 1480 (1522)
T ss_pred HHHHhhCccCCCceecCCCCcCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHhhcCEEEEEeCCEEEEecChHHHHhccCchhHHHHHHh
Q 000789 1239 TTIKNADIIAVVKNGVIAEQGSHDALMKITDGAYASLVALH 1279 (1283)
Q Consensus 1239 ~ti~~~D~I~vl~~G~Ive~Gt~~eLl~~~~g~y~~L~~~~ 1279 (1283)
+++.+||||+||++|+|+|+|+|+||+++ +|.|++|+++.
T Consensus 1481 ~ti~~~DrIlVld~G~IvE~G~~~eLl~~-~~~f~~l~~~~ 1520 (1522)
T TIGR00957 1481 NTIMDYTRVIVLDKGEVAEFGAPSNLLQQ-RGIFYSMAKDA 1520 (1522)
T ss_pred HHHHhCCEEEEEECCEEEEECCHHHHHhC-CCHHHHHHHHc
Confidence 99999999999999999999999999997 89999999874
No 7
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=6.2e-145 Score=1460.02 Aligned_cols=1169 Identities=17% Similarity=0.216 Sum_probs=868.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 53 MIVGTISAIGSGLAHPFMTLIFGHLINSFGSSDRSHVVHEVSKVAVKFLYLAAGTGIAAFLQVSCWMVTGERQATRIRGL 132 (1283)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~ 132 (1283)
++..++..++..++....|++++.+++.+...+.. + .....+++.+++..++..++.....+...+.+.++...++..
T Consensus 246 ~~~~~~~~l~~~~~~l~~P~ll~~~v~~l~~~~~~-~-~~g~~l~~~l~~~~~~~~~~~~~~~~~~~r~~~~~r~~L~~~ 323 (1560)
T PTZ00243 246 VWWQIPFKLLSDVCTLTLPVLLKYFVKFLDADNAT-W-GRGLGLVLTLFLTQLIQSVCLHRFYYISIRCGLQYRSALNAL 323 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcc-h-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556666677777777888899999877433211 1 111111222222333344444444455566777777788888
Q ss_pred HHHHHHhCChhhHhc-cCCccHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Q 000789 133 YLKTILRQDIGFFDT-ETTTGEVIGRMSGDTILIQEAMGEKVGKFIQLMSTFFGGFVVALARGWFLALVLLACLPAIVIA 211 (1283)
Q Consensus 133 ~~~~ll~~~~~~f~~-~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~~ 211 (1283)
+|+|+++++...+.+ ..++|+++|++++|++.+.+++.. +..++...+.++++++++..+..+.+++.++++++++.+
T Consensus 324 if~K~l~ls~~~~~~~~~~~G~i~nl~s~Dv~~i~~~~~~-~~~l~~~Pl~li~~~~lL~~~lG~~al~gv~vl~v~~pl 402 (1560)
T PTZ00243 324 IFEKCFTISSKSLAQPDMNTGRIINMMSTDVERINSFMQY-CMYLWSSPMVLLLSILLLSRLVGWCALMAVAVLLVTLPL 402 (1560)
T ss_pred HHHHHHhCChhhhCCCCCCHHHHHHHHHHhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 999999999877741 127899999999999999999844 455666777777767766666555777777777777788
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 212 GGSMALIMSKMSSRGQIAYSEAGTVVEQTVSGIRTVSSFTGEKQAIEKYNNKLQVAYRAAVQQGMVSGIGLGVLMLTVIG 291 (1283)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (1283)
..++.++..+..++..+..+++.+.+.|.++|||+||.++||+.+.+++.+.++++.+...+......+...+......+
T Consensus 403 ~~~~~k~~~~~~~~~~~~~D~Ri~~~~E~l~gIr~IK~~~wE~~f~~ri~~~R~~El~~l~~~~~~~~~~~~~~~~~p~l 482 (1560)
T PTZ00243 403 NGAIMKHQMAARRKIAKAADARVKATNEFFSGIRIAKFMAWEPCFVANIEDKRARELRYLRDVQLARVATSFVNNATPTL 482 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88889999999999999999999999999999999999999999999999999988888777766666554443333322
Q ss_pred HHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCC----CC-C----
Q 000789 292 TYGLAVWYGSKLIIEKGYNGGTVINVIMAIMTGGMSLGQTSPCLNAFAGGQAAAYKMFETIKRKPKID----PY-D---- 362 (1283)
Q Consensus 292 ~~~~~~~~g~~~v~~~~~t~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~----~~-~---- 362 (1283)
.. ++.++.+.+..+.+|++.+++++.++..+..|+..+...+..+.++.+|++||.++|+.++... +. .
T Consensus 483 ~~--~~~f~~y~~~g~~Lt~~~vft~laL~~~L~~Pl~~lp~~~~~~~~a~vS~~RI~~fL~~~e~~~~~~~~~~~~~~~ 560 (1560)
T PTZ00243 483 MI--AVVFTVYYLLGHELTPEVVFPTIALLGVLRMPFFMIPWVFTTVLQFLVSIKRISTFLECDNATCSTVQDMEEYWRE 560 (1560)
T ss_pred HH--HHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccccccccccchhhccc
Confidence 22 2245667778889999999999999888889999999999999999999999999997543100 00 0
Q ss_pred -----CC-C---------------C---------------------------cccCccccEEEEEEEEECCCC-------
Q 000789 363 -----TS-G---------------I---------------------------TLEKIEGEIELRDVYFRYPAR------- 387 (1283)
Q Consensus 363 -----~~-~---------------~---------------------------~~~~~~~~i~~~~v~f~y~~~------- 387 (1283)
.. . . ......+.+.++|++|+++..
T Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (1560)
T PTZ00243 561 QREHSTACQLAAVLENVDVTAFVPVKLPRAPKVKTSLLSRALRMLCCEQCRPTKRHPSPSVVVEDTDYGSPSSASRHIVE 640 (1560)
T ss_pred ccccccccccccccccccccccccccccccccccccccccchhhcccccccccccccccccccccccccccccccccccc
Confidence 00 0 0 000011357788887765310
Q ss_pred ------------------------------CCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEEC
Q 000789 388 ------------------------------PEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLID 437 (1283)
Q Consensus 388 ------------------------------~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~ 437 (1283)
.++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++
T Consensus 641 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~isl~i~~G~~~~IiG~nGsGKSTLL~~i~G~~~~~~G~i~~~ 720 (1560)
T PTZ00243 641 GGTGGGHEATPTSERSAKTPKMKTDDFFELEPKVLLRDVSVSVPRGKLTVVLGATGSGKSTLLQSLLSQFEISEGRVWAE 720 (1560)
T ss_pred ccccccccccccccccccccccccccccccCCceeEeeeEEEECCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEEC
Confidence 12458999999999999999999999999999999999999999999874
Q ss_pred CcccCCCCHHHHhcccEEEccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChH
Q 000789 438 GIDIKKLQLKWIREKIGLVSQEPILFATSLRENIAYGKENATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGG 517 (1283)
Q Consensus 438 g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgG 517 (1283)
++||||+|+|++|++||+|||.++.+ .+.+++.++++.++++++++.+|+|++|.+|++|.+||||
T Consensus 721 -------------~~i~yv~Q~~~l~~~Tv~enI~~~~~-~~~~~~~~~~~~~~l~~~l~~l~~g~~t~i~~~g~~LSGG 786 (1560)
T PTZ00243 721 -------------RSIAYVPQQAWIMNATVRGNILFFDE-EDAARLADAVRVSQLEADLAQLGGGLETEIGEKGVNLSGG 786 (1560)
T ss_pred -------------CeEEEEeCCCccCCCcHHHHHHcCCh-hhHHHHHHHHHHhhhHHHHHHhhccchHHhcCCCCCCCHH
Confidence 37999999999999999999999865 3456678888889999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHH-HHHHcCCCeEEEEecCchhhhccCEEEEEeCCEEeEecChh
Q 000789 518 QKQRIAIARAILKNPKILLLDEATSALDAESERIVQDA-LVKIMTSRTTVVVAHRLTTIRNADLIAVVHQGKIVEKGTHD 596 (1283)
Q Consensus 518 qkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~-l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~~ 596 (1283)
|||||+|||||+.+|+|||||||||+||+++++.+.+. +....+++|+|+|||+++.+..||+|++|++|+++++|+++
T Consensus 787 QkqRvaLARAl~~~p~illLDEP~saLD~~~~~~i~~~~~~~~~~~~TvIlvTH~~~~~~~ad~ii~l~~G~i~~~G~~~ 866 (1560)
T PTZ00243 787 QKARVSLARAVYANRDVYLLDDPLSALDAHVGERVVEECFLGALAGKTRVLATHQVHVVPRADYVVALGDGRVEFSGSSA 866 (1560)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHhhCCCEEEEEeCCHHHHHhCCEEEEEECCEEEEecCHH
Confidence 99999999999999999999999999999998877654 44455689999999999999999999999999999999999
Q ss_pred HHhcCCCChhHHHHHHhhcCchhhhhhhccccccCchhhhhhhhhcCCCCCCccccccccccCCCCCCccccccCCCCCC
Q 000789 597 ELIKDPEGPYTQLVRLQEGSKEAEDALATDADKLDSSFDILDKAMTRSGSRGESMRRSISRHSSGSRHSFGFTYGVPGPI 676 (1283)
Q Consensus 597 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (1283)
++++. +.|.++........+..+. ....+... .+. ... .... ...... ....... .
T Consensus 867 ~l~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~------~~~-~~~~----~~~~~~--~~~~~~~----~-- 922 (1560)
T PTZ00243 867 DFMRT--SLYATLAAELKENKDSKEG-DADAEVAE--VDA------APG-GAVD----HEPPVA--KQEGNAE----G-- 922 (1560)
T ss_pred HHHhC--hHHHHHHHhhccccccccc-cccccccc--ccc------ccc-cccc----cccccc--ccccccc----c--
Confidence 99864 4576665432211110000 00000000 000 000 0000 000000 0000000 0
Q ss_pred CccccccCCCCCCCCchhhHhhhhhHHHHHHHHhhcChhHHHH-HHHHHH-HHHHHHHHHHHHHHHHHHHHhcCCchhhh
Q 000789 677 NVFETEEGDQGGAERTPLMIEKRQKLSMRRLAYLNKPEFPVLL-IGSIAA-GIHGVIFPIFGLLLSSSIRMFFEPEDKLR 754 (1283)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 754 (1283)
.+..............+.+..+.+.++.+..|.+....... +..++. .+..++ ......+...|... ...
T Consensus 923 --~~~~~~~~~~~~l~~~e~~~~g~v~~~~y~~Y~~~~g~~~~~~~~l~~~~~~~~~-----~~~~~~wl~~w~~~-~~~ 994 (1560)
T PTZ00243 923 --GDGAALDAAAGRLMTREEKASGSVPWSTYVAYLRFCGGLHAAGFVLATFAVTELV-----TVSSGVWLSMWSTR-SFK 994 (1560)
T ss_pred --ccccccccccchhhhHHHHhcCcccHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH-----HHHHHHHHHHhccc-ccC
Confidence 00000000000000111112233344444444332111111 111111 111111 11112222233321 112
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChhHHHHHHhhhHHHHHHHH
Q 000789 755 KDSRFWALIYLVLGIINLIAVPFQNYFFGVAGGKLIRRIRSLTFEKVVHQEISWFDDPANSSGSVGARLSTDASTIRSLV 834 (1283)
Q Consensus 755 ~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~ff~~~~~~~G~l~~rl~~D~~~i~~~~ 834 (1283)
.....|+.+|+++.++..++.++..+.....+.+...++|+.+|++++++|+.|||+ +++|+++||+++|++.+++.+
T Consensus 995 ~~~~~~l~~y~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ffd~--~~~G~ilnR~s~Di~~id~~l 1072 (1560)
T PTZ00243 995 LSAATYLYVYLGIVLLGTFSVPLRFFLSYEAMRRGSRNMHRDLLRSVSRGTMSFFDT--TPLGRILNRFSRDIDILDNTL 1072 (1560)
T ss_pred CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhccC--CCccHHHHHHHhhHHHHHHHH
Confidence 223456777887777777777777777777788888999999999999999999995 899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH----HHHHHHHHHHHHHHhhhH
Q 000789 835 GDSLALVVQNIATIAAGLIIAFTANWILAFVILAVSPLMLVQGYTQTKFMKGFSADAK----LMYEEASQVANDAVGSIR 910 (1283)
Q Consensus 835 ~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~e~l~gi~ 910 (1283)
+..+..++..++.+++.++++++.+|.+.+ +++|+.++..++...+ .+..++.+ ...+...+++.|++.|++
T Consensus 1073 ~~~l~~~~~~~~~~i~~li~~~~~~p~~~~---~~i~~~~~~~~i~~~~-~~~~r~~~r~~~~~~s~l~s~~~E~l~G~~ 1148 (1560)
T PTZ00243 1073 PMSYLYLLQCLFSICSSILVTSASQPFVLV---ALVPCGYLYYRLMQFY-NSANREIRRIKSVAKSPVFTLLEEALQGSA 1148 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhhcHHHHHHHHHHcCHH
Confidence 999999999999998888888888874433 3334433332222222 22334443 345566899999999999
Q ss_pred HHHHhccHHHHHHHHHHHHhcHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHhcCCcCHHHHHHHHHHHHH
Q 000789 911 TVASFCSEEKVMDLYEKKCEGPLKNGVRRGILSGAGFGFSFLVLYCTNAFCFYIGSV--LVEHGKATFGQVFKVFFALTI 988 (1283)
Q Consensus 911 tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--l~~~g~~~~~~~~~~~~~~~~ 988 (1283)
|||+|+.++.+.++|.+..+...+..........+......++..+...++.+++.. +...+.+++|.+..++.+...
T Consensus 1149 tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~l~~a~~ 1228 (1560)
T PTZ00243 1149 TITAYGKAHLVMQEALRRLDVVYSCSYLENVANRWLGVRVEFLSNIVVTVIALIGVIGTMLRATSQEIGLVSLSLTMAMQ 1228 (1560)
T ss_pred HHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHH
Confidence 999999999999999999998887766554444333333333333333333333332 333455778887777777788
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCC-------------------------CcCC----ccCCCccc
Q 000789 989 SALGVSQTSAMAPDTTKAKDSAASIFEILDSKPKIDSSK-------------------------DEGM----TLSSVGGA 1039 (1283)
Q Consensus 989 ~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~-------------------------~~~~----~~~~~~g~ 1039 (1283)
...++..+...+.+++.++.+++|+.++++..|+++... +... +.+...|.
T Consensus 1229 l~~~l~~l~~~~~~le~~~~s~eRi~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 1308 (1560)
T PTZ00243 1229 TTATLNWLVRQVATVEADMNSVERLLYYTDEVPHEDMPELDEEVDALERRTGMAADVTGTVVIEPASPTSAAPHPVQAGS 1308 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccccccccccccccccccccccccccCCCcccCCCCCCCCe
Confidence 889999999999999999999999999997543321000 0000 01123578
Q ss_pred EEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHhcceE
Q 000789 1040 IELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMG 1119 (1283)
Q Consensus 1040 I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~ 1119 (1283)
|+|+||+|+|++. .++||+||||+|+|||+||||||||||||||+++|+|+|+|++|+|+|||+||+++++++||++|+
T Consensus 1309 I~f~nVsf~Y~~~-~~~vL~~vsf~I~~GekVaIVGrTGSGKSTLl~lLlrl~~p~~G~I~IDG~di~~i~l~~LR~~I~ 1387 (1560)
T PTZ00243 1309 LVFEGVQMRYREG-LPLVLRGVSFRIAPREKVGIVGRTGSGKSTLLLTFMRMVEVCGGEIRVNGREIGAYGLRELRRQFS 1387 (1560)
T ss_pred EEEEEEEEEeCCC-CCceeecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccCCHHHHHhcce
Confidence 9999999999754 356999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEccCCCCChhhHHHHHhcCCCCCCCHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHHHHHccC-C
Q 000789 1120 LVSQEPVLFNETIRTNIAYGKQGGATEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKN-P 1198 (1283)
Q Consensus 1120 ~V~Qdp~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiARAll~~-p 1198 (1283)
+|||||+||+|||||||+++ ++++|+|+|+||+.++++++|.++|+||||.|||+|.+|||||||||||||||+++ |
T Consensus 1388 iVpQdp~LF~gTIreNIdp~--~~~sdeeI~~Al~~a~l~~~I~~lp~Gldt~vge~G~nLSgGQrQrLaLARALL~~~~ 1465 (1560)
T PTZ00243 1388 MIPQDPVLFDGTVRQNVDPF--LEASSAEVWAALELVGLRERVASESEGIDSRVLEGGSNYSVGQRQLMCMARALLKKGS 1465 (1560)
T ss_pred EECCCCccccccHHHHhCcc--cCCCHHHHHHHHHHCCChHHHhhCcccccccccCCcCcCCHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999875 36899999999999999999999999999999999999999999999999999995 8
Q ss_pred CEEEEecccCCCCHHHHHHHHHHHHHHcCCceEEEEecCchHHhhcCEEEEEeCCEEEEecChHHHHhccCchhHHHHHH
Q 000789 1199 KILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALMKITDGAYASLVAL 1278 (1283)
Q Consensus 1199 ~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~~D~I~vl~~G~Ive~Gt~~eLl~~~~g~y~~L~~~ 1278 (1283)
+|||||||||+||++||+.|+++|++.+++||+|+||||++++++||+|+||++|+|+|+|+|+||+++++|.|++|++.
T Consensus 1466 ~ILlLDEATSaLD~~te~~Iq~~L~~~~~~~TvI~IAHRl~ti~~~DrIlVLd~G~VvE~Gt~~eLl~~~~~~f~~l~~~ 1545 (1560)
T PTZ00243 1466 GFILMDEATANIDPALDRQIQATVMSAFSAYTVITIAHRLHTVAQYDKIIVMDHGAVAEMGSPRELVMNRQSIFHSMVEA 1545 (1560)
T ss_pred CEEEEeCCCccCCHHHHHHHHHHHHHHCCCCEEEEEeccHHHHHhCCEEEEEECCEEEEECCHHHHHhCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999998668999999987
Q ss_pred hhc
Q 000789 1279 HVS 1281 (1283)
Q Consensus 1279 ~~~ 1281 (1283)
+..
T Consensus 1546 ~~~ 1548 (1560)
T PTZ00243 1546 LGR 1548 (1560)
T ss_pred hCh
Confidence 653
No 8
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=7.1e-142 Score=1431.20 Aligned_cols=1175 Identities=16% Similarity=0.198 Sum_probs=839.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 59 SAIGSGLAHPFMTLIFGHLINSFGSSDRSHVVHEVSKVAVKFLYLAAGTGIAAFLQVSCWMVTGERQATRIRGLYLKTIL 138 (1283)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~~~~~ll 138 (1283)
..++..++....|++++.+++.+...+... ......+++.++++.++..++.....+.....+.++...+...+|+|++
T Consensus 88 ~~~~~~~~~~~~P~ll~~li~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~r~~L~~~iy~K~L 166 (1490)
T TIGR01271 88 LLYFGEATKAVQPLLLGRIIASYDPFNAPE-REIAYYLALGLCLLFIVRTLLLHPAIFGLHHLGMQMRIALFSLIYKKTL 166 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCCCc-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334445566667788999999873221110 0111112222222233333444444444555666666666677799999
Q ss_pred hCChhhHhccCCccHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 139 RQDIGFFDTETTTGEVIGRMSGDTILIQEAMGEKVGKFIQLMSTFFGGFVVALARGWFLALVLLACLPAIVIAGGSMALI 218 (1283)
Q Consensus 139 ~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~ 218 (1283)
+++...+++. ++|+++|++++|++.+.+.+... ..+....+.+++++++++....+.+++.++++++++.+..+++++
T Consensus 167 ~l~~~~~~~~-~~g~i~nl~s~Dv~~i~~~~~~~-~~~~~~pi~i~~~~~lL~~~~G~~~l~~l~v~~~~~~~~~~~~~~ 244 (1490)
T TIGR01271 167 KLSSRVLDKI-STGQLVSLLSNNLNKFDEGLALA-HFVWIAPLQVILLMGLIWELLEVNGFCGLGFLILLALFQACLGQK 244 (1490)
T ss_pred hCCHHHhcCC-CHHHHHHHHHHhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999875 89999999999999999977543 334445555555555555555556777788888888888999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 219 MSKMSSRGQIAYSEAGTVVEQTVSGIRTVSSFTGEKQAIEKYNNKLQVAYRAAVQQGMVSGIGLGVLMLTVIGTYGLAVW 298 (1283)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (1283)
+.+..++.++..+++.+.+.|.++||++||+|+||+.+.+++.+.++.+.+...+...+..+...+..+.. ..+.++.
T Consensus 245 ~~~~~~~~~~~~d~R~~~~~E~l~~ik~IK~~~~E~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 322 (1490)
T TIGR01271 245 MMPYRDKRAGKISERLAITSEIIENIQSVKAYCWEEAMEKIIKNIRQDELKLTRKIAYLRYFYSSAFFFSG--FFVVFLS 322 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHH
Confidence 99999999999999999999999999999999999999999999999888887776665544333322222 2233445
Q ss_pred HHHHHHHhcCccHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCCcccCccccEEE
Q 000789 299 YGSKLIIEKGYNGGTVINVIMAIMTGGMSLG-QTSPCLNAFAGGQAAAYKMFETIKRKPKIDPYDTSGITLEKIEGEIEL 377 (1283)
Q Consensus 299 ~g~~~v~~~~~t~g~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~i~~ 377 (1283)
++.+.+..+ ++++.+++++.++..+..|+. .+...+..+.++.++++||.++|+.++..+... ......|++
T Consensus 323 f~~y~~~~~-~~~~~~ft~lal~~lL~~~l~~~lp~~~~~~~~a~~s~~RI~~fL~~~e~~~~~~------~~~~~~i~~ 395 (1490)
T TIGR01271 323 VVPYALIKG-IILRRIFTTISYCIVLRMTVTRQFPGAIQTWYDSLGAITKIQDFLCKEEYKTLEY------NLTTTEVEM 395 (1490)
T ss_pred HHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccc------cCCCCceEE
Confidence 566665544 678888888877776667764 566778899999999999999997654321110 011235999
Q ss_pred EEEEEECCCCC-------------------------------CCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcC
Q 000789 378 RDVYFRYPARP-------------------------------EVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERF 426 (1283)
Q Consensus 378 ~~v~f~y~~~~-------------------------------~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~ 426 (1283)
+|++|.|+... .+++|+|+||+|++|++++|+||||||||||+++|+|+
T Consensus 396 ~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~i~l~i~~G~~~~I~G~~GsGKSTLl~~l~G~ 475 (1490)
T TIGR01271 396 VNVTASWDEGIGELFEKIKQNNKARKQPNGDDGLFFSNFSLYVTPVLKNISFKLEKGQLLAVAGSTGSGKSSLLMMIMGE 475 (1490)
T ss_pred ecceEecCCccccccccccccccccccccccccccccccccccCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCC
Confidence 99999995310 13589999999999999999999999999999999999
Q ss_pred CCCCCceEEECCcccCCCCHHHHhcccEEEccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCcccc
Q 000789 427 YDPDAGEVLIDGIDIKKLQLKWIREKIGLVSQEPILFATSLRENIAYGKENATDQEIRTAIELANAAKFIDKLPKGLDTM 506 (1283)
Q Consensus 427 ~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~ 506 (1283)
++|++|+|.++| +|+||+|+||+|++||+|||.||.+ .+++++.++++.+++++++..+|+|++|.
T Consensus 476 ~~~~~G~i~~~g-------------~iayv~Q~~~l~~~Ti~eNI~~g~~-~~~~~~~~~~~~~~L~~~l~~l~~g~~t~ 541 (1490)
T TIGR01271 476 LEPSEGKIKHSG-------------RISFSPQTSWIMPGTIKDNIIFGLS-YDEYRYTSVIKACQLEEDIALFPEKDKTV 541 (1490)
T ss_pred CCCCCceEEECC-------------EEEEEeCCCccCCccHHHHHHhccc-cchHHHHHHHHHHhHHHHHHhcccccccc
Confidence 999999999998 5999999999999999999999875 45566778888889999999999999999
Q ss_pred ccCCCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHH-HHHHHcCCCeEEEEecCchhhhccCEEEEEe
Q 000789 507 AGEHGTQLSGGQKQRIAIARAILKNPKILLLDEATSALDAESERIVQD-ALVKIMTSRTTVVVAHRLTTIRNADLIAVVH 585 (1283)
Q Consensus 507 ~~~~g~~LSgGqkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~-~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~ 585 (1283)
+|++|.+|||||||||+||||++++|+|+|||||||+||+++++.+.+ .+.++.+++|+|+|||+++.+..||+|++|+
T Consensus 542 vg~~g~~LSgGqkqRi~lARAl~~~~~illLDep~saLD~~~~~~i~~~~l~~~~~~~tvilvtH~~~~~~~ad~ii~l~ 621 (1490)
T TIGR01271 542 LGEGGITLSGGQRARISLARAVYKDADLYLLDSPFTHLDVVTEKEIFESCLCKLMSNKTRILVTSKLEHLKKADKILLLH 621 (1490)
T ss_pred ccCcCCCcCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCeEEEEeCChHHHHhCCEEEEEE
Confidence 999999999999999999999999999999999999999999999987 4677778899999999999999999999999
Q ss_pred CCEEeEecChhHHhcCCCChhHHHHHHhhc------Cch---hhhh------h--------hcccccc-Cchhhhh----
Q 000789 586 QGKIVEKGTHDELIKDPEGPYTQLVRLQEG------SKE---AEDA------L--------ATDADKL-DSSFDIL---- 637 (1283)
Q Consensus 586 ~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~------~~~---~~~~------~--------~~~~~~~-~~~~~~~---- 637 (1283)
+|+|++.|+++++... ++.|.+.+..... ... ..+. . ++..... ..+....
T Consensus 622 ~g~i~~~g~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 700 (1490)
T TIGR01271 622 EGVCYFYGTFSELQAK-RPDFSSLLLGLEAFDNFSAERRNSILTETLRRVSIDGDSTVFSGPETIKQSFKQPPPEFAEKR 700 (1490)
T ss_pred CCEEEEEcCHHHHHhc-ChHHHHHHhcccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 9999999999999875 5566665531100 000 0000 0 0000000 0000000
Q ss_pred ------hhh-hcCC---------C---CCCc-cccccc---------------cccCCC----------CCCcc-----c
Q 000789 638 ------DKA-MTRS---------G---SRGE-SMRRSI---------------SRHSSG----------SRHSF-----G 667 (1283)
Q Consensus 638 ------~~~-~~~~---------~---~~~~-~~~~~~---------------~~~~~~----------~~~~~-----~ 667 (1283)
+.. ..+. . .... ...+.. ...... ..... .
T Consensus 701 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 780 (1490)
T TIGR01271 701 KQSIILNPIASARKFSFVQMGPQKAQATTIEDAVREPSERKFSLVPEDEQGEESLPRGNQYHHGLQHQAQRRQSVLQLMT 780 (1490)
T ss_pred cccccccccccccccccccccccccccccccchhcccccccccccccccccccccccccccccccccccccccchhhccc
Confidence 000 0000 0 0000 000000 000000 00000 0
Q ss_pred cc-----------------cCCCC-C---CCccc--cc-cCCC----CC---CC-----CchhhHhhhhhHHHHHHHHhh
Q 000789 668 FT-----------------YGVPG-P---INVFE--TE-EGDQ----GG---AE-----RTPLMIEKRQKLSMRRLAYLN 711 (1283)
Q Consensus 668 ~~-----------------~~~~~-~---~~~~~--~~-~~~~----~~---~~-----~~~~~~~~~~~~~~~~~~~~~ 711 (1283)
.. ..... . ..... .. ..+. .. .. ...++....+.+.++.+.+|.
T Consensus 781 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~vY~~Y~ 860 (1490)
T TIGR01271 781 HSNRGENRREQLQTSFRKKSSITQQNELASELDIYSRRLSKDSVYEISEEINEEDLKECFADERENVFETTTWNTYLRYI 860 (1490)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhhHHHHhhcCcccHHHHHHHH
Confidence 00 00000 0 00000 00 0000 00 00 000011122334444444444
Q ss_pred cCh--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCch------h-h-------------hhhhHHH-HHHHHHHH
Q 000789 712 KPE--FPVLLIGSIAAGIHGVIFPIFGLLLSSSIRMFFEPED------K-L-------------RKDSRFW-ALIYLVLG 768 (1283)
Q Consensus 712 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~-~-------------~~~~~~~-~~~~~~l~ 768 (1283)
+.. +..+.+.+++.++..++.. +..++...|.... . . .....+| ..+|++++
T Consensus 861 ~~~g~~~~~~~~~~~~~~~~~~~~-----~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 935 (1490)
T TIGR01271 861 TTNRNLVFVLIFCLVIFLAEVAAS-----LLGLWLITDNPSAPNYVDQQHANASSPDVQKPVIITPTSAYYIFYIYVGTA 935 (1490)
T ss_pred HhcCcHHHHHHHHHHHHHHHHHHH-----HhhHHHHhcccccccccccccccCCCccccccccccCcchhhHHHHHHHHH
Confidence 322 1221111111111111111 1122222222100 0 0 0011223 44455555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHH
Q 000789 769 IINLIAVPFQNYFFGVAGGKLIRRIRSLTFEKVVHQEISWFDDPANSSGSVGARLSTDASTIRSLVGDSLALVVQNIATI 848 (1283)
Q Consensus 769 ~~~~l~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~ff~~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~ 848 (1283)
++..++.+++.+++...+.+++.++|.+++++++++|++||++ +++|+++||+++|++.+++.++..+..++..++.+
T Consensus 936 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~--~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~ 1013 (1490)
T TIGR01271 936 DSVLALGFFRGLPLVHTLLTVSKRLHEQMLHSVLQAPMAVLNT--MKAGRILNRFTKDMAIIDDMLPLTLFDFIQLTLIV 1013 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCC--CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5566677788888999999999999999999999999999995 89999999999999999999999999999999988
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH----HHHHHHHHHHHHHHhhhHHHHHhccHHHHHHH
Q 000789 849 AAGLIIAFTANWILAFVILAVSPLMLVQGYTQTKFMKGFSADAK----LMYEEASQVANDAVGSIRTVASFCSEEKVMDL 924 (1283)
Q Consensus 849 ~~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~ 924 (1283)
++.++++++.+|+++++ ++|+.+++.+....+.+ ..++.+ ...+...+++.|++.|+.|||+|+.++.+.++
T Consensus 1014 i~~l~~i~~~~p~l~l~---~~~l~~~~~~~~~~~~~-~~r~l~~~~~~~~s~l~~~~~Etl~Gl~tIraf~~~~~~~~~ 1089 (1490)
T TIGR01271 1014 LGAIFVVSVLQPYIFIA---AIPVAVIFIMLRAYFLR-TSQQLKQLESEARSPIFSHLITSLKGLWTIRAFGRQSYFETL 1089 (1490)
T ss_pred HHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhhHHHHHHHHHhcCHHHHHHhCCcHHHHHH
Confidence 88888888888875443 33333333322322222 233333 34455679999999999999999999999999
Q ss_pred HHHHHhcHHHhHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 925 YEKKCEGPLKNGVRRGILSGAGFGFSFLVLYCTN--AFCFYIGSVLVEHGKATFGQVFKVFFALTISALGVSQTSAMAPD 1002 (1283)
Q Consensus 925 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1002 (1283)
|.+..+...+..........+......++..+.. +++++++. ...+.|.+..++.+......++..+...+.+
T Consensus 1090 ~~~~~~~~~~~~~~~~~~~~wl~~~~~~i~~~~~~~~~~l~~~~-----~~~~~g~~g~~l~~~~~l~~~l~~l~~~~~~ 1164 (1490)
T TIGR01271 1090 FHKALNLHTANWFLYLSTLRWFQMRIDIIFVFFFIAVTFIAIGT-----NQDGEGEVGIILTLAMNILSTLQWAVNSSID 1164 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hcCCccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999887655433322222111111111111111 11112222 1233344444444555566777888888899
Q ss_pred HHHHHHHHHHHHHHhccCCCCCCCCCc---------------CCcc-CCCcccEEEEEEEEECCCCCCcccccceeEEec
Q 000789 1003 TTKAKDSAASIFEILDSKPKIDSSKDE---------------GMTL-SSVGGAIELRCVSFKYPTRPDVQIFRNLCLSIP 1066 (1283)
Q Consensus 1003 ~~~~~~a~~ri~~~~~~~~~~~~~~~~---------------~~~~-~~~~g~I~~~nVsf~Y~~~~~~~vL~~is~~I~ 1066 (1283)
++..+.+++|+.++.+.+++.....+. ..++ .+..|.|+|+||+|+|++. .+++|+||||+|+
T Consensus 1165 le~~~~s~eRi~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~-~~~vL~~is~~I~ 1243 (1490)
T TIGR01271 1165 VDGLMRSVSRVFKFIDLPQEEPRPSGGGGKYQLSTVLVIENPHAQKCWPSGGQMDVQGLTAKYTEA-GRAVLQDLSFSVE 1243 (1490)
T ss_pred HHHHHHHHHHHHHHhcCCCccccccccccccccccccccccCCCCCCCCCCCeEEEEEEEEEeCCC-CcceeeccEEEEc
Confidence 999999999999999776553211100 0011 1245789999999999854 4679999999999
Q ss_pred CCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHhcceEEEccCCCCChhhHHHHHhcCCCCCCCH
Q 000789 1067 SGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMGLVSQEPVLFNETIRTNIAYGKQGGATE 1146 (1283)
Q Consensus 1067 ~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~~~~sd 1146 (1283)
|||+||||||||||||||+++|+|+|+ ++|+|+|||+|+++++++++|++|+||||||+||+|||||||++. .+++|
T Consensus 1244 ~GekvaIvGrSGsGKSTLl~lL~rl~~-~~G~I~IdG~di~~i~~~~lR~~is~IpQdp~LF~GTIR~NLdp~--~~~td 1320 (1490)
T TIGR01271 1244 GGQRVGLLGRTGSGKSTLLSALLRLLS-TEGEIQIDGVSWNSVTLQTWRKAFGVIPQKVFIFSGTFRKNLDPY--EQWSD 1320 (1490)
T ss_pred CCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEcccCCHHHHHhceEEEeCCCccCccCHHHHhCcc--cCCCH
Confidence 999999999999999999999999998 799999999999999999999999999999999999999999875 36899
Q ss_pred HHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHc
Q 000789 1147 EEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVM 1226 (1283)
Q Consensus 1147 ~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~ 1226 (1283)
+++|+||++++++++|.++|+||||+|||+|.+||||||||||||||||++|+|||||||||+||++||+.|+++|++.+
T Consensus 1321 eei~~aL~~~~L~~~i~~lp~GLdt~v~e~G~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~~~~ 1400 (1490)
T TIGR01271 1321 EEIWKVAEEVGLKSVIEQFPDKLDFVLVDGGYVLSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRKTLKQSF 1400 (1490)
T ss_pred HHHHHHHHHCCCHHHHHhCccccccccccCCCcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceEEEEecCchHHhhcCEEEEEeCCEEEEecChHHHHhccCchhHHHHHHhhc
Q 000789 1227 VNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALMKITDGAYASLVALHVS 1281 (1283)
Q Consensus 1227 ~~~TvI~IaHrl~ti~~~D~I~vl~~G~Ive~Gt~~eLl~~~~g~y~~L~~~~~~ 1281 (1283)
++||||+||||++++.+||||+||++|+|+|+|+|++|+++ +|.|++|++.+..
T Consensus 1401 ~~~TvI~IaHRl~ti~~~DrIlvL~~G~ivE~g~p~~Ll~~-~~~f~~l~~~~~~ 1454 (1490)
T TIGR01271 1401 SNCTVILSEHRVEALLECQQFLVIEGSSVKQYDSIQKLLNE-TSLFKQAMSAADR 1454 (1490)
T ss_pred CCCEEEEEecCHHHHHhCCEEEEEECCEEEEeCCHHHHHcC-CcHHHHHHHHhCh
Confidence 99999999999999999999999999999999999999984 9999999987643
No 9
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=4.8e-111 Score=987.17 Aligned_cols=576 Identities=38% Similarity=0.632 Sum_probs=543.1
Q ss_pred hhHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 36 VPFYKLFAFADKQDAVLMIVGTISAIGSGLAHPFMTLIFGHLINSFGSSDRSHVVHEVSKVAVKFLYLAAGTGIAAFLQV 115 (1283)
Q Consensus 36 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (1283)
..+++++.|+++. ++++..+.++.++..+...+.|.++|+++|.+...+. ....+...+..+.++.++.+++++++.
T Consensus 133 ~~~~rl~~l~~~~-~~~l~~a~~~l~vss~~~~~iP~~~G~~id~~~~~~~--~~~~~~~~~~~l~~l~~~~a~~~~~r~ 209 (716)
T KOG0058|consen 133 TLLKRLLGLLKPE-WKWLVAAFVLLLVSSLINMFIPYYLGKLIDTISEGDD--SADALKRACTILLGLFLIGALANAIRG 209 (716)
T ss_pred hHHHHHHHHhchh-HHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhccc--hHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4788999999886 5567888888888888899999999999998765211 123344456667777788899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCccHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Q 000789 116 SCWMVTGERQATRIRGLYLKTILRQDIGFFDTETTTGEVIGRMSGDTILIQEAMGEKVGKFIQLMSTFFGGFVVALARGW 195 (1283)
Q Consensus 116 ~~~~~~~~~~~~~lR~~~~~~ll~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 195 (1283)
+++.+.++++..++|.++|+++++++++|||.+ ++||++||++.|+..+.+.++..+...+.++++.++++++|++++|
T Consensus 210 ~~~~~a~~rv~~rlR~~lF~sil~QdiaFFD~n-ktGeL~SRLtsD~~~vs~svs~nls~~lR~~~~~~g~~~~M~~~S~ 288 (716)
T KOG0058|consen 210 GLLQYAGERVVARLRTDLFRSLLRQDIAFFDEN-KTGELISRLTSDTQIVSNSVSQNLSDGLRNLVQGFGGLGFMFSLSW 288 (716)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccC-CccHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhhhhH
Confidence 999999999999999999999999999999987 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 196 FLALVLLACLPAIVIAGGSMALIMSKMSSRGQIAYSEAGTVVEQTVSGIRTVSSFTGEKQAIEKYNNKLQVAYRAAVQQG 275 (1283)
Q Consensus 196 ~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~ 275 (1283)
+|+++.++.+|+++++..+++++.++..++.|++.++++.+.+|.+++|||||+|+.|+.+.+||.+..++..+...|..
T Consensus 289 ~Ltlv~~i~~P~v~~~~~~yG~~~rklS~~~Q~a~A~a~~vaeE~ls~~rTVRsfa~E~~E~~ry~~~l~~~~~i~~k~a 368 (716)
T KOG0058|consen 289 RLTLVTLIVVPIVALVAKIYGKYLRKLSKQTQDALARANQVAEEVLSAMRTVRSFAAEEQEVKRYNKKLREVLKLSKKEA 368 (716)
T ss_pred HHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Q 000789 276 MVSGIGLGVLMLTVIGTYGLAVWYGSKLIIEKGYNGGTVINVIMAIMTGGMSLGQTSPCLNAFAGGQAAAYKMFETIKRK 355 (1283)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~t~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~ 355 (1283)
...+.+.....+...+..+.++++|++++..|.+|.|.+.+|++|......++..+...++.++++..|.+|+|+++|.+
T Consensus 369 ~a~~~f~~~~~~~~~~~~~siL~~Gg~Lv~~g~mt~g~L~sFllY~~~~g~sl~~ls~~ys~lmkgvGAs~rvFel~dr~ 448 (716)
T KOG0058|consen 369 VAYGIFFGSTNLLGNLAVLSILFYGGHLVLTGSLTSGALSSFLLYQVQLGSSLSGLSSFYSELMKGVGASERVFELMDRK 448 (716)
T ss_pred HHhhHhHhHHHHHHhHHHHHHHHhccchhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHhccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCcccCccccEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEE
Q 000789 356 PKIDPYDTSGITLEKIEGEIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVL 435 (1283)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~ 435 (1283)
|..+... ...|...+|.|+|+||+|+||.+++.++|+|+||+|+|||+||+||||||||||+++||.+||+|++|+|+
T Consensus 449 P~i~~~G--~~~p~~~~G~IeF~~VsFaYP~Rp~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~PtsG~Il 526 (716)
T KOG0058|consen 449 PRIPLTG--TLAPDHLQGVIEFEDVSFAYPTRPDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPTSGRIL 526 (716)
T ss_pred CCCCCCC--ccccccccceEEEEEeeeecCCCCCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCCCeEE
Confidence 9886542 22333678999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ECCcccCCCCHHHHhcccEEEccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCC
Q 000789 436 IDGIDIKKLQLKWIREKIGLVSQEPILFATSLRENIAYGKENATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLS 515 (1283)
Q Consensus 436 ~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LS 515 (1283)
+||+||+++++.+||++||+|.|||.||++||+|||+||.+++++|++.+|+++|++|+||.++|+||||.|||+|.+||
T Consensus 527 lDG~~i~~~~~~~lr~~Ig~V~QEPvLFs~sI~eNI~YG~~~~t~e~i~~AAk~ANah~FI~~~p~gY~T~VGEkG~qLS 606 (716)
T KOG0058|consen 527 LDGVPISDINHKYLRRKIGLVGQEPVLFSGSIRENIAYGLDNATDEEIEAAAKMANAHEFITNFPDGYNTVVGEKGSQLS 606 (716)
T ss_pred ECCeehhhcCHHHHHHHeeeeeccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCcccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhccCEEEEEeCCEEeEecCh
Q 000789 516 GGQKQRIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMTSRTTVVVAHRLTTIRNADLIAVVHQGKIVEKGTH 595 (1283)
Q Consensus 516 gGqkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~ 595 (1283)
|||||||||||||++||.||||||+|||||+++|..++++|.++++++|||+|+|||+|+++||+|+|+++|+|+|.|+|
T Consensus 607 GGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~~rTVlvIAHRLSTV~~Ad~Ivvi~~G~V~E~G~h 686 (716)
T KOG0058|consen 607 GGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQGRTVLVIAHRLSTVRHADQIVVIDKGRVVEMGTH 686 (716)
T ss_pred chHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhcCCeEEEEehhhhHhhhccEEEEEcCCeEEecccH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHhcCCCChhHHHHHHhhcCc
Q 000789 596 DELIKDPEGPYTQLVRLQEGSK 617 (1283)
Q Consensus 596 ~~l~~~~~~~~~~~~~~~~~~~ 617 (1283)
+||+++++|.|+++.+.|....
T Consensus 687 ~eLl~~~~gly~~Lv~~q~~~~ 708 (716)
T KOG0058|consen 687 DELLSKPNGLYAKLVQRQLDSG 708 (716)
T ss_pred HHHhhCcccHHHHHHHHhcccC
Confidence 9999997799999998876543
No 10
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.9e-109 Score=973.60 Aligned_cols=573 Identities=38% Similarity=0.597 Sum_probs=541.5
Q ss_pred HHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 702 LSMRRLAYLNKPEFPVLLIGSIAAGIHGVIFPIFGLLLSSSIRMFFEPEDKLRKDSRFWALIYLVLGIINLIAVPFQNYF 781 (1283)
Q Consensus 702 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~ 781 (1283)
..+++++.+.+|.|+++..+.++..+......+.+.+.+++++.++.. ++......-...++.++.++..++.+++.++
T Consensus 133 ~~~~rl~~l~~~~~~~l~~a~~~l~vss~~~~~iP~~~G~~id~~~~~-~~~~~~~~~~~~~l~~l~~~~a~~~~~r~~~ 211 (716)
T KOG0058|consen 133 TLLKRLLGLLKPEWKWLVAAFVLLLVSSLINMFIPYYLGKLIDTISEG-DDSADALKRACTILLGLFLIGALANAIRGGL 211 (716)
T ss_pred hHHHHHHHHhchhHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhc-cchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 467889999999999999999998888888888888888888877651 2212223334566667778888999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Q 000789 782 FGVAGGKLIRRIRSLTFEKVVHQEISWFDDPANSSGSVGARLSTDASTIRSLVGDSLALVVQNIATIAAGLIIAFTANWI 861 (1283)
Q Consensus 782 ~~~~~~~~~~~lr~~~~~~ll~~~~~ff~~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 861 (1283)
+..+++++..++|..+|+++++++++|||+ |.+|++++|++.|...+.+.++..+...+.+++..++++.+|+..+|.
T Consensus 212 ~~~a~~rv~~rlR~~lF~sil~QdiaFFD~--nktGeL~SRLtsD~~~vs~svs~nls~~lR~~~~~~g~~~~M~~~S~~ 289 (716)
T KOG0058|consen 212 LQYAGERVVARLRTDLFRSLLRQDIAFFDE--NKTGELISRLTSDTQIVSNSVSQNLSDGLRNLVQGFGGLGFMFSLSWR 289 (716)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhcc--CCccHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhhhhHH
Confidence 999999999999999999999999999995 889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHhcHHHhHHHHHH
Q 000789 862 LAFVILAVSPLMLVQGYTQTKFMKGFSADAKLMYEEASQVANDAVGSIRTVASFCSEEKVMDLYEKKCEGPLKNGVRRGI 941 (1283)
Q Consensus 862 l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~ 941 (1283)
|+++.++.+|++++...++.+++++.+++.++..+++++...|.+.+++|||+|+.|+...++|.+..++..+...|...
T Consensus 290 Ltlv~~i~~P~v~~~~~~yG~~~rklS~~~Q~a~A~a~~vaeE~ls~~rTVRsfa~E~~E~~ry~~~l~~~~~i~~k~a~ 369 (716)
T KOG0058|consen 290 LTLVTLIVVPIVALVAKIYGKYLRKLSKQTQDALARANQVAEEVLSAMRTVRSFAAEEQEVKRYNKKLREVLKLSKKEAV 369 (716)
T ss_pred HHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC
Q 000789 942 LSGAGFGFSFLVLYCTNAFCFYIGSVLVEHGKATFGQVFKVFFALTISALGVSQTSAMAPDTTKAKDSAASIFEILDSKP 1021 (1283)
Q Consensus 942 ~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~ 1021 (1283)
..+.+++...++.++....+++||++++..|.++.|++.+++++......++..++..+.++.++..|.+|++++++++|
T Consensus 370 a~~~f~~~~~~~~~~~~~siL~~Gg~Lv~~g~mt~g~L~sFllY~~~~g~sl~~ls~~ys~lmkgvGAs~rvFel~dr~P 449 (716)
T KOG0058|consen 370 AYGIFFGSTNLLGNLAVLSILFYGGHLVLTGSLTSGALSSFLLYQVQLGSSLSGLSSFYSELMKGVGASERVFELMDRKP 449 (716)
T ss_pred HhhHhHhHHHHHHhHHHHHHHHhccchhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHhccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcCCccC-CCcccEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEE
Q 000789 1022 KIDSSKDEGMTLS-SVGGAIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVL 1100 (1283)
Q Consensus 1022 ~~~~~~~~~~~~~-~~~g~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~ 1100 (1283)
..+.. +...| ...|.|+|+||+|+||.+|+.+||+|+||+|+|||+||+||||||||||+++||+|||+|++|+|+
T Consensus 450 ~i~~~---G~~~p~~~~G~IeF~~VsFaYP~Rp~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~PtsG~Il 526 (716)
T KOG0058|consen 450 RIPLT---GTLAPDHLQGVIEFEDVSFAYPTRPDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPTSGRIL 526 (716)
T ss_pred CCCCC---CccccccccceEEEEEeeeecCCCCCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCCCeEE
Confidence 87654 22222 578999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ECCccCCCCChHHHhcceEEEccCCCCChhhHHHHHhcCCCCCCCHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCC
Q 000789 1101 LDNIELPKFKLSWLRQQMGLVSQEPVLFNETIRTNIAYGKQGGATEEEIIAATEASNAHNFISALPHGYETNVGERGVQL 1180 (1283)
Q Consensus 1101 idG~di~~~~~~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~L 1180 (1283)
+||+||++++..+||++||+|.|||.||++||+|||.||.+ +++||||.+|+++|++||||.++|+||||.|||+|.+|
T Consensus 527 lDG~~i~~~~~~~lr~~Ig~V~QEPvLFs~sI~eNI~YG~~-~~t~e~i~~AAk~ANah~FI~~~p~gY~T~VGEkG~qL 605 (716)
T KOG0058|consen 527 LDGVPISDINHKYLRRKIGLVGQEPVLFSGSIRENIAYGLD-NATDEEIEAAAKMANAHEFITNFPDGYNTVVGEKGSQL 605 (716)
T ss_pred ECCeehhhcCHHHHHHHeeeeeccceeecccHHHHHhcCCC-CCCHHHHHHHHHHhChHHHHHhCccccccccCCccccc
Confidence 99999999999999999999999999999999999999955 89999999999999999999999999999999999999
Q ss_pred ChhHHHHHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcCCceEEEEecCchHHhhcCEEEEEeCCEEEEecC
Q 000789 1181 SGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGS 1260 (1283)
Q Consensus 1181 SgGQrQRlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~~D~I~vl~~G~Ive~Gt 1260 (1283)
||||||||||||||+|||+||||||||||||+++|..||++|.+..+++|||+|||||+||++||+|+|+++|+|+|.|+
T Consensus 606 SGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~~rTVlvIAHRLSTV~~Ad~Ivvi~~G~V~E~G~ 685 (716)
T KOG0058|consen 606 SGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQGRTVLVIAHRLSTVRHADQIVVIDKGRVVEMGT 685 (716)
T ss_pred cchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhcCCeEEEEehhhhHhhhccEEEEEcCCeEEeccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHhccCchhHHHHHHhhc
Q 000789 1261 HDALMKITDGAYASLVALHVS 1281 (1283)
Q Consensus 1261 ~~eLl~~~~g~y~~L~~~~~~ 1281 (1283)
|+||+++++|.|++|+++|..
T Consensus 686 h~eLl~~~~gly~~Lv~~q~~ 706 (716)
T KOG0058|consen 686 HDELLSKPNGLYAKLVQRQLD 706 (716)
T ss_pred HHHHhhCcccHHHHHHHHhcc
Confidence 999999977999999999864
No 11
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.5e-102 Score=964.32 Aligned_cols=579 Identities=45% Similarity=0.758 Sum_probs=547.4
Q ss_pred cchhHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 34 QKVPFYKLFAFADKQDAVLMIVGTISAIGSGLAHPFMTLIFGHLINSFGSSDRSHVVHEVSKVAVKFLYLAAGTGIAAFL 113 (1283)
Q Consensus 34 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (1283)
.+.++++++++.+| .|.+++++++++++.++..|++.+++++++..+...+.+........++++++++++..++..++
T Consensus 648 ~~~s~~~i~k~~~p-e~~~l~lG~i~a~i~G~~~P~fa~~~s~~~~~f~~~~~~~~~~~~~~~al~f~~l~~~~~i~~~~ 726 (1228)
T KOG0055|consen 648 EKVSFWRIFKLNKP-EWPYLLLGSLGAAIRGATYPLFAYVFSQVLEAFYPPDDDELKREVRAWALIFLGLGIVSGITNFL 726 (1228)
T ss_pred ccccHHHHHHhccc-hhHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56789999999988 57788999999999999999999999999998865443333333334678888889999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCccHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 114 QVSCWMVTGERQATRIRGLYLKTILRQDIGFFDTETTTGEVIGRMSGDTILIQEAMGEKVGKFIQLMSTFFGGFVVALAR 193 (1283)
Q Consensus 114 ~~~~~~~~~~~~~~~lR~~~~~~ll~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 193 (1283)
+.+++...++++..|+|...|+++++++.+|||...++|.|.+|+.+|...++..+.+.+..+++++..++.++++.|++
T Consensus 727 q~~~f~~~ge~Lt~R~R~~~F~~ll~qd~~wFD~~~nsg~l~~RLa~Da~~vr~~v~~rl~~vv~~~~~~~~~iiiaf~~ 806 (1228)
T KOG0055|consen 727 QHYFFGIAGEKLTKRLRSMMFRALLRQEVGWFDDPENSGALSSRLATDASNVRAAVGDRLSLVVQNIAAVIIGIIIAFIY 806 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCccchHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999986666999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHHHHHHHH
Q 000789 194 GWFLALVLLACLPAIVIAGGSMALIMSKMSSRGQIAYSEAGTVVEQTVSGIRTVSSFTGEKQAIEKYNNKLQVAYRAAVQ 273 (1283)
Q Consensus 194 ~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~ 273 (1283)
+|+|+++++++.|++++......+.+.....+..+...+.+....|.+++||||++|+.|+++.+.|.+..+...+...+
T Consensus 807 ~W~lalv~la~~Pll~~~~~~~~~~~~~~~~~~~~~~~ea~~iA~eai~NIrTV~al~~e~~~~~~y~~~l~~p~~~~~~ 886 (1228)
T KOG0055|consen 807 GWRLALVVLATFPLLILSGYLQKKFLKGFSKDDKKAYEEASKIAIEAVSNIRTVAALCAEEKFMELYKEELEKPRKSSFK 886 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 000789 274 QGMVSGIGLGVLMLTVIGTYGLAVWYGSKLIIEKGYNGGTVINVIMAIMTGGMSLGQTSPCLNAFAGGQAAAYKMFETIK 353 (1283)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~t~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~ 353 (1283)
.+.+.++.+++.+.+.++.+++.+|+|++++.+|.+++.+++-.++.+.+....+++.....+.+.+|..|+.+++++++
T Consensus 887 ~~~i~gl~f~~sqs~~~~~~A~~f~~G~~Li~~g~~~~~~~~~vf~~l~~ta~~~~~~~s~~Pd~~ka~~Aa~~iF~i~d 966 (1228)
T KOG0055|consen 887 RGLISGLGFGFSQSLLFFVYALSFWYGARLISNGEMTFEDVFRVFMALSFTAMALGQASSYAPDISKAKIAAGSIFEILD 966 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999988888888899999999999999999999999999
Q ss_pred cCCCCCCCCCCCCcccCccccEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCce
Q 000789 354 RKPKIDPYDTSGITLEKIEGEIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGE 433 (1283)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~ 433 (1283)
++|++++..+.+...+..+|+|+|+||+|+||.+|+.++|+|+||+|++|+++||||||||||||++.||.|+|+|++|.
T Consensus 967 r~~~i~~~~~~~~~~~~~~G~I~~~~V~F~YPsRP~~~Il~~l~l~i~~GqTvALVG~SGsGKSTvI~LLeRfYdp~~G~ 1046 (1228)
T KOG0055|consen 967 RKPTIDPDSTSGGKLPNVKGDIEFRNVSFAYPTRPDVPVLNNLSLSIRAGQTVALVGPSGSGKSTVISLLERFYDPDAGK 1046 (1228)
T ss_pred CCCCCCCCCCCCCccccceeEEEEeeeEeeCCCCCCchhhcCCcEEecCCCEEEEECCCCCCHHHHHHHHHHhcCCCCCe
Confidence 99987765433444567889999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEECCcccCCCCHHHHhcccEEEccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCC
Q 000789 434 VLIDGIDIKKLQLKWIREKIGLVSQEPILFATSLRENIAYGKENATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQ 513 (1283)
Q Consensus 434 i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~ 513 (1283)
|.|||+|++++++++||++||.|.|||.||++||||||+||.+.++++|+.+||+.+++|+||.+||+||||.+||+|.+
T Consensus 1047 V~IDg~dik~lnl~~LR~~i~lVsQEP~LF~~TIrENI~YG~~~vs~~eIi~Aak~ANaH~FI~sLP~GyDT~vGerG~Q 1126 (1228)
T KOG0055|consen 1047 VKIDGVDIKDLNLKWLRKQIGLVSQEPVLFNGTIRENIAYGSEEVSEEEIIEAAKLANAHNFISSLPQGYDTRVGERGVQ 1126 (1228)
T ss_pred EEECCcccccCCHHHHHHhcceeccCchhhcccHHHHHhccCCCCCHHHHHHHHHHhhhHHHHhcCcCcccCccCcccCc
Confidence 99999999999999999999999999999999999999999666899999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhccCEEEEEeCCEEeEec
Q 000789 514 LSGGQKQRIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMTSRTTVVVAHRLTTIRNADLIAVVHQGKIVEKG 593 (1283)
Q Consensus 514 LSgGqkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g 593 (1283)
||||||||||||||+++||+||||||+|||||.++|+.+|++|++.+.+||+|+|||||+++++||.|+|+++|+|+|+|
T Consensus 1127 LSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a~~gRT~IvIAHRLSTIqnaD~I~Vi~~G~VvE~G 1206 (1228)
T KOG0055|consen 1127 LSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRAMEGRTTIVIAHRLSTIQNADVIAVLKNGKVVEQG 1206 (1228)
T ss_pred CCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHhhcCCcEEEEecchhhhhcCCEEEEEECCEEEecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhHHhcCCCChhHHHHHHhh
Q 000789 594 THDELIKDPEGPYTQLVRLQE 614 (1283)
Q Consensus 594 ~~~~l~~~~~~~~~~~~~~~~ 614 (1283)
||++|++. +|.|.+|++.|.
T Consensus 1207 tH~~L~~~-~G~Y~~Lv~~q~ 1226 (1228)
T KOG0055|consen 1207 THDELLAK-RGIYFRLVQLQS 1226 (1228)
T ss_pred cHHHHHhC-CCchHHHhhhcc
Confidence 99999995 999999998764
No 12
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=3.3e-93 Score=876.97 Aligned_cols=570 Identities=31% Similarity=0.482 Sum_probs=523.6
Q ss_pred chhHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 35 KVPFYKLFAFADKQDAVLMIVGTISAIGSGLAHPFMTLIFGHLINSFGSSDRSHVVHEVSKVAVKFLYLAAGTGIAAFLQ 114 (1283)
Q Consensus 35 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (1283)
+..+.+++....+++. .+.-.++.+++..+.....|++.+.++|.+..... ...+....+.++++++...++.+++
T Consensus 139 ~~~~~~f~~~~~~~~~-~l~~v~~~sl~l~i~~l~~p~~~q~viD~Vl~~~~---~~tL~vl~ig~~~~~l~~~~l~~lr 214 (709)
T COG2274 139 PFGLSWFIPLLFKYRR-LLFEVLLASLLLQLLALATPLFSQIVIDKVLPDAS---RSTLTVLAIGLLLAALFEALLRLLR 214 (709)
T ss_pred ccchHhHHHHHHhhHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCc---hhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4456666666666543 33444555555666666677788999998765432 2334455666677778888999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCccHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000789 115 VSCWMVTGERQATRIRGLYLKTILRQDIGFFDTETTTGEVIGRMSGDTILIQEAMGEKVGKFIQLMSTFFGGFVVALARG 194 (1283)
Q Consensus 115 ~~~~~~~~~~~~~~lR~~~~~~ll~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 194 (1283)
.+...+.+.|+..++-.++|+|++++|++||+++ ++||+++|+. |.+.|+++++..+...+.++.++++.+++|++++
T Consensus 215 ~~~~~~~~~rld~~l~~~~~~hll~Lpl~~f~~r-~~Ge~~sR~~-el~~Ir~flt~~~l~~iiD~~~~~i~l~vm~~ys 292 (709)
T COG2274 215 TYLIAHLGKRLDLELSGRFFRHLLRLPLSYFEKR-SVGEIISRVR-ELEQIREFLTGSILTLIIDLLFALIFLAVMFLYS 292 (709)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHcCcHHHccCC-ChhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999987 9999999997 9999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHHHHHHHHH
Q 000789 195 WFLALVLLACLPAIVIAGGSMALIMSKMSSRGQIAYSEAGTVVEQTVSGIRTVSSFTGEKQAIEKYNNKLQVAYRAAVQQ 274 (1283)
Q Consensus 195 ~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~ 274 (1283)
|.|++++++.+|+++++..++.+.+++..++..+..++.++.+.|+++|+++||+.+.|..+..+|++...+..+.+.+.
T Consensus 293 ~~L~li~l~~~~l~~l~~~~~~~~l~~~~~~~~~~~a~~~s~lvE~i~gi~tvK~~~~e~~~~~~w~~~~~~~~~~~~~~ 372 (709)
T COG2274 293 WKLTLIVLAAIPLNVLITLIFQPLLRRKTRKLIEESAEQQSFLVETIKGIETVKALAAEPRFRSQWDNRLAKQVNIGFKT 372 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHhhhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Q 000789 275 GMVSGIGLGVLMLTVIGTYGLAVWYGSKLIIEKGYNGGTVINVIMAIMTGGMSLGQTSPCLNAFAGGQAAAYKMFETIKR 354 (1283)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~t~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~ 354 (1283)
.........+..++..++.++++|+|+++|.+|.+|.|.+++|.+.......|+.++...+..++++..+.+|+.++++.
T Consensus 373 ~~~~~~~~~~~~~l~~l~~v~iL~~G~~lVl~~~lTlG~LiAf~~l~~~f~~pi~~L~~~~~~~q~~~~~~~rL~dil~~ 452 (709)
T COG2274 373 EKLALILNTIKSLLQQLSSVLILWFGAILVLEGELTLGQLVAFNMLAGYFISPITRLSQLWTDFQQAKVALERLGDILDT 452 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCcccCccccEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceE
Q 000789 355 KPKIDPYDTSGITLEKIEGEIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEV 434 (1283)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i 434 (1283)
++|.+... .....++..|+|+|+||+|+|+.++ .++|+|+||+|+|||++||||+||||||||+|+|+|+|+|++|+|
T Consensus 453 ~~E~~~~~-~~~~~~~~~g~I~~~nvsf~y~~~~-~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~~G~I 530 (709)
T COG2274 453 PPEQEGDK-TLIHLPKLQGEIEFENVSFRYGPDD-PPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQQGRI 530 (709)
T ss_pred Cccccccc-ccccccccCceEEEEEEEEEeCCCC-cchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceE
Confidence 88754432 1234566789999999999998653 479999999999999999999999999999999999999999999
Q ss_pred EECCcccCCCCHHHHhcccEEEccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCC
Q 000789 435 LIDGIDIKKLQLKWIREKIGLVSQEPILFATSLRENIAYGKENATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQL 514 (1283)
Q Consensus 435 ~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~L 514 (1283)
++||.|+.++++.++|++||||+||+.||+|||+|||+++.|++++|++.+||+.+++|+||.++|.||+|.+||+|.+|
T Consensus 531 ~~dg~dl~~i~~~~lR~~ig~V~Q~~~Lf~gSI~eNi~l~~p~~~~e~i~~A~~~ag~~~fI~~lP~gy~t~v~E~G~~L 610 (709)
T COG2274 531 LLDGVDLNDIDLASLRRQVGYVLQDPFLFSGSIRENIALGNPEATDEEIIEAAQLAGAHEFIENLPMGYDTPVGEGGANL 610 (709)
T ss_pred EECCEeHHhcCHHHHHhheeEEcccchhhcCcHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhccCEEEEEeCCEEeEecC
Q 000789 515 SGGQKQRIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMTSRTTVVVAHRLTTIRNADLIAVVHQGKIVEKGT 594 (1283)
Q Consensus 515 SgGqkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~ 594 (1283)
||||||||+|||||++||+||||||||||||+++|+.|.+.|.++..++|+|+||||++++++||||+||++|+|+++|+
T Consensus 611 SGGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~~~~T~I~IaHRl~ti~~adrIiVl~~Gkiv~~gs 690 (709)
T COG2274 611 SGGQRQRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQILQGRTVIIIAHRLSTIRSADRIIVLDQGKIVEQGS 690 (709)
T ss_pred CHHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHhcCCeEEEEEccchHhhhccEEEEccCCceeccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHhcCCCChhHHHHHHh
Q 000789 595 HDELIKDPEGPYTQLVRLQ 613 (1283)
Q Consensus 595 ~~~l~~~~~~~~~~~~~~~ 613 (1283)
|+||++. +|.|.++++.|
T Consensus 691 ~~ell~~-~g~y~~l~~~q 708 (709)
T COG2274 691 HEELLAQ-GGLYARLYQQQ 708 (709)
T ss_pred HHHHHHh-cChHHHHHhcc
Confidence 9999998 99999998755
No 13
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=8.8e-93 Score=873.20 Aligned_cols=551 Identities=32% Similarity=0.518 Sum_probs=504.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 718 LLIGSIAAGIHGVIFPIFGLLLSSSIRMFFEPEDKLRKDSRFWALIYLVLGIINLIAVPFQNYFFGVAGGKLIRRIRSLT 797 (1283)
Q Consensus 718 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~lr~~~ 797 (1283)
+++..++..+.+++.|++..++.+ ... ++............+++++++..++.+++.+++...+.++...+-..+
T Consensus 159 v~~~sl~l~i~~l~~p~~~q~viD---~Vl--~~~~~~tL~vl~ig~~~~~l~~~~l~~lr~~~~~~~~~rld~~l~~~~ 233 (709)
T COG2274 159 VLLASLLLQLLALATPLFSQIVID---KVL--PDASRSTLTVLAIGLLLAALFEALLRLLRTYLIAHLGKRLDLELSGRF 233 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH---hhh--ccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 344444445555555555444332 221 112222333445566677888899999999999999999999999999
Q ss_pred HHHHHcCCccccccCCCChhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Q 000789 798 FEKVVHQEISWFDDPANSSGSVGARLSTDASTIRSLVGDSLALVVQNIATIAAGLIIAFTANWILAFVILAVSPLMLVQG 877 (1283)
Q Consensus 798 ~~~ll~~~~~ff~~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~l~~~pl~~~~~ 877 (1283)
|+|++++|++||.+ +++|++++|+ +|.+.++++++.....++.+++..++.++++++++|++++++++.+|++++..
T Consensus 234 ~~hll~Lpl~~f~~--r~~Ge~~sR~-~el~~Ir~flt~~~l~~iiD~~~~~i~l~vm~~ys~~L~li~l~~~~l~~l~~ 310 (709)
T COG2274 234 FRHLLRLPLSYFEK--RSVGEIISRV-RELEQIREFLTGSILTLIIDLLFALIFLAVMFLYSWKLTLIVLAAIPLNVLIT 310 (709)
T ss_pred HHHHHcCcHHHccC--CChhhHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999995 8999999998 57999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHhcHHHhHHHHHHHHHHHHHHHHHHHHHH
Q 000789 878 YTQTKFMKGFSADAKLMYEEASQVANDAVGSIRTVASFCSEEKVMDLYEKKCEGPLKNGVRRGILSGAGFGFSFLVLYCT 957 (1283)
Q Consensus 878 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 957 (1283)
++..+++++..++.....++.++.+.|++.|++|||+.+.|.++..+|++.+.+..+..++..........+..++..+.
T Consensus 311 ~~~~~~l~~~~~~~~~~~a~~~s~lvE~i~gi~tvK~~~~e~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 390 (709)
T COG2274 311 LIFQPLLRRKTRKLIEESAEQQSFLVETIKGIETVKALAAEPRFRSQWDNRLAKQVNIGFKTEKLALILNTIKSLLQQLS 390 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCcCCccCCCc
Q 000789 958 NAFCFYIGSVLVEHGKATFGQVFKVFFALTISALGVSQTSAMAPDTTKAKDSAASIFEILDSKPKIDSSKDEGMTLSSVG 1037 (1283)
Q Consensus 958 ~~~~~~~g~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~ 1037 (1283)
.++++|+|.+++..|.+|+|+++++......+..|+..+.+.+.+++....+.+|+.++++.++|.+.... ....+...
T Consensus 391 ~v~iL~~G~~lVl~~~lTlG~LiAf~~l~~~f~~pi~~L~~~~~~~q~~~~~~~rL~dil~~~~E~~~~~~-~~~~~~~~ 469 (709)
T COG2274 391 SVLILWFGAILVLEGELTLGQLVAFNMLAGYFISPITRLSQLWTDFQQAKVALERLGDILDTPPEQEGDKT-LIHLPKLQ 469 (709)
T ss_pred HHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccc-cccccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999887543321 22345577
Q ss_pred ccEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHhcc
Q 000789 1038 GAIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQ 1117 (1283)
Q Consensus 1038 g~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~ 1117 (1283)
|.|+|+||+|+|+.+ ++++|+|+||+|+|||+|||||+||||||||+|+|.|+|+|++|+|++||+|+.++++.++|++
T Consensus 470 g~I~~~nvsf~y~~~-~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~~G~I~~dg~dl~~i~~~~lR~~ 548 (709)
T COG2274 470 GEIEFENVSFRYGPD-DPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQQGRILLDGVDLNDIDLASLRRQ 548 (709)
T ss_pred ceEEEEEEEEEeCCC-CcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEeHHhcCHHHHHhh
Confidence 999999999999866 3579999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEccCCCCChhhHHHHHhcCCCCCCCHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHHHHHccC
Q 000789 1118 MGLVSQEPVLFNETIRTNIAYGKQGGATEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKN 1197 (1283)
Q Consensus 1118 i~~V~Qdp~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiARAll~~ 1197 (1283)
|+|||||+.||+|||||||++++ +++++||+++||+.+++|+||.++|.||||+|||+|.+|||||||||+|||||+++
T Consensus 549 ig~V~Q~~~Lf~gSI~eNi~l~~-p~~~~e~i~~A~~~ag~~~fI~~lP~gy~t~v~E~G~~LSGGQrQrlalARaLl~~ 627 (709)
T COG2274 549 VGYVLQDPFLFSGSIRENIALGN-PEATDEEIIEAAQLAGAHEFIENLPMGYDTPVGEGGANLSGGQRQRLALARALLSK 627 (709)
T ss_pred eeEEcccchhhcCcHHHHHhcCC-CCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCCCCHHHHHHHHHHHHhccC
Confidence 99999999999999999999994 57999999999999999999999999999999999999999999999999999999
Q ss_pred CCEEEEecccCCCCHHHHHHHHHHHHHHcCCceEEEEecCchHHhhcCEEEEEeCCEEEEecChHHHHhccCchhHHHHH
Q 000789 1198 PKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALMKITDGAYASLVA 1277 (1283)
Q Consensus 1198 p~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~~D~I~vl~~G~Ive~Gt~~eLl~~~~g~y~~L~~ 1277 (1283)
|+||||||||||||++||+.|.+.|.+...+||+|+||||++++++||||+||++|+|+|+|+|+||++. +|.|+++++
T Consensus 628 P~ILlLDEaTSaLD~~sE~~I~~~L~~~~~~~T~I~IaHRl~ti~~adrIiVl~~Gkiv~~gs~~ell~~-~g~y~~l~~ 706 (709)
T COG2274 628 PKILLLDEATSALDPETEAIILQNLLQILQGRTVIIIAHRLSTIRSADRIIVLDQGKIVEQGSHEELLAQ-GGLYARLYQ 706 (709)
T ss_pred CCEEEEeCcccccCHhHHHHHHHHHHHHhcCCeEEEEEccchHhhhccEEEEccCCceeccCCHHHHHHh-cChHHHHHh
Confidence 9999999999999999999999999999999999999999999999999999999999999999999997 999999999
Q ss_pred Hhh
Q 000789 1278 LHV 1280 (1283)
Q Consensus 1278 ~~~ 1280 (1283)
+|.
T Consensus 707 ~q~ 709 (709)
T COG2274 707 QQE 709 (709)
T ss_pred ccC
Confidence 873
No 14
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=1e-87 Score=845.37 Aligned_cols=569 Identities=21% Similarity=0.270 Sum_probs=488.7
Q ss_pred hHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 37 PFYKLFAFADKQDAVLMIVGTISAIGSGLAHPFMTLIFGHLINSFGSSDRSHVVHEVSKVAVKFLYLAAGTGIAAFLQVS 116 (1283)
Q Consensus 37 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (1283)
.+++++++.+++++ .+++++++.++..++.+..|++++.++|.+...+.+ ...+..+...++++.++..++.+++.+
T Consensus 9 ~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (588)
T PRK11174 9 LTRWLKQQSKPAKR-WLNLSILLGFLSGLLLIAQAWLLATILQALIIENIP--REALLPPFILLILLFVLRALLAWLRER 85 (588)
T ss_pred hhHHHHHHhHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc--hhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46778888888754 556777888888888889999999999976421111 011222333344455566778888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCccHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Q 000789 117 CWMVTGERQATRIRGLYLKTILRQDIGFFDTETTTGEVIGRMSGDTILIQEAMGEKVGKFIQLMSTFFGGFVVALARGWF 196 (1283)
Q Consensus 117 ~~~~~~~~~~~~lR~~~~~~ll~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 196 (1283)
+..+.+.++..++|.++|+|++++|+++|++. ++|++++|+++|++.+++++...+..++..++.+++.++++++++|.
T Consensus 86 ~~~~~~~~~~~~lr~~~~~~ll~~~~~~~~~~-~~g~l~s~~~~dv~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 164 (588)
T PRK11174 86 VGFKAGQHIRQQIRQQVLDKLQQLGPAWIQGK-PAGSWATLVLEQVEDMHDFYARYLPQMALAVLVPLLILIAVFPINWA 164 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCchhhccC-CHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999976 89999999999999999999999999999988889899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 197 LALVLLACLPAIVIAGGSMALIMSKMSSRGQIAYSEAGTVVEQTVSGIRTVSSFTGEKQAIEKYNNKLQVAYRAAVQQGM 276 (1283)
Q Consensus 197 l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 276 (1283)
+++++++++|+++++...+.++.++..++.++..++.++.+.|.++|+++||+|++|+.+.++|.+..++..+...+..+
T Consensus 165 l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 244 (588)
T PRK11174 165 AGLILLGTAPLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLRGLETLRLFNRGEAETESIRSASEDFRQRTMEVLR 244 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999988888999999999999999999999999999999999999999999999999999998888887777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 277 VSGIGLGVLMLTVIGTYGLAVWYGSKLIIEKGYNGGTV---------INVIMAIMTGGMSLGQTSPCLNAFAGGQAAAYK 347 (1283)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~t~g~~---------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~r 347 (1283)
......++..++..+..+++++++++.+. |.+|.|.+ ++++++......|+..+...+..++++.++++|
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~t~G~l~~~~~~~~~~~~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~r 323 (588)
T PRK11174 245 MAFLSSAVLEFFASISIALVAVYFGFSYL-GELNFGHYGTGVTLFAGFFVLILAPEFYQPLRDLGTFYHAKAQAVGAAES 323 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 76666666655555555444455554443 77777754 112233344567999999999999999999999
Q ss_pred HHHHHccCCCCCCCCCCCCcccCccccEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCC
Q 000789 348 MFETIKRKPKIDPYDTSGITLEKIEGEIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFY 427 (1283)
Q Consensus 348 i~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~ 427 (1283)
+.++++.+++.++.. ....+....+.|+|+||+|.|++ ++++|+|+||+|+||+++|||||||||||||+++|+|+|
T Consensus 324 i~~~l~~~~~~~~~~-~~~~~~~~~~~i~~~~vsf~~~~--~~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~ 400 (588)
T PRK11174 324 LVTFLETPLAHPQQG-EKELASNDPVTIEAEDLEILSPD--GKTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL 400 (588)
T ss_pred HHHHHcCCCcccCCC-ccccCCCCCceEEEEeeEEeccC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC
Confidence 999998765422111 10111112357999999987763 246999999999999999999999999999999999999
Q ss_pred CCCCceEEECCcccCCCCHHHHhcccEEEccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccc
Q 000789 428 DPDAGEVLIDGIDIKKLQLKWIREKIGLVSQEPILFATSLRENIAYGKENATDQEIRTAIELANAAKFIDKLPKGLDTMA 507 (1283)
Q Consensus 428 ~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~ 507 (1283)
|++|+|++||+|+++++.+++|++|+||||+|+||++||+|||++|+|++++++++++|+.+++++|++++|+||||.+
T Consensus 401 -p~~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~LF~~TI~eNI~~g~~~~~~eei~~al~~a~l~~~i~~lp~G~dT~v 479 (588)
T PRK11174 401 -PYQGSLKINGIELRELDPESWRKHLSWVGQNPQLPHGTLRDNVLLGNPDASDEQLQQALENAWVSEFLPLLPQGLDTPI 479 (588)
T ss_pred -CCCcEEEECCEecccCCHHHHHhheEEecCCCcCCCcCHHHHhhcCCCCCCHHHHHHHHHHhCHHHHHHhccccccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhccCEEEEEeCC
Q 000789 508 GEHGTQLSGGQKQRIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMTSRTTVVVAHRLTTIRNADLIAVVHQG 587 (1283)
Q Consensus 508 ~~~g~~LSgGqkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G 587 (1283)
||+|.+|||||||||+|||||++||+|||||||||+||+++|+.|++.|+++.+++|+|+||||+++++.||+|++|++|
T Consensus 480 ge~G~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~~~~TvIiItHrl~~i~~aD~Iivl~~G 559 (588)
T PRK11174 480 GDQAAGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAASRRQTTLMVTHQLEDLAQWDQIWVMQDG 559 (588)
T ss_pred ccCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhCCCEEEEEecChHHHHhCCEEEEEeCC
Confidence 99999999999999999999999999999999999999999999999999998899999999999999999999999999
Q ss_pred EEeEecChhHHhcCCCChhHHHHHHhhc
Q 000789 588 KIVEKGTHDELIKDPEGPYTQLVRLQEG 615 (1283)
Q Consensus 588 ~i~~~g~~~~l~~~~~~~~~~~~~~~~~ 615 (1283)
+|+|+|+|+||+++ ++.|++++..|..
T Consensus 560 ~i~e~G~~~eL~~~-~~~y~~l~~~q~~ 586 (588)
T PRK11174 560 QIVQQGDYAELSQA-GGLFATLLAHRQE 586 (588)
T ss_pred eEeecCCHHHHHhc-chHHHHHHHHhhc
Confidence 99999999999987 7899999977643
No 15
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=1.9e-86 Score=828.94 Aligned_cols=563 Identities=34% Similarity=0.578 Sum_probs=507.0
Q ss_pred hHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 37 PFYKLFAFADKQDAVLMIVGTISAIGSGLAHPFMTLIFGHLINSFGSSDRSHVVHEVSKVAVKFLYLAAGTGIAAFLQVS 116 (1283)
Q Consensus 37 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (1283)
.+++++.+.+ .+ .+.++.++.++..+.....|++++.++|.+.. + .........+++++.++..++.+...+
T Consensus 3 ~~~~l~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~----~~~~~~~~~~~~~~~~~~~v~~~~~~~ 74 (567)
T COG1132 3 LLRRLLKYLK--YK-LLLLAILLLLLSALLSLLLPLLIGRIIDALLA-D----LGELLELLLLLLLLALLGGVLRALQSY 74 (567)
T ss_pred hHHHHHHHHH--HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-h----HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455666555 34 56677777777788888888899999998751 1 122233334444455566777888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCccHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Q 000789 117 CWMVTGERQATRIRGLYLKTILRQDIGFFDTETTTGEVIGRMSGDTILIQEAMGEKVGKFIQLMSTFFGGFVVALARGWF 196 (1283)
Q Consensus 117 ~~~~~~~~~~~~lR~~~~~~ll~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 196 (1283)
+..+.+.++..++|.+++++++++|+++|++. ++|++++|+++|++.++..+......+...+..+++.+++++..+|.
T Consensus 75 ~~~~~~~~~~~~lr~~~~~~l~~~~~~~~~~~-~~g~l~~~~t~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (567)
T COG1132 75 LGSRLGQKIVADLRRDLFEKLLRLPLSFFDKA-KSGDLISRLTNDVEAVSNLVSTVLVLVFTSILLLIGSLVLLFSLSWR 153 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCHHHhCcC-CcchHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 88888899999999999999999999999986 89999999999999999999888666666788888999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 197 LALVLLACLPAIVIAGGSMALIMSKMSSRGQIAYSEAGTVVEQTVSGIRTVSSFTGEKQAIEKYNNKLQVAYRAAVQQGM 276 (1283)
Q Consensus 197 l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 276 (1283)
+++++++..|++.+...++.++.++..++.++..+++++.+.|.++|+++||+|+.++.+.+++.+..+...+...+...
T Consensus 154 l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (567)
T COG1132 154 LALILLLILPLLALVLSLLARKSRKLSRRVREALGELNARLLESLSGIRVIKAFGAEDRELKRFEEANEELRRANLRASR 233 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999888999999999999999999999999999999999999999999999999888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC
Q 000789 277 VSGIGLGVLMLTVIGTYGLAVWYGSKLIIEKGYNGGTVINVIMAIMTGGMSLGQTSPCLNAFAGGQAAAYKMFETIKRKP 356 (1283)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~t~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~ 356 (1283)
..+...++..++..+...+++++|.+++..+.+++|.+++++.+......|+..+...+..++.+..+++|++++++.++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~ri~~~l~~~~ 313 (567)
T COG1132 234 LEALLAPLMLLLSSLGTVLVLALGGFLVLSGSLTVGALAAFILYLLRLLTPILQLGEVVSLLQRASAAAERLFELLDEEP 313 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCc
Confidence 88888888888888999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred CCCCCCCCCCcccCccccEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEE
Q 000789 357 KIDPYDTSGITLEKIEGEIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLI 436 (1283)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~ 436 (1283)
+..+... ......++|+|+||+|+|++ ++++|+|+||+++|||++||||||||||||++++|+|+|+|++|+|++
T Consensus 314 ~~~~~~~---~~~~~~~~I~f~~vsf~y~~--~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~~G~I~i 388 (567)
T COG1132 314 EVEDPPD---PLKDTIGSIEFENVSFSYPG--KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPTSGEILI 388 (567)
T ss_pred cccCCCC---CCCCCCCeEEEEEEEEEcCC--CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEE
Confidence 5433221 12334578999999999974 347999999999999999999999999999999999999999999999
Q ss_pred CCcccCCCCHHHHhcccEEEccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCCh
Q 000789 437 DGIDIKKLQLKWIREKIGLVSQEPILFATSLRENIAYGKENATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSG 516 (1283)
Q Consensus 437 ~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSg 516 (1283)
||+|+++++.+++|++|+||||||+||++||+|||.+|+|+++++++++||+.++++||++++|+||||.+||+|.+|||
T Consensus 389 dg~dI~~i~~~~lr~~I~~V~Qd~~LF~~TI~~NI~~g~~~at~eei~~a~k~a~~~d~I~~lp~g~dt~vge~G~~LSg 468 (567)
T COG1132 389 DGIDIRDISLDSLRKRIGIVSQDPLLFSGTIRENIALGRPDATDEEIEEALKLANAHEFIANLPDGYDTIVGERGVNLSG 468 (567)
T ss_pred CCEehhhcCHHHHHHhccEEcccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCcccccceecCCCccCCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhccCEEEEEeCCEEeEecChh
Q 000789 517 GQKQRIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMTSRTTVVVAHRLTTIRNADLIAVVHQGKIVEKGTHD 596 (1283)
Q Consensus 517 GqkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~~ 596 (1283)
||||||+||||+++||+|||||||||+||++||+.|++++.++.++||+|+||||++++++||+|+||++|+|+|.|+|+
T Consensus 469 GQrQrlaiARall~~~~ILILDEaTSalD~~tE~~I~~~l~~l~~~rT~iiIaHRlsti~~aD~IiVl~~G~i~e~G~h~ 548 (567)
T COG1132 469 GQRQRLAIARALLRNPPILILDEATSALDTETEALIQDALKKLLKGRTTLIIAHRLSTIKNADRIIVLDNGRIVERGTHE 548 (567)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeccccccCHHhHHHHHHHHHHHhcCCEEEEEeccHhHHHhCCEEEEEECCEEEEecCHH
Confidence 99999999999999999999999999999999999999999888889999999999999999999999999999999999
Q ss_pred HHhcCCCChhHHHHHHhh
Q 000789 597 ELIKDPEGPYTQLVRLQE 614 (1283)
Q Consensus 597 ~l~~~~~~~~~~~~~~~~ 614 (1283)
||+++ +|.|+++|..|.
T Consensus 549 eLl~~-~g~y~~l~~~~~ 565 (567)
T COG1132 549 ELLAK-GGLYARLYQAQG 565 (567)
T ss_pred HHHHc-CCHHHHHHHHhh
Confidence 99998 999999998764
No 16
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=1.4e-86 Score=887.22 Aligned_cols=571 Identities=29% Similarity=0.465 Sum_probs=492.4
Q ss_pred hHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 37 PFYKLFAFADKQDAVLMIVGTISAIGSGLAHPFMTLIFGHLINSFGSSDRSHVVHEVSKVAVKFLYLAAGTGIAAFLQVS 116 (1283)
Q Consensus 37 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (1283)
.+++++++.+++++ .++++++++++.+++.|++|++++.++|.+.... ........+++++++++++.+++.+++.+
T Consensus 812 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~l~~~~~~i~~~~~~~l~~~ 888 (1466)
T PTZ00265 812 NLRIVYREIFSYKK-DVTIIALSILVAGGLYPVFALLYAKYVSTLFDFA--NLEANSNKYSLYILVIAIAMFISETLKNY 888 (1466)
T ss_pred hHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcch--HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45566777666544 4677888888999999999999999999764221 11112334456666677778888999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCChhhHhc-cCCccHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Q 000789 117 CWMVTGERQATRIRGLYLKTILRQDIGFFDT-ETTTGEVIGRMSGDTILIQEAMGEKVGKFIQLMSTFFGGFVVALARGW 195 (1283)
Q Consensus 117 ~~~~~~~~~~~~lR~~~~~~ll~~~~~~f~~-~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 195 (1283)
+..+.++++..++|.++|++++++|++||++ ++++|++++|+++|++.++.++...+..++..++.++++++++++++|
T Consensus 889 ~~~~~~~~~~~~lR~~lf~~ll~~~~~~fd~~~~~~G~l~srl~~Dv~~l~~~~~~~l~~~~~~i~~~i~~~~~~~~~~~ 968 (1466)
T PTZ00265 889 YNNVIGEKVEKTMKRRLFENILYQEISFFDQDKHAPGLLSAHINRDVHLLKTGLVNNIVIFTHFIVLFLVSMVMSFYFCP 968 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999985 237899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH-----------------HHHHHHHHHHHHHHHHhhHHHHHHhccHHHHH
Q 000789 196 FLALVLLACLPAIVIAGGSMALIMSKMS-SR-----------------GQIAYSEAGTVVEQTVSGIRTVSSFTGEKQAI 257 (1283)
Q Consensus 196 ~l~l~~l~~~p~~~~~~~~~~~~~~~~~-~~-----------------~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~ 257 (1283)
.+++++++++++ +...+.++.+... ++ .++..++.+..++|.++|+++||+|+.|+.+.
T Consensus 969 ~l~l~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~~~ 1045 (1466)
T PTZ00265 969 IVAAVLTGTYFI---FMRVFAIRARLTANKDVEKKEINQPGTVFAYNSDDEIFKDPSFLIQEAFYNMNTVIIYGLEDYFC 1045 (1466)
T ss_pred HHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHhhhccccccccchhhhHHHHHHHHHHHHHHHhcHHHHHHhcchHHHH
Confidence 988876544433 3334444332211 11 23345677899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 258 EKYNNKLQVAYRAAVQQGMVSGIGLGVLMLTVIGTYGLAVWYGSKLIIEKGYNGGTVINVIMAIMTGGMSLGQTSPCLNA 337 (1283)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~t~g~~~~~~~~~~~~~~~l~~~~~~~~~ 337 (1283)
++|.+..+...+...+.....++..++..++..+..++++|+|++++..|.+++|.+++++.+++....++..+...+..
T Consensus 1046 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~lv~~g~it~g~l~~~~~~~~~~~~~~~~l~~~~~~ 1125 (1466)
T PTZ00265 1046 NLIEKAIDYSNKGQKRKTLVNSMLWGFSQSAQLFINSFAYWFGSFLIRRGTILVDDFMKSLFTFLFTGSYAGKLMSLKGD 1125 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999988888888888888888888888888899999999999999999999999887776666677888888999
Q ss_pred HHHHHHHHHHHHHHHccCCCCCCCCCCCCc---ccCccccEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCC
Q 000789 338 FAGGQAAAYKMFETIKRKPKIDPYDTSGIT---LEKIEGEIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGS 414 (1283)
Q Consensus 338 ~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~---~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGs 414 (1283)
++++.++++|++++++.+++.+........ ++..++.|+|+||+|+||++++.++|+|+||+|+||+++||||||||
T Consensus 1126 ~~~a~~a~~ri~~ll~~~~~~~~~~~~~~~~~~~~~~~g~I~f~nVsF~Y~~~~~~~vL~~lsl~i~~G~~vAIVG~SGs 1205 (1466)
T PTZ00265 1126 SENAKLSFEKYYPLIIRKSNIDVRDNGGIRIKNKNDIKGKIEIMDVNFRYISRPNVPIYKDLTFSCDSKKTTAIVGETGS 1205 (1466)
T ss_pred HHHHHHHHHHHHHHHCCCCcCCCCCCcccccccCCCCCceEEEEEEEEECCCCCCCccccCeeEEEcCCCEEEEECCCCC
Confidence 999999999999999876644221111111 22345789999999999876556899999999999999999999999
Q ss_pred cHHHHHHHHHcCCCC------------------------------------------------------CCceEEECCcc
Q 000789 415 GKSTVISLVERFYDP------------------------------------------------------DAGEVLIDGID 440 (1283)
Q Consensus 415 GKSTl~~ll~~~~~~------------------------------------------------------~~G~i~~~g~~ 440 (1283)
|||||+++|+|+|+| ++|+|++||+|
T Consensus 1206 GKSTl~~LL~r~ydp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG~d 1285 (1466)
T PTZ00265 1206 GKSTVMSLLMRFYDLKNDHHIVFKNEHTNDMTNEQDYQGDEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDGVD 1285 (1466)
T ss_pred CHHHHHHHHHHhCCCccccccccccccccccccccccccccccccccccccccccccccccccccccCCCCCeEEECCEE
Confidence 999999999999999 69999999999
Q ss_pred cCCCCHHHHhcccEEEccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHH
Q 000789 441 IKKLQLKWIREKIGLVSQEPILFATSLRENIAYGKENATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQ 520 (1283)
Q Consensus 441 ~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkq 520 (1283)
+++++.+++|++||||+|||+||++||+|||+||.|+++++++++||+.+++++||.+||+||||.+||+|.+|||||||
T Consensus 1286 i~~~~~~~lR~~i~~V~Qep~LF~gTIreNI~~g~~~at~eeI~~A~k~A~l~~fI~~LP~GydT~VGe~G~~LSGGQkQ 1365 (1466)
T PTZ00265 1286 ICDYNLKDLRNLFSIVSQEPMLFNMSIYENIKFGKEDATREDVKRACKFAAIDEFIESLPNKYDTNVGPYGKSLSGGQKQ 1365 (1466)
T ss_pred HHhCCHHHHHhhccEeCCCCccccccHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCccccCCccCCCCCcCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc--CCCeEEEEecCchhhhccCEEEEEeC----CEEe-Eec
Q 000789 521 RIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIM--TSRTTVVVAHRLTTIRNADLIAVVHQ----GKIV-EKG 593 (1283)
Q Consensus 521 riaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~~d~i~vl~~----G~i~-~~g 593 (1283)
||||||||+++|+|||||||||+||+++|+.|+++|.++. +++|+|+||||++++++||+|+||++ |+++ |+|
T Consensus 1366 RIaIARALlr~p~ILLLDEaTSaLD~~sE~~I~~~L~~~~~~~~~TvIiIaHRlsti~~aD~Ivvl~~~~~~G~iv~e~G 1445 (1466)
T PTZ00265 1366 RIAIARALLREPKILLLDEATSSLDSNSEKLIEKTIVDIKDKADKTIITIAHRIASIKRSDKIVVFNNPDRTGSFVQAHG 1445 (1466)
T ss_pred HHHHHHHHhcCCCEEEEeCcccccCHHHHHHHHHHHHHHhccCCCEEEEEechHHHHHhCCEEEEEeCCCCCCCEEEEec
Confidence 9999999999999999999999999999999999999984 68999999999999999999999999 9955 899
Q ss_pred ChhHHhcCCCChhHHHHHHh
Q 000789 594 THDELIKDPEGPYTQLVRLQ 613 (1283)
Q Consensus 594 ~~~~l~~~~~~~~~~~~~~~ 613 (1283)
+|+||+++.+|.|++++..|
T Consensus 1446 th~eLl~~~~g~Y~~l~~~~ 1465 (1466)
T PTZ00265 1446 THEELLSVQDGVYKKYVKLA 1465 (1466)
T ss_pred CHHHHHhcCCChHHHHHhhc
Confidence 99999974479999998754
No 17
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=8.6e-86 Score=823.00 Aligned_cols=554 Identities=35% Similarity=0.570 Sum_probs=491.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 714 EFPVLLIGSIAAGIHGVIFPIFGLLLSSSIRMFFEPEDKLRKDSRFWALIYLVLGIINLIAVPFQNYFFGVAGGKLIRRI 793 (1283)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~l 793 (1283)
.+ .+.++.++..+...+.....++++..++.... .......+..+++++.++..++.++..++..+.+.+...++
T Consensus 13 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~----~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~l 87 (567)
T COG1132 13 YK-LLLLAILLLLLSALLSLLLPLLIGRIIDALLA----DLGELLELLLLLLLLALLGGVLRALQSYLGSRLGQKIVADL 87 (567)
T ss_pred HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44 55555555555555555566666666655441 11122334444555556777788888888888889999999
Q ss_pred HHHHHHHHHcCCccccccCCCChhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Q 000789 794 RSLTFEKVVHQEISWFDDPANSSGSVGARLSTDASTIRSLVGDSLALVVQNIATIAAGLIIAFTANWILAFVILAVSPLM 873 (1283)
Q Consensus 794 r~~~~~~ll~~~~~ff~~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~l~~~pl~ 873 (1283)
|.++|+++++.|++||++ +++|++++|+++|++.++..+......+...++.+++.+++++..+|.+++++++..|++
T Consensus 88 r~~~~~~l~~~~~~~~~~--~~~g~l~~~~t~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~ 165 (567)
T COG1132 88 RRDLFEKLLRLPLSFFDK--AKSGDLISRLTNDVEAVSNLVSTVLVLVFTSILLLIGSLVLLFSLSWRLALILLLILPLL 165 (567)
T ss_pred HHHHHHHHHhCCHHHhCc--CCcchHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 999999999999999996 789999999999999999999988666776888999999999999999999999998888
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHhcHHHhHHHHHHHHHHHHHHHHHH
Q 000789 874 LVQGYTQTKFMKGFSADAKLMYEEASQVANDAVGSIRTVASFCSEEKVMDLYEKKCEGPLKNGVRRGILSGAGFGFSFLV 953 (1283)
Q Consensus 874 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 953 (1283)
.+......+..++..+..++..++..+.+.|.+.|+++||+|+.++...++|.+..+...+...+.....+...++...+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (567)
T COG1132 166 ALVLSLLARKSRKLSRRVREALGELNARLLESLSGIRVIKAFGAEDRELKRFEEANEELRRANLRASRLEALLAPLMLLL 245 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88877777666777888888889999999999999999999999999999999999988888877777777777888888
Q ss_pred HHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCcCCcc
Q 000789 954 LYCTNAFCFYIGSVLVEHGKATFGQVFKVFFALTISALGVSQTSAMAPDTTKAKDSAASIFEILDSKPKIDSSKDEGMTL 1033 (1283)
Q Consensus 954 ~~~~~~~~~~~g~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~ 1033 (1283)
..+...+++++|..++..+.+++|.+.+++.+......++..+......+..+..+.+|++++++.+++....... .
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~---~ 322 (567)
T COG1132 246 SSLGTVLVLALGGFLVLSGSLTVGALAAFILYLLRLLTPILQLGEVVSLLQRASAAAERLFELLDEEPEVEDPPDP---L 322 (567)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCC---C
Confidence 8889999999999999999999999999999999999999999999999999999999999999986653322211 2
Q ss_pred CCCcccEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHH
Q 000789 1034 SSVGGAIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSW 1113 (1283)
Q Consensus 1034 ~~~~g~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~ 1113 (1283)
....+.|+|+||+|+|++ ++++|+|+||+|+|||++||||||||||||++++|+|+|+|++|+|+|||+||++++.++
T Consensus 323 ~~~~~~I~f~~vsf~y~~--~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~~G~I~idg~dI~~i~~~~ 400 (567)
T COG1132 323 KDTIGSIEFENVSFSYPG--KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPTSGEILIDGIDIRDISLDS 400 (567)
T ss_pred CCCCCeEEEEEEEEEcCC--CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCEehhhcCHHH
Confidence 234567999999999984 357999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcceEEEccCCCCChhhHHHHHhcCCCCCCCHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHHHH
Q 000789 1114 LRQQMGLVSQEPVLFNETIRTNIAYGKQGGATEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARA 1193 (1283)
Q Consensus 1114 lR~~i~~V~Qdp~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiARA 1193 (1283)
||++|++|||||+||++||+|||++|.+ +++|||+++||+.++++|||+++|+||||.|||+|.+||||||||||||||
T Consensus 401 lr~~I~~V~Qd~~LF~~TI~~NI~~g~~-~at~eei~~a~k~a~~~d~I~~lp~g~dt~vge~G~~LSgGQrQrlaiARa 479 (567)
T COG1132 401 LRKRIGIVSQDPLLFSGTIRENIALGRP-DATDEEIEEALKLANAHEFIANLPDGYDTIVGERGVNLSGGQRQRLAIARA 479 (567)
T ss_pred HHHhccEEcccceeecccHHHHHhcCCC-CCCHHHHHHHHHHhChHHHHHhCcccccceecCCCccCCHHHHHHHHHHHH
Confidence 9999999999999999999999999954 699999999999999999999999999999999999999999999999999
Q ss_pred HccCCCEEEEecccCCCCHHHHHHHHHHHHHHcCCceEEEEecCchHHhhcCEEEEEeCCEEEEecChHHHHhccCchhH
Q 000789 1194 VLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALMKITDGAYA 1273 (1283)
Q Consensus 1194 ll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~~D~I~vl~~G~Ive~Gt~~eLl~~~~g~y~ 1273 (1283)
++++|+|||||||||+||++||+.|++++++..+++|+|+||||++|+++||+|+|||+|+|+|+|+|+||+++ +|.|+
T Consensus 480 ll~~~~ILILDEaTSalD~~tE~~I~~~l~~l~~~rT~iiIaHRlsti~~aD~IiVl~~G~i~e~G~h~eLl~~-~g~y~ 558 (567)
T COG1132 480 LLRNPPILILDEATSALDTETEALIQDALKKLLKGRTTLIIAHRLSTIKNADRIIVLDNGRIVERGTHEELLAK-GGLYA 558 (567)
T ss_pred HhcCCCEEEEeccccccCHHhHHHHHHHHHHHhcCCEEEEEeccHhHHHhCCEEEEEECCEEEEecCHHHHHHc-CCHHH
Confidence 99999999999999999999999999999988889999999999999999999999999999999999999997 99999
Q ss_pred HHHHHhhc
Q 000789 1274 SLVALHVS 1281 (1283)
Q Consensus 1274 ~L~~~~~~ 1281 (1283)
+||+.|..
T Consensus 559 ~l~~~~~~ 566 (567)
T COG1132 559 RLYQAQGG 566 (567)
T ss_pred HHHHHhhc
Confidence 99998864
No 18
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=9.5e-86 Score=838.07 Aligned_cols=566 Identities=33% Similarity=0.541 Sum_probs=502.3
Q ss_pred cchhHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 34 QKVPFYKLFAFADKQDAVLMIVGTISAIGSGLAHPFMTLIFGHLINSFGSSDRSHVVHEVSKVAVKFLYLAAGTGIAAFL 113 (1283)
Q Consensus 34 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (1283)
....+++++++.++. +..++.++++.++.++.....|++++.++|.+...... ..+....++++++.++..++.++
T Consensus 145 ~~~~~~~l~~~~~~~-~~~l~~~~~~~~~~~l~~~~~p~~~~~iid~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l 220 (711)
T TIGR00958 145 TADLLFRLLGLSGRD-WPWLISAFVFLTLSSLGEMFIPFYTGRVIDTLGGDKGP---PALASAIFFMCLLSIASSVSAGL 220 (711)
T ss_pred hhhHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCH---HHHHHHHHHHHHHHHHHHHHHHH
Confidence 345677888888765 44566777788888888888999999999987533211 11222233344445556677888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCccHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 114 QVSCWMVTGERQATRIRGLYLKTILRQDIGFFDTETTTGEVIGRMSGDTILIQEAMGEKVGKFIQLMSTFFGGFVVALAR 193 (1283)
Q Consensus 114 ~~~~~~~~~~~~~~~lR~~~~~~ll~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 193 (1283)
+.++..+.+.++..++|.++|++++++|+++|++. ++|++++|+++|++.+++.+...+..++..++.+++.+++++.+
T Consensus 221 ~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~f~~~-~~G~i~srl~~Di~~i~~~~~~~~~~~l~~~~~~i~~~~~l~~~ 299 (711)
T TIGR00958 221 RGGSFNYTMARINLRIREDLFRSLLRQDLGFFDEN-KTGELTSRLSSDTQTMSRSLSLNVNVLLRNLVMLLGLLGFMLWL 299 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHcCC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888899999999999999999999999999976 99999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHHHHHHHH
Q 000789 194 GWFLALVLLACLPAIVIAGGSMALIMSKMSSRGQIAYSEAGTVVEQTVSGIRTVSSFTGEKQAIEKYNNKLQVAYRAAVQ 273 (1283)
Q Consensus 194 ~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~ 273 (1283)
+|.+++++++.+|+.+++..++.++.++..++.++..++.++.+.|.++|+++||+|+.|+.+.++|.+..++..+...+
T Consensus 300 s~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~ 379 (711)
T TIGR00958 300 SPRLTMVTLINLPLVFLAEKVFGKRYQLLSEELQEAVAKANQVAEEALSGMRTVRSFAAEEGEASRFKEALEETLQLNKR 379 (711)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998888877
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 000789 274 QGMVSGIGLGVLMLTVIGTYGLAVWYGSKLIIEKGYNGGTVINVIMAIMTGGMSLGQTSPCLNAFAGGQAAAYKMFETIK 353 (1283)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~t~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~ 353 (1283)
.....+....+..++..+..++++++|++++.+|.++.|.+++++.+......|+..+...+..++++..+.+|++++++
T Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~il~~g~~lv~~g~it~G~lva~~~~~~~l~~~l~~l~~~~~~~~~~~~a~~ri~~~l~ 459 (711)
T TIGR00958 380 KALAYAGYLWTTSVLGMLIQVLVLYYGGQLVLTGKVSSGNLVSFLLYQEQLGEAVRVLSYVYSGMMQAVGASEKVFEYLD 459 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 77766666666666666677778889999999999999999999999999999999999999999999999999999998
Q ss_pred cCCCCCCCCCCCCcccCccccEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCce
Q 000789 354 RKPKIDPYDTSGITLEKIEGEIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGE 433 (1283)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~ 433 (1283)
.+++.++.. ...+.+..+.|+|+||+|+|++++++++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+
T Consensus 460 ~~~~~~~~~--~~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~G~ 537 (711)
T TIGR00958 460 RKPNIPLTG--TLAPLNLEGLIEFQDVSFSYPNRPDVPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQPTGGQ 537 (711)
T ss_pred CCCCCCCCC--CCCCCCCCCeEEEEEEEEECCCCCCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCCCCCE
Confidence 766543221 112223457899999999998655568999999999999999999999999999999999999999999
Q ss_pred EEECCcccCCCCHHHHhcccEEEccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCC
Q 000789 434 VLIDGIDIKKLQLKWIREKIGLVSQEPILFATSLRENIAYGKENATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQ 513 (1283)
Q Consensus 434 i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~ 513 (1283)
|++||+|+++++.+++|++|+||+|||++|++||+|||.+|.++.++++++++++.++++++++++|+|+||.+||+|.+
T Consensus 538 I~idg~~i~~~~~~~lr~~i~~v~Q~~~lF~gTIreNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~ 617 (711)
T TIGR00958 538 VLLDGVPLVQYDHHYLHRQVALVGQEPVLFSGSVRENIAYGLTDTPDEEIMAAAKAANAHDFIMEFPNGYDTEVGEKGSQ 617 (711)
T ss_pred EEECCEEHHhcCHHHHHhhceEEecCccccccCHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCCCccCCcccCCCCc
Confidence 99999999999999999999999999999999999999999988899999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhccCEEEEEeCCEEeEec
Q 000789 514 LSGGQKQRIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMTSRTTVVVAHRLTTIRNADLIAVVHQGKIVEKG 593 (1283)
Q Consensus 514 LSgGqkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g 593 (1283)
|||||||||+||||++++|+|||||||||+||+++|+.+++ ....+++|+|+||||+++++.||+|++|++|+|+|+|
T Consensus 618 LSGGQkQRlalARALl~~p~ILILDEpTSaLD~~te~~i~~--~~~~~~~TvIiItHrl~~i~~aD~IivL~~G~ive~G 695 (711)
T TIGR00958 618 LSGGQKQRIAIARALVRKPRVLILDEATSALDAECEQLLQE--SRSRASRTVLLIAHRLSTVERADQILVLKKGSVVEMG 695 (711)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEEccccccCHHHHHHHHH--hhccCCCeEEEEeccHHHHHhCCEEEEEECCEEEEee
Confidence 99999999999999999999999999999999999999998 3334689999999999999999999999999999999
Q ss_pred ChhHHhcCCCChhHHH
Q 000789 594 THDELIKDPEGPYTQL 609 (1283)
Q Consensus 594 ~~~~l~~~~~~~~~~~ 609 (1283)
+|+||+++ ++.|+++
T Consensus 696 t~~eL~~~-~~~y~~l 710 (711)
T TIGR00958 696 THKQLMED-QGCYKHL 710 (711)
T ss_pred CHHHHHhC-CCchHhc
Confidence 99999987 7888765
No 19
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=2e-85 Score=824.73 Aligned_cols=568 Identities=22% Similarity=0.289 Sum_probs=482.3
Q ss_pred HHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 704 MRRLAYLNKPEFPVLLIGSIAAGIHGVIFPIFGLLLSSSIRMFFEPEDKLRKDSRFWALIYLVLGIINLIAVPFQNYFFG 783 (1283)
Q Consensus 704 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~ 783 (1283)
+++++.+.++.++.+++++++..+..++....++++...++........ ......+..+++++.++..++.+++.++..
T Consensus 10 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (588)
T PRK11174 10 TRWLKQQSKPAKRWLNLSILLGFLSGLLLIAQAWLLATILQALIIENIP-REALLPPFILLILLFVLRALLAWLRERVGF 88 (588)
T ss_pred hHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566777788888888888888888888777888888777654321111 111223444455566677788888999999
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCccccccCCCChhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Q 000789 784 VAGGKLIRRIRSLTFEKVVHQEISWFDDPANSSGSVGARLSTDASTIRSLVGDSLALVVQNIATIAAGLIIAFTANWILA 863 (1283)
Q Consensus 784 ~~~~~~~~~lr~~~~~~ll~~~~~ff~~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~ 863 (1283)
..+.++..++|.++|+++++.|.+||++ +++|++++|+++|++.+++.+...+..++..++.+++.+++++.++|+++
T Consensus 89 ~~~~~~~~~lr~~~~~~ll~~~~~~~~~--~~~g~l~s~~~~dv~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 166 (588)
T PRK11174 89 KAGQHIRQQIRQQVLDKLQQLGPAWIQG--KPAGSWATLVLEQVEDMHDFYARYLPQMALAVLVPLLILIAVFPINWAAG 166 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCchhhcc--CCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999995 88999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHhcHHHhHHHHHHHH
Q 000789 864 FVILAVSPLMLVQGYTQTKFMKGFSADAKLMYEEASQVANDAVGSIRTVASFCSEEKVMDLYEKKCEGPLKNGVRRGILS 943 (1283)
Q Consensus 864 lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 943 (1283)
+++++++|++++......+..+...++..+...+..+.+.|.++|+++||+|+.|+.+.++|.+..++..+...+.....
T Consensus 167 l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (588)
T PRK11174 167 LILLGTAPLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLRGLETLRLFNRGEAETESIRSASEDFRQRTMEVLRMA 246 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999988887777777777777888888889999999999999999999999999999999998888777666665
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 944 GAGFGFSFLVLYCTNAFCFYIGSVLVEHGKATFGQV---------FKVFFALTISALGVSQTSAMAPDTTKAKDSAASIF 1014 (1283)
Q Consensus 944 ~~~~~~~~~~~~~~~~~~~~~g~~l~~~g~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~ 1014 (1283)
.....+...+..+..+++.+++++.+ .|.+++|.+ +.+..+......|+..+...+..+..+..+.+|+.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~t~G~l~~~~~~~~~~~~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~ 325 (588)
T PRK11174 247 FLSSAVLEFFASISIALVAVYFGFSY-LGELNFGHYGTGVTLFAGFFVLILAPEFYQPLRDLGTFYHAKAQAVGAAESLV 325 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-hcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55555554444444444444444433 377776653 22223445566889999999999999999999999
Q ss_pred HHhccCCCCCCCCCcCCccCCCcccEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCC
Q 000789 1015 EILDSKPKIDSSKDEGMTLSSVGGAIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDP 1094 (1283)
Q Consensus 1015 ~~~~~~~~~~~~~~~~~~~~~~~g~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~ 1094 (1283)
++++.+++...... ...+....+.|+|+||+|.|++ ++++|+|+||+|+|||++||||+||||||||+++|+|+| |
T Consensus 326 ~~l~~~~~~~~~~~-~~~~~~~~~~i~~~~vsf~~~~--~~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p 401 (588)
T PRK11174 326 TFLETPLAHPQQGE-KELASNDPVTIEAEDLEILSPD--GKTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-P 401 (588)
T ss_pred HHHcCCCcccCCCc-cccCCCCCceEEEEeeEEeccC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-C
Confidence 99987653221111 0011112357999999998864 357999999999999999999999999999999999999 9
Q ss_pred CcceEEECCccCCCCChHHHhcceEEEccCCCCChhhHHHHHhcCCCCCCCHHHHHHHHHHhChHHHHHhCCCCcccccC
Q 000789 1095 DSGHVLLDNIELPKFKLSWLRQQMGLVSQEPVLFNETIRTNIAYGKQGGATEEEIIAATEASNAHNFISALPHGYETNVG 1174 (1283)
Q Consensus 1095 ~~G~I~idG~di~~~~~~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~I~~lp~Gldt~vg 1174 (1283)
++|+|++||+|+++++.+++|++|+||||||+||++||||||.+|. ++++|||+++|++.|++++||+++|+||||.||
T Consensus 402 ~~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~LF~~TI~eNI~~g~-~~~~~eei~~al~~a~l~~~i~~lp~G~dT~vg 480 (588)
T PRK11174 402 YQGSLKINGIELRELDPESWRKHLSWVGQNPQLPHGTLRDNVLLGN-PDASDEQLQQALENAWVSEFLPLLPQGLDTPIG 480 (588)
T ss_pred CCcEEEECCEecccCCHHHHHhheEEecCCCcCCCcCHHHHhhcCC-CCCCHHHHHHHHHHhCHHHHHHhcccccccccc
Confidence 9999999999999999999999999999999999999999999984 479999999999999999999999999999999
Q ss_pred CCCCCCChhHHHHHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcCCceEEEEecCchHHhhcCEEEEEeCCE
Q 000789 1175 ERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGV 1254 (1283)
Q Consensus 1175 e~G~~LSgGQrQRlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~~D~I~vl~~G~ 1254 (1283)
|+|.+||||||||||||||++++|+|||||||||+||++||+.|+++|++..+++|+|+||||++++++||+|+||++|+
T Consensus 481 e~G~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~~~~TvIiItHrl~~i~~aD~Iivl~~G~ 560 (588)
T PRK11174 481 DQAAGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAASRRQTTLMVTHQLEDLAQWDQIWVMQDGQ 560 (588)
T ss_pred cCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhCCCEEEEEecChHHHHhCCEEEEEeCCe
Confidence 99999999999999999999999999999999999999999999999999989999999999999999999999999999
Q ss_pred EEEecChHHHHhccCchhHHHHHHhhc
Q 000789 1255 IAEQGSHDALMKITDGAYASLVALHVS 1281 (1283)
Q Consensus 1255 Ive~Gt~~eLl~~~~g~y~~L~~~~~~ 1281 (1283)
|+|.|+|+||+++ +|.|++|++.|.+
T Consensus 561 i~e~G~~~eL~~~-~~~y~~l~~~q~~ 586 (588)
T PRK11174 561 IVQQGDYAELSQA-GGLFATLLAHRQE 586 (588)
T ss_pred EeecCCHHHHHhc-chHHHHHHHHhhc
Confidence 9999999999996 8999999998865
No 20
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=3.6e-84 Score=825.24 Aligned_cols=564 Identities=26% Similarity=0.340 Sum_probs=500.1
Q ss_pred hhHHHHHHh-hchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 36 VPFYKLFAF-ADKQDAVLMIVGTISAIGSGLAHPFMTLIFGHLINSFGSSDRSHVVHEVSKVAVKFLYLAAGTGIAAFLQ 114 (1283)
Q Consensus 36 ~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (1283)
..+++++++ .++. +..++..++++++..++....|++++.++|.+..... ...+...++.++++.++.+++.+++
T Consensus 121 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~---~~~l~~~~~~~~~~~~~~~~~~~~~ 196 (686)
T TIGR03797 121 LGLRDLLRFALRGA-RRDLLAILAMGLLGTLLGMLVPIATGILIGTAIPDAD---RSLLVQIALALLAAAVGAAAFQLAQ 196 (686)
T ss_pred ccHHHHHHHHHhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC---hhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 346666666 3444 3344556667777777777888899999998753221 1223333444555556677888889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCccHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000789 115 VSCWMVTGERQATRIRGLYLKTILRQDIGFFDTETTTGEVIGRMSGDTILIQEAMGEKVGKFIQLMSTFFGGFVVALARG 194 (1283)
Q Consensus 115 ~~~~~~~~~~~~~~lR~~~~~~ll~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 194 (1283)
.++....+.++..++|.++|+|++++|+.||++. ++|++++|++ |++.+++.+...+...+..+..+++.++++++++
T Consensus 197 ~~~~~~~~~~~~~~l~~~~~~~ll~~~~~~~~~~-~~g~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 274 (686)
T TIGR03797 197 SLAVLRLETRMDASLQAAVWDRLLRLPVSFFRQY-STGDLASRAM-GISQIRRILSGSTLTTLLSGIFALLNLGLMFYYS 274 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHCCC-ChhHHHHHHh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999976 9999999997 8999999998887777777777788888999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHHHHHHHHH
Q 000789 195 WFLALVLLACLPAIVIAGGSMALIMSKMSSRGQIAYSEAGTVVEQTVSGIRTVSSFTGEKQAIEKYNNKLQVAYRAAVQQ 274 (1283)
Q Consensus 195 ~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~ 274 (1283)
|.+++++++++|+++++..++.++.++..++.++..++.++.+.|.++|+++||+++.|+.+.++|.+..++..+...+.
T Consensus 275 ~~l~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~ 354 (686)
T TIGR03797 275 WKLALVAVALALVAIAVTLVLGLLQVRKERRLLELSGKISGLTVQLINGISKLRVAGAENRAFARWAKLFSRQRKLELSA 354 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998888889999999999999999999999999999999999999999999999999999999999888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Q 000789 275 GMVSGIGLGVLMLTVIGTYGLAVWYGSKLIIEKGYNGGTVINVIMAIMTGGMSLGQTSPCLNAFAGGQAAAYKMFETIKR 354 (1283)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~t~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~ 354 (1283)
.....+...+..++..+..++++|+|++++.+|.+|+|.++++.++......|+.++...+..++++..+.+|+.++++.
T Consensus 355 ~~~~~~~~~~~~~i~~~~~~~il~~g~~lv~~g~ltiG~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~ 434 (686)
T TIGR03797 355 QRIENLLTVFNAVLPVLTSAALFAAAISLLGGAGLSLGSFLAFNTAFGSFSGAVTQLSNTLISILAVIPLWERAKPILEA 434 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 88888877777777778888889999999999999999999999998888999999999999999999999999999987
Q ss_pred CCCCCCCCCCCCcccCccccEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceE
Q 000789 355 KPKIDPYDTSGITLEKIEGEIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEV 434 (1283)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i 434 (1283)
+++.+... ..+....+.|+|+||+|+|++. ++++|+|+||+|+|||++|||||||||||||+|+|+|+|+|++|+|
T Consensus 435 ~~e~~~~~---~~~~~~~~~I~~~nvsf~Y~~~-~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I 510 (686)
T TIGR03797 435 LPEVDEAK---TDPGKLSGAIEVDRVTFRYRPD-GPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPESGSV 510 (686)
T ss_pred CcccccCc---CCCCCCCceEEEEEEEEEcCCC-CccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEE
Confidence 65532211 1122345689999999999743 3579999999999999999999999999999999999999999999
Q ss_pred EECCcccCCCCHHHHhcccEEEccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCC
Q 000789 435 LIDGIDIKKLQLKWIREKIGLVSQEPILFATSLRENIAYGKENATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQL 514 (1283)
Q Consensus 435 ~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~L 514 (1283)
++||+|+++++.+++|++||||||||++|++||+|||.+++| +++++++++++.++++++++++|+|+||.+||+|.+|
T Consensus 511 ~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~~~~~-~~~e~i~~al~~a~l~~~i~~lp~G~dt~ige~G~~L 589 (686)
T TIGR03797 511 FYDGQDLAGLDVQAVRRQLGVVLQNGRLMSGSIFENIAGGAP-LTLDEAWEAARMAGLAEDIRAMPMGMHTVISEGGGTL 589 (686)
T ss_pred EECCEEcCcCCHHHHHhccEEEccCCccCcccHHHHHhcCCC-CCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCC
Confidence 999999999999999999999999999999999999999998 8999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhccCEEEEEeCCEEeEecC
Q 000789 515 SGGQKQRIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMTSRTTVVVAHRLTTIRNADLIAVVHQGKIVEKGT 594 (1283)
Q Consensus 515 SgGqkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~ 594 (1283)
||||||||+|||||+++|+|||||||||+||+++|+.+.+.|+++ ++|+|+||||+++++.||+|+||++|+|+++|+
T Consensus 590 SGGQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~--~~T~IiItHr~~~i~~~D~Iivl~~G~iv~~G~ 667 (686)
T TIGR03797 590 SGGQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSESLERL--KVTRIVIAHRLSTIRNADRIYVLDAGRVVQQGT 667 (686)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh--CCeEEEEecChHHHHcCCEEEEEECCEEEEECC
Confidence 999999999999999999999999999999999999999999886 589999999999999999999999999999999
Q ss_pred hhHHhcCCCChhHHHHHHh
Q 000789 595 HDELIKDPEGPYTQLVRLQ 613 (1283)
Q Consensus 595 ~~~l~~~~~~~~~~~~~~~ 613 (1283)
|+||+++ ++.|++++..|
T Consensus 668 ~~~Ll~~-~~~y~~l~~~q 685 (686)
T TIGR03797 668 YDELMAR-EGLFAQLARRQ 685 (686)
T ss_pred HHHHHhC-CcHHHHHHHhc
Confidence 9999987 89999988754
No 21
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=1.4e-84 Score=827.38 Aligned_cols=564 Identities=34% Similarity=0.515 Sum_probs=498.0
Q ss_pred HHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 703 SMRRLAYLNKPEFPVLLIGSIAAGIHGVIFPIFGLLLSSSIRMFFEPEDKLRKDSRFWALIYLVLGIINLIAVPFQNYFF 782 (1283)
Q Consensus 703 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~ 782 (1283)
.+++++.+.++.++.+..+.++.++..+.....+++.+.+++......+ .........+++++.++..++.+++.+++
T Consensus 148 ~~~~l~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~~~~iid~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 225 (711)
T TIGR00958 148 LLFRLLGLSGRDWPWLISAFVFLTLSSLGEMFIPFYTGRVIDTLGGDKG--PPALASAIFFMCLLSIASSVSAGLRGGSF 225 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566777777778777777777777777777777777777765542211 11112233444455566777788888999
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCccccccCCCChhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Q 000789 783 GVAGGKLIRRIRSLTFEKVVHQEISWFDDPANSSGSVGARLSTDASTIRSLVGDSLALVVQNIATIAAGLIIAFTANWIL 862 (1283)
Q Consensus 783 ~~~~~~~~~~lr~~~~~~ll~~~~~ff~~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l 862 (1283)
.+.+.++..++|.++|++++++|++||++ +++|++++|+++|++.+++.+...+..++..++.+++.+++++..+|.+
T Consensus 226 ~~~~~~~~~~lr~~l~~~ll~~~~~~f~~--~~~G~i~srl~~Di~~i~~~~~~~~~~~l~~~~~~i~~~~~l~~~s~~l 303 (711)
T TIGR00958 226 NYTMARINLRIREDLFRSLLRQDLGFFDE--NKTGELTSRLSSDTQTMSRSLSLNVNVLLRNLVMLLGLLGFMLWLSPRL 303 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHHcC--CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 99999999999999999999999999985 8899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHhcHHHhHHHHHHH
Q 000789 863 AFVILAVSPLMLVQGYTQTKFMKGFSADAKLMYEEASQVANDAVGSIRTVASFCSEEKVMDLYEKKCEGPLKNGVRRGIL 942 (1283)
Q Consensus 863 ~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 942 (1283)
++++++..|++++......++.+...++.++...+..+.+.|+++|+++||+|+.|+++.++|.+..++..+...+....
T Consensus 304 ~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 383 (711)
T TIGR00958 304 TMVTLINLPLVFLAEKVFGKRYQLLSEELQEAVAKANQVAEEALSGMRTVRSFAAEEGEASRFKEALEETLQLNKRKALA 383 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998888888888888888888888889999999999999999999999999999999999988888777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC
Q 000789 943 SGAGFGFSFLVLYCTNAFCFYIGSVLVEHGKATFGQVFKVFFALTISALGVSQTSAMAPDTTKAKDSAASIFEILDSKPK 1022 (1283)
Q Consensus 943 ~~~~~~~~~~~~~~~~~~~~~~g~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~ 1022 (1283)
..........+..+..++++++|.+++..|.++.|.++++..+......++..+.....++.++..+.+|++++++.+++
T Consensus 384 ~~~~~~~~~~~~~~~~~~il~~g~~lv~~g~it~G~lva~~~~~~~l~~~l~~l~~~~~~~~~~~~a~~ri~~~l~~~~~ 463 (711)
T TIGR00958 384 YAGYLWTTSVLGMLIQVLVLYYGGQLVLTGKVSSGNLVSFLLYQEQLGEAVRVLSYVYSGMMQAVGASEKVFEYLDRKPN 463 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 66666666677777778888999999999999999999999999999999999999999999999999999999987665
Q ss_pred CCCCCCcCCccCCCcccEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEEC
Q 000789 1023 IDSSKDEGMTLSSVGGAIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLD 1102 (1283)
Q Consensus 1023 ~~~~~~~~~~~~~~~g~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~id 1102 (1283)
.+.... ..+.+..+.|+|+||+|+||++++.++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|++|
T Consensus 464 ~~~~~~--~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~G~I~id 541 (711)
T TIGR00958 464 IPLTGT--LAPLNLEGLIEFQDVSFSYPNRPDVPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQPTGGQVLLD 541 (711)
T ss_pred CCCCCC--CCCCCCCCeEEEEEEEEECCCCCCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEEC
Confidence 432211 111234568999999999997656689999999999999999999999999999999999999999999999
Q ss_pred CccCCCCChHHHhcceEEEccCCCCChhhHHHHHhcCCCCCCCHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCCh
Q 000789 1103 NIELPKFKLSWLRQQMGLVSQEPVLFNETIRTNIAYGKQGGATEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSG 1182 (1283)
Q Consensus 1103 G~di~~~~~~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSg 1182 (1283)
|+|+++++.+++|++|+||||||++|++||||||.++. ++++|++++++++.++++++++++|+||||.+||+|.+|||
T Consensus 542 g~~i~~~~~~~lr~~i~~v~Q~~~lF~gTIreNI~~g~-~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSG 620 (711)
T TIGR00958 542 GVPLVQYDHHYLHRQVALVGQEPVLFSGSVRENIAYGL-TDTPDEEIMAAAKAANAHDFIMEFPNGYDTEVGEKGSQLSG 620 (711)
T ss_pred CEEHHhcCHHHHHhhceEEecCccccccCHHHHHhcCC-CCCCHHHHHHHHHHcCCHHHHHhCCCccCCcccCCCCcCCH
Confidence 99999999999999999999999999999999999984 46899999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcCCceEEEEecCchHHhhcCEEEEEeCCEEEEecChH
Q 000789 1183 GQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHD 1262 (1283)
Q Consensus 1183 GQrQRlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~~D~I~vl~~G~Ive~Gt~~ 1262 (1283)
|||||||||||++++|+|||||||||+||+++|+.|++ ....+++|+|+||||+++++.||+|+||++|+|+|+|+|+
T Consensus 621 GQkQRlalARALl~~p~ILILDEpTSaLD~~te~~i~~--~~~~~~~TvIiItHrl~~i~~aD~IivL~~G~ive~Gt~~ 698 (711)
T TIGR00958 621 GQKQRIAIARALVRKPRVLILDEATSALDAECEQLLQE--SRSRASRTVLLIAHRLSTVERADQILVLKKGSVVEMGTHK 698 (711)
T ss_pred HHHHHHHHHHHHhcCCCEEEEEccccccCHHHHHHHHH--hhccCCCeEEEEeccHHHHHhCCEEEEEECCEEEEeeCHH
Confidence 99999999999999999999999999999999999999 3345789999999999999999999999999999999999
Q ss_pred HHHhccCchhHHHH
Q 000789 1263 ALMKITDGAYASLV 1276 (1283)
Q Consensus 1263 eLl~~~~g~y~~L~ 1276 (1283)
||+++ +|.|++|+
T Consensus 699 eL~~~-~~~y~~lv 711 (711)
T TIGR00958 699 QLMED-QGCYKHLV 711 (711)
T ss_pred HHHhC-CCchHhcC
Confidence 99996 89999874
No 22
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=5.6e-84 Score=826.36 Aligned_cols=565 Identities=25% Similarity=0.395 Sum_probs=500.0
Q ss_pred hhHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 36 VPFYKLFAFADKQDAVLMIVGTISAIGSGLAHPFMTLIFGHLINSFGSSDRSHVVHEVSKVAVKFLYLAAGTGIAAFLQV 115 (1283)
Q Consensus 36 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (1283)
..+++++++.+++++ .++..++++++..++....|++++.++|.+..... ...+...++.++++.++..++.+++.
T Consensus 142 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~p~~~~~iiD~v~~~~~---~~~l~~~~~~~~~~~~~~~~~~~~~~ 217 (708)
T TIGR01193 142 NSLLKFIPLITRQKK-LIVNIVIAAIIVTLISIAGSYYLQKIIDTYIPHKM---MGTLGIISIGLIIAYIIQQILSYIQI 217 (708)
T ss_pred chHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC---hHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456677777776544 44555666667777777888899999998654321 12223333344445556677888889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCccHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Q 000789 116 SCWMVTGERQATRIRGLYLKTILRQDIGFFDTETTTGEVIGRMSGDTILIQEAMGEKVGKFIQLMSTFFGGFVVALARGW 195 (1283)
Q Consensus 116 ~~~~~~~~~~~~~lR~~~~~~ll~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 195 (1283)
++..+.+.++..++|.++|+|++++|+.||++. ++|++++|++ |++.+++++...+...+..+..+++.++++++++|
T Consensus 218 ~~~~~~~~~~~~~l~~~~~~~ll~l~~~~f~~~-~~G~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 295 (708)
T TIGR01193 218 FLLNVLGQRLSIDIILSYIKHLFELPMSFFSTR-RTGEIVSRFT-DASSIIDALASTILSLFLDMWILVIVGLFLVRQNM 295 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCC-chhHHHHHhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 999999999999999999999999999999976 9999999998 99999999888888888888888888888999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 196 FLALVLLACLPAIVIAGGSMALIMSKMSSRGQIAYSEAGTVVEQTVSGIRTVSSFTGEKQAIEKYNNKLQVAYRAAVQQG 275 (1283)
Q Consensus 196 ~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~ 275 (1283)
.+++++++.+|+++++..++.++.++..++.++..++.++.+.|.++|+++||+|+.|+.+.++|.+...+..+...+..
T Consensus 296 ~l~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~ 375 (708)
T TIGR01193 296 LLFLLSLLSIPVYAVIIILFKRTFNKLNHDAMQANAVLNSSIIEDLNGIETIKSLTSEAERYSKIDSEFGDYLNKSFKYQ 375 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Q 000789 276 MVSGIGLGVLMLTVIGTYGLAVWYGSKLIIEKGYNGGTVINVIMAIMTGGMSLGQTSPCLNAFAGGQAAAYKMFETIKRK 355 (1283)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~t~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~ 355 (1283)
...+....+..++..+..++++++|++++.+|.+|+|.++++.++......|+.++...+..++.+..+.+|+.++++.+
T Consensus 376 ~~~~~~~~~~~~~~~~~~i~il~~g~~lv~~g~ls~G~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~ 455 (708)
T TIGR01193 376 KADQGQQAIKAVTKLILNVVILWTGAYLVMRGKLTLGQLITFNALLSYFLTPLENIINLQPKLQAARVANNRLNEVYLVD 455 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 77777777777777777788889999999999999999999999999889999999999999999999999999999876
Q ss_pred CCCCCCCCCCCcccCccccEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEE
Q 000789 356 PKIDPYDTSGITLEKIEGEIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVL 435 (1283)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~ 435 (1283)
++.+.... ....+...+.|+++||+|+|++ ++++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|+
T Consensus 456 ~e~~~~~~-~~~~~~~~~~I~~~~vsf~y~~--~~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p~~G~I~ 532 (708)
T TIGR01193 456 SEFINKKK-RTELNNLNGDIVINDVSYSYGY--GSNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQARSGEIL 532 (708)
T ss_pred Cccccccc-ccCCCCCCCcEEEEEEEEEcCC--CCcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCCcEEE
Confidence 55432211 0112234578999999999974 34799999999999999999999999999999999999999999999
Q ss_pred ECCcccCCCCHHHHhcccEEEccCCCCCcccHHHHHhcC-CCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCC
Q 000789 436 IDGIDIKKLQLKWIREKIGLVSQEPILFATSLRENIAYG-KENATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQL 514 (1283)
Q Consensus 436 ~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~-~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~L 514 (1283)
+||+|+++++.+++|++||||||||++|++||+|||.++ .+++++++++++++.++++++++++|+||||.+||+|.+|
T Consensus 533 idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~l~~~~~~~~~~i~~a~~~a~l~~~i~~lp~gldt~i~e~G~~L 612 (708)
T TIGR01193 533 LNGFSLKDIDRHTLRQFINYLPQEPYIFSGSILENLLLGAKENVSQDEIWAACEIAEIKDDIENMPLGYQTELSEEGSSI 612 (708)
T ss_pred ECCEEHHHcCHHHHHHheEEEecCceehhHHHHHHHhccCCCCCCHHHHHHHHHHhCCHHHHHhcccccCcEecCCCCCC
Confidence 999999999999999999999999999999999999999 5788999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhccCEEEEEeCCEEeEecC
Q 000789 515 SGGQKQRIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMTSRTTVVVAHRLTTIRNADLIAVVHQGKIVEKGT 594 (1283)
Q Consensus 515 SgGqkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~ 594 (1283)
||||||||+||||++++|+|||||||||+||+++|+.+.+.|+++ +++|+|+||||+++++.||+|++|++|++++.|+
T Consensus 613 SgGQrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~-~~~T~IiitHr~~~~~~~D~i~~l~~G~i~~~G~ 691 (708)
T TIGR01193 613 SGGQKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNL-QDKTIIFVAHRLSVAKQSDKIIVLDHGKIIEQGS 691 (708)
T ss_pred CHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh-cCCEEEEEecchHHHHcCCEEEEEECCEEEEECC
Confidence 999999999999999999999999999999999999999999985 6899999999999999999999999999999999
Q ss_pred hhHHhcCCCChhHHHHH
Q 000789 595 HDELIKDPEGPYTQLVR 611 (1283)
Q Consensus 595 ~~~l~~~~~~~~~~~~~ 611 (1283)
|+||+++ ++.|+++++
T Consensus 692 ~~~L~~~-~~~y~~l~~ 707 (708)
T TIGR01193 692 HDELLDR-NGFYASLIH 707 (708)
T ss_pred HHHHHhc-CCcHHHHhh
Confidence 9999987 789998874
No 23
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=8.3e-84 Score=802.96 Aligned_cols=566 Identities=23% Similarity=0.328 Sum_probs=492.5
Q ss_pred HHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 38 FYKLFAFADKQDAVLMIVGTISAIGSGLAHPFMTLIFGHLINSFG-SSDRSHVVHEVSKVAVKFLYLAAGTGIAAFLQVS 116 (1283)
Q Consensus 38 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (1283)
+++++++.+++++ .+++++++.++..++....|+++++++|... .................++++.++..++.+++.+
T Consensus 4 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (574)
T PRK11160 4 LLPFLKLYKRHWF-MLSLGILLAIVTLLASIGLLTLSGWFLSASAVAGLAGLYSFNYMLPAAGVRGAAIGRTAGRYGERL 82 (574)
T ss_pred hHHHHHHHhhhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 4567777776643 4567777777778888888899999999643 2110000000111122333445567788888889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCccHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Q 000789 117 CWMVTGERQATRIRGLYLKTILRQDIGFFDTETTTGEVIGRMSGDTILIQEAMGEKVGKFIQLMSTFFGGFVVALARGWF 196 (1283)
Q Consensus 117 ~~~~~~~~~~~~lR~~~~~~ll~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 196 (1283)
+....++++..++|.++|+|++++|+.+|++. ++|++++|+++|++.+++++...+..++..++.+++.++++++++|.
T Consensus 83 ~~~~~~~~~~~~lR~~l~~~l~~~~~~~~~~~-~~g~~~srl~~Dv~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 161 (574)
T PRK11160 83 VSHDATFRVLTHLRVFTFSKLLPLSPAGLARY-RQGDLLNRLVADVDTLDHLYLRLISPLVAALVVILVLTIGLSFFDLT 161 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccChHhhccC-ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999986 99999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 197 LALVLLACLPAIVI-AGGSMALIMSKMSSRGQIAYSEAGTVVEQTVSGIRTVSSFTGEKQAIEKYNNKLQVAYRAAVQQG 275 (1283)
Q Consensus 197 l~l~~l~~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~ 275 (1283)
+++++++++|++++ +..++.++.++..++.++..++.++.+.|.++|+++||+|+.|+.+.++|++..++..+...+..
T Consensus 162 l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~ 241 (574)
T PRK11160 162 LALTLGGILLLLLLLLPLLFYRLGKKPGQDLTHLRAQYRVQLTEWLQGQAELTLFGAEDRYRQQLEQTEQQWLAAQRRQA 241 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCCHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998888887655 45667788888888899999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Q 000789 276 MVSGIGLGVLMLTVIGTYGLAVWYGSKLIIEKGYNGGTVINVIMAIMT-GGMSLGQTSPCLNAFAGGQAAAYKMFETIKR 354 (1283)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~t~g~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~ 354 (1283)
+..+...++..++..+..++++++|+++ ..|.++.|.+++++.+... ...|+..+...+..++++.++++|+.++++.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~i~~~g~~~-~~g~~t~g~l~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~ri~~ll~~ 320 (574)
T PRK11160 242 NLTGLSQALMILANGLTVVLMLWLAAGG-VGGNAQPGALIALFVFAALAAFEALMPVAGAFQHLGQVIASARRINEITEQ 320 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 8888888888777777778888999988 4789999999988766543 3457777777888999999999999999987
Q ss_pred CCCCCCCCCCCCcccCccccEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceE
Q 000789 355 KPKIDPYDTSGITLEKIEGEIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEV 434 (1283)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i 434 (1283)
+++.+.... .......+.|+++||+|+|+++ ++++|+|+||+++|||++|||||||||||||+++|+|+|+|++|+|
T Consensus 321 ~~~~~~~~~--~~~~~~~~~i~~~~v~f~y~~~-~~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~p~~G~I 397 (574)
T PRK11160 321 KPEVTFPTT--STAAADQVSLTLNNVSFTYPDQ-PQPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWDPQQGEI 397 (574)
T ss_pred CCCCCCCcc--cCCCCCCCeEEEEEEEEECCCC-CCcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceE
Confidence 765332111 1112234679999999999753 2469999999999999999999999999999999999999999999
Q ss_pred EECCcccCCCCHHHHhcccEEEccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCC
Q 000789 435 LIDGIDIKKLQLKWIREKIGLVSQEPILFATSLRENIAYGKENATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQL 514 (1283)
Q Consensus 435 ~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~L 514 (1283)
++||+|+++++.+++|++|+||+|||++|++||+|||+++.|+.++++++++++.+++++|+++ |+||||.+||+|.+|
T Consensus 398 ~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~al~~~~l~~~i~~-p~GldT~vge~g~~L 476 (574)
T PRK11160 398 LLNGQPIADYSEAALRQAISVVSQRVHLFSATLRDNLLLAAPNASDEALIEVLQQVGLEKLLED-DKGLNAWLGEGGRQL 476 (574)
T ss_pred EECCEEhhhCCHHHHHhheeEEcccchhhcccHHHHhhcCCCccCHHHHHHHHHHcCCHHHHcC-ccccCchhcCCCCCC
Confidence 9999999999999999999999999999999999999999998999999999999999999999 999999999999999
Q ss_pred ChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhccCEEEEEeCCEEeEecC
Q 000789 515 SGGQKQRIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMTSRTTVVVAHRLTTIRNADLIAVVHQGKIVEKGT 594 (1283)
Q Consensus 515 SgGqkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~ 594 (1283)
||||||||+||||++++|+|||||||||+||+++++.+++.|.++.+++|+|+||||+++++.||+|++|++|++++.|+
T Consensus 477 SgGqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~~~~tviiitHr~~~~~~~d~i~~l~~G~i~~~g~ 556 (574)
T PRK11160 477 SGGEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHAQNKTVLMITHRLTGLEQFDRICVMDNGQIIEQGT 556 (574)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEecChhHHHhCCEEEEEeCCeEEEeCC
Confidence 99999999999999999999999999999999999999999999888999999999999999999999999999999999
Q ss_pred hhHHhcCCCChhHHHHH
Q 000789 595 HDELIKDPEGPYTQLVR 611 (1283)
Q Consensus 595 ~~~l~~~~~~~~~~~~~ 611 (1283)
|+||+++ ++.|+++++
T Consensus 557 ~~~l~~~-~g~y~~l~~ 572 (574)
T PRK11160 557 HQELLAQ-QGRYYQLKQ 572 (574)
T ss_pred HHHHHhc-CcHHHHHHh
Confidence 9999987 899999885
No 24
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.5e-87 Score=739.10 Aligned_cols=554 Identities=27% Similarity=0.393 Sum_probs=470.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHH
Q 000789 53 MIVGTISAIGSGLAHPFMTLIFGHLINSFGSSDRSHVVHEVSKVAVKFLYLAA------GTGIAAFLQVSCWMVTGERQA 126 (1283)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~ 126 (1283)
.+.+.++..+.-+.....|.+.++++|.+..... +... ..+.++++.. +.++++-++.++|..+.+-..
T Consensus 217 v~~cl~ll~i~rli~~~~pi~~k~iv~~ltap~~--~~~~---~~~~~v~L~flqg~gtgsG~~~nlRtfLWi~VqQytt 291 (790)
T KOG0056|consen 217 VVFCLFLLIIGRLINVSLPILSKWIVDELTAPDT--FQYS---LVFLYVFLKFLQGGGTGSGFLNNLRTFLWIPVQQYTT 291 (790)
T ss_pred HHHHHHHHHHHHHHhhhhHHhHHHHHHhhcCcch--hhHH---HHHHHHHHHHHhcCCccccchhhhheeEEEEhhHhHH
Confidence 3444445555566777788899999998764321 1111 1111222222 235677788888989999999
Q ss_pred HHHHHHHHHHHHhCChhhHhccCCccHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhHHHHHHHHHHH
Q 000789 127 TRIRGLYLKTILRQDIGFFDTETTTGEVIGRMSGDTILIQEAMGEKVGKFIQLMSTFFGGFVV-ALARGWFLALVLLACL 205 (1283)
Q Consensus 127 ~~lR~~~~~~ll~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~l~l~~l~~~ 205 (1283)
+++-.++|+|+..++++|+-++ ++|+++..++...+.+. ++...+.++...+.-+.++++. ...++|+.++++++++
T Consensus 292 R~ie~~lfrHlh~LSlrwHL~r-rtGeVLrvmdrGtssvt-ll~yvVF~i~PtllDl~va~vYF~~~Fn~wFgLIVfl~m 369 (790)
T KOG0056|consen 292 REIETELFRHLHNLSLRWHLNR-RTGEVLRVMDRGTSSVT-LLEYVVFQIGPTLLDLGVAMVYFFIKFNIWFGLIVFLMM 369 (790)
T ss_pred HHHHHHHHHHHHhhceeeeecc-cccceeehhccCcchhh-HHHHHHhhcccHHHHhhhhhhhhhhhHhHHHHHHHHHHH
Confidence 9999999999999999999887 99999999988877776 5555555555555544444443 3457899999999988
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 206 PAIVIAGGSMALIMSKMSSRGQIAYSEAGTVVEQTVSGIRTVSSFTGEKQAIEKYNNKLQVAYRAAVQQGMVSGIGLGVL 285 (1283)
Q Consensus 206 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (1283)
.++..+...+..+..+..+++..++.+.-+...+++-+.+|||-||+|+++.++|.+...++.+...|...-..+....-
T Consensus 370 ~lY~~~Ti~iTeWRTk~rR~Mn~~~nesrAr~vDsllNFETVKyy~Ae~yEverYreAil~Yqk~E~ks~~sLnfLN~~Q 449 (790)
T KOG0056|consen 370 LLYCYVTIKITEWRTKARRKMNNSWNESRARQVDSLLNFETVKYYNAEDYEVERYREAILKYQKQEWKSLASLNFLNIVQ 449 (790)
T ss_pred HHHhheeeeeehhhHHHHHHhhhhhhhhhhhhhhhhhcchhhhccCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 88887777777777777788888888888889999999999999999999999999999998888777654444443333
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCC
Q 000789 286 MLTVIGTYGLAVWYGSKLIIEKGYNGGTVINVIMAIMTGGMSLGQTSPCLNAFAGGQAAAYKMFETIKRKPKIDPYDTSG 365 (1283)
Q Consensus 286 ~~~~~~~~~~~~~~g~~~v~~~~~t~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~ 365 (1283)
..+..++.+..-.+..++|..+.+|+|+.+.|..|++.+.+|+..++..+..+|+...-+++++++++++|++.+.+ +.
T Consensus 450 n~Ii~lgll~gsll~aY~Vt~q~ltVGDfVlf~TYliqLy~PLN~FGT~YR~iQ~nfiDmEnmfdllkee~eVvd~P-~a 528 (790)
T KOG0056|consen 450 NGIIGLGLLAGSLLCAYRVTEQTLTVGDFVLFLTYLIQLYMPLNFFGTYYRSIQKNFIDMENMFDLLKEEPEVVDLP-GA 528 (790)
T ss_pred hhhhhhHHhhhhheeeeeeeeccccccceehHHHHHHHHhCchHHHHHHHHHHHHhhhhHHHHHHHhhcCchhhcCC-CC
Confidence 33333334444444567778899999999999999999999999999999999999999999999999988876543 23
Q ss_pred CcccCccccEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCC
Q 000789 366 ITLEKIEGEIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQ 445 (1283)
Q Consensus 366 ~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~ 445 (1283)
.+....+|.|+|+||+|.|++ .+++|+||||+++||+++|+|||||+||||++++|.|||+.++|.|+|||+||++..
T Consensus 529 ~pl~~~~G~i~fsnvtF~Y~p--~k~vl~disF~v~pGktvAlVG~SGaGKSTimRlLfRffdv~sGsI~iDgqdIrnvt 606 (790)
T KOG0056|consen 529 PPLKVTQGKIEFSNVTFAYDP--GKPVLSDISFTVQPGKTVALVGPSGAGKSTIMRLLFRFFDVNSGSITIDGQDIRNVT 606 (790)
T ss_pred CCccccCCeEEEEEeEEecCC--CCceeecceEEecCCcEEEEECCCCCchhHHHHHHHHHhhccCceEEEcCchHHHHH
Confidence 344456799999999999974 568999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcccEEEccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHH
Q 000789 446 LKWIREKIGLVSQEPILFATSLRENIAYGKENATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIA 525 (1283)
Q Consensus 446 ~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiA 525 (1283)
..++|++||+||||..||++||..||.|++|.+++||+.+|++.+++||-|..+|+||+|.|||||-.||||||||+|||
T Consensus 607 ~~SLRs~IGVVPQDtvLFNdTI~yNIryak~~AsneevyaAAkAA~IHdrIl~fPegY~t~VGERGLkLSGGEKQRVAiA 686 (790)
T KOG0056|consen 607 QSSLRSSIGVVPQDTVLFNDTILYNIRYAKPSASNEEVYAAAKAAQIHDRILQFPEGYNTRVGERGLKLSGGEKQRVAIA 686 (790)
T ss_pred HHHHHHhcCcccCcceeecceeeeheeecCCCCChHHHHHHHHHhhHHHHHhcCchhhhhhhhhcccccCCcchhhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhccCEEEEEeCCEEeEecChhHHhcCCCCh
Q 000789 526 RAILKNPKILLLDEATSALDAESERIVQDALVKIMTSRTTVVVAHRLTTIRNADLIAVVHQGKIVEKGTHDELIKDPEGP 605 (1283)
Q Consensus 526 Ral~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~~~l~~~~~~~ 605 (1283)
|+++++|.|++|||+|||||..||+.|+.++.++..+||.|+|+||++++-+||.|+|+++|+|+|.|+|+||+.+.+|.
T Consensus 687 RtiLK~P~iIlLDEATSALDT~tER~IQaaL~rlca~RTtIVvAHRLSTivnAD~ILvi~~G~IvErG~HeeLl~rdgG~ 766 (790)
T KOG0056|consen 687 RTILKAPSIILLDEATSALDTNTERAIQAALARLCANRTTIVVAHRLSTIVNADLILVISNGRIVERGRHEELLKRDGGA 766 (790)
T ss_pred HHHhcCCcEEEEcchhhhcCCccHHHHHHHHHHHhcCCceEEEeeeehheecccEEEEEeCCeEeecCcHHHHHhccCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999988999
Q ss_pred hHHHHHHhhcC
Q 000789 606 YTQLVRLQEGS 616 (1283)
Q Consensus 606 ~~~~~~~~~~~ 616 (1283)
|++||+.|+..
T Consensus 767 Ya~MWq~qqa~ 777 (790)
T KOG0056|consen 767 YADMWQAQQAM 777 (790)
T ss_pred HHHHHHHHHhc
Confidence 99999877654
No 25
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.2e-83 Score=743.93 Aligned_cols=552 Identities=26% Similarity=0.345 Sum_probs=491.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 721 GSIAAGIHGVIFPIFGLLLSSSIRMFFEPEDKLRKDSRFWALIYLVLGIINLIAVPFQNYFFGVAGGKLIRRIRSLTFEK 800 (1283)
Q Consensus 721 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~lr~~~~~~ 800 (1283)
..++..+.+++....+++++..+..++... .......+...++++.++..++.+.+......++.++...+|..++++
T Consensus 5 ~~ll~~l~~i~~i~qa~llA~~l~~l~~~~--~~~~l~~~~~~l~~~~~lRa~l~~~~~~~~~~aa~~~~~~LR~~~l~~ 82 (559)
T COG4988 5 SALLAVLSGIAIIAQAALLADILTKLIEGQ--LFQSLLPLLILLLIALVLRAFLAWLRERLGYRAAAKVRASLRQLVLDK 82 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345556666677777777777776665421 123344556667777788888999999999999999999999999999
Q ss_pred HHcCCccccccCCCChhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Q 000789 801 VVHQEISWFDDPANSSGSVGARLSTDASTIRSLVGDSLALVVQNIATIAAGLIIAFTANWILAFVILAVSPLMLVQGYTQ 880 (1283)
Q Consensus 801 ll~~~~~ff~~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~ 880 (1283)
+.+.++.|-+. .++|+..+.+...++.++.++..+++.+..+.+..+..++..+..+|..+++++.+.|++.++++..
T Consensus 83 l~~~gp~~~~~--~~~g~~atl~~egve~l~~Y~~ryLPq~~~~~ivp~~i~i~v~~~~w~aalIllit~PlIPlfMilv 160 (559)
T COG4988 83 LAKLGPAFIAQ--KPAGSAATLALEGIEQLEPYYARYLPQMFLSAIVPLLILIAIFFFNWAAALILLITAPLIPLFMILV 160 (559)
T ss_pred HHhCChhhhcC--CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999885 7899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHhcHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 881 TKFMKGFSADAKLMYEEASQVANDAVGSIRTVASFCSEEKVMDLYEKKCEGPLKNGVRRGILSGAGFGFSFLVLYCTNAF 960 (1283)
Q Consensus 881 ~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 960 (1283)
....++.+++....+...++++.+.++|+.|+|+|+..+...++..+..++.++.+++.-...-...+...++.++..++
T Consensus 161 g~~a~~~s~~~~~~~~~ls~~FLD~LrGL~TLr~f~~~~~~~~~i~~~se~fR~~TM~vLriAflSs~vLeffa~lsiAl 240 (559)
T COG4988 161 GLAAKDASEKQFSALARLSGHFLDRLRGLETLRAFGRTEATEERIRKDSEDFRKATMSVLRIAFLSSAVLEFFAYLSIAL 240 (559)
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999998887666666666667777777766
Q ss_pred HHHHHHHHHhc-CCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCcCCccCCCccc
Q 000789 961 CFYIGSVLVEH-GKATFGQVFKVFFALTISALGVSQTSAMAPDTTKAKDSAASIFEILDSKPKIDSSKDEGMTLSSVGGA 1039 (1283)
Q Consensus 961 ~~~~g~~l~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~ 1039 (1283)
+..+.+..... |.+++...+.++....-++.|+..+.+.++....+..+.+.++.+++.+++.................
T Consensus 241 vAv~~g~~ll~~G~ltl~~~l~~LiLAPEff~PlR~lGs~fH~~~~g~aa~d~i~~~l~~~~~~~~~~~~~~~~~~~~~e 320 (559)
T COG4988 241 VAVYIGFRLLGEGDLTLFAGLFVLILAPEFFQPLRDLGSFFHAAAAGEAAADKLFTLLESPVATPGSGEKAEVANEPPIE 320 (559)
T ss_pred HHHHHHHHHHccCCccHHHHHHHHHHhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCCCCccccccccCCCce
Confidence 55554444455 89999999999999999999999999999999999999999999998776543322111111222335
Q ss_pred EEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHhcceE
Q 000789 1040 IELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMG 1119 (1283)
Q Consensus 1040 I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~ 1119 (1283)
|+++|++|+||+.+ ++++|+||+++||+++||||+||||||||+++|+|+++|++|+|.+||+|+++++.+.||++++
T Consensus 321 i~~~~l~~~y~~g~--~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~~~G~I~vng~~l~~l~~~~~~k~i~ 398 (559)
T COG4988 321 ISLENLSFRYPDGK--PALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPTQGEIRVNGIDLRDLSPEAWRKQIS 398 (559)
T ss_pred eeecceEEecCCCC--cccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCCCCceEEECCccccccCHHHHHhHee
Confidence 66779999999653 7999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEccCCCCChhhHHHHHhcCCCCCCCHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHHHHHccCCC
Q 000789 1120 LVSQEPVLFNETIRTNIAYGKQGGATEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPK 1199 (1283)
Q Consensus 1120 ~V~Qdp~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiARAll~~p~ 1199 (1283)
+|||+|++|+|||||||.+++ ++.+|++++++++++++.+|+.. |+|+||.+||+|.+|||||+|||++|||++++++
T Consensus 399 ~v~Q~p~lf~gTireNi~l~~-~~~s~e~i~~al~~a~l~~~v~~-p~GLdt~ige~G~~LSgGQ~QRlaLARAll~~~~ 476 (559)
T COG4988 399 WVSQNPYLFAGTIRENILLAR-PDASDEEIIAALDQAGLLEFVPK-PDGLDTVIGEGGAGLSGGQAQRLALARALLSPAS 476 (559)
T ss_pred eeCCCCccccccHHHHhhccC-CcCCHHHHHHHHHHhcHHHhhcC-CCcccchhccCCCCCCHHHHHHHHHHHHhcCCCC
Confidence 999999999999999999984 47999999999999999999999 9999999999999999999999999999999999
Q ss_pred EEEEecccCCCCHHHHHHHHHHHHHHcCCceEEEEecCchHHhhcCEEEEEeCCEEEEecChHHHHhccCchhHHHHHHh
Q 000789 1200 ILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALMKITDGAYASLVALH 1279 (1283)
Q Consensus 1200 ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~~D~I~vl~~G~Ive~Gt~~eLl~~~~g~y~~L~~~~ 1279 (1283)
++|||||||+||.+||+.|++.|.++.+++|||+||||++.+++||+|+|||+|+++|.|+|++|.++ +|.|++|+.+|
T Consensus 477 l~llDEpTA~LD~etE~~i~~~l~~l~~~ktvl~itHrl~~~~~~D~I~vld~G~l~~~g~~~~L~~~-~~~y~~l~~~q 555 (559)
T COG4988 477 LLLLDEPTAHLDAETEQIILQALQELAKQKTVLVITHRLEDAADADRIVVLDNGRLVEQGTHEELSEK-QGLYANLLKQQ 555 (559)
T ss_pred EEEecCCccCCCHhHHHHHHHHHHHHHhCCeEEEEEcChHHHhcCCEEEEecCCceeccCCHHHHhhc-CcHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999996 99999999987
Q ss_pred hc
Q 000789 1280 VS 1281 (1283)
Q Consensus 1280 ~~ 1281 (1283)
..
T Consensus 556 ~~ 557 (559)
T COG4988 556 EG 557 (559)
T ss_pred hc
Confidence 53
No 26
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=1.7e-83 Score=823.02 Aligned_cols=565 Identities=24% Similarity=0.316 Sum_probs=498.5
Q ss_pred hhHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 36 VPFYKLFAFADKQDAVLMIVGTISAIGSGLAHPFMTLIFGHLINSFGSSDRSHVVHEVSKVAVKFLYLAAGTGIAAFLQV 115 (1283)
Q Consensus 36 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (1283)
..++.++++.+++++ .+...++++++..+.....|++++.++|.+...... ..+...++.++++.++.+++.+++.
T Consensus 140 ~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~~---~~l~~~~~~~~~~~~~~~~~~~~~~ 215 (710)
T TIGR03796 140 SLLRALWRRLRGSRG-ALLYLLLAGLLLVLPGLVIPAFSQIFVDEILVQGRQ---DWLRPLLLGMGLTALLQGVLTWLQL 215 (710)
T ss_pred ccHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCh---hHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345666666666543 334555556666666677788999999976533221 1122233344445566678888889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCccHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Q 000789 116 SCWMVTGERQATRIRGLYLKTILRQDIGFFDTETTTGEVIGRMSGDTILIQEAMGEKVGKFIQLMSTFFGGFVVALARGW 195 (1283)
Q Consensus 116 ~~~~~~~~~~~~~lR~~~~~~ll~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 195 (1283)
++....+.++..++|.++|+|++++|+++|++. ++|++++|+++| +.+++++...+..++..++.+++.++++++++|
T Consensus 216 ~~~~~~~~~~~~~l~~~~~~~ll~l~~~~~~~~-~~g~~~~r~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 293 (710)
T TIGR03796 216 YYLRRLQIKLAVGMSARFLWHILRLPVRFFAQR-HAGDIASRVQLN-DQVAEFLSGQLATTALDAVMLVFYALLMLLYDP 293 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCHHHHcCC-cccHHHHHhhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999976 999999999988 689999988888889999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 196 FLALVLLACLPAIVIAGGSMALIMSKMSSRGQIAYSEAGTVVEQTVSGIRTVSSFTGEKQAIEKYNNKLQVAYRAAVQQG 275 (1283)
Q Consensus 196 ~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~ 275 (1283)
.+++++++.+|+.+++..++.++.++..++.++..++.++.+.|.++|+++||++++|+.+.++|.+...+..+...+..
T Consensus 294 ~l~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~ 373 (710)
T TIGR03796 294 VLTLIGIAFAAINVLALQLVSRRRVDANRRLQQDAGKLTGVAISGLQSIETLKASGLESDFFSRWAGYQAKLLNAQQELG 373 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Q 000789 276 MVSGIGLGVLMLTVIGTYGLAVWYGSKLIIEKGYNGGTVINVIMAIMTGGMSLGQTSPCLNAFAGGQAAAYKMFETIKRK 355 (1283)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~t~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~ 355 (1283)
....+...+..++..+..++++++|++++.+|.+|+|.++++..+......|+.++...+..++++..+.+|+.++++.+
T Consensus 374 ~~~~~~~~~~~~i~~~~~~~il~~g~~~v~~g~lt~G~lva~~~l~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~ 453 (710)
T TIGR03796 374 VLTQILGVLPTLLTSLNSALILVVGGLRVMEGQLTIGMLVAFQSLMSSFLEPVNNLVGFGGTLQELEGDLNRLDDVLRNP 453 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 88888777777777788888899999999999999999999999999899999999999999999999999999999876
Q ss_pred CCCCCCCC---C-CCcc-cCccccEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCC
Q 000789 356 PKIDPYDT---S-GITL-EKIEGEIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPD 430 (1283)
Q Consensus 356 ~~~~~~~~---~-~~~~-~~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~ 430 (1283)
++.+.... . ...+ +...+.|+++||+|+|++. ++++|+|+||+|+|||++|||||||||||||+++|+|+|+|+
T Consensus 454 ~e~~~~~~~~~~~~~~~~~~~~~~I~~~~vsf~y~~~-~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~ 532 (710)
T TIGR03796 454 VDPLLEEEEAPAAGSEPSPRLSGYVELRNITFGYSPL-EPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQPW 532 (710)
T ss_pred CccccccccccccccccCCCCCCeEEEEEEEEecCCC-CCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC
Confidence 55322110 0 0111 2345789999999999853 357999999999999999999999999999999999999999
Q ss_pred CceEEECCcccCCCCHHHHhcccEEEccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCC
Q 000789 431 AGEVLIDGIDIKKLQLKWIREKIGLVSQEPILFATSLRENIAYGKENATDQEIRTAIELANAAKFIDKLPKGLDTMAGEH 510 (1283)
Q Consensus 431 ~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~ 510 (1283)
+|+|++||+|+++++.+++|++||||||+|++|++||+|||.++.|++++++++++++.+++++++.++|+|+||.+||+
T Consensus 533 ~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTi~eNi~l~~~~~~~~~i~~al~~~~l~~~i~~lp~gl~t~i~e~ 612 (710)
T TIGR03796 533 SGEILFDGIPREEIPREVLANSVAMVDQDIFLFEGTVRDNLTLWDPTIPDADLVRACKDAAIHDVITSRPGGYDAELAEG 612 (710)
T ss_pred CcEEEECCEeHHHCCHHHHHhheeEEecCChhhhccHHHHhhCCCCCCCHHHHHHHHHHhCCHHHHHhCcCcccceeccC
Confidence 99999999999999999999999999999999999999999999888999999999999999999999999999999999
Q ss_pred CCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhccCEEEEEeCCEEe
Q 000789 511 GTQLSGGQKQRIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMTSRTTVVVAHRLTTIRNADLIAVVHQGKIV 590 (1283)
Q Consensus 511 g~~LSgGqkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~ 590 (1283)
|.+|||||||||+|||||+++|+|||||||||+||+++|+.+.+.|++ .++|+|+||||+++++.||+|++|++|+|+
T Consensus 613 G~~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~--~~~T~IiitHrl~~i~~~D~Iivl~~G~i~ 690 (710)
T TIGR03796 613 GANLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR--RGCTCIIVAHRLSTIRDCDEIIVLERGKVV 690 (710)
T ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh--cCCEEEEEecCHHHHHhCCEEEEEeCCEEE
Confidence 999999999999999999999999999999999999999999999987 589999999999999999999999999999
Q ss_pred EecChhHHhcCCCChhHHHH
Q 000789 591 EKGTHDELIKDPEGPYTQLV 610 (1283)
Q Consensus 591 ~~g~~~~l~~~~~~~~~~~~ 610 (1283)
+.|+|+||+++ ++.|++++
T Consensus 691 ~~G~~~~Ll~~-~~~y~~l~ 709 (710)
T TIGR03796 691 QRGTHEELWAV-GGAYARLI 709 (710)
T ss_pred EecCHHHHHHc-CCcHHHHh
Confidence 99999999987 78898876
No 27
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=3.3e-83 Score=816.45 Aligned_cols=554 Identities=26% Similarity=0.320 Sum_probs=486.4
Q ss_pred cChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 712 KPEFPVLLIGSIAAGIHGVIFPIFGLLLSSSIRMFFEPEDKLRKDSRFWALIYLVLGIINLIAVPFQNYFFGVAGGKLIR 791 (1283)
Q Consensus 712 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~ 791 (1283)
++.++.+...++++++..++....+++...+++......+ ......+.++++++.++..++.+++.++....+.++..
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (686)
T TIGR03797 132 RGARRDLLAILAMGLLGTLLGMLVPIATGILIGTAIPDAD--RSLLVQIALALLAAAVGAAAFQLAQSLAVLRLETRMDA 209 (686)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445555554555555444444455555555554432111 11222344455566677788889999999999999999
Q ss_pred HHHHHHHHHHHcCCccccccCCCChhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Q 000789 792 RIRSLTFEKVVHQEISWFDDPANSSGSVGARLSTDASTIRSLVGDSLALVVQNIATIAAGLIIAFTANWILAFVILAVSP 871 (1283)
Q Consensus 792 ~lr~~~~~~ll~~~~~ff~~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~l~~~p 871 (1283)
++|..+|+++++.|++||++ +++|++++|+. |++.+++++...+...+..++.+++++++++.++|+++++++++.|
T Consensus 210 ~l~~~~~~~ll~~~~~~~~~--~~~g~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~ 286 (686)
T TIGR03797 210 SLQAAVWDRLLRLPVSFFRQ--YSTGDLASRAM-GISQIRRILSGSTLTTLLSGIFALLNLGLMFYYSWKLALVAVALAL 286 (686)
T ss_pred HHHHHHHHHHHcCCHHHHCC--CChhHHHHHHh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999985 88999999997 7999999988888787878887888889999999999999999999
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHhcHHHhHHHHHHHHHHHHHHHH
Q 000789 872 LMLVQGYTQTKFMKGFSADAKLMYEEASQVANDAVGSIRTVASFCSEEKVMDLYEKKCEGPLKNGVRRGILSGAGFGFSF 951 (1283)
Q Consensus 872 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 951 (1283)
++++..++..+..++..++..+...+..+.+.|+++|+++||+++.|+++.++|.+..++..+...+..........+..
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (686)
T TIGR03797 287 VAIAVTLVLGLLQVRKERRLLELSGKISGLTVQLINGISKLRVAGAENRAFARWAKLFSRQRKLELSAQRIENLLTVFNA 366 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98888887777777778888888888999999999999999999999999999999999999998888888888777888
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCcCC
Q 000789 952 LVLYCTNAFCFYIGSVLVEHGKATFGQVFKVFFALTISALGVSQTSAMAPDTTKAKDSAASIFEILDSKPKIDSSKDEGM 1031 (1283)
Q Consensus 952 ~~~~~~~~~~~~~g~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~~ 1031 (1283)
++..+..++++++|.+++..|.+++|.++++..+...+..|+..+...+.++..+..+.+|+.++++.+++.+... .
T Consensus 367 ~i~~~~~~~il~~g~~lv~~g~ltiG~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~~---~ 443 (686)
T TIGR03797 367 VLPVLTSAALFAAAISLLGGAGLSLGSFLAFNTAFGSFSGAVTQLSNTLISILAVIPLWERAKPILEALPEVDEAK---T 443 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCc---C
Confidence 8888888899999999999999999999999999999999999999999999999999999999998765432211 1
Q ss_pred ccCCCcccEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCCh
Q 000789 1032 TLSSVGGAIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKL 1111 (1283)
Q Consensus 1032 ~~~~~~g~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~ 1111 (1283)
.+....+.|+|+||+|+|++. ++++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|++||+|+++++.
T Consensus 444 ~~~~~~~~I~~~nvsf~Y~~~-~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~i~~~~~ 522 (686)
T TIGR03797 444 DPGKLSGAIEVDRVTFRYRPD-GPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPESGSVFYDGQDLAGLDV 522 (686)
T ss_pred CCCCCCceEEEEEEEEEcCCC-CccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcCcCCH
Confidence 112235689999999999754 4579999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcceEEEccCCCCChhhHHHHHhcCCCCCCCHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHH
Q 000789 1112 SWLRQQMGLVSQEPVLFNETIRTNIAYGKQGGATEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIA 1191 (1283)
Q Consensus 1112 ~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiA 1191 (1283)
+++|++|+||||||.+|+|||||||.+++ + ++|+++++|++.++++++|+++|+|+||.+||+|.+|||||||||+||
T Consensus 523 ~~lr~~i~~v~Q~~~lf~gTI~eNi~~~~-~-~~~e~i~~al~~a~l~~~i~~lp~G~dt~ige~G~~LSGGQrQRialA 600 (686)
T TIGR03797 523 QAVRRQLGVVLQNGRLMSGSIFENIAGGA-P-LTLDEAWEAARMAGLAEDIRAMPMGMHTVISEGGGTLSGGQRQRLLIA 600 (686)
T ss_pred HHHHhccEEEccCCccCcccHHHHHhcCC-C-CCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHHHHHHHHH
Confidence 99999999999999999999999999984 3 899999999999999999999999999999999999999999999999
Q ss_pred HHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcCCceEEEEecCchHHhhcCEEEEEeCCEEEEecChHHHHhccCch
Q 000789 1192 RAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALMKITDGA 1271 (1283)
Q Consensus 1192 RAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~~D~I~vl~~G~Ive~Gt~~eLl~~~~g~ 1271 (1283)
||++++|+|||||||||+||++||+.|++.|++. ++|+|+||||+++++.||+|+||++|+|+|.|+|+||+++ +|.
T Consensus 601 RAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~--~~T~IiItHr~~~i~~~D~Iivl~~G~iv~~G~~~~Ll~~-~~~ 677 (686)
T TIGR03797 601 RALVRKPRILLFDEATSALDNRTQAIVSESLERL--KVTRIVIAHRLSTIRNADRIYVLDAGRVVQQGTYDELMAR-EGL 677 (686)
T ss_pred HHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh--CCeEEEEecChHHHHcCCEEEEEECCEEEEECCHHHHHhC-CcH
Confidence 9999999999999999999999999999999986 6899999999999999999999999999999999999996 899
Q ss_pred hHHHHHHh
Q 000789 1272 YASLVALH 1279 (1283)
Q Consensus 1272 y~~L~~~~ 1279 (1283)
|++|++.|
T Consensus 678 y~~l~~~q 685 (686)
T TIGR03797 678 FAQLARRQ 685 (686)
T ss_pred HHHHHHhc
Confidence 99999876
No 28
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=9.1e-83 Score=736.75 Aligned_cols=552 Identities=27% Similarity=0.387 Sum_probs=488.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 56 GTISAIGSGLAHPFMTLIFGHLINSFGSSDRSHVVHEVSKVAVKFLYLAAGTGIAAFLQVSCWMVTGERQATRIRGLYLK 135 (1283)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~~~~ 135 (1283)
..++..+.+++...+.+++..+++.+..... ...+...+..++++.++..++.+.+.....+.+.++...+|+.+++
T Consensus 5 ~~ll~~l~~i~~i~qa~llA~~l~~l~~~~~---~~~l~~~~~~l~~~~~lRa~l~~~~~~~~~~aa~~~~~~LR~~~l~ 81 (559)
T COG4988 5 SALLAVLSGIAIIAQAALLADILTKLIEGQL---FQSLLPLLILLLIALVLRAFLAWLRERLGYRAAAKVRASLRQLVLD 81 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccc---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444555555556666666777666543321 1233444555666677788888999999999999999999999999
Q ss_pred HHHhCChhhHhccCCccHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Q 000789 136 TILRQDIGFFDTETTTGEVIGRMSGDTILIQEAMGEKVGKFIQLMSTFFGGFVVALARGWFLALVLLACLPAIVIAGGSM 215 (1283)
Q Consensus 136 ~ll~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~ 215 (1283)
++.++++.+-.+. ++|+..+.++..++.++.+++..++.++...+..+..++.+|+++|.-++++++++|++.+++..+
T Consensus 82 ~l~~~gp~~~~~~-~~g~~atl~~egve~l~~Y~~ryLPq~~~~~ivp~~i~i~v~~~~w~aalIllit~PlIPlfMilv 160 (559)
T COG4988 82 KLAKLGPAFIAQK-PAGSAATLALEGIEQLEPYYARYLPQMFLSAIVPLLILIAIFFFNWAAALILLITAPLIPLFMILV 160 (559)
T ss_pred HHHhCChhhhcCC-CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999876 999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 216 ALIMSKMSSRGQIAYSEAGTVVEQTVSGIRTVSSFTGEKQAIEKYNNKLQVAYRAAVQQGMVSGIGLGVLMLTVIGTYGL 295 (1283)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (1283)
++..++..+++...+.++++.+-|.++|+.|+|.|+..+...+++.+..++.++..++.-++.-....++.++.+++.++
T Consensus 161 g~~a~~~s~~~~~~~~~ls~~FLD~LrGL~TLr~f~~~~~~~~~i~~~se~fR~~TM~vLriAflSs~vLeffa~lsiAl 240 (559)
T COG4988 161 GLAAKDASEKQFSALARLSGHFLDRLRGLETLRAFGRTEATEERIRKDSEDFRKATMSVLRIAFLSSAVLEFFAYLSIAL 240 (559)
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999998888888888888888777
Q ss_pred HHHH-HHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCCcccCcccc
Q 000789 296 AVWY-GSKLIIEKGYNGGTVINVIMAIMTGGMSLGQTSPCLNAFAGGQAAAYKMFETIKRKPKIDPYDTSGITLEKIEGE 374 (1283)
Q Consensus 296 ~~~~-g~~~v~~~~~t~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~ 374 (1283)
+..+ |..++..|.++....+.++...--.+.|++.++..++.-+.+.++.++++.+++.+++..+.............+
T Consensus 241 vAv~~g~~ll~~G~ltl~~~l~~LiLAPEff~PlR~lGs~fH~~~~g~aa~d~i~~~l~~~~~~~~~~~~~~~~~~~~~e 320 (559)
T COG4988 241 VAVYIGFRLLGEGDLTLFAGLFVLILAPEFFQPLRDLGSFFHAAAAGEAAADKLFTLLESPVATPGSGEKAEVANEPPIE 320 (559)
T ss_pred HHHHHHHHHHccCCccHHHHHHHHHHhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCCCCccccccccCCCce
Confidence 6544 544443378887776666666666688999999999999999999999999998776543322110111122335
Q ss_pred EEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHHhcccE
Q 000789 375 IELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWIREKIG 454 (1283)
Q Consensus 375 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 454 (1283)
++.+|++|.|++.+ ++++|+||+++||+++||||+||||||||+++|+|+++|++|+|.+||+++++++.+.||++++
T Consensus 321 i~~~~l~~~y~~g~--~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~~~G~I~vng~~l~~l~~~~~~k~i~ 398 (559)
T COG4988 321 ISLENLSFRYPDGK--PALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPTQGEIRVNGIDLRDLSPEAWRKQIS 398 (559)
T ss_pred eeecceEEecCCCC--cccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCCCCceEEECCccccccCHHHHHhHee
Confidence 66669999998643 7999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHhcCCCE
Q 000789 455 LVSQEPILFATSLRENIAYGKENATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARAILKNPKI 534 (1283)
Q Consensus 455 ~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARal~~~~~i 534 (1283)
||+|+|++|++||||||++++++++++++.++++.+++.+|+.. |+|+||.+||+|.+|||||+||+++||||++++++
T Consensus 399 ~v~Q~p~lf~gTireNi~l~~~~~s~e~i~~al~~a~l~~~v~~-p~GLdt~ige~G~~LSgGQ~QRlaLARAll~~~~l 477 (559)
T COG4988 399 WVSQNPYLFAGTIRENILLARPDASDEEIIAALDQAGLLEFVPK-PDGLDTVIGEGGAGLSGGQAQRLALARALLSPASL 477 (559)
T ss_pred eeCCCCccccccHHHHhhccCCcCCHHHHHHHHHHhcHHHhhcC-CCcccchhccCCCCCCHHHHHHHHHHHHhcCCCCE
Confidence 99999999999999999999999999999999999999999999 99999999999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhccCEEEEEeCCEEeEecChhHHhcCCCChhHHHHHHhh
Q 000789 535 LLLDEATSALDAESERIVQDALVKIMTSRTTVVVAHRLTTIRNADLIAVVHQGKIVEKGTHDELIKDPEGPYTQLVRLQE 614 (1283)
Q Consensus 535 lllDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~ 614 (1283)
+|||||||+||.+||+.|.+.|.++.+++|+|+||||+..+++||+|+|||+|+++|+|+|++|.++ +|.|++|+..|.
T Consensus 478 ~llDEpTA~LD~etE~~i~~~l~~l~~~ktvl~itHrl~~~~~~D~I~vld~G~l~~~g~~~~L~~~-~~~y~~l~~~q~ 556 (559)
T COG4988 478 LLLDEPTAHLDAETEQIILQALQELAKQKTVLVITHRLEDAADADRIVVLDNGRLVEQGTHEELSEK-QGLYANLLKQQE 556 (559)
T ss_pred EEecCCccCCCHhHHHHHHHHHHHHHhCCeEEEEEcChHHHhcCCEEEEecCCceeccCCHHHHhhc-CcHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999999999999999999987 899999998765
Q ss_pred c
Q 000789 615 G 615 (1283)
Q Consensus 615 ~ 615 (1283)
+
T Consensus 557 ~ 557 (559)
T COG4988 557 G 557 (559)
T ss_pred c
Confidence 4
No 29
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=5e-83 Score=815.80 Aligned_cols=557 Identities=25% Similarity=0.364 Sum_probs=493.7
Q ss_pred hhHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 36 VPFYKLFAFADKQDAVLMIVGTISAIGSGLAHPFMTLIFGHLINSFGSSDRSHVVHEVSKVAVKFLYLAAGTGIAAFLQV 115 (1283)
Q Consensus 36 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (1283)
..+++++++.+++++ .+...++++++..++....|++++.++|.+...... ..+....+.++++.++..++.+++.
T Consensus 133 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~p~~~~~iiD~~~~~~~~---~~l~~~~~~~~~~~~~~~~~~~~~~ 208 (694)
T TIGR03375 133 RPKHWFWSTLKESWP-LYRDVLIASLLINLLALASPLFVMNVYDRVVPNQAF---ETLWVLAIGVALAIVFDFVLKTLRS 208 (694)
T ss_pred ccchHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcH---hHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345566666665543 445556666677777788888999999976432211 1222233334444555677888899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCccHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Q 000789 116 SCWMVTGERQATRIRGLYLKTILRQDIGFFDTETTTGEVIGRMSGDTILIQEAMGEKVGKFIQLMSTFFGGFVVALARGW 195 (1283)
Q Consensus 116 ~~~~~~~~~~~~~lR~~~~~~ll~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 195 (1283)
++..+.+.++..++|.++|+|++++|+.| +++ ++|++++|+ +|++.+++++...+...+..+..+++.++++++++|
T Consensus 209 ~~~~~~~~~~~~~l~~~~~~~ll~l~~~~-~~~-~~G~~~~r~-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 285 (694)
T TIGR03375 209 YFLDVAGKKADLILSAKLFERVLGLRMEA-RPA-SVGSFANQL-REFESVRDFFTSATLTALIDLPFALLFLLVIAIIGG 285 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCccc-CCC-ChhHHHHHH-HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999998 555 899999999 799999999988877778888878888889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 196 FLALVLLACLPAIVIAGGSMALIMSKMSSRGQIAYSEAGTVVEQTVSGIRTVSSFTGEKQAIEKYNNKLQVAYRAAVQQG 275 (1283)
Q Consensus 196 ~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~ 275 (1283)
.+++++++.+|+++++..++.++.++..++.++..++..+.+.|.++|+++||+|+.|+.+.++|.+..++..+...+..
T Consensus 286 ~l~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~ 365 (694)
T TIGR03375 286 PLVWVPLVAIPLILLPGLLLQRPLSRLAEESMRESAQRNAVLVESLSGLETIKALNAEGRFQRRWEQTVAALARSGLKSR 365 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccccHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Q 000789 276 MVSGIGLGVLMLTVIGTYGLAVWYGSKLIIEKGYNGGTVINVIMAIMTGGMSLGQTSPCLNAFAGGQAAAYKMFETIKRK 355 (1283)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~t~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~ 355 (1283)
........+..++..++.++++++|++++.+|.+|+|.+++++.+......|+..+...+..++.+..+.+|+.++++.+
T Consensus 366 ~~~~~~~~~~~~~~~~~~~~il~~g~~~v~~g~ls~G~l~a~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~ 445 (694)
T TIGR03375 366 FLSNLATNFAQFIQQLVSVAIVVVGVYLISDGELTMGGLIACVMLSGRALAPLGQLAGLLTRYQQAKTALQSLDELMQLP 445 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 88888888887877788888899999999999999999999999999999999999999999999999999999999876
Q ss_pred CCCCCCCCCCCcccCccccEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEE
Q 000789 356 PKIDPYDTSGITLEKIEGEIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVL 435 (1283)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~ 435 (1283)
++.++.. .....+...+.|+|+||+|+|++. ++++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|.
T Consensus 446 ~e~~~~~-~~~~~~~~~~~I~~~~vsf~Y~~~-~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p~~G~I~ 523 (694)
T TIGR03375 446 VERPEGT-RFLHRPRLQGEIEFRNVSFAYPGQ-ETPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQPTEGSVL 523 (694)
T ss_pred CCCCCCC-CCCCCCCccceEEEEEEEEEeCCC-CccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEE
Confidence 6533211 111122345689999999999753 35799999999999999999999999999999999999999999999
Q ss_pred ECCcccCCCCHHHHhcccEEEccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCC
Q 000789 436 IDGIDIKKLQLKWIREKIGLVSQEPILFATSLRENIAYGKENATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLS 515 (1283)
Q Consensus 436 ~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LS 515 (1283)
+||+|+++++.+++|++|+||||+|++|++||+|||.+++|++++++++++++.++++++++++|+||||.+||+|.+||
T Consensus 524 idg~~l~~~~~~~lr~~i~~v~Q~~~lf~~TI~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~T~i~e~G~~LS 603 (694)
T TIGR03375 524 LDGVDIRQIDPADLRRNIGYVPQDPRLFYGTLRDNIALGAPYADDEEILRAAELAGVTEFVRRHPDGLDMQIGERGRSLS 603 (694)
T ss_pred ECCEEhhhCCHHHHHhccEEECCChhhhhhhHHHHHhCCCCCCCHHHHHHHHHHcChHHHHHhCcccccceecCCCCCCC
Confidence 99999999999999999999999999999999999999999899999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhccCEEEEEeCCEEeEecCh
Q 000789 516 GGQKQRIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMTSRTTVVVAHRLTTIRNADLIAVVHQGKIVEKGTH 595 (1283)
Q Consensus 516 gGqkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~ 595 (1283)
|||||||+|||||+++|+|||||||||+||+++|+.+++.|.++.+++|+|+||||+++++.||+|++|++|+|+|+|+|
T Consensus 604 gGQrQRlalARall~~p~iliLDE~Ts~LD~~te~~i~~~l~~~~~~~T~iiItHrl~~~~~~D~iivl~~G~i~e~G~~ 683 (694)
T TIGR03375 604 GGQRQAVALARALLRDPPILLLDEPTSAMDNRSEERFKDRLKRWLAGKTLVLVTHRTSLLDLVDRIIVMDNGRIVADGPK 683 (694)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhCCEEEEEeCCEEEeeCCH
Confidence 99999999999999999999999999999999999999999999889999999999999999999999999999999999
Q ss_pred hHHhcC
Q 000789 596 DELIKD 601 (1283)
Q Consensus 596 ~~l~~~ 601 (1283)
+||+++
T Consensus 684 ~eLl~~ 689 (694)
T TIGR03375 684 DQVLEA 689 (694)
T ss_pred HHHHHH
Confidence 999865
No 30
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=4.7e-83 Score=817.83 Aligned_cols=564 Identities=26% Similarity=0.366 Sum_probs=491.9
Q ss_pred HHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 704 MRRLAYLNKPEFPVLLIGSIAAGIHGVIFPIFGLLLSSSIRMFFEPEDKLRKDSRFWALIYLVLGIINLIAVPFQNYFFG 783 (1283)
Q Consensus 704 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~ 783 (1283)
+++++.+.++.++.+...++++++..++....++++..+++...... .......+..+++++.++..++.+++.++..
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iiD~v~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (708)
T TIGR01193 144 LLKFIPLITRQKKLIVNIVIAAIIVTLISIAGSYYLQKIIDTYIPHK--MMGTLGIISIGLIIAYIIQQILSYIQIFLLN 221 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC--ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455555556666655555555555555555666666665543211 1111222334445556667788888999999
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCccccccCCCChhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Q 000789 784 VAGGKLIRRIRSLTFEKVVHQEISWFDDPANSSGSVGARLSTDASTIRSLVGDSLALVVQNIATIAAGLIIAFTANWILA 863 (1283)
Q Consensus 784 ~~~~~~~~~lr~~~~~~ll~~~~~ff~~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~ 863 (1283)
..+.++..++|.++|+++++.|+.||++ +++|++++|++ |.+.+.+.+...+..++..++.+++.+++++.++|+++
T Consensus 222 ~~~~~~~~~l~~~~~~~ll~l~~~~f~~--~~~G~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 298 (708)
T TIGR01193 222 VLGQRLSIDIILSYIKHLFELPMSFFST--RRTGEIVSRFT-DASSIIDALASTILSLFLDMWILVIVGLFLVRQNMLLF 298 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHhCC--CchhHHHHHhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 9999999999999999999999999985 89999999998 89999998888887778888888888888999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHhcHHHhHHHHHHHH
Q 000789 864 FVILAVSPLMLVQGYTQTKFMKGFSADAKLMYEEASQVANDAVGSIRTVASFCSEEKVMDLYEKKCEGPLKNGVRRGILS 943 (1283)
Q Consensus 864 lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 943 (1283)
+++++++|++++..++..+..++..++..+...+..+.+.|++.|+++||+++.|+.+.++|.+...+..+...+.....
T Consensus 299 li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (708)
T TIGR01193 299 LLSLLSIPVYAVIIILFKRTFNKLNHDAMQANAVLNSSIIEDLNGIETIKSLTSEAERYSKIDSEFGDYLNKSFKYQKAD 378 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999888888888888888888889999999999999999999999999999999999999988888887777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCC
Q 000789 944 GAGFGFSFLVLYCTNAFCFYIGSVLVEHGKATFGQVFKVFFALTISALGVSQTSAMAPDTTKAKDSAASIFEILDSKPKI 1023 (1283)
Q Consensus 944 ~~~~~~~~~~~~~~~~~~~~~g~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~ 1023 (1283)
.....+..++..+..++++++|++++..|.+++|.++++..+...+..|+..+...+..+..+..+.+|+.++++.+++.
T Consensus 379 ~~~~~~~~~~~~~~~i~il~~g~~lv~~g~ls~G~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~ 458 (708)
T TIGR01193 379 QGQQAIKAVTKLILNVVILWTGAYLVMRGKLTLGQLITFNALLSYFLTPLENIINLQPKLQAARVANNRLNEVYLVDSEF 458 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcc
Confidence 77777777777788888999999999999999999999999999999999999999999999999999999999876554
Q ss_pred CCCCCcCCccCCCcccEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECC
Q 000789 1024 DSSKDEGMTLSSVGGAIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDN 1103 (1283)
Q Consensus 1024 ~~~~~~~~~~~~~~g~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG 1103 (1283)
+.... ..+.+...+.|+|+||+|+|++ ++++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|++||
T Consensus 459 ~~~~~-~~~~~~~~~~I~~~~vsf~y~~--~~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p~~G~I~idg 535 (708)
T TIGR01193 459 INKKK-RTELNNLNGDIVINDVSYSYGY--GSNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQARSGEILLNG 535 (708)
T ss_pred ccccc-ccCCCCCCCcEEEEEEEEEcCC--CCcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCCcEEEECC
Confidence 32211 0112234578999999999974 35799999999999999999999999999999999999999999999999
Q ss_pred ccCCCCChHHHhcceEEEccCCCCChhhHHHHHhcCCCCCCCHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChh
Q 000789 1104 IELPKFKLSWLRQQMGLVSQEPVLFNETIRTNIAYGKQGGATEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGG 1183 (1283)
Q Consensus 1104 ~di~~~~~~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgG 1183 (1283)
+|+++++.+++|++|+||||||+||+|||||||.++..++++|+++++|++.++++++|+++|+||||.+||+|.+||||
T Consensus 536 ~~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~l~~~~~~~~~~i~~a~~~a~l~~~i~~lp~gldt~i~e~G~~LSgG 615 (708)
T TIGR01193 536 FSLKDIDRHTLRQFINYLPQEPYIFSGSILENLLLGAKENVSQDEIWAACEIAEIKDDIENMPLGYQTELSEEGSSISGG 615 (708)
T ss_pred EEHHHcCHHHHHHheEEEecCceehhHHHHHHHhccCCCCCCHHHHHHHHHHhCCHHHHHhcccccCcEecCCCCCCCHH
Confidence 99999999999999999999999999999999999843578999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcCCceEEEEecCchHHhhcCEEEEEeCCEEEEecChHH
Q 000789 1184 QKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDA 1263 (1283)
Q Consensus 1184 QrQRlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~~D~I~vl~~G~Ive~Gt~~e 1263 (1283)
|||||+||||++++|+|||||||||+||++||+.|++.|++. +++|+|+||||+++++.||+|+||++|+++|.|+|+|
T Consensus 616 QrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~-~~~T~IiitHr~~~~~~~D~i~~l~~G~i~~~G~~~~ 694 (708)
T TIGR01193 616 QKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNL-QDKTIIFVAHRLSVAKQSDKIIVLDHGKIIEQGSHDE 694 (708)
T ss_pred HHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh-cCCEEEEEecchHHHHcCCEEEEEECCEEEEECCHHH
Confidence 999999999999999999999999999999999999999985 7899999999999999999999999999999999999
Q ss_pred HHhccCchhHHHHH
Q 000789 1264 LMKITDGAYASLVA 1277 (1283)
Q Consensus 1264 Ll~~~~g~y~~L~~ 1277 (1283)
|+++ +|.|++|++
T Consensus 695 L~~~-~~~y~~l~~ 707 (708)
T TIGR01193 695 LLDR-NGFYASLIH 707 (708)
T ss_pred HHhc-CCcHHHHhh
Confidence 9996 899999986
No 31
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=4.7e-82 Score=793.78 Aligned_cols=567 Identities=31% Similarity=0.495 Sum_probs=498.8
Q ss_pred hHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 37 PFYKLFAFADKQDAVLMIVGTISAIGSGLAHPFMTLIFGHLINSFGSSDRSHVVHEVSKVAVKFLYLAAGTGIAAFLQVS 116 (1283)
Q Consensus 37 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (1283)
.+++++++.+++++. ++..+++.++..++....|++++.++|.....+.. ..+....+.++++.++..++.++..+
T Consensus 12 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~~~~ 87 (582)
T PRK11176 12 TFRRLWPTIAPFKAG-LIVAGVALILNAASDTFMLSLLKPLLDDGFGKADR---SVLKWMPLVVIGLMILRGITSFISSY 87 (582)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCch---hHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 355667777665443 44555666666666677788889899876432211 11112222333445566677788888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCccHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Q 000789 117 CWMVTGERQATRIRGLYLKTILRQDIGFFDTETTTGEVIGRMSGDTILIQEAMGEKVGKFIQLMSTFFGGFVVALARGWF 196 (1283)
Q Consensus 117 ~~~~~~~~~~~~lR~~~~~~ll~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 196 (1283)
+..+.+.++..++|..+++++++.|+++|++. ++|++++|+++|++.+++.+...+..++..++.+++.++++++++|.
T Consensus 88 ~~~~~~~~~~~~lr~~~~~~l~~~~~~~~~~~-~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 166 (582)
T PRK11176 88 CISWVSGKVVMTMRRRLFGHMMGMPVSFFDKQ-STGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQ 166 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCC-CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88889999999999999999999999999876 99999999999999999999998999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 197 LALVLLACLPAIVIAGGSMALIMSKMSSRGQIAYSEAGTVVEQTVSGIRTVSSFTGEKQAIEKYNNKLQVAYRAAVQQGM 276 (1283)
Q Consensus 197 l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 276 (1283)
+++++++++|+.+++..++.++.++..++.++..++.++.+.|.++|+++||+|+.|+.+.++|++..++..+...+..+
T Consensus 167 l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (582)
T PRK11176 167 LSLILIVIAPIVSIAIRVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNRMRQQGMKMVS 246 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998888888999999999999999999999999999999999999999999999999999999999888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC
Q 000789 277 VSGIGLGVLMLTVIGTYGLAVWYGSKLIIEKGYNGGTVINVIMAIMTGGMSLGQTSPCLNAFAGGQAAAYKMFETIKRKP 356 (1283)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~t~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~ 356 (1283)
...+...+..++..+..++++++|++.+..|.+++|.+++++.++.....|+..+...+..++++..+.+|+.++++.++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~i~~~g~~~~~~g~is~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~~~~~~ 326 (582)
T PRK11176 247 ASSISDPIIQLIASLALAFVLYAASFPSVMDTLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDLEQ 326 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 88877777777777777788899999999999999999999888888889999999999999999999999999998654
Q ss_pred CCCCCCCCCCcccCccccEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEE
Q 000789 357 KIDPYDTSGITLEKIEGEIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLI 436 (1283)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~ 436 (1283)
+.+... ...++..+.|+++||+|+|++. ++++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|++
T Consensus 327 ~~~~~~---~~~~~~~~~i~~~~vsf~y~~~-~~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p~~G~I~i 402 (582)
T PRK11176 327 EKDEGK---RVIERAKGDIEFRNVTFTYPGK-EVPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDIDEGEILL 402 (582)
T ss_pred cCCCCC---cCCCCCCCeEEEEEEEEecCCC-CCccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCCCCceEEE
Confidence 422111 1122234579999999999753 357999999999999999999999999999999999999999999999
Q ss_pred CCcccCCCCHHHHhcccEEEccCCCCCcccHHHHHhcCCCC-CCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCC
Q 000789 437 DGIDIKKLQLKWIREKIGLVSQEPILFATSLRENIAYGKEN-ATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLS 515 (1283)
Q Consensus 437 ~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~-~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LS 515 (1283)
||+|+++++.+++|++|+||||||++|++||+|||.+|+++ .++++++++++.++++++++++|+|+||.+||+|.+||
T Consensus 403 ~g~~i~~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~al~~~~l~~~i~~lp~Gldt~ig~~g~~LS 482 (582)
T PRK11176 403 DGHDLRDYTLASLRNQVALVSQNVHLFNDTIANNIAYARTEQYSREQIEEAARMAYAMDFINKMDNGLDTVIGENGVLLS 482 (582)
T ss_pred CCEEhhhcCHHHHHhhceEEccCceeecchHHHHHhcCCCCCCCHHHHHHHHHHhCcHHHHHhcccccCceeCCCCCcCC
Confidence 99999999999999999999999999999999999999764 68999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhccCEEEEEeCCEEeEecCh
Q 000789 516 GGQKQRIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMTSRTTVVVAHRLTTIRNADLIAVVHQGKIVEKGTH 595 (1283)
Q Consensus 516 gGqkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~ 595 (1283)
|||||||+|||||+++|+|||||||||+||+++++.+.+.|.++.+++|+|+||||++.++.||+|++|++|+|+|.|+|
T Consensus 483 GGqrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~~~~tvI~VtHr~~~~~~~D~Ii~l~~g~i~e~g~~ 562 (582)
T PRK11176 483 GGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEKADEILVVEDGEIVERGTH 562 (582)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEeCCH
Confidence 99999999999999999999999999999999999999999998888999999999999999999999999999999999
Q ss_pred hHHhcCCCChhHHHHHHh
Q 000789 596 DELIKDPEGPYTQLVRLQ 613 (1283)
Q Consensus 596 ~~l~~~~~~~~~~~~~~~ 613 (1283)
++|+++ ++.|++++..|
T Consensus 563 ~~l~~~-~~~y~~l~~~~ 579 (582)
T PRK11176 563 AELLAQ-NGVYAQLHKMQ 579 (582)
T ss_pred HHHHhC-CChHHHHHHHH
Confidence 999987 78999998755
No 32
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=2.2e-82 Score=812.73 Aligned_cols=562 Identities=23% Similarity=0.337 Sum_probs=485.8
Q ss_pred HHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 705 RRLAYLNKPEFPVLLIGSIAAGIHGVIFPIFGLLLSSSIRMFFEPEDKLRKDSRFWALIYLVLGIINLIAVPFQNYFFGV 784 (1283)
Q Consensus 705 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~ 784 (1283)
++++.+.++.++.+...++++++..++....+++...+++......+ ......+..+++++.++..++.+++.++...
T Consensus 143 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (710)
T TIGR03796 143 RALWRRLRGSRGALLYLLLAGLLLVLPGLVIPAFSQIFVDEILVQGR--QDWLRPLLLGMGLTALLQGVLTWLQLYYLRR 220 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444555444444444444333333444444444443322111 1112223444555566777888899999999
Q ss_pred HHHHHHHHHHHHHHHHHHcCCccccccCCCChhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Q 000789 785 AGGKLIRRIRSLTFEKVVHQEISWFDDPANSSGSVGARLSTDASTIRSLVGDSLALVVQNIATIAAGLIIAFTANWILAF 864 (1283)
Q Consensus 785 ~~~~~~~~lr~~~~~~ll~~~~~ff~~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~l 864 (1283)
.+.++..++|..+|+++++.|++||++ +++|++++|+..| +.+++++...+..++..++.+++.+++++.++|++++
T Consensus 221 ~~~~~~~~l~~~~~~~ll~l~~~~~~~--~~~g~~~~r~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l 297 (710)
T TIGR03796 221 LQIKLAVGMSARFLWHILRLPVRFFAQ--RHAGDIASRVQLN-DQVAEFLSGQLATTALDAVMLVFYALLMLLYDPVLTL 297 (710)
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHcC--CcccHHHHHhhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999985 8999999999988 6899999888888899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHhcHHHhHHHHHHHHH
Q 000789 865 VILAVSPLMLVQGYTQTKFMKGFSADAKLMYEEASQVANDAVGSIRTVASFCSEEKVMDLYEKKCEGPLKNGVRRGILSG 944 (1283)
Q Consensus 865 v~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 944 (1283)
++++++|++++..++..+..++..++..+...+..+.+.|++.|+++||+++.|+.+.++|.+...+..+...+......
T Consensus 298 i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (710)
T TIGR03796 298 IGIAFAAINVLALQLVSRRRVDANRRLQQDAGKLTGVAISGLQSIETLKASGLESDFFSRWAGYQAKLLNAQQELGVLTQ 377 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999988888888777777778888888889999999999999999999999999999999999888888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCC
Q 000789 945 AGFGFSFLVLYCTNAFCFYIGSVLVEHGKATFGQVFKVFFALTISALGVSQTSAMAPDTTKAKDSAASIFEILDSKPKID 1024 (1283)
Q Consensus 945 ~~~~~~~~~~~~~~~~~~~~g~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~ 1024 (1283)
....+..++..+..++++++|++++..|.+++|.++++..+...+..|+..+...+.++..+..+.+|+.++++.+++..
T Consensus 378 ~~~~~~~~i~~~~~~~il~~g~~~v~~g~lt~G~lva~~~l~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~ 457 (710)
T TIGR03796 378 ILGVLPTLLTSLNSALILVVGGLRVMEGQLTIGMLVAFQSLMSSFLEPVNNLVGFGGTLQELEGDLNRLDDVLRNPVDPL 457 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccc
Confidence 77788888888888899999999999999999999999999999999999999999999999999999999998765543
Q ss_pred CCCC---c-CCcc-CCCcccEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceE
Q 000789 1025 SSKD---E-GMTL-SSVGGAIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHV 1099 (1283)
Q Consensus 1025 ~~~~---~-~~~~-~~~~g~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I 1099 (1283)
.... . ...+ +...+.|+|+||+|+|++. ++++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|
T Consensus 458 ~~~~~~~~~~~~~~~~~~~~I~~~~vsf~y~~~-~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I 536 (710)
T TIGR03796 458 LEEEEAPAAGSEPSPRLSGYVELRNITFGYSPL-EPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQPWSGEI 536 (710)
T ss_pred cccccccccccccCCCCCCeEEEEEEEEecCCC-CCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEE
Confidence 2210 0 0111 2345789999999999854 4579999999999999999999999999999999999999999999
Q ss_pred EECCccCCCCChHHHhcceEEEccCCCCChhhHHHHHhcCCCCCCCHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCC
Q 000789 1100 LLDNIELPKFKLSWLRQQMGLVSQEPVLFNETIRTNIAYGKQGGATEEEIIAATEASNAHNFISALPHGYETNVGERGVQ 1179 (1283)
Q Consensus 1100 ~idG~di~~~~~~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~ 1179 (1283)
++||+|+++++.+++|++|+||||||.+|+|||||||.++. ++++|+++++|++.++++++|.++|+||||.+||+|.+
T Consensus 537 ~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTi~eNi~l~~-~~~~~~~i~~al~~~~l~~~i~~lp~gl~t~i~e~G~~ 615 (710)
T TIGR03796 537 LFDGIPREEIPREVLANSVAMVDQDIFLFEGTVRDNLTLWD-PTIPDADLVRACKDAAIHDVITSRPGGYDAELAEGGAN 615 (710)
T ss_pred EECCEeHHHCCHHHHHhheeEEecCChhhhccHHHHhhCCC-CCCCHHHHHHHHHHhCCHHHHHhCcCcccceeccCCCC
Confidence 99999999999999999999999999999999999999984 46899999999999999999999999999999999999
Q ss_pred CChhHHHHHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcCCceEEEEecCchHHhhcCEEEEEeCCEEEEec
Q 000789 1180 LSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQG 1259 (1283)
Q Consensus 1180 LSgGQrQRlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~~D~I~vl~~G~Ive~G 1259 (1283)
||||||||||||||++++|+|||||||||+||++||+.|.+.|++ .++|+|+||||+++++.||+|+||++|+|+|.|
T Consensus 616 LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~--~~~T~IiitHrl~~i~~~D~Iivl~~G~i~~~G 693 (710)
T TIGR03796 616 LSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR--RGCTCIIVAHRLSTIRDCDEIIVLERGKVVQRG 693 (710)
T ss_pred CCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh--cCCEEEEEecCHHHHHhCCEEEEEeCCEEEEec
Confidence 999999999999999999999999999999999999999999987 489999999999999999999999999999999
Q ss_pred ChHHHHhccCchhHHHH
Q 000789 1260 SHDALMKITDGAYASLV 1276 (1283)
Q Consensus 1260 t~~eLl~~~~g~y~~L~ 1276 (1283)
+|+||+++ +|.|++|+
T Consensus 694 ~~~~Ll~~-~~~y~~l~ 709 (710)
T TIGR03796 694 THEELWAV-GGAYARLI 709 (710)
T ss_pred CHHHHHHc-CCcHHHHh
Confidence 99999996 89999987
No 33
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=8.4e-82 Score=784.95 Aligned_cols=564 Identities=24% Similarity=0.303 Sum_probs=480.3
Q ss_pred HHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchh--hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 706 RLAYLNKPEFPVLLIGSIAAGIHGVIFPIFGLLLSSSIRMFFEPEDK--LRKDSRFWALIYLVLGIINLIAVPFQNYFFG 783 (1283)
Q Consensus 706 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~ 783 (1283)
+++++.++.++.+.+++++..+..++.....++++..++........ .......+...+.++.++..++.+++.++.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (574)
T PRK11160 6 PFLKLYKRHWFMLSLGILLAIVTLLASIGLLTLSGWFLSASAVAGLAGLYSFNYMLPAAGVRGAAIGRTAGRYGERLVSH 85 (574)
T ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455566667677776666666655555555555555543211110 0000111222344556677788888999999
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCccccccCCCChhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Q 000789 784 VAGGKLIRRIRSLTFEKVVHQEISWFDDPANSSGSVGARLSTDASTIRSLVGDSLALVVQNIATIAAGLIIAFTANWILA 863 (1283)
Q Consensus 784 ~~~~~~~~~lr~~~~~~ll~~~~~ff~~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~ 863 (1283)
..+.++..++|.++|+++++.|+.||++ +++|++++|+++|++.++.++...+..++..++.+++++++++.++|+++
T Consensus 86 ~~~~~~~~~lR~~l~~~l~~~~~~~~~~--~~~g~~~srl~~Dv~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 163 (574)
T PRK11160 86 DATFRVLTHLRVFTFSKLLPLSPAGLAR--YRQGDLLNRLVADVDTLDHLYLRLISPLVAALVVILVLTIGLSFFDLTLA 163 (574)
T ss_pred HHHHHHHHHHHHHHHHHhhccChHhhcc--CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999995 78999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHH-HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHhcHHHhHHHHHHH
Q 000789 864 FVILAVSPLMLV-QGYTQTKFMKGFSADAKLMYEEASQVANDAVGSIRTVASFCSEEKVMDLYEKKCEGPLKNGVRRGIL 942 (1283)
Q Consensus 864 lv~l~~~pl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 942 (1283)
+++++++|++.+ ..++..+..+...++.++...+..+.+.|.++|+++||+|+.++.+.++|.+..++..+...+....
T Consensus 164 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 243 (574)
T PRK11160 164 LTLGGILLLLLLLLPLLFYRLGKKPGQDLTHLRAQYRVQLTEWLQGQAELTLFGAEDRYRQQLEQTEQQWLAAQRRQANL 243 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCCHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 998887777654 3455566666677778888889999999999999999999999999999999999999988888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC
Q 000789 943 SGAGFGFSFLVLYCTNAFCFYIGSVLVEHGKATFGQVFKVFFALTI-SALGVSQTSAMAPDTTKAKDSAASIFEILDSKP 1021 (1283)
Q Consensus 943 ~~~~~~~~~~~~~~~~~~~~~~g~~l~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~ 1021 (1283)
.+....+..++..+..++++++|.+++ .|.++.|.+++++.+... ...++..+......+.++..+.+|+.++++.++
T Consensus 244 ~~~~~~~~~~~~~~~~~~i~~~g~~~~-~g~~t~g~l~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~ri~~ll~~~~ 322 (574)
T PRK11160 244 TGLSQALMILANGLTVVLMLWLAAGGV-GGNAQPGALIALFVFAALAAFEALMPVAGAFQHLGQVIASARRINEITEQKP 322 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh-ccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 877777777777777788889998884 788999998887665433 345777778888899999999999999998766
Q ss_pred CCCCCCCcCCccCCCcccEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEE
Q 000789 1022 KIDSSKDEGMTLSSVGGAIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLL 1101 (1283)
Q Consensus 1022 ~~~~~~~~~~~~~~~~g~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~i 1101 (1283)
+.+..... ..+...+.|+|+||+|+|++. +.++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|++
T Consensus 323 ~~~~~~~~--~~~~~~~~i~~~~v~f~y~~~-~~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~p~~G~I~i 399 (574)
T PRK11160 323 EVTFPTTS--TAAADQVSLTLNNVSFTYPDQ-PQPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWDPQQGEILL 399 (574)
T ss_pred CCCCCccc--CCCCCCCeEEEEEEEEECCCC-CCcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEE
Confidence 53221111 112234679999999999853 346999999999999999999999999999999999999999999999
Q ss_pred CCccCCCCChHHHhcceEEEccCCCCChhhHHHHHhcCCCCCCCHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCC
Q 000789 1102 DNIELPKFKLSWLRQQMGLVSQEPVLFNETIRTNIAYGKQGGATEEEIIAATEASNAHNFISALPHGYETNVGERGVQLS 1181 (1283)
Q Consensus 1102 dG~di~~~~~~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LS 1181 (1283)
||+|+++++.+++|++|+||||||++|++||+|||.++. ++++|++++++++.+++++++++ |+||||.+||+|.+||
T Consensus 400 ~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~~~-~~~~~~~i~~al~~~~l~~~i~~-p~GldT~vge~g~~LS 477 (574)
T PRK11160 400 NGQPIADYSEAALRQAISVVSQRVHLFSATLRDNLLLAA-PNASDEALIEVLQQVGLEKLLED-DKGLNAWLGEGGRQLS 477 (574)
T ss_pred CCEEhhhCCHHHHHhheeEEcccchhhcccHHHHhhcCC-CccCHHHHHHHHHHcCCHHHHcC-ccccCchhcCCCCCCC
Confidence 999999999999999999999999999999999999984 46899999999999999999999 9999999999999999
Q ss_pred hhHHHHHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcCCceEEEEecCchHHhhcCEEEEEeCCEEEEecCh
Q 000789 1182 GGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSH 1261 (1283)
Q Consensus 1182 gGQrQRlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~~D~I~vl~~G~Ive~Gt~ 1261 (1283)
||||||||||||++++|+|||||||||+||++||+.|++.|++..+++|+|+||||++++..||+|++|++|+++|.|+|
T Consensus 478 gGqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~~~~tviiitHr~~~~~~~d~i~~l~~G~i~~~g~~ 557 (574)
T PRK11160 478 GGEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHAQNKTVLMITHRLTGLEQFDRICVMDNGQIIEQGTH 557 (574)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEecChhHHHhCCEEEEEeCCeEEEeCCH
Confidence 99999999999999999999999999999999999999999998889999999999999999999999999999999999
Q ss_pred HHHHhccCchhHHHHHH
Q 000789 1262 DALMKITDGAYASLVAL 1278 (1283)
Q Consensus 1262 ~eLl~~~~g~y~~L~~~ 1278 (1283)
+||+++ +|.|++||+.
T Consensus 558 ~~l~~~-~g~y~~l~~~ 573 (574)
T PRK11160 558 QELLAQ-QGRYYQLKQR 573 (574)
T ss_pred HHHHhc-CcHHHHHHhh
Confidence 999996 9999999864
No 34
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=2.6e-81 Score=799.16 Aligned_cols=567 Identities=26% Similarity=0.401 Sum_probs=502.3
Q ss_pred hHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 37 PFYKLFAFADKQDAVLMIVGTISAIGSGLAHPFMTLIFGHLINSFGSSDRSHVVHEVSKVAVKFLYLAAGTGIAAFLQVS 116 (1283)
Q Consensus 37 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (1283)
.+.+++++.+++++ .+...++++++..++....|++++.++|.+..... ...+...++.++++.++..++.+++.+
T Consensus 126 ~~~~~~~~~~~~~~-~~~~~~~~s~~~~ll~l~~p~~~~~iid~v~~~~~---~~~l~~l~~~~~~~~~~~~~~~~l~~~ 201 (694)
T TIGR01846 126 GFSWFIPAIIRYRK-QFREVLLISLALQLFALVTPLLFQVVIDKVLVHRG---LSTLSVLALAMLAVAIFEPALGGLRTY 201 (694)
T ss_pred cHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC---hhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46666666665543 34455666666666777788899999998653221 122233344445555667788899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCccHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Q 000789 117 CWMVTGERQATRIRGLYLKTILRQDIGFFDTETTTGEVIGRMSGDTILIQEAMGEKVGKFIQLMSTFFGGFVVALARGWF 196 (1283)
Q Consensus 117 ~~~~~~~~~~~~lR~~~~~~ll~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 196 (1283)
+....+.++..++|.++|+|++++|+.+|++. ++|++++|+ +|++.+++++...+..++..+..+++.++++++++|.
T Consensus 202 ~~~~~~~~~~~~l~~~~~~~l~~l~~~~f~~~-~~g~~~~rl-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 279 (694)
T TIGR01846 202 LFAHLTSRIDVELGARLYRHLLGLPLGYFESR-RVGDTVARV-RELEQIRNFLTGSALTVVLDLLFVVVFLAVMFFYSPT 279 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCHHHcCCC-CHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999986 999999999 6999999998887777777777677778889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 197 LALVLLACLPAIVIAGGSMALIMSKMSSRGQIAYSEAGTVVEQTVSGIRTVSSFTGEKQAIEKYNNKLQVAYRAAVQQGM 276 (1283)
Q Consensus 197 l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 276 (1283)
+++++++++|+++++..++.++.++..++.++..++.++.+.|.++|+++||+||.|+.+.++|.+..++..+...+..+
T Consensus 280 l~li~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 359 (694)
T TIGR01846 280 LTGVVIGSLVCYALLSVFVGPILRKRVEDKFERSAAATSFLVESVTGIETIKATATEPQFQNRWDRQLAAYVAASFRVTN 359 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcccCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999888999998888888899999999999999999999999999999999999999999999988888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC
Q 000789 277 VSGIGLGVLMLTVIGTYGLAVWYGSKLIIEKGYNGGTVINVIMAIMTGGMSLGQTSPCLNAFAGGQAAAYKMFETIKRKP 356 (1283)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~t~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~ 356 (1283)
..+....+..++..+..++++|+|++++.+|.+|+|.++++.++......|+..+...+..++++..+.+|+.++++.++
T Consensus 360 ~~~~~~~~~~~i~~~~~~~il~~g~~lv~~g~it~G~lia~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~ 439 (694)
T TIGR01846 360 LGNIAGQAIELIQKLTFAILLWFGAHLVIGGALSPGQLVAFNMLAGRVTQPVLRLAQLWQDFQQTGIALERLGDILNSPT 439 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 88888887778888888888999999999999999999999999988999999999999999999999999999998765
Q ss_pred CCCCCCCCCCcccCccccEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEE
Q 000789 357 KIDPYDTSGITLEKIEGEIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLI 436 (1283)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~ 436 (1283)
+.+... ....+...+.|+++||+|+|++. ++++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|++
T Consensus 440 e~~~~~--~~~~~~~~~~i~~~~vsf~y~~~-~~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~p~~G~I~i 516 (694)
T TIGR01846 440 EPRSAG--LAALPELRGAITFENIRFRYAPD-SPEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTPQHGQVLV 516 (694)
T ss_pred CccCCC--CCCCCCCCCeEEEEEEEEEcCCC-CccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEE
Confidence 532211 11122345789999999999743 346999999999999999999999999999999999999999999999
Q ss_pred CCcccCCCCHHHHhcccEEEccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCCh
Q 000789 437 DGIDIKKLQLKWIREKIGLVSQEPILFATSLRENIAYGKENATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSG 516 (1283)
Q Consensus 437 ~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSg 516 (1283)
||+|+++++.+++|++|+||+|++++|++||+|||.++.|+.++++++++|+.++++++++++|+|+||.+|++|.+|||
T Consensus 517 dg~~i~~~~~~~~r~~i~~v~q~~~lf~~ti~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~t~i~~~g~~LSg 596 (694)
T TIGR01846 517 DGVDLAIADPAWLRRQMGVVLQENVLFSRSIRDNIALCNPGAPFEHVIHAAKLAGAHDFISELPQGYNTEVGEKGANLSG 596 (694)
T ss_pred CCEehhhCCHHHHHHhCeEEccCCeehhhhHHHHHhcCCCCCCHHHHHHHHHHcChHHHHHhCcCccCcEecCCCCCCCH
Confidence 99999999999999999999999999999999999999988999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhccCEEEEEeCCEEeEecChh
Q 000789 517 GQKQRIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMTSRTTVVVAHRLTTIRNADLIAVVHQGKIVEKGTHD 596 (1283)
Q Consensus 517 GqkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~~ 596 (1283)
|||||++|||||+++|+|||||||||+||+++++.+.+.|+++.+++|+|+||||+++++.||+|++|++|+|++.|+|+
T Consensus 597 Gq~qri~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~ii~l~~G~i~~~g~~~ 676 (694)
T TIGR01846 597 GQRQRIAIARALVGNPRILIFDEATSALDYESEALIMRNMREICRGRTVIIIAHRLSTVRACDRIIVLEKGQIAESGRHE 676 (694)
T ss_pred HHHHHHHHHHHHHhCCCEEEEECCCcCCCHHHHHHHHHHHHHHhCCCEEEEEeCChHHHHhCCEEEEEeCCEEEEeCCHH
Confidence 99999999999999999999999999999999999999999988889999999999999999999999999999999999
Q ss_pred HHhcCCCChhHHHHHHh
Q 000789 597 ELIKDPEGPYTQLVRLQ 613 (1283)
Q Consensus 597 ~l~~~~~~~~~~~~~~~ 613 (1283)
||+++ ++.|++++..|
T Consensus 677 ~l~~~-~~~y~~l~~~~ 692 (694)
T TIGR01846 677 ELLAL-QGLYARLWQQQ 692 (694)
T ss_pred HHHHc-CChHHHHHHhh
Confidence 99987 79999998754
No 35
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=4.8e-81 Score=784.92 Aligned_cols=568 Identities=25% Similarity=0.355 Sum_probs=482.5
Q ss_pred hHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 37 PFYKLFAFADKQDAVLMIVGTISAIGSGLAHPFMTLIFGHLINSFGSSDRSHVVHEVSKVAVKFLYLAAGTGIAAFLQVS 116 (1283)
Q Consensus 37 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (1283)
.+++++.+.+++++ .+++.+++.++..++.+..|++++.++|.+........ .....+++.++++.++..++.++..+
T Consensus 10 ~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (592)
T PRK10790 10 TLKRLLAYGSPWRK-PLGLAVLMLWVAAAAEVSGPLLISYFIDNMVAKGNLPL-GLVAGLAAAYVGLQLLAAGLHYAQSL 87 (592)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcch-hHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45556666655544 44566777777788888889999999997643211111 11111222233344456677888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCccHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Q 000789 117 CWMVTGERQATRIRGLYLKTILRQDIGFFDTETTTGEVIGRMSGDTILIQEAMGEKVGKFIQLMSTFFGGFVVALARGWF 196 (1283)
Q Consensus 117 ~~~~~~~~~~~~lR~~~~~~ll~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 196 (1283)
.....+.++..++|.++|+++++.|+++|++. ++|++++|+++|++.+++.+...+..++..+..+++.++++++++|.
T Consensus 88 ~~~~~~~~~~~~lr~~l~~~l~~~~~~~~~~~-~~g~~~~~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (592)
T PRK10790 88 LFNRAAVGVVQQLRTDVMDAALRQPLSAFDTQ-PVGQLISRVTNDTEVIRDLYVTVVATVLRSAALIGAMLVAMFSLDWR 166 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCC-ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88899999999999999999999999999986 99999999999999999999999888999988888888899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 197 LALVLLACLPAIVIAGGSMALIMSKMSSRGQIAYSEAGTVVEQTVSGIRTVSSFTGEKQAIEKYNNKLQVAYRAAVQQGM 276 (1283)
Q Consensus 197 l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 276 (1283)
+++++++++|+.+++..++.++.++..++.++..++.++.+.|.++|+++||+|+.|+.+.++|.+..++..+...+...
T Consensus 167 l~li~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (592)
T PRK10790 167 MALVAIMIFPAVLVVMVIYQRYSTPIVRRVRAYLADINDGFNEVINGMSVIQQFRQQARFGERMGEASRSHYMARMQTLR 246 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998888888887777888888888888888889999999999999999999999999999999988888777776666
Q ss_pred HHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Q 000789 277 VSGIG-LGVLMLTVIGTYGLAVWYGSKLIIEKGYNGGTVINVIMAIMTGGMSLGQTSPCLNAFAGGQAAAYKMFETIKRK 355 (1283)
Q Consensus 277 ~~~~~-~~~~~~~~~~~~~~~~~~g~~~v~~~~~t~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~ 355 (1283)
..+.. .++..++..+...+++++++. +..|.+++|.+++++.+......|+..+...+..++++..+++|+.++++.+
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~is~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~~ 325 (592)
T PRK10790 247 LDGFLLRPLLSLFSALILCGLLMLFGF-SASGTIEVGVLYAFISYLGRLNEPLIELTTQQSMLQQAVVAGERVFELMDGP 325 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 55443 223333332222222233333 5789999999999999998889999999999999999999999999999865
Q ss_pred CCCCCCCCCCCcccCccccEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEE
Q 000789 356 PKIDPYDTSGITLEKIEGEIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVL 435 (1283)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~ 435 (1283)
++..... ..+...++|+++||+|+|++ +.++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|.
T Consensus 326 ~~~~~~~----~~~~~~~~i~~~~v~f~y~~--~~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p~~G~I~ 399 (592)
T PRK10790 326 RQQYGND----DRPLQSGRIDIDNVSFAYRD--DNLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPLTEGEIR 399 (592)
T ss_pred CccCCCC----ccCCCCCeEEEEEEEEEeCC--CCceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEE
Confidence 4321111 11223467999999999974 24699999999999999999999999999999999999999999999
Q ss_pred ECCcccCCCCHHHHhcccEEEccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCC
Q 000789 436 IDGIDIKKLQLKWIREKIGLVSQEPILFATSLRENIAYGKENATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLS 515 (1283)
Q Consensus 436 ~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LS 515 (1283)
+||+|+++++.+++|++|+||||||++|++||+|||++++ ++++++++++++.++++++++++|+|+||.+||+|.+||
T Consensus 400 idg~~i~~~~~~~l~~~i~~v~Q~~~lF~~Ti~~NI~~~~-~~~d~~i~~a~~~~gl~~~i~~lp~Gldt~i~e~g~~LS 478 (592)
T PRK10790 400 LDGRPLSSLSHSVLRQGVAMVQQDPVVLADTFLANVTLGR-DISEEQVWQALETVQLAELARSLPDGLYTPLGEQGNNLS 478 (592)
T ss_pred ECCEEhhhCCHHHHHhheEEEccCCccccchHHHHHHhCC-CCCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCC
Confidence 9999999999999999999999999999999999999998 688999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhccCEEEEEeCCEEeEecCh
Q 000789 516 GGQKQRIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMTSRTTVVVAHRLTTIRNADLIAVVHQGKIVEKGTH 595 (1283)
Q Consensus 516 gGqkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~ 595 (1283)
|||||||+|||||+++|+|||||||||+||+++++.+.+.|+++.+++|+|+||||++.++.||+|++|++|++++.|+|
T Consensus 479 GGqrQRialARaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~~~~tvIivtHr~~~l~~~D~ii~l~~G~i~~~G~~ 558 (592)
T PRK10790 479 VGQKQLLALARVLVQTPQILILDEATANIDSGTEQAIQQALAAVREHTTLVVIAHRLSTIVEADTILVLHRGQAVEQGTH 558 (592)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEEcCH
Confidence 99999999999999999999999999999999999999999998888999999999999999999999999999999999
Q ss_pred hHHhcCCCChhHHHHHHhhcC
Q 000789 596 DELIKDPEGPYTQLVRLQEGS 616 (1283)
Q Consensus 596 ~~l~~~~~~~~~~~~~~~~~~ 616 (1283)
+||+++ ++.|+++++.+...
T Consensus 559 ~~L~~~-~~~y~~l~~~~~~~ 578 (592)
T PRK10790 559 QQLLAA-QGRYWQMYQLQLAG 578 (592)
T ss_pred HHHHhC-CCHHHHHHHHHhhh
Confidence 999987 79999999876443
No 36
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=3.1e-81 Score=786.43 Aligned_cols=511 Identities=34% Similarity=0.529 Sum_probs=466.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChhHHHHHHhhhHHHHHHHHHHHHHHHHH
Q 000789 764 YLVLGIINLIAVPFQNYFFGVAGGKLIRRIRSLTFEKVVHQEISWFDDPANSSGSVGARLSTDASTIRSLVGDSLALVVQ 843 (1283)
Q Consensus 764 ~~~l~~~~~l~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~ff~~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~ 843 (1283)
++++.++..++.++..++..+.+.+....+|..+|+++++.|.++|++ .++|++++|+++|++.+.+.+...+..++.
T Consensus 71 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~~~~--~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~ 148 (582)
T PRK11176 71 VIGLMILRGITSFISSYCISWVSGKVVMTMRRRLFGHMMGMPVSFFDK--QSTGTLLSRITYDSEQVASSSSGALITVVR 148 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCC--CCccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344566677788888888999999999999999999999999999985 789999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHH
Q 000789 844 NIATIAAGLIIAFTANWILAFVILAVSPLMLVQGYTQTKFMKGFSADAKLMYEEASQVANDAVGSIRTVASFCSEEKVMD 923 (1283)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~ 923 (1283)
.++.+++.+++++.++|++++++++++|+.++......+..++..++.++...+..+.+.|.++|+++||+++.++.+.+
T Consensus 149 ~~~~~~~~~~~l~~~~~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~ 228 (582)
T PRK11176 149 EGASIIGLFIMMFYYSWQLSLILIVIAPIVSIAIRVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETK 228 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhCcCHHHHH
Confidence 99999999999999999999999998888888877777777777788888888899999999999999999999999999
Q ss_pred HHHHHHhcHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 924 LYEKKCEGPLKNGVRRGILSGAGFGFSFLVLYCTNAFCFYIGSVLVEHGKATFGQVFKVFFALTISALGVSQTSAMAPDT 1003 (1283)
Q Consensus 924 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1003 (1283)
+|.+..++..+...+..........+...+..+...+++++|++++..|.+++|.++++..+......|+..+...+..+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~~g~is~g~~~~~~~~~~~~~~pl~~l~~~~~~~ 308 (582)
T PRK11176 229 RFDKVSNRMRQQGMKMVSASSISDPIIQLIASLALAFVLYAASFPSVMDTLTAGTITVVFSSMIALMRPLKSLTNVNAQF 308 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999888888877777777777777788888899999999999999999999888888999999999999999
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCCcCCccCCCcccEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHH
Q 000789 1004 TKAKDSAASIFEILDSKPKIDSSKDEGMTLSSVGGAIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKST 1083 (1283)
Q Consensus 1004 ~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKST 1083 (1283)
..+..+.+|+.++++.+++.+... ...+...+.|+++||+|+|+++ ++++|+|+||+|+|||++||||+|||||||
T Consensus 309 ~~~~~~~~ri~~~~~~~~~~~~~~---~~~~~~~~~i~~~~vsf~y~~~-~~~il~~i~l~i~~G~~~aIvG~sGsGKST 384 (582)
T PRK11176 309 QRGMAACQTLFAILDLEQEKDEGK---RVIERAKGDIEFRNVTFTYPGK-EVPALRNINFKIPAGKTVALVGRSGSGKST 384 (582)
T ss_pred HHHHHHHHHHHHHhcCCCcCCCCC---cCCCCCCCeEEEEEEEEecCCC-CCccccCceEEeCCCCEEEEECCCCCCHHH
Confidence 999999999999987654422111 1112234579999999999854 457999999999999999999999999999
Q ss_pred HHHHHhccCCCCcceEEECCccCCCCChHHHhcceEEEccCCCCChhhHHHHHhcCCCCCCCHHHHHHHHHHhChHHHHH
Q 000789 1084 VIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMGLVSQEPVLFNETIRTNIAYGKQGGATEEEIIAATEASNAHNFIS 1163 (1283)
Q Consensus 1084 L~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~I~ 1163 (1283)
|+++|+|+|+|++|+|++||+|+++++.+++|++|+||||||++|++||||||.++.+++++|++++++++.++++++++
T Consensus 385 Ll~ll~gl~~p~~G~I~i~g~~i~~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~al~~~~l~~~i~ 464 (582)
T PRK11176 385 IANLLTRFYDIDEGEILLDGHDLRDYTLASLRNQVALVSQNVHLFNDTIANNIAYARTEQYSREQIEEAARMAYAMDFIN 464 (582)
T ss_pred HHHHHHhccCCCCceEEECCEEhhhcCHHHHHhhceEEccCceeecchHHHHHhcCCCCCCCHHHHHHHHHHhCcHHHHH
Confidence 99999999999999999999999999999999999999999999999999999998544589999999999999999999
Q ss_pred hCCCCcccccCCCCCCCChhHHHHHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcCCceEEEEecCchHHhh
Q 000789 1164 ALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKN 1243 (1283)
Q Consensus 1164 ~lp~Gldt~vge~G~~LSgGQrQRlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~ 1243 (1283)
++|+|+||.+||+|.+|||||||||+||||++++|+|||||||||+||++||+.|.+.|.+..++||+|+||||+++++.
T Consensus 465 ~lp~Gldt~ig~~g~~LSGGqrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~~~~tvI~VtHr~~~~~~ 544 (582)
T PRK11176 465 KMDNGLDTVIGENGVLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEK 544 (582)
T ss_pred hcccccCceeCCCCCcCCHHHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999998889999999999999999
Q ss_pred cCEEEEEeCCEEEEecChHHHHhccCchhHHHHHHhhc
Q 000789 1244 ADIIAVVKNGVIAEQGSHDALMKITDGAYASLVALHVS 1281 (1283)
Q Consensus 1244 ~D~I~vl~~G~Ive~Gt~~eLl~~~~g~y~~L~~~~~~ 1281 (1283)
||+|++|++|+|+|.|+|++|+++ ++.|++|++.|..
T Consensus 545 ~D~Ii~l~~g~i~e~g~~~~l~~~-~~~y~~l~~~~~~ 581 (582)
T PRK11176 545 ADEILVVEDGEIVERGTHAELLAQ-NGVYAQLHKMQFG 581 (582)
T ss_pred CCEEEEEECCEEEEeCCHHHHHhC-CChHHHHHHHHhc
Confidence 999999999999999999999996 8999999987753
No 37
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.2e-84 Score=716.22 Aligned_cols=503 Identities=29% Similarity=0.425 Sum_probs=429.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 771 NLIAVPFQNYFFGVAGGKLIRRIRSLTFEKVVHQEISWFDDPANSSGSVGARLSTDASTIRSLVGDSLALVVQNIATIAA 850 (1283)
Q Consensus 771 ~~l~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~ff~~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~~~ 850 (1283)
.+++..++++++..+.+...+++--++|+|+..+++.|+-+ +.+|+++.-..+..+.+. ++.....++...++-+.+
T Consensus 272 sG~~~nlRtfLWi~VqQyttR~ie~~lfrHlh~LSlrwHL~--rrtGeVLrvmdrGtssvt-ll~yvVF~i~PtllDl~v 348 (790)
T KOG0056|consen 272 SGFLNNLRTFLWIPVQQYTTREIETELFRHLHNLSLRWHLN--RRTGEVLRVMDRGTSSVT-LLEYVVFQIGPTLLDLGV 348 (790)
T ss_pred ccchhhhheeEEEEhhHhHHHHHHHHHHHHHHhhceeeeec--ccccceeehhccCcchhh-HHHHHHhhcccHHHHhhh
Confidence 45677788888888999999999999999999999999985 678998887777776665 555555555555554444
Q ss_pred HHHHH-HHHhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHH
Q 000789 851 GLIIA-FTANWILAFVILAVSPLMLVQGYTQTKFMKGFSADAKLMYEEASQVANDAVGSIRTVASFCSEEKVMDLYEKKC 929 (1283)
Q Consensus 851 ~~~~~-~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~ 929 (1283)
+++.. ..++|+.+++++.+..+++.......-...+..|+......+......+++-+.+|||-|+.|++..++|.+..
T Consensus 349 a~vYF~~~Fn~wFgLIVfl~m~lY~~~Ti~iTeWRTk~rR~Mn~~~nesrAr~vDsllNFETVKyy~Ae~yEverYreAi 428 (790)
T KOG0056|consen 349 AMVYFFIKFNIWFGLIVFLMMLLYCYVTIKITEWRTKARRKMNNSWNESRARQVDSLLNFETVKYYNAEDYEVERYREAI 428 (790)
T ss_pred hhhhhhhhHhHHHHHHHHHHHHHHhheeeeeehhhHHHHHHhhhhhhhhhhhhhhhhhcchhhhccCchhhhHHHHHHHH
Confidence 44443 35789999988888877776655444334444556666667778888999999999999999999999999999
Q ss_pred hcHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 930 EGPLKNGVRRGILSGAGFGFSFLVLYCTNAFCFYIGSVLVEHGKATFGQVFKVFFALTISALGVSQTSAMAPDTTKAKDS 1009 (1283)
Q Consensus 930 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 1009 (1283)
..+++..++....-.........+..+..+....+..+++..+..++|+++.+..++....+|+.........+++...-
T Consensus 429 l~Yqk~E~ks~~sLnfLN~~Qn~Ii~lgll~gsll~aY~Vt~q~ltVGDfVlf~TYliqLy~PLN~FGT~YR~iQ~nfiD 508 (790)
T KOG0056|consen 429 LKYQKQEWKSLASLNFLNIVQNGIIGLGLLAGSLLCAYRVTEQTLTVGDFVLFLTYLIQLYMPLNFFGTYYRSIQKNFID 508 (790)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhHHhhhhheeeeeeeeccccccceehHHHHHHHHhCchHHHHHHHHHHHHhhhh
Confidence 99998877754433222222222222333333334455667899999999999999999999999999999999999999
Q ss_pred HHHHHHHhccCCCCCCCCCcCCccCCCcccEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHh
Q 000789 1010 AASIFEILDSKPKIDSSKDEGMTLSSVGGAIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIE 1089 (1283)
Q Consensus 1010 ~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~ 1089 (1283)
+|+++++++++++..+.+ ...+....+|.|+|+||+|.|. |.+|+|+||||+++||+.+|+|||||+||||++++|+
T Consensus 509 mEnmfdllkee~eVvd~P-~a~pl~~~~G~i~fsnvtF~Y~--p~k~vl~disF~v~pGktvAlVG~SGaGKSTimRlLf 585 (790)
T KOG0056|consen 509 MENMFDLLKEEPEVVDLP-GAPPLKVTQGKIEFSNVTFAYD--PGKPVLSDISFTVQPGKTVALVGPSGAGKSTIMRLLF 585 (790)
T ss_pred HHHHHHHhhcCchhhcCC-CCCCccccCCeEEEEEeEEecC--CCCceeecceEEecCCcEEEEECCCCCchhHHHHHHH
Confidence 999999999888765322 1122233678999999999997 4578999999999999999999999999999999999
Q ss_pred ccCCCCcceEEECCccCCCCChHHHhcceEEEccCCCCChhhHHHHHhcCCCCCCCHHHHHHHHHHhChHHHHHhCCCCc
Q 000789 1090 RFYDPDSGHVLLDNIELPKFKLSWLRQQMGLVSQEPVLFNETIRTNIAYGKQGGATEEEIIAATEASNAHNFISALPHGY 1169 (1283)
Q Consensus 1090 rl~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~I~~lp~Gl 1169 (1283)
||||.++|+|+|||+||+++..++||++||+||||..||+.||.+||.|++ +.+++||+.+|++.|++||-|.++|+||
T Consensus 586 Rffdv~sGsI~iDgqdIrnvt~~SLRs~IGVVPQDtvLFNdTI~yNIryak-~~AsneevyaAAkAA~IHdrIl~fPegY 664 (790)
T KOG0056|consen 586 RFFDVNSGSITIDGQDIRNVTQSSLRSSIGVVPQDTVLFNDTILYNIRYAK-PSASNEEVYAAAKAAQIHDRILQFPEGY 664 (790)
T ss_pred HHhhccCceEEEcCchHHHHHHHHHHHhcCcccCcceeecceeeeheeecC-CCCChHHHHHHHHHhhHHHHHhcCchhh
Confidence 999999999999999999999999999999999999999999999999994 5899999999999999999999999999
Q ss_pred ccccCCCCCCCChhHHHHHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcCCceEEEEecCchHHhhcCEEEE
Q 000789 1170 ETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAV 1249 (1283)
Q Consensus 1170 dt~vge~G~~LSgGQrQRlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~~D~I~v 1249 (1283)
+|.|||+|-.||||||||+||||++|++|.|++|||||||||..||+.||.+|.+..+++|.|+|||||||+.+||.|+|
T Consensus 665 ~t~VGERGLkLSGGEKQRVAiARtiLK~P~iIlLDEATSALDT~tER~IQaaL~rlca~RTtIVvAHRLSTivnAD~ILv 744 (790)
T KOG0056|consen 665 NTRVGERGLKLSGGEKQRVAIARTILKAPSIILLDEATSALDTNTERAIQAALARLCANRTTIVVAHRLSTIVNADLILV 744 (790)
T ss_pred hhhhhhcccccCCcchhhHHHHHHHhcCCcEEEEcchhhhcCCccHHHHHHHHHHHhcCCceEEEeeeehheecccEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCEEEEecChHHHHhccCchhHHHHHHhh
Q 000789 1250 VKNGVIAEQGSHDALMKITDGAYASLVALHV 1280 (1283)
Q Consensus 1250 l~~G~Ive~Gt~~eLl~~~~g~y~~L~~~~~ 1280 (1283)
+++|+|+|.|+|+||+++.+|.|++||+.|+
T Consensus 745 i~~G~IvErG~HeeLl~rdgG~Ya~MWq~qq 775 (790)
T KOG0056|consen 745 ISNGRIVERGRHEELLKRDGGAYADMWQAQQ 775 (790)
T ss_pred EeCCeEeecCcHHHHHhccCCcHHHHHHHHH
Confidence 9999999999999999988999999997653
No 38
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1e-81 Score=713.42 Aligned_cols=571 Identities=26% Similarity=0.380 Sum_probs=477.9
Q ss_pred hhHHHHHHhhchhh----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC--CCchhhHHHHHHHHHHHHHHHHHHHH
Q 000789 36 VPFYKLFAFADKQD----AVLMIVGTISAIGSGLAHPFMTLIFGHLINSFGS--SDRSHVVHEVSKVAVKFLYLAAGTGI 109 (1283)
Q Consensus 36 ~~~~~l~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (1283)
...+.+..|..++. +..++.++++.+.+.......|.+++.++|.+.. ..+ .........+..+.++.++..+
T Consensus 11 ~~~~~l~~~~~~k~~p~~r~~v~~~l~~l~~aK~l~v~vp~~~~~~id~l~~~~~~~-a~~~~~~~~~~~y~iar~~s~~ 89 (591)
T KOG0057|consen 11 KILRSLVSYKWPKSRPVLRFRVFPALGLLLGAKILNVQVPFIFKLIIDGLNDADGNP-AVLSTITALLAGYGIARLGSSV 89 (591)
T ss_pred HHHHHHHhhheecCCceeeehHHHHHHHHHhhhHhheehHHHHHHHHhhhhhcccCc-chhhhhhHHHHHHHHHHHHHHH
Confidence 34555665554432 2334445555555677888888999999998742 122 1122223334556666777889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCccHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH-H
Q 000789 110 AAFLQVSCWMVTGERQATRIRGLYLKTILRQDIGFFDTETTTGEVIGRMSGDTILIQEAMGEKVGKFIQLMSTFFGGF-V 188 (1283)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~lR~~~~~~ll~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~-~ 188 (1283)
++.++...+.++.+++.++.-.++|.|++.+++++|.+. .+|++.+.+..-...|..++...+..++..++-+.... .
T Consensus 90 F~el~~~vfa~v~q~~iR~~~~~vf~~~~~ld~~~~~~~-~tG~l~~~idRgsraI~~vl~~~V~~i~p~~~~i~~v~~~ 168 (591)
T KOG0057|consen 90 FNELRNFVFAKVAQRVIRDSSSDVFRHLMSLDLSFFLSR-GTGALNRIIDRGSRAISFVLSAMVFNIIPTLFEIALVSGI 168 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHhhcCC-CcchHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999887 99999999999999999998887777777765544333 3
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHHH
Q 000789 189 VALARGWFLALVLLACLPAIVIAGGSMALIMSKMSSRGQIAYSEAGTVVEQTVSGIRTVSSFTGEKQAIEKYNNKLQVAY 268 (1283)
Q Consensus 189 ~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~ 268 (1283)
+..-.++..+++.+..+..+..+......+..+..++..++.+.....+-|.+.+..+||+||.|+++.++|.....++.
T Consensus 169 l~~~~Ga~~~li~~~~v~~Y~a~Ti~~t~~Rn~fR~~~N~Adn~as~~~~dsL~Nye~VKsfNnE~~Ea~~y~~~l~~~~ 248 (591)
T KOG0057|consen 169 LYYKFGAAFALITLGTVGAYAAFTIVVTRWRNRFRKAMNNADNSASRRAYDSLINYEIVKSFNNEEYEASRYDGSLKTYE 248 (591)
T ss_pred HHHHhchHHHHHHHHHHHHhheeEEeehhHHHHHHHHHHhhhhHHHHHHHHHHhhHHHHHHcccHHHHHHHHHHHHHHHH
Confidence 33445666666666666666666666666666677778888889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 269 RAAVQQGMVSGIGLGVLMLTVIGTYGLAVWYGSKLIIEKGYNGGTVINVIMAIMTGGMSLGQTSPCLNAFAGGQAAAYKM 348 (1283)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~t~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri 348 (1283)
+...+.....++....-..+..+..+.+.+.|..-+.++.+|.|.++.......++..|+..+...+..+.++..-+.-.
T Consensus 249 ~~~~~~~~sl~~lnfgQ~~iFsv~~~~im~l~~~gi~~~~mtvgdlv~~n~l~~qL~~~l~~Lg~vyr~~~q~l~Dm~~~ 328 (591)
T KOG0057|consen 249 RAGLKYSSSLAFLNFGQKAIFSVALTFIMVLGSNGIAAGKMTVGDLVMVNSLLFQLSLPLNFLGSVYRELRQALTDMRTL 328 (591)
T ss_pred HhhhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccccccchhhHHHHHHHHHhHHHHHHHHHHHHHHHHHhHHHH
Confidence 99888777776666555555556666777778888889999999999888888888889999888888887777766666
Q ss_pred HHHHccCCCCCCCCCCCCcccCccccEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCC
Q 000789 349 FETIKRKPKIDPYDTSGITLEKIEGEIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYD 428 (1283)
Q Consensus 349 ~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~ 428 (1283)
+...+....+.+ ...++...++.|+|+||+|+|++ ++++|+++||+|++||++||||+|||||||++++|.||++
T Consensus 329 ~~l~~~~~~i~~---~~~~i~~~~~~I~F~dV~f~y~~--k~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~LlrF~d 403 (591)
T KOG0057|consen 329 FILLEVDEDIQE---AALPIELFGGSIEFDDVHFSYGP--KRKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLLRFFD 403 (591)
T ss_pred Hhhhhhhhhhhh---ccCCcccCCCcEEEEeeEEEeCC--CCceecceeEEecCCCEEEEECCCCCCHHHHHHHHHHHhc
Confidence 655443222211 11233345678999999999974 4569999999999999999999999999999999999999
Q ss_pred CCCceEEECCcccCCCCHHHHhcccEEEccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCcccccc
Q 000789 429 PDAGEVLIDGIDIKKLQLKWIREKIGLVSQEPILFATSLRENIAYGKENATDQEIRTAIELANAAKFIDKLPKGLDTMAG 508 (1283)
Q Consensus 429 ~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~ 508 (1283)
++|+|+|||+|+++++++++|+.|||||||..||++||.+||.||++.++++++.++|+.+++||-+.++|+||+|.+|
T Consensus 404 -~sG~I~IdG~dik~~~~~SlR~~Ig~VPQd~~LFndTIl~NI~YGn~sas~eeV~e~~k~a~~hd~i~~l~~GY~T~VG 482 (591)
T KOG0057|consen 404 -YSGSILIDGQDIKEVSLESLRQSIGVVPQDSVLFNDTILYNIKYGNPSASDEEVVEACKRAGLHDVISRLPDGYQTLVG 482 (591)
T ss_pred -cCCcEEECCeeHhhhChHHhhhheeEeCCcccccchhHHHHhhcCCCCcCHHHHHHHHHHcCcHHHHHhccccchhhHh
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhccCEEEEEeCCE
Q 000789 509 EHGTQLSGGQKQRIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMTSRTTVVVAHRLTTIRNADLIAVVHQGK 588 (1283)
Q Consensus 509 ~~g~~LSgGqkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~ 588 (1283)
|+|..|||||||||+||||+++||||++||||||+||.+||+.+.+.+.+...+||+|+|.||++++++||+|+++++|+
T Consensus 483 erG~~LSGGekQrvslaRa~lKda~Il~~DEaTS~LD~~TE~~i~~~i~~~~~~rTvI~IvH~l~ll~~~DkI~~l~nG~ 562 (591)
T KOG0057|consen 483 ERGLMLSGGEKQRVSLARAFLKDAPILLLDEATSALDSETEREILDMIMDVMSGRTVIMIVHRLDLLKDFDKIIVLDNGT 562 (591)
T ss_pred hcccccccchHHHHHHHHHHhcCCCeEEecCcccccchhhHHHHHHHHHHhcCCCeEEEEEecchhHhcCCEEEEEECCe
Confidence 99999999999999999999999999999999999999999999999999889999999999999999999999999999
Q ss_pred EeEecChhHHhcCCCChhHHHHHHhhc
Q 000789 589 IVEKGTHDELIKDPEGPYTQLVRLQEG 615 (1283)
Q Consensus 589 i~~~g~~~~l~~~~~~~~~~~~~~~~~ 615 (1283)
+.|.|+|+||++ +.+.|.++|..|..
T Consensus 563 v~e~gth~ell~-~s~~~~~~w~~~~~ 588 (591)
T KOG0057|consen 563 VKEYGTHSELLA-PSELYADLWTTQTS 588 (591)
T ss_pred eEEeccHHHHhh-hhhHHHHHhccccc
Confidence 999999999999 58999999976643
No 39
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=3.1e-81 Score=799.29 Aligned_cols=553 Identities=26% Similarity=0.403 Sum_probs=480.2
Q ss_pred HHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 706 RLAYLNKPEFPVLLIGSIAAGIHGVIFPIFGLLLSSSIRMFFEPEDKLRKDSRFWALIYLVLGIINLIAVPFQNYFFGVA 785 (1283)
Q Consensus 706 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~ 785 (1283)
+++.+.++.++.+....+++++..++....++++..+++......+ ......+..+++++.++..++.+++.++..+.
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~p~~~~~iiD~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (694)
T TIGR03375 137 WFWSTLKESWPLYRDVLIASLLINLLALASPLFVMNVYDRVVPNQA--FETLWVLAIGVALAIVFDFVLKTLRSYFLDVA 214 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCc--HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334444455555444444444444444455555555554332111 11122233344445566778888999999999
Q ss_pred HHHHHHHHHHHHHHHHHcCCccccccCCCChhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Q 000789 786 GGKLIRRIRSLTFEKVVHQEISWFDDPANSSGSVGARLSTDASTIRSLVGDSLALVVQNIATIAAGLIIAFTANWILAFV 865 (1283)
Q Consensus 786 ~~~~~~~lr~~~~~~ll~~~~~ff~~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv 865 (1283)
+.++..++|..+|+++++.|++| + ++++|++++|+ +|++.+++++...+...+..++.+++.++++++++|+++++
T Consensus 215 ~~~~~~~l~~~~~~~ll~l~~~~-~--~~~~G~~~~r~-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li 290 (694)
T TIGR03375 215 GKKADLILSAKLFERVLGLRMEA-R--PASVGSFANQL-REFESVRDFFTSATLTALIDLPFALLFLLVIAIIGGPLVWV 290 (694)
T ss_pred HHHHHHHHHHHHHHHHhCCCccc-C--CCChhHHHHHH-HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 99999999999999999999998 4 37899999999 79999999998888888888888888888899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHhcHHHhHHHHHHHHHH
Q 000789 866 ILAVSPLMLVQGYTQTKFMKGFSADAKLMYEEASQVANDAVGSIRTVASFCSEEKVMDLYEKKCEGPLKNGVRRGILSGA 945 (1283)
Q Consensus 866 ~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 945 (1283)
+++.+|++++..++..+..++..++..+...+..+.+.|+++|+++||+|+.|+.+.++|.+..++..+...+.......
T Consensus 291 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (694)
T TIGR03375 291 PLVAIPLILLPGLLLQRPLSRLAEESMRESAQRNAVLVESLSGLETIKALNAEGRFQRRWEQTVAALARSGLKSRFLSNL 370 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999988888888888888888888899999999999999999999999999999999999999998888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCC
Q 000789 946 GFGFSFLVLYCTNAFCFYIGSVLVEHGKATFGQVFKVFFALTISALGVSQTSAMAPDTTKAKDSAASIFEILDSKPKIDS 1025 (1283)
Q Consensus 946 ~~~~~~~~~~~~~~~~~~~g~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~ 1025 (1283)
...+...+..+..++++++|++++..|.+++|.++++..+...+..|+..+...+.++..+..+.+|+.++++.+++.+.
T Consensus 371 ~~~~~~~~~~~~~~~il~~g~~~v~~g~ls~G~l~a~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~~ 450 (694)
T TIGR03375 371 ATNFAQFIQQLVSVAIVVVGVYLISDGELTMGGLIACVMLSGRALAPLGQLAGLLTRYQQAKTALQSLDELMQLPVERPE 450 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCC
Confidence 88888888888888899999999999999999999999999999999999999999999999999999999987665322
Q ss_pred CCCcCCccCCCcccEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCcc
Q 000789 1026 SKDEGMTLSSVGGAIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIE 1105 (1283)
Q Consensus 1026 ~~~~~~~~~~~~g~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~d 1105 (1283)
.. .....+...+.|+|+||+|+|++. ++++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|.+||+|
T Consensus 451 ~~-~~~~~~~~~~~I~~~~vsf~Y~~~-~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~ 528 (694)
T TIGR03375 451 GT-RFLHRPRLQGEIEFRNVSFAYPGQ-ETPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQPTEGSVLLDGVD 528 (694)
T ss_pred CC-CCCCCCCccceEEEEEEEEEeCCC-CccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEE
Confidence 11 111122345689999999999753 4579999999999999999999999999999999999999999999999999
Q ss_pred CCCCChHHHhcceEEEccCCCCChhhHHHHHhcCCCCCCCHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHH
Q 000789 1106 LPKFKLSWLRQQMGLVSQEPVLFNETIRTNIAYGKQGGATEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQK 1185 (1283)
Q Consensus 1106 i~~~~~~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQr 1185 (1283)
+++++.+++|++|+||||||++|+|||+|||.+++ ++++++++++|++.++++++|+++|+||||.+||+|.+||||||
T Consensus 529 l~~~~~~~lr~~i~~v~Q~~~lf~~TI~eNi~~~~-~~~~~~~i~~a~~~~~l~~~i~~lp~gl~T~i~e~G~~LSgGQr 607 (694)
T TIGR03375 529 IRQIDPADLRRNIGYVPQDPRLFYGTLRDNIALGA-PYADDEEILRAAELAGVTEFVRRHPDGLDMQIGERGRSLSGGQR 607 (694)
T ss_pred hhhCCHHHHHhccEEECCChhhhhhhHHHHHhCCC-CCCCHHHHHHHHHHcChHHHHHhCcccccceecCCCCCCCHHHH
Confidence 99999999999999999999999999999999984 46899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcCCceEEEEecCchHHhhcCEEEEEeCCEEEEecChHHHH
Q 000789 1186 QRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALM 1265 (1283)
Q Consensus 1186 QRlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~~D~I~vl~~G~Ive~Gt~~eLl 1265 (1283)
|||+||||++++|+|||||||||+||++||+.|++.|++..+++|+|+||||+++++.||+|+||++|+|+|+|+|+||+
T Consensus 608 QRlalARall~~p~iliLDE~Ts~LD~~te~~i~~~l~~~~~~~T~iiItHrl~~~~~~D~iivl~~G~i~e~G~~~eLl 687 (694)
T TIGR03375 608 QAVALARALLRDPPILLLDEPTSAMDNRSEERFKDRLKRWLAGKTLVLVTHRTSLLDLVDRIIVMDNGRIVADGPKDQVL 687 (694)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhCCEEEEEeCCEEEeeCCHHHHH
Confidence 99999999999999999999999999999999999999998999999999999999999999999999999999999998
Q ss_pred hc
Q 000789 1266 KI 1267 (1283)
Q Consensus 1266 ~~ 1267 (1283)
++
T Consensus 688 ~~ 689 (694)
T TIGR03375 688 EA 689 (694)
T ss_pred HH
Confidence 75
No 40
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=1e-80 Score=781.90 Aligned_cols=565 Identities=26% Similarity=0.357 Sum_probs=474.7
Q ss_pred HHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 705 RRLAYLNKPEFPVLLIGSIAAGIHGVIFPIFGLLLSSSIRMFFEPEDKLRKDSRFWALIYLVLGIINLIAVPFQNYFFGV 784 (1283)
Q Consensus 705 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~ 784 (1283)
+++..+.++.++.+.+..++.++...+....++++..+++..+...+........+.++++++.++..++.+++.++...
T Consensus 12 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (592)
T PRK10790 12 KRLLAYGSPWRKPLGLAVLMLWVAAAAEVSGPLLISYFIDNMVAKGNLPLGLVAGLAAAYVGLQLLAAGLHYAQSLLFNR 91 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444455555666666666666666666666667766665442211100111112333445555677778888999999
Q ss_pred HHHHHHHHHHHHHHHHHHcCCccccccCCCChhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Q 000789 785 AGGKLIRRIRSLTFEKVVHQEISWFDDPANSSGSVGARLSTDASTIRSLVGDSLALVVQNIATIAAGLIIAFTANWILAF 864 (1283)
Q Consensus 785 ~~~~~~~~lr~~~~~~ll~~~~~ff~~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~l 864 (1283)
.+.+...++|.++|+++++.|.+||++ +++|++++|+++|++.+++.+...+..++..+..+++.+++++.++|++++
T Consensus 92 ~~~~~~~~lr~~l~~~l~~~~~~~~~~--~~~g~~~~~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l 169 (592)
T PRK10790 92 AAVGVVQQLRTDVMDAALRQPLSAFDT--QPVGQLISRVTNDTEVIRDLYVTVVATVLRSAALIGAMLVAMFSLDWRMAL 169 (592)
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHhCC--CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999985 789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHhcHHHhHHHHHHHHH
Q 000789 865 VILAVSPLMLVQGYTQTKFMKGFSADAKLMYEEASQVANDAVGSIRTVASFCSEEKVMDLYEKKCEGPLKNGVRRGILSG 944 (1283)
Q Consensus 865 v~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 944 (1283)
++++++|++++......+..+...++..+...+....+.|.+.|+++||+|+.++.+.++|.+..++..+...+.....+
T Consensus 170 i~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (592)
T PRK10790 170 VAIMIFPAVLVVMVIYQRYSTPIVRRVRAYLADINDGFNEVINGMSVIQQFRQQARFGERMGEASRSHYMARMQTLRLDG 249 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98888888877777666766777777777788889999999999999999999999999999988887776666555444
Q ss_pred HH-HHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCC
Q 000789 945 AG-FGFSFLVLYCTNAFCFYIGSVLVEHGKATFGQVFKVFFALTISALGVSQTSAMAPDTTKAKDSAASIFEILDSKPKI 1023 (1283)
Q Consensus 945 ~~-~~~~~~~~~~~~~~~~~~g~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~ 1023 (1283)
.. ..+..++..+...+++++++. +..|.+++|.++++..+...+..|+..+...+..+..+..+.+|+.++++.+++.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~is~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~ 328 (592)
T PRK10790 250 FLLRPLLSLFSALILCGLLMLFGF-SASGTIEVGVLYAFISYLGRLNEPLIELTTQQSMLQQAVVAGERVFELMDGPRQQ 328 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 32 222233333222222233333 5789999999999999999999999999999999999999999999999765432
Q ss_pred CCCCCcCCccCCCcccEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECC
Q 000789 1024 DSSKDEGMTLSSVGGAIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDN 1103 (1283)
Q Consensus 1024 ~~~~~~~~~~~~~~g~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG 1103 (1283)
... . ..+...+.|+|+||+|+||+ +.++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|.+||
T Consensus 329 ~~~--~--~~~~~~~~i~~~~v~f~y~~--~~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p~~G~I~idg 402 (592)
T PRK10790 329 YGN--D--DRPLQSGRIDIDNVSFAYRD--DNLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPLTEGEIRLDG 402 (592)
T ss_pred CCC--C--ccCCCCCeEEEEEEEEEeCC--CCceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECC
Confidence 111 1 11223467999999999984 34699999999999999999999999999999999999999999999999
Q ss_pred ccCCCCChHHHhcceEEEccCCCCChhhHHHHHhcCCCCCCCHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChh
Q 000789 1104 IELPKFKLSWLRQQMGLVSQEPVLFNETIRTNIAYGKQGGATEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGG 1183 (1283)
Q Consensus 1104 ~di~~~~~~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgG 1183 (1283)
+|+++++.+++|++|+||||||.+|++||||||+++. +++|++++++++.++++++++++|+||||.+||+|.+||||
T Consensus 403 ~~i~~~~~~~l~~~i~~v~Q~~~lF~~Ti~~NI~~~~--~~~d~~i~~a~~~~gl~~~i~~lp~Gldt~i~e~g~~LSGG 480 (592)
T PRK10790 403 RPLSSLSHSVLRQGVAMVQQDPVVLADTFLANVTLGR--DISEEQVWQALETVQLAELARSLPDGLYTPLGEQGNNLSVG 480 (592)
T ss_pred EEhhhCCHHHHHhheEEEccCCccccchHHHHHHhCC--CCCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHH
Confidence 9999999999999999999999999999999999984 58999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcCCceEEEEecCchHHhhcCEEEEEeCCEEEEecChHH
Q 000789 1184 QKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDA 1263 (1283)
Q Consensus 1184 QrQRlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~~D~I~vl~~G~Ive~Gt~~e 1263 (1283)
|||||||||||+++|+|||||||||+||++||+.|++.|++..++||+|+||||+++++.||+|++|++|+++|.|+|+|
T Consensus 481 qrQRialARaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~~~~tvIivtHr~~~l~~~D~ii~l~~G~i~~~G~~~~ 560 (592)
T PRK10790 481 QKQLLALARVLVQTPQILILDEATANIDSGTEQAIQQALAAVREHTTLVVIAHRLSTIVEADTILVLHRGQAVEQGTHQQ 560 (592)
T ss_pred HHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEEcCHHH
Confidence 99999999999999999999999999999999999999999888999999999999999999999999999999999999
Q ss_pred HHhccCchhHHHHHHhhc
Q 000789 1264 LMKITDGAYASLVALHVS 1281 (1283)
Q Consensus 1264 Ll~~~~g~y~~L~~~~~~ 1281 (1283)
|+++ ++.|++|++.|..
T Consensus 561 L~~~-~~~y~~l~~~~~~ 577 (592)
T PRK10790 561 LLAA-QGRYWQMYQLQLA 577 (592)
T ss_pred HHhC-CCHHHHHHHHHhh
Confidence 9996 8999999987754
No 41
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=4.5e-80 Score=775.22 Aligned_cols=565 Identities=33% Similarity=0.511 Sum_probs=506.2
Q ss_pred HHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 39 YKLFAFADKQDAVLMIVGTISAIGSGLAHPFMTLIFGHLINSFGSSDRSHVVHEVSKVAVKFLYLAAGTGIAAFLQVSCW 118 (1283)
Q Consensus 39 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (1283)
++++++.++++ ..++++++++++.+++.+..|++++.++|........ ..+......++++.++.+++.++..++.
T Consensus 3 ~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 78 (571)
T TIGR02203 3 RRLWSYVRPYK-AGLVLAGVAMILVAATESTLAALLKPLLDDGFGGRDR---SVLWWVPLVVIGLAVLRGICSFVSTYLL 78 (571)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCch---hHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555555543 4567777788888888888899999999865432211 1222233344555666778888888999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCChhhHhccCCccHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Q 000789 119 MVTGERQATRIRGLYLKTILRQDIGFFDTETTTGEVIGRMSGDTILIQEAMGEKVGKFIQLMSTFFGGFVVALARGWFLA 198 (1283)
Q Consensus 119 ~~~~~~~~~~lR~~~~~~ll~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~ 198 (1283)
.+.+.++..++|..+++++++.|.++|++. +.|++++|+++|++.+++++...+..++..++.+++.++++++++|.++
T Consensus 79 ~~~~~~~~~~lr~~l~~~~~~~~~~~~~~~-~~g~~~~~l~~di~~i~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~l~ 157 (571)
T TIGR02203 79 SWVSNKVVRDIRVRMFEKLLGLPVSFFDRQ-PTGTLLSRITFDSEQVASAATDAFIVLVRETLTVIGLFIVLLYYSWQLT 157 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHhCCC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 999999999999999999999999999876 8999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 199 LVLLACLPAIVIAGGSMALIMSKMSSRGQIAYSEAGTVVEQTVSGIRTVSSFTGEKQAIEKYNNKLQVAYRAAVQQGMVS 278 (1283)
Q Consensus 199 l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (1283)
+++++++|+.+++..++.++.++..++.++..++..+.+.|.++|+++||.++.++.+.++|.+..++..+...+.....
T Consensus 158 ~i~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (571)
T TIGR02203 158 LIVVVMLPVLSILMRRVSKRLRRISKEIQNSMGQVTTVAEETLQGYRVVKLFGGQAYETRRFDAVSNRNRRLAMKMTSAG 237 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCC
Q 000789 279 GIGLGVLMLTVIGTYGLAVWYGSKLIIEKGYNGGTVINVIMAIMTGGMSLGQTSPCLNAFAGGQAAAYKMFETIKRKPKI 358 (1283)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~t~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~ 358 (1283)
+....+..++..+..++++++|++++.+|.+|+|.++++..++.....|+..+...+..+++++.+.+|+.++++.+++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~ 317 (571)
T TIGR02203 238 SISSPITQLIASLALAVVLFIALFQAQAGSLTAGDFTAFITAMIALIRPLKSLTNVNAPMQRGLAAAESLFTLLDSPPEK 317 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 88887777777788888889999999999999999999999999999999999999999999999999999999876553
Q ss_pred CCCCCCCCcccCccccEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECC
Q 000789 359 DPYDTSGITLEKIEGEIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDG 438 (1283)
Q Consensus 359 ~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g 438 (1283)
+... ....+..+.|+++||+|+|+++ +.++|+|+||+|++||+++|+|+||||||||+++|+|+|+|++|+|++||
T Consensus 318 ~~~~---~~~~~~~~~i~~~~v~f~y~~~-~~~il~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~~~~G~I~i~g 393 (571)
T TIGR02203 318 DTGT---RAIERARGDVEFRNVTFRYPGR-DRPALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEPDSGQILLDG 393 (571)
T ss_pred CCCC---CCCCCCCCeEEEEEEEEEcCCC-CCccccCeeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECC
Confidence 2211 1112234679999999999754 35799999999999999999999999999999999999999999999999
Q ss_pred cccCCCCHHHHhcccEEEccCCCCCcccHHHHHhcCCC-CCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChH
Q 000789 439 IDIKKLQLKWIREKIGLVSQEPILFATSLRENIAYGKE-NATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGG 517 (1283)
Q Consensus 439 ~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~-~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgG 517 (1283)
+|+++++.+++|++|+||||+|++|++|++|||.++.+ +.++++++++++.+++++++.++|+|+||.+||+|.+||||
T Consensus 394 ~~i~~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~~l~~~~l~~~i~~lp~gldt~i~~~g~~LSgG 473 (571)
T TIGR02203 394 HDLADYTLASLRRQVALVSQDVVLFNDTIANNIAYGRTEQADRAEIERALAAAYAQDFVDKLPLGLDTPIGENGVLLSGG 473 (571)
T ss_pred EeHHhcCHHHHHhhceEEccCcccccccHHHHHhcCCCCCCCHHHHHHHHHHcChHHHHHhCcCcccceecCCCCcCCHH
Confidence 99999999999999999999999999999999999986 78999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhccCEEEEEeCCEEeEecChhH
Q 000789 518 QKQRIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMTSRTTVVVAHRLTTIRNADLIAVVHQGKIVEKGTHDE 597 (1283)
Q Consensus 518 qkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~~~ 597 (1283)
|||||+||||++++|+|||||||||+||+++++.+.+.|.+..+++|+|+||||++.++.||+|++|++|++++.|+|++
T Consensus 474 qrQRiaLARall~~~~illLDEpts~LD~~~~~~i~~~L~~~~~~~tiIiitH~~~~~~~~D~ii~l~~g~i~~~g~~~~ 553 (571)
T TIGR02203 474 QRQRLAIARALLKDAPILILDEATSALDNESERLVQAALERLMQGRTTLVIAHRLSTIEKADRIVVMDDGRIVERGTHNE 553 (571)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHhCCCEEEEEehhhHHHHhCCEEEEEeCCEEEeeCCHHH
Confidence 99999999999999999999999999999999999999999888999999999999999999999999999999999999
Q ss_pred HhcCCCChhHHHHHHh
Q 000789 598 LIKDPEGPYTQLVRLQ 613 (1283)
Q Consensus 598 l~~~~~~~~~~~~~~~ 613 (1283)
++++ ++.|++++..+
T Consensus 554 l~~~-~~~~~~~~~~~ 568 (571)
T TIGR02203 554 LLAR-NGLYAQLHNMQ 568 (571)
T ss_pred HHHc-CCHHHHHHHHh
Confidence 9987 67888877644
No 42
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=100.00 E-value=7.4e-80 Score=772.83 Aligned_cols=567 Identities=27% Similarity=0.384 Sum_probs=488.0
Q ss_pred hhHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 36 VPFYKLFAFADKQDAVLMIVGTISAIGSGLAHPFMTLIFGHLINSFGSSDRSHVVHEVSKVAVKFLYLAAGTGIAAFLQV 115 (1283)
Q Consensus 36 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (1283)
..+++++++.++++ ..+.+.+++.++..++.+..|++++.++|.+.... . .....+.++++.++..+..++..
T Consensus 5 ~~~~~l~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~iid~~~~~~--~----~~~~~~~~~~~~~~~~~~~~~~~ 77 (588)
T PRK13657 5 RLYARVLQYLGAEK-RLGILLAVANVLLAAATFAEPILFGRIIDAISGKG--D----IFPLLAAWAGFGLFNIIAGVLVA 77 (588)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc--c----HHHHHHHHHHHHHHHHHHHHHHH
Confidence 34667777776553 34556666777777777888889999999865421 1 11112222222333333444444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCccHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Q 000789 116 SCWMVTGERQATRIRGLYLKTILRQDIGFFDTETTTGEVIGRMSGDTILIQEAMGEKVGKFIQLMSTFFGGFVVALARGW 195 (1283)
Q Consensus 116 ~~~~~~~~~~~~~lR~~~~~~ll~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 195 (1283)
++..+...++..++|.++|+|++++|+.+|++. ++|++++|+++|++.+.+.+...+..++..++.+++.++++++++|
T Consensus 78 ~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~-~~g~~~~~~~~di~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (588)
T PRK13657 78 RHADRLAHRRRLAVLTEYFERIIQLPLAWHSQR-GSGRALHTLLRGTDALFGLWLEFMREHLATLVALVVLLPLALFMNW 156 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHCcC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444555666666777799999999999999876 9999999999999999988888888888888888888888999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 196 FLALVLLACLPAIVIAGGSMALIMSKMSSRGQIAYSEAGTVVEQTVSGIRTVSSFTGEKQAIEKYNNKLQVAYRAAVQQG 275 (1283)
Q Consensus 196 ~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~ 275 (1283)
.+++++++++|+.+++..++.++.++..++.++..++.++.+.|.++|+++||.|+.++.+.++|.+..++..+...+..
T Consensus 157 ~l~l~~l~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (588)
T PRK13657 157 RLSLVLVVLGIVYTLITTLVMRKTKDGQAAVEEHYHDLFAHVSDAIGNVSVVQSYNRIEAETQALRDIADNLLAAQMPVL 236 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999988888888998888888889999999999999999999999999999999999999999888888877
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Q 000789 276 MVSGIGLGVLMLTVIGTYGLAVWYGSKLIIEKGYNGGTVINVIMAIMTGGMSLGQTSPCLNAFAGGQAAAYKMFETIKRK 355 (1283)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~t~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~ 355 (1283)
...+....+..++..+..++++++|++++.+|.+|+|.+++++.++.....|+..+...+..+..+..+.+|+.++++.+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~a~~~l~~~~~~~l~~l~~~~~~~~~~~~~~~~i~~l~~~~ 316 (588)
T PRK13657 237 SWWALASVLNRAASTITMLAILVLGAALVQKGQLRVGEVVAFVGFATLLIGRLDQVVAFINQVFMAAPKLEEFFEVEDAV 316 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 77777777777777777778889999999999999999999999888888999999999999999999999999998865
Q ss_pred CCCCCCCCCCCcccCccccEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEE
Q 000789 356 PKIDPYDTSGITLEKIEGEIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVL 435 (1283)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~ 435 (1283)
++.+... .........+.|+++||+|+|+++ .++|+|+||+++|||+++|+|+||||||||+++|+|+|+|++|+|.
T Consensus 317 ~~~~~~~-~~~~~~~~~~~I~~~~vsf~y~~~--~~iL~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~p~~G~I~ 393 (588)
T PRK13657 317 PDVRDPP-GAIDLGRVKGAVEFDDVSFSYDNS--RQGVEDVSFEAKPGQTVAIVGPTGAGKSTLINLLQRVFDPQSGRIL 393 (588)
T ss_pred cccCCCC-CCCCcCCCCCeEEEEEEEEEeCCC--CceecceeEEECCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEE
Confidence 4422111 111112234579999999999743 4699999999999999999999999999999999999999999999
Q ss_pred ECCcccCCCCHHHHhcccEEEccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCC
Q 000789 436 IDGIDIKKLQLKWIREKIGLVSQEPILFATSLRENIAYGKENATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLS 515 (1283)
Q Consensus 436 ~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LS 515 (1283)
+||+|+++++.+++|++|+||||+|++|++||+|||++++|+.++++++++++.+++++++.++|+|+||.+|++|.+||
T Consensus 394 i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~d~~i~~al~~~~l~~~i~~lp~gldt~i~~~g~~LS 473 (588)
T PRK13657 394 IDGTDIRTVTRASLRRNIAVVFQDAGLFNRSIEDNIRVGRPDATDEEMRAAAERAQAHDFIERKPDGYDTVVGERGRQLS 473 (588)
T ss_pred ECCEEhhhCCHHHHHhheEEEecCcccccccHHHHHhcCCCCCCHHHHHHHHHHhCHHHHHHhCcccccchhcCCCCCCC
Confidence 99999999999999999999999999999999999999998889999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhccCEEEEEeCCEEeEecCh
Q 000789 516 GGQKQRIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMTSRTTVVVAHRLTTIRNADLIAVVHQGKIVEKGTH 595 (1283)
Q Consensus 516 gGqkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~ 595 (1283)
|||||||+|||||+++|+|||||||||+||+++++.+.+.|+++.+++|+|+||||++.++.||+|++|++|++++.|+|
T Consensus 474 gGq~QRialARall~~~~iliLDEpts~LD~~t~~~i~~~l~~~~~~~tvIiitHr~~~~~~~D~ii~l~~G~i~~~g~~ 553 (588)
T PRK13657 474 GGERQRLAIARALLKDPPILILDEATSALDVETEAKVKAALDELMKGRTTFIIAHRLSTVRNADRILVFDNGRVVESGSF 553 (588)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhcCCEEEEEEecHHHHHhCCEEEEEECCEEEEeCCH
Confidence 99999999999999999999999999999999999999999998788999999999999999999999999999999999
Q ss_pred hHHhcCCCChhHHHHHHhh
Q 000789 596 DELIKDPEGPYTQLVRLQE 614 (1283)
Q Consensus 596 ~~l~~~~~~~~~~~~~~~~ 614 (1283)
++|++. ++.|++++..+.
T Consensus 554 ~~l~~~-~~~y~~l~~~~~ 571 (588)
T PRK13657 554 DELVAR-GGRFAALLRAQG 571 (588)
T ss_pred HHHHHC-CChHHHHHHHhh
Confidence 999987 789999987653
No 43
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=3.2e-80 Score=789.19 Aligned_cols=565 Identities=28% Similarity=0.398 Sum_probs=489.4
Q ss_pred HHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 706 RLAYLNKPEFPVLLIGSIAAGIHGVIFPIFGLLLSSSIRMFFEPEDKLRKDSRFWALIYLVLGIINLIAVPFQNYFFGVA 785 (1283)
Q Consensus 706 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~ 785 (1283)
+++...++.++.+...++++++..++....++++..+++......+ ......+..+++++.++..++.+++.++....
T Consensus 129 ~~~~~~~~~~~~~~~~~~~s~~~~ll~l~~p~~~~~iid~v~~~~~--~~~l~~l~~~~~~~~~~~~~~~~l~~~~~~~~ 206 (694)
T TIGR01846 129 WFIPAIIRYRKQFREVLLISLALQLFALVTPLLFQVVIDKVLVHRG--LSTLSVLALAMLAVAIFEPALGGLRTYLFAHL 206 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3433344444444444444444444444444555555554332111 11222334455566667788889999999999
Q ss_pred HHHHHHHHHHHHHHHHHcCCccccccCCCChhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Q 000789 786 GGKLIRRIRSLTFEKVVHQEISWFDDPANSSGSVGARLSTDASTIRSLVGDSLALVVQNIATIAAGLIIAFTANWILAFV 865 (1283)
Q Consensus 786 ~~~~~~~lr~~~~~~ll~~~~~ff~~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv 865 (1283)
+.++..++|.++|++++++|+.||++ +++|++++|+ +|++.+++++...+..++..++.+++.+++++.++|+++++
T Consensus 207 ~~~~~~~l~~~~~~~l~~l~~~~f~~--~~~g~~~~rl-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li 283 (694)
T TIGR01846 207 TSRIDVELGARLYRHLLGLPLGYFES--RRVGDTVARV-RELEQIRNFLTGSALTVVLDLLFVVVFLAVMFFYSPTLTGV 283 (694)
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHcCC--CCHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999995 8999999999 69999999988887777777777777788899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHhcHHHhHHHHHHHHHH
Q 000789 866 ILAVSPLMLVQGYTQTKFMKGFSADAKLMYEEASQVANDAVGSIRTVASFCSEEKVMDLYEKKCEGPLKNGVRRGILSGA 945 (1283)
Q Consensus 866 ~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 945 (1283)
+++++|++++..++..+..++..++..+...+..+.+.|++.|+++||+++.|+.+.++|.+..++..+...+.......
T Consensus 284 ~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (694)
T TIGR01846 284 VIGSLVCYALLSVFVGPILRKRVEDKFERSAAATSFLVESVTGIETIKATATEPQFQNRWDRQLAAYVAASFRVTNLGNI 363 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcccCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998888887777777777777778888899999999999999999999999999999999999988888888887
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCC
Q 000789 946 GFGFSFLVLYCTNAFCFYIGSVLVEHGKATFGQVFKVFFALTISALGVSQTSAMAPDTTKAKDSAASIFEILDSKPKIDS 1025 (1283)
Q Consensus 946 ~~~~~~~~~~~~~~~~~~~g~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~ 1025 (1283)
...+..++..+..++++++|.+++..|.+++|.++++..+...+..|+..+...+..++.+..+.+|+.++++.+++...
T Consensus 364 ~~~~~~~i~~~~~~~il~~g~~lv~~g~it~G~lia~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~ 443 (694)
T TIGR01846 364 AGQAIELIQKLTFAILLWFGAHLVIGGALSPGQLVAFNMLAGRVTQPVLRLAQLWQDFQQTGIALERLGDILNSPTEPRS 443 (694)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCccC
Confidence 77778888888888999999999999999999999999999999999999999999999999999999999987655332
Q ss_pred CCCcCCccCCCcccEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCcc
Q 000789 1026 SKDEGMTLSSVGGAIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIE 1105 (1283)
Q Consensus 1026 ~~~~~~~~~~~~g~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~d 1105 (1283)
. .....+...+.|+|+||+|+|++. ++++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|++||+|
T Consensus 444 ~--~~~~~~~~~~~i~~~~vsf~y~~~-~~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~p~~G~I~idg~~ 520 (694)
T TIGR01846 444 A--GLAALPELRGAITFENIRFRYAPD-SPEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTPQHGQVLVDGVD 520 (694)
T ss_pred C--CCCCCCCCCCeEEEEEEEEEcCCC-CccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEe
Confidence 1 111122345689999999999754 3569999999999999999999999999999999999999999999999999
Q ss_pred CCCCChHHHhcceEEEccCCCCChhhHHHHHhcCCCCCCCHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHH
Q 000789 1106 LPKFKLSWLRQQMGLVSQEPVLFNETIRTNIAYGKQGGATEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQK 1185 (1283)
Q Consensus 1106 i~~~~~~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQr 1185 (1283)
+++++.+++|++|+||||||.+|++||+|||.++. +++++++++++++.++++++++++|+||||.+|++|.+||||||
T Consensus 521 i~~~~~~~~r~~i~~v~q~~~lf~~ti~eNi~~~~-~~~~~~~i~~a~~~~~l~~~i~~lp~gl~t~i~~~g~~LSgGq~ 599 (694)
T TIGR01846 521 LAIADPAWLRRQMGVVLQENVLFSRSIRDNIALCN-PGAPFEHVIHAAKLAGAHDFISELPQGYNTEVGEKGANLSGGQR 599 (694)
T ss_pred hhhCCHHHHHHhCeEEccCCeehhhhHHHHHhcCC-CCCCHHHHHHHHHHcChHHHHHhCcCccCcEecCCCCCCCHHHH
Confidence 99999999999999999999999999999999974 46899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcCCceEEEEecCchHHhhcCEEEEEeCCEEEEecChHHHH
Q 000789 1186 QRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALM 1265 (1283)
Q Consensus 1186 QRlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~~D~I~vl~~G~Ive~Gt~~eLl 1265 (1283)
|||+||||++++|+|||||||||+||+++|+.+.+.|++..+++|+|+||||+++++.||+|++|++|+|+|.|+|+||+
T Consensus 600 qri~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~ii~l~~G~i~~~g~~~~l~ 679 (694)
T TIGR01846 600 QRIAIARALVGNPRILIFDEATSALDYESEALIMRNMREICRGRTVIIIAHRLSTVRACDRIIVLEKGQIAESGRHEELL 679 (694)
T ss_pred HHHHHHHHHHhCCCEEEEECCCcCCCHHHHHHHHHHHHHHhCCCEEEEEeCChHHHHhCCEEEEEeCCEEEEeCCHHHHH
Confidence 99999999999999999999999999999999999999988899999999999999999999999999999999999999
Q ss_pred hccCchhHHHHHHhh
Q 000789 1266 KITDGAYASLVALHV 1280 (1283)
Q Consensus 1266 ~~~~g~y~~L~~~~~ 1280 (1283)
++ +|.|++|++.|.
T Consensus 680 ~~-~~~y~~l~~~~~ 693 (694)
T TIGR01846 680 AL-QGLYARLWQQQS 693 (694)
T ss_pred Hc-CChHHHHHHhhc
Confidence 96 899999998763
No 44
>TIGR01192 chvA glucan exporter ATP-binding protein. This model describes glucan exporter ATP binding protein in bacteria. It belongs to the larger ABC transporter superfamily with the characteristic ATP binding motif. The In general, this protein is in some ways implicated in osmoregulation and suggested to participate in the export of glucan from the cytoplasm to periplasm. The cyclic beta-1,2-glucan in the bactrerial periplasmic space is suggested to confer the property of high osmolority. It has also been demonstrated that mutants in this loci have lost functions of virulence and motility. It is unclear as to how virulence and osmoadaptaion are related.
Probab=100.00 E-value=9.3e-80 Score=767.43 Aligned_cols=565 Identities=27% Similarity=0.370 Sum_probs=490.4
Q ss_pred hHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 37 PFYKLFAFADKQDAVLMIVGTISAIGSGLAHPFMTLIFGHLINSFGSSDRSHVVHEVSKVAVKFLYLAAGTGIAAFLQVS 116 (1283)
Q Consensus 37 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (1283)
.+++++++.+++++ .++++++++++..++.+..|++++.++|.+...+. . . ...+.++++.++..+..++..+
T Consensus 6 ~~~~l~~~l~~~k~-~~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~--~---~-~~~~~~~~~~~~~~~~~~~~~~ 78 (585)
T TIGR01192 6 VYVRALSYLNVHKN-RVLLIVIANITLAAITIAEPILFGRIIDAISSKSD--V---L-PTLALWAGFGVFNTIAYVLVAR 78 (585)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc--H---H-HHHHHHHHHHHHHHHHHHHHHH
Confidence 35677788777644 45677777888888888999999999997643221 0 1 1111112223333444445455
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCccHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Q 000789 117 CWMVTGERQATRIRGLYLKTILRQDIGFFDTETTTGEVIGRMSGDTILIQEAMGEKVGKFIQLMSTFFGGFVVALARGWF 196 (1283)
Q Consensus 117 ~~~~~~~~~~~~lR~~~~~~ll~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 196 (1283)
+....+.++..++|.++|+|++++|++||+++ ++|++++|+++|++.+++.+...+..++..++.+++.+++++.++|.
T Consensus 79 ~~~~~~~~~~~~lr~~~~~~l~~l~~~~~~~~-~~g~~~s~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 157 (585)
T TIGR01192 79 EADRLAHGRRATLLTEAFGRIISMPLSWHQQR-GTSNALHTLLRATETLFGLWLEFMRQHLATFVALFLLIPTAFAMDWR 157 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCC-ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55556666666777899999999999999976 89999999999999999998888888888888888888889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 197 LALVLLACLPAIVIAGGSMALIMSKMSSRGQIAYSEAGTVVEQTVSGIRTVSSFTGEKQAIEKYNNKLQVAYRAAVQQGM 276 (1283)
Q Consensus 197 l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 276 (1283)
+++++++++|+++++..++.++.++..++.++..++..+.+.|.++|+++||+|+.|+.+.+++.+..++..+...+..+
T Consensus 158 l~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (585)
T TIGR01192 158 LSIVLMVLGILYILIAKLVMQRTKNGQAAVEHHYHNVFKHVSDSISNVSVVHSYNRIEAETSALKQFTNNLLSAQYPVLD 237 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999888888899999999999999999999999999999999999999988888777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC
Q 000789 277 VSGIGLGVLMLTVIGTYGLAVWYGSKLIIEKGYNGGTVINVIMAIMTGGMSLGQTSPCLNAFAGGQAAAYKMFETIKRKP 356 (1283)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~t~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~ 356 (1283)
..++...+..++..+..++++++|++++.+|.+++|.+++++.++.....|+.++...+..++.+..+.+|+.++++.++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~v~~~g~~~v~~g~it~g~l~a~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~ri~~~~~~~~ 317 (585)
T TIGR01192 238 WWALASGLNRMASTISMMCILVIGTVLVIKGELSVGEVIAFIGFANLLIGRLDQMSGFITQIFEARAKLEDFFDLEDSVF 317 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCc
Confidence 77777776666777777788899999999999999999999999888889999999999999999999999999998655
Q ss_pred CCCCCCCCCCcccCccccEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEE
Q 000789 357 KIDPYDTSGITLEKIEGEIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLI 436 (1283)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~ 436 (1283)
+.++.. .....+...+.|+++||+|+|+++ .++|+|+||++++||++||+||||||||||+++|+|+|+|++|+|.+
T Consensus 318 ~~~~~~-~~~~~~~~~~~i~~~~v~~~y~~~--~~~l~~i~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~ 394 (585)
T TIGR01192 318 QREEPA-DAPELPNVKGAVEFRHITFEFANS--SQGVFDVSFEAKAGQTVAIVGPTGAGKTTLINLLQRVYDPTVGQILI 394 (585)
T ss_pred cccCCc-cCCCCCCCCCeEEEEEEEEECCCC--CccccceeEEEcCCCEEEEECCCCCCHHHHHHHHccCCCCCCCEEEE
Confidence 432211 111112234579999999999743 35899999999999999999999999999999999999999999999
Q ss_pred CCcccCCCCHHHHhcccEEEccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCCh
Q 000789 437 DGIDIKKLQLKWIREKIGLVSQEPILFATSLRENIAYGKENATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSG 516 (1283)
Q Consensus 437 ~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSg 516 (1283)
||+|+++++.+++|++++||+|+|++|++|++|||.++.++.++++++++++.+++++++.++|+|++|.+|++|.+|||
T Consensus 395 ~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~a~~~~~~~~~i~~l~~g~~t~~~~~~~~LSg 474 (585)
T TIGR01192 395 DGIDINTVTRESLRKSIATVFQDAGLFNRSIRENIRLGREGATDEEVYEAAKAAAAHDFILKRSNGYDTLVGERGNRLSG 474 (585)
T ss_pred CCEEhhhCCHHHHHhheEEEccCCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhccccccchhcCCCCCCCH
Confidence 99999999999999999999999999999999999999888899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhccCEEEEEeCCEEeEecChh
Q 000789 517 GQKQRIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMTSRTTVVVAHRLTTIRNADLIAVVHQGKIVEKGTHD 596 (1283)
Q Consensus 517 GqkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~~ 596 (1283)
||||||+|||||+++|++||||||||+||+++++.+.+.|.++.+++|+|+||||+++++.||+|++|++|++++.|+|+
T Consensus 475 Gq~qrl~lARall~~p~ililDEpts~LD~~~~~~i~~~l~~~~~~~tvI~isH~~~~~~~~d~i~~l~~G~i~~~g~~~ 554 (585)
T TIGR01192 475 GERQRLAIARAILKNAPILVLDEATSALDVETEARVKNAIDALRKNRTTFIIAHRLSTVRNADLVLFLDQGRLIEKGSFQ 554 (585)
T ss_pred HHHHHHHHHHHHhcCCCEEEEECCccCCCHHHHHHHHHHHHHHhCCCEEEEEEcChHHHHcCCEEEEEECCEEEEECCHH
Confidence 99999999999999999999999999999999999999999988899999999999999999999999999999999999
Q ss_pred HHhcCCCChhHHHHHHh
Q 000789 597 ELIKDPEGPYTQLVRLQ 613 (1283)
Q Consensus 597 ~l~~~~~~~~~~~~~~~ 613 (1283)
+++++ ++.|++++..+
T Consensus 555 ~l~~~-~~~y~~l~~~~ 570 (585)
T TIGR01192 555 ELIQK-DGRFYKLLRRS 570 (585)
T ss_pred HHHHC-CChHHHHHHhC
Confidence 99987 78999998765
No 45
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit. The gene pair cydCD encodes an ABC-family transporter in which each gene contains an N-terminal membrane-spanning domain (pfam00664) and a C-terminal ATP-binding domain (pfam00005). In E. coli these genes were discovered as mutants which caused the terminal heme-copper oxidase complex cytochrome bd to fail to assemble. Recent work has shown that the transporter is involved in export of redox-active thiol compounds such as cysteine and glutathione. The linkage to assembly of the cytochrome bd complex is further supported by the conserved operon structure found outside the gammaproteobacteria (cydABCD) containing both the transporter and oxidase genes components. The genes used as the seed members for this model are all either found in the gammproteobacterial context or the CydABCD context. All members of this family scoring above trusted at the time of its creation were from genomes which encode a cytochrome bd complex.
Probab=100.00 E-value=1.7e-80 Score=770.16 Aligned_cols=525 Identities=24% Similarity=0.321 Sum_probs=454.0
Q ss_pred HHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 40 KLFAFADKQDAVLMIVGTISAIGSGLAHPFMTLIFGHLINSFGSSDRSHVVHEVSKVAVKFLYLAAGTGIAAFLQVSCWM 119 (1283)
Q Consensus 40 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (1283)
+++++.+++++ .+++.+++.++.+++....|+++++++|.....+. . . ......+.++++.++..++.++..++..
T Consensus 3 ~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~-~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (529)
T TIGR02868 3 RILPLLQPRTR-RLVVAILLGALALGSAVALLGVSAWLISRAAEMPP-V-L-YLSVAAVAVRAFGIGRAVFRYLERLVGH 78 (529)
T ss_pred hHHHHHHhhHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcch-h-H-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45666666544 44566677777777888888999999997643211 0 0 0111111122344556677888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHhCChhhHhccCCccHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Q 000789 120 VTGERQATRIRGLYLKTILRQDIGFFDTETTTGEVIGRMSGDTILIQEAMGEKVGKFIQLMSTFFGGFVVALARGWFLAL 199 (1283)
Q Consensus 120 ~~~~~~~~~lR~~~~~~ll~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~l 199 (1283)
..+.++..++|.++|+|++++|.++|++. ++|++++|+++|++.+++.+...+..++..+..+++.++++++++|.+++
T Consensus 79 ~~~~~~~~~lr~~~~~~ll~~~~~~~~~~-~~g~~~~~l~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l 157 (529)
T TIGR02868 79 DAALRSLGRLRVRVYDRLARLALAGRRRF-QTGDLLGRLGADVDALQDLYVRVIVPLVVALVVGSAAVAAIALLSVPAAL 157 (529)
T ss_pred HHHHHHHHHHHHHHHHHhhccCccccccC-ChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 99999999999999999999999999876 99999999999999999999988888899988889999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 200 VLLACLPAIVIAGGSMALI-MSKMSSRGQIAYSEAGTVVEQTVSGIRTVSSFTGEKQAIEKYNNKLQVAYRAAVQQGMVS 278 (1283)
Q Consensus 200 ~~l~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (1283)
++++.+|++.++...+.++ .++..++.++..++.++.+.|.++|+++||+|++|+.+.++|++..++..+...+..+..
T Consensus 158 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (529)
T TIGR02868 158 VLAAGLLLAGFVAPLVSLRAARAAEVALARLRSQLYQQLTDALDGAADLVAYGALDPALAQVEAADRELLAAERRAARAT 237 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHhccHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9888888876665444444 455667778888999999999999999999999999999999999999999988888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCC
Q 000789 279 GIGLGVLMLTVIGTYGLAVWYGSKLIIEKGYNGGTVINVIMAIMTGGMSLGQTSPCLNAFAGGQAAAYKMFETIKRKPKI 358 (1283)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~t~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~ 358 (1283)
+...++..++..+..++++++|++++.+|.+++|.+++++++......|+..+...+..++++.++.+|+.++++.+++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~t~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~ 317 (529)
T TIGR02868 238 GLGAAAQLLAAGLAVLGALWAGGPAVADGTLAPATLAVLVLLPLAAFEAFAPLPAAAQALTRVRAAAERIEEVTGAKGPR 317 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 88887777777778888889999999999999999999999888888899999889999999999999999999876543
Q ss_pred CCCCCC-CCcccCccccEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEEC
Q 000789 359 DPYDTS-GITLEKIEGEIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLID 437 (1283)
Q Consensus 359 ~~~~~~-~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~ 437 (1283)
+..... .....+..+.|+|+||+|+|+++ +++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|.+|
T Consensus 318 ~~~~~~~~~~~~~~~~~I~~~~vsf~Y~~~--~~vL~~isl~i~~G~~vaIvG~SGsGKSTLl~lL~g~~~p~~G~I~i~ 395 (529)
T TIGR02868 318 PEGVVPAAGALGLGKPTLELRDLSFGYPGS--PPVLDGVSLDLPPGERVAILGPSGSGKSTLLMLLTGLLDPLQGEVTLD 395 (529)
T ss_pred CCCCCCCCcccCCCCceEEEEEEEEecCCC--CceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEC
Confidence 221110 01111234579999999999753 369999999999999999999999999999999999999999999999
Q ss_pred CcccCCCCHHHHhcccEEEccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChH
Q 000789 438 GIDIKKLQLKWIREKIGLVSQEPILFATSLRENIAYGKENATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGG 517 (1283)
Q Consensus 438 g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgG 517 (1283)
|+|++++ .+++|++|+||||+|++|++||+|||++|.|++++++++++++.+++++|+.++|+||||.+||+|.+||||
T Consensus 396 g~~i~~~-~~~lr~~i~~V~Q~~~lF~~TI~eNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSGG 474 (529)
T TIGR02868 396 GVSVSSL-QDELRRRISVFAQDAHLFDTTVRDNLRLGRPDATDEELWAALERVGLADWLRSLPDGLDTVLGEGGARLSGG 474 (529)
T ss_pred CEEhhhH-HHHHHhheEEEccCcccccccHHHHHhccCCCCCHHHHHHHHHHcCCHHHHHhCcccccchhccccCcCCHH
Confidence 9999999 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCc
Q 000789 518 QKQRIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMTSRTTVVVAHRL 572 (1283)
Q Consensus 518 qkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l 572 (1283)
||||||||||++++|+|||||||||+||+++|+.|++.+.++.+++|+|+||||+
T Consensus 475 QrQRiaiARall~~~~iliLDE~TSaLD~~te~~I~~~l~~~~~~~TvIiItHrl 529 (529)
T TIGR02868 475 ERQRLALARALLADAPILLLDEPTEHLDAGTESELLEDLLAALSGKTVVVITHHL 529 (529)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEecCC
Confidence 9999999999999999999999999999999999999999988899999999996
No 46
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.2e-80 Score=704.86 Aligned_cols=513 Identities=30% Similarity=0.450 Sum_probs=445.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChhHHHHHHhhhHHHHHHHHHHHH
Q 000789 759 FWALIYLVLGIINLIAVPFQNYFFGVAGGKLIRRIRSLTFEKVVHQEISWFDDPANSSGSVGARLSTDASTIRSLVGDSL 838 (1283)
Q Consensus 759 ~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~ff~~~~~~~G~l~~rl~~D~~~i~~~~~~~l 838 (1283)
..+..|++..+...++..++...+.++.+++.+..-.+.|++++.++.+||.+ ..+|.+.+.+.+-...+...+...+
T Consensus 75 ~~~~~y~iar~~s~~F~el~~~vfa~v~q~~iR~~~~~vf~~~~~ld~~~~~~--~~tG~l~~~idRgsraI~~vl~~~V 152 (591)
T KOG0057|consen 75 ALLAGYGIARLGSSVFNELRNFVFAKVAQRVIRDSSSDVFRHLMSLDLSFFLS--RGTGALNRIIDRGSRAISFVLSAMV 152 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHhhcC--CCcchHHHHHHhhhhHHHHHHHHHH
Confidence 35667888888999999999999999999999999999999999999999986 6789999999888888888887777
Q ss_pred HHHHHHHHHHHHHHHH-HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhcc
Q 000789 839 ALVVQNIATIAAGLII-AFTANWILAFVILAVSPLMLVQGYTQTKFMKGFSADAKLMYEEASQVANDAVGSIRTVASFCS 917 (1283)
Q Consensus 839 ~~~~~~~~~~~~~~~~-~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~ 917 (1283)
..++..++.+...... ..-.....+++.+..+..+..+.+....+..+..++...++..+.+.+.|++.+.++||+||.
T Consensus 153 ~~i~p~~~~i~~v~~~l~~~~Ga~~~li~~~~v~~Y~a~Ti~~t~~Rn~fR~~~N~Adn~as~~~~dsL~Nye~VKsfNn 232 (591)
T KOG0057|consen 153 FNIIPTLFEIALVSGILYYKFGAAFALITLGTVGAYAAFTIVVTRWRNRFRKAMNNADNSASRRAYDSLINYEIVKSFNN 232 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHhheeEEeehhHHHHHHHHHHhhhhHHHHHHHHHHhhHHHHHHccc
Confidence 7777766655444433 333556666666666666666666666666666777888888999999999999999999999
Q ss_pred HHHHHHHHHHHHhcHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHH
Q 000789 918 EEKVMDLYEKKCEGPLKNGVRRGILSGAGFGFSFLVLYCTNAFCFYIGSVLVEHGKATFGQVFKVFFALTISALGVSQTS 997 (1283)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 997 (1283)
|++..++|...+.++.+...+.....+........+.....+.+.+.+..-+.+|.++++++..+.....+...|+..+.
T Consensus 233 E~~Ea~~y~~~l~~~~~~~~~~~~sl~~lnfgQ~~iFsv~~~~im~l~~~gi~~~~mtvgdlv~~n~l~~qL~~~l~~Lg 312 (591)
T KOG0057|consen 233 EEYEASRYDGSLKTYERAGLKYSSSLAFLNFGQKAIFSVALTFIMVLGSNGIAAGKMTVGDLVMVNSLLFQLSLPLNFLG 312 (591)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccccccchhhHHHHHHHHHhHHHHHH
Confidence 99999999999999888877765555544444445555666677777777788999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCCCCCCcCCccCCCcccEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCC
Q 000789 998 AMAPDTTKAKDSAASIFEILDSKPKIDSSKDEGMTLSSVGGAIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGES 1077 (1283)
Q Consensus 998 ~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~S 1077 (1283)
..+.++.++..-+..++.+.+....+... ..+....++.|+|+||+|.|++ ++++|+++||+|++||||||||+|
T Consensus 313 ~vyr~~~q~l~Dm~~~~~l~~~~~~i~~~---~~~i~~~~~~I~F~dV~f~y~~--k~~iL~gvsf~I~kGekVaIvG~n 387 (591)
T KOG0057|consen 313 SVYRELRQALTDMRTLFILLEVDEDIQEA---ALPIELFGGSIEFDDVHFSYGP--KRKVLKGVSFTIPKGEKVAIVGSN 387 (591)
T ss_pred HHHHHHHHHHHhHHHHHhhhhhhhhhhhc---cCCcccCCCcEEEEeeEEEeCC--CCceecceeEEecCCCEEEEECCC
Confidence 99999988888877776654432222111 1122335678999999999984 457999999999999999999999
Q ss_pred CCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHhcceEEEccCCCCChhhHHHHHhcCCCCCCCHHHHHHHHHHhC
Q 000789 1078 GSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMGLVSQEPVLFNETIRTNIAYGKQGGATEEEIIAATEASN 1157 (1283)
Q Consensus 1078 GSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~ 1157 (1283)
||||||++++|+||+| ++|+|+|||+|+++++++++|+.|||||||..||++||.+||.||+ +.+++||+.++||+++
T Consensus 388 GsGKSTilr~LlrF~d-~sG~I~IdG~dik~~~~~SlR~~Ig~VPQd~~LFndTIl~NI~YGn-~sas~eeV~e~~k~a~ 465 (591)
T KOG0057|consen 388 GSGKSTILRLLLRFFD-YSGSILIDGQDIKEVSLESLRQSIGVVPQDSVLFNDTILYNIKYGN-PSASDEEVVEACKRAG 465 (591)
T ss_pred CCCHHHHHHHHHHHhc-cCCcEEECCeeHhhhChHHhhhheeEeCCcccccchhHHHHhhcCC-CCcCHHHHHHHHHHcC
Confidence 9999999999999999 9999999999999999999999999999999999999999999994 5799999999999999
Q ss_pred hHHHHHhCCCCcccccCCCCCCCChhHHHHHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcCCceEEEEecC
Q 000789 1158 AHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHR 1237 (1283)
Q Consensus 1158 l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHr 1237 (1283)
+||.|.++|+||+|.|||+|..||||||||++||||+|++|+|++||||||+||.+||+.|.+++.....++|+|+|+||
T Consensus 466 ~hd~i~~l~~GY~T~VGerG~~LSGGekQrvslaRa~lKda~Il~~DEaTS~LD~~TE~~i~~~i~~~~~~rTvI~IvH~ 545 (591)
T KOG0057|consen 466 LHDVISRLPDGYQTLVGERGLMLSGGEKQRVSLARAFLKDAPILLLDEATSALDSETEREILDMIMDVMSGRTVIMIVHR 545 (591)
T ss_pred cHHHHHhccccchhhHhhcccccccchHHHHHHHHHHhcCCCeEEecCcccccchhhHHHHHHHHHHhcCCCeEEEEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999998899999999999
Q ss_pred chHHhhcCEEEEEeCCEEEEecChHHHHhccCchhHHHHHHhhc
Q 000789 1238 LTTIKNADIIAVVKNGVIAEQGSHDALMKITDGAYASLVALHVS 1281 (1283)
Q Consensus 1238 l~ti~~~D~I~vl~~G~Ive~Gt~~eLl~~~~g~y~~L~~~~~~ 1281 (1283)
++++++||+|++|++|+++|+|+|+||++ +.+.|+++|..|..
T Consensus 546 l~ll~~~DkI~~l~nG~v~e~gth~ell~-~s~~~~~~w~~~~~ 588 (591)
T KOG0057|consen 546 LDLLKDFDKIIVLDNGTVKEYGTHSELLA-PSELYADLWTTQTS 588 (591)
T ss_pred chhHhcCCEEEEEECCeeEEeccHHHHhh-hhhHHHHHhccccc
Confidence 99999999999999999999999999999 59999999988754
No 47
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=1.1e-79 Score=766.17 Aligned_cols=544 Identities=25% Similarity=0.366 Sum_probs=477.8
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChh
Q 000789 64 GLAHPFMTLIFGHLINSFGSSDRSHVVHEVSKVAVKFLYLAAGTGIAAFLQVSCWMVTGERQATRIRGLYLKTILRQDIG 143 (1283)
Q Consensus 64 ~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~~~~~ll~~~~~ 143 (1283)
.++....|++++.++|.+...... ......++..++++.++..++.++..++....+.++..++|.++|++++++|++
T Consensus 8 ~~~~~~~p~~~~~iid~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ 85 (569)
T PRK10789 8 AMLQLIPPKVVGIIVDGVTEQHMT--TGQILMWIGTMVLIAVVVYLLRYVWRVLLFGASYQLAVELREDFYRQLSRQHPE 85 (569)
T ss_pred HHHHHHHHHHHHHHHHHhccCCcc--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHH
Confidence 344455677899999976432111 011222233333444556667788788888899999999999999999999999
Q ss_pred hHhccCCccHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 144 FFDTETTTGEVIGRMSGDTILIQEAMGEKVGKFIQLMSTFFGGFVVA-LARGWFLALVLLACLPAIVIAGGSMALIMSKM 222 (1283)
Q Consensus 144 ~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~ 222 (1283)
+|++. ++|++++|+++|++.++..+...+..++..++.+++.++++ ++++|.+++++++++|+++++...+.++.++.
T Consensus 86 ~~~~~-~~g~i~srl~~Dv~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li~l~~~~l~~~~~~~~~~~~~~~ 164 (569)
T PRK10789 86 FYLRH-RTGDLMARATNDVDRVVFAAGEGVLTLVDSLVMGCAVLIVMSTQISWQLTLLALLPMPVMAIMIKRYGDQLHER 164 (569)
T ss_pred HHcCC-CHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99876 89999999999999999888777777887766666665555 58999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 223 SSRGQIAYSEAGTVVEQTVSGIRTVSSFTGEKQAIEKYNNKLQVAYRAAVQQGMVSGIGLGVLMLTVIGTYGLAVWYGSK 302 (1283)
Q Consensus 223 ~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 302 (1283)
.++.++..++.++.+.|.++|+++||+|+.|+.+.++|.+..++..+...+..+..+...++...+..++.++++++|++
T Consensus 165 ~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~ 244 (569)
T PRK10789 165 FKLAQAAFSSLNDRTQESLTSIRMIKAFGLEDRQSALFAADAEDTGKKNMRVARIDARFDPTIYIAIGMANLLAIGGGSW 244 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999888888888887777776666666777778889999
Q ss_pred HHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCCcccCccccEEEEEEEE
Q 000789 303 LIIEKGYNGGTVINVIMAIMTGGMSLGQTSPCLNAFAGGQAAAYKMFETIKRKPKIDPYDTSGITLEKIEGEIELRDVYF 382 (1283)
Q Consensus 303 ~v~~~~~t~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f 382 (1283)
++.+|.+|+|.+++++.+......|+..+...+..++++.++.+|+.++++.+++.++.. ...+..++.|+++||+|
T Consensus 245 lv~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~ll~~~~~~~~~~---~~~~~~~~~I~~~~v~~ 321 (569)
T PRK10789 245 MVVNGSLTLGQLTSFVMYLGLMIWPMLALAWMFNIVERGSAAYSRIRAMLAEAPVVKDGS---EPVPEGRGELDVNIRQF 321 (569)
T ss_pred HHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCC---CCCCCCCCcEEEEEEEE
Confidence 999999999999999999998899999999999999999999999999998765432211 11222346799999999
Q ss_pred ECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHHhcccEEEccCCCC
Q 000789 383 RYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWIREKIGLVSQEPIL 462 (1283)
Q Consensus 383 ~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l 462 (1283)
+|++. +.++|+|+||+++||++++|+||||||||||+++|+|+|+|++|+|.+||+++++++..++|++|+||+|+|++
T Consensus 322 ~y~~~-~~~~l~~i~~~i~~G~~~~ivG~sGsGKSTLl~ll~g~~~p~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~l 400 (569)
T PRK10789 322 TYPQT-DHPALENVNFTLKPGQMLGICGPTGSGKSTLLSLIQRHFDVSEGDIRFHDIPLTKLQLDSWRSRLAVVSQTPFL 400 (569)
T ss_pred ECCCC-CCccccCeeEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEHhhCCHHHHHhheEEEccCCee
Confidence 99753 34799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCC
Q 000789 463 FATSLRENIAYGKENATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARAILKNPKILLLDEATS 542 (1283)
Q Consensus 463 ~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARal~~~~~illlDE~ts 542 (1283)
|++|++|||+++.++.++++++++++.+++++++.++|+|+||.+|++|.+||||||||++||||++++|+|||||||||
T Consensus 401 f~~ti~~Ni~~~~~~~~~~~~~~~~~~~~l~~~i~~lp~gl~t~~~~~g~~LSgGq~qRi~lARall~~~~illlDEpts 480 (569)
T PRK10789 401 FSDTVANNIALGRPDATQQEIEHVARLASVHDDILRLPQGYDTEVGERGVMLSGGQKQRISIARALLLNAEILILDDALS 480 (569)
T ss_pred ccccHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCcCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEECccc
Confidence 99999999999988889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhccCEEEEEeCCEEeEecChhHHhcCCCChhHHHHHHhhc
Q 000789 543 ALDAESERIVQDALVKIMTSRTTVVVAHRLTTIRNADLIAVVHQGKIVEKGTHDELIKDPEGPYTQLVRLQEG 615 (1283)
Q Consensus 543 ~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~ 615 (1283)
+||+++++.+.+.|+++.+++|+|+||||+++++.||+|++|++|++++.|+|++++++ ++.|++++..|..
T Consensus 481 ~LD~~~~~~i~~~l~~~~~~~tii~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~-~~~y~~l~~~~~~ 552 (569)
T PRK10789 481 AVDGRTEHQILHNLRQWGEGRTVIISAHRLSALTEASEILVMQHGHIAQRGNHDQLAQQ-SGWYRDMYRYQQL 552 (569)
T ss_pred cCCHHHHHHHHHHHHHHhCCCEEEEEecchhHHHcCCEEEEEeCCEEEEecCHHHHHHc-CChHHHHHHHhhh
Confidence 99999999999999998889999999999999999999999999999999999999987 7899999987644
No 48
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=3e-79 Score=767.79 Aligned_cols=563 Identities=33% Similarity=0.511 Sum_probs=501.2
Q ss_pred HHhhcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 708 AYLNKPEFPVLLIGSIAAGIHGVIFPIFGLLLSSSIRMFFEPEDKLRKDSRFWALIYLVLGIINLIAVPFQNYFFGVAGG 787 (1283)
Q Consensus 708 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~ 787 (1283)
+.+.++.++.++++.+++.+.+++.+..++.+...++..+... .......+..+++++.++..++.+++.++....+.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 83 (571)
T TIGR02203 6 WSYVRPYKAGLVLAGVAMILVAATESTLAALLKPLLDDGFGGR--DRSVLWWVPLVVIGLAVLRGICSFVSTYLLSWVSN 83 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccC--chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344455666666777777767776666666666555433211 11112223445666777788888999999999999
Q ss_pred HHHHHHHHHHHHHHHcCCccccccCCCChhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 000789 788 KLIRRIRSLTFEKVVHQEISWFDDPANSSGSVGARLSTDASTIRSLVGDSLALVVQNIATIAAGLIIAFTANWILAFVIL 867 (1283)
Q Consensus 788 ~~~~~lr~~~~~~ll~~~~~ff~~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~l 867 (1283)
++...+|..+|+++++.|.++|++ .++|++.+|+++|++.+++++...+..++..++.++++++++++++|+++++++
T Consensus 84 ~~~~~lr~~l~~~~~~~~~~~~~~--~~~g~~~~~l~~di~~i~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~l~~i~l 161 (571)
T TIGR02203 84 KVVRDIRVRMFEKLLGLPVSFFDR--QPTGTLLSRITFDSEQVASAATDAFIVLVRETLTVIGLFIVLLYYSWQLTLIVV 161 (571)
T ss_pred HHHHHHHHHHHHHHHcCCHHHhCC--CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 999999999999999999999985 789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHhcHHHhHHHHHHHHHHHH
Q 000789 868 AVSPLMLVQGYTQTKFMKGFSADAKLMYEEASQVANDAVGSIRTVASFCSEEKVMDLYEKKCEGPLKNGVRRGILSGAGF 947 (1283)
Q Consensus 868 ~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 947 (1283)
++.|++++..++..+..++...+..+...+..+.+.|.+.|+++||+++.++.+.++|.+..++..+...+.....+...
T Consensus 162 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (571)
T TIGR02203 162 VMLPVLSILMRRVSKRLRRISKEIQNSMGQVTTVAEETLQGYRVVKLFGGQAYETRRFDAVSNRNRRLAMKMTSAGSISS 241 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998888888888888888888999999999999999999999999999999999999999998888888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCC
Q 000789 948 GFSFLVLYCTNAFCFYIGSVLVEHGKATFGQVFKVFFALTISALGVSQTSAMAPDTTKAKDSAASIFEILDSKPKIDSSK 1027 (1283)
Q Consensus 948 ~~~~~~~~~~~~~~~~~g~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~ 1027 (1283)
.+...+..+..++++++|++++..|.+++|.++++..+...+..|+..+......+..++.+.+|+.++++.+++.+...
T Consensus 242 ~~~~~~~~~~~~~~~~~g~~~~~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~ 321 (571)
T TIGR02203 242 PITQLIASLALAVVLFIALFQAQAGSLTAGDFTAFITAMIALIRPLKSLTNVNAPMQRGLAAAESLFTLLDSPPEKDTGT 321 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCC
Confidence 88888888888899999999999999999999999999999999999999999999999999999999998665432211
Q ss_pred CcCCccCCCcccEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCC
Q 000789 1028 DEGMTLSSVGGAIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELP 1107 (1283)
Q Consensus 1028 ~~~~~~~~~~g~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~ 1107 (1283)
.+.+...+.|+++||+|+|+++ +.++|+|+||+|+|||+++|+|+||||||||+++|+|+|+|++|+|++||+|++
T Consensus 322 ---~~~~~~~~~i~~~~v~f~y~~~-~~~il~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~~~~G~I~i~g~~i~ 397 (571)
T TIGR02203 322 ---RAIERARGDVEFRNVTFRYPGR-DRPALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEPDSGQILLDGHDLA 397 (571)
T ss_pred ---CCCCCCCCeEEEEEEEEEcCCC-CCccccCeeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEeHH
Confidence 1112234679999999999854 457999999999999999999999999999999999999999999999999999
Q ss_pred CCChHHHhcceEEEccCCCCChhhHHHHHhcCCCCCCCHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHH
Q 000789 1108 KFKLSWLRQQMGLVSQEPVLFNETIRTNIAYGKQGGATEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQR 1187 (1283)
Q Consensus 1108 ~~~~~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQR 1187 (1283)
+++.+++|++++||||+|++|+|||||||.++++++.++++++++++.+++++++.++|+|+||.+||+|.+||||||||
T Consensus 398 ~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~~l~~~~l~~~i~~lp~gldt~i~~~g~~LSgGqrQR 477 (571)
T TIGR02203 398 DYTLASLRRQVALVSQDVVLFNDTIANNIAYGRTEQADRAEIERALAAAYAQDFVDKLPLGLDTPIGENGVLLSGGQRQR 477 (571)
T ss_pred hcCHHHHHhhceEEccCcccccccHHHHHhcCCCCCCCHHHHHHHHHHcChHHHHHhCcCcccceecCCCCcCCHHHHHH
Confidence 99999999999999999999999999999998544799999999999999999999999999999999999999999999
Q ss_pred HHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcCCceEEEEecCchHHhhcCEEEEEeCCEEEEecChHHHHhc
Q 000789 1188 IAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALMKI 1267 (1283)
Q Consensus 1188 laiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~~D~I~vl~~G~Ive~Gt~~eLl~~ 1267 (1283)
||||||++++|+|||||||||+||+++|+.|.+.|++..+++|+|+||||++.+..||+|++|++|++++.|+|++|+++
T Consensus 478 iaLARall~~~~illLDEpts~LD~~~~~~i~~~L~~~~~~~tiIiitH~~~~~~~~D~ii~l~~g~i~~~g~~~~l~~~ 557 (571)
T TIGR02203 478 LAIARALLKDAPILILDEATSALDNESERLVQAALERLMQGRTTLVIAHRLSTIEKADRIVVMDDGRIVERGTHNELLAR 557 (571)
T ss_pred HHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHhCCCEEEEEehhhHHHHhCCEEEEEeCCEEEeeCCHHHHHHc
Confidence 99999999999999999999999999999999999999889999999999999999999999999999999999999986
Q ss_pred cCchhHHHHHHh
Q 000789 1268 TDGAYASLVALH 1279 (1283)
Q Consensus 1268 ~~g~y~~L~~~~ 1279 (1283)
++.|++++..+
T Consensus 558 -~~~~~~~~~~~ 568 (571)
T TIGR02203 558 -NGLYAQLHNMQ 568 (571)
T ss_pred -CCHHHHHHHHh
Confidence 88999998865
No 49
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.7e-79 Score=695.42 Aligned_cols=505 Identities=26% Similarity=0.340 Sum_probs=435.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChhHHHHHHhhhHHHHHHHHHHHHHHHHHHH
Q 000789 766 VLGIINLIAVPFQNYFFGVAGGKLIRRIRSLTFEKVVHQEISWFDDPANSSGSVGARLSTDASTIRSLVGDSLALVVQNI 845 (1283)
Q Consensus 766 ~l~~~~~l~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~ff~~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~~ 845 (1283)
++++...+..+.+....+.+..++...+|.++|+++...+..-... ..+|++++|+..|++.+|+.+-..+...+..+
T Consensus 66 ~~aI~Rt~~RY~ERlvsH~AtfrvL~~lRv~~f~kl~p~sp~~~~r--~r~gdLL~RLvaDVd~Ld~lyLRvi~P~~~a~ 143 (573)
T COG4987 66 GLAILRTAARYVERLVSHDATFRVLSALRVRLFEKLEPLSPALLLR--YRSGDLLNRLVADVDALDNLYLRVIAPAVVAL 143 (573)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhccCChHHHHh--cChHhHHHHHHhhHHHHhhHHHHHHhhHHHHH
Confidence 4677888889999999999999999999999999999888777664 78999999999999999999988888888888
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHH-HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHH
Q 000789 846 ATIAAGLIIAFTANWILAFVILA-VSPLMLVQGYTQTKFMKGFSADAKLMYEEASQVANDAVGSIRTVASFCSEEKVMDL 924 (1283)
Q Consensus 846 ~~~~~~~~~~~~~~~~l~lv~l~-~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~ 924 (1283)
+...+..+...+++|.+++.+.. ...+.++..+...++-+...+..+...+...+++.|.+.|....+.||.++.+.+.
T Consensus 144 ~~~~~~~i~L~f~~~~~Alll~~~ll~~lli~P~~~~~~~~~~~~~l~~~r~~lr~~~td~v~G~~EL~~~g~~~~~~~~ 223 (573)
T COG4987 144 VLIAVVTIGLSFFSIPLALLLGLILLLLLLIIPTLFYRAGRKFGAHLAQGRAALRSQFTDWVQGQAELLIFGAEDAYRTA 223 (573)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhhHHHHHHcccHHHHHHH
Confidence 77777777776778877765544 44555666677777778888888888889999999999999999999999999999
Q ss_pred HHHHHhcHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHH-HHHHHH
Q 000789 925 YEKKCEGPLKNGVRRGILSGAGFGFSFLVLYCTNAFCFYIGSVLVEHGKATFGQVFKVFFALTISALGVSQTS-AMAPDT 1003 (1283)
Q Consensus 925 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 1003 (1283)
+.+..+.+.+...+...+.++...+..++..+..+..+.+....+..|..+......+++.+.....++.-+. ....+.
T Consensus 224 l~~~e~~~~~~q~k~~~~~~~~~a~~~l~~g~~v~~~l~w~a~~~~~G~~~~~~aa~~ll~~f~~~eaf~~L~~~A~~~l 303 (573)
T COG4987 224 LEATEASWLKAQRKQARFTGLSDAILLLIAGLLVIGLLLWMAAQVGAGALAQPGAALALLVIFAALEAFEPLAPGAFQHL 303 (573)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCcchhHHHHHHHHHHHHHHHHhhhcchhHHHh
Confidence 9999998888888888887777777766666666534444444455666664444444444334444444444 555778
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCCcCCccCCCcccEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHH
Q 000789 1004 TKAKDSAASIFEILDSKPKIDSSKDEGMTLSSVGGAIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKST 1083 (1283)
Q Consensus 1004 ~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKST 1083 (1283)
.+...++.|+.++.+.+|+...+. +.. +.....++++||||+||++ .+++|+|+||++++||||||+|||||||||
T Consensus 304 gq~~~Sa~Rl~~i~~q~~e~~~~~-~~~--~~~~~~l~~~~vsF~y~~~-~~~~L~~~~l~l~~GEkvAIlG~SGsGKST 379 (573)
T COG4987 304 GQVIASARRLNDILDQKPEVTFPD-EQT--ATTGQALELRNVSFTYPGQ-QTKALKNFNLTLAQGEKVAILGRSGSGKST 379 (573)
T ss_pred hHHHHHHHHHhhhccCCcccCCCc-ccc--CCccceeeeccceeecCCC-ccchhhccceeecCCCeEEEECCCCCCHHH
Confidence 888999999999999888765441 111 1112279999999999975 568999999999999999999999999999
Q ss_pred HHHHHhccCCCCcceEEECCccCCCCChHHHhcceEEEccCCCCChhhHHHHHhcCCCCCCCHHHHHHHHHHhChHHHHH
Q 000789 1084 VIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMGLVSQEPVLFNETIRTNIAYGKQGGATEEEIIAATEASNAHNFIS 1163 (1283)
Q Consensus 1084 L~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~I~ 1163 (1283)
++++|.|.|+|++|+|..+|++++.++.+.+|+.|++++|.++||++|+|+||.+++ +++||||+|+++++++++++++
T Consensus 380 llqLl~~~~~~~~G~i~~~g~~~~~l~~~~~~e~i~vl~Qr~hlF~~Tlr~NL~lA~-~~AsDEel~~aL~qvgL~~l~~ 458 (573)
T COG4987 380 LLQLLAGAWDPQQGSITLNGVEIASLDEQALRETISVLTQRVHLFSGTLRDNLRLAN-PDASDEELWAALQQVGLEKLLE 458 (573)
T ss_pred HHHHHHhccCCCCCeeeECCcChhhCChhhHHHHHhhhccchHHHHHHHHHHHhhcC-CCCCHHHHHHHHHHcCHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999984 5799999999999999999999
Q ss_pred hCCCCcccccCCCCCCCChhHHHHHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcCCceEEEEecCchHHhh
Q 000789 1164 ALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKN 1243 (1283)
Q Consensus 1164 ~lp~Gldt~vge~G~~LSgGQrQRlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~ 1243 (1283)
+.|+||+|++||+|.+||||||||+||||+||+|.+++||||||.+||++||+.|.+.|.+..++||+|+||||+..++.
T Consensus 459 ~~p~gl~t~lge~G~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~~~kTll~vTHrL~~le~ 538 (573)
T COG4987 459 SAPDGLNTWLGEGGRRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHAEGKTLLMVTHRLRGLER 538 (573)
T ss_pred hChhhhhchhccCCCcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHhcCCeEEEEecccccHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCEEEEEeCCEEEEecChHHHHhccCchhHHHHHH
Q 000789 1244 ADIIAVVKNGVIAEQGSHDALMKITDGAYASLVAL 1278 (1283)
Q Consensus 1244 ~D~I~vl~~G~Ive~Gt~~eLl~~~~g~y~~L~~~ 1278 (1283)
||||+||++|+++|+|+|.+|+++ +|.|++|.+.
T Consensus 539 ~drIivl~~Gkiie~G~~~~Ll~~-~g~~~~l~q~ 572 (573)
T COG4987 539 MDRIIVLDNGKIIEEGTHAELLAN-NGRYKRLYQL 572 (573)
T ss_pred cCEEEEEECCeeeecCCHHhhhcc-ccHHHHHhcc
Confidence 999999999999999999999995 9999999763
No 50
>TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.
Probab=100.00 E-value=1.1e-78 Score=763.10 Aligned_cols=571 Identities=35% Similarity=0.535 Sum_probs=495.4
Q ss_pred hHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 37 PFYKLFAFADKQDAVLMIVGTISAIGSGLAHPFMTLIFGHLINSFGSSDRSHVVHEVSKVAVKFLYLAAGTGIAAFLQVS 116 (1283)
Q Consensus 37 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (1283)
.++.++++.++++ ..+.+.+++.++.+++....|++++.++|.+...... ......+.+++++.++..++.+++.+
T Consensus 5 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (576)
T TIGR02204 5 PLAALWPFVRPYR-GRVLAALVALLITAAATLSLPYAVRLMIDHGFSKDSS---GLLNRYFAFLLVVALVLALGTAARFY 80 (576)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcccccH---HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556666666553 3445666777788888888899999999974322111 11222223333334445566777888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCccHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Q 000789 117 CWMVTGERQATRIRGLYLKTILRQDIGFFDTETTTGEVIGRMSGDTILIQEAMGEKVGKFIQLMSTFFGGFVVALARGWF 196 (1283)
Q Consensus 117 ~~~~~~~~~~~~lR~~~~~~ll~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 196 (1283)
+....++++..++|..++++++++|..+|++. +.|++++|+++|++.+++++...+..++..++.+++.++++++++|.
T Consensus 81 ~~~~~~~~~~~~lr~~l~~~l~~~~~~~~~~~-~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (576)
T TIGR02204 81 LVTWLGERVVADIRRAVFAHLISLSPSFFDKN-RSGEVVSRLTTDTTLLQSVIGSSLSMALRNALMCIGGLIMMFITSPK 159 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCHHHHccC-CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 88889999999999999999999999999876 89999999999999999999888888888888888899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 197 LALVLLACLPAIVIAGGSMALIMSKMSSRGQIAYSEAGTVVEQTVSGIRTVSSFTGEKQAIEKYNNKLQVAYRAAVQQGM 276 (1283)
Q Consensus 197 l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 276 (1283)
+++++++.+|+++++..++.++.++..++.++..++..+.+.|.++|+++||.|+.|+.+.++|++..++..+...+...
T Consensus 160 l~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (576)
T TIGR02204 160 LTSLVLLAVPLVLLPILLFGRRVRKLSRESQDRIADAGSYAGETLGAIRTVQAFGHEDAERSRFGGAVEKAYEAARQRIR 239 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999988898888888899999999999999999999999999999999999999999999999999988887777776
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC
Q 000789 277 VSGIGLGVLMLTVIGTYGLAVWYGSKLIIEKGYNGGTVINVIMAIMTGGMSLGQTSPCLNAFAGGQAAAYKMFETIKRKP 356 (1283)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~t~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~ 356 (1283)
.......+..++..+..++++++|++++..|.+|+|.++++..+......|+..+...+..+..+..+.+|+.++++.++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~ri~~~l~~~~ 319 (576)
T TIGR02204 240 TRALLTAIVIVLVFGAIVGVLWVGAHDVIAGKMSAGTLGQFVFYAVMVAGSIGTLSEVWGELQRAAGAAERLIELLQAEP 319 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 66666655555555666777888999999999999999999998888899999999999999999999999999998655
Q ss_pred CCCCCCCCCCcccCccccEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEE
Q 000789 357 KIDPYDTSGITLEKIEGEIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLI 436 (1283)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~ 436 (1283)
+.+..........+..+.|+++||+|+|++++++++|+|+||+++|||+++|+||||||||||+++|+|+|+|++|+|++
T Consensus 320 ~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~iL~~inl~i~~Ge~i~IvG~sGsGKSTLlklL~gl~~p~~G~I~i 399 (576)
T TIGR02204 320 DIKAPAHPKTLPVPLRGEIEFEQVNFAYPARPDQPALDGLNLTVRPGETVALVGPSGAGKSTLFQLLLRFYDPQSGRILL 399 (576)
T ss_pred cCCCCCCCccCCcCCCceEEEEEEEEECCCCCCCccccceeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEE
Confidence 42211101111112245799999999998543357999999999999999999999999999999999999999999999
Q ss_pred CCcccCCCCHHHHhcccEEEccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCCh
Q 000789 437 DGIDIKKLQLKWIREKIGLVSQEPILFATSLRENIAYGKENATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSG 516 (1283)
Q Consensus 437 ~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSg 516 (1283)
||.|+++++.+++|++|+||||+|++|++||+|||.++.|+.++++++++++.++++++++++|+|+||.+||+|.+|||
T Consensus 400 ~g~~i~~~~~~~~~~~i~~~~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~~~~l~~~~l~~~i~~l~~gl~t~i~~~g~~LSg 479 (576)
T TIGR02204 400 DGVDLRQLDPAELRARMALVPQDPVLFAASVMENIRYGRPDATDEEVEAAARAAHAHEFISALPEGYDTYLGERGVTLSG 479 (576)
T ss_pred CCEEHHhcCHHHHHHhceEEccCCccccccHHHHHhcCCCCCCHHHHHHHHHHcCcHHHHHhCCCCCCceeCCCCCcCCH
Confidence 99999999999999999999999999999999999999988889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhccCEEEEEeCCEEeEecChh
Q 000789 517 GQKQRIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMTSRTTVVVAHRLTTIRNADLIAVVHQGKIVEKGTHD 596 (1283)
Q Consensus 517 GqkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~~ 596 (1283)
|||||++||||++++|+|||||||||+||+++++.+.+.++++.+++|+|+||||++.++.||+|++|++|++++.|+|+
T Consensus 480 Gq~Qrl~laRal~~~~~ililDEpts~lD~~~~~~i~~~l~~~~~~~t~IiitH~~~~~~~~d~vi~l~~g~~~~~g~~~ 559 (576)
T TIGR02204 480 GQRQRIAIARAILKDAPILLLDEATSALDAESEQLVQQALETLMKGRTTLIIAHRLATVLKADRIVVMDQGRIVAQGTHA 559 (576)
T ss_pred HHHHHHHHHHHHHhCCCeEEEeCcccccCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEeeecHH
Confidence 99999999999999999999999999999999999999999988899999999999999999999999999999999999
Q ss_pred HHhcCCCChhHHHHHHh
Q 000789 597 ELIKDPEGPYTQLVRLQ 613 (1283)
Q Consensus 597 ~l~~~~~~~~~~~~~~~ 613 (1283)
+++++ ++.|++++..|
T Consensus 560 ~l~~~-~~~~~~l~~~~ 575 (576)
T TIGR02204 560 ELIAK-GGLYARLARLQ 575 (576)
T ss_pred HHHHc-CChHHHHHhhc
Confidence 99987 78899888654
No 51
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.4e-78 Score=687.89 Aligned_cols=555 Identities=23% Similarity=0.328 Sum_probs=464.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 49 DAVLMIVGTISAIGSGLAHPFMTLIFGHLINSFGSSDRSHVVHEVSKVAVKFLYLAAGTGIAAFLQVSCWMVTGERQATR 128 (1283)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (1283)
++..++++++.+++..++...+..+.|++|..-.-..... ...+.......=++++...+..|......+....++..+
T Consensus 14 ~~~~l~Lgi~l~~~t~lasigLl~lSGwfisasAiag~~~-~f~~~~p~a~VR~~aI~Rt~~RY~ERlvsH~AtfrvL~~ 92 (573)
T COG4987 14 HKFGLLLGIVLAILTLLASIGLLTLSGWFISASAIAGLAY-IFNVMLPSAGVRGLAILRTAARYVERLVSHDATFRVLSA 92 (573)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhccHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 3456677777777777777777778899887632211110 111111222233456677788888888888899999999
Q ss_pred HHHHHHHHHHhCChhhHhccCCccHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH-HHHH
Q 000789 129 IRGLYLKTILRQDIGFFDTETTTGEVIGRMSGDTILIQEAMGEKVGKFIQLMSTFFGGFVVALARGWFLALVLLA-CLPA 207 (1283)
Q Consensus 129 lR~~~~~~ll~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~l~~l~-~~p~ 207 (1283)
+|.++|+++...+..-..+. ++||+++|+..|++.+++.+-..+...+..+..+.+..+.+.+++|.+++.+.. ++.+
T Consensus 93 lRv~~f~kl~p~sp~~~~r~-r~gdLL~RLvaDVd~Ld~lyLRvi~P~~~a~~~~~~~~i~L~f~~~~~Alll~~~ll~~ 171 (573)
T COG4987 93 LRVRLFEKLEPLSPALLLRY-RSGDLLNRLVADVDALDNLYLRVIAPAVVALVLIAVVTIGLSFFSIPLALLLGLILLLL 171 (573)
T ss_pred HHHHHHHhhccCChHHHHhc-ChHhHHHHHHhhHHHHhhHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 99999999999998888765 899999999999999999999888888888888777777787889998876444 3444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 208 IVIAGGSMALIMSKMSSRGQIAYSEAGTVVEQTVSGIRTVSSFTGEKQAIEKYNNKLQVAYRAAVQQGMVSGIGLGVLML 287 (1283)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (1283)
.+++..++.+..++..++..+..+...+.+.|.+.|....+.||+++.+.+.+.+.-..+.+...+...+..+...+..+
T Consensus 172 lli~P~~~~~~~~~~~~~l~~~r~~lr~~~td~v~G~~EL~~~g~~~~~~~~l~~~e~~~~~~q~k~~~~~~~~~a~~~l 251 (573)
T COG4987 172 LLIIPTLFYRAGRKFGAHLAQGRAALRSQFTDWVQGQAELLIFGAEDAYRTALEATEASWLKAQRKQARFTGLSDAILLL 251 (573)
T ss_pred HHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhhHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55566777777788888888888889999999999999999999999999999999888888888888888888887777
Q ss_pred HHHHHHH-HHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCC
Q 000789 288 TVIGTYG-LAVWYGSKLIIEKGYNGGTVINVIMAIMTGGMSLGQTS-PCLNAFAGGQAAAYKMFETIKRKPKIDPYDTSG 365 (1283)
Q Consensus 288 ~~~~~~~-~~~~~g~~~v~~~~~t~g~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~ 365 (1283)
+..+..+ .++|.++ .+..|..+.-....+++.++....++..+. ..+....+...|+.|+.++++++|+...+..
T Consensus 252 ~~g~~v~~~l~w~a~-~~~~G~~~~~~aa~~ll~~f~~~eaf~~L~~~A~~~lgq~~~Sa~Rl~~i~~q~~e~~~~~~-- 328 (573)
T COG4987 252 IAGLLVIGLLLWMAA-QVGAGALAQPGAALALLVIFAALEAFEPLAPGAFQHLGQVIASARRLNDILDQKPEVTFPDE-- 328 (573)
T ss_pred HHHHHHHHHHHHHHh-cCcCCCcchhHHHHHHHHHHHHHHHHhhhcchhHHHhhHHHHHHHHHhhhccCCcccCCCcc--
Confidence 6666555 4555544 345565553333333333344444444444 3456778889999999999998887654311
Q ss_pred CcccCccccEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCC
Q 000789 366 ITLEKIEGEIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQ 445 (1283)
Q Consensus 366 ~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~ 445 (1283)
..+. ....++++||||+|++. +.++|+|+||++++||++||+|+|||||||++++|.|.|+|++|+|.++|.++..++
T Consensus 329 ~~~~-~~~~l~~~~vsF~y~~~-~~~~L~~~~l~l~~GEkvAIlG~SGsGKSTllqLl~~~~~~~~G~i~~~g~~~~~l~ 406 (573)
T COG4987 329 QTAT-TGQALELRNVSFTYPGQ-QTKALKNFNLTLAQGEKVAILGRSGSGKSTLLQLLAGAWDPQQGSITLNGVEIASLD 406 (573)
T ss_pred ccCC-ccceeeeccceeecCCC-ccchhhccceeecCCCeEEEECCCCCCHHHHHHHHHhccCCCCCeeeECCcChhhCC
Confidence 1111 12279999999999965 457999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcccEEEccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHH
Q 000789 446 LKWIREKIGLVSQEPILFATSLRENIAYGKENATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIA 525 (1283)
Q Consensus 446 ~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiA 525 (1283)
.+.+|+.|++++|.+++|++|+|||+.+++|+++||+++++++++++++++++.|+||+|.+||.|..||||||||+|||
T Consensus 407 ~~~~~e~i~vl~Qr~hlF~~Tlr~NL~lA~~~AsDEel~~aL~qvgL~~l~~~~p~gl~t~lge~G~~LSGGE~rRLAlA 486 (573)
T COG4987 407 EQALRETISVLTQRVHLFSGTLRDNLRLANPDASDEELWAALQQVGLEKLLESAPDGLNTWLGEGGRRLSGGERRRLALA 486 (573)
T ss_pred hhhHHHHHhhhccchHHHHHHHHHHHhhcCCCCCHHHHHHHHHHcCHHHHHHhChhhhhchhccCCCcCCchHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhccCEEEEEeCCEEeEecChhHHhcCCCCh
Q 000789 526 RAILKNPKILLLDEATSALDAESERIVQDALVKIMTSRTTVVVAHRLTTIRNADLIAVVHQGKIVEKGTHDELIKDPEGP 605 (1283)
Q Consensus 526 Ral~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~~~l~~~~~~~ 605 (1283)
|+|++|+|++||||||.+||+.||+++.+.|.+..++||+|+||||+..++.||+|+||++|+|+|+|+|++|+.+ +|.
T Consensus 487 R~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~~~kTll~vTHrL~~le~~drIivl~~Gkiie~G~~~~Ll~~-~g~ 565 (573)
T COG4987 487 RALLHDAPLWLLDEPTEGLDPITERQVLALLFEHAEGKTLLMVTHRLRGLERMDRIIVLDNGKIIEEGTHAELLAN-NGR 565 (573)
T ss_pred HHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHhcCCeEEEEecccccHhhcCEEEEEECCeeeecCCHHhhhcc-ccH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999997 899
Q ss_pred hHHHHH
Q 000789 606 YTQLVR 611 (1283)
Q Consensus 606 ~~~~~~ 611 (1283)
|+++++
T Consensus 566 ~~~l~q 571 (573)
T COG4987 566 YKRLYQ 571 (573)
T ss_pred HHHHhc
Confidence 998875
No 52
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=100.00 E-value=5e-78 Score=756.32 Aligned_cols=564 Identities=29% Similarity=0.403 Sum_probs=478.9
Q ss_pred HHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 704 MRRLAYLNKPEFPVLLIGSIAAGIHGVIFPIFGLLLSSSIRMFFEPEDKLRKDSRFWALIYLVLGIINLIAVPFQNYFFG 783 (1283)
Q Consensus 704 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~ 783 (1283)
++++..+.++.++.+.+.++++++..++....++++..+++..... .....+.++++++.++..+..++..++..
T Consensus 7 ~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~iid~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (588)
T PRK13657 7 YARVLQYLGAEKRLGILLAVANVLLAAATFAEPILFGRIIDAISGK-----GDIFPLLAAWAGFGLFNIIAGVLVARHAD 81 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-----ccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445555555566666666666665566666666666666554321 11111223333334444444444455555
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCccccccCCCChhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Q 000789 784 VAGGKLIRRIRSLTFEKVVHQEISWFDDPANSSGSVGARLSTDASTIRSLVGDSLALVVQNIATIAAGLIIAFTANWILA 863 (1283)
Q Consensus 784 ~~~~~~~~~lr~~~~~~ll~~~~~ff~~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~ 863 (1283)
+...++..+++.++|+++++.|+.+|++ .++|++++|+++|++.+...+...+..++..++.+++.+++++..+|+++
T Consensus 82 ~~~~~~~~~l~~~l~~~l~~~~~~~~~~--~~~g~~~~~~~~di~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 159 (588)
T PRK13657 82 RLAHRRRLAVLTEYFERIIQLPLAWHSQ--RGSGRALHTLLRGTDALFGLWLEFMREHLATLVALVVLLPLALFMNWRLS 159 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCHHHHCc--CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5666666677789999999999999985 78999999999999999988888888888888888888888899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHhcHHHhHHHHHHHH
Q 000789 864 FVILAVSPLMLVQGYTQTKFMKGFSADAKLMYEEASQVANDAVGSIRTVASFCSEEKVMDLYEKKCEGPLKNGVRRGILS 943 (1283)
Q Consensus 864 lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 943 (1283)
++++++.|+++++.....+..++..++..+...+..+.+.|.+.|+++||+|+.++.+.++|.+..++..+...+.....
T Consensus 160 l~~l~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (588)
T PRK13657 160 LVLVVLGIVYTLITTLVMRKTKDGQAAVEEHYHDLFAHVSDAIGNVSVVQSYNRIEAETQALRDIADNLLAAQMPVLSWW 239 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998888888877777777777777777888888999999999999999999999999999999999988888777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCC
Q 000789 944 GAGFGFSFLVLYCTNAFCFYIGSVLVEHGKATFGQVFKVFFALTISALGVSQTSAMAPDTTKAKDSAASIFEILDSKPKI 1023 (1283)
Q Consensus 944 ~~~~~~~~~~~~~~~~~~~~~g~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~ 1023 (1283)
.....+..++..+...+++++|.+++.+|.+++|.++++..++.....|+..+...+..+..+..+.+|+.++++.+++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~a~~~l~~~~~~~l~~l~~~~~~~~~~~~~~~~i~~l~~~~~~~ 319 (588)
T PRK13657 240 ALASVLNRAASTITMLAILVLGAALVQKGQLRVGEVVAFVGFATLLIGRLDQVVAFINQVFMAAPKLEEFFEVEDAVPDV 319 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccc
Confidence 77777777777788888999999999999999999999999999999999999999999999999999999998765442
Q ss_pred CCCCCcCCccCCCcccEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECC
Q 000789 1024 DSSKDEGMTLSSVGGAIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDN 1103 (1283)
Q Consensus 1024 ~~~~~~~~~~~~~~g~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG 1103 (1283)
+... ...+.+...+.|+++||+|+||++ +++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|.+||
T Consensus 320 ~~~~-~~~~~~~~~~~I~~~~vsf~y~~~--~~iL~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~p~~G~I~i~g 396 (588)
T PRK13657 320 RDPP-GAIDLGRVKGAVEFDDVSFSYDNS--RQGVEDVSFEAKPGQTVAIVGPTGAGKSTLINLLQRVFDPQSGRILIDG 396 (588)
T ss_pred CCCC-CCCCcCCCCCeEEEEEEEEEeCCC--CceecceeEEECCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECC
Confidence 2111 111112234579999999999843 4699999999999999999999999999999999999999999999999
Q ss_pred ccCCCCChHHHhcceEEEccCCCCChhhHHHHHhcCCCCCCCHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChh
Q 000789 1104 IELPKFKLSWLRQQMGLVSQEPVLFNETIRTNIAYGKQGGATEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGG 1183 (1283)
Q Consensus 1104 ~di~~~~~~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgG 1183 (1283)
+|+++++.+++|++|+||||||.+|++||||||.++. ++.+|++++++++.+++++++.++|+|+||.+|++|.+||||
T Consensus 397 ~~i~~~~~~~~r~~i~~v~Q~~~lf~~Ti~~Ni~~~~-~~~~d~~i~~al~~~~l~~~i~~lp~gldt~i~~~g~~LSgG 475 (588)
T PRK13657 397 TDIRTVTRASLRRNIAVVFQDAGLFNRSIEDNIRVGR-PDATDEEMRAAAERAQAHDFIERKPDGYDTVVGERGRQLSGG 475 (588)
T ss_pred EEhhhCCHHHHHhheEEEecCcccccccHHHHHhcCC-CCCCHHHHHHHHHHhCHHHHHHhCcccccchhcCCCCCCCHH
Confidence 9999999999999999999999999999999999984 468999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcCCceEEEEecCchHHhhcCEEEEEeCCEEEEecChHH
Q 000789 1184 QKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDA 1263 (1283)
Q Consensus 1184 QrQRlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~~D~I~vl~~G~Ive~Gt~~e 1263 (1283)
||||||||||++++|+|||||||||+||+++|+.|.+.|++..+++|+|+||||+++++.||+|++|++|+++|.|+|++
T Consensus 476 q~QRialARall~~~~iliLDEpts~LD~~t~~~i~~~l~~~~~~~tvIiitHr~~~~~~~D~ii~l~~G~i~~~g~~~~ 555 (588)
T PRK13657 476 ERQRLAIARALLKDPPILILDEATSALDVETEAKVKAALDELMKGRTTFIIAHRLSTVRNADRILVFDNGRVVESGSFDE 555 (588)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhcCCEEEEEEecHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999999888999999999999999999999999999999999999
Q ss_pred HHhccCchhHHHHHHh
Q 000789 1264 LMKITDGAYASLVALH 1279 (1283)
Q Consensus 1264 Ll~~~~g~y~~L~~~~ 1279 (1283)
|+++ ++.|++|+..+
T Consensus 556 l~~~-~~~y~~l~~~~ 570 (588)
T PRK13657 556 LVAR-GGRFAALLRAQ 570 (588)
T ss_pred HHHC-CChHHHHHHHh
Confidence 9986 89999999865
No 53
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit. The gene pair cydCD encodes an ABC-family transporter in which each gene contains an N-terminal membrane-spanning domain (pfam00664) and a C-terminal ATP-binding domain (pfam00005). In E. coli these genes were discovered as mutants which caused the terminal heme-copper oxidase complex cytochrome bd to fail to assemble. Recent work has shown that the transporter is involved in export of redox-active thiol compounds such as cysteine and glutathione. The linkage to assembly of the cytochrome bd complex is further supported by the conserved operon structure found outside the gammaproteobacteria (cydABCD) containing both the transporter and oxidase genes components. The genes used as the seed members for this model are all either found in the gammproteobacterial context or the CydABCD context. All members of this family scoring above trusted at the time of its creation were from genomes which encode a cytochrome bd complex.
Probab=100.00 E-value=2.8e-78 Score=750.36 Aligned_cols=521 Identities=23% Similarity=0.284 Sum_probs=442.3
Q ss_pred HHhhcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhhhhHHH--HHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 708 AYLNKPEFPVLLIGSIAAGIHGVIFPIFGLLLSSSIRMFFEPEDKLRKDSRFW--ALIYLVLGIINLIAVPFQNYFFGVA 785 (1283)
Q Consensus 708 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~l~~~~~~~~~~~~ 785 (1283)
+.+.++.++.+++..++..+..++....++++...++....... ...++ ...++++.++..++.++..++....
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (529)
T TIGR02868 5 LPLLQPRTRRLVVAILLGALALGSAVALLGVSAWLISRAAEMPP----VLYLSVAAVAVRAFGIGRAVFRYLERLVGHDA 80 (529)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcch----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444555555555555555555555555666666554332110 11111 1112234455677778888889999
Q ss_pred HHHHHHHHHHHHHHHHHcCCccccccCCCChhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Q 000789 786 GGKLIRRIRSLTFEKVVHQEISWFDDPANSSGSVGARLSTDASTIRSLVGDSLALVVQNIATIAAGLIIAFTANWILAFV 865 (1283)
Q Consensus 786 ~~~~~~~lr~~~~~~ll~~~~~ff~~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv 865 (1283)
+.++..++|.++|+++++.|.+||++ +++|++++|+++|++.+++.+...+..++..++.+++++++++..+|.++++
T Consensus 81 ~~~~~~~lr~~~~~~ll~~~~~~~~~--~~~g~~~~~l~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~ 158 (529)
T TIGR02868 81 ALRSLGRLRVRVYDRLARLALAGRRR--FQTGDLLGRLGADVDALQDLYVRVIVPLVVALVVGSAAVAAIALLSVPAALV 158 (529)
T ss_pred HHHHHHHHHHHHHHHhhccCcccccc--CChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 99999999999999999999999985 7899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHH-HHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHhcHHHhHHHHHHHHH
Q 000789 866 ILAVSPLMLVQG-YTQTKFMKGFSADAKLMYEEASQVANDAVGSIRTVASFCSEEKVMDLYEKKCEGPLKNGVRRGILSG 944 (1283)
Q Consensus 866 ~l~~~pl~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 944 (1283)
+++.+|++.+.. ++..+..+...++.++..++..+.+.|.++|+++||+|+.++.+.++|.+..++..+...+.....+
T Consensus 159 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (529)
T TIGR02868 159 LAAGLLLAGFVAPLVSLRAARAAEVALARLRSQLYQQLTDALDGAADLVAYGALDPALAQVEAADRELLAAERRAARATG 238 (529)
T ss_pred HHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHhccHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888877765554 4444444555566677778889999999999999999999999999999999999988888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCC
Q 000789 945 AGFGFSFLVLYCTNAFCFYIGSVLVEHGKATFGQVFKVFFALTISALGVSQTSAMAPDTTKAKDSAASIFEILDSKPKID 1024 (1283)
Q Consensus 945 ~~~~~~~~~~~~~~~~~~~~g~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~ 1024 (1283)
....+..++..+..++++++|.+++..|.++.|.+.++..+......++..+......+..+..+.+|+.++++.+++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~t~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~ 318 (529)
T TIGR02868 239 LGAAAQLLAAGLAVLGALWAGGPAVADGTLAPATLAVLVLLPLAAFEAFAPLPAAAQALTRVRAAAERIEEVTGAKGPRP 318 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcC
Confidence 77777788888888888899999999999999999999999888999999999999999999999999999998765432
Q ss_pred CCCCc-CCccCCCcccEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECC
Q 000789 1025 SSKDE-GMTLSSVGGAIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDN 1103 (1283)
Q Consensus 1025 ~~~~~-~~~~~~~~g~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG 1103 (1283)
..... ....++..+.|+|+||+|+|+++ +++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|++||
T Consensus 319 ~~~~~~~~~~~~~~~~I~~~~vsf~Y~~~--~~vL~~isl~i~~G~~vaIvG~SGsGKSTLl~lL~g~~~p~~G~I~i~g 396 (529)
T TIGR02868 319 EGVVPAAGALGLGKPTLELRDLSFGYPGS--PPVLDGVSLDLPPGERVAILGPSGSGKSTLLMLLTGLLDPLQGEVTLDG 396 (529)
T ss_pred CCCCCCCcccCCCCceEEEEEEEEecCCC--CceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECC
Confidence 21111 11111234579999999999853 3599999999999999999999999999999999999999999999999
Q ss_pred ccCCCCChHHHhcceEEEccCCCCChhhHHHHHhcCCCCCCCHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChh
Q 000789 1104 IELPKFKLSWLRQQMGLVSQEPVLFNETIRTNIAYGKQGGATEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGG 1183 (1283)
Q Consensus 1104 ~di~~~~~~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgG 1183 (1283)
+|++++ .+++|++|+||||||+||++||||||++|. ++++||++++|++.++++|+|.+||+||||.|||+|.+||||
T Consensus 397 ~~i~~~-~~~lr~~i~~V~Q~~~lF~~TI~eNI~~g~-~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSGG 474 (529)
T TIGR02868 397 VSVSSL-QDELRRRISVFAQDAHLFDTTVRDNLRLGR-PDATDEELWAALERVGLADWLRSLPDGLDTVLGEGGARLSGG 474 (529)
T ss_pred EEhhhH-HHHHHhheEEEccCcccccccHHHHHhccC-CCCCHHHHHHHHHHcCCHHHHHhCcccccchhccccCcCCHH
Confidence 999999 999999999999999999999999999984 478999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcCCceEEEEecCc
Q 000789 1184 QKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRL 1238 (1283)
Q Consensus 1184 QrQRlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl 1238 (1283)
||||||||||++++|+|||||||||+||++||+.|++.|++..+++|+|+||||+
T Consensus 475 QrQRiaiARall~~~~iliLDE~TSaLD~~te~~I~~~l~~~~~~~TvIiItHrl 529 (529)
T TIGR02868 475 ERQRLALARALLADAPILLLDEPTEHLDAGTESELLEDLLAALSGKTVVVITHHL 529 (529)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEecCC
Confidence 9999999999999999999999999999999999999999988999999999996
No 54
>TIGR01192 chvA glucan exporter ATP-binding protein. This model describes glucan exporter ATP binding protein in bacteria. It belongs to the larger ABC transporter superfamily with the characteristic ATP binding motif. The In general, this protein is in some ways implicated in osmoregulation and suggested to participate in the export of glucan from the cytoplasm to periplasm. The cyclic beta-1,2-glucan in the bactrerial periplasmic space is suggested to confer the property of high osmolority. It has also been demonstrated that mutants in this loci have lost functions of virulence and motility. It is unclear as to how virulence and osmoadaptaion are related.
Probab=100.00 E-value=1.7e-77 Score=747.14 Aligned_cols=565 Identities=28% Similarity=0.389 Sum_probs=483.7
Q ss_pred HHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 704 MRRLAYLNKPEFPVLLIGSIAAGIHGVIFPIFGLLLSSSIRMFFEPEDKLRKDSRFWALIYLVLGIINLIAVPFQNYFFG 783 (1283)
Q Consensus 704 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~ 783 (1283)
+++++++.++.++.+++.++++++..++....+++++.+++..+.... ...+.++++++.++..+..++..++..
T Consensus 7 ~~~l~~~l~~~k~~~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (585)
T TIGR01192 7 YVRALSYLNVHKNRVLLIVIANITLAAITIAEPILFGRIIDAISSKSD-----VLPTLALWAGFGVFNTIAYVLVAREAD 81 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc-----HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345555666777777777777777777777778888877765543211 111222222333444444455555555
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCccccccCCCChhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Q 000789 784 VAGGKLIRRIRSLTFEKVVHQEISWFDDPANSSGSVGARLSTDASTIRSLVGDSLALVVQNIATIAAGLIIAFTANWILA 863 (1283)
Q Consensus 784 ~~~~~~~~~lr~~~~~~ll~~~~~ff~~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~ 863 (1283)
....++..++|.++|++++++|++||++ +++|++++|+++|++.+...+...+..++..++.+++.+++++.++|.++
T Consensus 82 ~~~~~~~~~lr~~~~~~l~~l~~~~~~~--~~~g~~~s~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 159 (585)
T TIGR01192 82 RLAHGRRATLLTEAFGRIISMPLSWHQQ--RGTSNALHTLLRATETLFGLWLEFMRQHLATFVALFLLIPTAFAMDWRLS 159 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHhCC--CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6666667777789999999999999985 78999999999999999999888888888888888888888999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHhcHHHhHHHHHHHH
Q 000789 864 FVILAVSPLMLVQGYTQTKFMKGFSADAKLMYEEASQVANDAVGSIRTVASFCSEEKVMDLYEKKCEGPLKNGVRRGILS 943 (1283)
Q Consensus 864 lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 943 (1283)
+++++++|++++......+..++..++..+...+..+.+.|.++|+++||+|+.++.+.++|.+..++..+...+.....
T Consensus 160 li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (585)
T TIGR01192 160 IVLMVLGILYILIAKLVMQRTKNGQAAVEHHYHNVFKHVSDSISNVSVVHSYNRIEAETSALKQFTNNLLSAQYPVLDWW 239 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999988888777777777677777778888999999999999999999999999999999998888777776666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCC
Q 000789 944 GAGFGFSFLVLYCTNAFCFYIGSVLVEHGKATFGQVFKVFFALTISALGVSQTSAMAPDTTKAKDSAASIFEILDSKPKI 1023 (1283)
Q Consensus 944 ~~~~~~~~~~~~~~~~~~~~~g~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~ 1023 (1283)
+....+...+..+..++++++|.+++.+|.+++|.++++..+......|+..+......+..+..+.+|+.++.+.+++.
T Consensus 240 ~~~~~~~~~~~~~~~~~v~~~g~~~v~~g~it~g~l~a~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~ 319 (585)
T TIGR01192 240 ALASGLNRMASTISMMCILVIGTVLVIKGELSVGEVIAFIGFANLLIGRLDQMSGFITQIFEARAKLEDFFDLEDSVFQR 319 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccc
Confidence 66666666777777788889999999999999999999999999999999999999999999999999999998765443
Q ss_pred CCCCCcCCccCCCcccEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECC
Q 000789 1024 DSSKDEGMTLSSVGGAIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDN 1103 (1283)
Q Consensus 1024 ~~~~~~~~~~~~~~g~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG 1103 (1283)
..... ....+...+.|+++||+|+|+++ .++|+|+||+|++||++|||||||||||||+++|+|+|+|++|+|++||
T Consensus 320 ~~~~~-~~~~~~~~~~i~~~~v~~~y~~~--~~~l~~i~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g 396 (585)
T TIGR01192 320 EEPAD-APELPNVKGAVEFRHITFEFANS--SQGVFDVSFEAKAGQTVAIVGPTGAGKTTLINLLQRVYDPTVGQILIDG 396 (585)
T ss_pred cCCcc-CCCCCCCCCeEEEEEEEEECCCC--CccccceeEEEcCCCEEEEECCCCCCHHHHHHHHccCCCCCCCEEEECC
Confidence 21111 11112234579999999999843 3589999999999999999999999999999999999999999999999
Q ss_pred ccCCCCChHHHhcceEEEccCCCCChhhHHHHHhcCCCCCCCHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChh
Q 000789 1104 IELPKFKLSWLRQQMGLVSQEPVLFNETIRTNIAYGKQGGATEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGG 1183 (1283)
Q Consensus 1104 ~di~~~~~~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgG 1183 (1283)
+|+++++.+++|++++||||||.+|++|++|||.++. +++++++++++++.+++++++.++|+|+||.+|++|.+||||
T Consensus 397 ~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~-~~~~~~~~~~a~~~~~~~~~i~~l~~g~~t~~~~~~~~LSgG 475 (585)
T TIGR01192 397 IDINTVTRESLRKSIATVFQDAGLFNRSIRENIRLGR-EGATDEEVYEAAKAAAAHDFILKRSNGYDTLVGERGNRLSGG 475 (585)
T ss_pred EEhhhCCHHHHHhheEEEccCCccCcccHHHHHhcCC-CCCCHHHHHHHHHHhCcHHHHHhccccccchhcCCCCCCCHH
Confidence 9999999999999999999999999999999999984 468999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcCCceEEEEecCchHHhhcCEEEEEeCCEEEEecChHH
Q 000789 1184 QKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDA 1263 (1283)
Q Consensus 1184 QrQRlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~~D~I~vl~~G~Ive~Gt~~e 1263 (1283)
|||||+|||||+++|+|||||||||+||+++++.+++.|++..+++|+|+||||++++..||+|++|++|+++|.|+|+|
T Consensus 476 q~qrl~lARall~~p~ililDEpts~LD~~~~~~i~~~l~~~~~~~tvI~isH~~~~~~~~d~i~~l~~G~i~~~g~~~~ 555 (585)
T TIGR01192 476 ERQRLAIARAILKNAPILVLDEATSALDVETEARVKNAIDALRKNRTTFIIAHRLSTVRNADLVLFLDQGRLIEKGSFQE 555 (585)
T ss_pred HHHHHHHHHHHhcCCCEEEEECCccCCCHHHHHHHHHHHHHHhCCCEEEEEEcChHHHHcCCEEEEEECCEEEEECCHHH
Confidence 99999999999999999999999999999999999999999888999999999999999999999999999999999999
Q ss_pred HHhccCchhHHHHHHhh
Q 000789 1264 LMKITDGAYASLVALHV 1280 (1283)
Q Consensus 1264 Ll~~~~g~y~~L~~~~~ 1280 (1283)
|+++ +|.|++|+..+.
T Consensus 556 l~~~-~~~y~~l~~~~~ 571 (585)
T TIGR01192 556 LIQK-DGRFYKLLRRSG 571 (585)
T ss_pred HHHC-CChHHHHHHhCc
Confidence 9996 899999998764
No 55
>TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.
Probab=100.00 E-value=1.3e-77 Score=753.19 Aligned_cols=564 Identities=35% Similarity=0.530 Sum_probs=485.2
Q ss_pred hhcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 710 LNKPEFPVLLIGSIAAGIHGVIFPIFGLLLSSSIRMFFEPEDKLRKDSRFWALIYLVLGIINLIAVPFQNYFFGVAGGKL 789 (1283)
Q Consensus 710 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~ 789 (1283)
+.++.++.+.+.+++.++.+++....++++..+++..+...+ ......+..+++++.++..++.+++.++....+.++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (576)
T TIGR02204 12 FVRPYRGRVLAALVALLITAAATLSLPYAVRLMIDHGFSKDS--SGLLNRYFAFLLVVALVLALGTAARFYLVTWLGERV 89 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhccccc--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444455555555556666666666666666654332111 111222333444455556667778888999999999
Q ss_pred HHHHHHHHHHHHHcCCccccccCCCChhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q 000789 790 IRRIRSLTFEKVVHQEISWFDDPANSSGSVGARLSTDASTIRSLVGDSLALVVQNIATIAAGLIIAFTANWILAFVILAV 869 (1283)
Q Consensus 790 ~~~lr~~~~~~ll~~~~~ff~~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~l~~ 869 (1283)
...+|..+++++++.|.++|++ .++|++++|+++|++.+++++...+..++..++.+++.+++++.++|++++++++.
T Consensus 90 ~~~lr~~l~~~l~~~~~~~~~~--~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~ 167 (576)
T TIGR02204 90 VADIRRAVFAHLISLSPSFFDK--NRSGEVVSRLTTDTTLLQSVIGSSLSMALRNALMCIGGLIMMFITSPKLTSLVLLA 167 (576)
T ss_pred HHHHHHHHHHHHHcCCHHHHcc--CCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 9999999999999999999985 77999999999999999999999898989999999999999999999999999988
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHhcHHHhHHHHHHHHHHHHHH
Q 000789 870 SPLMLVQGYTQTKFMKGFSADAKLMYEEASQVANDAVGSIRTVASFCSEEKVMDLYEKKCEGPLKNGVRRGILSGAGFGF 949 (1283)
Q Consensus 870 ~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 949 (1283)
.|++++..++..+..++..++..+...+..+.+.|.++|+++||+++.++.+.++|.+..++..+...+..........+
T Consensus 168 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (576)
T TIGR02204 168 VPLVLLPILLFGRRVRKLSRESQDRIADAGSYAGETLGAIRTVQAFGHEDAERSRFGGAVEKAYEAARQRIRTRALLTAI 247 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888877777777777788888888889999999999999999999999999999999998888777776666666666
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCc
Q 000789 950 SFLVLYCTNAFCFYIGSVLVEHGKATFGQVFKVFFALTISALGVSQTSAMAPDTTKAKDSAASIFEILDSKPKIDSSKDE 1029 (1283)
Q Consensus 950 ~~~~~~~~~~~~~~~g~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~ 1029 (1283)
...+.++..++++++|.+++..|.+++|.++++..+......|+..+...+.++..+..+.+|+.++++.+++.+.....
T Consensus 248 ~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~~ 327 (576)
T TIGR02204 248 VIVLVFGAIVGVLWVGAHDVIAGKMSAGTLGQFVFYAVMVAGSIGTLSEVWGELQRAAGAAERLIELLQAEPDIKAPAHP 327 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCCC
Confidence 66666667778888999999999999999999999999999999999999999999999999999998865442211111
Q ss_pred CCccCCCcccEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCC
Q 000789 1030 GMTLSSVGGAIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKF 1109 (1283)
Q Consensus 1030 ~~~~~~~~g~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~ 1109 (1283)
.....+..+.|+|+||+|+||++.+.++|+|+||+|+|||+++|+|+||||||||+++|+|+|+|++|+|++||+|++++
T Consensus 328 ~~~~~~~~~~i~~~~v~f~y~~~~~~~iL~~inl~i~~Ge~i~IvG~sGsGKSTLlklL~gl~~p~~G~I~i~g~~i~~~ 407 (576)
T TIGR02204 328 KTLPVPLRGEIEFEQVNFAYPARPDQPALDGLNLTVRPGETVALVGPSGAGKSTLFQLLLRFYDPQSGRILLDGVDLRQL 407 (576)
T ss_pred ccCCcCCCceEEEEEEEEECCCCCCCccccceeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEECCEEHHhc
Confidence 11111224579999999999864335799999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHhcceEEEccCCCCChhhHHHHHhcCCCCCCCHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHH
Q 000789 1110 KLSWLRQQMGLVSQEPVLFNETIRTNIAYGKQGGATEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIA 1189 (1283)
Q Consensus 1110 ~~~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRla 1189 (1283)
+.+++|++|+||||||++|++||||||.++. ++.+|++++++++.+++.++++++|+|+||.+||+|.+|||||||||+
T Consensus 408 ~~~~~~~~i~~~~Q~~~lf~~Ti~~Ni~~~~-~~~~~~~~~~~l~~~~l~~~i~~l~~gl~t~i~~~g~~LSgGq~Qrl~ 486 (576)
T TIGR02204 408 DPAELRARMALVPQDPVLFAASVMENIRYGR-PDATDEEVEAAARAAHAHEFISALPEGYDTYLGERGVTLSGGQRQRIA 486 (576)
T ss_pred CHHHHHHhceEEccCCccccccHHHHHhcCC-CCCCHHHHHHHHHHcCcHHHHHhCCCCCCceeCCCCCcCCHHHHHHHH
Confidence 9999999999999999999999999999984 467899999999999999999999999999999999999999999999
Q ss_pred HHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcCCceEEEEecCchHHhhcCEEEEEeCCEEEEecChHHHHhccC
Q 000789 1190 IARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALMKITD 1269 (1283)
Q Consensus 1190 iARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~~D~I~vl~~G~Ive~Gt~~eLl~~~~ 1269 (1283)
||||++++|+|||||||||+||+++|+.|.+.|++..+++|+|+||||++.+..||+|++|++|+++|.|+|++|+++ +
T Consensus 487 laRal~~~~~ililDEpts~lD~~~~~~i~~~l~~~~~~~t~IiitH~~~~~~~~d~vi~l~~g~~~~~g~~~~l~~~-~ 565 (576)
T TIGR02204 487 IARAILKDAPILLLDEATSALDAESEQLVQQALETLMKGRTTLIIAHRLATVLKADRIVVMDQGRIVAQGTHAELIAK-G 565 (576)
T ss_pred HHHHHHhCCCeEEEeCcccccCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEeeecHHHHHHc-C
Confidence 999999999999999999999999999999999998889999999999999999999999999999999999999995 8
Q ss_pred chhHHHHHHh
Q 000789 1270 GAYASLVALH 1279 (1283)
Q Consensus 1270 g~y~~L~~~~ 1279 (1283)
+.|++|++.|
T Consensus 566 ~~~~~l~~~~ 575 (576)
T TIGR02204 566 GLYARLARLQ 575 (576)
T ss_pred ChHHHHHhhc
Confidence 9999999876
No 56
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=1.5e-77 Score=746.86 Aligned_cols=515 Identities=27% Similarity=0.420 Sum_probs=460.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChhHHHHHHhhhHHHHHHHHHHHH
Q 000789 759 FWALIYLVLGIINLIAVPFQNYFFGVAGGKLIRRIRSLTFEKVVHQEISWFDDPANSSGSVGARLSTDASTIRSLVGDSL 838 (1283)
Q Consensus 759 ~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~ff~~~~~~~G~l~~rl~~D~~~i~~~~~~~l 838 (1283)
.|..+++++.++..++.++..++....+.+...++|..+|+++++.|++||++ +++|++++|+++|++.++..+...+
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~~~~--~~~g~i~srl~~Dv~~i~~~~~~~~ 114 (569)
T PRK10789 37 MWIGTMVLIAVVVYLLRYVWRVLLFGASYQLAVELREDFYRQLSRQHPEFYLR--HRTGDLMARATNDVDRVVFAAGEGV 114 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHcC--CCHHHHHHHHHHhHHHHHHHHHHHH
Confidence 34455555566677777888888889999999999999999999999999985 7899999999999999998887777
Q ss_pred HHHHHHHHHHHHHHHHH-HHHhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhcc
Q 000789 839 ALVVQNIATIAAGLIIA-FTANWILAFVILAVSPLMLVQGYTQTKFMKGFSADAKLMYEEASQVANDAVGSIRTVASFCS 917 (1283)
Q Consensus 839 ~~~~~~~~~~~~~~~~~-~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~ 917 (1283)
..++..++.++++++++ +.++|.+++++++++|++++......+..++..++.++..++..+.+.|.+.|+++||+|+.
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~l~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~ 194 (569)
T PRK10789 115 LTLVDSLVMGCAVLIVMSTQISWQLTLLALLPMPVMAIMIKRYGDQLHERFKLAQAAFSSLNDRTQESLTSIRMIKAFGL 194 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcc
Confidence 77777766666555555 57999999999999999888877777777777777778888899999999999999999999
Q ss_pred HHHHHHHHHHHHhcHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHH
Q 000789 918 EEKVMDLYEKKCEGPLKNGVRRGILSGAGFGFSFLVLYCTNAFCFYIGSVLVEHGKATFGQVFKVFFALTISALGVSQTS 997 (1283)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 997 (1283)
++.+.++|.+..++..+...+.....+....+......+..++++++|.+++..|.+++|.++++..+......|+..+.
T Consensus 195 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~lv~~g~lt~g~l~a~~~~~~~~~~pl~~l~ 274 (569)
T PRK10789 195 EDRQSALFAADAEDTGKKNMRVARIDARFDPTIYIAIGMANLLAIGGGSWMVVNGSLTLGQLTSFVMYLGLMIWPMLALA 274 (569)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998888888877777776666666667777788899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCCCCCCcCCccCCCcccEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCC
Q 000789 998 AMAPDTTKAKDSAASIFEILDSKPKIDSSKDEGMTLSSVGGAIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGES 1077 (1283)
Q Consensus 998 ~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~S 1077 (1283)
..+..+..+..+.+|+.++++.+++.+... .+.+...+.|+++||+|+|+.. +.++|+|+||+|+|||++||||||
T Consensus 275 ~~~~~~~~~~~a~~ri~~ll~~~~~~~~~~---~~~~~~~~~I~~~~v~~~y~~~-~~~~l~~i~~~i~~G~~~~ivG~s 350 (569)
T PRK10789 275 WMFNIVERGSAAYSRIRAMLAEAPVVKDGS---EPVPEGRGELDVNIRQFTYPQT-DHPALENVNFTLKPGQMLGICGPT 350 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCcccCCC---CCCCCCCCcEEEEEEEEECCCC-CCccccCeeEEECCCCEEEEECCC
Confidence 999999999999999999998765432111 1112234679999999999853 357999999999999999999999
Q ss_pred CCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHhcceEEEccCCCCChhhHHHHHhcCCCCCCCHHHHHHHHHHhC
Q 000789 1078 GSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMGLVSQEPVLFNETIRTNIAYGKQGGATEEEIIAATEASN 1157 (1283)
Q Consensus 1078 GSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~ 1157 (1283)
|||||||+++|+|+|+|++|+|.+||+|+++++.+++|++++||||+|.+|++|++|||.++. +++++++++++++.++
T Consensus 351 GsGKSTLl~ll~g~~~p~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~-~~~~~~~~~~~~~~~~ 429 (569)
T PRK10789 351 GSGKSTLLSLIQRHFDVSEGDIRFHDIPLTKLQLDSWRSRLAVVSQTPFLFSDTVANNIALGR-PDATQQEIEHVARLAS 429 (569)
T ss_pred CCCHHHHHHHHhcccCCCCCEEEECCEEHhhCCHHHHHhheEEEccCCeeccccHHHHHhcCC-CCCCHHHHHHHHHHcC
Confidence 999999999999999999999999999999999999999999999999999999999999984 4689999999999999
Q ss_pred hHHHHHhCCCCcccccCCCCCCCChhHHHHHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcCCceEEEEecC
Q 000789 1158 AHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHR 1237 (1283)
Q Consensus 1158 l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHr 1237 (1283)
+++++.++|+|+||.+|++|.+||||||||++||||++++|+|||||||||+||+++++.|++.|++..+++|+|+||||
T Consensus 430 l~~~i~~lp~gl~t~~~~~g~~LSgGq~qRi~lARall~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~tii~itH~ 509 (569)
T PRK10789 430 VHDDILRLPQGYDTEVGERGVMLSGGQKQRISIARALLLNAEILILDDALSAVDGRTEHQILHNLRQWGEGRTVIISAHR 509 (569)
T ss_pred CHHHHHhCcCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEECccccCCHHHHHHHHHHHHHHhCCCEEEEEecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999998889999999999
Q ss_pred chHHhhcCEEEEEeCCEEEEecChHHHHhccCchhHHHHHHhhc
Q 000789 1238 LTTIKNADIIAVVKNGVIAEQGSHDALMKITDGAYASLVALHVS 1281 (1283)
Q Consensus 1238 l~ti~~~D~I~vl~~G~Ive~Gt~~eLl~~~~g~y~~L~~~~~~ 1281 (1283)
++++..||+|++|++|+++|.|+|+||+++ +|.|++|++.|..
T Consensus 510 ~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~-~~~y~~l~~~~~~ 552 (569)
T PRK10789 510 LSALTEASEILVMQHGHIAQRGNHDQLAQQ-SGWYRDMYRYQQL 552 (569)
T ss_pred hhHHHcCCEEEEEeCCEEEEecCHHHHHHc-CChHHHHHHHhhh
Confidence 999999999999999999999999999986 8999999987643
No 57
>TIGR02857 CydD thiol reductant ABC exporter, CydD subunit. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD
Probab=100.00 E-value=1.8e-77 Score=743.21 Aligned_cols=524 Identities=24% Similarity=0.330 Sum_probs=460.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 53 MIVGTISAIGSGLAHPFMTLIFGHLINSFG-SSDRSHVVHEVSKVAVKFLYLAAGTGIAAFLQVSCWMVTGERQATRIRG 131 (1283)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~id~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~ 131 (1283)
+.++++++++.+++.+..|+++++++|.+. .... ...+..+.+.+++++++..++.+++.++..+.+.++..++|.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~ 81 (529)
T TIGR02857 5 LALLGLLGALGALLIIAQAWLLARVIDGLISAGEP---LAELLPALGALALAVLLRALLGWLGERAAARAAAAVKSQLRE 81 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCC---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455667777778888889999999999873 3211 122233344455556667788899999999999999999999
Q ss_pred HHHHHHHhCChhhHhccCCccHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Q 000789 132 LYLKTILRQDIGFFDTETTTGEVIGRMSGDTILIQEAMGEKVGKFIQLMSTFFGGFVVALARGWFLALVLLACLPAIVIA 211 (1283)
Q Consensus 132 ~~~~~ll~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~~ 211 (1283)
++|++++++|..+|++. ++|++++|+++|++.+++.+...+..++..++.+++.++++++++|.+++++++.+|+++++
T Consensus 82 ~l~~~l~~~~~~~~~~~-~~g~~~~~l~~di~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~l~~~~l~~~~ 160 (529)
T TIGR02857 82 RLLAAVAALGPGWLQGR-PSGELATLALEGVEALDGYFARYLPQLVLAVIIPLAILAAVFPADWISGLILLLTAPLIPIF 160 (529)
T ss_pred HHHHHHHhCCchhhccC-ChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 99999999999999876 99999999999999999999888888888888888888999999999999999999988888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 212 GGSMALIMSKMSSRGQIAYSEAGTVVEQTVSGIRTVSSFTGEKQAIEKYNNKLQVAYRAAVQQGMVSGIGLGVLMLTVIG 291 (1283)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (1283)
...+.++.++..++.++..++..+.+.|.++|+++||+|+.|+.+.++|++..++..+...+..+.......+..++..+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (529)
T TIGR02857 161 MILIGWAAQAAARKQWAALSRLSGHFLDRLRGLPTLKLFGRAKAQAAAIARSSEEYRERTMRVLRIAFLSSAVLELFATL 240 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888888889999999999999999999999999999999999999999888888877777776666666665555
Q ss_pred HHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCCcccCc
Q 000789 292 TYGLAVWYGSKLIIEKGYNGGTVINVIMAIMTGGMSLGQTSPCLNAFAGGQAAAYKMFETIKRKPKIDPYDTSGITLEKI 371 (1283)
Q Consensus 292 ~~~~~~~~g~~~v~~~~~t~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~ 371 (1283)
..+++++++++.+..|.+|.|.+++++.+......|+..+...+..++++..+++|+.++++.+++..+.. ..+...
T Consensus 241 ~~~~~~~~~~~~~~~g~~t~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~ll~~~~~~~~~~---~~~~~~ 317 (529)
T TIGR02857 241 SVALVAVYIGFRLLAGDLDLATGLFVLLLAPEFYLPLRQLGADYHARADGVAAAEALFAVLDAPRPLAGKA---PVTAAP 317 (529)
T ss_pred HHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCc---CCCCCC
Confidence 55555556667777999999999999888888889999999999999999999999999998543321111 111112
Q ss_pred cccEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHHhc
Q 000789 372 EGEIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWIRE 451 (1283)
Q Consensus 372 ~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~ 451 (1283)
.+.|+++||+|+|++. ++++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|.+||+|+++++.+++|+
T Consensus 318 ~~~i~~~~v~f~y~~~-~~~il~~i~l~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~I~~~g~~i~~~~~~~lr~ 396 (529)
T TIGR02857 318 APSLEFSGLSVAYPGR-RAPALRPVSFTVPPGERVALVGPSGAGKSTLLNLLLGFVDPTEGSIAVNGVPLADADADSWRD 396 (529)
T ss_pred CCeEEEEEEEEECCCC-CcccccceeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEehhhCCHHHHHh
Confidence 3579999999999854 247999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccEEEccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHhcC
Q 000789 452 KIGLVSQEPILFATSLRENIAYGKENATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARAILKN 531 (1283)
Q Consensus 452 ~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARal~~~ 531 (1283)
+|+||+|+|++|++||+|||.++.++.++++++++++.++++++++++|+|+||.+||+|.+||||||||++||||++++
T Consensus 397 ~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~Gldt~v~e~g~~LSgGq~qri~laRal~~~ 476 (529)
T TIGR02857 397 QIAWVPQHPFLFAGTIAENIRLARPDASDAEIRRALERAGLDEFVAALPQGLDTLIGEGGAGLSGGQAQRLALARAFLRD 476 (529)
T ss_pred heEEEcCCCcccCcCHHHHHhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhccccccCCHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999888899999999999999999999999999999999999999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhccCEEEEE
Q 000789 532 PKILLLDEATSALDAESERIVQDALVKIMTSRTTVVVAHRLTTIRNADLIAVV 584 (1283)
Q Consensus 532 ~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl 584 (1283)
|+|||||||||+||+++++.+.+.+.++.+++|+|+||||+++++.||+|++|
T Consensus 477 ~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~~l 529 (529)
T TIGR02857 477 APLLLLDEPTAHLDAETEALVTEALRALAQGRTVLLVTHRLALAERADRIVVL 529 (529)
T ss_pred CCEEEEeCcccccCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHhCCEEEeC
Confidence 99999999999999999999999999988899999999999999999999986
No 58
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=1.6e-77 Score=810.46 Aligned_cols=541 Identities=21% Similarity=0.283 Sum_probs=453.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcC-CCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000789 61 IGSGLAHPFMTLIFGHLINSFGS-SDRSHVVHEVSKVAVKFLYLAAGTGIAAFLQVSCWMVTGERQATRIRGLYLKTILR 139 (1283)
Q Consensus 61 ~~~~~~~~~~~~~~~~~id~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~~~~~ll~ 139 (1283)
++..++..+.++.++...|.... .+... ...+..++++++++..++.++..++..+.+.+...++|.++++++++
T Consensus 975 ~~~~~~~~~~~~~l~~w~~~~~~~~~~~~----~~~~~~iy~~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~ 1050 (1522)
T TIGR00957 975 VCNHVSALASNYWLSLWTDDPMVNGTQNN----TSLRLSVYGALGILQGFAVFGYSMAVSIGGIQASRVLHQDLLHNKLR 1050 (1522)
T ss_pred HHHHHHHHHHHHHHHHHhccccccCCCCC----cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 33344445556666766663211 11110 01122344555666667777778888888999999999999999999
Q ss_pred CChhhHhccCCccHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 140 QDIGFFDTETTTGEVIGRMSGDTILIQEAMGEKVGKFIQLMSTFFGGFVVALARGWFLALVLLACLPAIVIAGGSMALIM 219 (1283)
Q Consensus 140 ~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~ 219 (1283)
.|++||++. ++|++++|+++|++.+++.+...+..++..++.+++.++++++.+|.+++++++++++++++..++.+..
T Consensus 1051 ~p~~ff~~~-~~G~ilnR~s~Di~~id~~l~~~~~~~~~~~~~~i~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1129 (1522)
T TIGR00957 1051 SPMSFFERT-PSGNLVNRFSKELDTVDSMIPPVIKMFMGSLFNVIGALIVILLATPIAAVIIPPLGLLYFFVQRFYVASS 1129 (1522)
T ss_pred CChhHhccC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999976 9999999999999999999999999999999999999888888888877766666666666666676667
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 220 SKMSSRGQIAYSEAGTVVEQTVSGIRTVSSFTGEKQAIEKYNNKLQVAYRAAVQQGMVSGIGLGVLMLTVIGTYGLAVWY 299 (1283)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (1283)
+...+..++..+.+.+.+.|+++|+++||+|++|+.+.+++.+..+...+..........+......++.. +++++.
T Consensus 1130 r~~~~~~~~~~s~l~~~~~E~l~Gi~tIraf~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 1206 (1522)
T TIGR00957 1130 RQLKRLESVSRSPVYSHFNETLLGVSVIRAFEEQERFIHQSDLKVDENQKAYYPSIVANRWLAVRLECVGN---CIVLFA 1206 (1522)
T ss_pred HHHHHHHHHHhhHHHHHHHHHhCCcHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHH
Confidence 77667777788899999999999999999999999999999888887777766555555554444333322 233334
Q ss_pred HHHHHH-hcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCCcc--cCccccEE
Q 000789 300 GSKLII-EKGYNGGTVINVIMAIMTGGMSLGQTSPCLNAFAGGQAAAYKMFETIKRKPKIDPYDTSGITL--EKIEGEIE 376 (1283)
Q Consensus 300 g~~~v~-~~~~t~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~--~~~~~~i~ 376 (1283)
|...+. .+.+++|.+.+++.|......|+..+...+..+..+.+|.+|+.++++.+++.+.......++ .+.+|.|+
T Consensus 1207 ~~~~v~~~~~~~~g~l~~~l~~~~~~~~~l~~l~~~~~~~e~~~~s~eRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~I~ 1286 (1522)
T TIGR00957 1207 ALFAVISRHSLSAGLVGLSVSYSLQVTFYLNWLVRMSSEMETNIVAVERLKEYSETEKEAPWQIQETAPPSGWPPRGRVE 1286 (1522)
T ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccccCCCCCCCCCCCCcEE
Confidence 444443 578999999999999999999999999999999999999999999998765532111111111 23568899
Q ss_pred EEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHHhcccEEE
Q 000789 377 LRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWIREKIGLV 456 (1283)
Q Consensus 377 ~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v 456 (1283)
|+||+|+|+++. .++|+|+||+|+|||++||||+||||||||+++|.|+|+|++|+|+|||+|+++++.+++|++|+||
T Consensus 1287 f~nVsf~Y~~~~-~~vL~~is~~I~~GekiaIVGrTGsGKSTL~~lL~rl~~~~~G~I~IdG~dI~~i~~~~LR~~i~iV 1365 (1522)
T TIGR00957 1287 FRNYCLRYREDL-DLVLRHINVTIHGGEKVGIVGRTGAGKSSLTLGLFRINESAEGEIIIDGLNIAKIGLHDLRFKITII 1365 (1522)
T ss_pred EEEEEEEeCCCC-cccccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCccCCCCeEEECCEEccccCHHHHHhcCeEE
Confidence 999999997542 4699999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHhcCCCEEE
Q 000789 457 SQEPILFATSLRENIAYGKENATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARAILKNPKILL 536 (1283)
Q Consensus 457 ~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARal~~~~~ill 536 (1283)
||||+||+|||||||.... +++++++++|++.+++++++.++|+||||.+||+|.+||||||||+||||||+++|+|||
T Consensus 1366 pQdp~LF~gTIr~NLdp~~-~~sdeei~~al~~a~l~~~I~~lp~GLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILi 1444 (1522)
T TIGR00957 1366 PQDPVLFSGSLRMNLDPFS-QYSDEEVWWALELAHLKTFVSALPDKLDHECAEGGENLSVGQRQLVCLARALLRKTKILV 1444 (1522)
T ss_pred CCCCcccCccHHHHcCccc-CCCHHHHHHHHHHcCcHHHHhhCccCCCceecCCCCcCCHHHHHHHHHHHHHHcCCCEEE
Confidence 9999999999999998433 589999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhccCEEEEEeCCEEeEecChhHHhcCCCChhHHHHHH
Q 000789 537 LDEATSALDAESERIVQDALVKIMTSRTTVVVAHRLTTIRNADLIAVVHQGKIVEKGTHDELIKDPEGPYTQLVRL 612 (1283)
Q Consensus 537 lDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~~~l~~~~~~~~~~~~~~ 612 (1283)
||||||+||++|++.|++.|++..+++|+|+||||++++.+||+|+||++|+|+|.|+|+||+++ ++.|+++++.
T Consensus 1445 LDEaTSalD~~Te~~Iq~~l~~~~~~~TvI~IAHRl~ti~~~DrIlVld~G~IvE~G~~~eLl~~-~~~f~~l~~~ 1519 (1522)
T TIGR00957 1445 LDEATAAVDLETDNLIQSTIRTQFEDCTVLTIAHRLNTIMDYTRVIVLDKGEVAEFGAPSNLLQQ-RGIFYSMAKD 1519 (1522)
T ss_pred EECCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHHHHHhC-CCHHHHHHHH
Confidence 99999999999999999999998899999999999999999999999999999999999999987 7999999864
No 59
>COG5265 ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=7.5e-80 Score=675.45 Aligned_cols=492 Identities=33% Similarity=0.471 Sum_probs=427.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH
Q 000789 780 YFFGVAGGKLIRRIRSLTFEKVVHQEISWFDDPANSSGSVGARLSTDASTIRSLVGDSLALVVQNIATIAAGLII-AFTA 858 (1283)
Q Consensus 780 ~~~~~~~~~~~~~lr~~~~~~ll~~~~~ff~~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~-~~~~ 858 (1283)
.++...++.+.+.+--+.|.|+.++++.|+-+ ..+|.+...+......++..+...+..++..++-+....++ ...+
T Consensus 4 ~~fs~v~q~a~r~la~~~F~h~~~Lsl~fHl~--r~TGglsR~ierGtkgI~~i~~~~l~~i~P~~~Ei~l~~vi~~~~~ 81 (497)
T COG5265 4 RLFSPVGQIAVRVLAYVTFFHLHSLSLRFHLE--RRTGGLSRAIERGTKGIETILRWILFNILPTLVEISLVAVILWRVY 81 (497)
T ss_pred HhhhHHHHHHHHHHHHHHHHHHHhcchhhhhh--cccCceeeHhhcCcccHHHHHHHHHHHhhHHHHHHHHHHHHHHhhc
Confidence 45667788888889999999999999999885 55666666665556566666666666666666654444444 4457
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHhcHHHhHHH
Q 000789 859 NWILAFVILAVSPLMLVQGYTQTKFMKGFSADAKLMYEEASQVANDAVGSIRTVASFCSEEKVMDLYEKKCEGPLKNGVR 938 (1283)
Q Consensus 859 ~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~ 938 (1283)
+|+.+++.++++.+++++............+...+..++++....+++-+.+|+|.|+.|+.+..+|.+..+.+.+...+
T Consensus 82 ~~~f~~~t~vtv~lY~~ftv~~s~wr~~~rr~~n~aDs~a~~~aidsLlnfEtvk~F~ne~~e~~r~~~~~~~Y~~a~~k 161 (497)
T COG5265 82 GWWFALTTLVTVILYLLFTVIVSDWRTDFRRLMNNADSDANAKAIDSLLNFETVKYFGNEEYEAVRYDHALETYEKAAIK 161 (497)
T ss_pred ccHHHHHHHHHHHHHHHhheeehhhhHHHHHhhhhhhhHHHHHHHHHHhhhhheeecCchhhhhhhcCchHHHHHHHHHH
Confidence 99999999998888888877666666666788888999999999999999999999999999999999999998887766
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 000789 939 RGILSGAGFGFSFLVLYCTNAFCFYIGSVLVEHGKATFGQVFKVFFALTISALGVSQTSAMAPDTTKAKDSAASIFEILD 1018 (1283)
Q Consensus 939 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~ 1018 (1283)
.....++.......+.........+.+...+..|.++.|+++....++.....|+..+...+.++.++....++++++++
T Consensus 162 ~~~Sl~~Ln~gQ~~I~~~~l~~~m~~s~~~v~~g~~TvgD~V~~Nall~qls~Plnflg~~Yrei~q~ltdme~mfdLl~ 241 (497)
T COG5265 162 VHVSLLVLNFGQTAIFSTGLRVMMTMSALGVEEGQLTVGDLVNVNALLFQLSIPLNFLGFSYREIRQALTDMEKMFDLLD 241 (497)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHhhcHHHHhhccCCchhHHhHHHHHhhhhhhhhhhHHHHHHHHHhhhhHHHHHHhhc
Confidence 54444333333344444555566677778889999999999999999999999999999999999999999999999998
Q ss_pred cCCCCCCCCCcCCccCCCcccEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcce
Q 000789 1019 SKPKIDSSKDEGMTLSSVGGAIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGH 1098 (1283)
Q Consensus 1019 ~~~~~~~~~~~~~~~~~~~g~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~ 1098 (1283)
.+.+.......+.-.+-..|.+.|+||+|.|.+ ..++|+|+||++++|+++||||+||+||||+.++|+||||+++|.
T Consensus 242 ~~~~v~d~pda~~L~~~~~g~v~F~~V~F~y~~--~r~iL~~isf~i~~g~tvAiVg~SG~gKsTI~rllfRFyD~~sG~ 319 (497)
T COG5265 242 VEAEVSDAPDAPPLWPVRLGAVAFINVSFAYDP--RRPILNGISFTIPLGKTVAIVGESGAGKSTILRLLFRFYDVNSGS 319 (497)
T ss_pred cchhhccCCCCccccccccceEEEEEEEeeccc--cchhhcCccccccCccEEEEEeCCCCcHHHHHHHHHHHhCCcCce
Confidence 876654332222111234678999999999974 468999999999999999999999999999999999999999999
Q ss_pred EEECCccCCCCChHHHhcceEEEccCCCCChhhHHHHHhcCCCCCCCHHHHHHHHHHhChHHHHHhCCCCcccccCCCCC
Q 000789 1099 VLLDNIELPKFKLSWLRQQMGLVSQEPVLFNETIRTNIAYGKQGGATEEEIIAATEASNAHNFISALPHGYETNVGERGV 1178 (1283)
Q Consensus 1099 I~idG~di~~~~~~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~ 1178 (1283)
|.|||+|++++..+++|+.||+||||..||+.|+..|+.||+ ++++++|++.|++.+++++||+++|+||||.|||+|-
T Consensus 320 I~id~qdir~vtq~slR~aIg~VPQDtvLFNDti~yni~ygr-~~at~eev~aaa~~aqi~~fi~~lP~gy~t~Vgergl 398 (497)
T COG5265 320 ITIDGQDIRDVTQQSLRRAIGIVPQDTVLFNDTIAYNIKYGR-PDATAEEVGAAAEAAQIHDFIQSLPEGYDTGVGERGL 398 (497)
T ss_pred EEEcchhHHHhHHHHHHHHhCcCcccceehhhhHHHHHhccC-ccccHHHHHHHHHHhhhhHHHHhCchhhhcccchhee
Confidence 999999999999999999999999999999999999999995 5899999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcCCceEEEEecCchHHhhcCEEEEEeCCEEEEe
Q 000789 1179 QLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQ 1258 (1283)
Q Consensus 1179 ~LSgGQrQRlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~~D~I~vl~~G~Ive~ 1258 (1283)
.||||||||+||||++|++|+||+||||||+||..||++||.+|++..+++|.++|||||+||.+||.|+||++|+|+|.
T Consensus 399 klSggekqrvaiar~ilk~p~il~~deatsaldt~te~~iq~~l~~~~~~rttlviahrlsti~~adeiivl~~g~i~er 478 (497)
T COG5265 399 KLSGGEKQRVAIARTILKNPPILILDEATSALDTHTEQAIQAALREVSAGRTTLVIAHRLSTIIDADEIIVLDNGRIVER 478 (497)
T ss_pred eccCchHHHHHHHHHHhcCCCEEEEehhhhHhhhhHHHHHHHHHHHHhCCCeEEEEeehhhhccCCceEEEeeCCEEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cChHHHHhccCchhHHHHH
Q 000789 1259 GSHDALMKITDGAYASLVA 1277 (1283)
Q Consensus 1259 Gt~~eLl~~~~g~y~~L~~ 1277 (1283)
|+|+||+++ +|.|++||.
T Consensus 479 g~h~~ll~~-~g~ya~mw~ 496 (497)
T COG5265 479 GTHEELLAA-GGLYAEMWR 496 (497)
T ss_pred CcHHHHHHc-CChHHHHhc
Confidence 999999997 999999996
No 60
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=1.3e-76 Score=799.08 Aligned_cols=540 Identities=21% Similarity=0.282 Sum_probs=418.3
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChh
Q 000789 64 GLAHPFMTLIFGHLINSFGSSDRSHVVHEVSKVAVKFLYLAAGTGIAAFLQVSCWMVTGERQATRIRGLYLKTILRQDIG 143 (1283)
Q Consensus 64 ~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~~~~~ll~~~~~ 143 (1283)
.++....++.++...|........ ...+.+.+++++++..++.+++.++..+.+.+...++|.+++++++++|++
T Consensus 928 ~~~~~~~~~wl~~w~~~~~~~~~~-----~~~~~~i~~~l~~~~~i~~~~~~~~~~~~~~~~~~~L~~~l~~~ll~~p~~ 1002 (1622)
T PLN03130 928 EVFRVSSSTWLSEWTDQGTPKTHG-----PLFYNLIYALLSFGQVLVTLLNSYWLIMSSLYAAKRLHDAMLGSILRAPMS 1002 (1622)
T ss_pred HHHHHHHHHHHHHHHhccccCCCc-----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHH
Confidence 333344455566666642211110 112233455566667778888888888999999999999999999999999
Q ss_pred hHhccCCccHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH-HHHHHHHHHHHH
Q 000789 144 FFDTETTTGEVIGRMSGDTILIQEAMGEKVGKFIQLMSTFFGGFVVALARGWFLALVLLACLPAIVI-AGGSMALIMSKM 222 (1283)
Q Consensus 144 ~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~-~~~~~~~~~~~~ 222 (1283)
||+++ ++|++++|+++|++.+++.+...+..++..++.+++.++++++++|. .++++++++++++ +..++.+..++.
T Consensus 1003 ffd~~-~~G~IlnR~s~Di~~id~~l~~~~~~~~~~~~~~i~~~i~i~~~~~~-~~~~~~pl~~~~~~~~~~~~~~~r~~ 1080 (1622)
T PLN03130 1003 FFHTN-PLGRIINRFAKDLGDIDRNVAVFVNMFLGQIFQLLSTFVLIGIVSTI-SLWAIMPLLVLFYGAYLYYQSTAREV 1080 (1622)
T ss_pred HhccC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99986 99999999999999999999998889999998888888888888874 3333333333222 223344444555
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 223 SSRGQIAYSEAGTVVEQTVSGIRTVSSFTGEKQAIEKYNNKLQVAYRAAVQQGMVSGIGLGVLMLTVIGTYGLAVWYGSK 302 (1283)
Q Consensus 223 ~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 302 (1283)
.+......+...+.+.|+++|+++||+|++++++.+++.+..+...+..........+......++ ..+++++.|..
T Consensus 1081 ~r~~~~~~s~~~~~~~Etl~Gi~tIraf~~~~~f~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~---~~~~i~~~~~~ 1157 (1622)
T PLN03130 1081 KRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMAEINGRSMDNNIRFTLVNMSSNRWLAIRLETL---GGLMIWLTASF 1157 (1622)
T ss_pred HHHHHHhcchHHHHHHHHhCCHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHH
Confidence 555556677888999999999999999999987776666555554443322222222221111111 11222222333
Q ss_pred HHHhcC-cc-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCC--CcccCcccc
Q 000789 303 LIIEKG-YN-----GGTVINVIMAIMTGGMSLGQTSPCLNAFAGGQAAAYKMFETIKRKPKIDPYDTSG--ITLEKIEGE 374 (1283)
Q Consensus 303 ~v~~~~-~t-----~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~--~~~~~~~~~ 374 (1283)
.+..+. .. .+.+..++.+.+....++..+...+..+..+.+|.+|+.++++.+++.+...... .+..+.+|.
T Consensus 1158 ~v~~~~~~~~~~~~~~~~G~~ls~~~~~~~~l~~l~~~~~~~e~~~~sveRi~e~~~~~~E~~~~~~~~~~~~~wp~~g~ 1237 (1622)
T PLN03130 1158 AVMQNGRAENQAAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGTYIDLPSEAPLVIENNRPPPGWPSSGS 1237 (1622)
T ss_pred HHHcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccccccCCCCCCCCCCCCc
Confidence 333321 10 1222223334444445555566667778899999999999998766542211111 111234678
Q ss_pred EEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHHhcccE
Q 000789 375 IELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWIREKIG 454 (1283)
Q Consensus 375 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 454 (1283)
|+|+||+|+|+++ ..++|+|+||+|+|||++|||||||||||||+++|.|+|+|++|+|+|||+|+++++.+++|++|+
T Consensus 1238 I~f~nVsf~Y~~~-~~~VL~~is~~I~~GekVaIVGrSGSGKSTLl~lL~rl~~p~~G~I~IDG~dI~~i~l~~LR~~Is 1316 (1622)
T PLN03130 1238 IKFEDVVLRYRPE-LPPVLHGLSFEISPSEKVGIVGRTGAGKSSMLNALFRIVELERGRILIDGCDISKFGLMDLRKVLG 1316 (1622)
T ss_pred EEEEEEEEEeCCC-CCceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCcCCCCCceEEECCEecccCCHHHHHhccE
Confidence 9999999999643 247999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHhcCCCE
Q 000789 455 LVSQEPILFATSLRENIAYGKENATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARAILKNPKI 534 (1283)
Q Consensus 455 ~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARal~~~~~i 534 (1283)
+|||||.||+|||||||.++. .++++++++|++.++++++++++|+||||.+||+|.+|||||||||||||||+++|+|
T Consensus 1317 iVpQdp~LF~GTIreNLd~~~-~~tdeei~~Al~~a~l~~~I~~lp~GLdt~Vge~G~nLSgGQrQrlaLARALLr~p~I 1395 (1622)
T PLN03130 1317 IIPQAPVLFSGTVRFNLDPFN-EHNDADLWESLERAHLKDVIRRNSLGLDAEVSEAGENFSVGQRQLLSLARALLRRSKI 1395 (1622)
T ss_pred EECCCCccccccHHHHhCcCC-CCCHHHHHHHHHHcCcHHHHHhCccccCccccCCCCCCCHHHHHHHHHHHHHHcCCCE
Confidence 999999999999999999986 4789999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhccCEEEEEeCCEEeEecChhHHhcCCCChhHHHHHHhh
Q 000789 535 LLLDEATSALDAESERIVQDALVKIMTSRTTVVVAHRLTTIRNADLIAVVHQGKIVEKGTHDELIKDPEGPYTQLVRLQE 614 (1283)
Q Consensus 535 lllDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~ 614 (1283)
||||||||+||++|++.|++.|++..+++|+|+||||++++.+||+|+||++|+|+|.|+|+||++++++.|+++++...
T Consensus 1396 LILDEATSaLD~~Te~~Iq~~I~~~~~~~TvI~IAHRL~tI~~~DrIlVLd~G~IvE~Gt~~eLl~~~~g~f~~L~~~~~ 1475 (1622)
T PLN03130 1396 LVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILVLDAGRVVEFDTPENLLSNEGSAFSKMVQSTG 1475 (1622)
T ss_pred EEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEeCChHHHHhCCEEEEEECCEEEEeCCHHHHHhCCCCHHHHHHHHcC
Confidence 99999999999999999999999998999999999999999999999999999999999999999876789999987654
Q ss_pred c
Q 000789 615 G 615 (1283)
Q Consensus 615 ~ 615 (1283)
.
T Consensus 1476 ~ 1476 (1622)
T PLN03130 1476 A 1476 (1622)
T ss_pred h
Confidence 3
No 61
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=1.3e-78 Score=706.71 Aligned_cols=483 Identities=29% Similarity=0.472 Sum_probs=377.2
Q ss_pred cEEEEEEEEECCCCCC-CcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCC----CceEEECCcccCCCCHHH
Q 000789 374 EIELRDVYFRYPARPE-VQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPD----AGEVLIDGIDIKKLQLKW 448 (1283)
Q Consensus 374 ~i~~~~v~f~y~~~~~-~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~----~G~i~~~g~~~~~~~~~~ 448 (1283)
-++++|++..|..... .++++||||++.+||++||||+|||||||+++.|.|+.++. +|+|.++|.|+..++.+.
T Consensus 5 lL~V~nL~v~~~~~~~~~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~dl~~l~~~~ 84 (539)
T COG1123 5 LLEVENLTVEFATDGGRVPAVRDVSFEVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGRDLLGLSERE 84 (539)
T ss_pred eEEEeceEEEEecCCcceeeeecceEEecCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCcchhcCCHHH
Confidence 5899999999975422 25899999999999999999999999999999999999987 899999999998888765
Q ss_pred Hh----cccEEEccCCC-CCcc--cHHHHHhc----CCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccc--cCCCCCCC
Q 000789 449 IR----EKIGLVSQEPI-LFAT--SLRENIAY----GKENATDQEIRTAIELANAAKFIDKLPKGLDTMA--GEHGTQLS 515 (1283)
Q Consensus 449 ~r----~~i~~v~Q~~~-l~~~--ti~~ni~~----~~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~--~~~g~~LS 515 (1283)
+| +.|+||||+|. .+|. ||.+-|.- ... .+.++.. ..+.+.++.. |+.... ...+.+||
T Consensus 85 ~r~~rg~~Ia~i~Q~p~~slnP~~tIg~Qi~E~~~~h~~-~~~~ea~-----~~a~elL~~V--gl~~~~~~~~yPheLS 156 (539)
T COG1123 85 MRKLRGKRIAMIFQDPMTSLNPVMTIGDQIREALRLHGK-GSRAEAR-----KRAVELLEQV--GLPDPERRDRYPHQLS 156 (539)
T ss_pred HHHhccccEEEEecCchhhcCchhhHHHHHHHHHHHhcc-ccHHHHH-----HHHHHHHHHc--CCCChhhhccCCcccC
Confidence 53 57999999985 4543 66655542 211 1111111 1112333332 333222 44788999
Q ss_pred hHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc--CCCeEEEEecCchhhhc-cCEEEEEeCCEEeEe
Q 000789 516 GGQKQRIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIM--TSRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEK 592 (1283)
Q Consensus 516 gGqkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~ 592 (1283)
||||||+.||+||+.+|++||+||||++||+.++.+|.+.|+++. .+.++|+|||++..+.. ||||+||++|+++|.
T Consensus 157 GG~rQRv~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~llk~l~~e~g~a~l~ITHDl~Vva~~aDrv~Vm~~G~iVE~ 236 (539)
T COG1123 157 GGMRQRVMIAMALALKPKLLIADEPTTALDVTTQAQILDLLKDLQRELGMAVLFITHDLGVVAELADRVVVMYKGEIVET 236 (539)
T ss_pred chHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHHHHHHHcCcEEEEEcCCHHHHHHhcCeEEEEECCEEEEe
Confidence 999999999999999999999999999999999999999999986 46899999999999987 999999999999999
Q ss_pred cChhHHhcCCCChhHHHHHHhhcCchhhhhhhccccccCchhhhhhhhhcCCCCCCccccccccccCCCCCCccccccCC
Q 000789 593 GTHDELIKDPEGPYTQLVRLQEGSKEAEDALATDADKLDSSFDILDKAMTRSGSRGESMRRSISRHSSGSRHSFGFTYGV 672 (1283)
Q Consensus 593 g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (1283)
|+.+++++++...|.+..-.... ..
T Consensus 237 G~~~~i~~~p~hpYT~~Ll~a~p----------------------------~~--------------------------- 261 (539)
T COG1123 237 GPTEEILSNPQHPYTRGLLAAVP----------------------------RL--------------------------- 261 (539)
T ss_pred cCHHHHHhccCCcccHHHHhhCC----------------------------Cc---------------------------
Confidence 99999998866555432210000 00
Q ss_pred CCCCCccccccCCCCCCCCchhhHhhhhhHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchh
Q 000789 673 PGPINVFETEEGDQGGAERTPLMIEKRQKLSMRRLAYLNKPEFPVLLIGSIAAGIHGVIFPIFGLLLSSSIRMFFEPEDK 752 (1283)
Q Consensus 673 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 752 (1283)
.. .. . . ...
T Consensus 262 ------~~--~~--~----~---------------------------------------------------------~~~ 270 (539)
T COG1123 262 ------GD--EK--I----I---------------------------------------------------------RLP 270 (539)
T ss_pred ------cc--cc--c----c---------------------------------------------------------ccc
Confidence 00 00 0 0 000
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChhHHHHHHhhhHHHHHH
Q 000789 753 LRKDSRFWALIYLVLGIINLIAVPFQNYFFGVAGGKLIRRIRSLTFEKVVHQEISWFDDPANSSGSVGARLSTDASTIRS 832 (1283)
Q Consensus 753 ~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~ff~~~~~~~G~l~~rl~~D~~~i~~ 832 (1283)
.
T Consensus 271 ------------------------------------------------------------~------------------- 271 (539)
T COG1123 271 ------------------------------------------------------------R------------------- 271 (539)
T ss_pred ------------------------------------------------------------c-------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhhHHH
Q 000789 833 LVGDSLALVVQNIATIAAGLIIAFTANWILAFVILAVSPLMLVQGYTQTKFMKGFSADAKLMYEEASQVANDAVGSIRTV 912 (1283)
Q Consensus 833 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tI 912 (1283)
T Consensus 272 -------------------------------------------------------------------------------- 271 (539)
T COG1123 272 -------------------------------------------------------------------------------- 271 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhccHHHHHHHHHHHHhcHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHH
Q 000789 913 ASFCSEEKVMDLYEKKCEGPLKNGVRRGILSGAGFGFSFLVLYCTNAFCFYIGSVLVEHGKATFGQVFKVFFALTISALG 992 (1283)
Q Consensus 913 ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~g~~~~~~~~~~~~~~~~~~~~ 992 (1283)
T Consensus 272 -------------------------------------------------------------------------------- 271 (539)
T COG1123 272 -------------------------------------------------------------------------------- 271 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCcCCccCCCcccEEEEEEEEECCCC--------CCcccccceeEE
Q 000789 993 VSQTSAMAPDTTKAKDSAASIFEILDSKPKIDSSKDEGMTLSSVGGAIELRCVSFKYPTR--------PDVQIFRNLCLS 1064 (1283)
Q Consensus 993 ~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~nVsf~Y~~~--------~~~~vL~~is~~ 1064 (1283)
..+. . ...-++++|++.+|..+ ....+++||||+
T Consensus 272 --------------------------~~~~---~---------~~~ll~V~~l~k~y~~~~~~~~~~~~~~~Av~~VSf~ 313 (539)
T COG1123 272 --------------------------RGPL---R---------AEPLLSVRNLSKRYGSRKGLFVRERGEVKAVDDVSFD 313 (539)
T ss_pred --------------------------cccc---c---------cCceeEeeeeeeeeccccccccccccceeeeeeeeeE
Confidence 0000 0 01148899999999842 134689999999
Q ss_pred ecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCcc--CCCCChHHHhcceEEEccCCCCC---hhhHHHHHhcC
Q 000789 1065 IPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIE--LPKFKLSWLRQQMGLVSQEPVLF---NETIRTNIAYG 1139 (1283)
Q Consensus 1065 I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~d--i~~~~~~~lR~~i~~V~Qdp~Lf---~gTIreNl~~g 1139 (1283)
+++||++||||+||||||||.++|+|+++|++|+|.++|.| .+.-....+|+++-+|+|||+-. ..||+++|.-.
T Consensus 314 l~~GE~lglVGeSGsGKSTlar~i~gL~~P~~G~i~~~g~~~~~~~~~~~~~r~~~QmvFQdp~~SLnPr~tV~~~i~ep 393 (539)
T COG1123 314 LREGETLGLVGESGSGKSTLARILAGLLPPSSGSIIFDGQDLDLTGGELRRLRRRIQMVFQDPYSSLNPRMTVGDILAEP 393 (539)
T ss_pred ecCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEEeCcccccccchhhhhhhheEEEEeCcccccCccccHHHHHHhH
Confidence 99999999999999999999999999999999999999977 33333556788999999999632 57999998621
Q ss_pred --CCCCC----CHHHHHHHHHHhChHH-HHHhCCCCcccccCCCCCCCChhHHHHHHHHHHHccCCCEEEEecccCCCCH
Q 000789 1140 --KQGGA----TEEEIIAATEASNAHN-FISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDA 1212 (1283)
Q Consensus 1140 --~~~~~----sd~ei~~al~~a~l~~-~I~~lp~Gldt~vge~G~~LSgGQrQRlaiARAll~~p~ILiLDEaTSaLD~ 1212 (1283)
..... ..+.+.+.++.+++.. +..+.| ..||||||||+||||||..+|++||+|||||+||+
T Consensus 394 L~~~~~~~~~~~~~rv~~ll~~VgL~~~~l~ryP-----------~elSGGQrQRvaIARALa~~P~lli~DEp~SaLDv 462 (539)
T COG1123 394 LRIHGGGSGAERRARVAELLELVGLPPEFLDRYP-----------HELSGGQRQRVAIARALALEPKLLILDEPVSALDV 462 (539)
T ss_pred HhhhcccchHHHHHHHHHHHHHcCCCHHHHhcCc-----------hhcCcchhHHHHHHHHHhcCCCEEEecCCccccCH
Confidence 01111 1234666677777764 444444 48999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHcC--CceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHHHhccCchhHHHHHH
Q 000789 1213 ESERVVQDALERVMV--NRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDALMKITDGAYASLVAL 1278 (1283)
Q Consensus 1213 ~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl~~~~g~y~~L~~~ 1278 (1283)
-+.+.|.+.|.++.+ +.|.|+|||+++.++. ||||+||++|+|||.|+.+++.+.+...|.+....
T Consensus 463 svqa~VlnLl~~lq~e~g~t~lfISHDl~vV~~i~drv~vm~~G~iVE~G~~~~v~~~p~h~Ytr~L~~ 531 (539)
T COG1123 463 SVQAQVLNLLKDLQEELGLTYLFISHDLAVVRYIADRVAVMYDGRIVEEGPTEKVFENPQHPYTRKLLA 531 (539)
T ss_pred HHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHhhCceEEEEECCeEEEeCCHHHHhcCCCChHHHHHHH
Confidence 999999999988754 6899999999999998 99999999999999999999999888889876544
No 62
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=7.3e-76 Score=729.33 Aligned_cols=533 Identities=22% Similarity=0.271 Sum_probs=461.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 53 MIVGTISAIGSGLAHPFMTLIFGHLINSFGSSDRSHVVHEVSKVAVKFLYLAAGTGIAAFLQVSCWMVTGERQATRIRGL 132 (1283)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~ 132 (1283)
++..++++++..++....|++++.++|.+...... ..+..+.+.++++.++..++.++..++..+.+.++..++|.+
T Consensus 8 ~~~~~~~~~~~~~~~l~~p~~~~~iid~~~~~~~~---~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~ 84 (544)
T TIGR01842 8 FIIVGLFSFVINILMLAPPLYMLQVYDRVLTSGSV---PTLLMLTVLALGLYLFLGLLDALRSFVLVRIGEKLDGALNQP 84 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCch---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44556666666777777888999999976422111 122223334444455667788888899999999999999999
Q ss_pred HHHHHHhCChhhHhccCCccHHHHHHHhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Q 000789 133 YLKTILRQDIGFFDTETTTGEVIGRMSGDTILIQEAMGE-KVGKFIQLMSTFFGGFVVALARGWFLALVLLACLPAIVIA 211 (1283)
Q Consensus 133 ~~~~ll~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~~ 211 (1283)
+|+|++++|+. ..+...+++++|++.+++.+.. .+..++..++.++ .++++++++|.+++++++.+|+++++
T Consensus 85 ~~~~ll~~~~~------~~~~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~l~li~l~~~~l~~~i 157 (544)
T TIGR01842 85 IFAASFSATLR------RGKIDGLQALRDLDQLRQFLTGPGLFAFFDAPWMPI-YLLVCFLLHPWIGILALGGAVVLVGL 157 (544)
T ss_pred HHHHHhcCccc------CccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH-HHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 99999999973 2356789999999999998876 4555555555444 44678999999999988888888777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 212 GGSMALIMSKMSSRGQIAYSEAGTVVEQTVSGIRTVSSFTGEKQAIEKYNNKLQVAYRAAVQQGMVSGIGLGVLMLTVIG 291 (1283)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (1283)
..++.++.++..++.++..++.++.+.|.++|+++||+|+.|+.+.++|++..++..+...+.....+....+..++..+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (544)
T TIGR01842 158 ALLNNRATKKPLKEATEASIRANNLADSALRNAEVIEAMGMMGNLTKRWGRFHSKYLSAQSAASDRAGMLSNLSKYFRIV 237 (544)
T ss_pred HHHhhHHHHHHHHHHHHHHHHHhhHHHHHHhcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77788888888888999999999999999999999999999999999999999998888888777777777766666666
Q ss_pred HHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCCcccCc
Q 000789 292 TYGLAVWYGSKLIIEKGYNGGTVINVIMAIMTGGMSLGQTSPCLNAFAGGQAAAYKMFETIKRKPKIDPYDTSGITLEKI 371 (1283)
Q Consensus 292 ~~~~~~~~g~~~v~~~~~t~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~ 371 (1283)
..++++++|++++.+|.+|+|.+++++.++.....|+..+...+..++++..+.+|+.++++.+++.++.. ..+..
T Consensus 238 ~~~~~~~~g~~l~~~g~it~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~----~~~~~ 313 (544)
T TIGR01842 238 LQSLVLGLGAYLAIDGEITPGMMIAGSILVGRALAPIDGAIGGWKQFSGARQAYKRLNELLANYPSRDPAM----PLPEP 313 (544)
T ss_pred HHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccCCC----CCCCC
Confidence 77778889999999999999999999999988899999999999999999999999999998655432111 11223
Q ss_pred cccEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHHhc
Q 000789 372 EGEIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWIRE 451 (1283)
Q Consensus 372 ~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~ 451 (1283)
++.|+++||+|+|++. ++++|+|+||+++|||+++||||||||||||+++|+|+|+|++|+|.+||+++.+++.+++|+
T Consensus 314 ~~~i~~~~v~~~y~~~-~~~~l~~~~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~i~~~~~~~~~~ 392 (544)
T TIGR01842 314 EGHLSVENVTIVPPGG-KKPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPPTSGSVRLDGADLKQWDRETFGK 392 (544)
T ss_pred CCeEEEEEEEEEcCCC-CccccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEehhhCCHHHHhh
Confidence 4679999999999743 347999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccEEEccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHhcC
Q 000789 452 KIGLVSQEPILFATSLRENIAYGKENATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARAILKN 531 (1283)
Q Consensus 452 ~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARal~~~ 531 (1283)
.++||||+|++|++|++|||.++.++.++++++++++.++++++++++|+|+||.+||+|.+||||||||++||||++++
T Consensus 393 ~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGq~qrl~lARall~~ 472 (544)
T TIGR01842 393 HIGYLPQDVELFPGTVAENIARFGENADPEKIIEAAKLAGVHELILRLPDGYDTVIGPGGATLSGGQRQRIALARALYGD 472 (544)
T ss_pred heEEecCCcccccccHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCCcCCCCHHHHHHHHHHHHHhcC
Confidence 99999999999999999999988777899999999999999999999999999999999999999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhccCEEEEEeCCEEeEecChhHHhc
Q 000789 532 PKILLLDEATSALDAESERIVQDALVKIM-TSRTTVVVAHRLTTIRNADLIAVVHQGKIVEKGTHDELIK 600 (1283)
Q Consensus 532 ~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~~~l~~ 600 (1283)
|++||||||||+||+++++.+.+.+.++. +++|+|+||||++.++.||+|++|++|++++.|+|+|+++
T Consensus 473 ~~ililDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~ith~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~ 542 (544)
T TIGR01842 473 PKLVVLDEPNSNLDEEGEQALANAIKALKARGITVVVITHRPSLLGCVDKILVLQDGRIARFGERDEVLA 542 (544)
T ss_pred CCEEEEeCCccccCHHHHHHHHHHHHHHhhCCCEEEEEeCCHHHHHhCCEEEEEECCEEEeeCCHHHHhh
Confidence 99999999999999999999999999885 5799999999999998999999999999999999999875
No 63
>COG5265 ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.2e-78 Score=666.03 Aligned_cols=491 Identities=30% Similarity=0.424 Sum_probs=437.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCccHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHh
Q 000789 116 SCWMVTGERQATRIRGLYLKTILRQDIGFFDTETTTGEVIGRMSGDTILIQEAMGEKVGKFIQLMSTF-FGGFVVALARG 194 (1283)
Q Consensus 116 ~~~~~~~~~~~~~lR~~~~~~ll~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~ 194 (1283)
.++...++.....+--+.|.|+.++++.|+-++ .+|.+...+......|+..+...+...+..++-+ +.++++...++
T Consensus 4 ~~fs~v~q~a~r~la~~~F~h~~~Lsl~fHl~r-~TGglsR~ierGtkgI~~i~~~~l~~i~P~~~Ei~l~~vi~~~~~~ 82 (497)
T COG5265 4 RLFSPVGQIAVRVLAYVTFFHLHSLSLRFHLER-RTGGLSRAIERGTKGIETILRWILFNILPTLVEISLVAVILWRVYG 82 (497)
T ss_pred HhhhHHHHHHHHHHHHHHHHHHHhcchhhhhhc-ccCceeeHhhcCcccHHHHHHHHHHHhhHHHHHHHHHHHHHHhhcc
Confidence 345566777777888889999999999999877 8999988888888888777777776666666544 33455567789
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHHHHHHHHH
Q 000789 195 WFLALVLLACLPAIVIAGGSMALIMSKMSSRGQIAYSEAGTVVEQTVSGIRTVSSFTGEKQAIEKYNNKLQVAYRAAVQQ 274 (1283)
Q Consensus 195 ~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~ 274 (1283)
|+.++++++++.++.++......+.....+...++.+++++...+++-+..+||.|+.|+.+..+|.+.++.+.+...+.
T Consensus 83 ~~f~~~t~vtv~lY~~ftv~~s~wr~~~rr~~n~aDs~a~~~aidsLlnfEtvk~F~ne~~e~~r~~~~~~~Y~~a~~k~ 162 (497)
T COG5265 83 WWFALTTLVTVILYLLFTVIVSDWRTDFRRLMNNADSDANAKAIDSLLNFETVKYFGNEEYEAVRYDHALETYEKAAIKV 162 (497)
T ss_pred cHHHHHHHHHHHHHHHhheeehhhhHHHHHhhhhhhhHHHHHHHHHHhhhhheeecCchhhhhhhcCchHHHHHHHHHHH
Confidence 99999999998888887766666666667778888899999999999999999999999999999999999999988887
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Q 000789 275 GMVSGIGLGVLMLTVIGTYGLAVWYGSKLIIEKGYNGGTVINVIMAIMTGGMSLGQTSPCLNAFAGGQAAAYKMFETIKR 354 (1283)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~t~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~ 354 (1283)
..-.++....-..+......+....+...+..|.+|.|+++....++++...|+..++..+..+.++..-.++++++++.
T Consensus 163 ~~Sl~~Ln~gQ~~I~~~~l~~~m~~s~~~v~~g~~TvgD~V~~Nall~qls~Plnflg~~Yrei~q~ltdme~mfdLl~~ 242 (497)
T COG5265 163 HVSLLVLNFGQTAIFSTGLRVMMTMSALGVEEGQLTVGDLVNVNALLFQLSIPLNFLGFSYREIRQALTDMEKMFDLLDV 242 (497)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHhhcHHHHhhccCCchhHHhHHHHHhhhhhhhhhhHHHHHHHHHhhhhHHHHHHhhcc
Confidence 66555555444455555566667778888999999999999999999999999999999999999999999999999988
Q ss_pred CCCCCCCCCCCCccc-CccccEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCce
Q 000789 355 KPKIDPYDTSGITLE-KIEGEIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGE 433 (1283)
Q Consensus 355 ~~~~~~~~~~~~~~~-~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~ 433 (1283)
+.+..+... .++.. ...|.+.|+||+|.|.. .+++|+|+||++++|+++|+|||||+||||++++|.|||++++|.
T Consensus 243 ~~~v~d~pd-a~~L~~~~~g~v~F~~V~F~y~~--~r~iL~~isf~i~~g~tvAiVg~SG~gKsTI~rllfRFyD~~sG~ 319 (497)
T COG5265 243 EAEVSDAPD-APPLWPVRLGAVAFINVSFAYDP--RRPILNGISFTIPLGKTVAIVGESGAGKSTILRLLFRFYDVNSGS 319 (497)
T ss_pred chhhccCCC-CccccccccceEEEEEEEeeccc--cchhhcCccccccCccEEEEEeCCCCcHHHHHHHHHHHhCCcCce
Confidence 776544322 22222 34578999999999974 468999999999999999999999999999999999999999999
Q ss_pred EEECCcccCCCCHHHHhcccEEEccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCC
Q 000789 434 VLIDGIDIKKLQLKWIREKIGLVSQEPILFATSLRENIAYGKENATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQ 513 (1283)
Q Consensus 434 i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~ 513 (1283)
|.+||+|+++...+++|+.||+||||..||++|+..||.||+|.++++|+..+++.+++++||+.+|+||+|.|||+|-.
T Consensus 320 I~id~qdir~vtq~slR~aIg~VPQDtvLFNDti~yni~ygr~~at~eev~aaa~~aqi~~fi~~lP~gy~t~Vgerglk 399 (497)
T COG5265 320 ITIDGQDIRDVTQQSLRRAIGIVPQDTVLFNDTIAYNIKYGRPDATAEEVGAAAEAAQIHDFIQSLPEGYDTGVGERGLK 399 (497)
T ss_pred EEEcchhHHHhHHHHHHHHhCcCcccceehhhhHHHHHhccCccccHHHHHHHHHHhhhhHHHHhCchhhhcccchheee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhccCEEEEEeCCEEeEec
Q 000789 514 LSGGQKQRIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMTSRTTVVVAHRLTTIRNADLIAVVHQGKIVEKG 593 (1283)
Q Consensus 514 LSgGqkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g 593 (1283)
||||||||+||||+++++|+||+|||+|||||.+||+.|+.+|++..+++|+++|+|||+|+.+||.|+||++|+|+|.|
T Consensus 400 lSggekqrvaiar~ilk~p~il~~deatsaldt~te~~iq~~l~~~~~~rttlviahrlsti~~adeiivl~~g~i~erg 479 (497)
T COG5265 400 LSGGEKQRVAIARTILKNPPILILDEATSALDTHTEQAIQAALREVSAGRTTLVIAHRLSTIIDADEIIVLDNGRIVERG 479 (497)
T ss_pred ccCchHHHHHHHHHHhcCCCEEEEehhhhHhhhhHHHHHHHHHHHHhCCCeEEEEeehhhhccCCceEEEeeCCEEEecC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhHHhcCCCChhHHHHH
Q 000789 594 THDELIKDPEGPYTQLVR 611 (1283)
Q Consensus 594 ~~~~l~~~~~~~~~~~~~ 611 (1283)
+|+||++. +|.|++||.
T Consensus 480 ~h~~ll~~-~g~ya~mw~ 496 (497)
T COG5265 480 THEELLAA-GGLYAEMWR 496 (497)
T ss_pred cHHHHHHc-CChHHHHhc
Confidence 99999998 999999985
No 64
>TIGR02857 CydD thiol reductant ABC exporter, CydD subunit. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD
Probab=100.00 E-value=1.4e-75 Score=726.22 Aligned_cols=526 Identities=24% Similarity=0.315 Sum_probs=452.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 717 VLLIGSIAAGIHGVIFPIFGLLLSSSIRMFFEPEDKLRKDSRFWALIYLVLGIINLIAVPFQNYFFGVAGGKLIRRIRSL 796 (1283)
Q Consensus 717 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~lr~~ 796 (1283)
.+.++++++++.+++.+..+++.+.+++....+... ......+..+++++.++..++.+++.++....+.++..++|.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~ 82 (529)
T TIGR02857 4 ALALLGLLGALGALLIIAQAWLLARVIDGLISAGEP-LAELLPALGALALAVLLRALLGWLGERAAARAAAAVKSQLRER 82 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCC-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555555666666667777777777654311111 1223345555666777788889999999999999999999999
Q ss_pred HHHHHHcCCccccccCCCChhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Q 000789 797 TFEKVVHQEISWFDDPANSSGSVGARLSTDASTIRSLVGDSLALVVQNIATIAAGLIIAFTANWILAFVILAVSPLMLVQ 876 (1283)
Q Consensus 797 ~~~~ll~~~~~ff~~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~l~~~pl~~~~ 876 (1283)
+|+++++.|..||++ +++|++++|+++|++.+++.+...+..++..++.+++.+++++.++|.+++++++..|+.++.
T Consensus 83 l~~~l~~~~~~~~~~--~~~g~~~~~l~~di~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~l~~~~l~~~~ 160 (529)
T TIGR02857 83 LLAAVAALGPGWLQG--RPSGELATLALEGVEALDGYFARYLPQLVLAVIIPLAILAAVFPADWISGLILLLTAPLIPIF 160 (529)
T ss_pred HHHHHHhCCchhhcc--CChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 999999999999985 899999999999999999999988888888888888889999999999999999888888777
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHhcHHHhHHHHHHHHHHHHHHHHHHHHH
Q 000789 877 GYTQTKFMKGFSADAKLMYEEASQVANDAVGSIRTVASFCSEEKVMDLYEKKCEGPLKNGVRRGILSGAGFGFSFLVLYC 956 (1283)
Q Consensus 877 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 956 (1283)
.+...+..+...++.++...+..+.+.|.++|+++||+|+.|+.+.++|.+..++..+...+..........+..++..+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (529)
T TIGR02857 161 MILIGWAAQAAARKQWAALSRLSGHFLDRLRGLPTLKLFGRAKAQAAAIARSSEEYRERTMRVLRIAFLSSAVLELFATL 240 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777777667777778888889999999999999999999999999999999888887777666665555555555555
Q ss_pred HHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCcCCccCCC
Q 000789 957 TNAFCFYIGSVLVEHGKATFGQVFKVFFALTISALGVSQTSAMAPDTTKAKDSAASIFEILDSKPKIDSSKDEGMTLSSV 1036 (1283)
Q Consensus 957 ~~~~~~~~g~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~ 1036 (1283)
...+++.++++.+..|.+++|.++++..+......|+..+...+..+..+..+.+|+.++++.+++..... ..+ +..
T Consensus 241 ~~~~~~~~~~~~~~~g~~t~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~ll~~~~~~~~~~--~~~-~~~ 317 (529)
T TIGR02857 241 SVALVAVYIGFRLLAGDLDLATGLFVLLLAPEFYLPLRQLGADYHARADGVAAAEALFAVLDAPRPLAGKA--PVT-AAP 317 (529)
T ss_pred HHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCc--CCC-CCC
Confidence 55555556666677999999999999888888999999999999999999999999999997543221111 111 112
Q ss_pred cccEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHhc
Q 000789 1037 GGAIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQ 1116 (1283)
Q Consensus 1037 ~g~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~ 1116 (1283)
.+.|+|+||+|+||++ ++++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|.+||+|+++++.+++|+
T Consensus 318 ~~~i~~~~v~f~y~~~-~~~il~~i~l~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~I~~~g~~i~~~~~~~lr~ 396 (529)
T TIGR02857 318 APSLEFSGLSVAYPGR-RAPALRPVSFTVPPGERVALVGPSGAGKSTLLNLLLGFVDPTEGSIAVNGVPLADADADSWRD 396 (529)
T ss_pred CCeEEEEEEEEECCCC-CcccccceeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEehhhCCHHHHHh
Confidence 3579999999999864 347999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEccCCCCChhhHHHHHhcCCCCCCCHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHHHHHcc
Q 000789 1117 QMGLVSQEPVLFNETIRTNIAYGKQGGATEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLK 1196 (1283)
Q Consensus 1117 ~i~~V~Qdp~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiARAll~ 1196 (1283)
+++||||||++|++||||||.++. ++++|++++++++.++++++++++|+||||.+||+|.+||||||||++||||+++
T Consensus 397 ~i~~v~Q~~~lf~~ti~~Ni~~~~-~~~~~~~i~~a~~~~~l~~~i~~lp~Gldt~v~e~g~~LSgGq~qri~laRal~~ 475 (529)
T TIGR02857 397 QIAWVPQHPFLFAGTIAENIRLAR-PDASDAEIRRALERAGLDEFVAALPQGLDTLIGEGGAGLSGGQAQRLALARAFLR 475 (529)
T ss_pred heEEEcCCCcccCcCHHHHHhccC-CCCCHHHHHHHHHHcCcHHHHHhCcccccchhccccccCCHHHHHHHHHHHHHhc
Confidence 999999999999999999999974 4689999999999999999999999999999999999999999999999999999
Q ss_pred CCCEEEEecccCCCCHHHHHHHHHHHHHHcCCceEEEEecCchHHhhcCEEEEE
Q 000789 1197 NPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVV 1250 (1283)
Q Consensus 1197 ~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~~D~I~vl 1250 (1283)
+|+|||||||||+||+++|+.|++.|++..+++|+|+||||+++++.||+|+||
T Consensus 476 ~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~~l 529 (529)
T TIGR02857 476 DAPLLLLDEPTAHLDAETEALVTEALRALAQGRTVLLVTHRLALAERADRIVVL 529 (529)
T ss_pred CCCEEEEeCcccccCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHhCCEEEeC
Confidence 999999999999999999999999999988899999999999999999999986
No 65
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=3e-75 Score=785.21 Aligned_cols=507 Identities=20% Similarity=0.288 Sum_probs=424.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCccHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 105 AGTGIAAFLQVSCWMVTGERQATRIRGLYLKTILRQDIGFFDTETTTGEVIGRMSGDTILIQEAMGEKVGKFIQLMSTFF 184 (1283)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~lR~~~~~~ll~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~i 184 (1283)
++..++.++..++....+.+...++|.++++++++.|+.||+++ ++|++++|+++|++.+++.+...+..++..++.++
T Consensus 1009 ~~~~~~~~l~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ffd~~-~~G~ilnR~s~Di~~id~~l~~~l~~~~~~~~~~i 1087 (1560)
T PTZ00243 1009 LLGTFSVPLRFFLSYEAMRRGSRNMHRDLLRSVSRGTMSFFDTT-PLGRILNRFSRDIDILDNTLPMSYLYLLQCLFSIC 1087 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhccCC-CccHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33334444444555556677788999999999999999999986 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHH
Q 000789 185 GGFVVALARGWFLALVLLACLPAIVIAGGSMALIMSKMSSRGQIAYSEAGTVVEQTVSGIRTVSSFTGEKQAIEKYNNKL 264 (1283)
Q Consensus 185 ~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~ 264 (1283)
+.++++++.+|.+.++++.++.++..+..++.+..++..+......+.+.+.+.|+++|+++||+|+.|+.+.++|.+..
T Consensus 1088 ~~li~~~~~~p~~~~~~i~~~~~~~~i~~~~~~~~r~~~r~~~~~~s~l~s~~~E~l~G~~tIraf~~e~~~~~~~~~~~ 1167 (1560)
T PTZ00243 1088 SSILVTSASQPFVLVALVPCGYLYYRLMQFYNSANREIRRIKSVAKSPVFTLLEEALQGSATITAYGKAHLVMQEALRRL 1167 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcHHHHHHHHHHcCHHHHHhCccHHHHHHHHHHHH
Confidence 88888998888554443333333344445556666666666677888899999999999999999999999999999988
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 265 QVAYRAAVQQGMVSGIGLGVLMLTVIGTYGLAVWYGSKL--IIEKGYNGGTVINVIMAIMTGGMSLGQTSPCLNAFAGGQ 342 (1283)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--v~~~~~t~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 342 (1283)
+...+..........+......++..+..+++.+++... ...+.+++|.+..++.+......++..+...+..+..+.
T Consensus 1168 d~~~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~l~~a~~l~~~l~~l~~~~~~le~~~ 1247 (1560)
T PTZ00243 1168 DVVYSCSYLENVANRWLGVRVEFLSNIVVTVIALIGVIGTMLRATSQEIGLVSLSLTMAMQTTATLNWLVRQVATVEADM 1247 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888877766655555555555544444433333334332 234457888887777887888889999999999999999
Q ss_pred HHHHHHHHHHccCCCCCCCC-------------------------CCCC----cccCccccEEEEEEEEECCCCCCCccc
Q 000789 343 AAAYKMFETIKRKPKIDPYD-------------------------TSGI----TLEKIEGEIELRDVYFRYPARPEVQIF 393 (1283)
Q Consensus 343 ~a~~ri~~~l~~~~~~~~~~-------------------------~~~~----~~~~~~~~i~~~~v~f~y~~~~~~~~l 393 (1283)
.+.+|+.++++..|+.+... .... +.++..|.|+|+||+|+|+++ ..++|
T Consensus 1248 ~s~eRi~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~f~nVsf~Y~~~-~~~vL 1326 (1560)
T PTZ00243 1248 NSVERLLYYTDEVPHEDMPELDEEVDALERRTGMAADVTGTVVIEPASPTSAAPHPVQAGSLVFEGVQMRYREG-LPLVL 1326 (1560)
T ss_pred HHHHHHHHHHhcCCccccccccccccccccccccccccccccccccCCCcccCCCCCCCCeEEEEEEEEEeCCC-CCcee
Confidence 99999999997443221000 0000 011235789999999999753 34699
Q ss_pred ccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHHhcccEEEccCCCCCcccHHHHHhc
Q 000789 394 AGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWIREKIGLVSQEPILFATSLRENIAY 473 (1283)
Q Consensus 394 ~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~ 473 (1283)
+||||+|+|||++||||+||||||||+++|+|+|+|++|+|++||+|+++++.+++|++|+||||||.||+|||||||..
T Consensus 1327 ~~vsf~I~~GekVaIVGrTGSGKSTLl~lLlrl~~p~~G~I~IDG~di~~i~l~~LR~~I~iVpQdp~LF~gTIreNIdp 1406 (1560)
T PTZ00243 1327 RGVSFRIAPREKVGIVGRTGSGKSTLLLTFMRMVEVCGGEIRVNGREIGAYGLRELRRQFSMIPQDPVLFDGTVRQNVDP 1406 (1560)
T ss_pred ecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccCCHHHHHhcceEECCCCccccccHHHHhCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHhcC-CCEEEEeCCCCCCCHHHHHHH
Q 000789 474 GKENATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARAILKN-PKILLLDEATSALDAESERIV 552 (1283)
Q Consensus 474 ~~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARal~~~-~~illlDE~ts~lD~~~~~~i 552 (1283)
+. +++++++++|++.+++++++.++|+||||.+||+|.+|||||||||||||||+++ |+|||||||||+||++|++.|
T Consensus 1407 ~~-~~sdeeI~~Al~~a~l~~~I~~lp~Gldt~vge~G~nLSgGQrQrLaLARALL~~~~~ILlLDEATSaLD~~te~~I 1485 (1560)
T PTZ00243 1407 FL-EASSAEVWAALELVGLRERVASESEGIDSRVLEGGSNYSVGQRQLMCMARALLKKGSGFILMDEATANIDPALDRQI 1485 (1560)
T ss_pred cc-CCCHHHHHHHHHHCCChHHHhhCcccccccccCCcCcCCHHHHHHHHHHHHHhcCCCCEEEEeCCCccCCHHHHHHH
Confidence 54 6889999999999999999999999999999999999999999999999999996 899999999999999999999
Q ss_pred HHHHHHHcCCCeEEEEecCchhhhccCEEEEEeCCEEeEecChhHHhcCCCChhHHHHHHhh
Q 000789 553 QDALVKIMTSRTTVVVAHRLTTIRNADLIAVVHQGKIVEKGTHDELIKDPEGPYTQLVRLQE 614 (1283)
Q Consensus 553 ~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~ 614 (1283)
++.|++..+++|+|+||||++++.+||+|+||++|+|+|.|+|+||++++++.|+++++.+.
T Consensus 1486 q~~L~~~~~~~TvI~IAHRl~ti~~~DrIlVLd~G~VvE~Gt~~eLl~~~~~~f~~l~~~~~ 1547 (1560)
T PTZ00243 1486 QATVMSAFSAYTVITIAHRLHTVAQYDKIIVMDHGAVAEMGSPRELVMNRQSIFHSMVEALG 1547 (1560)
T ss_pred HHHHHHHCCCCEEEEEeccHHHHHhCCEEEEEECCEEEEECCHHHHHhCCCCHHHHHHHHhC
Confidence 99999988899999999999999999999999999999999999999866899999987653
No 66
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=1.9e-75 Score=789.17 Aligned_cols=512 Identities=21% Similarity=0.293 Sum_probs=411.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCccHHHHHHHhHHHHHHHHHHHHHHHH
Q 000789 97 AVKFLYLAAGTGIAAFLQVSCWMVTGERQATRIRGLYLKTILRQDIGFFDTETTTGEVIGRMSGDTILIQEAMGEKVGKF 176 (1283)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~~~~~ll~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~ 176 (1283)
...+++++++..++.+++.++....+.+...++|.+++++++++|++||+++ ++|++++|+++|++.+++.+...+..+
T Consensus 953 l~~y~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~p~~ff~~~-~~G~ilnr~s~Di~~id~~l~~~~~~~ 1031 (1495)
T PLN03232 953 IVVYALLGFGQVAVTFTNSFWLISSSLHAAKRLHDAMLNSILRAPMLFFHTN-PTGRVINRFSKDIGDIDRNVANLMNMF 1031 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeeCcC-CchHHHHHhHhhHHHHHHHHHHHHHHH
Confidence 4445566666777888888888999999999999999999999999999976 999999999999999999999988888
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHH
Q 000789 177 IQLMSTFFGGFVVALARGWFLALVLLACLPAIVIAG-GSMALIMSKMSSRGQIAYSEAGTVVEQTVSGIRTVSSFTGEKQ 255 (1283)
Q Consensus 177 ~~~~~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~ 255 (1283)
+..++.+++++++++++++.. ++++++++++++.. .++.+..++..+......+...+.+.|+++|+++||+|+.++.
T Consensus 1032 ~~~~~~~i~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~~~~~~~E~l~G~~tIraf~~~~~ 1110 (1495)
T PLN03232 1032 MNQLWQLLSTFALIGTVSTIS-LWAIMPLLILFYAAYLYYQSTSREVRRLDSVTRSPIYAQFGEALNGLSSIRAYKAYDR 1110 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhcChHHHhcCCcHHH
Confidence 888888888887777777533 32222222222222 2233344445556667778889999999999999999999988
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCc----c-HHHHHHHHHHHHHHHHHHH
Q 000789 256 AIEKYNNKLQVAYRAAVQQGMVSGIGLGVLMLTVIGTYGLAVWYGSKLIIE-KGY----N-GGTVINVIMAIMTGGMSLG 329 (1283)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~-~~~----t-~g~~~~~~~~~~~~~~~l~ 329 (1283)
+.+++.+..+...+..........+...... .+..+++++.|...+.. +.+ . .+.+..++.+......++.
T Consensus 1111 ~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~ 1187 (1495)
T PLN03232 1111 MAKINGKSMDNNIRFTLANTSSNRWLTIRLE---TLGGVMIWLTATFAVLRNGNAENQAGFASTMGLLLSYTLNITTLLS 1187 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHH
Confidence 7777766655554443322222222111111 11122222223333332 322 1 1222224455555667788
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCCc--ccCccccEEEEEEEEECCCCCCCcccccceEEEeCCCEEE
Q 000789 330 QTSPCLNAFAGGQAAAYKMFETIKRKPKIDPYDTSGIT--LEKIEGEIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAA 407 (1283)
Q Consensus 330 ~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~--~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ 407 (1283)
.+...+..++.+..|.+|+.++++.+++.+.......+ .++.+|.|+|+||+|+|+++ .+++|+|+||+|+|||++|
T Consensus 1188 ~l~~~~~~~~~~~~s~eRi~e~~~~~~e~~~~~~~~~~~~~~p~~g~I~f~nVsf~Y~~~-~~~vL~~isl~I~~Gekva 1266 (1495)
T PLN03232 1188 GVLRQASKAENSLNSVERVGNYIDLPSEATAIIENNRPVSGWPSRGSIKFEDVHLRYRPG-LPPVLHGLSFFVSPSEKVG 1266 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCccccccccCCCCCCCCCCCCcEEEEEEEEEECCC-CCcccccceEEEcCCCEEE
Confidence 88888899999999999999999876654321111111 12346789999999999643 2479999999999999999
Q ss_pred EEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHHhcccEEEccCCCCCcccHHHHHhcCCCCCCHHHHHHHH
Q 000789 408 LVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWIREKIGLVSQEPILFATSLRENIAYGKENATDQEIRTAI 487 (1283)
Q Consensus 408 ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~ 487 (1283)
||||||||||||+++|.|+|+|++|+|.|||+|+++++.+++|++|+||||||+||+|||||||.++. +++++++++|+
T Consensus 1267 IVG~SGSGKSTL~~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~iVpQdp~LF~gTIr~NL~~~~-~~sdeei~~al 1345 (1495)
T PLN03232 1267 VVGRTGAGKSSMLNALFRIVELEKGRIMIDDCDVAKFGLTDLRRVLSIIPQSPVLFSGTVRFNIDPFS-EHNDADLWEAL 1345 (1495)
T ss_pred EECCCCCCHHHHHHHHhCCCcCCCceEEECCEEhhhCCHHHHHhhcEEECCCCeeeCccHHHHcCCCC-CCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999986 58999999999
Q ss_pred HHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEE
Q 000789 488 ELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMTSRTTVV 567 (1283)
Q Consensus 488 ~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~ 567 (1283)
+.++++++++++|+|+||.+||+|.+|||||||||||||||+++|+|||||||||+||++|++.|++.|++..+++|+|+
T Consensus 1346 ~~a~l~~~I~~lp~GLdt~v~e~G~~LSgGQrQrlaLARALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~~~~TvI~ 1425 (1495)
T PLN03232 1346 ERAHIKDVIDRNPFGLDAEVSEGGENFSVGQRQLLSLARALLRRSKILVLDEATASVDVRTDSLIQRTIREEFKSCTMLV 1425 (1495)
T ss_pred HHcCCHHHHHhCcCCCCceecCCCCCCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999988999999
Q ss_pred EecCchhhhccCEEEEEeCCEEeEecChhHHhcCCCChhHHHHHHhhc
Q 000789 568 VAHRLTTIRNADLIAVVHQGKIVEKGTHDELIKDPEGPYTQLVRLQEG 615 (1283)
Q Consensus 568 itH~l~~~~~~d~i~vl~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~ 615 (1283)
||||++++.+||+|+||++|+|+|.|+|+||++++++.|+++++.+..
T Consensus 1426 IAHRl~ti~~~DrIlVL~~G~ivE~Gt~~eLl~~~~~~f~~l~~~~~~ 1473 (1495)
T PLN03232 1426 IAHRLNTIIDCDKILVLSSGQVLEYDSPQELLSRDTSAFFRMVHSTGP 1473 (1495)
T ss_pred EeCCHHHHHhCCEEEEEECCEEEEECCHHHHHhCCCCHHHHHHHHhCh
Confidence 999999999999999999999999999999998855799999976543
No 67
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=6.3e-74 Score=711.98 Aligned_cols=535 Identities=22% Similarity=0.294 Sum_probs=453.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 717 VLLIGSIAAGIHGVIFPIFGLLLSSSIRMFFEPEDKLRKDSRFWALIYLVLGIINLIAVPFQNYFFGVAGGKLIRRIRSL 796 (1283)
Q Consensus 717 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~lr~~ 796 (1283)
.++...+++++..++....++++..+++......+ ......+..+++++.++..++.+++.++....+.++..++|.+
T Consensus 7 ~~~~~~~~~~~~~~~~l~~p~~~~~iid~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~ 84 (544)
T TIGR01842 7 TFIIVGLFSFVINILMLAPPLYMLQVYDRVLTSGS--VPTLLMLTVLALGLYLFLGLLDALRSFVLVRIGEKLDGALNQP 84 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCc--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444444444445555566666654432111 1122334445555666777888889999999999999999999
Q ss_pred HHHHHHcCCccccccCCCChhHHHHHHhhhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Q 000789 797 TFEKVVHQEISWFDDPANSSGSVGARLSTDASTIRSLVGD-SLALVVQNIATIAAGLIIAFTANWILAFVILAVSPLMLV 875 (1283)
Q Consensus 797 ~~~~ll~~~~~ff~~~~~~~G~l~~rl~~D~~~i~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~l~~~pl~~~ 875 (1283)
+|+++++.|+.. .+...+++.+|++.+++.+.. .+..++..++.++ .+++++.++|++++++++..|++++
T Consensus 85 ~~~~ll~~~~~~-------~~~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~l~li~l~~~~l~~~ 156 (544)
T TIGR01842 85 IFAASFSATLRR-------GKIDGLQALRDLDQLRQFLTGPGLFAFFDAPWMPI-YLLVCFLLHPWIGILALGGAVVLVG 156 (544)
T ss_pred HHHHHhcCcccC-------ccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH-HHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 999999999843 245688899999999988776 4555555545444 4467788999999988888888777
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHhcHHHhHHHHHHHHHHHHHHHHHHHH
Q 000789 876 QGYTQTKFMKGFSADAKLMYEEASQVANDAVGSIRTVASFCSEEKVMDLYEKKCEGPLKNGVRRGILSGAGFGFSFLVLY 955 (1283)
Q Consensus 876 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 955 (1283)
..++..+..++..++.++...+..+.+.|.++|+++||+|+.++.+.++|.+..++..+...+.....+....+..++..
T Consensus 157 i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (544)
T TIGR01842 157 LALLNNRATKKPLKEATEASIRANNLADSALRNAEVIEAMGMMGNLTKRWGRFHSKYLSAQSAASDRAGMLSNLSKYFRI 236 (544)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHhcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 76666677676677777888888999999999999999999999999999999999888888777777777777777777
Q ss_pred HHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCcCCccCC
Q 000789 956 CTNAFCFYIGSVLVEHGKATFGQVFKVFFALTISALGVSQTSAMAPDTTKAKDSAASIFEILDSKPKIDSSKDEGMTLSS 1035 (1283)
Q Consensus 956 ~~~~~~~~~g~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~ 1035 (1283)
+..++++++|++++..|.+++|.++++..+......|+..+...+..+..+..+.+|+.++++.+++.... .+.+.
T Consensus 237 ~~~~~~~~~g~~l~~~g~it~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~----~~~~~ 312 (544)
T TIGR01842 237 VLQSLVLGLGAYLAIDGEITPGMMIAGSILVGRALAPIDGAIGGWKQFSGARQAYKRLNELLANYPSRDPA----MPLPE 312 (544)
T ss_pred HHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccCC----CCCCC
Confidence 77788889999999999999999999999999999999999999999999999999999999765543211 11122
Q ss_pred CcccEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHh
Q 000789 1036 VGGAIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLR 1115 (1283)
Q Consensus 1036 ~~g~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR 1115 (1283)
..+.|+++||+|+|++. +.++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|.+||+|+.+++.+.+|
T Consensus 313 ~~~~i~~~~v~~~y~~~-~~~~l~~~~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~i~~~~~~~~~ 391 (544)
T TIGR01842 313 PEGHLSVENVTIVPPGG-KKPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPPTSGSVRLDGADLKQWDRETFG 391 (544)
T ss_pred CCCeEEEEEEEEEcCCC-CccccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEehhhCCHHHHh
Confidence 34579999999999753 34799999999999999999999999999999999999999999999999999999999999
Q ss_pred cceEEEccCCCCChhhHHHHHhcCCCCCCCHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHHHHHc
Q 000789 1116 QQMGLVSQEPVLFNETIRTNIAYGKQGGATEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVL 1195 (1283)
Q Consensus 1116 ~~i~~V~Qdp~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiARAll 1195 (1283)
++++||||||.+|++|++|||.++. +++++++++++++.++++++++++|+|+||.+||+|.+|||||||||+||||++
T Consensus 392 ~~i~~v~q~~~lf~~ti~~Ni~~~~-~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGq~qrl~lARall 470 (544)
T TIGR01842 392 KHIGYLPQDVELFPGTVAENIARFG-ENADPEKIIEAAKLAGVHELILRLPDGYDTVIGPGGATLSGGQRQRIALARALY 470 (544)
T ss_pred hheEEecCCcccccccHHHHHhccC-CCCCHHHHHHHHHHhChHHHHHhCccccccccCCCcCCCCHHHHHHHHHHHHHh
Confidence 9999999999999999999999763 458999999999999999999999999999999999999999999999999999
Q ss_pred cCCCEEEEecccCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchHHhhcCEEEEEeCCEEEEecChHHHHhc
Q 000789 1196 KNPKILLLDEATSALDAESERVVQDALERVM-VNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALMKI 1267 (1283)
Q Consensus 1196 ~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHrl~ti~~~D~I~vl~~G~Ive~Gt~~eLl~~ 1267 (1283)
++|+|||||||||+||+++++.+.+.|++.. +++|+|+||||++++..||+|++|++|+++|.|+|+||+++
T Consensus 471 ~~~~ililDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~ith~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~ 543 (544)
T TIGR01842 471 GDPKLVVLDEPNSNLDEEGEQALANAIKALKARGITVVVITHRPSLLGCVDKILVLQDGRIARFGERDEVLAK 543 (544)
T ss_pred cCCCEEEEeCCccccCHHHHHHHHHHHHHHhhCCCEEEEEeCCHHHHHhCCEEEEEECCEEEeeCCHHHHhhc
Confidence 9999999999999999999999999999875 68999999999999999999999999999999999999863
No 68
>TIGR01194 cyc_pep_trnsptr cyclic peptide transporter. This model describes cyclic peptide transporter in bacteria. Bacteria have elaborate pathways for the production of toxins and secondary metabolites. Many such compounds, including syringomycin and pyoverdine are synthesized on non-ribosomal templates consisting of a multienzyme complex. On several occasions the proteins of the complex and transporter protein are present on the same operon. Often times these compounds cross the biological membrane by specific transporters. Syringomycin is an amphipathic, cylclic lipodepsipeptide when inserted into host causes formation of channels, permeable to variety of cations. On the other hand, pyoverdine is a cyclic octa-peptidyl dihydroxyquinoline, which is efficient in sequestering iron for uptake.
Probab=100.00 E-value=8.6e-73 Score=701.32 Aligned_cols=535 Identities=17% Similarity=0.139 Sum_probs=445.2
Q ss_pred hhHHHHHHhhc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 36 VPFYKLFAFAD-KQDAVLMIVGTISAIGSGLAHPFMTLIFGHLINSFGSSDRSHVVHEVSKVAVKFLYLAAGTGIAAFLQ 114 (1283)
Q Consensus 36 ~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (1283)
..+++++++++ ++ +..++++++++++.++.....|++++.++|....... .. ..+++++.++.+++.++.
T Consensus 3 ~~~~~l~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~----~~----~~~~~~~~~~~~~~~~~~ 73 (555)
T TIGR01194 3 AAIGEILALLRSPF-PAITAFSIALGLAGGLAIIALLASINNAIHEENFLGQ----GS----LFSFGGLCLLALLFRIGA 73 (555)
T ss_pred chHHHHHHHHhhcc-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc----hH----HHHHHHHHHHHHHHHHHH
Confidence 45778888887 65 4456677777777788888888888888874211100 01 112333445556778888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCccHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000789 115 VSCWMVTGERQATRIRGLYLKTILRQDIGFFDTETTTGEVIGRMSGDTILIQEAMGEKVGKFIQLMSTFFGGFVVALARG 194 (1283)
Q Consensus 115 ~~~~~~~~~~~~~~lR~~~~~~ll~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 194 (1283)
.++....+.++..++|.++|+|++++|+.+|++. ++|++++|+++|++.+++++.. +..++..++++++.++++++++
T Consensus 74 ~~~~~~~~~~~~~~lR~~l~~~l~~~~~~~~~~~-~~G~l~srl~~Dv~~i~~~~~~-~~~~~~~~~~~~~~~~~l~~~~ 151 (555)
T TIGR01194 74 DIFPAYAGMHIIANLRIALCEKILGAPIEEIDRR-GAHNLIPLLTHDIDQINAFLFI-FPPIAIALAIFFFCIAYLAYLS 151 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHhc-CcchhhHHHhhhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHh
Confidence 8999999999999999999999999999999986 9999999999999999998864 6777888888888899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHH--HHHHHHHHHHHHHHHHHH
Q 000789 195 WFLALVLLACLPAIVIAGGSMALIMSKMSSRGQIAYSEAGTVVEQTVSGIRTVSSFTGEK--QAIEKYNNKLQVAYRAAV 272 (1283)
Q Consensus 195 ~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~--~~~~~~~~~~~~~~~~~~ 272 (1283)
|.+++++++++|+.+++..++.++.++...+.++..++.++.+.|.+.|+++||+|+.++ .+.++|.+..++..+...
T Consensus 152 ~~L~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (555)
T TIGR01194 152 VPMFAITISAIIIGTAAQLLAFMGGFKFFHAARDEEDAFNEHTHAIAFGAKELKIHGIRRLSFAHGAIQESANNIADLHI 231 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhHHHHHhcCHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 999999998888888888788888888888889999999999999999999999999954 567888888888877776
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 273 QQGMVSGIGLGVLMLTVIGTYGLAVWYGSKLIIEKGYNGGTVINVIMAIMTGGMSLGQTSPCLNAFAGGQAAAYKMFETI 352 (1283)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~t~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l 352 (1283)
+.........++..++..+...+++++|++. +.++.|++++++++......|+..+...+..++++.++++|+.+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~t~g~l~a~~~~~~~l~~pi~~l~~~~~~~~~a~~s~~ri~~ll 308 (555)
T TIGR01194 232 IEILIFIAAENFGQLLFFLLIGCALFAAAMF---ASIDAAAISAFVLALLYIKGPLEMLVSALPILAQAQIACQRLADFG 308 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6665555544444444444444455555543 6899999999999999999999999999999999999999999998
Q ss_pred ccCCC---CCC-CCCCCC---cccCccccEEEEEEEEECCCCC--CCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHH
Q 000789 353 KRKPK---IDP-YDTSGI---TLEKIEGEIELRDVYFRYPARP--EVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLV 423 (1283)
Q Consensus 353 ~~~~~---~~~-~~~~~~---~~~~~~~~i~~~~v~f~y~~~~--~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll 423 (1283)
+.+++ ..+ ...... ++....+.|+++||+|+|++.+ +.++|+|+||++++||++|||||||||||||+++|
T Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~~~l~~vs~~i~~G~~~aivG~sGsGKSTl~~ll 388 (555)
T TIGR01194 309 ERFNEPEPELELSDADNVLLLAHDKSVDSIELKDVHMNPKAPEGSEGFALGPIDLRIAQGDIVFIVGENGCGKSTLAKLF 388 (555)
T ss_pred hhhccccccccccccccccccccCCCCceEEEEEEEEEeCCCCCCcCceeccceEEEcCCcEEEEECCCCCCHHHHHHHH
Confidence 63211 110 000000 1112246799999999997532 23699999999999999999999999999999999
Q ss_pred HcCCCCCCceEEECCcccCCCCHHHHhcccEEEccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCc
Q 000789 424 ERFYDPDAGEVLIDGIDIKKLQLKWIREKIGLVSQEPILFATSLRENIAYGKENATDQEIRTAIELANAAKFIDKLPKGL 503 (1283)
Q Consensus 424 ~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~lp~g~ 503 (1283)
+|+|+|++|+|.+||+|+++++.+++|++++||+||+++|++|+++|+ .+++++++++++++.++++++++.+|+||
T Consensus 389 ~g~~~p~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~lf~~ti~~n~---~~~~~~~~~~~~~~~~~l~~~~~~lp~g~ 465 (555)
T TIGR01194 389 CGLYIPQEGEILLDGAAVSADSRDDYRDLFSAIFADFHLFDDLIGPDE---GEHASLDNAQQYLQRLEIADKVKIEDGGF 465 (555)
T ss_pred hCCCCCCCcEEEECCEECCCCCHHHHHhhCcEEccChhhhhhhhhccc---ccchhHHHHHHHHHHcCCchhhccccccc
Confidence 999999999999999999999999999999999999999999999995 45678899999999999999999999999
Q ss_pred cccccCCCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHH-HH-cCCCeEEEEecCchhhhccCEE
Q 000789 504 DTMAGEHGTQLSGGQKQRIAIARAILKNPKILLLDEATSALDAESERIVQDALV-KI-MTSRTTVVVAHRLTTIRNADLI 581 (1283)
Q Consensus 504 ~t~~~~~g~~LSgGqkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~-~~-~~~~t~i~itH~l~~~~~~d~i 581 (1283)
||. .+|||||||||+||||++++|+|||||||||+||+++++.+++.+. .+ .+++|+|+||||+++++.||+|
T Consensus 466 ~t~-----~~LSgGq~qRlalaRall~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tiiiisH~~~~~~~~d~i 540 (555)
T TIGR01194 466 STT-----TALSTGQQKRLALICAWLEDRPILLFDEWAADQDPAFKRFFYEELLPDLKRQGKTIIIISHDDQYFELADQI 540 (555)
T ss_pred CCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHhCCEE
Confidence 994 7899999999999999999999999999999999999999988764 34 3589999999999999999999
Q ss_pred EEEeCCEEeEe
Q 000789 582 AVVHQGKIVEK 592 (1283)
Q Consensus 582 ~vl~~G~i~~~ 592 (1283)
++|++|+|+|.
T Consensus 541 ~~l~~G~i~~~ 551 (555)
T TIGR01194 541 IKLAAGCIVKD 551 (555)
T ss_pred EEEECCEEEEe
Confidence 99999999874
No 69
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-74 Score=722.49 Aligned_cols=499 Identities=25% Similarity=0.378 Sum_probs=370.1
Q ss_pred cEEEEEEEEECCCCC-CCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccC----------
Q 000789 374 EIELRDVYFRYPARP-EVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIK---------- 442 (1283)
Q Consensus 374 ~i~~~~v~f~y~~~~-~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~---------- 442 (1283)
-|+++|++++|+... ..++|+||||++++||++|||||||||||||+++|+|+++|++|+|.++|+++.
T Consensus 12 ~l~v~~l~~~y~~~~~~~~~l~~is~~v~~Ge~~~lvG~nGsGKSTLl~~l~Gll~p~~G~i~~~g~~~~~~~~~~~~~~ 91 (623)
T PRK10261 12 VLAVENLNIAFMQEQQKIAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQAGGLVQCDKMLLRRRSRQVIELS 91 (623)
T ss_pred eEEEeceEEEecCCCCceeEEEeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCeEEEECCEEeccccccccccc
Confidence 599999999996321 246999999999999999999999999999999999999999999999997542
Q ss_pred CCCHH---HHh-cccEEEccCC--CCCc-ccHHHHHhcCCC---CCCHHHHHHHHHHhcHHHHHHhCCCCcc---ccccC
Q 000789 443 KLQLK---WIR-EKIGLVSQEP--ILFA-TSLRENIAYGKE---NATDQEIRTAIELANAAKFIDKLPKGLD---TMAGE 509 (1283)
Q Consensus 443 ~~~~~---~~r-~~i~~v~Q~~--~l~~-~ti~~ni~~~~~---~~~~~~~~~~~~~~~~~~~i~~lp~g~~---t~~~~ 509 (1283)
+.+.. .+| ++||||+|+| .+++ .||+||+.++.. ..+..+.. ..+.+.++.+ |+. .....
T Consensus 92 ~~~~~~~~~~r~~~ig~v~Q~~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~~l~~~--gL~~~~~~~~~ 164 (623)
T PRK10261 92 EQSAAQMRHVRGADMAMIFQEPMTSLNPVFTVGEQIAESIRLHQGASREEAM-----VEAKRMLDQV--RIPEAQTILSR 164 (623)
T ss_pred cCCHHHHHHHhCCCEEEEEeCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHC--CCCChhhHHhC
Confidence 22222 233 4799999998 5776 499999987531 12222211 1223444444 553 34567
Q ss_pred CCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhc-cCEEEEEeC
Q 000789 510 HGTQLSGGQKQRIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMT--SRTTVVVAHRLTTIRN-ADLIAVVHQ 586 (1283)
Q Consensus 510 ~g~~LSgGqkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~ 586 (1283)
...+|||||||||+|||||+.+|++|||||||++||+.+.+.+.+.++++.+ ++|+|+|||+++.+.. ||+|++|++
T Consensus 165 ~~~~LSgGq~QRv~iA~AL~~~P~lLllDEPt~~LD~~~~~~l~~ll~~l~~~~g~tvi~itHdl~~~~~~adri~vl~~ 244 (623)
T PRK10261 165 YPHQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQKEMSMGVIFITHDMGVVAEIADRVLVMYQ 244 (623)
T ss_pred CCccCCHHHHHHHHHHHHHhCCCCEEEEeCCCCccCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEeeC
Confidence 7889999999999999999999999999999999999999999999999853 7899999999999866 999999999
Q ss_pred CEEeEecChhHHhcCCCChhHHHHHHhhcCchhhhhhhccccccCchhhhhhhhhcCCCCCCccccccccccCCCCCCcc
Q 000789 587 GKIVEKGTHDELIKDPEGPYTQLVRLQEGSKEAEDALATDADKLDSSFDILDKAMTRSGSRGESMRRSISRHSSGSRHSF 666 (1283)
Q Consensus 587 G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 666 (1283)
|+|++.|++++++..+...|.+-.... . +.. .. .
T Consensus 245 G~i~~~g~~~~~~~~~~~~~~~~l~~~-----------------~-----------~~~------~~-~----------- 278 (623)
T PRK10261 245 GEAVETGSVEQIFHAPQHPYTRALLAA-----------------V-----------PQL------GA-M----------- 278 (623)
T ss_pred CeecccCCHHHhhcCCCChhhhhhhhc-----------------c-----------Ccc------cc-c-----------
Confidence 999999999888654222221100000 0 000 00 0
Q ss_pred ccccCCCCCCCccccccCCCCCCCCchhhHhhhhhHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000789 667 GFTYGVPGPINVFETEEGDQGGAERTPLMIEKRQKLSMRRLAYLNKPEFPVLLIGSIAAGIHGVIFPIFGLLLSSSIRMF 746 (1283)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 746 (1283)
.+ . .
T Consensus 279 ------~~---------~--~----------------------------------------------------------- 282 (623)
T PRK10261 279 ------KG---------L--D----------------------------------------------------------- 282 (623)
T ss_pred ------cc---------c--c-----------------------------------------------------------
Confidence 00 0 0
Q ss_pred cCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChhHHHHHHhhh
Q 000789 747 FEPEDKLRKDSRFWALIYLVLGIINLIAVPFQNYFFGVAGGKLIRRIRSLTFEKVVHQEISWFDDPANSSGSVGARLSTD 826 (1283)
Q Consensus 747 ~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~ff~~~~~~~G~l~~rl~~D 826 (1283)
.+ .-+.. ..
T Consensus 283 ---------------------------------------------------------~~-~~~~~--~~----------- 291 (623)
T PRK10261 283 ---------------------------------------------------------YP-RRFPL--IS----------- 291 (623)
T ss_pred ---------------------------------------------------------CC-ccccc--cc-----------
Confidence 00 00000 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Q 000789 827 ASTIRSLVGDSLALVVQNIATIAAGLIIAFTANWILAFVILAVSPLMLVQGYTQTKFMKGFSADAKLMYEEASQVANDAV 906 (1283)
Q Consensus 827 ~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l 906 (1283)
T Consensus 292 -------------------------------------------------------------------------------- 291 (623)
T PRK10261 292 -------------------------------------------------------------------------------- 291 (623)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhHHHHHhccHHHHHHHHHHHHhcHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHH
Q 000789 907 GSIRTVASFCSEEKVMDLYEKKCEGPLKNGVRRGILSGAGFGFSFLVLYCTNAFCFYIGSVLVEHGKATFGQVFKVFFAL 986 (1283)
Q Consensus 907 ~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~g~~~~~~~~~~~~~~ 986 (1283)
. ...
T Consensus 292 ------------------------~-~~~--------------------------------------------------- 295 (623)
T PRK10261 292 ------------------------L-EHP--------------------------------------------------- 295 (623)
T ss_pred ------------------------c-ccc---------------------------------------------------
Confidence 0 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCcCCccCCCcccEEEEEEEEECCCCC--------Ccccc
Q 000789 987 TISALGVSQTSAMAPDTTKAKDSAASIFEILDSKPKIDSSKDEGMTLSSVGGAIELRCVSFKYPTRP--------DVQIF 1058 (1283)
Q Consensus 987 ~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~nVsf~Y~~~~--------~~~vL 1058 (1283)
+ ...++...... +....-|+++||+++|+.+. ...+|
T Consensus 296 -------------------------~----~~~~~~~~~~~------~~~~~~L~~~~l~~~y~~~~~~~~~~~~~~~~l 340 (623)
T PRK10261 296 -------------------------A----KQEPPIEQDTV------VDGEPILQVRNLVTRFPLRSGLLNRVTREVHAV 340 (623)
T ss_pred -------------------------c----ccCcccccccc------cCCCceEEEeeeEEEEcCCCccccccCCceEEE
Confidence 0 00000000000 00012499999999996321 23699
Q ss_pred cceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChH---HHhcceEEEccCC--CCC-hhhH
Q 000789 1059 RNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLS---WLRQQMGLVSQEP--VLF-NETI 1132 (1283)
Q Consensus 1059 ~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~---~lR~~i~~V~Qdp--~Lf-~gTI 1132 (1283)
+||||+|++||++||+|+||||||||+++|+|+.+|++|+|.++|.++...+.. .+|++|+||||+| .++ ..|+
T Consensus 341 ~~vs~~i~~Ge~~~lvG~nGsGKSTLlk~i~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~~~i~~v~Q~~~~~l~~~~tv 420 (623)
T PRK10261 341 EKVSFDLWPGETLSLVGESGSGKSTTGRALLRLVESQGGEIIFNGQRIDTLSPGKLQALRRDIQFIFQDPYASLDPRQTV 420 (623)
T ss_pred eeeEeEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCcEEEECCEECCcCCHHHHHHhcCCeEEEecCchhhcCCCCCH
Confidence 999999999999999999999999999999999999999999999999876543 4678899999998 366 4699
Q ss_pred HHHHhcCCC-CCC-C----HHHHHHHHHHhChH-HHHHhCCCCcccccCCCCCCCChhHHHHHHHHHHHccCCCEEEEec
Q 000789 1133 RTNIAYGKQ-GGA-T----EEEIIAATEASNAH-NFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDE 1205 (1283)
Q Consensus 1133 reNl~~g~~-~~~-s----d~ei~~al~~a~l~-~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiARAll~~p~ILiLDE 1205 (1283)
.||+.++.. ... + .+++.+.++.+++. +.... ...+||||||||++|||||+.+|+||||||
T Consensus 421 ~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~~-----------~~~~LSgGqrQRv~iAraL~~~p~llllDE 489 (623)
T PRK10261 421 GDSIMEPLRVHGLLPGKAAAARVAWLLERVGLLPEHAWR-----------YPHEFSGGQRQRICIARALALNPKVIIADE 489 (623)
T ss_pred HHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCCHHHhhC-----------CcccCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 999975310 011 1 23455566666663 33322 234799999999999999999999999999
Q ss_pred ccCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHHHhccCchhHH
Q 000789 1206 ATSALDAESERVVQDALERVMV--NRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDALMKITDGAYAS 1274 (1283)
Q Consensus 1206 aTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl~~~~g~y~~ 1274 (1283)
|||+||+.+...|.+.|+++.+ +.|+|+|||+++.+.. ||+|++|++|+|++.|+++++...+...|.+
T Consensus 490 Pts~LD~~~~~~i~~ll~~l~~~~g~tvi~isHdl~~v~~~~dri~vl~~G~iv~~g~~~~i~~~p~~~~~~ 561 (623)
T PRK10261 490 AVSALDVSIRGQIINLLLDLQRDFGIAYLFISHDMAVVERISHRVAVMYLGQIVEIGPRRAVFENPQHPYTR 561 (623)
T ss_pred CcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhcCCCCHHHH
Confidence 9999999999999999988753 6899999999999976 9999999999999999999998765566654
No 70
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.5e-74 Score=706.41 Aligned_cols=463 Identities=21% Similarity=0.371 Sum_probs=359.3
Q ss_pred cEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCC--CCceEEECCcccCCCCHHH-Hh
Q 000789 374 EIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDP--DAGEVLIDGIDIKKLQLKW-IR 450 (1283)
Q Consensus 374 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~--~~G~i~~~g~~~~~~~~~~-~r 450 (1283)
.|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.++...+... .|
T Consensus 5 ~l~~~nl~~~~~~---~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~ 81 (506)
T PRK13549 5 LLEMKNITKTFGG---VKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEELQASNIRDTER 81 (506)
T ss_pred eEEEeeeEEEeCC---eEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHH
Confidence 4899999999963 3699999999999999999999999999999999999996 8999999999998766543 46
Q ss_pred cccEEEccCCCCCcc-cHHHHHhcCCCC-----CCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHH
Q 000789 451 EKIGLVSQEPILFAT-SLRENIAYGKEN-----ATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAI 524 (1283)
Q Consensus 451 ~~i~~v~Q~~~l~~~-ti~~ni~~~~~~-----~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriai 524 (1283)
+.++||+|++.+|.. |++||+.++... .+.++..+ .+.++++.+ |++........+||||||||++|
T Consensus 82 ~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgGqkqrv~l 154 (506)
T PRK13549 82 AGIAIIHQELALVKELSVLENIFLGNEITPGGIMDYDAMYL-----RAQKLLAQL--KLDINPATPVGNLGLGQQQLVEI 154 (506)
T ss_pred CCeEEEEeccccCCCCcHHHHhhhcccccccCCcCHHHHHH-----HHHHHHHHc--CCCCCcccchhhCCHHHHHHHHH
Confidence 789999999988865 999999986431 12222111 234556665 66666677788999999999999
Q ss_pred HHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHHhcCC
Q 000789 525 ARAILKNPKILLLDEATSALDAESERIVQDALVKIM-TSRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDELIKDP 602 (1283)
Q Consensus 525 ARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~~ 602 (1283)
||||+.+|+|||||||||+||+.+...+.+.|.++. +++|+|+|||+++.+.. ||+|++|++|++++.|+.+++...
T Consensus 155 a~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~- 233 (506)
T PRK13549 155 AKALNKQARLLILDEPTASLTESETAVLLDIIRDLKAHGIACIYISHKLNEVKAISDTICVIRDGRHIGTRPAAGMTED- 233 (506)
T ss_pred HHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHHhcCEEEEEECCEEeeecccccCCHH-
Confidence 999999999999999999999999999999999875 46899999999999876 999999999999987753322100
Q ss_pred CChhHHHHHHhhcCchhhhhhhccccccCchhhhhhhhhcCCCCCCccccccccccCCCCCCccccccCCCCCCCccccc
Q 000789 603 EGPYTQLVRLQEGSKEAEDALATDADKLDSSFDILDKAMTRSGSRGESMRRSISRHSSGSRHSFGFTYGVPGPINVFETE 682 (1283)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 682 (1283)
+...
T Consensus 234 -----~~~~----------------------------------------------------------------------- 237 (506)
T PRK13549 234 -----DIIT----------------------------------------------------------------------- 237 (506)
T ss_pred -----HHHH-----------------------------------------------------------------------
Confidence 0000
Q ss_pred cCCCCCCCCchhhHhhhhhHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhhhhHHHHH
Q 000789 683 EGDQGGAERTPLMIEKRQKLSMRRLAYLNKPEFPVLLIGSIAAGIHGVIFPIFGLLLSSSIRMFFEPEDKLRKDSRFWAL 762 (1283)
Q Consensus 683 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 762 (1283)
.
T Consensus 238 --------------------------------------------------------------~----------------- 238 (506)
T PRK13549 238 --------------------------------------------------------------M----------------- 238 (506)
T ss_pred --------------------------------------------------------------H-----------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChhHHHHHHhhhHHHHHHHHHHHHHHHH
Q 000789 763 IYLVLGIINLIAVPFQNYFFGVAGGKLIRRIRSLTFEKVVHQEISWFDDPANSSGSVGARLSTDASTIRSLVGDSLALVV 842 (1283)
Q Consensus 763 ~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~ff~~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~ 842 (1283)
. +.. .
T Consensus 239 --------------------------------------~-------~~~-~----------------------------- 243 (506)
T PRK13549 239 --------------------------------------M-------VGR-E----------------------------- 243 (506)
T ss_pred --------------------------------------h-------hCc-C-----------------------------
Confidence 0 000 0
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHH
Q 000789 843 QNIATIAAGLIIAFTANWILAFVILAVSPLMLVQGYTQTKFMKGFSADAKLMYEEASQVANDAVGSIRTVASFCSEEKVM 922 (1283)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~ 922 (1283)
T Consensus 244 -------------------------------------------------------------------------------- 243 (506)
T PRK13549 244 -------------------------------------------------------------------------------- 243 (506)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHhcHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 923 DLYEKKCEGPLKNGVRRGILSGAGFGFSFLVLYCTNAFCFYIGSVLVEHGKATFGQVFKVFFALTISALGVSQTSAMAPD 1002 (1283)
Q Consensus 923 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1002 (1283)
. .
T Consensus 244 ---------------------------------------------------~--~------------------------- 245 (506)
T PRK13549 244 ---------------------------------------------------L--T------------------------- 245 (506)
T ss_pred ---------------------------------------------------c--c-------------------------
Confidence 0 0
Q ss_pred HHHHHHHHHHHHHHhccCCCCCCCCCcCCccCCCcccEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHH
Q 000789 1003 TTKAKDSAASIFEILDSKPKIDSSKDEGMTLSSVGGAIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKS 1082 (1283)
Q Consensus 1003 ~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKS 1082 (1283)
+ ..+..... + ....|+++||+++|+.....++|+|+||+|++||++||+|+||||||
T Consensus 246 ---------~------~~~~~~~~-------~-~~~~l~~~~l~~~~~~~~~~~vl~~vsl~i~~Ge~~~l~G~NGsGKS 302 (506)
T PRK13549 246 ---------A------LYPREPHT-------I-GEVILEVRNLTAWDPVNPHIKRVDDVSFSLRRGEILGIAGLVGAGRT 302 (506)
T ss_pred ---------c------cccccccC-------C-CCceEEEecCccccccccccccccceeeEEcCCcEEEEeCCCCCCHH
Confidence 0 00000000 0 01148999999999532134699999999999999999999999999
Q ss_pred HHHHHHhccCC-CCcceEEECCccCCCCCh-HHHhcceEEEccCC---CCC-hhhHHHHHhcCCCCC------CCHHHHH
Q 000789 1083 TVIALIERFYD-PDSGHVLLDNIELPKFKL-SWLRQQMGLVSQEP---VLF-NETIRTNIAYGKQGG------ATEEEII 1150 (1283)
Q Consensus 1083 TL~~lL~rl~~-~~~G~I~idG~di~~~~~-~~lR~~i~~V~Qdp---~Lf-~gTIreNl~~g~~~~------~sd~ei~ 1150 (1283)
||+++|+|+++ |++|+|.++|.++...+. +.+|+.++||||+| .+| ..|+.||+.++.... .+.++..
T Consensus 303 TLlk~i~Gl~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ 382 (506)
T PRK13549 303 ELVQCLFGAYPGRWEGEIFIDGKPVKIRNPQQAIAQGIAMVPEDRKRDGIVPVMGVGKNITLAALDRFTGGSRIDDAAEL 382 (506)
T ss_pred HHHHHHhCCCCCCCCcEEEECCEECCCCCHHHHHHCCCEEeCcchhhCCCcCCCCHHHHhhhhhhhhhccCcccChHHHH
Confidence 99999999999 599999999999865443 45677899999996 355 569999997642100 1111111
Q ss_pred HHHHHhChHHHHHhCCCCccc-ccCCCCCCCChhHHHHHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHc-CC
Q 000789 1151 AATEASNAHNFISALPHGYET-NVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVM-VN 1228 (1283)
Q Consensus 1151 ~al~~a~l~~~I~~lp~Gldt-~vge~G~~LSgGQrQRlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~-~~ 1228 (1283)
..+.++++.+ |++. ........||||||||++||||++.+|+||||||||++||+.+.+.+.+.|+++. ++
T Consensus 383 -----~~~~~~l~~~--~l~~~~~~~~~~~LSgG~kqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g 455 (506)
T PRK13549 383 -----KTILESIQRL--KVKTASPELAIARLSGGNQQKAVLAKCLLLNPKILILDEPTRGIDVGAKYEIYKLINQLVQQG 455 (506)
T ss_pred -----HHHHHHHHhc--CccCCCcccccccCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHHHCC
Confidence 1123344443 2321 2334445899999999999999999999999999999999999999999998864 47
Q ss_pred ceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHHH
Q 000789 1229 RTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDALM 1265 (1283)
Q Consensus 1229 ~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl 1265 (1283)
+|||+|||+++.+.. ||++++|++|+++..|+++++.
T Consensus 456 ~tvi~~sHd~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 493 (506)
T PRK13549 456 VAIIVISSELPEVLGLSDRVLVMHEGKLKGDLINHNLT 493 (506)
T ss_pred CEEEEECCCHHHHHHhCCEEEEEECCEEEEEeccccCC
Confidence 899999999999876 9999999999999999888763
No 71
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=2.1e-73 Score=704.27 Aligned_cols=468 Identities=26% Similarity=0.453 Sum_probs=359.3
Q ss_pred cEEEEEEEEECCCC-CCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCC-----CCceEEECCcccCCCCHH
Q 000789 374 EIELRDVYFRYPAR-PEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDP-----DAGEVLIDGIDIKKLQLK 447 (1283)
Q Consensus 374 ~i~~~~v~f~y~~~-~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~~~~~~ 447 (1283)
.|+++||+++|++. ...++|+|+||++++||++||+||||||||||+++|+|+++| ++|+|.++|+++...+..
T Consensus 5 ~l~~~~l~~~~~~~~~~~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~ 84 (529)
T PRK15134 5 LLAIENLSVAFRQQQTVRTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHGESLLHASEQ 84 (529)
T ss_pred eEEEeceEEEecCCCCceeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECCEecccCCHH
Confidence 48999999999631 124699999999999999999999999999999999999987 799999999999876643
Q ss_pred H---Hh-cccEEEccCCC--CCc-ccHHHHHhcCC---CCCCHHHHHHHHHHhcHHHHHHhCCCCccc---cccCCCCCC
Q 000789 448 W---IR-EKIGLVSQEPI--LFA-TSLRENIAYGK---ENATDQEIRTAIELANAAKFIDKLPKGLDT---MAGEHGTQL 514 (1283)
Q Consensus 448 ~---~r-~~i~~v~Q~~~--l~~-~ti~~ni~~~~---~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t---~~~~~g~~L 514 (1283)
. +| ++||||+|++. +++ .|+.+|+.++. ...+.++.. ..+++.++.+ |++. .......+|
T Consensus 85 ~~~~~~~~~ig~v~Q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--gl~~~~~~~~~~~~~L 157 (529)
T PRK15134 85 TLRGVRGNKIAMIFQEPMVSLNPLHTLEKQLYEVLSLHRGMRREAAR-----GEILNCLDRV--GIRQAAKRLTDYPHQL 157 (529)
T ss_pred HHHHHhcCceEEEecCchhhcCchhhHHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHC--CCCChHHHHhhCCccc
Confidence 2 33 57999999985 444 48999987421 111222111 1122344444 5532 245667899
Q ss_pred ChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc--CCCeEEEEecCchhhhc-cCEEEEEeCCEEeE
Q 000789 515 SGGQKQRIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIM--TSRTTVVVAHRLTTIRN-ADLIAVVHQGKIVE 591 (1283)
Q Consensus 515 SgGqkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~ 591 (1283)
|||||||++|||||+.+|++||||||||+||+.+.+.+.+.|+++. .++|+|+|||+++.+.. ||+|++|++|++++
T Consensus 158 SgGe~qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~dri~~l~~G~i~~ 237 (529)
T PRK15134 158 SGGERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQQELNMGLLFITHNLSIVRKLADRVAVMQNGRCVE 237 (529)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHHHHHhcCCeEEEEcCcHHHHHHhcCEEEEEECCEEEE
Confidence 9999999999999999999999999999999999999999999875 36899999999999875 99999999999999
Q ss_pred ecChhHHhcCCCChhHHHHHHhhcCchhhhhhhccccccCchhhhhhhhhcCCCCCCccccccccccCCCCCCccccccC
Q 000789 592 KGTHDELIKDPEGPYTQLVRLQEGSKEAEDALATDADKLDSSFDILDKAMTRSGSRGESMRRSISRHSSGSRHSFGFTYG 671 (1283)
Q Consensus 592 ~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (1283)
.|++++++..+...+.
T Consensus 238 ~g~~~~~~~~~~~~~~---------------------------------------------------------------- 253 (529)
T PRK15134 238 QNRAATLFSAPTHPYT---------------------------------------------------------------- 253 (529)
T ss_pred eCCHHHHhhCCCCHHH----------------------------------------------------------------
Confidence 8887665421000000
Q ss_pred CCCCCCccccccCCCCCCCCchhhHhhhhhHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCch
Q 000789 672 VPGPINVFETEEGDQGGAERTPLMIEKRQKLSMRRLAYLNKPEFPVLLIGSIAAGIHGVIFPIFGLLLSSSIRMFFEPED 751 (1283)
Q Consensus 672 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 751 (1283)
..
T Consensus 254 ---------------------------------~~--------------------------------------------- 255 (529)
T PRK15134 254 ---------------------------------QK--------------------------------------------- 255 (529)
T ss_pred ---------------------------------HH---------------------------------------------
Confidence 00
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChhHHHHHHhhhHHHHH
Q 000789 752 KLRKDSRFWALIYLVLGIINLIAVPFQNYFFGVAGGKLIRRIRSLTFEKVVHQEISWFDDPANSSGSVGARLSTDASTIR 831 (1283)
Q Consensus 752 ~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~ff~~~~~~~G~l~~rl~~D~~~i~ 831 (1283)
+ +.. . +
T Consensus 256 -------------------------------------------------~-------~~~-~-~---------------- 261 (529)
T PRK15134 256 -------------------------------------------------L-------LNS-E-P---------------- 261 (529)
T ss_pred -------------------------------------------------H-------HHh-C-c----------------
Confidence 0 000 0 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhhHH
Q 000789 832 SLVGDSLALVVQNIATIAAGLIIAFTANWILAFVILAVSPLMLVQGYTQTKFMKGFSADAKLMYEEASQVANDAVGSIRT 911 (1283)
Q Consensus 832 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~t 911 (1283)
T Consensus 262 -------------------------------------------------------------------------------- 261 (529)
T PRK15134 262 -------------------------------------------------------------------------------- 261 (529)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhccHHHHHHHHHHHHhcHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHH
Q 000789 912 VASFCSEEKVMDLYEKKCEGPLKNGVRRGILSGAGFGFSFLVLYCTNAFCFYIGSVLVEHGKATFGQVFKVFFALTISAL 991 (1283)
Q Consensus 912 Ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~g~~~~~~~~~~~~~~~~~~~ 991 (1283)
T Consensus 262 -------------------------------------------------------------------------------- 261 (529)
T PRK15134 262 -------------------------------------------------------------------------------- 261 (529)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCcCCccCCCcccEEEEEEEEECCCC--------CCcccccceeE
Q 000789 992 GVSQTSAMAPDTTKAKDSAASIFEILDSKPKIDSSKDEGMTLSSVGGAIELRCVSFKYPTR--------PDVQIFRNLCL 1063 (1283)
Q Consensus 992 ~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~nVsf~Y~~~--------~~~~vL~~is~ 1063 (1283)
+ ..+.. .. .. ...-|+++||+++|+.. .+.++|+|+||
T Consensus 262 --------------------~------~~~~~-~~-~~------~~~~l~~~~l~~~~~~~~~~~~~~~~~~~il~~isl 307 (529)
T PRK15134 262 --------------------S------GDPVP-LP-EP------ASPLLDVEQLQVAFPIRKGILKRTVDHNVVVKNISF 307 (529)
T ss_pred --------------------c------ccccc-cC-CC------CCCcccccCcEEEeecCccccccccccceeeeccee
Confidence 0 00000 00 00 01148999999999621 12469999999
Q ss_pred EecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChH---HHhcceEEEccCC--CCCh-hhHHHHHh
Q 000789 1064 SIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLS---WLRQQMGLVSQEP--VLFN-ETIRTNIA 1137 (1283)
Q Consensus 1064 ~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~---~lR~~i~~V~Qdp--~Lf~-gTIreNl~ 1137 (1283)
+|++||++||+|+||||||||+++|+|+++ ++|+|.+||.++...+.. .+|++++||||++ .+|. .|++||+.
T Consensus 308 ~i~~Ge~~~i~G~nGsGKSTLlk~l~Gl~~-~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~l~~~~tv~e~l~ 386 (529)
T PRK15134 308 TLRPGETLGLVGESGSGKSTTGLALLRLIN-SQGEIWFDGQPLHNLNRRQLLPVRHRIQVVFQDPNSSLNPRLNVLQIIE 386 (529)
T ss_pred EEcCCCEEEEECCCCCCHHHHHHHHhCcCC-CCcEEEECCEEccccchhhHHHhhhceEEEEeCchhhcCCcccHHHHHH
Confidence 999999999999999999999999999984 899999999998776643 3578899999998 3664 69999997
Q ss_pred cCCC-C--CCC----HHHHHHHHHHhChH-HHHHhCCCCcccccCCCCCCCChhHHHHHHHHHHHccCCCEEEEecccCC
Q 000789 1138 YGKQ-G--GAT----EEEIIAATEASNAH-NFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSA 1209 (1283)
Q Consensus 1138 ~g~~-~--~~s----d~ei~~al~~a~l~-~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiARAll~~p~ILiLDEaTSa 1209 (1283)
++.. . ..+ ++++.++++..++. +. ......+||||||||++|||||+.+|+||||||||++
T Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~~LSgG~~qrv~la~al~~~p~llllDEPt~~ 455 (529)
T PRK15134 387 EGLRVHQPTLSAAQREQQVIAVMEEVGLDPET-----------RHRYPAEFSGGQRQRIAIARALILKPSLIILDEPTSS 455 (529)
T ss_pred HHHHhccccCChHHHHHHHHHHHHHcCCCHHH-----------HhcCCccCCHHHHHHHHHHHHHhCCCCEEEeeCCccc
Confidence 6411 0 111 23344555555543 22 2233458999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHcC--CceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHHHhccCc
Q 000789 1210 LDAESERVVQDALERVMV--NRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDALMKITDG 1270 (1283)
Q Consensus 1210 LD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl~~~~g 1270 (1283)
||+.+.+.+.+.|+++.+ ++|+|+|||+++.+.. ||+|++|++|+|++.|+++++++.+..
T Consensus 456 LD~~~~~~l~~~l~~~~~~~~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~~ 519 (529)
T PRK15134 456 LDKTVQAQILALLKSLQQKHQLAYLFISHDLHVVRALCHQVIVLRQGEVVEQGDCERVFAAPQQ 519 (529)
T ss_pred cCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHHhcCeEEEEECCEEEEEcCHHHHhcCCCC
Confidence 999999999999998753 7899999999999876 999999999999999999999865333
No 72
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1e-71 Score=708.09 Aligned_cols=510 Identities=24% Similarity=0.357 Sum_probs=438.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCccHHHHHHHhHHHHHHHHHHHHHHH
Q 000789 96 VAVKFLYLAAGTGIAAFLQVSCWMVTGERQATRIRGLYLKTILRQDIGFFDTETTTGEVIGRMSGDTILIQEAMGEKVGK 175 (1283)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~~~~~ll~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~ 175 (1283)
+...+.+++++..++..++.+.+...+.+.+.+++.+++++++|.|++|||.+ ++|.++||+++|++.+++.+...+..
T Consensus 860 ~~~vY~~l~~~~~~~~~~rs~~~~~~~l~aS~~Lh~~ml~~Ilrapm~FFdtT-P~GRILNRFSkD~~~vD~~Lp~~~~~ 938 (1381)
T KOG0054|consen 860 YLGVYALLGVASSLLTLLRSFLFAKGGLKASRKLHDKLLNSILRAPMSFFDTT-PTGRILNRFSKDIDTVDVLLPFTLEF 938 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhcCCC-CccchhhhcccchHHHHHhhHHHHHH
Confidence 34556666777778888888888999999999999999999999999999986 99999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHH
Q 000789 176 FIQLMSTFFGGFVVALARGWFLALVLLACLPAIVIAGGSMALIMSKMSSRGQIAYSEAGTVVEQTVSGIRTVSSFTGEKQ 255 (1283)
Q Consensus 176 ~~~~~~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~ 255 (1283)
++..++.+++.++++.+..|+..++++.+..+++.+..++.+..+...+-.....+...+++.|+++|+.|||+|+.|++
T Consensus 939 ~~~~~~~~l~~~~vi~~~~P~fli~~~pl~v~~~~~~~~Y~~tsReLkRLesitRSPi~sh~~Etl~GlsTIRAf~~~~r 1018 (1381)
T KOG0054|consen 939 FLQSLLNVLGILVVISYVTPWFLIAIIPLGVIYYFVQRYYLATSRELKRLESITRSPIYSHFSETLQGLSTIRAFGKEER 1018 (1381)
T ss_pred HHHHHHHHHHHHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhhhcccchHHHhHHHHhcCcceeeeccccHH
Confidence 99999999999999999999888877777777777777777777777777777788889999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 256 AIEKYNNKLQVAYRAAVQQGMVSGIGLGVLMLTVIGTYGLAVWYGSKLIIEKGYNGGTVINVIMAIMTGGMSLGQTSPCL 335 (1283)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~t~g~~~~~~~~~~~~~~~l~~~~~~~ 335 (1283)
+.+++....+...+...-......+...-+.++..+....+..+.. +...+..++|.+--.+.|.+.....+..+....
T Consensus 1019 f~~~~~~~~D~~~~~~f~~~~a~RWla~Rle~ig~~~v~~~al~~v-l~~~~~~~~g~vGLslsyal~lt~~l~~~vR~~ 1097 (1381)
T KOG0054|consen 1019 FIQENDELIDENSRAFFLSISANRWLAVRLELLGNLVVLIAALFAV-LLPSGLISPGLVGLSLSYALQLTGLLQWLVRQS 1097 (1381)
T ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HccCCCCCcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999888877765544333333333333333322222221111 111222567777777788888777777777778
Q ss_pred HHHHHHHHHHHHHHHHHccCCCCCCCCC-C--CCcccCccccEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCC
Q 000789 336 NAFAGGQAAAYKMFETIKRKPKIDPYDT-S--GITLEKIEGEIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQS 412 (1283)
Q Consensus 336 ~~~~~~~~a~~ri~~~l~~~~~~~~~~~-~--~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~s 412 (1283)
..+.....|.+|+.++.+.++| .+... . .++.++.+|+|+|+|++.+|.+. ..+||+||||+|+|||++||||++
T Consensus 1098 ~elEn~m~SVERv~eY~~~~~E-~p~~~~~~~pp~~WP~~G~I~f~~~~~RYrp~-lp~VLk~is~~I~p~eKVGIVGRT 1175 (1381)
T KOG0054|consen 1098 SELENNMVSVERVLEYTDIPSE-APLEIEESRPPPSWPSKGEIEFEDLSLRYRPN-LPLVLKGISFTIKPGEKVGIVGRT 1175 (1381)
T ss_pred HHHHhcchhhhHHHHHhcCCCC-CCCCCcCCCCCCCCCCCCeEEEEEeEEEeCCC-CcchhcCceEEEcCCceEEEeCCC
Confidence 8888889999999999996665 22111 1 23345678999999999999654 357999999999999999999999
Q ss_pred CCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHHhcccEEEccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcH
Q 000789 413 GSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWIREKIGLVSQEPILFATSLRENIAYGKENATDQEIRTAIELANA 492 (1283)
Q Consensus 413 GsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~ 492 (1283)
|||||||+++|.|+.+|.+|+|.|||+||.++..+.||++++++||||.||+||+|.|+.-. ...+|+++|+|++.|++
T Consensus 1176 GaGKSSL~~aLFRl~e~~~G~I~IDgvdI~~igL~dLRsrlsIIPQdPvLFsGTvR~NLDPf-~e~sD~~IW~ALe~~~L 1254 (1381)
T KOG0054|consen 1176 GAGKSSLILALFRLVEPAEGEILIDGVDISKIGLHDLRSRLSIIPQDPVLFSGTVRFNLDPF-DEYSDDEIWEALERCQL 1254 (1381)
T ss_pred CCCHHHHHHHHHHhcCccCCeEEEcCeecccccHHHHHhcCeeeCCCCceecCccccccCcc-cccCHHHHHHHHHHhCh
Confidence 99999999999999999999999999999999999999999999999999999999999854 35789999999999999
Q ss_pred HHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCc
Q 000789 493 AKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMTSRTTVVVAHRL 572 (1283)
Q Consensus 493 ~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l 572 (1283)
.++++++|.|+|+.+.|+|.|+|-||||.+||||||+++++||+|||||+++|++|...||+.|++..+++|||.|+||+
T Consensus 1255 k~~v~~~p~~Ld~~v~egG~N~SvGQRQLlCLARALLr~skILvLDEATAsVD~~TD~lIQ~tIR~~F~dcTVltIAHRl 1334 (1381)
T KOG0054|consen 1255 KDVVSSLPGGLDSEVSEGGENFSVGQRQLLCLARALLRKSKILVLDEATASVDPETDALIQKTIREEFKDCTVLTIAHRL 1334 (1381)
T ss_pred HHHHhhCCcCCCceecCCCccCChHHHHHHHHHHHHhccCCEEEEecccccCChHHHHHHHHHHHHHhcCCeEEEEeecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhccCEEEEEeCCEEeEecChhHHhcCCCChhHHHH
Q 000789 573 TTIRNADLIAVVHQGKIVEKGTHDELIKDPEGPYTQLV 610 (1283)
Q Consensus 573 ~~~~~~d~i~vl~~G~i~~~g~~~~l~~~~~~~~~~~~ 610 (1283)
+++.++|||+|||+|+|+|.|+|.+|++++++.|+++.
T Consensus 1335 ~TVmd~DrVlVld~G~v~EfdsP~~Ll~~~~S~f~~~l 1372 (1381)
T KOG0054|consen 1335 NTVMDSDRVLVLDAGRVVEFDSPAELLSDKDSLFSSLL 1372 (1381)
T ss_pred chhhhcCeEEEeeCCeEeecCChHHHHhCCcchHHHHH
Confidence 99999999999999999999999999998778876544
No 73
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]
Probab=100.00 E-value=8.1e-73 Score=614.45 Aligned_cols=471 Identities=31% Similarity=0.482 Sum_probs=368.8
Q ss_pred cEEEEEEEEECCC-CCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCC-----CCceEEECCcccCCCCHH
Q 000789 374 EIELRDVYFRYPA-RPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDP-----DAGEVLIDGIDIKKLQLK 447 (1283)
Q Consensus 374 ~i~~~~v~f~y~~-~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~~~~~~ 447 (1283)
-++++|++..|.. .....++++|||+|++||++||||+||||||-..+.++|+++- -+|+|.++|.|+-..+..
T Consensus 6 lL~v~nLsV~f~~~~~~~~aVk~isf~i~~GEtlAlVGESGSGKSvTa~sim~LLp~~~~~~~sg~i~f~G~dll~~se~ 85 (534)
T COG4172 6 LLSIRNLSVAFHQEGGTVEAVKGISFDIEAGETLALVGESGSGKSVTALSILGLLPSPAAAHPSGSILFDGEDLLAASER 85 (534)
T ss_pred ceeeeccEEEEecCCcceEeeccceeeecCCCEEEEEecCCCCccHHHHHHHHhcCCCcccCccceeEEcChhhhcCCHH
Confidence 4788999988752 2345799999999999999999999999999999999999864 379999999999888887
Q ss_pred HHhc----ccEEEccCCC--CCc-ccH----HHHHhcCCC---CCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCC
Q 000789 448 WIRE----KIGLVSQEPI--LFA-TSL----RENIAYGKE---NATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQ 513 (1283)
Q Consensus 448 ~~r~----~i~~v~Q~~~--l~~-~ti----~~ni~~~~~---~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~ 513 (1283)
.+|. +|+++||||. |-+ -|| .|-|.+-.. .+..+++.+.++.+++.+- .-.+...+.+
T Consensus 86 ~lr~iRG~~I~MIFQEPMtSLNPl~tIg~Qi~E~l~~Hrg~~~~~Ar~r~lelL~~VgI~~p--------~~rl~~yPHe 157 (534)
T COG4172 86 QLRGVRGNKIGMIFQEPMTSLNPLHTIGKQLAEVLRLHRGLSRAAARARALELLELVGIPEP--------EKRLDAYPHE 157 (534)
T ss_pred HHhhhcccceEEEecccccccCcHhHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHcCCCch--------hhhhhhCCcc
Confidence 7764 7999999995 222 144 444444221 1123344455555544221 1234556679
Q ss_pred CChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhc-cCEEEEEeCCEEe
Q 000789 514 LSGGQKQRIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMT--SRTTVVVAHRLTTIRN-ADLIAVVHQGKIV 590 (1283)
Q Consensus 514 LSgGqkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~ 590 (1283)
|||||||||.||.||+.+|++||-||||.|||.....+|.+.|+++.+ +..+++|||+|..+++ ||||+||.+|+|+
T Consensus 158 LSGGqRQRVMIAMALan~P~lLIADEPTTALDVtvQaQIL~Ll~~Lq~~~gMa~lfITHDL~iVr~~ADrV~VM~~G~iv 237 (534)
T COG4172 158 LSGGQRQRVMIAMALANEPDLLIADEPTTALDVTVQAQILDLLKELQAELGMAILFITHDLGIVRKFADRVYVMQHGEIV 237 (534)
T ss_pred cCcchhhHHHHHHHHcCCCCeEeecCCcchhhhhhHHHHHHHHHHHHHHhCcEEEEEeccHHHHHHhhhhEEEEeccEEe
Confidence 999999999999999999999999999999999999999999999864 6799999999999987 9999999999999
Q ss_pred EecChhHHhcCCCChhHHHHHHhhcCchhhhhhhccccccCchhhhhhhhhcCCCCCCccccccccccCCCCCCcccccc
Q 000789 591 EKGTHDELIKDPEGPYTQLVRLQEGSKEAEDALATDADKLDSSFDILDKAMTRSGSRGESMRRSISRHSSGSRHSFGFTY 670 (1283)
Q Consensus 591 ~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (1283)
|.|+.+++++.|...|.+..-..+. .....
T Consensus 238 E~~~t~~lF~~PqHpYTr~Ll~aeP----------------------------~g~~~---------------------- 267 (534)
T COG4172 238 ETGTTETLFAAPQHPYTRKLLAAEP----------------------------SGDPP---------------------- 267 (534)
T ss_pred ecCcHHHHhhCCCChHHHHHHhcCC----------------------------CCCCC----------------------
Confidence 9999999999887777764421100 00000
Q ss_pred CCCCCCCccccccCCCCCCCCchhhHhhhhhHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Q 000789 671 GVPGPINVFETEEGDQGGAERTPLMIEKRQKLSMRRLAYLNKPEFPVLLIGSIAAGIHGVIFPIFGLLLSSSIRMFFEPE 750 (1283)
Q Consensus 671 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 750 (1283)
+.+ +.
T Consensus 268 --p~~-------~~------------------------------------------------------------------ 272 (534)
T COG4172 268 --PLP-------ED------------------------------------------------------------------ 272 (534)
T ss_pred --CCC-------CC------------------------------------------------------------------
Confidence 000 00
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChhHHHHHHhhhHHHH
Q 000789 751 DKLRKDSRFWALIYLVLGIINLIAVPFQNYFFGVAGGKLIRRIRSLTFEKVVHQEISWFDDPANSSGSVGARLSTDASTI 830 (1283)
Q Consensus 751 ~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~ff~~~~~~~G~l~~rl~~D~~~i 830 (1283)
T Consensus 273 -------------------------------------------------------------------------------- 272 (534)
T COG4172 273 -------------------------------------------------------------------------------- 272 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhhH
Q 000789 831 RSLVGDSLALVVQNIATIAAGLIIAFTANWILAFVILAVSPLMLVQGYTQTKFMKGFSADAKLMYEEASQVANDAVGSIR 910 (1283)
Q Consensus 831 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~ 910 (1283)
T Consensus 273 -------------------------------------------------------------------------------- 272 (534)
T COG4172 273 -------------------------------------------------------------------------------- 272 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHhccHHHHHHHHHHHHhcHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHH
Q 000789 911 TVASFCSEEKVMDLYEKKCEGPLKNGVRRGILSGAGFGFSFLVLYCTNAFCFYIGSVLVEHGKATFGQVFKVFFALTISA 990 (1283)
Q Consensus 911 tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~g~~~~~~~~~~~~~~~~~~ 990 (1283)
T Consensus 273 -------------------------------------------------------------------------------- 272 (534)
T COG4172 273 -------------------------------------------------------------------------------- 272 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCcCCccCCCcccEEEEEEEEECCCC--------CCccccccee
Q 000789 991 LGVSQTSAMAPDTTKAKDSAASIFEILDSKPKIDSSKDEGMTLSSVGGAIELRCVSFKYPTR--------PDVQIFRNLC 1062 (1283)
Q Consensus 991 ~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~nVsf~Y~~~--------~~~~vL~~is 1062 (1283)
...-++.+||...||-+ ....+.++||
T Consensus 273 ---------------------------------------------~~~ll~~~~v~v~f~i~~g~~~r~~~~~~AVd~is 307 (534)
T COG4172 273 ---------------------------------------------APVLLEVEDLRVWFPIKGGFLRRTVDHLRAVDGIS 307 (534)
T ss_pred ---------------------------------------------CCceEEecceEEEEecCCccccccchheEEeccce
Confidence 00012222222222110 0124789999
Q ss_pred EEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHH---HhcceEEEccCCC--C-ChhhHHHHH
Q 000789 1063 LSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSW---LRQQMGLVSQEPV--L-FNETIRTNI 1136 (1283)
Q Consensus 1063 ~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~---lR~~i~~V~Qdp~--L-f~gTIreNl 1136 (1283)
|+.++||++||||.|||||||+-.+|+|+.+++ |+|.++|.++...+.+. +|+++-+|+|||+ | -..||.+-|
T Consensus 308 l~L~~gqTlGlVGESGSGKsTlG~allrL~~s~-G~I~F~G~~i~~~~~~~mrplR~~mQvVFQDPygSLsPRmtV~qII 386 (534)
T COG4172 308 LTLRRGQTLGLVGESGSGKSTLGLALLRLIPSQ-GEIRFDGQDIDGLSRKEMRPLRRRMQVVFQDPYGSLSPRMTVGQII 386 (534)
T ss_pred eEecCCCeEEEEecCCCCcchHHHHHHhhcCcC-ceEEECCccccccChhhhhhhhhhceEEEeCCCCCCCcccCHHHHh
Confidence 999999999999999999999999999999876 99999999999888665 6799999999996 2 245776666
Q ss_pred hcCC---CCCC----CHHHHHHHHHHhChHHHHH-hCCCCcccccCCCCCCCChhHHHHHHHHHHHccCCCEEEEecccC
Q 000789 1137 AYGK---QGGA----TEEEIIAATEASNAHNFIS-ALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATS 1208 (1283)
Q Consensus 1137 ~~g~---~~~~----sd~ei~~al~~a~l~~~I~-~lp~Gldt~vge~G~~LSgGQrQRlaiARAll~~p~ILiLDEaTS 1208 (1283)
.=|. .+.. .++.+.+|++.+|++.-.. +.| ..+|||||||||||||++-+|++++||||||
T Consensus 387 ~EGL~vh~~~ls~~eR~~rv~~aL~EVGLDp~~r~RYP-----------hEFSGGQRQRIAIARAliLkP~~i~LDEPTS 455 (534)
T COG4172 387 EEGLRVHEPKLSAAERDQRVIEALEEVGLDPATRNRYP-----------HEFSGGQRQRIAIARALILKPELILLDEPTS 455 (534)
T ss_pred hhhhhhcCCCCCHHHHHHHHHHHHHHcCCChhHhhcCC-----------cccCcchhhHHHHHHHHhcCCcEEEecCCch
Confidence 4331 1123 3566888999998875432 233 4799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHc--CCceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHHHhccCchhHH
Q 000789 1209 ALDAESERVVQDALERVM--VNRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDALMKITDGAYAS 1274 (1283)
Q Consensus 1209 aLD~~te~~I~~~L~~~~--~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl~~~~g~y~~ 1274 (1283)
+||-.-...|.+.|+++- .+-+-++|+|+|..++. ||+|+||.+|+|||+|..+++++++...|.+
T Consensus 456 ALD~SVQaQvv~LLr~LQ~k~~LsYLFISHDL~VvrAl~~~viVm~~GkiVE~G~~~~if~~P~~~YT~ 524 (534)
T COG4172 456 ALDRSVQAQVLDLLRDLQQKHGLSYLFISHDLAVVRALCHRVIVMRDGKIVEQGPTEAVFANPQHEYTR 524 (534)
T ss_pred HhhHHHHHHHHHHHHHHHHHhCCeEEEEeccHHHHHHhhceEEEEeCCEEeeeCCHHHHhcCCCcHHHH
Confidence 999999999999998874 36799999999999998 9999999999999999999999998888865
No 74
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7e-73 Score=697.17 Aligned_cols=460 Identities=22% Similarity=0.358 Sum_probs=354.3
Q ss_pred cEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHH-Hhcc
Q 000789 374 EIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKW-IREK 452 (1283)
Q Consensus 374 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~-~r~~ 452 (1283)
.|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... .+++
T Consensus 5 ~l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~ 81 (510)
T PRK09700 5 YISMAGIGKSFGP---VHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPTKGTITINNINYNKLDHKLAAQLG 81 (510)
T ss_pred eEEEeeeEEEcCC---eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCCccEEEECCEECCCCCHHHHHHCC
Confidence 4899999999963 36999999999999999999999999999999999999999999999999998777554 3467
Q ss_pred cEEEccCCCCCcc-cHHHHHhcCCCCC---------CHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHH
Q 000789 453 IGLVSQEPILFAT-SLRENIAYGKENA---------TDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRI 522 (1283)
Q Consensus 453 i~~v~Q~~~l~~~-ti~~ni~~~~~~~---------~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri 522 (1283)
++||+|++.++.. |++||+.++.... +.++.. ..+.+.++.+ |++........+||||||||+
T Consensus 82 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--gl~~~~~~~~~~LSgG~~qrv 154 (510)
T PRK09700 82 IGIIYQELSVIDELTVLENLYIGRHLTKKVCGVNIIDWREMR-----VRAAMMLLRV--GLKVDLDEKVANLSISHKQML 154 (510)
T ss_pred eEEEeecccccCCCcHHHHhhhccccccccccccccCHHHHH-----HHHHHHHHHc--CCCCCcccchhhCCHHHHHHH
Confidence 9999999988875 9999998764210 111111 1233455555 666566777789999999999
Q ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC-CCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHHhc
Q 000789 523 AIARAILKNPKILLLDEATSALDAESERIVQDALVKIMT-SRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDELIK 600 (1283)
Q Consensus 523 aiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~-~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~ 600 (1283)
+|||||+.+|++|||||||++||+.+...+.+.|+++.+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 155 ~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsHd~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 234 (510)
T PRK09700 155 EIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLAEIRRICDRYTVMKDGSSVCSGMVSDVSN 234 (510)
T ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEeeecchhhCCH
Confidence 999999999999999999999999999999999998754 6899999999999876 99999999999998876554321
Q ss_pred CCCChhHHHHHHhhcCchhhhhhhccccccCchhhhhhhhhcCCCCCCccccccccccCCCCCCccccccCCCCCCCccc
Q 000789 601 DPEGPYTQLVRLQEGSKEAEDALATDADKLDSSFDILDKAMTRSGSRGESMRRSISRHSSGSRHSFGFTYGVPGPINVFE 680 (1283)
Q Consensus 601 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (1283)
. ++.. .
T Consensus 235 ~------~~~~---------~----------------------------------------------------------- 240 (510)
T PRK09700 235 D------DIVR---------L----------------------------------------------------------- 240 (510)
T ss_pred H------HHHH---------H-----------------------------------------------------------
Confidence 0 0000 0
Q ss_pred cccCCCCCCCCchhhHhhhhhHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhhhhHHH
Q 000789 681 TEEGDQGGAERTPLMIEKRQKLSMRRLAYLNKPEFPVLLIGSIAAGIHGVIFPIFGLLLSSSIRMFFEPEDKLRKDSRFW 760 (1283)
Q Consensus 681 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 760 (1283)
T Consensus 241 -------------------------------------------------------------------------------- 240 (510)
T PRK09700 241 -------------------------------------------------------------------------------- 240 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChhHHHHHHhhhHHHHHHHHHHHHHH
Q 000789 761 ALIYLVLGIINLIAVPFQNYFFGVAGGKLIRRIRSLTFEKVVHQEISWFDDPANSSGSVGARLSTDASTIRSLVGDSLAL 840 (1283)
Q Consensus 761 ~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~ff~~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~ 840 (1283)
+ +.....
T Consensus 241 ----------------------------------------~-------~~~~~~-------------------------- 247 (510)
T PRK09700 241 ----------------------------------------M-------VGRELQ-------------------------- 247 (510)
T ss_pred ----------------------------------------h-------cCCCcc--------------------------
Confidence 0 000000
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHH
Q 000789 841 VVQNIATIAAGLIIAFTANWILAFVILAVSPLMLVQGYTQTKFMKGFSADAKLMYEEASQVANDAVGSIRTVASFCSEEK 920 (1283)
Q Consensus 841 ~~~~~~~~~~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~ 920 (1283)
T Consensus 248 -------------------------------------------------------------------------------- 247 (510)
T PRK09700 248 -------------------------------------------------------------------------------- 247 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHhcHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 921 VMDLYEKKCEGPLKNGVRRGILSGAGFGFSFLVLYCTNAFCFYIGSVLVEHGKATFGQVFKVFFALTISALGVSQTSAMA 1000 (1283)
Q Consensus 921 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1000 (1283)
.
T Consensus 248 -------------~------------------------------------------------------------------ 248 (510)
T PRK09700 248 -------------N------------------------------------------------------------------ 248 (510)
T ss_pred -------------c------------------------------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCCCCCCcCCccCCCcccEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCC
Q 000789 1001 PDTTKAKDSAASIFEILDSKPKIDSSKDEGMTLSSVGGAIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSG 1080 (1283)
Q Consensus 1001 ~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSG 1080 (1283)
+ .....+... .. . ....|+++|+++.|. .+|+|+||+|++||++||+||||||
T Consensus 249 -----------~---~~~~~~~~~--~~-----~-~~~~l~~~~l~~~~~-----~~l~~isl~i~~Ge~~~l~G~NGsG 301 (510)
T PRK09700 249 -----------R---FNAMKENVS--NL-----A-HETVFEVRNVTSRDR-----KKVRDISFSVCRGEILGFAGLVGSG 301 (510)
T ss_pred -----------c---ccccccccc--cC-----C-CCcEEEEeCccccCC-----CcccceeEEEcCCcEEEEECCCCCC
Confidence 0 000000000 00 0 011499999999763 2899999999999999999999999
Q ss_pred HHHHHHHHhccCCCCcceEEECCccCCCCCh-HHHhcceEEEccCC---CCCh-hhHHHHHhcCCCC---------C-CC
Q 000789 1081 KSTVIALIERFYDPDSGHVLLDNIELPKFKL-SWLRQQMGLVSQEP---VLFN-ETIRTNIAYGKQG---------G-AT 1145 (1283)
Q Consensus 1081 KSTL~~lL~rl~~~~~G~I~idG~di~~~~~-~~lR~~i~~V~Qdp---~Lf~-gTIreNl~~g~~~---------~-~s 1145 (1283)
||||+++|+|+++|++|+|.++|.++...+. ..+|+.++||||++ .+|. .|++||+.++... . .+
T Consensus 302 KSTLlk~i~Gl~~p~~G~I~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~ 381 (510)
T PRK09700 302 RTELMNCLFGVDKRAGGEIRLNGKDISPRSPLDAVKKGMAYITESRRDNGFFPNFSIAQNMAISRSLKDGGYKGAMGLFH 381 (510)
T ss_pred HHHHHHHHhCCCcCCCCeEEECCEECCCCCHHHHHHCCcEEccCccccCCCcCCCcHHHHhccccccccccccccccccC
Confidence 9999999999999999999999999866543 45678999999984 4664 5999999865210 0 01
Q ss_pred HHHHHHHHHHhChHHHHHhCCCCcc-cccCCCCCCCChhHHHHHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHH
Q 000789 1146 EEEIIAATEASNAHNFISALPHGYE-TNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALER 1224 (1283)
Q Consensus 1146 d~ei~~al~~a~l~~~I~~lp~Gld-t~vge~G~~LSgGQrQRlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~ 1224 (1283)
..+. ...+.+.++.+ |+. .........||||||||++|||||+++|+|||||||||+||+.+.+.+.+.|++
T Consensus 382 ~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~~LSgGq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~ 454 (510)
T PRK09700 382 EVDE-----QRTAENQRELL--ALKCHSVNQNITELSGGNQQKVLISKWLCCCPEVIIFDEPTRGIDVGAKAEIYKVMRQ 454 (510)
T ss_pred hHHH-----HHHHHHHHHhc--CCCCCCccCccccCChHHHHHHHHHHHHhcCCCEEEECCCCCCcCHHHHHHHHHHHHH
Confidence 1110 01122333333 222 122333457999999999999999999999999999999999999999999988
Q ss_pred Hc-CCceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHH
Q 000789 1225 VM-VNRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDA 1263 (1283)
Q Consensus 1225 ~~-~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~e 1263 (1283)
+. +++|+|+|||+++.+.. ||+|++|++|++++.+++.+
T Consensus 455 l~~~g~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~~~~~ 495 (510)
T PRK09700 455 LADDGKVILMVSSELPEIITVCDRIAVFCEGRLTQILTNRD 495 (510)
T ss_pred HHHCCCEEEEEcCCHHHHHhhCCEEEEEECCEEEEEecCcc
Confidence 64 47899999999998865 99999999999999887633
No 75
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=1.6e-70 Score=739.78 Aligned_cols=500 Identities=18% Similarity=0.260 Sum_probs=413.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCccHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 106 GTGIAAFLQVSCWMVTGERQATRIRGLYLKTILRQDIGFFDTETTTGEVIGRMSGDTILIQEAMGEKVGKFIQLMSTFFG 185 (1283)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~lR~~~~~~ll~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~i~ 185 (1283)
+..++.+++.+++.+.+.+...++|.++++++++.|+.||++. ++|++++|+++|++.+++.+...+..++..++.+++
T Consensus 937 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~~-~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~i~ 1015 (1490)
T TIGR01271 937 SVLALGFFRGLPLVHTLLTVSKRLHEQMLHSVLQAPMAVLNTM-KAGRILNRFTKDMAIIDDMLPLTLFDFIQLTLIVLG 1015 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCC-ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445666777788888999999999999999999999999986 999999999999999999999999999999999999
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHH
Q 000789 186 GFVVALARGWFLALVLLACLPAIVIAGGSMALIMSKMSSRGQIAYSEAGTVVEQTVSGIRTVSSFTGEKQAIEKYNNKLQ 265 (1283)
Q Consensus 186 ~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~ 265 (1283)
.++++++++|.++++++.++.+++++..++.+..++..+......+.+.+.+.|+++|+.+||+|++++.+.+++.+..+
T Consensus 1016 ~l~~i~~~~p~l~l~~~~l~~~~~~~~~~~~~~~r~l~~~~~~~~s~l~~~~~Etl~Gl~tIraf~~~~~~~~~~~~~~~ 1095 (1490)
T TIGR01271 1016 AIFVVSVLQPYIFIAAIPVAVIFIMLRAYFLRTSQQLKQLESEARSPIFSHLITSLKGLWTIRAFGRQSYFETLFHKALN 1095 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCHHHHHHhCCcHHHHHHHHHHHH
Confidence 99999999998766544444444444555555556666666777788999999999999999999999999999998887
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 266 VAYRAAVQQGMVSGIGLGVLMLTVIGTY--GLAVWYGSKLIIEKGYNGGTVINVIMAIMTGGMSLGQTSPCLNAFAGGQA 343 (1283)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~v~~~~~t~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 343 (1283)
...+..........+......++..+.. +++++++.. ..+.|.+..++.+.+....++..+...+..+..+..
T Consensus 1096 ~~~~~~~~~~~~~~wl~~~~~~i~~~~~~~~~~l~~~~~-----~~~~g~~g~~l~~~~~l~~~l~~l~~~~~~le~~~~ 1170 (1490)
T TIGR01271 1096 LHTANWFLYLSTLRWFQMRIDIIFVFFFIAVTFIAIGTN-----QDGEGEVGIILTLAMNILSTLQWAVNSSIDVDGLMR 1170 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6554443333333333222222221111 112222322 234444444455555666677777777888899999
Q ss_pred HHHHHHHHHccCCCCCCCCCC--------------C--CcccCccccEEEEEEEEECCCCCCCcccccceEEEeCCCEEE
Q 000789 344 AAYKMFETIKRKPKIDPYDTS--------------G--ITLEKIEGEIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAA 407 (1283)
Q Consensus 344 a~~ri~~~l~~~~~~~~~~~~--------------~--~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ 407 (1283)
|.+|+.++++.+++.+..... . ++..+..|.|+|+||+|+|++. .+++|+|+||+|+|||++|
T Consensus 1171 s~eRi~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~-~~~vL~~is~~I~~Gekva 1249 (1490)
T TIGR01271 1171 SVSRVFKFIDLPQEEPRPSGGGGKYQLSTVLVIENPHAQKCWPSGGQMDVQGLTAKYTEA-GRAVLQDLSFSVEGGQRVG 1249 (1490)
T ss_pred HHHHHHHHhcCCCccccccccccccccccccccccCCCCCCCCCCCeEEEEEEEEEeCCC-CcceeeccEEEEcCCCEEE
Confidence 999999999766553211000 0 0112345789999999999753 3579999999999999999
Q ss_pred EEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHHhcccEEEccCCCCCcccHHHHHhcCCCCCCHHHHHHHH
Q 000789 408 LVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWIREKIGLVSQEPILFATSLRENIAYGKENATDQEIRTAI 487 (1283)
Q Consensus 408 ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~ 487 (1283)
|||+||||||||+++|+|+++ ++|+|+|||+|+++++.+.+|++|+||||||+||+||||+||.... ..+++++++|+
T Consensus 1250 IvGrSGsGKSTLl~lL~rl~~-~~G~I~IdG~di~~i~~~~lR~~is~IpQdp~LF~GTIR~NLdp~~-~~tdeei~~aL 1327 (1490)
T TIGR01271 1250 LLGRTGSGKSTLLSALLRLLS-TEGEIQIDGVSWNSVTLQTWRKAFGVIPQKVFIFSGTFRKNLDPYE-QWSDEEIWKVA 1327 (1490)
T ss_pred EECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEcccCCHHHHHhceEEEeCCCccCccCHHHHhCccc-CCCHHHHHHHH
Confidence 999999999999999999997 7999999999999999999999999999999999999999998654 57899999999
Q ss_pred HHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEE
Q 000789 488 ELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMTSRTTVV 567 (1283)
Q Consensus 488 ~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~ 567 (1283)
+.+++++++.++|+|+||.+||+|.+||||||||+||||||+++|+|||||||||+||++|++.|++.|++..+++|+|+
T Consensus 1328 ~~~~L~~~i~~lp~GLdt~v~e~G~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~~~~~~~TvI~ 1407 (1490)
T TIGR01271 1328 EEVGLKSVIEQFPDKLDFVLVDGGYVLSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRKTLKQSFSNCTVIL 1407 (1490)
T ss_pred HHCCCHHHHHhCccccccccccCCCcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999988999999
Q ss_pred EecCchhhhccCEEEEEeCCEEeEecChhHHhcCCCChhHHHHHHhhc
Q 000789 568 VAHRLTTIRNADLIAVVHQGKIVEKGTHDELIKDPEGPYTQLVRLQEG 615 (1283)
Q Consensus 568 itH~l~~~~~~d~i~vl~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~ 615 (1283)
||||++++.+||+|+||++|+|+|.|+|++|+++ ++.|+++++.+..
T Consensus 1408 IaHRl~ti~~~DrIlvL~~G~ivE~g~p~~Ll~~-~~~f~~l~~~~~~ 1454 (1490)
T TIGR01271 1408 SEHRVEALLECQQFLVIEGSSVKQYDSIQKLLNE-TSLFKQAMSAADR 1454 (1490)
T ss_pred EecCHHHHHhCCEEEEEECCEEEEeCCHHHHHcC-CcHHHHHHHHhCh
Confidence 9999999999999999999999999999999975 8899999875543
No 76
>TIGR01194 cyc_pep_trnsptr cyclic peptide transporter. This model describes cyclic peptide transporter in bacteria. Bacteria have elaborate pathways for the production of toxins and secondary metabolites. Many such compounds, including syringomycin and pyoverdine are synthesized on non-ribosomal templates consisting of a multienzyme complex. On several occasions the proteins of the complex and transporter protein are present on the same operon. Often times these compounds cross the biological membrane by specific transporters. Syringomycin is an amphipathic, cylclic lipodepsipeptide when inserted into host causes formation of channels, permeable to variety of cations. On the other hand, pyoverdine is a cyclic octa-peptidyl dihydroxyquinoline, which is efficient in sequestering iron for uptake.
Probab=100.00 E-value=3.1e-70 Score=678.43 Aligned_cols=534 Identities=15% Similarity=0.134 Sum_probs=430.9
Q ss_pred HHHHHHHhhc-ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 703 SMRRLAYLNK-PEFPVLLIGSIAAGIHGVIFPIFGLLLSSSIRMFFEPEDKLRKDSRFWALIYLVLGIINLIAVPFQNYF 781 (1283)
Q Consensus 703 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~ 781 (1283)
.+++++.+.+ +.++.+.++++++.+.++......+++...+.... .... .....++++.++..++.++..++
T Consensus 4 ~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~~-----~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 76 (555)
T TIGR01194 4 AIGEILALLRSPFPAITAFSIALGLAGGLAIIALLASINNAIHEEN-----FLGQ--GSLFSFGGLCLLALLFRIGADIF 76 (555)
T ss_pred hHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-----cccc--hHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456666667 77777777777776666655555555444432110 0000 01122444555666788888999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Q 000789 782 FGVAGGKLIRRIRSLTFEKVVHQEISWFDDPANSSGSVGARLSTDASTIRSLVGDSLALVVQNIATIAAGLIIAFTANWI 861 (1283)
Q Consensus 782 ~~~~~~~~~~~lr~~~~~~ll~~~~~ff~~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 861 (1283)
....+.++..++|.++|+++++.|+.||++ +++|++++|+++|++.++.++.. +..++..++.+++.++++++.+|.
T Consensus 77 ~~~~~~~~~~~lR~~l~~~l~~~~~~~~~~--~~~G~l~srl~~Dv~~i~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~ 153 (555)
T TIGR01194 77 PAYAGMHIIANLRIALCEKILGAPIEEIDR--RGAHNLIPLLTHDIDQINAFLFI-FPPIAIALAIFFFCIAYLAYLSVP 153 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCHHHHHh--cCcchhhHHHhhhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhHH
Confidence 999999999999999999999999999995 78999999999999999998864 677778888888888899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHH--HHHHHHHHHHhcHHHhHHHH
Q 000789 862 LAFVILAVSPLMLVQGYTQTKFMKGFSADAKLMYEEASQVANDAVGSIRTVASFCSEE--KVMDLYEKKCEGPLKNGVRR 939 (1283)
Q Consensus 862 l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~--~~~~~~~~~~~~~~~~~~~~ 939 (1283)
+++++++.+|+.++...+..+..++...+.++..++..+.+.|.+.|++++|+|+.++ ...++|.+..++..+...+.
T Consensus 154 L~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (555)
T TIGR01194 154 MFAITISAIIIGTAAQLLAFMGGFKFFHAARDEEDAFNEHTHAIAFGAKELKIHGIRRLSFAHGAIQESANNIADLHIIE 233 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhHHHHHhcCHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 9999988888877777666666666667777788888999999999999999999954 55677888777777666555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 000789 940 GILSGAGFGFSFLVLYCTNAFCFYIGSVLVEHGKATFGQVFKVFFALTISALGVSQTSAMAPDTTKAKDSAASIFEILDS 1019 (1283)
Q Consensus 940 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~ 1019 (1283)
.........+...+..+...+.++++.+. |.+++|.++++..+......|+..+......+..+..+.+|+.++++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~t~g~l~a~~~~~~~l~~pi~~l~~~~~~~~~a~~s~~ri~~ll~~ 310 (555)
T TIGR01194 234 ILIFIAAENFGQLLFFLLIGCALFAAAMF---ASIDAAAISAFVLALLYIKGPLEMLVSALPILAQAQIACQRLADFGER 310 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 44443333333333333334444444433 789999999999999999999999999999999999999999999753
Q ss_pred CCC--CCC--CCCcCC---ccCCCcccEEEEEEEEECCCCC--CcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhc
Q 000789 1020 KPK--IDS--SKDEGM---TLSSVGGAIELRCVSFKYPTRP--DVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIER 1090 (1283)
Q Consensus 1020 ~~~--~~~--~~~~~~---~~~~~~g~I~~~nVsf~Y~~~~--~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r 1090 (1283)
+.+ ... ...... +++...+.|+|+||+|+|++.+ ..++|+|+||+|++||++|||||||||||||+++|+|
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~~~l~~vs~~i~~G~~~aivG~sGsGKSTl~~ll~g 390 (555)
T TIGR01194 311 FNEPEPELELSDADNVLLLAHDKSVDSIELKDVHMNPKAPEGSEGFALGPIDLRIAQGDIVFIVGENGCGKSTLAKLFCG 390 (555)
T ss_pred hccccccccccccccccccccCCCCceEEEEEEEEEeCCCCCCcCceeccceEEEcCCcEEEEECCCCCCHHHHHHHHhC
Confidence 211 110 000000 1112246799999999998532 2369999999999999999999999999999999999
Q ss_pred cCCCCcceEEECCccCCCCChHHHhcceEEEccCCCCChhhHHHHHhcCCCCCCCHHHHHHHHHHhChHHHHHhCCCCcc
Q 000789 1091 FYDPDSGHVLLDNIELPKFKLSWLRQQMGLVSQEPVLFNETIRTNIAYGKQGGATEEEIIAATEASNAHNFISALPHGYE 1170 (1283)
Q Consensus 1091 l~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~I~~lp~Gld 1170 (1283)
+|+|++|+|.+||+|+++++.+++|+++++|+|||++|++|+++|+ .+++++++++++++.++++++++.+|+|||
T Consensus 391 ~~~p~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~lf~~ti~~n~----~~~~~~~~~~~~~~~~~l~~~~~~lp~g~~ 466 (555)
T TIGR01194 391 LYIPQEGEILLDGAAVSADSRDDYRDLFSAIFADFHLFDDLIGPDE----GEHASLDNAQQYLQRLEIADKVKIEDGGFS 466 (555)
T ss_pred CCCCCCcEEEECCEECCCCCHHHHHhhCcEEccChhhhhhhhhccc----ccchhHHHHHHHHHHcCCchhhcccccccC
Confidence 9999999999999999999999999999999999999999999995 235789999999999999999999999999
Q ss_pred cccCCCCCCCChhHHHHHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHH-H-cCCceEEEEecCchHHhhcCEEE
Q 000789 1171 TNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALER-V-MVNRTTVVVAHRLTTIKNADIIA 1248 (1283)
Q Consensus 1171 t~vge~G~~LSgGQrQRlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~-~-~~~~TvI~IaHrl~ti~~~D~I~ 1248 (1283)
|. .+|||||||||+||||++++|+|||||||||+||+++|+.|++.+.+ . .+++|+|+||||+++++.||+|+
T Consensus 467 t~-----~~LSgGq~qRlalaRall~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tiiiisH~~~~~~~~d~i~ 541 (555)
T TIGR01194 467 TT-----TALSTGQQKRLALICAWLEDRPILLFDEWAADQDPAFKRFFYEELLPDLKRQGKTIIIISHDDQYFELADQII 541 (555)
T ss_pred Cc-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHhCCEEE
Confidence 95 68999999999999999999999999999999999999999987643 3 46899999999999999999999
Q ss_pred EEeCCEEEEe
Q 000789 1249 VVKNGVIAEQ 1258 (1283)
Q Consensus 1249 vl~~G~Ive~ 1258 (1283)
||++|+++|.
T Consensus 542 ~l~~G~i~~~ 551 (555)
T TIGR01194 542 KLAAGCIVKD 551 (555)
T ss_pred EEECCEEEEe
Confidence 9999999874
No 77
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=1.7e-72 Score=691.55 Aligned_cols=455 Identities=23% Similarity=0.383 Sum_probs=353.5
Q ss_pred cEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHH-Hhcc
Q 000789 374 EIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKW-IREK 452 (1283)
Q Consensus 374 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~-~r~~ 452 (1283)
-|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... .+++
T Consensus 4 ~i~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 80 (501)
T PRK10762 4 LLQLKGIDKAFPG---VKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRDAGSILYLGKEVTFNGPKSSQEAG 80 (501)
T ss_pred eEEEeeeEEEeCC---eEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHhCC
Confidence 4899999999963 36999999999999999999999999999999999999999999999999987655443 4578
Q ss_pred cEEEccCCCCCcc-cHHHHHhcCCCC------CCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHH
Q 000789 453 IGLVSQEPILFAT-SLRENIAYGKEN------ATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIA 525 (1283)
Q Consensus 453 i~~v~Q~~~l~~~-ti~~ni~~~~~~------~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiA 525 (1283)
++||+|++.++.. |++||+.++... .+..+..+ .+.+.++.+ |+.........+||||||||++||
T Consensus 81 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la 153 (501)
T PRK10762 81 IGIIHQELNLIPQLTIAENIFLGREFVNRFGRIDWKKMYA-----EADKLLARL--NLRFSSDKLVGELSIGEQQMVEIA 153 (501)
T ss_pred EEEEEcchhccCCCcHHHHhhhccccccccCccCHHHHHH-----HHHHHHHHc--CCCCCccCchhhCCHHHHHHHHHH
Confidence 9999999988865 999999986421 11221111 233455555 666656677789999999999999
Q ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHHhcCCC
Q 000789 526 RAILKNPKILLLDEATSALDAESERIVQDALVKIM-TSRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDELIKDPE 603 (1283)
Q Consensus 526 Ral~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~~~ 603 (1283)
|||+.+|++|||||||++||+.+.+.+.+.|+++. +++|+|+|||+++.+.. ||+|++|++|++++.|+.+++...
T Consensus 154 ~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~-- 231 (501)
T PRK10762 154 KVLSFESKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHRLKEIFEICDDVTVFRDGQFIAEREVADLTED-- 231 (501)
T ss_pred HHHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEecCcCcCCHH--
Confidence 99999999999999999999999999999999874 36899999999999875 999999999999887653322100
Q ss_pred ChhHHHHHHhhcCchhhhhhhccccccCchhhhhhhhhcCCCCCCccccccccccCCCCCCccccccCCCCCCCcccccc
Q 000789 604 GPYTQLVRLQEGSKEAEDALATDADKLDSSFDILDKAMTRSGSRGESMRRSISRHSSGSRHSFGFTYGVPGPINVFETEE 683 (1283)
Q Consensus 604 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 683 (1283)
.+. +
T Consensus 232 ----~~~----------~-------------------------------------------------------------- 235 (501)
T PRK10762 232 ----SLI----------E-------------------------------------------------------------- 235 (501)
T ss_pred ----HHH----------H--------------------------------------------------------------
Confidence 000 0
Q ss_pred CCCCCCCCchhhHhhhhhHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhhhhHHHHHH
Q 000789 684 GDQGGAERTPLMIEKRQKLSMRRLAYLNKPEFPVLLIGSIAAGIHGVIFPIFGLLLSSSIRMFFEPEDKLRKDSRFWALI 763 (1283)
Q Consensus 684 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 763 (1283)
.+
T Consensus 236 -------------------------------------------------------------~~----------------- 237 (501)
T PRK10762 236 -------------------------------------------------------------MM----------------- 237 (501)
T ss_pred -------------------------------------------------------------Hh-----------------
Confidence 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChhHHHHHHhhhHHHHHHHHHHHHHHHHH
Q 000789 764 YLVLGIINLIAVPFQNYFFGVAGGKLIRRIRSLTFEKVVHQEISWFDDPANSSGSVGARLSTDASTIRSLVGDSLALVVQ 843 (1283)
Q Consensus 764 ~~~l~~~~~l~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~ff~~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~ 843 (1283)
+.. .
T Consensus 238 ---------------------------------------------~~~-~------------------------------ 241 (501)
T PRK10762 238 ---------------------------------------------VGR-K------------------------------ 241 (501)
T ss_pred ---------------------------------------------cCC-C------------------------------
Confidence 000 0
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHH
Q 000789 844 NIATIAAGLIIAFTANWILAFVILAVSPLMLVQGYTQTKFMKGFSADAKLMYEEASQVANDAVGSIRTVASFCSEEKVMD 923 (1283)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~ 923 (1283)
T Consensus 242 -------------------------------------------------------------------------------- 241 (501)
T PRK10762 242 -------------------------------------------------------------------------------- 241 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhcHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 924 LYEKKCEGPLKNGVRRGILSGAGFGFSFLVLYCTNAFCFYIGSVLVEHGKATFGQVFKVFFALTISALGVSQTSAMAPDT 1003 (1283)
Q Consensus 924 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1003 (1283)
T Consensus 242 -------------------------------------------------------------------------------- 241 (501)
T PRK10762 242 -------------------------------------------------------------------------------- 241 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCCcCCccCCCcccEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHH
Q 000789 1004 TKAKDSAASIFEILDSKPKIDSSKDEGMTLSSVGGAIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKST 1083 (1283)
Q Consensus 1004 ~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKST 1083 (1283)
.. ...+.... +.....|+++||++ ++|+|+||+|++||++||+|+|||||||
T Consensus 242 ---------~~---~~~~~~~~--------~~~~~~l~~~~l~~--------~~l~~vsl~i~~Ge~~~liG~NGsGKST 293 (501)
T PRK10762 242 ---------LE---DQYPRLDK--------APGEVRLKVDNLSG--------PGVNDVSFTLRKGEILGVSGLMGAGRTE 293 (501)
T ss_pred ---------cc---cccccccc--------CCCCcEEEEeCccc--------CCcccceEEEcCCcEEEEecCCCCCHHH
Confidence 00 00000000 00011488999974 2699999999999999999999999999
Q ss_pred HHHHHhccCCCCcceEEECCccCCCCCh-HHHhcceEEEccCC---CCC-hhhHHHHHhcCCCC---C----CCHHHHHH
Q 000789 1084 VIALIERFYDPDSGHVLLDNIELPKFKL-SWLRQQMGLVSQEP---VLF-NETIRTNIAYGKQG---G----ATEEEIIA 1151 (1283)
Q Consensus 1084 L~~lL~rl~~~~~G~I~idG~di~~~~~-~~lR~~i~~V~Qdp---~Lf-~gTIreNl~~g~~~---~----~sd~ei~~ 1151 (1283)
|+++|.|+++|++|+|.+||.++...+. +.+|++++||||+| .+| ..|++||+.++... . .+.++..
T Consensus 294 Ll~~l~G~~~p~~G~I~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~- 372 (501)
T PRK10762 294 LMKVLYGALPRTSGYVTLDGHEVVTRSPQDGLANGIVYISEDRKRDGLVLGMSVKENMSLTALRYFSRAGGSLKHADEQ- 372 (501)
T ss_pred HHHHHhCCCCCCceEEEECCEECCCCCHHHHHHCCCEEecCccccCCCcCCCcHHHHhhhhhhhhhcccccccCHHHHH-
Confidence 9999999999999999999999876654 34678899999997 344 57999999764210 0 1111111
Q ss_pred HHHHhChHHHHHhCCCCcc-cccCCCCCCCChhHHHHHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHc-CCc
Q 000789 1152 ATEASNAHNFISALPHGYE-TNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVM-VNR 1229 (1283)
Q Consensus 1152 al~~a~l~~~I~~lp~Gld-t~vge~G~~LSgGQrQRlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~-~~~ 1229 (1283)
..+.+++..+ |+. .........||||||||++||||++.+|+||||||||++||+.+.+.+.+.|+++. +++
T Consensus 373 ----~~~~~~l~~~--~l~~~~~~~~~~~LSgGekqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~ 446 (501)
T PRK10762 373 ----QAVSDFIRLF--NIKTPSMEQAIGLLSGGNQQKVAIARGLMTRPKVLILDEPTRGVDVGAKKEIYQLINQFKAEGL 446 (501)
T ss_pred ----HHHHHHHHhc--CCCCCCccCchhhCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCCCHhHHHHHHHHHHHHHHCCC
Confidence 1122334333 332 22344456899999999999999999999999999999999999999999999875 478
Q ss_pred eEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHHH
Q 000789 1230 TTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDALM 1265 (1283)
Q Consensus 1230 TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl 1265 (1283)
|+|+|||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 447 tviivtHd~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 483 (501)
T PRK10762 447 SIILVSSEMPEVLGMSDRILVMHEGRISGEFTREQAT 483 (501)
T ss_pred EEEEEcCCHHHHHhhCCEEEEEECCEEEEEeccccCC
Confidence 99999999999876 9999999999999999887753
No 78
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=2.2e-72 Score=694.42 Aligned_cols=458 Identities=24% Similarity=0.429 Sum_probs=350.3
Q ss_pred EEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCC--CCCCceEEEC---------------
Q 000789 375 IELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFY--DPDAGEVLID--------------- 437 (1283)
Q Consensus 375 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~--~~~~G~i~~~--------------- 437 (1283)
|+++|++++|++ .++|+|+||++++|++++|+||||||||||+++|+|+. +|++|+|.++
T Consensus 1 l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~iiG~nGsGKSTLl~~l~Gl~~~~p~~G~i~~~~~~~~~~~~~~~~~~ 77 (520)
T TIGR03269 1 IEVKNLTKKFDG---KEVLKNISFTIEEGEVLGILGRSGAGKSVLMHVLRGMDQYEPTSGRIIYHVALCEKCGYVERPSK 77 (520)
T ss_pred CEEEEEEEEECC---eEeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhhcccCCCCceEEEEeccccccccccccccc
Confidence 578999999963 36999999999999999999999999999999999996 7999999997
Q ss_pred --------CcccC-------CCC---HHHHhcccEEEccC-CCCCc-ccHHHHHhcCCC--CCCHHHHHHHHHHhcHHHH
Q 000789 438 --------GIDIK-------KLQ---LKWIREKIGLVSQE-PILFA-TSLRENIAYGKE--NATDQEIRTAIELANAAKF 495 (1283)
Q Consensus 438 --------g~~~~-------~~~---~~~~r~~i~~v~Q~-~~l~~-~ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~ 495 (1283)
|.++. ..+ ...+|+.++||+|+ +.+|+ .|++||+.++.. ....++.. ..+.+.
T Consensus 78 ~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~-----~~~~~~ 152 (520)
T TIGR03269 78 VGEPCPVCGGTLEPEEVDFWNLSDKLRRRIRKRIAIMLQRTFALYGDDTVLDNVLEALEEIGYEGKEAV-----GRAVDL 152 (520)
T ss_pred cccccccccccccccchhhhccCHHHHHHhhhcEEEEeccccccCCCCCHHHHHHHHHHHcCCCHHHHH-----HHHHHH
Confidence 33321 111 12457789999998 56776 499999987532 11222211 122344
Q ss_pred HHhCCCCccccccCCCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCch
Q 000789 496 IDKLPKGLDTMAGEHGTQLSGGQKQRIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMT--SRTTVVVAHRLT 573 (1283)
Q Consensus 496 i~~lp~g~~t~~~~~g~~LSgGqkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~ 573 (1283)
++.+ |++........+||||||||++|||||+.+|++|||||||++||+++.+.+.+.|+++.+ ++|+|+|||+++
T Consensus 153 l~~~--gl~~~~~~~~~~LSgGq~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivtHd~~ 230 (520)
T TIGR03269 153 IEMV--QLSHRITHIARDLSGGEKQRVVLARQLAKEPFLFLADEPTGTLDPQTAKLVHNALEEAVKASGISMVLTSHWPE 230 (520)
T ss_pred HHHc--CChhhhhcCcccCCHHHHHHHHHHHHHhcCCCEEEeeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH
Confidence 5555 666556667789999999999999999999999999999999999999999999998743 689999999999
Q ss_pred hhhc-cCEEEEEeCCEEeEecChhHHhcCCCChhHHHHHHhhcCchhhhhhhccccccCchhhhhhhhhcCCCCCCcccc
Q 000789 574 TIRN-ADLIAVVHQGKIVEKGTHDELIKDPEGPYTQLVRLQEGSKEAEDALATDADKLDSSFDILDKAMTRSGSRGESMR 652 (1283)
Q Consensus 574 ~~~~-~d~i~vl~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 652 (1283)
.+.. ||+|++|++|++++.|+++++... |.
T Consensus 231 ~~~~~~d~i~~l~~G~i~~~g~~~~~~~~----~~--------------------------------------------- 261 (520)
T TIGR03269 231 VIEDLSDKAIWLENGEIKEEGTPDEVVAV----FM--------------------------------------------- 261 (520)
T ss_pred HHHHhcCEEEEEeCCEEeeecCHHHHHHH----HH---------------------------------------------
Confidence 9875 999999999999876654332100 00
Q ss_pred ccccccCCCCCCccccccCCCCCCCccccccCCCCCCCCchhhHhhhhhHHHHHHHHhhcChhHHHHHHHHHHHHHHHHH
Q 000789 653 RSISRHSSGSRHSFGFTYGVPGPINVFETEEGDQGGAERTPLMIEKRQKLSMRRLAYLNKPEFPVLLIGSIAAGIHGVIF 732 (1283)
Q Consensus 653 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 732 (1283)
T Consensus 262 -------------------------------------------------------------------------------- 261 (520)
T TIGR03269 262 -------------------------------------------------------------------------------- 261 (520)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHhcCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccC
Q 000789 733 PIFGLLLSSSIRMFFEPEDKLRKDSRFWALIYLVLGIINLIAVPFQNYFFGVAGGKLIRRIRSLTFEKVVHQEISWFDDP 812 (1283)
Q Consensus 733 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~ff~~~ 812 (1283)
.
T Consensus 262 -----------------------------------------------------------------------------~-- 262 (520)
T TIGR03269 262 -----------------------------------------------------------------------------E-- 262 (520)
T ss_pred -----------------------------------------------------------------------------h--
Confidence 0
Q ss_pred CCChhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Q 000789 813 ANSSGSVGARLSTDASTIRSLVGDSLALVVQNIATIAAGLIIAFTANWILAFVILAVSPLMLVQGYTQTKFMKGFSADAK 892 (1283)
Q Consensus 813 ~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~ 892 (1283)
. + .
T Consensus 263 -~---------------------------------------------~------------------------~------- 265 (520)
T TIGR03269 263 -G---------------------------------------------V------------------------S------- 265 (520)
T ss_pred -h---------------------------------------------c------------------------h-------
Confidence 0 0 0
Q ss_pred HHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHhcHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 000789 893 LMYEEASQVANDAVGSIRTVASFCSEEKVMDLYEKKCEGPLKNGVRRGILSGAGFGFSFLVLYCTNAFCFYIGSVLVEHG 972 (1283)
Q Consensus 893 ~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~g 972 (1283)
T Consensus 266 -------------------------------------------------------------------------------- 265 (520)
T TIGR03269 266 -------------------------------------------------------------------------------- 265 (520)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCcCCccCCCcccEEEEEEEEECCC-
Q 000789 973 KATFGQVFKVFFALTISALGVSQTSAMAPDTTKAKDSAASIFEILDSKPKIDSSKDEGMTLSSVGGAIELRCVSFKYPT- 1051 (1283)
Q Consensus 973 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~nVsf~Y~~- 1051 (1283)
++ ...+.. +. ....|+++||+++|+.
T Consensus 266 ---------------------------------------~~----~~~~~~----~~------~~~~l~~~~l~~~~~~~ 292 (520)
T TIGR03269 266 ---------------------------------------EV----EKECEV----EV------GEPIIKVRNVSKRYISV 292 (520)
T ss_pred ---------------------------------------hh----cccccc----CC------CCceEEEeccEEEeccC
Confidence 00 000000 00 0114999999999963
Q ss_pred -CCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEEC-Ccc---CCCCC---hHHHhcceEEEcc
Q 000789 1052 -RPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLD-NIE---LPKFK---LSWLRQQMGLVSQ 1123 (1283)
Q Consensus 1052 -~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~id-G~d---i~~~~---~~~lR~~i~~V~Q 1123 (1283)
+...++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++ |.+ +...+ ...+|++++||||
T Consensus 293 ~~~~~~il~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~~g~~~~~~~~~~~~~~~~~~~~i~~v~q 372 (520)
T TIGR03269 293 DRGVVKAVDNVSLEVKEGEIFGIVGTSGAGKTTLSKIIAGVLEPTSGEVNVRVGDEWVDMTKPGPDGRGRAKRYIGILHQ 372 (520)
T ss_pred CCCCceEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEEecCCccccccccchhhHHHHhhhEEEEcc
Confidence 112469999999999999999999999999999999999999999999996 643 33332 2346778999999
Q ss_pred CCCCCh-hhHHHHHhcCCCCCCC----HHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHHHHHccCC
Q 000789 1124 EPVLFN-ETIRTNIAYGKQGGAT----EEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNP 1198 (1283)
Q Consensus 1124 dp~Lf~-gTIreNl~~g~~~~~s----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiARAll~~p 1198 (1283)
++.+|. .|++||+.++.....+ ++++.++++..++.+. ..+.........||||||||++|||||+.+|
T Consensus 373 ~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~l~~~~l~~~------~~~~~~~~~~~~LSgGq~qrv~laral~~~p 446 (520)
T TIGR03269 373 EYDLYPHRTVLDNLTEAIGLELPDELARMKAVITLKMVGFDEE------KAEEILDKYPDELSEGERHRVALAQVLIKEP 446 (520)
T ss_pred CcccCCCCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCCCCc------cchhhhhCChhhCCHHHHHHHHHHHHHhcCC
Confidence 998876 5999999753110111 1234445555544210 0000122334579999999999999999999
Q ss_pred CEEEEecccCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHHHh
Q 000789 1199 KILLLDEATSALDAESERVVQDALERVMV--NRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDALMK 1266 (1283)
Q Consensus 1199 ~ILiLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl~ 1266 (1283)
+||||||||++||+.+.+.+.+.|+++.+ +.|+|+|||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 447 ~lLllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 517 (520)
T TIGR03269 447 RIVILDEPTGTMDPITKVDVTHSILKAREEMEQTFIIVSHDMDFVLDVCDRAALMRDGKIVKIGDPEEIVE 517 (520)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 99999999999999999999999988753 7899999999999876 99999999999999999998865
No 79
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=1e-70 Score=617.09 Aligned_cols=524 Identities=23% Similarity=0.297 Sum_probs=460.2
Q ss_pred HHHHHHHHHHHHHHHHhcCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccc
Q 000789 730 VIFPIFGLLLSSSIRMFFEPEDKLRKDSRFWALIYLVLGIINLIAVPFQNYFFGVAGGKLIRRIRSLTFEKVVHQEISWF 809 (1283)
Q Consensus 730 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~ff 809 (1283)
+++...++++-++.+-.... ....+......+.+++.++..++-+++...+.+.+.++..+++..+|...++++..-
T Consensus 37 iL~L~~~lyMLQVyDRVL~S--~s~~TLv~Ltvlal~ly~~~glLd~iR~~~l~Rig~~lD~~L~~~v~~a~~~~~l~~- 113 (580)
T COG4618 37 LLALTGPLYMLQVYDRVLPS--RSVPTLVMLTVLALGLYAFQGLLDAIRSRVLVRIGERLDRQLNGPVFAASFSAPLLR- 113 (580)
T ss_pred HHHHhhhHHHHHHHhhhccC--CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhhHHhh-
Confidence 33334444444555443321 112222333344445566777888899999999999999999999999998666543
Q ss_pred ccCCCChhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Q 000789 810 DDPANSSGSVGARLSTDASTIRSLVGDSLALVVQNIATIAAGLIIAFTANWILAFVILAVSPLMLVQGYTQTKFMKGFSA 889 (1283)
Q Consensus 810 ~~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~ 889 (1283)
+..|+-. ..-+|.++++.+++..-...+.+...+-+.+.++|.++++++++.++...+++...++..+..++..+
T Consensus 114 ----~~~g~~~-Q~LrDL~qvR~Fltg~g~~A~fDaPW~P~yl~v~fl~Hp~lG~~a~~ga~iLv~la~ln~~~t~~p~~ 188 (580)
T COG4618 114 ----RGSGDGL-QPLRDLDQVRQFLTGTGLTAFFDAPWMPLYLAVIFLFHPWLGLIALAGAIILVVLALLNERATRKPLK 188 (580)
T ss_pred ----cCCCccc-cchhhHHHHHHHHcCCCcchhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHH
Confidence 2233222 23479999999999887788888888888999999999999999999999999988988888888888
Q ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHhcHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 890 DAKLMYEEASQVANDAVGSIRTVASFCSEEKVMDLYEKKCEGPLKNGVRRGILSGAGFGFSFLVLYCTNAFCFYIGSVLV 969 (1283)
Q Consensus 890 ~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~ 969 (1283)
+..+...+.+.+...+.++.++|+++|+.....++|.+....+.....+..-..+.+.+++..+-++.+..++.+|.+++
T Consensus 189 eA~~~~~~~~~~~~a~~RNAEvi~AMGM~~~l~~rW~~~~~~~L~~~~~asd~~~~~~~~Sr~~Rm~lQs~iLg~GA~Lv 268 (580)
T COG4618 189 EASEASIRANQLADATLRNAEVIEAMGMLGNLAKRWGRFNAAYLSAQERASDRNGAFGALSRALRMALQSAVLGLGAWLV 268 (580)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcceeeE
Confidence 88888888899999999999999999999999999999999999888888888888889999999999999999999999
Q ss_pred hcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCcCCccCCCcccEEEEEEEEEC
Q 000789 970 EHGKATFGQVFKVFFALTISALGVSQTSAMAPDTTKAKDSAASIFEILDSKPKIDSSKDEGMTLSSVGGAIELRCVSFKY 1049 (1283)
Q Consensus 970 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~nVsf~Y 1049 (1283)
..|++|.|.+++..........|+...+..|.++..+..+..|+.+++...|...+ ..+.|..+|.+.++++++.=
T Consensus 269 i~ge~t~G~mIA~SIl~gRaLaPid~aI~~Wkq~~~Ar~s~~Rl~~lL~~~p~~~~----~m~LP~P~g~L~Ve~l~~~P 344 (580)
T COG4618 269 IKGEITPGMMIAGSILSGRALAPIDLAIANWKQFVAARQSYKRLNELLAELPAAAE----RMPLPAPQGALSVERLTAAP 344 (580)
T ss_pred EcCcCCcchhhHHHHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccC----CCCCCCCCceeeEeeeeecC
Confidence 99999999999999999999999999999999999999999999999987765432 34556678999999999977
Q ss_pred CCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHhcceEEEccCCCCCh
Q 000789 1050 PTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMGLVSQEPVLFN 1129 (1283)
Q Consensus 1050 ~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qdp~Lf~ 1129 (1283)
|+. .+|+|+|+||+++|||-+||+||||||||||.++|.|.+.|.+|.|.+||-|+++.+.+++-++|||.|||..||+
T Consensus 345 Pg~-~~pil~~isF~l~~G~~lgIIGPSgSGKSTLaR~lvG~w~p~~G~VRLDga~l~qWd~e~lG~hiGYLPQdVeLF~ 423 (580)
T COG4618 345 PGQ-KKPILKGISFALQAGEALGIIGPSGSGKSTLARLLVGIWPPTSGSVRLDGADLRQWDREQLGRHIGYLPQDVELFD 423 (580)
T ss_pred CCC-CCcceecceeEecCCceEEEECCCCccHHHHHHHHHcccccCCCcEEecchhhhcCCHHHhccccCcCcccceecC
Confidence 654 5789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHhcCCCCCCCHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHHHHHccCCCEEEEecccCC
Q 000789 1130 ETIRTNIAYGKQGGATEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSA 1209 (1283)
Q Consensus 1130 gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiARAll~~p~ILiLDEaTSa 1209 (1283)
|||+|||+-. .++.+++.|.+|++.++.||.|.+||+||||.|||+|..|||||||||+|||||+.+|.+++||||-|+
T Consensus 424 GTIaeNIaRf-~~~~d~~kIieAA~lAgvHelIl~lP~GYdT~iG~~G~~LSgGQRQRIaLARAlYG~P~lvVLDEPNsN 502 (580)
T COG4618 424 GTIAENIARF-GEEADPEKVIEAARLAGVHELILRLPQGYDTRIGEGGATLSGGQRQRIALARALYGDPFLVVLDEPNSN 502 (580)
T ss_pred CcHHHHHHhc-cccCCHHHHHHHHHHcChHHHHHhCcCCccCccCCCCCCCCchHHHHHHHHHHHcCCCcEEEecCCCCC
Confidence 9999999743 246899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHc-CCceEEEEecCchHHhhcCEEEEEeCCEEEEecChHHHHhc
Q 000789 1210 LDAESERVVQDALERVM-VNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALMKI 1267 (1283)
Q Consensus 1210 LD~~te~~I~~~L~~~~-~~~TvI~IaHrl~ti~~~D~I~vl~~G~Ive~Gt~~eLl~~ 1267 (1283)
||.+-|+.+.++|.+.. +|+|+|+||||++.+..+|+|+||++|++..+|+-+|.+++
T Consensus 503 LD~~GE~AL~~Ai~~~k~rG~~vvviaHRPs~L~~~Dkilvl~~G~~~~FG~r~eVLa~ 561 (580)
T COG4618 503 LDSEGEAALAAAILAAKARGGTVVVIAHRPSALASVDKILVLQDGRIAAFGPREEVLAK 561 (580)
T ss_pred cchhHHHHHHHHHHHHHHcCCEEEEEecCHHHHhhcceeeeecCChHHhcCCHHHHHHH
Confidence 99999999999998865 68999999999999999999999999999999999999875
No 80
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=4.2e-69 Score=712.80 Aligned_cols=221 Identities=25% Similarity=0.436 Sum_probs=191.5
Q ss_pred ccEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHHhcc
Q 000789 373 GEIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWIREK 452 (1283)
Q Consensus 373 ~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~ 452 (1283)
..|+++||++.|++. ++++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. +....|+.
T Consensus 927 ~~L~I~nLsK~y~~~-~k~aL~~lsl~I~~Gei~aLLG~NGAGKSTLLkiLaGLl~PtsG~I~i~G~dI~~-~~~~~r~~ 1004 (2272)
T TIGR01257 927 PGVCVKNLVKIFEPS-GRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPPTSGTVLVGGKDIET-NLDAVRQS 1004 (2272)
T ss_pred ceEEEEeEEEEecCC-CceEEEeeEEEEcCCcEEEEECCCCChHHHHHHHHhcCCCCCceEEEECCEECcc-hHHHHhhc
Confidence 469999999999632 3469999999999999999999999999999999999999999999999999864 45667889
Q ss_pred cEEEccCCCCCcc-cHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHh
Q 000789 453 IGLVSQEPILFAT-SLRENIAYGKE--NATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARAIL 529 (1283)
Q Consensus 453 i~~v~Q~~~l~~~-ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARal~ 529 (1283)
+|||||++.+|+. ||+|||.++.. ..+.++..+ .+++.++.+ |++........+||||||||++|||||+
T Consensus 1005 IG~~pQ~~~L~~~LTV~E~L~f~~~lkg~~~~~~~~-----~v~~lL~~v--gL~~~~~~~~~~LSGGqKQRLsLArALi 1077 (2272)
T TIGR01257 1005 LGMCPQHNILFHHLTVAEHILFYAQLKGRSWEEAQL-----EMEAMLEDT--GLHHKRNEEAQDLSGGMQRKLSVAIAFV 1077 (2272)
T ss_pred EEEEecCCcCCCCCCHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHHHHH
Confidence 9999999999975 99999987521 122222211 233455555 7777777888999999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHHhcCC
Q 000789 530 KNPKILLLDEATSALDAESERIVQDALVKIMTSRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDELIKDP 602 (1283)
Q Consensus 530 ~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~~ 602 (1283)
.+|+|||||||||+||+.+++.+.+.|+++.+++|+|++||+++.+.. ||||++|++|++++.|++++|.++.
T Consensus 1078 ~~PkVLLLDEPTSGLDp~sr~~l~~lL~~l~~g~TIIltTHdmdea~~laDrI~iL~~GkL~~~Gs~~~Lk~~~ 1151 (2272)
T TIGR01257 1078 GDAKVVVLDEPTSGVDPYSRRSIWDLLLKYRSGRTIIMSTHHMDEADLLGDRIAIISQGRLYCSGTPLFLKNCF 1151 (2272)
T ss_pred cCCCEEEEECCCcCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHHHhc
Confidence 999999999999999999999999999998778999999999999976 9999999999999999999997653
No 81
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.3e-72 Score=686.53 Aligned_cols=457 Identities=23% Similarity=0.360 Sum_probs=350.9
Q ss_pred cEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCH-HHHhcc
Q 000789 374 EIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQL-KWIREK 452 (1283)
Q Consensus 374 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~-~~~r~~ 452 (1283)
.|+++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+. ..+|++
T Consensus 4 ~l~~~~l~~~~~~---~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~ 80 (501)
T PRK11288 4 YLSFDGIGKTFPG---VKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPDAGSILIDGQEMRFASTTAALAAG 80 (501)
T ss_pred eEEEeeeEEEECC---EEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHhCC
Confidence 4899999999963 359999999999999999999999999999999999999999999999999875543 456788
Q ss_pred cEEEccCCCCCcc-cHHHHHhcCCCC-----CCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHH
Q 000789 453 IGLVSQEPILFAT-SLRENIAYGKEN-----ATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIAR 526 (1283)
Q Consensus 453 i~~v~Q~~~l~~~-ti~~ni~~~~~~-----~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiAR 526 (1283)
|+||+|++.+|.. |++||+.++... ....+.. ..+.++++.+ |++........+||||||||++|||
T Consensus 81 i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LSgGq~qrv~lar 153 (501)
T PRK11288 81 VAIIYQELHLVPEMTVAENLYLGQLPHKGGIVNRRLLN-----YEAREQLEHL--GVDIDPDTPLKYLSIGQRQMVEIAK 153 (501)
T ss_pred EEEEEechhccCCCCHHHHHHhcccccccCCCCHHHHH-----HHHHHHHHHc--CCCCCcCCchhhCCHHHHHHHHHHH
Confidence 9999999988875 999999986421 1122211 1234556666 6655556677899999999999999
Q ss_pred HHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHHhcCCCC
Q 000789 527 AILKNPKILLLDEATSALDAESERIVQDALVKIM-TSRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDELIKDPEG 604 (1283)
Q Consensus 527 al~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~~~~ 604 (1283)
||+.+|++|||||||++||+.+.+.+.+.|+++. +++|+|+|||+++.+.. ||+|++|++|+|++.++..+...
T Consensus 154 al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiiitHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~---- 229 (501)
T PRK11288 154 ALARNARVIAFDEPTSSLSAREIEQLFRVIRELRAEGRVILYVSHRMEEIFALCDAITVFKDGRYVATFDDMAQVD---- 229 (501)
T ss_pred HHHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecCccccCC----
Confidence 9999999999999999999999999999999875 46899999999999876 99999999999985432100000
Q ss_pred hhHHHHHHhhcCchhhhhhhccccccCchhhhhhhhhcCCCCCCccccccccccCCCCCCccccccCCCCCCCccccccC
Q 000789 605 PYTQLVRLQEGSKEAEDALATDADKLDSSFDILDKAMTRSGSRGESMRRSISRHSSGSRHSFGFTYGVPGPINVFETEEG 684 (1283)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 684 (1283)
. + .
T Consensus 230 --------------~-~--------------------------------------------------------------~ 232 (501)
T PRK11288 230 --------------R-D--------------------------------------------------------------Q 232 (501)
T ss_pred --------------H-H--------------------------------------------------------------H
Confidence 0 0 0
Q ss_pred CCCCCCCchhhHhhhhhHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhhhhHHHHHHH
Q 000789 685 DQGGAERTPLMIEKRQKLSMRRLAYLNKPEFPVLLIGSIAAGIHGVIFPIFGLLLSSSIRMFFEPEDKLRKDSRFWALIY 764 (1283)
Q Consensus 685 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 764 (1283)
+
T Consensus 233 ----------------------~--------------------------------------------------------- 233 (501)
T PRK11288 233 ----------------------L--------------------------------------------------------- 233 (501)
T ss_pred ----------------------H---------------------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChhHHHHHHhhhHHHHHHHHHHHHHHHHHH
Q 000789 765 LVLGIINLIAVPFQNYFFGVAGGKLIRRIRSLTFEKVVHQEISWFDDPANSSGSVGARLSTDASTIRSLVGDSLALVVQN 844 (1283)
Q Consensus 765 ~~l~~~~~l~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~ff~~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~ 844 (1283)
.+.+ ...+..
T Consensus 234 ---------------------------------~~~~-------~~~~~~------------------------------ 243 (501)
T PRK11288 234 ---------------------------------VQAM-------VGREIG------------------------------ 243 (501)
T ss_pred ---------------------------------HHHh-------cCCCcc------------------------------
Confidence 0000 000000
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHH
Q 000789 845 IATIAAGLIIAFTANWILAFVILAVSPLMLVQGYTQTKFMKGFSADAKLMYEEASQVANDAVGSIRTVASFCSEEKVMDL 924 (1283)
Q Consensus 845 ~~~~~~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~ 924 (1283)
T Consensus 244 -------------------------------------------------------------------------------- 243 (501)
T PRK11288 244 -------------------------------------------------------------------------------- 243 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhcHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 925 YEKKCEGPLKNGVRRGILSGAGFGFSFLVLYCTNAFCFYIGSVLVEHGKATFGQVFKVFFALTISALGVSQTSAMAPDTT 1004 (1283)
Q Consensus 925 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1004 (1283)
T Consensus 244 -------------------------------------------------------------------------------- 243 (501)
T PRK11288 244 -------------------------------------------------------------------------------- 243 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCcCCccCCCcccEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHH
Q 000789 1005 KAKDSAASIFEILDSKPKIDSSKDEGMTLSSVGGAIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTV 1084 (1283)
Q Consensus 1005 ~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL 1084 (1283)
+. ....+. .. ....++++|++++ .+++|+||+|++||++||+||||||||||
T Consensus 244 -------~~---~~~~~~-----~~------~~~~l~~~~~~~~-------~~l~~isl~i~~Ge~~~iiG~NGsGKSTL 295 (501)
T PRK11288 244 -------DI---YGYRPR-----PL------GEVRLRLDGLKGP-------GLREPISFSVRAGEIVGLFGLVGAGRSEL 295 (501)
T ss_pred -------cc---cccccc-----CC------CCcEEEEeccccC-------CcccceeEEEeCCcEEEEEcCCCCCHHHH
Confidence 00 000000 00 0114889999742 38999999999999999999999999999
Q ss_pred HHHHhccCCCCcceEEECCccCCCCC-hHHHhcceEEEccCCC---CC-hhhHHHHHhcCCCCC-------CCHHHHHHH
Q 000789 1085 IALIERFYDPDSGHVLLDNIELPKFK-LSWLRQQMGLVSQEPV---LF-NETIRTNIAYGKQGG-------ATEEEIIAA 1152 (1283)
Q Consensus 1085 ~~lL~rl~~~~~G~I~idG~di~~~~-~~~lR~~i~~V~Qdp~---Lf-~gTIreNl~~g~~~~-------~sd~ei~~a 1152 (1283)
+++|+|+++|++|+|.+||.++...+ ...+|+.++|+||+|. +| ..|+.||+.++.... ....+-.
T Consensus 296 lk~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~-- 373 (501)
T PRK11288 296 MKLLYGATRRTAGQVYLDGKPIDIRSPRDAIRAGIMLCPEDRKAEGIIPVHSVADNINISARRHHLRAGCLINNRWEA-- 373 (501)
T ss_pred HHHHcCCCcCCCceEEECCEECCCCCHHHHHhCCCEEcCcCHhhCCCcCCCCHHHHhccccchhhcccccccChHHHH--
Confidence 99999999999999999999886543 3456789999999973 44 579999997642111 0111110
Q ss_pred HHHhChHHHHHhCCCCcc-cccCCCCCCCChhHHHHHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHc-CCce
Q 000789 1153 TEASNAHNFISALPHGYE-TNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVM-VNRT 1230 (1283)
Q Consensus 1153 l~~a~l~~~I~~lp~Gld-t~vge~G~~LSgGQrQRlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~-~~~T 1230 (1283)
..+.+++..+ |++ ........+||||||||++||||++.+|+||||||||++||+.+.+.+.+.|+++. .++|
T Consensus 374 ---~~~~~~l~~~--~l~~~~~~~~~~~LSgGq~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~t 448 (501)
T PRK11288 374 ---ENADRFIRSL--NIKTPSREQLIMNLSGGNQQKAILGRWLSEDMKVILLDEPTRGIDVGAKHEIYNVIYELAAQGVA 448 (501)
T ss_pred ---HHHHHHHHhc--CcccCCccCccccCCHHHHHHHHHHHHHccCCCEEEEcCCCCCCCHhHHHHHHHHHHHHHhCCCE
Confidence 1122333333 221 12233345899999999999999999999999999999999999999999998875 4789
Q ss_pred EEEEecCchHHhh-cCEEEEEeCCEEEEecChHHHH
Q 000789 1231 TVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDALM 1265 (1283)
Q Consensus 1231 vI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl 1265 (1283)
+|+|||+++.+.. ||++++|++|++++.|+++|..
T Consensus 449 viivsHd~~~~~~~~d~i~~l~~g~i~~~~~~~~~~ 484 (501)
T PRK11288 449 VLFVSSDLPEVLGVADRIVVMREGRIAGELAREQAT 484 (501)
T ss_pred EEEECCCHHHHHhhCCEEEEEECCEEEEEEccccCC
Confidence 9999999999976 9999999999999999988754
No 82
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=1.1e-71 Score=685.61 Aligned_cols=457 Identities=22% Similarity=0.345 Sum_probs=349.6
Q ss_pred EEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCC--CCceEEECCcccCCCCHHH-Hhc
Q 000789 375 IELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDP--DAGEVLIDGIDIKKLQLKW-IRE 451 (1283)
Q Consensus 375 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~--~~G~i~~~g~~~~~~~~~~-~r~ 451 (1283)
|+++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++| ++|+|.++|+++...+... .++
T Consensus 2 l~i~~l~~~~~~---~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 78 (500)
T TIGR02633 2 LEMKGIVKTFGG---VKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGSPLKASNIRDTERA 78 (500)
T ss_pred EEEEeEEEEeCC---eEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHhC
Confidence 789999999963 3699999999999999999999999999999999999987 7999999999998776544 467
Q ss_pred ccEEEccCCCCCcc-cHHHHHhcCCCC------CCHHHHHHHHHHhcHHHHHHhCCCCccccc-cCCCCCCChHHHHHHH
Q 000789 452 KIGLVSQEPILFAT-SLRENIAYGKEN------ATDQEIRTAIELANAAKFIDKLPKGLDTMA-GEHGTQLSGGQKQRIA 523 (1283)
Q Consensus 452 ~i~~v~Q~~~l~~~-ti~~ni~~~~~~------~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~-~~~g~~LSgGqkqria 523 (1283)
.|+||+|++.++.. |++||+.++... ...++.. ..+.+.++.+ |++... .....+||||||||++
T Consensus 79 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~~LSgG~~qrv~ 151 (500)
T TIGR02633 79 GIVIIHQELTLVPELSVAENIFLGNEITLPGGRMAYNAMY-----LRAKNLLREL--QLDADNVTRPVGDYGGGQQQLVE 151 (500)
T ss_pred CEEEEeeccccCCCCcHHHHHHhhccccccccccCHHHHH-----HHHHHHHHHc--CCCCCcccCchhhCCHHHHHHHH
Confidence 89999999988875 999999986421 1112211 1234455555 554433 3446789999999999
Q ss_pred HHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC-CCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHHhcC
Q 000789 524 IARAILKNPKILLLDEATSALDAESERIVQDALVKIMT-SRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDELIKD 601 (1283)
Q Consensus 524 iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~-~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~ 601 (1283)
|||||+.+|++|||||||++||+.+.+.+.+.|+++.+ ++|+|+|||+++.+.. ||+|++|++|++++.|+.+++...
T Consensus 152 iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiitHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 231 (500)
T TIGR02633 152 IAKALNKQARLLILDEPSSSLTEKETEILLDIIRDLKAHGVACVYISHKLNEVKAVCDTICVIRDGQHVATKDMSTMSED 231 (500)
T ss_pred HHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCcHHHHHHhCCEEEEEeCCeEeeecCcccCCHH
Confidence 99999999999999999999999999999999998754 6899999999999876 999999999999865432110000
Q ss_pred CCChhHHHHHHhhcCchhhhhhhccccccCchhhhhhhhhcCCCCCCccccccccccCCCCCCccccccCCCCCCCcccc
Q 000789 602 PEGPYTQLVRLQEGSKEAEDALATDADKLDSSFDILDKAMTRSGSRGESMRRSISRHSSGSRHSFGFTYGVPGPINVFET 681 (1283)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 681 (1283)
T Consensus 232 -------------------------------------------------------------------------------- 231 (500)
T TIGR02633 232 -------------------------------------------------------------------------------- 231 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCCCCCCCchhhHhhhhhHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhhhhHHHH
Q 000789 682 EEGDQGGAERTPLMIEKRQKLSMRRLAYLNKPEFPVLLIGSIAAGIHGVIFPIFGLLLSSSIRMFFEPEDKLRKDSRFWA 761 (1283)
Q Consensus 682 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 761 (1283)
. . . .
T Consensus 232 --~----------------------~-----------------------------------~-------~---------- 235 (500)
T TIGR02633 232 --D----------------------I-----------------------------------I-------T---------- 235 (500)
T ss_pred --H----------------------H-----------------------------------H-------H----------
Confidence 0 0 0 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChhHHHHHHhhhHHHHHHHHHHHHHHH
Q 000789 762 LIYLVLGIINLIAVPFQNYFFGVAGGKLIRRIRSLTFEKVVHQEISWFDDPANSSGSVGARLSTDASTIRSLVGDSLALV 841 (1283)
Q Consensus 762 ~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~ff~~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~ 841 (1283)
.+ +.. .
T Consensus 236 --------------------------------------~~-------~~~-~---------------------------- 241 (500)
T TIGR02633 236 --------------------------------------MM-------VGR-E---------------------------- 241 (500)
T ss_pred --------------------------------------HH-------hCc-c----------------------------
Confidence 00 000 0
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHH
Q 000789 842 VQNIATIAAGLIIAFTANWILAFVILAVSPLMLVQGYTQTKFMKGFSADAKLMYEEASQVANDAVGSIRTVASFCSEEKV 921 (1283)
Q Consensus 842 ~~~~~~~~~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~ 921 (1283)
T Consensus 242 -------------------------------------------------------------------------------- 241 (500)
T TIGR02633 242 -------------------------------------------------------------------------------- 241 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHhcHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 922 MDLYEKKCEGPLKNGVRRGILSGAGFGFSFLVLYCTNAFCFYIGSVLVEHGKATFGQVFKVFFALTISALGVSQTSAMAP 1001 (1283)
Q Consensus 922 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1001 (1283)
.
T Consensus 242 ----------------------------------------------------~--------------------------- 242 (500)
T TIGR02633 242 ----------------------------------------------------I--------------------------- 242 (500)
T ss_pred ----------------------------------------------------c---------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCCCCCcCCccCCCcccEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCH
Q 000789 1002 DTTKAKDSAASIFEILDSKPKIDSSKDEGMTLSSVGGAIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGK 1081 (1283)
Q Consensus 1002 ~~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGK 1081 (1283)
.. ..+.... +. .+.-|+++|++++|+...+..+|+|+||+|++||++||+|+|||||
T Consensus 243 ------------~~---~~~~~~~--~~------~~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~NGsGK 299 (500)
T TIGR02633 243 ------------TS---LYPHEPH--EI------GDVILEARNLTCWDVINPHRKRVDDVSFSLRRGEILGVAGLVGAGR 299 (500)
T ss_pred ------------cc---ccccccc--CC------CCceEEEeCCcccccccccccccccceeEEeCCcEEEEeCCCCCCH
Confidence 00 0000000 00 0114999999999953212359999999999999999999999999
Q ss_pred HHHHHHHhccCCC-CcceEEECCccCCCCC-hHHHhcceEEEccCC---CCCh-hhHHHHHhcCCCC------CCCH---
Q 000789 1082 STVIALIERFYDP-DSGHVLLDNIELPKFK-LSWLRQQMGLVSQEP---VLFN-ETIRTNIAYGKQG------GATE--- 1146 (1283)
Q Consensus 1082 STL~~lL~rl~~~-~~G~I~idG~di~~~~-~~~lR~~i~~V~Qdp---~Lf~-gTIreNl~~g~~~------~~sd--- 1146 (1283)
|||+++|+|+++| ++|+|.++|.++...+ ...+|++++||||++ .+|. .|+++|+.++... ....
T Consensus 300 STLl~~l~G~~~p~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~l~~~~tv~~~~~~~~~~~~~~~~~~~~~~~ 379 (500)
T TIGR02633 300 TELVQALFGAYPGKFEGNVFINGKPVDIRNPAQAIRAGIAMVPEDRKRHGIVPILGVGKNITLSVLKSFCFKMRIDAAAE 379 (500)
T ss_pred HHHHHHHhCCCCCCCCeEEEECCEECCCCCHHHHHhCCCEEcCcchhhCCcCCCCCHHHHhcchhhhhhccCCcCCHHHH
Confidence 9999999999995 8999999999986543 356788999999996 3554 6999999874211 0111
Q ss_pred -HHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHH
Q 000789 1147 -EEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERV 1225 (1283)
Q Consensus 1147 -~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~ 1225 (1283)
+++.++++..++ +. .........||||||||++||||++.+|++|||||||++||+.+.+.+++.|+++
T Consensus 380 ~~~~~~~l~~~~l-------~~---~~~~~~~~~LSgGqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l 449 (500)
T TIGR02633 380 LQIIGSAIQRLKV-------KT---ASPFLPIGRLSGGNQQKAVLAKMLLTNPRVLILDEPTRGVDVGAKYEIYKLINQL 449 (500)
T ss_pred HHHHHHHHHhcCc-------cC---CCccCccccCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHH
Confidence 123333333332 11 1122334579999999999999999999999999999999999999999999886
Q ss_pred c-CCceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHH
Q 000789 1226 M-VNRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDA 1263 (1283)
Q Consensus 1226 ~-~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~e 1263 (1283)
. ++.|+|+|||+++.+.. ||++++|++|+++..++.++
T Consensus 450 ~~~g~tviivsHd~~~~~~~~d~v~~l~~G~i~~~~~~~~ 489 (500)
T TIGR02633 450 AQEGVAIIVVSSELAEVLGLSDRVLVIGEGKLKGDFVNHA 489 (500)
T ss_pred HhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEEcccc
Confidence 4 47899999999999976 99999999999998776544
No 83
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=2.4e-71 Score=681.41 Aligned_cols=466 Identities=22% Similarity=0.377 Sum_probs=356.9
Q ss_pred cEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHHh-cc
Q 000789 374 EIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWIR-EK 452 (1283)
Q Consensus 374 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r-~~ 452 (1283)
.|+++|++++|++ .++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++...+...++ ..
T Consensus 11 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~ 87 (510)
T PRK15439 11 LLCARSISKQYSG---VEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPDSGTLEIGGNPCARLTPAKAHQLG 87 (510)
T ss_pred eEEEEeEEEEeCC---ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHHHhCC
Confidence 5999999999963 3599999999999999999999999999999999999999999999999999877765554 57
Q ss_pred cEEEccCCCCCcc-cHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHhcC
Q 000789 453 IGLVSQEPILFAT-SLRENIAYGKENATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARAILKN 531 (1283)
Q Consensus 453 i~~v~Q~~~l~~~-ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARal~~~ 531 (1283)
+|||+|++.++.. |++||+.++.... .+.. ..+.+.++.+ |++........+||||||||++|||||+.+
T Consensus 88 i~~v~q~~~~~~~~tv~e~l~~~~~~~--~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la~aL~~~ 158 (510)
T PRK15439 88 IYLVPQEPLLFPNLSVKENILFGLPKR--QASM-----QKMKQLLAAL--GCQLDLDSSAGSLEVADRQIVEILRGLMRD 158 (510)
T ss_pred EEEEeccCccCCCCcHHHHhhcccccc--hHHH-----HHHHHHHHHc--CCCccccCChhhCCHHHHHHHHHHHHHHcC
Confidence 9999999988875 9999999875321 1111 1123445555 666556677789999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHHhcCCCChhHHH
Q 000789 532 PKILLLDEATSALDAESERIVQDALVKIM-TSRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDELIKDPEGPYTQL 609 (1283)
Q Consensus 532 ~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~~~~~~~~~ 609 (1283)
|++|||||||++||+.+...+.+.|+++. +++|+|++||+++.+.. ||+|++|++|++++.|+++++... +.
T Consensus 159 p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~------~~ 232 (510)
T PRK15439 159 SRILILDEPTASLTPAETERLFSRIRELLAQGVGIVFISHKLPEIRQLADRISVMRDGTIALSGKTADLSTD------DI 232 (510)
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecChHHcCHH------HH
Confidence 99999999999999999999999999875 46899999999999865 999999999999999887765321 00
Q ss_pred HHHhhcCchhhhhhhccccccCchhhhhhhhhcCCCCCCccccccccccCCCCCCccccccCCCCCCCccccccCCCCCC
Q 000789 610 VRLQEGSKEAEDALATDADKLDSSFDILDKAMTRSGSRGESMRRSISRHSSGSRHSFGFTYGVPGPINVFETEEGDQGGA 689 (1283)
Q Consensus 610 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 689 (1283)
.+.... . . . . . . .
T Consensus 233 ~~~~~~---------------~------------~---------------~---~---------~---------~--~-- 245 (510)
T PRK15439 233 IQAITP---------------A------------A---------------R---E---------K---------S--L-- 245 (510)
T ss_pred HHHHhC---------------c------------c---------------c---c---------c---------c--c--
Confidence 000000 0 0 0 0 0 0 0
Q ss_pred CCchhhHhhhhhHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhhhhHHHHHHHHHHHH
Q 000789 690 ERTPLMIEKRQKLSMRRLAYLNKPEFPVLLIGSIAAGIHGVIFPIFGLLLSSSIRMFFEPEDKLRKDSRFWALIYLVLGI 769 (1283)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 769 (1283)
T Consensus 246 -------------------------------------------------------------------------------- 245 (510)
T PRK15439 246 -------------------------------------------------------------------------------- 245 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 770 INLIAVPFQNYFFGVAGGKLIRRIRSLTFEKVVHQEISWFDDPANSSGSVGARLSTDASTIRSLVGDSLALVVQNIATIA 849 (1283)
Q Consensus 770 ~~~l~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~ff~~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~~ 849 (1283)
. ..
T Consensus 246 ----------------------------------------~--~~----------------------------------- 248 (510)
T PRK15439 246 ----------------------------------------S--AS----------------------------------- 248 (510)
T ss_pred ----------------------------------------c--cc-----------------------------------
Confidence 0 00
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHH
Q 000789 850 AGLIIAFTANWILAFVILAVSPLMLVQGYTQTKFMKGFSADAKLMYEEASQVANDAVGSIRTVASFCSEEKVMDLYEKKC 929 (1283)
Q Consensus 850 ~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~ 929 (1283)
T Consensus 249 -------------------------------------------------------------------------------- 248 (510)
T PRK15439 249 -------------------------------------------------------------------------------- 248 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hcHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 930 EGPLKNGVRRGILSGAGFGFSFLVLYCTNAFCFYIGSVLVEHGKATFGQVFKVFFALTISALGVSQTSAMAPDTTKAKDS 1009 (1283)
Q Consensus 930 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 1009 (1283)
.
T Consensus 249 ----~--------------------------------------------------------------------------- 249 (510)
T PRK15439 249 ----Q--------------------------------------------------------------------------- 249 (510)
T ss_pred ----c---------------------------------------------------------------------------
Confidence 0
Q ss_pred HHHHHHHhccCCCCCCCCCcCCccCCCcccEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHh
Q 000789 1010 AASIFEILDSKPKIDSSKDEGMTLSSVGGAIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIE 1089 (1283)
Q Consensus 1010 ~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~ 1089 (1283)
+. . ...++. ....+ ..+..|+++|++. .+|+|+||+|++||++||+|+||||||||+++|.
T Consensus 250 --~~-~-~~~~~~-~~~~~------~~~~~l~~~~l~~--------~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~ 310 (510)
T PRK15439 250 --KL-W-LELPGN-RRQQA------AGAPVLTVEDLTG--------EGFRNISLEVRAGEILGLAGVVGAGRTELAETLY 310 (510)
T ss_pred --cc-c-cccccc-ccccC------CCCceEEEeCCCC--------CCccceeEEEcCCcEEEEECCCCCCHHHHHHHHc
Confidence 00 0 000000 00000 0011489999983 1599999999999999999999999999999999
Q ss_pred ccCCCCcceEEECCccCCCCChHH-HhcceEEEccCC---CCCh-hhHHHHHhcCC---CCC-CCHHHHHHHHHHhChHH
Q 000789 1090 RFYDPDSGHVLLDNIELPKFKLSW-LRQQMGLVSQEP---VLFN-ETIRTNIAYGK---QGG-ATEEEIIAATEASNAHN 1160 (1283)
Q Consensus 1090 rl~~~~~G~I~idG~di~~~~~~~-lR~~i~~V~Qdp---~Lf~-gTIreNl~~g~---~~~-~sd~ei~~al~~a~l~~ 1160 (1283)
|+.+|++|+|.++|.++...+... +|++|+||||++ .+|. .|+.+|+.... ... ....+.. ..+.+
T Consensus 311 Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~l~~~~t~~~~l~~~~~~~~~~~~~~~~~~-----~~~~~ 385 (510)
T PRK15439 311 GLRPARGGRIMLNGKEINALSTAQRLARGLVYLPEDRQSSGLYLDAPLAWNVCALTHNRRGFWIKPAREN-----AVLER 385 (510)
T ss_pred CCCCCCCcEEEECCEECCCCCHHHHHhCCcEECCCChhhCCccCCCcHHHHHHhhhhhhhccccChHHHH-----HHHHH
Confidence 999999999999999998766544 467899999996 3564 59999985320 000 0111111 11223
Q ss_pred HHHhCCCCcc-cccCCCCCCCChhHHHHHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHc-CCceEEEEecCc
Q 000789 1161 FISALPHGYE-TNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVM-VNRTTVVVAHRL 1238 (1283)
Q Consensus 1161 ~I~~lp~Gld-t~vge~G~~LSgGQrQRlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHrl 1238 (1283)
++..+ |++ .........||||||||++||||++.+|+||||||||++||+.+.+.+.+.|+++. +++|+|+|||++
T Consensus 386 ~l~~~--~l~~~~~~~~~~~LSgG~kqrl~la~al~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tiIivsHd~ 463 (510)
T PRK15439 386 YRRAL--NIKFNHAEQAARTLSGGNQQKVLIAKCLEASPQLLIVDEPTRGVDVSARNDIYQLIRSIAAQNVAVLFISSDL 463 (510)
T ss_pred HHHHc--CCCCCCccCccccCCcHHHHHHHHHHHHhhCCCEEEECCCCcCcChhHHHHHHHHHHHHHhCCCEEEEECCCH
Confidence 34443 332 22344445799999999999999999999999999999999999999999999874 478999999999
Q ss_pred hHHhh-cCEEEEEeCCEEEEecChHHHHh
Q 000789 1239 TTIKN-ADIIAVVKNGVIAEQGSHDALMK 1266 (1283)
Q Consensus 1239 ~ti~~-~D~I~vl~~G~Ive~Gt~~eLl~ 1266 (1283)
+.+.. ||+|++|++|+++..|+++++..
T Consensus 464 ~~i~~~~d~i~~l~~G~i~~~~~~~~~~~ 492 (510)
T PRK15439 464 EEIEQMADRVLVMHQGEISGALTGAAINV 492 (510)
T ss_pred HHHHHhCCEEEEEECCEEEEEEccccCCH
Confidence 99976 99999999999999999987764
No 84
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=2.8e-69 Score=605.43 Aligned_cols=530 Identities=22% Similarity=0.279 Sum_probs=455.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 58 ISAIGSGLAHPFMTLIFGHLINSFGSSDRSHVVHEVSKVAVKFLYLAAGTGIAAFLQVSCWMVTGERQATRIRGLYLKTI 137 (1283)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~~~~~l 137 (1283)
+++.+..++....|+++-++.|.+..... ...+....++.+++.++.+++.+++.....+++.++..++...+|...
T Consensus 30 lfS~~INiL~L~~~lyMLQVyDRVL~S~s---~~TLv~Ltvlal~ly~~~glLd~iR~~~l~Rig~~lD~~L~~~v~~a~ 106 (580)
T COG4618 30 LFSAVINLLALTGPLYMLQVYDRVLPSRS---VPTLVMLTVLALGLYAFQGLLDAIRSRVLVRIGERLDRQLNGPVFAAS 106 (580)
T ss_pred HHHHHHHHHHHhhhHHHHHHHhhhccCCC---cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHH
Confidence 34444455566677788888998754321 112223334445556667788889999999999999999999999999
Q ss_pred HhCChhhHhccCCccHHHHHHHhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Q 000789 138 LRQDIGFFDTETTTGEVIGRMSGDTILIQEAMGE-KVGKFIQLMSTFFGGFVVALARGWFLALVLLACLPAIVIAGGSMA 216 (1283)
Q Consensus 138 l~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~ 216 (1283)
.+.+..-. ..|+=.+-+ +|.+.++.|++. .+..++...|+.+. +.++|.+++++.++.++...+++.+..+-.
T Consensus 107 ~~~~l~~~----~~g~~~Q~L-rDL~qvR~Fltg~g~~A~fDaPW~P~y-l~v~fl~Hp~lG~~a~~ga~iLv~la~ln~ 180 (580)
T COG4618 107 FSAPLLRR----GSGDGLQPL-RDLDQVRQFLTGTGLTAFFDAPWMPLY-LAVIFLFHPWLGLIALAGAIILVVLALLNE 180 (580)
T ss_pred HhhHHhhc----CCCccccch-hhHHHHHHHHcCCCcchhcCCchHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 87766433 334333322 599999999866 55666677777664 556778888899988888777777777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 217 LIMSKMSSRGQIAYSEAGTVVEQTVSGIRTVSSFTGEKQAIEKYNNKLQVAYRAAVQQGMVSGIGLGVLMLTVIGTYGLA 296 (1283)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (1283)
+..++-.++..+...+.+...+-+.++.++|++.|+.....++|.+.+..+.....+..-..+.+..++-.+-......+
T Consensus 181 ~~t~~p~~eA~~~~~~~~~~~~a~~RNAEvi~AMGM~~~l~~rW~~~~~~~L~~~~~asd~~~~~~~~Sr~~Rm~lQs~i 260 (580)
T COG4618 181 RATRKPLKEASEASIRANQLADATLRNAEVIEAMGMLGNLAKRWGRFNAAYLSAQERASDRNGAFGALSRALRMALQSAV 260 (580)
T ss_pred HHhhccHHHHHHHHHHHHHHHHHHhhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777788888888899999999999999999999999999999999999999888888888888877777777778888
Q ss_pred HHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCCcccCccccEE
Q 000789 297 VWYGSKLIIEKGYNGGTVINVIMAIMTGGMSLGQTSPCLNAFAGGQAAAYKMFETIKRKPKIDPYDTSGITLEKIEGEIE 376 (1283)
Q Consensus 297 ~~~g~~~v~~~~~t~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~i~ 376 (1283)
+..|++++++|++|+|.+++-...+.....|+-.....+..+..++.|.+|+.++|.+.|...+. .+.+..++.+.
T Consensus 261 Lg~GA~Lvi~ge~t~G~mIA~SIl~gRaLaPid~aI~~Wkq~~~Ar~s~~Rl~~lL~~~p~~~~~----m~LP~P~g~L~ 336 (580)
T COG4618 261 LGLGAWLVIKGEITPGMMIAGSILSGRALAPIDLAIANWKQFVAARQSYKRLNELLAELPAAAER----MPLPAPQGALS 336 (580)
T ss_pred HhcceeeEEcCcCCcchhhHHHHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCC----CCCCCCCceee
Confidence 88999999999999999998777677777899999999999999999999999999887664332 34456688999
Q ss_pred EEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHHhcccEEE
Q 000789 377 LRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWIREKIGLV 456 (1283)
Q Consensus 377 ~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v 456 (1283)
++++++.=|+. ++++|+|+||++++||.+|||||||||||||.++|.|.++|.+|.|.+||-|+++++.+.+-++|||.
T Consensus 337 Ve~l~~~PPg~-~~pil~~isF~l~~G~~lgIIGPSgSGKSTLaR~lvG~w~p~~G~VRLDga~l~qWd~e~lG~hiGYL 415 (580)
T COG4618 337 VERLTAAPPGQ-KKPILKGISFALQAGEALGIIGPSGSGKSTLARLLVGIWPPTSGSVRLDGADLRQWDREQLGRHIGYL 415 (580)
T ss_pred EeeeeecCCCC-CCcceecceeEecCCceEEEECCCCccHHHHHHHHHcccccCCCcEEecchhhhcCCHHHhccccCcC
Confidence 99999976654 57899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHhcCCCEEE
Q 000789 457 SQEPILFATSLRENIAYGKENATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARAILKNPKILL 536 (1283)
Q Consensus 457 ~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARal~~~~~ill 536 (1283)
|||..||+|||.|||+-..++.+++.+.+|++.++.||.|.++|+||||.+|+.|..|||||||||+||||||.||.+++
T Consensus 416 PQdVeLF~GTIaeNIaRf~~~~d~~kIieAA~lAgvHelIl~lP~GYdT~iG~~G~~LSgGQRQRIaLARAlYG~P~lvV 495 (580)
T COG4618 416 PQDVELFDGTIAENIARFGEEADPEKVIEAARLAGVHELILRLPQGYDTRIGEGGATLSGGQRQRIALARALYGDPFLVV 495 (580)
T ss_pred cccceecCCcHHHHHHhccccCCHHHHHHHHHHcChHHHHHhCcCCccCccCCCCCCCCchHHHHHHHHHHHcCCCcEEE
Confidence 99999999999999997777889999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhccCEEEEEeCCEEeEecChhHHhcC
Q 000789 537 LDEATSALDAESERIVQDALVKIM-TSRTTVVVAHRLTTIRNADLIAVVHQGKIVEKGTHDELIKD 601 (1283)
Q Consensus 537 lDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~~~l~~~ 601 (1283)
||||-|+||.+.|+.+.++|.+.+ ++.|+|+||||++.+..+|+|++|++|++...|+-+|.+++
T Consensus 496 LDEPNsNLD~~GE~AL~~Ai~~~k~rG~~vvviaHRPs~L~~~Dkilvl~~G~~~~FG~r~eVLa~ 561 (580)
T COG4618 496 LDEPNSNLDSEGEAALAAAILAAKARGGTVVVIAHRPSALASVDKILVLQDGRIAAFGPREEVLAK 561 (580)
T ss_pred ecCCCCCcchhHHHHHHHHHHHHHHcCCEEEEEecCHHHHhhcceeeeecCChHHhcCCHHHHHHH
Confidence 999999999999999999999886 47899999999999999999999999999999999998865
No 85
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-70 Score=673.36 Aligned_cols=454 Identities=21% Similarity=0.348 Sum_probs=348.6
Q ss_pred EEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCH-HHHhcccEE
Q 000789 377 LRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQL-KWIREKIGL 455 (1283)
Q Consensus 377 ~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~-~~~r~~i~~ 455 (1283)
++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+. ..++++++|
T Consensus 1 ~~nl~~~~~~---~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~ 77 (491)
T PRK10982 1 MSNISKSFPG---VKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKDSGSILFQGKEIDFKSSKEALENGISM 77 (491)
T ss_pred CCceEEEeCC---EEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCceEEEECCEECCCCCHHHHHhCCEEE
Confidence 3689999963 369999999999999999999999999999999999999999999999999876554 445778999
Q ss_pred EccCCCCCc-ccHHHHHhcCCCC-----CCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHh
Q 000789 456 VSQEPILFA-TSLRENIAYGKEN-----ATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARAIL 529 (1283)
Q Consensus 456 v~Q~~~l~~-~ti~~ni~~~~~~-----~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARal~ 529 (1283)
|+|++.++. .|++||+.++... .+.++.. ..+.+.++.+ |++........+||||||||++|||||+
T Consensus 78 v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LSgGq~qrv~lA~al~ 150 (491)
T PRK10982 78 VHQELNLVLQRSVMDNMWLGRYPTKGMFVDQDKMY-----RDTKAIFDEL--DIDIDPRAKVATLSVSQMQMIEIAKAFS 150 (491)
T ss_pred EecccccccCCCHHHHhhcccccccccccCHHHHH-----HHHHHHHHHc--CCCCCccCchhhCCHHHHHHHHHHHHHH
Confidence 999998775 4999999986421 1122211 1234556666 6766677778899999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHHhcCCCChhH
Q 000789 530 KNPKILLLDEATSALDAESERIVQDALVKIM-TSRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDELIKDPEGPYT 607 (1283)
Q Consensus 530 ~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~~~~~~~ 607 (1283)
.+|++|||||||++||+.+.+.+.+.|+++. +++|+|+|||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 151 ~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~------ 224 (491)
T PRK10982 151 YNAKIVIMDEPTSSLTEKEVNHLFTIIRKLKERGCGIVYISHKMEEIFQLCDEITILRDGQWIATQPLAGLTMD------ 224 (491)
T ss_pred hCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEeecChhhCCHH------
Confidence 9999999999999999999999999999875 46899999999999875 999999999999987754332100
Q ss_pred HHHHHhhcCchhhhhhhccccccCchhhhhhhhhcCCCCCCccccccccccCCCCCCccccccCCCCCCCccccccCCCC
Q 000789 608 QLVRLQEGSKEAEDALATDADKLDSSFDILDKAMTRSGSRGESMRRSISRHSSGSRHSFGFTYGVPGPINVFETEEGDQG 687 (1283)
Q Consensus 608 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 687 (1283)
+...
T Consensus 225 ~~~~---------------------------------------------------------------------------- 228 (491)
T PRK10982 225 KIIA---------------------------------------------------------------------------- 228 (491)
T ss_pred HHHH----------------------------------------------------------------------------
Confidence 0000
Q ss_pred CCCCchhhHhhhhhHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhhhhHHHHHHHHHH
Q 000789 688 GAERTPLMIEKRQKLSMRRLAYLNKPEFPVLLIGSIAAGIHGVIFPIFGLLLSSSIRMFFEPEDKLRKDSRFWALIYLVL 767 (1283)
Q Consensus 688 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 767 (1283)
T Consensus 229 -------------------------------------------------------------------------------- 228 (491)
T PRK10982 229 -------------------------------------------------------------------------------- 228 (491)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHH
Q 000789 768 GIINLIAVPFQNYFFGVAGGKLIRRIRSLTFEKVVHQEISWFDDPANSSGSVGARLSTDASTIRSLVGDSLALVVQNIAT 847 (1283)
Q Consensus 768 ~~~~~l~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~ff~~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~ 847 (1283)
.+ +.. .
T Consensus 229 --------------------------------~~-------~~~-~---------------------------------- 234 (491)
T PRK10982 229 --------------------------------MM-------VGR-S---------------------------------- 234 (491)
T ss_pred --------------------------------HH-------hCC-C----------------------------------
Confidence 00 000 0
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHH
Q 000789 848 IAAGLIIAFTANWILAFVILAVSPLMLVQGYTQTKFMKGFSADAKLMYEEASQVANDAVGSIRTVASFCSEEKVMDLYEK 927 (1283)
Q Consensus 848 ~~~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~ 927 (1283)
T Consensus 235 -------------------------------------------------------------------------------- 234 (491)
T PRK10982 235 -------------------------------------------------------------------------------- 234 (491)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhcHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 928 KCEGPLKNGVRRGILSGAGFGFSFLVLYCTNAFCFYIGSVLVEHGKATFGQVFKVFFALTISALGVSQTSAMAPDTTKAK 1007 (1283)
Q Consensus 928 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1007 (1283)
.
T Consensus 235 ----------------------------------------------~--------------------------------- 235 (491)
T PRK10982 235 ----------------------------------------------L--------------------------------- 235 (491)
T ss_pred ----------------------------------------------c---------------------------------
Confidence 0
Q ss_pred HHHHHHHHHhccCCCCCCCCCcCCccCCCcccEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHH
Q 000789 1008 DSAASIFEILDSKPKIDSSKDEGMTLSSVGGAIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIAL 1087 (1283)
Q Consensus 1008 ~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~l 1087 (1283)
.+ ..++. . . .. .+..|+++|++++|. ++|+|+||+|++||++||+|+||||||||+++
T Consensus 236 ---~~-----~~~~~-~-~-~~------~~~~i~~~~l~~~~~-----~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~ 293 (491)
T PRK10982 236 ---TQ-----RFPDK-E-N-KP------GEVILEVRNLTSLRQ-----PSIRDVSFDLHKGEILGIAGLVGAKRTDIVET 293 (491)
T ss_pred ---cc-----ccccc-c-C-CC------CCcEEEEeCcccccC-----cccceeeEEEeCCcEEEEecCCCCCHHHHHHH
Confidence 00 00000 0 0 00 011489999999752 48999999999999999999999999999999
Q ss_pred HhccCCCCcceEEECCccCCCCChH-HHhcceEEEccCCC---CCh-hhHHHH-----HhcCCCC-C-CCHHHHHHHHHH
Q 000789 1088 IERFYDPDSGHVLLDNIELPKFKLS-WLRQQMGLVSQEPV---LFN-ETIRTN-----IAYGKQG-G-ATEEEIIAATEA 1155 (1283)
Q Consensus 1088 L~rl~~~~~G~I~idG~di~~~~~~-~lR~~i~~V~Qdp~---Lf~-gTIreN-----l~~g~~~-~-~sd~ei~~al~~ 1155 (1283)
|+|+.+|++|+|.+||.++...+.. .+|+.++|+||++. +|. .|+.+| +.+.... . .+.++..+
T Consensus 294 l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 369 (491)
T PRK10982 294 LFGIREKSAGTITLHGKKINNHNANEAINHGFALVTEERRSTGIYAYLDIGFNSLISNIRNYKNKVGLLDNSRMKS---- 369 (491)
T ss_pred HcCCCcCCccEEEECCEECCCCCHHHHHHCCCEEcCCchhhCCcccCCcHHHheehhhhhhhcccccccCcHHHHH----
Confidence 9999999999999999999776643 45778999999963 454 577666 3221010 1 12122111
Q ss_pred hChHHHHHhCCCCcc-cccCCCCCCCChhHHHHHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHc-CCceEEE
Q 000789 1156 SNAHNFISALPHGYE-TNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVM-VNRTTVV 1233 (1283)
Q Consensus 1156 a~l~~~I~~lp~Gld-t~vge~G~~LSgGQrQRlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~ 1233 (1283)
.+.+++..+ |+. -.......+||||||||++||||++++|+||||||||++||+.+...+.+.|+++. +++|+|+
T Consensus 370 -~~~~~l~~~--~l~~~~~~~~~~~LSgGq~qrv~la~al~~~p~illLDEPt~gLD~~~~~~~~~~l~~l~~~~~tvi~ 446 (491)
T PRK10982 370 -DTQWVIDSM--RVKTPGHRTQIGSLSGGNQQKVIIGRWLLTQPEILMLDEPTRGIDVGAKFEIYQLIAELAKKDKGIII 446 (491)
T ss_pred -HHHHHHHhc--CccCCCcccccccCCcHHHHHHHHHHHHhcCCCEEEEcCCCcccChhHHHHHHHHHHHHHHCCCEEEE
Confidence 122334443 221 11344445899999999999999999999999999999999999999999998864 5789999
Q ss_pred EecCchHHhh-cCEEEEEeCCEEEEecChHHH
Q 000789 1234 VAHRLTTIKN-ADIIAVVKNGVIAEQGSHDAL 1264 (1283)
Q Consensus 1234 IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eL 1264 (1283)
|||+++.+.. ||++++|++|+++..++.+++
T Consensus 447 vsHd~~~~~~~~d~v~~l~~g~i~~~~~~~~~ 478 (491)
T PRK10982 447 ISSEMPELLGITDRILVMSNGLVAGIVDTKTT 478 (491)
T ss_pred ECCChHHHHhhCCEEEEEECCEEEEEEccccC
Confidence 9999999876 999999999999988876543
No 86
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=1.4e-69 Score=724.18 Aligned_cols=213 Identities=21% Similarity=0.358 Sum_probs=181.9
Q ss_pred cEEEEEEEEECCCCC-CcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCC---CCcceEEECCccCCCCChHHH
Q 000789 1039 AIELRCVSFKYPTRP-DVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYD---PDSGHVLLDNIELPKFKLSWL 1114 (1283)
Q Consensus 1039 ~I~~~nVsf~Y~~~~-~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~---~~~G~I~idG~di~~~~~~~l 1114 (1283)
.++++||+++|+.++ .+++|+|||++|+|||++||+||||||||||+++|+|+.+ |++|+|.+||+++. ..+
T Consensus 759 ~l~~~nl~~~~~~~~~~~~iL~~vs~~i~~Ge~~aI~G~sGaGKSTLL~~Lag~~~~g~~~~G~I~i~G~~~~----~~~ 834 (1394)
T TIGR00956 759 IFHWRNLTYEVKIKKEKRVILNNVDGWVKPGTLTALMGASGAGKTTLLNVLAERVTTGVITGGDRLVNGRPLD----SSF 834 (1394)
T ss_pred eEEEEeeEEEecCCCCCcEeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECC----hhh
Confidence 479999999996322 3579999999999999999999999999999999999998 78899999999984 257
Q ss_pred hcceEEEccCCC-CChhhHHHHHhcCC----CCCCCHHH----HHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHH
Q 000789 1115 RQQMGLVSQEPV-LFNETIRTNIAYGK----QGGATEEE----IIAATEASNAHNFISALPHGYETNVGERGVQLSGGQK 1185 (1283)
Q Consensus 1115 R~~i~~V~Qdp~-Lf~gTIreNl~~g~----~~~~sd~e----i~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQr 1185 (1283)
|+.++||+|++. ++..||||||.++. +.+.++++ +.++++..++. +..|+.+|+.|.+||||||
T Consensus 835 ~~~i~yv~Q~~~~~~~~Tv~E~L~~~a~l~~~~~~~~~~~~~~v~~~l~~l~L~-------~~~d~~v~~~~~~LSgGqr 907 (1394)
T TIGR00956 835 QRSIGYVQQQDLHLPTSTVRESLRFSAYLRQPKSVSKSEKMEYVEEVIKLLEME-------SYADAVVGVPGEGLNVEQR 907 (1394)
T ss_pred hcceeeecccccCCCCCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCCh-------hhCCCeeCCCCCCCCHHHh
Confidence 899999999875 55789999998642 11234433 44555555543 3478999998889999999
Q ss_pred HHHHHHHHHccCCC-EEEEecccCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchHH--hhcCEEEEEeCC-EEEEecC
Q 000789 1186 QRIAIARAVLKNPK-ILLLDEATSALDAESERVVQDALERVM-VNRTTVVVAHRLTTI--KNADIIAVVKNG-VIAEQGS 1260 (1283)
Q Consensus 1186 QRlaiARAll~~p~-ILiLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHrl~ti--~~~D~I~vl~~G-~Ive~Gt 1260 (1283)
||++|||||+++|+ ||+||||||+||+.+...|++.|+++. +++|||+++|+++.. ..||++++|++| +++++|+
T Consensus 908 qRl~Ia~aL~~~P~~iLlLDEPTsgLD~~~~~~i~~~L~~la~~g~tvI~t~H~~~~~~~~~~D~vl~L~~GG~iv~~G~ 987 (1394)
T TIGR00956 908 KRLTIGVELVAKPKLLLFLDEPTSGLDSQTAWSICKLMRKLADHGQAILCTIHQPSAILFEEFDRLLLLQKGGQTVYFGD 987 (1394)
T ss_pred hHHHHHHHHHcCCCeEEEEcCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHhcCEEEEEcCCCEEEEECC
Confidence 99999999999997 999999999999999999999999874 679999999999974 569999999987 9999998
Q ss_pred hH
Q 000789 1261 HD 1262 (1283)
Q Consensus 1261 ~~ 1262 (1283)
+.
T Consensus 988 ~~ 989 (1394)
T TIGR00956 988 LG 989 (1394)
T ss_pred cc
Confidence 74
No 87
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=3.5e-70 Score=670.47 Aligned_cols=454 Identities=20% Similarity=0.263 Sum_probs=345.6
Q ss_pred cEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHHhccc
Q 000789 374 EIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWIREKI 453 (1283)
Q Consensus 374 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 453 (1283)
.|+++|++++|++ .++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.+
T Consensus 3 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~liG~nGsGKSTLl~~l~G~~~p~~G~i~~~~~~~~~~~~~~~~~~i 79 (490)
T PRK10938 3 SLQISQGTFRLSD---TKTLQLPSLTLNAGDSWAFVGANGSGKSALARALAGELPLLSGERQSQFSHITRLSFEQLQKLV 79 (490)
T ss_pred eEEEEeEEEEcCC---eeecccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCceEEECCcccccCCHHHHHHHh
Confidence 3899999999963 3599999999999999999999999999999999999999999999999888776666677789
Q ss_pred EEEccCCCC--C-------cccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHH
Q 000789 454 GLVSQEPIL--F-------ATSLRENIAYGKENATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAI 524 (1283)
Q Consensus 454 ~~v~Q~~~l--~-------~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriai 524 (1283)
+|++|++.+ + ..|+++|+.++. ...+++.+ .++.+ |++........+||||||||++|
T Consensus 80 ~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~---------~l~~~--~l~~~~~~~~~~LSgG~~qrv~l 146 (490)
T PRK10938 80 SDEWQRNNTDMLSPGEDDTGRTTAEIIQDEV--KDPARCEQ---------LAQQF--GITALLDRRFKYLSTGETRKTLL 146 (490)
T ss_pred ceeccCcchhhcccchhhccccHHHhcccch--hHHHHHHH---------HHHHc--CCHhhhhCCcccCCHHHHHHHHH
Confidence 999998753 2 358899886541 11223333 33444 55544556678999999999999
Q ss_pred HHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC-CCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHHhcCC
Q 000789 525 ARAILKNPKILLLDEATSALDAESERIVQDALVKIMT-SRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDELIKDP 602 (1283)
Q Consensus 525 ARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~-~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~~ 602 (1283)
||||+.+|++|||||||++||+.+.+.+.+.|+++.+ ++|+|+|||+++.+.. ||+|++|++|+++..|+++++....
T Consensus 147 a~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~ 226 (490)
T PRK10938 147 CQALMSEPDLLILDEPFDGLDVASRQQLAELLASLHQSGITLVLVLNRFDEIPDFVQFAGVLADCTLAETGEREEILQQA 226 (490)
T ss_pred HHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEeCCHHHHhcch
Confidence 9999999999999999999999999999999998754 6899999999999876 9999999999999988776654320
Q ss_pred CChhHHHHHHhhcCchhhhhhhccccccCchhhhhhhhhcCCCCCCccccccccccCCCCCCccccccCCCCCCCccccc
Q 000789 603 EGPYTQLVRLQEGSKEAEDALATDADKLDSSFDILDKAMTRSGSRGESMRRSISRHSSGSRHSFGFTYGVPGPINVFETE 682 (1283)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 682 (1283)
....+.. . .
T Consensus 227 --~~~~~~~-------~-----------~--------------------------------------------------- 235 (490)
T PRK10938 227 --LVAQLAH-------S-----------E--------------------------------------------------- 235 (490)
T ss_pred --hhhhhhh-------h-----------h---------------------------------------------------
Confidence 0000000 0 0
Q ss_pred cCCCCCCCCchhhHhhhhhHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhhhhHHHHH
Q 000789 683 EGDQGGAERTPLMIEKRQKLSMRRLAYLNKPEFPVLLIGSIAAGIHGVIFPIFGLLLSSSIRMFFEPEDKLRKDSRFWAL 762 (1283)
Q Consensus 683 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 762 (1283)
.
T Consensus 236 -~------------------------------------------------------------------------------ 236 (490)
T PRK10938 236 -Q------------------------------------------------------------------------------ 236 (490)
T ss_pred -c------------------------------------------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChhHHHHHHhhhHHHHHHHHHHHHHHHH
Q 000789 763 IYLVLGIINLIAVPFQNYFFGVAGGKLIRRIRSLTFEKVVHQEISWFDDPANSSGSVGARLSTDASTIRSLVGDSLALVV 842 (1283)
Q Consensus 763 ~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~ff~~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~ 842 (1283)
+ ... ..+.
T Consensus 237 --------------------------------------~-------~~~-~~~~-------------------------- 244 (490)
T PRK10938 237 --------------------------------------L-------EGV-QLPE-------------------------- 244 (490)
T ss_pred --------------------------------------c-------Ccc-ccCc--------------------------
Confidence 0 000 0000
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHH
Q 000789 843 QNIATIAAGLIIAFTANWILAFVILAVSPLMLVQGYTQTKFMKGFSADAKLMYEEASQVANDAVGSIRTVASFCSEEKVM 922 (1283)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~ 922 (1283)
T Consensus 245 -------------------------------------------------------------------------------- 244 (490)
T PRK10938 245 -------------------------------------------------------------------------------- 244 (490)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHhcHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 923 DLYEKKCEGPLKNGVRRGILSGAGFGFSFLVLYCTNAFCFYIGSVLVEHGKATFGQVFKVFFALTISALGVSQTSAMAPD 1002 (1283)
Q Consensus 923 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1002 (1283)
T Consensus 245 -------------------------------------------------------------------------------- 244 (490)
T PRK10938 245 -------------------------------------------------------------------------------- 244 (490)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHhccCCCCCCCCCcCCccCCCcccEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHH
Q 000789 1003 TTKAKDSAASIFEILDSKPKIDSSKDEGMTLSSVGGAIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKS 1082 (1283)
Q Consensus 1003 ~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKS 1082 (1283)
..++....... .....|+++|++++|++ ..+|+|+||+|++||++||+||||||||
T Consensus 245 ---------------~~~~~~~~~~~------~~~~~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~i~G~NGsGKS 300 (490)
T PRK10938 245 ---------------PDEPSARHALP------ANEPRIVLNNGVVSYND---RPILHNLSWQVNPGEHWQIVGPNGAGKS 300 (490)
T ss_pred ---------------ccccccccccC------CCCceEEEeceEEEECC---eeEEeeceEEEcCCCEEEEECCCCCCHH
Confidence 00000000000 00124999999999974 3599999999999999999999999999
Q ss_pred HHHHHHhccCCC-CcceEEECCccCCC-CChHHHhcceEEEccCCCCCh---hhHHHHHhcCCC------CCCC---HHH
Q 000789 1083 TVIALIERFYDP-DSGHVLLDNIELPK-FKLSWLRQQMGLVSQEPVLFN---ETIRTNIAYGKQ------GGAT---EEE 1148 (1283)
Q Consensus 1083 TL~~lL~rl~~~-~~G~I~idG~di~~-~~~~~lR~~i~~V~Qdp~Lf~---gTIreNl~~g~~------~~~s---d~e 1148 (1283)
||+++|+|+.+| ++|+|.++|.++.. .+...+|++|+|++|++.++. .|+++++.++.. .... +++
T Consensus 301 TLl~~l~G~~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (490)
T PRK10938 301 TLLSLITGDHPQGYSNDLTLFGRRRGSGETIWDIKKHIGYVSSSLHLDYRVSTSVRNVILSGFFDSIGIYQAVSDRQQKL 380 (490)
T ss_pred HHHHHHcCCCCcccCCeEEEecccCCCCCCHHHHHhhceEECHHHHhhcccCCcHHHHHHhccccccccccCCCHHHHHH
Confidence 999999998876 69999999987632 233456889999999986642 467777653211 0111 233
Q ss_pred HHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcC-
Q 000789 1149 IIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMV- 1227 (1283)
Q Consensus 1149 i~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~- 1227 (1283)
+.++++..++.+. ........||||||||++|||||+++|+||||||||++||+++.+.+.+.|+++.+
T Consensus 381 ~~~~l~~~~l~~~----------~~~~~~~~LSgGq~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~L~~l~~~ 450 (490)
T PRK10938 381 AQQWLDILGIDKR----------TADAPFHSLSWGQQRLALIVRALVKHPTLLILDEPLQGLDPLNRQLVRRFVDVLISE 450 (490)
T ss_pred HHHHHHHcCCchh----------hccCchhhCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhc
Confidence 4555555554320 22233457999999999999999999999999999999999999999999998753
Q ss_pred C-ceEEEEecCchHHhh--cCEEEEEeCCEEEEec
Q 000789 1228 N-RTTVVVAHRLTTIKN--ADIIAVVKNGVIAEQG 1259 (1283)
Q Consensus 1228 ~-~TvI~IaHrl~ti~~--~D~I~vl~~G~Ive~G 1259 (1283)
+ .|+|+|||+++.+.. ||++++|++|+|++.-
T Consensus 451 ~~~tviivsHd~~~~~~~~~d~v~~l~~G~i~~~~ 485 (490)
T PRK10938 451 GETQLLFVSHHAEDAPACITHRLEFVPDGDIYRYV 485 (490)
T ss_pred CCcEEEEEecchhhhhhhhheeEEEecCCceEEee
Confidence 3 469999999999964 8999999999998764
No 88
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-69 Score=669.37 Aligned_cols=482 Identities=23% Similarity=0.374 Sum_probs=346.7
Q ss_pred EEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHHhcccE
Q 000789 375 IELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWIREKIG 454 (1283)
Q Consensus 375 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 454 (1283)
|+++|++++|++ .++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|. .+|+
T Consensus 2 l~i~~ls~~~~~---~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~~~-----------~~i~ 67 (530)
T PRK15064 2 LSTANITMQFGA---KPLFENISVKFGGGNRYGLIGANGCGKSTFMKILGGDLEPSAGNVSLDPN-----------ERLG 67 (530)
T ss_pred EEEEEEEEEeCC---cEeEeCCEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCC-----------CEEE
Confidence 789999999963 36999999999999999999999999999999999999999999999973 3699
Q ss_pred EEccCCCCCcc-cHHHHHhcCCCCC----------------CHH---HHHHH----------HHHhcHHHHHHhCCCCcc
Q 000789 455 LVSQEPILFAT-SLRENIAYGKENA----------------TDQ---EIRTA----------IELANAAKFIDKLPKGLD 504 (1283)
Q Consensus 455 ~v~Q~~~l~~~-ti~~ni~~~~~~~----------------~~~---~~~~~----------~~~~~~~~~i~~lp~g~~ 504 (1283)
|++|++.+|.. |++||+.++.... ..+ .+.+. .....+.+.++.+ |++
T Consensus 68 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--gl~ 145 (530)
T PRK15064 68 KLRQDQFAFEEFTVLDTVIMGHTELWEVKQERDRIYALPEMSEEDGMKVADLEVKFAEMDGYTAEARAGELLLGV--GIP 145 (530)
T ss_pred EEeccCCcCCCCcHHHHHHHhhHHHHHHHHHHHHHhcccccccchHHHHHHHHHHHHhcCchhHHHHHHHHHHhC--CCC
Confidence 99999988765 9999998753100 000 00000 0112344556666 665
Q ss_pred ccc-cCCCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhc-cCEEE
Q 000789 505 TMA-GEHGTQLSGGQKQRIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMTSRTTVVVAHRLTTIRN-ADLIA 582 (1283)
Q Consensus 505 t~~-~~~g~~LSgGqkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~ 582 (1283)
... .....+||||||||++|||||+.+|++|||||||++||+++...+.+.|.+ .+.|+|+|||+++.+.. ||+|+
T Consensus 146 ~~~~~~~~~~LSgGq~qrv~lA~aL~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~--~~~tiiivsHd~~~~~~~~d~i~ 223 (530)
T PRK15064 146 EEQHYGLMSEVAPGWKLRVLLAQALFSNPDILLLDEPTNNLDINTIRWLEDVLNE--RNSTMIIISHDRHFLNSVCTHMA 223 (530)
T ss_pred hhHhcCchhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHHh--CCCeEEEEeCCHHHHHhhcceEE
Confidence 433 345689999999999999999999999999999999999999999999975 47899999999999876 99999
Q ss_pred EEeCCEEe-EecChhHHhcCCCChhHHHHHHhhcCchhhhhhhccccccCchhhhhhhhhcCCCCCCccccccccccCCC
Q 000789 583 VVHQGKIV-EKGTHDELIKDPEGPYTQLVRLQEGSKEAEDALATDADKLDSSFDILDKAMTRSGSRGESMRRSISRHSSG 661 (1283)
Q Consensus 583 vl~~G~i~-~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 661 (1283)
+|++|+++ +.|+++++++.....+... ..+ .+
T Consensus 224 ~l~~g~i~~~~g~~~~~~~~~~~~~~~~---------~~~-----~~--------------------------------- 256 (530)
T PRK15064 224 DLDYGELRVYPGNYDEYMTAATQARERL---------LAD-----NA--------------------------------- 256 (530)
T ss_pred EEeCCEEEEecCCHHHHHHHHHHHHHHH---------HHH-----HH---------------------------------
Confidence 99999994 7888877653200000000 000 00
Q ss_pred CCCccccccCCCCCCCccccccCCCCCCCCchhhHhhhhhHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 662 SRHSFGFTYGVPGPINVFETEEGDQGGAERTPLMIEKRQKLSMRRLAYLNKPEFPVLLIGSIAAGIHGVIFPIFGLLLSS 741 (1283)
Q Consensus 662 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 741 (1283)
... ...+....
T Consensus 257 ----------------------------------~~~---~~~~~~~~-------------------------------- 267 (530)
T PRK15064 257 ----------------------------------KKK---AQIAELQS-------------------------------- 267 (530)
T ss_pred ----------------------------------HHH---HHHHHHHH--------------------------------
Confidence 000 00000000
Q ss_pred HHHHhcCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChhHHHH
Q 000789 742 SIRMFFEPEDKLRKDSRFWALIYLVLGIINLIAVPFQNYFFGVAGGKLIRRIRSLTFEKVVHQEISWFDDPANSSGSVGA 821 (1283)
Q Consensus 742 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~ff~~~~~~~G~l~~ 821 (1283)
+ ..+. . ..
T Consensus 268 ------------------~-------------------------------------~~~~--------~--~~------- 275 (530)
T PRK15064 268 ------------------F-------------------------------------VSRF--------S--AN------- 275 (530)
T ss_pred ------------------H-------------------------------------HHHh--------h--cc-------
Confidence 0 0000 0 00
Q ss_pred HHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Q 000789 822 RLSTDASTIRSLVGDSLALVVQNIATIAAGLIIAFTANWILAFVILAVSPLMLVQGYTQTKFMKGFSADAKLMYEEASQV 901 (1283)
Q Consensus 822 rl~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 901 (1283)
....
T Consensus 276 ------------------------------------------------------------------~~~~---------- 279 (530)
T PRK15064 276 ------------------------------------------------------------------ASKA---------- 279 (530)
T ss_pred ------------------------------------------------------------------chhh----------
Confidence 0000
Q ss_pred HHHHHhhhHHHHHhccHHHHHHHHHHHHhcHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHH
Q 000789 902 ANDAVGSIRTVASFCSEEKVMDLYEKKCEGPLKNGVRRGILSGAGFGFSFLVLYCTNAFCFYIGSVLVEHGKATFGQVFK 981 (1283)
Q Consensus 902 ~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~g~~~~~~~~~ 981 (1283)
...
T Consensus 280 -------------------------------~~~---------------------------------------------- 282 (530)
T PRK15064 280 -------------------------------KQA---------------------------------------------- 282 (530)
T ss_pred -------------------------------HHH----------------------------------------------
Confidence 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hccCCC-CCCCCCc-CCccCCCcccEEEEEEEEECCCCCCccc
Q 000789 982 VFFALTISALGVSQTSAMAPDTTKAKDSAASIFEI--LDSKPK-IDSSKDE-GMTLSSVGGAIELRCVSFKYPTRPDVQI 1057 (1283)
Q Consensus 982 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~--~~~~~~-~~~~~~~-~~~~~~~~g~I~~~nVsf~Y~~~~~~~v 1057 (1283)
.....++.+. ...++. ....... .......+..|+++||+++|++ .++
T Consensus 283 -------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~---~~~ 334 (530)
T PRK15064 283 -------------------------TSRAKQIDKIKLEEVKPSSRQNPFIRFEQDKKLHRNALEVENLTKGFDN---GPL 334 (530)
T ss_pred -------------------------HHHHHHHhhccccccCCccccCceeeCCCCCCCCCceEEEEeeEEeeCC---cee
Confidence 0000000000 000000 0000000 0000001236999999999974 359
Q ss_pred ccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHhcceEEEccCCC--CC-hhhHHH
Q 000789 1058 FRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMGLVSQEPV--LF-NETIRT 1134 (1283)
Q Consensus 1058 L~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qdp~--Lf-~gTIre 1134 (1283)
|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|. ++++||||++. ++ ..|+++
T Consensus 335 l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p~~G~i~~~~~-----------~~i~~~~q~~~~~~~~~~t~~~ 403 (530)
T PRK15064 335 FKNLNLLLEAGERLAIIGENGVGKTTLLRTLVGELEPDSGTVKWSEN-----------ANIGYYAQDHAYDFENDLTLFD 403 (530)
T ss_pred ecCcEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCc-----------eEEEEEcccccccCCCCCcHHH
Confidence 99999999999999999999999999999999999999999999873 57999999974 44 369999
Q ss_pred HHhcCCCCCCCHHHHHHHHHHhChH-HHHHhCCCCcccccCCCCCCCChhHHHHHHHHHHHccCCCEEEEecccCCCCHH
Q 000789 1135 NIAYGKQGGATEEEIIAATEASNAH-NFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAE 1213 (1283)
Q Consensus 1135 Nl~~g~~~~~sd~ei~~al~~a~l~-~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiARAll~~p~ILiLDEaTSaLD~~ 1213 (1283)
|+.+.......++++.+.++..++. +.. + ....+||||||||++||||++++|+||||||||++||+.
T Consensus 404 ~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~----~~~~~LSgGq~qrv~la~al~~~p~lllLDEPt~~LD~~ 472 (530)
T PRK15064 404 WMSQWRQEGDDEQAVRGTLGRLLFSQDDI-------K----KSVKVLSGGEKGRMLFGKLMMQKPNVLVMDEPTNHMDME 472 (530)
T ss_pred HHHHhccCCccHHHHHHHHHHcCCChhHh-------c----CcccccCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHH
Confidence 9864211123355677777776652 222 2 234589999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCceEEEEecCchHHhh-cCEEEEEeCCEEE-EecChHHHHhc
Q 000789 1214 SERVVQDALERVMVNRTTVVVAHRLTTIKN-ADIIAVVKNGVIA-EQGSHDALMKI 1267 (1283)
Q Consensus 1214 te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Iv-e~Gt~~eLl~~ 1267 (1283)
+...+.+.|++. ++|+|+|||+++.+.. ||+|++|++|+++ +.|+++++++.
T Consensus 473 ~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i~~l~~g~i~~~~g~~~~~~~~ 526 (530)
T PRK15064 473 SIESLNMALEKY--EGTLIFVSHDREFVSSLATRIIEITPDGVVDFSGTYEEYLRS 526 (530)
T ss_pred HHHHHHHHHHHC--CCEEEEEeCCHHHHHHhCCEEEEEECCeEEEcCCCHHHHHHH
Confidence 999999999986 5699999999999876 9999999999998 78999998874
No 89
>PRK10522 multidrug transporter membrane component/ATP-binding component; Provisional
Probab=100.00 E-value=6.8e-67 Score=648.82 Aligned_cols=522 Identities=18% Similarity=0.188 Sum_probs=400.1
Q ss_pred HhhchhhHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 43 AFADKQDAVLMIVGTISAIGSGLAHPF-MTLIFGHLINSFGSSDRSHVVHEVSKVAVKFLYLAAGTGIAAFLQVSCWMVT 121 (1283)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (1283)
++.+++++ .++++++++++..++... .|++.+.++|.... .. ..+. .++++.++..++.+++.++..+.
T Consensus 6 ~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~i~~~lid~~~~-~~----~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 75 (547)
T PRK10522 6 LVWRQYRW-PFISVMALSLASAALGIGLIAFINQRLIETADT-SL----LVLP----EFLGLLLLLMAVTLGSQLALTTL 75 (547)
T ss_pred HHHHhhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc-cc----hHHH----HHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444433 344555555666665554 46677888886532 11 1111 11112222344667788888889
Q ss_pred HHHHHHHHHHHHHHHHHhCChhhHhccCCccHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Q 000789 122 GERQATRIRGLYLKTILRQDIGFFDTETTTGEVIGRMSGDTILIQEAMGEKVGKFIQLMSTFFGGFVVALARGWFLALVL 201 (1283)
Q Consensus 122 ~~~~~~~lR~~~~~~ll~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~l~~ 201 (1283)
+.++..++|.+++++++++|+++|+++ ++|++++|+++|++.+...+. .++.++..++.+++.++++++++|.+++++
T Consensus 76 ~~~~~~~lR~~l~~~ll~~~~~~~~~~-~~g~~lsrl~~dv~~i~~~~~-~l~~~~~~~~~~i~~~~~l~~~~~~l~li~ 153 (547)
T PRK10522 76 GHHFVYRLRSEFIKRILDTHVERIEQL-GSASLLASLTSDVRNITIAFV-RLPELVQGIILTLGSAAYLAWLSPKMLLVT 153 (547)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHhcc-CccchHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 999999999999999999999999986 999999999999999998765 467788888888889999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccH---HHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 202 LACLPAIVIAGGSMALIMSKMSSRGQIAYSEAGTVVEQTVSGIRTVSSFTGE---KQAIEKYNNKLQVAYRAAVQQGMVS 278 (1283)
Q Consensus 202 l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e---~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (1283)
++++|+.+++..++.++.++..++.++..++.++.+.|.++|+++++ ++.+ +.+.++|++..++..+...+.....
T Consensus 154 l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (547)
T PRK10522 154 AIWMAVTIWGGFVLVARVYKHMATLRETEDKLYNDYQTVLEGRKELT-LNRERAEYVFENEYEPDAQEYRHHIIRADTFH 232 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhh-ccHHHHHHHHHHHHhHHHHHHHhhhHHHHHHH
Confidence 99999988888888999888888889999999999999999999996 4443 4567788887777776666555444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCC
Q 000789 279 GIGLGVLMLTVIGTYGLAVWYGSKLIIEKGYNGGTVINVIMAIMTGGMSLGQTSPCLNAFAGGQAAAYKMFETIKRKPKI 358 (1283)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~t~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~ 358 (1283)
.....+..++......+.+++++... .+ +.+.+..+.++.+....|+..+...+..++.+..+.+|+.++++.+++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~l~~~~~~~ 309 (547)
T PRK10522 233 LSAVNWSNIMMLGAIGLVFYMANSLG-WA--DTNVAATYSLTLLFLRTPLLSAVGALPTLLSAQVAFNKLNKLALAPYKA 309 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhh-cC--ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 44333332222222233333333221 12 3333333334444456799999999999999999999999987644322
Q ss_pred CCCCCCCCcccCccccEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECC
Q 000789 359 DPYDTSGITLEKIEGEIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDG 438 (1283)
Q Consensus 359 ~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g 438 (1283)
+... .... +..+.|+++||+|+|+++ .++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|.+||
T Consensus 310 ~~~~--~~~~-~~~~~i~~~~v~f~y~~~--~~~l~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g 384 (547)
T PRK10522 310 EFPR--PQAF-PDWQTLELRNVTFAYQDN--GFSVGPINLTIKRGELLFLIGGNGSGKSTLAMLLTGLYQPQSGEILLDG 384 (547)
T ss_pred cccc--cccc-CcCceEEEEEEEEEeCCC--CeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECC
Confidence 1111 1111 113579999999999742 3699999999999999999999999999999999999999999999999
Q ss_pred cccCCCCHHHHhcccEEEccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHH
Q 000789 439 IDIKKLQLKWIREKIGLVSQEPILFATSLRENIAYGKENATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQ 518 (1283)
Q Consensus 439 ~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGq 518 (1283)
+|+++++.+++|++|+||+||+++|++|+++| + ++.++++++++++..++.+++.. |+|. .+|.+|||||
T Consensus 385 ~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~n---~-~~~~~~~~~~~~~~~~l~~~~~~-~~~~-----~~G~~LSgGq 454 (547)
T PRK10522 385 KPVTAEQPEDYRKLFSAVFTDFHLFDQLLGPE---G-KPANPALVEKWLERLKMAHKLEL-EDGR-----ISNLKLSKGQ 454 (547)
T ss_pred EECCCCCHHHHhhheEEEecChhHHHHhhccc---c-CchHHHHHHHHHHHcCCchhhhc-cccC-----CCCCCCCHHH
Confidence 99999999999999999999999999999999 2 34566666666666655544432 3221 1478999999
Q ss_pred HHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc--CCCeEEEEecCchhhhccCEEEEEeCCEEeEe-cCh
Q 000789 519 KQRIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIM--TSRTTVVVAHRLTTIRNADLIAVVHQGKIVEK-GTH 595 (1283)
Q Consensus 519 kqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~-g~~ 595 (1283)
|||++||||++++|+|||||||||+||+++++.+.+.+.+.. +++|+|+||||+++++.||+|++|++|+++|. |++
T Consensus 455 ~qRl~lARal~~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~e~~~~~ 534 (547)
T PRK10522 455 KKRLALLLALAEERDILLLDEWAADQDPHFRREFYQVLLPLLQEMGKTIFAISHDDHYFIHADRLLEMRNGQLSELTGEE 534 (547)
T ss_pred HHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEEechHHHHhCCEEEEEECCEEEEecCCc
Confidence 999999999999999999999999999999999999987654 47999999999999999999999999999986 443
No 90
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=3.4e-67 Score=650.71 Aligned_cols=484 Identities=25% Similarity=0.336 Sum_probs=340.1
Q ss_pred cEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHHhccc
Q 000789 374 EIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWIREKI 453 (1283)
Q Consensus 374 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 453 (1283)
.|+++||+++|++ ++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.+++ +.+|
T Consensus 6 ~l~i~~l~~~y~~--~~~il~~vs~~i~~Ge~~~iiG~NGsGKSTLlk~i~G~~~p~~G~i~~~~-----------~~~i 72 (556)
T PRK11819 6 IYTMNRVSKVVPP--KKQILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFEGEARPAP-----------GIKV 72 (556)
T ss_pred EEEEeeEEEEeCC--CCeeeeCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecC-----------CCEE
Confidence 5899999999962 24699999999999999999999999999999999999999999999975 2469
Q ss_pred EEEccCCCCCcc-cHHHHHhcCCCC----------------CCH----------HHHHHHHHH-------hcHHHHHHhC
Q 000789 454 GLVSQEPILFAT-SLRENIAYGKEN----------------ATD----------QEIRTAIEL-------ANAAKFIDKL 499 (1283)
Q Consensus 454 ~~v~Q~~~l~~~-ti~~ni~~~~~~----------------~~~----------~~~~~~~~~-------~~~~~~i~~l 499 (1283)
|||+|+|.+++. |+.||+.++... ... .++.+.++. ..+.+.++.+
T Consensus 73 ~~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 152 (556)
T PRK11819 73 GYLPQEPQLDPEKTVRENVEEGVAEVKAALDRFNEIYAAYAEPDADFDALAAEQGELQEIIDAADAWDLDSQLEIAMDAL 152 (556)
T ss_pred EEEecCCCCCCCCcHHHHHHHhhHHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHHHHHHHhcCccchHHHHHHHHHhC
Confidence 999999999875 999999875310 000 011111111 1233445554
Q ss_pred CCCccccccCCCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhc-c
Q 000789 500 PKGLDTMAGEHGTQLSGGQKQRIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMTSRTTVVVAHRLTTIRN-A 578 (1283)
Q Consensus 500 p~g~~t~~~~~g~~LSgGqkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~ 578 (1283)
|++ .......+||||||||++|||||+.+|++|||||||++||+.+...+.+.|+++. .|+|+|||+++.+.. |
T Consensus 153 --gl~-~~~~~~~~LSgGqkqrv~la~al~~~p~vlLLDEPt~~LD~~~~~~l~~~L~~~~--~tviiisHd~~~~~~~~ 227 (556)
T PRK11819 153 --RCP-PWDAKVTKLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVAWLEQFLHDYP--GTVVAVTHDRYFLDNVA 227 (556)
T ss_pred --CCC-cccCchhhcCHHHHHHHHHHHHHhCCCCEEEEcCCCCcCChHHHHHHHHHHHhCC--CeEEEEeCCHHHHHhhc
Confidence 553 2466778999999999999999999999999999999999999999999998863 599999999999976 9
Q ss_pred CEEEEEeCCEEe-EecChhHHhcCCCChhHHHHHHhhcCchhhhhhhccccccCchhhhhhhhhcCCCCCCccccccccc
Q 000789 579 DLIAVVHQGKIV-EKGTHDELIKDPEGPYTQLVRLQEGSKEAEDALATDADKLDSSFDILDKAMTRSGSRGESMRRSISR 657 (1283)
Q Consensus 579 d~i~vl~~G~i~-~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 657 (1283)
|+|++|++|+++ ..|+++++.+.. ..+. ..... .
T Consensus 228 d~i~~l~~g~i~~~~g~~~~~~~~~--------~~~~--~~~~~--------------~--------------------- 262 (556)
T PRK11819 228 GWILELDRGRGIPWEGNYSSWLEQK--------AKRL--AQEEK--------------Q--------------------- 262 (556)
T ss_pred CeEEEEeCCEEEEecCCHHHHHHHH--------HHHH--HHHHH--------------H---------------------
Confidence 999999999986 677777654320 0000 00000 0
Q ss_pred cCCCCCCccccccCCCCCCCccccccCCCCCCCCchhhHhhhhhHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHH
Q 000789 658 HSSGSRHSFGFTYGVPGPINVFETEEGDQGGAERTPLMIEKRQKLSMRRLAYLNKPEFPVLLIGSIAAGIHGVIFPIFGL 737 (1283)
Q Consensus 658 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 737 (1283)
.+.. ...+.+..
T Consensus 263 --------------------------------------~~~~-~~~~~~~~----------------------------- 274 (556)
T PRK11819 263 --------------------------------------EAAR-QKALKREL----------------------------- 274 (556)
T ss_pred --------------------------------------HHHH-HHHHHHHH-----------------------------
Confidence 0000 00000000
Q ss_pred HHHHHHHHhcCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChh
Q 000789 738 LLSSSIRMFFEPEDKLRKDSRFWALIYLVLGIINLIAVPFQNYFFGVAGGKLIRRIRSLTFEKVVHQEISWFDDPANSSG 817 (1283)
Q Consensus 738 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~ff~~~~~~~G 817 (1283)
.|.+. .+.+
T Consensus 275 ---------------------------------------------------------------------~~~~~--~~~~ 283 (556)
T PRK11819 275 ---------------------------------------------------------------------EWVRQ--SPKA 283 (556)
T ss_pred ---------------------------------------------------------------------HHHHH--hhhh
Confidence 00000 0000
Q ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Q 000789 818 SVGARLSTDASTIRSLVGDSLALVVQNIATIAAGLIIAFTANWILAFVILAVSPLMLVQGYTQTKFMKGFSADAKLMYEE 897 (1283)
Q Consensus 818 ~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~ 897 (1283)
+ . .
T Consensus 284 ----------------------------------------------------------------~---~-~--------- 286 (556)
T PRK11819 284 ----------------------------------------------------------------R---Q-A--------- 286 (556)
T ss_pred ----------------------------------------------------------------h---H-H---------
Confidence 0 0 0
Q ss_pred HHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHhcHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHH
Q 000789 898 ASQVANDAVGSIRTVASFCSEEKVMDLYEKKCEGPLKNGVRRGILSGAGFGFSFLVLYCTNAFCFYIGSVLVEHGKATFG 977 (1283)
Q Consensus 898 ~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~g~~~~~ 977 (1283)
+. +.
T Consensus 287 -----------------------------~~-----~~------------------------------------------ 290 (556)
T PRK11819 287 -----------------------------KS-----KA------------------------------------------ 290 (556)
T ss_pred -----------------------------HH-----HH------------------------------------------
Confidence 00 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccCCCCCCCCCcCCccCCCcccEEEEEEEEECCCCCCcc
Q 000789 978 QVFKVFFALTISALGVSQTSAMAPDTTKAKDSAASIFEIL-DSKPKIDSSKDEGMTLSSVGGAIELRCVSFKYPTRPDVQ 1056 (1283)
Q Consensus 978 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~-~~~~~~~~~~~~~~~~~~~~g~I~~~nVsf~Y~~~~~~~ 1056 (1283)
.....++..+.. ...++........ .....+..|+++||+++|++ .+
T Consensus 291 ----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~l~~~~~~---~~ 338 (556)
T PRK11819 291 ----------------------------RLARYEELLSEEYQKRNETNEIFIPP-GPRLGDKVIEAENLSKSFGD---RL 338 (556)
T ss_pred ----------------------------HHHHHHHhhcccccccCCCceeecCC-CCCCCCeEEEEEeEEEEECC---ee
Confidence 000000000000 0000000000000 00011235999999999974 35
Q ss_pred cccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHhcceEEEccCC-CCC-hhhHHH
Q 000789 1057 IFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMGLVSQEP-VLF-NETIRT 1134 (1283)
Q Consensus 1057 vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qdp-~Lf-~gTIre 1134 (1283)
+|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+++ ++ +|+||||++ .++ +.|++|
T Consensus 339 ~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p~~G~i~~~~-~~----------~i~~v~q~~~~~~~~~tv~e 407 (556)
T PRK11819 339 LIDDLSFSLPPGGIVGIIGPNGAGKSTLFKMITGQEQPDSGTIKIGE-TV----------KLAYVDQSRDALDPNKTVWE 407 (556)
T ss_pred eecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECC-ce----------EEEEEeCchhhcCCCCCHHH
Confidence 99999999999999999999999999999999999999999999954 21 599999997 555 459999
Q ss_pred HHhcCCC-CC--CCHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHHHHHccCCCEEEEecccCCCC
Q 000789 1135 NIAYGKQ-GG--ATEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALD 1211 (1283)
Q Consensus 1135 Nl~~g~~-~~--~sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiARAll~~p~ILiLDEaTSaLD 1211 (1283)
|+.++.. .. ..+.+..++++..++.+. ........||||||||++||||++.+|++|||||||++||
T Consensus 408 ~l~~~~~~~~~~~~~~~~~~~l~~~~l~~~----------~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD 477 (556)
T PRK11819 408 EISGGLDIIKVGNREIPSRAYVGRFNFKGG----------DQQKKVGVLSGGERNRLHLAKTLKQGGNVLLLDEPTNDLD 477 (556)
T ss_pred HHHhhcccccccccHHHHHHHHHhCCCChh----------HhcCchhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCC
Confidence 9986521 01 112333444444443210 1223345799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHcCCceEEEEecCchHHhh-cCEEEEEeC-CEEEE-ecChHHHHhc
Q 000789 1212 AESERVVQDALERVMVNRTTVVVAHRLTTIKN-ADIIAVVKN-GVIAE-QGSHDALMKI 1267 (1283)
Q Consensus 1212 ~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~D~I~vl~~-G~Ive-~Gt~~eLl~~ 1267 (1283)
+.+...+.+.|++. . .|+|+|||+++.+.. ||+|++|++ |++.+ .|+++++++.
T Consensus 478 ~~~~~~l~~~l~~~-~-~tvi~vtHd~~~~~~~~d~i~~l~~~g~~~~~~g~~~~~~~~ 534 (556)
T PRK11819 478 VETLRALEEALLEF-P-GCAVVISHDRWFLDRIATHILAFEGDSQVEWFEGNFQEYEED 534 (556)
T ss_pred HHHHHHHHHHHHhC-C-CeEEEEECCHHHHHHhCCEEEEEECCCeEEEecCCHHHHHHH
Confidence 99999999999986 3 499999999999876 999999986 88874 7898888764
No 91
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=100.00 E-value=2e-66 Score=643.95 Aligned_cols=484 Identities=25% Similarity=0.357 Sum_probs=339.7
Q ss_pred cEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHHhccc
Q 000789 374 EIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWIREKI 453 (1283)
Q Consensus 374 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 453 (1283)
-|+++|++++|++ ++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.+++ +..|
T Consensus 4 ~i~~~nls~~~~~--~~~il~~is~~i~~Ge~~~liG~NGsGKSTLl~~i~G~~~p~~G~i~~~~-----------~~~i 70 (552)
T TIGR03719 4 IYTMNRVSKVVPP--KKEILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFNGEARPAP-----------GIKV 70 (552)
T ss_pred EEEEeeEEEecCC--CCeeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecC-----------CCEE
Confidence 4899999999962 23699999999999999999999999999999999999999999999975 2479
Q ss_pred EEEccCCCCCcc-cHHHHHhcCCCC-----------------CCH---------HHHHHHHHHhcH-------HHHHHhC
Q 000789 454 GLVSQEPILFAT-SLRENIAYGKEN-----------------ATD---------QEIRTAIELANA-------AKFIDKL 499 (1283)
Q Consensus 454 ~~v~Q~~~l~~~-ti~~ni~~~~~~-----------------~~~---------~~~~~~~~~~~~-------~~~i~~l 499 (1283)
|||+|+|.+++. |++||+.++... ..+ .++.++++.++. .+.++.+
T Consensus 71 ~~v~Q~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 150 (552)
T TIGR03719 71 GYLPQEPQLDPTKTVRENVEEGVAEIKDALDRFNEISAKFAEPDADMDALLAEQAELQEIIDAADAWDLDRKLEIAMDAL 150 (552)
T ss_pred EEEeccCCCCCCCcHHHHHHHhhHHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHHHHHHHhcCcchhHHHHHHHHhhC
Confidence 999999998865 999999875310 001 123333333332 2344444
Q ss_pred CCCccccccCCCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhc-c
Q 000789 500 PKGLDTMAGEHGTQLSGGQKQRIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMTSRTTVVVAHRLTTIRN-A 578 (1283)
Q Consensus 500 p~g~~t~~~~~g~~LSgGqkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~ 578 (1283)
|++. ......+||||||||++|||||+.+|++|||||||++||+.+...+.+.|.+. ++|+|+|||+++.+.. |
T Consensus 151 --~l~~-~~~~~~~LSgGqkqrv~la~al~~~p~lLLLDEPt~~LD~~~~~~l~~~L~~~--~~tvIiisHd~~~~~~~~ 225 (552)
T TIGR03719 151 --RCPP-WDADVTKLSGGERRRVALCRLLLSKPDMLLLDEPTNHLDAESVAWLEQHLQEY--PGTVVAVTHDRYFLDNVA 225 (552)
T ss_pred --CCCc-ccCchhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCChHHHHHHHHHHHhC--CCeEEEEeCCHHHHHhhc
Confidence 4532 45667899999999999999999999999999999999999999999999876 3699999999999976 9
Q ss_pred CEEEEEeCCEEe-EecChhHHhcCCCChhHHHHHHhhcCchhhhhhhccccccCchhhhhhhhhcCCCCCCccccccccc
Q 000789 579 DLIAVVHQGKIV-EKGTHDELIKDPEGPYTQLVRLQEGSKEAEDALATDADKLDSSFDILDKAMTRSGSRGESMRRSISR 657 (1283)
Q Consensus 579 d~i~vl~~G~i~-~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 657 (1283)
|+|++|++|+++ ..|+++++++.. . ...+. . . .
T Consensus 226 d~v~~l~~g~i~~~~g~~~~~~~~~--------~-----~~~~~------~--~----~--------------------- 259 (552)
T TIGR03719 226 GWILELDRGRGIPWEGNYSSWLEQK--------E-----KRLEQ------E--E----K--------------------- 259 (552)
T ss_pred CeEEEEECCEEEEecCCHHHHHHHH--------H-----HHHHH------H--H----H---------------------
Confidence 999999999976 667777654320 0 00000 0 0 0
Q ss_pred cCCCCCCccccccCCCCCCCccccccCCCCCCCCchhhHhhhhhHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHH
Q 000789 658 HSSGSRHSFGFTYGVPGPINVFETEEGDQGGAERTPLMIEKRQKLSMRRLAYLNKPEFPVLLIGSIAAGIHGVIFPIFGL 737 (1283)
Q Consensus 658 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 737 (1283)
+. . .. ...+.
T Consensus 260 -------------------------~~-----------~-~~-~~~~~-------------------------------- 269 (552)
T TIGR03719 260 -------------------------EE-----------S-AR-QKALK-------------------------------- 269 (552)
T ss_pred -------------------------HH-----------H-HH-HHHHH--------------------------------
Confidence 00 0 00 00000
Q ss_pred HHHHHHHHhcCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChh
Q 000789 738 LLSSSIRMFFEPEDKLRKDSRFWALIYLVLGIINLIAVPFQNYFFGVAGGKLIRRIRSLTFEKVVHQEISWFDDPANSSG 817 (1283)
Q Consensus 738 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~ff~~~~~~~G 817 (1283)
T Consensus 270 -------------------------------------------------------------------------------- 269 (552)
T TIGR03719 270 -------------------------------------------------------------------------------- 269 (552)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Q 000789 818 SVGARLSTDASTIRSLVGDSLALVVQNIATIAAGLIIAFTANWILAFVILAVSPLMLVQGYTQTKFMKGFSADAKLMYEE 897 (1283)
Q Consensus 818 ~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~ 897 (1283)
+. ..| .+. . . .
T Consensus 270 ----~~----------------------------------~~~-----------------------~~~-~--~-----~ 280 (552)
T TIGR03719 270 ----RE----------------------------------LEW-----------------------VRS-S--P-----K 280 (552)
T ss_pred ----HH----------------------------------HHH-----------------------HHh-h--h-----h
Confidence 00 000 000 0 0 0
Q ss_pred HHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHhcHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHH
Q 000789 898 ASQVANDAVGSIRTVASFCSEEKVMDLYEKKCEGPLKNGVRRGILSGAGFGFSFLVLYCTNAFCFYIGSVLVEHGKATFG 977 (1283)
Q Consensus 898 ~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~g~~~~~ 977 (1283)
. . ++ .......
T Consensus 281 -~---~---------~~--~~~~~~~------------------------------------------------------ 291 (552)
T TIGR03719 281 -A---R---------QA--KSKARLA------------------------------------------------------ 291 (552)
T ss_pred -h---H---------HH--HHHHHHH------------------------------------------------------
Confidence 0 0 00 0000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCCCCCCCCCcCCccCCCcccEEEEEEEEECCCCCCcc
Q 000789 978 QVFKVFFALTISALGVSQTSAMAPDTTKAKDSAASIFEI-LDSKPKIDSSKDEGMTLSSVGGAIELRCVSFKYPTRPDVQ 1056 (1283)
Q Consensus 978 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~-~~~~~~~~~~~~~~~~~~~~~g~I~~~nVsf~Y~~~~~~~ 1056 (1283)
..++..+. ....++........ .....+..|+++||+++|++ .+
T Consensus 292 -------------------------------~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~l~~~~~~---~~ 336 (552)
T TIGR03719 292 -------------------------------RYEELLSQEFQKRNETAEIYIPP-GPRLGDKVIEAENLSKGFGD---KL 336 (552)
T ss_pred -------------------------------HHHhhhhhcccccCCCceeecCC-CCCCCCeEEEEeeEEEEECC---ee
Confidence 00000000 00000000000000 00011235999999999974 35
Q ss_pred cccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHhcceEEEccCCC-CC-hhhHHH
Q 000789 1057 IFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMGLVSQEPV-LF-NETIRT 1134 (1283)
Q Consensus 1057 vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qdp~-Lf-~gTIre 1134 (1283)
+|+|+||+|++||++||+||||||||||+++|+|+.+|++|+|.+++ ++ +|+||||++. ++ +.|++|
T Consensus 337 ~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~~~~-~~----------~i~~v~q~~~~~~~~~tv~e 405 (552)
T TIGR03719 337 LIDDLSFKLPPGGIVGVIGPNGAGKSTLFRMITGQEQPDSGTIKIGE-TV----------KLAYVDQSRDALDPNKTVWE 405 (552)
T ss_pred eeccceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCeEEEECC-ce----------EEEEEeCCccccCCCCcHHH
Confidence 99999999999999999999999999999999999999999999954 21 6999999973 55 469999
Q ss_pred HHhcCCC-CCCC--HHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHHHHHccCCCEEEEecccCCCC
Q 000789 1135 NIAYGKQ-GGAT--EEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALD 1211 (1283)
Q Consensus 1135 Nl~~g~~-~~~s--d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiARAll~~p~ILiLDEaTSaLD 1211 (1283)
|+.++.. .... +.+..++++..++.+. ........||||||||++||||++.+|++|||||||++||
T Consensus 406 ~l~~~~~~~~~~~~~~~~~~~l~~~~l~~~----------~~~~~~~~LSgGe~qrv~la~al~~~p~lllLDEPt~~LD 475 (552)
T TIGR03719 406 EISGGLDIIQLGKREVPSRAYVGRFNFKGS----------DQQKKVGQLSGGERNRVHLAKTLKSGGNVLLLDEPTNDLD 475 (552)
T ss_pred HHHhhccccccCcchHHHHHHHHhCCCChh----------HhcCchhhCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCC
Confidence 9987521 1111 2233344444433211 1223345799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHcCCceEEEEecCchHHhh-cCEEEEEeC-CEEE-EecChHHHHhc
Q 000789 1212 AESERVVQDALERVMVNRTTVVVAHRLTTIKN-ADIIAVVKN-GVIA-EQGSHDALMKI 1267 (1283)
Q Consensus 1212 ~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~D~I~vl~~-G~Iv-e~Gt~~eLl~~ 1267 (1283)
+.+...+.+.|+++ ++|+|+|||+++.+.. ||+|++|++ |+++ ..|+++++.+.
T Consensus 476 ~~~~~~l~~~l~~~--~~~viivsHd~~~~~~~~d~i~~l~~~~~~~~~~g~~~~~~~~ 532 (552)
T TIGR03719 476 VETLRALEEALLEF--AGCAVVISHDRWFLDRIATHILAFEGDSHVEWFEGNYSEYEED 532 (552)
T ss_pred HHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHhCCEEEEEECCCeEEEeCCCHHHHHHH
Confidence 99999999999987 3599999999999876 999999987 6877 45888877653
No 92
>PRK10522 multidrug transporter membrane component/ATP-binding component; Provisional
Probab=100.00 E-value=6.3e-65 Score=631.25 Aligned_cols=473 Identities=19% Similarity=0.222 Sum_probs=376.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 771 NLIAVPFQNYFFGVAGGKLIRRIRSLTFEKVVHQEISWFDDPANSSGSVGARLSTDASTIRSLVGDSLALVVQNIATIAA 850 (1283)
Q Consensus 771 ~~l~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~ff~~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~~~ 850 (1283)
..++.++..++....+.++..++|.++|+++++.|++||++ +++|++++|+++|++.+...+. .+..++..++.+++
T Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~lR~~l~~~ll~~~~~~~~~--~~~g~~lsrl~~dv~~i~~~~~-~l~~~~~~~~~~i~ 137 (547)
T PRK10522 61 LMAVTLGSQLALTTLGHHFVYRLRSEFIKRILDTHVERIEQ--LGSASLLASLTSDVRNITIAFV-RLPELVQGIILTLG 137 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhc--cCccchHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 34566778888899999999999999999999999999995 8899999999999999998765 46777888888888
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccH---HHHHHHHHH
Q 000789 851 GLIIAFTANWILAFVILAVSPLMLVQGYTQTKFMKGFSADAKLMYEEASQVANDAVGSIRTVASFCSE---EKVMDLYEK 927 (1283)
Q Consensus 851 ~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~---~~~~~~~~~ 927 (1283)
++++++.++|++++++++++|+.++..++..+..++..++.++...+..+.+.|.+.|+++++ ++.+ +.+.++|.+
T Consensus 138 ~~~~l~~~~~~l~li~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~-~~~~~~~~~~~~~~~~ 216 (547)
T PRK10522 138 SAAYLAWLSPKMLLVTAIWMAVTIWGGFVLVARVYKHMATLRETEDKLYNDYQTVLEGRKELT-LNRERAEYVFENEYEP 216 (547)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhh-ccHHHHHHHHHHHHhH
Confidence 899999999999999999999888777777777676677778888889999999999999995 4443 456777777
Q ss_pred HHhcHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 928 KCEGPLKNGVRRGILSGAGFGFSFLVLYCTNAFCFYIGSVLVEHGKATFGQVFKVFFALTISALGVSQTSAMAPDTTKAK 1007 (1283)
Q Consensus 928 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1007 (1283)
..++..+...+..........+..........+.++++... +..+.+....+..+......|+..+...+..+..+.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~ 293 (547)
T PRK10522 217 DAQEYRHHIIRADTFHLSAVNWSNIMMLGAIGLVFYMANSL---GWADTNVAATYSLTLLFLRTPLLSAVGALPTLLSAQ 293 (547)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---hcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77776665555444333322222222222222222333221 112233333333333345578999999999999999
Q ss_pred HHHHHHHHHhccCCCCCCCCCcCCccCCCcccEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHH
Q 000789 1008 DSAASIFEILDSKPKIDSSKDEGMTLSSVGGAIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIAL 1087 (1283)
Q Consensus 1008 ~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~l 1087 (1283)
.+.+|+.++.+.+++.+... ..+. +..+.|+++||+|+|+++ .++|+|+||+|+|||++|||||||||||||+++
T Consensus 294 ~a~~ri~~l~~~~~~~~~~~--~~~~-~~~~~i~~~~v~f~y~~~--~~~l~~i~~~i~~G~~~aivG~sGsGKSTL~~l 368 (547)
T PRK10522 294 VAFNKLNKLALAPYKAEFPR--PQAF-PDWQTLELRNVTFAYQDN--GFSVGPINLTIKRGELLFLIGGNGSGKSTLAML 368 (547)
T ss_pred HHHHHHHHHhcccccccccc--cccc-CcCceEEEEEEEEEeCCC--CeEEecceEEEcCCCEEEEECCCCCCHHHHHHH
Confidence 99999999875433221111 1111 113579999999999843 469999999999999999999999999999999
Q ss_pred HhccCCCCcceEEECCccCCCCChHHHhcceEEEccCCCCChhhHHHHHhcCCCCCCCHHHHHHHHHHhChHHHHHhCCC
Q 000789 1088 IERFYDPDSGHVLLDNIELPKFKLSWLRQQMGLVSQEPVLFNETIRTNIAYGKQGGATEEEIIAATEASNAHNFISALPH 1167 (1283)
Q Consensus 1088 L~rl~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~I~~lp~ 1167 (1283)
|+|+|+|++|+|.+||+|+++++.+++|++++||||||.+|++|+++| + .+.++++++++++.+++.+++. .|+
T Consensus 369 l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~n---~--~~~~~~~~~~~~~~~~l~~~~~-~~~ 442 (547)
T PRK10522 369 LTGLYQPQSGEILLDGKPVTAEQPEDYRKLFSAVFTDFHLFDQLLGPE---G--KPANPALVEKWLERLKMAHKLE-LED 442 (547)
T ss_pred HhCCCCCCCeEEEECCEECCCCCHHHHhhheEEEecChhHHHHhhccc---c--CchHHHHHHHHHHHcCCchhhh-ccc
Confidence 999999999999999999999999999999999999999999999999 3 2577888888888888776654 244
Q ss_pred CcccccCCCCCCCChhHHHHHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHc--CCceEEEEecCchHHhhcC
Q 000789 1168 GYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVM--VNRTTVVVAHRLTTIKNAD 1245 (1283)
Q Consensus 1168 Gldt~vge~G~~LSgGQrQRlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~--~~~TvI~IaHrl~ti~~~D 1245 (1283)
|. .+|.+|||||||||+||||++++|+|||||||||+||+++|+.+.+.+.+.. +++|+|+||||+++++.||
T Consensus 443 ~~-----~~G~~LSgGq~qRl~lARal~~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tvi~itH~~~~~~~~d 517 (547)
T PRK10522 443 GR-----ISNLKLSKGQKKRLALLLALAEERDILLLDEWAADQDPHFRREFYQVLLPLLQEMGKTIFAISHDDHYFIHAD 517 (547)
T ss_pred cC-----CCCCCCCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEEechHHHHhCC
Confidence 42 1478999999999999999999999999999999999999999999997654 4799999999999999999
Q ss_pred EEEEEeCCEEEEe-cChHHHHh
Q 000789 1246 IIAVVKNGVIAEQ-GSHDALMK 1266 (1283)
Q Consensus 1246 ~I~vl~~G~Ive~-Gt~~eLl~ 1266 (1283)
+|++|++|+++|. |++.+-..
T Consensus 518 ~i~~l~~G~i~e~~~~~~~~~~ 539 (547)
T PRK10522 518 RLLEMRNGQLSELTGEERDAAS 539 (547)
T ss_pred EEEEEECCEEEEecCCchhhhh
Confidence 9999999999987 66665544
No 93
>TIGR00954 3a01203 Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protei.
Probab=100.00 E-value=4.4e-65 Score=639.96 Aligned_cols=531 Identities=15% Similarity=0.126 Sum_probs=441.4
Q ss_pred hHHHHHHhhchhhH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 37 PFYKLFAFADKQDA----VLMIVGTISAIGSGLAHPFMTLIFGHLINSFGSSDRSHVVHEVSKVAVKFLYLAAGTGIAAF 112 (1283)
Q Consensus 37 ~~~~l~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (1283)
.+++++++++|+++ ..+++.+++.++.+++....|++.+.++|.+...+...+...+..++++++++.++..+..|
T Consensus 78 ~~~~l~~~~~p~~~~~~~~~l~~~~~~~~~~t~~~l~~~~l~~~iid~l~~~~~~~f~~~l~~~~l~~~~~~~~~~~~~~ 157 (659)
T TIGR00954 78 KLDFLLKILIPRVFCKETGLLILIAFLLVSRTYLSVYVATLDGQIESSIVRRSPRNFAWILFKWFLIAPPASFINSAIKY 157 (659)
T ss_pred HHHHHHHHHcCcccchHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 36667888877653 25667777778888888999999999999876443322322233333344444555666777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCccHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 113 LQVSCWMVTGERQATRIRGLYLKTILRQDIGFFDTETTTGEVIGRMSGDTILIQEAMGEKVGKFIQLMSTFFGGFVVALA 192 (1283)
Q Consensus 113 ~~~~~~~~~~~~~~~~lR~~~~~~ll~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~ 192 (1283)
+..++......++..++|.+++++....++.+||+ ++|++.+|+++|++.+.+.+...+..++..++.+++.+++++.
T Consensus 158 ~~~~~~~~~r~~l~~~l~~~~~~~~~~~~~~~~d~--~~g~~~srlt~Dv~~i~~~~~~~~~~l~~~~~~ii~~~~~L~~ 235 (659)
T TIGR00954 158 LLKELKLRFRVRLTRYLYSKYLSGFTFYKVSNLDS--RIQNPDQLLTQDVEKFCDSVVELYSNLTKPILDVILYSFKLLT 235 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCceEEeccCCC--CCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777888888999999999999988889999984 6899999999999999999999999999999999888887776
Q ss_pred -HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHHHHHH
Q 000789 193 -RGWFLALVLLACLPAIVIAGGSMALIMSKMSSRGQIAYSEAGTVVEQTVSGIRTVSSFTGEKQAIEKYNNKLQVAYRAA 271 (1283)
Q Consensus 193 -~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~ 271 (1283)
++|.+++++++.+|+.+++.+++.+++.+..++.++..++..+.++|.++|+++||+|+.|+.+.++|++..++..+..
T Consensus 236 ~~~~~l~l~~l~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~I~~~~~e~~e~~~~~~~~~~l~~~~ 315 (659)
T TIGR00954 236 ALGSVGPAGLFAYLFATGVVLTKLRPPIGKLTVEEQALEGEYRYVHSRLIMNSEEIAFYQGNKVEKETVMSSFYRLVEHL 315 (659)
T ss_pred hcchHHHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHH-h----cCccHHHHHH-HHHH---HHHHHHHHHHHHHHHHHHHH
Q 000789 272 VQQGMVSGIGLGVLMLTVIG--TYGLAVWYGSKLII-E----KGYNGGTVIN-VIMA---IMTGGMSLGQTSPCLNAFAG 340 (1283)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~v~-~----~~~t~g~~~~-~~~~---~~~~~~~l~~~~~~~~~~~~ 340 (1283)
.+..++.+...++..++... ..++.++.|...+. . |.+|.|.+++ ++.+ +.....|+..+...+..+++
T Consensus 316 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~~~~~~~~~g~~t~g~~~~~f~~~~~~~~~l~~~~~~l~~~~~~i~~ 395 (659)
T TIGR00954 316 NLIIKFRFSYGFLDNIVAKYTWSAVGLVAVSIPIFDKTHPAFLEMSEEELMQEFYNNGRLLLKAADALGRLMLAGRDMTR 395 (659)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99888888888877776542 23333334443332 2 6789888776 4444 34557899999999999999
Q ss_pred HHHHHHHHHHHHccCCCCCCC--------C-CCC-------------CcccCccccEEEEEEEEECCCCCCCcccccceE
Q 000789 341 GQAAAYKMFETIKRKPKIDPY--------D-TSG-------------ITLEKIEGEIELRDVYFRYPARPEVQIFAGFSL 398 (1283)
Q Consensus 341 ~~~a~~ri~~~l~~~~~~~~~--------~-~~~-------------~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~~ 398 (1283)
+.++.+|++++++.+++.+.. . ... .......+.|+++||+|+|+++ .++|+|+||
T Consensus 396 ~~~~~~Ri~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nv~~~~~~~--~~il~~isl 473 (659)
T TIGR00954 396 LAGFTARVDTLLQVLDDVKSGNFKRPRVEEIESGREGGRNSNLVPGRGIVEYQDNGIKFENIPLVTPNG--DVLIESLSF 473 (659)
T ss_pred HHHHHHHHHHHHHHHHHHhcccccccccccccccccccccccccccccccccCCCeEEEEeeEEECCCC--CeeeecceE
Confidence 999999999999754332100 0 000 0011123569999999999742 369999999
Q ss_pred EEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHHhcccEEEccCCCCCcccHHHHHhcCC---
Q 000789 399 HVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWIREKIGLVSQEPILFATSLRENIAYGK--- 475 (1283)
Q Consensus 399 ~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~--- 475 (1283)
+|++||+++|+||||||||||+++|+|+++|++|+|.+++ |++++||||+|++|++|++|||.++.
T Consensus 474 ~i~~Ge~~~IvG~nGsGKSTLl~lL~Gl~~~~~G~i~~~~-----------~~~i~~v~Q~~~l~~~tv~eni~~~~~~~ 542 (659)
T TIGR00954 474 EVPSGNHLLICGPNGCGKSSLFRILGELWPVYGGRLTKPA-----------KGKLFYVPQRPYMTLGTLRDQIIYPDSSE 542 (659)
T ss_pred EECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEeecC-----------CCcEEEECCCCCCCCcCHHHHHhcCCChh
Confidence 9999999999999999999999999999999999999874 56899999999999999999999874
Q ss_pred ----CCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHH
Q 000789 476 ----ENATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARAILKNPKILLLDEATSALDAESERI 551 (1283)
Q Consensus 476 ----~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARal~~~~~illlDE~ts~lD~~~~~~ 551 (1283)
+..+++++.++++.+++++++++ |.|+||..+ .+.+||||||||++||||++++|+++|||||||+||+++++.
T Consensus 543 ~~~~~~~~~~~i~~~l~~~~l~~~~~~-~~g~~~~~~-~~~~LSgGqkQRl~iARal~~~p~illLDEpts~LD~~~~~~ 620 (659)
T TIGR00954 543 DMKRRGLSDKDLEQILDNVQLTHILER-EGGWSAVQD-WMDVLSGGEKQRIAMARLFYHKPQFAILDECTSAVSVDVEGY 620 (659)
T ss_pred hhhccCCCHHHHHHHHHHcCCHHHHhh-cCCcccccc-cccCCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHH
Confidence 33567889999999999999988 899999876 567999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCeEEEEecCchhhhccCEEEEEeC
Q 000789 552 VQDALVKIMTSRTTVVVAHRLTTIRNADLIAVVHQ 586 (1283)
Q Consensus 552 i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~ 586 (1283)
+.+.+++. ++|+|+||||++.++.||+|++|+.
T Consensus 621 l~~~l~~~--~~tvI~isH~~~~~~~~d~il~l~~ 653 (659)
T TIGR00954 621 MYRLCREF--GITLFSVSHRKSLWKYHEYLLYMDG 653 (659)
T ss_pred HHHHHHHc--CCEEEEEeCchHHHHhCCEEEEEeC
Confidence 99999874 7999999999999999999999973
No 94
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=2.2e-64 Score=670.04 Aligned_cols=215 Identities=24% Similarity=0.366 Sum_probs=178.3
Q ss_pred ccEEEEEEEEECCCCC----------CcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCC--CcceEEECCcc
Q 000789 1038 GAIELRCVSFKYPTRP----------DVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDP--DSGHVLLDNIE 1105 (1283)
Q Consensus 1038 g~I~~~nVsf~Y~~~~----------~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~--~~G~I~idG~d 1105 (1283)
..+.|+||++..+..+ ...+|+|||++|+|||.+||+||||||||||+++|+|..++ .+|+|.+||.+
T Consensus 866 ~~~~~~~v~y~v~~~~~~~~~~~~~~~~~iL~~vs~~i~~Gel~aL~G~sGaGKTTLL~~LaG~~~~g~~~G~I~inG~~ 945 (1470)
T PLN03140 866 LAMSFDDVNYFVDMPAEMKEQGVTEDRLQLLREVTGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFP 945 (1470)
T ss_pred ceEEEEEEEEEEccCccccccccCcCCceEeeCcEEEEECCeEEEEECCCCCCHHHHHHHHcCCCCCCcccceEEECCcc
Confidence 3699999999985321 23699999999999999999999999999999999999773 68999999988
Q ss_pred CCCCChHHHhcceEEEccCCCCCh-hhHHHHHhcCC----CCCCCHHH----HHHHHHHhChHHHHHhCCCCcccccCCC
Q 000789 1106 LPKFKLSWLRQQMGLVSQEPVLFN-ETIRTNIAYGK----QGGATEEE----IIAATEASNAHNFISALPHGYETNVGER 1176 (1283)
Q Consensus 1106 i~~~~~~~lR~~i~~V~Qdp~Lf~-gTIreNl~~g~----~~~~sd~e----i~~al~~a~l~~~I~~lp~Gldt~vge~ 1176 (1283)
..+ ..+|+.++||+|++.++. .|++|||.++. +.+.++++ +.+.++..++.+. .|+.+|..
T Consensus 946 ~~~---~~~~~~igyv~Q~d~~~~~lTV~E~L~~~a~lr~~~~~~~~~~~~~v~~vl~~lgL~~~-------~~~~vg~~ 1015 (1470)
T PLN03140 946 KKQ---ETFARISGYCEQNDIHSPQVTVRESLIYSAFLRLPKEVSKEEKMMFVDEVMELVELDNL-------KDAIVGLP 1015 (1470)
T ss_pred CCh---HHhhhheEEEccccccCCCCcHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHCCChhH-------hCCccCCC
Confidence 642 456788999999987765 69999997642 11233332 4566666666543 46777754
Q ss_pred C-CCCChhHHHHHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchH-H-hhcCEEEEEeC
Q 000789 1177 G-VQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVM-VNRTTVVVAHRLTT-I-KNADIIAVVKN 1252 (1283)
Q Consensus 1177 G-~~LSgGQrQRlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHrl~t-i-~~~D~I~vl~~ 1252 (1283)
+ ..||||||||++|||||+.+|+||+||||||+||+.+...+.+.|+++. +++|||+++|+++. + ..||++++|++
T Consensus 1016 ~~~~LSgGerkRvsIa~aL~~~P~lL~LDEPTsgLD~~~a~~v~~~L~~l~~~g~tVI~t~Hq~~~~i~~~~D~vllL~~ 1095 (1470)
T PLN03140 1016 GVTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKR 1095 (1470)
T ss_pred CCCCcCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHhCCEEEEEcC
Confidence 4 5799999999999999999999999999999999999999999999875 47899999999984 4 56999999986
Q ss_pred -CEEEEecChH
Q 000789 1253 -GVIAEQGSHD 1262 (1283)
Q Consensus 1253 -G~Ive~Gt~~ 1262 (1283)
|+++++|++.
T Consensus 1096 gG~~v~~G~~~ 1106 (1470)
T PLN03140 1096 GGQVIYSGPLG 1106 (1470)
T ss_pred CCEEEEECCcc
Confidence 8999999864
No 95
>PRK10636 putative ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.2e-65 Score=637.81 Aligned_cols=201 Identities=25% Similarity=0.370 Sum_probs=166.5
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHhcce
Q 000789 1039 AIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQM 1118 (1283)
Q Consensus 1039 ~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i 1118 (1283)
.|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+++. .++
T Consensus 312 ~l~~~~l~~~y~~---~~il~~isl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~~G~i~~~~~-----------~~i 377 (638)
T PRK10636 312 LLKMEKVSAGYGD---RIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELAPVSGEIGLAKG-----------IKL 377 (638)
T ss_pred eEEEEeeEEEeCC---eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCC-----------EEE
Confidence 5999999999974 35999999999999999999999999999999999999999999999741 269
Q ss_pred EEEccCC--CCC-hhhHHHHHhcCCCCCCCHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHHHHHc
Q 000789 1119 GLVSQEP--VLF-NETIRTNIAYGKQGGATEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVL 1195 (1283)
Q Consensus 1119 ~~V~Qdp--~Lf-~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiARAll 1195 (1283)
+|++|++ .++ ..|+.+++... .+...++++.+.++..++.+- -.+.+ ...||||||||++||||++
T Consensus 378 gy~~Q~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~L~~~~l~~~------~~~~~----~~~LSgGekqRl~La~~l~ 446 (638)
T PRK10636 378 GYFAQHQLEFLRADESPLQHLARL-APQELEQKLRDYLGGFGFQGD------KVTEE----TRRFSGGEKARLVLALIVW 446 (638)
T ss_pred EEecCcchhhCCccchHHHHHHHh-CchhhHHHHHHHHHHcCCChh------HhcCc----hhhCCHHHHHHHHHHHHHh
Confidence 9999985 343 34888887421 112234556666665554210 12233 3479999999999999999
Q ss_pred cCCCEEEEecccCCCCHHHHHHHHHHHHHHcCCceEEEEecCchHHhh-cCEEEEEeCCEEE-EecChHHHHh
Q 000789 1196 KNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKN-ADIIAVVKNGVIA-EQGSHDALMK 1266 (1283)
Q Consensus 1196 ~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Iv-e~Gt~~eLl~ 1266 (1283)
.+|+||||||||++||+.+...+.+.|+++ +.|||+|||+++.+.. ||+|++|++|+++ ..|++++..+
T Consensus 447 ~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~--~gtvi~vSHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 517 (638)
T PRK10636 447 QRPNLLLLDEPTNHLDLDMRQALTEALIDF--EGALVVVSHDRHLLRSTTDDLYLVHDGKVEPFDGDLEDYQQ 517 (638)
T ss_pred cCCCEEEEcCCCCCCCHHHHHHHHHHHHHc--CCeEEEEeCCHHHHHHhCCEEEEEECCEEEEcCCCHHHHHH
Confidence 999999999999999999999999999986 4599999999999976 9999999999997 6799988743
No 96
>PRK11147 ABC transporter ATPase component; Reviewed
Probab=100.00 E-value=1.3e-63 Score=626.62 Aligned_cols=202 Identities=26% Similarity=0.414 Sum_probs=165.4
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHhcce
Q 000789 1039 AIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQM 1118 (1283)
Q Consensus 1039 ~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i 1118 (1283)
.|+++||+++|++ .++|+|+||+|++|+++||+||||||||||+++|+|+++|++|+|.+ |.++ .|
T Consensus 319 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~~G~i~~-~~~~----------~i 384 (635)
T PRK11147 319 VFEMENVNYQIDG---KQLVKDFSAQVQRGDKIALIGPNGCGKTTLLKLMLGQLQADSGRIHC-GTKL----------EV 384 (635)
T ss_pred eEEEeeeEEEECC---eEEEcCcEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEE-CCCc----------EE
Confidence 5999999999974 35999999999999999999999999999999999999999999999 4332 59
Q ss_pred EEEccCC-CCCh-hhHHHHHhcCCCC-CCC--HHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHHHH
Q 000789 1119 GLVSQEP-VLFN-ETIRTNIAYGKQG-GAT--EEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARA 1193 (1283)
Q Consensus 1119 ~~V~Qdp-~Lf~-gTIreNl~~g~~~-~~s--d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiARA 1193 (1283)
+|++|++ .++. .|+.||+.++... ... +.++.+.++..++.+ +..+.++ ..||||||||++||||
T Consensus 385 ~y~~q~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~l~~~~l~~------~~~~~~~----~~LSgGekqRl~la~a 454 (635)
T PRK11147 385 AYFDQHRAELDPEKTVMDNLAEGKQEVMVNGRPRHVLGYLQDFLFHP------KRAMTPV----KALSGGERNRLLLARL 454 (635)
T ss_pred EEEeCcccccCCCCCHHHHHHhhcccccccchHHHHHHHHHhcCCCH------HHHhChh----hhCCHHHHHHHHHHHH
Confidence 9999986 3554 5999999864221 011 333444444443321 1123333 4799999999999999
Q ss_pred HccCCCEEEEecccCCCCHHHHHHHHHHHHHHcCCceEEEEecCchHHhh-cCEEEEEe-CCEEEEe-cChHHHHh
Q 000789 1194 VLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKN-ADIIAVVK-NGVIAEQ-GSHDALMK 1266 (1283)
Q Consensus 1194 ll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~D~I~vl~-~G~Ive~-Gt~~eLl~ 1266 (1283)
++.+|++|||||||++||+.+...+.+.|++. ++|+|+|||+++.+.. ||+|++|+ +|++.++ |++++.++
T Consensus 455 l~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vSHd~~~~~~~~d~i~~l~~~g~i~~~~g~y~~y~~ 528 (635)
T PRK11147 455 FLKPSNLLILDEPTNDLDVETLELLEELLDSY--QGTVLLVSHDRQFVDNTVTECWIFEGNGKIGRYVGGYHDARQ 528 (635)
T ss_pred HhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhC--CCeEEEEECCHHHHHHhcCEEEEEeCCCeEEEccCCHHHHHH
Confidence 99999999999999999999999999999886 5699999999999976 99999998 8999875 88888754
No 97
>PLN03073 ABC transporter F family; Provisional
Probab=100.00 E-value=1.1e-63 Score=624.75 Aligned_cols=201 Identities=29% Similarity=0.405 Sum_probs=166.0
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHhcce
Q 000789 1039 AIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQM 1118 (1283)
Q Consensus 1039 ~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i 1118 (1283)
.|+++||+++|++. .++|+|+||+|++||++||+||||||||||+++|+|+.+|++|+|.+++ +.+|
T Consensus 508 ~L~~~~ls~~y~~~--~~il~~vsl~i~~Ge~i~LvG~NGsGKSTLLk~L~Gll~p~~G~I~~~~-----------~~~i 574 (718)
T PLN03073 508 IISFSDASFGYPGG--PLLFKNLNFGIDLDSRIAMVGPNGIGKSTILKLISGELQPSSGTVFRSA-----------KVRM 574 (718)
T ss_pred eEEEEeeEEEeCCC--CeeEeccEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCceEEECC-----------ceeE
Confidence 59999999999642 3589999999999999999999999999999999999999999999875 3479
Q ss_pred EEEccCCCCChhhHHHHHh--cC-CCCCCCHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHHHHHc
Q 000789 1119 GLVSQEPVLFNETIRTNIA--YG-KQGGATEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVL 1195 (1283)
Q Consensus 1119 ~~V~Qdp~Lf~gTIreNl~--~g-~~~~~sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiARAll 1195 (1283)
+|+||++. ...++.+|.. +. ..+..+++++.++++..++.+.. .......||||||||++||||++
T Consensus 575 gyv~Q~~~-~~l~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~~~----------~~~~~~~LSgGqkqRvaLAraL~ 643 (718)
T PLN03073 575 AVFSQHHV-DGLDLSSNPLLYMMRCFPGVPEQKLRAHLGSFGVTGNL----------ALQPMYTLSGGQKSRVAFAKITF 643 (718)
T ss_pred EEEecccc-ccCCcchhHHHHHHHhcCCCCHHHHHHHHHHCCCChHH----------hcCCccccCHHHHHHHHHHHHHh
Confidence 99999973 2334555532 11 01234577788888877775321 11234589999999999999999
Q ss_pred cCCCEEEEecccCCCCHHHHHHHHHHHHHHcCCceEEEEecCchHHhh-cCEEEEEeCCEEE-EecChHHHH
Q 000789 1196 KNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKN-ADIIAVVKNGVIA-EQGSHDALM 1265 (1283)
Q Consensus 1196 ~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Iv-e~Gt~~eLl 1265 (1283)
++|++|||||||++||+.+...+.+.|.+. ++|+|+|||+++.+.. ||+|++|++|+++ ..|++++..
T Consensus 644 ~~p~lLLLDEPT~~LD~~s~~~l~~~L~~~--~gtvIivSHd~~~i~~~~drv~~l~~G~i~~~~g~~~~~~ 713 (718)
T PLN03073 644 KKPHILLLDEPSNHLDLDAVEALIQGLVLF--QGGVLMVSHDEHLISGSVDELWVVSEGKVTPFHGTFHDYK 713 (718)
T ss_pred cCCCEEEEcCCCCCCCHHHHHHHHHHHHHc--CCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCCHHHHH
Confidence 999999999999999999999999999875 3599999999999986 9999999999998 578887654
No 98
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.4e-63 Score=573.60 Aligned_cols=453 Identities=26% Similarity=0.423 Sum_probs=356.0
Q ss_pred cEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHH-HHhcc
Q 000789 374 EIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLK-WIREK 452 (1283)
Q Consensus 374 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~-~~r~~ 452 (1283)
-++++|++++|++ .++|+||||++.+||++|++|.||||||||+|+|+|.|+|++|+|.+||+++.-.++. .....
T Consensus 8 ll~~~~i~K~Fgg---V~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~p~~G~I~~~G~~~~~~sp~~A~~~G 84 (500)
T COG1129 8 LLELRGISKSFGG---VKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYPPDSGEILIDGKPVAFSSPRDALAAG 84 (500)
T ss_pred eeeeecceEEcCC---ceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCcccCCCceEEECCEEccCCCHHHHHhCC
Confidence 4889999999974 5799999999999999999999999999999999999999999999999999876654 55678
Q ss_pred cEEEccCCCCCcc-cHHHHHhcCCCCCC------HHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHH
Q 000789 453 IGLVSQEPILFAT-SLRENIAYGKENAT------DQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIA 525 (1283)
Q Consensus 453 i~~v~Q~~~l~~~-ti~~ni~~~~~~~~------~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiA 525 (1283)
|+.|+||..|++. ||.|||.+|++... ..+..+.+ .+.++.+ |++........+||+||||-|+||
T Consensus 85 I~~V~QEl~L~p~LsVaeNifLgre~~~~~g~id~~~m~~~A-----~~~l~~l--g~~~~~~~~v~~LsiaqrQ~VeIA 157 (500)
T COG1129 85 IATVHQELSLVPNLSVAENIFLGREPTRRFGLIDRKAMRRRA-----RELLARL--GLDIDPDTLVGDLSIAQRQMVEIA 157 (500)
T ss_pred cEEEeechhccCCccHHHHhhcccccccCCCccCHHHHHHHH-----HHHHHHc--CCCCChhhhhhhCCHHHHHHHHHH
Confidence 9999999999976 99999999976432 23333332 2445555 432225555678999999999999
Q ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhc-cCEEEEEeCCEEeEecCh-hHHhcCC
Q 000789 526 RAILKNPKILLLDEATSALDAESERIVQDALVKIM-TSRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTH-DELIKDP 602 (1283)
Q Consensus 526 Ral~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~-~~l~~~~ 602 (1283)
||+..+++|||||||||+|+....+.+.+.+++++ +|.++|+||||++++.. ||||.||.||+.+..++. .++-.
T Consensus 158 rAl~~~arllIlDEPTaaLt~~E~~~Lf~~ir~Lk~~Gv~ii~ISHrl~Ei~~i~DritVlRDG~~v~~~~~~~~~~~-- 235 (500)
T COG1129 158 RALSFDARVLILDEPTAALTVKETERLFDLIRRLKAQGVAIIYISHRLDEVFEIADRITVLRDGRVVGTRPTAAETSE-- 235 (500)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHhcCEEEEEeCCEEeeecccccCCCH--
Confidence 99999999999999999999999999999999986 57899999999999876 999999999999865431 00000
Q ss_pred CChhHHHHHHhhcCchhhhhhhccccccCchhhhhhhhhcCCCCCCccccccccccCCCCCCccccccCCCCCCCccccc
Q 000789 603 EGPYTQLVRLQEGSKEAEDALATDADKLDSSFDILDKAMTRSGSRGESMRRSISRHSSGSRHSFGFTYGVPGPINVFETE 682 (1283)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 682 (1283)
.++.+
T Consensus 236 ----~~lv~----------------------------------------------------------------------- 240 (500)
T COG1129 236 ----DELVR----------------------------------------------------------------------- 240 (500)
T ss_pred ----HHHHH-----------------------------------------------------------------------
Confidence 00000
Q ss_pred cCCCCCCCCchhhHhhhhhHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhhhhHHHHH
Q 000789 683 EGDQGGAERTPLMIEKRQKLSMRRLAYLNKPEFPVLLIGSIAAGIHGVIFPIFGLLLSSSIRMFFEPEDKLRKDSRFWAL 762 (1283)
Q Consensus 683 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 762 (1283)
.+
T Consensus 241 --------------------------------------------------------------~M---------------- 242 (500)
T COG1129 241 --------------------------------------------------------------LM---------------- 242 (500)
T ss_pred --------------------------------------------------------------Hh----------------
Confidence 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChhHHHHHHhhhHHHHHHHHHHHHHHHH
Q 000789 763 IYLVLGIINLIAVPFQNYFFGVAGGKLIRRIRSLTFEKVVHQEISWFDDPANSSGSVGARLSTDASTIRSLVGDSLALVV 842 (1283)
Q Consensus 763 ~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~ff~~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~ 842 (1283)
.|+
T Consensus 243 -----------------------------------------------------vGr------------------------ 245 (500)
T COG1129 243 -----------------------------------------------------VGR------------------------ 245 (500)
T ss_pred -----------------------------------------------------hCc------------------------
Confidence 000
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHH
Q 000789 843 QNIATIAAGLIIAFTANWILAFVILAVSPLMLVQGYTQTKFMKGFSADAKLMYEEASQVANDAVGSIRTVASFCSEEKVM 922 (1283)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~ 922 (1283)
T Consensus 246 -------------------------------------------------------------------------------- 245 (500)
T COG1129 246 -------------------------------------------------------------------------------- 245 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHhcHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 923 DLYEKKCEGPLKNGVRRGILSGAGFGFSFLVLYCTNAFCFYIGSVLVEHGKATFGQVFKVFFALTISALGVSQTSAMAPD 1002 (1283)
Q Consensus 923 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1002 (1283)
T Consensus 246 -------------------------------------------------------------------------------- 245 (500)
T COG1129 246 -------------------------------------------------------------------------------- 245 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHhccCCCCCCCCCcCCccCCCcccEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHH
Q 000789 1003 TTKAKDSAASIFEILDSKPKIDSSKDEGMTLSSVGGAIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKS 1082 (1283)
Q Consensus 1003 ~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKS 1082 (1283)
++-+..|. ..... .....++++|++..- .++|+||++++||.+||.|-=|||+|
T Consensus 246 ------------~~~~~~~~-~~~~~------~~~~~l~v~~l~~~~-------~~~dvSf~vr~GEIlGiaGLvGaGRT 299 (500)
T COG1129 246 ------------ELEDLFPE-PPEEG------IGEPVLEVRNLSGGG-------KVRDVSFTVRAGEILGIAGLVGAGRT 299 (500)
T ss_pred ------------chhhhccc-ccccC------CCCcEEEEecCCCCC-------ceeCceeEEeCCcEEEEeccccCCHH
Confidence 00000000 00000 001146788876421 47899999999999999999999999
Q ss_pred HHHHHHhccCCCCcceEEECCccCCCCC-hHHHhcceEEEccCCC----CChhhHHHHHhcCCCCCCCHH-HHHHHHHHh
Q 000789 1083 TVIALIERFYDPDSGHVLLDNIELPKFK-LSWLRQQMGLVSQEPV----LFNETIRTNIAYGKQGGATEE-EIIAATEAS 1156 (1283)
Q Consensus 1083 TL~~lL~rl~~~~~G~I~idG~di~~~~-~~~lR~~i~~V~Qdp~----Lf~gTIreNl~~g~~~~~sd~-ei~~al~~a 1156 (1283)
-++++|+|..++.+|+|.+||+++.--+ .+..+..|+|||-|-. +...||++|+.+......+.. -+....++.
T Consensus 300 El~~~lfG~~~~~~G~i~l~G~~v~~~sp~~Ai~~Gi~~v~EDRk~~Gl~l~~sI~~Ni~l~~l~~~~~~~~i~~~~e~~ 379 (500)
T COG1129 300 ELARALFGARPASSGEILLDGKPVRIRSPRDAIKAGIAYVPEDRKSEGLVLDMSIAENITLASLRRFSRRGLIDRRKERA 379 (500)
T ss_pred HHHHHHhCCCcCCCceEEECCEEccCCCHHHHHHcCCEeCCcccccCcCcCCCcHHHheehHhhhhhccccccChHHHHH
Confidence 9999999999999999999999886655 5688899999998873 557899999976522111111 244455555
Q ss_pred ChHHHHHhCC---CCcccccCCCCCCCChhHHHHHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHc-CCceEE
Q 000789 1157 NAHNFISALP---HGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVM-VNRTTV 1232 (1283)
Q Consensus 1157 ~l~~~I~~lp---~Gldt~vge~G~~LSgGQrQRlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI 1232 (1283)
.+.+++.+|. .+.+.+++ +||||.+|+++|||+|..+|+||||||||.++|..+.++|.+.|+++. +|++||
T Consensus 380 ~~~~~~~~l~Ik~~s~~~~v~----~LSGGNQQKVvlarwL~~~p~vLilDEPTRGIDVGAK~eIy~li~~lA~~G~ail 455 (500)
T COG1129 380 LAERYIRRLRIKTPSPEQPIG----TLSGGNQQKVVLARWLATDPKVLILDEPTRGIDVGAKAEIYRLIRELAAEGKAIL 455 (500)
T ss_pred HHHHHHHhcCcccCCccchhh----cCCchhhhhHHHHHHHhcCCCEEEECCCCcCcccchHHHHHHHHHHHHHCCCEEE
Confidence 6667777772 23445554 799999999999999999999999999999999999999999999986 579999
Q ss_pred EEecCchHHh-hcCEEEEEeCCEEEEe
Q 000789 1233 VVAHRLTTIK-NADIIAVVKNGVIAEQ 1258 (1283)
Q Consensus 1233 ~IaHrl~ti~-~~D~I~vl~~G~Ive~ 1258 (1283)
+||-.+..+. .||||+||.+|+|+..
T Consensus 456 ~iSSElpEll~~~DRIlVm~~Gri~~e 482 (500)
T COG1129 456 MISSELPELLGLSDRILVMREGRIVGE 482 (500)
T ss_pred EEeCChHHHHhhCCEEEEEECCEEEEE
Confidence 9999998886 5999999999999864
No 99
>TIGR00954 3a01203 Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protei.
Probab=100.00 E-value=4.7e-61 Score=603.51 Aligned_cols=529 Identities=15% Similarity=0.121 Sum_probs=431.5
Q ss_pred HHHHHHhhcChhH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCch-hhhhhhHHHHHHHHHHHHHHHHHHHH
Q 000789 704 MRRLAYLNKPEFP-----VLLIGSIAAGIHGVIFPIFGLLLSSSIRMFFEPED-KLRKDSRFWALIYLVLGIINLIAVPF 777 (1283)
Q Consensus 704 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~l~~~~ 777 (1283)
+++++++.+|+++ .+++.+++..+...+....+++.+.+++....... ........|.++++++.++..+..++
T Consensus 79 ~~~l~~~~~p~~~~~~~~~l~~~~~~~~~~t~~~l~~~~l~~~iid~l~~~~~~~f~~~l~~~~l~~~~~~~~~~~~~~~ 158 (659)
T TIGR00954 79 LDFLLKILIPRVFCKETGLLILIAFLLVSRTYLSVYVATLDGQIESSIVRRSPRNFAWILFKWFLIAPPASFINSAIKYL 158 (659)
T ss_pred HHHHHHHHcCcccchHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5566677777765 45555666666666666677777777765543211 11111233444555566667777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 778 QNYFFGVAGGKLIRRIRSLTFEKVVHQEISWFDDPANSSGSVGARLSTDASTIRSLVGDSLALVVQNIATIAAGLIIAFT 857 (1283)
Q Consensus 778 ~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~ff~~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~ 857 (1283)
..++......++..++|+..|++....++.|||+ ++|++.+|+++|++.+.+.+...+..++..++.++++++.++.
T Consensus 159 ~~~~~~~~r~~l~~~l~~~~~~~~~~~~~~~~d~---~~g~~~srlt~Dv~~i~~~~~~~~~~l~~~~~~ii~~~~~L~~ 235 (659)
T TIGR00954 159 LKELKLRFRVRLTRYLYSKYLSGFTFYKVSNLDS---RIQNPDQLLTQDVEKFCDSVVELYSNLTKPILDVILYSFKLLT 235 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCceEEeccCCC---CCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888888889999999999999988899999983 6899999999999999999999999999999999988887776
Q ss_pred -HhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHHhcHHHhH
Q 000789 858 -ANWILAFVILAVSPLMLVQGYTQTKFMKGFSADAKLMYEEASQVANDAVGSIRTVASFCSEEKVMDLYEKKCEGPLKNG 936 (1283)
Q Consensus 858 -~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~ 936 (1283)
.+|.+++++++.+|+..++..+..+...+..++.++..++..+.+.|.+.|+++|++|+.++.+.++|.+..++..+..
T Consensus 236 ~~~~~l~l~~l~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~I~~~~~e~~e~~~~~~~~~~l~~~~ 315 (659)
T TIGR00954 236 ALGSVGPAGLFAYLFATGVVLTKLRPPIGKLTVEEQALEGEYRYVHSRLIMNSEEIAFYQGNKVEKETVMSSFYRLVEHL 315 (659)
T ss_pred hcchHHHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999888888888889999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHH-hc----CCcCHHHHHHH-HH---HHHHHHHHHHHHHHHHHHHHH
Q 000789 937 VRRGILSGAGFGFSFLVLYC--TNAFCFYIGSVLV-EH----GKATFGQVFKV-FF---ALTISALGVSQTSAMAPDTTK 1005 (1283)
Q Consensus 937 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~l~-~~----g~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~ 1005 (1283)
.+...+......+..++... ..+..++.|...+ .. |.++.|.++.. .. ++.....|+..+.....++..
T Consensus 316 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~~~~~~~~~g~~t~g~~~~~f~~~~~~~~~l~~~~~~l~~~~~~i~~ 395 (659)
T TIGR00954 316 NLIIKFRFSYGFLDNIVAKYTWSAVGLVAVSIPIFDKTHPAFLEMSEEELMQEFYNNGRLLLKAADALGRLMLAGRDMTR 395 (659)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888887777776666542 2223333334233 22 78888877663 22 245567899999999999999
Q ss_pred HHHHHHHHHHHhccCCCCCC--------CC-CcC-------------CccCCCcccEEEEEEEEECCCCCCcccccceeE
Q 000789 1006 AKDSAASIFEILDSKPKIDS--------SK-DEG-------------MTLSSVGGAIELRCVSFKYPTRPDVQIFRNLCL 1063 (1283)
Q Consensus 1006 ~~~a~~ri~~~~~~~~~~~~--------~~-~~~-------------~~~~~~~g~I~~~nVsf~Y~~~~~~~vL~~is~ 1063 (1283)
+..+.+|++++++.+++... .. ... .......+.|+++||+|+|+++ .++|+|+||
T Consensus 396 ~~~~~~Ri~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nv~~~~~~~--~~il~~isl 473 (659)
T TIGR00954 396 LAGFTARVDTLLQVLDDVKSGNFKRPRVEEIESGREGGRNSNLVPGRGIVEYQDNGIKFENIPLVTPNG--DVLIESLSF 473 (659)
T ss_pred HHHHHHHHHHHHHHHHHHhcccccccccccccccccccccccccccccccccCCCeEEEEeeEEECCCC--CeeeecceE
Confidence 99999999999875332110 00 000 0011133569999999999743 369999999
Q ss_pred EecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHhcceEEEccCCCCChhhHHHHHhcCCC--
Q 000789 1064 SIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMGLVSQEPVLFNETIRTNIAYGKQ-- 1141 (1283)
Q Consensus 1064 ~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~-- 1141 (1283)
+|++||++||+||||||||||+++|+|+++|++|+|.+|+ |++++||||+|.+|++|++||+.++..
T Consensus 474 ~i~~Ge~~~IvG~nGsGKSTLl~lL~Gl~~~~~G~i~~~~-----------~~~i~~v~Q~~~l~~~tv~eni~~~~~~~ 542 (659)
T TIGR00954 474 EVPSGNHLLICGPNGCGKSSLFRILGELWPVYGGRLTKPA-----------KGKLFYVPQRPYMTLGTLRDQIIYPDSSE 542 (659)
T ss_pred EECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEeecC-----------CCcEEEECCCCCCCCcCHHHHHhcCCChh
Confidence 9999999999999999999999999999999999999874 678999999999999999999998631
Q ss_pred ----CCCCHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHHHHHccCCCEEEEecccCCCCHHHHHH
Q 000789 1142 ----GGATEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERV 1217 (1283)
Q Consensus 1142 ----~~~sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiARAll~~p~ILiLDEaTSaLD~~te~~ 1217 (1283)
++.++++++++++.+++++++.. |.|+||..+ .+.+||||||||++||||++++|++||||||||+||+++++.
T Consensus 543 ~~~~~~~~~~~i~~~l~~~~l~~~~~~-~~g~~~~~~-~~~~LSgGqkQRl~iARal~~~p~illLDEpts~LD~~~~~~ 620 (659)
T TIGR00954 543 DMKRRGLSDKDLEQILDNVQLTHILER-EGGWSAVQD-WMDVLSGGEKQRIAMARLFYHKPQFAILDECTSAVSVDVEGY 620 (659)
T ss_pred hhhccCCCHHHHHHHHHHcCCHHHHhh-cCCcccccc-cccCCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHH
Confidence 24678899999999999999987 999999986 567999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCceEEEEecCchHHhhcCEEEEEeC
Q 000789 1218 VQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKN 1252 (1283)
Q Consensus 1218 I~~~L~~~~~~~TvI~IaHrl~ti~~~D~I~vl~~ 1252 (1283)
+++.+++. ++|+|+||||+++++.||+|++|++
T Consensus 621 l~~~l~~~--~~tvI~isH~~~~~~~~d~il~l~~ 653 (659)
T TIGR00954 621 MYRLCREF--GITLFSVSHRKSLWKYHEYLLYMDG 653 (659)
T ss_pred HHHHHHHc--CCEEEEEeCchHHHHhCCEEEEEeC
Confidence 99999874 8999999999999999999999973
No 100
>PRK13409 putative ATPase RIL; Provisional
Probab=100.00 E-value=1.9e-63 Score=612.96 Aligned_cols=192 Identities=23% Similarity=0.309 Sum_probs=162.9
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHhcce
Q 000789 1039 AIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQM 1118 (1283)
Q Consensus 1039 ~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i 1118 (1283)
.++++|++++|++ ..|+++||+|++||++||+|+||||||||+++|+|+.+|++|+|.++ ..+
T Consensus 340 ~l~~~~ls~~~~~----~~l~~~s~~i~~Geiv~l~G~NGsGKSTLlk~L~Gl~~p~~G~I~~~-------------~~i 402 (590)
T PRK13409 340 LVEYPDLTKKLGD----FSLEVEGGEIYEGEVIGIVGPNGIGKTTFAKLLAGVLKPDEGEVDPE-------------LKI 402 (590)
T ss_pred EEEEcceEEEECC----EEEEecceEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEEe-------------eeE
Confidence 4999999999963 24999999999999999999999999999999999999999999986 159
Q ss_pred EEEccCCCC-ChhhHHHHHhcCCCCCC-CHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHHHHHcc
Q 000789 1119 GLVSQEPVL-FNETIRTNIAYGKQGGA-TEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLK 1196 (1283)
Q Consensus 1119 ~~V~Qdp~L-f~gTIreNl~~g~~~~~-sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiARAll~ 1196 (1283)
+|+||++.+ ++.|++||+.++.. .. .+..+.++++..++.+... . ....||||||||++|||||++
T Consensus 403 ~y~~Q~~~~~~~~tv~e~l~~~~~-~~~~~~~~~~~L~~l~l~~~~~-------~----~~~~LSGGe~QRvaiAraL~~ 470 (590)
T PRK13409 403 SYKPQYIKPDYDGTVEDLLRSITD-DLGSSYYKSEIIKPLQLERLLD-------K----NVKDLSGGELQRVAIAACLSR 470 (590)
T ss_pred EEecccccCCCCCcHHHHHHHHhh-hcChHHHHHHHHHHCCCHHHHh-------C----CcccCCHHHHHHHHHHHHHhc
Confidence 999999865 57799999986521 22 2334566677766654432 2 234799999999999999999
Q ss_pred CCCEEEEecccCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchHHhh-cCEEEEEeCCEEEEecC
Q 000789 1197 NPKILLLDEATSALDAESERVVQDALERVMV--NRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGS 1260 (1283)
Q Consensus 1197 ~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt 1260 (1283)
+|+||||||||++||+++...+.+.|+++.+ ++|+|+|||+++.+.. ||||++|++ ++...|+
T Consensus 471 ~p~llLLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivsHD~~~~~~~aDrvivl~~-~~~~~g~ 536 (590)
T PRK13409 471 DADLYLLDEPSAHLDVEQRLAVAKAIRRIAEEREATALVVDHDIYMIDYISDRLMVFEG-EPGKHGH 536 (590)
T ss_pred CCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEcC-cceeeee
Confidence 9999999999999999999999999998753 7899999999999876 999999975 7777665
No 101
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=100.00 E-value=2.7e-61 Score=576.29 Aligned_cols=486 Identities=27% Similarity=0.366 Sum_probs=347.1
Q ss_pred cEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHHhccc
Q 000789 374 EIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWIREKI 453 (1283)
Q Consensus 374 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 453 (1283)
.|+++|++++|++ +++|+|+||++.+|+++||||+||||||||+++|+|...|++|+|..++. -++
T Consensus 3 ~i~~~~ls~~~g~---~~l~~~~~l~~~~G~riGLvG~NGaGKSTLLkilaG~~~~~~G~i~~~~~-----------~~v 68 (530)
T COG0488 3 MITLENLSLAYGD---RPLLENVSLTLNPGERIGLVGRNGAGKSTLLKILAGELEPDSGEVTRPKG-----------LRV 68 (530)
T ss_pred eEEEeeeEEeeCC---ceeecCCcceeCCCCEEEEECCCCCCHHHHHHHHcCCCcCCCCeEeecCC-----------ceE
Confidence 4889999999963 46999999999999999999999999999999999999999999998752 269
Q ss_pred EEEccCCCCCcc-cHHHHHhcCCCCCCH--HHHHHHHH-------------------------HhcHHHHHHhCCCCccc
Q 000789 454 GLVSQEPILFAT-SLRENIAYGKENATD--QEIRTAIE-------------------------LANAAKFIDKLPKGLDT 505 (1283)
Q Consensus 454 ~~v~Q~~~l~~~-ti~~ni~~~~~~~~~--~~~~~~~~-------------------------~~~~~~~i~~lp~g~~t 505 (1283)
+|++|++.+.+. ||.+.+..+...... .+.+.+.. .+.+...+..+ |+..
T Consensus 69 ~~l~Q~~~~~~~~tv~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~L~gL--g~~~ 146 (530)
T COG0488 69 GYLSQEPPLDPEKTVLDYVIEGFGELRELLAELEEAYALLADPDDELLAELEALLEELDGWTLEARAEEALLGL--GFPD 146 (530)
T ss_pred EEeCCCCCcCCCccHHHHHHhhhHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHhhcccchHHHHHHHHhcC--CCCc
Confidence 999999999976 999999887542111 11111110 02222333344 4444
Q ss_pred cccCCCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhc-cCEEEEE
Q 000789 506 MAGEHGTQLSGGQKQRIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMTSRTTVVVAHRLTTIRN-ADLIAVV 584 (1283)
Q Consensus 506 ~~~~~g~~LSgGqkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl 584 (1283)
. .....+||||||.|++|||||+.+||+|||||||++||.++..++.+.|.+. ++ |+|+||||..++.+ |++|+.+
T Consensus 147 ~-~~~~~~LSGG~r~Rv~LA~aL~~~pDlLLLDEPTNHLD~~~i~WLe~~L~~~-~g-tviiVSHDR~FLd~V~t~I~~l 223 (530)
T COG0488 147 E-DRPVSSLSGGWRRRVALARALLEEPDLLLLDEPTNHLDLESIEWLEDYLKRY-PG-TVIVVSHDRYFLDNVATHILEL 223 (530)
T ss_pred c-cCchhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHHhC-CC-cEEEEeCCHHHHHHHhhheEEe
Confidence 4 4556789999999999999999999999999999999999999999999875 44 99999999999987 9999999
Q ss_pred eCCEEeEecChhHHhcCCCChhHHHHHHhhcCchhhhhhhccccccCchhhhhhhhhcCCCCCCccccccccccCCCCCC
Q 000789 585 HQGKIVEKGTHDELIKDPEGPYTQLVRLQEGSKEAEDALATDADKLDSSFDILDKAMTRSGSRGESMRRSISRHSSGSRH 664 (1283)
Q Consensus 585 ~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 664 (1283)
+.|++... .|.|..+.+........+.. .
T Consensus 224 d~g~l~~y----------~Gny~~~~~~r~~~~~~~~~-------------~---------------------------- 252 (530)
T COG0488 224 DRGKLTPY----------KGNYSSYLEQKAERLRQEAA-------------A---------------------------- 252 (530)
T ss_pred cCCceeEe----------cCCHHHHHHHHHHHHHHHHH-------------H----------------------------
Confidence 99987643 34554443321110000000 0
Q ss_pred ccccccCCCCCCCccccccCCCCCCCCchhhHhhhhhHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 665 SFGFTYGVPGPINVFETEEGDQGGAERTPLMIEKRQKLSMRRLAYLNKPEFPVLLIGSIAAGIHGVIFPIFGLLLSSSIR 744 (1283)
Q Consensus 665 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 744 (1283)
.+......+...
T Consensus 253 --------------------------------~~~~~~~~~~~~------------------------------------ 264 (530)
T COG0488 253 --------------------------------YEKQQKELAKEQ------------------------------------ 264 (530)
T ss_pred --------------------------------HHHHHHHHHHHH------------------------------------
Confidence 000000000000
Q ss_pred HhcCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChhHHHHHHh
Q 000789 745 MFFEPEDKLRKDSRFWALIYLVLGIINLIAVPFQNYFFGVAGGKLIRRIRSLTFEKVVHQEISWFDDPANSSGSVGARLS 824 (1283)
Q Consensus 745 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~ff~~~~~~~G~l~~rl~ 824 (1283)
T Consensus 265 -------------------------------------------------------------------------------- 264 (530)
T COG0488 265 -------------------------------------------------------------------------------- 264 (530)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Q 000789 825 TDASTIRSLVGDSLALVVQNIATIAAGLIIAFTANWILAFVILAVSPLMLVQGYTQTKFMKGFSADAKLMYEEASQVAND 904 (1283)
Q Consensus 825 ~D~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 904 (1283)
T Consensus 265 -------------------------------------------------------------------------------- 264 (530)
T COG0488 265 -------------------------------------------------------------------------------- 264 (530)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhhhHHHHHhccHHHHHHHHHHHHhcHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHH
Q 000789 905 AVGSIRTVASFCSEEKVMDLYEKKCEGPLKNGVRRGILSGAGFGFSFLVLYCTNAFCFYIGSVLVEHGKATFGQVFKVFF 984 (1283)
Q Consensus 905 ~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~g~~~~~~~~~~~~ 984 (1283)
.|.+++........+
T Consensus 265 ---------------~~i~r~~~~~~~~k~-------------------------------------------------- 279 (530)
T COG0488 265 ---------------EWIRRGKAAASKAKK-------------------------------------------------- 279 (530)
T ss_pred ---------------HHHHHHHhccchHHH--------------------------------------------------
Confidence 000000000000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCCCCCCC-C--CcCCcc-CCCcccEEEEEEEEECCCCCCccccc
Q 000789 985 ALTISALGVSQTSAMAPDTTKAKDSAASIFEI-LDSKPKIDSS-K--DEGMTL-SSVGGAIELRCVSFKYPTRPDVQIFR 1059 (1283)
Q Consensus 985 ~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~-~~~~~~~~~~-~--~~~~~~-~~~~g~I~~~nVsf~Y~~~~~~~vL~ 1059 (1283)
.+......+++.+- ....+..... . .-..+. ...+..++++|++++|++. .++++
T Consensus 280 ------------------a~sr~k~l~k~~~~~~~~~~~~~~~~~~~~f~~~~~~~g~~vl~~~~~~~~y~~~--~~l~~ 339 (530)
T COG0488 280 ------------------AKSRIKRLEKLEARLAEERPVEEGKPLAFRFPPPGKRLGKLVLEFENVSKGYDGG--RLLLK 339 (530)
T ss_pred ------------------HHHHHHHHHHHHhhhhhcccccccccceeeccCCcccCCCeeEEEeccccccCCC--ceeec
Confidence 00000001111110 0001110000 0 000000 1123469999999999753 57999
Q ss_pred ceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHhcceEEEccCC-CCC-hhhHHHHHh
Q 000789 1060 NLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMGLVSQEP-VLF-NETIRTNIA 1137 (1283)
Q Consensus 1060 ~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qdp-~Lf-~gTIreNl~ 1137 (1283)
++||.|.+|++||||||||+|||||+++|.|-..|.+|+|.++-. -++||.+|+. .++ +.|+-|++.
T Consensus 340 ~~s~~i~~g~riaiiG~NG~GKSTLlk~l~g~~~~~~G~v~~g~~-----------v~igyf~Q~~~~l~~~~t~~d~l~ 408 (530)
T COG0488 340 DLSFRIDRGDRIAIVGPNGAGKSTLLKLLAGELGPLSGTVKVGET-----------VKIGYFDQHRDELDPDKTVLEELS 408 (530)
T ss_pred CceEEecCCCEEEEECCCCCCHHHHHHHHhhhcccCCceEEeCCc-----------eEEEEEEehhhhcCccCcHHHHHH
Confidence 999999999999999999999999999999999999999998642 2689999998 343 448999997
Q ss_pred cCCCCCCCHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHHHHHccCCCEEEEecccCCCCHHHHHH
Q 000789 1138 YGKQGGATEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERV 1217 (1283)
Q Consensus 1138 ~g~~~~~sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiARAll~~p~ILiLDEaTSaLD~~te~~ 1217 (1283)
-.. ++..+.++...|...+...- -..++| ..||||||-|+.||+.++.+|.+|||||||.+||.+|...
T Consensus 409 ~~~-~~~~e~~~r~~L~~f~F~~~------~~~~~v----~~LSGGEk~Rl~La~ll~~~pNvLiLDEPTNhLDi~s~~a 477 (530)
T COG0488 409 EGF-PDGDEQEVRAYLGRFGFTGE------DQEKPV----GVLSGGEKARLLLAKLLLQPPNLLLLDEPTNHLDIESLEA 477 (530)
T ss_pred hhC-ccccHHHHHHHHHHcCCChH------HHhCch----hhcCHhHHHHHHHHHHhccCCCEEEEcCCCccCCHHHHHH
Confidence 542 23347888888887766432 223444 3799999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCceEEEEecCchHHhh-cCEEEEEeCCEEEEe-cChHHHHhc
Q 000789 1218 VQDALERVMVNRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQ-GSHDALMKI 1267 (1283)
Q Consensus 1218 I~~~L~~~~~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~-Gt~~eLl~~ 1267 (1283)
+.++|.++ ..|||+|||+.+.+.. |++|+++++ ++.++ |++++..+.
T Consensus 478 Le~aL~~f--~Gtvl~VSHDr~Fl~~va~~i~~~~~-~~~~~~g~y~~y~~~ 526 (530)
T COG0488 478 LEEALLDF--EGTVLLVSHDRYFLDRVATRIWLVED-KVEEFEGGYEDYLEQ 526 (530)
T ss_pred HHHHHHhC--CCeEEEEeCCHHHHHhhcceEEEEcC-ceeEcCCCHHHHHHh
Confidence 99999986 6699999999999988 999999999 88877 899888764
No 102
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=100.00 E-value=5.2e-60 Score=533.93 Aligned_cols=463 Identities=24% Similarity=0.421 Sum_probs=364.4
Q ss_pred cEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCC-HHHHhcc
Q 000789 374 EIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQ-LKWIREK 452 (1283)
Q Consensus 374 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~-~~~~r~~ 452 (1283)
.++++++++.|| ...+++||||+|++||+.||.|+||+|||||+++|.|+|+|++|+|.+||++++--+ .+..|..
T Consensus 4 ~l~~~~itK~f~---~~~And~V~l~v~~GeIHaLLGENGAGKSTLm~iL~G~~~P~~GeI~v~G~~v~~~sP~dA~~~G 80 (501)
T COG3845 4 ALEMRGITKRFP---GVVANDDVSLSVKKGEIHALLGENGAGKSTLMKILFGLYQPDSGEIRVDGKEVRIKSPRDAIRLG 80 (501)
T ss_pred eEEEeccEEEcC---CEEecCceeeeecCCcEEEEeccCCCCHHHHHHHHhCcccCCcceEEECCEEeccCCHHHHHHcC
Confidence 589999999998 356899999999999999999999999999999999999999999999999998554 5678889
Q ss_pred cEEEccCCCCCcc-cHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHhcC
Q 000789 453 IGLVSQEPILFAT-SLRENIAYGKENATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARAILKN 531 (1283)
Q Consensus 453 i~~v~Q~~~l~~~-ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARal~~~ 531 (1283)
||+|+|++.|++. ||.|||.+|.+......+........+.+..+++ |++-...+....||-||||||.|-+|||++
T Consensus 81 IGMVhQHF~Lv~~lTV~ENiiLg~e~~~~~~~~~~~~~~~i~~l~~~y--Gl~vdp~~~V~dLsVG~qQRVEIlKaLyr~ 158 (501)
T COG3845 81 IGMVHQHFMLVPTLTVAENIILGLEPSKGGLIDRRQARARIKELSERY--GLPVDPDAKVADLSVGEQQRVEILKALYRG 158 (501)
T ss_pred CcEEeeccccccccchhhhhhhcCccccccccCHHHHHHHHHHHHHHh--CCCCCccceeecCCcchhHHHHHHHHHhcC
Confidence 9999999999977 9999999998642111111222223344555665 777777788889999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHHhcCCCChhHHH
Q 000789 532 PKILLLDEATSALDAESERIVQDALVKIM-TSRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDELIKDPEGPYTQL 609 (1283)
Q Consensus 532 ~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~~~~~~~~~ 609 (1283)
|++||||||||-|-|...+.+++.++++. .|+|+|+|||++.++.. |||+-||.+|+++..-++ . .
T Consensus 159 a~iLILDEPTaVLTP~E~~~lf~~l~~l~~~G~tIi~ITHKL~Ev~~iaDrvTVLR~Gkvvgt~~~--~--~-------- 226 (501)
T COG3845 159 ARLLILDEPTAVLTPQEADELFEILRRLAAEGKTIIFITHKLKEVMAIADRVTVLRRGKVVGTVDP--V--A-------- 226 (501)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhhCeeEEEeCCeEEeeecC--C--C--------
Confidence 99999999999999999999999999986 47999999999999987 999999999998643210 0 0
Q ss_pred HHHhhcCchhhhhhhccccccCchhhhhhhhhcCCCCCCccccccccccCCCCCCccccccCCCCCCCccccccCCCCCC
Q 000789 610 VRLQEGSKEAEDALATDADKLDSSFDILDKAMTRSGSRGESMRRSISRHSSGSRHSFGFTYGVPGPINVFETEEGDQGGA 689 (1283)
Q Consensus 610 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 689 (1283)
+ . .. ++
T Consensus 227 ---------------------~----~------------------------------------------t~--~e----- 232 (501)
T COG3845 227 ---------------------E----T------------------------------------------TE--EE----- 232 (501)
T ss_pred ---------------------C----C------------------------------------------CH--HH-----
Confidence 0 0 00 00
Q ss_pred CCchhhHhhhhhHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhhhhHHHHHHHHHHHH
Q 000789 690 ERTPLMIEKRQKLSMRRLAYLNKPEFPVLLIGSIAAGIHGVIFPIFGLLLSSSIRMFFEPEDKLRKDSRFWALIYLVLGI 769 (1283)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 769 (1283)
+-+ .+.
T Consensus 233 --------------la~--------------------------------------lMv---------------------- 238 (501)
T COG3845 233 --------------LAE--------------------------------------LMV---------------------- 238 (501)
T ss_pred --------------HHH--------------------------------------Hhc----------------------
Confidence 000 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 770 INLIAVPFQNYFFGVAGGKLIRRIRSLTFEKVVHQEISWFDDPANSSGSVGARLSTDASTIRSLVGDSLALVVQNIATIA 849 (1283)
Q Consensus 770 ~~~l~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~ff~~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~~ 849 (1283)
|
T Consensus 239 -----------------------------------------------G-------------------------------- 239 (501)
T COG3845 239 -----------------------------------------------G-------------------------------- 239 (501)
T ss_pred -----------------------------------------------C--------------------------------
Confidence 0
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHHHHHHHHHH
Q 000789 850 AGLIIAFTANWILAFVILAVSPLMLVQGYTQTKFMKGFSADAKLMYEEASQVANDAVGSIRTVASFCSEEKVMDLYEKKC 929 (1283)
Q Consensus 850 ~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~ 929 (1283)
T Consensus 240 -------------------------------------------------------------------------------- 239 (501)
T COG3845 240 -------------------------------------------------------------------------------- 239 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hcHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 930 EGPLKNGVRRGILSGAGFGFSFLVLYCTNAFCFYIGSVLVEHGKATFGQVFKVFFALTISALGVSQTSAMAPDTTKAKDS 1009 (1283)
Q Consensus 930 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 1009 (1283)
.++
T Consensus 240 ------------------------------------------~~v----------------------------------- 242 (501)
T COG3845 240 ------------------------------------------REV----------------------------------- 242 (501)
T ss_pred ------------------------------------------Ccc-----------------------------------
Confidence 000
Q ss_pred HHHHHHHhccCCCCCCCCCcCCccCCCcccEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHh
Q 000789 1010 AASIFEILDSKPKIDSSKDEGMTLSSVGGAIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIE 1089 (1283)
Q Consensus 1010 ~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~ 1089 (1283)
....+ .....+ ...-++++|++..=+. ..+.+++|||+|++||.+||.|-.|-|-+.|+.+|+
T Consensus 243 -------~~~~~--~~~~~p------g~~vL~V~~L~v~~~~--~~~~v~~vs~~Vr~GEIvGIAGV~GNGQ~eL~eais 305 (501)
T COG3845 243 -------VLRVV--KPPSTP------GEVVLEVEDLSVKDRR--GVTAVKDVSFEVRAGEIVGIAGVAGNGQSELVEAIS 305 (501)
T ss_pred -------ccccc--cCCCCC------CCeEEEEeeeEeecCC--CCceeeeeeeEEecCcEEEEEecCCCCHHHHHHHHh
Confidence 00000 000000 1225899999986532 246799999999999999999999999999999999
Q ss_pred ccCCCCcceEEECCccC-CCCChHHHh-cceEEEccCCC----CChhhHHHHHhcCCCCC--------CCHHHHHHHHHH
Q 000789 1090 RFYDPDSGHVLLDNIEL-PKFKLSWLR-QQMGLVSQEPV----LFNETIRTNIAYGKQGG--------ATEEEIIAATEA 1155 (1283)
Q Consensus 1090 rl~~~~~G~I~idG~di-~~~~~~~lR-~~i~~V~Qdp~----Lf~gTIreNl~~g~~~~--------~sd~ei~~al~~ 1155 (1283)
|+..|.+|+|.++|.|+ ...+...+| ..++|||.|.+ ..+.|+.||+.++.... .+..++.+.+
T Consensus 306 Glr~~~~G~I~l~G~~v~~~~~~~~~r~~G~~~VPedR~~~Glv~~~sl~eN~vL~~~~~~~~~~~g~l~~~~i~~~a-- 383 (501)
T COG3845 306 GLRKPASGRILLNGKDVLGRLSPRERRRLGLAYVPEDRHGHGLVLDLSLAENLVLGRHDKKPFSRGGFLDRRAIRKFA-- 383 (501)
T ss_pred CCCccCCceEEECCEeccccCCHHHHHhcCCccCChhhccCccccCccHHHHhhhhhccccccccccccCHHHHHHHH--
Confidence 99999999999999997 666766665 57999999984 66889999997653211 2233443333
Q ss_pred hChHHHHHhC---CCCcccccCCCCCCCChhHHHHHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHc-CCceE
Q 000789 1156 SNAHNFISAL---PHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVM-VNRTT 1231 (1283)
Q Consensus 1156 a~l~~~I~~l---p~Gldt~vge~G~~LSgGQrQRlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~-~~~Tv 1231 (1283)
.+.++.+ +.+.++++ .+||||+.||+-+||-|.++|++||..+||-+||..+.+.|++.|.+.. +|+.|
T Consensus 384 ---~~li~~fdVr~~~~~~~a----~~LSGGNqQK~IlaREl~~~p~lLI~~qPTrGLDvgA~~~I~~~l~e~r~~G~AV 456 (501)
T COG3845 384 ---RELIEEFDVRAPSPDAPA----RSLSGGNQQKLILARELARRPDLLIAAQPTRGLDVGAIEFIHERLLELRDAGKAV 456 (501)
T ss_pred ---HHHHHHcCccCCCCCcch----hhcCCcceehhhhhhhhccCCCEEEEcCCCccccHHHHHHHHHHHHHHHhcCCEE
Confidence 2344443 34455554 4799999999999999999999999999999999999999999998875 68899
Q ss_pred EEEecCchHHhh-cCEEEEEeCCEEEEecChHH
Q 000789 1232 VVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDA 1263 (1283)
Q Consensus 1232 I~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~e 1263 (1283)
++|+-+|+.+.. ||||.||.+|+|+....+++
T Consensus 457 LLiS~dLDEil~lsDrIaVi~~Gri~~~~~~~~ 489 (501)
T COG3845 457 LLISEDLDEILELSDRIAVIYEGRIVGIVPPEE 489 (501)
T ss_pred EEEehhHHHHHHhhheeeeeeCCceeccccccc
Confidence 999999999876 99999999999998877665
No 103
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=3.4e-53 Score=475.09 Aligned_cols=238 Identities=26% Similarity=0.454 Sum_probs=224.1
Q ss_pred ccEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHhcc
Q 000789 1038 GAIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQ 1117 (1283)
Q Consensus 1038 g~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~ 1117 (1283)
|.|+|+||+++|+.. ..++|+|+||+|++||++||+|+||||||||+++|+|+++ .+|+|.+||+++..++...+|++
T Consensus 1 g~i~~~nls~~~~~~-~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~~G~I~i~g~~i~~~~~~~lr~~ 78 (275)
T cd03289 1 GQMTVKDLTAKYTEG-GNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGDIQIDGVSWNSVPLQKWRKA 78 (275)
T ss_pred CeEEEEEEEEEeCCC-CCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEhhhCCHHHHhhh
Confidence 469999999999743 3469999999999999999999999999999999999998 78999999999999999999999
Q ss_pred eEEEccCCCCChhhHHHHHhcCCCCCCCHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHHHHHccC
Q 000789 1118 MGLVSQEPVLFNETIRTNIAYGKQGGATEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKN 1197 (1283)
Q Consensus 1118 i~~V~Qdp~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiARAll~~ 1197 (1283)
|+||||+|.+|++|+++|+++. ...++++++++++.+++.+++.++|+++||.++++|.+||||||||+|||||++++
T Consensus 79 i~~v~q~~~lf~~tv~~nl~~~--~~~~~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g~~LS~G~~qrl~LaRall~~ 156 (275)
T cd03289 79 FGVIPQKVFIFSGTFRKNLDPY--GKWSDEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGGCVLSHGHKQLMCLARSVLSK 156 (275)
T ss_pred EEEECCCcccchhhHHHHhhhc--cCCCHHHHHHHHHHcCCHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHHhcC
Confidence 9999999999999999999743 23678999999999999999999999999999999999999999999999999999
Q ss_pred CCEEEEecccCCCCHHHHHHHHHHHHHHcCCceEEEEecCchHHhhcCEEEEEeCCEEEEecChHHHHhccCchhHHHHH
Q 000789 1198 PKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALMKITDGAYASLVA 1277 (1283)
Q Consensus 1198 p~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~~D~I~vl~~G~Ive~Gt~~eLl~~~~g~y~~L~~ 1277 (1283)
|+||||||||++||+++++.+++.|++.+++||+|+||||++++..||||+||++|++++.|+|++|++. .+.|++++.
T Consensus 157 p~illlDEpts~LD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~dri~vl~~G~i~~~g~~~~l~~~-~~~~~~~~~ 235 (275)
T cd03289 157 AKILLLDEPSAHLDPITYQVIRKTLKQAFADCTVILSEHRIEAMLECQRFLVIEENKVRQYDSIQKLLNE-KSHFKQAIS 235 (275)
T ss_pred CCEEEEECccccCCHHHHHHHHHHHHHhcCCCEEEEEECCHHHHHhCCEEEEecCCeEeecCCHHHHhhC-cHHHHHHHh
Confidence 9999999999999999999999999998889999999999999999999999999999999999999995 789999987
Q ss_pred Hhh
Q 000789 1278 LHV 1280 (1283)
Q Consensus 1278 ~~~ 1280 (1283)
...
T Consensus 236 ~~~ 238 (275)
T cd03289 236 PSD 238 (275)
T ss_pred hcc
Confidence 653
No 104
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=3.8e-52 Score=422.76 Aligned_cols=221 Identities=35% Similarity=0.585 Sum_probs=192.0
Q ss_pred cEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCC-CCHHHHhcc
Q 000789 374 EIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKK-LQLKWIREK 452 (1283)
Q Consensus 374 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~-~~~~~~r~~ 452 (1283)
.|+++||+++|++ ..||+|||++|++||+++|+||||||||||+++|.|+-+|++|+|.+||.++.. .+...+|++
T Consensus 2 mi~i~~l~K~fg~---~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~~G~I~i~g~~~~~~~~~~~~R~~ 78 (240)
T COG1126 2 MIEIKNLSKSFGD---KEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPDSGSITVDGEDVGDKKDILKLRRK 78 (240)
T ss_pred eEEEEeeeEEeCC---eEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCCCceEEECCEeccchhhHHHHHHh
Confidence 4899999999973 469999999999999999999999999999999999999999999999987743 378889999
Q ss_pred cEEEccCCCCCcc-cHHHHHhcCCC---CCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHH
Q 000789 453 IGLVSQEPILFAT-SLRENIAYGKE---NATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARAI 528 (1283)
Q Consensus 453 i~~v~Q~~~l~~~-ti~~ni~~~~~---~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARal 528 (1283)
+|+|+|+..||+. ||.||+.++.- ..+.++.++. +.+.++++ |+.......+.+|||||||||||||||
T Consensus 79 vGmVFQ~fnLFPHlTvleNv~lap~~v~~~~k~eA~~~-----A~~lL~~V--GL~~ka~~yP~qLSGGQqQRVAIARAL 151 (240)
T COG1126 79 VGMVFQQFNLFPHLTVLENVTLAPVKVKKLSKAEAREK-----ALELLEKV--GLADKADAYPAQLSGGQQQRVAIARAL 151 (240)
T ss_pred cCeecccccccccchHHHHHHhhhHHHcCCCHHHHHHH-----HHHHHHHc--CchhhhhhCccccCcHHHHHHHHHHHH
Confidence 9999999999976 99999998732 1233332221 12344554 666666666789999999999999999
Q ss_pred hcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC-CCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHHhcCCCC
Q 000789 529 LKNPKILLLDEATSALDAESERIVQDALVKIMT-SRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDELIKDPEG 604 (1283)
Q Consensus 529 ~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~-~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~~~~ 604 (1283)
+.+|+++|+|||||||||+...++.+.++++.+ |.|.|+|||.+.+++. ||||+.||+|+|+++|+++++..+|..
T Consensus 152 aM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~FAr~VadrviFmd~G~iie~g~p~~~f~~p~~ 229 (240)
T COG1126 152 AMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGFAREVADRVIFMDQGKIIEEGPPEEFFDNPKS 229 (240)
T ss_pred cCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHHHHHhhheEEEeeCCEEEEecCHHHHhcCCCC
Confidence 999999999999999999999999999999875 6899999999999988 999999999999999999999987543
No 105
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=5e-51 Score=414.65 Aligned_cols=219 Identities=32% Similarity=0.506 Sum_probs=196.0
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCC-CCChHHHhcc
Q 000789 1039 AIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELP-KFKLSWLRQQ 1117 (1283)
Q Consensus 1039 ~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~-~~~~~~lR~~ 1117 (1283)
-|+++||+.+|++ ..||+|||++|++||.++|+||||||||||+++|.++.+|++|+|.+||.++. ..+...+|++
T Consensus 2 mi~i~~l~K~fg~---~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~~G~I~i~g~~~~~~~~~~~~R~~ 78 (240)
T COG1126 2 MIEIKNLSKSFGD---KEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPDSGSITVDGEDVGDKKDILKLRRK 78 (240)
T ss_pred eEEEEeeeEEeCC---eEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCCCceEEECCEeccchhhHHHHHHh
Confidence 4899999999974 46999999999999999999999999999999999999999999999998763 3378899999
Q ss_pred eEEEccCCCCC-hhhHHHHHhcCCC--CCCCH----HHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHH
Q 000789 1118 MGLVSQEPVLF-NETIRTNIAYGKQ--GGATE----EEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAI 1190 (1283)
Q Consensus 1118 i~~V~Qdp~Lf-~gTIreNl~~g~~--~~~sd----~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlai 1190 (1283)
+|+|+|...|| +.|+.||+.+++. ...+. +.-.+.|+++|+.|.....|. +|||||+||+||
T Consensus 79 vGmVFQ~fnLFPHlTvleNv~lap~~v~~~~k~eA~~~A~~lL~~VGL~~ka~~yP~-----------qLSGGQqQRVAI 147 (240)
T COG1126 79 VGMVFQQFNLFPHLTVLENVTLAPVKVKKLSKAEAREKALELLEKVGLADKADAYPA-----------QLSGGQQQRVAI 147 (240)
T ss_pred cCeecccccccccchHHHHHHhhhHHHcCCCHHHHHHHHHHHHHHcCchhhhhhCcc-----------ccCcHHHHHHHH
Confidence 99999999999 5699999988732 12333 334567888899888888775 899999999999
Q ss_pred HHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHHHhcc
Q 000789 1191 ARAVLKNPKILLLDEATSALDAESERVVQDALERVM-VNRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDALMKIT 1268 (1283)
Q Consensus 1191 ARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl~~~ 1268 (1283)
||||..+|+++++|||||||||+.-.++.+.++++. .|.|.|+|||.+...++ ||||+.||+|+|+|+|+|+++..++
T Consensus 148 ARALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~FAr~VadrviFmd~G~iie~g~p~~~f~~p 227 (240)
T COG1126 148 ARALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGFAREVADRVIFMDQGKIIEEGPPEEFFDNP 227 (240)
T ss_pred HHHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHHHHHhhheEEEeeCCEEEEecCHHHHhcCC
Confidence 999999999999999999999999999999999986 46799999999999998 9999999999999999999999876
Q ss_pred Cch
Q 000789 1269 DGA 1271 (1283)
Q Consensus 1269 ~g~ 1271 (1283)
...
T Consensus 228 ~~~ 230 (240)
T COG1126 228 KSE 230 (240)
T ss_pred CCH
Confidence 543
No 106
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.9e-50 Score=426.00 Aligned_cols=220 Identities=39% Similarity=0.607 Sum_probs=191.6
Q ss_pred EEEEEEEEECCCC--CCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHH---HH
Q 000789 375 IELRDVYFRYPAR--PEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLK---WI 449 (1283)
Q Consensus 375 i~~~~v~f~y~~~--~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~---~~ 449 (1283)
|++++|++.|+.. ....+|+||||+|++||++||+|+||||||||++++.++-.|++|+|.+||+|+..++.. .+
T Consensus 2 I~l~~vsK~~~~~~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~PtsG~v~v~G~di~~l~~~~Lr~~ 81 (339)
T COG1135 2 IELENVSKTFGQTGTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPTSGSVFVDGQDLTALSEAELRQL 81 (339)
T ss_pred eEEEeeeeeeccCCCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCCCceEEEcCEecccCChHHHHHH
Confidence 7899999999752 124689999999999999999999999999999999999999999999999999887755 45
Q ss_pred hcccEEEccCCCCCc-ccHHHHHhcCCCCC--CHHH----HHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHH
Q 000789 450 REKIGLVSQEPILFA-TSLRENIAYGKENA--TDQE----IRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRI 522 (1283)
Q Consensus 450 r~~i~~v~Q~~~l~~-~ti~~ni~~~~~~~--~~~~----~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri 522 (1283)
|++||++||++.|++ .||.+|++|+.+-+ +.++ +.+.++.+ |+....+..+.+|||||||||
T Consensus 82 R~~IGMIFQhFnLLssrTV~~NvA~PLeiag~~k~ei~~RV~elLelV-----------gL~dk~~~yP~qLSGGQKQRV 150 (339)
T COG1135 82 RQKIGMIFQHFNLLSSRTVFENVAFPLELAGVPKAEIKQRVAELLELV-----------GLSDKADRYPAQLSGGQKQRV 150 (339)
T ss_pred HhhccEEeccccccccchHHhhhhhhHhhcCCCHHHHHHHHHHHHHHc-----------CChhhhccCchhcCcchhhHH
Confidence 789999999999997 69999999975422 2332 33344444 555555666689999999999
Q ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHHh
Q 000789 523 AIARAILKNPKILLLDEATSALDAESERIVQDALVKIMT--SRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDELI 599 (1283)
Q Consensus 523 aiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~ 599 (1283)
+|||||..+|+|||+|||||||||+|.+.|.+.|+++.+ +-|+++|||.++.++. |||+.||++|+|+|+|+..++.
T Consensus 151 aIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~Vvk~ic~rVavm~~G~lvE~G~v~~vF 230 (339)
T COG1135 151 AIARALANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEMEVVKRICDRVAVLDQGRLVEEGTVSEVF 230 (339)
T ss_pred HHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHhhhheEeeCCEEEEeccHHHhh
Confidence 999999999999999999999999999999999998754 6799999999999998 9999999999999999999999
Q ss_pred cCCCCh
Q 000789 600 KDPEGP 605 (1283)
Q Consensus 600 ~~~~~~ 605 (1283)
.+|...
T Consensus 231 ~~Pk~~ 236 (339)
T COG1135 231 ANPKHA 236 (339)
T ss_pred cCcchH
Confidence 886443
No 107
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.6e-49 Score=424.15 Aligned_cols=220 Identities=35% Similarity=0.557 Sum_probs=193.6
Q ss_pred EEEEEEEEECCCC--CCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCC---hHHH
Q 000789 1040 IELRCVSFKYPTR--PDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFK---LSWL 1114 (1283)
Q Consensus 1040 I~~~nVsf~Y~~~--~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~---~~~l 1114 (1283)
|++++||+.|+.. +...+|+||||+|++||+.||+|+||+|||||++++.++-+|++|+|.+||.|+..++ +..+
T Consensus 2 I~l~~vsK~~~~~~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~PtsG~v~v~G~di~~l~~~~Lr~~ 81 (339)
T COG1135 2 IELENVSKTFGQTGTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPTSGSVFVDGQDLTALSEAELRQL 81 (339)
T ss_pred eEEEeeeeeeccCCCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCCCceEEEcCEecccCChHHHHHH
Confidence 8999999999863 1246999999999999999999999999999999999999999999999999887776 5556
Q ss_pred hcceEEEccCCCCCh-hhHHHHHhcCCC-CCCCHH----HHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHH
Q 000789 1115 RQQMGLVSQEPVLFN-ETIRTNIAYGKQ-GGATEE----EIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRI 1188 (1283)
Q Consensus 1115 R~~i~~V~Qdp~Lf~-gTIreNl~~g~~-~~~sd~----ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRl 1188 (1283)
|++||+|+|++.|++ .||.+|++|... ...+.+ .+.+.|+.+|+.|...+.| .+||||||||+
T Consensus 82 R~~IGMIFQhFnLLssrTV~~NvA~PLeiag~~k~ei~~RV~elLelVgL~dk~~~yP-----------~qLSGGQKQRV 150 (339)
T COG1135 82 RQKIGMIFQHFNLLSSRTVFENVAFPLELAGVPKAEIKQRVAELLELVGLSDKADRYP-----------AQLSGGQKQRV 150 (339)
T ss_pred HhhccEEeccccccccchHHhhhhhhHhhcCCCHHHHHHHHHHHHHHcCChhhhccCc-----------hhcCcchhhHH
Confidence 789999999999997 899999997521 123444 4566777788777766655 48999999999
Q ss_pred HHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHc--CCceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHHH
Q 000789 1189 AIARAVLKNPKILLLDEATSALDAESERVVQDALERVM--VNRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDALM 1265 (1283)
Q Consensus 1189 aiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~--~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl 1265 (1283)
+|||||..+|+||++|||||||||+|.+.|.+.|++.- -|-|+++|||.++.+++ |||+.||++|+|+|+|+..++.
T Consensus 151 aIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~Vvk~ic~rVavm~~G~lvE~G~v~~vF 230 (339)
T COG1135 151 AIARALANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEMEVVKRICDRVAVLDQGRLVEEGTVSEVF 230 (339)
T ss_pred HHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHhhhheEeeCCEEEEeccHHHhh
Confidence 99999999999999999999999999999999998763 36799999999999998 9999999999999999999999
Q ss_pred hccCc
Q 000789 1266 KITDG 1270 (1283)
Q Consensus 1266 ~~~~g 1270 (1283)
.++..
T Consensus 231 ~~Pk~ 235 (339)
T COG1135 231 ANPKH 235 (339)
T ss_pred cCcch
Confidence 87644
No 108
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1e-49 Score=411.92 Aligned_cols=224 Identities=36% Similarity=0.579 Sum_probs=192.3
Q ss_pred EEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHHhcccE
Q 000789 375 IELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWIREKIG 454 (1283)
Q Consensus 375 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 454 (1283)
|+|+|||+.|.+ ..+++|+||+|++||+++++|||||||||++|+|.|+++|++|+|++||+++++++...+|++||
T Consensus 2 I~~~nvsk~y~~---~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept~G~I~i~g~~i~~~d~~~LRr~IG 78 (309)
T COG1125 2 IEFENVSKRYGN---KKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPTSGEILIDGEDISDLDPVELRRKIG 78 (309)
T ss_pred ceeeeeehhcCC---ceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCCCceEEECCeecccCCHHHHHHhhh
Confidence 789999999973 46999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEccCCCCCcc-cHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhCCCCccc--cccCCCCCCChHHHHHHHHHHHHh
Q 000789 455 LVSQEPILFAT-SLRENIAYGKE--NATDQEIRTAIELANAAKFIDKLPKGLDT--MAGEHGTQLSGGQKQRIAIARAIL 529 (1283)
Q Consensus 455 ~v~Q~~~l~~~-ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~lp~g~~t--~~~~~g~~LSgGqkqriaiARal~ 529 (1283)
||-|..-||+. ||.|||++-.. ..+.+++.+- +++.+..+ |++- .....+.+|||||+|||.+||||+
T Consensus 79 YviQqigLFPh~Tv~eNIa~VP~L~~w~k~~i~~r-----~~ELl~lv--gL~p~~~~~RyP~eLSGGQQQRVGv~RALA 151 (309)
T COG1125 79 YVIQQIGLFPHLTVAENIATVPKLLGWDKERIKKR-----ADELLDLV--GLDPSEYADRYPHELSGGQQQRVGVARALA 151 (309)
T ss_pred hhhhhcccCCCccHHHHHHhhhhhcCCCHHHHHHH-----HHHHHHHh--CCCHHHHhhcCchhcCcchhhHHHHHHHHh
Confidence 99999999975 99999997422 1233333221 12223322 4432 334455799999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhh-ccCEEEEEeCCEEeEecChhHHhcCCCChh
Q 000789 530 KNPKILLLDEATSALDAESERIVQDALVKIMT--SRTTVVVAHRLTTIR-NADLIAVVHQGKIVEKGTHDELIKDPEGPY 606 (1283)
Q Consensus 530 ~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~-~~d~i~vl~~G~i~~~g~~~~l~~~~~~~~ 606 (1283)
.+|+|+++|||++||||.++..+|+.+.++.+ ++|+|+|||++++.- -+|||.+|++|+|++.++|++++.+|...|
T Consensus 152 adP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDidEA~kLadri~vm~~G~i~Q~~~P~~il~~Pan~F 231 (309)
T COG1125 152 ADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDIDEALKLADRIAVMDAGEIVQYDTPDEILANPANDF 231 (309)
T ss_pred cCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHHHHHhhhceEEEecCCeEEEeCCHHHHHhCccHHH
Confidence 99999999999999999999999999998865 689999999999865 499999999999999999999999875555
Q ss_pred HH
Q 000789 607 TQ 608 (1283)
Q Consensus 607 ~~ 608 (1283)
-+
T Consensus 232 V~ 233 (309)
T COG1125 232 VE 233 (309)
T ss_pred HH
Confidence 43
No 109
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=9e-49 Score=439.32 Aligned_cols=237 Identities=25% Similarity=0.481 Sum_probs=219.4
Q ss_pred ccEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHHhcc
Q 000789 373 GEIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWIREK 452 (1283)
Q Consensus 373 ~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~ 452 (1283)
|.|+++||+++|++. ..++|+|+||+|++||+++|+||||||||||+++|.|+++ ++|+|++||.++..++...+|++
T Consensus 1 g~i~~~nls~~~~~~-~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~~G~I~i~g~~i~~~~~~~lr~~ 78 (275)
T cd03289 1 GQMTVKDLTAKYTEG-GNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGDIQIDGVSWNSVPLQKWRKA 78 (275)
T ss_pred CeEEEEEEEEEeCCC-CCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEhhhCCHHHHhhh
Confidence 468999999999642 3469999999999999999999999999999999999998 78999999999999999999999
Q ss_pred cEEEccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHhcCC
Q 000789 453 IGLVSQEPILFATSLRENIAYGKENATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARAILKNP 532 (1283)
Q Consensus 453 i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARal~~~~ 532 (1283)
|+||||++.+|++|+++|+.+..+ .++++++++++.+++++++..+|+|+++.++++|.+||||||||++||||++++|
T Consensus 79 i~~v~q~~~lf~~tv~~nl~~~~~-~~~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g~~LS~G~~qrl~LaRall~~p 157 (275)
T cd03289 79 FGVIPQKVFIFSGTFRKNLDPYGK-WSDEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGGCVLSHGHKQLMCLARSVLSKA 157 (275)
T ss_pred EEEECCCcccchhhHHHHhhhccC-CCHHHHHHHHHHcCCHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHHhcCC
Confidence 999999999999999999974332 4678899999999999999999999999999999999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhccCEEEEEeCCEEeEecChhHHhcCCCChhHHHHHH
Q 000789 533 KILLLDEATSALDAESERIVQDALVKIMTSRTTVVVAHRLTTIRNADLIAVVHQGKIVEKGTHDELIKDPEGPYTQLVRL 612 (1283)
Q Consensus 533 ~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~~~l~~~~~~~~~~~~~~ 612 (1283)
+||||||||++||+.+.+.+++.|++..+++|+|+||||++++..||+|++|++|++++.|++++|+++ .+.|++++..
T Consensus 158 ~illlDEpts~LD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~dri~vl~~G~i~~~g~~~~l~~~-~~~~~~~~~~ 236 (275)
T cd03289 158 KILLLDEPSAHLDPITYQVIRKTLKQAFADCTVILSEHRIEAMLECQRFLVIEENKVRQYDSIQKLLNE-KSHFKQAISP 236 (275)
T ss_pred CEEEEECccccCCHHHHHHHHHHHHHhcCCCEEEEEECCHHHHHhCCEEEEecCCeEeecCCHHHHhhC-cHHHHHHHhh
Confidence 999999999999999999999999988778999999999999988999999999999999999999986 5667776654
Q ss_pred h
Q 000789 613 Q 613 (1283)
Q Consensus 613 ~ 613 (1283)
.
T Consensus 237 ~ 237 (275)
T cd03289 237 S 237 (275)
T ss_pred c
Confidence 3
No 110
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.2e-49 Score=399.83 Aligned_cols=221 Identities=33% Similarity=0.536 Sum_probs=200.0
Q ss_pred ccEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCC-----ceEEECCcccCC--CC
Q 000789 373 GEIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDA-----GEVLIDGIDIKK--LQ 445 (1283)
Q Consensus 373 ~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~-----G~i~~~g~~~~~--~~ 445 (1283)
..++++|+++.|++ +.+|+|||++|++++++|++||||||||||++++.|..+... |+|.++|+||.+ ++
T Consensus 6 ~~~~~~~l~~yYg~---~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d 82 (253)
T COG1117 6 PAIEVRDLNLYYGD---KHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVD 82 (253)
T ss_pred ceeEecceeEEECc---hhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCC
Confidence 35899999999973 469999999999999999999999999999999999998875 999999999965 57
Q ss_pred HHHHhcccEEEccCCCCCcccHHHHHhcCCCCC------CHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHH
Q 000789 446 LKWIREKIGLVSQEPILFATSLRENIAYGKENA------TDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQK 519 (1283)
Q Consensus 446 ~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~------~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqk 519 (1283)
...+|++||+|+|.|.-|+.||+||++||..-. -++.++++++.+.+++-+.. .+.+.+..|||||+
T Consensus 83 ~~~lRr~vGMVFQkPnPFp~SIydNVayG~r~~g~~~~~ldeiVe~sLk~AaLWdEVKD-------rL~~sa~~LSGGQQ 155 (253)
T COG1117 83 VVELRRRVGMVFQKPNPFPMSIYDNVAYGLRLHGIKDKELDEIVESSLKKAALWDEVKD-------RLHKSALGLSGGQQ 155 (253)
T ss_pred HHHHHHHheeeccCCCCCCchHHHHHHHhHHhhccchHHHHHHHHHHHHHhHhHHHhHH-------HhhCCccCCChhHH
Confidence 889999999999999999999999999984311 13557889999999887654 25567889999999
Q ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHH
Q 000789 520 QRIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMTSRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDEL 598 (1283)
Q Consensus 520 qriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l 598 (1283)
||+||||||.-+|+|||||||||||||.+...|.+.|.++.++-|+|+|||.+....+ +|+..++..|+++|.|+.+++
T Consensus 156 QRLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~~yTIviVTHnmqQAaRvSD~taFf~~G~LvE~g~T~~i 235 (253)
T COG1117 156 QRLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELKKKYTIVIVTHNMQQAARVSDYTAFFYLGELVEFGPTDKI 235 (253)
T ss_pred HHHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHhccEEEEEeCCHHHHHHHhHhhhhhcccEEEEEcCHHhh
Confidence 9999999999999999999999999999999999999999988999999999999866 999999999999999999999
Q ss_pred hcCCC
Q 000789 599 IKDPE 603 (1283)
Q Consensus 599 ~~~~~ 603 (1283)
..+|.
T Consensus 236 F~~P~ 240 (253)
T COG1117 236 FTNPK 240 (253)
T ss_pred hcCcc
Confidence 98753
No 111
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-48 Score=448.93 Aligned_cols=226 Identities=28% Similarity=0.467 Sum_probs=200.0
Q ss_pred CcccEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCC-----CCcceEEECCccCC--C
Q 000789 1036 VGGAIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYD-----PDSGHVLLDNIELP--K 1108 (1283)
Q Consensus 1036 ~~g~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~-----~~~G~I~idG~di~--~ 1108 (1283)
..+.|+|+||+++|++. ..++|+|+||+|++||++||+||||||||||+++|+|+++ |++|+|.+||+++. .
T Consensus 77 ~~~~i~~~nls~~y~~~-~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~~ 155 (329)
T PRK14257 77 HANVFEIRNFNFWYMNR-TKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSKK 155 (329)
T ss_pred cCceEEEEeeEEEecCC-CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccc
Confidence 44689999999999743 3469999999999999999999999999999999999997 57999999999997 4
Q ss_pred CChHHHhcceEEEccCCCCChhhHHHHHhcCCC-CCCCHHHH-----HHHHHHhChHHHHHhCCCCcccccCCCCCCCCh
Q 000789 1109 FKLSWLRQQMGLVSQEPVLFNETIRTNIAYGKQ-GGATEEEI-----IAATEASNAHNFISALPHGYETNVGERGVQLSG 1182 (1283)
Q Consensus 1109 ~~~~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~-~~~sd~ei-----~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSg 1182 (1283)
.+...+|+.++||||+|.+|++|++|||.++.. ...++++. .++++.+++ +.++++.++++|.+|||
T Consensus 156 ~~~~~lr~~i~~v~q~~~~~~~ti~eNi~~~~~~~~~~~~~~~~~~~~~~l~~~~L-------~~~l~~~~~~~~~~LSg 228 (329)
T PRK14257 156 ISSLELRTRIGMVFQKPTPFEMSIFDNVAYGPRNNGINDRKILEKIVEKSLKSAAL-------WDEVKDDLDKAGNALSG 228 (329)
T ss_pred cchHhhhccEEEEecCCccCCCcHHHHHHhHHHhcCCChHHHHHHHHHHHHHHcCC-------cchhhhhhhCCcccCCH
Confidence 556788999999999999999999999997632 23455554 444555554 44567889999999999
Q ss_pred hHHHHHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcCCceEEEEecCchHHhh-cCEEEEEeCCEEEEecCh
Q 000789 1183 GQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSH 1261 (1283)
Q Consensus 1183 GQrQRlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~ 1261 (1283)
|||||+|||||++++|+|||||||||+||+++...+++.|+++.+++|+|+|||+++++.. ||||+||++|+|+|.|+|
T Consensus 229 GqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~~~Tii~iTH~l~~i~~~~Driivl~~G~i~e~g~~ 308 (329)
T PRK14257 229 GQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKKKYSIIIVTHSMAQAQRISDETVFFYQGWIEEAGET 308 (329)
T ss_pred HHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCH
Confidence 9999999999999999999999999999999999999999999889999999999999988 999999999999999999
Q ss_pred HHHHhccC
Q 000789 1262 DALMKITD 1269 (1283)
Q Consensus 1262 ~eLl~~~~ 1269 (1283)
+++...+.
T Consensus 309 ~~l~~~~~ 316 (329)
T PRK14257 309 KTIFIHPK 316 (329)
T ss_pred HHHhcCCC
Confidence 99987544
No 112
>KOG0927 consensus Predicted transporter (ABC superfamily) [General function prediction only]
Probab=100.00 E-value=1.4e-47 Score=433.16 Aligned_cols=199 Identities=29% Similarity=0.408 Sum_probs=164.4
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHhcce
Q 000789 1039 AIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQM 1118 (1283)
Q Consensus 1039 ~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i 1118 (1283)
.|.++||+|+|++.+ .+++++||-|.++++||+|||||+|||||+|++.|...|+.|.|.-.-.. ++
T Consensus 389 vi~~~nv~F~y~~~~--~iy~~l~fgid~~srvAlVGPNG~GKsTLlKl~~gdl~p~~G~vs~~~H~-----------~~ 455 (614)
T KOG0927|consen 389 VIMVQNVSFGYSDNP--MIYKKLNFGIDLDSRVALVGPNGAGKSTLLKLITGDLQPTIGMVSRHSHN-----------KL 455 (614)
T ss_pred eEEEeccccCCCCcc--hhhhhhhcccCcccceeEecCCCCchhhhHHHHhhccccccccccccccc-----------cc
Confidence 599999999998654 68999999999999999999999999999999999999999998654221 23
Q ss_pred EEEcc---CCCCChhhHHHHHhcCCCCCCCHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHHHHHc
Q 000789 1119 GLVSQ---EPVLFNETIRTNIAYGKQGGATEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVL 1195 (1283)
Q Consensus 1119 ~~V~Q---dp~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiARAll 1195 (1283)
++-.| +-..++.|.-|++..-..+.-+.+++...+.+.|+..-.... ++ .+||+|||.||+.||.++
T Consensus 456 ~~y~Qh~~e~ldl~~s~le~~~~~~~~~~~~e~~r~ilgrfgLtgd~q~~------p~----~~LS~Gqr~rVlFa~l~~ 525 (614)
T KOG0927|consen 456 PRYNQHLAEQLDLDKSSLEFMMPKFPDEKELEEMRSILGRFGLTGDAQVV------PM----SQLSDGQRRRVLFARLAV 525 (614)
T ss_pred hhhhhhhHhhcCcchhHHHHHHHhccccchHHHHHHHHHHhCCCcccccc------ch----hhcccccchhHHHHHHHh
Confidence 33334 334567788888864322235678888899999887443333 33 379999999999999999
Q ss_pred cCCCEEEEecccCCCCHHHHHHHHHHHHHHcCCceEEEEecCchHHhh-cCEEEEEeCCEEEEe-cChH
Q 000789 1196 KNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQ-GSHD 1262 (1283)
Q Consensus 1196 ~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~-Gt~~ 1262 (1283)
++|.||||||||++||.++-..+.++|.++ ..+||+|+|+...|.. +++|++.++|.+... |...
T Consensus 526 kqP~lLlLDEPtnhLDi~tid~laeaiNe~--~Ggvv~vSHDfrlI~qVaeEi~~c~~~~~~~~~G~i~ 592 (614)
T KOG0927|consen 526 KQPHLLLLDEPTNHLDIETIDALAEAINEF--PGGVVLVSHDFRLISQVAEEIWVCENGTVTKWDGDIE 592 (614)
T ss_pred cCCcEEEecCCCcCCCchhHHHHHHHHhcc--CCceeeeechhhHHHHHHHHhHhhccCceeecCccHH
Confidence 999999999999999999999999999986 6699999999999988 999999999988654 5443
No 113
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.9e-48 Score=391.82 Aligned_cols=221 Identities=32% Similarity=0.502 Sum_probs=199.0
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCc-----ceEEECCccCCC--CCh
Q 000789 1039 AIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDS-----GHVLLDNIELPK--FKL 1111 (1283)
Q Consensus 1039 ~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~-----G~I~idG~di~~--~~~ 1111 (1283)
.++++|+++-|.+ ..+|+|||++|++++.+|++|||||||||++++|.|+.+... |+|.+||+||.+ ++.
T Consensus 7 ~~~~~~l~~yYg~---~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d~ 83 (253)
T COG1117 7 AIEVRDLNLYYGD---KHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVDV 83 (253)
T ss_pred eeEecceeEEECc---hhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCCH
Confidence 5899999999973 469999999999999999999999999999999999999876 999999999965 679
Q ss_pred HHHhcceEEEccCCCCChhhHHHHHhcCCC-CCC----CHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHH
Q 000789 1112 SWLRQQMGLVSQEPVLFNETIRTNIAYGKQ-GGA----TEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQ 1186 (1283)
Q Consensus 1112 ~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~-~~~----sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQ 1186 (1283)
-.+|+++|+|+|.|.-|..||+||++||.. ++. -||-+..+|+.|.+||-+.. .+.+.+..|||||+|
T Consensus 84 ~~lRr~vGMVFQkPnPFp~SIydNVayG~r~~g~~~~~ldeiVe~sLk~AaLWdEVKD-------rL~~sa~~LSGGQQQ 156 (253)
T COG1117 84 VELRRRVGMVFQKPNPFPMSIYDNVAYGLRLHGIKDKELDEIVESSLKKAALWDEVKD-------RLHKSALGLSGGQQQ 156 (253)
T ss_pred HHHHHHheeeccCCCCCCchHHHHHHHhHHhhccchHHHHHHHHHHHHHhHhHHHhHH-------HhhCCccCCChhHHH
Confidence 999999999999999999999999999842 112 23557889999999998753 245567789999999
Q ss_pred HHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcCCceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHHH
Q 000789 1187 RIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDALM 1265 (1283)
Q Consensus 1187 RlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl 1265 (1283)
||||||||.-+|+|||||||||||||.+..+|.+.|.++.++-|+|+|||.+.-... +|+...+-.|+++|+|..+++.
T Consensus 157 RLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~~yTIviVTHnmqQAaRvSD~taFf~~G~LvE~g~T~~iF 236 (253)
T COG1117 157 RLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELKKKYTIVIVTHNMQQAARVSDYTAFFYLGELVEFGPTDKIF 236 (253)
T ss_pred HHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHhccEEEEEeCCHHHHHHHhHhhhhhcccEEEEEcCHHhhh
Confidence 999999999999999999999999999999999999999989999999999987655 9999999999999999999998
Q ss_pred hccC
Q 000789 1266 KITD 1269 (1283)
Q Consensus 1266 ~~~~ 1269 (1283)
.++.
T Consensus 237 ~~P~ 240 (253)
T COG1117 237 TNPK 240 (253)
T ss_pred cCcc
Confidence 7643
No 114
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=7e-48 Score=398.34 Aligned_cols=221 Identities=31% Similarity=0.511 Sum_probs=196.5
Q ss_pred EEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHhcceE
Q 000789 1040 IELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMG 1119 (1283)
Q Consensus 1040 I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~ 1119 (1283)
|+|+|||++|.+ ..+++|+||+|++||.+.++|||||||||+++++.|+++|++|+|+|||.|+++++...||++||
T Consensus 2 I~~~nvsk~y~~---~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept~G~I~i~g~~i~~~d~~~LRr~IG 78 (309)
T COG1125 2 IEFENVSKRYGN---KKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPTSGEILIDGEDISDLDPVELRRKIG 78 (309)
T ss_pred ceeeeeehhcCC---ceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCCCceEEECCeecccCCHHHHHHhhh
Confidence 799999999973 46999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEccCCCCC-hhhHHHHHhcCCC-CCCCH----HHHHHHHHHhChH--HHHHhCCCCcccccCCCCCCCChhHHHHHHHH
Q 000789 1120 LVSQEPVLF-NETIRTNIAYGKQ-GGATE----EEIIAATEASNAH--NFISALPHGYETNVGERGVQLSGGQKQRIAIA 1191 (1283)
Q Consensus 1120 ~V~Qdp~Lf-~gTIreNl~~g~~-~~~sd----~ei~~al~~a~l~--~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiA 1191 (1283)
||-|..-|| +.||.|||++-+. ...+. +++.+.++.+++. +|..+.|. .|||||+||+.+|
T Consensus 79 YviQqigLFPh~Tv~eNIa~VP~L~~w~k~~i~~r~~ELl~lvgL~p~~~~~RyP~-----------eLSGGQQQRVGv~ 147 (309)
T COG1125 79 YVIQQIGLFPHLTVAENIATVPKLLGWDKERIKKRADELLDLVGLDPSEYADRYPH-----------ELSGGQQQRVGVA 147 (309)
T ss_pred hhhhhcccCCCccHHHHHHhhhhhcCCCHHHHHHHHHHHHHHhCCCHHHHhhcCch-----------hcCcchhhHHHHH
Confidence 999999999 6799999986421 12333 4456677777775 46666664 8999999999999
Q ss_pred HHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHHHhcc
Q 000789 1192 RAVLKNPKILLLDEATSALDAESERVVQDALERVMV--NRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDALMKIT 1268 (1283)
Q Consensus 1192 RAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl~~~ 1268 (1283)
|||..+|+||++|||.+||||-+...+|+-+.++.+ ++|+|+|||+++.... +|||.||++|+|+++|+|+++++++
T Consensus 148 RALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDidEA~kLadri~vm~~G~i~Q~~~P~~il~~P 227 (309)
T COG1125 148 RALAADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDIDEALKLADRIAVMDAGEIVQYDTPDEILANP 227 (309)
T ss_pred HHHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHHHHHhhhceEEEecCCeEEEeCCHHHHHhCc
Confidence 999999999999999999999999999999987653 7899999999987655 9999999999999999999999987
Q ss_pred CchhHH
Q 000789 1269 DGAYAS 1274 (1283)
Q Consensus 1269 ~g~y~~ 1274 (1283)
...|-+
T Consensus 228 an~FV~ 233 (309)
T COG1125 228 ANDFVE 233 (309)
T ss_pred cHHHHH
Confidence 766643
No 115
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=3e-46 Score=415.05 Aligned_cols=236 Identities=51% Similarity=0.817 Sum_probs=217.9
Q ss_pred EEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHhcceE
Q 000789 1040 IELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMG 1119 (1283)
Q Consensus 1040 I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~ 1119 (1283)
|+++||+++|+.. ..++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.+||.++...+...+|+.++
T Consensus 1 i~~~~l~~~~~~~-~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (237)
T cd03252 1 ITFEHVRFRYKPD-GPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPENGRVLVDGHDLALADPAWLRRQVG 79 (237)
T ss_pred CEEEEEEEecCCC-CccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCeehHhcCHHHHhhcEE
Confidence 5789999999743 346999999999999999999999999999999999999999999999999998888888899999
Q ss_pred EEccCCCCChhhHHHHHhcCCCCCCCHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHHHHHccCCC
Q 000789 1120 LVSQEPVLFNETIRTNIAYGKQGGATEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPK 1199 (1283)
Q Consensus 1120 ~V~Qdp~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiARAll~~p~ 1199 (1283)
|+||++.+|+.|++||+.++.. ..+.+++.++++..++.+++..+|.|+++.....+.+||||||||++||||++++|+
T Consensus 80 ~~~q~~~~~~~tv~~nl~~~~~-~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~~~p~ 158 (237)
T cd03252 80 VVLQENVLFNRSIRDNIALADP-GMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQGAGLSGGQRQRIAIARALIHNPR 158 (237)
T ss_pred EEcCCchhccchHHHHhhccCC-CCCHHHHHHHHHHcCcHHHHHhCcccccchhhcCCCcCCHHHHHHHHHHHHHhhCCC
Confidence 9999999999999999987532 345677888888899999999999999999999999999999999999999999999
Q ss_pred EEEEecccCCCCHHHHHHHHHHHHHHcCCceEEEEecCchHHhhcCEEEEEeCCEEEEecChHHHHhccCchhHHHHHH
Q 000789 1200 ILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALMKITDGAYASLVAL 1278 (1283)
Q Consensus 1200 ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~~D~I~vl~~G~Ive~Gt~~eLl~~~~g~y~~L~~~ 1278 (1283)
+|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+..||+|++|++|++++.|+++++++. .+.|..++..
T Consensus 159 llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~-~~~~~~~~~~ 236 (237)
T cd03252 159 ILIFDEATSALDYESEHAIMRNMHDICAGRTVIIIAHRLSTVKNADRIIVMEKGRIVEQGSHDELLAE-NGLYAYLYQL 236 (237)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEECCEEEEEcCHHHHHhc-cChHHHHHhc
Confidence 99999999999999999999999998778999999999999988999999999999999999999986 7888887753
No 116
>COG4615 PvdE ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.7e-43 Score=383.87 Aligned_cols=470 Identities=19% Similarity=0.235 Sum_probs=355.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCccHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Q 000789 101 LYLAAGTGIAAFLQVSCWMVTGERQATRIRGLYLKTILRQDIGFFDTETTTGEVIGRMSGDTILIQEAMGEKVGKFIQLM 180 (1283)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~~~~~ll~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~ 180 (1283)
+++.++..+.+.+.......+++++..++|.++.++++.-|+.-+++- +++.++.++++|+..|. +-...++.+.+..
T Consensus 55 ~~llllf~~ss~is~lg~t~~gq~~I~klr~~~~~kil~tplerier~-~~~rlla~L~~Dvr~IS-f~~s~lp~~~qa~ 132 (546)
T COG4615 55 LGLLLLFMVSSLISQLGLTTLGQHFIYKLRSEFIKKILDTPLERIERL-GSARLLAGLTSDVRNIS-FAFSRLPELVQAI 132 (546)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHh-cccchhhhhccccccee-ehHhhhHHHHHHH
Confidence 333333444555556667788999999999999999999999999976 99999999999999998 4455678889999
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHH--HHH
Q 000789 181 STFFGGFVVALARGWFLALVLLACLPAIVIAGGSMALIMSKMSSRGQIAYSEAGTVVEQTVSGIRTVSSFTGEKQ--AIE 258 (1283)
Q Consensus 181 ~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~--~~~ 258 (1283)
+.++++++.+.++|+++.++.++.+.+.++...+...+..+.+...++..+++.+..+..++|-+..+......+ ..+
T Consensus 133 il~l~s~aYLayLSp~mf~l~vV~ivv~~~~~~~~m~rv~k~~~aare~ed~Lq~~y~~il~G~KEL~l~r~R~~~~h~~ 212 (546)
T COG4615 133 ILTLGSAAYLAYLSPKMFLLTVVWIVVTIWGGFVLMARVYKHMAAARETEDKLQNDYQTILEGRKELTLNRERAEYVHNN 212 (546)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcchhhheechHHHHHHHhh
Confidence 999999999999999998888888888888888888888888899999999999999999999999998754332 223
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 259 KYNNKLQVAYRAAVQQGMVSGIGLGVLMLTVIGTYGLAVWYGSKLIIEKGYNGGTVINVIMAIMTGGMSLGQTSPCLNAF 338 (1283)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~t~g~~~~~~~~~~~~~~~l~~~~~~~~~~ 338 (1283)
.|....+.+++..............+.+++.+....+++|+..... .-+.....++.+.++++..|+.+....++.+
T Consensus 213 ~~~~~a~~~r~~~~~~n~f~~la~~~~ni~l~~lIGlvf~lal~~~---w~st~~a~tivlvlLflr~pL~s~vgilP~l 289 (546)
T COG4615 213 LYIPDAQEYRHHIIRANTFHLLAVNWSNIMLLGLIGLVFWLALSLG---WASTNVAATIVLVLLFLRTPLLSAVGILPTL 289 (546)
T ss_pred hcCcchHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc---cchhhHHHHHHHHHHHHhhHHHHHHhhhhHH
Confidence 3333333333322222222112222333334444444444433221 1122233345555666778999998999999
Q ss_pred HHHHHHHHHHHHHHccCCCCCCCCCCCCcccCccccEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHH
Q 000789 339 AGGQAAAYKMFETIKRKPKIDPYDTSGITLEKIEGEIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKST 418 (1283)
Q Consensus 339 ~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKST 418 (1283)
.+|.+|++||.++-..++..+ ... ....+. -..|+++||.|+|+... --+..||++|++||.|-|+|.|||||||
T Consensus 290 ~~AqvA~~kiakle~~~~~a~-~~~-~q~~p~-~~~lelrnvrfay~~~~--FhvgPiNl~ikrGelvFliG~NGsGKST 364 (546)
T COG4615 290 LTAQVAFNKIAKLELAPYKAD-FPR-PQAFPD-WKTLELRNVRFAYQDNA--FHVGPINLTIKRGELVFLIGGNGSGKST 364 (546)
T ss_pred HHHHHHHHHHHHhhcCCcccc-CCC-CCcCCc-ccceeeeeeeeccCccc--ceecceeeEEecCcEEEEECCCCCcHHH
Confidence 999999999988654332221 111 111222 24699999999997432 3578899999999999999999999999
Q ss_pred HHHHHHcCCCCCCceEEECCcccCCCCHHHHhcccEEEccCCCCCcccHHHHHhcCCCC-CCHHHHHHHHHHhcHHHHHH
Q 000789 419 VISLVERFYDPDAGEVLIDGIDIKKLQLKWIREKIGLVSQEPILFATSLRENIAYGKEN-ATDQEIRTAIELANAAKFID 497 (1283)
Q Consensus 419 l~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~-~~~~~~~~~~~~~~~~~~i~ 497 (1283)
++++|.|+|+|++|+|++||.+++.-+++..|+-++-|+-|.|||+.++ |.+. ++++.+..-++...+.....
T Consensus 365 ~~~LLtGL~~PqsG~I~ldg~pV~~e~ledYR~LfSavFsDyhLF~~ll------~~e~~as~q~i~~~LqrLel~~kts 438 (546)
T COG4615 365 LAMLLTGLYQPQSGEILLDGKPVSAEQLEDYRKLFSAVFSDYHLFDQLL------GPEGKASPQLIEKWLQRLELAHKTS 438 (546)
T ss_pred HHHHHhcccCCCCCceeECCccCCCCCHHHHHHHHHHHhhhHhhhHhhh------CCccCCChHHHHHHHHHHHHhhhhc
Confidence 9999999999999999999999999999999999999999999998765 4333 56666665555544433221
Q ss_pred hCCCCccccccCCCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc--CCCeEEEEecCchhh
Q 000789 498 KLPKGLDTMAGEHGTQLSGGQKQRIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIM--TSRTTVVVAHRLTTI 575 (1283)
Q Consensus 498 ~lp~g~~t~~~~~g~~LSgGqkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~ 575 (1283)
+-+|-= ....||-|||.|+|+--|++-+.||++|||=-+--||.=++.+.+.+.-+. .|||++.||||-...
T Consensus 439 -l~d~~f-----s~~kLStGQkKRlAll~AllEeR~Ilv~DEWAADQDPaFRR~FY~~lLp~LK~qGKTI~aIsHDd~YF 512 (546)
T COG4615 439 -LNDGRF-----SNLKLSTGQKKRLALLLALLEERDILVLDEWAADQDPAFRREFYQVLLPLLKEQGKTIFAISHDDHYF 512 (546)
T ss_pred -ccCCcc-----cccccccchHHHHHHHHHHHhhCCeEEeehhhccCChHHHHHHHHHHhHHHHHhCCeEEEEecCchhh
Confidence 111111 124799999999999999999999999999999999999999988776543 489999999999999
Q ss_pred hccCEEEEEeCCEEeEe
Q 000789 576 RNADLIAVVHQGKIVEK 592 (1283)
Q Consensus 576 ~~~d~i~vl~~G~i~~~ 592 (1283)
..|||++.|++|+++|.
T Consensus 513 ~~ADrll~~~~G~~~e~ 529 (546)
T COG4615 513 IHADRLLEMRNGQLSEL 529 (546)
T ss_pred hhHHHHHHHhcCceeec
Confidence 99999999999999975
No 117
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=5e-46 Score=417.36 Aligned_cols=241 Identities=31% Similarity=0.563 Sum_probs=223.3
Q ss_pred CcccEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHh
Q 000789 1036 VGGAIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLR 1115 (1283)
Q Consensus 1036 ~~g~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR 1115 (1283)
..|.|+++|++++|+.. ..++|+|+||+|+|||++||+|+||||||||+++|+|+++|++|+|.+||.++.+.+...+|
T Consensus 16 ~~~~i~~~~l~~~~~~~-~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~ 94 (257)
T cd03288 16 LGGEIKIHDLCVRYENN-LKPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPLHTLR 94 (257)
T ss_pred CCceEEEEEEEEEeCCC-CCcceeEEEEEEcCCCEEEEECCCCCCHHHHHHHHHcccCCCCCeEEECCEEhhhCCHHHHh
Confidence 46789999999999743 24699999999999999999999999999999999999999999999999999988888899
Q ss_pred cceEEEccCCCCChhhHHHHHhcCCCCCCCHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHHHHHc
Q 000789 1116 QQMGLVSQEPVLFNETIRTNIAYGKQGGATEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVL 1195 (1283)
Q Consensus 1116 ~~i~~V~Qdp~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiARAll 1195 (1283)
+.++||+|+|.+|++|++||+.+.. ...+++++++++.+++.+++..+|.|+++.+++.+.+||||||||++||||++
T Consensus 95 ~~i~~v~q~~~l~~~tv~~nl~~~~--~~~~~~~~~~l~~~~l~~~~~~~~~~l~~~~~~~~~~LS~G~~qrl~laral~ 172 (257)
T cd03288 95 SRLSIILQDPILFSGSIRFNLDPEC--KCTDDRLWEALEIAQLKNMVKSLPGGLDAVVTEGGENFSVGQRQLFCLARAFV 172 (257)
T ss_pred hhEEEECCCCcccccHHHHhcCcCC--CCCHHHHHHHHHHhCcHHHHhhcccccCcEeccCCCcCCHHHHHHHHHHHHHh
Confidence 9999999999999999999997642 23566788899999999999999999999999999999999999999999999
Q ss_pred cCCCEEEEecccCCCCHHHHHHHHHHHHHHcCCceEEEEecCchHHhhcCEEEEEeCCEEEEecChHHHHhccCchhHHH
Q 000789 1196 KNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALMKITDGAYASL 1275 (1283)
Q Consensus 1196 ~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~~D~I~vl~~G~Ive~Gt~~eLl~~~~g~y~~L 1275 (1283)
++|++|||||||++||++++..+.+.+++..+++|+|++||+++.+..||+|++|++|++++.|+++++.+..++.|+.+
T Consensus 173 ~~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~~~~~~~~~ 252 (257)
T cd03288 173 RKSSILIMDEATASIDMATENILQKVVMTAFADRTVVTIAHRVSTILDADLVLVLSRGILVECDTPENLLAQEDGVFASL 252 (257)
T ss_pred cCCCEEEEeCCccCCCHHHHHHHHHHHHHhcCCCEEEEEecChHHHHhCCEEEEEECCEEEEeCCHHHHHhccchHHHHH
Confidence 99999999999999999999999999998777899999999999999999999999999999999999998767889888
Q ss_pred HHHh
Q 000789 1276 VALH 1279 (1283)
Q Consensus 1276 ~~~~ 1279 (1283)
+..+
T Consensus 253 ~~~~ 256 (257)
T cd03288 253 VRTD 256 (257)
T ss_pred Hhcc
Confidence 7654
No 118
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.8e-45 Score=455.49 Aligned_cols=200 Identities=25% Similarity=0.376 Sum_probs=168.8
Q ss_pred CcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCC--CCcceEEECCccCCCCChHHHhcceEEEccCC-CCChh
Q 000789 1054 DVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYD--PDSGHVLLDNIELPKFKLSWLRQQMGLVSQEP-VLFNE 1130 (1283)
Q Consensus 1054 ~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~--~~~G~I~idG~di~~~~~~~lR~~i~~V~Qdp-~Lf~g 1130 (1283)
....|+|||=-++||-.+|++|+||||||||++.|++--. ..+|+|+|||.+..+ +..++.+|||.|++ ++-.-
T Consensus 803 ~~qLL~~V~G~~kPG~LTALMG~SGAGKTTLLdvLA~R~t~G~I~Gdi~i~G~p~~q---~tF~R~~GYvqQ~DiH~~~~ 879 (1391)
T KOG0065|consen 803 TRQLLNNVSGAFKPGVLTALMGESGAGKTTLLDVLAGRKTGGYIEGDILISGFPKDQ---ETFARVSGYVEQQDIHSPEL 879 (1391)
T ss_pred ceEhhhcCceEecCCceeehhcCCCCchHHHHHHHhcCcccceEEeEEEECCeeCch---hhhccccceeecccccCccc
Confidence 3468999999999999999999999999999999999754 357999999998765 68899999999977 56677
Q ss_pred hHHHHHhcCC----CCCCCHHH----HHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHHHHHccCC-CEE
Q 000789 1131 TIRTNIAYGK----QGGATEEE----IIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNP-KIL 1201 (1283)
Q Consensus 1131 TIreNl~~g~----~~~~sd~e----i~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiARAll~~p-~IL 1201 (1283)
||||-|.|.. +.+.+++| +.++.+..++.++ -|..||.-|..||..||.||.||=-|+.|| .||
T Consensus 880 TVrESL~fSA~LRlp~~v~~~ek~~yVe~Vi~lleL~~~-------~daiVG~~G~GLs~eQRKrLTIgVELvA~P~~il 952 (1391)
T KOG0065|consen 880 TVRESLRFSAALRLPKEVSDEEKYEYVEEVIELLELKEY-------ADALVGLPGSGLSTEQRKRLTIGVELVANPSSIL 952 (1391)
T ss_pred chHHHHHHHHHHcCCCcCCHHHHHHHHHHHHHHhCchhh-------hhhhccCCCCCCCHHHhceeeEEEEEecCCceeE
Confidence 9999997651 23455544 4455555555444 456789989999999999999999999999 999
Q ss_pred EEecccCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchH--HhhcCEEEEEe-CCEEEEecChHH
Q 000789 1202 LLDEATSALDAESERVVQDALERVM-VNRTTVVVAHRLTT--IKNADIIAVVK-NGVIAEQGSHDA 1263 (1283)
Q Consensus 1202 iLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHrl~t--i~~~D~I~vl~-~G~Ive~Gt~~e 1263 (1283)
.||||||+||+++...|.+.++++. .|+||++.-|.+|. .+..|+++.|+ +|+.+.+|+..+
T Consensus 953 FLDEPTSGLDsqaA~~i~~~lrkla~tGqtIlCTIHQPS~~ife~FD~LLLLkrGGqtVY~G~lG~ 1018 (1391)
T KOG0065|consen 953 FLDEPTSGLDSQAAAIVMRFLRKLADTGQTILCTIHQPSIDIFEAFDELLLLKRGGQTVYFGPLGE 1018 (1391)
T ss_pred EecCCCCCccHHHHHHHHHHHHHHHhcCCeEEEEecCCcHHHHHHHhHHHHHhcCCeEEEecCccc
Confidence 9999999999999999999999975 68999999999985 36699999995 689999987543
No 119
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-46 Score=429.91 Aligned_cols=225 Identities=29% Similarity=0.511 Sum_probs=196.7
Q ss_pred ccccEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCC-----CCCceEEECCcccCC--
Q 000789 371 IEGEIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYD-----PDAGEVLIDGIDIKK-- 443 (1283)
Q Consensus 371 ~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~~~g~~~~~-- 443 (1283)
..+.|+++|++|+|++. ..++|+|+||+|++||++||+||||||||||+++|+|+++ |++|+|.+||+++..
T Consensus 77 ~~~~i~~~nls~~y~~~-~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~~ 155 (329)
T PRK14257 77 HANVFEIRNFNFWYMNR-TKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSKK 155 (329)
T ss_pred cCceEEEEeeEEEecCC-CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccc
Confidence 45689999999999642 3469999999999999999999999999999999999996 579999999999974
Q ss_pred CCHHHHhcccEEEccCCCCCcccHHHHHhcCCC--CCCHHHH-----HHHHHHhcHHHHHHhCCCCccccccCCCCCCCh
Q 000789 444 LQLKWIREKIGLVSQEPILFATSLRENIAYGKE--NATDQEI-----RTAIELANAAKFIDKLPKGLDTMAGEHGTQLSG 516 (1283)
Q Consensus 444 ~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~--~~~~~~~-----~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSg 516 (1283)
.+...+|+.++||||+|++|++|++|||.|+.. ..++++. .++++.++ +++++++.++++|.+|||
T Consensus 156 ~~~~~lr~~i~~v~q~~~~~~~ti~eNi~~~~~~~~~~~~~~~~~~~~~~l~~~~-------L~~~l~~~~~~~~~~LSg 228 (329)
T PRK14257 156 ISSLELRTRIGMVFQKPTPFEMSIFDNVAYGPRNNGINDRKILEKIVEKSLKSAA-------LWDEVKDDLDKAGNALSG 228 (329)
T ss_pred cchHhhhccEEEEecCCccCCCcHHHHHHhHHHhcCCChHHHHHHHHHHHHHHcC-------CcchhhhhhhCCcccCCH
Confidence 455678899999999999999999999998642 1233332 33344433 344667889999999999
Q ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhc-cCEEEEEeCCEEeEecCh
Q 000789 517 GQKQRIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMTSRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTH 595 (1283)
Q Consensus 517 GqkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~ 595 (1283)
|||||++||||++++|+|||||||||+||+++.+.+++.|+++.+++|+|+|||+++++.. ||+|+||++|+|++.|++
T Consensus 229 GqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~~~Tii~iTH~l~~i~~~~Driivl~~G~i~e~g~~ 308 (329)
T PRK14257 229 GQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKKKYSIIIVTHSMAQAQRISDETVFFYQGWIEEAGET 308 (329)
T ss_pred HHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCH
Confidence 9999999999999999999999999999999999999999998888999999999999987 999999999999999999
Q ss_pred hHHhcCCC
Q 000789 596 DELIKDPE 603 (1283)
Q Consensus 596 ~~l~~~~~ 603 (1283)
+++...+.
T Consensus 309 ~~l~~~~~ 316 (329)
T PRK14257 309 KTIFIHPK 316 (329)
T ss_pred HHHhcCCC
Confidence 99987643
No 120
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=5.1e-46 Score=384.11 Aligned_cols=222 Identities=36% Similarity=0.578 Sum_probs=190.3
Q ss_pred ccEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHH---HH
Q 000789 373 GEIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLK---WI 449 (1283)
Q Consensus 373 ~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~---~~ 449 (1283)
..|++++|+|+|++ +.+++||||+|++||+++|+||||||||||+++|.|+..|++|+|.++|+|+.+++.+ .+
T Consensus 7 ~~I~vr~v~~~fG~---~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~~GeI~i~G~~i~~ls~~~~~~i 83 (263)
T COG1127 7 PLIEVRGVTKSFGD---RVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPDKGEILIDGEDIPQLSEEELYEI 83 (263)
T ss_pred ceEEEeeeeeecCC---EEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCCCCeEEEcCcchhccCHHHHHHH
Confidence 36999999999964 4699999999999999999999999999999999999999999999999999888754 56
Q ss_pred hcccEEEccCCCCCcc-cHHHHHhcCCCC---CCHHHHHHHHHHhcHHHHHHhCCCCcccc-ccCCCCCCChHHHHHHHH
Q 000789 450 REKIGLVSQEPILFAT-SLRENIAYGKEN---ATDQEIRTAIELANAAKFIDKLPKGLDTM-AGEHGTQLSGGQKQRIAI 524 (1283)
Q Consensus 450 r~~i~~v~Q~~~l~~~-ti~~ni~~~~~~---~~~~~~~~~~~~~~~~~~i~~lp~g~~t~-~~~~g~~LSgGqkqriai 524 (1283)
|+++|+++|...||+. ||+||+.|...+ .+++.+++.+. ..++.. |+... ....+++||||++.|+||
T Consensus 84 r~r~GvlFQ~gALFssltV~eNVafplre~~~lp~~~i~~lv~-----~KL~~V--GL~~~~~~~~PsELSGGM~KRvaL 156 (263)
T COG1127 84 RKRMGVLFQQGALFSSLTVFENVAFPLREHTKLPESLIRELVL-----MKLELV--GLRGAAADLYPSELSGGMRKRVAL 156 (263)
T ss_pred HhheeEEeeccccccccchhHhhheehHhhccCCHHHHHHHHH-----HHHHhc--CCChhhhhhCchhhcchHHHHHHH
Confidence 8999999999999987 999999996433 23444433221 112222 55444 233467999999999999
Q ss_pred HHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHHhcC
Q 000789 525 ARAILKNPKILLLDEATSALDAESERIVQDALVKIMT--SRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDELIKD 601 (1283)
Q Consensus 525 ARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~ 601 (1283)
|||+..||+|+++|||||+|||.+...+.+.|+++.+ +.|+|+|||+++++.. ||+|+++.+|+|+..|+++|+.+.
T Consensus 157 ARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~s~~~i~Drv~~L~~gkv~~~Gt~~el~~s 236 (263)
T COG1127 157 ARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLDSLLTIADRVAVLADGKVIAEGTPEELLAS 236 (263)
T ss_pred HHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChHHHHhhhceEEEEeCCEEEEeCCHHHHHhC
Confidence 9999999999999999999999999999999998865 6899999999999876 999999999999999999999987
Q ss_pred CCC
Q 000789 602 PEG 604 (1283)
Q Consensus 602 ~~~ 604 (1283)
.+.
T Consensus 237 d~P 239 (263)
T COG1127 237 DDP 239 (263)
T ss_pred CCH
Confidence 443
No 121
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=1.8e-45 Score=408.77 Aligned_cols=234 Identities=47% Similarity=0.796 Sum_probs=214.6
Q ss_pred EEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHHhcccE
Q 000789 375 IELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWIREKIG 454 (1283)
Q Consensus 375 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 454 (1283)
|+++||+++|++. ..++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.++
T Consensus 1 i~~~~l~~~~~~~-~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (237)
T cd03252 1 ITFEHVRFRYKPD-GPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPENGRVLVDGHDLALADPAWLRRQVG 79 (237)
T ss_pred CEEEEEEEecCCC-CccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCeehHhcCHHHHhhcEE
Confidence 4789999999642 246999999999999999999999999999999999999999999999999998877778888999
Q ss_pred EEccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHhcCCCE
Q 000789 455 LVSQEPILFATSLRENIAYGKENATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARAILKNPKI 534 (1283)
Q Consensus 455 ~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARal~~~~~i 534 (1283)
|++|++++|+.|+.||+.++.+....+++.++++..++.++++.+|.|+++..+..+.+||||||||++|||||+.+|++
T Consensus 80 ~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~~~p~l 159 (237)
T cd03252 80 VVLQENVLFNRSIRDNIALADPGMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQGAGLSGGQRQRIAIARALIHNPRI 159 (237)
T ss_pred EEcCCchhccchHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhhcCCCcCCHHHHHHHHHHHHHhhCCCE
Confidence 99999999999999999987654455667777888888999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhccCEEEEEeCCEEeEecChhHHhcCCCChhHHHH
Q 000789 535 LLLDEATSALDAESERIVQDALVKIMTSRTTVVVAHRLTTIRNADLIAVVHQGKIVEKGTHDELIKDPEGPYTQLV 610 (1283)
Q Consensus 535 lllDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~~~l~~~~~~~~~~~~ 610 (1283)
|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+..||+|++|++|++++.|++++++.+ .+.|..++
T Consensus 160 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~-~~~~~~~~ 234 (237)
T cd03252 160 LIFDEATSALDYESEHAIMRNMHDICAGRTVIIIAHRLSTVKNADRIIVMEKGRIVEQGSHDELLAE-NGLYAYLY 234 (237)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEECCEEEEEcCHHHHHhc-cChHHHHH
Confidence 9999999999999999999999998778999999999999988999999999999999999999876 66776654
No 122
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=7.4e-46 Score=414.72 Aligned_cols=218 Identities=33% Similarity=0.577 Sum_probs=194.5
Q ss_pred cEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHHhccc
Q 000789 374 EIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWIREKI 453 (1283)
Q Consensus 374 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 453 (1283)
.|+++||++.|++. .+++|+||+|++||+++|+|||||||||+|++|+|+.+|++|+|.|||.+++++++.. +.|
T Consensus 3 ~i~l~~v~K~yg~~---~~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~~G~I~i~g~~vt~l~P~~--R~i 77 (338)
T COG3839 3 ELELKNVRKSFGSF---EVLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPTSGEILIDGRDVTDLPPEK--RGI 77 (338)
T ss_pred EEEEeeeEEEcCCc---eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhH--CCE
Confidence 58999999999742 2899999999999999999999999999999999999999999999999999998875 689
Q ss_pred EEEccCCCCCcc-cHHHHHhcCCCCC------CHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHH
Q 000789 454 GLVSQEPILFAT-SLRENIAYGKENA------TDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIAR 526 (1283)
Q Consensus 454 ~~v~Q~~~l~~~-ti~~ni~~~~~~~------~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiAR 526 (1283)
|+|||+..||+. ||+|||+|+.... .++++.++++..++.+.+++.| .+|||||||||||||
T Consensus 78 amVFQ~yALyPhmtV~~Niaf~Lk~~~~~k~ei~~rV~eva~~L~l~~lL~r~P-----------~~LSGGQrQRVAlaR 146 (338)
T COG3839 78 AMVFQNYALYPHMTVYENIAFGLKLRGVPKAEIDKRVKEVAKLLGLEHLLNRKP-----------LQLSGGQRQRVALAR 146 (338)
T ss_pred EEEeCCccccCCCcHHHHhhhhhhhCCCchHHHHHHHHHHHHHcCChhHHhcCc-----------ccCChhhHHHHHHHH
Confidence 999999999976 9999999986532 2456677777777666666655 699999999999999
Q ss_pred HHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHHhcCCC
Q 000789 527 AILKNPKILLLDEATSALDAESERIVQDALVKIMT--SRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDELIKDPE 603 (1283)
Q Consensus 527 al~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~~~ 603 (1283)
||+++|+++|||||+|+||++.+..+...|+++.+ +.|+|+||||..++.. ||||+||++|+|.+.|++.|+..+|.
T Consensus 147 AlVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q~g~p~ely~~P~ 226 (338)
T COG3839 147 ALVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQVGTPLELYERPA 226 (338)
T ss_pred HHhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHHHHHhhCCEEEEEeCCeeeecCChHHHhhCcc
Confidence 99999999999999999999999999999998765 5799999999998865 99999999999999999999998865
Q ss_pred ChhH
Q 000789 604 GPYT 607 (1283)
Q Consensus 604 ~~~~ 607 (1283)
..+-
T Consensus 227 n~fV 230 (338)
T COG3839 227 NLFV 230 (338)
T ss_pred chhh
Confidence 5443
No 123
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=1.7e-45 Score=361.42 Aligned_cols=209 Identities=34% Similarity=0.585 Sum_probs=188.6
Q ss_pred EEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHHhcccE
Q 000789 375 IELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWIREKIG 454 (1283)
Q Consensus 375 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 454 (1283)
|.+++|.|+|...+ =.++++|++||++||+||||||||||+|+|+||..|.+|+|.|+|+|....++. ++-++
T Consensus 2 l~L~~V~~~y~~~~-----~~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~~G~i~i~g~d~t~~~P~--~RPVS 74 (231)
T COG3840 2 LALDDVRFSYGHLP-----MRFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPASGEILINGVDHTASPPA--ERPVS 74 (231)
T ss_pred ccccceEEeeCcce-----EEEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCCCceEEEcCeecCcCCcc--cCChh
Confidence 56789999996422 368999999999999999999999999999999999999999999999877665 35699
Q ss_pred EEccCCCCCcc-cHHHHHhcCCC-C-----CCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHH
Q 000789 455 LVSQEPILFAT-SLRENIAYGKE-N-----ATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARA 527 (1283)
Q Consensus 455 ~v~Q~~~l~~~-ti~~ni~~~~~-~-----~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARa 527 (1283)
+++||..||.- ||++||.+|.. . ...+.+..++..+++.+|.+++|. +||||||||+||||+
T Consensus 75 mlFQEnNLFaHLtV~qNigLGl~P~LkL~a~~r~~v~~aa~~vGl~~~~~RLP~-----------~LSGGqRQRvALARc 143 (231)
T COG3840 75 MLFQENNLFAHLTVAQNIGLGLSPGLKLNAEQREKVEAAAAQVGLAGFLKRLPG-----------ELSGGQRQRVALARC 143 (231)
T ss_pred hhhhccccchhhhhhhhhcccCCcccccCHHHHHHHHHHHHHhChhhHhhhCcc-----------ccCchHHHHHHHHHH
Confidence 99999999976 99999999953 2 134678899999999999999985 899999999999999
Q ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHHhcC
Q 000789 528 ILKNPKILLLDEATSALDAESERIVQDALVKIMT--SRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDELIKD 601 (1283)
Q Consensus 528 l~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~ 601 (1283)
|+++-+||+||||+|+|||.-+.++...+.++.. +.|+++|||.++.++. +|+++++++|||.++|+.++++..
T Consensus 144 lvR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~TllmVTH~~~Da~~ia~~~~fl~~Gri~~~g~~~~~~~~ 220 (231)
T COG3840 144 LVREQPILLLDEPFSALDPALRAEMLALVSQLCDERKMTLLMVTHHPEDAARIADRVVFLDNGRIAAQGSTQELLSG 220 (231)
T ss_pred HhccCCeEEecCchhhcCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHHhhhceEEEeCCEEEeeccHHHHhcc
Confidence 9999999999999999999999999999988864 5799999999999876 999999999999999999999865
No 124
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=1.1e-45 Score=398.28 Aligned_cols=214 Identities=34% Similarity=0.553 Sum_probs=190.5
Q ss_pred cEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHHhccc
Q 000789 374 EIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWIREKI 453 (1283)
Q Consensus 374 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 453 (1283)
.++++|++|+|++ +++|+|+||++++||+++|+||||||||||+|+|+|+++|.+|+|++||+++.+++.+++.+++
T Consensus 2 ~L~~~~ls~~y~~---~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~~G~V~l~g~~i~~~~~kelAk~i 78 (258)
T COG1120 2 MLEVENLSFGYGG---KPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPKSGEVLLDGKDIASLSPKELAKKL 78 (258)
T ss_pred eeEEEEEEEEECC---eeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCCchhhcCHHHHhhhE
Confidence 4789999999973 4699999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEccCCC-CCcccHHHHHhcCCCC-------CC---HHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHH
Q 000789 454 GLVSQEPI-LFATSLRENIAYGKEN-------AT---DQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRI 522 (1283)
Q Consensus 454 ~~v~Q~~~-l~~~ti~~ni~~~~~~-------~~---~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri 522 (1283)
|||||++. -|.-||+|-+.+|+.. .+ .+.+.++++..++.++..+ .-..||||||||+
T Consensus 79 a~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la~r-----------~~~~LSGGerQrv 147 (258)
T COG1120 79 AYVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLADR-----------PVDELSGGERQRV 147 (258)
T ss_pred EEeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHhcC-----------cccccChhHHHHH
Confidence 99999975 4566999999999632 12 2246667777766665443 4468999999999
Q ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhh-ccCEEEEEeCCEEeEecChhHHh
Q 000789 523 AIARAILKNPKILLLDEATSALDAESERIVQDALVKIMT--SRTTVVVAHRLTTIR-NADLIAVVHQGKIVEKGTHDELI 599 (1283)
Q Consensus 523 aiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~-~~d~i~vl~~G~i~~~g~~~~l~ 599 (1283)
.|||||+++|+||+||||||+||.....++++.++++.+ ++|+|+|.|+++... .||++++|++|+|+.+|+++|.+
T Consensus 148 ~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~A~ryad~~i~lk~G~i~a~G~p~evl 227 (258)
T COG1120 148 LIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNLAARYADHLILLKDGKIVAQGTPEEVL 227 (258)
T ss_pred HHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEeecCcchhc
Confidence 999999999999999999999999999999999999863 689999999999864 59999999999999999999988
Q ss_pred cC
Q 000789 600 KD 601 (1283)
Q Consensus 600 ~~ 601 (1283)
..
T Consensus 228 T~ 229 (258)
T COG1120 228 TE 229 (258)
T ss_pred CH
Confidence 64
No 125
>KOG0062 consensus ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b [Amino acid transport and metabolism; Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=6.2e-45 Score=409.65 Aligned_cols=210 Identities=28% Similarity=0.388 Sum_probs=169.9
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHhcce
Q 000789 1039 AIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQM 1118 (1283)
Q Consensus 1039 ~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i 1118 (1283)
.+++.+|+|.|+.. +++.+++++++++.-+++++||++|+||||+++++.+-..|..|.+.+.+ |.+|
T Consensus 362 ~l~i~~V~f~y~p~-~y~~~~~~~~d~e~~sRi~~vg~ng~gkst~lKi~~~~l~~~rgi~~~~~-----------r~ri 429 (582)
T KOG0062|consen 362 NLRISYVAFEYTPS-EYQWRKQLGLDRESDSRISRVGENGDGKSTLLKILKGDLTPTRGIVGRHP-----------RLRI 429 (582)
T ss_pred eeEEEeeeccCCCc-chhhhhccCCccchhhhhheeccCchhHHHHHHHHhccCCcccceeeecc-----------ccee
Confidence 69999999999754 23799999999999999999999999999999999999999999998876 7789
Q ss_pred EEEccCCCC-ChhhHHHHHhc-CCCCCCCHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHHHHHcc
Q 000789 1119 GLVSQEPVL-FNETIRTNIAY-GKQGGATEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLK 1196 (1283)
Q Consensus 1119 ~~V~Qdp~L-f~gTIreNl~~-g~~~~~sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiARAll~ 1196 (1283)
+|-.|.-+= ++-.+-+=-.+ ...+..+++|+.+.|...|+..-+...+ -..||||||=|+++|-....
T Consensus 430 ~~f~Qhhvd~l~~~v~~vd~~~~~~pG~~~ee~r~hl~~~Gl~g~la~~s----------i~~LSGGQKsrvafA~~~~~ 499 (582)
T KOG0062|consen 430 KYFAQHHVDFLDKNVNAVDFMEKSFPGKTEEEIRRHLGSFGLSGELALQS----------IASLSGGQKSRVAFAACTWN 499 (582)
T ss_pred cchhHhhhhHHHHHhHHHHHHHHhCCCCCHHHHHHHHHhcCCCchhhhcc----------ccccCCcchhHHHHHHHhcC
Confidence 999997653 33332211110 0123458999999998877654443221 24699999999999999999
Q ss_pred CCCEEEEecccCCCCHHHHHHHHHHHHHHcCCceEEEEecCchHHhh-cCEEEEEeCCEEEEe-cChHHHHhccCchhHH
Q 000789 1197 NPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQ-GSHDALMKITDGAYAS 1274 (1283)
Q Consensus 1197 ~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~-Gt~~eLl~~~~g~y~~ 1274 (1283)
+|.+|+|||||.+||.++-..+-++|+.. +.-||+|||+.+.+.. |+.++|.++|+|.-. |+- ..|.+
T Consensus 500 ~PhlLVLDEPTNhLD~dsl~AL~~Al~~F--~GGVv~VSHd~~fi~~~c~E~Wvve~g~vt~ieg~~--------~~yKk 569 (582)
T KOG0062|consen 500 NPHLLVLDEPTNHLDRDSLGALAKALKNF--NGGVVLVSHDEEFISSLCKELWVVEDGKVTPIEGGI--------DKYKK 569 (582)
T ss_pred CCcEEEecCCCccccHHHHHHHHHHHHhc--CCcEEEEECcHHHHhhcCceeEEEcCCcEEeeeccH--------HHHHH
Confidence 99999999999999999999999999875 5689999999999988 999999999999763 221 13666
Q ss_pred HHHHhh
Q 000789 1275 LVALHV 1280 (1283)
Q Consensus 1275 L~~~~~ 1280 (1283)
+...+.
T Consensus 570 l~~~e~ 575 (582)
T KOG0062|consen 570 LLGAEL 575 (582)
T ss_pred HHHHHH
Confidence 665553
No 126
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=1e-45 Score=366.77 Aligned_cols=207 Identities=30% Similarity=0.524 Sum_probs=185.4
Q ss_pred EEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCC---HHHHhc
Q 000789 375 IELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQ---LKWIRE 451 (1283)
Q Consensus 375 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~---~~~~r~ 451 (1283)
|+|+||++.|++. .++|+||||+|++||++-|+||||||||||+|+|.+...|+.|+|.++|.|+..+. ...+|+
T Consensus 2 I~f~~V~k~Y~~g--~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt~G~i~~~~~dl~~l~~~~iP~LRR 79 (223)
T COG2884 2 IRFENVSKAYPGG--REALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPTRGKILVNGHDLSRLKGREIPFLRR 79 (223)
T ss_pred eeehhhhhhcCCC--chhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCCCceEEECCeecccccccccchhhh
Confidence 7999999999864 56999999999999999999999999999999999999999999999999998765 456899
Q ss_pred ccEEEccCCCCCcc-cHHHHHhcCCCC------CCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHH
Q 000789 452 KIGLVSQEPILFAT-SLRENIAYGKEN------ATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAI 524 (1283)
Q Consensus 452 ~i~~v~Q~~~l~~~-ti~~ni~~~~~~------~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriai 524 (1283)
+||+|+||.-|... ||+||++|...- .-.+++.++++.+++.+-...+|. +|||||+||+||
T Consensus 80 ~IGvVFQD~rLL~~~tvyeNVA~pL~v~G~~~~~i~~rV~~~L~~VgL~~k~~~lP~-----------~LSGGEQQRvaI 148 (223)
T COG2884 80 QIGVVFQDFRLLPDRTVYENVALPLRVIGKPPREIRRRVSEVLDLVGLKHKARALPS-----------QLSGGEQQRVAI 148 (223)
T ss_pred eeeeEeeeccccccchHhhhhhhhhhccCCCHHHHHHHHHHHHHHhccchhhhcCcc-----------ccCchHHHHHHH
Confidence 99999999988765 999999996431 123567788888888888888874 899999999999
Q ss_pred HHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhc-cCEEEEEeCCEEeEecC
Q 000789 525 ARAILKNPKILLLDEATSALDAESERIVQDALVKIM-TSRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGT 594 (1283)
Q Consensus 525 ARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~ 594 (1283)
|||++.+|++||-||||.+|||++...|++.+.++. .|.||++.||+.+.+.. --|++.+++|+++....
T Consensus 149 ARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~~lv~~~~~rvl~l~~Grl~~d~~ 220 (223)
T COG2884 149 ARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDLELVNRMRHRVLALEDGRLVRDES 220 (223)
T ss_pred HHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccHHHHHhccCcEEEEeCCEEEeccc
Confidence 999999999999999999999999999999999985 47899999999999987 67999999999987543
No 127
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-44 Score=402.18 Aligned_cols=235 Identities=52% Similarity=0.831 Sum_probs=217.5
Q ss_pred EEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHhcceE
Q 000789 1040 IELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMG 1119 (1283)
Q Consensus 1040 I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~ 1119 (1283)
|+++|++++|++. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+...+|+.++
T Consensus 1 l~~~~l~~~~~~~--~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~v~~~g~~~~~~~~~~~~~~i~ 78 (236)
T cd03253 1 IEFENVTFAYDPG--RPVLKDVSFTIPAGKKVAIVGPSGSGKSTILRLLFRFYDVSSGSILIDGQDIREVTLDSLRRAIG 78 (236)
T ss_pred CEEEEEEEEeCCC--CceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEhhhCCHHHHHhhEE
Confidence 5789999999632 35999999999999999999999999999999999999999999999999999888888999999
Q ss_pred EEccCCCCChhhHHHHHhcCCCCCCCHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHHHHHccCCC
Q 000789 1120 LVSQEPVLFNETIRTNIAYGKQGGATEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPK 1199 (1283)
Q Consensus 1120 ~V~Qdp~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiARAll~~p~ 1199 (1283)
|+||++.+|++|++||+.++.. ..+++++.++++.+++.+++..+|.|+++.+.....+||||||||++|||||+++|+
T Consensus 79 ~~~q~~~~~~~tv~~nl~~~~~-~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~LS~G~~~rl~la~aL~~~p~ 157 (236)
T cd03253 79 VVPQDTVLFNDTIGYNIRYGRP-DATDEEVIEAAKAAQIHDKIMRFPDGYDTIVGERGLKLSGGEKQRVAIARAILKNPP 157 (236)
T ss_pred EECCCChhhcchHHHHHhhcCC-CCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999988633 456777888899999999999999999999999999999999999999999999999
Q ss_pred EEEEecccCCCCHHHHHHHHHHHHHHcCCceEEEEecCchHHhhcCEEEEEeCCEEEEecChHHHHhccCchhHHHHHH
Q 000789 1200 ILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALMKITDGAYASLVAL 1278 (1283)
Q Consensus 1200 ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~~D~I~vl~~G~Ive~Gt~~eLl~~~~g~y~~L~~~ 1278 (1283)
+|||||||++||+++...+.+.|.+..++.|+|++||+++.+..||++++|++|++++.|+++++.+. .+.|+.++..
T Consensus 158 llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~d~~~~l~~g~i~~~~~~~~~~~~-~~~~~~~~~~ 235 (236)
T cd03253 158 ILLLDEATSALDTHTEREIQAALRDVSKGRTTIVIAHRLSTIVNADKIIVLKDGRIVERGTHEELLAK-GGLYAEMWKA 235 (236)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHhCCEEEEEECCEEEeeCCHHHHhhc-ccHHHHHHhc
Confidence 99999999999999999999999988668899999999999988999999999999999999999885 7778777754
No 128
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.3e-45 Score=402.49 Aligned_cols=233 Identities=59% Similarity=0.952 Sum_probs=214.3
Q ss_pred EEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHhcceE
Q 000789 1040 IELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMG 1119 (1283)
Q Consensus 1040 I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~ 1119 (1283)
|+++|++++|++. ..++++|+||++++||+++|+|+||||||||+++|.|+++|++|+|.+||.++.+.+...+|+.++
T Consensus 1 i~~~~l~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (234)
T cd03251 1 VEFKNVTFRYPGD-GPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDVDSGRILIDGHDVRDYTLASLRRQIG 79 (234)
T ss_pred CEEEEEEEEeCCC-CccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccCCCCEEEECCEEhhhCCHHHHHhhEE
Confidence 5789999999743 236999999999999999999999999999999999999999999999999998888888899999
Q ss_pred EEccCCCCChhhHHHHHhcCCCCCCCHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHHHHHccCCC
Q 000789 1120 LVSQEPVLFNETIRTNIAYGKQGGATEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPK 1199 (1283)
Q Consensus 1120 ~V~Qdp~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiARAll~~p~ 1199 (1283)
|+||++.+|+.|++||+.++.. ..+.+++.+.++..++.++++.+|.|+++.++.....||||||||++|||||+++|+
T Consensus 80 ~~~q~~~~~~~tv~enl~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~ 158 (234)
T cd03251 80 LVSQDVFLFNDTVAENIAYGRP-GATREEVEEAARAANAHEFIMELPEGYDTVIGERGVKLSGGQRQRIAIARALLKDPP 158 (234)
T ss_pred EeCCCCeeccccHHHHhhccCC-CCCHHHHHHHHHHcCcHHHHHhcccCcceeeccCCCcCCHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999988633 345677778888889999999999999999999999999999999999999999999
Q ss_pred EEEEecccCCCCHHHHHHHHHHHHHHcCCceEEEEecCchHHhhcCEEEEEeCCEEEEecChHHHHhccCchhHHH
Q 000789 1200 ILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALMKITDGAYASL 1275 (1283)
Q Consensus 1200 ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~~D~I~vl~~G~Ive~Gt~~eLl~~~~g~y~~L 1275 (1283)
+|||||||++||+.+...+.+.|++..+++|+|++||+++.+..||++++|++|++++.|+++++... .+.|+.+
T Consensus 159 lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~-~~~~~~~ 233 (234)
T cd03251 159 ILILDEATSALDTESERLVQAALERLMKNRTTFVIAHRLSTIENADRIVVLEDGKIVERGTHEELLAQ-GGVYAKL 233 (234)
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEecCCeEeeeCCHHHHHHc-Ccchhhh
Confidence 99999999999999999999999998788999999999999988999999999999999999999875 6666543
No 129
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=9.6e-46 Score=416.06 Aligned_cols=219 Identities=35% Similarity=0.589 Sum_probs=194.0
Q ss_pred ccEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHHhcc
Q 000789 373 GEIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWIREK 452 (1283)
Q Consensus 373 ~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~ 452 (1283)
..|+++||+++|+ +..+++|+||+|++||+++++|||||||||++++|+||.+|++|+|.+||+++.+++++ ++.
T Consensus 4 ~~l~i~~v~k~yg---~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~~G~I~l~G~~i~~lpp~--kR~ 78 (352)
T COG3842 4 PALEIRNVSKSFG---DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPSSGEILLDGEDITDVPPE--KRP 78 (352)
T ss_pred ceEEEEeeeeecC---CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChh--hcc
Confidence 3599999999997 35799999999999999999999999999999999999999999999999999998876 578
Q ss_pred cEEEccCCCCCcc-cHHHHHhcCCCC---CCH----HHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHH
Q 000789 453 IGLVSQEPILFAT-SLRENIAYGKEN---ATD----QEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAI 524 (1283)
Q Consensus 453 i~~v~Q~~~l~~~-ti~~ni~~~~~~---~~~----~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriai 524 (1283)
||+|||+..||+. ||+|||+||... ..+ +++.++++.+++.++-.+.| .+|||||+|||||
T Consensus 79 ig~VFQ~YALFPHltV~~NVafGLk~~~~~~~~~i~~rv~e~L~lV~L~~~~~R~p-----------~qLSGGQqQRVAL 147 (352)
T COG3842 79 IGMVFQSYALFPHMTVEENVAFGLKVRKKLKKAEIKARVEEALELVGLEGFADRKP-----------HQLSGGQQQRVAL 147 (352)
T ss_pred cceeecCcccCCCCcHHHHhhhhhhhcCCCCHHHHHHHHHHHHHHcCchhhhhhCh-----------hhhChHHHHHHHH
Confidence 9999999999975 999999999751 122 35667777777766655554 6999999999999
Q ss_pred HHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhh-ccCEEEEEeCCEEeEecChhHHhcC
Q 000789 525 ARAILKNPKILLLDEATSALDAESERIVQDALVKIMT--SRTTVVVAHRLTTIR-NADLIAVVHQGKIVEKGTHDELIKD 601 (1283)
Q Consensus 525 ARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~-~~d~i~vl~~G~i~~~g~~~~l~~~ 601 (1283)
||||..+|++||||||.||||.+-+..++..++++.+ +.|.|+|||+-++.- -+|||+||++|+|...|+++|+...
T Consensus 148 ARAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqeEAl~msDrI~Vm~~G~I~Q~gtP~eiY~~ 227 (352)
T COG3842 148 ARALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQEEALAMSDRIAVMNDGRIEQVGTPEEIYER 227 (352)
T ss_pred HHHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhccceEEccCCceeecCCHHHHhhC
Confidence 9999999999999999999999999999999988754 689999999999865 5999999999999999999999988
Q ss_pred CCChhH
Q 000789 602 PEGPYT 607 (1283)
Q Consensus 602 ~~~~~~ 607 (1283)
|...|-
T Consensus 228 P~~~fV 233 (352)
T COG3842 228 PATRFV 233 (352)
T ss_pred cchHHH
Confidence 654443
No 130
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=1.5e-44 Score=405.30 Aligned_cols=240 Identities=35% Similarity=0.604 Sum_probs=218.8
Q ss_pred CccccEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHH
Q 000789 370 KIEGEIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWI 449 (1283)
Q Consensus 370 ~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~ 449 (1283)
...+.|+++|++++|++. +..+|+|+||+|+|||+++|+|+||||||||+++|+|+++|++|+|.++|+++.+.+...+
T Consensus 15 ~~~~~i~~~~l~~~~~~~-~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~ 93 (257)
T cd03288 15 GLGGEIKIHDLCVRYENN-LKPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPLHTL 93 (257)
T ss_pred cCCceEEEEEEEEEeCCC-CCcceeEEEEEEcCCCEEEEECCCCCCHHHHHHHHHcccCCCCCeEEECCEEhhhCCHHHH
Confidence 356789999999999742 2469999999999999999999999999999999999999999999999999988888888
Q ss_pred hcccEEEccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHh
Q 000789 450 REKIGLVSQEPILFATSLRENIAYGKENATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARAIL 529 (1283)
Q Consensus 450 r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARal~ 529 (1283)
++.|+||+|++.+|++|++||+.+... ...+++.++.+..++.++++.+|.|+++.+++.+.+||||||||++|||||+
T Consensus 94 ~~~i~~v~q~~~l~~~tv~~nl~~~~~-~~~~~~~~~l~~~~l~~~~~~~~~~l~~~~~~~~~~LS~G~~qrl~laral~ 172 (257)
T cd03288 94 RSRLSIILQDPILFSGSIRFNLDPECK-CTDDRLWEALEIAQLKNMVKSLPGGLDAVVTEGGENFSVGQRQLFCLARAFV 172 (257)
T ss_pred hhhEEEECCCCcccccHHHHhcCcCCC-CCHHHHHHHHHHhCcHHHHhhcccccCcEeccCCCcCCHHHHHHHHHHHHHh
Confidence 999999999999999999999976432 2455677888888999999999999999999999999999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhccCEEEEEeCCEEeEecChhHHhcCCCChhHHH
Q 000789 530 KNPKILLLDEATSALDAESERIVQDALVKIMTSRTTVVVAHRLTTIRNADLIAVVHQGKIVEKGTHDELIKDPEGPYTQL 609 (1283)
Q Consensus 530 ~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~~~l~~~~~~~~~~~ 609 (1283)
++|++|||||||++||+++++.+.+.++++.+++|+|++||+++.+..||+|++|++|++++.|+++++.+..++.|.++
T Consensus 173 ~~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~~~~~~~~~ 252 (257)
T cd03288 173 RKSSILIMDEATASIDMATENILQKVVMTAFADRTVVTIAHRVSTILDADLVLVLSRGILVECDTPENLLAQEDGVFASL 252 (257)
T ss_pred cCCCEEEEeCCccCCCHHHHHHHHHHHHHhcCCCEEEEEecChHHHHhCCEEEEEECCEEEEeCCHHHHHhccchHHHHH
Confidence 99999999999999999999999999998877899999999999998899999999999999999999987655667766
Q ss_pred HH
Q 000789 610 VR 611 (1283)
Q Consensus 610 ~~ 611 (1283)
+.
T Consensus 253 ~~ 254 (257)
T cd03288 253 VR 254 (257)
T ss_pred Hh
Confidence 54
No 131
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminus, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resistance lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=1.2e-44 Score=397.99 Aligned_cols=220 Identities=37% Similarity=0.618 Sum_probs=206.6
Q ss_pred ccEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHhcc
Q 000789 1038 GAIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQ 1117 (1283)
Q Consensus 1038 g~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~ 1117 (1283)
|.|+++|++++|+.. ..++|+|+||+|++||.+||+|+||||||||+++|+|+++|++|+|.+||.++.+.+...+|+.
T Consensus 1 ~~l~~~~l~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 79 (221)
T cd03244 1 GDIEFKNVSLRYRPN-LPPVLKNISFSIKPGEKVGIVGRTGSGKSSLLLALFRLVELSSGSILIDGVDISKIGLHDLRSR 79 (221)
T ss_pred CcEEEEEEEEecCCC-CcccccceEEEECCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhHhCCHHHHhhh
Confidence 468999999999743 2469999999999999999999999999999999999999999999999999988888889999
Q ss_pred eEEEccCCCCChhhHHHHHhcCCCCCCCHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHHHHHccC
Q 000789 1118 MGLVSQEPVLFNETIRTNIAYGKQGGATEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKN 1197 (1283)
Q Consensus 1118 i~~V~Qdp~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiARAll~~ 1197 (1283)
++|+||+|.+|++|++||+.+.. ..+.+++.++++..++.+++..+|.|+++.+++.+.+||||||||++|||||+++
T Consensus 80 i~~~~q~~~l~~~tv~enl~~~~--~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~~~LS~G~~qr~~laral~~~ 157 (221)
T cd03244 80 ISIIPQDPVLFSGTIRSNLDPFG--EYSDEELWQALERVGLKEFVESLPGGLDTVVEEGGENLSVGQRQLLCLARALLRK 157 (221)
T ss_pred EEEECCCCccccchHHHHhCcCC--CCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCcCCHHHHHHHHHHHHHhcC
Confidence 99999999999999999998642 3567889999999999999999999999999999999999999999999999999
Q ss_pred CCEEEEecccCCCCHHHHHHHHHHHHHHcCCceEEEEecCchHHhhcCEEEEEeCCEEEEecC
Q 000789 1198 PKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGS 1260 (1283)
Q Consensus 1198 p~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~~D~I~vl~~G~Ive~Gt 1260 (1283)
|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+..||++++|++|++++.|+
T Consensus 158 p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~ 220 (221)
T cd03244 158 SKILVLDEATASVDPETDALIQKTIREAFKDCTVLTIAHRLDTIIDSDRILVLDKGRVVEFDS 220 (221)
T ss_pred CCEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCeEEecCC
Confidence 999999999999999999999999999877899999999999999999999999999999886
No 132
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=1.8e-44 Score=401.16 Aligned_cols=236 Identities=66% Similarity=1.048 Sum_probs=214.6
Q ss_pred EEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHhcceE
Q 000789 1040 IELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMG 1119 (1283)
Q Consensus 1040 I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~ 1119 (1283)
|+++|++++|+...+.++|+|+||+|++||.++|+|+||||||||+++|+|+++|++|+|.+||.++.+.+...+|++++
T Consensus 1 l~i~~l~~~~~~~~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 80 (238)
T cd03249 1 IEFKNVSFRYPSRPDVPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDPTSGEILLDGVDIRDLNLRWLRSQIG 80 (238)
T ss_pred CeEEEEEEecCCCCCccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCCCCCEEEECCEehhhcCHHHHHhhEE
Confidence 47899999997532346999999999999999999999999999999999999999999999999998888778888999
Q ss_pred EEccCCCCChhhHHHHHhcCCCCCCCHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHHHHHccCCC
Q 000789 1120 LVSQEPVLFNETIRTNIAYGKQGGATEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPK 1199 (1283)
Q Consensus 1120 ~V~Qdp~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiARAll~~p~ 1199 (1283)
|+||++.+|+.|++||+.++.. ....+++.+.++..++.+++..+|.|+++.+.....+||||||||++||||++.+|+
T Consensus 81 ~~~q~~~~~~~tv~e~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la~al~~~p~ 159 (238)
T cd03249 81 LVSQEPVLFDGTIAENIRYGKP-DATDEEVEEAAKKANIHDFIMSLPDGYDTLVGERGSQLSGGQKQRIAIARALLRNPK 159 (238)
T ss_pred EECCchhhhhhhHHHHhhccCC-CCCHHHHHHHHHHcChHHHHHhhccccceeeccCCccCCHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999987632 345667778888889999999999999999998899999999999999999999999
Q ss_pred EEEEecccCCCCHHHHHHHHHHHHHHcCCceEEEEecCchHHhhcCEEEEEeCCEEEEecChHHHHhccCchhHHHHH
Q 000789 1200 ILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALMKITDGAYASLVA 1277 (1283)
Q Consensus 1200 ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~~D~I~vl~~G~Ive~Gt~~eLl~~~~g~y~~L~~ 1277 (1283)
+|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+..||+|++|++|++++.|+++++.+. .+.++.++.
T Consensus 160 llllDEP~~gLD~~~~~~l~~~l~~~~~g~~vi~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~-~~~~~~~~~ 236 (238)
T cd03249 160 ILLLDEATSALDAESEKLVQEALDRAMKGRTTIVIAHRLSTIRNADLIAVLQNGQVVEQGTHDELMAQ-KGVYAKLVK 236 (238)
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEEeCCHHHHhhc-ChhHHHHhh
Confidence 99999999999999999999999987778999999999999989999999999999999999999875 666666554
No 133
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=7.5e-45 Score=418.39 Aligned_cols=222 Identities=31% Similarity=0.501 Sum_probs=191.9
Q ss_pred EEEEEEEEECCCCC-CcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHH---Hh
Q 000789 1040 IELRCVSFKYPTRP-DVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSW---LR 1115 (1283)
Q Consensus 1040 I~~~nVsf~Y~~~~-~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~---lR 1115 (1283)
|+++||+++|+... ..++|+||||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++.+++..+ +|
T Consensus 2 I~~~~lsk~y~~~~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~~G~I~i~G~~i~~~~~~~l~~~r 81 (343)
T TIGR02314 2 IKLSNITKVFHQGTKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTSGSVIVDGQDLTTLSNSELTKAR 81 (343)
T ss_pred EEEEEEEEEECCCCcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 78999999997421 246999999999999999999999999999999999999999999999999998887544 58
Q ss_pred cceEEEccCCCCCh-hhHHHHHhcCCC-CCCCH----HHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHH
Q 000789 1116 QQMGLVSQEPVLFN-ETIRTNIAYGKQ-GGATE----EEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIA 1189 (1283)
Q Consensus 1116 ~~i~~V~Qdp~Lf~-gTIreNl~~g~~-~~~sd----~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRla 1189 (1283)
++|+||||++.+|. .|++||+.++.. ...+. +++.++++.+++.++....| .+||||||||++
T Consensus 82 ~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~v~e~l~~vgL~~~~~~~~-----------~~LSgGqkQRV~ 150 (343)
T TIGR02314 82 RQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEIKRKVTELLALVGLGDKHDSYP-----------SNLSGGQKQRVA 150 (343)
T ss_pred cCEEEEECCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhhCCh-----------hhCCHHHHHHHH
Confidence 89999999999995 799999986421 12232 34667788887776654443 489999999999
Q ss_pred HHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHHHh
Q 000789 1190 IARAVLKNPKILLLDEATSALDAESERVVQDALERVMV--NRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDALMK 1266 (1283)
Q Consensus 1190 iARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl~ 1266 (1283)
|||||+.+|+|||||||||+||+.+...+.+.|+++.+ +.|+|+|||+++.+.. ||+|++|++|+|+|.|++++++.
T Consensus 151 IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~~v~~~~d~v~vl~~G~iv~~g~~~~v~~ 230 (343)
T TIGR02314 151 IARALASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQGTVSEIFS 230 (343)
T ss_pred HHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHc
Confidence 99999999999999999999999999999999999754 7899999999999976 99999999999999999999987
Q ss_pred ccCchh
Q 000789 1267 ITDGAY 1272 (1283)
Q Consensus 1267 ~~~g~y 1272 (1283)
.+...+
T Consensus 231 ~p~~~~ 236 (343)
T TIGR02314 231 HPKTPL 236 (343)
T ss_pred CCCcHH
Confidence 544433
No 134
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.7e-45 Score=377.71 Aligned_cols=216 Identities=35% Similarity=0.566 Sum_probs=187.7
Q ss_pred cEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCC---HHHHh
Q 000789 374 EIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQ---LKWIR 450 (1283)
Q Consensus 374 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~---~~~~r 450 (1283)
.|+++||+..||+ ++.+|+||||+|++||++||+||||||||||++.|.|+.+|++|+|.++|.++..+. ...+|
T Consensus 3 ~i~~~nl~k~yp~--~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t~G~i~~~g~~i~~~~~k~lr~~r 80 (258)
T COG3638 3 MIEVKNLSKTYPG--GHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPTSGEILFNGVQITKLKGKELRKLR 80 (258)
T ss_pred eEEEeeeeeecCC--CceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCCcceEEecccchhccchHHHHHHH
Confidence 4899999999984 357999999999999999999999999999999999999999999999999998776 45678
Q ss_pred cccEEEccCCCCCcc-cHHHHHhcCCCCC-----------CHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHH
Q 000789 451 EKIGLVSQEPILFAT-SLRENIAYGKENA-----------TDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQ 518 (1283)
Q Consensus 451 ~~i~~v~Q~~~l~~~-ti~~ni~~~~~~~-----------~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGq 518 (1283)
++|||++|++.|.+. ||.+|+..|+-.. +.++-. .+.+-++++ |+....-.+..+|||||
T Consensus 81 ~~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~------~Al~aLerv--gi~~~A~qra~~LSGGQ 152 (258)
T COG3638 81 RDIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKA------QALDALERV--GILDKAYQRASTLSGGQ 152 (258)
T ss_pred HhceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHH------HHHHHHHHc--CcHHHHHHHhccCCcch
Confidence 899999999999876 9999999886432 223222 222334444 55555566778999999
Q ss_pred HHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc--CCCeEEEEecCchhhhc-cCEEEEEeCCEEeEecCh
Q 000789 519 KQRIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIM--TSRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTH 595 (1283)
Q Consensus 519 kqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~ 595 (1283)
+|||+|||||+++|+|+|-|||+|+|||.+.+.+++.|+++. .+.|+|+.-|.++.+++ ||||+-|++|+|+.+|+.
T Consensus 153 QQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdlA~~Y~~Riigl~~G~ivfDg~~ 232 (258)
T COG3638 153 QQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDLAKKYADRIIGLKAGRIVFDGPA 232 (258)
T ss_pred hHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHHhhheEecCCcEEEeCCh
Confidence 999999999999999999999999999999999999999875 46899999999999876 999999999999999999
Q ss_pred hHHh
Q 000789 596 DELI 599 (1283)
Q Consensus 596 ~~l~ 599 (1283)
+|+-
T Consensus 233 ~el~ 236 (258)
T COG3638 233 SELT 236 (258)
T ss_pred hhhh
Confidence 9863
No 135
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.1e-45 Score=384.84 Aligned_cols=198 Identities=35% Similarity=0.558 Sum_probs=170.0
Q ss_pred cEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHHhccc
Q 000789 374 EIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWIREKI 453 (1283)
Q Consensus 374 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 453 (1283)
.+++++|+++|++ ..+|+|+||+|++||+++|+||||||||||+|+|+|+.+|++|+|.++|.++..- ...+
T Consensus 3 ~l~i~~v~~~f~~---~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~~G~V~~~g~~v~~p-----~~~~ 74 (248)
T COG1116 3 LLEIEGVSKSFGG---VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPTSGEVLLDGRPVTGP-----GPDI 74 (248)
T ss_pred eEEEEeeEEEeCc---eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCcccCCC-----CCCE
Confidence 4889999999974 4699999999999999999999999999999999999999999999999988432 3579
Q ss_pred EEEccCCCCCc-ccHHHHHhcCCCCC--CH----HHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHH
Q 000789 454 GLVSQEPILFA-TSLRENIAYGKENA--TD----QEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIAR 526 (1283)
Q Consensus 454 ~~v~Q~~~l~~-~ti~~ni~~~~~~~--~~----~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiAR 526 (1283)
+||+|++.||+ -||+||+.++.+.. +. +.+.+.++.+ |+...-+..+.+||||||||+||||
T Consensus 75 ~~vFQ~~~LlPW~Tv~~NV~l~l~~~~~~~~e~~~~a~~~L~~V-----------gL~~~~~~~P~qLSGGMrQRVaiAR 143 (248)
T COG1116 75 GYVFQEDALLPWLTVLDNVALGLELRGKSKAEARERAKELLELV-----------GLAGFEDKYPHQLSGGMRQRVAIAR 143 (248)
T ss_pred EEEeccCcccchhhHHhhheehhhccccchHhHHHHHHHHHHHc-----------CCcchhhcCccccChHHHHHHHHHH
Confidence 99999999997 69999999986532 11 2344444444 4444445555799999999999999
Q ss_pred HHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhc-cCEEEEEeC--CEEe
Q 000789 527 AILKNPKILLLDEATSALDAESERIVQDALVKIMT--SRTTVVVAHRLTTIRN-ADLIAVVHQ--GKIV 590 (1283)
Q Consensus 527 al~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~--G~i~ 590 (1283)
||+.+|+||+||||++|||+.|+..+++.+.++.+ ++|+++|||++++.-. +|||+||.+ |+|.
T Consensus 144 AL~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~EAv~LsdRivvl~~~P~~i~ 212 (248)
T COG1116 144 ALATRPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVDEAVYLADRVVVLSNRPGRIG 212 (248)
T ss_pred HHhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHhhhCEEEEecCCCccee
Confidence 99999999999999999999999999999998754 5899999999999765 999999999 4553
No 136
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=4.7e-45 Score=393.26 Aligned_cols=215 Identities=32% Similarity=0.493 Sum_probs=193.0
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHhcce
Q 000789 1039 AIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQM 1118 (1283)
Q Consensus 1039 ~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i 1118 (1283)
.++++|++|+|++ .++|+|+||+|++||.++|+||||||||||+++|.|+.+|.+|+|++||.++.+++.+++.+++
T Consensus 2 ~L~~~~ls~~y~~---~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~~G~V~l~g~~i~~~~~kelAk~i 78 (258)
T COG1120 2 MLEVENLSFGYGG---KPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPKSGEVLLDGKDIASLSPKELAKKL 78 (258)
T ss_pred eeEEEEEEEEECC---eeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCCchhhcCHHHHhhhE
Confidence 3789999999974 4699999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEccCC-CCChhhHHHHHhcCCCC------CCC--H-HHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHH
Q 000789 1119 GLVSQEP-VLFNETIRTNIAYGKQG------GAT--E-EEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRI 1188 (1283)
Q Consensus 1119 ~~V~Qdp-~Lf~gTIreNl~~g~~~------~~s--d-~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRl 1188 (1283)
+||||++ .-|.-||+|=+.+|+.+ ..+ | +.+.+|++..++.++..+. + ..||||||||+
T Consensus 79 a~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la~r~-------~----~~LSGGerQrv 147 (258)
T COG1120 79 AYVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLADRP-------V----DELSGGERQRV 147 (258)
T ss_pred EEeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHhcCc-------c----cccChhHHHHH
Confidence 9999996 55678999999988543 112 2 3577889999998886442 2 36999999999
Q ss_pred HHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHc--CCceEEEEecCchHH-hhcCEEEEEeCCEEEEecChHHHH
Q 000789 1189 AIARAVLKNPKILLLDEATSALDAESERVVQDALERVM--VNRTTVVVAHRLTTI-KNADIIAVVKNGVIAEQGSHDALM 1265 (1283)
Q Consensus 1189 aiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~--~~~TvI~IaHrl~ti-~~~D~I~vl~~G~Ive~Gt~~eLl 1265 (1283)
.|||||.++|+||+||||||+||.....+|++.++++. +++|+|+|.|+++.. +.||++++|++|+++.+|+|+|.+
T Consensus 148 ~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~A~ryad~~i~lk~G~i~a~G~p~evl 227 (258)
T COG1120 148 LIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNLAARYADHLILLKDGKIVAQGTPEEVL 227 (258)
T ss_pred HHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEeecCcchhc
Confidence 99999999999999999999999999999999999986 369999999999876 559999999999999999999988
Q ss_pred hc
Q 000789 1266 KI 1267 (1283)
Q Consensus 1266 ~~ 1267 (1283)
..
T Consensus 228 T~ 229 (258)
T COG1120 228 TE 229 (258)
T ss_pred CH
Confidence 63
No 137
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.2e-45 Score=377.90 Aligned_cols=227 Identities=33% Similarity=0.494 Sum_probs=191.2
Q ss_pred cEEEEEEEEECCCCCC-cccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCC-ChHHHhc
Q 000789 1039 AIELRCVSFKYPTRPD-VQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKF-KLSWLRQ 1116 (1283)
Q Consensus 1039 ~I~~~nVsf~Y~~~~~-~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~-~~~~lR~ 1116 (1283)
.++++|+++.|+.+.. .++|+||||+|.+||++||||+||||||||.++|.|+.+|++|+|.+||.++... .....++
T Consensus 3 ~l~v~nl~~~y~~~~~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~~G~I~~~G~~~~~~~~~~~~~~ 82 (252)
T COG1124 3 LLSVRNLSIVYGGGKFAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPSSGSILLDGKPLAPKKRAKAFYR 82 (252)
T ss_pred eEEEeceEEEecCCcchhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCcccCccccchhhcc
Confidence 4899999999985421 1599999999999999999999999999999999999999999999999876543 3446788
Q ss_pred ceEEEccCCCC---ChhhHHHHHhcCC-CC--CCCHHHHHHHHHHhChHH-HHHhCCCCcccccCCCCCCCChhHHHHHH
Q 000789 1117 QMGLVSQEPVL---FNETIRTNIAYGK-QG--GATEEEIIAATEASNAHN-FISALPHGYETNVGERGVQLSGGQKQRIA 1189 (1283)
Q Consensus 1117 ~i~~V~Qdp~L---f~gTIreNl~~g~-~~--~~sd~ei~~al~~a~l~~-~I~~lp~Gldt~vge~G~~LSgGQrQRla 1189 (1283)
.+.+|+|||.- -.-||++-|.=+. .+ +-...+++++++.+++.+ |..+.|. .||||||||+|
T Consensus 83 ~VQmVFQDp~~SLnP~~tv~~~l~Epl~~~~~~~~~~~i~~~L~~VgL~~~~l~R~P~-----------eLSGGQ~QRia 151 (252)
T COG1124 83 PVQMVFQDPYSSLNPRRTVGRILSEPLRPHGLSKSQQRIAELLDQVGLPPSFLDRRPH-----------ELSGGQRQRIA 151 (252)
T ss_pred ceeEEecCCccccCcchhHHHHHhhhhccCCccHHHHHHHHHHHHcCCCHHHHhcCch-----------hcChhHHHHHH
Confidence 99999999952 2346666664111 11 124566999999999864 5555554 79999999999
Q ss_pred HHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcCCc--eEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHHHh
Q 000789 1190 IARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNR--TTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDALMK 1266 (1283)
Q Consensus 1190 iARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~--TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl~ 1266 (1283)
|||||.-+|++||||||||+||.-..+.|++.+.++.+++ |.|+|||+++.+.. ||||+||++|+++|.++.+++..
T Consensus 152 IARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~~v~~~cdRi~Vm~~G~ivE~~~~~~l~~ 231 (252)
T COG1124 152 IARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLALVEHMCDRIAVMDNGQIVEIGPTEELLS 231 (252)
T ss_pred HHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHHHHHHHhhheeeeeCCeEEEeechhhhhc
Confidence 9999999999999999999999999999999999887654 99999999999988 99999999999999999999988
Q ss_pred ccCchhHHHH
Q 000789 1267 ITDGAYASLV 1276 (1283)
Q Consensus 1267 ~~~g~y~~L~ 1276 (1283)
.+...|.+..
T Consensus 232 ~~~h~ytr~L 241 (252)
T COG1124 232 HPSHPYTREL 241 (252)
T ss_pred CCccHHHHHH
Confidence 6556676544
No 138
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.7e-44 Score=397.44 Aligned_cols=227 Identities=48% Similarity=0.827 Sum_probs=210.9
Q ss_pred ccEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHhcc
Q 000789 1038 GAIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQ 1117 (1283)
Q Consensus 1038 g~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~ 1117 (1283)
+.|+++|++++|+.. .++++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||.++.+.+...+|+.
T Consensus 1 ~~l~~~~l~~~~~~~--~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 78 (229)
T cd03254 1 GEIEFENVNFSYDEK--KPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDPQKGQILIDGIDIRDISRKSLRSM 78 (229)
T ss_pred CeEEEEEEEEecCCC--CccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEeHHHcCHHHHhhh
Confidence 358999999999732 359999999999999999999999999999999999999999999999999988888889999
Q ss_pred eEEEccCCCCChhhHHHHHhcCCCCCCCHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHHHHHccC
Q 000789 1118 MGLVSQEPVLFNETIRTNIAYGKQGGATEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKN 1197 (1283)
Q Consensus 1118 i~~V~Qdp~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiARAll~~ 1197 (1283)
++|+||++.+|++|++||+.++.. ...++++.++++..++.++++.+|.|+++.++....+||||||||++|||||+++
T Consensus 79 i~~~~q~~~~~~~tv~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~~rv~la~al~~~ 157 (229)
T cd03254 79 IGVVLQDTFLFSGTIMENIRLGRP-NATDEEVIEAAKEAGAHDFIMKLPNGYDTVLGENGGNLSQGERQLLAIARAMLRD 157 (229)
T ss_pred EEEecCCchhhhhHHHHHHhccCC-CCCHHHHHHHHHHhChHHHHHhCcccccCHhhcCCCcCCHHHHHHHHHHHHHhcC
Confidence 999999999999999999987632 3456778888999999999999999999999998999999999999999999999
Q ss_pred CCEEEEecccCCCCHHHHHHHHHHHHHHcCCceEEEEecCchHHhhcCEEEEEeCCEEEEecChHHHHhc
Q 000789 1198 PKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALMKI 1267 (1283)
Q Consensus 1198 p~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~~D~I~vl~~G~Ive~Gt~~eLl~~ 1267 (1283)
|++|||||||++||+.+.+.+.+.|+++.+++|+|+|||+++.+..||+|++|++|++++.|++++++++
T Consensus 158 p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~~ 227 (229)
T cd03254 158 PKILILDEATSNIDTETEKLIQEALEKLMKGRTSIIIAHRLSTIKNADKILVLDDGKIIEEGTHDELLAK 227 (229)
T ss_pred CCEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEEeCCeEEEeCCHHHHHhh
Confidence 9999999999999999999999999998778999999999999988999999999999999999988764
No 139
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=1.3e-44 Score=382.30 Aligned_cols=210 Identities=36% Similarity=0.543 Sum_probs=173.5
Q ss_pred EEEEEEEEECCCCC-CCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHH---H-
Q 000789 375 IELRDVYFRYPARP-EVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKW---I- 449 (1283)
Q Consensus 375 i~~~~v~f~y~~~~-~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~---~- 449 (1283)
++++||++.|.... ..++|+++||+|++||++||+||||||||||+++|.|+..|++|+|.++|+|+..++.+. +
T Consensus 2 i~~~~v~k~y~~~~~~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt~G~v~i~g~d~~~l~~~~~~~~R 81 (226)
T COG1136 2 IELKNVSKIYGLGGEKVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPTSGEVLINGKDLTKLSEKELAKLR 81 (226)
T ss_pred cEEeeeEEEeccCCcceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEcCcCCHHHHHHHH
Confidence 57899999996432 246999999999999999999999999999999999999999999999999999887533 3
Q ss_pred hcccEEEccCCCCCcc-cHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhCCCCcccccc-CCCCCCChHHHHHHHHH
Q 000789 450 REKIGLVSQEPILFAT-SLRENIAYGKE--NATDQEIRTAIELANAAKFIDKLPKGLDTMAG-EHGTQLSGGQKQRIAIA 525 (1283)
Q Consensus 450 r~~i~~v~Q~~~l~~~-ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~-~~g~~LSgGqkqriaiA 525 (1283)
|++||||+|+..|++. |++|||.++.. .....+..+ .+.+..+.+ |+..... ..+.+||||||||||||
T Consensus 82 ~~~iGfvFQ~~nLl~~ltv~ENv~lpl~~~~~~~~~~~~-----~~~~l~~~l--gl~~~~~~~~p~eLSGGqqQRVAIA 154 (226)
T COG1136 82 RKKIGFVFQNFNLLPDLTVLENVELPLLIAGKSAGRRKR-----AAEELLEVL--GLEDRLLKKKPSELSGGQQQRVAIA 154 (226)
T ss_pred HHhEEEECccCCCCCCCCHHHHHHhHHHHcCCChhHHHH-----HHHHHHHhc--CChhhhccCCchhcCHHHHHHHHHH
Confidence 4679999999999876 99999996321 111111111 112223333 5554333 56789999999999999
Q ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhccCEEEEEeCCEEeE
Q 000789 526 RAILKNPKILLLDEATSALDAESERIVQDALVKIMT--SRTTVVVAHRLTTIRNADLIAVVHQGKIVE 591 (1283)
Q Consensus 526 Ral~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~~d~i~vl~~G~i~~ 591 (1283)
|||+.+|+|++.||||++||.++.+.|.+.+.++.+ ++|+|+|||+......|||++.|.+|++..
T Consensus 155 RAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~~lA~~~dr~i~l~dG~~~~ 222 (226)
T COG1136 155 RALINNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDPELAKYADRVIELKDGKIEE 222 (226)
T ss_pred HHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHhCCEEEEEeCCeeee
Confidence 999999999999999999999999999999999853 689999999999999999999999999543
No 140
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5.8e-45 Score=407.53 Aligned_cols=218 Identities=29% Similarity=0.503 Sum_probs=196.8
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHhcce
Q 000789 1039 AIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQM 1118 (1283)
Q Consensus 1039 ~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i 1118 (1283)
.|+++||+++|++. .+++|+||+|+.||.++|+|||||||||++++|+||.+|++|+|.|||.|+++++++. +.|
T Consensus 3 ~i~l~~v~K~yg~~---~~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~~G~I~i~g~~vt~l~P~~--R~i 77 (338)
T COG3839 3 ELELKNVRKSFGSF---EVLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPTSGEILIDGRDVTDLPPEK--RGI 77 (338)
T ss_pred EEEEeeeEEEcCCc---eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhH--CCE
Confidence 58999999999743 2899999999999999999999999999999999999999999999999999999875 899
Q ss_pred EEEccCCCCCh-hhHHHHHhcCCCC-----CCCHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHHH
Q 000789 1119 GLVSQEPVLFN-ETIRTNIAYGKQG-----GATEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIAR 1192 (1283)
Q Consensus 1119 ~~V~Qdp~Lf~-gTIreNl~~g~~~-----~~sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiAR 1192 (1283)
++|+|++.||. .||+|||+|+... +--++++.++++..++.+.+++.|. +||||||||+||||
T Consensus 78 amVFQ~yALyPhmtV~~Niaf~Lk~~~~~k~ei~~rV~eva~~L~l~~lL~r~P~-----------~LSGGQrQRVAlaR 146 (338)
T COG3839 78 AMVFQNYALYPHMTVYENIAFGLKLRGVPKAEIDKRVKEVAKLLGLEHLLNRKPL-----------QLSGGQRQRVALAR 146 (338)
T ss_pred EEEeCCccccCCCcHHHHhhhhhhhCCCchHHHHHHHHHHHHHcCChhHHhcCcc-----------cCChhhHHHHHHHH
Confidence 99999999995 5999999997431 1235678889999999998888774 89999999999999
Q ss_pred HHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHHHhccC
Q 000789 1193 AVLKNPKILLLDEATSALDAESERVVQDALERVMV--NRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDALMKITD 1269 (1283)
Q Consensus 1193 All~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl~~~~ 1269 (1283)
||+++|++++||||.|+||++....+...|+++.+ +.|+|.|||+...+.. +|||+||.+|+|.+.|+|.|+.+++.
T Consensus 147 AlVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q~g~p~ely~~P~ 226 (338)
T COG3839 147 ALVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQVGTPLELYERPA 226 (338)
T ss_pred HHhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHHHHHhhCCEEEEEeCCeeeecCChHHHhhCcc
Confidence 99999999999999999999999999999988653 5799999999987766 99999999999999999999998877
Q ss_pred chh
Q 000789 1270 GAY 1272 (1283)
Q Consensus 1270 g~y 1272 (1283)
..|
T Consensus 227 n~f 229 (338)
T COG3839 227 NLF 229 (338)
T ss_pred chh
Confidence 665
No 141
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.7e-45 Score=377.69 Aligned_cols=225 Identities=33% Similarity=0.555 Sum_probs=187.3
Q ss_pred cEEEEEEEEECCCCC-CCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCC-CHHHHhc
Q 000789 374 EIELRDVYFRYPARP-EVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKL-QLKWIRE 451 (1283)
Q Consensus 374 ~i~~~~v~f~y~~~~-~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~-~~~~~r~ 451 (1283)
.++++|+++.|+... ..++|+||||+|.+||++||||+||||||||.++|+|+.+|++|+|.++|.++... ..+..++
T Consensus 3 ~l~v~nl~~~y~~~~~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~~G~I~~~G~~~~~~~~~~~~~~ 82 (252)
T COG1124 3 LLSVRNLSIVYGGGKFAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPSSGSILLDGKPLAPKKRAKAFYR 82 (252)
T ss_pred eEEEeceEEEecCCcchhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCcccCccccchhhcc
Confidence 488999999997432 11499999999999999999999999999999999999999999999999877554 3446778
Q ss_pred ccEEEccCCC--CCc-ccHHHHHhcCCC----CCCHHHHHHHHHHhcHH-HHHHhCCCCccccccCCCCCCChHHHHHHH
Q 000789 452 KIGLVSQEPI--LFA-TSLRENIAYGKE----NATDQEIRTAIELANAA-KFIDKLPKGLDTMAGEHGTQLSGGQKQRIA 523 (1283)
Q Consensus 452 ~i~~v~Q~~~--l~~-~ti~~ni~~~~~----~~~~~~~~~~~~~~~~~-~~i~~lp~g~~t~~~~~g~~LSgGqkqria 523 (1283)
.|-+|||||. |-+ -||++-|.-+.. +....++.++++.+++. +|..+ ++.+||||||||||
T Consensus 83 ~VQmVFQDp~~SLnP~~tv~~~l~Epl~~~~~~~~~~~i~~~L~~VgL~~~~l~R-----------~P~eLSGGQ~QRia 151 (252)
T COG1124 83 PVQMVFQDPYSSLNPRRTVGRILSEPLRPHGLSKSQQRIAELLDQVGLPPSFLDR-----------RPHELSGGQRQRIA 151 (252)
T ss_pred ceeEEecCCccccCcchhHHHHHhhhhccCCccHHHHHHHHHHHHcCCCHHHHhc-----------CchhcChhHHHHHH
Confidence 9999999996 333 377776654322 12234466666666553 24444 45689999999999
Q ss_pred HHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCC--eEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHHhc
Q 000789 524 IARAILKNPKILLLDEATSALDAESERIVQDALVKIMTSR--TTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDELIK 600 (1283)
Q Consensus 524 iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~--t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~ 600 (1283)
|||||..+|++||||||||+||+.....|.+.+.++.+++ |.|+|||+++.+.+ ||||+||++|+|+|.++.+++..
T Consensus 152 IARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~~v~~~cdRi~Vm~~G~ivE~~~~~~l~~ 231 (252)
T COG1124 152 IARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLALVEHMCDRIAVMDNGQIVEIGPTEELLS 231 (252)
T ss_pred HHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHHHHHHHhhheeeeeCCeEEEeechhhhhc
Confidence 9999999999999999999999999999999999987754 99999999999988 99999999999999999999988
Q ss_pred CCCChhHHH
Q 000789 601 DPEGPYTQL 609 (1283)
Q Consensus 601 ~~~~~~~~~ 609 (1283)
.+...|.+.
T Consensus 232 ~~~h~ytr~ 240 (252)
T COG1124 232 HPSHPYTRE 240 (252)
T ss_pred CCccHHHHH
Confidence 766666654
No 142
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=1.5e-44 Score=354.85 Aligned_cols=210 Identities=34% Similarity=0.538 Sum_probs=190.3
Q ss_pred EEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHhcceE
Q 000789 1040 IELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMG 1119 (1283)
Q Consensus 1040 I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~ 1119 (1283)
|.+++|.|+|...+ =.++++|++||+|||+||||||||||++++.||..|.+|+|.|||+|....++. ++=++
T Consensus 2 l~L~~V~~~y~~~~-----~~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~~G~i~i~g~d~t~~~P~--~RPVS 74 (231)
T COG3840 2 LALDDVRFSYGHLP-----MRFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPASGEILINGVDHTASPPA--ERPVS 74 (231)
T ss_pred ccccceEEeeCcce-----EEEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCCCceEEEcCeecCcCCcc--cCChh
Confidence 56889999997543 268999999999999999999999999999999999999999999999887764 56799
Q ss_pred EEccCCCCCh-hhHHHHHhcCCCCC-----CCHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHHHH
Q 000789 1120 LVSQEPVLFN-ETIRTNIAYGKQGG-----ATEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARA 1193 (1283)
Q Consensus 1120 ~V~Qdp~Lf~-gTIreNl~~g~~~~-----~sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiARA 1193 (1283)
+++||..||. -||++|+.+|..+. ...+.+..++.++|+.+|..+||. .||||||||+||||+
T Consensus 75 mlFQEnNLFaHLtV~qNigLGl~P~LkL~a~~r~~v~~aa~~vGl~~~~~RLP~-----------~LSGGqRQRvALARc 143 (231)
T COG3840 75 MLFQENNLFAHLTVAQNIGLGLSPGLKLNAEQREKVEAAAAQVGLAGFLKRLPG-----------ELSGGQRQRVALARC 143 (231)
T ss_pred hhhhccccchhhhhhhhhcccCCcccccCHHHHHHHHHHHHHhChhhHhhhCcc-----------ccCchHHHHHHHHHH
Confidence 9999999995 59999999885442 234678899999999999999996 799999999999999
Q ss_pred HccCCCEEEEecccCCCCHHHHHHHHHHHHHHc--CCceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHHHhc
Q 000789 1194 VLKNPKILLLDEATSALDAESERVVQDALERVM--VNRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDALMKI 1267 (1283)
Q Consensus 1194 ll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~--~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl~~ 1267 (1283)
|+|+-+||+||||.|+|||.-..++...+.++. ++.|+++|||.++.++. +|+++++++|||+++|..+++++.
T Consensus 144 lvR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~TllmVTH~~~Da~~ia~~~~fl~~Gri~~~g~~~~~~~~ 220 (231)
T COG3840 144 LVREQPILLLDEPFSALDPALRAEMLALVSQLCDERKMTLLMVTHHPEDAARIADRVVFLDNGRIAAQGSTQELLSG 220 (231)
T ss_pred HhccCCeEEecCchhhcCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHHhhhceEEEeCCEEEeeccHHHHhcc
Confidence 999999999999999999999999999998876 46799999999998876 999999999999999999999986
No 143
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.3e-44 Score=398.10 Aligned_cols=231 Identities=56% Similarity=0.905 Sum_probs=211.3
Q ss_pred EEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHHhcccE
Q 000789 375 IELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWIREKIG 454 (1283)
Q Consensus 375 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 454 (1283)
|+++|++++|++. +.++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.++
T Consensus 1 i~~~~l~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (234)
T cd03251 1 VEFKNVTFRYPGD-GPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDVDSGRILIDGHDVRDYTLASLRRQIG 79 (234)
T ss_pred CEEEEEEEEeCCC-CccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccCCCCEEEECCEEhhhCCHHHHHhhEE
Confidence 4789999999743 236999999999999999999999999999999999999999999999999988777777888999
Q ss_pred EEccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHhcCCCE
Q 000789 455 LVSQEPILFATSLRENIAYGKENATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARAILKNPKI 534 (1283)
Q Consensus 455 ~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARal~~~~~i 534 (1283)
|++|++.+|+.|++||+.++.+....+++.+.++..++.++++.+|.|+++..+..+.+||||||||++|||||+.+|++
T Consensus 80 ~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 159 (234)
T cd03251 80 LVSQDVFLFNDTVAENIAYGRPGATREEVEEAARAANAHEFIMELPEGYDTVIGERGVKLSGGQRQRIAIARALLKDPPI 159 (234)
T ss_pred EeCCCCeeccccHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhcccCcceeeccCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999997665556677777888889999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhccCEEEEEeCCEEeEecChhHHhcCCCChhH
Q 000789 535 LLLDEATSALDAESERIVQDALVKIMTSRTTVVVAHRLTTIRNADLIAVVHQGKIVEKGTHDELIKDPEGPYT 607 (1283)
Q Consensus 535 lllDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~~~l~~~~~~~~~ 607 (1283)
+||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+..||++++|++|++++.|+.+++... .+.|+
T Consensus 160 llLDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~-~~~~~ 231 (234)
T cd03251 160 LILDEATSALDTESERLVQAALERLMKNRTTFVIAHRLSTIENADRIVVLEDGKIVERGTHEELLAQ-GGVYA 231 (234)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEecCCeEeeeCCHHHHHHc-Ccchh
Confidence 9999999999999999999999998778999999999999988999999999999999999998765 44443
No 144
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.9e-44 Score=396.15 Aligned_cols=227 Identities=50% Similarity=0.846 Sum_probs=210.3
Q ss_pred ccEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHHhcc
Q 000789 373 GEIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWIREK 452 (1283)
Q Consensus 373 ~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~ 452 (1283)
+.|+++|++++|++. .++++|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|.++.+.+...+++.
T Consensus 1 ~~l~~~~l~~~~~~~--~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 78 (229)
T cd03254 1 GEIEFENVNFSYDEK--KPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDPQKGQILIDGIDIRDISRKSLRSM 78 (229)
T ss_pred CeEEEEEEEEecCCC--CccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEeHHHcCHHHHhhh
Confidence 358999999999632 359999999999999999999999999999999999999999999999999988787788889
Q ss_pred cEEEccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHhcCC
Q 000789 453 IGLVSQEPILFATSLRENIAYGKENATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARAILKNP 532 (1283)
Q Consensus 453 i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARal~~~~ 532 (1283)
++|++|++.+|++|++||+.++.+....+++.++++..++.++++.+|.|+++.++....+||||||||++|||||+.+|
T Consensus 79 i~~~~q~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~~rv~la~al~~~p 158 (229)
T cd03254 79 IGVVLQDTFLFSGTIMENIRLGRPNATDEEVIEAAKEAGAHDFIMKLPNGYDTVLGENGGNLSQGERQLLAIARAMLRDP 158 (229)
T ss_pred EEEecCCchhhhhHHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCcccccCHhhcCCCcCCHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999886655567778888888999999999999999999999999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhccCEEEEEeCCEEeEecChhHHhcC
Q 000789 533 KILLLDEATSALDAESERIVQDALVKIMTSRTTVVVAHRLTTIRNADLIAVVHQGKIVEKGTHDELIKD 601 (1283)
Q Consensus 533 ~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~~~l~~~ 601 (1283)
++|||||||++||+.+.+.+.+.|.++.+++|+|++||+++.+..||+|++|++|++++.|+.+++..+
T Consensus 159 ~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~~ 227 (229)
T cd03254 159 KILILDEATSNIDTETEKLIQEALEKLMKGRTSIIIAHRLSTIKNADKILVLDDGKIIEEGTHDELLAK 227 (229)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEEeCCeEEEeCCHHHHHhh
Confidence 999999999999999999999999998778999999999999988999999999999999998887654
No 145
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.3e-44 Score=397.68 Aligned_cols=233 Identities=50% Similarity=0.804 Sum_probs=213.0
Q ss_pred EEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHHhcccE
Q 000789 375 IELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWIREKIG 454 (1283)
Q Consensus 375 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 454 (1283)
|+++|++++|++. .++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|+++.+.+...+++.++
T Consensus 1 l~~~~l~~~~~~~--~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~v~~~g~~~~~~~~~~~~~~i~ 78 (236)
T cd03253 1 IEFENVTFAYDPG--RPVLKDVSFTIPAGKKVAIVGPSGSGKSTILRLLFRFYDVSSGSILIDGQDIREVTLDSLRRAIG 78 (236)
T ss_pred CEEEEEEEEeCCC--CceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEhhhCCHHHHHhhEE
Confidence 4789999999632 35999999999999999999999999999999999999999999999999998888888888999
Q ss_pred EEccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHhcCCCE
Q 000789 455 LVSQEPILFATSLRENIAYGKENATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARAILKNPKI 534 (1283)
Q Consensus 455 ~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARal~~~~~i 534 (1283)
|++|++.+|+.|++||+.++.+..+.+++.++++..++.+++..+|.|+++.+..++.+||||||||++|||||+++|++
T Consensus 79 ~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~LS~G~~~rl~la~aL~~~p~l 158 (236)
T cd03253 79 VVPQDTVLFNDTIGYNIRYGRPDATDEEVIEAAKAAQIHDKIMRFPDGYDTIVGERGLKLSGGEKQRVAIARAILKNPPI 158 (236)
T ss_pred EECCCChhhcchHHHHHhhcCCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999998665566677778888899999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhccCEEEEEeCCEEeEecChhHHhcCCCChhHHHH
Q 000789 535 LLLDEATSALDAESERIVQDALVKIMTSRTTVVVAHRLTTIRNADLIAVVHQGKIVEKGTHDELIKDPEGPYTQLV 610 (1283)
Q Consensus 535 lllDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~~~l~~~~~~~~~~~~ 610 (1283)
|||||||++||+++...+.+.|.++.+++|+|++||+++.+..||++++|++|++++.|+.+++... ...|..++
T Consensus 159 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~d~~~~l~~g~i~~~~~~~~~~~~-~~~~~~~~ 233 (236)
T cd03253 159 LLLDEATSALDTHTEREIQAALRDVSKGRTTIVIAHRLSTIVNADKIIVLKDGRIVERGTHEELLAK-GGLYAEMW 233 (236)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHhCCEEEEEECCEEEeeCCHHHHhhc-ccHHHHHH
Confidence 9999999999999999999999988768899999999999988999999999999999999998765 44554443
No 146
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=4.7e-44 Score=397.76 Aligned_cols=227 Identities=65% Similarity=1.058 Sum_probs=208.1
Q ss_pred EEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHHhcccE
Q 000789 375 IELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWIREKIG 454 (1283)
Q Consensus 375 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 454 (1283)
|+++|+++.|++..+.++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+....+++++
T Consensus 1 l~i~~l~~~~~~~~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 80 (238)
T cd03249 1 IEFKNVSFRYPSRPDVPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDPTSGEILLDGVDIRDLNLRWLRSQIG 80 (238)
T ss_pred CeEEEEEEecCCCCCccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCCCCCEEEECCEehhhcCHHHHHhhEE
Confidence 47899999997533346999999999999999999999999999999999999999999999999988777777778899
Q ss_pred EEccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHhcCCCE
Q 000789 455 LVSQEPILFATSLRENIAYGKENATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARAILKNPKI 534 (1283)
Q Consensus 455 ~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARal~~~~~i 534 (1283)
|++|++.+|+.|++||+.++.+....+++.+.++..++.+++..+|.|+++..+....+||||||||++|||||+.+|++
T Consensus 81 ~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 160 (238)
T cd03249 81 LVSQEPVLFDGTIAENIRYGKPDATDEEVEEAAKKANIHDFIMSLPDGYDTLVGERGSQLSGGQKQRIAIARALLRNPKI 160 (238)
T ss_pred EECCchhhhhhhHHHHhhccCCCCCHHHHHHHHHHcChHHHHHhhccccceeeccCCccCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999987655555666777777888899999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhccCEEEEEeCCEEeEecChhHHhcC
Q 000789 535 LLLDEATSALDAESERIVQDALVKIMTSRTTVVVAHRLTTIRNADLIAVVHQGKIVEKGTHDELIKD 601 (1283)
Q Consensus 535 lllDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~~~l~~~ 601 (1283)
|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+..||+|++|++|++++.|+.+++...
T Consensus 161 lllDEP~~gLD~~~~~~l~~~l~~~~~g~~vi~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~ 227 (238)
T cd03249 161 LLLDEATSALDAESEKLVQEALDRAMKGRTTIVIAHRLSTIRNADLIAVLQNGQVVEQGTHDELMAQ 227 (238)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEEeCCHHHHhhc
Confidence 9999999999999999999999988777899999999999988999999999999999999888765
No 147
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=2.1e-44 Score=414.75 Aligned_cols=226 Identities=35% Similarity=0.575 Sum_probs=190.2
Q ss_pred EEEEEEEEECCCCC-CCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHH---Hh
Q 000789 375 IELRDVYFRYPARP-EVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKW---IR 450 (1283)
Q Consensus 375 i~~~~v~f~y~~~~-~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~---~r 450 (1283)
|+++||+++|++.. ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||+++..++... +|
T Consensus 2 I~~~~lsk~y~~~~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~~G~I~i~G~~i~~~~~~~l~~~r 81 (343)
T TIGR02314 2 IKLSNITKVFHQGTKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTSGSVIVDGQDLTTLSNSELTKAR 81 (343)
T ss_pred EEEEEEEEEECCCCcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 78999999996322 246999999999999999999999999999999999999999999999999998877544 57
Q ss_pred cccEEEccCCCCCc-ccHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHH
Q 000789 451 EKIGLVSQEPILFA-TSLRENIAYGKE--NATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARA 527 (1283)
Q Consensus 451 ~~i~~v~Q~~~l~~-~ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARa 527 (1283)
++||||||++.+|+ .|++||+.++.. ..+.++..+ .+.+.++.+ |+.......+.+||||||||++||||
T Consensus 82 ~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~-----~v~e~l~~v--gL~~~~~~~~~~LSgGqkQRV~IARA 154 (343)
T TIGR02314 82 RQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEIKR-----KVTELLALV--GLGDKHDSYPSNLSGGQKQRVAIARA 154 (343)
T ss_pred cCEEEEECCccccccCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CCchhhhCChhhCCHHHHHHHHHHHH
Confidence 89999999999996 699999998642 122222211 112333333 55555556678999999999999999
Q ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHHhcCCCC
Q 000789 528 ILKNPKILLLDEATSALDAESERIVQDALVKIMT--SRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDELIKDPEG 604 (1283)
Q Consensus 528 l~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~~~~ 604 (1283)
|+.+|++||||||||+||+.+...+.+.|+++.+ +.|+|+|||+++.+.. ||+|++|++|+|++.|++++++.++..
T Consensus 155 L~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~~v~~~~d~v~vl~~G~iv~~g~~~~v~~~p~~ 234 (343)
T TIGR02314 155 LASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQGTVSEIFSHPKT 234 (343)
T ss_pred HHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHcCCCc
Confidence 9999999999999999999999999999999864 6899999999999976 999999999999999999999876544
Q ss_pred hhH
Q 000789 605 PYT 607 (1283)
Q Consensus 605 ~~~ 607 (1283)
.+.
T Consensus 235 ~~~ 237 (343)
T TIGR02314 235 PLA 237 (343)
T ss_pred HHH
Confidence 443
No 148
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-44 Score=391.06 Aligned_cols=215 Identities=38% Similarity=0.650 Sum_probs=192.2
Q ss_pred cEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccC-CCCHHHHhcc
Q 000789 374 EIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIK-KLQLKWIREK 452 (1283)
Q Consensus 374 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~-~~~~~~~r~~ 452 (1283)
.++++|++|+|+++ .++|+|+||+|++|+.++|+||||||||||+++|.|+++|++|+|.++|.++. +.+...+|++
T Consensus 3 ~i~~~~l~~~y~~~--~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~~G~v~~~g~~~~~~~~~~~~~~~ 80 (235)
T COG1122 3 MIEAENLSFRYPGR--KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPTSGEVLVDGLDTSSEKSLLELRQK 80 (235)
T ss_pred eEEEEEEEEEcCCC--ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCCCCEEEECCeeccchhhHHHhhcc
Confidence 48899999999865 57999999999999999999999999999999999999999999999999998 4788899999
Q ss_pred cEEEccCC--CCCcccHHHHHhcCCCCC--CHHH----HHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHH
Q 000789 453 IGLVSQEP--ILFATSLRENIAYGKENA--TDQE----IRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAI 524 (1283)
Q Consensus 453 i~~v~Q~~--~l~~~ti~~ni~~~~~~~--~~~~----~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriai 524 (1283)
+|||+|+| .+|..||.|.++||.++. +.++ +.++++.+++.++ ..+...+||||||||+||
T Consensus 81 vG~VfQnpd~q~~~~tV~~evafg~~n~g~~~~e~~~rv~~~l~~vgl~~~-----------~~r~p~~LSGGqkqRvaI 149 (235)
T COG1122 81 VGLVFQNPDDQLFGPTVEDEVAFGLENLGLPREEIEERVAEALELVGLEEL-----------LDRPPFNLSGGQKQRVAI 149 (235)
T ss_pred eEEEEECcccccccCcHHHHHhhchhhcCCCHHHHHHHHHHHHHHcCchhh-----------ccCCccccCCcceeeHHh
Confidence 99999999 799999999999997642 3333 4455555555544 444557999999999999
Q ss_pred HHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCC--CeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHHhcC
Q 000789 525 ARAILKNPKILLLDEATSALDAESERIVQDALVKIMTS--RTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDELIKD 601 (1283)
Q Consensus 525 ARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~--~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~ 601 (1283)
|.+|+.+|++||||||||+||+...+.+.+.++++.+. +|+|++||+++.+.. ||++++|++|+++.+|++.+++++
T Consensus 150 A~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~~~~~~ad~v~vl~~G~i~~~g~p~~i~~~ 229 (235)
T COG1122 150 AGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLELVLEYADRVVVLDDGKILADGDPAEIFND 229 (235)
T ss_pred hHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHHHHHhhCCEEEEEECCEEeecCCHHHHhhh
Confidence 99999999999999999999999999999999998754 799999999999987 999999999999999999998865
No 149
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.8e-44 Score=390.22 Aligned_cols=216 Identities=37% Similarity=0.622 Sum_probs=196.3
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCC-CCChHHHhcc
Q 000789 1039 AIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELP-KFKLSWLRQQ 1117 (1283)
Q Consensus 1039 ~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~-~~~~~~lR~~ 1117 (1283)
.|+++|++|+|+++ .++|+|+||+|++||.++|+|+||||||||+++|.|++.|++|.|.+||.+++ +.+...+|++
T Consensus 3 ~i~~~~l~~~y~~~--~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~~G~v~~~g~~~~~~~~~~~~~~~ 80 (235)
T COG1122 3 MIEAENLSFRYPGR--KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPTSGEVLVDGLDTSSEKSLLELRQK 80 (235)
T ss_pred eEEEEEEEEEcCCC--ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCCCCEEEECCeeccchhhHHHhhcc
Confidence 48999999999865 57999999999999999999999999999999999999999999999999998 4788999999
Q ss_pred eEEEccCC--CCChhhHHHHHhcCCCC-CCCHHH----HHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHH
Q 000789 1118 MGLVSQEP--VLFNETIRTNIAYGKQG-GATEEE----IIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAI 1190 (1283)
Q Consensus 1118 i~~V~Qdp--~Lf~gTIreNl~~g~~~-~~sd~e----i~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlai 1190 (1283)
+|+|+|+| .+|..||.|.++||... ..+.+| +.++++.+++.++....| .+||||||||+||
T Consensus 81 vG~VfQnpd~q~~~~tV~~evafg~~n~g~~~~e~~~rv~~~l~~vgl~~~~~r~p-----------~~LSGGqkqRvaI 149 (235)
T COG1122 81 VGLVFQNPDDQLFGPTVEDEVAFGLENLGLPREEIEERVAEALELVGLEELLDRPP-----------FNLSGGQKQRVAI 149 (235)
T ss_pred eEEEEECcccccccCcHHHHHhhchhhcCCCHHHHHHHHHHHHHHcCchhhccCCc-----------cccCCcceeeHHh
Confidence 99999999 89999999999998532 345444 667888888887754444 4899999999999
Q ss_pred HHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcCC--ceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHHHhc
Q 000789 1191 ARAVLKNPKILLLDEATSALDAESERVVQDALERVMVN--RTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDALMKI 1267 (1283)
Q Consensus 1191 ARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~~--~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl~~ 1267 (1283)
|.+|..+|++||||||||+||+...+.+.+.++++.+. +|+|+|||+++.+.. |||++||++|+++.+|+|+|+.++
T Consensus 150 A~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~~~~~~ad~v~vl~~G~i~~~g~p~~i~~~ 229 (235)
T COG1122 150 AGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLELVLEYADRVVVLDDGKILADGDPAEIFND 229 (235)
T ss_pred hHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHHHHHhhCCEEEEEECCEEeecCCHHHHhhh
Confidence 99999999999999999999999999999999998644 799999999999988 999999999999999999999875
No 150
>COG4178 ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only]
Probab=100.00 E-value=8.2e-41 Score=395.19 Aligned_cols=473 Identities=15% Similarity=0.172 Sum_probs=368.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCC---CChhHHHHHHhhhHHHHHHHHHHH
Q 000789 761 ALIYLVLGIINLIAVPFQNYFFGVAGGKLIRRIRSLTFEKVVHQEISWFDDPA---NSSGSVGARLSTDASTIRSLVGDS 837 (1283)
Q Consensus 761 ~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~ff~~~~---~~~G~l~~rl~~D~~~i~~~~~~~ 837 (1283)
+.+|..++.+..+....+.|+......++-..|-+.+.++.+...-.|+.... +.+-..=.|+..|+...-+.....
T Consensus 89 l~~f~~ia~~~v~~~v~~~~L~~~l~~~wR~wLt~~l~~~wl~~~~~y~l~~~~~~~~~dNpDQRi~eDi~~~t~~t~~l 168 (604)
T COG4178 89 LQVFAIIAGLLVLLNVAQTWLNQMLRLRWREWLTKDLLDRWLDPRRYYRLAQAGGIGLIDNPDQRIQEDIRNFTETTLDL 168 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhcccccCCCChHHhHHHHHHHHHhhHHHH
Confidence 55666777777777778889988899999999999999999888755544211 111223468999999888877777
Q ss_pred HHHHHHHHHHHHHHHHHHHH---------------HhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Q 000789 838 LALVVQNIATIAAGLIIAFT---------------ANWILAFVILAVSPLMLVQGYTQTKFMKGFSADAKLMYEEASQVA 902 (1283)
Q Consensus 838 l~~~~~~~~~~~~~~~~~~~---------------~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 902 (1283)
...++.+++.++...++++. +.-.+.++++..+++-.+..+...+.+.+..-+..+.++.....+
T Consensus 169 ~~g~l~s~islisF~~iLw~lsg~~~~~~~g~~~~I~g~mv~~~i~Ya~~~s~~~~~iGr~Li~LN~~~~~~EA~fR~~L 248 (604)
T COG4178 169 SFGLLQSVISLISFTGILWSLSGGLAFTIGGFSFGIPGYMVWAVIIYAISASLLTHLIGRPLIRLNFERQKLEADFRYSL 248 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCcceEeecccccccchHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHH
Confidence 77788888777777766652 223334444445555555555666666666667777777888888
Q ss_pred HHHHhhhHHHHHhccHHHHHHHHHHHHhcHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHH
Q 000789 903 NDAVGSIRTVASFCSEEKVMDLYEKKCEGPLKNGVRRGILSGAGFGFSFLVLYCTNAFCFYIGSVLVEHGKATFGQVFKV 982 (1283)
Q Consensus 903 ~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~g~~~~~~~~~~ 982 (1283)
...-++.+.|..|+.|+...++.++.+........+..........+......+..++-+..+.-....|.+++|.++.+
T Consensus 249 vrv~enaE~IAly~GE~~Er~~l~~~f~~v~~n~~~l~~~~~~l~~~~~gy~~~s~v~P~li~ap~~f~g~i~~G~lmqa 328 (604)
T COG4178 249 VRVRENAEAIALYRGEKVERRRLDDRFDAVLGNWRRLVRAQIRLTWFQLGYGWLSVVLPILIAAPRYFSGQITFGGLMQA 328 (604)
T ss_pred HHHHhhHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhHHHHHHHHHhccHhhhcCcChHHHHHHH
Confidence 88889999999999999988888887777776655554444444444444445555555666777788999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc------CCCCCCCCCcCCc-cCCCcccEEEEEEEEECCCCCCc
Q 000789 983 FFALTISALGVSQTSAMAPDTTKAKDSAASIFEILDS------KPKIDSSKDEGMT-LSSVGGAIELRCVSFKYPTRPDV 1055 (1283)
Q Consensus 983 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~------~~~~~~~~~~~~~-~~~~~g~I~~~nVsf~Y~~~~~~ 1055 (1283)
..++..+...++.+...++.+..-.+...|+.++.+. +++.......... ....+..|+|+|++..-|+. .
T Consensus 329 ~~aF~~v~sslswfi~~~~~ia~~rA~~~Rl~~f~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nl~l~~p~~--~ 406 (604)
T COG4178 329 VGAFGQVHSSLSWFIDNYDAIADWRATLLRLAEFRQALEAAQMDTEKPARTGRRIDFDDNADHGITLENLSLRTPDG--Q 406 (604)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhccCcccccCcccccccccccccceeEEeeeeEECCCC--C
Confidence 9999999999999999999999999999999887642 1111111000000 00014679999999999864 3
Q ss_pred ccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHhcceEEEccCCCCChhhHHHH
Q 000789 1056 QIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMGLVSQEPVLFNETIRTN 1135 (1283)
Q Consensus 1056 ~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qdp~Lf~gTIreN 1135 (1283)
..++++||+|+|||.+-|.|+||||||||+++|.|+++.-+|+|.+=. -+.+-|+||.|++-.||+||=
T Consensus 407 ~ll~~l~~~v~~G~~llI~G~SG~GKTsLlRaiaGLWP~g~G~I~~P~-----------~~~~lflpQ~PY~p~GtLre~ 475 (604)
T COG4178 407 TLLSELNFEVRPGERLLITGESGAGKTSLLRALAGLWPWGSGRISMPA-----------DSALLFLPQRPYLPQGTLREA 475 (604)
T ss_pred eeeccceeeeCCCCEEEEECCCCCCHHHHHHHHhccCccCCCceecCC-----------CCceEEecCCCCCCCccHHHH
Confidence 789999999999999999999999999999999999999999986531 134789999999999999999
Q ss_pred HhcCCCC-CCCHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHHHHHccCCCEEEEecccCCCCHHH
Q 000789 1136 IAYGKQG-GATEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAES 1214 (1283)
Q Consensus 1136 l~~g~~~-~~sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiARAll~~p~ILiLDEaTSaLD~~t 1214 (1283)
|+|.... +.+|+|+.++|.+|++.++++++.+ .+ .-..-||+|||||||+||.+|++|++++|||||||||+++
T Consensus 476 l~YP~~~~~~~d~~l~~vL~~vgL~~L~~rl~~-~~----~W~~vLS~GEqQRlafARilL~kP~~v~LDEATsALDe~~ 550 (604)
T COG4178 476 LCYPNAAPDFSDAELVAVLHKVGLGDLAERLDE-ED----RWDRVLSGGEQQRLAFARLLLHKPKWVFLDEATSALDEET 550 (604)
T ss_pred HhCCCCCCCCChHHHHHHHHHcCcHHHHHHHhc-cC----cHhhhcChhHHHHHHHHHHHHcCCCEEEEecchhccChHH
Confidence 9986543 3899999999999999999999743 22 2445799999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCceEEEEecCchHHhhcCEEEEEe
Q 000789 1215 ERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVK 1251 (1283)
Q Consensus 1215 e~~I~~~L~~~~~~~TvI~IaHrl~ti~~~D~I~vl~ 1251 (1283)
|..+.+.+++...++|+|-|+||.......++.+-++
T Consensus 551 e~~l~q~l~~~lp~~tvISV~Hr~tl~~~h~~~l~l~ 587 (604)
T COG4178 551 EDRLYQLLKEELPDATVISVGHRPTLWNFHSRQLELL 587 (604)
T ss_pred HHHHHHHHHhhCCCCEEEEeccchhhHHHHhhheeec
Confidence 9999999999999999999999988877777766654
No 151
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=1.9e-44 Score=357.68 Aligned_cols=209 Identities=31% Similarity=0.521 Sum_probs=187.4
Q ss_pred EEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCC---hHHHhc
Q 000789 1040 IELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFK---LSWLRQ 1116 (1283)
Q Consensus 1040 I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~---~~~lR~ 1116 (1283)
|+|+||+.+|+.. +++|+||||+|++||.+-++|||||||||++|+|++...|++|+|.++|.|++.++ ...||+
T Consensus 2 I~f~~V~k~Y~~g--~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt~G~i~~~~~dl~~l~~~~iP~LRR 79 (223)
T COG2884 2 IRFENVSKAYPGG--REALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPTRGKILVNGHDLSRLKGREIPFLRR 79 (223)
T ss_pred eeehhhhhhcCCC--chhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCCCceEEECCeecccccccccchhhh
Confidence 8999999999965 57999999999999999999999999999999999999999999999999998776 456899
Q ss_pred ceEEEccCCCCC-hhhHHHHHhcCCC-CCCC----HHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHH
Q 000789 1117 QMGLVSQEPVLF-NETIRTNIAYGKQ-GGAT----EEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAI 1190 (1283)
Q Consensus 1117 ~i~~V~Qdp~Lf-~gTIreNl~~g~~-~~~s----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlai 1190 (1283)
+||+|+||..|. +-|+.||++|... ...+ .+++.++++.+|+.+-...+|. .|||||+||+||
T Consensus 80 ~IGvVFQD~rLL~~~tvyeNVA~pL~v~G~~~~~i~~rV~~~L~~VgL~~k~~~lP~-----------~LSGGEQQRvaI 148 (223)
T COG2884 80 QIGVVFQDFRLLPDRTVYENVALPLRVIGKPPREIRRRVSEVLDLVGLKHKARALPS-----------QLSGGEQQRVAI 148 (223)
T ss_pred eeeeEeeeccccccchHhhhhhhhhhccCCCHHHHHHHHHHHHHHhccchhhhcCcc-----------ccCchHHHHHHH
Confidence 999999999766 6799999987521 1223 3567789999999999999985 899999999999
Q ss_pred HHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchHHhhc-CEEEEEeCCEEEEecCh
Q 000789 1191 ARAVLKNPKILLLDEATSALDAESERVVQDALERVM-VNRTTVVVAHRLTTIKNA-DIIAVVKNGVIAEQGSH 1261 (1283)
Q Consensus 1191 ARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHrl~ti~~~-D~I~vl~~G~Ive~Gt~ 1261 (1283)
|||++.+|++||-||||-+|||++...|++.+.+.- .|.||++.||+.+.+..+ .|++.+++|+++....+
T Consensus 149 ARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~~lv~~~~~rvl~l~~Grl~~d~~~ 221 (223)
T COG2884 149 ARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDLELVNRMRHRVLALEDGRLVRDESR 221 (223)
T ss_pred HHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccHHHHHhccCcEEEEeCCEEEecccc
Confidence 999999999999999999999999999999998863 578999999999999884 68999999999976544
No 152
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=5.3e-44 Score=369.17 Aligned_cols=224 Identities=32% Similarity=0.520 Sum_probs=193.1
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCCh---HHHh
Q 000789 1039 AIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKL---SWLR 1115 (1283)
Q Consensus 1039 ~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~---~~lR 1115 (1283)
.|++++|+++|+++ .|++||||+|++||.++|+|+||||||||++++.|+..|++|+|.++|.|+.+++- ..+|
T Consensus 8 ~I~vr~v~~~fG~~---~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~~GeI~i~G~~i~~ls~~~~~~ir 84 (263)
T COG1127 8 LIEVRGVTKSFGDR---VILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPDKGEILIDGEDIPQLSEEELYEIR 84 (263)
T ss_pred eEEEeeeeeecCCE---EEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCCCCeEEEcCcchhccCHHHHHHHH
Confidence 59999999999754 69999999999999999999999999999999999999999999999999998875 4568
Q ss_pred cceEEEccCCCCCh-hhHHHHHhcCCC--CCCCHHHHH----HHHHHhChHHH-HHhCCCCcccccCCCCCCCChhHHHH
Q 000789 1116 QQMGLVSQEPVLFN-ETIRTNIAYGKQ--GGATEEEII----AATEASNAHNF-ISALPHGYETNVGERGVQLSGGQKQR 1187 (1283)
Q Consensus 1116 ~~i~~V~Qdp~Lf~-gTIreNl~~g~~--~~~sd~ei~----~al~~a~l~~~-I~~lp~Gldt~vge~G~~LSgGQrQR 1187 (1283)
+++|+++|...||+ -||+||+.|-.. .+.+++++. ..++.+|+..- .+.+| +.||||.+.|
T Consensus 85 ~r~GvlFQ~gALFssltV~eNVafplre~~~lp~~~i~~lv~~KL~~VGL~~~~~~~~P-----------sELSGGM~KR 153 (263)
T COG1127 85 KRMGVLFQQGALFSSLTVFENVAFPLREHTKLPESLIRELVLMKLELVGLRGAAADLYP-----------SELSGGMRKR 153 (263)
T ss_pred hheeEEeeccccccccchhHhhheehHhhccCCHHHHHHHHHHHHHhcCCChhhhhhCc-----------hhhcchHHHH
Confidence 99999999999995 499999987421 134555444 35666776655 34444 4799999999
Q ss_pred HHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHH
Q 000789 1188 IAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMV--NRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDAL 1264 (1283)
Q Consensus 1188 laiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eL 1264 (1283)
+|||||+.-+|+||++|||||+|||.+...+-+.|+++.+ +.|+++|||+++++.. ||||+++.+|+|+.+|+++||
T Consensus 154 vaLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~s~~~i~Drv~~L~~gkv~~~Gt~~el 233 (263)
T COG1127 154 VALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLDSLLTIADRVAVLADGKVIAEGTPEEL 233 (263)
T ss_pred HHHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChHHHHhhhceEEEEeCCEEEEeCCHHHH
Confidence 9999999999999999999999999999999998887653 7899999999999987 899999999999999999999
Q ss_pred HhccCchhHHHH
Q 000789 1265 MKITDGAYASLV 1276 (1283)
Q Consensus 1265 l~~~~g~y~~L~ 1276 (1283)
.+..+-..++.+
T Consensus 234 ~~sd~P~v~qf~ 245 (263)
T COG1127 234 LASDDPWVRQFF 245 (263)
T ss_pred HhCCCHHHHHHh
Confidence 986444444443
No 153
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=1.4e-43 Score=389.19 Aligned_cols=220 Identities=40% Similarity=0.715 Sum_probs=202.1
Q ss_pred ccEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHhcc
Q 000789 1038 GAIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQ 1117 (1283)
Q Consensus 1038 g~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~ 1117 (1283)
+.|+++|++++|+.. ..++++|+||+|++||+++|+||||||||||+++|.|+++|++|+|.++|.++...+...+|+.
T Consensus 1 ~~l~~~~l~~~~~~~-~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 79 (220)
T cd03245 1 GRIEFRNVSFSYPNQ-EIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSVLLDGTDIRQLDPADLRRN 79 (220)
T ss_pred CeEEEEEEEEEcCCC-CcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCeEEECCEEhHHCCHHHHHhh
Confidence 358999999999742 2469999999999999999999999999999999999999999999999999988777778899
Q ss_pred eEEEccCCCCChhhHHHHHhcCCCCCCCHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHHHHHccC
Q 000789 1118 MGLVSQEPVLFNETIRTNIAYGKQGGATEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKN 1197 (1283)
Q Consensus 1118 i~~V~Qdp~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiARAll~~ 1197 (1283)
++|+||++.+|..|++||+.++.. ..+++++.++++..++.+.+..+|.|++|.+.+...+||||||||++||||++.+
T Consensus 80 i~~~~q~~~~~~~tv~e~l~~~~~-~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~la~al~~~ 158 (220)
T cd03245 80 IGYVPQDVTLFYGTLRDNITLGAP-LADDERILRAAELAGVTDFVNKHPNGLDLQIGERGRGLSGGQRQAVALARALLND 158 (220)
T ss_pred EEEeCCCCccccchHHHHhhcCCC-CCCHHHHHHHHHHcCcHHHHHhccccccceecCCCccCCHHHHHHHHHHHHHhcC
Confidence 999999999999999999987532 3456678888999999999999999999999988899999999999999999999
Q ss_pred CCEEEEecccCCCCHHHHHHHHHHHHHHcCCceEEEEecCchHHhhcCEEEEEeCCEEEEec
Q 000789 1198 PKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQG 1259 (1283)
Q Consensus 1198 p~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~~D~I~vl~~G~Ive~G 1259 (1283)
|++|||||||++||+++...+.+.|+++.+++|+|++||+++.++.||+|++|++|++++.|
T Consensus 159 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~d~v~~l~~g~i~~~~ 220 (220)
T cd03245 159 PPILLLDEPTSAMDMNSEERLKERLRQLLGDKTLIIITHRPSLLDLVDRIIVMDSGRIVADG 220 (220)
T ss_pred CCEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEeCCeEeecC
Confidence 99999999999999999999999999987668999999999988789999999999998765
No 154
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminus, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resistance lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=1.2e-43 Score=390.07 Aligned_cols=220 Identities=36% Similarity=0.656 Sum_probs=204.9
Q ss_pred ccEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHHhcc
Q 000789 373 GEIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWIREK 452 (1283)
Q Consensus 373 ~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~ 452 (1283)
+.|+++|++++|++. ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.+.+...+++.
T Consensus 1 ~~l~~~~l~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 79 (221)
T cd03244 1 GDIEFKNVSLRYRPN-LPPVLKNISFSIKPGEKVGIVGRTGSGKSSLLLALFRLVELSSGSILIDGVDISKIGLHDLRSR 79 (221)
T ss_pred CcEEEEEEEEecCCC-CcccccceEEEECCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhHhCCHHHHhhh
Confidence 358999999999743 2469999999999999999999999999999999999999999999999999988888888999
Q ss_pred cEEEccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHhcCC
Q 000789 453 IGLVSQEPILFATSLRENIAYGKENATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARAILKNP 532 (1283)
Q Consensus 453 i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARal~~~~ 532 (1283)
++|++|++.+|+.|++||+.+... ...+++.++++..++.+++..+|.|+++..++.+.+||||||||++|||||+.+|
T Consensus 80 i~~~~q~~~l~~~tv~enl~~~~~-~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~~~LS~G~~qr~~laral~~~p 158 (221)
T cd03244 80 ISIIPQDPVLFSGTIRSNLDPFGE-YSDEELWQALERVGLKEFVESLPGGLDTVVEEGGENLSVGQRQLLCLARALLRKS 158 (221)
T ss_pred EEEECCCCccccchHHHHhCcCCC-CCHHHHHHHHHHhCcHHHHHhcccccccccccCCCcCCHHHHHHHHHHHHHhcCC
Confidence 999999999999999999987543 4567788889999999999999999999999999999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhccCEEEEEeCCEEeEecC
Q 000789 533 KILLLDEATSALDAESERIVQDALVKIMTSRTTVVVAHRLTTIRNADLIAVVHQGKIVEKGT 594 (1283)
Q Consensus 533 ~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~ 594 (1283)
+++||||||++||+.+++.+.+.|+++.+++|+|++||+++.+..||++++|++|++++.|+
T Consensus 159 ~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~ 220 (221)
T cd03244 159 KILVLDEATASVDPETDALIQKTIREAFKDCTVLTIAHRLDTIIDSDRILVLDKGRVVEFDS 220 (221)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCeEEecCC
Confidence 99999999999999999999999999877789999999999998899999999999998875
No 155
>COG4615 PvdE ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.2e-41 Score=364.68 Aligned_cols=472 Identities=19% Similarity=0.227 Sum_probs=357.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCChhHHHHHHhhhHHHHHHHHHHHHHHH
Q 000789 762 LIYLVLGIINLIAVPFQNYFFGVAGGKLIRRIRSLTFEKVVHQEISWFDDPANSSGSVGARLSTDASTIRSLVGDSLALV 841 (1283)
Q Consensus 762 ~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~ff~~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~ 841 (1283)
..|+++..+..+.+.+........+++...++|.++.++++..|+.-+++ -..++++.++++|+.++. +-...++.+
T Consensus 52 ~~f~~llllf~~ss~is~lg~t~~gq~~I~klr~~~~~kil~tplerier--~~~~rlla~L~~Dvr~IS-f~~s~lp~~ 128 (546)
T COG4615 52 PEFLGLLLLFMVSSLISQLGLTTLGQHFIYKLRSEFIKKILDTPLERIER--LGSARLLAGLTSDVRNIS-FAFSRLPEL 128 (546)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHH--hcccchhhhhccccccee-ehHhhhHHH
Confidence 33444444444555566667778899999999999999999999999985 789999999999999998 555667778
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhccHHHH
Q 000789 842 VQNIATIAAGLIIAFTANWILAFVILAVSPLMLVQGYTQTKFMKGFSADAKLMYEEASQVANDAVGSIRTVASFCSEEKV 921 (1283)
Q Consensus 842 ~~~~~~~~~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~ 921 (1283)
.++...+++++..+.+.++++.+++++.+.+.++..++......+.....++.+.+.....+..++|.++++...--.+.
T Consensus 129 ~qa~il~l~s~aYLayLSp~mf~l~vV~ivv~~~~~~~~m~rv~k~~~aare~ed~Lq~~y~~il~G~KEL~l~r~R~~~ 208 (546)
T COG4615 129 VQAIILTLGSAAYLAYLSPKMFLLTVVWIVVTIWGGFVLMARVYKHMAAARETEDKLQNDYQTILEGRKELTLNRERAEY 208 (546)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcchhhheechHHHHH
Confidence 88899999999999999999888888877777777766666555567777788888889999999999988765332221
Q ss_pred HHHHHHHHhcHHHhHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHH
Q 000789 922 MDLYEKKCEGPLKNGVRRGILSG----AGFGFSFLVLYCTNAFCFYIGSVLVEHGKATFGQVFKVFFALTISALGVSQTS 997 (1283)
Q Consensus 922 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~g~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 997 (1283)
.+.+......+...+...... ....++..+++......+|+...... .+.....++...+.+.-.|+.++.
T Consensus 209 --~h~~~~~~~a~~~r~~~~~~n~f~~la~~~~ni~l~~lIGlvf~lal~~~w---~st~~a~tivlvlLflr~pL~s~v 283 (546)
T COG4615 209 --VHNNLYIPDAQEYRHHIIRANTFHLLAVNWSNIMLLGLIGLVFWLALSLGW---ASTNVAATIVLVLLFLRTPLLSAV 283 (546)
T ss_pred --HHhhhcCcchHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc---chhhHHHHHHHHHHHHhhHHHHHH
Confidence 122222222222222111111 22233444455555555555443332 233333344445566678999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCCCCCCcCCccCCCcccEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCC
Q 000789 998 AMAPDTTKAKDSAASIFEILDSKPKIDSSKDEGMTLSSVGGAIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGES 1077 (1283)
Q Consensus 998 ~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~S 1077 (1283)
...|.+..+..+.+++.++-..++..+...+. +.|.. ..|+++||.|+|++. .--+..||++|++||.|-|+|.|
T Consensus 284 gilP~l~~AqvA~~kiakle~~~~~a~~~~~q--~~p~~-~~lelrnvrfay~~~--~FhvgPiNl~ikrGelvFliG~N 358 (546)
T COG4615 284 GILPTLLTAQVAFNKIAKLELAPYKADFPRPQ--AFPDW-KTLELRNVRFAYQDN--AFHVGPINLTIKRGELVFLIGGN 358 (546)
T ss_pred hhhhHHHHHHHHHHHHHHhhcCCccccCCCCC--cCCcc-cceeeeeeeeccCcc--cceecceeeEEecCcEEEEECCC
Confidence 99999999999999999887654433322221 11222 369999999999853 24588999999999999999999
Q ss_pred CCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHhcceEEEccCCCCChhhHHHHHhcCCCCCCCHHHHHHHHHHhC
Q 000789 1078 GSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMGLVSQEPVLFNETIRTNIAYGKQGGATEEEIIAATEASN 1157 (1283)
Q Consensus 1078 GSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~ 1157 (1283)
||||||++++|.|+|.|++|+|++||.+++.-+++++|+-++-|+-|.+||+.++ |....++++.+..-+++-.
T Consensus 359 GsGKST~~~LLtGL~~PqsG~I~ldg~pV~~e~ledYR~LfSavFsDyhLF~~ll------~~e~~as~q~i~~~LqrLe 432 (546)
T COG4615 359 GSGKSTLAMLLTGLYQPQSGEILLDGKPVSAEQLEDYRKLFSAVFSDYHLFDQLL------GPEGKASPQLIEKWLQRLE 432 (546)
T ss_pred CCcHHHHHHHHhcccCCCCCceeECCccCCCCCHHHHHHHHHHHhhhHhhhHhhh------CCccCCChHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999998764 4344478888877777665
Q ss_pred hHHHHHhCCCCcccccCCCCCCCChhHHHHHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHc--CCceEEEEe
Q 000789 1158 AHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVM--VNRTTVVVA 1235 (1283)
Q Consensus 1158 l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~--~~~TvI~Ia 1235 (1283)
+.... ++-+|-=+ ...||-|||.|+|+--|++-+.+|++|||=-+--||.=.+...+.+--.. .|||++.||
T Consensus 433 l~~kt-sl~d~~fs-----~~kLStGQkKRlAll~AllEeR~Ilv~DEWAADQDPaFRR~FY~~lLp~LK~qGKTI~aIs 506 (546)
T COG4615 433 LAHKT-SLNDGRFS-----NLKLSTGQKKRLALLLALLEERDILVLDEWAADQDPAFRREFYQVLLPLLKEQGKTIFAIS 506 (546)
T ss_pred Hhhhh-cccCCccc-----ccccccchHHHHHHHHHHHhhCCeEEeehhhccCChHHHHHHHHHHhHHHHHhCCeEEEEe
Confidence 54432 22222211 13799999999999999999999999999999999999999998875543 489999999
Q ss_pred cCchHHhhcCEEEEEeCCEEEEe
Q 000789 1236 HRLTTIKNADIIAVVKNGVIAEQ 1258 (1283)
Q Consensus 1236 Hrl~ti~~~D~I~vl~~G~Ive~ 1258 (1283)
|+-.--..|||++.|++|+++|.
T Consensus 507 HDd~YF~~ADrll~~~~G~~~e~ 529 (546)
T COG4615 507 HDDHYFIHADRLLEMRNGQLSEL 529 (546)
T ss_pred cCchhhhhHHHHHHHhcCceeec
Confidence 99999999999999999999986
No 156
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-43 Score=405.65 Aligned_cols=221 Identities=25% Similarity=0.447 Sum_probs=187.1
Q ss_pred cEEEEEEEEECCCCC--CcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCC-------
Q 000789 1039 AIELRCVSFKYPTRP--DVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKF------- 1109 (1283)
Q Consensus 1039 ~I~~~nVsf~Y~~~~--~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~------- 1109 (1283)
.|+++||+|+|+... ..++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||+++.+.
T Consensus 21 ~l~~~nl~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~~G~I~i~g~~~~~~~~~~~~~ 100 (320)
T PRK13631 21 ILRVKNLYCVFDEKQENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSKYGTIQVGDIYIGDKKNNHELI 100 (320)
T ss_pred eEEEEeEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCEEccccccccccc
Confidence 599999999997421 23699999999999999999999999999999999999999999999999998653
Q ss_pred ---------ChHHHhcceEEEccCC--CCChhhHHHHHhcCCC-CCCCHHHHHHHHHHhChHHHHHhCCCCcc-cccCCC
Q 000789 1110 ---------KLSWLRQQMGLVSQEP--VLFNETIRTNIAYGKQ-GGATEEEIIAATEASNAHNFISALPHGYE-TNVGER 1176 (1283)
Q Consensus 1110 ---------~~~~lR~~i~~V~Qdp--~Lf~gTIreNl~~g~~-~~~sd~ei~~al~~a~l~~~I~~lp~Gld-t~vge~ 1176 (1283)
+...+|++++||+|+| .+|+.|++||+.++.. ...++++..+. +.+++..+ |++ ......
T Consensus 101 ~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~-----~~~~l~~~--gL~~~~~~~~ 173 (320)
T PRK13631 101 TNPYSKKIKNFKELRRRVSMVFQFPEYQLFKDTIEKDIMFGPVALGVKKSEAKKL-----AKFYLNKM--GLDDSYLERS 173 (320)
T ss_pred ccccccccchHHHHHhcEEEEEECchhccccchHHHHHHhhHHhcCCCHHHHHHH-----HHHHHHHc--CCChhHhcCC
Confidence 3567899999999998 6999999999987632 12344443221 12344444 454 345677
Q ss_pred CCCCChhHHHHHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchHHh-hcCEEEEEeCCE
Q 000789 1177 GVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVM-VNRTTVVVAHRLTTIK-NADIIAVVKNGV 1254 (1283)
Q Consensus 1177 G~~LSgGQrQRlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHrl~ti~-~~D~I~vl~~G~ 1254 (1283)
+.+||||||||++|||||+++|+|||||||||+||+.++..+.+.|+++. +++|+|+|||+++.+. .||+|++|++|+
T Consensus 174 ~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~~~~~~adri~vl~~G~ 253 (320)
T PRK13631 174 PFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTMEHVLEVADEVIVMDKGK 253 (320)
T ss_pred cccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCE
Confidence 78999999999999999999999999999999999999999999998764 5789999999999875 599999999999
Q ss_pred EEEecChHHHHh
Q 000789 1255 IAEQGSHDALMK 1266 (1283)
Q Consensus 1255 Ive~Gt~~eLl~ 1266 (1283)
+++.|+|+++.+
T Consensus 254 i~~~g~~~~~~~ 265 (320)
T PRK13631 254 ILKTGTPYEIFT 265 (320)
T ss_pred EEEeCCHHHHhc
Confidence 999999998754
No 157
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=3.4e-44 Score=403.51 Aligned_cols=219 Identities=34% Similarity=0.554 Sum_probs=197.7
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHhcce
Q 000789 1039 AIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQM 1118 (1283)
Q Consensus 1039 ~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i 1118 (1283)
.|+++||+.+|+ +..+++|+||+|++||.++++|||||||||++++|+||..|++|+|.+||.|+.+++++ ++.|
T Consensus 5 ~l~i~~v~k~yg---~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~~G~I~l~G~~i~~lpp~--kR~i 79 (352)
T COG3842 5 ALEIRNVSKSFG---DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPSSGEILLDGEDITDVPPE--KRPI 79 (352)
T ss_pred eEEEEeeeeecC---CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChh--hccc
Confidence 699999999997 35699999999999999999999999999999999999999999999999999998876 6899
Q ss_pred EEEccCCCCC-hhhHHHHHhcCCC--CCCCH----HHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHH
Q 000789 1119 GLVSQEPVLF-NETIRTNIAYGKQ--GGATE----EEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIA 1191 (1283)
Q Consensus 1119 ~~V~Qdp~Lf-~gTIreNl~~g~~--~~~sd----~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiA 1191 (1283)
++|+|+..|| +.||+||++||.. ....+ +.+.++++.+++.++-.+.|. +|||||+||+|||
T Consensus 80 g~VFQ~YALFPHltV~~NVafGLk~~~~~~~~~i~~rv~e~L~lV~L~~~~~R~p~-----------qLSGGQqQRVALA 148 (352)
T COG3842 80 GMVFQSYALFPHMTVEENVAFGLKVRKKLKKAEIKARVEEALELVGLEGFADRKPH-----------QLSGGQQQRVALA 148 (352)
T ss_pred ceeecCcccCCCCcHHHHhhhhhhhcCCCCHHHHHHHHHHHHHHcCchhhhhhChh-----------hhChHHHHHHHHH
Confidence 9999999999 6799999999854 11232 367889999999998777764 8999999999999
Q ss_pred HHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHc--CCceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHHHhcc
Q 000789 1192 RAVLKNPKILLLDEATSALDAESERVVQDALERVM--VNRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDALMKIT 1268 (1283)
Q Consensus 1192 RAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~--~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl~~~ 1268 (1283)
|||..+|++||||||-||||.+-...++.-++++. .+.|.|+|||+-+.... +|||+||++|+|.+.|+|+|+...+
T Consensus 149 RAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqeEAl~msDrI~Vm~~G~I~Q~gtP~eiY~~P 228 (352)
T COG3842 149 RALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQEEALAMSDRIAVMNDGRIEQVGTPEEIYERP 228 (352)
T ss_pred HHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhccceEEccCCceeecCCHHHHhhCc
Confidence 99999999999999999999999999999998764 37899999999887654 9999999999999999999999987
Q ss_pred CchhH
Q 000789 1269 DGAYA 1273 (1283)
Q Consensus 1269 ~g~y~ 1273 (1283)
...|-
T Consensus 229 ~~~fV 233 (352)
T COG3842 229 ATRFV 233 (352)
T ss_pred chHHH
Confidence 66654
No 158
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.6e-44 Score=367.05 Aligned_cols=215 Identities=34% Similarity=0.531 Sum_probs=190.8
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCC---hHHHh
Q 000789 1039 AIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFK---LSWLR 1115 (1283)
Q Consensus 1039 ~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~---~~~lR 1115 (1283)
.|+++||+.+||+ .+.+|+||||+|++||.|||+|+||||||||+++|.|+.+|++|+|+++|.++...+ +..+|
T Consensus 3 ~i~~~nl~k~yp~--~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t~G~i~~~g~~i~~~~~k~lr~~r 80 (258)
T COG3638 3 MIEVKNLSKTYPG--GHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPTSGEILFNGVQITKLKGKELRKLR 80 (258)
T ss_pred eEEEeeeeeecCC--CceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCCcceEEecccchhccchHHHHHHH
Confidence 4899999999984 467999999999999999999999999999999999999999999999999998887 66778
Q ss_pred cceEEEccCCCCC-hhhHHHHHhcCCCC----------CCCH---HHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCC
Q 000789 1116 QQMGLVSQEPVLF-NETIRTNIAYGKQG----------GATE---EEIIAATEASNAHNFISALPHGYETNVGERGVQLS 1181 (1283)
Q Consensus 1116 ~~i~~V~Qdp~Lf-~gTIreNl~~g~~~----------~~sd---~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LS 1181 (1283)
++||+|+|.+-|- ..|+.+|+..|..+ -.+. ....+|++++++.+..-. +..+||
T Consensus 81 ~~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~~A~q-----------ra~~LS 149 (258)
T COG3638 81 RDIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILDKAYQ-----------RASTLS 149 (258)
T ss_pred HhceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHHHHHH-----------HhccCC
Confidence 9999999999887 56999999766432 1233 346778888888877532 345899
Q ss_pred hhHHHHHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHc--CCceEEEEecCchHHhh-cCEEEEEeCCEEEEe
Q 000789 1182 GGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVM--VNRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQ 1258 (1283)
Q Consensus 1182 gGQrQRlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~--~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~ 1258 (1283)
|||+||++|||||..+|+|++-|||||+|||.+.+.|++.|++.. .|.|+|+.-|.++..+. ||||+-|++|+|+..
T Consensus 150 GGQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdlA~~Y~~Riigl~~G~ivfD 229 (258)
T COG3638 150 GGQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDLAKKYADRIIGLKAGRIVFD 229 (258)
T ss_pred cchhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHHhhheEecCCcEEEe
Confidence 999999999999999999999999999999999999999999874 57899999999999977 999999999999999
Q ss_pred cChHHHHh
Q 000789 1259 GSHDALMK 1266 (1283)
Q Consensus 1259 Gt~~eLl~ 1266 (1283)
|+++||-+
T Consensus 230 g~~~el~~ 237 (258)
T COG3638 230 GPASELTD 237 (258)
T ss_pred CChhhhhH
Confidence 99999643
No 159
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.4e-44 Score=381.94 Aligned_cols=217 Identities=35% Similarity=0.559 Sum_probs=185.3
Q ss_pred cEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCc---ccCCCCHHHHh
Q 000789 374 EIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGI---DIKKLQLKWIR 450 (1283)
Q Consensus 374 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~---~~~~~~~~~~r 450 (1283)
.|+++|+++.|+. .++++|||++|+.||.+|+.||||||||||+++|+|+..|++|+|.+||. |.++.+ .-.
T Consensus 2 ~i~i~~~~~~~~~---~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~~G~I~~~~~~l~D~~~~~--~~~ 76 (345)
T COG1118 2 SIRINNVKKRFGA---FGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPDAGRIRLNGRVLFDVSNLA--VRD 76 (345)
T ss_pred ceeehhhhhhccc---ccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCCCceEEECCEeccchhccc--hhh
Confidence 4788999999974 46899999999999999999999999999999999999999999999999 655533 334
Q ss_pred cccEEEccCCCCCc-ccHHHHHhcCCCC--------CCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHH
Q 000789 451 EKIGLVSQEPILFA-TSLRENIAYGKEN--------ATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQR 521 (1283)
Q Consensus 451 ~~i~~v~Q~~~l~~-~ti~~ni~~~~~~--------~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqr 521 (1283)
++||+|+|+..||. .||++||+||.+- ....++.+.++.++++.+-++. +.+||||||||
T Consensus 77 R~VGfvFQ~YALF~HmtVa~NIAFGl~~~~~~p~~~~~r~rv~elL~lvqL~~la~ry-----------P~QLSGGQrQR 145 (345)
T COG1118 77 RKVGFVFQHYALFPHMTVADNIAFGLKVRKERPSEAEIRARVEELLRLVQLEGLADRY-----------PAQLSGGQRQR 145 (345)
T ss_pred cceeEEEechhhcccchHHhhhhhcccccccCCChhhHHHHHHHHHHHhcccchhhcC-----------chhcChHHHHH
Confidence 68999999999986 5999999999731 1223445555555555444444 46999999999
Q ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHH
Q 000789 522 IAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMT--SRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDEL 598 (1283)
Q Consensus 522 iaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l 598 (1283)
|||||||..+|++||||||+++||++-.+.+.+.|+++.. +.|+++|||+.+++.. ||||++|++|+|...|+++|.
T Consensus 146 VALARALA~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~eea~~ladrvvvl~~G~Ieqvg~p~ev 225 (345)
T COG1118 146 VALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQEEALELADRVVVLNQGRIEQVGPPDEV 225 (345)
T ss_pred HHHHHHhhcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHHHHHhhcceEEEecCCeeeeeCCHHHH
Confidence 9999999999999999999999999999999999998754 6899999999999765 999999999999999999999
Q ss_pred hcCCCChh
Q 000789 599 IKDPEGPY 606 (1283)
Q Consensus 599 ~~~~~~~~ 606 (1283)
...|...+
T Consensus 226 ~~~P~s~f 233 (345)
T COG1118 226 YDHPASRF 233 (345)
T ss_pred hcCCCccc
Confidence 88765443
No 160
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=2e-43 Score=373.29 Aligned_cols=207 Identities=35% Similarity=0.515 Sum_probs=174.9
Q ss_pred EEEEEEEEECCCCC-CcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCCh---HHH-
Q 000789 1040 IELRCVSFKYPTRP-DVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKL---SWL- 1114 (1283)
Q Consensus 1040 I~~~nVsf~Y~~~~-~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~---~~l- 1114 (1283)
++++||+..|.... ...+|+++||+|++||.|||+||||||||||+++|.++..|++|.|.++|.|+..++- ..+
T Consensus 2 i~~~~v~k~y~~~~~~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt~G~v~i~g~d~~~l~~~~~~~~R 81 (226)
T COG1136 2 IELKNVSKIYGLGGEKVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPTSGEVLINGKDLTKLSEKELAKLR 81 (226)
T ss_pred cEEeeeEEEeccCCcceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEcCcCCHHHHHHHH
Confidence 67999999997432 2479999999999999999999999999999999999999999999999999998884 334
Q ss_pred hcceEEEccCCCCC-hhhHHHHHhc----CCCCC-CCHHHHHHHHHHhChHHHHH-hCCCCcccccCCCCCCCChhHHHH
Q 000789 1115 RQQMGLVSQEPVLF-NETIRTNIAY----GKQGG-ATEEEIIAATEASNAHNFIS-ALPHGYETNVGERGVQLSGGQKQR 1187 (1283)
Q Consensus 1115 R~~i~~V~Qdp~Lf-~gTIreNl~~----g~~~~-~sd~ei~~al~~a~l~~~I~-~lp~Gldt~vge~G~~LSgGQrQR 1187 (1283)
|++||+|+|+..|+ +.|++||+.+ ..... ..++.+.+.++..++.+... ..| .+||||||||
T Consensus 82 ~~~iGfvFQ~~nLl~~ltv~ENv~lpl~~~~~~~~~~~~~~~~l~~~lgl~~~~~~~~p-----------~eLSGGqqQR 150 (226)
T COG1136 82 RKKIGFVFQNFNLLPDLTVLENVELPLLIAGKSAGRRKRAAEELLEVLGLEDRLLKKKP-----------SELSGGQQQR 150 (226)
T ss_pred HHhEEEECccCCCCCCCCHHHHHHhHHHHcCCChhHHHHHHHHHHHhcCChhhhccCCc-----------hhcCHHHHHH
Confidence 46799999999877 5699999984 21111 12344555666666665544 333 4899999999
Q ss_pred HHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHc--CCceEEEEecCchHHhhcCEEEEEeCCEEEE
Q 000789 1188 IAIARAVLKNPKILLLDEATSALDAESERVVQDALERVM--VNRTTVVVAHRLTTIKNADIIAVVKNGVIAE 1257 (1283)
Q Consensus 1188 laiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~--~~~TvI~IaHrl~ti~~~D~I~vl~~G~Ive 1257 (1283)
+||||||+.+|+|++.||||.+||++|.+.|.+.+++.. .++|+|+|||+......|||++.|.+|++.+
T Consensus 151 VAIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~~lA~~~dr~i~l~dG~~~~ 222 (226)
T COG1136 151 VAIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDPELAKYADRVIELKDGKIEE 222 (226)
T ss_pred HHHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHhCCEEEEEeCCeeee
Confidence 999999999999999999999999999999999999985 3689999999999999999999999999543
No 161
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.5e-43 Score=379.32 Aligned_cols=210 Identities=29% Similarity=0.523 Sum_probs=184.1
Q ss_pred cEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHHhccc
Q 000789 374 EIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWIREKI 453 (1283)
Q Consensus 374 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 453 (1283)
.|+++|++|+|.++ ++|+||||++++|++++|+||||||||||+|+|+|+.+|++|+|.++|.+++.... +.+|
T Consensus 4 ~i~v~nl~v~y~~~---~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~~G~i~~~g~~~~~~~~---~~~I 77 (254)
T COG1121 4 MIEVENLTVSYGNR---PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPSSGEIKIFGKPVRKRRK---RLRI 77 (254)
T ss_pred EEEEeeeEEEECCE---eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCcceEEEcccccccccc---CCeE
Confidence 58999999999742 59999999999999999999999999999999999999999999999988765432 4689
Q ss_pred EEEccCC---CCCcccHHHHHhcCCCCC----------CHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHH
Q 000789 454 GLVSQEP---ILFATSLRENIAYGKENA----------TDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQ 520 (1283)
Q Consensus 454 ~~v~Q~~---~l~~~ti~~ni~~~~~~~----------~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkq 520 (1283)
|||||.. +-|+-||+|-+.+|.... +.+++.++++.+++.++.++ .-..|||||+|
T Consensus 78 gYVPQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~~~~~r-----------~i~~LSGGQ~Q 146 (254)
T COG1121 78 GYVPQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGMEDLRDR-----------QIGELSGGQKQ 146 (254)
T ss_pred EEcCcccccCCCCCcCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCchhhhCC-----------cccccCcHHHH
Confidence 9999965 568889999999985321 23678888888887766543 34579999999
Q ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC-CCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHH
Q 000789 521 RIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMT-SRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDEL 598 (1283)
Q Consensus 521 riaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~-~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l 598 (1283)
|+.|||||+++|++|+|||||+++|+.++..+.+.|.++++ |+|+++||||++.+.. +|+|+.|+ ++++..|++++.
T Consensus 147 RV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~~v~~~~D~vi~Ln-~~~~~~G~~~~~ 225 (254)
T COG1121 147 RVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLGLVMAYFDRVICLN-RHLIASGPPEEV 225 (254)
T ss_pred HHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcHHhHhhCCEEEEEc-CeeEeccChhhc
Confidence 99999999999999999999999999999999999999875 7999999999999875 99999995 578899999998
Q ss_pred hcC
Q 000789 599 IKD 601 (1283)
Q Consensus 599 ~~~ 601 (1283)
+..
T Consensus 226 ~~~ 228 (254)
T COG1121 226 LTE 228 (254)
T ss_pred cCH
Confidence 764
No 162
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.5e-43 Score=379.22 Aligned_cols=211 Identities=28% Similarity=0.498 Sum_probs=186.8
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHhcce
Q 000789 1039 AIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQM 1118 (1283)
Q Consensus 1039 ~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i 1118 (1283)
.|+++|++|+|..+ +||+||||+|++|+.++|+||||||||||+|+++|+..|++|+|.++|.++++... +.+|
T Consensus 4 ~i~v~nl~v~y~~~---~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~~G~i~~~g~~~~~~~~---~~~I 77 (254)
T COG1121 4 MIEVENLTVSYGNR---PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPSSGEIKIFGKPVRKRRK---RLRI 77 (254)
T ss_pred EEEEeeeEEEECCE---eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCcceEEEcccccccccc---CCeE
Confidence 59999999999743 49999999999999999999999999999999999999999999999998876543 5789
Q ss_pred EEEccCC---CCChhhHHHHHhcCCCCC---------CCHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHH
Q 000789 1119 GLVSQEP---VLFNETIRTNIAYGKQGG---------ATEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQ 1186 (1283)
Q Consensus 1119 ~~V~Qdp---~Lf~gTIreNl~~g~~~~---------~sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQ 1186 (1283)
|||||.. .-|.-||+|=+.+|.... .+.+++.+||+++++.++. |.++| .|||||+|
T Consensus 78 gYVPQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~~~~-------~r~i~----~LSGGQ~Q 146 (254)
T COG1121 78 GYVPQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGMEDLR-------DRQIG----ELSGGQKQ 146 (254)
T ss_pred EEcCcccccCCCCCcCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCchhhh-------CCccc----ccCcHHHH
Confidence 9999965 458899999998873221 1347899999999999885 34565 59999999
Q ss_pred HHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcC-CceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHH
Q 000789 1187 RIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMV-NRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDAL 1264 (1283)
Q Consensus 1187 RlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~-~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eL 1264 (1283)
|+.|||||+++|++|+|||||+++|+.++..|.+.|+++.+ ||||++|+|+++.+.. ||+|+.|. +++...|++++.
T Consensus 147 RV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~~v~~~~D~vi~Ln-~~~~~~G~~~~~ 225 (254)
T COG1121 147 RVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLGLVMAYFDRVICLN-RHLIASGPPEEV 225 (254)
T ss_pred HHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcHHhHhhCCEEEEEc-CeeEeccChhhc
Confidence 99999999999999999999999999999999999999864 8999999999999876 99999996 578899999998
Q ss_pred Hhc
Q 000789 1265 MKI 1267 (1283)
Q Consensus 1265 l~~ 1267 (1283)
+..
T Consensus 226 ~~~ 228 (254)
T COG1121 226 LTE 228 (254)
T ss_pred cCH
Confidence 863
No 163
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=3.7e-43 Score=385.85 Aligned_cols=220 Identities=43% Similarity=0.735 Sum_probs=201.3
Q ss_pred ccEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHHhcc
Q 000789 373 GEIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWIREK 452 (1283)
Q Consensus 373 ~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~ 452 (1283)
++|+++|+++.|++. ..++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.
T Consensus 1 ~~l~~~~l~~~~~~~-~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 79 (220)
T cd03245 1 GRIEFRNVSFSYPNQ-EIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSVLLDGTDIRQLDPADLRRN 79 (220)
T ss_pred CeEEEEEEEEEcCCC-CcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCeEEECCEEhHHCCHHHHHhh
Confidence 358999999999642 2469999999999999999999999999999999999999999999999999887777777889
Q ss_pred cEEEccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHhcCC
Q 000789 453 IGLVSQEPILFATSLRENIAYGKENATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARAILKNP 532 (1283)
Q Consensus 453 i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARal~~~~ 532 (1283)
++|++|++.+|..|+.||+.++.+....+++.+.++..++.+.++.+|.|++|.+.+...+||||||||++||||++.+|
T Consensus 80 i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~la~al~~~p 159 (220)
T cd03245 80 IGYVPQDVTLFYGTLRDNITLGAPLADDERILRAAELAGVTDFVNKHPNGLDLQIGERGRGLSGGQRQAVALARALLNDP 159 (220)
T ss_pred EEEeCCCCccccchHHHHhhcCCCCCCHHHHHHHHHHcCcHHHHHhccccccceecCCCccCCHHHHHHHHHHHHHhcCC
Confidence 99999999999899999999875544556777888888999999999999999999999999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhccCEEEEEeCCEEeEec
Q 000789 533 KILLLDEATSALDAESERIVQDALVKIMTSRTTVVVAHRLTTIRNADLIAVVHQGKIVEKG 593 (1283)
Q Consensus 533 ~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g 593 (1283)
++|||||||++||+.+...+.+.|+++.+++|+|++||+++.++.||+|++|++|++++.|
T Consensus 160 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~d~v~~l~~g~i~~~~ 220 (220)
T cd03245 160 PILLLDEPTSAMDMNSEERLKERLRQLLGDKTLIIITHRPSLLDLVDRIIVMDSGRIVADG 220 (220)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEeCCeEeecC
Confidence 9999999999999999999999999987668999999999988779999999999998754
No 164
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.9e-43 Score=402.96 Aligned_cols=222 Identities=27% Similarity=0.482 Sum_probs=191.0
Q ss_pred ccEEEEEEEEECCCCC--CCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCC------
Q 000789 373 GEIELRDVYFRYPARP--EVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKL------ 444 (1283)
Q Consensus 373 ~~i~~~~v~f~y~~~~--~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~------ 444 (1283)
..|+++||+|+|++.. ..++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|+++.+.
T Consensus 20 ~~l~~~nl~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~~G~I~i~g~~~~~~~~~~~~ 99 (320)
T PRK13631 20 IILRVKNLYCVFDEKQENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSKYGTIQVGDIYIGDKKNNHEL 99 (320)
T ss_pred ceEEEEeEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCEEcccccccccc
Confidence 3599999999997421 23699999999999999999999999999999999999999999999999998653
Q ss_pred ----------CHHHHhcccEEEccCC--CCCcccHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhCCCCcc-ccccC
Q 000789 445 ----------QLKWIREKIGLVSQEP--ILFATSLRENIAYGKE--NATDQEIRTAIELANAAKFIDKLPKGLD-TMAGE 509 (1283)
Q Consensus 445 ----------~~~~~r~~i~~v~Q~~--~l~~~ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~lp~g~~-t~~~~ 509 (1283)
+...+|++|+||+|+| .+|+.||+|||.++.. ..+.++..+ .+.++++.+ |++ ...++
T Consensus 100 ~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~-----~~~~~l~~~--gL~~~~~~~ 172 (320)
T PRK13631 100 ITNPYSKKIKNFKELRRRVSMVFQFPEYQLFKDTIEKDIMFGPVALGVKKSEAKK-----LAKFYLNKM--GLDDSYLER 172 (320)
T ss_pred cccccccccchHHHHHhcEEEEEECchhccccchHHHHHHhhHHhcCCCHHHHHH-----HHHHHHHHc--CCChhHhcC
Confidence 3456789999999998 6899999999998742 223333221 223566666 775 56788
Q ss_pred CCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhh-ccCEEEEEeCC
Q 000789 510 HGTQLSGGQKQRIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIM-TSRTTVVVAHRLTTIR-NADLIAVVHQG 587 (1283)
Q Consensus 510 ~g~~LSgGqkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~-~~d~i~vl~~G 587 (1283)
.+.+||||||||++|||||+++|+||||||||++||+.+++.+.+.|.++. +++|+|+|||+++.+. .||+|++|++|
T Consensus 173 ~~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~~~~~~adri~vl~~G 252 (320)
T PRK13631 173 SPFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTMEHVLEVADEVIVMDKG 252 (320)
T ss_pred CcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECC
Confidence 899999999999999999999999999999999999999999999998874 4789999999999875 59999999999
Q ss_pred EEeEecChhHHhcC
Q 000789 588 KIVEKGTHDELIKD 601 (1283)
Q Consensus 588 ~i~~~g~~~~l~~~ 601 (1283)
+|++.|+++++...
T Consensus 253 ~i~~~g~~~~~~~~ 266 (320)
T PRK13631 253 KILKTGTPYEIFTD 266 (320)
T ss_pred EEEEeCCHHHHhcC
Confidence 99999999999765
No 165
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.3e-43 Score=373.41 Aligned_cols=198 Identities=38% Similarity=0.534 Sum_probs=176.6
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHhcce
Q 000789 1039 AIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQM 1118 (1283)
Q Consensus 1039 ~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i 1118 (1283)
.+++++|+++|+. ..||+|+||+|++||.|+|+||||||||||++++.|+.+|++|+|.++|.++..- ...+
T Consensus 3 ~l~i~~v~~~f~~---~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~~G~V~~~g~~v~~p-----~~~~ 74 (248)
T COG1116 3 LLEIEGVSKSFGG---VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPTSGEVLLDGRPVTGP-----GPDI 74 (248)
T ss_pred eEEEEeeEEEeCc---eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCcccCCC-----CCCE
Confidence 4899999999985 5699999999999999999999999999999999999999999999999988543 3579
Q ss_pred EEEccCCCCCh-hhHHHHHhcCCCCC-C----CHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHHH
Q 000789 1119 GLVSQEPVLFN-ETIRTNIAYGKQGG-A----TEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIAR 1192 (1283)
Q Consensus 1119 ~~V~Qdp~Lf~-gTIreNl~~g~~~~-~----sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiAR 1192 (1283)
+||+|++.||. -||+||+.++.... . ..+.+.+.++.+|+.+|-+..|. +||||||||+||||
T Consensus 75 ~~vFQ~~~LlPW~Tv~~NV~l~l~~~~~~~~e~~~~a~~~L~~VgL~~~~~~~P~-----------qLSGGMrQRVaiAR 143 (248)
T COG1116 75 GYVFQEDALLPWLTVLDNVALGLELRGKSKAEARERAKELLELVGLAGFEDKYPH-----------QLSGGMRQRVAIAR 143 (248)
T ss_pred EEEeccCcccchhhHHhhheehhhccccchHhHHHHHHHHHHHcCCcchhhcCcc-----------ccChHHHHHHHHHH
Confidence 99999999997 59999999874311 1 23468889999999999888875 89999999999999
Q ss_pred HHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchHHhh-cCEEEEEeC--CEE
Q 000789 1193 AVLKNPKILLLDEATSALDAESERVVQDALERVMV--NRTTVVVAHRLTTIKN-ADIIAVVKN--GVI 1255 (1283)
Q Consensus 1193 All~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~D~I~vl~~--G~I 1255 (1283)
||+.+|+||+||||.+|||+.|...+|+.+.++.+ ++||++|||+.+.... +|||+||.+ |+|
T Consensus 144 AL~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~EAv~LsdRivvl~~~P~~i 211 (248)
T COG1116 144 ALATRPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVDEAVYLADRVVVLSNRPGRI 211 (248)
T ss_pred HHhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHhhhCEEEEecCCCcce
Confidence 99999999999999999999999999999988753 5899999999988765 999999999 555
No 166
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.8e-43 Score=392.12 Aligned_cols=218 Identities=33% Similarity=0.517 Sum_probs=185.9
Q ss_pred EEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCCh---HHHhc
Q 000789 1040 IELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKL---SWLRQ 1116 (1283)
Q Consensus 1040 I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~---~~lR~ 1116 (1283)
|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+. ..+|+
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~~ 77 (235)
T cd03261 1 IELRGLTKSFGG---RTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPDSGEVLIDGEDISGLSEAELYRLRR 77 (235)
T ss_pred CeEEEEEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccChhhHHHHhc
Confidence 578999999973 359999999999999999999999999999999999999999999999999987664 56789
Q ss_pred ceEEEccCCCCChh-hHHHHHhcCCC--CCCCHH----HHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHH
Q 000789 1117 QMGLVSQEPVLFNE-TIRTNIAYGKQ--GGATEE----EIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIA 1189 (1283)
Q Consensus 1117 ~i~~V~Qdp~Lf~g-TIreNl~~g~~--~~~sd~----ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRla 1189 (1283)
.++||||++.+|.. |++||+.++.. ...+.+ ++.++++..++.++.. ....+||||||||++
T Consensus 78 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LSgG~~qrv~ 146 (235)
T cd03261 78 RMGMLFQSGALFDSLTVFENVAFPLREHTRLSEEEIREIVLEKLEAVGLRGAED-----------LYPAELSGGMKKRVA 146 (235)
T ss_pred ceEEEccCcccCCCCcHHHHHHHHHhhccCCCHHHHHHHHHHHHHHcCCchhhc-----------CChhhCCHHHHHHHH
Confidence 99999999999875 99999986521 112332 3455566555544332 233479999999999
Q ss_pred HHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHHHh
Q 000789 1190 IARAVLKNPKILLLDEATSALDAESERVVQDALERVMV--NRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDALMK 1266 (1283)
Q Consensus 1190 iARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl~ 1266 (1283)
|||||+++|+||||||||++||+.+...+.+.|+++.+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 147 ia~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 226 (235)
T cd03261 147 LARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLDTAFAIADRIAVLYDGKIVAEGTPEELRA 226 (235)
T ss_pred HHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhcCEEEEEECCeEEEecCHHHHcC
Confidence 99999999999999999999999999999999998753 7899999999999876 99999999999999999999986
Q ss_pred ccCchh
Q 000789 1267 ITDGAY 1272 (1283)
Q Consensus 1267 ~~~g~y 1272 (1283)
. ...|
T Consensus 227 ~-~~~~ 231 (235)
T cd03261 227 S-DDPL 231 (235)
T ss_pred C-CChh
Confidence 4 4444
No 167
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=100.00 E-value=4.1e-43 Score=387.04 Aligned_cols=219 Identities=51% Similarity=0.833 Sum_probs=199.4
Q ss_pred CcccEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHh
Q 000789 1036 VGGAIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLR 1115 (1283)
Q Consensus 1036 ~~g~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR 1115 (1283)
..+.|+++|++++|+++...++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||.++...+...+|
T Consensus 8 ~~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~ 87 (226)
T cd03248 8 LKGIVKFQNVTFAYPTRPDTLVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQPQGGQVLLDGKPISQYEHKYLH 87 (226)
T ss_pred cCceEEEEEEEEEeCCCCCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCcEEEECCCchHHcCHHHHH
Confidence 45679999999999753234699999999999999999999999999999999999999999999999999887777888
Q ss_pred cceEEEccCCCCChhhHHHHHhcCCCCCCCHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHHHHHc
Q 000789 1116 QQMGLVSQEPVLFNETIRTNIAYGKQGGATEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVL 1195 (1283)
Q Consensus 1116 ~~i~~V~Qdp~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiARAll 1195 (1283)
+.++|+||++.+|+.|++||+.++.. ....+++.+..+..++.++++.+|.|+++.+.....+||||||||++||||++
T Consensus 88 ~~i~~~~q~~~l~~~tv~~nl~~~~~-~~~~~~~~~~~~~~~~~~~l~~l~~gl~~~~~~~~~~LSgG~~qrv~laral~ 166 (226)
T cd03248 88 SKVSLVGQEPVLFARSLQDNIAYGLQ-SCSFECVKEAAQKAHAHSFISELASGYDTEVGEKGSQLSGGQKQRVAIARALI 166 (226)
T ss_pred hhEEEEecccHHHhhhHHHHhccccC-CCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHh
Confidence 99999999999999999999987632 34455666667778889999999999999999999999999999999999999
Q ss_pred cCCCEEEEecccCCCCHHHHHHHHHHHHHHcCCceEEEEecCchHHhhcCEEEEEeCCEE
Q 000789 1196 KNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVI 1255 (1283)
Q Consensus 1196 ~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~~D~I~vl~~G~I 1255 (1283)
++|++|||||||++||+++.+.+.+.|+++.+++|+|+|||+++.+..||+|++|++|++
T Consensus 167 ~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~i 226 (226)
T cd03248 167 RNPQVLILDEATSALDAESEQQVQQALYDWPERRTVLVIAHRLSTVERADQILVLDGGRI 226 (226)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEECCHHHHHhCCEEEEecCCcC
Confidence 999999999999999999999999999998777899999999999988999999999974
No 168
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=2.1e-43 Score=389.64 Aligned_cols=213 Identities=36% Similarity=0.589 Sum_probs=184.9
Q ss_pred EEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccC-----CCCcceEEECCccCCCCC--hH
Q 000789 1040 IELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFY-----DPDSGHVLLDNIELPKFK--LS 1112 (1283)
Q Consensus 1040 I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~-----~~~~G~I~idG~di~~~~--~~ 1112 (1283)
|+++||+++|+++ ++|+|+||+|++||++||+|+||||||||+++|+|++ +|++|+|.++|.++.+.+ ..
T Consensus 1 i~~~~l~~~~~~~---~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 77 (227)
T cd03260 1 IELRDLNVYYGDK---HALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPDEGEVLLDGKDIYDLDVDVL 77 (227)
T ss_pred CEEEEEEEEcCCc---eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCCeEEEECCEEhhhcchHHH
Confidence 5789999999743 5999999999999999999999999999999999999 999999999999998776 56
Q ss_pred HHhcceEEEccCCCCChhhHHHHHhcCCC-CCC-----CHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHH
Q 000789 1113 WLRQQMGLVSQEPVLFNETIRTNIAYGKQ-GGA-----TEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQ 1186 (1283)
Q Consensus 1113 ~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~-~~~-----sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQ 1186 (1283)
.+|++++|+||++.+|..|++||+.++.. ... .++++.++++..++.+.+...++ +.+|||||||
T Consensus 78 ~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~---------~~~LSgG~~q 148 (227)
T cd03260 78 ELRRRVGMVFQKPNPFPGSIYDNVAYGLRLHGIKLKEELDERVEEALRKAALWDEVKDRLH---------ALGLSGGQQQ 148 (227)
T ss_pred HHHhhEEEEecCchhccccHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCChHHhccCC---------cccCCHHHHH
Confidence 77889999999999998899999986421 111 13456677777777655443321 4589999999
Q ss_pred HHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcCCceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHH
Q 000789 1187 RIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDAL 1264 (1283)
Q Consensus 1187 RlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eL 1264 (1283)
|++|||||+++|++|||||||++||+++.+.+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 149 rv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 227 (227)
T cd03260 149 RLCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKKEYTIVIVTHNMQQAARVADRTAFLLNGRLVEFGPTEQI 227 (227)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhCcEEEEEeccHHHHHHhCCEEEEEeCCEEEEecCcccC
Confidence 999999999999999999999999999999999999998656899999999998875 999999999999999998764
No 169
>COG4178 ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only]
Probab=100.00 E-value=1.2e-39 Score=385.23 Aligned_cols=489 Identities=17% Similarity=0.163 Sum_probs=348.4
Q ss_pred HHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCcc
Q 000789 73 IFGHLINSFGSSDRSHVVHEVSKVAVKFLYLAAGTGIAAFLQVSCWMVTGERQATRIRGLYLKTILRQDIGFFDTETTTG 152 (1283)
Q Consensus 73 ~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~~~~~ll~~~~~~f~~~~~~G 152 (1283)
..+.+.+++...+.. .++..+..+..++.+..++...+.++......+.-.-+-..+.++.+...-.|+.. ..|
T Consensus 69 w~~~~~~aL~~~d~~----~f~~~l~~f~~ia~~~v~~~v~~~~L~~~l~~~wR~wLt~~l~~~wl~~~~~y~l~--~~~ 142 (604)
T COG4178 69 WNGPFYNALARRDLA----AFWQQLQVFAIIAGLLVLLNVAQTWLNQMLRLRWREWLTKDLLDRWLDPRRYYRLA--QAG 142 (604)
T ss_pred hhhHHHHHHHHhhHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHH--hcc
Confidence 345555555433322 22223333444444444444445554433333333334444555555555333332 333
Q ss_pred HH------HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---------------HHHHHHHHHHHHHHHHH
Q 000789 153 EV------IGRMSGDTILIQEAMGEKVGKFIQLMSTFFGGFVVALARG---------------WFLALVLLACLPAIVIA 211 (1283)
Q Consensus 153 ~l------~sr~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---------------~~l~l~~l~~~p~~~~~ 211 (1283)
.+ =+|+..|+..+.+........++.++++++.-.+++...+ ..+..++++.+++..++
T Consensus 143 ~~~~~dNpDQRi~eDi~~~t~~t~~l~~g~l~s~islisF~~iLw~lsg~~~~~~~g~~~~I~g~mv~~~i~Ya~~~s~~ 222 (604)
T COG4178 143 GIGLIDNPDQRIQEDIRNFTETTLDLSFGLLQSVISLISFTGILWSLSGGLAFTIGGFSFGIPGYMVWAVIIYAISASLL 222 (604)
T ss_pred cccCCCChHHhHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHccCcceEeecccccccchHHHHHHHHHHHHHHHH
Confidence 22 3799999999888877777777777776655444443111 12223344445555556
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000789 212 GGSMALIMSKMSSRGQIAYSEAGTVVEQTVSGIRTVSSFTGEKQAIEKYNNKLQVAYRAAVQQGMVSGIGLGVLMLTVIG 291 (1283)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (1283)
..+++|.+.+..-+.++..++.-....-.-++...|-.|+.|+.+.++.++......+...+......-+..+......+
T Consensus 223 ~~~iGr~Li~LN~~~~~~EA~fR~~Lvrv~enaE~IAly~GE~~Er~~l~~~f~~v~~n~~~l~~~~~~l~~~~~gy~~~ 302 (604)
T COG4178 223 THLIGRPLIRLNFERQKLEADFRYSLVRVRENAEAIALYRGEKVERRRLDDRFDAVLGNWRRLVRAQIRLTWFQLGYGWL 302 (604)
T ss_pred HHHHccccccccHHHHHHHHHHHHHHHHHHhhHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhHH
Confidence 66788888888888888888887788888889999999999999998877766665554433333332222223233333
Q ss_pred HHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC--C---CCCCCCCCC
Q 000789 292 TYGLAVWYGSKLIIEKGYNGGTVINVIMAIMTGGMSLGQTSPCLNAFAGGQAAAYKMFETIKRKP--K---IDPYDTSGI 366 (1283)
Q Consensus 292 ~~~~~~~~g~~~v~~~~~t~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~--~---~~~~~~~~~ 366 (1283)
+.++-+..++.....|.++.|.++.....+......++.+...+..+..-++...|+.++-+.-. + ..+......
T Consensus 303 s~v~P~li~ap~~f~g~i~~G~lmqa~~aF~~v~sslswfi~~~~~ia~~rA~~~Rl~~f~~ai~~~~~~~~~~~~~~~~ 382 (604)
T COG4178 303 SVVLPILIAAPRYFSGQITFGGLMQAVGAFGQVHSSLSWFIDNYDAIADWRATLLRLAEFRQALEAAQMDTEKPARTGRR 382 (604)
T ss_pred HHHHHHHhccHhhhcCcChHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhccCcccccCccccc
Confidence 33333344556677899999999988888888888888888889999999999999998764221 1 001010000
Q ss_pred c--ccCccccEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCC
Q 000789 367 T--LEKIEGEIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKL 444 (1283)
Q Consensus 367 ~--~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~ 444 (1283)
. ....+..|+++|++..-|+. ...+++.||++++|+.+-|.||||||||||++.|+|+++--+|+|.+..
T Consensus 383 ~~~~~~~~~~i~~~nl~l~~p~~--~~ll~~l~~~v~~G~~llI~G~SG~GKTsLlRaiaGLWP~g~G~I~~P~------ 454 (604)
T COG4178 383 IDFDDNADHGITLENLSLRTPDG--QTLLSELNFEVRPGERLLITGESGAGKTSLLRALAGLWPWGSGRISMPA------ 454 (604)
T ss_pred ccccccccceeEEeeeeEECCCC--CeeeccceeeeCCCCEEEEECCCCCCHHHHHHHHhccCccCCCceecCC------
Confidence 0 01114689999999998753 3689999999999999999999999999999999999999999997752
Q ss_pred CHHHHhcccEEEccCCCCCcccHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHH
Q 000789 445 QLKWIREKIGLVSQEPILFATSLRENIAYGKEN--ATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRI 522 (1283)
Q Consensus 445 ~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri 522 (1283)
-..+-|+||.|++-.||.||-|+|+... .+++++.+++.++++.++++++.+ .+. -...||+||||||
T Consensus 455 -----~~~~lflpQ~PY~p~GtLre~l~YP~~~~~~~d~~l~~vL~~vgL~~L~~rl~~-~~~----W~~vLS~GEqQRl 524 (604)
T COG4178 455 -----DSALLFLPQRPYLPQGTLREALCYPNAAPDFSDAELVAVLHKVGLGDLAERLDE-EDR----WDRVLSGGEQQRL 524 (604)
T ss_pred -----CCceEEecCCCCCCCccHHHHHhCCCCCCCCChHHHHHHHHHcCcHHHHHHHhc-cCc----HhhhcChhHHHHH
Confidence 1358999999999999999999998754 789999999999999999999843 222 3457999999999
Q ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhccCEEEEEe
Q 000789 523 AIARAILKNPKILLLDEATSALDAESERIVQDALVKIMTSRTTVVVAHRLTTIRNADLIAVVH 585 (1283)
Q Consensus 523 aiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~ 585 (1283)
|+||.|+++|++++|||+|||||+++|..+.+.+++...+.|+|-|.||.......++.+-+.
T Consensus 525 afARilL~kP~~v~LDEATsALDe~~e~~l~q~l~~~lp~~tvISV~Hr~tl~~~h~~~l~l~ 587 (604)
T COG4178 525 AFARLLLHKPKWVFLDEATSALDEETEDRLYQLLKEELPDATVISVGHRPTLWNFHSRQLELL 587 (604)
T ss_pred HHHHHHHcCCCEEEEecchhccChHHHHHHHHHHHhhCCCCEEEEeccchhhHHHHhhheeec
Confidence 999999999999999999999999999999999999889999999999988877666655554
No 170
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5e-43 Score=397.01 Aligned_cols=218 Identities=31% Similarity=0.531 Sum_probs=191.9
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHhcce
Q 000789 1039 AIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQM 1118 (1283)
Q Consensus 1039 ~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i 1118 (1283)
.|+++||+++|+.....++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++.+.+...+|+++
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13650 4 IIEVKNLTFKYKEDQEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAESGQIIIDGDLLTEENVWDIRHKI 83 (279)
T ss_pred eEEEEeEEEEcCCCCcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHHhhc
Confidence 48999999999743224599999999999999999999999999999999999999999999999999888888899999
Q ss_pred EEEccCC--CCChhhHHHHHhcCCC-CCCC----HHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHH
Q 000789 1119 GLVSQEP--VLFNETIRTNIAYGKQ-GGAT----EEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIA 1191 (1283)
Q Consensus 1119 ~~V~Qdp--~Lf~gTIreNl~~g~~-~~~s----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiA 1191 (1283)
+||+|+| .++..|++|||.++.. ...+ ++.+.++++.+++.++....| .+||||||||++||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----------~~LSgGq~qrv~lA 152 (279)
T PRK13650 84 GMVFQNPDNQFVGATVEDDVAFGLENKGIPHEEMKERVNEALELVGMQDFKEREP-----------ARLSGGQKQRVAIA 152 (279)
T ss_pred eEEEcChHHhcccccHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCCHhHhhCCc-----------ccCCHHHHHHHHHH
Confidence 9999998 4667899999987621 1223 245677888888876655443 48999999999999
Q ss_pred HHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchHHhhcCEEEEEeCCEEEEecChHHHHhc
Q 000789 1192 RAVLKNPKILLLDEATSALDAESERVVQDALERVMV--NRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALMKI 1267 (1283)
Q Consensus 1192 RAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~~D~I~vl~~G~Ive~Gt~~eLl~~ 1267 (1283)
|||+++|++|||||||++||+.+.+.+.+.|+++.+ ++|+|+|||+++.+..||+|++|++|++++.|+++++.+.
T Consensus 153 ral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 230 (279)
T PRK13650 153 GAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLDEVALSDRVLVMKNGQVESTSTPRELFSR 230 (279)
T ss_pred HHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHHHHHcC
Confidence 999999999999999999999999999999998753 7899999999999988999999999999999999998764
No 171
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=100.00 E-value=6.8e-43 Score=385.24 Aligned_cols=220 Identities=50% Similarity=0.816 Sum_probs=198.9
Q ss_pred CccccEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHH
Q 000789 370 KIEGEIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWI 449 (1283)
Q Consensus 370 ~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~ 449 (1283)
...+.|+++|++++|+++.+.++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|+++...+....
T Consensus 7 ~~~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~ 86 (226)
T cd03248 7 HLKGIVKFQNVTFAYPTRPDTLVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQPQGGQVLLDGKPISQYEHKYL 86 (226)
T ss_pred CcCceEEEEEEEEEeCCCCCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCcEEEECCCchHHcCHHHH
Confidence 34567999999999975333469999999999999999999999999999999999999999999999999887777777
Q ss_pred hcccEEEccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHh
Q 000789 450 REKIGLVSQEPILFATSLRENIAYGKENATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARAIL 529 (1283)
Q Consensus 450 r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARal~ 529 (1283)
++.++|++|++.+|+.|++||+.++.......++.+.++...++++++.+|.|+++.+.+++.+||||||||++|||||+
T Consensus 87 ~~~i~~~~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~gl~~~~~~~~~~LSgG~~qrv~laral~ 166 (226)
T cd03248 87 HSKVSLVGQEPVLFARSLQDNIAYGLQSCSFECVKEAAQKAHAHSFISELASGYDTEVGEKGSQLSGGQKQRVAIARALI 166 (226)
T ss_pred HhhEEEEecccHHHhhhHHHHhccccCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHh
Confidence 88999999999999999999999876544445555556667788999999999999999999999999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhccCEEEEEeCCEE
Q 000789 530 KNPKILLLDEATSALDAESERIVQDALVKIMTSRTTVVVAHRLTTIRNADLIAVVHQGKI 589 (1283)
Q Consensus 530 ~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i 589 (1283)
++|++|||||||++||+++.+.+.+.|+++.+++|+|++||+++.+..||+|++|++|++
T Consensus 167 ~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~i 226 (226)
T cd03248 167 RNPQVLILDEATSALDAESEQQVQQALYDWPERRTVLVIAHRLSTVERADQILVLDGGRI 226 (226)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEECCHHHHHhCCEEEEecCCcC
Confidence 999999999999999999999999999998777899999999999988999999999974
No 172
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.9e-43 Score=387.05 Aligned_cols=224 Identities=30% Similarity=0.544 Sum_probs=192.4
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHhcce
Q 000789 1039 AIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQM 1118 (1283)
Q Consensus 1039 ~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i 1118 (1283)
.|+++||+++|++ .++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.+||.++...+...+|+.+
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 79 (241)
T PRK14250 3 EIEFKEVSYSSFG---KEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPTEGSILIDGVDIKTIDVIDLRRKI 79 (241)
T ss_pred eEEEEeEEEEeCC---eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcChHHhhhcE
Confidence 4899999999974 3599999999999999999999999999999999999999999999999999888888889999
Q ss_pred EEEccCCCCChhhHHHHHhcCCC-CCCCHHHHHHHHHHhChH-HHHHhCCCCcccccCCCCCCCChhHHHHHHHHHHHcc
Q 000789 1119 GLVSQEPVLFNETIRTNIAYGKQ-GGATEEEIIAATEASNAH-NFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLK 1196 (1283)
Q Consensus 1119 ~~V~Qdp~Lf~gTIreNl~~g~~-~~~sd~ei~~al~~a~l~-~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiARAll~ 1196 (1283)
+|+||++.+|+.|++||+.++.. ....++++.+.++..++. ++ ......+||||||||++||||+++
T Consensus 80 ~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~~LS~G~~qrl~la~al~~ 148 (241)
T PRK14250 80 GMVFQQPHLFEGTVKDNIEYGPMLKGEKNVDVEYYLSIVGLNKEY-----------ATRDVKNLSGGEAQRVSIARTLAN 148 (241)
T ss_pred EEEecCchhchhhHHHHHhcchhhcCcHHHHHHHHHHHcCCCHHH-----------hhCCcccCCHHHHHHHHHHHHHhc
Confidence 99999999999999999987522 112234555566655553 22 223456899999999999999999
Q ss_pred CCCEEEEecccCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHHHhccCchhH
Q 000789 1197 NPKILLLDEATSALDAESERVVQDALERVMV--NRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDALMKITDGAYA 1273 (1283)
Q Consensus 1197 ~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl~~~~g~y~ 1273 (1283)
+|++|||||||++||+++.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++...+...|.
T Consensus 149 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~~~~~ 228 (241)
T PRK14250 149 NPEVLLLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNMEQAKRIGDYTAFLNKGILVEYAKTYDFFTNPQNEVT 228 (241)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHHhCCEEEEEeCCEEEEeCCHHHHhcCCCcHHH
Confidence 9999999999999999999999999998753 7899999999999876 999999999999999999999875444455
Q ss_pred HHH
Q 000789 1274 SLV 1276 (1283)
Q Consensus 1274 ~L~ 1276 (1283)
+.+
T Consensus 229 ~~~ 231 (241)
T PRK14250 229 KLF 231 (241)
T ss_pred HHH
Confidence 544
No 173
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.7e-43 Score=406.72 Aligned_cols=219 Identities=29% Similarity=0.494 Sum_probs=191.8
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHhcce
Q 000789 1039 AIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQM 1118 (1283)
Q Consensus 1039 ~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i 1118 (1283)
.|+++||+++|++ .++|+|+||+|++||.++|+||||||||||+++|+|+++|++|+|.+||.++.+.+. .+++|
T Consensus 6 ~l~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~--~~r~i 80 (351)
T PRK11432 6 FVVLKNITKRFGS---NTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPTEGQIFIDGEDVTHRSI--QQRDI 80 (351)
T ss_pred EEEEEeEEEEECC---eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCH--HHCCE
Confidence 5999999999973 458999999999999999999999999999999999999999999999999987664 46889
Q ss_pred EEEccCCCCCh-hhHHHHHhcCCC-CCCC----HHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHHH
Q 000789 1119 GLVSQEPVLFN-ETIRTNIAYGKQ-GGAT----EEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIAR 1192 (1283)
Q Consensus 1119 ~~V~Qdp~Lf~-gTIreNl~~g~~-~~~s----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiAR 1192 (1283)
+||+|++.+|. .|++||+.|+.. ...+ ++++.++++..++.++..+.| ..||||||||+||||
T Consensus 81 g~vfQ~~~lfp~~tv~eNi~~~l~~~~~~~~~~~~~v~~~l~~~gl~~~~~r~~-----------~~LSgGq~QRVaLAR 149 (351)
T PRK11432 81 CMVFQSYALFPHMSLGENVGYGLKMLGVPKEERKQRVKEALELVDLAGFEDRYV-----------DQISGGQQQRVALAR 149 (351)
T ss_pred EEEeCCcccCCCCCHHHHHHHHHhHcCCCHHHHHHHHHHHHHHcCCchhhcCCh-----------hhCCHHHHHHHHHHH
Confidence 99999999996 599999998632 1122 345677778878766654443 479999999999999
Q ss_pred HHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHHHhccC
Q 000789 1193 AVLKNPKILLLDEATSALDAESERVVQDALERVMV--NRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDALMKITD 1269 (1283)
Q Consensus 1193 All~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl~~~~ 1269 (1283)
||+++|+|||||||||+||+.+...+.+.|+++.+ ++|+|+|||+++.+.. ||+|+||++|+|++.|+++++.+++.
T Consensus 150 aL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~e~~~laD~i~vm~~G~i~~~g~~~~~~~~p~ 229 (351)
T PRK11432 150 ALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQSEAFAVSDTVIVMNKGKIMQIGSPQELYRQPA 229 (351)
T ss_pred HHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCCC
Confidence 99999999999999999999999999999998754 7899999999998855 99999999999999999999998766
Q ss_pred chhH
Q 000789 1270 GAYA 1273 (1283)
Q Consensus 1270 g~y~ 1273 (1283)
..|.
T Consensus 230 ~~~~ 233 (351)
T PRK11432 230 SRFM 233 (351)
T ss_pred chHH
Confidence 5443
No 174
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.9e-43 Score=389.32 Aligned_cols=220 Identities=30% Similarity=0.449 Sum_probs=192.2
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCC---CCcceEEECCccCCCCChHHHh
Q 000789 1039 AIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYD---PDSGHVLLDNIELPKFKLSWLR 1115 (1283)
Q Consensus 1039 ~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~---~~~G~I~idG~di~~~~~~~lR 1115 (1283)
.|+++||+++|++ .++|+|+||+|++||.++|+|+||||||||+++|+|+++ |++|+|.+||.++.+.+...+|
T Consensus 2 ~~~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~ 78 (246)
T PRK14269 2 IAKTTNLNLFYGK---KQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALR 78 (246)
T ss_pred ceeeeeeEEEECC---EeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHh
Confidence 3789999999974 359999999999999999999999999999999999985 6899999999999888888889
Q ss_pred cceEEEccCCCCChhhHHHHHhcCCC-C------CCCHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHH
Q 000789 1116 QQMGLVSQEPVLFNETIRTNIAYGKQ-G------GATEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRI 1188 (1283)
Q Consensus 1116 ~~i~~V~Qdp~Lf~gTIreNl~~g~~-~------~~sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRl 1188 (1283)
+.++|+||+|.+|+.|++||+.++.. . +..++++.++++.+++.+++.. .....+.+||||||||+
T Consensus 79 ~~i~~~~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~G~~qrv 151 (246)
T PRK14269 79 KNVGMVFQQPNVFVKSIYENISYAPKLHGMIKNKDEEEALVVDCLQKVGLFEEVKD-------KLKQNALALSGGQQQRL 151 (246)
T ss_pred hhEEEEecCCccccccHHHHhhhHHhhcCcccChHHHHHHHHHHHHHcCCChhhhH-------HhcCCcccCCHHHHHHH
Confidence 99999999999999999999976521 0 1122346677777777655433 23445678999999999
Q ss_pred HHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcCCceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHHHhc
Q 000789 1189 AIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDALMKI 1267 (1283)
Q Consensus 1189 aiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl~~ 1267 (1283)
+||||++++|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 152 ~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 231 (246)
T PRK14269 152 CIARALAIKPKLLLLDEPTSALDPISSGVIEELLKELSHNLSMIMVTHNMQQGKRVADYTAFFHLGELIEFGESKEFFEN 231 (246)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhCcEEEEEECCEEEEECCHHHHHhC
Confidence 9999999999999999999999999999999999998778999999999998865 999999999999999999999864
Q ss_pred c
Q 000789 1268 T 1268 (1283)
Q Consensus 1268 ~ 1268 (1283)
+
T Consensus 232 ~ 232 (246)
T PRK14269 232 P 232 (246)
T ss_pred C
Confidence 3
No 175
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.5e-43 Score=386.33 Aligned_cols=217 Identities=37% Similarity=0.582 Sum_probs=185.3
Q ss_pred EEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCH---HHHhc
Q 000789 375 IELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQL---KWIRE 451 (1283)
Q Consensus 375 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~---~~~r~ 451 (1283)
|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. ..+|+
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~~ 77 (235)
T cd03261 1 IELRGLTKSFGG---RTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPDSGEVLIDGEDISGLSEAELYRLRR 77 (235)
T ss_pred CeEEEEEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccChhhHHHHhc
Confidence 478999999963 369999999999999999999999999999999999999999999999999877654 56788
Q ss_pred ccEEEccCCCCCcc-cHHHHHhcCCC---CCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHH
Q 000789 452 KIGLVSQEPILFAT-SLRENIAYGKE---NATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARA 527 (1283)
Q Consensus 452 ~i~~v~Q~~~l~~~-ti~~ni~~~~~---~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARa 527 (1283)
.|+||+|++.+|+. |++||+.++.. ..+.++..+. +.+.++.+ |+.........+||||||||++||||
T Consensus 78 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~-----~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~ia~a 150 (235)
T cd03261 78 RMGMLFQSGALFDSLTVFENVAFPLREHTRLSEEEIREI-----VLEKLEAV--GLRGAEDLYPAELSGGMKKRVALARA 150 (235)
T ss_pred ceEEEccCcccCCCCcHHHHHHHHHhhccCCCHHHHHHH-----HHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHHH
Confidence 99999999999986 99999987632 1222222211 12334444 55555566677999999999999999
Q ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHHhcC
Q 000789 528 ILKNPKILLLDEATSALDAESERIVQDALVKIMT--SRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDELIKD 601 (1283)
Q Consensus 528 l~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~ 601 (1283)
|+.+|+||||||||++||+.+.+.+.+.|+++.+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 151 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 227 (235)
T cd03261 151 LALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLDTAFAIADRIAVLYDGKIVAEGTPEELRAS 227 (235)
T ss_pred HhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhcCEEEEEECCeEEEecCHHHHcCC
Confidence 9999999999999999999999999999998753 6899999999999876 999999999999999999998754
No 176
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.7e-43 Score=406.53 Aligned_cols=220 Identities=26% Similarity=0.479 Sum_probs=192.7
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHhcce
Q 000789 1039 AIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQM 1118 (1283)
Q Consensus 1039 ~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i 1118 (1283)
.|+++||+++|++ +..+|+|+||+|++||.++|+||||||||||+++|+|+++|++|+|.+||.++.+.+.. ++.|
T Consensus 3 ~l~i~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~~G~I~~~g~~i~~~~~~--~r~i 78 (356)
T PRK11650 3 GLKLQAVRKSYDG--KTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERITSGEIWIGGRVVNELEPA--DRDI 78 (356)
T ss_pred EEEEEeEEEEeCC--CCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 3899999999942 24699999999999999999999999999999999999999999999999999887754 5799
Q ss_pred EEEccCCCCCh-hhHHHHHhcCCC-CCCC----HHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHHH
Q 000789 1119 GLVSQEPVLFN-ETIRTNIAYGKQ-GGAT----EEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIAR 1192 (1283)
Q Consensus 1119 ~~V~Qdp~Lf~-gTIreNl~~g~~-~~~s----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiAR 1192 (1283)
+||||++.+|. .|++|||.|+.. ...+ ++++.++++..++.++..+.| .+||||||||+||||
T Consensus 79 g~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----------~~LSgGq~QRvalAR 147 (356)
T PRK11650 79 AMVFQNYALYPHMSVRENMAYGLKIRGMPKAEIEERVAEAARILELEPLLDRKP-----------RELSGGQRQRVAMGR 147 (356)
T ss_pred EEEeCCccccCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhHhhCCh-----------hhCCHHHHHHHHHHH
Confidence 99999999995 699999998632 1123 245677888888887766655 389999999999999
Q ss_pred HHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHHHhccC
Q 000789 1193 AVLKNPKILLLDEATSALDAESERVVQDALERVMV--NRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDALMKITD 1269 (1283)
Q Consensus 1193 All~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl~~~~ 1269 (1283)
||+++|++||||||||+||+.+...+.+.|+++.+ +.|+|+|||+++.+.. ||+|++|++|++++.|+++++.+++.
T Consensus 148 AL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~l~D~i~vl~~G~i~~~g~~~~~~~~p~ 227 (356)
T PRK11650 148 AIVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQVEAMTLADRVVVMNGGVAEQIGTPVEVYEKPA 227 (356)
T ss_pred HHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEECCHHHHHhCCc
Confidence 99999999999999999999999999999998754 6899999999998765 99999999999999999999988765
Q ss_pred chhH
Q 000789 1270 GAYA 1273 (1283)
Q Consensus 1270 g~y~ 1273 (1283)
..|.
T Consensus 228 ~~~~ 231 (356)
T PRK11650 228 STFV 231 (356)
T ss_pred cHHH
Confidence 5443
No 177
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.6e-43 Score=405.04 Aligned_cols=218 Identities=30% Similarity=0.499 Sum_probs=187.1
Q ss_pred cEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHHhccc
Q 000789 374 EIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWIREKI 453 (1283)
Q Consensus 374 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 453 (1283)
.|+++|++++|++ +.++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.+||+++.+.++. +++|
T Consensus 3 ~l~i~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~~G~I~~~g~~i~~~~~~--~r~i 78 (356)
T PRK11650 3 GLKLQAVRKSYDG--KTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERITSGEIWIGGRVVNELEPA--DRDI 78 (356)
T ss_pred EEEEEeEEEEeCC--CCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 4899999999942 24699999999999999999999999999999999999999999999999999887654 4789
Q ss_pred EEEccCCCCCcc-cHHHHHhcCCCC--CCH----HHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHH
Q 000789 454 GLVSQEPILFAT-SLRENIAYGKEN--ATD----QEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIAR 526 (1283)
Q Consensus 454 ~~v~Q~~~l~~~-ti~~ni~~~~~~--~~~----~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiAR 526 (1283)
|||+|++.+|+. ||+|||.|+... .+. +++.++++..+ ++......+.+||||||||++|||
T Consensus 79 g~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~~g-----------L~~~~~~~~~~LSgGq~QRvalAR 147 (356)
T PRK11650 79 AMVFQNYALYPHMSVRENMAYGLKIRGMPKAEIEERVAEAARILE-----------LEPLLDRKPRELSGGQRQRVAMGR 147 (356)
T ss_pred EEEeCCccccCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcC-----------ChhHhhCChhhCCHHHHHHHHHHH
Confidence 999999999964 999999987531 222 22344444444 444445555799999999999999
Q ss_pred HHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHHhcCCC
Q 000789 527 AILKNPKILLLDEATSALDAESERIVQDALVKIMT--SRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDELIKDPE 603 (1283)
Q Consensus 527 al~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~~~ 603 (1283)
||+++|++||||||||+||+.+++.+.+.|+++.+ +.|+|+|||+++.+.. ||+|++|++|++++.|+++++..++.
T Consensus 148 AL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~l~D~i~vl~~G~i~~~g~~~~~~~~p~ 227 (356)
T PRK11650 148 AIVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQVEAMTLADRVVVMNGGVAEQIGTPVEVYEKPA 227 (356)
T ss_pred HHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEECCHHHHHhCCc
Confidence 99999999999999999999999999999998754 6899999999998865 99999999999999999999988755
Q ss_pred Chh
Q 000789 604 GPY 606 (1283)
Q Consensus 604 ~~~ 606 (1283)
..|
T Consensus 228 ~~~ 230 (356)
T PRK11650 228 STF 230 (356)
T ss_pred cHH
Confidence 444
No 178
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.4e-43 Score=404.66 Aligned_cols=222 Identities=34% Similarity=0.525 Sum_probs=187.8
Q ss_pred EEEEEEEEECCCCC-CcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHH---Hh
Q 000789 1040 IELRCVSFKYPTRP-DVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSW---LR 1115 (1283)
Q Consensus 1040 I~~~nVsf~Y~~~~-~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~---lR 1115 (1283)
|+++||+++|+... +.++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++.+++... +|
T Consensus 2 i~i~~l~~~y~~~~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~ 81 (343)
T PRK11153 2 IELKNISKVFPQGGRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPTSGRVLVDGQDLTALSEKELRKAR 81 (343)
T ss_pred EEEEeEEEEeCCCCCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 78999999997311 346999999999999999999999999999999999999999999999999998877544 47
Q ss_pred cceEEEccCCCCCh-hhHHHHHhcCCC-CCCCH----HHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHH
Q 000789 1116 QQMGLVSQEPVLFN-ETIRTNIAYGKQ-GGATE----EEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIA 1189 (1283)
Q Consensus 1116 ~~i~~V~Qdp~Lf~-gTIreNl~~g~~-~~~sd----~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRla 1189 (1283)
++|+||||++.+|. .|++||+.++.. ...+. +++.+.++..++.++.. ....+||||||||++
T Consensus 82 ~~ig~v~q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~-----------~~~~~LSgGq~qRv~ 150 (343)
T PRK11153 82 RQIGMIFQHFNLLSSRTVFDNVALPLELAGTPKAEIKARVTELLELVGLSDKAD-----------RYPAQLSGGQKQRVA 150 (343)
T ss_pred cCEEEEeCCCccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhh-----------CChhhCCHHHHHHHH
Confidence 89999999999886 799999986421 12232 33455555555544433 334589999999999
Q ss_pred HHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHHHh
Q 000789 1190 IARAVLKNPKILLLDEATSALDAESERVVQDALERVMV--NRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDALMK 1266 (1283)
Q Consensus 1190 iARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl~ 1266 (1283)
|||||+++|+|||||||||+||+.+...+++.|+++.+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 151 lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~~i~~~~d~v~~l~~G~i~~~g~~~~~~~ 230 (343)
T PRK11153 151 IARALASNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMDVVKRICDRVAVIDAGRLVEQGTVSEVFS 230 (343)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 99999999999999999999999999999999998753 7899999999999876 99999999999999999999987
Q ss_pred ccCchh
Q 000789 1267 ITDGAY 1272 (1283)
Q Consensus 1267 ~~~g~y 1272 (1283)
.+...+
T Consensus 231 ~~~~~~ 236 (343)
T PRK11153 231 HPKHPL 236 (343)
T ss_pred CCCcHH
Confidence 544333
No 179
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-42 Score=402.95 Aligned_cols=217 Identities=32% Similarity=0.569 Sum_probs=187.5
Q ss_pred cEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHHhccc
Q 000789 374 EIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWIREKI 453 (1283)
Q Consensus 374 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 453 (1283)
.|+++||+++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.+||.++.+.++. +++|
T Consensus 6 ~l~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~--~r~i 80 (351)
T PRK11432 6 FVVLKNITKRFGS---NTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPTEGQIFIDGEDVTHRSIQ--QRDI 80 (351)
T ss_pred EEEEEeEEEEECC---eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 5999999999963 4589999999999999999999999999999999999999999999999999876643 5789
Q ss_pred EEEccCCCCCcc-cHHHHHhcCCCC--CCHH----HHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHH
Q 000789 454 GLVSQEPILFAT-SLRENIAYGKEN--ATDQ----EIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIAR 526 (1283)
Q Consensus 454 ~~v~Q~~~l~~~-ti~~ni~~~~~~--~~~~----~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiAR 526 (1283)
|||+|++.+|+. ||+|||.|+... .+.+ ++.++++.. |+.......+.+||||||||++|||
T Consensus 81 g~vfQ~~~lfp~~tv~eNi~~~l~~~~~~~~~~~~~v~~~l~~~-----------gl~~~~~r~~~~LSgGq~QRVaLAR 149 (351)
T PRK11432 81 CMVFQSYALFPHMSLGENVGYGLKMLGVPKEERKQRVKEALELV-----------DLAGFEDRYVDQISGGQQQRVALAR 149 (351)
T ss_pred EEEeCCcccCCCCCHHHHHHHHHhHcCCCHHHHHHHHHHHHHHc-----------CCchhhcCChhhCCHHHHHHHHHHH
Confidence 999999999975 999999997431 2222 333344443 4444455566799999999999999
Q ss_pred HHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHHhcCCC
Q 000789 527 AILKNPKILLLDEATSALDAESERIVQDALVKIMT--SRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDELIKDPE 603 (1283)
Q Consensus 527 al~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~~~ 603 (1283)
||+.+|++||||||||+||+.+...+.+.|+++.+ +.|+|+|||+++.+.. ||+|++|++|+|++.|+++++..++.
T Consensus 150 aL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~e~~~laD~i~vm~~G~i~~~g~~~~~~~~p~ 229 (351)
T PRK11432 150 ALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQSEAFAVSDTVIVMNKGKIMQIGSPQELYRQPA 229 (351)
T ss_pred HHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCCC
Confidence 99999999999999999999999999999998854 6899999999999865 99999999999999999999988765
Q ss_pred Chh
Q 000789 604 GPY 606 (1283)
Q Consensus 604 ~~~ 606 (1283)
..|
T Consensus 230 ~~~ 232 (351)
T PRK11432 230 SRF 232 (351)
T ss_pred chH
Confidence 444
No 180
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-42 Score=388.14 Aligned_cols=225 Identities=30% Similarity=0.455 Sum_probs=191.5
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCC-----CcceEEECCccCCC--CCh
Q 000789 1039 AIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDP-----DSGHVLLDNIELPK--FKL 1111 (1283)
Q Consensus 1039 ~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~-----~~G~I~idG~di~~--~~~ 1111 (1283)
.|+++|++++|++ .++|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.+||.++.. .+.
T Consensus 7 ~l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 83 (254)
T PRK14273 7 IIETENLNLFYTD---FKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDI 83 (254)
T ss_pred eEEEeeeEEEeCC---ceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccH
Confidence 5999999999974 3599999999999999999999999999999999999997 48999999998853 344
Q ss_pred HHHhcceEEEccCCCCChhhHHHHHhcCCCC-C-C----CHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHH
Q 000789 1112 SWLRQQMGLVSQEPVLFNETIRTNIAYGKQG-G-A----TEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQK 1185 (1283)
Q Consensus 1112 ~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~~-~-~----sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQr 1185 (1283)
..+|++++||||++.+|+.|++||+.++... . . .++.+.++++.+++.+.+ ++.+++ ...+||||||
T Consensus 84 ~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l---~~~~~~----~~~~LSgG~~ 156 (254)
T PRK14273 84 LELRRKIGMVFQTPNPFLMSIYDNISYGPKIHGTKDKKKLDEIVEQSLKKSALWNEV---KDKLNT----NALSLSGGQQ 156 (254)
T ss_pred HHHhhceEEEeeccccccCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCchhh---HHHHhC----CcccCCHHHH
Confidence 5678999999999999999999999875211 1 1 134566677777764433 233444 3458999999
Q ss_pred HHHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcCCceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHH
Q 000789 1186 QRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDAL 1264 (1283)
Q Consensus 1186 QRlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eL 1264 (1283)
||++|||||+++|++|||||||++||+.+...+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 157 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 236 (254)
T PRK14273 157 QRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLKESYTIIIVTHNMQQAGRISDRTAFFLNGCIEEESSTDEL 236 (254)
T ss_pred HHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998777899999999999866 999999999999999999999
Q ss_pred HhccCchhH
Q 000789 1265 MKITDGAYA 1273 (1283)
Q Consensus 1265 l~~~~g~y~ 1273 (1283)
.+.+...|.
T Consensus 237 ~~~~~~~~~ 245 (254)
T PRK14273 237 FFNPKNTKT 245 (254)
T ss_pred HhCCCChHH
Confidence 875455443
No 181
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=1.2e-42 Score=403.30 Aligned_cols=218 Identities=28% Similarity=0.461 Sum_probs=189.2
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHhcce
Q 000789 1039 AIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQM 1118 (1283)
Q Consensus 1039 ~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i 1118 (1283)
.|+++||+++|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||.++.+.+.. ++.+
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~~G~I~i~g~~~~~~~~~--~r~i 78 (353)
T TIGR03265 4 YLSIDNIRKRFGA---FTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQTAGTIYQGGRDITRLPPQ--KRDY 78 (353)
T ss_pred EEEEEEEEEEeCC---eEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 4899999999974 3589999999999999999999999999999999999999999999999999877653 6789
Q ss_pred EEEccCCCCCh-hhHHHHHhcCCC-CCCC----HHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHHH
Q 000789 1119 GLVSQEPVLFN-ETIRTNIAYGKQ-GGAT----EEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIAR 1192 (1283)
Q Consensus 1119 ~~V~Qdp~Lf~-gTIreNl~~g~~-~~~s----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiAR 1192 (1283)
+||||++.+|. .|++||+.|+.. ...+ ++++.++++..++.++.. ....+||||||||+||||
T Consensus 79 g~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~l~L~~~~~-----------~~~~~LSgGq~QRvaLAR 147 (353)
T TIGR03265 79 GIVFQSYALFPNLTVADNIAYGLKNRGMGRAEVAERVAELLDLVGLPGSER-----------KYPGQLSGGQQQRVALAR 147 (353)
T ss_pred EEEeCCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCchhh-----------CChhhCCHHHHHHHHHHH
Confidence 99999999995 699999998632 1122 234556666666655443 344589999999999999
Q ss_pred HHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHHHhccC
Q 000789 1193 AVLKNPKILLLDEATSALDAESERVVQDALERVMV--NRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDALMKITD 1269 (1283)
Q Consensus 1193 All~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl~~~~ 1269 (1283)
||+++|++||||||||+||+.+...+.+.|+++.+ +.|+|+|||+++.+.. ||+|++|++|++++.|+|+++.+++.
T Consensus 148 aL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~ea~~l~d~i~vl~~G~i~~~g~~~~~~~~p~ 227 (353)
T TIGR03265 148 ALATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQEEALSMADRIVVMNHGVIEQVGTPQEIYRHPA 227 (353)
T ss_pred HHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCCC
Confidence 99999999999999999999999999999998754 7899999999998765 99999999999999999999998766
Q ss_pred chh
Q 000789 1270 GAY 1272 (1283)
Q Consensus 1270 g~y 1272 (1283)
..|
T Consensus 228 ~~~ 230 (353)
T TIGR03265 228 TPF 230 (353)
T ss_pred CHH
Confidence 555
No 182
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-42 Score=391.57 Aligned_cols=214 Identities=31% Similarity=0.553 Sum_probs=188.8
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHhcce
Q 000789 1039 AIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQM 1118 (1283)
Q Consensus 1039 ~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i 1118 (1283)
-|+++||+++|+.. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+...+|+++
T Consensus 4 ~l~~~~l~~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i 81 (274)
T PRK13647 4 IIEVEDLHFRYKDG--TKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQRGRVKVMGREVNAENEKWVRSKV 81 (274)
T ss_pred eEEEEEEEEEeCCC--CeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCceEEEECCEECCCCCHHHHHhhE
Confidence 48999999999732 3599999999999999999999999999999999999999999999999999888888889999
Q ss_pred EEEccCC--CCChhhHHHHHhcCCC-CCCC----HHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHH
Q 000789 1119 GLVSQEP--VLFNETIRTNIAYGKQ-GGAT----EEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIA 1191 (1283)
Q Consensus 1119 ~~V~Qdp--~Lf~gTIreNl~~g~~-~~~s----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiA 1191 (1283)
+||||+| .+|..|++||+.++.. ...+ ++++.++++.+++.++..+.| ..||||||||++||
T Consensus 82 ~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----------~~LSgG~~qrv~la 150 (274)
T PRK13647 82 GLVFQDPDDQVFSSTVWDDVAFGPVNMGLDKDEVERRVEEALKAVRMWDFRDKPP-----------YHLSYGQKKRVAIA 150 (274)
T ss_pred EEEecChhhhhccCcHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHhcCCh-----------hhCCHHHHHHHHHH
Confidence 9999998 6888999999987521 1122 245677788888876655544 37999999999999
Q ss_pred HHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHHH
Q 000789 1192 RAVLKNPKILLLDEATSALDAESERVVQDALERVM-VNRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDALM 1265 (1283)
Q Consensus 1192 RAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl 1265 (1283)
|||+++|++|||||||++||+.+...+.+.|+++. +++|+|+|||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 151 raL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 226 (274)
T PRK13647 151 GVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVDLAAEWADQVIVLKEGRVLAEGDKSLLT 226 (274)
T ss_pred HHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHhc
Confidence 99999999999999999999999999999999875 47899999999999854 9999999999999999987653
No 183
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=8.1e-43 Score=403.39 Aligned_cols=208 Identities=31% Similarity=0.507 Sum_probs=182.3
Q ss_pred cccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHH----hcceEEEccCCCCCh-
Q 000789 1055 VQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWL----RQQMGLVSQEPVLFN- 1129 (1283)
Q Consensus 1055 ~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~l----R~~i~~V~Qdp~Lf~- 1129 (1283)
..+|+|+||+|++||.++|+|+||||||||+++|.|+++|++|+|.+||.|+.+.+...+ |++++||||++.+|+
T Consensus 6 ~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l~~~ 85 (363)
T TIGR01186 6 KKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFALFPH 85 (363)
T ss_pred ceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcCCCC
Confidence 458999999999999999999999999999999999999999999999999999988887 789999999999997
Q ss_pred hhHHHHHhcCCC-CCCC----HHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHHHHHccCCCEEEEe
Q 000789 1130 ETIRTNIAYGKQ-GGAT----EEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLD 1204 (1283)
Q Consensus 1130 gTIreNl~~g~~-~~~s----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiARAll~~p~ILiLD 1204 (1283)
.|++||+.++.. ...+ .+++.++++.+++.++..+.| .+||||||||++|||||+++|+|||||
T Consensus 86 ~TV~eNi~~~~~~~~~~~~~~~~~~~~~l~~vgL~~~~~~~p-----------~~LSGGq~QRV~lARAL~~~p~iLLlD 154 (363)
T TIGR01186 86 MTILQNTSLGPELLGWPEQERKEKALELLKLVGLEEYEHRYP-----------DELSGGMQQRVGLARALAAEPDILLMD 154 (363)
T ss_pred CCHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCchhhhCCh-----------hhCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 599999987521 1122 345677777777766655444 489999999999999999999999999
Q ss_pred cccCCCCHHHHHHHHHHHHHHc--CCceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHHHhccCchhH
Q 000789 1205 EATSALDAESERVVQDALERVM--VNRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDALMKITDGAYA 1273 (1283)
Q Consensus 1205 EaTSaLD~~te~~I~~~L~~~~--~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl~~~~g~y~ 1273 (1283)
||||+||+.+.+.+++.+.++. .++|+|+|||+++.+.. ||+|++|++|++++.|+++|+++++...|.
T Consensus 155 EP~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~ea~~~~drI~vl~~G~iv~~g~~~ei~~~p~~~~~ 226 (363)
T TIGR01186 155 EAFSALDPLIRDSMQDELKKLQATLQKTIVFITHDLDEAIRIGDRIVIMKAGEIVQVGTPDEILRNPANEYV 226 (363)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEeeCCHHHHHhCcccHHH
Confidence 9999999999999999998874 37899999999998654 999999999999999999999876544443
No 184
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=1.6e-42 Score=402.33 Aligned_cols=221 Identities=33% Similarity=0.534 Sum_probs=191.4
Q ss_pred cEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHHhccc
Q 000789 374 EIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWIREKI 453 (1283)
Q Consensus 374 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 453 (1283)
.|+++||+++|++ ..+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.+||+++.+.++. ++.|
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~~G~I~i~g~~~~~~~~~--~r~i 78 (353)
T TIGR03265 4 YLSIDNIRKRFGA---FTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQTAGTIYQGGRDITRLPPQ--KRDY 78 (353)
T ss_pred EEEEEEEEEEeCC---eEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 4899999999963 3589999999999999999999999999999999999999999999999999877654 5789
Q ss_pred EEEccCCCCCc-ccHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHhc
Q 000789 454 GLVSQEPILFA-TSLRENIAYGKEN--ATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARAILK 530 (1283)
Q Consensus 454 ~~v~Q~~~l~~-~ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARal~~ 530 (1283)
|||+|++.+|+ .||+|||.|+... .+..+.. ..+++.++.+ |++......+.+||||||||++|||||+.
T Consensus 79 g~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~-----~~~~~~l~~l--~L~~~~~~~~~~LSgGq~QRvaLARaL~~ 151 (353)
T TIGR03265 79 GIVFQSYALFPNLTVADNIAYGLKNRGMGRAEVA-----ERVAELLDLV--GLPGSERKYPGQLSGGQQQRVALARALAT 151 (353)
T ss_pred EEEeCCcccCCCCcHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHc--CCCchhhCChhhCCHHHHHHHHHHHHHhc
Confidence 99999999996 5999999997432 1222221 1234455555 67767777888999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHHhcCCCChh
Q 000789 531 NPKILLLDEATSALDAESERIVQDALVKIMT--SRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDELIKDPEGPY 606 (1283)
Q Consensus 531 ~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~~~~~~ 606 (1283)
+|++||||||||+||+.+.+.+.+.|+++.+ +.|+|+|||+++.+.. ||+|++|++|++++.|+++++..++...|
T Consensus 152 ~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~ea~~l~d~i~vl~~G~i~~~g~~~~~~~~p~~~~ 230 (353)
T TIGR03265 152 SPGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQEEALSMADRIVVMNHGVIEQVGTPQEIYRHPATPF 230 (353)
T ss_pred CCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCCCCHH
Confidence 9999999999999999999999999998754 6899999999999865 99999999999999999999998755444
No 185
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-42 Score=393.62 Aligned_cols=218 Identities=34% Similarity=0.560 Sum_probs=185.3
Q ss_pred EEEEEEEEECCCCC--CcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCC--hHHHh
Q 000789 1040 IELRCVSFKYPTRP--DVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFK--LSWLR 1115 (1283)
Q Consensus 1040 I~~~nVsf~Y~~~~--~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~--~~~lR 1115 (1283)
|+++||+++|+... ..++|+||||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++.+.+ ...+|
T Consensus 3 l~~~~l~~~y~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 82 (287)
T PRK13637 3 IKIENLTHIYMEGTPFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPTSGKIIIDGVDITDKKVKLSDIR 82 (287)
T ss_pred EEEEEEEEECCCCCccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCccEEEECCEECCCcCccHHHHh
Confidence 88999999997421 136999999999999999999999999999999999999999999999999997754 45788
Q ss_pred cceEEEccCC--CCChhhHHHHHhcCCC-CCCCHH----HHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHH
Q 000789 1116 QQMGLVSQEP--VLFNETIRTNIAYGKQ-GGATEE----EIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRI 1188 (1283)
Q Consensus 1116 ~~i~~V~Qdp--~Lf~gTIreNl~~g~~-~~~sd~----ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRl 1188 (1283)
++|+||||+| .+|+.|++||+.++.. .+.+.+ ++.++++.+++. +.+........||||||||+
T Consensus 83 ~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~---------~~~~~~~~~~~LSgGq~qrv 153 (287)
T PRK13637 83 KKVGLVFQYPEYQLFEETIEKDIAFGPINLGLSEEEIENRVKRAMNIVGLD---------YEDYKDKSPFELSGGQKRRV 153 (287)
T ss_pred hceEEEecCchhccccccHHHHHHhHHHHCCCCHHHHHHHHHHHHHHcCCC---------chhhccCCcccCCHHHHHHH
Confidence 9999999998 5789999999987521 123433 345556555553 00223344568999999999
Q ss_pred HHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchHHh-hcCEEEEEeCCEEEEecChHHHH
Q 000789 1189 AIARAVLKNPKILLLDEATSALDAESERVVQDALERVMV--NRTTVVVAHRLTTIK-NADIIAVVKNGVIAEQGSHDALM 1265 (1283)
Q Consensus 1189 aiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~-~~D~I~vl~~G~Ive~Gt~~eLl 1265 (1283)
+|||||+.+|++|||||||++||+.+...+.+.|+++.+ ++|+|+|||+++.+. .||||++|++|++++.|++++++
T Consensus 154 ~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~drv~~l~~G~i~~~g~~~~~~ 233 (287)
T PRK13637 154 AIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSMEDVAKLADRIIVMNKGKCELQGTPREVF 233 (287)
T ss_pred HHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHH
Confidence 999999999999999999999999999999999998753 789999999999885 49999999999999999999987
Q ss_pred h
Q 000789 1266 K 1266 (1283)
Q Consensus 1266 ~ 1266 (1283)
+
T Consensus 234 ~ 234 (287)
T PRK13637 234 K 234 (287)
T ss_pred h
Confidence 5
No 186
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-42 Score=392.16 Aligned_cols=217 Identities=33% Similarity=0.559 Sum_probs=186.9
Q ss_pred cEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHHhccc
Q 000789 374 EIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWIREKI 453 (1283)
Q Consensus 374 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 453 (1283)
.|+++||+++|++....++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+...+|+++
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13650 4 IIEVKNLTFKYKEDQEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAESGQIIIDGDLLTEENVWDIRHKI 83 (279)
T ss_pred eEEEEeEEEEcCCCCcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHHhhc
Confidence 48999999999743224599999999999999999999999999999999999999999999999999887777888999
Q ss_pred EEEccCCC--CCcccHHHHHhcCCCC--CCHH----HHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHH
Q 000789 454 GLVSQEPI--LFATSLRENIAYGKEN--ATDQ----EIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIA 525 (1283)
Q Consensus 454 ~~v~Q~~~--l~~~ti~~ni~~~~~~--~~~~----~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiA 525 (1283)
+||+|+|. ++..||+|||.++... .+.+ ++.++++.. |++........+||||||||++||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~-----------gL~~~~~~~~~~LSgGq~qrv~lA 152 (279)
T PRK13650 84 GMVFQNPDNQFVGATVEDDVAFGLENKGIPHEEMKERVNEALELV-----------GMQDFKEREPARLSGGQKQRVAIA 152 (279)
T ss_pred eEEEcChHHhcccccHHHHHHhhHHhCCCCHHHHHHHHHHHHHHC-----------CCHhHhhCCcccCCHHHHHHHHHH
Confidence 99999983 5567999999987432 2222 233344444 444444555679999999999999
Q ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhccCEEEEEeCCEEeEecChhHHhcC
Q 000789 526 RAILKNPKILLLDEATSALDAESERIVQDALVKIMT--SRTTVVVAHRLTTIRNADLIAVVHQGKIVEKGTHDELIKD 601 (1283)
Q Consensus 526 Ral~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~~~l~~~ 601 (1283)
|||+.+|++|||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+..||+|++|++|++++.|+++++...
T Consensus 153 ral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 230 (279)
T PRK13650 153 GAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLDEVALSDRVLVMKNGQVESTSTPRELFSR 230 (279)
T ss_pred HHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHHHHHcC
Confidence 999999999999999999999999999999998864 7899999999999877999999999999999999988764
No 187
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=1.1e-42 Score=383.74 Aligned_cols=210 Identities=38% Similarity=0.622 Sum_probs=179.0
Q ss_pred EEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCC-----CCCCceEEECCcccCCCC--HH
Q 000789 375 IELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFY-----DPDAGEVLIDGIDIKKLQ--LK 447 (1283)
Q Consensus 375 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~-----~~~~G~i~~~g~~~~~~~--~~ 447 (1283)
|+++||+++|++ .++|+|+||+|++||+++|+||||||||||+++|+|++ +|++|+|.++|+++...+ ..
T Consensus 1 i~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 77 (227)
T cd03260 1 IELRDLNVYYGD---KHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPDEGEVLLDGKDIYDLDVDVL 77 (227)
T ss_pred CEEEEEEEEcCC---ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCCeEEEECCEEhhhcchHHH
Confidence 578999999964 36999999999999999999999999999999999999 999999999999987766 55
Q ss_pred HHhcccEEEccCCCCCcccHHHHHhcCCCCC---C----HHHHHHHHHHhcHHHHHHhCCCCccccccCC--CCCCChHH
Q 000789 448 WIREKIGLVSQEPILFATSLRENIAYGKENA---T----DQEIRTAIELANAAKFIDKLPKGLDTMAGEH--GTQLSGGQ 518 (1283)
Q Consensus 448 ~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~---~----~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~--g~~LSgGq 518 (1283)
.++++++|++|++.+|..|++||+.++.... . ++++.++++.. |++...... +.+|||||
T Consensus 78 ~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~-----------~l~~~~~~~~~~~~LSgG~ 146 (227)
T cd03260 78 ELRRRVGMVFQKPNPFPGSIYDNVAYGLRLHGIKLKEELDERVEEALRKA-----------ALWDEVKDRLHALGLSGGQ 146 (227)
T ss_pred HHHhhEEEEecCchhccccHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHc-----------CCChHHhccCCcccCCHHH
Confidence 6788999999999999789999998753211 1 12233333333 444333333 57999999
Q ss_pred HHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhH
Q 000789 519 KQRIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMTSRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDE 597 (1283)
Q Consensus 519 kqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~ 597 (1283)
|||++|||||+++|++|||||||++||+.+++.+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|++++
T Consensus 147 ~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 226 (227)
T cd03260 147 QQRLCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKKEYTIVIVTHNMQQAARVADRTAFLLNGRLVEFGPTEQ 226 (227)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhCcEEEEEeccHHHHHHhCCEEEEEeCCEEEEecCccc
Confidence 99999999999999999999999999999999999999998655899999999999875 99999999999999998765
Q ss_pred H
Q 000789 598 L 598 (1283)
Q Consensus 598 l 598 (1283)
+
T Consensus 227 ~ 227 (227)
T cd03260 227 I 227 (227)
T ss_pred C
Confidence 3
No 188
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=1.1e-42 Score=402.20 Aligned_cols=212 Identities=35% Similarity=0.561 Sum_probs=181.2
Q ss_pred CcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHH----hcccEEEccCCCCCcc
Q 000789 390 VQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWI----REKIGLVSQEPILFAT 465 (1283)
Q Consensus 390 ~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~----r~~i~~v~Q~~~l~~~ 465 (1283)
+.+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|++||+++...+...+ |++|+||+|++++|+.
T Consensus 6 ~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l~~~ 85 (363)
T TIGR01186 6 KKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFALFPH 85 (363)
T ss_pred ceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcCCCC
Confidence 458999999999999999999999999999999999999999999999999999888777 7899999999999975
Q ss_pred -cHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCC
Q 000789 466 -SLRENIAYGKEN--ATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARAILKNPKILLLDEATS 542 (1283)
Q Consensus 466 -ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARal~~~~~illlDE~ts 542 (1283)
||+|||.++.+. .+.++..+ .+.+.++.+ |++...++.+.+|||||||||+|||||+.+|+|||||||||
T Consensus 86 ~TV~eNi~~~~~~~~~~~~~~~~-----~~~~~l~~v--gL~~~~~~~p~~LSGGq~QRV~lARAL~~~p~iLLlDEP~s 158 (363)
T TIGR01186 86 MTILQNTSLGPELLGWPEQERKE-----KALELLKLV--GLEEYEHRYPDELSGGMQQRVGLARALAAEPDILLMDEAFS 158 (363)
T ss_pred CCHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHhc--CCchhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcc
Confidence 999999986432 12222111 112333333 55555666777999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHHhcCCCChhHH
Q 000789 543 ALDAESERIVQDALVKIMT--SRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDELIKDPEGPYTQ 608 (1283)
Q Consensus 543 ~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~~~~~~~~ 608 (1283)
+||+.+.+.+++.+.++.+ ++|+|+|||+++.+.. ||+|++|++|++++.|++++++.++...|..
T Consensus 159 aLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~ea~~~~drI~vl~~G~iv~~g~~~ei~~~p~~~~~~ 227 (363)
T TIGR01186 159 ALDPLIRDSMQDELKKLQATLQKTIVFITHDLDEAIRIGDRIVIMKAGEIVQVGTPDEILRNPANEYVE 227 (363)
T ss_pred cCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEeeCCHHHHHhCcccHHHH
Confidence 9999999999999998753 7899999999998755 9999999999999999999998875555543
No 189
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1). NFT1 belongs to the MRP (mulrtidrug resisitance-associated protein) family of ABC transporters. Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=4.1e-42 Score=373.56 Aligned_cols=203 Identities=34% Similarity=0.608 Sum_probs=182.8
Q ss_pred ccEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHhcc
Q 000789 1038 GAIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQ 1117 (1283)
Q Consensus 1038 g~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~ 1117 (1283)
+.|+++|++++|+.. ..++++|+||+|++||.+||+|+||||||||+++|+|+++|++|+|.+||.++.+.+...+|++
T Consensus 5 ~~l~~~~l~~~~~~~-~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~ 83 (207)
T cd03369 5 GEIEVENLSVRYAPD-LPPVLKNVSFKVKAGEKIGIVGRTGAGKSTLILALFRFLEAEEGKIEIDGIDISTIPLEDLRSS 83 (207)
T ss_pred CeEEEEEEEEEeCCC-CcccccCceEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEhHHCCHHHHHhh
Confidence 569999999999743 2369999999999999999999999999999999999999999999999999988888888999
Q ss_pred eEEEccCCCCChhhHHHHHhcCCCCCCCHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHHHHHccC
Q 000789 1118 MGLVSQEPVLFNETIRTNIAYGKQGGATEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKN 1197 (1283)
Q Consensus 1118 i~~V~Qdp~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiARAll~~ 1197 (1283)
++||||+|.+|++|++||+.+.. ..+++++.++++ +......|||||+||++||||++++
T Consensus 84 i~~v~q~~~~~~~tv~~~l~~~~--~~~~~~~~~~l~------------------~~~~~~~LS~G~~qrv~laral~~~ 143 (207)
T cd03369 84 LTIIPQDPTLFSGTIRSNLDPFD--EYSDEEIYGALR------------------VSEGGLNLSQGQRQLLCLARALLKR 143 (207)
T ss_pred EEEEecCCcccCccHHHHhcccC--CCCHHHHHHHhh------------------ccCCCCcCCHHHHHHHHHHHHHhhC
Confidence 99999999999999999997642 345555554443 2345678999999999999999999
Q ss_pred CCEEEEecccCCCCHHHHHHHHHHHHHHcCCceEEEEecCchHHhhcCEEEEEeCCEEEEecCh
Q 000789 1198 PKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSH 1261 (1283)
Q Consensus 1198 p~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~~D~I~vl~~G~Ive~Gt~ 1261 (1283)
|++|||||||++||+++...+.+.|++..+++|+|++||+++.+..||++++|++|++++.|++
T Consensus 144 p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~th~~~~~~~~d~v~~l~~g~i~~~g~~ 207 (207)
T cd03369 144 PRVLVLDEATASIDYATDALIQKTIREEFTNSTILTIAHRLRTIIDYDKILVMDAGEVKEYDHP 207 (207)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEecCCC
Confidence 9999999999999999999999999998778999999999999988999999999999998874
No 190
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=2.7e-42 Score=385.42 Aligned_cols=223 Identities=30% Similarity=0.496 Sum_probs=189.4
Q ss_pred EEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCC-----cceEEECCccCCCC--ChH
Q 000789 1040 IELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPD-----SGHVLLDNIELPKF--KLS 1112 (1283)
Q Consensus 1040 I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~-----~G~I~idG~di~~~--~~~ 1112 (1283)
|+++||+++|++ .++++|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|.+||.++... +..
T Consensus 2 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~ 78 (247)
T TIGR00972 2 IEIENLNLFYGE---KEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVV 78 (247)
T ss_pred EEEEEEEEEECC---eeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchH
Confidence 789999999974 35999999999999999999999999999999999999998 99999999998763 456
Q ss_pred HHhcceEEEccCCCCChhhHHHHHhcCCC-CC-CC----HHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHH
Q 000789 1113 WLRQQMGLVSQEPVLFNETIRTNIAYGKQ-GG-AT----EEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQ 1186 (1283)
Q Consensus 1113 ~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~-~~-~s----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQ 1186 (1283)
.+|++++||||++.+|..|++||+.++.. .. .+ ++++.++++..++.+++. ........+|||||||
T Consensus 79 ~~~~~i~~v~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSgG~~q 151 (247)
T TIGR00972 79 ELRRRVGMVFQKPNPFPMSIYDNIAYGPRLHGIKDKKELDEIVEESLKKAALWDEVK-------DRLHDSALGLSGGQQQ 151 (247)
T ss_pred HHHhheEEEecCcccCCCCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCcchh-------hHhhCCcccCCHHHHH
Confidence 67889999999999999999999986421 11 12 234566677777653331 1223345689999999
Q ss_pred HHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcCCceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHHH
Q 000789 1187 RIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDALM 1265 (1283)
Q Consensus 1187 RlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl 1265 (1283)
|++|||||+++|++|||||||++||+.+...+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|++++++
T Consensus 152 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 231 (247)
T TIGR00972 152 RLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKKKYTIVIVTHNMQQAARISDRTAFFYDGELVEYGPTEQIF 231 (247)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999998767899999999998865 9999999999999999999998
Q ss_pred hccCchh
Q 000789 1266 KITDGAY 1272 (1283)
Q Consensus 1266 ~~~~g~y 1272 (1283)
..+...+
T Consensus 232 ~~~~~~~ 238 (247)
T TIGR00972 232 TNPKEKR 238 (247)
T ss_pred hCCCChH
Confidence 6544443
No 191
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-42 Score=401.53 Aligned_cols=225 Identities=37% Similarity=0.614 Sum_probs=190.9
Q ss_pred EEEEEEEEECCCCC-CCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHH---Hh
Q 000789 375 IELRDVYFRYPARP-EVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKW---IR 450 (1283)
Q Consensus 375 i~~~~v~f~y~~~~-~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~---~r 450 (1283)
|+++||+|+|++.. +.++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++..++... +|
T Consensus 2 i~i~~l~~~y~~~~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~ 81 (343)
T PRK11153 2 IELKNISKVFPQGGRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPTSGRVLVDGQDLTALSEKELRKAR 81 (343)
T ss_pred EEEEeEEEEeCCCCCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 78999999997311 346999999999999999999999999999999999999999999999999998876543 47
Q ss_pred cccEEEccCCCCCc-ccHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHH
Q 000789 451 EKIGLVSQEPILFA-TSLRENIAYGKE--NATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARA 527 (1283)
Q Consensus 451 ~~i~~v~Q~~~l~~-~ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARa 527 (1283)
++||||+|++.+|. .|++||+.++.. ..+.++..+ .+.+.++.+ |++......+.+||||||||++||||
T Consensus 82 ~~ig~v~q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~-----~~~~~l~~~--gL~~~~~~~~~~LSgGq~qRv~lAra 154 (343)
T PRK11153 82 RQIGMIFQHFNLLSSRTVFDNVALPLELAGTPKAEIKA-----RVTELLELV--GLSDKADRYPAQLSGGQKQRVAIARA 154 (343)
T ss_pred cCEEEEeCCCccCCCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CCchhhhCChhhCCHHHHHHHHHHHH
Confidence 88999999999986 599999988632 122222211 223455555 66666667778999999999999999
Q ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHHhcCCCC
Q 000789 528 ILKNPKILLLDEATSALDAESERIVQDALVKIMT--SRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDELIKDPEG 604 (1283)
Q Consensus 528 l~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~~~~ 604 (1283)
|+++|++|||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++...+..
T Consensus 155 L~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~~i~~~~d~v~~l~~G~i~~~g~~~~~~~~~~~ 234 (343)
T PRK11153 155 LASNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMDVVKRICDRVAVIDAGRLVEQGTVSEVFSHPKH 234 (343)
T ss_pred HHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCCCc
Confidence 9999999999999999999999999999998853 6899999999999876 999999999999999999999876443
Q ss_pred hh
Q 000789 605 PY 606 (1283)
Q Consensus 605 ~~ 606 (1283)
.+
T Consensus 235 ~~ 236 (343)
T PRK11153 235 PL 236 (343)
T ss_pred HH
Confidence 33
No 192
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-42 Score=385.36 Aligned_cols=219 Identities=30% Similarity=0.492 Sum_probs=187.1
Q ss_pred cEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCC---CCCceEEECCcccCCCCHHHHh
Q 000789 374 EIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYD---PDAGEVLIDGIDIKKLQLKWIR 450 (1283)
Q Consensus 374 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~---~~~G~i~~~g~~~~~~~~~~~r 450 (1283)
.|+++|+++.|++ .++|+|+||++++||+++|+||||||||||+++|+|+++ |++|+|.+||+++.+.+....|
T Consensus 2 ~~~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~ 78 (246)
T PRK14269 2 IAKTTNLNLFYGK---KQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALR 78 (246)
T ss_pred ceeeeeeEEEECC---EeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHh
Confidence 3789999999973 369999999999999999999999999999999999985 6999999999999888777888
Q ss_pred cccEEEccCCCCCcccHHHHHhcCCCC--C------CHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHH
Q 000789 451 EKIGLVSQEPILFATSLRENIAYGKEN--A------TDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRI 522 (1283)
Q Consensus 451 ~~i~~v~Q~~~l~~~ti~~ni~~~~~~--~------~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri 522 (1283)
+.++|+||++.+|+.|++||+.++... . .++++.++++..++.+++ .+...+.+.+||||||||+
T Consensus 79 ~~i~~~~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LS~G~~qrv 151 (246)
T PRK14269 79 KNVGMVFQQPNVFVKSIYENISYAPKLHGMIKNKDEEEALVVDCLQKVGLFEEV-------KDKLKQNALALSGGQQQRL 151 (246)
T ss_pred hhEEEEecCCccccccHHHHhhhHHhhcCcccChHHHHHHHHHHHHHcCCChhh-------hHHhcCCcccCCHHHHHHH
Confidence 899999999999999999999876311 0 011233333333332222 2335667789999999999
Q ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHHhcC
Q 000789 523 AIARAILKNPKILLLDEATSALDAESERIVQDALVKIMTSRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDELIKD 601 (1283)
Q Consensus 523 aiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~ 601 (1283)
+|||||+++|++|||||||++||+.+...+.+.|.++.+++|+|+|||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 152 ~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 231 (246)
T PRK14269 152 CIARALAIKPKLLLLDEPTSALDPISSGVIEELLKELSHNLSMIMVTHNMQQGKRVADYTAFFHLGELIEFGESKEFFEN 231 (246)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhCcEEEEEECCEEEEECCHHHHHhC
Confidence 9999999999999999999999999999999999998778999999999999865 999999999999999999998765
Q ss_pred C
Q 000789 602 P 602 (1283)
Q Consensus 602 ~ 602 (1283)
+
T Consensus 232 ~ 232 (246)
T PRK14269 232 P 232 (246)
T ss_pred C
Confidence 3
No 193
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-42 Score=393.97 Aligned_cols=217 Identities=28% Similarity=0.478 Sum_probs=184.3
Q ss_pred EEEEEEEEECCCCCC--cccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCC----CChHH
Q 000789 1040 IELRCVSFKYPTRPD--VQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPK----FKLSW 1113 (1283)
Q Consensus 1040 I~~~nVsf~Y~~~~~--~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~----~~~~~ 1113 (1283)
|+++||+|+|+.... .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|++||.++.. .+...
T Consensus 2 i~~~~v~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 81 (288)
T PRK13643 2 IKFEKVNYTYQPNSPFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPTEGKVTVGDIVVSSTSKQKEIKP 81 (288)
T ss_pred EEEEEEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCcEEEECCEECccccccccHHH
Confidence 789999999974311 359999999999999999999999999999999999999999999999999863 34567
Q ss_pred HhcceEEEccCC--CCChhhHHHHHhcCCC-CCCCHH----HHHHHHHHhChH-HHHHhCCCCcccccCCCCCCCChhHH
Q 000789 1114 LRQQMGLVSQEP--VLFNETIRTNIAYGKQ-GGATEE----EIIAATEASNAH-NFISALPHGYETNVGERGVQLSGGQK 1185 (1283)
Q Consensus 1114 lR~~i~~V~Qdp--~Lf~gTIreNl~~g~~-~~~sd~----ei~~al~~a~l~-~~I~~lp~Gldt~vge~G~~LSgGQr 1185 (1283)
+|+.++||+|+| .+|..|+.||+.++.. ...+.+ ++.++++.+++. ++ ......+||||||
T Consensus 82 ~~~~ig~v~q~~~~~l~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~-----------~~~~~~~LSgGqk 150 (288)
T PRK13643 82 VRKKVGVVFQFPESQLFEETVLKDVAFGPQNFGIPKEKAEKIAAEKLEMVGLADEF-----------WEKSPFELSGGQM 150 (288)
T ss_pred HHhhEEEEecCcchhcccchHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCChhh-----------ccCCcccCCHHHH
Confidence 899999999998 7899999999987632 123333 344555555552 22 2334468999999
Q ss_pred HHHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchHHh-hcCEEEEEeCCEEEEecChHH
Q 000789 1186 QRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVM-VNRTTVVVAHRLTTIK-NADIIAVVKNGVIAEQGSHDA 1263 (1283)
Q Consensus 1186 QRlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHrl~ti~-~~D~I~vl~~G~Ive~Gt~~e 1263 (1283)
||++|||||+.+|+||||||||++||+.+.+.+.+.|+++. +++|+|+|||+++.+. .||+|++|++|++++.|++++
T Consensus 151 qrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~~~~~~~dri~~l~~G~i~~~g~~~~ 230 (288)
T PRK13643 151 RRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMDDVADYADYVYLLEKGHIISCGTPSD 230 (288)
T ss_pred HHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHH
Confidence 99999999999999999999999999999999999998875 4789999999999885 499999999999999999999
Q ss_pred HHhc
Q 000789 1264 LMKI 1267 (1283)
Q Consensus 1264 Ll~~ 1267 (1283)
+...
T Consensus 231 ~~~~ 234 (288)
T PRK13643 231 VFQE 234 (288)
T ss_pred HHcC
Confidence 8753
No 194
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.9e-42 Score=382.26 Aligned_cols=212 Identities=34% Similarity=0.504 Sum_probs=181.6
Q ss_pred EEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHhcceE
Q 000789 1040 IELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMG 1119 (1283)
Q Consensus 1040 I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~ 1119 (1283)
|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+. .+++++
T Consensus 3 l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~--~~~~i~ 77 (239)
T cd03296 3 IEVRNVSKRFGD---FVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPDSGTILFGGEDATDVPV--QERNVG 77 (239)
T ss_pred EEEEeEEEEECC---EEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCc--cccceE
Confidence 789999999974 359999999999999999999999999999999999999999999999999876553 367899
Q ss_pred EEccCCCCCh-hhHHHHHhcCCCC-CC----C----HHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHH
Q 000789 1120 LVSQEPVLFN-ETIRTNIAYGKQG-GA----T----EEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIA 1189 (1283)
Q Consensus 1120 ~V~Qdp~Lf~-gTIreNl~~g~~~-~~----s----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRla 1189 (1283)
||||+|.+|. .|++||+.++... .. + ++++.++++..++.++.. ....+||||||||++
T Consensus 78 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrl~ 146 (239)
T cd03296 78 FVFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIRAKVHELLKLVQLDWLAD-----------RYPAQLSGGQRQRVA 146 (239)
T ss_pred EEecCCcccCCCCHHHHHhhhhhhccccccCCHHHHHHHHHHHHHHcCChhhhh-----------cChhhCCHHHHHHHH
Confidence 9999999885 6999999875210 11 1 123455566655544433 334589999999999
Q ss_pred HHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHHHh
Q 000789 1190 IARAVLKNPKILLLDEATSALDAESERVVQDALERVMV--NRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDALMK 1266 (1283)
Q Consensus 1190 iARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl~ 1266 (1283)
|||||+++|++|||||||++||+++.+.+.+.|+++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 147 la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 226 (239)
T cd03296 147 LARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQEEALEVADRVVVMNKGRIEQVGTPDEVYD 226 (239)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHHhc
Confidence 99999999999999999999999999999999998753 7899999999998765 99999999999999999999986
Q ss_pred c
Q 000789 1267 I 1267 (1283)
Q Consensus 1267 ~ 1267 (1283)
.
T Consensus 227 ~ 227 (239)
T cd03296 227 H 227 (239)
T ss_pred C
Confidence 4
No 195
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=2.7e-42 Score=379.06 Aligned_cols=212 Identities=26% Similarity=0.441 Sum_probs=181.4
Q ss_pred EEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHhcceE
Q 000789 1040 IELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMG 1119 (1283)
Q Consensus 1040 I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~ 1119 (1283)
|+++||+++|++. ..++|+|+||+|++||.+||+||||||||||+++|+|+++|++|+|.+||.++.... ..+|++++
T Consensus 1 l~~~~l~~~~~~~-~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~-~~~~~~i~ 78 (220)
T cd03263 1 LQIRNLTKTYKKG-TKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPTSGTAYINGYSIRTDR-KAARQSLG 78 (220)
T ss_pred CEEEeeEEEeCCC-CceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccch-HHHhhhEE
Confidence 5789999999742 146999999999999999999999999999999999999999999999999987643 56788999
Q ss_pred EEccCCCCC-hhhHHHHHhcCCC-CCCCH----HHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHHHH
Q 000789 1120 LVSQEPVLF-NETIRTNIAYGKQ-GGATE----EEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARA 1193 (1283)
Q Consensus 1120 ~V~Qdp~Lf-~gTIreNl~~g~~-~~~sd----~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiARA 1193 (1283)
||+|++.+| ..|++||+.+... ...+. +++.++++..++.+.. ++. ..+||||||||++||||
T Consensus 79 ~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~----~~~LS~G~~qrv~la~a 147 (220)
T cd03263 79 YCPQFDALFDELTVREHLRFYARLKGLPKSEIKEEVELLLRVLGLTDKA-------NKR----ARTLSGGMKRKLSLAIA 147 (220)
T ss_pred EecCcCCccccCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHH-------hCh----hhhCCHHHHHHHHHHHH
Confidence 999999988 6799999976311 11222 3455566666554433 222 34799999999999999
Q ss_pred HccCCCEEEEecccCCCCHHHHHHHHHHHHHHcCCceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHH
Q 000789 1194 VLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDAL 1264 (1283)
Q Consensus 1194 ll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eL 1264 (1283)
++++|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 148 l~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 219 (220)
T cd03263 148 LIGGPSVLLLDEPTSGLDPASRRAIWDLILEVRKGRSIILTTHSMDEAEALCDRIAIMSDGKLRCIGSPQEL 219 (220)
T ss_pred HhcCCCEEEECCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecCCHHHc
Confidence 99999999999999999999999999999998777999999999999875 999999999999999999875
No 196
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.5e-42 Score=384.90 Aligned_cols=214 Identities=36% Similarity=0.567 Sum_probs=182.9
Q ss_pred EEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCC---hHHHhc
Q 000789 1040 IELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFK---LSWLRQ 1116 (1283)
Q Consensus 1040 I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~---~~~lR~ 1116 (1283)
|+++||+++|+++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+ ...+|+
T Consensus 1 l~~~~l~~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 78 (241)
T cd03256 1 IEVENLSKTYPNG--KKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPTSGSVLIDGTDINKLKGKALRQLRR 78 (241)
T ss_pred CEEeeEEEecCCc--cEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEeccccCHhHHHHHHh
Confidence 4789999999741 46999999999999999999999999999999999999999999999999998776 456788
Q ss_pred ceEEEccCCCCCh-hhHHHHHhcCCCC-------------CCCHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCCh
Q 000789 1117 QMGLVSQEPVLFN-ETIRTNIAYGKQG-------------GATEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSG 1182 (1283)
Q Consensus 1117 ~i~~V~Qdp~Lf~-gTIreNl~~g~~~-------------~~sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSg 1182 (1283)
.++|+||++.+|. .|++||+.++... ...++++.++++..++.+ .....+.+|||
T Consensus 79 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LS~ 147 (241)
T cd03256 79 QIGMIFQQFNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERVGLLD-----------KAYQRADQLSG 147 (241)
T ss_pred ccEEEcccCcccccCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHcCChh-----------hhCCCcccCCH
Confidence 9999999998886 6999999864211 011233445555555433 23445568999
Q ss_pred hHHHHHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHc--CCceEEEEecCchHHhh-cCEEEEEeCCEEEEec
Q 000789 1183 GQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVM--VNRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQG 1259 (1283)
Q Consensus 1183 GQrQRlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~--~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~G 1259 (1283)
|||||++||||++++|+|||||||||+||+.+...+.+.|+++. .++|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 148 G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~G~i~~~~ 227 (241)
T cd03256 148 GQQQRVAIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVDLAREYADRIVGLKDGRIVFDG 227 (241)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeec
Confidence 99999999999999999999999999999999999999999875 37899999999999985 9999999999999999
Q ss_pred ChHHHHh
Q 000789 1260 SHDALMK 1266 (1283)
Q Consensus 1260 t~~eLl~ 1266 (1283)
+++++.+
T Consensus 228 ~~~~~~~ 234 (241)
T cd03256 228 PPAELTD 234 (241)
T ss_pred CHHHhhH
Confidence 9998743
No 197
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.4e-42 Score=389.69 Aligned_cols=220 Identities=32% Similarity=0.495 Sum_probs=186.8
Q ss_pred EEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHH----hc
Q 000789 1041 ELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWL----RQ 1116 (1283)
Q Consensus 1041 ~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~l----R~ 1116 (1283)
.++||+++|+. .++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.+||.++.+.+...+ ++
T Consensus 26 ~~~~~~~~~~~---~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~~ 102 (269)
T cd03294 26 SKEEILKKTGQ---TVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQDIAAMSRKELRELRRK 102 (269)
T ss_pred hhhhhhhhcCC---ceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccChhhhhhhhcC
Confidence 45677777763 358999999999999999999999999999999999999999999999999987765443 46
Q ss_pred ceEEEccCCCCC-hhhHHHHHhcCCC-CCC----CHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHH
Q 000789 1117 QMGLVSQEPVLF-NETIRTNIAYGKQ-GGA----TEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAI 1190 (1283)
Q Consensus 1117 ~i~~V~Qdp~Lf-~gTIreNl~~g~~-~~~----sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlai 1190 (1283)
+++|+||++.+| +.|++||+.++.. ... .++++.++++..++.+++...| .+||||||||++|
T Consensus 103 ~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~Gq~qrv~l 171 (269)
T cd03294 103 KISMVFQSFALLPHRTVLENVAFGLEVQGVPRAEREERAAEALELVGLEGWEHKYP-----------DELSGGMQQRVGL 171 (269)
T ss_pred cEEEEecCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCCc-----------ccCCHHHHHHHHH
Confidence 899999999988 5699999976411 111 1345667777777776665544 3799999999999
Q ss_pred HHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHHHhc
Q 000789 1191 ARAVLKNPKILLLDEATSALDAESERVVQDALERVMV--NRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDALMKI 1267 (1283)
Q Consensus 1191 ARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl~~ 1267 (1283)
||||+++|+||||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+.. ||++++|++|++++.|+++++++.
T Consensus 172 Aral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 251 (269)
T cd03294 172 ARALAVDPDILLMDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLDEALRLGDRIAIMKDGRLVQVGTPEEILTN 251 (269)
T ss_pred HHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHHhC
Confidence 9999999999999999999999999999999998753 7899999999998865 999999999999999999999876
Q ss_pred cCchhHH
Q 000789 1268 TDGAYAS 1274 (1283)
Q Consensus 1268 ~~g~y~~ 1274 (1283)
+...|.+
T Consensus 252 ~~~~~~~ 258 (269)
T cd03294 252 PANDYVR 258 (269)
T ss_pred cCcHHHH
Confidence 5555544
No 198
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.2e-42 Score=391.88 Aligned_cols=221 Identities=33% Similarity=0.544 Sum_probs=185.7
Q ss_pred EEEEEEEEECCCCC--CcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCC----ChHH
Q 000789 1040 IELRCVSFKYPTRP--DVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKF----KLSW 1113 (1283)
Q Consensus 1040 I~~~nVsf~Y~~~~--~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~----~~~~ 1113 (1283)
|+++||+++|++.+ ..++|+||||+|++||++||+|+||||||||+++|+|+++|++|+|.+||+++... +...
T Consensus 3 l~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (286)
T PRK13646 3 IRFDNVSYTYQKGTPYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYIRP 82 (286)
T ss_pred EEEEEEEEEECCCCccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 89999999997432 13699999999999999999999999999999999999999999999999998653 3457
Q ss_pred HhcceEEEccCC--CCChhhHHHHHhcCCCC-CCCHHHHHHHHHHhChHHHHHhCCCCccc-ccCCCCCCCChhHHHHHH
Q 000789 1114 LRQQMGLVSQEP--VLFNETIRTNIAYGKQG-GATEEEIIAATEASNAHNFISALPHGYET-NVGERGVQLSGGQKQRIA 1189 (1283)
Q Consensus 1114 lR~~i~~V~Qdp--~Lf~gTIreNl~~g~~~-~~sd~ei~~al~~a~l~~~I~~lp~Gldt-~vge~G~~LSgGQrQRla 1189 (1283)
+|++|+||||+| .+|..|+.|||.++... ..+.++..+. +.+.+..+ |+++ .......+||||||||++
T Consensus 83 ~~~~ig~v~q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~-----~~~~l~~~--gL~~~~~~~~~~~LSgGq~qrv~ 155 (286)
T PRK13646 83 VRKRIGMVFQFPESQLFEDTVEREIIFGPKNFKMNLDEVKNY-----AHRLLMDL--GFSRDVMSQSPFQMSGGQMRKIA 155 (286)
T ss_pred HHhheEEEecChHhccchhhHHHHHHhhHHHcCCCHHHHHHH-----HHHHHHHc--CCChhhhhCCcccCCHHHHHHHH
Confidence 899999999998 68889999999876211 2344333321 12333333 5553 234566789999999999
Q ss_pred HHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHc--CCceEEEEecCchHHh-hcCEEEEEeCCEEEEecChHHHHh
Q 000789 1190 IARAVLKNPKILLLDEATSALDAESERVVQDALERVM--VNRTTVVVAHRLTTIK-NADIIAVVKNGVIAEQGSHDALMK 1266 (1283)
Q Consensus 1190 iARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~--~~~TvI~IaHrl~ti~-~~D~I~vl~~G~Ive~Gt~~eLl~ 1266 (1283)
|||||+.+|+||||||||++||+.+...+.+.|+++. .++|+|+|||+++.+. .||+|++|++|++++.|+++++.+
T Consensus 156 laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~ 235 (286)
T PRK13646 156 IVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMNEVARYADEVIVMKEGSIVSQTSPKELFK 235 (286)
T ss_pred HHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 9999999999999999999999999999999999874 3789999999999885 599999999999999999999876
Q ss_pred c
Q 000789 1267 I 1267 (1283)
Q Consensus 1267 ~ 1267 (1283)
.
T Consensus 236 ~ 236 (286)
T PRK13646 236 D 236 (286)
T ss_pred C
Confidence 4
No 199
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=2.5e-42 Score=383.60 Aligned_cols=222 Identities=31% Similarity=0.529 Sum_probs=189.0
Q ss_pred EEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHH-hccc
Q 000789 375 IELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWI-REKI 453 (1283)
Q Consensus 375 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~-r~~i 453 (1283)
|+++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+ +..+
T Consensus 1 l~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (236)
T cd03219 1 LEVRGLTKRFGG---LVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPTSGSVLFDGEDITGLPPHEIARLGI 77 (236)
T ss_pred CeeeeeEEEECC---EEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEECCCCCHHHHHhcCE
Confidence 468999999963 359999999999999999999999999999999999999999999999999987776544 5679
Q ss_pred EEEccCCCCCcc-cHHHHHhcCCCCCCHHHH-------HHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHH
Q 000789 454 GLVSQEPILFAT-SLRENIAYGKENATDQEI-------RTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIA 525 (1283)
Q Consensus 454 ~~v~Q~~~l~~~-ti~~ni~~~~~~~~~~~~-------~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiA 525 (1283)
+|++|++.+|++ |++||+.++........+ ........+++.++.+ |++........+||||||||++||
T Consensus 78 ~~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la 155 (236)
T cd03219 78 GRTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREARERAEELLERV--GLADLADRPAGELSYGQQRRLEIA 155 (236)
T ss_pred EEEecccccccCCCHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHc--CccchhhCChhhCCHHHHHHHHHH
Confidence 999999999986 999999886432110000 0011112345566666 787777888899999999999999
Q ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHHhcC
Q 000789 526 RAILKNPKILLLDEATSALDAESERIVQDALVKIM-TSRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDELIKD 601 (1283)
Q Consensus 526 Ral~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~ 601 (1283)
|||+.+|++|||||||++||+.+.+.+.+.|+++. +++|+|++||+++.+.. ||+|++|++|++++.|+++++..+
T Consensus 156 ~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 233 (236)
T cd03219 156 RALATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMDVVMSLADRVTVLDQGRVIAEGTPDEVRNN 233 (236)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEeecCHHHhccC
Confidence 99999999999999999999999999999999876 57899999999999876 999999999999999999988654
No 200
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=5.1e-42 Score=398.12 Aligned_cols=218 Identities=32% Similarity=0.517 Sum_probs=188.9
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHhcce
Q 000789 1039 AIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQM 1118 (1283)
Q Consensus 1039 ~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i 1118 (1283)
.|+++||+++|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|++||.++.+.+. .+++|
T Consensus 2 ~L~i~~l~~~~~~---~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~i 76 (353)
T PRK10851 2 SIEIANIKKSFGR---TQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDVSRLHA--RDRKV 76 (353)
T ss_pred EEEEEEEEEEeCC---eEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCH--HHCCE
Confidence 3889999999974 359999999999999999999999999999999999999999999999999987653 46789
Q ss_pred EEEccCCCCCh-hhHHHHHhcCCCC-----CCC----HHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHH
Q 000789 1119 GLVSQEPVLFN-ETIRTNIAYGKQG-----GAT----EEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRI 1188 (1283)
Q Consensus 1119 ~~V~Qdp~Lf~-gTIreNl~~g~~~-----~~s----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRl 1188 (1283)
+||||++.+|. .|++||+.++... ..+ ++++.++++..++.++..+.| ..||||||||+
T Consensus 77 ~~v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----------~~LSgGq~QRv 145 (353)
T PRK10851 77 GFVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLAHLADRYP-----------AQLSGGQKQRV 145 (353)
T ss_pred EEEecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCchhhhCCh-----------hhCCHHHHHHH
Confidence 99999999996 5999999976321 122 235566777777765544433 48999999999
Q ss_pred HHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHHH
Q 000789 1189 AIARAVLKNPKILLLDEATSALDAESERVVQDALERVMV--NRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDALM 1265 (1283)
Q Consensus 1189 aiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl 1265 (1283)
+|||||+++|++||||||||+||+.+...+.+.|+++.+ ++|+|+|||+++.+.. ||+|++|++|+|++.|+++++.
T Consensus 146 alArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~ea~~~~Dri~vl~~G~i~~~g~~~~i~ 225 (353)
T PRK10851 146 ALARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEAMEVADRVVVMSQGNIEQAGTPDQVW 225 (353)
T ss_pred HHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 999999999999999999999999999999999998764 6899999999998766 9999999999999999999998
Q ss_pred hccCchh
Q 000789 1266 KITDGAY 1272 (1283)
Q Consensus 1266 ~~~~g~y 1272 (1283)
+++...|
T Consensus 226 ~~p~~~~ 232 (353)
T PRK10851 226 REPATRF 232 (353)
T ss_pred hCccchH
Confidence 8655444
No 201
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.3e-42 Score=386.46 Aligned_cols=220 Identities=30% Similarity=0.502 Sum_probs=188.9
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCC-----CCcceEEECCccCCC--CCh
Q 000789 1039 AIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYD-----PDSGHVLLDNIELPK--FKL 1111 (1283)
Q Consensus 1039 ~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~-----~~~G~I~idG~di~~--~~~ 1111 (1283)
.|+++||+++|++ .++|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.+||.++.. .+.
T Consensus 6 ~l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 82 (253)
T PRK14242 6 KMEARGLSFFYGD---FQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVDV 82 (253)
T ss_pred EEEEeeeEEEECC---eeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccCH
Confidence 4999999999973 359999999999999999999999999999999999975 589999999999865 345
Q ss_pred HHHhcceEEEccCCCCChhhHHHHHhcCCC-CCC-----CHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHH
Q 000789 1112 SWLRQQMGLVSQEPVLFNETIRTNIAYGKQ-GGA-----TEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQK 1185 (1283)
Q Consensus 1112 ~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~-~~~-----sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQr 1185 (1283)
..+|++++||||++.+|..|++||+.++.. ... .++++.++++.+++.+.+.. .......+||||||
T Consensus 83 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LSgGq~ 155 (253)
T PRK14242 83 VELRRRVGMVFQKPNPFPKSIFENVAYGLRVNGVKDKAYLAERVERSLRHAALWDEVKD-------RLHESALGLSGGQQ 155 (253)
T ss_pred HHHhhcEEEEecCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCchhhhH-------HhhCCcccCCHHHH
Confidence 577899999999999999999999986421 111 23456677777777554322 23445568999999
Q ss_pred HHHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcCCceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHH
Q 000789 1186 QRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDAL 1264 (1283)
Q Consensus 1186 QRlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eL 1264 (1283)
||++||||++++|+||||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 156 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 235 (253)
T PRK14242 156 QRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELKARYTIIIVTHNMQQAARVSDVTAFFYMGKLIEVGPTEQI 235 (253)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCeEEEEEecHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998667899999999999865 999999999999999999999
Q ss_pred Hhcc
Q 000789 1265 MKIT 1268 (1283)
Q Consensus 1265 l~~~ 1268 (1283)
.+.+
T Consensus 236 ~~~~ 239 (253)
T PRK14242 236 FTRP 239 (253)
T ss_pred HcCC
Confidence 8653
No 202
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=4e-42 Score=402.31 Aligned_cols=214 Identities=24% Similarity=0.425 Sum_probs=191.8
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHhcce
Q 000789 1039 AIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQM 1118 (1283)
Q Consensus 1039 ~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i 1118 (1283)
.|+++||+++|++ .++|+|+||+|++||+++|+||||||||||+++|.|+++|++|+|.++|.++.+++...+|++|
T Consensus 3 ~L~~~nls~~y~~---~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~sG~I~l~G~~i~~~~~~~~~~~i 79 (402)
T PRK09536 3 MIDVSDLSVEFGD---TTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPTAGTVLVAGDDVEALSARAASRRV 79 (402)
T ss_pred eEEEeeEEEEECC---EEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCCCcEEEECCEEcCcCCHHHHhcce
Confidence 4899999999974 4699999999999999999999999999999999999999999999999999999988999999
Q ss_pred EEEccCCCC-ChhhHHHHHhcCCCC---------CCCHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHH
Q 000789 1119 GLVSQEPVL-FNETIRTNIAYGKQG---------GATEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRI 1188 (1283)
Q Consensus 1119 ~~V~Qdp~L-f~gTIreNl~~g~~~---------~~sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRl 1188 (1283)
+||||++.+ |+.|++||+.++..+ ...++.+.++++.+++.++..+ ...+||||||||+
T Consensus 80 g~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~~~~-----------~~~~LSgGerQRv 148 (402)
T PRK09536 80 ASVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQFADR-----------PVTSLSGGERQRV 148 (402)
T ss_pred EEEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCchhhcC-----------ChhhCCHHHHHHH
Confidence 999999987 688999999876321 1123457888888888766533 2347999999999
Q ss_pred HHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHHHh
Q 000789 1189 AIARAVLKNPKILLLDEATSALDAESERVVQDALERVM-VNRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDALMK 1266 (1283)
Q Consensus 1189 aiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl~ 1266 (1283)
+|||||+++|+||||||||++||+.+...+++.|+++. +++|+|+++|+++.+.. |||+++|++|++++.|+++|++.
T Consensus 149 ~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~~~~~~adrii~l~~G~iv~~G~~~ev~~ 228 (402)
T PRK09536 149 LLARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLDLAARYCDELVLLADGRVRAAGPPADVLT 228 (402)
T ss_pred HHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHhC
Confidence 99999999999999999999999999999999999875 47899999999999955 99999999999999999999875
No 203
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7e-42 Score=388.96 Aligned_cols=220 Identities=33% Similarity=0.583 Sum_probs=186.6
Q ss_pred EEEEEEEEECCCCC--CCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCC--HHHHh
Q 000789 375 IELRDVYFRYPARP--EVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQ--LKWIR 450 (1283)
Q Consensus 375 i~~~~v~f~y~~~~--~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~--~~~~r 450 (1283)
|+++||+|+|++.. .+++|+||||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+ ...++
T Consensus 3 l~~~~l~~~y~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 82 (287)
T PRK13637 3 IKIENLTHIYMEGTPFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPTSGKIIIDGVDITDKKVKLSDIR 82 (287)
T ss_pred EEEEEEEEECCCCCccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCccEEEECCEECCCcCccHHHHh
Confidence 78999999997421 136999999999999999999999999999999999999999999999999997654 35678
Q ss_pred cccEEEccCC--CCCcccHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhCCCCcc--ccccCCCCCCChHHHHHHHH
Q 000789 451 EKIGLVSQEP--ILFATSLRENIAYGKE--NATDQEIRTAIELANAAKFIDKLPKGLD--TMAGEHGTQLSGGQKQRIAI 524 (1283)
Q Consensus 451 ~~i~~v~Q~~--~l~~~ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~lp~g~~--t~~~~~g~~LSgGqkqriai 524 (1283)
++||||||+| .+|+.|++|||.++.. ..+.++..+.+ .+.++.+ |++ +.....+..||||||||++|
T Consensus 83 ~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~-----~~~l~~~--gL~~~~~~~~~~~~LSgGq~qrv~i 155 (287)
T PRK13637 83 KKVGLVFQYPEYQLFEETIEKDIAFGPINLGLSEEEIENRV-----KRAMNIV--GLDYEDYKDKSPFELSGGQKRRVAI 155 (287)
T ss_pred hceEEEecCchhccccccHHHHHHhHHHHCCCCHHHHHHHH-----HHHHHHc--CCCchhhccCCcccCCHHHHHHHHH
Confidence 8999999998 5788999999998632 12333332221 2334443 554 45677788999999999999
Q ss_pred HHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhh-ccCEEEEEeCCEEeEecChhHHhcC
Q 000789 525 ARAILKNPKILLLDEATSALDAESERIVQDALVKIMT--SRTTVVVAHRLTTIR-NADLIAVVHQGKIVEKGTHDELIKD 601 (1283)
Q Consensus 525 ARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~-~~d~i~vl~~G~i~~~g~~~~l~~~ 601 (1283)
||||+.+|++|||||||++||+.+...+.+.|+++.+ ++|+|+|||+++.+. .||+|++|++|++++.|+++++.+.
T Consensus 156 AraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~drv~~l~~G~i~~~g~~~~~~~~ 235 (287)
T PRK13637 156 AGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSMEDVAKLADRIIVMNKGKCELQGTPREVFKE 235 (287)
T ss_pred HHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHHhC
Confidence 9999999999999999999999999999999998853 689999999999985 5999999999999999999998754
No 204
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=2e-42 Score=378.79 Aligned_cols=204 Identities=33% Similarity=0.519 Sum_probs=175.8
Q ss_pred EEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChH---HHhc
Q 000789 1040 IELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLS---WLRQ 1116 (1283)
Q Consensus 1040 I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~---~lR~ 1116 (1283)
|+++||+++|++. ..++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++.+.+.. .+|+
T Consensus 2 l~~~~l~~~~~~~-~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (216)
T TIGR00960 2 IRFEQVSKAYPGG-HQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPTRGKIRFNGQDLTRLRGREIPFLRR 80 (216)
T ss_pred eEEEEEEEEecCC-CeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEehhhcChhHHHHHHH
Confidence 7899999999642 23599999999999999999999999999999999999999999999999998776543 4788
Q ss_pred ceEEEccCCCCCh-hhHHHHHhcCCC-CC----CCHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHH
Q 000789 1117 QMGLVSQEPVLFN-ETIRTNIAYGKQ-GG----ATEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAI 1190 (1283)
Q Consensus 1117 ~i~~V~Qdp~Lf~-gTIreNl~~g~~-~~----~sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlai 1190 (1283)
+++|+||+|.+|. .|++||+.++.. .. ..++++.++++..++.++....| .+||||||||++|
T Consensus 81 ~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LSgG~~qrv~l 149 (216)
T TIGR00960 81 HIGMVFQDHRLLSDRTVYDNVAFPLRIIGVPPRDANERVSAALEKVGLEGKAHALP-----------MQLSGGEQQRVAI 149 (216)
T ss_pred hceEEecCccccccccHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhhCCh-----------hhCCHHHHHHHHH
Confidence 9999999999886 599999986411 01 12355677788777766654443 3799999999999
Q ss_pred HHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchHHhh-cCEEEEEeCCEE
Q 000789 1191 ARAVLKNPKILLLDEATSALDAESERVVQDALERVM-VNRTTVVVAHRLTTIKN-ADIIAVVKNGVI 1255 (1283)
Q Consensus 1191 ARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHrl~ti~~-~D~I~vl~~G~I 1255 (1283)
||||+++|++|||||||++||+++.+.+.+.|+++. +++|+|+|||+++.+.. ||+|++|++|+|
T Consensus 150 aral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i 216 (216)
T TIGR00960 150 ARAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDINLVETYRHRTLTLSRGRL 216 (216)
T ss_pred HHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 999999999999999999999999999999999874 47899999999999976 999999999975
No 205
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.7e-42 Score=380.41 Aligned_cols=224 Identities=35% Similarity=0.636 Sum_probs=190.7
Q ss_pred cEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHHhccc
Q 000789 374 EIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWIREKI 453 (1283)
Q Consensus 374 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 453 (1283)
.|+++|++|+|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+|+.+
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 79 (241)
T PRK14250 3 EIEFKEVSYSSFG---KEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPTEGSILIDGVDIKTIDVIDLRRKI 79 (241)
T ss_pred eEEEEeEEEEeCC---eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcChHHhhhcE
Confidence 4899999999963 3599999999999999999999999999999999999999999999999999877777788899
Q ss_pred EEEccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCcc-ccccCCCCCCChHHHHHHHHHHHHhcCC
Q 000789 454 GLVSQEPILFATSLRENIAYGKENATDQEIRTAIELANAAKFIDKLPKGLD-TMAGEHGTQLSGGQKQRIAIARAILKNP 532 (1283)
Q Consensus 454 ~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~-t~~~~~g~~LSgGqkqriaiARal~~~~ 532 (1283)
+|++|++.+|+.|++||+.++.......+ ..+.+.++.+ |++ ......+.+||||||||++||||++++|
T Consensus 80 ~~~~q~~~~~~~tv~e~l~~~~~~~~~~~-------~~~~~~l~~~--~l~~~~~~~~~~~LS~G~~qrl~la~al~~~p 150 (241)
T PRK14250 80 GMVFQQPHLFEGTVKDNIEYGPMLKGEKN-------VDVEYYLSIV--GLNKEYATRDVKNLSGGEAQRVSIARTLANNP 150 (241)
T ss_pred EEEecCchhchhhHHHHHhcchhhcCcHH-------HHHHHHHHHc--CCCHHHhhCCcccCCHHHHHHHHHHHHHhcCC
Confidence 99999999999999999997642111110 1122344444 554 3455677899999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHHhcCCCChhHHH
Q 000789 533 KILLLDEATSALDAESERIVQDALVKIMT--SRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDELIKDPEGPYTQL 609 (1283)
Q Consensus 533 ~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~~~~~~~~~ 609 (1283)
++|||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++...+...|.+.
T Consensus 151 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~~~~~~~ 230 (241)
T PRK14250 151 EVLLLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNMEQAKRIGDYTAFLNKGILVEYAKTYDFFTNPQNEVTKL 230 (241)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHHhCCEEEEEeCCEEEEeCCHHHHhcCCCcHHHHH
Confidence 99999999999999999999999998753 7899999999999875 99999999999999999999986544445443
No 206
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.4e-42 Score=388.96 Aligned_cols=217 Identities=32% Similarity=0.544 Sum_probs=191.6
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHhcce
Q 000789 1039 AIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQM 1118 (1283)
Q Consensus 1039 ~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i 1118 (1283)
.|+++||+++|+.. ..++|+|+||+|++||.+||+|+||||||||+++|+|+++|++|+|.+||.++...+...+++.|
T Consensus 5 ~l~~~~l~~~~~~~-~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13635 5 IIRVEHISFRYPDA-ATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPEAGTITVGGMVLSEETVWDVRRQV 83 (279)
T ss_pred eEEEEEEEEEeCCC-CccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHhhhe
Confidence 48999999999743 34699999999999999999999999999999999999999999999999999888877888999
Q ss_pred EEEccCC--CCChhhHHHHHhcCCC-CCCCH----HHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHH
Q 000789 1119 GLVSQEP--VLFNETIRTNIAYGKQ-GGATE----EEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIA 1191 (1283)
Q Consensus 1119 ~~V~Qdp--~Lf~gTIreNl~~g~~-~~~sd----~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiA 1191 (1283)
+|+||+| .+++.|++|||.++.. ...+. +++.++++..++.+++...| ..||||||||++||
T Consensus 84 ~~~~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----------~~LS~G~~qrv~la 152 (279)
T PRK13635 84 GMVFQNPDNQFVGATVQDDVAFGLENIGVPREEMVERVDQALRQVGMEDFLNREP-----------HRLSGGQKQRVAIA 152 (279)
T ss_pred EEEEeCHHHhcccccHHHHHhhhHhhCCCCHHHHHHHHHHHHHHcCChhhhhCCc-----------ccCCHHHHHHHHHH
Confidence 9999998 5678899999987521 11232 34677777778877766554 37999999999999
Q ss_pred HHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchHHhhcCEEEEEeCCEEEEecChHHHHhc
Q 000789 1192 RAVLKNPKILLLDEATSALDAESERVVQDALERVMV--NRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALMKI 1267 (1283)
Q Consensus 1192 RAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~~D~I~vl~~G~Ive~Gt~~eLl~~ 1267 (1283)
|||+.+|+||||||||++||+.+...+.+.|+++.+ ++|+|+|||+++.+..||+|++|++|++++.|+++++.+.
T Consensus 153 ral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 230 (279)
T PRK13635 153 GVLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLDEAAQADRVIVMNKGEILEEGTPEEIFKS 230 (279)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHcCCEEEEEECCEEEEECCHHHHhcC
Confidence 999999999999999999999999999999998764 7899999999999988999999999999999999998763
No 207
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.8e-42 Score=385.39 Aligned_cols=221 Identities=31% Similarity=0.512 Sum_probs=190.0
Q ss_pred cccEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCC-----CCcceEEECCccCCC--C
Q 000789 1037 GGAIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYD-----PDSGHVLLDNIELPK--F 1109 (1283)
Q Consensus 1037 ~g~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~-----~~~G~I~idG~di~~--~ 1109 (1283)
.+.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.+||.++.. .
T Consensus 11 ~~~l~~~~l~~~~~~---~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~ 87 (260)
T PRK10744 11 PSKIQVRNLNFYYGK---FHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQ 87 (260)
T ss_pred CceEEEEEEEEEeCC---eEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEcccccc
Confidence 356999999999974 359999999999999999999999999999999999986 589999999999853 4
Q ss_pred ChHHHhcceEEEccCCCCChhhHHHHHhcCCC--CCCCH----HHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChh
Q 000789 1110 KLSWLRQQMGLVSQEPVLFNETIRTNIAYGKQ--GGATE----EEIIAATEASNAHNFISALPHGYETNVGERGVQLSGG 1183 (1283)
Q Consensus 1110 ~~~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~--~~~sd----~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgG 1183 (1283)
+...+|++++|+||++.+|+.|++||+.++.. ...+. +++.++++.+++.+.+. ........+||||
T Consensus 88 ~~~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G 160 (260)
T PRK10744 88 DIALLRAKVGMVFQKPTPFPMSIYDNIAFGVRLFEKLSRAEMDERVEWALTKAALWNEVK-------DKLHQSGYSLSGG 160 (260)
T ss_pred chHHHhcceEEEecCCccCcCcHHHHHhhhHhhcCCCCHHHHHHHHHHHHHHcCCChhhH-------HHHhcCCCCCCHH
Confidence 56678999999999999999999999986521 11222 44666777776643322 2344556689999
Q ss_pred HHHHHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcCCceEEEEecCchHHhh-cCEEEEEeCCEEEEecChH
Q 000789 1184 QKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHD 1262 (1283)
Q Consensus 1184 QrQRlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~ 1262 (1283)
||||++||||++++|+||||||||++||+.+.+.+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|+++
T Consensus 161 q~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 240 (260)
T PRK10744 161 QQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQDYTVVIVTHNMQQAARCSDYTAFMYLGELIEFGNTD 240 (260)
T ss_pred HHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999999998777899999999999865 9999999999999999999
Q ss_pred HHHhc
Q 000789 1263 ALMKI 1267 (1283)
Q Consensus 1263 eLl~~ 1267 (1283)
++...
T Consensus 241 ~~~~~ 245 (260)
T PRK10744 241 TIFTK 245 (260)
T ss_pred HHHhC
Confidence 99865
No 208
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=3.4e-42 Score=382.52 Aligned_cols=218 Identities=28% Similarity=0.474 Sum_probs=183.6
Q ss_pred EEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHH-hcce
Q 000789 1040 IELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWL-RQQM 1118 (1283)
Q Consensus 1040 I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~l-R~~i 1118 (1283)
|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++.+.+...+ |+.+
T Consensus 1 l~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (236)
T cd03219 1 LEVRGLTKRFGG---LVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPTSGSVLFDGEDITGLPPHEIARLGI 77 (236)
T ss_pred CeeeeeEEEECC---EEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEECCCCCHHHHHhcCE
Confidence 478999999973 359999999999999999999999999999999999999999999999999988776554 5789
Q ss_pred EEEccCCCCChh-hHHHHHhcCCCCC-C----------CHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHH
Q 000789 1119 GLVSQEPVLFNE-TIRTNIAYGKQGG-A----------TEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQ 1186 (1283)
Q Consensus 1119 ~~V~Qdp~Lf~g-TIreNl~~g~~~~-~----------sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQ 1186 (1283)
+||||++.+|.+ |++||+.++.... . ..++..+ .+.++++.+ |++.........|||||||
T Consensus 78 ~~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgG~~q 150 (236)
T cd03219 78 GRTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREARE-----RAEELLERV--GLADLADRPAGELSYGQQR 150 (236)
T ss_pred EEEecccccccCCCHHHHHHHHHhhccccccccccccccHHHHHH-----HHHHHHHHc--CccchhhCChhhCCHHHHH
Confidence 999999999876 9999998652110 0 1111111 123344443 4554455566789999999
Q ss_pred HHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHH
Q 000789 1187 RIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVM-VNRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDAL 1264 (1283)
Q Consensus 1187 RlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eL 1264 (1283)
|++||||++++|++|||||||++||+.+.+.+.+.|+++. +++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 151 rv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 230 (236)
T cd03219 151 RLEIARALATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMDVVMSLADRVTVLDQGRVIAEGTPDEV 230 (236)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEeecCHHHh
Confidence 9999999999999999999999999999999999999875 57899999999999976 999999999999999999998
Q ss_pred Hhc
Q 000789 1265 MKI 1267 (1283)
Q Consensus 1265 l~~ 1267 (1283)
...
T Consensus 231 ~~~ 233 (236)
T cd03219 231 RNN 233 (236)
T ss_pred ccC
Confidence 753
No 209
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=4.9e-42 Score=399.80 Aligned_cols=218 Identities=33% Similarity=0.561 Sum_probs=187.5
Q ss_pred ccEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHHhcc
Q 000789 373 GEIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWIREK 452 (1283)
Q Consensus 373 ~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~ 452 (1283)
..|+++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.+||.++.+.++. ++.
T Consensus 13 ~~L~l~~l~~~~~~---~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~--~r~ 87 (375)
T PRK09452 13 PLVELRGISKSFDG---KEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPDSGRIMLDGQDITHVPAE--NRH 87 (375)
T ss_pred ceEEEEEEEEEECC---eEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHH--HCC
Confidence 35999999999963 3589999999999999999999999999999999999999999999999999877654 468
Q ss_pred cEEEccCCCCCcc-cHHHHHhcCCCC--CCH----HHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHH
Q 000789 453 IGLVSQEPILFAT-SLRENIAYGKEN--ATD----QEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIA 525 (1283)
Q Consensus 453 i~~v~Q~~~l~~~-ti~~ni~~~~~~--~~~----~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiA 525 (1283)
||||+|++.+|+. ||+|||.|+... .+. +++.++++..+ ++......+.+|||||||||+||
T Consensus 88 ig~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~~~~~l~~~~-----------l~~~~~~~p~~LSgGq~QRVaLA 156 (375)
T PRK09452 88 VNTVFQSYALFPHMTVFENVAFGLRMQKTPAAEITPRVMEALRMVQ-----------LEEFAQRKPHQLSGGQQQRVAIA 156 (375)
T ss_pred EEEEecCcccCCCCCHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcC-----------CchhhhCChhhCCHHHHHHHHHH
Confidence 9999999999976 999999987531 122 23344444444 44444455579999999999999
Q ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHHhcCC
Q 000789 526 RAILKNPKILLLDEATSALDAESERIVQDALVKIMT--SRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDELIKDP 602 (1283)
Q Consensus 526 Ral~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~~ 602 (1283)
|||+.+|++||||||||+||+.++..+.+.|+++.+ +.|+|+|||+++.+.. ||+|++|++|+|++.|++++++.++
T Consensus 157 RaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~i~~~p 236 (375)
T PRK09452 157 RAVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPREIYEEP 236 (375)
T ss_pred HHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCc
Confidence 999999999999999999999999999999998764 6899999999999765 9999999999999999999998876
Q ss_pred CChh
Q 000789 603 EGPY 606 (1283)
Q Consensus 603 ~~~~ 606 (1283)
...|
T Consensus 237 ~~~~ 240 (375)
T PRK09452 237 KNLF 240 (375)
T ss_pred ccHH
Confidence 5444
No 210
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.2e-42 Score=387.46 Aligned_cols=218 Identities=31% Similarity=0.500 Sum_probs=190.8
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHhcce
Q 000789 1039 AIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQM 1118 (1283)
Q Consensus 1039 ~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i 1118 (1283)
-|+++||+++|+.....++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++.+.+...+|+.+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~i 83 (277)
T PRK13642 4 ILEVENLVFKYEKESDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEFEGKVKIDGELLTAENVWNLRRKI 83 (277)
T ss_pred eEEEEEEEEEcCCCCcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCCEEEECCEECCcCCHHHHhcce
Confidence 48999999999743334699999999999999999999999999999999999999999999999999887777889999
Q ss_pred EEEccCC--CCChhhHHHHHhcCCC-CCCCHH----HHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHH
Q 000789 1119 GLVSQEP--VLFNETIRTNIAYGKQ-GGATEE----EIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIA 1191 (1283)
Q Consensus 1119 ~~V~Qdp--~Lf~gTIreNl~~g~~-~~~sd~----ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiA 1191 (1283)
+||||+| .++..|+.|||.++.. ...+++ ++.++++.+++.++.... ...||||||||++||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrv~lA 152 (277)
T PRK13642 84 GMVFQNPDNQFVGATVEDDVAFGMENQGIPREEMIKRVDEALLAVNMLDFKTRE-----------PARLSGGQKQRVAVA 152 (277)
T ss_pred EEEEECHHHhhccCCHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHhHhhCC-----------cccCCHHHHHHHHHH
Confidence 9999998 4778899999986521 123333 345677777776654432 357999999999999
Q ss_pred HHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchHHhhcCEEEEEeCCEEEEecChHHHHhc
Q 000789 1192 RAVLKNPKILLLDEATSALDAESERVVQDALERVMV--NRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALMKI 1267 (1283)
Q Consensus 1192 RAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~~D~I~vl~~G~Ive~Gt~~eLl~~ 1267 (1283)
|||+++|+||||||||++||+.+.+.+.+.|+++.+ ++|+|+|||+++.+..||+|++|++|++++.|+++++++.
T Consensus 153 raL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 230 (277)
T PRK13642 153 GIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDEAASSDRILVMKAGEIIKEAAPSELFAT 230 (277)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 999999999999999999999999999999998754 7899999999999988999999999999999999998864
No 211
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.6e-42 Score=386.54 Aligned_cols=224 Identities=30% Similarity=0.472 Sum_probs=191.2
Q ss_pred cccEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCC-----CcceEEECCccCCC--C
Q 000789 1037 GGAIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDP-----DSGHVLLDNIELPK--F 1109 (1283)
Q Consensus 1037 ~g~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~-----~~G~I~idG~di~~--~ 1109 (1283)
.+.|+++||+++|++ .++|+|+||+|++||+++|+|+||||||||+++|.|+++| ++|+|++||.++.. .
T Consensus 17 ~~~l~~~nl~~~~~~---~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~ 93 (267)
T PRK14235 17 EIKMRARDVSVFYGE---KQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRL 93 (267)
T ss_pred CceEEEEeEEEEECC---EEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECccccc
Confidence 357999999999974 3599999999999999999999999999999999999975 89999999999864 3
Q ss_pred ChHHHhcceEEEccCCCCChhhHHHHHhcCCC-CCC--C----HHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCCh
Q 000789 1110 KLSWLRQQMGLVSQEPVLFNETIRTNIAYGKQ-GGA--T----EEEIIAATEASNAHNFISALPHGYETNVGERGVQLSG 1182 (1283)
Q Consensus 1110 ~~~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~-~~~--s----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSg 1182 (1283)
+...+|+.++||||+|.+|..|++||+.++.. .+. + ++++.++++.+++.+++. ......+.+|||
T Consensus 94 ~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSg 166 (267)
T PRK14235 94 DVVELRARVGMVFQKPNPFPKSIYENVAYGPRIHGLARSKAELDEIVETSLRKAGLWEEVK-------DRLHEPGTGLSG 166 (267)
T ss_pred chHHHhhceEEEecCCCCCCCcHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCchhhh-------HHhhCCcccCCH
Confidence 45678899999999999998999999986421 111 1 244667777777755432 123345568999
Q ss_pred hHHHHHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcCCceEEEEecCchHHhh-cCEEEEEeCCEEEEecCh
Q 000789 1183 GQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSH 1261 (1283)
Q Consensus 1183 GQrQRlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~ 1261 (1283)
|||||++|||||+.+|++|||||||++||+.+...+.+.|+++.+++|+|+|||+++.+.. ||++++|++|++++.|++
T Consensus 167 Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~~~tiiivtH~~~~~~~~~d~v~~l~~G~i~~~g~~ 246 (267)
T PRK14235 167 GQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQNYTIVIVTHSMQQAARVSQRTAFFHLGNLVEVGDT 246 (267)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhcCCeEEEEEcCHHHHHhhCCEEEEEECCEEEEeCCH
Confidence 9999999999999999999999999999999999999999988777899999999999965 999999999999999999
Q ss_pred HHHHhccCc
Q 000789 1262 DALMKITDG 1270 (1283)
Q Consensus 1262 ~eLl~~~~g 1270 (1283)
+++...+..
T Consensus 247 ~~~~~~~~~ 255 (267)
T PRK14235 247 EKMFTNPDD 255 (267)
T ss_pred HHHHhCCCC
Confidence 999864333
No 212
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=4.7e-42 Score=383.13 Aligned_cols=213 Identities=34% Similarity=0.534 Sum_probs=181.6
Q ss_pred EEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCCh---HHHhc
Q 000789 1040 IELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKL---SWLRQ 1116 (1283)
Q Consensus 1040 I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~---~~lR~ 1116 (1283)
|+++||+++|+. +.++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||.++...+. ..+|+
T Consensus 2 l~~~~l~~~~~~--~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (243)
T TIGR02315 2 LEVENLSKVYPN--GKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPSSGSILLEGTDITKLRGKKLRKLRR 79 (243)
T ss_pred eEEEeeeeecCC--CcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCccEEEECCEEhhhCCHHHHHHHHh
Confidence 789999999972 2359999999999999999999999999999999999999999999999999877653 44688
Q ss_pred ceEEEccCCCCCh-hhHHHHHhcCCCC-------------CCCHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCCh
Q 000789 1117 QMGLVSQEPVLFN-ETIRTNIAYGKQG-------------GATEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSG 1182 (1283)
Q Consensus 1117 ~i~~V~Qdp~Lf~-gTIreNl~~g~~~-------------~~sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSg 1182 (1283)
+++||||++.+|. .|++||+.++... ...++++.++++..++.++ ......+|||
T Consensus 80 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LSg 148 (243)
T TIGR02315 80 RIGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLADK-----------AYQRADQLSG 148 (243)
T ss_pred heEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcHhh-----------hcCCcccCCH
Confidence 9999999998886 6999999865211 0112345555555555443 3334568999
Q ss_pred hHHHHHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchHHhh-cCEEEEEeCCEEEEec
Q 000789 1183 GQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMV--NRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQG 1259 (1283)
Q Consensus 1183 GQrQRlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~G 1259 (1283)
|||||++|||||+++|++|||||||++||+++.+.+.+.|+++.+ ++|+|+|||+++.+.. ||++++|++|++++.|
T Consensus 149 G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~ 228 (243)
T TIGR02315 149 GQQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVDLAKKYADRIVGLKAGEIVFDG 228 (243)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 999999999999999999999999999999999999999998753 7899999999999865 9999999999999999
Q ss_pred ChHHHH
Q 000789 1260 SHDALM 1265 (1283)
Q Consensus 1260 t~~eLl 1265 (1283)
+++++.
T Consensus 229 ~~~~~~ 234 (243)
T TIGR02315 229 APSELD 234 (243)
T ss_pred CHHHhC
Confidence 999874
No 213
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.9e-42 Score=368.56 Aligned_cols=218 Identities=31% Similarity=0.492 Sum_probs=190.3
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCc---cCCCCChHHHh
Q 000789 1039 AIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNI---ELPKFKLSWLR 1115 (1283)
Q Consensus 1039 ~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~---di~~~~~~~lR 1115 (1283)
.|+++|++..|+. .++++|||++|+.||.+|+.||||||||||+++|+|+..|++|+|.+||. |.++.+ .-.
T Consensus 2 ~i~i~~~~~~~~~---~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~~G~I~~~~~~l~D~~~~~--~~~ 76 (345)
T COG1118 2 SIRINNVKKRFGA---FGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPDAGRIRLNGRVLFDVSNLA--VRD 76 (345)
T ss_pred ceeehhhhhhccc---ccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCCCceEEECCEeccchhccc--hhh
Confidence 4788999999974 46899999999999999999999999999999999999999999999999 766633 334
Q ss_pred cceEEEccCCCCC-hhhHHHHHhcCCCC---CC----CHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHH
Q 000789 1116 QQMGLVSQEPVLF-NETIRTNIAYGKQG---GA----TEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQR 1187 (1283)
Q Consensus 1116 ~~i~~V~Qdp~Lf-~gTIreNl~~g~~~---~~----sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQR 1187 (1283)
++||+|+|+..|| +.||++||+||..- .. ...++.+.++.+++.++-+..|. +||||||||
T Consensus 77 R~VGfvFQ~YALF~HmtVa~NIAFGl~~~~~~p~~~~~r~rv~elL~lvqL~~la~ryP~-----------QLSGGQrQR 145 (345)
T COG1118 77 RKVGFVFQHYALFPHMTVADNIAFGLKVRKERPSEAEIRARVEELLRLVQLEGLADRYPA-----------QLSGGQRQR 145 (345)
T ss_pred cceeEEEechhhcccchHHhhhhhcccccccCCChhhHHHHHHHHHHHhcccchhhcCch-----------hcChHHHHH
Confidence 7899999999988 67999999999521 12 23456667788888777666663 899999999
Q ss_pred HHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHH
Q 000789 1188 IAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMV--NRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDAL 1264 (1283)
Q Consensus 1188 laiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eL 1264 (1283)
+||||||..+|++|+||||.++||++-.+.+.+.|++... ++|+++|||+.+.+.. ||||+||++|+|.+.|+|+|.
T Consensus 146 VALARALA~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~eea~~ladrvvvl~~G~Ieqvg~p~ev 225 (345)
T COG1118 146 VALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQEEALELADRVVVLNQGRIEQVGPPDEV 225 (345)
T ss_pred HHHHHHhhcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHHHHHhhcceEEEecCCeeeeeCCHHHH
Confidence 9999999999999999999999999999999999998753 7899999999988765 999999999999999999999
Q ss_pred HhccCchh
Q 000789 1265 MKITDGAY 1272 (1283)
Q Consensus 1265 l~~~~g~y 1272 (1283)
...+++.|
T Consensus 226 ~~~P~s~f 233 (345)
T COG1118 226 YDHPASRF 233 (345)
T ss_pred hcCCCccc
Confidence 88766654
No 214
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=6.1e-42 Score=394.50 Aligned_cols=226 Identities=27% Similarity=0.354 Sum_probs=189.2
Q ss_pred cEEEEEEEEECCCCC----------CcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCC
Q 000789 1039 AIELRCVSFKYPTRP----------DVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPK 1108 (1283)
Q Consensus 1039 ~I~~~nVsf~Y~~~~----------~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~ 1108 (1283)
-|+++|++++|+.+. ...+++||||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++.+
T Consensus 8 ~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~~G~I~~~G~~i~~ 87 (331)
T PRK15079 8 LLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGEVAWLGKDLLG 87 (331)
T ss_pred eEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCCcEEEECCEECCc
Confidence 589999999997421 2469999999999999999999999999999999999999999999999999988
Q ss_pred CChH---HHhcceEEEccCC--CCC-hhhHHHHHhcCC---CCCCCHHH----HHHHHHHhChHHHHHhCCCCcccccCC
Q 000789 1109 FKLS---WLRQQMGLVSQEP--VLF-NETIRTNIAYGK---QGGATEEE----IIAATEASNAHNFISALPHGYETNVGE 1175 (1283)
Q Consensus 1109 ~~~~---~lR~~i~~V~Qdp--~Lf-~gTIreNl~~g~---~~~~sd~e----i~~al~~a~l~~~I~~lp~Gldt~vge 1175 (1283)
++.. .+|++|+||+|+| .|+ ..||.|||.++. ....+.++ +.++++.+++.+ .....
T Consensus 88 ~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~~~~~~~~~~~~~~~~l~~vgl~~----------~~~~~ 157 (331)
T PRK15079 88 MKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKLSRQEVKDRVKAMMLKVGLLP----------NLINR 157 (331)
T ss_pred CCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCCh----------HHhcC
Confidence 8754 3678999999999 466 579999996431 11234333 344555555521 11233
Q ss_pred CCCCCChhHHHHHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchHHhh-cCEEEEEeC
Q 000789 1176 RGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMV--NRTTVVVAHRLTTIKN-ADIIAVVKN 1252 (1283)
Q Consensus 1176 ~G~~LSgGQrQRlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~D~I~vl~~ 1252 (1283)
...+||||||||++|||||+.+|++||+||||++||+.+...|.+.|+++.+ +.|+|+|||+++.+.. ||+|+||++
T Consensus 158 ~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~~~~~~~dri~vl~~ 237 (331)
T PRK15079 158 YPHEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLAVVKHISDRVLVMYL 237 (331)
T ss_pred CcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 3458999999999999999999999999999999999999999999998754 7899999999999986 999999999
Q ss_pred CEEEEecChHHHHhccCchhHH
Q 000789 1253 GVIAEQGSHDALMKITDGAYAS 1274 (1283)
Q Consensus 1253 G~Ive~Gt~~eLl~~~~g~y~~ 1274 (1283)
|+|+|.|+++++++++...|.+
T Consensus 238 G~ive~g~~~~i~~~~~~py~~ 259 (331)
T PRK15079 238 GHAVELGTYDEVYHNPLHPYTK 259 (331)
T ss_pred CEEEEEcCHHHHHcCCCCHHHH
Confidence 9999999999999865666755
No 215
>cd03291 ABCC_CFTR1 The CFTR subfamily domain 1. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits, or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=3.3e-41 Score=379.68 Aligned_cols=222 Identities=27% Similarity=0.447 Sum_probs=197.1
Q ss_pred CCCcccEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHH
Q 000789 1034 SSVGGAIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSW 1113 (1283)
Q Consensus 1034 ~~~~g~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~ 1113 (1283)
+...+.|+++|+++.. .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||
T Consensus 34 ~~~~~~l~i~nls~~~-----~~vL~~vs~~i~~Ge~~~liG~NGsGKSTLl~~I~Gl~~p~~G~I~i~g---------- 98 (282)
T cd03291 34 SSDDNNLFFSNLCLVG-----APVLKNINLKIEKGEMLAITGSTGSGKTSLLMLILGELEPSEGKIKHSG---------- 98 (282)
T ss_pred CCCCCeEEEEEEEEec-----ccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECC----------
Confidence 3345579999999952 3599999999999999999999999999999999999999999999998
Q ss_pred HhcceEEEccCCCCChhhHHHHHhcCCCCCCCHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHHHH
Q 000789 1114 LRQQMGLVSQEPVLFNETIRTNIAYGKQGGATEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARA 1193 (1283)
Q Consensus 1114 lR~~i~~V~Qdp~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiARA 1193 (1283)
.++|+||++.+|+.|++||+.++.. ..+.++.++++.+++.+.+..+|.++++.+++.+.+||||||||++||||
T Consensus 99 ---~i~yv~q~~~l~~~tv~enl~~~~~--~~~~~~~~~l~~~~l~~~l~~~~~~~~~~~~~~~~~LSgGq~qrv~lAra 173 (282)
T cd03291 99 ---RISFSSQFSWIMPGTIKENIIFGVS--YDEYRYKSVVKACQLEEDITKFPEKDNTVLGEGGITLSGGQRARISLARA 173 (282)
T ss_pred ---EEEEEeCcccccccCHHHHhhcccc--cCHHHHHHHHHHhCCHHHHHhccccccceecCCCCcCCHHHHHHHHHHHH
Confidence 3999999999999999999987522 34456677788889999999999999999999999999999999999999
Q ss_pred HccCCCEEEEecccCCCCHHHHHHHHHHH-HHHcCCceEEEEecCchHHhhcCEEEEEeCCEEEEecChHHHHhccCchh
Q 000789 1194 VLKNPKILLLDEATSALDAESERVVQDAL-ERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALMKITDGAY 1272 (1283)
Q Consensus 1194 ll~~p~ILiLDEaTSaLD~~te~~I~~~L-~~~~~~~TvI~IaHrl~ti~~~D~I~vl~~G~Ive~Gt~~eLl~~~~g~y 1272 (1283)
|+++|+||||||||++||+++...+.+.+ +...+++|+|+|||+++.+..||++++|++|++++.|+++++.+. ...|
T Consensus 174 L~~~p~iLiLDEPt~gLD~~~~~~l~~~ll~~~~~~~tIiiisH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~-~~~~ 252 (282)
T cd03291 174 VYKDADLYLLDSPFGYLDVFTEKEIFESCVCKLMANKTRILVTSKMEHLKKADKILILHEGSSYFYGTFSELQSL-RPDF 252 (282)
T ss_pred HhcCCCEEEEECCCccCCHHHHHHHHHHHHHHhhCCCEEEEEeCChHHHHhCCEEEEEECCEEEEECCHHHHHhc-chHH
Confidence 99999999999999999999999888754 555568899999999999988999999999999999999999874 4455
Q ss_pred HHHH
Q 000789 1273 ASLV 1276 (1283)
Q Consensus 1273 ~~L~ 1276 (1283)
.+.+
T Consensus 253 ~~~~ 256 (282)
T cd03291 253 SSKL 256 (282)
T ss_pred HHHH
Confidence 5443
No 216
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=4.3e-42 Score=399.01 Aligned_cols=219 Identities=30% Similarity=0.490 Sum_probs=190.1
Q ss_pred ccEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCc--ceEEECCccCCCCChHHHh
Q 000789 1038 GAIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDS--GHVLLDNIELPKFKLSWLR 1115 (1283)
Q Consensus 1038 g~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~--G~I~idG~di~~~~~~~lR 1115 (1283)
+.|+++||+++|++ ..+|+|+||+|++||.++|+||||||||||+++|.|+++|++ |+|.+||.++.+.+. .+
T Consensus 4 ~~l~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~~~~G~i~~~g~~~~~~~~--~~ 78 (362)
T TIGR03258 4 GGIRIDHLRVAYGA---NTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAAGLTGRIAIADRDLTHAPP--HK 78 (362)
T ss_pred eEEEEEEEEEEECC---eEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCEEEEECCEECCCCCH--HH
Confidence 56999999999974 359999999999999999999999999999999999999999 999999999987664 46
Q ss_pred cceEEEccCCCCChh-hHHHHHhcCCC-CCCCH----HHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHH
Q 000789 1116 QQMGLVSQEPVLFNE-TIRTNIAYGKQ-GGATE----EEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIA 1189 (1283)
Q Consensus 1116 ~~i~~V~Qdp~Lf~g-TIreNl~~g~~-~~~sd----~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRla 1189 (1283)
+.|+||+|++.+|.. |++|||.|+.. ...+. +++.++++..++.++..+.| .+||||||||+|
T Consensus 79 r~ig~vfQ~~~l~p~~tv~enl~~~l~~~~~~~~~~~~~v~~~l~~~gL~~~~~~~~-----------~~LSgGq~QRva 147 (362)
T TIGR03258 79 RGLALLFQNYALFPHLKVEDNVAFGLRAQKMPKADIAERVADALKLVGLGDAAAHLP-----------AQLSGGMQQRIA 147 (362)
T ss_pred CCEEEEECCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCchhhCCh-----------hhCCHHHHHHHH
Confidence 789999999999954 99999987532 12332 34566677777766655544 489999999999
Q ss_pred HHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcC---CceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHHH
Q 000789 1190 IARAVLKNPKILLLDEATSALDAESERVVQDALERVMV---NRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDALM 1265 (1283)
Q Consensus 1190 iARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~---~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl 1265 (1283)
|||||+++|++||||||||+||+.+...+.+.|+++.+ +.|+|+|||+++.+.. ||+|+||++|++++.|+++|+.
T Consensus 148 LARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G~i~~~g~~~~~~ 227 (362)
T TIGR03258 148 IARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDGRLAAHGEPQALY 227 (362)
T ss_pred HHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 99999999999999999999999999999999988754 6899999999998765 9999999999999999999999
Q ss_pred hccCchh
Q 000789 1266 KITDGAY 1272 (1283)
Q Consensus 1266 ~~~~g~y 1272 (1283)
+++...|
T Consensus 228 ~~p~~~~ 234 (362)
T TIGR03258 228 DAPADGF 234 (362)
T ss_pred hCcCcHH
Confidence 8755444
No 217
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.9e-42 Score=382.96 Aligned_cols=225 Identities=29% Similarity=0.480 Sum_probs=187.6
Q ss_pred ccEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCC-----CCceEEECCcccCC--CC
Q 000789 373 GEIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDP-----DAGEVLIDGIDIKK--LQ 445 (1283)
Q Consensus 373 ~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~~--~~ 445 (1283)
..|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|+++.. .+
T Consensus 6 ~~l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~ 82 (254)
T PRK14273 6 AIIETENLNLFYTD---FKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFD 82 (254)
T ss_pred ceEEEeeeEEEeCC---ceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEeccccccc
Confidence 35999999999963 3599999999999999999999999999999999999997 48999999998853 34
Q ss_pred HHHHhcccEEEccCCCCCcccHHHHHhcCCCC---CC----HHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHH
Q 000789 446 LKWIREKIGLVSQEPILFATSLRENIAYGKEN---AT----DQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQ 518 (1283)
Q Consensus 446 ~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~---~~----~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGq 518 (1283)
...+|++|+|++|++.+|+.|++|||.++... .. ++.+.++++.+++.+.+ .......+.+|||||
T Consensus 83 ~~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-------~~~~~~~~~~LSgG~ 155 (254)
T PRK14273 83 ILELRRKIGMVFQTPNPFLMSIYDNISYGPKIHGTKDKKKLDEIVEQSLKKSALWNEV-------KDKLNTNALSLSGGQ 155 (254)
T ss_pred HHHHhhceEEEeeccccccCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCchhh-------HHHHhCCcccCCHHH
Confidence 45678899999999999989999999986321 11 12233444444332211 223345678999999
Q ss_pred HHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhH
Q 000789 519 KQRIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMTSRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDE 597 (1283)
Q Consensus 519 kqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~ 597 (1283)
|||++|||||+++|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|++++
T Consensus 156 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 235 (254)
T PRK14273 156 QQRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLKESYTIIIVTHNMQQAGRISDRTAFFLNGCIEEESSTDE 235 (254)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999998777899999999999865 99999999999999999999
Q ss_pred HhcCCCChhH
Q 000789 598 LIKDPEGPYT 607 (1283)
Q Consensus 598 l~~~~~~~~~ 607 (1283)
+..++...|.
T Consensus 236 ~~~~~~~~~~ 245 (254)
T PRK14273 236 LFFNPKNTKT 245 (254)
T ss_pred HHhCCCChHH
Confidence 9876444443
No 218
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.8e-42 Score=379.67 Aligned_cols=217 Identities=35% Similarity=0.538 Sum_probs=184.9
Q ss_pred EEEEEEEEECCCCC-CcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChH---HHh
Q 000789 1040 IELRCVSFKYPTRP-DVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLS---WLR 1115 (1283)
Q Consensus 1040 I~~~nVsf~Y~~~~-~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~---~lR 1115 (1283)
|+++|++++|+++. ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||.++...+.. .+|
T Consensus 2 i~~~~l~~~~~~~~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (233)
T cd03258 2 IELKNVSKVFGDTGGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPTSGSVLVDGTDLTLLSGKELRKAR 81 (233)
T ss_pred eEEecceEEccCCCCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHH
Confidence 78999999997431 12699999999999999999999999999999999999999999999999999876543 357
Q ss_pred cceEEEccCCCCCh-hhHHHHHhcCCC-CCCC----HHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHH
Q 000789 1116 QQMGLVSQEPVLFN-ETIRTNIAYGKQ-GGAT----EEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIA 1189 (1283)
Q Consensus 1116 ~~i~~V~Qdp~Lf~-gTIreNl~~g~~-~~~s----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRla 1189 (1283)
+.++|+||++.+|. .|++||+.++.. ...+ .+++.++++..++.+.... ...+||||||||++
T Consensus 82 ~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv~ 150 (233)
T cd03258 82 RRIGMIFQHFNLLSSRTVFENVALPLEIAGVPKAEIEERVLELLELVGLEDKADA-----------YPAQLSGGQKQRVG 150 (233)
T ss_pred hheEEEccCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChhhhhc-----------ChhhCCHHHHHHHH
Confidence 89999999999996 699999976411 1122 3345666666666554433 33589999999999
Q ss_pred HHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHHHh
Q 000789 1190 IARAVLKNPKILLLDEATSALDAESERVVQDALERVMV--NRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDALMK 1266 (1283)
Q Consensus 1190 iARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl~ 1266 (1283)
||||++++|++|||||||++||+.+...+.+.|+++.+ ++|+|+|||+++.+.. ||++++|++|++++.|+++++.+
T Consensus 151 la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 230 (233)
T cd03258 151 IARALANNPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEMEVVKRICDRVAVMEKGEVVEEGTVEEVFA 230 (233)
T ss_pred HHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhc
Confidence 99999999999999999999999999999999998753 7899999999999876 99999999999999999999875
Q ss_pred c
Q 000789 1267 I 1267 (1283)
Q Consensus 1267 ~ 1267 (1283)
.
T Consensus 231 ~ 231 (233)
T cd03258 231 N 231 (233)
T ss_pred C
Confidence 3
No 219
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.2e-42 Score=384.83 Aligned_cols=226 Identities=28% Similarity=0.413 Sum_probs=189.4
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCC-----CcceEEECCccCC--CCCh
Q 000789 1039 AIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDP-----DSGHVLLDNIELP--KFKL 1111 (1283)
Q Consensus 1039 ~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~-----~~G~I~idG~di~--~~~~ 1111 (1283)
.|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++. +.+.
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 80 (253)
T PRK14267 4 AIETVNLRVYYGS---NHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDP 80 (253)
T ss_pred eEEEEeEEEEeCC---eeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccCh
Confidence 4899999999974 3599999999999999999999999999999999999987 4999999999987 4556
Q ss_pred HHHhcceEEEccCCCCChh-hHHHHHhcCCC-CC--CC----HHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChh
Q 000789 1112 SWLRQQMGLVSQEPVLFNE-TIRTNIAYGKQ-GG--AT----EEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGG 1183 (1283)
Q Consensus 1112 ~~lR~~i~~V~Qdp~Lf~g-TIreNl~~g~~-~~--~s----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgG 1183 (1283)
..+|++++|+||++.+|.. |++||+.++.. .. .+ ++++.++++..++.+.+. ........+||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G 153 (253)
T PRK14267 81 IEVRREVGMVFQYPNPFPHLTIYDNVAIGVKLNGLVKSKKELDERVEWALKKAALWDEVK-------DRLNDYPSNLSGG 153 (253)
T ss_pred HHHhhceeEEecCCccCCCCcHHHHHHHHHHhcCccCCHHHHHHHHHHHHHHcCCccchh-------hhhccChhhCCHH
Confidence 6788999999999999975 99999986421 11 11 234556666666543332 1233455689999
Q ss_pred HHHHHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcCCceEEEEecCchHHhh-cCEEEEEeCCEEEEecChH
Q 000789 1184 QKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHD 1262 (1283)
Q Consensus 1184 QrQRlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~ 1262 (1283)
||||++||||++++|++|||||||++||+.+.+.+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|+++
T Consensus 154 ~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~ 233 (253)
T PRK14267 154 QRQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKKEYTIVLVTHSPAQAARVSDYVAFLYLGKLIEVGPTR 233 (253)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999999998777999999999999866 9999999999999999999
Q ss_pred HHHhccCchhHH
Q 000789 1263 ALMKITDGAYAS 1274 (1283)
Q Consensus 1263 eLl~~~~g~y~~ 1274 (1283)
++.+.+...|.+
T Consensus 234 ~~~~~~~~~~~~ 245 (253)
T PRK14267 234 KVFENPEHELTE 245 (253)
T ss_pred HHHhCCCcHHHH
Confidence 998653333433
No 220
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=6.7e-42 Score=397.12 Aligned_cols=221 Identities=33% Similarity=0.551 Sum_probs=187.7
Q ss_pred cEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHHhccc
Q 000789 374 EIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWIREKI 453 (1283)
Q Consensus 374 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 453 (1283)
.|+++|++++|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|++||+++...+. .+++|
T Consensus 2 ~L~i~~l~~~~~~---~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~i 76 (353)
T PRK10851 2 SIEIANIKKSFGR---TQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDVSRLHA--RDRKV 76 (353)
T ss_pred EEEEEEEEEEeCC---eEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCH--HHCCE
Confidence 3789999999963 359999999999999999999999999999999999999999999999999977654 35789
Q ss_pred EEEccCCCCCcc-cHHHHHhcCCCC------CCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHH
Q 000789 454 GLVSQEPILFAT-SLRENIAYGKEN------ATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIAR 526 (1283)
Q Consensus 454 ~~v~Q~~~l~~~-ti~~ni~~~~~~------~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiAR 526 (1283)
+||+|++.+|+. |++||+.|+... .+.++..+ .+.+.++.+ |++......+.+||||||||++|||
T Consensus 77 ~~v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~L~~~~~~~~~~LSgGq~QRvalAr 149 (353)
T PRK10851 77 GFVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKA-----KVTQLLEMV--QLAHLADRYPAQLSGGQKQRVALAR 149 (353)
T ss_pred EEEecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHH-----HHHHHHHHc--CCchhhhCChhhCCHHHHHHHHHHH
Confidence 999999999975 999999987431 12222111 122334444 5555556667899999999999999
Q ss_pred HHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHHhcCCC
Q 000789 527 AILKNPKILLLDEATSALDAESERIVQDALVKIMT--SRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDELIKDPE 603 (1283)
Q Consensus 527 al~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~~~ 603 (1283)
||+.+|++||||||||+||+.++..+.+.|+++.+ +.|+|+|||+++.+.. ||+|++|++|+|++.|+++++..++.
T Consensus 150 AL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~ea~~~~Dri~vl~~G~i~~~g~~~~i~~~p~ 229 (353)
T PRK10851 150 ALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEAMEVADRVVVMSQGNIEQAGTPDQVWREPA 229 (353)
T ss_pred HHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCcc
Confidence 99999999999999999999999999999998864 6899999999999866 99999999999999999999987754
Q ss_pred Chh
Q 000789 604 GPY 606 (1283)
Q Consensus 604 ~~~ 606 (1283)
..|
T Consensus 230 ~~~ 232 (353)
T PRK10851 230 TRF 232 (353)
T ss_pred chH
Confidence 444
No 221
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8e-42 Score=388.61 Aligned_cols=220 Identities=33% Similarity=0.553 Sum_probs=188.6
Q ss_pred EEEEEEEEECCCCC--CCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCC----CHHH
Q 000789 375 IELRDVYFRYPARP--EVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKL----QLKW 448 (1283)
Q Consensus 375 i~~~~v~f~y~~~~--~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~----~~~~ 448 (1283)
|+++||+|+|++.. ..++|+||||+|++||+++|+||||||||||+++|+|+++|++|+|.+||+++... +...
T Consensus 3 l~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (286)
T PRK13646 3 IRFDNVSYTYQKGTPYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYIRP 82 (286)
T ss_pred EEEEEEEEEECCCCccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 78999999996422 13699999999999999999999999999999999999999999999999998653 3456
Q ss_pred HhcccEEEccCC--CCCcccHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHHhCCCCccc-cccCCCCCCChHHHHHHH
Q 000789 449 IREKIGLVSQEP--ILFATSLRENIAYGKEN--ATDQEIRTAIELANAAKFIDKLPKGLDT-MAGEHGTQLSGGQKQRIA 523 (1283)
Q Consensus 449 ~r~~i~~v~Q~~--~l~~~ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~lp~g~~t-~~~~~g~~LSgGqkqria 523 (1283)
+|++||||||+| .+|+.|+.|||.++... .+.++..+ .+.+.++.+ |+++ .....+.+||||||||++
T Consensus 83 ~~~~ig~v~q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~-----~~~~~l~~~--gL~~~~~~~~~~~LSgGq~qrv~ 155 (286)
T PRK13646 83 VRKRIGMVFQFPESQLFEDTVEREIIFGPKNFKMNLDEVKN-----YAHRLLMDL--GFSRDVMSQSPFQMSGGQMRKIA 155 (286)
T ss_pred HHhheEEEecChHhccchhhHHHHHHhhHHHcCCCHHHHHH-----HHHHHHHHc--CCChhhhhCCcccCCHHHHHHHH
Confidence 788999999997 68888999999986422 23333322 123456665 7874 567788999999999999
Q ss_pred HHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc--CCCeEEEEecCchhhh-ccCEEEEEeCCEEeEecChhHHhc
Q 000789 524 IARAILKNPKILLLDEATSALDAESERIVQDALVKIM--TSRTTVVVAHRLTTIR-NADLIAVVHQGKIVEKGTHDELIK 600 (1283)
Q Consensus 524 iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~-~~d~i~vl~~G~i~~~g~~~~l~~ 600 (1283)
|||||+.+|+||||||||++||+.+...+.+.|+++. .++|+|+|||+++.+. .||+|++|++|+|++.|+++++.+
T Consensus 156 laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~ 235 (286)
T PRK13646 156 IVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMNEVARYADEVIVMKEGSIVSQTSPKELFK 235 (286)
T ss_pred HHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 9999999999999999999999999999999999875 3789999999999986 499999999999999999999876
Q ss_pred C
Q 000789 601 D 601 (1283)
Q Consensus 601 ~ 601 (1283)
.
T Consensus 236 ~ 236 (286)
T PRK13646 236 D 236 (286)
T ss_pred C
Confidence 4
No 222
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=6.1e-42 Score=397.73 Aligned_cols=223 Identities=29% Similarity=0.481 Sum_probs=190.2
Q ss_pred cccEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCC--ceEEECCcccCCCCHHHH
Q 000789 372 EGEIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDA--GEVLIDGIDIKKLQLKWI 449 (1283)
Q Consensus 372 ~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~--G~i~~~g~~~~~~~~~~~ 449 (1283)
.+.|+++||+++|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+++|++ |+|.++|.++.+.++ .
T Consensus 3 ~~~l~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~~~~G~i~~~g~~~~~~~~--~ 77 (362)
T TIGR03258 3 CGGIRIDHLRVAYGA---NTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAAGLTGRIAIADRDLTHAPP--H 77 (362)
T ss_pred ceEEEEEEEEEEECC---eEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCEEEEECCEECCCCCH--H
Confidence 357999999999963 359999999999999999999999999999999999999999 999999999977665 3
Q ss_pred hcccEEEccCCCCCcc-cHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHH
Q 000789 450 REKIGLVSQEPILFAT-SLRENIAYGKEN--ATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIAR 526 (1283)
Q Consensus 450 r~~i~~v~Q~~~l~~~-ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiAR 526 (1283)
++.||||+|++.+|+. ||+|||.|+... .+.++..+ .+.+.++.+ |++........+||||||||++|||
T Consensus 78 ~r~ig~vfQ~~~l~p~~tv~enl~~~l~~~~~~~~~~~~-----~v~~~l~~~--gL~~~~~~~~~~LSgGq~QRvaLAR 150 (362)
T TIGR03258 78 KRGLALLFQNYALFPHLKVEDNVAFGLRAQKMPKADIAE-----RVADALKLV--GLGDAAAHLPAQLSGGMQQRIAIAR 150 (362)
T ss_pred HCCEEEEECCcccCCCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHhc--CCCchhhCChhhCCHHHHHHHHHHH
Confidence 5789999999999976 999999986431 22222221 122344444 6666666777899999999999999
Q ss_pred HHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC---CCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHHhcCC
Q 000789 527 AILKNPKILLLDEATSALDAESERIVQDALVKIMT---SRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDELIKDP 602 (1283)
Q Consensus 527 al~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~---~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~~ 602 (1283)
||+.+|++||||||||+||+.+...+.+.|+++.+ +.|+|+|||+++.+.. ||+|++|++|++++.|+++++..++
T Consensus 151 AL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G~i~~~g~~~~~~~~p 230 (362)
T TIGR03258 151 AIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDGRLAAHGEPQALYDAP 230 (362)
T ss_pred HHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCc
Confidence 99999999999999999999999999999998754 6799999999999865 9999999999999999999998875
Q ss_pred CChh
Q 000789 603 EGPY 606 (1283)
Q Consensus 603 ~~~~ 606 (1283)
...|
T Consensus 231 ~~~~ 234 (362)
T TIGR03258 231 ADGF 234 (362)
T ss_pred CcHH
Confidence 4443
No 223
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=5.2e-42 Score=399.63 Aligned_cols=218 Identities=34% Similarity=0.532 Sum_probs=192.1
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHhcce
Q 000789 1039 AIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQM 1118 (1283)
Q Consensus 1039 ~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i 1118 (1283)
.|+++|++++|++ .++|+|+||+|++||.++|+||||||||||+++|+|+++|++|+|.+||.++.+.+.. ++.+
T Consensus 14 ~L~l~~l~~~~~~---~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~--~r~i 88 (375)
T PRK09452 14 LVELRGISKSFDG---KEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPDSGRIMLDGQDITHVPAE--NRHV 88 (375)
T ss_pred eEEEEEEEEEECC---eEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 5999999999974 3589999999999999999999999999999999999999999999999999876654 5789
Q ss_pred EEEccCCCCCh-hhHHHHHhcCCC-CCCC----HHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHHH
Q 000789 1119 GLVSQEPVLFN-ETIRTNIAYGKQ-GGAT----EEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIAR 1192 (1283)
Q Consensus 1119 ~~V~Qdp~Lf~-gTIreNl~~g~~-~~~s----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiAR 1192 (1283)
+||+|++.+|. .||+|||.|+.. ...+ ++++.++++..++.++..+.| .+||||||||+||||
T Consensus 89 g~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~p-----------~~LSgGq~QRVaLAR 157 (375)
T PRK09452 89 NTVFQSYALFPHMTVFENVAFGLRMQKTPAAEITPRVMEALRMVQLEEFAQRKP-----------HQLSGGQQQRVAIAR 157 (375)
T ss_pred EEEecCcccCCCCCHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchhhhCCh-----------hhCCHHHHHHHHHHH
Confidence 99999999995 599999998632 1223 235667788888877776665 379999999999999
Q ss_pred HHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHHHhccC
Q 000789 1193 AVLKNPKILLLDEATSALDAESERVVQDALERVMV--NRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDALMKITD 1269 (1283)
Q Consensus 1193 All~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl~~~~ 1269 (1283)
||+++|++||||||||+||+.+...+.+.|+++.+ +.|+|+|||+++.+.. ||+|++|++|+|++.|+++++.+++.
T Consensus 158 aL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~i~~~p~ 237 (375)
T PRK09452 158 AVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPREIYEEPK 237 (375)
T ss_pred HHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCcc
Confidence 99999999999999999999999999999998764 7899999999998765 99999999999999999999998765
Q ss_pred chh
Q 000789 1270 GAY 1272 (1283)
Q Consensus 1270 g~y 1272 (1283)
..|
T Consensus 238 ~~~ 240 (375)
T PRK09452 238 NLF 240 (375)
T ss_pred cHH
Confidence 544
No 224
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.7e-42 Score=375.81 Aligned_cols=204 Identities=35% Similarity=0.554 Sum_probs=174.4
Q ss_pred EEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHhcceE
Q 000789 1040 IELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMG 1119 (1283)
Q Consensus 1040 I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~ 1119 (1283)
|+++||+++|++ .++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.+||.++.+.+ ..+++++
T Consensus 1 l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~--~~~~~i~ 75 (213)
T cd03259 1 LELKGLSKTYGS---VRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPDSGEILIDGRDVTGVP--PERRNIG 75 (213)
T ss_pred CeeeeeEEEeCC---eeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcCcCc--hhhccEE
Confidence 578999999974 35999999999999999999999999999999999999999999999999987654 3577899
Q ss_pred EEccCCCCCh-hhHHHHHhcCCC-CCCC----HHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHHHH
Q 000789 1120 LVSQEPVLFN-ETIRTNIAYGKQ-GGAT----EEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARA 1193 (1283)
Q Consensus 1120 ~V~Qdp~Lf~-gTIreNl~~g~~-~~~s----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiARA 1193 (1283)
||||+|.+|. .|++||+.++.. ...+ ++++.++++..++.++.... ..+||||||||++||||
T Consensus 76 ~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LSgG~~qrl~la~a 144 (213)
T cd03259 76 MVFQDYALFPHLTVAENIAFGLKLRGVPKAEIRARVRELLELVGLEGLLNRY-----------PHELSGGQQQRVALARA 144 (213)
T ss_pred EEcCchhhccCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCChhhhhcC-----------hhhCCHHHHHHHHHHHH
Confidence 9999998885 699999976421 1112 23455666666665544333 35899999999999999
Q ss_pred HccCCCEEEEecccCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchHHhh-cCEEEEEeCCEEEEec
Q 000789 1194 VLKNPKILLLDEATSALDAESERVVQDALERVMV--NRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQG 1259 (1283)
Q Consensus 1194 ll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~G 1259 (1283)
|+++|++|||||||++||+++.+.+.+.|+++.+ ++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 145 l~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~g 213 (213)
T cd03259 145 LAREPSLLLLDEPLSALDAKLREELREELKELQRELGITTIYVTHDQEEALALADRIAVMNEGRIVQVG 213 (213)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 9999999999999999999999999999998753 7899999999998866 9999999999998876
No 225
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.3e-42 Score=388.99 Aligned_cols=220 Identities=29% Similarity=0.526 Sum_probs=185.9
Q ss_pred EEEEEEEEECCCCCC--CcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCC----CCHHH
Q 000789 375 IELRDVYFRYPARPE--VQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKK----LQLKW 448 (1283)
Q Consensus 375 i~~~~v~f~y~~~~~--~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~----~~~~~ 448 (1283)
|+++||+|+|+.... .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|++||.++.. .+...
T Consensus 2 i~~~~v~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 81 (288)
T PRK13643 2 IKFEKVNYTYQPNSPFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPTEGKVTVGDIVVSSTSKQKEIKP 81 (288)
T ss_pred EEEEEEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCcEEEECCEECccccccccHHH
Confidence 789999999974221 259999999999999999999999999999999999999999999999999853 33556
Q ss_pred HhcccEEEccCC--CCCcccHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHHhCCCCcc-ccccCCCCCCChHHHHHHH
Q 000789 449 IREKIGLVSQEP--ILFATSLRENIAYGKEN--ATDQEIRTAIELANAAKFIDKLPKGLD-TMAGEHGTQLSGGQKQRIA 523 (1283)
Q Consensus 449 ~r~~i~~v~Q~~--~l~~~ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~lp~g~~-t~~~~~g~~LSgGqkqria 523 (1283)
+|+++|||+|+| .+|..|+.||+.|+... .+.++..+ .+.+.++.+ |++ ......+.+||||||||++
T Consensus 82 ~~~~ig~v~q~~~~~l~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~L~~~~~~~~~~~LSgGqkqrva 154 (288)
T PRK13643 82 VRKKVGVVFQFPESQLFEETVLKDVAFGPQNFGIPKEKAEK-----IAAEKLEMV--GLADEFWEKSPFELSGGQMRRVA 154 (288)
T ss_pred HHhhEEEEecCcchhcccchHHHHHHhHHHHcCCCHHHHHH-----HHHHHHHHc--CCChhhccCCcccCCHHHHHHHH
Confidence 788999999998 78889999999987432 22332221 122344444 553 3456777899999999999
Q ss_pred HHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHHhcC
Q 000789 524 IARAILKNPKILLLDEATSALDAESERIVQDALVKIM-TSRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDELIKD 601 (1283)
Q Consensus 524 iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~ 601 (1283)
|||||+.+|++|||||||++||+.+.+.+.+.|+++. +++|+|++||+++.+.. ||+|++|++|++++.|+++++..+
T Consensus 155 iA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 234 (288)
T PRK13643 155 IAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMDDVADYADYVYLLEKGHIISCGTPSDVFQE 234 (288)
T ss_pred HHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHHcC
Confidence 9999999999999999999999999999999999875 47899999999999864 999999999999999999998754
No 226
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.9e-42 Score=388.05 Aligned_cols=216 Identities=25% Similarity=0.445 Sum_probs=186.2
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCC--CCChHHHhc
Q 000789 1039 AIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELP--KFKLSWLRQ 1116 (1283)
Q Consensus 1039 ~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~--~~~~~~lR~ 1116 (1283)
-|+++||+++|+. ..++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++. ..+...+|+
T Consensus 5 ~l~~~~l~~~~~~--~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~ 82 (283)
T PRK13636 5 ILKVEELNYNYSD--GTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPSSGRILFDGKPIDYSRKGLMKLRE 82 (283)
T ss_pred eEEEEeEEEEeCC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCccEEEECCEECCCCcchHHHHHh
Confidence 4899999999963 246999999999999999999999999999999999999999999999999984 344567889
Q ss_pred ceEEEccCC--CCChhhHHHHHhcCCC-CCCCH----HHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHH
Q 000789 1117 QMGLVSQEP--VLFNETIRTNIAYGKQ-GGATE----EEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIA 1189 (1283)
Q Consensus 1117 ~i~~V~Qdp--~Lf~gTIreNl~~g~~-~~~sd----~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRla 1189 (1283)
.++|+||+| .+|+.|++||+.++.. ...+. +.+.++++..++.++. .....+||||||||++
T Consensus 83 ~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~-----------~~~~~~LS~G~~qrl~ 151 (283)
T PRK13636 83 SVGMVFQDPDNQLFSASVYQDVSFGAVNLKLPEDEVRKRVDNALKRTGIEHLK-----------DKPTHCLSFGQKKRVA 151 (283)
T ss_pred hEEEEecCcchhhccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhhh-----------hCCcccCCHHHHHHHH
Confidence 999999998 5789999999986421 12232 3355566666665443 3345689999999999
Q ss_pred HHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHHHh
Q 000789 1190 IARAVLKNPKILLLDEATSALDAESERVVQDALERVMV--NRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDALMK 1266 (1283)
Q Consensus 1190 iARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl~ 1266 (1283)
|||||+.+|+||||||||++||+++...+.+.|+++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++++
T Consensus 152 laraL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~ 231 (283)
T PRK13636 152 IAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDIDIVPLYCDNVFVMKEGRVILQGNPKEVFA 231 (283)
T ss_pred HHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 99999999999999999999999999999999998764 7899999999999974 99999999999999999999876
Q ss_pred c
Q 000789 1267 I 1267 (1283)
Q Consensus 1267 ~ 1267 (1283)
.
T Consensus 232 ~ 232 (283)
T PRK13636 232 E 232 (283)
T ss_pred C
Confidence 3
No 227
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.7e-42 Score=382.71 Aligned_cols=226 Identities=30% Similarity=0.433 Sum_probs=191.4
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCC-----CcceEEECCccCCCCChHH
Q 000789 1039 AIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDP-----DSGHVLLDNIELPKFKLSW 1113 (1283)
Q Consensus 1039 ~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~-----~~G~I~idG~di~~~~~~~ 1113 (1283)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.+.+...
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 79 (250)
T PRK14247 3 KIEIRDLKVSFGQ---VEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIE 79 (250)
T ss_pred eEEEEeeEEEECC---eeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHH
Confidence 4899999999974 3599999999999999999999999999999999999974 6999999999998888888
Q ss_pred HhcceEEEccCCCCC-hhhHHHHHhcCCC-CC--CC----HHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHH
Q 000789 1114 LRQQMGLVSQEPVLF-NETIRTNIAYGKQ-GG--AT----EEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQK 1185 (1283)
Q Consensus 1114 lR~~i~~V~Qdp~Lf-~gTIreNl~~g~~-~~--~s----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQr 1185 (1283)
+|+.|+|+||+|.+| +.|++||+.++.. .. .+ ++++.++++..++.+.+.. .+++ ...+||||||
T Consensus 80 ~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~---~~~~----~~~~LSgG~~ 152 (250)
T PRK14247 80 LRRRVQMVFQIPNPIPNLSIFENVALGLKLNRLVKSKKELQERVRWALEKAQLWDEVKD---RLDA----PAGKLSGGQQ 152 (250)
T ss_pred HhccEEEEeccCccCCCCcHHHHHHHHHHhccccCCHHHHHHHHHHHHHHcCCCcchhh---hhcC----CcccCCHHHH
Confidence 899999999999755 6799999976421 01 11 2456677777776543321 2333 3457999999
Q ss_pred HHHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcCCceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHH
Q 000789 1186 QRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDAL 1264 (1283)
Q Consensus 1186 QRlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eL 1264 (1283)
||++||||++++|+||||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 153 qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 232 (250)
T PRK14247 153 QRLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKKDMTIVLVTHFPQQAARISDYVAFLYKGQIVEWGPTREV 232 (250)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCeEEEECCHHHH
Confidence 9999999999999999999999999999999999999998778999999999999865 999999999999999999999
Q ss_pred HhccCchhHH
Q 000789 1265 MKITDGAYAS 1274 (1283)
Q Consensus 1265 l~~~~g~y~~ 1274 (1283)
.+.+...+.+
T Consensus 233 ~~~~~~~~~~ 242 (250)
T PRK14247 233 FTNPRHELTE 242 (250)
T ss_pred HcCCccHHHH
Confidence 8754444443
No 228
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=1.4e-41 Score=379.82 Aligned_cols=220 Identities=32% Similarity=0.528 Sum_probs=185.8
Q ss_pred EEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCC-----CceEEECCcccCCC--CHH
Q 000789 375 IELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPD-----AGEVLIDGIDIKKL--QLK 447 (1283)
Q Consensus 375 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~-----~G~i~~~g~~~~~~--~~~ 447 (1283)
|+++||+++|++ .++++|+||+|++||+++|+||||||||||+++|+|+++|+ +|+|.++|+++... +..
T Consensus 2 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~ 78 (247)
T TIGR00972 2 IEIENLNLFYGE---KEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVV 78 (247)
T ss_pred EEEEEEEEEECC---eeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchH
Confidence 789999999973 35899999999999999999999999999999999999998 99999999998753 345
Q ss_pred HHhcccEEEccCCCCCcccHHHHHhcCCCC---CCHHHHHHHHHHhcHHHHHHhCCCCcc----ccccCCCCCCChHHHH
Q 000789 448 WIREKIGLVSQEPILFATSLRENIAYGKEN---ATDQEIRTAIELANAAKFIDKLPKGLD----TMAGEHGTQLSGGQKQ 520 (1283)
Q Consensus 448 ~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~---~~~~~~~~~~~~~~~~~~i~~lp~g~~----t~~~~~g~~LSgGqkq 520 (1283)
..++.++|+||++.+|+.|++||+.++... .+.++..+ .+.+.++.+ |++ ........+|||||||
T Consensus 79 ~~~~~i~~v~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~~~~~LSgG~~q 151 (247)
T TIGR00972 79 ELRRRVGMVFQKPNPFPMSIYDNIAYGPRLHGIKDKKELDE-----IVEESLKKA--ALWDEVKDRLHDSALGLSGGQQQ 151 (247)
T ss_pred HHHhheEEEecCcccCCCCHHHHHHhHHHhcCCCCHHHHHH-----HHHHHHHHc--CCCcchhhHhhCCcccCCHHHHH
Confidence 678899999999999999999999875321 11222111 122333333 443 4456677899999999
Q ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHHh
Q 000789 521 RIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMTSRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDELI 599 (1283)
Q Consensus 521 riaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~ 599 (1283)
|++|||||+.+|+++||||||++||+.+...+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 152 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 231 (247)
T TIGR00972 152 RLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKKKYTIVIVTHNMQQAARISDRTAFFYDGELVEYGPTEQIF 231 (247)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999998767899999999999865 9999999999999999999987
Q ss_pred cCCCC
Q 000789 600 KDPEG 604 (1283)
Q Consensus 600 ~~~~~ 604 (1283)
..+..
T Consensus 232 ~~~~~ 236 (247)
T TIGR00972 232 TNPKE 236 (247)
T ss_pred hCCCC
Confidence 65333
No 229
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.1e-42 Score=389.50 Aligned_cols=218 Identities=31% Similarity=0.507 Sum_probs=184.0
Q ss_pred EEEEEEEEECCCCC--CcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCC----CChHH
Q 000789 1040 IELRCVSFKYPTRP--DVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPK----FKLSW 1113 (1283)
Q Consensus 1040 I~~~nVsf~Y~~~~--~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~----~~~~~ 1113 (1283)
|+++||+++|+... ..++|+||||+|++||++||+|+||||||||+++|.|+++|++|+|.+||+++.. .+...
T Consensus 3 l~~~~l~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (290)
T PRK13634 3 ITFQKVEHRYQYKTPFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPTSGTVTIGERVITAGKKNKKLKP 82 (290)
T ss_pred EEEEEEEEEECCCCcccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 88999999997421 1469999999999999999999999999999999999999999999999999863 34567
Q ss_pred HhcceEEEccCC--CCChhhHHHHHhcCCC-CCCCHHH----HHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHH
Q 000789 1114 LRQQMGLVSQEP--VLFNETIRTNIAYGKQ-GGATEEE----IIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQ 1186 (1283)
Q Consensus 1114 lR~~i~~V~Qdp--~Lf~gTIreNl~~g~~-~~~sd~e----i~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQ 1186 (1283)
+|+.++||||+| .+|+.|++||+.++.. ...+.++ +.++++.+++.+.+ .......|||||||
T Consensus 83 ~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~----------~~~~~~~LSgGq~q 152 (290)
T PRK13634 83 LRKKVGIVFQFPEHQLFEETVEKDICFGPMNFGVSEEDAKQKAREMIELVGLPEEL----------LARSPFELSGGQMR 152 (290)
T ss_pred HHhhEEEEeeCchhhhhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCChhh----------hhCCcccCCHHHHH
Confidence 888999999998 6888999999987621 1233333 44455555553111 23344689999999
Q ss_pred HHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHH
Q 000789 1187 RIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMV--NRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDA 1263 (1283)
Q Consensus 1187 RlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~e 1263 (1283)
|++|||||+.+|++|||||||++||+.+...+.+.|+++.+ +.|||+|||+++.+.. ||||++|++|++++.|++++
T Consensus 153 rv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~~~~~~~drv~~l~~G~i~~~g~~~~ 232 (290)
T PRK13634 153 RVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSMEDAARYADQIVVMHKGTVFLQGTPRE 232 (290)
T ss_pred HHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHH
Confidence 99999999999999999999999999999999999998753 7899999999999865 99999999999999999999
Q ss_pred HHhc
Q 000789 1264 LMKI 1267 (1283)
Q Consensus 1264 Ll~~ 1267 (1283)
+.+.
T Consensus 233 ~~~~ 236 (290)
T PRK13634 233 IFAD 236 (290)
T ss_pred HhcC
Confidence 8753
No 230
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.8e-42 Score=385.83 Aligned_cols=212 Identities=30% Similarity=0.567 Sum_probs=182.6
Q ss_pred cEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHHhccc
Q 000789 374 EIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWIREKI 453 (1283)
Q Consensus 374 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 453 (1283)
.|+++||+|+|++. .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|+++...+...++++|
T Consensus 4 ~l~~~~l~~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i 81 (274)
T PRK13647 4 IIEVEDLHFRYKDG--TKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQRGRVKVMGREVNAENEKWVRSKV 81 (274)
T ss_pred eEEEEEEEEEeCCC--CeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCceEEEECCEECCCCCHHHHHhhE
Confidence 48999999999632 3599999999999999999999999999999999999999999999999999888888888899
Q ss_pred EEEccCC--CCCcccHHHHHhcCCCC--CCH----HHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHH
Q 000789 454 GLVSQEP--ILFATSLRENIAYGKEN--ATD----QEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIA 525 (1283)
Q Consensus 454 ~~v~Q~~--~l~~~ti~~ni~~~~~~--~~~----~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiA 525 (1283)
+||+|+| .++..|+.||+.++... .+. +++.++++..++ .........+||||||||++||
T Consensus 82 ~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~L-----------~~~~~~~~~~LSgG~~qrv~la 150 (274)
T PRK13647 82 GLVFQDPDDQVFSSTVWDDVAFGPVNMGLDKDEVERRVEEALKAVRM-----------WDFRDKPPYHLSYGQKKRVAIA 150 (274)
T ss_pred EEEecChhhhhccCcHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCC-----------HHHhcCChhhCCHHHHHHHHHH
Confidence 9999998 57888999999986321 222 223334444444 3334445568999999999999
Q ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC-CCeEEEEecCchhhh-ccCEEEEEeCCEEeEecChhHH
Q 000789 526 RAILKNPKILLLDEATSALDAESERIVQDALVKIMT-SRTTVVVAHRLTTIR-NADLIAVVHQGKIVEKGTHDEL 598 (1283)
Q Consensus 526 Ral~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~-~~t~i~itH~l~~~~-~~d~i~vl~~G~i~~~g~~~~l 598 (1283)
|||+.+|++|||||||++||+.+...+.+.|+++.+ ++|+|++||+++.+. .||+|++|++|++++.|+++++
T Consensus 151 raL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 225 (274)
T PRK13647 151 GVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVDLAAEWADQVIVLKEGRVLAEGDKSLL 225 (274)
T ss_pred HHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHh
Confidence 999999999999999999999999999999998853 789999999999985 4999999999999999998754
No 231
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-41 Score=387.19 Aligned_cols=220 Identities=32% Similarity=0.568 Sum_probs=186.1
Q ss_pred EEEEEEEEECCCCC--CCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCC----CCHHH
Q 000789 375 IELRDVYFRYPARP--EVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKK----LQLKW 448 (1283)
Q Consensus 375 i~~~~v~f~y~~~~--~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~----~~~~~ 448 (1283)
|+++||+|+|++.. ..++|+||||+|++||+++|+||||||||||+++|+|+++|++|+|.+||+++.. .+...
T Consensus 3 l~~~~l~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (290)
T PRK13634 3 ITFQKVEHRYQYKTPFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPTSGTVTIGERVITAGKKNKKLKP 82 (290)
T ss_pred EEEEEEEEEECCCCcccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 78999999997422 1469999999999999999999999999999999999999999999999999863 34556
Q ss_pred HhcccEEEccCC--CCCcccHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHHhCCCCcc-ccccCCCCCCChHHHHHHH
Q 000789 449 IREKIGLVSQEP--ILFATSLRENIAYGKEN--ATDQEIRTAIELANAAKFIDKLPKGLD-TMAGEHGTQLSGGQKQRIA 523 (1283)
Q Consensus 449 ~r~~i~~v~Q~~--~l~~~ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~lp~g~~-t~~~~~g~~LSgGqkqria 523 (1283)
.|++||||+|+| .+|+.||+|||.++... .+.++..+ .+++.++.+ |++ ......+.+||||||||++
T Consensus 83 ~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~-----~~~~~l~~~--gL~~~~~~~~~~~LSgGq~qrv~ 155 (290)
T PRK13634 83 LRKKVGIVFQFPEHQLFEETVEKDICFGPMNFGVSEEDAKQ-----KAREMIELV--GLPEELLARSPFELSGGQMRRVA 155 (290)
T ss_pred HHhhEEEEeeCchhhhhhhhHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHC--CCChhhhhCCcccCCHHHHHHHH
Confidence 778999999998 68888999999987432 23333222 122344444 564 3346677899999999999
Q ss_pred HHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHHhc
Q 000789 524 IARAILKNPKILLLDEATSALDAESERIVQDALVKIMT--SRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDELIK 600 (1283)
Q Consensus 524 iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~ 600 (1283)
|||||+.+|++|||||||++||+.+...+.+.|+++.+ +.|+|+|||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 156 lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~~~~~~~drv~~l~~G~i~~~g~~~~~~~ 235 (290)
T PRK13634 156 IAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSMEDAARYADQIVVMHKGTVFLQGTPREIFA 235 (290)
T ss_pred HHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHhc
Confidence 99999999999999999999999999999999998853 7899999999999865 99999999999999999999875
Q ss_pred C
Q 000789 601 D 601 (1283)
Q Consensus 601 ~ 601 (1283)
.
T Consensus 236 ~ 236 (290)
T PRK13634 236 D 236 (290)
T ss_pred C
Confidence 4
No 232
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.6e-42 Score=380.64 Aligned_cols=217 Identities=32% Similarity=0.471 Sum_probs=184.0
Q ss_pred EEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHhcceE
Q 000789 1040 IELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMG 1119 (1283)
Q Consensus 1040 I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~ 1119 (1283)
++++||+++|++. .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+...+|+.++
T Consensus 1 l~~~~l~~~~~~~--~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 78 (242)
T cd03295 1 IEFENVTKRYGGG--KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPTSGEIFIDGEDIREQDPVELRRKIG 78 (242)
T ss_pred CEEEEEEEEeCCc--ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCeEcCcCChHHhhcceE
Confidence 4789999999741 35999999999999999999999999999999999999999999999999998888778889999
Q ss_pred EEccCCCCCh-hhHHHHHhcCCC-CCCC----HHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHHHH
Q 000789 1120 LVSQEPVLFN-ETIRTNIAYGKQ-GGAT----EEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARA 1193 (1283)
Q Consensus 1120 ~V~Qdp~Lf~-gTIreNl~~g~~-~~~s----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiARA 1193 (1283)
|+||+|.+|. .|++||+.++.. ...+ ++++.++++..++.+ +......+.+||||||||++||||
T Consensus 79 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~l~l~~---------~~~~~~~~~~LS~G~~qrv~lara 149 (242)
T cd03295 79 YVIQQIGLFPHMTVEENIALVPKLLKWPKEKIRERADELLALVGLDP---------AEFADRYPHELSGGQQQRVGVARA 149 (242)
T ss_pred EEccCccccCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCc---------HHHHhcChhhCCHHHHHHHHHHHH
Confidence 9999999885 699999976411 1112 223444444444331 012344456899999999999999
Q ss_pred HccCCCEEEEecccCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHHHhc
Q 000789 1194 VLKNPKILLLDEATSALDAESERVVQDALERVMV--NRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDALMKI 1267 (1283)
Q Consensus 1194 ll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl~~ 1267 (1283)
++++|++|||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 150 l~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 226 (242)
T cd03295 150 LAADPPLLLMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDIDEAFRLADRIAIMKNGEIVQVGTPDEILRS 226 (242)
T ss_pred HhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHcC
Confidence 9999999999999999999999999999998753 7899999999998765 999999999999999999999764
No 233
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.1e-42 Score=379.68 Aligned_cols=215 Identities=37% Similarity=0.574 Sum_probs=183.3
Q ss_pred EEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHHhcccE
Q 000789 375 IELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWIREKIG 454 (1283)
Q Consensus 375 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 454 (1283)
|+++||+++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. .+++++
T Consensus 3 l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~--~~~~i~ 77 (239)
T cd03296 3 IEVRNVSKRFGD---FVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPDSGTILFGGEDATDVPV--QERNVG 77 (239)
T ss_pred EEEEeEEEEECC---EEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCc--cccceE
Confidence 789999999964 369999999999999999999999999999999999999999999999999876543 256899
Q ss_pred EEccCCCCCc-ccHHHHHhcCCCCC------CHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHH
Q 000789 455 LVSQEPILFA-TSLRENIAYGKENA------TDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARA 527 (1283)
Q Consensus 455 ~v~Q~~~l~~-~ti~~ni~~~~~~~------~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARa 527 (1283)
||+|++.+|. .|++||+.++.... ...+.. ..+.+.++.+ |++........+||||||||++||||
T Consensus 78 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~a 150 (239)
T cd03296 78 FVFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIR-----AKVHELLKLV--QLDWLADRYPAQLSGGQRQRVALARA 150 (239)
T ss_pred EEecCCcccCCCCHHHHHhhhhhhccccccCCHHHHH-----HHHHHHHHHc--CChhhhhcChhhCCHHHHHHHHHHHH
Confidence 9999999886 59999999864211 111111 1223445555 56655666778999999999999999
Q ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHHhcC
Q 000789 528 ILKNPKILLLDEATSALDAESERIVQDALVKIMT--SRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDELIKD 601 (1283)
Q Consensus 528 l~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~ 601 (1283)
|+.+|++|||||||++||+++.+.+.+.|.++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 151 l~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 227 (239)
T cd03296 151 LAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQEEALEVADRVVVMNKGRIEQVGTPDEVYDH 227 (239)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHHhcC
Confidence 9999999999999999999999999999998753 6899999999998765 999999999999999999998764
No 234
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=9.9e-42 Score=375.21 Aligned_cols=217 Identities=26% Similarity=0.420 Sum_probs=179.2
Q ss_pred EEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHH-hcce
Q 000789 1040 IELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWL-RQQM 1118 (1283)
Q Consensus 1040 I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~l-R~~i 1118 (1283)
|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+...+ |+++
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (222)
T cd03224 1 LEVENLNAGYGK---SQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSIRFDGRDITGLPPHERARAGI 77 (222)
T ss_pred CEEeeEEeecCC---eeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCCCCHHHHHhcCe
Confidence 578999999974 359999999999999999999999999999999999999999999999999988776554 6789
Q ss_pred EEEccCCCCChh-hHHHHHhcCCCCCCCHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHHHHHccC
Q 000789 1119 GLVSQEPVLFNE-TIRTNIAYGKQGGATEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKN 1197 (1283)
Q Consensus 1119 ~~V~Qdp~Lf~g-TIreNl~~g~~~~~sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiARAll~~ 1197 (1283)
+|+||++.+|.. |++||+.++.. .....+..+.+ .++++.++ +++........+||||||||++||||++++
T Consensus 78 ~~~~q~~~~~~~~t~~~~l~~~~~-~~~~~~~~~~~-----~~~l~~~~-~l~~~~~~~~~~LS~G~~qrv~laral~~~ 150 (222)
T cd03224 78 GYVPEGRRIFPELTVEENLLLGAY-ARRRAKRKARL-----ERVYELFP-RLKERRKQLAGTLSGGEQQMLAIARALMSR 150 (222)
T ss_pred EEeccccccCCCCcHHHHHHHHhh-hcCchhHHHHH-----HHHHHHHH-hhhhhhhCchhhCCHHHHHHHHHHHHHhcC
Confidence 999999999876 99999987522 11111111111 11122211 122233344568999999999999999999
Q ss_pred CCEEEEecccCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHHHh
Q 000789 1198 PKILLLDEATSALDAESERVVQDALERVM-VNRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDALMK 1266 (1283)
Q Consensus 1198 p~ILiLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl~ 1266 (1283)
|++|||||||++||+++...+.+.|+++. +++|+|++||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 151 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 221 (222)
T cd03224 151 PKLLLLDEPSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNARFALEIADRAYVLERGRVVLEGTAAELLA 221 (222)
T ss_pred CCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhccEEEEeeCCeEEEeCCHHHHhc
Confidence 99999999999999999999999999875 47899999999998866 99999999999999999988764
No 235
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.7e-42 Score=382.64 Aligned_cols=219 Identities=31% Similarity=0.525 Sum_probs=185.4
Q ss_pred cEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCC-----CCCceEEECCcccCC--CCH
Q 000789 374 EIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYD-----PDAGEVLIDGIDIKK--LQL 446 (1283)
Q Consensus 374 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~~~g~~~~~--~~~ 446 (1283)
.|+++||+++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.+||+++.. .+.
T Consensus 6 ~l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 82 (253)
T PRK14242 6 KMEARGLSFFYGD---FQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVDV 82 (253)
T ss_pred EEEEeeeEEEECC---eeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccCH
Confidence 5899999999963 359999999999999999999999999999999999975 689999999999864 345
Q ss_pred HHHhcccEEEccCCCCCcccHHHHHhcCCCC--C-C----HHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHH
Q 000789 447 KWIREKIGLVSQEPILFATSLRENIAYGKEN--A-T----DQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQK 519 (1283)
Q Consensus 447 ~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~--~-~----~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqk 519 (1283)
..+|++++|++|++.+|+.|++||+.++... . . .+++.++++..++.+++ .+..+..+.+||||||
T Consensus 83 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LSgGq~ 155 (253)
T PRK14242 83 VELRRRVGMVFQKPNPFPKSIFENVAYGLRVNGVKDKAYLAERVERSLRHAALWDEV-------KDRLHESALGLSGGQQ 155 (253)
T ss_pred HHHhhcEEEEecCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCchhh-------hHHhhCCcccCCHHHH
Confidence 5678899999999999989999999875311 1 1 12333444444333222 2345667789999999
Q ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHH
Q 000789 520 QRIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMTSRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDEL 598 (1283)
Q Consensus 520 qriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l 598 (1283)
||++|||||+.+|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||+|++|++|+|++.|+++++
T Consensus 156 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 235 (253)
T PRK14242 156 QRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELKARYTIIIVTHNMQQAARVSDVTAFFYMGKLIEVGPTEQI 235 (253)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCeEEEEEecHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998767899999999999865 999999999999999999998
Q ss_pred hcCC
Q 000789 599 IKDP 602 (1283)
Q Consensus 599 ~~~~ 602 (1283)
...+
T Consensus 236 ~~~~ 239 (253)
T PRK14242 236 FTRP 239 (253)
T ss_pred HcCC
Confidence 7653
No 236
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.5e-42 Score=377.59 Aligned_cols=211 Identities=29% Similarity=0.448 Sum_probs=178.5
Q ss_pred cEEEEEEEEECCCCC-CcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHH---H
Q 000789 1039 AIELRCVSFKYPTRP-DVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSW---L 1114 (1283)
Q Consensus 1039 ~I~~~nVsf~Y~~~~-~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~---l 1114 (1283)
-|+++||+++|+.+. ..++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.+||.++.+.+... +
T Consensus 5 ~l~~~~l~~~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~ 84 (233)
T PRK11629 5 LLQCDNLCKRYQEGSVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAEL 84 (233)
T ss_pred eEEEEeEEEEcCCCCcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCHHHHHHH
Confidence 489999999997431 146999999999999999999999999999999999999999999999999998887643 3
Q ss_pred h-cceEEEccCCCCChh-hHHHHHhcCCC-CCCC----HHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHH
Q 000789 1115 R-QQMGLVSQEPVLFNE-TIRTNIAYGKQ-GGAT----EEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQR 1187 (1283)
Q Consensus 1115 R-~~i~~V~Qdp~Lf~g-TIreNl~~g~~-~~~s----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQR 1187 (1283)
| +.++|+||++.+|.. |++||+.++.. ...+ ++++.++++..++.++ ......+||||||||
T Consensus 85 ~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-----------~~~~~~~LSgG~~qr 153 (233)
T PRK11629 85 RNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINSRALEMLAAVGLEHR-----------ANHRPSELSGGERQR 153 (233)
T ss_pred HhccEEEEecCcccCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchh-----------hhCChhhCCHHHHHH
Confidence 3 679999999998865 99999976311 1122 2345555555555433 333446899999999
Q ss_pred HHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHc--CCceEEEEecCchHHhhcCEEEEEeCCEEEEecC
Q 000789 1188 IAIARAVLKNPKILLLDEATSALDAESERVVQDALERVM--VNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGS 1260 (1283)
Q Consensus 1188 laiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~--~~~TvI~IaHrl~ti~~~D~I~vl~~G~Ive~Gt 1260 (1283)
++||||++.+|+||||||||++||+++...+.+.|+++. +++|+|+|||+++.+..+|++++|++|+|++.|.
T Consensus 154 l~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~~~~~~~~~~~l~~G~i~~~~~ 228 (233)
T PRK11629 154 VAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAELS 228 (233)
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhhCEEEEEECCEEEEEec
Confidence 999999999999999999999999999999999999874 4789999999999999999999999999998775
No 237
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.7e-42 Score=372.29 Aligned_cols=204 Identities=25% Similarity=0.458 Sum_probs=178.0
Q ss_pred EEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHhcceE
Q 000789 1040 IELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMG 1119 (1283)
Q Consensus 1040 I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~ 1119 (1283)
|+++||+|+|++ .++++|+||+|++| ++||+||||||||||+++|.|+++|++|+|.++|.++.+.+ ..+|++++
T Consensus 1 i~~~~~~~~~~~---~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~-~~~~~~i~ 75 (211)
T cd03264 1 LQLENLTKRYGK---KRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPSSGTIRIDGQDVLKQP-QKLRRRIG 75 (211)
T ss_pred CEEEEEEEEECC---EEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCCccccch-HHHHhheE
Confidence 579999999974 35999999999999 99999999999999999999999999999999999998776 67899999
Q ss_pred EEccCCCCChh-hHHHHHhcCCC-CCCC----HHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHHHH
Q 000789 1120 LVSQEPVLFNE-TIRTNIAYGKQ-GGAT----EEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARA 1193 (1283)
Q Consensus 1120 ~V~Qdp~Lf~g-TIreNl~~g~~-~~~s----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiARA 1193 (1283)
|+||+|.+|.. |++||+.+... ...+ ++++.++++..++.++.+ +.+ .+||||||||++||||
T Consensus 76 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~----~~LS~G~~qrv~la~a 144 (211)
T cd03264 76 YLPQEFGVYPNFTVREFLDYIAWLKGIPSKEVKARVDEVLELVNLGDRAK-------KKI----GSLSGGMRRRVGIAQA 144 (211)
T ss_pred EecCCCcccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCHHHHh-------Cch----hhCCHHHHHHHHHHHH
Confidence 99999999875 99999975310 1112 345667777777765533 222 4799999999999999
Q ss_pred HccCCCEEEEecccCCCCHHHHHHHHHHHHHHcCCceEEEEecCchHHhh-cCEEEEEeCCEEEEec
Q 000789 1194 VLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQG 1259 (1283)
Q Consensus 1194 ll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~G 1259 (1283)
++++|++|||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||++++|++|++++.|
T Consensus 145 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~g~i~~~g 211 (211)
T cd03264 145 LVGDPSILIVDEPTAGLDPEERIRFRNLLSELGEDRIVILSTHIVEDVESLCNQVAVLNKGKLVFEG 211 (211)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEecC
Confidence 99999999999999999999999999999998777999999999999865 9999999999999875
No 238
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.7e-42 Score=389.23 Aligned_cols=217 Identities=24% Similarity=0.444 Sum_probs=183.0
Q ss_pred EEEEEEEEECCCCC--CcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCC---------
Q 000789 1040 IELRCVSFKYPTRP--DVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPK--------- 1108 (1283)
Q Consensus 1040 I~~~nVsf~Y~~~~--~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~--------- 1108 (1283)
|+++||+++|++.. ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..
T Consensus 3 i~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 82 (305)
T PRK13651 3 IKVKNIVKIFNKKLPTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPDTGTIEWIFKDEKNKKKTKEKEK 82 (305)
T ss_pred EEEEEEEEEECCCCCccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEEeceecccccccccccc
Confidence 89999999997432 1359999999999999999999999999999999999999999999999887632
Q ss_pred ---------------CChHHHhcceEEEccCC--CCChhhHHHHHhcCCC-CCCCHH----HHHHHHHHhChH-HHHHhC
Q 000789 1109 ---------------FKLSWLRQQMGLVSQEP--VLFNETIRTNIAYGKQ-GGATEE----EIIAATEASNAH-NFISAL 1165 (1283)
Q Consensus 1109 ---------------~~~~~lR~~i~~V~Qdp--~Lf~gTIreNl~~g~~-~~~sd~----ei~~al~~a~l~-~~I~~l 1165 (1283)
.+...+|++|+||||+| .+|..|++|||.++.. ...+.+ ++.++++.+++. ++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~---- 158 (305)
T PRK13651 83 VLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVSKEEAKKRAAKYIELVGLDESY---- 158 (305)
T ss_pred cccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCChhh----
Confidence 13456889999999986 6888999999987632 123333 345555555553 23
Q ss_pred CCCcccccCCCCCCCChhHHHHHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchHHhh-
Q 000789 1166 PHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVM-VNRTTVVVAHRLTTIKN- 1243 (1283)
Q Consensus 1166 p~Gldt~vge~G~~LSgGQrQRlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHrl~ti~~- 1243 (1283)
......+||||||||++|||||+.+|++|||||||++||+.+...+.+.|+++. .++|+|+|||+++.+..
T Consensus 159 -------~~~~~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd~~~~~~~ 231 (305)
T PRK13651 159 -------LQRSPFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHDLDNVLEW 231 (305)
T ss_pred -------hhCChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeCHHHHHHh
Confidence 234456899999999999999999999999999999999999999999998875 47899999999998754
Q ss_pred cCEEEEEeCCEEEEecChHHHHhc
Q 000789 1244 ADIIAVVKNGVIAEQGSHDALMKI 1267 (1283)
Q Consensus 1244 ~D~I~vl~~G~Ive~Gt~~eLl~~ 1267 (1283)
||||++|++|++++.|+++++.+.
T Consensus 232 adrv~vl~~G~i~~~g~~~~~~~~ 255 (305)
T PRK13651 232 TKRTIFFKDGKIIKDGDTYDILSD 255 (305)
T ss_pred CCEEEEEECCEEEEECCHHHHhcC
Confidence 999999999999999999998764
No 239
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=1.5e-41 Score=391.16 Aligned_cols=229 Identities=30% Similarity=0.464 Sum_probs=192.0
Q ss_pred cEEEEEEEEECCCCC----------CCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCC
Q 000789 374 EIELRDVYFRYPARP----------EVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKK 443 (1283)
Q Consensus 374 ~i~~~~v~f~y~~~~----------~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~ 443 (1283)
-|+++|++++|+.+. ..++++||||+|++||++||+|+||||||||+++|+|+++|++|+|.++|+++.+
T Consensus 8 ~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~~G~I~~~G~~i~~ 87 (331)
T PRK15079 8 LLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGEVAWLGKDLLG 87 (331)
T ss_pred eEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCCcEEEECCEECCc
Confidence 489999999996321 2468999999999999999999999999999999999999999999999999988
Q ss_pred CCHHH---HhcccEEEccCC--CCCc-ccHHHHHhcCC----CCCCHHHHHHHHHHhcHHHHHHhCCCCcc-ccccCCCC
Q 000789 444 LQLKW---IREKIGLVSQEP--ILFA-TSLRENIAYGK----ENATDQEIRTAIELANAAKFIDKLPKGLD-TMAGEHGT 512 (1283)
Q Consensus 444 ~~~~~---~r~~i~~v~Q~~--~l~~-~ti~~ni~~~~----~~~~~~~~~~~~~~~~~~~~i~~lp~g~~-t~~~~~g~ 512 (1283)
++... +|++|+||+|+| .+++ .||.|||.++. +..+.++..+.+ .+.++.+ |++ ......+.
T Consensus 88 ~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~~~~~~~~~~~~~-----~~~l~~v--gl~~~~~~~~p~ 160 (331)
T PRK15079 88 MKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKLSRQEVKDRV-----KAMMLKV--GLLPNLINRYPH 160 (331)
T ss_pred CCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhccCCCHHHHHHHH-----HHHHHHc--CCChHHhcCCcc
Confidence 87543 577899999998 4774 69999997642 123333332222 2344444 552 34567778
Q ss_pred CCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhc-cCEEEEEeCCEE
Q 000789 513 QLSGGQKQRIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMT--SRTTVVVAHRLTTIRN-ADLIAVVHQGKI 589 (1283)
Q Consensus 513 ~LSgGqkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i 589 (1283)
+||||||||++|||||+.+|++||+||||++||+.+...+.+.|+++.+ +.|+|+|||+++.+.. ||+|++|++|+|
T Consensus 161 ~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~~~~~~~dri~vl~~G~i 240 (331)
T PRK15079 161 EFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLAVVKHISDRVLVMYLGHA 240 (331)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEE
Confidence 9999999999999999999999999999999999999999999998864 6899999999999976 999999999999
Q ss_pred eEecChhHHhcCCCChhHHH
Q 000789 590 VEKGTHDELIKDPEGPYTQL 609 (1283)
Q Consensus 590 ~~~g~~~~l~~~~~~~~~~~ 609 (1283)
++.|++++++.++...|.+.
T Consensus 241 ve~g~~~~i~~~~~~py~~~ 260 (331)
T PRK15079 241 VELGTYDEVYHNPLHPYTKA 260 (331)
T ss_pred EEEcCHHHHHcCCCCHHHHH
Confidence 99999999998766677663
No 240
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=1.4e-41 Score=380.90 Aligned_cols=219 Identities=30% Similarity=0.472 Sum_probs=185.7
Q ss_pred EEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCC---------
Q 000789 1040 IELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFK--------- 1110 (1283)
Q Consensus 1040 I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~--------- 1110 (1283)
|+++||+++|++ .++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.+||.++.+++
T Consensus 1 i~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 77 (252)
T TIGR03005 1 VRFSDVTKRFGI---LTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPIDEGQIQVEGEQLYHMPGRNGPLVPA 77 (252)
T ss_pred CEEEEEEEEeCC---eeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccccccccccccc
Confidence 579999999974 35999999999999999999999999999999999999999999999999987553
Q ss_pred ----hHHHhcceEEEccCCCCCh-hhHHHHHhcCCC--CCCC----HHHHHHHHHHhChHHHHHhCCCCcccccCCCCCC
Q 000789 1111 ----LSWLRQQMGLVSQEPVLFN-ETIRTNIAYGKQ--GGAT----EEEIIAATEASNAHNFISALPHGYETNVGERGVQ 1179 (1283)
Q Consensus 1111 ----~~~lR~~i~~V~Qdp~Lf~-gTIreNl~~g~~--~~~s----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~ 1179 (1283)
...+|+.++||+|++.+|. .|++||+.++.. .... ++++.++++..++.+++. .....
T Consensus 78 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~-----------~~~~~ 146 (252)
T TIGR03005 78 DEKHLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLVLGMARAEAEKRAMELLDMVGLADKAD-----------HMPAQ 146 (252)
T ss_pred chhHHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhHhh-----------cChhh
Confidence 2467889999999998884 799999986411 1112 234555666666555443 33458
Q ss_pred CChhHHHHHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchHHhh-cCEEEEEeCCEEE
Q 000789 1180 LSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMV--NRTTVVVAHRLTTIKN-ADIIAVVKNGVIA 1256 (1283)
Q Consensus 1180 LSgGQrQRlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~D~I~vl~~G~Iv 1256 (1283)
||||||||++||||++++|++|||||||++||+.+...+.+.|+++.+ ++|+|+|||+++.+.. ||++++|++|+++
T Consensus 147 LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~ 226 (252)
T TIGR03005 147 LSGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMGFAREFADRVCFFDKGRIV 226 (252)
T ss_pred cCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEE
Confidence 999999999999999999999999999999999999999999998753 7899999999999865 9999999999999
Q ss_pred EecChHHHHhccCchh
Q 000789 1257 EQGSHDALMKITDGAY 1272 (1283)
Q Consensus 1257 e~Gt~~eLl~~~~g~y 1272 (1283)
+.|+++++.+.+...|
T Consensus 227 ~~g~~~~~~~~~~~~~ 242 (252)
T TIGR03005 227 EQGKPDEIFRQPKEER 242 (252)
T ss_pred EeCCHHHHhcCCCcHH
Confidence 9999999986544333
No 241
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-41 Score=385.32 Aligned_cols=215 Identities=29% Similarity=0.491 Sum_probs=188.4
Q ss_pred EEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHhcceE
Q 000789 1040 IELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMG 1119 (1283)
Q Consensus 1040 I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~ 1119 (1283)
++++||+++|+.+ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||+++...+...++++++
T Consensus 4 l~~~~l~~~~~~~--~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 81 (277)
T PRK13652 4 IETRDLCYSYSGS--KEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPTSGSVLIRGEPITKENIREVRKFVG 81 (277)
T ss_pred EEEEEEEEEeCCC--CceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhheE
Confidence 7899999999632 35999999999999999999999999999999999999999999999999998777778899999
Q ss_pred EEccCC--CCChhhHHHHHhcCCC-CCCCH----HHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHHH
Q 000789 1120 LVSQEP--VLFNETIRTNIAYGKQ-GGATE----EEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIAR 1192 (1283)
Q Consensus 1120 ~V~Qdp--~Lf~gTIreNl~~g~~-~~~sd----~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiAR 1192 (1283)
||||+| .+|+.|++||+.++.. ...+. +.+.++++..++.++..+.| ..||||||||++|||
T Consensus 82 ~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~Gq~qrl~lar 150 (277)
T PRK13652 82 LVFQNPDDQIFSPTVEQDIAFGPINLGLDEETVAHRVSSALHMLGLEELRDRVP-----------HHLSGGEKKRVAIAG 150 (277)
T ss_pred EEecCcccccccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhHhcCCc-----------ccCCHHHHHHHHHHH
Confidence 999998 4788999999986421 12232 34667777777766654443 489999999999999
Q ss_pred HHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchHHh-hcCEEEEEeCCEEEEecChHHHHhc
Q 000789 1193 AVLKNPKILLLDEATSALDAESERVVQDALERVMV--NRTTVVVAHRLTTIK-NADIIAVVKNGVIAEQGSHDALMKI 1267 (1283)
Q Consensus 1193 All~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~-~~D~I~vl~~G~Ive~Gt~~eLl~~ 1267 (1283)
||+.+|++|||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+. .||+|++|++|++++.|+++++++.
T Consensus 151 aL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~~drv~~l~~G~i~~~g~~~~~~~~ 228 (277)
T PRK13652 151 VIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLDLVPEMADYIYVMDKGRIVAYGTVEEIFLQ 228 (277)
T ss_pred HHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEEECCHHHHhcC
Confidence 99999999999999999999999999999998753 789999999999985 5999999999999999999999763
No 242
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1e-41 Score=374.03 Aligned_cols=210 Identities=24% Similarity=0.407 Sum_probs=180.9
Q ss_pred EEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHhcceE
Q 000789 1040 IELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMG 1119 (1283)
Q Consensus 1040 I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~ 1119 (1283)
|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++... ...+|++++
T Consensus 1 i~~~~~~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~-~~~~~~~i~ 76 (220)
T cd03265 1 IEVENLVKKYGD---FEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPTSGRATVAGHDVVRE-PREVRRRIG 76 (220)
T ss_pred CEEEEEEEEECC---EEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecCcC-hHHHhhcEE
Confidence 578999999974 3599999999999999999999999999999999999999999999999988653 356788999
Q ss_pred EEccCCCCCh-hhHHHHHhcCCC-CCC----CHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHHHH
Q 000789 1120 LVSQEPVLFN-ETIRTNIAYGKQ-GGA----TEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARA 1193 (1283)
Q Consensus 1120 ~V~Qdp~Lf~-gTIreNl~~g~~-~~~----sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiARA 1193 (1283)
|+||++.+|. .|++||+.++.. ... .++++.++++..++.++....| .+||||||||++||||
T Consensus 77 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qr~~la~a 145 (220)
T cd03265 77 IVFQDLSVDDELTGWENLYIHARLYGVPGAERRERIDELLDFVGLLEAADRLV-----------KTYSGGMRRRLEIARS 145 (220)
T ss_pred EecCCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhCCh-----------hhCCHHHHHHHHHHHH
Confidence 9999998886 499999975311 112 2345667777777766543332 4799999999999999
Q ss_pred HccCCCEEEEecccCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHH
Q 000789 1194 VLKNPKILLLDEATSALDAESERVVQDALERVMV--NRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDAL 1264 (1283)
Q Consensus 1194 ll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eL 1264 (1283)
++.+|++|||||||++||+++.+.+.+.|+++.+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 146 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 219 (220)
T cd03265 146 LVHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYMEEAEQLCDRVAIIDHGRIIAEGTPEEL 219 (220)
T ss_pred HhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEeCChHHc
Confidence 9999999999999999999999999999998753 6899999999999876 999999999999999998875
No 243
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.1e-42 Score=399.39 Aligned_cols=218 Identities=29% Similarity=0.476 Sum_probs=187.8
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHhcce
Q 000789 1039 AIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQM 1118 (1283)
Q Consensus 1039 ~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i 1118 (1283)
.|+++|++++|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||.++.+.+. .+++|
T Consensus 3 ~l~i~~l~~~~~~---~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~~G~I~~~g~~i~~~~~--~~~~i 77 (369)
T PRK11000 3 SVTLRNVTKAYGD---VVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDITSGDLFIGEKRMNDVPP--AERGV 77 (369)
T ss_pred EEEEEEEEEEeCC---eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCH--hHCCE
Confidence 4899999999974 359999999999999999999999999999999999999999999999999987654 35789
Q ss_pred EEEccCCCCCh-hhHHHHHhcCCC-CCCC----HHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHHH
Q 000789 1119 GLVSQEPVLFN-ETIRTNIAYGKQ-GGAT----EEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIAR 1192 (1283)
Q Consensus 1119 ~~V~Qdp~Lf~-gTIreNl~~g~~-~~~s----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiAR 1192 (1283)
+||||++.+|. .|++||+.++.. ...+ ++++.++++..++.++..+.| .+||||||||++|||
T Consensus 78 ~~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~~~~-----------~~LSgGq~QRvaLAr 146 (369)
T PRK11000 78 GMVFQSYALYPHLSVAENMSFGLKLAGAKKEEINQRVNQVAEVLQLAHLLDRKP-----------KALSGGQRQRVAIGR 146 (369)
T ss_pred EEEeCCcccCCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhhhcCCh-----------hhCCHHHHHHHHHHH
Confidence 99999999996 599999987521 1122 234666777777665544433 479999999999999
Q ss_pred HHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHHHhccC
Q 000789 1193 AVLKNPKILLLDEATSALDAESERVVQDALERVMV--NRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDALMKITD 1269 (1283)
Q Consensus 1193 All~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl~~~~ 1269 (1283)
||+++|++||||||||+||+.+.+.+.+.|+++.+ +.|+|+|||+++.+.. ||+|++|++|++++.|+++++...+.
T Consensus 147 aL~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~~~~~~~d~i~vl~~G~i~~~g~~~~i~~~p~ 226 (369)
T PRK11000 147 TLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHYPA 226 (369)
T ss_pred HHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCcc
Confidence 99999999999999999999999999999998753 7899999999998865 99999999999999999999987655
Q ss_pred chh
Q 000789 1270 GAY 1272 (1283)
Q Consensus 1270 g~y 1272 (1283)
..|
T Consensus 227 ~~~ 229 (369)
T PRK11000 227 NRF 229 (369)
T ss_pred cHH
Confidence 444
No 244
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-41 Score=384.39 Aligned_cols=217 Identities=29% Similarity=0.528 Sum_probs=187.9
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHhcce
Q 000789 1039 AIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQM 1118 (1283)
Q Consensus 1039 ~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i 1118 (1283)
.|+++|++++|++. +.++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||.++...+...+|+++
T Consensus 7 ~l~~~nl~~~~~~~-~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~i 85 (271)
T PRK13632 7 MIKVENVSFSYPNS-ENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQSGEIKIDGITISKENLKEIRKKI 85 (271)
T ss_pred EEEEEeEEEEcCCC-CccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEecCcCCHHHHhcce
Confidence 48999999999632 34699999999999999999999999999999999999999999999999999887777889999
Q ss_pred EEEccCC--CCChhhHHHHHhcCCC-CCCCHH----HHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHH
Q 000789 1119 GLVSQEP--VLFNETIRTNIAYGKQ-GGATEE----EIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIA 1191 (1283)
Q Consensus 1119 ~~V~Qdp--~Lf~gTIreNl~~g~~-~~~sd~----ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiA 1191 (1283)
+||||+| .++..|++||+.++.. ...+.+ .+.++++..++.++..+. ..+||||||||++||
T Consensus 86 ~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrl~la 154 (271)
T PRK13632 86 GIIFQNPDNQFIGATVEDDIAFGLENKKVPPKKMKDIIDDLAKKVGMEDYLDKE-----------PQNLSGGQKQRVAIA 154 (271)
T ss_pred EEEEeCHHHhcCcccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhCC-----------cccCCHHHHHHHHHH
Confidence 9999998 4567899999986421 112333 245566666666554443 358999999999999
Q ss_pred HHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchHHhhcCEEEEEeCCEEEEecChHHHHhc
Q 000789 1192 RAVLKNPKILLLDEATSALDAESERVVQDALERVMV--NRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALMKI 1267 (1283)
Q Consensus 1192 RAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~~D~I~vl~~G~Ive~Gt~~eLl~~ 1267 (1283)
|||+++|++|||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+..||+|++|++|++++.|+++++.+.
T Consensus 155 ral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 232 (271)
T PRK13632 155 SVLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDEAILADKVIVFSEGKLIAQGKPKEILNN 232 (271)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhHHhhCCEEEEEECCEEEEecCHHHHhcC
Confidence 999999999999999999999999999999998753 4899999999999888999999999999999999988764
No 245
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=1.1e-41 Score=373.48 Aligned_cols=208 Identities=24% Similarity=0.476 Sum_probs=177.3
Q ss_pred EEEEEEEEECCCCCC-cccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHhcce
Q 000789 1040 IELRCVSFKYPTRPD-VQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQM 1118 (1283)
Q Consensus 1040 I~~~nVsf~Y~~~~~-~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i 1118 (1283)
|+++||+++|++... .++|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.+||.++.. ....+|+++
T Consensus 2 l~~~~v~~~~~~~~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-~~~~~~~~i 80 (218)
T cd03266 2 ITADALTKRFRDVKKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPDAGFATVDGFDVVK-EPAEARRRL 80 (218)
T ss_pred eEEEEEEEecCCCCccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEEccc-CHHHHHhhE
Confidence 789999999975311 169999999999999999999999999999999999999999999999999875 346778999
Q ss_pred EEEccCCCCChh-hHHHHHhcCCC-CCCC----HHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHHH
Q 000789 1119 GLVSQEPVLFNE-TIRTNIAYGKQ-GGAT----EEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIAR 1192 (1283)
Q Consensus 1119 ~~V~Qdp~Lf~g-TIreNl~~g~~-~~~s----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiAR 1192 (1283)
+|+||+|.+|.. |++||+.+... ...+ ++++.++++..++.+... ....+||||||||++|||
T Consensus 81 ~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrv~lar 149 (218)
T cd03266 81 GFVSDSTGLYDRLTARENLEYFAGLYGLKGDELTARLEELADRLGMEELLD-----------RRVGGFSTGMRQKVAIAR 149 (218)
T ss_pred EEecCCcccCcCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHHh-----------hhhhhcCHHHHHHHHHHH
Confidence 999999999985 99999975311 1122 234556666666654433 344589999999999999
Q ss_pred HHccCCCEEEEecccCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchHHhh-cCEEEEEeCCEEEEec
Q 000789 1193 AVLKNPKILLLDEATSALDAESERVVQDALERVM-VNRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQG 1259 (1283)
Q Consensus 1193 All~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~G 1259 (1283)
|++++|++|||||||++||+.+.+.+.+.|+++. +++|+|+|||+++.+.. ||++++|++|++++.|
T Consensus 150 al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~i~~~~ 218 (218)
T cd03266 150 ALVHDPPVLLLDEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQEVERLCDRVVVLHRGRVVYEG 218 (218)
T ss_pred HHhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhcCEEEEEECCEEeecC
Confidence 9999999999999999999999999999999875 47899999999998876 9999999999998865
No 246
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-41 Score=381.19 Aligned_cols=224 Identities=31% Similarity=0.542 Sum_probs=188.5
Q ss_pred cccEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCC-----CCCceEEECCcccCC--C
Q 000789 372 EGEIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYD-----PDAGEVLIDGIDIKK--L 444 (1283)
Q Consensus 372 ~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~~~g~~~~~--~ 444 (1283)
.+.|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|+++.. .
T Consensus 11 ~~~l~~~~l~~~~~~---~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~ 87 (260)
T PRK10744 11 PSKIQVRNLNFYYGK---FHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQ 87 (260)
T ss_pred CceEEEEEEEEEeCC---eEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEcccccc
Confidence 456999999999963 369999999999999999999999999999999999986 589999999999853 3
Q ss_pred CHHHHhcccEEEccCCCCCcccHHHHHhcCCC---CCCHH----HHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChH
Q 000789 445 QLKWIREKIGLVSQEPILFATSLRENIAYGKE---NATDQ----EIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGG 517 (1283)
Q Consensus 445 ~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~---~~~~~----~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgG 517 (1283)
+...+|++|+|++|++.+|+.|++||+.++.. ..+.+ ++.++++..++.+ ++.+..++...+||||
T Consensus 88 ~~~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~~~~~~~~~~~~LS~G 160 (260)
T PRK10744 88 DIALLRAKVGMVFQKPTPFPMSIYDNIAFGVRLFEKLSRAEMDERVEWALTKAALWN-------EVKDKLHQSGYSLSGG 160 (260)
T ss_pred chHHHhcceEEEecCCccCcCcHHHHHhhhHhhcCCCCHHHHHHHHHHHHHHcCCCh-------hhHHHHhcCCCCCCHH
Confidence 45677889999999999999999999987632 12222 2333343333221 1234566778899999
Q ss_pred HHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChh
Q 000789 518 QKQRIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMTSRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHD 596 (1283)
Q Consensus 518 qkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~ 596 (1283)
||||++|||||+.+|++|||||||++||+.+++.+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++
T Consensus 161 q~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 240 (260)
T PRK10744 161 QQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQDYTVVIVTHNMQQAARCSDYTAFMYLGELIEFGNTD 240 (260)
T ss_pred HHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999999998777899999999999865 9999999999999999999
Q ss_pred HHhcCCCCh
Q 000789 597 ELIKDPEGP 605 (1283)
Q Consensus 597 ~l~~~~~~~ 605 (1283)
++...+...
T Consensus 241 ~~~~~~~~~ 249 (260)
T PRK10744 241 TIFTKPAKK 249 (260)
T ss_pred HHHhCCCcH
Confidence 987653333
No 247
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-41 Score=386.93 Aligned_cols=220 Identities=28% Similarity=0.491 Sum_probs=184.9
Q ss_pred EEEEEEEEECCCCC--CCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCC---------
Q 000789 375 IELRDVYFRYPARP--EVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKK--------- 443 (1283)
Q Consensus 375 i~~~~v~f~y~~~~--~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~--------- 443 (1283)
|+++||+|+|++.. ..++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|+++|.++..
T Consensus 3 i~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 82 (305)
T PRK13651 3 IKVKNIVKIFNKKLPTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPDTGTIEWIFKDEKNKKKTKEKEK 82 (305)
T ss_pred EEEEEEEEEECCCCCccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEEeceecccccccccccc
Confidence 78999999997432 1359999999999999999999999999999999999999999999999877632
Q ss_pred ---------------CCHHHHhcccEEEccCC--CCCcccHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHHhCCCCcc
Q 000789 444 ---------------LQLKWIREKIGLVSQEP--ILFATSLRENIAYGKEN--ATDQEIRTAIELANAAKFIDKLPKGLD 504 (1283)
Q Consensus 444 ---------------~~~~~~r~~i~~v~Q~~--~l~~~ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~lp~g~~ 504 (1283)
.+...+++.||||+|+| .+|..||+|||.|+... .+.++..+. +.+.++.+ |++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~-----~~~~l~~~--gL~ 155 (305)
T PRK13651 83 VLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVSKEEAKKR-----AAKYIELV--GLD 155 (305)
T ss_pred cccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCCHHHHHHH-----HHHHHHHc--CCC
Confidence 13456788999999986 67888999999987432 233333221 22344444 664
Q ss_pred -ccccCCCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhh-ccCEE
Q 000789 505 -TMAGEHGTQLSGGQKQRIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIM-TSRTTVVVAHRLTTIR-NADLI 581 (1283)
Q Consensus 505 -t~~~~~g~~LSgGqkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~-~~d~i 581 (1283)
........+||||||||++|||||+.+|++|||||||++||+.+.+.+.+.|+++. .++|+|+|||+++.+. .||+|
T Consensus 156 ~~~~~~~~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd~~~~~~~adrv 235 (305)
T PRK13651 156 ESYLQRSPFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHDLDNVLEWTKRT 235 (305)
T ss_pred hhhhhCChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeCHHHHHHhCCEE
Confidence 45677788999999999999999999999999999999999999999999999875 4789999999999875 49999
Q ss_pred EEEeCCEEeEecChhHHhcC
Q 000789 582 AVVHQGKIVEKGTHDELIKD 601 (1283)
Q Consensus 582 ~vl~~G~i~~~g~~~~l~~~ 601 (1283)
++|++|+|++.|+++++..+
T Consensus 236 ~vl~~G~i~~~g~~~~~~~~ 255 (305)
T PRK13651 236 IFFKDGKIIKDGDTYDILSD 255 (305)
T ss_pred EEEECCEEEEECCHHHHhcC
Confidence 99999999999999998764
No 248
>cd03250 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=1.9e-41 Score=367.41 Aligned_cols=200 Identities=37% Similarity=0.563 Sum_probs=182.0
Q ss_pred EEEEEEEEECCCCCC--cccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHhcc
Q 000789 1040 IELRCVSFKYPTRPD--VQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQ 1117 (1283)
Q Consensus 1040 I~~~nVsf~Y~~~~~--~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~ 1117 (1283)
|+++||+++|++..+ +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+|| +
T Consensus 1 l~~~~l~~~~~~~~~~~~~il~~~s~~i~~G~~~~i~G~nG~GKSTLl~~i~G~~~~~~G~i~~~g-------------~ 67 (204)
T cd03250 1 ISVEDASFTWDSGEQETSFTLKDINLEVPKGELVAIVGPVGSGKSSLLSALLGELEKLSGSVSVPG-------------S 67 (204)
T ss_pred CEEeEEEEecCCCCccccceeeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCcCCCCCCeEEEcC-------------E
Confidence 579999999975311 3699999999999999999999999999999999999999999999999 6
Q ss_pred eEEEccCCCCChhhHHHHHhcCCCCCCCHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHHHHHccC
Q 000789 1118 MGLVSQEPVLFNETIRTNIAYGKQGGATEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKN 1197 (1283)
Q Consensus 1118 i~~V~Qdp~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiARAll~~ 1197 (1283)
|+|+||+|.+|++|++||+.++. ..++++..++++.+++.+++..+|.|+++.+.+.+.+||||||||++||||++.+
T Consensus 68 i~~~~q~~~l~~~t~~enl~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~lS~G~~qrv~laral~~~ 145 (204)
T cd03250 68 IAYVSQEPWIQNGTIRENILFGK--PFDEERYEKVIKACALEPDLEILPDGDLTEIGEKGINLSGGQKQRISLARAVYSD 145 (204)
T ss_pred EEEEecCchhccCcHHHHhccCC--CcCHHHHHHHHHHcCcHHHHHhccCcccceecCCCCcCCHHHHHHHHHHHHHhcC
Confidence 99999999999999999998862 3456678888999999999999999999999999999999999999999999999
Q ss_pred CCEEEEecccCCCCHHHHHHHHH-HHHHHc-CCceEEEEecCchHHhhcCEEEEEeCCE
Q 000789 1198 PKILLLDEATSALDAESERVVQD-ALERVM-VNRTTVVVAHRLTTIKNADIIAVVKNGV 1254 (1283)
Q Consensus 1198 p~ILiLDEaTSaLD~~te~~I~~-~L~~~~-~~~TvI~IaHrl~ti~~~D~I~vl~~G~ 1254 (1283)
|+++||||||++||+++.+.+.+ .+++.. +++|+|++||+++.+..||++++|++|+
T Consensus 146 p~llllDEP~~~LD~~~~~~l~~~ll~~~~~~~~tvi~~sh~~~~~~~~d~i~~l~~G~ 204 (204)
T cd03250 146 ADIYLLDDPLSAVDAHVGRHIFENCILGLLLNNKTRILVTHQLQLLPHADQIVVLDNGR 204 (204)
T ss_pred CCEEEEeCccccCCHHHHHHHHHHHHHHhccCCCEEEEEeCCHHHHhhCCEEEEEeCCC
Confidence 99999999999999999888877 456553 4689999999999998899999999985
No 249
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=4.4e-42 Score=365.29 Aligned_cols=226 Identities=38% Similarity=0.617 Sum_probs=195.6
Q ss_pred cEEEEEEEEECCCCCC---------------------CcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCc
Q 000789 374 EIELRDVYFRYPARPE---------------------VQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAG 432 (1283)
Q Consensus 374 ~i~~~~v~f~y~~~~~---------------------~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G 432 (1283)
.|+++||++-|+.++. .--++|+||+|+.||+..|.|-||||||||++++.|+++|+.|
T Consensus 4 ~i~i~nv~kiFG~~~~~a~~~~~~G~~k~ei~~~tg~vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiept~G 83 (386)
T COG4175 4 KIEIKNVYKIFGKNPKRALKLLDQGKSKAEILKKTGLVVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPTRG 83 (386)
T ss_pred eEEeecceeecccCHHHHHHHHHcCCcHHHHHHhhCcEEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCCCCc
Confidence 5889999988864311 1247899999999999999999999999999999999999999
Q ss_pred eEEECCcccCCCCHHHHh----cccEEEccCCCCCcc-cHHHHHhcCCCC--CC----HHHHHHHHHHhcHHHHHHhCCC
Q 000789 433 EVLIDGIDIKKLQLKWIR----EKIGLVSQEPILFAT-SLRENIAYGKEN--AT----DQEIRTAIELANAAKFIDKLPK 501 (1283)
Q Consensus 433 ~i~~~g~~~~~~~~~~~r----~~i~~v~Q~~~l~~~-ti~~ni~~~~~~--~~----~~~~~~~~~~~~~~~~i~~lp~ 501 (1283)
+|++||.|+..++.+.|| +++++|||+..||+- ||.||..||.+- .. .+...++++.+++++|-.+.|
T Consensus 84 ~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaLlPhrtVl~Nv~fGLev~Gv~~~er~~~a~~~l~~VgL~~~~~~yp- 162 (386)
T COG4175 84 EILVDGKDIAKLSAAELRELRRKKISMVFQSFALLPHRTVLENVAFGLEVQGVPKAEREERALEALELVGLEGYADKYP- 162 (386)
T ss_pred eEEECCcchhcCCHHHHHHHHhhhhhhhhhhhccccchhHhhhhhcceeecCCCHHHHHHHHHHHHHHcCchhhhhcCc-
Confidence 999999999999987764 589999999999975 999999999752 12 234556666777766666655
Q ss_pred CccccccCCCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhh-hcc
Q 000789 502 GLDTMAGEHGTQLSGGQKQRIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMT--SRTTVVVAHRLTTI-RNA 578 (1283)
Q Consensus 502 g~~t~~~~~g~~LSgGqkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~-~~~ 578 (1283)
.+||||+||||.|||||..||+||++|||+|||||--+..+|+.|.++.+ +||+|+|||++++. +-.
T Consensus 163 ----------~eLSGGMqQRVGLARAla~~~~IlLMDEaFSALDPLIR~~mQdeLl~Lq~~l~KTIvFitHDLdEAlriG 232 (386)
T COG4175 163 ----------NELSGGMQQRVGLARALANDPDILLMDEAFSALDPLIRTEMQDELLELQAKLKKTIVFITHDLDEALRIG 232 (386)
T ss_pred ----------ccccchHHHHHHHHHHHccCCCEEEecCchhhcChHHHHHHHHHHHHHHHHhCCeEEEEecCHHHHHhcc
Confidence 59999999999999999999999999999999999999999999988754 58999999999986 459
Q ss_pred CEEEEEeCCEEeEecChhHHhcCCCChhHHHH
Q 000789 579 DLIAVVHQGKIVEKGTHDELIKDPEGPYTQLV 610 (1283)
Q Consensus 579 d~i~vl~~G~i~~~g~~~~l~~~~~~~~~~~~ 610 (1283)
|||..|++|+|++.|||+|++.+|...|-.-+
T Consensus 233 ~rIaimkdG~ivQ~Gtp~eIl~~PAndYV~~F 264 (386)
T COG4175 233 DRIAIMKDGEIVQVGTPEEILLNPANDYVRDF 264 (386)
T ss_pred ceEEEecCCeEEEeCCHHHHHcCccHHHHHHH
Confidence 99999999999999999999998877776544
No 250
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=1.4e-41 Score=377.09 Aligned_cols=217 Identities=26% Similarity=0.492 Sum_probs=182.5
Q ss_pred EEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHhcceE
Q 000789 1040 IELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMG 1119 (1283)
Q Consensus 1040 I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~ 1119 (1283)
|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++.+.+.. .++.++
T Consensus 2 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~i~~~~~~-~~~~i~ 77 (236)
T TIGR03864 2 LEVAGLSFAYGA---RRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQEGQISVAGHDLRRAPRA-ALARLG 77 (236)
T ss_pred EEEEeeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccCChh-hhhhEE
Confidence 789999999973 3599999999999999999999999999999999999999999999999999876654 346899
Q ss_pred EEccCCCC-ChhhHHHHHhcCCC-CCCCHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHHHHHccC
Q 000789 1120 LVSQEPVL-FNETIRTNIAYGKQ-GGATEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKN 1197 (1283)
Q Consensus 1120 ~V~Qdp~L-f~gTIreNl~~g~~-~~~sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiARAll~~ 1197 (1283)
|+||++.+ +..|++||+.++.. ...+.++..+ .+.++++.+ |++........+||||||||++||||++++
T Consensus 78 ~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrl~laral~~~ 150 (236)
T TIGR03864 78 VVFQQPTLDLDLSVRQNLRYHAALHGLSRAEARE-----RIAALLARL--GLAERADDKVRELNGGHRRRVEIARALLHR 150 (236)
T ss_pred EeCCCCCCcccCcHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CChhhhcCChhhCCHHHHHHHHHHHHHhcC
Confidence 99999987 57899999976421 1222222111 122333333 444445555668999999999999999999
Q ss_pred CCEEEEecccCCCCHHHHHHHHHHHHHHc--CCceEEEEecCchHHhhcCEEEEEeCCEEEEecChHHHHhc
Q 000789 1198 PKILLLDEATSALDAESERVVQDALERVM--VNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALMKI 1267 (1283)
Q Consensus 1198 p~ILiLDEaTSaLD~~te~~I~~~L~~~~--~~~TvI~IaHrl~ti~~~D~I~vl~~G~Ive~Gt~~eLl~~ 1267 (1283)
|+||||||||++||+.+.+.+.+.|+++. +++|+|++||+++.+..||+|++|++|++++.|+++++.+.
T Consensus 151 p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 222 (236)
T TIGR03864 151 PALLLLDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVDEIEADDRLVVLHRGRVLADGAAAELRGA 222 (236)
T ss_pred CCEEEEcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChhhHhhCCEEEEEeCCeEEEeCCHHHHHHH
Confidence 99999999999999999999999999875 37899999999999988999999999999999999999864
No 251
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=1.1e-41 Score=374.91 Aligned_cols=217 Identities=29% Similarity=0.479 Sum_probs=182.0
Q ss_pred EEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHH-hccc
Q 000789 375 IELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWI-REKI 453 (1283)
Q Consensus 375 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~-r~~i 453 (1283)
|+++||+++|++ .++|+|+||++++||++||+||||||||||+++|+|+++|++|+|.++|.++...+.... ++++
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (222)
T cd03224 1 LEVENLNAGYGK---SQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSIRFDGRDITGLPPHERARAGI 77 (222)
T ss_pred CEEeeEEeecCC---eeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCCCCHHHHHhcCe
Confidence 578999999963 369999999999999999999999999999999999999999999999999987776544 6789
Q ss_pred EEEccCCCCCcc-cHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHhcCC
Q 000789 454 GLVSQEPILFAT-SLRENIAYGKENATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARAILKNP 532 (1283)
Q Consensus 454 ~~v~Q~~~l~~~-ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARal~~~~ 532 (1283)
+|++|++.+|+. |++||+.++.......+..+ .+.+.++.++ +++......+.+||||||||++|||||+.+|
T Consensus 78 ~~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~-----~~~~~l~~~~-~l~~~~~~~~~~LS~G~~qrv~laral~~~p 151 (222)
T cd03224 78 GYVPEGRRIFPELTVEENLLLGAYARRRAKRKA-----RLERVYELFP-RLKERRKQLAGTLSGGEQQMLAIARALMSRP 151 (222)
T ss_pred EEeccccccCCCCcHHHHHHHHhhhcCchhHHH-----HHHHHHHHHH-hhhhhhhCchhhCCHHHHHHHHHHHHHhcCC
Confidence 999999999986 99999998643221111111 1122233331 2344456677899999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHHhc
Q 000789 533 KILLLDEATSALDAESERIVQDALVKIM-TSRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDELIK 600 (1283)
Q Consensus 533 ~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~ 600 (1283)
++|||||||++||+.+...+.+.|+++. .++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 152 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 221 (222)
T cd03224 152 KLLLLDEPSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNARFALEIADRAYVLERGRVVLEGTAAELLA 221 (222)
T ss_pred CEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhccEEEEeeCCeEEEeCCHHHHhc
Confidence 9999999999999999999999999875 46899999999999866 99999999999999999888753
No 252
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-41 Score=381.97 Aligned_cols=224 Identities=29% Similarity=0.461 Sum_probs=188.5
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCC--C---CcceEEECCccCCC--CCh
Q 000789 1039 AIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYD--P---DSGHVLLDNIELPK--FKL 1111 (1283)
Q Consensus 1039 ~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~--~---~~G~I~idG~di~~--~~~ 1111 (1283)
-|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|+|+++ | ++|+|.+||.++.. .+.
T Consensus 12 ~l~i~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~ 88 (259)
T PRK14274 12 VYQINGMNLWYGQ---HHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDL 88 (259)
T ss_pred eEEEeeEEEEECC---eeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCH
Confidence 4899999999974 359999999999999999999999999999999999997 3 58999999999864 345
Q ss_pred HHHhcceEEEccCCCCChhhHHHHHhcCCC-CC-CCH----HHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHH
Q 000789 1112 SWLRQQMGLVSQEPVLFNETIRTNIAYGKQ-GG-ATE----EEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQK 1185 (1283)
Q Consensus 1112 ~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~-~~-~sd----~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQr 1185 (1283)
..+|+.++|+||++.+|..|++||+.++.. .. .++ +++.++++..++.+++. ......+.+||||||
T Consensus 89 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~l~~~~~~LS~Gq~ 161 (259)
T PRK14274 89 VELRKNIGMVFQKGNPFPQSIFDNVAYGPRIHGTKNKKKLQEIVEKSLKDVALWDEVK-------DRLHTQALSLSGGQQ 161 (259)
T ss_pred HHHhhceEEEecCCcccccCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhh-------hhhhCCcccCCHHHH
Confidence 677899999999999999999999986521 11 122 23445566666544332 223445568999999
Q ss_pred HHHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcCCceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHH
Q 000789 1186 QRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDAL 1264 (1283)
Q Consensus 1186 QRlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eL 1264 (1283)
||++||||++++|+||||||||++||+++...+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 162 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 241 (259)
T PRK14274 162 QRLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKEKYTIVIVTHNMQQAARVSDQTAFFYMGELVECNDTNKM 241 (259)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 9999999999999999999999999999999999999998778899999999999865 999999999999999999999
Q ss_pred HhccCchh
Q 000789 1265 MKITDGAY 1272 (1283)
Q Consensus 1265 l~~~~g~y 1272 (1283)
..++...|
T Consensus 242 ~~~~~~~~ 249 (259)
T PRK14274 242 FSNPDDQR 249 (259)
T ss_pred hhCCCCHH
Confidence 86544443
No 253
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.5e-41 Score=378.30 Aligned_cols=218 Identities=35% Similarity=0.572 Sum_probs=187.1
Q ss_pred EEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHHhcccE
Q 000789 375 IELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWIREKIG 454 (1283)
Q Consensus 375 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 454 (1283)
++++||+++|++. .++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.++
T Consensus 1 l~~~~l~~~~~~~--~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 78 (242)
T cd03295 1 IEFENVTKRYGGG--KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPTSGEIFIDGEDIREQDPVELRRKIG 78 (242)
T ss_pred CEEEEEEEEeCCc--ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCeEcCcCChHHhhcceE
Confidence 4689999999741 35999999999999999999999999999999999999999999999999998877777788999
Q ss_pred EEccCCCCCc-ccHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHHhCCCCccc--cccCCCCCCChHHHHHHHHHHHHh
Q 000789 455 LVSQEPILFA-TSLRENIAYGKEN--ATDQEIRTAIELANAAKFIDKLPKGLDT--MAGEHGTQLSGGQKQRIAIARAIL 529 (1283)
Q Consensus 455 ~v~Q~~~l~~-~ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~lp~g~~t--~~~~~g~~LSgGqkqriaiARal~ 529 (1283)
|++|++.+|. .|++||+.++... .+.++. ...+.+.++.+ |++. ...+.+.+||||||||++|||||+
T Consensus 79 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~-----~~~~~~~l~~l--~l~~~~~~~~~~~~LS~G~~qrv~laral~ 151 (242)
T cd03295 79 YVIQQIGLFPHMTVEENIALVPKLLKWPKEKI-----RERADELLALV--GLDPAEFADRYPHELSGGQQQRVGVARALA 151 (242)
T ss_pred EEccCccccCCCcHHHHHHHHHHHcCCCHHHH-----HHHHHHHHHHc--CCCcHHHHhcChhhCCHHHHHHHHHHHHHh
Confidence 9999999986 5999999875321 111111 12234555555 6654 567778899999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHHhcC
Q 000789 530 KNPKILLLDEATSALDAESERIVQDALVKIMT--SRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDELIKD 601 (1283)
Q Consensus 530 ~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~ 601 (1283)
++|++|||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 152 ~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 226 (242)
T cd03295 152 ADPPLLLMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDIDEAFRLADRIAIMKNGEIVQVGTPDEILRS 226 (242)
T ss_pred cCCCEEEecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHcC
Confidence 99999999999999999999999999998753 7899999999998765 999999999999999999988754
No 254
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.3e-41 Score=379.13 Aligned_cols=221 Identities=37% Similarity=0.549 Sum_probs=184.3
Q ss_pred EEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCC---HHHHhc
Q 000789 375 IELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQ---LKWIRE 451 (1283)
Q Consensus 375 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~---~~~~r~ 451 (1283)
++++||+++|+++ .++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|+++...+ ...+++
T Consensus 1 l~~~~l~~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 78 (241)
T cd03256 1 IEVENLSKTYPNG--KKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPTSGSVLIDGTDINKLKGKALRQLRR 78 (241)
T ss_pred CEEeeEEEecCCc--cEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEeccccCHhHHHHHHh
Confidence 4789999999641 46999999999999999999999999999999999999999999999999998776 456788
Q ss_pred ccEEEccCCCCCc-ccHHHHHhcCCCCCC--HHHH---HHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHH
Q 000789 452 KIGLVSQEPILFA-TSLRENIAYGKENAT--DQEI---RTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIA 525 (1283)
Q Consensus 452 ~i~~v~Q~~~l~~-~ti~~ni~~~~~~~~--~~~~---~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiA 525 (1283)
.++|++|++.+|. .|++||+.++..... ...+ ........+.+.++.+ |++......+.+||||||||++||
T Consensus 79 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~la 156 (241)
T cd03256 79 QIGMIFQQFNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERV--GLLDKAYQRADQLSGGQQQRVAIA 156 (241)
T ss_pred ccEEEcccCcccccCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHc--CChhhhCCCcccCCHHHHHHHHHH
Confidence 9999999998887 599999987542110 0000 0000111223445555 666666778889999999999999
Q ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc--CCCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHHh
Q 000789 526 RAILKNPKILLLDEATSALDAESERIVQDALVKIM--TSRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDELI 599 (1283)
Q Consensus 526 Ral~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~ 599 (1283)
|||+.+|++|||||||++||+.+.+.+.+.|+++. .++|+|++||+++.+.. ||++++|++|++++.|+++++.
T Consensus 157 ~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 233 (241)
T cd03256 157 RALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVDLAREYADRIVGLKDGRIVFDGPPAELT 233 (241)
T ss_pred HHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecCHHHhh
Confidence 99999999999999999999999999999999875 37899999999999984 9999999999999999988863
No 255
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=1.6e-41 Score=383.31 Aligned_cols=225 Identities=29% Similarity=0.442 Sum_probs=187.8
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChH---HHh
Q 000789 1039 AIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLS---WLR 1115 (1283)
Q Consensus 1039 ~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~---~lR 1115 (1283)
.|+++||+++|++ .++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.+||.++.+.+.. .+|
T Consensus 7 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~ 83 (269)
T PRK11831 7 LVDMRGVSFTRGN---RCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTVR 83 (269)
T ss_pred eEEEeCeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccChhhHHHHh
Confidence 4999999999963 3599999999999999999999999999999999999999999999999998776543 457
Q ss_pred cceEEEccCCCCChh-hHHHHHhcCCC--CCCCH----HHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHH
Q 000789 1116 QQMGLVSQEPVLFNE-TIRTNIAYGKQ--GGATE----EEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRI 1188 (1283)
Q Consensus 1116 ~~i~~V~Qdp~Lf~g-TIreNl~~g~~--~~~sd----~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRl 1188 (1283)
++++|+||++.+|.. |++||+.++.. ...+. +.+.++++..++.+.. .....+||||||||+
T Consensus 84 ~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-----------~~~~~~LSgGq~qrv 152 (269)
T PRK11831 84 KRMSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPLLHSTVMMKLEAVGLRGAA-----------KLMPSELSGGMARRA 152 (269)
T ss_pred hcEEEEecccccCCCCCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHcCChhhh-----------hCChhhCCHHHHHHH
Confidence 889999999999975 99999975311 11222 2344455555554332 223358999999999
Q ss_pred HHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHHH
Q 000789 1189 AIARAVLKNPKILLLDEATSALDAESERVVQDALERVMV--NRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDALM 1265 (1283)
Q Consensus 1189 aiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl 1265 (1283)
+|||||+++|++|||||||++||+.+.+.+.+.|+++.+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 153 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 232 (269)
T PRK11831 153 ALARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVPEVLSIADHAYIVADKKIVAHGSAQALQ 232 (269)
T ss_pred HHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhhCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999999998753 6899999999999876 9999999999999999999998
Q ss_pred hccCchhHHHHH
Q 000789 1266 KITDGAYASLVA 1277 (1283)
Q Consensus 1266 ~~~~g~y~~L~~ 1277 (1283)
+.+...+..++.
T Consensus 233 ~~~~~~~~~~~~ 244 (269)
T PRK11831 233 ANPDPRVRQFLD 244 (269)
T ss_pred cCCcHHHHHHHH
Confidence 754344455543
No 256
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-41 Score=381.92 Aligned_cols=224 Identities=30% Similarity=0.450 Sum_probs=188.1
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCC-----CcceEEECCccCCCC--Ch
Q 000789 1039 AIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDP-----DSGHVLLDNIELPKF--KL 1111 (1283)
Q Consensus 1039 ~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~-----~~G~I~idG~di~~~--~~ 1111 (1283)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.+||.++... +.
T Consensus 12 ~l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 88 (258)
T PRK14268 12 QIKVENLNLWYGE---KQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDV 88 (258)
T ss_pred eEEEeeeEEEeCC---eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchH
Confidence 5999999999973 3599999999999999999999999999999999999985 799999999998653 24
Q ss_pred HHHhcceEEEccCCCCChhhHHHHHhcCCC-CCCCH----HHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHH
Q 000789 1112 SWLRQQMGLVSQEPVLFNETIRTNIAYGKQ-GGATE----EEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQ 1186 (1283)
Q Consensus 1112 ~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~-~~~sd----~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQ 1186 (1283)
..+|+.++|+||++.+|..|++||+.++.. ...+. +++.++++.+++.+.+. .........|||||||
T Consensus 89 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSgG~~q 161 (258)
T PRK14268 89 VELRKNVGMVFQKPNPFPMSIYDNVAYGPRIHGANKKDLDGVVENALRSAALWDETS-------DRLKSPALSLSGGQQQ 161 (258)
T ss_pred HHHhhhEEEEecCCccCcccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcchh-------hhhcCChhhCCHHHHH
Confidence 567889999999999999999999986421 12232 23556666666543221 1223345689999999
Q ss_pred HHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcCCceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHHH
Q 000789 1187 RIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDALM 1265 (1283)
Q Consensus 1187 RlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl 1265 (1283)
|++|||||+++|+||||||||++||+.+...+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 162 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 241 (258)
T PRK14268 162 RLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKKDYTIVIVTHNMQQAARISDYTGFFLMGELIEFGQTRQIF 241 (258)
T ss_pred HHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999999999988778999999999999866 9999999999999999999998
Q ss_pred hccCchh
Q 000789 1266 KITDGAY 1272 (1283)
Q Consensus 1266 ~~~~g~y 1272 (1283)
+.+...|
T Consensus 242 ~~~~~~~ 248 (258)
T PRK14268 242 HNPREKS 248 (258)
T ss_pred cCCCCHH
Confidence 6544433
No 257
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.2e-42 Score=382.15 Aligned_cols=223 Identities=29% Similarity=0.482 Sum_probs=188.6
Q ss_pred EEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCC-----CCcceEEECCccCCCCC--hH
Q 000789 1040 IELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYD-----PDSGHVLLDNIELPKFK--LS 1112 (1283)
Q Consensus 1040 I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~-----~~~G~I~idG~di~~~~--~~ 1112 (1283)
-+++||+++|++ .++|+|+||+|++||+++|+|+||||||||+++|+|++. |++|+|.++|.++.+.+ ..
T Consensus 6 ~~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 82 (251)
T PRK14244 6 ASVKNLNLWYGS---KQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVV 82 (251)
T ss_pred EEeeeEEEEECC---eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchH
Confidence 478999999963 369999999999999999999999999999999999986 47999999999986543 34
Q ss_pred HHhcceEEEccCCCCChhhHHHHHhcCCC-CCC------CHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHH
Q 000789 1113 WLRQQMGLVSQEPVLFNETIRTNIAYGKQ-GGA------TEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQK 1185 (1283)
Q Consensus 1113 ~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~-~~~------sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQr 1185 (1283)
.+|+.++||||++.+|.+|++||+.++.. .+. .++++.++++..++.+.+. +.+...+.+||||||
T Consensus 83 ~~~~~i~~v~q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~Gq~ 155 (251)
T PRK14244 83 LLRAKVGMVFQKPNPFPKSIYDNVAYGPKLHGLAKNKKKLDEIVEKSLTSVGLWEELG-------DRLKDSAFELSGGQQ 155 (251)
T ss_pred HHhhhEEEEecCcccccCCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCchhh-------hHhhcChhhCCHHHH
Confidence 57889999999999999999999986411 111 1234566677766654321 233445668999999
Q ss_pred HHHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcCCceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHH
Q 000789 1186 QRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDAL 1264 (1283)
Q Consensus 1186 QRlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eL 1264 (1283)
||++||||++++|+||||||||++||+.+.+.+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 156 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 235 (251)
T PRK14244 156 QRLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELKKNFTIIVVTHSMKQAKKVSDRVAFFQSGRIVEYNTTQEI 235 (251)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhcCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998778999999999999875 999999999999999999999
Q ss_pred HhccCchh
Q 000789 1265 MKITDGAY 1272 (1283)
Q Consensus 1265 l~~~~g~y 1272 (1283)
.+.+...|
T Consensus 236 ~~~~~~~~ 243 (251)
T PRK14244 236 FKNPQSSK 243 (251)
T ss_pred hcCCCChH
Confidence 87655544
No 258
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-41 Score=389.85 Aligned_cols=227 Identities=27% Similarity=0.418 Sum_probs=188.9
Q ss_pred cEEEEEEEEECCCCC-------CcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCCh
Q 000789 1039 AIELRCVSFKYPTRP-------DVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKL 1111 (1283)
Q Consensus 1039 ~I~~~nVsf~Y~~~~-------~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~ 1111 (1283)
-|+++|++++|+.+. ...+|+||||+|++||++||||+||||||||+++|+|+++|++|+|.+||.|+.+.+.
T Consensus 5 ~l~v~nl~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~~G~i~~~g~~l~~~~~ 84 (327)
T PRK11308 5 LLQAIDLKKHYPVKRGLFKPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPTGGELYYQGQDLLKADP 84 (327)
T ss_pred eEEEeeeEEEEcCCCCccccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCCCcEEEECCEEcCcCCH
Confidence 489999999997421 2469999999999999999999999999999999999999999999999999988764
Q ss_pred ---HHHhcceEEEccCCC--CCh-hhHHHHHhcCC--CCCCC----HHHHHHHHHHhChHHHHHhCCCCcccccCCCCCC
Q 000789 1112 ---SWLRQQMGLVSQEPV--LFN-ETIRTNIAYGK--QGGAT----EEEIIAATEASNAHNFISALPHGYETNVGERGVQ 1179 (1283)
Q Consensus 1112 ---~~lR~~i~~V~Qdp~--Lf~-gTIreNl~~g~--~~~~s----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~ 1179 (1283)
..+|++|+||||+|. |+. .|+.+|+.... ....+ .+++.++++.+++.+ ..++. ....
T Consensus 85 ~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gL~~------~~~~~----~p~~ 154 (327)
T PRK11308 85 EAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLINTSLSAAERREKALAMMAKVGLRP------EHYDR----YPHM 154 (327)
T ss_pred HHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHCCCCh------HHhcC----CCcc
Confidence 356789999999993 554 58988885310 01122 234566677776642 12233 2357
Q ss_pred CChhHHHHHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchHHhh-cCEEEEEeCCEEE
Q 000789 1180 LSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMV--NRTTVVVAHRLTTIKN-ADIIAVVKNGVIA 1256 (1283)
Q Consensus 1180 LSgGQrQRlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~D~I~vl~~G~Iv 1256 (1283)
||||||||++|||||+.+|++||+||||++||..+...|.+.|+++.+ +.|+|+|||+++.+.. ||+|+||++|+|+
T Consensus 155 LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~adrv~vm~~G~iv 234 (327)
T PRK11308 155 FSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLSVVEHIADEVMVMYLGRCV 234 (327)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEE
Confidence 999999999999999999999999999999999999999999998753 7899999999999975 9999999999999
Q ss_pred EecChHHHHhccCchhHHH
Q 000789 1257 EQGSHDALMKITDGAYASL 1275 (1283)
Q Consensus 1257 e~Gt~~eLl~~~~g~y~~L 1275 (1283)
|.|+++++++.+...|.+.
T Consensus 235 e~g~~~~~~~~p~hpyt~~ 253 (327)
T PRK11308 235 EKGTKEQIFNNPRHPYTQA 253 (327)
T ss_pred EECCHHHHhcCCCCHHHHH
Confidence 9999999998656666653
No 259
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-41 Score=385.39 Aligned_cols=218 Identities=26% Similarity=0.473 Sum_probs=189.9
Q ss_pred cEEEEEEEEECCCCC---CcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCC-hHHH
Q 000789 1039 AIELRCVSFKYPTRP---DVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFK-LSWL 1114 (1283)
Q Consensus 1039 ~I~~~nVsf~Y~~~~---~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~-~~~l 1114 (1283)
-|+++||+++|++.. ..++|+|+||+|++||.++|+|+||||||||+++|.|+++|++|+|.+||.++.+.+ ...+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~ 83 (280)
T PRK13633 4 MIKCKNVSYKYESNEESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPSEGKVYVDGLDTSDEENLWDI 83 (280)
T ss_pred eEEEeeeEEEcCCCCCCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeccccccHHHH
Confidence 489999999997421 246999999999999999999999999999999999999999999999999987654 3567
Q ss_pred hcceEEEccCC--CCChhhHHHHHhcCCCC-CCC----HHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHH
Q 000789 1115 RQQMGLVSQEP--VLFNETIRTNIAYGKQG-GAT----EEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQR 1187 (1283)
Q Consensus 1115 R~~i~~V~Qdp--~Lf~gTIreNl~~g~~~-~~s----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQR 1187 (1283)
|++++||||+| .+|..|+.+|+.++... ..+ ++++.++++.+++.++..+.| .+||||||||
T Consensus 84 ~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----------~~LS~G~~qr 152 (280)
T PRK13633 84 RNKAGMVFQNPDNQIVATIVEEDVAFGPENLGIPPEEIRERVDESLKKVGMYEYRRHAP-----------HLLSGGQKQR 152 (280)
T ss_pred hhheEEEecChhhhhccccHHHHHHhhHhhcCCCHHHHHHHHHHHHHHCCCHhHhhCCc-----------ccCCHHHHHH
Confidence 89999999998 47777999999875211 122 345677788888877765544 4899999999
Q ss_pred HHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHc--CCceEEEEecCchHHhhcCEEEEEeCCEEEEecChHHHH
Q 000789 1188 IAIARAVLKNPKILLLDEATSALDAESERVVQDALERVM--VNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALM 1265 (1283)
Q Consensus 1188 laiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~--~~~TvI~IaHrl~ti~~~D~I~vl~~G~Ive~Gt~~eLl 1265 (1283)
++|||||+++|++|||||||++||+.+...+.+.|+++. .++|+|+|||+++.+..||++++|++|++++.|+++++.
T Consensus 153 v~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 232 (280)
T PRK13633 153 VAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYMEEAVEADRIIVMDSGKVVMEGTPKEIF 232 (280)
T ss_pred HHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChHHHhcCCEEEEEECCEEEEecCHHHHh
Confidence 999999999999999999999999999999999999875 378999999999999889999999999999999999997
Q ss_pred hc
Q 000789 1266 KI 1267 (1283)
Q Consensus 1266 ~~ 1267 (1283)
..
T Consensus 233 ~~ 234 (280)
T PRK13633 233 KE 234 (280)
T ss_pred cC
Confidence 64
No 260
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=6.3e-42 Score=374.83 Aligned_cols=203 Identities=30% Similarity=0.527 Sum_probs=171.4
Q ss_pred EEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHH---HHhc
Q 000789 375 IELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLK---WIRE 451 (1283)
Q Consensus 375 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~---~~r~ 451 (1283)
|+++|++++|++. .+++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+.. .+|+
T Consensus 2 l~~~~l~~~~~~~-~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (216)
T TIGR00960 2 IRFEQVSKAYPGG-HQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPTRGKIRFNGQDLTRLRGREIPFLRR 80 (216)
T ss_pred eEEEEEEEEecCC-CeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEehhhcChhHHHHHHH
Confidence 7899999999642 23599999999999999999999999999999999999999999999999998766543 3678
Q ss_pred ccEEEccCCCCCc-ccHHHHHhcCCCC--CC----HHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHH
Q 000789 452 KIGLVSQEPILFA-TSLRENIAYGKEN--AT----DQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAI 524 (1283)
Q Consensus 452 ~i~~v~Q~~~l~~-~ti~~ni~~~~~~--~~----~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriai 524 (1283)
+++|++|++.+|. .|++||+.++... .. ++++.++++.. |++........+||||||||++|
T Consensus 81 ~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~-----------~l~~~~~~~~~~LSgG~~qrv~l 149 (216)
T TIGR00960 81 HIGMVFQDHRLLSDRTVYDNVAFPLRIIGVPPRDANERVSAALEKV-----------GLEGKAHALPMQLSGGEQQRVAI 149 (216)
T ss_pred hceEEecCccccccccHHHHHHHHHHhcCCCHHHHHHHHHHHHHHc-----------CChhhhhCChhhCCHHHHHHHHH
Confidence 9999999999887 4999999875211 11 12233334333 44444455567899999999999
Q ss_pred HHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC-CCeEEEEecCchhhhc-cCEEEEEeCCEE
Q 000789 525 ARAILKNPKILLLDEATSALDAESERIVQDALVKIMT-SRTTVVVAHRLTTIRN-ADLIAVVHQGKI 589 (1283)
Q Consensus 525 ARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~-~~t~i~itH~l~~~~~-~d~i~vl~~G~i 589 (1283)
||||+.+|++|||||||++||+.+.+.+.+.|+++.+ ++|+|+|||+++.+.. ||+|++|++|+|
T Consensus 150 aral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i 216 (216)
T TIGR00960 150 ARAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDINLVETYRHRTLTLSRGRL 216 (216)
T ss_pred HHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 9999999999999999999999999999999998754 6899999999999875 999999999975
No 261
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=1.2e-41 Score=398.16 Aligned_cols=214 Identities=27% Similarity=0.495 Sum_probs=187.5
Q ss_pred cEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHHhccc
Q 000789 374 EIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWIREKI 453 (1283)
Q Consensus 374 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 453 (1283)
.|+++|++++|++ +++|+|+||+|++||+++|+||||||||||+|+|+|+++|++|+|.++|.++..++...++++|
T Consensus 3 ~L~~~nls~~y~~---~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~sG~I~l~G~~i~~~~~~~~~~~i 79 (402)
T PRK09536 3 MIDVSDLSVEFGD---TTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPTAGTVLVAGDDVEALSARAASRRV 79 (402)
T ss_pred eEEEeeEEEEECC---EEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCCCcEEEECCEEcCcCCHHHHhcce
Confidence 4899999999963 4699999999999999999999999999999999999999999999999999998888889999
Q ss_pred EEEccCCCC-CcccHHHHHhcCCCCC-------C---HHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHH
Q 000789 454 GLVSQEPIL-FATSLRENIAYGKENA-------T---DQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRI 522 (1283)
Q Consensus 454 ~~v~Q~~~l-~~~ti~~ni~~~~~~~-------~---~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri 522 (1283)
|||+|++.+ |+.|++||+.++.... + .+.+.++++.. |+.........+||||||||+
T Consensus 80 g~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~v-----------gl~~~~~~~~~~LSgGerQRv 148 (402)
T PRK09536 80 ASVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERT-----------GVAQFADRPVTSLSGGERQRV 148 (402)
T ss_pred EEEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHc-----------CCchhhcCChhhCCHHHHHHH
Confidence 999999987 5679999999875211 1 12334444444 444444555679999999999
Q ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHHhc
Q 000789 523 AIARAILKNPKILLLDEATSALDAESERIVQDALVKIM-TSRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDELIK 600 (1283)
Q Consensus 523 aiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~ 600 (1283)
+|||||+++|++|||||||++||+.+...+.+.|+++. +++|+|++||+++.+.. ||++++|++|++++.|++++++.
T Consensus 149 ~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~~~~~~adrii~l~~G~iv~~G~~~ev~~ 228 (402)
T PRK09536 149 LLARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLDLAARYCDELVLLADGRVRAAGPPADVLT 228 (402)
T ss_pred HHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHhC
Confidence 99999999999999999999999999999999999986 47899999999999965 99999999999999999999986
Q ss_pred C
Q 000789 601 D 601 (1283)
Q Consensus 601 ~ 601 (1283)
.
T Consensus 229 ~ 229 (402)
T PRK09536 229 A 229 (402)
T ss_pred c
Confidence 4
No 262
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-41 Score=383.09 Aligned_cols=214 Identities=30% Similarity=0.468 Sum_probs=188.3
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHhcce
Q 000789 1039 AIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQM 1118 (1283)
Q Consensus 1039 ~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i 1118 (1283)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++.+.+...+|+.+
T Consensus 11 ~l~i~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i 87 (265)
T PRK10575 11 TFALRNVSFRVPG---RTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKAFARKV 87 (265)
T ss_pred eEEEeeEEEEECC---EEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEehhhCCHHHHhhhe
Confidence 5999999999974 3699999999999999999999999999999999999999999999999999888888889999
Q ss_pred EEEccCCCCCh-hhHHHHHhcCCCC---------CCCHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHH
Q 000789 1119 GLVSQEPVLFN-ETIRTNIAYGKQG---------GATEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRI 1188 (1283)
Q Consensus 1119 ~~V~Qdp~Lf~-gTIreNl~~g~~~---------~~sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRl 1188 (1283)
+|+||++.++. .|++||+.++... ...++++.++++.+++.+++...| .+||||||||+
T Consensus 88 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LSgG~~qrv 156 (265)
T PRK10575 88 AYLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAHRLV-----------DSLSGGERQRA 156 (265)
T ss_pred EEeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCCc-----------ccCCHHHHHHH
Confidence 99999987665 5999999865210 112345777888888766544433 37999999999
Q ss_pred HHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHHH
Q 000789 1189 AIARAVLKNPKILLLDEATSALDAESERVVQDALERVMV--NRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDALM 1265 (1283)
Q Consensus 1189 aiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl 1265 (1283)
+||||++.+|+||||||||++||+.+.+.+.+.|+++.+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 157 ~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~~i~~~~d~i~~l~~G~i~~~~~~~~~~ 236 (265)
T PRK10575 157 WIAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDINMAARYCDYLVALRGGEMIAQGTPAELM 236 (265)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHhc
Confidence 999999999999999999999999999999999998753 7899999999999865 9999999999999999999987
Q ss_pred h
Q 000789 1266 K 1266 (1283)
Q Consensus 1266 ~ 1266 (1283)
.
T Consensus 237 ~ 237 (265)
T PRK10575 237 R 237 (265)
T ss_pred C
Confidence 5
No 263
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-41 Score=383.09 Aligned_cols=220 Identities=26% Similarity=0.447 Sum_probs=186.0
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCC-----CCcceEEECCccCCC--CCh
Q 000789 1039 AIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYD-----PDSGHVLLDNIELPK--FKL 1111 (1283)
Q Consensus 1039 ~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~-----~~~G~I~idG~di~~--~~~ 1111 (1283)
.|+++|++++|++ .++|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.+||.++.. .+.
T Consensus 21 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 97 (268)
T PRK14248 21 ILEVKDLSIYYGE---KRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILDSNINV 97 (268)
T ss_pred eEEEEEEEEEeCC---ceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEcccccccH
Confidence 5999999999974 359999999999999999999999999999999999865 789999999999864 344
Q ss_pred HHHhcceEEEccCCCCChhhHHHHHhcCCC--CCC----CHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHH
Q 000789 1112 SWLRQQMGLVSQEPVLFNETIRTNIAYGKQ--GGA----TEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQK 1185 (1283)
Q Consensus 1112 ~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~--~~~----sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQr 1185 (1283)
..+|++++|+||++.+|++|++||+.++.. ... .++.+.++++..++.+.+. ........+||||||
T Consensus 98 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSgGq~ 170 (268)
T PRK14248 98 VNLRREIGMVFQKPNPFPKSIYNNITHALKYAGERRKSVLDEIVEESLTKAALWDEVK-------DRLHSSALSLSGGQQ 170 (268)
T ss_pred HHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCCcchH-------HHHhcCcccCCHHHH
Confidence 567889999999999999999999986411 111 1234555666665532221 223345568999999
Q ss_pred HHHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcCCceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHH
Q 000789 1186 QRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDAL 1264 (1283)
Q Consensus 1186 QRlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eL 1264 (1283)
||++|||||+++|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 171 qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 250 (268)
T PRK14248 171 QRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKEEYSIIIVTHNMQQALRVSDRTAFFLNGDLVEYDQTEQI 250 (268)
T ss_pred HHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhcCCEEEEEEeCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998767899999999998865 999999999999999999999
Q ss_pred Hhcc
Q 000789 1265 MKIT 1268 (1283)
Q Consensus 1265 l~~~ 1268 (1283)
...+
T Consensus 251 ~~~~ 254 (268)
T PRK14248 251 FTSP 254 (268)
T ss_pred HhCC
Confidence 8653
No 264
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.3e-41 Score=376.82 Aligned_cols=220 Identities=37% Similarity=0.572 Sum_probs=185.9
Q ss_pred EEEEEEEEECCCCC-CCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHH---HHh
Q 000789 375 IELRDVYFRYPARP-EVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLK---WIR 450 (1283)
Q Consensus 375 i~~~~v~f~y~~~~-~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~---~~r 450 (1283)
|+++|++++|++.. ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+.. ..+
T Consensus 2 i~~~~l~~~~~~~~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (233)
T cd03258 2 IELKNVSKVFGDTGGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPTSGSVLVDGTDLTLLSGKELRKAR 81 (233)
T ss_pred eEEecceEEccCCCCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHH
Confidence 68999999997421 12699999999999999999999999999999999999999999999999998776543 347
Q ss_pred cccEEEccCCCCCc-ccHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHH
Q 000789 451 EKIGLVSQEPILFA-TSLRENIAYGKEN--ATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARA 527 (1283)
Q Consensus 451 ~~i~~v~Q~~~l~~-~ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARa 527 (1283)
+.++|++|++.+|. .|++||+.++... ....+. ...+++.++.+ |++........+||||||||++||||
T Consensus 82 ~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~la~a 154 (233)
T cd03258 82 RRIGMIFQHFNLLSSRTVFENVALPLEIAGVPKAEI-----EERVLELLELV--GLEDKADAYPAQLSGGQKQRVGIARA 154 (233)
T ss_pred hheEEEccCcccCCCCcHHHHHHHHHHHcCCCHHHH-----HHHHHHHHHHC--CChhhhhcChhhCCHHHHHHHHHHHH
Confidence 78999999999997 5999999875321 111111 11233455555 66666666778999999999999999
Q ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHHhcC
Q 000789 528 ILKNPKILLLDEATSALDAESERIVQDALVKIMT--SRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDELIKD 601 (1283)
Q Consensus 528 l~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~ 601 (1283)
|+.+|++|||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+.. ||++++|++|++++.|+++++.+.
T Consensus 155 l~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 231 (233)
T cd03258 155 LANNPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEMEVVKRICDRVAVMEKGEVVEEGTVEEVFAN 231 (233)
T ss_pred HhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhcC
Confidence 9999999999999999999999999999998753 6899999999999875 999999999999999999888653
No 265
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-41 Score=378.91 Aligned_cols=225 Identities=32% Similarity=0.494 Sum_probs=189.7
Q ss_pred ccEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCC-----CcceEEECCccCCC--CC
Q 000789 1038 GAIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDP-----DSGHVLLDNIELPK--FK 1110 (1283)
Q Consensus 1038 g~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~-----~~G~I~idG~di~~--~~ 1110 (1283)
|.|+++||+++|++ .++++|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.+||.++.+ .+
T Consensus 2 ~~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~ 78 (250)
T PRK14240 2 GKISVKDLDLFYGD---FQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDID 78 (250)
T ss_pred CeEEEEEEEEEECC---ceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccc
Confidence 46899999999974 3599999999999999999999999999999999999863 69999999999864 35
Q ss_pred hHHHhcceEEEccCCCCChhhHHHHHhcCCC-CCC-----CHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhH
Q 000789 1111 LSWLRQQMGLVSQEPVLFNETIRTNIAYGKQ-GGA-----TEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQ 1184 (1283)
Q Consensus 1111 ~~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~-~~~-----sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQ 1184 (1283)
...+|+.++||||++.+|+.|++||+.++.. ... .++++.++++.+++.+.+. ........+|||||
T Consensus 79 ~~~~~~~i~~~~q~~~~~~~t~~~ni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LS~G~ 151 (250)
T PRK14240 79 VNQLRKRVGMVFQQPNPFPMSIYDNVAYGPRTHGIKDKKKLDEIVEKSLKGAALWDEVK-------DRLKKSALGLSGGQ 151 (250)
T ss_pred hHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhhH-------HHHhcCCCCCCHHH
Confidence 5678899999999999999999999986521 111 1344556666666543332 22334556899999
Q ss_pred HHHHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcCCceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHH
Q 000789 1185 KQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDA 1263 (1283)
Q Consensus 1185 rQRlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~e 1263 (1283)
|||++||||++.+|++|||||||++||+.+...+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|++++
T Consensus 152 ~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~ 231 (250)
T PRK14240 152 QQRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELKKDYTIVIVTHNMQQASRISDKTAFFLNGEIVEFGDTVD 231 (250)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEEeCHHHHHhhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999988778899999999998866 99999999999999999999
Q ss_pred HHhccCchh
Q 000789 1264 LMKITDGAY 1272 (1283)
Q Consensus 1264 Ll~~~~g~y 1272 (1283)
+...+...+
T Consensus 232 ~~~~~~~~~ 240 (250)
T PRK14240 232 LFTNPKDKR 240 (250)
T ss_pred HHhCCCChH
Confidence 986544433
No 266
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.9e-41 Score=383.23 Aligned_cols=217 Identities=31% Similarity=0.527 Sum_probs=190.5
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCc---ceEEECCccCCCCChHHHh
Q 000789 1039 AIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDS---GHVLLDNIELPKFKLSWLR 1115 (1283)
Q Consensus 1039 ~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~---G~I~idG~di~~~~~~~lR 1115 (1283)
.|+++|++|+|++. ..++|+|+||+|++||++||+|+||||||||+++|+|+++|++ |+|.+||.++...+...+|
T Consensus 5 ~l~i~~l~~~~~~~-~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~~ 83 (282)
T PRK13640 5 IVEFKHVSFTYPDS-KKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDIR 83 (282)
T ss_pred eEEEEEEEEEcCCC-CccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHHH
Confidence 59999999999743 2359999999999999999999999999999999999999987 8999999999877777888
Q ss_pred cceEEEccCC--CCChhhHHHHHhcCCC-CCCCH----HHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHH
Q 000789 1116 QQMGLVSQEP--VLFNETIRTNIAYGKQ-GGATE----EEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRI 1188 (1283)
Q Consensus 1116 ~~i~~V~Qdp--~Lf~gTIreNl~~g~~-~~~sd----~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRl 1188 (1283)
++++||||+| .+++.|++|||.++.. ...+. +++.++++.+++.++....| .+||||||||+
T Consensus 84 ~~ig~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----------~~LS~G~~qrv 152 (282)
T PRK13640 84 EKVGIVFQNPDNQFVGATVGDDVAFGLENRAVPRPEMIKIVRDVLADVGMLDYIDSEP-----------ANLSGGQKQRV 152 (282)
T ss_pred hheEEEEECHHHhhccCCHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCChhHhcCCc-----------ccCCHHHHHHH
Confidence 9999999998 4678899999987521 12333 34667777777776655444 48999999999
Q ss_pred HHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchHHhhcCEEEEEeCCEEEEecChHHHHh
Q 000789 1189 AIARAVLKNPKILLLDEATSALDAESERVVQDALERVMV--NRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALMK 1266 (1283)
Q Consensus 1189 aiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~~D~I~vl~~G~Ive~Gt~~eLl~ 1266 (1283)
+|||||+.+|++|||||||++||+.+...+.+.|+++.+ ++|+|++||+++.+..||+|++|++|++++.|+++++..
T Consensus 153 ~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 232 (282)
T PRK13640 153 AIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDIDEANMADQVLVLDDGKLLAQGSPVEIFS 232 (282)
T ss_pred HHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 999999999999999999999999999999999998753 789999999999998899999999999999999998875
Q ss_pred c
Q 000789 1267 I 1267 (1283)
Q Consensus 1267 ~ 1267 (1283)
.
T Consensus 233 ~ 233 (282)
T PRK13640 233 K 233 (282)
T ss_pred C
Confidence 3
No 267
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-41 Score=396.57 Aligned_cols=206 Identities=34% Similarity=0.560 Sum_probs=178.6
Q ss_pred ccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHH----hcceEEEccCCCCCh-h
Q 000789 1056 QIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWL----RQQMGLVSQEPVLFN-E 1130 (1283)
Q Consensus 1056 ~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~l----R~~i~~V~Qdp~Lf~-g 1130 (1283)
.+|+|+||+|++||+++|+||||||||||+++|.|+++|++|+|.+||.++.+.+...+ |++++||||++.+|. .
T Consensus 42 ~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l~~~~ 121 (400)
T PRK10070 42 LGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPHM 121 (400)
T ss_pred EEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcCCCCC
Confidence 37999999999999999999999999999999999999999999999999988876554 468999999999986 5
Q ss_pred hHHHHHhcCCC-CCCC----HHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHHHHHccCCCEEEEec
Q 000789 1131 TIRTNIAYGKQ-GGAT----EEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDE 1205 (1283)
Q Consensus 1131 TIreNl~~g~~-~~~s----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiARAll~~p~ILiLDE 1205 (1283)
|++||+.++.. ...+ ++++.++++.+++.++..+.| .+||||||||++|||||+.+|+||||||
T Consensus 122 Tv~enl~~~~~~~~~~~~~~~~~~~e~L~~~gL~~~~~~~~-----------~~LSgGq~QRv~LArAL~~~P~iLLLDE 190 (400)
T PRK10070 122 TVLDNTAFGMELAGINAEERREKALDALRQVGLENYAHSYP-----------DELSGGMRQRVGLARALAINPDILLMDE 190 (400)
T ss_pred CHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCChhhhcCc-----------ccCCHHHHHHHHHHHHHhcCCCEEEEEC
Confidence 99999987521 1122 345667777777766655544 4899999999999999999999999999
Q ss_pred ccCCCCHHHHHHHHHHHHHHc--CCceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHHHhccCchh
Q 000789 1206 ATSALDAESERVVQDALERVM--VNRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDALMKITDGAY 1272 (1283)
Q Consensus 1206 aTSaLD~~te~~I~~~L~~~~--~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl~~~~g~y 1272 (1283)
|||+||+.+.+.+++.|+++. .++|+|+|||+++.+.. ||+|++|++|++++.|++++++..+...|
T Consensus 191 Pts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~~~~~~~Dri~vL~~G~i~~~g~~~~l~~~~~~~~ 260 (400)
T PRK10070 191 AFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLDEAMRIGDRIAIMQNGEVVQVGTPDEILNNPANDY 260 (400)
T ss_pred CCccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHHHHHHhCCEEEEEECCEEEecCCHHHHHhCcccHH
Confidence 999999999999999999874 37899999999998865 99999999999999999999987654444
No 268
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-41 Score=381.63 Aligned_cols=222 Identities=32% Similarity=0.509 Sum_probs=188.8
Q ss_pred ccEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCC-----CCcceEEECCccCCC--CC
Q 000789 1038 GAIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYD-----PDSGHVLLDNIELPK--FK 1110 (1283)
Q Consensus 1038 g~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~-----~~~G~I~idG~di~~--~~ 1110 (1283)
..|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.+||.++.. .+
T Consensus 12 ~~l~i~nl~~~~~~---~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~~~ 88 (269)
T PRK14259 12 IIISLQNVTISYGT---FEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPRVD 88 (269)
T ss_pred ceEEEEeEEEEECC---EEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccCC
Confidence 35999999999974 359999999999999999999999999999999999987 689999999999863 45
Q ss_pred hHHHhcceEEEccCCCCChhhHHHHHhcCCC-CCC---CHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHH
Q 000789 1111 LSWLRQQMGLVSQEPVLFNETIRTNIAYGKQ-GGA---TEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQ 1186 (1283)
Q Consensus 1111 ~~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~-~~~---sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQ 1186 (1283)
...+|+.++||||++.+|..|++||+.++.. ... .++++.++++.+++.+.+ +........+|||||||
T Consensus 89 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-------~~~~~~~~~~LS~G~~q 161 (269)
T PRK14259 89 PVEVRRRIGMVFQQPNPFPKSIYENIAFGARINGYTGDMDELVERSLRKAAVWDEC-------KDKLNESGYSLSGGQQQ 161 (269)
T ss_pred HHHHhhceEEEccCCccchhhHHHHHhhhhhhcCCcHHHHHHHHHHHHHhCCcchh-------hhhhCCCcccCCHHHHH
Confidence 6778899999999999998999999987521 111 134456667666654322 22334455689999999
Q ss_pred HHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcCCceEEEEecCchHHhh-cCEEEEEeC-----------CE
Q 000789 1187 RIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKN-ADIIAVVKN-----------GV 1254 (1283)
Q Consensus 1187 RlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~D~I~vl~~-----------G~ 1254 (1283)
|++|||||+++|++|||||||++||+.+...+.+.|+++.+++|+|+|||+++.+.. ||++++|++ |+
T Consensus 162 rl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~~~~~~~~~g~~g~ 241 (269)
T PRK14259 162 RLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKKNFTIVIVTHNMQQAVRVSDMTAFFNAEEVEGGSGGKVGY 241 (269)
T ss_pred HHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeccccccccccccce
Confidence 999999999999999999999999999999999999998777899999999998865 999999996 67
Q ss_pred EEEecChHHHHhccC
Q 000789 1255 IAEQGSHDALMKITD 1269 (1283)
Q Consensus 1255 Ive~Gt~~eLl~~~~ 1269 (1283)
++|.|++++++..+.
T Consensus 242 ~~~~~~~~~~~~~~~ 256 (269)
T PRK14259 242 LVEFNETKKIFNSPK 256 (269)
T ss_pred EEEeCCHHHHHhCcC
Confidence 999999999986533
No 269
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=1.4e-41 Score=369.85 Aligned_cols=204 Identities=25% Similarity=0.417 Sum_probs=179.4
Q ss_pred EEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHhcceE
Q 000789 1040 IELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMG 1119 (1283)
Q Consensus 1040 I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~ 1119 (1283)
|+++||+++|++ .++|+|+||+|++||.++|+|+||||||||+++|+|+++|++|+|.+||.++.+. ..+|++++
T Consensus 1 l~~~~l~~~~~~---~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~--~~~~~~i~ 75 (208)
T cd03268 1 LKTNDLTKTYGK---KRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPDSGEITFDGKSYQKN--IEALRRIG 75 (208)
T ss_pred CEEEEEEEEECC---eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCCcccch--HHHHhhEE
Confidence 578999999963 3699999999999999999999999999999999999999999999999988764 56788999
Q ss_pred EEccCCCCC-hhhHHHHHhcCCC-CCCCHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHHHHHccC
Q 000789 1120 LVSQEPVLF-NETIRTNIAYGKQ-GGATEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKN 1197 (1283)
Q Consensus 1120 ~V~Qdp~Lf-~gTIreNl~~g~~-~~~sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiARAll~~ 1197 (1283)
||||++.+| +.|++||+.++.. ...+++++.++++..++.+...+. ...||||||||++||||++++
T Consensus 76 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrv~la~al~~~ 144 (208)
T cd03268 76 ALIEAPGFYPNLTARENLRLLARLLGIRKKRIDEVLDVVGLKDSAKKK-----------VKGFSLGMKQRLGIALALLGN 144 (208)
T ss_pred EecCCCccCccCcHHHHHHHHHHhcCCcHHHHHHHHHHcCCHHHHhhh-----------HhhCCHHHHHHHHHHHHHhcC
Confidence 999999877 5799999976421 123566788888888887665432 347999999999999999999
Q ss_pred CCEEEEecccCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchHHhh-cCEEEEEeCCEEEEec
Q 000789 1198 PKILLLDEATSALDAESERVVQDALERVM-VNRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQG 1259 (1283)
Q Consensus 1198 p~ILiLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~G 1259 (1283)
|++|||||||++||+.+.+.+.+.|++.. +++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 145 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~g~i~~~g 208 (208)
T cd03268 145 PDLLILDEPTNGLDPDGIKELRELILSLRDQGITVLISSHLLSEIQKVADRIGIINKGKLIEEG 208 (208)
T ss_pred CCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecC
Confidence 99999999999999999999999999875 47899999999999876 9999999999999875
No 270
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-41 Score=381.66 Aligned_cols=220 Identities=27% Similarity=0.443 Sum_probs=189.5
Q ss_pred ccEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCC-----CCcceEEECCccCCC--CC
Q 000789 1038 GAIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYD-----PDSGHVLLDNIELPK--FK 1110 (1283)
Q Consensus 1038 g~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~-----~~~G~I~idG~di~~--~~ 1110 (1283)
..|+++||+++|++ .++|+|+||+|++||.+||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+
T Consensus 19 ~~l~~~nl~~~~~~---~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~ 95 (267)
T PRK14237 19 IALSTKDLHVYYGK---KEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEIN 95 (267)
T ss_pred eEEEEeeEEEEECC---eeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccCC
Confidence 46999999999963 469999999999999999999999999999999999997 589999999999864 34
Q ss_pred hHHHhcceEEEccCCCCChhhHHHHHhcCCC-CCC-C----HHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhH
Q 000789 1111 LSWLRQQMGLVSQEPVLFNETIRTNIAYGKQ-GGA-T----EEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQ 1184 (1283)
Q Consensus 1111 ~~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~-~~~-s----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQ 1184 (1283)
...+|+.++||||++.+|..|++||+.++.. ... + ++++.++++..++.+++. +........|||||
T Consensus 96 ~~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~-------~~~~~~~~~LS~G~ 168 (267)
T PRK14237 96 VYEMRKHIGMVFQRPNPFAKSIYENITFALERAGVKDKKVLDEIVETSLKQAALWDQVK-------DDLHKSALTLSGGQ 168 (267)
T ss_pred hHHHhcceEEEecCCccccccHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCchhh-------hhhcCCcccCCHHH
Confidence 5677899999999999999999999986421 111 2 234566677777654432 23445667899999
Q ss_pred HHHHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcCCceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHH
Q 000789 1185 KQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDA 1263 (1283)
Q Consensus 1185 rQRlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~e 1263 (1283)
|||++||||++++|++|||||||++||+.+...+.+.|+++.++.|+|+|||+++.+.. ||+|++|++|++++.|++++
T Consensus 169 ~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 248 (267)
T PRK14237 169 QQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELKKNYTIIIVTHNMQQAARASDYTAFFYLGDLIEYDKTRN 248 (267)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhcCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999998777899999999998865 99999999999999999999
Q ss_pred HHhc
Q 000789 1264 LMKI 1267 (1283)
Q Consensus 1264 Ll~~ 1267 (1283)
+.+.
T Consensus 249 ~~~~ 252 (267)
T PRK14237 249 IFTN 252 (267)
T ss_pred HhcC
Confidence 9764
No 271
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=1.6e-41 Score=388.40 Aligned_cols=214 Identities=26% Similarity=0.457 Sum_probs=183.9
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHhcce
Q 000789 1039 AIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQM 1118 (1283)
Q Consensus 1039 ~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i 1118 (1283)
.|+++||+++|++ ..+|+||||+|++||++||+||||||||||+++|+|+++|++|+|.++|.|+...+ ...|++|
T Consensus 7 ~i~i~~l~k~~~~---~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~~G~v~i~G~~~~~~~-~~~~~~i 82 (306)
T PRK13537 7 PIDFRNVEKRYGD---KLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPDAGSISLCGEPVPSRA-RHARQRV 82 (306)
T ss_pred eEEEEeEEEEECC---eEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEecccch-HHHHhcE
Confidence 5999999999973 46999999999999999999999999999999999999999999999999997654 4578999
Q ss_pred EEEccCCCCCh-hhHHHHHhcC-CCCCCCHHH----HHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHHH
Q 000789 1119 GLVSQEPVLFN-ETIRTNIAYG-KQGGATEEE----IIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIAR 1192 (1283)
Q Consensus 1119 ~~V~Qdp~Lf~-gTIreNl~~g-~~~~~sd~e----i~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiAR 1192 (1283)
+||||++.+|. .|++||+.+. .....+..+ +.++++..++ +...++.++ +||||||||++|||
T Consensus 83 g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l-------~~~~~~~~~----~LS~G~~qrl~la~ 151 (306)
T PRK13537 83 GVVPQFDNLDPDFTVRENLLVFGRYFGLSAAAARALVPPLLEFAKL-------ENKADAKVG----ELSGGMKRRLTLAR 151 (306)
T ss_pred EEEeccCcCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCC-------chHhcCchh----hCCHHHHHHHHHHH
Confidence 99999999885 6999999752 111223332 3344444443 334455554 79999999999999
Q ss_pred HHccCCCEEEEecccCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHHHhc
Q 000789 1193 AVLKNPKILLLDEATSALDAESERVVQDALERVM-VNRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDALMKI 1267 (1283)
Q Consensus 1193 All~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl~~ 1267 (1283)
||+.+|++|||||||++||+.+.+.+++.|+++. +++|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 152 aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 228 (306)
T PRK13537 152 ALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFMEEAERLCDRLCVIEEGRKIAEGAPHALIES 228 (306)
T ss_pred HHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHhc
Confidence 9999999999999999999999999999999875 47899999999999976 999999999999999999999764
No 272
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-41 Score=381.95 Aligned_cols=220 Identities=33% Similarity=0.526 Sum_probs=186.2
Q ss_pred cccEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCC-----CCceEEECCcccCC--C
Q 000789 372 EGEIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDP-----DAGEVLIDGIDIKK--L 444 (1283)
Q Consensus 372 ~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~~--~ 444 (1283)
.+.|+++||+++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|+++|+++.. .
T Consensus 17 ~~~l~~~nl~~~~~~---~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~ 93 (267)
T PRK14235 17 EIKMRARDVSVFYGE---KQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRL 93 (267)
T ss_pred CceEEEEeEEEEECC---EEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECccccc
Confidence 457999999999963 3699999999999999999999999999999999999975 89999999999864 3
Q ss_pred CHHHHhcccEEEccCCCCCcccHHHHHhcCCC--CC--CH----HHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCCh
Q 000789 445 QLKWIREKIGLVSQEPILFATSLRENIAYGKE--NA--TD----QEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSG 516 (1283)
Q Consensus 445 ~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~--~~--~~----~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSg 516 (1283)
+...+|+.++|++|++.+|+.|+.||+.++.. .. +. +++.++++..++.+++ .+..+..+.+|||
T Consensus 94 ~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LSg 166 (267)
T PRK14235 94 DVVELRARVGMVFQKPNPFPKSIYENVAYGPRIHGLARSKAELDEIVETSLRKAGLWEEV-------KDRLHEPGTGLSG 166 (267)
T ss_pred chHHHhhceEEEecCCCCCCCcHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCchhh-------hHHhhCCcccCCH
Confidence 45567889999999999998899999987531 10 11 2233344443332221 1244567789999
Q ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhc-cCEEEEEeCCEEeEecCh
Q 000789 517 GQKQRIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMTSRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTH 595 (1283)
Q Consensus 517 GqkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~ 595 (1283)
|||||++|||||+.+|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|++
T Consensus 167 Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~~~tiiivtH~~~~~~~~~d~v~~l~~G~i~~~g~~ 246 (267)
T PRK14235 167 GQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQNYTIVIVTHSMQQAARVSQRTAFFHLGNLVEVGDT 246 (267)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhcCCeEEEEEcCHHHHHhhCCEEEEEECCEEEEeCCH
Confidence 9999999999999999999999999999999999999999998777899999999999865 999999999999999999
Q ss_pred hHHhcC
Q 000789 596 DELIKD 601 (1283)
Q Consensus 596 ~~l~~~ 601 (1283)
+++...
T Consensus 247 ~~~~~~ 252 (267)
T PRK14235 247 EKMFTN 252 (267)
T ss_pred HHHHhC
Confidence 998765
No 273
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-41 Score=379.60 Aligned_cols=221 Identities=27% Similarity=0.430 Sum_probs=186.5
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCC--C---CcceEEECCccCCCC--Ch
Q 000789 1039 AIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYD--P---DSGHVLLDNIELPKF--KL 1111 (1283)
Q Consensus 1039 ~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~--~---~~G~I~idG~di~~~--~~ 1111 (1283)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++ | ++|+|.+||.++... +.
T Consensus 5 ~l~~~~l~~~~~~---~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~ 81 (252)
T PRK14239 5 ILQVSDLSVYYNK---KKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDT 81 (252)
T ss_pred eEEEEeeEEEECC---eeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccch
Confidence 4899999999974 359999999999999999999999999999999999954 6 489999999998643 34
Q ss_pred HHHhcceEEEccCCCCChhhHHHHHhcCCC--CCC----CHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHH
Q 000789 1112 SWLRQQMGLVSQEPVLFNETIRTNIAYGKQ--GGA----TEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQK 1185 (1283)
Q Consensus 1112 ~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~--~~~----sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQr 1185 (1283)
..+|+.++||||++.+|+.|++||+.++.. +.. .++++.++++.+++.+.+. +.......+||||||
T Consensus 82 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G~~ 154 (252)
T PRK14239 82 VDLRKEIGMVFQQPNPFPMSIYENVVYGLRLKGIKDKQVLDEAVEKSLKGASIWDEVK-------DRLHDSALGLSGGQQ 154 (252)
T ss_pred HhhhhcEEEEecCCccCcCcHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCchhHH-------HHHhcCcccCCHHHH
Confidence 567889999999999999999999986411 111 1234555666666544332 223445568999999
Q ss_pred HHHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcCCceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHH
Q 000789 1186 QRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDAL 1264 (1283)
Q Consensus 1186 QRlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eL 1264 (1283)
||++||||++++|++|||||||++||+++...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 155 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 234 (252)
T PRK14239 155 QRVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKDDYTMLLVTRSMQQASRISDRTGFFLDGDLIEYNDTKQM 234 (252)
T ss_pred HHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhhCCeEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998767999999999998865 999999999999999999999
Q ss_pred HhccC
Q 000789 1265 MKITD 1269 (1283)
Q Consensus 1265 l~~~~ 1269 (1283)
.+.+.
T Consensus 235 ~~~~~ 239 (252)
T PRK14239 235 FMNPK 239 (252)
T ss_pred HhCCC
Confidence 87533
No 274
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-41 Score=380.55 Aligned_cols=224 Identities=29% Similarity=0.455 Sum_probs=187.3
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCC-----CCcceEEECCccCCC--CCh
Q 000789 1039 AIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYD-----PDSGHVLLDNIELPK--FKL 1111 (1283)
Q Consensus 1039 ~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~-----~~~G~I~idG~di~~--~~~ 1111 (1283)
.|+++||+|+|+. .++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.+||+++.. .+.
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~~ 80 (251)
T PRK14251 4 IISAKDVHLSYGN---YEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMDL 80 (251)
T ss_pred eEEEEeeEEEECC---eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccchH
Confidence 4899999999974 359999999999999999999999999999999999997 479999999999854 344
Q ss_pred HHHhcceEEEccCCCCChhhHHHHHhcCCC-CCC-----CHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHH
Q 000789 1112 SWLRQQMGLVSQEPVLFNETIRTNIAYGKQ-GGA-----TEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQK 1185 (1283)
Q Consensus 1112 ~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~-~~~-----sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQr 1185 (1283)
..+|+.++|++|++.+|+.|++||+.++.. ... .++++.++++..++++.. + ........+||||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~---~----~~~~~~~~~LS~Gq~ 153 (251)
T PRK14251 81 VELRKEVGMVFQQPTPFPFSVYDNVAYGLKIAGVKDKELIDQRVEESLKQAAIWKET---K----DNLDRNAQAFSGGQQ 153 (251)
T ss_pred HHhhccEEEEecCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCCcch---H----HHhccChhhCCHHHH
Confidence 567889999999999999999999986421 111 123455566665553211 1 112344568999999
Q ss_pred HHHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcCCceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHH
Q 000789 1186 QRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDAL 1264 (1283)
Q Consensus 1186 QRlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eL 1264 (1283)
||++||||++++|++|||||||++||+++.+.+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 154 qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 233 (251)
T PRK14251 154 QRICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKHQYTFIMVTHNLQQAGRISDQTAFLMNGDLIEAGPTEEM 233 (251)
T ss_pred HHHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHcCCeEEEEECCHHHHHhhcCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998777899999999999876 999999999999999999999
Q ss_pred HhccCchh
Q 000789 1265 MKITDGAY 1272 (1283)
Q Consensus 1265 l~~~~g~y 1272 (1283)
...+...|
T Consensus 234 ~~~~~~~~ 241 (251)
T PRK14251 234 FIAPKKQI 241 (251)
T ss_pred HhCCCCHH
Confidence 76534333
No 275
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1). NFT1 belongs to the MRP (mulrtidrug resisitance-associated protein) family of ABC transporters. Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=3.8e-41 Score=365.92 Aligned_cols=203 Identities=36% Similarity=0.613 Sum_probs=180.4
Q ss_pred ccEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHHhcc
Q 000789 373 GEIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWIREK 452 (1283)
Q Consensus 373 ~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~ 452 (1283)
+.|+++|++++|++. ..++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++.+.+...+|+.
T Consensus 5 ~~l~~~~l~~~~~~~-~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~ 83 (207)
T cd03369 5 GEIEVENLSVRYAPD-LPPVLKNVSFKVKAGEKIGIVGRTGAGKSTLILALFRFLEAEEGKIEIDGIDISTIPLEDLRSS 83 (207)
T ss_pred CeEEEEEEEEEeCCC-CcccccCceEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEhHHCCHHHHHhh
Confidence 569999999999742 2369999999999999999999999999999999999999999999999999988888788889
Q ss_pred cEEEccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHhcCC
Q 000789 453 IGLVSQEPILFATSLRENIAYGKENATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARAILKNP 532 (1283)
Q Consensus 453 i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARal~~~~ 532 (1283)
|+||+|++.+|++|++||+.+... .+.+++.++++ +++++..||||||||++||||++.+|
T Consensus 84 i~~v~q~~~~~~~tv~~~l~~~~~-~~~~~~~~~l~------------------~~~~~~~LS~G~~qrv~laral~~~p 144 (207)
T cd03369 84 LTIIPQDPTLFSGTIRSNLDPFDE-YSDEEIYGALR------------------VSEGGLNLSQGQRQLLCLARALLKRP 144 (207)
T ss_pred EEEEecCCcccCccHHHHhcccCC-CCHHHHHHHhh------------------ccCCCCcCCHHHHHHHHHHHHHhhCC
Confidence 999999999999999999987542 33333333222 34567899999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhccCEEEEEeCCEEeEecCh
Q 000789 533 KILLLDEATSALDAESERIVQDALVKIMTSRTTVVVAHRLTTIRNADLIAVVHQGKIVEKGTH 595 (1283)
Q Consensus 533 ~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~ 595 (1283)
+++||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+..||++++|++|++++.|++
T Consensus 145 ~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~th~~~~~~~~d~v~~l~~g~i~~~g~~ 207 (207)
T cd03369 145 RVLVLDEATASIDYATDALIQKTIREEFTNSTILTIAHRLRTIIDYDKILVMDAGEVKEYDHP 207 (207)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEecCCC
Confidence 999999999999999999999999998778999999999999878999999999999988763
No 276
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-41 Score=396.82 Aligned_cols=221 Identities=29% Similarity=0.478 Sum_probs=187.1
Q ss_pred cEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHHhccc
Q 000789 374 EIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWIREKI 453 (1283)
Q Consensus 374 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 453 (1283)
.|+++|++++|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+.. +++|
T Consensus 3 ~l~i~~l~~~~~~---~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~~G~I~~~g~~i~~~~~~--~~~i 77 (369)
T PRK11000 3 SVTLRNVTKAYGD---VVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDITSGDLFIGEKRMNDVPPA--ERGV 77 (369)
T ss_pred EEEEEEEEEEeCC---eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHh--HCCE
Confidence 4899999999963 3599999999999999999999999999999999999999999999999999876543 5689
Q ss_pred EEEccCCCCCcc-cHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHhc
Q 000789 454 GLVSQEPILFAT-SLRENIAYGKEN--ATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARAILK 530 (1283)
Q Consensus 454 ~~v~Q~~~l~~~-ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARal~~ 530 (1283)
+||+|++.+|+. ||+||+.|+... .+.++..+ .+.+.++.+ |++........+||||||||++|||||+.
T Consensus 78 ~~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~-----~~~~~l~~l--gL~~~~~~~~~~LSgGq~QRvaLAraL~~ 150 (369)
T PRK11000 78 GMVFQSYALYPHLSVAENMSFGLKLAGAKKEEINQ-----RVNQVAEVL--QLAHLLDRKPKALSGGQRQRVAIGRTLVA 150 (369)
T ss_pred EEEeCCcccCCCCCHHHHHHhHHhhcCCCHHHHHH-----HHHHHHHHc--CChhhhcCChhhCCHHHHHHHHHHHHHhc
Confidence 999999999975 999999987431 12222111 122344444 56555666678999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHHhcCCCChh
Q 000789 531 NPKILLLDEATSALDAESERIVQDALVKIMT--SRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDELIKDPEGPY 606 (1283)
Q Consensus 531 ~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~~~~~~ 606 (1283)
+|++||||||||+||+.+++.+.+.|+++.+ +.|+|+|||+++.+.. ||+|++|++|+|++.|+++++...+...+
T Consensus 151 ~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~~~~~~~d~i~vl~~G~i~~~g~~~~i~~~p~~~~ 229 (369)
T PRK11000 151 EPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHYPANRF 229 (369)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCcccHH
Confidence 9999999999999999999999999998753 6899999999998865 99999999999999999999987654333
No 277
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.1e-41 Score=381.59 Aligned_cols=221 Identities=31% Similarity=0.498 Sum_probs=189.9
Q ss_pred cccEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCC-----CcceEEECCccCCC--C
Q 000789 1037 GGAIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDP-----DSGHVLLDNIELPK--F 1109 (1283)
Q Consensus 1037 ~g~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~-----~~G~I~idG~di~~--~ 1109 (1283)
.+.|+++||+++|++ .++|+|+||+|++||.++|+|+||||||||+++|+|+++| ++|+|.+||.++.. .
T Consensus 23 ~~~l~~~nl~~~~~~---~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g~~i~~~~~ 99 (272)
T PRK14236 23 QTALEVRNLNLFYGD---KQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDGQNIYDKKV 99 (272)
T ss_pred CcEEEEEEEEEEECC---eeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECCEECccccc
Confidence 346999999999964 3599999999999999999999999999999999999984 89999999999864 3
Q ss_pred ChHHHhcceEEEccCCCCChhhHHHHHhcCCC-CCC-C----HHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChh
Q 000789 1110 KLSWLRQQMGLVSQEPVLFNETIRTNIAYGKQ-GGA-T----EEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGG 1183 (1283)
Q Consensus 1110 ~~~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~-~~~-s----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgG 1183 (1283)
+...+|+.++|+||++.+|+.|++||+.++.. ... . ++++.++++.+++.+.+. +..+..+.+||||
T Consensus 100 ~~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G 172 (272)
T PRK14236 100 DVAELRRRVGMVFQRPNPFPKSIYENVVYGLRLQGINNRRVLDEAVERSLRGAALWDEVK-------DRLHENAFGLSGG 172 (272)
T ss_pred CHHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCChhHH-------HHhhCCcccCCHH
Confidence 45678899999999999999999999976411 111 1 234666777666654433 2344556789999
Q ss_pred HHHHHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcCCceEEEEecCchHHhh-cCEEEEEeCCEEEEecChH
Q 000789 1184 QKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHD 1262 (1283)
Q Consensus 1184 QrQRlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~ 1262 (1283)
||||++||||++++|+||||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++
T Consensus 173 q~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 252 (272)
T PRK14236 173 QQQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKSKYTIVIVTHNMQQAARVSDYTAFMYMGKLVEYGDTD 252 (272)
T ss_pred HHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEeCCHHHHHhhCCEEEEEECCEEEecCCHH
Confidence 999999999999999999999999999999999999999998778899999999999865 9999999999999999999
Q ss_pred HHHhc
Q 000789 1263 ALMKI 1267 (1283)
Q Consensus 1263 eLl~~ 1267 (1283)
++...
T Consensus 253 ~~~~~ 257 (272)
T PRK14236 253 TLFTS 257 (272)
T ss_pred HHhcC
Confidence 99864
No 278
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=1.2e-41 Score=369.20 Aligned_cols=200 Identities=28% Similarity=0.501 Sum_probs=174.0
Q ss_pred EEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHhcceEE
Q 000789 1041 ELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMGL 1120 (1283)
Q Consensus 1041 ~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~~ 1120 (1283)
+++||+++|++. .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||.++.. ..+|++++|
T Consensus 1 ~~~~l~~~~~~~--~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~---~~~~~~i~~ 75 (205)
T cd03226 1 RIENISFSYKKG--TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKESSGSILLNGKPIKA---KERRKSIGY 75 (205)
T ss_pred CcccEEEEeCCc--CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEhhh---HHhhcceEE
Confidence 368999999741 359999999999999999999999999999999999999999999999998854 456789999
Q ss_pred EccCC--CCChhhHHHHHhcCCCC-CCCHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHHHHHccC
Q 000789 1121 VSQEP--VLFNETIRTNIAYGKQG-GATEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKN 1197 (1283)
Q Consensus 1121 V~Qdp--~Lf~gTIreNl~~g~~~-~~sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiARAll~~ 1197 (1283)
+||+| .+|..|++||+.++... ...++++.++++..++.++..+.| ..||||||||++||||++++
T Consensus 76 ~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~laral~~~ 144 (205)
T cd03226 76 VMQDVDYQLFTDSVREELLLGLKELDAGNEQAETVLKDLDLYALKERHP-----------LSLSGGQKQRLAIAAALLSG 144 (205)
T ss_pred EecChhhhhhhccHHHHHhhhhhhcCccHHHHHHHHHHcCCchhcCCCc-----------hhCCHHHHHHHHHHHHHHhC
Confidence 99998 46789999999875221 122356788888888876654443 37999999999999999999
Q ss_pred CCEEEEecccCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchHHhh-cCEEEEEeCCEEE
Q 000789 1198 PKILLLDEATSALDAESERVVQDALERVM-VNRTTVVVAHRLTTIKN-ADIIAVVKNGVIA 1256 (1283)
Q Consensus 1198 p~ILiLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Iv 1256 (1283)
|++|||||||++||+.+.+.+.+.|+++. +++|+|++||+++.+.. ||+|++|++|+++
T Consensus 145 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~iv 205 (205)
T cd03226 145 KDLLIFDEPTSGLDYKNMERVGELIRELAAQGKAVIVITHDYEFLAKVCDRVLLLANGAIV 205 (205)
T ss_pred CCEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEC
Confidence 99999999999999999999999999873 57899999999999976 9999999999975
No 279
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-41 Score=384.06 Aligned_cols=223 Identities=35% Similarity=0.550 Sum_probs=182.3
Q ss_pred EEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHH----hc
Q 000789 376 ELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWI----RE 451 (1283)
Q Consensus 376 ~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~----r~ 451 (1283)
.++|+++.|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+ ++
T Consensus 26 ~~~~~~~~~~~---~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~~ 102 (269)
T cd03294 26 SKEEILKKTGQ---TVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQDIAAMSRKELRELRRK 102 (269)
T ss_pred hhhhhhhhcCC---ceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccChhhhhhhhcC
Confidence 46678888853 458999999999999999999999999999999999999999999999999987765443 46
Q ss_pred ccEEEccCCCCCc-ccHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHH
Q 000789 452 KIGLVSQEPILFA-TSLRENIAYGKEN--ATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARAI 528 (1283)
Q Consensus 452 ~i~~v~Q~~~l~~-~ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARal 528 (1283)
+++|++|++.+|. .|++||+.++... ....+..+ .+.+.++.+ |++..+.....+||||||||++|||||
T Consensus 103 ~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~Gq~qrv~lAral 175 (269)
T cd03294 103 KISMVFQSFALLPHRTVLENVAFGLEVQGVPRAEREE-----RAAEALELV--GLEGWEHKYPDELSGGMQQRVGLARAL 175 (269)
T ss_pred cEEEEecCcccCCCCcHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CCHhHhhCCcccCCHHHHHHHHHHHHH
Confidence 7999999999885 5999999875321 11111111 112333333 444444555678999999999999999
Q ss_pred hcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHHhcCCCCh
Q 000789 529 LKNPKILLLDEATSALDAESERIVQDALVKIMT--SRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDELIKDPEGP 605 (1283)
Q Consensus 529 ~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~~~~~ 605 (1283)
+++|+||||||||++||+.+.+.+.+.|.++.+ ++|+|++||+++.+.. ||++++|++|++++.|+++++++.+...
T Consensus 176 ~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~~~~~ 255 (269)
T cd03294 176 AVDPDILLMDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLDEALRLGDRIAIMKDGRLVQVGTPEEILTNPAND 255 (269)
T ss_pred hcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHHhCcCcH
Confidence 999999999999999999999999999998753 6899999999999865 9999999999999999999998764444
Q ss_pred hHH
Q 000789 606 YTQ 608 (1283)
Q Consensus 606 ~~~ 608 (1283)
|.+
T Consensus 256 ~~~ 258 (269)
T cd03294 256 YVR 258 (269)
T ss_pred HHH
Confidence 443
No 280
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-41 Score=379.58 Aligned_cols=222 Identities=28% Similarity=0.460 Sum_probs=187.4
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhcc---CCC--CcceEEECCccCCCC--Ch
Q 000789 1039 AIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERF---YDP--DSGHVLLDNIELPKF--KL 1111 (1283)
Q Consensus 1039 ~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl---~~~--~~G~I~idG~di~~~--~~ 1111 (1283)
.|+++|++++|++ .++|+|+||+|++||.+||+|+||||||||+++|.|+ ++| ++|+|.+||.++... +.
T Consensus 3 ~l~~~~~~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 79 (250)
T PRK14245 3 KIDARDVNFWYGD---FHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDKGVQV 79 (250)
T ss_pred EEEEEEEEEEECC---EeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEecccccccH
Confidence 4899999999974 3599999999999999999999999999999999997 444 589999999998754 34
Q ss_pred HHHhcceEEEccCCCCChhhHHHHHhcCCC-CCC-----CHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHH
Q 000789 1112 SWLRQQMGLVSQEPVLFNETIRTNIAYGKQ-GGA-----TEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQK 1185 (1283)
Q Consensus 1112 ~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~-~~~-----sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQr 1185 (1283)
..+|+.++||||++.+|..|++||+.++.. ... .++++.++++..++.+++. +.....+.+||||||
T Consensus 80 ~~~~~~i~~v~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G~~ 152 (250)
T PRK14245 80 DELRKNVGMVFQRPNPFPKSIFENVAYGLRVNGVKDNAFIRQRVEETLKGAALWDEVK-------DKLKESAFALSGGQQ 152 (250)
T ss_pred HHHhhheEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCcchh-------hhhhCCcccCCHHHH
Confidence 577889999999999999999999976421 111 1234556666666544332 233455678999999
Q ss_pred HHHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcCCceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHH
Q 000789 1186 QRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDAL 1264 (1283)
Q Consensus 1186 QRlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eL 1264 (1283)
||++||||++++|++|||||||++||+.+...+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 153 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~v~~l~~G~~~~~~~~~~~ 232 (250)
T PRK14245 153 QRLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELKKDYTIVIVTHNMQQAARVSDKTAFFYMGEMVEYDDTKKI 232 (250)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEECCHHHH
Confidence 9999999999999999999999999999999999999998778999999999999865 999999999999999999999
Q ss_pred HhccCc
Q 000789 1265 MKITDG 1270 (1283)
Q Consensus 1265 l~~~~g 1270 (1283)
.+.+..
T Consensus 233 ~~~~~~ 238 (250)
T PRK14245 233 FTNPEK 238 (250)
T ss_pred hcCCCC
Confidence 875333
No 281
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-41 Score=395.50 Aligned_cols=219 Identities=29% Similarity=0.496 Sum_probs=188.8
Q ss_pred ccEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHhcc
Q 000789 1038 GAIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQ 1117 (1283)
Q Consensus 1038 g~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~ 1117 (1283)
..|+++||+++|++ .++|+|+||+|++||.++|+||||||||||+++|.|+++|++|+|.+||.++.+.+. .|+.
T Consensus 18 ~~l~l~~v~~~~~~---~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~ 92 (377)
T PRK11607 18 PLLEIRNLTKSFDG---QHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPTAGQIMLDGVDLSHVPP--YQRP 92 (377)
T ss_pred ceEEEEeEEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCH--HHCC
Confidence 35999999999963 358999999999999999999999999999999999999999999999999987664 5789
Q ss_pred eEEEccCCCCChh-hHHHHHhcCCC-CCCCH----HHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHH
Q 000789 1118 MGLVSQEPVLFNE-TIRTNIAYGKQ-GGATE----EEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIA 1191 (1283)
Q Consensus 1118 i~~V~Qdp~Lf~g-TIreNl~~g~~-~~~sd----~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiA 1191 (1283)
++||+|++.+|.. |++|||.|+.. ...+. +++.++++..++.++..+.| .+||||||||+|||
T Consensus 93 ig~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~-----------~~LSgGq~QRVaLA 161 (377)
T PRK11607 93 INMMFQSYALFPHMTVEQNIAFGLKQDKLPKAEIASRVNEMLGLVHMQEFAKRKP-----------HQLSGGQRQRVALA 161 (377)
T ss_pred EEEEeCCCccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhcCCh-----------hhCCHHHHHHHHHH
Confidence 9999999999964 99999998632 12232 34556666666665544433 47999999999999
Q ss_pred HHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHc--CCceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHHHhcc
Q 000789 1192 RAVLKNPKILLLDEATSALDAESERVVQDALERVM--VNRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDALMKIT 1268 (1283)
Q Consensus 1192 RAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~--~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl~~~ 1268 (1283)
|||+++|++||||||||+||+.+...+.+.|+++. .+.|+|+|||+++.+.. ||+|++|++|++++.|+++|+..++
T Consensus 162 RAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~~~~~p 241 (377)
T PRK11607 162 RSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEIYEHP 241 (377)
T ss_pred HHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEeCCEEEEEcCHHHHHhCC
Confidence 99999999999999999999999999998887764 36899999999998765 9999999999999999999999876
Q ss_pred Cchh
Q 000789 1269 DGAY 1272 (1283)
Q Consensus 1269 ~g~y 1272 (1283)
...|
T Consensus 242 ~~~~ 245 (377)
T PRK11607 242 TTRY 245 (377)
T ss_pred ccHH
Confidence 6544
No 282
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=1.2e-41 Score=373.82 Aligned_cols=215 Identities=28% Similarity=0.503 Sum_probs=181.1
Q ss_pred EEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHHhcccE
Q 000789 375 IELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWIREKIG 454 (1283)
Q Consensus 375 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 454 (1283)
|+++||++.|++. ..++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.... ..++++++
T Consensus 1 l~~~~l~~~~~~~-~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~-~~~~~~i~ 78 (220)
T cd03263 1 LQIRNLTKTYKKG-TKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPTSGTAYINGYSIRTDR-KAARQSLG 78 (220)
T ss_pred CEEEeeEEEeCCC-CceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccch-HHHhhhEE
Confidence 5789999999642 146999999999999999999999999999999999999999999999999986543 56678899
Q ss_pred EEccCCCCC-cccHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHhcC
Q 000789 455 LVSQEPILF-ATSLRENIAYGKE--NATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARAILKN 531 (1283)
Q Consensus 455 ~v~Q~~~l~-~~ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARal~~~ 531 (1283)
||+|++.+| ..|++||+.++.. ....++..+ .+++.++.+ |++........+||||||||++|||||+.+
T Consensus 79 ~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~la~al~~~ 151 (220)
T cd03263 79 YCPQFDALFDELTVREHLRFYARLKGLPKSEIKE-----EVELLLRVL--GLTDKANKRARTLSGGMKRKLSLAIALIGG 151 (220)
T ss_pred EecCcCCccccCCHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CCHHHHhChhhhCCHHHHHHHHHHHHHhcC
Confidence 999999988 4699999987421 112221111 123344444 555445566678999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHH
Q 000789 532 PKILLLDEATSALDAESERIVQDALVKIMTSRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDEL 598 (1283)
Q Consensus 532 ~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l 598 (1283)
|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 152 p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 219 (220)
T cd03263 152 PSVLLLDEPTSGLDPASRRAIWDLILEVRKGRSIILTTHSMDEAEALCDRIAIMSDGKLRCIGSPQEL 219 (220)
T ss_pred CCEEEECCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecCCHHHc
Confidence 9999999999999999999999999998777999999999999875 999999999999999998875
No 283
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-41 Score=378.90 Aligned_cols=227 Identities=28% Similarity=0.457 Sum_probs=190.9
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCC-----CcceEEECCccCCCC--Ch
Q 000789 1039 AIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDP-----DSGHVLLDNIELPKF--KL 1111 (1283)
Q Consensus 1039 ~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~-----~~G~I~idG~di~~~--~~ 1111 (1283)
-|+++||+++|++ .++|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.+||.++... +.
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~ 79 (250)
T PRK14262 3 IIEIENFSAYYGE---KKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDV 79 (250)
T ss_pred eEEEEeeEEEeCC---ceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhH
Confidence 4899999999973 3599999999999999999999999999999999999984 899999999998653 34
Q ss_pred HHHhcceEEEccCCCCChhhHHHHHhcCCC--CCC----CHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHH
Q 000789 1112 SWLRQQMGLVSQEPVLFNETIRTNIAYGKQ--GGA----TEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQK 1185 (1283)
Q Consensus 1112 ~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~--~~~----sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQr 1185 (1283)
..+|+.++|+||+|.+|..|++||+.++.. ... .++++.++++..++.+.+. ........+||||||
T Consensus 80 ~~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~Gq~ 152 (250)
T PRK14262 80 TEYRKKVGMVFQKPTPFPMSIYDNVAFGPRIHGVKSKHKLDRIVEESLKKAALWDEVK-------SELNKPGTRLSGGQQ 152 (250)
T ss_pred HHhhhhEEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCchhH-------HHHhCChhhcCHHHH
Confidence 567889999999999999999999986421 111 2234566677766654332 223455668999999
Q ss_pred HHHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcCCceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHH
Q 000789 1186 QRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDAL 1264 (1283)
Q Consensus 1186 QRlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eL 1264 (1283)
||++||||++++|+||||||||++||+.+...+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 153 qr~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tili~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 232 (250)
T PRK14262 153 QRLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSENYTIVIVTHNIGQAIRIADYIAFMYRGELIEYGPTREI 232 (250)
T ss_pred HHHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHH
Confidence 9999999999999999999999999999999999999998778999999999998765 999999999999999999999
Q ss_pred HhccCchhHHH
Q 000789 1265 MKITDGAYASL 1275 (1283)
Q Consensus 1265 l~~~~g~y~~L 1275 (1283)
.+.+...|.+.
T Consensus 233 ~~~~~~~~~~~ 243 (250)
T PRK14262 233 VERPKNKLTEE 243 (250)
T ss_pred HhCCCChHHHH
Confidence 87544445443
No 284
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-41 Score=372.05 Aligned_cols=207 Identities=38% Similarity=0.613 Sum_probs=175.0
Q ss_pred EEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHHhcccE
Q 000789 375 IELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWIREKIG 454 (1283)
Q Consensus 375 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 454 (1283)
|+++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+. .+++++
T Consensus 1 l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~--~~~~i~ 75 (213)
T cd03259 1 LELKGLSKTYGS---VRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPDSGEILIDGRDVTGVPP--ERRNIG 75 (213)
T ss_pred CeeeeeEEEeCC---eeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcCcCch--hhccEE
Confidence 478999999963 369999999999999999999999999999999999999999999999999876543 467899
Q ss_pred EEccCCCCCc-ccHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHhcC
Q 000789 455 LVSQEPILFA-TSLRENIAYGKEN--ATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARAILKN 531 (1283)
Q Consensus 455 ~v~Q~~~l~~-~ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARal~~~ 531 (1283)
|++|++.+|. .|++||+.++... ...++..+ .+.+.++.+ |++........+||||||||++|||||+.+
T Consensus 76 ~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrl~la~al~~~ 148 (213)
T cd03259 76 MVFQDYALFPHLTVAENIAFGLKLRGVPKAEIRA-----RVRELLELV--GLEGLLNRYPHELSGGQQQRVALARALARE 148 (213)
T ss_pred EEcCchhhccCCcHHHHHHhHHHHcCCCHHHHHH-----HHHHHHHHc--CChhhhhcChhhCCHHHHHHHHHHHHHhcC
Confidence 9999998886 5999999875321 11211111 123444554 566556666789999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhc-cCEEEEEeCCEEeEec
Q 000789 532 PKILLLDEATSALDAESERIVQDALVKIMT--SRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKG 593 (1283)
Q Consensus 532 ~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g 593 (1283)
|++|||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 149 p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~g 213 (213)
T cd03259 149 PSLLLLDEPLSALDAKLREELREELKELQRELGITTIYVTHDQEEALALADRIAVMNEGRIVQVG 213 (213)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 999999999999999999999999998753 7899999999999865 9999999999998765
No 285
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=3.1e-41 Score=378.01 Aligned_cols=225 Identities=31% Similarity=0.464 Sum_probs=185.6
Q ss_pred EEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCC--------h
Q 000789 1040 IELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFK--------L 1111 (1283)
Q Consensus 1040 I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~--------~ 1111 (1283)
|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+ .
T Consensus 4 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (250)
T PRK11264 4 IEVKNLVKKFHG---QTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPEAGTIRVGDITIDTARSLSQQKGLI 80 (250)
T ss_pred EEEeceEEEECC---eeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccccccchhhHH
Confidence 899999999974 35999999999999999999999999999999999999999999999999986542 3
Q ss_pred HHHhcceEEEccCCCCCh-hhHHHHHhcCCC--CCCCHH----HHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhH
Q 000789 1112 SWLRQQMGLVSQEPVLFN-ETIRTNIAYGKQ--GGATEE----EIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQ 1184 (1283)
Q Consensus 1112 ~~lR~~i~~V~Qdp~Lf~-gTIreNl~~g~~--~~~sd~----ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQ 1184 (1283)
..+|++++||||++.+|. .|++||+.++.. .....+ .+.++++..+ ++........+|||||
T Consensus 81 ~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~g-----------l~~~~~~~~~~LS~Gq 149 (250)
T PRK11264 81 RQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVKGEPKEEATARARELLAKVG-----------LAGKETSYPRRLSGGQ 149 (250)
T ss_pred HHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcC-----------CcchhhCChhhCChHH
Confidence 467889999999998885 699999976411 112222 2333343333 3333344566899999
Q ss_pred HHHHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchHHhh-cCEEEEEeCCEEEEecChH
Q 000789 1185 KQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVM-VNRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHD 1262 (1283)
Q Consensus 1185 rQRlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~ 1262 (1283)
|||++||||++.+|++|||||||++||+.+.+.+.+.|+++. +++|+|+|||+++.+.. ||+|++|++|++++.|+++
T Consensus 150 ~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~ 229 (250)
T PRK11264 150 QQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFMDQGRIVEQGPAK 229 (250)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999999875 37899999999999976 9999999999999999999
Q ss_pred HHHhccCchh-HHHHHH
Q 000789 1263 ALMKITDGAY-ASLVAL 1278 (1283)
Q Consensus 1263 eLl~~~~g~y-~~L~~~ 1278 (1283)
++.+.+.-.| +.++..
T Consensus 230 ~~~~~~~~~~~~~~~~~ 246 (250)
T PRK11264 230 ALFADPQQPRTRQFLEK 246 (250)
T ss_pred HHhcCCCCHHHHHHHHh
Confidence 9976433233 444433
No 286
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=2.3e-41 Score=377.56 Aligned_cols=220 Identities=31% Similarity=0.525 Sum_probs=183.0
Q ss_pred EEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCH---HHHhc
Q 000789 375 IELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQL---KWIRE 451 (1283)
Q Consensus 375 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~---~~~r~ 451 (1283)
|+++||+++|+. +.++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. ..+++
T Consensus 2 l~~~~l~~~~~~--~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (243)
T TIGR02315 2 LEVENLSKVYPN--GKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPSSGSILLEGTDITKLRGKKLRKLRR 79 (243)
T ss_pred eEEEeeeeecCC--CcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCccEEEECCEEhhhCCHHHHHHHHh
Confidence 689999999962 2469999999999999999999999999999999999999999999999999877654 34678
Q ss_pred ccEEEccCCCCCc-ccHHHHHhcCCCCCC--HHHH---HHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHH
Q 000789 452 KIGLVSQEPILFA-TSLRENIAYGKENAT--DQEI---RTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIA 525 (1283)
Q Consensus 452 ~i~~v~Q~~~l~~-~ti~~ni~~~~~~~~--~~~~---~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiA 525 (1283)
+++|++|++.+|. .|++||+.++..... .... ........+.+.++.+ |++......+.+||||||||++||
T Consensus 80 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la 157 (243)
T TIGR02315 80 RIGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERV--GLADKAYQRADQLSGGQQQRVAIA 157 (243)
T ss_pred heEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHc--CcHhhhcCCcccCCHHHHHHHHHH
Confidence 8999999999887 599999987642110 0000 0000111233445555 666666777889999999999999
Q ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHH
Q 000789 526 RAILKNPKILLLDEATSALDAESERIVQDALVKIMT--SRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDEL 598 (1283)
Q Consensus 526 Ral~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l 598 (1283)
|||+.+|++|||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 158 ~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 233 (243)
T TIGR02315 158 RALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVDLAKKYADRIVGLKAGEIVFDGAPSEL 233 (243)
T ss_pred HHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecCCHHHh
Confidence 999999999999999999999999999999998753 6899999999999865 999999999999999998886
No 287
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-41 Score=382.71 Aligned_cols=216 Identities=32% Similarity=0.568 Sum_probs=186.2
Q ss_pred cEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHHhccc
Q 000789 374 EIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWIREKI 453 (1283)
Q Consensus 374 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 453 (1283)
.|+++||+++|++. .+++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||+++...+...+++.|
T Consensus 5 ~l~~~~l~~~~~~~-~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13635 5 IIRVEHISFRYPDA-ATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPEAGTITVGGMVLSEETVWDVRRQV 83 (279)
T ss_pred eEEEEEEEEEeCCC-CccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHhhhe
Confidence 48999999999642 24699999999999999999999999999999999999999999999999999888777788899
Q ss_pred EEEccCC--CCCcccHHHHHhcCCCC--CCHH----HHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHH
Q 000789 454 GLVSQEP--ILFATSLRENIAYGKEN--ATDQ----EIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIA 525 (1283)
Q Consensus 454 ~~v~Q~~--~l~~~ti~~ni~~~~~~--~~~~----~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiA 525 (1283)
+|++|++ .+++.||+|||.++... .+.+ ++.++++.. |++..+......||||||||++||
T Consensus 84 ~~~~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~-----------gL~~~~~~~~~~LS~G~~qrv~la 152 (279)
T PRK13635 84 GMVFQNPDNQFVGATVQDDVAFGLENIGVPREEMVERVDQALRQV-----------GMEDFLNREPHRLSGGQKQRVAIA 152 (279)
T ss_pred EEEEeCHHHhcccccHHHHHhhhHhhCCCCHHHHHHHHHHHHHHc-----------CChhhhhCCcccCCHHHHHHHHHH
Confidence 9999998 45677999999986321 1222 233344444 444444555569999999999999
Q ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhccCEEEEEeCCEEeEecChhHHhcC
Q 000789 526 RAILKNPKILLLDEATSALDAESERIVQDALVKIMT--SRTTVVVAHRLTTIRNADLIAVVHQGKIVEKGTHDELIKD 601 (1283)
Q Consensus 526 Ral~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~~~l~~~ 601 (1283)
|||+.+|++|||||||++||+.+...+.+.|+++.+ ++|+|++||+++.+..||+|++|++|++++.|+++++...
T Consensus 153 ral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 230 (279)
T PRK13635 153 GVLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLDEAAQADRVIVMNKGEILEEGTPEEIFKS 230 (279)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHcCCEEEEEECCEEEEECCHHHHhcC
Confidence 999999999999999999999999999999998864 6899999999999988999999999999999999988764
No 288
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.6e-41 Score=377.61 Aligned_cols=224 Identities=26% Similarity=0.466 Sum_probs=188.6
Q ss_pred ccEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCC--C---CcceEEECCccCCCC--C
Q 000789 1038 GAIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYD--P---DSGHVLLDNIELPKF--K 1110 (1283)
Q Consensus 1038 g~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~--~---~~G~I~idG~di~~~--~ 1110 (1283)
+.|+++|++++|++ .++|+|+||+|++||.+||+|+||||||||+++|.|+++ | ++|+|.+||.++... +
T Consensus 3 ~~l~~~nl~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~ 79 (252)
T PRK14256 3 NKVKLEQLNVHFGK---NHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGVD 79 (252)
T ss_pred cEEEEEEEEEEeCC---eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccCC
Confidence 56999999999973 359999999999999999999999999999999999986 4 689999999998653 3
Q ss_pred hHHHhcceEEEccCCCCCh-hhHHHHHhcCCC--CCCC----HHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChh
Q 000789 1111 LSWLRQQMGLVSQEPVLFN-ETIRTNIAYGKQ--GGAT----EEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGG 1183 (1283)
Q Consensus 1111 ~~~lR~~i~~V~Qdp~Lf~-gTIreNl~~g~~--~~~s----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgG 1183 (1283)
...+|++++|+||++.+|. .|++||+.++.. ...+ ++++.++++..++.+++.. .....+.+||||
T Consensus 80 ~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~G 152 (252)
T PRK14256 80 PVSIRRRVGMVFQKPNPFPAMSIYDNVIAGYKLNGRVNRSEADEIVESSLKRVALWDEVKD-------RLKSNAMELSGG 152 (252)
T ss_pred hHHhhccEEEEecCCCCCCcCcHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhH-------HhhCCcCcCCHH
Confidence 4567899999999999987 699999976411 1112 2345566666666544322 223455689999
Q ss_pred HHHHHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcCCceEEEEecCchHHhh-cCEEEEEeCCEEEEecChH
Q 000789 1184 QKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHD 1262 (1283)
Q Consensus 1184 QrQRlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~ 1262 (1283)
||||++||||++++|++|||||||++||+.+.+.+.+.|+++.+++|+|+|||+++.+.. ||++++|++|++++.|+++
T Consensus 153 ~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~ 232 (252)
T PRK14256 153 QQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKEKYTIIIVTHNMQQAARVSDYTAFFYMGDLVECGETK 232 (252)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCcEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999999998777899999999999865 9999999999999999999
Q ss_pred HHHhccCch
Q 000789 1263 ALMKITDGA 1271 (1283)
Q Consensus 1263 eLl~~~~g~ 1271 (1283)
++...+...
T Consensus 233 ~~~~~~~~~ 241 (252)
T PRK14256 233 KIFTTPEKK 241 (252)
T ss_pred HHHhCCCcH
Confidence 998654443
No 289
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=1.1e-41 Score=373.59 Aligned_cols=205 Identities=35% Similarity=0.476 Sum_probs=172.6
Q ss_pred EEEEEEEEECCCCC-CcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHH----H
Q 000789 1040 IELRCVSFKYPTRP-DVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSW----L 1114 (1283)
Q Consensus 1040 I~~~nVsf~Y~~~~-~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~----l 1114 (1283)
|+++||+++|++.. ..++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++.+.+... .
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 80 (218)
T cd03255 1 IELKNLSKTYGGGGEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPTSGEVRVDGTDISKLSEKELAAFR 80 (218)
T ss_pred CeEeeeEEEecCCCcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCCceeEEECCEehhhcchhHHHHHH
Confidence 57899999997421 146999999999999999999999999999999999999999999999999998776432 4
Q ss_pred hcceEEEccCCCCChh-hHHHHHhcCCC-CCCC----HHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHH
Q 000789 1115 RQQMGLVSQEPVLFNE-TIRTNIAYGKQ-GGAT----EEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRI 1188 (1283)
Q Consensus 1115 R~~i~~V~Qdp~Lf~g-TIreNl~~g~~-~~~s----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRl 1188 (1283)
|++++|+||++.+|.. |++||+.++.. .... ++++.++++..++.+. ......+||||||||+
T Consensus 81 ~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrv 149 (218)
T cd03255 81 RRHIGFVFQSFNLLPDLTALENVELPLLLAGVPKKERRERAEELLERVGLGDR-----------LNHYPSELSGGQQQRV 149 (218)
T ss_pred hhcEEEEeeccccCCCCcHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchh-----------hhcChhhcCHHHHHHH
Confidence 6789999999999876 99999987421 1122 2344555555555433 3334458999999999
Q ss_pred HHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchHHhhcCEEEEEeCCEE
Q 000789 1189 AIARAVLKNPKILLLDEATSALDAESERVVQDALERVMV--NRTTVVVAHRLTTIKNADIIAVVKNGVI 1255 (1283)
Q Consensus 1189 aiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~~D~I~vl~~G~I 1255 (1283)
+|||||+++|+||||||||++||+.+.+.+.+.|+++.+ ++|+|+|||+++.+..||++++|++|++
T Consensus 150 ~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~v~~l~~G~i 218 (218)
T cd03255 150 AIARALANDPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPELAEYADRIIELRDGKI 218 (218)
T ss_pred HHHHHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhcEEEEeeCCcC
Confidence 999999999999999999999999999999999998764 7899999999999888999999999974
No 290
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=2.6e-41 Score=374.31 Aligned_cols=217 Identities=25% Similarity=0.439 Sum_probs=181.4
Q ss_pred EEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHH-hcce
Q 000789 1040 IELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWL-RQQM 1118 (1283)
Q Consensus 1040 I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~l-R~~i 1118 (1283)
|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+...+ |+.+
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 77 (232)
T cd03218 1 LRAENLSKRYGK---RKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGKILLDGQDITKLPMHKRARLGI 77 (232)
T ss_pred CeEEEEEEEeCC---EEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccCCHhHHHhccE
Confidence 578999999974 359999999999999999999999999999999999999999999999999987776553 5689
Q ss_pred EEEccCCCCChh-hHHHHHhcCCC-CCCCHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHHHHHcc
Q 000789 1119 GLVSQEPVLFNE-TIRTNIAYGKQ-GGATEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLK 1196 (1283)
Q Consensus 1119 ~~V~Qdp~Lf~g-TIreNl~~g~~-~~~sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiARAll~ 1196 (1283)
+|+||++.+|.+ |++||+.++.. .....++..+ .+.+++..+ |++........+||||||||++||||++.
T Consensus 78 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~al~~ 150 (232)
T cd03218 78 GYLPQEASIFRKLTVEENILAVLEIRGLSKKEREE-----KLEELLEEF--HITHLRKSKASSLSGGERRRVEIARALAT 150 (232)
T ss_pred EEecCCccccccCcHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CChhhhhCChhhCCHHHHHHHHHHHHHhc
Confidence 999999999986 99999986421 1122222111 112333333 44444455566899999999999999999
Q ss_pred CCCEEEEecccCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHHHh
Q 000789 1197 NPKILLLDEATSALDAESERVVQDALERVM-VNRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDALMK 1266 (1283)
Q Consensus 1197 ~p~ILiLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl~ 1266 (1283)
+|++|||||||++||+++.+.+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 151 ~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 222 (232)
T cd03218 151 NPKFLLLDEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVRETLSITDRAYIIYEGKVLAEGTPEEIAA 222 (232)
T ss_pred CCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEEeCHHHhhc
Confidence 999999999999999999999999998875 47899999999987766 99999999999999999999865
No 291
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=3.4e-41 Score=375.78 Aligned_cols=213 Identities=25% Similarity=0.421 Sum_probs=182.8
Q ss_pred EEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHH-Hhcce
Q 000789 1040 IELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSW-LRQQM 1118 (1283)
Q Consensus 1040 I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~-lR~~i 1118 (1283)
|+++|++++|++ .++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.+||.++...+... .|+.+
T Consensus 3 i~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i 79 (242)
T TIGR03411 3 LYLEGLSVSFDG---FKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPDEGSVLFGGTDLTGLPEHQIARAGI 79 (242)
T ss_pred EEEEeeEEEcCC---eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCeecCCCCHHHHHhcCe
Confidence 789999999974 35999999999999999999999999999999999999999999999999998777654 35679
Q ss_pred EEEccCCCCChh-hHHHHHhcCCCCC---------C----CHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhH
Q 000789 1119 GLVSQEPVLFNE-TIRTNIAYGKQGG---------A----TEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQ 1184 (1283)
Q Consensus 1119 ~~V~Qdp~Lf~g-TIreNl~~g~~~~---------~----sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQ 1184 (1283)
+|+||++.+|.+ |++||+.++.... . .++++.++++..+ ++.........|||||
T Consensus 80 ~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----------l~~~~~~~~~~LS~Ge 148 (242)
T TIGR03411 80 GRKFQKPTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETIG-----------LADEADRLAGLLSHGQ 148 (242)
T ss_pred eEeccccccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHcC-----------CchhhcCChhhCCHHH
Confidence 999999999986 9999998742110 0 1123333444333 4333445556899999
Q ss_pred HHHHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcCCceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHH
Q 000789 1185 KQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDA 1263 (1283)
Q Consensus 1185 rQRlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~e 1263 (1283)
|||++||||++++|++|||||||++||+++...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|++++
T Consensus 149 ~qrv~laral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~~~~~~~~~~ 228 (242)
T TIGR03411 149 KQWLEIGMLLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAGKHSVVVVEHDMEFVRSIADKVTVLHQGSVLAEGSLDQ 228 (242)
T ss_pred HHHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeEEeeCCHHH
Confidence 99999999999999999999999999999999999999998778899999999999976 99999999999999999999
Q ss_pred HHh
Q 000789 1264 LMK 1266 (1283)
Q Consensus 1264 Ll~ 1266 (1283)
+..
T Consensus 229 ~~~ 231 (242)
T TIGR03411 229 VQA 231 (242)
T ss_pred Hhc
Confidence 875
No 292
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-41 Score=379.53 Aligned_cols=218 Identities=29% Similarity=0.467 Sum_probs=183.7
Q ss_pred cEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCC-----CCceEEECCcccC--CCCH
Q 000789 374 EIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDP-----DAGEVLIDGIDIK--KLQL 446 (1283)
Q Consensus 374 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~--~~~~ 446 (1283)
.|+++||+++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++| ++|+|.+||+++. +.+.
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 80 (253)
T PRK14267 4 AIETVNLRVYYGS---NHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDP 80 (253)
T ss_pred eEEEEeEEEEeCC---eeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccCh
Confidence 4899999999963 3599999999999999999999999999999999999987 4999999999986 4455
Q ss_pred HHHhcccEEEccCCCCCcc-cHHHHHhcCCC--C--CCHH----HHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChH
Q 000789 447 KWIREKIGLVSQEPILFAT-SLRENIAYGKE--N--ATDQ----EIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGG 517 (1283)
Q Consensus 447 ~~~r~~i~~v~Q~~~l~~~-ti~~ni~~~~~--~--~~~~----~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgG 517 (1283)
..+|++++|++|++.+|+. |+.||+.++.. . ...+ ++.++++..++.++ +.......+.+||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~~~~~~~~~LS~G 153 (253)
T PRK14267 81 IEVRREVGMVFQYPNPFPHLTIYDNVAIGVKLNGLVKSKKELDERVEWALKKAALWDE-------VKDRLNDYPSNLSGG 153 (253)
T ss_pred HHHhhceeEEecCCccCCCCcHHHHHHHHHHhcCccCCHHHHHHHHHHHHHHcCCccc-------hhhhhccChhhCCHH
Confidence 5678899999999999976 99999987531 1 0122 22333333322211 123356677899999
Q ss_pred HHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChh
Q 000789 518 QKQRIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMTSRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHD 596 (1283)
Q Consensus 518 qkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~ 596 (1283)
||||++|||||+++|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++
T Consensus 154 ~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~ 233 (253)
T PRK14267 154 QRQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKKEYTIVLVTHSPAQAARVSDYVAFLYLGKLIEVGPTR 233 (253)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999999998777899999999999875 9999999999999999999
Q ss_pred HHhcC
Q 000789 597 ELIKD 601 (1283)
Q Consensus 597 ~l~~~ 601 (1283)
++...
T Consensus 234 ~~~~~ 238 (253)
T PRK14267 234 KVFEN 238 (253)
T ss_pred HHHhC
Confidence 98765
No 293
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=3.4e-41 Score=378.72 Aligned_cols=219 Identities=27% Similarity=0.434 Sum_probs=185.4
Q ss_pred ccEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCC--------
Q 000789 1038 GAIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKF-------- 1109 (1283)
Q Consensus 1038 g~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~-------- 1109 (1283)
+.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...
T Consensus 4 ~~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (257)
T PRK10619 4 NKLNVIDLHKRYGE---HEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQLK 80 (257)
T ss_pred ccEEEeeeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccccccccccc
Confidence 46999999999974 3599999999999999999999999999999999999999999999999988642
Q ss_pred -----ChHHHhcceEEEccCCCCCh-hhHHHHHhcCCC--CCCC----HHHHHHHHHHhChHHHHHhCCCCcccccCCCC
Q 000789 1110 -----KLSWLRQQMGLVSQEPVLFN-ETIRTNIAYGKQ--GGAT----EEEIIAATEASNAHNFISALPHGYETNVGERG 1177 (1283)
Q Consensus 1110 -----~~~~lR~~i~~V~Qdp~Lf~-gTIreNl~~g~~--~~~s----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G 1177 (1283)
....+|++++||||++.+|. .|++||+.++.. .... ++++.++++..++.+.. .....
T Consensus 81 ~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~----------~~~~~ 150 (257)
T PRK10619 81 VADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKQEARERAVKYLAKVGIDERA----------QGKYP 150 (257)
T ss_pred cccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCChhh----------hhCCc
Confidence 13467889999999999997 599999976311 1112 23445555555554332 13445
Q ss_pred CCCChhHHHHHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchHHhh-cCEEEEEeCCEE
Q 000789 1178 VQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVM-VNRTTVVVAHRLTTIKN-ADIIAVVKNGVI 1255 (1283)
Q Consensus 1178 ~~LSgGQrQRlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHrl~ti~~-~D~I~vl~~G~I 1255 (1283)
..||||||||++|||||+++|++|||||||++||+.+.+.+.+.|+++. .++|+|+|||+++.+.. ||||++|++|++
T Consensus 151 ~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i 230 (257)
T PRK10619 151 VHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLHQGKI 230 (257)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEE
Confidence 6899999999999999999999999999999999999999999999875 47999999999999986 999999999999
Q ss_pred EEecChHHHHhccC
Q 000789 1256 AEQGSHDALMKITD 1269 (1283)
Q Consensus 1256 ve~Gt~~eLl~~~~ 1269 (1283)
++.|+++++.+.+.
T Consensus 231 ~~~~~~~~~~~~~~ 244 (257)
T PRK10619 231 EEEGAPEQLFGNPQ 244 (257)
T ss_pred EEeCCHHHhhhCcc
Confidence 99999999986533
No 294
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-41 Score=377.54 Aligned_cols=219 Identities=34% Similarity=0.530 Sum_probs=184.7
Q ss_pred cEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCC-----CCceEEECCcccCCCCHHH
Q 000789 374 EIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDP-----DAGEVLIDGIDIKKLQLKW 448 (1283)
Q Consensus 374 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~~~~~~~ 448 (1283)
.|+++||+++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.++...+...
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 79 (250)
T PRK14247 3 KIEIRDLKVSFGQ---VEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIE 79 (250)
T ss_pred eEEEEeeEEEECC---eeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHH
Confidence 4899999999964 3599999999999999999999999999999999999974 6999999999998888778
Q ss_pred HhcccEEEccCCCCC-cccHHHHHhcCCCC----CCH----HHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHH
Q 000789 449 IREKIGLVSQEPILF-ATSLRENIAYGKEN----ATD----QEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQK 519 (1283)
Q Consensus 449 ~r~~i~~v~Q~~~l~-~~ti~~ni~~~~~~----~~~----~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqk 519 (1283)
+|+.|+|++|++.+| ..|++||+.++... ... +++.++++..++.+. ++........+||||||
T Consensus 80 ~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~~~~~~~~~LSgG~~ 152 (250)
T PRK14247 80 LRRRVQMVFQIPNPIPNLSIFENVALGLKLNRLVKSKKELQERVRWALEKAQLWDE-------VKDRLDAPAGKLSGGQQ 152 (250)
T ss_pred HhccEEEEeccCccCCCCcHHHHHHHHHHhccccCCHHHHHHHHHHHHHHcCCCcc-------hhhhhcCCcccCCHHHH
Confidence 889999999999765 56999999875321 111 122333333332211 12234566789999999
Q ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHH
Q 000789 520 QRIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMTSRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDEL 598 (1283)
Q Consensus 520 qriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l 598 (1283)
||++|||||+++|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 153 qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 232 (250)
T PRK14247 153 QRLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKKDMTIVLVTHFPQQAARISDYVAFLYKGQIVEWGPTREV 232 (250)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCeEEEECCHHHH
Confidence 9999999999999999999999999999999999999998778999999999999865 999999999999999999998
Q ss_pred hcCC
Q 000789 599 IKDP 602 (1283)
Q Consensus 599 ~~~~ 602 (1283)
.+.+
T Consensus 233 ~~~~ 236 (250)
T PRK14247 233 FTNP 236 (250)
T ss_pred HcCC
Confidence 7653
No 295
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.6e-41 Score=376.46 Aligned_cols=219 Identities=31% Similarity=0.523 Sum_probs=187.6
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCC-----cceEEECCccCCC--CCh
Q 000789 1039 AIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPD-----SGHVLLDNIELPK--FKL 1111 (1283)
Q Consensus 1039 ~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~-----~G~I~idG~di~~--~~~ 1111 (1283)
.|+++||+|+|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|+ +|+|.+||.++.+ .+.
T Consensus 4 ~l~~~~l~~~~~~---~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~ 80 (251)
T PRK14249 4 KIKIRGVNFFYHK---HQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLDV 80 (251)
T ss_pred eEEEEEEEEEECC---eeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccccCh
Confidence 5899999999974 35999999999999999999999999999999999999997 6999999999864 345
Q ss_pred HHHhcceEEEccCCCCChhhHHHHHhcCCC-CCCC-----HHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHH
Q 000789 1112 SWLRQQMGLVSQEPVLFNETIRTNIAYGKQ-GGAT-----EEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQK 1185 (1283)
Q Consensus 1112 ~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~-~~~s-----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQr 1185 (1283)
..+|+.++||||+|.+|+.|++||+.++.. .... ++.+.++++..++++.+. ......+.+||||||
T Consensus 81 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LS~Gq~ 153 (251)
T PRK14249 81 VNLRKRVGMVFQQPNPFPKSIFDNVAFGPRMLGTTAQSRLDEVVEKSLRQAALWDEVK-------DNLHKSGLALSGGQQ 153 (251)
T ss_pred HHhhceEEEEecCCccCcCcHHHHHhhHHHhcCCChhhHHHHHHHHHHHHhCCchhhh-------hHhhCCcccCCHHHH
Confidence 678899999999999999999999987521 1111 233445556566554432 234456678999999
Q ss_pred HHHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcCCceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHH
Q 000789 1186 QRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDAL 1264 (1283)
Q Consensus 1186 QRlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eL 1264 (1283)
||++||||++.+|++|||||||++||+.+...+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 154 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tilivsh~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 233 (251)
T PRK14249 154 QRLCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELKQNYTIAIVTHNMQQAARASDWTGFLLTGDLVEYGRTGEI 233 (251)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhCCEEEEEeCCeEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988667999999999999877 899999999999999999999
Q ss_pred Hhc
Q 000789 1265 MKI 1267 (1283)
Q Consensus 1265 l~~ 1267 (1283)
...
T Consensus 234 ~~~ 236 (251)
T PRK14249 234 FSR 236 (251)
T ss_pred HhC
Confidence 764
No 296
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=2.2e-41 Score=374.89 Aligned_cols=216 Identities=28% Similarity=0.496 Sum_probs=186.2
Q ss_pred EEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHH-Hhccc
Q 000789 375 IELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKW-IREKI 453 (1283)
Q Consensus 375 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~-~r~~i 453 (1283)
|+++||+++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... .++.+
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 77 (232)
T cd03218 1 LRAENLSKRYGK---RKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGKILLDGQDITKLPMHKRARLGI 77 (232)
T ss_pred CeEEEEEEEeCC---EEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccCCHhHHHhccE
Confidence 478999999963 35999999999999999999999999999999999999999999999999988776554 35679
Q ss_pred EEEccCCCCCcc-cHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHhc
Q 000789 454 GLVSQEPILFAT-SLRENIAYGKEN--ATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARAILK 530 (1283)
Q Consensus 454 ~~v~Q~~~l~~~-ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARal~~ 530 (1283)
+|++|++.+|+. |++||+.++.+. ...++.. ..+++.++.+ |++........+||||||||++|||||+.
T Consensus 78 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~al~~ 150 (232)
T cd03218 78 GYLPQEASIFRKLTVEENILAVLEIRGLSKKERE-----EKLEELLEEF--HITHLRKSKASSLSGGERRRVEIARALAT 150 (232)
T ss_pred EEecCCccccccCcHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHc--CChhhhhCChhhCCHHHHHHHHHHHHHhc
Confidence 999999999986 999999875321 1121111 1234556666 77777788888999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC-CCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHHhc
Q 000789 531 NPKILLLDEATSALDAESERIVQDALVKIMT-SRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDELIK 600 (1283)
Q Consensus 531 ~~~illlDE~ts~lD~~~~~~i~~~l~~~~~-~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~ 600 (1283)
+|++|||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 151 ~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 222 (232)
T cd03218 151 NPKFLLLDEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVRETLSITDRAYIIYEGKVLAEGTPEEIAA 222 (232)
T ss_pred CCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEEeCHHHhhc
Confidence 9999999999999999999999999998754 6899999999988765 99999999999999999988764
No 297
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.6e-41 Score=380.66 Aligned_cols=217 Identities=28% Similarity=0.485 Sum_probs=187.4
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHhcce
Q 000789 1039 AIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQM 1118 (1283)
Q Consensus 1039 ~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i 1118 (1283)
.|+++|++++|++. ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||.++.+.+...+|+++
T Consensus 7 ~l~i~~l~~~~~~~-~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i 85 (269)
T PRK13648 7 IIVFKNVSFQYQSD-ASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKLRKHI 85 (269)
T ss_pred eEEEEEEEEEcCCC-CCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhhe
Confidence 49999999999753 24599999999999999999999999999999999999999999999999999888888899999
Q ss_pred EEEccCCC--CChhhHHHHHhcCCC-CCCC----HHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHH
Q 000789 1119 GLVSQEPV--LFNETIRTNIAYGKQ-GGAT----EEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIA 1191 (1283)
Q Consensus 1119 ~~V~Qdp~--Lf~gTIreNl~~g~~-~~~s----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiA 1191 (1283)
+||||+|. ++..|+++|+.++.. ...+ ++++.++++..++.++.. ....+||||||||++||
T Consensus 86 ~~v~q~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrl~la 154 (269)
T PRK13648 86 GIVFQNPDNQFVGSIVKYDVAFGLENHAVPYDEMHRRVSEALKQVDMLERAD-----------YEPNALSGGQKQRVAIA 154 (269)
T ss_pred eEEEeChHHhcccccHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCchhhh-----------CCcccCCHHHHHHHHHH
Confidence 99999984 556789999977521 1122 234556666666554432 23458999999999999
Q ss_pred HHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchHHhhcCEEEEEeCCEEEEecChHHHHhc
Q 000789 1192 RAVLKNPKILLLDEATSALDAESERVVQDALERVMV--NRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALMKI 1267 (1283)
Q Consensus 1192 RAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~~D~I~vl~~G~Ive~Gt~~eLl~~ 1267 (1283)
||++.+|++|||||||++||+.+.+.+.+.|+++.+ ++|+|+|||+++.+..||+|++|++|++++.|+++++...
T Consensus 155 ral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 232 (269)
T PRK13648 155 GVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLSEAMEADHVIVMNKGTVYKEGTPTEIFDH 232 (269)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCchHHhcCCEEEEEECCEEEEecCHHHHhcC
Confidence 999999999999999999999999999999998753 6899999999999988999999999999999999998764
No 298
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.9e-41 Score=380.53 Aligned_cols=215 Identities=29% Similarity=0.501 Sum_probs=185.5
Q ss_pred EEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCC-hHHHhcce
Q 000789 1040 IELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFK-LSWLRQQM 1118 (1283)
Q Consensus 1040 I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~-~~~lR~~i 1118 (1283)
|+++||+++|++. .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+ ...+++.+
T Consensus 2 l~~~~l~~~~~~~--~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 79 (274)
T PRK13644 2 IRLENVSYSYPDG--TPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQKGKVLVSGIDTGDFSKLQGIRKLV 79 (274)
T ss_pred EEEEEEEEEcCCC--CceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEECCccccHHHHHhhe
Confidence 7899999999632 35999999999999999999999999999999999999999999999999998765 46778899
Q ss_pred EEEccCCC--CChhhHHHHHhcCCCC-CCC----HHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHH
Q 000789 1119 GLVSQEPV--LFNETIRTNIAYGKQG-GAT----EEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIA 1191 (1283)
Q Consensus 1119 ~~V~Qdp~--Lf~gTIreNl~~g~~~-~~s----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiA 1191 (1283)
+||||+|. +++.|++||+.++... ..+ ++++.++++..++.++... ....||||||||++||
T Consensus 80 ~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~-----------~~~~LS~G~~qrv~la 148 (274)
T PRK13644 80 GIVFQNPETQFVGRTVEEDLAFGPENLCLPPIEIRKRVDRALAEIGLEKYRHR-----------SPKTLSGGQGQCVALA 148 (274)
T ss_pred EEEEEChhhhcccchHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHhcC-----------CcccCCHHHHHHHHHH
Confidence 99999985 6778999999875211 122 2345556666666554433 3458999999999999
Q ss_pred HHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchHHhhcCEEEEEeCCEEEEecChHHHHhc
Q 000789 1192 RAVLKNPKILLLDEATSALDAESERVVQDALERVM-VNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALMKI 1267 (1283)
Q Consensus 1192 RAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHrl~ti~~~D~I~vl~~G~Ive~Gt~~eLl~~ 1267 (1283)
|||+.+|+||||||||++||+.+...+.+.|+++. +++|+|++||+++.+..||+|++|++|++++.|+++++...
T Consensus 149 ral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 225 (274)
T PRK13644 149 GILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLEELHDADRIIVMDRGKIVLEGEPENVLSD 225 (274)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHhhCCEEEEEECCEEEEECCHHHHhcC
Confidence 99999999999999999999999999999998865 47899999999999988999999999999999999998753
No 299
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.7e-41 Score=392.47 Aligned_cols=223 Identities=32% Similarity=0.541 Sum_probs=188.9
Q ss_pred cccEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHHhc
Q 000789 372 EGEIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWIRE 451 (1283)
Q Consensus 372 ~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~ 451 (1283)
...|+++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.+||+++.+.++ .++
T Consensus 17 ~~~l~l~~v~~~~~~---~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r 91 (377)
T PRK11607 17 TPLLEIRNLTKSFDG---QHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPTAGQIMLDGVDLSHVPP--YQR 91 (377)
T ss_pred CceEEEEeEEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCH--HHC
Confidence 345999999999963 358999999999999999999999999999999999999999999999999987664 467
Q ss_pred ccEEEccCCCCCcc-cHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHH
Q 000789 452 KIGLVSQEPILFAT-SLRENIAYGKEN--ATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARAI 528 (1283)
Q Consensus 452 ~i~~v~Q~~~l~~~-ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARal 528 (1283)
.||||+|++.+|+. ||+|||.|+... .+..+..+ .+.+.++.+ |++........+|||||||||+|||||
T Consensus 92 ~ig~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~-----~v~~~l~~l--~L~~~~~~~~~~LSgGq~QRVaLARAL 164 (377)
T PRK11607 92 PINMMFQSYALFPHMTVEQNIAFGLKQDKLPKAEIAS-----RVNEMLGLV--HMQEFAKRKPHQLSGGQRQRVALARSL 164 (377)
T ss_pred CEEEEeCCCccCCCCCHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHHHH
Confidence 89999999999976 999999987431 22222221 122334444 555556666789999999999999999
Q ss_pred hcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHHhcCCCCh
Q 000789 529 LKNPKILLLDEATSALDAESERIVQDALVKIMT--SRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDELIKDPEGP 605 (1283)
Q Consensus 529 ~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~~~~~ 605 (1283)
+.+|++||||||||+||+.+...+.+.|+++.+ +.|+|+|||+++.+.. ||+|++|++|++++.|+++|+..++...
T Consensus 165 ~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~~~~~p~~~ 244 (377)
T PRK11607 165 AKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEIYEHPTTR 244 (377)
T ss_pred hcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEeCCEEEEEcCHHHHHhCCccH
Confidence 999999999999999999999999988887643 6899999999999765 9999999999999999999999875544
Q ss_pred h
Q 000789 606 Y 606 (1283)
Q Consensus 606 ~ 606 (1283)
|
T Consensus 245 ~ 245 (377)
T PRK11607 245 Y 245 (377)
T ss_pred H
Confidence 4
No 300
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.3e-41 Score=381.15 Aligned_cols=217 Identities=30% Similarity=0.520 Sum_probs=186.4
Q ss_pred cEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHHhccc
Q 000789 374 EIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWIREKI 453 (1283)
Q Consensus 374 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 453 (1283)
-|+++||+++|++....++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|+++...+...+++.+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~i 83 (277)
T PRK13642 4 ILEVENLVFKYEKESDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEFEGKVKIDGELLTAENVWNLRRKI 83 (277)
T ss_pred eEEEEEEEEEcCCCCcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCCEEEECCEECCcCCHHHHhcce
Confidence 48999999999743334599999999999999999999999999999999999999999999999999877777788899
Q ss_pred EEEccCCC--CCcccHHHHHhcCCC--CCCHHH----HHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHH
Q 000789 454 GLVSQEPI--LFATSLRENIAYGKE--NATDQE----IRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIA 525 (1283)
Q Consensus 454 ~~v~Q~~~--l~~~ti~~ni~~~~~--~~~~~~----~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiA 525 (1283)
+|++|++. ++..|+.|||.++.. ..+.++ +.++++.++ ++.........||||||||++||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~-----------l~~~~~~~~~~LS~G~~qrv~lA 152 (277)
T PRK13642 84 GMVFQNPDNQFVGATVEDDVAFGMENQGIPREEMIKRVDEALLAVN-----------MLDFKTREPARLSGGQKQRVAVA 152 (277)
T ss_pred EEEEECHHHhhccCCHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCC-----------CHhHhhCCcccCCHHHHHHHHHH
Confidence 99999983 667899999987532 123333 233344433 33334445679999999999999
Q ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhccCEEEEEeCCEEeEecChhHHhcC
Q 000789 526 RAILKNPKILLLDEATSALDAESERIVQDALVKIMT--SRTTVVVAHRLTTIRNADLIAVVHQGKIVEKGTHDELIKD 601 (1283)
Q Consensus 526 Ral~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~~~l~~~ 601 (1283)
|||+.+|++|||||||++||+.+.+.+.+.|.++.+ ++|+|++||+++.+..||+|++|++|++++.|++++++..
T Consensus 153 raL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 230 (277)
T PRK13642 153 GIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDEAASSDRILVMKAGEIIKEAAPSELFAT 230 (277)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 999999999999999999999999999999998864 7899999999999988999999999999999999998764
No 301
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=4e-41 Score=373.36 Aligned_cols=216 Identities=31% Similarity=0.525 Sum_probs=186.4
Q ss_pred EEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHHhcccE
Q 000789 375 IELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWIREKIG 454 (1283)
Q Consensus 375 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 454 (1283)
|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||.++...+... ++.++
T Consensus 2 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~i~~~~~~~-~~~i~ 77 (236)
T TIGR03864 2 LEVAGLSFAYGA---RRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQEGQISVAGHDLRRAPRAA-LARLG 77 (236)
T ss_pred EEEEeeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccCChhh-hhhEE
Confidence 689999999963 36999999999999999999999999999999999999999999999999987766544 45899
Q ss_pred EEccCCCCC-cccHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHhcC
Q 000789 455 LVSQEPILF-ATSLRENIAYGKEN--ATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARAILKN 531 (1283)
Q Consensus 455 ~v~Q~~~l~-~~ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARal~~~ 531 (1283)
|++|++.++ ..|++||+.++... ....+.. ..+.++++.+ |++......+.+||||||||++|||||+++
T Consensus 78 ~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrl~laral~~~ 150 (236)
T TIGR03864 78 VVFQQPTLDLDLSVRQNLRYHAALHGLSRAEAR-----ERIAALLARL--GLAERADDKVRELNGGHRRRVEIARALLHR 150 (236)
T ss_pred EeCCCCCCcccCcHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHc--CChhhhcCChhhCCHHHHHHHHHHHHHhcC
Confidence 999999875 56999999875321 1222211 1234556666 777777888889999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHc--CCCeEEEEecCchhhhccCEEEEEeCCEEeEecChhHHhcC
Q 000789 532 PKILLLDEATSALDAESERIVQDALVKIM--TSRTTVVVAHRLTTIRNADLIAVVHQGKIVEKGTHDELIKD 601 (1283)
Q Consensus 532 ~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~~~l~~~ 601 (1283)
|+++||||||++||+.+.+.+.+.|+++. +++|+|++||+++.+..||+|++|++|++++.|+++++.+.
T Consensus 151 p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 222 (236)
T TIGR03864 151 PALLLLDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVDEIEADDRLVVLHRGRVLADGAAAELRGA 222 (236)
T ss_pred CCEEEEcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChhhHhhCCEEEEEeCCeEEEeCCHHHHHHH
Confidence 99999999999999999999999999885 37899999999999988999999999999999999988764
No 302
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.2e-41 Score=378.46 Aligned_cols=221 Identities=29% Similarity=0.487 Sum_probs=190.2
Q ss_pred EEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHhcceE
Q 000789 1040 IELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMG 1119 (1283)
Q Consensus 1040 I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~ 1119 (1283)
|+++|++++|++ .++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.+||.++.+.+...+++.++
T Consensus 3 l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (255)
T PRK11231 3 LRTENLTVGYGT---KRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQSGTVFLGDKPISMLSSRQLARRLA 79 (255)
T ss_pred EEEEeEEEEECC---EEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCcEEEECCEEhHHCCHHHHhhheE
Confidence 789999999973 36999999999999999999999999999999999999999999999999998888888888999
Q ss_pred EEccCCCCChh-hHHHHHhcCCC------C---CCCHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHH
Q 000789 1120 LVSQEPVLFNE-TIRTNIAYGKQ------G---GATEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIA 1189 (1283)
Q Consensus 1120 ~V~Qdp~Lf~g-TIreNl~~g~~------~---~~sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRla 1189 (1283)
|+||++.+|.+ |+.||+.++.. . ...++++.++++..++.++... ....||||||||++
T Consensus 80 ~~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv~ 148 (255)
T PRK11231 80 LLPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQTRINHLADR-----------RLTDLSGGQRQRAF 148 (255)
T ss_pred EecccCCCCCCccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHcCCHHHHcC-----------CcccCCHHHHHHHH
Confidence 99999998866 99999987521 0 1123356667777776554433 34589999999999
Q ss_pred HHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHHHhc
Q 000789 1190 IARAVLKNPKILLLDEATSALDAESERVVQDALERVM-VNRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDALMKI 1267 (1283)
Q Consensus 1190 iARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl~~ 1267 (1283)
||||++++|++|||||||++||+++.+.+.+.|+++. +++|+|++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 149 laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 228 (255)
T PRK11231 149 LAMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLNQASRYCDHLVVLANGHVMAQGTPEEVMTP 228 (255)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHhcCEEEEEECCeEEEEcCHHHhcCH
Confidence 9999999999999999999999999999999998875 47899999999999865 999999999999999999998753
Q ss_pred cCchhHHHH
Q 000789 1268 TDGAYASLV 1276 (1283)
Q Consensus 1268 ~~g~y~~L~ 1276 (1283)
..+.+.+
T Consensus 229 --~~~~~~~ 235 (255)
T PRK11231 229 --GLLRTVF 235 (255)
T ss_pred --HHHHHHh
Confidence 3344444
No 303
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-41 Score=395.64 Aligned_cols=210 Identities=39% Similarity=0.598 Sum_probs=176.9
Q ss_pred ccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHH----hcccEEEccCCCCCcc-c
Q 000789 392 IFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWI----REKIGLVSQEPILFAT-S 466 (1283)
Q Consensus 392 ~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~----r~~i~~v~Q~~~l~~~-t 466 (1283)
+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||+++...+...+ +++++||+|++.+|+. |
T Consensus 43 ~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l~~~~T 122 (400)
T PRK10070 43 GVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPHMT 122 (400)
T ss_pred EEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcCCCCCC
Confidence 7999999999999999999999999999999999999999999999999988776543 4689999999999975 9
Q ss_pred HHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCC
Q 000789 467 LRENIAYGKEN--ATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARAILKNPKILLLDEATSAL 544 (1283)
Q Consensus 467 i~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARal~~~~~illlDE~ts~l 544 (1283)
++||+.++... ...++..+ .+.+.++.+ |++........+||||||||++|||||+.+|++|||||||++|
T Consensus 123 v~enl~~~~~~~~~~~~~~~~-----~~~e~L~~~--gL~~~~~~~~~~LSgGq~QRv~LArAL~~~P~iLLLDEPts~L 195 (400)
T PRK10070 123 VLDNTAFGMELAGINAEERRE-----KALDALRQV--GLENYAHSYPDELSGGMRQRVGLARALAINPDILLMDEAFSAL 195 (400)
T ss_pred HHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CCChhhhcCcccCCHHHHHHHHHHHHHhcCCCEEEEECCCccC
Confidence 99999986321 12211111 122344444 5555556666799999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHc--CCCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHHhcCCCChhHH
Q 000789 545 DAESERIVQDALVKIM--TSRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDELIKDPEGPYTQ 608 (1283)
Q Consensus 545 D~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~~~~~~~~ 608 (1283)
|+.+.+.+++.|.++. .++|+|+|||+++.+.. ||+|++|++|+|++.|++++++.++...|.+
T Consensus 196 D~~~r~~l~~~L~~l~~~~g~TIIivTHd~~~~~~~~Dri~vL~~G~i~~~g~~~~l~~~~~~~~v~ 262 (400)
T PRK10070 196 DPLIRTEMQDELVKLQAKHQRTIVFISHDLDEAMRIGDRIAIMQNGEVVQVGTPDEILNNPANDYVR 262 (400)
T ss_pred CHHHHHHHHHHHHHHHHHCCCeEEEEECCHHHHHHhCCEEEEEECCEEEecCCHHHHHhCcccHHHH
Confidence 9999999999999875 37899999999999865 9999999999999999999998765444543
No 304
>cd03291 ABCC_CFTR1 The CFTR subfamily domain 1. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits, or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=1.9e-40 Score=373.52 Aligned_cols=218 Identities=26% Similarity=0.472 Sum_probs=193.3
Q ss_pred CccccEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHH
Q 000789 370 KIEGEIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWI 449 (1283)
Q Consensus 370 ~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~ 449 (1283)
...+.|+++|+++.. .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 35 ~~~~~l~i~nls~~~-----~~vL~~vs~~i~~Ge~~~liG~NGsGKSTLl~~I~Gl~~p~~G~I~i~g----------- 98 (282)
T cd03291 35 SDDNNLFFSNLCLVG-----APVLKNINLKIEKGEMLAITGSTGSGKTSLLMLILGELEPSEGKIKHSG----------- 98 (282)
T ss_pred CCCCeEEEEEEEEec-----ccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECC-----------
Confidence 345679999999952 3599999999999999999999999999999999999999999999998
Q ss_pred hcccEEEccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHh
Q 000789 450 REKIGLVSQEPILFATSLRENIAYGKENATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARAIL 529 (1283)
Q Consensus 450 r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARal~ 529 (1283)
.|+|++|++.+|+.|++||+.++.. ....++.++++..++.+.+..+|.++++.+++.+..||||||||++|||||+
T Consensus 99 --~i~yv~q~~~l~~~tv~enl~~~~~-~~~~~~~~~l~~~~l~~~l~~~~~~~~~~~~~~~~~LSgGq~qrv~lAraL~ 175 (282)
T cd03291 99 --RISFSSQFSWIMPGTIKENIIFGVS-YDEYRYKSVVKACQLEEDITKFPEKDNTVLGEGGITLSGGQRARISLARAVY 175 (282)
T ss_pred --EEEEEeCcccccccCHHHHhhcccc-cCHHHHHHHHHHhCCHHHHHhccccccceecCCCCcCCHHHHHHHHHHHHHh
Confidence 4999999999999999999998643 2334556667777888899999999999999999999999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHH-HHHcCCCeEEEEecCchhhhccCEEEEEeCCEEeEecChhHHhcCCCChhH
Q 000789 530 KNPKILLLDEATSALDAESERIVQDAL-VKIMTSRTTVVVAHRLTTIRNADLIAVVHQGKIVEKGTHDELIKDPEGPYT 607 (1283)
Q Consensus 530 ~~~~illlDE~ts~lD~~~~~~i~~~l-~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~~~l~~~~~~~~~ 607 (1283)
.+|++|||||||++||+.+...+.+.+ +.+.+++|+|++||+++.+..||++++|++|++++.|+++++... ...|.
T Consensus 176 ~~p~iLiLDEPt~gLD~~~~~~l~~~ll~~~~~~~tIiiisH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~-~~~~~ 253 (282)
T cd03291 176 KDADLYLLDSPFGYLDVFTEKEIFESCVCKLMANKTRILVTSKMEHLKKADKILILHEGSSYFYGTFSELQSL-RPDFS 253 (282)
T ss_pred cCCCEEEEECCCccCCHHHHHHHHHHHHHHhhCCCEEEEEeCChHHHHhCCEEEEEECCEEEEECCHHHHHhc-chHHH
Confidence 999999999999999999999888754 556567899999999999988999999999999999999998764 33444
No 305
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=2.9e-41 Score=371.14 Aligned_cols=206 Identities=32% Similarity=0.492 Sum_probs=173.0
Q ss_pred EEEEEEEEECCCCC-CcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHH---Hh
Q 000789 1040 IELRCVSFKYPTRP-DVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSW---LR 1115 (1283)
Q Consensus 1040 I~~~nVsf~Y~~~~-~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~---lR 1115 (1283)
|+++||+++|++.. ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||.++.+++... +|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (221)
T TIGR02211 2 LKCENLGKRYQEGKLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPTSGEVLFNGQSLSKLSSNERAKLR 81 (221)
T ss_pred EEEEeeeEEccCCCcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcCHhHHHHHH
Confidence 78999999997421 146999999999999999999999999999999999999999999999999998877544 34
Q ss_pred -cceEEEccCCCCCh-hhHHHHHhcCCC-CCCC----HHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHH
Q 000789 1116 -QQMGLVSQEPVLFN-ETIRTNIAYGKQ-GGAT----EEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRI 1188 (1283)
Q Consensus 1116 -~~i~~V~Qdp~Lf~-gTIreNl~~g~~-~~~s----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRl 1188 (1283)
+.++||||++.+|. .|++||+.++.. ...+ ++++.++++..++.+. .......||||||||+
T Consensus 82 ~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrv 150 (221)
T TIGR02211 82 NKKLGFIYQFHHLLPDFTALENVAMPLLIGKKSVKEAKERAYEMLEKVGLEHR-----------INHRPSELSGGERQRV 150 (221)
T ss_pred HhcEEEEecccccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhh-----------hhCChhhCCHHHHHHH
Confidence 68999999999885 699999976311 1122 2234455555544433 3334458999999999
Q ss_pred HHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchHHhhcCEEEEEeCCEEE
Q 000789 1189 AIARAVLKNPKILLLDEATSALDAESERVVQDALERVMV--NRTTVVVAHRLTTIKNADIIAVVKNGVIA 1256 (1283)
Q Consensus 1189 aiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~~D~I~vl~~G~Iv 1256 (1283)
+||||++++|+||||||||++||+++...+.+.|+++.+ ++|+|+|||+++.+..||+|++|++|+++
T Consensus 151 ~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~d~v~~l~~G~i~ 220 (221)
T TIGR02211 151 AIARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLELAKKLDRVLEMKDGQLF 220 (221)
T ss_pred HHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhhcCEEEEEeCCEec
Confidence 999999999999999999999999999999999998753 78999999999999889999999999985
No 306
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=3.7e-41 Score=374.85 Aligned_cols=214 Identities=33% Similarity=0.500 Sum_probs=182.3
Q ss_pred EEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCC--ChHHHhcc
Q 000789 1040 IELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKF--KLSWLRQQ 1117 (1283)
Q Consensus 1040 I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~--~~~~lR~~ 1117 (1283)
|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++... +...+|++
T Consensus 2 l~~~~l~~~~~~---~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 78 (240)
T PRK09493 2 IEFKNVSKHFGP---TQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIVDGLKVNDPKVDERLIRQE 78 (240)
T ss_pred EEEEeEEEEECC---eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCChhHHHHhhc
Confidence 789999999973 3599999999999999999999999999999999999999999999999998764 34567889
Q ss_pred eEEEccCCCCCh-hhHHHHHhcCCC--CCCCHH----HHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHH
Q 000789 1118 MGLVSQEPVLFN-ETIRTNIAYGKQ--GGATEE----EIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAI 1190 (1283)
Q Consensus 1118 i~~V~Qdp~Lf~-gTIreNl~~g~~--~~~sd~----ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlai 1190 (1283)
++|+||++.+|. .|++||+.++.. ...+.+ ++.++++..++ +.........||||||||++|
T Consensus 79 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl-----------~~~~~~~~~~LS~G~~qrv~l 147 (240)
T PRK09493 79 AGMVFQQFYLFPHLTALENVMFGPLRVRGASKEEAEKQARELLAKVGL-----------AERAHHYPSELSGGQQQRVAI 147 (240)
T ss_pred eEEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHcCC-----------hHHHhcChhhcCHHHHHHHHH
Confidence 999999998885 699999987521 112222 23344444444 333344456899999999999
Q ss_pred HHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHHHhc
Q 000789 1191 ARAVLKNPKILLLDEATSALDAESERVVQDALERVM-VNRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDALMKI 1267 (1283)
Q Consensus 1191 ARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl~~ 1267 (1283)
|||++++|++|||||||++||+++...+.+.|+++. +++|+|+|||+++.+.. ||+|++|++|++++.|+++++++.
T Consensus 148 a~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 226 (240)
T PRK09493 148 ARALAVKPKLMLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGDPQVLIKN 226 (240)
T ss_pred HHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeeCCHHHHhcC
Confidence 999999999999999999999999999999998875 47899999999999965 999999999999999999998764
No 307
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=2.2e-41 Score=369.78 Aligned_cols=204 Identities=31% Similarity=0.524 Sum_probs=175.0
Q ss_pred EEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHhcceE
Q 000789 1040 IELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMG 1119 (1283)
Q Consensus 1040 I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~ 1119 (1283)
|+++||+++|+. .++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.+||.++...+.. +++++
T Consensus 1 i~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~v~~~g~~~~~~~~~--~~~i~ 75 (213)
T cd03301 1 VELENVTKRFGN---VTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPTSGRIYIGGRDVTDLPPK--DRDIA 75 (213)
T ss_pred CEEEeeEEEECC---eeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCcc--cceEE
Confidence 578999999974 3599999999999999999999999999999999999999999999999998765543 57899
Q ss_pred EEccCCCCCh-hhHHHHHhcCCC-CCCC----HHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHHHH
Q 000789 1120 LVSQEPVLFN-ETIRTNIAYGKQ-GGAT----EEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARA 1193 (1283)
Q Consensus 1120 ~V~Qdp~Lf~-gTIreNl~~g~~-~~~s----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiARA 1193 (1283)
|+||++.+|. .|++||+.++.. ...+ ++++.++++..++.++.... ..+||||||||++||||
T Consensus 76 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qr~~lara 144 (213)
T cd03301 76 MVFQNYALYPHMTVYDNIAFGLKLRKVPKDEIDERVREVAELLQIEHLLDRK-----------PKQLSGGQRQRVALGRA 144 (213)
T ss_pred EEecChhhccCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHHHHhCC-----------hhhCCHHHHHHHHHHHH
Confidence 9999999885 699999986411 1122 23455566666666554433 34799999999999999
Q ss_pred HccCCCEEEEecccCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchHHhh-cCEEEEEeCCEEEEec
Q 000789 1194 VLKNPKILLLDEATSALDAESERVVQDALERVMV--NRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQG 1259 (1283)
Q Consensus 1194 ll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~G 1259 (1283)
++++|++|||||||++||+++.+.+.+.|+++.+ ++|+|+|||+++.+.. ||+|++|++|+++++|
T Consensus 145 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~g~~~~~g 213 (213)
T cd03301 145 IVREPKVFLMDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQVEAMTMADRIAVMNDGQIQQIG 213 (213)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 9999999999999999999999999999998753 7899999999999876 9999999999999876
No 308
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.8e-41 Score=387.18 Aligned_cols=229 Identities=24% Similarity=0.346 Sum_probs=186.5
Q ss_pred cEEEEEEEEECCCCCC-cccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCC----CCcceEEECCccCCCCChHH
Q 000789 1039 AIELRCVSFKYPTRPD-VQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYD----PDSGHVLLDNIELPKFKLSW 1113 (1283)
Q Consensus 1039 ~I~~~nVsf~Y~~~~~-~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~----~~~G~I~idG~di~~~~~~~ 1113 (1283)
-|+++||+++|+.+.. ..+|+||||+|++||.+||||+||||||||+++|+|+++ |++|+|.+||.|+.+++.+.
T Consensus 3 ~L~v~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~ 82 (326)
T PRK11022 3 LLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKE 82 (326)
T ss_pred eEEEeCeEEEECCCCccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHH
Confidence 3899999999975322 369999999999999999999999999999999999998 48999999999999888766
Q ss_pred Hhc----ceEEEccCCC--CCh-hhHHHH----HhcCC--CCCCCHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCC
Q 000789 1114 LRQ----QMGLVSQEPV--LFN-ETIRTN----IAYGK--QGGATEEEIIAATEASNAHNFISALPHGYETNVGERGVQL 1180 (1283)
Q Consensus 1114 lR~----~i~~V~Qdp~--Lf~-gTIreN----l~~g~--~~~~sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~L 1180 (1283)
+|+ .|+||||+|. ++. .|+.+| +.... ......+++.++++.+++.+... .......+|
T Consensus 83 ~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~~~~~~~~~~~~~~~~L~~~gL~~~~~--------~l~~~p~~L 154 (326)
T PRK11022 83 RRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKKTRRQRAIDLLNQVGIPDPAS--------RLDVYPHQL 154 (326)
T ss_pred HHHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChHH--------HHhCCchhC
Confidence 543 6999999994 332 355544 43211 00112345667777777753211 123445689
Q ss_pred ChhHHHHHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchHHhh-cCEEEEEeCCEEEE
Q 000789 1181 SGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMV--NRTTVVVAHRLTTIKN-ADIIAVVKNGVIAE 1257 (1283)
Q Consensus 1181 SgGQrQRlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive 1257 (1283)
|||||||++|||||+.+|++||+|||||+||+.+...|.+.|+++.+ +.|+|+|||+++.+.. ||+|+||.+|+|+|
T Consensus 155 SgGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~~~~~~adri~vm~~G~ive 234 (326)
T PRK11022 155 SGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVE 234 (326)
T ss_pred CHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE
Confidence 99999999999999999999999999999999999999999998753 7899999999999964 99999999999999
Q ss_pred ecChHHHHhccCchhHHH
Q 000789 1258 QGSHDALMKITDGAYASL 1275 (1283)
Q Consensus 1258 ~Gt~~eLl~~~~g~y~~L 1275 (1283)
.|+++++++++...|.+.
T Consensus 235 ~g~~~~~~~~p~hpyt~~ 252 (326)
T PRK11022 235 TGKAHDIFRAPRHPYTQA 252 (326)
T ss_pred ECCHHHHhhCCCChHHHH
Confidence 999999998766667643
No 309
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.5e-41 Score=377.78 Aligned_cols=222 Identities=27% Similarity=0.465 Sum_probs=189.8
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCC-----CCcceEEECCccCCC--CCh
Q 000789 1039 AIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYD-----PDSGHVLLDNIELPK--FKL 1111 (1283)
Q Consensus 1039 ~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~-----~~~G~I~idG~di~~--~~~ 1111 (1283)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|++. |++|+|.+||.++.. .+.
T Consensus 10 ~l~i~~v~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 86 (264)
T PRK14243 10 VLRTENLNVYYGS---FLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHGKNLYAPDVDP 86 (264)
T ss_pred EEEEeeeEEEECC---EEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECCEEccccccCh
Confidence 4999999999974 359999999999999999999999999999999999986 479999999998853 455
Q ss_pred HHHhcceEEEccCCCCChhhHHHHHhcCCC-CCC---CHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHH
Q 000789 1112 SWLRQQMGLVSQEPVLFNETIRTNIAYGKQ-GGA---TEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQR 1187 (1283)
Q Consensus 1112 ~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~-~~~---sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQR 1187 (1283)
..+|++++||+|++.+|+.|++||+.++.. ... .++++.++++.+++.+.+.. .....+.+||||||||
T Consensus 87 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~-------~~~~~~~~LSgGq~qr 159 (264)
T PRK14243 87 VEVRRRIGMVFQKPNPFPKSIYDNIAYGARINGYKGDMDELVERSLRQAALWDEVKD-------KLKQSGLSLSGGQQQR 159 (264)
T ss_pred HHHhhhEEEEccCCccccccHHHHHHhhhhhcCcchHHHHHHHHHHHHhCchhhHHH-------HhcCCcccCCHHHHHH
Confidence 678899999999999998999999987521 111 23445666777777655432 2344566899999999
Q ss_pred HHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcCCceEEEEecCchHHhh-cCEEEEEe---------CCEEEE
Q 000789 1188 IAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKN-ADIIAVVK---------NGVIAE 1257 (1283)
Q Consensus 1188 laiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~D~I~vl~---------~G~Ive 1257 (1283)
++|||||+++|+||||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|+ +|++++
T Consensus 160 v~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tvi~vtH~~~~~~~~~d~v~~l~~~~~~~~~~~g~i~~ 239 (264)
T PRK14243 160 LCIARAIAVQPEVILMDEPCSALDPISTLRIEELMHELKEQYTIIIVTHNMQQAARVSDMTAFFNVELTEGGGRYGYLVE 239 (264)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccccccccCceEEE
Confidence 99999999999999999999999999999999999998777899999999998866 99999998 899999
Q ss_pred ecChHHHHhccCc
Q 000789 1258 QGSHDALMKITDG 1270 (1283)
Q Consensus 1258 ~Gt~~eLl~~~~g 1270 (1283)
.|+++|+.+.+..
T Consensus 240 ~~~~~~~~~~~~~ 252 (264)
T PRK14243 240 FDRTEKIFNSPQQ 252 (264)
T ss_pred eCCHHHHHhCCCc
Confidence 9999999865433
No 310
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=1.6e-41 Score=372.36 Aligned_cols=208 Identities=38% Similarity=0.537 Sum_probs=176.1
Q ss_pred EEEEEEEEECCCCC-CCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHH----HH
Q 000789 375 IELRDVYFRYPARP-EVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLK----WI 449 (1283)
Q Consensus 375 i~~~~v~f~y~~~~-~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~----~~ 449 (1283)
|+++||+++|++.. ..++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+.. ..
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 80 (218)
T cd03255 1 IELKNLSKTYGGGGEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPTSGEVRVDGTDISKLSEKELAAFR 80 (218)
T ss_pred CeEeeeEEEecCCCcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCCceeEEECCEehhhcchhHHHHHH
Confidence 47899999996421 14699999999999999999999999999999999999999999999999998876643 24
Q ss_pred hcccEEEccCCCCCcc-cHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHH
Q 000789 450 REKIGLVSQEPILFAT-SLRENIAYGKEN--ATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIAR 526 (1283)
Q Consensus 450 r~~i~~v~Q~~~l~~~-ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiAR 526 (1283)
+++++|++|++.+|.. |++||+.++... ....+. ...+.+.++.+ |++......+.+||||||||++|||
T Consensus 81 ~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~la~ 153 (218)
T cd03255 81 RRHIGFVFQSFNLLPDLTALENVELPLLLAGVPKKER-----RERAEELLERV--GLGDRLNHYPSELSGGQQQRVAIAR 153 (218)
T ss_pred hhcEEEEeeccccCCCCcHHHHHHHHHhhcCCCHHHH-----HHHHHHHHHHc--CCchhhhcChhhcCHHHHHHHHHHH
Confidence 5789999999999876 999999986421 111111 11234455555 6766677778899999999999999
Q ss_pred HHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhccCEEEEEeCCEE
Q 000789 527 AILKNPKILLLDEATSALDAESERIVQDALVKIMT--SRTTVVVAHRLTTIRNADLIAVVHQGKI 589 (1283)
Q Consensus 527 al~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~~d~i~vl~~G~i 589 (1283)
||+.+|++|||||||++||+.+.+.+.+.|+++.+ ++|+|+|||+++.+..||++++|++|++
T Consensus 154 al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~v~~l~~G~i 218 (218)
T cd03255 154 ALANDPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPELAEYADRIIELRDGKI 218 (218)
T ss_pred HHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhcEEEEeeCCcC
Confidence 99999999999999999999999999999999864 7899999999999888999999999974
No 311
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.2e-41 Score=372.42 Aligned_cols=214 Identities=29% Similarity=0.476 Sum_probs=181.5
Q ss_pred cEEEEEEEEECCCCC-CCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHH---H
Q 000789 374 EIELRDVYFRYPARP-EVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKW---I 449 (1283)
Q Consensus 374 ~i~~~~v~f~y~~~~-~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~---~ 449 (1283)
.++++||+|+|++.. ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+... +
T Consensus 5 ~l~~~~l~~~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~ 84 (233)
T PRK11629 5 LLQCDNLCKRYQEGSVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAEL 84 (233)
T ss_pred eEEEEeEEEEcCCCCcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCHHHHHHH
Confidence 489999999997422 146999999999999999999999999999999999999999999999999998877543 3
Q ss_pred h-cccEEEccCCCCCcc-cHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHH
Q 000789 450 R-EKIGLVSQEPILFAT-SLRENIAYGKE--NATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIA 525 (1283)
Q Consensus 450 r-~~i~~v~Q~~~l~~~-ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiA 525 (1283)
+ +.++|++|++.+|+. |++||+.++.. ....++..+ .+.+.++.+ |++........+||||||||++||
T Consensus 85 ~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~LSgG~~qrl~la 157 (233)
T PRK11629 85 RNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINS-----RALEMLAAV--GLEHRANHRPSELSGGERQRVAIA 157 (233)
T ss_pred HhccEEEEecCcccCCCCCHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CCchhhhCChhhCCHHHHHHHHHH
Confidence 3 679999999998876 99999987421 112222111 223445555 677667777889999999999999
Q ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc--CCCeEEEEecCchhhhccCEEEEEeCCEEeEecC
Q 000789 526 RAILKNPKILLLDEATSALDAESERIVQDALVKIM--TSRTTVVVAHRLTTIRNADLIAVVHQGKIVEKGT 594 (1283)
Q Consensus 526 Ral~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~ 594 (1283)
||++.+|++|||||||++||+.+.+.+.+.|+++. +++|+|+|||+++.+..+|++++|++|+|++.|+
T Consensus 158 ~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~~~~~~~~~~~l~~G~i~~~~~ 228 (233)
T PRK11629 158 RALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAELS 228 (233)
T ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhhCEEEEEECCEEEEEec
Confidence 99999999999999999999999999999999874 3789999999999998889999999999998775
No 312
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.5e-41 Score=374.64 Aligned_cols=214 Identities=29% Similarity=0.450 Sum_probs=180.3
Q ss_pred EEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCC------CCChHH
Q 000789 1040 IELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELP------KFKLSW 1113 (1283)
Q Consensus 1040 I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~------~~~~~~ 1113 (1283)
|+++||+++|++ .++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.+||.++. ..+...
T Consensus 3 l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (242)
T PRK11124 3 IQLNGINCFYGA---HQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDKAIRE 79 (242)
T ss_pred EEEEeeEEEECC---eeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecccccccchhhHHH
Confidence 789999999974 35999999999999999999999999999999999999999999999999873 123456
Q ss_pred HhcceEEEccCCCCChh-hHHHHHhcCCC--CCCCH----HHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHH
Q 000789 1114 LRQQMGLVSQEPVLFNE-TIRTNIAYGKQ--GGATE----EEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQ 1186 (1283)
Q Consensus 1114 lR~~i~~V~Qdp~Lf~g-TIreNl~~g~~--~~~sd----~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQ 1186 (1283)
+|++++|+||++.+|.+ |++||+.++.. ...+. +++.+.++..++.++ +.....+|||||||
T Consensus 80 ~~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-----------~~~~~~~LS~G~~q 148 (242)
T PRK11124 80 LRRNVGMVFQQYNLWPHLTVQQNLIEAPCRVLGLSKDQALARAEKLLERLRLKPY-----------ADRFPLHLSGGQQQ 148 (242)
T ss_pred HHhheEEEecCccccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhh-----------hhCChhhCCHHHHH
Confidence 78899999999999864 99999974211 11222 233444444444433 33344589999999
Q ss_pred HHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHH
Q 000789 1187 RIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVM-VNRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDAL 1264 (1283)
Q Consensus 1187 RlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eL 1264 (1283)
|++||||++++|+||||||||++||+++...+.+.|+++. .++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 149 rv~laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 228 (242)
T PRK11124 149 RVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVEVARKTASRVVYMENGHIVEQGDASCF 228 (242)
T ss_pred HHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHh
Confidence 9999999999999999999999999999999999999875 37899999999999865 999999999999999999988
Q ss_pred Hhc
Q 000789 1265 MKI 1267 (1283)
Q Consensus 1265 l~~ 1267 (1283)
.+.
T Consensus 229 ~~~ 231 (242)
T PRK11124 229 TQP 231 (242)
T ss_pred cCc
Confidence 653
No 313
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=5.5e-41 Score=378.28 Aligned_cols=226 Identities=30% Similarity=0.421 Sum_probs=185.1
Q ss_pred EEEEEEEEECCCC------CCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChH-
Q 000789 1040 IELRCVSFKYPTR------PDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLS- 1112 (1283)
Q Consensus 1040 I~~~nVsf~Y~~~------~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~- 1112 (1283)
|+++||+++|+.. .+.++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+..
T Consensus 3 l~~~~l~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~ 82 (265)
T TIGR02769 3 LEVRDVTHTYRTGGLFGAKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPAQGTVSFRGQDLYQLDRKQ 82 (265)
T ss_pred EEEEeEEEEeccCccccccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEccccCHHH
Confidence 7899999999632 134699999999999999999999999999999999999999999999999999877654
Q ss_pred --HHhcceEEEccCCC--CC-hhhHHHHHhcCCC--CCCC----HHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCC
Q 000789 1113 --WLRQQMGLVSQEPV--LF-NETIRTNIAYGKQ--GGAT----EEEIIAATEASNAHNFISALPHGYETNVGERGVQLS 1181 (1283)
Q Consensus 1113 --~lR~~i~~V~Qdp~--Lf-~gTIreNl~~g~~--~~~s----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LS 1181 (1283)
.+|+.|+||||+|. ++ ..|++||+.+... .... ++++.++++..++.+ ......+..||
T Consensus 83 ~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~----------~~~~~~~~~LS 152 (265)
T TIGR02769 83 RRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHLTSLDESEQKARIAELLDMVGLRS----------EDADKLPRQLS 152 (265)
T ss_pred HHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCh----------hhhhCChhhCC
Confidence 36788999999983 44 4799999964210 0111 234445555544421 12334556899
Q ss_pred hhHHHHHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchHHhh-cCEEEEEeCCEEEEe
Q 000789 1182 GGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMV--NRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQ 1258 (1283)
Q Consensus 1182 gGQrQRlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~ 1258 (1283)
||||||++||||++.+|+||||||||++||+++...+.+.|+++.+ ++|+|+|||+++.+.. ||++++|++|++++.
T Consensus 153 gGe~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~ 232 (265)
T TIGR02769 153 GGQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLRLVQSFCQRVAVMDKGQIVEE 232 (265)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHHhcEEEEEeCCEEEEE
Confidence 9999999999999999999999999999999999999999998753 7899999999999975 999999999999999
Q ss_pred cChHHHHhccCchhHHH
Q 000789 1259 GSHDALMKITDGAYASL 1275 (1283)
Q Consensus 1259 Gt~~eLl~~~~g~y~~L 1275 (1283)
|+++++...++..+..+
T Consensus 233 g~~~~~~~~~~~~~~~~ 249 (265)
T TIGR02769 233 CDVAQLLSFKHPAGRNL 249 (265)
T ss_pred CCHHHHcCCCCHHHHHH
Confidence 99999987423333333
No 314
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.7e-41 Score=376.18 Aligned_cols=228 Identities=25% Similarity=0.441 Sum_probs=191.3
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCC-----CcceEEECCccCCCC--Ch
Q 000789 1039 AIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDP-----DSGHVLLDNIELPKF--KL 1111 (1283)
Q Consensus 1039 ~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~-----~~G~I~idG~di~~~--~~ 1111 (1283)
.|+++||+|+|++ .++|+|+||+|++||.++|+|+||||||||+++|+|+++| ++|+|.+||.++.+. +.
T Consensus 6 ~i~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 82 (253)
T PRK14261 6 ILSTKNLNLWYGE---KHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNGENIMDSGADV 82 (253)
T ss_pred eEEEeeeEEEECC---eeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEccccccch
Confidence 4899999999974 3599999999999999999999999999999999999763 489999999999776 45
Q ss_pred HHHhcceEEEccCCCCChhhHHHHHhcCCC-CCC-C----HHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHH
Q 000789 1112 SWLRQQMGLVSQEPVLFNETIRTNIAYGKQ-GGA-T----EEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQK 1185 (1283)
Q Consensus 1112 ~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~-~~~-s----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQr 1185 (1283)
...|+.++|+||++.+|+.|++||+.++.. .+. . ++.+.++++.+++.+.+ .+.....+.+||||||
T Consensus 83 ~~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-------~~~~~~~~~~LS~G~~ 155 (253)
T PRK14261 83 VALRRKIGMVFQRPNPFPKSIYENVAYGPRIHGEKNKKTLDTIVEKSLKGAALWDEV-------KDRLHDSALSLSGGQQ 155 (253)
T ss_pred hhhhceEEEEecCCccCcccHHHHHHhhHHhcCCCCHHHHHHHHHHHHHHhcCchhh-------HHHhhcChhhCCHHHH
Confidence 677889999999999999999999987521 011 1 23455556655554332 2334566678999999
Q ss_pred HHHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcCCceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHH
Q 000789 1186 QRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDAL 1264 (1283)
Q Consensus 1186 QRlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eL 1264 (1283)
||++||||++.+|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 156 qrv~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~tvii~sh~~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 235 (253)
T PRK14261 156 QRLCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKKEYTVIIVTHNMQQAARVSDYTGFMYLGKLIEFDKTTQI 235 (253)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhhCceEEEEEcCHHHHHhhCCEEEEEECCEEEEcCCHHHH
Confidence 9999999999999999999999999999999999999998777899999999999965 999999999999999999999
Q ss_pred HhccCchhHHHH
Q 000789 1265 MKITDGAYASLV 1276 (1283)
Q Consensus 1265 l~~~~g~y~~L~ 1276 (1283)
...+...+.+.+
T Consensus 236 ~~~~~~~~~~~~ 247 (253)
T PRK14261 236 FENPHEELTENY 247 (253)
T ss_pred HhCCCcHHHHHH
Confidence 865444444443
No 315
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.8e-41 Score=378.24 Aligned_cols=222 Identities=26% Similarity=0.465 Sum_probs=186.9
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCC-----CCcceEEECCccCCC--CCh
Q 000789 1039 AIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYD-----PDSGHVLLDNIELPK--FKL 1111 (1283)
Q Consensus 1039 ~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~-----~~~G~I~idG~di~~--~~~ 1111 (1283)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+.
T Consensus 24 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 100 (271)
T PRK14238 24 VFDTQNLNLWYGE---DHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRDQNIFDKSYSV 100 (271)
T ss_pred EEEEeeeEEEECC---cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECCEEcccccccH
Confidence 5999999999974 359999999999999999999999999999999999987 699999999999853 345
Q ss_pred HHHhcceEEEccCCCCChhhHHHHHhcCCC-CCCCH-----HHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHH
Q 000789 1112 SWLRQQMGLVSQEPVLFNETIRTNIAYGKQ-GGATE-----EEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQK 1185 (1283)
Q Consensus 1112 ~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~-~~~sd-----~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQr 1185 (1283)
..+|++++|+||+|.+|..|++||+.++.. .+.++ +.+.++++..++.+ ++.......+..||||||
T Consensus 101 ~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-------~l~~~~~~~~~~LSgGe~ 173 (271)
T PRK14238 101 EELRTNVGMVFQKPNPFPKSIYDNVTYGPKIHGIKDKKTLDEIVEKSLRGAAIWD-------ELKDRLHDNAYGLSGGQQ 173 (271)
T ss_pred HHHhhhEEEEecCCccccccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcc-------hHHHHHhcCcccCCHHHH
Confidence 677889999999999999999999986421 12222 22344444443322 222334556678999999
Q ss_pred HHHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcCCceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHH
Q 000789 1186 QRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDAL 1264 (1283)
Q Consensus 1186 QRlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eL 1264 (1283)
||++|||||+++|+||||||||++||+.+...+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 174 qrv~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g~~~~~ 253 (271)
T PRK14238 174 QRLCIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKKDYSIIIVTHNMQQAARISDKTAFFLNGYVNEYDDTDKI 253 (271)
T ss_pred HHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998778999999999999875 999999999999999999999
Q ss_pred HhccCc
Q 000789 1265 MKITDG 1270 (1283)
Q Consensus 1265 l~~~~g 1270 (1283)
...+..
T Consensus 254 ~~~~~~ 259 (271)
T PRK14238 254 FSNPSD 259 (271)
T ss_pred HcCCCC
Confidence 865433
No 316
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.3e-41 Score=381.31 Aligned_cols=219 Identities=26% Similarity=0.543 Sum_probs=185.9
Q ss_pred cEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccC--CCCHHHHhc
Q 000789 374 EIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIK--KLQLKWIRE 451 (1283)
Q Consensus 374 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~--~~~~~~~r~ 451 (1283)
.|+++||+|+|++ +.++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++. ..+...+|+
T Consensus 5 ~l~~~~l~~~~~~--~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~ 82 (283)
T PRK13636 5 ILKVEELNYNYSD--GTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPSSGRILFDGKPIDYSRKGLMKLRE 82 (283)
T ss_pred eEEEEeEEEEeCC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCccEEEECCEECCCCcchHHHHHh
Confidence 4899999999963 246999999999999999999999999999999999999999999999999984 334566788
Q ss_pred ccEEEccCC--CCCcccHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHH
Q 000789 452 KIGLVSQEP--ILFATSLRENIAYGKEN--ATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARA 527 (1283)
Q Consensus 452 ~i~~v~Q~~--~l~~~ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARa 527 (1283)
.++|++|++ .+|+.|++||+.++... .+.++..+. +.+.++.+ |+.......+.+||||||||++||||
T Consensus 83 ~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~~--gL~~~~~~~~~~LS~G~~qrl~lara 155 (283)
T PRK13636 83 SVGMVFQDPDNQLFSASVYQDVSFGAVNLKLPEDEVRKR-----VDNALKRT--GIEHLKDKPTHCLSFGQKKRVAIAGV 155 (283)
T ss_pred hEEEEecCcchhhccccHHHHHHhHHHHcCCCHHHHHHH-----HHHHHHHC--CChhhhhCCcccCCHHHHHHHHHHHH
Confidence 999999998 57888999999875321 222222111 12333444 55555667788999999999999999
Q ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHHhcC
Q 000789 528 ILKNPKILLLDEATSALDAESERIVQDALVKIMT--SRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDELIKD 601 (1283)
Q Consensus 528 l~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~ 601 (1283)
|+.+|++|||||||++||+.+...+.+.|+++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 156 L~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 232 (283)
T PRK13636 156 LVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDIDIVPLYCDNVFVMKEGRVILQGNPKEVFAE 232 (283)
T ss_pred HHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 9999999999999999999999999999998864 7899999999999874 999999999999999999998764
No 317
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.2e-41 Score=372.91 Aligned_cols=218 Identities=25% Similarity=0.407 Sum_probs=180.1
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHH-Hhcc
Q 000789 1039 AIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSW-LRQQ 1117 (1283)
Q Consensus 1039 ~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~-lR~~ 1117 (1283)
-|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+... +|+.
T Consensus 5 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 81 (237)
T PRK11614 5 MLSFDKVSAHYGK---IQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIVFDGKDITDWQTAKIMREA 81 (237)
T ss_pred EEEEEeEEEeeCC---ceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEecCCCCHHHHHHhC
Confidence 4899999999974 35999999999999999999999999999999999999999999999999998877654 6788
Q ss_pred eEEEccCCCCChh-hHHHHHhcCCCCCCCHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHHHHHcc
Q 000789 1118 MGLVSQEPVLFNE-TIRTNIAYGKQGGATEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLK 1196 (1283)
Q Consensus 1118 i~~V~Qdp~Lf~g-TIreNl~~g~~~~~sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiARAll~ 1196 (1283)
++|+||++.+|.+ |++||+.++.. ..+.++..+.++ +.+..++. ++.........||||||||++||||+++
T Consensus 82 i~~~~q~~~~~~~~tv~~~l~~~~~-~~~~~~~~~~~~-----~~l~~~~~-l~~~~~~~~~~LS~G~~qrl~la~al~~ 154 (237)
T PRK11614 82 VAIVPEGRRVFSRMTVEENLAMGGF-FAERDQFQERIK-----WVYELFPR-LHERRIQRAGTMSGGEQQMLAIGRALMS 154 (237)
T ss_pred EEEeccCcccCCCCcHHHHHHHhhh-ccChhHHHHHHH-----HHHHHHHH-HHHHHhCchhhCCHHHHHHHHHHHHHHh
Confidence 9999999999974 99999987522 112222222111 11111111 1111223445899999999999999999
Q ss_pred CCCEEEEecccCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHHHh
Q 000789 1197 NPKILLLDEATSALDAESERVVQDALERVM-VNRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDALMK 1266 (1283)
Q Consensus 1197 ~p~ILiLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl~ 1266 (1283)
+|+||||||||++||+.+.+.+.+.|+++. +++|+|++||+++.+.. ||++++|++|++++.|+++++..
T Consensus 155 ~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 226 (237)
T PRK11614 155 QPRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNANQALKLADRGYVLENGHVVLEDTGDALLA 226 (237)
T ss_pred CCCEEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHhhCCEEEEEeCCEEEeeCCHHHHhc
Confidence 999999999999999999999999999875 47899999999997755 99999999999999999999975
No 318
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.4e-41 Score=378.05 Aligned_cols=222 Identities=29% Similarity=0.438 Sum_probs=189.0
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCC-----CcceEEECCccCCC--CCh
Q 000789 1039 AIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDP-----DSGHVLLDNIELPK--FKL 1111 (1283)
Q Consensus 1039 ~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~-----~~G~I~idG~di~~--~~~ 1111 (1283)
.|+++||+++|++ .++|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.+||+++.+ .+.
T Consensus 7 ~l~~~~l~~~~~~---~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 83 (259)
T PRK14260 7 AIKVKDLSFYYNT---SKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFGQNIYDPRINI 83 (259)
T ss_pred eEEEEEEEEEECC---eEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECCEeccccccch
Confidence 5999999999973 3599999999999999999999999999999999999985 48999999999854 445
Q ss_pred HHHhcceEEEccCCCCChhhHHHHHhcCCC--CCCC----HHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHH
Q 000789 1112 SWLRQQMGLVSQEPVLFNETIRTNIAYGKQ--GGAT----EEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQK 1185 (1283)
Q Consensus 1112 ~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~--~~~s----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQr 1185 (1283)
..+|++++||||++.+|+.|++||+.++.. ...+ ++.+.++++.+++.+++..+ ....+..||||||
T Consensus 84 ~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~-------~~~~~~~LS~G~~ 156 (259)
T PRK14260 84 NRLRRQIGMVFQRPNPFPMSIYENVAYGVRISAKLPQADLDEIVESALKGAALWQEVKDK-------LNKSALGLSGGQQ 156 (259)
T ss_pred HhhhhheEEEecccccCCccHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcchhhhH-------hcCCcccCCHHHH
Confidence 678889999999999999999999976421 1112 23455677777776544322 2345568999999
Q ss_pred HHHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcCCceEEEEecCchHHhh-cCEEEEEe-----CCEEEEec
Q 000789 1186 QRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKN-ADIIAVVK-----NGVIAEQG 1259 (1283)
Q Consensus 1186 QRlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~D~I~vl~-----~G~Ive~G 1259 (1283)
||++|||||+++|++|||||||++||+.+...+.+.|+++.+++|+|+|||+++.+.. ||++++|+ +|++++.|
T Consensus 157 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~i~~~~d~i~~l~~~~~~~G~i~~~~ 236 (259)
T PRK14260 157 QRLCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRSELTIAIVTHNMQQATRVSDFTAFFSTDESRIGQMVEFG 236 (259)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCeEEEEeccCCCCceEEEeC
Confidence 9999999999999999999999999999999999999998777999999999999876 99999997 59999999
Q ss_pred ChHHHHhccCc
Q 000789 1260 SHDALMKITDG 1270 (1283)
Q Consensus 1260 t~~eLl~~~~g 1270 (1283)
+++++.+.+..
T Consensus 237 ~~~~~~~~~~~ 247 (259)
T PRK14260 237 VTTQIFSNPLD 247 (259)
T ss_pred CHHHHhcCCCC
Confidence 99999865333
No 319
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=3.3e-41 Score=391.38 Aligned_cols=213 Identities=31% Similarity=0.495 Sum_probs=177.5
Q ss_pred CcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCc----ccCCCCHHHH---h-cccEEEccCCC
Q 000789 390 VQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGI----DIKKLQLKWI---R-EKIGLVSQEPI 461 (1283)
Q Consensus 390 ~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~----~~~~~~~~~~---r-~~i~~v~Q~~~ 461 (1283)
..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|++||. ++...+...+ | ++|+||+|++.
T Consensus 37 ~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vfQ~~~ 116 (382)
T TIGR03415 37 VVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVFQKFA 116 (382)
T ss_pred EEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEECCEecccccccCCHHHHHHHhcCCEEEEECCCc
Confidence 45899999999999999999999999999999999999999999999996 6666665443 3 58999999999
Q ss_pred CCc-ccHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHhcCCCEEEEe
Q 000789 462 LFA-TSLRENIAYGKEN--ATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARAILKNPKILLLD 538 (1283)
Q Consensus 462 l~~-~ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARal~~~~~illlD 538 (1283)
+|+ .|++||+.++... .+.++.. ..+.+.++.+ |++........+||||||||++|||||+.+|+|||||
T Consensus 117 l~p~~Tv~eNi~~~~~~~g~~~~~~~-----~~a~e~le~v--gL~~~~~~~~~~LSgGq~QRV~LARALa~~P~ILLlD 189 (382)
T TIGR03415 117 LMPWLTVEENVAFGLEMQGMPEAERR-----KRVDEQLELV--GLAQWADKKPGELSGGMQQRVGLARAFAMDADILLMD 189 (382)
T ss_pred CCCCCcHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEE
Confidence 997 6999999987421 1222111 1222344444 5555555666789999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHHhcCCCChhHHH
Q 000789 539 EATSALDAESERIVQDALVKIMT--SRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDELIKDPEGPYTQL 609 (1283)
Q Consensus 539 E~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~~~~~~~~~ 609 (1283)
||||+||+.+.+.+++.|.++.+ ++|+|+|||+++.+.. ||+|++|++|++++.|++++++.++...|.+.
T Consensus 190 EPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~e~~~l~DrI~vl~~G~iv~~g~~~ei~~~p~~~~~~~ 263 (382)
T TIGR03415 190 EPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLDEALKIGNRIAIMEGGRIIQHGTPEEIVLNPANDYVAD 263 (382)
T ss_pred CCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhhCcchHHHHH
Confidence 99999999999999999998864 6899999999999854 99999999999999999999987655555543
No 320
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.2e-41 Score=371.43 Aligned_cols=206 Identities=35% Similarity=0.494 Sum_probs=175.6
Q ss_pred EEEEEEEEECCCCCC-cccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHhcce
Q 000789 1040 IELRCVSFKYPTRPD-VQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQM 1118 (1283)
Q Consensus 1040 I~~~nVsf~Y~~~~~-~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i 1118 (1283)
|+++|++++|++... .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||.++.. +++.+
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-----~~~~i 75 (220)
T cd03293 1 LEVRNVSKTYGGGGGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPTSGEVLVDGEPVTG-----PGPDR 75 (220)
T ss_pred CeEEEEEEEcCCCCcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECcc-----ccCcE
Confidence 578999999974111 469999999999999999999999999999999999999999999999998863 46789
Q ss_pred EEEccCCCCCh-hhHHHHHhcCCC-CCC----CHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHHH
Q 000789 1119 GLVSQEPVLFN-ETIRTNIAYGKQ-GGA----TEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIAR 1192 (1283)
Q Consensus 1119 ~~V~Qdp~Lf~-gTIreNl~~g~~-~~~----sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiAR 1192 (1283)
+||||+|.+|. .|++||+.++.. ... .++++.++++..++.++..+.| .+||||||||++|||
T Consensus 76 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LSgG~~qrl~la~ 144 (220)
T cd03293 76 GYVFQQDALLPWLTVLDNVALGLELQGVPKAEARERAEELLELVGLSGFENAYP-----------HQLSGGMRQRVALAR 144 (220)
T ss_pred EEEecccccccCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCCc-----------ccCCHHHHHHHHHHH
Confidence 99999999887 699999976421 111 1345666777777665544433 479999999999999
Q ss_pred HHccCCCEEEEecccCCCCHHHHHHHHHHHHHHc--CCceEEEEecCchHHhh-cCEEEEEe--CCEEEEecCh
Q 000789 1193 AVLKNPKILLLDEATSALDAESERVVQDALERVM--VNRTTVVVAHRLTTIKN-ADIIAVVK--NGVIAEQGSH 1261 (1283)
Q Consensus 1193 All~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~--~~~TvI~IaHrl~ti~~-~D~I~vl~--~G~Ive~Gt~ 1261 (1283)
||+++|++|||||||++||+.+.+.+.+.|+++. .++|+|+|||+++.+.. ||+|++|+ +|++++.++.
T Consensus 145 al~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 145 ALAVDPDVLLLDEPFSALDALTREQLQEELLDIWRETGKTVLLVTHDIDEAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred HHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCCCEEEEEEEe
Confidence 9999999999999999999999999999999874 37899999999998765 99999999 7999998865
No 321
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=3.4e-41 Score=380.58 Aligned_cols=226 Identities=29% Similarity=0.468 Sum_probs=187.8
Q ss_pred cEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHH---HHh
Q 000789 374 EIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLK---WIR 450 (1283)
Q Consensus 374 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~---~~r 450 (1283)
.|+++||+++|++ .++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|+++...+.. .++
T Consensus 7 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~ 83 (269)
T PRK11831 7 LVDMRGVSFTRGN---RCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTVR 83 (269)
T ss_pred eEEEeCeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccChhhHHHHh
Confidence 5899999999963 3699999999999999999999999999999999999999999999999998766543 356
Q ss_pred cccEEEccCCCCCcc-cHHHHHhcCCCC---CCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHH
Q 000789 451 EKIGLVSQEPILFAT-SLRENIAYGKEN---ATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIAR 526 (1283)
Q Consensus 451 ~~i~~v~Q~~~l~~~-ti~~ni~~~~~~---~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiAR 526 (1283)
++++|++|++.+|+. |+.||+.++... .+.++.. ..+.+.++.+ |++........+||||||||++|||
T Consensus 84 ~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~-----~~~~~~l~~~--gl~~~~~~~~~~LSgGq~qrv~lar 156 (269)
T PRK11831 84 KRMSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPLLH-----STVMMKLEAV--GLRGAAKLMPSELSGGMARRAALAR 156 (269)
T ss_pred hcEEEEecccccCCCCCHHHHHHHHHHHccCCCHHHHH-----HHHHHHHHHc--CChhhhhCChhhCCHHHHHHHHHHH
Confidence 789999999999986 999999874211 1221111 1122334444 5655556677899999999999999
Q ss_pred HHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHHhcCCC
Q 000789 527 AILKNPKILLLDEATSALDAESERIVQDALVKIMT--SRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDELIKDPE 603 (1283)
Q Consensus 527 al~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~~~ 603 (1283)
||+.+|++|||||||++||+.+.+.+.+.|+++.+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++.+.+.
T Consensus 157 al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~~~ 236 (269)
T PRK11831 157 AIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVPEVLSIADHAYIVADKKIVAHGSAQALQANPD 236 (269)
T ss_pred HHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhhCEEEEEECCEEEEeCCHHHHhcCCc
Confidence 99999999999999999999999999999998753 6899999999999876 99999999999999999999986533
Q ss_pred ChhHHH
Q 000789 604 GPYTQL 609 (1283)
Q Consensus 604 ~~~~~~ 609 (1283)
..+..+
T Consensus 237 ~~~~~~ 242 (269)
T PRK11831 237 PRVRQF 242 (269)
T ss_pred HHHHHH
Confidence 333333
No 322
>cd03247 ABCC_cytochrome_bd The CYD subfamily implicated in cytochrome bd biogenesis. The CydC and CydD proteins are important for the formation of cytochrome bd terminal oxidase of E. coli and it has been proposed that they were necessary for biosynthesis of the cytochrome bd quinol oxidase and for periplasmic c-type cytochromes. CydCD were proposed to determine a heterooligomeric complex important for heme export into the periplasm or to be involved in the maintenance of the proper redox state of the periplasmic space. In Bacillus subtilius, the absence of CydCD does not affect the presence of halo-cytochrome c in the membrane and this observation suggests that CydCD proteins are not involved in the export of heme in this organism.
Probab=100.00 E-value=3.2e-41 Score=357.08 Aligned_cols=178 Identities=37% Similarity=0.659 Sum_probs=165.9
Q ss_pred EEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHhcceE
Q 000789 1040 IELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMG 1119 (1283)
Q Consensus 1040 I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~ 1119 (1283)
|+++|++++|+.+ ..++++|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.+||.++... ...+|+.++
T Consensus 1 i~~~~~~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~-~~~~~~~i~ 78 (178)
T cd03247 1 LSINNVSFSYPEQ-EQQVLKNLSLELKQGEKIALLGRSGSGKSTLLQLLTGDLKPQQGEITLDGVPVSDL-EKALSSLIS 78 (178)
T ss_pred CEEEEEEEEeCCC-CccceEEEEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCEEHHHH-HHHHHhhEE
Confidence 5789999999753 23699999999999999999999999999999999999999999999999988766 567889999
Q ss_pred EEccCCCCChhhHHHHHhcCCCCCCCHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHHHHHccCCC
Q 000789 1120 LVSQEPVLFNETIRTNIAYGKQGGATEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPK 1199 (1283)
Q Consensus 1120 ~V~Qdp~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiARAll~~p~ 1199 (1283)
|+||+|.+|+.|++||+ ..+||||||||++||||++++|+
T Consensus 79 ~~~q~~~~~~~tv~~~i----------------------------------------~~~LS~G~~qrv~laral~~~p~ 118 (178)
T cd03247 79 VLNQRPYLFDTTLRNNL----------------------------------------GRRFSGGERQRLALARILLQDAP 118 (178)
T ss_pred EEccCCeeecccHHHhh----------------------------------------cccCCHHHHHHHHHHHHHhcCCC
Confidence 99999999999999997 34799999999999999999999
Q ss_pred EEEEecccCCCCHHHHHHHHHHHHHHcCCceEEEEecCchHHhhcCEEEEEeCCEEEEec
Q 000789 1200 ILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQG 1259 (1283)
Q Consensus 1200 ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~~D~I~vl~~G~Ive~G 1259 (1283)
+|||||||++||+.+.+.+.+.|++..+++|+|++||+++.+..||++++|++|++++.|
T Consensus 119 ~lllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~~~~l~~g~i~~~~ 178 (178)
T cd03247 119 IVLLDEPTVGLDPITERQLLSLIFEVLKDKTLIWITHHLTGIEHMDKILFLENGKIIMQG 178 (178)
T ss_pred EEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEecC
Confidence 999999999999999999999999887789999999999999889999999999999865
No 323
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.8e-41 Score=386.84 Aligned_cols=230 Identities=32% Similarity=0.506 Sum_probs=189.6
Q ss_pred cEEEEEEEEECCCCC-------CCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCH
Q 000789 374 EIELRDVYFRYPARP-------EVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQL 446 (1283)
Q Consensus 374 ~i~~~~v~f~y~~~~-------~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~ 446 (1283)
-|+++|++++|+... ..++|+||||+|++||++||+|+||||||||+++|+|+++|++|+|.++|+++..++.
T Consensus 5 ~l~v~nl~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~~G~i~~~g~~l~~~~~ 84 (327)
T PRK11308 5 LLQAIDLKKHYPVKRGLFKPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPTGGELYYQGQDLLKADP 84 (327)
T ss_pred eEEEeeeEEEEcCCCCccccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCCCcEEEECCEEcCcCCH
Confidence 489999999996321 2468999999999999999999999999999999999999999999999999988765
Q ss_pred H---HHhcccEEEccCCC--CCc-ccHHHHHhcCC---CCCCHHHHHHHHHHhcHHHHHHhCCCCccc-cccCCCCCCCh
Q 000789 447 K---WIREKIGLVSQEPI--LFA-TSLRENIAYGK---ENATDQEIRTAIELANAAKFIDKLPKGLDT-MAGEHGTQLSG 516 (1283)
Q Consensus 447 ~---~~r~~i~~v~Q~~~--l~~-~ti~~ni~~~~---~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t-~~~~~g~~LSg 516 (1283)
. .+|++|+||+|+|. |++ .||.+|+..+. ......+. ...+.++++.+ |++. .....+.+|||
T Consensus 85 ~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~~~~~~~~~-----~~~~~~~l~~~--gL~~~~~~~~p~~LSg 157 (327)
T PRK11308 85 EAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLINTSLSAAER-----REKALAMMAKV--GLRPEHYDRYPHMFSG 157 (327)
T ss_pred HHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHccCCCHHHH-----HHHHHHHHHHC--CCChHHhcCCCccCCH
Confidence 3 46788999999983 555 38999886421 11122211 11223444544 4532 34566789999
Q ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhc-cCEEEEEeCCEEeEec
Q 000789 517 GQKQRIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMT--SRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKG 593 (1283)
Q Consensus 517 GqkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g 593 (1283)
|||||++|||||+.+|++||+||||++||+.+...+.+.|.++.+ +.|+|+|||+++.+.. ||+|++|++|+|+|.|
T Consensus 158 Gq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~adrv~vm~~G~ive~g 237 (327)
T PRK11308 158 GQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLSVVEHIADEVMVMYLGRCVEKG 237 (327)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEC
Confidence 999999999999999999999999999999999999999998854 7899999999999976 9999999999999999
Q ss_pred ChhHHhcCCCChhHHHH
Q 000789 594 THDELIKDPEGPYTQLV 610 (1283)
Q Consensus 594 ~~~~l~~~~~~~~~~~~ 610 (1283)
+.+++++++...|.+..
T Consensus 238 ~~~~~~~~p~hpyt~~l 254 (327)
T PRK11308 238 TKEQIFNNPRHPYTQAL 254 (327)
T ss_pred CHHHHhcCCCCHHHHHH
Confidence 99999987666776643
No 324
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=4.4e-41 Score=390.31 Aligned_cols=209 Identities=29% Similarity=0.441 Sum_probs=178.2
Q ss_pred cccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCc----cCCCCChHHHh----cceEEEccCCC
Q 000789 1055 VQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNI----ELPKFKLSWLR----QQMGLVSQEPV 1126 (1283)
Q Consensus 1055 ~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~----di~~~~~~~lR----~~i~~V~Qdp~ 1126 (1283)
..+|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|++||. ++.+.+...+| ++|+||||++.
T Consensus 37 ~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vfQ~~~ 116 (382)
T TIGR03415 37 VVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVFQKFA 116 (382)
T ss_pred EEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEECCEecccccccCCHHHHHHHhcCCEEEEECCCc
Confidence 35899999999999999999999999999999999999999999999996 67777655543 58999999999
Q ss_pred CCh-hhHHHHHhcCCC-CCCC----HHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHHHHHccCCCE
Q 000789 1127 LFN-ETIRTNIAYGKQ-GGAT----EEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKI 1200 (1283)
Q Consensus 1127 Lf~-gTIreNl~~g~~-~~~s----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiARAll~~p~I 1200 (1283)
+|+ .|++||+.++.. ...+ .+.+.++++.+++.++....| .+||||||||++|||||+++|+|
T Consensus 117 l~p~~Tv~eNi~~~~~~~g~~~~~~~~~a~e~le~vgL~~~~~~~~-----------~~LSgGq~QRV~LARALa~~P~I 185 (382)
T TIGR03415 117 LMPWLTVEENVAFGLEMQGMPEAERRKRVDEQLELVGLAQWADKKP-----------GELSGGMQQRVGLARAFAMDADI 185 (382)
T ss_pred CCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhcCCh-----------hhCCHHHHHHHHHHHHHhcCCCE
Confidence 997 799999987521 1122 234566777777766544333 47999999999999999999999
Q ss_pred EEEecccCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHHHhccCchhHH
Q 000789 1201 LLLDEATSALDAESERVVQDALERVMV--NRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDALMKITDGAYAS 1274 (1283)
Q Consensus 1201 LiLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl~~~~g~y~~ 1274 (1283)
||||||||+||+.+...+++.|.++.+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++|++.++.+.|.+
T Consensus 186 LLlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~e~~~l~DrI~vl~~G~iv~~g~~~ei~~~p~~~~~~ 262 (382)
T TIGR03415 186 LLMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLDEALKIGNRIAIMEGGRIIQHGTPEEIVLNPANDYVA 262 (382)
T ss_pred EEEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhhCcchHHHH
Confidence 999999999999999999999998754 7899999999999755 9999999999999999999998765555543
No 325
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.5e-41 Score=380.59 Aligned_cols=218 Identities=30% Similarity=0.504 Sum_probs=182.7
Q ss_pred EEEEEEEEECCCCC--CcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCC----ChHH
Q 000789 1040 IELRCVSFKYPTRP--DVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKF----KLSW 1113 (1283)
Q Consensus 1040 I~~~nVsf~Y~~~~--~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~----~~~~ 1113 (1283)
|+++||+++|+... ..++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.+||.++... +...
T Consensus 3 l~~~~l~~~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (280)
T PRK13649 3 INLQNVSYTYQAGTPFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPTQGSVRVDDTLITSTSKNKDIKQ 82 (280)
T ss_pred EEEEEEEEEcCCCCccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccCHHH
Confidence 78999999997431 13699999999999999999999999999999999999999999999999998764 3467
Q ss_pred HhcceEEEccCC--CCChhhHHHHHhcCCC-CCCCHHHH----HHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHH
Q 000789 1114 LRQQMGLVSQEP--VLFNETIRTNIAYGKQ-GGATEEEI----IAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQ 1186 (1283)
Q Consensus 1114 lR~~i~~V~Qdp--~Lf~gTIreNl~~g~~-~~~sd~ei----~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQ 1186 (1283)
+|+.|+|+||+| .+|+.|++||+.++.. ...+.++. .++++..++.+ ........+|||||||
T Consensus 83 ~~~~i~~~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~----------~~~~~~~~~LSgG~~q 152 (280)
T PRK13649 83 IRKKVGLVFQFPESQLFEETVLKDVAFGPQNFGVSQEEAEALAREKLALVGISE----------SLFEKNPFELSGGQMR 152 (280)
T ss_pred HHhheEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCh----------hhhhCCcccCCHHHHH
Confidence 889999999998 6888999999986421 12333333 33334433321 1223445689999999
Q ss_pred HHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHH
Q 000789 1187 RIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVM-VNRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDAL 1264 (1283)
Q Consensus 1187 RlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eL 1264 (1283)
|++|||||+++|++|||||||++||+++.+.+.+.|+++. .++|+|+|||+++.+.. ||++++|++|++++.|+++++
T Consensus 153 rv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 232 (280)
T PRK13649 153 RVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMDDVANYADFVYVLEKGKLVLSGKPKDI 232 (280)
T ss_pred HHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999875 37899999999999865 999999999999999999998
Q ss_pred Hhc
Q 000789 1265 MKI 1267 (1283)
Q Consensus 1265 l~~ 1267 (1283)
.+.
T Consensus 233 ~~~ 235 (280)
T PRK13649 233 FQD 235 (280)
T ss_pred hcC
Confidence 763
No 326
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=1.9e-41 Score=367.73 Aligned_cols=199 Identities=30% Similarity=0.521 Sum_probs=169.2
Q ss_pred EEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHHhcccEE
Q 000789 376 ELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWIREKIGL 455 (1283)
Q Consensus 376 ~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~ 455 (1283)
+++|++++|++. .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. ...+++++|
T Consensus 1 ~~~~l~~~~~~~--~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~---~~~~~~i~~ 75 (205)
T cd03226 1 RIENISFSYKKG--TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKESSGSILLNGKPIKA---KERRKSIGY 75 (205)
T ss_pred CcccEEEEeCCc--CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEhhh---HHhhcceEE
Confidence 368999999641 469999999999999999999999999999999999999999999999998754 456778999
Q ss_pred EccCC--CCCcccHHHHHhcCCCCCC--HHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHhcC
Q 000789 456 VSQEP--ILFATSLRENIAYGKENAT--DQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARAILKN 531 (1283)
Q Consensus 456 v~Q~~--~l~~~ti~~ni~~~~~~~~--~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARal~~~ 531 (1283)
++|++ .+++.|++||+.++.+... .+++.++++.. |++.........||||||||++|||||+.+
T Consensus 76 ~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~-----------~l~~~~~~~~~~LS~G~~qrv~laral~~~ 144 (205)
T cd03226 76 VMQDVDYQLFTDSVREELLLGLKELDAGNEQAETVLKDL-----------DLYALKERHPLSLSGGQKQRLAIAAALLSG 144 (205)
T ss_pred EecChhhhhhhccHHHHHhhhhhhcCccHHHHHHHHHHc-----------CCchhcCCCchhCCHHHHHHHHHHHHHHhC
Confidence 99998 4678899999998643222 23344444444 444444455568999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhc-cCEEEEEeCCEEe
Q 000789 532 PKILLLDEATSALDAESERIVQDALVKIM-TSRTTVVVAHRLTTIRN-ADLIAVVHQGKIV 590 (1283)
Q Consensus 532 ~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~ 590 (1283)
|++|||||||++||+.+.+.+.+.|+++. +++|+|++||+++.+.. ||+|++|++|+++
T Consensus 145 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~iv 205 (205)
T cd03226 145 KDLLIFDEPTSGLDYKNMERVGELIRELAAQGKAVIVITHDYEFLAKVCDRVLLLANGAIV 205 (205)
T ss_pred CCEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEC
Confidence 99999999999999999999999999874 56899999999999875 9999999999985
No 327
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.5e-41 Score=376.87 Aligned_cols=221 Identities=29% Similarity=0.488 Sum_probs=185.0
Q ss_pred cEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCC--C---CCceEEECCcccCC--CCH
Q 000789 374 EIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYD--P---DAGEVLIDGIDIKK--LQL 446 (1283)
Q Consensus 374 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~--~---~~G~i~~~g~~~~~--~~~ 446 (1283)
.|+++||+|.|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++ | ++|+|.++|+++.. .+.
T Consensus 12 ~l~i~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~ 88 (259)
T PRK14274 12 VYQINGMNLWYGQ---HHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDL 88 (259)
T ss_pred eEEEeeEEEEECC---eeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCH
Confidence 5899999999963 359999999999999999999999999999999999997 3 59999999999864 345
Q ss_pred HHHhcccEEEccCCCCCcccHHHHHhcCCCCC---CHHH----HHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHH
Q 000789 447 KWIREKIGLVSQEPILFATSLRENIAYGKENA---TDQE----IRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQK 519 (1283)
Q Consensus 447 ~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~---~~~~----~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqk 519 (1283)
..+|+.++|++|++.+|+.|++||+.++.... .+++ +.++++..++.++ +.+.....+.+||||||
T Consensus 89 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~~l~~~~~~LS~Gq~ 161 (259)
T PRK14274 89 VELRKNIGMVFQKGNPFPQSIFDNVAYGPRIHGTKNKKKLQEIVEKSLKDVALWDE-------VKDRLHTQALSLSGGQQ 161 (259)
T ss_pred HHHhhceEEEecCCcccccCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchh-------hhhhhhCCcccCCHHHH
Confidence 56788999999999999999999998753211 1222 2222333322221 12345667789999999
Q ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHH
Q 000789 520 QRIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMTSRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDEL 598 (1283)
Q Consensus 520 qriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l 598 (1283)
||++|||||+++|++|||||||++||+.+...+.+.|.++.+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 162 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 241 (259)
T PRK14274 162 QRLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKEKYTIVIVTHNMQQAARVSDQTAFFYMGELVECNDTNKM 241 (259)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 9999999999999999999999999999999999999998777899999999999865 999999999999999999998
Q ss_pred hcCCCC
Q 000789 599 IKDPEG 604 (1283)
Q Consensus 599 ~~~~~~ 604 (1283)
..++..
T Consensus 242 ~~~~~~ 247 (259)
T PRK14274 242 FSNPDD 247 (259)
T ss_pred hhCCCC
Confidence 765433
No 328
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=4.3e-41 Score=379.17 Aligned_cols=220 Identities=32% Similarity=0.484 Sum_probs=184.7
Q ss_pred EEEEEEEEECCCC------CCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHH-
Q 000789 375 IELRDVYFRYPAR------PEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLK- 447 (1283)
Q Consensus 375 i~~~~v~f~y~~~------~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~- 447 (1283)
|+++||+|.|++. .++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+..
T Consensus 3 l~~~~l~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~ 82 (265)
T TIGR02769 3 LEVRDVTHTYRTGGLFGAKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPAQGTVSFRGQDLYQLDRKQ 82 (265)
T ss_pred EEEEeEEEEeccCccccccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEccccCHHH
Confidence 7899999999631 134699999999999999999999999999999999999999999999999999877654
Q ss_pred --HHhcccEEEccCCC--CCc-ccHHHHHhcCCC---CCCHHHHHHHHHHhcHHHHHHhCCCCcc-ccccCCCCCCChHH
Q 000789 448 --WIREKIGLVSQEPI--LFA-TSLRENIAYGKE---NATDQEIRTAIELANAAKFIDKLPKGLD-TMAGEHGTQLSGGQ 518 (1283)
Q Consensus 448 --~~r~~i~~v~Q~~~--l~~-~ti~~ni~~~~~---~~~~~~~~~~~~~~~~~~~i~~lp~g~~-t~~~~~g~~LSgGq 518 (1283)
.+|+.|+|++|++. ++. .|++||+.++.. ....++ ....+.+.++.+ |++ ......+..|||||
T Consensus 83 ~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~-----~~~~~~~~l~~~--gl~~~~~~~~~~~LSgGe 155 (265)
T TIGR02769 83 RRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHLTSLDESE-----QKARIAELLDMV--GLRSEDADKLPRQLSGGQ 155 (265)
T ss_pred HHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHhcCCCHHH-----HHHHHHHHHHHc--CCChhhhhCChhhCCHHH
Confidence 35778999999983 443 699999975421 111111 111233455555 665 45677788999999
Q ss_pred HHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhc-cCEEEEEeCCEEeEecCh
Q 000789 519 KQRIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMT--SRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTH 595 (1283)
Q Consensus 519 kqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~ 595 (1283)
|||++|||||+.+|++|||||||++||+.+++.+.+.|+++.+ ++|+|+|||+++.+.. ||++++|++|++++.|++
T Consensus 156 ~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~ 235 (265)
T TIGR02769 156 LQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLRLVQSFCQRVAVMDKGQIVEECDV 235 (265)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHHhcEEEEEeCCEEEEECCH
Confidence 9999999999999999999999999999999999999998764 7899999999999975 999999999999999999
Q ss_pred hHHhcC
Q 000789 596 DELIKD 601 (1283)
Q Consensus 596 ~~l~~~ 601 (1283)
+++...
T Consensus 236 ~~~~~~ 241 (265)
T TIGR02769 236 AQLLSF 241 (265)
T ss_pred HHHcCC
Confidence 999864
No 329
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5e-41 Score=377.34 Aligned_cols=223 Identities=31% Similarity=0.513 Sum_probs=185.5
Q ss_pred cEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCC-----CCceEEECCcccCCC--CH
Q 000789 374 EIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDP-----DAGEVLIDGIDIKKL--QL 446 (1283)
Q Consensus 374 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~~~--~~ 446 (1283)
.|+++|+++.|++ .++|+|+||+|++||++||+||||||||||+++|+|+++| ++|+|.++|+++... +.
T Consensus 12 ~l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 88 (258)
T PRK14268 12 QIKVENLNLWYGE---KQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDV 88 (258)
T ss_pred eEEEeeeEEEeCC---eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchH
Confidence 5999999999963 3599999999999999999999999999999999999985 799999999988643 23
Q ss_pred HHHhcccEEEccCCCCCcccHHHHHhcCCC--CCCHHH----HHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHH
Q 000789 447 KWIREKIGLVSQEPILFATSLRENIAYGKE--NATDQE----IRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQ 520 (1283)
Q Consensus 447 ~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~--~~~~~~----~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkq 520 (1283)
..+++.++|++|++.+|+.|++||+.++.. ..+.++ +.++++.+++.+ ...........+|||||||
T Consensus 89 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~~~~~~~~~~~~LSgG~~q 161 (258)
T PRK14268 89 VELRKNVGMVFQKPNPFPMSIYDNVAYGPRIHGANKKDLDGVVENALRSAALWD-------ETSDRLKSPALSLSGGQQQ 161 (258)
T ss_pred HHHhhhEEEEecCCccCcccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCc-------chhhhhcCChhhCCHHHHH
Confidence 456788999999999999999999987532 122222 222333222211 1123455677899999999
Q ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHHh
Q 000789 521 RIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMTSRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDELI 599 (1283)
Q Consensus 521 riaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~ 599 (1283)
|++|||||+.+|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 162 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 241 (258)
T PRK14268 162 RLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKKDYTIVIVTHNMQQAARISDYTGFFLMGELIEFGQTRQIF 241 (258)
T ss_pred HHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999999999998777999999999999865 9999999999999999999997
Q ss_pred cCCCChh
Q 000789 600 KDPEGPY 606 (1283)
Q Consensus 600 ~~~~~~~ 606 (1283)
.++...|
T Consensus 242 ~~~~~~~ 248 (258)
T PRK14268 242 HNPREKS 248 (258)
T ss_pred cCCCCHH
Confidence 6544443
No 330
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.6e-42 Score=341.34 Aligned_cols=217 Identities=31% Similarity=0.526 Sum_probs=187.3
Q ss_pred EEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHHhcccE
Q 000789 375 IELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWIREKIG 454 (1283)
Q Consensus 375 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 454 (1283)
+++.+++++|++ ...+++||||+++.||+++|.|||||||||++++|..++.|++|.|++||.|.... +...|++||
T Consensus 2 l~v~~l~K~y~~--~v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~~G~v~idg~d~~~~-p~~vrr~IG 78 (245)
T COG4555 2 LEVTDLTKSYGS--KVQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPDSGKVTIDGVDTVRD-PSFVRRKIG 78 (245)
T ss_pred eeeeehhhhccC--HHhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCCCceEEEeecccccC-hHHHhhhcc
Confidence 688999999975 34589999999999999999999999999999999999999999999999998765 456788999
Q ss_pred EEccCCCCCcc-cHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHhcC
Q 000789 455 LVSQEPILFAT-SLRENIAYGKEN--ATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARAILKN 531 (1283)
Q Consensus 455 ~v~Q~~~l~~~-ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARal~~~ 531 (1283)
+++-+..++.. |++|||.|...- .+..++ .+.+++..+.| +++..+..+..++|-|+||||+|||||++|
T Consensus 79 Vl~~e~glY~RlT~rEnl~~Fa~L~~l~~~~~-----kari~~l~k~l--~l~~~~~rRv~~~S~G~kqkV~iARAlvh~ 151 (245)
T COG4555 79 VLFGERGLYARLTARENLKYFARLNGLSRKEI-----KARIAELSKRL--QLLEYLDRRVGEFSTGMKQKVAIARALVHD 151 (245)
T ss_pred eecCCcChhhhhhHHHHHHHHHHHhhhhhhHH-----HHHHHHHHHHh--ChHHHHHHHHhhhchhhHHHHHHHHHHhcC
Confidence 99988888865 999999985321 112221 22333444555 666667777789999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHcC-CCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHHhcC
Q 000789 532 PKILLLDEATSALDAESERIVQDALVKIMT-SRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDELIKD 601 (1283)
Q Consensus 532 ~~illlDE~ts~lD~~~~~~i~~~l~~~~~-~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~ 601 (1283)
|++++||||||+||..+.+.+++.+.++.. ++++|+.||.++.++. ||+|+++++|+++..|+.+++.++
T Consensus 152 P~i~vlDEP~sGLDi~~~r~~~dfi~q~k~egr~viFSSH~m~EvealCDrvivlh~Gevv~~gs~~~l~~r 223 (245)
T COG4555 152 PSILVLDEPTSGLDIRTRRKFHDFIKQLKNEGRAVIFSSHIMQEVEALCDRVIVLHKGEVVLEGSIEALDAR 223 (245)
T ss_pred CCeEEEcCCCCCccHHHHHHHHHHHHHhhcCCcEEEEecccHHHHHHhhheEEEEecCcEEEcCCHHHHHHH
Confidence 999999999999999999999999999875 8999999999999985 999999999999999999988654
No 331
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=3.1e-41 Score=370.04 Aligned_cols=211 Identities=28% Similarity=0.535 Sum_probs=178.2
Q ss_pred EEEEEEEEECCCCCC-CcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHHhccc
Q 000789 375 IELRDVYFRYPARPE-VQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWIREKI 453 (1283)
Q Consensus 375 i~~~~v~f~y~~~~~-~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 453 (1283)
|+++||+++|++... .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++.. ....+++++
T Consensus 2 l~~~~v~~~~~~~~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-~~~~~~~~i 80 (218)
T cd03266 2 ITADALTKRFRDVKKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPDAGFATVDGFDVVK-EPAEARRRL 80 (218)
T ss_pred eEEEEEEEecCCCCccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEEccc-CHHHHHhhE
Confidence 689999999974311 269999999999999999999999999999999999999999999999999875 345678899
Q ss_pred EEEccCCCCCcc-cHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHhc
Q 000789 454 GLVSQEPILFAT-SLRENIAYGKE--NATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARAILK 530 (1283)
Q Consensus 454 ~~v~Q~~~l~~~-ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARal~~ 530 (1283)
+|++|++.+|.. |++||+.+... ....++..+ .+.+.++.+ |++......+.+||||||||++||||++.
T Consensus 81 ~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~laral~~ 153 (218)
T cd03266 81 GFVSDSTGLYDRLTARENLEYFAGLYGLKGDELTA-----RLEELADRL--GMEELLDRRVGGFSTGMRQKVAIARALVH 153 (218)
T ss_pred EEecCCcccCcCCCHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CCHHHHhhhhhhcCHHHHHHHHHHHHHhc
Confidence 999999999985 99999986422 112222111 223445555 66666677788999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhc-cCEEEEEeCCEEeEec
Q 000789 531 NPKILLLDEATSALDAESERIVQDALVKIM-TSRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKG 593 (1283)
Q Consensus 531 ~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g 593 (1283)
+|++|||||||++||+.+.+.+.+.|+++. +++|+|+|||+++.+.. ||++++|++|++++.|
T Consensus 154 ~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~i~~~~ 218 (218)
T cd03266 154 DPPVLLLDEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQEVERLCDRVVVLHRGRVVYEG 218 (218)
T ss_pred CCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhcCEEEEEECCEEeecC
Confidence 999999999999999999999999999875 47899999999999875 9999999999998764
No 332
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.6e-41 Score=367.41 Aligned_cols=203 Identities=29% Similarity=0.515 Sum_probs=174.0
Q ss_pred EEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHHhcccE
Q 000789 375 IELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWIREKIG 454 (1283)
Q Consensus 375 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 454 (1283)
|+++||+|.|++ .++|+|+||++++| +++|+||||||||||+++|+|+++|++|+|.++|.++.+.+ ..+++.++
T Consensus 1 i~~~~~~~~~~~---~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~-~~~~~~i~ 75 (211)
T cd03264 1 LQLENLTKRYGK---KRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPSSGTIRIDGQDVLKQP-QKLRRRIG 75 (211)
T ss_pred CEEEEEEEEECC---EEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCCccccch-HHHHhheE
Confidence 578999999963 36999999999999 99999999999999999999999999999999999988766 66788999
Q ss_pred EEccCCCCCcc-cHHHHHhcCCC--CCCH----HHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHH
Q 000789 455 LVSQEPILFAT-SLRENIAYGKE--NATD----QEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARA 527 (1283)
Q Consensus 455 ~v~Q~~~l~~~-ti~~ni~~~~~--~~~~----~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARa 527 (1283)
|++|++.+|.. |++||+.+... ..+. +++.++++..++. ........+||||||||++||||
T Consensus 76 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LS~G~~qrv~la~a 144 (211)
T cd03264 76 YLPQEFGVYPNFTVREFLDYIAWLKGIPSKEVKARVDEVLELVNLG-----------DRAKKKIGSLSGGMRRRVGIAQA 144 (211)
T ss_pred EecCCCcccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCH-----------HHHhCchhhCCHHHHHHHHHHHH
Confidence 99999999886 99999987421 1111 2233444444433 33344557899999999999999
Q ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhc-cCEEEEEeCCEEeEec
Q 000789 528 ILKNPKILLLDEATSALDAESERIVQDALVKIMTSRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKG 593 (1283)
Q Consensus 528 l~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g 593 (1283)
|+++|++|||||||++||+.+.+.+.+.|+++.+++|+|+|||+++.+.. ||++++|++|++++.|
T Consensus 145 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~g~i~~~g 211 (211)
T cd03264 145 LVGDPSILIVDEPTAGLDPEERIRFRNLLSELGEDRIVILSTHIVEDVESLCNQVAVLNKGKLVFEG 211 (211)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEecC
Confidence 99999999999999999999999999999998777999999999999865 9999999999998765
No 333
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.6e-41 Score=377.47 Aligned_cols=221 Identities=33% Similarity=0.509 Sum_probs=186.4
Q ss_pred ccEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCC-----CCCceEEECCcccCC--CC
Q 000789 373 GEIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYD-----PDAGEVLIDGIDIKK--LQ 445 (1283)
Q Consensus 373 ~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~~~g~~~~~--~~ 445 (1283)
..|+++||+++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|.++.. .+
T Consensus 12 ~~l~i~nl~~~~~~---~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~~~ 88 (269)
T PRK14259 12 IIISLQNVTISYGT---FEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPRVD 88 (269)
T ss_pred ceEEEEeEEEEECC---EEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccCC
Confidence 46999999999963 359999999999999999999999999999999999987 699999999998853 45
Q ss_pred HHHHhcccEEEccCCCCCcccHHHHHhcCCCC--CC---HHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHH
Q 000789 446 LKWIREKIGLVSQEPILFATSLRENIAYGKEN--AT---DQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQ 520 (1283)
Q Consensus 446 ~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~--~~---~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkq 520 (1283)
...+|++++||+|++.+|..|++||+.++... .. ++++.++++..++. .++++.......+|||||||
T Consensus 89 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~-------~~l~~~~~~~~~~LS~G~~q 161 (269)
T PRK14259 89 PVEVRRRIGMVFQQPNPFPKSIYENIAFGARINGYTGDMDELVERSLRKAAVW-------DECKDKLNESGYSLSGGQQQ 161 (269)
T ss_pred HHHHhhceEEEccCCccchhhHHHHHhhhhhhcCCcHHHHHHHHHHHHHhCCc-------chhhhhhCCCcccCCHHHHH
Confidence 66778899999999999988999999986431 11 12233333333322 12334556677899999999
Q ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhc-cCEEEEEeC-----------CE
Q 000789 521 RIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMTSRTTVVVAHRLTTIRN-ADLIAVVHQ-----------GK 588 (1283)
Q Consensus 521 riaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~-----------G~ 588 (1283)
|++|||||+++|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||++++|++ |+
T Consensus 162 rl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~~~~~~~~~g~~g~ 241 (269)
T PRK14259 162 RLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKKNFTIVIVTHNMQQAVRVSDMTAFFNAEEVEGGSGGKVGY 241 (269)
T ss_pred HHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeccccccccccccce
Confidence 999999999999999999999999999999999999998777899999999999865 999999996 67
Q ss_pred EeEecChhHHhcCCC
Q 000789 589 IVEKGTHDELIKDPE 603 (1283)
Q Consensus 589 i~~~g~~~~l~~~~~ 603 (1283)
+++.|+.+++...+.
T Consensus 242 ~~~~~~~~~~~~~~~ 256 (269)
T PRK14259 242 LVEFNETKKIFNSPK 256 (269)
T ss_pred EEEeCCHHHHHhCcC
Confidence 999999999976543
No 334
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=3e-41 Score=369.06 Aligned_cols=202 Identities=31% Similarity=0.497 Sum_probs=175.2
Q ss_pred EEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChH---HHhc
Q 000789 1040 IELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLS---WLRQ 1116 (1283)
Q Consensus 1040 I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~---~lR~ 1116 (1283)
|+++|++++|+. +.++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++.+++.. .+|+
T Consensus 2 l~~~~l~~~~~~--~~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (214)
T TIGR02673 2 IEFHNVSKAYPG--GVAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPSRGQVRIAGEDVNRLRGRQLPLLRR 79 (214)
T ss_pred EEEEeeeEEeCC--CceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHHh
Confidence 789999999952 24699999999999999999999999999999999999999999999999999877643 4688
Q ss_pred ceEEEccCCCCCh-hhHHHHHhcCCC-----CCCCHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHH
Q 000789 1117 QMGLVSQEPVLFN-ETIRTNIAYGKQ-----GGATEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAI 1190 (1283)
Q Consensus 1117 ~i~~V~Qdp~Lf~-gTIreNl~~g~~-----~~~sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlai 1190 (1283)
.++|+||+|.+|. .|++||+.++.. ....++++.++++..++.+.....| .+||||||||++|
T Consensus 80 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrl~l 148 (214)
T TIGR02673 80 RIGVVFQDFRLLPDRTVYENVALPLEVRGKKEREIQRRVGAALRQVGLEHKADAFP-----------EQLSGGEQQRVAI 148 (214)
T ss_pred heEEEecChhhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCCh-----------hhCCHHHHHHHHH
Confidence 9999999999885 699999976411 1112356777788877766554433 4799999999999
Q ss_pred HHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchHHhh-cCEEEEEeCCE
Q 000789 1191 ARAVLKNPKILLLDEATSALDAESERVVQDALERVM-VNRTTVVVAHRLTTIKN-ADIIAVVKNGV 1254 (1283)
Q Consensus 1191 ARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHrl~ti~~-~D~I~vl~~G~ 1254 (1283)
||||+++|++|||||||++||+.+...+.+.|+++. +++|+|+|||+++.+.. ||+|++|++|+
T Consensus 149 a~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~ 214 (214)
T TIGR02673 149 ARAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLSLVDRVAHRVIILDDGR 214 (214)
T ss_pred HHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEecCCC
Confidence 999999999999999999999999999999999874 47899999999999986 99999999985
No 335
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-40 Score=374.30 Aligned_cols=214 Identities=28% Similarity=0.425 Sum_probs=186.2
Q ss_pred EEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHhcceE
Q 000789 1040 IELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMG 1119 (1283)
Q Consensus 1040 I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~ 1119 (1283)
|+++||+++|++ .++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.+||.++.+.+...+++.++
T Consensus 3 l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (258)
T PRK13548 3 LEARNLSVRLGG---RTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPDSGEVRLNGRPLADWSPAELARRRA 79 (258)
T ss_pred EEEEeEEEEeCC---eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcccCCHHHhhhheE
Confidence 789999999974 35999999999999999999999999999999999999999999999999998888778888999
Q ss_pred EEccCCCC-ChhhHHHHHhcCCCCC-C----CHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHHHH
Q 000789 1120 LVSQEPVL-FNETIRTNIAYGKQGG-A----TEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARA 1193 (1283)
Q Consensus 1120 ~V~Qdp~L-f~gTIreNl~~g~~~~-~----sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiARA 1193 (1283)
|+||++.+ +..|++||+.++.... . .++++.++++..++.++..+ ....||||||||++||||
T Consensus 80 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LSgGe~qrv~la~a 148 (258)
T PRK13548 80 VLPQHSSLSFPFTVEEVVAMGRAPHGLSRAEDDALVAAALAQVDLAHLAGR-----------DYPQLSGGEQQRVQLARV 148 (258)
T ss_pred EEccCCcCCCCCCHHHHHHhhhcccCCCcHHHHHHHHHHHHHcCCHhHhcC-----------CcccCCHHHHHHHHHHHH
Confidence 99999987 6789999998752211 1 13345667777666554332 335899999999999999
Q ss_pred Hc------cCCCEEEEecccCCCCHHHHHHHHHHHHHHc--CCceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHH
Q 000789 1194 VL------KNPKILLLDEATSALDAESERVVQDALERVM--VNRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDAL 1264 (1283)
Q Consensus 1194 ll------~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~--~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eL 1264 (1283)
|+ .+|++|||||||++||+.+...+.+.|+++. .++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 149 l~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 228 (258)
T PRK13548 149 LAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLNLAARYADRIVLLHQGRLVADGTPAEV 228 (258)
T ss_pred HhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhcCEEEEEECCEEEeeCCHHHH
Confidence 99 5999999999999999999999999999875 47899999999999875 999999999999999999998
Q ss_pred Hhc
Q 000789 1265 MKI 1267 (1283)
Q Consensus 1265 l~~ 1267 (1283)
.+.
T Consensus 229 ~~~ 231 (258)
T PRK13548 229 LTP 231 (258)
T ss_pred hCh
Confidence 763
No 336
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=6.2e-41 Score=370.70 Aligned_cols=213 Identities=27% Similarity=0.427 Sum_probs=179.6
Q ss_pred EEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHH-Hhcce
Q 000789 1040 IELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSW-LRQQM 1118 (1283)
Q Consensus 1040 I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~-lR~~i 1118 (1283)
|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+... +++++
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (230)
T TIGR03410 1 LEVSNLNVYYGQ---SHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVKSGSIRLDGEDITKLPPHERARAGI 77 (230)
T ss_pred CEEEeEEEEeCC---eEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHHhCe
Confidence 578999999974 35999999999999999999999999999999999999999999999999998877554 46789
Q ss_pred EEEccCCCCChh-hHHHHHhcCCCC-CCCHHH-HHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHHHHHc
Q 000789 1119 GLVSQEPVLFNE-TIRTNIAYGKQG-GATEEE-IIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVL 1195 (1283)
Q Consensus 1119 ~~V~Qdp~Lf~g-TIreNl~~g~~~-~~sd~e-i~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiARAll 1195 (1283)
+|+||++.+|.. |++||+.++... ...+++ ..++++..+ +++........+||||||||++||||++
T Consensus 78 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~l~~~~----------~l~~~~~~~~~~LS~G~~qrv~la~al~ 147 (230)
T TIGR03410 78 AYVPQGREIFPRLTVEENLLTGLAALPRRSRKIPDEIYELFP----------VLKEMLGRRGGDLSGGQQQQLAIARALV 147 (230)
T ss_pred EEeccCCcccCCCcHHHHHHHHHHhcCcchHHHHHHHHHHHH----------hHHHHhhCChhhCCHHHHHHHHHHHHHh
Confidence 999999999976 999999865211 112222 222333222 1222334445689999999999999999
Q ss_pred cCCCEEEEecccCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHHH
Q 000789 1196 KNPKILLLDEATSALDAESERVVQDALERVMV--NRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDALM 1265 (1283)
Q Consensus 1196 ~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl 1265 (1283)
++|++|||||||++||+.+...+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 148 ~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~g~i~~~~~~~~~~ 220 (230)
T TIGR03410 148 TRPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLDFARELADRYYVMERGRVVASGAGDELD 220 (230)
T ss_pred cCCCEEEecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHcC
Confidence 99999999999999999999999999998764 7899999999999986 9999999999999999999983
No 337
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=3.6e-41 Score=385.54 Aligned_cols=218 Identities=27% Similarity=0.490 Sum_probs=184.2
Q ss_pred ccEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHHhcc
Q 000789 373 GEIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWIREK 452 (1283)
Q Consensus 373 ~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~ 452 (1283)
..|+++||+++|++ ..+|+||||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+ ...|++
T Consensus 6 ~~i~i~~l~k~~~~---~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~~G~v~i~G~~~~~~~-~~~~~~ 81 (306)
T PRK13537 6 APIDFRNVEKRYGD---KLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPDAGSISLCGEPVPSRA-RHARQR 81 (306)
T ss_pred ceEEEEeEEEEECC---eEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEecccch-HHHHhc
Confidence 35999999999963 46999999999999999999999999999999999999999999999999987654 356889
Q ss_pred cEEEccCCCCCc-ccHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHh
Q 000789 453 IGLVSQEPILFA-TSLRENIAYGKE--NATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARAIL 529 (1283)
Q Consensus 453 i~~v~Q~~~l~~-~ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARal~ 529 (1283)
||||||++.++. .|++||+.+... ..+..+..+. +.+.++.+ |+.........+||||||||++|||||+
T Consensus 82 ig~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~aL~ 154 (306)
T PRK13537 82 VGVVPQFDNLDPDFTVRENLLVFGRYFGLSAAAARAL-----VPPLLEFA--KLENKADAKVGELSGGMKRRLTLARALV 154 (306)
T ss_pred EEEEeccCcCCCCCcHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHc--CCchHhcCchhhCCHHHHHHHHHHHHHh
Confidence 999999999886 599999986322 1222222221 12334433 4444445555789999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC-CCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHHhcC
Q 000789 530 KNPKILLLDEATSALDAESERIVQDALVKIMT-SRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDELIKD 601 (1283)
Q Consensus 530 ~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~-~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~ 601 (1283)
.+|++|||||||++||+.+.+.+++.|+++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 155 ~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 228 (306)
T PRK13537 155 NDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFMEEAERLCDRLCVIEEGRKIAEGAPHALIES 228 (306)
T ss_pred CCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHhc
Confidence 99999999999999999999999999999854 6899999999999976 999999999999999999999754
No 338
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=5.9e-41 Score=374.08 Aligned_cols=204 Identities=33% Similarity=0.481 Sum_probs=178.7
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHhcce
Q 000789 1039 AIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQM 1118 (1283)
Q Consensus 1039 ~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i 1118 (1283)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++. .+|+.+
T Consensus 12 ~l~i~~l~~~~~~---~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~~G~i~~~g~~~~-----~~~~~i 83 (257)
T PRK11247 12 PLLLNAVSKRYGE---RTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPSAGELLAGTAPLA-----EAREDT 83 (257)
T ss_pred cEEEEEEEEEECC---cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEHH-----HhhCce
Confidence 5999999999974 35999999999999999999999999999999999999999999999998753 467899
Q ss_pred EEEccCCCCCh-hhHHHHHhcCCCCCCCHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHHHHHccC
Q 000789 1119 GLVSQEPVLFN-ETIRTNIAYGKQGGATEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKN 1197 (1283)
Q Consensus 1119 ~~V~Qdp~Lf~-gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiARAll~~ 1197 (1283)
+|++|++.+|. .|++||+.++.. ...++++.++++..++.++.. ....+||||||||++|||||+++
T Consensus 84 ~~v~q~~~l~~~~tv~enl~~~~~-~~~~~~~~~~l~~~gl~~~~~-----------~~~~~LSgGqkqrl~laraL~~~ 151 (257)
T PRK11247 84 RLMFQDARLLPWKKVIDNVGLGLK-GQWRDAALQALAAVGLADRAN-----------EWPAALSGGQKQRVALARALIHR 151 (257)
T ss_pred EEEecCccCCCCCcHHHHHHhccc-chHHHHHHHHHHHcCChhHhc-----------CChhhCCHHHHHHHHHHHHHhcC
Confidence 99999999987 699999987522 223556777777777765433 33458999999999999999999
Q ss_pred CCEEEEecccCCCCHHHHHHHHHHHHHHc--CCceEEEEecCchHHhh-cCEEEEEeCCEEEEecChH
Q 000789 1198 PKILLLDEATSALDAESERVVQDALERVM--VNRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHD 1262 (1283)
Q Consensus 1198 p~ILiLDEaTSaLD~~te~~I~~~L~~~~--~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~ 1262 (1283)
|++|||||||++||+.+...+.+.|+++. .++|+|+|||+++.+.. ||+|++|++|++++.|+.+
T Consensus 152 p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~~~~ 219 (257)
T PRK11247 152 PGLLLLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVSEAVAMADRVLLIEEGKIGLDLTVD 219 (257)
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecccc
Confidence 99999999999999999999999998864 37899999999999865 9999999999999988764
No 339
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.2e-41 Score=374.03 Aligned_cols=223 Identities=33% Similarity=0.539 Sum_probs=186.0
Q ss_pred ccEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCC-----CCceEEECCcccCC--CC
Q 000789 373 GEIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDP-----DAGEVLIDGIDIKK--LQ 445 (1283)
Q Consensus 373 ~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~~--~~ 445 (1283)
+.|+++||++.|++ .++++|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|+++.. .+
T Consensus 2 ~~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~ 78 (250)
T PRK14240 2 GKISVKDLDLFYGD---FQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDID 78 (250)
T ss_pred CeEEEEEEEEEECC---ceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccc
Confidence 46899999999963 3599999999999999999999999999999999999863 69999999999864 34
Q ss_pred HHHHhcccEEEccCCCCCcccHHHHHhcCCCC--C-C----HHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHH
Q 000789 446 LKWIREKIGLVSQEPILFATSLRENIAYGKEN--A-T----DQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQ 518 (1283)
Q Consensus 446 ~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~--~-~----~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGq 518 (1283)
...+|+.++|++|++.+|+.|++||+.++... . . ++++.++++.+++.+ ++.......+.+|||||
T Consensus 79 ~~~~~~~i~~~~q~~~~~~~t~~~ni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~l~~~~~~~~~~LS~G~ 151 (250)
T PRK14240 79 VNQLRKRVGMVFQQPNPFPMSIYDNVAYGPRTHGIKDKKKLDEIVEKSLKGAALWD-------EVKDRLKKSALGLSGGQ 151 (250)
T ss_pred hHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCch-------hhHHHHhcCCCCCCHHH
Confidence 55678899999999999999999999875321 1 1 122333333333222 22234566778999999
Q ss_pred HHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhH
Q 000789 519 KQRIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMTSRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDE 597 (1283)
Q Consensus 519 kqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~ 597 (1283)
|||++|||||+.+|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|++++
T Consensus 152 ~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~ 231 (250)
T PRK14240 152 QQRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELKKDYTIVIVTHNMQQASRISDKTAFFLNGEIVEFGDTVD 231 (250)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEEeCHHHHHhhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999998777899999999998865 99999999999999999999
Q ss_pred HhcCCCCh
Q 000789 598 LIKDPEGP 605 (1283)
Q Consensus 598 l~~~~~~~ 605 (1283)
+...+...
T Consensus 232 ~~~~~~~~ 239 (250)
T PRK14240 232 LFTNPKDK 239 (250)
T ss_pred HHhCCCCh
Confidence 87654333
No 340
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=3e-41 Score=368.23 Aligned_cols=202 Identities=37% Similarity=0.614 Sum_probs=172.7
Q ss_pred EEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHhcceEE
Q 000789 1041 ELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMGL 1120 (1283)
Q Consensus 1041 ~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~~ 1120 (1283)
+++||+++|++. ..++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++.+.+...+|++++|
T Consensus 1 ~~~~l~~~~~~~-~~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 79 (211)
T cd03225 1 ELKNLSFSYPDG-ARPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPTSGEVLVDGKDLTKLSLKELRRKVGL 79 (211)
T ss_pred CceeEEEecCCC-CeeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccCCHHHHHhhceE
Confidence 468999999742 2469999999999999999999999999999999999999999999999999988877888999999
Q ss_pred EccCC--CCChhhHHHHHhcCCC-CCCC----HHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHHHH
Q 000789 1121 VSQEP--VLFNETIRTNIAYGKQ-GGAT----EEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARA 1193 (1283)
Q Consensus 1121 V~Qdp--~Lf~gTIreNl~~g~~-~~~s----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiARA 1193 (1283)
+||++ .+++.|++||+.++.. ...+ ++++.+.++..++.+++. .....||||||||++||||
T Consensus 80 ~~q~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LSgG~~qrv~lara 148 (211)
T cd03225 80 VFQNPDDQFFGPTVEEEVAFGLENLGLPEEEIEERVEEALELVGLEGLRD-----------RSPFTLSGGQKQRVAIAGV 148 (211)
T ss_pred EecChhhhcCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCcHhhhc-----------CCcccCCHHHHHHHHHHHH
Confidence 99998 4678899999976421 1122 233455566666554433 3345899999999999999
Q ss_pred HccCCCEEEEecccCCCCHHHHHHHHHHHHHHcC-CceEEEEecCchHHhh-cCEEEEEeCCE
Q 000789 1194 VLKNPKILLLDEATSALDAESERVVQDALERVMV-NRTTVVVAHRLTTIKN-ADIIAVVKNGV 1254 (1283)
Q Consensus 1194 ll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~-~~TvI~IaHrl~ti~~-~D~I~vl~~G~ 1254 (1283)
|+++|++|||||||++||+++.+.+.+.|+++.+ ++|+|+|||+++.+.. ||+|++|++|+
T Consensus 149 l~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~G~ 211 (211)
T cd03225 149 LAMDPDILLLDEPTAGLDPAGRRELLELLKKLKAEGKTIIIVTHDLDLLLELADRVIVLEDGK 211 (211)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCC
Confidence 9999999999999999999999999999998753 7899999999999987 99999999985
No 341
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=5.9e-41 Score=375.83 Aligned_cols=222 Identities=33% Similarity=0.562 Sum_probs=187.4
Q ss_pred EEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCC---------
Q 000789 375 IELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQ--------- 445 (1283)
Q Consensus 375 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~--------- 445 (1283)
|+++||+++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++..++
T Consensus 1 i~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 77 (252)
T TIGR03005 1 VRFSDVTKRFGI---LTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPIDEGQIQVEGEQLYHMPGRNGPLVPA 77 (252)
T ss_pred CEEEEEEEEeCC---eeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccccccccccccc
Confidence 578999999963 36999999999999999999999999999999999999999999999999886543
Q ss_pred ----HHHHhcccEEEccCCCCCc-ccHHHHHhcCCC---CCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChH
Q 000789 446 ----LKWIREKIGLVSQEPILFA-TSLRENIAYGKE---NATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGG 517 (1283)
Q Consensus 446 ----~~~~r~~i~~v~Q~~~l~~-~ti~~ni~~~~~---~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgG 517 (1283)
...+++.++|++|++.+|. .|+.||+.++.. ....++.. ..+.+.++.+ |++......+.+||||
T Consensus 78 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~-----~~~~~~l~~~--gl~~~~~~~~~~LS~G 150 (252)
T TIGR03005 78 DEKHLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLVLGMARAEAE-----KRAMELLDMV--GLADKADHMPAQLSGG 150 (252)
T ss_pred chhHHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHc--CChhHhhcChhhcCHH
Confidence 2456789999999999886 699999987521 11222111 1233455555 6666667777899999
Q ss_pred HHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhc-cCEEEEEeCCEEeEecC
Q 000789 518 QKQRIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMT--SRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGT 594 (1283)
Q Consensus 518 qkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~ 594 (1283)
||||++|||||+++|++|||||||++||+.+...+.+.|+++.+ ++|+|+|||+++.+.. ||++++|++|++++.|+
T Consensus 151 ~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~ 230 (252)
T TIGR03005 151 QQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMGFAREFADRVCFFDKGRIVEQGK 230 (252)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999999999998754 6899999999999865 99999999999999999
Q ss_pred hhHHhcCCCChh
Q 000789 595 HDELIKDPEGPY 606 (1283)
Q Consensus 595 ~~~l~~~~~~~~ 606 (1283)
++++...+...|
T Consensus 231 ~~~~~~~~~~~~ 242 (252)
T TIGR03005 231 PDEIFRQPKEER 242 (252)
T ss_pred HHHHhcCCCcHH
Confidence 999976543333
No 342
>cd03250 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=7.8e-41 Score=362.62 Aligned_cols=200 Identities=35% Similarity=0.560 Sum_probs=180.7
Q ss_pred EEEEEEEEECCCCCC--CcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHHhcc
Q 000789 375 IELRDVYFRYPARPE--VQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWIREK 452 (1283)
Q Consensus 375 i~~~~v~f~y~~~~~--~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~ 452 (1283)
|+++||+++|++..+ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++| +
T Consensus 1 l~~~~l~~~~~~~~~~~~~il~~~s~~i~~G~~~~i~G~nG~GKSTLl~~i~G~~~~~~G~i~~~g-------------~ 67 (204)
T cd03250 1 ISVEDASFTWDSGEQETSFTLKDINLEVPKGELVAIVGPVGSGKSSLLSALLGELEKLSGSVSVPG-------------S 67 (204)
T ss_pred CEEeEEEEecCCCCccccceeeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCcCCCCCCeEEEcC-------------E
Confidence 478999999975311 3699999999999999999999999999999999999999999999998 6
Q ss_pred cEEEccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHhcCC
Q 000789 453 IGLVSQEPILFATSLRENIAYGKENATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARAILKNP 532 (1283)
Q Consensus 453 i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARal~~~~ 532 (1283)
|+|++|+|.+|+.|++||+.++.. ..+++..++++.+++.+++..+|.|+++.+++++.+||||||||++|||||+.+|
T Consensus 68 i~~~~q~~~l~~~t~~enl~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~lS~G~~qrv~laral~~~p 146 (204)
T cd03250 68 IAYVSQEPWIQNGTIRENILFGKP-FDEERYEKVIKACALEPDLEILPDGDLTEIGEKGINLSGGQKQRISLARAVYSDA 146 (204)
T ss_pred EEEEecCchhccCcHHHHhccCCC-cCHHHHHHHHHHcCcHHHHHhccCcccceecCCCCcCCHHHHHHHHHHHHHhcCC
Confidence 999999999999999999999743 3455677788888889999999999999999999999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHH-HHHHHc-CCCeEEEEecCchhhhccCEEEEEeCCE
Q 000789 533 KILLLDEATSALDAESERIVQD-ALVKIM-TSRTTVVVAHRLTTIRNADLIAVVHQGK 588 (1283)
Q Consensus 533 ~illlDE~ts~lD~~~~~~i~~-~l~~~~-~~~t~i~itH~l~~~~~~d~i~vl~~G~ 588 (1283)
+++||||||++||+++.+.+.+ .+.+.. +++|+|++||+++.+..||++++|++|+
T Consensus 147 ~llllDEP~~~LD~~~~~~l~~~ll~~~~~~~~tvi~~sh~~~~~~~~d~i~~l~~G~ 204 (204)
T cd03250 147 DIYLLDDPLSAVDAHVGRHIFENCILGLLLNNKTRILVTHQLQLLPHADQIVVLDNGR 204 (204)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHHHhccCCCEEEEEeCCHHHHhhCCEEEEEeCCC
Confidence 9999999999999999988887 455553 4689999999999998899999999985
No 343
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.7e-41 Score=387.21 Aligned_cols=229 Identities=26% Similarity=0.435 Sum_probs=185.4
Q ss_pred EEEEEEEEECCCCCC-CcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCC----CCCceEEECCcccCCCCHHHH
Q 000789 375 IELRDVYFRYPARPE-VQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYD----PDAGEVLIDGIDIKKLQLKWI 449 (1283)
Q Consensus 375 i~~~~v~f~y~~~~~-~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~----~~~G~i~~~g~~~~~~~~~~~ 449 (1283)
|+++|++++|+.... ..+|+||||+|++||++||||+||||||||+++|+|+++ |++|+|.++|+++.+++.+.+
T Consensus 4 L~v~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~~ 83 (326)
T PRK11022 4 LNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKER 83 (326)
T ss_pred EEEeCeEEEECCCCccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHHH
Confidence 799999999974321 359999999999999999999999999999999999998 489999999999988877654
Q ss_pred h----cccEEEccCCC--CCc-ccHHHHHhcCC---CCCCHHHHHHHHHHhcHHHHHHhCCCCcc---ccccCCCCCCCh
Q 000789 450 R----EKIGLVSQEPI--LFA-TSLRENIAYGK---ENATDQEIRTAIELANAAKFIDKLPKGLD---TMAGEHGTQLSG 516 (1283)
Q Consensus 450 r----~~i~~v~Q~~~--l~~-~ti~~ni~~~~---~~~~~~~~~~~~~~~~~~~~i~~lp~g~~---t~~~~~g~~LSg 516 (1283)
+ +.|+||+|+|. +++ -|+.+++.... .....++.. ..+.+.++.+ |++ ...+..+.+|||
T Consensus 84 ~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~~~~~~~~~~-----~~~~~~L~~~--gL~~~~~~l~~~p~~LSg 156 (326)
T PRK11022 84 RNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKKTRR-----QRAIDLLNQV--GIPDPASRLDVYPHQLSG 156 (326)
T ss_pred HHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHC--CCCChHHHHhCCchhCCH
Confidence 4 36999999985 443 26665554211 011221111 1122344444 453 345677889999
Q ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhc-cCEEEEEeCCEEeEec
Q 000789 517 GQKQRIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMT--SRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKG 593 (1283)
Q Consensus 517 GqkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g 593 (1283)
|||||++|||||+.+|++||+||||++||+.++..+.+.|+++.+ +.|+|+|||+++.+.. ||+|+||++|+|+|.|
T Consensus 157 Gq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~~~~~~adri~vm~~G~ive~g 236 (326)
T PRK11022 157 GMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETG 236 (326)
T ss_pred HHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEC
Confidence 999999999999999999999999999999999999999999854 6899999999999865 9999999999999999
Q ss_pred ChhHHhcCCCChhHHHH
Q 000789 594 THDELIKDPEGPYTQLV 610 (1283)
Q Consensus 594 ~~~~l~~~~~~~~~~~~ 610 (1283)
+++++++++...|.+..
T Consensus 237 ~~~~~~~~p~hpyt~~l 253 (326)
T PRK11022 237 KAHDIFRAPRHPYTQAL 253 (326)
T ss_pred CHHHHhhCCCChHHHHH
Confidence 99999988777776543
No 344
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=7e-41 Score=346.34 Aligned_cols=220 Identities=30% Similarity=0.470 Sum_probs=192.8
Q ss_pred cEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHH-Hhcc
Q 000789 374 EIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKW-IREK 452 (1283)
Q Consensus 374 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~-~r~~ 452 (1283)
-++++||+..|+. .++|+||||++++||+++|+||||+||||+++.|+|+.+|.+|+|.++|+|+...+++. .|..
T Consensus 3 mL~v~~l~~~YG~---~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~~G~I~~~G~dit~~p~~~r~r~G 79 (237)
T COG0410 3 MLEVENLSAGYGK---IQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPRSGRIIFDGEDITGLPPHERARLG 79 (237)
T ss_pred ceeEEeEeecccc---eeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeeEEECCeecCCCCHHHHHhCC
Confidence 4789999999974 46999999999999999999999999999999999999999999999999999998765 5778
Q ss_pred cEEEccCCCCCcc-cHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHhcC
Q 000789 453 IGLVSQEPILFAT-SLRENIAYGKENATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARAILKN 531 (1283)
Q Consensus 453 i~~v~Q~~~l~~~-ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARal~~~ 531 (1283)
|+||||.-.+|+. ||+||+.+|.....+++ ......++..+-+| -+......++.+|||||+|-+||||||+.+
T Consensus 80 i~~VPegR~iF~~LTVeENL~~g~~~~~~~~----~~~~~~e~v~~lFP-~Lker~~~~aG~LSGGEQQMLAiaRALm~~ 154 (237)
T COG0410 80 IAYVPEGRRIFPRLTVEENLLLGAYARRDKE----AQERDLEEVYELFP-RLKERRNQRAGTLSGGEQQMLAIARALMSR 154 (237)
T ss_pred eEeCcccccchhhCcHHHHHhhhhhcccccc----cccccHHHHHHHCh-hHHHHhcCcccCCChHHHHHHHHHHHHhcC
Confidence 9999999999976 99999998743222211 11111344556667 477778889999999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHHhcC
Q 000789 532 PKILLLDEATSALDAESERIVQDALVKIMT--SRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDELIKD 601 (1283)
Q Consensus 532 ~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~ 601 (1283)
|++|+|||||.+|-|.-.+.|.+.|+++.+ +.|+++|-++...... |||.+||++|+|+.+|+.+||.++
T Consensus 155 PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~~Al~iaDr~yvle~Griv~~G~~~eL~~~ 227 (237)
T COG0410 155 PKLLLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNARFALEIADRGYVLENGRIVLSGTAAELLAD 227 (237)
T ss_pred CCEEEecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHHHHHHhhCEEEEEeCCEEEEecCHHHHhcC
Confidence 999999999999999999999999999975 4599999999998765 999999999999999999999876
No 345
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.2e-41 Score=380.55 Aligned_cols=219 Identities=27% Similarity=0.469 Sum_probs=182.4
Q ss_pred cEEEEEEEEECCCCC--CcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCC----ChH
Q 000789 1039 AIELRCVSFKYPTRP--DVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKF----KLS 1112 (1283)
Q Consensus 1039 ~I~~~nVsf~Y~~~~--~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~----~~~ 1112 (1283)
.|+++||+++|++.. ..++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++... +..
T Consensus 2 ~i~~~~l~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13641 2 SIKFENVDYIYSPGTPMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPSSGTITIAGYHITPETGNKNLK 81 (287)
T ss_pred EEEEEEEEEEcCCCCCccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 378999999997321 13699999999999999999999999999999999999999999999999998653 245
Q ss_pred HHhcceEEEccCC--CCChhhHHHHHhcCCC-CCCCHHH----HHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHH
Q 000789 1113 WLRQQMGLVSQEP--VLFNETIRTNIAYGKQ-GGATEEE----IIAATEASNAHNFISALPHGYETNVGERGVQLSGGQK 1185 (1283)
Q Consensus 1113 ~lR~~i~~V~Qdp--~Lf~gTIreNl~~g~~-~~~sd~e----i~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQr 1185 (1283)
.+|+.++|+||+| .+|..|++||+.++.. ...+.++ +.++++..++.. .........||||||
T Consensus 82 ~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~----------~~~~~~~~~LSgGq~ 151 (287)
T PRK13641 82 KLRKKVSLVFQFPEAQLFENTVLKDVEFGPKNFGFSEDEAKEKALKWLKKVGLSE----------DLISKSPFELSGGQM 151 (287)
T ss_pred HHHhceEEEEeChhhhhccchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCh----------hHhhCCcccCCHHHH
Confidence 6788999999998 5888899999986421 1223222 344444444421 122344568999999
Q ss_pred HHHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHH
Q 000789 1186 QRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVM-VNRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDA 1263 (1283)
Q Consensus 1186 QRlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~e 1263 (1283)
||++|||||+.+|++|||||||++||+.+...+.+.|+++. ++.|+|++||+++.+.. ||+|++|++|++++.|++++
T Consensus 152 qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~ 231 (287)
T PRK13641 152 RRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMDDVAEYADDVLVLEHGKLIKHASPKE 231 (287)
T ss_pred HHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999875 47899999999999865 99999999999999999999
Q ss_pred HHhc
Q 000789 1264 LMKI 1267 (1283)
Q Consensus 1264 Ll~~ 1267 (1283)
+.+.
T Consensus 232 ~~~~ 235 (287)
T PRK13641 232 IFSD 235 (287)
T ss_pred HhcC
Confidence 8753
No 346
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=6e-41 Score=384.65 Aligned_cols=214 Identities=28% Similarity=0.457 Sum_probs=181.5
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHhcce
Q 000789 1039 AIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQM 1118 (1283)
Q Consensus 1039 ~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i 1118 (1283)
.|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++... ...+|+++
T Consensus 4 ~i~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~-~~~~~~~i 79 (303)
T TIGR01288 4 AIDLVGVSKSYGD---KVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITVLGEPVPSR-ARLARVAI 79 (303)
T ss_pred EEEEEeEEEEeCC---eEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccc-HHHHhhcE
Confidence 4899999999974 3599999999999999999999999999999999999999999999999998654 35678999
Q ss_pred EEEccCCCCCh-hhHHHHHhc-CCCCCCCHHH----HHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHHH
Q 000789 1119 GLVSQEPVLFN-ETIRTNIAY-GKQGGATEEE----IIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIAR 1192 (1283)
Q Consensus 1119 ~~V~Qdp~Lf~-gTIreNl~~-g~~~~~sd~e----i~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiAR 1192 (1283)
+||||++.+|. .|++||+.+ +.....+..+ +.++++..++. +.+++.+ ..||||||||++|||
T Consensus 80 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~l~-------~~~~~~~----~~LSgG~~qrv~la~ 148 (303)
T TIGR01288 80 GVVPQFDNLDPEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARLE-------SKADVRV----ALLSGGMKRRLTLAR 148 (303)
T ss_pred EEEeccccCCcCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCh-------hHhcCch----hhCCHHHHHHHHHHH
Confidence 99999998884 699999974 2111233333 33344444433 2334444 479999999999999
Q ss_pred HHccCCCEEEEecccCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHHHhc
Q 000789 1193 AVLKNPKILLLDEATSALDAESERVVQDALERVM-VNRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDALMKI 1267 (1283)
Q Consensus 1193 All~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl~~ 1267 (1283)
||+++|++|||||||++||+.+...+.+.|+++. +++|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 149 al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 225 (303)
T TIGR01288 149 ALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLESGRKIAEGRPHALIDE 225 (303)
T ss_pred HHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhh
Confidence 9999999999999999999999999999999874 47899999999999976 999999999999999999999764
No 347
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.8e-41 Score=382.20 Aligned_cols=220 Identities=30% Similarity=0.495 Sum_probs=182.2
Q ss_pred ccEEEEEEEEECCCCC--CcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCC----C-C
Q 000789 1038 GAIELRCVSFKYPTRP--DVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPK----F-K 1110 (1283)
Q Consensus 1038 g~I~~~nVsf~Y~~~~--~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~----~-~ 1110 (1283)
+.|+++||+++|++++ ..++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++.. . +
T Consensus 5 ~~l~i~nl~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~ 84 (289)
T PRK13645 5 KDIILDNVSYTYAKKTPFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISETGQTIVGDYAIPANLKKIKE 84 (289)
T ss_pred ceEEEEEEEEEeCCCCccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccccccccc
Confidence 5799999999997532 1359999999999999999999999999999999999999999999999998852 2 3
Q ss_pred hHHHhcceEEEccCC--CCChhhHHHHHhcCCC-CCCCHHHH----HHHHHHhChHHHHHhCCCCcccccCCCCCCCChh
Q 000789 1111 LSWLRQQMGLVSQEP--VLFNETIRTNIAYGKQ-GGATEEEI----IAATEASNAHNFISALPHGYETNVGERGVQLSGG 1183 (1283)
Q Consensus 1111 ~~~lR~~i~~V~Qdp--~Lf~gTIreNl~~g~~-~~~sd~ei----~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgG 1183 (1283)
...+|+.|+||||+| .+|..|++||+.++.. ...+.++. .+.++..++ |.+ .......+||||
T Consensus 85 ~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~ll~~~~L-------~~~---~~~~~~~~LS~G 154 (289)
T PRK13645 85 VKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNLGENKQEAYKKVPELLKLVQL-------PED---YVKRSPFELSGG 154 (289)
T ss_pred HHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCC-------Chh---HhcCChhhCCHH
Confidence 567888999999998 4788899999987521 12233332 223333322 211 233445689999
Q ss_pred HHHHHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchHHhh-cCEEEEEeCCEEEEecC
Q 000789 1184 QKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMV--NRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGS 1260 (1283)
Q Consensus 1184 QrQRlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt 1260 (1283)
||||++|||||+++|++|||||||++||+.+.+.+.+.|+++.+ ++|+|+|||+++.+.. ||+|++|++|++++.|+
T Consensus 155 q~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~g~ 234 (289)
T PRK13645 155 QKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMDQVLRIADEVIVMHEGKVISIGS 234 (289)
T ss_pred HHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999999999998753 7899999999998765 99999999999999999
Q ss_pred hHHHHhc
Q 000789 1261 HDALMKI 1267 (1283)
Q Consensus 1261 ~~eLl~~ 1267 (1283)
++++.+.
T Consensus 235 ~~~~~~~ 241 (289)
T PRK13645 235 PFEIFSN 241 (289)
T ss_pred HHHHhcC
Confidence 9988653
No 348
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=1.4e-40 Score=372.74 Aligned_cols=219 Identities=34% Similarity=0.572 Sum_probs=186.4
Q ss_pred cEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCC--------
Q 000789 374 EIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQ-------- 445 (1283)
Q Consensus 374 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~-------- 445 (1283)
.++++||+++|++ .++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|+++...+
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (250)
T PRK11264 3 AIEVKNLVKKFHG---QTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPEAGTIRVGDITIDTARSLSQQKGL 79 (250)
T ss_pred cEEEeceEEEECC---eeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccccccchhhH
Confidence 3889999999963 35999999999999999999999999999999999999999999999999986532
Q ss_pred HHHHhcccEEEccCCCCCc-ccHHHHHhcCCC---CCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHH
Q 000789 446 LKWIREKIGLVSQEPILFA-TSLRENIAYGKE---NATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQR 521 (1283)
Q Consensus 446 ~~~~r~~i~~v~Q~~~l~~-~ti~~ni~~~~~---~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqr 521 (1283)
...+++.++||+|++.+|+ .|++||+.++.. ....++..+ .+.+.++.+ |++......+.+||||||||
T Consensus 80 ~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~LS~Gq~qr 152 (250)
T PRK11264 80 IRQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVKGEPKEEATA-----RARELLAKV--GLAGKETSYPRRLSGGQQQR 152 (250)
T ss_pred HHHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CCcchhhCChhhCChHHHHH
Confidence 3456789999999999886 599999987421 112222111 123455555 67666677888999999999
Q ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC-CCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHHh
Q 000789 522 IAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMT-SRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDELI 599 (1283)
Q Consensus 522 iaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~-~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~ 599 (1283)
++|||||+.+|++|||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 153 v~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 232 (250)
T PRK11264 153 VAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFMDQGRIVEQGPAKALF 232 (250)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHh
Confidence 9999999999999999999999999999999999998764 7899999999999876 9999999999999999999987
Q ss_pred cCC
Q 000789 600 KDP 602 (1283)
Q Consensus 600 ~~~ 602 (1283)
+.+
T Consensus 233 ~~~ 235 (250)
T PRK11264 233 ADP 235 (250)
T ss_pred cCC
Confidence 653
No 349
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.5e-41 Score=377.69 Aligned_cols=214 Identities=27% Similarity=0.412 Sum_probs=187.8
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHhcce
Q 000789 1039 AIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQM 1118 (1283)
Q Consensus 1039 ~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i 1118 (1283)
.|+++||+++|++ ..+|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.+||.++...+...+++.+
T Consensus 7 ~l~i~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 83 (265)
T PRK10253 7 RLRGEQLTLGYGK---YTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPAHGHVWLDGEHIQHYASKEVARRI 83 (265)
T ss_pred EEEEEEEEEEECC---EEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEEhhhCCHHHHhhhe
Confidence 6999999999974 3599999999999999999999999999999999999999999999999999888888888899
Q ss_pred EEEccCCCCC-hhhHHHHHhcCCCC---------CCCHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHH
Q 000789 1119 GLVSQEPVLF-NETIRTNIAYGKQG---------GATEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRI 1188 (1283)
Q Consensus 1119 ~~V~Qdp~Lf-~gTIreNl~~g~~~---------~~sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRl 1188 (1283)
+|+||++.+| ..|++||+.++... +..++++.++++..++.++..+ ....||||||||+
T Consensus 84 ~~v~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~Gq~qrv 152 (265)
T PRK10253 84 GLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQATGITHLADQ-----------SVDTLSGGQRQRA 152 (265)
T ss_pred EEeeccCcCCCCCcHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcC-----------CcccCChHHHHHH
Confidence 9999999887 46999999865211 0112356677777777655332 3458999999999
Q ss_pred HHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHHH
Q 000789 1189 AIARAVLKNPKILLLDEATSALDAESERVVQDALERVMV--NRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDALM 1265 (1283)
Q Consensus 1189 aiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl 1265 (1283)
+||||++++|++|||||||++||+++...+.+.|+++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 153 ~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 232 (265)
T PRK10253 153 WIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLNQACRYASHLIALREGKIVAQGAPKEIV 232 (265)
T ss_pred HHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999999998753 7899999999998866 9999999999999999999987
Q ss_pred h
Q 000789 1266 K 1266 (1283)
Q Consensus 1266 ~ 1266 (1283)
.
T Consensus 233 ~ 233 (265)
T PRK10253 233 T 233 (265)
T ss_pred h
Confidence 5
No 350
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.7e-41 Score=378.39 Aligned_cols=214 Identities=29% Similarity=0.438 Sum_probs=182.4
Q ss_pred EEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCC--CCChHHHhcc
Q 000789 1040 IELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELP--KFKLSWLRQQ 1117 (1283)
Q Consensus 1040 I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~--~~~~~~lR~~ 1117 (1283)
|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++. +.+...+|++
T Consensus 2 l~~~~l~~~~~~---~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~ 78 (271)
T PRK13638 2 LATSDLWFRYQD---EPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQKGAVLWQGKPLDYSKRGLLALRQQ 78 (271)
T ss_pred eEEEEEEEEcCC---cccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCccEEEECCEEcccccCCHHHHHhh
Confidence 789999999974 35999999999999999999999999999999999999999999999999985 3345677889
Q ss_pred eEEEccCCC--CChhhHHHHHhcCCC-CCCCH----HHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHH
Q 000789 1118 MGLVSQEPV--LFNETIRTNIAYGKQ-GGATE----EEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAI 1190 (1283)
Q Consensus 1118 i~~V~Qdp~--Lf~gTIreNl~~g~~-~~~sd----~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlai 1190 (1283)
++||||+|. +|..|+.+|+.++.. ...+. +++.++++..++.++.. ....+||||||||++|
T Consensus 79 i~~v~q~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LSgG~~qrl~l 147 (271)
T PRK13638 79 VATVFQDPEQQIFYTDIDSDIAFSLRNLGVPEAEITRRVDEALTLVDAQHFRH-----------QPIQCLSHGQKKRVAI 147 (271)
T ss_pred eEEEeeChhhccccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHhHhc-----------CCchhCCHHHHHHHHH
Confidence 999999985 677899999976311 11232 23455666666654432 2345899999999999
Q ss_pred HHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHHHhc
Q 000789 1191 ARAVLKNPKILLLDEATSALDAESERVVQDALERVM-VNRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDALMKI 1267 (1283)
Q Consensus 1191 ARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl~~ 1267 (1283)
||||+.+|+||||||||++||+.+...+.+.|+++. +++|+|+|||+++.+.. ||++++|++|++++.|+++++...
T Consensus 148 araL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 226 (271)
T PRK13638 148 AGALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDIDLIYEISDAVYVLRQGQILTHGAPGEVFAC 226 (271)
T ss_pred HHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 999999999999999999999999999999999875 47899999999999865 999999999999999999998764
No 351
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.3e-41 Score=368.45 Aligned_cols=213 Identities=27% Similarity=0.477 Sum_probs=177.3
Q ss_pred EEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHHhcccE
Q 000789 375 IELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWIREKIG 454 (1283)
Q Consensus 375 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 454 (1283)
|+++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++... ...++++++
T Consensus 1 i~~~~~~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~-~~~~~~~i~ 76 (220)
T cd03265 1 IEVENLVKKYGD---FEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPTSGRATVAGHDVVRE-PREVRRRIG 76 (220)
T ss_pred CEEEEEEEEECC---EEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecCcC-hHHHhhcEE
Confidence 578999999963 3699999999999999999999999999999999999999999999999988653 355678899
Q ss_pred EEccCCCCCcc-cHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHhcC
Q 000789 455 LVSQEPILFAT-SLRENIAYGKE--NATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARAILKN 531 (1283)
Q Consensus 455 ~v~Q~~~l~~~-ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARal~~~ 531 (1283)
|++|++.+++. |++||+.++.. ....++..+ .+.+.++.+ |++........+||||||||++||||++.+
T Consensus 77 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qr~~la~al~~~ 149 (220)
T cd03265 77 IVFQDLSVDDELTGWENLYIHARLYGVPGAERRE-----RIDELLDFV--GLLEAADRLVKTYSGGMRRRLEIARSLVHR 149 (220)
T ss_pred EecCCccccccCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CCHHHhhCChhhCCHHHHHHHHHHHHHhcC
Confidence 99999998875 99999987421 111111111 122333343 444444455678999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHH
Q 000789 532 PKILLLDEATSALDAESERIVQDALVKIMT--SRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDEL 598 (1283)
Q Consensus 532 ~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l 598 (1283)
|++|||||||++||+++.+.+.+.|.++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 150 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 219 (220)
T cd03265 150 PEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYMEEAEQLCDRVAIIDHGRIIAEGTPEEL 219 (220)
T ss_pred CCEEEEcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEeCChHHc
Confidence 999999999999999999999999998753 6899999999999876 999999999999999987764
No 352
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9e-41 Score=374.12 Aligned_cols=225 Identities=31% Similarity=0.512 Sum_probs=192.0
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCC-----CCcceEEECCccCCCC--Ch
Q 000789 1039 AIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYD-----PDSGHVLLDNIELPKF--KL 1111 (1283)
Q Consensus 1039 ~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~-----~~~G~I~idG~di~~~--~~ 1111 (1283)
.|+++||+++|++ .++|+|+||+|++||+++|+|+||||||||+++|+|+.+ |++|+|.+||.++... +.
T Consensus 3 ~l~~~~v~~~~~~---~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~ 79 (250)
T PRK14266 3 RIEVENLNTYFDD---AHILKNVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDGVDIYDPAVDV 79 (250)
T ss_pred EEEEEeEEEEeCC---eEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECCEEcccccccH
Confidence 3889999999973 359999999999999999999999999999999999875 3899999999998653 45
Q ss_pred HHHhcceEEEccCCCCChhhHHHHHhcCCC-CCC-C----HHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHH
Q 000789 1112 SWLRQQMGLVSQEPVLFNETIRTNIAYGKQ-GGA-T----EEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQK 1185 (1283)
Q Consensus 1112 ~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~-~~~-s----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQr 1185 (1283)
..+|++++|+||+|.+|+.|++||+.++.. .+. + ++++.++++.+++.+++..+ ....+.+||||||
T Consensus 80 ~~~~~~i~~~~q~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~-------~~~~~~~LS~Gq~ 152 (250)
T PRK14266 80 VELRKKVGMVFQKPNPFPKSIFDNVAYGLRIHGEDDEDFIEERVEESLKAAALWDEVKDK-------LDKSALGLSGGQQ 152 (250)
T ss_pred HHHhhheEEEecCCccCcchHHHHHHhHHhhcCCCCHHHHHHHHHHHHHHcCCchhHHHH-------HhCCcccCCHHHH
Confidence 678899999999999999999999986421 111 2 23456677888876665432 2344568999999
Q ss_pred HHHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcCCceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHH
Q 000789 1186 QRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDAL 1264 (1283)
Q Consensus 1186 QRlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eL 1264 (1283)
||++||||++++|+||||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 153 qrv~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~~~~i~~l~~G~i~~~g~~~~~ 232 (250)
T PRK14266 153 QRLCIARTIAVSPEVILMDEPCSALDPISTTKIEDLIHKLKEDYTIVIVTHNMQQATRVSKYTSFFLNGEIIESGLTDQI 232 (250)
T ss_pred HHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEECCHHHHHhhcCEEEEEECCeEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998778999999999998877 899999999999999999999
Q ss_pred HhccCchhH
Q 000789 1265 MKITDGAYA 1273 (1283)
Q Consensus 1265 l~~~~g~y~ 1273 (1283)
...+.+.+.
T Consensus 233 ~~~~~~~~~ 241 (250)
T PRK14266 233 FINPKDKRT 241 (250)
T ss_pred HhCCCChHH
Confidence 866555443
No 353
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.5e-41 Score=371.72 Aligned_cols=212 Identities=35% Similarity=0.508 Sum_probs=184.9
Q ss_pred EEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHhcceE
Q 000789 1040 IELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMG 1119 (1283)
Q Consensus 1040 I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~ 1119 (1283)
|+++|++++|+. .++++|+||+|+|||+++|+|+||||||||+++|+|+++|++|+|.+||+++.+.+. .++.++
T Consensus 1 l~~~~l~~~~~~---~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~~G~i~~~g~~~~~~~~--~~~~i~ 75 (232)
T cd03300 1 IELENVSKFYGG---FVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPTSGEILLDGKDITNLPP--HKRPVN 75 (232)
T ss_pred CEEEeEEEEeCC---eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCh--hhcceE
Confidence 578999999974 359999999999999999999999999999999999999999999999999987654 368899
Q ss_pred EEccCCCCChh-hHHHHHhcCCC-CCC----CHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHHHH
Q 000789 1120 LVSQEPVLFNE-TIRTNIAYGKQ-GGA----TEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARA 1193 (1283)
Q Consensus 1120 ~V~Qdp~Lf~g-TIreNl~~g~~-~~~----sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiARA 1193 (1283)
|+||++.+|.+ |++||+.++.. ... .++++.++++..++.+++...| .+||||||||++||||
T Consensus 76 ~~~q~~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~lS~G~~qrl~lara 144 (232)
T cd03300 76 TVFQNYALFPHLTVFENIAFGLRLKKLPKAEIKERVAEALDLVQLEGYANRKP-----------SQLSGGQQQRVAIARA 144 (232)
T ss_pred EEecccccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhcCCh-----------hhCCHHHHHHHHHHHH
Confidence 99999999965 99999975411 111 2345666777777766655444 4899999999999999
Q ss_pred HccCCCEEEEecccCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHHHhc
Q 000789 1194 VLKNPKILLLDEATSALDAESERVVQDALERVMV--NRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDALMKI 1267 (1283)
Q Consensus 1194 ll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl~~ 1267 (1283)
++++|++|||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 145 l~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sh~~~~~~~~~d~i~~l~~G~~~~~~~~~~~~~~ 221 (232)
T cd03300 145 LVNEPKVLLLDEPLGALDLKLRKDMQLELKRLQKELGITFVFVTHDQEEALTMSDRIAVMNKGKIQQIGTPEEIYEE 221 (232)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEecCCHHHHHhC
Confidence 9999999999999999999999999999998753 7899999999999866 999999999999999999999875
No 354
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.7e-41 Score=374.27 Aligned_cols=219 Identities=30% Similarity=0.446 Sum_probs=187.1
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCC-----CcceEEECCccCCCC--Ch
Q 000789 1039 AIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDP-----DSGHVLLDNIELPKF--KL 1111 (1283)
Q Consensus 1039 ~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~-----~~G~I~idG~di~~~--~~ 1111 (1283)
-|+++||+++|++ .++|+|+||+|++||.++|+|+||||||||+++|+|+++| ++|+|.+||.++... +.
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 80 (251)
T PRK14270 4 KMESKNLNLWYGE---KQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDV 80 (251)
T ss_pred EEEEEEeEEEECC---eeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccH
Confidence 4899999999973 3599999999999999999999999999999999999875 799999999998653 34
Q ss_pred HHHhcceEEEccCCCCChhhHHHHHhcCCC-CCC-C----HHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHH
Q 000789 1112 SWLRQQMGLVSQEPVLFNETIRTNIAYGKQ-GGA-T----EEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQK 1185 (1283)
Q Consensus 1112 ~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~-~~~-s----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQr 1185 (1283)
..+|+.++|+||++.+|+.|++||+.++.. ... + ++++.++++.+++.+.+.. ........||||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~G~~ 153 (251)
T PRK14270 81 VELRKRVGMVFQKPNPFPMSIYDNVAYGPRIHGIKDKKELDKIVEWALKKAALWDEVKD-------DLKKSALKLSGGQQ 153 (251)
T ss_pred HHHHhheEEEecCCCcCCCcHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCchhhhh-------HhhCCcccCCHHHH
Confidence 567889999999999999999999986421 111 1 2345566777766433322 23345568999999
Q ss_pred HHHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcCCceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHH
Q 000789 1186 QRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDAL 1264 (1283)
Q Consensus 1186 QRlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eL 1264 (1283)
||++||||++++|+||||||||++||+.+...+.+.|+++.++.|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 154 qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 233 (251)
T PRK14270 154 QRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKKEYTIVIVTHNMQQASRVSDYTAFFLMGDLIEFNKTEKI 233 (251)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEEcCHHHHHHhcCEEEEEECCeEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998777899999999999876 999999999999999999999
Q ss_pred Hhc
Q 000789 1265 MKI 1267 (1283)
Q Consensus 1265 l~~ 1267 (1283)
...
T Consensus 234 ~~~ 236 (251)
T PRK14270 234 FLE 236 (251)
T ss_pred hcC
Confidence 764
No 355
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-40 Score=377.01 Aligned_cols=220 Identities=25% Similarity=0.438 Sum_probs=187.3
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCC-----CcceEEECCccCCCCC-hH
Q 000789 1039 AIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDP-----DSGHVLLDNIELPKFK-LS 1112 (1283)
Q Consensus 1039 ~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~-----~~G~I~idG~di~~~~-~~ 1112 (1283)
.|+++||+++|++ .++|+|+||+|++||+++|+|+||||||||+++|.|+++| ++|+|.+||.++.+.+ ..
T Consensus 21 ~l~i~nl~~~~~~---~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~ 97 (276)
T PRK14271 21 AMAAVNLTLGFAG---KTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDVL 97 (276)
T ss_pred EEEEeeEEEEECC---EEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEccccchhH
Confidence 5899999999974 3699999999999999999999999999999999999986 6999999999987653 45
Q ss_pred HHhcceEEEccCCCCChhhHHHHHhcCCC--CCCCHHHHH----HHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHH
Q 000789 1113 WLRQQMGLVSQEPVLFNETIRTNIAYGKQ--GGATEEEII----AATEASNAHNFISALPHGYETNVGERGVQLSGGQKQ 1186 (1283)
Q Consensus 1113 ~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~--~~~sd~ei~----~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQ 1186 (1283)
.+|++++|+||+|.+|+.|++||+.++.. ...+++++. +.++..++.+. +++.+.....+|||||||
T Consensus 98 ~~~~~i~~v~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~~l~~~~~~LSgGq~q 170 (276)
T PRK14271 98 EFRRRVGMLFQRPNPFPMSIMDNVLAGVRAHKLVPRKEFRGVAQARLTEVGLWDA-------VKDRLSDSPFRLSGGQQQ 170 (276)
T ss_pred HHhhheEEeccCCccCCccHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCCch-------hhhHhhCCcccCCHHHHH
Confidence 67899999999999999999999986521 123444433 33344443322 223345566789999999
Q ss_pred HHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcCCceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHHH
Q 000789 1187 RIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDALM 1265 (1283)
Q Consensus 1187 RlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl 1265 (1283)
|++|||||+++|+||||||||++||+.+.+.+.+.|+++.+++|+|+|||+++.+.. ||++++|++|++++.|+++++.
T Consensus 171 rl~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~ 250 (276)
T PRK14271 171 LLCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLADRLTVIIVTHNLAQAARISDRAALFFDGRLVEEGPTEQLF 250 (276)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999988767899999999999876 9999999999999999999998
Q ss_pred hcc
Q 000789 1266 KIT 1268 (1283)
Q Consensus 1266 ~~~ 1268 (1283)
+.+
T Consensus 251 ~~~ 253 (276)
T PRK14271 251 SSP 253 (276)
T ss_pred hCc
Confidence 753
No 356
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.9e-41 Score=377.91 Aligned_cols=220 Identities=28% Similarity=0.475 Sum_probs=183.7
Q ss_pred cEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCC-----CCCceEEECCcccCC--CCH
Q 000789 374 EIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYD-----PDAGEVLIDGIDIKK--LQL 446 (1283)
Q Consensus 374 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~~~g~~~~~--~~~ 446 (1283)
.|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|+++.. .+.
T Consensus 21 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 97 (268)
T PRK14248 21 ILEVKDLSIYYGE---KRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILDSNINV 97 (268)
T ss_pred eEEEEEEEEEeCC---ceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEcccccccH
Confidence 5999999999963 369999999999999999999999999999999999864 799999999999864 334
Q ss_pred HHHhcccEEEccCCCCCcccHHHHHhcCCCCC---CH----HHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHH
Q 000789 447 KWIREKIGLVSQEPILFATSLRENIAYGKENA---TD----QEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQK 519 (1283)
Q Consensus 447 ~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~---~~----~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqk 519 (1283)
..++++++|++|++.+|+.|++||+.++.... .. +.+.++++..++.+ ++....+..+.+||||||
T Consensus 98 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~~~~~~~~~~~~LSgGq~ 170 (268)
T PRK14248 98 VNLRREIGMVFQKPNPFPKSIYNNITHALKYAGERRKSVLDEIVEESLTKAALWD-------EVKDRLHSSALSLSGGQQ 170 (268)
T ss_pred HHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCCc-------chHHHHhcCcccCCHHHH
Confidence 56788999999999999999999998753211 11 11222332222211 112345667789999999
Q ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHH
Q 000789 520 QRIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMTSRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDEL 598 (1283)
Q Consensus 520 qriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l 598 (1283)
||++|||||+.+|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 171 qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 250 (268)
T PRK14248 171 QRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKEEYSIIIVTHNMQQALRVSDRTAFFLNGDLVEYDQTEQI 250 (268)
T ss_pred HHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhcCCEEEEEEeCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998767899999999998865 999999999999999999998
Q ss_pred hcCCC
Q 000789 599 IKDPE 603 (1283)
Q Consensus 599 ~~~~~ 603 (1283)
..++.
T Consensus 251 ~~~~~ 255 (268)
T PRK14248 251 FTSPK 255 (268)
T ss_pred HhCCC
Confidence 76543
No 357
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.7e-41 Score=373.99 Aligned_cols=222 Identities=27% Similarity=0.471 Sum_probs=188.6
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCC-----CcceEEECCccCC-CCChH
Q 000789 1039 AIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDP-----DSGHVLLDNIELP-KFKLS 1112 (1283)
Q Consensus 1039 ~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~-----~~G~I~idG~di~-~~~~~ 1112 (1283)
.|+++||+++|++ .++|+|+||+|++||.++|+|+||||||||+++|+|+++| ++|+|.+||.++. ..+..
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~ 79 (249)
T PRK14253 3 KFNIENLDLFYGE---NQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNIDVA 79 (249)
T ss_pred eEEEeccEEEECC---eeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEcccccchH
Confidence 4899999999974 3599999999999999999999999999999999999986 5999999999985 45566
Q ss_pred HHhcceEEEccCCCCChhhHHHHHhcCCC-CCC-C----HHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHH
Q 000789 1113 WLRQQMGLVSQEPVLFNETIRTNIAYGKQ-GGA-T----EEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQ 1186 (1283)
Q Consensus 1113 ~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~-~~~-s----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQ 1186 (1283)
.+|+.++|+||++.+|..|++||+.++.. ... + ++++.++++.+++.+.+. .........|||||||
T Consensus 80 ~~~~~i~~~~q~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-------~~~~~~~~~LS~G~~q 152 (249)
T PRK14253 80 DLRIKVGMVFQKPNPFPMSIYENVAYGLRAQGIKDKKVLDEVVERSLRGAALWDEVK-------DRLKSHAFGLSGGQQQ 152 (249)
T ss_pred HHHhheeEEecCCCcCcccHHHHHHhHHHhcCCCchHHHHHHHHHHHHHcCCchhhh-------HHhhcCcccCCHHHHH
Confidence 78899999999999999999999986521 111 1 233455666666654332 2234445689999999
Q ss_pred HHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcCCceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHHH
Q 000789 1187 RIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDALM 1265 (1283)
Q Consensus 1187 RlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl 1265 (1283)
|++||||++.+|+||||||||++||+.+...+.+.|+++.+++|+|+|||+++.+.. ||++++|++|++++.|+++++.
T Consensus 153 rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 232 (249)
T PRK14253 153 RLCIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKKNYTIVIVTHSMQQARRISDRTAFFLMGELVEHDDTQVIF 232 (249)
T ss_pred HHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999998777899999999999877 9999999999999999999987
Q ss_pred hccCc
Q 000789 1266 KITDG 1270 (1283)
Q Consensus 1266 ~~~~g 1270 (1283)
..+..
T Consensus 233 ~~~~~ 237 (249)
T PRK14253 233 SNPKD 237 (249)
T ss_pred cCCCC
Confidence 64333
No 358
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=4.8e-41 Score=367.59 Aligned_cols=203 Identities=31% Similarity=0.497 Sum_probs=174.0
Q ss_pred EEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCCh---HHHhc
Q 000789 1040 IELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKL---SWLRQ 1116 (1283)
Q Consensus 1040 I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~---~~lR~ 1116 (1283)
|+++||+++|+++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+. ..+|+
T Consensus 1 l~~~~l~~~~~~~--~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 78 (214)
T cd03292 1 IEFINVTKTYPNG--TAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPTSGTIRVNGQDVSDLRGRAIPYLRR 78 (214)
T ss_pred CEEEEEEEEeCCC--ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcccCCHHHHHHHHH
Confidence 4789999999743 359999999999999999999999999999999999999999999999999987654 34788
Q ss_pred ceEEEccCCCCCh-hhHHHHHhcCCC-CCCC----HHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHH
Q 000789 1117 QMGLVSQEPVLFN-ETIRTNIAYGKQ-GGAT----EEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAI 1190 (1283)
Q Consensus 1117 ~i~~V~Qdp~Lf~-gTIreNl~~g~~-~~~s----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlai 1190 (1283)
.++||||+|.+|. .|++||+.++.. ...+ ++++.++++..++.+..... ..+||||||||++|
T Consensus 79 ~i~~v~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrv~l 147 (214)
T cd03292 79 KIGVVFQDFRLLPDRNVYENVAFALEVTGVPPREIRKRVPAALELVGLSHKHRAL-----------PAELSGGEQQRVAI 147 (214)
T ss_pred heEEEecCchhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhCC-----------hhhcCHHHHHHHHH
Confidence 9999999999887 599999986421 1122 23456677777766554433 24799999999999
Q ss_pred HHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchHHhh-cCEEEEEeCCEE
Q 000789 1191 ARAVLKNPKILLLDEATSALDAESERVVQDALERVM-VNRTTVVVAHRLTTIKN-ADIIAVVKNGVI 1255 (1283)
Q Consensus 1191 ARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHrl~ti~~-~D~I~vl~~G~I 1255 (1283)
|||++++|++|||||||++||+++.+.+.+.|+++. +++|+|+|||+++.+.. ||+|++|++|++
T Consensus 148 aral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~~ 214 (214)
T cd03292 148 ARAIVNSPTILIADEPTGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKELVDTTRHRVIALERGKL 214 (214)
T ss_pred HHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 999999999999999999999999999999999874 47899999999999986 999999999974
No 359
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.5e-41 Score=371.63 Aligned_cols=218 Identities=26% Similarity=0.406 Sum_probs=182.6
Q ss_pred cEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHH-Hhcc
Q 000789 374 EIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKW-IREK 452 (1283)
Q Consensus 374 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~-~r~~ 452 (1283)
.|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+... .++.
T Consensus 5 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 81 (237)
T PRK11614 5 MLSFDKVSAHYGK---IQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIVFDGKDITDWQTAKIMREA 81 (237)
T ss_pred EEEEEeEEEeeCC---ceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEecCCCCHHHHHHhC
Confidence 4899999999963 36999999999999999999999999999999999999999999999999998877543 6778
Q ss_pred cEEEccCCCCCcc-cHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHhcC
Q 000789 453 IGLVSQEPILFAT-SLRENIAYGKENATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARAILKN 531 (1283)
Q Consensus 453 i~~v~Q~~~l~~~-ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARal~~~ 531 (1283)
++|++|++.+|+. |++||+.++......++..+. +.+.++.++ +++.........||||||||++|||||+.+
T Consensus 82 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~-----~~~~l~~~~-~l~~~~~~~~~~LS~G~~qrl~la~al~~~ 155 (237)
T PRK11614 82 VAIVPEGRRVFSRMTVEENLAMGGFFAERDQFQER-----IKWVYELFP-RLHERRIQRAGTMSGGEQQMLAIGRALMSQ 155 (237)
T ss_pred EEEeccCcccCCCCcHHHHHHHhhhccChhHHHHH-----HHHHHHHHH-HHHHHHhCchhhCCHHHHHHHHHHHHHHhC
Confidence 9999999999985 999999986432222222211 112222221 122233456678999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHHhc
Q 000789 532 PKILLLDEATSALDAESERIVQDALVKIM-TSRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDELIK 600 (1283)
Q Consensus 532 ~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~ 600 (1283)
|+||||||||++||+.+.+.+.+.|+++. +++|+|++||+++.+.. ||++++|++|++++.|+++++..
T Consensus 156 p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 226 (237)
T PRK11614 156 PRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNANQALKLADRGYVLENGHVVLEDTGDALLA 226 (237)
T ss_pred CCEEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHhhCCEEEEEeCCEEEeeCCHHHHhc
Confidence 99999999999999999999999999875 47899999999998765 99999999999999999999864
No 360
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.5e-41 Score=377.59 Aligned_cols=220 Identities=32% Similarity=0.510 Sum_probs=186.5
Q ss_pred cccEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCC-----CCceEEECCcccCC--C
Q 000789 372 EGEIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDP-----DAGEVLIDGIDIKK--L 444 (1283)
Q Consensus 372 ~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~~--~ 444 (1283)
.+.|+++||+|+|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.++.. .
T Consensus 23 ~~~l~~~nl~~~~~~---~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g~~i~~~~~ 99 (272)
T PRK14236 23 QTALEVRNLNLFYGD---KQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDGQNIYDKKV 99 (272)
T ss_pred CcEEEEEEEEEEECC---eeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECCEECccccc
Confidence 346999999999963 3599999999999999999999999999999999999984 89999999999864 3
Q ss_pred CHHHHhcccEEEccCCCCCcccHHHHHhcCCCC--C-CH----HHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChH
Q 000789 445 QLKWIREKIGLVSQEPILFATSLRENIAYGKEN--A-TD----QEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGG 517 (1283)
Q Consensus 445 ~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~--~-~~----~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgG 517 (1283)
+...+|+.++|++|++.+|+.|++||+.++... . .. +++.++++..++.+++ .+..+..+.+||||
T Consensus 100 ~~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LS~G 172 (272)
T PRK14236 100 DVAELRRRVGMVFQRPNPFPKSIYENVVYGLRLQGINNRRVLDEAVERSLRGAALWDEV-------KDRLHENAFGLSGG 172 (272)
T ss_pred CHHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCChhH-------HHHhhCCcccCCHH
Confidence 455678899999999999989999999875321 1 11 2233344433332221 23456778899999
Q ss_pred HHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChh
Q 000789 518 QKQRIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMTSRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHD 596 (1283)
Q Consensus 518 qkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~ 596 (1283)
||||++|||||+++|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|+|++.|+++
T Consensus 173 q~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 252 (272)
T PRK14236 173 QQQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKSKYTIVIVTHNMQQAARVSDYTAFMYMGKLVEYGDTD 252 (272)
T ss_pred HHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEeCCHHHHHhhCCEEEEEECCEEEecCCHH
Confidence 999999999999999999999999999999999999999998777899999999999865 9999999999999999999
Q ss_pred HHhcC
Q 000789 597 ELIKD 601 (1283)
Q Consensus 597 ~l~~~ 601 (1283)
++...
T Consensus 253 ~~~~~ 257 (272)
T PRK14236 253 TLFTS 257 (272)
T ss_pred HHhcC
Confidence 98765
No 361
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-40 Score=377.99 Aligned_cols=220 Identities=29% Similarity=0.492 Sum_probs=187.1
Q ss_pred ccEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCC-----CCcceEEECCccCCC--CC
Q 000789 1038 GAIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYD-----PDSGHVLLDNIELPK--FK 1110 (1283)
Q Consensus 1038 g~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~-----~~~G~I~idG~di~~--~~ 1110 (1283)
..|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.++|.++.+ .+
T Consensus 38 ~~l~i~~l~~~~~~---~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G~~i~~~~~~ 114 (285)
T PRK14254 38 TVIEARDLNVFYGD---EQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRGKNVYDADVD 114 (285)
T ss_pred ceEEEEEEEEEECC---EeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccc
Confidence 35999999999974 359999999999999999999999999999999999997 689999999999864 34
Q ss_pred hHHHhcceEEEccCCCCChhhHHHHHhcCCC-CCC---CHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHH
Q 000789 1111 LSWLRQQMGLVSQEPVLFNETIRTNIAYGKQ-GGA---TEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQ 1186 (1283)
Q Consensus 1111 ~~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~-~~~---sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQ 1186 (1283)
...+|++++||||++.+|..|++||+.++.. ... .++++.++++..++...+.. .......+|||||||
T Consensus 115 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~-------~~~~~~~~LSgGe~q 187 (285)
T PRK14254 115 PVALRRRIGMVFQKPNPFPKSIYDNVAYGLKIQGYDGDIDERVEESLRRAALWDEVKD-------QLDSSGLDLSGGQQQ 187 (285)
T ss_pred hHhhhccEEEEecCCccCcCCHHHHHHHHHHHcCCcHHHHHHHHHHHHHcCCCchhHH-------HHhCCcccCCHHHHH
Confidence 5677899999999999998999999986411 011 23456677777666433321 233455689999999
Q ss_pred HHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcCCceEEEEecCchHHhh-cCEEE-EEeCCEEEEecChHHH
Q 000789 1187 RIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKN-ADIIA-VVKNGVIAEQGSHDAL 1264 (1283)
Q Consensus 1187 RlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~D~I~-vl~~G~Ive~Gt~~eL 1264 (1283)
|++|||||+++|+||||||||++||+.+.+.+.+.|+++.+++|+|+|||+++.+.. |||++ +|++|+|++.|+++++
T Consensus 188 rv~LAraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~~~tiii~tH~~~~i~~~~dri~v~l~~G~i~~~g~~~~~ 267 (285)
T PRK14254 188 RLCIARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAEEYTVVIVTHNMQQAARISDKTAVFLTGGELVEFDDTDKI 267 (285)
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEeeCCEEEEeCCHHHH
Confidence 999999999999999999999999999999999999998777899999999999876 99975 5699999999999999
Q ss_pred Hhc
Q 000789 1265 MKI 1267 (1283)
Q Consensus 1265 l~~ 1267 (1283)
.++
T Consensus 268 ~~~ 270 (285)
T PRK14254 268 FEN 270 (285)
T ss_pred HhC
Confidence 764
No 362
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=1e-40 Score=384.56 Aligned_cols=229 Identities=24% Similarity=0.379 Sum_probs=187.8
Q ss_pred cEEEEEEEEECCCCC-CcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCC---cceEEECCccCCCCChHHH
Q 000789 1039 AIELRCVSFKYPTRP-DVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPD---SGHVLLDNIELPKFKLSWL 1114 (1283)
Q Consensus 1039 ~I~~~nVsf~Y~~~~-~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~---~G~I~idG~di~~~~~~~l 1114 (1283)
-|+++|++++|+.+. ...+++||||+|++||++||+|+||||||||+++|+|+++|+ +|+|.+||.|+.+++..++
T Consensus 12 ~L~i~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~~ 91 (330)
T PRK09473 12 LLDVKDLRVTFSTPDGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKEL 91 (330)
T ss_pred eEEEeCeEEEEecCCCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHHH
Confidence 589999999996421 246999999999999999999999999999999999999996 9999999999998887665
Q ss_pred h----cceEEEccCC--CCCh-hhHHHHHhcCC--CCCCCHHH----HHHHHHHhChHHHHHhCCCCcccccCCCCCCCC
Q 000789 1115 R----QQMGLVSQEP--VLFN-ETIRTNIAYGK--QGGATEEE----IIAATEASNAHNFISALPHGYETNVGERGVQLS 1181 (1283)
Q Consensus 1115 R----~~i~~V~Qdp--~Lf~-gTIreNl~~g~--~~~~sd~e----i~~al~~a~l~~~I~~lp~Gldt~vge~G~~LS 1181 (1283)
| ++|+||||+| .++. .|+.+|+.... ....+.++ +.+.++.+++ |++. ..++....+||
T Consensus 92 ~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~L~~vgL-------~~~~-~~~~~~p~~LS 163 (330)
T PRK09473 92 NKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKGMSKAEAFEESVRMLDAVKM-------PEAR-KRMKMYPHEFS 163 (330)
T ss_pred HHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCC-------CChH-HHhcCCcccCC
Confidence 4 4799999999 3443 57777764210 11233332 3344444433 3322 22456677899
Q ss_pred hhHHHHHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchHHhh-cCEEEEEeCCEEEEe
Q 000789 1182 GGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMV--NRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQ 1258 (1283)
Q Consensus 1182 gGQrQRlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~ 1258 (1283)
||||||++|||||+.+|++||+|||||+||..+...|.+.|+++.+ +.|+|+|||+++.+.. ||+|+||.+|+|+|.
T Consensus 164 gG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~~Dri~vm~~G~ive~ 243 (330)
T PRK09473 164 GGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDKVLVMYAGRTMEY 243 (330)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEE
Confidence 9999999999999999999999999999999999999999998754 7899999999999975 999999999999999
Q ss_pred cChHHHHhccCchhHHH
Q 000789 1259 GSHDALMKITDGAYASL 1275 (1283)
Q Consensus 1259 Gt~~eLl~~~~g~y~~L 1275 (1283)
|+++++.+.+...|.+.
T Consensus 244 g~~~~i~~~p~~pyt~~ 260 (330)
T PRK09473 244 GNARDVFYQPSHPYSIG 260 (330)
T ss_pred CCHHHHHhCCCCHHHHH
Confidence 99999998766667663
No 363
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-40 Score=379.08 Aligned_cols=221 Identities=30% Similarity=0.542 Sum_probs=186.2
Q ss_pred cEEEEEEEEECCCCC--CCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCC----CHH
Q 000789 374 EIELRDVYFRYPARP--EVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKL----QLK 447 (1283)
Q Consensus 374 ~i~~~~v~f~y~~~~--~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~----~~~ 447 (1283)
.|+++||+++|++.. ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||+++... +..
T Consensus 2 ~i~~~~l~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13641 2 SIKFENVDYIYSPGTPMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPSSGTITIAGYHITPETGNKNLK 81 (287)
T ss_pred EEEEEEEEEEcCCCCCccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 378999999997321 13699999999999999999999999999999999999999999999999998643 245
Q ss_pred HHhcccEEEccCC--CCCcccHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhCCCCcc-ccccCCCCCCChHHHHHH
Q 000789 448 WIREKIGLVSQEP--ILFATSLRENIAYGKE--NATDQEIRTAIELANAAKFIDKLPKGLD-TMAGEHGTQLSGGQKQRI 522 (1283)
Q Consensus 448 ~~r~~i~~v~Q~~--~l~~~ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~lp~g~~-t~~~~~g~~LSgGqkqri 522 (1283)
..++.|+|++|+| .+|..|++|||.++.. ....++..+ .+.++++.+ |++ ........+||||||||+
T Consensus 82 ~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--gL~~~~~~~~~~~LSgGq~qrl 154 (287)
T PRK13641 82 KLRKKVSLVFQFPEAQLFENTVLKDVEFGPKNFGFSEDEAKE-----KALKWLKKV--GLSEDLISKSPFELSGGQMRRV 154 (287)
T ss_pred HHHhceEEEEeChhhhhccchHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CCChhHhhCCcccCCHHHHHHH
Confidence 6678899999998 5777899999987532 122222221 123455555 775 355777889999999999
Q ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHHhc
Q 000789 523 AIARAILKNPKILLLDEATSALDAESERIVQDALVKIM-TSRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDELIK 600 (1283)
Q Consensus 523 aiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~ 600 (1283)
+|||||+.+|++|||||||++||+.+.+.+.+.|+++. ++.|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 155 ~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 234 (287)
T PRK13641 155 AIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMDDVAEYADDVLVLEHGKLIKHASPKEIFS 234 (287)
T ss_pred HHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 99999999999999999999999999999999999885 46899999999999865 99999999999999999998865
Q ss_pred C
Q 000789 601 D 601 (1283)
Q Consensus 601 ~ 601 (1283)
.
T Consensus 235 ~ 235 (287)
T PRK13641 235 D 235 (287)
T ss_pred C
Confidence 3
No 364
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-40 Score=377.27 Aligned_cols=218 Identities=31% Similarity=0.546 Sum_probs=184.6
Q ss_pred EEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHHhcccE
Q 000789 375 IELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWIREKIG 454 (1283)
Q Consensus 375 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 454 (1283)
++++||+++|++. .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+...++++++
T Consensus 4 l~~~~l~~~~~~~--~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 81 (277)
T PRK13652 4 IETRDLCYSYSGS--KEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPTSGSVLIRGEPITKENIREVRKFVG 81 (277)
T ss_pred EEEEEEEEEeCCC--CceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhheE
Confidence 7899999999632 35999999999999999999999999999999999999999999999999998777777888999
Q ss_pred EEccCC--CCCcccHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHhc
Q 000789 455 LVSQEP--ILFATSLRENIAYGKE--NATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARAILK 530 (1283)
Q Consensus 455 ~v~Q~~--~l~~~ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARal~~ 530 (1283)
||+|++ .+|+.|+.||+.++.. ..+.++..+ .+.+.++.+ |+.......+..||||||||++|||||+.
T Consensus 82 ~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~Gq~qrl~laraL~~ 154 (277)
T PRK13652 82 LVFQNPDDQIFSPTVEQDIAFGPINLGLDEETVAH-----RVSSALHML--GLEELRDRVPHHLSGGEKKRVAIAGVIAM 154 (277)
T ss_pred EEecCcccccccccHHHHHHhHHHHcCCCHHHHHH-----HHHHHHHHC--CChhHhcCCcccCCHHHHHHHHHHHHHHc
Confidence 999998 3778899999987532 122222111 112333333 44444455567999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhh-ccCEEEEEeCCEEeEecChhHHhcC
Q 000789 531 NPKILLLDEATSALDAESERIVQDALVKIMT--SRTTVVVAHRLTTIR-NADLIAVVHQGKIVEKGTHDELIKD 601 (1283)
Q Consensus 531 ~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~-~~d~i~vl~~G~i~~~g~~~~l~~~ 601 (1283)
+|++|||||||++||+.+.+.+.+.++++.+ ++|+|++||+++.+. .||+|++|++|++++.|++++++..
T Consensus 155 ~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~~drv~~l~~G~i~~~g~~~~~~~~ 228 (277)
T PRK13652 155 EPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLDLVPEMADYIYVMDKGRIVAYGTVEEIFLQ 228 (277)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEEECCHHHHhcC
Confidence 9999999999999999999999999998754 689999999999986 5999999999999999999999764
No 365
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=3.4e-41 Score=368.22 Aligned_cols=199 Identities=26% Similarity=0.445 Sum_probs=170.2
Q ss_pred EEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHhcceEE
Q 000789 1041 ELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMGL 1120 (1283)
Q Consensus 1041 ~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~~ 1120 (1283)
+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++. .+|++++|
T Consensus 1 ~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~-----~~~~~i~~ 72 (213)
T cd03235 1 EVEDLTVSYGG---HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPTSGSIRVFGKPLE-----KERKRIGY 72 (213)
T ss_pred CcccceeEECC---EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCccHH-----HHHhheEE
Confidence 36899999974 35999999999999999999999999999999999999999999999998764 46889999
Q ss_pred EccCCCC---ChhhHHHHHhcCCCCC---------CCHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHH
Q 000789 1121 VSQEPVL---FNETIRTNIAYGKQGG---------ATEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRI 1188 (1283)
Q Consensus 1121 V~Qdp~L---f~gTIreNl~~g~~~~---------~sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRl 1188 (1283)
|||+|.+ |+.|++||+.++.... ..++++.++++..++.++... ...+||||||||+
T Consensus 73 v~q~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LSgG~~qrv 141 (213)
T cd03235 73 VPQRRSIDRDFPISVRDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLSELADR-----------QIGELSGGQQQRV 141 (213)
T ss_pred eccccccccCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHcCCHHHHhC-----------CcccCCHHHHHHH
Confidence 9999976 5689999998652210 123456677777777655443 2347999999999
Q ss_pred HHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchHHhh-cCEEEEEeCCEEEEec
Q 000789 1189 AIARAVLKNPKILLLDEATSALDAESERVVQDALERVM-VNRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQG 1259 (1283)
Q Consensus 1189 aiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~G 1259 (1283)
+|||||+++|++|||||||++||+++.+.+.+.|+++. +++|+|+|||+++.+.. ||+|++|++| +++.|
T Consensus 142 ~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~~-~~~~g 213 (213)
T cd03235 142 LLARALVQDPDLLLLDEPFAGVDPKTQEDIYELLRELRREGMTILVVTHDLGLVLEYFDRVLLLNRT-VVASG 213 (213)
T ss_pred HHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEcCc-EeecC
Confidence 99999999999999999999999999999999999875 57899999999999876 9999999986 56654
No 366
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=7.6e-41 Score=372.31 Aligned_cols=217 Identities=32% Similarity=0.563 Sum_probs=186.4
Q ss_pred EEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCC--CHHHHhcc
Q 000789 375 IELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKL--QLKWIREK 452 (1283)
Q Consensus 375 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~--~~~~~r~~ 452 (1283)
|+++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++... +...++++
T Consensus 2 l~~~~l~~~~~~---~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 78 (240)
T PRK09493 2 IEFKNVSKHFGP---TQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIVDGLKVNDPKVDERLIRQE 78 (240)
T ss_pred EEEEeEEEEECC---eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCChhHHHHhhc
Confidence 689999999963 3699999999999999999999999999999999999999999999999998764 33567889
Q ss_pred cEEEccCCCCCc-ccHHHHHhcCCC---CCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHH
Q 000789 453 IGLVSQEPILFA-TSLRENIAYGKE---NATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARAI 528 (1283)
Q Consensus 453 i~~v~Q~~~l~~-~ti~~ni~~~~~---~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARal 528 (1283)
++|++|++.++. .|++||+.++.. ..+..+..+ .+.+.++.+ |++.........||||||||++||||+
T Consensus 79 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrv~la~al 151 (240)
T PRK09493 79 AGMVFQQFYLFPHLTALENVMFGPLRVRGASKEEAEK-----QARELLAKV--GLAERAHHYPSELSGGQQQRVAIARAL 151 (240)
T ss_pred eEEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHH-----HHHHHHHHc--CChHHHhcChhhcCHHHHHHHHHHHHH
Confidence 999999998886 599999987531 112222111 223455555 777667777889999999999999999
Q ss_pred hcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHHhcC
Q 000789 529 LKNPKILLLDEATSALDAESERIVQDALVKIM-TSRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDELIKD 601 (1283)
Q Consensus 529 ~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~ 601 (1283)
+.+|+++||||||++||+++...+.+.|+++. +++|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 152 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 226 (240)
T PRK09493 152 AVKPKLMLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGDPQVLIKN 226 (240)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeeCCHHHHhcC
Confidence 99999999999999999999999999999875 47899999999999865 999999999999999999998764
No 367
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-40 Score=376.75 Aligned_cols=220 Identities=33% Similarity=0.610 Sum_probs=187.0
Q ss_pred cEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHHhccc
Q 000789 374 EIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWIREKI 453 (1283)
Q Consensus 374 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 453 (1283)
.|+++|++++|++. +.++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+|+++
T Consensus 7 ~l~~~nl~~~~~~~-~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~i 85 (271)
T PRK13632 7 MIKVENVSFSYPNS-ENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQSGEIKIDGITISKENLKEIRKKI 85 (271)
T ss_pred EEEEEeEEEEcCCC-CccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEecCcCCHHHHhcce
Confidence 58999999999632 34699999999999999999999999999999999999999999999999999877777888999
Q ss_pred EEEccCC--CCCcccHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHh
Q 000789 454 GLVSQEP--ILFATSLRENIAYGKEN--ATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARAIL 529 (1283)
Q Consensus 454 ~~v~Q~~--~l~~~ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARal~ 529 (1283)
+||+|++ .++..|++||+.++... .+.++..+ .+.+.++.+ |++........+||||||||++|||||+
T Consensus 86 ~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~laral~ 158 (271)
T PRK13632 86 GIIFQNPDNQFIGATVEDDIAFGLENKKVPPKKMKD-----IIDDLAKKV--GMEDYLDKEPQNLSGGQKQRVAIASVLA 158 (271)
T ss_pred EEEEeCHHHhcCcccHHHHHHhHHHHcCCCHHHHHH-----HHHHHHHHc--CCHHHhhCCcccCCHHHHHHHHHHHHHH
Confidence 9999998 35567999999885321 22222211 122344444 5555566667899999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhccCEEEEEeCCEEeEecChhHHhcC
Q 000789 530 KNPKILLLDEATSALDAESERIVQDALVKIMT--SRTTVVVAHRLTTIRNADLIAVVHQGKIVEKGTHDELIKD 601 (1283)
Q Consensus 530 ~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~~~l~~~ 601 (1283)
.+|++|||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+..||+|++|++|++++.|+.+++...
T Consensus 159 ~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 232 (271)
T PRK13632 159 LNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDEAILADKVIVFSEGKLIAQGKPKEILNN 232 (271)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhHHhhCCEEEEEECCEEEEecCHHHHhcC
Confidence 99999999999999999999999999998754 4899999999999888999999999999999999888654
No 368
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=1.3e-40 Score=375.33 Aligned_cols=230 Identities=27% Similarity=0.423 Sum_probs=190.1
Q ss_pred cEEEEEEEEECCCC------CCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChH
Q 000789 1039 AIELRCVSFKYPTR------PDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLS 1112 (1283)
Q Consensus 1039 ~I~~~nVsf~Y~~~------~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~ 1112 (1283)
-|+++||+++|+.. ...++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+..
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~ 83 (267)
T PRK15112 4 LLEVRNLSKTFRYRTGWFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPTSGELLIDDHPLHFGDYS 83 (267)
T ss_pred eEEEeceEEEecCCCCcccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCchh
Confidence 48999999999631 124699999999999999999999999999999999999999999999999998765556
Q ss_pred HHhcceEEEccCCC--CCh-hhHHHHHhcCC--CCCCC----HHHHHHHHHHhChH-HHHHhCCCCcccccCCCCCCCCh
Q 000789 1113 WLRQQMGLVSQEPV--LFN-ETIRTNIAYGK--QGGAT----EEEIIAATEASNAH-NFISALPHGYETNVGERGVQLSG 1182 (1283)
Q Consensus 1113 ~lR~~i~~V~Qdp~--Lf~-gTIreNl~~g~--~~~~s----d~ei~~al~~a~l~-~~I~~lp~Gldt~vge~G~~LSg 1182 (1283)
..|+.++||||+|. ++. .|+.+|+.+.. ..... ++++.++++.+++. +... . ...+|||
T Consensus 84 ~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~----~~~~LS~ 152 (267)
T PRK15112 84 YRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNTDLEPEQREKQIIETLRQVGLLPDHAS-------Y----YPHMLAP 152 (267)
T ss_pred hHhccEEEEecCchhhcCcchhHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCChHHHh-------c----CchhcCH
Confidence 66778999999985 443 48899986421 10111 34566777777773 3322 2 2347999
Q ss_pred hHHHHHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchHHhh-cCEEEEEeCCEEEEec
Q 000789 1183 GQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMV--NRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQG 1259 (1283)
Q Consensus 1183 GQrQRlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~G 1259 (1283)
|||||++||||++++|+||||||||++||+++.+.+.+.|+++.+ ++|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 153 G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~G~i~~~~ 232 (267)
T PRK15112 153 GQKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHLGMMKHISDQVLVMHQGEVVERG 232 (267)
T ss_pred HHHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEecC
Confidence 999999999999999999999999999999999999999998753 7899999999999987 9999999999999999
Q ss_pred ChHHHHhcc-CchhHHHHHHh
Q 000789 1260 SHDALMKIT-DGAYASLVALH 1279 (1283)
Q Consensus 1260 t~~eLl~~~-~g~y~~L~~~~ 1279 (1283)
+++++.+.+ ...+++++...
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~ 253 (267)
T PRK15112 233 STADVLASPLHELTKRLIAGH 253 (267)
T ss_pred CHHHHhcCCCCHHHHHHHHhc
Confidence 999998753 34566777654
No 369
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-40 Score=378.93 Aligned_cols=220 Identities=32% Similarity=0.556 Sum_probs=185.8
Q ss_pred EEEEEEEEECCCCC--CCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCC----CHHH
Q 000789 375 IELRDVYFRYPARP--EVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKL----QLKW 448 (1283)
Q Consensus 375 i~~~~v~f~y~~~~--~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~----~~~~ 448 (1283)
|+++||+++|++.. ..++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|+++... +...
T Consensus 3 l~~~~l~~~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (280)
T PRK13649 3 INLQNVSYTYQAGTPFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPTQGSVRVDDTLITSTSKNKDIKQ 82 (280)
T ss_pred EEEEEEEEEcCCCCccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccCHHH
Confidence 78999999997422 13699999999999999999999999999999999999999999999999998753 3456
Q ss_pred HhcccEEEccCC--CCCcccHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhCCCCcc-ccccCCCCCCChHHHHHHH
Q 000789 449 IREKIGLVSQEP--ILFATSLRENIAYGKE--NATDQEIRTAIELANAAKFIDKLPKGLD-TMAGEHGTQLSGGQKQRIA 523 (1283)
Q Consensus 449 ~r~~i~~v~Q~~--~l~~~ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~lp~g~~-t~~~~~g~~LSgGqkqria 523 (1283)
+|+.|+|++|++ .+|+.|++||+.++.. ..+.++..+. +.+.++.+ |++ ........+||||||||++
T Consensus 83 ~~~~i~~~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~~--~l~~~~~~~~~~~LSgG~~qrv~ 155 (280)
T PRK13649 83 IRKKVGLVFQFPESQLFEETVLKDVAFGPQNFGVSQEEAEAL-----AREKLALV--GISESLFEKNPFELSGGQMRRVA 155 (280)
T ss_pred HHhheEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHc--CCChhhhhCCcccCCHHHHHHHH
Confidence 788999999998 6788899999987532 1223332221 23344444 665 3456777899999999999
Q ss_pred HHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC-CCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHHhcC
Q 000789 524 IARAILKNPKILLLDEATSALDAESERIVQDALVKIMT-SRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDELIKD 601 (1283)
Q Consensus 524 iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~-~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~ 601 (1283)
|||||+.+|++|||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+.. ||++++|++|++++.|+++++...
T Consensus 156 la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 235 (280)
T PRK13649 156 IAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMDDVANYADFVYVLEKGKLVLSGKPKDIFQD 235 (280)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 99999999999999999999999999999999998754 6899999999999865 999999999999999999998754
No 370
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.4e-41 Score=375.76 Aligned_cols=219 Identities=30% Similarity=0.463 Sum_probs=185.0
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCC-----CcceEEECCccCCC--CCh
Q 000789 1039 AIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDP-----DSGHVLLDNIELPK--FKL 1111 (1283)
Q Consensus 1039 ~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~-----~~G~I~idG~di~~--~~~ 1111 (1283)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+.
T Consensus 4 ~l~i~~v~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~ 80 (258)
T PRK14241 4 RIDVKDLNIYYGS---FHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDP 80 (258)
T ss_pred cEEEeeEEEEECC---EeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccCh
Confidence 4899999999974 3599999999999999999999999999999999999974 69999999999853 445
Q ss_pred HHHhcceEEEccCCCCCh-hhHHHHHhcCCC--CCCC----HHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhH
Q 000789 1112 SWLRQQMGLVSQEPVLFN-ETIRTNIAYGKQ--GGAT----EEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQ 1184 (1283)
Q Consensus 1112 ~~lR~~i~~V~Qdp~Lf~-gTIreNl~~g~~--~~~s----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQ 1184 (1283)
..+|+.++|++|++.+|. .|++||+.++.. ...+ ++.+.++++..++.+.+. ........+|||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G~ 153 (258)
T PRK14241 81 VAVRRTIGMVFQRPNPFPTMSIRDNVVAGLKLNGVRNKKDLDELVEKSLRGANLWNEVK-------DRLDKPGGGLSGGQ 153 (258)
T ss_pred HHHhcceEEEccccccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhhh-------hHhhCCcccCCHHH
Confidence 678899999999999887 599999975411 1111 234555666666643322 22334456899999
Q ss_pred HHHHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcCCceEEEEecCchHHhh-cCEEEEEe------CCEEEE
Q 000789 1185 KQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKN-ADIIAVVK------NGVIAE 1257 (1283)
Q Consensus 1185 rQRlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~D~I~vl~------~G~Ive 1257 (1283)
|||++||||++++|++|||||||++||+.+...+.+.|+++.+++|+|+|||+++.+.. ||+|++|+ +|+|++
T Consensus 154 ~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tviivsH~~~~~~~~~d~i~~l~~~~~~~~g~i~~ 233 (258)
T PRK14241 154 QQRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQDYTIVIVTHNMQQAARVSDQTAFFNLEATGKPGRLVE 233 (258)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccCCCCceEEe
Confidence 99999999999999999999999999999999999999988767899999999999865 99999997 899999
Q ss_pred ecChHHHHhc
Q 000789 1258 QGSHDALMKI 1267 (1283)
Q Consensus 1258 ~Gt~~eLl~~ 1267 (1283)
.|++++++..
T Consensus 234 ~~~~~~~~~~ 243 (258)
T PRK14241 234 IDDTEKIFSN 243 (258)
T ss_pred cCCHHHHHhC
Confidence 9999999764
No 371
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=1.1e-40 Score=369.60 Aligned_cols=212 Identities=35% Similarity=0.521 Sum_probs=183.1
Q ss_pred EEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHhcceE
Q 000789 1040 IELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMG 1119 (1283)
Q Consensus 1040 I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~ 1119 (1283)
|+++|++++|+. .++|+|+||+|.+||++||+|+||||||||+++|+|+++|++|+|.+||.++.+.+. .++.++
T Consensus 1 i~i~~l~~~~~~---~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~i~g~~~~~~~~--~~~~i~ 75 (237)
T TIGR00968 1 IEIANISKRFGS---FQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPDSGRIRLNGQDATRVHA--RDRKIG 75 (237)
T ss_pred CEEEEEEEEECC---eeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCh--hhcCEE
Confidence 578999999974 359999999999999999999999999999999999999999999999999876553 478899
Q ss_pred EEccCCCCChh-hHHHHHhcCCCC-CCC----HHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHHHH
Q 000789 1120 LVSQEPVLFNE-TIRTNIAYGKQG-GAT----EEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARA 1193 (1283)
Q Consensus 1120 ~V~Qdp~Lf~g-TIreNl~~g~~~-~~s----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiARA 1193 (1283)
|+||+|.+|.+ |++||+.++... ..+ ++++.++++..++.++..+. ..+|||||+||++||||
T Consensus 76 ~~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~lS~G~~qrl~lara 144 (237)
T TIGR00968 76 FVFQHYALFKHLTVRDNIAFGLEIRKHPKAKIKARVEELLELVQLEGLGDRY-----------PNQLSGGQRQRVALARA 144 (237)
T ss_pred EEecChhhccCCcHHHHHHhHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCC-----------hhhCCHHHHHHHHHHHH
Confidence 99999999975 999999865210 111 33455666666665544332 35899999999999999
Q ss_pred HccCCCEEEEecccCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHHHhc
Q 000789 1194 VLKNPKILLLDEATSALDAESERVVQDALERVMV--NRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDALMKI 1267 (1283)
Q Consensus 1194 ll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl~~ 1267 (1283)
++++|+++||||||++||++++..+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++++.
T Consensus 145 l~~~p~llllDEP~~~LD~~~~~~~~~~l~~~~~~~~~tvli~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~~~ 221 (237)
T TIGR00968 145 LAVEPQVLLLDEPFGALDAKVRKELRSWLRKLHDEVHVTTVFVTHDQEEAMEVADRIVVMSNGKIEQIGSPDEVYDH 221 (237)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEECCEEEEecCHHHHHcC
Confidence 9999999999999999999999999999998754 6899999999999866 999999999999999999999764
No 372
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.5e-41 Score=379.32 Aligned_cols=217 Identities=31% Similarity=0.521 Sum_probs=184.6
Q ss_pred cEEEEEEEEECCCCC---CCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCC-HHHH
Q 000789 374 EIELRDVYFRYPARP---EVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQ-LKWI 449 (1283)
Q Consensus 374 ~i~~~~v~f~y~~~~---~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~-~~~~ 449 (1283)
-|+++|++++|++.. ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||.++.+.+ ...+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~ 83 (280)
T PRK13633 4 MIKCKNVSYKYESNEESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPSEGKVYVDGLDTSDEENLWDI 83 (280)
T ss_pred eEEEeeeEEEcCCCCCCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeccccccHHHH
Confidence 489999999997421 246999999999999999999999999999999999999999999999999987643 3556
Q ss_pred hcccEEEccCCC--CCcccHHHHHhcCCCC--CCH----HHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHH
Q 000789 450 REKIGLVSQEPI--LFATSLRENIAYGKEN--ATD----QEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQR 521 (1283)
Q Consensus 450 r~~i~~v~Q~~~--l~~~ti~~ni~~~~~~--~~~----~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqr 521 (1283)
++.+|||+|+|. ++..|+.+|+.|+... .+. +++.++++.. |++........+||||||||
T Consensus 84 ~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~l~~~-----------gL~~~~~~~~~~LS~G~~qr 152 (280)
T PRK13633 84 RNKAGMVFQNPDNQIVATIVEEDVAFGPENLGIPPEEIRERVDESLKKV-----------GMYEYRRHAPHLLSGGQKQR 152 (280)
T ss_pred hhheEEEecChhhhhccccHHHHHHhhHhhcCCCHHHHHHHHHHHHHHC-----------CCHhHhhCCcccCCHHHHHH
Confidence 889999999984 6767999999986321 122 2233334433 44444555567999999999
Q ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhccCEEEEEeCCEEeEecChhHHh
Q 000789 522 IAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMT--SRTTVVVAHRLTTIRNADLIAVVHQGKIVEKGTHDELI 599 (1283)
Q Consensus 522 iaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~~~l~ 599 (1283)
++|||||+.+|++|||||||++||+.+...+.+.|+++.+ ++|+|++||+++.+..||++++|++|++++.|+++++.
T Consensus 153 v~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 232 (280)
T PRK13633 153 VAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYMEEAVEADRIIVMDSGKVVMEGTPKEIF 232 (280)
T ss_pred HHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChHHHhcCCEEEEEECCEEEEecCHHHHh
Confidence 9999999999999999999999999999999999998853 78999999999999889999999999999999999987
Q ss_pred cC
Q 000789 600 KD 601 (1283)
Q Consensus 600 ~~ 601 (1283)
.+
T Consensus 233 ~~ 234 (280)
T PRK13633 233 KE 234 (280)
T ss_pred cC
Confidence 64
No 373
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.8e-41 Score=375.33 Aligned_cols=224 Identities=32% Similarity=0.513 Sum_probs=185.1
Q ss_pred cEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCC-----CCCceEEECCcccCC--CCH
Q 000789 374 EIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYD-----PDAGEVLIDGIDIKK--LQL 446 (1283)
Q Consensus 374 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~~~g~~~~~--~~~ 446 (1283)
.|+++|++|+|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|+++.. .+.
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~~ 80 (251)
T PRK14251 4 IISAKDVHLSYGN---YEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMDL 80 (251)
T ss_pred eEEEEeeEEEECC---eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccchH
Confidence 4899999999963 369999999999999999999999999999999999997 489999999998854 344
Q ss_pred HHHhcccEEEccCCCCCcccHHHHHhcCCCC--C-CHH----HHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHH
Q 000789 447 KWIREKIGLVSQEPILFATSLRENIAYGKEN--A-TDQ----EIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQK 519 (1283)
Q Consensus 447 ~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~--~-~~~----~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqk 519 (1283)
..+++.++|++|++.+|+.|++||+.++... . ..+ ++.++++..++++ .........+.+||||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~~~~~~~~~~~~LS~Gq~ 153 (251)
T PRK14251 81 VELRKEVGMVFQQPTPFPFSVYDNVAYGLKIAGVKDKELIDQRVEESLKQAAIWK-------ETKDNLDRNAQAFSGGQQ 153 (251)
T ss_pred HHhhccEEEEecCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCCc-------chHHHhccChhhCCHHHH
Confidence 5678889999999999999999999875321 1 111 2222333222211 011234567789999999
Q ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHH
Q 000789 520 QRIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMTSRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDEL 598 (1283)
Q Consensus 520 qriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l 598 (1283)
||++|||||+++|+++||||||++||+.+.+.+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 154 qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 233 (251)
T PRK14251 154 QRICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKHQYTFIMVTHNLQQAGRISDQTAFLMNGDLIEAGPTEEM 233 (251)
T ss_pred HHHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHcCCeEEEEECCHHHHHhhcCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998777899999999999876 999999999999999999998
Q ss_pred hcCCCChhH
Q 000789 599 IKDPEGPYT 607 (1283)
Q Consensus 599 ~~~~~~~~~ 607 (1283)
...+...|.
T Consensus 234 ~~~~~~~~~ 242 (251)
T PRK14251 234 FIAPKKQIT 242 (251)
T ss_pred HhCCCCHHH
Confidence 765443343
No 374
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-40 Score=379.12 Aligned_cols=226 Identities=28% Similarity=0.449 Sum_probs=188.2
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCC-----CCcceEEECCccCCCC--Ch
Q 000789 1039 AIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYD-----PDSGHVLLDNIELPKF--KL 1111 (1283)
Q Consensus 1039 ~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~-----~~~G~I~idG~di~~~--~~ 1111 (1283)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+.+ |++|+|.+||.++... +.
T Consensus 39 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g~~i~~~~~~~ 115 (286)
T PRK14275 39 HVVAKNFSIYYGE---FEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDGEDIYGKFTDE 115 (286)
T ss_pred EEEEeeeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECCEEhhhcccch
Confidence 5899999999974 359999999999999999999999999999999999865 4999999999988643 33
Q ss_pred HHHhcceEEEccCCCCChhhHHHHHhcCCC-CCC-C----HHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHH
Q 000789 1112 SWLRQQMGLVSQEPVLFNETIRTNIAYGKQ-GGA-T----EEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQK 1185 (1283)
Q Consensus 1112 ~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~-~~~-s----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQr 1185 (1283)
..+|++++||||+|.+|+.|++||+.++.. ... + ++++.++++..++.+.+. .........||||||
T Consensus 116 ~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LSgGq~ 188 (286)
T PRK14275 116 VLLRKKIGMVFQKPNPFPKSIFDNIAYGPRLHGINDKKQLEEIVEKSLRKAALWDEVS-------DRLDKNALGLSGGQQ 188 (286)
T ss_pred HHhhhcEEEECCCCCCCccCHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHhCCccchh-------hHhhCChhhCCHHHH
Confidence 457889999999999998999999987521 111 1 234556666666543221 122344568999999
Q ss_pred HHHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcCCceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHH
Q 000789 1186 QRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDAL 1264 (1283)
Q Consensus 1186 QRlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eL 1264 (1283)
||++|||||+.+|++|||||||++||+++...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 189 qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tvIivsH~~~~~~~~~d~i~~L~~G~i~~~g~~~~~ 268 (286)
T PRK14275 189 QRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRGSYTIMIVTHNMQQASRVSDYTMFFYEGVLVEHAPTAQL 268 (286)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988777899999999999876 999999999999999999999
Q ss_pred HhccCchhHH
Q 000789 1265 MKITDGAYAS 1274 (1283)
Q Consensus 1265 l~~~~g~y~~ 1274 (1283)
.+++...|.+
T Consensus 269 ~~~~~~~~~~ 278 (286)
T PRK14275 269 FTNPKDRMTE 278 (286)
T ss_pred HhCCCcHHHH
Confidence 8754444433
No 375
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-40 Score=375.84 Aligned_cols=218 Identities=33% Similarity=0.570 Sum_probs=185.7
Q ss_pred EEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCC-HHHHhccc
Q 000789 375 IELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQ-LKWIREKI 453 (1283)
Q Consensus 375 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~-~~~~r~~i 453 (1283)
|+++|++++|++ +.++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+ ...+++.+
T Consensus 2 l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 79 (274)
T PRK13644 2 IRLENVSYSYPD--GTPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQKGKVLVSGIDTGDFSKLQGIRKLV 79 (274)
T ss_pred EEEEEEEEEcCC--CCceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEECCccccHHHHHhhe
Confidence 689999999963 235999999999999999999999999999999999999999999999999997765 35678899
Q ss_pred EEEccCCC--CCcccHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHh
Q 000789 454 GLVSQEPI--LFATSLRENIAYGKEN--ATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARAIL 529 (1283)
Q Consensus 454 ~~v~Q~~~--l~~~ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARal~ 529 (1283)
+||+|+|. +++.|++|||.++... .+.++..+. +.+.++.+ |++......+..||||||||++|||||+
T Consensus 80 ~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~-----~~~~l~~~--gl~~~~~~~~~~LS~G~~qrv~laral~ 152 (274)
T PRK13644 80 GIVFQNPETQFVGRTVEEDLAFGPENLCLPPIEIRKR-----VDRALAEI--GLEKYRHRSPKTLSGGQGQCVALAGILT 152 (274)
T ss_pred EEEEEChhhhcccchHHHHHHhhHHHcCCCHHHHHHH-----HHHHHHHC--CCHHHhcCCcccCCHHHHHHHHHHHHHH
Confidence 99999985 5678999999886421 222222211 22334444 6665666677899999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhccCEEEEEeCCEEeEecChhHHhcC
Q 000789 530 KNPKILLLDEATSALDAESERIVQDALVKIM-TSRTTVVVAHRLTTIRNADLIAVVHQGKIVEKGTHDELIKD 601 (1283)
Q Consensus 530 ~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~~~l~~~ 601 (1283)
.+|+||||||||++||+.+...+.+.|+++. +++|+|++||+++.+..||+|++|++|++++.|+++++...
T Consensus 153 ~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 225 (274)
T PRK13644 153 MEPECLIFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLEELHDADRIIVMDRGKIVLEGEPENVLSD 225 (274)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHhhCCEEEEEECCEEEEECCHHHHhcC
Confidence 9999999999999999999999999999875 47899999999999988999999999999999999988654
No 376
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.9e-41 Score=363.96 Aligned_cols=202 Identities=32% Similarity=0.510 Sum_probs=176.0
Q ss_pred EEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHhcceE
Q 000789 1040 IELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMG 1119 (1283)
Q Consensus 1040 I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~ 1119 (1283)
|+++|++++|++. . .|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||.++...+. .|+.++
T Consensus 1 i~~~~l~~~~~~~---~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~~G~i~~~g~~~~~~~~--~~~~i~ 73 (211)
T cd03298 1 VRLDKIRFSYGEQ---P--MHFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQSGRVLINGVDVTAAPP--ADRPVS 73 (211)
T ss_pred CEEEeEEEEeCCE---e--cceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCcCCH--hHccEE
Confidence 5799999999742 2 39999999999999999999999999999999999999999999999976653 467899
Q ss_pred EEccCCCCChh-hHHHHHhcCCCCC-----CCHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHHHH
Q 000789 1120 LVSQEPVLFNE-TIRTNIAYGKQGG-----ATEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARA 1193 (1283)
Q Consensus 1120 ~V~Qdp~Lf~g-TIreNl~~g~~~~-----~sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiARA 1193 (1283)
|+||++.+|.+ |++||+.++.... ..++++.++++..++.+.....| .+||||||||++||||
T Consensus 74 ~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~ia~a 142 (211)
T cd03298 74 MLFQENNLFAHLTVEQNVGLGLSPGLKLTAEDRQAIEVALARVGLAGLEKRLP-----------GELSGGERQRVALARV 142 (211)
T ss_pred EEecccccCCCCcHHHHHhcccccccCccHHHHHHHHHHHHHcCCHHHHhCCc-----------ccCCHHHHHHHHHHHH
Confidence 99999999975 9999998653211 13456778888888876665544 3799999999999999
Q ss_pred HccCCCEEEEecccCCCCHHHHHHHHHHHHHHc--CCceEEEEecCchHHhh-cCEEEEEeCCEEEEec
Q 000789 1194 VLKNPKILLLDEATSALDAESERVVQDALERVM--VNRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQG 1259 (1283)
Q Consensus 1194 ll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~--~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~G 1259 (1283)
++++|++|||||||++||+++...+.+.|+++. .++|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 143 l~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 143 LVRDKPVLLLDEPFAALDPALRAEMLDLVLDLHAETKMTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 999999999999999999999999999999875 37899999999999976 9999999999998765
No 377
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-40 Score=373.27 Aligned_cols=224 Identities=27% Similarity=0.470 Sum_probs=185.8
Q ss_pred ccEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCC--C---CCceEEECCcccCCC--C
Q 000789 373 GEIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYD--P---DAGEVLIDGIDIKKL--Q 445 (1283)
Q Consensus 373 ~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~--~---~~G~i~~~g~~~~~~--~ 445 (1283)
+.|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++ | ++|+|.++|.++... +
T Consensus 3 ~~l~~~nl~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~ 79 (252)
T PRK14256 3 NKVKLEQLNVHFGK---NHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGVD 79 (252)
T ss_pred cEEEEEEEEEEeCC---eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccCC
Confidence 56999999999963 369999999999999999999999999999999999986 4 689999999998643 3
Q ss_pred HHHHhcccEEEccCCCCCc-ccHHHHHhcCCCC---CCH----HHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChH
Q 000789 446 LKWIREKIGLVSQEPILFA-TSLRENIAYGKEN---ATD----QEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGG 517 (1283)
Q Consensus 446 ~~~~r~~i~~v~Q~~~l~~-~ti~~ni~~~~~~---~~~----~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgG 517 (1283)
...+|+.++|++|++.+|. .|++||+.++... .+. +++.++++..++.+++ ....+..+.+||||
T Consensus 80 ~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LS~G 152 (252)
T PRK14256 80 PVSIRRRVGMVFQKPNPFPAMSIYDNVIAGYKLNGRVNRSEADEIVESSLKRVALWDEV-------KDRLKSNAMELSGG 152 (252)
T ss_pred hHHhhccEEEEecCCCCCCcCcHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhh-------hHHhhCCcCcCCHH
Confidence 4567889999999999998 5999999875311 111 1223333333332221 12345567899999
Q ss_pred HHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChh
Q 000789 518 QKQRIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMTSRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHD 596 (1283)
Q Consensus 518 qkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~ 596 (1283)
||||++|||||+.+|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||++++|++|+|++.|+++
T Consensus 153 ~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~ 232 (252)
T PRK14256 153 QQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKEKYTIIIVTHNMQQAARVSDYTAFFYMGDLVECGETK 232 (252)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCcEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999999998777899999999999865 9999999999999999999
Q ss_pred HHhcCCCChh
Q 000789 597 ELIKDPEGPY 606 (1283)
Q Consensus 597 ~l~~~~~~~~ 606 (1283)
++...+...|
T Consensus 233 ~~~~~~~~~~ 242 (252)
T PRK14256 233 KIFTTPEKKQ 242 (252)
T ss_pred HHHhCCCcHH
Confidence 9976644433
No 378
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=1.3e-40 Score=371.11 Aligned_cols=221 Identities=27% Similarity=0.460 Sum_probs=188.4
Q ss_pred EEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHH-Hhccc
Q 000789 375 IELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKW-IREKI 453 (1283)
Q Consensus 375 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~-~r~~i 453 (1283)
|+++|+++.|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... .++.+
T Consensus 3 i~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i 79 (242)
T TIGR03411 3 LYLEGLSVSFDG---FKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPDEGSVLFGGTDLTGLPEHQIARAGI 79 (242)
T ss_pred EEEEeeEEEcCC---eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCeecCCCCHHHHHhcCe
Confidence 789999999963 36999999999999999999999999999999999999999999999999988776554 35679
Q ss_pred EEEccCCCCCcc-cHHHHHhcCCCCCCH--HH---HHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHH
Q 000789 454 GLVSQEPILFAT-SLRENIAYGKENATD--QE---IRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARA 527 (1283)
Q Consensus 454 ~~v~Q~~~l~~~-ti~~ni~~~~~~~~~--~~---~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARa 527 (1283)
+|++|++.+|++ |++||+.++...... .. .........++++++.+ |++........+||||||||++||||
T Consensus 80 ~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~Ge~qrv~lara 157 (242)
T TIGR03411 80 GRKFQKPTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETI--GLADEADRLAGLLSHGQKQWLEIGML 157 (242)
T ss_pred eEeccccccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHHH
Confidence 999999999986 999999986321000 00 00011112344566666 77777778888999999999999999
Q ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHHhc
Q 000789 528 ILKNPKILLLDEATSALDAESERIVQDALVKIMTSRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDELIK 600 (1283)
Q Consensus 528 l~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~ 600 (1283)
++.+|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 158 l~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~ 231 (242)
T TIGR03411 158 LMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAGKHSVVVVEHDMEFVRSIADKVTVLHQGSVLAEGSLDQVQA 231 (242)
T ss_pred HhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeEEeeCCHHHHhc
Confidence 99999999999999999999999999999998778999999999999976 99999999999999999998864
No 379
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7e-41 Score=374.77 Aligned_cols=222 Identities=33% Similarity=0.509 Sum_probs=183.7
Q ss_pred cEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcC---CCC--CCceEEECCcccCCC--CH
Q 000789 374 EIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERF---YDP--DAGEVLIDGIDIKKL--QL 446 (1283)
Q Consensus 374 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~---~~~--~~G~i~~~g~~~~~~--~~ 446 (1283)
.|+++|+++.|++ .++|+|+||++++||+++|+||||||||||+++|+|+ ++| ++|+|.+||+++... +.
T Consensus 3 ~l~~~~~~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 79 (250)
T PRK14245 3 KIDARDVNFWYGD---FHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDKGVQV 79 (250)
T ss_pred EEEEEEEEEEECC---EeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEecccccccH
Confidence 5899999999963 3599999999999999999999999999999999997 454 589999999998654 34
Q ss_pred HHHhcccEEEccCCCCCcccHHHHHhcCCCC--C-CHHHHHHHHHHhcHHHHHHhC--CCCccccccCCCCCCChHHHHH
Q 000789 447 KWIREKIGLVSQEPILFATSLRENIAYGKEN--A-TDQEIRTAIELANAAKFIDKL--PKGLDTMAGEHGTQLSGGQKQR 521 (1283)
Q Consensus 447 ~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~--~-~~~~~~~~~~~~~~~~~i~~l--p~g~~t~~~~~g~~LSgGqkqr 521 (1283)
..+++.++|+||++.+|+.|++||+.++... . ..++..+. +.+.++.+ ++.+.+...+.+.+||||||||
T Consensus 80 ~~~~~~i~~v~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~-----~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qr 154 (250)
T PRK14245 80 DELRKNVGMVFQRPNPFPKSIFENVAYGLRVNGVKDNAFIRQR-----VEETLKGAALWDEVKDKLKESAFALSGGQQQR 154 (250)
T ss_pred HHHhhheEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHH-----HHHHHHHcCCCcchhhhhhCCcccCCHHHHHH
Confidence 5678899999999999988999999875321 1 11111111 12233333 1112344567788999999999
Q ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHHhc
Q 000789 522 IAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMTSRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDELIK 600 (1283)
Q Consensus 522 iaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~ 600 (1283)
++|||||+.+|++|||||||++||+.+.+.+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 155 v~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~v~~l~~G~~~~~~~~~~~~~ 234 (250)
T PRK14245 155 LCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELKKDYTIVIVTHNMQQAARVSDKTAFFYMGEMVEYDDTKKIFT 234 (250)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEECCHHHHhc
Confidence 99999999999999999999999999999999999998778999999999999865 99999999999999999999986
Q ss_pred CCC
Q 000789 601 DPE 603 (1283)
Q Consensus 601 ~~~ 603 (1283)
++.
T Consensus 235 ~~~ 237 (250)
T PRK14245 235 NPE 237 (250)
T ss_pred CCC
Confidence 533
No 380
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=7.1e-41 Score=364.28 Aligned_cols=203 Identities=28% Similarity=0.495 Sum_probs=174.5
Q ss_pred EEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHHhcccE
Q 000789 375 IELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWIREKIG 454 (1283)
Q Consensus 375 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 454 (1283)
|+++||+++|++ .++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|.++... ..++++++
T Consensus 1 l~~~~l~~~~~~---~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~--~~~~~~i~ 75 (208)
T cd03268 1 LKTNDLTKTYGK---KRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPDSGEITFDGKSYQKN--IEALRRIG 75 (208)
T ss_pred CEEEEEEEEECC---eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCCcccch--HHHHhhEE
Confidence 478999999963 4699999999999999999999999999999999999999999999999988654 45677899
Q ss_pred EEccCCCCCc-ccHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHhcC
Q 000789 455 LVSQEPILFA-TSLRENIAYGKE--NATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARAILKN 531 (1283)
Q Consensus 455 ~v~Q~~~l~~-~ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARal~~~ 531 (1283)
||+|++.+|. .|++||+.++.. ..+++++.++++..++.+ .....+..||||||||++||||++.+
T Consensus 76 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LS~G~~qrv~la~al~~~ 144 (208)
T cd03268 76 ALIEAPGFYPNLTARENLRLLARLLGIRKKRIDEVLDVVGLKD-----------SAKKKVKGFSLGMKQRLGIALALLGN 144 (208)
T ss_pred EecCCCccCccCcHHHHHHHHHHhcCCcHHHHHHHHHHcCCHH-----------HHhhhHhhCCHHHHHHHHHHHHHhcC
Confidence 9999998885 699999987532 123444555555554443 34455678999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhc-cCEEEEEeCCEEeEec
Q 000789 532 PKILLLDEATSALDAESERIVQDALVKIM-TSRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKG 593 (1283)
Q Consensus 532 ~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g 593 (1283)
|++|||||||++||+.+.+.+.+.|+++. +++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 145 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~g~i~~~g 208 (208)
T cd03268 145 PDLLILDEPTNGLDPDGIKELRELILSLRDQGITVLISSHLLSEIQKVADRIGIINKGKLIEEG 208 (208)
T ss_pred CCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecC
Confidence 99999999999999999999999999876 47899999999999875 9999999999998765
No 381
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=7.4e-41 Score=385.79 Aligned_cols=231 Identities=24% Similarity=0.419 Sum_probs=188.6
Q ss_pred cEEEEEEEEECCCCC-CCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCC---CceEEECCcccCCCCHHHH
Q 000789 374 EIELRDVYFRYPARP-EVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPD---AGEVLIDGIDIKKLQLKWI 449 (1283)
Q Consensus 374 ~i~~~~v~f~y~~~~-~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~---~G~i~~~g~~~~~~~~~~~ 449 (1283)
-++++|++++|+... ..++++||||+|++||++||+|+||||||||+++|+|+++|+ +|+|.+||+++..++...+
T Consensus 12 ~L~i~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~~ 91 (330)
T PRK09473 12 LLDVKDLRVTFSTPDGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKEL 91 (330)
T ss_pred eEEEeCeEEEEecCCCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHHH
Confidence 589999999996321 246999999999999999999999999999999999999996 9999999999998877655
Q ss_pred h----cccEEEccCC--CCCc-ccHHHHHhcCC---CCCCHHHHHHHHHHhcHHHHHHh--CCCCccccccCCCCCCChH
Q 000789 450 R----EKIGLVSQEP--ILFA-TSLRENIAYGK---ENATDQEIRTAIELANAAKFIDK--LPKGLDTMAGEHGTQLSGG 517 (1283)
Q Consensus 450 r----~~i~~v~Q~~--~l~~-~ti~~ni~~~~---~~~~~~~~~~~~~~~~~~~~i~~--lp~g~~t~~~~~g~~LSgG 517 (1283)
+ ++|+||+|+| .+++ .|+.+|+.... ...+.++..+. +.+.++. +|++. ..++..+.+||||
T Consensus 92 ~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~~~~~~~~~~~-----~~~~L~~vgL~~~~-~~~~~~p~~LSgG 165 (330)
T PRK09473 92 NKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKGMSKAEAFEE-----SVRMLDAVKMPEAR-KRMKMYPHEFSGG 165 (330)
T ss_pred HHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHH-----HHHHHHHcCCCChH-HHhcCCcccCCHH
Confidence 3 4799999998 4554 37877775321 11223222211 1122222 33322 3357788999999
Q ss_pred HHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhc-cCEEEEEeCCEEeEecC
Q 000789 518 QKQRIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMT--SRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGT 594 (1283)
Q Consensus 518 qkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~ 594 (1283)
||||++|||||+.+|++||+|||||+||+.+...+.+.|+++.+ +.|+|+|||+++.+.. ||+|+||++|+|+|.|+
T Consensus 166 ~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~~Dri~vm~~G~ive~g~ 245 (330)
T PRK09473 166 MRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDKVLVMYAGRTMEYGN 245 (330)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEECC
Confidence 99999999999999999999999999999999999999998864 6899999999999975 99999999999999999
Q ss_pred hhHHhcCCCChhHHHH
Q 000789 595 HDELIKDPEGPYTQLV 610 (1283)
Q Consensus 595 ~~~l~~~~~~~~~~~~ 610 (1283)
++++.+++...|.+..
T Consensus 246 ~~~i~~~p~~pyt~~l 261 (330)
T PRK09473 246 ARDVFYQPSHPYSIGL 261 (330)
T ss_pred HHHHHhCCCCHHHHHH
Confidence 9999988777787643
No 382
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=9.7e-41 Score=374.78 Aligned_cols=213 Identities=26% Similarity=0.400 Sum_probs=185.2
Q ss_pred EEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHhcceE
Q 000789 1040 IELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMG 1119 (1283)
Q Consensus 1040 I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~ 1119 (1283)
|+++|++++|++ .++|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+.++
T Consensus 2 l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 78 (256)
T TIGR03873 2 LRLSRVSWSAGG---RLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPDAGTVDLAGVDLHGLSRRARARRVA 78 (256)
T ss_pred ceEEeEEEEECC---EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEEcccCCHHHHhhheE
Confidence 789999999974 36999999999999999999999999999999999999999999999999999888888888999
Q ss_pred EEccCCC-CChhhHHHHHhcCCCC-------C--CCHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHH
Q 000789 1120 LVSQEPV-LFNETIRTNIAYGKQG-------G--ATEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIA 1189 (1283)
Q Consensus 1120 ~V~Qdp~-Lf~gTIreNl~~g~~~-------~--~sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRla 1189 (1283)
|+||++. .+..|++||+.++... . ..++++.++++..++.+... .....||||||||++
T Consensus 79 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrl~ 147 (256)
T TIGR03873 79 LVEQDSDTAVPLTVRDVVALGRIPHRSLWAGDSPHDAAVVDRALARTELSHLAD-----------RDMSTLSGGERQRVH 147 (256)
T ss_pred EecccCccCCCCCHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHcCcHhhhc-----------CCcccCCHHHHHHHH
Confidence 9999995 4578999999875210 0 11234566676666654432 234589999999999
Q ss_pred HHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcC-CceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHHHh
Q 000789 1190 IARAVLKNPKILLLDEATSALDAESERVVQDALERVMV-NRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDALMK 1266 (1283)
Q Consensus 1190 iARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~-~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl~ 1266 (1283)
||||++.+|+++||||||++||+.+...+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 148 la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 226 (256)
T TIGR03873 148 VARALAQEPKLLLLDEPTNHLDVRAQLETLALVRELAATGVTVVAALHDLNLAASYCDHVVVLDGGRVVAAGPPREVLT 226 (256)
T ss_pred HHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCEEEecCHHHhhC
Confidence 99999999999999999999999999999999998753 6899999999999955 99999999999999999999865
No 383
>cd03290 ABCC_SUR1_N The SUR domain 1. The sulfonylurea receptor SUR is an ATP transporter of the ABCC/MRP family with tandem ATPase binding domains. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=1.6e-40 Score=364.16 Aligned_cols=210 Identities=32% Similarity=0.497 Sum_probs=187.1
Q ss_pred EEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCCh----HHHhc
Q 000789 1041 ELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKL----SWLRQ 1116 (1283)
Q Consensus 1041 ~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~----~~lR~ 1116 (1283)
.+.|+.|+|+.+ .++++|+||+|++||.++|+|+||||||||+++|+|+++|++|+|.+||.++.+.+. ...|+
T Consensus 2 ~~~~~~~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 79 (218)
T cd03290 2 QVTNGYFSWGSG--LATLSNINIRIPTGQLTMIVGQVGCGKSSLLLAILGEMQTLEGKVHWSNKNESEPSFEATRSRNRY 79 (218)
T ss_pred eeeeeEEecCCC--CcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCcccccccccccchhhcc
Confidence 578999999844 469999999999999999999999999999999999999999999999998876542 34567
Q ss_pred ceEEEccCCCCChhhHHHHHhcCCCCCCCHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHHHHHcc
Q 000789 1117 QMGLVSQEPVLFNETIRTNIAYGKQGGATEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLK 1196 (1283)
Q Consensus 1117 ~i~~V~Qdp~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiARAll~ 1196 (1283)
.++|++|+|.+|+.|++||+.++. ..++++..++++..++.+++..+|.|+++.++....+||||||||++||||+++
T Consensus 80 ~i~~~~q~~~~~~~t~~~nl~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~qrv~laral~~ 157 (218)
T cd03290 80 SVAYAAQKPWLLNATVEENITFGS--PFNKQRYKAVTDACSLQPDIDLLPFGDQTEIGERGINLSGGQRQRICVARALYQ 157 (218)
T ss_pred eEEEEcCCCccccccHHHHHhhcC--cCCHHHHHHHHHHhCcHHHHHhCcCccccCcccCCCcCCHHHHHHHHHHHHHhh
Confidence 899999999999999999998752 245667788889999999999999999999998889999999999999999999
Q ss_pred CCCEEEEecccCCCCHHHHHHHHH--HHHHHc-CCceEEEEecCchHHhhcCEEEEEeCCE
Q 000789 1197 NPKILLLDEATSALDAESERVVQD--ALERVM-VNRTTVVVAHRLTTIKNADIIAVVKNGV 1254 (1283)
Q Consensus 1197 ~p~ILiLDEaTSaLD~~te~~I~~--~L~~~~-~~~TvI~IaHrl~ti~~~D~I~vl~~G~ 1254 (1283)
+|++|||||||++||+.+...+.+ .++... .+.|+|++||+++.+..||++++|++|+
T Consensus 158 ~p~illlDEPt~~LD~~~~~~l~~~~ll~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~G~ 218 (218)
T cd03290 158 NTNIVFLDDPFSALDIHLSDHLMQEGILKFLQDDKRTLVLVTHKLQYLPHADWIIAMKDGS 218 (218)
T ss_pred CCCEEEEeCCccccCHHHHHHHHHHHHHHHHhcCCCEEEEEeCChHHHhhCCEEEEecCCC
Confidence 999999999999999999998887 444443 3689999999999998899999999884
No 384
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-40 Score=374.27 Aligned_cols=220 Identities=28% Similarity=0.471 Sum_probs=183.5
Q ss_pred cEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCC--CC---CCceEEECCcccCCC--CH
Q 000789 374 EIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFY--DP---DAGEVLIDGIDIKKL--QL 446 (1283)
Q Consensus 374 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~--~~---~~G~i~~~g~~~~~~--~~ 446 (1283)
.|+++||+++|++ .++|+|+||+|++||+++|+||||||||||+++|+|++ .| ++|+|.++|+++... +.
T Consensus 5 ~l~~~~l~~~~~~---~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~ 81 (252)
T PRK14239 5 ILQVSDLSVYYNK---KKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDT 81 (252)
T ss_pred eEEEEeeEEEECC---eeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccch
Confidence 4899999999963 35999999999999999999999999999999999995 46 599999999998643 34
Q ss_pred HHHhcccEEEccCCCCCcccHHHHHhcCCC--CC-CH----HHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHH
Q 000789 447 KWIREKIGLVSQEPILFATSLRENIAYGKE--NA-TD----QEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQK 519 (1283)
Q Consensus 447 ~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~--~~-~~----~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqk 519 (1283)
..+|+.++||+|++.+|+.|++||+.++.. .. .. +++.++++..++.+ ++.+..+..+.+||||||
T Consensus 82 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~~~~~~~~~~~~LS~G~~ 154 (252)
T PRK14239 82 VDLRKEIGMVFQQPNPFPMSIYENVVYGLRLKGIKDKQVLDEAVEKSLKGASIWD-------EVKDRLHDSALGLSGGQQ 154 (252)
T ss_pred HhhhhcEEEEecCCccCcCcHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCch-------hHHHHHhcCcccCCHHHH
Confidence 567889999999999999999999987531 11 11 12222333333221 122445677789999999
Q ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHH
Q 000789 520 QRIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMTSRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDEL 598 (1283)
Q Consensus 520 qriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l 598 (1283)
||++|||||+.+|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 155 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 234 (252)
T PRK14239 155 QRVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKDDYTMLLVTRSMQQASRISDRTGFFLDGDLIEYNDTKQM 234 (252)
T ss_pred HHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhhCCeEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998767899999999998865 999999999999999999999
Q ss_pred hcCCC
Q 000789 599 IKDPE 603 (1283)
Q Consensus 599 ~~~~~ 603 (1283)
.+.+.
T Consensus 235 ~~~~~ 239 (252)
T PRK14239 235 FMNPK 239 (252)
T ss_pred HhCCC
Confidence 76543
No 385
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.1e-41 Score=376.93 Aligned_cols=213 Identities=30% Similarity=0.480 Sum_probs=183.4
Q ss_pred cEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHHhccc
Q 000789 374 EIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWIREKI 453 (1283)
Q Consensus 374 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 453 (1283)
.|+++||+++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.+
T Consensus 11 ~l~i~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i 87 (265)
T PRK10575 11 TFALRNVSFRVPG---RTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKAFARKV 87 (265)
T ss_pred eEEEeeEEEEECC---EEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEehhhCCHHHHhhhe
Confidence 5899999999963 3699999999999999999999999999999999999999999999999999887777888899
Q ss_pred EEEccCCCCCcc-cHHHHHhcCCCCC----------CHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHH
Q 000789 454 GLVSQEPILFAT-SLRENIAYGKENA----------TDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRI 522 (1283)
Q Consensus 454 ~~v~Q~~~l~~~-ti~~ni~~~~~~~----------~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri 522 (1283)
+|++|++.++.. |+.||+.++.... .++++.++++..++ +........+||||||||+
T Consensus 88 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l-----------~~~~~~~~~~LSgG~~qrv 156 (265)
T PRK10575 88 AYLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGL-----------KPLAHRLVDSLSGGERQRA 156 (265)
T ss_pred EEeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCC-----------HHHhcCCcccCCHHHHHHH
Confidence 999999877665 9999999763210 11233444444444 3334445568999999999
Q ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHHh
Q 000789 523 AIARAILKNPKILLLDEATSALDAESERIVQDALVKIMT--SRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDELI 599 (1283)
Q Consensus 523 aiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~ 599 (1283)
+|||||+.+|++|||||||++||+.+.+.+.+.|.++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 157 ~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~~i~~~~d~i~~l~~G~i~~~~~~~~~~ 236 (265)
T PRK10575 157 WIAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDINMAARYCDYLVALRGGEMIAQGTPAELM 236 (265)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHhc
Confidence 999999999999999999999999999999999998753 6899999999999865 9999999999999999998876
Q ss_pred c
Q 000789 600 K 600 (1283)
Q Consensus 600 ~ 600 (1283)
.
T Consensus 237 ~ 237 (265)
T PRK10575 237 R 237 (265)
T ss_pred C
Confidence 4
No 386
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-40 Score=373.13 Aligned_cols=224 Identities=27% Similarity=0.420 Sum_probs=191.9
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCC-----CcceEEECCccCCCC--Ch
Q 000789 1039 AIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDP-----DSGHVLLDNIELPKF--KL 1111 (1283)
Q Consensus 1039 ~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~-----~~G~I~idG~di~~~--~~ 1111 (1283)
.+.+++++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++... +.
T Consensus 8 ~~~~~~~~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~ 84 (261)
T PRK14263 8 VMDCKLDKIFYGN---FMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFLGQDVYGKGVDP 84 (261)
T ss_pred eEEEEeEEEEeCC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEECCEeccccccch
Confidence 4899999999963 3699999999999999999999999999999999999986 799999999998643 44
Q ss_pred HHHhcceEEEccCCCCChhhHHHHHhcCCC----CCCCHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHH
Q 000789 1112 SWLRQQMGLVSQEPVLFNETIRTNIAYGKQ----GGATEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQR 1187 (1283)
Q Consensus 1112 ~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~----~~~sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQR 1187 (1283)
..+|+.++|+||++.+|..|++||+.++.. .....+++.++++.+++.+.+.. ..++...+||||||||
T Consensus 85 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~-------~~~~~~~~LS~G~~qr 157 (261)
T PRK14263 85 VVVRRYIGMVFQQPNPFSMSIFDNVAFGLRLNRYKGDLGDRVKHALQGAALWDEVKD-------KLKVSGLSLSGGQQQR 157 (261)
T ss_pred HhhhhceEEEecCCccccccHHHHHHHHHhhcCchHHHHHHHHHHHHHcCCchhhhh-------hhhCCcccCCHHHHHH
Confidence 567889999999999999999999987521 01123567778888887655432 2345566899999999
Q ss_pred HHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcCCceEEEEecCchHHhh-cCEEEEEe--------CCEEEEe
Q 000789 1188 IAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKN-ADIIAVVK--------NGVIAEQ 1258 (1283)
Q Consensus 1188 laiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~D~I~vl~--------~G~Ive~ 1258 (1283)
++||||++++|+||||||||++||+.+...+.+.|+++.+++|+|+|||+++.+.. ||+|++|+ +|++++.
T Consensus 158 v~laral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~~d~v~~l~~~~~~~~~~G~i~~~ 237 (261)
T PRK14263 158 LCIARAIATEPEVLLLDEPCSALDPIATRRVEELMVELKKDYTIALVTHNMQQAIRVADTTAFFSVDISQGTRTGYLVEM 237 (261)
T ss_pred HHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEecccccccCCceEEEe
Confidence 99999999999999999999999999999999999998777899999999998866 99999996 8999999
Q ss_pred cChHHHHhccCchh
Q 000789 1259 GSHDALMKITDGAY 1272 (1283)
Q Consensus 1259 Gt~~eLl~~~~g~y 1272 (1283)
|+++++++.+...+
T Consensus 238 g~~~~~~~~~~~~~ 251 (261)
T PRK14263 238 GPTAQIFQNPREQL 251 (261)
T ss_pred CCHHHHHhCCCcHH
Confidence 99999987544333
No 387
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-40 Score=373.95 Aligned_cols=220 Identities=28% Similarity=0.473 Sum_probs=186.9
Q ss_pred cEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCC-----CCCceEEECCcccCC--CCH
Q 000789 374 EIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYD-----PDAGEVLIDGIDIKK--LQL 446 (1283)
Q Consensus 374 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~~~g~~~~~--~~~ 446 (1283)
.|+++||+++|++ .++|+|+||+|++||+++|+||||||||||+++|+|++. |++|+|.++|+++.. .+.
T Consensus 10 ~l~i~~v~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 86 (264)
T PRK14243 10 VLRTENLNVYYGS---FLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHGKNLYAPDVDP 86 (264)
T ss_pred EEEEeeeEEEECC---EEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECCEEccccccCh
Confidence 5899999999963 369999999999999999999999999999999999986 489999999998853 345
Q ss_pred HHHhcccEEEccCCCCCcccHHHHHhcCCCCC--C---HHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHH
Q 000789 447 KWIREKIGLVSQEPILFATSLRENIAYGKENA--T---DQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQR 521 (1283)
Q Consensus 447 ~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~--~---~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqr 521 (1283)
..++++++|++|++.+|+.|++||+.++.... . ++++.++++.+++.+++. ......+.+||||||||
T Consensus 87 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LSgGq~qr 159 (264)
T PRK14243 87 VEVRRRIGMVFQKPNPFPKSIYDNIAYGARINGYKGDMDELVERSLRQAALWDEVK-------DKLKQSGLSLSGGQQQR 159 (264)
T ss_pred HHHhhhEEEEccCCccccccHHHHHHhhhhhcCcchHHHHHHHHHHHHhCchhhHH-------HHhcCCcccCCHHHHHH
Confidence 66788999999999999889999999864211 1 123344445555443332 23456778999999999
Q ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhc-cCEEEEEe---------CCEEeE
Q 000789 522 IAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMTSRTTVVVAHRLTTIRN-ADLIAVVH---------QGKIVE 591 (1283)
Q Consensus 522 iaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~---------~G~i~~ 591 (1283)
++|||||+++|++|||||||++||+.+.+.+.+.|.++.+++|+|++||+++.+.. ||+|++|+ +|+|++
T Consensus 160 v~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tvi~vtH~~~~~~~~~d~v~~l~~~~~~~~~~~g~i~~ 239 (264)
T PRK14243 160 LCIARAIAVQPEVILMDEPCSALDPISTLRIEELMHELKEQYTIIIVTHNMQQAARVSDMTAFFNVELTEGGGRYGYLVE 239 (264)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccccccccCceEEE
Confidence 99999999999999999999999999999999999998777899999999999865 99999998 899999
Q ss_pred ecChhHHhcCCC
Q 000789 592 KGTHDELIKDPE 603 (1283)
Q Consensus 592 ~g~~~~l~~~~~ 603 (1283)
.|+++|+.+.+.
T Consensus 240 ~~~~~~~~~~~~ 251 (264)
T PRK14243 240 FDRTEKIFNSPQ 251 (264)
T ss_pred eCCHHHHHhCCC
Confidence 999999986643
No 388
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-40 Score=377.69 Aligned_cols=215 Identities=29% Similarity=0.478 Sum_probs=183.4
Q ss_pred EEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCC--CChHHHhcc
Q 000789 1040 IELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPK--FKLSWLRQQ 1117 (1283)
Q Consensus 1040 I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~--~~~~~lR~~ 1117 (1283)
|+++||+++|+. ..++++|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++.. .+...+|+.
T Consensus 2 l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (275)
T PRK13639 2 LETRDLKYSYPD--GTEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPTSGEVLIKGEPIKYDKKSLLEVRKT 79 (275)
T ss_pred EEEEEEEEEeCC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEECccccchHHHHHhh
Confidence 789999999973 2359999999999999999999999999999999999999999999999999852 234567899
Q ss_pred eEEEccCC--CCChhhHHHHHhcCCC-CCCCH----HHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHH
Q 000789 1118 MGLVSQEP--VLFNETIRTNIAYGKQ-GGATE----EEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAI 1190 (1283)
Q Consensus 1118 i~~V~Qdp--~Lf~gTIreNl~~g~~-~~~sd----~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlai 1190 (1283)
|+|+||+| .+|..|++||+.++.. ...+. +++.++++..++.++.. . ....||||||||++|
T Consensus 80 i~~v~q~~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~-------~----~~~~LS~Gq~qrv~l 148 (275)
T PRK13639 80 VGIVFQNPDDQLFAPTVEEDVAFGPLNLGLSKEEVEKRVKEALKAVGMEGFEN-------K----PPHHLSGGQKKRVAI 148 (275)
T ss_pred eEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCchhhc-------C----ChhhCCHHHHHHHHH
Confidence 99999998 5788999999986521 11222 34556666666654322 2 234799999999999
Q ss_pred HHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHHHhc
Q 000789 1191 ARAVLKNPKILLLDEATSALDAESERVVQDALERVM-VNRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDALMKI 1267 (1283)
Q Consensus 1191 ARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl~~ 1267 (1283)
|||++++|++|||||||++||+.+...+.+.|+++. +++|+|+|||+++.+.. ||+|++|++|++++.|+++++++.
T Consensus 149 aral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 227 (275)
T PRK13639 149 AGILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVDLVPVYADKVYVMSDGKIIKEGTPKEVFSD 227 (275)
T ss_pred HHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 999999999999999999999999999999999875 47899999999999875 999999999999999999998763
No 389
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-40 Score=375.46 Aligned_cols=220 Identities=30% Similarity=0.485 Sum_probs=186.4
Q ss_pred cccEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCC-----CCCceEEECCcccCC--C
Q 000789 372 EGEIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYD-----PDAGEVLIDGIDIKK--L 444 (1283)
Q Consensus 372 ~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~~~g~~~~~--~ 444 (1283)
...|+++||+++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++ |++|+|.+||+++.. .
T Consensus 18 ~~~l~~~nl~~~~~~---~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~ 94 (267)
T PRK14237 18 EIALSTKDLHVYYGK---KEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEI 94 (267)
T ss_pred CeEEEEeeEEEEECC---eeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccC
Confidence 346999999999963 469999999999999999999999999999999999997 589999999999864 3
Q ss_pred CHHHHhcccEEEccCCCCCcccHHHHHhcCCCC--C-CH----HHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChH
Q 000789 445 QLKWIREKIGLVSQEPILFATSLRENIAYGKEN--A-TD----QEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGG 517 (1283)
Q Consensus 445 ~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~--~-~~----~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgG 517 (1283)
+...+|+.|+||+|++.+|+.|++||+.++... . .. +++.++++..++.++ +++..+..+.+||||
T Consensus 95 ~~~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------i~~~~~~~~~~LS~G 167 (267)
T PRK14237 95 NVYEMRKHIGMVFQRPNPFAKSIYENITFALERAGVKDKKVLDEIVETSLKQAALWDQ-------VKDDLHKSALTLSGG 167 (267)
T ss_pred ChHHHhcceEEEecCCccccccHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCch-------hhhhhcCCcccCCHH
Confidence 455678899999999999989999999885321 1 11 222333333333222 234566778899999
Q ss_pred HHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChh
Q 000789 518 QKQRIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMTSRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHD 596 (1283)
Q Consensus 518 qkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~ 596 (1283)
||||++|||||+++|++|||||||++||+.+.+.+.+.|+++.++.|+|++||+++.+.. ||+|++|++|++++.|+++
T Consensus 168 ~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 247 (267)
T PRK14237 168 QQQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELKKNYTIIIVTHNMQQAARASDYTAFFYLGDLIEYDKTR 247 (267)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhcCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999999998777899999999999865 9999999999999999999
Q ss_pred HHhcC
Q 000789 597 ELIKD 601 (1283)
Q Consensus 597 ~l~~~ 601 (1283)
++...
T Consensus 248 ~~~~~ 252 (267)
T PRK14237 248 NIFTN 252 (267)
T ss_pred HHhcC
Confidence 98765
No 390
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.5e-41 Score=372.60 Aligned_cols=218 Identities=22% Similarity=0.416 Sum_probs=183.1
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHH-Hhcc
Q 000789 1039 AIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSW-LRQQ 1117 (1283)
Q Consensus 1039 ~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~-lR~~ 1117 (1283)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... +|+.
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (241)
T PRK10895 3 TLTAKNLAKAYKG---RRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDEDISLLPLHARARRG 79 (241)
T ss_pred eEEEeCcEEEeCC---EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHHhC
Confidence 3889999999974 36999999999999999999999999999999999999999999999999998777544 5789
Q ss_pred eEEEccCCCCCh-hhHHHHHhcCCC--CCCCHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHHHHH
Q 000789 1118 MGLVSQEPVLFN-ETIRTNIAYGKQ--GGATEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAV 1194 (1283)
Q Consensus 1118 i~~V~Qdp~Lf~-gTIreNl~~g~~--~~~sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiARAl 1194 (1283)
++|+||++.+|. .|++||+.+... ...+.++.. ..+.++++.+ |++.........||||||||++||||+
T Consensus 80 i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~laral 152 (241)
T PRK10895 80 IGYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQRE-----DRANELMEEF--HIEHLRDSMGQSLSGGERRRVEIARAL 152 (241)
T ss_pred eEEeccCCcccccCcHHHHHhhhhhcccccCHHHHH-----HHHHHHHHHc--CCHHHhhcchhhCCHHHHHHHHHHHHH
Confidence 999999999887 599999986421 112222211 1223344444 444444555678999999999999999
Q ss_pred ccCCCEEEEecccCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHHHh
Q 000789 1195 LKNPKILLLDEATSALDAESERVVQDALERVM-VNRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDALMK 1266 (1283)
Q Consensus 1195 l~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl~ 1266 (1283)
+++|++|||||||++||+.+...+.+.++++. .++|+|++||+++.+.. ||++++|++|++++.|++++++.
T Consensus 153 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 226 (241)
T PRK10895 153 AANPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQ 226 (241)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEeCCeEEeeCCHHHHhc
Confidence 99999999999999999999999999998865 47899999999987765 99999999999999999999875
No 391
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-40 Score=377.63 Aligned_cols=220 Identities=31% Similarity=0.545 Sum_probs=186.4
Q ss_pred cEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCC---ceEEECCcccCCCCHHHHh
Q 000789 374 EIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDA---GEVLIDGIDIKKLQLKWIR 450 (1283)
Q Consensus 374 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~---G~i~~~g~~~~~~~~~~~r 450 (1283)
.|+++|++|+|++. ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++ |+|.++|.++...+...++
T Consensus 5 ~l~i~~l~~~~~~~-~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~~ 83 (282)
T PRK13640 5 IVEFKHVSFTYPDS-KKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDIR 83 (282)
T ss_pred eEEEEEEEEEcCCC-CccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHHH
Confidence 58999999999642 2469999999999999999999999999999999999999998 8999999999877777778
Q ss_pred cccEEEccCCC--CCcccHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHH
Q 000789 451 EKIGLVSQEPI--LFATSLRENIAYGKEN--ATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIAR 526 (1283)
Q Consensus 451 ~~i~~v~Q~~~--l~~~ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiAR 526 (1283)
++||||+|++. +++.|+.|||.++.+. .+.++..+ .+.+.++.+ |++........+||||||||++|||
T Consensus 84 ~~ig~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~-----~~~~~l~~~--~L~~~~~~~~~~LS~G~~qrv~lar 156 (282)
T PRK13640 84 EKVGIVFQNPDNQFVGATVGDDVAFGLENRAVPRPEMIK-----IVRDVLADV--GMLDYIDSEPANLSGGQKQRVAIAG 156 (282)
T ss_pred hheEEEEECHHHhhccCCHHHHHHhhHHhCCCCHHHHHH-----HHHHHHHHC--CChhHhcCCcccCCHHHHHHHHHHH
Confidence 89999999984 5678999999986332 22322211 112233333 4444555666799999999999999
Q ss_pred HHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhccCEEEEEeCCEEeEecChhHHhcC
Q 000789 527 AILKNPKILLLDEATSALDAESERIVQDALVKIMT--SRTTVVVAHRLTTIRNADLIAVVHQGKIVEKGTHDELIKD 601 (1283)
Q Consensus 527 al~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~~~l~~~ 601 (1283)
||+.+|++|||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+..||+|++|++|++++.|+++++...
T Consensus 157 al~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 233 (282)
T PRK13640 157 ILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDIDEANMADQVLVLDDGKLLAQGSPVEIFSK 233 (282)
T ss_pred HHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 99999999999999999999999999999998753 6899999999999988999999999999999999988754
No 392
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-40 Score=374.24 Aligned_cols=226 Identities=28% Similarity=0.453 Sum_probs=186.4
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCC-----cceEEECCccCCC--CCh
Q 000789 1039 AIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPD-----SGHVLLDNIELPK--FKL 1111 (1283)
Q Consensus 1039 ~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~-----~G~I~idG~di~~--~~~ 1111 (1283)
-|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|.+||.++.. .+.
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~ 80 (252)
T PRK14272 4 LLSAQDVNIYYGD---KQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDP 80 (252)
T ss_pred EEEEeeeEEEECC---EEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCH
Confidence 3889999999973 46999999999999999999999999999999999999874 8999999999865 344
Q ss_pred HHHhcceEEEccCCCCCh-hhHHHHHhcCCC-CCC-CHHHHHH----HHHHhChHHHHHhCCCCcccccCCCCCCCChhH
Q 000789 1112 SWLRQQMGLVSQEPVLFN-ETIRTNIAYGKQ-GGA-TEEEIIA----ATEASNAHNFISALPHGYETNVGERGVQLSGGQ 1184 (1283)
Q Consensus 1112 ~~lR~~i~~V~Qdp~Lf~-gTIreNl~~g~~-~~~-sd~ei~~----al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQ 1184 (1283)
..+|+.++|+||++.+|. .|++||+.++.. ... .+++..+ .++..++++.+ +..+++. ..+|||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l---~~~~~~~----~~~LS~G~ 153 (252)
T PRK14272 81 VAMRRRVGMVFQKPNPFPTMSVFDNVVAGLKLAGIRDRDHLMEVAERSLRGAALWDEV---KDRLKTP----ATGLSGGQ 153 (252)
T ss_pred HHhhceeEEEeccCccCcCCCHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCcchhh---hhhhcCC----cccCCHHH
Confidence 577889999999999887 599999975421 111 2333332 23334433322 2233443 45899999
Q ss_pred HHHHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcCCceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHH
Q 000789 1185 KQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDA 1263 (1283)
Q Consensus 1185 rQRlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~e 1263 (1283)
|||++||||++++|+||||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|++++
T Consensus 154 ~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 233 (252)
T PRK14272 154 QQRLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKKVTTIIIVTHNMHQAARVSDTTSFFLVGDLVEHGPTDQ 233 (252)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999988777999999999999986 99999999999999999999
Q ss_pred HHhccCchhHH
Q 000789 1264 LMKITDGAYAS 1274 (1283)
Q Consensus 1264 Ll~~~~g~y~~ 1274 (1283)
++..+...+.+
T Consensus 234 ~~~~~~~~~~~ 244 (252)
T PRK14272 234 LFTNPRDERTE 244 (252)
T ss_pred HHhCcCcHHHH
Confidence 98764444433
No 393
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-40 Score=379.09 Aligned_cols=223 Identities=28% Similarity=0.496 Sum_probs=184.9
Q ss_pred cccEEEEEEEEECCCCC--CCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCC----C-
Q 000789 372 EGEIELRDVYFRYPARP--EVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKK----L- 444 (1283)
Q Consensus 372 ~~~i~~~~v~f~y~~~~--~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~----~- 444 (1283)
.+.|+++|++++|++.. ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. .
T Consensus 4 ~~~l~i~nl~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~ 83 (289)
T PRK13645 4 SKDIILDNVSYTYAKKTPFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISETGQTIVGDYAIPANLKKIK 83 (289)
T ss_pred cceEEEEEEEEEeCCCCccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEccccccccc
Confidence 35799999999997432 1359999999999999999999999999999999999999999999999998852 1
Q ss_pred CHHHHhcccEEEccCC--CCCcccHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHHhCCCCcc-ccccCCCCCCChHHH
Q 000789 445 QLKWIREKIGLVSQEP--ILFATSLRENIAYGKEN--ATDQEIRTAIELANAAKFIDKLPKGLD-TMAGEHGTQLSGGQK 519 (1283)
Q Consensus 445 ~~~~~r~~i~~v~Q~~--~l~~~ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~lp~g~~-t~~~~~g~~LSgGqk 519 (1283)
+...+|+.|+||+|++ .+|..|++||+.++... ...++..+. +.+.++.+ |+. ......+.+||||||
T Consensus 84 ~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~-----~~~ll~~~--~L~~~~~~~~~~~LS~Gq~ 156 (289)
T PRK13645 84 EVKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNLGENKQEAYKK-----VPELLKLV--QLPEDYVKRSPFELSGGQK 156 (289)
T ss_pred cHHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHc--CCChhHhcCChhhCCHHHH
Confidence 3456788999999998 46778999999886321 222222221 12333333 442 345667789999999
Q ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChh
Q 000789 520 QRIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMT--SRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHD 596 (1283)
Q Consensus 520 qriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~ 596 (1283)
||++|||||+.+|++|||||||++||+.+.+.+.+.|+++.+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++
T Consensus 157 qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 236 (289)
T PRK13645 157 RRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMDQVLRIADEVIVMHEGKVISIGSPF 236 (289)
T ss_pred HHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999998753 6899999999999865 9999999999999999999
Q ss_pred HHhcC
Q 000789 597 ELIKD 601 (1283)
Q Consensus 597 ~l~~~ 601 (1283)
++...
T Consensus 237 ~~~~~ 241 (289)
T PRK13645 237 EIFSN 241 (289)
T ss_pred HHhcC
Confidence 88654
No 394
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=8e-41 Score=367.61 Aligned_cols=209 Identities=31% Similarity=0.537 Sum_probs=176.1
Q ss_pred EEEEEEEEECCCCC-CCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHH---Hh
Q 000789 375 IELRDVYFRYPARP-EVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKW---IR 450 (1283)
Q Consensus 375 i~~~~v~f~y~~~~-~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~---~r 450 (1283)
|+++||+++|++.. ..++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+... +|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (221)
T TIGR02211 2 LKCENLGKRYQEGKLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPTSGEVLFNGQSLSKLSSNERAKLR 81 (221)
T ss_pred EEEEeeeEEccCCCcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcCHhHHHHHH
Confidence 68999999996421 246999999999999999999999999999999999999999999999999998776543 33
Q ss_pred -cccEEEccCCCCCc-ccHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHH
Q 000789 451 -EKIGLVSQEPILFA-TSLRENIAYGKE--NATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIAR 526 (1283)
Q Consensus 451 -~~i~~v~Q~~~l~~-~ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiAR 526 (1283)
+.++||+|++.+|+ .|++||+.++.. .....+..+ .+.++++.+ |++......+..||||||||++|||
T Consensus 82 ~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~lar 154 (221)
T TIGR02211 82 NKKLGFIYQFHHLLPDFTALENVAMPLLIGKKSVKEAKE-----RAYEMLEKV--GLEHRINHRPSELSGGERQRVAIAR 154 (221)
T ss_pred HhcEEEEecccccCCCCcHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CChhhhhCChhhCCHHHHHHHHHHH
Confidence 67999999999886 599999987421 111111111 123455555 6766667777899999999999999
Q ss_pred HHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhccCEEEEEeCCEEe
Q 000789 527 AILKNPKILLLDEATSALDAESERIVQDALVKIMT--SRTTVVVAHRLTTIRNADLIAVVHQGKIV 590 (1283)
Q Consensus 527 al~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~~d~i~vl~~G~i~ 590 (1283)
||+.+|++|||||||++||+++.+.+.+.|.++.+ ++|+|++||+++.+..+|+|++|++|+++
T Consensus 155 al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~d~v~~l~~G~i~ 220 (221)
T TIGR02211 155 ALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLELAKKLDRVLEMKDGQLF 220 (221)
T ss_pred HHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhhcCEEEEEeCCEec
Confidence 99999999999999999999999999999998753 68999999999999889999999999986
No 395
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=1.4e-40 Score=367.43 Aligned_cols=209 Identities=30% Similarity=0.401 Sum_probs=178.4
Q ss_pred cEEEEEEEEECCCCCC-cccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHH---H
Q 000789 1039 AIELRCVSFKYPTRPD-VQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSW---L 1114 (1283)
Q Consensus 1039 ~I~~~nVsf~Y~~~~~-~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~---l 1114 (1283)
.|+++||+++|++... .++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.+||.++.+.+... +
T Consensus 6 ~l~~~~l~~~~~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 85 (228)
T PRK10584 6 IVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGSSGEVSLVGQPLHQMDEEARAKL 85 (228)
T ss_pred eEEEeeeEEEccCCCcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCeeEEECCEEcccCCHHHHHHH
Confidence 4899999999974311 35999999999999999999999999999999999999999999999999998877543 3
Q ss_pred -hcceEEEccCCCCCh-hhHHHHHhcCCC-CCC----CHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHH
Q 000789 1115 -RQQMGLVSQEPVLFN-ETIRTNIAYGKQ-GGA----TEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQR 1187 (1283)
Q Consensus 1115 -R~~i~~V~Qdp~Lf~-gTIreNl~~g~~-~~~----sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQR 1187 (1283)
++.++|+||+|.+|. .|++||+.++.. ... ..+++.++++..++.+++...| ..||||||||
T Consensus 86 ~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~Ge~qr 154 (228)
T PRK10584 86 RAKHVGFVFQSFMLIPTLNALENVELPALLRGESSRQSRNGAKALLEQLGLGKRLDHLP-----------AQLSGGEQQR 154 (228)
T ss_pred HhheEEEEEcccccCCCcCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCCh-----------hhCCHHHHHH
Confidence 368999999999887 499999975311 111 1345667777777766554433 4799999999
Q ss_pred HHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchHHhhcCEEEEEeCCEEEEe
Q 000789 1188 IAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMV--NRTTVVVAHRLTTIKNADIIAVVKNGVIAEQ 1258 (1283)
Q Consensus 1188 laiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~~D~I~vl~~G~Ive~ 1258 (1283)
++|||||+++|++|||||||++||+.+.+.+.+.|+++.+ ++|+|+|||+++.+..||++++|++|+++|.
T Consensus 155 l~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~g~i~~~ 227 (228)
T PRK10584 155 VALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQLAARCDRRLRLVNGQLQEE 227 (228)
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEec
Confidence 9999999999999999999999999999999999998743 6899999999999988999999999999874
No 396
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=1.1e-40 Score=374.54 Aligned_cols=219 Identities=34% Similarity=0.566 Sum_probs=185.8
Q ss_pred ccEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCC--------
Q 000789 373 GEIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKL-------- 444 (1283)
Q Consensus 373 ~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~-------- 444 (1283)
+.|+++||++.|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...
T Consensus 4 ~~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (257)
T PRK10619 4 NKLNVIDLHKRYGE---HEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQLK 80 (257)
T ss_pred ccEEEeeeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccccccccccc
Confidence 46999999999963 3699999999999999999999999999999999999999999999999988542
Q ss_pred -----CHHHHhcccEEEccCCCCCcc-cHHHHHhcCCC---CCCHHHHHHHHHHhcHHHHHHhCCCCccccc-cCCCCCC
Q 000789 445 -----QLKWIREKIGLVSQEPILFAT-SLRENIAYGKE---NATDQEIRTAIELANAAKFIDKLPKGLDTMA-GEHGTQL 514 (1283)
Q Consensus 445 -----~~~~~r~~i~~v~Q~~~l~~~-ti~~ni~~~~~---~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~-~~~g~~L 514 (1283)
....++++++||+|++.+|+. |++||+.++.. .....+.. ..+.+.++.+ |+.... ......|
T Consensus 81 ~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~~~~~~~~~-----~~~~~~l~~~--gl~~~~~~~~~~~L 153 (257)
T PRK10619 81 VADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKQEAR-----ERAVKYLAKV--GIDERAQGKYPVHL 153 (257)
T ss_pred cccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhCCCCHHHHH-----HHHHHHHHHc--CCChhhhhCCcccC
Confidence 134567899999999999975 99999986421 11221111 1223455555 666554 6677899
Q ss_pred ChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC-CCeEEEEecCchhhhc-cCEEEEEeCCEEeEe
Q 000789 515 SGGQKQRIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMT-SRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEK 592 (1283)
Q Consensus 515 SgGqkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~-~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~ 592 (1283)
|||||||++|||||+++|++|||||||++||+.+.+.+.+.|+++.+ ++|+|+|||+++.+.. ||+|++|++|++++.
T Consensus 154 S~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~ 233 (257)
T PRK10619 154 SGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLHQGKIEEE 233 (257)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEe
Confidence 99999999999999999999999999999999999999999998854 7899999999999986 999999999999999
Q ss_pred cChhHHhcC
Q 000789 593 GTHDELIKD 601 (1283)
Q Consensus 593 g~~~~l~~~ 601 (1283)
|+++++...
T Consensus 234 ~~~~~~~~~ 242 (257)
T PRK10619 234 GAPEQLFGN 242 (257)
T ss_pred CCHHHhhhC
Confidence 999998754
No 397
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-40 Score=371.22 Aligned_cols=218 Identities=27% Similarity=0.457 Sum_probs=187.8
Q ss_pred cEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHH-Hhcc
Q 000789 374 EIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKW-IREK 452 (1283)
Q Consensus 374 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~-~r~~ 452 (1283)
.|+++||+++|++ +++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|.++...+... .|+.
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (241)
T PRK10895 3 TLTAKNLAKAYKG---RRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDEDISLLPLHARARRG 79 (241)
T ss_pred eEEEeCcEEEeCC---EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHHhC
Confidence 3889999999963 36999999999999999999999999999999999999999999999999998776543 5778
Q ss_pred cEEEccCCCCCcc-cHHHHHhcCCCC---CCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHH
Q 000789 453 IGLVSQEPILFAT-SLRENIAYGKEN---ATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARAI 528 (1283)
Q Consensus 453 i~~v~Q~~~l~~~-ti~~ni~~~~~~---~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARal 528 (1283)
++|++|++.+|.. |++||+.++... .+.++ ....++++++.+ |++.........||||||||++|||||
T Consensus 80 i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~-----~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~laral 152 (241)
T PRK10895 80 IGYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQ-----REDRANELMEEF--HIEHLRDSMGQSLSGGERRRVEIARAL 152 (241)
T ss_pred eEEeccCCcccccCcHHHHHhhhhhcccccCHHH-----HHHHHHHHHHHc--CCHHHhhcchhhCCHHHHHHHHHHHHH
Confidence 9999999998875 999999875321 11221 112334566666 777777778889999999999999999
Q ss_pred hcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC-CCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHHhcC
Q 000789 529 LKNPKILLLDEATSALDAESERIVQDALVKIMT-SRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDELIKD 601 (1283)
Q Consensus 529 ~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~-~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~ 601 (1283)
+.+|++|||||||++||+.+.+.+.+.+.++.+ ++|+|++||+++.+.. ||++++|++|++++.|++++++..
T Consensus 153 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~ 227 (241)
T PRK10895 153 AANPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQD 227 (241)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEeCCeEEeeCCHHHHhcC
Confidence 999999999999999999999999999988754 7899999999988765 999999999999999999988653
No 398
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-40 Score=371.70 Aligned_cols=219 Identities=29% Similarity=0.513 Sum_probs=185.4
Q ss_pred cEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCC-----CceEEECCcccCCC--CH
Q 000789 374 EIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPD-----AGEVLIDGIDIKKL--QL 446 (1283)
Q Consensus 374 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~-----~G~i~~~g~~~~~~--~~ 446 (1283)
.|+++|++|+|++ +++|+|+||+|++|++++|+||||||||||+++|+|+++|+ +|+|.++|.++... +.
T Consensus 4 ~l~~~~l~~~~~~---~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~ 80 (251)
T PRK14249 4 KIKIRGVNFFYHK---HQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLDV 80 (251)
T ss_pred eEEEEEEEEEECC---eeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccccCh
Confidence 5899999999963 35999999999999999999999999999999999999997 69999999988643 44
Q ss_pred HHHhcccEEEccCCCCCcccHHHHHhcCCCC--CC-HHH----HHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHH
Q 000789 447 KWIREKIGLVSQEPILFATSLRENIAYGKEN--AT-DQE----IRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQK 519 (1283)
Q Consensus 447 ~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~--~~-~~~----~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqk 519 (1283)
..+|+.++||+|++.+|+.|++||+.++... .. .++ +.++++..++.+ ++.+.....+.+||||||
T Consensus 81 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~l~~~~~~~~~~LS~Gq~ 153 (251)
T PRK14249 81 VNLRKRVGMVFQQPNPFPKSIFDNVAFGPRMLGTTAQSRLDEVVEKSLRQAALWD-------EVKDNLHKSGLALSGGQQ 153 (251)
T ss_pred HHhhceEEEEecCCccCcCcHHHHHhhHHHhcCCChhhHHHHHHHHHHHHhCCch-------hhhhHhhCCcccCCHHHH
Confidence 5678899999999999999999999886321 11 111 222233333222 223446677889999999
Q ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHH
Q 000789 520 QRIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMTSRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDEL 598 (1283)
Q Consensus 520 qriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l 598 (1283)
||++|||||+.+|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 154 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tilivsh~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 233 (251)
T PRK14249 154 QRLCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELKQNYTIAIVTHNMQQAARASDWTGFLLTGDLVEYGRTGEI 233 (251)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhCCEEEEEeCCeEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988667899999999999876 899999999999999999998
Q ss_pred hcCC
Q 000789 599 IKDP 602 (1283)
Q Consensus 599 ~~~~ 602 (1283)
...+
T Consensus 234 ~~~~ 237 (251)
T PRK14249 234 FSRP 237 (251)
T ss_pred HhCC
Confidence 7653
No 399
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-40 Score=371.66 Aligned_cols=228 Identities=26% Similarity=0.437 Sum_probs=190.1
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECC------ccCCCCChH
Q 000789 1039 AIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDN------IELPKFKLS 1112 (1283)
Q Consensus 1039 ~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG------~di~~~~~~ 1112 (1283)
.|+++|++++|++ .++|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.++| .++.+.+..
T Consensus 10 ~i~~~~~~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~iaG~~~~~~G~v~~~G~~~~~g~~~~~~~~~ 86 (257)
T PRK14246 10 VFNISRLYLYIND---KAILKDITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIEIYDSKIKVDGKVLYFGKDIFQIDAI 86 (257)
T ss_pred heeeeeEEEecCC---ceeEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCcCceeEcCEEEECCcccccCCHH
Confidence 5999999999974 3589999999999999999999999999999999999999986666554 677777777
Q ss_pred HHhcceEEEccCCCCChh-hHHHHHhcCCC-CCC-CHHH----HHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHH
Q 000789 1113 WLRQQMGLVSQEPVLFNE-TIRTNIAYGKQ-GGA-TEEE----IIAATEASNAHNFISALPHGYETNVGERGVQLSGGQK 1185 (1283)
Q Consensus 1113 ~lR~~i~~V~Qdp~Lf~g-TIreNl~~g~~-~~~-sd~e----i~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQr 1185 (1283)
.+|+.++|+||+|.+|.+ |++||+.++.. ... .+++ +.++++..++.+++. ......+..||||||
T Consensus 87 ~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-------~~~~~~~~~LS~G~~ 159 (257)
T PRK14246 87 KLRKEVGMVFQQPNPFPHLSIYDNIAYPLKSHGIKEKREIKKIVEECLRKVGLWKEVY-------DRLNSPASQLSGGQQ 159 (257)
T ss_pred HHhcceEEEccCCccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCCccch-------hhhcCCcccCCHHHH
Confidence 889999999999999875 99999986421 111 2333 345555555543321 123345568999999
Q ss_pred HHHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcCCceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHH
Q 000789 1186 QRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDAL 1264 (1283)
Q Consensus 1186 QRlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eL 1264 (1283)
||++||||++++|++|||||||++||+.+++.+.+.|+++.+++|+|+|||+++.+.. ||++++|++|++++.|+++++
T Consensus 160 qrl~laral~~~P~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiilvsh~~~~~~~~~d~v~~l~~g~i~~~g~~~~~ 239 (257)
T PRK14246 160 QRLTIARALALKPKVLLMDEPTSMIDIVNSQAIEKLITELKNEIAIVIVSHNPQQVARVADYVAFLYNGELVEWGSSNEI 239 (257)
T ss_pred HHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCcEEEEEECCHHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 9999999999999999999999999999999999999988778999999999999954 999999999999999999999
Q ss_pred HhccCchhHHHH
Q 000789 1265 MKITDGAYASLV 1276 (1283)
Q Consensus 1265 l~~~~g~y~~L~ 1276 (1283)
.+.+...|.+.+
T Consensus 240 ~~~~~~~~~~~~ 251 (257)
T PRK14246 240 FTSPKNELTEKY 251 (257)
T ss_pred HhCCCcHHHHHH
Confidence 876555565443
No 400
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-40 Score=366.47 Aligned_cols=210 Identities=33% Similarity=0.491 Sum_probs=184.3
Q ss_pred EEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHhcceE
Q 000789 1040 IELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMG 1119 (1283)
Q Consensus 1040 I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~ 1119 (1283)
|+++||+++|+.. ..|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+. .++.++
T Consensus 2 l~~~~l~~~~~~~-----~~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~--~~~~i~ 74 (232)
T PRK10771 2 LKLTDITWLYHHL-----PMRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPASGSLTLNGQDHTTTPP--SRRPVS 74 (232)
T ss_pred eEEEEEEEEECCc-----cceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCeecCcCCh--hhccEE
Confidence 7899999999732 239999999999999999999999999999999999999999999999876543 367899
Q ss_pred EEccCCCCChh-hHHHHHhcCCCCC-----CCHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHHHH
Q 000789 1120 LVSQEPVLFNE-TIRTNIAYGKQGG-----ATEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARA 1193 (1283)
Q Consensus 1120 ~V~Qdp~Lf~g-TIreNl~~g~~~~-----~sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiARA 1193 (1283)
|+||++.+|.+ |++||+.++.... ..++++.++++..++.+++.+.| ..||||||||++||||
T Consensus 75 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~lara 143 (232)
T PRK10771 75 MLFQENNLFSHLTVAQNIGLGLNPGLKLNAAQREKLHAIARQMGIEDLLARLP-----------GQLSGGQRQRVALARC 143 (232)
T ss_pred EEecccccccCCcHHHHHhcccccccCCCHHHHHHHHHHHHHcCcHHHHhCCc-----------ccCCHHHHHHHHHHHH
Confidence 99999999975 9999998642111 12456788888888877766655 3799999999999999
Q ss_pred HccCCCEEEEecccCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHHHhc
Q 000789 1194 VLKNPKILLLDEATSALDAESERVVQDALERVMV--NRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDALMKI 1267 (1283)
Q Consensus 1194 ll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl~~ 1267 (1283)
++++|++|||||||++||+++.+.+.+.|+++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 144 l~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~g~~~~~~~~ 220 (232)
T PRK10771 144 LVREQPILLLDEPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSLEDAARIAPRSLVVADGRIAWDGPTDELLSG 220 (232)
T ss_pred HhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhC
Confidence 9999999999999999999999999999998753 7899999999999866 999999999999999999999864
No 401
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=1.1e-40 Score=381.71 Aligned_cols=213 Identities=22% Similarity=0.410 Sum_probs=184.0
Q ss_pred EEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHhcceE
Q 000789 1040 IELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMG 1119 (1283)
Q Consensus 1040 I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~ 1119 (1283)
++++|++++|++ ..+|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++.+ +...+|++++
T Consensus 3 l~~~~l~~~~~~---~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~~G~i~i~g~~~~~-~~~~~~~~ig 78 (301)
T TIGR03522 3 IRVSSLTKLYGT---QNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPDSGSVQVCGEDVLQ-NPKEVQRNIG 78 (301)
T ss_pred EEEEEEEEEECC---EEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-ChHHHHhceE
Confidence 889999999963 469999999999999999999999999999999999999999999999999876 4457889999
Q ss_pred EEccCCCCChh-hHHHHHhcCCC-CCCCH----HHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHHHH
Q 000789 1120 LVSQEPVLFNE-TIRTNIAYGKQ-GGATE----EEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARA 1193 (1283)
Q Consensus 1120 ~V~Qdp~Lf~g-TIreNl~~g~~-~~~sd----~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiARA 1193 (1283)
|+||+|.+|.. |++||+.+... ...+. +++.++++..++. .........||||||||++||||
T Consensus 79 ~~~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~-----------~~~~~~~~~LS~G~~qrv~la~a 147 (301)
T TIGR03522 79 YLPEHNPLYLDMYVREYLQFIAGIYGMKGQLLKQRVEEMIELVGLR-----------PEQHKKIGQLSKGYRQRVGLAQA 147 (301)
T ss_pred EecCCCCCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCc-----------hHhcCchhhCCHHHHHHHHHHHH
Confidence 99999999865 99999975311 11222 3344444444443 33344456899999999999999
Q ss_pred HccCCCEEEEecccCCCCHHHHHHHHHHHHHHcCCceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHHHhc
Q 000789 1194 VLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDALMKI 1267 (1283)
Q Consensus 1194 ll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl~~ 1267 (1283)
|+.+|++|||||||++||+.+.+.+++.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 148 l~~~p~lliLDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sH~l~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 222 (301)
T TIGR03522 148 LIHDPKVLILDEPTTGLDPNQLVEIRNVIKNIGKDKTIILSTHIMQEVEAICDRVIIINKGKIVADKKLDELSAA 222 (301)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHHh
Confidence 99999999999999999999999999999998778999999999999877 999999999999999999999764
No 402
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=1.2e-40 Score=384.79 Aligned_cols=214 Identities=29% Similarity=0.471 Sum_probs=182.8
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHhcce
Q 000789 1039 AIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQM 1118 (1283)
Q Consensus 1039 ~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i 1118 (1283)
.|+++||+++|++ ..+|+||||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.+.+ ..+|+.|
T Consensus 41 ~i~i~nl~k~y~~---~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~~G~i~i~G~~~~~~~-~~~~~~i 116 (340)
T PRK13536 41 AIDLAGVSKSYGD---KAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPDAGKITVLGVPVPARA-RLARARI 116 (340)
T ss_pred eEEEEEEEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCceEEEECCEECCcch-HHHhccE
Confidence 5999999999974 35999999999999999999999999999999999999999999999999987654 5678999
Q ss_pred EEEccCCCCC-hhhHHHHHhcC-CCCCCCHHH----HHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHHH
Q 000789 1119 GLVSQEPVLF-NETIRTNIAYG-KQGGATEEE----IIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIAR 1192 (1283)
Q Consensus 1119 ~~V~Qdp~Lf-~gTIreNl~~g-~~~~~sd~e----i~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiAR 1192 (1283)
+||||++.+| ..|++||+.+. .....+.++ +.++++..+ +++..++.++ +||||||||++|||
T Consensus 117 g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~-------L~~~~~~~~~----~LS~G~kqrv~lA~ 185 (340)
T PRK13536 117 GVVPQFDNLDLEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFAR-------LESKADARVS----DLSGGMKRRLTLAR 185 (340)
T ss_pred EEEeCCccCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcC-------CchhhCCChh----hCCHHHHHHHHHHH
Confidence 9999999886 67999999742 111223232 223333333 3444555554 79999999999999
Q ss_pred HHccCCCEEEEecccCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHHHhc
Q 000789 1193 AVLKNPKILLLDEATSALDAESERVVQDALERVM-VNRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDALMKI 1267 (1283)
Q Consensus 1193 All~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl~~ 1267 (1283)
||+.+|++|||||||++||+.+...+++.|+++. +++|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 186 aL~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 262 (340)
T PRK13536 186 ALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLEAGRKIAEGRPHALIDE 262 (340)
T ss_pred HHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhh
Confidence 9999999999999999999999999999999875 47899999999999976 999999999999999999999764
No 403
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-40 Score=375.36 Aligned_cols=221 Identities=26% Similarity=0.455 Sum_probs=185.6
Q ss_pred cEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCC-----CCCceEEECCcccCC--CCH
Q 000789 374 EIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYD-----PDAGEVLIDGIDIKK--LQL 446 (1283)
Q Consensus 374 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~~~g~~~~~--~~~ 446 (1283)
.|+++|++++|++ .++|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|+++.. .+.
T Consensus 24 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 100 (271)
T PRK14238 24 VFDTQNLNLWYGE---DHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRDQNIFDKSYSV 100 (271)
T ss_pred EEEEeeeEEEECC---cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECCEEcccccccH
Confidence 5999999999963 359999999999999999999999999999999999987 699999999999853 345
Q ss_pred HHHhcccEEEccCCCCCcccHHHHHhcCCC--CCCHH-H----HHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHH
Q 000789 447 KWIREKIGLVSQEPILFATSLRENIAYGKE--NATDQ-E----IRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQK 519 (1283)
Q Consensus 447 ~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~--~~~~~-~----~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqk 519 (1283)
..++++++|++|++.+|..|++||+.++.. ...++ . +.++++..++ .+++.......+..||||||
T Consensus 101 ~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~~-------~~~l~~~~~~~~~~LSgGe~ 173 (271)
T PRK14238 101 EELRTNVGMVFQKPNPFPKSIYDNVTYGPKIHGIKDKKTLDEIVEKSLRGAAI-------WDELKDRLHDNAYGLSGGQQ 173 (271)
T ss_pred HHHhhhEEEEecCCccccccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCC-------cchHHHHHhcCcccCCHHHH
Confidence 567889999999999998999999987532 11111 1 1222222211 12334455677889999999
Q ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHH
Q 000789 520 QRIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMTSRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDEL 598 (1283)
Q Consensus 520 qriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l 598 (1283)
||++|||||+.+|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 174 qrv~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g~~~~~ 253 (271)
T PRK14238 174 QRLCIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKKDYSIIIVTHNMQQAARISDKTAFFLNGYVNEYDDTDKI 253 (271)
T ss_pred HHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998778999999999999875 999999999999999999999
Q ss_pred hcCCCC
Q 000789 599 IKDPEG 604 (1283)
Q Consensus 599 ~~~~~~ 604 (1283)
..++..
T Consensus 254 ~~~~~~ 259 (271)
T PRK14238 254 FSNPSD 259 (271)
T ss_pred HcCCCC
Confidence 766433
No 404
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-40 Score=373.45 Aligned_cols=223 Identities=30% Similarity=0.490 Sum_probs=189.1
Q ss_pred ccEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCC-----cceEEECCccCCC--CC
Q 000789 1038 GAIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPD-----SGHVLLDNIELPK--FK 1110 (1283)
Q Consensus 1038 g~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~-----~G~I~idG~di~~--~~ 1110 (1283)
+.|+++||+++|++ ..+|+|+||+|++||.+||+|+||||||||+++|.|+++|+ +|+|.+||.++.. .+
T Consensus 6 ~~l~~~nl~~~~~~---~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g~~i~~~~~~ 82 (261)
T PRK14258 6 PAIKVNNLSFYYDT---QKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFNQNIYERRVN 82 (261)
T ss_pred ceEEEeeEEEEeCC---eeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECCEEhhccccc
Confidence 36999999999974 35999999999999999999999999999999999999985 8999999999853 34
Q ss_pred hHHHhcceEEEccCCCCChhhHHHHHhcCCC-CCC-C----HHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhH
Q 000789 1111 LSWLRQQMGLVSQEPVLFNETIRTNIAYGKQ-GGA-T----EEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQ 1184 (1283)
Q Consensus 1111 ~~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~-~~~-s----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQ 1184 (1283)
...+|+.++|+||++.+|..|++||+.++.. ... + ++.+.++++..++.+++.. ..+..+..|||||
T Consensus 83 ~~~~~~~i~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LSgGq 155 (261)
T PRK14258 83 LNRLRRQVSMVHPKPNLFPMSVYDNVAYGVKIVGWRPKLEIDDIVESALKDADLWDEIKH-------KIHKSALDLSGGQ 155 (261)
T ss_pred hHHhhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcchhhh-------HhcCCcccCCHHH
Confidence 5678899999999999999999999976411 011 2 2345667777776554432 2344556899999
Q ss_pred HHHHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHc--CCceEEEEecCchHHhh-cCEEEEEeC-----CEEE
Q 000789 1185 KQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVM--VNRTTVVVAHRLTTIKN-ADIIAVVKN-----GVIA 1256 (1283)
Q Consensus 1185 rQRlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~--~~~TvI~IaHrl~ti~~-~D~I~vl~~-----G~Iv 1256 (1283)
|||++||||++++|++|||||||++||+++...+.+.|+++. .++|+|+|||+++.+.. ||+|++|++ |+++
T Consensus 156 ~qrv~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiiivsH~~~~i~~~~d~i~~l~~~~~~~G~i~ 235 (261)
T PRK14258 156 QQRLCIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSELTMVIVSHNLHQVSRLSDFTAFFKGNENRIGQLV 235 (261)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhcCEEEEEccCCCcCceEE
Confidence 999999999999999999999999999999999999999863 47999999999999876 999999999 9999
Q ss_pred EecChHHHHhccCc
Q 000789 1257 EQGSHDALMKITDG 1270 (1283)
Q Consensus 1257 e~Gt~~eLl~~~~g 1270 (1283)
+.|+++++...+..
T Consensus 236 ~~~~~~~~~~~~~~ 249 (261)
T PRK14258 236 EFGLTKKIFNSPHD 249 (261)
T ss_pred EeCCHHHHHhCCCC
Confidence 99999999865444
No 405
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=1.3e-40 Score=365.95 Aligned_cols=205 Identities=28% Similarity=0.447 Sum_probs=174.5
Q ss_pred EEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChH---HHhc
Q 000789 1040 IELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLS---WLRQ 1116 (1283)
Q Consensus 1040 I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~---~lR~ 1116 (1283)
|+++||+++|+. +.++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++.+++.. .+|+
T Consensus 2 l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 79 (222)
T PRK10908 2 IRFEHVSKAYLG--GRQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPSAGKIWFSGHDITRLKNREVPFLRR 79 (222)
T ss_pred EEEEeeEEEecC--CCeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCChhHHHHHHh
Confidence 789999999952 24699999999999999999999999999999999999999999999999999877644 3688
Q ss_pred ceEEEccCCCC-ChhhHHHHHhcCCC-CCCCHH----HHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHH
Q 000789 1117 QMGLVSQEPVL-FNETIRTNIAYGKQ-GGATEE----EIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAI 1190 (1283)
Q Consensus 1117 ~i~~V~Qdp~L-f~gTIreNl~~g~~-~~~sd~----ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlai 1190 (1283)
.++|+||+|.+ +..|++||+.++.. ...+++ ++.++++..++.+...+ ...+||||||||++|
T Consensus 80 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv~l 148 (222)
T PRK10908 80 QIGMIFQDHHLLMDRTVYDNVAIPLIIAGASGDDIRRRVSAALDKVGLLDKAKN-----------FPIQLSGGEQQRVGI 148 (222)
T ss_pred heEEEecCccccccccHHHHHHhHHHhcCCCHHHHHHHHHHHHHHcCChhhhhC-----------CchhCCHHHHHHHHH
Confidence 99999999986 57799999986421 122332 34556666666554433 335899999999999
Q ss_pred HHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchHHhh-cCEEEEEeCCEEEE
Q 000789 1191 ARAVLKNPKILLLDEATSALDAESERVVQDALERVM-VNRTTVVVAHRLTTIKN-ADIIAVVKNGVIAE 1257 (1283)
Q Consensus 1191 ARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive 1257 (1283)
|||++++|++|||||||++||+.+.+.+.+.|+++. +++|+|+|||+++.+.. ||+|++|++|+++.
T Consensus 149 aral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~ 217 (222)
T PRK10908 149 ARAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIGLISRRSYRMLTLSDGHLHG 217 (222)
T ss_pred HHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEcc
Confidence 999999999999999999999999999999999874 46899999999999977 89999999999853
No 406
>PRK14252 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-40 Score=373.87 Aligned_cols=224 Identities=29% Similarity=0.449 Sum_probs=190.3
Q ss_pred cccEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCC-----CcceEEECCccCC----
Q 000789 1037 GGAIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDP-----DSGHVLLDNIELP---- 1107 (1283)
Q Consensus 1037 ~g~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~-----~~G~I~idG~di~---- 1107 (1283)
.+.|+++|++++|++ .++|+|+||+|++||+++|+|+||||||||+++|.|+.+| ++|+|.+||.++.
T Consensus 14 ~~~l~~~~l~~~~~~---~~vl~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~sG~i~~~g~~~~~~~~ 90 (265)
T PRK14252 14 QQKSEVNKLNFYYGG---YQALKNINMMVHEKQVTALIGPSGCGKSTFLRCFNRMHDLYPGNHYEGEIILHPDNVNILSP 90 (265)
T ss_pred CceEEEEEEEEEECC---eeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCCCcccEEEEcCcccccccc
Confidence 356999999999974 3599999999999999999999999999999999999875 7999999998874
Q ss_pred CCChHHHhcceEEEccCCCCChhhHHHHHhcCCC-CC-----CCHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCC
Q 000789 1108 KFKLSWLRQQMGLVSQEPVLFNETIRTNIAYGKQ-GG-----ATEEEIIAATEASNAHNFISALPHGYETNVGERGVQLS 1181 (1283)
Q Consensus 1108 ~~~~~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~-~~-----~sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LS 1181 (1283)
..+...+|+.++|+||++.+|.+|++||+.++.. .. ..++++.++++.+++.+.+ .+........||
T Consensus 91 ~~~~~~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-------~~~~~~~~~~LS 163 (265)
T PRK14252 91 EVDPIEVRMRISMVFQKPNPFPKSIFENVAYGLRIRGVKRRSILEERVENALRNAALWDEV-------KDRLGDLAFNLS 163 (265)
T ss_pred ccCHHHHhccEEEEccCCcCCcchHHHHHHhHHHHcCCChHHHHHHHHHHHHHHcCCchhh-------hHHHhCCcccCC
Confidence 2344578899999999999999999999986421 11 1235566777777664332 233445566899
Q ss_pred hhHHHHHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcCCceEEEEecCchHHhh-cCEEEEEeCCEEEEecC
Q 000789 1182 GGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGS 1260 (1283)
Q Consensus 1182 gGQrQRlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt 1260 (1283)
||||||++||||++++|++|||||||++||+.+...+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|+
T Consensus 164 ~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~tiiivth~~~~~~~~~d~i~~l~~G~i~~~g~ 243 (265)
T PRK14252 164 GGQQQRLCIARALATDPEILLFDEPTSALDPIATASIEELISDLKNKVTILIVTHNMQQAARVSDYTAYMYMGELIEFGA 243 (265)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999999999999998777899999999999965 99999999999999999
Q ss_pred hHHHHhccCc
Q 000789 1261 HDALMKITDG 1270 (1283)
Q Consensus 1261 ~~eLl~~~~g 1270 (1283)
++++...+..
T Consensus 244 ~~~~~~~~~~ 253 (265)
T PRK14252 244 TDTIFIKPKN 253 (265)
T ss_pred HHHHHhCCCC
Confidence 9999764333
No 407
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-40 Score=373.33 Aligned_cols=221 Identities=22% Similarity=0.394 Sum_probs=183.2
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHH-hcc
Q 000789 1039 AIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWL-RQQ 1117 (1283)
Q Consensus 1039 ~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~l-R~~ 1117 (1283)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+ |..
T Consensus 5 ~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (255)
T PRK11300 5 LLSVSGLMMRFGG---LLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPTGGTILLRGQHIEGLPGHQIARMG 81 (255)
T ss_pred eEEEeeEEEEECC---EEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCcceEEECCEECCCCCHHHHHhcC
Confidence 4899999999973 469999999999999999999999999999999999999999999999999988776554 456
Q ss_pred eEEEccCCCCChh-hHHHHHhcCCCCC--------------CCHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCCh
Q 000789 1118 MGLVSQEPVLFNE-TIRTNIAYGKQGG--------------ATEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSG 1182 (1283)
Q Consensus 1118 i~~V~Qdp~Lf~g-TIreNl~~g~~~~--------------~sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSg 1182 (1283)
++|+||+|.+|.. |++||+.++.... ..++ ..+.. ..+.++++.+ |++........+|||
T Consensus 82 i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~l~~~--gl~~~~~~~~~~LS~ 156 (255)
T PRK11300 82 VVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRA-ESEAL--DRAATWLERV--GLLEHANRQAGNLAY 156 (255)
T ss_pred eEEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccc-hhHHH--HHHHHHHHhC--ChhhhhhCChhhCCH
Confidence 9999999999975 9999998752100 0000 00000 1122333333 444445566678999
Q ss_pred hHHHHHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchHHhh-cCEEEEEeCCEEEEec
Q 000789 1183 GQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMV--NRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQG 1259 (1283)
Q Consensus 1183 GQrQRlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~G 1259 (1283)
|||||++||||++.+|++|||||||++||+.+.+.+.+.|.++.+ ++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 157 G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~ 236 (255)
T PRK11300 157 GQQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMKLVMGISDRIYVVNQGTPLANG 236 (255)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEecC
Confidence 999999999999999999999999999999999999999998753 7899999999999866 9999999999999999
Q ss_pred ChHHHHhc
Q 000789 1260 SHDALMKI 1267 (1283)
Q Consensus 1260 t~~eLl~~ 1267 (1283)
+++++...
T Consensus 237 ~~~~~~~~ 244 (255)
T PRK11300 237 TPEEIRNN 244 (255)
T ss_pred CHHHHhhC
Confidence 99998753
No 408
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-40 Score=372.91 Aligned_cols=225 Identities=27% Similarity=0.472 Sum_probs=187.4
Q ss_pred cEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCC-----CCceEEECCcccCCC--CH
Q 000789 374 EIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDP-----DAGEVLIDGIDIKKL--QL 446 (1283)
Q Consensus 374 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~~~--~~ 446 (1283)
.|+++||+|+|++ .++|+|+||++++||+++|+||||||||||+++|+|+++| ++|+|.++|+++... +.
T Consensus 6 ~i~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 82 (253)
T PRK14261 6 ILSTKNLNLWYGE---KHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNGENIMDSGADV 82 (253)
T ss_pred eEEEeeeEEEECC---eeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEccccccch
Confidence 4899999999963 3599999999999999999999999999999999999763 489999999998765 44
Q ss_pred HHHhcccEEEccCCCCCcccHHHHHhcCCCCC---CH----HHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHH
Q 000789 447 KWIREKIGLVSQEPILFATSLRENIAYGKENA---TD----QEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQK 519 (1283)
Q Consensus 447 ~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~---~~----~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqk 519 (1283)
...++.++|++|++.+|+.|++||+.++.... .. +.+.++++..++. +++.+..++.+.+||||||
T Consensus 83 ~~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-------~~l~~~~~~~~~~LS~G~~ 155 (253)
T PRK14261 83 VALRRKIGMVFQRPNPFPKSIYENVAYGPRIHGEKNKKTLDTIVEKSLKGAALW-------DEVKDRLHDSALSLSGGQQ 155 (253)
T ss_pred hhhhceEEEEecCCccCcccHHHHHHhhHHhcCCCCHHHHHHHHHHHHHHhcCc-------hhhHHHhhcChhhCCHHHH
Confidence 56778899999999999999999999863211 11 1222333332221 2233456778889999999
Q ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHH
Q 000789 520 QRIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMTSRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDEL 598 (1283)
Q Consensus 520 qriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l 598 (1283)
||++||||++.+|+++||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 156 qrv~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~tvii~sh~~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 235 (253)
T PRK14261 156 QRLCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKKEYTVIIVTHNMQQAARVSDYTGFMYLGKLIEFDKTTQI 235 (253)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhhCceEEEEEcCHHHHHhhCCEEEEEECCEEEEcCCHHHH
Confidence 9999999999999999999999999999999999999998777899999999999975 999999999999999999998
Q ss_pred hcCCCChhHH
Q 000789 599 IKDPEGPYTQ 608 (1283)
Q Consensus 599 ~~~~~~~~~~ 608 (1283)
..++...+.+
T Consensus 236 ~~~~~~~~~~ 245 (253)
T PRK14261 236 FENPHEELTE 245 (253)
T ss_pred HhCCCcHHHH
Confidence 7654333443
No 409
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.6e-41 Score=374.72 Aligned_cols=222 Identities=31% Similarity=0.530 Sum_probs=183.5
Q ss_pred EEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCC-----CCCceEEECCcccCCCC--HH
Q 000789 375 IELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYD-----PDAGEVLIDGIDIKKLQ--LK 447 (1283)
Q Consensus 375 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~~~g~~~~~~~--~~ 447 (1283)
-+++||+|+|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|+++...+ ..
T Consensus 6 ~~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 82 (251)
T PRK14244 6 ASVKNLNLWYGS---KQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVV 82 (251)
T ss_pred EEeeeEEEEECC---eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchH
Confidence 468999999963 369999999999999999999999999999999999986 47999999999886543 33
Q ss_pred HHhcccEEEccCCCCCcccHHHHHhcCCC--CC--CH----HHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHH
Q 000789 448 WIREKIGLVSQEPILFATSLRENIAYGKE--NA--TD----QEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQK 519 (1283)
Q Consensus 448 ~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~--~~--~~----~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqk 519 (1283)
.+|+.++||+|++.+|+.|++||+.++.. .. .. +++.++++..++.++ +.+.++..+.+||||||
T Consensus 83 ~~~~~i~~v~q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~~~~~~~~~LS~Gq~ 155 (251)
T PRK14244 83 LLRAKVGMVFQKPNPFPKSIYDNVAYGPKLHGLAKNKKKLDEIVEKSLTSVGLWEE-------LGDRLKDSAFELSGGQQ 155 (251)
T ss_pred HHhhhEEEEecCcccccCCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCch-------hhhHhhcChhhCCHHHH
Confidence 56789999999999999999999987521 11 11 122233333322211 12345667789999999
Q ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHH
Q 000789 520 QRIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMTSRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDEL 598 (1283)
Q Consensus 520 qriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l 598 (1283)
||++|||||+++|++|||||||++||+.+.+.+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 156 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 235 (251)
T PRK14244 156 QRLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELKKNFTIIVVTHSMKQAKKVSDRVAFFQSGRIVEYNTTQEI 235 (251)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhcCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998778999999999999875 999999999999999999999
Q ss_pred hcCCCChh
Q 000789 599 IKDPEGPY 606 (1283)
Q Consensus 599 ~~~~~~~~ 606 (1283)
...+...+
T Consensus 236 ~~~~~~~~ 243 (251)
T PRK14244 236 FKNPQSSK 243 (251)
T ss_pred hcCCCChH
Confidence 87644433
No 410
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.3e-41 Score=367.33 Aligned_cols=209 Identities=35% Similarity=0.530 Sum_probs=174.2
Q ss_pred EEEEEEEEECCCCC-CCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHHhccc
Q 000789 375 IELRDVYFRYPARP-EVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWIREKI 453 (1283)
Q Consensus 375 i~~~~v~f~y~~~~-~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 453 (1283)
|+++|++++|++.. ..++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++.. .++.+
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-----~~~~i 75 (220)
T cd03293 1 LEVRNVSKTYGGGGGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPTSGEVLVDGEPVTG-----PGPDR 75 (220)
T ss_pred CeEEEEEEEcCCCCcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECcc-----ccCcE
Confidence 47899999997421 1469999999999999999999999999999999999999999999999998763 35789
Q ss_pred EEEccCCCCCc-ccHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHhc
Q 000789 454 GLVSQEPILFA-TSLRENIAYGKEN--ATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARAILK 530 (1283)
Q Consensus 454 ~~v~Q~~~l~~-~ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARal~~ 530 (1283)
+||+|++.+|+ .|++||+.++... ...++.. ..+.+.++.+ |++........+||||||||++|||||+.
T Consensus 76 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrl~la~al~~ 148 (220)
T cd03293 76 GYVFQQDALLPWLTVLDNVALGLELQGVPKAEAR-----ERAEELLELV--GLSGFENAYPHQLSGGMRQRVALARALAV 148 (220)
T ss_pred EEEecccccccCCCHHHHHHHHHHHcCCCHHHHH-----HHHHHHHHHc--CChhhhhCCcccCCHHHHHHHHHHHHHHc
Confidence 99999999987 5999999875321 1111111 1223444444 55555566667999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHc--CCCeEEEEecCchhhhc-cCEEEEEe--CCEEeEecCh
Q 000789 531 NPKILLLDEATSALDAESERIVQDALVKIM--TSRTTVVVAHRLTTIRN-ADLIAVVH--QGKIVEKGTH 595 (1283)
Q Consensus 531 ~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~vl~--~G~i~~~g~~ 595 (1283)
+|++|||||||++||+.+.+.+.+.|+++. .++|+|+|||+++.+.. ||+|++|+ +|+++++++.
T Consensus 149 ~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 149 DPDVLLLDEPFSALDALTREQLQEELLDIWRETGKTVLLVTHDIDEAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred CCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCCCEEEEEEEe
Confidence 999999999999999999999999999874 36899999999998865 99999999 7999998764
No 411
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=8.7e-41 Score=365.12 Aligned_cols=207 Identities=32% Similarity=0.547 Sum_probs=174.4
Q ss_pred EEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHHhcccE
Q 000789 375 IELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWIREKIG 454 (1283)
Q Consensus 375 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 454 (1283)
|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+.. +++++
T Consensus 1 i~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~v~~~g~~~~~~~~~--~~~i~ 75 (213)
T cd03301 1 VELENVTKRFGN---VTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPTSGRIYIGGRDVTDLPPK--DRDIA 75 (213)
T ss_pred CEEEeeEEEECC---eeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCcc--cceEE
Confidence 478999999964 3699999999999999999999999999999999999999999999999998765432 46899
Q ss_pred EEccCCCCCc-ccHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHhcC
Q 000789 455 LVSQEPILFA-TSLRENIAYGKEN--ATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARAILKN 531 (1283)
Q Consensus 455 ~v~Q~~~l~~-~ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARal~~~ 531 (1283)
|++|++.+|. .|++||+.++... ...++..+ .+.+.++.+ |++........+||||||||++|||||+.+
T Consensus 76 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qr~~laral~~~ 148 (213)
T cd03301 76 MVFQNYALYPHMTVYDNIAFGLKLRKVPKDEIDE-----RVREVAELL--QIEHLLDRKPKQLSGGQRQRVALGRAIVRE 148 (213)
T ss_pred EEecChhhccCCCHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CCHHHHhCChhhCCHHHHHHHHHHHHHhcC
Confidence 9999999886 5999999875321 12222111 122334444 555555666789999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhc-cCEEEEEeCCEEeEec
Q 000789 532 PKILLLDEATSALDAESERIVQDALVKIMT--SRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKG 593 (1283)
Q Consensus 532 ~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g 593 (1283)
|+++||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 149 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~g~~~~~g 213 (213)
T cd03301 149 PKVFLMDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQVEAMTMADRIAVMNDGQIQQIG 213 (213)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 999999999999999999999999998753 6899999999999876 9999999999999876
No 412
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=1.3e-40 Score=382.02 Aligned_cols=217 Identities=26% Similarity=0.461 Sum_probs=183.1
Q ss_pred cEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHHhccc
Q 000789 374 EIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWIREKI 453 (1283)
Q Consensus 374 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 453 (1283)
.|+++||+++|++ .++|+|+||+|++|+++||+||||||||||+++|+|+++|++|+|.++|.++... ....|+++
T Consensus 4 ~i~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~-~~~~~~~i 79 (303)
T TIGR01288 4 AIDLVGVSKSYGD---KVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITVLGEPVPSR-ARLARVAI 79 (303)
T ss_pred EEEEEeEEEEeCC---eEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccc-HHHHhhcE
Confidence 4899999999963 3599999999999999999999999999999999999999999999999998653 34568899
Q ss_pred EEEccCCCCCc-ccHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHhc
Q 000789 454 GLVSQEPILFA-TSLRENIAYGKE--NATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARAILK 530 (1283)
Q Consensus 454 ~~v~Q~~~l~~-~ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARal~~ 530 (1283)
||+||++.++. .|++||+.+... ..+..+..+.+ .+.++.+ |++........+||||||||++|||||+.
T Consensus 80 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~-----~~ll~~~--~l~~~~~~~~~~LSgG~~qrv~la~al~~ 152 (303)
T TIGR01288 80 GVVPQFDNLDPEFTVRENLLVFGRYFGMSTREIEAVI-----PSLLEFA--RLESKADVRVALLSGGMKRRLTLARALIN 152 (303)
T ss_pred EEEeccccCCcCCcHHHHHHHHHHHcCCCHHHHHHHH-----HHHHHHC--CChhHhcCchhhCCHHHHHHHHHHHHHhc
Confidence 99999999886 599999975321 12222222211 2233333 55555556667899999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHHhcC
Q 000789 531 NPKILLLDEATSALDAESERIVQDALVKIM-TSRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDELIKD 601 (1283)
Q Consensus 531 ~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~ 601 (1283)
+|++|||||||++||+.+.+.+.+.|+++. +++|+|++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 153 ~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 225 (303)
T TIGR01288 153 DPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLESGRKIAEGRPHALIDE 225 (303)
T ss_pred CCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhh
Confidence 999999999999999999999999999875 47899999999999975 999999999999999999998754
No 413
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=1.3e-40 Score=384.50 Aligned_cols=217 Identities=28% Similarity=0.508 Sum_probs=184.0
Q ss_pred cEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHHhccc
Q 000789 374 EIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWIREKI 453 (1283)
Q Consensus 374 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 453 (1283)
.|+++||+++|++ ..+|+|+||+|++|+++||+||||||||||+++|+|+++|++|+|.++|+++...+ ...++.|
T Consensus 41 ~i~i~nl~k~y~~---~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~~G~i~i~G~~~~~~~-~~~~~~i 116 (340)
T PRK13536 41 AIDLAGVSKSYGD---KAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPDAGKITVLGVPVPARA-RLARARI 116 (340)
T ss_pred eEEEEEEEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCceEEEECCEECCcch-HHHhccE
Confidence 5999999999963 35999999999999999999999999999999999999999999999999987654 4678899
Q ss_pred EEEccCCCCCc-ccHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHhc
Q 000789 454 GLVSQEPILFA-TSLRENIAYGKE--NATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARAILK 530 (1283)
Q Consensus 454 ~~v~Q~~~l~~-~ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARal~~ 530 (1283)
||+||++.++. .|++||+.+... ..+..+..+.+ .++++.+ |++........+||||||||++|||||+.
T Consensus 117 g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~-----~~ll~~~--~L~~~~~~~~~~LS~G~kqrv~lA~aL~~ 189 (340)
T PRK13536 117 GVVPQFDNLDLEFTVRENLLVFGRYFGMSTREIEAVI-----PSLLEFA--RLESKADARVSDLSGGMKRRLTLARALIN 189 (340)
T ss_pred EEEeCCccCCCCCcHHHHHHHHHHHcCCCHHHHHHHH-----HHHHHHc--CCchhhCCChhhCCHHHHHHHHHHHHHhc
Confidence 99999999875 599999986321 12222222211 2333333 55544556667899999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC-CCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHHhcC
Q 000789 531 NPKILLLDEATSALDAESERIVQDALVKIMT-SRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDELIKD 601 (1283)
Q Consensus 531 ~~~illlDE~ts~lD~~~~~~i~~~l~~~~~-~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~ 601 (1283)
+|++|||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+.. ||+|++|++|+|++.|+++++...
T Consensus 190 ~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 262 (340)
T PRK13536 190 DPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLEAGRKIAEGRPHALIDE 262 (340)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhh
Confidence 9999999999999999999999999998854 7899999999999976 999999999999999999998754
No 414
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=1.3e-40 Score=368.24 Aligned_cols=214 Identities=30% Similarity=0.509 Sum_probs=180.4
Q ss_pred EEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHH-Hhccc
Q 000789 375 IELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKW-IREKI 453 (1283)
Q Consensus 375 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~-~r~~i 453 (1283)
|+++||++.|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... .++++
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (230)
T TIGR03410 1 LEVSNLNVYYGQ---SHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVKSGSIRLDGEDITKLPPHERARAGI 77 (230)
T ss_pred CEEEeEEEEeCC---eEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHHhCe
Confidence 478999999973 36999999999999999999999999999999999999999999999999998776554 46789
Q ss_pred EEEccCCCCCcc-cHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHhcCC
Q 000789 454 GLVSQEPILFAT-SLRENIAYGKENATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARAILKNP 532 (1283)
Q Consensus 454 ~~v~Q~~~l~~~-ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARal~~~~ 532 (1283)
+|++|++.+|+. |++||+.++.......+ .+. .++.++.+ ++++........+||||||||++|||||+++|
T Consensus 78 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~-~~~-----~~~~l~~~-~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p 150 (230)
T TIGR03410 78 AYVPQGREIFPRLTVEENLLTGLAALPRRS-RKI-----PDEIYELF-PVLKEMLGRRGGDLSGGQQQQLAIARALVTRP 150 (230)
T ss_pred EEeccCCcccCCCcHHHHHHHHHHhcCcch-HHH-----HHHHHHHH-HhHHHHhhCChhhCCHHHHHHHHHHHHHhcCC
Confidence 999999999986 99999987643211110 000 11222222 12344456677899999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHH
Q 000789 533 KILLLDEATSALDAESERIVQDALVKIMT--SRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDEL 598 (1283)
Q Consensus 533 ~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l 598 (1283)
+++||||||++||+.+.+.+.+.|.++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 151 ~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~g~i~~~~~~~~~ 219 (230)
T TIGR03410 151 KLLLLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLDFARELADRYYVMERGRVVASGAGDEL 219 (230)
T ss_pred CEEEecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHc
Confidence 99999999999999999999999998764 6899999999999986 999999999999999999887
No 415
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=1.4e-40 Score=365.69 Aligned_cols=211 Identities=28% Similarity=0.447 Sum_probs=180.6
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHhcce
Q 000789 1039 AIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQM 1118 (1283)
Q Consensus 1039 ~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i 1118 (1283)
.|+++||+++|++ .++++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||.++.+.+...+|+.+
T Consensus 7 ~i~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 83 (225)
T PRK10247 7 LLQLQNVGYLAGD---AKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDISTLKPEIYRQQV 83 (225)
T ss_pred eEEEeccEEeeCC---ceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEcCcCCHHHHHhcc
Confidence 4999999999974 3599999999999999999999999999999999999999999999999999888888889999
Q ss_pred EEEccCCCCChhhHHHHHhcCCC--CC-CCHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHHHHHc
Q 000789 1119 GLVSQEPVLFNETIRTNIAYGKQ--GG-ATEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVL 1195 (1283)
Q Consensus 1119 ~~V~Qdp~Lf~gTIreNl~~g~~--~~-~sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiARAll 1195 (1283)
+|+||++.+|+.|++||+.++.. .. ..++++.+.++..++.+ +.......+||||||||++|||||+
T Consensus 84 ~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~~l~~----------~~~~~~~~~LS~G~~qrv~laral~ 153 (225)
T PRK10247 84 SYCAQTPTLFGDTVYDNLIFPWQIRNQQPDPAIFLDDLERFALPD----------TILTKNIAELSGGEKQRISLIRNLQ 153 (225)
T ss_pred EEEecccccccccHHHHHHhHHhhcCCChHHHHHHHHHHHcCCCh----------HHhcCCcccCCHHHHHHHHHHHHHh
Confidence 99999999999999999975311 11 12233444555544421 2234455689999999999999999
Q ss_pred cCCCEEEEecccCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchHHhhcCEEEEEe-CCEEEEecChH
Q 000789 1196 KNPKILLLDEATSALDAESERVVQDALERVMV--NRTTVVVAHRLTTIKNADIIAVVK-NGVIAEQGSHD 1262 (1283)
Q Consensus 1196 ~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~~D~I~vl~-~G~Ive~Gt~~ 1262 (1283)
++|++|||||||++||+.+.+.+.+.|+++.+ ++|+|+|||+++.+..||++++|+ ++..+++|+|+
T Consensus 154 ~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~~~~~~d~i~~l~~~~~~~~~~~~~ 223 (225)
T PRK10247 154 FMPKVLLLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKDEINHADKVITLQPHAGEMQEARYE 223 (225)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChHHHHhCCEEEEEecccchHhhhhhc
Confidence 99999999999999999999999999998753 789999999999998899999995 66777889885
No 416
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-40 Score=372.97 Aligned_cols=212 Identities=27% Similarity=0.492 Sum_probs=183.6
Q ss_pred EEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHHhcccE
Q 000789 375 IELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWIREKIG 454 (1283)
Q Consensus 375 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 454 (1283)
|+++|++++|++ .++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.++
T Consensus 3 l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (255)
T PRK11231 3 LRTENLTVGYGT---KRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQSGTVFLGDKPISMLSSRQLARRLA 79 (255)
T ss_pred EEEEeEEEEECC---EEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCcEEEECCEEhHHCCHHHHhhheE
Confidence 789999999963 36999999999999999999999999999999999999999999999999988877777888899
Q ss_pred EEccCCCCCcc-cHHHHHhcCCCCC-------C---HHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHH
Q 000789 455 LVSQEPILFAT-SLRENIAYGKENA-------T---DQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIA 523 (1283)
Q Consensus 455 ~v~Q~~~l~~~-ti~~ni~~~~~~~-------~---~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqria 523 (1283)
|++|++.++.+ |+.||+.++.... . .+++.++++.. |++......+..||||||||++
T Consensus 80 ~~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----------~l~~~~~~~~~~LS~G~~qrv~ 148 (255)
T PRK11231 80 LLPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQT-----------RINHLADRRLTDLSGGQRQRAF 148 (255)
T ss_pred EecccCCCCCCccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHc-----------CCHHHHcCCcccCCHHHHHHHH
Confidence 99999998876 9999999863210 1 11233333333 4444455667899999999999
Q ss_pred HHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHHhc
Q 000789 524 IARAILKNPKILLLDEATSALDAESERIVQDALVKIM-TSRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDELIK 600 (1283)
Q Consensus 524 iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~ 600 (1283)
||||++.+|++|||||||++||+++.+.+.+.|+++. +++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 149 laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 227 (255)
T PRK11231 149 LAMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLNQASRYCDHLVVLANGHVMAQGTPEEVMT 227 (255)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHhcCEEEEEECCeEEEEcCHHHhcC
Confidence 9999999999999999999999999999999999875 47899999999999875 99999999999999999988864
No 417
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=2.2e-40 Score=366.19 Aligned_cols=213 Identities=35% Similarity=0.509 Sum_probs=173.2
Q ss_pred EEEEEEEEECCCCC-CcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCCh---HHHh
Q 000789 1040 IELRCVSFKYPTRP-DVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKL---SWLR 1115 (1283)
Q Consensus 1040 I~~~nVsf~Y~~~~-~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~---~~lR 1115 (1283)
|+++||+++|+.+. ..++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++.+.+. ..+|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (228)
T cd03257 2 LEVKNLSVSFPTGGGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPTSGSIIFDGKDLLKLSRRLRKIRR 81 (228)
T ss_pred eEEEeeeEeccCCCcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccchhhHHHhh
Confidence 78999999997431 1269999999999999999999999999999999999999999999999999987763 5778
Q ss_pred cceEEEccCC--CCC-hhhHHHHHhcCCC---CCCCHHHHHHHHHHhChHHHHHhCCCCcc-cccCCCCCCCChhHHHHH
Q 000789 1116 QQMGLVSQEP--VLF-NETIRTNIAYGKQ---GGATEEEIIAATEASNAHNFISALPHGYE-TNVGERGVQLSGGQKQRI 1188 (1283)
Q Consensus 1116 ~~i~~V~Qdp--~Lf-~gTIreNl~~g~~---~~~sd~ei~~al~~a~l~~~I~~lp~Gld-t~vge~G~~LSgGQrQRl 1188 (1283)
++++|+||+| .++ ..|++||+.++.. ....+++...+. .+.+..+ |++ ........+||||||||+
T Consensus 82 ~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~-----~~~l~~~--~l~~~~~~~~~~~LS~G~~qrv 154 (228)
T cd03257 82 KEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGKLSKKEARKEAV-----LLLLVGV--GLPEEVLNRYPHELSGGQRQRV 154 (228)
T ss_pred ccEEEEecCchhhcCCcCCHHHHHHHHHHhccCCcHHHHHHHHH-----HHHHHHC--CCChhHhhCCchhcCHHHHHHH
Confidence 8999999999 344 5799999975311 111122111111 1222332 232 233445568999999999
Q ss_pred HHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchHHhh-cCEEEEEeCCEEEEec
Q 000789 1189 AIARAVLKNPKILLLDEATSALDAESERVVQDALERVMV--NRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQG 1259 (1283)
Q Consensus 1189 aiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~G 1259 (1283)
+||||++.+|+||||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 155 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g 228 (228)
T cd03257 155 AIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLGVVAKIADRVAVMYAGKIVEEG 228 (228)
T ss_pred HHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEeCCEEEecC
Confidence 999999999999999999999999999999999998764 7899999999999884 9999999999998765
No 418
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-40 Score=370.17 Aligned_cols=205 Identities=34% Similarity=0.486 Sum_probs=176.2
Q ss_pred ccEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHHhcc
Q 000789 373 GEIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWIREK 452 (1283)
Q Consensus 373 ~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~ 452 (1283)
..|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++. .++++
T Consensus 11 ~~l~i~~l~~~~~~---~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~~G~i~~~g~~~~-----~~~~~ 82 (257)
T PRK11247 11 TPLLLNAVSKRYGE---RTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPSAGELLAGTAPLA-----EARED 82 (257)
T ss_pred CcEEEEEEEEEECC---cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEHH-----HhhCc
Confidence 35999999999963 36999999999999999999999999999999999999999999999997653 45778
Q ss_pred cEEEccCCCCCc-ccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHhcC
Q 000789 453 IGLVSQEPILFA-TSLRENIAYGKENATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARAILKN 531 (1283)
Q Consensus 453 i~~v~Q~~~l~~-~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARal~~~ 531 (1283)
++|++|++.+|+ .|++||+.++.....++++.++ ++.+ |++......+.+||||||||++|||||+++
T Consensus 83 i~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~---------l~~~--gl~~~~~~~~~~LSgGqkqrl~laraL~~~ 151 (257)
T PRK11247 83 TRLMFQDARLLPWKKVIDNVGLGLKGQWRDAALQA---------LAAV--GLADRANEWPAALSGGQKQRVALARALIHR 151 (257)
T ss_pred eEEEecCccCCCCCcHHHHHHhcccchHHHHHHHH---------HHHc--CChhHhcCChhhCCHHHHHHHHHHHHHhcC
Confidence 999999999987 5999999986432112333333 3444 555555667789999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHc--CCCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChh
Q 000789 532 PKILLLDEATSALDAESERIVQDALVKIM--TSRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHD 596 (1283)
Q Consensus 532 ~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~ 596 (1283)
|++|||||||++||+.+...+.+.|+++. .++|+|+|||+++.+.. ||+|++|++|++++.|+.+
T Consensus 152 p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~~~~ 219 (257)
T PRK11247 152 PGLLLLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVSEAVAMADRVLLIEEGKIGLDLTVD 219 (257)
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecccc
Confidence 99999999999999999999999999874 36899999999999865 9999999999999988764
No 419
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.3e-40 Score=362.87 Aligned_cols=202 Identities=25% Similarity=0.458 Sum_probs=171.2
Q ss_pred EEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHhcceE
Q 000789 1040 IELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMG 1119 (1283)
Q Consensus 1040 I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~ 1119 (1283)
|+++|++++|++ .++++|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.+||.++.. .+|++++
T Consensus 1 l~~~~l~~~~~~---~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~----~~~~~i~ 73 (210)
T cd03269 1 LEVENVTKRFGR---VTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPDSGEVLFDGKPLDI----AARNRIG 73 (210)
T ss_pred CEEEEEEEEECC---EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCCchhH----HHHccEE
Confidence 578999999973 359999999999999999999999999999999999999999999999998753 5678999
Q ss_pred EEccCCCCCh-hhHHHHHhcCCC-CCCC----HHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHHHH
Q 000789 1120 LVSQEPVLFN-ETIRTNIAYGKQ-GGAT----EEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARA 1193 (1283)
Q Consensus 1120 ~V~Qdp~Lf~-gTIreNl~~g~~-~~~s----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiARA 1193 (1283)
|+||++.+|. .|++||+.+... ...+ ++++.++++..++.+. ......+||||||||++||||
T Consensus 74 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrl~la~a 142 (210)
T cd03269 74 YLPEERGLYPKMKVIDQLVYLAQLKGLKKEEARRRIDEWLERLELSEY-----------ANKRVEELSKGNQQKVQFIAA 142 (210)
T ss_pred EeccCCcCCcCCcHHHHHHHHHHHcCCChHHHHHHHHHHHHHcCChHH-----------HhCcHhhCCHHHHHHHHHHHH
Confidence 9999999887 499999976311 1122 2334445555444433 334456899999999999999
Q ss_pred HccCCCEEEEecccCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchHHhh-cCEEEEEeCCEEEEec
Q 000789 1194 VLKNPKILLLDEATSALDAESERVVQDALERVM-VNRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQG 1259 (1283)
Q Consensus 1194 ll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~G 1259 (1283)
++.+|++|||||||++||+.+.+.+.+.|++.. +++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 143 l~~~p~~lllDEP~~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~ 210 (210)
T cd03269 143 VIHDPELLILDEPFSGLDPVNVELLKDVIRELARAGKTVILSTHQMELVEELCDRVLLLNKGRAVLYG 210 (210)
T ss_pred HhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhhhEEEEEeCCEEEecC
Confidence 999999999999999999999999999999875 47899999999999866 9999999999998865
No 420
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-40 Score=370.81 Aligned_cols=220 Identities=30% Similarity=0.491 Sum_probs=185.3
Q ss_pred cEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCC-----CCceEEECCcccCCC--CH
Q 000789 374 EIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDP-----DAGEVLIDGIDIKKL--QL 446 (1283)
Q Consensus 374 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~~~--~~ 446 (1283)
.|+++|+++.|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.++... +.
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 80 (251)
T PRK14270 4 KMESKNLNLWYGE---KQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDV 80 (251)
T ss_pred EEEEEEeEEEECC---eeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccH
Confidence 5899999999963 3599999999999999999999999999999999999875 799999999998653 34
Q ss_pred HHHhcccEEEccCCCCCcccHHHHHhcCCCC--C-CH----HHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHH
Q 000789 447 KWIREKIGLVSQEPILFATSLRENIAYGKEN--A-TD----QEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQK 519 (1283)
Q Consensus 447 ~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~--~-~~----~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqk 519 (1283)
...++.++|++|++.+|+.|++||+.++... . +. +++.++++.+++.+ ++..........||||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~~~~~~~~~~~~LS~G~~ 153 (251)
T PRK14270 81 VELRKRVGMVFQKPNPFPMSIYDNVAYGPRIHGIKDKKELDKIVEWALKKAALWD-------EVKDDLKKSALKLSGGQQ 153 (251)
T ss_pred HHHHhheEEEecCCCcCCCcHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCch-------hhhhHhhCCcccCCHHHH
Confidence 4668889999999999999999999875321 1 11 12333333333321 222345567789999999
Q ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHH
Q 000789 520 QRIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMTSRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDEL 598 (1283)
Q Consensus 520 qriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l 598 (1283)
||++||||++.+|+||||||||++||+.+...+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 154 qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 233 (251)
T PRK14270 154 QRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKKEYTIVIVTHNMQQASRVSDYTAFFLMGDLIEFNKTEKI 233 (251)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEEcCHHHHHHhcCEEEEEECCeEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998777899999999999876 999999999999999999998
Q ss_pred hcCCC
Q 000789 599 IKDPE 603 (1283)
Q Consensus 599 ~~~~~ 603 (1283)
...+.
T Consensus 234 ~~~~~ 238 (251)
T PRK14270 234 FLEPQ 238 (251)
T ss_pred hcCCC
Confidence 76533
No 421
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-40 Score=382.81 Aligned_cols=229 Identities=22% Similarity=0.346 Sum_probs=188.4
Q ss_pred cEEEEEEEEECCCCC-CcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCC----CCcceEEECCccCCCCChHH
Q 000789 1039 AIELRCVSFKYPTRP-DVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYD----PDSGHVLLDNIELPKFKLSW 1113 (1283)
Q Consensus 1039 ~I~~~nVsf~Y~~~~-~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~----~~~G~I~idG~di~~~~~~~ 1113 (1283)
-|+++|++++|+.+. ...+|+||||+|++||++||+|+||||||||+++|+|+.+ |++|+|.+||+++.+++...
T Consensus 3 ~L~v~~l~~~y~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~ 82 (330)
T PRK15093 3 LLDIRNLTIEFKTSDGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRE 82 (330)
T ss_pred eEEEeeeEEEEeCCCCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHH
Confidence 389999999996421 2469999999999999999999999999999999999986 58999999999998888765
Q ss_pred Hh----cceEEEccCCCC--C-hhhHHHHHhcC---C-C-C----C--CCHHHHHHHHHHhChHHHHHhCCCCcccccCC
Q 000789 1114 LR----QQMGLVSQEPVL--F-NETIRTNIAYG---K-Q-G----G--ATEEEIIAATEASNAHNFISALPHGYETNVGE 1175 (1283)
Q Consensus 1114 lR----~~i~~V~Qdp~L--f-~gTIreNl~~g---~-~-~----~--~sd~ei~~al~~a~l~~~I~~lp~Gldt~vge 1175 (1283)
++ +.|+||||+|.. + ..||.+|+... . . . . ..++++.++++.+++.+.-. ....
T Consensus 83 ~~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~~--------~~~~ 154 (330)
T PRK15093 83 RRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWRKRRAIELLHRVGIKDHKD--------AMRS 154 (330)
T ss_pred HHHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHCCCCChHH--------HHhC
Confidence 53 479999999963 3 45899988531 0 0 0 0 01245667777777753211 1122
Q ss_pred CCCCCChhHHHHHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchHHhh-cCEEEEEeC
Q 000789 1176 RGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMV--NRTTVVVAHRLTTIKN-ADIIAVVKN 1252 (1283)
Q Consensus 1176 ~G~~LSgGQrQRlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~D~I~vl~~ 1252 (1283)
...+||||||||++|||||+.+|+|||||||||+||+.+...|.+.|+++.+ +.|+|+|||+++.+.. ||+|+||++
T Consensus 155 ~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~~v~~~~dri~vm~~ 234 (330)
T PRK15093 155 FPYELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQMLSQWADKINVLYC 234 (330)
T ss_pred CchhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEEC
Confidence 3358999999999999999999999999999999999999999999998764 7899999999999976 999999999
Q ss_pred CEEEEecChHHHHhccCchhHHH
Q 000789 1253 GVIAEQGSHDALMKITDGAYASL 1275 (1283)
Q Consensus 1253 G~Ive~Gt~~eLl~~~~g~y~~L 1275 (1283)
|+|+|.|+++++.+.+...|.+.
T Consensus 235 G~ive~g~~~~i~~~p~~~y~~~ 257 (330)
T PRK15093 235 GQTVETAPSKELVTTPHHPYTQA 257 (330)
T ss_pred CEEEEECCHHHHHhCCCCHHHHH
Confidence 99999999999988666677653
No 422
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-40 Score=371.96 Aligned_cols=223 Identities=28% Similarity=0.431 Sum_probs=186.8
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCC--C---CcceEEECCccCCC--CCh
Q 000789 1039 AIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYD--P---DSGHVLLDNIELPK--FKL 1111 (1283)
Q Consensus 1039 ~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~--~---~~G~I~idG~di~~--~~~ 1111 (1283)
-|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++ | ++|+|.+||.++.. .+.
T Consensus 5 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 81 (252)
T PRK14255 5 IITSSDVHLFYGK---FEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRGQNIYAPNEDV 81 (252)
T ss_pred eEEEEeEEEEECC---eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcCEEcccccccH
Confidence 4899999999974 359999999999999999999999999999999999975 4 58999999999864 344
Q ss_pred HHHhcceEEEccCCCCChhhHHHHHhcCCC-CCC-C----HHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHH
Q 000789 1112 SWLRQQMGLVSQEPVLFNETIRTNIAYGKQ-GGA-T----EEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQK 1185 (1283)
Q Consensus 1112 ~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~-~~~-s----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQr 1185 (1283)
..+|+.++|+||++.+|..|+++|+.++.. ... . ++++.++++.+++.+.+ .........+||||||
T Consensus 82 ~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i-------~~~~~~~~~~LS~Gq~ 154 (252)
T PRK14255 82 VQLRKQVGMVFQQPNPFPFSIYENVIYGLRLAGVKDKAVLDEAVETSLKQAAIWDEV-------KDHLHESALSLSGGQQ 154 (252)
T ss_pred HHhcCeEEEEECCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCccch-------hhHHhcCcccCCHHHH
Confidence 567889999999999999999999986411 111 1 23455556666554332 2223444568999999
Q ss_pred HHHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcCCceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHH
Q 000789 1186 QRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDAL 1264 (1283)
Q Consensus 1186 QRlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eL 1264 (1283)
||++||||++++|++|||||||++||+.+.+.+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|++.+.
T Consensus 155 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 234 (252)
T PRK14255 155 QRVCIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRDQYTIILVTHSMHQASRISDKTAFFLTGNLIEFADTKQM 234 (252)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988767899999999999865 999999999999999999999
Q ss_pred HhccCch
Q 000789 1265 MKITDGA 1271 (1283)
Q Consensus 1265 l~~~~g~ 1271 (1283)
...+...
T Consensus 235 ~~~~~~~ 241 (252)
T PRK14255 235 FLNPKEK 241 (252)
T ss_pred hcCCCCh
Confidence 8754443
No 423
>cd03246 ABCC_Protease_Secretion This family represents the ABC component of the protease secretion system PrtD, a 60-kDa integral membrane protein sharing 37% identity with HlyB, the ABC component of the alpha-hemolysin secretion pathway, in the C-terminal domain. They export degradative enzymes by using a type I protein secretion system and lack an N-terminal signal peptide, but contain a C-terminal secretion signal. The Type I secretion apparatus is made up of three components, an ABC transporter, a membrane fusion protein (MFP), and an outer membrane protein (OMP). For the HlyA transporter complex, HlyB (ABC transporter) and HlyD (MFP) reside in the inner membrane of E. coli. The OMP component is TolC, which is thought to interact with the MFP to form a continuous channel across the periplasm from the cytoplasm to the exterior. HlyB belongs to the family of ABC transporters, which are ubiquitous, ATP-dependent transmembrane pumps or channels. The spectrum of transport substra
Probab=100.00 E-value=1.5e-40 Score=349.98 Aligned_cols=172 Identities=41% Similarity=0.698 Sum_probs=162.1
Q ss_pred EEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHhcceE
Q 000789 1040 IELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMG 1119 (1283)
Q Consensus 1040 I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~ 1119 (1283)
|+++|++++|++. ..++++|+||+|++||.++|+|+||||||||+++|.|+++|++|+|.+||.++.+.+...+|++++
T Consensus 1 i~~~~l~~~~~~~-~~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (173)
T cd03246 1 LEVENVSFRYPGA-EPPVLRNVSFSIEPGESLAIIGPSGSGKSTLARLILGLLRPTSGRVRLDGADISQWDPNELGDHVG 79 (173)
T ss_pred CEEEEEEEEcCCC-CCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEEcccCCHHHHHhheE
Confidence 5789999999743 246999999999999999999999999999999999999999999999999999888888999999
Q ss_pred EEccCCCCChhhHHHHHhcCCCCCCCHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHHHHHccCCC
Q 000789 1120 LVSQEPVLFNETIRTNIAYGKQGGATEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPK 1199 (1283)
Q Consensus 1120 ~V~Qdp~Lf~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiARAll~~p~ 1199 (1283)
|++|+|.+|+.|++||+ ||||||||++||||++++|+
T Consensus 80 ~~~q~~~~~~~tv~~~l-------------------------------------------LS~G~~qrv~la~al~~~p~ 116 (173)
T cd03246 80 YLPQDDELFSGSIAENI-------------------------------------------LSGGQRQRLGLARALYGNPR 116 (173)
T ss_pred EECCCCccccCcHHHHC-------------------------------------------cCHHHHHHHHHHHHHhcCCC
Confidence 99999999999999997 99999999999999999999
Q ss_pred EEEEecccCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchHHhhcCEEEEEeCCEE
Q 000789 1200 ILLLDEATSALDAESERVVQDALERVM-VNRTTVVVAHRLTTIKNADIIAVVKNGVI 1255 (1283)
Q Consensus 1200 ILiLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHrl~ti~~~D~I~vl~~G~I 1255 (1283)
+|||||||++||+.+...+.+.|+++. +++|+|++||+++.+..||++++|++|++
T Consensus 117 ~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i 173 (173)
T cd03246 117 ILVLDEPNSHLDVEGERALNQAIAALKAAGATRIVIAHRPETLASADRILVLEDGRV 173 (173)
T ss_pred EEEEECCccccCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhCCEEEEEECCCC
Confidence 999999999999999999999999875 47899999999999988999999999974
No 424
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-40 Score=371.33 Aligned_cols=219 Identities=30% Similarity=0.505 Sum_probs=183.8
Q ss_pred cEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCC-----CCceEEECCcccCCC--CH
Q 000789 374 EIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDP-----DAGEVLIDGIDIKKL--QL 446 (1283)
Q Consensus 374 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~~~--~~ 446 (1283)
.|+++||++.|++ .++|+|+||++++||+++|+||||||||||+++|+|+++| ++|+|.+||.++... +.
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~ 79 (250)
T PRK14262 3 IIEIENFSAYYGE---KKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDV 79 (250)
T ss_pred eEEEEeeEEEeCC---ceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhH
Confidence 4899999999963 3699999999999999999999999999999999999984 899999999988653 33
Q ss_pred HHHhcccEEEccCCCCCcccHHHHHhcCCCC---CCH----HHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHH
Q 000789 447 KWIREKIGLVSQEPILFATSLRENIAYGKEN---ATD----QEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQK 519 (1283)
Q Consensus 447 ~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~---~~~----~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqk 519 (1283)
..+++.++|++|++.+|+.|++||+.++... ... +++.++++..++++.+ ++.....+.+||||||
T Consensus 80 ~~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LS~Gq~ 152 (250)
T PRK14262 80 TEYRKKVGMVFQKPTPFPMSIYDNVAFGPRIHGVKSKHKLDRIVEESLKKAALWDEV-------KSELNKPGTRLSGGQQ 152 (250)
T ss_pred HHhhhhEEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCchh-------HHHHhCChhhcCHHHH
Confidence 4567889999999999999999999875311 111 1223333333332211 2345677889999999
Q ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHH
Q 000789 520 QRIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMTSRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDEL 598 (1283)
Q Consensus 520 qriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l 598 (1283)
||++|||||+.+|++|||||||++||+.+...+.+.|.++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 153 qr~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tili~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 232 (250)
T PRK14262 153 QRLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSENYTIVIVTHNIGQAIRIADYIAFMYRGELIEYGPTREI 232 (250)
T ss_pred HHHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHH
Confidence 9999999999999999999999999999999999999998777899999999998765 999999999999999999998
Q ss_pred hcCC
Q 000789 599 IKDP 602 (1283)
Q Consensus 599 ~~~~ 602 (1283)
.+.+
T Consensus 233 ~~~~ 236 (250)
T PRK14262 233 VERP 236 (250)
T ss_pred HhCC
Confidence 7653
No 425
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-40 Score=372.88 Aligned_cols=221 Identities=30% Similarity=0.461 Sum_probs=188.5
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCC-----CcceEEECCccCCC--CCh
Q 000789 1039 AIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDP-----DSGHVLLDNIELPK--FKL 1111 (1283)
Q Consensus 1039 ~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~-----~~G~I~idG~di~~--~~~ 1111 (1283)
.|+++||+++|+. .++|+|+||+|++||+++|+|+||||||||+++|.|+++| ++|+|.+||.++.. .+.
T Consensus 20 ~l~~~nl~~~~~~---~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~l~~~~~~~ 96 (274)
T PRK14265 20 VFEVEGVKVFYGG---FLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYRDRNIYDSQINS 96 (274)
T ss_pred eEEEeeEEEEeCC---eEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEECCEecccccchh
Confidence 5999999999974 3599999999999999999999999999999999999864 58999999999864 344
Q ss_pred HHHhcceEEEccCCCCChhhHHHHHhcCCCC-C---CCHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHH
Q 000789 1112 SWLRQQMGLVSQEPVLFNETIRTNIAYGKQG-G---ATEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQR 1187 (1283)
Q Consensus 1112 ~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~~-~---~sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQR 1187 (1283)
..+|++|+|+||++.+|+.|+.||+.++... . ..++++.++++.+++.+.+.. ........||||||||
T Consensus 97 ~~~~~~i~~v~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~-------~~~~~~~~LSgGq~qr 169 (274)
T PRK14265 97 VKLRRQVGMVFQRPNPFPKSIYENIAFAPRANGYKGNLDELVEDSLRRAAIWEEVKD-------KLKEKGTALSGGQQQR 169 (274)
T ss_pred HHHhhcEEEEccCCccccccHHHHHHhHHHhcCchHHHHHHHHHHHHHcccchhhHH-------HhcCCcccCCHHHHHH
Confidence 5678999999999999988999999875210 1 123445667777776554432 2234456899999999
Q ss_pred HHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcCCceEEEEecCchHHhh-cCEEEEEe---------CCEEEE
Q 000789 1188 IAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKN-ADIIAVVK---------NGVIAE 1257 (1283)
Q Consensus 1188 laiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~D~I~vl~---------~G~Ive 1257 (1283)
++|||||+++|++|||||||++||+.+...+.+.|+++.+++|+|+|||+++.+.. ||++++|+ +|++++
T Consensus 170 v~LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~~~~~~~~G~~~~ 249 (274)
T PRK14265 170 LCIARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKEQYTIIMVTHNMQQASRVADWTAFFNTEIDEYGKRRGKLVE 249 (274)
T ss_pred HHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEecccccccccCceEEE
Confidence 99999999999999999999999999999999999998778999999999999865 99999997 899999
Q ss_pred ecChHHHHhccC
Q 000789 1258 QGSHDALMKITD 1269 (1283)
Q Consensus 1258 ~Gt~~eLl~~~~ 1269 (1283)
.|+++++...+.
T Consensus 250 ~g~~~~~~~~~~ 261 (274)
T PRK14265 250 FSPTEQMFGSPQ 261 (274)
T ss_pred eCCHHHHHhCCC
Confidence 999999986533
No 426
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=1.6e-40 Score=367.19 Aligned_cols=213 Identities=36% Similarity=0.537 Sum_probs=176.6
Q ss_pred EEEEEEEEECCCCC-CCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCH---HHHh
Q 000789 375 IELRDVYFRYPARP-EVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQL---KWIR 450 (1283)
Q Consensus 375 i~~~~v~f~y~~~~-~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~---~~~r 450 (1283)
|+++||+++|++.. +.++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+. ..+|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (228)
T cd03257 2 LEVKNLSVSFPTGGGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPTSGSIIFDGKDLLKLSRRLRKIRR 81 (228)
T ss_pred eEEEeeeEeccCCCcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccchhhHHHhh
Confidence 68999999996421 1269999999999999999999999999999999999999999999999999987763 5678
Q ss_pred cccEEEccCC--CCC-cccHHHHHhcCCCCC---CHHHHHHHHHHhcHHHHHHhCCCCcc-ccccCCCCCCChHHHHHHH
Q 000789 451 EKIGLVSQEP--ILF-ATSLRENIAYGKENA---TDQEIRTAIELANAAKFIDKLPKGLD-TMAGEHGTQLSGGQKQRIA 523 (1283)
Q Consensus 451 ~~i~~v~Q~~--~l~-~~ti~~ni~~~~~~~---~~~~~~~~~~~~~~~~~i~~lp~g~~-t~~~~~g~~LSgGqkqria 523 (1283)
++++|++|++ .++ ..|++||+.++.... ..++..+.+ .++.++.+ |+. ........+||||||||++
T Consensus 82 ~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~----~~~~l~~~--~l~~~~~~~~~~~LS~G~~qrv~ 155 (228)
T cd03257 82 KEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGKLSKKEARKEA----VLLLLVGV--GLPEEVLNRYPHELSGGQRQRVA 155 (228)
T ss_pred ccEEEEecCchhhcCCcCCHHHHHHHHHHhccCCcHHHHHHHH----HHHHHHHC--CCChhHhhCCchhcCHHHHHHHH
Confidence 8999999999 344 469999998642111 111111100 12445555 564 4567778899999999999
Q ss_pred HHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhc-cCEEEEEeCCEEeEec
Q 000789 524 IARAILKNPKILLLDEATSALDAESERIVQDALVKIMT--SRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKG 593 (1283)
Q Consensus 524 iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g 593 (1283)
|||||+.+|++|||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 156 laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g 228 (228)
T cd03257 156 IARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLGVVAKIADRVAVMYAGKIVEEG 228 (228)
T ss_pred HHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEeCCEEEecC
Confidence 99999999999999999999999999999999998864 7899999999999874 9999999999998765
No 427
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.1e-40 Score=369.57 Aligned_cols=218 Identities=30% Similarity=0.492 Sum_probs=184.8
Q ss_pred cEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCC-----CCceEEECCcccC-CCCHH
Q 000789 374 EIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDP-----DAGEVLIDGIDIK-KLQLK 447 (1283)
Q Consensus 374 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~-~~~~~ 447 (1283)
.++++|+++.|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.++. ..+..
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~ 79 (249)
T PRK14253 3 KFNIENLDLFYGE---NQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNIDVA 79 (249)
T ss_pred eEEEeccEEEECC---eeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEcccccchH
Confidence 4889999999963 4699999999999999999999999999999999999986 5999999999885 44566
Q ss_pred HHhcccEEEccCCCCCcccHHHHHhcCCCC--CC-H----HHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHH
Q 000789 448 WIREKIGLVSQEPILFATSLRENIAYGKEN--AT-D----QEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQ 520 (1283)
Q Consensus 448 ~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~--~~-~----~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkq 520 (1283)
.+|+.++|++|++.+|+.|++||+.++... .. . +++.++++..++.+ ++.+.....+.+|||||||
T Consensus 80 ~~~~~i~~~~q~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-------~~~~~~~~~~~~LS~G~~q 152 (249)
T PRK14253 80 DLRIKVGMVFQKPNPFPMSIYENVAYGLRAQGIKDKKVLDEVVERSLRGAALWD-------EVKDRLKSHAFGLSGGQQQ 152 (249)
T ss_pred HHHhheeEEecCCCcCcccHHHHHHhHHHhcCCCchHHHHHHHHHHHHHcCCch-------hhhHHhhcCcccCCHHHHH
Confidence 778899999999999999999999876321 11 1 12223333333322 2224456677899999999
Q ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHHh
Q 000789 521 RIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMTSRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDELI 599 (1283)
Q Consensus 521 riaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~ 599 (1283)
|++|||||+.+|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||++++|++|+|++.|+++++.
T Consensus 153 rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 232 (249)
T PRK14253 153 RLCIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKKNYTIVIVTHSMQQARRISDRTAFFLMGELVEHDDTQVIF 232 (249)
T ss_pred HHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999998777899999999999876 9999999999999999999886
Q ss_pred cC
Q 000789 600 KD 601 (1283)
Q Consensus 600 ~~ 601 (1283)
.+
T Consensus 233 ~~ 234 (249)
T PRK14253 233 SN 234 (249)
T ss_pred cC
Confidence 54
No 428
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.6e-40 Score=367.35 Aligned_cols=216 Identities=30% Similarity=0.499 Sum_probs=184.0
Q ss_pred EEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccC------CCCHHH
Q 000789 375 IELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIK------KLQLKW 448 (1283)
Q Consensus 375 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~------~~~~~~ 448 (1283)
|+++|+++.|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++. ..+...
T Consensus 3 l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (242)
T PRK11124 3 IQLNGINCFYGA---HQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDKAIRE 79 (242)
T ss_pred EEEEeeEEEECC---eeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecccccccchhhHHH
Confidence 789999999963 36999999999999999999999999999999999999999999999999873 123456
Q ss_pred HhcccEEEccCCCCCcc-cHHHHHhcCCC---CCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHH
Q 000789 449 IREKIGLVSQEPILFAT-SLRENIAYGKE---NATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAI 524 (1283)
Q Consensus 449 ~r~~i~~v~Q~~~l~~~-ti~~ni~~~~~---~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriai 524 (1283)
+|++|+|++|++.+|.+ |++||+.++.. ....++.. ..+.++++.+ |++........+||||||||++|
T Consensus 80 ~~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~-----~~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrv~l 152 (242)
T PRK11124 80 LRRNVGMVFQQYNLWPHLTVQQNLIEAPCRVLGLSKDQAL-----ARAEKLLERL--RLKPYADRFPLHLSGGQQQRVAI 152 (242)
T ss_pred HHhheEEEecCccccCCCcHHHHHHHHHHHHcCCCHHHHH-----HHHHHHHHHc--CChhhhhCChhhCCHHHHHHHHH
Confidence 78899999999999875 99999975311 11222211 1234556665 77767777788999999999999
Q ss_pred HHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC-CCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHHhc
Q 000789 525 ARAILKNPKILLLDEATSALDAESERIVQDALVKIMT-SRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDELIK 600 (1283)
Q Consensus 525 ARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~-~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~ 600 (1283)
|||++.+|++|||||||++||+++...+.+.|+++.+ ++|+|++||+++.+.. ||++++|++|++++.|+++++.+
T Consensus 153 aral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~~ 230 (242)
T PRK11124 153 ARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVEVARKTASRVVYMENGHIVEQGDASCFTQ 230 (242)
T ss_pred HHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHhcC
Confidence 9999999999999999999999999999999998764 7899999999999865 99999999999999999888753
No 429
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-40 Score=374.93 Aligned_cols=217 Identities=27% Similarity=0.465 Sum_probs=180.8
Q ss_pred EEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccC--CCCHHHHhcc
Q 000789 375 IELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIK--KLQLKWIREK 452 (1283)
Q Consensus 375 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~--~~~~~~~r~~ 452 (1283)
|+++||+++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||+++. +.+...+|++
T Consensus 2 l~~~~l~~~~~~---~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~ 78 (271)
T PRK13638 2 LATSDLWFRYQD---EPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQKGAVLWQGKPLDYSKRGLLALRQQ 78 (271)
T ss_pred eEEEEEEEEcCC---cccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCccEEEECCEEcccccCCHHHHHhh
Confidence 689999999963 35999999999999999999999999999999999999999999999999985 3344567889
Q ss_pred cEEEccCCC--CCcccHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHH
Q 000789 453 IGLVSQEPI--LFATSLRENIAYGKE--NATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARAI 528 (1283)
Q Consensus 453 i~~v~Q~~~--l~~~ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARal 528 (1283)
|+||+|++. ++..|+.+|+.++.. ..+.++..+ .+.+.++.+ |++........+||||||||++|||||
T Consensus 79 i~~v~q~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrl~laraL 151 (271)
T PRK13638 79 VATVFQDPEQQIFYTDIDSDIAFSLRNLGVPEAEITR-----RVDEALTLV--DAQHFRHQPIQCLSHGQKKRVAIAGAL 151 (271)
T ss_pred eEEEeeChhhccccccHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CCHhHhcCCchhCCHHHHHHHHHHHHH
Confidence 999999985 567799999987421 122222211 112233333 444344556679999999999999999
Q ss_pred hcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHHhcC
Q 000789 529 LKNPKILLLDEATSALDAESERIVQDALVKIM-TSRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDELIKD 601 (1283)
Q Consensus 529 ~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~ 601 (1283)
+.+|++|||||||++||+.+...+.+.|+++. +++|+|++||+++.+.. ||++++|++|++++.|+++++...
T Consensus 152 ~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 226 (271)
T PRK13638 152 VLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDIDLIYEISDAVYVLRQGQILTHGAPGEVFAC 226 (271)
T ss_pred HcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 99999999999999999999999999999875 46899999999999865 999999999999999999988754
No 430
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-40 Score=371.74 Aligned_cols=223 Identities=25% Similarity=0.458 Sum_probs=188.2
Q ss_pred cEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHH-hcc
Q 000789 374 EIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWI-REK 452 (1283)
Q Consensus 374 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~-r~~ 452 (1283)
.|+++|+++.|++ .++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|.++...+...+ +..
T Consensus 5 ~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (255)
T PRK11300 5 LLSVSGLMMRFGG---LLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPTGGTILLRGQHIEGLPGHQIARMG 81 (255)
T ss_pred eEEEeeEEEEECC---EEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCcceEEECCEECCCCCHHHHHhcC
Confidence 4899999999963 469999999999999999999999999999999999999999999999999987775544 456
Q ss_pred cEEEccCCCCCcc-cHHHHHhcCCCCCCH----------HHH--HHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHH
Q 000789 453 IGLVSQEPILFAT-SLRENIAYGKENATD----------QEI--RTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQK 519 (1283)
Q Consensus 453 i~~v~Q~~~l~~~-ti~~ni~~~~~~~~~----------~~~--~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqk 519 (1283)
++|++|++.+|.. |++||+.++...... ... ........+.++++.+ |++......+.+||||||
T Consensus 82 i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--gl~~~~~~~~~~LS~G~~ 159 (255)
T PRK11300 82 VVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEALDRAATWLERV--GLLEHANRQAGNLAYGQQ 159 (255)
T ss_pred eEEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHHHHHHHHHHHhC--ChhhhhhCChhhCCHHHH
Confidence 9999999999986 999999986321000 000 0001112234556666 777778888899999999
Q ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChh
Q 000789 520 QRIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMT--SRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHD 596 (1283)
Q Consensus 520 qriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~ 596 (1283)
||++|||||+.+|++|||||||++||+.+.+.+.+.|.++.+ ++|+|++||+++.+.. ||++++|++|++++.|+++
T Consensus 160 qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~ 239 (255)
T PRK11300 160 RRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMKLVMGISDRIYVVNQGTPLANGTPE 239 (255)
T ss_pred HHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEecCCHH
Confidence 999999999999999999999999999999999999998754 6899999999999866 9999999999999999998
Q ss_pred HHhcC
Q 000789 597 ELIKD 601 (1283)
Q Consensus 597 ~l~~~ 601 (1283)
++...
T Consensus 240 ~~~~~ 244 (255)
T PRK11300 240 EIRNN 244 (255)
T ss_pred HHhhC
Confidence 87643
No 431
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=5.2e-40 Score=369.33 Aligned_cols=228 Identities=26% Similarity=0.434 Sum_probs=185.8
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCcc-----CCCCChHH
Q 000789 1039 AIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIE-----LPKFKLSW 1113 (1283)
Q Consensus 1039 ~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~d-----i~~~~~~~ 1113 (1283)
-|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.+ +.+.+...
T Consensus 6 ~l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~i~~~~~~~ 82 (258)
T PRK11701 6 LLSVRGLTKLYGP---RKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPDAGEVHYRMRDGQLRDLYALSEAE 82 (258)
T ss_pred eEEEeeeEEEcCC---ceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCccccccccccCCHHH
Confidence 4899999999974 359999999999999999999999999999999999999999999999998 77766544
Q ss_pred ----HhcceEEEccCCC--CC-hhhHHHHHhcCC--CCCCCHHHHHHHHHHhChHHHHHhCCCCcc-cccCCCCCCCChh
Q 000789 1114 ----LRQQMGLVSQEPV--LF-NETIRTNIAYGK--QGGATEEEIIAATEASNAHNFISALPHGYE-TNVGERGVQLSGG 1183 (1283)
Q Consensus 1114 ----lR~~i~~V~Qdp~--Lf-~gTIreNl~~g~--~~~~sd~ei~~al~~a~l~~~I~~lp~Gld-t~vge~G~~LSgG 1183 (1283)
+|+.++||||++. ++ ..|+.+|+.+.. .......++.+ .+.++++.++ ++ +.....+.+||||
T Consensus 83 ~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-----~~~~~l~~~~--l~~~~~~~~~~~LS~G 155 (258)
T PRK11701 83 RRRLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMAVGARHYGDIRA-----TAGDWLERVE--IDAARIDDLPTTFSGG 155 (258)
T ss_pred HHHHhhcceEEEeeCcccccCccccHHHHHHHHHHHhccCcHHHHHH-----HHHHHHHHcC--CChhHHhCCCccCCHH
Confidence 3567999999984 33 458888885421 01111122211 1345555553 32 3456667799999
Q ss_pred HHHHHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchHHhh-cCEEEEEeCCEEEEecC
Q 000789 1184 QKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMV--NRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGS 1260 (1283)
Q Consensus 1184 QrQRlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt 1260 (1283)
||||++|||||+++|+||||||||++||+.+.+.+.+.|+++.+ +.|+|+|||+++.+.. ||+|++|++|++++.|+
T Consensus 156 q~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~~~~~~~d~i~~l~~g~i~~~~~ 235 (258)
T PRK11701 156 MQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLAVARLLAHRLLVMKQGRVVESGL 235 (258)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999999999988753 7899999999999975 99999999999999999
Q ss_pred hHHHHhccCchhHHHH
Q 000789 1261 HDALMKITDGAYASLV 1276 (1283)
Q Consensus 1261 ~~eLl~~~~g~y~~L~ 1276 (1283)
++++...+...|.+.+
T Consensus 236 ~~~~~~~~~~~~~~~~ 251 (258)
T PRK11701 236 TDQVLDDPQHPYTQLL 251 (258)
T ss_pred HHHHhcCCCCHHHHHH
Confidence 9999875455565443
No 432
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.5e-40 Score=372.00 Aligned_cols=222 Identities=26% Similarity=0.473 Sum_probs=187.2
Q ss_pred ccEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCC-----CCceEEECCcccCCCC-H
Q 000789 373 GEIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDP-----DAGEVLIDGIDIKKLQ-L 446 (1283)
Q Consensus 373 ~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~~~~-~ 446 (1283)
..++++||+++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.++...+ .
T Consensus 20 ~~l~i~nl~~~~~~---~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~ 96 (276)
T PRK14271 20 PAMAAVNLTLGFAG---KTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDV 96 (276)
T ss_pred cEEEEeeEEEEECC---EEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEccccchh
Confidence 35899999999963 3699999999999999999999999999999999999986 7999999999987653 3
Q ss_pred HHHhcccEEEccCCCCCcccHHHHHhcCCC---CCCHHHHHHHHHHhcHHHHHHhC--CCCccccccCCCCCCChHHHHH
Q 000789 447 KWIREKIGLVSQEPILFATSLRENIAYGKE---NATDQEIRTAIELANAAKFIDKL--PKGLDTMAGEHGTQLSGGQKQR 521 (1283)
Q Consensus 447 ~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~---~~~~~~~~~~~~~~~~~~~i~~l--p~g~~t~~~~~g~~LSgGqkqr 521 (1283)
..++++++|++|++.+|+.|++||+.++.. ..+.++..+.+ .+.++.+ +..+++.+.+.+.+||||||||
T Consensus 97 ~~~~~~i~~v~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~-----~~~l~~~~l~~~~~~~l~~~~~~LSgGq~qr 171 (276)
T PRK14271 97 LEFRRRVGMLFQRPNPFPMSIMDNVLAGVRAHKLVPRKEFRGVA-----QARLTEVGLWDAVKDRLSDSPFRLSGGQQQL 171 (276)
T ss_pred HHHhhheEEeccCCccCCccHHHHHHHHHHhccCCCHHHHHHHH-----HHHHHHcCCCchhhhHhhCCcccCCHHHHHH
Confidence 467889999999999999999999997632 12333332211 1223333 2122245667788999999999
Q ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHHhc
Q 000789 522 IAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMTSRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDELIK 600 (1283)
Q Consensus 522 iaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~ 600 (1283)
++|||||+.+|++|||||||++||+.+.+.+.+.|+++.+++|+|+|||+++.+.. ||++++|++|++++.|+++++.+
T Consensus 172 l~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~ 251 (276)
T PRK14271 172 LCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLADRLTVIIVTHNLAQAARISDRAALFFDGRLVEEGPTEQLFS 251 (276)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 99999999999999999999999999999999999988767899999999999875 99999999999999999999987
Q ss_pred CC
Q 000789 601 DP 602 (1283)
Q Consensus 601 ~~ 602 (1283)
.+
T Consensus 252 ~~ 253 (276)
T PRK14271 252 SP 253 (276)
T ss_pred Cc
Confidence 53
No 433
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=3.6e-40 Score=369.89 Aligned_cols=216 Identities=30% Similarity=0.477 Sum_probs=183.4
Q ss_pred EEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHHhcccE
Q 000789 375 IELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWIREKIG 454 (1283)
Q Consensus 375 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 454 (1283)
|+++|++++|++ .++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.++
T Consensus 3 l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (258)
T PRK13548 3 LEARNLSVRLGG---RTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPDSGEVRLNGRPLADWSPAELARRRA 79 (258)
T ss_pred EEEEeEEEEeCC---eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcccCCHHHhhhheE
Confidence 789999999973 35999999999999999999999999999999999999999999999999998877777788999
Q ss_pred EEccCCCC-CcccHHHHHhcCCCCC--CHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHh--
Q 000789 455 LVSQEPIL-FATSLRENIAYGKENA--TDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARAIL-- 529 (1283)
Q Consensus 455 ~v~Q~~~l-~~~ti~~ni~~~~~~~--~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARal~-- 529 (1283)
|++|++.+ +..|++||+.++.... ..++..+ .+.+.++.+ |++........+||||||||++|||||+
T Consensus 80 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgGe~qrv~la~al~~~ 152 (258)
T PRK13548 80 VLPQHSSLSFPFTVEEVVAMGRAPHGLSRAEDDA-----LVAAALAQV--DLAHLAGRDYPQLSGGEQQRVQLARVLAQL 152 (258)
T ss_pred EEccCCcCCCCCCHHHHHHhhhcccCCCcHHHHH-----HHHHHHHHc--CCHhHhcCCcccCCHHHHHHHHHHHHHhcc
Confidence 99999987 5679999998864211 1111111 112333333 5555556667899999999999999999
Q ss_pred ----cCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc--CCCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHHhc
Q 000789 530 ----KNPKILLLDEATSALDAESERIVQDALVKIM--TSRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDELIK 600 (1283)
Q Consensus 530 ----~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~ 600 (1283)
.+|++|||||||++||+.+.+.+.+.|+++. .++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 153 ~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 230 (258)
T PRK13548 153 WEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLNLAARYADRIVLLHQGRLVADGTPAEVLT 230 (258)
T ss_pred cccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhcCEEEEEECCEEEeeCCHHHHhC
Confidence 5999999999999999999999999999875 46899999999999875 99999999999999999988864
No 434
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.5e-40 Score=365.15 Aligned_cols=212 Identities=31% Similarity=0.531 Sum_probs=184.7
Q ss_pred EEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHhcceE
Q 000789 1040 IELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMG 1119 (1283)
Q Consensus 1040 I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~ 1119 (1283)
|+++|++++|++ .+|+|+||+|+|||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+. .|+.++
T Consensus 1 l~~~~l~~~~~~----~~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~p~~G~v~i~g~~~~~~~~--~~~~i~ 74 (235)
T cd03299 1 LKVENLSKDWKE----FKLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIKPDSGKILLNGKDITNLPP--EKRDIS 74 (235)
T ss_pred CeeEeEEEEeCC----ceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcCcCCh--hHcCEE
Confidence 578999999963 27999999999999999999999999999999999999999999999999877654 378999
Q ss_pred EEccCCCCCh-hhHHHHHhcCCC-CCC----CHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHHHH
Q 000789 1120 LVSQEPVLFN-ETIRTNIAYGKQ-GGA----TEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARA 1193 (1283)
Q Consensus 1120 ~V~Qdp~Lf~-gTIreNl~~g~~-~~~----sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiARA 1193 (1283)
|+||++.+|. .|++||+.++.. ... .++++.++++..++.+++.+.| .+||||||||++||||
T Consensus 75 ~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrl~lara 143 (235)
T cd03299 75 YVPQNYALFPHMTVYKNIAYGLKKRKVDKKEIERKVLEIAEMLGIDHLLNRKP-----------ETLSGGEQQRVAIARA 143 (235)
T ss_pred EEeecCccCCCccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhHHhcCc-----------ccCCHHHHHHHHHHHH
Confidence 9999999885 799999986421 111 2345667777777766655443 4799999999999999
Q ss_pred HccCCCEEEEecccCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHHHhcc
Q 000789 1194 VLKNPKILLLDEATSALDAESERVVQDALERVMV--NRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDALMKIT 1268 (1283)
Q Consensus 1194 ll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl~~~ 1268 (1283)
++++|++|+|||||++||+.+.+.+.+.|+++.. ++|+|++||+++.+.. ||+|++|++|++++.|+++++.+.+
T Consensus 144 l~~~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~~~tili~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~ 221 (235)
T cd03299 144 LVVNPKILLLDEPFSALDVRTKEKLREELKKIRKEFGVTVLHVTHDFEEAWALADKVAIMLNGKLIQVGKPEEVFKKP 221 (235)
T ss_pred HHcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHhCc
Confidence 9999999999999999999999999999998753 7899999999999876 9999999999999999999998753
No 435
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.5e-40 Score=372.61 Aligned_cols=220 Identities=30% Similarity=0.506 Sum_probs=185.9
Q ss_pred cEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHHhccc
Q 000789 374 EIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWIREKI 453 (1283)
Q Consensus 374 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 453 (1283)
.|+++|++++|++. ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+...+++++
T Consensus 7 ~l~i~~l~~~~~~~-~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i 85 (269)
T PRK13648 7 IIVFKNVSFQYQSD-ASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKLRKHI 85 (269)
T ss_pred eEEEEEEEEEcCCC-CCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhhe
Confidence 58999999999743 23589999999999999999999999999999999999999999999999999888877888999
Q ss_pred EEEccCCC-CC-cccHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHh
Q 000789 454 GLVSQEPI-LF-ATSLRENIAYGKEN--ATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARAIL 529 (1283)
Q Consensus 454 ~~v~Q~~~-l~-~~ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARal~ 529 (1283)
+|++|++. +| ..|+++|+.++... ...++..+ .+.+.++.+ |+.......+.+||||||||++||||++
T Consensus 86 ~~v~q~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~laral~ 158 (269)
T PRK13648 86 GIVFQNPDNQFVGSIVKYDVAFGLENHAVPYDEMHR-----RVSEALKQV--DMLERADYEPNALSGGQKQRVAIAGVLA 158 (269)
T ss_pred eEEEeChHHhcccccHHHHHHhhHHhcCCCHHHHHH-----HHHHHHHHc--CCchhhhCCcccCCHHHHHHHHHHHHHH
Confidence 99999985 44 56899999886432 12222111 112233333 4444455667899999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhccCEEEEEeCCEEeEecChhHHhcC
Q 000789 530 KNPKILLLDEATSALDAESERIVQDALVKIMT--SRTTVVVAHRLTTIRNADLIAVVHQGKIVEKGTHDELIKD 601 (1283)
Q Consensus 530 ~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~~~l~~~ 601 (1283)
.+|++|||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+..||+|++|++|++++.|+++++...
T Consensus 159 ~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 232 (269)
T PRK13648 159 LNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLSEAMEADHVIVMNKGTVYKEGTPTEIFDH 232 (269)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCchHHhcCCEEEEEECCEEEEecCHHHHhcC
Confidence 99999999999999999999999999998753 6899999999999878999999999999999999998754
No 436
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=1.8e-40 Score=379.98 Aligned_cols=216 Identities=25% Similarity=0.454 Sum_probs=188.0
Q ss_pred EEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHHhcccE
Q 000789 375 IELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWIREKIG 454 (1283)
Q Consensus 375 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 454 (1283)
++++|++++|++ ..+|+|+||++++||++||+||||||||||+++|+|+++|++|+|.++|.++.. +...+++++|
T Consensus 3 l~~~~l~~~~~~---~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~~G~i~i~g~~~~~-~~~~~~~~ig 78 (301)
T TIGR03522 3 IRVSSLTKLYGT---QNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPDSGSVQVCGEDVLQ-NPKEVQRNIG 78 (301)
T ss_pred EEEEEEEEEECC---EEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-ChHHHHhceE
Confidence 789999999963 469999999999999999999999999999999999999999999999999876 3456788999
Q ss_pred EEccCCCCCcc-cHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHhcC
Q 000789 455 LVSQEPILFAT-SLRENIAYGKEN--ATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARAILKN 531 (1283)
Q Consensus 455 ~v~Q~~~l~~~-ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARal~~~ 531 (1283)
|+||++.+|+. |+.||+.+.... ...++..+ .+++.++.+ |++.........||||||||++|||||+++
T Consensus 79 ~~~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrv~la~al~~~ 151 (301)
T TIGR03522 79 YLPEHNPLYLDMYVREYLQFIAGIYGMKGQLLKQ-----RVEEMIELV--GLRPEQHKKIGQLSKGYRQRVGLAQALIHD 151 (301)
T ss_pred EecCCCCCCCCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHC--CCchHhcCchhhCCHHHHHHHHHHHHHhcC
Confidence 99999999976 999999863211 12222211 223455565 777777788889999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHHhcC
Q 000789 532 PKILLLDEATSALDAESERIVQDALVKIMTSRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDELIKD 601 (1283)
Q Consensus 532 ~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~ 601 (1283)
|++|||||||++||+.+.+.+++.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 152 p~lliLDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sH~l~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 222 (301)
T TIGR03522 152 PKVLILDEPTTGLDPNQLVEIRNVIKNIGKDKTIILSTHIMQEVEAICDRVIIINKGKIVADKKLDELSAA 222 (301)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHHh
Confidence 9999999999999999999999999998778999999999999876 999999999999999999998654
No 437
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=1.3e-40 Score=363.98 Aligned_cols=201 Identities=33% Similarity=0.539 Sum_probs=170.0
Q ss_pred EEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHH---HHhc
Q 000789 375 IELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLK---WIRE 451 (1283)
Q Consensus 375 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~---~~r~ 451 (1283)
|+++|++++|++ +.++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++..++.. .+++
T Consensus 2 l~~~~l~~~~~~--~~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (214)
T TIGR02673 2 IEFHNVSKAYPG--GVAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPSRGQVRIAGEDVNRLRGRQLPLLRR 79 (214)
T ss_pred EEEEeeeEEeCC--CceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHHh
Confidence 789999999952 24699999999999999999999999999999999999999999999999999876543 4678
Q ss_pred ccEEEccCCCCCc-ccHHHHHhcCCCC--CC----HHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHH
Q 000789 452 KIGLVSQEPILFA-TSLRENIAYGKEN--AT----DQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAI 524 (1283)
Q Consensus 452 ~i~~v~Q~~~l~~-~ti~~ni~~~~~~--~~----~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriai 524 (1283)
.++|++|++.+|. .|++||+.++... .. ++++.++++..+ +.........+||||||||++|
T Consensus 80 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~-----------l~~~~~~~~~~LS~G~~qrl~l 148 (214)
T TIGR02673 80 RIGVVFQDFRLLPDRTVYENVALPLEVRGKKEREIQRRVGAALRQVG-----------LEHKADAFPEQLSGGEQQRVAI 148 (214)
T ss_pred heEEEecChhhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcC-----------ChhhhhCChhhCCHHHHHHHHH
Confidence 8999999999986 5999999875211 11 123334444443 3333344456899999999999
Q ss_pred HHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhc-cCEEEEEeCCE
Q 000789 525 ARAILKNPKILLLDEATSALDAESERIVQDALVKIM-TSRTTVVVAHRLTTIRN-ADLIAVVHQGK 588 (1283)
Q Consensus 525 ARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~ 588 (1283)
||||+.+|++|||||||++||+.+...+.+.|+++. +++|+|++||+++.+.. ||+|++|++|+
T Consensus 149 a~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~ 214 (214)
T TIGR02673 149 ARAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLSLVDRVAHRVIILDDGR 214 (214)
T ss_pred HHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEecCCC
Confidence 999999999999999999999999999999999875 47899999999999986 99999999985
No 438
>cd03247 ABCC_cytochrome_bd The CYD subfamily implicated in cytochrome bd biogenesis. The CydC and CydD proteins are important for the formation of cytochrome bd terminal oxidase of E. coli and it has been proposed that they were necessary for biosynthesis of the cytochrome bd quinol oxidase and for periplasmic c-type cytochromes. CydCD were proposed to determine a heterooligomeric complex important for heme export into the periplasm or to be involved in the maintenance of the proper redox state of the periplasmic space. In Bacillus subtilius, the absence of CydCD does not affect the presence of halo-cytochrome c in the membrane and this observation suggests that CydCD proteins are not involved in the export of heme in this organism.
Probab=100.00 E-value=1.8e-40 Score=351.33 Aligned_cols=178 Identities=38% Similarity=0.684 Sum_probs=164.8
Q ss_pred EEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHHhcccE
Q 000789 375 IELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWIREKIG 454 (1283)
Q Consensus 375 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 454 (1283)
|+++|++++|++. +.++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.+||.++... ...+++.++
T Consensus 1 i~~~~~~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~-~~~~~~~i~ 78 (178)
T cd03247 1 LSINNVSFSYPEQ-EQQVLKNLSLELKQGEKIALLGRSGSGKSTLLQLLTGDLKPQQGEITLDGVPVSDL-EKALSSLIS 78 (178)
T ss_pred CEEEEEEEEeCCC-CccceEEEEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCEEHHHH-HHHHHhhEE
Confidence 5789999999743 23699999999999999999999999999999999999999999999999988665 556788999
Q ss_pred EEccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHhcCCCE
Q 000789 455 LVSQEPILFATSLRENIAYGKENATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARAILKNPKI 534 (1283)
Q Consensus 455 ~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARal~~~~~i 534 (1283)
|++|++.+|+.|++||+ +.+||||||||++||||++++|++
T Consensus 79 ~~~q~~~~~~~tv~~~i---------------------------------------~~~LS~G~~qrv~laral~~~p~~ 119 (178)
T cd03247 79 VLNQRPYLFDTTLRNNL---------------------------------------GRRFSGGERQRLALARILLQDAPI 119 (178)
T ss_pred EEccCCeeecccHHHhh---------------------------------------cccCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999998 458999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhccCEEEEEeCCEEeEec
Q 000789 535 LLLDEATSALDAESERIVQDALVKIMTSRTTVVVAHRLTTIRNADLIAVVHQGKIVEKG 593 (1283)
Q Consensus 535 lllDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g 593 (1283)
|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+..||++++|++|++++.|
T Consensus 120 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~~~~l~~g~i~~~~ 178 (178)
T cd03247 120 VLLDEPTVGLDPITERQLLSLIFEVLKDKTLIWITHHLTGIEHMDKILFLENGKIIMQG 178 (178)
T ss_pred EEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEecC
Confidence 99999999999999999999999887788999999999999889999999999998764
No 439
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-40 Score=385.24 Aligned_cols=212 Identities=28% Similarity=0.443 Sum_probs=185.0
Q ss_pred EEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCC----ChHHHh
Q 000789 1040 IELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKF----KLSWLR 1115 (1283)
Q Consensus 1040 I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~----~~~~lR 1115 (1283)
|++ ||+++|++. .+ |+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||.++.+. +....|
T Consensus 2 l~~-~l~k~~~~~----~~-~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~~~~~~~~~~~~~~~ 75 (352)
T PRK11144 2 LEL-NFKQQLGDL----CL-TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQKGRIVLNGRVLFDAEKGICLPPEK 75 (352)
T ss_pred eEE-EEEEEeCCE----EE-EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccchhh
Confidence 667 999999642 23 99999999999999999999999999999999999999999999998653 244568
Q ss_pred cceEEEccCCCCCh-hhHHHHHhcCCCCCCCHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHHHHH
Q 000789 1116 QQMGLVSQEPVLFN-ETIRTNIAYGKQGGATEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAV 1194 (1283)
Q Consensus 1116 ~~i~~V~Qdp~Lf~-gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiARAl 1194 (1283)
++++||||++.+|. .|++||+.++.. ...++++.++++..++.++....| .+||||||||++|||||
T Consensus 76 ~~i~~v~q~~~l~~~~tv~enl~~~~~-~~~~~~~~~~l~~~gl~~~~~~~~-----------~~LSgGq~qRvalaraL 143 (352)
T PRK11144 76 RRIGYVFQDARLFPHYKVRGNLRYGMA-KSMVAQFDKIVALLGIEPLLDRYP-----------GSLSGGEKQRVAIGRAL 143 (352)
T ss_pred CCEEEEcCCcccCCCCcHHHHHHhhhh-hhhHHHHHHHHHHcCCchhhhCCc-----------ccCCHHHHHHHHHHHHH
Confidence 89999999999985 699999998632 334567777888877766554443 48999999999999999
Q ss_pred ccCCCEEEEecccCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHHHhccC
Q 000789 1195 LKNPKILLLDEATSALDAESERVVQDALERVMV--NRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDALMKITD 1269 (1283)
Q Consensus 1195 l~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl~~~~ 1269 (1283)
+++|++||||||||+||+.+.+.+.+.|+++.+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++..++.
T Consensus 144 ~~~p~llLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tii~vTHd~~~~~~~~d~i~~l~~G~i~~~g~~~~i~~~p~ 221 (352)
T PRK11144 144 LTAPELLLMDEPLASLDLPRKRELLPYLERLAREINIPILYVSHSLDEILRLADRVVVLEQGKVKAFGPLEEVWASSA 221 (352)
T ss_pred HcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEeCCEEEEecCHHHHHhCcc
Confidence 999999999999999999999999999998754 6899999999998866 99999999999999999999998654
No 440
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=2.6e-40 Score=363.63 Aligned_cols=211 Identities=27% Similarity=0.460 Sum_probs=182.6
Q ss_pred cEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHHhccc
Q 000789 374 EIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWIREKI 453 (1283)
Q Consensus 374 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 453 (1283)
.|+++||++.|++ .++++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.+
T Consensus 7 ~i~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 83 (225)
T PRK10247 7 LLQLQNVGYLAGD---AKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDISTLKPEIYRQQV 83 (225)
T ss_pred eEEEeccEEeeCC---ceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEcCcCCHHHHHhcc
Confidence 5899999999963 3699999999999999999999999999999999999999999999999999888877788899
Q ss_pred EEEccCCCCCcccHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhCCCCcc-ccccCCCCCCChHHHHHHHHHHHHhc
Q 000789 454 GLVSQEPILFATSLRENIAYGKE--NATDQEIRTAIELANAAKFIDKLPKGLD-TMAGEHGTQLSGGQKQRIAIARAILK 530 (1283)
Q Consensus 454 ~~v~Q~~~l~~~ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~lp~g~~-t~~~~~g~~LSgGqkqriaiARal~~ 530 (1283)
+|++|++.+|+.|++||+.++.. ....++ ..+.+.++.+ |+. +.....+.+||||||||++|||||++
T Consensus 84 ~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~-------~~~~~~l~~~--~l~~~~~~~~~~~LS~G~~qrv~laral~~ 154 (225)
T PRK10247 84 SYCAQTPTLFGDTVYDNLIFPWQIRNQQPDP-------AIFLDDLERF--ALPDTILTKNIAELSGGEKQRISLIRNLQF 154 (225)
T ss_pred EEEecccccccccHHHHHHhHHhhcCCChHH-------HHHHHHHHHc--CCChHHhcCCcccCCHHHHHHHHHHHHHhc
Confidence 99999999999999999987421 011110 1123455555 664 45677888999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhccCEEEEEe-CCEEeEecChh
Q 000789 531 NPKILLLDEATSALDAESERIVQDALVKIMT--SRTTVVVAHRLTTIRNADLIAVVH-QGKIVEKGTHD 596 (1283)
Q Consensus 531 ~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~~d~i~vl~-~G~i~~~g~~~ 596 (1283)
+|+++||||||++||+.+.+.+.+.|.++.+ ++|+|++||+++.++.||++++|+ ++..+++|+|+
T Consensus 155 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~~~~~~d~i~~l~~~~~~~~~~~~~ 223 (225)
T PRK10247 155 MPKVLLLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKDEINHADKVITLQPHAGEMQEARYE 223 (225)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChHHHHhCCEEEEEecccchHhhhhhc
Confidence 9999999999999999999999999998753 689999999999998899999995 67778889885
No 441
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=1.4e-40 Score=362.90 Aligned_cols=205 Identities=39% Similarity=0.655 Sum_probs=173.2
Q ss_pred EEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHHhcccEE
Q 000789 376 ELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWIREKIGL 455 (1283)
Q Consensus 376 ~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~ 455 (1283)
+++|++++|++. +.++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.|+|
T Consensus 1 ~~~~l~~~~~~~-~~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 79 (211)
T cd03225 1 ELKNLSFSYPDG-ARPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPTSGEVLVDGKDLTKLSLKELRRKVGL 79 (211)
T ss_pred CceeEEEecCCC-CeeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccCCHHHHHhhceE
Confidence 368999999642 1469999999999999999999999999999999999999999999999999987777778889999
Q ss_pred EccCCC--CCcccHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHhcC
Q 000789 456 VSQEPI--LFATSLRENIAYGKEN--ATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARAILKN 531 (1283)
Q Consensus 456 v~Q~~~--l~~~ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARal~~~ 531 (1283)
++|++. ++..|++||+.++... .+..+..+ .+.+.++.+ |++.........||||||||++|||||+.+
T Consensus 80 ~~q~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~laral~~~ 152 (211)
T cd03225 80 VFQNPDDQFFGPTVEEEVAFGLENLGLPEEEIEE-----RVEEALELV--GLEGLRDRSPFTLSGGQKQRVAIAGVLAMD 152 (211)
T ss_pred EecChhhhcCCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CcHhhhcCCcccCCHHHHHHHHHHHHHhcC
Confidence 999983 5678999999875321 12221111 122344444 555556667789999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHcC-CCeEEEEecCchhhhc-cCEEEEEeCCE
Q 000789 532 PKILLLDEATSALDAESERIVQDALVKIMT-SRTTVVVAHRLTTIRN-ADLIAVVHQGK 588 (1283)
Q Consensus 532 ~~illlDE~ts~lD~~~~~~i~~~l~~~~~-~~t~i~itH~l~~~~~-~d~i~vl~~G~ 588 (1283)
|++|||||||++||+.+++.+.+.|.++.+ ++|+|++||+++.+.. ||+|++|++|+
T Consensus 153 p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~G~ 211 (211)
T cd03225 153 PDILLLDEPTAGLDPAGRRELLELLKKLKAEGKTIIIVTHDLDLLLELADRVIVLEDGK 211 (211)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCC
Confidence 999999999999999999999999998764 7899999999999987 99999999985
No 442
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3e-40 Score=382.01 Aligned_cols=230 Identities=24% Similarity=0.387 Sum_probs=187.0
Q ss_pred cEEEEEEEEECCCC-CCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCC----CCCceEEECCcccCCCCHHH
Q 000789 374 EIELRDVYFRYPAR-PEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYD----PDAGEVLIDGIDIKKLQLKW 448 (1283)
Q Consensus 374 ~i~~~~v~f~y~~~-~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~----~~~G~i~~~g~~~~~~~~~~ 448 (1283)
-|+++|++++|+.. ....+|+||||+|++||+++|+|+||||||||+++|+|+.+ |++|+|.+||+++..++...
T Consensus 3 ~L~v~~l~~~y~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~ 82 (330)
T PRK15093 3 LLDIRNLTIEFKTSDGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRE 82 (330)
T ss_pred eEEEeeeEEEEeCCCCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHH
Confidence 37899999999632 12469999999999999999999999999999999999986 58999999999998887655
Q ss_pred Hh----cccEEEccCCC--CCc-ccHHHHHhcCCC---CC-----CHHHHHHHHHHhcHHHHHHhCCCCcc---ccccCC
Q 000789 449 IR----EKIGLVSQEPI--LFA-TSLRENIAYGKE---NA-----TDQEIRTAIELANAAKFIDKLPKGLD---TMAGEH 510 (1283)
Q Consensus 449 ~r----~~i~~v~Q~~~--l~~-~ti~~ni~~~~~---~~-----~~~~~~~~~~~~~~~~~i~~lp~g~~---t~~~~~ 510 (1283)
++ +.|+||+|++. +++ .||.+|+..... .. ...+. ...+.+.++.+ |++ ......
T Consensus 83 ~~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~-----~~~~~~~L~~~--gL~~~~~~~~~~ 155 (330)
T PRK15093 83 RRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWR-----KRRAIELLHRV--GIKDHKDAMRSF 155 (330)
T ss_pred HHHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhhhccccccccHHHH-----HHHHHHHHHHC--CCCChHHHHhCC
Confidence 43 47999999996 333 489999864211 00 00111 11223444444 453 234566
Q ss_pred CCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhc-cCEEEEEeCC
Q 000789 511 GTQLSGGQKQRIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMT--SRTTVVVAHRLTTIRN-ADLIAVVHQG 587 (1283)
Q Consensus 511 g~~LSgGqkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G 587 (1283)
+.+||||||||++|||||+.+|++|||||||++||+.+...+.+.|+++.+ +.|+|+|||+++.+.. ||+|++|++|
T Consensus 156 p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~~v~~~~dri~vm~~G 235 (330)
T PRK15093 156 PYELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQMLSQWADKINVLYCG 235 (330)
T ss_pred chhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECC
Confidence 789999999999999999999999999999999999999999999999864 6899999999999976 9999999999
Q ss_pred EEeEecChhHHhcCCCChhHHHH
Q 000789 588 KIVEKGTHDELIKDPEGPYTQLV 610 (1283)
Q Consensus 588 ~i~~~g~~~~l~~~~~~~~~~~~ 610 (1283)
+|++.|+.+++..++...|.+.+
T Consensus 236 ~ive~g~~~~i~~~p~~~y~~~l 258 (330)
T PRK15093 236 QTVETAPSKELVTTPHHPYTQAL 258 (330)
T ss_pred EEEEECCHHHHHhCCCCHHHHHH
Confidence 99999999999887667776643
No 443
>PRK14264 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.9e-40 Score=376.80 Aligned_cols=220 Identities=29% Similarity=0.480 Sum_probs=187.7
Q ss_pred ccEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCC-----CCcceEEECCccCCCC--C
Q 000789 1038 GAIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYD-----PDSGHVLLDNIELPKF--K 1110 (1283)
Q Consensus 1038 g~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~-----~~~G~I~idG~di~~~--~ 1110 (1283)
..|+++||+++|++ .++|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.+||.++... +
T Consensus 44 ~~l~i~nl~~~~~~---~~iL~~is~~i~~Ge~~~IvG~nGsGKSTLl~~L~Gl~~~~~~~p~~G~I~i~g~~i~~~~~~ 120 (305)
T PRK14264 44 AKLSVEDLDVYYGD---DHALKGVSMDIPEKSVTALIGPSGCGKSTFLRCLNRMNDRIKAARIDGSVELDGQDIYQDGVN 120 (305)
T ss_pred ceEEEEEEEEEeCC---eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccc
Confidence 36999999999974 359999999999999999999999999999999999986 6899999999998653 4
Q ss_pred hHHHhcceEEEccCCCCChhhHHHHHhcCCCC------------------CCCHHHHHHHHHHhChHHHHHhCCCCcccc
Q 000789 1111 LSWLRQQMGLVSQEPVLFNETIRTNIAYGKQG------------------GATEEEIIAATEASNAHNFISALPHGYETN 1172 (1283)
Q Consensus 1111 ~~~lR~~i~~V~Qdp~Lf~gTIreNl~~g~~~------------------~~sd~ei~~al~~a~l~~~I~~lp~Gldt~ 1172 (1283)
...+|+.++||||++.+|++|++||+.++... ...++++.++++.+++.+ ++++.
T Consensus 121 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~~~~~ 193 (305)
T PRK14264 121 LVELRKRVGMVFQSPNPFPKSIRENISYGPRKHGDINTGLLARLLGRDDKDAEDELVERSLRQAALWD-------EVNDR 193 (305)
T ss_pred HHHHhhceEEEccCCccccccHHHHHHhHHhhcccccccccccccccCchHHHHHHHHHHHHHcCCch-------hhhHH
Confidence 56788999999999999999999999865210 011234555666555533 33344
Q ss_pred cCCCCCCCChhHHHHHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcCCceEEEEecCchHHhh-cCEE-EEE
Q 000789 1173 VGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKN-ADII-AVV 1250 (1283)
Q Consensus 1173 vge~G~~LSgGQrQRlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHrl~ti~~-~D~I-~vl 1250 (1283)
+.....+||||||||++|||||+++|+||||||||++||+.+...+.+.|+++.+++|+|+|||+++.+.. ||++ ++|
T Consensus 194 ~~~~~~~LSgGq~qrv~LAraL~~~p~lLLLDEPtsgLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~i~~~~d~i~~~l 273 (305)
T PRK14264 194 LDDNALGLSGGQQQRLCIARCLAVDPEVILMDEPASALDPIATSKIEDLIEELAEEYTVVVVTHNMQQAARISDQTAVFL 273 (305)
T ss_pred hcCccccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEe
Confidence 56667799999999999999999999999999999999999999999999998777899999999999866 9997 567
Q ss_pred eCCEEEEecChHHHHhc
Q 000789 1251 KNGVIAEQGSHDALMKI 1267 (1283)
Q Consensus 1251 ~~G~Ive~Gt~~eLl~~ 1267 (1283)
++|++++.|+++++.+.
T Consensus 274 ~~G~i~~~g~~~~~~~~ 290 (305)
T PRK14264 274 TGGELVEYDDTDKIFEN 290 (305)
T ss_pred cCCEEEEeCCHHHHHhC
Confidence 99999999999999764
No 444
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=4.1e-40 Score=370.40 Aligned_cols=213 Identities=27% Similarity=0.387 Sum_probs=183.8
Q ss_pred EEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCC--------cceEEECCccCCCCCh
Q 000789 1040 IELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPD--------SGHVLLDNIELPKFKL 1111 (1283)
Q Consensus 1040 I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~--------~G~I~idG~di~~~~~ 1111 (1283)
|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|.+||.++...+.
T Consensus 2 l~~~nl~~~~~~---~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~ 78 (272)
T PRK13547 2 LTADHLHVARRH---RAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDA 78 (272)
T ss_pred eEEEEEEEEECC---EeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCH
Confidence 789999999964 35999999999999999999999999999999999999998 9999999999988888
Q ss_pred HHHhcceEEEccCCC-CChhhHHHHHhcCCCCC------CC---HHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCC
Q 000789 1112 SWLRQQMGLVSQEPV-LFNETIRTNIAYGKQGG------AT---EEEIIAATEASNAHNFISALPHGYETNVGERGVQLS 1181 (1283)
Q Consensus 1112 ~~lR~~i~~V~Qdp~-Lf~gTIreNl~~g~~~~------~s---d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LS 1181 (1283)
..+|+.++||||++. +|..|++||+.++.... .+ ++.+.++++..++ ++.++.....||
T Consensus 79 ~~~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l-----------~~~~~~~~~~LS 147 (272)
T PRK13547 79 PRLARLRAVLPQAAQPAFAFSAREIVLLGRYPHARRAGALTHRDGEIAWQALALAGA-----------TALVGRDVTTLS 147 (272)
T ss_pred HHHHhhcEEecccCCCCCCCcHHHHHhhcccccccccccCCHHHHHHHHHHHHHcCc-----------HhhhcCCcccCC
Confidence 888889999999986 67899999998752110 11 2234455555544 334445566899
Q ss_pred hhHHHHHHHHHHHc---------cCCCEEEEecccCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchHHhh-cCEEEE
Q 000789 1182 GGQKQRIAIARAVL---------KNPKILLLDEATSALDAESERVVQDALERVMV--NRTTVVVAHRLTTIKN-ADIIAV 1249 (1283)
Q Consensus 1182 gGQrQRlaiARAll---------~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~D~I~v 1249 (1283)
||||||++|||||+ .+|++|||||||++||+.+...+.+.|+++.+ ++|+|+|||+++.+.. ||++++
T Consensus 148 gG~~qrv~laral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~~~~~~~d~i~~ 227 (272)
T PRK13547 148 GGELARVQFARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPNLAARHADRIAM 227 (272)
T ss_pred HHHHHHHHHHHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEE
Confidence 99999999999999 59999999999999999999999999998753 6899999999999965 999999
Q ss_pred EeCCEEEEecChHHHHh
Q 000789 1250 VKNGVIAEQGSHDALMK 1266 (1283)
Q Consensus 1250 l~~G~Ive~Gt~~eLl~ 1266 (1283)
|++|++++.|++++++.
T Consensus 228 l~~G~i~~~g~~~~~~~ 244 (272)
T PRK13547 228 LADGAIVAHGAPADVLT 244 (272)
T ss_pred EECCeEEEecCHHHHcC
Confidence 99999999999999865
No 445
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=2e-40 Score=362.38 Aligned_cols=202 Identities=35% Similarity=0.533 Sum_probs=170.9
Q ss_pred EEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCC--CChHHHhcc
Q 000789 1040 IELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPK--FKLSWLRQQ 1117 (1283)
Q Consensus 1040 I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~--~~~~~lR~~ 1117 (1283)
|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++.. .+...+|++
T Consensus 1 l~~~~l~~~~~~---~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 77 (213)
T cd03262 1 IEIKNLHKSFGD---FHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPDSGTIIIDGLKLTDDKKNINELRQK 77 (213)
T ss_pred CEEEEEEEEECC---eEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccchhHHHHHhc
Confidence 578999999974 359999999999999999999999999999999999999999999999999853 345667899
Q ss_pred eEEEccCCCCCh-hhHHHHHhcCCC--CCCCH----HHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHH
Q 000789 1118 MGLVSQEPVLFN-ETIRTNIAYGKQ--GGATE----EEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAI 1190 (1283)
Q Consensus 1118 i~~V~Qdp~Lf~-gTIreNl~~g~~--~~~sd----~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlai 1190 (1283)
++|+||+|.+|. .|++||+.++.. .+.+. +++.++++..++.+.+ .....+||||||||++|
T Consensus 78 i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrv~l 146 (213)
T cd03262 78 VGMVFQQFNLFPHLTVLENITLAPIKVKGMSKAEAEERALELLEKVGLADKA-----------DAYPAQLSGGQQQRVAI 146 (213)
T ss_pred ceEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHcCCHhHh-----------hhCccccCHHHHHHHHH
Confidence 999999999886 699999976421 12222 2344445555544433 33345899999999999
Q ss_pred HHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchHHhh-cCEEEEEeCCEE
Q 000789 1191 ARAVLKNPKILLLDEATSALDAESERVVQDALERVM-VNRTTVVVAHRLTTIKN-ADIIAVVKNGVI 1255 (1283)
Q Consensus 1191 ARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHrl~ti~~-~D~I~vl~~G~I 1255 (1283)
|||++++|++|||||||++||+++.+.+.+.|+++. .++|+|++||+++.+.. ||+|++|++|++
T Consensus 147 a~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~~~~~~~d~i~~l~~g~i 213 (213)
T cd03262 147 ARALAMNPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMGFAREVADRVIFMDDGRI 213 (213)
T ss_pred HHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 999999999999999999999999999999999875 47899999999999976 999999999975
No 446
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=4.4e-40 Score=369.96 Aligned_cols=225 Identities=31% Similarity=0.485 Sum_probs=187.3
Q ss_pred cEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcc-----cCCCCHHH
Q 000789 374 EIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGID-----IKKLQLKW 448 (1283)
Q Consensus 374 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~-----~~~~~~~~ 448 (1283)
.|+++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|++ +.+.+...
T Consensus 6 ~l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~i~~~~~~~ 82 (258)
T PRK11701 6 LLSVRGLTKLYGP---RKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPDAGEVHYRMRDGQLRDLYALSEAE 82 (258)
T ss_pred eEEEeeeEEEcCC---ceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCccccccccccCCHHH
Confidence 4899999999964 369999999999999999999999999999999999999999999999998 77666543
Q ss_pred ----HhcccEEEccCCC--CCc-ccHHHHHhcCC---CCCCHHHHHHHHHHhcHHHHHHhCCCCcc-ccccCCCCCCChH
Q 000789 449 ----IREKIGLVSQEPI--LFA-TSLRENIAYGK---ENATDQEIRTAIELANAAKFIDKLPKGLD-TMAGEHGTQLSGG 517 (1283)
Q Consensus 449 ----~r~~i~~v~Q~~~--l~~-~ti~~ni~~~~---~~~~~~~~~~~~~~~~~~~~i~~lp~g~~-t~~~~~g~~LSgG 517 (1283)
.++.++||+|++. ++. .|+.+|+.+.. ......+.. ..++++++.+ |++ +..++.+.+||||
T Consensus 83 ~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~~LS~G 155 (258)
T PRK11701 83 RRRLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMAVGARHYGDIR-----ATAGDWLERV--EIDAARIDDLPTTFSGG 155 (258)
T ss_pred HHHHhhcceEEEeeCcccccCccccHHHHHHHHHHHhccCcHHHHH-----HHHHHHHHHc--CCChhHHhCCCccCCHH
Confidence 3567999999984 343 48899986521 111112221 1235667777 554 4678888999999
Q ss_pred HHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhc-cCEEEEEeCCEEeEecC
Q 000789 518 QKQRIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMT--SRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGT 594 (1283)
Q Consensus 518 qkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~ 594 (1283)
||||++|||||+.+|++|||||||++||+.+.+.+.+.|+++.+ +.|+|+|||+++.+.. ||+|++|++|++++.|+
T Consensus 156 q~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~~~~~~~d~i~~l~~g~i~~~~~ 235 (258)
T PRK11701 156 MQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLAVARLLAHRLLVMKQGRVVESGL 235 (258)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999999999998754 6899999999999975 99999999999999999
Q ss_pred hhHHhcCCCChhHH
Q 000789 595 HDELIKDPEGPYTQ 608 (1283)
Q Consensus 595 ~~~l~~~~~~~~~~ 608 (1283)
++++..++...|.+
T Consensus 236 ~~~~~~~~~~~~~~ 249 (258)
T PRK11701 236 TDQVLDDPQHPYTQ 249 (258)
T ss_pred HHHHhcCCCCHHHH
Confidence 99998664444443
No 447
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.1e-40 Score=371.09 Aligned_cols=220 Identities=30% Similarity=0.489 Sum_probs=185.6
Q ss_pred ccEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCC-----CCceEEECCcccCC--CC
Q 000789 373 GEIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDP-----DAGEVLIDGIDIKK--LQ 445 (1283)
Q Consensus 373 ~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~~--~~ 445 (1283)
+.|+++||+++|++ .++|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.+||+++.. .+
T Consensus 6 ~~l~~~~l~~~~~~---~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~ 82 (259)
T PRK14260 6 PAIKVKDLSFYYNT---SKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFGQNIYDPRIN 82 (259)
T ss_pred ceEEEEEEEEEECC---eEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECCEeccccccc
Confidence 36999999999963 3599999999999999999999999999999999999985 48999999998854 34
Q ss_pred HHHHhcccEEEccCCCCCcccHHHHHhcCCCC---CCH----HHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHH
Q 000789 446 LKWIREKIGLVSQEPILFATSLRENIAYGKEN---ATD----QEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQ 518 (1283)
Q Consensus 446 ~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~---~~~----~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGq 518 (1283)
...++++++||+|++.+|+.|++||+.++... ..+ +.+.++++.+++.+++. ......+..|||||
T Consensus 83 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LS~G~ 155 (259)
T PRK14260 83 INRLRRQIGMVFQRPNPFPMSIYENVAYGVRISAKLPQADLDEIVESALKGAALWQEVK-------DKLNKSALGLSGGQ 155 (259)
T ss_pred hHhhhhheEEEecccccCCccHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcchhh-------hHhcCCcccCCHHH
Confidence 55678899999999999999999999875311 111 22344444444433222 23456778999999
Q ss_pred HHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhc-cCEEEEEe-----CCEEeEe
Q 000789 519 KQRIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMTSRTTVVVAHRLTTIRN-ADLIAVVH-----QGKIVEK 592 (1283)
Q Consensus 519 kqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~-----~G~i~~~ 592 (1283)
|||++|||||+++|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||++++|+ +|++++.
T Consensus 156 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~i~~~~d~i~~l~~~~~~~G~i~~~ 235 (259)
T PRK14260 156 QQRLCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRSELTIAIVTHNMQQATRVSDFTAFFSTDESRIGQMVEF 235 (259)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCeEEEEeccCCCCceEEEe
Confidence 99999999999999999999999999999999999999998777899999999999876 99999998 5999999
Q ss_pred cChhHHhcCC
Q 000789 593 GTHDELIKDP 602 (1283)
Q Consensus 593 g~~~~l~~~~ 602 (1283)
|+++++.+.+
T Consensus 236 ~~~~~~~~~~ 245 (259)
T PRK14260 236 GVTTQIFSNP 245 (259)
T ss_pred CCHHHHhcCC
Confidence 9999987653
No 448
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.1e-40 Score=372.95 Aligned_cols=220 Identities=31% Similarity=0.511 Sum_probs=183.8
Q ss_pred cccEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCC-----CCCceEEECCcccCC--C
Q 000789 372 EGEIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYD-----PDAGEVLIDGIDIKK--L 444 (1283)
Q Consensus 372 ~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~~~g~~~~~--~ 444 (1283)
+..|+++||+++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|+++.. .
T Consensus 37 ~~~l~i~~l~~~~~~---~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G~~i~~~~~ 113 (285)
T PRK14254 37 ETVIEARDLNVFYGD---EQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRGKNVYDADV 113 (285)
T ss_pred CceEEEEEEEEEECC---EeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEcccccc
Confidence 345999999999963 369999999999999999999999999999999999997 689999999999864 3
Q ss_pred CHHHHhcccEEEccCCCCCcccHHHHHhcCCCC--CC---HHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHH
Q 000789 445 QLKWIREKIGLVSQEPILFATSLRENIAYGKEN--AT---DQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQK 519 (1283)
Q Consensus 445 ~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~--~~---~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqk 519 (1283)
+...++++++||+|++.+|+.|++||+.++... .. .+++.++++..++.+.+ .....+++.+||||||
T Consensus 114 ~~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i-------~~~~~~~~~~LSgGe~ 186 (285)
T PRK14254 114 DPVALRRRIGMVFQKPNPFPKSIYDNVAYGLKIQGYDGDIDERVEESLRRAALWDEV-------KDQLDSSGLDLSGGQQ 186 (285)
T ss_pred chHhhhccEEEEecCCccCcCCHHHHHHHHHHHcCCcHHHHHHHHHHHHHcCCCchh-------HHHHhCCcccCCHHHH
Confidence 455678899999999999988999999875311 11 12233333333322111 2245677789999999
Q ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhc-cCEEE-EEeCCEEeEecChhH
Q 000789 520 QRIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMTSRTTVVVAHRLTTIRN-ADLIA-VVHQGKIVEKGTHDE 597 (1283)
Q Consensus 520 qriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~-vl~~G~i~~~g~~~~ 597 (1283)
||++|||||+++|+||||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||+++ +|++|+|++.|++++
T Consensus 187 qrv~LAraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~~~tiii~tH~~~~i~~~~dri~v~l~~G~i~~~g~~~~ 266 (285)
T PRK14254 187 QRLCIARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAEEYTVVIVTHNMQQAARISDKTAVFLTGGELVEFDDTDK 266 (285)
T ss_pred HHHHHHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEeeCCEEEEeCCHHH
Confidence 9999999999999999999999999999999999999998777899999999999876 99975 579999999999999
Q ss_pred HhcC
Q 000789 598 LIKD 601 (1283)
Q Consensus 598 l~~~ 601 (1283)
+..+
T Consensus 267 ~~~~ 270 (285)
T PRK14254 267 IFEN 270 (285)
T ss_pred HHhC
Confidence 8754
No 449
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-40 Score=375.98 Aligned_cols=225 Identities=29% Similarity=0.462 Sum_probs=185.3
Q ss_pred ccEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCC-----CCCceEEECCcccCCC--C
Q 000789 373 GEIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYD-----PDAGEVLIDGIDIKKL--Q 445 (1283)
Q Consensus 373 ~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~~~g~~~~~~--~ 445 (1283)
..|+++||+++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+.+ |++|+|.+||+++... +
T Consensus 38 ~~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g~~i~~~~~~ 114 (286)
T PRK14275 38 PHVVAKNFSIYYGE---FEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDGEDIYGKFTD 114 (286)
T ss_pred eEEEEeeeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECCEEhhhcccc
Confidence 45899999999963 359999999999999999999999999999999999864 4999999999988643 2
Q ss_pred HHHHhcccEEEccCCCCCcccHHHHHhcCCCC--C-CH----HHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHH
Q 000789 446 LKWIREKIGLVSQEPILFATSLRENIAYGKEN--A-TD----QEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQ 518 (1283)
Q Consensus 446 ~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~--~-~~----~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGq 518 (1283)
...+|++++||+|++.+|+.|+.||+.++... . +. +++.++++..++.+ ++.......+..|||||
T Consensus 115 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~l~~~~~~~~~~LSgGq 187 (286)
T PRK14275 115 EVLLRKKIGMVFQKPNPFPKSIFDNIAYGPRLHGINDKKQLEEIVEKSLRKAALWD-------EVSDRLDKNALGLSGGQ 187 (286)
T ss_pred hHHhhhcEEEECCCCCCCccCHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHhCCcc-------chhhHhhCChhhCCHHH
Confidence 34568899999999999988999999986321 1 11 12223333332211 11233456778999999
Q ss_pred HHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhH
Q 000789 519 KQRIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMTSRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDE 597 (1283)
Q Consensus 519 kqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~ 597 (1283)
|||++|||||+.+|++|||||||++||+++.+.+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|++++
T Consensus 188 ~qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tvIivsH~~~~~~~~~d~i~~L~~G~i~~~g~~~~ 267 (286)
T PRK14275 188 QQRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRGSYTIMIVTHNMQQASRVSDYTMFFYEGVLVEHAPTAQ 267 (286)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999998777899999999999875 99999999999999999999
Q ss_pred HhcCCCChhH
Q 000789 598 LIKDPEGPYT 607 (1283)
Q Consensus 598 l~~~~~~~~~ 607 (1283)
+.+++...+.
T Consensus 268 ~~~~~~~~~~ 277 (286)
T PRK14275 268 LFTNPKDRMT 277 (286)
T ss_pred HHhCCCcHHH
Confidence 9865443333
No 450
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-40 Score=371.84 Aligned_cols=214 Identities=27% Similarity=0.453 Sum_probs=184.7
Q ss_pred ccEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHHhcc
Q 000789 373 GEIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWIREK 452 (1283)
Q Consensus 373 ~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~ 452 (1283)
..|+++||+++|++ ..+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+...+++.
T Consensus 6 ~~l~i~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 82 (265)
T PRK10253 6 ARLRGEQLTLGYGK---YTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPAHGHVWLDGEHIQHYASKEVARR 82 (265)
T ss_pred cEEEEEEEEEEECC---EEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEEhhhCCHHHHhhh
Confidence 46999999999973 359999999999999999999999999999999999999999999999999988887778889
Q ss_pred cEEEccCCCCCc-ccHHHHHhcCC-CC------CCH---HHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHH
Q 000789 453 IGLVSQEPILFA-TSLRENIAYGK-EN------ATD---QEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQR 521 (1283)
Q Consensus 453 i~~v~Q~~~l~~-~ti~~ni~~~~-~~------~~~---~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqr 521 (1283)
++|++|++.+|. .|++||+.++. +. ..+ +++.++++.. |++......+.+||||||||
T Consensus 83 i~~v~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----------~l~~~~~~~~~~LS~Gq~qr 151 (265)
T PRK10253 83 IGLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQAT-----------GITHLADQSVDTLSGGQRQR 151 (265)
T ss_pred eEEeeccCcCCCCCcHHHHHHhCcccccccccCCCHHHHHHHHHHHHHc-----------CCHHHhcCCcccCChHHHHH
Confidence 999999998875 59999998753 11 011 1233333333 44444556678999999999
Q ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHH
Q 000789 522 IAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMT--SRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDEL 598 (1283)
Q Consensus 522 iaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l 598 (1283)
++||||++++|++|||||||++||+.+.+.+.+.|.++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 152 v~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 231 (265)
T PRK10253 152 AWIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLNQACRYASHLIALREGKIVAQGAPKEI 231 (265)
T ss_pred HHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999998754 6899999999998865 999999999999999999887
Q ss_pred hc
Q 000789 599 IK 600 (1283)
Q Consensus 599 ~~ 600 (1283)
..
T Consensus 232 ~~ 233 (265)
T PRK10253 232 VT 233 (265)
T ss_pred hh
Confidence 64
No 451
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=2e-40 Score=362.65 Aligned_cols=206 Identities=33% Similarity=0.533 Sum_probs=171.6
Q ss_pred EEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCH---HHHhc
Q 000789 375 IELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQL---KWIRE 451 (1283)
Q Consensus 375 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~---~~~r~ 451 (1283)
|+++|++++|++. .++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|+++...+. ...|+
T Consensus 1 l~~~~l~~~~~~~--~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 78 (214)
T cd03292 1 IEFINVTKTYPNG--TAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPTSGTIRVNGQDVSDLRGRAIPYLRR 78 (214)
T ss_pred CEEEEEEEEeCCC--ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcccCCHHHHHHHHH
Confidence 4789999999642 359999999999999999999999999999999999999999999999999877654 34678
Q ss_pred ccEEEccCCCCCcc-cHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHH
Q 000789 452 KIGLVSQEPILFAT-SLRENIAYGKE--NATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARAI 528 (1283)
Q Consensus 452 ~i~~v~Q~~~l~~~-ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARal 528 (1283)
.++|++|++.+|+. |++||+.++.. ..+.++..+ .+.+.++.+ |++........+||||||||++|||||
T Consensus 79 ~i~~v~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~laral 151 (214)
T cd03292 79 KIGVVFQDFRLLPDRNVYENVAFALEVTGVPPREIRK-----RVPAALELV--GLSHKHRALPAELSGGEQQRVAIARAI 151 (214)
T ss_pred heEEEecCchhccCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CCHHHhhCChhhcCHHHHHHHHHHHHH
Confidence 89999999999985 99999987532 112221111 112333333 444444555679999999999999999
Q ss_pred hcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhc-cCEEEEEeCCEE
Q 000789 529 LKNPKILLLDEATSALDAESERIVQDALVKIM-TSRTTVVVAHRLTTIRN-ADLIAVVHQGKI 589 (1283)
Q Consensus 529 ~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i 589 (1283)
+.+|+++||||||++||+++.+.+.+.|+++. +++|+|++||+++.+.. ||+|++|++|++
T Consensus 152 ~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~~ 214 (214)
T cd03292 152 VNSPTILIADEPTGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKELVDTTRHRVIALERGKL 214 (214)
T ss_pred HcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999999999874 47899999999999986 999999999974
No 452
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=1.3e-40 Score=363.50 Aligned_cols=202 Identities=28% Similarity=0.497 Sum_probs=166.4
Q ss_pred EEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHHhcccEE
Q 000789 376 ELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWIREKIGL 455 (1283)
Q Consensus 376 ~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~ 455 (1283)
+++||+++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++. .++++++|
T Consensus 1 ~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~-----~~~~~i~~ 72 (213)
T cd03235 1 EVEDLTVSYGG---HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPTSGSIRVFGKPLE-----KERKRIGY 72 (213)
T ss_pred CcccceeEECC---EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCccHH-----HHHhheEE
Confidence 36899999963 35999999999999999999999999999999999999999999999998764 46778999
Q ss_pred EccCCCC---CcccHHHHHhcCCCCC------CHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHH
Q 000789 456 VSQEPIL---FATSLRENIAYGKENA------TDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIAR 526 (1283)
Q Consensus 456 v~Q~~~l---~~~ti~~ni~~~~~~~------~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiAR 526 (1283)
|+|++.+ ++.|++||+.++.... ..++.. ..+.+.++.+ |++........+||||||||++|||
T Consensus 73 v~q~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la~ 145 (213)
T cd03235 73 VPQRRSIDRDFPISVRDVVLMGLYGHKGLFRRLSKADK-----AKVDEALERV--GLSELADRQIGELSGGQQQRVLLAR 145 (213)
T ss_pred eccccccccCCCCcHHHHHHhccccccccccCCCHHHH-----HHHHHHHHHc--CCHHHHhCCcccCCHHHHHHHHHHH
Confidence 9999976 5679999998864311 011110 1122333333 4444445566799999999999999
Q ss_pred HHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhc-cCEEEEEeCCEEeEec
Q 000789 527 AILKNPKILLLDEATSALDAESERIVQDALVKIM-TSRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKG 593 (1283)
Q Consensus 527 al~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g 593 (1283)
||+.+|++|||||||++||+.+.+.+.+.|+++. +++|+|++||+++.+.. ||+|++|++| +++.|
T Consensus 146 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~~-~~~~g 213 (213)
T cd03235 146 ALVQDPDLLLLDEPFAGVDPKTQEDIYELLRELRREGMTILVVTHDLGLVLEYFDRVLLLNRT-VVASG 213 (213)
T ss_pred HHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEcCc-EeecC
Confidence 9999999999999999999999999999999875 56899999999999876 9999999986 55544
No 453
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=2.9e-40 Score=385.96 Aligned_cols=235 Identities=33% Similarity=0.534 Sum_probs=190.6
Q ss_pred ccEEEEEEEEECCCC--------CCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCccc--C
Q 000789 373 GEIELRDVYFRYPAR--------PEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDI--K 442 (1283)
Q Consensus 373 ~~i~~~~v~f~y~~~--------~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~--~ 442 (1283)
.-++++|+++.|..+ ....+++||||++++||++||||+||||||||.++|+|+.+|++|+|.++|.|. +
T Consensus 279 ~ll~V~~l~k~y~~~~~~~~~~~~~~~Av~~VSf~l~~GE~lglVGeSGsGKSTlar~i~gL~~P~~G~i~~~g~~~~~~ 358 (539)
T COG1123 279 PLLSVRNLSKRYGSRKGLFVRERGEVKAVDDVSFDLREGETLGLVGESGSGKSTLARILAGLLPPSSGSIIFDGQDLDLT 358 (539)
T ss_pred ceeEeeeeeeeeccccccccccccceeeeeeeeeEecCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEEeCcccccc
Confidence 458899999999742 234689999999999999999999999999999999999999999999999872 3
Q ss_pred CCCHHHHhcccEEEccCCC--CCc-ccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccc-cccCCCCCCChHH
Q 000789 443 KLQLKWIREKIGLVSQEPI--LFA-TSLRENIAYGKENATDQEIRTAIELANAAKFIDKLPKGLDT-MAGEHGTQLSGGQ 518 (1283)
Q Consensus 443 ~~~~~~~r~~i~~v~Q~~~--l~~-~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t-~~~~~g~~LSgGq 518 (1283)
.-+....|+++-+|+|||+ |-+ .||.++|.-......... .+.+.+.+.+.++.. |+.. .....+.+|||||
T Consensus 359 ~~~~~~~r~~~QmvFQdp~~SLnPr~tV~~~i~epL~~~~~~~--~~~~~~rv~~ll~~V--gL~~~~l~ryP~elSGGQ 434 (539)
T COG1123 359 GGELRRLRRRIQMVFQDPYSSLNPRMTVGDILAEPLRIHGGGS--GAERRARVAELLELV--GLPPEFLDRYPHELSGGQ 434 (539)
T ss_pred cchhhhhhhheEEEEeCcccccCccccHHHHHHhHHhhhcccc--hHHHHHHHHHHHHHc--CCCHHHHhcCchhcCcch
Confidence 2234567789999999996 333 499999975422110000 111111222333332 4444 4667778999999
Q ss_pred HHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhc-cCEEEEEeCCEEeEecCh
Q 000789 519 KQRIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMT--SRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTH 595 (1283)
Q Consensus 519 kqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~ 595 (1283)
||||||||||..+|+++|+|||||+||+-+...+.+.|+++.+ +.|.|+||||++.++. ||||+||++|+|||.|+.
T Consensus 435 rQRvaIARALa~~P~lli~DEp~SaLDvsvqa~VlnLl~~lq~e~g~t~lfISHDl~vV~~i~drv~vm~~G~iVE~G~~ 514 (539)
T COG1123 435 RQRVAIARALALEPKLLILDEPVSALDVSVQAQVLNLLKDLQEELGLTYLFISHDLAVVRYIADRVAVMYDGRIVEEGPT 514 (539)
T ss_pred hHHHHHHHHHhcCCCEEEecCCccccCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHhhCceEEEEECCeEEEeCCH
Confidence 9999999999999999999999999999999999999999865 5899999999999998 999999999999999999
Q ss_pred hHHhcCCCChhHHHHH
Q 000789 596 DELIKDPEGPYTQLVR 611 (1283)
Q Consensus 596 ~~l~~~~~~~~~~~~~ 611 (1283)
+++++++...|.+...
T Consensus 515 ~~v~~~p~h~Ytr~L~ 530 (539)
T COG1123 515 EKVFENPQHPYTRKLL 530 (539)
T ss_pred HHHhcCCCChHHHHHH
Confidence 9999998888877543
No 454
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=4.4e-40 Score=359.08 Aligned_cols=203 Identities=33% Similarity=0.541 Sum_probs=177.0
Q ss_pred EEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHhcceE
Q 000789 1040 IELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMG 1119 (1283)
Q Consensus 1040 I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~ 1119 (1283)
++++||+++|+. +++|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.+||.++.+.+ .+|+.++
T Consensus 1 ~~~~~l~~~~~~-----~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~--~~~~~i~ 73 (213)
T TIGR01277 1 LALDKVRYEYEH-----LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEPASGSIKVNDQSHTGLA--PYQRPVS 73 (213)
T ss_pred CeEEeeeEEeCC-----cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEcccCC--hhccceE
Confidence 468999999962 468999999999999999999999999999999999999999999999987643 4678899
Q ss_pred EEccCCCCCh-hhHHHHHhcCCCCC-----CCHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHHHH
Q 000789 1120 LVSQEPVLFN-ETIRTNIAYGKQGG-----ATEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARA 1193 (1283)
Q Consensus 1120 ~V~Qdp~Lf~-gTIreNl~~g~~~~-----~sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiARA 1193 (1283)
||||+|.+|. .|++||+.++.... ..++++.++++..++.+...+.|. +||||||||++||||
T Consensus 74 ~v~q~~~~~~~~t~~en~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----------~LS~G~~qrl~lara 142 (213)
T TIGR01277 74 MLFQENNLFAHLTVRQNIGLGLHPGLKLNAEQQEKVVDAAQQVGIADYLDRLPE-----------QLSGGQRQRVALARC 142 (213)
T ss_pred EEeccCccCCCCcHHHHHHhHhhccCCccHHHHHHHHHHHHHcCcHHHhhCCcc-----------cCCHHHHHHHHHHHH
Confidence 9999999987 59999997541111 124567778888888776665553 799999999999999
Q ss_pred HccCCCEEEEecccCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchHHhh-cCEEEEEeCCEEEEecC
Q 000789 1194 VLKNPKILLLDEATSALDAESERVVQDALERVMV--NRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGS 1260 (1283)
Q Consensus 1194 ll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt 1260 (1283)
++++|+|+||||||++||+++...+.+.|++..+ ++|+|+|||+++.+.. ||++++|++|++++.|.
T Consensus 143 l~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~tii~vsh~~~~~~~~~d~v~~l~~g~i~~~~~ 212 (213)
T TIGR01277 143 LVRPNPILLLDEPFSALDPLLREEMLALVKQLCSERQRTLLMVTHHLSDARAIASQIAVVSQGKIKVVSD 212 (213)
T ss_pred HhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCeEEEEECCeEEEecC
Confidence 9999999999999999999999999999998753 7899999999999875 99999999999999874
No 455
>cd03290 ABCC_SUR1_N The SUR domain 1. The sulfonylurea receptor SUR is an ATP transporter of the ABCC/MRP family with tandem ATPase binding domains. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=5.9e-40 Score=359.59 Aligned_cols=210 Identities=29% Similarity=0.473 Sum_probs=185.7
Q ss_pred EEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCH----HHHhc
Q 000789 376 ELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQL----KWIRE 451 (1283)
Q Consensus 376 ~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~----~~~r~ 451 (1283)
.+.|+.|+|++. .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+. ...|+
T Consensus 2 ~~~~~~~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 79 (218)
T cd03290 2 QVTNGYFSWGSG--LATLSNINIRIPTGQLTMIVGQVGCGKSSLLLAILGEMQTLEGKVHWSNKNESEPSFEATRSRNRY 79 (218)
T ss_pred eeeeeEEecCCC--CcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCcccccccccccchhhcc
Confidence 578999999743 469999999999999999999999999999999999999999999999998866542 23567
Q ss_pred ccEEEccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHhcC
Q 000789 452 KIGLVSQEPILFATSLRENIAYGKENATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARAILKN 531 (1283)
Q Consensus 452 ~i~~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARal~~~ 531 (1283)
.++|++|++.+|+.|++||+.++.+ ...++..++++..++.+++..+|.|+++.++....+||||||||++||||++.+
T Consensus 80 ~i~~~~q~~~~~~~t~~~nl~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~qrv~laral~~~ 158 (218)
T cd03290 80 SVAYAAQKPWLLNATVEENITFGSP-FNKQRYKAVTDACSLQPDIDLLPFGDQTEIGERGINLSGGQRQRICVARALYQN 158 (218)
T ss_pred eEEEEcCCCccccccHHHHHhhcCc-CCHHHHHHHHHHhCcHHHHHhCcCccccCcccCCCcCCHHHHHHHHHHHHHhhC
Confidence 8999999999998999999998754 345566778888888888899999999999999999999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHH--HHHHHcC-CCeEEEEecCchhhhccCEEEEEeCCE
Q 000789 532 PKILLLDEATSALDAESERIVQD--ALVKIMT-SRTTVVVAHRLTTIRNADLIAVVHQGK 588 (1283)
Q Consensus 532 ~~illlDE~ts~lD~~~~~~i~~--~l~~~~~-~~t~i~itH~l~~~~~~d~i~vl~~G~ 588 (1283)
|++|||||||++||+.+...+.+ .++.+.+ ++|+|++||+++.+..||++++|++|+
T Consensus 159 p~illlDEPt~~LD~~~~~~l~~~~ll~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~G~ 218 (218)
T cd03290 159 TNIVFLDDPFSALDIHLSDHLMQEGILKFLQDDKRTLVLVTHKLQYLPHADWIIAMKDGS 218 (218)
T ss_pred CCEEEEeCCccccCHHHHHHHHHHHHHHHHhcCCCEEEEEeCChHHHhhCCEEEEecCCC
Confidence 99999999999999999998887 4555433 689999999999998899999999884
No 456
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=2.4e-40 Score=379.58 Aligned_cols=201 Identities=23% Similarity=0.400 Sum_probs=172.9
Q ss_pred cccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHhcceEEEccCCCCChh-hHH
Q 000789 1055 VQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMGLVSQEPVLFNE-TIR 1133 (1283)
Q Consensus 1055 ~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qdp~Lf~g-TIr 1133 (1283)
.++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.. ....+|++++|+||++.+|.. |++
T Consensus 6 ~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~-~~~~~~~~i~~~~q~~~~~~~~tv~ 84 (302)
T TIGR01188 6 FKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPTSGTARVAGYDVVR-EPRKVRRSIGIVPQYASVDEDLTGR 84 (302)
T ss_pred eeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-CHHHHHhhcEEecCCCCCCCCCcHH
Confidence 369999999999999999999999999999999999999999999999999876 345678899999999999865 999
Q ss_pred HHHhcCCC-CCCC----HHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHHHHHccCCCEEEEecccC
Q 000789 1134 TNIAYGKQ-GGAT----EEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATS 1208 (1283)
Q Consensus 1134 eNl~~g~~-~~~s----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiARAll~~p~ILiLDEaTS 1208 (1283)
||+.+... ...+ ++++.++++..++.+.. ++ ...+||||||||++|||||+++|++|||||||+
T Consensus 85 e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~----~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~ 153 (302)
T TIGR01188 85 ENLEMMGRLYGLPKDEAEERAEELLELFELGEAA-------DR----PVGTYSGGMRRRLDIAASLIHQPDVLFLDEPTT 153 (302)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhHh-------CC----chhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCc
Confidence 99976311 1122 23455566666654332 22 335799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHc-CCceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHHHhc
Q 000789 1209 ALDAESERVVQDALERVM-VNRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDALMKI 1267 (1283)
Q Consensus 1209 aLD~~te~~I~~~L~~~~-~~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl~~ 1267 (1283)
+||+.+.+.+++.|+++. +++|+|++||+++.+.. ||+|++|++|++++.|+++++.++
T Consensus 154 gLD~~~~~~l~~~l~~~~~~g~tvi~~sH~~~~~~~~~d~v~~l~~G~i~~~g~~~~l~~~ 214 (302)
T TIGR01188 154 GLDPRTRRAIWDYIRALKEEGVTILLTTHYMEEADKLCDRIAIIDHGRIIAEGTPEELKRR 214 (302)
T ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHHh
Confidence 999999999999999875 47899999999999976 999999999999999999999764
No 457
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6e-40 Score=367.46 Aligned_cols=223 Identities=30% Similarity=0.529 Sum_probs=187.8
Q ss_pred cEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCC-----CCCceEEECCcccCCC--CH
Q 000789 374 EIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYD-----PDAGEVLIDGIDIKKL--QL 446 (1283)
Q Consensus 374 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~~~g~~~~~~--~~ 446 (1283)
.++++||++.|++ .++|+|+||+|++||+++|+||||||||||+++|+|+.+ |++|+|.+||+++... +.
T Consensus 3 ~l~~~~v~~~~~~---~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~ 79 (250)
T PRK14266 3 RIEVENLNTYFDD---AHILKNVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDGVDIYDPAVDV 79 (250)
T ss_pred EEEEEeEEEEeCC---eEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECCEEcccccccH
Confidence 3789999999963 359999999999999999999999999999999999864 4899999999998653 35
Q ss_pred HHHhcccEEEccCCCCCcccHHHHHhcCCCC--C-CH----HHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHH
Q 000789 447 KWIREKIGLVSQEPILFATSLRENIAYGKEN--A-TD----QEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQK 519 (1283)
Q Consensus 447 ~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~--~-~~----~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqk 519 (1283)
..++++++|+||++.+|+.|++||+.++... . +. +++.++++.+++.+++. ...++.+..||||||
T Consensus 80 ~~~~~~i~~~~q~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LS~Gq~ 152 (250)
T PRK14266 80 VELRKKVGMVFQKPNPFPKSIFDNVAYGLRIHGEDDEDFIEERVEESLKAAALWDEVK-------DKLDKSALGLSGGQQ 152 (250)
T ss_pred HHHhhheEEEecCCccCcchHHHHHHhHHhhcCCCCHHHHHHHHHHHHHHcCCchhHH-------HHHhCCcccCCHHHH
Confidence 5678899999999999999999999875321 1 11 22344455555444332 224566789999999
Q ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHH
Q 000789 520 QRIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMTSRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDEL 598 (1283)
Q Consensus 520 qriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l 598 (1283)
||++|||||+++|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 153 qrv~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~~~~i~~l~~G~i~~~g~~~~~ 232 (250)
T PRK14266 153 QRLCIARTIAVSPEVILMDEPCSALDPISTTKIEDLIHKLKEDYTIVIVTHNMQQATRVSKYTSFFLNGEIIESGLTDQI 232 (250)
T ss_pred HHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEECCHHHHHhhcCEEEEEECCeEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998778899999999999876 999999999999999999999
Q ss_pred hcCCCChh
Q 000789 599 IKDPEGPY 606 (1283)
Q Consensus 599 ~~~~~~~~ 606 (1283)
...+.+.+
T Consensus 233 ~~~~~~~~ 240 (250)
T PRK14266 233 FINPKDKR 240 (250)
T ss_pred HhCCCChH
Confidence 76544443
No 458
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.8e-40 Score=369.60 Aligned_cols=218 Identities=31% Similarity=0.495 Sum_probs=182.1
Q ss_pred cEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCC-----CCceEEECCcccCC--CCH
Q 000789 374 EIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDP-----DAGEVLIDGIDIKK--LQL 446 (1283)
Q Consensus 374 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~~--~~~ 446 (1283)
.++++||+++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.+||+++.. .+.
T Consensus 4 ~l~i~~v~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~ 80 (258)
T PRK14241 4 RIDVKDLNIYYGS---FHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDP 80 (258)
T ss_pred cEEEeeEEEEECC---EeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccCh
Confidence 4899999999964 3599999999999999999999999999999999999974 79999999998853 345
Q ss_pred HHHhcccEEEccCCCCCc-ccHHHHHhcCCCC---CCHH----HHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHH
Q 000789 447 KWIREKIGLVSQEPILFA-TSLRENIAYGKEN---ATDQ----EIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQ 518 (1283)
Q Consensus 447 ~~~r~~i~~v~Q~~~l~~-~ti~~ni~~~~~~---~~~~----~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGq 518 (1283)
..+|+.++|++|++.+|. .|++||+.++... .+.+ .+.++++..++.++ +.......+.+|||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~~~~~~~~~LS~G~ 153 (258)
T PRK14241 81 VAVRRTIGMVFQRPNPFPTMSIRDNVVAGLKLNGVRNKKDLDELVEKSLRGANLWNE-------VKDRLDKPGGGLSGGQ 153 (258)
T ss_pred HHHhcceEEEccccccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchh-------hhhHhhCCcccCCHHH
Confidence 567889999999999987 4999999875311 1111 22233333332211 1234566778999999
Q ss_pred HHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhc-cCEEEEEe------CCEEeE
Q 000789 519 KQRIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMTSRTTVVVAHRLTTIRN-ADLIAVVH------QGKIVE 591 (1283)
Q Consensus 519 kqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~------~G~i~~ 591 (1283)
|||++|||||+.+|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|+ +|+|++
T Consensus 154 ~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tviivsH~~~~~~~~~d~i~~l~~~~~~~~g~i~~ 233 (258)
T PRK14241 154 QQRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQDYTIVIVTHNMQQAARVSDQTAFFNLEATGKPGRLVE 233 (258)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccCCCCceEEe
Confidence 99999999999999999999999999999999999999998767899999999999865 99999997 899999
Q ss_pred ecChhHHhcC
Q 000789 592 KGTHDELIKD 601 (1283)
Q Consensus 592 ~g~~~~l~~~ 601 (1283)
.|++++++..
T Consensus 234 ~~~~~~~~~~ 243 (258)
T PRK14241 234 IDDTEKIFSN 243 (258)
T ss_pred cCCHHHHHhC
Confidence 9999998765
No 459
>PRK14252 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.3e-40 Score=369.92 Aligned_cols=225 Identities=29% Similarity=0.477 Sum_probs=188.5
Q ss_pred cccEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCC-----CCceEEECCcccC----
Q 000789 372 EGEIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDP-----DAGEVLIDGIDIK---- 442 (1283)
Q Consensus 372 ~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~---- 442 (1283)
.+.|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+.+| ++|+|.++|.++.
T Consensus 14 ~~~l~~~~l~~~~~~---~~vl~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~sG~i~~~g~~~~~~~~ 90 (265)
T PRK14252 14 QQKSEVNKLNFYYGG---YQALKNINMMVHEKQVTALIGPSGCGKSTFLRCFNRMHDLYPGNHYEGEIILHPDNVNILSP 90 (265)
T ss_pred CceEEEEEEEEEECC---eeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCCCcccEEEEcCcccccccc
Confidence 457999999999973 3699999999999999999999999999999999999875 7999999998874
Q ss_pred CCCHHHHhcccEEEccCCCCCcccHHHHHhcCCC--CCC-----HHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCC
Q 000789 443 KLQLKWIREKIGLVSQEPILFATSLRENIAYGKE--NAT-----DQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLS 515 (1283)
Q Consensus 443 ~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~--~~~-----~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LS 515 (1283)
..+...+++.++|++|++.+|..|++||+.++.. ... ++++.++++.+++.+ ++.+..++....||
T Consensus 91 ~~~~~~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~l~~~~~~~~~~LS 163 (265)
T PRK14252 91 EVDPIEVRMRISMVFQKPNPFPKSIFENVAYGLRIRGVKRRSILEERVENALRNAALWD-------EVKDRLGDLAFNLS 163 (265)
T ss_pred ccCHHHHhccEEEEccCCcCCcchHHHHHHhHHHHcCCChHHHHHHHHHHHHHHcCCch-------hhhHHHhCCcccCC
Confidence 2344567889999999999999999999987531 111 123344444433322 33345667788999
Q ss_pred hHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhc-cCEEEEEeCCEEeEecC
Q 000789 516 GGQKQRIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMTSRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGT 594 (1283)
Q Consensus 516 gGqkqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~ 594 (1283)
||||||++|||||+++|++|||||||++||+.+.+.+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|+
T Consensus 164 ~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~tiiivth~~~~~~~~~d~i~~l~~G~i~~~g~ 243 (265)
T PRK14252 164 GGQQQRLCIARALATDPEILLFDEPTSALDPIATASIEELISDLKNKVTILIVTHNMQQAARVSDYTAYMYMGELIEFGA 243 (265)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999999999999998777899999999999865 99999999999999999
Q ss_pred hhHHhcCCCChh
Q 000789 595 HDELIKDPEGPY 606 (1283)
Q Consensus 595 ~~~l~~~~~~~~ 606 (1283)
++++..++...|
T Consensus 244 ~~~~~~~~~~~~ 255 (265)
T PRK14252 244 TDTIFIKPKNKQ 255 (265)
T ss_pred HHHHHhCCCCHH
Confidence 999876533333
No 460
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.8e-40 Score=372.19 Aligned_cols=218 Identities=33% Similarity=0.573 Sum_probs=182.7
Q ss_pred EEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCC--CCHHHHhcc
Q 000789 375 IELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKK--LQLKWIREK 452 (1283)
Q Consensus 375 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~--~~~~~~r~~ 452 (1283)
|+++||+++|++ ..++++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++.. .+...+++.
T Consensus 2 l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (275)
T PRK13639 2 LETRDLKYSYPD--GTEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPTSGEVLIKGEPIKYDKKSLLEVRKT 79 (275)
T ss_pred EEEEEEEEEeCC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEECccccchHHHHHhh
Confidence 689999999963 2359999999999999999999999999999999999999999999999999852 234467889
Q ss_pred cEEEccCC--CCCcccHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHH
Q 000789 453 IGLVSQEP--ILFATSLRENIAYGKEN--ATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARAI 528 (1283)
Q Consensus 453 i~~v~Q~~--~l~~~ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARal 528 (1283)
|+|++|++ .+|+.|+.||+.++... .+.++..+ .+.+.++.+ |++......+.+||||||||++|||||
T Consensus 80 i~~v~q~~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~-----~~~~~l~~~--~L~~~~~~~~~~LS~Gq~qrv~laral 152 (275)
T PRK13639 80 VGIVFQNPDDQLFAPTVEEDVAFGPLNLGLSKEEVEK-----RVKEALKAV--GMEGFENKPPHHLSGGQKKRVAIAGIL 152 (275)
T ss_pred eEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHC--CCchhhcCChhhCCHHHHHHHHHHHHH
Confidence 99999997 47888999999875321 22222211 112334444 454444556779999999999999999
Q ss_pred hcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC-CCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHHhcC
Q 000789 529 LKNPKILLLDEATSALDAESERIVQDALVKIMT-SRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDELIKD 601 (1283)
Q Consensus 529 ~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~-~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~ 601 (1283)
+.+|++|||||||++||+.+...+.+.|.++.+ ++|+|++||+++.+.. ||+|++|++|++++.|++++++..
T Consensus 153 ~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 227 (275)
T PRK13639 153 AMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVDLVPVYADKVYVMSDGKIIKEGTPKEVFSD 227 (275)
T ss_pred hcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 999999999999999999999999999998854 7899999999999875 999999999999999999998754
No 461
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=4.5e-40 Score=363.32 Aligned_cols=212 Identities=28% Similarity=0.437 Sum_probs=175.1
Q ss_pred cEEEEEEEEECCCCCC-CcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHH---H
Q 000789 374 EIELRDVYFRYPARPE-VQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKW---I 449 (1283)
Q Consensus 374 ~i~~~~v~f~y~~~~~-~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~---~ 449 (1283)
.|+++|++++|++... .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+... .
T Consensus 6 ~l~~~~l~~~~~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 85 (228)
T PRK10584 6 IVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGSSGEVSLVGQPLHQMDEEARAKL 85 (228)
T ss_pred eEEEeeeEEEccCCCcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCeeEEECCEEcccCCHHHHHHH
Confidence 4899999999974221 25899999999999999999999999999999999999999999999999998776543 2
Q ss_pred -hcccEEEccCCCCCcc-cHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHH
Q 000789 450 -REKIGLVSQEPILFAT-SLRENIAYGKE--NATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIA 525 (1283)
Q Consensus 450 -r~~i~~v~Q~~~l~~~-ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiA 525 (1283)
++.++|++|++.+|.. |++||+.++.. .....+. ...+.+.++.+ |++.........||||||||++||
T Consensus 86 ~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~LS~Ge~qrl~la 158 (228)
T PRK10584 86 RAKHVGFVFQSFMLIPTLNALENVELPALLRGESSRQS-----RNGAKALLEQL--GLGKRLDHLPAQLSGGEQQRVALA 158 (228)
T ss_pred HhheEEEEEcccccCCCcCHHHHHHHHHHhcCCCHHHH-----HHHHHHHHHHc--CCHhHhhCChhhCCHHHHHHHHHH
Confidence 3579999999999875 99999986421 1111111 11122344444 444444555678999999999999
Q ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhccCEEEEEeCCEEeEe
Q 000789 526 RAILKNPKILLLDEATSALDAESERIVQDALVKIMT--SRTTVVVAHRLTTIRNADLIAVVHQGKIVEK 592 (1283)
Q Consensus 526 Ral~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~ 592 (1283)
|||+.+|++|||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+..||++++|++|++++.
T Consensus 159 ~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~g~i~~~ 227 (228)
T PRK10584 159 RAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQLAARCDRRLRLVNGQLQEE 227 (228)
T ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEec
Confidence 999999999999999999999999999999998753 6899999999999888999999999999864
No 462
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.4e-40 Score=368.42 Aligned_cols=225 Identities=32% Similarity=0.489 Sum_probs=184.0
Q ss_pred cEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCC-----CceEEECCcccCC--CCH
Q 000789 374 EIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPD-----AGEVLIDGIDIKK--LQL 446 (1283)
Q Consensus 374 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~-----~G~i~~~g~~~~~--~~~ 446 (1283)
-++++||+++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|+ +|+|.++|.++.. .+.
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~ 80 (252)
T PRK14272 4 LLSAQDVNIYYGD---KQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDP 80 (252)
T ss_pred EEEEeeeEEEECC---EEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCH
Confidence 4789999999963 36999999999999999999999999999999999999874 8999999999864 344
Q ss_pred HHHhcccEEEccCCCCCcc-cHHHHHhcCCCC--C-CHHHHHHHHHHhcHHHHHHhC--CCCccccccCCCCCCChHHHH
Q 000789 447 KWIREKIGLVSQEPILFAT-SLRENIAYGKEN--A-TDQEIRTAIELANAAKFIDKL--PKGLDTMAGEHGTQLSGGQKQ 520 (1283)
Q Consensus 447 ~~~r~~i~~v~Q~~~l~~~-ti~~ni~~~~~~--~-~~~~~~~~~~~~~~~~~i~~l--p~g~~t~~~~~g~~LSgGqkq 520 (1283)
..+|+.++|++|++.+|.. |+.||+.++... . .+++..+.+. +.+..+ ..++.......+.+|||||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~-----~~l~~~~l~~~l~~~~~~~~~~LS~G~~q 155 (252)
T PRK14272 81 VAMRRRVGMVFQKPNPFPTMSVFDNVVAGLKLAGIRDRDHLMEVAE-----RSLRGAALWDEVKDRLKTPATGLSGGQQQ 155 (252)
T ss_pred HHhhceeEEEeccCccCcCCCHHHHHHHHHHhcCCCCHHHHHHHHH-----HHHHHcCcchhhhhhhcCCcccCCHHHHH
Confidence 5678899999999999885 999999865321 1 2222222221 111111 111222334556789999999
Q ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHHh
Q 000789 521 RIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMTSRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDELI 599 (1283)
Q Consensus 521 riaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~ 599 (1283)
|++|||||+++|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|++++++
T Consensus 156 rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 235 (252)
T PRK14272 156 RLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKKVTTIIIVTHNMHQAARVSDTTSFFLVGDLVEHGPTDQLF 235 (252)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999998777999999999999886 9999999999999999999998
Q ss_pred cCCCChh
Q 000789 600 KDPEGPY 606 (1283)
Q Consensus 600 ~~~~~~~ 606 (1283)
.++...+
T Consensus 236 ~~~~~~~ 242 (252)
T PRK14272 236 TNPRDER 242 (252)
T ss_pred hCcCcHH
Confidence 7644444
No 463
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.6e-40 Score=346.45 Aligned_cols=221 Identities=32% Similarity=0.536 Sum_probs=193.5
Q ss_pred EEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHH-hccc
Q 000789 375 IELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWI-REKI 453 (1283)
Q Consensus 375 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~-r~~i 453 (1283)
+++++++++|++ ..+++||||++++||+++|+|||||||||++|+|+|+|+|++|+|.++|+||..+++... |..|
T Consensus 5 L~v~~l~k~FGG---l~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~P~~G~v~~~G~~it~l~p~~iar~Gi 81 (250)
T COG0411 5 LEVRGLSKRFGG---LTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYKPSSGTVIFRGRDITGLPPHRIARLGI 81 (250)
T ss_pred eeeccceeecCC---EEEEeceeEEEcCCeEEEEECCCCCCceeeeeeecccccCCCceEEECCcccCCCCHHHHHhccc
Confidence 678999999974 469999999999999999999999999999999999999999999999999999997765 5679
Q ss_pred EEEccCCCCCcc-cHHHHHhcCCCCC-----------CHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHH
Q 000789 454 GLVSQEPILFAT-SLRENIAYGKENA-----------TDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQR 521 (1283)
Q Consensus 454 ~~v~Q~~~l~~~-ti~~ni~~~~~~~-----------~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqr 521 (1283)
+--||.+.+|++ ||.||+..+.... ...+..++.+ .+.+.++.+ |++....+...+||+||+.|
T Consensus 82 ~RTFQ~~rlF~~lTVlENv~va~~~~~~~~~~l~~~~~~~~e~~~~e--~A~~~Le~v--gL~~~a~~~A~~LsyG~qR~ 157 (250)
T COG0411 82 ARTFQITRLFPGLTVLENVAVGAHARLGLSGLLGRPRARKEEREARE--RARELLEFV--GLGELADRPAGNLSYGQQRR 157 (250)
T ss_pred eeecccccccCCCcHHHHHHHHhhhhhhhhhhhccccchhhHHHHHH--HHHHHHHHc--CCchhhcchhhcCChhHhHH
Confidence 999999999987 9999999863211 0011122222 234566666 89988999999999999999
Q ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHH
Q 000789 522 IAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMT--SRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDEL 598 (1283)
Q Consensus 522 iaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l 598 (1283)
+.|||||+.+|++|+||||.++|.+.....+.+.|+++.+ +.|+++|.||++.+.. ||||+||+.|+++.+|+|+|.
T Consensus 158 LEIArALa~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~~g~tillIEHdM~~Vm~l~dri~Vl~~G~~IAeG~P~eV 237 (250)
T COG0411 158 LEIARALATQPKLLLLDEPAAGLNPEETEELAELIRELRDRGGVTILLIEHDMKLVMGLADRIVVLNYGEVIAEGTPEEV 237 (250)
T ss_pred HHHHHHHhcCCCEEEecCccCCCCHHHHHHHHHHHHHHHhcCCcEEEEEEeccHHHhhhccEEEeccCCcCcccCCHHHH
Confidence 9999999999999999999999999999999999999985 3899999999999976 999999999999999999999
Q ss_pred hcCC
Q 000789 599 IKDP 602 (1283)
Q Consensus 599 ~~~~ 602 (1283)
.++|
T Consensus 238 ~~dp 241 (250)
T COG0411 238 RNNP 241 (250)
T ss_pred hcCH
Confidence 8764
No 464
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=8.3e-40 Score=368.56 Aligned_cols=222 Identities=28% Similarity=0.419 Sum_probs=184.8
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCC---cceEEECCccCCCC-----C
Q 000789 1039 AIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPD---SGHVLLDNIELPKF-----K 1110 (1283)
Q Consensus 1039 ~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~---~G~I~idG~di~~~-----~ 1110 (1283)
-|+++||+++|++ .++|+|+||+|++||+++|+|+||||||||+++|+|+++|+ +|+|.+||.++... +
T Consensus 4 ~l~~~nl~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~ 80 (262)
T PRK09984 4 IIRVEKLAKTFNQ---HQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARD 80 (262)
T ss_pred EEEEeeEEEEeCC---eEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchh
Confidence 4899999999974 35999999999999999999999999999999999999986 49999999998653 2
Q ss_pred hHHHhcceEEEccCCCCCh-hhHHHHHhcCCCC-------------CCCHHHHHHHHHHhChHHHHHhCCCCcccccCCC
Q 000789 1111 LSWLRQQMGLVSQEPVLFN-ETIRTNIAYGKQG-------------GATEEEIIAATEASNAHNFISALPHGYETNVGER 1176 (1283)
Q Consensus 1111 ~~~lR~~i~~V~Qdp~Lf~-gTIreNl~~g~~~-------------~~sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~ 1176 (1283)
...+|++++|+||++.+|. .|++||+.++... ...++++.++++..++.+.+. ..
T Consensus 81 ~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~ 149 (262)
T PRK09984 81 IRKSRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMVHFAH-----------QR 149 (262)
T ss_pred HHHHHhheEEEccccccccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHcCCHHHHh-----------CC
Confidence 4567889999999998887 5999999865211 011234556666666654433 33
Q ss_pred CCCCChhHHHHHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchHHhh-cCEEEEEeCC
Q 000789 1177 GVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMV--NRTTVVVAHRLTTIKN-ADIIAVVKNG 1253 (1283)
Q Consensus 1177 G~~LSgGQrQRlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~D~I~vl~~G 1253 (1283)
...||||||||++||||++.+|++|||||||++||+++.+.+.+.|+++.+ ++|+|+|||+++.+.. ||+|++|++|
T Consensus 150 ~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~~~~~~~d~i~~l~~g 229 (262)
T PRK09984 150 VSTLSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVDYALRYCERIVALRQG 229 (262)
T ss_pred ccccCHHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 457999999999999999999999999999999999999999999998753 7899999999998754 9999999999
Q ss_pred EEEEecChHHHHhccCchhHHHHH
Q 000789 1254 VIAEQGSHDALMKITDGAYASLVA 1277 (1283)
Q Consensus 1254 ~Ive~Gt~~eLl~~~~g~y~~L~~ 1277 (1283)
++++.|+++++ . .....+++.
T Consensus 230 ~i~~~g~~~~~-~--~~~~~~~~~ 250 (262)
T PRK09984 230 HVFYDGSSQQF-D--NERFDHLYR 250 (262)
T ss_pred EEEEeCCHHHh-c--cHHHHHHHh
Confidence 99999999997 2 234455543
No 465
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.5e-40 Score=383.61 Aligned_cols=212 Identities=28% Similarity=0.481 Sum_probs=181.2
Q ss_pred EEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCC----CHHHHh
Q 000789 375 IELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKL----QLKWIR 450 (1283)
Q Consensus 375 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~----~~~~~r 450 (1283)
|++ |++++|++ . .+ |+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++... +....+
T Consensus 2 l~~-~l~k~~~~---~-~~-~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~~~~~~~~~~~~~~~ 75 (352)
T PRK11144 2 LEL-NFKQQLGD---L-CL-TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQKGRIVLNGRVLFDAEKGICLPPEK 75 (352)
T ss_pred eEE-EEEEEeCC---E-EE-EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccchhh
Confidence 567 99999963 2 23 89999999999999999999999999999999999999999999988643 234467
Q ss_pred cccEEEccCCCCCc-ccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHh
Q 000789 451 EKIGLVSQEPILFA-TSLRENIAYGKENATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARAIL 529 (1283)
Q Consensus 451 ~~i~~v~Q~~~l~~-~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARal~ 529 (1283)
++++||+|++.+|+ .|++||+.++.+....+++.+.++ .+ |++........+||||||||++|||||+
T Consensus 76 ~~i~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~l~---------~~--gl~~~~~~~~~~LSgGq~qRvalaraL~ 144 (352)
T PRK11144 76 RRIGYVFQDARLFPHYKVRGNLRYGMAKSMVAQFDKIVA---------LL--GIEPLLDRYPGSLSGGEKQRVAIGRALL 144 (352)
T ss_pred CCEEEEcCCcccCCCCcHHHHHHhhhhhhhHHHHHHHHH---------Hc--CCchhhhCCcccCCHHHHHHHHHHHHHH
Confidence 89999999999997 499999998754333333444444 43 5555556667899999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHHhcCCC
Q 000789 530 KNPKILLLDEATSALDAESERIVQDALVKIMT--SRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDELIKDPE 603 (1283)
Q Consensus 530 ~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~~~ 603 (1283)
.+|++|||||||++||+.+.+.+.+.|+++.+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++..++.
T Consensus 145 ~~p~llLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tii~vTHd~~~~~~~~d~i~~l~~G~i~~~g~~~~i~~~p~ 221 (352)
T PRK11144 145 TAPELLLMDEPLASLDLPRKRELLPYLERLAREINIPILYVSHSLDEILRLADRVVVLEQGKVKAFGPLEEVWASSA 221 (352)
T ss_pred cCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEeCCEEEEecCHHHHHhCcc
Confidence 99999999999999999999999999998754 6899999999998866 99999999999999999999987753
No 466
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=4.4e-40 Score=369.51 Aligned_cols=221 Identities=28% Similarity=0.454 Sum_probs=184.3
Q ss_pred EEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHHhcccE
Q 000789 375 IELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWIREKIG 454 (1283)
Q Consensus 375 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 454 (1283)
|+++|+++.|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+...+++.++
T Consensus 2 l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 78 (256)
T TIGR03873 2 LRLSRVSWSAGG---RLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPDAGTVDLAGVDLHGLSRRARARRVA 78 (256)
T ss_pred ceEEeEEEEECC---EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEEcccCCHHHHhhheE
Confidence 689999999963 36999999999999999999999999999999999999999999999999998888878888899
Q ss_pred EEccCCCC-CcccHHHHHhcCCCCCCHH-HHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHhcCC
Q 000789 455 LVSQEPIL-FATSLRENIAYGKENATDQ-EIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARAILKNP 532 (1283)
Q Consensus 455 ~v~Q~~~l-~~~ti~~ni~~~~~~~~~~-~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARal~~~~ 532 (1283)
|++|++.+ +..|++||+.++....... ..........+.+.++.+ |+.......+..||||||||++||||++.+|
T Consensus 79 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~al~~~p 156 (256)
T TIGR03873 79 LVEQDSDTAVPLTVRDVVALGRIPHRSLWAGDSPHDAAVVDRALART--ELSHLADRDMSTLSGGERQRVHVARALAQEP 156 (256)
T ss_pred EecccCccCCCCCHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHc--CcHhhhcCCcccCCHHHHHHHHHHHHHhcCC
Confidence 99999864 4579999998863211000 000000111233444544 5555556677899999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHcC-CCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHHhc
Q 000789 533 KILLLDEATSALDAESERIVQDALVKIMT-SRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDELIK 600 (1283)
Q Consensus 533 ~illlDE~ts~lD~~~~~~i~~~l~~~~~-~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~ 600 (1283)
+++||||||++||+.+...+.+.|+++.+ +.|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 157 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 226 (256)
T TIGR03873 157 KLLLLDEPTNHLDVRAQLETLALVRELAATGVTVVAALHDLNLAASYCDHVVVLDGGRVVAAGPPREVLT 226 (256)
T ss_pred CEEEEcCccccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCEEEecCHHHhhC
Confidence 99999999999999999999999998754 6899999999999965 99999999999999999988754
No 467
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=3e-40 Score=373.94 Aligned_cols=214 Identities=34% Similarity=0.596 Sum_probs=184.5
Q ss_pred cEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHHhccc
Q 000789 374 EIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWIREKI 453 (1283)
Q Consensus 374 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 453 (1283)
.++++||+++|+. ++.+|+||||+|++|+++|++||||||||||+|+|+|+..|++|+|.++|.+...- ....+++|
T Consensus 4 ~i~~~~l~k~~~~--~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~~G~i~i~G~~~~~~-~~~~~~~i 80 (293)
T COG1131 4 VIEVRNLTKKYGG--DKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPTSGEILVLGYDVVKE-PAKVRRRI 80 (293)
T ss_pred eeeecceEEEeCC--CCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCceEEEEcCEeCccC-HHHHHhhe
Confidence 4788999999973 24699999999999999999999999999999999999999999999999998765 66788899
Q ss_pred EEEccCCCCCcc-cHHHHHhcCCC-----C-CCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHH
Q 000789 454 GLVSQEPILFAT-SLRENIAYGKE-----N-ATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIAR 526 (1283)
Q Consensus 454 ~~v~Q~~~l~~~-ti~~ni~~~~~-----~-~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiAR 526 (1283)
|||||+|.+++. |++||+.|... . ..++++.+.++.. |++..-..+..+||+|||||++||+
T Consensus 81 gy~~~~~~~~~~lT~~e~l~~~~~l~~~~~~~~~~~~~~~l~~~-----------~L~~~~~~~~~~lS~G~kqrl~ia~ 149 (293)
T COG1131 81 GYVPQEPSLYPELTVRENLEFFARLYGLSKEEAEERIEELLELF-----------GLEDKANKKVRTLSGGMKQRLSIAL 149 (293)
T ss_pred EEEccCCCCCccccHHHHHHHHHHHhCCChhHHHHHHHHHHHHc-----------CCchhhCcchhhcCHHHHHHHHHHH
Confidence 999999998876 99999987421 1 1123444455444 4433224556789999999999999
Q ss_pred HHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC-C-CeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHHhcC
Q 000789 527 AILKNPKILLLDEATSALDAESERIVQDALVKIMT-S-RTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDELIKD 601 (1283)
Q Consensus 527 al~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~-~-~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~ 601 (1283)
||+.+|++|||||||++|||.+...+.+.|+++.+ + +|++++||.++.+.. ||+|++|++|+++..|+.+++...
T Consensus 150 aL~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~e~~~~~d~v~il~~G~~~~~g~~~~l~~~ 227 (293)
T COG1131 150 ALLHDPELLILDEPTSGLDPESRREIWELLRELAKEGGVTILLSTHILEEAEELCDRVIILNDGKIIAEGTPEELKEK 227 (293)
T ss_pred HHhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHHHHHHhCCEEEEEeCCEEEEeCCHHHHHHh
Confidence 99999999999999999999999999999999875 4 699999999999987 999999999999999999987654
No 468
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.5e-40 Score=360.54 Aligned_cols=205 Identities=26% Similarity=0.511 Sum_probs=174.8
Q ss_pred EEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHHhcccE
Q 000789 375 IELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWIREKIG 454 (1283)
Q Consensus 375 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 454 (1283)
|+++|+++.|++ +++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.+||+++.. ..+++++
T Consensus 1 l~~~~l~~~~~~---~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~----~~~~~i~ 73 (210)
T cd03269 1 LEVENVTKRFGR---VTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPDSGEVLFDGKPLDI----AARNRIG 73 (210)
T ss_pred CEEEEEEEEECC---EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCCchhH----HHHccEE
Confidence 478999999963 369999999999999999999999999999999999999999999999988753 4577899
Q ss_pred EEccCCCCCcc-cHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHhcC
Q 000789 455 LVSQEPILFAT-SLRENIAYGKE--NATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARAILKN 531 (1283)
Q Consensus 455 ~v~Q~~~l~~~-ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARal~~~ 531 (1283)
|++|++.++.. |++||+.++.. .....+.. ..+.++++.+ |++........+||||||||++|||||+.+
T Consensus 74 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~al~~~ 146 (210)
T cd03269 74 YLPEERGLYPKMKVIDQLVYLAQLKGLKKEEAR-----RRIDEWLERL--ELSEYANKRVEELSKGNQQKVQFIAAVIHD 146 (210)
T ss_pred EeccCCcCCcCCcHHHHHHHHHHHcCCChHHHH-----HHHHHHHHHc--CChHHHhCcHhhCCHHHHHHHHHHHHHhcC
Confidence 99999999875 99999987431 11111111 1234556665 666666777889999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhc-cCEEEEEeCCEEeEec
Q 000789 532 PKILLLDEATSALDAESERIVQDALVKIM-TSRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKG 593 (1283)
Q Consensus 532 ~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g 593 (1283)
|+++||||||++||+.+.+.+.+.|+++. +++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 147 p~~lllDEP~~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~ 210 (210)
T cd03269 147 PELLILDEPFSGLDPVNVELLKDVIRELARAGKTVILSTHQMELVEELCDRVLLLNKGRAVLYG 210 (210)
T ss_pred CCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhhhEEEEEeCCEEEecC
Confidence 99999999999999999999999999875 46899999999999865 9999999999998764
No 469
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=4.6e-40 Score=367.24 Aligned_cols=215 Identities=22% Similarity=0.339 Sum_probs=176.4
Q ss_pred EEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhcc--CCCCcceEEECCccCCCCChHHH-hc
Q 000789 1040 IELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERF--YDPDSGHVLLDNIELPKFKLSWL-RQ 1116 (1283)
Q Consensus 1040 I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl--~~~~~G~I~idG~di~~~~~~~l-R~ 1116 (1283)
|+++||+++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+ ++|++|+|.+||.++...+.... |.
T Consensus 1 l~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 77 (243)
T TIGR01978 1 LKIKDLHVSVED---KEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLLELEPDERARA 77 (243)
T ss_pred CeEeeEEEEECC---EEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecCCCCHHHhhcc
Confidence 578999999973 3599999999999999999999999999999999999 47999999999999988776554 45
Q ss_pred ceEEEccCCCCChh-hHHHHHhcCCC--CC------CC----HHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChh
Q 000789 1117 QMGLVSQEPVLFNE-TIRTNIAYGKQ--GG------AT----EEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGG 1183 (1283)
Q Consensus 1117 ~i~~V~Qdp~Lf~g-TIreNl~~g~~--~~------~s----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgG 1183 (1283)
.++||||+|.+|.+ |++||+.+... .. .+ ++++.++++..++.+.. .+..+. ..||||
T Consensus 78 ~i~~v~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~------~~~~~~---~~LS~G 148 (243)
T TIGR01978 78 GLFLAFQYPEEIPGVSNLEFLRSALNARRSARGEEPLDLLDFLKLLKAKLALLGMDEEF------LNRSVN---EGFSGG 148 (243)
T ss_pred ceEeeeccccccCCcCHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHcCCchhh------cccccc---cCcCHH
Confidence 69999999998875 89999865311 00 11 12344444444442110 122221 259999
Q ss_pred HHHHHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchHHhh--cCEEEEEeCCEEEEecC
Q 000789 1184 QKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVM-VNRTTVVVAHRLTTIKN--ADIIAVVKNGVIAEQGS 1260 (1283)
Q Consensus 1184 QrQRlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHrl~ti~~--~D~I~vl~~G~Ive~Gt 1260 (1283)
||||++|||||+.+|++|||||||++||+.+.+.+.+.|+++. +++|+|+|||+++.+.. ||+|++|++|++++.|+
T Consensus 149 ~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~~~~~~~~d~i~~l~~G~i~~~g~ 228 (243)
T TIGR01978 149 EKKRNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQRLLNYIKPDYVHVLLDGRIVKSGD 228 (243)
T ss_pred HHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHHHHHhhcCCeEEEEeCCEEEEecC
Confidence 9999999999999999999999999999999999999999875 47899999999999976 79999999999999999
Q ss_pred hHHHHh
Q 000789 1261 HDALMK 1266 (1283)
Q Consensus 1261 ~~eLl~ 1266 (1283)
++++..
T Consensus 229 ~~~~~~ 234 (243)
T TIGR01978 229 VELAKE 234 (243)
T ss_pred HHHhcc
Confidence 986654
No 470
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=9.6e-40 Score=359.01 Aligned_cols=208 Identities=30% Similarity=0.486 Sum_probs=173.7
Q ss_pred EEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHH---HHhc
Q 000789 375 IELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLK---WIRE 451 (1283)
Q Consensus 375 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~---~~r~ 451 (1283)
|+++||+++|++ +.++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+.. .+|+
T Consensus 2 l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 79 (222)
T PRK10908 2 IRFEHVSKAYLG--GRQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPSAGKIWFSGHDITRLKNREVPFLRR 79 (222)
T ss_pred EEEEeeEEEecC--CCeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCChhHHHHHHh
Confidence 789999999952 24699999999999999999999999999999999999999999999999999876543 3678
Q ss_pred ccEEEccCCCCC-cccHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHH
Q 000789 452 KIGLVSQEPILF-ATSLRENIAYGKE--NATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARAI 528 (1283)
Q Consensus 452 ~i~~v~Q~~~l~-~~ti~~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARal 528 (1283)
.++|++|++.++ ..|++||+.++.. ..+.++..+. +.+.++.+ |++........+||||||||++||||+
T Consensus 80 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~-----~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~laral 152 (222)
T PRK10908 80 QIGMIFQDHHLLMDRTVYDNVAIPLIIAGASGDDIRRR-----VSAALDKV--GLLDKAKNFPIQLSGGEQQRVGIARAV 152 (222)
T ss_pred heEEEecCccccccccHHHHHHhHHHhcCCCHHHHHHH-----HHHHHHHc--CChhhhhCCchhCCHHHHHHHHHHHHH
Confidence 999999999875 5699999987531 1223222221 12233333 444445566689999999999999999
Q ss_pred hcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhc-cCEEEEEeCCEEeE
Q 000789 529 LKNPKILLLDEATSALDAESERIVQDALVKIM-TSRTTVVVAHRLTTIRN-ADLIAVVHQGKIVE 591 (1283)
Q Consensus 529 ~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~ 591 (1283)
+.+|++|||||||++||+.+.+.+.+.|.++. ++.|+|++||+++.+.. ||+|++|++|+++.
T Consensus 153 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~ 217 (222)
T PRK10908 153 VNKPAVLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIGLISRRSYRMLTLSDGHLHG 217 (222)
T ss_pred HcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEcc
Confidence 99999999999999999999999999999875 36899999999999976 99999999999864
No 471
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.1e-40 Score=367.59 Aligned_cols=220 Identities=30% Similarity=0.424 Sum_probs=186.7
Q ss_pred cEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCC-----CCceEEECCcccCCC--CH
Q 000789 374 EIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDP-----DAGEVLIDGIDIKKL--QL 446 (1283)
Q Consensus 374 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~~~--~~ 446 (1283)
.+.++++++.|++ .++|+|+||++++||+++|+||||||||||+++|+|+++| ++|+|.++|+++... +.
T Consensus 8 ~~~~~~~~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~ 84 (261)
T PRK14263 8 VMDCKLDKIFYGN---FMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFLGQDVYGKGVDP 84 (261)
T ss_pred eEEEEeEEEEeCC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEECCEeccccccch
Confidence 4889999999963 3699999999999999999999999999999999999987 799999999998643 34
Q ss_pred HHHhcccEEEccCCCCCcccHHHHHhcCCCC-----CCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHH
Q 000789 447 KWIREKIGLVSQEPILFATSLRENIAYGKEN-----ATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQR 521 (1283)
Q Consensus 447 ~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~-----~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqr 521 (1283)
..+++.++|++|++.+|..|+.||+.++... ...+++.++++..++.+.+. ...++.+.+||||||||
T Consensus 85 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~-------~~~~~~~~~LS~G~~qr 157 (261)
T PRK14263 85 VVVRRYIGMVFQQPNPFSMSIFDNVAFGLRLNRYKGDLGDRVKHALQGAALWDEVK-------DKLKVSGLSLSGGQQQR 157 (261)
T ss_pred HhhhhceEEEecCCccccccHHHHHHHHHhhcCchHHHHHHHHHHHHHcCCchhhh-------hhhhCCcccCCHHHHHH
Confidence 4667889999999999989999999986421 11234455555555433322 23456778999999999
Q ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhc-cCEEEEEe--------CCEEeEe
Q 000789 522 IAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMTSRTTVVVAHRLTTIRN-ADLIAVVH--------QGKIVEK 592 (1283)
Q Consensus 522 iaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~--------~G~i~~~ 592 (1283)
++|||||+++|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|+ +|++++.
T Consensus 158 v~laral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~~d~v~~l~~~~~~~~~~G~i~~~ 237 (261)
T PRK14263 158 LCIARAIATEPEVLLLDEPCSALDPIATRRVEELMVELKKDYTIALVTHNMQQAIRVADTTAFFSVDISQGTRTGYLVEM 237 (261)
T ss_pred HHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEecccccccCCceEEEe
Confidence 99999999999999999999999999999999999998777899999999999865 99999996 8999999
Q ss_pred cChhHHhcCCC
Q 000789 593 GTHDELIKDPE 603 (1283)
Q Consensus 593 g~~~~l~~~~~ 603 (1283)
|+++++++++.
T Consensus 238 g~~~~~~~~~~ 248 (261)
T PRK14263 238 GPTAQIFQNPR 248 (261)
T ss_pred CCHHHHHhCCC
Confidence 99999986533
No 472
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.8e-40 Score=357.92 Aligned_cols=201 Identities=30% Similarity=0.536 Sum_probs=170.3
Q ss_pred EEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHHhcccE
Q 000789 375 IELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWIREKIG 454 (1283)
Q Consensus 375 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 454 (1283)
|+++|++++|++. . .|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. .++.++
T Consensus 1 i~~~~l~~~~~~~---~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~~G~i~~~g~~~~~~~~--~~~~i~ 73 (211)
T cd03298 1 VRLDKIRFSYGEQ---P--MHFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQSGRVLINGVDVTAAPP--ADRPVS 73 (211)
T ss_pred CEEEeEEEEeCCE---e--cceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCcCCH--hHccEE
Confidence 5789999999632 2 39999999999999999999999999999999999999999999999876654 357899
Q ss_pred EEccCCCCCcc-cHHHHHhcCCC-CC-----CHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHH
Q 000789 455 LVSQEPILFAT-SLRENIAYGKE-NA-----TDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARA 527 (1283)
Q Consensus 455 ~v~Q~~~l~~~-ti~~ni~~~~~-~~-----~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARa 527 (1283)
|++|++.+|.+ |++||+.++.. .. .++++.++++..++.++ ......+||||||||++||||
T Consensus 74 ~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrv~ia~a 142 (211)
T cd03298 74 MLFQENNLFAHLTVEQNVGLGLSPGLKLTAEDRQAIEVALARVGLAGL-----------EKRLPGELSGGERQRVALARV 142 (211)
T ss_pred EEecccccCCCCcHHHHHhcccccccCccHHHHHHHHHHHHHcCCHHH-----------HhCCcccCCHHHHHHHHHHHH
Confidence 99999999975 99999987642 11 12234444544444433 344456899999999999999
Q ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhc-cCEEEEEeCCEEeEec
Q 000789 528 ILKNPKILLLDEATSALDAESERIVQDALVKIMT--SRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKG 593 (1283)
Q Consensus 528 l~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g 593 (1283)
++.+|++|||||||++||+++...+.+.|+++.+ ++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 143 l~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 143 LVRDKPVLLLDEPFAALDPALRAEMLDLVLDLHAETKMTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 9999999999999999999999999999998753 6899999999999976 9999999999998764
No 473
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=6.7e-40 Score=339.06 Aligned_cols=220 Identities=26% Similarity=0.424 Sum_probs=188.1
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHH-Hhcc
Q 000789 1039 AIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSW-LRQQ 1117 (1283)
Q Consensus 1039 ~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~-lR~~ 1117 (1283)
-++++||+..|.. ..+|++|||++++||+++++||||+||||++++|+|+.+|.+|+|.++|.||+..+++. .|..
T Consensus 3 mL~v~~l~~~YG~---~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~~G~I~~~G~dit~~p~~~r~r~G 79 (237)
T COG0410 3 MLEVENLSAGYGK---IQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPRSGRIIFDGEDITGLPPHERARLG 79 (237)
T ss_pred ceeEEeEeecccc---eeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeeEEECCeecCCCCHHHHHhCC
Confidence 3789999999974 46999999999999999999999999999999999999999999999999999998766 4778
Q ss_pred eEEEccCCCCC-hhhHHHHHhcCCCCCCCHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHHHHHcc
Q 000789 1118 MGLVSQEPVLF-NETIRTNIAYGKQGGATEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLK 1196 (1283)
Q Consensus 1118 i~~V~Qdp~Lf-~gTIreNl~~g~~~~~sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiARAll~ 1196 (1283)
|+||||...+| +.||.|||.+|... ..+++-++ ..+++..+-+|. |.......+.+|||||+|-+||||||+.
T Consensus 80 i~~VPegR~iF~~LTVeENL~~g~~~-~~~~~~~~----~~~e~v~~lFP~-Lker~~~~aG~LSGGEQQMLAiaRALm~ 153 (237)
T COG0410 80 IAYVPEGRRIFPRLTVEENLLLGAYA-RRDKEAQE----RDLEEVYELFPR-LKERRNQRAGTLSGGEQQMLAIARALMS 153 (237)
T ss_pred eEeCcccccchhhCcHHHHHhhhhhc-cccccccc----ccHHHHHHHChh-HHHHhcCcccCCChHHHHHHHHHHHHhc
Confidence 99999999999 56999999876321 11111111 112233334553 5566677788999999999999999999
Q ss_pred CCCEEEEecccCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHHHhc
Q 000789 1197 NPKILLLDEATSALDAESERVVQDALERVMV--NRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDALMKI 1267 (1283)
Q Consensus 1197 ~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl~~ 1267 (1283)
+|++|+|||||.+|-|.--+.|.++|+++.+ +-||+.|-++...... +||.+||++|+|+.+|+.+||.++
T Consensus 154 ~PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~~Al~iaDr~yvle~Griv~~G~~~eL~~~ 227 (237)
T COG0410 154 RPKLLLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNARFALEIADRGYVLENGRIVLSGTAAELLAD 227 (237)
T ss_pred CCCEEEecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHHHHHHhhCEEEEEeCCEEEEecCHHHHhcC
Confidence 9999999999999999999999999999874 4599999999998765 999999999999999999999986
No 474
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.4e-40 Score=363.88 Aligned_cols=215 Identities=38% Similarity=0.562 Sum_probs=181.3
Q ss_pred EEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHHhcccE
Q 000789 375 IELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWIREKIG 454 (1283)
Q Consensus 375 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 454 (1283)
|+++|++++|++ .++++|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|+++...+.. ++.++
T Consensus 1 l~~~~l~~~~~~---~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~~G~i~~~g~~~~~~~~~--~~~i~ 75 (232)
T cd03300 1 IELENVSKFYGG---FVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPTSGEILLDGKDITNLPPH--KRPVN 75 (232)
T ss_pred CEEEeEEEEeCC---eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCChh--hcceE
Confidence 468999999964 3699999999999999999999999999999999999999999999999998766542 67899
Q ss_pred EEccCCCCCcc-cHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHhcC
Q 000789 455 LVSQEPILFAT-SLRENIAYGKEN--ATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARAILKN 531 (1283)
Q Consensus 455 ~v~Q~~~l~~~-ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARal~~~ 531 (1283)
||+|++.+|.+ |++||+.++... .+.....+ .+++.++.+ |++........+||||||||++|||||+.+
T Consensus 76 ~~~q~~~~~~~~t~~~nl~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~lS~G~~qrl~laral~~~ 148 (232)
T cd03300 76 TVFQNYALFPHLTVFENIAFGLRLKKLPKAEIKE-----RVAEALDLV--QLEGYANRKPSQLSGGQQQRVAIARALVNE 148 (232)
T ss_pred EEecccccCCCCcHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHHHHhcC
Confidence 99999999975 999999875321 11111111 122333333 555555566679999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHHhcC
Q 000789 532 PKILLLDEATSALDAESERIVQDALVKIMT--SRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDELIKD 601 (1283)
Q Consensus 532 ~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~ 601 (1283)
|+++||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 149 p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sh~~~~~~~~~d~i~~l~~G~~~~~~~~~~~~~~ 221 (232)
T cd03300 149 PKVLLLDEPLGALDLKLRKDMQLELKRLQKELGITFVFVTHDQEEALTMSDRIAVMNKGKIQQIGTPEEIYEE 221 (232)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEecCCHHHHHhC
Confidence 999999999999999999999999998764 7899999999999865 999999999999999999888754
No 475
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-39 Score=367.41 Aligned_cols=221 Identities=31% Similarity=0.484 Sum_probs=186.0
Q ss_pred ccEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCC-----CCceEEECCcccCC--CC
Q 000789 373 GEIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDP-----DAGEVLIDGIDIKK--LQ 445 (1283)
Q Consensus 373 ~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~~--~~ 445 (1283)
..|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|+++.. .+
T Consensus 19 ~~l~~~nl~~~~~~---~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~l~~~~~~ 95 (274)
T PRK14265 19 SVFEVEGVKVFYGG---FLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYRDRNIYDSQIN 95 (274)
T ss_pred ceEEEeeEEEEeCC---eEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEECCEecccccch
Confidence 36999999999963 3599999999999999999999999999999999999863 69999999999864 33
Q ss_pred HHHHhcccEEEccCCCCCcccHHHHHhcCCCCC-----CHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHH
Q 000789 446 LKWIREKIGLVSQEPILFATSLRENIAYGKENA-----TDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQ 520 (1283)
Q Consensus 446 ~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~~-----~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkq 520 (1283)
...+|++|+|++|++.+|+.|+.||+.++.... .++.+.++++.+++.+++ .......+..|||||||
T Consensus 96 ~~~~~~~i~~v~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-------~~~~~~~~~~LSgGq~q 168 (274)
T PRK14265 96 SVKLRRQVGMVFQRPNPFPKSIYENIAFAPRANGYKGNLDELVEDSLRRAAIWEEV-------KDKLKEKGTALSGGQQQ 168 (274)
T ss_pred hHHHhhcEEEEccCCccccccHHHHHHhHHHhcCchHHHHHHHHHHHHHcccchhh-------HHHhcCCcccCCHHHHH
Confidence 446788999999999999889999998863211 122334444444443322 22345667899999999
Q ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhc-cCEEEEEe---------CCEEe
Q 000789 521 RIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMTSRTTVVVAHRLTTIRN-ADLIAVVH---------QGKIV 590 (1283)
Q Consensus 521 riaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~---------~G~i~ 590 (1283)
|++|||||+.+|++|||||||++||+.+...+.+.|.++.+++|+|++||+++.+.. ||++++|+ +|+++
T Consensus 169 rv~LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~~~~~~~~G~~~ 248 (274)
T PRK14265 169 RLCIARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKEQYTIIMVTHNMQQASRVADWTAFFNTEIDEYGKRRGKLV 248 (274)
T ss_pred HHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEecccccccccCceEE
Confidence 999999999999999999999999999999999999998777899999999999865 99999998 89999
Q ss_pred EecChhHHhcCCC
Q 000789 591 EKGTHDELIKDPE 603 (1283)
Q Consensus 591 ~~g~~~~l~~~~~ 603 (1283)
+.|+.+++...+.
T Consensus 249 ~~g~~~~~~~~~~ 261 (274)
T PRK14265 249 EFSPTEQMFGSPQ 261 (274)
T ss_pred EeCCHHHHHhCCC
Confidence 9999999976543
No 476
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-39 Score=361.05 Aligned_cols=209 Identities=30% Similarity=0.488 Sum_probs=178.1
Q ss_pred EEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHHhcccE
Q 000789 375 IELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWIREKIG 454 (1283)
Q Consensus 375 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 454 (1283)
|+++||+++|++ . ..|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+.. ++.++
T Consensus 2 l~~~~l~~~~~~---~--~~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~--~~~i~ 74 (232)
T PRK10771 2 LKLTDITWLYHH---L--PMRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPASGSLTLNGQDHTTTPPS--RRPVS 74 (232)
T ss_pred eEEEEEEEEECC---c--cceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCeecCcCChh--hccEE
Confidence 689999999963 2 2499999999999999999999999999999999999999999999998765442 56899
Q ss_pred EEccCCCCCcc-cHHHHHhcCCC-CC-----CHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHH
Q 000789 455 LVSQEPILFAT-SLRENIAYGKE-NA-----TDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARA 527 (1283)
Q Consensus 455 ~v~Q~~~l~~~-ti~~ni~~~~~-~~-----~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARa 527 (1283)
|++|++.+|.+ |+.||+.++.. .. .++++.++++..++.++ +......||||||||++||||
T Consensus 75 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrv~lara 143 (232)
T PRK10771 75 MLFQENNLFSHLTVAQNIGLGLNPGLKLNAAQREKLHAIARQMGIEDL-----------LARLPGQLSGGQRQRVALARC 143 (232)
T ss_pred EEecccccccCCcHHHHHhcccccccCCCHHHHHHHHHHHHHcCcHHH-----------HhCCcccCCHHHHHHHHHHHH
Confidence 99999999985 99999987531 11 12234445555544444 444456899999999999999
Q ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHHhcC
Q 000789 528 ILKNPKILLLDEATSALDAESERIVQDALVKIMT--SRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDELIKD 601 (1283)
Q Consensus 528 l~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~ 601 (1283)
++++|+++||||||++||+.+.+.+.+.|.++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 144 l~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~g~~~~~~~~ 220 (232)
T PRK10771 144 LVREQPILLLDEPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSLEDAARIAPRSLVVADGRIAWDGPTDELLSG 220 (232)
T ss_pred HhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhC
Confidence 9999999999999999999999999999998753 6899999999999875 999999999999999999998764
No 477
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.1e-40 Score=368.41 Aligned_cols=221 Identities=29% Similarity=0.490 Sum_probs=185.3
Q ss_pred ccEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCC-----CceEEECCcccCC--CC
Q 000789 373 GEIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPD-----AGEVLIDGIDIKK--LQ 445 (1283)
Q Consensus 373 ~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~-----~G~i~~~g~~~~~--~~ 445 (1283)
+.|+++||+++|++ ..+|+|+||++++||+++|+||||||||||+++|+|+++|+ +|+|.++|+++.. .+
T Consensus 6 ~~l~~~nl~~~~~~---~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g~~i~~~~~~ 82 (261)
T PRK14258 6 PAIKVNNLSFYYDT---QKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFNQNIYERRVN 82 (261)
T ss_pred ceEEEeeEEEEeCC---eeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECCEEhhccccc
Confidence 36999999999963 35899999999999999999999999999999999999985 8999999998853 34
Q ss_pred HHHHhcccEEEccCCCCCcccHHHHHhcCCCC--C-CH----HHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHH
Q 000789 446 LKWIREKIGLVSQEPILFATSLRENIAYGKEN--A-TD----QEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQ 518 (1283)
Q Consensus 446 ~~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~~--~-~~----~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGq 518 (1283)
...+++.++|++|++.+|+.|++||+.++... . +. +.+.++++..++.+++ +...++.+.+|||||
T Consensus 83 ~~~~~~~i~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LSgGq 155 (261)
T PRK14258 83 LNRLRRQVSMVHPKPNLFPMSVYDNVAYGVKIVGWRPKLEIDDIVESALKDADLWDEI-------KHKIHKSALDLSGGQ 155 (261)
T ss_pred hHHhhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcchh-------hhHhcCCcccCCHHH
Confidence 45678899999999999999999999875211 1 11 2233344444333222 234566778999999
Q ss_pred HHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc--CCCeEEEEecCchhhhc-cCEEEEEeC-----CEEe
Q 000789 519 KQRIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIM--TSRTTVVVAHRLTTIRN-ADLIAVVHQ-----GKIV 590 (1283)
Q Consensus 519 kqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~vl~~-----G~i~ 590 (1283)
|||++|||||+++|++|||||||++||+.+.+.+.+.|+++. .++|+|+|||+++.+.. ||+|++|++ |+++
T Consensus 156 ~qrv~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiiivsH~~~~i~~~~d~i~~l~~~~~~~G~i~ 235 (261)
T PRK14258 156 QQRLCIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSELTMVIVSHNLHQVSRLSDFTAFFKGNENRIGQLV 235 (261)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhcCEEEEEccCCCcCceEE
Confidence 999999999999999999999999999999999999999864 37899999999999875 999999999 9999
Q ss_pred EecChhHHhcCCC
Q 000789 591 EKGTHDELIKDPE 603 (1283)
Q Consensus 591 ~~g~~~~l~~~~~ 603 (1283)
+.|+++++...+.
T Consensus 236 ~~~~~~~~~~~~~ 248 (261)
T PRK14258 236 EFGLTKKIFNSPH 248 (261)
T ss_pred EeCCHHHHHhCCC
Confidence 9999999976543
No 478
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=9.7e-40 Score=366.02 Aligned_cols=227 Identities=30% Similarity=0.407 Sum_probs=185.7
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCC----CcceEEECCccCCCCChHHH
Q 000789 1039 AIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDP----DSGHVLLDNIELPKFKLSWL 1114 (1283)
Q Consensus 1039 ~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~----~~G~I~idG~di~~~~~~~l 1114 (1283)
.|+++||+++| + .++|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.+||.++... +..
T Consensus 4 ~l~~~~l~~~~-~---~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g~~i~~~--~~~ 77 (254)
T PRK10418 4 QIELRNIALQA-A---QPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDGKPVAPC--ALR 77 (254)
T ss_pred EEEEeCeEEEe-c---cceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECCeecccc--ccc
Confidence 48999999999 2 2599999999999999999999999999999999999999 999999999998632 223
Q ss_pred hcceEEEccCCC-CCh--hhHHHHHhcC---CCCCCCHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHH
Q 000789 1115 RQQMGLVSQEPV-LFN--ETIRTNIAYG---KQGGATEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRI 1188 (1283)
Q Consensus 1115 R~~i~~V~Qdp~-Lf~--gTIreNl~~g---~~~~~sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRl 1188 (1283)
++.++||||++. .|. .|+.+|+.+. ......++++.++++..++.++ ++.++.....||||||||+
T Consensus 78 ~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~--------~~~~~~~~~~LS~Gq~qrv 149 (254)
T PRK10418 78 GRKIATIMQNPRSAFNPLHTMHTHARETCLALGKPADDATLTAALEAVGLENA--------ARVLKLYPFEMSGGMLQRM 149 (254)
T ss_pred cceEEEEecCCccccCccccHHHHHHHHHHHcCCChHHHHHHHHHHHcCCCCh--------hhhhhcCCcccCHHHHHHH
Confidence 467999999985 343 5888886431 0112344567777777766432 1233455568999999999
Q ss_pred HHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHHH
Q 000789 1189 AIARAVLKNPKILLLDEATSALDAESERVVQDALERVMV--NRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDALM 1265 (1283)
Q Consensus 1189 aiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl 1265 (1283)
+|||||+++|+||||||||++||+.+.+.+.+.|+++.+ ++|+|+|||+++.+.. ||++++|++|++++.|+++++.
T Consensus 150 ~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~~g~til~~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 229 (254)
T PRK10418 150 MIALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQKRALGMLLVTHDMGVVARLADDVAVMSHGRIVEQGDVETLF 229 (254)
T ss_pred HHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHh
Confidence 999999999999999999999999999999999998753 7899999999999865 9999999999999999999998
Q ss_pred hccCc-hhHHHHHHh
Q 000789 1266 KITDG-AYASLVALH 1279 (1283)
Q Consensus 1266 ~~~~g-~y~~L~~~~ 1279 (1283)
+.+.. .++.++..+
T Consensus 230 ~~~~~~~~~~~~~~~ 244 (254)
T PRK10418 230 NAPKHAVTRSLVSAH 244 (254)
T ss_pred hCCCCHHHHHHHHhh
Confidence 75444 344455443
No 479
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=7.2e-40 Score=368.47 Aligned_cols=221 Identities=24% Similarity=0.366 Sum_probs=185.8
Q ss_pred EEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCC--------CceEEECCcccCCCCH
Q 000789 375 IELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPD--------AGEVLIDGIDIKKLQL 446 (1283)
Q Consensus 375 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~--------~G~i~~~g~~~~~~~~ 446 (1283)
|+++|++++|++ .++|+|+||+|++|++++|+||||||||||+++|+|+++|+ +|+|.++|.++...+.
T Consensus 2 l~~~nl~~~~~~---~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~ 78 (272)
T PRK13547 2 LTADHLHVARRH---RAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDA 78 (272)
T ss_pred eEEEEEEEEECC---EeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCH
Confidence 789999999963 36999999999999999999999999999999999999998 9999999999988877
Q ss_pred HHHhcccEEEccCCC-CCcccHHHHHhcCCCCC-CHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHH
Q 000789 447 KWIREKIGLVSQEPI-LFATSLRENIAYGKENA-TDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAI 524 (1283)
Q Consensus 447 ~~~r~~i~~v~Q~~~-l~~~ti~~ni~~~~~~~-~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriai 524 (1283)
..+++.++|++|++. +|..|++||+.++.... .............+.+.++.+ |+++..+....+||||||||++|
T Consensus 79 ~~~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~l 156 (272)
T PRK13547 79 PRLARLRAVLPQAAQPAFAFSAREIVLLGRYPHARRAGALTHRDGEIAWQALALA--GATALVGRDVTTLSGGELARVQF 156 (272)
T ss_pred HHHHhhcEEecccCCCCCCCcHHHHHhhcccccccccccCCHHHHHHHHHHHHHc--CcHhhhcCCcccCCHHHHHHHHH
Confidence 778888999999986 56789999998863211 000000000111223445555 77777788889999999999999
Q ss_pred HHHHh---------cCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhc-cCEEEEEeCCEEeEe
Q 000789 525 ARAIL---------KNPKILLLDEATSALDAESERIVQDALVKIMT--SRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEK 592 (1283)
Q Consensus 525 ARal~---------~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~ 592 (1283)
||||+ .+|++|||||||++||+.+.+.+.+.|+++.+ ++|+|+|||+++.+.. ||++++|++|+|++.
T Consensus 157 aral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~~~~~~~d~i~~l~~G~i~~~ 236 (272)
T PRK13547 157 ARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPNLAARHADRIAMLADGAIVAH 236 (272)
T ss_pred HHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeEEEe
Confidence 99999 59999999999999999999999999998754 6899999999999865 999999999999999
Q ss_pred cChhHHhc
Q 000789 593 GTHDELIK 600 (1283)
Q Consensus 593 g~~~~l~~ 600 (1283)
|++++++.
T Consensus 237 g~~~~~~~ 244 (272)
T PRK13547 237 GAPADVLT 244 (272)
T ss_pred cCHHHHcC
Confidence 99988864
No 480
>cd03246 ABCC_Protease_Secretion This family represents the ABC component of the protease secretion system PrtD, a 60-kDa integral membrane protein sharing 37% identity with HlyB, the ABC component of the alpha-hemolysin secretion pathway, in the C-terminal domain. They export degradative enzymes by using a type I protein secretion system and lack an N-terminal signal peptide, but contain a C-terminal secretion signal. The Type I secretion apparatus is made up of three components, an ABC transporter, a membrane fusion protein (MFP), and an outer membrane protein (OMP). For the HlyA transporter complex, HlyB (ABC transporter) and HlyD (MFP) reside in the inner membrane of E. coli. The OMP component is TolC, which is thought to interact with the MFP to form a continuous channel across the periplasm from the cytoplasm to the exterior. HlyB belongs to the family of ABC transporters, which are ubiquitous, ATP-dependent transmembrane pumps or channels. The spectrum of transport substra
Probab=100.00 E-value=5.5e-40 Score=345.73 Aligned_cols=172 Identities=40% Similarity=0.697 Sum_probs=161.4
Q ss_pred EEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHHhcccE
Q 000789 375 IELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWIREKIG 454 (1283)
Q Consensus 375 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 454 (1283)
|+++|++++|++. +.++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.+||.++.+.+...++++++
T Consensus 1 i~~~~l~~~~~~~-~~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (173)
T cd03246 1 LEVENVSFRYPGA-EPPVLRNVSFSIEPGESLAIIGPSGSGKSTLARLILGLLRPTSGRVRLDGADISQWDPNELGDHVG 79 (173)
T ss_pred CEEEEEEEEcCCC-CCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEEcccCCHHHHHhheE
Confidence 4789999999742 246999999999999999999999999999999999999999999999999998888888889999
Q ss_pred EEccCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHhcCCCE
Q 000789 455 LVSQEPILFATSLRENIAYGKENATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARAILKNPKI 534 (1283)
Q Consensus 455 ~v~Q~~~l~~~ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARal~~~~~i 534 (1283)
|++|++.+|+.|++||+ ||||||||++|||||+.+|++
T Consensus 80 ~~~q~~~~~~~tv~~~l------------------------------------------LS~G~~qrv~la~al~~~p~~ 117 (173)
T cd03246 80 YLPQDDELFSGSIAENI------------------------------------------LSGGQRQRLGLARALYGNPRI 117 (173)
T ss_pred EECCCCccccCcHHHHC------------------------------------------cCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999998 999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHcC-CCeEEEEecCchhhhccCEEEEEeCCEE
Q 000789 535 LLLDEATSALDAESERIVQDALVKIMT-SRTTVVVAHRLTTIRNADLIAVVHQGKI 589 (1283)
Q Consensus 535 lllDE~ts~lD~~~~~~i~~~l~~~~~-~~t~i~itH~l~~~~~~d~i~vl~~G~i 589 (1283)
|||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+..||++++|++|++
T Consensus 118 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i 173 (173)
T cd03246 118 LVLDEPNSHLDVEGERALNQAIAALKAAGATRIVIAHRPETLASADRILVLEDGRV 173 (173)
T ss_pred EEEECCccccCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhCCEEEEEECCCC
Confidence 999999999999999999999998754 6899999999999888999999999974
No 481
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=6.9e-40 Score=358.15 Aligned_cols=205 Identities=36% Similarity=0.585 Sum_probs=174.3
Q ss_pred EEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCC--CCHHHHhcc
Q 000789 375 IELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKK--LQLKWIREK 452 (1283)
Q Consensus 375 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~--~~~~~~r~~ 452 (1283)
|+++||+++|++ .++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|+++.. .+...++++
T Consensus 1 l~~~~l~~~~~~---~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 77 (213)
T cd03262 1 IEIKNLHKSFGD---FHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPDSGTIIIDGLKLTDDKKNINELRQK 77 (213)
T ss_pred CEEEEEEEEECC---eEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccchhHHHHHhc
Confidence 478999999964 359999999999999999999999999999999999999999999999998853 344567889
Q ss_pred cEEEccCCCCCc-ccHHHHHhcCCC---CCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHH
Q 000789 453 IGLVSQEPILFA-TSLRENIAYGKE---NATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARAI 528 (1283)
Q Consensus 453 i~~v~Q~~~l~~-~ti~~ni~~~~~---~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARal 528 (1283)
++|++|++.+|. .|++||+.++.. ..+.++..+ .+.+.++.+ |++..+.....+||||||||++||||+
T Consensus 78 i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~la~al 150 (213)
T cd03262 78 VGMVFQQFNLFPHLTVLENITLAPIKVKGMSKAEAEE-----RALELLEKV--GLADKADAYPAQLSGGQQQRVAIARAL 150 (213)
T ss_pred ceEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHH-----HHHHHHHHc--CCHhHhhhCccccCHHHHHHHHHHHHH
Confidence 999999999887 599999987532 122222111 123445555 666666777789999999999999999
Q ss_pred hcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC-CCeEEEEecCchhhhc-cCEEEEEeCCEE
Q 000789 529 LKNPKILLLDEATSALDAESERIVQDALVKIMT-SRTTVVVAHRLTTIRN-ADLIAVVHQGKI 589 (1283)
Q Consensus 529 ~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~-~~t~i~itH~l~~~~~-~d~i~vl~~G~i 589 (1283)
+.+|++|||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+.. ||+|++|++|++
T Consensus 151 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~~~~~~~d~i~~l~~g~i 213 (213)
T cd03262 151 AMNPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMGFAREVADRVIFMDDGRI 213 (213)
T ss_pred hcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 999999999999999999999999999998864 6899999999999975 999999999974
No 482
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=9.2e-40 Score=362.28 Aligned_cols=215 Identities=36% Similarity=0.585 Sum_probs=182.8
Q ss_pred EEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHHhcccE
Q 000789 375 IELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWIREKIG 454 (1283)
Q Consensus 375 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 454 (1283)
|+++|++++|++ +++|+|+||++.+||+++|+||||||||||+++|+|+++|++|+|.+||.++...+. .++.++
T Consensus 1 i~i~~l~~~~~~---~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~i~g~~~~~~~~--~~~~i~ 75 (237)
T TIGR00968 1 IEIANISKRFGS---FQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPDSGRIRLNGQDATRVHA--RDRKIG 75 (237)
T ss_pred CEEEEEEEEECC---eeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCh--hhcCEE
Confidence 478999999974 369999999999999999999999999999999999999999999999999876543 467899
Q ss_pred EEccCCCCCcc-cHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHhcC
Q 000789 455 LVSQEPILFAT-SLRENIAYGKEN--ATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARAILKN 531 (1283)
Q Consensus 455 ~v~Q~~~l~~~-ti~~ni~~~~~~--~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARal~~~ 531 (1283)
|+||++.+|++ |+.||+.++.+. .+..+.. ..+.+.++.+ |+.........+||||||||++|||||+++
T Consensus 76 ~~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~lS~G~~qrl~laral~~~ 148 (237)
T TIGR00968 76 FVFQHYALFKHLTVRDNIAFGLEIRKHPKAKIK-----ARVEELLELV--QLEGLGDRYPNQLSGGQRQRVALARALAVE 148 (237)
T ss_pred EEecChhhccCCcHHHHHHhHHHhcCCCHHHHH-----HHHHHHHHHc--CCHhHhhCChhhCCHHHHHHHHHHHHHhcC
Confidence 99999999975 999999876431 1111111 1223455555 444445556679999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHHhcC
Q 000789 532 PKILLLDEATSALDAESERIVQDALVKIMT--SRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDELIKD 601 (1283)
Q Consensus 532 ~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~ 601 (1283)
|+++||||||++||+++++.+.+.|.++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 149 p~llllDEP~~~LD~~~~~~~~~~l~~~~~~~~~tvli~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~~~ 221 (237)
T TIGR00968 149 PQVLLLDEPFGALDAKVRKELRSWLRKLHDEVHVTTVFVTHDQEEAMEVADRIVVMSNGKIEQIGSPDEVYDH 221 (237)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEECCEEEEecCHHHHHcC
Confidence 999999999999999999999999998754 6899999999999866 999999999999999999998754
No 483
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=1e-39 Score=368.08 Aligned_cols=222 Identities=25% Similarity=0.463 Sum_probs=181.0
Q ss_pred cEEEEEEEEECCCC------CCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHH
Q 000789 374 EIELRDVYFRYPAR------PEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLK 447 (1283)
Q Consensus 374 ~i~~~~v~f~y~~~------~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~ 447 (1283)
.|+++||+++|+.. .+.++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+..
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~ 83 (267)
T PRK15112 4 LLEVRNLSKTFRYRTGWFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPTSGELLIDDHPLHFGDYS 83 (267)
T ss_pred eEEEeceEEEecCCCCcccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCchh
Confidence 48999999999631 124699999999999999999999999999999999999999999999999998765555
Q ss_pred HHhcccEEEccCCC--CCcc-cHHHHHhcCCC---CCCHHHHHHHHHHhcHHHHHHhCCCCcc-ccccCCCCCCChHHHH
Q 000789 448 WIREKIGLVSQEPI--LFAT-SLRENIAYGKE---NATDQEIRTAIELANAAKFIDKLPKGLD-TMAGEHGTQLSGGQKQ 520 (1283)
Q Consensus 448 ~~r~~i~~v~Q~~~--l~~~-ti~~ni~~~~~---~~~~~~~~~~~~~~~~~~~i~~lp~g~~-t~~~~~g~~LSgGqkq 520 (1283)
..++.++||+|++. +++. |+.+|+.++.. .....+..+ .+.+.++.+ |++ ........+|||||||
T Consensus 84 ~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~~LS~G~~q 156 (267)
T PRK15112 84 YRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNTDLEPEQREK-----QIIETLRQV--GLLPDHASYYPHMLAPGQKQ 156 (267)
T ss_pred hHhccEEEEecCchhhcCcchhHHHHHHHHHHhccCCCHHHHHH-----HHHHHHHHc--CCChHHHhcCchhcCHHHHH
Confidence 66678999999985 4443 89999875321 111111111 122333333 442 2234455789999999
Q ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhH
Q 000789 521 RIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMT--SRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDE 597 (1283)
Q Consensus 521 riaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~ 597 (1283)
|++|||||+.+|+||||||||++||+.+.+.+.+.|.++.+ ++|+|++||+++.+.. ||+|++|++|++++.|++++
T Consensus 157 rv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 236 (267)
T PRK15112 157 RLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHLGMMKHISDQVLVMHQGEVVERGSTAD 236 (267)
T ss_pred HHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEecCCHHH
Confidence 99999999999999999999999999999999999998753 6899999999999986 99999999999999999999
Q ss_pred HhcCC
Q 000789 598 LIKDP 602 (1283)
Q Consensus 598 l~~~~ 602 (1283)
+...+
T Consensus 237 ~~~~~ 241 (267)
T PRK15112 237 VLASP 241 (267)
T ss_pred HhcCC
Confidence 98753
No 484
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=5.8e-41 Score=335.03 Aligned_cols=222 Identities=25% Similarity=0.469 Sum_probs=193.2
Q ss_pred cEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHH-Hhcc
Q 000789 374 EIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKW-IREK 452 (1283)
Q Consensus 374 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~-~r~~ 452 (1283)
.+..+|+.++|.. ++|++||||++++||+|++.||||+||||.+.++.|+.+|++|+|.+||.|++.++... -|-.
T Consensus 4 ~L~a~~l~K~y~k---r~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~d~G~i~ld~~diT~lPm~~RArlG 80 (243)
T COG1137 4 TLVAENLAKSYKK---RKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRPDSGKILLDDEDITKLPMHKRARLG 80 (243)
T ss_pred EEEehhhhHhhCC---eeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEecCCceEEECCcccccCChHHHhhcC
Confidence 5788999999964 46999999999999999999999999999999999999999999999999999999765 4568
Q ss_pred cEEEccCCCCCcc-cHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHhcC
Q 000789 453 IGLVSQEPILFAT-SLRENIAYGKENATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARAILKN 531 (1283)
Q Consensus 453 i~~v~Q~~~l~~~-ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARal~~~ 531 (1283)
|||+||||.+|.+ ||+|||..-.+. ...+...+.+...+++.++.+ ++...-...+.+||||||+|+.|||||..+
T Consensus 81 igYLpQE~SIFr~LtV~dNi~~vlE~-~~~d~~~~~~~~~l~~LL~ef--~i~hlr~~~a~sLSGGERRR~EIARaLa~~ 157 (243)
T COG1137 81 IGYLPQEASIFRKLTVEDNIMAVLEI-REKDLKKAERKEELDALLEEF--HITHLRDSKAYSLSGGERRRVEIARALAAN 157 (243)
T ss_pred cccccccchHhhcCcHHHHHHHHHhh-hhcchhHHHHHHHHHHHHHHh--chHHHhcCcccccccchHHHHHHHHHHhcC
Confidence 9999999999987 999999875432 121222334444555666666 777888889999999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHcC-CCeEEEEecCch-hhhccCEEEEEeCCEEeEecChhHHhcC
Q 000789 532 PKILLLDEATSALDAESERIVQDALVKIMT-SRTTVVVAHRLT-TIRNADLIAVVHQGKIVEKGTHDELIKD 601 (1283)
Q Consensus 532 ~~illlDE~ts~lD~~~~~~i~~~l~~~~~-~~t~i~itH~l~-~~~~~d~i~vl~~G~i~~~g~~~~l~~~ 601 (1283)
|+.++||||++++||.+...|++.++.+.. +--+++.-|+.. ++.-|||.+++.+|+|..+|+++|+.++
T Consensus 158 P~fiLLDEPFAGVDPiaV~dIq~iI~~L~~rgiGvLITDHNVREtL~i~dRaYIi~~G~vla~G~p~ei~~n 229 (243)
T COG1137 158 PKFILLDEPFAGVDPIAVIDIQRIIKHLKDRGIGVLITDHNVRETLDICDRAYIISDGKVLAEGSPEEIVNN 229 (243)
T ss_pred CCEEEecCCccCCCchhHHHHHHHHHHHHhCCceEEEccccHHHHHhhhheEEEEecCeEEecCCHHHHhcC
Confidence 999999999999999999999999999864 567777779986 4677999999999999999999999987
No 485
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=9.4e-40 Score=369.88 Aligned_cols=215 Identities=30% Similarity=0.492 Sum_probs=187.3
Q ss_pred cEEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHhcce
Q 000789 1039 AIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQM 1118 (1283)
Q Consensus 1039 ~I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i 1118 (1283)
.|+++||+.+|+. ...+|+||||+|++||.+|++||||||||||+++|+|+..|++|+|.++|.|...- ...+|++|
T Consensus 4 ~i~~~~l~k~~~~--~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~~G~i~i~G~~~~~~-~~~~~~~i 80 (293)
T COG1131 4 VIEVRNLTKKYGG--DKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPTSGEILVLGYDVVKE-PAKVRRRI 80 (293)
T ss_pred eeeecceEEEeCC--CCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCceEEEEcCEeCccC-HHHHHhhe
Confidence 4789999999973 23699999999999999999999999999999999999999999999999988664 67889999
Q ss_pred EEEccCCCCC-hhhHHHHHhcCC-----CCCCCHHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHHH
Q 000789 1119 GLVSQEPVLF-NETIRTNIAYGK-----QGGATEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIAR 1192 (1283)
Q Consensus 1119 ~~V~Qdp~Lf-~gTIreNl~~g~-----~~~~sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiAR 1192 (1283)
|||||+|.++ .-|++|||.|.. .....++.+.+.++..++.+.- +.. ...||+|||||++||+
T Consensus 81 gy~~~~~~~~~~lT~~e~l~~~~~l~~~~~~~~~~~~~~~l~~~~L~~~~-------~~~----~~~lS~G~kqrl~ia~ 149 (293)
T COG1131 81 GYVPQEPSLYPELTVRENLEFFARLYGLSKEEAEERIEELLELFGLEDKA-------NKK----VRTLSGGMKQRLSIAL 149 (293)
T ss_pred EEEccCCCCCccccHHHHHHHHHHHhCCChhHHHHHHHHHHHHcCCchhh-------Ccc----hhhcCHHHHHHHHHHH
Confidence 9999999877 459999997531 1112345778888888776521 222 3479999999999999
Q ss_pred HHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcC-C-ceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHHHhc
Q 000789 1193 AVLKNPKILLLDEATSALDAESERVVQDALERVMV-N-RTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDALMKI 1267 (1283)
Q Consensus 1193 All~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~-~-~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl~~ 1267 (1283)
||+.+|++|||||||++||+.+...+++.|+++.+ + +||++.||.++.+.. ||+|++|++|+++.+|+++++...
T Consensus 150 aL~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~e~~~~~d~v~il~~G~~~~~g~~~~l~~~ 227 (293)
T COG1131 150 ALLHDPELLILDEPTSGLDPESRREIWELLRELAKEGGVTILLSTHILEEAEELCDRVIILNDGKIIAEGTPEELKEK 227 (293)
T ss_pred HHhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHHHHHHhCCEEEEEeCCEEEEeCCHHHHHHh
Confidence 99999999999999999999999999999999875 4 699999999999988 999999999999999999998764
No 486
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.5e-40 Score=365.68 Aligned_cols=227 Identities=29% Similarity=0.524 Sum_probs=187.3
Q ss_pred ccEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECC------cccCCCCH
Q 000789 373 GEIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDG------IDIKKLQL 446 (1283)
Q Consensus 373 ~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g------~~~~~~~~ 446 (1283)
..|+++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++| +++...+.
T Consensus 9 ~~i~~~~~~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~iaG~~~~~~G~v~~~G~~~~~g~~~~~~~~ 85 (257)
T PRK14246 9 DVFNISRLYLYIND---KAILKDITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIEIYDSKIKVDGKVLYFGKDIFQIDA 85 (257)
T ss_pred hheeeeeEEEecCC---ceeEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCcCceeEcCEEEECCcccccCCH
Confidence 45999999999964 3689999999999999999999999999999999999999996666554 67766677
Q ss_pred HHHhcccEEEccCCCCCcc-cHHHHHhcCCC--CC-CHHHHHHHHHHhcHHHHHHhCCCCcc----ccccCCCCCCChHH
Q 000789 447 KWIREKIGLVSQEPILFAT-SLRENIAYGKE--NA-TDQEIRTAIELANAAKFIDKLPKGLD----TMAGEHGTQLSGGQ 518 (1283)
Q Consensus 447 ~~~r~~i~~v~Q~~~l~~~-ti~~ni~~~~~--~~-~~~~~~~~~~~~~~~~~i~~lp~g~~----t~~~~~g~~LSgGq 518 (1283)
..+|++++|++|++.+|.+ |++||+.++.. .. .+++..+. +.+.++.+ |++ ...++.+..|||||
T Consensus 86 ~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~-----~~~~~~~~--~l~~~~~~~~~~~~~~LS~G~ 158 (257)
T PRK14246 86 IKLRKEVGMVFQQPNPFPHLSIYDNIAYPLKSHGIKEKREIKKI-----VEECLRKV--GLWKEVYDRLNSPASQLSGGQ 158 (257)
T ss_pred HHHhcceEEEccCCccCCCCcHHHHHHHHHHhcCCCCHHHHHHH-----HHHHHHHc--CCCccchhhhcCCcccCCHHH
Confidence 7788999999999999976 99999997532 11 22222111 11222333 332 23456778999999
Q ss_pred HHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhH
Q 000789 519 KQRIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMTSRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDE 597 (1283)
Q Consensus 519 kqriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~ 597 (1283)
|||++||||++.+|+++||||||++||+.+++.+.+.|.++.+++|+|++||+++.+.. ||++++|++|++++.|++++
T Consensus 159 ~qrl~laral~~~P~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiilvsh~~~~~~~~~d~v~~l~~g~i~~~g~~~~ 238 (257)
T PRK14246 159 QQRLTIARALALKPKVLLMDEPTSMIDIVNSQAIEKLITELKNEIAIVIVSHNPQQVARVADYVAFLYNGELVEWGSSNE 238 (257)
T ss_pred HHHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCcEEEEEECCHHHHHHhCCEEEEEECCEEEEECCHHH
Confidence 99999999999999999999999999999999999999988777999999999999954 99999999999999999999
Q ss_pred HhcCCCChhHHH
Q 000789 598 LIKDPEGPYTQL 609 (1283)
Q Consensus 598 l~~~~~~~~~~~ 609 (1283)
+.+++...|.+.
T Consensus 239 ~~~~~~~~~~~~ 250 (257)
T PRK14246 239 IFTSPKNELTEK 250 (257)
T ss_pred HHhCCCcHHHHH
Confidence 987655445443
No 487
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=1e-39 Score=367.98 Aligned_cols=229 Identities=28% Similarity=0.424 Sum_probs=186.7
Q ss_pred EEEEEEEEECCCC------CCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCCh--
Q 000789 1040 IELRCVSFKYPTR------PDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKL-- 1111 (1283)
Q Consensus 1040 I~~~nVsf~Y~~~------~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~-- 1111 (1283)
|+++||+|+|+.. .+.++++|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.+||.++.+++.
T Consensus 4 l~~~nl~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~sG~i~~~g~~~~~~~~~~ 83 (268)
T PRK10419 4 LNVSGLSHHYAHGGLSGKHQHQTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLESPSQGNVSWRGEPLAKLNRAQ 83 (268)
T ss_pred EEEeceEEEecCCccccccCceeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEeccccChhH
Confidence 8999999999731 02469999999999999999999999999999999999999999999999999987765
Q ss_pred -HHHhcceEEEccCCC--CC-hhhHHHHHhcCCC--CCCCHHHHHHHHHHhChHHHHHhCCCCccc-ccCCCCCCCChhH
Q 000789 1112 -SWLRQQMGLVSQEPV--LF-NETIRTNIAYGKQ--GGATEEEIIAATEASNAHNFISALPHGYET-NVGERGVQLSGGQ 1184 (1283)
Q Consensus 1112 -~~lR~~i~~V~Qdp~--Lf-~gTIreNl~~g~~--~~~sd~ei~~al~~a~l~~~I~~lp~Gldt-~vge~G~~LSgGQ 1184 (1283)
..+|+.++|+||++. ++ ..|+++|+.+... .+.+.++ ....+.+.+..+ |+++ ........|||||
T Consensus 84 ~~~~~~~i~~v~q~~~~~~~~~~t~~~~l~~~~~~~~~~~~~~-----~~~~~~~~l~~~--gl~~~~~~~~~~~LS~Ge 156 (268)
T PRK10419 84 RKAFRRDIQMVFQDSISAVNPRKTVREIIREPLRHLLSLDKAE-----RLARASEMLRAV--DLDDSVLDKRPPQLSGGQ 156 (268)
T ss_pred HHHHHhcEEEEEcChhhccCCCCCHHHHHHHHHHhhccCCHHH-----HHHHHHHHHHHc--CCChhHhhCCCccCChHH
Confidence 357889999999983 43 4799999864210 0111111 111233444443 5543 3455667899999
Q ss_pred HHHHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchHHhh-cCEEEEEeCCEEEEecCh
Q 000789 1185 KQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMV--NRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSH 1261 (1283)
Q Consensus 1185 rQRlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~ 1261 (1283)
|||++|||||+.+|+||||||||++||+++...+.+.|+++.+ ++|+|+|||+++.+.. ||+|++|++|++++.|++
T Consensus 157 ~qrl~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g~~ 236 (268)
T PRK10419 157 LQRVCLARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLRLVERFCQRVMVMDNGQIVETQPV 236 (268)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHHcCcEEEEEECCHHHHHHhCCEEEEEECCEEeeeCCh
Confidence 9999999999999999999999999999999999999998753 7899999999999975 999999999999999999
Q ss_pred HHHHhccCchhHHHH
Q 000789 1262 DALMKITDGAYASLV 1276 (1283)
Q Consensus 1262 ~eLl~~~~g~y~~L~ 1276 (1283)
+++... ++.|..-+
T Consensus 237 ~~~~~~-~~~~~~~~ 250 (268)
T PRK10419 237 GDKLTF-SSPAGRVL 250 (268)
T ss_pred hhccCC-CCHHHHHH
Confidence 999874 66554433
No 488
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-39 Score=365.78 Aligned_cols=220 Identities=30% Similarity=0.488 Sum_probs=183.1
Q ss_pred cEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCC--C---CCceEEECCcccCC--CCH
Q 000789 374 EIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYD--P---DAGEVLIDGIDIKK--LQL 446 (1283)
Q Consensus 374 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~--~---~~G~i~~~g~~~~~--~~~ 446 (1283)
.|+++||+++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++ | ++|+|.++|+++.. .+.
T Consensus 5 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 81 (252)
T PRK14255 5 IITSSDVHLFYGK---FEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRGQNIYAPNEDV 81 (252)
T ss_pred eEEEEeEEEEECC---eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcCEEcccccccH
Confidence 4899999999973 369999999999999999999999999999999999975 5 59999999998864 234
Q ss_pred HHHhcccEEEccCCCCCcccHHHHHhcCCC--CC-CH----HHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHH
Q 000789 447 KWIREKIGLVSQEPILFATSLRENIAYGKE--NA-TD----QEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQK 519 (1283)
Q Consensus 447 ~~~r~~i~~v~Q~~~l~~~ti~~ni~~~~~--~~-~~----~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqk 519 (1283)
..+++.++|++|++.+|+.|+++|+.++.. .. .. +++.++++.+++. +++.......+.+||||||
T Consensus 82 ~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-------~~i~~~~~~~~~~LS~Gq~ 154 (252)
T PRK14255 82 VQLRKQVGMVFQQPNPFPFSIYENVIYGLRLAGVKDKAVLDEAVETSLKQAAIW-------DEVKDHLHESALSLSGGQQ 154 (252)
T ss_pred HHhcCeEEEEECCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCc-------cchhhHHhcCcccCCHHHH
Confidence 566789999999999999999999987521 11 11 1222223333221 1223345667789999999
Q ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHH
Q 000789 520 QRIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMTSRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDEL 598 (1283)
Q Consensus 520 qriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l 598 (1283)
||++|||||+.+|++|||||||++||+.+.+.+.+.|+++.++.|+|+|||+++.+.. ||+|++|++|++++.|+..++
T Consensus 155 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 234 (252)
T PRK14255 155 QRVCIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRDQYTIILVTHSMHQASRISDKTAFFLTGNLIEFADTKQM 234 (252)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998767899999999999865 999999999999999999998
Q ss_pred hcCCC
Q 000789 599 IKDPE 603 (1283)
Q Consensus 599 ~~~~~ 603 (1283)
..++.
T Consensus 235 ~~~~~ 239 (252)
T PRK14255 235 FLNPK 239 (252)
T ss_pred hcCCC
Confidence 76643
No 489
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.6e-40 Score=365.59 Aligned_cols=203 Identities=27% Similarity=0.409 Sum_probs=172.3
Q ss_pred EEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHhcceE
Q 000789 1040 IELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMG 1119 (1283)
Q Consensus 1040 I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~ 1119 (1283)
|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++... ++.++
T Consensus 2 l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~-----~~~~~ 73 (255)
T PRK11248 2 LQISHLYADYGG---KPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSITLDGKPVEGP-----GAERG 73 (255)
T ss_pred EEEEEEEEEeCC---eeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCC-----CCcEE
Confidence 789999999974 3599999999999999999999999999999999999999999999999988642 34689
Q ss_pred EEccCCCCCh-hhHHHHHhcCCC-CCCCH----HHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHHHH
Q 000789 1120 LVSQEPVLFN-ETIRTNIAYGKQ-GGATE----EEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARA 1193 (1283)
Q Consensus 1120 ~V~Qdp~Lf~-gTIreNl~~g~~-~~~sd----~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiARA 1193 (1283)
|+||++.+|. .|++||+.++.. ...+. +++.++++..++.+... ....+||||||||++||||
T Consensus 74 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~-----------~~~~~LSgGq~qrl~lara 142 (255)
T PRK11248 74 VVFQNEGLLPWRNVQDNVAFGLQLAGVEKMQRLEIAHQMLKKVGLEGAEK-----------RYIWQLSGGQRQRVGIARA 142 (255)
T ss_pred EEeCCCccCCCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCChhHhh-----------CChhhCCHHHHHHHHHHHH
Confidence 9999999886 699999976421 11222 33555666665544332 3345899999999999999
Q ss_pred HccCCCEEEEecccCCCCHHHHHHHHHHHHHHc--CCceEEEEecCchHHhh-cCEEEEEe--CCEEEEecCh
Q 000789 1194 VLKNPKILLLDEATSALDAESERVVQDALERVM--VNRTTVVVAHRLTTIKN-ADIIAVVK--NGVIAEQGSH 1261 (1283)
Q Consensus 1194 ll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~--~~~TvI~IaHrl~ti~~-~D~I~vl~--~G~Ive~Gt~ 1261 (1283)
|+++|++|||||||++||+.+...+.+.|+++. .++|+|+|||+++.+.. ||+|++|+ +|++++.++.
T Consensus 143 l~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 215 (255)
T PRK11248 143 LAANPQLLLLDEPFGALDAFTREQMQTLLLKLWQETGKQVLLITHDIEEAVFMATELVLLSPGPGRVVERLPL 215 (255)
T ss_pred HhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCcEEEEEecC
Confidence 999999999999999999999999999999873 37999999999999866 99999998 5999998754
No 490
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=6.8e-40 Score=361.04 Aligned_cols=214 Identities=28% Similarity=0.442 Sum_probs=173.8
Q ss_pred EEEEEEEEECCCCC-CCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCC---CCCceEEECCcccCCCCHHHHh
Q 000789 375 IELRDVYFRYPARP-EVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYD---PDAGEVLIDGIDIKKLQLKWIR 450 (1283)
Q Consensus 375 i~~~~v~f~y~~~~-~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~---~~~G~i~~~g~~~~~~~~~~~r 450 (1283)
++++||+|.|++.+ .+++|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|+++. ...+|
T Consensus 4 ~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~~---~~~~~ 80 (226)
T cd03234 4 LPWWDVGLKAKNWNKYARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPRK---PDQFQ 80 (226)
T ss_pred ceeecceeeeecCccccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEECC---hHHhc
Confidence 57999999997542 3579999999999999999999999999999999999999 99999999999875 24567
Q ss_pred cccEEEccCCCCCcc-cHHHHHhcCCCCCCHHHHHHHHHHhcHHH-HHHhCCCCccccccCCCCCCChHHHHHHHHHHHH
Q 000789 451 EKIGLVSQEPILFAT-SLRENIAYGKENATDQEIRTAIELANAAK-FIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARAI 528 (1283)
Q Consensus 451 ~~i~~v~Q~~~l~~~-ti~~ni~~~~~~~~~~~~~~~~~~~~~~~-~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARal 528 (1283)
++++|++|++.+|++ |++||+.++..........+.......++ .++.+ |++....+....||||||||++|||||
T Consensus 81 ~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~laral 158 (226)
T cd03234 81 KCVAYVRQDDILLPGLTVRETLTYTAILRLPRKSSDAIRKKRVEDVLLRDL--ALTRIGGNLVKGISGGERRRVSIAVQL 158 (226)
T ss_pred ccEEEeCCCCccCcCCcHHHHHHHHHHhhcccccchHHHHHHHHHHHHHhh--cchhhhcccccCcCHHHHHHHHHHHHH
Confidence 899999999999987 99999987532110000001111111122 33333 555555667789999999999999999
Q ss_pred hcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCc-hhhh-ccCEEEEEeCCEEeEec
Q 000789 529 LKNPKILLLDEATSALDAESERIVQDALVKIM-TSRTTVVVAHRL-TTIR-NADLIAVVHQGKIVEKG 593 (1283)
Q Consensus 529 ~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l-~~~~-~~d~i~vl~~G~i~~~g 593 (1283)
+++|++|||||||++||+.+...+.+.+.++. +++|+|++||++ +.+. .||+|++|++|++++.|
T Consensus 159 ~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~G~i~~~g 226 (226)
T cd03234 159 LWDPKVLILDEPTSGLDSFTALNLVSTLSQLARRNRIVILTIHQPRSDLFRLFDRILLLSSGEIVYSG 226 (226)
T ss_pred HhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCCCHHHHHhCCEEEEEeCCEEEecC
Confidence 99999999999999999999999999999875 468999999998 4654 59999999999999875
No 491
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=1.2e-39 Score=380.73 Aligned_cols=212 Identities=31% Similarity=0.465 Sum_probs=179.6
Q ss_pred EEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCC----hHHHhcceE
Q 000789 1044 CVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFK----LSWLRQQMG 1119 (1283)
Q Consensus 1044 nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~----~~~lR~~i~ 1119 (1283)
|++++|++. . + |+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||.++...+ ...+|++++
T Consensus 4 ~l~~~~~~~---~-~-~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~i~~~~~~~~~~~~~~~i~ 78 (354)
T TIGR02142 4 RFSKRLGDF---S-L-DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRPDEGEIVLNGRTLFDSRKGIFLPPEKRRIG 78 (354)
T ss_pred EEEEEECCE---E-E-EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccCccccccchhhCCeE
Confidence 899999642 2 4 999999999999999999999999999999999999999999999986532 345788999
Q ss_pred EEccCCCCCh-hhHHHHHhcCCCCCCC----HHHHHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHHHHH
Q 000789 1120 LVSQEPVLFN-ETIRTNIAYGKQGGAT----EEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAV 1194 (1283)
Q Consensus 1120 ~V~Qdp~Lf~-gTIreNl~~g~~~~~s----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiARAl 1194 (1283)
||||++.+|. .|++||+.++.. ... ++++.+.++..++.++. .....+||||||||++|||||
T Consensus 79 ~v~q~~~l~~~~tv~enl~~~~~-~~~~~~~~~~~~~~l~~~gL~~~~-----------~~~~~~LSgGqkqRvalAraL 146 (354)
T TIGR02142 79 YVFQEARLFPHLSVRGNLRYGMK-RARPSERRISFERVIELLGIGHLL-----------GRLPGRLSGGEKQRVAIGRAL 146 (354)
T ss_pred EEecCCccCCCCcHHHHHHHHhh-ccChhHHHHHHHHHHHHcCChhHh-----------cCChhhCCHHHHHHHHHHHHH
Confidence 9999999996 499999987632 111 12355556655554443 334458999999999999999
Q ss_pred ccCCCEEEEecccCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHHHhccCch
Q 000789 1195 LKNPKILLLDEATSALDAESERVVQDALERVMV--NRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDALMKITDGA 1271 (1283)
Q Consensus 1195 l~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl~~~~g~ 1271 (1283)
+++|++|||||||++||+.+.+.+.+.|+++.+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++...+...
T Consensus 147 ~~~p~lllLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~~~ 226 (354)
T TIGR02142 147 LSSPRLLLMDEPLAALDDPRKYEILPYLERLHAEFGIPILYVSHSLQEVLRLADRVVVLEDGRVAAAGPIAEVWASPDLP 226 (354)
T ss_pred HcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEeCCEEEEECCHHHHhcCcCcc
Confidence 999999999999999999999999999998754 6899999999999876 9999999999999999999998765544
Q ss_pred h
Q 000789 1272 Y 1272 (1283)
Q Consensus 1272 y 1272 (1283)
|
T Consensus 227 ~ 227 (354)
T TIGR02142 227 W 227 (354)
T ss_pred c
Confidence 4
No 492
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=5.1e-40 Score=349.60 Aligned_cols=225 Identities=32% Similarity=0.536 Sum_probs=196.4
Q ss_pred cEEEEEEEEECCCCCC---------------------cccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcc
Q 000789 1039 AIELRCVSFKYPTRPD---------------------VQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSG 1097 (1283)
Q Consensus 1039 ~I~~~nVsf~Y~~~~~---------------------~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G 1097 (1283)
.|+++||+.-++.++. .--++|+||+|+.||+..|.|-||||||||+++|.|+++|++|
T Consensus 4 ~i~i~nv~kiFG~~~~~a~~~~~~G~~k~ei~~~tg~vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiept~G 83 (386)
T COG4175 4 KIEIKNVYKIFGKNPKRALKLLDQGKSKAEILKKTGLVVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPTRG 83 (386)
T ss_pred eEEeecceeecccCHHHHHHHHHcCCcHHHHHHhhCcEEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCCCCc
Confidence 4888888887765431 1246899999999999999999999999999999999999999
Q ss_pred eEEECCccCCCCChHHHh----cceEEEccCCCCC-hhhHHHHHhcCCC-CCC----CHHHHHHHHHHhChHHHHHhCCC
Q 000789 1098 HVLLDNIELPKFKLSWLR----QQMGLVSQEPVLF-NETIRTNIAYGKQ-GGA----TEEEIIAATEASNAHNFISALPH 1167 (1283)
Q Consensus 1098 ~I~idG~di~~~~~~~lR----~~i~~V~Qdp~Lf-~gTIreNl~~g~~-~~~----sd~ei~~al~~a~l~~~I~~lp~ 1167 (1283)
+|++||.|+..++.++|| +++++|+|..-|| ..||.||..||.. ... .++...++++.+|+.+|-.+.|+
T Consensus 84 ~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaLlPhrtVl~Nv~fGLev~Gv~~~er~~~a~~~l~~VgL~~~~~~yp~ 163 (386)
T COG4175 84 EILVDGKDIAKLSAAELRELRRKKISMVFQSFALLPHRTVLENVAFGLEVQGVPKAEREERALEALELVGLEGYADKYPN 163 (386)
T ss_pred eEEECCcchhcCCHHHHHHHHhhhhhhhhhhhccccchhHhhhhhcceeecCCCHHHHHHHHHHHHHHcCchhhhhcCcc
Confidence 999999999999987775 5799999999887 5699999999842 122 23456789999999999888875
Q ss_pred CcccccCCCCCCCChhHHHHHHHHHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHcC--CceEEEEecCchHHh-hc
Q 000789 1168 GYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMV--NRTTVVVAHRLTTIK-NA 1244 (1283)
Q Consensus 1168 Gldt~vge~G~~LSgGQrQRlaiARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHrl~ti~-~~ 1244 (1283)
+||||+|||+.|||||..+|+||++|||.|||||--...+|+-|.++-+ ++|+++|||+|+... --
T Consensus 164 -----------eLSGGMqQRVGLARAla~~~~IlLMDEaFSALDPLIR~~mQdeLl~Lq~~l~KTIvFitHDLdEAlriG 232 (386)
T COG4175 164 -----------ELSGGMQQRVGLARALANDPDILLMDEAFSALDPLIRTEMQDELLELQAKLKKTIVFITHDLDEALRIG 232 (386)
T ss_pred -----------cccchHHHHHHHHHHHccCCCEEEecCchhhcChHHHHHHHHHHHHHHHHhCCeEEEEecCHHHHHhcc
Confidence 7999999999999999999999999999999999999999999877643 689999999998764 59
Q ss_pred CEEEEEeCCEEEEecChHHHHhccCchhHH
Q 000789 1245 DIIAVVKNGVIAEQGSHDALMKITDGAYAS 1274 (1283)
Q Consensus 1245 D~I~vl~~G~Ive~Gt~~eLl~~~~g~y~~ 1274 (1283)
|||..|++|+|++.|||+|++.++..-|-+
T Consensus 233 ~rIaimkdG~ivQ~Gtp~eIl~~PAndYV~ 262 (386)
T COG4175 233 DRIAIMKDGEIVQVGTPEEILLNPANDYVR 262 (386)
T ss_pred ceEEEecCCeEEEeCCHHHHHcCccHHHHH
Confidence 999999999999999999999877666643
No 493
>PRK00349 uvrA excinuclease ABC subunit A; Reviewed
Probab=100.00 E-value=6.4e-39 Score=406.02 Aligned_cols=104 Identities=32% Similarity=0.518 Sum_probs=93.7
Q ss_pred Cccc-ccCCCCCCCChhHHHHHHHHHHHccCC---CEEEEecccCCCCHHHHHHHHHHHHHHc-CCceEEEEecCchHHh
Q 000789 1168 GYET-NVGERGVQLSGGQKQRIAIARAVLKNP---KILLLDEATSALDAESERVVQDALERVM-VNRTTVVVAHRLTTIK 1242 (1283)
Q Consensus 1168 Gldt-~vge~G~~LSgGQrQRlaiARAll~~p---~ILiLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHrl~ti~ 1242 (1283)
|++. .++.....||||||||++|||+|+++| +++||||||++||+++...+.+.|+++. ++.|+|+|+|+++.+.
T Consensus 818 gL~~l~l~~~~~tLSgGEkQRl~LAraL~~~p~~~~llILDEPtsGLD~~~~~~L~~~L~~l~~~G~TVIiitH~~~~i~ 897 (943)
T PRK00349 818 GLGYIKLGQPATTLSGGEAQRVKLAKELSKRSTGKTLYILDEPTTGLHFEDIRKLLEVLHRLVDKGNTVVVIEHNLDVIK 897 (943)
T ss_pred CCCcccccCCcccCCHHHHHHHHHHHHHhcCCCCCeEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHH
Confidence 5544 357777899999999999999999999 9999999999999999999999999875 5789999999999999
Q ss_pred hcCEEEEE------eCCEEEEecChHHHHhccCch
Q 000789 1243 NADIIAVV------KNGVIAEQGSHDALMKITDGA 1271 (1283)
Q Consensus 1243 ~~D~I~vl------~~G~Ive~Gt~~eLl~~~~g~ 1271 (1283)
.||+|++| ++|+|++.|+++++.+.+.+.
T Consensus 898 ~aD~ii~Lgp~~G~~~G~Iv~~Gt~~el~~~~~s~ 932 (943)
T PRK00349 898 TADWIIDLGPEGGDGGGEIVATGTPEEVAKVEASY 932 (943)
T ss_pred hCCEEEEecCCcCCCCCEEEEeCCHHHHHhCcccH
Confidence 99999999 799999999999999865443
No 494
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.8e-40 Score=327.77 Aligned_cols=214 Identities=30% Similarity=0.536 Sum_probs=184.7
Q ss_pred EEEEEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCCCCcceEEECCccCCCCChHHHhcceE
Q 000789 1040 IELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMG 1119 (1283)
Q Consensus 1040 I~~~nVsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~~~~G~I~idG~di~~~~~~~lR~~i~ 1119 (1283)
|++.+++.+|++ ...+++||||+++.||.+||.|+|||||||+++.|..|+.|++|+|+|||.|+.+ ++...|++||
T Consensus 2 l~v~~l~K~y~~--~v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~~G~v~idg~d~~~-~p~~vrr~IG 78 (245)
T COG4555 2 LEVTDLTKSYGS--KVQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPDSGKVTIDGVDTVR-DPSFVRRKIG 78 (245)
T ss_pred eeeeehhhhccC--HHhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCCCceEEEeeccccc-ChHHHhhhcc
Confidence 688999999985 3458999999999999999999999999999999999999999999999999977 4567899999
Q ss_pred EEccCCCCC-hhhHHHHHhcC-CCCCCCHHH----HHHHHHHhChHHHHHhCCCCcccccCCCCCCCChhHHHHHHHHHH
Q 000789 1120 LVSQEPVLF-NETIRTNIAYG-KQGGATEEE----IIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARA 1193 (1283)
Q Consensus 1120 ~V~Qdp~Lf-~gTIreNl~~g-~~~~~sd~e----i~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQRlaiARA 1193 (1283)
+++-+.-|+ ..|.||||.|. ...+.++.+ +.+.-+.-++.++ +|+.+| +||-|+|||++||||
T Consensus 79 Vl~~e~glY~RlT~rEnl~~Fa~L~~l~~~~~kari~~l~k~l~l~~~-------~~rRv~----~~S~G~kqkV~iARA 147 (245)
T COG4555 79 VLFGERGLYARLTARENLKYFARLNGLSRKEIKARIAELSKRLQLLEY-------LDRRVG----EFSTGMKQKVAIARA 147 (245)
T ss_pred eecCCcChhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhChHHH-------HHHHHh----hhchhhHHHHHHHHH
Confidence 999777776 56999999853 222344443 3334444444444 455555 699999999999999
Q ss_pred HccCCCEEEEecccCCCCHHHHHHHHHHHHHHcC-CceEEEEecCchHHhh-cCEEEEEeCCEEEEecChHHHHhc
Q 000789 1194 VLKNPKILLLDEATSALDAESERVVQDALERVMV-NRTTVVVAHRLTTIKN-ADIIAVVKNGVIAEQGSHDALMKI 1267 (1283)
Q Consensus 1194 ll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~~-~~TvI~IaHrl~ti~~-~D~I~vl~~G~Ive~Gt~~eLl~~ 1267 (1283)
|+++|+|++||||||+||.-+.+.+++-+.+... +++||+-||-++.++. ||+|+++.+|+++..|+++++.++
T Consensus 148 lvh~P~i~vlDEP~sGLDi~~~r~~~dfi~q~k~egr~viFSSH~m~EvealCDrvivlh~Gevv~~gs~~~l~~r 223 (245)
T COG4555 148 LVHDPSILVLDEPTSGLDIRTRRKFHDFIKQLKNEGRAVIFSSHIMQEVEALCDRVIVLHKGEVVLEGSIEALDAR 223 (245)
T ss_pred HhcCCCeEEEcCCCCCccHHHHHHHHHHHHHhhcCCcEEEEecccHHHHHHhhheEEEEecCcEEEcCCHHHHHHH
Confidence 9999999999999999999999999999998864 8999999999999995 999999999999999999999875
No 495
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=1.8e-39 Score=365.76 Aligned_cols=220 Identities=29% Similarity=0.421 Sum_probs=181.7
Q ss_pred cEEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCC---CceEEECCcccCCC-----C
Q 000789 374 EIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPD---AGEVLIDGIDIKKL-----Q 445 (1283)
Q Consensus 374 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~---~G~i~~~g~~~~~~-----~ 445 (1283)
-|+++||+++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|+ +|+|.++|.++... +
T Consensus 4 ~l~~~nl~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~ 80 (262)
T PRK09984 4 IIRVEKLAKTFNQ---HQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARD 80 (262)
T ss_pred EEEEeeEEEEeCC---eEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchh
Confidence 4899999999963 46999999999999999999999999999999999999986 49999999988653 2
Q ss_pred HHHHhcccEEEccCCCCCcc-cHHHHHhcCCCCCCH---H--HHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHH
Q 000789 446 LKWIREKIGLVSQEPILFAT-SLRENIAYGKENATD---Q--EIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQK 519 (1283)
Q Consensus 446 ~~~~r~~i~~v~Q~~~l~~~-ti~~ni~~~~~~~~~---~--~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqk 519 (1283)
...++++++|+||++.+|.. |++||+.++...... . ..........+.+.++.+ |++........+||||||
T Consensus 81 ~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~ 158 (262)
T PRK09984 81 IRKSRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRV--GMVHFAHQRVSTLSGGQQ 158 (262)
T ss_pred HHHHHhheEEEccccccccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHc--CCHHHHhCCccccCHHHH
Confidence 34567889999999998874 999999876421100 0 000000111233455555 555556667789999999
Q ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChh
Q 000789 520 QRIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMT--SRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHD 596 (1283)
Q Consensus 520 qriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~ 596 (1283)
||++|||||+.+|++|||||||++||+++.+.+.+.|+++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+++
T Consensus 159 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~~~~~~~d~i~~l~~g~i~~~g~~~ 238 (262)
T PRK09984 159 QRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVDYALRYCERIVALRQGHVFYDGSSQ 238 (262)
T ss_pred HHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999998853 6899999999998755 9999999999999999999
Q ss_pred HH
Q 000789 597 EL 598 (1283)
Q Consensus 597 ~l 598 (1283)
++
T Consensus 239 ~~ 240 (262)
T PRK09984 239 QF 240 (262)
T ss_pred Hh
Confidence 86
No 496
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=6.9e-40 Score=375.73 Aligned_cols=204 Identities=25% Similarity=0.478 Sum_probs=174.6
Q ss_pred CcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHHhcccEEEccCCCCCcc-cHH
Q 000789 390 VQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWIREKIGLVSQEPILFAT-SLR 468 (1283)
Q Consensus 390 ~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~-ti~ 468 (1283)
.++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.. ....+|+++||+||++.+|.. |++
T Consensus 6 ~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~-~~~~~~~~i~~~~q~~~~~~~~tv~ 84 (302)
T TIGR01188 6 FKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPTSGTARVAGYDVVR-EPRKVRRSIGIVPQYASVDEDLTGR 84 (302)
T ss_pred eeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-CHHHHHhhcEEecCCCCCCCCCcHH
Confidence 469999999999999999999999999999999999999999999999999875 345668899999999999876 999
Q ss_pred HHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCH
Q 000789 469 ENIAYGKE--NATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARAILKNPKILLLDEATSALDA 546 (1283)
Q Consensus 469 ~ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARal~~~~~illlDE~ts~lD~ 546 (1283)
||+.+... ..+..+..+ .+++.++.+ |++........+||||||||++|||||+++|++|||||||++||+
T Consensus 85 e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~ 157 (302)
T TIGR01188 85 ENLEMMGRLYGLPKDEAEE-----RAEELLELF--ELGEAADRPVGTYSGGMRRRLDIAASLIHQPDVLFLDEPTTGLDP 157 (302)
T ss_pred HHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CChhHhCCchhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCH
Confidence 99987421 112222111 223455555 565556667789999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHc-CCCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHHhcC
Q 000789 547 ESERIVQDALVKIM-TSRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDELIKD 601 (1283)
Q Consensus 547 ~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~ 601 (1283)
.+.+.+.+.|+++. +++|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 158 ~~~~~l~~~l~~~~~~g~tvi~~sH~~~~~~~~~d~v~~l~~G~i~~~g~~~~l~~~ 214 (302)
T TIGR01188 158 RTRRAIWDYIRALKEEGVTILLTTHYMEEADKLCDRIAIIDHGRIIAEGTPEELKRR 214 (302)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHHh
Confidence 99999999999885 46899999999999976 999999999999999999998754
No 497
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=7.4e-40 Score=360.75 Aligned_cols=211 Identities=25% Similarity=0.413 Sum_probs=169.9
Q ss_pred EEEEEEEEECCCCC-CcccccceeEEecCCCEEEEEcCCCCCHHHHHHHHhccCC---CCcceEEECCccCCCCChHHHh
Q 000789 1040 IELRCVSFKYPTRP-DVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYD---PDSGHVLLDNIELPKFKLSWLR 1115 (1283)
Q Consensus 1040 I~~~nVsf~Y~~~~-~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~---~~~G~I~idG~di~~~~~~~lR 1115 (1283)
+.|+||+|+|+... ..++|+|+||+|++||+++|+||||||||||+++|.|+++ |++|+|.+||.++. ...+|
T Consensus 4 ~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~~---~~~~~ 80 (226)
T cd03234 4 LPWWDVGLKAKNWNKYARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPRK---PDQFQ 80 (226)
T ss_pred ceeecceeeeecCccccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEECC---hHHhc
Confidence 67999999998542 2579999999999999999999999999999999999999 99999999999875 34678
Q ss_pred cceEEEccCCCCChh-hHHHHHhcCCC---CCCCHHHHHHHHHHhChHH-HHHhCCCCcccccCCCCCCCChhHHHHHHH
Q 000789 1116 QQMGLVSQEPVLFNE-TIRTNIAYGKQ---GGATEEEIIAATEASNAHN-FISALPHGYETNVGERGVQLSGGQKQRIAI 1190 (1283)
Q Consensus 1116 ~~i~~V~Qdp~Lf~g-TIreNl~~g~~---~~~sd~ei~~al~~a~l~~-~I~~lp~Gldt~vge~G~~LSgGQrQRlai 1190 (1283)
++++|+||++.+|.+ |++||+.++.. .....++... ...++ .+..+ +++.........||||||||++|
T Consensus 81 ~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~----~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~l 154 (226)
T cd03234 81 KCVAYVRQDDILLPGLTVRETLTYTAILRLPRKSSDAIRK----KRVEDVLLRDL--ALTRIGGNLVKGISGGERRRVSI 154 (226)
T ss_pred ccEEEeCCCCccCcCCcHHHHHHHHHHhhcccccchHHHH----HHHHHHHHHhh--cchhhhcccccCcCHHHHHHHHH
Confidence 899999999999986 99999986411 0111111110 00111 22221 23222334556899999999999
Q ss_pred HHHHccCCCEEEEecccCCCCHHHHHHHHHHHHHHc-CCceEEEEecCc-hHH-hhcCEEEEEeCCEEEEec
Q 000789 1191 ARAVLKNPKILLLDEATSALDAESERVVQDALERVM-VNRTTVVVAHRL-TTI-KNADIIAVVKNGVIAEQG 1259 (1283)
Q Consensus 1191 ARAll~~p~ILiLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHrl-~ti-~~~D~I~vl~~G~Ive~G 1259 (1283)
|||++++|++|||||||++||+.+...+.+.|++.. +++|+|++||++ +.+ ..||+|++|++|++++.|
T Consensus 155 aral~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~G~i~~~g 226 (226)
T cd03234 155 AVQLLWDPKVLILDEPTSGLDSFTALNLVSTLSQLARRNRIVILTIHQPRSDLFRLFDRILLLSSGEIVYSG 226 (226)
T ss_pred HHHHHhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCCCHHHHHhCCEEEEEeCCEEEecC
Confidence 999999999999999999999999999999999875 478999999998 455 559999999999999876
No 498
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=1.3e-39 Score=363.52 Aligned_cols=215 Identities=25% Similarity=0.364 Sum_probs=177.4
Q ss_pred EEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCC--CCCCceEEECCcccCCCCHHHH-hc
Q 000789 375 IELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFY--DPDAGEVLIDGIDIKKLQLKWI-RE 451 (1283)
Q Consensus 375 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~--~~~~G~i~~~g~~~~~~~~~~~-r~ 451 (1283)
|+++||+++|++ .++|+|+||+|++||+++|+||||||||||+++|+|++ +|++|+|.++|+++...+.... +.
T Consensus 1 l~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 77 (243)
T TIGR01978 1 LKIKDLHVSVED---KEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLLELEPDERARA 77 (243)
T ss_pred CeEeeEEEEECC---EEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecCCCCHHHhhcc
Confidence 478999999963 36999999999999999999999999999999999994 7999999999999988776554 45
Q ss_pred ccEEEccCCCCCcc-cHHHHHhcCCCC---------CCHHHHHHHHHHhcHHHHHHhCCCCccc-cccCCCC-CCChHHH
Q 000789 452 KIGLVSQEPILFAT-SLRENIAYGKEN---------ATDQEIRTAIELANAAKFIDKLPKGLDT-MAGEHGT-QLSGGQK 519 (1283)
Q Consensus 452 ~i~~v~Q~~~l~~~-ti~~ni~~~~~~---------~~~~~~~~~~~~~~~~~~i~~lp~g~~t-~~~~~g~-~LSgGqk 519 (1283)
.++||+|++.+|++ |++||+.+.... .+.++.. ..+.+.++.+ |++. ....... .||||||
T Consensus 78 ~i~~v~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~~~LS~G~~ 150 (243)
T TIGR01978 78 GLFLAFQYPEEIPGVSNLEFLRSALNARRSARGEEPLDLLDFL-----KLLKAKLALL--GMDEEFLNRSVNEGFSGGEK 150 (243)
T ss_pred ceEeeeccccccCCcCHHHHHHHHHHHhhcccccccccHHHHH-----HHHHHHHHHc--CCchhhcccccccCcCHHHH
Confidence 69999999999876 899999764211 0111111 1223444444 5543 2344444 5999999
Q ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC-CCeEEEEecCchhhhc--cCEEEEEeCCEEeEecChh
Q 000789 520 QRIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMT-SRTTVVVAHRLTTIRN--ADLIAVVHQGKIVEKGTHD 596 (1283)
Q Consensus 520 qriaiARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~-~~t~i~itH~l~~~~~--~d~i~vl~~G~i~~~g~~~ 596 (1283)
||++|||||+.+|++|||||||++||+.+.+.+.+.|+++.+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++
T Consensus 151 qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~~~~~~~~d~i~~l~~G~i~~~g~~~ 230 (243)
T TIGR01978 151 KRNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQRLLNYIKPDYVHVLLDGRIVKSGDVE 230 (243)
T ss_pred HHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHHHHHhhcCCeEEEEeCCEEEEecCHH
Confidence 999999999999999999999999999999999999998864 6899999999999975 7999999999999999987
Q ss_pred HHh
Q 000789 597 ELI 599 (1283)
Q Consensus 597 ~l~ 599 (1283)
++.
T Consensus 231 ~~~ 233 (243)
T TIGR01978 231 LAK 233 (243)
T ss_pred Hhc
Confidence 653
No 499
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=1.6e-39 Score=379.76 Aligned_cols=216 Identities=31% Similarity=0.528 Sum_probs=182.8
Q ss_pred EEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCC----HHHHhcccE
Q 000789 379 DVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQ----LKWIREKIG 454 (1283)
Q Consensus 379 ~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~----~~~~r~~i~ 454 (1283)
|++++|++ .. + |+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+ ....+++++
T Consensus 4 ~l~~~~~~---~~-~-~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~i~~~~~~~~~~~~~~~i~ 78 (354)
T TIGR02142 4 RFSKRLGD---FS-L-DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRPDEGEIVLNGRTLFDSRKGIFLPPEKRRIG 78 (354)
T ss_pred EEEEEECC---EE-E-EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccCccccccchhhCCeE
Confidence 78999963 23 5 999999999999999999999999999999999999999999999986532 235678899
Q ss_pred EEccCCCCCcc-cHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHhcCCC
Q 000789 455 LVSQEPILFAT-SLRENIAYGKENATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARAILKNPK 533 (1283)
Q Consensus 455 ~v~Q~~~l~~~-ti~~ni~~~~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARal~~~~~ 533 (1283)
||+|++.+|+. |++||+.++.......+. ...+.+.++.+ |++......+.+||||||||++|||||+.+|+
T Consensus 79 ~v~q~~~l~~~~tv~enl~~~~~~~~~~~~-----~~~~~~~l~~~--gL~~~~~~~~~~LSgGqkqRvalAraL~~~p~ 151 (354)
T TIGR02142 79 YVFQEARLFPHLSVRGNLRYGMKRARPSER-----RISFERVIELL--GIGHLLGRLPGRLSGGEKQRVAIGRALLSSPR 151 (354)
T ss_pred EEecCCccCCCCcHHHHHHHHhhccChhHH-----HHHHHHHHHHc--CChhHhcCChhhCCHHHHHHHHHHHHHHcCCC
Confidence 99999999975 999999987543222111 11233455555 77777777888999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhc-cCEEEEEeCCEEeEecChhHHhcCCCChh
Q 000789 534 ILLLDEATSALDAESERIVQDALVKIMT--SRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGTHDELIKDPEGPY 606 (1283)
Q Consensus 534 illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~~~~~~ 606 (1283)
+|||||||++||+.+.+.+.+.|+++.+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++...+...|
T Consensus 152 lllLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~~~~ 227 (354)
T TIGR02142 152 LLLMDEPLAALDDPRKYEILPYLERLHAEFGIPILYVSHSLQEVLRLADRVVVLEDGRVAAAGPIAEVWASPDLPW 227 (354)
T ss_pred EEEEcCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEeCCEEEEECCHHHHhcCcCccc
Confidence 9999999999999999999999998754 6899999999999875 99999999999999999999987654333
No 500
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=1.8e-39 Score=354.31 Aligned_cols=202 Identities=33% Similarity=0.514 Sum_probs=171.3
Q ss_pred EEEEEEEEECCCCCCCcccccceEEEeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCceEEECCcccCCCCHHHHhcccE
Q 000789 375 IELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWIREKIG 454 (1283)
Q Consensus 375 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 454 (1283)
++++||+++|+. .++|+||++++|++++|+||||||||||+++|+|+++|++|+|.+||+++...+ .+++.++
T Consensus 1 ~~~~~l~~~~~~-----~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~--~~~~~i~ 73 (213)
T TIGR01277 1 LALDKVRYEYEH-----LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEPASGSIKVNDQSHTGLA--PYQRPVS 73 (213)
T ss_pred CeEEeeeEEeCC-----cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEcccCC--hhccceE
Confidence 368999999952 468999999999999999999999999999999999999999999999987543 3577899
Q ss_pred EEccCCCCCcc-cHHHHHhcCC-CCC-----CHHHHHHHHHHhcHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHH
Q 000789 455 LVSQEPILFAT-SLRENIAYGK-ENA-----TDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARA 527 (1283)
Q Consensus 455 ~v~Q~~~l~~~-ti~~ni~~~~-~~~-----~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqriaiARa 527 (1283)
||+|++.+|.. |++||+.++. +.. .++++.++++..++.+. ......+||||||||++||||
T Consensus 74 ~v~q~~~~~~~~t~~en~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrl~lara 142 (213)
T TIGR01277 74 MLFQENNLFAHLTVRQNIGLGLHPGLKLNAEQQEKVVDAAQQVGIADY-----------LDRLPEQLSGGQRQRVALARC 142 (213)
T ss_pred EEeccCccCCCCcHHHHHHhHhhccCCccHHHHHHHHHHHHHcCcHHH-----------hhCCcccCCHHHHHHHHHHHH
Confidence 99999999875 9999998642 111 12234444444444443 444456899999999999999
Q ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhc-cCEEEEEeCCEEeEecC
Q 000789 528 ILKNPKILLLDEATSALDAESERIVQDALVKIMT--SRTTVVVAHRLTTIRN-ADLIAVVHQGKIVEKGT 594 (1283)
Q Consensus 528 l~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~ 594 (1283)
++.+|+++||||||++||+++.+.+.+.|.++.+ ++|+|+|||+++.+.. ||++++|++|++++.|.
T Consensus 143 l~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~tii~vsh~~~~~~~~~d~v~~l~~g~i~~~~~ 212 (213)
T TIGR01277 143 LVRPNPILLLDEPFSALDPLLREEMLALVKQLCSERQRTLLMVTHHLSDARAIASQIAVVSQGKIKVVSD 212 (213)
T ss_pred HhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCeEEEEECCeEEEecC
Confidence 9999999999999999999999999999998753 6899999999999865 99999999999999874
Done!