Query 000789
Match_columns 1283
No_of_seqs 373 out of 4819
Neff 8.3
Searched_HMMs 29240
Date Tue Mar 26 17:21:05 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/000789.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_558-562//hhsearch_pdb/000789hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4f4c_A Multidrug resistance pr 1.0 1 1 1775.6 128.5 1237 31-1282 55-1319(1321)
2 3g5u_A MCG1178, multidrug resi 1.0 1 1 1546.9 116.4 1223 34-1282 31-1273(1284)
3 4f4c_A Multidrug resistance pr 1.0 1 1 855.4 71.8 577 701-1281 59-655 (1321)
4 3g5u_A MCG1178, multidrug resi 1.0 1 1 781.3 58.5 574 703-1280 34-626 (1284)
5 3qf4_B Uncharacterized ABC tra 1.0 1 1 737.4 65.7 570 702-1281 23-592 (598)
6 3qf4_A ABC transporter, ATP-bi 1.0 1 1 737.3 70.7 567 707-1281 14-580 (587)
7 4a82_A Cystic fibrosis transme 1.0 1 1 732.1 64.8 570 705-1280 3-577 (578)
8 3b5x_A Lipid A export ATP-bind 1.0 1 1 719.1 76.7 569 703-1281 12-581 (582)
9 3qf4_B Uncharacterized ABC tra 1.0 1 1 719.0 65.6 573 33-615 20-592 (598)
10 2yl4_A ATP-binding cassette SU 1.0 1 1 718.6 72.7 574 705-1281 8-585 (595)
No 1
>4f4c_A Multidrug resistance protein PGP-1; ABC transporter, ATPase, multi-drug transporter, exporter, A binding, hydrolase,protein transport; HET: NDG NAG BMA MAN 0SA; 3.40A {Caenorhabditis elegans}
Probab=1.00 E-value=1 Score=1775.57 Aligned_cols=1237 Identities=37% Similarity=0.628 Sum_probs=1060.6
Q ss_pred CCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC------------------CCHHHHHH
Q ss_conf 888641499998843225589999999999998978999999999999862389------------------84132889
Q 000789 31 NDNQKVPFYKLFAFADKQDAVLMIVGTISAIGSGLAHPFMTLIFGHLINSFGSS------------------DRSHVVHE 92 (1283)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~id~~~~~------------------~~~~~~~~ 92 (1283)
+..++.+++++|+|+.++++.+++++++++++.++..|++++++|+++|.+... ....+.+.
T Consensus 55 ~~~~~v~~~~Lfrya~~~d~~l~~~g~~~a~~~G~~~p~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (1321)
T 4f4c_A 55 EVVNKVSIPQLYRYTTTLEKLLLFIGTLVAVITGAGLPLMSILQGKVSQAFINEQIVINNNGSTFLPTGQNYTKTDFEHD 134 (1321)
T ss_dssp CCSSCCCHHHHTTTCCHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHTTSCBCSSTTCBCCHHHHHHH
T ss_pred CCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHH
T ss_conf 25687799997315676789999999999999999999999999999999970100014543000344310016899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999999999999980994347026882079999996899999999899
Q 000789 93 VSKVAVKFLYLAAGTGIAAFLQVSCWMVTGERQATRIRGLYLKTILRQDIGFFDTETTTGEVIGRMSGDTILIQEAMGEK 172 (1283)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~~~~~l~~~~~~~~~~~~~~g~l~~r~~~D~~~i~~~~~~~ 172 (1283)
+...++++++++++.+++.+++.++|.+.++|+..++|..+|++++++|++|||++ ++|++++|+++|++.+++++...
T Consensus 135 ~~~~~~~~~~l~i~~~~~~~~~~~~~~~~~~r~~~~lR~~~~~~ll~~~~~~fd~~-~~G~l~sr~~~D~~~i~~~~~~~ 213 (1321)
T 4f4c_A 135 VMNVVWSYAAMTVGMWAAGQITVTCYLYVAEQMNNRLRREFVKSILRQEISWFDTN-HSGTLATKLFDNLERVKEGTGDK 213 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHT-CCTTHHHHHHHHHHHHHHTSSHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCC-CHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999978898998799-84899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 99999999999999999988859999999999999999999999999999999999999999999999813999998460
Q 000789 173 VGKFIQLMSTFFGGFVVALARGWFLALVLLACLPAIVIAGGSMALIMSKMSSRGQIAYSEAGTVVEQTVSGIRTVSSFTG 252 (1283)
Q Consensus 173 ~~~~~~~~~~~i~~~i~~~~~~~~l~l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~ 252 (1283)
++.++..+..++++++++++++|.+++++++.+|+++++..++.+++.+..++.++..+++++.+.|.++|+++||+|++
T Consensus 214 l~~~~~~~~~~i~~~i~~~~~~~~l~lv~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~ 293 (1321)
T 4f4c_A 214 IGMAFQYLSQFITGFIVAFTHSWQLTLVMLAVTPIQALCGFAIAKSMSTFAIRETLRYAKAGKVVEETISSIRTVVSLNG 293 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99999999999999999999989999999999999999999999999999999999999999999999983999998214
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 89999999999999999999999999999999999999999999999999987147468889999999999999999889
Q 000789 253 EKQAIEKYNNKLQVAYRAAVQQGMVSGIGLGVLMLTVIGTYGLAVWYGSKLIIEKGYNGGTVINVIMAIMTGGMSLGQTS 332 (1283)
Q Consensus 253 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~ 332 (1283)
|+.+.++|.+..++..+...+.....++..+...++..+.+++++|+|.+++..|.+++|.+++++.++.....|+..+.
T Consensus 294 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~~~ 373 (1321)
T 4f4c_A 294 LRYELERYSTAVEEAKKAGVLKGLFLGISFGAMQASNFISFALAFYIGVGWVHDGSLNFGDMLTTFSSVMMGSMALGLAG 373 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 29999999999999999999999999999999999999999999999999999599869999999999999999999899
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCEEEEECCCEEEEECCC
Q ss_conf 99999999999999999987139988999988875567556099997999989999986531211888089899998699
Q 000789 333 PCLNAFAGGQAAAYKMFETIKRKPKIDPYDTSGITLEKIEGEIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQS 412 (1283)
Q Consensus 333 ~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~s 412 (1283)
+.+..++++.++++|++++++.+++.+........+.+..+.|+|+||+|+||++++.++|+|+||++++|++++|||||
T Consensus 374 ~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~~~g~I~~~nvsF~Y~~~~~~~vL~~isl~i~~G~~vaivG~s 453 (1321)
T 4f4c_A 374 PQLAVLGTAQGAASGIYEVLDRKPVIDSSSKAGRKDMKIKGDITVENVHFTYPSRPDVPILRGMNLRVNAGQTVALVGSS 453 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTSCCSSCSSSCCCCCCCCCCCEEEEEEEECCSSSTTSCSEEEEEEEECTTCEEEEEECS
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEECEEEEECCCCEEEEEECC
T ss_conf 99999999999999999997178534566655656778887679998554079999874333318862288278998058
Q ss_pred CCCHHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHCCCEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCH
Q ss_conf 98399999899729999986699999606998988874451888268878801089998439999999999999999329
Q 000789 413 GSGKSTVISLVERFYDPDAGEVLIDGIDIKKLQLKWIREKIGLVSQEPILFATSLRENIAYGKENATDQEIRTAIELANA 492 (1283)
Q Consensus 413 GsGKSTl~~~l~g~~~~~~G~i~i~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~ 492 (1283)
|||||||+++|+|+|+|++|+|.+||+|+++++.+++|++|+||+|+||+|++||+|||.+|+++++++++.+||+.+++
T Consensus 454 GsGKSTll~ll~~~~~~~~G~I~idG~~i~~~~~~~lr~~i~~v~Q~~~Lf~~TI~eNI~~g~~~~~~~~v~~a~~~a~l 533 (1321)
T 4f4c_A 454 GCGKSTIISLLLRYYDVLKGKITIDGVDVRDINLEFLRKNVAVVSQEPALFNCTIEENISLGKEGITREEMVAACKMANA 533 (1321)
T ss_dssp SSCHHHHHHHHTTSSCCSEEEEEETTEETTTSCHHHHHHHEEEECSSCCCCSEEHHHHHHTTCTTCCHHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCHHHHHHCCCCCCCCCEEECCCHHHHHHHHCCCCHHHHHHHHHHHCCC
T ss_conf 98577888875456516448615799650112599985046665875332078616788641552209999999987565
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCC
Q ss_conf 99998488986530038999899578999989988701998889827877899998999999999870898399980482
Q 000789 493 AKFIDKLPKGLDTMAGEHGTQLSGGQKQRIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMTSRTTVVVAHRL 572 (1283)
Q Consensus 493 ~~~i~~l~~g~~t~~~~~g~~LSgGqkqrialARal~~~~~illLDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~ 572 (1283)
++|++.||+||+|.+||+|.+||||||||||||||+|++|+|||||||||+||+++++.+++++.++.++||+|+||||+
T Consensus 534 ~~~i~~lp~G~~T~vGe~G~~LSGGQkQRiaiARAl~~~~~IliLDE~tSaLD~~te~~i~~~l~~~~~~~T~iiiaHrl 613 (1321)
T 4f4c_A 534 EKFIKTLPNGYNTLVGDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESEGIVQQALDKAAKGRTTIIIAHRL 613 (1321)
T ss_dssp HHHHHHSTTTTSSEESSSSCCCCHHHHHHHHHHHHHTTCCSEEEEESTTTTSCTTTHHHHHHHHHHHHTTSEEEEECSCT
T ss_pred HHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCH
T ss_conf 46887088888607558988777778799999998725999899845544688789999999999984798899973638
Q ss_pred HHHHCCCEEEEEECCEEEEECCHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHH--HHHHHHCCCCCCCCC
Q ss_conf 134206889999598896733946773099970388999751370234432002234674122--234421179998863
Q 000789 573 TTIRNADLIAVVHQGKIVEKGTHDELIKDPEGPYTQLVRLQEGSKEAEDALATDADKLDSSFD--ILDKAMTRSGSRGES 650 (1283)
Q Consensus 573 ~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 650 (1283)
++++.||+|++|++|+|+|+|+|+||+++ +|.|++++..|...+..+...+......+.... ...+...+..+..
T Consensus 614 s~i~~aD~Iivl~~G~ive~Gth~eL~~~-~g~y~~l~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 690 (1321)
T 4f4c_A 614 STIRNADLIISCKNGQVVEVGDHRALMAQ-QGLYYDLVTAQTFTDAVDSAAEGKFSRENSVARQTSEHEGLSRQASEM-- 690 (1321)
T ss_dssp TTTTTCSEEEEEETTEEEEEECHHHHHTT-TCHHHHHHHHHHHHHHHHHHHCC---------------------------
T ss_pred HHHHHCCEEEEEECCEEECCCCHHHHHHH-HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--
T ss_conf 78986898999639965136899999985-327999999622122223323344332232111222223422222221--
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH-----HHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
Q ss_conf 221123468898776554458899987555644788988875246-----866666899999885069157999999999
Q 000789 651 MRRSISRHSSGSRHSFGFTYGVPGPINVFETEEGDQGGAERTPLM-----IEKRQKLSMRRLAYLNKPEFPVLLIGSIAA 725 (1283)
Q Consensus 651 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 725 (1283)
.....+... ... . .........+. +. ..+....... .....+..++++.++.++.++.++++.++.
T Consensus 691 -~~~~~~~~~----~~~-~-~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 761 (1321)
T 4f4c_A 691 -DDIMNRVRS----STI-G-SITNGPVIDEK-EE-RIGKDALSRLKQELEENNAQKTNLFEILYHARPHALSLFIGMSTA 761 (1321)
T ss_dssp ---------------------------------C-CCCCCHHHHHHHTTTTSCCCCCCHHHHHHHTGGGHHHHHHHHHHH
T ss_pred -CCHHHHHHC----CCC-C-CCCCCCCHHHH-HH-HCCCHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHH
T ss_conf -102211101----321-2-45677402577-75-315403899999999707863109999999877899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 99999999999999999997439722333206999999999999999999999999999999999999999999997089
Q 000789 726 GIHGVIFPIFGLLLSSSIRMFFEPEDKLRKDSRFWALIYLVLGIINLIAVPFQNYFFGVAGGKLIRRIRSLTFEKVVHQE 805 (1283)
Q Consensus 726 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~lr~~l~~~il~~~ 805 (1283)
.+.+.+.|.+.+.+...+..+...+........+|.+++++++++..++.++..+++...+.++..++|..+|++++++|
T Consensus 762 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~lr~~l~~~il~~~ 841 (1321)
T 4f4c_A 762 TIGGFIYPTYSVFFTSFMNVFAGNPADFLSQGHFWALMFLVLAAAQGICSFLMTFFMGIASESLTRDLRNKLFRNVLSQH 841 (1321)
T ss_dssp HHGGGHHHHHHHHHHHHHHHTSSCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 99999999999999999987517934556678999999999999999999999999999999999999999988873499
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 53323577782479999963099999999998999999999999999999998599999999999999999999999973
Q 000789 806 ISWFDDPANSSGSVGARLSTDASTIRSLVGDSLALVVQNIATIAAGLIIAFTANWILAFVILAVSPLMLVQGYTQTKFMK 885 (1283)
Q Consensus 806 ~~~f~~~~~~~g~i~~r~~~d~~~i~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~i~l~~~~~~~~~~~~~~~~~~ 885 (1283)
++|||..++++|++++|+++|++.++..+...+..++..++.+++.++++++.+|.+++++++++|++++..+...+...
T Consensus 842 ~~ffd~~~~~~G~i~~r~s~D~~~i~~~l~~~l~~~~~~~~~~i~~~~~~~~~~~~l~lv~l~~~~~~~~~~~~~~~~~~ 921 (1321)
T 4f4c_A 842 IGFFDSPQNASGKISTRLATDVPNLRTAIDFRFSTVITTLVSMVAGIGLAFFYGWQMALLIIAILPIVAFGQYLRGRRFT 921 (1321)
T ss_dssp SSSTTSGGGCHHHHHHHHHTHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTSCCS
T ss_pred CHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 33321678884888850250599999999999999999865377770221378689999999988899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 89999999999999999998822599997064799999999997207886799999997999999999999999999999
Q 000789 886 GFSADAKLMYEEASQVANDAVGSIRTVASFCSEEKVMDLYEKKCEGPLKNGVRRGILSGAGFGFSFLVLYCTNAFCFYIG 965 (1283)
Q Consensus 886 ~~~~~~~~~~~~~~~~~~e~l~g~~tI~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 965 (1283)
....+..+...+....+.|++.|+++||+|+.++.+.++|.+..+...+...+.........++...+..+..++++++|
T Consensus 922 ~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 1001 (1321)
T 4f4c_A 922 GKNVKSASEFADSGKIAIEAIENVRTVQALAREDTFYENFCEKLDIPHKEAIKEAFIQGLSYGCASSVLYLLNTCAYRMG 1001 (1321)
T ss_dssp SCSTTTSSHHHHHHHHHHHHHHTHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999988898899999962798886141488999999999999999999999999999999999999999999875
Q ss_pred HHHHHCCCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEE
Q ss_conf 99985087688899--9999999999999999999798999999999999997526998888877687667776548999
Q 000789 966 SVLVEHGKATFGQV--FKVFFALTISALGVSQTSAMAPDTTKAKDSAASIFEILDSKPKIDSSKDEGMTLSSVGGAIELR 1043 (1283)
Q Consensus 966 ~~lv~~g~~~~g~l--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~ 1043 (1283)
..++..+..+.+.. +.++........++..+...+.+++.+..+.+|+.++++.+++.+..... .+.++..|.|+|+
T Consensus 1002 ~~lv~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~-~~~~~~~g~I~f~ 1080 (1321)
T 4f4c_A 1002 LALIITDPPTMQPMRVLRVMYAITISTSTLGFATSYFPEYAKATFAGGIIFGMLRKISKIDSLSLA-GEKKKLYGKVIFK 1080 (1321)
T ss_dssp HHTTSSSSCSSCHHHHHHHHHHHHTTTSSTTGGGGHHHHHHHHHHHHHHHHHHHHCCCSSCTTCCC-SBCCCCCCCEEEE
T ss_pred HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC-CCCCCCCCEEEEE
T ss_conf 788753765421478999999998778899999999999999999999899986076657776677-8788888818999
Q ss_pred EEEEECCCCCCCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHCCEEEECC
Q ss_conf 87898899988644322158850997999983999988899999960278996568988931899992787503288815
Q 000789 1044 CVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMGLVSQ 1123 (1283)
Q Consensus 1044 ~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~~V~Q 1123 (1283)
||+|+||++++.+||+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|+|||+||+++++++||++|++|||
T Consensus 1081 nVsf~Y~~~~~~~VL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~iDG~di~~i~~~~lR~~i~~V~Q 1160 (1321)
T 4f4c_A 1081 NVRFAYPERPEIEILKGLSFSVEPGQTLALVGPSGCGKSTVVALLERFYDTLGGEIFIDGSEIKTLNPEHTRSQIAIVSQ 1160 (1321)
T ss_dssp EEEECCTTSCSSCSEEEEEEEECTTCEEEEECSTTSSTTSHHHHHTTSSCCSSSEEEETTEETTTBCHHHHHTTEEEECS
T ss_pred EEEEECCCCCCCCCCCCEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEECCEEHHHCCHHHHHHHEEEECC
T ss_conf 87985799998821245169988989999989999819999999956863899789999998654999999854599878
Q ss_pred CCCCCHHHHHHHHHCCC-CCCCCHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEE
Q ss_conf 77777121999972489-99999999999999807289998399876542379999899469999999999715998889
Q 000789 1124 EPVLFNETIRTNIAYGK-QGGATEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILL 1202 (1283)
Q Consensus 1124 d~~Lf~gTIreNl~~~~-~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~ige~G~~LSGGQrQRialARAll~~p~ILi 1202 (1283)
||+||+|||||||+||. +++++|+++++|++.+++++||.+||+||||.|||+|.+||||||||||||||++|+|+|||
T Consensus 1161 dp~LF~gTIreNI~~gld~~~~sd~ei~~Al~~a~l~~~I~~Lp~GldT~vge~G~~LSgGQrQriaiARAllr~~~ILi 1240 (1321)
T 4f4c_A 1161 EPTLFDCSIAENIIYGLDPSSVTMAQVEEAARLANIHNFIAELPEGFETRVGDRGTQLSGGQKQRIAIARALVRNPKILL 1240 (1321)
T ss_dssp SCCCCSEEHHHHHSSSSCTTTSCHHHHHHHHHHTTCHHHHHTSTTTTCSEETTTSCSSCHHHHHHHHHHHHHHSCCSEEE
T ss_pred CCEEECCCHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHCCCEEE
T ss_conf 99732723999974549999999999999999829849997176789998238891569999999999999971799899
Q ss_pred EECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCEEEEEECCEEEEECCHHHHHHCCCCHHHHHHHHHHCC
Q ss_conf 72666799979899999999987299649998049147761398999959889880596789710691449999974207
Q 000789 1203 LDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALMKITDGAYASLVALHVSS 1282 (1283)
Q Consensus 1203 LDEpTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~DrIivl~~G~Ive~Gt~~eLl~~~~g~y~~L~~~~~~~ 1282 (1283)
||||||+||++||+.|+++|++.+++||+|+||||++|+++||+|+|||+|+|+|+|+|+||+++ +|.|++||+.|...
T Consensus 1241 LDEaTSaLD~~tE~~Iq~~l~~~~~~~TvI~IAHRLsTi~~aD~I~Vld~G~IvE~Gth~eLl~~-~g~y~~L~~~Q~~e 1319 (1321)
T 4f4c_A 1241 LDEATSALDTESEKVVQEALDRAREGRTCIVIAHRLNTVMNADCIAVVSNGTIIEKGTHTQLMSE-KGAYYKLTQKQMTE 1319 (1321)
T ss_dssp EESCCCSTTSHHHHHHHHHHTTTSSSSEEEEECSSSSTTTTCSEEEEESSSSEEEEECHHHHHHC-C-------------
T ss_pred EECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHCCEEEEEECCEEEEECCHHHHHHC-CCHHHHHHHHHHHC
T ss_conf 96811157899999999999997399989996068999996999999989899998888999849-80999999999850
No 2
>3g5u_A MCG1178, multidrug resistance protein 1A; P-glycoprotein, PGP, cyclic peptide, membrane protein; 3.80A {Mus musculus} PDB: 3g61_A* 3g60_A*
Probab=1.00 E-value=1 Score=1546.95 Aligned_cols=1223 Identities=42% Similarity=0.731 Sum_probs=1044.2
Q ss_pred CCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-----------------HHHHHHHHHH
Q ss_conf 64149999884322558999999999999897899999999999986238984-----------------1328899999
Q 000789 34 QKVPFYKLFAFADKQDAVLMIVGTISAIGSGLAHPFMTLIFGHLINSFGSSDR-----------------SHVVHEVSKV 96 (1283)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~id~~~~~~~-----------------~~~~~~~~~~ 96 (1283)
.+..++++++|..+.++.+++++++++++.++..|+++++++.++|.+..... ......+..+
T Consensus 31 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (1284)
T 3g5u_A 31 PAVSVLTMFRYAGWLDRLYMLVGTLAAIIHGVALPLMMLIFGDMTDSFASVGNVSKNSTNMSEADKRAMFAKLEEEMTTY 110 (1284)
T ss_dssp --CTTHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCSHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 66569999987265799999999999999999999999999999999861344433222222111110024468899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999999999809943470268820799999968999999998999999
Q 000789 97 AVKFLYLAAGTGIAAFLQVSCWMVTGERQATRIRGLYLKTILRQDIGFFDTETTTGEVIGRMSGDTILIQEAMGEKVGKF 176 (1283)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~~~~~l~~~~~~~~~~~~~~g~l~~r~~~D~~~i~~~~~~~~~~~ 176 (1283)
.+++++++++.+++.+++.+++.+.+.++..++|..+|++++++|+.|||++ ++|++++|+++|++.+++.+...+..+
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~l~~~~~~~f~~~-~~G~l~sr~~~D~~~i~~~~~~~~~~~ 189 (1284)
T 3g5u_A 111 AYYYTGIGAGVLIVAYIQVSFWCLAAGRQIHKIRQKFFHAIMNQEIGWFDVH-DVGELNTRLTDDVSKINEGIGDKIGMF 189 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTHHHHSC-CSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999999999999999999999999986998997568-877899999988999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
Q ss_conf 99999999999999888599999999999999999999999999999999999999999999998139999984608999
Q 000789 177 IQLMSTFFGGFVVALARGWFLALVLLACLPAIVIAGGSMALIMSKMSSRGQIAYSEAGTVVEQTVSGIRTVSSFTGEKQA 256 (1283)
Q Consensus 177 ~~~~~~~i~~~i~~~~~~~~l~l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~ 256 (1283)
+..+..+++.++++++++|++++++++++|+++++..++.+++.+..++.++..++.++++.|.++|+++||+|++|+.+
T Consensus 190 ~~~~~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~ikaf~~e~~~ 269 (1284)
T 3g5u_A 190 FQAMATFFGGFIIGFTRGWKLTLVILAISPVLGLSAGIWAKILSSFTDKELHAYAKAGAVAEEVLAAIRTVIAFGGQKKE 269 (1284)
T ss_dssp HHHHHHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCHHHHHTTCCCCSH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHH
T ss_conf 99999999999999999899999999999999999999999999999999999999999999999787999984653999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999999999999999871474688899999999999999998899999
Q 000789 257 IEKYNNKLQVAYRAAVQQGMVSGIGLGVLMLTVIGTYGLAVWYGSKLIIEKGYNGGTVINVIMAIMTGGMSLGQTSPCLN 336 (1283)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~ 336 (1283)
.++|.+..++..+...+.....+...++..++....+++++|+|.+++..+.+++|.+++++.+.+....++.++.+.+.
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 349 (1284)
T 3g5u_A 270 LERYNNNLEEAKRLGIKKAITANISMGAAFLLIYASYALAFWYGTSLVISKEYSIGQVLTVFFSVLIGAFSVGQASPNIE 349 (1284)
T ss_dssp HHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCSSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999999992998899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCEEEEECCCEEEEECCCCCCH
Q ss_conf 99999999999999871399889999888755675560999979999899999865312118880898999986999839
Q 000789 337 AFAGGQAAAYKMFETIKRKPKIDPYDTSGITLEKIEGEIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGK 416 (1283)
Q Consensus 337 ~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGK 416 (1283)
.++.+..++.|++++++.+++.++.......++...+.|+++||+|+|+++++.++|+|+||++++||+++|||||||||
T Consensus 350 ~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~g~i~~~~v~~~y~~~~~~~vL~~isl~i~~G~~~~ivG~sGsGK 429 (1284)
T 3g5u_A 350 AFANARGAAYEVFKIIDNKPSIDSFSKSGHKPDNIQGNLEFKNIHFSYPSRKEVQILKGLNLKVKSGQTVALVGNSGCGK 429 (1284)
T ss_dssp HHHHHHHHHHHHHHTTSCCCCCSSCCSSCCCCTTCCCCEEEEEEEECCSSTTSCCSEEEEEEEECTTCEEEEECCSSSSH
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCEECCEEEECCCCEEEEECCCCCCH
T ss_conf 99999999999999972898677666567777777771899998997699998710125458975998899989999979
Q ss_pred HHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHCCCEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCHHHHH
Q ss_conf 99998997299999866999996069989888744518882688788010899984399999999999999993299999
Q 000789 417 STVISLVERFYDPDAGEVLIDGIDIKKLQLKWIREKIGLVSQEPILFATSLRENIAYGKENATDQEIRTAIELANAAKFI 496 (1283)
Q Consensus 417 STl~~~l~g~~~~~~G~i~i~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i 496 (1283)
|||+++|+|+|+|++|+|.+||.|+++++..++|++++||+|+|++|++||+|||.+|.++.+++++.++++.+++++++
T Consensus 430 STl~~ll~g~~~~~~G~i~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i 509 (1284)
T 3g5u_A 430 STTVQLMQRLYDPLDGMVSIDGQDIRTINVRYLREIIGVVSQEPVLFATTIAENIRYGREDVTMDEIEKAVKEANAYDFI 509 (1284)
T ss_dssp HHHHHHTTTSSCCSEEEEEETTEEGGGSCHHHHHHHEEEECSSCCCCSSCHHHHHHHHCSSCCHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHCCCCCCCEEEEECCEEHHHCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHH
T ss_conf 99999980788999738999999877579999986548986887537766999974579899999999999982969999
Q ss_pred HHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHH
Q ss_conf 84889865300389998995789999899887019988898278778999989999999998708983999804821342
Q 000789 497 DKLPKGLDTMAGEHGTQLSGGQKQRIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMTSRTTVVVAHRLTTIR 576 (1283)
Q Consensus 497 ~~l~~g~~t~~~~~g~~LSgGqkqrialARal~~~~~illLDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~ 576 (1283)
..+|+|++|.+|++|.+||||||||++||||++++|+|||||||||+||+++++.+++.++...+++|+|+||||++++.
T Consensus 510 ~~l~~g~~t~~~~~g~~LSgGq~QriaiARal~~~p~iliLDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~l~~i~ 589 (1284)
T 3g5u_A 510 MKLPHQFDTLVGERGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAVVQAALDKAREGRTTIVIAHRLSTVR 589 (1284)
T ss_dssp HHSTTGGGCCCSSSSCSSCHHHHHHHHHHHHHHHCCSEEEEESTTCSSCHHHHHHHHHHHHHHHTTSEEEEECSCHHHHT
T ss_pred HHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHH
T ss_conf 74656334501478786599999999999999529998999798777799999999999999739998999940778997
Q ss_pred CCCEEEEEECCEEEEECCHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 06889999598896733946773099970388999751370234432002234674122234421179998863221123
Q 000789 577 NADLIAVVHQGKIVEKGTHDELIKDPEGPYTQLVRLQEGSKEAEDALATDADKLDSSFDILDKAMTRSGSRGESMRRSIS 656 (1283)
Q Consensus 577 ~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 656 (1283)
.||+|++|++|++++.|+|+++++. ++.|.+++..+......+........ ...... ..............
T Consensus 590 ~~d~i~vl~~G~i~~~g~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~------~~~~~~~~~~~~~~ 660 (1284)
T 3g5u_A 590 NADVIAGFDGGVIVEQGNHDELMRE-KGIYFKLVMTQTAGNEIELGNEACKS--KDEIDN------LDMSSKDSGSSLIR 660 (1284)
T ss_dssp TCSEEEECSSSCCCCEECHHHHHHT-TSHHHHHHHHTC------------------------------------------
T ss_pred CCCEEEEEECCEEEEECCHHHHHHC-CCHHHHHHHHHHHCCCCCCCCCCCCC--CCCCCC------CCCCCCCCCCCCCC
T ss_conf 4998999989999997889999867-87799999974300221113333332--222234------43333333320003
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 46889877655445889998755564478898887524686666689999988506915799999999999999999999
Q 000789 657 RHSSGSRHSFGFTYGVPGPINVFETEEGDQGGAERTPLMIEKRQKLSMRRLAYLNKPEFPVLLIGSIAAGIHGVIFPIFG 736 (1283)
Q Consensus 657 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 736 (1283)
+... ..... .+.........++. . . .......++++.++.++.++.++++.++..+.+.+.+.++
T Consensus 661 ~~~~--~~~~~----~~~~~~~~~~~~~~-~-~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 725 (1284)
T 3g5u_A 661 RRST--RKSIC----GPHDQDRKLSTKEA-L-D-------EDVPPASFWRILKLNSTEWPYFVVGIFCAIINGGLQPAFS 725 (1284)
T ss_dssp ------------------------------C-C-------CCCSCCCTTHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCC--CCCCC----CCCCCCCCCCHHHH-H-H-------CCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 4543--33445----64223321102455-5-3-------1366258999999845157999999999999999999999
Q ss_pred HHHHHHHHHHCCCC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 99999999743972--2333206999999999999999999999999999999999999999999997089533235777
Q 000789 737 LLLSSSIRMFFEPE--DKLRKDSRFWALIYLVLGIINLIAVPFQNYFFGVAGGKLIRRIRSLTFEKVVHQEISWFDDPAN 814 (1283)
Q Consensus 737 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~lr~~l~~~il~~~~~~f~~~~~ 814 (1283)
+.+...+..+.... ........+|..++++++++..++.++..+.+...+.++..++|..+|++++++|++||+++.+
T Consensus 726 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ff~~~~~ 805 (1284)
T 3g5u_A 726 VIFSKVVGVFTNGGPPETQRQNSNLFSLLFLILGIISFITFFLQGFTFGKAGEILTKRLRYMVFKSMLRQDVSWFDDPKN 805 (1284)
T ss_dssp HHHHHHHHHHHSSCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHSCSC
T ss_pred HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCC
T ss_conf 99999999985568503367799999999999999999999999999999999999999999999998399888757899
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 82479999963099999999998999999999999999999998599999999999999999999999973899999999
Q 000789 815 SSGSVGARLSTDASTIRSLVGDSLALVVQNIATIAAGLIIAFTANWILAFVILAVSPLMLVQGYTQTKFMKGFSADAKLM 894 (1283)
Q Consensus 815 ~~g~i~~r~~~d~~~i~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 894 (1283)
++|++++|+++|+..++..+...+..++..+..++..+++++.++|.+++++++++|++++..+...++......+..+.
T Consensus 806 ~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~~~~~i~~~~~~~~l~lv~l~~~p~~~~~~~~~~~~~~~~~~~~~~~ 885 (1284)
T 3g5u_A 806 TTGALTTRLANDAAQVKGATGSRLAVIFQNIANLGTGIIISLIYGWQLTLLLLAIVPIIAIAGVVEMKMLSGQALKDKKE 885 (1284)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 88999999999999999999999999999999999999999999699999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 99999999998822599997064799999999997207886799999997999999999999999999999999850876
Q 000789 895 YEEASQVANDAVGSIRTVASFCSEEKVMDLYEKKCEGPLKNGVRRGILSGAGFGFSFLVLYCTNAFCFYIGSVLVEHGKA 974 (1283)
Q Consensus 895 ~~~~~~~~~e~l~g~~tI~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~ 974 (1283)
.......+.|++.|+++||+|+.++.+.++|.+..+...+...+.....+...++...+.++..++++|+|.+++..+.+
T Consensus 886 ~~~~~~~~~e~l~gi~ti~a~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~ 965 (1284)
T 3g5u_A 886 LEGSGKIATEAIENFRTVVSLTREQKFETMYAQSLQIPYRNAMKKAHVFGITFSFTQAMMYFSYAAAFRFGAYLVTQQLM 965 (1284)
T ss_dssp HHHHHHHHHHHHTTCTTTTTCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSSCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 99999999999988999998465999999999999999999999999999999999999999999999999999990980
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCC
Q ss_conf 88899999999999999999999979899999999999999752699888887768766777654899987898899988
Q 000789 975 TFGQVFKVFFALTISALGVSQTSAMAPDTTKAKDSAASIFEILDSKPKIDSSKDEGMTLSSVGGAIELRCVSFKYPTRPD 1054 (1283)
Q Consensus 975 ~~g~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~ 1054 (1283)
+++.++.++.+......++..+......+..+..+.+|+.++++.+|+.........+++...|.|+|+||+|+|+++++
T Consensus 966 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~g~i~~~~v~~~y~~~~~ 1045 (1284)
T 3g5u_A 966 TFENVLLVFSAIVFGAMAVGQVSSFAPDYAKATVSASHIIRIIEKTPEIDSYSTQGLKPNMLEGNVQFSGVVFNYPTRPS 1045 (1284)
T ss_dssp CSTTHHHHHHHHHHHHHHHHHHTSSSCCSTHHHHHHHHHHHHHHSCCSSSSCCSSCCCTTTTSCCEEEEEEEBCCSCGGG
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCC
T ss_conf 69999999999999999999999999999999999999999983887666655566545677785799998997799998
Q ss_pred CCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHCCEEEECCCCCCCHHHHHH
Q ss_conf 64432215885099799998399998889999996027899656898893189999278750328881577777121999
Q 000789 1055 VQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMGLVSQEPVLFNETIRT 1134 (1283)
Q Consensus 1055 ~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~~V~Qd~~Lf~gTIre 1134 (1283)
.++|+|+||+|++||++||||+||||||||+++|+|+|+|++|+|.+||+|+++++.+++|++++||||||.+|++||+|
T Consensus 1046 ~~~l~~vsl~i~~Ge~v~ivG~sGsGKSTl~~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~e 1125 (1284)
T 3g5u_A 1046 IPVLQGLSLEVKKGQTLALVGSSGCGKSTVVQLLERFYDPMAGSVFLDGKEIKQLNVQWLRAQLGIVSQEPILFDCSIAE 1125 (1284)
T ss_dssp CCSBSSCCEEECSSSEEEEECSSSTTHHHHHHHHTTSSCCSEEEEESSSSCTTSSCHHHHTTSCEEEESSCCCCSSBHHH
T ss_pred CEEECCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHHCEEEECCCCCCCCCCHHH
T ss_conf 70020305997699889998899997899999994686789977989999800078999970268987787406666999
Q ss_pred HHHCCCC-CCCCHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHH
Q ss_conf 9724899-999999999999980728999839987654237999989946999999999971599888972666799979
Q 000789 1135 NIAYGKQ-GGATEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAE 1213 (1283)
Q Consensus 1135 Nl~~~~~-~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~ige~G~~LSGGQrQRialARAll~~p~ILiLDEpTSaLD~~ 1213 (1283)
||.++.. ...++++++++++.+++++++.++|+||||.+||+|.+||||||||+|||||++++|+|||||||||+||++
T Consensus 1126 Ni~~~~~~~~~~~~~i~~~~~~~~~~~~i~~l~~gldt~vge~G~~LSgGq~Qrv~iARal~~~p~iLiLDEpTs~lD~~ 1205 (1284)
T 3g5u_A 1126 NIAYGDNSRVVSYEEIVRAAKEANIHQFIDSLPDKYNTRVGDKGTQLSGGQKQRIAIARALVRQPHILLLDEATSALDTE 1205 (1284)
T ss_dssp HHTCCCSSCCCCHHHHHHHHHHHTCHHHHSSTTTGGGCBCSTTSCSSCHHHHHHHHHHHHHHHCCSSEEEESCSSSCCHH
T ss_pred HHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHH
T ss_conf 97466877899999999999983959999727042456117888933899999999999997499999986875557999
Q ss_pred HHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCEEEEEECCEEEEECCHHHHHHCCCCHHHHHHHHHHCC
Q ss_conf 899999999987299649998049147761398999959889880596789710691449999974207
Q 000789 1214 SERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALMKITDGAYASLVALHVSS 1282 (1283)
Q Consensus 1214 te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~DrIivl~~G~Ive~Gt~~eLl~~~~g~y~~L~~~~~~~ 1282 (1283)
++..|++.+++..+++|+|+||||+++++.||||+||++|+|+|+|+|+||+++ +|.|++||..|...
T Consensus 1206 ~~~~i~~~l~~~~~~~tvi~isH~l~~i~~~dri~vl~~G~i~~~g~~~~l~~~-~g~y~~l~~~q~~~ 1273 (1284)
T 3g5u_A 1206 SEKVVQEALDKAREGRTCIVIAHRLSTIQNADLIVVIQNGKVKEHGTHQQLLAQ-KGIYFSMVSVQAGA 1273 (1284)
T ss_dssp HHHHHHHHHHHHSSSSCEEEECSCTTGGGSCSEEEEEETBEEEEEECHHHHHHS-CSHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEEEECCEEEEECCHHHHHHC-CCHHHHHHHHHHHC
T ss_conf 999999999986799989999558799980998999989989997789999847-77799999997613
No 3
>4f4c_A Multidrug resistance protein PGP-1; ABC transporter, ATPase, multi-drug transporter, exporter, A binding, hydrolase,protein transport; HET: NDG NAG BMA MAN 0SA; 3.40A {Caenorhabditis elegans}
Probab=1.00 E-value=1 Score=855.36 Aligned_cols=577 Identities=38% Similarity=0.627 Sum_probs=522.9
Q ss_pred HHHHHHHHHHHCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-------------------CHHHHHHHHHH
Q ss_conf 68999998850691-57999999999999999999999999999974397-------------------22333206999
Q 000789 701 KLSMRRLAYLNKPE-FPVLLIGSIAAGIHGVIFPIFGLLLSSSIRMFFEP-------------------EDKLRKDSRFW 760 (1283)
Q Consensus 701 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~ 760 (1283)
+.++++++.|..+. +..++++++++.+.++..|++..+++..++.+... ..........+
T Consensus 59 ~v~~~~Lfrya~~~d~~l~~~g~~~a~~~G~~~p~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (1321)
T 4f4c_A 59 KVSIPQLYRYTTTLEKLLLFIGTLVAVITGAGLPLMSILQGKVSQAFINEQIVINNNGSTFLPTGQNYTKTDFEHDVMNV 138 (1321)
T ss_dssp CCCHHHHTTTCCHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHTTSCBCSSTTCBCCHHHHHHHHHHH
T ss_pred CCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 77999973156767899999999999999999999999999999999701000145430003443100168999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999999999708953323577782479999963099999999998999
Q 000789 761 ALIYLVLGIINLIAVPFQNYFFGVAGGKLIRRIRSLTFEKVVHQEISWFDDPANSSGSVGARLSTDASTIRSLVGDSLAL 840 (1283)
Q Consensus 761 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~lr~~l~~~il~~~~~~f~~~~~~~g~i~~r~~~d~~~i~~~~~~~~~~ 840 (1283)
++.+++++++..++.++..+++.+.+.+...++|.++|++++++|++|||+ +++|++++|+++|++.+++.+...+..
T Consensus 139 ~~~~~~l~i~~~~~~~~~~~~~~~~~~r~~~~lR~~~~~~ll~~~~~~fd~--~~~G~l~sr~~~D~~~i~~~~~~~l~~ 216 (1321)
T 4f4c_A 139 VWSYAAMTVGMWAAGQITVTCYLYVAEQMNNRLRREFVKSILRQEISWFDT--NHSGTLATKLFDNLERVKEGTGDKIGM 216 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHH--TCCTTHHHHHHHHHHHHHHTSSHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC--CCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999999999999999999999999999997889899879--984899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
Q ss_conf 99999999999999999859999999999999999999999997389999999999999999998822599997064799
Q 000789 841 VVQNIATIAAGLIIAFTANWILAFVILAVSPLMLVQGYTQTKFMKGFSADAKLMYEEASQVANDAVGSIRTVASFCSEEK 920 (1283)
Q Consensus 841 ~i~~~~~~~~~~~~~~~~~~~l~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tI~~~~~~~~ 920 (1283)
++..+..++++++++++.+|.+++++++++|++.+....+.+...+..++.+....+..+.+.|.+.|+++||+|++|+.
T Consensus 217 ~~~~~~~~i~~~i~~~~~~~~l~lv~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~ 296 (1321)
T 4f4c_A 217 AFQYLSQFITGFIVAFTHSWQLTLVMLAVTPIQALCGFAIAKSMSTFAIRETLRYAKAGKVVEETISSIRTVVSLNGLRY 296 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHCHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
T ss_conf 99999999999999999989999999999999999999999999999999999999999999999983999998214299
Q ss_pred HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999720788679999999799999999999999999999999985087688899999999999999999999979
Q 000789 921 VMDLYEKKCEGPLKNGVRRGILSGAGFGFSFLVLYCTNAFCFYIGSVLVEHGKATFGQVFKVFFALTISALGVSQTSAMA 1000 (1283)
Q Consensus 921 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~l~~~~~~~~~~~~~l~~~~~~~ 1000 (1283)
+.++|.+..++..+...+.....+...+...++..+..++++|+|.+++..|.+++|.+++++.+......|+..+...+
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~~~~~~ 376 (1321)
T 4f4c_A 297 ELERYSTAVEEAKKAGVLKGLFLGISFGAMQASNFISFALAFYIGVGWVHDGSLNFGDMLTTFSSVMMGSMALGLAGPQL 376 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999999999599869999999999999999999899999
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEECCCCEEEEECCCCCC
Q ss_conf 89999999999999975269988888776876677765489998789889998864432215885099799998399998
Q 000789 1001 PDTTKAKDSAASIFEILDSKPKIDSSKDEGMTLSSVGGAIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSG 1080 (1283)
Q Consensus 1001 ~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSG 1080 (1283)
..+..+..+.+|+.++++.+|+.....+.+.......|.|+|+||+|+||++++.++|+|+||+|+|||++|||||||||
T Consensus 377 ~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~~~g~I~~~nvsF~Y~~~~~~~vL~~isl~i~~G~~vaivG~sGsG 456 (1321)
T 4f4c_A 377 AVLGTAQGAASGIYEVLDRKPVIDSSSKAGRKDMKIKGDITVENVHFTYPSRPDVPILRGMNLRVNAGQTVALVGSSGCG 456 (1321)
T ss_dssp HHHHHHHHHHHHHHHHTTTSCCSSCSSSCCCCCCCCCCCEEEEEEEECCSSSTTSCSEEEEEEEECTTCEEEEEECSSSC
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEECEEEEECCCCEEEEEECCCCC
T ss_conf 99999999999999997178534566655656778887679998554079999874333318862288278998058985
Q ss_pred HHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHCCEEEECCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCHHH
Q ss_conf 88999999602789965689889318999927875032888157777712199997248999999999999999807289
Q 000789 1081 KSTVIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMGLVSQEPVLFNETIRTNIAYGKQGGATEEEIIAATEASNAHN 1160 (1283)
Q Consensus 1081 KSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~~V~Qd~~Lf~gTIreNl~~~~~~~~sd~ei~~al~~a~l~~ 1160 (1283)
||||+++|+|+|+|++|+|++||+|++++++++||++|+||||||+||++||||||.+|. ++++++++++||+.+++++
T Consensus 457 KSTll~ll~~~~~~~~G~I~idG~~i~~~~~~~lr~~i~~v~Q~~~Lf~~TI~eNI~~g~-~~~~~~~v~~a~~~a~l~~ 535 (1321)
T 4f4c_A 457 KSTIISLLLRYYDVLKGKITIDGVDVRDINLEFLRKNVAVVSQEPALFNCTIEENISLGK-EGITREEMVAACKMANAEK 535 (1321)
T ss_dssp HHHHHHHHTTSSCCSEEEEEETTEETTTSCHHHHHHHEEEECSSCCCCSEEHHHHHHTTC-TTCCHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCHHCCHHHHHHCCCCCCCCCEEECCCHHHHHHHHC-CCCHHHHHHHHHHHCCCHH
T ss_conf 778888754565164486157996501125999850466658753320786167886415-5220999999998756546
Q ss_pred HHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHH
Q ss_conf 99839987654237999989946999999999971599888972666799979899999999987299649998049147
Q 000789 1161 FISALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTT 1240 (1283)
Q Consensus 1161 ~i~~lp~Gldt~ige~G~~LSGGQrQRialARAll~~p~ILiLDEpTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~t 1240 (1283)
||+.||+|+||.|||+|.+||||||||||||||++++|+|+|||||||+||+++|..++++|+++.+++|+|+||||+++
T Consensus 536 ~i~~lp~G~~T~vGe~G~~LSGGQkQRiaiARAl~~~~~IliLDE~tSaLD~~te~~i~~~l~~~~~~~T~iiiaHrls~ 615 (1321)
T 4f4c_A 536 FIKTLPNGYNTLVGDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESEGIVQQALDKAAKGRTTIIIAHRLST 615 (1321)
T ss_dssp HHHHSTTTTSSEESSSSCCCCHHHHHHHHHHHHHTTCCSEEEEESTTTTSCTTTHHHHHHHHHHHHTTSEEEEECSCTTT
T ss_pred HHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCHHH
T ss_conf 88708888860755898877777879999999872599989984554468878999999999998479889997363878
Q ss_pred HHHCCEEEEEECCEEEEECCHHHHHHCCCCHHHHHHHHHHC
Q ss_conf 76139899995988988059678971069144999997420
Q 000789 1241 IKNADIIAVVKNGVIAEQGSHDALMKITDGAYASLVALHVS 1281 (1283)
Q Consensus 1241 i~~~DrIivl~~G~Ive~Gt~~eLl~~~~g~y~~L~~~~~~ 1281 (1283)
+++||+|+||++|+|+|+|+|+||+++ +|.|++|+..|..
T Consensus 616 i~~aD~Iivl~~G~ive~Gth~eL~~~-~g~y~~l~~~q~~ 655 (1321)
T 4f4c_A 616 IRNADLIISCKNGQVVEVGDHRALMAQ-QGLYYDLVTAQTF 655 (1321)
T ss_dssp TTTCSEEEEEETTEEEEEECHHHHHTT-TCHHHHHHHHHHH
T ss_pred HHHCCEEEEEECCEEECCCCHHHHHHH-HHHHHHHHHHHHC
T ss_conf 986898999639965136899999985-3279999996221
No 4
>3g5u_A MCG1178, multidrug resistance protein 1A; P-glycoprotein, PGP, cyclic peptide, membrane protein; 3.80A {Mus musculus} PDB: 3g61_A* 3g60_A*
Probab=1.00 E-value=1 Score=781.34 Aligned_cols=574 Identities=41% Similarity=0.673 Sum_probs=512.5
Q ss_pred HHHHHHHHHCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH------------------HHHHHHHHHHHH
Q ss_conf 99999885069-15799999999999999999999999999997439722------------------333206999999
Q 000789 703 SMRRLAYLNKP-EFPVLLIGSIAAGIHGVIFPIFGLLLSSSIRMFFEPED------------------KLRKDSRFWALI 763 (1283)
Q Consensus 703 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~ 763 (1283)
.+++++.+..+ .+..++++.++..+.++..|+.++.++..++.+..... ........+...
T Consensus 34 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (1284)
T 3g5u_A 34 SVLTMFRYAGWLDRLYMLVGTLAAIIHGVALPLMMLIFGDMTDSFASVGNVSKNSTNMSEADKRAMFAKLEEEMTTYAYY 113 (1284)
T ss_dssp TTHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 69999987265799999999999999999999999999999999861344433222222111110024468899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999999708953323577782479999963099999999998999999
Q 000789 764 YLVLGIINLIAVPFQNYFFGVAGGKLIRRIRSLTFEKVVHQEISWFDDPANSSGSVGARLSTDASTIRSLVGDSLALVVQ 843 (1283)
Q Consensus 764 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~lr~~l~~~il~~~~~~f~~~~~~~g~i~~r~~~d~~~i~~~~~~~~~~~i~ 843 (1283)
+++++++..++.++..+++...+.+...++|..+|++++++|++||++ +++|++++|+++|++.++..+...+..++.
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~l~~~~~~~f~~--~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~ 191 (1284)
T 3g5u_A 114 YTGIGAGVLIVAYIQVSFWCLAAGRQIHKIRQKFFHAIMNQEIGWFDV--HDVGELNTRLTDDVSKINEGIGDKIGMFFQ 191 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTHHHHS--CCSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999999999999999999999999998699899756--887789999998899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
Q ss_conf 99999999999999859999999999999999999999997389999999999999999998822599997064799999
Q 000789 844 NIATIAAGLIIAFTANWILAFVILAVSPLMLVQGYTQTKFMKGFSADAKLMYEEASQVANDAVGSIRTVASFCSEEKVMD 923 (1283)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~l~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tI~~~~~~~~~~~ 923 (1283)
.+..+++.+++++..+|.++++++++.|++++....+.+..++..++.++...+..+++.|++.|+++||+|+.|+.+.+
T Consensus 192 ~~~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~ikaf~~e~~~~~ 271 (1284)
T 3g5u_A 192 AMATFFGGFIIGFTRGWKLTLVILAISPVLGLSAGIWAKILSSFTDKELHAYAKAGAVAEEVLAAIRTVIAFGGQKKELE 271 (1284)
T ss_dssp HHHHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCHHHHHTTCCCCSHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHH
T ss_conf 99999999999999989999999999999999999999999999999999999999999999978799998465399999
Q ss_pred HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999720788679999999799999999999999999999999985087688899999999999999999999979899
Q 000789 924 LYEKKCEGPLKNGVRRGILSGAGFGFSFLVLYCTNAFCFYIGSVLVEHGKATFGQVFKVFFALTISALGVSQTSAMAPDT 1003 (1283)
Q Consensus 924 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~l~~~~~~~~~~~~~l~~~~~~~~~~ 1003 (1283)
+|.+..+...+...+.........+...++.++..++++|+|..++..|.+++|.+++++.+......++..+...+..+
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (1284)
T 3g5u_A 272 RYNNNLEEAKRLGIKKAITANISMGAAFLLIYASYALAFWYGTSLVISKEYSIGQVLTVFFSVLIGAFSVGQASPNIEAF 351 (1284)
T ss_dssp HHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCSSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999999299889999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEECCCCEEEEECCCCCCHHH
Q ss_conf 99999999999975269988888776876677765489998789889998864432215885099799998399998889
Q 000789 1004 TKAKDSAASIFEILDSKPKIDSSKDEGMTLSSVGGAIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKST 1083 (1283)
Q Consensus 1004 ~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKST 1083 (1283)
+.+..+.+|+.++++.+|+.....+.+..++...|.|+|+||+|+|+++++.++|+|+||+|+|||++||||||||||||
T Consensus 352 ~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~g~i~~~~v~~~y~~~~~~~vL~~isl~i~~G~~~~ivG~sGsGKST 431 (1284)
T 3g5u_A 352 ANARGAAYEVFKIIDNKPSIDSFSKSGHKPDNIQGNLEFKNIHFSYPSRKEVQILKGLNLKVKSGQTVALVGNSGCGKST 431 (1284)
T ss_dssp HHHHHHHHHHHHTTSCCCCCSSCCSSCCCCTTCCCCEEEEEEEECCSSTTSCCSEEEEEEEECTTCEEEEECCSSSSHHH
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCEECCEEEECCCCEEEEECCCCCCHHH
T ss_conf 99999999999997289867766656777777777189999899769999871012545897599889998999997999
Q ss_pred HHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHCCEEEECCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCHHHHHH
Q ss_conf 99999602789965689889318999927875032888157777712199997248999999999999999807289998
Q 000789 1084 VIALIERFYDPDSGHVLLDNIELPKFKLSWLRQQMGLVSQEPVLFNETIRTNIAYGKQGGATEEEIIAATEASNAHNFIS 1163 (1283)
Q Consensus 1084 L~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~~V~Qd~~Lf~gTIreNl~~~~~~~~sd~ei~~al~~a~l~~~i~ 1163 (1283)
|+++|+|+|+|++|+|.+||.|+++++.+++|++|+||||||.+|++||+|||.+|. +++++++++++++.+++++++.
T Consensus 432 l~~ll~g~~~~~~G~i~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~~g~-~~~~~~~~~~~~~~~~~~~~i~ 510 (1284)
T 3g5u_A 432 TVQLMQRLYDPLDGMVSIDGQDIRTINVRYLREIIGVVSQEPVLFATTIAENIRYGR-EDVTMDEIEKAVKEANAYDFIM 510 (1284)
T ss_dssp HHHHTTTSSCCSEEEEEETTEEGGGSCHHHHHHHEEEECSSCCCCSSCHHHHHHHHC-SSCCHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHCCCCCCCEEEEECCEEHHHCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCC-CCCCHHHHHHHHHHHCCHHHHH
T ss_conf 999980788999738999999877579999986548986887537766999974579-8999999999999829699997
Q ss_pred HCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHH
Q ss_conf 39987654237999989946999999999971599888972666799979899999999987299649998049147761
Q 000789 1164 ALPHGYETNVGERGVQLSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKN 1243 (1283)
Q Consensus 1164 ~lp~Gldt~ige~G~~LSGGQrQRialARAll~~p~ILiLDEpTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~ 1243 (1283)
.+|+|+||.+||+|.+||||||||+|||||++++|+|||||||||+||+++|..+++.+++..+++|+|+||||+++++.
T Consensus 511 ~l~~g~~t~~~~~g~~LSgGq~QriaiARal~~~p~iliLDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~l~~i~~ 590 (1284)
T 3g5u_A 511 KLPHQFDTLVGERGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAVVQAALDKAREGRTTIVIAHRLSTVRN 590 (1284)
T ss_dssp HSTTGGGCCCSSSSCSSCHHHHHHHHHHHHHHHCCSEEEEESTTCSSCHHHHHHHHHHHHHHHTTSEEEEECSCHHHHTT
T ss_pred HCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHC
T ss_conf 46563345014787865999999999999995299989997987777999999999999997399989999407789974
Q ss_pred CCEEEEEECCEEEEECCHHHHHHCCCCHHHHHHHHHH
Q ss_conf 3989999598898805967897106914499999742
Q 000789 1244 ADIIAVVKNGVIAEQGSHDALMKITDGAYASLVALHV 1280 (1283)
Q Consensus 1244 ~DrIivl~~G~Ive~Gt~~eLl~~~~g~y~~L~~~~~ 1280 (1283)
||+|+||++|+|+|+|+|+||++. +|.|++++..|.
T Consensus 591 ~d~i~vl~~G~i~~~g~~~~l~~~-~~~~~~~~~~~~ 626 (1284)
T 3g5u_A 591 ADVIAGFDGGVIVEQGNHDELMRE-KGIYFKLVMTQT 626 (1284)
T ss_dssp CSEEEECSSSCCCCEECHHHHHHT-TSHHHHHHHHTC
T ss_pred CCEEEEEECCEEEEECCHHHHHHC-CCHHHHHHHHHH
T ss_conf 998999989999997889999867-877999999743
No 5
>3qf4_B Uncharacterized ABC transporter ATP-binding prote TM_0288; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=1.00 E-value=1 Score=737.36 Aligned_cols=570 Identities=31% Similarity=0.475 Sum_probs=506.0
Q ss_pred HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 89999988506915799999999999999999999999999997439722333206999999999999999999999999
Q 000789 702 LSMRRLAYLNKPEFPVLLIGSIAAGIHGVIFPIFGLLLSSSIRMFFEPEDKLRKDSRFWALIYLVLGIINLIAVPFQNYF 781 (1283)
Q Consensus 702 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 781 (1283)
..++++..+.++.++.++++.++..+.+++....++++...++......+ ......+..+++++.++..++.++..++
T Consensus 23 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (598)
T 3qf4_B 23 ATLRRLLGYLRPHTFTLIMVFVFVTVSSILGVLSPYLIGKTIDVVFVPRR--FDLLPRYMLILGTIYALTSLLFWLQGKI 100 (598)
T ss_dssp HHHHHHGGGTGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTC--GGGHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC--HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999973688--8999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999708953323577782479999963099999999998999999999999999999998599
Q 000789 782 FGVAGGKLIRRIRSLTFEKVVHQEISWFDDPANSSGSVGARLSTDASTIRSLVGDSLALVVQNIATIAAGLIIAFTANWI 861 (1283)
Q Consensus 782 ~~~~~~~~~~~lr~~l~~~il~~~~~~f~~~~~~~g~i~~r~~~d~~~i~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 861 (1283)
....+.++..++|..+|++++++|++||++ +++|++++|+++|++.++..+...+..++..++.+++++++++..+|.
T Consensus 101 ~~~~~~~~~~~lr~~l~~~ll~~~~~~~~~--~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~ 178 (598)
T 3qf4_B 101 MLTLSQDVVFRLRKELFEKLQRVPVGFFDR--TPHGDIISRVINDVDNINNVLGNSIIQFFSGIVTLAGAVIMMFRVNVI 178 (598)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSCTHHHHH--SCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCHHHHCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999999997799999768--888999999999999999999999999999999999999999999899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCHHHHHHHHHH
Q ss_conf 99999999999999999999997389999999999999999998822599997064799999999997207886799999
Q 000789 862 LAFVILAVSPLMLVQGYTQTKFMKGFSADAKLMYEEASQVANDAVGSIRTVASFCSEEKVMDLYEKKCEGPLKNGVRRGI 941 (1283)
Q Consensus 862 l~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tI~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 941 (1283)
++++.+++.|++++......+..++..++.++...+..+.+.|.+.|+++||+|+.++.+.++|.+..++..+...+...
T Consensus 179 l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 258 (598)
T 3qf4_B 179 LSLVTLSIVPLTVLITQIVSSQTRKYFYENQRVLGQLNGIIEEDISGLTVIKLFTREEKEMEKFDRVNESLRKVGTKAQI 258 (598)
T ss_dssp HHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999737999997487099999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 99799999999999999999999999985087688899999999999999999999979899999999999999752699
Q 000789 942 LSGAGFGFSFLVLYCTNAFCFYIGSVLVEHGKATFGQVFKVFFALTISALGVSQTSAMAPDTTKAKDSAASIFEILDSKP 1021 (1283)
Q Consensus 942 ~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~~~~~~ 1021 (1283)
......++..++..+..++++++|++++..|.+++|.+++++.+......|+..+...+..++.+..+.+|+.++++.++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~g~ls~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l~~~~ 338 (598)
T 3qf4_B 259 FSGVLPPLMNMVNNLGFALISGFGGWLALKDIITVGTIATFIGYSRQFTRPLNELSNQFNMIQMALASAERIFEILDLEE 338 (598)
T ss_dssp HTTTHHHHHHHHHHHHHHHHHHHHHHHGGGTSSCHHHHHHHHTTTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 99999999999999999999999999998599789999999999999999999999999999999999999999976887
Q ss_pred CCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEE
Q ss_conf 88888776876677765489998789889998864432215885099799998399998889999996027899656898
Q 000789 1022 KIDSSKDEGMTLSSVGGAIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLL 1101 (1283)
Q Consensus 1022 ~~~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~i 1101 (1283)
+.... ...+.+...+.|+++||+|+|++ +.++|+|+||+|++||++|||||||||||||+++|+|+|+|++|+|.+
T Consensus 339 ~~~~~--~~~~~~~~~~~i~~~~v~~~y~~--~~~~l~~isl~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~G~i~~ 414 (598)
T 3qf4_B 339 EKDDP--DAVELREVRGEIEFKNVWFSYDK--KKPVLKDITFHIKPGQKVALVGPTGSGKTTIVNLLMRFYDVDRGQILV 414 (598)
T ss_dssp CCCCS--SCCCCCSCCCCEEEEEEECCSSS--SSCSCCSEEEECCTTCEEEEECCTTSSTTHHHHHHTTSSCCSEEEEEE
T ss_pred CCCCC--CCCCCCCCCCEEEEEEEEEECCC--CCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCEEEEE
T ss_conf 77777--77777777771899998997799--986012227998699889998999996999999994585799808999
Q ss_pred CCCCCCCCCHHHHHCCEEEECCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 89318999927875032888157777712199997248999999999999999807289998399876542379999899
Q 000789 1102 DNIELPKFKLSWLRQQMGLVSQEPVLFNETIRTNIAYGKQGGATEEEIIAATEASNAHNFISALPHGYETNVGERGVQLS 1181 (1283)
Q Consensus 1102 dG~di~~~~~~~lR~~i~~V~Qd~~Lf~gTIreNl~~~~~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~ige~G~~LS 1181 (1283)
||+|+++++.+++|++++||||||.+|++|++||+.++. ++.++++++++++.++++++++.+|+|+||.+|++|.+||
T Consensus 415 ~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~tv~eni~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~~~g~~LS 493 (598)
T 3qf4_B 415 DGIDIRKIKRSSLRSSIGIVLQDTILFSTTVKENLKYGN-PGATDEEIKEAAKLTHSDHFIKHLPEGYETVLTDNGEDLS 493 (598)
T ss_dssp TTEEGGGSCHHHHHHHEEEECTTCCCCSSBHHHHHHSSS-TTCCTTHHHHHTTTTTCHHHHHTSTTGGGCBCHHHHTTSC
T ss_pred CCEEHHHCCHHHHHHCEEEEECCCCCCCCCHHHHHHCCC-CCCCHHHHHHHHHHHCCHHHHHHCCCCCCCHHCCCCCCCC
T ss_conf 999830188999984108990798232463999974479-9999999999999969788897464532364227889879
Q ss_pred HHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCEEEEEECCEEEEECCH
Q ss_conf 46999999999971599888972666799979899999999987299649998049147761398999959889880596
Q 000789 1182 GGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSH 1261 (1283)
Q Consensus 1182 GGQrQRialARAll~~p~ILiLDEpTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~DrIivl~~G~Ive~Gt~ 1261 (1283)
||||||+|||||++++|+|||||||||+||++++..+++.+++..+++|+|+||||+++++.||+|++|++|+++++|+|
T Consensus 494 gGq~Qrv~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~ 573 (598)
T 3qf4_B 494 QGQRQLLAITRAFLANPKILILDEATSNVDTKTEKSIQAAMWKLMEGKTSIIIAHRLNTIKNADLIIVLRDGEIVEMGKH 573 (598)
T ss_dssp HHHHHHHHHHHHHHTCCSEEEECCCCTTCCHHHHHHHHHHHHHHHTTSEEEEESCCTTHHHHCSEEEEECSSSEEECSCH
T ss_pred HHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEEEECCEEEEECCH
T ss_conf 99999999999996499999998976679999999999999998089989999427789971998999989999987789
Q ss_pred HHHHHCCCCHHHHHHHHHHC
Q ss_conf 78971069144999997420
Q 000789 1262 DALMKITDGAYASLVALHVS 1281 (1283)
Q Consensus 1262 ~eLl~~~~g~y~~L~~~~~~ 1281 (1283)
+||++. +|.|++++..|..
T Consensus 574 ~~l~~~-~~~~~~~~~~~~~ 592 (598)
T 3qf4_B 574 DELIQK-RGFYYELFTSQYG 592 (598)
T ss_dssp HHHHHT-TCHHHHHHHHHHG
T ss_pred HHHHHC-CCHHHHHHHHHHH
T ss_conf 999867-8779999999764
No 6
>3qf4_A ABC transporter, ATP-binding protein; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=1.00 E-value=1 Score=737.28 Aligned_cols=567 Identities=26% Similarity=0.383 Sum_probs=463.2
Q ss_pred HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 98850691579999999999999999999999999999743972233320699999999999999999999999999999
Q 000789 707 LAYLNKPEFPVLLIGSIAAGIHGVIFPIFGLLLSSSIRMFFEPEDKLRKDSRFWALIYLVLGIINLIAVPFQNYFFGVAG 786 (1283)
Q Consensus 707 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 786 (1283)
+.++.+++++.++++.++..+.+++....++++...++......+ ......+...++++.++..++.++..++..+.+
T Consensus 14 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (587)
T 3qf4_A 14 LARYLKPYWIFAVLAPLFMVVEVICDLSQPTLLARIVDEGIARGD--FSLVLKTGILMLIVALIGAVGGIGCTVFASYAS 91 (587)
T ss_dssp GGGGTGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999999999999999999999999999873698--799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999970895332357778247999996309999999999899999999999999999999859999999
Q 000789 787 GKLIRRIRSLTFEKVVHQEISWFDDPANSSGSVGARLSTDASTIRSLVGDSLALVVQNIATIAAGLIIAFTANWILAFVI 866 (1283)
Q Consensus 787 ~~~~~~lr~~l~~~il~~~~~~f~~~~~~~g~i~~r~~~d~~~i~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~i~ 866 (1283)
.+...++|..+|+++++.|++||++ +++|++++|+++|++.++..+...+..++..+..++.++++++.++|.+++++
T Consensus 92 ~~~~~~lr~~l~~~ll~~~~~~~~~--~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~l~~ 169 (587)
T 3qf4_A 92 QNFGADLRRDLFRKVLSFSISNVNR--FHTSSLITRLTNDVTQLQNLVMMLLRIVVRAPLLFVGGIVMAVSINVKLSSVL 169 (587)
T ss_dssp HHHHHHHHHHHHHHHHHCCHHHHHH--SCHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHCTTTTHHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999997889799765--88899999999999999999999999999999999999999999989999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999738999999999999999999882259999706479999999999720788679999999799
Q 000789 867 LAVSPLMLVQGYTQTKFMKGFSADAKLMYEEASQVANDAVGSIRTVASFCSEEKVMDLYEKKCEGPLKNGVRRGILSGAG 946 (1283)
Q Consensus 867 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tI~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 946 (1283)
++.+|++.+......+...+..++.++...+..+.+.|.+.|+++||+|++|+.+.++|.+..++..+...+........
T Consensus 170 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (587)
T 3qf4_A 170 IFLIPPIVLLFVWLTKKGNPLFRKIQESTDEVNRVVRENLLGVRVVRAFRREEYENENFRKANESLRRSIISAFSLIVFA 249 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999985599999862149999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 99999999999999999999998508768889999999999999999999997989999999999999975269988888
Q 000789 947 FGFSFLVLYCTNAFCFYIGSVLVEHGKATFGQVFKVFFALTISALGVSQTSAMAPDTTKAKDSAASIFEILDSKPKIDSS 1026 (1283)
Q Consensus 947 ~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~ 1026 (1283)
.++..++..+..++++++|++++..|.+++|.++++..+......|+..+...+..+.++..+.+|+.++++.+++....
T Consensus 250 ~~~~~~~~~~~~~~vl~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~ 329 (587)
T 3qf4_A 250 LPLFIFIVNMGMIAVLWFGGVLVRNNQMEIGSIMAYTNYLMQIMFSLMMIGNILNFIVRASASAKRVLEVLNEKPAIEEA 329 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 99999999999999999999999849938999999999999999999999999999999999999999997689765788
Q ss_pred CCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCCCC
Q ss_conf 77687667776548999878988999886443221588509979999839999888999999602789965689889318
Q 000789 1027 KDEGMTLSSVGGAIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLDNIEL 1106 (1283)
Q Consensus 1027 ~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di 1106 (1283)
.. ..+.+...+.|+++||+|+|++. +.++|+|+||+|++||++|||||||||||||+++|+|+|+|++|+|.+||+|+
T Consensus 330 ~~-~~~~~~~~~~i~~~~v~~~y~~~-~~~~l~~isl~i~~Ge~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~i~g~~i 407 (587)
T 3qf4_A 330 DN-ALALPNVEGSVSFENVEFRYFEN-TDPVLSGVNFSVKPGSLVAVLGETGSGKSTLMNLIPRLIDPERGRVEVDELDV 407 (587)
T ss_dssp TT-CBCCSCCCCCEEEEEEEECSSSS-SCCSEEEEEEEECTTCEEEEECSSSSSHHHHHHTTTTSSCCSEEEEEESSSBG
T ss_pred CC-CCCCCCCCCCEEEEEEEEECCCC-CCCCEECEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEEC
T ss_conf 77-65668888807997889984899-97642111799869988999899999799999999278669986798999983
Q ss_pred CCCCHHHHHCCEEEECCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 99992787503288815777771219999724899999999999999980728999839987654237999989946999
Q 000789 1107 PKFKLSWLRQQMGLVSQEPVLFNETIRTNIAYGKQGGATEEEIIAATEASNAHNFISALPHGYETNVGERGVQLSGGQKQ 1186 (1283)
Q Consensus 1107 ~~~~~~~lR~~i~~V~Qd~~Lf~gTIreNl~~~~~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~ige~G~~LSGGQrQ 1186 (1283)
++++.+++|++++||||||.+|++|++||+.++. ++.++++++++++.+++++++..+|+|+||.++++|.+|||||||
T Consensus 408 ~~~~~~~~r~~i~~v~Q~~~lf~~tv~eni~~~~-~~~~~~~~~~~~~~~~~~~~i~~l~~g~~~~~~~~~~~LSgGqrQ 486 (587)
T 3qf4_A 408 RTVKLKDLRGHISAVPQETVLFSGTIKENLKWGR-EDATDDEIVEAAKIAQIHDFIISLPEGYDSRVERGGRNFSGGQKQ 486 (587)
T ss_dssp GGBCHHHHHHHEEEECSSCCCCSEEHHHHHTTTC-SSCCHHHHHHHHHHTTCHHHHHTSSSGGGCEECSSSCSSCHHHHH
T ss_pred CCCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCC-CCCCHHHHHHHHHHHCCHHHHHHCCCCHHHHHCCCCCCCCHHHHH
T ss_conf 4078999984138977898676755999985248-899999999999996849999756531212751898992999999
Q ss_pred HHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCEEEEEECCEEEEECCHHHHHH
Q ss_conf 99999997159988897266679997989999999998729964999804914776139899995988988059678971
Q 000789 1187 RIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSHDALMK 1266 (1283)
Q Consensus 1187 RialARAll~~p~ILiLDEpTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~DrIivl~~G~Ive~Gt~~eLl~ 1266 (1283)
|++||||++++|+|||||||||+||++++..|++.+++..+++|+|+||||+++++.||+|++|++|+++|+|+|+||++
T Consensus 487 rv~lARal~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~~~~~d~i~vl~~G~i~~~g~~~el~~ 566 (587)
T 3qf4_A 487 RLSIARALVKKPKVLILDDCTSSVDPITEKRILDGLKRYTKGCTTFIITQKIPTALLADKILVLHEGKVAGFGTHKELLE 566 (587)
T ss_dssp HHHHHHHHHTCCSEEEEESCCTTSCHHHHHHHHHHHHHHSTTCEEEEEESCHHHHTTSSEEEEEETTEEEEEECHHHHHH
T ss_pred HHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCEEEEEECCEEEEECCHHHHHH
T ss_conf 99999999729999999797544799999999999998679998999822768898199899998998999788999986
Q ss_pred CCCCHHHHHHHHHHC
Q ss_conf 069144999997420
Q 000789 1267 ITDGAYASLVALHVS 1281 (1283)
Q Consensus 1267 ~~~g~y~~L~~~~~~ 1281 (1283)
. ++.|++++..|..
T Consensus 567 ~-~~~~~~~~~~~~~ 580 (587)
T 3qf4_A 567 H-CKPYREIYESQFG 580 (587)
T ss_dssp H-CHHHHHHHHHHC-
T ss_pred C-CCHHHHHHHHHHC
T ss_conf 7-8399999999846
No 7
>4a82_A Cystic fibrosis transmembrane conductance regulat; CFTR, ION channel, transport protein, casse protein; 2.00A {Homo sapiens} PDB: 2onj_A* 2hyd_A
Probab=1.00 E-value=1 Score=732.08 Aligned_cols=570 Identities=31% Similarity=0.454 Sum_probs=422.6
Q ss_pred HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH-HHHHH----HHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999885069157999999999999999999999999999974397223-33206----9999999999999999999999
Q 000789 705 RRLAYLNKPEFPVLLIGSIAAGIHGVIFPIFGLLLSSSIRMFFEPEDK-LRKDS----RFWALIYLVLGIINLIAVPFQN 779 (1283)
Q Consensus 705 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~i~~~~~~ 779 (1283)
+++.++.+++++.++++.++..+.+.+....++.+...++......+. ..... ..+...++++.++..++.++..
T Consensus 3 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (578)
T 4a82_A 3 KRYLQFVKPYKYRIFATIIVGIIKFGIPMLIPLLIKYAIDGVINNHALTTDEKVHHLTIAIGIALFIFVIVRPPIEFIRQ 82 (578)
T ss_dssp HHHHHHHGGGHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999988999999999999999999999999999999999981687114677888899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999997089533235777824799999630999999999989999999999999999999985
Q 000789 780 YFFGVAGGKLIRRIRSLTFEKVVHQEISWFDDPANSSGSVGARLSTDASTIRSLVGDSLALVVQNIATIAAGLIIAFTAN 859 (1283)
Q Consensus 780 ~~~~~~~~~~~~~lr~~l~~~il~~~~~~f~~~~~~~g~i~~r~~~d~~~i~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 859 (1283)
++..+.+.+...++|..+|++++++|++||++ +++|++++|+++|++.++.++...+..++..++.+++++++++.++
T Consensus 83 ~~~~~~~~~~~~~lr~~l~~~ll~~~~~~~~~--~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~ 160 (578)
T 4a82_A 83 YLAQWTSNKILYDIRKKLYNHLQALSARFYAN--NQVGQVISRVINDVEQTKDFILTGLMNIWLDCITIIIALSIMFFLD 160 (578)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHT--SCHHHHHHHHHHHHHHTHHHHHCCCCCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999998789999768--9869999999999999999999999999999999999999999996
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCHHHHHHHH
Q ss_conf 99999999999999999999999973899999999999999999988225999970647999999999972078867999
Q 000789 860 WILAFVILAVSPLMLVQGYTQTKFMKGFSADAKLMYEEASQVANDAVGSIRTVASFCSEEKVMDLYEKKCEGPLKNGVRR 939 (1283)
Q Consensus 860 ~~l~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tI~~~~~~~~~~~~~~~~~~~~~~~~~~~ 939 (1283)
|.++++.++..|++++......+...+..++..+...+..+.+.|.+.|+++||+|+.|+.+.++|.+..++..+...+.
T Consensus 161 ~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~ 240 (578)
T 4a82_A 161 VKLTLAALFIFPFYILTVYVFFGRLRKLTRERSQALAEVQGFLHERVQGISVVKSFAIEDNEAKNFDKKNTNFLTRALKH 240 (578)
T ss_dssp TTTHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999998249999981664999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 99997999999999999999999999999850876888999999999999999999999798999999999999997526
Q 000789 940 GILSGAGFGFSFLVLYCTNAFCFYIGSVLVEHGKATFGQVFKVFFALTISALGVSQTSAMAPDTTKAKDSAASIFEILDS 1019 (1283)
Q Consensus 940 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~~~~ 1019 (1283)
........+....+..+..++++++|++++..|.+++|.++++..+......|+..+...+..++++..+.+|+.++++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~v~~~g~~~v~~g~lt~g~l~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l~~ 320 (578)
T 4a82_A 241 TRWNAYSFAAINTVTDIGPIIVIGVGAYLAISGSITVGTLAAFVGYLELLFGPLRRLVASFTTLTQSFASMDRVFQLIDE 320 (578)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHTHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99999999999999999999999999999985995899999999999999999999999999999999999999999768
Q ss_pred CCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEE
Q ss_conf 99888887768766777654899987898899988644322158850997999983999988899999960278996568
Q 000789 1020 KPKIDSSKDEGMTLSSVGGAIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHV 1099 (1283)
Q Consensus 1020 ~~~~~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I 1099 (1283)
+++..... ...+.+...+.|+++||+|+|++. +.++|+|+||+|++||++|||||||||||||+++|+|+|+|++|+|
T Consensus 321 ~~~~~~~~-~~~~~~~~~~~i~~~~v~~~y~~~-~~~~l~~isl~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~G~i 398 (578)
T 4a82_A 321 DYDIKNGV-GAQPIEIKQGRIDIDHVSFQYNDN-EAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTSGQI 398 (578)
T ss_dssp CCSSCCCT-TCCCCCCCSCCEEEEEEEECSCSS-SCCSEEEEEEEECTTCEEEEECSTTSSHHHHHTTTTTSSCCSEEEE
T ss_pred CCCCCCCC-CCCCCCCCCCEEEEEEEEEECCCC-CCCCEEEEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCEE
T ss_conf 97666787-766667778807999999975899-9741343379987999999989999859999999846788999679
Q ss_pred EECCCCCCCCCHHHHHCCEEEECCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 98893189999278750328881577777121999972489999999999999998072899983998765423799998
Q 000789 1100 LLDNIELPKFKLSWLRQQMGLVSQEPVLFNETIRTNIAYGKQGGATEEEIIAATEASNAHNFISALPHGYETNVGERGVQ 1179 (1283)
Q Consensus 1100 ~idG~di~~~~~~~lR~~i~~V~Qd~~Lf~gTIreNl~~~~~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~ige~G~~ 1179 (1283)
.+||.|+++++.+++|++++||||+|.+|++|++||+.++. ++.++++++++++.+++++++..+|+|+||.+|++|.+
T Consensus 399 ~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~tv~eni~~~~-~~~~~~~~~~~~~~~~~~~~~~~lp~g~~t~~~~~g~~ 477 (578)
T 4a82_A 399 LIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENILLGR-PTATDEEVVEAAKMANAHDFIMNLPQGYDTEVGERGVK 477 (578)
T ss_dssp EETTEEGGGSCHHHHHHTEEEECSSCCCCSSBHHHHHGGGC-SSCCHHHHHHHHHHTTCHHHHHTSTTGGGCBCCGGGTT
T ss_pred EECCEEHHHCCHHHHHHHEEEEECCCCCCCCCHHHHHHCCC-CCCCHHHHHHHHHHHCCHHHHHHCCCHHHHHHCCCCCC
T ss_conf 99999844278999960068992898347645999985279-99889999999988095999975733010253068896
Q ss_pred CCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCEEEEEECCEEEEEC
Q ss_conf 99469999999999715998889726667999798999999999872996499980491477613989999598898805
Q 000789 1180 LSGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQG 1259 (1283)
Q Consensus 1180 LSGGQrQRialARAll~~p~ILiLDEpTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~DrIivl~~G~Ive~G 1259 (1283)
||||||||++||||++++|++++||||||+||++++..+++.+++..+++|+|+||||+++++.||+|++|++|+++++|
T Consensus 478 LSgGq~Qrv~lAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g 557 (578)
T 4a82_A 478 LSGGQKQRLSIARIFLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVETG 557 (578)
T ss_dssp SCHHHHHHHHHHHHHHHCCSEEEEESTTTTCCHHHHHHHHHHHHHHTTTSEEEEECSSGGGTTTCSEEEEEETTEEEEEE
T ss_pred CCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEEEECCEEEEEC
T ss_conf 79999999999999974999999978654579999999999999980899799983178999719989999899899988
Q ss_pred CHHHHHHCCCCHHHHHHHHHH
Q ss_conf 967897106914499999742
Q 000789 1260 SHDALMKITDGAYASLVALHV 1280 (1283)
Q Consensus 1260 t~~eLl~~~~g~y~~L~~~~~ 1280 (1283)
+|+||++. ++.|++++..|.
T Consensus 558 ~~~el~~~-~~~~~~~~~~q~ 577 (578)
T 4a82_A 558 THRELIAK-QGAYEHLYSIQN 577 (578)
T ss_dssp CHHHHHHT-TSHHHHHHTTTT
T ss_pred CHHHHHHC-CCHHHHHHHHHC
T ss_conf 89999858-838999998506
No 8
>3b5x_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; 5.50A {Vibrio cholerae}
Probab=1.00 E-value=1 Score=719.08 Aligned_cols=569 Identities=30% Similarity=0.447 Sum_probs=498.0
Q ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999885069157999999999999999999999999999974397223332069999-99999999999999999999
Q 000789 703 SMRRLAYLNKPEFPVLLIGSIAAGIHGVIFPIFGLLLSSSIRMFFEPEDKLRKDSRFWA-LIYLVLGIINLIAVPFQNYF 781 (1283)
Q Consensus 703 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~ 781 (1283)
.++++..+.++.++.+.++.++..+.+++....++.+...++......+ . ....+. ..++++.++..++.++..++
T Consensus 12 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (582)
T 3b5x_A 12 TFKRLWTYIRLYKAGLVVSTIALVINAAADTYMISLLKPLLDEGFGNAE--S-NFLRILPFMILGLMFVRGLSGFASSYC 88 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC--H-HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999988999999999999999999999999999999999864686--6-799999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999708953323577782479999963099999999998999999999999999999998599
Q 000789 782 FGVAGGKLIRRIRSLTFEKVVHQEISWFDDPANSSGSVGARLSTDASTIRSLVGDSLALVVQNIATIAAGLIIAFTANWI 861 (1283)
Q Consensus 782 ~~~~~~~~~~~lr~~l~~~il~~~~~~f~~~~~~~g~i~~r~~~d~~~i~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 861 (1283)
..+.+.+...++|..+++++++.|++||++ +++|++++|+++|++.++..+...+..++..++.+++.+++++.++|.
T Consensus 89 ~~~~~~~~~~~lr~~l~~~ll~~~~~~~~~--~~~g~l~~rl~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~ 166 (582)
T 3b5x_A 89 LSWVSGNVVMQMRRRLFNHFMHMPVRFFDQ--ESTGGLLSRITYDSEQVAGATSRALVSIVREGASIIGLLTLMFWNSWQ 166 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCHHHHCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999999998699999778--987899999998899999999999999999999999999999998299
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCHHHHHHHHHH
Q ss_conf 99999999999999999999997389999999999999999998822599997064799999999997207886799999
Q 000789 862 LAFVILAVSPLMLVQGYTQTKFMKGFSADAKLMYEEASQVANDAVGSIRTVASFCSEEKVMDLYEKKCEGPLKNGVRRGI 941 (1283)
Q Consensus 862 l~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tI~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 941 (1283)
+++++++..|++++....+.+...+..++.++...+..+.+.|.+.|+++||+|+.++.+.++|.+..++..+...+...
T Consensus 167 l~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 246 (582)
T 3b5x_A 167 LSLVLIVVAPVVAFAISFVSKRFRKISRNMQTAMGHVTSSAEQMLKGHKVVLSYGGQEVERKRFDKVSNSMRQQTMKLVS 246 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999951999997087599999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 99799999999999999999999999985087688899999999999999999999979899999999999999752699
Q 000789 942 LSGAGFGFSFLVLYCTNAFCFYIGSVLVEHGKATFGQVFKVFFALTISALGVSQTSAMAPDTTKAKDSAASIFEILDSKP 1021 (1283)
Q Consensus 942 ~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~~~~~~ 1021 (1283)
......+...++..+..++++++|++++..|.+++|.++++..+......|+..+...+..++.+..+.+|+.++++.++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~i~~~g~~~v~~g~lt~g~l~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~~l~~~~ 326 (582)
T 3b5x_A 247 AQSIADPVIQMIASLALFAVLFLASVDSIRAELTPGTFTVVFSAMFGLMRPLKALTSVTSEFQRGMAACQTLFGLMDLET 326 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 99999999999999999999999999998599889999999999999999999999999999999999999999975897
Q ss_pred CCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEE
Q ss_conf 88888776876677765489998789889998864432215885099799998399998889999996027899656898
Q 000789 1022 KIDSSKDEGMTLSSVGGAIELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLL 1101 (1283)
Q Consensus 1022 ~~~~~~~~~~~~~~~~g~I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~i 1101 (1283)
+.... ..+.+...+.|+++||+|+|+++ +.++|+|+||+|++||++|||||||||||||+++|+|+|+|++|+|.+
T Consensus 327 ~~~~~---~~~~~~~~~~i~~~~v~~~y~~~-~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~G~i~~ 402 (582)
T 3b5x_A 327 ERDNG---KYEAERVNGEVDVKDVTFTYQGK-EKPALSHVSFSIPQGKTVALVGRSGSGKSTIANLFTRFYDVDSGSICL 402 (582)
T ss_pred CCCCC---CCCCCCCCCEEEEEEEEEECCCC-CCCCCCCCEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEE
T ss_conf 67777---77777788828999989972899-865400416998799989998999997999999996577899987989
Q ss_pred CCCCCCCCCHHHHHCCEEEECCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 89318999927875032888157777712199997248999999999999999807289998399876542379999899
Q 000789 1102 DNIELPKFKLSWLRQQMGLVSQEPVLFNETIRTNIAYGKQGGATEEEIIAATEASNAHNFISALPHGYETNVGERGVQLS 1181 (1283)
Q Consensus 1102 dG~di~~~~~~~lR~~i~~V~Qd~~Lf~gTIreNl~~~~~~~~sd~ei~~al~~a~l~~~i~~lp~Gldt~ige~G~~LS 1181 (1283)
||.|+++++.+++|++++||||+|.+|++|++||+.++..++.++++++++++.++++++++.+|+|+||.++++|.+||
T Consensus 403 ~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~g~~t~~~~~~~~LS 482 (582)
T 3b5x_A 403 DGHDVRDYKLTNLRRHFALVSQNVHLFNDTIANNIAYAAEGEYTREQIEQAARQAHAMEFIENMPQGLDTVIGENGTSLS 482 (582)
T ss_pred CCEEHHHCCHHHHHCCEEEECCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCHHCCCCCCCC
T ss_conf 99985638899996485898279905310299998566889999999999999879899998476533451068888479
Q ss_pred HHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCEEEEEECCEEEEECCH
Q ss_conf 46999999999971599888972666799979899999999987299649998049147761398999959889880596
Q 000789 1182 GGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGSH 1261 (1283)
Q Consensus 1182 GGQrQRialARAll~~p~ILiLDEpTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~DrIivl~~G~Ive~Gt~ 1261 (1283)
||||||++||||++++|++++||||||+||++++..+++.+++..+++|+|+||||+++++.||+|++|++|++++.|+|
T Consensus 483 gGq~qr~~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~ 562 (582)
T 3b5x_A 483 GGQRQRVAIARALLRDAPVLILDEATSALDTESERAIQAALDELQKNKTVLVIAHRLSTIEQADEILVVDEGEIIERGRH 562 (582)
T ss_pred HHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCEEEEEECCEEEEECCH
T ss_conf 99999999999997499999997854468999999999999997289989999368899981998999989989997789
Q ss_pred HHHHHCCCCHHHHHHHHHHC
Q ss_conf 78971069144999997420
Q 000789 1262 DALMKITDGAYASLVALHVS 1281 (1283)
Q Consensus 1262 ~eLl~~~~g~y~~L~~~~~~ 1281 (1283)
+||++. ++.|+++++.|..
T Consensus 563 ~~l~~~-~~~~~~~~~~q~~ 581 (582)
T 3b5x_A 563 ADLLAQ-DGAYAQLHRIQFG 581 (582)
T ss_pred HHHHHC-CCHHHHHHHHHHC
T ss_conf 999848-8589999998612
No 9
>3qf4_B Uncharacterized ABC transporter ATP-binding prote TM_0288; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=1.00 E-value=1 Score=718.98 Aligned_cols=573 Identities=31% Similarity=0.502 Sum_probs=511.9
Q ss_pred CCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 86414999988432255899999999999989789999999999998623898413288999999999999999999999
Q 000789 33 NQKVPFYKLFAFADKQDAVLMIVGTISAIGSGLAHPFMTLIFGHLINSFGSSDRSHVVHEVSKVAVKFLYLAAGTGIAAF 112 (1283)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (1283)
+.+..+++++++.++++ ..+++++++.++.+++.+..|++++.++|.+...... ..+..+++.++++.++..++.+
T Consensus 20 ~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 95 (598)
T 3qf4_B 20 NPTATLRRLLGYLRPHT-FTLIMVFVFVTVSSILGVLSPYLIGKTIDVVFVPRRF---DLLPRYMLILGTIYALTSLLFW 95 (598)
T ss_dssp CHHHHHHHHGGGTGGGH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTCG---GGHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH---HHHHHHHHHHHHHHHHHHHHHH
T ss_conf 27899999999999999-9999999999999999999999999999999736888---9999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999998099434702688207999999689999999989999999999999999999988
Q 000789 113 LQVSCWMVTGERQATRIRGLYLKTILRQDIGFFDTETTTGEVIGRMSGDTILIQEAMGEKVGKFIQLMSTFFGGFVVALA 192 (1283)
Q Consensus 113 ~~~~~~~~~~~~~~~~lR~~~~~~l~~~~~~~~~~~~~~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~i~~~~ 192 (1283)
+..++..+.+.++..++|..++++++++|+.||++. ++|++++|+++|++.+++.+...+..++..+..+++.++++++
T Consensus 96 ~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~~~~~-~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~ 174 (598)
T 3qf4_B 96 LQGKIMLTLSQDVVFRLRKELFEKLQRVPVGFFDRT-PHGDIISRVINDVDNINNVLGNSIIQFFSGIVTLAGAVIMMFR 174 (598)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHSCTHHHHHS-CHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999999999999977999997688-8899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 85999999999999999999999999999999999999999999999981399999846089999999999999999999
Q 000789 193 RGWFLALVLLACLPAIVIAGGSMALIMSKMSSRGQIAYSEAGTVVEQTVSGIRTVSSFTGEKQAIEKYNNKLQVAYRAAV 272 (1283)
Q Consensus 193 ~~~~l~l~~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~ 272 (1283)
++|.++++.++.+|+.+++..++.++..+..++.++..++.++.+.|.++|+++||+|++|+.+.++|.+..++..+...
T Consensus 175 ~~~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~ 254 (598)
T 3qf4_B 175 VNVILSLVTLSIVPLTVLITQIVSSQTRKYFYENQRVLGQLNGIIEEDISGLTVIKLFTREEKEMEKFDRVNESLRKVGT 254 (598)
T ss_dssp HCHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 98999999999999999999999999999999999999999999999973799999748709999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999998714746888999999999999999988999999999999999999987
Q 000789 273 QQGMVSGIGLGVLMLTVIGTYGLAVWYGSKLIIEKGYNGGTVINVIMAIMTGGMSLGQTSPCLNAFAGGQAAAYKMFETI 352 (1283)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l 352 (1283)
+.....++..++..++..+..++++++|.+++..+.+++|.+++++.+......|+..+...+..+..+..+++|+.+++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~g~ls~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l 334 (598)
T 3qf4_B 255 KAQIFSGVLPPLMNMVNNLGFALISGFGGWLALKDIITVGTIATFIGYSRQFTRPLNELSNQFNMIQMALASAERIFEIL 334 (598)
T ss_dssp HHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHGGGTSSCHHHHHHHHTTTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999859978999999999999999999999999999999999999999997
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCC
Q ss_conf 13998899998887556755609999799998999998653121188808989999869998399999899729999986
Q 000789 353 KRKPKIDPYDTSGITLEKIEGEIELRDVYFRYPARPEVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLVERFYDPDAG 432 (1283)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~g~~~~~~G 432 (1283)
+.+++.+... ....++..+.|+++||+|+|++ +.++|+|+||++++||+++|+||||||||||+++|+|+++|++|
T Consensus 335 ~~~~~~~~~~--~~~~~~~~~~i~~~~v~~~y~~--~~~~l~~isl~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~G 410 (598)
T 3qf4_B 335 DLEEEKDDPD--AVELREVRGEIEFKNVWFSYDK--KKPVLKDITFHIKPGQKVALVGPTGSGKTTIVNLLMRFYDVDRG 410 (598)
T ss_dssp TSCCCCCCSS--CCCCCSCCCCEEEEEEECCSSS--SSCSCCSEEEECCTTCEEEEECCTTSSTTHHHHHHTTSSCCSEE
T ss_pred CCCCCCCCCC--CCCCCCCCCEEEEEEEEEECCC--CCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCE
T ss_conf 6887777777--7777777771899998997799--98601222799869988999899999699999999458579980
Q ss_pred EEEECCCCCCCCCHHHHHCCCEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 69999960699898887445188826887880108999843999999999999999932999998488986530038999
Q 000789 433 EVLIDGIDIKKLQLKWIREKIGLVSQEPILFATSLRENIAYGKENATDQEIRTAIELANAAKFIDKLPKGLDTMAGEHGT 512 (1283)
Q Consensus 433 ~i~i~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~ 512 (1283)
+|.+||.|+.+++..++|++++||+|+|++|++|++||+.++.+..+++++.++++.++++++++.+|+|++|.++++|.
T Consensus 411 ~i~~~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~~~g~ 490 (598)
T 3qf4_B 411 QILVDGIDIRKIKRSSLRSSIGIVLQDTILFSTTVKENLKYGNPGATDEEIKEAAKLTHSDHFIKHLPEGYETVLTDNGE 490 (598)
T ss_dssp EEEETTEEGGGSCHHHHHHHEEEECTTCCCCSSBHHHHHHSSSTTCCTTHHHHHTTTTTCHHHHHTSTTGGGCBCHHHHT
T ss_pred EEEECCEEHHHCCHHHHHHCEEEEECCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCHHCCCCC
T ss_conf 89999998301889999841089907982324639999744799999999999999969788897464532364227889
Q ss_pred CCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHCCCEEEEEECCEEEEE
Q ss_conf 89957899998998870199888982787789999899999999987089839998048213420688999959889673
Q 000789 513 QLSGGQKQRIAIARAILKNPKILLLDEATSALDAESERIVQDALVKIMTSRTTVVVAHRLTTIRNADLIAVVHQGKIVEK 592 (1283)
Q Consensus 513 ~LSgGqkqrialARal~~~~~illLDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~~l~~G~i~~~ 592 (1283)
+||||||||++||||++++|++++||||||+||++++..+.+.+.++.+++|+|+||||++.+..||+|++|++|+++++
T Consensus 491 ~LSgGq~Qrv~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~ 570 (598)
T 3qf4_B 491 DLSQGQRQLLAITRAFLANPKILILDEATSNVDTKTEKSIQAAMWKLMEGKTSIIIAHRLNTIKNADLIIVLRDGEIVEM 570 (598)
T ss_dssp TSCHHHHHHHHHHHHHHTCCSEEEECCCCTTCCHHHHHHHHHHHHHHHTTSEEEEESCCTTHHHHCSEEEEECSSSEEEC
T ss_pred CCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEEEECCEEEEE
T ss_conf 87999999999999996499999998976679999999999999998089989999427789971998999989999987
Q ss_pred CCHHHHHCCCCCHHHHHHHHHHC
Q ss_conf 39467730999703889997513
Q 000789 593 GTHDELIKDPEGPYTQLVRLQEG 615 (1283)
Q Consensus 593 g~~~~l~~~~~~~~~~~~~~~~~ 615 (1283)
|+|++++++ ++.|.+++..+.+
T Consensus 571 g~~~~l~~~-~~~~~~~~~~~~~ 592 (598)
T 3qf4_B 571 GKHDELIQK-RGFYYELFTSQYG 592 (598)
T ss_dssp SCHHHHHHT-TCHHHHHHHHHHG
T ss_pred CCHHHHHHC-CCHHHHHHHHHHH
T ss_conf 789999867-8779999999764
No 10
>2yl4_A ATP-binding cassette SUB-family B member 10, mitochondrial; membrane protein, mitochondrial transport; HET: ACP LMT CDL 14Y; 2.85A {Homo sapiens} PDB: 4aa3_A*
Probab=1.00 E-value=1 Score=718.55 Aligned_cols=574 Identities=34% Similarity=0.527 Sum_probs=381.1
Q ss_pred HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99988506915799999999999999999999999999997439722-33320699999999999999999999999999
Q 000789 705 RRLAYLNKPEFPVLLIGSIAAGIHGVIFPIFGLLLSSSIRMFFEPED-KLRKDSRFWALIYLVLGIINLIAVPFQNYFFG 783 (1283)
Q Consensus 705 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 783 (1283)
+++..+.++.++.+.++.++..+.+++.+..++.+...++....... ........+...++++.++..++.++..++..
T Consensus 8 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (595)
T 2yl4_A 8 RKLLGLAYPERRRLAAAVGFLTMSSVISMSAPFFLGKIIDVIYTNPTVDYSDNLTRLCLGLSAVFLCGAAANAIRVYLMQ 87 (595)
T ss_dssp HHHHHHHGGGHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHCTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999988789999999999999999999999999999999973574026679999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999970895332357778247999996309999999999899999999999999999999859999
Q 000789 784 VAGGKLIRRIRSLTFEKVVHQEISWFDDPANSSGSVGARLSTDASTIRSLVGDSLALVVQNIATIAAGLIIAFTANWILA 863 (1283)
Q Consensus 784 ~~~~~~~~~lr~~l~~~il~~~~~~f~~~~~~~g~i~~r~~~d~~~i~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~ 863 (1283)
..+.+...++|..+++++++.|++||++ +++|++++|+++|++.++..+...+..++..++.+++.+++++.++|.++
T Consensus 88 ~~~~~~~~~lr~~l~~~l~~~~~~~~~~--~~~g~l~~r~~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~ 165 (595)
T 2yl4_A 88 TSGQRIVNRLRTSLFSSILRQEVAFFDK--TRTGELINRLSSDTALLGRSVTENLSDGLRAGAQASVGISMMFFVSPNLA 165 (595)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCHHHHHH--SCHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCHHHHCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999998199999777--98488999999999999999999999999999999999999999819999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCHHHHHHHHHHHH
Q ss_conf 99999999999999999999738999999999999999999882259999706479999999999720788679999999
Q 000789 864 FVILAVSPLMLVQGYTQTKFMKGFSADAKLMYEEASQVANDAVGSIRTVASFCSEEKVMDLYEKKCEGPLKNGVRRGILS 943 (1283)
Q Consensus 864 ~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~tI~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 943 (1283)
+++++..|++++......+..++..++.++...+..+.+.|.+.|+++||+|+.++.+.++|.+..++..+...+.....
T Consensus 166 li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (595)
T 2yl4_A 166 TFVLSVVPPVSIIAVIYGRYLRKLTKVTQDSLAQATQLAEERIGNVRTVRAFGKEMTEIEKYASKVDHVMQLARKEAFAR 245 (595)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999981199999837569999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 79999999999999999999999998508768889999999999999999999997989999999999999975269988
Q 000789 944 GAGFGFSFLVLYCTNAFCFYIGSVLVEHGKATFGQVFKVFFALTISALGVSQTSAMAPDTTKAKDSAASIFEILDSKPKI 1023 (1283)
Q Consensus 944 ~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~ 1023 (1283)
....+...++..+..++++++|++++..|.+++|.++++..+......|+..+...+..++.+..+.+|+.++++.+++.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~l~~~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~ 325 (595)
T 2yl4_A 246 AGFFGATGLSGNLIVLSVLYKGGLLMGSAHMTVGELSSFLMYAFWVGISIGGLSSFYSELMKGLGAGGRLWELLEREPKL 325 (595)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 99999999999999999999999999869978999999999999999999999999999999999999999998389766
Q ss_pred CCCCCCCCCCCCCCCC-EEEEEEEEECCCCCCCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEEC
Q ss_conf 8887768766777654-899987898899988644322158850997999983999988899999960278996568988
Q 000789 1024 DSSKDEGMTLSSVGGA-IELRCVSFKYPTRPDVQIFRNLCLSIPSGKTVALVGESGSGKSTVIALIERFYDPDSGHVLLD 1102 (1283)
Q Consensus 1024 ~~~~~~~~~~~~~~g~-I~~~~Vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~id 1102 (1283)
..... ..+.+...+. |+++||+|+|+++++.++|+|+||+|++||++|||||||||||||+++|+|+++|++|+|.+|
T Consensus 326 ~~~~~-~~~~~~~~~~~i~~~~v~~~y~~~~~~~vl~~isl~i~~G~~~~ivG~sGsGKSTLl~~l~g~~~p~~G~i~~~ 404 (595)
T 2yl4_A 326 PFNEG-VILNEKSFQGALEFKNVHFAYPARPEVPIFQDFSLSIPSGSVTALVGPSGSGKSTVLSLLLRLYDPASGTISLD 404 (595)
T ss_dssp CSSCS-BCCCTTTCCCCEEEEEEEEECSSCTTSEEEEEEEEEECTTCEEEEECCTTSSSTHHHHHHTTSSCCSEEEEEET
T ss_pred CCCCC-CCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEEC
T ss_conf 77778-77776789983899988998589988812011279984998899989999979999999825857898379999
Q ss_pred CCCCCCCCHHHHHCCEEEECCCCCCCHHHHHHHHHCCCCC--CCCHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 9318999927875032888157777712199997248999--99999999999980728999839987654237999989
Q 000789 1103 NIELPKFKLSWLRQQMGLVSQEPVLFNETIRTNIAYGKQG--GATEEEIIAATEASNAHNFISALPHGYETNVGERGVQL 1180 (1283)
Q Consensus 1103 G~di~~~~~~~lR~~i~~V~Qd~~Lf~gTIreNl~~~~~~--~~sd~ei~~al~~a~l~~~i~~lp~Gldt~ige~G~~L 1180 (1283)
|+|+++++.+++|++++||||+|.+|++|++|||.++.+. ..++++++++++.++++++++++|+|+||.+|++|.+|
T Consensus 405 g~~i~~~~~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~g~~~~~~~~~~~L 484 (595)
T 2yl4_A 405 GHDIRQLNPVWLRSKIGTVSQEPILFSCSIAENIAYGADDPSSVTAEEIQRVAEVANAVAFIRNFPQGFNTVVGEKGVLL 484 (595)
T ss_dssp TEETTTBCHHHHHHSEEEECSSCCCCSSBHHHHHHTTSSSTTTSCHHHHHHHHHHTTCHHHHHTSSSGGGCBCSSSSCCC
T ss_pred CEEHHHCCHHHHHHCEEEECCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCC
T ss_conf 99811179999973228983688326877999984058776656899999999986979999747320135016887868
Q ss_pred CHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCEEEEEECCEEEEECC
Q ss_conf 94699999999997159988897266679997989999999998729964999804914776139899995988988059
Q 000789 1181 SGGQKQRIAIARAVLKNPKILLLDEATSALDAESERVVQDALERVMVNRTTVVVAHRLTTIKNADIIAVVKNGVIAEQGS 1260 (1283)
Q Consensus 1181 SGGQrQRialARAll~~p~ILiLDEpTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~DrIivl~~G~Ive~Gt 1260 (1283)
|||||||++||||++++|+++|||||||+||++++..+++.+++..+++|+|+||||+++++.||+|++|++|++++.|+
T Consensus 485 SgGq~qrv~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~ 564 (595)
T 2yl4_A 485 SGGQKQRIAIARALLKNPKILLLDEATSALDAENEYLVQEALDRLMDGRTVLVIAHRLSTIKNANMVAVLDQGKITEYGK 564 (595)
T ss_dssp CHHHHHHHHHHHHHHHCCSEEEEECCCSSCCHHHHHHHHHHHHHHHTTSEEEEECCCHHHHHHSSEEEEEETTEEEEEEC
T ss_pred CHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHCCCEEEEEECCEEEEECC
T ss_conf 99999999999999759999999886668998999999999999965997999946878997599899998998999788
Q ss_pred HHHHHHCCCCHHHHHHHHHHC
Q ss_conf 678971069144999997420
Q 000789 1261 HDALMKITDGAYASLVALHVS 1281 (1283)
Q Consensus 1261 ~~eLl~~~~g~y~~L~~~~~~ 1281 (1283)
|+||++.+++.|++++..|..
T Consensus 565 ~~~l~~~~~~~~~~~~~~q~~ 585 (595)
T 2yl4_A 565 HEELLSKPNGIYRKLMNKQSF 585 (595)
T ss_dssp SCC------C-----------
T ss_pred HHHHHHCCCHHHHHHHHHHHC
T ss_conf 999974787299999997430
Done!