Your job contains 1 sequence.
>000790
MEKGAAAKLVDLDKTTQLLEPEITNGGGLFVPNKERPIFRAPGAKAQSGLGVRAVEKGGG
SQIDDGFKVPRVASVAASIDEEEKSESSGIDEVVSNATNGKRSHASRRYRETSARDITDA
ENPMAVGRAGETAGTHRSNEHAYVEVSSSTGSSYSVLSTSSRHDRDDRGSERKYLKDDTR
SESRGPSRRDNYDSKGRYRGREARDRDEPEYGGEYGRKRSKYDGTRRTPGRSDWDDGRWE
WEDTPRREGYSNSSKRYQPSPSPMFVGASPDARLVSPLSTPRSNGYAASPWDHISPSPVP
IRASGSSVKSSSSGYSRRSHQLTFSRESSQSFEDGVADETYSEEHNYEITESMRLEMEYN
SDRAWYDREEGTTMFDTDSSSFILGDDASYQKKEVELAKRLVRKDGSRMSLAQSKKLSQI
TADNHQWEERQLLRSGAVRGTELSTEFDDEEEHKVILLVHDTKPPFLDGRIVFTKQAEPV
MPIKDPTSDMAIISRKGSALVREIREKQTQNKSRQRFWELAGSQMGNILGVKKTAEQVDA
DTAVVGEQGEIDFREDAKFSQHMKKGEAVSDFAKSKTLAEQRQYLPIFSVRDELLQVIRE
NQVVVVVGETGSGKTTQLTQYLLEDGYTTNGIVGCTQPRRVAAMSVAKRVSEEMDTELGD
KVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLFGI
LKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPIFHIPGRTFPVNTLYSKTPCEDYVEAA
VKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQL
PADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQV
FPVSRAAADQRAGRAGRTGPGTCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVLLLKSLK
IDNLLDFDFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMG
EQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAAREKFFVQESDHLTLLYVYQQWKEHQ
YRGDWCEEHYLHVKSLRKAREVRSQLLDILKTLKIPLTSSGHDFDVVRKAICSAYFHNAA
RLKGVGEYINCRNGMPCHLHPSSAIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLS
ELGPMFFSVKDSDTSMLEHKKKQKESKTAMEEEMENLRKIQADEERENKAKEREKRVKER
QQVSMPGWRQGSTTYLRPKKFGL
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 000790
(1283 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|Q17R09 - symbol:DHX38 "Pre-mRNA-splicing factor... 2689 6.6e-285 2
ZFIN|ZDB-GENE-040426-1144 - symbol:dhx38 "DEAH (Asp-Glu-A... 2719 5.5e-283 1
UNIPROTKB|E2RC56 - symbol:DHX38 "Uncharacterized protein"... 2703 2.7e-281 1
UNIPROTKB|Q92620 - symbol:DHX38 "Pre-mRNA-splicing factor... 2697 1.2e-280 1
RGD|1310345 - symbol:Dhx38 "DEAH (Asp-Glu-Ala-His) box po... 2677 1.6e-278 1
UNIPROTKB|F1MVJ1 - symbol:DHX38 "Pre-mRNA-splicing factor... 2623 2.1e-277 2
FB|FBgn0026713 - symbol:l(1)G0007 "lethal (1) G0007" spec... 2650 1.1e-275 1
DICTYBASE|DDB_G0285843 - symbol:helD "putative RNA splici... 2621 1.3e-272 1
WB|WBGene00003389 - symbol:mog-1 species:6239 "Caenorhabd... 2569 2.6e-272 2
UNIPROTKB|P34498 - symbol:mog-1 "Probable pre-mRNA-splici... 2569 2.6e-272 2
UNIPROTKB|F1NY80 - symbol:F1NY80 "Uncharacterized protein... 1573 7.6e-261 3
UNIPROTKB|E1C094 - symbol:E1C094 "Uncharacterized protein... 1573 6.8e-260 3
UNIPROTKB|G4MTU4 - symbol:MGG_11351 "Pre-mRNA-splicing fa... 2480 1.2e-257 1
ASPGD|ASPL0000014477 - symbol:AN4032 species:162425 "Emer... 2468 2.2e-256 1
UNIPROTKB|F1S3A8 - symbol:DHX38 "Uncharacterized protein"... 2402 2.2e-249 1
POMBASE|SPBC1711.17 - symbol:prp16 "ATP-dependent RNA hel... 2300 7.6e-242 2
ZFIN|ZDB-GENE-050809-39 - symbol:dhx8 "DEAH (Asp-Glu-Ala-... 1854 9.6e-198 2
TAIR|locus:2088847 - symbol:AT3G26560 species:3702 "Arabi... 1839 9.8e-196 2
UNIPROTKB|F1S1H3 - symbol:DHX8 "Uncharacterized protein" ... 1850 1.6e-195 2
MGI|MGI:1306823 - symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box... 1850 2.0e-195 2
RGD|1310723 - symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box pol... 1850 5.4e-195 2
UNIPROTKB|D4A805 - symbol:Dhx8 "Protein Dhx8" species:101... 1850 5.4e-195 2
GENEDB_PFALCIPARUM|MAL13P1.322 - symbol:MAL13P1.322 "spli... 1077 5.8e-195 3
UNIPROTKB|C0H5K5 - symbol:MAL13P1.322 "Splicing factor, p... 1077 5.8e-195 3
UNIPROTKB|F1MEM4 - symbol:DHX8 "Uncharacterized protein" ... 1850 6.9e-195 2
UNIPROTKB|Q14562 - symbol:DHX8 "ATP-dependent RNA helicas... 1850 3.8e-194 2
UNIPROTKB|E2R9R9 - symbol:DHX8 "Uncharacterized protein" ... 1850 4.8e-194 2
FB|FBgn0086895 - symbol:pea "peanuts" species:7227 "Droso... 1803 6.1e-194 2
UNIPROTKB|G4NFJ0 - symbol:MGG_08807 "Pre-mRNA-splicing fa... 1811 3.4e-193 2
DICTYBASE|DDB_G0291183 - symbol:dhx8 "putative RNA splici... 1845 1.5e-192 2
WB|WBGene00003393 - symbol:mog-5 species:6239 "Caenorhabd... 1791 5.0e-190 2
UNIPROTKB|Q09530 - symbol:mog-5 "Probable pre-mRNA-splici... 1791 5.0e-190 2
ASPGD|ASPL0000070923 - symbol:AN4721 species:162425 "Emer... 1792 2.8e-189 2
UNIPROTKB|F1P306 - symbol:LOC100858239 "Uncharacterized p... 1774 1.2e-188 2
SGD|S000001794 - symbol:PRP16 "DEAH-box RNA helicase invo... 1765 7.6e-185 2
POMBASE|SPAC10F6.02c - symbol:prp22 "ATP-dependent RNA he... 1731 4.3e-182 2
UNIPROTKB|F5H658 - symbol:DHX8 "ATP-dependent RNA helicas... 1704 1.0e-178 2
CGD|CAL0004768 - symbol:PRP22 species:5476 "Candida albic... 1726 9.3e-178 1
SGD|S000000815 - symbol:PRP22 "DEAH-box RNA-dependent ATP... 1673 6.6e-175 2
ZFIN|ZDB-GENE-030131-8589 - symbol:dhx16 "DEAH (Asp-Glu-A... 1630 9.8e-172 2
UNIPROTKB|O60231 - symbol:DHX16 "Putative pre-mRNA-splici... 1623 2.6e-171 2
GENEDB_PFALCIPARUM|PF10_0294 - symbol:PF10_0294 "RNA heli... 1641 5.4e-171 2
UNIPROTKB|Q8IJA4 - symbol:PF10_0294 "RNA helicase, putati... 1641 5.4e-171 2
ASPGD|ASPL0000006947 - symbol:AN5827 species:162425 "Emer... 1560 8.3e-171 3
RGD|1302963 - symbol:Dhx16 "DEAH (Asp-Glu-Ala-His) box po... 1640 1.1e-170 2
UNIPROTKB|F1PGL2 - symbol:DHX16 "Uncharacterized protein"... 1628 1.1e-170 2
UNIPROTKB|E1BF68 - symbol:DHX16 "Uncharacterized protein"... 1623 3.0e-170 2
UNIPROTKB|F1RU83 - symbol:DHX16 "Putative pre-mRNA-splici... 1622 1.6e-169 2
TAIR|locus:2062492 - symbol:MEE29 "maternal effect embryo... 1623 2.1e-169 2
UNIPROTKB|Q767K6 - symbol:DHX16 "Putative pre-mRNA-splici... 1622 4.3e-169 2
TAIR|locus:2033723 - symbol:ESP3 "ENHANCED SILENCING PHEN... 1619 7.0e-169 2
DICTYBASE|DDB_G0285937 - symbol:dhx16 "putative RNA splic... 1595 9.1e-167 2
UNIPROTKB|G4N1N4 - symbol:MGG_07501 "ATP-dependent RNA he... 1576 9.1e-167 2
WB|WBGene00003392 - symbol:mog-4 species:6239 "Caenorhabd... 1529 5.9e-164 3
UNIPROTKB|O45244 - symbol:mog-4 "Probable pre-mRNA-splici... 1529 5.9e-164 3
POMBASE|SPBC19C2.01 - symbol:cdc28 "ATP-dependent RNA hel... 1559 8.5e-162 2
FB|FBgn0086444 - symbol:l(2)37Cb "lethal (2) 37Cb" specie... 1553 2.0e-159 1
CGD|CAL0005059 - symbol:orf19.2818 species:5476 "Candida ... 1515 2.1e-155 1
POMBASE|SPBC16H5.10c - symbol:prp43 "ATP-dependent RNA he... 1419 3.2e-145 1
TAIR|locus:2065210 - symbol:AT2G47250 species:3702 "Arabi... 1399 5.4e-145 2
TAIR|locus:2095989 - symbol:AT3G62310 species:3702 "Arabi... 1414 1.1e-144 1
FB|FBgn0033160 - symbol:CG11107 species:7227 "Drosophila ... 1394 2.3e-144 2
DICTYBASE|DDB_G0285213 - symbol:dhx15 "putative RNA splic... 1391 2.9e-142 1
MGI|MGI:1099786 - symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) bo... 1360 1.0e-141 2
RGD|1308072 - symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box po... 1360 1.0e-141 2
WB|WBGene00018967 - symbol:F56D2.6 species:6239 "Caenorha... 1352 1.0e-141 2
UNIPROTKB|Q20875 - symbol:F56D2.6 "Putative pre-mRNA-spli... 1352 1.0e-141 2
UNIPROTKB|E2R2U3 - symbol:DHX15 "Uncharacterized protein"... 1360 1.3e-141 2
UNIPROTKB|A5D7D9 - symbol:DHX15 "Uncharacterized protein"... 1360 1.3e-141 2
UNIPROTKB|O43143 - symbol:DHX15 "Putative pre-mRNA-splici... 1360 1.3e-141 2
UNIPROTKB|F1S5A8 - symbol:DHX15 "Uncharacterized protein"... 1360 1.3e-141 2
UNIPROTKB|F1NHI3 - symbol:DHX15 "Uncharacterized protein"... 1353 3.9e-140 2
ZFIN|ZDB-GENE-030131-650 - symbol:dhx15 "DEAH (Asp-Glu-Al... 1338 2.1e-139 2
ASPGD|ASPL0000059403 - symbol:AN0133 species:162425 "Emer... 1361 4.4e-139 1
SGD|S000003088 - symbol:PRP43 "RNA helicase in the DEAH-b... 1361 4.4e-139 1
ZFIN|ZDB-GENE-070410-11 - symbol:zgc:158828 "zgc:158828" ... 1351 5.1e-138 1
UNIPROTKB|E1BDN4 - symbol:DHX35 "Uncharacterized protein"... 1346 1.7e-137 1
DICTYBASE|DDB_G0270110 - symbol:dhx33 "DEAD/DEAH box heli... 1343 3.6e-137 1
UNIPROTKB|D3ZZG1 - symbol:Dhx35 "Protein Dhx35" species:1... 1343 3.6e-137 1
UNIPROTKB|F1SDW0 - symbol:DHX35 "Uncharacterized protein"... 1339 9.5e-137 1
UNIPROTKB|E1C4U5 - symbol:DHX35 "Uncharacterized protein"... 1332 5.2e-136 1
UNIPROTKB|Q9H5Z1 - symbol:DHX35 "Probable ATP-dependent R... 1325 2.9e-135 1
UNIPROTKB|G4NHA6 - symbol:MGG_03893 "Pre-mRNA-splicing fa... 1322 6.0e-135 1
UNIPROTKB|B4DVG8 - symbol:DHX38 "Uncharacterized protein"... 1309 1.4e-133 1
CGD|CAL0000153 - symbol:orf19.1687 species:5476 "Candida ... 1307 2.3e-133 1
RGD|1311165 - symbol:Dhx35 "DEAH (Asp-Glu-Ala-His) box po... 1219 1.1e-131 2
UNIPROTKB|E2RQN1 - symbol:DHX35 "Uncharacterized protein"... 1284 6.4e-131 1
CGD|CAL0002409 - symbol:orf19.5865 species:5476 "Candida ... 1239 4.2e-130 2
UNIPROTKB|Q5THR1 - symbol:DHX35 "Probable ATP-dependent R... 1201 8.8e-130 2
UNIPROTKB|E2RQN7 - symbol:DHX35 "Uncharacterized protein"... 1272 1.2e-129 1
UNIPROTKB|Q9H6R0 - symbol:DHX33 "Putative ATP-dependent R... 1269 2.5e-129 1
MGI|MGI:2445102 - symbol:Dhx33 "DEAH (Asp-Glu-Ala-His) bo... 1264 8.4e-129 1
UNIPROTKB|F1MWZ4 - symbol:F1MWZ4 "Uncharacterized protein... 1260 2.2e-128 1
UNIPROTKB|Q5JP46 - symbol:DHX16 "Putative pre-mRNA-splici... 1244 1.1e-126 1
UNIPROTKB|Q5SQH5 - symbol:DHX16 "Putative pre-mRNA-splici... 1244 1.1e-126 1
TAIR|locus:2197965 - symbol:AT1G26370 species:3702 "Arabi... 825 2.7e-126 2
UNIPROTKB|F5GXM6 - symbol:DHX35 "Probable ATP-dependent R... 1224 1.5e-124 1
UNIPROTKB|E1BYA5 - symbol:DHX33 "Uncharacterized protein"... 1221 3.0e-124 1
UNIPROTKB|F1PRA1 - symbol:DHX33 "Uncharacterized protein"... 1219 4.9e-124 1
POMBASE|SPAC2G11.11c - symbol:prh1 "ATP-dependent RNA hel... 1216 1.0e-123 1
WARNING: Descriptions of 216 database sequences were not reported due to the
limiting value of parameter V = 100.
>UNIPROTKB|Q17R09 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9913 "Bos taurus" [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0005681 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428 KO:K12815
EMBL:BC118085 IPI:IPI00690755 RefSeq:NP_001069266.1
UniGene:Bt.42896 ProteinModelPortal:Q17R09 STRING:Q17R09
PRIDE:Q17R09 GeneID:520046 KEGG:bta:520046 CTD:9785
NextBio:20873012 Uniprot:Q17R09
Length = 1227
Score = 2689 (951.6 bits), Expect = 6.6e-285, Sum P(2) = 6.6e-285
Identities = 568/1149 (49%), Positives = 749/1149 (65%)
Query: 162 RHDRDDRGSERKYLKDDTRSESRGPSRRDNYDSKGRYRGREARDRDEPEYGGEYGRKRSK 221
R R DR + + +T S G S + + + R R RE R+ Y K K
Sbjct: 102 RSGRKDR--HYRSARVETPSHPGGVS--EEFWERSRQRERERREHGV--YASSKDEKDRK 155
Query: 222 YDGTR-RTPGRS-DWDD-GRWEWEDTPRREGYSN-SSKRYQPSPSPMFVGASPDARLVSP 277
+ +R R R D D+ R R+G S+ SS+R +P SP DA S
Sbjct: 156 KERSRDRDCDRKRDRDERDRSRHSGRSERDGGSDRSSRRNEPE-SPRH--RPKDAATPSR 212
Query: 278 LS-TPRSNGYAAS---PWDHISPSPVPIRAXXXXXXXXXXXXXXXXHQLTFSRESSQSFE 333
+ +GY +S W+ SPSP P + +S ++
Sbjct: 213 STWEEEDSGYGSSRRSQWE--SPSPTPSYRDSERSHRPSSRDRDRSVRSRYSDDTPLPTP 270
Query: 334 DGVADETYSEEHNYEITESM---RLEMEYNSDRAWYDREEGTTMFDTDSSS-----FILG 385
+E + + T + R E + +D EE ++ D +++
Sbjct: 271 SYKYNEWADDRRHLGSTPRLSRGRGRREDGEEGISFDTEEERQQWEDDQRQADRDWYMM- 329
Query: 386 DDASYQKKEVELAKR---LVRKDGSRMSLAQSKKLS----QITADNHQWEERQLLRSGAV 438
D Y + LA VR+ + + K++S QI DN +WE ++L SG V
Sbjct: 330 -DEGYDEFHNPLAYSSDDYVRRREQHLHKQKQKRISAQRRQINEDNERWETNRMLTSGVV 388
Query: 439 RGTELSTEFDDEEEHKVILLVHDTKPPFLDGRIVFTKQAEPVMPIKDPTSDMAIISRKGS 498
E+ +F+++ KV L+VH+ PPFLDGRIVFTKQ EPV+P+KD TSD+AII+RKGS
Sbjct: 389 HRLEVDEDFEEDSAAKVHLMVHNLVPPFLDGRIVFTKQPEPVIPVKDATSDLAIIARKGS 448
Query: 499 ALVREIREKQTQNKSRQRFWELAGSQMGNILGVKKTAEQVDADTAVVGEQGEIDFREDAK 558
VR+ RE++ + K++ + WELAG+++G+I+GVKK E D ++ E G++D+R + K
Sbjct: 449 QTVRKHREQKERKKAQHKHWELAGTKLGDIMGVKKEEEP---DKSLT-EDGKVDYRTEQK 504
Query: 559 FSQHMKK-GEAVSDFAKSKTLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQ 617
F+ HMKK EA S+FAK K++ EQRQYLPIF+V+ ELL +IR+N GETGSGKTTQ
Sbjct: 505 FADHMKKKSEASSEFAKKKSILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQ 564
Query: 618 LTQYLLEDGYTTNGIVGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTL 677
LTQYL EDGYT G++GCTQPRRVAAMSVAKRVSEEM LG++VGYAIRFED T STL
Sbjct: 565 LTQYLHEDGYTDYGMIGCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSESTL 624
Query: 678 IKYMTDGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTS 737
IKYMTDG+LLRE+L+++DLD Y I+MDEAHERSL+TDVLFG+L++VVARR D KLIVTS
Sbjct: 625 IKYMTDGILLRESLREADLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTS 684
Query: 738 ATLNAQKFSDFFGSVPIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDIL 797
AT++A+KF+ FFG+VPIFHIPGRTFPV+ L+SKTP EDYVEAAVKQ++ +H++ PGDIL
Sbjct: 685 ATMDAEKFASFFGNVPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDIL 744
Query: 798 IFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTR 857
IFM GQ++IE + E +E+L P L +LPIYSQLP+DLQAKIF+KA +G R
Sbjct: 745 IFMPGQEDIEVTSDQIVEHLEEL-----ENAPALAVLPIYSQLPSDLQAKIFQKAPDGVR 799
Query: 858 KCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXX 917
KCIVATNIAETSLTVDGI +VID+GY K+KV+NP++GMDALQ++P+S
Sbjct: 800 KCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGR 859
Query: 918 XXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQEN 977
C+RLYT+SAY NE+L + VPEIQRTNL NVV F FMDPPP++N
Sbjct: 860 TGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDN 919
Query: 978 ILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLS 1037
+LNSMYQLW+LGAL+N G LT G MVEFPLDP L+KML++ +GC E+L IVSMLS
Sbjct: 920 MLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLS 979
Query: 1038 VPSVFFRPKDRAEESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLR 1097
VP++F+RPK R EESD REKF V ESDHL+ L VY QWK + Y WC +H++H K++R
Sbjct: 980 VPAIFYRPKGREEESDQIREKFAVPESDHLSYLNVYLQWKNNNYSTIWCNDHFIHAKAMR 1039
Query: 1098 KAREVRSQLLDILKTLKIPLTSSGHDFDVVRKAICSAYFHNAARLKGVGEYINCRNGMPC 1157
K REVR+QL DI+ ++ L S G D+D+VRK IC+AYFH AA+LKG+GEY+N R GMPC
Sbjct: 1040 KVREVRAQLKDIMVQQRMSLASCGTDWDIVRKCICAAYFHQAAKLKGIGEYVNIRTGMPC 1099
Query: 1158 HLHPSSAIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFFSVKDSDTSML 1217
HLHP+S+++G+GYTP+Y+VYHEL++TTKEYMQC TAV+ +WL+ELGPMF+SVK + S
Sbjct: 1100 HLHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSVKQAGKSRQ 1159
Query: 1218 EHKKKQKESKTAMEEEMENLRKIQADXXXXXXXXXXXXXXXXXQQVSMPGWR-QGS--TT 1274
E++++ KE +AMEEEM L + Q ++ PG + QG T
Sbjct: 1160 ENRRRAKEEASAMEEEMA-LAEEQLRARRQEQEKRSPLGSVRSTKIYTPGRKEQGEPMTP 1218
Query: 1275 YLRPKKFGL 1283
P +FGL
Sbjct: 1219 RRTPARFGL 1227
Score = 72 (30.4 bits), Expect = 6.6e-285, Sum P(2) = 6.6e-285
Identities = 32/89 (35%), Positives = 40/89 (44%)
Query: 176 KDD--TRSESRGPSRRDNYDSKGRYRGREARDRDEPEYGGEYGRKRSKYDGTR-RTP--- 229
KDD + +SR S +D +SK R EA D D+ G GRK Y R TP
Sbjct: 65 KDDGEDKKKSRISSYKDWEESKDDQRDAEAEDSDQ---AGRSGRKDRHYRSARVETPSHP 121
Query: 230 -GRSD--WDDGRWEWEDTPRREGYSNSSK 255
G S+ W+ R + E R G SSK
Sbjct: 122 GGVSEEFWERSR-QRERERREHGVYASSK 149
>ZFIN|ZDB-GENE-040426-1144 [details] [associations]
symbol:dhx38 "DEAH (Asp-Glu-Ala-His) box
polypeptide 38" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-040426-1144 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
HOVERGEN:HBG039428 KO:K12815 CTD:9785 OrthoDB:EOG4Z62MS
EMBL:BC063744 IPI:IPI00493120 RefSeq:NP_957170.1 UniGene:Dr.38854
ProteinModelPortal:Q6P404 STRING:Q6P404 PRIDE:Q6P404 GeneID:393850
KEGG:dre:393850 NextBio:20814835 ArrayExpress:Q6P404 Bgee:Q6P404
Uniprot:Q6P404
Length = 1258
Score = 2719 (962.2 bits), Expect = 5.5e-283, P = 5.5e-283
Identities = 596/1284 (46%), Positives = 789/1284 (61%)
Query: 38 IFRAPGAKAQSGLGVRAVEKGGGSQIDDGFKVPRVASVAASID---EEEKSESSGIDEVV 94
+ R G+ +G V+K + F+ P + +D +++ E G + +
Sbjct: 7 LHRLEGSDPSVQVGGLIVKKKSAATEQHVFRAPAPRTSLLGLDLLAAQKRKEREGKERLD 66
Query: 95 SNATNGKRSHASRRYRETSARDITDAENPMAVGRAGETAGTHRSNEHAYVEXXXXXXXXX 154
K S + + + E + +D EN GE+ + ++
Sbjct: 67 DQPKKSKVS-SYKDWEEGKSDSGSDDENQ----EDGESRNGKKERKYRVTGSETPSNPGG 121
Query: 155 XXXXXXXRHDR--DDRGSERKYL--KDDTRSESRGPSRRDNYDSKGRYRGREAR-DRDEP 209
+H + DR Y K+D +S+ + SR +D R+R RE R DRDE
Sbjct: 122 VSEEFKRKHQQREKDRREHGVYASSKED-KSKDKNRSRDREHD---RHRDRERRKDRDER 177
Query: 210 EYGGEYGRKRSKYDGTRRTPG--RSDWDDGRWEWEDTPRREGYSNSSKRYQPSPSPMFVG 267
E G S+ + R+ G RS+ R + E R S ++R +P SP
Sbjct: 178 ESSRSRGSSSSR---SERSEGSVRSE----RSQREGCSER--MSRGTRREEPE-SPR--N 225
Query: 268 ASPDARLVSPLSTPRSN-GYAASPWDHI-SPSPVPIRAXXXXXXXXXXXXXXXXHQLTFS 325
D S S + GYA+S H SPSP P +
Sbjct: 226 KPKDLATPSRCSWDEDDSGYASSRHSHWESPSPAPSHRENDRSERSQRSVRDSERR---D 282
Query: 326 RESSQSFEDGVADETYSEEHNYEITESMRLEMEYNSDRAWYD-REEGT--TMFDTDSSSF 382
R S + T S ++N + R + REEG FD +
Sbjct: 283 RSSKPQYPTDTPLPTPSYKYNEWANDRKHFGSTPRLSRGKGEKREEGEGGIQFDDEDEKE 342
Query: 383 ILGDDAS------YQKKE---------VELAKRLVRKDGSRMSLAQSKKLS----QITAD 423
+D Y E + V+K + K++S QI D
Sbjct: 343 QWEEDQRQADRDWYMMDEGYDEFHNPLTSSSDEYVKKREQILQKQTQKRISAQKRQINED 402
Query: 424 NHQWEERQLLRSGAVRGTELSTEFDDEEEHKVILLVHDTKPPFLDGRIVFTKQAEPVMPI 483
N +WE ++L SG V+ E+ +F+++ +V LLVH+ PPFLDGRIVFTKQ EPV+P+
Sbjct: 403 NERWETNRMLTSGVVQRLEVDEDFEEDNAARVHLLVHNLVPPFLDGRIVFTKQPEPVIPV 462
Query: 484 KDPTSDMAIISRKGSALVREIREKQTQNKSRQRFWELAGSQMGNILGVKKTAEQVDADTA 543
KD TSDMAIISRKGS LVR RE++ + K++ + WELAG+++G+I+G++K + D+
Sbjct: 463 KDATSDMAIISRKGSQLVRRHREQKERKKAQHKHWELAGTKLGDIMGIQKKED--GGDSK 520
Query: 544 VVGEQGEIDFREDAKFSQHMK-KGEAVSDFAKSKTLAEQRQYLPIFSVRDELLQVIRENQ 602
VGE G++D+R + KF+ HMK K EA SDFAK KTL EQRQYLPIF+VR +LL +IR+N
Sbjct: 521 AVGEDGKVDYRAEQKFADHMKEKSEASSDFAKKKTLLEQRQYLPIFAVRQQLLNIIRDNN 580
Query: 603 XXXXXGETGSGKTTQLTQYLLEDGYTTNGIVGCTQPRRVAAMSVAKRVSEEMDTELGDKV 662
GETGSGKTTQLTQYL EDGYT+ G+VGCTQPRRVAAMSVAKRVSEEM++ LG++V
Sbjct: 581 IVIVVGETGSGKTTQLTQYLHEDGYTSYGMVGCTQPRRVAAMSVAKRVSEEMNSNLGEEV 640
Query: 663 GYAIRFEDVTGPSTLIKYMTDGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLFGILK 722
GYAIRFED T T+IKYMTDG+LLRE+L++SDLD Y ++MDEAHERSL+TDVLFG+L+
Sbjct: 641 GYAIRFEDCTSEKTMIKYMTDGILLRESLRESDLDHYSAVIMDEAHERSLNTDVLFGLLR 700
Query: 723 KVVARRRDFKLIVTSATLNAQKFSDFFGSVPIFHIPGRTFPVNTLYSKTPCEDYVEAAVK 782
+VV+RR D KLIVTSAT+++ KF+ FFG+VPIFHIPGRTFPV+ L+SKTP EDYVEAAVK
Sbjct: 701 EVVSRRSDLKLIVTSATMDSDKFASFFGNVPIFHIPGRTFPVDILFSKTPQEDYVEAAVK 760
Query: 783 QAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPA 842
QA+ IH++ GDILIFM GQ++IE + ER+ L P L +LPIYSQLP+
Sbjct: 761 QALQIHLSGMVGDILIFMPGQEDIEVTSDQIVERLADL-----ENAPALAVLPIYSQLPS 815
Query: 843 DLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFP 902
DLQAKIF+KA +G RKCIVATNIAETSLTVDGI +V+D+GY K+KV+NP++GMDALQV+P
Sbjct: 816 DLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVVDSGYCKLKVFNPRIGMDALQVYP 875
Query: 903 VSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXX 962
+S CYRLYT+SA+ NEML + +PEIQRTNL NVV
Sbjct: 876 ISQANANQRAGRAGRTGPGQCYRLYTQSAFKNEMLTTTIPEIQRTNLANVVLLLKSLGVQ 935
Query: 963 XXXXFDFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQ 1022
F FMDPPP++N+LNSMYQLW+LGAL+N GALT G MVEFPLDP L+KML++
Sbjct: 936 DLLLFHFMDPPPEDNMLNSMYQLWILGALDNTGALTPTGRLMVEFPLDPALSKMLIVSCD 995
Query: 1023 LGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAAREKFFVQESDHLTLLYVYQQWKEHQYR 1082
+ C ++L IVSMLSVPS+F+RPK R EESD REKF V ESDHLT L VY QWK + Y
Sbjct: 996 MSCSADILIIVSMLSVPSIFYRPKGREEESDQVREKFSVPESDHLTYLNVYLQWKNNNYS 1055
Query: 1083 GDWCEEHYLHVKSLRKAREVRSQLLDILKTLKIPLTSSGHDFDVVRKAICSAYFHNAARL 1142
WC +H++H K++RK REVR+QL DI+ K+ L S G D+DV+RK IC+AYFH AA+L
Sbjct: 1056 SIWCNDHFIHTKAMRKVREVRAQLKDIMVQQKMNLISCGSDWDVIRKCICAAYFHQAAKL 1115
Query: 1143 KGVGEYINCRNGMPCHLHPSSAIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSEL 1202
KG+GEY+N R GMPCHLHP+SA++G+GYTP+Y++YHEL++TTKEYMQC TAV+ +WL+EL
Sbjct: 1116 KGIGEYVNVRTGMPCHLHPTSALFGMGYTPDYIIYHELVMTTKEYMQCVTAVDGEWLAEL 1175
Query: 1203 GPMFFSVKDSDTSMLEHKKKQKESKTAMEEEMENLRKIQADXXXXXXXXXXXXXXXXXQQ 1262
GPMF+S+K + S E++++ KE T MEEEM +L + Q +
Sbjct: 1176 GPMFYSIKHAGKSRQENRRRAKEEITNMEEEM-SLAQEQIRARKEEQDRKNNLGSVRAVK 1234
Query: 1263 VSMPGWRQGST--TYLR-PKKFGL 1283
+ PG ++ T T R P +FGL
Sbjct: 1235 ICTPGRKEEMTPMTPKRTPARFGL 1258
>UNIPROTKB|E2RC56 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 KO:K12815 OMA:PSRSTWE CTD:9785
EMBL:AAEX03004090 RefSeq:XP_536800.2 ProteinModelPortal:E2RC56
Ensembl:ENSCAFT00000032225 GeneID:479669 KEGG:cfa:479669
NextBio:20854813 Uniprot:E2RC56
Length = 1226
Score = 2703 (956.6 bits), Expect = 2.7e-281, P = 2.7e-281
Identities = 568/1148 (49%), Positives = 748/1148 (65%)
Query: 162 RHDRDDRGSERKYLKDDTRSESRGPSRRDNYDSKGRYRGREARDRDEPEYGGEYGRKRSK 221
RH R DR + + +T S G S + + + R R RE R+ Y K K
Sbjct: 102 RHSRKDR--HYRSARVETPSHPGGVS--EEFWERSRQRERERREHGV--YASSKEEKDRK 155
Query: 222 YDGTR-RTPGRSDWDDGRWEWEDTPR--REGYSNSSKRYQPSPSPMFVGASPDARLVSPL 278
+ +R R R D R + R R+G S S+R +P SP DA S
Sbjct: 156 KERSRDRDSDRKRERDERDRSRHSSRSERDGGSERSRRNEPE-SPRH--RPKDAATPSRS 212
Query: 279 S-TPRSNGYA---ASPWDHISPSPVPIRAXXXXXXXXXXXXXXXXHQLTFSRESSQSFED 334
+ +GY S W+ SPSP P + +S ++
Sbjct: 213 TWEEEDSGYGFSRRSQWE--SPSPTPSYRDSDRSHRQSSRDRDRSVRSRYSDDTPLPTPS 270
Query: 335 GVADETYSEEHNYEITESM---RLEMEYNSDRAWYDREEGTTMFDTDSSS-----FILGD 386
+E + + T + R E + +D EE ++ D +++
Sbjct: 271 YKYNEWADDRKHLGSTPRLSRGRGRREDGEEGISFDTEEERQQWEDDQRQADRDWYMM-- 328
Query: 387 DASYQKKEVELA---KRLVRKDGSRMSLAQSKKLS----QITADNHQWEERQLLRSGAVR 439
D Y + LA + VR+ + + K++S QI DN +WE ++L SG V
Sbjct: 329 DEGYDEFHNPLAYSSEDYVRRREQHLHKQKQKRISAQRRQINEDNERWETNRMLTSGVVH 388
Query: 440 GTELSTEFDDEEEHKVILLVHDTKPPFLDGRIVFTKQAEPVMPIKDPTSDMAIISRKGSA 499
E+ +F+++ KV L+VH+ PPFLDGRIVFTKQ EPV+P+KD TSD+AII+RKGS
Sbjct: 389 RLEVDEDFEEDSAAKVHLMVHNLVPPFLDGRIVFTKQPEPVIPVKDATSDLAIIARKGSQ 448
Query: 500 LVREIREKQTQNKSRQRFWELAGSQMGNILGVKKTAEQVDADTAVVGEQGEIDFREDAKF 559
VR+ RE++ + K++ + WELAG+++G+I+GVKK E D A+ E G++D+R + KF
Sbjct: 449 TVRKHREQKERKKAQHKHWELAGTKLGDIMGVKKEEEP---DKALT-EDGKVDYRTEQKF 504
Query: 560 SQHMKK-GEAVSDFAKSKTLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQL 618
+ HMKK EA S+FAK K++ EQRQYLPIF+V+ ELL +IR+N GETGSGKTTQL
Sbjct: 505 ADHMKKKSEASSEFAKKKSILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQL 564
Query: 619 TQYLLEDGYTTNGIVGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLI 678
TQYL EDGYT G++GCTQPRRVAAMSVAKRVSEEM LG++VGYAIRFED T +TLI
Sbjct: 565 TQYLHEDGYTDYGMIGCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSENTLI 624
Query: 679 KYMTDGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSA 738
KYMTDG+LLRE+L+++DLD Y ++MDEAHERSL+TDVLFG+L++VVARR D KLIVTSA
Sbjct: 625 KYMTDGILLRESLREADLDHYSAVIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSA 684
Query: 739 TLNAQKFSDFFGSVPIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILI 798
T++A+KF+ FFG+VPIFHIPGRTFPV+ L+SKTP EDYVEAAVKQ++ +H++ PGDILI
Sbjct: 685 TMDAEKFAAFFGNVPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILI 744
Query: 799 FMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRK 858
FM GQ++IE + E +E+L P L +LPIYSQLP+DLQAKIF+KA +G RK
Sbjct: 745 FMPGQEDIEVTSDQIVEHLEEL-----ENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRK 799
Query: 859 CIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXX 918
CIVATNIAETSLTVDGI +VID+GY K+KV+NP++GMDALQ++P+S
Sbjct: 800 CIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRT 859
Query: 919 XXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENI 978
C+RLYT+SAY NE+L + VPEIQRTNL NVV F FMDPPP++N+
Sbjct: 860 GPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNM 919
Query: 979 LNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSV 1038
LNSMYQLW+LGAL+N G LT G MVEFPLDP L+KML++ +GC E+L IVSMLSV
Sbjct: 920 LNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSV 979
Query: 1039 PSVFFRPKDRAEESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRK 1098
P++F+RPK R EESD REKF V ESDHLT L VY QWK + Y WC +H++H K++RK
Sbjct: 980 PAIFYRPKGREEESDQIREKFAVPESDHLTYLNVYLQWKNNNYSTIWCNDHFIHAKAMRK 1039
Query: 1099 AREVRSQLLDILKTLKIPLTSSGHDFDVVRKAICSAYFHNAARLKGVGEYINCRNGMPCH 1158
REVR+QL DI+ ++ L S G D+D+VRK IC+AYFH AA+LKG+GEY+N R GMPCH
Sbjct: 1040 VREVRAQLKDIMVQQRMSLASCGTDWDIVRKCICAAYFHQAAKLKGIGEYVNIRTGMPCH 1099
Query: 1159 LHPSSAIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFFSVKDSDTSMLE 1218
LHP+S+++G+GYTP+Y+VYHEL++TTKEYMQC TAV+ +WL+ELGPMF+SVK + S E
Sbjct: 1100 LHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSVKQAGKSRQE 1159
Query: 1219 HKKKQKESKTAMEEEMENLRKIQADXXXXXXXXXXXXXXXXXQQVSMPGWR-QGS--TTY 1275
++++ KE +AMEEEM L + Q ++ PG + QG T
Sbjct: 1160 NRRRAKEEASAMEEEMA-LAEEQLRARRQEQEKRSPLGSVRSTKIYTPGRKEQGEPMTPR 1218
Query: 1276 LRPKKFGL 1283
P +FGL
Sbjct: 1219 RTPARFGL 1226
Score = 127 (49.8 bits), Expect = 0.00083, P = 0.00083
Identities = 90/398 (22%), Positives = 144/398 (36%)
Query: 33 NKERPIFRAPGAKAQSGLGVRAVEKGGGSQIDDGFKVP--RVA----SVAASIDEEEKSE 86
+++ I R G S +G + + FK P R + + AS+ E+ E
Sbjct: 5 SEDASIHRLEGTDLDSQVGGLICKTKSAASEQHVFKAPAPRPSLLGLDLLASLKRREREE 64
Query: 87 SSGIDEVVSNATNGKRSHASRRYR--ETSARDITDAENPMAVGRAGETAGTHRSNEHAYV 144
DE + K+S S Y+ E S D DAE + +AG + R A V
Sbjct: 65 K---DE----GEDKKKSRISS-YKDWEESKDDQRDAEEEGS-DQAGRHSRKDRHYRSARV 115
Query: 145 EXXXXXXXXXXXXXXXXRH---DRDDRG--SERKYLKD--DTRSESRGPSRRDNYDSKGR 197
E R +R + G + K KD RS R R+ D + R
Sbjct: 116 ETPSHPGGVSEEFWERSRQRERERREHGVYASSKEEKDRKKERSRDRDSDRKRERDERDR 175
Query: 198 YRGREARDRDEPEYGGEYGRKRSKYDGTRRTPGRSDWDDGRWEWEDTPRREGYSNSSKRY 257
R +RD GG +R++ + R P + R WE+ G+S S+
Sbjct: 176 SRHSSRSERD----GGSERSRRNEPESPRHRP-KDAATPSRSTWEEEDSGYGFSRRSQWE 230
Query: 258 QPSPSPMFVGASPDARLVSPLSTPRSNGYAASPWDHISPSPVPIRAXXXXXXXXXXXXXX 317
PSP+P + + R S RS S + +P P P +
Sbjct: 231 SPSPTPSYRDSDRSHRQ-SSRDRDRS---VRSRYSDDTPLPTP--SYKYNEWADDRKHLG 284
Query: 318 XXHQLTFSRESSQSFEDGVADETYSEEHNYEITESMRLEMEYNSDRAWYDREEGTTMFDT 377
+L+ R + E+G++ +T E +E + R +DR WY +EG F
Sbjct: 285 STPRLSRGRGRREDGEEGISFDTEEERQQWE--DDQR-----QADRDWYMMDEGYDEFHN 337
Query: 378 ----DSSSFILGDDASYQK---KEVELAKRLVRKDGSR 408
S ++ + K K + +R + +D R
Sbjct: 338 PLAYSSEDYVRRREQHLHKQKQKRISAQRRQINEDNER 375
>UNIPROTKB|Q92620 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9606 "Homo sapiens" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;IDA;TAS]
[GO:0005634 "nucleus" evidence=NAS] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=TAS] [GO:0006406 "mRNA export from nucleus"
evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0031124 "mRNA 3'-end
processing" evidence=TAS] Reactome:REACT_71 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AC004682
GO:GO:0005524 GO:GO:0005654 Reactome:REACT_1675 GO:GO:0003676
GO:GO:0006406 GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:CH471166 Reactome:REACT_1788
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0006369 GO:GO:0031124 Reactome:REACT_78
HOVERGEN:HBG039428 KO:K12815 OMA:PSRSTWE CTD:9785 EMBL:AF038391
EMBL:D86977 EMBL:BC004235 EMBL:BC008340 IPI:IPI00294211
RefSeq:NP_054722.2 UniGene:Hs.151218 ProteinModelPortal:Q92620
SMR:Q92620 IntAct:Q92620 STRING:Q92620 PhosphoSite:Q92620
DMDM:85700389 PaxDb:Q92620 PeptideAtlas:Q92620 PRIDE:Q92620
DNASU:9785 Ensembl:ENST00000268482 GeneID:9785 KEGG:hsa:9785
UCSC:uc002fcb.3 GeneCards:GC16P072127 HGNC:HGNC:17211 HPA:HPA041347
MIM:605584 neXtProt:NX_Q92620 PharmGKB:PA27225 InParanoid:Q92620
OrthoDB:EOG4Z62MS PhylomeDB:Q92620 ChiTaRS:DHX38 GenomeRNAi:9785
NextBio:36846 ArrayExpress:Q92620 Bgee:Q92620 CleanEx:HS_DHX38
Genevestigator:Q92620 GermOnline:ENSG00000140829 Uniprot:Q92620
Length = 1227
Score = 2697 (954.5 bits), Expect = 1.2e-280, P = 1.2e-280
Identities = 566/1136 (49%), Positives = 745/1136 (65%)
Query: 178 DTRSESRGPSRRDNYDSKGRYRGREARD-------RDEPEYGGEYGRKRSKYDGTRRTPG 230
+T S G S + + + R R RE R+ ++E ++ E R R YD R
Sbjct: 116 ETPSHPGGVS--EEFWERSRQRERERREHGVYASSKEEKDWKKEKSRDRD-YDRKR---D 169
Query: 231 RSDWDDGRWEWEDTPRREGYSNSSKRYQPSPSPMFVGASPDARLVSPLS-TPRSNGYAAS 289
R + D R + R G SS+R +P SP DA S + +GY +S
Sbjct: 170 RDERDRSRHS-SRSERDGGSERSSRRNEPE-SPRH--RPKDAATPSRSTWEEEDSGYGSS 225
Query: 290 ---PWDHISPSPVPIRAXXXXXXXXXXXXXXXXHQLTFSRESSQSFEDGVADETYSEEHN 346
W+ SPSP P + +S ++ +E + +
Sbjct: 226 RRSQWE--SPSPTPSYRDSERSHRLSTRDRDRSVRGKYSDDTPLPTPSYKYNEWADDRRH 283
Query: 347 YEITESM---RLEMEYNSDRAWYDREEGTTMFDTDSSS-----FILGDDASYQKKEVELA 398
T + R E + +D EE ++ D +++ D Y + LA
Sbjct: 284 LGSTPRLSRGRGRREEGEEGISFDTEEERQQWEDDQRQADRDWYMM--DEGYDEFHNPLA 341
Query: 399 ---KRLVRKDGSRMSLAQSKKLS----QITADNHQWEERQLLRSGAVRGTELSTEFDDEE 451
+ VR+ + + K++S QI DN +WE ++L SG V E+ +F+++
Sbjct: 342 YSSEDYVRRREQHLHKQKQKRISAQRRQINEDNERWETNRMLTSGVVHRLEVDEDFEEDN 401
Query: 452 EHKVILLVHDTKPPFLDGRIVFTKQAEPVMPIKDPTSDMAIISRKGSALVREIREKQTQN 511
KV L+VH+ PPFLDGRIVFTKQ EPV+P+KD TSD+AII+RKGS VR+ RE++ +
Sbjct: 402 AAKVHLMVHNLVPPFLDGRIVFTKQPEPVIPVKDATSDLAIIARKGSQTVRKHREQKERK 461
Query: 512 KSRQRFWELAGSQMGNILGVKKTAEQVDADTAVVGEQGEIDFREDAKFSQHMK-KGEAVS 570
K++ + WELAG+++G+I+GVKK E D AV E G++D+R + KF+ HMK K EA S
Sbjct: 462 KAQHKHWELAGTKLGDIMGVKKEEEP---DKAVT-EDGKVDYRTEQKFADHMKRKSEASS 517
Query: 571 DFAKSKTLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTN 630
+FAK K++ EQRQYLPIF+V+ ELL +IR+N GETGSGKTTQLTQYL EDGYT
Sbjct: 518 EFAKKKSILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDY 577
Query: 631 GIVGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRET 690
G++GCTQPRRVAAMSVAKRVSEEM LG++VGYAIRFED T +TLIKYMTDG+LLRE+
Sbjct: 578 GMIGCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSENTLIKYMTDGILLRES 637
Query: 691 LKDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFG 750
L+++DLD Y I+MDEAHERSL+TDVLFG+L++VVARR D KLIVTSAT++A+KF+ FFG
Sbjct: 638 LREADLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFAAFFG 697
Query: 751 SVPIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAAC 810
+VPIFHIPGRTFPV+ L+SKTP EDYVEAAVKQ++ +H++ PGDILIFM GQ++IE
Sbjct: 698 NVPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTS 757
Query: 811 FALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSL 870
+ E +E+L P L +LPIYSQLP+DLQAKIF+KA +G RKCIVATNIAETSL
Sbjct: 758 DQIVEHLEEL-----ENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSL 812
Query: 871 TVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTES 930
TVDGI +VID+GY K+KV+NP++GMDALQ++P+S C+RLYT+S
Sbjct: 813 TVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYTQS 872
Query: 931 AYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGA 990
AY NE+L + VPEIQRTNL NVV F FMDPPP++N+LNSMYQLW+LGA
Sbjct: 873 AYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGA 932
Query: 991 LNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAE 1050
L+N G LT G MVEFPLDP L+KML++ +GC E+L IVSMLSVP++F+RPK R E
Sbjct: 933 LDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGREE 992
Query: 1051 ESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQLLDIL 1110
ESD REKF V ESDHLT L VY QWK + Y WC +H++H K++RK REVR+QL DI+
Sbjct: 993 ESDQIREKFAVPESDHLTYLNVYLQWKNNNYSTIWCNDHFIHAKAMRKVREVRAQLKDIM 1052
Query: 1111 KTLKIPLTSSGHDFDVVRKAICSAYFHNAARLKGVGEYINCRNGMPCHLHPSSAIYGLGY 1170
++ L S G D+D+VRK IC+AYFH AA+LKG+GEY+N R GMPCHLHP+S+++G+GY
Sbjct: 1053 VQQRMSLASCGTDWDIVRKCICAAYFHQAAKLKGIGEYVNIRTGMPCHLHPTSSLFGMGY 1112
Query: 1171 TPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFFSVKDSDTSMLEHKKKQKESKTAM 1230
TP+Y+VYHEL++TTKEYMQC TAV+ +WL+ELGPMF+SVK + S E++++ KE +AM
Sbjct: 1113 TPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSVKQAGKSRQENRRRAKEEASAM 1172
Query: 1231 EEEMENLRKIQADXXXXXXXXXXXXXXXXXQQVSMPGWR-QGS--TTYLRPKKFGL 1283
EEEM L + Q ++ PG + QG T P +FGL
Sbjct: 1173 EEEMA-LAEEQLRARRQEQEKRSPLGSVRSTKIYTPGRKEQGEPMTPRRTPARFGL 1227
>RGD|1310345 [details] [associations]
symbol:Dhx38 "DEAH (Asp-Glu-Ala-His) box polypeptide 38"
species:10116 "Rattus norvegicus" [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA;ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:1310345
GO:GO:0005524 GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00700000104421 OrthoDB:EOG4Z62MS
IPI:IPI00371467 PRIDE:D4A321 Ensembl:ENSRNOT00000019810
UCSC:RGD:1310345 Uniprot:D4A321
Length = 1228
Score = 2677 (947.4 bits), Expect = 1.6e-278, P = 1.6e-278
Identities = 566/1147 (49%), Positives = 743/1147 (64%)
Query: 168 RGSERKYLKDDTRSESRGPSRRDNYDSKGRYRGREARDRDEPEYG----GEYGRKRSKYD 223
R S R R E+ PS + R R+ R+RD E+G + + R K
Sbjct: 102 RSSRRDRHYRSARVET--PSHPGGVSEEFWERSRQ-RERDRREHGVYASSKEDKDRKKEK 158
Query: 224 GTRRTPGRS-DWDDGRWEWEDTPRRE---GYSNSSKRYQPSPSPMFVGASPDARLVSPLS 279
R R D D R + R E G SS+R +P SP DA S +
Sbjct: 159 SRDRDHDRKRDRADERDRSRHSSRSERDGGSERSSRRNEPE-SPRH--RPKDAATPSRST 215
Query: 280 -TPRSNGYAAS---PWDHISPSPVPIRAXXXXXXXXXXXXXXXXHQLTFSRESSQSFEDG 335
+GY +S W+ +PSP P + S ++
Sbjct: 216 WEEEDSGYGSSRRSQWE--TPSPTPSYRDSERSHRPSTRDRDRSVRSKSSDDTPLPTPSY 273
Query: 336 VADETYSEEHNYEITESM---RLEMEYNSDRAWYDREEGTTMFDTDSSS-----FILGDD 387
+E + + T + R E + +D EE ++ D +++ D
Sbjct: 274 KYNEWADDRRHLGSTPRLSRGRGRREDGEEGIAFDTEEERQQWEDDQRQADRDWYMM--D 331
Query: 388 ASYQKKEVELA---KRLVRKDGSRMSLAQSKKLS----QITADNHQWEERQLLRSGAVRG 440
Y + LA + VR+ + + K++S QI DN +WE ++L SG V
Sbjct: 332 EGYDEFHNPLAYSSEDYVRRREQHLHKQKQKRISAQRRQINEDNERWETNRMLTSGVVHR 391
Query: 441 TELSTEFDDEEEHKVILLVHDTKPPFLDGRIVFTKQAEPVMPIKDPTSDMAIISRKGSAL 500
E+ +F+++ KV L+VH+ PPFLDGRIVFTKQ EPV+P+KD TSD+AII+RKGS
Sbjct: 392 LEVDEDFEEDNAAKVHLMVHNLVPPFLDGRIVFTKQPEPVIPVKDATSDLAIIARKGSQT 451
Query: 501 VREIREKQTQNKSRQRFWELAGSQMGNILGVKKTAEQVDADTAVVGEQGEIDFREDAKFS 560
VR+ RE++ + K++ + WELAG+++G+I+GVKK E D A+ E G++D+R + KF+
Sbjct: 452 VRKHREQKERRKAQHKHWELAGTKLGDIMGVKKEEEP---DKAMT-EDGKVDYRTEQKFA 507
Query: 561 QHMK-KGEAVSDFAKSKTLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLT 619
HMK K EA S+FAK K++ EQRQYLPIF+V+ ELL +IR+N GETGSGKTTQLT
Sbjct: 508 DHMKEKSEASSEFAKKKSILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLT 567
Query: 620 QYLLEDGYTTNGIVGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIK 679
QYL +DGYT G++GCTQPRRVAAMSVAKRVSEEM LG++VGYAIRFED T +TLIK
Sbjct: 568 QYLHQDGYTDYGMIGCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSENTLIK 627
Query: 680 YMTDGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSAT 739
YMTDG+LLRE+L+++DLD Y I+MDEAHERSL+TDVLFG+L++VVARR D KLIVTSAT
Sbjct: 628 YMTDGILLRESLREADLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSAT 687
Query: 740 LNAQKFSDFFGSVPIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIF 799
++A KF+ FFG+VPIFHIPGRTFPV+ L+SKTP EDYVEAAVKQ++ +H++ PGDILIF
Sbjct: 688 MDADKFAAFFGNVPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIF 747
Query: 800 MTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKC 859
M GQ++IE + E +E+L P L +LPIYSQLP+DLQAKIF+KA +G RKC
Sbjct: 748 MPGQEDIEVTSDQIVEHLEEL-----ENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKC 802
Query: 860 IVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXX 919
IVATNIAETSLTVDGI +VID+GY K+KV+NP++GMDALQ++P+S
Sbjct: 803 IVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTG 862
Query: 920 XXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENIL 979
C+RLYT+SAY NE+L + VPEIQRTNL NVV F FMDPPP++N+L
Sbjct: 863 PGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNML 922
Query: 980 NSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVP 1039
NSMYQLW+LGAL+N G LT G MVEFPLDP L+KML++ +GC E+L IVSMLSVP
Sbjct: 923 NSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVP 982
Query: 1040 SVFFRPKDRAEESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKA 1099
++F+RPK R EESD REKF V ESDHLT L VY QWK + Y WC +H++H K++RK
Sbjct: 983 AIFYRPKGREEESDQIREKFAVPESDHLTYLNVYLQWKNNNYSTIWCNDHFIHAKAMRKV 1042
Query: 1100 REVRSQLLDILKTLKIPLTSSGHDFDVVRKAICSAYFHNAARLKGVGEYINCRNGMPCHL 1159
REVR+QL DI+ ++ L S G D+D+VRK IC+AYFH AA+LKG+GEY+N R GMPCHL
Sbjct: 1043 REVRAQLKDIMVQQRMSLASCGTDWDIVRKCICAAYFHQAAKLKGIGEYVNIRTGMPCHL 1102
Query: 1160 HPSSAIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFFSVKDSDTSMLEH 1219
HP+S+++G+GYTP+Y+VYHEL++TTKEYMQC TAV+ +WL+ELGPMF+SVK + S E+
Sbjct: 1103 HPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSVKQAGKSRQEN 1162
Query: 1220 KKKQKESKTAMEEEMENLRKIQADXXXXXXXXXXXXXXXXXQQVSMPGWR-QGS--TTYL 1276
+++ KE +AMEEEM L + Q ++ PG + QG T
Sbjct: 1163 RRRAKEEASAMEEEMA-LAEEQLRARRQEQEKRSPLGSVRSTKIYTPGRKEQGEPMTPRR 1221
Query: 1277 RPKKFGL 1283
P +FGL
Sbjct: 1222 TPARFGL 1228
>UNIPROTKB|F1MVJ1 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9913 "Bos taurus" [GO:0071013 "catalytic
step 2 spliceosome" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00700000104421 OMA:PSRSTWE
IPI:IPI00690755 EMBL:DAAA02046748 EMBL:DAAA02046749
Ensembl:ENSBTAT00000045480 ArrayExpress:F1MVJ1 Uniprot:F1MVJ1
Length = 1226
Score = 2623 (928.4 bits), Expect = 2.1e-277, Sum P(2) = 2.1e-277
Identities = 561/1148 (48%), Positives = 740/1148 (64%)
Query: 162 RHDRDDRGSERKYLKDDTRSESRGPSRRDNYDSKGRYRGREARDRDEPEYGGEYGRKRSK 221
R R DR + + +T S G S + + + R R RE R+ Y K K
Sbjct: 102 RSGRKDR--HYRSARVETPSHPGGVS--EEFWERSRQRERERREHGV--YASSKDEKDRK 155
Query: 222 YDGTR-RTPGRS-DWDD-GRWEWEDTPRREGYSN-SSKRYQPSPSPMFVGASPDARLVSP 277
+ +R R R D D+ R R+G S+ SS+R +P SP DA S
Sbjct: 156 KERSRDRDCDRKRDRDERDRSRHSGRSERDGGSDRSSRRNEPE-SPRH--RPKDAATPSR 212
Query: 278 LS-TPRSNGYAAS---PWDHISPSPVPIRAXXXXXXXXXXXXXXXXHQLTFSRESSQSFE 333
+ +GY +S W+ SPSP P + +S ++
Sbjct: 213 STWEEEDSGYGSSRRSQWE--SPSPTPSYRDSERSHRPSSRDRDRSVRSRYSDDTPLPTP 270
Query: 334 DGVADETYSEEHNYEITESM---RLEMEYNSDRAWYDREEGTTMFDTDSSS----FILGD 386
+E + + T + R E + +D EE ++ D + + D
Sbjct: 271 SYKYNEWADDRRHLGSTPRLSRGRGRREDGEEGISFDTEEERQQWEDDQRQADRDWYMMD 330
Query: 387 DASYQKKEVELAKR---LVRKDGSRMSLAQSKKLS----QITADNHQWEERQLLRSGAVR 439
+ Y + LA VR+ + + K++S QI DN +WE ++L SG V
Sbjct: 331 EG-YDEFHNPLAYSSDDYVRRREQHLHKQKQKRISAQRRQINEDNERWETNRMLTSGVVH 389
Query: 440 GTELSTEFDDEEEHKVILLVHDTKPPFLDGRIVFTKQAEPVMPIKDPTSDMAIISRKGSA 499
E+ +F+++ KV L+VH+ PPFLDGRIVFTKQ EPV+P+KD TSD+AII+RKGS
Sbjct: 390 RLEVDEDFEEDSAAKVHLMVHNLVPPFLDGRIVFTKQPEPVIPVKDATSDLAIIARKGSQ 449
Query: 500 LVREIREKQTQNKSRQRFWELAGSQMGNILGVKKTAEQVDADTAVVGEQGEIDFREDAKF 559
VR+ RE++ + K++ + WELAG+++G+I+GVKK E D ++ E G++D+R + KF
Sbjct: 450 TVRKHREQKERKKAQHKHWELAGTKLGDIMGVKKEEEP---DKSLT-EDGKVDYRTEQKF 505
Query: 560 SQHMKK-GEAVSDFAKSKTLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQL 618
+ HMKK EA S+FAK K++ EQRQYLPIF+V+ ELL +IR+N GETGSGKTTQL
Sbjct: 506 ADHMKKKSEASSEFAKKKSILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQL 565
Query: 619 TQYLLEDGYTTNGIVGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLI 678
TQYL EDGYT G++GCTQPRRVAAMSVAKRVSEEM LG++VGYAIRFED T STLI
Sbjct: 566 TQYLHEDGYTDYGMIGCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSESTLI 625
Query: 679 KYMTDGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSA 738
KYMTDG+LLRE+L+++DLD Y I+MDEAHERSL+TDVLFG+L++VVARR D KLIVTSA
Sbjct: 626 KYMTDGILLRESLREADLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSA 685
Query: 739 TLNAQKFSDFFGSVPIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILI 798
T++A+KF+ FFG+VPIFHIPGRTFPV+ L+SKTP EDYVEAAVKQ++ +H++ PGDILI
Sbjct: 686 TMDAEKFASFFGNVPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILI 745
Query: 799 FMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRK 858
FM GQ++IE + E +E+L P L +LPIYSQLP+DLQAKIF+KA +G RK
Sbjct: 746 FMPGQEDIEVTSDQIVEHLEEL-----ENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRK 800
Query: 859 CIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXX 918
CIVATNIAETSLTVDGI +VID+GY K+KV +P +G L++ +
Sbjct: 801 CIVATNIAETSLTVDGIMFVIDSGYCKLKVSSPSLGGSDLKIMEIQKIQKNINTGCSGCT 860
Query: 919 XXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENI 978
C RLYT+SAY NE+L + VPEIQRTNL NVV F FMDPPP++N+
Sbjct: 861 SPRCC-RLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNM 919
Query: 979 LNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSV 1038
LNSMYQLW+LGAL+N G LT G MVEFPLDP L+KML++ +GC E+L IVSMLSV
Sbjct: 920 LNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSV 979
Query: 1039 PSVFFRPKDRAEESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRK 1098
P++F+RPK R EESD REKF V ESDHL+ L VY QWK + Y WC +H++H K++RK
Sbjct: 980 PAIFYRPKGREEESDQIREKFAVPESDHLSYLNVYLQWKNNNYSTIWCNDHFIHAKAMRK 1039
Query: 1099 AREVRSQLLDILKTLKIPLTSSGHDFDVVRKAICSAYFHNAARLKGVGEYINCRNGMPCH 1158
REVR+QL DI+ ++ L S G D+D+VRK IC+AYFH AA+LKG+GEY+N R GMPCH
Sbjct: 1040 VREVRAQLKDIMVQQRMSLASCGTDWDIVRKCICAAYFHQAAKLKGIGEYVNIRTGMPCH 1099
Query: 1159 LHPSSAIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFFSVKDSDTSMLE 1218
LHP+S+++G+GYTP+Y+VYHEL++TTKEYMQC TAV+ +WL+ELGPMF+SVK + S E
Sbjct: 1100 LHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSVKQAGKSRQE 1159
Query: 1219 HKKKQKESKTAMEEEMENLRKIQADXXXXXXXXXXXXXXXXXQQVSMPGWR-QGS--TTY 1275
++++ KE +AMEEEM L + Q ++ PG + QG T
Sbjct: 1160 NRRRAKEEASAMEEEMA-LAEEQLRARRQEQEKRSPLGSVRSTKIYTPGRKEQGEPMTPR 1218
Query: 1276 LRPKKFGL 1283
P +FGL
Sbjct: 1219 RTPARFGL 1226
Score = 67 (28.6 bits), Expect = 2.1e-277, Sum P(2) = 2.1e-277
Identities = 31/89 (34%), Positives = 40/89 (44%)
Query: 176 KDD--TRSESRGPSRRDNYDSKGRYRGREARDRDEPEYGGEYGRKRSKYDGTR-RTP--- 229
KDD + +SR S +D +SK R EA D ++ G GRK Y R TP
Sbjct: 65 KDDGEDKKKSRISSYKDWEESKDDQRDAEAEDSNQ---AGRSGRKDRHYRSARVETPSHP 121
Query: 230 -GRSD--WDDGRWEWEDTPRREGYSNSSK 255
G S+ W+ R + E R G SSK
Sbjct: 122 GGVSEEFWERSR-QRERERREHGVYASSK 149
>FB|FBgn0026713 [details] [associations]
symbol:l(1)G0007 "lethal (1) G0007" species:7227 "Drosophila
melanogaster" [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0002121 "inter-male
aggressive behavior" evidence=IMP] [GO:0007476 "imaginal
disc-derived wing morphogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014298 GO:GO:0005681 GO:GO:0003676 GO:GO:0002121
GO:GO:0007476 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GO:GO:0000381 KO:K12815 GeneTree:ENSGT00700000104877 OMA:PSRSTWE
UniGene:Dm.4249 GeneID:32373 KEGG:dme:Dmel_CG32604
FlyBase:FBgn0026713 ChiTaRS:l(1)G0007 GenomeRNAi:32373
NextBio:778160 EMBL:AY058553 RefSeq:NP_572947.1 SMR:Q9VY54
MINT:MINT-334469 STRING:Q9VY54 EnsemblMetazoa:FBtr0073900
UCSC:CG32604-RA InParanoid:Q9VY54 Uniprot:Q9VY54
Length = 1222
Score = 2650 (937.9 bits), Expect = 1.1e-275, P = 1.1e-275
Identities = 561/1138 (49%), Positives = 739/1138 (64%)
Query: 168 RGSERKYLKDDTRSESRGPS-----RRDNYDSKGRYRG------REARDRDEPEYGGEYG 216
RG R++ KDDT S + G S R + + R RG E RDRD ++ +
Sbjct: 110 RGQLREH-KDDTPSHTGGVSEKARERLREHIQRDRKRGPVSSTAAEGRDRDR-DWDRDRR 167
Query: 217 RKRSK---YDGTRRTPGRSDWDDGR-WEWEDTPRREGYSNSSKRYQPSP-SPMFVGASPD 271
R R + D RR + D R W+ + R+ + S+R +P P G S
Sbjct: 168 RDRDRDRDRDRDRRQHRERERDRHRSWDRDRGRDRDRDRSMSERSVHTPREPGTPGGSSG 227
Query: 272 ARLVSPLSTPRSN-GYAASPWDHISPSPVPIRAXXXXXXXXXXXXXXXXHQLTFSRESSQ 330
S G S WD +P ++ T +
Sbjct: 228 GISNSSWDDEDGEFGQRKSDWDMPTPRRHGNKSGDWSVRSGGSRRNHGRQDDTVRPTPAH 287
Query: 331 SFEDGVADETYSEEHNY-EITESMRL--EMEYNSDRAWYDREEGTTMFDTDSSSFILGDD 387
+ S + E ES+ L E + DR WY+ +EG +D +++ F G +
Sbjct: 288 RYNQWAHGRKRSGATPWGEDPESLDLWEEEQRRLDREWYNIDEG---YDDENNPFG-GPN 343
Query: 388 ASYQKKEVELAKRLVRKDGSRMSLAQSKKLSQITADNHQWEERQLLRSGAVRGTELSTEF 447
+ Y +K E +L +K R+S AQ + Q DN WE ++L SG V ++ +F
Sbjct: 344 SEYFRKREE---QLEQKRTKRIS-AQQR---QNNRDNELWERNRMLTSGVVTLISVNDDF 396
Query: 448 DDEEEHKVILLVHDTKPPFLDGRIVFTKQAEPVMPIKDPTSDMAIISRKGSALVREIREK 507
D+E +V LLVH PPFLDGRIVFTKQ EPV+P+KDPTSDMA+++RKGSALVR RE+
Sbjct: 397 DEEALERVHLLVHHIIPPFLDGRIVFTKQPEPVVPVKDPTSDMALLARKGSALVRNYREQ 456
Query: 508 QTQNKSRQRFWELAGSQMGNILGVKKTAEQVDADTAVVGEQGEIDFREDAKFSQHMKKGE 567
+ + K++++ WEL+G+++GNI+GV++ ++ D D E+ + D+R+D KF+ HM+ +
Sbjct: 457 KERRKAQKKHWELSGTKLGNIMGVQRPQDE-D-DMRFDKEKDKADYRKDQKFADHMRDQD 514
Query: 568 A--VSDFAKSKTLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLED 625
SDF++ KT++EQR++LP+F+ R ELL VIREN GETGSGKTTQLTQYL ED
Sbjct: 515 TGGKSDFSRKKTISEQRRFLPVFASRQELLNVIRENSVIIIVGETGSGKTTQLTQYLHED 574
Query: 626 GYTTNGIVGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGV 685
GY+ G++GCTQPRRVAAMSVAKRVS+EMDT+LG+ VGYAIRFED T T+IKYMTDG+
Sbjct: 575 GYSKRGMIGCTQPRRVAAMSVAKRVSDEMDTQLGEDVGYAIRFEDCTSERTVIKYMTDGI 634
Query: 686 LLRETLKDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKF 745
LLRE+L+D +LD Y I+MDEAHERSLSTDVLFG+L+++VARR D KLIVTSAT+++ KF
Sbjct: 635 LLRESLRDPELDSYSAIIMDEAHERSLSTDVLFGLLREIVARRHDLKLIVTSATMDSSKF 694
Query: 746 SDFFGSVPIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDE 805
+ FFG+VP F IPGRTFPV+ ++SK CEDYVE+AVKQA+ +H+T GD+LIFM GQ++
Sbjct: 695 ATFFGNVPTFTIPGRTFPVDVMFSKNTCEDYVESAVKQALQVHLTPNEGDMLIFMPGQED 754
Query: 806 IEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNI 865
IE C L+ER+ ++ ++ P L ILPIYSQLP+DLQAKIF+K+ +G RKC+VATNI
Sbjct: 755 IEVTCEVLEERLAEIDNA-----PALSILPIYSQLPSDLQAKIFQKSSDGLRKCVVATNI 809
Query: 866 AETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYR 925
AETSLTVDGI YVID+GY K+KVYNP++GMDALQ++P+S YR
Sbjct: 810 AETSLTVDGIIYVIDSGYCKLKVYNPRIGMDALQIYPISQANANQRSGRAGRTGPGQAYR 869
Query: 926 LYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQL 985
LYT+ Y +E+L VPEIQRTNL N V F FMDPPPQ+NILNS+YQL
Sbjct: 870 LYTQRQYKDELLALTVPEIQRTNLANTVLLLKSLGVVDLLQFHFMDPPPQDNILNSLYQL 929
Query: 986 WVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRP 1045
W+LGAL++ GALT LG +M EFPLDPP +ML++ ++GC EVL IVSMLSVPS+F+RP
Sbjct: 930 WILGALDHTGALTTLGRQMAEFPLDPPQCQMLIVACRMGCSAEVLIIVSMLSVPSIFYRP 989
Query: 1046 KDRAEESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQ 1105
K R +E+D REKF ESDHLT L VYQQW+++ Y WC EH++H+K++RK REVR Q
Sbjct: 990 KGREDEADGVREKFQRPESDHLTYLNVYQQWRQNNYSSTWCNEHFIHIKAMRKVREVRQQ 1049
Query: 1106 LLDILKTLKIPLTSSGHDFDVVRKAICSAYFHNAARLKGVGEYINCRNGMPCHLHPSSAI 1165
L DI+ + + S G D+D+VRK ICSAYF+ AARLKG+GEY+N R GMPCHLHP+SA+
Sbjct: 1050 LKDIMTQQNLSVISCGIDWDIVRKCICSAYFYQAARLKGIGEYVNLRTGMPCHLHPTSAL 1109
Query: 1166 YGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFFSVKDSDTSMLEHKKKQKE 1225
YGLG TP+YVVYHELI+T KEYMQCATAV+ WL+ELGPMFFSVK+S S E KK+ E
Sbjct: 1110 YGLGTTPDYVVYHELIMTAKEYMQCATAVDGYWLAELGPMFFSVKESGRSGREKKKQAAE 1169
Query: 1226 SKTAMEEEMENLRKIQADXXXXXXXXXXXXXXXXXQQVSMPGWRQGSTTYLRPKKFGL 1283
MEE+M L+ Q+++ PG +T P + GL
Sbjct: 1170 HLKEMEEQM--LKAQHEMEERKQQAAEREEQLATKQEIATPG---NATPRRTPARIGL 1222
>DICTYBASE|DDB_G0285843 [details] [associations]
symbol:helD "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 dictyBase:DDB_G0285843 GO:GO:0005524
GenomeReviews:CM000153_GR GO:GO:0005681 GO:GO:0003676
EMBL:AAFI02000082 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
KO:K12815 RefSeq:XP_638016.1 EnsemblProtists:DDB0191460
GeneID:8625367 KEGG:ddi:DDB_G0285843 InParanoid:Q54MH4
ProtClustDB:CLSZ2846702 Uniprot:Q54MH4
Length = 1387
Score = 2621 (927.7 bits), Expect = 1.3e-272, P = 1.3e-272
Identities = 511/934 (54%), Positives = 677/934 (72%)
Query: 323 TFSRESSQSFEDGVADETYSEEHNYEITESMRL-EMEYNS---DRAWYDREEGTT-MFDT 377
T R S ++ + ++N + L E EY DR +YD +EG +FD+
Sbjct: 385 TPQRTPSHNYNSWSGRNNQNNQNNNNNNKKPHLKEEEYEEEEFDRGYYDADEGEGGVFDS 444
Query: 378 DSS-SFILGDDASYQKKEVELAKRLVRKDGSRMSLAQSKKLSQITADNHQWEERQLLRSG 436
++ S LGD+ ++K E E + +K + K +Q+ DN +WE +L++SG
Sbjct: 445 SNADSVFLGDEKKFKKMEEEFTRSQKKK--------VTAKQNQMNEDNSRWETNRLMQSG 496
Query: 437 AVRGTELSTE-FDDEEEHKVILLVHDTKPPFLDGRIVFTKQAEPVMPIKDPTSDMAIISR 495
+ E+ + +++E++V LLVH+T PPFLDG V TKQ V +KDPTSDMA+ISR
Sbjct: 497 VILQNEIDLDHLQEDDENRVNLLVHNTIPPFLDGHQVLTKQQRAVQTVKDPTSDMAVISR 556
Query: 496 KGSALVREIREKQTQNKSRQRFWELAGSQMGNILGVK----KTAEQVDADTAVVGEQ--- 548
KGSAL++E REK+ + KS+++ WEL G+ +G I+G+K K EQ A+ GEQ
Sbjct: 557 KGSALMKEFREKRDRIKSQKKVWELGGTAIGKIMGIKSEDEKEKEQQLANGGGGGEQIDK 616
Query: 549 --GEI-DFREDAKFSQHM---KKGEAVSDFAKSKTLAEQRQYLPIFSVRDELLQVIRENQ 602
GE+ +++ ++F+ H+ K E S+F+K+KT+ EQR++LPIF R++L+++IREN
Sbjct: 617 ETGEVLNYKAQSQFASHLTPNKPTEGSSEFSKTKTIKEQREFLPIFGCRNDLMKIIRENN 676
Query: 603 XXXXXGETGSGKTTQLTQYLLEDGYTTNGIVGCTQPRRVAAMSVAKRVSEEMDTELGDKV 662
GETGSGKTTQL QYL EDGY+ G +GCTQPRRVAA+SVAKRVSEEM LG++V
Sbjct: 677 VIIIVGETGSGKTTQLVQYLYEDGYSKFGKIGCTQPRRVAAVSVAKRVSEEMSVTLGNEV 736
Query: 663 GYAIRFEDVTGPSTLIKYMTDGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLFGILK 722
GY+IRFED T T IKYMTDG+LLRE+ D +LDKY I+MDEAHERSL+TDVLFGILK
Sbjct: 737 GYSIRFEDCTSNETAIKYMTDGILLRESFNDPNLDKYSAIIMDEAHERSLNTDVLFGILK 796
Query: 723 KVVARRRDFKLIVTSATLNAQKFSDFFGSVPIFHIPGRTFPVNTLYSKTPCEDYVEAAVK 782
KV++RR D KLIVTSAT++++KFS FFG VP+F IPGRTFPV+ L+SKTPCEDYV++AVK
Sbjct: 797 KVMSRRYDMKLIVTSATMDSKKFSMFFGDVPVFTIPGRTFPVDVLWSKTPCEDYVDSAVK 856
Query: 783 QAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPA 842
Q ++IH+T GDIL+FMTGQ++IE C ++ER++QL + P L +LPIYSQLP+
Sbjct: 857 QILSIHVTQGVGDILVFMTGQEDIETTCATVEERIKQL----GPQAPPLTLLPIYSQLPS 912
Query: 843 DLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFP 902
D+QAKIFEKA G+RKCI+ATNIAETSLTVDGI YVIDTGY K+KVYNP++GMD+LQV P
Sbjct: 913 DMQAKIFEKADNGSRKCIIATNIAETSLTVDGILYVIDTGYCKLKVYNPRVGMDSLQVTP 972
Query: 903 VSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXX 962
+S CYRLYTESA+ E++ + +PEIQRTNLGNVV
Sbjct: 973 ISKANANQRSGRAGRTGPGRCYRLYTESAFKYELMDNNIPEIQRTNLGNVVLNLKSMGVK 1032
Query: 963 XXXXFDFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQ 1022
FDFMDPPPQ+NILNSMYQLWVLGAL++ G +T LG +M EFPLDPPL+KM+++ EQ
Sbjct: 1033 NLLDFDFMDPPPQDNILNSMYQLWVLGALDDQGQITPLGKRMSEFPLDPPLSKMVIVAEQ 1092
Query: 1023 LGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAAREKFFVQESDHLTLLYVYQQWKEHQYR 1082
LGC +++TIVSMLS+PSVF+RPK EESDA+REKFFV ESDHLTLL+VYQQWK + Y
Sbjct: 1093 LGCGQDIVTIVSMLSMPSVFYRPKGAEEESDASREKFFVPESDHLTLLHVYQQWKINNYS 1152
Query: 1083 GDWCEEHYLHVKSLRKAREVRSQLLDILKTLKIPLTSSGHDFDVVRKAICSAYFHNAARL 1142
WC EHY+H+K++RK REVR QLLDI+ + + S G ++D++RKAI S+YFH++A++
Sbjct: 1153 SQWCAEHYIHIKAMRKVREVRGQLLDIMVQHDMKVESCGSNWDIIRKAITSSYFHHSAKI 1212
Query: 1143 KGVGEYINCRNGMPCHLHPSSAIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSEL 1202
KG+GEY+N RNGMPC LHP+SA+YGLGY P+Y+VYHEL++T+KEYMQ TAV+P WL+E+
Sbjct: 1213 KGIGEYVNMRNGMPCFLHPTSALYGLGYAPDYIVYHELVMTSKEYMQIVTAVDPNWLAEM 1272
Query: 1203 GPMFFSVKDSDTSMLEHKKKQKESKTAMEEEMEN 1236
GPMFFS+K S + + K+K K + + + N
Sbjct: 1273 GPMFFSIKKS---LKDKKRKLDPIKDKINDNINN 1303
Score = 368 (134.6 bits), Expect = 1.4e-29, P = 1.4e-29
Identities = 148/582 (25%), Positives = 251/582 (43%)
Query: 42 PGAKAQSGLGVRAVEKGGGSQIDDGFKVPRVASVAASID-----EEEKSESSGIDEVVSN 96
P A+ G G+ + + + D+ FK+P+V +D + E+ E E++
Sbjct: 104 PLAETMKG-GL--ITRKNSTNNDEQFKIPQVKKSVLGLDILAKEKREEQEEKRRKELLDR 160
Query: 97 ATNGKRSHASRRYRETSARDITDAENPMAVGRAGETAGTHRSNEHAYVEXXXXXXXXXXX 156
N S+ + Y + D + + P R ++ RSN++
Sbjct: 161 FNNDDDSN-NDNYNDN---DESSFKKPEKHYRQIKSTPI-RSNDYERNSSSSSSSSYDRR 215
Query: 157 XXXXXRHD---RDDRGSERKYLKDDTRSESRGPSRRDNY--DSKGRYRGREARD--RDEP 209
D RDDR S R + D RS S +RRD+Y D K D RD+
Sbjct: 216 DDRSSNRDDYRRDDRSSNRDDYRRDDRSGSS--NRRDDYRRDDKSSSSSSNRDDYRRDDR 273
Query: 210 EYGGEYGRKRSKYDGTRRTPGRSDWDDGRWEWEDTPRREGYSNSSKRYQPSPSPMFVGAS 269
E ++ + RR G D++ +TP+R Y++ + + P +
Sbjct: 274 SSNREDYKRDDRSSSYRR--GE-DFNKN----SETPQRR-YNDQTPSRDSNRDPSY---K 322
Query: 270 PDARLVSPLSTPRSN----GYAASPWD----HISPSPVPIRAXXXXXXXXXXXXXXXXHQ 321
D R ++ + + G P+D + P R
Sbjct: 323 RDDRSINRNDYRKGDIDRGGGDNRPFDTPQRNRDNDQTPSRYNQQQKQQQQNNRNNNNRP 382
Query: 322 L-TFSRESSQSFEDGVADETYSEEHNYEITESMRL-EMEYNS---DRAWYDREEGTTMFD 376
T R S ++ + ++N + L E EY DR +YD +EG
Sbjct: 383 YDTPQRTPSHNYNSWSGRNNQNNQNNNNNNKKPHLKEEEYEEEEFDRGYYDADEGEGGV- 441
Query: 377 TDSSSFILGDDASY--QKKEVELAKRLVRKDGSRMSLAQSKKLSQITADNHQWEERQLLR 434
DSS+ D +KK ++ + R +++ Q+ Q+ DN +WE +L++
Sbjct: 442 FDSSN---ADSVFLGDEKKFKKMEEEFTRSQKKKVTAKQN----QMNEDNSRWETNRLMQ 494
Query: 435 SGAVRGTELSTE-FDDEEEHKVILLVHDTKPPFLDGRIVFTKQAEPVMPIKDPTSDMAII 493
SG + E+ + +++E++V LLVH+T PPFLDG V TKQ V +KDPTSDMA+I
Sbjct: 495 SGVILQNEIDLDHLQEDDENRVNLLVHNTIPPFLDGHQVLTKQQRAVQTVKDPTSDMAVI 554
Query: 494 SRKGSALVREIREKQTQNKSRQRFWELAGSQMGNILGVKKTAE-QVDADTAVVGEQGE-I 551
SRKGSAL++E REK+ + KS+++ WEL G+ +G I+G+K E + + A G GE I
Sbjct: 555 SRKGSALMKEFREKRDRIKSQKKVWELGGTAIGKIMGIKSEDEKEKEQQLANGGGGGEQI 614
Query: 552 DFREDAKFSQHMKKGEAVSDFAKSKTLAEQRQYLPIFSVRDE 593
D +E + + + + S +K ++ +++++
Sbjct: 615 D-KETGEVLNYKAQSQFASHLTPNKPTEGSSEFSKTKTIKEQ 655
>WB|WBGene00003389 [details] [associations]
symbol:mog-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0042127 "regulation of cell proliferation"
evidence=IMP] [GO:0040020 "regulation of meiosis" evidence=IMP]
[GO:0007281 "germ cell development" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0006898 GO:GO:0002119
GO:GO:0008380 GO:GO:0006397 GO:GO:0010171 GO:GO:0003676
GO:GO:0042127 GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0040022 GO:GO:0008026 HOGENOM:HOG000175261
EMBL:Z29560 KO:K12815 EMBL:AF120269 PIR:F88570 PIR:S41025
RefSeq:NP_499212.1 UniGene:Cel.5743 ProteinModelPortal:P34498
SMR:P34498 IntAct:P34498 STRING:P34498 PaxDb:P34498 PRIDE:P34498
EnsemblMetazoa:K03H1.2 GeneID:176409 KEGG:cel:CELE_K03H1.2
UCSC:K03H1.2.1 CTD:176409 WormBase:K03H1.2
GeneTree:ENSGT00700000104877 InParanoid:P34498 OMA:PSRSTWE
NextBio:892452 Uniprot:P34498
Length = 1131
Score = 2569 (909.4 bits), Expect = 2.6e-272, Sum P(2) = 2.6e-272
Identities = 507/913 (55%), Positives = 656/913 (71%)
Query: 333 EDGVAD--ETYSEEHNYEITESMRLEMEY-NSDRAWYDREEGTTMFDTDSSSFILGDDAS 389
ED V E +E ++ E + E E N DR WYD E G FD + + F D
Sbjct: 198 EDSVRSVKEEKAEPTFHDDEERAQWEEEQKNLDREWYDNE-GA--FDDEYNPFNKVSDEF 254
Query: 390 YQKKEVELAKRLVRKDGSRMSLAQSKKLSQITADNHQWEERQLLRSGAVR-GTELSTEFD 448
+K+E + ++ + R+++ Q I +N WE +L RSG V ELS+ F+
Sbjct: 255 VEKREKQWQEKTQKP---RLTVKQQA----IKRENELWENNRLHRSGVVAMADELSSIFE 307
Query: 449 DE-EEHKVILLVHDTKPPFLDGRIVFTKQAEPVMPIKDPTSDMAIISRKGSALVREIREK 507
DE +E++V +LV + PPFLDGRIVFTKQA+P++P+ D T DMA+ + +GS VR+ RE
Sbjct: 308 DETDENRVTILVQNIVPPFLDGRIVFTKQAQPIIPVVDTTCDMAVSAARGSVAVRKRREV 367
Query: 508 QTQNKSRQRFWELAGSQMGNILGVKKTAEQVDADTAVVGEQGEIDFREDAKFSQHMKKGE 567
+ + K++ + WELAGS++GN++GVK E+ D +TA + +++E +F+ HMK E
Sbjct: 368 EDRKKAQDKHWELAGSKLGNLMGVK---EKKD-ETADPEDDDSGNYKESHQFASHMKDNE 423
Query: 568 AVSDFAKSKTLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGY 627
AVSDFA K++ +QR+YLP+F+ R +++ VIREN GETGSGKTTQL QYLLEDG+
Sbjct: 424 AVSDFAMEKSIKQQREYLPVFACRQKMMNVIRENNVVIIVGETGSGKTTQLAQYLLEDGF 483
Query: 628 TTNGIVGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLL 687
+G++GCTQPRRVAAMSVA+RV++EM +LG VGYAIRFED T T+IKYMTDG+LL
Sbjct: 484 GDSGLIGCTQPRRVAAMSVARRVADEMGVDLGQDVGYAIRFEDCTSEKTIIKYMTDGILL 543
Query: 688 RETLKDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSD 747
RE L D LD+Y I+MDEAHERSL+TDVLFG+L++V+A+R D KLIVTSAT++A KF+D
Sbjct: 544 RECLGDGSLDQYSAIIMDEAHERSLNTDVLFGLLREVIAKRADLKLIVTSATMDADKFAD 603
Query: 748 FFG-SVPIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEI 806
FFG + P F IPGRTFPV +++TP EDYV+AAVKQA+TIH+ GDILIFM GQ++I
Sbjct: 604 FFGGNCPTFTIPGRTFPVELFHARTPVEDYVDAAVKQAVTIHLGGMDGDILIFMPGQEDI 663
Query: 807 EAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIA 866
E C +KE++ +L E P L +LPIYSQLP+DLQAKIF++A G RK IVATNIA
Sbjct: 664 ECTCEMIKEKLGEL-----DEAPPLAVLPIYSQLPSDLQAKIFQRAPGGMRKAIVATNIA 718
Query: 867 ETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRL 926
ETSLTVDGI +VID G+ KMKVYNP++GMDAL +FPVS CYRL
Sbjct: 719 ETSLTVDGILFVIDPGFCKMKVYNPRIGMDALSIFPVSQASANQRTGRAGRTGPGQCYRL 778
Query: 927 YTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLW 986
YTE + +E+L S VPEIQRTNL NVV F FMD PPQ+N+LNSMYQLW
Sbjct: 779 YTERQFKDELLKSTVPEIQRTNLANVVLLLKSLGVDDLLKFHFMDAPPQDNMLNSMYQLW 838
Query: 987 VLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPK 1046
LGAL+N G LT +G KMVEFPLDP L+KML+M ++GC DEVLTIVSMLSVP++FFRPK
Sbjct: 839 TLGALDNTGQLTPMGRKMVEFPLDPTLSKMLIMSAEMGCSDEVLTIVSMLSVPAIFFRPK 898
Query: 1047 DRAEESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQL 1106
R EE+DA +EKF V ESDHLT L VY QW+ H+Y WC ++YLHVK+L+K REVR+QL
Sbjct: 899 GREEEADAKKEKFQVPESDHLTFLNVYIQWRTHKYSAKWCADNYLHVKALKKVREVRAQL 958
Query: 1107 LDILKTLKIPLTSSGHDFDVVRKAICSAYFHNAARLKGVGEYINCRNGMPCHLHPSSAIY 1166
+I++ LK+PL S+G ++D+VRK ICSAYFHNAARLKG+GEY+N R G+PC LHP+SA++
Sbjct: 959 KEIMQDLKLPLISNGSEWDIVRKCICSAYFHNAARLKGIGEYVNVRTGIPCFLHPTSALF 1018
Query: 1167 GLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFFSVKDSDTSMLEHKKKQKES 1226
G+G+ P+YVVYHELI+T KEYMQC TAV+ WL+ELGPMF+S+K+S S E K + +
Sbjct: 1019 GMGFMPDYVVYHELIMTAKEYMQCVTAVDAIWLAELGPMFYSIKESKQSRKELKMESVRT 1078
Query: 1227 KTAMEEEMENLRK 1239
ME EM +K
Sbjct: 1079 VETMEAEMREAQK 1091
Score = 2543 (900.2 bits), Expect = 1.4e-269, Sum P(2) = 1.4e-269
Identities = 536/1063 (50%), Positives = 707/1063 (66%)
Query: 195 KGRYRGREARDRDEPEYGGEYGRKRSKYDGTRRTPGRSDWDD--GRWEWEDTPRREGYSN 252
KG + E + RD + G +Y +S+ D RR RS+ + R W+D R G +
Sbjct: 73 KGIEKVHE-KHRDRDDRGMKY---KSRDDDRRRDRDRSERREPSSRRGWKD---RSG--D 123
Query: 253 SSKRYQPSPSPMFVGASPDARLVSPLSTPRSNGYAASPWDHISPSPVPIRAXXXXXXXXX 312
+ R++ +P + D R S S R++ WD +P R
Sbjct: 124 QTPRFKVPDTPSRMSWDQDDREGS--SRKRNS------WDMPTPRGERDRKRYMDSERSI 175
Query: 313 XXX--XXXXHQLTFSRESSQSFEDGVAD--ETYSEEHNYEITESMRLEMEY-NSDRAWYD 367
++ R + ED V E +E ++ E + E E N DR WYD
Sbjct: 176 SSAWRSERRNRDDEKRRRHRKPEDSVRSVKEEKAEPTFHDDEERAQWEEEQKNLDREWYD 235
Query: 368 REEGTTMFDTDSSSFILGDDASYQKKEVELAKRLVRKDGSRMSLAQSKKLSQITADNHQW 427
E G FD + + F D +K+E + ++ + R+++ Q I +N W
Sbjct: 236 NE-GA--FDDEYNPFNKVSDEFVEKREKQWQEKTQKP---RLTVKQQA----IKRENELW 285
Query: 428 EERQLLRSGAVR-GTELSTEFDDE-EEHKVILLVHDTKPPFLDGRIVFTKQAEPVMPIKD 485
E +L RSG V ELS+ F+DE +E++V +LV + PPFLDGRIVFTKQA+P++P+ D
Sbjct: 286 ENNRLHRSGVVAMADELSSIFEDETDENRVTILVQNIVPPFLDGRIVFTKQAQPIIPVVD 345
Query: 486 PTSDMAIISRKGSALVREIREKQTQNKSRQRFWELAGSQMGNILGVKKTAEQVDADTAVV 545
T DMA+ + +GS VR+ RE + + K++ + WELAGS++GN++GVK E+ D +TA
Sbjct: 346 TTCDMAVSAARGSVAVRKRREVEDRKKAQDKHWELAGSKLGNLMGVK---EKKD-ETADP 401
Query: 546 GEQGEIDFREDAKFSQHMKKGEAVSDFAKSKTLAEQRQYLPIFSVRDELLQVIRENQXXX 605
+ +++E +F+ HMK EAVSDFA K++ +QR+YLP+F+ R +++ VIREN
Sbjct: 402 EDDDSGNYKESHQFASHMKDNEAVSDFAMEKSIKQQREYLPVFACRQKMMNVIRENNVVI 461
Query: 606 XXGETGSGKTTQLTQYLLEDGYTTNGIVGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYA 665
GETGSGKTTQL QYLLEDG+ +G++GCTQPRRVAAMSVA+RV++EM +LG VGYA
Sbjct: 462 IVGETGSGKTTQLAQYLLEDGFGDSGLIGCTQPRRVAAMSVARRVADEMGVDLGQDVGYA 521
Query: 666 IRFEDVTGPSTLIKYMTDGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVV 725
IRFED T T+IKYMTDG+LLRE L D LD+Y I+MDEAHERSL+TDVLFG+L++V+
Sbjct: 522 IRFEDCTSEKTIIKYMTDGILLRECLGDGSLDQYSAIIMDEAHERSLNTDVLFGLLREVI 581
Query: 726 ARRRDFKLIVTSATLNAQKFSDFFG-SVPIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQA 784
A+R D KLIVTSAT++A KF+DFFG + P F IPGRTFPV +++TP EDYV+AAVKQA
Sbjct: 582 AKRADLKLIVTSATMDADKFADFFGGNCPTFTIPGRTFPVELFHARTPVEDYVDAAVKQA 641
Query: 785 MTIHITSPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADL 844
+TIH+ GDILIFM GQ++IE C +KE++ +L E P L +LPIYSQLP+DL
Sbjct: 642 VTIHLGGMDGDILIFMPGQEDIECTCEMIKEKLGEL-----DEAPPLAVLPIYSQLPSDL 696
Query: 845 QAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVS 904
QAKIF++A G RK IVATNIAETSLTVDGI +VID G+ KMKVYNP++GMDAL +FPVS
Sbjct: 697 QAKIFQRAPGGMRKAIVATNIAETSLTVDGILFVIDPGFCKMKVYNPRIGMDALSIFPVS 756
Query: 905 XXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXX 964
CYRLYTE + +E+L S VPEIQRTNL NVV
Sbjct: 757 QASANQRTGRAGRTGPGQCYRLYTERQFKDELLKSTVPEIQRTNLANVVLLLKSLGVDDL 816
Query: 965 XXFDFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLG 1024
F FMD PPQ+N+LNSMYQLW LGAL+N G LT +G KMVEFPLDP L+KML+M ++G
Sbjct: 817 LKFHFMDAPPQDNMLNSMYQLWTLGALDNTGQLTPMGRKMVEFPLDPTLSKMLIMSAEMG 876
Query: 1025 CLDEVLTIVSMLSVPSVFFRPKDRAEESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGD 1084
C DEVLTIVSMLSVP++FFRPK R EE+DA +EKF V ESDHLT L VY QW+ H+Y
Sbjct: 877 CSDEVLTIVSMLSVPAIFFRPKGREEEADAKKEKFQVPESDHLTFLNVYIQWRTHKYSAK 936
Query: 1085 WCEEHYLHVKSLRKAREVRSQLLDILKTLKIPLTSSGHDFDVVRKAICSAYFHNAARLKG 1144
WC ++YLHVK+L+K REVR+QL +I++ LK+PL S+G ++D+VRK ICSAYFHNAARLKG
Sbjct: 937 WCADNYLHVKALKKVREVRAQLKEIMQDLKLPLISNGSEWDIVRKCICSAYFHNAARLKG 996
Query: 1145 VGEYINCRNGMPCHLHPSSAIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGP 1204
+GEY+N R G+PC LHP+SA++G+G+ P+YVVYHELI+T KEYMQC TAV+ WL+ELGP
Sbjct: 997 IGEYVNVRTGIPCFLHPTSALFGMGFMPDYVVYHELIMTAKEYMQCVTAVDAIWLAELGP 1056
Query: 1205 MFFSVKDS---------------DTSMLEHKKKQKESKTAMEE 1232
MF+S+K+S +T E ++ QKE + EE
Sbjct: 1057 MFYSIKESKQSRKELKMESVRTVETMEAEMREAQKEMERRKEE 1099
Score = 73 (30.8 bits), Expect = 2.6e-272, Sum P(2) = 2.6e-272
Identities = 34/101 (33%), Positives = 44/101 (43%)
Query: 162 RH-DRDDRGSERKYLKDDTRSESRGPSRRDNYDSKGRYRGREARDRDE-PEYGGEYGRKR 219
+H DRDDRG + K +DD R R S R S+ RG + R D+ P + R
Sbjct: 81 KHRDRDDRGMKYKS-RDDDRRRDRDRSERREPSSR---RGWKDRSGDQTPRFKVPDTPSR 136
Query: 220 SKYDGTRRTPGRSDWDDGRWEWEDTPRREGYSNSSKRYQPS 260
+D R G S + W+ TPR E KRY S
Sbjct: 137 MSWDQDDRE-GSSRKRNS-WDMP-TPRGE---RDRKRYMDS 171
Score = 70 (29.7 bits), Expect = 5.3e-272, Sum P(2) = 5.3e-272
Identities = 41/163 (25%), Positives = 61/163 (37%)
Query: 89 GIDEVVSNATNGKRSHASRRYRETSARDITDAENPMAVGRAGETAGTHRSNEHAYVEXXX 148
G+D + S KR HA +R + R +T++ + + E HR + ++
Sbjct: 43 GLDRLAST----KREHARKRLEDDDDRGVTESVRK-GIEKVHEK---HRDRDDRGMKYKS 94
Query: 149 XXXXXXXXXXXXXRHDRDDRGSERKYLKDDT-RSESRG-PSRR--DNYDSKGRYRGREAR 204
R + R + D T R + PSR D D +G R R +
Sbjct: 95 RDDDRRRDRDRSERREPSSRRGWKDRSGDQTPRFKVPDTPSRMSWDQDDREGSSRKRNSW 154
Query: 205 DRDEPEYGGEYGRKRSKYDGTRRTPGRSDWDDGRWEWEDTPRR 247
D P GE RKR Y + R+ S W R +D RR
Sbjct: 155 DMPTPR--GERDRKR--YMDSERSIS-SAWRSERRNRDDEKRR 192
Score = 52 (23.4 bits), Expect = 4.3e-270, Sum P(2) = 4.3e-270
Identities = 23/86 (26%), Positives = 39/86 (45%)
Query: 168 RGS-ERKYLKDDTRS-ESRGPSRRDNYDSKGRYRGREARD--------RDEPEYGGEYGR 217
RG +RK D RS S S R N D + R R R+ D + EP + +
Sbjct: 160 RGERDRKRYMDSERSISSAWRSERRNRDDEKRRRHRKPEDSVRSVKEEKAEPTFHDD--E 217
Query: 218 KRSKYDGTRRTPGRSDWDDGRWEWED 243
+R++++ ++ R +W D ++D
Sbjct: 218 ERAQWEEEQKNLDR-EWYDNEGAFDD 242
>UNIPROTKB|P34498 [details] [associations]
symbol:mog-1 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-1" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0009792 GO:GO:0006898
GO:GO:0002119 GO:GO:0008380 GO:GO:0006397 GO:GO:0010171
GO:GO:0003676 GO:GO:0042127 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0040022 GO:GO:0008026
HOGENOM:HOG000175261 EMBL:Z29560 KO:K12815 EMBL:AF120269 PIR:F88570
PIR:S41025 RefSeq:NP_499212.1 UniGene:Cel.5743
ProteinModelPortal:P34498 SMR:P34498 IntAct:P34498 STRING:P34498
PaxDb:P34498 PRIDE:P34498 EnsemblMetazoa:K03H1.2 GeneID:176409
KEGG:cel:CELE_K03H1.2 UCSC:K03H1.2.1 CTD:176409 WormBase:K03H1.2
GeneTree:ENSGT00700000104877 InParanoid:P34498 OMA:PSRSTWE
NextBio:892452 Uniprot:P34498
Length = 1131
Score = 2569 (909.4 bits), Expect = 2.6e-272, Sum P(2) = 2.6e-272
Identities = 507/913 (55%), Positives = 656/913 (71%)
Query: 333 EDGVAD--ETYSEEHNYEITESMRLEMEY-NSDRAWYDREEGTTMFDTDSSSFILGDDAS 389
ED V E +E ++ E + E E N DR WYD E G FD + + F D
Sbjct: 198 EDSVRSVKEEKAEPTFHDDEERAQWEEEQKNLDREWYDNE-GA--FDDEYNPFNKVSDEF 254
Query: 390 YQKKEVELAKRLVRKDGSRMSLAQSKKLSQITADNHQWEERQLLRSGAVR-GTELSTEFD 448
+K+E + ++ + R+++ Q I +N WE +L RSG V ELS+ F+
Sbjct: 255 VEKREKQWQEKTQKP---RLTVKQQA----IKRENELWENNRLHRSGVVAMADELSSIFE 307
Query: 449 DE-EEHKVILLVHDTKPPFLDGRIVFTKQAEPVMPIKDPTSDMAIISRKGSALVREIREK 507
DE +E++V +LV + PPFLDGRIVFTKQA+P++P+ D T DMA+ + +GS VR+ RE
Sbjct: 308 DETDENRVTILVQNIVPPFLDGRIVFTKQAQPIIPVVDTTCDMAVSAARGSVAVRKRREV 367
Query: 508 QTQNKSRQRFWELAGSQMGNILGVKKTAEQVDADTAVVGEQGEIDFREDAKFSQHMKKGE 567
+ + K++ + WELAGS++GN++GVK E+ D +TA + +++E +F+ HMK E
Sbjct: 368 EDRKKAQDKHWELAGSKLGNLMGVK---EKKD-ETADPEDDDSGNYKESHQFASHMKDNE 423
Query: 568 AVSDFAKSKTLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGY 627
AVSDFA K++ +QR+YLP+F+ R +++ VIREN GETGSGKTTQL QYLLEDG+
Sbjct: 424 AVSDFAMEKSIKQQREYLPVFACRQKMMNVIRENNVVIIVGETGSGKTTQLAQYLLEDGF 483
Query: 628 TTNGIVGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLL 687
+G++GCTQPRRVAAMSVA+RV++EM +LG VGYAIRFED T T+IKYMTDG+LL
Sbjct: 484 GDSGLIGCTQPRRVAAMSVARRVADEMGVDLGQDVGYAIRFEDCTSEKTIIKYMTDGILL 543
Query: 688 RETLKDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSD 747
RE L D LD+Y I+MDEAHERSL+TDVLFG+L++V+A+R D KLIVTSAT++A KF+D
Sbjct: 544 RECLGDGSLDQYSAIIMDEAHERSLNTDVLFGLLREVIAKRADLKLIVTSATMDADKFAD 603
Query: 748 FFG-SVPIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEI 806
FFG + P F IPGRTFPV +++TP EDYV+AAVKQA+TIH+ GDILIFM GQ++I
Sbjct: 604 FFGGNCPTFTIPGRTFPVELFHARTPVEDYVDAAVKQAVTIHLGGMDGDILIFMPGQEDI 663
Query: 807 EAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIA 866
E C +KE++ +L E P L +LPIYSQLP+DLQAKIF++A G RK IVATNIA
Sbjct: 664 ECTCEMIKEKLGEL-----DEAPPLAVLPIYSQLPSDLQAKIFQRAPGGMRKAIVATNIA 718
Query: 867 ETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRL 926
ETSLTVDGI +VID G+ KMKVYNP++GMDAL +FPVS CYRL
Sbjct: 719 ETSLTVDGILFVIDPGFCKMKVYNPRIGMDALSIFPVSQASANQRTGRAGRTGPGQCYRL 778
Query: 927 YTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLW 986
YTE + +E+L S VPEIQRTNL NVV F FMD PPQ+N+LNSMYQLW
Sbjct: 779 YTERQFKDELLKSTVPEIQRTNLANVVLLLKSLGVDDLLKFHFMDAPPQDNMLNSMYQLW 838
Query: 987 VLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPK 1046
LGAL+N G LT +G KMVEFPLDP L+KML+M ++GC DEVLTIVSMLSVP++FFRPK
Sbjct: 839 TLGALDNTGQLTPMGRKMVEFPLDPTLSKMLIMSAEMGCSDEVLTIVSMLSVPAIFFRPK 898
Query: 1047 DRAEESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQL 1106
R EE+DA +EKF V ESDHLT L VY QW+ H+Y WC ++YLHVK+L+K REVR+QL
Sbjct: 899 GREEEADAKKEKFQVPESDHLTFLNVYIQWRTHKYSAKWCADNYLHVKALKKVREVRAQL 958
Query: 1107 LDILKTLKIPLTSSGHDFDVVRKAICSAYFHNAARLKGVGEYINCRNGMPCHLHPSSAIY 1166
+I++ LK+PL S+G ++D+VRK ICSAYFHNAARLKG+GEY+N R G+PC LHP+SA++
Sbjct: 959 KEIMQDLKLPLISNGSEWDIVRKCICSAYFHNAARLKGIGEYVNVRTGIPCFLHPTSALF 1018
Query: 1167 GLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFFSVKDSDTSMLEHKKKQKES 1226
G+G+ P+YVVYHELI+T KEYMQC TAV+ WL+ELGPMF+S+K+S S E K + +
Sbjct: 1019 GMGFMPDYVVYHELIMTAKEYMQCVTAVDAIWLAELGPMFYSIKESKQSRKELKMESVRT 1078
Query: 1227 KTAMEEEMENLRK 1239
ME EM +K
Sbjct: 1079 VETMEAEMREAQK 1091
Score = 2543 (900.2 bits), Expect = 1.4e-269, Sum P(2) = 1.4e-269
Identities = 536/1063 (50%), Positives = 707/1063 (66%)
Query: 195 KGRYRGREARDRDEPEYGGEYGRKRSKYDGTRRTPGRSDWDD--GRWEWEDTPRREGYSN 252
KG + E + RD + G +Y +S+ D RR RS+ + R W+D R G +
Sbjct: 73 KGIEKVHE-KHRDRDDRGMKY---KSRDDDRRRDRDRSERREPSSRRGWKD---RSG--D 123
Query: 253 SSKRYQPSPSPMFVGASPDARLVSPLSTPRSNGYAASPWDHISPSPVPIRAXXXXXXXXX 312
+ R++ +P + D R S S R++ WD +P R
Sbjct: 124 QTPRFKVPDTPSRMSWDQDDREGS--SRKRNS------WDMPTPRGERDRKRYMDSERSI 175
Query: 313 XXX--XXXXHQLTFSRESSQSFEDGVAD--ETYSEEHNYEITESMRLEMEY-NSDRAWYD 367
++ R + ED V E +E ++ E + E E N DR WYD
Sbjct: 176 SSAWRSERRNRDDEKRRRHRKPEDSVRSVKEEKAEPTFHDDEERAQWEEEQKNLDREWYD 235
Query: 368 REEGTTMFDTDSSSFILGDDASYQKKEVELAKRLVRKDGSRMSLAQSKKLSQITADNHQW 427
E G FD + + F D +K+E + ++ + R+++ Q I +N W
Sbjct: 236 NE-GA--FDDEYNPFNKVSDEFVEKREKQWQEKTQKP---RLTVKQQA----IKRENELW 285
Query: 428 EERQLLRSGAVR-GTELSTEFDDE-EEHKVILLVHDTKPPFLDGRIVFTKQAEPVMPIKD 485
E +L RSG V ELS+ F+DE +E++V +LV + PPFLDGRIVFTKQA+P++P+ D
Sbjct: 286 ENNRLHRSGVVAMADELSSIFEDETDENRVTILVQNIVPPFLDGRIVFTKQAQPIIPVVD 345
Query: 486 PTSDMAIISRKGSALVREIREKQTQNKSRQRFWELAGSQMGNILGVKKTAEQVDADTAVV 545
T DMA+ + +GS VR+ RE + + K++ + WELAGS++GN++GVK E+ D +TA
Sbjct: 346 TTCDMAVSAARGSVAVRKRREVEDRKKAQDKHWELAGSKLGNLMGVK---EKKD-ETADP 401
Query: 546 GEQGEIDFREDAKFSQHMKKGEAVSDFAKSKTLAEQRQYLPIFSVRDELLQVIRENQXXX 605
+ +++E +F+ HMK EAVSDFA K++ +QR+YLP+F+ R +++ VIREN
Sbjct: 402 EDDDSGNYKESHQFASHMKDNEAVSDFAMEKSIKQQREYLPVFACRQKMMNVIRENNVVI 461
Query: 606 XXGETGSGKTTQLTQYLLEDGYTTNGIVGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYA 665
GETGSGKTTQL QYLLEDG+ +G++GCTQPRRVAAMSVA+RV++EM +LG VGYA
Sbjct: 462 IVGETGSGKTTQLAQYLLEDGFGDSGLIGCTQPRRVAAMSVARRVADEMGVDLGQDVGYA 521
Query: 666 IRFEDVTGPSTLIKYMTDGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVV 725
IRFED T T+IKYMTDG+LLRE L D LD+Y I+MDEAHERSL+TDVLFG+L++V+
Sbjct: 522 IRFEDCTSEKTIIKYMTDGILLRECLGDGSLDQYSAIIMDEAHERSLNTDVLFGLLREVI 581
Query: 726 ARRRDFKLIVTSATLNAQKFSDFFG-SVPIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQA 784
A+R D KLIVTSAT++A KF+DFFG + P F IPGRTFPV +++TP EDYV+AAVKQA
Sbjct: 582 AKRADLKLIVTSATMDADKFADFFGGNCPTFTIPGRTFPVELFHARTPVEDYVDAAVKQA 641
Query: 785 MTIHITSPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADL 844
+TIH+ GDILIFM GQ++IE C +KE++ +L E P L +LPIYSQLP+DL
Sbjct: 642 VTIHLGGMDGDILIFMPGQEDIECTCEMIKEKLGEL-----DEAPPLAVLPIYSQLPSDL 696
Query: 845 QAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVS 904
QAKIF++A G RK IVATNIAETSLTVDGI +VID G+ KMKVYNP++GMDAL +FPVS
Sbjct: 697 QAKIFQRAPGGMRKAIVATNIAETSLTVDGILFVIDPGFCKMKVYNPRIGMDALSIFPVS 756
Query: 905 XXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXX 964
CYRLYTE + +E+L S VPEIQRTNL NVV
Sbjct: 757 QASANQRTGRAGRTGPGQCYRLYTERQFKDELLKSTVPEIQRTNLANVVLLLKSLGVDDL 816
Query: 965 XXFDFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLG 1024
F FMD PPQ+N+LNSMYQLW LGAL+N G LT +G KMVEFPLDP L+KML+M ++G
Sbjct: 817 LKFHFMDAPPQDNMLNSMYQLWTLGALDNTGQLTPMGRKMVEFPLDPTLSKMLIMSAEMG 876
Query: 1025 CLDEVLTIVSMLSVPSVFFRPKDRAEESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGD 1084
C DEVLTIVSMLSVP++FFRPK R EE+DA +EKF V ESDHLT L VY QW+ H+Y
Sbjct: 877 CSDEVLTIVSMLSVPAIFFRPKGREEEADAKKEKFQVPESDHLTFLNVYIQWRTHKYSAK 936
Query: 1085 WCEEHYLHVKSLRKAREVRSQLLDILKTLKIPLTSSGHDFDVVRKAICSAYFHNAARLKG 1144
WC ++YLHVK+L+K REVR+QL +I++ LK+PL S+G ++D+VRK ICSAYFHNAARLKG
Sbjct: 937 WCADNYLHVKALKKVREVRAQLKEIMQDLKLPLISNGSEWDIVRKCICSAYFHNAARLKG 996
Query: 1145 VGEYINCRNGMPCHLHPSSAIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGP 1204
+GEY+N R G+PC LHP+SA++G+G+ P+YVVYHELI+T KEYMQC TAV+ WL+ELGP
Sbjct: 997 IGEYVNVRTGIPCFLHPTSALFGMGFMPDYVVYHELIMTAKEYMQCVTAVDAIWLAELGP 1056
Query: 1205 MFFSVKDS---------------DTSMLEHKKKQKESKTAMEE 1232
MF+S+K+S +T E ++ QKE + EE
Sbjct: 1057 MFYSIKESKQSRKELKMESVRTVETMEAEMREAQKEMERRKEE 1099
Score = 73 (30.8 bits), Expect = 2.6e-272, Sum P(2) = 2.6e-272
Identities = 34/101 (33%), Positives = 44/101 (43%)
Query: 162 RH-DRDDRGSERKYLKDDTRSESRGPSRRDNYDSKGRYRGREARDRDE-PEYGGEYGRKR 219
+H DRDDRG + K +DD R R S R S+ RG + R D+ P + R
Sbjct: 81 KHRDRDDRGMKYKS-RDDDRRRDRDRSERREPSSR---RGWKDRSGDQTPRFKVPDTPSR 136
Query: 220 SKYDGTRRTPGRSDWDDGRWEWEDTPRREGYSNSSKRYQPS 260
+D R G S + W+ TPR E KRY S
Sbjct: 137 MSWDQDDRE-GSSRKRNS-WDMP-TPRGE---RDRKRYMDS 171
Score = 70 (29.7 bits), Expect = 5.3e-272, Sum P(2) = 5.3e-272
Identities = 41/163 (25%), Positives = 61/163 (37%)
Query: 89 GIDEVVSNATNGKRSHASRRYRETSARDITDAENPMAVGRAGETAGTHRSNEHAYVEXXX 148
G+D + S KR HA +R + R +T++ + + E HR + ++
Sbjct: 43 GLDRLAST----KREHARKRLEDDDDRGVTESVRK-GIEKVHEK---HRDRDDRGMKYKS 94
Query: 149 XXXXXXXXXXXXXRHDRDDRGSERKYLKDDT-RSESRG-PSRR--DNYDSKGRYRGREAR 204
R + R + D T R + PSR D D +G R R +
Sbjct: 95 RDDDRRRDRDRSERREPSSRRGWKDRSGDQTPRFKVPDTPSRMSWDQDDREGSSRKRNSW 154
Query: 205 DRDEPEYGGEYGRKRSKYDGTRRTPGRSDWDDGRWEWEDTPRR 247
D P GE RKR Y + R+ S W R +D RR
Sbjct: 155 DMPTPR--GERDRKR--YMDSERSIS-SAWRSERRNRDDEKRR 192
Score = 52 (23.4 bits), Expect = 4.3e-270, Sum P(2) = 4.3e-270
Identities = 23/86 (26%), Positives = 39/86 (45%)
Query: 168 RGS-ERKYLKDDTRS-ESRGPSRRDNYDSKGRYRGREARD--------RDEPEYGGEYGR 217
RG +RK D RS S S R N D + R R R+ D + EP + +
Sbjct: 160 RGERDRKRYMDSERSISSAWRSERRNRDDEKRRRHRKPEDSVRSVKEEKAEPTFHDD--E 217
Query: 218 KRSKYDGTRRTPGRSDWDDGRWEWED 243
+R++++ ++ R +W D ++D
Sbjct: 218 ERAQWEEEQKNLDR-EWYDNEGAFDD 242
>UNIPROTKB|F1NY80 [details] [associations]
symbol:F1NY80 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0071013 "catalytic step
2 spliceosome" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104421 OMA:PSRSTWE
EMBL:AADN02054197 EMBL:AADN02054196 IPI:IPI00821409
Ensembl:ENSGALT00000038723 Uniprot:F1NY80
Length = 1170
Score = 1573 (558.8 bits), Expect = 7.6e-261, Sum P(3) = 7.6e-261
Identities = 314/543 (57%), Positives = 411/543 (75%)
Query: 350 TESMRLEMEYN---SDRAWYDREEGTTMFDTDSSSFILGDDASYQKKEVELAKRLVRKDG 406
TE R + E + +DR WY +EG +D + D +K+E L K+ +
Sbjct: 314 TEEERQQWEDDQRQADRDWYMMDEG---YDEFHNPLAYSSDEYVKKREQHLHKQKQK--- 367
Query: 407 SRMSLAQSKKLSQITADNHQWEERQLLRSGAVRGTELSTEFDDEEEHKVILLVHDTKPPF 466
R+S AQ + QI DN +WE ++L SG V E+ +F+++ KV LLVH+ PPF
Sbjct: 368 -RIS-AQRR---QINEDNERWETNRMLTSGVVHRIEVDEDFEEDNSAKVHLLVHNLVPPF 422
Query: 467 LDGRIVFTKQAEPVMPIKDPTSDMAIISRKGSALVREIREKQTQNKSRQRFWELAGSQMG 526
LDGRIVFTKQ EPV+P+KD TSD+AII+RKGS LVR+ RE++ + +++ + WELAG+++G
Sbjct: 423 LDGRIVFTKQPEPVIPVKDATSDLAIIARKGSQLVRKHREQKERKRAQHKHWELAGTKLG 482
Query: 527 NILGVKKTAEQVDADTAVVGEQGEIDFREDAKFSQHMK-KGEAVSDFAKSKTLAEQRQYL 585
+I+G+KK E+ + +V E G++D+R + KF++HMK K EA S+FAK K++ EQRQYL
Sbjct: 483 DIMGIKKEEEKDE----MVTEDGKVDYRTEQKFAEHMKEKSEARSEFAKKKSILEQRQYL 538
Query: 586 PIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNGIVGCTQPRRVAAMS 645
PIF+V+ ELL ++R+N GETGSGKTTQLTQYL EDGYT G++GCTQPRRVAAMS
Sbjct: 539 PIFAVQQELLSILRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCTQPRRVAAMS 598
Query: 646 VAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDSDLDKYRVIVMD 705
VAKRVSEEM LG++VGYAIRFED T +T+IKYMTDG+LLRE+L+++DLD Y I+MD
Sbjct: 599 VAKRVSEEMGVRLGEEVGYAIRFEDCTSENTIIKYMTDGILLRESLREADLDNYSAIIMD 658
Query: 706 EAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPIFHIPGRTFPVN 765
EAHERSL+TDVLFG+L++VVARR D KL+VTSAT++A KF+ FFG+VPIFHIPGRTFPV+
Sbjct: 659 EAHERSLNTDVLFGLLREVVARRSDLKLVVTSATMDADKFASFFGNVPIFHIPGRTFPVD 718
Query: 766 TLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQLISSTT 825
L+SKTP EDYVEAAVKQA+ +H++ PGDIL+FM GQ++IE + E +E+L
Sbjct: 719 ILFSKTPQEDYVEAAVKQALQVHLSGAPGDILVFMPGQEDIEVTSEQIVEHLEEL----- 773
Query: 826 REVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGK 885
+ P L +LPIYSQLP+DLQAKIF+KA +G RKCIVATNIAETSLTVDGI +VID+GY K
Sbjct: 774 EKAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCK 833
Query: 886 MKV 888
+KV
Sbjct: 834 LKV 836
Score = 841 (301.1 bits), Expect = 7.6e-261, Sum P(3) = 7.6e-261
Identities = 163/319 (51%), Positives = 214/319 (67%)
Query: 968 DFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLD 1027
+F P + L S L G G LT G +MVEFPLDP L+KML++ +GC
Sbjct: 853 EFYGSEPAFHWLQSALLLPFSGGFIPPGGLTSTGRQMVEFPLDPALSKMLIVSCDMGCSS 912
Query: 1028 EVLTIVSMLSVPSVFFRPKDRAEESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCE 1087
E+L IVSMLSVP++F+RPK R EESD REKF V ESDHLT L VY QWK + Y WC
Sbjct: 913 EILLIVSMLSVPAIFYRPKGREEESDQVREKFAVPESDHLTYLNVYLQWKNNNYSTLWCN 972
Query: 1088 EHYLHVKSLRKAREVRSQLLDILKTLKIPLTSSGHDFDVVRKAICSAYFHNAARLKGVGE 1147
+H++H K++RK REVR+QL DI+ ++ L S G D+DVVRK IC+AYFH AA+LKG+GE
Sbjct: 973 QHFIHAKAMRKVREVRAQLKDIMVQQRMSLASCGTDWDVVRKCICAAYFHQAAKLKGIGE 1032
Query: 1148 YINCRNGMPCHLHPSSAIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFF 1207
Y+N R GMPCHLHP+S+++G+GYTP+Y+VYHEL++TTKEYMQC TAV+ +WL+ELGPMF+
Sbjct: 1033 YVNIRTGMPCHLHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFY 1092
Query: 1208 SVKDSDTSMLEHKKKQKESKTAMEEEMENLRKIQADXXXXXXXXXXXXXXXXXQQVSMPG 1267
S+K + S E++++ KE +AMEEEM L + Q ++ PG
Sbjct: 1093 SIKHAGKSRQENRRRAKEEASAMEEEMA-LAEEQLRARREEQERRNPLGSARCTKIYTPG 1151
Query: 1268 WR-QGS--TTYLRPKKFGL 1283
+ QG T P +FGL
Sbjct: 1152 RKEQGEPLTPRRTPARFGL 1170
Score = 137 (53.3 bits), Expect = 7.6e-261, Sum P(3) = 7.6e-261
Identities = 83/323 (25%), Positives = 122/323 (37%)
Query: 98 TNGKRSHASRRYRE-TSARDIT---DAENPMAVGRAGETAGTHRSNEHAYVEXXXXXXXX 153
T+GKRS S YR+ RD D E R+G + R +VE
Sbjct: 69 TSGKRSRVSS-YRDWEEGRDEAGSPDEEEDEEEDRSGRSTRKDRHYRSVHVETPSYTGGV 127
Query: 154 XXXXXXXXRH---DRDDRG----SERKYLKDDTRSESRGPSR-RDNYD-SKGRYRGREAR 204
R +R + G S+ K K + S RG R RD D + R+ R R
Sbjct: 128 SEEFWERSRQRERERREHGVFASSKEKERKKE-HSRDRGHDRKRDREDWDRSRHSSRSER 186
Query: 205 D----RDEPEYGGEYGRKRSKYDGTRRTPGRSDWDDGRWEWEDTPRREGYSNSSKRYQ-- 258
D R+ E + R K D TP RS W++ ED+ YS SS+R Q
Sbjct: 187 DGSLERNSRRSEPESPKHRPK-DAA--TPSRSSWEE-----EDS----SYS-SSRRSQWE 233
Query: 259 -PSPSPMFVGASPDARLVSPLSTPRSNGYAASPWDHISPSPVPIRAXXXXXXXXXXXXXX 317
PSP+P + + R + + S + +P P P +
Sbjct: 234 SPSPTPSYRDSERSHRASRDIDRRDRDRSVRSRYSDKTPLPTP--SYKYNEWADDRKHLG 291
Query: 318 XXHQLTFSRESSQSFEDGVADETYSEEHNYEITESMRLEMEYNSDRAWYDREEGTTMFDT 377
+L+ R + E+G+A ET E +E + R +DR WY +EG +D
Sbjct: 292 STPRLSRGRGRREDGEEGIAFETEEERQQWE--DDQR-----QADRDWYMMDEG---YDE 341
Query: 378 DSSSFILGDDASYQKKEVELAKR 400
+ D +K+E L K+
Sbjct: 342 FHNPLAYSSDEYVKKREQHLHKQ 364
Score = 51 (23.0 bits), Expect = 2.6e-95, Sum P(3) = 2.6e-95
Identities = 13/57 (22%), Positives = 26/57 (45%)
Query: 700 RVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPIFH 756
+ IV E SL+ D + ++ + + K + + ++ +F+GS P FH
Sbjct: 806 KCIVATNIAETSLTVDGIMFVIDSGYCKLKVSKGFLYCSWISGTGLIEFYGSEPAFH 862
Score = 43 (20.2 bits), Expect = 6.4e-251, Sum P(3) = 6.4e-251
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 203 ARDRDEPEYGGEYGRKRSKYDGTRRTPGRSDWDDGRWE 240
A+ R E E G G KRS+ R DW++GR E
Sbjct: 58 AQKRREREEEGTSG-KRSRVSSYR------DWEEGRDE 88
>UNIPROTKB|E1C094 [details] [associations]
symbol:E1C094 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AADN02054197 EMBL:AADN02054196
IPI:IPI00591998 Ensembl:ENSGALT00000001141 Uniprot:E1C094
Length = 1164
Score = 1573 (558.8 bits), Expect = 6.8e-260, Sum P(3) = 6.8e-260
Identities = 314/543 (57%), Positives = 411/543 (75%)
Query: 350 TESMRLEMEYN---SDRAWYDREEGTTMFDTDSSSFILGDDASYQKKEVELAKRLVRKDG 406
TE R + E + +DR WY +EG +D + D +K+E L K+ +
Sbjct: 311 TEEERQQWEDDQRQADRDWYMMDEG---YDEFHNPLAYSSDEYVKKREQHLHKQKQK--- 364
Query: 407 SRMSLAQSKKLSQITADNHQWEERQLLRSGAVRGTELSTEFDDEEEHKVILLVHDTKPPF 466
R+S AQ + QI DN +WE ++L SG V E+ +F+++ KV LLVH+ PPF
Sbjct: 365 -RIS-AQRR---QINEDNERWETNRMLTSGVVHRIEVDEDFEEDNSAKVHLLVHNLVPPF 419
Query: 467 LDGRIVFTKQAEPVMPIKDPTSDMAIISRKGSALVREIREKQTQNKSRQRFWELAGSQMG 526
LDGRIVFTKQ EPV+P+KD TSD+AII+RKGS LVR+ RE++ + +++ + WELAG+++G
Sbjct: 420 LDGRIVFTKQPEPVIPVKDATSDLAIIARKGSQLVRKHREQKERKRAQHKHWELAGTKLG 479
Query: 527 NILGVKKTAEQVDADTAVVGEQGEIDFREDAKFSQHMK-KGEAVSDFAKSKTLAEQRQYL 585
+I+G+KK E+ + +V E G++D+R + KF++HMK K EA S+FAK K++ EQRQYL
Sbjct: 480 DIMGIKKEEEKDE----MVTEDGKVDYRTEQKFAEHMKEKSEARSEFAKKKSILEQRQYL 535
Query: 586 PIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNGIVGCTQPRRVAAMS 645
PIF+V+ ELL ++R+N GETGSGKTTQLTQYL EDGYT G++GCTQPRRVAAMS
Sbjct: 536 PIFAVQQELLSILRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCTQPRRVAAMS 595
Query: 646 VAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDSDLDKYRVIVMD 705
VAKRVSEEM LG++VGYAIRFED T +T+IKYMTDG+LLRE+L+++DLD Y I+MD
Sbjct: 596 VAKRVSEEMGVRLGEEVGYAIRFEDCTSENTIIKYMTDGILLRESLREADLDNYSAIIMD 655
Query: 706 EAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPIFHIPGRTFPVN 765
EAHERSL+TDVLFG+L++VVARR D KL+VTSAT++A KF+ FFG+VPIFHIPGRTFPV+
Sbjct: 656 EAHERSLNTDVLFGLLREVVARRSDLKLVVTSATMDADKFASFFGNVPIFHIPGRTFPVD 715
Query: 766 TLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQLISSTT 825
L+SKTP EDYVEAAVKQA+ +H++ PGDIL+FM GQ++IE + E +E+L
Sbjct: 716 ILFSKTPQEDYVEAAVKQALQVHLSGAPGDILVFMPGQEDIEVTSEQIVEHLEEL----- 770
Query: 826 REVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGK 885
+ P L +LPIYSQLP+DLQAKIF+KA +G RKCIVATNIAETSLTVDGI +VID+GY K
Sbjct: 771 EKAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCK 830
Query: 886 MKV 888
+KV
Sbjct: 831 LKV 833
Score = 832 (297.9 bits), Expect = 6.8e-260, Sum P(3) = 6.8e-260
Identities = 157/294 (53%), Positives = 206/294 (70%)
Query: 993 NVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEES 1052
N LT G +MVEFPLDP L+KML++ +GC E+L IVSMLSVP++F+RPK R EES
Sbjct: 872 NPRGLTSTGRQMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGREEES 931
Query: 1053 DAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQLLDILKT 1112
D REKF V ESDHLT L VY QWK + Y WC +H++H K++RK REVR+QL DI+
Sbjct: 932 DQVREKFAVPESDHLTYLNVYLQWKNNNYSTLWCNQHFIHAKAMRKVREVRAQLKDIMVQ 991
Query: 1113 LKIPLTSSGHDFDVVRKAICSAYFHNAARLKGVGEYINCRNGMPCHLHPSSAIYGLGYTP 1172
++ L S G D+DVVRK IC+AYFH AA+LKG+GEY+N R GMPCHLHP+S+++G+GYTP
Sbjct: 992 QRMSLASCGTDWDVVRKCICAAYFHQAAKLKGIGEYVNIRTGMPCHLHPTSSLFGMGYTP 1051
Query: 1173 EYVVYHELILTTKEYMQCATAVEPQWLSELGPMFFSVKDSDTSMLEHKKKQKESKTAMEE 1232
+Y+VYHEL++TTKEYMQC TAV+ +WL+ELGPMF+S+K + S E++++ KE +AMEE
Sbjct: 1052 DYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSIKHAGKSRQENRRRAKEEASAMEE 1111
Query: 1233 EMENLRKIQADXXXXXXXXXXXXXXXXXQQVSMPGWR-QGS--TTYLRPKKFGL 1283
EM L + Q ++ PG + QG T P +FGL
Sbjct: 1112 EMA-LAEEQLRARREEQERRNPLGSARCTKIYTPGRKEQGEPLTPRRTPARFGL 1164
Score = 137 (53.3 bits), Expect = 6.8e-260, Sum P(3) = 6.8e-260
Identities = 83/323 (25%), Positives = 122/323 (37%)
Query: 98 TNGKRSHASRRYRE-TSARDIT---DAENPMAVGRAGETAGTHRSNEHAYVEXXXXXXXX 153
T+GKRS S YR+ RD D E R+G + R +VE
Sbjct: 66 TSGKRSRVSS-YRDWEEGRDEAGSPDEEEDEEEDRSGRSTRKDRHYRSVHVETPSYTGGV 124
Query: 154 XXXXXXXXRH---DRDDRG----SERKYLKDDTRSESRGPSR-RDNYD-SKGRYRGREAR 204
R +R + G S+ K K + S RG R RD D + R+ R R
Sbjct: 125 SEEFWERSRQRERERREHGVFASSKEKERKKE-HSRDRGHDRKRDREDWDRSRHSSRSER 183
Query: 205 D----RDEPEYGGEYGRKRSKYDGTRRTPGRSDWDDGRWEWEDTPRREGYSNSSKRYQ-- 258
D R+ E + R K D TP RS W++ ED+ YS SS+R Q
Sbjct: 184 DGSLERNSRRSEPESPKHRPK-DAA--TPSRSSWEE-----EDS----SYS-SSRRSQWE 230
Query: 259 -PSPSPMFVGASPDARLVSPLSTPRSNGYAASPWDHISPSPVPIRAXXXXXXXXXXXXXX 317
PSP+P + + R + + S + +P P P +
Sbjct: 231 SPSPTPSYRDSERSHRASRDIDRRDRDRSVRSRYSDKTPLPTP--SYKYNEWADDRKHLG 288
Query: 318 XXHQLTFSRESSQSFEDGVADETYSEEHNYEITESMRLEMEYNSDRAWYDREEGTTMFDT 377
+L+ R + E+G+A ET E +E + R +DR WY +EG +D
Sbjct: 289 STPRLSRGRGRREDGEEGIAFETEEERQQWE--DDQR-----QADRDWYMMDEG---YDE 338
Query: 378 DSSSFILGDDASYQKKEVELAKR 400
+ D +K+E L K+
Sbjct: 339 FHNPLAYSSDEYVKKREQHLHKQ 361
Score = 53 (23.7 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 33/154 (21%), Positives = 61/154 (39%)
Query: 700 RVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPIFH--- 756
+ IV E SL+ D + ++ + + K + + ++ +F+GS P FH
Sbjct: 803 KCIVATNIAETSLTVDGIMFVIDSGYCKLKVSKGFLYCSWISGTGLIEFYGSEPAFHWLQ 862
Query: 757 ----IPGRTFPVN-TLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACF 811
+P R P T + E ++ A+ + + + ++ + + A +
Sbjct: 863 SALLLPFRFNPRGLTSTGRQMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFY 922
Query: 812 ALKERMEQLISSTTRE---VPE---LLILPIYSQ 839
K R E+ S RE VPE L L +Y Q
Sbjct: 923 RPKGREEE--SDQVREKFAVPESDHLTYLNVYLQ 954
Score = 43 (20.2 bits), Expect = 5.7e-250, Sum P(3) = 5.7e-250
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 203 ARDRDEPEYGGEYGRKRSKYDGTRRTPGRSDWDDGRWE 240
A+ R E E G G KRS+ R DW++GR E
Sbjct: 55 AQKRREREEEGTSG-KRSRVSSYR------DWEEGRDE 85
>UNIPROTKB|G4MTU4 [details] [associations]
symbol:MGG_11351 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp16" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:CM001232 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K12815 RefSeq:XP_003713740.1 EnsemblFungi:MGG_11351T0
GeneID:5051310 KEGG:mgr:MGG_11351 Uniprot:G4MTU4
Length = 999
Score = 2480 (878.1 bits), Expect = 1.2e-257, P = 1.2e-257
Identities = 481/886 (54%), Positives = 633/886 (71%)
Query: 356 EMEYNSDRAWYDREE-GTTMFDTDSSSFIL-GDDASYQKKEVELAKRLVRKDGSRMSLAQ 413
E E DR WY +E G T D + F DD+ +K+++E K+ R D RMS
Sbjct: 77 EDETALDRDWYAGDETGHTFGDEYHNPFAAYADDSLAEKEQIE--KKTGRFD--RMSARA 132
Query: 414 SKKLSQITADNHQWEERQLLRSGAVRGTELSTEF-DDEEEHKVILLVHDTKPPFLDGRIV 472
+K I A WE ++L SG + +L +F DDEE ++ LLVHD KPPFLDGR V
Sbjct: 133 QQKQRDIDA----WETNRMLTSGVAQRRDLGADFEDDEEATRIHLLVHDLKPPFLDGRTV 188
Query: 473 FTKQAEPVMPIKDPTSDMAIISRKGSALVREIREKQTQNKSRQRFWELAGSQMGNILGVK 532
FTKQ EPV ++D SDMA+ SRKGS +V+E R+++ + K Q +AG+ +GN++G+K
Sbjct: 189 FTKQLEPVPAVRDNQSDMAVFSRKGSRVVKERRQQRERQKQAQDATNMAGTALGNLMGIK 248
Query: 533 KTAEQVDADTAVVGEQGEIDFR---EDAKFSQHMKKGEAVSDFAKSKTLAEQRQYLPIFS 589
E D+ V +Q + + D KFS+HMKK + S+F+++K++ EQR++LP F+
Sbjct: 249 GE-EDGDSALPVPDDQAPAEVKAEKSDNKFSEHMKKNDGASNFSQTKSIREQREFLPAFA 307
Query: 590 VRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNGIVGCTQPRRVAAMSVAKR 649
VR++L++VIR+NQ GETGSGKTTQLTQ+L EDGY G++GCTQPRRVAAMSVAKR
Sbjct: 308 VREDLMRVIRDNQVIIVVGETGSGKTTQLTQFLYEDGYGQLGMIGCTQPRRVAAMSVAKR 367
Query: 650 VSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDSDLDKYRVIVMDEAHE 709
VSEEM+ +LG VGYAIRFED T T+IKYMTDGVLLRE+L + DLD+Y I+MDEAHE
Sbjct: 368 VSEEMEVKLGGTVGYAIRFEDCTSKDTVIKYMTDGVLLRESLNEPDLDRYSCIIMDEAHE 427
Query: 710 RSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPIFHIPGRTFPVNTLYS 769
R+L+TDVL G+ KK++ RRRD KLIVTSAT+NA++FSDFFG P F IPGRTFPV+ ++S
Sbjct: 428 RALNTDVLMGLFKKILQRRRDLKLIVTSATMNAKRFSDFFGGAPDFTIPGRTFPVDVMFS 487
Query: 770 KTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVP 829
++P EDYV+ AV+Q + IH++ GDIL+FMTGQ++IE C ++ER++ L + P
Sbjct: 488 RSPVEDYVDQAVQQVLNIHVSMGTGDILVFMTGQEDIEVTCELVRERLDAL-----NDPP 542
Query: 830 ELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVY 889
+L ILPIYSQ+PADLQAKIF++A G RKCIVATNIAETSLTVDGI YV+D GY K+KVY
Sbjct: 543 KLSILPIYSQMPADLQAKIFDRAPPGVRKCIVATNIAETSLTVDGIMYVVDAGYSKLKVY 602
Query: 890 NPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNL 949
NPKMGMD LQ+ P+S +RL+TE A+ +E+ +PEIQRTNL
Sbjct: 603 NPKMGMDTLQITPISQANASQRSGRAGRTGPGKAFRLFTEKAFKDELYIQTIPEIQRTNL 662
Query: 950 GNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPL 1009
N + FDFMDPPPQ+ + S++ LW LGAL+N+G +TDLG KM FP+
Sbjct: 663 SNTILLIKSLGVKDMLDFDFMDPPPQDTMTTSLFDLWALGALDNLGDMTDLGRKMNFFPM 722
Query: 1010 DPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAAREKFFVQESDHLTL 1069
DPPLAK+++M E+ GC +E++TIVSMLSVP+VF+RPK+R EESDAAREKFFV ESDHLT
Sbjct: 723 DPPLAKLIIMAEEYGCTEEMITIVSMLSVPNVFYRPKERQEESDAAREKFFVPESDHLTF 782
Query: 1070 LYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQLLDILKTLKIPLTSSGHDFDVVRK 1129
L+VY QWK + + WC H+LH KSLR+A+EVR QLLDI+KT K+ + S G D+DVVR+
Sbjct: 783 LHVYSQWKANGHSDAWCSRHFLHSKSLRRAKEVRDQLLDIMKTQKMDIVSCGTDWDVVRR 842
Query: 1130 AICSAYFHNAARLKGVGEYINCRNGMPCHLHPSSAIYGLGYTPEYVVYHELILTTKEYMQ 1189
ICS Y+H AA++KG+GEYIN R + LHP+SA+YGLG+ P+YVVYHELILT+KEYM
Sbjct: 843 CICSGYYHQAAKVKGIGEYINLRTSVTVQLHPTSALYGLGFLPDYVVYHELILTSKEYMS 902
Query: 1190 CATAVEPQWLSELGPMFFSVKDSDTSMLEHKKKQKESKTAMEEEME 1235
T+V+P WL++LG +F+SVK+ S + + + E ME E +
Sbjct: 903 TVTSVDPMWLADLGGVFYSVKEKGYSARDKRVVETEFNRKMEIEAQ 948
>ASPGD|ASPL0000014477 [details] [associations]
symbol:AN4032 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 EMBL:BN001302
EMBL:AACD01000065 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12815 OMA:PSRSTWE OrthoDB:EOG4GQTD2
RefSeq:XP_661636.1 EnsemblFungi:CADANIAT00004650 GeneID:2873454
KEGG:ani:AN4032.2 Uniprot:Q5B5Z8
Length = 924
Score = 2468 (873.8 bits), Expect = 2.2e-256, P = 2.2e-256
Identities = 486/843 (57%), Positives = 614/843 (72%)
Query: 398 AKRLVRKDGSRMSLAQSKKLSQITADNHQWEERQLLRSGAVRGTELSTEF--DDEEEHKV 455
AKRL K + + K I DN WE ++L SG + + +F +DEE +V
Sbjct: 8 AKRL--KSSNLPPALRDAKRKDI--DN--WETNRMLTSGVAQRRDFDGDFLPEDEEGTRV 61
Query: 456 ILLVHDTKPPFLDGRIVFTKQAEPVMPIKDPTSDMAIISRKGSALVREIREKQTQNKSRQ 515
LLVHD +PPFLDGR +FTKQ EPV ++DP SDMA+ SRKGS +VR+ R+++ + K Q
Sbjct: 62 HLLVHDLRPPFLDGRTIFTKQLEPVSAVRDPQSDMAVFSRKGSRVVRDRRQQRERQKQAQ 121
Query: 516 RFWELAGSQMGNILGVKKTAEQVDADTAVVGEQGEIDFREDAKFSQHMKKGE--AVSDFA 573
+AG+ +GN++GVK+ + DTAV E+ ++ KF+ HMKK + S F+
Sbjct: 122 EATTVAGTALGNLMGVKED----EGDTAVAMPVEEV-YKGGNKFAHHMKKQDEGGQSSFS 176
Query: 574 KSKTLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNGIV 633
KSKTL EQR++LP F+VR++LL+VIR+NQ GETGSGKTTQLTQ+L EDGY G++
Sbjct: 177 KSKTLREQREFLPAFAVREDLLRVIRDNQVVVVVGETGSGKTTQLTQFLYEDGYAKFGMI 236
Query: 634 GCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKD 693
GCTQPRRVAAMSVAKRVSEEM+ +LGD VGYAIRFED TGP+T IKYMTDGVLLRE+L
Sbjct: 237 GCTQPRRVAAMSVAKRVSEEMEVDLGDLVGYAIRFEDCTGPNTAIKYMTDGVLLRESLVQ 296
Query: 694 SDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVP 753
+DLDKY I+MDEAHER+L+TDVL G+LKK++ARRRD KLIVTSAT+NA++FS FFG P
Sbjct: 297 TDLDKYSCIIMDEAHERALNTDVLMGLLKKILARRRDLKLIVTSATMNAERFSRFFGGAP 356
Query: 754 IFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFAL 813
F IPGRTFPV+ +S+TPCEDYV++AVKQ + IH++ PGDIL+FMTGQ++IEA C +
Sbjct: 357 EFIIPGRTFPVDVHFSRTPCEDYVDSAVKQVLAIHVSQGPGDILVFMTGQEDIEATCELV 416
Query: 814 KERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVD 873
ER++ L + P+L ILPIYSQ+PA+ QAKIFE+A G RK IVATNIAETSLTVD
Sbjct: 417 DERLKLL-----NDPPKLSILPIYSQMPAEQQAKIFERAAPGVRKVIVATNIAETSLTVD 471
Query: 874 GIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYL 933
GI +V+D+GY K+KVYNPKMGMD LQ+ P+S YRLYTE AY
Sbjct: 472 GIMFVVDSGYSKLKVYNPKMGMDTLQITPISQANANQRSGRAGRTGPGKAYRLYTEVAYK 531
Query: 934 NEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNN 993
NEM +PEIQRT+L N V FDFMDPPPQE I S+++LW LGAL+N
Sbjct: 532 NEMYLQTIPEIQRTSLSNTVLLLKSLGVKDLLDFDFMDPPPQETISTSLFELWSLGALDN 591
Query: 994 VGALTDLGWKMVEFPLDPPLAKMLLMG-EQLGCLDEVLTIVSMLSVPSVFFRPKDRAEES 1052
+G LT LG +M FP+DPPLAK+++ EQ GC +E+LTIVSMLSVP+VF+RPK+R EES
Sbjct: 592 LGDLTHLGRQMTPFPMDPPLAKLIITAAEQYGCSEEMLTIVSMLSVPNVFYRPKERQEES 651
Query: 1053 DAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQLLDILKT 1112
DAAREKFFV ESDHLTLL+VY QWK + Y WC +H+LH K+LR+A+EVR QL DI+
Sbjct: 652 DAAREKFFVPESDHLTLLHVYTQWKSNGYSDHWCTKHFLHAKTLRRAKEVRDQLNDIMVM 711
Query: 1113 LKIPLTSSGHDFDVVRKAICSAYFHNAARLKGVGEYINCRNGMPCHLHPSSAIYGLGYTP 1172
K+PL S G D+D +RK ICS ++H AAR+KG+GE+IN R + LHP+SA+YGLGY P
Sbjct: 712 QKLPLISCGTDWDEIRKCICSGFYHQAARVKGIGEFINLRTSVSMALHPTSALYGLGYVP 771
Query: 1173 EYVVYHELILTTKEYMQCATAVEPQWLSELGPMFFSVKDSDTSMLEHKKKQKESKTAMEE 1232
EYVVYHELILT+KEYM TAV+P WL+ELG +F+SVK+ S E + ++E ME
Sbjct: 772 EYVVYHELILTSKEYMSTVTAVDPHWLAELGGVFYSVKEKGYSHRERRVTEQEFNRRMEI 831
Query: 1233 EME 1235
E +
Sbjct: 832 ESQ 834
>UNIPROTKB|F1S3A8 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104877 EMBL:CU914723
Ensembl:ENSSSCT00000003045 OMA:IATIPEI Uniprot:F1S3A8
Length = 766
Score = 2402 (850.6 bits), Expect = 2.2e-249, P = 2.2e-249
Identities = 459/776 (59%), Positives = 582/776 (75%)
Query: 512 KSRQRFWELAGSQMGNILGVKKTAEQVDADTAVVGEQGEIDFREDAKFSQHMKK-GEAVS 570
+++ + WELAG+++G+I+GVKK E D A+ E G++D+R + KF+ HMKK EA S
Sbjct: 1 QAQHKHWELAGTKLGDIMGVKKEEEP---DKALT-EDGKVDYRTEQKFADHMKKKSEASS 56
Query: 571 DFAKSKTLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTN 630
+FAK K++ EQRQYLPIF+V+ ELL +IR+N GETGSGKTTQLTQYL EDGYT
Sbjct: 57 EFAKKKSILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDY 116
Query: 631 GIVGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRET 690
G++GCTQPRRVAAMSVAKRVSEEM LG++VGYAIRFED T STLIKYMTDG+LLRE+
Sbjct: 117 GMIGCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSESTLIKYMTDGILLRES 176
Query: 691 LKDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFG 750
L+++DLD Y I+MDEAHERSL+TDVLFG+L++VVARR D KLIVTSAT++A+KF+ FFG
Sbjct: 177 LREADLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFASFFG 236
Query: 751 SVPIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAAC 810
+VPIFHIPGRTFPV+ L+SKTP EDYVEAAVKQ++ +H++ PGDILIFM GQ++IE
Sbjct: 237 NVPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTS 296
Query: 811 FALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSL 870
+ E +E+L P L +LPIYSQLP+DLQAKIF+KA +G RKCIVATNIAETSL
Sbjct: 297 DQIVEHLEEL-----ENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSL 351
Query: 871 TVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTES 930
TVDGI +VID+GY K+KV+NP++GMDALQ++P+S C+RLYT+S
Sbjct: 352 TVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYTQS 411
Query: 931 AYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGA 990
AY NE+L + VPEIQRTNL NVV F FMDPPP++N+LNSMYQLW+LGA
Sbjct: 412 AYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGA 471
Query: 991 LNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAE 1050
L+N G LT G MVEFPLDP L+KML++ +GC E+L IVSMLSVP++F+RPK R E
Sbjct: 472 LDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGREE 531
Query: 1051 ESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQLLDIL 1110
ESD REKF V ESDHLT L VY QWK + Y WC +H++H K++RK REVR+QL DI+
Sbjct: 532 ESDQIREKFAVPESDHLTYLNVYLQWKNNNYSTIWCNDHFIHAKAMRKVREVRAQLKDIM 591
Query: 1111 KTLKIPLTSSGHDFDVVRKAICSAYFHNAARLKGVGEYINCRNGMPCHLHPSSAIYGLGY 1170
++ L S G D+D+VRK IC+AYFH AA+LKG+GEY+N R GMPCHLHP+S+++G+GY
Sbjct: 592 VQQRMSLASCGTDWDIVRKCICAAYFHQAAKLKGIGEYVNIRTGMPCHLHPTSSLFGMGY 651
Query: 1171 TPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFFSVKDSDTSMLEHKKKQKESKTAM 1230
TP+Y+VYHEL++TTKEYMQC TAV+ +WL+ELGPMF+SVK + S E++++ KE +AM
Sbjct: 652 TPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSVKQAGKSRQENRRRAKEEASAM 711
Query: 1231 EEEMENLRKIQADXXXXXXXXXXXXXXXXXQQVSMPGWR-QGS--TTYLRPKKFGL 1283
EEEM L + Q ++ PG + QG T P +FGL
Sbjct: 712 EEEMA-LAEEQLRARRQEQEKRSPLGSVRSTKIYTPGRKEQGEPMTPRRTPARFGL 766
>POMBASE|SPBC1711.17 [details] [associations]
symbol:prp16 "ATP-dependent RNA helicase Prp16
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000350
"generation of catalytic spliceosome for second transesterification
step" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005681 "spliceosomal
complex" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 PomBase:SPBC1711.17 GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0005681 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
KO:K12815 GO:GO:0000350 OMA:PSRSTWE PIR:T39724 RefSeq:NP_595890.2
ProteinModelPortal:Q9P774 IntAct:Q9P774 EnsemblFungi:SPBC1711.17.1
GeneID:2540006 KEGG:spo:SPBC1711.17 OrthoDB:EOG4GQTD2
NextBio:20801149 Uniprot:Q9P774
Length = 1173
Score = 2300 (814.7 bits), Expect = 7.6e-242, Sum P(2) = 7.6e-242
Identities = 457/927 (49%), Positives = 627/927 (67%)
Query: 324 FSRESSQSFEDGVADETYSEEHNYEITESMRLEMEYNSDRAWYDREEGTTMFDTDSSSFI 383
+S +S S+ + + E+ E ES + ++A DR+ + S +
Sbjct: 243 YSHDSDYSYGAHSSWDARDVEYPEEDPESKADRQRWEEEQAHLDRD----WYMNSESQNL 298
Query: 384 LGDDASYQKKEVELAKRLVRKDGSRMSLAQSKKLSQITAD----NHQWEERQLLRSGAVR 439
LGD+ + E + R + Q K LS +D N WE+ +++ SG +
Sbjct: 299 LGDEVHNPFSDFETVED--RAHEAEFIEKQKKHLSIEASDRFKENSMWEKNRMITSGVSK 356
Query: 440 GTELSTEFDDEEEHKVILLVHDTKPPFLDGRIVFTKQAEPVMPIKDPTSDMAIISRKGSA 499
L +++ EE +V LLV + +P FLDG +K+ + ++DP SD+AI +R GS
Sbjct: 357 APGLESDYSLMEERRVHLLVDELRPHFLDGAEFSSKKVGDITSVRDPQSDLAINARLGSR 416
Query: 500 LVREIREKQTQNKSRQRFWELAGSQMGNILGVKKTAEQVDADTAVVGEQGEIDFREDAKF 559
LVRE RE + + K+ LAG+ +GN++G+K + ++ DA + G + +
Sbjct: 417 LVRERREFRERQKAASAATSLAGTSLGNVMGLKDSNDE-DA------KAGTTPVKVAGRS 469
Query: 560 SQHMKKGEAVSDFAKSKTLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLT 619
Q KK ++FA++K+ EQR++LP F+VR++LL VIR+NQ GETGSGKTTQL
Sbjct: 470 EQSNKKD---TEFARTKSYREQREFLPAFAVREQLLSVIRDNQVLIVVGETGSGKTTQLA 526
Query: 620 QYLLEDGYTTNGIVGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIK 679
Q+L EDGY NG++GCTQPRRVAAMSVAKRVSEEM LG VGY+IRFEDVTGP T+IK
Sbjct: 527 QFLYEDGYHRNGMIGCTQPRRVAAMSVAKRVSEEMGVRLGSTVGYSIRFEDVTGPDTVIK 586
Query: 680 YMTDGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSAT 739
YMTDGVLLRE+L ++L+KY VI+MDEAHERSL+TD+L G+LKKV++RRRD KL+VTSAT
Sbjct: 587 YMTDGVLLRESLMQNNLEKYSVIIMDEAHERSLNTDILMGLLKKVLSRRRDIKLLVTSAT 646
Query: 740 LNAQKFSDFFGSVPIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIF 799
+N+QKFSDFFG P F IPGRT+PV+ +++K PC DYVEAAV+Q + IH++ P GDIL+F
Sbjct: 647 MNSQKFSDFFGGAPQFTIPGRTYPVDIMFAKAPCSDYVEAAVRQVLQIHLSQPAGDILVF 706
Query: 800 MTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKC 859
MTGQ++IEA C + +R+ QL + P L ILPIYSQ+PADLQAKIF+ A+ G RK
Sbjct: 707 MTGQEDIEATCEIIADRLNQL-----HDAPRLSILPIYSQMPADLQAKIFDSAEPGVRKV 761
Query: 860 IVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXX 919
+VATNIAETSLTV GI YV+DTGY K+K+YN K+G+D LQV P+S
Sbjct: 762 VVATNIAETSLTVHGISYVVDTGYCKLKMYNSKLGIDTLQVTPISQANANQRAGRAGRTG 821
Query: 920 XXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENIL 979
YRLYTE AY+ EM + +PEIQRTNL N V FDFMD PP + ++
Sbjct: 822 PGIAYRLYTEMAYIREMFETTLPEIQRTNLSNTVLILKSLGVEEISDFDFMDRPPNDTLM 881
Query: 980 NSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVP 1039
S+Y+LW LGAL+N G LT LG KM FP+DP L+K++++ E C +E++TIVSMLSVP
Sbjct: 882 ASLYELWTLGALDNFGKLTTLGKKMSLFPMDPSLSKLIIIAEDYKCTEEIITIVSMLSVP 941
Query: 1040 SVFFRPKDRAEESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKA 1099
SVF+RPK+RAEESDAAREKF V ESDHL LL +YQ W+ + Y WC +H+LH K+L++A
Sbjct: 942 SVFYRPKERAEESDAAREKFNVPESDHLMLLNIYQHWQRNGYSNSWCSKHFLHSKTLKRA 1001
Query: 1100 REVRSQLLDILKTLKIPLTSSGHDFDVVRKAICSAYFHNAARLKGVGEYINCRNGMPCHL 1159
R++R QL++I+ KI L S D+D+VR+ +CSAYFH AA KG+GEY++ R+GMPCHL
Sbjct: 1002 RDIRQQLVEIMSKQKISLESVS-DWDIVRRVLCSAYFHQAACAKGIGEYVHLRSGMPCHL 1060
Query: 1160 HPSSAIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFFSVKD---SDTSM 1216
H +S++YGLGY P+YV+YHEL+LT+KEYM T+V+P WL+E G +++SVK+ ++T
Sbjct: 1061 HVTSSLYGLGYLPDYVIYHELVLTSKEYMNIVTSVDPYWLAEFGGVYYSVKERFRNETES 1120
Query: 1217 LEH---KKKQKESKTAMEEEMENLRKI 1240
+ K Q +++ A + E++ +K+
Sbjct: 1121 YDRVFSSKPQLDAQIAADRELDAKQKL 1147
Score = 54 (24.1 bits), Expect = 7.6e-242, Sum P(2) = 7.6e-242
Identities = 52/211 (24%), Positives = 77/211 (36%)
Query: 28 GLFVPNKERPIFRAPGAKAQSGLGVRAVEKGGG-SQIDDGFKVPRVASVAASIDEEEKSE 86
GL + N+ R P K+Q GL V AV+K SQ++ ++ +V E + E
Sbjct: 97 GLVLSNRSGLKGREP-KKSQLGLDVLAVQKKKEKSQVEGRSELSQV--------ENDSLE 147
Query: 87 SSG-IDEV-VSNATNGKRSHASRRYRETSARDITDAENPMAVGRAGETAGTHRSN-EHAY 143
S G D V N H + +S D + E+ R + SN E +
Sbjct: 148 SIGNYDRVEFKRPKNPHEKHFRPLRQRSSVDDHQEFESEDDKYRRNSYSSWSGSNFESSN 207
Query: 144 VEXXXXXXXXXXXXXXXXRHDRDDRGSERKYLKDDTRSESRGPSRRDNYDSKGRYRGREA 203
R +R GS R D S S +Y S G + +A
Sbjct: 208 GSNRRRYRTQMEEPLSSKRRNRFGNGSRR-----DVDSSKY--SHDSDY-SYGAHSSWDA 259
Query: 204 RDRDEPEYGGEYGRKRSKYDGTRRTPGRSDW 234
RD + PE E R +++ + R DW
Sbjct: 260 RDVEYPEEDPESKADRQRWEEEQAHLDR-DW 289
>ZFIN|ZDB-GENE-050809-39 [details] [associations]
symbol:dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide
8" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0051301 "cell division" evidence=IMP] [GO:0060215
"primitive hemopoiesis" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0070054 "mRNA splicing, via endonucleolytic
cleavage and ligation" evidence=IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-050809-39 GO:GO:0005524 GO:GO:0005634 GO:GO:0051301
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN CTD:1659
GO:GO:0060215 InterPro:IPR013957 Pfam:PF08648 EMBL:AL833789
IPI:IPI00498887 RefSeq:XP_002663993.1 UniGene:Dr.159472
ProteinModelPortal:E7F7E3 Ensembl:ENSDART00000066282 GeneID:606595
KEGG:dre:606595 NextBio:20892459 Bgee:E7F7E3 GO:GO:0070054
Uniprot:E7F7E3
Length = 1210
Score = 1854 (657.7 bits), Expect = 9.6e-198, Sum P(2) = 9.6e-198
Identities = 387/824 (46%), Positives = 528/824 (64%)
Query: 413 QSKKLSQITADNHQWEERQLLRSGAVRGTE---------LSTEFDDEEEHKVILLVHDTK 463
+ K+L++I+ D +WE +Q++ + + E + + DDEE+ + + + + +
Sbjct: 377 ERKRLTKIS-DPEKWEIKQMIAANVLSKEEFPDFDEETGILPKVDDEEDEDLEIELVEEE 435
Query: 464 PPFLDGRIVFTKQAEPVMPIKDPTSDMAIISRKGSALVREIREKQTQNKSRQRFWELAGS 523
PPFL G + PV +K+P ++ + SAL +E RE K QR E+
Sbjct: 436 PPFLRGHTKQSMDMSPVKIVKNPDGSLSQAAMMQSALAKERREV----KQAQREAEMDSI 491
Query: 524 QMG-NILGVKKTAEQVDADTAVVGEQGEIDFREDA-KFSQHMKKGEAVSDFAKSK-TLAE 580
MG N V + VD +G D ++ +H G S K++ ++ E
Sbjct: 492 PMGLNKHWVDPLPD-VDGRQIAANMRGIGMMPNDIPEWKKHAFGGNKASYGKKTQLSILE 550
Query: 581 QRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNGIVGCTQPRR 640
QR+ LPI+ ++++L+Q + +NQ GETGSGKTTQ+TQYL E GYTT G +GCTQPRR
Sbjct: 551 QRESLPIYKLKEQLIQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTTRGKIGCTQPRR 610
Query: 641 VAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDSDLDKYR 700
VAAMSVAKRVSEE LG +VGY IRFED T P T+IKYMTDG+LLRE L D DL +Y
Sbjct: 611 VAAMSVAKRVSEEYGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLGQYA 670
Query: 701 VIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPIFHIPGR 760
+I++DEAHER++ TDVLFG+LKK V +R D KLIVTSATL+A KFS +F PIF IPGR
Sbjct: 671 IIMLDEAHERTIHTDVLFGLLKKTVQKRTDMKLIVTSATLDAVKFSQYFYEAPIFTIPGR 730
Query: 761 TFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQL 820
T+PV LY+K P DY++A++ M IH+T PPGDIL+F+TGQ+EI+ AC L ERM+ L
Sbjct: 731 TYPVEVLYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSL 790
Query: 821 ISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVID 880
+VPEL+ILP+YS LP+++Q +IF+ A G+RK ++ATNIAETSLT+DGI+YV+D
Sbjct: 791 ----GPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVD 846
Query: 881 TGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSP 940
G+ K KVYN K G+D L V P+S CYRLYTE AY +EML +
Sbjct: 847 PGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTN 906
Query: 941 VPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNVGALTDL 1000
VPEIQRTNL + V FDFMD PP E ++ +M QL+ LGAL++ G LT L
Sbjct: 907 VPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRL 966
Query: 1001 GWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAAREKFF 1060
G +M EFPL+P L KML+M LGC +E+LTIVSMLSV +VF+RPKD+ +D + KF
Sbjct: 967 GRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFH 1026
Query: 1061 VQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQLLDILKTLKIPLTSS 1120
E DHLTLL VY WK +++ WC E+++ +SLR+A+++R Q+L I+ K+ + S
Sbjct: 1027 QPEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSC 1086
Query: 1121 GHDFDVVRKAICSAYFHNAARLKGVGEYINCRNGMPCHLHPSSAIYGLGYTPEYVVYHEL 1180
G V+KAICS +F NAA+ Y + ++HPSSA++ PE+VVYHEL
Sbjct: 1087 GKATVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNR--QPEWVVYHEL 1144
Query: 1181 ILTTKEYMQCATAVEPQWLSELGPMFFSVKDSDTSMLEHKKKQK 1224
+LTTKEYM+ T ++P+WL E P FF V D T + + KK+Q+
Sbjct: 1145 VLTTKEYMREVTTIDPRWLVEFAPAFFKVSDP-TRLSKQKKQQR 1187
Score = 83 (34.3 bits), Expect = 9.6e-198, Sum P(2) = 9.6e-198
Identities = 28/88 (31%), Positives = 40/88 (45%)
Query: 162 RHDRDDRGSERKYLKDDTRSESRGPSR-RDNYDSKGRYRGREARDRDEPEY-GGEYGRK- 218
+H + S RK + +RS R R RD + R R R R R E R+
Sbjct: 154 KHRSETSSSSRKKRRSRSRSRDRDRDRDRDRERDRDRDRRRRHRSRSRSRSRSNERDRRK 213
Query: 219 -RSKYDG-TR-RTPGRSDWDDGRWEWED 243
RS++ +R R+P R+D D G W+D
Sbjct: 214 RRSRWHSRSRSRSPARTDRDKGSDRWKD 241
Score = 58 (25.5 bits), Expect = 4.2e-195, Sum P(2) = 4.2e-195
Identities = 14/49 (28%), Positives = 24/49 (48%)
Query: 162 RHDRDDRGSERKYLKDDTRSESRGPSRRDNYDSKGRYRGREARDRDEPE 210
R ++R ++ + +RS SR P+R D R++ + DR PE
Sbjct: 203 RSRSNERDRRKRRSRWHSRSRSRSPARTDRDKGSDRWKDKHV-DRPPPE 250
Score = 58 (25.5 bits), Expect = 4.2e-195, Sum P(2) = 4.2e-195
Identities = 31/120 (25%), Positives = 42/120 (35%)
Query: 78 SIDEEEKSESSGIDEVVSNATNGKRSHASRRYRETSA-RDIT-DAENPMAVGRAGETAGT 135
S+ E S S E S++ +RS + R R+ RD D + +
Sbjct: 144 SVSGTEPSSSKHRSETSSSSRKKRRSRSRSRDRDRDRDRDRERDRDRDRRRRHRSRSRSR 203
Query: 136 HRSNEHAYVEXXXXXXXXXXXXXXXXRHDRDDRGSERKYLKDDTRSESRGPSRRDNYDSK 195
RSNE R DRD +GS+R K R PS D Y+ K
Sbjct: 204 SRSNERDR-RKRRSRWHSRSRSRSPARTDRD-KGSDRWKDKHVDRPPPEEPSVADIYNGK 261
Score = 56 (24.8 bits), Expect = 6.9e-195, Sum P(2) = 6.9e-195
Identities = 23/81 (28%), Positives = 36/81 (44%)
Query: 180 RSESRGPSRRDNYDSKGRYRGREARDRDEPEYGGEYGRKRSKYDGTRRTPGRSDWDDGRW 239
RSE+ SR+ S+ R R R+ RDRD +R ++ R+ RS+ D R
Sbjct: 156 RSETSSSSRKKRR-SRSRSRDRD-RDRDRDRERDRDRDRRRRHRSRSRSRSRSNERDRR- 212
Query: 240 EWEDTPRREGYSNSSKRYQPS 260
RR + + S+ P+
Sbjct: 213 -----KRRSRWHSRSRSRSPA 228
Score = 39 (18.8 bits), Expect = 4.3e-193, Sum P(2) = 4.3e-193
Identities = 10/33 (30%), Positives = 14/33 (42%)
Query: 177 DDTRSESRGPSRRDNYDSKGRYRGREARDRDEP 209
D E P+RR N +G+ R+ D P
Sbjct: 329 DQDTGEDLNPNRRRNVGGEGQEESA-MRNPDRP 360
>TAIR|locus:2088847 [details] [associations]
symbol:AT3G26560 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA;ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0000226 "microtubule cytoskeleton
organization" evidence=RCA] [GO:0000911 "cytokinesis by cell plate
formation" evidence=RCA] [GO:0006486 "protein glycosylation"
evidence=RCA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005829 GO:GO:0005739 GO:GO:0009506 GO:GO:0005524
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0008380
GO:GO:0006397 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 EMBL:X98130
EMBL:X97970 EMBL:AB028611 IPI:IPI00530246 RefSeq:NP_189288.1
UniGene:At.46918 ProteinModelPortal:Q38953 SMR:Q38953 STRING:Q38953
PaxDb:Q38953 PRIDE:Q38953 EnsemblPlants:AT3G26560.1 GeneID:822264
KEGG:ath:AT3G26560 GeneFarm:1800 TAIR:At3g26560 InParanoid:Q38953
KO:K12818 OMA:NAWCYEN PhylomeDB:Q38953 ProtClustDB:CLSN2684863
Genevestigator:Q38953 GermOnline:AT3G26560 Uniprot:Q38953
Length = 1168
Score = 1839 (652.4 bits), Expect = 9.8e-196, Sum P(2) = 9.8e-196
Identities = 386/872 (44%), Positives = 556/872 (63%)
Query: 376 DTDSSSFILGDDASYQKKEVELAKRLVRKDGSRM----SLAQSKKLSQITADNHQWEERQ 431
D D SS + SY+ K+ ++ K + G R+ +A S++ + + +WE +Q
Sbjct: 301 DEDDSS---RSNPSYRTKDGQVTKTGI--SGIRIVEENDVAPSRRPLKKMSSPERWEAKQ 355
Query: 432 LLRSGAVRGTELSTEFDD-------EE--EHKVILLVHDTKPPFLDGRIVFTKQAEPVMP 482
L+ SG +R E +D EE E ++ + +++ +P FL G+ ++ PV
Sbjct: 356 LIASGVLRVDEFPMYDEDGDGMLYQEEGAEEELEIEMNEDEPAFLQGQTRYSVDMSPVKI 415
Query: 483 IKDPTSDMAIISRKGSALV---REIREKQTQN------KSRQRFWELAGSQMGNILGVKK 533
K+P ++ + SAL RE+RE+Q + K R WE + G +
Sbjct: 416 FKNPEGSLSRAAALQSALTKERREMREQQQRTMLDSIPKDLNRPWEDPMPETGE----RH 471
Query: 534 TAEQVDADTAVVGEQGEIDFREDAKFSQHMKKGEAVSDFAKSK-TLAEQRQYLPIFSVRD 592
A+++ + E +++DA F + G+ +SK ++ EQR+ LPI+ ++
Sbjct: 472 LAQELRGVGLSAYDMPE--WKKDA-FGKTPTFGQ------RSKLSIQEQRESLPIYKLKK 522
Query: 593 ELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNGIVGCTQPRRVAAMSVAKRVSE 652
EL+Q + +NQ GETGSGKTTQ+TQYL E GYTT G +GCTQPRRVAAMSVAKRV+E
Sbjct: 523 ELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTKGKIGCTQPRRVAAMSVAKRVAE 582
Query: 653 EMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDSDLDKYRVIVMDEAHERSL 712
E LG++VGYAIRFED TGP T+IKYMTDG+LLRE L D +L +Y VI++DEAHER++
Sbjct: 583 EFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTI 642
Query: 713 STDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPIFHIPGRTFPVNTLYSKTP 772
TDVLFG+LKK++ RR D +LIVTSATL+A+KFS +F + IF IPGRTFPV LY+K P
Sbjct: 643 HTDVLFGLLKKLMKRRLDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQP 702
Query: 773 CEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELL 832
DY++AA+ + IH+T P GDIL+F+TGQ+EI++AC +L ERM+ L + VPEL+
Sbjct: 703 ETDYLDAALITVLQIHLTEPEGDILVFLTGQEEIDSACQSLYERMKGL----GKNVPELI 758
Query: 833 ILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPK 892
ILP+YS LP+++Q++IF+ G RK +VATNIAE SLT+DGI+YV+D G+ K VYNPK
Sbjct: 759 ILPVYSALPSEMQSRIFDPPPPGKRKVVVATNIAEASLTIDGIYYVVDPGFAKQNVYNPK 818
Query: 893 MGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNV 952
G+++L + P+S CYRLYTESAY NEM P+ +PEIQR NLG
Sbjct: 819 QGLESLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMPPTSIPEIQRINLGMT 878
Query: 953 VXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPP 1012
FDFMDPP + ++++M QL+ LGAL+ G LT LG KM EFPL+PP
Sbjct: 879 TLTMKAMGINDLLSFDFMDPPQPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLEPP 938
Query: 1013 LAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAAREKFFVQESDHLTLLYV 1072
L+KMLL LGC DE+LT+++M+ ++F+RP+++ ++D R KFF E DHLTLL V
Sbjct: 939 LSKMLLASVDLGCSDEILTMIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAV 998
Query: 1073 YQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQLLDILKTLKIPLTSSGHDFDVVRKAIC 1132
Y+ WK + G WC E+++ +SLR+A++VR QLL I+ K+ + ++G +F +RKAI
Sbjct: 999 YEAWKAKNFSGPWCFENFIQSRSLRRAQDVRKQLLSIMDKYKLDVVTAGKNFTKIRKAIT 1058
Query: 1133 SAYFHNAARLKGVGEYINCRNGMPCHLHPSSAIYGLGYTPEYVVYHELILTTKEYMQCAT 1192
+ +F + AR Y P ++HPSSA++ P++V+YH+L++TTKEYM+ T
Sbjct: 1059 AGFFFHGARKDPQEGYRTLVENQPVYIHPSSALFQR--QPDWVIYHDLVMTTKEYMREVT 1116
Query: 1193 AVEPQWLSELGPMFFSVKDSDTSMLEHKKKQK 1224
++P+WL EL P FF V D T M + K++++
Sbjct: 1117 VIDPKWLVELAPRFFKVSDP-TKMSKRKRQER 1147
Score = 79 (32.9 bits), Expect = 9.8e-196, Sum P(2) = 9.8e-196
Identities = 28/87 (32%), Positives = 35/87 (40%)
Query: 171 ERKYLKDDTRSESRGPSRRDNYDSKGRYRG-REARDRD-EPEYGGEYGRKRSKYDGTRRT 228
ER+ +D R R S RD + R R R R RD E G E G R + D R
Sbjct: 120 ERRREEDRNRDRDRRESGRDRDRDRNRDRDDRRDRHRDRERNRGDEEGEDR-RSDRRHRE 178
Query: 229 PGRSDWDDGRWEWEDTPRREGYSNSSK 255
GR D +G D ++ Y K
Sbjct: 179 RGRGDGGEGEDRRRDRRAKDEYVEEDK 205
Score = 64 (27.6 bits), Expect = 3.8e-194, Sum P(2) = 3.8e-194
Identities = 17/45 (37%), Positives = 22/45 (48%)
Query: 162 RHDRDDRGSERKYLKDDTRSESRGPSRRDNYDSKGRYRGREARDR 206
R DR DR +R+ + D E R RR + +GR G E DR
Sbjct: 148 RDDRRDRHRDRERNRGDEEGEDRRSDRR--HRERGRGDGGEGEDR 190
Score = 50 (22.7 bits), Expect = 1.1e-192, Sum P(2) = 1.1e-192
Identities = 15/53 (28%), Positives = 24/53 (45%)
Query: 166 DDRGSERKYLKDDTRSESRGPSRRDNYDSKGRYRGREARDRDEPEYGGEY-GR 217
+DR S+R++ + G RR + +K Y + +EPE Y GR
Sbjct: 168 EDRRSDRRHRERGRGDGGEGEDRRRDRRAKDEYVEEDKGGANEPELYQVYKGR 220
>UNIPROTKB|F1S1H3 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN CTD:1659 EMBL:FP102477 RefSeq:XP_003131427.2
Ensembl:ENSSSCT00000018917 GeneID:100517118 KEGG:ssc:100517118
Uniprot:F1S1H3
Length = 1212
Score = 1850 (656.3 bits), Expect = 1.6e-195, Sum P(2) = 1.6e-195
Identities = 388/827 (46%), Positives = 532/827 (64%)
Query: 413 QSKKLSQITADNHQWEERQLLRSGAVRGTE---------LSTEFDDEEEHKVILLVHDTK 463
+ K+L++I+ D +WE +Q++ + + E + + DDEE+ + + + + +
Sbjct: 379 ERKRLTRIS-DPEKWEIKQMIAANVLSKEEFPDFDEETGILPKVDDEEDEDLEIELVEEE 437
Query: 464 PPFLDGRIVFTKQAEPVMPIKDPTSDMAIISRKGSALVREIREKQTQNKSRQRFWELAGS 523
PPFL G + P+ +K+P ++ + SAL +E RE K QR E+
Sbjct: 438 PPFLRGHTKQSMDMSPIKIVKNPDGSLSQAAMMQSALAKERREL----KQAQREAEMDSI 493
Query: 524 QMG-NILGVKKT--AE--QVDADTAVVGEQGEIDFREDAKFSQHMKKGEAVSDFAKSK-T 577
MG N V AE Q+ A+ +G D E + +H G S K++ +
Sbjct: 494 PMGLNKHWVDPLPDAEGRQIAANMRGIGMMPN-DIPE---WKKHAFGGNKASYGKKTQMS 549
Query: 578 LAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNGIVGCTQ 637
+ EQR+ LPI+ ++++L+Q + +NQ GETGSGKTTQ+TQYL E GYT+ G +GCTQ
Sbjct: 550 IIEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIGCTQ 609
Query: 638 PRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDSDLD 697
PRRVAAMSVAKRVSEE LG +VGY IRFED T P T+IKYMTDG+LLRE L D DL
Sbjct: 610 PRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLT 669
Query: 698 KYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPIFHI 757
+Y +I++DEAHER++ TDVLFG+LKK V +R+D KLIVTSATL+A KFS +F PIF I
Sbjct: 670 QYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTI 729
Query: 758 PGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERM 817
PGRT+PV LY+K P DY++A++ M IH+T PPGDIL+F+TGQ+EI+ AC L ERM
Sbjct: 730 PGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERM 789
Query: 818 EQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFY 877
+ L +VPEL+ILP+YS LP+++Q +IF+ A G+RK ++ATNIAETSLT+DGI+Y
Sbjct: 790 KSL----GPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYY 845
Query: 878 VIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEML 937
V+D G+ K KVYN K G+D L V P+S CYRLYTE AY +EML
Sbjct: 846 VVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEML 905
Query: 938 PSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNVGAL 997
+ VPEIQRTNL + V FDFMD PP E ++ +M QL+ LGAL++ G L
Sbjct: 906 TTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLL 965
Query: 998 TDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAARE 1057
T LG +M EFPL+P L KML+M LGC +E+LTIVSMLSV +VF+RPKD+ +D +
Sbjct: 966 TRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKA 1025
Query: 1058 KFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQLLDILKTLKIPL 1117
KF E DHLTLL VY WK +++ WC E+++ +SLR+A+++R Q+L I+ K+ +
Sbjct: 1026 KFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDV 1085
Query: 1118 TSSGHDFDVVRKAICSAYFHNAARLKGVGEYINCRNGMPCHLHPSSAIYGLGYTPEYVVY 1177
S G V+KAICS +F NAA+ Y + ++HPSSA++ PE+VVY
Sbjct: 1086 VSCGKSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNR--QPEWVVY 1143
Query: 1178 HELILTTKEYMQCATAVEPQWLSELGPMFFSVKDSDTSMLEHKKKQK 1224
HEL+LTTKEYM+ T ++P+WL E P FF V D T + + KK+Q+
Sbjct: 1144 HELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDP-TKLSKQKKQQR 1189
Score = 66 (28.3 bits), Expect = 1.6e-195, Sum P(2) = 1.6e-195
Identities = 27/67 (40%), Positives = 32/67 (47%)
Query: 164 DRD-DRGSERKYLKDDTRSESRGPSRRDNYDSKGRYRGREA-----RDR-DEPEYGGE-Y 215
DRD DR +R + K RS SR +R N K RYR R RDR D +YG
Sbjct: 181 DRDRDRERDRDH-KRRHRSRSRSRTRERN-KGKSRYRSRSRSQSPPRDRKDRDKYGERNL 238
Query: 216 GRKRSKY 222
R R K+
Sbjct: 239 DRWRDKH 245
Score = 60 (26.2 bits), Expect = 6.9e-195, Sum P(2) = 6.9e-195
Identities = 23/75 (30%), Positives = 32/75 (42%)
Query: 162 RHDRDDRGSERKYLKDDTRSESRGPSRRDNYDSKGRYRGRE-ARDRDEPEYGGEYGRKRS 220
RH RD ++ K +R R R + D K R+R R +R R+ + Y R RS
Sbjct: 161 RH-RDTEHRDKTKKKKRSRERDRDRDRERDRDHKRRHRSRSRSRTRERNKGKSRY-RSRS 218
Query: 221 KYDGTRRTPGRSDWD 235
+ R R D D
Sbjct: 219 RSQSPPRD--RKDRD 231
Score = 48 (22.0 bits), Expect = 1.3e-193, Sum P(2) = 1.3e-193
Identities = 16/56 (28%), Positives = 24/56 (42%)
Query: 167 DRGSERKYLKDDTRSESRGPSRRDNYDSKGRYRGREAR-DR---DEPEYGGEYGRK 218
++G R + ++S R RD Y + R R+ DR +EP G Y K
Sbjct: 208 NKGKSRYRSRSRSQSPPRDRKDRDKYGERNLDRWRDKHVDRPPPEEPAIGDIYNGK 263
>MGI|MGI:1306823 [details] [associations]
symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide 8"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
MGI:MGI:1306823 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AL590994 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 InterPro:IPR022967 SMART:SM00316 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN CTD:1659
OrthoDB:EOG4D26P2 EMBL:BC132445 EMBL:AL591436 IPI:IPI00461304
RefSeq:NP_659080.2 UniGene:Mm.28186 ProteinModelPortal:A2A4P0
SMR:A2A4P0 PaxDb:A2A4P0 PRIDE:A2A4P0 DNASU:217207
Ensembl:ENSMUST00000039152 GeneID:217207 KEGG:mmu:217207
UCSC:uc007lpr.1 InParanoid:A2A4P0 NextBio:375641 Bgee:A2A4P0
Genevestigator:A2A4P0 Uniprot:A2A4P0
Length = 1244
Score = 1850 (656.3 bits), Expect = 2.0e-195, Sum P(2) = 2.0e-195
Identities = 388/827 (46%), Positives = 532/827 (64%)
Query: 413 QSKKLSQITADNHQWEERQLLRSGAVRGTE---------LSTEFDDEEEHKVILLVHDTK 463
+ K+L++I+ D +WE +Q++ + + E + + DDEE+ + + + + +
Sbjct: 411 ERKRLTRIS-DPEKWEIKQMIAANVLSKEEFPDFDEETGILPKVDDEEDEDLEIELVEEE 469
Query: 464 PPFLDGRIVFTKQAEPVMPIKDPTSDMAIISRKGSALVREIREKQTQNKSRQRFWELAGS 523
PPFL G + P+ +K+P ++ + SAL +E RE K QR E+
Sbjct: 470 PPFLRGHTKQSMDMSPIKIVKNPDGSLSQAAMMQSALAKERREL----KQAQREAEMDSI 525
Query: 524 QMG-NILGVKKT--AE--QVDADTAVVGEQGEIDFREDAKFSQHMKKGEAVSDFAKSK-T 577
MG N V AE Q+ A+ +G D E + +H G S K++ +
Sbjct: 526 PMGLNKHWVDPLPDAEGRQIAANMRGIGMMPN-DIPE---WKKHAFGGNKASYGKKTQMS 581
Query: 578 LAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNGIVGCTQ 637
+ EQR+ LPI+ ++++L+Q + +NQ GETGSGKTTQ+TQYL E GYT+ G +GCTQ
Sbjct: 582 ILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIGCTQ 641
Query: 638 PRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDSDLD 697
PRRVAAMSVAKRVSEE LG +VGY IRFED T P T+IKYMTDG+LLRE L D DL
Sbjct: 642 PRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLT 701
Query: 698 KYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPIFHI 757
+Y +I++DEAHER++ TDVLFG+LKK V +R+D KLIVTSATL+A KFS +F PIF I
Sbjct: 702 QYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTI 761
Query: 758 PGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERM 817
PGRT+PV LY+K P DY++A++ M IH+T PPGDIL+F+TGQ+EI+ AC L ERM
Sbjct: 762 PGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERM 821
Query: 818 EQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFY 877
+ L +VPEL+ILP+YS LP+++Q +IF+ A G+RK ++ATNIAETSLT+DGI+Y
Sbjct: 822 KSL----GPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYY 877
Query: 878 VIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEML 937
V+D G+ K KVYN K G+D L V P+S CYRLYTE AY +EML
Sbjct: 878 VVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEML 937
Query: 938 PSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNVGAL 997
+ VPEIQRTNL + V FDFMD PP E ++ +M QL+ LGAL++ G L
Sbjct: 938 TTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLL 997
Query: 998 TDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAARE 1057
T LG +M EFPL+P L KML+M LGC +E+LTIVSMLSV +VF+RPKD+ +D +
Sbjct: 998 TRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKA 1057
Query: 1058 KFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQLLDILKTLKIPL 1117
KF E DHLTLL VY WK +++ WC E+++ +SLR+A+++R Q+L I+ K+ +
Sbjct: 1058 KFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDV 1117
Query: 1118 TSSGHDFDVVRKAICSAYFHNAARLKGVGEYINCRNGMPCHLHPSSAIYGLGYTPEYVVY 1177
S G V+KAICS +F NAA+ Y + ++HPSSA++ PE+VVY
Sbjct: 1118 VSCGKSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNR--QPEWVVY 1175
Query: 1178 HELILTTKEYMQCATAVEPQWLSELGPMFFSVKDSDTSMLEHKKKQK 1224
HEL+LTTKEYM+ T ++P+WL E P FF V D T + + KK+Q+
Sbjct: 1176 HELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDP-TKLSKQKKQQR 1221
Score = 65 (27.9 bits), Expect = 2.0e-195, Sum P(2) = 2.0e-195
Identities = 30/91 (32%), Positives = 39/91 (42%)
Query: 164 DRD-DRGSERKYLKDDTRSESRGPSRRDNYDSKGRYRGREARDRDEPEYGGEYGRKRSKY 222
DRD DR +R +D R R R + D R R RE RDR+ R RS
Sbjct: 181 DRDRDRDRDRD--RDRDRDRDRDKDRERDRD---RERDRE-RDRERDHKRRHRSRSRSHS 234
Query: 223 DGTRRTPGRSDWDD-GRWE--WEDTPRREGY 250
RT G+S + R + ++D RE Y
Sbjct: 235 RTRERTKGKSRYRSRSRSQSPFKDRKDREKY 265
Score = 57 (25.1 bits), Expect = 1.4e-194, Sum P(2) = 1.4e-194
Identities = 24/79 (30%), Positives = 32/79 (40%)
Query: 180 RSESRGPSRRDNYDSKGRYRGREA-RDRD-EPEYGGEYGRKRSKYDGTRRTPGRSDWDDG 237
+ + R P RD K R R R+ RDRD + + + R R K D R D +
Sbjct: 159 QEKQRDPEHRDRTKKKKRSRSRDRDRDRDRDRDRDRDRDRDRDK-DRERDRDRERDRERD 217
Query: 238 RWEWEDTPRREGYSNSSKR 256
R E + R S S R
Sbjct: 218 R-ERDHKRRHRSRSRSHSR 235
>RGD|1310723 [details] [associations]
symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide 8"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:1310723
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316
HOVERGEN:HBG039428 GeneTree:ENSGT00700000104241 KO:K12818 CTD:1659
OrthoDB:EOG4D26P2 UniGene:Rn.108087 EMBL:AY383690 IPI:IPI00370026
RefSeq:NP_001041309.1 SMR:Q6TXG4 Ensembl:ENSRNOT00000048140
GeneID:287727 KEGG:rno:287727 UCSC:RGD:1310723 NextBio:626887
Genevestigator:Q6TXG4 Uniprot:Q6TXG4
Length = 1210
Score = 1850 (656.3 bits), Expect = 5.4e-195, Sum P(2) = 5.4e-195
Identities = 388/827 (46%), Positives = 532/827 (64%)
Query: 413 QSKKLSQITADNHQWEERQLLRSGAVRGTE---------LSTEFDDEEEHKVILLVHDTK 463
+ K+L++I+ D +WE +Q++ + + E + + DDEE+ + + + + +
Sbjct: 356 ERKRLTRIS-DPEKWEIKQMIAANVLSKEEFPDFDEETGILPKVDDEEDEDLEIELVEEE 414
Query: 464 PPFLDGRIVFTKQAEPVMPIKDPTSDMAIISRKGSALVREIREKQTQNKSRQRFWELAGS 523
PPFL G + P+ +K+P ++ + SAL +E RE K QR E+
Sbjct: 415 PPFLRGHTKQSMDMSPIKIVKNPDGSLSQAAMMQSALAKERREL----KQAQREAEMDSI 470
Query: 524 QMG-NILGVKKT--AE--QVDADTAVVGEQGEIDFREDAKFSQHMKKGEAVSDFAKSK-T 577
MG N V AE Q+ A+ +G D E + +H G S K++ +
Sbjct: 471 PMGLNKHWVDPLPDAEGRQIAANMRGIGMMPN-DIPE---WKKHAFGGNKASYGKKTQMS 526
Query: 578 LAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNGIVGCTQ 637
+ EQR+ LPI+ ++++L+Q + +NQ GETGSGKTTQ+TQYL E GYT+ G +GCTQ
Sbjct: 527 ILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIGCTQ 586
Query: 638 PRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDSDLD 697
PRRVAAMSVAKRVSEE LG +VGY IRFED T P T+IKYMTDG+LLRE L D DL
Sbjct: 587 PRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLT 646
Query: 698 KYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPIFHI 757
+Y +I++DEAHER++ TDVLFG+LKK V +R+D KLIVTSATL+A KFS +F PIF I
Sbjct: 647 QYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTI 706
Query: 758 PGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERM 817
PGRT+PV LY+K P DY++A++ M IH+T PPGDIL+F+TGQ+EI+ AC L ERM
Sbjct: 707 PGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERM 766
Query: 818 EQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFY 877
+ L +VPEL+ILP+YS LP+++Q +IF+ A G+RK ++ATNIAETSLT+DGI+Y
Sbjct: 767 KSL----GPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYY 822
Query: 878 VIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEML 937
V+D G+ K KVYN K G+D L V P+S CYRLYTE AY +EML
Sbjct: 823 VVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEML 882
Query: 938 PSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNVGAL 997
+ VPEIQRTNL + V FDFMD PP E ++ +M QL+ LGAL++ G L
Sbjct: 883 TTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLL 942
Query: 998 TDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAARE 1057
T LG +M EFPL+P L KML+M LGC +E+LTIVSMLSV +VF+RPKD+ +D +
Sbjct: 943 TRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKA 1002
Query: 1058 KFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQLLDILKTLKIPL 1117
KF E DHLTLL VY WK +++ WC E+++ +SLR+A+++R Q+L I+ K+ +
Sbjct: 1003 KFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDV 1062
Query: 1118 TSSGHDFDVVRKAICSAYFHNAARLKGVGEYINCRNGMPCHLHPSSAIYGLGYTPEYVVY 1177
S G V+KAICS +F NAA+ Y + ++HPSSA++ PE+VVY
Sbjct: 1063 VSCGKSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNR--QPEWVVY 1120
Query: 1178 HELILTTKEYMQCATAVEPQWLSELGPMFFSVKDSDTSMLEHKKKQK 1224
HEL+LTTKEYM+ T ++P+WL E P FF V D T + + KK+Q+
Sbjct: 1121 HELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDP-TKLSKQKKQQR 1166
Score = 61 (26.5 bits), Expect = 5.4e-195, Sum P(2) = 5.4e-195
Identities = 24/64 (37%), Positives = 31/64 (48%)
Query: 164 DRD-DRGSERKYLKDDTRSESRGPSR-RD-NYDSKGRYRGRE---ARDRDEPEYGGEYGR 217
DRD DR +R KD R R R RD + D K R+R R +R R+ + Y R
Sbjct: 134 DRDRDRDRDRDRDKDRERDRDRERDRERDRDRDHKRRHRSRSRSHSRTRERAKGKSRY-R 192
Query: 218 KRSK 221
RS+
Sbjct: 193 SRSR 196
Score = 61 (26.5 bits), Expect = 5.4e-195, Sum P(2) = 5.4e-195
Identities = 26/87 (29%), Positives = 35/87 (40%)
Query: 168 RGSERKYLKDDTRSESRGPSR-RDNYDSKGRYRGREARDRDEPEYGGEYGRKRSKYDGTR 226
R +R +D R R R +D + R R RE RDRD R RS
Sbjct: 125 RSRDRDRDRDRDRDRDRDRDRDKDRERDRDRERDRE-RDRDRDHKRRHRSRSRSHSRTRE 183
Query: 227 RTPGRSDWDD-GRWE--WEDTPRREGY 250
R G+S + R + ++D RE Y
Sbjct: 184 RAKGKSRYRSRSRSQSPFKDRKDREKY 210
Score = 59 (25.8 bits), Expect = 8.8e-195, Sum P(2) = 8.8e-195
Identities = 22/61 (36%), Positives = 31/61 (50%)
Query: 176 KDDTRSESRGPSR-RDNYDSKGRYRGREA-RDRD-EPEYGGEYGRKRSK-YDGTRRTPGR 231
+D T+ + R SR RD + R R R+ RD+D E + E R+R + D RR R
Sbjct: 115 RDRTKKKKRSRSRDRDRDRDRDRDRDRDRDRDKDRERDRDRERDRERDRDRDHKRRHRSR 174
Query: 232 S 232
S
Sbjct: 175 S 175
>UNIPROTKB|D4A805 [details] [associations]
symbol:Dhx8 "Protein Dhx8" species:10116 "Rattus
norvegicus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1310723 GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 EMBL:CH473948 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
OMA:NAWCYEN IPI:IPI00567810 UniGene:Rn.108087
Ensembl:ENSRNOT00000028198 Uniprot:D4A805
Length = 1242
Score = 1850 (656.3 bits), Expect = 5.4e-195, Sum P(2) = 5.4e-195
Identities = 388/827 (46%), Positives = 532/827 (64%)
Query: 413 QSKKLSQITADNHQWEERQLLRSGAVRGTE---------LSTEFDDEEEHKVILLVHDTK 463
+ K+L++I+ D +WE +Q++ + + E + + DDEE+ + + + + +
Sbjct: 409 ERKRLTRIS-DPEKWEIKQMIAANVLSKEEFPDFDEETGILPKVDDEEDEDLEIELVEEE 467
Query: 464 PPFLDGRIVFTKQAEPVMPIKDPTSDMAIISRKGSALVREIREKQTQNKSRQRFWELAGS 523
PPFL G + P+ +K+P ++ + SAL +E RE K QR E+
Sbjct: 468 PPFLRGHTKQSMDMSPIKIVKNPDGSLSQAAMMQSALAKERREL----KQAQREAEMDSI 523
Query: 524 QMG-NILGVKKT--AE--QVDADTAVVGEQGEIDFREDAKFSQHMKKGEAVSDFAKSK-T 577
MG N V AE Q+ A+ +G D E + +H G S K++ +
Sbjct: 524 PMGLNKHWVDPLPDAEGRQIAANMRGIGMMPN-DIPE---WKKHAFGGNKASYGKKTQMS 579
Query: 578 LAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNGIVGCTQ 637
+ EQR+ LPI+ ++++L+Q + +NQ GETGSGKTTQ+TQYL E GYT+ G +GCTQ
Sbjct: 580 ILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIGCTQ 639
Query: 638 PRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDSDLD 697
PRRVAAMSVAKRVSEE LG +VGY IRFED T P T+IKYMTDG+LLRE L D DL
Sbjct: 640 PRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLT 699
Query: 698 KYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPIFHI 757
+Y +I++DEAHER++ TDVLFG+LKK V +R+D KLIVTSATL+A KFS +F PIF I
Sbjct: 700 QYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTI 759
Query: 758 PGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERM 817
PGRT+PV LY+K P DY++A++ M IH+T PPGDIL+F+TGQ+EI+ AC L ERM
Sbjct: 760 PGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERM 819
Query: 818 EQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFY 877
+ L +VPEL+ILP+YS LP+++Q +IF+ A G+RK ++ATNIAETSLT+DGI+Y
Sbjct: 820 KSL----GPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYY 875
Query: 878 VIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEML 937
V+D G+ K KVYN K G+D L V P+S CYRLYTE AY +EML
Sbjct: 876 VVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEML 935
Query: 938 PSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNVGAL 997
+ VPEIQRTNL + V FDFMD PP E ++ +M QL+ LGAL++ G L
Sbjct: 936 TTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLL 995
Query: 998 TDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAARE 1057
T LG +M EFPL+P L KML+M LGC +E+LTIVSMLSV +VF+RPKD+ +D +
Sbjct: 996 TRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKA 1055
Query: 1058 KFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQLLDILKTLKIPL 1117
KF E DHLTLL VY WK +++ WC E+++ +SLR+A+++R Q+L I+ K+ +
Sbjct: 1056 KFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDV 1115
Query: 1118 TSSGHDFDVVRKAICSAYFHNAARLKGVGEYINCRNGMPCHLHPSSAIYGLGYTPEYVVY 1177
S G V+KAICS +F NAA+ Y + ++HPSSA++ PE+VVY
Sbjct: 1116 VSCGKSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNR--QPEWVVY 1173
Query: 1178 HELILTTKEYMQCATAVEPQWLSELGPMFFSVKDSDTSMLEHKKKQK 1224
HEL+LTTKEYM+ T ++P+WL E P FF V D T + + KK+Q+
Sbjct: 1174 HELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDP-TKLSKQKKQQR 1219
Score = 61 (26.5 bits), Expect = 5.4e-195, Sum P(2) = 5.4e-195
Identities = 24/64 (37%), Positives = 31/64 (48%)
Query: 164 DRD-DRGSERKYLKDDTRSESRGPSR-RD-NYDSKGRYRGRE---ARDRDEPEYGGEYGR 217
DRD DR +R KD R R R RD + D K R+R R +R R+ + Y R
Sbjct: 187 DRDRDRDRDRDRDKDRERDRDRERDRERDRDRDHKRRHRSRSRSHSRTRERAKGKSRY-R 245
Query: 218 KRSK 221
RS+
Sbjct: 246 SRSR 249
Score = 61 (26.5 bits), Expect = 5.4e-195, Sum P(2) = 5.4e-195
Identities = 26/87 (29%), Positives = 35/87 (40%)
Query: 168 RGSERKYLKDDTRSESRGPSR-RDNYDSKGRYRGREARDRDEPEYGGEYGRKRSKYDGTR 226
R +R +D R R R +D + R R RE RDRD R RS
Sbjct: 178 RSRDRDRDRDRDRDRDRDRDRDKDRERDRDRERDRE-RDRDRDHKRRHRSRSRSHSRTRE 236
Query: 227 RTPGRSDWDD-GRWE--WEDTPRREGY 250
R G+S + R + ++D RE Y
Sbjct: 237 RAKGKSRYRSRSRSQSPFKDRKDREKY 263
Score = 59 (25.8 bits), Expect = 8.8e-195, Sum P(2) = 8.8e-195
Identities = 22/61 (36%), Positives = 31/61 (50%)
Query: 176 KDDTRSESRGPSR-RDNYDSKGRYRGREA-RDRD-EPEYGGEYGRKRSK-YDGTRRTPGR 231
+D T+ + R SR RD + R R R+ RD+D E + E R+R + D RR R
Sbjct: 168 RDRTKKKKRSRSRDRDRDRDRDRDRDRDRDRDKDRERDRDRERDRERDRDRDHKRRHRSR 227
Query: 232 S 232
S
Sbjct: 228 S 228
>GENEDB_PFALCIPARUM|MAL13P1.322 [details] [associations]
symbol:MAL13P1.322 "splicing factor,
putative" species:5833 "Plasmodium falciparum" [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
EMBL:AL844509 HOGENOM:HOG000175261 KO:K12815 RefSeq:XP_002809102.1
ProteinModelPortal:C0H5K5 EnsemblProtists:MAL13P1.322:mRNA
GeneID:813888 KEGG:pfa:MAL13P1.322 EuPathDB:PlasmoDB:PF3D7_1364300
OMA:YFHNAAK ProtClustDB:CLSZ2500787 Uniprot:C0H5K5
Length = 1151
Score = 1077 (384.2 bits), Expect = 5.8e-195, Sum P(3) = 5.8e-195
Identities = 199/399 (49%), Positives = 276/399 (69%)
Query: 813 LKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTV 872
+K++++ ++ + I PIYSQL ++ Q+KIF+K RK IV+TNIAETSLT+
Sbjct: 754 IKKKVDGDNNTNDHMIYPFYIFPIYSQLSSEQQSKIFKKYD--LRKIIVSTNIAETSLTL 811
Query: 873 DGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAY 932
DGI YVIDTGY K+KVYN +GMD LQV P+S CYRLYTE+ +
Sbjct: 812 DGIKYVIDTGYCKLKVYNQTIGMDVLQVTPISQANANQRSGRAGRTGAGICYRLYTENTF 871
Query: 933 LNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALN 992
L ++ + +PEIQR+NL NVV FDF+D P +E+I+NS+++LWVLGA+N
Sbjct: 872 LCDLYQNNIPEIQRSNLSNVVLLLKSLHVQNLFEFDFIDVPSKESIINSLHELWVLGAIN 931
Query: 993 NVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEES 1052
N G LTD+G KMV+FPLDPPL+K+++ + C E+L IVSMLS PS+F K+ E
Sbjct: 932 NEGNLTDIGRKMVQFPLDPPLSKIVIYSQNFQCTKEILIIVSMLSSPSIFLESKENNESI 991
Query: 1053 DAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQLLDILKT 1112
++ +EKF V ESDHLTLL +Y QW+ H Y WC ++++ K+L KA+EV SQL+DI+KT
Sbjct: 992 ESKKEKFTVPESDHLTLLNIYLQWRSHNYSYSWCTKNFIQYKALNKAKEVYSQLIDIIKT 1051
Query: 1113 LKIPLTSSGHDFDVVRKAICSAYFHNAARLKGVGEYINCRNGMPCHLHPSSAIYGLGYTP 1172
L I S + ++++RK ICS YFHNAA+LK EYIN R + CH+HP+S++Y +GYTP
Sbjct: 1052 LNIKNVSCDNKWELIRKTICSGYFHNAAKLKSFSEYINLRTNVSCHVHPNSSLYNIGYTP 1111
Query: 1173 EYVVYHELILTTKEYMQCATAVEPQWLSELGPMFFSVKD 1211
+YV+Y E++ TTKEYM+ T V+P+WL ELGP+FF +K+
Sbjct: 1112 DYVIYQEIVFTTKEYMRNVTTVDPEWLCELGPLFFYMKN 1150
Score = 735 (263.8 bits), Expect = 5.8e-195, Sum P(3) = 5.8e-195
Identities = 143/251 (56%), Positives = 184/251 (73%)
Query: 578 LAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNGIVGCTQ 637
L + ++ LPI+ + ELL + N GETGSGKTTQ+ QYL E+GY NGI+ CTQ
Sbjct: 472 LLKLKESLPIYKSKHELLDAVYNNNIIIIVGETGSGKTTQIVQYLYEEGYHRNGIICCTQ 531
Query: 638 PRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDSDLD 697
PRRVAA+SVA RVS EM+ ++G VGY IRFED T T I+Y+TDG+LLRETL D +LD
Sbjct: 532 PRRVAAVSVAYRVSYEMNVDIGSLVGYTIRFEDNTTKDTKIRYVTDGILLRETLNDKELD 591
Query: 698 KYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPIFHI 757
KY VI+MDEAHERS++TDVL GILK + +R D KLIVTSAT++A+KFS FFG+ PI++I
Sbjct: 592 KYSVIIMDEAHERSINTDVLLGILKNICLKRNDLKLIVTSATIDAKKFSAFFGNAPIYNI 651
Query: 758 PGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPP-----GDILIFMTGQDEIEAACFA 812
GRTF V+ Y +TPC DY+E AV++A+ IH++ GDILIFMTGQ++I A C+
Sbjct: 652 QGRTFKVHIEYLRTPCNDYIECAVQKAIQIHVSDNNYDNNFGDILIFMTGQEDINATCYL 711
Query: 813 LKERMEQLISS 823
L ER ++ S
Sbjct: 712 LSERFYEVYES 722
Score = 115 (45.5 bits), Expect = 5.8e-195, Sum P(3) = 5.8e-195
Identities = 31/136 (22%), Positives = 64/136 (47%)
Query: 442 ELSTEFDDEE-EHKVILLVHDTKPPFLDGRIVFTKQAEPVMPIKDPTSDMAIISRKGSAL 500
E FDD++ E K +++ K + + + + V +KD T D ++KGS
Sbjct: 317 EQRNNFDDQKSEKKKSDNINNDK--YYSNKPIQSTSYSTV--VKDETCDFVKAAKKGSEF 372
Query: 501 VREIREKQTQNKSRQRFWELAGSQMGNILGVKKTAEQVDADTAVVGEQGEIDFREDAKFS 560
++ + + ++K+R R+WE++ S++G +L + K ++ D + I + +
Sbjct: 373 LKYFKSENEKSKARDRYWEISNSKLGELLKLYKNKKKNKNDNTSKEDYDNISYNSSEN-N 431
Query: 561 QHMKKGEAVSDFAKSK 576
+ G V D+ K K
Sbjct: 432 KEDDNGSDVFDYKKDK 447
Score = 98 (39.6 bits), Expect = 3.6e-193, Sum P(3) = 3.6e-193
Identities = 32/113 (28%), Positives = 56/113 (49%)
Query: 362 DRAWYDREEGTTMFDTDSSSFILGDDASYQKKEVELAKRLVRKDGSRMSLAQSKKLSQIT 421
D WY +E+ + S + + +A+Y+K+ K+++ +R++ KK++Q
Sbjct: 203 DEIWYTKED-----EFVDSFYNMDIEATYEKE-----KKMINNLKTRINSNTGKKVNQKN 252
Query: 422 ADNHQWEERQLLRSGAVRGT--ELSTEFDDE----EEHKVILLVHDTKPPFLD 468
DN+ WE +L + G V T +L E +E E K I+L PPF+D
Sbjct: 253 LDNNLWELNKL-KQGGVTSTYNKLQLEKINEANVTNEIKKIVLTRTVNPPFID 304
>UNIPROTKB|C0H5K5 [details] [associations]
symbol:MAL13P1.322 "Splicing factor, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
EMBL:AL844509 HOGENOM:HOG000175261 KO:K12815 RefSeq:XP_002809102.1
ProteinModelPortal:C0H5K5 EnsemblProtists:MAL13P1.322:mRNA
GeneID:813888 KEGG:pfa:MAL13P1.322 EuPathDB:PlasmoDB:PF3D7_1364300
OMA:YFHNAAK ProtClustDB:CLSZ2500787 Uniprot:C0H5K5
Length = 1151
Score = 1077 (384.2 bits), Expect = 5.8e-195, Sum P(3) = 5.8e-195
Identities = 199/399 (49%), Positives = 276/399 (69%)
Query: 813 LKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTV 872
+K++++ ++ + I PIYSQL ++ Q+KIF+K RK IV+TNIAETSLT+
Sbjct: 754 IKKKVDGDNNTNDHMIYPFYIFPIYSQLSSEQQSKIFKKYD--LRKIIVSTNIAETSLTL 811
Query: 873 DGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAY 932
DGI YVIDTGY K+KVYN +GMD LQV P+S CYRLYTE+ +
Sbjct: 812 DGIKYVIDTGYCKLKVYNQTIGMDVLQVTPISQANANQRSGRAGRTGAGICYRLYTENTF 871
Query: 933 LNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALN 992
L ++ + +PEIQR+NL NVV FDF+D P +E+I+NS+++LWVLGA+N
Sbjct: 872 LCDLYQNNIPEIQRSNLSNVVLLLKSLHVQNLFEFDFIDVPSKESIINSLHELWVLGAIN 931
Query: 993 NVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEES 1052
N G LTD+G KMV+FPLDPPL+K+++ + C E+L IVSMLS PS+F K+ E
Sbjct: 932 NEGNLTDIGRKMVQFPLDPPLSKIVIYSQNFQCTKEILIIVSMLSSPSIFLESKENNESI 991
Query: 1053 DAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQLLDILKT 1112
++ +EKF V ESDHLTLL +Y QW+ H Y WC ++++ K+L KA+EV SQL+DI+KT
Sbjct: 992 ESKKEKFTVPESDHLTLLNIYLQWRSHNYSYSWCTKNFIQYKALNKAKEVYSQLIDIIKT 1051
Query: 1113 LKIPLTSSGHDFDVVRKAICSAYFHNAARLKGVGEYINCRNGMPCHLHPSSAIYGLGYTP 1172
L I S + ++++RK ICS YFHNAA+LK EYIN R + CH+HP+S++Y +GYTP
Sbjct: 1052 LNIKNVSCDNKWELIRKTICSGYFHNAAKLKSFSEYINLRTNVSCHVHPNSSLYNIGYTP 1111
Query: 1173 EYVVYHELILTTKEYMQCATAVEPQWLSELGPMFFSVKD 1211
+YV+Y E++ TTKEYM+ T V+P+WL ELGP+FF +K+
Sbjct: 1112 DYVIYQEIVFTTKEYMRNVTTVDPEWLCELGPLFFYMKN 1150
Score = 735 (263.8 bits), Expect = 5.8e-195, Sum P(3) = 5.8e-195
Identities = 143/251 (56%), Positives = 184/251 (73%)
Query: 578 LAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNGIVGCTQ 637
L + ++ LPI+ + ELL + N GETGSGKTTQ+ QYL E+GY NGI+ CTQ
Sbjct: 472 LLKLKESLPIYKSKHELLDAVYNNNIIIIVGETGSGKTTQIVQYLYEEGYHRNGIICCTQ 531
Query: 638 PRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDSDLD 697
PRRVAA+SVA RVS EM+ ++G VGY IRFED T T I+Y+TDG+LLRETL D +LD
Sbjct: 532 PRRVAAVSVAYRVSYEMNVDIGSLVGYTIRFEDNTTKDTKIRYVTDGILLRETLNDKELD 591
Query: 698 KYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPIFHI 757
KY VI+MDEAHERS++TDVL GILK + +R D KLIVTSAT++A+KFS FFG+ PI++I
Sbjct: 592 KYSVIIMDEAHERSINTDVLLGILKNICLKRNDLKLIVTSATIDAKKFSAFFGNAPIYNI 651
Query: 758 PGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPP-----GDILIFMTGQDEIEAACFA 812
GRTF V+ Y +TPC DY+E AV++A+ IH++ GDILIFMTGQ++I A C+
Sbjct: 652 QGRTFKVHIEYLRTPCNDYIECAVQKAIQIHVSDNNYDNNFGDILIFMTGQEDINATCYL 711
Query: 813 LKERMEQLISS 823
L ER ++ S
Sbjct: 712 LSERFYEVYES 722
Score = 115 (45.5 bits), Expect = 5.8e-195, Sum P(3) = 5.8e-195
Identities = 31/136 (22%), Positives = 64/136 (47%)
Query: 442 ELSTEFDDEE-EHKVILLVHDTKPPFLDGRIVFTKQAEPVMPIKDPTSDMAIISRKGSAL 500
E FDD++ E K +++ K + + + + V +KD T D ++KGS
Sbjct: 317 EQRNNFDDQKSEKKKSDNINNDK--YYSNKPIQSTSYSTV--VKDETCDFVKAAKKGSEF 372
Query: 501 VREIREKQTQNKSRQRFWELAGSQMGNILGVKKTAEQVDADTAVVGEQGEIDFREDAKFS 560
++ + + ++K+R R+WE++ S++G +L + K ++ D + I + +
Sbjct: 373 LKYFKSENEKSKARDRYWEISNSKLGELLKLYKNKKKNKNDNTSKEDYDNISYNSSEN-N 431
Query: 561 QHMKKGEAVSDFAKSK 576
+ G V D+ K K
Sbjct: 432 KEDDNGSDVFDYKKDK 447
Score = 98 (39.6 bits), Expect = 3.6e-193, Sum P(3) = 3.6e-193
Identities = 32/113 (28%), Positives = 56/113 (49%)
Query: 362 DRAWYDREEGTTMFDTDSSSFILGDDASYQKKEVELAKRLVRKDGSRMSLAQSKKLSQIT 421
D WY +E+ + S + + +A+Y+K+ K+++ +R++ KK++Q
Sbjct: 203 DEIWYTKED-----EFVDSFYNMDIEATYEKE-----KKMINNLKTRINSNTGKKVNQKN 252
Query: 422 ADNHQWEERQLLRSGAVRGT--ELSTEFDDE----EEHKVILLVHDTKPPFLD 468
DN+ WE +L + G V T +L E +E E K I+L PPF+D
Sbjct: 253 LDNNLWELNKL-KQGGVTSTYNKLQLEKINEANVTNEIKKIVLTRTVNPPFID 304
>UNIPROTKB|F1MEM4 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
OMA:NAWCYEN EMBL:DAAA02049231 EMBL:DAAA02049230 IPI:IPI00695401
Ensembl:ENSBTAT00000010976 Uniprot:F1MEM4
Length = 1230
Score = 1850 (656.3 bits), Expect = 6.9e-195, Sum P(2) = 6.9e-195
Identities = 388/827 (46%), Positives = 532/827 (64%)
Query: 413 QSKKLSQITADNHQWEERQLLRSGAVRGTE---------LSTEFDDEEEHKVILLVHDTK 463
+ K+L++I+ D +WE +Q++ + + E + + DDEE+ + + + + +
Sbjct: 397 ERKRLTRIS-DPEKWEIKQMIAANVLSKEEFPDFDEETGILPKVDDEEDEDLEIELVEEE 455
Query: 464 PPFLDGRIVFTKQAEPVMPIKDPTSDMAIISRKGSALVREIREKQTQNKSRQRFWELAGS 523
PPFL G + P+ +K+P ++ + SAL +E RE K QR E+
Sbjct: 456 PPFLRGHTKQSMDMSPIKIVKNPDGSLSQAAMMQSALAKERREL----KQAQREAEMDSI 511
Query: 524 QMG-NILGVKKT--AE--QVDADTAVVGEQGEIDFREDAKFSQHMKKGEAVSDFAKSK-T 577
MG N V AE Q+ A+ +G D E + +H G S K++ +
Sbjct: 512 PMGLNKHWVDPLPDAEGRQIAANMRGIGMMPN-DIPE---WKKHAFGGNKASYGKKTQMS 567
Query: 578 LAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNGIVGCTQ 637
+ EQR+ LPI+ ++++L+Q + +NQ GETGSGKTTQ+TQYL E GYT+ G +GCTQ
Sbjct: 568 IIEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIGCTQ 627
Query: 638 PRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDSDLD 697
PRRVAAMSVAKRVSEE LG +VGY IRFED T P T+IKYMTDG+LLRE L D DL
Sbjct: 628 PRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLT 687
Query: 698 KYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPIFHI 757
+Y +I++DEAHER++ TDVLFG+LKK V +R+D KLIVTSATL+A KFS +F PIF I
Sbjct: 688 QYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTI 747
Query: 758 PGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERM 817
PGRT+PV LY+K P DY++A++ M IH+T PPGDIL+F+TGQ+EI+ AC L ERM
Sbjct: 748 PGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERM 807
Query: 818 EQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFY 877
+ L +VPEL+ILP+YS LP+++Q +IF+ A G+RK ++ATNIAETSLT+DGI+Y
Sbjct: 808 KSL----GPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYY 863
Query: 878 VIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEML 937
V+D G+ K KVYN K G+D L V P+S CYRLYTE AY +EML
Sbjct: 864 VVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEML 923
Query: 938 PSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNVGAL 997
+ VPEIQRTNL + V FDFMD PP E ++ +M QL+ LGAL++ G L
Sbjct: 924 TTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLL 983
Query: 998 TDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAARE 1057
T LG +M EFPL+P L KML+M LGC +E+LTIVSMLSV +VF+RPKD+ +D +
Sbjct: 984 TRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKA 1043
Query: 1058 KFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQLLDILKTLKIPL 1117
KF E DHLTLL VY WK +++ WC E+++ +SLR+A+++R Q+L I+ K+ +
Sbjct: 1044 KFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDV 1103
Query: 1118 TSSGHDFDVVRKAICSAYFHNAARLKGVGEYINCRNGMPCHLHPSSAIYGLGYTPEYVVY 1177
S G V+KAICS +F NAA+ Y + ++HPSSA++ PE+VVY
Sbjct: 1104 VSCGKSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNR--QPEWVVY 1161
Query: 1178 HELILTTKEYMQCATAVEPQWLSELGPMFFSVKDSDTSMLEHKKKQK 1224
HEL+LTTKEYM+ T ++P+WL E P FF V D T + + KK+Q+
Sbjct: 1162 HELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDP-TKLSKQKKQQR 1207
Score = 60 (26.2 bits), Expect = 6.9e-195, Sum P(2) = 6.9e-195
Identities = 22/82 (26%), Positives = 33/82 (40%)
Query: 167 DRGSERKYLKDDTRSESRGPSRRDNYDSKGRYRGRE---ARDRDEPEYGGEYGRKRSKYD 223
D+ ++K + R R R + D K R+R R +R RD + Y R RS+
Sbjct: 181 DKAKKKKRSRSRERDRDRERERERDRDHKRRHRSRSRSRSRTRDRNKGKSRY-RSRSRSQ 239
Query: 224 GTRRT-PGRSDWDDGRWE-WED 243
R R + D + W D
Sbjct: 240 SPPRDRKDRDKYGDRNLDRWRD 261
Score = 55 (24.4 bits), Expect = 2.3e-194, Sum P(2) = 2.3e-194
Identities = 20/70 (28%), Positives = 28/70 (40%)
Query: 180 RSESRGPSRRDNYDSKGRYRGREARDRD-EPEYGGEYGRKRSKYDGTRRTPGRSDWDDGR 238
+ + R RD K R R RE RDRD E E + KR +R D + G+
Sbjct: 171 QEKHRDTEHRDKAKKKKRSRSRE-RDRDRERERERDRDHKRRHRSRSRSRSRTRDRNKGK 229
Query: 239 WEWEDTPRRE 248
+ R +
Sbjct: 230 SRYRSRSRSQ 239
>UNIPROTKB|Q14562 [details] [associations]
symbol:DHX8 "ATP-dependent RNA helicase DHX8" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=TAS] [GO:0005681 "spliceosomal complex" evidence=TAS]
[GO:0008380 "RNA splicing" evidence=TAS] [GO:0006396 "RNA
processing" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 EMBL:D50487 GO:GO:0005524 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316
HOVERGEN:HBG039428 KO:K12818 OMA:NAWCYEN IPI:IPI00031508 PIR:A56236
RefSeq:NP_004932.1 UniGene:Hs.463105 PDB:2EQS PDB:3I4U PDBsum:2EQS
PDBsum:3I4U ProteinModelPortal:Q14562 SMR:Q14562 IntAct:Q14562
STRING:Q14562 PhosphoSite:Q14562 DMDM:3023637 PaxDb:Q14562
PeptideAtlas:Q14562 PRIDE:Q14562 Ensembl:ENST00000262415
GeneID:1659 KEGG:hsa:1659 UCSC:uc002idu.1 CTD:1659
GeneCards:GC17P041572 HGNC:HGNC:2749 HPA:HPA049285 MIM:600396
neXtProt:NX_Q14562 PharmGKB:PA27231 InParanoid:Q14562
OrthoDB:EOG4D26P2 PhylomeDB:Q14562 EvolutionaryTrace:Q14562
GenomeRNAi:1659 NextBio:6828 ArrayExpress:Q14562 Bgee:Q14562
CleanEx:HS_DHX8 Genevestigator:Q14562 GermOnline:ENSG00000067596
Uniprot:Q14562
Length = 1220
Score = 1850 (656.3 bits), Expect = 3.8e-194, Sum P(2) = 3.8e-194
Identities = 388/827 (46%), Positives = 532/827 (64%)
Query: 413 QSKKLSQITADNHQWEERQLLRSGAVRGTE---------LSTEFDDEEEHKVILLVHDTK 463
+ K+L++I+ D +WE +Q++ + + E + + DDEE+ + + + + +
Sbjct: 387 ERKRLTRIS-DPEKWEIKQMIAANVLSKEEFPDFDEETGILPKVDDEEDEDLEIELVEEE 445
Query: 464 PPFLDGRIVFTKQAEPVMPIKDPTSDMAIISRKGSALVREIREKQTQNKSRQRFWELAGS 523
PPFL G + P+ +K+P ++ + SAL +E RE K QR E+
Sbjct: 446 PPFLRGHTKQSMDMSPIKIVKNPDGSLSQAAMMQSALAKERREL----KQAQREAEMDSI 501
Query: 524 QMG-NILGVKKT--AE--QVDADTAVVGEQGEIDFREDAKFSQHMKKGEAVSDFAKSK-T 577
MG N V AE Q+ A+ +G D E + +H G S K++ +
Sbjct: 502 PMGLNKHWVDPLPDAEGRQIAANMRGIGMMPN-DIPE---WKKHAFGGNKASYGKKTQMS 557
Query: 578 LAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNGIVGCTQ 637
+ EQR+ LPI+ ++++L+Q + +NQ GETGSGKTTQ+TQYL E GYT+ G +GCTQ
Sbjct: 558 ILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIGCTQ 617
Query: 638 PRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDSDLD 697
PRRVAAMSVAKRVSEE LG +VGY IRFED T P T+IKYMTDG+LLRE L D DL
Sbjct: 618 PRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLT 677
Query: 698 KYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPIFHI 757
+Y +I++DEAHER++ TDVLFG+LKK V +R+D KLIVTSATL+A KFS +F PIF I
Sbjct: 678 QYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTI 737
Query: 758 PGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERM 817
PGRT+PV LY+K P DY++A++ M IH+T PPGDIL+F+TGQ+EI+ AC L ERM
Sbjct: 738 PGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERM 797
Query: 818 EQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFY 877
+ L +VPEL+ILP+YS LP+++Q +IF+ A G+RK ++ATNIAETSLT+DGI+Y
Sbjct: 798 KSL----GPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYY 853
Query: 878 VIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEML 937
V+D G+ K KVYN K G+D L V P+S CYRLYTE AY +EML
Sbjct: 854 VVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEML 913
Query: 938 PSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNVGAL 997
+ VPEIQRTNL + V FDFMD PP E ++ +M QL+ LGAL++ G L
Sbjct: 914 TTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLL 973
Query: 998 TDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAARE 1057
T LG +M EFPL+P L KML+M LGC +E+LTIVSMLSV +VF+RPKD+ +D +
Sbjct: 974 TRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKA 1033
Query: 1058 KFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQLLDILKTLKIPL 1117
KF E DHLTLL VY WK +++ WC E+++ +SLR+A+++R Q+L I+ K+ +
Sbjct: 1034 KFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDV 1093
Query: 1118 TSSGHDFDVVRKAICSAYFHNAARLKGVGEYINCRNGMPCHLHPSSAIYGLGYTPEYVVY 1177
S G V+KAICS +F NAA+ Y + ++HPSSA++ PE+VVY
Sbjct: 1094 VSCGKSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNR--QPEWVVY 1151
Query: 1178 HELILTTKEYMQCATAVEPQWLSELGPMFFSVKDSDTSMLEHKKKQK 1224
HEL+LTTKEYM+ T ++P+WL E P FF V D T + + KK+Q+
Sbjct: 1152 HELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDP-TKLSKQKKQQR 1197
Score = 53 (23.7 bits), Expect = 3.8e-194, Sum P(2) = 3.8e-194
Identities = 18/61 (29%), Positives = 27/61 (44%)
Query: 164 DRDDRGSERKYLKDDTRSESRGPSRRDNYDSKGRYRGRE---ARDRDEPEYGGEYGRKRS 220
DR + +R +D R R R + D K R+R R +R R+ + Y R RS
Sbjct: 169 DRTKK-KKRSRSRDRNRDRDRDRERNRDRDHKRRHRSRSRSRSRTRERNKVKSRY-RSRS 226
Query: 221 K 221
+
Sbjct: 227 R 227
>UNIPROTKB|E2R9R9 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN CTD:1659 EMBL:AAEX03006434 EMBL:AAEX03006433
RefSeq:XP_537627.2 ProteinModelPortal:E2R9R9
Ensembl:ENSCAFT00000023129 GeneID:480507 KEGG:cfa:480507
Uniprot:E2R9R9
Length = 1216
Score = 1850 (656.3 bits), Expect = 4.8e-194, Sum P(2) = 4.8e-194
Identities = 388/827 (46%), Positives = 532/827 (64%)
Query: 413 QSKKLSQITADNHQWEERQLLRSGAVRGTE---------LSTEFDDEEEHKVILLVHDTK 463
+ K+L++I+ D +WE +Q++ + + E + + DDEE+ + + + + +
Sbjct: 383 ERKRLTRIS-DPEKWEIKQMIAANVLSKEEFPDFDEETGILPKVDDEEDEDLEIELVEEE 441
Query: 464 PPFLDGRIVFTKQAEPVMPIKDPTSDMAIISRKGSALVREIREKQTQNKSRQRFWELAGS 523
PPFL G + P+ +K+P ++ + SAL +E RE K QR E+
Sbjct: 442 PPFLRGHTKQSMDMSPIKIVKNPDGSLSQAAMMQSALAKERREL----KQAQREAEMDSI 497
Query: 524 QMG-NILGVKKT--AE--QVDADTAVVGEQGEIDFREDAKFSQHMKKGEAVSDFAKSK-T 577
MG N V AE Q+ A+ +G D E + +H G S K++ +
Sbjct: 498 PMGLNKHWVDPLPDAEGRQIAANMRGIGMMPN-DIPE---WKKHAFGGNKASYGKKTQMS 553
Query: 578 LAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNGIVGCTQ 637
+ EQR+ LPI+ ++++L+Q + +NQ GETGSGKTTQ+TQYL E GYT+ G +GCTQ
Sbjct: 554 IIEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIGCTQ 613
Query: 638 PRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDSDLD 697
PRRVAAMSVAKRVSEE LG +VGY IRFED T P T+IKYMTDG+LLRE L D DL
Sbjct: 614 PRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLT 673
Query: 698 KYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPIFHI 757
+Y +I++DEAHER++ TDVLFG+LKK V +R+D KLIVTSATL+A KFS +F PIF I
Sbjct: 674 QYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTI 733
Query: 758 PGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERM 817
PGRT+PV LY+K P DY++A++ M IH+T PPGDIL+F+TGQ+EI+ AC L ERM
Sbjct: 734 PGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERM 793
Query: 818 EQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFY 877
+ L +VPEL+ILP+YS LP+++Q +IF+ A G+RK ++ATNIAETSLT+DGI+Y
Sbjct: 794 KSL----GPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYY 849
Query: 878 VIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEML 937
V+D G+ K KVYN K G+D L V P+S CYRLYTE AY +EML
Sbjct: 850 VVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEML 909
Query: 938 PSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNVGAL 997
+ VPEIQRTNL + V FDFMD PP E ++ +M QL+ LGAL++ G L
Sbjct: 910 TTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLL 969
Query: 998 TDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAARE 1057
T LG +M EFPL+P L KML+M LGC +E+LTIVSMLSV +VF+RPKD+ +D +
Sbjct: 970 TRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKA 1029
Query: 1058 KFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQLLDILKTLKIPL 1117
KF E DHLTLL VY WK +++ WC E+++ +SLR+A+++R Q+L I+ K+ +
Sbjct: 1030 KFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDV 1089
Query: 1118 TSSGHDFDVVRKAICSAYFHNAARLKGVGEYINCRNGMPCHLHPSSAIYGLGYTPEYVVY 1177
S G V+KAICS +F NAA+ Y + ++HPSSA++ PE+VVY
Sbjct: 1090 VSCGKSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNR--QPEWVVY 1147
Query: 1178 HELILTTKEYMQCATAVEPQWLSELGPMFFSVKDSDTSMLEHKKKQK 1224
HEL+LTTKEYM+ T ++P+WL E P FF V D T + + KK+Q+
Sbjct: 1148 HELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDP-TKLSKQKKQQR 1193
Score = 52 (23.4 bits), Expect = 4.8e-194, Sum P(2) = 4.8e-194
Identities = 19/75 (25%), Positives = 30/75 (40%)
Query: 162 RHDRDDRGSERKYLKDDTRSESRGPSRRDNYDSKGRYRGRE-ARDRDEPEYGGEYGRKRS 220
+ D + R +K + +R R R + + K R+R R +R R G+ R RS
Sbjct: 162 QRDAEHRDKAKKKKRSRSRDRDRERERDRDREHKRRHRSRSRSRSRTRERNKGK-SRYRS 220
Query: 221 KYDGTRRTPGRSDWD 235
+ R D D
Sbjct: 221 RSRSQSPPKDRKDRD 235
Score = 51 (23.0 bits), Expect = 6.1e-194, Sum P(2) = 6.1e-194
Identities = 18/55 (32%), Positives = 27/55 (49%)
Query: 180 RSESRGPSRRDNYDSKGRYRGREARDRD-EPEYGGEYGRK-RSKYDGTRRTPGRS 232
+ + R RD K R R R+ RDR+ E + E+ R+ RS+ RT R+
Sbjct: 159 QEKQRDAEHRDKAKKKKRSRSRD-RDRERERDRDREHKRRHRSRSRSRSRTRERN 212
>FB|FBgn0086895 [details] [associations]
symbol:pea "peanuts" species:7227 "Drosophila melanogaster"
[GO:0007286 "spermatid development" evidence=IMP] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC;ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IC] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AE013599
GO:GO:0005524 GO:GO:0022008 GO:GO:0007286 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0000381 InterPro:IPR022967 SMART:SM00316
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN EMBL:BT044222
RefSeq:NP_610928.1 UniGene:Dm.12451 SMR:A1Z9L3 STRING:A1Z9L3
EnsemblMetazoa:FBtr0087518 GeneID:36561 KEGG:dme:Dmel_CG8241
UCSC:CG8241-RA CTD:36561 FlyBase:FBgn0086895 InParanoid:A1Z9L3
OrthoDB:EOG437PVS GenomeRNAi:36561 NextBio:799212 Uniprot:A1Z9L3
Length = 1242
Score = 1803 (639.7 bits), Expect = 6.1e-194, Sum P(2) = 6.1e-194
Identities = 377/821 (45%), Positives = 524/821 (63%)
Query: 415 KKLSQITADNHQWEERQLLRSGAVRGTELSTEFDDE---------EEHKVILLVHDTKPP 465
K++++I++ +WE +Q++ SG + +E+ +FD+E +E + + + + +PP
Sbjct: 411 KRVTRISSPE-RWEIKQMISSGVLDRSEMP-DFDEETGLLPKDEDDEADIEIEIVEEEPP 468
Query: 466 FLDGRIVFTKQAEPVMPIKDPTSDMAIISRKGSALVREIREKQTQNKSRQRFWELAGSQM 525
FL G PV +K+P +A + SAL +E RE++ + Q + S
Sbjct: 469 FLSGHGRALHDLSPVRIVKNPDGSLAQAAMMQSALSKERREQKMLQRE-QEIEAMPTSLN 527
Query: 526 GNILGVKKTAEQVDADTAVVGEQGEIDFREDAKFSQHMKKGEAVSDFAKSK--TLAEQRQ 583
N + E + G E ++ +H+ G+ S F K TL EQRQ
Sbjct: 528 KNWIDPLPEDESRSLAANMRGMAAAPP--EVPEWKKHVIGGKK-SSFGKKTDLTLVEQRQ 584
Query: 584 YLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNGIVGCTQPRRVAA 643
LPI+ +RD+L++ + +NQ GETGSGKTTQ+TQYL E G+T G +GCTQPRRVAA
Sbjct: 585 SLPIYKLRDDLIKAVTDNQILIVIGETGSGKTTQITQYLGECGFTARGKIGCTQPRRVAA 644
Query: 644 MSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDSDLDKYRVIV 703
MSVAKRV+EE LG +VGY IRFED T P T+IKYMTDG+LLRE L +++L Y VI+
Sbjct: 645 MSVAKRVAEEYGCRLGQEVGYTIRFEDCTSPETIIKYMTDGMLLRECLMEAELKSYSVIM 704
Query: 704 MDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPIFHIPGRTFP 763
+DEAHER++ TDVLFG+LK V +R + KLIVTSATL+A KFS +F PIF IPGRTFP
Sbjct: 705 LDEAHERTIHTDVLFGLLKTAVQKRPELKLIVTSATLDAVKFSQYFFKAPIFTIPGRTFP 764
Query: 764 VNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQLISS 823
V LY+K P DY++A++ M IH+ PPGDIL+F+TGQ+EI+ AC L ERM+ L
Sbjct: 765 VEVLYTKEPETDYLDASLITVMQIHLREPPGDILLFLTGQEEIDTACEILYERMKSL--- 821
Query: 824 TTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGY 883
+VPEL+ILP+YS LP+++Q +IF+ A G+RK ++ATNIAETSLT+DGIFYV+D G+
Sbjct: 822 -GPDVPELIILPVYSALPSEMQTRIFDPAPAGSRKVVIATNIAETSLTIDGIFYVVDPGF 880
Query: 884 GKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPE 943
K KVYN K GMD+L V P+S YRLYTE AY +EMLP+PVPE
Sbjct: 881 VKQKVYNSKTGMDSLVVTPISQAAAKQRAGRAGRTGPGKTYRLYTERAYRDEMLPTPVPE 940
Query: 944 IQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWK 1003
IQRTNL V FDFMD PP E+++ ++ QL L AL++ G LT LG +
Sbjct: 941 IQRTNLATTVLQLKTMGINDLLHFDFMDAPPVESLVMALEQLHSLSALDDEGLLTRLGRR 1000
Query: 1004 MVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAAREKFFVQE 1063
M EFPL+P L+KML+M L C DE+LTIVSMLSV +VF+RPKD+ +D + KF E
Sbjct: 1001 MAEFPLEPNLSKMLIMSVALQCSDEILTIVSMLSVQNVFYRPKDKQALADQKKAKFNQAE 1060
Query: 1064 SDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQLLDILKTLKIPLTSSGHD 1123
DHLTLL VY WK +++ WC E+++ +++L+++++VR QLL I+ K+ + S+G +
Sbjct: 1061 GDHLTLLAVYNSWKNNKFSNAWCYENFVQIRTLKRSQDVRKQLLGIMDRHKLDVVSAGKN 1120
Query: 1124 FDVVRKAICSAYFHNAARLKGVGEYINCRNGMPCHLHPSSAIYGLGYTPEYVVYHELILT 1183
++KAICS +F NAA+ Y + ++HPSSA++ PE+V+YHEL+ T
Sbjct: 1121 SVRIQKAICSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNR--QPEWVIYHELVQT 1178
Query: 1184 TKEYMQCATAVEPQWLSELGPMFFSVKDSDTSMLEHKKKQK 1224
TKEYM+ T ++P+WL E P FF D T + + KK Q+
Sbjct: 1179 TKEYMREVTTIDPKWLVEFAPSFFRFSDP-TKLSKFKKNQR 1218
Score = 98 (39.6 bits), Expect = 6.1e-194, Sum P(2) = 6.1e-194
Identities = 54/236 (22%), Positives = 87/236 (36%)
Query: 2 EKGAAAKLVDLD---KTTQLLEPEITNGGGLFVPNKERPIFRAPGAKAQSGLGVRAVEKG 58
+K A ++DL+ +T + + G F + + + R S G + EK
Sbjct: 28 DKDLAEFIIDLENKNRTYDTFRKALLDNGAEFPDSLVQNLQRIINLMRPSRPGGASQEKT 87
Query: 59 GGSQIDDGFK--VPRVASVAASIDEEEKSESSGIDEVVSNATNGKRSHASRRYRETSARD 116
G + +D + +A D K E S DE V K S +++T D
Sbjct: 88 VGDKKEDKKSQLLKMFPGLALPNDTYSKKEESDDDEKVK----AKPEKHSETHKKTDMSD 143
Query: 117 ITDAENPMAVGRAGETAGTHRSNEHAYVEXXXXXXXXXXXXXXXXRHDRDDRGSERKYLK 176
+ A + GE A R ++ R R+DR S+R+ +
Sbjct: 144 VDAAMMELEALAPGEGATLVRPHKEVSSRDRHKRRSRDRDTKRRSR-SREDRHSDRRRSR 202
Query: 177 DDTRSESRGPSRRDNYDSKGRYRGREARDRDEPEYGGEYGRKRSKYDGTRRTPGRS 232
+ R RDN + R R RE RDRD + + R ++ RR+ RS
Sbjct: 203 SRDKERRRRSRSRDN---RRRSRSREDRDRDR-DRRHKSSSSRDHHERRRRSRSRS 254
Score = 64 (27.6 bits), Expect = 2.4e-190, Sum P(2) = 2.4e-190
Identities = 26/90 (28%), Positives = 36/90 (40%)
Query: 168 RGSERKYLKD-DTRSESRGPSRRDNYDSKGRYRGREARDRDEPEYGGEYGRKRSKYDGTR 226
R ++ +D DT+ SR SR D + + R R R+ R R RS+ D R
Sbjct: 172 RDRHKRRSRDRDTKRRSR--SREDRHSDRRRSRSRDKERRRRSRSRDNRRRSRSREDRDR 229
Query: 227 RTPGRSDWDDGRWEWEDTPRREGYSNSSKR 256
R R E RR S S++R
Sbjct: 230 DRDRRHKSSSSRDHHER--RRRSRSRSTER 257
Score = 62 (26.9 bits), Expect = 3.9e-190, Sum P(2) = 3.9e-190
Identities = 32/158 (20%), Positives = 55/158 (34%)
Query: 64 DDGFKVPRVASVAASIDEEEKSESSGIDEVVSNA---TNGKRSHASRRYRETSARDITDA 120
DD KV A + +K++ S +D + G+ + R ++E S+RD
Sbjct: 120 DDDEKVK--AKPEKHSETHKKTDMSDVDAAMMELEALAPGEGATLVRPHKEVSSRDRHKR 177
Query: 121 ENPMAVGRAGETAGTHRSNEHAYVEXXXXXXXXXXXXXXXXRHDRDDRGSERKYLKDDTR 180
+ R +T RS E + + D R R+ D
Sbjct: 178 RS-----RDRDTKRRSRSREDRHSDRRRSRSRDKERRRRSRSRDNRRRSRSREDRDRDRD 232
Query: 181 SESRGPSRRDNYDSKGRYRGREARDRDEPEYGGEYGRK 218
+ S RD+++ + R R R RD + + K
Sbjct: 233 RRHKSSSSRDHHERRRRSRSRSTERRDRRDRSRDCSEK 270
Score = 53 (23.7 bits), Expect = 3.5e-189, Sum P(2) = 3.5e-189
Identities = 22/62 (35%), Positives = 27/62 (43%)
Query: 164 DRDDR---GSERKYLKDDTRSESRGPSRRDNYD-SKG---RYRGREARDRDEPEYGGEYG 216
DRD R S R + + RS SR RRD D S+ + A D+PE G Y
Sbjct: 230 DRDRRHKSSSSRDHHERRRRSRSRSTERRDRRDRSRDCSEKMPPPSAAMTDDPEAGKIYS 289
Query: 217 RK 218
K
Sbjct: 290 GK 291
>UNIPROTKB|G4NFJ0 [details] [associations]
symbol:MGG_08807 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp22" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:CM001236 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 KO:K12818 RefSeq:XP_003719164.1
ProteinModelPortal:G4NFJ0 EnsemblFungi:MGG_08807T0 GeneID:2678973
KEGG:mgr:MGG_08807 Uniprot:G4NFJ0
Length = 1207
Score = 1811 (642.6 bits), Expect = 3.4e-193, Sum P(2) = 3.4e-193
Identities = 377/858 (43%), Positives = 539/858 (62%)
Query: 410 SLAQSKKLSQITADNHQWEERQLLRSGAVRGT---ELSTEFDD--------EEEHKVILL 458
+L K ++T+ +WE RQ++ SG + + EL ++++ E E V +
Sbjct: 354 TLPGRKHKKRMTSPE-RWEIRQMIASGVAKASDYPELEEDYNNALSGEGQMELEEDVDIE 412
Query: 459 VHDTKPPFLDGRIVFTKQAEPVMPIKDPTSDMAIISRKGSALVREIREKQTQNKSRQRFW 518
+ D +PPFL G+ + + P+ +K P + + G++LV+E +E + Q
Sbjct: 413 IRDEEPPFLAGQTKQSLELSPIRVVKAPDGSLNRAAMAGTSLVKERKEIRQQEAE----- 467
Query: 519 ELAGSQMGNILGVKKTAEQVDADTAVVGEQGEIDFREDAKFSQHMKKGEAVSD------- 571
A +Q G A Q + A + + F D + + + EAV +
Sbjct: 468 --AAAQAAATNGKVDLASQWEDPMA---DPDKRKFAADMRRTMQNRPSEAVPEWRQAIAP 522
Query: 572 ----FAK--SKTLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLED 625
F K + T+ +QR+ LP+F+ R++L++ ++ENQ GETGSGKTTQLTQYL E
Sbjct: 523 KNQSFGKRTNMTIKQQRESLPVFAFREQLIKAVKENQIMIVVGETGSGKTTQLTQYLAEA 582
Query: 626 GYTTNGIVGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGV 685
G+ G++GCTQPRRVAAMSVAKRVSEE+ ELG +VGY IRFED T P+T IKYMTDG+
Sbjct: 583 GFANEGVIGCTQPRRVAAMSVAKRVSEEVGCELGQEVGYTIRFEDCTSPATRIKYMTDGM 642
Query: 686 LLRETLKDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKF 745
L RE + D DL +Y VI++DEAHER+++TDVLF +LKK RR D K+IVTSATL+A KF
Sbjct: 643 LQREIVIDPDLKRYSVIMLDEAHERTIATDVLFALLKKATRRRPDLKIIVTSATLDADKF 702
Query: 746 SDFFGSVPIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDE 805
S +F PIF IPGRTFPV LYSK P DY++AA+ M IHI PPGDIL+F+TGQ+E
Sbjct: 703 SAYFNECPIFTIPGRTFPVEILYSKDPESDYLDAALTTVMQIHIDEPPGDILLFLTGQEE 762
Query: 806 IEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNI 865
I+ +C L ERM+ L S VPEL+ILP+YS LP ++Q++IF+ A G+RK ++ATNI
Sbjct: 763 IDTSCEILFERMKALGPS----VPELIILPVYSALPNEMQSRIFDPAPPGSRKVVIATNI 818
Query: 866 AETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYR 925
AETS+T+D I+YV+D G+ K Y+PK+GMD+L V P+S C+R
Sbjct: 819 AETSITIDHIYYVVDPGFVKQNAYDPKLGMDSLVVTPISQAQANQRAGRAGRTGPGKCFR 878
Query: 926 LYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQL 985
LYTE+AY EMLP+ +PEIQR NL N + FDFMDPPP +L ++ +L
Sbjct: 879 LYTEAAYQTEMLPTSIPEIQRQNLSNTILLLKAMGINDLLHFDFMDPPPINTMLTALEEL 938
Query: 986 WVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRP 1045
+ L AL++ G LT LG KM +FP++P L+K+L+ ++ C DE+L+IV+ML++P+VF+RP
Sbjct: 939 YALSALDDEGLLTRLGRKMADFPMEPSLSKVLIASVEMRCSDEMLSIVAMLNLPNVFYRP 998
Query: 1046 KDRAEESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQ 1105
K++ ++DA + KF DHLTLL VY WK+ +Y WC E+++ ++L +AR+VR+Q
Sbjct: 999 KEKQTQADAKKAKFHDPNGDHLTLLNVYNAWKQSRYSKPWCAENFIQFRALTRARDVRNQ 1058
Query: 1106 LLDILKTLKIPLTSSGHDFDVVRKAICSAYFHNAARLKGVGEYINCRNGMPCHLHPSSAI 1165
+ I++ K + S G D + VR+A+CS +F NAAR Y G P +LHPSSA+
Sbjct: 1059 IERIMQRFKYQVMSCGSDTNRVRQALCSGFFRNAARKDQQEGYRTLIEGTPVYLHPSSAL 1118
Query: 1166 YGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFFSVKDSDTSMLEHKKKQKE 1225
+G E+V+YH L+LTTKEYM C T++EP+WL + P FF V SD L +++Q+
Sbjct: 1119 FGKH--AEWVIYHTLVLTTKEYMHCTTSIEPKWLVDAAPTFFKVSASDK--LSKRRQQER 1174
Query: 1226 SKTAMEE-EMENLRKIQA 1242
+ + E EN ++ A
Sbjct: 1175 IQPLYNKFEGENDWRLSA 1192
Score = 83 (34.3 bits), Expect = 3.4e-193, Sum P(2) = 3.4e-193
Identities = 27/80 (33%), Positives = 37/80 (46%)
Query: 163 HD---RDDRGSERKYLKDDTRSESRGPSRRDNYDSKGRYRGRE-ARDRDEPEYGGEYGR- 217
HD ++DR ER + +RS G + K +YR R +R R + +YG R
Sbjct: 151 HDDYRKEDRNGERTSYRKRSRSPEAGYGD-SRHRRKEQYRSRSRSRSRGKDQYGRRSRRD 209
Query: 218 KRSKY-DGTRRTPGRSDWDD 236
K Y DG + P R D DD
Sbjct: 210 KYDDYNDGYDQKPARQDLDD 229
Score = 72 (30.4 bits), Expect = 4.9e-192, Sum P(2) = 4.9e-192
Identities = 24/99 (24%), Positives = 41/99 (41%)
Query: 176 KDDTRSESRGPSRRDNY---DSKGRYRGREARDRD-EPEYGGEYGRKRSKYDGTRRTPGR 231
K + + SRG + D+Y D G R R E YG R++ +Y R+ R
Sbjct: 138 KPEKKDTSRGANGHDDYRKEDRNGERTSYRKRSRSPEAGYGDSRHRRKEQYRSRSRSRSR 197
Query: 232 SDWDDGRWEWEDTPRREGYSNSSKRYQPSPSPMFVGASP 270
G+ ++ RR+ Y + + Y P+ + +P
Sbjct: 198 -----GKDQYGRRSRRDKYDDYNDGYDQKPARQDLDDTP 231
Score = 40 (19.1 bits), Expect = 1.2e-188, Sum P(2) = 1.2e-188
Identities = 14/62 (22%), Positives = 27/62 (43%)
Query: 54 AVEKGGGSQIDDGFKVPRVASVAASIDEEEKSE-SSGIDEVVSNATNGKRSHASRRYRET 112
A+ G IDD + + ++++ S ++G D+ NG+R+ +R R
Sbjct: 114 ALADEGPDAIDDTLALLEGLAPKGKPEKKDTSRGANGHDDYRKEDRNGERTSYRKRSRSP 173
Query: 113 SA 114
A
Sbjct: 174 EA 175
>DICTYBASE|DDB_G0291183 [details] [associations]
symbol:dhx8 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA;ISS]
[GO:0006396 "RNA processing" evidence=ISS] [GO:0005681
"spliceosomal complex" evidence=IEA;ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
dictyBase:DDB_G0291183 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0005681 GenomeReviews:CM000154_GR GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 EMBL:AAFI02000175
InterPro:IPR022967 SMART:SM00316 KO:K12818 OMA:NAWCYEN
RefSeq:XP_635385.1 HSSP:P05055 ProteinModelPortal:Q54F05
EnsemblProtists:DDB0233399 GeneID:8628033 KEGG:ddi:DDB_G0291183
ProtClustDB:CLSZ2846610 Uniprot:Q54F05
Length = 1160
Score = 1845 (654.5 bits), Expect = 1.5e-192, Sum P(2) = 1.5e-192
Identities = 380/830 (45%), Positives = 541/830 (65%)
Query: 414 SKKLSQITADNHQWEERQLLRSGAVRGTELSTEFD--------DEE--EHKVILLVHDTK 463
SK +I + + +W +QL+ SG + E+ +D DEE E + ++ +
Sbjct: 330 SKNRKRIASPD-RWGYKQLIASGILSVPEMPN-YDKEVGLVNHDEEQPEEDFDIERNEDE 387
Query: 464 PPFLDGRIVFTKQAEPVMPIKDPTSDMAIISRKGSALVREIREKQTQNKSRQ-----RFW 518
P FL G + +Q P+ +K P + + +AL +E +E++ Q ++ +
Sbjct: 388 PQFLKGTRMNMQQLSPIKIVKKPNGSLQRAASTQTALSKERKEEKNQQRNEMMDSIPKDL 447
Query: 519 ELAGSQMGNILGVKKTAEQVDADTAVVGEQGEIDFREDAKFSQ--HMKKGEAVSDFAKSK 576
L G + A+++ ++ G+ + + E K +Q H++ G+A S +
Sbjct: 448 SLPWHDPMPEAGERHLAQEI---RSIAGQGIDTEIPEWKKVTQGSHIQYGKATS-----R 499
Query: 577 TLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNGIVGCT 636
++ EQR+ LPIF +R+ LQ + E+Q GETGSGKTTQ+ QYL E GY T G +GCT
Sbjct: 500 SIKEQRESLPIFPLREAFLQAVSEHQLLVVIGETGSGKTTQMAQYLAEAGYGTRGKIGCT 559
Query: 637 QPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDSDL 696
QPRRVAAMSV+KRV+EE +LG +VGYAIRFED T P T+IK+MTDG+LLRE L D +L
Sbjct: 560 QPRRVAAMSVSKRVAEEFGCQLGQEVGYAIRFEDCTSPETIIKFMTDGILLRECLLDPNL 619
Query: 697 DKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPIFH 756
Y VI++DEAHER++STDVLFG+LK+ + RR + K+++TSATL A+KFS +F + +F
Sbjct: 620 SAYSVIILDEAHERTISTDVLFGLLKQALQRRPELKVLITSATLEAEKFSKYFMNAQLFI 679
Query: 757 IPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKER 816
IPGRTFPV+ Y+K P DY++A++ M IH++ PPGDIL+F+TGQ+EI+AAC L ER
Sbjct: 680 IPGRTFPVDIRYTKDPEADYLDASLITVMQIHLSEPPGDILLFLTGQEEIDAACQILYER 739
Query: 817 MEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIF 876
M+ L S+ VP+L+ILP+YS LP+++Q KIFE A G+RK ++ATNIAETSLT+DGI+
Sbjct: 740 MKSLGSN----VPDLIILPVYSALPSEMQTKIFEPAPPGSRKVVIATNIAETSLTIDGIY 795
Query: 877 YVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEM 936
YVID G+ K K +NPK GMD+L V P+S CYRLYTESA+ NEM
Sbjct: 796 YVIDPGFSKQKCFNPKNGMDSLVVAPISQAAARQRSGRAGRTGPGKCYRLYTESAFKNEM 855
Query: 937 LPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNVGA 996
L S +PEIQRTNLGN V FDFMDPPP + ++++M QL+ LGAL+ G
Sbjct: 856 LASSIPEIQRTNLGNTVLTMKAMGINDLLNFDFMDPPPVQTLVSAMEQLYSLGALDEEGL 915
Query: 997 LTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAAR 1056
LT LG KM EFPLDP L+KML+ LGC DE+LT+V+MLSV +VF+RPK++ +D +
Sbjct: 916 LTRLGRKMAEFPLDPQLSKMLIASVDLGCSDEILTVVAMLSVQNVFYRPKEKQALADQKK 975
Query: 1057 EKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQLLDILKTLKIP 1116
KFF E DHLTLL VY+ WK ++ WC E+++ +SLR+A++VR QL+ I+ K+
Sbjct: 976 AKFFQPEGDHLTLLNVYESWKNSKFSNPWCFENFVQARSLRRAQDVRKQLITIMDRYKLD 1035
Query: 1117 LTSSGHDFDVVRKAICSAYFHNAARLKGVGE-YINCRNGMPCHLHPSSAIYGLGYTPEYV 1175
+ S+G ++ ++KAICS +F NA++ K E Y G P ++HPSS ++ P++V
Sbjct: 1036 IISAGRNYTKIQKAICSGFFANASK-KDPNEGYKTLVEGQPVYIHPSSTLFNRN--PDWV 1092
Query: 1176 VYHELILTTKEYMQCATAVEPQWLSELGPMFFSVKDSDTSMLEHKKKQKE 1225
+YHEL++TTKEYM+ ++P+WL EL P FF K SD + + K+K+KE
Sbjct: 1093 IYHELVMTTKEYMREVCTIDPKWLVELAPKFF--KTSDPNKIS-KRKRKE 1139
Score = 43 (20.2 bits), Expect = 1.5e-192, Sum P(2) = 1.5e-192
Identities = 9/34 (26%), Positives = 17/34 (50%)
Query: 177 DDTRSESRGPSRRDNYDSKGRYRGREARDRDEPE 210
DD +++ ++ + D + RE RDRD +
Sbjct: 155 DDEKTKEELKRKQQDMDREFEREQREKRDRDREQ 188
Score = 40 (19.1 bits), Expect = 3.0e-192, Sum P(2) = 3.0e-192
Identities = 6/22 (27%), Positives = 14/22 (63%)
Query: 217 RKRSKYDGTRRTPGRSDWDDGR 238
+K++++ G P + +WD G+
Sbjct: 128 QKKNQFPGLS-IPNKVEWDQGK 148
Score = 40 (19.1 bits), Expect = 3.0e-192, Sum P(2) = 3.0e-192
Identities = 10/38 (26%), Positives = 16/38 (42%)
Query: 225 TRRTPGRSDWDDGRWEWEDTPRREGYSNSSKRYQPSPS 262
T T +++ + EWE+T +N K P S
Sbjct: 102 TTTTTNNNNYKES--EWEETKLNSNSNNQKKNQFPGLS 137
>WB|WBGene00003393 [details] [associations]
symbol:mog-5 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0002009 "morphogenesis
of an epithelium" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0040020
"regulation of meiosis" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] [GO:0048589 "developmental growth" evidence=IMP]
[GO:0010172 "embryonic body morphogenesis" evidence=IMP]
[GO:0040022 "feminization of hermaphroditic germ-line"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006915
GO:GO:0002119 GO:GO:0008380 GO:GO:0018996 GO:GO:0006397
GO:GO:0040011 GO:GO:0003723 GO:GO:0042127 GO:GO:0007281
GO:GO:0048589 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0040022 GO:GO:0008026 EMBL:FO081042 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN EMBL:AF286899 PIR:T15921 RefSeq:NP_495019.1
UniGene:Cel.7556 ProteinModelPortal:Q09530 SMR:Q09530
DIP:DIP-25759N IntAct:Q09530 MINT:MINT-1046882 STRING:Q09530
PaxDb:Q09530 EnsemblMetazoa:EEED8.5 GeneID:173920
KEGG:cel:CELE_EEED8.5 UCSC:EEED8.5 CTD:173920 WormBase:EEED8.5
InParanoid:Q09530 NextBio:881669 Uniprot:Q09530
Length = 1200
Score = 1791 (635.5 bits), Expect = 5.0e-190, Sum P(2) = 5.0e-190
Identities = 372/832 (44%), Positives = 521/832 (62%)
Query: 406 GSRMSLAQSKKLSQITADNHQWEERQLLRSGAVRGTELST---------EFDDEEEHK-- 454
G S+ K +I+ +WE RQ+ +G + T++ +DDE + +
Sbjct: 351 GPSTSIGGGKARVRISTPE-RWELRQMQGAGVLTATDMPDFDEEMGVLRNYDDESDGEDI 409
Query: 455 VILLVHDTKPPFLDGRIVFTKQAEPVMPIKDPTSDMAIISRKGSALVREIREKQTQ-NKS 513
I LV D +P FL G + EPV +K+P +A + AL +E +E + Q +
Sbjct: 410 EIELVED-EPDFLRGYGKGGAEIEPVKVVKNPDGSLAQAALMQGALSKERKETKIQAQRE 468
Query: 514 RQRFWELAGSQMGNILGVKKTAEQVDADTAVVGEQGEIDFREDAKFSQHMKKG-EAVSDF 572
R + S IL + Q A +A + +E ++ +H+ G +A
Sbjct: 469 RDMDTQKGFSSNARILD-PMSGNQSTAWSADESKDRNNKMKEMPEWLKHVTAGGKATYGR 527
Query: 573 AKSKTLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNGI 632
+ ++ EQR+ LPIF+++ L++ + +NQ GETGSGKTTQ+TQY +E G G
Sbjct: 528 RTNLSMVEQRESLPIFALKKNLMEAMIDNQILVVVGETGSGKTTQMTQYAIEAGLGRRGK 587
Query: 633 VGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLK 692
+GCTQPRRVAAMSVAKRV+EE +LG VGY IRFED T T+IKYMTDG+LLRE L
Sbjct: 588 IGCTQPRRVAAMSVAKRVAEEYGCKLGTDVGYTIRFEDCTSQDTIIKYMTDGMLLRECLI 647
Query: 693 DSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSV 752
D DL Y +I++DEAHER++ TDVLFG+LK +R + KLI+TSATL++ KFS++F
Sbjct: 648 DPDLSGYSLIMLDEAHERTIHTDVLFGLLKAAARKRPELKLIITSATLDSVKFSEYFLEA 707
Query: 753 PIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFA 812
PIF IPGRTFPV LY++ P DY+EAA M IH+T PPGD+L+F+TGQ+EI+ +C
Sbjct: 708 PIFTIPGRTFPVEILYTREPESDYLEAAHITVMQIHLTEPPGDVLVFLTGQEEIDTSCEV 767
Query: 813 LKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTV 872
L ERM+ S +VPEL+ILP+Y LP+++Q +IF+ A G RK ++ATNIAETSLT+
Sbjct: 768 LYERMK----SMGPDVPELIILPVYGALPSEMQTRIFDPAPAGKRKVVIATNIAETSLTI 823
Query: 873 DGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAY 932
DGIFYV+D G+ K K+YNPK GMD+L V P+S CYRLYTE A+
Sbjct: 824 DGIFYVVDPGFVKQKIYNPKSGMDSLVVTPISQAAAKQRSGRAGRTGPGKCYRLYTERAF 883
Query: 933 LNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALN 992
+EMLP+PVPEIQRTNL + + FDFMD PP ++++ ++ L L AL+
Sbjct: 884 RDEMLPTPVPEIQRTNLASTLLQLKAMGINNLIDFDFMDAPPLDSMITALNTLHTLSALD 943
Query: 993 NVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEES 1052
G LT LG +M EFPL+P L+K+L+M LGC +EVLTIV+ML+V ++F+RPK++ + +
Sbjct: 944 GDGLLTKLGRRMAEFPLEPSLSKLLIMSVDLGCSEEVLTIVAMLNVQNIFYRPKEKQDHA 1003
Query: 1053 DAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQLLDILKT 1112
D + KF E DHLTLL VY WK H + WC E+++ V+S+++A+++R QLL I+
Sbjct: 1004 DQKKAKFHQPEGDHLTLLAVYNSWKNHHFSQPWCFENFIQVRSMKRAQDIRKQLLGIMDR 1063
Query: 1113 LKIPLTSSGHDFDVVRKAICSAYFHNAARLKGVGEYINCRNGMPCHLHPSSAIYGLGYTP 1172
K+ + S G D V+KAICS +F NAA+ Y +G ++HPSSA + P
Sbjct: 1064 HKLLMVSCGRDVSRVQKAICSGFFRNAAKRDPQEGYRTLTDGQNVYIHPSSACFQ--QQP 1121
Query: 1173 EYVVYHELILTTKEYMQCATAVEPQWLSELGPMFFSVKDSDTSMLEHKKKQK 1224
E+VVYHEL++TTKEYM+ TA++P+WL E P FF + DS T + K+ QK
Sbjct: 1122 EWVVYHELVMTTKEYMREVTAIDPKWLVEFAPSFFKIGDS-TKLSTFKRNQK 1172
Score = 73 (30.8 bits), Expect = 5.0e-190, Sum P(2) = 5.0e-190
Identities = 46/188 (24%), Positives = 67/188 (35%)
Query: 53 RAVEKGG-GSQIDDGFKVPRVASVAASIDEEEKSESSGIDEVVSNATNGKRSHASRRYRE 111
+A++ G G Q DD + + S+ +K G D + + K SH +
Sbjct: 47 KALDSQGLGDQFDDSLTAT-ILRIVQSMTAVKKKNKKGGD----SKEDIKDSHKITLISD 101
Query: 112 TSARDITDAENPMAVGRAGETAGTHRSNEHAYVEXXXXXXXXXXXXXXXXRHDRDDRGSE 171
A++ A P A+ A TA NE + + R
Sbjct: 102 --AKEEIKARLP-ALAMAN-TAKEKEDNEDDLMAQLEKMEGRYESEKRLQKESDSKRNRS 157
Query: 172 RKYLKDDTRSESRGPSRRDNYDSKGRYRGRE-ARDRDEPEYGGEYGRKRSKYDGTRRTPG 230
R + +R R SR + D + R R RE RDRD + + R R G R
Sbjct: 158 RS--RSRSRDRKRRRSRSGDRDRRRRSRSREDRRDRDRRDRDRDRDRGRGDRRGDDRQRD 215
Query: 231 RSDW-DDG 237
R D DDG
Sbjct: 216 RRDRRDDG 223
Score = 68 (29.0 bits), Expect = 1.7e-189, Sum P(2) = 1.7e-189
Identities = 29/90 (32%), Positives = 40/90 (44%)
Query: 170 SERKYLKDDTRSESRGPSRRDNYDSKGRYRGREA-RDRDEPEYGGEYGRKRSKYDGTR-R 227
SE++ K+ +R SR + D K R R R RDR E R R + D R R
Sbjct: 142 SEKRLQKESDSKRNRSRSRSRSRDRKRR-RSRSGDRDRRRRSRSREDRRDRDRRDRDRDR 200
Query: 228 TPGRSD--WDDGRWEWEDTPRREGYSNSSK 255
GR D DD + + D R +G + S+
Sbjct: 201 DRGRGDRRGDDRQRDRRDR-RDDGGARKSE 229
Score = 61 (26.5 bits), Expect = 9.3e-189, Sum P(2) = 9.3e-189
Identities = 23/62 (37%), Positives = 27/62 (43%)
Query: 162 RHDRD--DRGSERKYLKDDTRSESRGPSRRDNYDSKGRYRGREARDRDEPEYGGEY-GRK 218
R DRD DR +R + D R + R RRD D G AR + E G Y GR
Sbjct: 188 RRDRDRRDRDRDRDRGRGDRRGDDRQRDRRDRRDDGG------ARKSEVAEIGKIYDGRV 241
Query: 219 RS 220
S
Sbjct: 242 NS 243
Score = 45 (20.9 bits), Expect = 4.6e-187, Sum P(2) = 4.6e-187
Identities = 18/60 (30%), Positives = 29/60 (48%)
Query: 71 RVASVAASIDEEEKSESSGIDEVVSNATNGKRSHASRRYRETSARDITDAE---NPMAVG 127
RV +VA D ++ E+ + V+ NGK S + + + S D+ E NP A+G
Sbjct: 273 RVQTVA---DVLKRGENVKVK--VNKIENGKISLSMKEVDQNSGEDLNPRETDLNPDAIG 327
>UNIPROTKB|Q09530 [details] [associations]
symbol:mog-5 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-5" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006915
GO:GO:0002119 GO:GO:0008380 GO:GO:0018996 GO:GO:0006397
GO:GO:0040011 GO:GO:0003723 GO:GO:0042127 GO:GO:0007281
GO:GO:0048589 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0040022 GO:GO:0008026 EMBL:FO081042 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN EMBL:AF286899 PIR:T15921 RefSeq:NP_495019.1
UniGene:Cel.7556 ProteinModelPortal:Q09530 SMR:Q09530
DIP:DIP-25759N IntAct:Q09530 MINT:MINT-1046882 STRING:Q09530
PaxDb:Q09530 EnsemblMetazoa:EEED8.5 GeneID:173920
KEGG:cel:CELE_EEED8.5 UCSC:EEED8.5 CTD:173920 WormBase:EEED8.5
InParanoid:Q09530 NextBio:881669 Uniprot:Q09530
Length = 1200
Score = 1791 (635.5 bits), Expect = 5.0e-190, Sum P(2) = 5.0e-190
Identities = 372/832 (44%), Positives = 521/832 (62%)
Query: 406 GSRMSLAQSKKLSQITADNHQWEERQLLRSGAVRGTELST---------EFDDEEEHK-- 454
G S+ K +I+ +WE RQ+ +G + T++ +DDE + +
Sbjct: 351 GPSTSIGGGKARVRISTPE-RWELRQMQGAGVLTATDMPDFDEEMGVLRNYDDESDGEDI 409
Query: 455 VILLVHDTKPPFLDGRIVFTKQAEPVMPIKDPTSDMAIISRKGSALVREIREKQTQ-NKS 513
I LV D +P FL G + EPV +K+P +A + AL +E +E + Q +
Sbjct: 410 EIELVED-EPDFLRGYGKGGAEIEPVKVVKNPDGSLAQAALMQGALSKERKETKIQAQRE 468
Query: 514 RQRFWELAGSQMGNILGVKKTAEQVDADTAVVGEQGEIDFREDAKFSQHMKKG-EAVSDF 572
R + S IL + Q A +A + +E ++ +H+ G +A
Sbjct: 469 RDMDTQKGFSSNARILD-PMSGNQSTAWSADESKDRNNKMKEMPEWLKHVTAGGKATYGR 527
Query: 573 AKSKTLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNGI 632
+ ++ EQR+ LPIF+++ L++ + +NQ GETGSGKTTQ+TQY +E G G
Sbjct: 528 RTNLSMVEQRESLPIFALKKNLMEAMIDNQILVVVGETGSGKTTQMTQYAIEAGLGRRGK 587
Query: 633 VGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLK 692
+GCTQPRRVAAMSVAKRV+EE +LG VGY IRFED T T+IKYMTDG+LLRE L
Sbjct: 588 IGCTQPRRVAAMSVAKRVAEEYGCKLGTDVGYTIRFEDCTSQDTIIKYMTDGMLLRECLI 647
Query: 693 DSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSV 752
D DL Y +I++DEAHER++ TDVLFG+LK +R + KLI+TSATL++ KFS++F
Sbjct: 648 DPDLSGYSLIMLDEAHERTIHTDVLFGLLKAAARKRPELKLIITSATLDSVKFSEYFLEA 707
Query: 753 PIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFA 812
PIF IPGRTFPV LY++ P DY+EAA M IH+T PPGD+L+F+TGQ+EI+ +C
Sbjct: 708 PIFTIPGRTFPVEILYTREPESDYLEAAHITVMQIHLTEPPGDVLVFLTGQEEIDTSCEV 767
Query: 813 LKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTV 872
L ERM+ S +VPEL+ILP+Y LP+++Q +IF+ A G RK ++ATNIAETSLT+
Sbjct: 768 LYERMK----SMGPDVPELIILPVYGALPSEMQTRIFDPAPAGKRKVVIATNIAETSLTI 823
Query: 873 DGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAY 932
DGIFYV+D G+ K K+YNPK GMD+L V P+S CYRLYTE A+
Sbjct: 824 DGIFYVVDPGFVKQKIYNPKSGMDSLVVTPISQAAAKQRSGRAGRTGPGKCYRLYTERAF 883
Query: 933 LNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALN 992
+EMLP+PVPEIQRTNL + + FDFMD PP ++++ ++ L L AL+
Sbjct: 884 RDEMLPTPVPEIQRTNLASTLLQLKAMGINNLIDFDFMDAPPLDSMITALNTLHTLSALD 943
Query: 993 NVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEES 1052
G LT LG +M EFPL+P L+K+L+M LGC +EVLTIV+ML+V ++F+RPK++ + +
Sbjct: 944 GDGLLTKLGRRMAEFPLEPSLSKLLIMSVDLGCSEEVLTIVAMLNVQNIFYRPKEKQDHA 1003
Query: 1053 DAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQLLDILKT 1112
D + KF E DHLTLL VY WK H + WC E+++ V+S+++A+++R QLL I+
Sbjct: 1004 DQKKAKFHQPEGDHLTLLAVYNSWKNHHFSQPWCFENFIQVRSMKRAQDIRKQLLGIMDR 1063
Query: 1113 LKIPLTSSGHDFDVVRKAICSAYFHNAARLKGVGEYINCRNGMPCHLHPSSAIYGLGYTP 1172
K+ + S G D V+KAICS +F NAA+ Y +G ++HPSSA + P
Sbjct: 1064 HKLLMVSCGRDVSRVQKAICSGFFRNAAKRDPQEGYRTLTDGQNVYIHPSSACFQ--QQP 1121
Query: 1173 EYVVYHELILTTKEYMQCATAVEPQWLSELGPMFFSVKDSDTSMLEHKKKQK 1224
E+VVYHEL++TTKEYM+ TA++P+WL E P FF + DS T + K+ QK
Sbjct: 1122 EWVVYHELVMTTKEYMREVTAIDPKWLVEFAPSFFKIGDS-TKLSTFKRNQK 1172
Score = 73 (30.8 bits), Expect = 5.0e-190, Sum P(2) = 5.0e-190
Identities = 46/188 (24%), Positives = 67/188 (35%)
Query: 53 RAVEKGG-GSQIDDGFKVPRVASVAASIDEEEKSESSGIDEVVSNATNGKRSHASRRYRE 111
+A++ G G Q DD + + S+ +K G D + + K SH +
Sbjct: 47 KALDSQGLGDQFDDSLTAT-ILRIVQSMTAVKKKNKKGGD----SKEDIKDSHKITLISD 101
Query: 112 TSARDITDAENPMAVGRAGETAGTHRSNEHAYVEXXXXXXXXXXXXXXXXRHDRDDRGSE 171
A++ A P A+ A TA NE + + R
Sbjct: 102 --AKEEIKARLP-ALAMAN-TAKEKEDNEDDLMAQLEKMEGRYESEKRLQKESDSKRNRS 157
Query: 172 RKYLKDDTRSESRGPSRRDNYDSKGRYRGRE-ARDRDEPEYGGEYGRKRSKYDGTRRTPG 230
R + +R R SR + D + R R RE RDRD + + R R G R
Sbjct: 158 RS--RSRSRDRKRRRSRSGDRDRRRRSRSREDRRDRDRRDRDRDRDRGRGDRRGDDRQRD 215
Query: 231 RSDW-DDG 237
R D DDG
Sbjct: 216 RRDRRDDG 223
Score = 68 (29.0 bits), Expect = 1.7e-189, Sum P(2) = 1.7e-189
Identities = 29/90 (32%), Positives = 40/90 (44%)
Query: 170 SERKYLKDDTRSESRGPSRRDNYDSKGRYRGREA-RDRDEPEYGGEYGRKRSKYDGTR-R 227
SE++ K+ +R SR + D K R R R RDR E R R + D R R
Sbjct: 142 SEKRLQKESDSKRNRSRSRSRSRDRKRR-RSRSGDRDRRRRSRSREDRRDRDRRDRDRDR 200
Query: 228 TPGRSD--WDDGRWEWEDTPRREGYSNSSK 255
GR D DD + + D R +G + S+
Sbjct: 201 DRGRGDRRGDDRQRDRRDR-RDDGGARKSE 229
Score = 61 (26.5 bits), Expect = 9.3e-189, Sum P(2) = 9.3e-189
Identities = 23/62 (37%), Positives = 27/62 (43%)
Query: 162 RHDRD--DRGSERKYLKDDTRSESRGPSRRDNYDSKGRYRGREARDRDEPEYGGEY-GRK 218
R DRD DR +R + D R + R RRD D G AR + E G Y GR
Sbjct: 188 RRDRDRRDRDRDRDRGRGDRRGDDRQRDRRDRRDDGG------ARKSEVAEIGKIYDGRV 241
Query: 219 RS 220
S
Sbjct: 242 NS 243
Score = 45 (20.9 bits), Expect = 4.6e-187, Sum P(2) = 4.6e-187
Identities = 18/60 (30%), Positives = 29/60 (48%)
Query: 71 RVASVAASIDEEEKSESSGIDEVVSNATNGKRSHASRRYRETSARDITDAE---NPMAVG 127
RV +VA D ++ E+ + V+ NGK S + + + S D+ E NP A+G
Sbjct: 273 RVQTVA---DVLKRGENVKVK--VNKIENGKISLSMKEVDQNSGEDLNPRETDLNPDAIG 327
>ASPGD|ASPL0000070923 [details] [associations]
symbol:AN4721 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003723
EMBL:BN001303 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 EMBL:AACD01000080 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
OMA:NAWCYEN OrthoDB:EOG45TGW9 RefSeq:XP_662325.1
ProteinModelPortal:Q5B409 EnsemblFungi:CADANIAT00005708
GeneID:2872518 KEGG:ani:AN4721.2 Uniprot:Q5B409
Length = 1241
Score = 1792 (635.9 bits), Expect = 2.8e-189, Sum P(2) = 2.8e-189
Identities = 366/823 (44%), Positives = 519/823 (63%)
Query: 415 KKLSQITADNHQWEERQLLRSGAVRGTE-----------LSTEFDDEEEHKVILLVHDTK 463
K ++T+ +WE +QL+ SGAV + L+ E EEE + + V D +
Sbjct: 398 KNRKRLTSPE-RWEIKQLIASGAVSAADYPDIDEEYHATLTGEGTFEEEEDIDIEVRDEE 456
Query: 464 PPFLDGRIVFTKQAEPVMPIKDPTSDMAIISRKGSALVREIREKQTQNKSRQRFWELAGS 523
P FL G+ + + P+ +K P M + G+ L +E RE + Q + + AG
Sbjct: 457 PAFLAGQTKMSLELSPIRVVKAPDGSMNRSAMAGTNLAKERRELRQQEAQDKAAEQAAGV 516
Query: 524 QMGNILGVKKTAEQVDADTAVVGEQGEIDFREDAKFSQHMKKGEAVSDFAK--SKTLAEQ 581
+ +E+ A +Q D E + + G+ S F K + ++ +Q
Sbjct: 517 DLNAQWQDPMASERKFAADLRSTQQTGTD--EAVPEWKRVTMGKTPS-FGKRTNMSIKQQ 573
Query: 582 RQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNGIVGCTQPRRV 641
R+ LP++ R +LL+ + ENQ G+TGSGKTTQ+TQYL E G+ GI+GCTQPRRV
Sbjct: 574 RESLPVYKFRQQLLEAVAENQLLIVVGDTGSGKTTQVTQYLAEAGWANKGIIGCTQPRRV 633
Query: 642 AAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDSDLDKYRV 701
AAMSVAKRV+EE+ +LG +VGY IRFED T P T IKYMTDG+L RE L D DL KY V
Sbjct: 634 AAMSVAKRVAEEVGCKLGAEVGYTIRFEDCTSPETKIKYMTDGMLQREVLLDPDLKKYSV 693
Query: 702 IVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPIFHIPGRT 761
I++DEAHER+++TDVLFG+LK + RR D +LIVTSATL+A KFS++F PIF IPGRT
Sbjct: 694 IMLDEAHERTIATDVLFGLLKTTLKRRPDLRLIVTSATLDADKFSEYFYGCPIFSIPGRT 753
Query: 762 FPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQLI 821
FPV +YSK P DY++AA+ M IH+T PPGD+L+F+TGQ+EI+ AC L ERM+ L
Sbjct: 754 FPVEIMYSKEPESDYLDAALITVMQIHLTEPPGDMLLFLTGQEEIDTACEILYERMKALG 813
Query: 822 SSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDT 881
S VPEL+ILP+YS LP+++Q++IF+ A G RK ++ATNIAETS+T+D I+YVID
Sbjct: 814 PS----VPELVILPVYSALPSEMQSRIFDPAPPGGRKVVIATNIAETSITIDNIYYVIDP 869
Query: 882 GYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPV 941
G+ K K Y+PK+GMD+L V P+S C+RLYTE+AY +EMLP+ +
Sbjct: 870 GFVKQKAYDPKLGMDSLVVTPISQAQAKQRAGRAGRTGPGKCFRLYTEAAYQSEMLPTTI 929
Query: 942 PEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNVGALTDLG 1001
P+IQR NL + + FDFMDPPP +L ++ +L+ L AL++ G LT LG
Sbjct: 930 PDIQRQNLSHTILMLKAMGINDLLHFDFMDPPPTNTMLTALEELYALSALDDEGLLTRLG 989
Query: 1002 WKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAAREKFFV 1061
KM +FP++P LAK+L+ +GC +E+L+IV+MLS+ SVF+RPK++ +++D + KF
Sbjct: 990 RKMADFPMEPALAKVLIASVDMGCSEEMLSIVAMLSIQSVFYRPKEKQQQADQKKAKFHD 1049
Query: 1062 QESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQLLDILKTLKIPLTSSG 1121
DHLTLL VY WK + WC E+++ + +R+A++VR QLL I++ + S G
Sbjct: 1050 PHGDHLTLLNVYNAWKRSGFSNAWCYENFIQARQIRRAQDVRQQLLGIMQRYHHKIVSCG 1109
Query: 1122 HDFDVVRKAICSAYFHNAARLKGVGEYINCRNGMPCHLHPSSAIYGLGYTPEYVVYHELI 1181
+ VR+A+C+ +F N+AR Y G P ++HPSSA++G E+V+YH L+
Sbjct: 1110 RNTTKVRQALCTGFFRNSARKDPQEGYKTLVEGTPVYMHPSSAMFGK--PAEHVIYHTLV 1167
Query: 1182 LTTKEYMQCATAVEPQWLSELGPMFFSVKDSDTSMLEHKKKQK 1224
LTTKEYM C T +EP+WL E P FF V +D + + KK ++
Sbjct: 1168 LTTKEYMHCTTGIEPKWLVEAAPTFFKVAPTDR-LSKRKKAER 1209
Score = 65 (27.9 bits), Expect = 2.8e-189, Sum P(2) = 2.8e-189
Identities = 31/106 (29%), Positives = 41/106 (38%)
Query: 170 SERKYLKDDTRSESRGPSRRDNYDSK---GRYRGREARDRDEPEYGGEYGRKRSKYDGT- 225
+E + + RS SR P D+Y + RYR R P Y R D
Sbjct: 173 TESRPVSKRKRSRSRSPEY-DDYSRRRRRDRYRSRSRSRSRSPAYNK---RDEDPVDEFG 228
Query: 226 RRTPGRSDWDDGRWEWED-TPRREGYSNSSKRYQPSPSPMFVGASP 270
R T GRS DD E+ D R + + Y P P+ + SP
Sbjct: 229 RSTGGRSSNDD---EYRDGRSERRRRRRADEDYFRKPPPVELDDSP 271
Score = 64 (27.6 bits), Expect = 3.5e-189, Sum P(2) = 3.5e-189
Identities = 50/198 (25%), Positives = 68/198 (34%)
Query: 45 KAQSGLGVRAVEKGGGSQIDDGFKVPRVASVAASIDEEEKSESSGIDEVVSNATNGKRSH 104
K + G VE G +D + + A V + ++ E +E N
Sbjct: 82 KNKKDRGDEHVENGASDDMDALNALEKKARVFKGLAVPDQ-EPGWAEEEYMEVGNKNGLG 140
Query: 105 ASRRYRETSARDITDAENPMAVGRAGET-AGTHRSNEHAYVEXXXXXXXXXXXXXXXXRH 163
+ SA D T A M G AG+ A T E V R
Sbjct: 141 VDEHDAKDSAMDDTFA---MLEGLAGKARAKTTTITESRPVSKRKRSRSRSPEYDDYSRR 197
Query: 164 DRDDRGSERKYLKDDTRSESRGPS--RRDN--YDSKGRYRGREARDRDEPEYGGEYGRKR 219
R DR R +RS SR P+ +RD D GR G + + DE G R+R
Sbjct: 198 RRRDRYRSR------SRSRSRSPAYNKRDEDPVDEFGRSTGGRSSNDDEYRDGRSERRRR 251
Query: 220 SKYDGTR-RTPGRSDWDD 236
+ D R P + DD
Sbjct: 252 RRADEDYFRKPPPVELDD 269
>UNIPROTKB|F1P306 [details] [associations]
symbol:LOC100858239 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967
SMART:SM00316 GeneTree:ENSGT00700000104241 EMBL:AADN02070153
EMBL:AADN02070154 IPI:IPI00591627 Ensembl:ENSGALT00000001801
OMA:AMANTAM Uniprot:F1P306
Length = 1168
Score = 1774 (629.5 bits), Expect = 1.2e-188, Sum P(2) = 1.2e-188
Identities = 348/668 (52%), Positives = 461/668 (69%)
Query: 558 KFSQHMKKGEAVSDFAKSK-TLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTT 616
++ +H G S K++ ++ EQR+ LPIF ++++L+Q + +NQ GETGSGKTT
Sbjct: 485 EWKKHAFGGNKASYGKKTQLSIIEQRESLPIFRLKEQLIQAVHDNQILIVIGETGSGKTT 544
Query: 617 QLTQYLLEDGYTTNGIVGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPST 676
Q+TQYL E GYT+ G +GCTQPRRVAAMSVAKRVSEE LG +VGY IRFED T P T
Sbjct: 545 QITQYLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPET 604
Query: 677 LIKYMTDGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVT 736
+IKYMTDG+LLRE L D DL +Y +I++DEAHER++ TDVLFG+LKK V +R+D KLIVT
Sbjct: 605 VIKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVT 664
Query: 737 SATLNAQKFSDFFGSVPIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDI 796
SATL+A KFS +F PIF IPGRT+PV LY+K P DY++A++ M IH+T PPGDI
Sbjct: 665 SATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDI 724
Query: 797 LIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGT 856
L+F+TGQ+EI+ AC L ERM+ L +VPEL+ILP+YS LP+++Q +IF+ A G+
Sbjct: 725 LVFLTGQEEIDTACEILYERMKSL----GPDVPELIILPVYSALPSEMQTRIFDPAPPGS 780
Query: 857 RKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXX 916
RK ++ATNIAETSLT+DGI+YV+D G+ K KVYN K G+D L V P+S
Sbjct: 781 RKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAG 840
Query: 917 XXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQE 976
CYRLYTE AY +EML + VPEIQRTNL + V FDFMD PP E
Sbjct: 841 RTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPME 900
Query: 977 NILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSML 1036
++ +M QL+ LGAL++ G LT LG +M EFPL+P L KML+M LGC +E+LTIVSML
Sbjct: 901 TLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSML 960
Query: 1037 SVPSVFFRPKDRAEESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSL 1096
SV +VF+RPKD+ +D + KF E DHLTLL VY WK +++ WC E+++ +SL
Sbjct: 961 SVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSL 1020
Query: 1097 RKAREVRSQLLDILKTLKIPLTSSGHDFDVVRKAICSAYFHNAARLKGVGEYINCRNGMP 1156
R+A+++R Q+L I+ K+ + S G V+KAICS +F NAA+ Y +
Sbjct: 1021 RRAQDIRKQMLGIMDRHKLDVVSCGKATVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQV 1080
Query: 1157 CHLHPSSAIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFFSVKDSDTSM 1216
++HPSSA++ PE+VVYHEL+LTTKEYM+ T ++P+WL E P FF V D T +
Sbjct: 1081 VYIHPSSALFNR--QPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDP-TKL 1137
Query: 1217 LEHKKKQK 1224
+ KK+Q+
Sbjct: 1138 SKQKKQQR 1145
Score = 77 (32.2 bits), Expect = 1.2e-188, Sum P(2) = 1.2e-188
Identities = 36/164 (21%), Positives = 58/164 (35%)
Query: 70 PRVASVAASIDEEEKSESSGIDEVVSNATNGKRSHASRRYRETSARDITDAENPM-AVGR 128
P S + + + KSE + E+ + E + DA + A+
Sbjct: 88 PSKPSTSKEVVTKPKSEKERLKELFPALCRPDNPNVRNMLDEDDVKVAADALKELEALMP 147
Query: 129 AGETAGTHRSNEHAYVEXXXXXXXXXXXXXXXXRH---------DRD-DRGSERKYLKDD 178
+ + G ++++H + RH RD +RG R Y +
Sbjct: 148 SADRQGKQKNSDHRLLRAKKKRRSRSRSRDRKRRHRSRSRSRSRTRDRNRGKSRYYSRSR 207
Query: 179 TRSESRGPSRRDNYDSKGRYRGREAR-DR---DEPEYGGEYGRK 218
+RS SR RD Y + R R+ DR +EP G Y K
Sbjct: 208 SRSPSRDRRDRDKYLERSNERWRDKHVDRPPPEEPSIGDIYNGK 251
Score = 64 (27.6 bits), Expect = 2.8e-187, Sum P(2) = 2.8e-187
Identities = 28/103 (27%), Positives = 45/103 (43%)
Query: 168 RGSERKYL--KDDTRSESRGPSRRDNYDSKGRYRGREARDRDEPEYGGEYGRKRSKYDGT 225
+ S+ + L K RS SR R+ + S+ R R R RDR+ + Y R RS
Sbjct: 156 KNSDHRLLRAKKKRRSRSRSRDRKRRHRSRSRSRSR-TRDRNRGK-SRYYSRSRS----- 208
Query: 226 RRTPGRSDWDDGRWEWEDTPR-REGYSNSSKRYQPSPSPMFVG 267
R+P R D ++ R R+ + + +PS ++ G
Sbjct: 209 -RSPSRDRRDRDKYLERSNERWRDKHVDRPPPEEPSIGDIYNG 250
Score = 39 (18.8 bits), Expect = 1.2e-184, Sum P(2) = 1.2e-184
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 566 GEAVSDFAKSKTLAEQRQYLPIFS 589
GEA++D A + LA+ +YL + S
Sbjct: 3 GEAMADLAALEELAKL-EYLSLVS 25
>SGD|S000001794 [details] [associations]
symbol:PRP16 "DEAH-box RNA helicase involved in second
catalytic step of splicing" species:4932 "Saccharomyces cerevisiae"
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0000350 "generation of catalytic
spliceosome for second transesterification step" evidence=IMP]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0071007 "U2-type catalytic step 2 spliceosome" evidence=IDA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IDA]
[GO:0000386 "second spliceosomal transesterification activity"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000001794 GO:GO:0005524 GO:GO:0003676
EMBL:BK006944 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0071007 EMBL:Z27116 GO:GO:0008186
RefSeq:NP_013012.3 GeneID:853961 KEGG:sce:YKR086W KO:K12815
GO:GO:0000350 GeneTree:ENSGT00700000104877 OrthoDB:EOG4GQTD2
EMBL:M31524 EMBL:Z28311 PIR:S38164 RefSeq:NP_013014.3
ProteinModelPortal:P15938 SMR:P15938 DIP:DIP-2824N IntAct:P15938
MINT:MINT-1699731 STRING:P15938 PaxDb:P15938 PeptideAtlas:P15938
EnsemblFungi:YKR086W GeneID:853963 KEGG:sce:YKR088C CYGD:YKR086w
OMA:IDCGYSK NextBio:975386 Genevestigator:P15938 GermOnline:YKR086W
Uniprot:P15938
Length = 1071
Score = 1765 (626.4 bits), Expect = 7.6e-185, Sum P(2) = 7.6e-185
Identities = 357/762 (46%), Positives = 500/762 (65%)
Query: 464 PPFLDGRIVFTKQAEPVM--PIKDPTSDMAIISRKGSALVREIREKQTQ-NKSRQRFWEL 520
PPFL + K ++ I + +S ++ +S +V R ++ + + +R +L
Sbjct: 230 PPFLSKFALENKVPTSIIIGSISETSSQVSALS-----MVNPFRNPDSEFSANAKRGSKL 284
Query: 521 AGSQMGNILGVKKTAEQVDADTAVVGEQGEIDFREDAKFSQHMKKGEAVSDFAKSKT-LA 579
+ N+ ++++ + +GE ++ AK + K + + F SK +
Sbjct: 285 VALRRINMEHIQQSRDNTTVLNTAMGEVLGLENNNKAKDKSNQKICDDTALFTPSKDDIK 344
Query: 580 EQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTN-G-IVGCTQ 637
++ LP+F R +LL +IRENQ GETGSGKTTQL QYL E+GY + G + TQ
Sbjct: 345 HTKEQLPVFRCRSQLLSLIRENQVVVIIGETGSGKTTQLAQYLYEEGYANDRGKSIVVTQ 404
Query: 638 PRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPS-TLIKYMTDGVLLRETLKDSDL 696
PRRVAA+SVAKRV+ EM LG +VGY+IRFEDVT T +K++TDG+LLRETL D L
Sbjct: 405 PRRVAAISVAKRVAMEMQVPLGKEVGYSIRFEDVTDSECTKLKFVTDGILLRETLLDDTL 464
Query: 697 DKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPIFH 756
DKY +++DEAHERSL+TD+L G K ++ARRRD KLI+TSAT+NA+KFS FFG+ P F
Sbjct: 465 DKYSCVIIDEAHERSLNTDILLGFFKILLARRRDLKLIITSATMNAKKFSAFFGNAPQFT 524
Query: 757 IPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSP--PGDILIFMTGQDEIEAACFALK 814
IPGRTFPV T+Y+ P +DYVEAAV QA+ IH+ + GDILIFMTGQ++IE L+
Sbjct: 525 IPGRTFPVQTIYTSNPVQDYVEAAVSQAVKIHLANDCSSGDILIFMTGQEDIETTFDTLQ 584
Query: 815 ERMEQLIS-----STTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETS 869
E+ Q+ S + E+ ++ ILPIYS LPADLQ KIF+ RK I+ATNIAETS
Sbjct: 585 EKFLQVYSKKFGTANFEEINDIEILPIYSALPADLQFKIFQDLHGTKRKIIIATNIAETS 644
Query: 870 LTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTE 929
LT+ GI YVID GY K+KVYNPK+G+D+L + P+S YRLYTE
Sbjct: 645 LTIKGIRYVIDCGYSKLKVYNPKIGLDSLVITPISKANADQRSGRAGRTAPGTAYRLYTE 704
Query: 930 SAYLNEMLPSPVPEIQRTNLGN-VVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVL 988
+ +M +PEIQRTNL N ++ F F+D PP + L+S+Y+LW +
Sbjct: 705 DTFKEDMYLQTIPEIQRTNLSNTLLLLKSLDVTDELSKFPFIDKPPLQTFLSSLYELWFI 764
Query: 989 GALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDR 1048
GA++ G LT LG +M +FPL P L+K+LL+ + GC DE+LTIVSMLSVP VF+RPK+R
Sbjct: 765 GAIDTSGQLTPLGLQMAKFPLQPSLSKILLIAVRNGCSDEMLTIVSMLSVPQVFYRPKER 824
Query: 1049 AEESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQLLD 1108
+E+D AR KFF+ +SDHLTLL V++QW+ + + WC +H++ KSL +AR++R QLL
Sbjct: 825 QKEADIARNKFFIAKSDHLTLLNVFEQWRANNFSSHWCNKHFVQYKSLVRARDIRDQLLT 884
Query: 1109 ILKTLKIPLTSSGHDFDVVRKAICSAYFHNAARLKGVGEYINCRNGMPCHLHPSSAIYGL 1168
ILK+ KIP+ SSG D+D+++K ICS + H AA++ G+ Y++ + G+ LHP+SA++GL
Sbjct: 885 ILKSQKIPVISSGKDWDIIKKCICSGFAHQAAKITGLRNYVHLKTGVSVQLHPTSALHGL 944
Query: 1169 GYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFFSVK 1210
G P YVVYHEL++T+KEY+ C T+V+P WL E G + + +K
Sbjct: 945 GDLPPYVVYHELLMTSKEYICCVTSVDPFWLMEYGGLLYDIK 986
Score = 50 (22.7 bits), Expect = 7.6e-185, Sum P(2) = 7.6e-185
Identities = 15/46 (32%), Positives = 23/46 (50%)
Query: 325 SRESSQSFEDGVADETYSEEHNYEITESMRLEMEYNSDRAWYDREE 370
S S Q ++G ++E +YE T S +E DR WYD ++
Sbjct: 143 SPNSEQQTQNG-----HAETKDYEPTRSEVVE----EDREWYDNDD 179
Score = 44 (20.5 bits), Expect = 3.3e-184, Sum P(2) = 3.3e-184
Identities = 12/56 (21%), Positives = 24/56 (42%)
Query: 475 KQAEPVMP-IKDPTSDMAIISRKGSALVREIREKQTQNKSRQRFWELAGSQMGNIL 529
KQ P +KDP+ + ++ G A ++ +++ R W GN++
Sbjct: 130 KQLRQYSPTVKDPSPNSEQQTQNGHAETKDYEPTRSEVVEEDREWYDNDDDYGNLV 185
>POMBASE|SPAC10F6.02c [details] [associations]
symbol:prp22 "ATP-dependent RNA helicase Prp22"
species:4896 "Schizosaccharomyces pombe" [GO:0000390 "spliceosomal
complex disassembly" evidence=ISS] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005681 "spliceosomal complex"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
PomBase:SPAC10F6.02c GO:GO:0005524 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0005681 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GO:GO:0000390 KO:K12818
OMA:NAWCYEN PIR:T37496 RefSeq:NP_593253.1 ProteinModelPortal:O42643
IntAct:O42643 STRING:O42643 PRIDE:O42643
EnsemblFungi:SPAC10F6.02c.1 GeneID:2542978 KEGG:spo:SPAC10F6.02c
OrthoDB:EOG45TGW9 NextBio:20804011 Uniprot:O42643
Length = 1168
Score = 1731 (614.4 bits), Expect = 4.3e-182, Sum P(2) = 4.3e-182
Identities = 353/816 (43%), Positives = 519/816 (63%)
Query: 427 WEERQLLRSGAVRGTEL-----------STEFDDEEEHKVILLVHDTKPPFLDGRIVFTK 475
WE +QL SGA+ T++ + E + E++ V + + + +P FL G+ +
Sbjct: 340 WELQQLAASGAISATDIPELNDGFNTNNAAEINPEDDEDVEIELREEEPGFLAGQTKVSL 399
Query: 476 QAEPVMPIKDPTSDMAIISRKGSALV---REIREKQTQNKSRQRF--WELAGSQMGNILG 530
+ P+ +K P ++ + +G L REIR+K+ + KS Q +L+ S +
Sbjct: 400 KLSPIKVVKAPDGSLSRAAMQGQILANDRREIRQKEAKLKSEQEMEKQDLSLSWQDTMSN 459
Query: 531 V--KKTAEQVDADTAVVGEQGEIDFREDAKFSQHMKKGEAVSDFAKSKTLAEQRQYLPIF 588
+K A+ V D+A E A + ++ G+ + ++ EQR+ LP+F
Sbjct: 460 PQDRKFAQDV-RDSAARQLTSETPSWRQATRNANISYGKRTT-----LSMKEQREGLPVF 513
Query: 589 SVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNG-IVGCTQPRRVAAMSVA 647
+R + L+ + +NQ GETGSGKTTQ+TQYL E+GYT++ ++GCTQPRRVAAMSVA
Sbjct: 514 KLRKQFLEAVSKNQILVLLGETGSGKTTQITQYLAEEGYTSDSKMIGCTQPRRVAAMSVA 573
Query: 648 KRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDSDLDKYRVIVMDEA 707
KRV+EE+ +G++VGY IRFED T T IKYMTDG+L RE L D L KY VI++DEA
Sbjct: 574 KRVAEEVGCRVGEEVGYTIRFEDKTSRMTQIKYMTDGMLQRECLVDPLLSKYSVIILDEA 633
Query: 708 HERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPIFHIPGRTFPVNTL 767
HER+++TDVLFG+LK V +R D KLIVTSATL+A++FS +F PIF IPGR++PV +
Sbjct: 634 HERTVATDVLFGLLKGTVLKRPDLKLIVTSATLDAERFSSYFYKCPIFTIPGRSYPVEIM 693
Query: 768 YSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQLISSTTRE 827
Y+K P DY++AA+ M IH++ PGDIL+F+TGQ+EI+ +C L ER + L S
Sbjct: 694 YTKQPEADYLDAALMTVMQIHLSEGPGDILVFLTGQEEIDTSCEILYERSKMLGDS---- 749
Query: 828 VPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMK 887
+PEL+ILP+YS LP+++Q++IFE A G RK ++ATNIAETSLT+DGI+YV+D G+ K
Sbjct: 750 IPELVILPVYSALPSEIQSRIFEPAPPGGRKVVIATNIAETSLTIDGIYYVVDPGFVKQS 809
Query: 888 VYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRT 947
++PK+GMD+L V P+S CYRLYTESAY NEMLPSP+PEIQR
Sbjct: 810 CFDPKLGMDSLIVTPISQAQARQRSGRAGRTGPGKCYRLYTESAYRNEMLPSPIPEIQRQ 869
Query: 948 NLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEF 1007
NL + + FDFMDPPP + ++ ++ L+ L AL++ G LT LG KM +F
Sbjct: 870 NLSHTILMLKAMGINDLLNFDFMDPPPAQTMIAALQNLYALSALDDEGLLTPLGRKMADF 929
Query: 1008 PLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAAREKFFVQESDHL 1067
P++P L+K+L+ +LGC +E+L+I++MLSVP+++ RP+++ +E+D R +F ESDHL
Sbjct: 930 PMEPQLSKVLITSVELGCSEEMLSIIAMLSVPNIWSRPREKQQEADRQRAQFANPESDHL 989
Query: 1068 TLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQLLDILKTLKIPLTSSGHDFDVV 1127
TLL VY WK ++ +WC EHY+ + +R+A +VR QL+ ++ + P+ S G +++
Sbjct: 990 TLLNVYTTWKMNRCSDNWCYEHYIQARGMRRAEDVRKQLIRLMDRYRHPVVSCGRKRELI 1049
Query: 1128 RKAICSAYFHNAARLKG-VGEYINCRNGMPCHLHPSSAIYGLGYTPEYVVYHELILTTKE 1186
+A+CS YF N A+ G Y P ++HPS ++G E+V+YHELI T+KE
Sbjct: 1050 LRALCSGYFTNVAKRDSHEGCYKTIVENAPVYMHPSGVLFGKA--AEWVIYHELIQTSKE 1107
Query: 1187 YMQCATAVEPQWLSELGPMFFSVKDSDTSMLEHKKK 1222
YM + V P+WL E+ P FF K ++ + + KK
Sbjct: 1108 YMHTVSTVNPKWLVEVAPTFF--KFANANQVSKTKK 1141
Score = 58 (25.5 bits), Expect = 4.3e-182, Sum P(2) = 4.3e-182
Identities = 27/131 (20%), Positives = 51/131 (38%)
Query: 60 GSQIDDGFKVPRVASVAASIDEEEKSESSGIDEVVSNATNGKRSHASRRYRETSARDITD 119
G + D F + ++ + I ++ + ++ SN+ NG SH + ++D+
Sbjct: 56 GGEFTDSF-LQNISRLIKEIKPKDDIPTDNVNNG-SNSVNGA-SH------DLDSKDVDK 106
Query: 120 A-ENPMAVGRAGETAGTHRSNEHAYVEXXXXXXXXXXXXXXXXRHDRDDRGSERKYLKD- 177
+ M G + + + + A ++ R+DRD R ER YL
Sbjct: 107 QHQRKMFPGLSIPNSTNNLRDRPALMDNAMDELEELSTLAKTRRNDRDSRRDERHYLNGI 166
Query: 178 -DTRSESRGPS 187
+ R S PS
Sbjct: 167 RERRERSISPS 177
Score = 37 (18.1 bits), Expect = 7.1e-180, Sum P(2) = 7.1e-180
Identities = 7/25 (28%), Positives = 13/25 (52%)
Query: 62 QIDDGFKVPRVASVAASIDEEEKSE 86
+++DGF A + DE+ + E
Sbjct: 358 ELNDGFNTNNAAEINPEDDEDVEIE 382
>UNIPROTKB|F5H658 [details] [associations]
symbol:DHX8 "ATP-dependent RNA helicase DHX8" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0005634
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
HGNC:HGNC:2749 EMBL:AC068675 EMBL:AC087650 IPI:IPI01010550
ProteinModelPortal:F5H658 SMR:F5H658 Ensembl:ENST00000540306
UCSC:uc010wig.2 ArrayExpress:F5H658 Bgee:F5H658 Uniprot:F5H658
Length = 1181
Score = 1704 (604.9 bits), Expect = 1.0e-178, Sum P(2) = 1.0e-178
Identities = 359/769 (46%), Positives = 493/769 (64%)
Query: 413 QSKKLSQITADNHQWEERQLLRSGAVRGTE---------LSTEFDDEEEHKVILLVHDTK 463
+ K+L++I+ D +WE +Q++ + + E + + DDEE+ + + + + +
Sbjct: 387 ERKRLTRIS-DPEKWEIKQMIAANVLSKEEFPDFDEETGILPKVDDEEDEDLEIELVEEE 445
Query: 464 PPFLDGRIVFTKQAEPVMPIKDPTSDMAIISRKGSALVREIREKQTQNKSRQRFWELAGS 523
PPFL G + P+ +K+P ++ + SAL +E RE K QR E+
Sbjct: 446 PPFLRGHTKQSMDMSPIKIVKNPDGSLSQAAMMQSALAKERREL----KQAQREAEMDSI 501
Query: 524 QMG-NILGVKKT--AE--QVDADTAVVGEQGEIDFREDAKFSQHMKKGEAVSDFAKSK-T 577
MG N V AE Q+ A+ +G D E + +H G S K++ +
Sbjct: 502 PMGLNKHWVDPLPDAEGRQIAANMRGIGMMPN-DIPE---WKKHAFGGNKASYGKKTQMS 557
Query: 578 LAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNGIVGCTQ 637
+ EQR+ LPI+ ++++L+Q + +NQ GETGSGKTTQ+TQYL E GYT+ G +GCTQ
Sbjct: 558 ILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIGCTQ 617
Query: 638 PRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDSDLD 697
PRRVAAMSVAKRVSEE LG +VGY IRFED T P T+IKYMTDG+LLRE L D DL
Sbjct: 618 PRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLT 677
Query: 698 KYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPIFHI 757
+Y +I++DEAHER++ TDVLFG+LKK V +R+D KLIVTSATL+A KFS +F PIF I
Sbjct: 678 QYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTI 737
Query: 758 PGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERM 817
PGRT+PV LY+K P DY++A++ M IH+T PPGDIL+F+TGQ+EI+ AC L ERM
Sbjct: 738 PGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERM 797
Query: 818 EQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFY 877
+ L +VPEL+ILP+YS LP+++Q +IF+ A G+RK ++ATNIAETSLT+DGI+Y
Sbjct: 798 KSL----GPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYY 853
Query: 878 VIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEML 937
V+D G+ K KVYN K G+D L V P+S CYRLYTE AY +EML
Sbjct: 854 VVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEML 913
Query: 938 PSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNVGAL 997
+ VPEIQRTNL + V FDFMD PP E ++ +M QL+ LGAL++ G L
Sbjct: 914 TTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLL 973
Query: 998 TDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAARE 1057
T LG +M EFPL+P L KML+M LGC +E+LTIVSMLSV +VF+RPKD+ +D +
Sbjct: 974 TRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKA 1033
Query: 1058 KFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQLLDILKTLKIPL 1117
KF E DHLTLL VY WK +++ WC E+++ +SLR+A+++R Q+L I+ K+ +
Sbjct: 1034 KFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDV 1093
Query: 1118 TSSGHDFDVVRKAICSAYFHNAARLKGVGEYINCRNGMPCHLHPSSAIY 1166
S G V+KAICS +F NAA+ Y + ++HPSSA++
Sbjct: 1094 VSCGKSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALF 1142
Score = 53 (23.7 bits), Expect = 1.0e-178, Sum P(2) = 1.0e-178
Identities = 18/61 (29%), Positives = 27/61 (44%)
Query: 164 DRDDRGSERKYLKDDTRSESRGPSRRDNYDSKGRYRGRE---ARDRDEPEYGGEYGRKRS 220
DR + +R +D R R R + D K R+R R +R R+ + Y R RS
Sbjct: 169 DRTKK-KKRSRSRDRNRDRDRDRERNRDRDHKRRHRSRSRSRSRTRERNKVKSRY-RSRS 226
Query: 221 K 221
+
Sbjct: 227 R 227
>CGD|CAL0004768 [details] [associations]
symbol:PRP22 species:5476 "Candida albicans" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IEA] [GO:0071021
"U2-type post-spliceosomal complex" evidence=IEA] [GO:0000350
"generation of catalytic spliceosome for second transesterification
step" evidence=IEA] [GO:0000390 "spliceosomal complex disassembly"
evidence=IEA] [GO:0000386 "second spliceosomal transesterification
activity" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0004768 GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AACQ01000012 InterPro:IPR022967 SMART:SM00316
KO:K12818 EMBL:AACQ01000011 RefSeq:XP_721941.1 RefSeq:XP_722102.1
ProteinModelPortal:Q5AJY8 STRING:Q5AJY8 GeneID:3636272
GeneID:3636404 KEGG:cal:CaO19.11516 KEGG:cal:CaO19.4033
Uniprot:Q5AJY8
Length = 996
Score = 1726 (612.6 bits), Expect = 9.3e-178, P = 9.3e-178
Identities = 361/841 (42%), Positives = 522/841 (62%)
Query: 413 QSKKLSQITADNHQWEERQLLRSGAVRGT---ELSTEFDDEEEHKVILLVH----DTKPP 465
Q + ++T+ +WE RQL+ SGAV EL E D + E + +H D KP
Sbjct: 167 QPRPKRKLTSPE-RWEIRQLISSGAVSADDYPELDQEEDTQTESEKTDNLHIELNDKKPD 225
Query: 466 FLDGRIVFTKQAEPVMPIK-DPTSDMAIISRKGSALVREIREKQTQNKSRQRFWELAGSQ 524
FL G + TK PI + + + +++GS R+ +E++ + K ++ E S+
Sbjct: 226 FLKG-VKVTKDFPETTPIPVNQSGPLTKSAQRGSKFARDFKEEKFKQKKQREKEEKMQSE 284
Query: 525 MGNILGVKKTAEQVDADTAVVGEQGEIDFREDAKFSQHMKKGEAVSDFAKSKTLA--EQR 582
+ + L +T+E V + ++D + F KK F K +L EQR
Sbjct: 285 LSDPLF--QTSEPV--------KNSDLD-PDTESFISKWKKSNKTETFGKRTSLPIQEQR 333
Query: 583 QYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNG----IVGCTQP 638
+ LP++++R +LL+ IR+NQ GETGSGKTTQ+ QY+ E+G G ++GCTQP
Sbjct: 334 RMLPVYAMRSQLLEAIRDNQFVVIVGETGSGKTTQIVQYIYEEGMNKVGGQTKLIGCTQP 393
Query: 639 RRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDSDLDK 698
RRVAA SVAKRVSEE+ +LGD VGY IRFEDVT +T+IKYMTDG+L RE L D ++++
Sbjct: 394 RRVAAESVAKRVSEEVGCKLGDTVGYTIRFEDVTSENTVIKYMTDGMLEREALNDPNMNR 453
Query: 699 YRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPIFHIP 758
Y VI++DEAHER+++TDVLF +LK + + K+IVTSATL++ KFS +F + PI IP
Sbjct: 454 YSVIMLDEAHERTIATDVLFALLKNAAKQNPNLKVIVTSATLDSNKFSRYFNNCPIITIP 513
Query: 759 GRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERME 818
GRTFPV LY+K P DY+ AA++ + IH++ P GDIL+F+TGQ+EIE +C AL ERM+
Sbjct: 514 GRTFPVEVLYTKAPEMDYLAAALESVIQIHVSEPAGDILVFLTGQEEIETSCEALHERMK 573
Query: 819 QLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYV 878
L +PEL+ILP+YS LP+++Q +IFE G+RK I+ATNIAETS+T+DGI+YV
Sbjct: 574 LL----GENIPELIILPVYSALPSEMQTRIFEPTPPGSRKVILATNIAETSITIDGIYYV 629
Query: 879 IDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLP 938
+D G+ K+ +Y+ K+GMD+L+V P+S CYRLYTE AY EM+P
Sbjct: 630 VDPGFVKINMYDSKLGMDSLRVTPISKAQANQRSGRAGRTGPGKCYRLYTEQAYEKEMIP 689
Query: 939 SPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNVGALT 998
+ +PEIQR NL + + F+FMDPP +L ++ L++L AL++ G LT
Sbjct: 690 NTIPEIQRQNLSHTILMLKAMGIHDLVNFEFMDPPSTTTMLTALEDLYILDALDDDGNLT 749
Query: 999 DLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAAREK 1058
LG KM + P++P LAK L+ + C +E+L+IV+MLSV ++F+RPKD+ +D + +
Sbjct: 750 TLGRKMADLPMEPALAKTLIQSVEYECTEEILSIVAMLSVQTIFYRPKDKQALADQRKSR 809
Query: 1059 FFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQLLDILKTLKIPLT 1118
F DHLTLL V+Q W + Y WC ++++ +S+R+A EVR QL I++
Sbjct: 810 FHHSLGDHLTLLNVFQSWCRNNYSKTWCRDNFIQERSMRRAMEVRKQLKSIMQRFGYKTM 869
Query: 1119 SSGHDFDVVRKAICSAYFHNAA-RLKGVGEYINCRNGMPCHLHPSSAIYGLGYTPEYVVY 1177
S G+D D VR+ CS YF N+A R +G G Y +LHPSS++YG P+YV+Y
Sbjct: 870 SCGNDVDRVRRTFCSGYFKNSAKRQEGEG-YKTLNENTLVYLHPSSSLYGK--KPQYVIY 926
Query: 1178 HELILTTKEYMQCATAVEPQWLSELGPMFFSVKDSDTSMLEHKKKQKESKTAMEEEMENL 1237
H L+LT+KEYM C + ++P WL EL P +F D+ T + E KKKQK ++ +N
Sbjct: 927 HTLLLTSKEYMHCVSIIDPNWLYELAPKYFRPADAKT-VQEIKKKQKIVPLFSRQKKDNW 985
Query: 1238 R 1238
R
Sbjct: 986 R 986
>SGD|S000000815 [details] [associations]
symbol:PRP22 "DEAH-box RNA-dependent ATPase/ATP-dependent RNA
helicase" species:4932 "Saccharomyces cerevisiae" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IMP] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000350 "generation of catalytic spliceosome for second
transesterification step" evidence=IDA;IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000386 "second spliceosomal transesterification
activity" evidence=IMP;IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000390 "spliceosomal complex disassembly"
evidence=IMP] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0071021 "U2-type post-spliceosomal complex"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 SGD:S000000815 GO:GO:0005524 KO:K01897
GO:GO:0003723 EMBL:BK006939 EMBL:U18778 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 HOGENOM:HOG000175261 GO:GO:0071007 InterPro:IPR022967
SMART:SM00316 GO:GO:0000390 GeneTree:ENSGT00700000104241 KO:K12818
GO:GO:0000350 RefSeq:NP_010931.3 GeneID:856734 KEGG:sce:YER015W
OrthoDB:EOG45TGW9 EMBL:X58681 PIR:S13643 RefSeq:NP_010929.3
ProteinModelPortal:P24384 SMR:P24384 DIP:DIP-655N IntAct:P24384
MINT:MINT-648209 STRING:P24384 PaxDb:P24384 EnsemblFungi:YER013W
GeneID:856732 KEGG:sce:YER013W CYGD:YER013w OMA:QITQYLD
NextBio:982846 Genevestigator:P24384 GermOnline:YER013W
GO:GO:0071021 Uniprot:P24384
Length = 1145
Score = 1673 (594.0 bits), Expect = 6.6e-175, Sum P(2) = 6.6e-175
Identities = 347/787 (44%), Positives = 507/787 (64%)
Query: 441 TELSTEFDDEEEHKVILLVHDTKPPFL-DGRIVFTKQAEPVMPIKDPTSDMAIISRKGSA 499
++L + DE + + L D P FL D ++ K+ E K P M + GS
Sbjct: 346 SKLEEQQRDETDEIDVELNTDDGPKFLKDQQVKGAKKYEMPKITKVPRGFMNRSAINGSN 405
Query: 500 LVREIREKQTQNKSRQRFWELAGSQMGNILGVKKTAEQVDADTAVVGEQGEIDFREDAKF 559
+R+ RE++ + K R+ ++ Q + T + D+ + + ++ E K
Sbjct: 406 AIRDHREEKLRKK-REIEQQIRKQQSFD----DPTKNKKDSRNEIQMLKNQLIVTEWEK- 459
Query: 560 SQHMKKGEAVSDFAKSKTL--AEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQ 617
+ E++S + K +L + QRQ LP++++R EL+Q +R+NQ GETGSGKTTQ
Sbjct: 460 ---NRMNESIS-YGKRTSLPISAQRQTLPVYAMRSELIQAVRDNQFLVIVGETGSGKTTQ 515
Query: 618 LTQYLLEDGYTTNGIVGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTL 677
+TQYL E+G++ G++GCTQPRRVAA+SVAKRV+EE+ ++G VGY IRFEDVTGP T
Sbjct: 516 ITQYLDEEGFSNYGMIGCTQPRRVAAVSVAKRVAEEVGCKVGHDVGYTIRFEDVTGPDTR 575
Query: 678 IKYMTDGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTS 737
IKYMTDG+L RE L D ++ KY VI++DEAHER+++TDVLF +LKK +R + K+IVTS
Sbjct: 576 IKYMTDGMLQREALLDPEMSKYSVIMLDEAHERTVATDVLFALLKKAAIKRPELKVIVTS 635
Query: 738 ATLNAQKFSDFFGSVPIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDIL 797
ATLN+ KFS++F + PI +IPG+TFPV LYS+TP DY+EAA+ + IHI PGDIL
Sbjct: 636 ATLNSAKFSEYFLNCPIINIPGKTFPVEVLYSQTPQMDYIEAALDCVIDIHINEGPGDIL 695
Query: 798 IFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTR 857
+F+TGQ+EI++ C L +R++ L S + ELLILP+YS LP+++Q+KIFE +G+R
Sbjct: 696 VFLTGQEEIDSCCEILYDRVKTLGDS----IGELLILPVYSALPSEIQSKIFEPTPKGSR 751
Query: 858 KCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXX 917
K + ATNIAETS+T+DGI+YV+D G+ K+ +YN + G++ L V P+S
Sbjct: 752 KVVFATNIAETSITIDGIYYVVDPGFAKINIYNARAGIEQLIVSPISQAQANQRKGRAGR 811
Query: 918 XXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQEN 977
CYRLYTESA+ NEML + VPEIQR NL + + FDFMDPPP+
Sbjct: 812 TGPGKCYRLYTESAFYNEMLENTVPEIQRQNLSHTILMLKAMGINDLLKFDFMDPPPKNL 871
Query: 978 ILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLS 1037
+LN++ +L+ L +L++ G LT+LG +M FP+DP L++ LL C DE++TI+SMLS
Sbjct: 872 MLNALTELYHLQSLDDEGKLTNLGKEMSLFPMDPTLSRSLLSSVDNQCSDEIVTIISMLS 931
Query: 1038 VPSVFFRPKDRAEESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLR 1097
V +VF+RPKDR E+D+ + KF DHLTLL VY +W++ Y +C+ ++LH + L+
Sbjct: 932 VQNVFYRPKDRQLEADSKKAKFHHPYGDHLTLLNVYTRWQQANYSEQYCKTNFLHFRHLK 991
Query: 1098 KAREVRSQLLDILKTLKIPLTSSGHDFDVVRKAICSAYFHNAARLKGVGEYINCRNGMPC 1157
+AR+V+SQ+ I K + + L S D D++RK S +F NAA+ Y G
Sbjct: 992 RARDVKSQISMIFKKIGLKLISCHSDPDLIRKTFVSGFFMNAAKRDSQVGYKTINGGTEV 1051
Query: 1158 HLHPSSAIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFFSVKDSDTSML 1217
+HPSS++YG Y EYV+YH ++LT++EYM T++EPQWL E+ P F+ D+++
Sbjct: 1052 GIHPSSSLYGKEY--EYVMYHSIVLTSREYMSQVTSIEPQWLLEVAPHFYKAGDAES--- 1106
Query: 1218 EHKKKQK 1224
+ +KK K
Sbjct: 1107 QSRKKAK 1113
Score = 48 (22.0 bits), Expect = 6.6e-175, Sum P(2) = 6.6e-175
Identities = 13/48 (27%), Positives = 23/48 (47%)
Query: 391 QKKEVELAKRLVRKDGSRMSLAQSKKLSQITADN-HQWEERQLLRSGA 437
+K+ E + R + + S K+ + + +WE RQL+ SGA
Sbjct: 260 RKRNTESVEDRGRSNDAHTSRNMKNKIKRRALTSPERWEIRQLIASGA 307
>ZFIN|ZDB-GENE-030131-8589 [details] [associations]
symbol:dhx16 "DEAH (Asp-Glu-Ala-His) box
polypeptide 16" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0035987
"endodermal cell differentiation" evidence=IMP] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-030131-8589 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 HOVERGEN:HBG039428 CTD:8449 OrthoDB:EOG4VHK5Q
GO:GO:0035987 EMBL:BC045393 IPI:IPI00495801 RefSeq:NP_956318.1
UniGene:Dr.76186 ProteinModelPortal:Q7ZVV8 STRING:Q7ZVV8
PRIDE:Q7ZVV8 GeneID:336645 KEGG:dre:336645 InParanoid:Q7ZVV8
NextBio:20811846 ArrayExpress:Q7ZVV8 Bgee:Q7ZVV8 Uniprot:Q7ZVV8
Length = 1054
Score = 1630 (578.8 bits), Expect = 9.8e-172, Sum P(2) = 9.8e-172
Identities = 380/932 (40%), Positives = 544/932 (58%)
Query: 322 LTFSRESSQSFEDGVADETYSEEHNYEITESMRLEMEYNSDRAWYDREEGTTMFDTDSSS 381
+TF E ++ G DE EE +E E RL+ D A+ +R + D D +
Sbjct: 147 ITFKDEPKKA---GKEDE---EEEEWERGERERLQDLEERD-AFAERVKQK---DKDKTR 196
Query: 382 FILGDDASYQKKEVELAKRL-VRKDGSRMSLAQSKKLSQITADNHQWEERQLLRSGAVRG 440
IL + + +K E KR+ + ++ R L + +K S+ + + +E+ ++
Sbjct: 197 NIL--ERNDKKAYEEAQKRIKMAEEDKRKMLPELRKQSRRQYLSKREQEKLEDLEAEIKD 254
Query: 441 TE--LSTEFDDEEEHKVILLVHDTKPPFLDGRIVFTKQAEP-----VMPIKDPTSDMAII 493
E ST+ + E K + + + + K+ E MP + I
Sbjct: 255 EEYLFSTQNLTDRERKDLEYKRTIRDMAKEYKKAGAKEQEERKNRYYMPEEKRNKS---I 311
Query: 494 SRKGSALVREIREKQTQNKSRQRFWELAGSQMGNI-LGVK-----KTAEQVDADTAVVGE 547
+K L E E + Q WE A + G + + E+ + ++ E
Sbjct: 312 PQKDMDL--EFEETPREGGGEQGRWEEARVATATLQFGARQERERRIKEEQERYQLILEE 369
Query: 548 QGEIDFREDA---KFSQHMKKGEA-VSDFAKSK-TLAEQRQYLPIFSVRDELLQVIRENQ 602
+ I F A K + K+ E +S K K ++ E R+ LPIF R++LL I ++Q
Sbjct: 370 EEMITFVSTAITMKGTLSEKESEPELSQAEKQKQSIQEVRRSLPIFPYREDLLAAIGDHQ 429
Query: 603 XXXXXGETGSGKTTQLTQYLLEDGYTTNGI-VGCTQPRRVAAMSVAKRVSEEMDTELGDK 661
GETGSGKTTQ+ QYLLE+GYT G+ +GCTQPRRVAAMSVA RV++EM +LG++
Sbjct: 430 ILVIEGETGSGKTTQIPQYLLEEGYTKGGMKIGCTQPRRVAAMSVAARVAQEMSVKLGNE 489
Query: 662 VGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLFGIL 721
VGY+IRFED T T++KYMTDG+LLRE L + DL Y VI++DEAHER+L TD+LFG++
Sbjct: 490 VGYSIRFEDCTSERTILKYMTDGMLLREFLTEPDLASYSVIIIDEAHERTLHTDILFGLI 549
Query: 722 KKVVARRRDFKLIVTSATLNAQKFSDFFGSVPIFHIPGRTFPVNTLYSKTPCEDYVEAAV 781
K + R D K++V SATL+ ++FS FF P+F IPGR FPV+ Y+K P DY+EA V
Sbjct: 550 KDIARFRPDLKVLVASATLDTERFSSFFDDAPVFRIPGRRFPVDIYYTKAPEADYLEACV 609
Query: 782 KQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLP 841
+ IH+T PGD+L+F+TGQ+EIEA C L+ER +L S ++ ELL+LPIY+ LP
Sbjct: 610 VSVLQIHVTQSPGDVLVFLTGQEEIEACCELLQERCRRLGS----KISELLVLPIYANLP 665
Query: 842 ADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVF 901
+D+QAKIF G RK +VATNIAETSLT+DGI YVID G+ K K YN K GM++L V
Sbjct: 666 SDMQAKIFNPTPPGARKVVVATNIAETSLTIDGIIYVIDPGFCKQKSYNAKTGMESLIVT 725
Query: 902 PVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXX 961
P S C+RLYT A+ +EM + VPEIQRTNLGNVV
Sbjct: 726 PCSRASANQRAGRAGRVAAGKCFRLYTAWAFKHEMEETTVPEIQRTNLGNVVLLLKSLGI 785
Query: 962 XXXXXFDFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGE 1021
FDFMDPPP E ++ ++ QL+ LGALN++G LT LG +M E P+DP L+KM+L E
Sbjct: 786 NDLIHFDFMDPPPHETLVLALEQLYALGALNHLGELTKLGRRMAELPVDPMLSKMILASE 845
Query: 1022 QLGCLDEVLTIVSMLSVP-SVFFRPKDRAEESDAAREKFFVQESDHLTLLYVYQQWKEHQ 1080
Q C +EVLTI +MLSV S+F+RPKD+ +D AR F V DHL LL VY QW E
Sbjct: 846 QYKCSEEVLTIAAMLSVNNSIFYRPKDKVVHADNARMNFVVPGGDHLVLLNVYTQWVESG 905
Query: 1081 YRGDWCEEHYLHVKSLRKAREVRSQLLDILKTLKIPLTSSGHDFDVVRKAICSAYFHNAA 1140
Y WC E+++ +S+++AR+VR QL ++ +++ L SS D +RKA+ + YF++ A
Sbjct: 906 YSTQWCFENFIQFRSMKRARDVRDQLEGLMDRIEVELCSSNGDSMPIRKAVTAGYFYHTA 965
Query: 1141 RLKGVGEYINCRNGMPCHLHPSSAIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLS 1200
RL G Y ++ ++HP+S+++ P +++YHEL+ TTKE+M+ +E WL
Sbjct: 966 RLSK-GGYKTVKHQQTVYVHPNSSLFE--EQPRWMIYHELVFTTKEFMRQVIEIESGWLL 1022
Query: 1201 ELGPMFFSVKDSDTSMLEHKKKQKESKTAMEE 1232
E+ P ++ K+ + S + K +K+ K A EE
Sbjct: 1023 EVAPHYYKNKELEDSSSK-KMPRKQGK-AREE 1052
Score = 61 (26.5 bits), Expect = 9.8e-172, Sum P(2) = 9.8e-172
Identities = 15/65 (23%), Positives = 27/65 (41%)
Query: 177 DDTRSESRGPSRRDNYDSKGRYRGREARDRDEPEYGGEYGRKRS-KYDGTRRTPGRSDWD 235
D + G ++ KG+ R + RDE E +K+S + + G+ D +
Sbjct: 103 DGEAAREGGKEKKSKERDKGKKRKHLRQKRDESPSSSEEDKKKSITFKDEPKKAGKEDEE 162
Query: 236 DGRWE 240
+ WE
Sbjct: 163 EEEWE 167
Score = 55 (24.4 bits), Expect = 4.2e-171, Sum P(2) = 4.2e-171
Identities = 18/58 (31%), Positives = 26/58 (44%)
Query: 167 DRGSERKYLKDDTRSESRGPSRRDNYDS-KGRYRGREARDRDEPEYGGEYGRKRSKYD 223
D+G +RK+L+ R ES S D S + ++A DE E E G + D
Sbjct: 120 DKGKKRKHLRQK-RDESPSSSEEDKKKSITFKDEPKKAGKEDEEEEEWERGERERLQD 176
>UNIPROTKB|O60231 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 EMBL:BA000025 GO:GO:0008380 GO:GO:0006397
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AL845353 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12813 GO:GO:0003724
HOVERGEN:HBG039428 OMA:GTLHREF EMBL:AB001601 EMBL:AB011149
EMBL:BC008825 EMBL:BC009392 IPI:IPI00552073 RefSeq:NP_001157711.1
RefSeq:NP_003578.2 UniGene:Hs.485060 ProteinModelPortal:O60231
SMR:O60231 IntAct:O60231 MINT:MINT-5003862 STRING:O60231
PhosphoSite:O60231 PaxDb:O60231 PRIDE:O60231 DNASU:8449
Ensembl:ENST00000376442 Ensembl:ENST00000383577
Ensembl:ENST00000417308 Ensembl:ENST00000421095
Ensembl:ENST00000424672 Ensembl:ENST00000451456
Ensembl:ENST00000458094 GeneID:8449 KEGG:hsa:8449 UCSC:uc003nqz.3
CTD:8449 GeneCards:GC06M030620 HGNC:HGNC:2739 HPA:HPA051455
MIM:603405 neXtProt:NX_O60231 PharmGKB:PA27205 InParanoid:O60231
OrthoDB:EOG4VHK5Q PhylomeDB:O60231 GenomeRNAi:8449 NextBio:31614
ArrayExpress:O60231 Bgee:O60231 CleanEx:HS_DHX16
Genevestigator:O60231 GermOnline:ENSG00000204560 Uniprot:O60231
Length = 1041
Score = 1623 (576.4 bits), Expect = 2.6e-171, Sum P(2) = 2.6e-171
Identities = 330/736 (44%), Positives = 462/736 (62%)
Query: 504 IREKQTQNKSRQRFWELAGSQMGNI-LGVKKTAEQVDADTAVVGEQGEIDF-REDAKFSQ 561
+ E+ QR WE A ++ G + A Q V+ E+ I+F R
Sbjct: 315 VEEESGAPGEEQRRWEEARLGAASLKFGARDAASQEPKYQLVLEEEETIEFVRATQLQGD 374
Query: 562 HMKKGEAVSDFAKSK-TLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQ 620
S A+ K ++ R+ LP+F R+ELL I +Q GETGSGKTTQ+ Q
Sbjct: 375 EEPSAPPTSTQAQQKESIQAVRRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQ 434
Query: 621 YLLEDGYTTNGI-VGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIK 679
YL E+GYT G+ + CTQPRRVAAMSVA RV+ EM +LG++VGY+IRFED T T+++
Sbjct: 435 YLFEEGYTNKGMKIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLR 494
Query: 680 YMTDGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSAT 739
YMTDG+LLRE L + DL Y V+++DEAHER+L TD+LFG++K V R + K++V SAT
Sbjct: 495 YMTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASAT 554
Query: 740 LNAQKFSDFFGSVPIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIF 799
++ +FS FF P+F IPGR FPV+ Y+K P DY+EA V + IH+T PPGDIL+F
Sbjct: 555 MDTARFSTFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVF 614
Query: 800 MTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKC 859
+TGQ+EIEAAC L++R +L S ++ ELL+LPIY+ LP+D+QA+IF+ G RK
Sbjct: 615 LTGQEEIEAACEMLQDRCRRLGS----KIRELLVLPIYANLPSDMQARIFQPTPPGARKV 670
Query: 860 IVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXX 919
+VATNIAETSLT++GI YV+D G+ K K YNP+ GM++L V P S
Sbjct: 671 VVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVA 730
Query: 920 XXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENIL 979
C+RLYT AY +E+ + VPEIQRT+LGNVV FDF+DPPP E +L
Sbjct: 731 AGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLL 790
Query: 980 NSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVP 1039
++ QL+ LGALN++G LT G KM E P+DP L+KM+L E+ C +E+LT+ +MLSV
Sbjct: 791 LALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVN 850
Query: 1040 -SVFFRPKDRAEESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRK 1098
S+F+RPKD+ +D AR FF+ DHL LL VY QW E Y WC E+++ +S+R+
Sbjct: 851 NSIFYRPKDKVVHADNARVNFFLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRR 910
Query: 1099 AREVRSQLLDILKTLKIPLTSSGHDFDVVRKAICSAYFHNAARLKGVGEYINCRNGMPCH 1158
AR+VR QL +L+ +++ L+S D+ VRKAI + YF++ ARL G Y +
Sbjct: 911 ARDVREQLEGLLERVEVGLSSCQGDYIRVRKAITAGYFYHTARLTRSG-YRTVKQQQTVF 969
Query: 1159 LHPSSAIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFFSVKDSDTSMLE 1218
+HP+S+++ P +++YHEL+LTTKE+M+ +E WL E+ P ++ K+ +
Sbjct: 970 IHPNSSLFE--QQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYYKAKELEDP--- 1024
Query: 1219 HKKKQKESKTAMEEEM 1234
H KK + EE+
Sbjct: 1025 HAKKMPKKIGKTREEL 1040
Score = 64 (27.6 bits), Expect = 2.6e-171, Sum P(2) = 2.6e-171
Identities = 21/83 (25%), Positives = 39/83 (46%)
Query: 167 DRGSERKYLKDDTRSESRGPSRRDNYDSKGRYRG---REARDRDEPEYGGEYGRKRSKYD 223
++ + L+D S SR + K R + R+ R+ +E E E G+K++
Sbjct: 92 EKNRSYRLLEDSEESSEETVSRAGSSLQKKRKKRKHLRKKREEEEEEEASEKGKKKT--G 149
Query: 224 GTRRTPGRSDWDDGRWEWEDTPR 246
G+++ + + +D EWE T R
Sbjct: 150 GSKQQTEKPESED---EWERTER 169
Score = 55 (24.4 bits), Expect = 2.3e-170, Sum P(2) = 2.3e-170
Identities = 19/71 (26%), Positives = 33/71 (46%)
Query: 164 DRDDRGSER-KYLKDDTRSESRGPSRRDNYDSKGRYRGREARDRDEPEYGGEYGRKRSKY 222
+ ++ SE+ K ++ ++ P D ++ R R ++ +RD E R+R K
Sbjct: 135 EEEEEASEKGKKKTGGSKQQTEKPESEDEWERTERERLQDLEERDA---FAERVRQRDK- 190
Query: 223 DGTRRTPGRSD 233
D TR RSD
Sbjct: 191 DRTRNVLERSD 201
Score = 46 (21.3 bits), Expect = 2.1e-169, Sum P(2) = 2.1e-169
Identities = 13/51 (25%), Positives = 28/51 (54%)
Query: 493 ISRKGSALVREIREKQTQNKSRQRFWELAGSQMGNIL--GVKKTAEQVDAD 541
+SR GS+L ++ ++++ K R+ E S+ G G K+ E+ +++
Sbjct: 111 VSRAGSSLQKKRKKRKHLRKKREEEEEEEASEKGKKKTGGSKQQTEKPESE 161
>GENEDB_PFALCIPARUM|PF10_0294 [details] [associations]
symbol:PF10_0294 "RNA helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0008380 "RNA splicing"
evidence=ISS] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008380 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:AE014185 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
HSSP:P05055 RefSeq:XP_001347578.1 ProteinModelPortal:Q8IJA4
IntAct:Q8IJA4 MINT:MINT-1724156 EnsemblProtists:PF10_0294:mRNA
GeneID:810451 KEGG:pfa:PF10_0294 EuPathDB:PlasmoDB:PF3D7_1030100
OMA:HRHSKEH ProtClustDB:CLSZ2433181 Uniprot:Q8IJA4
Length = 1290
Score = 1641 (582.7 bits), Expect = 5.4e-171, Sum P(2) = 5.4e-171
Identities = 368/895 (41%), Positives = 534/895 (59%)
Query: 367 DREEGTTMFDTDSS----SFI-LGDDASYQKKEVELAKRLVRKDGSRMSLAQSKKLSQIT 421
D++ G + + D + ++I L DD + +++ V KD + +L + + + +I
Sbjct: 404 DQKTGKNLVNDDMNKEEDNYISLFDDINEDFNDLKKKNANVFKDDPKETL-KYESVIKIQ 462
Query: 422 ADNHQWEERQLLRSGAVRGTELSTEF-----DD--EEEHKVILL-VHDTKPPFLDGRIVF 473
+D +WE +QL++SG V + E+ D+ E+E +I + V++ +P FL G+
Sbjct: 463 SDYSKWEIQQLIKSGVVFDENIRNEYKNLKIDEKIEDEEDIIEIEVNEKEPAFLKGQTTK 522
Query: 474 T-KQAEPVMPIKDPTSDMAIISRKGSALVREIRE-KQT-QN-------KSRQRFWELAGS 523
+ P+ I + +A SAL +E +E KQ QN K R WE
Sbjct: 523 AGAKLSPIQIIVNAEGSLAKAITTTSALAKERKEQKQNEQNAIYDNIPKDISRPWE---D 579
Query: 524 QMGNILGVKKTAEQVDADTAVVGEQGEIDFREDAKFSQHMKKGEAVSDFAKSKTLAEQRQ 583
N LG + AE + +G+ +I ++ ++ + + EQR
Sbjct: 580 PKPN-LGERTIAEALKN----IGKNYDIP-----EWKKNYNNNNISVGVKNTLPINEQRS 629
Query: 584 YLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNGIVGCTQPRRVAA 643
LPI++++++L++ I +N GETGSGKTTQ+ QYL E YT GIVGCTQPRRVAA
Sbjct: 630 KLPIYNLKNDLMKAIEKNNVLIVIGETGSGKTTQIPQYLHEANYTEKGIVGCTQPRRVAA 689
Query: 644 MSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDSDLDKYRVIV 703
MS+AKRVSEE LG +VGY+IRF+D T T+IKY+TDG+LLRETL D+ L KY I+
Sbjct: 690 MSIAKRVSEEFGCILGQEVGYSIRFDDCTSNDTIIKYLTDGMLLRETLSDTLLTKYSFII 749
Query: 704 MDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPIFHIPGRTFP 763
+DEAHER++STD+LF +LK VV +R DFKLIVTSATL+A+KFS +F + PIF IPG+ FP
Sbjct: 750 LDEAHERTISTDILFCLLKDVVRKRADFKLIVTSATLDAEKFSTYFFNSPIFTIPGKIFP 809
Query: 764 VNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQLISS 823
V L+SK P DYVEA++ + IH+ PGDIL+F+TGQDEI AC L ERM++L S
Sbjct: 810 VEILHSKEPESDYVEASLITVLNIHLNEHPGDILVFLTGQDEINTACEILHERMKKLESM 869
Query: 824 TTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGY 883
+ P L+ILPIYS LP+++Q+ IFE A G RKCI+ATNIAE SLT+DGIF+VID G+
Sbjct: 870 SP---PPLIILPIYSSLPSEMQSVIFEPAPPGCRKCILATNIAEASLTIDGIFFVIDPGF 926
Query: 884 GKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPE 943
K+K Y+ K MD+L V P+S CYRLYTE AY NEM VPE
Sbjct: 927 CKIKKYDSKRDMDSLIVAPISKANAKQRAGRAGRTGPGKCYRLYTEEAYKNEMSEMSVPE 986
Query: 944 IQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWK 1003
IQR NLG++V FDFMD P E +++S+ L+ LGAL++ G LT LG K
Sbjct: 987 IQRINLGSIVLLLKALGINDFLHFDFMDSPSVETLIHSLENLYYLGALDDNGYLTKLGKK 1046
Query: 1004 MVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAAREKFFVQE 1063
M FP++P L+K+LL C D+V+TIVSMLSV ++F+RP+++A +D + KF + +
Sbjct: 1047 MANFPMEPNLSKILLTSLNFNCTDDVVTIVSMLSVQNIFYRPQNKALLADKKKNKFIMPQ 1106
Query: 1064 SDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQLLDILKTLKIPLTSSGHD 1123
D +T L +Y +WKE+ + WC E+++ ++L++A++VR Q+L I + + S
Sbjct: 1107 GDLITYLNIYNKWKENSFSNYWCHENFIQSRALKRAQDVRKQMLSIFEKYNYQVKKSTSK 1166
Query: 1124 FDVVR-----KAICSAYFHNAARLKGVGEYINCRNGMPCHLHPSSAIYGLGYTPEYVVYH 1178
D + K+ICS YF++ + Y +HPSS ++ P +VVYH
Sbjct: 1167 NDATKYVNICKSICSGYFNHVCKRDTQQGYTTLLTNQQVFIHPSSTLFNKN--PLFVVYH 1224
Query: 1179 ELILTTKEYMQCATAVEPQWLSELGP-MFFSVKDSDTSMLEHKKKQKESKTAMEE 1232
EL+LT KEY++ T ++PQWL +L P +F + S ++ ++K + EE
Sbjct: 1225 ELVLTNKEYIRDCTIIQPQWLIQLAPNLFIPADEKKISKIKLREKIEPLHNYYEE 1279
Score = 43 (20.2 bits), Expect = 5.4e-171, Sum P(2) = 5.4e-171
Identities = 11/53 (20%), Positives = 25/53 (47%)
Query: 338 DETYSEEHNYEITESMRLEMEYNSDRAWYDREEGTTMFDTDSSSFILGDDASY 390
D +S++H++ R + +SD ++Y+ ++ D + +D SY
Sbjct: 271 DHHHSKDHHHSNKHHHRRHISSSSDSSYYNNKKKKEKTHRDKKN---EEDKSY 320
>UNIPROTKB|Q8IJA4 [details] [associations]
symbol:PF10_0294 "RNA helicase, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008380 "RNA splicing" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008380 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:AE014185 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
HSSP:P05055 RefSeq:XP_001347578.1 ProteinModelPortal:Q8IJA4
IntAct:Q8IJA4 MINT:MINT-1724156 EnsemblProtists:PF10_0294:mRNA
GeneID:810451 KEGG:pfa:PF10_0294 EuPathDB:PlasmoDB:PF3D7_1030100
OMA:HRHSKEH ProtClustDB:CLSZ2433181 Uniprot:Q8IJA4
Length = 1290
Score = 1641 (582.7 bits), Expect = 5.4e-171, Sum P(2) = 5.4e-171
Identities = 368/895 (41%), Positives = 534/895 (59%)
Query: 367 DREEGTTMFDTDSS----SFI-LGDDASYQKKEVELAKRLVRKDGSRMSLAQSKKLSQIT 421
D++ G + + D + ++I L DD + +++ V KD + +L + + + +I
Sbjct: 404 DQKTGKNLVNDDMNKEEDNYISLFDDINEDFNDLKKKNANVFKDDPKETL-KYESVIKIQ 462
Query: 422 ADNHQWEERQLLRSGAVRGTELSTEF-----DD--EEEHKVILL-VHDTKPPFLDGRIVF 473
+D +WE +QL++SG V + E+ D+ E+E +I + V++ +P FL G+
Sbjct: 463 SDYSKWEIQQLIKSGVVFDENIRNEYKNLKIDEKIEDEEDIIEIEVNEKEPAFLKGQTTK 522
Query: 474 T-KQAEPVMPIKDPTSDMAIISRKGSALVREIRE-KQT-QN-------KSRQRFWELAGS 523
+ P+ I + +A SAL +E +E KQ QN K R WE
Sbjct: 523 AGAKLSPIQIIVNAEGSLAKAITTTSALAKERKEQKQNEQNAIYDNIPKDISRPWE---D 579
Query: 524 QMGNILGVKKTAEQVDADTAVVGEQGEIDFREDAKFSQHMKKGEAVSDFAKSKTLAEQRQ 583
N LG + AE + +G+ +I ++ ++ + + EQR
Sbjct: 580 PKPN-LGERTIAEALKN----IGKNYDIP-----EWKKNYNNNNISVGVKNTLPINEQRS 629
Query: 584 YLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNGIVGCTQPRRVAA 643
LPI++++++L++ I +N GETGSGKTTQ+ QYL E YT GIVGCTQPRRVAA
Sbjct: 630 KLPIYNLKNDLMKAIEKNNVLIVIGETGSGKTTQIPQYLHEANYTEKGIVGCTQPRRVAA 689
Query: 644 MSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDSDLDKYRVIV 703
MS+AKRVSEE LG +VGY+IRF+D T T+IKY+TDG+LLRETL D+ L KY I+
Sbjct: 690 MSIAKRVSEEFGCILGQEVGYSIRFDDCTSNDTIIKYLTDGMLLRETLSDTLLTKYSFII 749
Query: 704 MDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPIFHIPGRTFP 763
+DEAHER++STD+LF +LK VV +R DFKLIVTSATL+A+KFS +F + PIF IPG+ FP
Sbjct: 750 LDEAHERTISTDILFCLLKDVVRKRADFKLIVTSATLDAEKFSTYFFNSPIFTIPGKIFP 809
Query: 764 VNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQLISS 823
V L+SK P DYVEA++ + IH+ PGDIL+F+TGQDEI AC L ERM++L S
Sbjct: 810 VEILHSKEPESDYVEASLITVLNIHLNEHPGDILVFLTGQDEINTACEILHERMKKLESM 869
Query: 824 TTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGY 883
+ P L+ILPIYS LP+++Q+ IFE A G RKCI+ATNIAE SLT+DGIF+VID G+
Sbjct: 870 SP---PPLIILPIYSSLPSEMQSVIFEPAPPGCRKCILATNIAEASLTIDGIFFVIDPGF 926
Query: 884 GKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPE 943
K+K Y+ K MD+L V P+S CYRLYTE AY NEM VPE
Sbjct: 927 CKIKKYDSKRDMDSLIVAPISKANAKQRAGRAGRTGPGKCYRLYTEEAYKNEMSEMSVPE 986
Query: 944 IQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWK 1003
IQR NLG++V FDFMD P E +++S+ L+ LGAL++ G LT LG K
Sbjct: 987 IQRINLGSIVLLLKALGINDFLHFDFMDSPSVETLIHSLENLYYLGALDDNGYLTKLGKK 1046
Query: 1004 MVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAAREKFFVQE 1063
M FP++P L+K+LL C D+V+TIVSMLSV ++F+RP+++A +D + KF + +
Sbjct: 1047 MANFPMEPNLSKILLTSLNFNCTDDVVTIVSMLSVQNIFYRPQNKALLADKKKNKFIMPQ 1106
Query: 1064 SDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQLLDILKTLKIPLTSSGHD 1123
D +T L +Y +WKE+ + WC E+++ ++L++A++VR Q+L I + + S
Sbjct: 1107 GDLITYLNIYNKWKENSFSNYWCHENFIQSRALKRAQDVRKQMLSIFEKYNYQVKKSTSK 1166
Query: 1124 FDVVR-----KAICSAYFHNAARLKGVGEYINCRNGMPCHLHPSSAIYGLGYTPEYVVYH 1178
D + K+ICS YF++ + Y +HPSS ++ P +VVYH
Sbjct: 1167 NDATKYVNICKSICSGYFNHVCKRDTQQGYTTLLTNQQVFIHPSSTLFNKN--PLFVVYH 1224
Query: 1179 ELILTTKEYMQCATAVEPQWLSELGP-MFFSVKDSDTSMLEHKKKQKESKTAMEE 1232
EL+LT KEY++ T ++PQWL +L P +F + S ++ ++K + EE
Sbjct: 1225 ELVLTNKEYIRDCTIIQPQWLIQLAPNLFIPADEKKISKIKLREKIEPLHNYYEE 1279
Score = 43 (20.2 bits), Expect = 5.4e-171, Sum P(2) = 5.4e-171
Identities = 11/53 (20%), Positives = 25/53 (47%)
Query: 338 DETYSEEHNYEITESMRLEMEYNSDRAWYDREEGTTMFDTDSSSFILGDDASY 390
D +S++H++ R + +SD ++Y+ ++ D + +D SY
Sbjct: 271 DHHHSKDHHHSNKHHHRRHISSSSDSSYYNNKKKKEKTHRDKKN---EEDKSY 320
>ASPGD|ASPL0000006947 [details] [associations]
symbol:AN5827 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:BN001301 EMBL:AACD01000100 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K12813
OMA:RIDDHRD OrthoDB:EOG4SBJ63 RefSeq:XP_663431.1
ProteinModelPortal:Q5B0V3 EnsemblFungi:CADANIAT00007219
GeneID:2871194 KEGG:ani:AN5827.2 Uniprot:Q5B0V3
Length = 1128
Score = 1560 (554.2 bits), Expect = 8.3e-171, Sum P(3) = 8.3e-171
Identities = 336/765 (43%), Positives = 485/765 (63%)
Query: 480 VMPIKDPTSDMAIISRKGS--ALVREI--REKQTQNK--SRQRFWELAGSQMGNILGVKK 533
+MP +D ++ I RK AL + R++ Q K + WE+ Q
Sbjct: 362 MMP-EDYITEKGKIDRKKKEDALYKRYVERDELGQEKFITEHEEWEM--EQTAKAKAQIN 418
Query: 534 TAEQVD-ADTAVVGEQGE-IDFREDAKF-------SQHMKKGEAVSDFA--KSKTLAEQR 582
AE VD D V + + I+F DA+ +Q + + D A K++T+ + R
Sbjct: 419 RAEFVDEGDYEYVFDDTQRINFTMDAQMKGTRKLMTQEQRMLQEKLDQAEQKAQTIEDTR 478
Query: 583 QYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNGI-VGCTQPRRV 641
+ LPI+ RD+++Q + ++Q GETGSGKTTQL QYL E GYT NG+ VGCTQPRRV
Sbjct: 479 KKLPIYQFRDQIIQAVHDHQVLIIVGETGSGKTTQLPQYLHEAGYTKNGMKVGCTQPRRV 538
Query: 642 AAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDSDLDKYRV 701
AAMSVA RV+EEM +LG++VGY+IRFED T T++KYMTDG+LLRE L + DL +Y
Sbjct: 539 AAMSVAARVAEEMGVKLGNEVGYSIRFEDNTSDKTVLKYMTDGMLLRELLTEPDLGQYSA 598
Query: 702 IVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPIFHIPGRT 761
+++DEAHER++ TD+ G+LK + R D KL+++SAT++AQKF +F + PIF+IPGR
Sbjct: 599 LMIDEAHERTVPTDIACGLLKDIAKARPDLKLLISSATMDAQKFQSYFDNAPIFNIPGRM 658
Query: 762 FPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQLI 821
+ V+ Y++ P +Y+ AA+ IH++ PGDIL+F+TGQ+EIEAA +L+E +L
Sbjct: 659 YNVDIHYTQQPEANYLAAAITTVFQIHVSQGPGDILVFLTGQEEIEAAEQSLQETARKL- 717
Query: 822 SSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDT 881
++PE++I PIY+ LP+DLQAKIFE RK ++ATNIAETSLT+DGI YVID
Sbjct: 718 ---GNKIPEMIICPIYANLPSDLQAKIFEPTPPKARKVVLATNIAETSLTIDGIVYVIDP 774
Query: 882 GYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPV 941
G+ K V+NP+ GM++L V P S C+RLYT+ AY NE+ S
Sbjct: 775 GFVKENVFNPRTGMESLVVTPCSRASANQRAGRAGRVGPGKCFRLYTKWAYYNELEESTT 834
Query: 942 PEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNVGALTDLG 1001
PEIQRTNL +V+ FDFMDPPP E I+ ++ QL+ LGALN+ G LT +G
Sbjct: 835 PEIQRTNLSSVILMLKSLGIDQLLEFDFMDPPPAETIIRALEQLYALGALNDRGELTKIG 894
Query: 1002 WKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPS-VFFRPKDRAEESDAAREKFF 1060
+M EFP DP LAK +L ++ GC++EVL+IVSML S +FFRPKD+ +D+AR +F
Sbjct: 895 RQMAEFPTDPMLAKAILAADKHGCVEEVLSIVSMLGEASALFFRPKDKKIHADSARNRFT 954
Query: 1061 VQES-DHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQLLDILKTLKIPLTS 1119
V++ DHLTLL ++ QW + + W +E++L +SL +AR+VR QL + +++ ++S
Sbjct: 955 VKDGGDHLTLLNIWNQWVDSDFSYVWAKENFLQQRSLTRARDVRDQLAKLCDRVEVTVSS 1014
Query: 1120 SGHDFDV-VRKAICSAYFHNAARLKGVGE-YINCRNGMPCHLHPSSAIYGLGYTPEYVVY 1177
G + V ++KAI + +F NAARL+ G+ Y + G +LHPSS ++ + P +V+Y
Sbjct: 1015 CGSNNIVPIQKAITAGFFPNAARLQRGGDSYRTIKTGQTVYLHPSSTLFEVN--PRWVIY 1072
Query: 1178 HELILTTKEYMQCATAVEPQWLSELGPMFFSVKDSDTSMLEHKKK 1222
EL+LT+KEYM+ ++ +WL E+ P ++ KD +T E K K
Sbjct: 1073 FELVLTSKEYMRSNMPLQAEWLVEVAPHYYKKKDLETLGTEKKPK 1117
Score = 77 (32.2 bits), Expect = 8.3e-171, Sum P(3) = 8.3e-171
Identities = 41/174 (23%), Positives = 69/174 (39%)
Query: 84 KSESSGIDEVVSNATN--GKRSHASRRYRETSARDITDAENPMAVGRAGETAGTHRSNEH 141
KSE+S I + + N GK A ++ D+ + + V G + G RS E
Sbjct: 67 KSETSAITNAGTGSGNRDGKTVAAGTEKKKYRLLDMDEVDYE-GVSGTGSSLGP-RSVET 124
Query: 142 AYVEXXXXXXXXXXXXXXXXR-H-DRDDRGSERKYLKDDTRSESRGPS--RRDNYDSKGR 197
+ + H DR D+ RK ++++R R RRD D + R
Sbjct: 125 ERKDRGRRAHDKSRDGDGNSKSHSDRWDKNENRKRERENSRDRRRSKKLRRRDVDDFEDR 184
Query: 198 YRGREARDRDEPEYGGEYGR---KRSKYDGTRRTPGRSDWDDGRWEWEDTPRRE 248
+ E + +E + GE+ KR++ + +P RS + E+ RE
Sbjct: 185 WGDEEILEEEEQDVEGEFAESPSKRARLEDGSASP-RSRASSADLDPEERKERE 237
Score = 61 (26.5 bits), Expect = 8.3e-171, Sum P(3) = 8.3e-171
Identities = 27/124 (21%), Positives = 54/124 (43%)
Query: 336 VADETYSEEHNYEITESMRLEMEYNSDRAWYDREEGTTMFDTDSSSFILGDDASYQKKEV 395
VA+ET N +T R + E+ +R E D +++ +D +K ++
Sbjct: 317 VAEETQELRENPNLTR--REKEEFARNREVLRIAEERLRIDDHRDGYMMPEDYITEKGKI 374
Query: 396 ELAKR---LVRKDGSRMSLAQSKKLSQITADNHQWEERQLLRSGAVRGTELSTEFDDEEE 452
+ K+ L ++ R L Q K +++ + +WE Q ++ A EF DE +
Sbjct: 375 DRKKKEDALYKRYVERDELGQEKFITE----HEEWEMEQTAKAKAQINR---AEFVDEGD 427
Query: 453 HKVI 456
++ +
Sbjct: 428 YEYV 431
Score = 60 (26.2 bits), Expect = 5.1e-169, Sum P(3) = 5.1e-169
Identities = 48/212 (22%), Positives = 76/212 (35%)
Query: 74 SVAASIDEEEKSESSGIDEVVSNATNGKRSHASRRYRETSARDI-TDAENPMAVGRAGET 132
+VAA E++K +DEV +G S R ET +D A + G
Sbjct: 87 TVAAGT-EKKKYRLLDMDEVDYEGVSGTGSSLGPRSVETERKDRGRRAHDKSRDGDGNSK 145
Query: 133 AGTHRSNEHAYVEXXXXXXXXXXXXXXXXRHDRDD---RGSERKYLKD---DTRSE-SRG 185
+ + R +++ + R D DD R + + L++ D E +
Sbjct: 146 SHSDRWDKNENRKRERENSRDRRRSKKLRRRDVDDFEDRWGDEEILEEEEQDVEGEFAES 205
Query: 186 PSRRDNY-DSKGRYRGREARDRDEPEYGGEYGRKRSKYDGTRRTPGRSDWDDGRWEWEDT 244
PS+R D R R + +PE E RKR + + DD R +
Sbjct: 206 PSKRARLEDGSASPRSRASSADLDPEERKERERKRDLEERDALAKRLASKDDKRSKKIVE 265
Query: 245 PRREGYSNSSKRYQPSPSPMFVGASPDARLVS 276
R + + +R + A PD RL S
Sbjct: 266 DRTKDSEAARRRALADDAKARDAAMPDLRLRS 297
Score = 55 (24.4 bits), Expect = 5.2e-167, Sum P(3) = 5.2e-167
Identities = 33/119 (27%), Positives = 49/119 (41%)
Query: 326 RESSQSFEDGVADETYSEEHNYEITESMRLEMEYNSDRAWYDREEGTTMFDTDSSSFILG 385
R FED DE EE ++ E S RA E+G+ + +SS L
Sbjct: 175 RRDVDDFEDRWGDEEILEEEEQDVEGEFA---ESPSKRARL--EDGSASPRSRASSADLD 229
Query: 386 DDASYQ---KKEVE----LAKRLVRKDGSRMSLAQSKKLSQITADNHQWEERQLLRSGA 437
+ + K+++E LAKRL KD R SKK+ + + + R+ L A
Sbjct: 230 PEERKERERKRDLEERDALAKRLASKDDKR-----SKKIVEDRTKDSEAARRRALADDA 283
Score = 50 (22.7 bits), Expect = 5.8e-168, Sum P(3) = 5.8e-168
Identities = 9/26 (34%), Positives = 17/26 (65%)
Query: 61 SQIDDGFKVPRVASVAASIDEEEKSE 86
++++DG PR + +A +D EE+ E
Sbjct: 210 ARLEDGSASPRSRASSADLDPEERKE 235
Score = 47 (21.6 bits), Expect = 1.2e-167, Sum P(3) = 1.2e-167
Identities = 21/75 (28%), Positives = 31/75 (41%)
Query: 48 SGLGVRAVEKGGGSQIDDGFKVPRVASVAASIDEEEKSESSGIDEVVSNATNGKRSHASR 107
S LG R+VE + D G R + D KS S D+ + + S R
Sbjct: 115 SSLGPRSVET---ERKDRG---RRAHDKSRDGDGNSKSHSDRWDKNENRKRERENSRDRR 168
Query: 108 RYRETSARDITDAEN 122
R ++ RD+ D E+
Sbjct: 169 RSKKLRRRDVDDFED 183
>RGD|1302963 [details] [associations]
symbol:Dhx16 "DEAH (Asp-Glu-Ala-His) box polypeptide 16"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1302963 GO:GO:0005524 GO:GO:0003676 EMBL:BX883048
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12813
HOVERGEN:HBG039428 CTD:8449 EMBL:CH474118 IPI:IPI00421973
RefSeq:NP_997661.1 UniGene:Rn.6832 GeneID:294232 KEGG:rno:294232
UCSC:RGD:1302963 NextBio:637799 Genevestigator:Q6MG13
Uniprot:Q6MG13
Length = 1044
Score = 1640 (582.4 bits), Expect = 1.1e-170, Sum P(2) = 1.1e-170
Identities = 334/737 (45%), Positives = 465/737 (63%)
Query: 504 IREKQTQNKSRQRFWELAGSQMGNI-LGVKKTAEQVDADTAVVGEQGEIDFREDAKFS-- 560
+ E+ QR WE A ++ G + A Q V+ E I+F A+
Sbjct: 317 VEEESGAPGEEQRRWEEARLDAASLKFGARDAAAQEPQYQLVLEEDETIEFVRAAQLQGD 376
Query: 561 QHMKKGEAVSDFAKSK-TLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLT 619
+ G +S A+ K ++ R+ LP+F R+ELL I +Q GETGSGKTTQ+
Sbjct: 377 EEPSSGPPLSAQAQQKESIQAVRRSLPVFPFREELLTAIANHQVLIIEGETGSGKTTQIP 436
Query: 620 QYLLEDGYTTNGI-VGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLI 678
QYL E+GYT G+ + CTQPRRVAAMSVA RV+ EM +LG++VGY+IRFED T T++
Sbjct: 437 QYLFEEGYTKKGMKIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVL 496
Query: 679 KYMTDGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSA 738
+YMTDG+LLRE L + DL Y V+++DEAHER+L TD+LFG++K V R + K++V SA
Sbjct: 497 RYMTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASA 556
Query: 739 TLNAQKFSDFFGSVPIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILI 798
TL+ +FS FF P+F IPGR FPV+ Y+K P DY+EA V + IH+T PPGDIL+
Sbjct: 557 TLDTARFSAFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILV 616
Query: 799 FMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRK 858
F+TGQ+EIEAAC L++R +L S ++ ELL+LPIY+ LP+D+QA+IF+ G RK
Sbjct: 617 FLTGQEEIEAACEMLQDRCRRLGS----KIRELLVLPIYANLPSDMQARIFQPTPPGARK 672
Query: 859 CIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXX 918
+VATNIAETSLT++GI YV+D G+ K K YNP+ GM++L V P S
Sbjct: 673 VVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRV 732
Query: 919 XXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENI 978
C+RLYT AY +E+ + VPEIQRT+LGNVV FDF+DPPP E +
Sbjct: 733 AAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETL 792
Query: 979 LNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSV 1038
L ++ QL+ LGALN++G LT G KM E P+DP L+KM+L E+ C +E+LT+ +MLSV
Sbjct: 793 LLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSV 852
Query: 1039 P-SVFFRPKDRAEESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLR 1097
S+F+RPKD+ +D AR FF+ DHL LL VY QW E Y WC E+++ +S+R
Sbjct: 853 NNSIFYRPKDKVVHADNARVNFFLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMR 912
Query: 1098 KAREVRSQLLDILKTLKIPLTSSGHDFDVVRKAICSAYFHNAARLKGVGEYINCRNGMPC 1157
+AR+VR QL +L+ +++ LTS D+ VRKAI S YF++ ARL G Y +
Sbjct: 913 RARDVREQLEGLLERVEVGLTSCQGDYVRVRKAITSGYFYHTARLTRSG-YRTVKQQQTV 971
Query: 1158 HLHPSSAIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFFSVKDSDTSML 1217
+HP+S+++ P +++YHEL+LTTKE+M+ +E WL E+ P ++ K+ +
Sbjct: 972 FIHPNSSLFE--QQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYYKAKELEDP-- 1027
Query: 1218 EHKKKQKESKTAMEEEM 1234
H KK + EE+
Sbjct: 1028 -HAKKMPKKVGKTREEL 1043
Score = 41 (19.5 bits), Expect = 1.1e-170, Sum P(2) = 1.1e-170
Identities = 18/103 (17%), Positives = 44/103 (42%)
Query: 483 IKDPTSDMAIISRKGSALVREIREKQTQNKSRQRFWELAGSQMGNILGVKKTAEQVDADT 542
++D S ++R GS+L ++ + ++ K +Q E + + G +KT
Sbjct: 100 LEDSESGEEAVARDGSSLQKKRKRRKHLRKKQQE--EEEEEEEASESGKRKTGGSKSPTE 157
Query: 543 AVVGEQGEIDFREDAKFSQHMKKGEAVSDFAKSKTLAEQRQYL 585
+ E + R + + Q +++ +A ++ + + R L
Sbjct: 158 EKPASEDEWE-RTERERLQDLEERDAFAERVRQRDKDRTRNVL 199
>UNIPROTKB|F1PGL2 [details] [associations]
symbol:DHX16 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12813
GeneTree:ENSGT00700000104241 OMA:GTLHREF CTD:8449 EMBL:AAEX03008197
RefSeq:XP_538827.2 Ensembl:ENSCAFT00000000685 GeneID:481706
KEGG:cfa:481706 Uniprot:F1PGL2
Length = 1042
Score = 1628 (578.1 bits), Expect = 1.1e-170, Sum P(2) = 1.1e-170
Identities = 332/742 (44%), Positives = 467/742 (62%)
Query: 498 SALVREIREKQTQNKSRQRFWELAGSQMGNI-LGVKKTAEQVDADTAVVGEQGEIDFRED 556
S V + E+ QR WE A ++ G + A Q V+ E+ I+F
Sbjct: 310 SRAVDLVEEESGAPGEEQRRWEEARLGAASLKFGARDAASQEPKYQLVLEEEETIEFVRA 369
Query: 557 AKFSQHMK-KGEAVSDFAKSKTLAEQ-RQYLPIFSVRDELLQVIRENQXXXXXGETGSGK 614
+ + + G + A+ K + R+ LP+F R+ELL I ++Q GETGSGK
Sbjct: 370 TQLQGNEEPSGPSPPSQAQQKESVQAVRRSLPVFPFREELLAAIADHQVLIIEGETGSGK 429
Query: 615 TTQLTQYLLEDGYTTNGI-VGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTG 673
TTQ+ QYL E+GYT G+ + CTQPRRVAAMSVA RV+ EM +LG++VGY+IRFED T
Sbjct: 430 TTQIPQYLFEEGYTKKGMKIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTS 489
Query: 674 PSTLIKYMTDGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKL 733
T+++YMTDG+LLRE L + DL Y V+++DEAHER+L TD+LFG++K V R + K+
Sbjct: 490 ERTVLRYMTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKV 549
Query: 734 IVTSATLNAQKFSDFFGSVPIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPP 793
+V SATL+ +FS FF P+F IPGR FPV+ Y+K P DY+EA V + IH+T PP
Sbjct: 550 LVASATLDTARFSTFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPP 609
Query: 794 GDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAK 853
GDIL+F+TGQ+EIEAAC L++R +L S ++ ELL+LPIY+ LP+D+QA+IF+
Sbjct: 610 GDILVFLTGQEEIEAACEMLQDRCRRLGS----KIRELLVLPIYANLPSDMQARIFQPTP 665
Query: 854 EGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXX 913
G RK +VATNIAETSLT++GI YV+D G+ K K YNP+ GM++L V P S
Sbjct: 666 PGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAG 725
Query: 914 XXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPP 973
C+RLYT AY +E+ + VPEIQRT+LGNVV FDF+DPP
Sbjct: 726 RAGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPP 785
Query: 974 PQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIV 1033
P E +L ++ QL+ LGALN++G LT G KM E P+DP L+KM+L E+ C +E+LT+
Sbjct: 786 PYETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVA 845
Query: 1034 SMLSVP-SVFFRPKDRAEESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLH 1092
+MLSV S+F+RPKD+ +D AR FF+ DHL LL VY QW E Y WC E+++
Sbjct: 846 AMLSVNNSIFYRPKDKVVHADNARVNFFLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQ 905
Query: 1093 VKSLRKAREVRSQLLDILKTLKIPLTSSGHDFDVVRKAICSAYFHNAARLKGVGEYINCR 1152
+S+R+AR+VR QL +L+ +++ L+S D+ VRKAI + YF++ ARL G Y +
Sbjct: 906 FRSMRRARDVREQLEGLLERVEVGLSSCQGDYIRVRKAITAGYFYHTARLTRSG-YRTVK 964
Query: 1153 NGMPCHLHPSSAIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFFSVKDS 1212
+HP+S+++ P +++YHEL+LTTKE+M+ +E WL E+ P ++ K+
Sbjct: 965 QQQTVFIHPNSSLFE--EQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYYKAKEL 1022
Query: 1213 DTSMLEHKKKQKESKTAMEEEM 1234
+ H KK + EE+
Sbjct: 1023 EDP---HSKKMPKKIGKTREEL 1041
Score = 53 (23.7 bits), Expect = 1.1e-170, Sum P(2) = 1.1e-170
Identities = 19/70 (27%), Positives = 31/70 (44%)
Query: 164 DRDDRGSERKYLKDDTRSESRGPSRRDNYDSKGRYRGREARDRDEPEYGGEYGRKRSKYD 223
+ ++ SE+ K ++ P D ++ R R ++ +RD E R+R K D
Sbjct: 137 EEEEEISEKGRRKTGGSKQTEKPESEDEWERTERERLQDLEERDA---FAERVRQRDK-D 192
Query: 224 GTRRTPGRSD 233
TR RSD
Sbjct: 193 RTRNVLERSD 202
>UNIPROTKB|E1BF68 [details] [associations]
symbol:DHX16 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12813 GeneTree:ENSGT00700000104241 OMA:GTLHREF
CTD:8449 EMBL:DAAA02055402 IPI:IPI00691986 RefSeq:NP_001193139.1
UniGene:Bt.22201 PRIDE:E1BF68 Ensembl:ENSBTAT00000009148
GeneID:506405 KEGG:bta:506405 NextBio:20867594 Uniprot:E1BF68
Length = 1045
Score = 1623 (576.4 bits), Expect = 3.0e-170, Sum P(2) = 3.0e-170
Identities = 329/736 (44%), Positives = 463/736 (62%)
Query: 504 IREKQTQNKSRQRFWELAGSQMGNI-LGVKKTAEQVDADTAVVGEQGEIDFREDAKFS-- 560
+ E+ QR WE A ++ G + A Q V+ E+ I+F +
Sbjct: 319 VEEESGAPGEEQRRWEEARLGAASLKFGARDAASQEPKYQLVLEEEETIEFVRATQLQGD 378
Query: 561 QHMKKGEAVSDFAKSKTLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQ 620
+ A + + +++ R+ LP+F R+ELL I +Q GETGSGKTTQ+ Q
Sbjct: 379 EEPSAPPAPTQAQQKESIQAVRRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQ 438
Query: 621 YLLEDGYTTNGI-VGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIK 679
YL E+GYT G+ + CTQPRRVAAMSVA RV+ EM +LG++VGY+IRFED T T+++
Sbjct: 439 YLFEEGYTKKGMKIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLR 498
Query: 680 YMTDGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSAT 739
YMTDG+LLRE L + DL Y V+++DEAHER+L TD+LFG++K V R + K++V SAT
Sbjct: 499 YMTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASAT 558
Query: 740 LNAQKFSDFFGSVPIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIF 799
L+ +FS FF PIF IPGR FPV+ Y+K P DY+EA V + IH+T PPGDIL+F
Sbjct: 559 LDTARFSTFFDDAPIFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVF 618
Query: 800 MTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKC 859
+TGQ+EIEAAC L++R +L S ++ ELL+LPIY+ LP+D+QA+IF+ G RK
Sbjct: 619 LTGQEEIEAACEMLQDRCRRLGS----KIRELLVLPIYANLPSDMQARIFQPTPPGARKV 674
Query: 860 IVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXX 919
+VATNIAETSLT++GI YV+D G+ K K YNP+ GM++L V P S
Sbjct: 675 VVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVA 734
Query: 920 XXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENIL 979
C+RLYT AY +E+ + VPEIQRT+LGNVV FDF+DPPP E +L
Sbjct: 735 AGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLL 794
Query: 980 NSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVP 1039
++ QL+ LGALN++G LT G KM E P+DP L+KM+L E+ C +E+LT+ +MLSV
Sbjct: 795 LALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVN 854
Query: 1040 -SVFFRPKDRAEESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRK 1098
S+F+RPKD+ +D AR FF+ DHL LL VY QW E Y WC E+++ +S+R+
Sbjct: 855 NSIFYRPKDKVVHADNARVNFFLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRR 914
Query: 1099 AREVRSQLLDILKTLKIPLTSSGHDFDVVRKAICSAYFHNAARLKGVGEYINCRNGMPCH 1158
AR+VR QL +L+ +++ L+S D+ VRKAI + YF++ ARL G Y +
Sbjct: 915 ARDVREQLEGLLERVEVGLSSCQGDYIRVRKAITAGYFYHTARLTRSG-YRTVKQQQTVF 973
Query: 1159 LHPSSAIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFFSVKDSDTSMLE 1218
+HP+S+++ P +++YHEL+LTTKE+M+ +E WL E+ P ++ K+ +
Sbjct: 974 IHPNSSLFE--EQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYYKAKELEDP--- 1028
Query: 1219 HKKKQKESKTAMEEEM 1234
H KK + EE+
Sbjct: 1029 HAKKMPKKIGKTREEL 1044
Score = 54 (24.1 bits), Expect = 3.0e-170, Sum P(2) = 3.0e-170
Identities = 19/71 (26%), Positives = 34/71 (47%)
Query: 164 DRDDRGSER-KYLKDDTRSESRGPSRRDNYDSKGRYRGREARDRDEPEYGGEYGRKRSKY 222
+ +++ SE+ K + + ++ P D ++ R R ++ +RD E R+R K
Sbjct: 139 EEEEQVSEKGKRKTGEKKEQTEKPESEDEWERTERERLQDLEERDA---FAERVRQRDK- 194
Query: 223 DGTRRTPGRSD 233
D TR RSD
Sbjct: 195 DRTRNVLERSD 205
Score = 43 (20.2 bits), Expect = 4.3e-169, Sum P(2) = 4.3e-169
Identities = 12/48 (25%), Positives = 23/48 (47%)
Query: 171 ERKYLKDDTRSESRGPSRRDNYDSKGRYRGREARDRDE-PEYGGEYGR 217
+RK+L+ +E + KG+ + E +++ E PE E+ R
Sbjct: 124 KRKHLRKKREAEEED-EEEEQVSEKGKRKTGEKKEQTEKPESEDEWER 170
Score = 43 (20.2 bits), Expect = 4.3e-169, Sum P(2) = 4.3e-169
Identities = 20/118 (16%), Positives = 51/118 (43%)
Query: 468 DGRIVFTKQAEPVMPIKDPTSDMAIISRKGSALVREIREKQTQNKSRQRFWELAGSQMGN 527
+ R + K ++ S + R GS++ ++ ++++ K R+ E + +
Sbjct: 86 EARALLEKNRSYMLLEDSEESSEETVGRAGSSVQKKRKKRKHLRKKREAEEEDEEEEQVS 145
Query: 528 ILGVKKTAEQVDADTAVVGEQGEIDFREDAKFSQHMKKGEAVSDFAKSKTLAEQRQYL 585
G +KT E+ + T + E + R + + Q +++ +A ++ + + R L
Sbjct: 146 EKGKRKTGEKKE-QTEKPESEDEWE-RTERERLQDLEERDAFAERVRQRDKDRTRNVL 201
>UNIPROTKB|F1RU83 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:GTLHREF EMBL:CU480634
Ensembl:ENSSSCT00000001498 Uniprot:F1RU83
Length = 1045
Score = 1622 (576.0 bits), Expect = 1.6e-169, Sum P(2) = 1.6e-169
Identities = 327/736 (44%), Positives = 463/736 (62%)
Query: 504 IREKQTQNKSRQRFWELAGSQMGNI-LGVKKTAEQVDADTAVVGEQGEIDFREDAKFS-- 560
+ E+ QR WE A ++ G + A Q V+ E+ I+F +
Sbjct: 319 VEEESGAPGEEQRRWEEARLGAASLKFGARDAASQEPKYQLVLEEEETIEFVRATQLQGD 378
Query: 561 QHMKKGEAVSDFAKSKTLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQ 620
+ A + + +++ R+ LP+F R+ELL + +Q GETGSGKTTQ+ Q
Sbjct: 379 EEPAAPPAPTQAQQKESIQAVRRSLPVFPFREELLAAVANHQILIIEGETGSGKTTQIPQ 438
Query: 621 YLLEDGYTTNGI-VGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIK 679
YL E+GYT G+ + CTQPRRVAAMSVA RV+ EM +LG++VGY+IRFED T T+++
Sbjct: 439 YLFEEGYTQKGMKIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLR 498
Query: 680 YMTDGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSAT 739
YMTDG+LLRE L + DL Y V+++DEAHER+L TD+LFG++K V R + K++V SAT
Sbjct: 499 YMTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASAT 558
Query: 740 LNAQKFSDFFGSVPIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIF 799
L+ +FS FF P+F IPGR FPV+ Y+K P DY+EA V + IH+T PPGDIL+F
Sbjct: 559 LDTARFSTFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVF 618
Query: 800 MTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKC 859
+TGQ+EIEAAC L++R +L S ++ ELL+LPIY+ LP+D+QA+IF+ G RK
Sbjct: 619 LTGQEEIEAACEMLQDRCRRLGS----KIRELLVLPIYANLPSDMQARIFQPTPPGARKV 674
Query: 860 IVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXX 919
+VATNIAETSLT++GI YV+D G+ K K YNP+ GM++L V P S
Sbjct: 675 VVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVA 734
Query: 920 XXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENIL 979
C+RLYT AY +E+ + VPEIQRT+LGNVV FDF+DPPP E +L
Sbjct: 735 AGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLL 794
Query: 980 NSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVP 1039
++ QL+ LGALN++G LT G KM E P+DP L+KM+L E+ C +E+LT+ +MLSV
Sbjct: 795 LALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVN 854
Query: 1040 -SVFFRPKDRAEESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRK 1098
S+F+RPKD+ +D AR FF+ DHL LL VY QW E Y WC E+++ +S+R+
Sbjct: 855 NSIFYRPKDKVVHADNARVNFFLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRR 914
Query: 1099 AREVRSQLLDILKTLKIPLTSSGHDFDVVRKAICSAYFHNAARLKGVGEYINCRNGMPCH 1158
AR+VR QL +L+ +++ L+S D+ VRKAI + YF++ ARL G Y +
Sbjct: 915 ARDVREQLEGLLERVEVGLSSCQGDYIRVRKAITAGYFYHTARLTRSG-YRTVKQQQTVF 973
Query: 1159 LHPSSAIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFFSVKDSDTSMLE 1218
+HP+S+++ P +++YHEL+LTTKE+M+ +E WL E+ P ++ K+ +
Sbjct: 974 IHPNSSLFE--EQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYYKAKELEDP--- 1028
Query: 1219 HKKKQKESKTAMEEEM 1234
H KK + EE+
Sbjct: 1029 HAKKMPKKTGKTREEL 1044
Score = 48 (22.0 bits), Expect = 1.6e-169, Sum P(2) = 1.6e-169
Identities = 16/55 (29%), Positives = 26/55 (47%)
Query: 179 TRSESRGPSRRDNYDSKGRYRGREARDRDEPEYGGEYGRKRSKYDGTRRTPGRSD 233
++ ++ P D ++ R R ++ +RD E R+R K D TR RSD
Sbjct: 155 SKPQTEKPESEDEWERTERERLQDLEERDA---FAERVRQRDK-DRTRNVLERSD 205
Score = 44 (20.5 bits), Expect = 4.3e-169, Sum P(2) = 4.3e-169
Identities = 14/50 (28%), Positives = 25/50 (50%)
Query: 197 RYRGREARDRDEPEYGGEYGRKRSKYDGTRRTPGRSDWDDGRWEWEDTPR 246
R + +E + +E E E G+K + G++ + + +D EWE T R
Sbjct: 129 RKKRQEEEEEEEEEEVPEKGKKTT--GGSKPQTEKPESED---EWERTER 173
Score = 38 (18.4 bits), Expect = 1.9e-168, Sum P(2) = 1.9e-168
Identities = 9/31 (29%), Positives = 20/31 (64%)
Query: 485 DPTSDMAIISRKGSALVREIREKQTQNKSRQ 515
+ +S+ A+ R GS+L ++ ++++ K RQ
Sbjct: 104 EESSEEAV-GRAGSSLQKKRKKRKHLRKKRQ 133
Score = 37 (18.1 bits), Expect = 2.4e-168, Sum P(2) = 2.4e-168
Identities = 7/28 (25%), Positives = 12/28 (42%)
Query: 80 DEEEKSESSGIDEVVSNATNGKRSHASR 107
+EEE+ E + E T G + +
Sbjct: 134 EEEEEEEEEEVPEKGKKTTGGSKPQTEK 161
>TAIR|locus:2062492 [details] [associations]
symbol:MEE29 "maternal effect embryo arrest 29"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009793 "embryo development ending in
seed dormancy" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CP002685 GO:GO:0003676 GO:GO:0009793
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:RIDDHRD IPI:IPI00520097
RefSeq:NP_181077.3 UniGene:At.53041 ProteinModelPortal:F4IJV4
SMR:F4IJV4 PRIDE:F4IJV4 EnsemblPlants:AT2G35340.1 GeneID:818101
KEGG:ath:AT2G35340 Uniprot:F4IJV4
Length = 1044
Score = 1623 (576.4 bits), Expect = 2.1e-169, Sum P(2) = 2.1e-169
Identities = 309/671 (46%), Positives = 448/671 (66%)
Query: 562 HMKKGEAVSDFAKSKTLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQY 621
H K + + + L E R+ LPI++ RD+LL ++++Q GETGSGKTTQ+ QY
Sbjct: 381 HAKPSQDSAGKSAFHMLQEDRKALPIYTYRDQLLNAVKDHQVLIIVGETGSGKTTQIPQY 440
Query: 622 LLEDGYTTNGIVGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYM 681
L E GYT G VGCTQPRRVAAMSVA RV++EM +LG +VGY+IRFED T T++KYM
Sbjct: 441 LHEAGYTKLGKVGCTQPRRVAAMSVAARVAQEMGGKLGHEVGYSIRFEDCTSEKTILKYM 500
Query: 682 TDGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLN 741
TDG+LLRE L + DL Y VI++DEAHER+L TD+LFG++K + R D KL+++SAT++
Sbjct: 501 TDGMLLRELLGEPDLGSYSVIIVDEAHERTLRTDILFGLVKDIARARPDLKLLISSATMD 560
Query: 742 AQKFSDFFGSVPIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMT 801
A+KFSDFF PIF PGR +PV+ ++ P DY++AA+ +TIH+ P GD+L+F+
Sbjct: 561 AEKFSDFFDQAPIFRFPGRRYPVDICFTTAPEADYMDAAITTVLTIHVKEPLGDVLVFLP 620
Query: 802 GQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIV 861
GQ+EIEA ++E ++ I ++ EL+I PIY+ LP++LQAKIFE EG RK ++
Sbjct: 621 GQEEIEA----VEENLKHKIRGLGTKIRELIICPIYANLPSELQAKIFEPTPEGARKVVL 676
Query: 862 ATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXX 921
ATNIAETSLT+DGI YV+D G+ KMK YNP+ GM++L V P+S
Sbjct: 677 ATNIAETSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLVTPISKASATQRTGRAGRTSPG 736
Query: 922 XCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNS 981
CYRLYT Y N++ + VPEIQRTNL +VV FDFMDPPP E ++ S
Sbjct: 737 KCYRLYTAFNYYNDLEDNTVPEIQRTNLASVVLSLKSLGIHNLLNFDFMDPPPSEALIKS 796
Query: 982 MYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSV-PS 1040
+ L+ LGALN +G LT G +M EFPLDP L+KM+++ ++ C DE+++I +MLS+ PS
Sbjct: 797 LELLFALGALNQLGELTKAGRRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIGPS 856
Query: 1041 VFFRPKDRAEESDAAREKFFVQE-SDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKA 1099
+F+RPKD+ +D A + F V DH+ L +Y WKE Y WC E+Y+ V+S+++A
Sbjct: 857 IFYRPKDKQVHADNAMKNFHVGNVGDHIAFLKIYNSWKETNYSTQWCYENYIQVRSMKRA 916
Query: 1100 REVRSQLLDILKTLKIPLTSSGHDFDVVRKAICSAYFHNAARLKGVGEYINCRNGMPCHL 1159
R++R QL +L+ ++I ++S+ ++ D +RK+I + +F + A+L+ G Y ++ H+
Sbjct: 917 RDIRDQLEGLLERVEIDVSSNANELDSIRKSIVAGFFPHTAKLQKNGSYRTVKHPQTVHI 976
Query: 1160 HPSSAIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFFSVKDSDTSMLEH 1219
HP+S + + P +VVYH+L+LT+KEYM+ T ++P+WL E+ P ++ +KD + +
Sbjct: 977 HPASGLSQV--LPRWVVYHQLVLTSKEYMRQVTELKPEWLIEIAPHYYQLKDVEDAT--S 1032
Query: 1220 KKKQKESKTAM 1230
KK K S A+
Sbjct: 1033 KKMPKTSGRAV 1043
Score = 46 (21.3 bits), Expect = 2.1e-169, Sum P(2) = 2.1e-169
Identities = 17/87 (19%), Positives = 38/87 (43%)
Query: 501 VREIREKQTQNKSRQRFWEL--AGSQMGNILGVKKTAEQVDADTAVVGEQGEIDFREDAK 558
+ E+ +K TQ + + + A Q G++ K+ A V + + F E
Sbjct: 272 IYELIKKSTQEEDNVGEYRMPDAYDQQGSVDQEKRFAVSVQRYRDMGSAEKMNPFAEQEA 331
Query: 559 FSQHMKKGEAVSDFAKSKTLAEQRQYL 585
+ H + A+ AK+K +++ +++
Sbjct: 332 WEDHQIENAALKFGAKNKEVSDNYEFV 358
>UNIPROTKB|Q767K6 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0008380
GO:GO:0006397 GO:GO:0003676 EMBL:AB113357 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AB113356 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 HOVERGEN:HBG039428 CTD:8449 OrthoDB:EOG4VHK5Q
RefSeq:NP_001116578.1 UniGene:Ssc.15273 ProteinModelPortal:Q767K6
GeneID:100144456 KEGG:ssc:100144456 Uniprot:Q767K6
Length = 1045
Score = 1622 (576.0 bits), Expect = 4.3e-169, Sum P(2) = 4.3e-169
Identities = 327/736 (44%), Positives = 463/736 (62%)
Query: 504 IREKQTQNKSRQRFWELAGSQMGNI-LGVKKTAEQVDADTAVVGEQGEIDFREDAKFS-- 560
+ E+ QR WE A ++ G + A Q V+ E+ I+F +
Sbjct: 319 VEEESGAPGEEQRRWEEARLGAASLKFGARDAASQEPKYQLVLEEEETIEFVRATQLQGD 378
Query: 561 QHMKKGEAVSDFAKSKTLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQ 620
+ A + + +++ R+ LP+F R+ELL + +Q GETGSGKTTQ+ Q
Sbjct: 379 EEPAAPPAPTQAQQKESIQAVRRSLPVFPFREELLAAVANHQILIIEGETGSGKTTQIPQ 438
Query: 621 YLLEDGYTTNGI-VGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIK 679
YL E+GYT G+ + CTQPRRVAAMSVA RV+ EM +LG++VGY+IRFED T T+++
Sbjct: 439 YLFEEGYTQKGMKIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLR 498
Query: 680 YMTDGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSAT 739
YMTDG+LLRE L + DL Y V+++DEAHER+L TD+LFG++K V R + K++V SAT
Sbjct: 499 YMTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASAT 558
Query: 740 LNAQKFSDFFGSVPIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIF 799
L+ +FS FF P+F IPGR FPV+ Y+K P DY+EA V + IH+T PPGDIL+F
Sbjct: 559 LDTARFSTFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVF 618
Query: 800 MTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKC 859
+TGQ+EIEAAC L++R +L S ++ ELL+LPIY+ LP+D+QA+IF+ G RK
Sbjct: 619 LTGQEEIEAACEMLQDRCRRLGS----KIRELLVLPIYANLPSDMQARIFQPTPPGARKV 674
Query: 860 IVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXX 919
+VATNIAETSLT++GI YV+D G+ K K YNP+ GM++L V P S
Sbjct: 675 VVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVA 734
Query: 920 XXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENIL 979
C+RLYT AY +E+ + VPEIQRT+LGNVV FDF+DPPP E +L
Sbjct: 735 AGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLL 794
Query: 980 NSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVP 1039
++ QL+ LGALN++G LT G KM E P+DP L+KM+L E+ C +E+LT+ +MLSV
Sbjct: 795 LALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVN 854
Query: 1040 -SVFFRPKDRAEESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRK 1098
S+F+RPKD+ +D AR FF+ DHL LL VY QW E Y WC E+++ +S+R+
Sbjct: 855 NSIFYRPKDKVVHADNARVNFFLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRR 914
Query: 1099 AREVRSQLLDILKTLKIPLTSSGHDFDVVRKAICSAYFHNAARLKGVGEYINCRNGMPCH 1158
AR+VR QL +L+ +++ L+S D+ VRKAI + YF++ ARL G Y +
Sbjct: 915 ARDVREQLEGLLERVEVGLSSCQGDYIRVRKAITAGYFYHTARLTRSG-YRTVKQQQTVF 973
Query: 1159 LHPSSAIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFFSVKDSDTSMLE 1218
+HP+S+++ P +++YHEL+LTTKE+M+ +E WL E+ P ++ K+ +
Sbjct: 974 IHPNSSLFE--EQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYYKAKELEDP--- 1028
Query: 1219 HKKKQKESKTAMEEEM 1234
H KK + EE+
Sbjct: 1029 HAKKMPKKTGKTREEL 1044
Score = 44 (20.5 bits), Expect = 4.3e-169, Sum P(2) = 4.3e-169
Identities = 19/84 (22%), Positives = 33/84 (39%)
Query: 167 DRGSERKYLKDDTRSESRGPSRRDNYDSKGRYRGREAR----DRDEPEYGGEYGRKRSKY 222
++ + L+D S R + K R + + R + +E E E K K
Sbjct: 92 EKNRSYRLLEDSEESSEEAVGRAGSSLQKKRKKRKHLRKKRQEEEEEEEEEEVPEKGKKT 151
Query: 223 DGTRRTPGRSDWDDGRWEWEDTPR 246
G + P +++ + EWE T R
Sbjct: 152 TGGNK-P-QTEKPESEDEWERTER 173
Score = 38 (18.4 bits), Expect = 1.9e-168, Sum P(2) = 1.9e-168
Identities = 9/31 (29%), Positives = 20/31 (64%)
Query: 485 DPTSDMAIISRKGSALVREIREKQTQNKSRQ 515
+ +S+ A+ R GS+L ++ ++++ K RQ
Sbjct: 104 EESSEEAV-GRAGSSLQKKRKKRKHLRKKRQ 133
Score = 37 (18.1 bits), Expect = 2.4e-168, Sum P(2) = 2.4e-168
Identities = 7/28 (25%), Positives = 12/28 (42%)
Query: 80 DEEEKSESSGIDEVVSNATNGKRSHASR 107
+EEE+ E + E T G + +
Sbjct: 134 EEEEEEEEEEVPEKGKKTTGGNKPQTEK 161
>TAIR|locus:2033723 [details] [associations]
symbol:ESP3 "ENHANCED SILENCING PHENOTYPE 3" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=NAS] [GO:0008380 "RNA splicing" evidence=NAS]
[GO:0035194 "posttranscriptional gene silencing by RNA"
evidence=IMP] [GO:0016020 "membrane" evidence=IDA] [GO:0006306 "DNA
methylation" evidence=RCA] [GO:0006342 "chromatin silencing"
evidence=RCA] [GO:0007267 "cell-cell signaling" evidence=RCA]
[GO:0009616 "virus induced gene silencing" evidence=RCA]
[GO:0010267 "production of ta-siRNAs involved in RNA interference"
evidence=RCA] [GO:0035196 "production of miRNAs involved in gene
silencing by miRNA" evidence=RCA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0008380 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 GO:GO:0035194 OMA:GTLHREF EMBL:AY074318 EMBL:AY133872
IPI:IPI00543041 RefSeq:NP_174527.2 UniGene:At.40132
ProteinModelPortal:Q8VY00 IntAct:Q8VY00 PaxDb:Q8VY00 PRIDE:Q8VY00
EnsemblPlants:AT1G32490.1 GeneID:840143 KEGG:ath:AT1G32490
TAIR:At1g32490 InParanoid:Q8VY00 PhylomeDB:Q8VY00
ProtClustDB:CLSN2685836 ArrayExpress:Q8VY00 Genevestigator:Q8VY00
Uniprot:Q8VY00
Length = 1044
Score = 1619 (575.0 bits), Expect = 7.0e-169, Sum P(2) = 7.0e-169
Identities = 330/743 (44%), Positives = 476/743 (64%)
Query: 502 REIREKQTQNK-SRQRFWELAGSQMGNI---LGVKKTAEQVDADTAVVGEQGEIDFREDA 557
R++ + N + Q WE Q+G G K +Q D V E +I+F +++
Sbjct: 314 RDLDSTEKMNPFAEQEAWE--DHQIGKATLKFGAKN--KQASDDYQFVFED-QINFIKES 368
Query: 558 -----KFSQHMKKGEAVSDFAKS---KTLAEQRQYLPIFSVRDELLQVIRENQXXXXXGE 609
+ M + D A+ + L E R+ LPI++ RD+LL+ + E+Q G+
Sbjct: 369 VMAGENYEDAMDAKQKSQDLAEKTALEELQEVRRSLPIYTYRDQLLKAVEEHQVLVIVGD 428
Query: 610 TGSGKTTQLTQYLLEDGYTTNGIVGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFE 669
TGSGKTTQ+ QYL E GYT G VGCTQPRRVAAMSVA RV++EM +LG +VGY+IRFE
Sbjct: 429 TGSGKTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSVAARVAQEMGVKLGHEVGYSIRFE 488
Query: 670 DVTGPSTLIKYMTDGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRR 729
D T T++KYMTDG+LLRE L + DL Y V+++DEAHER+LSTD+LFG++K + R
Sbjct: 489 DCTSDKTVLKYMTDGMLLRELLGEPDLASYSVVIVDEAHERTLSTDILFGLVKDIARFRP 548
Query: 730 DFKLIVTSATLNAQKFSDFFGSVPIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHI 789
D KL+++SAT++A+KFSD+F + PIF PGR +PV Y+ P DY++AA+ +TIH+
Sbjct: 549 DLKLLISSATMDAEKFSDYFDTAPIFSFPGRRYPVEINYTSAPEADYMDAAIVTILTIHV 608
Query: 790 TSPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIF 849
P GDIL+F TGQ+EIE A LK R+ L T ++ EL+I PIY+ LP++LQAKIF
Sbjct: 609 REPLGDILVFFTGQEEIETAEEILKHRIRGL--GT--KIRELIICPIYANLPSELQAKIF 664
Query: 850 EKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXX 909
E EG RK ++ATNIAETSLT+DGI YV+D G+ KMK YNP+ GM++L + P+S
Sbjct: 665 EPTPEGARKVVLATNIAETSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLITPISKASAT 724
Query: 910 XXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDF 969
CYRLYT Y N++ + VPE+QRTNL +VV FDF
Sbjct: 725 QRAGRAGRTSPGKCYRLYTAFNYNNDLEENTVPEVQRTNLASVVLALKSLGIHDLINFDF 784
Query: 970 MDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEV 1029
MDPPP E ++ S+ L+ LGALN +G LT G +M EFPLDP L+KM+++ ++ C DE+
Sbjct: 785 MDPPPAEALVKSLELLFALGALNKLGELTKAGRRMAEFPLDPMLSKMIVVSDKYKCSDEI 844
Query: 1030 LTIVSMLSVP-SVFFRPKDRAEESDAAREKFFVQE-SDHLTLLYVYQQWKEHQYRGDWCE 1087
++I +MLS+ S+F+RPKD+ +D AR F DH+ LL VY WKE + WC
Sbjct: 845 ISIAAMLSIGGSIFYRPKDKQVHADNARMNFHTGNVGDHIALLKVYSSWKETNFSTQWCY 904
Query: 1088 EHYLHVKSLRKAREVRSQLLDILKTLKIPLTSSGHDFDVVRKAICSAYFHNAARLKGVGE 1147
E+Y+ V+S+++AR++R QL +L+ ++I ++S+ ++ D VRK+I + +F + A+L+ G
Sbjct: 905 ENYIQVRSMKRARDIRDQLEGLLERVEIDISSNLNELDSVRKSIVAGFFPHTAKLQKNGS 964
Query: 1148 YINCRNGMPCHLHPSSAIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFF 1207
Y ++ H+HP+S + + P +VVYHEL+LT+KEYM+ T ++P+WL EL P ++
Sbjct: 965 YRTVKHPQTVHIHPNSGLSQV--LPRWVVYHELVLTSKEYMRQVTELKPEWLIELAPHYY 1022
Query: 1208 SVKDSDTSMLEHKKKQKESKTAM 1230
+KD + + + K + K AM
Sbjct: 1023 QLKDVEDAASK-KMPKGAGKAAM 1044
Score = 45 (20.9 bits), Expect = 7.0e-169, Sum P(2) = 7.0e-169
Identities = 11/46 (23%), Positives = 21/46 (45%)
Query: 165 RDDRGSERKYLKDDTRSESRGPSRRDNYDSKGRYRGREARDRDEPE 210
+ D +++D+R R S D+ R R+ ++R+E E
Sbjct: 134 QSDESDGEVAVREDSRHVRRKVSEEDDGSESEEERVRDQKEREELE 179
Score = 40 (19.1 bits), Expect = 2.4e-168, Sum P(2) = 2.4e-168
Identities = 10/46 (21%), Positives = 24/46 (52%)
Query: 77 ASIDEEEKSESSGIDEVVSNATNGKRSHASRRYRETSAR-DITDAE 121
A +D ++ + +++ S + + K +R+R+ S + D +D E
Sbjct: 96 ALLDADDDEDEVVVEKKSSVSESRKSDKGKKRFRKKSGQSDESDGE 141
>DICTYBASE|DDB_G0285937 [details] [associations]
symbol:dhx16 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR002483 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01480
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0285937 GO:GO:0005524
GO:GO:0005634 GenomeReviews:CM000153_GR GO:GO:0008380 GO:GO:0006397
GO:GO:0003676 EMBL:AAFI02000082 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 Gene3D:1.20.1390.10 KO:K12813 GO:GO:0003724
RefSeq:XP_638017.1 EnsemblProtists:DDB0233398 GeneID:8625368
KEGG:ddi:DDB_G0285937 OMA:YLLEREV Uniprot:Q54MH3
Length = 1106
Score = 1595 (566.5 bits), Expect = 9.1e-167, Sum P(2) = 9.1e-167
Identities = 328/734 (44%), Positives = 471/734 (64%)
Query: 494 SRKGSALVREIREKQTQNKSRQRFWELAGSQMGNILGVKKTAEQVDADTAVVGEQGEIDF 553
S S+ E +E + QN+ + E G NI G + E V D ++ +
Sbjct: 378 SSSSSSYNPEQKEWE-QNRMKSAISENRGLSTANIGGGNEEYEYVFEDQIEFIKEEVLKQ 436
Query: 554 REDAKFSQHMKKGEAVSDFAKSKTLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSG 613
+ +K G+ S AK T+ E R+ LP++ R++L+ +RE Q GETGSG
Sbjct: 437 GQKGDGVMILKPGDDGSAQAKM-TIQEVRKSLPVYPYREQLIDAVREYQVLIIVGETGSG 495
Query: 614 KTTQLTQYLLEDGYTTNGIVGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTG 673
KTTQ+ QYL E G++ G +GCTQPRRVAAMSVA RV+EE+ +LG++VGY+IRFED T
Sbjct: 496 KTTQIPQYLHEAGFSKTGKIGCTQPRRVAAMSVAARVAEEVGCKLGNEVGYSIRFEDCTS 555
Query: 674 PSTLIKYMTDGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKL 733
T+++YMTDG+L+RE L DL Y V+++DEAHER+L TD+LFG+LK + R D KL
Sbjct: 556 QKTVLQYMTDGMLVREFLTAPDLASYSVLIIDEAHERTLHTDILFGLLKDITRFRPDLKL 615
Query: 734 IVTSATLNAQKFSDFFGSVPIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPP 793
+++SAT++A++FSD+F P F+IPGR + V T Y++ P DY++AAV + IHIT P
Sbjct: 616 LISSATMDAERFSDYFDGAPTFNIPGRKYEVTTHYTQAPEADYLDAAVVTVLQIHITEPL 675
Query: 794 GDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAK 853
GDIL+F+TGQ+E++ A L+ R L T ++ EL+I IYS LP DLQAKIFE
Sbjct: 676 GDILVFLTGQEEVDQAAEMLQTRTRGL--GT--KIKELIITRIYSTLPTDLQAKIFEPTP 731
Query: 854 EGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXX 913
RK ++ATNIAETSLT+DGI YVID G+ K K++NP+ GM++L + PVS
Sbjct: 732 PNARKVVLATNIAETSLTIDGIIYVIDPGFCKQKMFNPRTGMESLVITPVSRASANQRKG 791
Query: 914 XXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPP 973
C+RL+T A+ NE+ + +PEIQRTNLGNVV FDFMDPP
Sbjct: 792 RAGRVAPGKCFRLFTAWAFDNELEENTIPEIQRTNLGNVVLLLKSMGINDLMNFDFMDPP 851
Query: 974 PQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIV 1033
P + ++ ++ QL+ LGALN+ G LT LG KM EFP+DP L+KM++ E+ C +E+LTI
Sbjct: 852 PAQTLIAALEQLYALGALNDRGQLTKLGRKMAEFPVDPQLSKMIIASEKYKCSEEILTIC 911
Query: 1034 SMLSVPS-VFFRPKDRAEESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLH 1092
+MLSV + +F+RPKD+A +DAAR+ FF + DHLTL+ V+ QW+E Y WC E+++
Sbjct: 912 AMLSVGNTIFYRPKDKAFAADAARKLFFHPQGDHLTLMNVFNQWRESGYAVQWCFENFIQ 971
Query: 1093 VKSLRKAREVRSQLLDILKTLKIPLTSSGHDFDVVRKAICSAYFHNAARLKGVGEYINCR 1152
+S+++A++VR QL +L+ ++IPL S+ D D +RK I S +F+N+A+L+ G + +
Sbjct: 972 HRSMKRAQDVRDQLELLLERVEIPLVSNVDDTDSIRKCIASGFFYNSAKLEKSGLFRTTK 1031
Query: 1153 NGMPCHLHPSSAIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFFSVKD- 1211
+ +HPSS ++ P++VVYHEL+LTTKE+M+ ++ WL E+ P + KD
Sbjct: 1032 HNQSVQIHPSSCLFQS--PPKWVVYHELVLTTKEFMRQIVEIQSSWLHEIAPHIYKEKDV 1089
Query: 1212 SDTSMLEHK--KKQ 1223
+D L KKQ
Sbjct: 1090 NDNQKLPKNIGKKQ 1103
Score = 49 (22.3 bits), Expect = 9.1e-167, Sum P(2) = 9.1e-167
Identities = 15/47 (31%), Positives = 22/47 (46%)
Query: 167 DRGSERKYLKDDTRSESRGPSRRDNYDSKGRYRGREARDRD---EPE 210
D SERK K + + E + ++D D K R + + D EPE
Sbjct: 132 DSDSERKRKKKEKKKEKK--DKKDKKDKKSSTRKKSDNNWDDEIEPE 176
Score = 37 (18.1 bits), Expect = 1.7e-165, Sum P(2) = 1.7e-165
Identities = 11/53 (20%), Positives = 23/53 (43%)
Query: 165 RDDRGSERKYLKDDTRSESRGPSRRDNYDSKGRYRGREARDRDEPEYGGEYGR 217
RD++ +++K + D ES R++ + + + R + G E R
Sbjct: 247 RDEKSTKKKIVDDSETKESI--ERKNRLEQNEQLETERTKSRRKYLVGEEQKR 297
>UNIPROTKB|G4N1N4 [details] [associations]
symbol:MGG_07501 "ATP-dependent RNA helicase DHX8"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:CM001233 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12813 RefSeq:XP_003711413.1
EnsemblFungi:MGG_07501T0 GeneID:2683421 KEGG:mgr:MGG_07501
Uniprot:G4N1N4
Length = 1016
Score = 1576 (559.8 bits), Expect = 9.1e-167, Sum P(2) = 9.1e-167
Identities = 380/931 (40%), Positives = 534/931 (57%)
Query: 325 SRESSQSFEDGVADETYSEEHNYEI-TESMRLEMEYNSDRAWYDREEGTTMFD--TDSSS 381
S+ S D D S+ E+ + R E E S+R +R++G + D ++
Sbjct: 108 SKRVKISHGDDAEDADLSDGAREELQAQRDRAEREAFSNRL-KERDDGRSKKGGKEDLAT 166
Query: 382 FI---LGDDASYQKKEV-ELAKRLVRKDGSRMSLAQSKKLSQITADNHQW-EERQLLRSG 436
+ L DDA + + V +L +R SR + ++ +I Q EE LRSG
Sbjct: 167 SLRRSLADDAKGRSEAVADLRER------SRQEYFKKRETEKIALFRKQVAEETAELRSG 220
Query: 437 AVRGTELSTEFDDEEEHKVILLVHDTKPPFLDGRIVFTKQAEPVMPIKDPTSDMAIISRK 496
+ EF E K++ L+ + + D R + MP +D ++ I RK
Sbjct: 221 VALSEKEKAEF--AENRKLLALIEE-RLRIDDHRDGY------YMP-EDYITEKGKIDRK 270
Query: 497 GS--ALVREIREKQT--QNKSRQRFWELAGSQMGNILGVKKTAEQVDAD-TAVVGEQGEI 551
AL + EK Q K E Q K AE+ +A V+ E I
Sbjct: 271 KKEDALYKRYVEKDEYGQEKFVTEHEEWEREQAAKAKAQIKVAERDEAGYDYVMDEDQYI 330
Query: 552 DFREDAKFSQHMK--KGE-----AVSDFAKSKTLA--EQRQYLPIFSVRDELLQVIRENQ 602
+ D + K GE A D A+ + L+ E R+ LPI+ RDE L + + Q
Sbjct: 331 QWTRDTRLPGEGKVLTGEQLYLQAQIDAAEKRQLSMQETRKSLPIYVYRDEFLAALEQYQ 390
Query: 603 XXXXXGETGSGKTTQLTQYLLEDGYTTNGI-VGCTQPRRVAAMSVAKRVSEEMDTELGDK 661
GETGSGKTTQL QYL E GYT +G+ VGCTQPRRVAAMSVA RV++EM ++G++
Sbjct: 391 ILVIVGETGSGKTTQLPQYLHEAGYTKDGMRVGCTQPRRVAAMSVAARVADEMGVKVGNE 450
Query: 662 VGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLFGIL 721
VGY+IRFED T T++KYMTDG+LLRE + + DL Y +++DEAHER++ TD+L ++
Sbjct: 451 VGYSIRFEDNTSDKTILKYMTDGMLLREFMTEPDLSSYSALMIDEAHERTVHTDILLALV 510
Query: 722 KKVVARRRDFKLIVTSATLNAQKFSDFFGSVPIFHIPGRTFPVNTLYSKTPCEDYVEAAV 781
K + R+D KL+++SAT+NA+KF+ +F PIF+IPGR +PV+ Y+ P +Y+ AA+
Sbjct: 511 KDLARERKDLKLLISSATMNAEKFASYFDDAPIFNIPGRRYPVDIYYTPAPEANYLSAAI 570
Query: 782 KQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLP 841
IH T P GDILIF+TGQDEIEAA + E +L S V EL+I PIY+ LP
Sbjct: 571 TTVFQIHTTQPKGDILIFLTGQDEIEAAEMQITETARKLGS----RVKELVICPIYANLP 626
Query: 842 ADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVF 901
++LQ+KIFE E RK ++ATNIAETSLT+DGI YVID GY K VYNP GM L V
Sbjct: 627 SELQSKIFEPTPENARKVVLATNIAETSLTIDGIVYVIDPGYVKENVYNPATGMSNLVVV 686
Query: 902 PVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXX 961
P S C+RLYT+ AY+NEM S PEIQRTNL VV
Sbjct: 687 PCSRASANQRSGRAGRVGPGKCFRLYTKYAYMNEMEESTTPEIQRTNLNGVVLQLKSLGI 746
Query: 962 XXXXXFDFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGE 1021
F+FMDPPP E ++ ++ QL+ L LN+ G LT LG +M EFP DP LAK +L +
Sbjct: 747 NELLDFEFMDPPPTEALIGALNQLFALQGLNHKGELTKLGRQMAEFPTDPMLAKAVLAAD 806
Query: 1022 QLGCLDEVLTIVSMLSVPS-VFFRPKDRAEESDAAREKFFVQES-DHLTLLYVYQQWKEH 1079
+ GC++EVL+IV+MLS S +FFRPKD+ +DAAR +F V+E DH+TLL ++ QW +
Sbjct: 807 KEGCVEEVLSIVAMLSEASALFFRPKDKQVHADAARGRFTVKEGGDHVTLLNIWNQWLDS 866
Query: 1080 QYRGDWCEEHYLHVKSLRKAREVRSQLLDILKTLKIPLTSSG--HDFDVVRKAICSAYFH 1137
Y W +E++L +SL +AR+VR QL + + +++ L++ G + +++AI + +F
Sbjct: 867 DYSPIWSKENFLQQRSLTRARDVREQLSKLCERVEVTLSTCGGISNMPPIKRAITAGFFP 926
Query: 1138 NAARLKGVGE-YINCRNGMPCHLHPSSAIYGLGYTPEYVVYHELILTTKEYMQCATAVEP 1196
NAAR++ G+ Y +N ++HPSS + P V+Y+EL+ TTKEYM+ +EP
Sbjct: 927 NAARMQRSGDSYRTVKNNTTVYIHPSSVMMQEDPPPRMVIYYELVQTTKEYMRSCMPIEP 986
Query: 1197 QWLSELGPMFFSVKDSDTSMLEHKKKQKESK 1227
+WL+EL P F KD + LE KK K+ K
Sbjct: 987 KWLAELAPHFHKAKD--IAALEEKKLPKDRK 1015
Score = 68 (29.0 bits), Expect = 9.1e-167, Sum P(2) = 9.1e-167
Identities = 31/99 (31%), Positives = 43/99 (43%)
Query: 162 RHDRDDRGSERKYLKDDTRSESRGPSRRDNYDSKGRYRGREARDRDEPEYGGEYGRKRSK 221
R D+ S ++ + RS SR P+R + SK YR R A+D +Y R+ K
Sbjct: 29 RRDKKKESSSSRHSRSHRRSRSRSPARESS--SK-HYRSR-AKD-SRRDYDRHSSRRDDK 83
Query: 222 YDGTRRTPGRSDWDDGRWEWEDTPRREGYSNSSKRYQPS 260
D R DDG D P E ++SKR + S
Sbjct: 84 ED--RWADDEPLTDDGA----DEPEFE--QSASKRVKIS 114
Score = 50 (22.7 bits), Expect = 7.3e-165, Sum P(2) = 7.3e-165
Identities = 18/49 (36%), Positives = 25/49 (51%)
Query: 164 DRDDRGSERKYLKDDTRSESRGPSRRDNYDSKGRYRG-REARDRDEPEY 211
+RDD G +K K+D + R S D D+KGR + R+R EY
Sbjct: 150 ERDD-GRSKKGGKEDLATSLRR-SLAD--DAKGRSEAVADLRERSRQEY 194
>WB|WBGene00003392 [details] [associations]
symbol:mog-4 species:6239 "Caenorhabditis elegans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0018996
"molting cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0040020 "regulation of meiosis" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0007281 "germ cell development" evidence=IMP] [GO:0048589
"developmental growth" evidence=IMP] [GO:0010172 "embryonic body
morphogenesis" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001482 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF00437
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0002119 GO:GO:0008380 GO:GO:0006810 GO:GO:0018996
GO:GO:0006397 GO:GO:0003676 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 GO:GO:0048589 GO:GO:0010172 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0040022 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12813 EMBL:AF286900 EMBL:Z81462
EMBL:Z81457 PIR:T18832 RefSeq:NP_497027.1 UniGene:Cel.17139
ProteinModelPortal:O45244 SMR:O45244 DIP:DIP-24771N IntAct:O45244
MINT:MINT-1105817 STRING:O45244 PaxDb:O45244 EnsemblMetazoa:C04H5.6
GeneID:175117 KEGG:cel:CELE_C04H5.6 UCSC:C04H5.6 CTD:175117
WormBase:C04H5.6 GeneTree:ENSGT00700000104241 InParanoid:O45244
OMA:GTLHREF NextBio:886834 ArrayExpress:O45244 Uniprot:O45244
Length = 1008
Score = 1529 (543.3 bits), Expect = 5.9e-164, Sum P(3) = 5.9e-164
Identities = 301/659 (45%), Positives = 436/659 (66%)
Query: 574 KSKTLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNGI- 632
K ++ E R+ LP+++ RD ++ ++E+Q GETGSGKTTQL QYL E G+ G
Sbjct: 353 KKMSIEETRKSLPVYAFRDAFIEAVKEHQVLIIEGETGSGKTTQLPQYLYEAGFCEGGKR 412
Query: 633 VGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLK 692
+GCTQPRRVAAMSVA RV++E+ +LG +VGY+IRFED T T++KYMTDG+LLRE L
Sbjct: 413 IGCTQPRRVAAMSVAARVADEVGCKLGTQVGYSIRFEDCTSEKTVLKYMTDGMLLREFLN 472
Query: 693 DSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSV 752
+ DL Y V+++DEAHER+L TD+LFG++K + R+D KL+++SATL+A+KFS FF
Sbjct: 473 EPDLASYSVMMIDEAHERTLHTDILFGLVKDIARFRKDLKLLISSATLDAEKFSSFFDDA 532
Query: 753 PIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSP-PGDILIFMTGQDEIEAACF 811
PIF IPGR FPV+ Y++ P DYV+AA+ M IH+T P PGDIL+F+TGQ+EIE
Sbjct: 533 PIFRIPGRRFPVDIYYTQAPEADYVDAAIVTIMQIHLTQPLPGDILVFLTGQEEIETVQE 592
Query: 812 ALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLT 871
AL ER + L S ++ EL+ LP+Y+ LP+DLQAKIFE + RK ++ATNIAETS+T
Sbjct: 593 ALMERSKALGS----KIKELIPLPVYANLPSDLQAKIFEPTPKDARKVVLATNIAETSVT 648
Query: 872 VDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESA 931
+DGI YVID G+ K ++ + G++ L V +S C+RLYT A
Sbjct: 649 IDGINYVIDPGFSKQNSFDARSGVEHLHVVTISKAAANQRAGRAGRTGPGKCFRLYTAWA 708
Query: 932 YLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGAL 991
Y +E+ P+PEIQRTNLGNVV FDF+DPPPQE ++ ++ QL+ LGAL
Sbjct: 709 YKHELEEQPIPEIQRTNLGNVVLMLKSLGIHDLVHFDFLDPPPQETLVIALEQLYALGAL 768
Query: 992 NNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSV-PSVFFRPKDRAE 1050
N+ G LT LG +M EFP DP ++KM++ E+ C +E++TI +MLS +VF+RPK +
Sbjct: 769 NHRGELTKLGRRMAEFPCDPCMSKMIIASEKYECSEEIVTIAAMLSCNAAVFYRPKAQVI 828
Query: 1051 ESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQLLDIL 1110
+D+AR+ F+ DH+TL+ VY +W+E + WC E+Y+ +++++AR+VR QL+ +L
Sbjct: 829 HADSARKGFWSPAGDHITLMNVYNKWQESSFSQRWCVENYVQHRTMKRARDVRDQLVGLL 888
Query: 1111 KTLKIPLTSSGHDFDVVRKAICSAYFHNAARLKGVGEYINCRNGMPCHLHPSSAIYGLGY 1170
+ ++I T S D +RKAI + YF+N ++L G Y ++ H HP+S ++
Sbjct: 889 ERVEIE-TKSSTDTIKIRKAITAGYFYNVSKLDNTGHYKTVKHKHTTHPHPNSCLFE--E 945
Query: 1171 TPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFFSVKDSD--TSMLEHKKKQKESK 1227
TP +VVY EL+ T+KE+M+ + +E WL E+ P ++ ++ + T+ K K K K
Sbjct: 946 TPRWVVYFELVFTSKEFMREMSEIESGWLLEVAPHYYKGRELEDATNKKMPKNKGKSGK 1004
Score = 59 (25.8 bits), Expect = 5.9e-164, Sum P(3) = 5.9e-164
Identities = 21/90 (23%), Positives = 40/90 (44%)
Query: 423 DNHQWEERQLLRS----GAVRGTELSTEFDDEEEHKVILLVHDTKPPFLDGRIVFTKQAE 478
D +WEE QL+ S GA EF+ + KV + + P + +V T+ +
Sbjct: 294 DGAKWEEEQLMASMLHLGAKDAKRKEQEFELLLDEKVDF-IQALQMPGTNEEVVETEAEK 352
Query: 479 PVMPIKDPTSDMAIISRKGSALVREIREKQ 508
M I++ + + + + A + ++E Q
Sbjct: 353 KKMSIEETRKSLPVYAFR-DAFIEAVKEHQ 381
Score = 45 (20.9 bits), Expect = 5.9e-164, Sum P(3) = 5.9e-164
Identities = 11/42 (26%), Positives = 22/42 (52%)
Query: 74 SVAASIDEEEKSESSGIDEVVSNATNGKRSHASRRYRETSAR 115
++AA I+++EK ++ + E + K + + RE S R
Sbjct: 163 ALAARINKKEKDKTRNVMEKKRDDNKDKEGSSMDKLREESRR 204
>UNIPROTKB|O45244 [details] [associations]
symbol:mog-4 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-4" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001482 InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF00437 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0009792 GO:GO:0002119
GO:GO:0008380 GO:GO:0006810 GO:GO:0018996 GO:GO:0006397
GO:GO:0003676 GO:GO:0042127 GO:GO:0040035 GO:GO:0007281
GO:GO:0048589 GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0040022 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 EMBL:AF286900 EMBL:Z81462 EMBL:Z81457 PIR:T18832
RefSeq:NP_497027.1 UniGene:Cel.17139 ProteinModelPortal:O45244
SMR:O45244 DIP:DIP-24771N IntAct:O45244 MINT:MINT-1105817
STRING:O45244 PaxDb:O45244 EnsemblMetazoa:C04H5.6 GeneID:175117
KEGG:cel:CELE_C04H5.6 UCSC:C04H5.6 CTD:175117 WormBase:C04H5.6
GeneTree:ENSGT00700000104241 InParanoid:O45244 OMA:GTLHREF
NextBio:886834 ArrayExpress:O45244 Uniprot:O45244
Length = 1008
Score = 1529 (543.3 bits), Expect = 5.9e-164, Sum P(3) = 5.9e-164
Identities = 301/659 (45%), Positives = 436/659 (66%)
Query: 574 KSKTLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNGI- 632
K ++ E R+ LP+++ RD ++ ++E+Q GETGSGKTTQL QYL E G+ G
Sbjct: 353 KKMSIEETRKSLPVYAFRDAFIEAVKEHQVLIIEGETGSGKTTQLPQYLYEAGFCEGGKR 412
Query: 633 VGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLK 692
+GCTQPRRVAAMSVA RV++E+ +LG +VGY+IRFED T T++KYMTDG+LLRE L
Sbjct: 413 IGCTQPRRVAAMSVAARVADEVGCKLGTQVGYSIRFEDCTSEKTVLKYMTDGMLLREFLN 472
Query: 693 DSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSV 752
+ DL Y V+++DEAHER+L TD+LFG++K + R+D KL+++SATL+A+KFS FF
Sbjct: 473 EPDLASYSVMMIDEAHERTLHTDILFGLVKDIARFRKDLKLLISSATLDAEKFSSFFDDA 532
Query: 753 PIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSP-PGDILIFMTGQDEIEAACF 811
PIF IPGR FPV+ Y++ P DYV+AA+ M IH+T P PGDIL+F+TGQ+EIE
Sbjct: 533 PIFRIPGRRFPVDIYYTQAPEADYVDAAIVTIMQIHLTQPLPGDILVFLTGQEEIETVQE 592
Query: 812 ALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLT 871
AL ER + L S ++ EL+ LP+Y+ LP+DLQAKIFE + RK ++ATNIAETS+T
Sbjct: 593 ALMERSKALGS----KIKELIPLPVYANLPSDLQAKIFEPTPKDARKVVLATNIAETSVT 648
Query: 872 VDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESA 931
+DGI YVID G+ K ++ + G++ L V +S C+RLYT A
Sbjct: 649 IDGINYVIDPGFSKQNSFDARSGVEHLHVVTISKAAANQRAGRAGRTGPGKCFRLYTAWA 708
Query: 932 YLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGAL 991
Y +E+ P+PEIQRTNLGNVV FDF+DPPPQE ++ ++ QL+ LGAL
Sbjct: 709 YKHELEEQPIPEIQRTNLGNVVLMLKSLGIHDLVHFDFLDPPPQETLVIALEQLYALGAL 768
Query: 992 NNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSV-PSVFFRPKDRAE 1050
N+ G LT LG +M EFP DP ++KM++ E+ C +E++TI +MLS +VF+RPK +
Sbjct: 769 NHRGELTKLGRRMAEFPCDPCMSKMIIASEKYECSEEIVTIAAMLSCNAAVFYRPKAQVI 828
Query: 1051 ESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQLLDIL 1110
+D+AR+ F+ DH+TL+ VY +W+E + WC E+Y+ +++++AR+VR QL+ +L
Sbjct: 829 HADSARKGFWSPAGDHITLMNVYNKWQESSFSQRWCVENYVQHRTMKRARDVRDQLVGLL 888
Query: 1111 KTLKIPLTSSGHDFDVVRKAICSAYFHNAARLKGVGEYINCRNGMPCHLHPSSAIYGLGY 1170
+ ++I T S D +RKAI + YF+N ++L G Y ++ H HP+S ++
Sbjct: 889 ERVEIE-TKSSTDTIKIRKAITAGYFYNVSKLDNTGHYKTVKHKHTTHPHPNSCLFE--E 945
Query: 1171 TPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFFSVKDSD--TSMLEHKKKQKESK 1227
TP +VVY EL+ T+KE+M+ + +E WL E+ P ++ ++ + T+ K K K K
Sbjct: 946 TPRWVVYFELVFTSKEFMREMSEIESGWLLEVAPHYYKGRELEDATNKKMPKNKGKSGK 1004
Score = 59 (25.8 bits), Expect = 5.9e-164, Sum P(3) = 5.9e-164
Identities = 21/90 (23%), Positives = 40/90 (44%)
Query: 423 DNHQWEERQLLRS----GAVRGTELSTEFDDEEEHKVILLVHDTKPPFLDGRIVFTKQAE 478
D +WEE QL+ S GA EF+ + KV + + P + +V T+ +
Sbjct: 294 DGAKWEEEQLMASMLHLGAKDAKRKEQEFELLLDEKVDF-IQALQMPGTNEEVVETEAEK 352
Query: 479 PVMPIKDPTSDMAIISRKGSALVREIREKQ 508
M I++ + + + + A + ++E Q
Sbjct: 353 KKMSIEETRKSLPVYAFR-DAFIEAVKEHQ 381
Score = 45 (20.9 bits), Expect = 5.9e-164, Sum P(3) = 5.9e-164
Identities = 11/42 (26%), Positives = 22/42 (52%)
Query: 74 SVAASIDEEEKSESSGIDEVVSNATNGKRSHASRRYRETSAR 115
++AA I+++EK ++ + E + K + + RE S R
Sbjct: 163 ALAARINKKEKDKTRNVMEKKRDDNKDKEGSSMDKLREESRR 204
>POMBASE|SPBC19C2.01 [details] [associations]
symbol:cdc28 "ATP-dependent RNA helicase Cdc28"
species:4896 "Schizosaccharomyces pombe" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=TAS] [GO:0005524 "ATP binding"
evidence=IC] [GO:0005681 "spliceosomal complex" evidence=IC]
[GO:0005682 "U5 snRNP" evidence=ISO] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IMP] [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPBC19C2.01
GO:GO:0005524 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0005682 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0046540 GO:GO:0004004 EMBL:U48733 PIR:T46568 PIR:T50372
RefSeq:NP_595686.2 ProteinModelPortal:Q10752 STRING:Q10752
EnsemblFungi:SPBC19C2.01.1 GeneID:2540707 KEGG:spo:SPBC19C2.01
HOGENOM:HOG000175261 KO:K12813 OMA:RIDDHRD OrthoDB:EOG4SBJ63
NextBio:20801829 GO:GO:0045292 Uniprot:Q10752
Length = 1055
Score = 1559 (553.9 bits), Expect = 8.5e-162, Sum P(2) = 8.5e-162
Identities = 369/972 (37%), Positives = 541/972 (55%)
Query: 278 LSTPRSNGYAASPWDHISPSPVPIRAXXXXXXXXXXXXXXXXHQLTFSRESSQSFEDGVA 337
L P+S+ P S S P R ++ S ED V+
Sbjct: 100 LIEPQSHETPGKPLKKKSRSKTPKREIARRQRDEDEWESDEYEEVVDGSASHPIEEDSVS 159
Query: 338 DETYSEEHNYEITESMRLEMEYNSDRAWYDREEGTTMFDTDSSSFILGDDASYQKKEVEL 397
T + H+YE + E N R + EE D ++++ +D S + EL
Sbjct: 160 --TDFQNHDYEKSSDPETE-RLNDLREREEFEERLRRKDLEAATNEFVEDYSSKFSSEEL 216
Query: 398 AKRLVRKDG-SRMSLAQS--KKLSQITADNHQWEERQLLRSGAVRGTELSTEFDDEEEHK 454
A R + D S LA KK Q ++ ++LR +R E F E+ +
Sbjct: 217 ALRKLADDPESWRKLASELRKKSRQQYLKPRAQQQLEILRR-EIRDEEQL--FAGEKLTQ 273
Query: 455 VILLVHDTKPPFL---DGRIVFTKQA-EPVMPIKDPTSDMAIISRKGSALVREIREKQT- 509
+ + K L + R KQA E MP +D ++ + RK V R K +
Sbjct: 274 AEIRELEKKKELLRIAEERQRLEKQATEYQMP-EDYFTEQGKLDRKRKEEVLYQRYKDSN 332
Query: 510 ---QNK-----SRQRFWELAGSQMGNILGVKKTAEQVDAD-TAVVGEQGEIDFREDAKFS 560
QN+ + Q+ WE + + + V E +IDF D K S
Sbjct: 333 EGEQNEVTMGAAEQQRWEAQQINKALLFDQNEWLPPGEKQFDFVFDESQQIDFLLDTKLS 392
Query: 561 -QHMKKGEAVSDFAKSKTLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLT 619
++ + ++D K+L R+ LP++ +D+LL+ I E Q ETGSGKTTQL
Sbjct: 393 AENPVDTDKMTDVKVEKSLESSRKSLPVYQYKDDLLKAINEYQVLLIVAETGSGKTTQLP 452
Query: 620 QYLLEDGYTT-NGIVGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLI 678
Q+L E GYT N + CTQPRRVAAMSVA RV++EMD LG +VGY+IRFE+ T T+I
Sbjct: 453 QFLHEAGYTKGNKKICCTQPRRVAAMSVAARVAKEMDVRLGQEVGYSIRFENATSEKTVI 512
Query: 679 KYMTDGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSA 738
KY+TDG+LLRE L + DL Y VI++DEAHER+L TD+LFG++K + R D K++++SA
Sbjct: 513 KYLTDGMLLREFLTEPDLASYSVIIIDEAHERTLHTDILFGLVKDIARFRPDLKVLISSA 572
Query: 739 TLNAQKFSDFFGSVPIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILI 798
T++A+KFS +F P+F++PGR +PV+ Y+ P +Y++AA+ + IH T P GDIL+
Sbjct: 573 TIDAEKFSAYFDEAPVFYVPGRRYPVDIYYTPQPEANYIQAAITTILQIHTTQPAGDILV 632
Query: 799 FMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRK 858
F+TGQDEIE + E M++L + +PE+++ PIY+ LP++LQAKIF+ G RK
Sbjct: 633 FLTGQDEIEL----MSENMQELCRILGKRIPEIILCPIYANLPSELQAKIFDPTPPGARK 688
Query: 859 CIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXX 918
++ATNIAETS+T+DG+ +VID+G+ K +YNP+ GM++L P S
Sbjct: 689 VVLATNIAETSITIDGVNFVIDSGFVKQNMYNPRTGMESLVSVPCSRASADQRAGRAGRV 748
Query: 919 XXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENI 978
C+RLYT Y NE+ PEIQRTNL N+V FDFMD PP E +
Sbjct: 749 GPGKCFRLYTRRTYNNELDMVTSPEIQRTNLTNIVLLLKSLGINNLLDFDFMDAPPPETL 808
Query: 979 LNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLS- 1037
+ S+ L+ LGALNN G LT LG +M EFP DP L+K L+ + GC++EVL+IVSML
Sbjct: 809 MRSLELLYALGALNNRGELTKLGRQMAEFPTDPMLSKSLIASSKYGCVEEVLSIVSMLGE 868
Query: 1038 VPSVFFRPKDRAEESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLR 1097
S+F+RPKD+ E+D AR F DHLTLL+++ +W + + +W E++L KSL
Sbjct: 869 ASSLFYRPKDKIMEADKARANFTQPGGDHLTLLHIWNEWVDTDFSYNWARENFLQYKSLC 928
Query: 1098 KAREVRSQLLDILKTLKIPL-TSSGHDFDVVRKAICSAYFHNAARLKGVGE-YINCRNGM 1155
+AR+VR QL ++ + ++I L T+S D ++KAI + YF NAARL G+ Y ++
Sbjct: 929 RARDVRDQLANLCERVEIELVTNSSESLDPIKKAITAGYFSNAARLDRSGDSYRTVKSNQ 988
Query: 1156 PCHLHPSSAIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFFSVKDSDTS 1215
++HPSS++ P+ ++Y EL+LTTKEY + T ++P+WL E+ P +F ++ +
Sbjct: 989 TVYIHPSSSV--AEKKPKVIIYFELVLTTKEYCRQITEIQPEWLLEISPHYFKPENIE-- 1044
Query: 1216 MLEHKKKQKESK 1227
E +K QK K
Sbjct: 1045 --ELQKTQKRHK 1054
Score = 38 (18.4 bits), Expect = 8.5e-162, Sum P(2) = 8.5e-162
Identities = 9/34 (26%), Positives = 17/34 (50%)
Query: 210 EYGGEYGRKRSKYDGTRRTPGRSDWDDGRWEWED 243
E G+ +K+S+ +R R D+ WE ++
Sbjct: 107 ETPGKPLKKKSRSKTPKREIARRQRDEDEWESDE 140
>FB|FBgn0086444 [details] [associations]
symbol:l(2)37Cb "lethal (2) 37Cb" species:7227 "Drosophila
melanogaster" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;ISS] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014134 GO:GO:0022008 GO:GO:0003676 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 KO:K12813 GO:GO:0016779 GeneTree:ENSGT00700000104241
OMA:GTLHREF EMBL:AY061330 RefSeq:NP_609946.1 UniGene:Dm.468
SMR:Q9VIZ3 IntAct:Q9VIZ3 MINT:MINT-318410 STRING:Q9VIZ3
EnsemblMetazoa:FBtr0081163 GeneID:35192 KEGG:dme:Dmel_CG10689
UCSC:CG10689-RA FlyBase:FBgn0086444 InParanoid:Q9VIZ3
OrthoDB:EOG459ZWG GenomeRNAi:35192 NextBio:792305 Uniprot:Q9VIZ3
Length = 894
Score = 1553 (551.7 bits), Expect = 2.0e-159, P = 2.0e-159
Identities = 316/739 (42%), Positives = 459/739 (62%)
Query: 503 EIREKQTQNKSRQRFWELAGSQMGNILGVKKTAEQVDADTAVVGEQGEIDF-----REDA 557
E+ E + Q S Q+ WE K A+ + ++ +Q IDF + +
Sbjct: 167 EVDEFEKQPNSEQKKWEAEQLASARFHFGAKDAKAEEEYELLLDDQ--IDFIQALTLDGS 224
Query: 558 KFSQHMKKGEAVSDFAKSKTLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQ 617
+ ++ E K TL E R+ LP++ +++L+ ++E+Q GETGSGKTTQ
Sbjct: 225 REKSSSRQPELTEKERKRLTLDETRRSLPVYPFKEDLIAAVKEHQVLIIEGETGSGKTTQ 284
Query: 618 LTQYLLEDGYTTNG-IVGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPST 676
+ QYL+E G+T + ++GCTQPRRVAAMSVA RV+EEM +LG++VGY+IRFED T T
Sbjct: 285 VPQYLVEAGFTKDKKMIGCTQPRRVAAMSVAARVAEEMGVKLGNEVGYSIRFEDCTSDRT 344
Query: 677 LIKYMTDGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVT 736
++KYMTDG L RE L + DL Y V+++DEAHER+L TD+LFG++K + R + KL+++
Sbjct: 345 ILKYMTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIARFRPELKLLIS 404
Query: 737 SATLNAQKFSDFFGSVPIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDI 796
SATL+A+KFS FF PIF IPGR +PV+ Y+K P DY++A + IH T P GDI
Sbjct: 405 SATLDAEKFSAFFDDAPIFRIPGRRYPVDIFYTKAPEADYIDACCVSVLQIHATQPLGDI 464
Query: 797 LIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGT 856
L+F+TGQDEIE L +R+++L S ++ EL+++P+Y+ LP+D+QAKIFE
Sbjct: 465 LVFLTGQDEIETCQEVLHDRVKRLGS----KIRELIVIPVYANLPSDMQAKIFEPTPPNA 520
Query: 857 RKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXX 916
RK I+ATNIAETSLT+D I YVID G+ K +N + GM++L V P+S
Sbjct: 521 RKVILATNIAETSLTIDNIIYVIDPGFAKQNNFNSRTGMESLMVVPISKASANQRAGRAG 580
Query: 917 XXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQE 976
C+RLYT AY +E+ + VPEIQR NLGN V FDF+DPPP E
Sbjct: 581 RTAPGKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHE 640
Query: 977 NILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSML 1036
++ ++ QL+ LGALN+ G LT LG +M EFP+DP + KMLL E+ C +E++TI +ML
Sbjct: 641 TLVLALEQLYALGALNHHGELTKLGRRMAEFPVDPMMGKMLLASEKYKCSEEMVTIAAML 700
Query: 1037 SVPS-VFFRPKDRAEESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKS 1095
SV S +F+RPKD+ +D AR+ F DHL+LL VY QW E Y WC E+++ +S
Sbjct: 701 SVNSAIFYRPKDKIIHADTARKNFNHMHGDHLSLLQVYNQWAETDYSTQWCYENFIQYRS 760
Query: 1096 LRKAREVRSQLLDILKTLKIPLTSSGHDFDVVRKAICSAYFHNAARLKGVGEYINCRNGM 1155
+++AR+VR QL+ +++ ++I + S + VRKA + YF++ ARL G Y ++
Sbjct: 761 MKRARDVREQLVGLMQRVEIDMVSCLPETVNVRKAATAGYFYHVARLSKGGHYKTIKHNQ 820
Query: 1156 PCHLHPSSAIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFFSVKDSDTS 1215
+HP+S+++ P +V+YHEL+ T+KEYM+ +E +WL E+ P ++ K+
Sbjct: 821 TVMIHPNSSLFE--ELPRWVLYHELVFTSKEYMRQVIEIESKWLLEVAPHYYKAKE---- 874
Query: 1216 MLEHKKKQKESKTAMEEEM 1234
LE +K K A EM
Sbjct: 875 -LEDSTNKKMPKVAGRAEM 892
>CGD|CAL0005059 [details] [associations]
symbol:orf19.2818 species:5476 "Candida albicans" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IEA] [GO:0000386
"second spliceosomal transesterification activity" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IEA]
[GO:0000350 "generation of catalytic spliceosome for second
transesterification step" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 CGD:CAL0005059
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACQ01000080 EMBL:AACQ01000079 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12815
RefSeq:XP_715749.1 RefSeq:XP_715799.1 STRING:Q5A227 GeneID:3642531
GeneID:3642595 KEGG:cal:CaO19.10336 KEGG:cal:CaO19.2818
Uniprot:Q5A227
Length = 1070
Score = 1515 (538.4 bits), Expect = 2.1e-155, P = 2.1e-155
Identities = 325/691 (47%), Positives = 446/691 (64%)
Query: 480 VMPIKDPTSDMAIISRKGSALVREIREKQTQNKSRQRFWELAGSQMGNILGVKKTAEQVD 539
V P+KDPTS++A ++++GS +V+ R K+ + + + S +G+I+ T E++
Sbjct: 276 VNPVKDPTSELASMAKQGSFVVQNRRSKRERALQAKEAAGVENSNIGSIIDTANTTEEIK 335
Query: 540 ADTAVVGEQGEIDFREDAKFSQHMKKGEAVSDFAKSKTLAEQRQYLPIFSVRDELLQVIR 599
E+ D E K + + +QR+ LP F+VR++LL IR
Sbjct: 336 Q------EEKNADVNE-----------------TKHQDIQQQRKSLPAFAVRNDLLTTIR 372
Query: 600 ENQXXXXXGETGSGKTTQLTQYLLEDGYTTN----G---IVGCTQPRRVAAMSVAKRVSE 652
+NQ GETGSGKTTQLTQ+L EDG+ N G I+ CTQPRRVAAMSVAKRVSE
Sbjct: 373 DNQVTIVIGETGSGKTTQLTQFLYEDGFGANIDKNGEKRIIACTQPRRVAAMSVAKRVSE 432
Query: 653 EMDTELGDKVGYAIRFEDVT-GPSTLIKYMTDGVLLRETLKDSDLDKYRVIVMDEAHERS 711
EM+ +LG++VGY+IRFED T T+IKYMT+G+LLRE L D L Y I+MDEAHERS
Sbjct: 433 EMNCKLGEEVGYSIRFEDKTDNKKTVIKYMTEGILLREILADPMLANYSCIIMDEAHERS 492
Query: 712 LSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPIFHIPGRTFPVNTLYSKT 771
L+TD+L G+ K ++A+R+D KLIVTSAT+NA +F+ FFG P FHIPGRTFPV +++
Sbjct: 493 LNTDILLGLFKNLLAKRKDLKLIVTSATMNANRFTKFFGVAPQFHIPGRTFPVEVFFNRD 552
Query: 772 PCEDYVEAAVKQAMTIHI--------TSPPGDILIFMTGQDEIEAACFALKERMEQLISS 823
DYVE AVKQ +TIH+ + GDIL+FMTGQ++IE C +KE++ L
Sbjct: 553 VNMDYVEMAVKQVLTIHLGRWNADNNNANDGDILVFMTGQEDIEITCDLIKEKLNLL--- 609
Query: 824 TTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGY 883
+ P L I PIYS +P DLQ KIF K RK +VATNIAETSLTVDGI YVID G
Sbjct: 610 --EDPPPLDIFPIYSTMPQDLQKKIFNKTNLQRRKVVVATNIAETSLTVDGIKYVIDCGL 667
Query: 884 GKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYL-NEMLPSPVP 942
K+KVYNPK+GMD LQV P+S YRLYTE A + M P+P
Sbjct: 668 VKVKVYNPKLGMDTLQVVPISLANADQRSGRAGRTGAGIAYRLYTEKATEPDSMYVQPIP 727
Query: 943 EIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILN-SMYQLWVLGALNNVGALTDLG 1001
EIQR+NL N++ F F+DPPP++ +LN S+Y LW +GAL+N+G LT LG
Sbjct: 728 EIQRSNLSNIMLLLKSLKVNDINSFPFLDPPPKD-LLNCSLYDLWAIGALDNLGELTKLG 786
Query: 1002 WKMVEFPLDPPLAKMLLMGEQ--LGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAAREKF 1059
M +FP++P LAK++L+ Q C +EV+TIV+MLSVP++F RPK+RA E+D AREKF
Sbjct: 787 HSMTQFPIEPTLAKLILLSTQPEFHCSEEVVTIVAMLSVPNIFNRPKERANEADMAREKF 846
Query: 1060 FVQESDHLTLLYVYQQWKEH--QYRGD------WCEEHYLHVKSLRKAREVRSQLLDILK 1111
+ ESDHLTLL V+ QW + +++G+ WC +++L +KSL +A++++ QL+ I+K
Sbjct: 847 IISESDHLTLLNVFNQWNINLNKFKGNYTKINNWCNKNFLQLKSLYRAKDIKHQLMLIMK 906
Query: 1112 TLKIPLTSSGHDFDVVRKAICSAYFHNAARL 1142
K+ + S D D+ RK +C++++ +A+L
Sbjct: 907 KNKLAILKSKTDDDI-RKCLCASFYQQSAKL 936
Score = 998 (356.4 bits), Expect = 1.3e-100, P = 1.3e-100
Identities = 208/461 (45%), Positives = 292/461 (63%)
Query: 794 GDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAK 853
GDIL+FMTGQ++IE C +KE++ L + P L I PIYS +P DLQ KIF K
Sbjct: 583 GDILVFMTGQEDIEITCDLIKEKLNLL-----EDPPPLDIFPIYSTMPQDLQKKIFNKTN 637
Query: 854 EGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXX 913
RK +VATNIAETSLTVDGI YVID G K+KVYNPK+GMD LQV P+S
Sbjct: 638 LQRRKVVVATNIAETSLTVDGIKYVIDCGLVKVKVYNPKLGMDTLQVVPISLANADQRSG 697
Query: 914 XXXXXXXXXCYRLYTESAYL-NEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDP 972
YRLYTE A + M P+PEIQR+NL N++ F F+DP
Sbjct: 698 RAGRTGAGIAYRLYTEKATEPDSMYVQPIPEIQRSNLSNIMLLLKSLKVNDINSFPFLDP 757
Query: 973 PPQENILN-SMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQ--LGCLDEV 1029
PP++ +LN S+Y LW +GAL+N+G LT LG M +FP++P LAK++L+ Q C +EV
Sbjct: 758 PPKD-LLNCSLYDLWAIGALDNLGELTKLGHSMTQFPIEPTLAKLILLSTQPEFHCSEEV 816
Query: 1030 LTIVSMLSVPSVFFRPKDRAEESDAAREKFFVQESDHLTLLYVYQQWKEH--QYRGD--- 1084
+TIV+MLSVP++F RPK+RA E+D AREKF + ESDHLTLL V+ QW + +++G+
Sbjct: 817 VTIVAMLSVPNIFNRPKERANEADMAREKFIISESDHLTLLNVFNQWNINLNKFKGNYTK 876
Query: 1085 ---WCEEHYLHVKSLRKAREVRSQLLDILKTLKIPLTSSGHDFDVVRKAICSAYFHNAAR 1141
WC +++L +KSL +A++++ QL+ I+K K+ + S D D+ RK +C++++ +A+
Sbjct: 877 INNWCNKNFLQLKSLYRAKDIKHQLMLIMKKNKLAILKSKTDDDI-RKCLCASFYQQSAK 935
Query: 1142 L-----KGVGEYINCRNG-MPCHLHPSSAIYGLGYTPEYVVYHELILTTKEYMQCATAVE 1195
L G E++N R+ M LHP+S++ + YV+YHEL+LT KEYM C T V+
Sbjct: 936 LTKMNLNGQPEFVNLRHSYMKMFLHPTSSLLDSNLSTNYVIYHELVLTKKEYMNCVTTVD 995
Query: 1196 PQWLSELGPMFFSVKDSDTSMLEHK---KKQKESKTAMEEE 1233
P WL E G FF V DS + ++ + KQK K ++++
Sbjct: 996 PIWLLEYGYKFFGVADSHRNKIDSEAILNKQKFEKQLLKDK 1036
>POMBASE|SPBC16H5.10c [details] [associations]
symbol:prp43 "ATP-dependent RNA helicase Prp43
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000390
"spliceosomal complex disassembly" evidence=ISO] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISO;ISS] [GO:0005524
"ATP binding" evidence=ISM] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005681 "spliceosomal complex" evidence=ISO] [GO:0006364 "rRNA
processing" evidence=ISS] [GO:0030686 "90S preribosome"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 PomBase:SPBC16H5.10c GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0005681 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 GO:GO:0000390 KO:K12820 OMA:TVLQIHA
EMBL:AB027819 PIR:T39615 RefSeq:NP_595937.1
ProteinModelPortal:O42945 IntAct:O42945 STRING:O42945
EnsemblFungi:SPBC16H5.10c.1 GeneID:2540057 KEGG:spo:SPBC16H5.10c
OrthoDB:EOG4S7NZ4 NextBio:20801194 Uniprot:O42945
Length = 735
Score = 1419 (504.6 bits), Expect = 3.2e-145, P = 3.2e-145
Identities = 294/709 (41%), Positives = 430/709 (60%)
Query: 543 AVVGEQGEIDFREDAKFSQHMKKGEAVSDFAKSKTLAEQRQYLPIFSVRDELLQVIRENQ 602
A E+G +F D FSQ+ K + E R+ LP++ R+E L++ ENQ
Sbjct: 45 AAKAEEGPNNFFNDKPFSQNYFK------------ILETRRELPVYQQREEFLKIYHENQ 92
Query: 603 XXXXXGETGSGKTTQLTQYLLEDG--YTTNGIVGCTQPRRVAAMSVAKRVSEEMDTELGD 660
GETGSGKTTQ+ Q++L D + TN + CTQPRRVAAMSVAKRV++EMD +LG+
Sbjct: 93 IIVFVGETGSGKTTQIPQFVLYDELPHLTNTQIACTQPRRVAAMSVAKRVADEMDVDLGE 152
Query: 661 KVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLFGI 720
+VGY IRFED +GP+TL+KYMTDG+LLRE + D L +Y I++DEAHER+L+TD+L G+
Sbjct: 153 EVGYNIRFEDCSGPNTLLKYMTDGMLLREAMTDHMLSRYSCIILDEAHERTLATDILMGL 212
Query: 721 LKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPIFHIPGRTFPVNTLYSKTPCEDYVEAA 780
+K++ RR D K+IV SATL+A+KF +F P+ +PGRT+PV Y++ P DY+EAA
Sbjct: 213 MKRLATRRPDLKIIVMSATLDAKKFQKYFFDAPLLAVPGRTYPVEIYYTQEPERDYLEAA 272
Query: 781 VKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQL 840
++ + IH+ PGDIL+F+TG++EIE AC + + L+ P L + P+Y L
Sbjct: 273 LRTVLQIHVEEGPGDILVFLTGEEEIEDACRKITLEADDLVREGAAG-P-LKVYPLYGSL 330
Query: 841 PADLQAKIFEKAKEGT-----RKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGM 895
P + Q +IFE E T RK +++TNIAETSLT+DGI YV+D G+ K K+YNP++ +
Sbjct: 331 PPNQQQRIFEPTPEDTKSGYGRKVVISTNIAETSLTIDGIVYVVDPGFSKQKIYNPRIRV 390
Query: 896 DALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXX 955
++L V P+S C+RLYTE A+ E++ PEI R+NL + V
Sbjct: 391 ESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEEAFRKELIEQTYPEILRSNLSSTVLE 450
Query: 956 XXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAK 1015
FD+MDPP E ++ ++ +L L L++ G LT LG K EFPLDP LA
Sbjct: 451 LKKLGIDDLVHFDYMDPPAPETMMRALEELNYLNCLDDNGDLTPLGRKASEFPLDPNLAV 510
Query: 1016 MLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAAREKFFVQESDHLTLLYVYQQ 1075
ML+ + C +EVL++ ++LSVP+VF RP + +D R++F + DHLTLL VY
Sbjct: 511 MLIRSPEFYCSNEVLSLTALLSVPNVFVRPNSARKLADEMRQQFTHPDGDHLTLLNVYHA 570
Query: 1076 WKEHQYRGDWCEEHYLHVKSLRKAREVRSQLLDILKTLKIPLTSSGHD----FDVVRKAI 1131
+K + DWC H+L ++L A VR QL ++ ++ L S+ D + +R+A+
Sbjct: 571 YKSGEGTADWCWNHFLSHRALISADNVRKQLRRTMERQEVELISTPFDDKNYYVNIRRAL 630
Query: 1132 CSAYFHNAARLKGVGE-YINCRNGMPCHLHPSSAIYGLGYTPEYVVYHELILTTKEYMQC 1190
S +F A+ G+ Y+ ++ LHPS GL TPE+VVY+E +LTTK +++
Sbjct: 631 VSGFFMQVAKKSANGKNYVTMKDNQVVSLHPSC---GLSVTPEWVVYNEFVLTTKSFIRN 687
Query: 1191 ATAVEPQWLSELGPMFFSVKDSDTSMLEHKKKQKESKTAMEEEMENLRK 1239
TA+ P+WL EL P ++ + D D + QK + A + +N R+
Sbjct: 688 VTAIRPEWLIELAPNYYDLDDFDNNKEVKSALQKVYQMAARSK-KNARR 735
>TAIR|locus:2065210 [details] [associations]
symbol:AT2G47250 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020 GO:GO:0008380
GO:GO:0006397 GO:GO:0009941 GO:GO:0003676 EMBL:AC002337
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
EMBL:AY128301 EMBL:BT004534 IPI:IPI00540033 PIR:H84912
RefSeq:NP_182247.1 UniGene:At.36388 ProteinModelPortal:O22899
SMR:O22899 PaxDb:O22899 PRIDE:O22899 EnsemblPlants:AT2G47250.1
GeneID:819338 KEGG:ath:AT2G47250 GeneFarm:1798 TAIR:At2g47250
InParanoid:O22899 KO:K12820 OMA:XEIDEAC PhylomeDB:O22899
ProtClustDB:CLSN2683587 Genevestigator:O22899 GermOnline:AT2G47250
Uniprot:O22899
Length = 729
Score = 1399 (497.5 bits), Expect = 5.4e-145, Sum P(2) = 5.4e-145
Identities = 275/679 (40%), Positives = 427/679 (62%)
Query: 578 LAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNG------ 631
+ E+R+ LP++ +D+ L + NQ GETGSGKTTQ+ Q++L+ N
Sbjct: 58 ILEKRRDLPVWLQKDDFLNTLNSNQTLILVGETGSGKTTQIPQFVLDAVVADNSDKGRKW 117
Query: 632 IVGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETL 691
+VGCTQPRRVAAMSV++RV++EMD +G++VGY+IRFED T T++KY+TDG+LLRE +
Sbjct: 118 LVGCTQPRRVAAMSVSRRVADEMDVSIGEEVGYSIRFEDCTSSRTMLKYLTDGMLLREAM 177
Query: 692 KDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGS 751
D L++Y+VI++DEAHER+L+TDVLFG+LK+V+ R D KL+V SATL A+KF ++F
Sbjct: 178 ADPLLERYKVIILDEAHERTLATDVLFGLLKEVLRNRPDLKLVVMSATLEAEKFQEYFSG 237
Query: 752 VPIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACF 811
P+ +PGR PV Y++ P DY+EAA++ + IH+ PPGDIL+F+TG++EIE AC
Sbjct: 238 APLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPPGDILVFLTGEEEIEDAC- 296
Query: 812 ALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAK----EGT---RKCIVATN 864
++ + +S+ +V + ++P+YS LP +Q KIF+ A EG RK +V+TN
Sbjct: 297 ---RKINKEVSNLGDQVGPVKVVPLYSTLPPAMQQKIFDPAPVPLTEGGPAGRKIVVSTN 353
Query: 865 IAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCY 924
IAETSLT+DGI YVID G+ K KVYNP++ +++L V P+S C+
Sbjct: 354 IAETSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGRAGRTRPGKCF 413
Query: 925 RLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQ 984
RLYTE ++ N++ P PEI R+NL N V FDFMDPP E ++ ++
Sbjct: 414 RLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEV 473
Query: 985 LWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFR 1044
L LGAL++ G LT G M EFPLDP ++KML++ + C +E+L++ +MLSVP+ F R
Sbjct: 474 LNYLGALDDEGNLTKTGEIMSEFPLDPQMSKMLIVSPEFNCSNEILSVSAMLSVPNCFVR 533
Query: 1045 PKDRAEESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRS 1104
P++ + +D A+ +F + DHLTLL VY +K++ +WC E++++ ++++ A VR
Sbjct: 534 PREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPNWCFENFVNNRAMKSADNVRQ 593
Query: 1105 QLLDILKTLKIPLTSS---GHDFDV-VRKAICSAYFHNAARLKGVGEYINCRNGMPCHLH 1160
QL+ I+ + + S+ D+ V +RKA+ + YF A L+ G Y+ ++ HLH
Sbjct: 594 QLVRIMSRFNLKMCSTDFNSRDYYVNIRKAMLAGYFMQVAHLERTGHYLTVKDNQVVHLH 653
Query: 1161 PSSAIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFFSVKDSDTSMLEHK 1220
PS+ L + PE+V+Y+E +LTT+ +++ T + +WL ++ ++ + + +
Sbjct: 654 PSNC---LDHKPEWVIYNEYVLTTRNFIRTVTDIRGEWLVDVAQHYYDLSNFPNCEAKRA 710
Query: 1221 KKQKESKTAMEEEMENLRK 1239
++ K E+ RK
Sbjct: 711 LEKLYKKREREKNESKNRK 729
Score = 39 (18.8 bits), Expect = 5.4e-145, Sum P(2) = 5.4e-145
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 35 ERPIFRAPGAKAQSGLGVRAVEKGGGSQI 63
E P + K+ +GLG+ A GGGS +
Sbjct: 16 EDPSLSSKNTKS-NGLGLAAAA-GGGSNL 42
>TAIR|locus:2095989 [details] [associations]
symbol:AT3G62310 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009560 "embryo sac egg
cell differentiation" evidence=RCA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005829 GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0005730 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 EMBL:AL162507 KO:K12820
ProtClustDB:CLSN2683587 OMA:TVLQIHA EMBL:AY120782 EMBL:BT010331
IPI:IPI00540868 PIR:T48023 RefSeq:NP_191790.1 UniGene:At.34140
UniGene:At.4777 ProteinModelPortal:Q9LZQ9 SMR:Q9LZQ9 IntAct:Q9LZQ9
PaxDb:Q9LZQ9 PRIDE:Q9LZQ9 EnsemblPlants:AT3G62310.1 GeneID:825404
KEGG:ath:AT3G62310 TAIR:At3g62310 InParanoid:Q9LZQ9
PhylomeDB:Q9LZQ9 ArrayExpress:Q9LZQ9 Genevestigator:Q9LZQ9
Uniprot:Q9LZQ9
Length = 726
Score = 1414 (502.8 bits), Expect = 1.1e-144, P = 1.1e-144
Identities = 278/679 (40%), Positives = 433/679 (63%)
Query: 578 LAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLE--DGYTTNG---- 631
+ E+R+ LP++ ++E L+ + NQ GETGSGKTTQ+ Q++++ D T++
Sbjct: 54 ILEKRRTLPVWLQKEEFLKTLNNNQTLILVGETGSGKTTQIPQFVIDAVDAETSDKRRKW 113
Query: 632 IVGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETL 691
+VGCTQPRRVAAMSV++RV+EEMD +G++VGY+IRFED + P T++KY+TDG+LLRE +
Sbjct: 114 LVGCTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSPRTVLKYLTDGMLLREAM 173
Query: 692 KDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGS 751
D L++Y+VI++DEAHER+L+TDVLFG+LK+V+ R D KL+V SATL A+KF D+F
Sbjct: 174 ADPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQDYFSG 233
Query: 752 VPIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACF 811
P+ +PGR PV Y++ P DY+EAA++ + IH+ PPGDIL+F+TG++EIE AC
Sbjct: 234 APLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPPGDILVFLTGEEEIEDAC- 292
Query: 812 ALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGT-------RKCIVATN 864
++ + + + +V + ++P+YS LP +Q KIF+ A E RK +V+TN
Sbjct: 293 ---RKINKEVGNLGDQVGPIKVVPLYSTLPPAMQQKIFDPAPEPVTEGGPPGRKIVVSTN 349
Query: 865 IAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCY 924
IAETSLT+DGI YVID G+ K KVYNP++ +++L V P+S C+
Sbjct: 350 IAETSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGRAGRTRPGKCF 409
Query: 925 RLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQ 984
RLYTE ++ N++ P PEI R+NL N V FDFMDPP E ++ ++
Sbjct: 410 RLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEV 469
Query: 985 LWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFR 1044
L LGAL++ G LT G M EFPLDP +AKML++ + C +E+L++ +MLSVP+ F R
Sbjct: 470 LNYLGALDDDGNLTKTGEIMSEFPLDPQMAKMLIVSPEFNCSNEILSVSAMLSVPNCFIR 529
Query: 1045 PKDRAEESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRS 1104
P++ + +D A+ +F E DHLTLL VY +K++ +WC E++++ ++++ A VR
Sbjct: 530 PREAQKAADEAKARFGHIEGDHLTLLNVYHAFKQNNEDPNWCYENFINNRAMKSADNVRQ 589
Query: 1105 QLLDILKTLKIPLTSS---GHDFDV-VRKAICSAYFHNAARLKGVGEYINCRNGMPCHLH 1160
QL+ I+ + + S+ D+ + +RKA+ + YF A L+ G Y+ ++ HLH
Sbjct: 590 QLVRIMSRFNLKMCSTDFNSRDYYINIRKAMLAGYFMQVAHLERTGHYLTVKDNQVVHLH 649
Query: 1161 PSSAIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFFSVKDSDTSMLEHK 1220
PS+ L + PE+V+Y+E +LT++ +++ T + +WL ++ ++ + S+ E K
Sbjct: 650 PSNC---LDHKPEWVIYNEYVLTSRNFIRTVTDIRGEWLVDVASHYYDL--SNFPNCEAK 704
Query: 1221 KKQKESKTAMEEEMENLRK 1239
+ ++ E E E +K
Sbjct: 705 RVIEKLYKKREREKEESKK 723
>FB|FBgn0033160 [details] [associations]
symbol:CG11107 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC;ISS] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AE013599
GO:GO:0005524 GO:GO:0022008 GO:GO:0003676 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0016779 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA EMBL:AY058484 RefSeq:NP_610269.1 UniGene:Dm.4189
SMR:Q7K3M5 STRING:Q7K3M5 EnsemblMetazoa:FBtr0088966 GeneID:35654
KEGG:dme:Dmel_CG11107 UCSC:CG11107-RA FlyBase:FBgn0033160
InParanoid:Q7K3M5 OrthoDB:EOG4D254T GenomeRNAi:35654 NextBio:794560
Uniprot:Q7K3M5
Length = 729
Score = 1394 (495.8 bits), Expect = 2.3e-144, Sum P(2) = 2.3e-144
Identities = 288/649 (44%), Positives = 414/649 (63%)
Query: 576 KTLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNGIVG- 634
+ L ++R LP+F + + ++++ +Q GETGSGKTTQ+ Q+ + D + G G
Sbjct: 63 QNLYKKRIALPVFEYQADFMRLLSLHQCIVLVGETGSGKTTQIPQWCV-DFAVSKGRKGV 121
Query: 635 -CTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKD 693
CTQPRRVAAMSVA+RVSEEMD +LG++VGY+IRFED + TL+KYMTDG+LLRE + D
Sbjct: 122 SCTQPRRVAAMSVAQRVSEEMDVKLGEEVGYSIRFEDCSTAKTLLKYMTDGMLLREAMSD 181
Query: 694 SDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVP 753
LD+Y+VI++DEAHER+L+TD+L G+LK+V+ +R D KL+V SATL+A KF +F + P
Sbjct: 182 PMLDQYQVILLDEAHERTLATDILMGVLKEVIRQRSDLKLVVMSATLDAGKFQQYFDNAP 241
Query: 754 IFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSP-PGDILIFMTGQDEIEAACFA 812
+ +PGRT PV Y+ P DY+EAA++ + IH+ GDIL+F+TGQ+EIE AC
Sbjct: 242 LMKVPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEIEGDILMFLTGQEEIEEACKR 301
Query: 813 LKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAK----EGT--RKCIVATNIA 866
+K ++ L S E+ EL +P+YS LP +LQ +IFE A G RK +V+TNIA
Sbjct: 302 IKREIDNLGS----EIGELKCIPLYSTLPPNLQQRIFEPAPPPNANGAIGRKVVVSTNIA 357
Query: 867 ETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRL 926
ETSLT+DG+ +VID G+ K KVYNP++ +++L V P+S C+RL
Sbjct: 358 ETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRSGRAGRTRPGKCFRL 417
Query: 927 YTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLW 986
YTE A+ NEM + PEI R+NLG VV FDFMDPP E ++ ++ L
Sbjct: 418 YTEKAFKNEMQDNTYPEILRSNLGTVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLN 477
Query: 987 VLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPK 1046
L AL++ G LTDLG M EFPLDP LAKML+ Q C +E+L+I +MLSVP F RP
Sbjct: 478 YLAALDDDGNLTDLGAVMSEFPLDPQLAKMLIASCQHNCSNEILSITAMLSVPQCFVRPN 537
Query: 1047 DRAEESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQL 1106
+ + +D A+ +F + DHLTLL VY +K+ +WC E++++ +SL+ A VR QL
Sbjct: 538 EAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQSSEDPNWCYENFINFRSLKSADNVRQQL 597
Query: 1107 LDILKTLKIPLTSS---GHDFDV-VRKAICSAYFHNAARLKGVGEYINCRNGMPCHLHPS 1162
I+ + TS+ D+ V +RKA+ +F A L+ G Y+ ++ LHPS
Sbjct: 598 ARIMDRFNLRRTSTEFTSKDYYVNIRKALVQGFFMQVAHLERTGYYLTIKDNQNVQLHPS 657
Query: 1163 SAIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFFSVKD 1211
+ L + P++V+Y+E +LTTK Y++ T V+P+WL L P ++ + +
Sbjct: 658 TC---LDHKPDWVIYNEFVLTTKNYIRTVTDVKPEWLCCLAPQYYDLNN 703
Score = 38 (18.4 bits), Expect = 2.3e-144, Sum P(2) = 2.3e-144
Identities = 8/11 (72%), Positives = 9/11 (81%)
Query: 27 GGLFVPNKERP 37
GG FVPNK+ P
Sbjct: 39 GG-FVPNKQPP 48
>DICTYBASE|DDB_G0285213 [details] [associations]
symbol:dhx15 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA;ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0285213 GO:GO:0005524
GenomeReviews:CM000153_GR GO:GO:0008380 GO:GO:0006397 GO:GO:0005681
GO:GO:0003676 EMBL:AAFI02000076 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 KO:K12820 OMA:TVLQIHA RefSeq:XP_638323.1
ProteinModelPortal:Q54NJ4 EnsemblProtists:DDB0233403 GeneID:8624993
KEGG:ddi:DDB_G0285213 Uniprot:Q54NJ4
Length = 727
Score = 1391 (494.7 bits), Expect = 2.9e-142, P = 2.9e-142
Identities = 281/664 (42%), Positives = 419/664 (63%)
Query: 552 DFREDAKFSQHMKKGEAVSDFAKSKTLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETG 611
+ + + Q + K E S + + E+R+ LP++ +++ ++VI+ENQ GETG
Sbjct: 46 NIKSNLTIDQWIPKKETFSK--RYYEILEKRKELPVWKQKEDFIKVIKENQVVILVGETG 103
Query: 612 SGKTTQLTQYLLEDGYTTNG-IVGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFED 670
SGKTTQ+ Q++++ G G +VG TQPRRVAA+SVAKRVSEEMD ELG++VGY+IRFE+
Sbjct: 104 SGKTTQIPQFVVDAGLIRPGKMVGVTQPRRVAAISVAKRVSEEMDFELGEEVGYSIRFEE 163
Query: 671 VTGPSTLIKYMTDGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRD 730
++ T +KY+TDG+LLRE++ D L+KY VI++DEAHER+LSTD+LFG++K ++ RR+D
Sbjct: 164 LSSARTFMKYLTDGMLLRESMSDPTLNKYDVIILDEAHERTLSTDILFGLIKDILKRRKD 223
Query: 731 FKLIVTSATLNAQKFSDFFGSVPIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHIT 790
KLIV SATL A KF +F + P+ +PGR PV Y++ +DY+E+AV+ + IH
Sbjct: 224 LKLIVMSATLEAGKFQKYFENAPLIKVPGRLHPVEIFYTEEAAKDYLESAVRTVIDIHTN 283
Query: 791 SPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFE 850
GDIL+F+TG++EIE C ++ + R +P + LP+YS LP Q+KIF+
Sbjct: 284 EGTGDILVFLTGEEEIEDTCAKIQRETRE------RGLPPMKTLPLYSSLPIYQQSKIFD 337
Query: 851 KAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXX 910
KE RKCIV+TNIAETSLT+DGI +V+D G+ K K YNP+ +++L V P+S
Sbjct: 338 TCKE--RKCIVSTNIAETSLTIDGIVFVVDPGFSKQKTYNPRSRVESLLVAPISKASANQ 395
Query: 911 XXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFM 970
C+RLYTE A+ M+ PEI R+NL +VV FDFM
Sbjct: 396 RAGRAGRTRPGKCFRLYTEKAFKELMIQQTHPEILRSNLASVVLQLLKLGVVDLVHFDFM 455
Query: 971 DPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVL 1030
DPP + ++ ++ L LGAL++ G LT++G M EFPLDP L+KML++ + C +E+L
Sbjct: 456 DPPVPDTLIRALEVLHYLGALDDEGQLTEIGSIMSEFPLDPQLSKMLIVSAERSCSNEIL 515
Query: 1031 TIVSMLSVPSVFFRPKDRAEESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHY 1090
TI +MLS P+ F RPKD E+D+A++ F + DHLT+L VY +K++ WC +++
Sbjct: 516 TIAAMLSAPNCFMRPKDNRIEADSAKKSFDHFDGDHLTMLNVYHSFKKNGEDPTWCYDNF 575
Query: 1091 LHVKSLRKAREVRSQLLDILKTLKIPLTS----SGHDFDVVRKAICSAYFHNAARLKGVG 1146
L+ +++++A VRSQL IL K+PL S S ++ ++K I + +F A+ +
Sbjct: 576 LNHRAIKQADSVRSQLARILTRFKLPLVSGDVNSKFYYENIKKCIAAGFFMQVAKCEKKN 635
Query: 1147 EYINCRNGMPCHLHPSSAIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMF 1206
Y + HPS+ GL PE+ +Y+E +LT++ Y++ T V+ WL EL P +
Sbjct: 636 IYFTLGDEQSVIFHPST---GLTRRPEFCIYNEFVLTSENYIRTITDVKFDWLLELAPSY 692
Query: 1207 FSVK 1210
F K
Sbjct: 693 FKQK 696
>MGI|MGI:1099786 [details] [associations]
symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box polypeptide 15"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005689 "U12-type spliceosomal complex" evidence=ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
MGI:MGI:1099786 GO:GO:0005524 GO:GO:0005730 GO:GO:0008380
GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820 OMA:TVLQIHA CTD:1665
HOVERGEN:HBG039428 OrthoDB:EOG4K6G3N GO:GO:0005689 EMBL:AF017153
EMBL:BC003745 IPI:IPI00128818 RefSeq:NP_031865.2 UniGene:Mm.993
ProteinModelPortal:O35286 SMR:O35286 STRING:O35286
PhosphoSite:O35286 PaxDb:O35286 PRIDE:O35286
Ensembl:ENSMUST00000031061 GeneID:13204 KEGG:mmu:13204
InParanoid:O35286 NextBio:283358 Bgee:O35286 CleanEx:MM_DHX15
Genevestigator:O35286 GermOnline:ENSMUSG00000029169 Uniprot:O35286
Length = 795
Score = 1360 (483.8 bits), Expect = 1.0e-141, Sum P(2) = 1.0e-141
Identities = 277/648 (42%), Positives = 406/648 (62%)
Query: 578 LAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNGI---VG 634
+ ++R LP++ +D ++ +Q GETGSGKTTQ+ Q+ +E + G V
Sbjct: 130 ILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVA 189
Query: 635 CTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDS 694
CTQPRRVAAMSVA+RV++EMD LG +VGY+IRFED + T++KYMTDG+LLRE + D
Sbjct: 190 CTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDP 249
Query: 695 DLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPI 754
L++Y VI++DEAHER+L+TD+L G+LK+VV +R D K+IV SATL+A KF +F + P+
Sbjct: 250 LLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPL 309
Query: 755 FHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPP-GDILIFMTGQDEIEAACFAL 813
IPGRT PV Y+ P DY+EAA++ + IH+ GD+L+F+TGQ+EI+ AC +
Sbjct: 310 LTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRI 369
Query: 814 KERMEQLISSTTREVPELLILPIYSQLPADLQAKIFE----KAKEGT--RKCIVATNIAE 867
K ++ L EV ++ I+P+YS LP Q +IFE K + G RK +V+TNIAE
Sbjct: 370 KREVDDL----GPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAE 425
Query: 868 TSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLY 927
TSLT+DG+ +VID G+ K KVYNP++ +++L V +S C+RLY
Sbjct: 426 TSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLY 485
Query: 928 TESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWV 987
TE AY EM + PEI R+NLG+VV FDFMDPP E ++ ++ L
Sbjct: 486 TEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNY 545
Query: 988 LGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKD 1047
L ALN+ G LT+LG M EFPLDP LAKM++ C +EVL+I +MLSVP F RP +
Sbjct: 546 LAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQCFVRPTE 605
Query: 1048 RAEESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQLL 1107
+ +D A+ +F + DHLTLL VY +K++ WC +++++ +SL A VR QL
Sbjct: 606 AKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLS 665
Query: 1108 DILKTLKIPLTSS---GHDFDV-VRKAICSAYFHNAARLKGVGEYINCRNGMPCHLHPSS 1163
I+ +P S+ D+ + +RKA+ + YF A L+ G Y+ ++ LHPS+
Sbjct: 666 RIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVKDNQVVQLHPST 725
Query: 1164 AIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFFSVKD 1211
L + PE+V+Y+E +LTTK Y++ T ++P+WL ++ P ++ + +
Sbjct: 726 V---LDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSN 770
Score = 47 (21.6 bits), Expect = 1.0e-141, Sum P(2) = 1.0e-141
Identities = 19/60 (31%), Positives = 29/60 (48%)
Query: 162 RHDRDDRGSERKYLKDDTRSESRGPSRRDNYDSKGRYRGREARDRDEPEYGGEYGRKRSK 221
RH R D G + Y R+ + G R + D + R + R+ R+RD G+ R+R K
Sbjct: 4 RH-RLDLGED--YPSGKKRAGTDGKDRERDRDREDRSKDRD-RERDR----GDREREREK 55
Score = 40 (19.1 bits), Expect = 5.6e-141, Sum P(2) = 5.6e-141
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 186 PSRRDNYDSKGRYRGREARDRDEPEYGGEYGRKRSKYDGTR 226
PS + + G+ RE RDRD + + R+R + D R
Sbjct: 14 PSGKKRAGTDGK--DRE-RDRDREDRSKDRDRERDRGDRER 51
>RGD|1308072 [details] [associations]
symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box polypeptide 15"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005689 "U12-type
spliceosomal complex" evidence=IEA;ISO] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 RGD:1308072 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA CTD:1665 OrthoDB:EOG4K6G3N GO:GO:0005689 EMBL:CH473963
IPI:IPI00361832 RefSeq:NP_001178526.1 UniGene:Rn.55597
Ensembl:ENSRNOT00000005126 GeneID:289693 KEGG:rno:289693
NextBio:630162 Uniprot:D3ZD97
Length = 795
Score = 1360 (483.8 bits), Expect = 1.0e-141, Sum P(2) = 1.0e-141
Identities = 277/648 (42%), Positives = 406/648 (62%)
Query: 578 LAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNGI---VG 634
+ ++R LP++ +D ++ +Q GETGSGKTTQ+ Q+ +E + G V
Sbjct: 130 ILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVA 189
Query: 635 CTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDS 694
CTQPRRVAAMSVA+RV++EMD LG +VGY+IRFED + T++KYMTDG+LLRE + D
Sbjct: 190 CTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDP 249
Query: 695 DLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPI 754
L++Y VI++DEAHER+L+TD+L G+LK+VV +R D K+IV SATL+A KF +F + P+
Sbjct: 250 LLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPL 309
Query: 755 FHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPP-GDILIFMTGQDEIEAACFAL 813
IPGRT PV Y+ P DY+EAA++ + IH+ GD+L+F+TGQ+EI+ AC +
Sbjct: 310 LTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRI 369
Query: 814 KERMEQLISSTTREVPELLILPIYSQLPADLQAKIFE----KAKEGT--RKCIVATNIAE 867
K ++ L EV ++ I+P+YS LP Q +IFE K + G RK +V+TNIAE
Sbjct: 370 KREVDDL----GPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAE 425
Query: 868 TSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLY 927
TSLT+DG+ +VID G+ K KVYNP++ +++L V +S C+RLY
Sbjct: 426 TSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLY 485
Query: 928 TESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWV 987
TE AY EM + PEI R+NLG+VV FDFMDPP E ++ ++ L
Sbjct: 486 TEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNY 545
Query: 988 LGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKD 1047
L ALN+ G LT+LG M EFPLDP LAKM++ C +EVL+I +MLSVP F RP +
Sbjct: 546 LAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQCFVRPTE 605
Query: 1048 RAEESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQLL 1107
+ +D A+ +F + DHLTLL VY +K++ WC +++++ +SL A VR QL
Sbjct: 606 AKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLS 665
Query: 1108 DILKTLKIPLTSS---GHDFDV-VRKAICSAYFHNAARLKGVGEYINCRNGMPCHLHPSS 1163
I+ +P S+ D+ + +RKA+ + YF A L+ G Y+ ++ LHPS+
Sbjct: 666 RIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVKDNQVVQLHPST 725
Query: 1164 AIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFFSVKD 1211
L + PE+V+Y+E +LTTK Y++ T ++P+WL ++ P ++ + +
Sbjct: 726 V---LDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSN 770
Score = 47 (21.6 bits), Expect = 1.0e-141, Sum P(2) = 1.0e-141
Identities = 19/60 (31%), Positives = 29/60 (48%)
Query: 162 RHDRDDRGSERKYLKDDTRSESRGPSRRDNYDSKGRYRGREARDRDEPEYGGEYGRKRSK 221
RH R D G + Y R+ + G R + D + R + R+ R+RD G+ R+R K
Sbjct: 4 RH-RLDLGED--YPSGKKRAGTDGKDRERDRDREDRSKDRD-RERDR----GDREREREK 55
Score = 40 (19.1 bits), Expect = 5.6e-141, Sum P(2) = 5.6e-141
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 186 PSRRDNYDSKGRYRGREARDRDEPEYGGEYGRKRSKYDGTR 226
PS + + G+ RE RDRD + + R+R + D R
Sbjct: 14 PSGKKRAGTDGK--DRE-RDRDREDRSKDRDRERDRGDRER 51
>WB|WBGene00018967 [details] [associations]
symbol:F56D2.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0016246 "RNA interference" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0040020
"regulation of meiosis" evidence=IMP] [GO:0040022 "feminization of
hermaphroditic germ-line" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0016246
GO:GO:0008380 GO:GO:0006397 GO:GO:0040011 GO:GO:0003676
GO:GO:0042127 GO:GO:0040035 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0040022 HOGENOM:HOG000175261 EMBL:FO080358
KO:K12820 PIR:T16482 RefSeq:NP_741147.1 ProteinModelPortal:Q20875
SMR:Q20875 STRING:Q20875 PaxDb:Q20875 PRIDE:Q20875
EnsemblMetazoa:F56D2.6a.1 EnsemblMetazoa:F56D2.6a.2 GeneID:175771
KEGG:cel:CELE_F56D2.6 UCSC:F56D2.6a CTD:175771 WormBase:F56D2.6a
GeneTree:ENSGT00650000093246 InParanoid:Q20875 OMA:TVLQIHA
NextBio:889592 ArrayExpress:Q20875 Uniprot:Q20875
Length = 739
Score = 1352 (481.0 bits), Expect = 1.0e-141, Sum P(2) = 1.0e-141
Identities = 271/657 (41%), Positives = 411/657 (62%)
Query: 580 EQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLE------DGYTTNG-- 631
E+R LP++ +++ ++++R NQ GETGSGKTTQ+ Q+ +E G
Sbjct: 71 EKRSQLPVWEYKEKFMELLRNNQCITLVGETGSGKTTQIPQWAVEFMKQQQQGQPPGQAR 130
Query: 632 IVGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETL 691
+V CTQPRRVAAMSVA RV+EEMD LG +VGY+IRFED T++KY TDG+LLRE +
Sbjct: 131 LVACTQPRRVAAMSVATRVAEEMDVVLGQEVGYSIRFEDCISERTVLKYCTDGMLLREAM 190
Query: 692 KDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGS 751
LDKY+V+++DEAHER+L+TD+L G++K++V R D K+++ SATL+A KF +F
Sbjct: 191 NSPLLDKYKVLILDEAHERTLATDILMGLIKEIVRNRADIKVVIMSATLDAGKFQRYFED 250
Query: 752 VPIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSP-PGDILIFMTGQDEIEAAC 810
P+ +PGRTFPV ++ +DY+EAA++ + IH+ GDIL+F+TGQ+EIE AC
Sbjct: 251 CPLLSVPGRTFPVEIFFTPNAEKDYLEAAIRTVIQIHMVEEVEGDILLFLTGQEEIEEAC 310
Query: 811 FALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEG------TRKCIVATN 864
+R+++ I + + L +P+YS LP Q +IFE A +RKC+++TN
Sbjct: 311 ----KRIDREIQALGADAGALSCIPLYSTLPPAAQQRIFEPAPPNRPNGAISRKCVISTN 366
Query: 865 IAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCY 924
IAETSLT+DG+ +VID G+ K KVYNP++ +++L V P+S C+
Sbjct: 367 IAETSLTIDGVVFVIDPGFSKQKVYNPRIRVESLLVCPISKASAMQRAGRAGRTKPGKCF 426
Query: 925 RLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQ 984
RLYTE+AY +EM PEI R+NLG+VV FDFMDPP E ++ ++
Sbjct: 427 RLYTETAYGSEMQDQTYPEILRSNLGSVVLQLKKLGTEDLVHFDFMDPPAPETLMRALEL 486
Query: 985 LWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFR 1044
L L A+N+ G LT+LG M EFPLDP LAKML+ +L C +E+L+I +MLSVP + R
Sbjct: 487 LNYLQAINDDGELTELGSLMAEFPLDPQLAKMLITSTELNCSNEILSITAMLSVPQCWVR 546
Query: 1045 PKDRAEESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRS 1104
P + E+D A+ +F + DHLTLL VY +K++Q WC +++++ ++++ A VR+
Sbjct: 547 PNEMRTEADEAKARFAHIDGDHLTLLNVYHSFKQNQEDPQWCYDNFINYRTMKTADTVRT 606
Query: 1105 QLLDILKTLKIPLTSS---GHDFDV-VRKAICSAYFHNAARLKGVGEYINCRNGMPCHLH 1160
QL ++ + S+ D+ + +RKA+ + +F A L+ G Y+ ++ +LH
Sbjct: 607 QLSRVMDKYNLRRVSTDFKSRDYYLNIRKALVAGFFMQVAHLERSGHYVTVKDNQLVNLH 666
Query: 1161 PSSAIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFFSVK---DSDT 1214
PS+ L + PE+ +Y+E +LTTK +++ T V P+WL ++ P ++ + D DT
Sbjct: 667 PSTV---LDHKPEWALYNEFVLTTKNFIRTVTDVRPEWLLQIAPQYYDLDNFPDGDT 720
Score = 55 (24.4 bits), Expect = 1.0e-141, Sum P(2) = 1.0e-141
Identities = 13/32 (40%), Positives = 16/32 (50%)
Query: 164 DRDDRGSERKYLKDDTRSESRGPSRRDNYDSK 195
D RG R+ +RS SR P RR + D K
Sbjct: 10 DGSGRGDRRRSPNRRSRSRSRSPHRRSSPDRK 41
>UNIPROTKB|Q20875 [details] [associations]
symbol:F56D2.6 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase F56D2.6" species:6239 "Caenorhabditis
elegans" [GO:0030686 "90S preribosome" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] [GO:0006364 "rRNA processing"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0016246
GO:GO:0008380 GO:GO:0006397 GO:GO:0040011 GO:GO:0003676
GO:GO:0042127 GO:GO:0040035 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0040022 HOGENOM:HOG000175261 EMBL:FO080358
KO:K12820 PIR:T16482 RefSeq:NP_741147.1 ProteinModelPortal:Q20875
SMR:Q20875 STRING:Q20875 PaxDb:Q20875 PRIDE:Q20875
EnsemblMetazoa:F56D2.6a.1 EnsemblMetazoa:F56D2.6a.2 GeneID:175771
KEGG:cel:CELE_F56D2.6 UCSC:F56D2.6a CTD:175771 WormBase:F56D2.6a
GeneTree:ENSGT00650000093246 InParanoid:Q20875 OMA:TVLQIHA
NextBio:889592 ArrayExpress:Q20875 Uniprot:Q20875
Length = 739
Score = 1352 (481.0 bits), Expect = 1.0e-141, Sum P(2) = 1.0e-141
Identities = 271/657 (41%), Positives = 411/657 (62%)
Query: 580 EQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLE------DGYTTNG-- 631
E+R LP++ +++ ++++R NQ GETGSGKTTQ+ Q+ +E G
Sbjct: 71 EKRSQLPVWEYKEKFMELLRNNQCITLVGETGSGKTTQIPQWAVEFMKQQQQGQPPGQAR 130
Query: 632 IVGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETL 691
+V CTQPRRVAAMSVA RV+EEMD LG +VGY+IRFED T++KY TDG+LLRE +
Sbjct: 131 LVACTQPRRVAAMSVATRVAEEMDVVLGQEVGYSIRFEDCISERTVLKYCTDGMLLREAM 190
Query: 692 KDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGS 751
LDKY+V+++DEAHER+L+TD+L G++K++V R D K+++ SATL+A KF +F
Sbjct: 191 NSPLLDKYKVLILDEAHERTLATDILMGLIKEIVRNRADIKVVIMSATLDAGKFQRYFED 250
Query: 752 VPIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSP-PGDILIFMTGQDEIEAAC 810
P+ +PGRTFPV ++ +DY+EAA++ + IH+ GDIL+F+TGQ+EIE AC
Sbjct: 251 CPLLSVPGRTFPVEIFFTPNAEKDYLEAAIRTVIQIHMVEEVEGDILLFLTGQEEIEEAC 310
Query: 811 FALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEG------TRKCIVATN 864
+R+++ I + + L +P+YS LP Q +IFE A +RKC+++TN
Sbjct: 311 ----KRIDREIQALGADAGALSCIPLYSTLPPAAQQRIFEPAPPNRPNGAISRKCVISTN 366
Query: 865 IAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCY 924
IAETSLT+DG+ +VID G+ K KVYNP++ +++L V P+S C+
Sbjct: 367 IAETSLTIDGVVFVIDPGFSKQKVYNPRIRVESLLVCPISKASAMQRAGRAGRTKPGKCF 426
Query: 925 RLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQ 984
RLYTE+AY +EM PEI R+NLG+VV FDFMDPP E ++ ++
Sbjct: 427 RLYTETAYGSEMQDQTYPEILRSNLGSVVLQLKKLGTEDLVHFDFMDPPAPETLMRALEL 486
Query: 985 LWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFR 1044
L L A+N+ G LT+LG M EFPLDP LAKML+ +L C +E+L+I +MLSVP + R
Sbjct: 487 LNYLQAINDDGELTELGSLMAEFPLDPQLAKMLITSTELNCSNEILSITAMLSVPQCWVR 546
Query: 1045 PKDRAEESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRS 1104
P + E+D A+ +F + DHLTLL VY +K++Q WC +++++ ++++ A VR+
Sbjct: 547 PNEMRTEADEAKARFAHIDGDHLTLLNVYHSFKQNQEDPQWCYDNFINYRTMKTADTVRT 606
Query: 1105 QLLDILKTLKIPLTSS---GHDFDV-VRKAICSAYFHNAARLKGVGEYINCRNGMPCHLH 1160
QL ++ + S+ D+ + +RKA+ + +F A L+ G Y+ ++ +LH
Sbjct: 607 QLSRVMDKYNLRRVSTDFKSRDYYLNIRKALVAGFFMQVAHLERSGHYVTVKDNQLVNLH 666
Query: 1161 PSSAIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFFSVK---DSDT 1214
PS+ L + PE+ +Y+E +LTTK +++ T V P+WL ++ P ++ + D DT
Sbjct: 667 PSTV---LDHKPEWALYNEFVLTTKNFIRTVTDVRPEWLLQIAPQYYDLDNFPDGDT 720
Score = 55 (24.4 bits), Expect = 1.0e-141, Sum P(2) = 1.0e-141
Identities = 13/32 (40%), Positives = 16/32 (50%)
Query: 164 DRDDRGSERKYLKDDTRSESRGPSRRDNYDSK 195
D RG R+ +RS SR P RR + D K
Sbjct: 10 DGSGRGDRRRSPNRRSRSRSRSPHRRSSPDRK 41
>UNIPROTKB|E2R2U3 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005689 "U12-type spliceosomal complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
CTD:1665 GO:GO:0005689 EMBL:AAEX03002593 EMBL:AAEX03002594
RefSeq:XP_851535.1 Ensembl:ENSCAFT00000026155 GeneID:488856
KEGG:cfa:488856 NextBio:20862139 Uniprot:E2R2U3
Length = 795
Score = 1360 (483.8 bits), Expect = 1.3e-141, Sum P(2) = 1.3e-141
Identities = 277/648 (42%), Positives = 406/648 (62%)
Query: 578 LAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNGI---VG 634
+ ++R LP++ +D ++ +Q GETGSGKTTQ+ Q+ +E + G V
Sbjct: 130 ILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVA 189
Query: 635 CTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDS 694
CTQPRRVAAMSVA+RV++EMD LG +VGY+IRFED + T++KYMTDG+LLRE + D
Sbjct: 190 CTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDP 249
Query: 695 DLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPI 754
L++Y VI++DEAHER+L+TD+L G+LK+VV +R D K+IV SATL+A KF +F + P+
Sbjct: 250 LLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPL 309
Query: 755 FHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPP-GDILIFMTGQDEIEAACFAL 813
IPGRT PV Y+ P DY+EAA++ + IH+ GD+L+F+TGQ+EI+ AC +
Sbjct: 310 LTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRI 369
Query: 814 KERMEQLISSTTREVPELLILPIYSQLPADLQAKIFE----KAKEGT--RKCIVATNIAE 867
K ++ L EV ++ I+P+YS LP Q +IFE K + G RK +V+TNIAE
Sbjct: 370 KREVDDL----GPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAE 425
Query: 868 TSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLY 927
TSLT+DG+ +VID G+ K KVYNP++ +++L V +S C+RLY
Sbjct: 426 TSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLY 485
Query: 928 TESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWV 987
TE AY EM + PEI R+NLG+VV FDFMDPP E ++ ++ L
Sbjct: 486 TEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNY 545
Query: 988 LGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKD 1047
L ALN+ G LT+LG M EFPLDP LAKM++ C +EVL+I +MLSVP F RP +
Sbjct: 546 LAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQCFVRPTE 605
Query: 1048 RAEESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQLL 1107
+ +D A+ +F + DHLTLL VY +K++ WC +++++ +SL A VR QL
Sbjct: 606 AKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLS 665
Query: 1108 DILKTLKIPLTSS---GHDFDV-VRKAICSAYFHNAARLKGVGEYINCRNGMPCHLHPSS 1163
I+ +P S+ D+ + +RKA+ + YF A L+ G Y+ ++ LHPS+
Sbjct: 666 RIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVKDNQVVQLHPST 725
Query: 1164 AIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFFSVKD 1211
L + PE+V+Y+E +LTTK Y++ T ++P+WL ++ P ++ + +
Sbjct: 726 V---LDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSN 770
Score = 46 (21.3 bits), Expect = 1.3e-141, Sum P(2) = 1.3e-141
Identities = 12/42 (28%), Positives = 18/42 (42%)
Query: 166 DDRGSERKYLKDDTRSESRGPSRRDNYDSKGRYRGREARDRD 207
+D S +K D + R R D + R R R R+R+
Sbjct: 11 EDYPSGKKRAGTDGKDRDRDRDREDRSKDRDRERDRGDRERE 52
Score = 46 (21.3 bits), Expect = 1.3e-141, Sum P(2) = 1.3e-141
Identities = 14/48 (29%), Positives = 21/48 (43%)
Query: 178 DTRSESRGPSRRDNYDSKGRYRGRE----ARDRDEPEYGGEYGRKRSK 221
D + +R D K R R R+ ++DRD G+ R+R K
Sbjct: 8 DLEEDYPSGKKRAGTDGKDRDRDRDREDRSKDRDRERDRGDREREREK 55
Score = 42 (19.8 bits), Expect = 3.4e-141, Sum P(2) = 3.4e-141
Identities = 13/33 (39%), Positives = 15/33 (45%)
Query: 164 DRD-DRGSERKYLKDDTRSESRGPSRRDNYDSK 195
DRD DR E + KD R RG R+ K
Sbjct: 26 DRDRDRDREDRS-KDRDRERDRGDREREREKEK 57
Score = 39 (18.8 bits), Expect = 7.1e-141, Sum P(2) = 7.1e-141
Identities = 12/41 (29%), Positives = 19/41 (46%)
Query: 186 PSRRDNYDSKGRYRGREARDRDEPEYGGEYGRKRSKYDGTR 226
PS + + G+ R R DRD + + R+R + D R
Sbjct: 14 PSGKKRAGTDGKDRDR---DRDREDRSKDRDRERDRGDRER 51
>UNIPROTKB|A5D7D9 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005689 "U12-type spliceosomal complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820
GeneTree:ENSGT00650000093246 OMA:TVLQIHA CTD:1665
HOVERGEN:HBG039428 OrthoDB:EOG4K6G3N GO:GO:0005689
EMBL:DAAA02017121 EMBL:BC140520 IPI:IPI00709068
RefSeq:NP_001091487.1 UniGene:Bt.58909 Ensembl:ENSBTAT00000011714
GeneID:512327 KEGG:bta:512327 InParanoid:A5D7D9 NextBio:20870343
Uniprot:A5D7D9
Length = 795
Score = 1360 (483.8 bits), Expect = 1.3e-141, Sum P(2) = 1.3e-141
Identities = 277/648 (42%), Positives = 406/648 (62%)
Query: 578 LAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNGI---VG 634
+ ++R LP++ +D ++ +Q GETGSGKTTQ+ Q+ +E + G V
Sbjct: 130 ILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVA 189
Query: 635 CTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDS 694
CTQPRRVAAMSVA+RV++EMD LG +VGY+IRFED + T++KYMTDG+LLRE + D
Sbjct: 190 CTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDP 249
Query: 695 DLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPI 754
L++Y VI++DEAHER+L+TD+L G+LK+VV +R D K+IV SATL+A KF +F + P+
Sbjct: 250 LLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPL 309
Query: 755 FHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPP-GDILIFMTGQDEIEAACFAL 813
IPGRT PV Y+ P DY+EAA++ + IH+ GD+L+F+TGQ+EI+ AC +
Sbjct: 310 LTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRI 369
Query: 814 KERMEQLISSTTREVPELLILPIYSQLPADLQAKIFE----KAKEGT--RKCIVATNIAE 867
K ++ L EV ++ I+P+YS LP Q +IFE K + G RK +V+TNIAE
Sbjct: 370 KREVDDL----GPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAE 425
Query: 868 TSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLY 927
TSLT+DG+ +VID G+ K KVYNP++ +++L V +S C+RLY
Sbjct: 426 TSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLY 485
Query: 928 TESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWV 987
TE AY EM + PEI R+NLG+VV FDFMDPP E ++ ++ L
Sbjct: 486 TEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNY 545
Query: 988 LGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKD 1047
L ALN+ G LT+LG M EFPLDP LAKM++ C +EVL+I +MLSVP F RP +
Sbjct: 546 LAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQCFVRPTE 605
Query: 1048 RAEESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQLL 1107
+ +D A+ +F + DHLTLL VY +K++ WC +++++ +SL A VR QL
Sbjct: 606 AKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLS 665
Query: 1108 DILKTLKIPLTSS---GHDFDV-VRKAICSAYFHNAARLKGVGEYINCRNGMPCHLHPSS 1163
I+ +P S+ D+ + +RKA+ + YF A L+ G Y+ ++ LHPS+
Sbjct: 666 RIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVKDNQVVQLHPST 725
Query: 1164 AIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFFSVKD 1211
L + PE+V+Y+E +LTTK Y++ T ++P+WL ++ P ++ + +
Sbjct: 726 V---LDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSN 770
Score = 46 (21.3 bits), Expect = 1.3e-141, Sum P(2) = 1.3e-141
Identities = 12/42 (28%), Positives = 18/42 (42%)
Query: 166 DDRGSERKYLKDDTRSESRGPSRRDNYDSKGRYRGREARDRD 207
+D S +K D + R R D + R R R R+R+
Sbjct: 11 EDYPSGKKRAGTDGKDRDRDRDREDRSKDRDRERDRGDRERE 52
Score = 45 (20.9 bits), Expect = 1.7e-141, Sum P(2) = 1.7e-141
Identities = 13/38 (34%), Positives = 19/38 (50%)
Query: 188 RRDNYDSKGRYRGRE----ARDRDEPEYGGEYGRKRSK 221
+R D K R R R+ ++DRD G+ R+R K
Sbjct: 18 KRAGTDGKDRDRDRDREDRSKDRDRERDRGDREREREK 55
Score = 42 (19.8 bits), Expect = 3.4e-141, Sum P(2) = 3.4e-141
Identities = 13/33 (39%), Positives = 15/33 (45%)
Query: 164 DRD-DRGSERKYLKDDTRSESRGPSRRDNYDSK 195
DRD DR E + KD R RG R+ K
Sbjct: 26 DRDRDRDREDRS-KDRDRERDRGDREREREKEK 57
Score = 39 (18.8 bits), Expect = 7.1e-141, Sum P(2) = 7.1e-141
Identities = 12/41 (29%), Positives = 19/41 (46%)
Query: 186 PSRRDNYDSKGRYRGREARDRDEPEYGGEYGRKRSKYDGTR 226
PS + + G+ R R DRD + + R+R + D R
Sbjct: 14 PSGKKRAGTDGKDRDR---DRDREDRSKDRDRERDRGDRER 51
>UNIPROTKB|O43143 [details] [associations]
symbol:DHX15 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX15" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=TAS] [GO:0008380 "RNA splicing" evidence=IC]
[GO:0005689 "U12-type spliceosomal complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 EMBL:AB001636 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 GO:GO:0003724
KO:K12820 OMA:TVLQIHA EMBL:AF279891 EMBL:BC035974 IPI:IPI00396435
PIR:JC5785 RefSeq:NP_001349.2 UniGene:Hs.696074
ProteinModelPortal:O43143 SMR:O43143 DIP:DIP-38211N IntAct:O43143
MINT:MINT-5003827 STRING:O43143 PhosphoSite:O43143
SWISS-2DPAGE:O43143 PaxDb:O43143 PRIDE:O43143
Ensembl:ENST00000336812 GeneID:1665 KEGG:hsa:1665 UCSC:uc003gqx.3
CTD:1665 GeneCards:GC04M024519 HGNC:HGNC:2738 HPA:HPA047047
MIM:603403 neXtProt:NX_O43143 PharmGKB:PA27204 HOVERGEN:HBG039428
InParanoid:O43143 OrthoDB:EOG4K6G3N GenomeRNAi:1665 NextBio:6852
ArrayExpress:O43143 Bgee:O43143 CleanEx:HS_DHX15
Genevestigator:O43143 GermOnline:ENSG00000109606 GO:GO:0005689
Uniprot:O43143
Length = 795
Score = 1360 (483.8 bits), Expect = 1.3e-141, Sum P(2) = 1.3e-141
Identities = 277/648 (42%), Positives = 406/648 (62%)
Query: 578 LAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNGI---VG 634
+ ++R LP++ +D ++ +Q GETGSGKTTQ+ Q+ +E + G V
Sbjct: 130 ILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVA 189
Query: 635 CTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDS 694
CTQPRRVAAMSVA+RV++EMD LG +VGY+IRFED + T++KYMTDG+LLRE + D
Sbjct: 190 CTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDP 249
Query: 695 DLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPI 754
L++Y VI++DEAHER+L+TD+L G+LK+VV +R D K+IV SATL+A KF +F + P+
Sbjct: 250 LLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPL 309
Query: 755 FHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPP-GDILIFMTGQDEIEAACFAL 813
IPGRT PV Y+ P DY+EAA++ + IH+ GD+L+F+TGQ+EI+ AC +
Sbjct: 310 LTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRI 369
Query: 814 KERMEQLISSTTREVPELLILPIYSQLPADLQAKIFE----KAKEGT--RKCIVATNIAE 867
K ++ L EV ++ I+P+YS LP Q +IFE K + G RK +V+TNIAE
Sbjct: 370 KREVDDL----GPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAE 425
Query: 868 TSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLY 927
TSLT+DG+ +VID G+ K KVYNP++ +++L V +S C+RLY
Sbjct: 426 TSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLY 485
Query: 928 TESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWV 987
TE AY EM + PEI R+NLG+VV FDFMDPP E ++ ++ L
Sbjct: 486 TEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNY 545
Query: 988 LGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKD 1047
L ALN+ G LT+LG M EFPLDP LAKM++ C +EVL+I +MLSVP F RP +
Sbjct: 546 LAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQCFVRPTE 605
Query: 1048 RAEESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQLL 1107
+ +D A+ +F + DHLTLL VY +K++ WC +++++ +SL A VR QL
Sbjct: 606 AKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLS 665
Query: 1108 DILKTLKIPLTSS---GHDFDV-VRKAICSAYFHNAARLKGVGEYINCRNGMPCHLHPSS 1163
I+ +P S+ D+ + +RKA+ + YF A L+ G Y+ ++ LHPS+
Sbjct: 666 RIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVKDNQVVQLHPST 725
Query: 1164 AIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFFSVKD 1211
L + PE+V+Y+E +LTTK Y++ T ++P+WL ++ P ++ + +
Sbjct: 726 V---LDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSN 770
Score = 46 (21.3 bits), Expect = 1.3e-141, Sum P(2) = 1.3e-141
Identities = 12/42 (28%), Positives = 18/42 (42%)
Query: 166 DDRGSERKYLKDDTRSESRGPSRRDNYDSKGRYRGREARDRD 207
+D S +K D + R R D + R R R R+R+
Sbjct: 11 EDYPSGKKRAGTDGKDRDRDRDREDRSKDRDRERDRGDRERE 52
Score = 45 (20.9 bits), Expect = 1.7e-141, Sum P(2) = 1.7e-141
Identities = 13/38 (34%), Positives = 19/38 (50%)
Query: 188 RRDNYDSKGRYRGRE----ARDRDEPEYGGEYGRKRSK 221
+R D K R R R+ ++DRD G+ R+R K
Sbjct: 18 KRAGTDGKDRDRDRDREDRSKDRDRERDRGDREREREK 55
Score = 42 (19.8 bits), Expect = 3.4e-141, Sum P(2) = 3.4e-141
Identities = 13/33 (39%), Positives = 15/33 (45%)
Query: 164 DRD-DRGSERKYLKDDTRSESRGPSRRDNYDSK 195
DRD DR E + KD R RG R+ K
Sbjct: 26 DRDRDRDREDRS-KDRDRERDRGDREREREKEK 57
Score = 39 (18.8 bits), Expect = 7.1e-141, Sum P(2) = 7.1e-141
Identities = 12/41 (29%), Positives = 19/41 (46%)
Query: 186 PSRRDNYDSKGRYRGREARDRDEPEYGGEYGRKRSKYDGTR 226
PS + + G+ R R DRD + + R+R + D R
Sbjct: 14 PSGKKRAGTDGKDRDR---DRDREDRSKDRDRERDRGDRER 51
>UNIPROTKB|F1S5A8 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005689 "U12-type spliceosomal complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00650000093246 OMA:TVLQIHA GO:GO:0005689
EMBL:CU633303 Ensembl:ENSSSCT00000009580 Uniprot:F1S5A8
Length = 795
Score = 1360 (483.8 bits), Expect = 1.3e-141, Sum P(2) = 1.3e-141
Identities = 277/648 (42%), Positives = 406/648 (62%)
Query: 578 LAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNGI---VG 634
+ ++R LP++ +D ++ +Q GETGSGKTTQ+ Q+ +E + G V
Sbjct: 130 ILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVA 189
Query: 635 CTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDS 694
CTQPRRVAAMSVA+RV++EMD LG +VGY+IRFED + T++KYMTDG+LLRE + D
Sbjct: 190 CTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDP 249
Query: 695 DLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPI 754
L++Y VI++DEAHER+L+TD+L G+LK+VV +R D K+IV SATL+A KF +F + P+
Sbjct: 250 LLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPL 309
Query: 755 FHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPP-GDILIFMTGQDEIEAACFAL 813
IPGRT PV Y+ P DY+EAA++ + IH+ GD+L+F+TGQ+EI+ AC +
Sbjct: 310 LTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRI 369
Query: 814 KERMEQLISSTTREVPELLILPIYSQLPADLQAKIFE----KAKEGT--RKCIVATNIAE 867
K ++ L EV ++ I+P+YS LP Q +IFE K + G RK +V+TNIAE
Sbjct: 370 KREVDDL----GPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAE 425
Query: 868 TSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLY 927
TSLT+DG+ +VID G+ K KVYNP++ +++L V +S C+RLY
Sbjct: 426 TSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLY 485
Query: 928 TESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWV 987
TE AY EM + PEI R+NLG+VV FDFMDPP E ++ ++ L
Sbjct: 486 TEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNY 545
Query: 988 LGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKD 1047
L ALN+ G LT+LG M EFPLDP LAKM++ C +EVL+I +MLSVP F RP +
Sbjct: 546 LAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQCFVRPTE 605
Query: 1048 RAEESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQLL 1107
+ +D A+ +F + DHLTLL VY +K++ WC +++++ +SL A VR QL
Sbjct: 606 AKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLS 665
Query: 1108 DILKTLKIPLTSS---GHDFDV-VRKAICSAYFHNAARLKGVGEYINCRNGMPCHLHPSS 1163
I+ +P S+ D+ + +RKA+ + YF A L+ G Y+ ++ LHPS+
Sbjct: 666 RIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVKDNQVVQLHPST 725
Query: 1164 AIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFFSVKD 1211
L + PE+V+Y+E +LTTK Y++ T ++P+WL ++ P ++ + +
Sbjct: 726 V---LDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSN 770
Score = 46 (21.3 bits), Expect = 1.3e-141, Sum P(2) = 1.3e-141
Identities = 12/42 (28%), Positives = 18/42 (42%)
Query: 166 DDRGSERKYLKDDTRSESRGPSRRDNYDSKGRYRGREARDRD 207
+D S +K D + R R D + R R R R+R+
Sbjct: 11 EDYPSGKKRAGTDGKDRDRDRDREDRSKDRDRERDRGDRERE 52
Score = 45 (20.9 bits), Expect = 1.7e-141, Sum P(2) = 1.7e-141
Identities = 13/38 (34%), Positives = 19/38 (50%)
Query: 188 RRDNYDSKGRYRGRE----ARDRDEPEYGGEYGRKRSK 221
+R D K R R R+ ++DRD G+ R+R K
Sbjct: 18 KRAGTDGKDRDRDRDREDRSKDRDRERDRGDREREREK 55
Score = 42 (19.8 bits), Expect = 3.4e-141, Sum P(2) = 3.4e-141
Identities = 13/33 (39%), Positives = 15/33 (45%)
Query: 164 DRD-DRGSERKYLKDDTRSESRGPSRRDNYDSK 195
DRD DR E + KD R RG R+ K
Sbjct: 26 DRDRDRDREDRS-KDRDRERDRGDREREREKEK 57
Score = 39 (18.8 bits), Expect = 7.1e-141, Sum P(2) = 7.1e-141
Identities = 12/41 (29%), Positives = 19/41 (46%)
Query: 186 PSRRDNYDSKGRYRGREARDRDEPEYGGEYGRKRSKYDGTR 226
PS + + G+ R R DRD + + R+R + D R
Sbjct: 14 PSGKKRAGTDGKDRDR---DRDREDRSKDRDRERDRGDRER 51
>UNIPROTKB|F1NHI3 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005689 "U12-type spliceosomal complex"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
GO:GO:0005689 EMBL:AADN02015408 EMBL:AADN02015409 EMBL:AADN02015410
IPI:IPI00577528 Ensembl:ENSGALT00000023259 Uniprot:F1NHI3
Length = 762
Score = 1353 (481.3 bits), Expect = 3.9e-140, Sum P(2) = 3.9e-140
Identities = 275/648 (42%), Positives = 406/648 (62%)
Query: 578 LAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNGI---VG 634
+ ++R LP++ ++ ++ +Q GETGSGKTTQ+ Q+ ++ + G V
Sbjct: 97 ILKKRLQLPVWEYKERFTDILIRHQSFVLVGETGSGKTTQIPQWCVDYMRSLPGPKRGVA 156
Query: 635 CTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDS 694
CTQPRRVAAMSVA+RV++EMD LG +VGY+IRFED + T++KYMTDG+LLRE + D
Sbjct: 157 CTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDP 216
Query: 695 DLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPI 754
L++Y VI++DEAHER+L+TD+L G+LK+VV +R D K+IV SATL+A KF +F + P+
Sbjct: 217 LLERYGVIILDEAHERTLATDILMGVLKEVVRQRADLKVIVMSATLDAGKFQIYFDNCPL 276
Query: 755 FHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPP-GDILIFMTGQDEIEAACFAL 813
IPGRT PV Y+ P DY+EAA++ + IH+ GD+L+F+TGQ+EI+ AC +
Sbjct: 277 LTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRI 336
Query: 814 KERMEQLISSTTREVPELLILPIYSQLPADLQAKIFE----KAKEGT--RKCIVATNIAE 867
K ++ L EV ++ I+P+YS LP Q +IFE K + G RK +V+TNIAE
Sbjct: 337 KREIDDL----GPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAE 392
Query: 868 TSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLY 927
TSLT+DG+ +VID G+ K KVYNP++ +++L V +S C+RLY
Sbjct: 393 TSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLY 452
Query: 928 TESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWV 987
TE AY EM + PEI R+NLG+VV FDFMDPP E ++ ++ L
Sbjct: 453 TEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNY 512
Query: 988 LGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKD 1047
L ALN+ G LT+LG M EFPLDP LAKM++ C +EVL+I +MLSVP F RP +
Sbjct: 513 LAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQCFVRPTE 572
Query: 1048 RAEESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQLL 1107
+ +D A+ +F + DHLTLL VY +K++ WC +++++ +SL A VR QL
Sbjct: 573 AKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLS 632
Query: 1108 DILKTLKIPLTSS---GHDFDV-VRKAICSAYFHNAARLKGVGEYINCRNGMPCHLHPSS 1163
I+ +P S+ D+ + +RKA+ + YF A L+ G Y+ ++ LHPS+
Sbjct: 633 RIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVKDNQVVQLHPST 692
Query: 1164 AIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFFSVKD 1211
L + PE+V+Y+E +LTTK Y++ T ++P+WL ++ P ++ + +
Sbjct: 693 V---LDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSN 737
Score = 39 (18.8 bits), Expect = 3.9e-140, Sum P(2) = 3.9e-140
Identities = 10/35 (28%), Positives = 16/35 (45%)
Query: 187 SRRDNYDSKGRYRGREARDRDEPEYGGEYGRKRSK 221
S + D K R R R+ DR + + + R R +
Sbjct: 15 SSKKRSDGKDRDRDRDRDDRKDRDRDRDRDRDRDR 49
>ZFIN|ZDB-GENE-030131-650 [details] [associations]
symbol:dhx15 "DEAH (Asp-Glu-Ala-His) box
polypeptide 15" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-030131-650 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA CTD:1665 EMBL:CU651678 IPI:IPI00481686
RefSeq:NP_001108613.1 UniGene:Dr.4024 Ensembl:ENSDART00000081245
GeneID:321931 KEGG:dre:321931 NextBio:20807587 Uniprot:E7F3I8
Length = 769
Score = 1338 (476.1 bits), Expect = 2.1e-139, Sum P(2) = 2.1e-139
Identities = 270/648 (41%), Positives = 405/648 (62%)
Query: 578 LAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNGI---VG 634
+ ++R LP++ ++ ++ +Q GETGSGKTTQ+ Q+ ++ + G V
Sbjct: 104 ILKKRLQLPVWEYKERFNDILNRHQSFVLVGETGSGKTTQIPQWCVDMVRSLPGPKRGVA 163
Query: 635 CTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDS 694
CTQPRRVAAMSVA+RV++EMD LG +VGY+IRFED + T++KYMTDG+LLRE + D
Sbjct: 164 CTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDP 223
Query: 695 DLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPI 754
L++Y VI++DEAHER+L+TD+L G+LK+VV +R D K+IV SATL+A KF +F + P+
Sbjct: 224 LLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQVYFDNCPL 283
Query: 755 FHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPP-GDILIFMTGQDEIEAACFAL 813
IPGRT PV Y+ P DY+EAA++ + IH+ GD+L+F+TGQ+EI+ AC +
Sbjct: 284 LTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEDEGDVLLFLTGQEEIDEACKRI 343
Query: 814 KERMEQLISSTTREVPELLILPIYSQLPADLQAKIFE----KAKEGT--RKCIVATNIAE 867
K ++ L +V ++ I+P+YS LP Q +IFE + G RK +V+TNIAE
Sbjct: 344 KREIDDL----GPDVGDIKIIPLYSTLPPQQQQRIFEPPPPRKPNGAIGRKVVVSTNIAE 399
Query: 868 TSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLY 927
TSLT+DG+ +VID G+ K KVYNP++ +++L V +S C+RLY
Sbjct: 400 TSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLY 459
Query: 928 TESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWV 987
TE AY EM + PEI R+NLG+VV FDFMDPP E ++ ++ L
Sbjct: 460 TEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNY 519
Query: 988 LGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKD 1047
L ALN+ G LT+LG M EFPLDP LAKM++ C +EVL+I +MLSVP F RP +
Sbjct: 520 LAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDFNCSNEVLSITAMLSVPQCFVRPTE 579
Query: 1048 RAEESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQLL 1107
+ +D ++ +F + DHLTLL VY +K++ WC +++++ +SL A VR QL
Sbjct: 580 AKKAADESKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLS 639
Query: 1108 DILKTLKIPLTSS---GHDFDV-VRKAICSAYFHNAARLKGVGEYINCRNGMPCHLHPSS 1163
I+ +P S+ D+ + +R+A+ + +F A L+ G Y+ ++ LHPS+
Sbjct: 640 RIMDRFNLPRRSTEFTSRDYYINIRRALVTGFFMQVAHLERTGHYLTVKDNQVVQLHPST 699
Query: 1164 AIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFFSVKD 1211
L + PE+V+Y+E +LTTK Y++ T ++P+WL ++ P ++ + +
Sbjct: 700 V---LDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYEMSN 744
Score = 47 (21.6 bits), Expect = 2.1e-139, Sum P(2) = 2.1e-139
Identities = 14/34 (41%), Positives = 17/34 (50%)
Query: 164 DRDDRGSERKYLKDDTRSESRGPSR-RDNY-DSK 195
DRD+R +R +D R R R RD DSK
Sbjct: 29 DRDERSKDRDRDRDRERDRDRDRDRDRDRERDSK 62
Score = 42 (19.8 bits), Expect = 7.2e-139, Sum P(2) = 7.2e-139
Identities = 14/48 (29%), Positives = 23/48 (47%)
Query: 187 SRRDNYDSKGRYRGREARDRD-EPEYGGEYGRKRSK-YDGTRRTPGRS 232
S++ + D K R R R+ R +D + + E R R + D R +S
Sbjct: 16 SKKRSSDGKDRDRDRDERSKDRDRDRDRERDRDRDRDRDRDRERDSKS 63
>ASPGD|ASPL0000059403 [details] [associations]
symbol:AN0133 species:162425 "Emericella nidulans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000390 "spliceosomal complex disassembly" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0071014 "post-mRNA release
spliceosomal complex" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:BN001308 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACD01000004 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820
OMA:TVLQIHA OrthoDB:EOG4S7NZ4 RefSeq:XP_657737.1 STRING:Q5BH47
EnsemblFungi:CADANIAT00002613 GeneID:2875910 KEGG:ani:AN0133.2
Uniprot:Q5BH47
Length = 769
Score = 1361 (484.2 bits), Expect = 4.4e-139, P = 4.4e-139
Identities = 279/698 (39%), Positives = 426/698 (61%)
Query: 555 EDAKFSQHMKKGEAVSDFAKSKTLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGK 614
ED +F+ + + F+ KT R+ LP+ + RDE LQ+ +++Q GETGSGK
Sbjct: 73 EDNEFNPFTNRPYSSKYFSILKT----RRDLPVHAQRDEFLQLYQQSQILVFVGETGSGK 128
Query: 615 TTQLTQYLLEDGY--TTNGIVGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVT 672
TTQ+ Q++L D T ++ CTQPRRVAAMSVA+RV+ E+D LG++VGY+IRFED+T
Sbjct: 129 TTQIPQFVLLDDLPQTQRKMIACTQPRRVAAMSVAQRVAAELDVTLGEEVGYSIRFEDMT 188
Query: 673 GPSTLIKYMTDGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFK 732
P TL+KYMTDG+LLRE + D +L +Y I++DEAHER++STDVL G+LK+VV RR D K
Sbjct: 189 SPKTLLKYMTDGMLLREAMNDHELSRYSTIILDEAHERTMSTDVLMGLLKEVVQRRPDLK 248
Query: 733 LIVTSATLNAQKFSDFFGSVPIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSP 792
+I+ SATL+AQKF +F P+ +PGRT PV Y+ P +DYVEAA++ + IH T
Sbjct: 249 IIIMSATLDAQKFQRYFNDAPLLAVPGRTHPVEIFYTPEPEQDYVEAAIRTVLQIHATED 308
Query: 793 PGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKA 852
GDIL+F+TG++EIE A + +++I + L + +Y LP +Q +IFE A
Sbjct: 309 EGDILLFLTGEEEIEDAARKISLEGDEMIREA--DAGPLKVYTLYGSLPPHMQQRIFEPA 366
Query: 853 ----KEGTR---KCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSX 905
+ G R K IV+TNIAETSLT+DGI YV+D G+ K K+YNP++ +++L V P+S
Sbjct: 367 PPPRRPGGRPGRKVIVSTNIAETSLTIDGIVYVVDPGFSKQKIYNPRIRVESLLVSPISK 426
Query: 906 XXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXX 965
C+RLYTESA+ E++ PEI R+NL + V
Sbjct: 427 ASAQQRAGRAGRTRPGKCFRLYTESAFKKELIDQTYPEILRSNLSSTVLELKKLGIDDLV 486
Query: 966 XFDFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGC 1025
FD MDPP E ++ ++ +L L L++ G LT LG EFPLDP LA ML+ + C
Sbjct: 487 HFDLMDPPAPETLMRALEELNYLACLDDDGNLTPLGRLASEFPLDPALAVMLISSPEFYC 546
Query: 1026 LDEVLTIVSMLSVPSVFFRPKDRAEESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGD- 1084
+E+L+I ++LSVP +F RP + + +D + F + DHLTLL Y +K + + +
Sbjct: 547 SNEILSITALLSVPQIFVRPASQRKRADEMKNLFAHPDGDHLTLLNAYHAFKSPEAQENP 606
Query: 1085 --WCEEHYLHVKSLRKAREVRSQLLDILKTLKIPLTSSGHD----FDVVRKAICSAYFHN 1138
WC +H+L ++SL+ A VR QLL I++ ++ + S+ + ++ +R+A+C+ +F
Sbjct: 607 KQWCHDHFLSLRSLQSADNVRMQLLRIMEREELEMISTSFEDKKYYENIRRALCAGFFMQ 666
Query: 1139 AARLKGVGE--YINCRNGMPCHLHPSSAIYGLGYTPEYVVYHELILTTKEYMQCATAVEP 1196
A+ + G+ Y+ ++ LHPS+ L + E+V+Y+E +LTTK Y++ TAV+P
Sbjct: 667 VAKKENQGKSMYMTIKDHQNVLLHPSTV---LAHDAEWVLYNEFVLTTKNYIRTVTAVKP 723
Query: 1197 QWLSELGPMFFSVKDSDTSMLEHKKKQKESKTAMEEEM 1234
+WL ++ P ++ + + + + + +E+M
Sbjct: 724 EWLIDIAPTYYDISTFPKGDIRSSLLRAAERLSRKEKM 761
>SGD|S000003088 [details] [associations]
symbol:PRP43 "RNA helicase in the DEAH-box family"
species:4932 "Saccharomyces cerevisiae" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=IMP;IDA] [GO:0000390 "spliceosomal
complex disassembly" evidence=IGI;IDA] [GO:0030490 "maturation of
SSU-rRNA" evidence=IGI] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IDA] [GO:0071014 "post-mRNA
release spliceosomal complex" evidence=IMP] [GO:0006364 "rRNA
processing" evidence=IMP] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0042273 "ribosomal large subunit biogenesis" evidence=IMP]
[GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 SGD:S000003088
GO:GO:0005739 GO:GO:0005524 EMBL:BK006941 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0000463
GO:GO:0004004 HOGENOM:HOG000175261 GO:GO:0000390 GO:GO:0000466
GO:GO:0000462 KO:K12820 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
OrthoDB:EOG4S7NZ4 GO:GO:0071014 EMBL:U41851 EMBL:Z72642 PIR:S64130
RefSeq:NP_011395.1 PDB:2XAU PDB:3KX2 PDBsum:2XAU PDBsum:3KX2
ProteinModelPortal:P53131 SMR:P53131 DIP:DIP-5152N IntAct:P53131
MINT:MINT-497996 STRING:P53131 PaxDb:P53131 PeptideAtlas:P53131
PRIDE:P53131 EnsemblFungi:YGL120C GeneID:852757 KEGG:sce:YGL120C
CYGD:YGL120c EvolutionaryTrace:P53131 NextBio:972201
Genevestigator:P53131 GermOnline:YGL120C Uniprot:P53131
Length = 767
Score = 1361 (484.2 bits), Expect = 4.4e-139, P = 4.4e-139
Identities = 281/677 (41%), Positives = 416/677 (61%)
Query: 582 RQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDG--YTTNGIVGCTQPR 639
R+ LP+ + RDE L++ + NQ GETGSGKTTQ+ Q++L D + N V CTQPR
Sbjct: 90 RRELPVHAQRDEFLKLYQNNQIMVFVGETGSGKTTQIPQFVLFDEMPHLENTQVACTQPR 149
Query: 640 RVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDSDLDKY 699
RVAAMSVA+RV+EEMD +LG++VGY+IRFE+ T T++KYMTDG+LLRE ++D DL +Y
Sbjct: 150 RVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMEDHDLSRY 209
Query: 700 RVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPIFHIPG 759
I++DEAHER+L+TD+L G+LK+VV RR D K+I+ SATL+A+KF +F P+ +PG
Sbjct: 210 SCIILDEAHERTLATDILMGLLKQVVKRRPDLKIIIMSATLDAEKFQRYFNDAPLLAVPG 269
Query: 760 RTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQ 819
RT+PV Y+ DY+++A++ + IH T GDIL+F+TG+DEIE A + +Q
Sbjct: 270 RTYPVELYYTPEFQRDYLDSAIRTVLQIHATEEAGDILLFLTGEDEIEDAVRKISLEGDQ 329
Query: 820 LISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGT-----RKCIVATNIAETSLTVDG 874
L+ L + P+Y LP Q +IFE A E RK +++TNIAETSLT+DG
Sbjct: 330 LVRE--EGCGPLSVYPLYGSLPPHQQQRIFEPAPESHNGRPGRKVVISTNIAETSLTIDG 387
Query: 875 IFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLN 934
I YV+D G+ K KVYNP++ +++L V P+S C+RLYTE A+
Sbjct: 388 IVYVVDPGFSKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEEAFQK 447
Query: 935 EMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNV 994
E++ PEI R+NL + V FDFMDPP E ++ ++ +L L L++
Sbjct: 448 ELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPPAPETMMRALEELNYLACLDDE 507
Query: 995 GALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDA 1054
G LT LG +FPLDP LA ML+ + C E+LTIV+MLSVP+VF RP + +D
Sbjct: 508 GNLTPLGRLASQFPLDPMLAVMLIGSFEFQCSQEILTIVAMLSVPNVFIRPTKDKKRADD 567
Query: 1055 AREKFFVQESDHLTLLYVYQQWKEHQ-YR-G--DWCEEHYLHVKSLRKAREVRSQLLDIL 1110
A+ F + DH+TLL VY +K + Y G WC +HYL+ +SL A +RSQL ++
Sbjct: 568 AKNIFAHPDGDHITLLNVYHAFKSDEAYEYGIHKWCRDHYLNYRSLSAADNIRSQLERLM 627
Query: 1111 KTLKIPLTSSGHD----FDVVRKAICSAYFHNAARLK-GVGEYINCRNGMPCHLHPSSAI 1165
+ L ++ ++ FD +RKA+ S +F A+ + G YI ++ +HPS+
Sbjct: 628 NRYNLELNTTDYESPKYFDNIRKALASGFFMQVAKKRSGAKGYITVKDNQDVLIHPSTV- 686
Query: 1166 YGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFFSVKD---SDTSMLEHKKK 1222
LG+ E+V+Y+E +LT+K Y++ T+V P+WL E+ P ++ + + D + + K
Sbjct: 687 --LGHDAEWVIYNEFVLTSKNYIRTVTSVRPEWLIEIAPAYYDLSNFQKGDVKLSLERIK 744
Query: 1223 QKESKTAMEEEMENLRK 1239
+K + ++ +N +K
Sbjct: 745 EKVDRLNELKQGKNKKK 761
>ZFIN|ZDB-GENE-070410-11 [details] [associations]
symbol:zgc:158828 "zgc:158828" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-070410-11
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HOVERGEN:HBG039428 OrthoDB:EOG4V9TQ5
EMBL:BC117646 IPI:IPI00851766 UniGene:Dr.86097 Uniprot:Q1ECW4
Length = 691
Score = 1351 (480.6 bits), Expect = 5.1e-138, P = 5.1e-138
Identities = 277/659 (42%), Positives = 405/659 (61%)
Query: 577 TLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNG-IVGC 635
T+ +QRQ LP+F R+ +L ++ Q GETGSGK+TQ+ QYLLE G+ G ++G
Sbjct: 36 TIEKQRQRLPVFKHRNNILYLVESFQTVVIVGETGSGKSTQIPQYLLEAGWAAEGKVIGV 95
Query: 636 TQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGP-STLIKYMTDGVLLRETLKDS 694
TQPRRVAA SVA RV+EE LG +VGY IRF+D + P +T IK++TDG+L+RE + D
Sbjct: 96 TQPRRVAATSVATRVAEERGAFLGHEVGYTIRFDDCSDPHATRIKFLTDGMLVREMMSDP 155
Query: 695 DLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFG---- 750
L KY V+++DEAHER+L TD+ G+LKK++ +RRD +LIV SATL+A+KF DFF
Sbjct: 156 LLKKYSVLILDEAHERTLYTDIAIGLLKKILKKRRDLRLIVASATLDAKKFQDFFNLNES 215
Query: 751 ------SVPIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQD 804
+ I + GRTFPV+ Y+ +P DYV+A V+ + IH T GD+L F+TGQ+
Sbjct: 216 GDASKDTCGILTVEGRTFPVDIFYTVSPVPDYVKATVETVLKIHETEDDGDVLAFLTGQE 275
Query: 805 EIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATN 864
E+E L+E+ L ++ L +LP+Y+ LP + Q ++FE+ RK +VATN
Sbjct: 276 EVEKVVSLLQEQARTLSRYGMKK--HLCVLPMYAGLPYNEQMRVFERMAPTVRKVVVATN 333
Query: 865 IAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCY 924
IAETS+T++G+ +VID + K++ YNP+ +++L V P+S C+
Sbjct: 334 IAETSITINGVVFVIDCAFVKIRAYNPRTAIESLIVTPISKASACQRAGRAGRNRAGKCF 393
Query: 925 RLYTESAYLNEMLP-SPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMY 983
RLYTE + E LP S VPE+QR+NL V+ F F+ PPP ++++ ++
Sbjct: 394 RLYTEEDF--EKLPESTVPEMQRSNLAPVILQLKALGIDNVLRFSFLSPPPAQSMVQALE 451
Query: 984 QLWVLGALNNVGALTD-LGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVF 1042
L+ LG L+ G LTD +G +M EFPL P AKMLL GC E++TI +M+ + ++F
Sbjct: 452 LLFALGGLDQYGRLTDPMGVRMAEFPLSPMFAKMLLESGNFGCSKEIVTIAAMMQIQNIF 511
Query: 1043 FRPKDRAEESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREV 1102
P ++ + + KF V E DHLT+L VY+ + +HQ WC++H+L+ K L +A V
Sbjct: 512 VAPHNQRKSAAREHRKFAVAEGDHLTMLNVYEAFIKHQKSSQWCQDHFLNYKGLLRATAV 571
Query: 1103 RSQLLDILKTLKIPLTSSGHDFDVVRKAICSAYFHNAARLKGVGEYINCRNGMPCHLHPS 1162
R QL +L K+P TSS D DV+ + I S +F NAAR+ G Y R+ ++HP
Sbjct: 572 REQLRHLLNKFKVPRTSSEGDPDVILRCIVSGFFANAARMHHSGSYRTLRDDRELYIHPD 631
Query: 1163 SAIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFFSVKDSDTSMLEHKK 1221
S +YG P++VV++E++ T+K YM+ TAVE WL EL P F+ K + L K+
Sbjct: 632 SVLYG-EKPPKWVVFNEVVQTSKYYMRDVTAVESSWLVELAPHFY--KQAKHGSLSSKR 687
>UNIPROTKB|E1BDN4 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 KO:K13117 OMA:NIFVVPP CTD:60625
EMBL:DAAA02036576 EMBL:DAAA02036577 EMBL:DAAA02036578
IPI:IPI00707123 RefSeq:NP_001179272.1 UniGene:Bt.52291
Ensembl:ENSBTAT00000005281 GeneID:513148 KEGG:bta:513148
NextBio:20870723 Uniprot:E1BDN4
Length = 703
Score = 1346 (478.9 bits), Expect = 1.7e-137, P = 1.7e-137
Identities = 281/645 (43%), Positives = 395/645 (61%)
Query: 577 TLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNG-IVGC 635
++ +QRQ LP+F +R+ +L +I Q GETG GK+TQ+ QYL E G+T G +VG
Sbjct: 46 SIEQQRQKLPVFKLRNHILYLIENYQTVVIIGETGCGKSTQIPQYLAEAGWTAEGRVVGV 105
Query: 636 TQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGP-STLIKYMTDGVLLRETLKDS 694
TQPRRVAA++VA RV+EE LG +VGY IRF+D T P +T IK++TDG+L+RE + D
Sbjct: 106 TQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTNPLATRIKFLTDGMLVREMMVDP 165
Query: 695 DLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFG---- 750
L KY I++DEAHER+L TD+ G+LKK+ +R D +LIV SATL+A+KF DFF
Sbjct: 166 LLTKYSAIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDAEKFRDFFNHNDT 225
Query: 751 SVP------IFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQD 804
S P I + GRTFPV+ Y ++P DY+++ V+ M IH T GDIL F+TGQ+
Sbjct: 226 SDPTRDTCVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVMKIHQTEGDGDILAFLTGQE 285
Query: 805 EIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATN 864
E+E L E+ L + + L ILP+Y+ LP+ Q K+FE+ RK IVATN
Sbjct: 286 EVETVVSMLIEQARALGQTGMKR--HLRILPMYAGLPSFEQMKVFERVSRSVRKVIVATN 343
Query: 865 IAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCY 924
+AETS+T+ GI YVID G+ K++ YNP+ ++ L V PVS CY
Sbjct: 344 VAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRSRSGKCY 403
Query: 925 RLYTESAYLNEMLP-SPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMY 983
RLYTE A+ + LP S VPE+QR+NL V+ F FM PPP ++++ ++
Sbjct: 404 RLYTEEAF--DQLPQSTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQALE 461
Query: 984 QLWVLGALNNVGALTD-LGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVF 1042
L+ LG L+ LT+ LG ++ EFPL+P AKMLL GC E+L+I +M+ + +VF
Sbjct: 462 LLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNVF 521
Query: 1043 FRPKDRAEESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREV 1102
P ++ ++ A KF V+E DHLT+L VY+ + +H WC+EH+L+ K L +A V
Sbjct: 522 VVPSNQKSQAIRAHRKFAVEEGDHLTMLNVYEAFIKHNKNSQWCQEHFLNYKGLVRAATV 581
Query: 1103 RSQLLDILKTLKIPLTSSGHDFDVVRKAICSAYFHNAARLKGVGEYINCRNGMPCHLHPS 1162
R QL +L ++P SS D D V + I S +F NAAR G Y R+ H+HP+
Sbjct: 582 REQLKKLLVKFQVPKKSSEGDPDPVLRCIVSGFFANAARFHSTGAYRTIRDDHELHIHPA 641
Query: 1163 SAIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFF 1207
S +Y P +V+Y+E+I T+K YM+ TA+E WL EL P F+
Sbjct: 642 SVLYA-EKPPRWVIYNEVIQTSKYYMRDVTAIESAWLLELAPHFY 685
>DICTYBASE|DDB_G0270110 [details] [associations]
symbol:dhx33 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
dictyBase:DDB_G0270110 GO:GO:0005524 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K14781 RefSeq:XP_646548.1
EnsemblProtists:DDB0233404 GeneID:8617514 KEGG:ddi:DDB_G0270110
InParanoid:Q55CD3 OMA:EICINRE Uniprot:Q55CD3
Length = 730
Score = 1343 (477.8 bits), Expect = 3.6e-137, P = 3.6e-137
Identities = 266/652 (40%), Positives = 415/652 (63%)
Query: 576 KTLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNGIVGC 635
K + Q++ LP+F+ +D LL+ +E+ ETG+GKTTQ+ QYL E+GY NGI+
Sbjct: 64 KEIKLQKESLPVFTAKDALLKNFKEHSTVIIISETGTGKTTQIPQYLYENGYKDNGIIAI 123
Query: 636 TQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDSD 695
TQPRRVAA+S++KRVS+EM ELGD+VGY +RF+D T T +KYMTDG+L+RE + DS
Sbjct: 124 TQPRRVAAVSISKRVSQEMGVELGDQVGYCVRFDDKTNEKTKLKYMTDGMLVREAMLDSS 183
Query: 696 LDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRD---FKLIVTSATLNAQKFSDFFGSV 752
L KY VI++DEAHER+L+TDVLFG+LK + RR K+I+ SATL+A+ FS +F +
Sbjct: 184 LSKYSVIILDEAHERTLNTDVLFGLLKSIQKRREKKNPLKIIIMSATLDAELFSQYFNNA 243
Query: 753 PIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHIT------------SPPGDILIFM 800
P+ +I GR FPV Y++ +DYV+AA+ + IHI GDIL+F+
Sbjct: 244 PVLYIEGRQFPVQIYYTEEIQKDYVDAALITVLQIHIAHLTDKSINKEEEEDGGDILVFL 303
Query: 801 TGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCI 860
TG+DEIE L +R+ +L + +L++ PI+S LP + Q K+FEKA +G+RK I
Sbjct: 304 TGRDEIENLEKLLLDRIPRLPVGSK----DLIVCPIFSALPQEQQMKVFEKAPKGSRKVI 359
Query: 861 VATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXX 920
+ATNIAETSLT++GI YV+D+G K K++NPK+G+D+L + P+S
Sbjct: 360 LATNIAETSLTINGIRYVVDSGAVKSKIFNPKIGIDSLNIIPISKASAKQRTGRAGREFE 419
Query: 921 XXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILN 980
CYRLYT+ + ++ S +PEI+R+N+ NV+ FDF++ PP +++
Sbjct: 420 GKCYRLYTQETF-EKLDTSSIPEIKRSNIANVILQLKTIGINDILSFDFLESPPVASVIK 478
Query: 981 SMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPS 1040
S+ L+ L A+++ G+LT+LG KM FPLDP +K L+ + C +EVL I+S+LSV S
Sbjct: 479 SLELLFCLDAISDNGSLTELGKKMALFPLDPMYSKTLIKSIEFECSEEVLIIISILSVES 538
Query: 1041 VFFRPKDRAEESDAAREKFFVQESDHLTLLYVYQQWKEH--QYRGDWCEEHYLHVKSLRK 1098
+FF PK++ +E + ++ FF + DH+T L V++++++ Q + WC +H++++KS+ K
Sbjct: 539 IFFTPKEKKKEVEDVKKIFFSPDGDHITFLNVFREFQKSKPQQQQQWCFDHFINLKSMIK 598
Query: 1099 AREVRSQLLDILKTLKIPLTSSGHDFDVVRKAICSAYFHNAARLKGVGEYINCRNGMPCH 1158
V QL+ +LK+P+ S G DFD ++K+ +F N A L+ +Y +
Sbjct: 599 VLNVFEQLVKYCISLKLPIVSCGSDFDRIKKSFIGGFFLNTAILQPDKKYKTMVDNKEIQ 658
Query: 1159 LHPSSAIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFFSVK 1210
+HP+S ++ P++++Y+EL +TTK + + +E WL+E+ P ++ +
Sbjct: 659 IHPTSFLFD--QKPQHILYNELTITTKAFARNIIPIEGSWLAEICPKYYGTR 708
>UNIPROTKB|D3ZZG1 [details] [associations]
symbol:Dhx35 "Protein Dhx35" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1311165 GO:GO:0005524 GO:GO:0003676 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 IPI:IPI00951610
Ensembl:ENSRNOT00000068625 OrthoDB:EOG4V9TQ5 ArrayExpress:D3ZZG1
Uniprot:D3ZZG1
Length = 703
Score = 1343 (477.8 bits), Expect = 3.6e-137, P = 3.6e-137
Identities = 279/645 (43%), Positives = 395/645 (61%)
Query: 577 TLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNG-IVGC 635
++ +QRQ LP+F +R+ +L ++ Q GETG GK+TQ+ QYL E G+T G +VG
Sbjct: 46 SIEQQRQKLPVFKLRNHILYLVENYQTVVIVGETGCGKSTQVPQYLAEAGWTAEGRVVGV 105
Query: 636 TQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGP-STLIKYMTDGVLLRETLKDS 694
TQPRRVAA++VA RV++E LG +VGY IRF+D T P +T IK++TDG+L+RE + D
Sbjct: 106 TQPRRVAAVTVAGRVADERGAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVDP 165
Query: 695 DLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFG---- 750
L KY V+++DEAHER+L TD+ G+LKK+ +R D +LIV SATL+A+KF DFF
Sbjct: 166 LLTKYSVVMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDAEKFRDFFNQNET 225
Query: 751 SVP------IFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQD 804
S P I + GRTFPV+ Y ++P DY++A V + IH T GDIL F+TGQ+
Sbjct: 226 SDPARDTCVILTVEGRTFPVDIFYLQSPVPDYIKATVDTVVKIHQTEGDGDILAFLTGQE 285
Query: 805 EIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATN 864
E+E L E+ L + ++ L +LP+Y+ LP+ Q K+FE+ RK IVATN
Sbjct: 286 EVETVVSMLIEQARALARTGMKK--HLRVLPMYAGLPSFEQMKVFERVSHSVRKVIVATN 343
Query: 865 IAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCY 924
+AETS+T+ GI YVID G+ K++ YNP+ ++ L V PVS CY
Sbjct: 344 VAETSITISGIVYVIDCGFMKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRNRSGKCY 403
Query: 925 RLYTESAYLNEMLP-SPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMY 983
RLYTE A+ E LP S VPE+QR+NL VV F FM PPP ++++ ++
Sbjct: 404 RLYTEEAF--EQLPQSTVPEMQRSNLAPVVLQLKALGIDSVLRFHFMSPPPAQSMVQALE 461
Query: 984 QLWVLGALNNVGALTD-LGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVF 1042
L+ LG L+ LT+ LG ++ EFPL+P AKMLL GC E+L+I +M+ + +VF
Sbjct: 462 LLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNVF 521
Query: 1043 FRPKDRAEESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREV 1102
P ++ ++ KF V+E DHLT+L VY+ + +H WC+EH+L+ K L +A V
Sbjct: 522 VFPSNQKSQATRVHRKFAVEEGDHLTMLNVYEAFIKHNKSSQWCQEHFLNYKGLVRAATV 581
Query: 1103 RSQLLDILKTLKIPLTSSGHDFDVVRKAICSAYFHNAARLKGVGEYINCRNGMPCHLHPS 1162
R QL +L ++P SS D D V + I S +F NAAR G Y R+ H+HP+
Sbjct: 582 RDQLKKLLVKFQVPKMSSEGDPDPVLRCIVSGFFANAARFHSTGAYRTIRDDHELHIHPA 641
Query: 1163 SAIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFF 1207
S +Y P +V+Y+E+I T+K YM+ TA+E WL EL P F+
Sbjct: 642 SVLYA-EKPPRWVIYNEVIQTSKYYMRDVTAIESAWLLELAPHFY 685
>UNIPROTKB|F1SDW0 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:CU442751
Ensembl:ENSSSCT00000008044 Uniprot:F1SDW0
Length = 719
Score = 1339 (476.4 bits), Expect = 9.5e-137, P = 9.5e-137
Identities = 279/645 (43%), Positives = 393/645 (60%)
Query: 577 TLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNG-IVGC 635
++ +QRQ LP+F +R+ +L +I Q GETG GK+TQ+ QYL E G+T G +VG
Sbjct: 46 SIEQQRQKLPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGV 105
Query: 636 TQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGP-STLIKYMTDGVLLRETLKDS 694
TQPRRVAA++VA RV+EE LG +VGY IRF+D T P +T IK++TDG+L+RE + D
Sbjct: 106 TQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVDP 165
Query: 695 DLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFG---- 750
L KY I++DEAHER+L TD+ G+LKK+ +R D +LIV SATL+A+KF DFF
Sbjct: 166 LLTKYSAIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDAEKFRDFFNQNDT 225
Query: 751 SVP------IFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQD 804
S P I + GRTFPV+ Y ++P DY+++ V+ M IH T GDIL F+TGQ+
Sbjct: 226 SDPPRDTCVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVMKIHQTEGDGDILAFLTGQE 285
Query: 805 EIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATN 864
E+E L E+ L T L +LP+Y+ LP+ Q K+FE+ RK IVATN
Sbjct: 286 EVETVVSMLIEQARAL--GRTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATN 343
Query: 865 IAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCY 924
+AETS+T+ GI YVID G+ K++ YNP+ ++ L V PVS CY
Sbjct: 344 VAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRAGRSRSGKCY 403
Query: 925 RLYTESAYLNEMLP-SPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMY 983
RLYTE A+ + LP S VPE+QR+NL V+ F FM PPP ++++ ++
Sbjct: 404 RLYTEDAF--DQLPQSTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQALE 461
Query: 984 QLWVLGALNNVGALTD-LGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVF 1042
L+ LG L+ LT+ LG ++ EFPL+P AKMLL GC E+L+I +M+ + ++F
Sbjct: 462 LLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNIF 521
Query: 1043 FRPKDRAEESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREV 1102
P ++ ++ KF V+E DHLT+L VY+ + +H WC+EH+L+ K L +A V
Sbjct: 522 VVPSNQKSQAIRVHRKFAVEEGDHLTMLNVYEAFIKHNKNSQWCQEHFLNYKGLVRAATV 581
Query: 1103 RSQLLDILKTLKIPLTSSGHDFDVVRKAICSAYFHNAARLKGVGEYINCRNGMPCHLHPS 1162
R QL +L ++P SS D D V + I S +F NAAR G Y R+ H+HP+
Sbjct: 582 REQLKKLLVKFQVPKKSSEGDPDPVLRCIVSGFFANAARFHSTGVYRTIRDDHELHIHPA 641
Query: 1163 SAIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFF 1207
S +Y P +V+Y+E+I T+K YM+ TA+E WL EL P F+
Sbjct: 642 SVLYA-EKPPRWVIYNEVIQTSKYYMRDVTAIESAWLLELAPHFY 685
>UNIPROTKB|E1C4U5 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0071013 "catalytic step
2 spliceosome" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:AADN02019394
IPI:IPI00591771 Ensembl:ENSGALT00000005796 Uniprot:E1C4U5
Length = 705
Score = 1332 (473.9 bits), Expect = 5.2e-136, P = 5.2e-136
Identities = 282/649 (43%), Positives = 397/649 (61%)
Query: 575 SKTLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNG-IV 633
S ++ +QRQ LP+F +R+ +L ++ Q GETG GK+TQ+ QYL E G+T G +V
Sbjct: 44 SLSIEQQRQKLPVFKLRNHILYLVESYQTLVIVGETGCGKSTQIPQYLAEAGWTAEGRVV 103
Query: 634 GCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGP-STLIKYMTDGVLLRETLK 692
G TQPRRVAA+SVA RV++E LG +VGY IRF+D T P +T IK++TDG+L+RE +
Sbjct: 104 GVTQPRRVAAVSVAGRVADERGAVLGHEVGYCIRFDDCTDPQATRIKFLTDGMLVREMMA 163
Query: 693 DSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSV 752
D L +Y V+++DEAHER+L TD+ G+LKK+ +R D +LIV SATL+A+KF DFF
Sbjct: 164 DPLLTRYSVLMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDAEKFRDFFNQN 223
Query: 753 ----P------IFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTG 802
P I + GRTFPV+ Y ++P DY+++ V+ AM IH GDIL F+TG
Sbjct: 224 DTGDPSKDTSVILTVEGRTFPVDIFYIQSPVPDYIKSTVETAMKIHQMENDGDILAFLTG 283
Query: 803 QDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVA 862
Q+E+E L E+ L + R+ L +LP+Y+ LP+ Q K+FE+ RK IVA
Sbjct: 284 QEEVETVVSMLIEQARALSRTGMRK--HLRVLPMYAGLPSPDQMKVFERVSRSVRKVIVA 341
Query: 863 TNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXX 922
TN+AETS+T+ GI YVID G+ K++ YNPK ++ L V PVS
Sbjct: 342 TNVAETSITIHGIAYVIDCGFVKLRAYNPKTAIECLVVVPVSKASANQRAGRAGRNRSGK 401
Query: 923 CYRLYTESAYLNEMLP-SPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNS 981
CYRLYT + E LP S VPE+QR+NL V+ F F+ PPP ++++ +
Sbjct: 402 CYRLYTATEEDFEKLPQSTVPEMQRSNLAPVILQLKALGIDNVLRFPFLSPPPAQSMVQA 461
Query: 982 MYQLWVLGALNNVGALTD-LGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPS 1040
+ L+ LG L+ LT+ LG ++ EFPL+P AKMLL GC E+LTI +M+ + +
Sbjct: 462 LELLYALGGLDMHCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILTIAAMMQIQN 521
Query: 1041 VFFRPKDRAEESDAARE--KFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRK 1098
+F P + ++S AAR+ KF V+E DHLT+L VY+ + +H WC+EH+L+ K L +
Sbjct: 522 IFLIPPN--QKSQAARQHRKFAVEEGDHLTMLNVYEAFVKHSKSSQWCQEHFLNYKGLVR 579
Query: 1099 AREVRSQLLDILKTLKIPLTSSGHDFDVVRKAICSAYFHNAARLKGVGEYINCRNGMPCH 1158
A VR QL +L K+P SS D D V + I S +F NAA+ G Y R+ H
Sbjct: 580 ASVVREQLKKLLVCFKVPKKSSEGDPDPVLRCIVSGFFANAAKFHSTGAYRTIRDDHELH 639
Query: 1159 LHPSSAIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFF 1207
+HP+S +Y P +VVY+E+I T K YM+ TA+E WL EL P F+
Sbjct: 640 IHPTSVLYA-EKPPRWVVYNEVIQTAKYYMRDVTAIESAWLVELAPHFY 687
>UNIPROTKB|Q9H5Z1 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CH471077 GO:GO:0003676 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HOVERGEN:HBG039428 KO:K13117 OMA:NIFVVPP
EMBL:AK026412 EMBL:AK025541 EMBL:AL023803 EMBL:BC132669
IPI:IPI00030288 RefSeq:NP_068750.2 UniGene:Hs.444520
ProteinModelPortal:Q9H5Z1 SMR:Q9H5Z1 IntAct:Q9H5Z1
PhosphoSite:Q9H5Z1 DMDM:20137971 PRIDE:Q9H5Z1 DNASU:60625
Ensembl:ENST00000252011 GeneID:60625 KEGG:hsa:60625 UCSC:uc002xjh.3
CTD:60625 GeneCards:GC20P037590 HGNC:HGNC:15861 neXtProt:NX_Q9H5Z1
PharmGKB:PA27222 InParanoid:Q9H5Z1 PhylomeDB:Q9H5Z1
GenomeRNAi:60625 NextBio:65461 ArrayExpress:Q9H5Z1 Bgee:Q9H5Z1
CleanEx:HS_DHX35 Genevestigator:Q9H5Z1 GermOnline:ENSG00000101452
Uniprot:Q9H5Z1
Length = 703
Score = 1325 (471.5 bits), Expect = 2.9e-135, P = 2.9e-135
Identities = 275/645 (42%), Positives = 393/645 (60%)
Query: 577 TLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNG-IVGC 635
++ +QRQ LP+F +R+ +L +I Q GETG GK+TQ+ QYL E G+T G +VG
Sbjct: 46 SIEQQRQKLPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGV 105
Query: 636 TQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGP-STLIKYMTDGVLLRETLKDS 694
TQPRRVAA++VA RV+EE LG +VGY IRF+D T +T IK++TDG+L+RE + D
Sbjct: 106 TQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATRIKFLTDGMLVREMMVDP 165
Query: 695 DLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFG---- 750
L KY VI++DEAHER+L TD+ G+LKK+ +R D +LIV SATL+A KF DFF
Sbjct: 166 LLTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDADKFRDFFNQNET 225
Query: 751 SVP------IFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQD 804
S P I + GRTFPV+ Y ++P DY+++ V+ + IH T GD+L F+TGQ+
Sbjct: 226 SDPARDTCVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVVKIHQTEGDGDVLAFLTGQE 285
Query: 805 EIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATN 864
E+E L E+ L + + L +LP+Y+ LP+ Q K+FE+ RK IVATN
Sbjct: 286 EVETVVSMLIEQARALARTGMKR--HLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATN 343
Query: 865 IAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCY 924
+AETS+T+ GI YVID G+ K++ YNP+ ++ L V PVS CY
Sbjct: 344 VAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRSRSGKCY 403
Query: 925 RLYTESAYLNEMLP-SPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMY 983
RLYTE A+ + LP S VPE+QR+NL V+ F FM PPP ++++ ++
Sbjct: 404 RLYTEEAF--DKLPQSTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQALE 461
Query: 984 QLWVLGALNNVGALTD-LGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVF 1042
L+ LG L+ LT+ LG ++ EFPL+P AKMLL GC E+L+I +M+ + ++F
Sbjct: 462 LLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNIF 521
Query: 1043 FRPKDRAEESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREV 1102
P ++ + KF V+E DHLT+L +Y+ + +H WC+EH+L+ K L +A V
Sbjct: 522 VVPPNQKSHAIRVHRKFAVEEGDHLTMLNIYEAFIKHNKDSKWCQEHFLNYKGLVRAATV 581
Query: 1103 RSQLLDILKTLKIPLTSSGHDFDVVRKAICSAYFHNAARLKGVGEYINCRNGMPCHLHPS 1162
R QL +L ++P SS D D+V + I S +F NAAR G Y R+ H+HP+
Sbjct: 582 REQLKKLLVKFQVPRKSSEGDPDLVLRCIVSGFFANAARFHSTGAYRTIRDDHELHIHPA 641
Query: 1163 SAIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFF 1207
S +Y P +V+Y+E+I T+K YM+ TA+E WL EL P F+
Sbjct: 642 SVLYA-EKPPRWVIYNEVIQTSKYYMRDVTAIESAWLLELAPHFY 685
>UNIPROTKB|G4NHA6 [details] [associations]
symbol:MGG_03893 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp43" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:CM001236 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12820 RefSeq:XP_003719983.1
EnsemblFungi:MGG_03893T0 GeneID:2677480 KEGG:mgr:MGG_03893
Uniprot:G4NHA6
Length = 779
Score = 1322 (470.4 bits), Expect = 6.0e-135, P = 6.0e-135
Identities = 274/674 (40%), Positives = 399/674 (59%)
Query: 578 LAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDG--YTTNGIVGC 635
+ + R+ LP+ R E L V + Q GETGSGKTTQ+ QY+L D + +V C
Sbjct: 100 ILKTRRNLPVHQHRQEFLDVYHKTQIMVFVGETGSGKTTQIPQYVLYDELPHLNKKMVAC 159
Query: 636 TQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDSD 695
TQPRRVAAMSVA+RV++E+D ELG +VGY+IRFE+ T PST++KYMTDG LLRET+ D +
Sbjct: 160 TQPRRVAAMSVAQRVADELDVELGQEVGYSIRFENKTTPSTILKYMTDGQLLRETIHDPN 219
Query: 696 LDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPIF 755
+ +Y I++DEAHER+L+TD+L +LK++ RR D K+I+ SATL+A KF +F PI
Sbjct: 220 MTRYSCIIIDEAHERTLATDILMALLKQLSLRRSDLKIIIMSATLDAAKFQRYFFEAPIL 279
Query: 756 HIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKE 815
+PGRT PV Y+ DY+EA+V+ + IH T GDIL+F+TG++EIE C ++
Sbjct: 280 AVPGRTHPVEIFYTAEAERDYIEASVRTVLQIHATEAEGDILLFLTGEEEIEDVCRKVRL 339
Query: 816 RMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKA----KEGTR---KCIVATNIAET 868
+++LI + + + P+Y LP Q KIF A K+G R KCIVATNIAET
Sbjct: 340 EVDELIRDA--DCGPMEVYPLYGTLPPQQQQKIFNAAPPPLKKGGRPGRKCIVATNIAET 397
Query: 869 SLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYT 928
SLT+DGI YV+D G+ K K+YN ++ +++L V P+S C+RLYT
Sbjct: 398 SLTIDGIVYVVDPGFSKQKIYNARIRVESLLVTPISRASAQQRAGRAGRTRPGKCFRLYT 457
Query: 929 ESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVL 988
E+A+ E++ PEI R+NL N + FDFMDPP E ++ ++ +L L
Sbjct: 458 EAAFKKELIEQTYPEILRSNLSNTILELKKLGVDDLVHFDFMDPPAPETMMRALEELNYL 517
Query: 989 GALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDR 1048
LN+ G LTDLG E+PLDP LA ML+ + C +E+L++ S+LSVP VF RP +
Sbjct: 518 SCLNDDGDLTDLGHMASEYPLDPALAVMLVSSPEFYCSNEMLSVTSLLSVPQVFMRPANN 577
Query: 1049 AEESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGD----WCEEHYLHVKSLRKAREVRS 1104
+ +D +E F E DHLTLL Y +K +G WC EH+L + L A VR+
Sbjct: 578 RKRADEMKEHFKHMEGDHLTLLNAYHAFKSEMAKGTDMKKWCHEHFLSYRHLSSADNVRA 637
Query: 1105 QLLDI-----LKTLKIPLTSSGHDFDVVRKAICSAYFHNAARLKGVGE-YINCRNGMPCH 1158
QL I L+ + P T + + +R+ + + +F A + G+ Y ++
Sbjct: 638 QLKGIMERQDLELVSTPFTDKNY-YTNIRRCLVAGFFMQVALRETSGKVYHTIKDNQNVM 696
Query: 1159 LHPSSAIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFFSVKDSDTSMLE 1218
LHPSS + Y E+V+YHE +LT+K+Y++ T + P+WL ++ P ++ + + + +
Sbjct: 697 LHPSSVLT-TDY--EWVLYHEFVLTSKQYIRTVTGIRPEWLIDIAPNYYDLDNFEDDQAK 753
Query: 1219 HKKKQKESKTAMEE 1232
K K E
Sbjct: 754 RALKSVVEKMKRRE 767
>UNIPROTKB|B4DVG8 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 GO:GO:0004386
InterPro:IPR011709 Pfam:PF07717 HOGENOM:HOG000175261 EMBL:AC009087
UniGene:Hs.151218 HGNC:HGNC:17211 ChiTaRS:DHX38 EMBL:AK301074
IPI:IPI00909589 SMR:B4DVG8 STRING:B4DVG8 Ensembl:ENST00000536867
UCSC:uc010vmp.2 HOVERGEN:HBG093770 Uniprot:B4DVG8
Length = 539
Score = 1309 (465.8 bits), Expect = 1.4e-133, P = 1.4e-133
Identities = 246/442 (55%), Positives = 314/442 (71%)
Query: 845 QAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVS 904
QAKIF+KA +G RKCIVATNIAETSLTVDGI +VID+GY K+KV+NP++GMDALQ++P+S
Sbjct: 99 QAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPIS 158
Query: 905 XXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXX 964
C+RLYT+SAY NE+L + VPEIQRTNL NVV
Sbjct: 159 QANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDL 218
Query: 965 XXFDFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLG 1024
F FMDPPP++N+LNSMYQLW+LGAL+N G LT G MVEFPLDP L+KML++ +G
Sbjct: 219 LQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMG 278
Query: 1025 CLDEVLTIVSMLSVPSVFFRPKDRAEESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGD 1084
C E+L IVSMLSVP++F+RPK R EESD REKF V ESDHLT L VY QWK + Y
Sbjct: 279 CSSEILLIVSMLSVPAIFYRPKGREEESDQIREKFAVPESDHLTYLNVYLQWKNNNYSTI 338
Query: 1085 WCEEHYLHVKSLRKAREVRSQLLDILKTLKIPLTSSGHDFDVVRKAICSAYFHNAARLKG 1144
WC +H++H K++RK REVR+QL DI+ ++ L S G D+D+VRK IC+AYFH AA+LKG
Sbjct: 339 WCNDHFIHAKAMRKVREVRAQLKDIMVQQRMSLASCGTDWDIVRKCICAAYFHQAAKLKG 398
Query: 1145 VGEYINCRNGMPCHLHPSSAIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGP 1204
+GEY+N R GMPCHLHP+S+++G+GYTP+Y+VYHEL++TTKEYMQC TAV+ +WL+ELGP
Sbjct: 399 IGEYVNIRTGMPCHLHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGP 458
Query: 1205 MFFSVKDSDTSMLEHKKKQKESKTAMEEEMENLRKIQADXXXXXXXXXXXXXXXXXQQVS 1264
MF+SVK + S E++++ KE +AMEEEM L + Q ++
Sbjct: 459 MFYSVKQAGKSRQENRRRAKEEASAMEEEMA-LAEEQLRARRQEQEKRSPLGSVRSTKIY 517
Query: 1265 MPGWR-QGS--TTYLRPKKFGL 1283
PG + QG T P +FGL
Sbjct: 518 TPGRKEQGEPMTPRRTPARFGL 539
>CGD|CAL0000153 [details] [associations]
symbol:orf19.1687 species:5476 "Candida albicans" [GO:0030686
"90S preribosome" evidence=IEA] [GO:0071014 "post-mRNA release
spliceosomal complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000390 "spliceosomal complex disassembly" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0000153 GO:GO:0005524 GO:GO:0003676 EMBL:AACQ01000014
EMBL:AACQ01000013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12820 RefSeq:XP_721644.1
RefSeq:XP_721764.1 STRING:Q5AJA5 GeneID:3636669 GeneID:3636709
KEGG:cal:CaO19.1687 KEGG:cal:CaO19.9255 Uniprot:Q5AJA5
Length = 767
Score = 1307 (465.1 bits), Expect = 2.3e-133, P = 2.3e-133
Identities = 287/723 (39%), Positives = 431/723 (59%)
Query: 546 GE-QGEIDFREDAKFSQHMKKGE----AVSDFA-KSKTLAEQRQYLPIFSVRDELLQVIR 599
GE +G I + A+ +Q ++ G DF K + + R+ LP+ + R+E L++
Sbjct: 49 GEFKGLIRHQTTAEQAQKLEDGPKNPFTGHDFTTKYFDILKTRRDLPVHAQREEFLKIFH 108
Query: 600 ENQXXXXXGETGSGKTTQLTQYLLEDG--YTTNGIVGCTQPRRVAAMSVAKRVSEEMDTE 657
Q GETGSGKTTQ+ Q++L D + T V CTQPRRVAAMSVA RV++EMD E
Sbjct: 109 STQIMVFVGETGSGKTTQIPQFVLYDEMPHLTGKQVACTQPRRVAAMSVAARVADEMDVE 168
Query: 658 LGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVL 717
LG++VGY IRFE+ +GP T++KYMTDG+LLRE ++D DL +Y I++DEAHER+L+TD+L
Sbjct: 169 LGEEVGYNIRFENNSGPKTILKYMTDGMLLREAMEDHDLTRYSCIILDEAHERTLATDIL 228
Query: 718 FGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPIFHIPGRTFPVNTLYSKTPCEDYV 777
G+LK+V RR D K+I+ SATL+A+KF ++F + P+ +PGRT PV Y+ DY+
Sbjct: 229 MGLLKQVSVRRPDLKIIIMSATLDAEKFQNYFNNAPLLAVPGRTHPVEIYYTPEFQRDYL 288
Query: 778 EAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIY 837
+AA++ + IH T GDIL+F+TG++EIE AC + ++L+ + L + P+Y
Sbjct: 289 DAAIRTVLQIHATEGEGDILLFLTGEEEIEDACRKISLEGDELVRE--QNCGPLKVYPLY 346
Query: 838 SQLPADLQAKIFEKAKEGT-------RKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYN 890
LP Q KIFE A RK I++TNIAETSLT+DGI YV+D G+ K KVYN
Sbjct: 347 GSLPPHQQQKIFEPAPTNPNPNGRPGRKVIISTNIAETSLTIDGIVYVVDPGFSKQKVYN 406
Query: 891 PKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLG 950
P++ +++L V P+S C+RLYTE A+ E++ PEI R+NL
Sbjct: 407 PRVRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEEAFKKELIEQSYPEILRSNLS 466
Query: 951 NVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLD 1010
+ V FDFMDPP E ++ ++ +L L L++ G LT LG +FPLD
Sbjct: 467 STVLELKKLGIDDLVHFDFMDPPAPETMMRALEELNYLQCLSDEGDLTALGRLASQFPLD 526
Query: 1011 PPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAAREKFFVQESDHLTLL 1070
P LA ML+ C +E+LTIV+MLSVP+VF RP + +D A+ F + DHLTL+
Sbjct: 527 PMLAVMLIGSPAYSCSEEILTIVAMLSVPNVFVRPASARKRADEAKLSFAQADGDHLTLI 586
Query: 1071 YVYQQW--KEHQYRGD--WCEEHYLHVKSLRKAREVRSQLLDILKTLKIPLTSSGH---D 1123
VY+ + E G WC +++L +SL A+ VR+QL +++ + L S + +
Sbjct: 587 NVYEAFISPEASEIGTHKWCRDNFLSYRSLTSAKNVRNQLQRLMQKYDLQLISQYNQVSE 646
Query: 1124 FDV---VRKAICSAYFHNAARLK-GVGEYINCRNGMPCHLHPSSAIYGLGYTPEYVVYHE 1179
F+ V+KA+ + +F A+ K G Y+ ++ +HPS+ + G E+++Y+E
Sbjct: 647 FEYWENVKKALVAGFFMQVAKKKSGNKGYLTVKDNQDVLIHPSTVLSKEG---EWLIYNE 703
Query: 1180 LILTTKEYMQCATAVEPQWLSELGPMFFSVKDSDTSMLEH--KKKQKESKTAMEEEMENL 1237
+LT+K Y++ T V+P+WL E+ P +++ L+H K K S + E + N+
Sbjct: 704 FVLTSKNYIRTVTVVKPEWLVEIAPKYYN--------LDHFAKGDVKLSLERVVERVGNM 755
Query: 1238 RKI 1240
+K+
Sbjct: 756 KKL 758
>RGD|1311165 [details] [associations]
symbol:Dhx35 "DEAH (Asp-Glu-Ala-His) box polypeptide 35"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA;ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 RGD:1311165 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104241 KO:K13117
OMA:NIFVVPP CTD:60625 EMBL:CH474005 IPI:IPI00764730
RefSeq:NP_001102071.1 UniGene:Rn.118078 Ensembl:ENSRNOT00000021435
GeneID:362260 KEGG:rno:362260 UCSC:RGD:1311165 NextBio:679233
Uniprot:D4AEG5
Length = 679
Score = 1219 (434.2 bits), Expect = 1.1e-131, Sum P(2) = 1.1e-131
Identities = 255/586 (43%), Positives = 359/586 (61%)
Query: 577 TLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNG-IVGC 635
++ +QRQ LP+F +R+ +L ++ Q GETG GK+TQ+ QYL E G+T G +VG
Sbjct: 46 SIEQQRQKLPVFKLRNHILYLVENYQTVVIVGETGCGKSTQVPQYLAEAGWTAEGRVVGV 105
Query: 636 TQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGP-STLIKYMTDGVLLRETLKDS 694
TQPRRVAA++VA RV++E LG +VGY IRF+D T P +T IK++TDG+L+RE + D
Sbjct: 106 TQPRRVAAVTVAGRVADERGAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVDP 165
Query: 695 DLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFG---- 750
L KY V+++DEAHER+L TD+ G+LKK+ +R D +LIV SATL+A+KF DFF
Sbjct: 166 LLTKYSVVMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDAEKFRDFFNQNET 225
Query: 751 SVP------IFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQD 804
S P I + GRTFPV+ Y ++P DY++A V + IH T GDIL F+TGQ+
Sbjct: 226 SDPARDTCVILTVEGRTFPVDIFYLQSPVPDYIKATVDTVVKIHQTEGDGDILAFLTGQE 285
Query: 805 EIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATN 864
E+E L E+ L + ++ L +LP+Y+ LP+ Q K+FE+ RK IVATN
Sbjct: 286 EVETVVSMLIEQARALARTGMKK--HLRVLPMYAGLPSFEQMKVFERVSHSVRKVIVATN 343
Query: 865 IAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCY 924
+AETS+T+ GI YVID G+ K++ YNP+ ++ L V PVS CY
Sbjct: 344 VAETSITISGIVYVIDCGFMKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRNRSGKCY 403
Query: 925 RLYTESAYLNEMLP-SPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMY 983
RLYTE A+ E LP S VPE+QR+NL VV F FM PPP ++++ ++
Sbjct: 404 RLYTEEAF--EQLPQSTVPEMQRSNLAPVVLQLKALGIDSVLRFHFMSPPPAQSMVQALE 461
Query: 984 QLWVLGALNNVGALTD-LGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVF 1042
L+ LG L+ LT+ LG ++ EFPL+P AKMLL GC E+L+I +M+ + +VF
Sbjct: 462 LLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNVF 521
Query: 1043 FRPKDRAEESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREV 1102
P ++ ++ KF V+E DHLT+L VY+ + +H WC+EH+L+ K L +A V
Sbjct: 522 VFPSNQKSQATRVHRKFAVEEGDHLTMLNVYEAFIKHNKSSQWCQEHFLNYKGLVRAATV 581
Query: 1103 RSQLLDILKTLKIPLTSSGHDFDVVRKAICSAYFHNAARLKGVGEY 1148
R QL +L ++P SS D D V + I S +F NAAR G Y
Sbjct: 582 RDQLKKLLVKFQVPKMSSEGDPDPVLRCIVSGFFANAARFHSTGAY 627
Score = 93 (37.8 bits), Expect = 1.1e-131, Sum P(2) = 1.1e-131
Identities = 17/33 (51%), Positives = 24/33 (72%)
Query: 1175 VVYHELILTTKEYMQCATAVEPQWLSELGPMFF 1207
V+Y+E+I T+K YM+ TA+E WL EL P F+
Sbjct: 629 VIYNEVIQTSKYYMRDVTAIESAWLLELAPHFY 661
>UNIPROTKB|E2RQN1 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 EMBL:AAEX03013926
Ensembl:ENSCAFT00000014378 NextBio:20859776 Uniprot:E2RQN1
Length = 698
Score = 1284 (457.0 bits), Expect = 6.4e-131, P = 6.4e-131
Identities = 278/684 (40%), Positives = 400/684 (58%)
Query: 543 AVVGEQGE-IDFREDAKFSQHMKKGEAVSDFAKSKTLAEQRQYLPIFSVRDELLQVIREN 601
+V G +G + E+ + V + + ++ +QRQ LP+F +R+ +L ++
Sbjct: 3 SVTGTEGPGVSISEERQSLAENSATTVVYNPYAALSIEQQRQKLPVFKLRNHILYLVENY 62
Query: 602 QXXXXXGETGSGKTTQLTQYLLEDGYTTNG-IVGCTQPRRVAAMSVAKRVSEEMDTELGD 660
Q GETG GK+TQ+ QYL E G+T G +VG TQPRRVAA++VA RV+EE LG
Sbjct: 63 QTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVTQPRRVAAVTVAGRVAEERGAVLGH 122
Query: 661 KVGYAIRFEDVTGP-STLIKYMTDGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLFG 719
+VGY IRF+D T P +T IK++TDG+L+RE + D L KY I++DEAHER+L TD+ G
Sbjct: 123 EVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVDPLLTKYSAIMLDEAHERTLYTDIAIG 182
Query: 720 ILKKVVARRRDFKLIVTSATLNAQKFSDFFG----SVP------IFHIPGRTFPVNTLYS 769
+LKK+ +R D +L+V SATL+A+KF DFF S P I + GRTFPV+ Y
Sbjct: 183 LLKKIQRKRGDLRLLVASATLDAEKFRDFFNQNETSDPTRDTCVILTVEGRTFPVDIFYL 242
Query: 770 KTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVP 829
++P DY+++ V+ M IH T GDIL F+TGQ+E+E L E+ L T
Sbjct: 243 QSPVPDYIKSTVETVMKIHQTEGDGDILAFLTGQEEVETVVSMLIEQARAL--GRTGMKR 300
Query: 830 ELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVY 889
L +LP+Y+ LP+ Q K+FE+ RK IVATN+AETS+T+ GI YVID G+ K++ Y
Sbjct: 301 HLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAY 360
Query: 890 NPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPS-PVPEIQRTN 948
NP+ ++ L V PVS CYRLYTE A+ + LP VPE+QR+N
Sbjct: 361 NPRTTIECLVVAPVSQASANQRAGRAGRSRSGKCYRLYTEEAF--DKLPQCTVPEMQRSN 418
Query: 949 LGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNVGALTD-LGWKMVEF 1007
L V+ F FM PPP ++++ ++ L+ LG L+ LT+ LG ++ EF
Sbjct: 419 LAPVILQLKALGIDNVLRFHFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRVAEF 478
Query: 1008 PLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAAREKFFVQESDHL 1067
PL+P AKMLL GC E+L+I +M+ + ++F P ++ ++ KF V+E DHL
Sbjct: 479 PLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNIFVVPGNQKSQAIRVHRKFAVEEGDHL 538
Query: 1068 TLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQLLDILKTLKIPLTSSGHDFDVV 1127
T+L VY+ + +H WC+EH+L+ K L +A VR QL +L ++P SS D D V
Sbjct: 539 TMLNVYEAFIKHNKNSQWCQEHFLNYKGLIRAATVREQLKKLLVKFQVPKKSSEGDPDPV 598
Query: 1128 RKAICSAYFHNAARLKGVGEYIN--CRNGMPCHLHPSSAIYGLG--YTPEYVVYHELILT 1183
+ I S +F NAAR G Y +G +H + + G Y V+Y+E+I T
Sbjct: 599 LRCIVSGFFANAARFHSTGAYSRTLAHSGREAQVHLFTVVPGTQSRYWGFRVIYNEVIQT 658
Query: 1184 TKEYMQCATAVEPQWLSELGPMFF 1207
+K YM+ TA+E WL EL P F+
Sbjct: 659 SKYYMRDVTAIESAWLLELAPHFY 682
>CGD|CAL0002409 [details] [associations]
symbol:orf19.5865 species:5476 "Candida albicans" [GO:0071006
"U2-type catalytic step 1 spliceosome" evidence=IEA] [GO:0000349
"generation of catalytic spliceosome for first transesterification
step" evidence=IEA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
CGD:CAL0002409 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AACQ01000003 EMBL:AACQ01000004
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K12814 RefSeq:XP_722935.1 RefSeq:XP_723081.1 GeneID:3635187
GeneID:3635307 KEGG:cal:CaO19.13287 KEGG:cal:CaO19.5865
Uniprot:Q5ANN5
Length = 865
Score = 1239 (441.2 bits), Expect = 4.2e-130, Sum P(2) = 4.2e-130
Identities = 253/592 (42%), Positives = 369/592 (62%)
Query: 580 EQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNG-IVGCTQP 638
E R+ LP++S R+E L++I ENQ GETGSGKTTQL QYL E GY+ N ++ CTQP
Sbjct: 224 EVRKSLPVYSYREEFLKIINENQTLIVVGETGSGKTTQLPQYLHEAGYSRNNQVIACTQP 283
Query: 639 RRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPS-TLIKYMTDGVLLRETLKDSDLD 697
RRVAA SVA RV+ EM +LG++VGY IRF+D T+IKY+TDG+LLRE L+D L
Sbjct: 284 RRVAATSVANRVANEMQVKLGEQVGYNIRFDDNCKDGVTVIKYVTDGMLLREFLQDPTLG 343
Query: 698 KYRVIVMDEAHERSLSTDVLFGILKKVV--ARRRDFKLIVTSATLNAQKFSDFFGSVPIF 755
KY I++DEAHER+LST++L +LK V+ R+ D K+I+ SAT+NA+KFS FF + PI
Sbjct: 344 KYSAIMIDEAHERTLSTEILLSLLKDVMMTTRKDDLKIIIASATINAEKFSQFFNNAPIL 403
Query: 756 HIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSP-PGDILIFMTGQDEIEAACFALK 814
+IPGR FPV Y+K P +Y++AA+ IH+T P PGDIL+F+TGQDEIE ++
Sbjct: 404 NIPGRRFPVKIHYTKQPEANYIQAAITTIFQIHMTQPLPGDILVFLTGQDEIET----ME 459
Query: 815 ERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDG 874
E + I ++ +++ IY+ LP +LQ KIF+ TRK ++ATNIAETS+T+DG
Sbjct: 460 EILRDSILKLGDQIDPMIVCSIYANLPQELQQKIFQPTPSNTRKIVLATNIAETSITIDG 519
Query: 875 IFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLN 934
I YVID GY K VYNP GM++L V P S C+RL+T+ ++ N
Sbjct: 520 ISYVIDPGYVKQNVYNPTTGMESLVVVPCSRASADQRAGRAGRVGPGKCFRLFTKWSFYN 579
Query: 935 EMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNV 994
E+ + PEIQR NL +V+ F+FMDPP +E I+ ++ L+ LGALN
Sbjct: 580 ELDSNQQPEIQRVNLTSVILLLLSLGINDLLGFEFMDPPSKEAIIKALNLLYALGALNTQ 639
Query: 995 GALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPS-VFFRPKDRAEESD 1053
G LT G KM EFPLDP K +L ++ ++++I++ML+ S +F+RPKD+ E +D
Sbjct: 640 GKLTKTGKKMSEFPLDPVFTKCILTSDKFDNTKQIISIIAMLNESSNLFYRPKDKKELAD 699
Query: 1054 AAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQLLDILKTL 1113
+++F + D LL ++QQW + Y WC+++++ K++++ + + QL+ + K +
Sbjct: 700 KRKQEFNDLQGDQFMLLKIWQQWVDSGYSVQWCQDYFIQYKTMKRIKNIYEQLIRLSKKI 759
Query: 1114 KIPLTSSGHDFD----------VVRKAICSAYFHNAARLKGVGE-YINCRNG 1154
I + S D ++ K + S +F+N +L +G+ Y NG
Sbjct: 760 GIEVNSRHQHRDHLQENTDNNTLLTKCLISGFFNNIVKLSPMGDCYQKLTNG 811
Score = 271 (100.5 bits), Expect = 4.8e-20, Sum P(2) = 4.8e-20
Identities = 54/178 (30%), Positives = 102/178 (57%)
Query: 1040 SVFFRPKDRAEESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKA 1099
++F+RPKD+ E +D +++F + D LL ++QQW + Y WC+++++ K++++
Sbjct: 686 NLFYRPKDKKELADKRKQEFNDLQGDQFMLLKIWQQWVDSGYSVQWCQDYFIQYKTMKRI 745
Query: 1100 REVRSQLLDILKTLKIPLTSSGHDFD----------VVRKAICSAYFHNAARLKGVGE-Y 1148
+ + QL+ + K + I + S D ++ K + S +F+N +L +G+ Y
Sbjct: 746 KNIYEQLIRLSKKIGIEVNSRHQHRDHLQENTDNNTLLTKCLISGFFNNIVKLSPMGDCY 805
Query: 1149 INCRNGM-----PCHLHPSSAIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSE 1201
NG PC++HPSS IY L P+Y++Y+EL+LT+KEYM+ ++ + + E
Sbjct: 806 QKLTNGKGGNNTPCYIHPSSCIYKLKPKPKYLLYYELVLTSKEYMRNCIILDEKLIKE 863
Score = 58 (25.5 bits), Expect = 4.2e-130, Sum P(2) = 4.2e-130
Identities = 17/54 (31%), Positives = 27/54 (50%)
Query: 81 EEEKSESSGI---DEVVSNATNG-KRSHASRRYRETSARDITDAENPMAVGRAG 130
EEE+ E SGI D ++ N + ++S YRE + I + + + VG G
Sbjct: 202 EEEEEEESGIRDSDSIIGNKYDEVRKSLPVYSYREEFLKIINENQTLIVVGETG 255
Score = 40 (19.1 bits), Expect = 3.4e-128, Sum P(2) = 3.4e-128
Identities = 9/23 (39%), Positives = 16/23 (69%)
Query: 420 ITADNHQWEER-QLLRSGAVRGT 441
I AD+++ EER Q+ + G ++ T
Sbjct: 17 IDADDNEEEEREQITQQGPLKAT 39
>UNIPROTKB|Q5THR1 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
EMBL:AL023803 UniGene:Hs.444520 HGNC:HGNC:15861 IPI:IPI00642913
SMR:Q5THR1 Ensembl:ENST00000373325 Uniprot:Q5THR1
Length = 679
Score = 1201 (427.8 bits), Expect = 8.8e-130, Sum P(2) = 8.8e-130
Identities = 251/586 (42%), Positives = 357/586 (60%)
Query: 577 TLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNG-IVGC 635
++ +QRQ LP+F +R+ +L +I Q GETG GK+TQ+ QYL E G+T G +VG
Sbjct: 46 SIEQQRQKLPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGV 105
Query: 636 TQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGP-STLIKYMTDGVLLRETLKDS 694
TQPRRVAA++VA RV+EE LG +VGY IRF+D T +T IK++TDG+L+RE + D
Sbjct: 106 TQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATRIKFLTDGMLVREMMVDP 165
Query: 695 DLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFG---- 750
L KY VI++DEAHER+L TD+ G+LKK+ +R D +LIV SATL+A KF DFF
Sbjct: 166 LLTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDADKFRDFFNQNET 225
Query: 751 SVP------IFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQD 804
S P I + GRTFPV+ Y ++P DY+++ V+ + IH T GD+L F+TGQ+
Sbjct: 226 SDPARDTCVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVVKIHQTEGDGDVLAFLTGQE 285
Query: 805 EIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATN 864
E+E L E+ L + + L +LP+Y+ LP+ Q K+FE+ RK IVATN
Sbjct: 286 EVETVVSMLIEQARALARTGMKR--HLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATN 343
Query: 865 IAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCY 924
+AETS+T+ GI YVID G+ K++ YNP+ ++ L V PVS CY
Sbjct: 344 VAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRSRSGKCY 403
Query: 925 RLYTESAYLNEMLP-SPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMY 983
RLYTE A+ + LP S VPE+QR+NL V+ F FM PPP ++++ ++
Sbjct: 404 RLYTEEAF--DKLPQSTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQALE 461
Query: 984 QLWVLGALNNVGALTD-LGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVF 1042
L+ LG L+ LT+ LG ++ EFPL+P AKMLL GC E+L+I +M+ + ++F
Sbjct: 462 LLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNIF 521
Query: 1043 FRPKDRAEESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREV 1102
P ++ + KF V+E DHLT+L +Y+ + +H WC+EH+L+ K L +A V
Sbjct: 522 VVPPNQKSHAIRVHRKFAVEEGDHLTMLNIYEAFIKHNKDSKWCQEHFLNYKGLVRAATV 581
Query: 1103 RSQLLDILKTLKIPLTSSGHDFDVVRKAICSAYFHNAARLKGVGEY 1148
R QL +L ++P SS D D+V + I S +F NAAR G Y
Sbjct: 582 REQLKKLLVKFQVPRKSSEGDPDLVLRCIVSGFFANAARFHSTGAY 627
Score = 93 (37.8 bits), Expect = 8.8e-130, Sum P(2) = 8.8e-130
Identities = 17/33 (51%), Positives = 24/33 (72%)
Query: 1175 VVYHELILTTKEYMQCATAVEPQWLSELGPMFF 1207
V+Y+E+I T+K YM+ TA+E WL EL P F+
Sbjct: 629 VIYNEVIQTSKYYMRDVTAIESAWLLELAPHFY 661
>UNIPROTKB|E2RQN7 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:AAEX03013926
Ensembl:ENSCAFT00000014371 Uniprot:E2RQN7
Length = 702
Score = 1272 (452.8 bits), Expect = 1.2e-129, P = 1.2e-129
Identities = 270/645 (41%), Positives = 389/645 (60%)
Query: 577 TLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNG-IVGC 635
++ +QRQ LP+F +R+ +L ++ Q GETG GK+TQ+ QYL E G+T G +VG
Sbjct: 46 SIEQQRQKLPVFKLRNHILYLVENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGV 105
Query: 636 TQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGP-STLIKYMTDGVLLRETLKDS 694
TQPRRVAA++VA RV+EE LG +VGY IRF+D T P +T IK++TDG+L+RE + D
Sbjct: 106 TQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVDP 165
Query: 695 DLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFG---- 750
L KY I++DEAHER+L TD+ G+LKK+ +R D +L+V SATL+A+KF DFF
Sbjct: 166 LLTKYSAIMLDEAHERTLYTDIAIGLLKKIQRKRGDLRLLVASATLDAEKFRDFFNQNET 225
Query: 751 SVP------IFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQD 804
S P I + GRTFPV+ Y ++P DY+++ V+ M IH T GDIL F+TGQ+
Sbjct: 226 SDPTRDTCVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVMKIHQTEGDGDILAFLTGQE 285
Query: 805 EIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATN 864
E+E L E+ L T L +LP+Y+ LP+ Q K+FE+ RK IVATN
Sbjct: 286 EVETVVSMLIEQARAL--GRTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATN 343
Query: 865 IAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCY 924
+AETS+T+ GI YVID G+ K++ YNP+ ++ L V PVS CY
Sbjct: 344 VAETSITISGIVYVIDCGFVKLRAYNPRTTIECLVVAPVSQASANQRAGRAGRSRSGKCY 403
Query: 925 RLYTESAYLNEMLPS-PVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMY 983
RLYTE A+ + LP VPE+QR+NL V+ F FM PPP ++++ ++
Sbjct: 404 RLYTEEAF--DKLPQCTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQALE 461
Query: 984 QLWVLGALNNVGALTD-LGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVF 1042
L+ LG L+ LT+ LG ++ EFPL+P AKMLL GC E+L+I +M+ + ++F
Sbjct: 462 LLYALGGLDKDCRLTEPLGMRVAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNIF 521
Query: 1043 FRPKDRAEESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREV 1102
P ++ ++ KF V+E DHLT+L VY+ + +H WC+EH+L+ K L +A V
Sbjct: 522 VVPGNQKSQAIRVHRKFAVEEGDHLTMLNVYEAFIKHNKNSQWCQEHFLNYKGLIRAATV 581
Query: 1103 RSQLLDILKTLKIPLTSSGHDFDVVRKAICSAYFHNAARLKGVGEYINCRNGMPCHLHPS 1162
R QL +L ++P SS D D V + I S +F NAAR G Y + +L+
Sbjct: 582 REQLKKLLVKFQVPKKSSEGDPDPVLRCIVSGFFANAARFHSTGAYSVILSPHSLYLYYL 641
Query: 1163 SAIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFF 1207
+ ++ + + V+Y+E+I T+K YM+ TA+E WL EL P F+
Sbjct: 642 T-LFNRKFLQK-VIYNEVIQTSKYYMRDVTAIESAWLLELAPHFY 684
>UNIPROTKB|Q9H6R0 [details] [associations]
symbol:DHX33 "Putative ATP-dependent RNA helicase DHX33"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IEA]
[GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=IDA] [GO:0000182
"rDNA binding" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:CH471108 GO:GO:0005654
GO:GO:0005730 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0000182 GO:GO:0045943 HOVERGEN:HBG039428
EMBL:AK025625 EMBL:AK026944 EMBL:AK295074 EMBL:AC004148
EMBL:BC030017 EMBL:CR936655 IPI:IPI00302860 IPI:IPI00655950
RefSeq:NP_001186628.1 RefSeq:NP_064547.2 UniGene:Hs.250456
ProteinModelPortal:Q9H6R0 SMR:Q9H6R0 IntAct:Q9H6R0
PhosphoSite:Q9H6R0 DMDM:296434478 PRIDE:Q9H6R0
Ensembl:ENST00000225296 GeneID:56919 KEGG:hsa:56919 UCSC:uc002gbz.3
CTD:56919 GeneCards:GC17M005360 HGNC:HGNC:16718 MIM:614405
neXtProt:NX_Q9H6R0 PharmGKB:PA27220 InParanoid:Q9H6R0 OMA:APDYFRR
OrthoDB:EOG46Q6S1 PhylomeDB:Q9H6R0 ChiTaRS:DHX33 GenomeRNAi:56919
NextBio:62420 ArrayExpress:Q9H6R0 Bgee:Q9H6R0 CleanEx:HS_DHX33
Genevestigator:Q9H6R0 GermOnline:ENSG00000005100 Uniprot:Q9H6R0
Length = 707
Score = 1269 (451.8 bits), Expect = 2.5e-129, P = 2.5e-129
Identities = 270/639 (42%), Positives = 374/639 (58%)
Query: 581 QRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNGIVGCTQPRR 640
QR+ LPIF R +LL +R GETGSGKTTQ+ QYL E G + GI+ TQPRR
Sbjct: 70 QRRSLPIFQARGQLLAQLRNLDNAVLIGETGSGKTTQIPQYLYEGGISRQGIIAVTQPRR 129
Query: 641 VAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDSDLDKYR 700
VAA+S+A RVS+E TELG VGY +RF+DVT T IK++TDG+LLRE + DS L KY
Sbjct: 130 VAAISLATRVSDEKRTELGKLVGYTVRFDDVTSEDTRIKFLTDGMLLREAISDSLLRKYS 189
Query: 701 VIVMDEAHERSLSTDVLFGILKKVVARRRDF-----KLIVTSATLNAQKFSDFFGSVPIF 755
+++DEAHER++ TDVLFG++K RR++ K+IV SAT++ FS +F P+
Sbjct: 190 CVILDEAHERTIHTDVLFGVVKAAQKRRKELGKLPLKVIVMSATMDVDLFSQYFNGAPVL 249
Query: 756 HIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPG-DILIFMTGQDEIEAACFALK 814
++ GR P+ Y+K P DY+ AA+ IH +P DIL+F+TGQ+EIEA +
Sbjct: 250 YLEGRQHPIQVFYTKQPQNDYLHAALVSVFQIHQEAPSSQDILVFLTGQEEIEAMSKTCR 309
Query: 815 ERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDG 874
+ + L P +L+LP+Y+ LP Q ++F+ A +G RK I++TNIAETS+T+ G
Sbjct: 310 DIAKHLPDGC----PAMLVLPLYASLPYAQQLRVFQGAPKGYRKVIISTNIAETSITITG 365
Query: 875 IFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLN 934
I YV+DTG K K YNP G++ L V VS CYRLYTE +
Sbjct: 366 IKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRTGRAGREDSGICYRLYTEDEF-E 424
Query: 935 EMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNV 994
+ VPEIQR NL +V+ FDFM P ++I ++ QL +LGAL +
Sbjct: 425 KFDKMTVPEIQRCNLASVMLQLLAMKVPNVLTFDFMSKPSPDHIQAAIAQLDLLGALEHK 484
Query: 995 G---ALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEE 1051
LT +G KM FPL+P AK +LM + C +E+LTIVS+LSV SV P R EE
Sbjct: 485 DDQLTLTPMGRKMAAFPLEPKFAKTILMSPKFHCTEEILTIVSLLSVDSVLHNPPSRREE 544
Query: 1052 SDAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQLLDILK 1111
R+KF E DH+TLL +Y+ +K DWC+E++++ K++ EVR+QL DI
Sbjct: 545 VQGVRKKFISSEGDHMTLLNIYRTFKNLGGNKDWCKENFVNSKNMTLVAEVRAQLRDICL 604
Query: 1112 TLKIPLTSSGHDFDVVRKAICSAYFHNAARLKGVGEYINCRNGMPCHLHPSSAIYGLGYT 1171
+ +P+ SS D + VR+ + + F + A L+ G Y P +HPSS ++
Sbjct: 605 KMSMPIASSRGDVESVRRCLAHSLFMSTAELQPDGTYATTDTHQPVAIHPSSVLFHC--K 662
Query: 1172 PEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFFSVK 1210
P VVY EL+ T K YM+ ++ QWL E P +F K
Sbjct: 663 PACVVYTELLYTNKCYMRDLCVIDAQWLYEAAPEYFRRK 701
>MGI|MGI:2445102 [details] [associations]
symbol:Dhx33 "DEAH (Asp-Glu-Ala-His) box polypeptide 33"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000182 "rDNA binding" evidence=ISO;IDA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=ISO;IDA] [GO:0005730 "nucleolus"
evidence=ISO;IDA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IPI]
[GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=ISO;IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:2445102
GO:GO:0005524 GO:GO:0005654 GO:GO:0005730 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 GO:GO:0000182
GO:GO:0045943 HOVERGEN:HBG039428 GeneTree:ENSGT00700000104241
CTD:56919 OMA:APDYFRR ChiTaRS:DHX33 EMBL:AK035177 EMBL:BC052172
IPI:IPI00410764 RefSeq:NP_848144.3 UniGene:Mm.35399
ProteinModelPortal:Q80VY9 SMR:Q80VY9 PhosphoSite:Q80VY9
PRIDE:Q80VY9 Ensembl:ENSMUST00000108527 GeneID:216877
KEGG:mmu:216877 InParanoid:Q80VY9 NextBio:375442 Bgee:Q80VY9
CleanEx:MM_DHX33 Genevestigator:Q80VY9
GermOnline:ENSMUSG00000040620 Uniprot:Q80VY9
Length = 698
Score = 1264 (450.0 bits), Expect = 8.4e-129, P = 8.4e-129
Identities = 269/644 (41%), Positives = 377/644 (58%)
Query: 576 KTLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNGIVGC 635
+ L QR+ LPIF R +LL +R GETGSGKTTQ+ QYL E G + GI+
Sbjct: 56 EALELQRRSLPIFRARGQLLAQLRNLDNAVLIGETGSGKTTQIPQYLYEGGISRQGIIAV 115
Query: 636 TQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDSD 695
TQPRRVAA+S+A RVS+E TELG VGY +RFEDVT T IK++TDG+LLRE + DS
Sbjct: 116 TQPRRVAAISLATRVSDEKRTELGKLVGYTVRFEDVTSEDTRIKFLTDGMLLREAISDSL 175
Query: 696 LDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDF-----KLIVTSATLNAQKFSDFFG 750
L KY +++DEAHER++ TDVLFG++K RR++ K+IV SAT++ FS +F
Sbjct: 176 LRKYSCVILDEAHERTIHTDVLFGVVKTAQKRRKELGKLPLKVIVMSATMDVDLFSQYFN 235
Query: 751 SVPIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPG-DILIFMTGQDEIEAA 809
P+ ++ GR P+ Y+K P +DY+ AA+ IH +P DIL+F+TGQ+EIEA
Sbjct: 236 RAPVLYLEGRQHPIQIFYTKQPQQDYLHAALVSVFQIHQEAPASQDILVFLTGQEEIEAM 295
Query: 810 CFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETS 869
++ L P +L+LP+Y+ LP Q ++F+ A +G RK I++TNIAETS
Sbjct: 296 SKTCRDIARHLPDGC----PSMLVLPLYASLPYSQQLRVFQGAPKGYRKVIISTNIAETS 351
Query: 870 LTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTE 929
+T+ GI YV+DTG K K YNP G++ L V VS CYRLYTE
Sbjct: 352 ITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRTGRAGREDSGICYRLYTE 411
Query: 930 SAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLG 989
+ + VPEIQR NL +V+ FDFM P ++I ++ QL +LG
Sbjct: 412 DEF-EKFEKMTVPEIQRCNLASVILQLLAMKVPNVLTFDFMSKPSPDHIEAAIAQLDLLG 470
Query: 990 ALNNVG---ALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPK 1046
AL + LT +G KM FPL+P AK +L+ + C +E+LTIVS+LSV SV + P
Sbjct: 471 ALEHKDDQLTLTPIGRKMAAFPLEPRFAKTILLSSKFHCTEEILTIVSLLSVDSVLYNPP 530
Query: 1047 DRAEESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQL 1106
R +E + R+KF E DH+TLL +Y+ +K DWC+E++++ K++ EVR+QL
Sbjct: 531 ARRDEVQSVRKKFISSEGDHITLLNIYRTFKNIGGNKDWCKENFVNSKNMLLVAEVRAQL 590
Query: 1107 LDILKTLKIPLTSSGHDFDVVRKAICSAYFHNAARLKGVGEYINCRNGMPCHLHPSSAIY 1166
+I + +P+ SS D + VR+ + + F N A L+ G Y P +HPSS ++
Sbjct: 591 REICLKMSMPIMSSRGDMESVRRCMAHSLFMNTAELQTDGTYATTDTHQPVAIHPSSVLF 650
Query: 1167 GLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFFSVK 1210
P VVY L+ T K YM+ V+ +WL E P +F K
Sbjct: 651 HC--KPACVVYTSLLYTNKCYMRDLCVVDAEWLYEAAPDYFRRK 692
>UNIPROTKB|F1MWZ4 [details] [associations]
symbol:F1MWZ4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=IEA] [GO:0033613 "activating
transcription factor binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0000182
"rDNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005654 GO:GO:0005730
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:DAAA02048722
IPI:IPI00693412 Ensembl:ENSBTAT00000016932 Uniprot:F1MWZ4
Length = 714
Score = 1260 (448.6 bits), Expect = 2.2e-128, P = 2.2e-128
Identities = 266/644 (41%), Positives = 378/644 (58%)
Query: 576 KTLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNGIVGC 635
+ + +QR+ LPIF R +LL +R GETGSGKTTQ+ QYL E G I+
Sbjct: 72 EAVEQQRRNLPIFQARGQLLAQLRNLDSAVLIGETGSGKTTQIPQYLYEGGIGRQAIIAV 131
Query: 636 TQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDSD 695
TQPRRVAA+S+A RVS+E TELG VGY +RF+DVT T IK++TDG+LLRE + D
Sbjct: 132 TQPRRVAAISLATRVSDEKRTELGKLVGYTVRFDDVTSDDTKIKFLTDGMLLREAISDCL 191
Query: 696 LDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDF-----KLIVTSATLNAQKFSDFFG 750
L KY I++DEAHER+L TDVLFG++K RR++ K++V SAT++ FS +F
Sbjct: 192 LRKYSCIILDEAHERTLHTDVLFGVVKAAQKRRKELGKLPLKVLVMSATMDVDLFSQYFN 251
Query: 751 SVPIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPG-DILIFMTGQDEIEAA 809
P+ ++ GR P+ Y+K P DY+ AA+ IH +P DIL+F+TGQ+EIEA
Sbjct: 252 GAPVLYLEGRQHPIQIFYTKQPQHDYLHAALVSVFQIHQEAPSSHDILVFLTGQEEIEAM 311
Query: 810 CFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETS 869
++ + L P +L+LP+Y+ LP Q ++F++A +G RK I++TNIAETS
Sbjct: 312 SKTCRDIAKHLPDGC----PSMLVLPLYASLPYAQQLRVFQRAPKGYRKVIISTNIAETS 367
Query: 870 LTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTE 929
+T+ GI YV+DTG K K YNP G++ L V VS CYRLYTE
Sbjct: 368 ITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRTGRAGREDSGICYRLYTE 427
Query: 930 SAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLG 989
+ + VPEIQR NL +V+ FDFM P ++I ++ QL +LG
Sbjct: 428 DEF-EKFEKMTVPEIQRCNLASVMLQLLAMKIPNVLTFDFMSKPSPDHIQAAIAQLELLG 486
Query: 990 ALNNVGA---LTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPK 1046
AL + LT +G KM FPL+P AK +L+ + C +E+LTIV++LSV S+ + P
Sbjct: 487 ALEHRDGQLTLTPMGRKMAAFPLEPKFAKTILLSPKFHCTEEILTIVALLSVDSILYNPP 546
Query: 1047 DRAEESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQL 1106
R +E + R+KF E DHLTLL VY+ +K +WC+E++++ K++ EVR+QL
Sbjct: 547 SRRDEVQSVRKKFVSSEGDHLTLLNVYRTFKNTGGNKEWCKENFVNSKNMMLVAEVRAQL 606
Query: 1107 LDILKTLKIPLTSSGHDFDVVRKAICSAYFHNAARLKGVGEYINCRNGMPCHLHPSSAIY 1166
DI + +P+ SS D + +R+ + + F + A L+ G Y P +HPSS ++
Sbjct: 607 RDICIKMSMPIVSSRGDTESIRRCLAHSLFTSTAELQPDGSYATTDTHQPVAIHPSSVLF 666
Query: 1167 GLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFFSVK 1210
P VVY EL+ T+K YM+ V+ +WL E P FF K
Sbjct: 667 HC--KPACVVYTELLFTSKCYMRDLCVVDAEWLYEAAPDFFRKK 708
>UNIPROTKB|Q5JP46 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AL845353 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOVERGEN:HBG039428 UniGene:Hs.485060
HGNC:HGNC:2739 IPI:IPI00292510 SMR:Q5JP46 Ensembl:ENST00000383576
UCSC:uc011ijt.2 Uniprot:Q5JP46
Length = 560
Score = 1244 (443.0 bits), Expect = 1.1e-126, P = 1.1e-126
Identities = 243/535 (45%), Positives = 346/535 (64%)
Query: 701 VIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPIFHIPGR 760
V+++DEAHER+L TD+LFG++K V R + K++V SAT++ +FS FF P+F IPGR
Sbjct: 35 VVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATMDTARFSTFFDGAPVFRIPGR 94
Query: 761 TFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQL 820
FPV+ Y+K P DY+EA V + IH+T PPGDIL+F+TGQ+EIEAAC L++R +L
Sbjct: 95 RFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRL 154
Query: 821 ISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVID 880
S ++ ELL+LPIY+ LP+D+QA+IF+ G RK +VATNIAETSLT++GI YV+D
Sbjct: 155 GS----KIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLD 210
Query: 881 TGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSP 940
G+ K K YNP+ GM++L V P S C+RLYT AY +E+ +
Sbjct: 211 PGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELEETT 270
Query: 941 VPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNVGALTDL 1000
VPEIQRT+LGNVV FDF+DPPP E +L ++ QL+ LGALN++G LT
Sbjct: 271 VPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALNHLGELTTS 330
Query: 1001 GWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVP-SVFFRPKDRAEESDAAREKF 1059
G KM E P+DP L+KM+L E+ C +E+LT+ +MLSV S+F+RPKD+ +D AR F
Sbjct: 331 GRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARVNF 390
Query: 1060 FVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQLLDILKTLKIPLTS 1119
F+ DHL LL VY QW E Y WC E+++ +S+R+AR+VR QL +L+ +++ L+S
Sbjct: 391 FLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGLSS 450
Query: 1120 SGHDFDVVRKAICSAYFHNAARLKGVGEYINCRNGMPCHLHPSSAIYGLGYTPEYVVYHE 1179
D+ VRKAI + YF++ ARL G Y + +HP+S+++ P +++YHE
Sbjct: 451 CQGDYIRVRKAITAGYFYHTARLTRSG-YRTVKQQQTVFIHPNSSLFE--QQPRWLLYHE 507
Query: 1180 LILTTKEYMQCATAVEPQWLSELGPMFFSVKDSDTSMLEHKKKQKESKTAMEEEM 1234
L+LTTKE+M+ +E WL E+ P ++ K+ + H KK + EE+
Sbjct: 508 LVLTTKEFMRQVLEIESSWLLEVAPHYYKAKELEDP---HAKKMPKKIGKTREEL 559
>UNIPROTKB|Q5SQH5 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:CH471081 GO:GO:0003676 EMBL:BX119957 EMBL:CR753328
EMBL:CR759778 EMBL:AL732442 EMBL:BX908728 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
UniGene:Hs.485060 HGNC:HGNC:2739 EMBL:CR788240 EMBL:AL662798
EMBL:CU013522 IPI:IPI00644906 SMR:Q5SQH5 Ensembl:ENST00000376437
Ensembl:ENST00000414052 Ensembl:ENST00000445379
Ensembl:ENST00000449861 Ensembl:ENST00000451748
Ensembl:ENST00000453879 UCSC:uc003nqy.3 Uniprot:Q5SQH5
Length = 560
Score = 1244 (443.0 bits), Expect = 1.1e-126, P = 1.1e-126
Identities = 243/535 (45%), Positives = 346/535 (64%)
Query: 701 VIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPIFHIPGR 760
V+++DEAHER+L TD+LFG++K V R + K++V SAT++ +FS FF P+F IPGR
Sbjct: 35 VVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATMDTARFSTFFDDAPVFRIPGR 94
Query: 761 TFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQL 820
FPV+ Y+K P DY+EA V + IH+T PPGDIL+F+TGQ+EIEAAC L++R +L
Sbjct: 95 RFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRL 154
Query: 821 ISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVID 880
S ++ ELL+LPIY+ LP+D+QA+IF+ G RK +VATNIAETSLT++GI YV+D
Sbjct: 155 GS----KIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLD 210
Query: 881 TGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSP 940
G+ K K YNP+ GM++L V P S C+RLYT AY +E+ +
Sbjct: 211 PGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELEETT 270
Query: 941 VPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNVGALTDL 1000
VPEIQRT+LGNVV FDF+DPPP E +L ++ QL+ LGALN++G LT
Sbjct: 271 VPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALNHLGELTTS 330
Query: 1001 GWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVP-SVFFRPKDRAEESDAAREKF 1059
G KM E P+DP L+KM+L E+ C +E+LT+ +MLSV S+F+RPKD+ +D AR F
Sbjct: 331 GRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARVNF 390
Query: 1060 FVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQLLDILKTLKIPLTS 1119
F+ DHL LL VY QW E Y WC E+++ +S+R+AR+VR QL +L+ +++ L+S
Sbjct: 391 FLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGLSS 450
Query: 1120 SGHDFDVVRKAICSAYFHNAARLKGVGEYINCRNGMPCHLHPSSAIYGLGYTPEYVVYHE 1179
D+ VRKAI + YF++ ARL G Y + +HP+S+++ P +++YHE
Sbjct: 451 CQGDYIRVRKAITAGYFYHTARLTRSG-YRTVKQQQTVFIHPNSSLFE--QQPRWLLYHE 507
Query: 1180 LILTTKEYMQCATAVEPQWLSELGPMFFSVKDSDTSMLEHKKKQKESKTAMEEEM 1234
L+LTTKE+M+ +E WL E+ P ++ K+ + H KK + EE+
Sbjct: 508 LVLTTKEFMRQVLEIESSWLLEVAPHYYKAKELEDP---HAKKMPKKIGKTREEL 559
>TAIR|locus:2197965 [details] [associations]
symbol:AT1G26370 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
IPI:IPI00532541 RefSeq:NP_173961.3 UniGene:At.15978
ProteinModelPortal:F4IE66 SMR:F4IE66 PRIDE:F4IE66
EnsemblPlants:AT1G26370.1 GeneID:839179 KEGG:ath:AT1G26370
OMA:ADISTNI Uniprot:F4IE66
Length = 717
Score = 825 (295.5 bits), Expect = 2.7e-126, Sum P(2) = 2.7e-126
Identities = 181/509 (35%), Positives = 293/509 (57%)
Query: 719 GILKKVVARRRD-FKLIVTSATLNAQKFSDFFGSVPIFHIPGRTFPVNTLYSKTPCEDYV 777
G+LK R+ KLI+ SA+L+A+ FS++FG H+ GR FPV+ LY+ P DYV
Sbjct: 216 GVLKGYQGRKLSPLKLIIMSASLDARVFSEYFGGAKAVHVQGRQFPVDILYTVHPESDYV 275
Query: 778 EAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIY 837
+A + IH PGDIL+F+TGQDEIE+ ++ER++ + + +LL L I+
Sbjct: 276 DATLVTIFQIHFEEKPGDILVFLTGQDEIESVERLVQERLQNI----PEDKRKLLPLAIF 331
Query: 838 SQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDA 897
S LP++ Q K+F A G RK I+ATNIAETS+T+ GI YVID G+ K + Y+P GM++
Sbjct: 332 SALPSEQQMKVFAPAPTGFRKVILATNIAETSITIPGIRYVIDPGFVKARSYDPSKGMES 391
Query: 898 LQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXX 957
L V P S +RLY E + ++ S PEI+R NL N++
Sbjct: 392 LDVVPASKAQTLQRSGRAGREGPGKSFRLYPEREF-EKLEDSTKPEIKRCNLSNIILQLK 450
Query: 958 XXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNVGALTD-LGWKMVEFPLDPPLAKM 1016
FDF+D P + I+ ++ +L LGAL + G L + +G++M PL+P +K
Sbjct: 451 ALGIDDIVGFDFIDKPSRGAIIKALAELHSLGALADDGKLENPVGYQMSRLPLEPVYSKA 510
Query: 1017 LLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAAREKFFVQESDHLTLLYVYQQW 1076
L++ Q CL+E+L V++LSV S+F+ P+++ EE+ ++ F E DHLT L VY++
Sbjct: 511 LILANQFNCLEEMLITVAVLSVESIFYDPREKREEARTSKNHFASVEGDHLTYLSVYRES 570
Query: 1077 KEHQYR------GD--------WCEEHYLHVKSLRKAREVRSQLLDILKTLKIPLTSSGH 1122
E + G+ WC+E+Y++ +SL+ AR++ Q+ + ++ + ++S G+
Sbjct: 571 DEFLEKRKAAGSGNNIDKIMKKWCKENYVNSRSLKHARDIYRQIREHVEQIGFNVSSCGN 630
Query: 1123 DFDVVRKAICSAYFHNAARLKGVGEYINCRNGMPCHLHPSSAIYGLGYTPEYVVYHELIL 1182
D R+ + +++F AA+ + G Y +G H+HP+S ++ PE V+++EL+
Sbjct: 631 DMLAFRRCLAASFFLKAAQRQLDGTYRALESGEVVHIHPTSVLFRA--KPECVIFNELMQ 688
Query: 1183 TTKEYMQCATAVEPQWLSELGPMFFSVKD 1211
T+K+Y++ T ++ WLSEL P F +
Sbjct: 689 TSKKYIKNLTIIDSLWLSELAPHHFQTAE 717
Score = 443 (161.0 bits), Expect = 2.7e-126, Sum P(2) = 2.7e-126
Identities = 91/182 (50%), Positives = 125/182 (68%)
Query: 548 QGEIDFREDAKFSQHMKKGEAVSDFAKSKTLAEQRQYLPIFSVRDELLQVIRENQXXXXX 607
QGE+ + + S+ K VS F+ + +AE R+ LPI SV L++ +++N
Sbjct: 6 QGEL--KSFVQNSRPNPKSPTVSPFSMRQKIAEHRRSLPIASVEKRLVEEVQKNDILIIV 63
Query: 608 GETGSGKTTQLTQYLLEDGYTTNG-IVGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAI 666
GETGSGKTTQL Q+L G+ G ++G TQPRR+AA++VAKRV+EE + +LG KVGY+I
Sbjct: 64 GETGSGKTTQLPQFLYNAGFCREGKMIGITQPRRIAAVTVAKRVAEECEVQLGQKVGYSI 123
Query: 667 RFEDVTGPSTLIKYMTDGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVA 726
RF+D T ST +KYMTDG+LLRE L D L +Y VI++DEAH+RS+ TDVL +LKK+
Sbjct: 124 RFDDTTSGSTRLKYMTDGLLLREALLDPHLSRYSVIIVDEAHDRSVHTDVLLALLKKIQR 183
Query: 727 RR 728
R
Sbjct: 184 TR 185
>UNIPROTKB|F5GXM6 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K13117 EMBL:AL023803
UniGene:Hs.444520 DNASU:60625 GeneID:60625 KEGG:hsa:60625 CTD:60625
HGNC:HGNC:15861 GenomeRNAi:60625 NextBio:65461 IPI:IPI00513682
RefSeq:NP_001177738.1 ProteinModelPortal:F5GXM6 SMR:F5GXM6
Ensembl:ENST00000373323 UCSC:uc010zwc.2 ArrayExpress:F5GXM6
Bgee:F5GXM6 Uniprot:F5GXM6
Length = 672
Score = 1224 (435.9 bits), Expect = 1.5e-124, P = 1.5e-124
Identities = 256/602 (42%), Positives = 365/602 (60%)
Query: 620 QYLLEDGYTTNG-IVGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGP-STL 677
+YL E G+T G +VG TQPRRVAA++VA RV+EE LG +VGY IRF+D T +T
Sbjct: 58 KYLAEAGWTAEGRVVGVTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATR 117
Query: 678 IKYMTDGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTS 737
IK++TDG+L+RE + D L KY VI++DEAHER+L TD+ G+LKK+ +R D +LIV S
Sbjct: 118 IKFLTDGMLVREMMVDPLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVAS 177
Query: 738 ATLNAQKFSDFFG----SVP------IFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTI 787
ATL+A KF DFF S P I + GRTFPV+ Y ++P DY+++ V+ + I
Sbjct: 178 ATLDADKFRDFFNQNETSDPARDTCVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVVKI 237
Query: 788 HITSPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAK 847
H T GD+L F+TGQ+E+E L E+ L + + L +LP+Y+ LP+ Q K
Sbjct: 238 HQTEGDGDVLAFLTGQEEVETVVSMLIEQARALARTGMKR--HLRVLPMYAGLPSFEQMK 295
Query: 848 IFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXX 907
+FE+ RK IVATN+AETS+T+ GI YVID G+ K++ YNP+ ++ L V PVS
Sbjct: 296 VFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQAS 355
Query: 908 XXXXXXXXXXXXXXXCYRLYTESAYLNEMLP-SPVPEIQRTNLGNVVXXXXXXXXXXXXX 966
CYRLYTE A+ + LP S VPE+QR+NL V+
Sbjct: 356 ANQRAGRGGRSRSGKCYRLYTEEAF--DKLPQSTVPEMQRSNLAPVILQLKALGIDNVLR 413
Query: 967 FDFMDPPPQENILNSMYQLWVLGALNNVGALTD-LGWKMVEFPLDPPLAKMLLMGEQLGC 1025
F FM PPP ++++ ++ L+ LG L+ LT+ LG ++ EFPL+P AKMLL GC
Sbjct: 414 FHFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGC 473
Query: 1026 LDEVLTIVSMLSVPSVFFRPKDRAEESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGDW 1085
E+L+I +M+ + ++F P ++ + KF V+E DHLT+L +Y+ + +H W
Sbjct: 474 SQEILSIAAMMQIQNIFVVPPNQKSHAIRVHRKFAVEEGDHLTMLNIYEAFIKHNKDSKW 533
Query: 1086 CEEHYLHVKSLRKAREVRSQLLDILKTLKIPLTSSGHDFDVVRKAICSAYFHNAARLKGV 1145
C+EH+L+ K L +A VR QL +L ++P SS D D+V + I S +F NAAR
Sbjct: 534 CQEHFLNYKGLVRAATVREQLKKLLVKFQVPRKSSEGDPDLVLRCIVSGFFANAARFHST 593
Query: 1146 GEYINCRNGMPCHLHPSSAIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPM 1205
G Y R+ H+HP+S +Y P +V+Y+E+I T+K YM+ TA+E WL EL P
Sbjct: 594 GAYRTIRDDHELHIHPASVLYA-EKPPRWVIYNEVIQTSKYYMRDVTAIESAWLLELAPH 652
Query: 1206 FF 1207
F+
Sbjct: 653 FY 654
>UNIPROTKB|E1BYA5 [details] [associations]
symbol:DHX33 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000182 "rDNA binding"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0045943 "positive regulation of
transcription from RNA polymerase I promoter" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005654 GO:GO:0005730 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AADN02025994
IPI:IPI00823199 Ensembl:ENSGALT00000002492 ArrayExpress:E1BYA5
Uniprot:E1BYA5
Length = 660
Score = 1221 (434.9 bits), Expect = 3.0e-124, P = 3.0e-124
Identities = 262/644 (40%), Positives = 378/644 (58%)
Query: 579 AEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNGIVGCTQP 638
A QR+ LPIF R LL +R + GETGSGKTTQ+ QYL E G GI+ TQP
Sbjct: 18 ASQRRELPIFQARGPLLSQLRGLECAVLIGETGSGKTTQIPQYLYEAGIGRQGIIAVTQP 77
Query: 639 RRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDSDLDK 698
RRVAA+S+A RVS+E TELG VGY +RF+D+T T IK++TDG+LLRE + D L K
Sbjct: 78 RRVAAISLATRVSDEKRTELGKLVGYTVRFDDLTSDETRIKFLTDGMLLREAIGDPILRK 137
Query: 699 YRVIVMDEAHERSLSTDVLFGILKKVVARRRDF-----KLIVTSATLNAQKFSDFFGSVP 753
Y V+++DEAHER++ TDVLFG++K +R++ K+IV SAT++ +FS +F P
Sbjct: 138 YSVVILDEAHERTIHTDVLFGVVKAAQKKRKELGKLPLKVIVMSATMDVDQFSQYFNGAP 197
Query: 754 IFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPG-DILIFMTGQDEIEAACFA 812
+ ++ GR P+ Y+K P DY++AA+ IH +P DIL+F+TGQ+EIEA
Sbjct: 198 VLYLEGRQHPIQVFYTKQPQSDYLQAALVSVFQIHQEAPSSQDILVFLTGQEEIEAMTKT 257
Query: 813 LKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTV 872
++ + L P++ ++P+Y+ LP Q ++F+ A +G RK I++TNIAETS+T+
Sbjct: 258 CRDIAKHLPDGC----PQMTVMPLYASLPYSQQLRVFQAAPKGCRKVILSTNIAETSITI 313
Query: 873 DGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAY 932
GI YV+DTG K K YNP++G++ L V VS CYRLYTE +
Sbjct: 314 SGIKYVVDTGMVKAKKYNPEIGLEVLAVQRVSKAQAWQRTGRAGREDSGICYRLYTEDEF 373
Query: 933 LNEMLPSPVPEIQ---RTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLG 989
+ VPEIQ R NL +V+ FDFM P + I ++ QL +LG
Sbjct: 374 -EKFDKMTVPEIQSLCRCNLASVLLQLLALRIPNILTFDFMSKPSPDAIQAAIEQLDLLG 432
Query: 990 ALNNVG---ALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPK 1046
A+ LT LG KM FPL+P +K +L+ + C +E+LTIVS+LSV SV + P
Sbjct: 433 AVEQKEDQLVLTPLGRKMAAFPLEPKFSKTILLSPKFHCTEEILTIVSLLSVDSVLYNPP 492
Query: 1047 DRAEESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQL 1106
R +E + R+KF E DHLTLL VY+ +K +WC+E++++ +++ +VR+QL
Sbjct: 493 ARRDEVQSVRKKFISSEGDHLTLLNVYRAFKNVSGNKEWCKENFVNGRNMMLVSDVRAQL 552
Query: 1107 LDILKTLKIPLTSSGHDFDVVRKAICSAYFHNAARLKGVGEYINCRNGMPCHLHPSSAIY 1166
DI L +P+ SS D +R+ + + F NAA L+ G Y + +HPSS ++
Sbjct: 553 RDICVKLSMPMESSRSDTANIRRCLAHSLFMNAAELQPDGTYSTVNSHQLVAIHPSSVLF 612
Query: 1167 GLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFFSVK 1210
P VVY+ L+ T K YM+ V+ +WL + P +F K
Sbjct: 613 HC--KPSCVVYNGLLHTNKCYMRDLCVVDAEWLYDAAPDYFRRK 654
>UNIPROTKB|F1PRA1 [details] [associations]
symbol:DHX33 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045943 "positive regulation of transcription
from RNA polymerase I promoter" evidence=IEA] [GO:0033613
"activating transcription factor binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0000182 "rDNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005654 GO:GO:0005730
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AAEX03003580
Ensembl:ENSCAFT00000024626 Uniprot:F1PRA1
Length = 616
Score = 1219 (434.2 bits), Expect = 4.9e-124, P = 4.9e-124
Identities = 259/612 (42%), Positives = 366/612 (59%)
Query: 608 GETGSGKTTQLTQYLLEDGYTTNGIVGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIR 667
GETGSGKTTQL QYL E G G++ TQPRRVAA+S+A RVS+E TELG VGY +R
Sbjct: 6 GETGSGKTTQLPQYLYEGGIGRQGVIAVTQPRRVAAISLATRVSDEKRTELGKLVGYTVR 65
Query: 668 FEDVTGPSTLIKYMTDGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVAR 727
F+DV+ T IK++TDG+LLRE + DS L KY I++DEAHER++ TDVLFG++K R
Sbjct: 66 FDDVSSEDTRIKFLTDGMLLREAISDSLLRKYSCIILDEAHERTVHTDVLFGVVKAAQRR 125
Query: 728 RRDF-----KLIVTSATLNAQKFSDFFGSVPIFHIPGRTFPVNTLYSKTPCEDYVEAAVK 782
R++ K+IV SAT++ FS +F + ++ GR P+ Y+K P +DY+ AA+
Sbjct: 126 RKELRKLPLKVIVMSATMDVDLFSQYFNGASVLYLEGRQHPIQVFYTKQPQQDYLHAALV 185
Query: 783 QAMTIHITSPPG-DILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLP 841
IH +P DIL+F+TGQ+EIEA ++ + L P +L+LP+Y+ LP
Sbjct: 186 SVFQIHQEAPSSQDILVFLTGQEEIEAVSKTCRDIAKHLPDGC----PSMLVLPLYASLP 241
Query: 842 ADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVF 901
Q ++F+ A +G RK I+ATNIAETS+T+ GI YV+DTG K K YNP G++ L V
Sbjct: 242 YAQQLRVFQGAPKGCRKVIIATNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQ 301
Query: 902 PVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXX 961
VS CYRLYTE+ + + VPEIQR NL +V+
Sbjct: 302 RVSKTQAWQRAGRAGREDSGICYRLYTENEF-EKFEKMTVPEIQRCNLASVLLQLLAMKV 360
Query: 962 XXXXXFDFMDPPPQENILNSMYQLWVLGAL---NNVGALTDLGWKMVEFPLDPPLAKMLL 1018
FDFM P +++ ++ QL +LGAL +N LT +G KM FPL+P AK +L
Sbjct: 361 PNVLTFDFMSKPSPDHMQAAVAQLDLLGALERKDNQLTLTPIGRKMAAFPLEPKFAKTIL 420
Query: 1019 MGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAAREKFFVQESDHLTLLYVYQQWKE 1078
+ + C +E+LTIVS+LSV SV + P R +E A R+KF E DH+TLL +Y+ +K
Sbjct: 421 LSPKFHCTEEILTIVSLLSVDSVLYNPPSRRDEVQAMRKKFLSSEGDHITLLNIYRTFKS 480
Query: 1079 HQYRGDWCEEHYLHVKSLRKAREVRSQLLDILKTLKIPLTSSGHDFDVVRKAICSAYFHN 1138
DWC E++++ +++ A EVR+QL DI + +P+ S D + +R+ + + F +
Sbjct: 481 LGGDKDWCRENFVNSRNMMLAAEVRAQLRDICLKMSMPMVSCRGDVESIRRCLAHSLFMS 540
Query: 1139 AARLKGVGEYINCRNGMPCHLHPSSAIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQW 1198
AA L+ G Y + P +HPSSA++ P VVY EL+ T+K YM+ V +W
Sbjct: 541 AAELQPDGTYTTTDSRQPVAIHPSSALFHC--RPACVVYTELLHTSKCYMRDLCVVAAEW 598
Query: 1199 LSELGPMFFSVK 1210
L E P +F K
Sbjct: 599 LYEAAPDYFRRK 610
>POMBASE|SPAC2G11.11c [details] [associations]
symbol:prh1 "ATP-dependent RNA helicase Prh1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005730 "nucleolus" evidence=ISO;IDA] [GO:0042254 "ribosome
biogenesis" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
PomBase:SPAC2G11.11c GO:GO:0005524 EMBL:CU329670 GO:GO:0005730
GenomeReviews:CU329670_GR GO:GO:0006397 GO:GO:0042254 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
KO:K14781 OrthoDB:EOG4F7RTB EMBL:D13249 PIR:S35546 PIR:S62466
RefSeq:NP_593091.1 ProteinModelPortal:Q03319
EnsemblFungi:SPAC2G11.11c.1 GeneID:2541750 KEGG:spo:SPAC2G11.11c
OMA:MANDTTI NextBio:20802841 Uniprot:Q03319
Length = 719
Score = 1216 (433.1 bits), Expect = 1.0e-123, P = 1.0e-123
Identities = 250/640 (39%), Positives = 384/640 (60%)
Query: 573 AKSKTLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNGI 632
+K K + EQR+ LPI+ D L Q I++N+ GETGSGK+TQ+ Q+L E Y G
Sbjct: 84 SKRKDILEQRKNLPIWEAHDTLCQQIQDNRVIVVVGETGSGKSTQIPQFLNECPYAQEGC 143
Query: 633 VGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLK 692
V TQPRRVAA+++AKRV+ E LG++VGY+IRF+D T T IKY+TDG+LLRE +
Sbjct: 144 VAITQPRRVAAVNLAKRVAAEQGCRLGEQVGYSIRFDDTTSKKTRIKYLTDGMLLRELIN 203
Query: 693 DSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSV 752
D L +Y +++DEAHER+L TD+L G +KK++ +R ++I+ SATLNA++FS+FF
Sbjct: 204 DPILSQYHTLILDEAHERTLMTDMLLGFVKKIIKKRPALRVIIMSATLNAERFSEFFDGA 263
Query: 753 PIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFA 812
I +I GR +PV Y+ TP DY++A ++ +H PPGDIL+F+TGQDEIEA
Sbjct: 264 EICYISGRQYPVQIHYTYTPEPDYLDACLRTIFQLHTKLPPGDILVFLTGQDEIEALEAL 323
Query: 813 LKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTV 872
+K +QL S+ +P++ P+++ LP + Q ++F A RK +++TNIAETS+T+
Sbjct: 324 IKSYSKQLPSN----LPQIQACPLFASLPQEQQLQVFLPALANHRKVVLSTNIAETSVTI 379
Query: 873 DGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAY 932
GI YVIDTG K+K +N K+G+++L V P+S CYR+YTE+ +
Sbjct: 380 SGIRYVIDTGLAKIKQFNSKLGLESLTVQPISQSAAMQRSGRAGREAAGQCYRIYTEADF 439
Query: 933 LNEMLPSP-VPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGAL 991
+ LP +PEI+R +L V F +MDPP +E +L ++ L+ +GAL
Sbjct: 440 --DKLPKETIPEIKRIDLSQAVLTLKARGQNDVINFHYMDPPSKEGLLRALEHLYSIGAL 497
Query: 992 NNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEE 1051
++ G + DLG++M PL P LA+ +L + CL EV+ +VS LS S+F P+++ +E
Sbjct: 498 DDNGHINDLGYQMSLIPLLPSLARAVLAAREHNCLSEVIDVVSCLSTDSMFLFPQEKRDE 557
Query: 1052 SDAAREKFFVQESDHLTLLYVYQQWKE--HQYRGDWCEEHYLHVKSLRKAREVRSQLLDI 1109
+ AR KF E D LT L +Q+ E H R WC +++++ ++L+ ++R QL +
Sbjct: 558 AIEARLKFLHSEGDLLTCLNALRQYLESSHDSRKQWCSQNFINRRALKTILDIRKQLREH 617
Query: 1110 LKTLKIPLTSSGH-DFDVVRKAICSAYFHNAARLKGVGEYINCRNGMPCHLHPSSAIYGL 1168
L SS + + + + S Y N A L G Y +HPSS+++G
Sbjct: 618 CLKDGWELNSSPEVNSENLLLSFLSGYITNTALLHPDGSYRTIIGNQTISIHPSSSLFGK 677
Query: 1169 GYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFFS 1208
E ++YHEL+ TTK Y++ +++ WL+ + P + +
Sbjct: 678 KV--EAIMYHELVFTTKSYVRGVSSIRSNWLNAVAPHYLA 715
>FB|FBgn0031631 [details] [associations]
symbol:CG3225 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:AE014134 GO:GO:0006200
GO:GO:0003676 GO:GO:0004386 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GO:GO:0016779 GeneTree:ENSGT00700000104241 KO:K13117 OMA:NIFVVPP
EMBL:AY069418 RefSeq:NP_608860.1 UniGene:Dm.300 SMR:Q9VR29
DIP:DIP-18193N IntAct:Q9VR29 MINT:MINT-288733
EnsemblMetazoa:FBtr0077416 GeneID:33680 KEGG:dme:Dmel_CG3225
UCSC:CG3225-RA FlyBase:FBgn0031631 InParanoid:Q9VR29
OrthoDB:EOG4H189P GenomeRNAi:33680 NextBio:784751 Uniprot:Q9VR29
Length = 678
Score = 1182 (421.1 bits), Expect = 7.4e-122, Sum P(2) = 7.4e-122
Identities = 252/640 (39%), Positives = 379/640 (59%)
Query: 578 LAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNGIVGCTQ 637
L EQR+ LPI RD++L + ++Q GETGSGK+TQ+ QYL E G+ T G++G T+
Sbjct: 40 LMEQRERLPIRQYRDQILYCLEKHQVVILVGETGSGKSTQVPQYLYEWGWHTKGLIGITE 99
Query: 638 PRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDSDLD 697
PRRV+ +++A RV++E +GD VGY +RF + T IK+MT+G+LLRE L D L
Sbjct: 100 PRRVSTVTLANRVAQERGELVGDTVGYVVRFLESMSSCTKIKFMTEGILLREVLADPLLT 159
Query: 698 KYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFF-----GSV 752
+Y VI++DEAHER++ TD++ G+LKK++ +R KLI++SAT++A FS+FF G V
Sbjct: 160 QYGVIIVDEAHERNMLTDMILGLLKKILRKRSSLKLIISSATIDASFFSEFFSWPGSGEV 219
Query: 753 PI-FHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACF 811
+ I GR PV+ Y PC DYV+ V+ +H PPGDIL F+TGQ+E+ A
Sbjct: 220 SVKLSIEGRMHPVSNFYLNEPCADYVKETVETVWKLHQKEPPGDILAFLTGQEEVLEALD 279
Query: 812 ALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLT 871
L+E I+S+ +E L +LP+Y + + Q +F +GTRK ++ATNIAETS+T
Sbjct: 280 LLRE----YIASSEQE--NLKVLPMYGSMSSTDQLSVFFTPPKGTRKVVLATNIAETSIT 333
Query: 872 VDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESA 931
+ GI YVID GY K+K YNPK D+L + PVS YRLYT+S
Sbjct: 334 IPGIVYVIDCGYVKVKWYNPKTCSDSLVIVPVSKASAIQRAGRAGRMRPGKVYRLYTKSD 393
Query: 932 YLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGAL 991
Y + P PE++R+ L + FDF PPP +N+L+++ L+ L A+
Sbjct: 394 Y-EALAPRQPPEMRRSELSGAILQLKALGIGNILRFDFPSPPPAQNLLSALESLFALDAI 452
Query: 992 NNVGALTD-LGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDR-A 1049
+ G LT +G+ + E P L+KML + Q+GC +E++TI+++L V S+F RP A
Sbjct: 453 DEQGNLTKPVGYLLAELPFSAMLSKMLYVSGQMGCSEEIITIIALLQVQSIFSRPASAVA 512
Query: 1050 EESDA-AREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQLLD 1108
++S A KF V E D +T+L Y + E ++C +++L ++L++A +R QL+
Sbjct: 513 QQSGRIAHRKFEVAEGDFITMLNAYTGFVEEGMTKEFCGQYFLIYRNLKRAHSLREQLIT 572
Query: 1109 IL-KTLKIPLTSSGHDFDVVRKAICSAYFHNAARLKGVGEYINCRNGMPCHLHPSSAIYG 1167
+ K IP+ S D + + K I + +F A L G Y +G +HP+S +Y
Sbjct: 573 VARKKYGIPIFSCKGDVEKLCKCITAGFFTQVAYLHHSGVYRQISSGTELAIHPNSTLYT 632
Query: 1168 LGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFF 1207
L +YVVY EL+ TTK +M T ++ +WL+EL P ++
Sbjct: 633 LPQA-QYVVYGELLQTTKLFMNYVTVIKREWLTELAPHYY 671
Score = 37 (18.1 bits), Expect = 7.4e-122, Sum P(2) = 7.4e-122
Identities = 6/12 (50%), Positives = 11/12 (91%)
Query: 451 EEHKVILLVHDT 462
E+H+V++LV +T
Sbjct: 61 EKHQVVILVGET 72
>SGD|S000005294 [details] [associations]
symbol:PRP2 "RNA-dependent ATPase in the DEAH-box family"
species:4932 "Saccharomyces cerevisiae" [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008186 "RNA-dependent ATPase
activity" evidence=IDA] [GO:0071006 "U2-type catalytic step 1
spliceosome" evidence=IMP;IDA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0000349 "generation of catalytic spliceosome for
first transesterification step" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 SGD:S000005294
GO:GO:0005524 GO:GO:0005634 EMBL:BK006947 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:X77395
GO:GO:0000349 eggNOG:COG1643 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
OrthoDB:EOG4SBJ63 GO:GO:0008186 EMBL:X55936 EMBL:X55999 EMBL:Z71626
PIR:S12334 RefSeq:NP_014408.1 ProteinModelPortal:P20095 SMR:P20095
DIP:DIP-3961N IntAct:P20095 MINT:MINT-496813 STRING:P20095
PaxDb:P20095 EnsemblFungi:YNR011C GeneID:855745 KEGG:sce:YNR011C
CYGD:YNR011c KO:K12814 OMA:DDKIHIN NextBio:980148
Genevestigator:P20095 GermOnline:YNR011C Uniprot:P20095
Length = 876
Score = 1191 (424.3 bits), Expect = 4.6e-121, P = 4.6e-121
Identities = 263/621 (42%), Positives = 364/621 (58%)
Query: 507 KQTQNKSRQRFWE---LAGSQMGN--------ILGVKKTAEQVDADTAVVGEQGEIDFRE 555
K+ +RQR WE L + G + G K D D + E D
Sbjct: 133 KEIDKINRQRMWEEQQLRNAMAGQSDHPDDITLEGSDKYDYVFDTDAMIDYTNEEDDLLP 192
Query: 556 DAKFSQHMKKGEAVSDFAKS-KTLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGK 614
+ K + +A+ K T+ E R+ LP+ +DELLQ I++NQ GETGSGK
Sbjct: 193 EEKLQYEARLAQALETEEKRILTIQEARKLLPVHQYKDELLQEIKKNQVLIIMGETGSGK 252
Query: 615 TTQLTQYLLEDGYTTNGI--VGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVT 672
TTQL QYL+EDG+T G + TQPRRVAA SVA RV++EM+ LG +VGY IRFED T
Sbjct: 253 TTQLPQYLVEDGFTDQGKLQIAITQPRRVAATSVAARVADEMNVVLGKEVGYQIRFEDKT 312
Query: 673 GPS-TLIKYMTDGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDF 731
P+ T++KYMTDG+LLRE L DS L KY I++DEAHER+L+TD+L G+LK ++ +R
Sbjct: 313 TPNKTVLKYMTDGMLLREFLTDSKLSKYSCIMIDEAHERTLATDILIGLLKDILPQRPTL 372
Query: 732 KLIVTSATLNAQKFSDFFGSVPIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHIT- 790
KL+++SAT+NA+KFS+FF + PIF++PGR +PV+ Y+ P +Y+ AA+ IH T
Sbjct: 373 KLLISSATMNAKKFSEFFDNCPIFNVPGRRYPVDIHYTLQPEANYIHAAITTIFQIHTTQ 432
Query: 791 SPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFE 850
S PGDIL+F+TGQ+EIE K ++E+++S +++I PIY+ LP + Q KIF+
Sbjct: 433 SLPGDILVFLTGQEEIERT----KTKLEEIMSKLGSRTKQMIITPIYANLPQEQQLKIFQ 488
Query: 851 KAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXX 910
E RK ++ATNIAETSLT+DGI YVID G+ K Y P GM L P S
Sbjct: 489 PTPENCRKVVLATNIAETSLTIDGIRYVIDPGFVKENSYVPSTGMTQLLTVPCSRASVDQ 548
Query: 911 XXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFM 970
C+R++T+ +YL+E+ P PEI RTNL N V F M
Sbjct: 549 RAGRAGRVGPGKCFRIFTKWSYLHELELMPKPEITRTNLSNTVLLLLSLGVTDLIKFPLM 608
Query: 971 DPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMG---EQL-GCL 1026
D P + S+ L++LGALN+ G +T LG M EFP +P AK+L EQ G L
Sbjct: 609 DKPSIPTLRKSLENLYILGALNSKGTITRLGKMMCEFPCEPEFAKVLYTAATHEQCQGVL 668
Query: 1027 DEVLTIVSML-SVPSVFFRPKDRAEESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGDW 1085
+E LTIVSML PS+F ++ DAA ESDH+ L ++ QW+ ++ W
Sbjct: 669 EECLTIVSMLHETPSLFI-----GQKRDAAASVLSEVESDHILYLEIFNQWRNSKFSRSW 723
Query: 1086 CEEHYLHVKSLRKAREVRSQL 1106
C++H + K++ + R +R+QL
Sbjct: 724 CQDHKIQFKTMLRVRNIRNQL 744
>WB|WBGene00022056 [details] [associations]
symbol:Y67D2.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GeneTree:ENSGT00700000104241 EMBL:FO081642 RefSeq:NP_497420.1
ProteinModelPortal:Q9BKQ8 SMR:Q9BKQ8 MINT:MINT-1068531
STRING:Q9BKQ8 PaxDb:Q9BKQ8 EnsemblMetazoa:Y67D2.6 GeneID:175308
KEGG:cel:CELE_Y67D2.6 UCSC:Y67D2.6 CTD:175308 WormBase:Y67D2.6
InParanoid:Q9BKQ8 KO:K13117 OMA:NIFVVPP NextBio:887600
Uniprot:Q9BKQ8
Length = 732
Score = 1156 (412.0 bits), Expect = 2.3e-117, P = 2.3e-117
Identities = 248/674 (36%), Positives = 386/674 (57%)
Query: 575 SKTLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNGI-V 633
S + +QR LPIF R +L + + GETG GK+TQ+ Q+LLE G+ +G +
Sbjct: 67 SLNIQQQRIRLPIFKNRGHILYMCERYRTIIIVGETGCGKSTQVPQFLLEAGWAADGRQI 126
Query: 634 GCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKD 693
TQPRRVA +++A RV+EE D LG VGY +RF+DV+ T +K+MTDG+LLRE L D
Sbjct: 127 VITQPRRVAVVTLATRVAEEKDCILGHDVGYTVRFDDVSDKDTKVKFMTDGLLLREILAD 186
Query: 694 SDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFF---- 749
L KY +I++DEAHERS +TD+L G+L+K++ R D ++IV+SATL+A+ F DFF
Sbjct: 187 PLLSKYSIIMIDEAHERSCNTDILLGLLRKIIQIRNDLRIIVSSATLDAELFKDFFEMNE 246
Query: 750 -GS-----VPIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQ 803
G+ I + GRT PV ++KT DY ++AV + IH PGDIL+F+TGQ
Sbjct: 247 TGNSDKDTAGIISVEGRTHPVAVHHTKTSVPDYCQSAVDTVINIHKHENPGDILVFLTGQ 306
Query: 804 DEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVAT 863
DE+E C L+E ++ + L ++P Y LPA Q K F+ GTRK +VAT
Sbjct: 307 DEVEDVCEKLRE-----LAGNLKNCDRLWVVPCYGALPAREQMKAFDSTPHGTRKVVVAT 361
Query: 864 NIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXC 923
NIAE S+T+ GI YVIDTGY K++ + G++ L VS C
Sbjct: 362 NIAEASITIPGICYVIDTGYVKLRAQHAANGVETLMRVTVSKASAEQRAGRAGRIRPGKC 421
Query: 924 YRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMY 983
YRLY ES + VPEIQR + + + F ++ PPP ++N +
Sbjct: 422 YRLYPESEF-ERFAEGTVPEIQRCQMASTILQLKALGVQNVHRFHYLSPPPSWAMINGLE 480
Query: 984 QLWVLGALNNVGALTD-LGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVF 1042
L+ LGA++ LT LG +M EFPL P +K LL + GC E++TIV+M+ + VF
Sbjct: 481 LLYALGAIDETSQLTSPLGLQMAEFPLPPMHSKCLLKSAEFGCSTEMVTIVAMMQIQDVF 540
Query: 1043 FRPKDRAEESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREV 1102
P + ++D R+KF V+E DH+T+L V+ ++ E+ WC +H+++ + L +A V
Sbjct: 541 ITPYRQRHQADVIRKKFAVEEGDHMTMLNVFTKFVENGRSKKWCSDHFVNYRGLMRADNV 600
Query: 1103 RSQLLDILKTLKIPLTSS-G--HDFDVVRKAICSAYFHNAARLKGVGEYINCRNGMPCHL 1159
RSQL+ +LK +I SS G + + +R+ + + +F AA+ G+Y+ + P ++
Sbjct: 601 RSQLVRLLKRFEIEKVSSRGLINCSENIRQCLVTGFFSQAAQYHYTGKYMTVKESFPFNM 660
Query: 1160 HPSSAIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFFSVKDSDTSMLEH 1219
+ S+I P++V++ E++ ++ ++ T +EP+WL EL P ++ ++ + E
Sbjct: 661 YKGSSIMFKKDYPKWVIFTEVM---QDSIRDVTVIEPEWLYELAPHYYEF-GTEGELAEK 716
Query: 1220 KKKQKESKTAMEEE 1233
+ + + +A ++
Sbjct: 717 RMRGPAATSAAADD 730
>DICTYBASE|DDB_G0269306 [details] [associations]
symbol:dhx35 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0269306 GO:GO:0005524
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K13117 OMA:NIFVVPP
RefSeq:XP_645858.1 ProteinModelPortal:Q55EC3
EnsemblProtists:DDB0233419 GeneID:8616802 KEGG:ddi:DDB_G0269306
InParanoid:Q55EC3 Uniprot:Q55EC3
Length = 716
Score = 779 (279.3 bits), Expect = 4.3e-117, Sum P(3) = 4.3e-117
Identities = 169/477 (35%), Positives = 269/477 (56%)
Query: 754 IFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFAL 813
I I GRT+PV+ Y + +Y++ ++ + IH T PPGDIL+F+TGQ+EIE L
Sbjct: 247 ILSIEGRTYPVDIHYLEESTSNYIQTTIQTIIDIHTTQPPGDILVFLTGQEEIEKLIQTL 306
Query: 814 KERMEQLIS-----STTREVP--ELLILPIYSQLPADLQAKIFEKAKEGT--RKCIVATN 864
++ E L ++ P + +LP+YS L + Q K+FE + RK I++TN
Sbjct: 307 DDKFEILRQYHQQHHHQQQQPFMKYSLLPMYSGLSINKQIKVFESVGDSKKIRKIIISTN 366
Query: 865 IAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCY 924
IAETS+T+DG+ YV+D G+ K+K Y+ + G+++L + P S CY
Sbjct: 367 IAETSITIDGVVYVVDCGFVKIKSYDSESGLESLVIVPTSKSSANQRAGRAGRSRAGKCY 426
Query: 925 RLYTESAYLNEMLPSP-VPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMY 983
RLYTE Y ++LP +PEIQR+NL N + FDF+ PP +++ +
Sbjct: 427 RLYTELTY-EKLLPDQTIPEIQRSNLTNTILQLKALGIDNILNFDFISQPPSSSLIRGLE 485
Query: 984 QLWVLGALNNVGALTD-LGWKMVEFPLDPPLAKMLLMGEQLG--CLDEVLTIVSMLSVPS 1040
L+ LGAL++ G LT+ G M EFP DP +KM++ G C DE +TI +ML++
Sbjct: 486 VLYGLGALDDNGKLTNPTGMIMAEFPTDPTFSKMIIQSSSNGFNCSDECITITAMLNIQG 545
Query: 1041 VFFRPKDRAEESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAR 1100
+F ++ +R+ V+E DHLTLL ++ + +Q WC +H ++ K++++
Sbjct: 546 LF------TNQNHKSRKHLLVKEGDHLTLLNIFNSFISNQSSPQWCNQHQINYKAMQRVL 599
Query: 1101 EVRSQLLDILKTLKIPLTS---SGHDFD----VVRKAICSAYFHNAARLKGVGEYINCRN 1153
+VR QLL K I + S S ++ + ++RKAI S +F NAA+L+ G Y R
Sbjct: 600 QVRKQLLAYAKKYSINVISCFDSNNNREQCSNLIRKAIVSGFFTNAAQLQPDGSYQTIRE 659
Query: 1154 GMPCHLHPSSAIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFFSVK 1210
LHP+S + L +P++V+++E+ +TTKEYM+ T++EP WL E+ P ++ K
Sbjct: 660 KHKLWLHPTSVLC-LSNSPQWVIFNEVTITTKEYMKDVTSIEPNWLFEIAPHYYKFK 715
Score = 390 (142.3 bits), Expect = 4.3e-117, Sum P(3) = 4.3e-117
Identities = 86/186 (46%), Positives = 123/186 (66%)
Query: 577 TLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTN-GIVGC 635
T+ +QR LPI+ R +L ++ + G TG GK+TQ+ QYL E G++ + C
Sbjct: 47 TIQQQRISLPIYQNRKHILYLLEKYSTLVIIGNTGCGKSTQIPQYLFESGWSDGFRTILC 106
Query: 636 TQPRRVAAMSVAKRVSEEM-DTELGDKVGYAIRFED-VTGPSTLIKYMTDGVLLRETLKD 693
TQPRRVAA+S+A+RV++EM + +G VGY++RF++ ++ T IKY+TDG+L+RE + D
Sbjct: 107 TQPRRVAAISLAERVAQEMGEQHVGKTVGYSVRFDEKISDIETRIKYVTDGMLIREMMLD 166
Query: 694 SDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRD----------FKLIVTSATLNAQ 743
L KY VI++DEAHERSL TD+L G+LKKV +R KLI++SATLNA
Sbjct: 167 PLLLKYSVIMIDEAHERSLQTDLLMGLLKKVQKKRNSTNNNNNNDNSLKLIISSATLNAN 226
Query: 744 KFSDFF 749
F +FF
Sbjct: 227 DFFNFF 232
Score = 37 (18.1 bits), Expect = 4.3e-117, Sum P(3) = 4.3e-117
Identities = 12/61 (19%), Positives = 26/61 (42%)
Query: 356 EMEYNSDRAWYDREEGTTMFDTDSSSFILGDDASYQKKEVELAKRLVRKDGSRMSLAQSK 415
++ NS + ++FD DSS D+ Y + K +++ + + Q++
Sbjct: 6 QINNNSSNNNNNNNNNNSLFDKDSSLSFGNDNFIYNSNQ----KLTIQQQRISLPIYQNR 61
Query: 416 K 416
K
Sbjct: 62 K 62
>FB|FBgn0032194 [details] [associations]
symbol:CG4901 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0000390 "spliceosomal complex disassembly" evidence=ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0004386
"helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014134 GO:GO:0022008 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AY113491
RefSeq:NP_609356.2 UniGene:Dm.10854 SMR:Q9VL25 MINT:MINT-898830
STRING:Q9VL25 EnsemblMetazoa:FBtr0079947 GeneID:34357
KEGG:dme:Dmel_CG4901 UCSC:CG4901-RA FlyBase:FBgn0032194
InParanoid:Q9VL25 OrthoDB:EOG4MW6N5 GenomeRNAi:34357 NextBio:788096
Uniprot:Q9VL25
Length = 694
Score = 1144 (407.8 bits), Expect = 4.4e-116, P = 4.4e-116
Identities = 243/640 (37%), Positives = 383/640 (59%)
Query: 573 AKSKTLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNGI 632
+K ++ +Q++ LP+F+ R +L+ + N ETGSGKTTQ+ Q+LL GY NG+
Sbjct: 56 SKRTSIEQQQKSLPVFNCRHRILKELEANDTVLIMSETGSGKTTQIPQFLLLAGYAKNGM 115
Query: 633 VGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLK 692
+G TQPRRVAA++VA+RV++E++ +GD VGY +RFEDVT +T I+++TDGVLLRE++K
Sbjct: 116 IGITQPRRVAAITVARRVAQELNGTIGDTVGYTVRFEDVTSRATKIRFLTDGVLLRESIK 175
Query: 693 DSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRR-----DFKLIVTSATLNAQKFSD 747
D L KY VI++DEAHER+++ D+LFGI+K RR + K++VTSAT++ F +
Sbjct: 176 DRLLLKYSVIILDEAHERTVNADLLFGIVKDAQKERRKQKLANLKVVVTSATMDIDHFGN 235
Query: 748 FFGSVPIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPG-DILIFMTGQDEI 806
+F ++ + GRT+PV +++K EDY+ + IH T+P D+LIF+TGQ+EI
Sbjct: 236 YFNCKGMY-LEGRTYPVRVMHTKEEHEDYIHTVLVTLFHIHRTTPKNHDVLIFLTGQEEI 294
Query: 807 EAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIA 866
E+ L +++ QL T +L + +Y+QL Q + F RK I+ATNIA
Sbjct: 295 ES----LAQQIRQLAKIDTTGTTDLRVFTLYAQLSQGKQLECFVPTPANVRKVILATNIA 350
Query: 867 ETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRL 926
ETS+T+ GI VID G+ K K +N G+D L+ +S CYR
Sbjct: 351 ETSITIPGIRCVIDCGFVKEKSFNTVDGLDVLKSVRISKAQAWQRAGRAGRDADGTCYRA 410
Query: 927 YTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLW 986
YT+ A ++ + PEI RTN ++V FDF+DPP ++ + ++ L
Sbjct: 411 YTK-AEMDSFADATQPEILRTNPTSMVLQLLALDIDCNN-FDFLDPPLEDGLRSAYKSLD 468
Query: 987 VLGALN--NVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFR 1044
LGA+ + +T LG +MV++PLDP +K+LL GC++E+L++VS+LS VF
Sbjct: 469 ALGAIKTGDDSYITPLGRQMVQYPLDPKYSKLLLTASSFGCMEEILSLVSVLSSDHVFVS 528
Query: 1045 PKDRAEESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRS 1104
++ E + A KF + DHLTLL V+ + + + WC ++YL+++SL AR VR
Sbjct: 529 NSEKNEMAALAHAKFQSKHGDHLTLLNVFNGFLKSEKPKMWCHDNYLNLRSLTYARNVRR 588
Query: 1105 QLLDILKTLKIPLTSSGHDFDVVRKAICSAYFHNAARLKGVGEYINCRNGMPCHLHPSSA 1164
QL +I + L + L SS D ++++K I + +F N A L+ G YI + +HPSS
Sbjct: 589 QLREISEHLHLALNSSD-DIEMLKKCILNGFFENIAVLQRDGFYITASGNIRSKIHPSSV 647
Query: 1165 IYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGP 1204
++G Y P Y+++ E++ T + +++ T + +W+ E+ P
Sbjct: 648 LHGK-YKPSYILFTEIVQTEQTFLRQVTEISIEWIKEVVP 686
>TAIR|locus:2010549 [details] [associations]
symbol:AT1G27900 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007126 "meiosis" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0010332 "response to gamma
radiation" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0032204 "regulation of telomere
maintenance" evidence=RCA] [GO:0033044 "regulation of chromosome
organization" evidence=RCA] [GO:0042138 "meiotic DNA double-strand
break formation" evidence=RCA] [GO:0043247 "telomere maintenance in
response to DNA damage" evidence=RCA] [GO:0045132 "meiotic
chromosome segregation" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12818 EMBL:AY054692
EMBL:AY128718 IPI:IPI00545738 RefSeq:NP_564296.1 UniGene:At.25438
ProteinModelPortal:Q93Y16 SMR:Q93Y16 PaxDb:Q93Y16 PRIDE:Q93Y16
EnsemblPlants:AT1G27900.1 GeneID:839683 KEGG:ath:AT1G27900
TAIR:At1g27900 InParanoid:Q93Y16 OMA:NCRRFIV PhylomeDB:Q93Y16
ProtClustDB:CLSN2688039 ArrayExpress:Q93Y16 Genevestigator:Q93Y16
Uniprot:Q93Y16
Length = 700
Score = 1123 (400.4 bits), Expect = 7.3e-114, P = 7.3e-114
Identities = 235/600 (39%), Positives = 359/600 (59%)
Query: 585 LPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNGIVGCTQPRRVAAM 644
LPI +++++ + +N GETGSGK+TQL+Q L GYT +G++ TQPRRVAA+
Sbjct: 4 LPILQFEEKIVETVEKNSVVVIIGETGSGKSTQLSQILHRHGYTKSGVIAITQPRRVAAV 63
Query: 645 SVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDSDLDKYRVIVM 704
SVA+RV++E+D LG+ VGYAIRFED T T IKY+TDGVLLRE+L + LD Y VI++
Sbjct: 64 SVARRVAQELDVPLGEDVGYAIRFEDRTTSKTRIKYLTDGVLLRESLSNPMLDDYSVIIL 123
Query: 705 DEAHERSLSTDVLFGILKKVVA-RRRDFKLIVTSATLNAQKFSDFFGSVPIFHIPGRTFP 763
DEAHERSL+TD+L G++K++V R +FK+++TSATL+ +K S+FF P+ ++PG+ +P
Sbjct: 124 DEAHERSLNTDILLGLVKRLVRIRASNFKVLITSATLDGEKVSEFFSGCPVLNVPGKLYP 183
Query: 764 VNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQLISS 823
V LYSK Y+E+++K A+ IH+ P GDILIFMTGQD+IE L+E++ L
Sbjct: 184 VEILYSKERPVSYIESSLKVAIDIHVREPEGDILIFMTGQDDIEKLVSRLEEKVRSLAEG 243
Query: 824 TTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGY 883
+ + +I P++ LP ++Q ++F R+ IV+TNIAETSLTVDG+ YVID+GY
Sbjct: 244 SCMDA---IIYPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDSGY 300
Query: 884 GKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPE 943
K + YNP GM +L V +S CYRLY + Y ++ L + +PE
Sbjct: 301 VKQRQYNPSSGMFSLDVIQISKVQANQRAGRAGRTRPGKCYRLYPLAVYRDDFLDATIPE 360
Query: 944 IQRTNL-GNVVXXXXXXX-XXXXXXFDFMDPPPQENILNSMYQLWVLGALNNVGALTDLG 1001
IQRT+L G+V+ FDF+D P E++ +++ QL+ + A++ GA+T +G
Sbjct: 361 IQRTSLAGSVLYLKSLDLPDIDILKFDFLDAPSSESLEDALKQLYFIDAIDENGAITRIG 420
Query: 1002 WKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAAREKFFV 1061
M + PL+P L++ L+ + GCL + LT+V+MLS + + + E ++
Sbjct: 421 RTMSDLPLEPSLSRTLIEANETGCLSQALTVVAMLSAETTLLPARSKPSEKKRKHDEDSN 480
Query: 1062 QES-----DHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQLLDILKTL-KI 1115
+ DH+ LL +++ W Y WC+E+ + V+ + ++VR QL I++ + K
Sbjct: 481 LPNGSGYGDHIQLLQIFESWDRTNYDPVWCKENGMQVRGMVFVKDVRRQLCQIMQKISKD 540
Query: 1116 PL--------TSSGHDFDVVRKAICSAYFHNAAR--LKGVGEYINCRNGMPCHLHPSSAI 1165
L +SS D+ +RKA+C + A L+ G +HPSS +
Sbjct: 541 RLEVGADGRKSSSRDDYRKLRKALCVGNANQIAERMLRHNGYRTLSFQSQLVQVHPSSVL 600
Score = 181 (68.8 bits), Expect = 6.3e-10, P = 6.3e-10
Identities = 55/185 (29%), Positives = 89/185 (48%)
Query: 1031 TIVSMLSVPSVFFRPKDRAEESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHY 1090
T++ S PS R D E+S+ + DH+ LL +++ W Y WC+E+
Sbjct: 460 TLLPARSKPSEKKRKHD--EDSNLPNGSGY---GDHIQLLQIFESWDRTNYDPVWCKENG 514
Query: 1091 LHVKSLRKAREVRSQLLDILKTL-KIPL--------TSSGHDFDVVRKAICSAYFHNAAR 1141
+ V+ + ++VR QL I++ + K L +SS D+ +RKA+C + A
Sbjct: 515 MQVRGMVFVKDVRRQLCQIMQKISKDRLEVGADGRKSSSRDDYRKLRKALCVGNANQIAE 574
Query: 1142 --LKGVGEYINCRNGMPCHLHPSSAIYGL--GYTPEYVVYHELILTTKEYMQCATAVEPQ 1197
L+ G +HPSS + G P YVVYHELI TT+ +M+ AV+
Sbjct: 575 RMLRHNGYRTLSFQSQLVQVHPSSVLSADNDGMMPNYVVYHELISTTRPFMRNVCAVDMA 634
Query: 1198 WLSEL 1202
W++ +
Sbjct: 635 WVAPI 639
>GENEDB_PFALCIPARUM|PFL1525c [details] [associations]
symbol:PFL1525c "pre-mRNA splicing factor RNA
helicase, putative" species:5833 "Plasmodium falciparum"
[GO:0051726 "regulation of cell cycle" evidence=ISS] [GO:0008380
"RNA splicing" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008380 GO:GO:0005681
GO:GO:0003676 GO:GO:0051726 EMBL:AE014188 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509 RefSeq:XP_001350711.1
ProteinModelPortal:Q8I5A4 IntAct:Q8I5A4 MINT:MINT-1581184
PRIDE:Q8I5A4 EnsemblProtists:PFL1525c:mRNA GeneID:811357
KEGG:pfa:PFL1525c EuPathDB:PlasmoDB:PF3D7_1231600
ProtClustDB:CLSZ2514931 Uniprot:Q8I5A4
Length = 1168
Score = 623 (224.4 bits), Expect = 5.8e-110, Sum P(4) = 5.8e-110
Identities = 138/354 (38%), Positives = 216/354 (61%)
Query: 502 REIREKQTQN-KSRQRFWELAGSQMGNILGVKKTAEQVDADTAVVGEQGEIDFREDAKFS 560
+ I + +N S +R +E S++ N G+ E V ++ + E +E K
Sbjct: 362 KSIMTDEERNVDSNKRSFEKKESEL-NENGLTDVVEFVHLESFYGMNEKE---KELEKLF 417
Query: 561 QHMKKGEAVSDFAKSKTLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQ 620
+ +KK + K K + ++R+ LPI+S R ++L+ I+ N+ GETGSGK+TQLTQ
Sbjct: 418 EDIKKRKE----KKMKKIIDERKRLPIYSYRYDILKAIKNNKILILVGETGSGKSTQLTQ 473
Query: 621 YLLEDGYTTNGIVGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKY 680
YL E Y G + CTQPRR+A +++A RV+EEM+ ++G +VGY IRF++ T +T I Y
Sbjct: 474 YLYECKYHMYGNIICTQPRRIACIAIANRVAEEMNVKIGKEVGYVIRFQNKTSEATKIMY 533
Query: 681 MTDGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATL 740
MTDG+ LR L + L+ V+++DEAHER+L TDV+ I+K + R + +++++SATL
Sbjct: 534 MTDGMFLRLLLYNPTLEDISVLIIDEAHERALHTDVILPIVKDICNFRENIRVVISSATL 593
Query: 741 NAQKFSDFFGSVPIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFM 800
+A+K S +F PIF++PGR + V+ Y+ +Y+ A V + IHIT GDIL+F+
Sbjct: 594 DAEKISTYFNCAPIFYVPGRKYNVDIYYTINNESNYISAIVITILQIHITQGKGDILVFL 653
Query: 801 TGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKE 854
GQ EIE +++ +E ++ + L+ILPIYS LP + QA+IFE E
Sbjct: 654 PGQYEIEL----VQQELENKLNELAPKYRNLVILPIYSSLPVEYQARIFEDVTE 703
Score = 515 (186.3 bits), Expect = 5.8e-110, Sum P(4) = 5.8e-110
Identities = 113/362 (31%), Positives = 198/362 (54%)
Query: 857 RKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXX 916
RK I++TNI ETS+T+D I YVID+G K K+YNP G+++L P S
Sbjct: 803 RKIILSTNICETSITIDNIVYVIDSGLCKQKIYNPNSGIESLVTLPCSKASVNQRTGRAG 862
Query: 917 XXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQE 976
C+RL+T+ +++ ++ + +PEIQR + +++ FDF+DPP
Sbjct: 863 RKRDGKCFRLFTKKSFI-DLSDNSIPEIQRCEISSMILLLKSLGMDDIINFDFLDPPSPI 921
Query: 977 NILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMG-EQLGCLDEVLTIVSM 1035
I+ + L+ LGALN+ G LT G KM EFP D +KM+L E+ C+DE+L + SM
Sbjct: 922 VIIKGLELLYSLGALNDEGNLTRTGRKMAEFPTDVKSSKMILSAAEKYNCVDEILNVASM 981
Query: 1036 LS-VPSVFFRPKDRAEESDAAREKFFVQES-DHLTLLYVYQQWKEHQYRGDWCEEHYLHV 1093
L+ ++F+ K + +E++ ++ F ++ D L L +Y+Q +E+ + +C +H+L
Sbjct: 982 LTHANNIFYVQKGKEKEAENIKKMFIIEGGGDFLLFLNIYKQCEENNFSTSFCYDHFLQY 1041
Query: 1094 KSLRKAREVRSQLLDILKTLKIPLTSSG---HD-FDVVRKAICSAYFHNAARLKGVGEYI 1149
+L K ++V++QLL I + + IP+T+ G H+ + ++K+I SA+F NAA E
Sbjct: 1042 HTLIKVKDVKTQLLSICEKIDIPITTCGIENHESINNIKKSIVSAFFTNAALPVNKTELK 1101
Query: 1150 NCRNGMPCHLHPSSAIYGLGYTPEY----VVYHELILTTKEYMQCATAVEPQWLSELGPM 1205
+ ++P+S ++ E ++++E+I K Y++ V L ++
Sbjct: 1102 IIKLNQVVSIYPNSVLFKKNIMEENENVCIIFYEVIKLNKSYIRHNIPVNKNLLFQIADF 1161
Query: 1206 FF 1207
+F
Sbjct: 1162 YF 1163
Score = 71 (30.1 bits), Expect = 5.8e-110, Sum P(4) = 5.8e-110
Identities = 19/74 (25%), Positives = 38/74 (51%)
Query: 326 RESSQSFEDGV-ADETY-SEEHNYEITESMRLEMEYNSDRAWYDREEGTTMFDTDSSSFI 383
+E + S+++ D TY SEE + + +Y+SD+ +++++ TD +
Sbjct: 313 KELNTSYDNNSPTDSTYKSEEESSSSGDKNHRNNKYDSDKIKHEKKKKKKSIMTDEERNV 372
Query: 384 LGDDASYQKKEVEL 397
+ S++KKE EL
Sbjct: 373 DSNKRSFEKKESEL 386
Score = 63 (27.2 bits), Expect = 6.5e-108, Sum P(3) = 6.5e-108
Identities = 14/68 (20%), Positives = 28/68 (41%)
Query: 162 RHDRDDRGSER-KYLKDDTRSESRGPSRRDNYDSKGRYRGREARDRDEPEYGGEYGRKRS 220
+HD+ D+ + K+ K D + + D D ++ + D+ +Y +Y +
Sbjct: 258 KHDKHDKYDKHDKHDKHDKHDKHDKHDKHDKNDKHDKHDKHDKHDKHNKKYHSKYKELNT 317
Query: 221 KYDGTRRT 228
YD T
Sbjct: 318 SYDNNSPT 325
Score = 55 (24.4 bits), Expect = 5.8e-110, Sum P(4) = 5.8e-110
Identities = 18/90 (20%), Positives = 43/90 (47%)
Query: 171 ERKYLKDDTRSESRGPSRRDNYDSKGRYRGREARDR-DEPEYGGEYGR--KRSKYDGTRR 227
++K KDD S+++ + + YD G++ R+ + D+ + +Y + K K+D +
Sbjct: 221 KKKKRKDDIESDNKC-DKDEKYDKYGKFYKRDKHHKYDKHDKHDKYDKHDKHDKHDKHDK 279
Query: 228 TPGRSDWDDGRWEWEDTPRREGYSNSSKRY 257
+ D D + + + + + +K+Y
Sbjct: 280 HD-KHDKHDKNDKHDKHDKHDKHDKHNKKY 308
Score = 50 (22.7 bits), Expect = 1.5e-106, Sum P(3) = 1.5e-106
Identities = 13/65 (20%), Positives = 28/65 (43%)
Query: 162 RHDRDDRGSERKYLKDDTRSESRGPSRRDNYDSKGRYRGREARDRDEPEYGGEYGRKRSK 221
+HD+ D+ K+ K + + S+ +YD+ + +E G+ + +K
Sbjct: 291 KHDKHDKHD--KHDKHNKKYHSKYKELNTSYDNNSP-TDSTYKSEEESSSSGDKNHRNNK 347
Query: 222 YDGTR 226
YD +
Sbjct: 348 YDSDK 352
Score = 49 (22.3 bits), Expect = 2.5e-109, Sum P(4) = 2.5e-109
Identities = 12/61 (19%), Positives = 26/61 (42%)
Query: 164 DRDDRGSER-KYLKDDTRSESRGPSRRDNYDSKGRYRGREARDRDEPEYGGEYGRKRSKY 222
D+D++ + K+ K D + + D YD ++ + D+ + + K K+
Sbjct: 236 DKDEKYDKYGKFYKRDKHHKYDKHDKHDKYDKHDKHDKHDKHDKHDKHDKHDKNDKHDKH 295
Query: 223 D 223
D
Sbjct: 296 D 296
Score = 39 (18.8 bits), Expect = 3.2e-60, Sum P(4) = 3.2e-60
Identities = 7/21 (33%), Positives = 14/21 (66%)
Query: 1223 QKESKTAMEEEMENLRKIQAD 1243
Q ++K + EE+E L++I +
Sbjct: 778 QSKNKRNINEEIEELKRINTN 798
Score = 39 (18.8 bits), Expect = 3.2e-60, Sum P(4) = 3.2e-60
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 1215 SMLEHKKKQKESKTAMEEEMENLRKI 1240
SML H + E+E EN++K+
Sbjct: 980 SMLTHANNIFYVQKGKEKEAENIKKM 1005
Score = 38 (18.4 bits), Expect = 3.5e-108, Sum P(4) = 3.5e-108
Identities = 12/59 (20%), Positives = 25/59 (42%)
Query: 165 RDDRGSERKYLKDDTRSESRGPSRRDNYDSKGRYRGREARDRDEPEYGGEYGRKRSKYD 223
+DD S+ K KD+ + +RD + ++ + D+ + + K K+D
Sbjct: 226 KDDIESDNKCDKDEKYDKYGKFYKRDKHHKYDKHDKHDKYDKHDKHDKHDKHDKHDKHD 284
>UNIPROTKB|Q8I5A4 [details] [associations]
symbol:PFL1525c "Pre-mRNA splicing factor RNA helicase,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0008380 "RNA splicing"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0008380 GO:GO:0005681 GO:GO:0003676
GO:GO:0051726 EMBL:AE014188 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 KO:K01509 RefSeq:XP_001350711.1
ProteinModelPortal:Q8I5A4 IntAct:Q8I5A4 MINT:MINT-1581184
PRIDE:Q8I5A4 EnsemblProtists:PFL1525c:mRNA GeneID:811357
KEGG:pfa:PFL1525c EuPathDB:PlasmoDB:PF3D7_1231600
ProtClustDB:CLSZ2514931 Uniprot:Q8I5A4
Length = 1168
Score = 623 (224.4 bits), Expect = 5.8e-110, Sum P(4) = 5.8e-110
Identities = 138/354 (38%), Positives = 216/354 (61%)
Query: 502 REIREKQTQN-KSRQRFWELAGSQMGNILGVKKTAEQVDADTAVVGEQGEIDFREDAKFS 560
+ I + +N S +R +E S++ N G+ E V ++ + E +E K
Sbjct: 362 KSIMTDEERNVDSNKRSFEKKESEL-NENGLTDVVEFVHLESFYGMNEKE---KELEKLF 417
Query: 561 QHMKKGEAVSDFAKSKTLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQ 620
+ +KK + K K + ++R+ LPI+S R ++L+ I+ N+ GETGSGK+TQLTQ
Sbjct: 418 EDIKKRKE----KKMKKIIDERKRLPIYSYRYDILKAIKNNKILILVGETGSGKSTQLTQ 473
Query: 621 YLLEDGYTTNGIVGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKY 680
YL E Y G + CTQPRR+A +++A RV+EEM+ ++G +VGY IRF++ T +T I Y
Sbjct: 474 YLYECKYHMYGNIICTQPRRIACIAIANRVAEEMNVKIGKEVGYVIRFQNKTSEATKIMY 533
Query: 681 MTDGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATL 740
MTDG+ LR L + L+ V+++DEAHER+L TDV+ I+K + R + +++++SATL
Sbjct: 534 MTDGMFLRLLLYNPTLEDISVLIIDEAHERALHTDVILPIVKDICNFRENIRVVISSATL 593
Query: 741 NAQKFSDFFGSVPIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFM 800
+A+K S +F PIF++PGR + V+ Y+ +Y+ A V + IHIT GDIL+F+
Sbjct: 594 DAEKISTYFNCAPIFYVPGRKYNVDIYYTINNESNYISAIVITILQIHITQGKGDILVFL 653
Query: 801 TGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKE 854
GQ EIE +++ +E ++ + L+ILPIYS LP + QA+IFE E
Sbjct: 654 PGQYEIEL----VQQELENKLNELAPKYRNLVILPIYSSLPVEYQARIFEDVTE 703
Score = 515 (186.3 bits), Expect = 5.8e-110, Sum P(4) = 5.8e-110
Identities = 113/362 (31%), Positives = 198/362 (54%)
Query: 857 RKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXX 916
RK I++TNI ETS+T+D I YVID+G K K+YNP G+++L P S
Sbjct: 803 RKIILSTNICETSITIDNIVYVIDSGLCKQKIYNPNSGIESLVTLPCSKASVNQRTGRAG 862
Query: 917 XXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQE 976
C+RL+T+ +++ ++ + +PEIQR + +++ FDF+DPP
Sbjct: 863 RKRDGKCFRLFTKKSFI-DLSDNSIPEIQRCEISSMILLLKSLGMDDIINFDFLDPPSPI 921
Query: 977 NILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMG-EQLGCLDEVLTIVSM 1035
I+ + L+ LGALN+ G LT G KM EFP D +KM+L E+ C+DE+L + SM
Sbjct: 922 VIIKGLELLYSLGALNDEGNLTRTGRKMAEFPTDVKSSKMILSAAEKYNCVDEILNVASM 981
Query: 1036 LS-VPSVFFRPKDRAEESDAAREKFFVQES-DHLTLLYVYQQWKEHQYRGDWCEEHYLHV 1093
L+ ++F+ K + +E++ ++ F ++ D L L +Y+Q +E+ + +C +H+L
Sbjct: 982 LTHANNIFYVQKGKEKEAENIKKMFIIEGGGDFLLFLNIYKQCEENNFSTSFCYDHFLQY 1041
Query: 1094 KSLRKAREVRSQLLDILKTLKIPLTSSG---HD-FDVVRKAICSAYFHNAARLKGVGEYI 1149
+L K ++V++QLL I + + IP+T+ G H+ + ++K+I SA+F NAA E
Sbjct: 1042 HTLIKVKDVKTQLLSICEKIDIPITTCGIENHESINNIKKSIVSAFFTNAALPVNKTELK 1101
Query: 1150 NCRNGMPCHLHPSSAIYGLGYTPEY----VVYHELILTTKEYMQCATAVEPQWLSELGPM 1205
+ ++P+S ++ E ++++E+I K Y++ V L ++
Sbjct: 1102 IIKLNQVVSIYPNSVLFKKNIMEENENVCIIFYEVIKLNKSYIRHNIPVNKNLLFQIADF 1161
Query: 1206 FF 1207
+F
Sbjct: 1162 YF 1163
Score = 71 (30.1 bits), Expect = 5.8e-110, Sum P(4) = 5.8e-110
Identities = 19/74 (25%), Positives = 38/74 (51%)
Query: 326 RESSQSFEDGV-ADETY-SEEHNYEITESMRLEMEYNSDRAWYDREEGTTMFDTDSSSFI 383
+E + S+++ D TY SEE + + +Y+SD+ +++++ TD +
Sbjct: 313 KELNTSYDNNSPTDSTYKSEEESSSSGDKNHRNNKYDSDKIKHEKKKKKKSIMTDEERNV 372
Query: 384 LGDDASYQKKEVEL 397
+ S++KKE EL
Sbjct: 373 DSNKRSFEKKESEL 386
Score = 63 (27.2 bits), Expect = 6.5e-108, Sum P(3) = 6.5e-108
Identities = 14/68 (20%), Positives = 28/68 (41%)
Query: 162 RHDRDDRGSER-KYLKDDTRSESRGPSRRDNYDSKGRYRGREARDRDEPEYGGEYGRKRS 220
+HD+ D+ + K+ K D + + D D ++ + D+ +Y +Y +
Sbjct: 258 KHDKHDKYDKHDKHDKHDKHDKHDKHDKHDKNDKHDKHDKHDKHDKHNKKYHSKYKELNT 317
Query: 221 KYDGTRRT 228
YD T
Sbjct: 318 SYDNNSPT 325
Score = 55 (24.4 bits), Expect = 5.8e-110, Sum P(4) = 5.8e-110
Identities = 18/90 (20%), Positives = 43/90 (47%)
Query: 171 ERKYLKDDTRSESRGPSRRDNYDSKGRYRGREARDR-DEPEYGGEYGR--KRSKYDGTRR 227
++K KDD S+++ + + YD G++ R+ + D+ + +Y + K K+D +
Sbjct: 221 KKKKRKDDIESDNKC-DKDEKYDKYGKFYKRDKHHKYDKHDKHDKYDKHDKHDKHDKHDK 279
Query: 228 TPGRSDWDDGRWEWEDTPRREGYSNSSKRY 257
+ D D + + + + + +K+Y
Sbjct: 280 HD-KHDKHDKNDKHDKHDKHDKHDKHNKKY 308
Score = 50 (22.7 bits), Expect = 1.5e-106, Sum P(3) = 1.5e-106
Identities = 13/65 (20%), Positives = 28/65 (43%)
Query: 162 RHDRDDRGSERKYLKDDTRSESRGPSRRDNYDSKGRYRGREARDRDEPEYGGEYGRKRSK 221
+HD+ D+ K+ K + + S+ +YD+ + +E G+ + +K
Sbjct: 291 KHDKHDKHD--KHDKHNKKYHSKYKELNTSYDNNSP-TDSTYKSEEESSSSGDKNHRNNK 347
Query: 222 YDGTR 226
YD +
Sbjct: 348 YDSDK 352
Score = 49 (22.3 bits), Expect = 2.5e-109, Sum P(4) = 2.5e-109
Identities = 12/61 (19%), Positives = 26/61 (42%)
Query: 164 DRDDRGSER-KYLKDDTRSESRGPSRRDNYDSKGRYRGREARDRDEPEYGGEYGRKRSKY 222
D+D++ + K+ K D + + D YD ++ + D+ + + K K+
Sbjct: 236 DKDEKYDKYGKFYKRDKHHKYDKHDKHDKYDKHDKHDKHDKHDKHDKHDKHDKNDKHDKH 295
Query: 223 D 223
D
Sbjct: 296 D 296
Score = 39 (18.8 bits), Expect = 3.2e-60, Sum P(4) = 3.2e-60
Identities = 7/21 (33%), Positives = 14/21 (66%)
Query: 1223 QKESKTAMEEEMENLRKIQAD 1243
Q ++K + EE+E L++I +
Sbjct: 778 QSKNKRNINEEIEELKRINTN 798
Score = 39 (18.8 bits), Expect = 3.2e-60, Sum P(4) = 3.2e-60
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 1215 SMLEHKKKQKESKTAMEEEMENLRKI 1240
SML H + E+E EN++K+
Sbjct: 980 SMLTHANNIFYVQKGKEKEAENIKKM 1005
Score = 38 (18.4 bits), Expect = 3.5e-108, Sum P(4) = 3.5e-108
Identities = 12/59 (20%), Positives = 25/59 (42%)
Query: 165 RDDRGSERKYLKDDTRSESRGPSRRDNYDSKGRYRGREARDRDEPEYGGEYGRKRSKYD 223
+DD S+ K KD+ + +RD + ++ + D+ + + K K+D
Sbjct: 226 KDDIESDNKCDKDEKYDKYGKFYKRDKHHKYDKHDKHDKYDKHDKHDKHDKHDKHDKHD 284
>UNIPROTKB|G4MKC3 [details] [associations]
symbol:MGG_02518 "ATP-dependent RNA helicase DHX8"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:CM001231 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K13117 RefSeq:XP_003709326.1 EnsemblFungi:MGG_02518T0
GeneID:2681615 KEGG:mgr:MGG_02518 Uniprot:G4MKC3
Length = 671
Score = 1065 (380.0 bits), Expect = 1.0e-107, P = 1.0e-107
Identities = 228/552 (41%), Positives = 337/552 (61%)
Query: 585 LPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNG-IVGCTQPRRVAA 643
LPI +D LL V+ N G+TGSGKTTQ+ Q+L + G+ ++G ++G TQPRR+AA
Sbjct: 21 LPIARHKDSLLYVVESNPVTVVVGQTGSGKTTQIPQFLEKAGWCSDGKLIGVTQPRRIAA 80
Query: 644 MSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDSDLDKYRVIV 703
+VA RV+EE +E+G +VGY+IRFEDVT +T IK++TDG+L+RE L D L +Y +++
Sbjct: 81 TTVALRVAEEYGSEVGKEVGYSIRFEDVTSEATRIKFLTDGLLIREALVDPLLSRYSIVM 140
Query: 704 MDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSV----------P 753
+DEAHERS+STD+L G+LKK+ +R + ++I++SATL A++F FF S P
Sbjct: 141 VDEAHERSVSTDILLGLLKKIRKKRPELRIIISSATLQAEQFLAFFSSTLGGSRQDREEP 200
Query: 754 ------IFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIE 807
I + GRT+P++ LY ++P EDY++ AV + +H P GDIL+F+TG+DEIE
Sbjct: 201 QGTIGTIVSLEGRTYPIDILYLESPAEDYLQRAVSTVLDVHENEPDGDILVFLTGRDEIE 260
Query: 808 AACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAE 867
AA A+ ER L S +P LP++S L + Q IFE+A TRK I +TNIAE
Sbjct: 261 AAVDAVSERTAHLTSQDRGLLP----LPLFSGLSTEQQMYIFEEAPANTRKVIFSTNIAE 316
Query: 868 TSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLY 927
S+T+ GI YV+D+G+ K++ YNPK G++ L P+S C+RLY
Sbjct: 317 ASVTISGIVYVVDSGFVKLRAYNPKTGIETLTAVPISKAAAAQRAGRAGRTKPGKCFRLY 376
Query: 928 TESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWV 987
TE +Y + + + +PE+QR+NL + FDF+ PPP E + ++ L+
Sbjct: 377 TEESYTS-LSDTNIPEVQRSNLAPFILQLKALGIDNVLHFDFLTPPPAELMTKALELLYS 435
Query: 988 LGALNNVGALTD-LGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPS-VFFRP 1045
LGAL++ LT LG +M E +DP +AK LL E GCL E+LTI +M S V+ +
Sbjct: 436 LGALDDYAKLTKPLGLRMAELAVDPMMAKTLLSAESFGCLSEMLTIAAMTSAGGDVWIQH 495
Query: 1046 KDRAEESDAAREKFFVQESDHLTLLYVYQQW--KEHQYRGDWCEEHYLHVKSLRKAREVR 1103
+ ++ ++ R KF E DHLT L VYQ + K + G +C E+ L+ K++ +A +R
Sbjct: 496 EGERKQFESRRRKFAAGEGDHLTFLNVYQAFVTKGRKESG-FCHENLLNYKTMSRAVSIR 554
Query: 1104 SQLLDILKTLKI 1115
+QL L+ I
Sbjct: 555 AQLKRYLERFGI 566
Score = 761 (272.9 bits), Expect = 8.4e-75, P = 8.4e-75
Identities = 178/510 (34%), Positives = 277/510 (54%)
Query: 720 ILKKVVARRRDFKLIVTSATLNA--QKFSDFFGSV-PIFHIPGRTFPVNTLYSKTPCEDY 776
I+ + F L S+TL Q + G++ I + GRT+P++ LY ++P EDY
Sbjct: 171 IISSATLQAEQF-LAFFSSTLGGSRQDREEPQGTIGTIVSLEGRTYPIDILYLESPAEDY 229
Query: 777 VEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPI 836
++ AV + +H P GDIL+F+TG+DEIEAA A+ ER L S +P LP+
Sbjct: 230 LQRAVSTVLDVHENEPDGDILVFLTGRDEIEAAVDAVSERTAHLTSQDRGLLP----LPL 285
Query: 837 YSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMD 896
+S L + Q IFE+A TRK I +TNIAE S+T+ GI YV+D+G+ K++ YNPK G++
Sbjct: 286 FSGLSTEQQMYIFEEAPANTRKVIFSTNIAEASVTISGIVYVVDSGFVKLRAYNPKTGIE 345
Query: 897 ALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXX 956
L P+S C+RLYTE +Y + + + +PE+QR+NL +
Sbjct: 346 TLTAVPISKAAAAQRAGRAGRTKPGKCFRLYTEESYTS-LSDTNIPEVQRSNLAPFILQL 404
Query: 957 XXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNVGALTD-LGWKMVEFPLDPPLAK 1015
FDF+ PPP E + ++ L+ LGAL++ LT LG +M E +DP +AK
Sbjct: 405 KALGIDNVLHFDFLTPPPAELMTKALELLYSLGALDDYAKLTKPLGLRMAELAVDPMMAK 464
Query: 1016 MLLMGEQLGCLDEVLTIVSMLSVPS-VFFRPKDRAEESDAAREKFFVQESDHLTLLYVYQ 1074
LL E GCL E+LTI +M S V+ + + ++ ++ R KF E DHLT L VYQ
Sbjct: 465 TLLSAESFGCLSEMLTIAAMTSAGGDVWIQHEGERKQFESRRRKFAAGEGDHLTFLNVYQ 524
Query: 1075 QW--KEHQYRGDWCEEHYLHVKSLRKAREVRSQLLDILKTLKIPL-----------TSSG 1121
+ K + G +C E+ L+ K++ +A +R+QL L+ I + S G
Sbjct: 525 AFVTKGRKESG-FCHENLLNYKTMSRAVSIRAQLKRYLERFGIRVDETLASGKTRGASPG 583
Query: 1122 HDFDVVRKAICSAYFHNAARLKGVGEYINCRNGMPCHLHPSSAIYGLGYTPEYVVYHELI 1181
+ +R+ + + YF +AAR++ G + + G H HPSS ++ ++V++HE++
Sbjct: 584 VTGEQIRRCLTTGYFAHAARMQADGTFQTVQGGTTLHAHPSSLMFNR--KADWVIFHEVM 641
Query: 1182 LT-TKEYMQCATAVEPQWLSELGPMFFSVK 1210
T K +++ + VE WL E P F+ VK
Sbjct: 642 ETGAKTFIRDISKVEKCWLLEYAPDFYQVK 671
>UNIPROTKB|I3L1L6 [details] [associations]
symbol:DHX33 "Putative ATP-dependent RNA helicase DHX33"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AC004148 HGNC:HGNC:16718 ChiTaRS:DHX33
Ensembl:ENST00000572490 Uniprot:I3L1L6
Length = 617
Score = 1063 (379.3 bits), Expect = 1.7e-107, P = 1.7e-107
Identities = 228/569 (40%), Positives = 323/569 (56%)
Query: 651 SEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDSDLDKYRVIVMDEAHER 710
S E T VGY +RF+DVT T IK++TDG+LLRE + DS L KY +++DEAHER
Sbjct: 50 SSETWTTRSSSVGYTVRFDDVTSEDTRIKFLTDGMLLREAISDSLLRKYSCVILDEAHER 109
Query: 711 SLSTDVLFGILKKVVARRRDF-----KLIVTSATLNAQKFSDFFGSVPIFHIPGRTFPVN 765
++ TDVLFG++K RR++ K+IV SAT++ FS +F P+ ++ GR P+
Sbjct: 110 TIHTDVLFGVVKAAQKRRKELGKLPLKVIVMSATMDVDLFSQYFNGAPVLYLEGRQHPIQ 169
Query: 766 TLYSKTPCEDYVEAAVKQAMTIHITSPPG-DILIFMTGQDEIEAACFALKERMEQLISST 824
Y+K P DY+ AA+ IH +P DIL+F+TGQ+EIEA ++ + L
Sbjct: 170 VFYTKQPQNDYLHAALVSVFQIHQEAPSSQDILVFLTGQEEIEAMSKTCRDIAKHLPDGC 229
Query: 825 TREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYG 884
P +L+LP+Y+ LP Q ++F+ A +G RK I++TNIAETS+T+ GI YV+DTG
Sbjct: 230 ----PAMLVLPLYASLPYAQQLRVFQGAPKGYRKVIISTNIAETSITITGIKYVVDTGMV 285
Query: 885 KMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEI 944
K K YNP G++ L V VS CYRLYTE + + VPEI
Sbjct: 286 KAKKYNPDSGLEVLAVQRVSKTQAWQRTGRAGREDSGICYRLYTEDEF-EKFDKMTVPEI 344
Query: 945 QRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNVG---ALTDLG 1001
QR NL +V+ FDFM P ++I ++ QL +LGAL + LT +G
Sbjct: 345 QRCNLASVMLQLLAMKVPNVLTFDFMSKPSPDHIQAAIAQLDLLGALEHKDDQLTLTPMG 404
Query: 1002 WKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAAREKFFV 1061
KM FPL+P AK +LM + C +E+LTIVS+LSV SV P R EE R+KF
Sbjct: 405 RKMAAFPLEPKFAKTILMSPKFHCTEEILTIVSLLSVDSVLHNPPSRREEVQGVRKKFIS 464
Query: 1062 QESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQLLDILKTLKIPLTSSG 1121
E DH+TLL +Y+ +K DWC+E++++ K++ EVR+QL DI + +P+ SS
Sbjct: 465 SEGDHMTLLNIYRTFKNLGGNKDWCKENFVNSKNMTLVAEVRAQLRDICLKMSMPIASSR 524
Query: 1122 HDFDVVRKAICSAYFHNAARLKGVGEYINCRNGMPCHLHPSSAIYGLGYTPEYVVYHELI 1181
D + VR+ + + F + A L+ G Y P +HPSS ++ P VVY EL+
Sbjct: 525 GDVESVRRCLAHSLFMSTAELQPDGTYATTDTHQPVAIHPSSVLFHC--KPACVVYTELL 582
Query: 1182 LTTKEYMQCATAVEPQWLSELGPMFFSVK 1210
T K YM+ ++ QWL E P +F K
Sbjct: 583 YTNKCYMRDLCVIDAQWLYEAAPEYFRRK 611
>UNIPROTKB|C9JEW8 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HGNC:HGNC:18018 ChiTaRS:DHX40 EMBL:AC091271
EMBL:AC004167 IPI:IPI00789290 ProteinModelPortal:C9JEW8 SMR:C9JEW8
STRING:C9JEW8 Ensembl:ENST00000451169 ArrayExpress:C9JEW8
Bgee:C9JEW8 Uniprot:C9JEW8
Length = 731
Score = 605 (218.0 bits), Expect = 3.4e-107, Sum P(2) = 3.4e-107
Identities = 133/411 (32%), Positives = 224/411 (54%)
Query: 845 QAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVS 904
Q +IF G RKC+++TNI+ TSLT+DGI YV+D G+ K +NP++G+D L+V P+S
Sbjct: 279 QRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPIS 338
Query: 905 XXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPV-PEIQRTNLGNVVXXXXXXXXXX 963
C+R+Y++ + N+ +P V PEI+RT+L +VV
Sbjct: 339 KSEALQRSGRAGRTSSGKCFRIYSKD-FWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHD 397
Query: 964 XXXFDFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQL 1023
F ++DPP + IL ++ QL+ A++ G +T LG MVEFPL P L ++ L
Sbjct: 398 VIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAVIKAASL 457
Query: 1024 GCLDEVLTIVSMLSVPSVFFRPKDRAEESDAA-REKFFVQES----DHLTLLYVYQQWKE 1078
C D +L I +MLSV +VF RP D + +A R + ++ D TL +++Q K
Sbjct: 458 DCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAAKAGGFNDFATLAVIFEQCKS 517
Query: 1079 HQYRGDWCEEHYLHVKSLRKAREVRSQLLDILKTLK----IPL-TSSGHDFDVVRKAICS 1133
WC++H++H + L A V +QL ++++ LK P T G +V+R+ +C+
Sbjct: 518 SGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDFPKETFEGPKHEVLRRCLCA 577
Query: 1134 AYFHNAARLKGVGEYINCR---NGMPCHLHPSSAIYGLGYTPEYVVYHELILTTKEYMQC 1190
YF N AR + VG C G P H+HPSSA++ E++++HE+++TTK Y +
Sbjct: 578 GYFKNVAR-RSVGRTF-CTMDGRGSPVHIHPSSALHEQETKLEWIIFHEVLVTTKVYARI 635
Query: 1191 ATAVEPQWLSELGPMFFSVKDSDTSMLEHKKKQKESKTAMEEEMENLRKIQ 1241
+ +W+ +L P D S + ++ +++++ + EN+++++
Sbjct: 636 VCPIRYEWVRDLLPKLHEFNAHDLSSVARREVREDARRRWTNK-ENVKQLK 685
Score = 495 (179.3 bits), Expect = 3.4e-107, Sum P(2) = 3.4e-107
Identities = 115/260 (44%), Positives = 155/260 (59%)
Query: 632 IVGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETL 691
++G TQPR+VAA+SVA+RV+EEM LG KVGY +RF+D + T IKYMTDG LL+ L
Sbjct: 1 MIGVTQPRKVAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHIL 60
Query: 692 KDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVA-----RRRDFKLIVTSATLNAQKFS 746
D +L K+ VI++DEAHER+L+TD+LFG+LKK+ R+ K++V SAT+ K S
Sbjct: 61 GDPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLS 120
Query: 747 DFFGSVPIFHIPGRTFPVN----TLYSKTPCED--YVEAAVKQAMTIHITSPPGDILIFM 800
FFG+ PIF IPGR +PV L E+ Y++A VK M IH+ GDIL+F+
Sbjct: 121 AFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFL 180
Query: 801 TGQDEIEAACFALKERMEQL-----ISSTTREVPELLILPIYSQLPADLQAKIFEKAKEG 855
TGQ EIE +C L + E + + TT + LLILP Y + Q +
Sbjct: 181 TGQFEIEKSCELLFQMAESVDYDYDVQDTTLD--GLLILPCYGSMTTVSQTSLTFVTHIQ 238
Query: 856 TRKCIVATNIAETSLTVDGI 875
K I + T LT+ GI
Sbjct: 239 IMKQISENQHSLTGLTIAGI 258
>ASPGD|ASPL0000052850 [details] [associations]
symbol:AN1363 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:BN001308 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K13117
EMBL:AACD01000018 OrthoDB:EOG4BGD47 RefSeq:XP_658967.1
EnsemblFungi:CADANIAT00001248 GeneID:2877144 KEGG:ani:AN1363.2
OMA:VAEEMRC Uniprot:Q5BDL7
Length = 670
Score = 1057 (377.1 bits), Expect = 7.2e-107, P = 7.2e-107
Identities = 235/559 (42%), Positives = 336/559 (60%)
Query: 577 TLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNG-IVGC 635
+L + LPI + +L ++ G+TGSGKTTQL QYL + G+ T G +
Sbjct: 14 SLYKPASLLPIARHKQSILYLVETYPVTIVVGQTGSGKTTQLPQYLDQAGWCTEGKAIAV 73
Query: 636 TQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDSD 695
TQPRRVAA +VA RV+EEM +LG+ VGY+IRFED T T IK++TDG+LLRE L D
Sbjct: 74 TQPRRVAATTVAARVAEEMRCKLGEDVGYSIRFEDRTSAMTRIKFLTDGMLLREALVDPL 133
Query: 696 LDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFF------ 749
L +Y VI++DEAHERSLSTD+L GILKK++ RR + ++IV+SATL A+ F +F
Sbjct: 134 LSRYSVIMVDEAHERSLSTDILLGILKKILKRRPELRIIVSSATLQAEDFLRYFAGDESQ 193
Query: 750 ----GSV-----PIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFM 800
G V I I GR +PV+TL+ ++ E+YVE +VK IH+ GDILIF+
Sbjct: 194 QGPNGEVGGNTGKIISIEGRMYPVDTLFLESAAENYVERSVKTVFDIHLQEGEGDILIFL 253
Query: 801 TGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCI 860
TG++EIE A + ER L + LL LP+Y+ L D Q +FE A E TRK +
Sbjct: 254 TGREEIETAIQLISERATTLHPKSQ----SLLPLPLYAGLTTDQQMYVFEPAPENTRKVV 309
Query: 861 VATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXX 920
V+TNIAE S+T++GI YV+D G+ K++ Y+P G++ L P+S
Sbjct: 310 VSTNIAEASVTINGIVYVVDCGFAKLRAYDPSTGIETLTAVPISKAAAVQRAGRAGRTKP 369
Query: 921 XXCYRLYTESAYLNEMLP-SPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENIL 979
C+RLYT+ AY E LP + +PEIQR+NL V+ FDF+ PP + ++
Sbjct: 370 GKCFRLYTQHAY--EQLPDATIPEIQRSNLAPVIMQLKALGIDNIVRFDFLTSPPADLVI 427
Query: 980 NSMYQLWVLGALNNVGALTD-LGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSV 1038
+ L+ LGA+++ LT LG +M E +DP +AK+LL + GCL E+LTI +M+S+
Sbjct: 428 RAFELLYSLGAIDDYAKLTKPLGMRMAELAVDPMMAKVLLSAQSFGCLSEILTIAAMVSL 487
Query: 1039 P-SVFFRPKDRAEESDAAREKFFVQESDHLTLLYVYQQW-KEHQYRGDWCEEHYLHVKSL 1096
+V+ + + S+++R KF V+E DHLT L VYQ + + + WC ++ L+ +SL
Sbjct: 488 QGAVWVQHDGDKKSSESSRRKFAVEEGDHLTYLNVYQAFVTKGKKESKWCRDNLLNYRSL 547
Query: 1097 RKAREVRSQLLDILKTLKI 1115
+A VR+QL L+ I
Sbjct: 548 LRAVSVRAQLKRYLERFGI 566
Score = 754 (270.5 bits), Expect = 4.9e-74, P = 4.9e-74
Identities = 168/472 (35%), Positives = 268/472 (56%)
Query: 754 IFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFAL 813
I I GR +PV+TL+ ++ E+YVE +VK IH+ GDILIF+TG++EIE A +
Sbjct: 207 IISIEGRMYPVDTLFLESAAENYVERSVKTVFDIHLQEGEGDILIFLTGREEIETAIQLI 266
Query: 814 KERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVD 873
ER L + LL LP+Y+ L D Q +FE A E TRK +V+TNIAE S+T++
Sbjct: 267 SERATTLHPKSQ----SLLPLPLYAGLTTDQQMYVFEPAPENTRKVVVSTNIAEASVTIN 322
Query: 874 GIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYL 933
GI YV+D G+ K++ Y+P G++ L P+S C+RLYT+ AY
Sbjct: 323 GIVYVVDCGFAKLRAYDPSTGIETLTAVPISKAAAVQRAGRAGRTKPGKCFRLYTQHAY- 381
Query: 934 NEMLP-SPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALN 992
E LP + +PEIQR+NL V+ FDF+ PP + ++ + L+ LGA++
Sbjct: 382 -EQLPDATIPEIQRSNLAPVIMQLKALGIDNIVRFDFLTSPPADLVIRAFELLYSLGAID 440
Query: 993 NVGALTD-LGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVP-SVFFRPKDRAE 1050
+ LT LG +M E +DP +AK+LL + GCL E+LTI +M+S+ +V+ + +
Sbjct: 441 DYAKLTKPLGMRMAELAVDPMMAKVLLSAQSFGCLSEILTIAAMVSLQGAVWVQHDGDKK 500
Query: 1051 ESDAAREKFFVQESDHLTLLYVYQQW-KEHQYRGDWCEEHYLHVKSLRKAREVRSQLLDI 1109
S+++R KF V+E DHLT L VYQ + + + WC ++ L+ +SL +A VR+QL
Sbjct: 501 SSESSRRKFAVEEGDHLTYLNVYQAFVTKGKKESKWCRDNLLNYRSLLRAVSVRAQLKRY 560
Query: 1110 LKTLKIPL--TSSGH----DF----DVVRKAICSAYFHNAARLKGVGEYINCRNGMPCHL 1159
L+ I + T H D + +++ + + YF +AAR++ G + GM H
Sbjct: 561 LERFGIQVDETFPSHYNKSDLSKPAEKIQRCLTTGYFAHAARMQPDGTFKTVSGGMTLHA 620
Query: 1160 HPSSAIYGLGYTPEYVVYHELILT-TKEYMQCATAVEPQWLSELGPMFFSVK 1210
HPSS ++ ++V++HE++ T K +++ T +E +L E P +++++
Sbjct: 621 HPSSLMFNR--KADWVIFHEIMQTGEKTFIRDITKIEKSYLLEYAPNYYNMQ 670
>CGD|CAL0002969 [details] [associations]
symbol:orf19.107 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0002969 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K14781 EMBL:AACQ01000106 RefSeq:XP_714316.1
GeneID:3644014 KEGG:cal:CaO19.107 Uniprot:Q59XP9
Length = 831
Score = 965 (344.8 bits), Expect = 5.1e-106, Sum P(2) = 5.1e-106
Identities = 212/576 (36%), Positives = 335/576 (58%)
Query: 542 TAVVGEQGEIDFREDAKFSQHMKKGEAVSDFAKSKTLAEQRQYLPIFSVRDELLQVIREN 601
T V +Q + D E+ + ++ A ++ L + R+ LPI+ +D++++ I N
Sbjct: 141 TVVYKDQDDEDDEEENNTFNFSQNSFQLA--ATAQQLLQIREKLPIYHHKDKIIEYINNN 198
Query: 602 QXXXXXGETGSGKTTQLTQYLLEDGYTTNGIVGCTQPRRVAAMSVAKRVSEEMDTELGDK 661
Q GETGSGK+TQ+ Q+L+ + ++G TQPRRVAA S+A RVSEE +LG
Sbjct: 199 QVTIVIGETGSGKSTQIPQFLMPENPK---MIGVTQPRRVAAASLAARVSEEYGCKLGQD 255
Query: 662 VGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLFGIL 721
VGY +RF ++T T +KY+TDG+LLRE + DS+L KY I++DEAHER++ TD++ G L
Sbjct: 256 VGYQVRFTNMTNRQTKLKYLTDGMLLREIMLDSNLTKYSTIILDEAHERTILTDLIMGFL 315
Query: 722 KKVVA--RRRDFKLIVTSATLNAQKFSDFFGSVPIFHIPGRTFPVNTLYSKTPCEDYVEA 779
K+++ +R+D K++V SATLNA+ FS+FFG+ PI +I G+ +PV+ Y ED V+
Sbjct: 316 KQIITSGKRKDLKIVVMSATLNAELFSNFFGNAPILYIEGKMYPVSQFYLDAESEDIVDT 375
Query: 780 AVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQ 839
++ + I++ P GD+L F+ GQ+EI+ C + +EQL RE P ++ LP+Y+
Sbjct: 376 MIRSIIQINLNEPEGDVLCFLPGQEEIDN-CV---KSLEQLAPQLPREAPLIVPLPLYAA 431
Query: 840 LPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQ 899
L Q+KIFEK +G RK I+ATNIAETS+TV G+ YVID+G K+KV+ +G+ L
Sbjct: 432 LSPGQQSKIFEKLPKGRRKVILATNIAETSITVSGVKYVIDSGLRKIKVWKHNLGLSTLL 491
Query: 900 VFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVP-EIQRTNLGNVVXXXXX 958
P+S +RLY ES Y+ LP EI+R ++ V
Sbjct: 492 TTPISQASARQRAGRAGRESEGKVFRLYPESTYM--ALPKQQESEIKRNDIILPVLTLKK 549
Query: 959 XXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLL 1018
+ +++ P Q+ IL+++ L+ LGALN+ G +T LG+KM PL P L+ +L+
Sbjct: 550 LGVDDLLNWSWLEYPGQDAILSALNTLYTLGALNDSGKVTTLGYKMSILPLPPQLSVVLI 609
Query: 1019 MGEQLGCLDEVLTIVSMLSVPSVFFRPKDRA-EESDAAREKFFVQESDHLTLLYVYQQWK 1077
+ G L V+ I S LSV ++ A +E + R + + H L+ +Y+ ++
Sbjct: 610 TAAEFGVLSPVIDIASCLSVDNLITNVTGEARDEINFKRRQHCPLGNIHGDLIALYEYFQ 669
Query: 1078 EHQYRG-DWCEEHYLHVKSLRKAREVRSQLLDILKT 1112
+Q +G +WC+E K + +++ QL + + T
Sbjct: 670 AYQAQGKEWCKELAFSFKGFKNVEKIKYQLQEYMMT 705
Score = 104 (41.7 bits), Expect = 5.1e-106, Sum P(2) = 5.1e-106
Identities = 31/110 (28%), Positives = 46/110 (41%)
Query: 1095 SLRKAREVRSQLLDILKTLKIPLTSSGHDFDVVRKAICSAYFHNAARLKGVGEYINCRNG 1154
SL A E QL + L T D + K+ Y N A + G
Sbjct: 712 SLTNA-EKNKQLAKLRAQLDNEETDKQLDVPSILKSFLKGYITNTAVGMPDRSFRTFNTG 770
Query: 1155 MPCHLHPSSAIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGP 1204
+HPSS ++G + ++Y E + TTK Y + +A+E WL E+ P
Sbjct: 771 QLISVHPSSTLFGKP-NMDAIMYIEYVFTTKGYARNVSAIELSWLQEIAP 819
Score = 46 (21.3 bits), Expect = 6.7e-100, Sum P(2) = 6.7e-100
Identities = 19/71 (26%), Positives = 31/71 (43%)
Query: 1178 HELILTTKEYMQCATAVEPQWLSELGPMFFSVKDSDT---SMLEHKK---KQKESKTAME 1231
H ++ EY Q A +W EL F K+ + + E+ KQ +S T E
Sbjct: 658 HGDLIALYEYFQAYQAQGKEWCKELAFSFKGFKNVEKIKYQLQEYMMTTIKQDDSLTNAE 717
Query: 1232 EEMENLRKIQA 1242
+ + L K++A
Sbjct: 718 KNKQ-LAKLRA 727
>ZFIN|ZDB-GENE-080507-1 [details] [associations]
symbol:dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide
40" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-080507-1 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104421
EMBL:CR848791 EMBL:CU861501 IPI:IPI00507978
Ensembl:ENSDART00000101707 Uniprot:E7F7R7
Length = 734
Score = 1029 (367.3 bits), Expect = 6.7e-104, P = 6.7e-104
Identities = 215/499 (43%), Positives = 304/499 (60%)
Query: 575 SKTLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNGIVG 634
S+T + + LPI+ +D+L+Q + EN GETGSGKTTQL QYL + G + NG +G
Sbjct: 8 SETEHHESKKLPIYQYKDKLVQAVEENTFLIVTGETGSGKTTQLPQYLYKAGLSRNGRIG 67
Query: 635 CTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDS 694
TQPRRVAA++VA+RVS EM LG++VGY +RF+D + T+IKYMTDG LLRE L D
Sbjct: 68 VTQPRRVAAITVAQRVSSEMQVRLGEEVGYQVRFDDCSTKDTMIKYMTDGCLLREILADP 127
Query: 695 DLDKYRVIVMDEAHERSLSTDVLFGILKKVVAR-----RRDFKLIVTSATLNAQKFSDFF 749
L +Y ++++DEAHERSL+TDVL G+LKK + + + K++V SATL +K S F+
Sbjct: 128 SLTQYSIVILDEAHERSLNTDVLLGLLKKTLLKGSRGNKTPLKVVVMSATLETEKLSSFY 187
Query: 750 GSVPIFHIPGRTFPVNTLYSKT--PCED----YVEAAVKQAMTIHITSPPGDILIFMTGQ 803
G+ P+F IPGRT+PV + P + YV+ VK + +H GDIL+F+TGQ
Sbjct: 188 GNCPVFTIPGRTYPVKETFCNLIGPKDKESSVYVKEVVKMTLDVHTNEAAGDILVFLTGQ 247
Query: 804 DEIEAACFALKERMEQL---ISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCI 860
EIE AC L E+ E L R V LLIL +Y +P D Q +IF+ A +G RKC+
Sbjct: 248 SEIEKACDLLFEKAEILDYRYDVHDRSVDGLLILSLYGSMPTDQQRQIFQPAPKGVRKCV 307
Query: 861 VATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXX 920
VATNIA TSLT+DGI Y++D+G+ K +N ++G+D L+V P+S
Sbjct: 308 VATNIAATSLTIDGIRYIVDSGFVKQLNHNSRVGLDILEVVPISKSEAQQRAGRAGRTAA 367
Query: 921 XXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILN 980
C+R+Y++ + M +PEIQRT+L +V+ F ++D P + IL
Sbjct: 368 GKCFRIYSKDFWDTCMPEYTIPEIQRTSLTSVILTLKCLGVHDVIRFPYLDCPEERFILT 427
Query: 981 SMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPS 1040
++ QL+ A++ G +T LG MVEFPL P L + LL LGC D +L + +MLSV +
Sbjct: 428 ALKQLYQYDAIDRRGEVTKLGRLMVEFPLPPNLTRALLKAAALGCEDIMLPVAAMLSVEN 487
Query: 1041 VFFRPKDRAEESDA-AREK 1058
+F RP ++ +A R K
Sbjct: 488 IFIRPGKPEKQKEAEVRHK 506
Score = 701 (251.8 bits), Expect = 2.8e-68, P = 2.8e-68
Identities = 157/483 (32%), Positives = 260/483 (53%)
Query: 776 YVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQL---ISSTTREVPELL 832
YV+ VK + +H GDIL+F+TGQ EIE AC L E+ E L R V LL
Sbjct: 220 YVKEVVKMTLDVHTNEAAGDILVFLTGQSEIEKACDLLFEKAEILDYRYDVHDRSVDGLL 279
Query: 833 ILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPK 892
IL +Y +P D Q +IF+ A +G RKC+VATNIA TSLT+DGI Y++D+G+ K +N +
Sbjct: 280 ILSLYGSMPTDQQRQIFQPAPKGVRKCVVATNIAATSLTIDGIRYIVDSGFVKQLNHNSR 339
Query: 893 MGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNV 952
+G+D L+V P+S C+R+Y++ + M +PEIQRT+L +V
Sbjct: 340 VGLDILEVVPISKSEAQQRAGRAGRTAAGKCFRIYSKDFWDTCMPEYTIPEIQRTSLTSV 399
Query: 953 VXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPP 1012
+ F ++D P + IL ++ QL+ A++ G +T LG MVEFPL P
Sbjct: 400 ILTLKCLGVHDVIRFPYLDCPEERFILTALKQLYQYDAIDRRGEVTKLGRLMVEFPLPPN 459
Query: 1013 LAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDA-AREKFFVQ----ESDHL 1067
L + LL LGC D +L + +MLSV ++F RP ++ +A R K +D L
Sbjct: 460 LTRALLKAAALGCEDIMLPVAAMLSVENIFIRPGKPEKQKEAEVRHKEIAACSGGSNDFL 519
Query: 1068 TLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQLLDILKTLK----IPLTS-SGH 1122
LL V+++ + + WC+E+++H ++++ A V +QL +IL LK P G
Sbjct: 520 MLLCVFEKCRASENPSAWCKENWIHWRAVKSAFSVETQLREILLRLKQQKDFPHERFEGS 579
Query: 1123 DFDVVRKAICSAYFHNAARLKGVGEYINCR---NGMPCHLHPSSAIYGLGYTPEYVVYHE 1179
+++R+ +C YF N AR + +G+ C +G +HPSS ++G +++++H+
Sbjct: 580 RSELLRQCLCLGYFTNVAR-RSIGKSF-CTMDGHGSSVLIHPSSCLFGQELQLDWIIFHD 637
Query: 1180 LILTTKEYMQCATAVEPQWLSELGPMFFSVKDSDTSMLEHKKKQKESKTAMEEEMENLRK 1239
+++T++ Y++ + W+ +L P + + S + ++ E E++ R+
Sbjct: 638 VLVTSRVYVRTVCPIRYDWVKDLLPKLHEIDVYELSSVAREEVTDEEMVQWEKKEAAKRQ 697
Query: 1240 IQA 1242
+A
Sbjct: 698 AEA 700
>POMBASE|SPAC20H4.09 [details] [associations]
symbol:SPAC20H4.09 "ATP-dependent RNA helicase,
spliceosomal (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IC;ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005829 "cytosol" evidence=IDA] [GO:0045292 "mRNA cis splicing,
via spliceosome" evidence=ISS] [GO:0071276 "cellular response to
cadmium ion" evidence=IMP] [GO:0071585 "detoxification of cadmium
ion" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPAC20H4.09
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 EMBL:CU329670
GO:GO:0008380 GO:GO:0071276 GO:GO:0071585 GO:GO:0006397
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 RefSeq:NP_593629.1 ProteinModelPortal:Q9HE06
EnsemblFungi:SPAC20H4.09.1 GeneID:2542874 KEGG:spo:SPAC20H4.09
OMA:NYSVIIL OrthoDB:EOG4BGD47 NextBio:20803914 Uniprot:Q9HE06
Length = 647
Score = 1013 (361.7 bits), Expect = 3.3e-102, P = 3.3e-102
Identities = 223/630 (35%), Positives = 360/630 (57%)
Query: 581 QRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTT-NGIVGCTQPR 639
Q++ LPI R++LL + +NQ G TG GKTTQ+ Q+L E G+ + NGI+GCTQPR
Sbjct: 21 QKKLLPITKYRNQLLYAVEQNQITIVLGHTGCGKTTQIPQFLYEAGWASQNGIIGCTQPR 80
Query: 640 RVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDSDLDKY 699
R+ A SV++RVS E+++ G GY+I+F+ T IKYMTDG+LL E D L++Y
Sbjct: 81 RLVAKSVSERVSLELNSPPGSLCGYSIQFDHNVSEKTKIKYMTDGILLNEIFFDPLLERY 140
Query: 700 RVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGS--VPIFHI 757
++++DE HER+LSTD+L G+LK+++ +R DF+L+++SA+++A K S FFG V I
Sbjct: 141 SIVILDEVHERTLSTDLLLGVLKRILEKRNDFRLVLSSASVDANKLSQFFGQDKVCTMSI 200
Query: 758 PGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERM 817
G+ FPV TL+ + P E+YV++A++ + I+ T PPGDIL+F++G+ EIE + +K+
Sbjct: 201 EGKLFPVETLFLQKPTENYVDSAIETVININSTYPPGDILVFLSGRKEIE---YCIKKIE 257
Query: 818 EQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFY 877
+ LI ++ + L+ LP+++ L D Q ++F RK I +TNIAETS+T+DGI Y
Sbjct: 258 DSLIHAS-EDCQTLVPLPLHAGLTVDEQMRVFNIYDGDFRKVIFSTNIAETSITIDGIVY 316
Query: 878 VIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEML 937
V+D+G+ K ++YNP L P+S +RLYTE AY + M
Sbjct: 317 VVDSGFNKQRIYNPYTRTSKLINVPISKSSAIQRSGRAGRTMRGKVFRLYTEKAY-SLMK 375
Query: 938 PSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNVGAL 997
+I ++ +V F F PP +++ ++ L++LG L+ G L
Sbjct: 376 EEFEADILNCDMSPLVLFLKGLGLKNILQFPFFVRPPTVHLMAALEDLYLLGVLDESGNL 435
Query: 998 TD-LGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDA-- 1054
TD LG ++ LD ++K LL Q GC E+L+I S+L+ VF+ P + ++DA
Sbjct: 436 TDPLGIQISNSFLDANISKALLTSNQFGCTHEILSIASILTAGEVFYNPTS-SSKNDAFV 494
Query: 1055 AREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQLLDILKTLK 1114
A FF E D +T L V++ + ++ WC ++YL+ ++LR+A ++R+ L+ L
Sbjct: 495 AHSSFFANEGDIITALNVFESFVGNKKDLQWCRKNYLNYQTLRQALDIRTHLVRFLNKFS 554
Query: 1115 IPLTSS--GHDFDVVRKAICSAYFHNAARLKGVGEYINCRNGMPCHLHPSSAIYGLGYTP 1172
IP D + K + + N A L+ G Y G L SS ++ TP
Sbjct: 555 IPTAQRLPSSDCSKILKCLLDGFVRNVAHLQNDGSYKTI-GGKQVWLDSSSVLHEKK-TP 612
Query: 1173 EYVVYHELILT-TKEYMQCATAVEPQWLSE 1201
+++Y + + T+ +++ + +E WL +
Sbjct: 613 -WIMYSSAVESETQIFVKNISKIESFWLDK 641
>ASPGD|ASPL0000001852 [details] [associations]
symbol:AN6085 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005730
"nucleolus" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:BN001301 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:PGQEEID EnsemblFungi:CADANIAT00006930
Uniprot:C8V2M2
Length = 824
Score = 664 (238.8 bits), Expect = 3.8e-102, Sum P(3) = 3.8e-102
Identities = 152/467 (32%), Positives = 242/467 (51%)
Query: 752 VPIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSP-PGDILIFMTGQDEIEAAC 810
+ + HI GR FPV T+YS P D+V+AA+K IH P PGDIL+F+TGQ+ +EA
Sbjct: 360 IAVCHIKGRQFPVKTIYSPEPVHDFVDAALKVIFQIHYKEPIPGDILVFLTGQETVEA-- 417
Query: 811 FALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSL 870
L+ + + + +P++ +LP+++ LP Q ++F A TRK I+ATNIAETS+
Sbjct: 418 --LENLVNEYATGMDPSLPKIQVLPLFAALPQAAQQRVFVPAPPRTRKIILATNIAETSV 475
Query: 871 TVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTES 930
TV G+ YV+D G K+K + ++G+D+L V P+S CYRLYTE
Sbjct: 476 TVSGVRYVVDCGKAKIKQFRTRLGLDSLLVKPISKSAAIQRKGRAGREAPGQCYRLYTEK 535
Query: 931 AYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGA 990
YL + PEI R +L + F F+ PP+E + ++ QL + A
Sbjct: 536 DYL-ALDEVNTPEILRCDLSQAILNMKARGVDNVIEFPFLTRPPREALEKALLQLLSIEA 594
Query: 991 LNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLG--CLDEVLTIVSMLSVPSVFFRP--K 1046
L+ G +++ G + + PL P L ++LL G CL +V+ I+S LSV ++F +
Sbjct: 595 LDETGKISETGSHIAKLPLTPTLGRVLLAASDFGPDCLTDVIDIISCLSVENIFLNTTSE 654
Query: 1047 DRAEESDAAREKFFVQESDHLTLLYVYQQW-KEHQYRGDWCEEHYLHVKSLRKAREVRSQ 1105
++ E ++AAR + +E DHLT+L + + E+ R W E H + ++++ +VR Q
Sbjct: 655 EKKEAAEAARRDLYRREGDHLTMLATVRAYASENTDRKAWAERHLVSHRAMQSVMDVRKQ 714
Query: 1106 LLDILKTLKI---PLTSSGHDFDVVR--------KAICSAYFHNAARLKGVGEYINCRNG 1154
L + K+ P S D +R K+ + N ARL G Y
Sbjct: 715 LTAQCRQAKLLPSPTESRDSDSSSIREPSPVFILKSFLRGFATNTARLVPDGSYRTVVGN 774
Query: 1155 MPCHLHPSSAIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSE 1201
+HPSS ++G E ++Y+E + T + Y + +AV+ W+ E
Sbjct: 775 QTVAIHPSSVLFGKKV--EAILYNEFVFTNRSYARGVSAVQMDWVGE 819
Score = 282 (104.3 bits), Expect = 3.8e-102, Sum P(3) = 3.8e-102
Identities = 63/146 (43%), Positives = 93/146 (63%)
Query: 619 TQYLLEDGYTTNGIVG-C---TQPRRVAAMSVAKRVSEEMDTELGD-----KVGYAIRFE 669
T + E+G +VG C TQPRRVAA+S+A+RV+EEM T LG KVGY++RF+
Sbjct: 195 TTIVQENGSKKEAVVGGCIAITQPRRVAAISLARRVAEEMGTPLGSSSPASKVGYSVRFD 254
Query: 670 DVTGPSTLIKYMTDGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRR 729
PST +K++T+G+LL+E L D L KY IV+DE HER ++ D++ G L+ +V+ +R
Sbjct: 255 TSVSPSTRVKFLTEGMLLQEMLHDPWLTKYSAIVVDEVHERGVNVDLVMGFLRNLVSGKR 314
Query: 730 D------FKLIVTSATLNAQKFSDFF 749
+ K +V SAT + + +FF
Sbjct: 315 EGRGGVPLKAVVMSATADMESLQEFF 340
Score = 127 (49.8 bits), Expect = 3.8e-102, Sum P(3) = 3.8e-102
Identities = 43/139 (30%), Positives = 66/139 (47%)
Query: 495 RKGSALVREIREKQTQNKSRQRFWELAGSQMGNIL---GVKKTAEQVDADTAVVGEQGEI 551
RK L E R +T+ + A Q N V + E A + + +Q E
Sbjct: 52 RKRDQLADETRLHRTKKSNTSESQAAAVEQNENRKEDEAVNNSGEATIAKS-LPKDQPEN 110
Query: 552 DFREDAKFSQHMK---KGEAVSDFAKSKTLAEQRQYLPIFSVRDELLQVIRENQXXXXXG 608
+ K S+ K G S K++ L E R+ LPIF+ DE+ Q +R+N G
Sbjct: 111 QKHKRKKHSRPFKDEENGRTASLKKKAQMLYEIRKNLPIFAHGDEIRQHLRKNDVMLLIG 170
Query: 609 ETGSGKTTQLTQYLLEDGY 627
ETGSGK+TQ+ Q+L+++ +
Sbjct: 171 ETGSGKSTQIPQFLVDESW 189
Score = 43 (20.2 bits), Expect = 6.0e-66, Sum P(2) = 6.0e-66
Identities = 14/45 (31%), Positives = 19/45 (42%)
Query: 76 AASIDEEEKSESSGIDEVVSNATNGKRSHASRRYRETSARDITDA 120
A + +EEKSE GI V + G++ Y D DA
Sbjct: 346 ARELQKEEKSEKDGI--AVCHI-KGRQFPVKTIYSPEPVHDFVDA 387
Score = 37 (18.1 bits), Expect = 1.1e-92, Sum P(3) = 1.1e-92
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 538 VDADTAVVGEQGEIDFREDAKFSQHMKKGEAVSD 571
VD D A + EQG+ + + K S + GE SD
Sbjct: 10 VDEDAAPIVEQGK-PLKSNKKPSP--ETGERPSD 40
>RGD|1359618 [details] [associations]
symbol:Dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide 40"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1359618 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104421 CTD:79665 OMA:LYGSMPT
OrthoDB:EOG48PMJH EMBL:BC083821 IPI:IPI00369962
RefSeq:NP_001005873.1 UniGene:Rn.29182 ProteinModelPortal:Q5XI69
PhosphoSite:Q5XI69 Ensembl:ENSRNOT00000006926 GeneID:287595
KEGG:rno:287595 InParanoid:Q5XI69 NextBio:626568
ArrayExpress:Q5XI69 Genevestigator:Q5XI69
GermOnline:ENSRNOG00000004549 Uniprot:Q5XI69
Length = 779
Score = 986 (352.1 bits), Expect = 2.4e-99, P = 2.4e-99
Identities = 210/489 (42%), Positives = 298/489 (60%)
Query: 586 PIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNGIVGCTQPRRVAAMS 645
PI R +L+Q +R+N G TGSGKTTQL +YL E G++ +G++G TQPR+VAA+S
Sbjct: 54 PIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAAIS 113
Query: 646 VAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDSDLDKYRVIVMD 705
VA+RV+EEM LG KVGY +RF+D + T IKYMTDG LL+ L D +L+K+ VI++D
Sbjct: 114 VAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLNKFSVIILD 173
Query: 706 EAHERSLSTDVLFGILKKVVA-----RRRDFKLIVTSATLNAQKFSDFFGSVPIFHIPGR 760
EAHER+L+TD+LFG+LKK+ R+ K++V SAT+ K S FFG+ PIF IPGR
Sbjct: 174 EAHERTLTTDILFGLLKKLFQDKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGR 233
Query: 761 TFPVN----TLYSKTPCED--YVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALK 814
+PV L E+ Y++A VK M IH+ GDIL+F+TGQ EIE +C L
Sbjct: 234 LYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLF 293
Query: 815 ERMEQL-----ISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETS 869
+ E + + TT + LLILP Y + D Q +IF G RKC+++TNI+ TS
Sbjct: 294 QMAESVDYDYDVQDTTLD--GLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATS 351
Query: 870 LTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTE 929
LT+DGI YV+D G+ K +NP++G+D L+V P+S C+R+Y++
Sbjct: 352 LTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTASGKCFRIYSK 411
Query: 930 SAYLNEMLPSPV-PEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVL 988
+ N+ +P V PEI+RT+L +VV F ++DPP + IL ++ QL+
Sbjct: 412 D-FWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNERLILEALKQLYQC 470
Query: 989 GALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDR 1048
A++ G +T LG MVEFPL P L ++ L C D +L I +MLSV +VF RP D
Sbjct: 471 DAIDRSGHVTRLGLSMVEFPLPPHLTCAVIRAASLDCEDLLLPIAAMLSVENVFIRPVDP 530
Query: 1049 AEESDAARE 1057
+ +A ++
Sbjct: 531 EYQKEAEQK 539
Score = 727 (261.0 bits), Expect = 4.3e-71, P = 4.3e-71
Identities = 162/485 (33%), Positives = 265/485 (54%)
Query: 776 YVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQL-----ISSTTREVPE 830
Y++A VK M IH+ GDIL+F+TGQ EIE +C L + E + + TT +
Sbjct: 255 YIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLD--G 312
Query: 831 LLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYN 890
LLILP Y + D Q +IF G RKC+++TNI+ TSLT+DGI YV+D G+ K +N
Sbjct: 313 LLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHN 372
Query: 891 PKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPV-PEIQRTNL 949
P++G+D L+V P+S C+R+Y++ + N+ +P V PEI+RT+L
Sbjct: 373 PRLGLDILEVVPISKSEALQRSGRAGRTASGKCFRIYSKD-FWNQCMPDHVIPEIKRTSL 431
Query: 950 GNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPL 1009
+VV F ++DPP + IL ++ QL+ A++ G +T LG MVEFPL
Sbjct: 432 TSVVLTLKCLAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPL 491
Query: 1010 DPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAAREKFFVQE-----S 1064
P L ++ L C D +L I +MLSV +VF RP D + +A ++ + +
Sbjct: 492 PPHLTCAVIRAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQKHRELAAKAGGFN 551
Query: 1065 DHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQLLDILKTLK----IPL-TS 1119
D TL +++Q K WC++H++H + L A V +QL ++++ LK P T
Sbjct: 552 DFATLAVIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDFPRETF 611
Query: 1120 SGHDFDVVRKAICSAYFHNAARLKGVGEYINCR---NGMPCHLHPSSAIYGLGYTPEYVV 1176
G +V+R+ +C+ YF N AR + VG C G P H+HPSSA++ E+++
Sbjct: 612 EGPKHEVLRRCLCAGYFKNVAR-RSVGRTF-CTMDGRGSPVHIHPSSALHEQETKLEWII 669
Query: 1177 YHELILTTKEYMQCATAVEPQWLSELGPMFFSVKDSDTSMLEHKKKQKESKTAMEEEMEN 1236
+HE+++TTK Y + + +W+ +L P + D S + ++ + +++ + EN
Sbjct: 670 FHEVLVTTKVYARIVCPIRYEWVRDLLPKLHELNAHDLSSVARREMRDDARRKWTNK-EN 728
Query: 1237 LRKIQ 1241
+++++
Sbjct: 729 VKQLK 733
>SGD|S000001561 [details] [associations]
symbol:DHR2 "Predominantly nucleolar DEAH-box ATP-dependent
RNA helicase" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0003724 "RNA helicase activity"
evidence=IDA] [GO:0042254 "ribosome biogenesis" evidence=IDA;TAS]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000001561 GO:GO:0005524 GO:GO:0005730
EMBL:BK006944 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GO:GO:0003724 GO:GO:0000462 EMBL:AF005090 EMBL:L15328 EMBL:X75560
EMBL:Z28078 PIR:S37903 RefSeq:NP_012845.1 ProteinModelPortal:P36009
SMR:P36009 DIP:DIP-6424N IntAct:P36009 MINT:MINT-677951
STRING:P36009 PaxDb:P36009 PeptideAtlas:P36009 EnsemblFungi:YKL078W
GeneID:853784 KEGG:sce:YKL078W CYGD:YKL078w KO:K14781 OMA:PGQEEID
OrthoDB:EOG4F7RTB NextBio:974906 Genevestigator:P36009
GermOnline:YKL078W Uniprot:P36009
Length = 735
Score = 885 (316.6 bits), Expect = 3.7e-99, Sum P(2) = 3.7e-99
Identities = 200/559 (35%), Positives = 317/559 (56%)
Query: 573 AKSKTLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTT--N 630
+++ L + R+ LP++ + E++ I N GETGSGK+TQ+ Q++LE Y T +
Sbjct: 69 SRASDLLKMRETLPVYQHKREIMSYIESNPVTVLIGETGSGKSTQIPQFVLEKLYDTKKH 128
Query: 631 GIVGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRET 690
G + TQPRRVAA+++A RV++E +LG++VGY++RF++ T T +KY+TDG+LLRE
Sbjct: 129 GSIAVTQPRRVAAINLATRVAQEHGCKLGEQVGYSVRFDNTTTTRTRLKYLTDGMLLREL 188
Query: 691 LKDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVV-ARRRDFKLIVTSATLNAQKFSDFF 749
+ +SDL +Y VIV+DEAHER++ TD++ G LK ++ R D ++IV SATL A+KFS+FF
Sbjct: 189 MMNSDLREYSVIVIDEAHERTVLTDLILGFLKSLIQGPRPDLRIIVMSATLQAEKFSEFF 248
Query: 750 GSVPIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAA 809
+ PI + GR F V Y K P +D V+A ++ + I+ GDIL F+ GQ+EI+ A
Sbjct: 249 NNAPILFVEGRKFDVKQYYLKAPTDDIVDAVIRCCIQINQGEELGDILCFLPGQEEIDKA 308
Query: 810 CFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETS 869
+ E++ + +S VP ++ P+Y+ LPA Q+ +F K RK + +TNIAETS
Sbjct: 309 V-TIMEKIAKYVSDEA-PVPLIVPYPLYAALPAVQQSLVFAPIKGFKRKVVFSTNIAETS 366
Query: 870 LTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTE 929
+T+ G+ +V+D+G K+KV+ ++G+ L P+S +RLY E
Sbjct: 367 VTISGVKFVVDSGLRKVKVWRHQLGLATLLTVPISQASAMQRSGRAGRESEGKSFRLYCE 426
Query: 930 SAYLNEMLPSPV-PEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVL 988
S Y+ LP PEI R+++ + V + + + P +E I+ + +L+ L
Sbjct: 427 SDYVK--LPKQSEPEIARSDVTSPVLMLKRYGVDDLLNWTWFENPGKEAIVMGLQELYEL 484
Query: 989 GALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDR 1048
GAL+ G +T G +M PL P L+ +L+ ++GCL +V+ IVS LSV ++ P
Sbjct: 485 GALDTRGKITKRGQQMALLPLQPHLSSVLIKASEVGCLSQVIDIVSCLSVENLLLNPSP- 543
Query: 1049 AEESDAAREKFFV------QESDHLTL-----LYVYQQWKEHQY---RGDWCEEHYLHVK 1094
EE D E+ + D + L +Y Y+ K R DWC+ + ++
Sbjct: 544 -EERDEVNERRLSLCNAGKRYGDLIMLKELFDIYFYELGKSQDASSERNDWCKGLCISIR 602
Query: 1095 SLRKAREVRSQLLDILKTL 1113
+ VR QL K L
Sbjct: 603 GFKNVIRVRDQLRVYCKRL 621
Score = 119 (46.9 bits), Expect = 3.7e-99, Sum P(2) = 3.7e-99
Identities = 37/146 (25%), Positives = 62/146 (42%)
Query: 1070 LYVYQQWKEHQY---RGDWCEEHYLHVKSLRKAREVRSQLLDILKTLKIPLTSS------ 1120
+Y Y+ K R DWC+ + ++ + VR QL K L ++
Sbjct: 575 IYFYELGKSQDASSERNDWCKGLCISIRGFKNVIRVRDQLRVYCKRLFSSISEEDEESKK 634
Query: 1121 -GHDFDVVRKAI-C--SAYFHNAARLKGVGEYINCRNGMPCHLHPSSAIYGLGYTPEYVV 1176
G D +++ K + C + + N A Y G P +HPSS ++ P ++
Sbjct: 635 IGEDGELISKILKCFLTGFIKNTAIGMPDRSYRTVSTGEPISIHPSSMLFMNKSCPG-IM 693
Query: 1177 YHELILTTKEYMQCATAVEPQWLSEL 1202
Y E + TTK Y + + +E WL E+
Sbjct: 694 YTEYVFTTKGYARNVSRIELSWLQEV 719
>UNIPROTKB|J9NVQ3 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:AAEX03006584
EMBL:AAEX03006585 Ensembl:ENSCAFT00000048714 Uniprot:J9NVQ3
Length = 857
Score = 983 (351.1 bits), Expect = 5.0e-99, P = 5.0e-99
Identities = 210/486 (43%), Positives = 295/486 (60%)
Query: 586 PIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNGIVGCTQPRRVAAMS 645
PI R +L+Q +R+N G TGSGKTTQL +YL E G++ +G++G TQPR+VAA+S
Sbjct: 132 PIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAAIS 191
Query: 646 VAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDSDLDKYRVIVMD 705
VA+RV+EEM LG KVGY +RF+D + T IKYMTDG LL+ L D +L K+ VI++D
Sbjct: 192 VAQRVAEEMKCALGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVIILD 251
Query: 706 EAHERSLSTDVLFGILKKVVA-----RRRDFKLIVTSATLNAQKFSDFFGSVPIFHIPGR 760
EAHER+L+TD+LFG+LKK+ R+ K++V SAT+ K S FFG+ PIF IPGR
Sbjct: 252 EAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGR 311
Query: 761 TFPVN----TLYSKTPCED--YVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALK 814
+PV L E+ Y++A VK M IH+ GDIL+F+TGQ EIE +C L
Sbjct: 312 LYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLF 371
Query: 815 ERMEQL-----ISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETS 869
+ E + + TT + LLILP Y + D Q +IF G RKC+++TNI+ TS
Sbjct: 372 QMAESVDYDYDVQDTTLD--GLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATS 429
Query: 870 LTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTE 929
LT+DGI YV+D G+ K +NP++G+D L+V P+S C+R+Y++
Sbjct: 430 LTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTSSGKCFRIYSK 489
Query: 930 SAYLNEMLPSPV-PEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVL 988
+ N+ +P V PEI+RT+L +VV F ++DPP + IL ++ QL+
Sbjct: 490 D-FWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNERLILEALKQLYQC 548
Query: 989 GALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDR 1048
A++ G +T LG MVEFPL P L ++ L C D +L I +MLSV +VF RP D
Sbjct: 549 DAIDRSGHVTRLGLSMVEFPLPPHLTCAVIKAASLDCEDLLLPIAAMLSVENVFIRPVDP 608
Query: 1049 AEESDA 1054
+ +A
Sbjct: 609 EYQKEA 614
Score = 727 (261.0 bits), Expect = 4.3e-71, P = 4.3e-71
Identities = 163/485 (33%), Positives = 264/485 (54%)
Query: 776 YVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQL-----ISSTTREVPE 830
Y++A VK M IH+ GDIL+F+TGQ EIE +C L + E + + TT +
Sbjct: 333 YIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLD--G 390
Query: 831 LLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYN 890
LLILP Y + D Q +IF G RKC+++TNI+ TSLT+DGI YV+D G+ K +N
Sbjct: 391 LLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHN 450
Query: 891 PKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPV-PEIQRTNL 949
P++G+D L+V P+S C+R+Y++ + N+ +P V PEI+RT+L
Sbjct: 451 PRLGLDILEVVPISKSEALQRSGRAGRTSSGKCFRIYSKD-FWNQCMPDHVIPEIKRTSL 509
Query: 950 GNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPL 1009
+VV F ++DPP + IL ++ QL+ A++ G +T LG MVEFPL
Sbjct: 510 TSVVLTLKCLAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPL 569
Query: 1010 DPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAA-REKFFVQES---- 1064
P L ++ L C D +L I +MLSV +VF RP D + +A R + ++
Sbjct: 570 PPHLTCAVIKAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAAKAGGFN 629
Query: 1065 DHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQLLDILKTLK----IPL-TS 1119
D TL +++Q K WC++H++H + L A V +QL ++++ LK P T
Sbjct: 630 DFATLAVIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDFPRETF 689
Query: 1120 SGHDFDVVRKAICSAYFHNAARLKGVGEYINCR---NGMPCHLHPSSAIYGLGYTPEYVV 1176
G +V+R+ +C+ YF N AR + VG C G P H+HPSSA++ E+++
Sbjct: 690 EGPKHEVLRRCLCAGYFKNVAR-RSVGRTF-CTMDGRGSPVHIHPSSALHEQETKLEWII 747
Query: 1177 YHELILTTKEYMQCATAVEPQWLSELGPMFFSVKDSDTSMLEHKKKQKESKTAMEEEMEN 1236
+HE+++TTK Y + + +W+ +L P D S + ++ +++++ + EN
Sbjct: 748 FHEVLVTTKVYARIVCPIRYEWVRDLLPKLHEFNAHDLSSVARREVREDARRRWTNK-EN 806
Query: 1237 LRKIQ 1241
++ ++
Sbjct: 807 VKHLK 811
>UNIPROTKB|F1S235 [details] [associations]
symbol:LOC100519272 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:CU694896
RefSeq:XP_003131712.1 Ensembl:ENSSSCT00000019229 GeneID:100519272
KEGG:ssc:100519272 Uniprot:F1S235
Length = 779
Score = 983 (351.1 bits), Expect = 5.0e-99, P = 5.0e-99
Identities = 210/486 (43%), Positives = 295/486 (60%)
Query: 586 PIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNGIVGCTQPRRVAAMS 645
PI R +L+Q +R+N G TGSGKTTQL +YL E G++ +G++G TQPR+VAA+S
Sbjct: 54 PIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAAIS 113
Query: 646 VAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDSDLDKYRVIVMD 705
VA+RV+EEM LG KVGY +RF+D + T IKYMTDG LL+ L D +L K+ VI++D
Sbjct: 114 VAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVIILD 173
Query: 706 EAHERSLSTDVLFGILKKVVA-----RRRDFKLIVTSATLNAQKFSDFFGSVPIFHIPGR 760
EAHER+L+TD+LFG+LKK+ R+ K++V SAT+ K S FFG+ PIF IPGR
Sbjct: 174 EAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGR 233
Query: 761 TFPVN----TLYSKTPCED--YVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALK 814
+PV L E+ Y++A VK M IH+ GDIL+F+TGQ EIE +C L
Sbjct: 234 LYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLF 293
Query: 815 ERMEQL-----ISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETS 869
+ E + + TT + LLILP Y + D Q +IF G RKC+++TNI+ TS
Sbjct: 294 QMAESVDYDYDVQDTTLD--GLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATS 351
Query: 870 LTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTE 929
LT+DGI YV+D G+ K +NP++G+D L+V P+S C+R+Y++
Sbjct: 352 LTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTSSGKCFRIYSK 411
Query: 930 SAYLNEMLPSPV-PEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVL 988
+ N+ +P V PEI+RT+L +VV F ++DPP + IL ++ QL+
Sbjct: 412 D-FWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNERLILEALKQLYQC 470
Query: 989 GALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDR 1048
A++ G +T LG MVEFPL P L ++ L C D +L I +MLSV +VF RP D
Sbjct: 471 DAIDRSGHVTRLGLSMVEFPLPPHLTCAVIKAASLDCEDLLLPIAAMLSVENVFIRPVDP 530
Query: 1049 AEESDA 1054
+ +A
Sbjct: 531 EYQKEA 536
Score = 727 (261.0 bits), Expect = 4.3e-71, P = 4.3e-71
Identities = 163/485 (33%), Positives = 264/485 (54%)
Query: 776 YVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQL-----ISSTTREVPE 830
Y++A VK M IH+ GDIL+F+TGQ EIE +C L + E + + TT +
Sbjct: 255 YIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLD--G 312
Query: 831 LLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYN 890
LLILP Y + D Q +IF G RKC+++TNI+ TSLT+DGI YV+D G+ K +N
Sbjct: 313 LLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHN 372
Query: 891 PKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPV-PEIQRTNL 949
P++G+D L+V P+S C+R+Y++ + N+ +P V PEI+RT+L
Sbjct: 373 PRLGLDILEVVPISKSEALQRSGRAGRTSSGKCFRIYSKD-FWNQCMPDHVIPEIKRTSL 431
Query: 950 GNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPL 1009
+VV F ++DPP + IL ++ QL+ A++ G +T LG MVEFPL
Sbjct: 432 TSVVLTLKCLAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPL 491
Query: 1010 DPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAA-REKFFVQES---- 1064
P L ++ L C D +L I +MLSV +VF RP D + +A R + ++
Sbjct: 492 PPHLTCAVIKAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAAKAGGFN 551
Query: 1065 DHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQLLDILKTLK----IPL-TS 1119
D TL +++Q K WC++H++H + L A V +QL ++++ LK P T
Sbjct: 552 DFATLAVIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDFPRETF 611
Query: 1120 SGHDFDVVRKAICSAYFHNAARLKGVGEYINCR---NGMPCHLHPSSAIYGLGYTPEYVV 1176
G +V+R+ +C+ YF N AR + VG C G P H+HPSSA++ E+++
Sbjct: 612 EGPKHEVLRRCLCAGYFKNVAR-RSVGRTF-CTMDGRGSPVHIHPSSALHEQETKLEWII 669
Query: 1177 YHELILTTKEYMQCATAVEPQWLSELGPMFFSVKDSDTSMLEHKKKQKESKTAMEEEMEN 1236
+HE+++TTK Y + + +W+ +L P D S + ++ +++++ + EN
Sbjct: 670 FHEVLVTTKVYARIVCPIRYEWVRDLLPKLHEFNAHDLSSVARREVREDARRRWTNK-EN 728
Query: 1237 LRKIQ 1241
++ ++
Sbjct: 729 VKHLK 733
>UNIPROTKB|Q08DS9 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
HOVERGEN:HBG039428 GeneTree:ENSGT00700000104421 CTD:79665
OMA:LYGSMPT EMBL:DAAA02048338 EMBL:BC123581 IPI:IPI00715479
RefSeq:NP_001070365.1 UniGene:Bt.63706 Ensembl:ENSBTAT00000023753
GeneID:533484 KEGG:bta:533484 InParanoid:Q08DS9 NextBio:20876051
Uniprot:Q08DS9
Length = 779
Score = 983 (351.1 bits), Expect = 5.0e-99, P = 5.0e-99
Identities = 210/486 (43%), Positives = 295/486 (60%)
Query: 586 PIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNGIVGCTQPRRVAAMS 645
PI R +L+Q +R+N G TGSGKTTQL +YL E G++ +G++G TQPR+VAA+S
Sbjct: 54 PIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAAIS 113
Query: 646 VAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDSDLDKYRVIVMD 705
VA+RV+EEM LG KVGY +RF+D + T IKYMTDG LL+ L D +L K+ VI++D
Sbjct: 114 VAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVIILD 173
Query: 706 EAHERSLSTDVLFGILKKVVA-----RRRDFKLIVTSATLNAQKFSDFFGSVPIFHIPGR 760
EAHER+L+TD+LFG+LKK+ R+ K++V SAT+ K S FFG+ PIF IPGR
Sbjct: 174 EAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGR 233
Query: 761 TFPVN----TLYSKTPCED--YVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALK 814
+PV L E+ Y++A VK M IH+ GDIL+F+TGQ EIE +C L
Sbjct: 234 LYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLF 293
Query: 815 ERMEQL-----ISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETS 869
+ E + + TT + LLILP Y + D Q +IF G RKC+++TNI+ TS
Sbjct: 294 QMAESVDYDYDVQDTTLD--GLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATS 351
Query: 870 LTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTE 929
LT+DGI YV+D G+ K +NP++G+D L+V P+S C+R+Y++
Sbjct: 352 LTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTSSGKCFRIYSK 411
Query: 930 SAYLNEMLPSPV-PEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVL 988
+ N+ +P V PEI+RT+L +VV F ++DPP + IL ++ QL+
Sbjct: 412 D-FWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNERLILEALKQLYQC 470
Query: 989 GALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDR 1048
A++ G +T LG MVEFPL P L ++ L C D +L I +MLSV +VF RP D
Sbjct: 471 DAIDRSGHVTRLGLSMVEFPLPPHLTCAVIKAASLDCEDLLLPIAAMLSVENVFIRPVDP 530
Query: 1049 AEESDA 1054
+ +A
Sbjct: 531 EYQKEA 536
Score = 725 (260.3 bits), Expect = 7.1e-71, P = 7.1e-71
Identities = 163/482 (33%), Positives = 262/482 (54%)
Query: 776 YVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQL-----ISSTTREVPE 830
Y++A VK M IH+ GDIL+F+TGQ EIE +C L + E + + TT +
Sbjct: 255 YIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLD--G 312
Query: 831 LLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYN 890
LLILP Y + D Q +IF G RKC+++TNI+ TSLT+DGI YV+D G+ K +N
Sbjct: 313 LLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHN 372
Query: 891 PKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPV-PEIQRTNL 949
P++G+D L+V P+S C+R+Y++ + N+ +P V PEI+RT+L
Sbjct: 373 PRLGLDILEVVPISKSEALQRSGRAGRTSSGKCFRIYSKD-FWNQCMPDHVIPEIKRTSL 431
Query: 950 GNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPL 1009
+VV F ++DPP + IL ++ QL+ A++ G +T LG MVEFPL
Sbjct: 432 TSVVLTLKCLAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPL 491
Query: 1010 DPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAA-REKFFVQES---- 1064
P L ++ L C D +L I +MLSV +VF RP D + +A R + ++
Sbjct: 492 PPHLTCAVIKAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAAKAGGFN 551
Query: 1065 DHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQLLDILKTLK----IPL-TS 1119
D TL +++Q K WC++H++H + L A V +QL ++++ LK P T
Sbjct: 552 DFATLAVIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDFPRETF 611
Query: 1120 SGHDFDVVRKAICSAYFHNAARLKGVGEYINCR---NGMPCHLHPSSAIYGLGYTPEYVV 1176
G +V+R+ +C+ YF N AR + VG C G P H+HPSSA++ E+++
Sbjct: 612 EGPKHEVLRRCLCAGYFKNVAR-RSVGRTF-CTMDGRGSPVHIHPSSALHEQETKLEWII 669
Query: 1177 YHELILTTKEYMQCATAVEPQWLSELGPMFFSVKDSDTSMLEHKKKQKESKTAMEEEMEN 1236
+HE+++TTK Y + + +W+ +L P D S + ++ +++++ + EN
Sbjct: 670 FHEVLVTTKVYARIVCPIRYEWVRDLLPKLHEFNAHDLSSVARREVREDARRRWTNK-EN 728
Query: 1237 LR 1238
++
Sbjct: 729 VK 730
>UNIPROTKB|E2RPC8 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AAEX03006584 EMBL:AAEX03006585
Ensembl:ENSCAFT00000027962 Uniprot:E2RPC8
Length = 781
Score = 983 (351.1 bits), Expect = 5.0e-99, P = 5.0e-99
Identities = 210/486 (43%), Positives = 295/486 (60%)
Query: 586 PIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNGIVGCTQPRRVAAMS 645
PI R +L+Q +R+N G TGSGKTTQL +YL E G++ +G++G TQPR+VAA+S
Sbjct: 54 PIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAAIS 113
Query: 646 VAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDSDLDKYRVIVMD 705
VA+RV+EEM LG KVGY +RF+D + T IKYMTDG LL+ L D +L K+ VI++D
Sbjct: 114 VAQRVAEEMKCALGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVIILD 173
Query: 706 EAHERSLSTDVLFGILKKVVA-----RRRDFKLIVTSATLNAQKFSDFFGSVPIFHIPGR 760
EAHER+L+TD+LFG+LKK+ R+ K++V SAT+ K S FFG+ PIF IPGR
Sbjct: 174 EAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGR 233
Query: 761 TFPVN----TLYSKTPCED--YVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALK 814
+PV L E+ Y++A VK M IH+ GDIL+F+TGQ EIE +C L
Sbjct: 234 LYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLF 293
Query: 815 ERMEQL-----ISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETS 869
+ E + + TT + LLILP Y + D Q +IF G RKC+++TNI+ TS
Sbjct: 294 QMAESVDYDYDVQDTTLD--GLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATS 351
Query: 870 LTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTE 929
LT+DGI YV+D G+ K +NP++G+D L+V P+S C+R+Y++
Sbjct: 352 LTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTSSGKCFRIYSK 411
Query: 930 SAYLNEMLPSPV-PEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVL 988
+ N+ +P V PEI+RT+L +VV F ++DPP + IL ++ QL+
Sbjct: 412 D-FWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNERLILEALKQLYQC 470
Query: 989 GALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDR 1048
A++ G +T LG MVEFPL P L ++ L C D +L I +MLSV +VF RP D
Sbjct: 471 DAIDRSGHVTRLGLSMVEFPLPPHLTCAVIKAASLDCEDLLLPIAAMLSVENVFIRPVDP 530
Query: 1049 AEESDA 1054
+ +A
Sbjct: 531 EYQKEA 536
Score = 706 (253.6 bits), Expect = 8.2e-69, P = 8.2e-69
Identities = 159/485 (32%), Positives = 261/485 (53%)
Query: 776 YVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQL-----ISSTTREVPE 830
Y++A VK M IH+ GDIL+F+TGQ EIE +C L + E + + TT +
Sbjct: 255 YIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLD--G 312
Query: 831 LLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYN 890
LLILP Y + D Q +IF G RKC+++TNI+ TSLT+DGI YV+D G+ K +N
Sbjct: 313 LLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHN 372
Query: 891 PKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPV-PEIQRTNL 949
P++G+D L+V P+S C+R+Y++ + N+ +P V PEI+RT+L
Sbjct: 373 PRLGLDILEVVPISKSEALQRSGRAGRTSSGKCFRIYSKD-FWNQCMPDHVIPEIKRTSL 431
Query: 950 GNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPL 1009
+VV F ++DPP + IL ++ QL+ A++ G +T LG MVEFPL
Sbjct: 432 TSVVLTLKCLAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPL 491
Query: 1010 DPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAA-REKFFVQES---- 1064
P L ++ L C D +L I +MLSV +VF RP D + +A R + ++
Sbjct: 492 PPHLTCAVIKAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAAKAGGFN 551
Query: 1065 DHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQLLDILKTLK----IPL-TS 1119
D TL +++Q K WC++H++H + L A V +QL ++++ LK P T
Sbjct: 552 DFATLAVIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDFPRETF 611
Query: 1120 SGHDFDVVRKAICSAYFHNAARLKGVGEYINCR---NGMPCHLHPSSAIYGLGYTPEYVV 1176
G +V+R+ +C+ YF N AR + VG C G P H+H + ++ E+++
Sbjct: 612 EGPKHEVLRRCLCAGYFKNVAR-RSVGRTF-CTMDGRGSPVHIHQNCKLHEQETKLEWII 669
Query: 1177 YHELILTTKEYMQCATAVEPQWLSELGPMFFSVKDSDTSMLEHKKKQKESKTAMEEEMEN 1236
+HE+++TTK Y + + +W+ +L P D S + ++ +++++ + EN
Sbjct: 670 FHEVLVTTKVYARIVCPIRYEWVRDLLPKLHEFNAHDLSSVARREVREDARRRWTNK-EN 728
Query: 1237 LRKIQ 1241
++ ++
Sbjct: 729 VKHLK 733
>UNIPROTKB|Q8IX18 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOVERGEN:HBG039428 EMBL:AF461690 EMBL:AF260270
EMBL:AK025713 EMBL:AK095681 EMBL:BC024187 EMBL:AL832510
EMBL:AF319521 IPI:IPI00410110 IPI:IPI00797226 IPI:IPI01010408
RefSeq:NP_001159773.1 RefSeq:NP_078888.4 UniGene:Hs.29403
ProteinModelPortal:Q8IX18 SMR:Q8IX18 IntAct:Q8IX18 STRING:Q8IX18
PhosphoSite:Q8IX18 DMDM:116247771 PaxDb:Q8IX18 PRIDE:Q8IX18
DNASU:79665 Ensembl:ENST00000251241 GeneID:79665 KEGG:hsa:79665
UCSC:uc002ixn.2 CTD:79665 GeneCards:GC17P057642 HGNC:HGNC:18018
HPA:HPA044350 MIM:607570 neXtProt:NX_Q8IX18 PharmGKB:PA27227
InParanoid:Q8IX18 OMA:LYGSMPT PhylomeDB:Q8IX18 ChiTaRS:DHX40
GenomeRNAi:79665 NextBio:68866 ArrayExpress:Q8IX18 Bgee:Q8IX18
CleanEx:HS_DHX40 Genevestigator:Q8IX18 GermOnline:ENSG00000108406
Uniprot:Q8IX18
Length = 779
Score = 981 (350.4 bits), Expect = 8.2e-99, P = 8.2e-99
Identities = 209/486 (43%), Positives = 295/486 (60%)
Query: 586 PIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNGIVGCTQPRRVAAMS 645
PI R +++Q +R+N G TGSGKTTQL +YL E G++ +G++G TQPR+VAA+S
Sbjct: 54 PIQKQRKKIIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAAIS 113
Query: 646 VAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDSDLDKYRVIVMD 705
VA+RV+EEM LG KVGY +RF+D + T IKYMTDG LL+ L D +L K+ VI++D
Sbjct: 114 VAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVIILD 173
Query: 706 EAHERSLSTDVLFGILKKVVA-----RRRDFKLIVTSATLNAQKFSDFFGSVPIFHIPGR 760
EAHER+L+TD+LFG+LKK+ R+ K++V SAT+ K S FFG+ PIF IPGR
Sbjct: 174 EAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGR 233
Query: 761 TFPVN----TLYSKTPCED--YVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALK 814
+PV L E+ Y++A VK M IH+ GDIL+F+TGQ EIE +C L
Sbjct: 234 LYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLF 293
Query: 815 ERMEQL-----ISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETS 869
+ E + + TT + LLILP Y + D Q +IF G RKC+++TNI+ TS
Sbjct: 294 QMAESVDYDYDVQDTTLD--GLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATS 351
Query: 870 LTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTE 929
LT+DGI YV+D G+ K +NP++G+D L+V P+S C+R+Y++
Sbjct: 352 LTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTSSGKCFRIYSK 411
Query: 930 SAYLNEMLPSPV-PEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVL 988
+ N+ +P V PEI+RT+L +VV F ++DPP + IL ++ QL+
Sbjct: 412 D-FWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNERLILEALKQLYQC 470
Query: 989 GALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDR 1048
A++ G +T LG MVEFPL P L ++ L C D +L I +MLSV +VF RP D
Sbjct: 471 DAIDRSGHVTRLGLSMVEFPLPPHLTCAVIKAASLDCEDLLLPIAAMLSVENVFIRPVDP 530
Query: 1049 AEESDA 1054
+ +A
Sbjct: 531 EYQKEA 536
Score = 729 (261.7 bits), Expect = 2.6e-71, P = 2.6e-71
Identities = 163/485 (33%), Positives = 265/485 (54%)
Query: 776 YVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQL-----ISSTTREVPE 830
Y++A VK M IH+ GDIL+F+TGQ EIE +C L + E + + TT +
Sbjct: 255 YIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLD--G 312
Query: 831 LLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYN 890
LLILP Y + D Q +IF G RKC+++TNI+ TSLT+DGI YV+D G+ K +N
Sbjct: 313 LLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHN 372
Query: 891 PKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPV-PEIQRTNL 949
P++G+D L+V P+S C+R+Y++ + N+ +P V PEI+RT+L
Sbjct: 373 PRLGLDILEVVPISKSEALQRSGRAGRTSSGKCFRIYSKD-FWNQCMPDHVIPEIKRTSL 431
Query: 950 GNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPL 1009
+VV F ++DPP + IL ++ QL+ A++ G +T LG MVEFPL
Sbjct: 432 TSVVLTLKCLAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPL 491
Query: 1010 DPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAA-REKFFVQES---- 1064
P L ++ L C D +L I +MLSV +VF RP D + +A R + ++
Sbjct: 492 PPHLTCAVIKAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAAKAGGFN 551
Query: 1065 DHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQLLDILKTLK----IPL-TS 1119
D TL +++Q K WC++H++H + L A V +QL ++++ LK P T
Sbjct: 552 DFATLAVIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDFPKETF 611
Query: 1120 SGHDFDVVRKAICSAYFHNAARLKGVGEYINCR---NGMPCHLHPSSAIYGLGYTPEYVV 1176
G +V+R+ +C+ YF N AR + VG C G P H+HPSSA++ E+++
Sbjct: 612 EGPKHEVLRRCLCAGYFKNVAR-RSVGRTF-CTMDGRGSPVHIHPSSALHEQETKLEWII 669
Query: 1177 YHELILTTKEYMQCATAVEPQWLSELGPMFFSVKDSDTSMLEHKKKQKESKTAMEEEMEN 1236
+HE+++TTK Y + + +W+ +L P D S + ++ +++++ + EN
Sbjct: 670 FHEVLVTTKVYARIVCPIRYEWVRDLLPKLHEFNAHDLSSVARREVREDARRRWTNK-EN 728
Query: 1237 LRKIQ 1241
+++++
Sbjct: 729 VKQLK 733
>MGI|MGI:1914737 [details] [associations]
symbol:Dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide 40"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:1914737
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 EMBL:AL592222 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104421 CTD:79665 OMA:LYGSMPT EMBL:AK004610
EMBL:AK010512 EMBL:AK031000 EMBL:AK075991 EMBL:AL596111
EMBL:BC058276 IPI:IPI00453964 RefSeq:NP_080467.3 UniGene:Mm.260627
ProteinModelPortal:Q6PE54 SMR:Q6PE54 STRING:Q6PE54
PhosphoSite:Q6PE54 PaxDb:Q6PE54 PRIDE:Q6PE54
Ensembl:ENSMUST00000018569 GeneID:67487 KEGG:mmu:67487
UCSC:uc007ktc.1 InParanoid:Q6PE54 OrthoDB:EOG48PMJH NextBio:324718
Bgee:Q6PE54 CleanEx:MM_DHX40 Genevestigator:Q6PE54
GermOnline:ENSMUSG00000018425 Uniprot:Q6PE54
Length = 779
Score = 979 (349.7 bits), Expect = 1.3e-98, P = 1.3e-98
Identities = 209/486 (43%), Positives = 295/486 (60%)
Query: 586 PIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNGIVGCTQPRRVAAMS 645
PI R +L+Q +R+N G TGSGKTTQL +YL E G++ +G++G TQPR+VAA+S
Sbjct: 54 PIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAAIS 113
Query: 646 VAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDSDLDKYRVIVMD 705
VA+RV+EEM LG KVGY +RF+D + T IKYMTDG LL+ L D +L K+ VI++D
Sbjct: 114 VAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLSKFSVIILD 173
Query: 706 EAHERSLSTDVLFGILKKVVA-----RRRDFKLIVTSATLNAQKFSDFFGSVPIFHIPGR 760
EAHER+L+TD+LFG+LKK+ R+ K++V SAT+ K S FFG+ PIF IPGR
Sbjct: 174 EAHERTLTTDILFGLLKKLFQDKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGR 233
Query: 761 TFPVN----TLYSKTPCED--YVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALK 814
+PV L E+ Y++A VK M IH+ GDIL+F+TGQ EIE +C L
Sbjct: 234 LYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLF 293
Query: 815 ERMEQL-----ISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETS 869
+ E + + TT + LLILP Y + D Q +IF G RKC+++TNI+ TS
Sbjct: 294 QMAESVDYDYDVQDTTLD--GLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATS 351
Query: 870 LTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTE 929
LT+DGI YV+D G+ K +NP++G+D L+V P+S C+R+Y++
Sbjct: 352 LTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTASGKCFRIYSK 411
Query: 930 SAYLNEMLPSPV-PEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVL 988
+ ++ +P V PEI+RT+L +VV F ++DPP + IL ++ QL+
Sbjct: 412 E-FWSQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNERLILEALKQLYQC 470
Query: 989 GALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDR 1048
A++ G +T LG MVEFPL P L ++ L C D +L I +MLSV +VF RP D
Sbjct: 471 DAIDRSGHVTRLGLSMVEFPLPPHLTCAVIRAASLDCEDLLLPIAAMLSVENVFIRPVDP 530
Query: 1049 AEESDA 1054
+ +A
Sbjct: 531 EYQKEA 536
Score = 727 (261.0 bits), Expect = 4.3e-71, P = 4.3e-71
Identities = 162/485 (33%), Positives = 266/485 (54%)
Query: 776 YVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQL-----ISSTTREVPE 830
Y++A VK M IH+ GDIL+F+TGQ EIE +C L + E + + TT +
Sbjct: 255 YIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLD--G 312
Query: 831 LLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYN 890
LLILP Y + D Q +IF G RKC+++TNI+ TSLT+DGI YV+D G+ K +N
Sbjct: 313 LLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHN 372
Query: 891 PKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPV-PEIQRTNL 949
P++G+D L+V P+S C+R+Y++ + ++ +P V PEI+RT+L
Sbjct: 373 PRLGLDILEVVPISKSEALQRSGRAGRTASGKCFRIYSKE-FWSQCMPDHVIPEIKRTSL 431
Query: 950 GNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPL 1009
+VV F ++DPP + IL ++ QL+ A++ G +T LG MVEFPL
Sbjct: 432 TSVVLTLKCLAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPL 491
Query: 1010 DPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAA-REKFFVQES---- 1064
P L ++ L C D +L I +MLSV +VF RP D + +A R + ++
Sbjct: 492 PPHLTCAVIRAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAAKAGGFN 551
Query: 1065 DHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQLLDILKTLK----IPL-TS 1119
D TL +++Q K WC++H++H + L A V +QL ++++ LK P T
Sbjct: 552 DFATLAVIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDFPRETF 611
Query: 1120 SGHDFDVVRKAICSAYFHNAARLKGVGEYINCR---NGMPCHLHPSSAIYGLGYTPEYVV 1176
G +V+R+ +C+ YF N AR + VG C G P H+HPSSA++ E+++
Sbjct: 612 EGPKHEVLRRCLCAGYFKNVAR-RSVGRTF-CTMDGRGSPVHIHPSSALHEQETKLEWII 669
Query: 1177 YHELILTTKEYMQCATAVEPQWLSELGPMFFSVKDSDTSMLEHKKKQKESKTAMEEEMEN 1236
+HE+++TTK Y + + +W+ +L P + D S + ++ +++++ + EN
Sbjct: 670 FHEVLVTTKVYARIVCPIRYEWVRDLLPKLHELNAHDLSSVARREMREDARRKWTNK-EN 728
Query: 1237 LRKIQ 1241
+++++
Sbjct: 729 VKQLK 733
>UNIPROTKB|C9JR60 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
RefSeq:NP_001159773.1 UniGene:Hs.29403 GeneID:79665 KEGG:hsa:79665
CTD:79665 HGNC:HGNC:18018 ChiTaRS:DHX40 OrthoDB:EOG48PMJH
EMBL:AC091271 EMBL:AC004167 IPI:IPI00952676
ProteinModelPortal:C9JR60 STRING:C9JR60 Ensembl:ENST00000425628
ArrayExpress:C9JR60 Uniprot:C9JR60
Length = 702
Score = 961 (343.3 bits), Expect = 1.1e-96, P = 1.1e-96
Identities = 216/596 (36%), Positives = 335/596 (56%)
Query: 676 TLIKYMTDGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVA-----RRRD 730
T IKYMTDG LL+ L D +L K+ VI++DEAHER+L+TD+LFG+LKK+ R+
Sbjct: 67 TAIKYMTDGCLLKHILGDPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEH 126
Query: 731 FKLIVTSATLNAQKFSDFFGSVPIFHIPGRTFPVN----TLYSKTPCED--YVEAAVKQA 784
K++V SAT+ K S FFG+ PIF IPGR +PV L E+ Y++A VK
Sbjct: 127 LKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVT 186
Query: 785 MTIHITSPPGDILIFMTGQDEIEAACFALKERMEQL-----ISSTTREVPELLILPIYSQ 839
M IH+ GDIL+F+TGQ EIE +C L + E + + TT + LLILP Y
Sbjct: 187 MDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLD--GLLILPCYGS 244
Query: 840 LPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQ 899
+ D Q +IF G RKC+++TNI+ TSLT+DGI YV+D G+ K +NP++G+D L+
Sbjct: 245 MTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILE 304
Query: 900 VFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPV-PEIQRTNLGNVVXXXXX 958
V P+S C+R+Y++ + N+ +P V PEI+RT+L +VV
Sbjct: 305 VVPISKSEALQRSGRAGRTSSGKCFRIYSKD-FWNQCMPDHVIPEIKRTSLTSVVLTLKC 363
Query: 959 XXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLL 1018
F ++DPP + IL ++ QL+ A++ G +T LG MVEFPL P L ++
Sbjct: 364 LAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAVI 423
Query: 1019 MGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAA-REKFFVQES----DHLTLLYVY 1073
L C D +L I +MLSV +VF RP D + +A R + ++ D TL ++
Sbjct: 424 KAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAAKAGGFNDFATLAVIF 483
Query: 1074 QQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQLLDILKTLK----IPL-TSSGHDFDVVR 1128
+Q K WC++H++H + L A V +QL ++++ LK P T G +V+R
Sbjct: 484 EQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDFPKETFEGPKHEVLR 543
Query: 1129 KAICSAYFHNAARLKGVGEYINCR---NGMPCHLHPSSAIYGLGYTPEYVVYHELILTTK 1185
+ +C+ YF N AR + VG C G P H+HPSSA++ E++++HE+++TTK
Sbjct: 544 RCLCAGYFKNVAR-RSVGRTF-CTMDGRGSPVHIHPSSALHEQETKLEWIIFHEVLVTTK 601
Query: 1186 EYMQCATAVEPQWLSELGPMFFSVKDSDTSMLEHKKKQKESKTAMEEEMENLRKIQ 1241
Y + + +W+ +L P D S + ++ +++++ + EN+++++
Sbjct: 602 VYARIVCPIRYEWVRDLLPKLHEFNAHDLSSVARREVREDARRRWTNK-ENVKQLK 656
>UNIPROTKB|Q608K8 [details] [associations]
symbol:MCA1482 "ATP-dependent helicase HrpA" species:243233
"Methylococcus capsulatus str. Bath" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR010222
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:AE017282 GenomeReviews:AE017282_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578
OMA:TYQFEPG InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:YP_113939.1 ProteinModelPortal:Q608K8 GeneID:3104911
KEGG:mca:MCA1482 PATRIC:22606802 Uniprot:Q608K8
Length = 1294
Score = 957 (341.9 bits), Expect = 2.9e-96, P = 2.9e-96
Identities = 223/641 (34%), Positives = 347/641 (54%)
Query: 580 EQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNGIVGCTQPR 639
E + LP+ R E+ + IR+NQ GETGSGKTTQL + LE G G +G TQPR
Sbjct: 69 EYPEELPVSERRGEIAEAIRQNQVVIVCGETGSGKTTQLPKICLEAGRGIQGYIGHTQPR 128
Query: 640 RVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDSDLDKY 699
R+AA SVA R+++E+ LG+ VGY +RF D T P +LIK MTDG+LL ET D LD+Y
Sbjct: 129 RIAARSVAARIADELKRPLGETVGYKVRFHDQTRPDSLIKLMTDGILLAETQTDRFLDQY 188
Query: 700 RVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPIFHIPG 759
+++DEAHERSL+ D L G LK ++ RR D KL++TSAT++ ++FS F + PI +PG
Sbjct: 189 DTLIVDEAHERSLNIDFLLGYLKWLLPRRHDLKLVITSATIDPERFSRHFDNAPIVRVPG 248
Query: 760 RTFPVNTLY----SKTPCEDYVEAAVKQAMT-----IHITSPPGDILIFMTGQDEIEAAC 810
RT+PV Y S D E +QA+ +H + GDILIF++G+ EI
Sbjct: 249 RTYPVEIRYRPPDSAEEESDETERGEQQAILDAVDELHRENT-GDILIFLSGEREIRDTA 307
Query: 811 FALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSL 870
+L++ + +LP+YS+L Q KIF+ G R+ ++ATN+AETSL
Sbjct: 308 ESLRKH----------HPADCEVLPLYSRLTVSEQEKIFKP--HGRRRIVLATNVAETSL 355
Query: 871 TVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTES 930
TV GI VID GY ++ Y+ + + L + +S C RLY+E
Sbjct: 356 TVPGIRGVIDAGYARISRYSHRSKLQRLPIEKISRASANQRAGRCGRVGPGVCIRLYSEQ 415
Query: 931 AYLNEMLPSPV-PEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLG 989
+LN P PEI RTNL V+ F F++PP + + + + L +
Sbjct: 416 DFLNR--PEFTDPEILRTNLAAVILQMKALNLGDIRVFPFVEPPDERLVRDGLRTLQEIN 473
Query: 990 ALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRA 1049
AL+ G LT+LG ++ P+DP L ++LL G + CL EV IV+ LSVP RP D+A
Sbjct: 474 ALDAQGRLTELGRRLARLPVDPRLGRILLAGAEENCLSEVCIIVAALSVPDPRERPADKA 533
Query: 1050 EESDAAREKFFVQESDHLTLLYVYQQWKEHQYR--GD----WCEEHYLHVKSLRKAREVR 1103
+ +D +F +SD + +L ++ ++E + G +C +++L +R+ R++
Sbjct: 534 QAADQKHARFRHPDSDFMAILALWNDYEEQRQHLSGSKLRQYCRDNFLSALRMREWRDIH 593
Query: 1104 SQLLDILK-TLKIPLTSSGHDFDVVRKAICSAYFHNAARLKGVGEYINCRNGMPCHLHPS 1162
Q+L+++K L + D+ + +A+ + + + EY+ R G + P
Sbjct: 594 QQILEVVKGELGLRPNQVPADYGEIHRALLTGLLCHVGFRQDQNEYVGVR-GQKFQIFPG 652
Query: 1163 SAIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELG 1203
S ++ P +++ E + T++ Y + +EP+W+ + G
Sbjct: 653 SFLFKT--RPVWIISAEQVETSRVYARTVARIEPEWIEKCG 691
>UNIPROTKB|I3LU50 [details] [associations]
symbol:I3LU50 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192
GO:GO:0008026 GeneTree:ENSGT00700000104421
Ensembl:ENSSSCT00000026672 OMA:GHEVAFS Uniprot:I3LU50
Length = 265
Score = 945 (337.7 bits), Expect = 5.3e-95, P = 5.3e-95
Identities = 180/261 (68%), Positives = 222/261 (85%)
Query: 644 MSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDSDLDKYRVIV 703
MSVAKRVSEEM LG++VGYAIRFED T STLIKYMTDG+LLRE+L+++DLD Y I+
Sbjct: 1 MSVAKRVSEEMGGNLGEEVGYAIRFEDCTSESTLIKYMTDGILLRESLREADLDHYSAII 60
Query: 704 MDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPIFHIPGRTFP 763
MDEAHERSL+TDVLFG+L++VVARR D KLIVTSAT++A+KF+ FFG+VPIFHIPGRTFP
Sbjct: 61 MDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFASFFGNVPIFHIPGRTFP 120
Query: 764 VNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQLISS 823
V+ L+SKTP EDYVEAAVKQ++ +H++ PGDILIFM GQ++IE + E +E+L
Sbjct: 121 VDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEEL--- 177
Query: 824 TTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGY 883
P L +LPIYSQLP+DLQAKIF+KA +G RKCIVATNIAETSLTVDGI +VID+GY
Sbjct: 178 --ENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGY 235
Query: 884 GKMKVYNPKMGMDALQVFPVS 904
K+KV+NP++GMDALQ++P+S
Sbjct: 236 CKLKVFNPRIGMDALQIYPIS 256
>UNIPROTKB|Q8EEY1 [details] [associations]
symbol:hrpA "ATP-dependent helicase HrpA" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578
OMA:TYQFEPG InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:NP_717826.1 ProteinModelPortal:Q8EEY1 GeneID:1169965
KEGG:son:SO_2229 PATRIC:23524089 ProtClustDB:CLSK906644
Uniprot:Q8EEY1
Length = 1293
Score = 944 (337.4 bits), Expect = 6.8e-95, P = 6.8e-95
Identities = 233/666 (34%), Positives = 359/666 (53%)
Query: 554 REDAKFSQHMKKG-EAVSDFAKSKTLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGS 612
+E AK ++ + E V K++ LP+ +R+++ + I NQ GETGS
Sbjct: 44 QELAKLAEQAQAAFEKVEQRLKARPRINYPDNLPVSGMREDIAKAISANQVVIIAGETGS 103
Query: 613 GKTTQLTQYLLEDGYTTNGIVGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVT 672
GKTTQL + LE G + G +G TQPRR+AA SVA RV+EE+ + LG+ VG+ +RF D
Sbjct: 104 GKTTQLPKICLELGLGSRGFIGHTQPRRLAARSVASRVAEELQSPLGEVVGFKVRFADAL 163
Query: 673 GPSTLIKYMTDGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFK 732
+ IK MTDG+LL E D LD+Y I++DEAHERSL+ D + G LK+++ +R D K
Sbjct: 164 KSESYIKLMTDGILLAELTSDRYLDQYDTIIIDEAHERSLNIDFILGYLKQILKKRPDLK 223
Query: 733 LIVTSATLNAQKFSDFFGSVPIFHIPGRTFPVNTLY----SKTPCE-DYVEAAVKQAMTI 787
+I+TSAT++ ++FS F + PI + GRT+PV T Y T + D +E + A+
Sbjct: 224 IIITSATIDVERFSKHFNNAPIIEVSGRTYPVETRYRPLVQDTEADLDQIEG-IFAAVDE 282
Query: 788 HITSPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAK 847
+ GDILIFM G+ EI ++ EQL R+ ILP+Y++L Q+K
Sbjct: 283 LVAEGLGDILIFMNGEREI-------RDTAEQLNRRNYRDTE---ILPLYARLSYGEQSK 332
Query: 848 IFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXX 907
+F + G R+ ++ATN+AETSLTV GI YVID G ++ Y+ + + L + P+S
Sbjct: 333 VFS-SHTG-RRIVLATNVAETSLTVPGIRYVIDPGTARISRYSYRTKVQRLPIEPISQAS 390
Query: 908 XXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXF 967
C RLY E+ + N + PEI RTNL +V+ F
Sbjct: 391 ANQRQGRCGRVGPGICIRLYDEADFNNRPAFTD-PEILRTNLASVILQMLAIGLGDIAAF 449
Query: 968 DFMDPPPQENILNSMYQLWVLGALN----NVGALTDLGWKMVEFPLDPPLAKMLLMGEQL 1023
F++PP +I + L L A+ N+ LT LG ++ + P+DP LA+M++ QL
Sbjct: 450 PFIEPPDPRHIRDGFLLLEELQAVKQQKGNI-VLTPLGRQLSQIPVDPRLARMVIESHQL 508
Query: 1024 GCLDEVLTIVSMLSVPSVFFRPKDRAEESDAAREKFFVQESDHLTLLYVYQQWKEHQ--- 1080
GCL+EVL I S LS+ RP D+ + SD A +F +SD ++ + ++Q KE Q
Sbjct: 509 GCLNEVLVIASGLSIQDPRERPMDKKQASDEAHRRFADPQSDFVSWVNLWQHLKEQQKEL 568
Query: 1081 ----YRGDWCEEHYLHVKSLRKAREVRSQLLDILKTLKIPLTSSGHDFDVVRKAICSAYF 1136
+R C + YL +R+ +++ +QL + LK L + ++D + +A+ S
Sbjct: 569 SASQFRKK-CRDEYLAYLRVREWQDLYTQLKQAVHDLKWRLNDTPANYDALHRALLSGLL 627
Query: 1137 HNAARLKGVGEYINCRNGMPCHLHPSSAIYGLGYTPEYVVYHELILTTKEYMQCATAVEP 1196
+ EY+ RN + P S + G P++++ EL+ T+K + +C +EP
Sbjct: 628 SHIGFKDNNNEYLGARN-RKFFVFPGSPLAKKG--PKWIMAAELMETSKLFARCCAKIEP 684
Query: 1197 QWLSEL 1202
+WL L
Sbjct: 685 EWLEPL 690
>TIGR_CMR|SO_2229 [details] [associations]
symbol:SO_2229 "ATP-dependent helicase HrpA" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578
OMA:TYQFEPG InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:NP_717826.1 ProteinModelPortal:Q8EEY1 GeneID:1169965
KEGG:son:SO_2229 PATRIC:23524089 ProtClustDB:CLSK906644
Uniprot:Q8EEY1
Length = 1293
Score = 944 (337.4 bits), Expect = 6.8e-95, P = 6.8e-95
Identities = 233/666 (34%), Positives = 359/666 (53%)
Query: 554 REDAKFSQHMKKG-EAVSDFAKSKTLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGS 612
+E AK ++ + E V K++ LP+ +R+++ + I NQ GETGS
Sbjct: 44 QELAKLAEQAQAAFEKVEQRLKARPRINYPDNLPVSGMREDIAKAISANQVVIIAGETGS 103
Query: 613 GKTTQLTQYLLEDGYTTNGIVGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVT 672
GKTTQL + LE G + G +G TQPRR+AA SVA RV+EE+ + LG+ VG+ +RF D
Sbjct: 104 GKTTQLPKICLELGLGSRGFIGHTQPRRLAARSVASRVAEELQSPLGEVVGFKVRFADAL 163
Query: 673 GPSTLIKYMTDGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFK 732
+ IK MTDG+LL E D LD+Y I++DEAHERSL+ D + G LK+++ +R D K
Sbjct: 164 KSESYIKLMTDGILLAELTSDRYLDQYDTIIIDEAHERSLNIDFILGYLKQILKKRPDLK 223
Query: 733 LIVTSATLNAQKFSDFFGSVPIFHIPGRTFPVNTLY----SKTPCE-DYVEAAVKQAMTI 787
+I+TSAT++ ++FS F + PI + GRT+PV T Y T + D +E + A+
Sbjct: 224 IIITSATIDVERFSKHFNNAPIIEVSGRTYPVETRYRPLVQDTEADLDQIEG-IFAAVDE 282
Query: 788 HITSPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAK 847
+ GDILIFM G+ EI ++ EQL R+ ILP+Y++L Q+K
Sbjct: 283 LVAEGLGDILIFMNGEREI-------RDTAEQLNRRNYRDTE---ILPLYARLSYGEQSK 332
Query: 848 IFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXX 907
+F + G R+ ++ATN+AETSLTV GI YVID G ++ Y+ + + L + P+S
Sbjct: 333 VFS-SHTG-RRIVLATNVAETSLTVPGIRYVIDPGTARISRYSYRTKVQRLPIEPISQAS 390
Query: 908 XXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXF 967
C RLY E+ + N + PEI RTNL +V+ F
Sbjct: 391 ANQRQGRCGRVGPGICIRLYDEADFNNRPAFTD-PEILRTNLASVILQMLAIGLGDIAAF 449
Query: 968 DFMDPPPQENILNSMYQLWVLGALN----NVGALTDLGWKMVEFPLDPPLAKMLLMGEQL 1023
F++PP +I + L L A+ N+ LT LG ++ + P+DP LA+M++ QL
Sbjct: 450 PFIEPPDPRHIRDGFLLLEELQAVKQQKGNI-VLTPLGRQLSQIPVDPRLARMVIESHQL 508
Query: 1024 GCLDEVLTIVSMLSVPSVFFRPKDRAEESDAAREKFFVQESDHLTLLYVYQQWKEHQ--- 1080
GCL+EVL I S LS+ RP D+ + SD A +F +SD ++ + ++Q KE Q
Sbjct: 509 GCLNEVLVIASGLSIQDPRERPMDKKQASDEAHRRFADPQSDFVSWVNLWQHLKEQQKEL 568
Query: 1081 ----YRGDWCEEHYLHVKSLRKAREVRSQLLDILKTLKIPLTSSGHDFDVVRKAICSAYF 1136
+R C + YL +R+ +++ +QL + LK L + ++D + +A+ S
Sbjct: 569 SASQFRKK-CRDEYLAYLRVREWQDLYTQLKQAVHDLKWRLNDTPANYDALHRALLSGLL 627
Query: 1137 HNAARLKGVGEYINCRNGMPCHLHPSSAIYGLGYTPEYVVYHELILTTKEYMQCATAVEP 1196
+ EY+ RN + P S + G P++++ EL+ T+K + +C +EP
Sbjct: 628 SHIGFKDNNNEYLGARN-RKFFVFPGSPLAKKG--PKWIMAAELMETSKLFARCCAKIEP 684
Query: 1197 QWLSEL 1202
+WL L
Sbjct: 685 EWLEPL 690
>UNIPROTKB|Q9KS77 [details] [associations]
symbol:VC1382 "ATP-dependent helicase HrpA" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0004386
"helicase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GenomeReviews:AE003852_GR GO:GO:0003676 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 InterPro:IPR024590 Pfam:PF11898
TIGRFAMs:TIGR01967 EMBL:AE004217 PIR:F82207 RefSeq:NP_231026.2
ProteinModelPortal:Q9KS77 DNASU:2614836 GeneID:2614836
KEGG:vch:VC1382 PATRIC:20081832 Uniprot:Q9KS77
Length = 1309
Score = 925 (330.7 bits), Expect = 1.2e-92, P = 1.2e-92
Identities = 238/666 (35%), Positives = 352/666 (52%)
Query: 567 EAVSDFAKSKTLAEQR-------QY---LPIFSVRDELLQVIRENQXXXXXGETGSGKTT 616
E D A+S + EQR +Y LP+ RD++ Q I +Q GETGSGKTT
Sbjct: 59 EIALDIAQSMMVVEQRKQQMPKIEYPALLPVSQKRDDIAQAIAHHQVVIVAGETGSGKTT 118
Query: 617 QLTQYLLEDGYTTNGIVGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPST 676
QL + E G G++G TQPRR+AA SVA R++EEM+TELG VGY +RF D T
Sbjct: 119 QLPKICAELGRGKYGLIGHTQPRRLAARSVANRIAEEMETELGGFVGYKVRFTDQISDQT 178
Query: 677 LIKYMTDGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVT 736
IK MTDG+LL E D L++Y I++DEAHERSL+ D + G LK+++ RR D K+I+T
Sbjct: 179 QIKLMTDGILLAEIQNDRFLNQYDTIIIDEAHERSLNIDFILGYLKQLLPRRPDLKVIIT 238
Query: 737 SATLNAQKFSDFFGSVPIFHIPGRTFPVNTLYSKTPCEDYVEA------AVKQAMTIHIT 790
SAT++ ++FS F + PI + GRT+PV Y +D E+ + QA+
Sbjct: 239 SATIDPERFSKHFSNAPIIEVSGRTYPVEVRYRPLAGDDDSESDRDQLEGIFQAVDELCD 298
Query: 791 SPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFE 850
GDILIFM G+ EI AL +R R+ I+P+Y++L A Q KIF+
Sbjct: 299 EGLGDILIFMNGEREIRDTADALSKR-------NLRDTE---IVPLYARLSAGEQNKIFQ 348
Query: 851 KAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXX 910
R+ ++ATN+AETSLTV GI YVID G ++ Y+ + + L + P+S
Sbjct: 349 P--HAGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQ 406
Query: 911 XXXXXXXXXXXXCYRLYTESAYLNEMLPSPV-PEIQRTNLGNVVXXXXXXXXXXXXXFDF 969
C RLY+E +L+ P PEI RTNL +V+ F F
Sbjct: 407 RKGRCGRTEEGICIRLYSEEDFLSR--PEFTDPEILRTNLASVILQMTALGLGDIEAFPF 464
Query: 970 MDPPPQENILNSMYQLWVLGALNNV-----GALTDLGWKMVEFPLDPPLAKMLLMGEQLG 1024
++ P + NI + + L LGA+N+ LT+ G ++ P+DP LA+M+L +LG
Sbjct: 465 VEAPDKRNIQDGVRLLEELGAINDQIKDPKKRLTESGKQLARLPIDPRLARMVLEASKLG 524
Query: 1025 CLDEVLTIVSMLSVPSVFFRPKDRAEESDAAREKFFVQESDHLTLL----YVYQQWK--- 1077
CL EV+ I S LS+ RP D+ + +D +F ++SD LTL+ Y+ QQ K
Sbjct: 525 CLKEVMIIASALSIQDPRERPSDKQQSADDKHRRFNHEDSDFLTLVNLWHYIGQQQKALT 584
Query: 1078 EHQYRGDWCEEHYLHVKSLRKAREVRSQLLDILKTLKIPLTSSGHDFDVVRKAICSAYF- 1136
+Q+R C+ YL+ +R+ ++V +QL + + L + V AI
Sbjct: 585 SNQFRRQ-CKLDYLNYLRVREWQDVYTQLHQSTREMGFKLNDEPGSYHAVHSAILVGLLS 643
Query: 1137 HNAARLKGVGEYINCRNGMPCHLHPSSAIYGLGYTPEYVVYHELILTTKEYMQCATAVEP 1196
H + + EY RN ++ P+S ++ P++V+ EL+ T+K + + +EP
Sbjct: 644 HIGMKDQEKNEYHGARNAR-FNIFPASGLFKK--QPKWVMSAELVETSKLWARVVAKIEP 700
Query: 1197 QWLSEL 1202
W+ L
Sbjct: 701 DWIEPL 706
>TIGR_CMR|VC_1382 [details] [associations]
symbol:VC_1382 "ATP-dependent helicase HrpA" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0004386 "helicase activity"
evidence=ISS] [GO:0008152 "metabolic process" evidence=ISS]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR010222 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GenomeReviews:AE003852_GR GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 InterPro:IPR024590 Pfam:PF11898
TIGRFAMs:TIGR01967 EMBL:AE004217 PIR:F82207 RefSeq:NP_231026.2
ProteinModelPortal:Q9KS77 DNASU:2614836 GeneID:2614836
KEGG:vch:VC1382 PATRIC:20081832 Uniprot:Q9KS77
Length = 1309
Score = 925 (330.7 bits), Expect = 1.2e-92, P = 1.2e-92
Identities = 238/666 (35%), Positives = 352/666 (52%)
Query: 567 EAVSDFAKSKTLAEQR-------QY---LPIFSVRDELLQVIRENQXXXXXGETGSGKTT 616
E D A+S + EQR +Y LP+ RD++ Q I +Q GETGSGKTT
Sbjct: 59 EIALDIAQSMMVVEQRKQQMPKIEYPALLPVSQKRDDIAQAIAHHQVVIVAGETGSGKTT 118
Query: 617 QLTQYLLEDGYTTNGIVGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPST 676
QL + E G G++G TQPRR+AA SVA R++EEM+TELG VGY +RF D T
Sbjct: 119 QLPKICAELGRGKYGLIGHTQPRRLAARSVANRIAEEMETELGGFVGYKVRFTDQISDQT 178
Query: 677 LIKYMTDGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVT 736
IK MTDG+LL E D L++Y I++DEAHERSL+ D + G LK+++ RR D K+I+T
Sbjct: 179 QIKLMTDGILLAEIQNDRFLNQYDTIIIDEAHERSLNIDFILGYLKQLLPRRPDLKVIIT 238
Query: 737 SATLNAQKFSDFFGSVPIFHIPGRTFPVNTLYSKTPCEDYVEA------AVKQAMTIHIT 790
SAT++ ++FS F + PI + GRT+PV Y +D E+ + QA+
Sbjct: 239 SATIDPERFSKHFSNAPIIEVSGRTYPVEVRYRPLAGDDDSESDRDQLEGIFQAVDELCD 298
Query: 791 SPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFE 850
GDILIFM G+ EI AL +R R+ I+P+Y++L A Q KIF+
Sbjct: 299 EGLGDILIFMNGEREIRDTADALSKR-------NLRDTE---IVPLYARLSAGEQNKIFQ 348
Query: 851 KAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXX 910
R+ ++ATN+AETSLTV GI YVID G ++ Y+ + + L + P+S
Sbjct: 349 P--HAGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQ 406
Query: 911 XXXXXXXXXXXXCYRLYTESAYLNEMLPSPV-PEIQRTNLGNVVXXXXXXXXXXXXXFDF 969
C RLY+E +L+ P PEI RTNL +V+ F F
Sbjct: 407 RKGRCGRTEEGICIRLYSEEDFLSR--PEFTDPEILRTNLASVILQMTALGLGDIEAFPF 464
Query: 970 MDPPPQENILNSMYQLWVLGALNNV-----GALTDLGWKMVEFPLDPPLAKMLLMGEQLG 1024
++ P + NI + + L LGA+N+ LT+ G ++ P+DP LA+M+L +LG
Sbjct: 465 VEAPDKRNIQDGVRLLEELGAINDQIKDPKKRLTESGKQLARLPIDPRLARMVLEASKLG 524
Query: 1025 CLDEVLTIVSMLSVPSVFFRPKDRAEESDAAREKFFVQESDHLTLL----YVYQQWK--- 1077
CL EV+ I S LS+ RP D+ + +D +F ++SD LTL+ Y+ QQ K
Sbjct: 525 CLKEVMIIASALSIQDPRERPSDKQQSADDKHRRFNHEDSDFLTLVNLWHYIGQQQKALT 584
Query: 1078 EHQYRGDWCEEHYLHVKSLRKAREVRSQLLDILKTLKIPLTSSGHDFDVVRKAICSAYF- 1136
+Q+R C+ YL+ +R+ ++V +QL + + L + V AI
Sbjct: 585 SNQFRRQ-CKLDYLNYLRVREWQDVYTQLHQSTREMGFKLNDEPGSYHAVHSAILVGLLS 643
Query: 1137 HNAARLKGVGEYINCRNGMPCHLHPSSAIYGLGYTPEYVVYHELILTTKEYMQCATAVEP 1196
H + + EY RN ++ P+S ++ P++V+ EL+ T+K + + +EP
Sbjct: 644 HIGMKDQEKNEYHGARNAR-FNIFPASGLFKK--QPKWVMSAELVETSKLWARVVAKIEP 700
Query: 1197 QWLSEL 1202
W+ L
Sbjct: 701 DWIEPL 706
>ZFIN|ZDB-GENE-061207-30 [details] [associations]
symbol:dhx34 "DEAH (Asp-Glu-Ala-His) box polypeptide
34" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IMP] [GO:0009790 "embryo
development" evidence=IMP] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR015880
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00355
SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-061207-30 GO:GO:0005524
GO:GO:0000184 GO:GO:0008270 GO:GO:0003676 GO:GO:0005622
GO:GO:0009790 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
CTD:9704 HOGENOM:HOG000232193 OMA:DSDQVFH OrthoDB:EOG4GB75B
GeneTree:ENSGT00700000104421 HOVERGEN:HBG051355 EMBL:BX908775
IPI:IPI00503372 RefSeq:NP_001121805.1 UniGene:Dr.50626
Ensembl:ENSDART00000086943 GeneID:555838 KEGG:dre:555838
InParanoid:A2BIE5 NextBio:20881188 Uniprot:A2BIE5
Length = 1150
Score = 868 (310.6 bits), Expect = 3.0e-89, Sum P(2) = 3.0e-89
Identities = 193/557 (34%), Positives = 302/557 (54%)
Query: 572 FAKSKTLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNG 631
F+K L +++ LPIF RD++++++R + G+TG GK+TQ+ QYLL G
Sbjct: 149 FSKLSKLRREQKSLPIFQYRDKIVELVRTHPVVVVAGDTGCGKSTQVPQYLLASGINN-- 206
Query: 632 IVGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETL 691
+ CTQPRR+A +S+AKRVS E + G KVGY IRFE +T + ++T+G+LLR+
Sbjct: 207 -IACTQPRRIACISLAKRVSFESLNQYGSKVGYQIRFETSRTLATKLLFLTEGLLLRQIQ 265
Query: 692 KDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGS 751
+D+ L +Y+V+++DE HER L D L G+L+ +++ R D +L++ SAT+N + FS +F
Sbjct: 266 QDASLGQYQVLIVDEVHERHLHCDFLLGVLRSLLSLRPDLRLVLMSATINIKLFSSYFND 325
Query: 752 VPIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQ--------AMTIHITSPP---GDILIFM 800
P+ +PGR FP+ +Y P E+ V + K I P GD+L+F+
Sbjct: 326 APVLQVPGRLFPIQVIYQPIPPEEQVSRSEKLDPRPYLRVLQGIDQRYPQEERGDLLLFL 385
Query: 801 TGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCI 860
+G EI ++E + + T R + +LP++S L Q K+F+ A G RKCI
Sbjct: 386 SGVAEIST----IQEACQTYATHTQRWI----VLPLHSTLSLAQQDKVFDIAPPGVRKCI 437
Query: 861 VATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXX 920
++TNIAETS+T+DG+ +V+D+G K ++PK M LQ F +S
Sbjct: 438 ISTNIAETSVTIDGVRFVVDSGKVKEMSFDPKAKMQRLQEFWISRASSEQRKGRAGRTGP 497
Query: 921 XXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILN 980
CYRLY+ES Y + P PVPEI R L +++ F F+DPPP +I
Sbjct: 498 GVCYRLYSESDY-DAFAPYPVPEIHRVALDSLILQMKSMGLGDPRTFTFIDPPPASSIQT 556
Query: 981 SMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPS 1040
++ L GAL+ G LT +G + + P+D + KML++G ++ VLT+ + LSV S
Sbjct: 557 AVTYLREQGALDEHGELTSIGRLLAQLPVDVVIGKMLVLGSVFNLVEPVLTVAAALSVQS 616
Query: 1041 VFFRPKDRAEESDAAREKFFVQESDHLTLLYVYQQWKEHQY-RGD----WCEEHYLHVKS 1095
F R + AR+ D TL+ + W + + RG WC L +
Sbjct: 617 PFLRSAQHNPDCSTARQPLNSNHGDPFTLMNTFNAWVQVKADRGSGSRKWCRRRGLEEQR 676
Query: 1096 LRKAREVRSQLLDILKT 1112
L + +R Q ++L++
Sbjct: 677 LYEMVNLRRQFKELLRS 693
Score = 42 (19.8 bits), Expect = 3.0e-89, Sum P(2) = 3.0e-89
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 171 ERKYLKDDTRSESRGPSRRDNYDSK 195
ER D R ES GP R++ D +
Sbjct: 110 ERLAGSDHRRRESSGPGRQEITDGR 134
>UNIPROTKB|P43329 [details] [associations]
symbol:hrpA species:83333 "Escherichia coli K-12"
[GO:0004386 "helicase activity" evidence=IEA;IMP] [GO:0009451 "RNA
modification" evidence=IMP] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0006397 "mRNA processing"
evidence=IMP] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006397 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:D42105
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GO:GO:0009451 PIR:H64892 RefSeq:NP_415931.4 RefSeq:YP_489680.1
ProteinModelPortal:P43329 SMR:P43329 DIP:DIP-9937N IntAct:P43329
MINT:MINT-1229564 PRIDE:P43329 EnsemblBacteria:EBESCT00000000014
EnsemblBacteria:EBESCT00000015011 GeneID:12932513 GeneID:948444
KEGG:ecj:Y75_p1389 KEGG:eco:b1413 PATRIC:32118112 EchoBASE:EB2772
EcoGene:EG12936 HOGENOM:HOG000247272 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 BioCyc:EcoCyc:G6732-MONOMER
BioCyc:ECOL316407:JW5905-MONOMER Genevestigator:P43329
InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967 Uniprot:P43329
Length = 1300
Score = 879 (314.5 bits), Expect = 2.0e-87, Sum P(2) = 2.0e-87
Identities = 220/634 (34%), Positives = 346/634 (54%)
Query: 585 LPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNGIVGCTQPRRVAAM 644
LP+ + ++L+ IR++Q GETGSGKTTQL + +E G G++G TQPRR+AA
Sbjct: 77 LPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAAR 136
Query: 645 SVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDSDLDKYRVIVM 704
+VA R++EE+ TE G +GY +RF D +T++K MTDG+LL E +D L +Y I++
Sbjct: 137 TVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIII 196
Query: 705 DEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPIFHIPGRTFPV 764
DEAHERSL+ D L G LK+++ RR D K+I+TSAT++ ++FS F + PI + GRT+PV
Sbjct: 197 DEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPV 256
Query: 765 NTLYSKTPCE-DYVEAAVKQAM--TIHITSPP--GDILIFMTGQDEIEAACFALKERMEQ 819
Y E D E QA+ + S GDILIFM+G+ EI AL +
Sbjct: 257 EVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTADALNK---- 312
Query: 820 LISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVI 879
++ E ILP+Y++L Q ++F+ + G R+ ++ATN+AETSLTV GI YVI
Sbjct: 313 -LNLRHTE-----ILPLYARLSNSEQNRVFQ-SHSG-RRIVLATNVAETSLTVPGIKYVI 364
Query: 880 DTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPS 939
D G ++ Y+ + + L + P+S C RLY+E +L+ P
Sbjct: 365 DPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSR--PE 422
Query: 940 PV-PEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNN---VG 995
PEI RTNL +V+ F F++ P + NI + + L LGA+
Sbjct: 423 FTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQAS 482
Query: 996 A--LTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESD 1053
A LT LG ++ + P+DP LA+M+L ++ GC+ E + I S LS+ RP D+ + SD
Sbjct: 483 AYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASD 542
Query: 1054 AAREKFFVQESDHLTLL----YVYQQWK---EHQYRGDWCEEHYLHVKSLRKAREVRSQL 1106
+F +ESD L + Y+ +Q K + +R C YL+ +R+ +++ +QL
Sbjct: 543 EKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRR-LCRTDYLNYLRVREWQDIYTQL 601
Query: 1107 LDILKTLKIPLTSSGHDFDVVRKAICSAYF-HNAARLKGVGEYINCRNGMPCHLHPSSAI 1165
++K L IP+ S ++ + A+ + H + EY RN + P S +
Sbjct: 602 RQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNAR-FSIFPGSGL 660
Query: 1166 YGLGYTPEYVVYHELILTTKEYMQCATAVEPQWL 1199
+ P++V+ EL+ T++ + + A ++P+W+
Sbjct: 661 FKK--PPKWVMVAELVETSRLWGRIAARIDPEWV 692
Score = 38 (18.4 bits), Expect = 2.0e-87, Sum P(2) = 2.0e-87
Identities = 8/26 (30%), Positives = 15/26 (57%)
Query: 467 LDGRIVFTKQAEPVMPIKDPTSDMAI 492
L R+ F+++ V +K+P + AI
Sbjct: 21 LRDRLRFSRRLHGVKKVKNPDAQQAI 46
>WB|WBGene00020263 [details] [associations]
symbol:T05E8.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0007413
"axonal fasciculation" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0006898 GO:GO:0040010
GO:GO:0040011 GO:GO:0003676 GO:GO:0040035 GO:GO:0007413
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GeneTree:ENSGT00700000104241 EMBL:FO080463 PIR:T29623
RefSeq:NP_491604.3 ProteinModelPortal:O01598 SMR:O01598
STRING:O01598 PaxDb:O01598 EnsemblMetazoa:T05E8.3 GeneID:172199
KEGG:cel:CELE_T05E8.3 UCSC:T05E8.3 CTD:172199 WormBase:T05E8.3
InParanoid:O01598 OMA:KEGCIME NextBio:874451 Uniprot:O01598
Length = 856
Score = 785 (281.4 bits), Expect = 8.8e-87, Sum P(2) = 8.8e-87
Identities = 190/508 (37%), Positives = 278/508 (54%)
Query: 582 RQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNGIVGCTQPRRV 641
R LPI +V +L+ + + GETGSGK+TQ+ Q + G +G + TQPRRV
Sbjct: 158 RPQLPIDAVEQQLMYELASQETLIVIGETGSGKSTQVPQLCVRAGIANSGSIAVTQPRRV 217
Query: 642 AAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDSDLDKYRV 701
AA+S+A RV+ EM T +G VGY +RFE+ T T I+YMTDG++LR+ L LDKY
Sbjct: 218 AAISLASRVATEMGTNIGGIVGYHVRFENATCHKTKIEYMTDGIVLRKALVSPLLDKYSC 277
Query: 702 IVMDEAHERSLSTDVLFGILKKVVARRRD----FKLIVTSATLNAQKFSDFFGSVPIFHI 757
+++DEAHERSL +DVL IL++ +RR+ +LI+ SATL A+KF +F + + +
Sbjct: 278 VIIDEAHERSLHSDVLMCILRQCQDQRRETNNPLRLIIMSATLQAEKFQSYFNNAKVVLV 337
Query: 758 PGRTFP-----VNTLYSKT-PCEDYVEAAVKQAMTIHITSPPG-DILIFMTGQDEIEAAC 810
GRTFP VN +K+ DYV AV +H+T P G DIL+F+TG +EIEA
Sbjct: 338 AGRTFPIEVFHVNPKINKSFSSTDYVYNAVICVKYVHLTEPKGRDILVFLTGSEEIEAVA 397
Query: 811 FALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSL 870
L E L +S +V L+ +P+Y+ L + Q + F K +G RK I++TNIAETS+
Sbjct: 398 SQLAELNGSLPASA--DV--LMPVPLYAALRPEKQKEAFRKTPQGARKVIISTNIAETSV 453
Query: 871 TVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTES 930
T+ GI VID+G K K + +D L+V VS CYRLY+
Sbjct: 454 TIPGIRVVIDSGKVKTKRFEAFNRIDVLKVHNVSKAQAKQRAGRAGRDAPGKCYRLYSRE 513
Query: 931 AYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGA 990
+ ++ +PEI R NL +DPP +NI ++ +L LGA
Sbjct: 514 DF-HKFEAENMPEILRCNLSATFLELMKLGMKNPHRLKLIDPPETDNINAALLELTSLGA 572
Query: 991 LNNVG------ALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFR 1044
+ V ALT++G +PL P A++L ++ GC+ E + IV+ + ++F
Sbjct: 573 IRPVNSDRSKFALTEMGDAFCMYPLPPDHARILFQAQKEGCIMEAIKIVAAMQTDALFSG 632
Query: 1045 PKDRAEESDA--AREKFFVQESDHLTLL 1070
D ++D R +F +E DH+TLL
Sbjct: 633 AGDSKSDADVDRIRRRFETREGDHITLL 660
Score = 113 (44.8 bits), Expect = 8.8e-87, Sum P(2) = 8.8e-87
Identities = 42/175 (24%), Positives = 78/175 (44%)
Query: 1030 LTIVSMLSVPSVFFRPKDRAEESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEH 1089
+T++ ++ V + FF ++ ESDA K + +L Y Q R +C ++
Sbjct: 657 ITLLKLVLVTNQFFDQLNKKTESDARYGKA------NKSLEREYNQ----TIR-KFCNDN 705
Query: 1090 YLHVKSLRKAREVRSQLLDILKTLKIPLTSSGHDFDVVRKAICSAYFHNAARL-KGVGEY 1148
++ + L+ A + QL I K+ ++ G DF +RKA+ F N+ + Y
Sbjct: 706 MINEQHLKTASMIEEQLKQIAIEQKVTFSTCGADFMKMRKALALGMFLNSCEYDRQEDRY 765
Query: 1149 -INCRNGMPCHLHPSSAIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSEL 1202
+ + +HPSS + P Y+V+ EL+ T + T ++ W+ L
Sbjct: 766 RLMINPAITLKIHPSSCLSRS--KPAYIVFSELMKTNDLFALQVTLIDGDWVRPL 818
>UNIPROTKB|F1NWM3 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:AADN02025787
IPI:IPI00583149 Ensembl:ENSGALT00000008234 Uniprot:F1NWM3
Length = 730
Score = 864 (309.2 bits), Expect = 2.0e-86, P = 2.0e-86
Identities = 182/424 (42%), Positives = 255/424 (60%)
Query: 585 LPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNGIVGCTQPRRVAAM 644
LPI R L++ + E GETGSGK+TQL +YL E G +G +G TQPRRVA +
Sbjct: 1 LPIRRHRRALVRAVSERPFLIVTGETGSGKSTQLPKYLYEAGLAQHGAIGVTQPRRVATI 60
Query: 645 SVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDSDLDKYRVIVM 704
SVA+RV+EEM LG VGY +RF+D + T IKYMTDG LLR L D L KY +I++
Sbjct: 61 SVAQRVAEEMGCALGSVVGYQVRFDDCSSEETAIKYMTDGCLLRHILADPLLSKYSIIIL 120
Query: 705 DEAHERSLSTDVLFGILKKVV------ARRRDFKLIVTSATLNAQKFSDFFGSVPIFHIP 758
DEAHERSLSTD+LFG+LKK+ R+ + K++V SATL K S+FFG + HIP
Sbjct: 121 DEAHERSLSTDILFGLLKKLFLQNKPPGRKTEMKVVVMSATLEVDKLSEFFGHCSVLHIP 180
Query: 759 GRTFPVNTLYSK------TPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFA 812
GR++PV ++ T YV AVK + IH+ P GDIL+F+TGQ EIE AC
Sbjct: 181 GRSYPVKEIFCNLLSPRDTGSSAYVTEAVKVTLDIHLNEPEGDILVFLTGQIEIEKACDL 240
Query: 813 LKERMEQL---ISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETS 869
L ++ E + R + LLILP+Y + D Q +IF A +G RKC+V+TNIA TS
Sbjct: 241 LFKKAESIDYRYEVHDRSIEGLLILPLYGSMSTDQQKRIFLPAPKGIRKCVVSTNIAATS 300
Query: 870 LTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTE 929
LT++G+ YV+D+G+ K +NP++G+D L+V P+S YRLY+
Sbjct: 301 LTIEGVRYVVDSGFVKQLNHNPRVGLDILEVVPISKSEAMQRAGRAGRTSSGKSYRLYS- 359
Query: 930 SAYLNEMLPS-PVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVL 988
+ + + +P VPEI+RT+L +V+ F ++D P + +IL ++ QL+
Sbjct: 360 TEFWEQCMPDHTVPEIKRTSLTSVILTLKCLSVHDVIRFPYLDRPEERHILEALKQLYQC 419
Query: 989 GALN 992
A++
Sbjct: 420 DAID 423
Score = 792 (283.9 bits), Expect = 3.2e-78, P = 3.2e-78
Identities = 179/546 (32%), Positives = 298/546 (54%)
Query: 717 LFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPIFHIPGRTFPVNTLYSK------ 770
LF + K R+ + K++V SATL K S+FFG + HIPGR++PV ++
Sbjct: 140 LF-LQNKPPGRKTEMKVVVMSATLEVDKLSEFFGHCSVLHIPGRSYPVKEIFCNLLSPRD 198
Query: 771 TPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQL---ISSTTRE 827
T YV AVK + IH+ P GDIL+F+TGQ EIE AC L ++ E + R
Sbjct: 199 TGSSAYVTEAVKVTLDIHLNEPEGDILVFLTGQIEIEKACDLLFKKAESIDYRYEVHDRS 258
Query: 828 VPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMK 887
+ LLILP+Y + D Q +IF A +G RKC+V+TNIA TSLT++G+ YV+D+G+ K
Sbjct: 259 IEGLLILPLYGSMSTDQQKRIFLPAPKGIRKCVVSTNIAATSLTIEGVRYVVDSGFVKQL 318
Query: 888 VYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPS-PVPEIQR 946
+NP++G+D L+V P+S YRLY+ + + + +P VPEI+R
Sbjct: 319 NHNPRVGLDILEVVPISKSEAMQRAGRAGRTSSGKSYRLYS-TEFWEQCMPDHTVPEIKR 377
Query: 947 TNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNV--GALTDLGWKM 1004
T+L +V+ F ++D P + +IL ++ QL+ A++ G +T LG +
Sbjct: 378 TSLTSVILTLKCLSVHDVIRFPYLDRPEERHILEALKQLYQCDAIDRTRRGHVTRLGEFL 437
Query: 1005 VEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKD--RAEESDAAREKFFVQ 1062
V+FPL P L+ ++ L C D +L I +MLSV +VF RP D + +E++ ++ Q
Sbjct: 438 VQFPLPPNLSCAVIKAASLDCEDMLLPIAAMLSVENVFIRPGDPQKQKEAELQHQELSSQ 497
Query: 1063 E---SDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQLLDILKTLK-IP-- 1116
+D TLL +++Q K + WC ++++H ++++ A V QL +I LK +P
Sbjct: 498 VGGCNDFATLLNIFEQCKASKSPSAWCHKYWIHWRAVKSALSVEKQLREITSKLKQLPDF 557
Query: 1117 --LTSSGHDFDVVRKAICSAYFHNAARLKGVGEYINCR-NGMPCHLHPSSAIYGLGYTPE 1173
T G +++R+ +C+ YF N AR + +G ++HPSS +Y E
Sbjct: 558 PKETFEGSRTELLRRCLCAGYFINVARRSAARTFCTMDGHGSIVYIHPSSTLYNQETRLE 617
Query: 1174 YVVYHELILTTKEYMQCATAVEPQWLSELGPMFFSVKDSDTSMLEHKKKQKESKTAMEEE 1233
++++H++ +T+K Y++ V +W+ +L P + + S + ++ +E T + +
Sbjct: 618 WIIFHDVTVTSKIYVRTVCPVRYEWVKDLLPRLHQIDAYELSSVAREEVTEEEITRWKHK 677
Query: 1234 MENLRK 1239
E+LR+
Sbjct: 678 -EDLRR 682
>UNIPROTKB|B0V0F8 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR002464 InterPro:IPR011545
Pfam:PF00270 PROSITE:PS00690 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HOVERGEN:HBG039428 HGNC:HGNC:2739 OrthoDB:EOG4VHK5Q EMBL:CR759873
IPI:IPI00894081 SMR:B0V0F8 Ensembl:ENST00000450902 Uniprot:B0V0F8
Length = 669
Score = 820 (293.7 bits), Expect = 1.1e-85, Sum P(2) = 1.1e-85
Identities = 169/359 (47%), Positives = 231/359 (64%)
Query: 504 IREKQTQNKSRQRFWELAGSQMGNI-LGVKKTAEQVDADTAVVGEQGEIDF-REDAKFSQ 561
+ E+ QR WE A ++ G + A Q V+ E+ I+F R
Sbjct: 315 VEEESGAPGEEQRRWEEARLGAASLKFGARDAASQEPKYQLVLEEEETIEFVRATQLQGD 374
Query: 562 HMKKGEAVSDFAKSK-TLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQ 620
S A+ K ++ R+ LP+F R+ELL I +Q GETGSGKTTQ+ Q
Sbjct: 375 EEPSAPPTSTQAQQKESIQAVRRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQ 434
Query: 621 YLLEDGYTTNGI-VGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIK 679
YL E+GYT G+ + CTQPRRVAAMSVA RV+ EM +LG++VGY+IRFED T T+++
Sbjct: 435 YLFEEGYTNKGMKIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLR 494
Query: 680 YMTDGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSAT 739
YMTDG+LLRE L + DL Y V+++DEAHER+L TD+LFG++K V R + K++V SAT
Sbjct: 495 YMTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASAT 554
Query: 740 LNAQKFSDFFGSVPIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIF 799
++ +FS FF P+F IPGR FPV+ Y+K P DY+EA V + IH+T PPGDIL+F
Sbjct: 555 MDTARFSTFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVF 614
Query: 800 MTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRK 858
+TGQ+EIEAAC L++R +L S ++ ELL+LPIY+ LP+D+QA+IF+ G RK
Sbjct: 615 LTGQEEIEAACEMLQDRCRRLGS----KIRELLVLPIYANLPSDMQARIFQPTPPGARK 669
Score = 64 (27.6 bits), Expect = 1.1e-85, Sum P(2) = 1.1e-85
Identities = 21/83 (25%), Positives = 39/83 (46%)
Query: 167 DRGSERKYLKDDTRSESRGPSRRDNYDSKGRYRG---REARDRDEPEYGGEYGRKRSKYD 223
++ + L+D S SR + K R + R+ R+ +E E E G+K++
Sbjct: 92 EKNRSYRLLEDSEESSEETVSRAGSSLQKKRKKRKHLRKKREEEEEEEASEKGKKKT--G 149
Query: 224 GTRRTPGRSDWDDGRWEWEDTPR 246
G+++ + + +D EWE T R
Sbjct: 150 GSKQQTEKPESED---EWERTER 169
Score = 55 (24.4 bits), Expect = 9.9e-85, Sum P(2) = 9.9e-85
Identities = 19/71 (26%), Positives = 33/71 (46%)
Query: 164 DRDDRGSER-KYLKDDTRSESRGPSRRDNYDSKGRYRGREARDRDEPEYGGEYGRKRSKY 222
+ ++ SE+ K ++ ++ P D ++ R R ++ +RD E R+R K
Sbjct: 135 EEEEEASEKGKKKTGGSKQQTEKPESEDEWERTERERLQDLEERDA---FAERVRQRDK- 190
Query: 223 DGTRRTPGRSD 233
D TR RSD
Sbjct: 191 DRTRNVLERSD 201
Score = 46 (21.3 bits), Expect = 8.8e-84, Sum P(2) = 8.8e-84
Identities = 13/51 (25%), Positives = 28/51 (54%)
Query: 493 ISRKGSALVREIREKQTQNKSRQRFWELAGSQMGNIL--GVKKTAEQVDAD 541
+SR GS+L ++ ++++ K R+ E S+ G G K+ E+ +++
Sbjct: 111 VSRAGSSLQKKRKKRKHLRKKREEEEEEEASEKGKKKTGGSKQQTEKPESE 161
>UNIPROTKB|H9KZI9 [details] [associations]
symbol:LOC100858239 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00575 PROSITE:PS00690
PROSITE:PS50126 GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
GeneTree:ENSGT00700000104241 EMBL:AADN02006936
Ensembl:ENSGALT00000013764 OMA:CRERERG Uniprot:H9KZI9
Length = 692
Score = 812 (290.9 bits), Expect = 1.8e-85, Sum P(2) = 1.8e-85
Identities = 179/402 (44%), Positives = 252/402 (62%)
Query: 413 QSKKLSQITADNHQWEERQLLRSGAVRGTE---------LSTEFDDEEEHKVILLVHDTK 463
+ K+L++I+ D +WE +Q++ + + E + + DDEE+ + + + + +
Sbjct: 297 ERKRLTRIS-DPEKWEIKQMIAANVLSKEEFPDFDEETGILPKVDDEEDEDLEIELVEEE 355
Query: 464 PPFLDGRIVFTKQAEPVMPIKDPTSDMAIISRKGSALVREIREKQTQNKSRQRFWELAGS 523
PPFL G + P+ +K+P ++ + SAL +E RE K QR E+
Sbjct: 356 PPFLRGHTKQSMDMSPIKIVKNPDGSLSQAAMMQSALAKERREL----KQAQREAEMDSI 411
Query: 524 QMG-NILGVKKTAEQVDADTAVVGEQGEIDFREDA-KFSQHMKKGEAVSDFAKSK-TLAE 580
MG N V + VD +G D ++ +H G S K++ ++ E
Sbjct: 412 PMGLNTHWVDPLPD-VDGRQIAANMRGIGMMPNDIPEWKKHAFGGNKASYGKKTQLSIIE 470
Query: 581 QRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNGIVGCTQPRR 640
QR+ LPIF ++++L+Q + +NQ GETGSGKTTQ+TQYL E GYT+ G +GCTQPRR
Sbjct: 471 QRESLPIFRLKEQLIQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIGCTQPRR 530
Query: 641 VAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDSDLDKYR 700
VAAMSVAKRVSEE LG +VGY IRFED T P T+IKYMTDG+LLRE L D DL +Y
Sbjct: 531 VAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQYA 590
Query: 701 VIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPIFHIPGR 760
+I++DEAHER++ TDVLFG+LKK V +R+D KLIVTSATL+A KFS +F PIF IPGR
Sbjct: 591 IIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGR 650
Query: 761 TFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTG 802
T+PV LY+K P DY++A++ M IH+T PPG+ ++ + G
Sbjct: 651 TYPVEILYTKEPETDYLDASLITVMQIHLTEPPGEWIVMIHG 692
Score = 71 (30.1 bits), Expect = 1.8e-85, Sum P(2) = 1.8e-85
Identities = 22/59 (37%), Positives = 28/59 (47%)
Query: 165 RD-DRGSERKYLKDDTRSESRGPSRRDNYDSKGRYRGREAR-DR---DEPEYGGEYGRK 218
RD +RG R Y + +RS SR RD Y + R R+ DR +EP G Y K
Sbjct: 123 RDRNRGKSRYYSRSRSRSPSRDRRDRDKYLERSNERWRDKHVDRPPPEEPSIGDIYNGK 181
Score = 67 (28.6 bits), Expect = 4.8e-85, Sum P(2) = 4.8e-85
Identities = 29/107 (27%), Positives = 44/107 (41%)
Query: 162 RHDRDDRGSERKYLKDDTRSESRGPSRRDNYDSKGRYRGREARDRDEPEYGGEYGRKRSK 221
R + R K +RS SR RR S+ R R R+ R+R + Y Y R RS
Sbjct: 84 RQGKQKNSDHRAKKKRRSRSRSRDRKRRHRSRSRSRSRTRD-RNRGKSRY---YSRSRS- 138
Query: 222 YDGTRRTPGRSDWDDGRWEWEDTPR-REGYSNSSKRYQPSPSPMFVG 267
R+P R D ++ R R+ + + +PS ++ G
Sbjct: 139 -----RSPSRDRRDRDKYLERSNERWRDKHVDRPPPEEPSIGDIYNG 180
>MGI|MGI:2141813 [details] [associations]
symbol:Dhx32 "DEAH (Asp-Glu-Ala-His) box polypeptide 32"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR007502 Pfam:PF04408 PROSITE:PS51194 SMART:SM00847
MGI:MGI:2141813 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0004386 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 HOGENOM:HOG000175261 GeneTree:ENSGT00650000093246
HOVERGEN:HBG039428 CTD:55760 OMA:LACEQDI OrthoDB:EOG4N30NF
ChiTaRS:DHX32 EMBL:AY065980 EMBL:AK033624 EMBL:AK169005
EMBL:AK172504 EMBL:BC006911 EMBL:BC022920 IPI:IPI00127679
IPI:IPI00830523 RefSeq:NP_598702.1 UniGene:Mm.199223
ProteinModelPortal:Q8BZS9 SMR:Q8BZS9 PaxDb:Q8BZS9 PRIDE:Q8BZS9
Ensembl:ENSMUST00000033290 Ensembl:ENSMUST00000063669 GeneID:101437
KEGG:mmu:101437 UCSC:uc009kdj.1 InParanoid:Q8BZS9 NextBio:354922
Bgee:Q8BZS9 CleanEx:MM_DHX32 Genevestigator:Q8BZS9 Uniprot:Q8BZS9
Length = 744
Score = 852 (305.0 bits), Expect = 4.9e-85, P = 4.9e-85
Identities = 199/650 (30%), Positives = 344/650 (52%)
Query: 578 LAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQ----YLLEDGYTTNGIV 633
L ++R+ LPI+ + ++ + +NQ G++ GK++Q+ Q Y L Y G++
Sbjct: 55 LLKEREELPIWKEKYSFMESLLQNQVVVVSGDSKCGKSSQVPQWCAEYCLSIHYQHGGVI 114
Query: 634 GCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKD 693
CTQ + A+ +A RV++EMD +G +VGY I FE+ T+++Y TD +L RE + +
Sbjct: 115 -CTQAHKQTAVQLALRVADEMDVNIGHEVGYVIPFENCCTTETILRYCTDDMLQREMMSN 173
Query: 694 SDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVP 753
L Y VI++D+ HERSL+TDVL G+LK V+ R + KLIV + L K S ++G VP
Sbjct: 174 PFLGSYGVIILDDVHERSLATDVLLGLLKDVLLARPELKLIVNCSPLLTSKLSSYYGDVP 233
Query: 754 IFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFAL 813
+ + + PV +Y +D E+ ++ IH + GD+++F+ + +IE
Sbjct: 234 VIEVRNK-HPVEVVYLSGAQKDSFESVIRLIFEIHRSGEKGDVVVFLACEQDIEKTY--- 289
Query: 814 KERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGT---RKCIVATNIAETSL 870
E + Q S+ +V +L+++P+Y + L + E K R+ ++ T+ E+ +
Sbjct: 290 -ELVCQEGSNLNPDVGDLVVIPLYPKEKCSLFRPVDETEKRCQVYQRRVVLTTSCGESLI 348
Query: 871 TVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTES 930
+ +VID G + +VYNP++ ++L + P+S + LYTE
Sbjct: 349 WSHTVKFVIDVGLERRQVYNPRIRANSLVLQPISQSQAEIRKQLLGSSPSGKLFCLYTEE 408
Query: 931 AYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGA 990
+M P E+Q NL ++V DFM+ P E+++ ++ L L A
Sbjct: 409 FASKDMRPLKPAEMQEANLTSMVLFMKRVDIAGLGRCDFMNRPAPESLMQALEDLDYLAA 468
Query: 991 LNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAE 1050
L+N G L++ G M EFPLDP L+K +L + C+DE+LTI +M++ PS F AE
Sbjct: 469 LDNDGNLSEFGIIMSEFPLDPQLSKSILASCEFDCVDEMLTIAAMVTAPSCFLHVPHGAE 528
Query: 1051 ESDAAREKFFVQ-ESDHLTLLYVYQQWKE------HQYRGD-WCEEHYLHVKSLRKAREV 1102
E+ K F+ E DH TL+ VY +++ +++ + WC + +L +LR A +
Sbjct: 529 EAAVTCWKTFLHPEGDHFTLINVYNAYQDTVLNSANEHCVEMWCHDCFLSCSALRMADVI 588
Query: 1103 RSQLLDILKTLKIPLTS----SGHDFDVVRKAICSAYFHNAAR-LKGVGEYINCRNGMPC 1157
R++LL+I+K +++P S + ++KA+ S YF AR + G G Y+ +
Sbjct: 589 RAELLEIIKRIELPYAEPAFGSKENGLNIKKALLSGYFMQIARDVDGSGNYLMLTHKQVA 648
Query: 1158 HLHPSSAIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFF 1207
LHP S+ PE+V++H+ ++ Y++ A+AV P+ +L P ++
Sbjct: 649 QLHPLSSYSITKKMPEWVLFHQFSISENNYIRVASAVSPELFMQLVPQYY 698
>UNIPROTKB|Q14147 [details] [associations]
symbol:DHX34 "Probable ATP-dependent RNA helicase DHX34"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00355
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0008270
GO:GO:0003723 GO:GO:0005622 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:D50924 EMBL:AC008754 EMBL:AK297692
IPI:IPI00382739 RefSeq:NP_055496.2 UniGene:Hs.151706
ProteinModelPortal:Q14147 SMR:Q14147 IntAct:Q14147
PhosphoSite:Q14147 DMDM:311033371 PaxDb:Q14147 PRIDE:Q14147
DNASU:9704 Ensembl:ENST00000328771 GeneID:9704 KEGG:hsa:9704
UCSC:uc010xyn.2 CTD:9704 GeneCards:GC19P047853 HGNC:HGNC:16719
HPA:HPA042159 HPA:HPA043558 neXtProt:NX_Q14147 PharmGKB:PA27221
HOGENOM:HOG000232193 OMA:DSDQVFH OrthoDB:EOG4GB75B PhylomeDB:Q14147
ChiTaRS:DHX34 GenomeRNAi:9704 NextBio:36469 Bgee:Q14147
CleanEx:HS_DHX34 Genevestigator:Q14147 GermOnline:ENSG00000134815
Uniprot:Q14147
Length = 1143
Score = 847 (303.2 bits), Expect = 1.9e-84, P = 1.9e-84
Identities = 196/556 (35%), Positives = 297/556 (53%)
Query: 572 FAKSKTLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNG 631
F + L +R LPI + +LQ ++E+Q G+TG GK+TQ+ QYLL G++
Sbjct: 149 FGRLAKLQRERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSH-- 206
Query: 632 IVGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETL 691
V CTQPRR+A +S+AKRV E ++ G +VGY IRFE +T I ++T G+LLR+
Sbjct: 207 -VACTQPRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRQIQ 265
Query: 692 KDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGS 751
++ L +Y V+++DE HER L D L G+L++++ R D K+I+ SAT+N FS +F +
Sbjct: 266 REPSLPQYEVLIVDEVHERHLHNDFLLGVLQRLLPTRPDLKVILMSATINISLFSSYFSN 325
Query: 752 VPIFHIPGRTFPVNTLYSKTPCEDYVEAAVK-------QAM-TIHITSPP---GDILIFM 800
P+ +PGR FP+ +Y E + K + + +I PP GD+L+F+
Sbjct: 326 APVVQVPGRLFPITVVYQPQEAEPTTSKSEKLDPRPFLRVLESIDHKYPPEERGDLLVFL 385
Query: 801 TGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCI 860
+G EI A E + S T R V +LP++S L Q K+F+ A G RKCI
Sbjct: 386 SGMAEISAVL----EAAQTYASHTQRWV----VLPLHSALSVADQDKVFDVAPPGVRKCI 437
Query: 861 VATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXX 920
++TNIAETS+T+DGI +V+D+G K Y+P+ + LQ F +S
Sbjct: 438 LSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAGRTGP 497
Query: 921 XXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILN 980
C+RLY ES Y + P PVPEI+R L ++V F F++PPP ++
Sbjct: 498 GVCFRLYAESDY-DAFAPYPVPEIRRVALDSLVLQMKSMSVGDPRTFPFIEPPPPASLET 556
Query: 981 SMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPS 1040
++ L GAL++ ALT +G + + P+D + KML++G ++ VLTI + LSV S
Sbjct: 557 AILYLRDQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFSLVEPVLTIAAALSVQS 616
Query: 1041 VFFRPKDRAEESDAAREKFFVQESDHLTLLYVYQQW---KEHQYRGD--WCEEHYLHVKS 1095
F R + E AAR + D TL V+ W K + R WC +
Sbjct: 617 PFTRSAQSSPECAAARRPLESDQGDPFTLFNVFNAWVQVKSERSRNSRKWCRRRGIEEHR 676
Query: 1096 LRKAREVRSQLLDILK 1111
L + +R Q ++L+
Sbjct: 677 LYEMANLRRQFKELLE 692
>UNIPROTKB|E2RTK4 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00355 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AAEX03000836
Ensembl:ENSCAFT00000006692 Uniprot:E2RTK4
Length = 1140
Score = 846 (302.9 bits), Expect = 2.5e-84, P = 2.5e-84
Identities = 197/556 (35%), Positives = 297/556 (53%)
Query: 572 FAKSKTLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNG 631
F + L +R LPI + +LQ ++E+Q G+TG GK+TQ+ QYLL G++
Sbjct: 148 FGRLAKLQHERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSH-- 205
Query: 632 IVGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETL 691
V CTQPRR+A +S+AKRVS E ++ G +VGY IRFE +T I ++T G+LLR+
Sbjct: 206 -VACTQPRRIACISLAKRVSFESLSQYGSQVGYQIRFESTRTAATKIVFLTVGLLLRQIQ 264
Query: 692 KDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGS 751
++ L +Y+V+++DE HER L D L G+L++++ +R D K+I+ SAT+N FS +FG+
Sbjct: 265 REPSLPQYQVLIVDEVHERHLHNDFLLGVLRRLLPKRPDLKVILMSATINISLFSSYFGT 324
Query: 752 VPIFHIPGRTFPVNTLYSKTPCEDYVEAAVK-------QAM-TIHITSPP---GDILIFM 800
P+ +PGR FP+ +Y E + K + + I PP GD+L+F+
Sbjct: 325 APVVQVPGRLFPITVVYQPQEAEPVASKSEKLDPGPFLRVLEAIDNKYPPEERGDLLVFL 384
Query: 801 TGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCI 860
+G EI + E + S T R V +LP++S L Q K+F+ A G RKCI
Sbjct: 385 SGMAEISSVL----EAAQTYASRTQRWV----VLPLHSALSVADQDKVFDVAPPGVRKCI 436
Query: 861 VATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXX 920
++TNIAETS+T+DGI +V+D+G K Y+P+ + LQ F +S
Sbjct: 437 LSTNIAETSVTIDGIRFVVDSGKVKEMGYDPQAKLHRLQEFWISQASAEQRKGRAGRTGP 496
Query: 921 XXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILN 980
C+RLY ES Y + P PVPEI+R L +V F F++PPP ++
Sbjct: 497 GVCFRLYAESDY-DAFAPYPVPEIRRVALDALVLQMKSMSVGDPRTFPFIEPPPPASLET 555
Query: 981 SMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPS 1040
++ L GAL++ ALT +G + + P+D + KML++G + VLTI + LSV S
Sbjct: 556 AILYLQDQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFHLAEPVLTIAAALSVQS 615
Query: 1041 VFFRPKDRAEESDAAREKFFVQESDHLTLLYVYQQW---KEHQYRGD--WCEEHYLHVKS 1095
F R E AAR + D TL V+ W K + R WC +
Sbjct: 616 PFTRSAQSNPECAAARRPLESDQGDPFTLFNVFNAWVQVKSERSRNSRKWCRHRGIEEHR 675
Query: 1096 LRKAREVRSQLLDILK 1111
L + +R Q ++L+
Sbjct: 676 LYEMANLRRQFKELLE 691
>RGD|1311740 [details] [associations]
symbol:Dhx32 "DEAH (Asp-Glu-Ala-His) box polypeptide 32"
species:10116 "Rattus norvegicus" [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR007502 Pfam:PF04408 SMART:SM00847
RGD:1311740 GO:GO:0004386 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00650000093246 CTD:55760 OMA:LACEQDI
OrthoDB:EOG4N30NF EMBL:CH473953 IPI:IPI00366073
RefSeq:NP_001123511.1 UniGene:Rn.162500 Ensembl:ENSRNOT00000024655
GeneID:361667 KEGG:rno:361667 UCSC:RGD:1311740 NextBio:677165
Uniprot:D3ZGJ0
Length = 751
Score = 846 (302.9 bits), Expect = 2.5e-84, P = 2.5e-84
Identities = 201/681 (29%), Positives = 351/681 (51%)
Query: 578 LAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQ----YLLEDGYTTNGIV 633
L ++R+ LPI+ + ++ + +NQ G++ GK++Q+ Q Y L Y G++
Sbjct: 62 LLKEREELPIWKEKYSFMESLLQNQVVLVSGDSKCGKSSQVPQWCAEYCLSIHYQHGGVI 121
Query: 634 GCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKD 693
CTQ + A+ +A RV++EMD +G +VGY I FE+ T+++Y TD +L RE + +
Sbjct: 122 -CTQVHKQTAVQLALRVADEMDVNIGHEVGYVIPFENCCTTETILRYCTDDMLQREMMSN 180
Query: 694 SDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVP 753
L Y VI++D+ HERSL+TDVL G+LK V+ R + KLI+ + + S ++G+VP
Sbjct: 181 PFLGSYGVIILDDVHERSLATDVLLGLLKDVLLARPELKLIINCSPFLISRLSSYYGNVP 240
Query: 754 IFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFAL 813
+ + + PV +Y +D E+ V+ IH + GD+++F+ + +IE
Sbjct: 241 LLEVRNK-HPVEVVYLSGAQKDPFESVVRLIFEIHRSGEQGDVVVFLACEQDIEKTY--- 296
Query: 814 KERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKE---GTRKCIVATNIAETSL 870
E + Q S+ +V EL+++P+Y + L + E K R+ ++ T+ E+ +
Sbjct: 297 -EIVCQEGSNLNPDVGELVVIPLYPKEKCSLFRPVDETEKRCQASQRRVVLTTSCGESLI 355
Query: 871 TVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTES 930
+ +VID G + +VYNP++ ++L + P+S + LYTE
Sbjct: 356 WSHTVRFVIDVGLERRQVYNPRIRANSLVLQPISQSQAEIRKQLLGSSPSGKLFCLYTEE 415
Query: 931 AYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGA 990
+M P E+Q NL ++V DFM+ P E+++ ++ L L A
Sbjct: 416 FASKDMRPLKPAEMQEANLTSMVLFMKRVDIAGLGRCDFMNRPAPESLMQALEDLDYLAA 475
Query: 991 LNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAE 1050
L+N G L++ G M EFPLDP L+K +L + C+DE+LTI +M++ PS F AE
Sbjct: 476 LDNDGNLSEFGIIMSEFPLDPQLSKSILASCEFDCVDEMLTIAAMVTAPSCFLHVPHGAE 535
Query: 1051 ESDAAREKFFVQ-ESDHLTLLYVYQQWK--------EHQYRGDWCEEHYLHVKSLRKARE 1101
E+ K F+ E DH TL+ +Y ++ EH WC +L +LR A
Sbjct: 536 EAAVTCWKTFLHPEGDHFTLINIYNAYQDTVLNSANEHCVE-TWCHNCFLSCSALRMADV 594
Query: 1102 VRSQLLDILKTLKIPLTSSGHDFDV----VRKAICSAYFHNAAR-LKGVGEYINCRNGMP 1156
+R++LL+I+K +++P ++KA+ S YF AR + G G Y+ +
Sbjct: 595 IRAELLEIIKRIELPYAEPAFGSQENGLNIKKALLSGYFMQIARDVDGSGNYLMLTHKQV 654
Query: 1157 CHLHPSSAIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFF--SVKDSDT 1214
LHP S+ PE+V++H+ ++ Y++ +AV P+ +L P ++ ++ S++
Sbjct: 655 AQLHPLSSYAITKKMPEWVLFHQFSISENNYIRVTSAVSPELFMQLVPQYYFSNLPPSES 714
Query: 1215 SMLEHKKKQKESKTAMEEEME 1235
+ + TAM+++ +
Sbjct: 715 KDILQQASGHLPTTAMDKDQD 735
>UNIPROTKB|Q7L7V1 [details] [associations]
symbol:DHX32 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX32" species:9606 "Homo sapiens"
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR007502
Pfam:PF04408 PROSITE:PS51194 SMART:SM00847 GO:GO:0005739
GO:GO:0005524 GO:GO:0005634 EMBL:CH471066 GO:GO:0004386
InterPro:IPR014001 PROSITE:PS51192 EMBL:AY064247 EMBL:AL360176
UniGene:Hs.370292 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
HOVERGEN:HBG039428 EMBL:AF427340 EMBL:AF427341 EMBL:AY064250
EMBL:AK001556 EMBL:AK001751 EMBL:AK024869 EMBL:BC002473
EMBL:BC037925 EMBL:BC068471 EMBL:AL162051 IPI:IPI00334601
IPI:IPI00644447 PIR:T47184 RefSeq:NP_060650.2
ProteinModelPortal:Q7L7V1 SMR:Q7L7V1 IntAct:Q7L7V1 STRING:Q7L7V1
PhosphoSite:Q7L7V1 DMDM:74759011 PRIDE:Q7L7V1 DNASU:55760
Ensembl:ENST00000284688 Ensembl:ENST00000284690
Ensembl:ENST00000368721 Ensembl:ENST00000415732 GeneID:55760
KEGG:hsa:55760 UCSC:uc001lje.1 UCSC:uc001ljf.1 CTD:55760
GeneCards:GC10M127515 HGNC:HGNC:16717 HPA:HPA048872 MIM:607960
neXtProt:NX_Q7L7V1 PharmGKB:PA27219 InParanoid:Q7L7V1 OMA:LACEQDI
OrthoDB:EOG4N30NF PhylomeDB:Q7L7V1 ChiTaRS:DHX32 GenomeRNAi:55760
NextBio:60779 Bgee:Q7L7V1 Genevestigator:Q7L7V1 Uniprot:Q7L7V1
Length = 743
Score = 841 (301.1 bits), Expect = 9.6e-84, P = 9.6e-84
Identities = 195/650 (30%), Positives = 342/650 (52%)
Query: 578 LAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQ----YLLEDGYTTNGIV 633
L ++R+ LPI+ + ++ + +NQ G+ GK+ Q+ Q Y L Y G++
Sbjct: 55 LLKEREDLPIWKEKYSFMENLLQNQIVIVSGDAKCGKSAQVPQWCAEYCLSIHYQHGGVI 114
Query: 634 GCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKD 693
CTQ + + +A RV++EMD +G +VGY I FE+ T+++Y TD +L RE + +
Sbjct: 115 -CTQVHKQTVVQLALRVADEMDVNIGHEVGYVIPFENCCTNETILRYCTDDMLQREMMSN 173
Query: 694 SDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVP 753
L Y VI++D+ HERS++TDVL G+LK V+ R + KLI+ S+ K + ++G+VP
Sbjct: 174 PFLGSYGVIILDDIHERSIATDVLLGLLKDVLLARPELKLIINSSPHLISKLNSYYGNVP 233
Query: 754 IFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFAL 813
+ + + PV +Y +D E+ ++ IH + GDI++F+ + +IE C
Sbjct: 234 VIEVKNK-HPVEVVYLSEAQKDSFESILRLIFEIHHSGEKGDIVVFLACEQDIEKVC--- 289
Query: 814 KERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGT---RKCIVATNIAETSL 870
E + Q S+ ++ EL+++P+Y + L + E K R+ ++ T+ E +
Sbjct: 290 -ETVYQG-SNLNPDLGELVVVPLYPKEKCSLFKPLDETEKRCQVYQRRVVLTTSSGEFLI 347
Query: 871 TVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTES 930
+ + +VID G + KVYNP++ ++L + P+S + LYTE
Sbjct: 348 WSNSVRFVIDVGVERRKVYNPRIRANSLVMQPISQSQAEIRKQILGSSSSGKFFCLYTEE 407
Query: 931 AYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGA 990
+M P E+Q NL ++V DFM+ P E+++ ++ L L A
Sbjct: 408 FASKDMTPLKPAEMQEANLTSMVLFMKRIDIAGLGHCDFMNRPAPESLMQALEDLDYLAA 467
Query: 991 LNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAE 1050
L+N G L++ G M EFPLDP L+K +L + C+DEVLTI +M++ P+ F AE
Sbjct: 468 LDNDGNLSEFGIIMSEFPLDPQLSKSILASCEFDCVDEVLTIAAMVTAPNCFSHVPHGAE 527
Query: 1051 ESDAAREKFFVQ-ESDHLTLLYVYQQWKE------HQYRGD-WCEEHYLHVKSLRKAREV 1102
E+ K F+ E DH TL+ +Y+ +++ +Y + WC +++L+ +LR A +
Sbjct: 528 EAALTCWKTFLHPEGDHFTLISIYKAYQDTTLNSSSEYCVEKWCRDYFLNCSALRMADVI 587
Query: 1103 RSQLLDILKTLKIPLTSS--GHDFDV--VRKAICSAYFHNAAR-LKGVGEYINCRNGMPC 1157
R++LL+I+K +++P G + ++KA+ S YF AR + G G Y+ +
Sbjct: 588 RAELLEIIKRIELPYAEPAFGSKENTLNIKKALLSGYFMQIARDVDGSGNYLMLTHKQVA 647
Query: 1158 HLHPSSAIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFF 1207
LHP S PE+V++H+ ++ Y++ + + P+ +L P ++
Sbjct: 648 QLHPLSGYSITKKMPEWVLFHKFSISENNYIRITSEISPELFMQLVPQYY 697
>UNIPROTKB|A7MBI4 [details] [associations]
symbol:DHX32 "DHX32 protein" species:9913 "Bos taurus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR007502 Pfam:PF04408
SMART:SM00847 GO:GO:0005524 GO:GO:0004386 InterPro:IPR014001
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
HOGENOM:HOG000175261 GeneTree:ENSGT00650000093246
HOVERGEN:HBG039428 CTD:55760 OMA:LACEQDI OrthoDB:EOG4N30NF
EMBL:DAAA02059534 EMBL:DAAA02059535 EMBL:DAAA02059536 EMBL:BC151578
IPI:IPI00715161 RefSeq:NP_001094614.1 UniGene:Bt.44006
Ensembl:ENSBTAT00000007619 GeneID:532978 KEGG:bta:532978
InParanoid:A7MBI4 NextBio:20875863 Uniprot:A7MBI4
Length = 744
Score = 835 (299.0 bits), Expect = 4.8e-83, P = 4.8e-83
Identities = 194/654 (29%), Positives = 345/654 (52%)
Query: 578 LAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQ----YLLEDGYTTNGIV 633
L ++R+ LPI+ + ++ + ++Q G+ GK++Q+ Q Y L Y G+V
Sbjct: 55 LLKEREDLPIWKEKYSFMEKLLQSQIVIVSGDAKCGKSSQVPQWCAEYCLSIDYRHGGVV 114
Query: 634 GCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKD 693
CTQ + A+ +A RV++EMD +G +VGY I FE+ T+++Y TD +L RE + +
Sbjct: 115 -CTQVHKPTAVQLALRVADEMDVNIGHEVGYVIPFENCCTSETILRYCTDDMLQREMMSN 173
Query: 694 SDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVP 753
L Y VI++D+ HERS++TDVL G+LK V+ R + KLI+ S+ K S ++G+VP
Sbjct: 174 PFLGSYGVIILDDIHERSMATDVLLGLLKDVLLARPELKLIINSSPHLINKLSSYYGNVP 233
Query: 754 IFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFAL 813
+ + + PV +Y ++ E+ ++ IH + GDI++F+ + +IE A
Sbjct: 234 LIQVKNK-HPVEAVYLSGAQKESFESILRLIFEIHHSGEKGDIVVFLACEQDIEKAY--- 289
Query: 814 KERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKC-------IVATNIA 866
E + Q S+ ++ EL+++P+Y P + + +F+ E ++C ++ +
Sbjct: 290 -EIVCQEGSNLNPDLGELVVVPLY---PKE-KCALFKPNDETEKRCPVYQRRVVLTASSG 344
Query: 867 ETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRL 926
E+ + + + +VID G + KVYNP++ D+L P+S + L
Sbjct: 345 ESLICSNTVKFVIDVGVERRKVYNPRIRADSLVTQPISQSQAETRKQILSASPSGKLFCL 404
Query: 927 YTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLW 986
Y+E +M P E+Q NL ++V DFM+ P E+++ ++ L
Sbjct: 405 YSEEFASRDMQPLKPAEMQEANLTSMVLFMKRVDIAGLGHCDFMNRPAPESLMQALEDLD 464
Query: 987 VLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPK 1046
L AL+N G L++ G M EFPLDP L+K +L + C+DE+LTI +M++ P+ F
Sbjct: 465 YLAALDNDGNLSEFGIIMSEFPLDPQLSKSILASCEFDCVDEMLTIAAMVTAPNCFSHLP 524
Query: 1047 DRAEESDAAREKFFVQ-ESDHLTLLYVYQQWKEHQYRG-------DWCEEHYLHVKSLRK 1098
AEE+ + K F+ + DH TL+ +Y+ +++ WC +++L+ +LR
Sbjct: 525 RGAEEAALSCWKTFLHPDGDHFTLINIYKAYQDMTLNAASEHCVEKWCHDYFLNCSALRT 584
Query: 1099 AREVRSQLLDILKTLKIPLTSS--GHDFDV--VRKAICSAYFHNAAR-LKGVGEYINCRN 1153
A +R++LL+I+K +++P T G + ++KA+ S YF AR + G G Y+ +
Sbjct: 585 AEVIRAELLEIIKRIELPYTEPAFGSKENTLNIKKALLSGYFMQIARDVDGAGNYLMLTH 644
Query: 1154 GMPCHLHPSSAIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFF 1207
LHP S PE+V++H+ + Y++ A+ + P+ +L P ++
Sbjct: 645 KQVAQLHPLSCYSVARKMPEWVLFHKFSIANNNYIRTASEIAPELFMQLAPQYY 698
>UNIPROTKB|E2RTK2 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00355 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 OMA:DSDQVFH
GeneTree:ENSGT00700000104421 EMBL:AAEX03000836
Ensembl:ENSCAFT00000006694 Uniprot:E2RTK2
Length = 1177
Score = 846 (302.9 bits), Expect = 7.6e-83, P = 7.6e-83
Identities = 197/556 (35%), Positives = 297/556 (53%)
Query: 572 FAKSKTLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNG 631
F + L +R LPI + +LQ ++E+Q G+TG GK+TQ+ QYLL G++
Sbjct: 153 FGRLAKLQHERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSH-- 210
Query: 632 IVGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETL 691
V CTQPRR+A +S+AKRVS E ++ G +VGY IRFE +T I ++T G+LLR+
Sbjct: 211 -VACTQPRRIACISLAKRVSFESLSQYGSQVGYQIRFESTRTAATKIVFLTVGLLLRQIQ 269
Query: 692 KDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGS 751
++ L +Y+V+++DE HER L D L G+L++++ +R D K+I+ SAT+N FS +FG+
Sbjct: 270 REPSLPQYQVLIVDEVHERHLHNDFLLGVLRRLLPKRPDLKVILMSATINISLFSSYFGT 329
Query: 752 VPIFHIPGRTFPVNTLYSKTPCEDYVEAAVK-------QAM-TIHITSPP---GDILIFM 800
P+ +PGR FP+ +Y E + K + + I PP GD+L+F+
Sbjct: 330 APVVQVPGRLFPITVVYQPQEAEPVASKSEKLDPGPFLRVLEAIDNKYPPEERGDLLVFL 389
Query: 801 TGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCI 860
+G EI + E + S T R V +LP++S L Q K+F+ A G RKCI
Sbjct: 390 SGMAEISSVL----EAAQTYASRTQRWV----VLPLHSALSVADQDKVFDVAPPGVRKCI 441
Query: 861 VATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXX 920
++TNIAETS+T+DGI +V+D+G K Y+P+ + LQ F +S
Sbjct: 442 LSTNIAETSVTIDGIRFVVDSGKVKEMGYDPQAKLHRLQEFWISQASAEQRKGRAGRTGP 501
Query: 921 XXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILN 980
C+RLY ES Y + P PVPEI+R L +V F F++PPP ++
Sbjct: 502 GVCFRLYAESDY-DAFAPYPVPEIRRVALDALVLQMKSMSVGDPRTFPFIEPPPPASLET 560
Query: 981 SMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPS 1040
++ L GAL++ ALT +G + + P+D + KML++G + VLTI + LSV S
Sbjct: 561 AILYLQDQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFHLAEPVLTIAAALSVQS 620
Query: 1041 VFFRPKDRAEESDAAREKFFVQESDHLTLLYVYQQW---KEHQYRGD--WCEEHYLHVKS 1095
F R E AAR + D TL V+ W K + R WC +
Sbjct: 621 PFTRSAQSNPECAAARRPLESDQGDPFTLFNVFNAWVQVKSERSRNSRKWCRHRGIEEHR 680
Query: 1096 LRKAREVRSQLLDILK 1111
L + +R Q ++L+
Sbjct: 681 LYEMANLRRQFKELLE 696
>UNIPROTKB|F1RLY9 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00355 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:9704 OMA:DSDQVFH GeneTree:ENSGT00700000104421
EMBL:FP102420 RefSeq:XP_003127294.1 Ensembl:ENSSSCT00000003454
GeneID:100515780 KEGG:ssc:100515780 Uniprot:F1RLY9
Length = 1146
Score = 831 (297.6 bits), Expect = 1.5e-82, Sum P(2) = 1.5e-82
Identities = 201/561 (35%), Positives = 294/561 (52%)
Query: 572 FAKSKTLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNG 631
FA+ L +R LPI RD +LQ ++E+Q G+TG GK+TQ+ QYLL G++
Sbjct: 149 FARLARLQRERAALPISQYRDRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSH-- 206
Query: 632 IVGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETL 691
V CTQPRR+A +S+AKRV E ++ G +VGY IRFE +T I ++T G+LLR
Sbjct: 207 -VACTQPRRIACISLAKRVGLESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRHVQ 265
Query: 692 KDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGS 751
++ L +YRV+++DE HER L D L G+L++++ RR D K+I+ SAT+N FS +FG
Sbjct: 266 REPTLPQYRVLIVDEVHERHLHNDFLLGVLQRLLPRRPDLKVILMSATVNTSLFSAYFGQ 325
Query: 752 VPIFHIPGRTFPVNTLYSKTPCEDYVEAA--------VKQAMTIHITSPP---GDILIFM 800
P+ +PGR FP+ +Y E ++ I PP GD+L+F+
Sbjct: 326 APVVQVPGRLFPITVVYQPQEAEPTASTLEKLDPRPFIRVLEAIDSKYPPEERGDLLVFL 385
Query: 801 TGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCI 860
+G EI A A + R ++LP++S L Q K+F+ A G RKCI
Sbjct: 386 SGLAEIGAVLEAAQAH--------ARRSGRWVVLPLHSTLSVAAQDKVFDVAPPGVRKCI 437
Query: 861 VATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXX 920
++TNIAETS+T+DGI +V+D+G K Y+P+ + LQ F +S
Sbjct: 438 LSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAGRTGP 497
Query: 921 XXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILN 980
C+RLY ES Y + P PVPEI+R L +V F F++PPP ++
Sbjct: 498 GVCFRLYAESDY-DAFAPYPVPEIRRVALDALVLQMKSMSVGDPRTFPFIEPPPAASLET 556
Query: 981 SMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPS 1040
++ L GAL+ ALT +G + + P+D + KML++G L + VLTI + LSV S
Sbjct: 557 AILYLRDQGALDGSEALTPIGSLLAQLPVDIVIGKMLVLGSVLHLAEPVLTIAAALSVQS 616
Query: 1041 VFFRPKDRAEESDAAREKFFVQESDH---LTLLYVYQQWKEHQYRGD-------WCEEHY 1090
F R R+ A R ESDH TL V+ W Q + D WC
Sbjct: 617 PFTR-STRSNPKCAWR----ALESDHGDPFTLFNVFNNWV--QVKSDRSTKSRRWCRREG 669
Query: 1091 LHVKSLRKAREVRSQLLDILK 1111
+ L + +R Q ++L+
Sbjct: 670 IEEHRLYEMANLRRQFKELLE 690
Score = 46 (21.3 bits), Expect = 1.5e-82, Sum P(2) = 1.5e-82
Identities = 8/32 (25%), Positives = 14/32 (43%)
Query: 224 GTRRTPGRSDWDDGR--WEWEDTPRREGYSNS 253
G R P W++ R W W +R + ++
Sbjct: 11 GPRDQPPTPSWEEARERWNWHHPEKRRLFEDA 42
>UNIPROTKB|E1BJ90 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00355 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:DSDQVFH GeneTree:ENSGT00700000104421
EMBL:DAAA02047415 IPI:IPI00713665 UniGene:Bt.42016
Ensembl:ENSBTAT00000008999 NextBio:20867826 Uniprot:E1BJ90
Length = 1146
Score = 833 (298.3 bits), Expect = 5.2e-82, Sum P(2) = 5.2e-82
Identities = 195/556 (35%), Positives = 295/556 (53%)
Query: 572 FAKSKTLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNG 631
F + L +R LPI +LQ+++E+Q G+TG GK+TQ+ QYLL G +
Sbjct: 149 FGRLAKLQRERAALPIAQYGHHILQMLKEHQVVVVAGDTGCGKSTQVPQYLLAAGCSH-- 206
Query: 632 IVGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETL 691
V CTQPRR+A +S+AKRV E ++ G +VGY IRFE +T I ++T G+LLR+
Sbjct: 207 -VACTQPRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRQMQ 265
Query: 692 KDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGS 751
++ L +Y+V+++DE HER L D L G+L++++ +R D K+++ SAT+N FS +FG+
Sbjct: 266 REPSLPQYQVLIVDEVHERHLHNDFLLGVLQRLLPQRPDLKVVLMSATINISLFSSYFGN 325
Query: 752 VPIFHIPGRTFPVNTLYSKTPCEDYVEAAVK-------QAM-TIHITSPP---GDILIFM 800
P+ +PGR FP+ +Y E + K + + I PP GD+L+F+
Sbjct: 326 APVVQVPGRLFPITVVYQPQEAEPTTSKSEKLDPRPFLRVLEAIDNKYPPEERGDLLVFL 385
Query: 801 TGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCI 860
+G EI A E + S T R V +LP++S L Q K+F+ A G RKCI
Sbjct: 386 SGMAEISAVL----EPAQAYASHTQRWV----VLPLHSALSVADQDKVFDVAPPGVRKCI 437
Query: 861 VATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXX 920
++TNIAETS+T+DGI +V+D+G K Y+P+ + LQ F +S
Sbjct: 438 LSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAGRTGP 497
Query: 921 XXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILN 980
C+RLY ES Y + P PVPEI+R L +V F F++PPP ++
Sbjct: 498 GVCFRLYAESDY-DAFAPYPVPEIRRVALDALVLQMKSMSVGDPRTFPFIEPPPPTSLET 556
Query: 981 SMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPS 1040
++ L GAL++ ALT +G + + P+D + KML++G + VLTI + LSV +
Sbjct: 557 AILYLRDQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFHLAEPVLTIAAALSVQT 616
Query: 1041 VFFRPKDRAEESDAAREKFFVQESDHLTLLYVYQQW---KEHQYRGD--WCEEHYLHVKS 1095
F R E A R + D TLL V+ W K + R WC +
Sbjct: 617 PFTRSAQSNPECAATRRPLESDQGDPFTLLNVFNTWVQVKSERGRNSRKWCRHRGIEEHR 676
Query: 1096 LRKAREVRSQLLDILK 1111
L + +R Q ++L+
Sbjct: 677 LYEMANLRRQFKELLE 692
Score = 37 (18.1 bits), Expect = 5.2e-82, Sum P(2) = 5.2e-82
Identities = 9/15 (60%), Positives = 10/15 (66%)
Query: 175 LKDDTRSESRGPSRR 189
L D R +SRGP RR
Sbjct: 111 LGPDAR-DSRGPGRR 124
>TAIR|locus:2142459 [details] [associations]
symbol:AT5G10370 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR002867
InterPro:IPR004087 InterPro:IPR007087 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF01485 Pfam:PF04408 PROSITE:PS00028 PROSITE:PS00690
PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184 SMART:SM00322
SMART:SM00355 SMART:SM00490 SMART:SM00647 SMART:SM00847
Pfam:PF00097 Prosite:PS00518 GO:GO:0005524 EMBL:CP002688
GO:GO:0046872 GO:GO:0008270 GO:GO:0003723 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12818 IPI:IPI00548793
RefSeq:NP_196599.2 UniGene:At.49004 PRIDE:F4KGU4
EnsemblPlants:AT5G10370.1 GeneID:830901 KEGG:ath:AT5G10370
OMA:HQEPEIR ArrayExpress:F4KGU4 Uniprot:F4KGU4
Length = 1775
Score = 848 (303.6 bits), Expect = 3.8e-81, Sum P(2) = 3.8e-81
Identities = 231/679 (34%), Positives = 344/679 (50%)
Query: 585 LPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNGIVGCTQPRRVAAM 644
LPI++ R ++L+ I Q GETGSGK+TQL Q+L + G + + CTQPR++AAM
Sbjct: 306 LPIYAYRRQILKKIHREQIMVLIGETGSGKSTQLVQFLADSGVAASESIVCTQPRKIAAM 365
Query: 645 SVAKRVSEEMDTELGDK-VGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDSDLDKYRVIV 703
++A RV EE + V F S+ + YMTD LL+ +KD L ++
Sbjct: 366 TLADRVREESSGCYEENTVSCTPTFSSTEEISSKVVYMTDNCLLQHYMKDRSLSGISCVI 425
Query: 704 MDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPIFHIPGRTFP 763
+DEAHERSL+TD+L +LKK+++RR D +L++ SAT +A++ S +F S I + GR FP
Sbjct: 426 IDEAHERSLNTDLLLALLKKLLSRRIDLRLVIMSATADAKQLSQYFFSCGILLVNGRNFP 485
Query: 764 VNTLYSKTPCED---------YVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALK 814
V +YS + E+ YV VK A+ IH T G IL F+T Q E+E AC
Sbjct: 486 VEIVYSPSDTEENSVVGGIASYVGDVVKMAVEIHKTEKEGTILAFLTSQAEVEWAC---- 541
Query: 815 ERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDG 874
E+ I+ P + LP++ +L + Q ++F+ G RK I ATNIAETSLT+ G
Sbjct: 542 ---ERFIT------PSAIALPLHGKLSFEEQFRVFQN-HPGRRKVIFATNIAETSLTIPG 591
Query: 875 IFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLN 934
+ YVID+G K Y P+ GM L+V VS CYRLY+++ + +
Sbjct: 592 VKYVIDSGMVKESKYEPRTGMSILKVCRVSQSSARQRAGRAGRTEPGRCYRLYSKNDF-D 650
Query: 935 EMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGAL--- 991
M + PEI+R +LG + F+F+D P E I ++ L LGA+
Sbjct: 651 SMNLNQEPEIRRVHLGVALLRMLALGVNNIAEFNFVDAPVPEAIAMAVQNLVQLGAVVEK 710
Query: 992 NNVGALTDLGWKMVEFPLDPPLAKMLL--MGEQLGCLDEVLTIVSMLSVPSVFFRPK--D 1047
N V LT G +V+ L+P L K++L ++G VL V M + S+F R D
Sbjct: 711 NGVHELTQEGHCLVKLGLEPKLGKLILGCFRHRMGKEGIVLAAV-MANASSIFCRVGNFD 769
Query: 1048 RAEESDAAREKFFVQESDHLTLLYVYQQWKE--HQYRGDWCEEHYLHVKSLRKAREVRSQ 1105
++D + +F Q D TLL VY++W + R WC E+ L+ KS+R+ + +
Sbjct: 770 DKMKADRLKVQFCNQNGDLFTLLSVYKEWASLPRERRNKWCWENSLNAKSMRRCEDTVKE 829
Query: 1106 L-LDILKTLKI---------PLTSSGHDFDVVRKAICSAYFHNAARLKGVGE--YINCRN 1153
L + I + L + P + HD + + I ++ N A G + Y
Sbjct: 830 LEICIERELTLVSPSYWVWNPNEGTKHDKHL-KMVILASLAENVAMYTGYNQLGYEVALT 888
Query: 1154 GMPCHLHPSSAIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMF-FSVKDS 1212
G LHPS ++ G P +VV+ EL+ +Y+ C TA + + L L P F V
Sbjct: 889 GQQVQLHPSCSLLAFGQKPSWVVFGELLSIVDQYLVCVTACDFEALYMLDPPPPFDVSQM 948
Query: 1213 DTSMLEHKKKQKESKTAME 1231
D L KK S T ++
Sbjct: 949 DERRLRIKKVVGCSSTVLK 967
Score = 41 (19.5 bits), Expect = 3.8e-81, Sum P(2) = 3.8e-81
Identities = 13/58 (22%), Positives = 23/58 (39%)
Query: 177 DDTRSESRGPSRRDNYDSKGRYRGREARDRDEPEYGGEYGRKRSKYDGTRRTPG-RSD 233
D RS + + + S RY R A+ + + ++ S+Y + P R D
Sbjct: 9 DGGRSATDRRQQSSHSSSTNRYNSRSAQSSPPLNHRPTWNQQHSQYPNSNFPPNYRRD 66
>UNIPROTKB|F1PER1 [details] [associations]
symbol:DHX32 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR007502
Pfam:PF04408 SMART:SM00847 GO:GO:0005524 GO:GO:0004386
InterPro:IPR014001 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00650000093246 CTD:55760 OMA:LACEQDI
EMBL:AAEX03015636 RefSeq:XP_003433686.1 Ensembl:ENSCAFT00000020520
GeneID:100685023 KEGG:cfa:100685023 Uniprot:F1PER1
Length = 745
Score = 813 (291.2 bits), Expect = 1.5e-80, P = 1.5e-80
Identities = 192/654 (29%), Positives = 344/654 (52%)
Query: 578 LAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQ----YLLEDGYTTNGIV 633
L ++R+ LPI+ + ++ + +NQ G+ GK++Q+ Q Y L Y G+V
Sbjct: 55 LLKEREDLPIWKEKYSFMENLLQNQIVIVSGDAKCGKSSQVPQWCAEYCLSIHYQHGGVV 114
Query: 634 GCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKD 693
CTQ + A+ +A RV++EMD +G +VGY I FE+ T+++Y TD +L RE +
Sbjct: 115 -CTQVHKPTAVQLALRVADEMDVNIGHEVGYMIPFENCCSSETILRYCTDDMLQREMMSS 173
Query: 694 SDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVP 753
L Y VI++D+ HERS++TDVL G+LK V+ R + KLI+ S+ K S ++G+VP
Sbjct: 174 PFLGNYGVIILDDIHERSIATDVLLGLLKDVLLARPELKLIINSSPHLISKLSSYYGNVP 233
Query: 754 IFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFAL 813
+ + + PV +Y ++ +E+ ++ IH + GDI++F+ + +IE A
Sbjct: 234 LIEVK-KQHPVEVVYLSGAQKESLESILRLIFEIHQSGEKGDIVVFLACEQDIEKAY--- 289
Query: 814 KERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKC-------IVATNIA 866
E + Q S+ ++ EL+++P+Y P + + +F+ E ++C ++ +
Sbjct: 290 -EIVCQEGSNLNPDLGELVVVPLY---PKE-KCALFKPNDETEKRCQVYQRRVVLTASSG 344
Query: 867 ETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRL 926
E+ + + + +VID G + KVYNP++ ++L P+S + L
Sbjct: 345 ESLIWSNTVRFVIDVGVERRKVYNPRIRANSLVTQPISQSQAEIRKQILGSSSSGKLFCL 404
Query: 927 YTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLW 986
Y+E +M P E+Q NL ++V DFM+ P E+++ ++ L
Sbjct: 405 YSEEFASKDMRPLKPAEMQEANLTSMVLFMKRVDIAGLGHCDFMNRPAPESLMQALEDLD 464
Query: 987 VLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPK 1046
L AL+N G L++ G M EFPLDP L+K +L + C++E+LTI +M++ P+ F
Sbjct: 465 YLAALDNDGNLSEFGIIMSEFPLDPQLSKSILASCEFDCVEEMLTIAAMVTAPNCFSNLP 524
Query: 1047 DRAEESDAAREKFFVQ-ESDHLTLLYVYQQWKEHQYRGD-------WCEEHYLHVKSLRK 1098
AEE+ K F+ E DH TL+ +Y+ +++ WC +++L+ +LR
Sbjct: 525 HGAEEAALTCWKTFLHPEGDHFTLINIYKAYQDIALNSTSDHCVEKWCHDYFLNCCALRM 584
Query: 1099 AREVRSQLLDILKTLKIPLTSS--GHDFDV--VRKAICSAYFHNAAR-LKGVGEYINCRN 1153
A +R++LL+I+K +++P G + ++KA+ S YF AR + G G Y+ +
Sbjct: 585 ADVIRAELLEIVKRIELPCAEPAFGSKENALNIKKALLSGYFMQIARDVDGSGNYLMLTH 644
Query: 1154 GMPCHLHPSSAIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFF 1207
LHP S+ PE+V++H+ ++ Y++ + + P+ +L P ++
Sbjct: 645 KQVAQLHPLSSYSITKKMPEWVLFHKFSISENNYIRITSEISPELFMQLAPPYY 698
>MGI|MGI:1918973 [details] [associations]
symbol:Dhx34 "DEAH (Asp-Glu-Ala-His) box polypeptide 34"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005622
"intracellular" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00355 SMART:SM00490 SMART:SM00847
MGI:MGI:1918973 GO:GO:0005524 GO:GO:0008270 GO:GO:0003723
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
CTD:9704 HOGENOM:HOG000232193 ChiTaRS:DHX34 EMBL:AK129062
EMBL:AK004733 IPI:IPI00113303 RefSeq:NP_082159.3 UniGene:Mm.75259
ProteinModelPortal:Q9DBV3 SMR:Q9DBV3 PhosphoSite:Q9DBV3
PaxDb:Q9DBV3 PRIDE:Q9DBV3 Ensembl:ENSMUST00000094816
Ensembl:ENSMUST00000163968 GeneID:71723 KEGG:mmu:71723
GeneTree:ENSGT00700000104421 HOVERGEN:HBG051355 NextBio:334335
Bgee:Q9DBV3 CleanEx:MM_DHX34 Genevestigator:Q9DBV3
GermOnline:ENSMUSG00000006019 Uniprot:Q9DBV3
Length = 1145
Score = 824 (295.1 bits), Expect = 2.4e-80, P = 2.4e-80
Identities = 191/556 (34%), Positives = 294/556 (52%)
Query: 572 FAKSKTLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNG 631
F + L +R LPI + +LQ ++E+Q G+TG GK+TQ+ QYLL G++
Sbjct: 151 FGRLAKLQRERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSH-- 208
Query: 632 IVGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETL 691
V CTQPRR+A +S+AKRV E ++ G +VGY IRFE +T I ++T G+LLR+
Sbjct: 209 -VACTQPRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRQIQ 267
Query: 692 KDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGS 751
++ L +Y+V+++DE HER L D L G+L++++ +R D K+I+ SAT+N FS +F
Sbjct: 268 REPSLPQYQVLIVDEVHERHLHNDFLLGVLQRLLPQRPDLKVILMSATINISLFSSYFSH 327
Query: 752 VPIFHIPGRTFPVNTLYSKTPCEDYVEAAVK-------QAM-TIHITSPP---GDILIFM 800
P+ +PGR FP+ +Y + + K + + I PP GD+L+F+
Sbjct: 328 APVVQVPGRLFPITVVYQPQEADQTASKSEKLDPRPFLRVLEAIDNKYPPEERGDLLVFL 387
Query: 801 TGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCI 860
+G EI A Q +S T+ ++LP++S L Q K+F+ A G RKCI
Sbjct: 388 SGMAEITTVLDAA-----QAYASLTQR---WVVLPLHSALSVSDQDKVFDVAPAGVRKCI 439
Query: 861 VATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXX 920
++TNIAETS+T+DGI +V+D+G K Y+P+ + LQ F +S
Sbjct: 440 LSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAGRTGP 499
Query: 921 XXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILN 980
CYRLY ES Y + P PVPEI+R L +V F F++PPP ++
Sbjct: 500 GVCYRLYAESDY-DAFAPYPVPEIRRVALDALVLQMKSMSVGDPRTFPFIEPPPPASVET 558
Query: 981 SMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPS 1040
++ L GAL++ ALT +G + + P+D + KML++G + VLTI + LSV S
Sbjct: 559 AILYLQEQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFSLAEPVLTIAAALSVQS 618
Query: 1041 VFFRPKDRAEESDAAREKFFVQESDHLTLLYVYQQWKE--HQYRGD---WCEEHYLHVKS 1095
F R + AR + D TL V+ W + + G+ WC +
Sbjct: 619 PFTRSAQSNLDCATARRPLESDQGDPFTLFNVFNAWVQVKSERSGNSRKWCRRRGVEEHR 678
Query: 1096 LRKAREVRSQLLDILK 1111
L + +R Q ++L+
Sbjct: 679 LYEMANLRRQFKELLE 694
>UNIPROTKB|E1C9C2 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 OMA:AKLQPRT EMBL:AADN02034854
IPI:IPI00601367 Ensembl:ENSGALT00000004688 Uniprot:E1C9C2
Length = 1145
Score = 532 (192.3 bits), Expect = 4.5e-80, Sum P(3) = 4.5e-80
Identities = 148/442 (33%), Positives = 229/442 (51%)
Query: 391 QKKEVELAKRLVRKDGSRMSLAQSKKLSQITADNHQWEERQLLRSGAVRGTELSTEFDDE 450
+K++ + A VR+ +S Q K L ++ + ++R L S +LS +
Sbjct: 55 KKEKKKKAPNAVRQQKKPLSKKQKKNLQKVLEQKEKKKQRAELLS------KLSEVQASQ 108
Query: 451 EEHKVILLVHDTKPPFLDGRIVFTKQA--EPVMPIKDPTSDMAIISRK----GSALVREI 504
E K L++ T + GR+ K+ EP + + ++ +++ S E
Sbjct: 109 AEMK---LLYTTSKLGIGGRMYQPKRVLQEPGTAVPEKIRSISGANKRRHSSDSEPEPEG 165
Query: 505 REKQTQNKSRQRFWELAGSQMGNILGVKKTAEQVDADTAVVGEQGEIDFREDAKFSQHMK 564
++ + ++ E+ GN+ K E VV Q A S+
Sbjct: 166 ESSGSEEEKKEEKQEIEKPSAGNVNSAGKPEE--GTKKPVVSHQAAP--AAPAASSKPSC 221
Query: 565 KGEAVSDFAKSKTLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLE 624
K +S + E R LPI + +++ I EN GETGSGKTTQ+ Q+L E
Sbjct: 222 KPAVYVPVDRSPEIQEARLKLPILAEEQVIMEAINENPIVVICGETGSGKTTQVPQFLYE 281
Query: 625 DGYTT-NGIVGCTQPRRVAAMSVAKRVSEEMDTELGDKV-GYAIRFEDVTGPSTLIKYMT 682
GYT+ NGI+G T+PRRVAA+S+++RV++EM+ L +V Y IR+E T T IK+MT
Sbjct: 282 AGYTSSNGIIGITEPRRVAAVSMSQRVAKEMN--LSHRVVSYQIRYEGNTTDETQIKFMT 339
Query: 683 DGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRD----FKLIVTSA 738
DGVLL+E KD L KY+VI++DEAHERS+ TD+L G+L ++V R KLI+ SA
Sbjct: 340 DGVLLKEVQKDFLLSKYKVIIIDEAHERSMYTDILIGLLSRIVPLREKKGLPLKLIIMSA 399
Query: 739 TLNAQKFSD----FFGSVPIFHIPGRTFPVNTLYSK-TPCEDYVEAAVKQAMTIHITSPP 793
TL + F++ F G+ P+ + R FPV ++K TP +DY ++ IH P
Sbjct: 400 TLRVEDFTENTRLFAGTPPVLQVDARQFPVTVHFNKKTPLDDYSGECFRKVCKIHRMLPS 459
Query: 794 GDILIFMTGQDEIEAACFALKE 815
G IL+F+TGQ E+ + C L++
Sbjct: 460 GGILVFLTGQAEVHSLCRRLRK 481
Score = 290 (107.1 bits), Expect = 4.5e-80, Sum P(3) = 4.5e-80
Identities = 78/244 (31%), Positives = 114/244 (46%)
Query: 831 LLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYN 890
L +LP+YS L + QAK+F GTR C+VATN+AETSLT+ GI YV+D G K + Y+
Sbjct: 577 LYVLPLYSLLAPEKQAKVFRPPPPGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRFYD 636
Query: 891 PKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLG 950
G+ + +V +S CYRLY+ + ++ + PEI + +
Sbjct: 637 KITGVSSFRVTWISQASANQRAGRAGRTEPGHCYRLYSSAVFM-DFEKFSAPEITKRPVE 695
Query: 951 NVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNN---VGALTD-------- 999
+++ F F PPP E + + L LGAL G L +
Sbjct: 696 DLILQMKALNIEKVINFPFPTPPPTEALAAAEELLIALGALKEPPMTGRLKEQQAAKLSC 755
Query: 1000 ----LGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFR-PKDRAEESDA 1054
LG M FP+ P AKML + Q CL +TIVS ++V +F + A E +
Sbjct: 756 PISPLGRVMATFPVAPRYAKMLALSRQHDCLPYTITIVSAMTVRELFEEFDRPAASEEET 815
Query: 1055 AREK 1058
+ K
Sbjct: 816 VKLK 819
Score = 121 (47.7 bits), Expect = 4.5e-80, Sum P(3) = 4.5e-80
Identities = 23/51 (45%), Positives = 34/51 (66%)
Query: 1156 PCHLHPSSAIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMF 1206
P +HPSS ++ PE+VVY E++ TTK YM+ +AVEP+W+ L P +
Sbjct: 952 PVFIHPSSVLFK--QLPEFVVYQEIVETTKLYMKGVSAVEPEWIPALLPPY 1000
Score = 50 (22.7 bits), Expect = 2.5e-28, Sum P(3) = 2.5e-28
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 689 ETLKDSDLDKYRVIVMDEAHE-RSLSTD 715
+TL +LD Y V+ +DE E R TD
Sbjct: 521 QTLPRINLDNYAVVPVDEGDEDRDAETD 548
>GENEDB_PFALCIPARUM|PF08_0042 [details] [associations]
symbol:PF08_0042 "ATP-dependent RNA helicase
prh1, putative" species:5833 "Plasmodium falciparum" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509
EMBL:AL844507 RefSeq:XP_001349312.1 ProteinModelPortal:Q8IB47
EnsemblProtists:PF08_0042:mRNA GeneID:2655493 KEGG:pfa:PF08_0042
EuPathDB:PlasmoDB:PF3D7_0821300 ProtClustDB:CLSZ2515096
Uniprot:Q8IB47
Length = 867
Score = 333 (122.3 bits), Expect = 6.4e-79, Sum P(5) = 6.4e-79
Identities = 65/152 (42%), Positives = 99/152 (65%)
Query: 638 PRRVAAMSVAKRVSEEMDT-ELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDSDL 696
PRRVA ++VA+RVS+EM ++G+ VGY IRF++V T IK++TDG+L+RE + D L
Sbjct: 77 PRRVATITVAERVSKEMKRGDIGNYVGYTIRFKNVCSDKTRIKFVTDGILIREIMNDPLL 136
Query: 697 DKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPIFH 756
KY+ +++DE HERS+ TDVL G K ++ +R+ K+I+ SAT + F+ FF + PI
Sbjct: 137 KKYKFLILDEIHERSIRTDVLLGYTKILLQKRKKIKIILMSATFDINIFNQFFNNPPIIT 196
Query: 757 IPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIH 788
IP + + Y + EDY+ + V + IH
Sbjct: 197 IPHKLHKITIYYPRRNIEDYILSVVSTILQIH 228
Score = 326 (119.8 bits), Expect = 6.4e-79, Sum P(5) = 6.4e-79
Identities = 76/216 (35%), Positives = 116/216 (53%)
Query: 827 EVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKM 886
++ + IL +YS LP Q IFE TRK I++TNIAETS+T+ I YVID+G K+
Sbjct: 396 KIYNMKILQLYSSLPNKKQKVIFEPVPPNTRKVILSTNIAETSVTIPNIKYVIDSGKVKI 455
Query: 887 KVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQR 946
K ++ G + L+V +S YR+YT+ Y N M P +PEI R
Sbjct: 456 KYFDVNRGSNVLRVTQISKDSAIQRSGRAGREAPGQVYRIYTKEEYEN-MNPFLIPEIFR 514
Query: 947 TNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVE 1006
++L + F+F + P +E ++S L+ + A++ LTDLG K+
Sbjct: 515 SDLTQIYLELKAMNINNPLEFNFPENPRKELFVHSAKMLFKINAIDMNNNLTDLGKKLCL 574
Query: 1007 FPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVF 1042
FPL+P A +LL + C+DE+ TIV++L+ S+F
Sbjct: 575 FPLNPIYANILLCSIEFNCIDEIATIVALLNCDSIF 610
Score = 212 (79.7 bits), Expect = 6.4e-79, Sum P(5) = 6.4e-79
Identities = 48/172 (27%), Positives = 86/172 (50%)
Query: 1047 DRAEESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGD--WCEEHYLHVKSLRKAREVRS 1104
D+ + + AR K + DHLTLL+++ W+E + +C + L+ + L++ +++
Sbjct: 696 DKNKLINVARRKLIHPDGDHLTLLHIFYLWQEADIKEKKHFCNIYALNNEILQQVEKIKI 755
Query: 1105 QLLDILKT---LKIPLTSSGHDFDVVRKAICSAYFHNAAR-LKGVGEYINCRNGMPCHLH 1160
QLL+I+K ++IP H +D + +C A F N A+ YIN N +H
Sbjct: 756 QLLEIMKNKMKIEIPKKLHMHKWDQILICLCKACFFNIAKSTSNTNVYINLVNKTKIRIH 815
Query: 1161 PSSAIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFFSVKDS 1212
PSS ++ P ++ Y +++ T + Y + T +E WL + F V S
Sbjct: 816 PSSTLFNSYIKPTFIFYSDIVQTKRLYARIVTKIEADWLLKYVSAKFQVAKS 867
Score = 85 (35.0 bits), Expect = 6.4e-79, Sum P(5) = 6.4e-79
Identities = 17/40 (42%), Positives = 25/40 (62%)
Query: 585 LPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLE 624
LPI + E+ ++I++N GETG GKTTQ+ Q + E
Sbjct: 4 LPILKYKHEIKKLIKKNNLIIIKGETGCGKTTQVPQIINE 43
Score = 71 (30.1 bits), Expect = 6.4e-79, Sum P(5) = 6.4e-79
Identities = 13/25 (52%), Positives = 19/25 (76%)
Query: 794 GDILIFMTGQDEIEAACFALKERME 818
GDIL+F+ GQ+EIE LKE+++
Sbjct: 317 GDILVFLPGQEEIEMVNIMLKEKLK 341
Score = 45 (20.9 bits), Expect = 3.0e-32, Sum P(4) = 3.0e-32
Identities = 35/168 (20%), Positives = 66/168 (39%)
Query: 1085 WCEEHYLHVKSLRKAREVRSQLLDILKTLKIPLTSSGHDFDVVRKAICSAYFHNAARLKG 1144
+ +E Y ++ RS L I LK ++ +F+ + H+A L
Sbjct: 496 YTKEEYENMNPFLIPEIFRSDLTQIYLELKAMNINNPLEFNFPENPRKELFVHSAKMLFK 555
Query: 1145 VGEYINCRNGMPCHLHPSSAIYGLGYTPEYVVYHELILTTKEYM---QCATAVEPQWLSE 1201
+ I+ N + L ++ L P +Y ++L + E+ + AT V
Sbjct: 556 INA-IDMNNNLT-DLGKKLCLFPLN--P---IYANILLCSIEFNCIDEIATIVALLNCDS 608
Query: 1202 LGPMFFSVKDSDT---SMLEHKKKQKESK-----TAMEEEMENLRKIQ 1241
+ + +D DT L+ KK E K ++E+ EN+ K++
Sbjct: 609 IFLNYNFYEDLDTLNNDSLDKKKNNNEQKKIVQKNSVEDSKENINKLE 656
Score = 39 (18.8 bits), Expect = 6.1e-44, Sum P(4) = 6.1e-44
Identities = 5/14 (35%), Positives = 12/14 (85%)
Query: 441 TELSTEFDDEEEHK 454
T S+EF+++++H+
Sbjct: 232 TSYSSEFENDDDHR 245
Score = 37 (18.1 bits), Expect = 9.9e-44, Sum P(4) = 9.9e-44
Identities = 17/80 (21%), Positives = 30/80 (37%)
Query: 462 TKPPFLDGRIVFTKQAEPVMPIKDPTSDMAIISRKGSALVREIREKQTQNKSRQRFWELA 521
T+ P + I F K+ + IK + K L+ R T + + E+
Sbjct: 35 TQVPQIINEIFFDKKEKKYDNIKHKNDEKKKRKEKKKMLISLPRRVATITVAERVSKEMK 94
Query: 522 GSQMGNILGVKKTAEQVDAD 541
+GN +G + V +D
Sbjct: 95 RGDIGNYVGYTIRFKNVCSD 114
>UNIPROTKB|Q8IB47 [details] [associations]
symbol:PF08_0042 "ATP-dependent RNA helicase prh1,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509
EMBL:AL844507 RefSeq:XP_001349312.1 ProteinModelPortal:Q8IB47
EnsemblProtists:PF08_0042:mRNA GeneID:2655493 KEGG:pfa:PF08_0042
EuPathDB:PlasmoDB:PF3D7_0821300 ProtClustDB:CLSZ2515096
Uniprot:Q8IB47
Length = 867
Score = 333 (122.3 bits), Expect = 6.4e-79, Sum P(5) = 6.4e-79
Identities = 65/152 (42%), Positives = 99/152 (65%)
Query: 638 PRRVAAMSVAKRVSEEMDT-ELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDSDL 696
PRRVA ++VA+RVS+EM ++G+ VGY IRF++V T IK++TDG+L+RE + D L
Sbjct: 77 PRRVATITVAERVSKEMKRGDIGNYVGYTIRFKNVCSDKTRIKFVTDGILIREIMNDPLL 136
Query: 697 DKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPIFH 756
KY+ +++DE HERS+ TDVL G K ++ +R+ K+I+ SAT + F+ FF + PI
Sbjct: 137 KKYKFLILDEIHERSIRTDVLLGYTKILLQKRKKIKIILMSATFDINIFNQFFNNPPIIT 196
Query: 757 IPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIH 788
IP + + Y + EDY+ + V + IH
Sbjct: 197 IPHKLHKITIYYPRRNIEDYILSVVSTILQIH 228
Score = 326 (119.8 bits), Expect = 6.4e-79, Sum P(5) = 6.4e-79
Identities = 76/216 (35%), Positives = 116/216 (53%)
Query: 827 EVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKM 886
++ + IL +YS LP Q IFE TRK I++TNIAETS+T+ I YVID+G K+
Sbjct: 396 KIYNMKILQLYSSLPNKKQKVIFEPVPPNTRKVILSTNIAETSVTIPNIKYVIDSGKVKI 455
Query: 887 KVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQR 946
K ++ G + L+V +S YR+YT+ Y N M P +PEI R
Sbjct: 456 KYFDVNRGSNVLRVTQISKDSAIQRSGRAGREAPGQVYRIYTKEEYEN-MNPFLIPEIFR 514
Query: 947 TNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVE 1006
++L + F+F + P +E ++S L+ + A++ LTDLG K+
Sbjct: 515 SDLTQIYLELKAMNINNPLEFNFPENPRKELFVHSAKMLFKINAIDMNNNLTDLGKKLCL 574
Query: 1007 FPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVF 1042
FPL+P A +LL + C+DE+ TIV++L+ S+F
Sbjct: 575 FPLNPIYANILLCSIEFNCIDEIATIVALLNCDSIF 610
Score = 212 (79.7 bits), Expect = 6.4e-79, Sum P(5) = 6.4e-79
Identities = 48/172 (27%), Positives = 86/172 (50%)
Query: 1047 DRAEESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGD--WCEEHYLHVKSLRKAREVRS 1104
D+ + + AR K + DHLTLL+++ W+E + +C + L+ + L++ +++
Sbjct: 696 DKNKLINVARRKLIHPDGDHLTLLHIFYLWQEADIKEKKHFCNIYALNNEILQQVEKIKI 755
Query: 1105 QLLDILKT---LKIPLTSSGHDFDVVRKAICSAYFHNAAR-LKGVGEYINCRNGMPCHLH 1160
QLL+I+K ++IP H +D + +C A F N A+ YIN N +H
Sbjct: 756 QLLEIMKNKMKIEIPKKLHMHKWDQILICLCKACFFNIAKSTSNTNVYINLVNKTKIRIH 815
Query: 1161 PSSAIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFFSVKDS 1212
PSS ++ P ++ Y +++ T + Y + T +E WL + F V S
Sbjct: 816 PSSTLFNSYIKPTFIFYSDIVQTKRLYARIVTKIEADWLLKYVSAKFQVAKS 867
Score = 85 (35.0 bits), Expect = 6.4e-79, Sum P(5) = 6.4e-79
Identities = 17/40 (42%), Positives = 25/40 (62%)
Query: 585 LPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLE 624
LPI + E+ ++I++N GETG GKTTQ+ Q + E
Sbjct: 4 LPILKYKHEIKKLIKKNNLIIIKGETGCGKTTQVPQIINE 43
Score = 71 (30.1 bits), Expect = 6.4e-79, Sum P(5) = 6.4e-79
Identities = 13/25 (52%), Positives = 19/25 (76%)
Query: 794 GDILIFMTGQDEIEAACFALKERME 818
GDIL+F+ GQ+EIE LKE+++
Sbjct: 317 GDILVFLPGQEEIEMVNIMLKEKLK 341
Score = 45 (20.9 bits), Expect = 3.0e-32, Sum P(4) = 3.0e-32
Identities = 35/168 (20%), Positives = 66/168 (39%)
Query: 1085 WCEEHYLHVKSLRKAREVRSQLLDILKTLKIPLTSSGHDFDVVRKAICSAYFHNAARLKG 1144
+ +E Y ++ RS L I LK ++ +F+ + H+A L
Sbjct: 496 YTKEEYENMNPFLIPEIFRSDLTQIYLELKAMNINNPLEFNFPENPRKELFVHSAKMLFK 555
Query: 1145 VGEYINCRNGMPCHLHPSSAIYGLGYTPEYVVYHELILTTKEYM---QCATAVEPQWLSE 1201
+ I+ N + L ++ L P +Y ++L + E+ + AT V
Sbjct: 556 INA-IDMNNNLT-DLGKKLCLFPLN--P---IYANILLCSIEFNCIDEIATIVALLNCDS 608
Query: 1202 LGPMFFSVKDSDT---SMLEHKKKQKESK-----TAMEEEMENLRKIQ 1241
+ + +D DT L+ KK E K ++E+ EN+ K++
Sbjct: 609 IFLNYNFYEDLDTLNNDSLDKKKNNNEQKKIVQKNSVEDSKENINKLE 656
Score = 39 (18.8 bits), Expect = 6.1e-44, Sum P(4) = 6.1e-44
Identities = 5/14 (35%), Positives = 12/14 (85%)
Query: 441 TELSTEFDDEEEHK 454
T S+EF+++++H+
Sbjct: 232 TSYSSEFENDDDHR 245
Score = 37 (18.1 bits), Expect = 9.9e-44, Sum P(4) = 9.9e-44
Identities = 17/80 (21%), Positives = 30/80 (37%)
Query: 462 TKPPFLDGRIVFTKQAEPVMPIKDPTSDMAIISRKGSALVREIREKQTQNKSRQRFWELA 521
T+ P + I F K+ + IK + K L+ R T + + E+
Sbjct: 35 TQVPQIINEIFFDKKEKKYDNIKHKNDEKKKRKEKKKMLISLPRRVATITVAERVSKEMK 94
Query: 522 GSQMGNILGVKKTAEQVDAD 541
+GN +G + V +D
Sbjct: 95 RGDIGNYVGYTIRFKNVCSD 114
>TAIR|locus:2007003 [details] [associations]
symbol:FAS4 "FASCIATED STEM 4" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
EMBL:CP002684 GO:GO:0005524 GO:GO:0003676 EMBL:AC051630
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000201240 KO:K14780
IPI:IPI00531863 PIR:E86457 RefSeq:NP_174605.1 UniGene:At.39951
ProteinModelPortal:Q9C813 SMR:Q9C813 STRING:Q9C813 PRIDE:Q9C813
EnsemblPlants:AT1G33390.1 GeneID:840232 KEGG:ath:AT1G33390
TAIR:At1g33390 InParanoid:Q9C813 OMA:EVQWISK PhylomeDB:Q9C813
ProtClustDB:CLSN2693169 Genevestigator:Q9C813 Uniprot:Q9C813
Length = 1237
Score = 358 (131.1 bits), Expect = 1.1e-78, Sum P(5) = 1.1e-78
Identities = 79/221 (35%), Positives = 129/221 (58%)
Query: 520 LAGSQMGNILGVKKTAEQVDADTAVVGEQGEIDF---REDAKFSQHMKKGEAVSDFAKSK 576
++ + + L V T + + T ++ +D ED Q + V ++
Sbjct: 174 ISAEESSSKLEVDDTVDMIPLTTCRDDDEDSMDGLIENEDVTV-QGPRVPAFVVHVSRPA 232
Query: 577 TLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGY------TTN 630
+ E R+ LPI + E+++ I + G+TG GKTTQ+ Q+L E G+ + +
Sbjct: 233 EVEETRKDLPIVMMEQEIMEAINRHPAVIISGQTGCGKTTQVPQFLYEAGFGSKQFSSRS 292
Query: 631 GIVGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRET 690
GI+G TQPRRVA ++ AKRV+ E+ LG +VG+ +R++ G ++ IK+MTDG+LLRE
Sbjct: 293 GIIGITQPRRVAVLATAKRVAFELGVRLGKEVGFQVRYDKKIGENSSIKFMTDGILLREI 352
Query: 691 LKDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDF 731
D L +Y VI++DEAHERSL+TD+L G+L +V+ R+++
Sbjct: 353 QNDFLLRRYSVIILDEAHERSLNTDILIGMLTRVIKIRQEY 393
Score = 286 (105.7 bits), Expect = 1.1e-78, Sum P(5) = 1.1e-78
Identities = 65/189 (34%), Positives = 98/189 (51%)
Query: 830 ELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVY 889
+L +LP+Y+ L Q ++FE+ ++ R +VATN+AETSLT+ GI YV+DTG K+K Y
Sbjct: 646 KLRVLPLYAMLSPAAQLRVFEEVEKEERLVVVATNVAETSLTIPGIKYVVDTGRVKVKNY 705
Query: 890 NPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNL 949
+ K GM++ +V +S CYRLY+ + + N S +PEI + +
Sbjct: 706 DSKTGMESYEVDWISQASASQRAGRAGRTGPGHCYRLYSSAVFSNIFEESSLPEIMKVPV 765
Query: 950 GNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPL 1009
V+ F F PP I + L L AL++ G LT LG M +P+
Sbjct: 766 DGVILLMKSMNIPKVENFPFPTPPEPSAIREAERCLKALEALDSNGGLTPLGKAMSHYPM 825
Query: 1010 DPPLAKMLL 1018
P ++MLL
Sbjct: 826 SPRHSRMLL 834
Score = 160 (61.4 bits), Expect = 1.1e-78, Sum P(5) = 1.1e-78
Identities = 36/95 (37%), Positives = 56/95 (58%)
Query: 732 KLIVTSATLNAQKFSD---FFGSVP-IFHIPGRTFPVNTLYSK-TPCEDYVEAAVKQAMT 786
KLI+ SATL + F F ++P + +P R +PV +SK T DY+ A K+ M+
Sbjct: 417 KLILMSATLRVEDFVSGKRLFPNIPPLIEVPTRQYPVTIHFSKKTEIVDYIGEAYKKVMS 476
Query: 787 IHITSPPGDILIFMTGQDEIEAACFALKERMEQLI 821
IH P G IL+F+TGQ E++ C L++ ++L+
Sbjct: 477 IHKKLPQGGILVFVTGQREVDYLCEKLRKSSKELV 511
Score = 129 (50.5 bits), Expect = 1.1e-78, Sum P(5) = 1.1e-78
Identities = 31/86 (36%), Positives = 46/86 (53%)
Query: 1114 KIPLTSSGHDFDVVRKAICSAYFHNAARLKGVGEYINCRNGMPCHLHPSSAIYGLGYTPE 1173
K PL + + +++ +AIC+ + AR EY C P LH S++ + PE
Sbjct: 997 KTPLLQN--EEELLGEAICAGWADRVARKTRATEYQACAVQEPVFLHRWSSL--INSAPE 1052
Query: 1174 YVVYHELILTTKEYMQCATAVEPQWL 1199
+VY EL+LT + YM AT V P+WL
Sbjct: 1053 LLVYSELLLTNRPYMHGATRVRPEWL 1078
Score = 103 (41.3 bits), Expect = 1.1e-78, Sum P(5) = 1.1e-78
Identities = 22/67 (32%), Positives = 40/67 (59%)
Query: 1044 RPKDRAEESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVR 1103
R KDR E+ AAR++F SD LT+ Y ++ + +CE + LH+K++ + +++
Sbjct: 895 RKKDRKEKIKAARDRFSNPSSDALTVAYALHSFEVSENGMGFCEANGLHLKTMDEMSKLK 954
Query: 1104 SQLLDIL 1110
QLL ++
Sbjct: 955 DQLLRLV 961
Score = 50 (22.7 bits), Expect = 2.9e-09, Sum P(3) = 2.9e-09
Identities = 20/70 (28%), Positives = 30/70 (42%)
Query: 68 KVPRVASVAASIDEEEKSESSGIDEVVSNATNGKRSHASRRYRETSARD-ITDAENPMAV 126
K R+ VA ++ E + GI VV +++ S+ E+ D I+ A
Sbjct: 670 KEERLVVVATNVAETSLT-IPGIKYVVDTGRVKVKNYDSKTGMESYEVDWISQASASQRA 728
Query: 127 GRAGETAGTH 136
GRAG T H
Sbjct: 729 GRAGRTGPGH 738
Score = 37 (18.1 bits), Expect = 8.4e-47, Sum P(4) = 8.4e-47
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 1026 LDEVLTIVSMLSVPSVFFRPKDRAEESDAARE 1057
+D V+ ++ +++P V P E A RE
Sbjct: 765 VDGVILLMKSMNIPKVENFPFPTPPEPSAIRE 796
>UNIPROTKB|F1SDM5 [details] [associations]
symbol:DHX32 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR007502 Pfam:PF04408 SMART:SM00847 GO:GO:0004386
InterPro:IPR011709 Pfam:PF07717 GeneTree:ENSGT00650000093246
OMA:LACEQDI EMBL:CT841550 Ensembl:ENSSSCT00000011756 Uniprot:F1SDM5
Length = 742
Score = 794 (284.6 bits), Expect = 1.9e-78, P = 1.9e-78
Identities = 192/656 (29%), Positives = 344/656 (52%)
Query: 578 LAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQ----YLLEDGYTTNGIV 633
L ++R+ LPI+ + ++ + ++Q G+ GK++Q+ Q Y L Y G+V
Sbjct: 55 LLKEREDLPIWKEKYSFMENLLQSQVVIVSGDATCGKSSQVPQWCAEYCLSIHYQHGGVV 114
Query: 634 GCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKD 693
CTQ + A+ +A RV++EMD +G +VGY I FE+ T+++Y TD +L RE + +
Sbjct: 115 -CTQVHKQTAVQLALRVADEMDVNIGHEVGYVIPFENCCTSETILRYCTDDMLQREMMSN 173
Query: 694 SDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVP 753
L Y VI++D+ ERS++TDVL G+LK V+ R + KLI+ S+ S ++G+VP
Sbjct: 174 PFLGSYGVIILDDVQERSIATDVLLGLLKDVLLARPELKLIINSSPHLISTLSSYYGNVP 233
Query: 754 IFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFAL 813
+ + + PV +Y ++ +EA ++ IH + GDI++F+ + +IE A
Sbjct: 234 LIEVTSKR-PVEVVYLSGAQKEALEAVLRLIFEIHHSGEEGDIVVFLACEQDIEKAY--- 289
Query: 814 KERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKC-------IVATNIA 866
E + Q ++ ++ EL+++P+Y P + + +F+ E ++C ++ +
Sbjct: 290 -EIVCQEGTNLNPDLGELVVVPLY---PKE-KCALFKPNDEAEKRCQVYQRRVVLTASSG 344
Query: 867 ETSLTVDGIFYVIDTGYGKMK-VYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYR 925
E+ + + + +VID G + K VY+P++ D+L + P+S +
Sbjct: 345 ESLIWSNTVRFVIDVGVERRKKVYSPRIRADSLVLQPISQSQAEMRKQVLGSSSSGKLFC 404
Query: 926 LYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQL 985
LY+E +M P E+Q NL ++V DFM+ P E+++ ++ L
Sbjct: 405 LYSEEFASKDMRPLKPAEMQHANLTSMVLFMKRVDIAGLGHCDFMNRPAPESLMQALEDL 464
Query: 986 WVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRP 1045
L AL+N G L++ G M EFPLDP L+K +L + C+DE+LTI +M++ P+ F
Sbjct: 465 DYLAALDNDGNLSEFGIIMSEFPLDPQLSKSILASCEFDCVDEMLTIAAMVTAPNCFSHL 524
Query: 1046 KDRAE-ESDAAREKFFVQESDHLTLLYVYQQWK--------EHQYRGDWCEEHYLHVKSL 1096
AE E+ + F E DH TL+ +Y+ ++ EH WC +++L+ +L
Sbjct: 525 PSGAEAEALTCWKTFLHPEGDHFTLVNLYKAFQDVTLNSTSEHCVE-KWCHDYFLNCSAL 583
Query: 1097 RKAREVRSQLLDILKTLKIPLTSS--GHDFDV--VRKAICSAYFHNAAR-LKGVGEYINC 1151
R A +R++LL+I+K +++P G + ++KA+ S YF AR + G G Y+
Sbjct: 584 RMADVIRAELLEIIKRIELPYAEPAFGSKENTLNIKKALLSGYFMQIARDVDGSGNYLML 643
Query: 1152 RNGMPCHLHPSSAIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFF 1207
+ LHP S PE+V++H+ ++ Y++ A+ + P+ +L P ++
Sbjct: 644 THKQVAQLHPLSCYSVTKKMPEWVLFHKFSISENNYIRIASEISPELFMQLVPQYY 699
>UNIPROTKB|O83538 [details] [associations]
symbol:TP_0526 "ATP-dependent helicase (HrpA)"
species:243276 "Treponema pallidum subsp. pallidum str. Nichols"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AE000520
GenomeReviews:AE000520_GR PIR:H71312 RefSeq:NP_218966.1
ProteinModelPortal:O83538 IntAct:O83538 GeneID:2610764
KEGG:tpa:TP0526 PATRIC:20531093 OMA:WEYRERF ProtClustDB:CLSK507866
Uniprot:O83538
Length = 668
Score = 793 (284.2 bits), Expect = 2.5e-78, P = 2.5e-78
Identities = 199/627 (31%), Positives = 323/627 (51%)
Query: 585 LPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNGIVGCTQPRRVAAM 644
LP++S +D++L + + TGSGKTTQL L E GY G +G TQPRR+A +
Sbjct: 7 LPVYSQKDKILSALAHHHVIVVESPTGSGKTTQLPLILHEAGYNEGGAIGVTQPRRIAVL 66
Query: 645 SVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDSDLDKYRVIVM 704
SV++ +++++ VGY +RFED T T IK MTDG+LL+E D L KY +I++
Sbjct: 67 SVSEFIAKQVLHVQPGIVGYKMRFEDHTDVETKIKVMTDGILLQEMKLDPLLSKYSIIMV 126
Query: 705 DEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPIFHIPGRTFPV 764
DEAHERSL+ D + G+LK+V+ +R DF+++++SAT+N FS +F P+ I +PV
Sbjct: 127 DEAHERSLNIDFILGLLKRVLQQRHDFRIVISSATINTAMFSRYFNECPVIKIDAVAYPV 186
Query: 765 NTLYSK--TPCEDYV---EAAVKQAMTIHI-----TSPPGDILIFMTGQDEIEAACFALK 814
++ TP + EAA+ + + + + G ILIF+ G+ I+ C
Sbjct: 187 TVIFDPPDTPASTHTKEAEAALLEKIVCIVERVIASRDKGAILIFLPGERSIKN-CIT-- 243
Query: 815 ERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDG 874
R+ S R +L +LP+Y +L + Q ++F +A G RK ++ATNIAETS+T+D
Sbjct: 244 -RL-----SHERWFRKLFLLPLYGRLSKEEQEQVFNRAPFGKRKVVIATNIAETSITIDD 297
Query: 875 IFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLN 934
+ VID+G K+ YNP +L P+S CYRLY+ +
Sbjct: 298 VTTVIDSGLVKLNSYNPLSYTASLDETPISQASCNQRRGRAGRVRAGTCYRLYSRDDF-E 356
Query: 935 EMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNV 994
+ P + EI RT+L VV FDF+ PP I+ + L +LGAL +
Sbjct: 357 QREPYTLEEIYRTDLSEVVMRMAELGIHDFEHFDFISPPGTHGIIGAEDTLRLLGALEDD 416
Query: 995 GALTDLGWKMVEFPLDPPLAKMLL--MGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEES 1052
+L+++G M FPL P ++M++ + +D+VL + LS S +D+ E++
Sbjct: 417 RSLSEIGKMMCLFPLGPRQSRMIVEALRRYPHSIDDVLIAAAFLSARSPLIFSEDQEEKT 476
Query: 1053 DAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQLLDILKT 1112
A F D ++ L +Y+ + + + +C+ YL + + + ++ QL I+
Sbjct: 477 KKAHGTFSDPMGDFVSFLRIYRAYAQENNKHSFCQHFYLDERIMAEISNIKEQLELIVSG 536
Query: 1113 LKIPLTSSGHDFDVVRKAICSAYFHNAARLKGVGEYINCRNGMP--C-HLHPSSAIYGLG 1169
+ PL + G V IC + V E+ + + C H+HP S +Y
Sbjct: 537 MGFPLLTGG---TVEEYLICVGT--GMIQFVCVQEHRDSYRSLTAECIHIHPGSCVYK-- 589
Query: 1170 YTPEYVVYHELILTTKEYMQCATAVEP 1196
P+++V E++ T++ Y A +V P
Sbjct: 590 DRPKFIVAGEIVRTSRMY---AMSVSP 613
>POMBASE|SPAPB1A10.06c [details] [associations]
symbol:SPAPB1A10.06c "ATP-dependent RNA helicase Dhr1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISM] [GO:0005524 "ATP binding" evidence=ISM] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0030490 "maturation of SSU-rRNA" evidence=ISO] [GO:0032040
"small-subunit processome" evidence=ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPAPB1A10.06c
GO:GO:0005524 EMBL:CU329670 GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 GO:GO:0032040
GO:GO:0030490 HOGENOM:HOG000201240 KO:K14780 OMA:HQLKREE
OrthoDB:EOG4KM2B8 EMBL:AB027915 RefSeq:NP_593520.1
ProteinModelPortal:Q9HDY4 STRING:Q9HDY4
EnsemblFungi:SPAPB1A10.06c.1 GeneID:2543371 KEGG:spo:SPAPB1A10.06c
NextBio:20804386 Uniprot:Q9HDY4
Length = 1183
Score = 489 (177.2 bits), Expect = 2.3e-77, Sum P(4) = 2.3e-77
Identities = 111/258 (43%), Positives = 153/258 (59%)
Query: 578 LAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTT----N-GI 632
+ E R LPI + +++ I N G TGSGKTTQL Q+L E G+++ N G+
Sbjct: 391 IQESRLALPIVAEEQRIMEQIFANDVVIICGATGSGKTTQLPQFLFEAGFSSPESENPGM 450
Query: 633 VGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLK 692
+ TQPRRVAA+S+AKRVSEE+ T KV Y IRF+ P T IK+MTDG+LLRE
Sbjct: 451 IAITQPRRVAAVSIAKRVSEEL-TGFSSKVSYQIRFDSTINPDTAIKFMTDGILLRELSS 509
Query: 693 DSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDF----------KLIVTSATLNA 742
D L Y +++DEAHERS++TD+L G+L ++V RR+ KLI+ SATL
Sbjct: 510 DFLLTAYSAVIVDEAHERSVNTDILLGLLSRIVRLRREMSKSDQKVKPLKLIIMSATLRV 569
Query: 743 QKFSD----FFGSVPIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILI 798
FS+ F PI I R +PV+ +++T DY++ A + IH P G IL+
Sbjct: 570 TDFSENKLLFSVPPPIIKIDARQYPVSIHFNRTTKPDYLQDAFDKVCLIHKRLPAGSILV 629
Query: 799 FMTGQDEIEAACFALKER 816
F+TGQ E+E C L++R
Sbjct: 630 FLTGQQEVEQLCQMLRKR 647
Score = 356 (130.4 bits), Expect = 2.3e-77, Sum P(4) = 2.3e-77
Identities = 81/217 (37%), Positives = 117/217 (53%)
Query: 827 EVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKM 886
E + +LP+YS L + Q K+F+ + EG R CIVATN+AETS+T+ I YV+D G K
Sbjct: 698 ESEPMYVLPLYSLLTTEDQMKVFDSSPEGHRMCIVATNVAETSITIPNIRYVVDCGKAKE 757
Query: 887 KVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLP-SPVPEIQ 945
+VYN K + +V +S CYRLY+ SA + P +PEI
Sbjct: 758 RVYNEKTSVQKFEVRWISKANADQRAGRAGRTGPGHCYRLYS-SAVFDSSFPLHSLPEIL 816
Query: 946 RTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMV 1005
RT + ++V F F P + + S+ L LGA+++ G LT LG +M
Sbjct: 817 RTPVESIVLQMKNMNIDNIANFPFPTSPGRSRLEKSLKLLSNLGAIDSEGVLTKLGEQMS 876
Query: 1006 EFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVF 1042
FPL P +KML++G+Q GCL V+ +VS LS+ +F
Sbjct: 877 LFPLSPRFSKMLIIGQQHGCLPYVIALVSALSINQLF 913
Score = 75 (31.5 bits), Expect = 2.3e-77, Sum P(4) = 2.3e-77
Identities = 37/142 (26%), Positives = 59/142 (41%)
Query: 1079 HQYRGD---WCEEHYLHVKSLRKAREVRSQLLDILKT---------LKIPLTS-SGHDFD 1125
+ Y D +C+E+YL K+L + +R Q++ +LK K+ L +
Sbjct: 980 YDYASDKRKFCKENYLREKALEEVTNLRKQIIGLLKRYMVRVEKEFFKLQLKPPTSVQIK 1039
Query: 1126 VVRKAICSAYFHNAARL-KGVGEYINC-RNGMPCHLHPSSAIYGLGYTPEYVVY---HEL 1180
+R+ I SAY A K Y+ +G Y + EYVVY HE
Sbjct: 1040 ALRQFIASAYIDQVALYDKEKRGYVTLFPSGSEVVQFVPDRTYNID--SEYVVYLSLHES 1097
Query: 1181 ILTTKEYMQCATAVEPQWLSEL 1202
+ + YM T + P+ L+ L
Sbjct: 1098 -RSGRVYMSPLTEISPEHLARL 1118
Score = 47 (21.6 bits), Expect = 2.3e-77, Sum P(4) = 2.3e-77
Identities = 15/54 (27%), Positives = 30/54 (55%)
Query: 378 DSSSFILGD--DASYQKKEVELAKRLVRKDGSRMSLAQSKKLSQITADNHQWEE 429
DS++ IL D QK++ EL +L++++ +S + K+L + + + EE
Sbjct: 51 DSNAEILIDVPKEERQKRKQELKDQLLKENEGSISSKKKKRLDKYIENKLKKEE 104
Score = 44 (20.5 bits), Expect = 5.1e-30, Sum P(3) = 5.1e-30
Identities = 14/50 (28%), Positives = 25/50 (50%)
Query: 217 RKRSKYDGTRRTPGRSDWDDGRWEWEDTPRREGYSNSSKRYQPSPSPMFV 266
+ R++ +R+T + +D + E ED + S+SS Y PM+V
Sbjct: 656 KSRARIVVSRKTMSVEN-EDLQSETEDIDQVPTSSSSSVTYDDESEPMYV 704
Score = 40 (19.1 bits), Expect = 1.3e-76, Sum P(4) = 1.3e-76
Identities = 15/63 (23%), Positives = 28/63 (44%)
Query: 351 ESMRLEMEYNSDRAWYDREEGTTMFDTDSSSFILGDDASYQKKEVELAKRLVRKDGSRMS 410
E+ ++E + D + D E + F + ++ ILG D + +V ++ D M
Sbjct: 292 ENEDFDLETSEDDSSDDATERASRFKSWANKQILGADVGEKSHDVAPDNKIDNPDAD-MV 350
Query: 411 LAQ 413
AQ
Sbjct: 351 RAQ 353
Score = 37 (18.1 bits), Expect = 2.7e-29, Sum P(3) = 2.7e-29
Identities = 8/29 (27%), Positives = 20/29 (68%)
Query: 72 VASVAASIDEEE-KSESSGIDEVVSNATN 99
V+ S++ E+ +SE+ ID+V +++++
Sbjct: 663 VSRKTMSVENEDLQSETEDIDQVPTSSSS 691
>UNIPROTKB|G4NGS5 [details] [associations]
symbol:MGG_04040 "DEAH box polypeptide 37" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
EMBL:CM001236 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K14780
RefSeq:XP_003719802.1 ProteinModelPortal:G4NGS5
EnsemblFungi:MGG_04040T0 GeneID:2677154 KEGG:mgr:MGG_04040
Uniprot:G4NGS5
Length = 1185
Score = 478 (173.3 bits), Expect = 7.8e-77, Sum P(4) = 7.8e-77
Identities = 108/274 (39%), Positives = 155/274 (56%)
Query: 574 KSKTLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGY-----T 628
+S + R LP+ S +++ I N G TGSGKTTQ+ Q+L E GY
Sbjct: 346 RSPEIQSARLALPVVSEEQRIMEAIHNNNIVVVCGATGSGKTTQIPQFLFEAGYGSPDSP 405
Query: 629 TNGIVGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLR 688
T G++G TQPRRVAA+S++KRV+EE+ KVGY IRFE T +K+MTDGVLLR
Sbjct: 406 TPGMIGITQPRRVAAVSMSKRVAEELGDH-SQKVGYQIRFEGTVNKDTAVKFMTDGVLLR 464
Query: 689 ETLKDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDF----------KLIVTSA 738
E +D L KY IV+DEAHERS++TD+L G+L +++ R + KL++ SA
Sbjct: 465 EVAQDLALRKYSAIVVDEAHERSVNTDILIGMLSRIIKLRAEMAQEDPTVKPLKLVIMSA 524
Query: 739 TLNAQKFSD----FFGSVPIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPG 794
TL + ++ F P+ + GR +PV +++ DYVE A ++ H PPG
Sbjct: 525 TLRIEDLTENKNLFATPPPVLEVEGRQYPVTLHFARKTHHDYVEEAFRKISRGHKKLPPG 584
Query: 795 DILIFMTGQDEIEAACFALKERMEQLISSTTREV 828
+L+F+TGQ+EI LK + + S +V
Sbjct: 585 GMLVFLTGQNEITQLSKRLKLQFNGVTSVNAPQV 618
Score = 348 (127.6 bits), Expect = 7.8e-77, Sum P(4) = 7.8e-77
Identities = 82/264 (31%), Positives = 140/264 (53%)
Query: 804 DEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVAT 863
DE E F ++E E+ + +R + +LP+YS LP Q ++FE +G+R ++AT
Sbjct: 654 DENEEEEFKIEE--EEAGTGPSR----MHVLPLYSLLPTKEQLRVFEPPPDGSRLVVLAT 707
Query: 864 NIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXC 923
N+AETSLT+ GI YV D+G K + Y+ G+ + +V +S C
Sbjct: 708 NVAETSLTIPGIRYVFDSGRSKERKYDQLTGVQSFEVGWISKASANQREGRAGRTGPGHC 767
Query: 924 YRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMY 983
+RLY+ + Y ++ +PE+ RT+L VV F F PP +++++ S
Sbjct: 768 WRLYSSAVYERDLDEFALPELLRTSLEGVVLQLKSMNLQHVVNFPFPTPPERDSLVKSEK 827
Query: 984 QLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFF 1043
L + A++ G +T +G+ M FPL P +++LL+G Q CL +T+V+ LS +F
Sbjct: 828 LLKYISAVSEEGRVTQVGYTMSIFPLSPRFSRILLLGHQHDCLHYTVTLVAALSAAEIFI 887
Query: 1044 RPKDRAEESDAAREKFFVQESDHL 1067
P+++A AA+E ++ +D +
Sbjct: 888 -PENQAIPQLAAKEDDAIRTNDDI 910
Score = 99 (39.9 bits), Expect = 7.8e-77, Sum P(4) = 7.8e-77
Identities = 20/58 (34%), Positives = 36/58 (62%)
Query: 1059 FFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQLLDILKTLKIP 1116
F +SD + +L V ++ H+ WCE H++ K L++A+++R Q++ +LKT IP
Sbjct: 932 FLDDKSDAIKMLQVLGEFA-HEPTEKWCESHFVRFKVLKEAQKLRQQIVQLLKT-NIP 987
Score = 47 (21.6 bits), Expect = 6.0e-32, Sum P(3) = 6.0e-32
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 573 AKSKTLAEQRQYLPIFSVRDELLQVIRENQ 602
A S+ L E+R LP + R+ELL RE +
Sbjct: 115 ALSQALNEERAGLPGNATREELLYEKREER 144
Score = 43 (20.2 bits), Expect = 2.0e-39, Sum P(3) = 2.0e-39
Identities = 14/44 (31%), Positives = 18/44 (40%)
Query: 1009 LDPPLAKMLLMGEQL---GCLDEVLTIVSMLSVPSVFFRPKDRA 1049
LD P K + +Q+ G +D V P FRP RA
Sbjct: 998 LDAPTEKQVKALKQMVAAGFIDRVAIRADKAPTPPTQFRPPRRA 1041
Score = 39 (18.8 bits), Expect = 4.1e-31, Sum P(3) = 4.1e-31
Identities = 10/36 (27%), Positives = 14/36 (38%)
Query: 231 RSDWDDGRWEWEDTPRREGYSNSSKRYQPSPSPMFV 266
+ D+DDG D E + + PS M V
Sbjct: 642 QDDYDDGEGSEGDENEEEEFKIEEEEAGTGPSRMHV 677
Score = 38 (18.4 bits), Expect = 7.8e-77, Sum P(4) = 7.8e-77
Identities = 49/226 (21%), Positives = 79/226 (34%)
Query: 328 SSQSFEDG--VADETYSEEHNYEITESMRLEMEYNSDRAWYDREEGTTMFDTDSSSFILG 385
+++ FE+G D + E + E+ RL+ R++G + +
Sbjct: 21 AARQFEEGQDAVDAAETPEGGHVAAETARLKANL--------RDKGLPVSAKKAKRLEKY 72
Query: 386 DDASYQKKEV-ELAKRLVRKDGSRMSLAQSKKLSQITADNHQW------EERQLLRSGAV 438
+A +K+E EL +L + SK L Q Q EER L A
Sbjct: 73 IEAKLKKEENRELLAKLAANKVDTSLFSSSKTLGQTRQTKRQALSQALNEERAGLPGNAT 132
Query: 439 RGTELSTEFDDEEEHKVILLVHDTKPPFLDGRIVFTKQAEPVMPIKD---PTSDMAIISR 495
R EL ++ EE V D + D Q +P + + P +D +
Sbjct: 133 R-EELL--YEKREERNV----SDQEE---DSESEAQAQPKPDVLVSSTTAPAADSKTTTA 182
Query: 496 KGSALVREIREKQTQNKSRQRFWELAGSQMGNILGVKKTAEQVDAD 541
GS L R + Q+ + G + L K E D+D
Sbjct: 183 AGSGLKRPLEVDDDGRPVIQKRQKRGGVKTKVSLAPKPPVESSDSD 228
Score = 37 (18.1 bits), Expect = 6.5e-31, Sum P(3) = 6.5e-31
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 572 FAKSKTLAEQRQYLPIFSVRDELLQVIRENQ 602
F+ SKTL + RQ + R L Q + E +
Sbjct: 99 FSSSKTLGQTRQ-----TKRQALSQALNEER 124
>UNIPROTKB|G4NBP1 [details] [associations]
symbol:MGG_00523 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase PRP2" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CM001235 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 RefSeq:XP_003718533.1 EnsemblFungi:MGG_00523T0
GeneID:2674513 KEGG:mgr:MGG_00523 Uniprot:G4NBP1
Length = 803
Score = 563 (203.2 bits), Expect = 1.0e-76, Sum P(4) = 1.0e-76
Identities = 150/505 (29%), Positives = 241/505 (47%)
Query: 732 KLIVTSATLNAQKFSDFFGSVP----------------IFHIPGRTFPVNTLYSKTPCED 775
K++ SAT N + +FF S+P I GR FPV ++S P
Sbjct: 302 KVVAMSATANIETLENFF-SIPQDDRKAKAESDGKAEQTLKIEGRQFPVEIIHSPKPVPV 360
Query: 776 YVEAAVKQAMTIHITSP-PGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLIL 834
+ VK IH P PGDIL+F+ GQ+ IE ++ +E+ ++ +VP++ L
Sbjct: 361 LADEVVKTVFKIHCGEPLPGDILVFLYGQEPIEE----IQRLIEEYAATLASDVPKIKAL 416
Query: 835 PIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMG 894
P++ QL + Q F K RK ++ATNIAETS+TV G+ YVIDTG KMK Y +G
Sbjct: 417 PLFGQLSMEAQHTAFRPLKGRVRKVVLATNIAETSVTVPGVRYVIDTGKSKMKQYRASLG 476
Query: 895 MDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVX 954
+++L V +S CYRLYTE Y EM + +PEI R N+
Sbjct: 477 LESLLVDAISKSSAIQRAGRAGREAPGKCYRLYTEDVY-KEMRDADLPEILRNNVREAAL 535
Query: 955 XXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLA 1014
F MD P + +M QL +LGA+++ GA+T+LG KM P+ PL
Sbjct: 536 IMMARGVDDLLTFPLMDTPKISRMEKAMVQLNILGAIDDEGAITELGKKMARLPVAAPLG 595
Query: 1015 KMLLMGEQ--LGCLDEVLTIVSMLSVPSVFF---RPKDRAEESDAAREKFFVQESDHLTL 1069
++LL CL EV+ I+S +S F + ++ EE + R + +E D +
Sbjct: 596 RVLLAAASPAYDCLLEVIDIISCISGGDDIFHQLQSEEAREEVEEYRRELRRREGDLMVY 655
Query: 1070 LYVYQQWK-EHQYRGDWCEEHYLHVKSLRKAREVRSQLLDI-----LKTLKIP------L 1117
L Q + E+ R +WC++ ++++++R+A +R QL + + T K P +
Sbjct: 656 LTTMQMYTAENSDRTEWCKKRKINLRTMRQALNIRRQLRSLCVSEGMLTEKPPPDPQPFV 715
Query: 1118 TSSGHDFDVVRKAICSAYFHNAARLKGVGEYINCRNGMPCHLHPSSAIYGLGYTPEYVVY 1177
S + + K + + A L Y+ + +HPSS+++G E +++
Sbjct: 716 PLSPEAAETITKCFMKGFCTSTAMLAPDLSYVTSQGKHVVAIHPSSSLHG--QKKEAIMF 773
Query: 1178 HELILTTKEYMQCATAVEPQWLSEL 1202
E + T K Y + ++ W+ E+
Sbjct: 774 LEHVFTQKSYAKKVAVIQSVWIPEV 798
Score = 212 (79.7 bits), Expect = 1.0e-76, Sum P(4) = 1.0e-76
Identities = 54/143 (37%), Positives = 80/143 (55%)
Query: 631 GIVGCTQPRRVAAMSVAKRVSEEMDTEL------GDK-------VGYAIRFEDVTGPSTL 677
G++ TQPRRVAA ++A RV+ E T L G K VGY++RF+ T
Sbjct: 181 GMIAVTQPRRVAATTLAHRVAREAGTPLQPSGTSGAKPGAAEGLVGYSVRFDHNVPKGTK 240
Query: 678 IKYMTDGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRD------- 730
IK++T+G+LL+E L D L +Y +V+DE HER + D+L G LK+++
Sbjct: 241 IKFLTEGMLLQELLHDPSLRQYSAVVVDEVHERGIDVDLLCGFLKQMLLSPDKPGRGGLP 300
Query: 731 FKLIVTSATLNAQKFSDFFGSVP 753
K++ SAT N + +FF S+P
Sbjct: 301 LKVVAMSATANIETLENFF-SIP 322
Score = 101 (40.6 bits), Expect = 1.0e-76, Sum P(4) = 1.0e-76
Identities = 29/91 (31%), Positives = 47/91 (51%)
Query: 543 AVVGEQGEIDFREDAKFSQHMKKGEAVSDFAKSK--------TLAEQRQYLPIFSVRDEL 594
AV G+ + D +D+ S +K A A SK +L R+ LPI+ + +
Sbjct: 67 AVPGKNAQKDDSKDSLLSVPSRKKSATGRGASSKPIQAKGDPSLLPLRKALPIWQHQGAI 126
Query: 595 LQVIRENQXXXXXGETGSGKTTQLTQYLLED 625
+ +R+N GETGSGK+TQ+ Q+L ++
Sbjct: 127 REHLRKNDVLILVGETGSGKSTQVPQFLADE 157
Score = 39 (18.8 bits), Expect = 1.0e-76, Sum P(4) = 1.0e-76
Identities = 17/53 (32%), Positives = 23/53 (43%)
Query: 399 KRLVRKDGSRMSLAQSKKLSQITADNHQWEERQLLRSGAVRGTELSTEFDDEE 451
KR K G + L +K +S N + +Q A GTE + DDEE
Sbjct: 8 KRKKDKSGPAIRLPGNKTISLDGFLNGVPKPKQAETKEAP-GTEKEVKHDDEE 59
Score = 39 (18.8 bits), Expect = 5.4e-17, Sum P(4) = 5.4e-17
Identities = 7/25 (28%), Positives = 15/25 (60%)
Query: 1219 HKKKQKESKTAMEEEMENLRKIQAD 1243
H+ + +E++ +EE LR+ + D
Sbjct: 627 HQLQSEEAREEVEEYRRELRRREGD 651
>TAIR|locus:2039280 [details] [associations]
symbol:AT2G35920 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006499
"N-terminal protein myristoylation" evidence=RCA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CP002685 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K14442 OMA:RIRNRSY IPI:IPI00520060
RefSeq:NP_850255.1 UniGene:At.27892 ProteinModelPortal:F4ILR7
SMR:F4ILR7 PRIDE:F4ILR7 EnsemblPlants:AT2G35920.1 GeneID:818165
KEGG:ath:AT2G35920 Uniprot:F4ILR7
Length = 995
Score = 443 (161.0 bits), Expect = 1.3e-76, Sum P(3) = 1.3e-76
Identities = 127/448 (28%), Positives = 213/448 (47%)
Query: 775 DYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLIL 834
D VEA ++ + G IL+F+TG DEI K M + +++ L+L
Sbjct: 488 DLVEATIEHICRLE---GGGAILVFLTGWDEISK--LLEKINMNNFLGDSSK----FLVL 538
Query: 835 PIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMG 894
P++ +P Q +IF++ RK ++ATNIAE+S+T+D + YV+D G K Y+
Sbjct: 539 PLHGSMPTVNQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNK 598
Query: 895 MDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPS-PVPEIQRTNLGNVV 953
+ L +S CYRLY + Y + P +PEI RT L +
Sbjct: 599 VACLLPSWISKASAHQRRGRAGRVQAGVCYRLYPKVIY--DAFPQYQLPEIIRTPLQELC 656
Query: 954 XXXXXXXXXXXXXF--DFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDP 1011
F + PP + N++ L +GALN+V LT LG + P+DP
Sbjct: 657 LHIKSLQVGSIGSFLAKALQPPDALAVENAIELLKTIGALNDVEELTPLGRHLCTLPVDP 716
Query: 1012 PLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAAREKFFVQES--DHLTL 1069
+ KMLL+G C++ LTI + L+ S F P +R EE+D A+ ++F +S DH+ L
Sbjct: 717 NIGKMLLIGAIFQCVNPALTIAAALAYRSPFVLPLNRKEEADEAK-RYFAGDSCSDHIAL 775
Query: 1070 LYVYQQWKEHQYRG---DWCEEHYLHVKSLRKAREVRSQLLDILKTLKIPLTSS------ 1120
L Y+ +++ + G D+C +++L +LR ++R+Q LD+L + S
Sbjct: 776 LKAYEGYRDAKRGGNEKDFCWQNFLSPVTLRMMEDMRNQFLDLLSDIGFVDKSKPNAYNQ 835
Query: 1121 -GHDFDVVRKAICSAYFHNAARLKGVGE---YINCRNGMPCHLHPSSAIYGLG-YTPEYV 1175
+D +++ +C+ + N + K G+ + G +HP S + ++ Y+
Sbjct: 836 YSYDMEMISAVLCAGLYPNVVQCKRRGKRTAFYTKELGK-VDIHPGSVNARVNLFSLPYL 894
Query: 1176 VYHELILTTKEYMQCATAVEPQWLSELG 1203
VY E + TT Y++ +T + L G
Sbjct: 895 VYSEKVKTTSVYIRDSTNISDYALLMFG 922
Score = 429 (156.1 bits), Expect = 1.3e-76, Sum P(3) = 1.3e-76
Identities = 93/222 (41%), Positives = 134/222 (60%)
Query: 552 DFREDAKFSQHMKKGEAVSDFAKS-KTLAEQRQYLPIFSVRDELLQVIRENQXXXXXGET 610
D E KFS +K+ + +S K L R+ LP F +++E L + +NQ GET
Sbjct: 194 DSLEKEKFSFALKERQEKLKATESVKALKAFREKLPAFKMKEEFLNSVSQNQVLVVSGET 253
Query: 611 GSGKTTQLTQYLLEDGYTT-NGI---VGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAI 666
G GKTTQL Q++LE+ ++ G + CTQPRR++A+SVA R+S E +G+ VGY I
Sbjct: 254 GCGKTTQLPQFILEEEISSLRGADCNIICTQPRRISAISVASRISAERGESIGESVGYQI 313
Query: 667 RFEDVTGPSTLIKYMTDGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVA 726
R E T + + T GVLLR ++D +L +++DE HER ++ D L IL+ ++
Sbjct: 314 RLESKRSDQTRLLFCTTGVLLRRLIEDPNLTNVSHLLVDEIHERGMNEDFLLIILRDLLP 373
Query: 727 RRRDFKLIVTSATLNAQKFSDFFGSVPIFHIPGRTFPVNTLY 768
RR D +LI+ SAT+NA FS +FG+ P HIPG TFPV L+
Sbjct: 374 RRPDLRLILMSATINADMFSTYFGNSPTMHIPGFTFPVAELF 415
Score = 40 (19.1 bits), Expect = 1.3e-76, Sum P(3) = 1.3e-76
Identities = 15/63 (23%), Positives = 26/63 (41%)
Query: 392 KKEVELAKRLVRKDGSRMSLAQSKKLSQITADNHQWEERQLLRSGAVRGTELSTEFDDEE 451
+KE++++ RK GS + Q S +A ++ + G R S D E
Sbjct: 138 QKEIKMSTETERKLGSLLKTTQESGSSGASASAFNDQQDRTSTLGLKRPDSASKLPDSLE 197
Query: 452 EHK 454
+ K
Sbjct: 198 KEK 200
>TAIR|locus:2125211 [details] [associations]
symbol:AT4G01020 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR002867
InterPro:IPR004087 InterPro:IPR007087 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF01485 Pfam:PF04408 PROSITE:PS00028 PROSITE:PS00690
PROSITE:PS50089 PROSITE:PS50157 PROSITE:PS51194 SMART:SM00184
SMART:SM00322 SMART:SM00355 SMART:SM00490 SMART:SM00647
SMART:SM00847 Pfam:PF00097 Prosite:PS00518 GO:GO:0005524
GO:GO:0009507 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0003723 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 HSSP:P38398 GO:GO:0008026
EMBL:AL161491 EMBL:AL080237 KO:K12818 PIR:T10542 IPI:IPI00547897
RefSeq:NP_567206.1 UniGene:At.42970 ProteinModelPortal:P0CE10
SMR:P0CE10 PRIDE:P0CE10 EnsemblPlants:AT4G01020.1 GeneID:826439
KEGG:ath:AT4G01020 GeneFarm:1806 TAIR:At4g01020
HOGENOM:HOG000084497 PhylomeDB:P0CE10 Uniprot:P0CE10
Length = 1787
Score = 812 (290.9 bits), Expect = 3.8e-76, Sum P(3) = 3.8e-76
Identities = 223/679 (32%), Positives = 335/679 (49%)
Query: 585 LPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNGIVGCTQPRRVAAM 644
LPI++ R ++L+ I Q GETGSGK+TQL Q+L + G + + CTQPR++AAM
Sbjct: 303 LPIYAYRRQILKKIHCEQIMVLIGETGSGKSTQLVQFLADSGVAASESIVCTQPRKIAAM 362
Query: 645 SVAKRVSEEMDTELGDK-VGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDSDLDKYRVIV 703
++ RV EE + V F S+ + YMTD LL+ +KD L ++
Sbjct: 363 TLTDRVREESSGCYEENTVSCTPTFSSTEEISSKVVYMTDNCLLQHYMKDRSLSGISCVI 422
Query: 704 MDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPIFHIPGRTFP 763
+DEAHERSL+TD+L +L+K+++RR D +L++ SAT +A + S + I H+ GR FP
Sbjct: 423 IDEAHERSLNTDLLLALLRKLLSRRIDLRLVIMSATADANQLSQYLFDCGILHVNGRNFP 482
Query: 764 VNTLYSKTPCED---------YVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALK 814
V +YS + E+ Y VK A+ IH T G IL F+T Q E+E AC
Sbjct: 483 VEIVYSPSGTEENSVVGRIASYAGDVVKMAVEIHKTEKEGTILAFLTSQAEVEWAC---- 538
Query: 815 ERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDG 874
E+ ++ P + LP++ +L + Q +F+ G RK I ATNIAETSLT+ G
Sbjct: 539 ---ERFVA------PSAIALPLHGKLSFEEQFMVFQNYP-GRRKVIFATNIAETSLTIPG 588
Query: 875 IFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLN 934
+ YVID+G K Y P+ GM L+V VS CYRLY+++ + +
Sbjct: 589 VKYVIDSGMVKESKYEPRTGMSILKVCQVSQSSARQRAGRAGRTEPGRCYRLYSKTDF-D 647
Query: 935 EMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGAL--- 991
M + PEI+R +LG + F+F+D P E I ++ L LGA+
Sbjct: 648 SMNLNQEPEIRRVHLGVALLRMLALGIDNIAAFEFVDAPVPEAIAMAIQNLVQLGAVVEK 707
Query: 992 NNVGALTDLGWKMVEFPLDPPLAKMLL--MGEQLGCLDEVLTIVSMLSVPSVFFRPK--D 1047
N V LT G +V+ L+P L K++L ++G VL V M + S+F R D
Sbjct: 708 NGVLELTQEGHCLVKLGLEPKLGKLILGCFRHRMGKEGIVLAAV-MANASSIFCRVGNFD 766
Query: 1048 RAEESDAAREKFFVQESDHLTLLYVYQQWKE--HQYRGDWCEEHYLHVKSLRKAREVRSQ 1105
++D + +F D TLL VY++W R WC E+ L+ KS+R+ + +
Sbjct: 767 DKMKADRLKVQFCNDNGDLFTLLSVYKEWASLPRDRRNKWCWENSLNAKSMRRCEDTVKE 826
Query: 1106 L-LDILKTLKI---------PLTSSGHDFDVVRKAICSAYFHNAARLKGVGE--YINCRN 1153
L + I + L + P + HD ++ I ++ N A G + Y
Sbjct: 827 LEICIERELTLVSPSYWVWNPNEGTKHD-KYLKMVILASLAENVAMYTGYDQLGYEVALT 885
Query: 1154 GMPCHLHPSSAIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMF-FSVKDS 1212
LHPS ++ G P +VV+ EL+ +Y+ C TA + + L L P F
Sbjct: 886 SQQVQLHPSCSLLAFGQKPSWVVFGELLSIVDQYLVCVTAFDFEALYMLDPPPPFDASQM 945
Query: 1213 DTSMLEHKKKQKESKTAME 1231
D L KK S T ++
Sbjct: 946 DERRLRVKKVVGCSSTVLK 964
Score = 41 (19.5 bits), Expect = 3.8e-76, Sum P(3) = 3.8e-76
Identities = 22/75 (29%), Positives = 32/75 (42%)
Query: 508 QTQNKSRQRFWELAGSQMGNILGVKKTAEQVDADTAVVGEQGEIDFREDAKFSQHMKKGE 567
+ +++ R F S M N GVKK ++D D + R+ A FS K+G
Sbjct: 174 ELKDRLRDLFSSHVLSLMENGQGVKKVRMEID-DKS----------RQVASFSS--KRGL 220
Query: 568 AVSDFAKSKTLAEQR 582
F K K L +R
Sbjct: 221 KFEVFEKKKALEAER 235
Score = 39 (18.8 bits), Expect = 3.8e-76, Sum P(3) = 3.8e-76
Identities = 11/41 (26%), Positives = 17/41 (41%)
Query: 194 SKGRYRGREARDRDEPEYGGEYGRKRSKYDGTRRTPG-RSD 233
S RY R A+ + + ++ S+Y T P R D
Sbjct: 26 STNRYNSRSAQSSPPLNHCTTWNQQHSQYHNTNFPPNYRRD 66
>CGD|CAL0004556 [details] [associations]
symbol:orf19.2090 species:5476 "Candida albicans" [GO:0030686
"90S preribosome" evidence=IEA] [GO:0032040 "small-subunit
processome" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0000462 "maturation
of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 CGD:CAL0004556 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AACQ01000031
EMBL:AACQ01000030 KO:K14780 RefSeq:XP_719536.1 RefSeq:XP_719660.1
STRING:Q5ACX7 GeneID:3638741 GeneID:3638820 KEGG:cal:CaO19.2090
KEGG:cal:CaO19.9637 Uniprot:Q5ACX7
Length = 1263
Score = 464 (168.4 bits), Expect = 7.2e-76, Sum P(4) = 7.2e-76
Identities = 117/310 (37%), Positives = 174/310 (56%)
Query: 532 KKTAEQVDADTAVVGEQGEIDFREDAKFSQHMKKGEAVSDFAKSKTLAEQRQYLPIFSVR 591
K+T D D + E+G I ++ M++ V + ++ ++ +QR LP+F+
Sbjct: 397 KQTVRDEDVDHSS-DEEGYIPINKE------MQRRAFVVEVNRTDSIQQQRALLPVFAEE 449
Query: 592 DELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTT------NGIVGCTQPRRVAAMS 645
+++ + + GETGSGKTTQ+ Q+L E G+ G++G TQPRRVAA+S
Sbjct: 450 HRIMEAVYHHDCIILCGETGSGKTTQVPQFLYEAGFGNLLHDLYPGMIGVTQPRRVAAVS 509
Query: 646 VAKRVSEEMDTELGDKVGYAIRFEDVT---GPS--TLIKYMTDGVLLRETLKDSDLDKYR 700
+A+RV E+ G +VGY IRF+ G T +K+MTDGVLLRE + D L KY
Sbjct: 510 MAERVGSELGDH-GHRVGYQIRFDTTIKNEGKENGTALKFMTDGVLLREMMTDFLLAKYS 568
Query: 701 VIVMDEAHERSLSTDVLFGILKKVVARRRDF-----------KLIVTSATLNAQKFSD-- 747
I++DEAHER+++TD+L G+L +VV RR + KLI+ SATL FS+
Sbjct: 569 AIIIDEAHERNINTDILIGMLTRVVKLRRKYHKENPQLYKPLKLIIMSATLRVSDFSENP 628
Query: 748 --FFGSVPIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDE 805
F PI ++ R +PV+ ++K DY+E A K+ IH P G ILIF+TGQ+E
Sbjct: 629 ALFKTPPPIINVQARQYPVSIHFNKKTNYDYLEEAFKKTCKIHRKLPEGGILIFLTGQNE 688
Query: 806 IEAACFALKE 815
I L++
Sbjct: 689 ITTLVKKLRQ 698
Score = 384 (140.2 bits), Expect = 7.2e-76, Sum P(4) = 7.2e-76
Identities = 95/249 (38%), Positives = 128/249 (51%)
Query: 814 KERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVD 873
+E E+ I S EV L +LP+YS LP Q K+FE G+R CIVATN+AETSLT+
Sbjct: 754 EEGFEESIDSKESEVGPLYVLPLYSLLPTKQQMKVFEDPPPGSRICIVATNVAETSLTIP 813
Query: 874 GIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYL 933
GI YV+D G K + YN + G+ + +V VS CYRLY+ SA
Sbjct: 814 GIRYVVDCGRSKERKYNQENGVQSFEVDWVSKASANQRAGRAGRTGPGHCYRLYS-SAVF 872
Query: 934 NEMLPS-PVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALN 992
+ P VPEI R ++V F F PP + ++ + L +LGAL+
Sbjct: 873 EDFFPQFSVPEILRMPFESIVLSMKSMGIDQIANFPFPTPPDRFSLKKAEELLVILGALD 932
Query: 993 NVGA-LTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEE 1051
+TDLG KM FPL P AK+L++G Q CL ++ IVS LSV F +
Sbjct: 933 KEQKQITDLGKKMSLFPLSPRFAKILIIGNQQECLSYIIAIVSALSVGDPFIGENELVGN 992
Query: 1052 -SDAAREKF 1059
+D AR +F
Sbjct: 993 MNDEARREF 1001
Score = 128 (50.1 bits), Expect = 3.1e-49, Sum P(4) = 3.1e-49
Identities = 40/134 (29%), Positives = 67/134 (50%)
Query: 997 LTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEE--SDA 1054
+TDLG KM FPL P AK+L++G Q CL ++ IVS LSV F + +A
Sbjct: 938 ITDLGKKMSLFPLSPRFAKILIIGNQQECLSYIIAIVSALSVGDPFIGENELVGNMNDEA 997
Query: 1055 ARE---KFF--------VQESDHLTLLY----VYQQWKEHQYRGDWCEEHYLHVKSLRKA 1099
RE KF+ + S + +L Y + + G + ++HYL K + +
Sbjct: 998 RREFRTKFYHSRALFSKLDASSNCMMLLSAVCAYDHVPKEEQNG-FLQKHYLRHKMMEEI 1056
Query: 1100 REVRSQLLDILKTL 1113
+++R Q+ +I++ +
Sbjct: 1057 QKLRKQVGNIVENM 1070
Score = 61 (26.5 bits), Expect = 7.2e-76, Sum P(4) = 7.2e-76
Identities = 33/148 (22%), Positives = 60/148 (40%)
Query: 76 AASIDEEEKSESSGIDEVVSNATNGKRSHASRRYRETSARDITDAENPMAVGRAGETAGT 135
A+S ++EE+S++S D++ N T+ + A R++ + +D+ + AG
Sbjct: 261 ASSSEDEEESDNSNADDM--N-TSEETVEADE-LRDSDVAEDSDSNEEESEHEINPEAG- 315
Query: 136 HRSNEHAYVEXXXXXXXXXXXXXXXXRHDRDDRGSERKYLKDDTRSESRGPSRRDNYDSK 195
E A E D ++ E K +K R + S ++ + +
Sbjct: 316 ----ESAESEGDSSSEVEEEEDDDDDDDDEEEEEEESKLMKSKPRHSTTAASFKEWAEQQ 371
Query: 196 GRYRGREARDRD--EPEYGGEYGRKRSK 221
R E RD++ PE E +K SK
Sbjct: 372 VRIM--EGRDKNVLTPEVSEEIKKKYSK 397
Score = 48 (22.0 bits), Expect = 7.2e-76, Sum P(4) = 7.2e-76
Identities = 11/24 (45%), Positives = 14/24 (58%)
Query: 1158 HLHPSSAIYGLGYTPE-YVVYHEL 1180
+LHP+S I G P Y+VY L
Sbjct: 1145 YLHPNSLIAESGQIPSSYLVYQSL 1168
Score = 46 (21.3 bits), Expect = 2.7e-74, Sum P(4) = 2.7e-74
Identities = 18/67 (26%), Positives = 36/67 (53%)
Query: 372 TTMFDT-DSSSFILGDDASYQK--KEVELAKRLVRKDGSR--MSLAQSKKLSQITADNHQ 426
T +F+T DS+S IL ++ ++ L + L ++ + MS A+ K+L + +
Sbjct: 47 TEIFNTQDSNSEILAPVTEEERLARKRALEQNLYSENSKKEKMSRAKKKRLDKYIDHQLK 106
Query: 427 WEERQLL 433
EE+++L
Sbjct: 107 REEKKIL 113
Score = 44 (20.5 bits), Expect = 4.3e-74, Sum P(4) = 4.3e-74
Identities = 28/134 (20%), Positives = 55/134 (41%)
Query: 325 SRESSQSFEDGVADETYSEEHNYEITESMRLEMEYNSDRAWYDREEGTTMFDTDSSSFIL 384
S E + ++ AD+ + E E E ++ +SD + E + S+
Sbjct: 263 SSEDEEESDNSNADDMNTSEETVEADELRDSDVAEDSDSNEEESEHEINP-EAGESAESE 321
Query: 385 GDDASYQKKEVELAKRL--VRKDGSRMSLAQSKKLSQITADNH-QWEERQL-LRSGAVRG 440
GD +S ++E + ++ L +SK TA + +W E+Q+ + G +
Sbjct: 322 GDSSSEVEEEEDDDDDDDDEEEEEEESKLMKSKPRHSTTAASFKEWAEQQVRIMEGRDKN 381
Query: 441 TELSTEFDDEEEHK 454
L+ E +E + K
Sbjct: 382 V-LTPEVSEEIKKK 394
Score = 43 (20.2 bits), Expect = 2.0e-40, Sum P(4) = 2.0e-40
Identities = 14/74 (18%), Positives = 29/74 (39%)
Query: 927 YTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLW 986
+ + YL + + ++ R +GN+V P P + +++M Q+
Sbjct: 1042 FLQKHYLRHKMMEEIQKL-RKQVGNIVENMIMSADGLQLEQKVKLPIPNKKQVSAMKQMI 1100
Query: 987 VLGALNNVGALTDL 1000
G ++ V DL
Sbjct: 1101 ASGFIDQVAIRGDL 1114
Score = 39 (18.8 bits), Expect = 1.1e-39, Sum P(3) = 1.1e-39
Identities = 10/39 (25%), Positives = 21/39 (53%)
Query: 1201 ELGPMFFSVKDSDTSML---EHKKKQKESKTAMEEEMEN 1236
E+ + FSV+ D +L E ++ +E + EE +++
Sbjct: 725 EVEDVDFSVQSGDAGILDDYEEGEENEEEEEGFEESIDS 763
Score = 38 (18.4 bits), Expect = 1.8e-73, Sum P(4) = 1.8e-73
Identities = 13/42 (30%), Positives = 17/42 (40%)
Query: 171 ERKYLK----DDTRSESRGPSRRDNYDSKGRYRGREARDRDE 208
E+K LK DD S S DN ++ E + DE
Sbjct: 248 EKKRLKKEDDDDFASSSEDEEESDNSNADDMNTSEETVEADE 289
>UNIPROTKB|F5H3Y4 [details] [associations]
symbol:DHX37 "Probable ATP-dependent RNA helicase DHX37"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 IPI:IPI00217630 HGNC:HGNC:17210
EMBL:AC093719 ProteinModelPortal:F5H3Y4 SMR:F5H3Y4
Ensembl:ENST00000544745 ArrayExpress:F5H3Y4 Bgee:F5H3Y4
Uniprot:F5H3Y4
Length = 962
Score = 476 (172.6 bits), Expect = 1.6e-75, Sum P(3) = 1.6e-75
Identities = 105/253 (41%), Positives = 159/253 (62%)
Query: 574 KSKTLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTT-NGI 632
+S + E+R LPI S +++ + E+ GETGSGKTTQ+ Q+L E G+++ + I
Sbjct: 28 RSPEMQEERLKLPILSEEQVIMEAVAEHPIVIVCGETGSGKTTQVPQFLYEAGFSSEDSI 87
Query: 633 VGCTQPRRVAAMSVAKRVSEEMDTELGDKV-GYAIRFEDVTGPSTLIKYMTDGVLLRETL 691
+G T+PRRVAA+++++RV++EM+ L +V Y IR+E T IK+MTDGVLL+E
Sbjct: 88 IGVTEPRRVAAVAMSQRVAKEMN--LSQRVVSYQIRYEGNVTEETRIKFMTDGVLLKEIQ 145
Query: 692 KDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVV---ARRR-DFKLIVTSATLNAQKFSD 747
KD L +Y+V+++DEAHERS+ TD+L G+L ++V A+R KL++ SATL + F+
Sbjct: 146 KDFLLLRYKVVIIDEAHERSVYTDILIGLLSRIVTLRAKRNLPLKLLIMSATLRVEDFTQ 205
Query: 748 ----FFGSVPIFHIPGRTFPVNTLYSK-TPCEDYVEAAVKQAMTIHITSPPGDILIFMTG 802
F P+ + R FPV ++K TP EDY ++ IH P G IL+F+TG
Sbjct: 206 NPRLFAKPPPVIKVESRQFPVTVHFNKRTPLEDYSGECFRKVCKIHRMLPAGGILVFLTG 265
Query: 803 QDEIEAACFALKE 815
Q E+ A C L++
Sbjct: 266 QAEVHALCRRLRK 278
Score = 309 (113.8 bits), Expect = 1.6e-75, Sum P(3) = 1.6e-75
Identities = 84/238 (35%), Positives = 116/238 (48%)
Query: 831 LLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYN 890
L +LP+YS L + QA++F+ EGTR C+VATN+AETSLT+ GI YV+D G K + Y+
Sbjct: 375 LHVLPLYSLLAPEKQAQVFKPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRYYD 434
Query: 891 PKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLG 950
G+ + +V VS CYRLY+ SA + P PEI R +
Sbjct: 435 RVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYS-SAVFGDFEQFPPPEITRRPVE 493
Query: 951 NVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGAL--------------NNVGA 996
+++ F F PP E +L + L LGAL N +
Sbjct: 494 DLILQMKALNVEKVINFPFPTPPSVEALLAAEELLIALGALQPPQKAERVKQLQENRLSC 553
Query: 997 -LTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESD 1053
+T LG M FP+ P AKML + Q GCL +TIV+ ++V +F DR SD
Sbjct: 554 PITALGRTMATFPVAPRYAKMLALSRQHGCLPYAITIVASMTVRELF-EELDRPAASD 610
Score = 113 (44.8 bits), Expect = 1.6e-75, Sum P(3) = 1.6e-75
Identities = 22/51 (43%), Positives = 33/51 (64%)
Query: 1156 PCHLHPSSAIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMF 1206
P +HPSS ++ PE+VVY E++ TTK YM+ ++VE QW+ L P +
Sbjct: 750 PVFIHPSSVLFK--ELPEFVVYQEIVETTKMYMKGVSSVEVQWIPALLPSY 798
Score = 37 (18.1 bits), Expect = 4.8e-40, Sum P(2) = 4.8e-40
Identities = 9/28 (32%), Positives = 14/28 (50%)
Query: 1210 KDSDTSMLEHKKKQKESKTAMEEEMENL 1237
KDS M + KK + +K A E + +
Sbjct: 295 KDSVEEMRKFKKSRARAKKARAEVLPQI 322
>TAIR|locus:2008144 [details] [associations]
symbol:AT1G48650 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
EMBL:CP002684 GO:GO:0005524 Gene3D:3.30.160.20 GO:GO:0005622
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K14442
IPI:IPI00938568 RefSeq:NP_001154411.1 UniGene:At.22775
ProteinModelPortal:F4HYJ6 SMR:F4HYJ6 PRIDE:F4HYJ6
EnsemblPlants:AT1G48650.2 GeneID:841287 KEGG:ath:AT1G48650
OMA:GRIAYND Uniprot:F4HYJ6
Length = 1206
Score = 434 (157.8 bits), Expect = 2.2e-75, Sum P(3) = 2.2e-75
Identities = 136/489 (27%), Positives = 232/489 (47%)
Query: 732 KLIVTSATLNAQKFSDFFGSVPIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITS 791
K +++SA +A + +DF G ++ R ++L +P D + + + + HI
Sbjct: 525 KSLISSAVEDALEAADFKG----YNFRTR----DSLSCWSP--DSIGFNLIENVLCHIVK 574
Query: 792 P--PGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIF 849
PG +L+FMTG D+I + LK ++E S + ++L+L + + + Q IF
Sbjct: 575 GERPGAVLVFMTGWDDINS----LKNQLEA--HSLLGDPNKVLLLACHGSMASSEQRLIF 628
Query: 850 EKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXX 909
++ EG RK ++ATN+AETS+T++ + YVID G K Y+ L +S
Sbjct: 629 DRPPEGIRKIVLATNMAETSITINDVVYVIDCGKAKETSYDALNNTPCLLPSWISKAAAR 688
Query: 910 XXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXF-- 967
CY LY Y PE+ RT L ++ F
Sbjct: 689 QRRGRAGRVMPGECYHLYPRCVY-EAFADYQQPELLRTPLQSLCLQIKSLGLGSISEFLS 747
Query: 968 DFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLD 1027
+ PP ++ N++ L ++GAL++ LT LG + P++P L KML++G CLD
Sbjct: 748 RALQPPEALSVQNAVEYLKIIGALDDDENLTPLGKNLSMLPVEPKLGKMLILGAIFNCLD 807
Query: 1028 EVLTIVSMLSVPSVFFRPKDRAEESDAAREKFFVQE-SDHLTLLYVYQQWK--EHQYRG- 1083
V+T+V+ LSV F P D+ + ++ AR KF ++ SDHLTL+ Y WK E + G
Sbjct: 808 PVMTVVAGLSVRDPFLMPFDKKDLAETARSKFSGRDYSDHLTLVRAYNGWKDAERTHSGY 867
Query: 1084 DWCEEHYLHVKSLRKAREVRSQLLDILKTLKIPLTSSG-----HDFDVVRKAICSAYFHN 1138
D+C +++L ++L+ +R Q ++LK + G HD +VR IC+ F
Sbjct: 868 DYCWKNFLSSQTLKAMDSMRKQFFNLLKEASLIDNIEGCSKLSHDEHLVRAIICAGMFPG 927
Query: 1139 AARLKGVGEYINCR---NGMPCHLHPSSAIYGLGYTP-EYVVYHELILTTKEYMQCATAV 1194
+ + I + +G L+ SS + P ++V+++ + +++ +TAV
Sbjct: 928 VCSVVNKEKSITLKTMEDGQVL-LYSSSVNGNVPMIPFPWLVFNDKVKVNSVFLRDSTAV 986
Query: 1195 EPQWLSELG 1203
L G
Sbjct: 987 SDSVLLLFG 995
Score = 428 (155.7 bits), Expect = 2.2e-75, Sum P(3) = 2.2e-75
Identities = 93/215 (43%), Positives = 129/215 (60%)
Query: 571 DFAKSKTLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGY--- 627
D + + + R+ LP + +D LL+ I NQ GETG GKTTQL QY+LE
Sbjct: 285 DSPEGQKMVGFRKTLPAYKEKDALLKAIAANQVVVVSGETGCGKTTQLPQYILESEIEAA 344
Query: 628 --TTNGIVGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGV 685
T I+ CTQPRR++A+SV++RV+ E ++G+ VGY +R E + G T + + T GV
Sbjct: 345 RGATCSII-CTQPRRISAISVSERVAAERGEQIGESVGYKVRLEGMRGRDTRLLFCTTGV 403
Query: 686 LLRETLKDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKF 745
LLR L D L +V+DE HER ++ D L +LK ++ RR D KLI+ SATLNA+ F
Sbjct: 404 LLRRLLVDRSLKGVTHVVVDEIHERGMNEDFLLIVLKDLLPRRPDLKLILMSATLNAELF 463
Query: 746 SDFFGSVPIFHIPGRTFPVNTLYSKTPCEDYVEAA 780
S +FG P HIPG T+PV + EDY+E +
Sbjct: 464 SSYFGGAPAMHIPGFTYPVRAHF----LEDYLETS 494
Score = 44 (20.5 bits), Expect = 2.2e-75, Sum P(3) = 2.2e-75
Identities = 12/39 (30%), Positives = 23/39 (58%)
Query: 498 SALVRE--IREKQTQNKSRQRFWELAGSQMGNILGVKKT 534
++L RE +R + Q KS+Q+ W + + ++G +KT
Sbjct: 261 NSLARERILRPRSLQLKSKQQQW-VDSPEGQKMVGFRKT 298
>UNIPROTKB|E1BNQ2 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 KO:K14780 CTD:57647 EMBL:DAAA02045204
IPI:IPI00698261 RefSeq:NP_001192890.1 UniGene:Bt.8113 PRIDE:E1BNQ2
Ensembl:ENSBTAT00000027206 GeneID:529207 KEGG:bta:529207
OMA:ANCRDAL NextBio:20874985 Uniprot:E1BNQ2
Length = 1155
Score = 485 (175.8 bits), Expect = 4.4e-75, Sum P(3) = 4.4e-75
Identities = 109/268 (40%), Positives = 160/268 (59%)
Query: 574 KSKTLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTT-NGI 632
+S + E+R LPI S +++ + E+ GETGSGKTTQ+ Q+L E GY++ N +
Sbjct: 239 RSPEMQEERLKLPILSEEQVIMEAVAEHPIVIICGETGSGKTTQVPQFLYEAGYSSDNSV 298
Query: 633 VGCTQPRRVAAMSVAKRVSEEMDTELGDKV-GYAIRFEDVTGPSTLIKYMTDGVLLRETL 691
+G T+PRRVAA+++++RV++EM+ L +V Y IR+E T IK+MTDGVLL+E
Sbjct: 299 IGVTEPRRVAAVAMSQRVAKEMN--LSPRVVSYQIRYEGNVTEETRIKFMTDGVLLKEIQ 356
Query: 692 KDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRD----FKLIVTSATLNAQKFSD 747
KD L KY+V+++DEAHERS+ TD+L G+L ++V R KL++ SATL + F+
Sbjct: 357 KDFLLLKYKVVIIDEAHERSVYTDILIGLLSRIVCLREKRHLPLKLLIMSATLRVEDFTQ 416
Query: 748 ----FFGSVPIFHIPGRTFPVNTLYSK-TPCEDYVEAAVKQAMTIHITSPPGDILIFMTG 802
F P+ + R FPV ++K TP EDY ++ IH P G IL+F+TG
Sbjct: 417 NQRLFTQPPPVIKVESRQFPVTVHFNKRTPLEDYSGECFRKVCKIHRMLPAGGILVFLTG 476
Query: 803 QDEIEAACFALKERMEQLISSTTREVPE 830
Q E+ A C R+ + T PE
Sbjct: 477 QAEVHALC----RRLRRAFPLTRHRPPE 500
Score = 306 (112.8 bits), Expect = 4.4e-75, Sum P(3) = 4.4e-75
Identities = 84/238 (35%), Positives = 116/238 (48%)
Query: 831 LLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYN 890
L +LP+YS L + QA++F+ EGTR C+VATN+AETSLT+ GI YV+D G K + Y+
Sbjct: 586 LHVLPLYSLLAPEKQAQVFQPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRHYD 645
Query: 891 PKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLG 950
G+ + +V VS CYRLY+ SA + P PEI R +
Sbjct: 646 RVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYS-SAVFGDFEKYPPPEITRRPVE 704
Query: 951 NVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALN------NVGAL------- 997
+++ F F PP E ++ + L LGAL V L
Sbjct: 705 DLILQMKALNIEKVINFPFPTPPSVEALIAAEELLIALGALQAPPKTERVKQLQRSRLSC 764
Query: 998 --TDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESD 1053
T+LG M FP+ P AKML + Q GCL +TIV+ ++V +F DR SD
Sbjct: 765 PITELGRTMATFPVAPRYAKMLALSRQHGCLPYTITIVAAMTVRELF-EELDRPAASD 821
Score = 108 (43.1 bits), Expect = 4.4e-75, Sum P(3) = 4.4e-75
Identities = 21/51 (41%), Positives = 32/51 (62%)
Query: 1156 PCHLHPSSAIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMF 1206
P +HPSS ++ PE+VVY E++ TTK YM+ + V+ QW+ L P +
Sbjct: 961 PVFIHPSSVLFK--ELPEFVVYQEIVETTKMYMKGVSTVDMQWIPVLLPSY 1009
>UNIPROTKB|E2RHZ3 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 KO:K14780 CTD:57647 OMA:AKLQPRT
EMBL:AAEX03014623 RefSeq:XP_534640.2 Ensembl:ENSCAFT00000011159
GeneID:477442 KEGG:cfa:477442 NextBio:20852918 Uniprot:E2RHZ3
Length = 1149
Score = 481 (174.4 bits), Expect = 4.5e-75, Sum P(3) = 4.5e-75
Identities = 108/268 (40%), Positives = 162/268 (60%)
Query: 574 KSKTLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTT-NGI 632
++ + E+R LPI + +++ + E+ GETGSGKTTQ+ Q+L E GY++ N I
Sbjct: 235 RTPEMQEERLKLPILAEEQVIMEAVAEHPIVIVCGETGSGKTTQVPQFLYEAGYSSDNSI 294
Query: 633 VGCTQPRRVAAMSVAKRVSEEMDTELGDKV-GYAIRFEDVTGPSTLIKYMTDGVLLRETL 691
+G T+PRRVAA+++++RV++EM+ L +V Y IR+E T IK+MTDGVLL+E
Sbjct: 295 IGITEPRRVAAVAMSQRVAKEMN--LSQRVVSYQIRYEGNVTEETRIKFMTDGVLLKEIQ 352
Query: 692 KDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVA----RRRDFKLIVTSATLNAQKFSD 747
KD L +Y+V+++DEAHERS+ TD+L G+L ++V+ R KL++ SATL + F+
Sbjct: 353 KDFLLLRYKVVLIDEAHERSVYTDILIGLLSRIVSLRAKRHLPLKLLIMSATLRVEDFTQ 412
Query: 748 ----FFGSVPIFHIPGRTFPVNTLYSK-TPCEDYVEAAVKQAMTIHITSPPGDILIFMTG 802
F P+ + R FPV ++K TP EDY ++ IH P G IL+F+TG
Sbjct: 413 NQRLFPQPPPVIKVESRQFPVTVHFNKRTPLEDYSGECFRKVCKIHRMLPAGGILVFLTG 472
Query: 803 QDEIEAACFALKERMEQLISSTTREVPE 830
Q E+ A C R+ + T R PE
Sbjct: 473 QAEVHALC----RRLRRAFPHTRRRPPE 496
Score = 305 (112.4 bits), Expect = 4.5e-75, Sum P(3) = 4.5e-75
Identities = 83/238 (34%), Positives = 117/238 (49%)
Query: 831 LLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYN 890
L +LP+YS L + QA++F+ EGTR C+VATN+AETSLT+ GI YV+D G K + Y+
Sbjct: 582 LHVLPLYSLLAPEKQAQVFQPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRHYD 641
Query: 891 PKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLG 950
G+ + +V VS CYRLY+ SA ++ P PEI R +
Sbjct: 642 RVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYS-SAVFSDFEQFPPPEITRRPVE 700
Query: 951 NVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNN--------------VGA 996
+++ F F PP E ++ + L LGAL +G
Sbjct: 701 DLILQMKALNIEKVINFPFPTPPSVEALIAAEELLIALGALQAPQKTESVKQLQRSWLGC 760
Query: 997 -LTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESD 1053
+T LG M FP+ P AKML + Q GCL +TIV+ ++V +F DR SD
Sbjct: 761 PITALGRTMATFPVAPRYAKMLALSRQHGCLPYAITIVAAMTVRELF-EELDRPAASD 817
Score = 113 (44.8 bits), Expect = 4.5e-75, Sum P(3) = 4.5e-75
Identities = 23/51 (45%), Positives = 33/51 (64%)
Query: 1156 PCHLHPSSAIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMF 1206
P +HPSS ++ PE+VVY E++ TTK YM+ +AVE QW+ L P +
Sbjct: 957 PVFIHPSSVLFK--ELPEFVVYQEIMETTKMYMKGVSAVEVQWIPVLLPSY 1005
Score = 38 (18.4 bits), Expect = 2.7e-40, Sum P(2) = 2.7e-40
Identities = 6/23 (26%), Positives = 13/23 (56%)
Query: 1219 HKKKQKESKTAMEEEMENLRKIQ 1241
H +++ K E+ +E +RK +
Sbjct: 489 HTRRRPPEKEDQEDSVEEMRKFK 511
>MGI|MGI:2136388 [details] [associations]
symbol:Dqx1 "DEAQ RNA-dependent ATPase" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006200 "ATP catabolic
process" evidence=ISA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISA]
InterPro:IPR001650 InterPro:IPR007502 Pfam:PF04408 PROSITE:PS51194
SMART:SM00847 MGI:MGI:2136388 GO:GO:0005524 GO:GO:0005634
GO:GO:0003676 GO:GO:0016887 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 HOGENOM:HOG000175261 GeneTree:ENSGT00650000093246
HOVERGEN:HBG039428 CTD:165545 KO:K14433 OMA:CGQAVQA
OrthoDB:EOG4548Z3 EMBL:AF318278 EMBL:BC048936 EMBL:BC075680
IPI:IPI00125675 IPI:IPI00844713 RefSeq:NP_291084.1
UniGene:Mm.140332 ProteinModelPortal:Q924H9 SMR:Q924H9
PhosphoSite:Q924H9 PRIDE:Q924H9 Ensembl:ENSMUST00000077502
GeneID:93838 KEGG:mmu:93838 UCSC:uc009cmc.1 UCSC:uc009cmd.1
InParanoid:Q924H9 NextBio:351693 Bgee:Q924H9 CleanEx:MM_DQX1
Genevestigator:Q924H9 Uniprot:Q924H9
Length = 718
Score = 763 (273.6 bits), Expect = 5.1e-75, P = 5.1e-75
Identities = 199/648 (30%), Positives = 329/648 (50%)
Query: 578 LAEQRQYLPIFSVRDELLQVIRENQXXXX--XGETGSGKTTQLTQYLLE----DGYTTNG 631
L EQR+ LPI++ R L+ + + G+ GSGK+TQ+ Q+ E G+ T G
Sbjct: 35 LLEQRRALPIWAARFLFLEHLESSPTGVVLVSGDPGSGKSTQIPQWCAEFALARGFQT-G 93
Query: 632 IVGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETL 691
V TQP +AAMS+A RV++EMD LG ++GY+I ED TGP+T++++ D + L+E
Sbjct: 94 QVTVTQPYPLAAMSLASRVADEMDLTLGHEIGYSIPQEDCTGPNTMLRFCWDRLFLQEVA 153
Query: 692 KDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRR--DFKLIVTSATLNAQKFSDFF 749
+ V+++DEA ERS+++D+L G+L+ R D +++V + KF F+
Sbjct: 154 STRGPGAWSVLILDEAQERSVASDLLQGLLRDTRLRNLPGDPRVVVVTDPALEPKFQAFW 213
Query: 750 GSVPIFHIPGRTFPVNTL-YSKTPCEDYVEAAVKQAMTI-HITSPPGDILIFMTGQDEIE 807
G+ PI +P TL Y T D VEAA + + + PGD+L+++ ++EI
Sbjct: 214 GNSPIVRVPREPGGDPTLAYKDTVPTDLVEAACQAVLELCQQEEAPGDVLVYLPSEEEIS 273
Query: 808 AACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAE 867
C +L M L P +LP++ +Q ++E RK +V +A+
Sbjct: 274 LCCESLSGEMGTLAVPG----PPPRVLPLHPGCAQAIQT-VYEDTDVSVRKIVVTHWLAD 328
Query: 868 TSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLY 927
S ++ I +VID+G VYNP++ ++ + P+S C RLY
Sbjct: 329 FSFSLPSIQHVIDSGLELRSVYNPRIRAESQVLRPISKCQAEARLLRAKGFPPGSCLRLY 388
Query: 928 TESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWV 987
++S E P P P++ NL ++V F+D P E ++ ++ L
Sbjct: 389 SKSTLELEAPPLPHPKVCEENLSSLVLLLMRKQIAEPGECHFLDRPAPEALMRALEDLDY 448
Query: 988 LGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKD 1047
L ALN+ G L+DLG + EFPL P LAK LL + C+DE+LT+ +ML+ F RP
Sbjct: 449 LAALNDDGELSDLGVILSEFPLPPELAKALLASCEFNCVDEMLTLAAMLTAAPGFTRPPL 508
Query: 1048 RAEESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQLL 1107
A E+ A R + DH +L+ VY+ + + WC+ L+ +SL +AR++R++L+
Sbjct: 509 SAGEA-ALRRALEHADGDHSSLIQVYEAFVQSGADEAWCQARGLNWESLCQARKLRAELV 567
Query: 1108 DILKTLKIPLTSSGHDFDVVR----KAICSAYFHNAAR-LKGVGEYINCRNGMPCHLHPS 1162
++++ +++PL+ + R KA+ S YF AR G G Y+ + L P
Sbjct: 568 ELMQRIELPLSQPAFGSEQNRRDLQKALLSGYFLKVARDTDGTGNYLLLTHKHVAQLSPY 627
Query: 1163 SAIYGL---GYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFF 1207
+ P +V+YH ++ + + ++P+ L EL P +F
Sbjct: 628 CSYRNRRTPAQPPTWVLYHSFSISKDNCLCIVSEIQPEMLVELAPPYF 675
>UNIPROTKB|Q8IY37 [details] [associations]
symbol:DHX37 "Probable ATP-dependent RNA helicase DHX37"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000201240 KO:K14780 EMBL:BC002575 EMBL:BC037964
EMBL:AB040950 IPI:IPI00217630 RefSeq:NP_116045.2 UniGene:Hs.107382
ProteinModelPortal:Q8IY37 SMR:Q8IY37 IntAct:Q8IY37 STRING:Q8IY37
PhosphoSite:Q8IY37 DMDM:38257651 PaxDb:Q8IY37 PRIDE:Q8IY37
Ensembl:ENST00000308736 GeneID:57647 KEGG:hsa:57647 UCSC:uc001ugy.3
CTD:57647 GeneCards:GC12M125431 HGNC:HGNC:17210 HPA:HPA047607
neXtProt:NX_Q8IY37 PharmGKB:PA27224 HOVERGEN:HBG051356
InParanoid:Q8IY37 OMA:AKLQPRT OrthoDB:EOG4P2Q1J PhylomeDB:Q8IY37
GenomeRNAi:57647 NextBio:64382 ArrayExpress:Q8IY37 Bgee:Q8IY37
CleanEx:HS_DHX37 Genevestigator:Q8IY37 GermOnline:ENSG00000150990
Uniprot:Q8IY37
Length = 1157
Score = 476 (172.6 bits), Expect = 6.5e-75, Sum P(3) = 6.5e-75
Identities = 105/253 (41%), Positives = 159/253 (62%)
Query: 574 KSKTLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTT-NGI 632
+S + E+R LPI S +++ + E+ GETGSGKTTQ+ Q+L E G+++ + I
Sbjct: 241 RSPEMQEERLKLPILSEEQVIMEAVAEHPIVIVCGETGSGKTTQVPQFLYEAGFSSEDSI 300
Query: 633 VGCTQPRRVAAMSVAKRVSEEMDTELGDKV-GYAIRFEDVTGPSTLIKYMTDGVLLRETL 691
+G T+PRRVAA+++++RV++EM+ L +V Y IR+E T IK+MTDGVLL+E
Sbjct: 301 IGVTEPRRVAAVAMSQRVAKEMN--LSQRVVSYQIRYEGNVTEETRIKFMTDGVLLKEIQ 358
Query: 692 KDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVV---ARRR-DFKLIVTSATLNAQKFSD 747
KD L +Y+V+++DEAHERS+ TD+L G+L ++V A+R KL++ SATL + F+
Sbjct: 359 KDFLLLRYKVVIIDEAHERSVYTDILIGLLSRIVTLRAKRNLPLKLLIMSATLRVEDFTQ 418
Query: 748 ----FFGSVPIFHIPGRTFPVNTLYSK-TPCEDYVEAAVKQAMTIHITSPPGDILIFMTG 802
F P+ + R FPV ++K TP EDY ++ IH P G IL+F+TG
Sbjct: 419 NPRLFAKPPPVIKVESRQFPVTVHFNKRTPLEDYSGECFRKVCKIHRMLPAGGILVFLTG 478
Query: 803 QDEIEAACFALKE 815
Q E+ A C L++
Sbjct: 479 QAEVHALCRRLRK 491
Score = 309 (113.8 bits), Expect = 6.5e-75, Sum P(3) = 6.5e-75
Identities = 84/238 (35%), Positives = 116/238 (48%)
Query: 831 LLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYN 890
L +LP+YS L + QA++F+ EGTR C+VATN+AETSLT+ GI YV+D G K + Y+
Sbjct: 588 LHVLPLYSLLAPEKQAQVFKPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRYYD 647
Query: 891 PKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLG 950
G+ + +V VS CYRLY+ SA + P PEI R +
Sbjct: 648 RVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYS-SAVFGDFEQFPPPEITRRPVE 706
Query: 951 NVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGAL--------------NNVGA 996
+++ F F PP E +L + L LGAL N +
Sbjct: 707 DLILQMKALNVEKVINFPFPTPPSVEALLAAEELLIALGALQPPQKAERVKQLQENRLSC 766
Query: 997 -LTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESD 1053
+T LG M FP+ P AKML + Q GCL +TIV+ ++V +F DR SD
Sbjct: 767 PITALGRTMATFPVAPRYAKMLALSRQHGCLPYAITIVASMTVRELF-EELDRPAASD 823
Score = 113 (44.8 bits), Expect = 6.5e-75, Sum P(3) = 6.5e-75
Identities = 22/51 (43%), Positives = 33/51 (64%)
Query: 1156 PCHLHPSSAIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMF 1206
P +HPSS ++ PE+VVY E++ TTK YM+ ++VE QW+ L P +
Sbjct: 963 PVFIHPSSVLFK--ELPEFVVYQEIVETTKMYMKGVSSVEVQWIPALLPSY 1011
Score = 37 (18.1 bits), Expect = 1.2e-39, Sum P(2) = 1.2e-39
Identities = 9/28 (32%), Positives = 14/28 (50%)
Query: 1210 KDSDTSMLEHKKKQKESKTAMEEEMENL 1237
KDS M + KK + +K A E + +
Sbjct: 508 KDSVEEMRKFKKSRARAKKARAEVLPQI 535
>RGD|1591766 [details] [associations]
symbol:Dqx1 "DEAQ box RNA-dependent ATPase 1" species:10116
"Rattus norvegicus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 Pfam:PF04408 PROSITE:PS51194 SMART:SM00847
RGD:1591766 GO:GO:0005524 GO:GO:0003676 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CH473957
InterPro:IPR011709 Pfam:PF07717 GeneTree:ENSGT00650000093246
CTD:165545 KO:K14433 OMA:CGQAVQA OrthoDB:EOG4548Z3 IPI:IPI00194915
RefSeq:NP_001102877.1 UniGene:Rn.154059 Ensembl:ENSRNOT00000011002
GeneID:680434 KEGG:rno:680434 UCSC:RGD:1591766 NextBio:718702
Uniprot:D4A474
Length = 717
Score = 760 (272.6 bits), Expect = 1.1e-74, P = 1.1e-74
Identities = 205/677 (30%), Positives = 347/677 (51%)
Query: 578 LAEQRQYLPIFSVRDELLQVIRENQXXXX--XGETGSGKTTQLTQYLLE----DGYTTNG 631
L EQR+ LPI++ R L+ + + GE GSGK+TQ+ Q+ E G+ T G
Sbjct: 35 LLEQRRALPIWAARFLFLEHLESSPTGVVLVSGEPGSGKSTQIPQWCAEFALARGFQT-G 93
Query: 632 IVGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETL 691
V TQP +AAMS+A RV++EMD LG ++GY+I ED TGP+T++++ D + L+E
Sbjct: 94 QVTVTQPYPLAAMSLASRVADEMDLTLGHEIGYSIPQEDCTGPNTMLRFCWDRLFLQEVA 153
Query: 692 KDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRR--DFKLIVTSATLNAQKFSDFF 749
+ V+V+DEA ERS+++D+L G+L+ R D ++++ + + KF F+
Sbjct: 154 STRGPGAWSVLVLDEAQERSVASDLLQGLLRDTRLRNLPGDPRVVIVTDSALEPKFQAFW 213
Query: 750 GSVPIFHIPGRTFPVNTL-YSKTPCEDYVEAAVKQAMTI-HITSPPGDILIFMTGQDEIE 807
G+ P H+P TL Y T D VEAA + + + PGD+L+++ ++EI
Sbjct: 214 GNSPTVHVPREPGENPTLTYKDTVPADLVEAACQAVLELCQREEAPGDVLVYLPSEEEIS 273
Query: 808 AACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAE 867
C +L M L + +P +LP++ +Q ++E RK +V +A+
Sbjct: 274 LCCESLSREMGML--AVPGPLPR--VLPLHPGCGQAIQT-VYEDTDVSVRKIVVTHWLAD 328
Query: 868 TSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLY 927
S ++ I +VID+G VYNP++ ++ + +S C RLY
Sbjct: 329 FSFSLPFIQHVIDSGLELRSVYNPRIRAESQVLRRISKCQAEARLLRARGFPPGTCLRLY 388
Query: 928 TESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWV 987
++S E P P P++ NL ++V F+D P E ++ ++ L
Sbjct: 389 SKSTLDLEAPPLPHPKVCEENLSSLVLLLKRKQIAEPGECHFLDRPAPEALMQALEDLDY 448
Query: 988 LGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKD 1047
L AL++ G L+DLG + EFPL P LAK LL + C+DE+LT+ +ML+ F RP
Sbjct: 449 LAALDDDGDLSDLGIILSEFPLPPELAKALLASCEFNCVDEMLTLAAMLTAAPGFTRPPL 508
Query: 1048 RAEESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQLL 1107
A E+ A R + DH +L+ VY+ + + WC+ L ++L +AR++R++LL
Sbjct: 509 CAGEA-ALRRGLEHADGDHSSLIQVYEAFVQSGADETWCQARGLSWEALCQARKLRAELL 567
Query: 1108 DILKTLKIPLT----SSGHDFDVVRKAICSAYFHNAAR-LKGVGEYINCRNGMPCHLHPS 1162
++++ +++PL+ S + ++KA+ S YF AR G G Y+ + L P
Sbjct: 568 ELMQRIELPLSLPAFGSEQNRRDLQKALLSGYFLKVARDTDGTGNYLLLTHKHVAQLSPY 627
Query: 1163 SAIYGLGYTPE----YVVYHELILTTKEYMQCATAVEPQWLSELGPMFF--SVKDSDT-S 1215
+Y TP +V+YH ++ + + ++P+ L EL P +F ++ S++
Sbjct: 628 -CVYRNRRTPAQPPTWVLYHRFSISKDNCLCTVSEIQPEMLVELAPPYFLSNLPPSESRD 686
Query: 1216 MLEHKKKQKESKTAMEE 1232
+L ++ E A+ E
Sbjct: 687 LLNQLREGTEPSAAVTE 703
>RGD|1306837 [details] [associations]
symbol:Dhx37 "DEAH (Asp-Glu-Ala-His) box polypeptide 37"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
RGD:1306837 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074985 KO:K14780 CTD:57647
OMA:AKLQPRT OrthoDB:EOG4P2Q1J IPI:IPI00391385 RefSeq:NP_001099396.2
UniGene:Rn.24493 Ensembl:ENSRNOT00000030823 GeneID:288647
KEGG:rno:288647 UCSC:RGD:1306837 NextBio:628468 ArrayExpress:D4A1R0
Uniprot:D4A1R0
Length = 1150
Score = 477 (173.0 bits), Expect = 2.3e-73, Sum P(3) = 2.3e-73
Identities = 104/253 (41%), Positives = 158/253 (62%)
Query: 574 KSKTLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTT-NGI 632
++ + E+R LPI + +++ + E+ GETGSGKTTQ+ Q+L E GY++ + I
Sbjct: 237 RTPEMQEERLKLPILAEEQAIMEAVAEHPIVIVCGETGSGKTTQVPQFLYEAGYSSEDSI 296
Query: 633 VGCTQPRRVAAMSVAKRVSEEMDTELGDKV-GYAIRFEDVTGPSTLIKYMTDGVLLRETL 691
+G T+PRRVAA+++++RV++EM+ L +V Y IR+E T IK+MTDGVLL+E
Sbjct: 297 IGVTEPRRVAAVAMSQRVAKEMN--LSHRVVSYQIRYEGNVTEETRIKFMTDGVLLKEIQ 354
Query: 692 KDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVA----RRRDFKLIVTSATLNAQKFSD 747
KD L KY+V+++DEAHERS+ TD+L G+L ++VA R KL++ SATL + F+
Sbjct: 355 KDFLLLKYKVVIIDEAHERSVYTDILLGLLSRIVALRAKRHLPLKLLIMSATLRVEDFTQ 414
Query: 748 ----FFGSVPIFHIPGRTFPVNTLYSK-TPCEDYVEAAVKQAMTIHITSPPGDILIFMTG 802
F P+ + R FPV ++K TP +DY ++ IH P G IL+F+TG
Sbjct: 415 NQRLFTTPPPVIKVESRQFPVTVHFNKRTPLDDYSGECFRKVCKIHRMLPAGGILVFLTG 474
Query: 803 QDEIEAACFALKE 815
Q E+ A C L++
Sbjct: 475 QAEVHALCRRLRK 487
Score = 294 (108.6 bits), Expect = 2.3e-73, Sum P(3) = 2.3e-73
Identities = 83/245 (33%), Positives = 118/245 (48%)
Query: 831 LLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYN 890
L +LP+YS L + QA++F+ EGTR C++ATN+AETSLT+ GI YV+D G K + Y+
Sbjct: 581 LHVLPLYSLLAPEKQAQVFKPPPEGTRLCVIATNVAETSLTIPGIKYVVDCGKVKKRYYD 640
Query: 891 PKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLG 950
G+ + +V VS CYRLY+ SA + P PEI R +
Sbjct: 641 RVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYS-SAVFGDFEQFPPPEITRRPVE 699
Query: 951 NVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALN-----------NVGAL-- 997
+++ F F PP E ++ + L LGAL + L
Sbjct: 700 DLILQMKALNIEKVINFPFPTPPSVEALIAAEELLIALGALQAPPKQERMKKLQMSQLSC 759
Query: 998 --TDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDR--AEESD 1053
T LG M FP+ P AKML + +Q GCL + IV+ ++V +F DR A E +
Sbjct: 760 PITALGRTMSTFPVAPRYAKMLALSQQHGCLPYTIAIVAAMTVRELF-EELDRPAASEEE 818
Query: 1054 AAREK 1058
A K
Sbjct: 819 LAELK 823
Score = 112 (44.5 bits), Expect = 2.3e-73, Sum P(3) = 2.3e-73
Identities = 22/51 (43%), Positives = 32/51 (62%)
Query: 1156 PCHLHPSSAIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMF 1206
P +HPSS ++ PE+VVY E++ TTK YM+ + VE QW+ L P +
Sbjct: 956 PVFIHPSSVLFR--ELPEFVVYQEIVETTKMYMKGVSTVEIQWIPSLLPSY 1004
Score = 57 (25.1 bits), Expect = 1.5e-28, Sum P(3) = 1.5e-28
Identities = 23/65 (35%), Positives = 32/65 (49%)
Query: 391 QKKEVELAK--RLVRKDGSRMSLAQSKKLSQITADNHQWEERQLLRSGAVRGTE-LSTEF 447
Q+ E + A+ R +K +R AQ+ L QI DN+ +L +G G E E
Sbjct: 497 QEMEEDSAEGMRRFKKSRTRARKAQAMALPQINLDNYS-----VLPAG--EGDEDREAEM 549
Query: 448 DDEEE 452
DDEEE
Sbjct: 550 DDEEE 554
>UNIPROTKB|Q8TE96 [details] [associations]
symbol:DQX1 "ATP-dependent RNA helicase DQX1" species:9606
"Homo sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 Pfam:PF04408 PROSITE:PS51194
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 HOGENOM:HOG000175261
EMBL:AC005041 HOVERGEN:HBG039428 CTD:165545 KO:K14433 OMA:CGQAVQA
OrthoDB:EOG4548Z3 EMBL:AK074337 EMBL:AK092420 EMBL:BC075018
IPI:IPI00385794 IPI:IPI00843897 IPI:IPI00844595 RefSeq:NP_598376.2
UniGene:Hs.191705 ProteinModelPortal:Q8TE96 SMR:Q8TE96
STRING:Q8TE96 PhosphoSite:Q8TE96 DMDM:145558898 PaxDb:Q8TE96
PRIDE:Q8TE96 Ensembl:ENST00000393951 Ensembl:ENST00000404568
GeneID:165545 KEGG:hsa:165545 UCSC:uc010yrw.2 GeneCards:GC02M074745
H-InvDB:HIX0200286 HGNC:HGNC:20410 HPA:HPA039158 neXtProt:NX_Q8TE96
PharmGKB:PA134916600 InParanoid:Q8TE96 GenomeRNAi:165545
NextBio:88548 ArrayExpress:Q8TE96 Bgee:Q8TE96 CleanEx:HS_DQX1
Genevestigator:Q8TE96 Uniprot:Q8TE96
Length = 717
Score = 747 (268.0 bits), Expect = 2.8e-73, P = 2.8e-73
Identities = 202/647 (31%), Positives = 326/647 (50%)
Query: 578 LAEQRQYLPIFSVRDELLQVIRENQXXXX--XGETGSGKTTQLTQYLLEDGYTTN---GI 632
L +QRQ LPI++ R L+ + N GE GSGK+TQ+ Q+ E G
Sbjct: 38 LLKQRQALPIWAARFTFLEQLESNPTGVVLVSGEPGSGKSTQIPQWCAEFALARGFQKGQ 97
Query: 633 VGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLK 692
V TQP +AA S+A RV++EMD LG +VGY+I ED TGP+TL+++ D +LL+E
Sbjct: 98 VTVTQPYPLAARSLALRVADEMDLTLGHEVGYSIPQEDCTGPNTLLRFCWDRLLLQEVAS 157
Query: 693 DSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRR--DFKLIVTSATLNAQKFSDFFG 750
+ V+V+DEA ERS+++D L G+L+ + D +++V + K F+G
Sbjct: 158 TRGTGAWGVLVLDEAQERSVASDSLQGLLQDARLEKLPGDLRVVVVTDPALEPKLRAFWG 217
Query: 751 SVPIFHIPGRTFP-VNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAA 809
+ PI HIP + +Y T D VEAA + + + PGD+L+F+ ++EI
Sbjct: 218 NPPIVHIPREPGERPSPIYWDTIPPDRVEAACQAVLELCRKELPGDVLVFLPSEEEISLC 277
Query: 810 CFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETS 869
C +L +E L+ + +P +LP++ +QA ++E RK +V +A+ S
Sbjct: 278 CESLSREVESLL---LQGLPPR-VLPLHPDCGRAVQA-VYEDMD--ARKVVVTHWLADFS 330
Query: 870 LTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTE 929
++ I +VID+G VYNP++ + + P+S C LY +
Sbjct: 331 FSLPSIQHVIDSGLELRSVYNPRIRAEFQVLRPISKCQAEARRLRARGFPPGSCLCLYPK 390
Query: 930 SAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLG 989
S E P P P + NL ++V F+D P E ++ ++ L L
Sbjct: 391 SFLELEAPPLPQPRVCEENLSSLVLLLKRRQIAEPGECHFLDQPAPEALMQALEDLDYLA 450
Query: 990 ALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRA 1049
AL++ G L+DLG + EFPL P LAK LL + C+DE+LT+ +ML+ F RP A
Sbjct: 451 ALDDDGDLSDLGVILSEFPLAPELAKALLASCEFDCVDEMLTLAAMLTAAPGFTRPPLSA 510
Query: 1050 EESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQLLDI 1109
EE+ A R + DH +L+ VY+ + + WC+ L+ +L +A ++R +LL++
Sbjct: 511 EEA-ALRRALEHTDGDHSSLIQVYEAFIQSGADEAWCQARGLNWAALCQAHKLRGELLEL 569
Query: 1110 LKTLKIPLT----SSGHDFDVVRKAICSAYFHNAAR-LKGVGEYINCRNGMPCHLHPSSA 1164
++ +++PL+ S + ++KA+ S YF AR G G Y+ + L S
Sbjct: 570 MQRIELPLSLPAFGSEQNRRDLQKALVSGYFLKVARDTDGTGNYLLLTHKHVAQLS-SYC 628
Query: 1165 IY----GLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFF 1207
Y P +V+YH ++ + + ++PQ L EL P +F
Sbjct: 629 CYRSRRAPARPPPWVLYHNFTISKDNCLSIVSEIQPQMLVELAPPYF 675
>ZFIN|ZDB-GENE-030131-4505 [details] [associations]
symbol:dhx37 "DEAH (Asp-Glu-Ala-His) box
polypeptide 37" species:7955 "Danio rerio" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-030131-4505 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00550000074985 KO:K14780
CTD:57647 HOVERGEN:HBG051356 OMA:AKLQPRT EMBL:CABZ01014508
EMBL:CABZ01038687 EMBL:CABZ01038688 EMBL:CABZ01038689
EMBL:CABZ01038690 EMBL:CABZ01038691 EMBL:CABZ01038692
EMBL:CABZ01038693 EMBL:CABZ01038694 EMBL:CABZ01038695
EMBL:CABZ01038696 EMBL:CU469504 EMBL:FP085395 IPI:IPI00488738
RefSeq:NP_001076473.2 UniGene:Dr.79711 Ensembl:ENSDART00000090731
Ensembl:ENSDART00000127153 GeneID:100009635 KEGG:dre:100009635
NextBio:20787816 Uniprot:B8JLP0
Length = 1152
Score = 481 (174.4 bits), Expect = 3.2e-73, Sum P(4) = 3.2e-73
Identities = 114/297 (38%), Positives = 170/297 (57%)
Query: 532 KKTAEQVDADTAVVGEQGEIDFREDAKFSQHMKKGEAVSDFAKSKTLAE---QRQYLPIF 588
K T EQ + E D +E+ K K+ + F + L E R LP+
Sbjct: 196 KHTEEQQQQVLKEETKPKEADMKEEKKAETWTKEDCKPAVFIPVERLPEIQEARLRLPVL 255
Query: 589 SVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNG-IVGCTQPRRVAAMSVA 647
+ +++ +++++ GETGSGKTTQ+ Q+L E G+ ++G I+G T+PRRVAA+S++
Sbjct: 256 AEEQIIMEAVKDHECVVLCGETGSGKTTQVPQFLYEAGFASSGGIIGVTEPRRVAAISMS 315
Query: 648 KRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDSDLDKYRVIVMDEA 707
RV+ EM+ G V Y IR+E +T IK MTDGVLL+E +D L KY VI++DEA
Sbjct: 316 HRVATEMNLSSG-VVSYQIRYEGNVTENTKIKVMTDGVLLKEIQRDFLLQKYSVIIIDEA 374
Query: 708 HERSLSTDVLFGILKKVVARRRD----FKLIVTSATLNAQKFSD---FFGSVP-IFHIPG 759
HERS+ TD+L G+L ++V R KLI+ SATL + F++ F S P + +
Sbjct: 375 HERSVYTDILIGLLSRIVPLRNKKGLPMKLIIMSATLRVEDFTENKRLFSSPPPVIKVEA 434
Query: 760 RTFPVNTLYSK-TPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKE 815
R F V ++K TP +DY ++ IH PPG IL+F+TGQ E+ + C L++
Sbjct: 435 RQFAVTVHFNKRTPMDDYTGETFRKICKIHRMLPPGGILVFLTGQAEVHSVCRRLRK 491
Score = 295 (108.9 bits), Expect = 3.2e-73, Sum P(4) = 3.2e-73
Identities = 82/246 (33%), Positives = 119/246 (48%)
Query: 828 VPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMK 887
+P L +LP+YS L + QAK+F G+R C+VATN+AETSLT+ GI YV+D G K +
Sbjct: 578 IP-LYVLPLYSLLAPEQQAKVFRPPPAGSRLCVVATNVAETSLTIPGIKYVVDCGRVKKR 636
Query: 888 VYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRT 947
Y+ G+ + +V +S CYRLY+ + + + L S EI R
Sbjct: 637 FYDRVTGVSSFKVTWISQASANQRAGRAGRTEPGHCYRLYSSAVFGDFSLFSEA-EITRR 695
Query: 948 NLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNV---GALTD----- 999
+ ++V F F PP E ++ + L LGAL G L++
Sbjct: 696 PVEDLVLQMKDLNIEKVVNFPFPTPPSSEALIAAEELLISLGALEKPARHGRLSEMEKAR 755
Query: 1000 -------LGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEES 1052
LG M FP+ P AKML +G Q GC+ ++TIVS ++V +F DR S
Sbjct: 756 LSCPISPLGRAMAAFPVAPRYAKMLALGRQQGCMQYIITIVSAMTVREIF-EDYDRPAGS 814
Query: 1053 DAAREK 1058
+ K
Sbjct: 815 EEENVK 820
Score = 112 (44.5 bits), Expect = 3.2e-73, Sum P(4) = 3.2e-73
Identities = 22/51 (43%), Positives = 33/51 (64%)
Query: 1156 PCHLHPSSAIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMF 1206
P +HPSSA++ PE+VVY E++ TTK YM+ AV+ W+ +L P +
Sbjct: 955 PVFIHPSSALHKT--LPEFVVYQEIMETTKMYMRGVCAVQDDWIPKLLPQY 1003
Score = 39 (18.8 bits), Expect = 3.2e-73, Sum P(4) = 3.2e-73
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 80 DEEEKSESSGIDEVVSNATNGKRSHASRRYRE 111
DEEE+ S + E + + + S +S +E
Sbjct: 159 DEEEEENESEMSESSEDDDDSEESDSSEEEKE 190
Score = 39 (18.8 bits), Expect = 1.6e-39, Sum P(3) = 1.6e-39
Identities = 10/30 (33%), Positives = 19/30 (63%)
Query: 1214 TSMLEHKKKQKESKTAMEEEMENLRKIQAD 1243
T M+E ++ K+SK A ++ + +L +I D
Sbjct: 502 TDMMETEEDLKKSKRAKKKNV-SLPRINLD 530
Score = 39 (18.8 bits), Expect = 8.6e-27, Sum P(3) = 8.6e-27
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 76 AASIDEEEKSESSGIDE 92
A +DE ++ +GIDE
Sbjct: 534 ALPVDEGDEDRQAGIDE 550
Score = 38 (18.4 bits), Expect = 1.1e-26, Sum P(3) = 1.1e-26
Identities = 12/57 (21%), Positives = 27/57 (47%)
Query: 327 ESSQSFEDGVADETYSEEHNYEITESMRLEMEYNSDRAWYDREEGTTMFDTDSSSFI 383
+SS+ ++ +++E ++EE ++ + E +D + E T D + FI
Sbjct: 183 DSSEEEKEKISEEKHTEEQQQQVLKEETKPKE--ADMKEEKKAETWTKEDCKPAVFI 237
>UNIPROTKB|Q3ZBE0 [details] [associations]
symbol:DQX1 "ATP-dependent RNA helicase DQX1" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR007502 Pfam:PF04408 PROSITE:PS51194
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0004386
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
HOGENOM:HOG000175261 GeneTree:ENSGT00650000093246
HOVERGEN:HBG039428 EMBL:BC103411 IPI:IPI00704154
RefSeq:NP_001030399.1 UniGene:Bt.49583 PRIDE:Q3ZBE0
Ensembl:ENSBTAT00000033191 GeneID:517947 KEGG:bta:517947 CTD:165545
InParanoid:Q3ZBE0 KO:K14433 OMA:CGQAVQA OrthoDB:EOG4548Z3
NextBio:20872543 Uniprot:Q3ZBE0
Length = 719
Score = 744 (267.0 bits), Expect = 6.0e-73, P = 6.0e-73
Identities = 197/684 (28%), Positives = 352/684 (51%)
Query: 578 LAEQRQYLPIFSVRDELLQVIRENQXXXX--XGETGSGKTTQLTQ----YLLEDGYTTNG 631
L EQR+ LP+++ R L+ + + GE G GK+TQ+ Q ++L G+ G
Sbjct: 38 LLEQRRSLPVWAARFIFLEHLESSPSGVVLVSGEPGCGKSTQIPQWCAEFVLARGFQ-KG 96
Query: 632 IVGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETL 691
V TQP +AA+S+A RV++EMD LG +VGY+I ED TGP TL+++ D +LL+E
Sbjct: 97 WVTVTQPYPLAALSLALRVADEMDLTLGHEVGYSIPQEDCTGPDTLLRFCWDRLLLQEVA 156
Query: 692 KDSDLDKYRVIVMDEAHERSLSTDVLFGILK--KVVARRRDFKLIVTSATLNAQKFSDFF 749
V+++DEA ERS+++D+L G+L+ ++ + D +++V + K DF+
Sbjct: 157 STRGTGARGVLILDEAQERSVASDLLQGLLRDARLGSLPGDLRVVVVTDPSLEPKLQDFW 216
Query: 750 GSVPIFHIPGRTFPVNT-LYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEA 808
G P +P +T T +Y + D V+AA + + PGD+L+++ ++EI
Sbjct: 217 GGPPTVCVPRKTGSCPTPVYRDSLPADRVDAACQAVLEWCQEEAPGDVLVYLPSEEEISL 276
Query: 809 ACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAET 868
C E + + + S + P +LP++ +QA ++E + G RK +V +A+
Sbjct: 277 CC----ESLSRKVRSLENQGPPPRVLPLHPGCGQAVQA-VYEDTESGARKVVVTHWLADF 331
Query: 869 SLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYT 928
S ++ I +VID+G VY+P++ ++ + PVS C LY
Sbjct: 332 SFSLPSIRHVIDSGLELRSVYSPQIRAESQVLRPVSKCQAEARRLRAAGIPPGSCLCLYP 391
Query: 929 ESAYLNEMLPS-PVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWV 987
+S +L P P P + NL +++ F+D P E ++ ++ L
Sbjct: 392 KS-FLELEAPYLPQPRVWAENLSSLMLLLKRRQIAEPGKCHFLDRPAPEALMQALEDLDY 450
Query: 988 LGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKD 1047
L AL++ G L+DLG + EFPL P LAK LL + C+DE+LT+ +ML+ F RP
Sbjct: 451 LAALDDDGDLSDLGVILSEFPLAPELAKALLASCEFDCVDEMLTLAAMLTAAPGFTRPPV 510
Query: 1048 RAEESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQLL 1107
AEE+ A R + DH +L+ VY+ + + WC+ L+ +L +AR++R +LL
Sbjct: 511 CAEEA-ALRRALEHVDGDHSSLIQVYEAFIQSGADKAWCQARGLNWAALCQARKLRGELL 569
Query: 1108 DILKTLKIPLTS----SGHDFDVVRKAICSAYFHNAAR-LKGVGEYINCRNGMPCHLHPS 1162
++++ +++PL+ S + ++KA+ S YF AR G G Y+ + L P+
Sbjct: 570 ELMQRIELPLSQPAFGSERNRRDLQKALVSGYFLKVARDTDGTGNYLLLTHKHVAQLSPN 629
Query: 1163 SAIYGL---GYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFF--SVKDSDTSML 1217
P +V+YH ++ + + ++PQ L EL P +F ++ S++
Sbjct: 630 CCYRSRRAPARPPLWVLYHSFSISKDNCLSIVSEIQPQMLVELAPPYFLSNLPPSESRDF 689
Query: 1218 EHKKKQKESKTAMEEEMENLRKIQ 1241
++ +++ + +++ E + ++++
Sbjct: 690 LNQLREERTDSSIRSESSSTQELE 713
>UNIPROTKB|E2QXW1 [details] [associations]
symbol:DQX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR007502 Pfam:PF04408 SMART:SM00847 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00650000093246 CTD:165545 KO:K14433 OMA:CGQAVQA
EMBL:AAEX03010965 RefSeq:XP_532994.2 Ensembl:ENSCAFT00000013395
GeneID:475784 KEGG:cfa:475784 NextBio:20851558 Uniprot:E2QXW1
Length = 719
Score = 744 (267.0 bits), Expect = 6.0e-73, P = 6.0e-73
Identities = 204/675 (30%), Positives = 340/675 (50%)
Query: 578 LAEQRQYLPIFSVRDELLQVIRENQXXXX--XGETGSGKTTQLTQYLLEDGYTTN---GI 632
L EQR+ LPI++ R L+ + + GE GSGK+TQ+ Q+ E G
Sbjct: 38 LLEQRRALPIWATRFIFLEQLESSPSGVVLVSGEPGSGKSTQIPQWCAEFALARGFKEGR 97
Query: 633 VGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLK 692
V TQP +AA+S+A RV++EMD LG +VGY+I ED TGP TL+++ D +LL+E
Sbjct: 98 VTVTQPYPLAALSLAVRVADEMDLTLGQEVGYSIPQEDCTGPDTLLRFCWDRLLLQEVAS 157
Query: 693 DSDLDKYRVIVMDEAHERSLSTDVLFGILK--KVVARRRDFKLIVTSATLNAQKFSDFFG 750
+ V+V+DEA ERS+++D+L G+L+ K+ D +++V + K F+G
Sbjct: 158 TRGTGAWGVLVLDEAQERSVASDLLQGLLRNAKLGNLPGDSRVVVVTDPALEPKLQAFWG 217
Query: 751 SVPIFHIP-GRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAA 809
+ I H+P G +Y D VEAA + + + PGD+L+++ ++EI
Sbjct: 218 NPTIVHVPRGPGACPTPVYRDIVPTDRVEAACQAVLELCAKEAPGDVLVYLPSEEEILQC 277
Query: 810 CFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETS 869
C +L +E L R P +LP++ +QA +E G RK +V +A+ S
Sbjct: 278 CESLSREVEPL---ALRGPPPR-VLPLHPGHGPAVQAA-YEDIDLGARKVVVTHWLADFS 332
Query: 870 LTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTE 929
++ I +VID+G VYNP++ ++ + P+S C LY E
Sbjct: 333 FSLPSIRHVIDSGLELRSVYNPQIRAESQVLRPISRCQAEARRLRARGIPPGSCICLYPE 392
Query: 930 SAYLNEMLPS-PVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVL 988
S +L P P P + NL +V F+D P E ++ ++ L L
Sbjct: 393 S-FLELEAPLLPPPRVCEENLSPMVLLLKRRQIAEPGECHFLDRPAPEALMQALEDLDYL 451
Query: 989 GALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDR 1048
AL++ G L+DLG + EFPL P LAK LL + C+DE+LT+ +ML+ F P
Sbjct: 452 AALDDDGNLSDLGVILSEFPLPPELAKALLASCEFDCVDEMLTLAAMLTAAPGFTHPPLS 511
Query: 1049 AEESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQLLD 1108
AEE+ A R + DH +L+ VY+ + + WC+ L+ +L +A+++R +LL+
Sbjct: 512 AEEA-ALRRALEHADGDHSSLIQVYEAFIQSGADEAWCQARGLNWAALCQAQKLRGELLE 570
Query: 1109 ILKTLKIPLTSSGHDFDVVR----KAICSAYFHNAAR-LKGVGEYINCRNGMPCHLHPSS 1163
+++ +++PL+ + R KA+ S YF AR G G Y+ + L P
Sbjct: 571 LMQQIELPLSQPAFGSEQNRRDLQKALVSGYFLKVARDTDGTGNYLLLTHKHVAQLSPYC 630
Query: 1164 AIYGL---GYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFF--SVKDSDTSMLE 1218
+P +V+YH ++ + + ++PQ L EL P +F ++ S++ L
Sbjct: 631 CYRSRRSPARSPPWVLYHSFSISKDNCLSIVSEIQPQMLVELAPPYFLSNLPPSESRDLL 690
Query: 1219 HKKKQKESKTAMEEE 1233
++ +++ + +++E E
Sbjct: 691 NELREETTDSSIESE 705
>SGD|S000004735 [details] [associations]
symbol:ECM16 "Essential DEAH-box ATP-dependent RNA helicase
specific to U3 snoRNP" species:4932 "Saccharomyces cerevisiae"
[GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0000462 "maturation
of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] [GO:0042254 "ribosome biogenesis"
evidence=IEA;IDA;TAS] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0030686 "90S
preribosome" evidence=IDA] [GO:0003724 "RNA helicase activity"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000004735 GO:GO:0005739 GO:GO:0005524
GO:GO:0005730 GO:GO:0003723 EMBL:BK006946 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0030686 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0032040 GO:GO:0008026
GO:GO:0003724 GO:GO:0000462 EMBL:Z48622 PIR:S53058
RefSeq:NP_013847.1 ProteinModelPortal:Q04217 SMR:Q04217
DIP:DIP-6722N IntAct:Q04217 MINT:MINT-614026 STRING:Q04217
PaxDb:Q04217 PeptideAtlas:Q04217 PRIDE:Q04217 EnsemblFungi:YMR128W
GeneID:855158 KEGG:sce:YMR128W CYGD:YMR128w
GeneTree:ENSGT00550000074985 HOGENOM:HOG000201240 KO:K14780
OMA:HQLKREE OrthoDB:EOG4KM2B8 NextBio:978575 Genevestigator:Q04217
GermOnline:YMR128W Uniprot:Q04217
Length = 1267
Score = 465 (168.7 bits), Expect = 3.7e-72, Sum P(5) = 3.7e-72
Identities = 104/257 (40%), Positives = 151/257 (58%)
Query: 571 DFAKSKTLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTN 630
+ ++S + + R LP+F ++++ I N GETGSGKTTQ+ Q+L E G+
Sbjct: 377 EVSRSDEIQKARIQLPVFGEEHKIMEAIHHNDVVIICGETGSGKTTQVPQFLYEAGFGAE 436
Query: 631 ------GIVGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDG 684
G+VG TQPRRVAA+S+A+RV+ E+ G KVGY IRF+ T +K+MTDG
Sbjct: 437 DSPDYPGMVGITQPRRVAAVSMAERVANELGDH-GHKVGYQIRFDSTAKEDTKVKFMTDG 495
Query: 685 VLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARR-----------RDFKL 733
VLLRE + D L KY I++DEAHER+++TD+L G+L + V R + KL
Sbjct: 496 VLLREMMHDFKLTKYSSIIIDEAHERNINTDILIGMLSRCVRLRAKLHKENPIEHKKLKL 555
Query: 734 IVTSATLNAQKFSD----FFGSVPIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHI 789
I+ SATL FS+ F + P+ + R FPV+ +++ +Y + A ++ IH
Sbjct: 556 IIMSATLRVSDFSENKTLFPIAPPVLQVDARQFPVSIHFNRRTAFNYTDEAFRKTCKIHQ 615
Query: 790 TSPPGDILIFMTGQDEI 806
PPG IL+F+TGQ EI
Sbjct: 616 KLPPGAILVFLTGQQEI 632
Score = 357 (130.7 bits), Expect = 3.7e-72, Sum P(5) = 3.7e-72
Identities = 82/241 (34%), Positives = 126/241 (52%)
Query: 802 GQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIV 861
G+DE + +E E++++ L +LP+YS LP Q ++F+K +G+R CIV
Sbjct: 704 GEDEEDEE----EEGFEEVLTEGQTANDPLYVLPLYSLLPTKEQMRVFQKPPQGSRLCIV 759
Query: 862 ATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXX 921
ATN+AETSLT+ G+ YV+D+G K + YN G+ + +V VS
Sbjct: 760 ATNVAETSLTIPGVRYVVDSGRSKERKYNESNGVQSFEVGWVSKASANQRSGRAGRTGPG 819
Query: 922 XCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNS 981
CYRLY+ + + ++ PEI R + ++V F F PP + + +
Sbjct: 820 HCYRLYSSAVFEHDFEQFSKPEILRMPVESIVLQMKSMAIHNIINFPFPTPPDRVALSKA 879
Query: 982 MYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSV 1041
+ L LGAL+N +T+ G KM FPL P +KMLL+ ++ CL ++ IVS LSV
Sbjct: 880 IQLLQYLGALDNKEMITEDGKKMSLFPLSPRFSKMLLVSDEKACLPYIVAIVSALSVGDP 939
Query: 1042 F 1042
F
Sbjct: 940 F 940
Score = 53 (23.7 bits), Expect = 3.7e-72, Sum P(5) = 3.7e-72
Identities = 10/26 (38%), Positives = 18/26 (69%)
Query: 1158 HLHPSSAIYGLG-YTPEYVVYHELIL 1182
++HP+S + LG P+Y++Y+ L L
Sbjct: 1134 YIHPTSILNNLGEMPPKYMLYYSLHL 1159
Score = 50 (22.7 bits), Expect = 3.7e-72, Sum P(5) = 3.7e-72
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 57 KGGGSQIDDG---FKVPRVASVAASIDEEEKSESSGID 91
+GG S+ DDG F+ S+ D EEK S ID
Sbjct: 178 EGGSSEDDDGEDDFEAS-FGSMPKPTDNEEKKSSGFID 214
Score = 44 (20.5 bits), Expect = 6.6e-72, Sum P(4) = 6.6e-72
Identities = 26/106 (24%), Positives = 40/106 (37%)
Query: 358 EYNSDRAWYDREEGTTMFDTDSSSFILGDDASYQKKEVELAKRLVRKDGSRMSLAQSK-- 415
EY + D ++G F+ S D +K + R + GS +S S
Sbjct: 175 EYGEGGSSED-DDGEDDFEASFGSMPKPTDNEEKKSSGFIDHRPAKFGGSGLSFGFSNIK 233
Query: 416 ---KLSQITADNHQWEER----QLLRSGAVRGTELST--EFDDEEE 452
K S+ + W +R +L + G + T E DDEEE
Sbjct: 234 VINKESKTPKKKYNWRQRVEMEELKKHGKEDEMDFDTTSEDDDEEE 279
Score = 40 (19.1 bits), Expect = 3.7e-72, Sum P(5) = 3.7e-72
Identities = 16/71 (22%), Positives = 29/71 (40%)
Query: 326 RESSQSFEDGVADETYSEEHNYEITESMRLEMEYNSDRAWYDREEGTTMFDTDSSSFILG 385
+E F+ D+ EE + E + M + D E G+ FD + +
Sbjct: 262 KEDEMDFDTTSEDD--DEEEDQEEEDKMHPSENPLEEVESADSETGSEKFDQNDVANEFK 319
Query: 386 DDASYQKKEVE 396
D A+ + K++E
Sbjct: 320 DWANQEIKKLE 330
Score = 37 (18.1 bits), Expect = 3.1e-27, Sum P(5) = 3.1e-27
Identities = 7/10 (70%), Positives = 10/10 (100%)
Query: 569 VSDFAKSKTL 578
VSDF+++KTL
Sbjct: 564 VSDFSENKTL 573
Score = 37 (18.1 bits), Expect = 5.5e-27, Sum P(3) = 5.5e-27
Identities = 6/16 (37%), Positives = 11/16 (68%)
Query: 80 DEEEKSESSGIDEVVS 95
++EE E G +EV++
Sbjct: 705 EDEEDEEEEGFEEVLT 720
>UNIPROTKB|Q6P158 [details] [associations]
symbol:DHX57 "Putative ATP-dependent RNA helicase DHX57"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR009060 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00642 Pfam:PF04408 Pfam:PF05773
PROSITE:PS00690 PROSITE:PS50103 PROSITE:PS51194 SMART:SM00356
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
EMBL:AC018693 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AK057423 EMBL:BC053623 EMBL:BC060778
EMBL:BC065278 EMBL:BC131534 EMBL:AF283512 IPI:IPI00168885
IPI:IPI00399364 IPI:IPI00749029 RefSeq:NP_945314.1
UniGene:Hs.468226 ProteinModelPortal:Q6P158 SMR:Q6P158
IntAct:Q6P158 STRING:Q6P158 PhosphoSite:Q6P158 DMDM:94710252
PaxDb:Q6P158 PeptideAtlas:Q6P158 PRIDE:Q6P158
Ensembl:ENST00000295373 GeneID:90957 KEGG:hsa:90957 UCSC:uc002rre.3
UCSC:uc002rrg.3 CTD:90957 GeneCards:GC02M039025 HGNC:HGNC:20086
HPA:HPA036160 neXtProt:NX_Q6P158 PharmGKB:PA134919698
HOVERGEN:HBG080658 InParanoid:Q6P158 KO:K13026 OMA:RAYKGWQ
OrthoDB:EOG4ZS929 PhylomeDB:Q6P158 ChiTaRS:DHX57 GenomeRNAi:90957
NextBio:77048 ArrayExpress:Q6P158 Bgee:Q6P158 CleanEx:HS_DHX57
Genevestigator:Q6P158 GermOnline:ENSG00000163214 Uniprot:Q6P158
Length = 1386
Score = 411 (149.7 bits), Expect = 5.6e-72, Sum P(4) = 5.6e-72
Identities = 105/327 (32%), Positives = 173/327 (52%)
Query: 450 EEEHKVILLVHDTKPPFLDGRIVFTKQAEPVMPIKDPTSDMAIISRKGSALVREIREKQT 509
EEE +++ L+ +T + D + F I +P +I S + +I E +
Sbjct: 416 EEESEIVKLLTNTHHKYSDPPVNFLPVPSRTR-INNPACHKTVIPNN-SFVSNQIPEVEK 473
Query: 510 QNKSRQRFWELAGSQMGNILGVKKTAEQVDADTAVVGE---QGEIDFREDAKFSQHMKKG 566
++S + + G + + V+ + Q + E+ K + +
Sbjct: 474 ASESEE-----SDEDDGPAPVIVENESYVNLKKKISKRYDWQAKSVHAENGKICKQFRMK 528
Query: 567 EAVSDFAKSKTLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDG 626
+A F +++ ++RQ LP + R+ +L ++R++Q G TG GKTTQ+ Q++L+D
Sbjct: 529 QASRQF---QSILQERQSLPAWEERETILNLLRKHQVVVISGMTGCGKTTQIPQFILDDS 585
Query: 627 YT-----TNGIVGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYM 681
I+ CTQPRR++A+SVA+RV++E +G VGY IR E V +T + Y
Sbjct: 586 LNGPPEKVANII-CTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYC 644
Query: 682 TDGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLN 741
T GVLLR D+ L I++DE HER+ +D L +LK +V++R ++I+ SATLN
Sbjct: 645 TTGVLLRRLEGDTALQGVSHIIVDEVHERTEESDFLLLVLKDIVSQRPGLQVILMSATLN 704
Query: 742 AQKFSDFFGSVPIFHIPGRTFPVNTLY 768
A+ FSD+F S P+ IPGRTFPV+ +
Sbjct: 705 AELFSDYFNSCPVITIPGRTFPVDQFF 731
Score = 404 (147.3 bits), Expect = 5.6e-72, Sum P(4) = 5.6e-72
Identities = 101/349 (28%), Positives = 172/349 (49%)
Query: 775 DYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLIL 834
+ +EA ++ + + PPG IL+F+ G EI+ L E+++ R +I
Sbjct: 829 ELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKM----LYEQLQSNSLFNNRRSNRCVIH 884
Query: 835 PIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMG 894
P++S L ++ Q +F K G K I++TNIAETS+T+D + YVID+G K K Y+ G
Sbjct: 885 PLHSSLSSEEQQAVFVKPPAGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKG 944
Query: 895 MDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNV-- 952
M++L+ VS C+ L+T Y +++L +PEIQR L +
Sbjct: 945 MESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCL 1004
Query: 953 ---VXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPL 1009
+ ++PP +++ S +L LGAL LT LG+ + P+
Sbjct: 1005 RIKILEMFSAHNLQSVFSRLIEPPHTDSLRASKIRLRDLGALTPDERLTPLGYHLASLPV 1064
Query: 1010 DPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAAREKFFVQESDHLTL 1069
D + K++L G CLD LTI + L+ S F P D+ EE++ + +F SD+L L
Sbjct: 1065 DVRIGKLMLFGSIFRCLDPALTIAASLAFKSPFVSPWDKKEEANQKKLEFAFANSDYLAL 1124
Query: 1070 LYVYQQWKEHQYRG-----DWCEEHYLHVKSLRKAREVRSQLLDILKTL 1113
L Y+ W+ G ++C +++L + L++ ++ Q ++L +
Sbjct: 1125 LQAYKGWQLSTKEGVRASYNYCRQNFLSGRVLQEMASLKRQFTELLSDI 1173
Score = 67 (28.6 bits), Expect = 5.6e-72, Sum P(4) = 5.6e-72
Identities = 15/42 (35%), Positives = 27/42 (64%)
Query: 1158 HLHPSSAIYGLG-YTPEYVVYHELILTTKEYMQ-CA-TAVEP 1196
H+HPSS Y + + Y++YHE I T++ +++ C+ +V P
Sbjct: 1263 HIHPSSVNYQVRHFDSPYLLYHEKIKTSRVFIRDCSMVSVYP 1304
Score = 50 (22.7 bits), Expect = 4.6e-33, Sum P(3) = 4.6e-33
Identities = 16/52 (30%), Positives = 27/52 (51%)
Query: 1187 YMQCATAVEPQWLSELGPMFFSVKDSDTSMLEHKKKQKESKTAMEEEMENLR 1238
+++ A AV L + P S+K + + K K + ++TA EE E+LR
Sbjct: 731 FLEDAIAVTRYVLQDGSPYMRSMKQ----ISKEKLKARRNRTAFEEVEEDLR 778
Score = 44 (20.5 bits), Expect = 5.6e-72, Sum P(4) = 5.6e-72
Identities = 12/20 (60%), Positives = 13/20 (65%)
Query: 181 SESRGPSRRDNYD-SKGRYR 199
SESR PSR N + SKG R
Sbjct: 68 SESRRPSRPSNSNISKGESR 87
Score = 41 (19.5 bits), Expect = 1.5e-33, Sum P(4) = 1.5e-33
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 559 FSQHMKKGEAVSDFAKSKTLAEQRQ 583
F + MK EAV+ + + + EQRQ
Sbjct: 226 FGERMKISEAVNQISLDECM-EQRQ 249
Score = 37 (18.1 bits), Expect = 3.8e-33, Sum P(4) = 3.8e-33
Identities = 7/27 (25%), Positives = 14/27 (51%)
Query: 552 DFREDAKFSQHMKKGEAVSDFAKSKTL 578
+ ED + S H++ ++V D + L
Sbjct: 772 EVEEDLRLSLHLQDQDSVKDAVPDQQL 798
>ZFIN|ZDB-GENE-030131-4078 [details] [associations]
symbol:dhx57 "DEAH (Asp-Glu-Ala-Asp/His) box
polypeptide 57" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001650 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-030131-4078 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00550000074257
EMBL:BX248102 EMBL:AL935288 EMBL:CT998560 IPI:IPI00513320
Ensembl:ENSDART00000080351 ArrayExpress:F1QCB1 Bgee:F1QCB1
Uniprot:F1QCB1
Length = 1430
Score = 412 (150.1 bits), Expect = 5.8e-72, Sum P(5) = 5.8e-72
Identities = 98/349 (28%), Positives = 171/349 (48%)
Query: 775 DYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLIL 834
D VE+ ++ + + PPG +L+F+ G EI+ L E+++ R ++
Sbjct: 872 DLVESLLEWIVDGDHSYPPGAVLVFLPGLAEIKQ----LYEQLQSNRMFNNRRTNRCVVY 927
Query: 835 PIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMG 894
P++S L + Q +F + + G K I++TNIAETS+T+D + YVID+G K K Y+
Sbjct: 928 PLHSSLSNEEQQAVFTRPQNGVTKIIISTNIAETSVTIDDVVYVIDSGRMKEKRYDASRS 987
Query: 895 MDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVX 954
M++L+ VS C+ L+T + + + +PEIQR L +
Sbjct: 988 MESLEDVWVSRANALQRKGRAGRVASGVCFHLFTSHRFEHHLSQQQLPEIQRVPLEQLCL 1047
Query: 955 XXXXXXXXXXXXFD-----FMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPL 1009
D ++PP + ++ + +L LGAL + +LT LGW + P+
Sbjct: 1048 RVKVLEVFAERPLDSVFSQLIEPPTEGSLEAAKQRLCALGALTDEESLTPLGWHLACLPV 1107
Query: 1010 DPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAAREKFFVQESDHLTL 1069
D + K++L+G CLD LTI + L+ S F P D+ EE++ + F + SDHL L
Sbjct: 1108 DVRIGKLMLLGAIFRCLDPALTIAASLAFKSPFVSPWDKREEANEKKLAFSLANSDHLAL 1167
Query: 1070 LYVYQQWKEHQYRG-----DWCEEHYLHVKSLRKAREVRSQLLDILKTL 1113
+ Y+ W G +C E++L ++ L++ ++ Q ++L +
Sbjct: 1168 MQAYKGWCNAAQSGFKAGYQYCRENFLSIRGLQEIACLKRQFAELLSDI 1216
Score = 399 (145.5 bits), Expect = 5.8e-72, Sum P(5) = 5.8e-72
Identities = 83/198 (41%), Positives = 121/198 (61%)
Query: 577 TLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTN------ 630
++ EQRQ LP + R+ +L+ + +NQ G TG GKTTQ+ Q++L++ T
Sbjct: 574 SMQEQRQKLPAWQKREAILECLVKNQVLVISGMTGCGKTTQIPQFILDNFLQTGRPDRVA 633
Query: 631 GIVGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRET 690
I+ CTQPRR++A++VA RV++E LG GY IR E V T + + T GVLLR
Sbjct: 634 NII-CTQPRRISAIAVATRVAQERAEALGHSTGYQIRLETVRSSITRLMFCTTGVLLRRL 692
Query: 691 LKDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFG 750
D +L +++DE HER+ +D L +LK ++ +R D K+I+ SATLNA+ FS +F
Sbjct: 693 EGDPELSGVTHVIVDEVHERTEESDFLLLVLKDLIVKRTDLKVIMMSATLNAELFSQYFN 752
Query: 751 SVPIFHIPGRTFPVNTLY 768
+ P HIPGRTFPV +
Sbjct: 753 NCPCIHIPGRTFPVEQFF 770
Score = 71 (30.1 bits), Expect = 5.8e-72, Sum P(5) = 5.8e-72
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 1158 HLHPSSAIYGLG-YTPEYVVYHELILTTKEYMQ-CA-TAVEPQWL 1199
H+HPSS + + Y Y+VYHE + T++ +++ C+ V P L
Sbjct: 1307 HIHPSSVNFSVRHYDSPYLVYHEKVKTSRVFIRDCSMVCVYPMVL 1351
Score = 47 (21.6 bits), Expect = 5.8e-72, Sum P(5) = 5.8e-72
Identities = 12/43 (27%), Positives = 26/43 (60%)
Query: 414 SKKLSQITADNHQWEERQLLRSGAVRGTELSTEFDDEEEHKVI 456
S +S+IT NH+ +++++ + + ++ E DDE+E + I
Sbjct: 487 STSISEIT--NHRVKQKEVAQILSEDIDDVQDEGDDEDEEECI 527
Score = 43 (20.2 bits), Expect = 5.8e-72, Sum P(5) = 5.8e-72
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 39 FRAPGAKAQSGLGVRAVEKGGG 60
F+ P ++ G GVR + G G
Sbjct: 59 FKPPSSRGSRGGGVRGAQGGRG 80
Score = 40 (19.1 bits), Expect = 3.1e-71, Sum P(5) = 3.1e-71
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 433 LRSGAVRGTELSTEFDDEEEHKV 455
LR V+ TE+ TE EE K+
Sbjct: 537 LRKRMVKKTEIRTEQMQEENKKL 559
>UNIPROTKB|E2QX71 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR001650 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR009060 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940
SMART:SM00165 PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074257 CTD:90957 KO:K13026
OMA:RAYKGWQ EMBL:AAEX03010868 RefSeq:XP_540155.1
Ensembl:ENSCAFT00000010087 GeneID:483040 KEGG:cfa:483040
Uniprot:E2QX71
Length = 1382
Score = 414 (150.8 bits), Expect = 2.2e-71, Sum P(4) = 2.2e-71
Identities = 89/226 (39%), Positives = 140/226 (61%)
Query: 548 QGEIDFREDAKFSQHMKKGEAVSDFAKSKTLAEQRQYLPIFSVRDELLQVIRENQXXXXX 607
Q + + E+AK + + +A F +++ ++RQ LP + R+ +L+++ E+Q
Sbjct: 506 QAKSVYAENAKICKQFRIKQASRQF---QSILQERQSLPAWEERETILKLLSEHQVLVIS 562
Query: 608 GETGSGKTTQLTQYLLEDGYT-----TNGIVGCTQPRRVAAMSVAKRVSEEMDTELGDKV 662
G TG GKTTQ+ Q++L+D + I+ CTQPRR++A+SVA+RV++E +G V
Sbjct: 563 GMTGCGKTTQIPQFILDDSLSGPPEKVANII-CTQPRRISAISVAERVAKERTERVGLTV 621
Query: 663 GYAIRFEDVTGPSTLIKYMTDGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLFGILK 722
GY IR E V +T + Y T GVLLR D+ L I++DE HER+ +D L +LK
Sbjct: 622 GYQIRLESVKSSATRLLYCTTGVLLRRLEGDTSLQGVTHIIVDEVHERTEESDFLLLVLK 681
Query: 723 KVVARRRDFKLIVTSATLNAQKFSDFFGSVPIFHIPGRTFPVNTLY 768
+V +R + ++I+ SATLNA+ FS++F S P+ IPGRTFPV+ +
Sbjct: 682 DIVLQRPNLQVILMSATLNAELFSEYFSSCPVITIPGRTFPVDQFF 727
Score = 398 (145.2 bits), Expect = 2.2e-71, Sum P(4) = 2.2e-71
Identities = 99/349 (28%), Positives = 172/349 (49%)
Query: 775 DYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLIL 834
+ +EA ++ + + PPG IL+F+ G EI+ L E+++ R ++
Sbjct: 825 ELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKM----LYEQLQSNSLFNNRRSHRCVVH 880
Query: 835 PIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMG 894
P++S L ++ Q +F K G K I++TNIAETS+T+D + YVID+G K K Y+ G
Sbjct: 881 PLHSSLSSEEQQAVFVKPPVGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKG 940
Query: 895 MDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNV-- 952
M++L+ VS C+ L+T + +++L +PEIQR L +
Sbjct: 941 MESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHFNHQLLKQQLPEIQRVPLEQLCL 1000
Query: 953 ---VXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPL 1009
+ ++PP +++ S +L LGAL LT LG+ + P+
Sbjct: 1001 RIKILEMFSTHNLQSVFSRLIEPPHTDSLRASKIRLRDLGALTPDEKLTPLGYHLASLPV 1060
Query: 1010 DPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAAREKFFVQESDHLTL 1069
D + K++L G CLD LTI + L+ S F P D+ EE++ + +F SD+L L
Sbjct: 1061 DVRIGKLMLFGSIFRCLDPALTIAASLAFKSPFVSPWDKKEEANQKKLEFAFANSDYLAL 1120
Query: 1070 LYVYQQWKEHQYRG-----DWCEEHYLHVKSLRKAREVRSQLLDILKTL 1113
L Y+ W+ G ++C +++L + L++ ++ Q ++L +
Sbjct: 1121 LRAYKGWQLSMKEGMRASYNYCRQNFLSGRVLQEMASLKRQFTELLSDI 1169
Score = 70 (29.7 bits), Expect = 2.2e-71, Sum P(4) = 2.2e-71
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 1158 HLHPSSAIYGLG-YTPEYVVYHELILTTKEYMQ-CA-TAVEP 1196
H+HPSS Y + + Y+VYHE I T++ +++ C+ +V P
Sbjct: 1259 HIHPSSVNYQVRHFDSPYLVYHEKIKTSRVFIRDCSMVSVYP 1300
Score = 58 (25.5 bits), Expect = 1.3e-33, Sum P(3) = 1.3e-33
Identities = 18/52 (34%), Positives = 27/52 (51%)
Query: 1187 YMQCATAVEPQWLSELGPMFFSVKDSDTSMLEHKKKQKESKTAMEEEMENLR 1238
+++ A AV L + P S+K M + K K + S+TA EE E+LR
Sbjct: 727 FLEDAIAVTRYVLQDGSPYMRSMKQ----MTKEKLKARRSRTAFEEVEEDLR 774
Score = 38 (18.4 bits), Expect = 2.2e-71, Sum P(4) = 2.2e-71
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 187 SRRDNYDSKGRYRGREARDRDEPE 210
SRR + S R EAR + +PE
Sbjct: 66 SRRSSRPSNSSTRKGEARPKWKPE 89
Score = 37 (18.1 bits), Expect = 3.4e-32, Sum P(4) = 3.4e-32
Identities = 7/27 (25%), Positives = 14/27 (51%)
Query: 552 DFREDAKFSQHMKKGEAVSDFAKSKTL 578
+ ED + S H++ ++V D + L
Sbjct: 768 EVEEDLRLSLHLQHQDSVKDAVPDQQL 794
>UNIPROTKB|E1C9G0 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00642 Pfam:PF04408 Pfam:PF05773
PROSITE:PS50103 PROSITE:PS51194 SMART:SM00356 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074257 OMA:RAYKGWQ
EMBL:AADN02041257 EMBL:AADN02041258 EMBL:AADN02041259
EMBL:AADN02041260 IPI:IPI00679513 Ensembl:ENSGALT00000023376
Uniprot:E1C9G0
Length = 1380
Score = 413 (150.4 bits), Expect = 2.3e-71, Sum P(5) = 2.3e-71
Identities = 101/349 (28%), Positives = 173/349 (49%)
Query: 775 DYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLIL 834
+ +EA ++ + + PPG +LIF+ G EI+ L E+++ R ++
Sbjct: 822 ELIEALLEWIVDGKHSYPPGAVLIFLPGLAEIKM----LYEQLQSNALFNNRHSKRCVVY 877
Query: 835 PIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMG 894
P++S L ++ Q +F + G K I++TNIAETS+T+D + YVID+G K K Y+P G
Sbjct: 878 PLHSSLSSEEQQSVFLRPPAGVIKIIISTNIAETSVTIDDVVYVIDSGKMKEKRYDPSKG 937
Query: 895 MDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNV-- 952
M++L+ VS C+ L++ Y ++++ +PEIQR L +
Sbjct: 938 MESLEDTFVSRANALQRKGRAGRVASGVCFHLFSSHHYNHQLIKQQLPEIQRVPLEQLCL 997
Query: 953 ---VXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPL 1009
+ ++PP E++ S +L LGAL LT LG+ + P+
Sbjct: 998 RIKILEMFSAQSLHSVLSRLIEPPRTESLRASKLRLQDLGALTADEKLTPLGYHLASLPV 1057
Query: 1010 DPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAAREKFFVQESDHLTL 1069
D + K++L G CLD LTI + L+ S F P D+ EE++ + F V SD+L L
Sbjct: 1058 DVRIGKLMLFGTIFRCLDPALTIAASLAFKSPFVSPWDKREEANKKKLDFAVGNSDYLAL 1117
Query: 1070 LYVYQQWKEHQYRG-----DWCEEHYLHVKSLRKAREVRSQLLDILKTL 1113
L Y+ W+ G ++C E++L + L++ ++ Q ++L +
Sbjct: 1118 LQAYKGWRLSTKEGSQASYNYCRENFLSGRVLQEIASLKRQFTELLSDI 1166
Score = 396 (144.5 bits), Expect = 2.3e-71, Sum P(5) = 2.3e-71
Identities = 84/220 (38%), Positives = 131/220 (59%)
Query: 553 FREDAKFSQHMKKGEAVSDFAKSKTLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGS 612
+ E+ K + ++ F +++ +RQ LP + R+ +L ++ +Q G TG
Sbjct: 508 YNENVKICMQFRLKKSSRRF---QSMLHERQKLPAWQERETILDLLTSHQVLVVSGMTGC 564
Query: 613 GKTTQLTQYLLEDGY--TTNGIVG--CTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRF 668
GKTTQ+ Q++L+ + N + CTQPRR++A+SVA+RV++E +G VGY IR
Sbjct: 565 GKTTQIPQFILDASLQGSPNAVANIICTQPRRISAISVAERVAKERTERVGVTVGYQIRL 624
Query: 669 EDVTGPSTLIKYMTDGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARR 728
E V +T + Y T GVLLR D L +++DE HER+ +D L +LK ++ +R
Sbjct: 625 ESVKSSATRLLYCTTGVLLRRLEGDLTLQGITHVIVDEVHERTEESDFLLLVLKDIMVQR 684
Query: 729 RDFKLIVTSATLNAQKFSDFFGSVPIFHIPGRTFPVNTLY 768
D ++I+ SATLNA+ FS +F S PI +IPGRTFPV+ +
Sbjct: 685 PDLRIILMSATLNAELFSQYFHSCPIINIPGRTFPVDQFF 724
Score = 69 (29.3 bits), Expect = 2.3e-71, Sum P(5) = 2.3e-71
Identities = 17/47 (36%), Positives = 26/47 (55%)
Query: 1158 HLHPSSAIYGLG-YTPEYVVYHELILTTKEYMQCATAVEPQWLSELG 1203
H+HPSS Y + Y+VYHE I T++ +++ + V L LG
Sbjct: 1257 HIHPSSVNYQTRHFESPYLVYHEKIKTSRVFIRDCSMVSVYPLVLLG 1303
Score = 45 (20.9 bits), Expect = 2.3e-71, Sum P(5) = 2.3e-71
Identities = 17/67 (25%), Positives = 31/67 (46%)
Query: 1093 VKSLRKAREVR---SQLLD-ILKTLKIPLTSSGHDFDVVRKAICSAYFHNAARLKGV-GE 1147
VK +AR++ SQ D +L S+ +F ++ +C+A + N ++K G+
Sbjct: 1169 VKEGLRARDIERKWSQGGDGVLDATGEEANSNAENFKLISAMLCAALYPNVVQVKKPEGK 1228
Query: 1148 YINCRNG 1154
Y G
Sbjct: 1229 YQKTSTG 1235
Score = 42 (19.8 bits), Expect = 2.3e-71, Sum P(5) = 2.3e-71
Identities = 10/26 (38%), Positives = 10/26 (38%)
Query: 212 GGEYGRKRSKYDGTRRTPGRSDWDDG 237
GG GR G R WDDG
Sbjct: 37 GGGSGRSNKPQLGGNRKCSTRIWDDG 62
Score = 41 (19.5 bits), Expect = 2.7e-30, Sum P(3) = 2.7e-30
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 1218 EHKKKQKESKTAMEEEMENLR 1238
E+K + +TA EE E+LR
Sbjct: 749 ENKVTARHKRTAFEEVEEDLR 769
>UNIPROTKB|J3KR71 [details] [associations]
symbol:DHX34 "Probable ATP-dependent RNA helicase DHX34"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AC008754 HGNC:HGNC:16719
ChiTaRS:DHX34 ProteinModelPortal:J3KR71 Ensembl:ENST00000466298
Uniprot:J3KR71
Length = 576
Score = 426 (155.0 bits), Expect = 2.5e-71, Sum P(2) = 2.5e-71
Identities = 83/201 (41%), Positives = 127/201 (63%)
Query: 572 FAKSKTLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNG 631
F + L +R LPI + +LQ ++E+Q G+TG GK+TQ+ QYLL G++
Sbjct: 149 FGRLAKLQRERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSH-- 206
Query: 632 IVGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETL 691
V CTQPRR+A +S+AKRV E ++ G +VGY IRFE +T I ++T G+LLR+
Sbjct: 207 -VACTQPRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRQIQ 265
Query: 692 KDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGS 751
++ L +Y V+++DE HER L D L G+L++++ R D K+I+ SAT+N FS +F +
Sbjct: 266 REPSLPQYEVLIVDEVHERHLHNDFLLGVLQRLLPTRPDLKVILMSATINISLFSSYFSN 325
Query: 752 VPIFHIPGRTFPVNTLYSKTP 772
P+ +PGR FP+ T++ P
Sbjct: 326 APVVQVPGRLFPI-TVFDVAP 345
Score = 338 (124.0 bits), Expect = 2.5e-71, Sum P(2) = 2.5e-71
Identities = 77/214 (35%), Positives = 115/214 (53%)
Query: 839 QLPADL-QAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDA 897
Q+P L +F+ A G RKCI++TNIAETS+T+DGI +V+D+G K Y+P+ +
Sbjct: 330 QVPGRLFPITVFDVAPPGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQR 389
Query: 898 LQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXX 957
LQ F +S C+RLY ES Y + P PVPEI+R L ++V
Sbjct: 390 LQEFWISQASAEQRKGRAGRTGPGVCFRLYAESDY-DAFAPYPVPEIRRVALDSLVLQMK 448
Query: 958 XXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKML 1017
F F++PPP ++ ++ L GAL++ ALT +G + + P+D + KML
Sbjct: 449 SMSVGDPRTFPFIEPPPPASLETAILYLRDQGALDSSEALTPIGSLLAQLPVDVVIGKML 508
Query: 1018 LMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEE 1051
++G ++ VLTI + LSV S F R + E
Sbjct: 509 ILGSMFSLVEPVLTIAAALSVQSPFTRSAQSSPE 542
>TAIR|locus:2038796 [details] [associations]
symbol:AT2G01130 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00358
SMART:SM00490 SMART:SM00847 InterPro:IPR014720 GO:GO:0005524
EMBL:CP002685 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K14442 IPI:IPI00528464
RefSeq:NP_178223.2 UniGene:At.42514 ProteinModelPortal:F4IM84
SMR:F4IM84 PRIDE:F4IM84 EnsemblPlants:AT2G01130.1 GeneID:814642
KEGG:ath:AT2G01130 OMA:PSWISKV Uniprot:F4IM84
Length = 1113
Score = 408 (148.7 bits), Expect = 3.4e-71, Sum P(2) = 3.4e-71
Identities = 107/351 (30%), Positives = 173/351 (49%)
Query: 793 PGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKA 852
PG ILIF+TG D+I + LKE+++ I +++L + + Q IFE+
Sbjct: 498 PGGILIFLTGWDDISS----LKEKLQ--IHPIFGNPDLVMLLACHGSMETFEQRLIFEEP 551
Query: 853 KEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXX 912
G RK ++ATNIAETS+T++ + +VID G K Y+ L +S
Sbjct: 552 ASGVRKIVLATNIAETSITINDVAFVIDCGKAKETSYDALNNTPCLLPSWISKVSAQQRR 611
Query: 913 XXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXF--DFM 970
CY LY + Y + +PEI RT L ++ F +
Sbjct: 612 GRAGRVRPGQCYHLYPKCVY-DAFAEYQLPEILRTPLHSLCLQIKSLNLGSISEFLSRAL 670
Query: 971 DPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVL 1030
P + ++ L ++GAL+ LT LG + + P++P L KML++G LGCLD +L
Sbjct: 671 QSPELLAVQKAIAFLKIIGALDENEDLTTLGRYLSKLPMEPKLGKMLILGAILGCLDPIL 730
Query: 1031 TIVSMLSVPSVFFRPKDRAEESDAAREKFFVQESDHLTLLYVYQQWKEHQYRG---DWCE 1087
T+ + LSV F P+D+ + ++AA+ +F SDHL L+ Y+ WK+ + D+C
Sbjct: 731 TVAAGLSVRDPFLTPQDKKDLAEAAKSQFSRDHSDHLALVRAYEGWKKAEEESAVYDYCW 790
Query: 1088 EHYLHVKSLRKAREVRSQLLDILKTLKI----P--LTSSGHDFDVVRKAIC 1132
+++L ++SLR +R + +LK + P S G+D ++ R IC
Sbjct: 791 KNFLSIQSLRAIDSLRKEFFSLLKDTGLIDGNPSICNSEGNDANLTRAVIC 841
Score = 407 (148.3 bits), Expect = 3.4e-71, Sum P(2) = 3.4e-71
Identities = 84/197 (42%), Positives = 122/197 (61%)
Query: 574 KSKTLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTN-GI 632
+ + + + R LP F R +L I +NQ GETG GKTTQ+ Q++LE N G
Sbjct: 209 EGQRMLDSRTSLPAFKQRHSVLTAISQNQVIVISGETGCGKTTQIPQFILESEIEANRGA 268
Query: 633 VG---CTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRE 689
CTQPRR++AMSV++RV+ E +LG+ VGY +R E V G T + + T G+LLR
Sbjct: 269 FSSIICTQPRRISAMSVSERVAYERGEQLGESVGYKVRLEGVKGRDTRLLFCTTGILLRR 328
Query: 690 TLKDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFF 749
L D +L +++DE HER ++ D L ILK +++RR + KLI+ SATL+A+ FS +F
Sbjct: 329 LLVDRNLRGVTHVIVDEIHERGMNEDFLLIILKDLLSRRSELKLILMSATLDAELFSSYF 388
Query: 750 GSVPIFHIPGRTFPVNT 766
G + +IPG T+PV +
Sbjct: 389 GGAGVIYIPGFTYPVRS 405
>TAIR|locus:504954904 [details] [associations]
symbol:ABO6 "ABA overly sensitive 6" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA;ISS] [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA;ISS]
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00358
SMART:SM00490 SMART:SM00847 InterPro:IPR014720 GO:GO:0005524
EMBL:CP002688 GenomeReviews:BA000015_GR Gene3D:3.30.160.20
GO:GO:0005622 GO:GO:0003725 EMBL:AB005245 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 EMBL:AB008271 HOGENOM:HOG000247063
KO:K14442 EMBL:AB025625 IPI:IPI00533344 RefSeq:NP_680142.2
UniGene:At.45659 ProteinModelPortal:Q9FF84 SMR:Q9FF84 PaxDb:Q9FF84
PRIDE:Q9FF84 EnsemblPlants:AT5G04895.1 GeneID:830371
KEGG:ath:AT5G04895 TAIR:At5g04895 InParanoid:Q9FF84 OMA:MRAGHSP
PhylomeDB:Q9FF84 ProtClustDB:CLSN2680421 Genevestigator:Q9FF84
Uniprot:Q9FF84
Length = 1161
Score = 422 (153.6 bits), Expect = 2.8e-70, Sum P(3) = 2.8e-70
Identities = 86/195 (44%), Positives = 125/195 (64%)
Query: 574 KSKTLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTN-GI 632
+ +T+ E R+ LP F ++ LLQ I NQ GETG GKTTQL QY+LE + G
Sbjct: 249 EGRTMLEFRKTLPSFKDKERLLQAIARNQVIVVSGETGCGKTTQLPQYILESEIESGRGA 308
Query: 633 ---VGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRE 689
+ CTQPRR++AM+V++RVS E LG+ VG+ +R E + G +T + + T G+LLR
Sbjct: 309 FCNIICTQPRRISAMAVSERVSAERGEPLGETVGFKVRLEGMRGKNTHLLFCTSGILLRR 368
Query: 690 TLKDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFF 749
L D +L+ + +DE HER ++ D L +LK+++ RR D +L++ SATLNA+ FS+++
Sbjct: 369 LLSDRNLNGVTHVFVDEIHERGMNEDFLIIVLKELLPRRPDLRLVLMSATLNAELFSNYY 428
Query: 750 GSVPIFHIPGRTFPV 764
G P HIPG T PV
Sbjct: 429 GGAPTIHIPGFTHPV 443
Score = 382 (139.5 bits), Expect = 2.8e-70, Sum P(3) = 2.8e-70
Identities = 107/372 (28%), Positives = 176/372 (47%)
Query: 783 QAMTIHITSP--PGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQL 840
+A+ HI PG +L+F+TG D+I + +K L+ R +L+L + +
Sbjct: 527 EAVLCHICRKERPGAVLVFLTGWDDIRSLSDQIKAH--PLLGDPNR----VLLLMCHGSM 580
Query: 841 PADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQV 900
Q IFE+A RK ++ATN+AE S+T++ + +V+D G K Y+ L
Sbjct: 581 ATAEQRLIFERAPPNIRKIVLATNMAEASITINDVVFVVDCGKAKETTYDALNNTPCLLP 640
Query: 901 FPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXX 960
+S CY LY + Y + +PE+ RT L ++
Sbjct: 641 SWISQASARQRRGRAGRLFPGECYHLYPKCVY-DAFAEYQLPELLRTPLNSLCLQIKSLQ 699
Query: 961 XXXXXXF--DFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLL 1018
F + P + N++ L ++GAL+ LTDLG + P+DP L KML+
Sbjct: 700 VESIAEFLSAALQAPESLAVQNAIGFLKMIGALDEKENLTDLGKLLSILPVDPKLGKMLI 759
Query: 1019 MGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAAREKFFVQE-SDHLTLLYVYQQWK 1077
MG C D +LTIVS LSV F P+D+ + + +A+ +F ++ SDH+ L+ ++ WK
Sbjct: 760 MGAIFRCFDPILTIVSGLSVRDPFLLPQDKKDLALSAKLRFSAKDYSDHMALVRAFEGWK 819
Query: 1078 EHQYRG---DWCEEHYLHVKSLRKAREVRSQLLDILKTL-----KIPLTSS-GHDFDVVR 1128
+ + G ++C ++L ++L+ +R Q ILK + L + H+ +VR
Sbjct: 820 DAEREGSAYEFCWRNFLSAQTLQAIHSLRKQFNYILKEAGLVHDDLALNNKLSHNQSLVR 879
Query: 1129 KAICSAYFHNAA 1140
ICS F A
Sbjct: 880 AVICSGLFPGIA 891
Score = 53 (23.7 bits), Expect = 2.8e-70, Sum P(3) = 2.8e-70
Identities = 17/50 (34%), Positives = 22/50 (44%)
Query: 327 ESSQSFEDGVADETYSEEHNYEITESMRLEMEYNSDRAWYDREEGTTMFD 376
E+S SF DG E + SMR+ N R W + EG TM +
Sbjct: 215 ENSDSFLDGSVMEKVLQRR------SMRMR---NMQRTWQESPEGRTMLE 255
Score = 43 (20.2 bits), Expect = 8.5e-29, Sum P(4) = 8.5e-29
Identities = 14/38 (36%), Positives = 18/38 (47%)
Query: 270 PDARLVSPLSTPR----SNGYAASPWDHISPSPVPIRA 303
PD RLV +T SN Y +P HI P++A
Sbjct: 408 PDLRLVLMSATLNAELFSNYYGGAPTIHIPGFTHPVKA 445
Score = 41 (19.5 bits), Expect = 8.5e-29, Sum P(4) = 8.5e-29
Identities = 12/21 (57%), Positives = 13/21 (61%)
Query: 14 KTTQL----LEPEITNGGGLF 30
KTTQL LE EI +G G F
Sbjct: 289 KTTQLPQYILESEIESGRGAF 309
Score = 40 (19.1 bits), Expect = 3.4e-30, Sum P(3) = 3.4e-30
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 569 VSDFAKSKTLAEQRQYLP 586
V D+ + KT Q+Q +P
Sbjct: 465 VDDYGQEKTWKTQKQLMP 482
Score = 39 (18.8 bits), Expect = 8.3e-69, Sum P(3) = 8.3e-69
Identities = 12/45 (26%), Positives = 23/45 (51%)
Query: 475 KQAEPVMPIKDPTSDMAIISRKGSALVREIREKQTQNKSRQRFWE 519
KQ E +P D SD + GS + + ++ + + ++ QR W+
Sbjct: 207 KQTEE-LP--DENSDSFL---DGSVMEKVLQRRSMRMRNMQRTWQ 245
>UNIPROTKB|F1N1A2 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 OMA:RAYKGWQ EMBL:DAAA02030601
EMBL:DAAA02030599 EMBL:DAAA02030600 IPI:IPI00709831
Ensembl:ENSBTAT00000019540 ArrayExpress:F1N1A2 Uniprot:F1N1A2
Length = 1382
Score = 397 (144.8 bits), Expect = 5.9e-70, Sum P(3) = 5.9e-70
Identities = 86/219 (39%), Positives = 134/219 (61%)
Query: 555 EDAKFSQHMKKGEAVSDFAKSKTLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGK 614
E+ K + + +A F +++ ++RQ LP + R+ +L+++ ++Q G TG GK
Sbjct: 510 ENVKICKQFRIKQASRQF---QSVLQERQSLPAWEERENILKLLSKHQVLVVSGMTGCGK 566
Query: 615 TTQLTQYLLEDGYT-----TNGIVGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFE 669
TTQ+ Q++L+D I+ CTQPRR++A+SVA+RV++E +G VGY IR E
Sbjct: 567 TTQIPQFILDDSLNGPPEKVANII-CTQPRRISAISVAERVAKERAERVGLTVGYQIRLE 625
Query: 670 DVTGPSTLIKYMTDGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRR 729
V +T + Y T GVLLR D+ L I++DE HER+ +D L +LK +V +R
Sbjct: 626 SVKSSATRLLYCTTGVLLRRLEGDTALQGVTHIIVDEVHERTEESDFLLLVLKDIVLQRP 685
Query: 730 DFKLIVTSATLNAQKFSDFFGSVPIFHIPGRTFPVNTLY 768
++I+ SATLNA+ FS++F S P+ IPGRTFPV+ +
Sbjct: 686 TLQVILMSATLNAELFSEYFNSCPVITIPGRTFPVDQFF 724
Score = 392 (143.0 bits), Expect = 5.9e-70, Sum P(3) = 5.9e-70
Identities = 99/337 (29%), Positives = 165/337 (48%)
Query: 788 HITSP-PGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQA 846
H P PG IL+F+ G EI+ L E+++ R +I P++S L ++ Q
Sbjct: 836 HSYPPDPGAILVFLPGLAEIKM----LYEQLQSNSLFNNRRSNRCVIHPLHSSLSSEEQQ 891
Query: 847 KIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXX 906
+F K G K I++TNIAETS+T+D + YVID+G K K Y+ GM++L+ VS
Sbjct: 892 AVFVKPPMGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQA 951
Query: 907 XXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNV-----VXXXXXXXX 961
C+ L+T + +++L +PEIQR L + +
Sbjct: 952 NALQRKGRAGRVASGVCFHLFTSHHFNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSTHN 1011
Query: 962 XXXXXFDFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGE 1021
++PP +++ S +L LGAL LT LG+ + P+D + K++L G
Sbjct: 1012 LQSVFARLIEPPHADSLRASKIRLRDLGALTPDETLTPLGYHLASLPVDVRIGKLMLFGS 1071
Query: 1022 QLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAAREKFFVQESDHLTLLYVYQQWKEHQY 1081
CLD LTI + L+ S F P D+ EE++ + +F SD+L LL Y+ W+
Sbjct: 1072 IFRCLDPALTIAASLAFKSPFVSPWDKKEEANQKKLEFAFANSDYLALLRAYKGWQLSMK 1131
Query: 1082 RG-----DWCEEHYLHVKSLRKAREVRSQLLDILKTL 1113
G ++C +++L + L++ ++ Q ++L +
Sbjct: 1132 EGMRASYNYCRQNFLSGRVLQEMASLKRQFTELLSDI 1168
Score = 70 (29.7 bits), Expect = 5.9e-70, Sum P(3) = 5.9e-70
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 1158 HLHPSSAIYGLG-YTPEYVVYHELILTTKEYMQ-CA-TAVEP 1196
H+HPSS Y + + Y+VYHE I T++ +++ C+ +V P
Sbjct: 1259 HIHPSSVNYQVRHFDSPYLVYHEKIKTSRVFIRDCSMVSVYP 1300
Score = 55 (24.4 bits), Expect = 1.2e-32, Sum P(2) = 1.2e-32
Identities = 18/52 (34%), Positives = 27/52 (51%)
Query: 1187 YMQCATAVEPQWLSELGPMFFSVKDSDTSMLEHKKKQKESKTAMEEEMENLR 1238
+++ A AV L + P S+K M + K K + S+TA EE E+LR
Sbjct: 724 FLEDAIAVTRYVLQDGSPYARSMKQ----MSKEKLKARRSRTAFEEVEEDLR 771
Score = 44 (20.5 bits), Expect = 4.4e-33, Sum P(3) = 4.4e-33
Identities = 22/100 (22%), Positives = 43/100 (43%)
Query: 613 GKTTQLTQYLLEDGYTTNGIVGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVT 672
G+T + Q+ LED V Q A S+ K++S+E + FE+V
Sbjct: 715 GRTFPVDQFFLEDAIAVTRYV--LQDGSPYARSM-KQMSKEKLKARRSRTA----FEEVE 767
Query: 673 GPSTLIKYMTDGVLLRETLKDSDLDKYRVIVMDEAHERSL 712
L ++ D +++ + D LD +++ + +S+
Sbjct: 768 EDLRLSLHLQDQDSVKDAVPDQQLDFKQLLARYQGVSKSV 807
Score = 37 (18.1 bits), Expect = 2.4e-32, Sum P(3) = 2.4e-32
Identities = 7/27 (25%), Positives = 14/27 (51%)
Query: 552 DFREDAKFSQHMKKGEAVSDFAKSKTL 578
+ ED + S H++ ++V D + L
Sbjct: 765 EVEEDLRLSLHLQDQDSVKDAVPDQQL 791
>FB|FBgn0030246 [details] [associations]
symbol:CG1582 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001650 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014298 GO:GO:0008270 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 KO:K13026 EMBL:AY119481
RefSeq:NP_572663.1 UniGene:Dm.11248 SMR:Q9VZ55
EnsemblMetazoa:FBtr0073403 GeneID:32021 KEGG:dme:Dmel_CG1582
UCSC:CG1582-RA FlyBase:FBgn0030246 InParanoid:Q9VZ55 OMA:IFQCLDS
OrthoDB:EOG4RJDGG ChiTaRS:CG1582 GenomeRNAi:32021 NextBio:776414
Uniprot:Q9VZ55
Length = 1288
Score = 421 (153.3 bits), Expect = 3.2e-69, Sum P(2) = 3.2e-69
Identities = 106/356 (29%), Positives = 180/356 (50%)
Query: 775 DYVEAAVKQAMT-IHITSPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLI 833
+ +E+ +K + H G ILIF+ G EI++ +L + L S + ++
Sbjct: 733 ELIESVLKYIVEGSHDWPREGTILIFLPGFGEIQSVHDSLLDNA--LFSP---RAGKFIL 787
Query: 834 LPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKM 893
+P++S L + QA +F+KA G RK +++TNIAETS+T+D +V+D G K K ++
Sbjct: 788 VPLHSALSGEDQALVFKKAPPGKRKIVLSTNIAETSVTIDDCVFVVDCGLMKEKCFDSNR 847
Query: 894 GMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVV 953
M++L + VS C LYT Y +L PVPEIQR L +V
Sbjct: 848 NMESLDLVWVSRANAKQRKGRAGRVMPGVCIHLYTSYRYQYHILAQPVPEIQRVPLEQIV 907
Query: 954 XX-----XXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFP 1008
+ ++ P ++++L ++ +L +GAL+ LT LG + P
Sbjct: 908 LRIKTLQTFASRNTLSVLLETLEAPTEDSVLGALTRLRDVGALDAEDQLTPLGHHLAALP 967
Query: 1009 LDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAAREKFFVQESDHLT 1068
+D + K++L G CLD VLTI + LS S F P ++ E+D + F + SDHLT
Sbjct: 968 VDVRIGKLMLYGAIFQCLDSVLTIAACLSNKSPFVSPLNKRTEADKCKRMFALGNSDHLT 1027
Query: 1069 LLYVYQQWKEHQYRGDWC------EEHYLHVKSLRKAREVRSQLLDILKTLK-IPL 1117
+L Y++W + RG++ EH+L + +L +++ Q L++L ++ +P+
Sbjct: 1028 VLNAYRKWLDVARRGNYAASRNYASEHFLSLNTLETIADLKYQYLELLVSIGFVPI 1083
Score = 377 (137.8 bits), Expect = 3.2e-69, Sum P(2) = 3.2e-69
Identities = 88/241 (36%), Positives = 133/241 (55%)
Query: 550 EIDFREDAKFSQHMKKGEAVSDFAKSKTLAEQRQYLPIFSVRDELLQVIRENQXXXXXGE 609
E RE+ + Q + + K + + R+ LP F+ + +L +I + GE
Sbjct: 421 EAQTRENRRLLQQFVERRKEERYQK---IIDGRKQLPAFAEIERILALIESSPVVVISGE 477
Query: 610 TGSGKTTQLTQYLLEDGY-------TTNGI----VGCTQPRRVAAMSVAKRVSEEMDTEL 658
TG GK+TQ+ Q++L++ + + + CTQPRR++A+ VA+RV+ E +
Sbjct: 478 TGCGKSTQVPQFILDNWFFRALQLPAKENLPHVEIICTQPRRLSAIGVAERVAAERLDRI 537
Query: 659 GDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLF 718
G VGY IR E+ ST + + T G+LLR D L +++DE HERS +D L
Sbjct: 538 GQLVGYQIRLENKVSQSTRLSFCTTGILLRRLASDPLLGSVTHVIVDEVHERSEESDFLL 597
Query: 719 GILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPIFHIPGRTFPVNTLYSKTPCE--DY 776
ILK ++ R+D K+I+ SATLNA FSD+FG P+ IPGRTFPV L+ + E D+
Sbjct: 598 LILKNLLRERKDLKVILMSATLNAALFSDYFGGAPVLDIPGRTFPVQQLFLEDILEMSDF 657
Query: 777 V 777
V
Sbjct: 658 V 658
Score = 39 (18.8 bits), Expect = 6.4e-29, Sum P(2) = 6.4e-29
Identities = 12/42 (28%), Positives = 21/42 (50%)
Query: 1194 VEPQWLSELGPMFFSVKDSDTSMLEHKKKQKESKTAMEEEME 1235
V+ +L ++ M V + DT KKQ++ +E E+E
Sbjct: 643 VQQLFLEDILEMSDFVMEYDTKYCRKLKKQEQE--ILERELE 682
>UNIPROTKB|F1M8G5 [details] [associations]
symbol:Dhx57 "Protein Dhx57" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
RGD:1310340 NextBio:689608 IPI:IPI00391644
Ensembl:ENSRNOT00000037714 ArrayExpress:F1M8G5 Uniprot:F1M8G5
Length = 1338
Score = 401 (146.2 bits), Expect = 5.5e-69, Sum P(4) = 5.5e-69
Identities = 101/349 (28%), Positives = 175/349 (50%)
Query: 775 DYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLIL 834
+ +EA ++ + + PPG IL+F+ G EI+ L E+++ R +I
Sbjct: 781 ELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKM----LYEQLQSNSLFNNRRSHRCVIH 836
Query: 835 PIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMG 894
P++S L ++ Q +F K G K I++TNIAETS+T+D + YVID+G K K Y+ G
Sbjct: 837 PLHSSLSSEEQQAVFVKPPLGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDAGKG 896
Query: 895 MDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNV-- 952
M++L+ VS C+ L+T Y +++L +PEIQR L +
Sbjct: 897 MESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCL 956
Query: 953 ---VXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPL 1009
+ ++PP +++ S +L LGAL LT LG+ + P+
Sbjct: 957 RIKILEMFSTHNLQSVFSRLIEPPHVDSLRASKVRLRDLGALTPDEKLTPLGYHLASLPV 1016
Query: 1010 DPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAAREKFFVQESDHLTL 1069
D + K++L+G CLD LTI + L+ S F P D+ EE++ + +F SD+L L
Sbjct: 1017 DVRIGKLMLLGSIFRCLDPALTIAASLAFKSPFVSPWDKKEEANQKKLEFAFANSDYLAL 1076
Query: 1070 LYVYQQWK---EHQYRG--DWCEEHYLHVKSLRKAREVRSQLLDILKTL 1113
L Y+ W+ + R ++C +++L ++L++ ++ Q ++L +
Sbjct: 1077 LCAYKGWQLSTKESARASYNYCRQNFLSGRTLQEMASLKRQFTELLSDI 1125
Score = 376 (137.4 bits), Expect = 5.5e-69, Sum P(4) = 5.5e-69
Identities = 83/221 (37%), Positives = 130/221 (58%)
Query: 553 FREDAKFSQHMKKGEAVSDFAKSKTLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGS 612
F E++K + + +A F + ++RQ LP + R+ +L+++ ++Q G TG
Sbjct: 466 FAENSKICRQFQMKQASRQF---HAILQERQLLPAWEERETILKLLSKHQVVVISGMTGC 522
Query: 613 GKTTQLTQYLLEDGYT-----TNGIVGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIR 667
GKTTQ+ Q++L++ I+ CTQPRR++A+SVA+RV++E +G VGY IR
Sbjct: 523 GKTTQIPQFILDNSLNGPPERVANII-CTQPRRISAISVAERVAKERAERVGLTVGYQIR 581
Query: 668 FEDVTGPSTLIKYMTDGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVAR 727
E V +T + Y T GVLLR D+ L I++DE HER+ +D L +LK +V +
Sbjct: 582 LESVKSSATRLLYCTTGVLLRRLEGDATLQGVTHIIVDEVHERTEESDFLLLVLKDIVMQ 641
Query: 728 RRDFKLIVTSATLNAQKFSDFFGSVPIFHIPGRTFPVNTLY 768
R ++I+ SATL+A FS +F P+ IPGR FPV+ +
Sbjct: 642 RATLQVILMSATLDAGLFSKYFSYCPVITIPGRAFPVDQFF 682
Score = 67 (28.6 bits), Expect = 5.5e-69, Sum P(4) = 5.5e-69
Identities = 15/42 (35%), Positives = 27/42 (64%)
Query: 1158 HLHPSSAIYGLG-YTPEYVVYHELILTTKEYMQ-CA-TAVEP 1196
H+HPSS Y + + Y++YHE I T++ +++ C+ +V P
Sbjct: 1215 HIHPSSVNYQVRHFDSPYLLYHEKIKTSRVFIRDCSMVSVYP 1256
Score = 53 (23.7 bits), Expect = 5.5e-69, Sum P(4) = 5.5e-69
Identities = 29/116 (25%), Positives = 44/116 (37%)
Query: 193 DSKGRYRG-REARDRDEPEYGGE------YGRKRSKYDGTRRTPGRSDWDDGR--WEWED 243
D KG RG R R +GG G G+R+ R WDDG + +
Sbjct: 15 DGKGSSRGGRGGRGHVNKSHGGGGSGGGGCGGGGGGGSGSRKASNRI-WDDGDDFCVFTE 73
Query: 244 TPRREGYSNSSKRYQPSPSPMFVGASPDARLVSPLSTPRSNGYAASPWDHISPSPV 299
+ R +S + + +P GA+ + P T + PW++I P V
Sbjct: 74 SKRPSRRGSSGEEEEDAPE----GAAEQSWSAGPEPTFLPD---CRPWEYIGPEEV 122
Score = 51 (23.0 bits), Expect = 2.2e-30, Sum P(3) = 2.2e-30
Identities = 17/69 (24%), Positives = 32/69 (46%)
Query: 1170 YTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFFSVKDSDTSMLEHKKKQKESKTA 1229
Y P + + +++ A AV L + P S+K + + + K + ++TA
Sbjct: 665 YCPVITIPGRAFPVDQFFLEDALAVTRYVLQDGSPYMRSMKQ----IAKERLKARHNRTA 720
Query: 1230 MEEEMENLR 1238
+EE E+LR
Sbjct: 721 LEEVEEDLR 729
Score = 38 (18.4 bits), Expect = 6.0e-34, Sum P(4) = 6.0e-34
Identities = 7/32 (21%), Positives = 18/32 (56%)
Query: 382 FILGDDASYQKKEVELAKRLVRKDGSRMSLAQ 413
++L D + Y + ++AK ++ +R +L +
Sbjct: 692 YVLQDGSPYMRSMKQIAKERLKARHNRTALEE 723
>RGD|1308767 [details] [associations]
symbol:Dhx36 "DEAH (Asp-Glu-Ala-His) box polypeptide 36"
species:10116 "Rattus norvegicus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA;ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009615 "response to virus" evidence=IEA;ISO]
[GO:0043330 "response to exogenous dsRNA" evidence=IEA;ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1308767 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009615
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
GeneTree:ENSGT00550000074257 CTD:170506 KO:K14442 OMA:RIRNRSY
OrthoDB:EOG4K6G3J EMBL:CH474003 IPI:IPI00367998
RefSeq:NP_001101148.1 UniGene:Rn.2744 Ensembl:ENSRNOT00000019824
GeneID:310461 KEGG:rno:310461 UCSC:RGD:1308767 NextBio:662035
Uniprot:D4A2Z8
Length = 1000
Score = 401 (146.2 bits), Expect = 1.3e-68, Sum P(2) = 1.3e-68
Identities = 91/235 (38%), Positives = 140/235 (59%)
Query: 538 VDADTAVVGEQGEIDFREDAKFSQHMKKGEAVSDFAKSKTLAEQRQYLPIFSVRDELLQV 597
+D D+ + +Q E + D + + ++K + + + + R+ LP + ++ EL+ +
Sbjct: 155 IDRDSEYLLQQNEPNLGLDQQLLEDLQKKKTDPRYIEMQRF---RKKLPSYGMQKELVNL 211
Query: 598 IRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNGI-----VGCTQPRRVAAMSVAKRVSE 652
I +Q GETG GKTTQ+TQ++L D Y GI + CTQPRR++A+SVA+RV+
Sbjct: 212 INNHQVTVISGETGCGKTTQVTQFIL-DNYIERGIGSACRIVCTQPRRISAISVAERVAA 270
Query: 653 EMDTELGD--KVGYAIRFED-VTGPSTLIKYMTDGVLLRETLKDSDLDKYRVIVMDEAHE 709
E G+ GY IR + + I Y T G++L+ DS L IV+DE HE
Sbjct: 271 ERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSDSRLSSVSHIVLDEIHE 330
Query: 710 RSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPIFHIPGRTFPV 764
R+L +DVL ++K ++ R D K+I+ SATLNA+KFS++FG+ P+ HIPG TFPV
Sbjct: 331 RNLQSDVLMTVIKDLLHFRSDLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPV 385
Score = 388 (141.6 bits), Expect = 1.3e-68, Sum P(2) = 1.3e-68
Identities = 114/391 (29%), Positives = 187/391 (47%)
Query: 774 EDYVEAAVKQAMTIHIT--SPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPEL 831
+D V+ + A+ +I G IL+F+ G D I L M Q++ + R
Sbjct: 459 DDKVDLNLIAALIRYIVLEEEDGAILVFLPGWDNISTLHDLL---MSQVMFKSDR----F 511
Query: 832 LILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNP 891
LI+P++S +P Q ++F+K G RK ++ATNIAETS+T+D + YVID G K ++
Sbjct: 512 LIIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDT 571
Query: 892 KMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYT--ESAYLNEMLPSPVPEIQRTNL 949
+ + + VS CY LY ++ L++ +PEI RT L
Sbjct: 572 QNNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDY---QLPEILRTPL 628
Query: 950 GNVVXXXXXXXXXXXXXF--DFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEF 1007
+ F MDPP E ++ S+ L L AL+ LT LG +
Sbjct: 629 EELCLQIKILRLGGIAYFLSRLMDPPSDEAVVLSIKHLMELSALDKQEELTPLGVHLARL 688
Query: 1008 PLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAAREKFFVQ-ESDH 1066
P++P + KM+L G CLD VLTI + LS F P + + +DA R++ + SDH
Sbjct: 689 PVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKIADARRKELAKETRSDH 748
Query: 1067 LTLLYVYQQWKEHQYRG-----DWCEEHYLHVKSLRKAREVRSQLLDIL--------KTL 1113
LT++ ++ W+E + RG D+C E++L +L+ ++ Q + L ++
Sbjct: 749 LTVVNAFEGWEEAKRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRSP 808
Query: 1114 KIPLTSSGHDFDVVRKA-ICSAYFHNAARLK 1143
K P + D + + KA IC+ + A+++
Sbjct: 809 KDPKANINSDNEKIIKAVICAGLYPKVAKIR 839
Score = 86 (35.3 bits), Expect = 7.4e-37, Sum P(2) = 7.4e-37
Identities = 32/154 (20%), Positives = 68/154 (44%)
Query: 1080 QYRGDWCEEHYLHVKSLRKAREVRSQLLDIL--------KTLKIPLTSSGHDFDVVRKA- 1130
+Y D+C E++L +L+ ++ Q + L ++ K P + D + + KA
Sbjct: 767 RYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRSPKDPKANINSDNEKIIKAV 826
Query: 1131 ICSAYFHNAARLK-GVGEY-----INCRNGMPCHLHPSSA-IYGLGYTPEYVVYHELILT 1183
IC+ + A+++ +G+ ++ ++ +HP S + + +++YH + T
Sbjct: 827 ICAGLYPKVAKIRLNLGKKRKMVKVHTKSDGLVSIHPKSVNVEQTDFHYNWLIYHLKMRT 886
Query: 1184 TKEYMQCATAVEPQWLSELGPMFFSVKDSDTSML 1217
+ Y+ T V P L G KD D ++
Sbjct: 887 SSIYLYDCTEVSPYCLLFFGGDISIQKDKDQEII 920
Score = 39 (18.8 bits), Expect = 1.6e-30, Sum P(2) = 1.6e-30
Identities = 10/23 (43%), Positives = 12/23 (52%)
Query: 385 GDDASYQKKEVELAKRLVRKDGS 407
G+ YQ + L RL RK GS
Sbjct: 279 GNSTGYQ---IRLQSRLPRKQGS 298
>UNIPROTKB|F6V8H1 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 OMA:RIRNRSY Ensembl:ENSCAFT00000013769
EMBL:AAEX03013695 Uniprot:F6V8H1
Length = 1122
Score = 399 (145.5 bits), Expect = 2.1e-68, Sum P(2) = 2.1e-68
Identities = 92/235 (39%), Positives = 141/235 (60%)
Query: 538 VDADTAVVGEQGEIDFREDAKFSQHMKKGEAVSDFAKSKTLAEQRQYLPIFSVRDELLQV 597
+D D+ + ++ E D D + + ++K + SD + + R+ LP + ++ EL+ +
Sbjct: 277 IDRDSEYLLQENEPDVALDQQLLEDLRKKK--SDLRYIE-MQHFREKLPSYGMQKELVNM 333
Query: 598 IRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNGI-----VGCTQPRRVAAMSVAKRVSE 652
I +Q GETG GKTTQ+TQ++L+D Y G + CTQPRR++A+SVA+RV+
Sbjct: 334 IDNHQVTVISGETGCGKTTQVTQFILDD-YIERGKGSACRIVCTQPRRISAISVAERVAA 392
Query: 653 EMDTELGD--KVGYAIRFED-VTGPSTLIKYMTDGVLLRETLKDSDLDKYRVIVMDEAHE 709
E G+ GY IR + + I Y T G++L+ DS L IV+DE HE
Sbjct: 393 ERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSDSHLSSVSHIVLDEIHE 452
Query: 710 RSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPIFHIPGRTFPV 764
R+L +DVL ++K ++ R D K+I+ SATLNA+KFS++FG+ P+ HIPG TFPV
Sbjct: 453 RNLQSDVLMTVIKDLLNFRPDLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPV 507
Score = 390 (142.3 bits), Expect = 2.1e-68, Sum P(2) = 2.1e-68
Identities = 115/391 (29%), Positives = 186/391 (47%)
Query: 774 EDYVEAAVKQAMTIHIT--SPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPEL 831
+D V+ + A+ HI G IL+F+ G D I L M Q++ + R
Sbjct: 581 DDKVDLNLIAALIRHIVLEEEDGAILVFLPGWDNISTLHDLL---MSQVMFKSDR----F 633
Query: 832 LILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNP 891
LI+P++S +P Q ++F+K G RK ++ATNIAETS+T+D + YVID G K ++
Sbjct: 634 LIIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDT 693
Query: 892 KMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYT--ESAYLNEMLPSPVPEIQRTNL 949
+ + + VS CY LY ++ L++ +PEI RT L
Sbjct: 694 QNNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDY---QLPEILRTPL 750
Query: 950 GNVVXXXXXXXXXXXXXF--DFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEF 1007
+ F MDPP E + S+ L L AL+ LT LG +
Sbjct: 751 EELCLQIKILRLGGIAYFLSRLMDPPSDEAVSLSIKHLMELNALDKQEELTPLGVHLARL 810
Query: 1008 PLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAAREKFFVQ-ESDH 1066
P++P + KM+L G CLD VLTI + LS F P + + +DA R++ +SDH
Sbjct: 811 PVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKIADARRKELAKDTKSDH 870
Query: 1067 LTLLYVYQQWKEHQYRG-----DWCEEHYLHVKSLRKAREVRSQLLDIL--------KTL 1113
LT++ ++ W+E + RG D+C E++L +L+ ++ Q + L +
Sbjct: 871 LTVVNAFEGWEEARRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNP 930
Query: 1114 KIPLTSSGHDFDVVRKA-ICSAYFHNAARLK 1143
K P ++ D + + KA IC+ + A+++
Sbjct: 931 KDPKSNINSDNEKIIKAVICAGLYPKVAKIR 961
Score = 79 (32.9 bits), Expect = 1.1e-35, Sum P(2) = 1.1e-35
Identities = 32/150 (21%), Positives = 65/150 (43%)
Query: 1080 QYRGDWCEEHYLHVKSLRKAREVRSQLLDIL--------KTLKIPLTSSGHDFDVVRKA- 1130
+Y D+C E++L +L+ ++ Q + L + K P ++ D + + KA
Sbjct: 889 RYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPKDPKSNINSDNEKIIKAV 948
Query: 1131 ICSAYFHNAARLK-GVGEY-----INCRNGMPCHLHPSSA-IYGLGYTPEYVVYHELILT 1183
IC+ + A+++ +G+ + + +HP S + + +++YH + T
Sbjct: 949 ICAGLYPKVAKIRLNLGKKRKMVKVYTKTDGLVAIHPKSVNVEQTEFHYNWLIYHLKMRT 1008
Query: 1184 TKEYMQCATAVEPQWLSELGPMFFSVKDSD 1213
+ Y+ T V P L G KD+D
Sbjct: 1009 SSIYLYDCTEVSPYCLLFFGGDISIQKDND 1038
Score = 47 (21.6 bits), Expect = 2.3e-31, Sum P(2) = 2.3e-31
Identities = 13/41 (31%), Positives = 19/41 (46%)
Query: 385 GDDASYQKKEVELAKRLVRKDGSRMSLAQSKKLSQITADNH 425
G+ YQ + L RL RK GS + L + +D+H
Sbjct: 401 GNSTGYQ---IRLQSRLPRKQGSILYCTTGIILQWLQSDSH 438
>DICTYBASE|DDB_G0287351 [details] [associations]
symbol:dhx37 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=ISS] [GO:0005732 "small nucleolar ribonucleoprotein
complex" evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0287351
GO:GO:0005524 GO:GO:0005730 GenomeReviews:CM000154_GR GO:GO:0003676
GO:GO:0042254 EMBL:AAFI02000100 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0003724 KO:K14780 GO:GO:0005732
RefSeq:XP_637255.1 STRING:Q54KG8 EnsemblProtists:DDB0235265
GeneID:8626085 KEGG:ddi:DDB_G0287351 InParanoid:Q54KG8 OMA:HERNLNT
Uniprot:Q54KG8
Length = 1461
Score = 352 (129.0 bits), Expect = 3.8e-68, Sum P(4) = 3.8e-68
Identities = 77/167 (46%), Positives = 107/167 (64%)
Query: 582 RQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTN------GIVGC 635
R LPI +++ I++N GETGSGKTTQ+ Q+L E G+ GI+G
Sbjct: 402 RDNLPIMLEEHSIVEKIKDNDVVIICGETGSGKTTQVPQFLYESGFGHRESGDFPGIIGV 461
Query: 636 TQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPST-LIKYMTDGVLLRETLKDS 694
TQPRRVAA+S AKRV+EE++ E G +VGY IR++ S IK+MTDG+L+RE D
Sbjct: 462 TQPRRVAAVSTAKRVAEELNVEFGKEVGYQIRYDKKLDSSVNKIKFMTDGILMREVQTDF 521
Query: 695 DLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLN 741
L +Y I++DEAHER+L+TD+L G+L ++V R+ KL + S N
Sbjct: 522 LLSQYSSILIDEAHERNLNTDILIGLLSRIVPLRK--KLYLKSLATN 566
Score = 348 (127.6 bits), Expect = 3.8e-68, Sum P(4) = 3.8e-68
Identities = 95/324 (29%), Positives = 152/324 (46%)
Query: 831 LLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYN 890
L +LP+YS LP Q ++F+ G+R +VATN+AETSLT+ I YV+DTG K + YN
Sbjct: 846 LFVLPLYSTLPTSKQMRVFQTPPLGSRLVVVATNLAETSLTIPNIKYVVDTGRVKQRYYN 905
Query: 891 PKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLG 950
G+ + +V S CYR+Y+ + + + PEI +
Sbjct: 906 KDNGISSFEVGWTSKASADQRAGRAGRTGPGHCYRIYSSAVFNDHFQQFSKPEILMIPID 965
Query: 951 NVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALN-NVGALTDLGWKMVEFPL 1009
++ F F PP + ++ ++ L LGAL ++T+LG KM +FP+
Sbjct: 966 GMILQMKSMGIQKITGFPFPTPPDESSLKLALRTLINLGALEVKTFSITELGMKMSQFPV 1025
Query: 1010 DPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRA----EESDAAREKFFVQESD 1065
P +KMLL+G++ CL ++ IVS+L+V F + A +E+D EK + S
Sbjct: 1026 SPRHSKMLLLGQEHNCLPYIIAIVSILTVKDPFLKEAYEANQNNDENDDNNEKQQIDSSS 1085
Query: 1066 HLTLLYVYQQWKEHQYRGDWCEEHYLHVK-SLRKAREVRSQLLDILKTL---KIPLTSSG 1121
++ ++ +E Q +H ++ S+RK S LL ILK + + S
Sbjct: 1086 QSEKEFIEKEKEERQ-------KHLQRLRNSMRKWLHKESDLLSILKVVGAYDYQIRKSP 1138
Query: 1122 HDFDVVRKAICSAYFHNAARLKGV 1145
D D CS F N + +
Sbjct: 1139 KDID----HFCSQNFLNTKSMSEI 1158
Score = 149 (57.5 bits), Expect = 3.8e-68, Sum P(4) = 3.8e-68
Identities = 34/88 (38%), Positives = 50/88 (56%)
Query: 732 KLIVTSATLNAQKFSD----FFGSVPIFHIPGRTFPVNTLYSK-TPCEDYVEAAVKQAMT 786
KL+V SATL + F+ F P+ +IP R FPV ++K T +Y++ K+ +
Sbjct: 581 KLVVMSATLRVEDFTKNKTLFSRPPPVINIPTRQFPVTIHFNKKTELVNYIDECYKKVVK 640
Query: 787 IHITSPPGDILIFMTGQDEIEAACFALK 814
IH P G IL+F+TG+ EIE C L+
Sbjct: 641 IHKNLPSGGILVFVTGKQEIEYLCSKLR 668
Score = 117 (46.2 bits), Expect = 3.8e-44, Sum P(4) = 3.8e-44
Identities = 29/104 (27%), Positives = 53/104 (50%)
Query: 1102 VRSQLLDILKTLKIP--LTSSGHDFDVVRKAICSAYFHNAARLKGVGEYINCRNGMPCHL 1159
+ + L+D + +K +T H ++ C+ + N++ G G+ G C +
Sbjct: 1211 ITAGLIDQISKVKETQSITGKNHPKHLIEYQTCTTSYSNSS---GGGD------GT-CFI 1260
Query: 1160 HPSSAIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELG 1203
HP+S + G+ EYV+Y ++I T++ YM+ T + P WL LG
Sbjct: 1261 HPTSNLGGVNTQAEYVIYCDIIETSRPYMKLVTEINPSWLPLLG 1304
Score = 76 (31.8 bits), Expect = 6.5e-40, Sum P(4) = 6.5e-40
Identities = 21/79 (26%), Positives = 42/79 (53%)
Query: 1058 KFFVQESDHLTLL-----YVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQLLDILKT 1112
K+ +ESD L++L Y YQ K + +C +++L+ KS+ + ++R QL +I+ +
Sbjct: 1112 KWLHKESDLLSILKVVGAYDYQIRKSPKDIDHFCSQNFLNTKSMSEIHKLRHQLTEIVNS 1171
Query: 1113 LKIPLTSSGHDFDVVRKAI 1131
+ + H+ D + I
Sbjct: 1172 IN----QTNHELDPISNPI 1186
Score = 49 (22.3 bits), Expect = 3.8e-26, Sum P(3) = 3.8e-26
Identities = 27/143 (18%), Positives = 65/143 (45%)
Query: 329 SQSFE-DGVADETYSEEHNYEITESMRLEMEYNSDRAWYDREEGTTMFDTDSSSFILGDD 387
++ F+ D D+T++ + N++ + + + + D D E + + D FI+ D+
Sbjct: 712 AEDFDFDNTVDDTFNID-NHDDDD----DNDNDDDN---DDIENLDVLNDDQ--FIVNDE 761
Query: 388 ASYQKKEVELAKRLVRKDGSRMSLAQSKKLSQITADNHQWEERQLLRSGAVRGTELSTEF 447
+++EVE + V ++ + +++ + + + EE ++ V E +
Sbjct: 762 EEVEEEEVE--EEEVEEEEVEEEEVEEEEVEEEEVEEEEVEEEEVEEEEEVDENENNNNN 819
Query: 448 --DDEEEHKV----ILLVHDTKP 464
+DE+E ++ I+ D KP
Sbjct: 820 NNEDEDEFEIGKEDIITEDDEKP 842
Score = 45 (20.9 bits), Expect = 3.8e-68, Sum P(4) = 3.8e-68
Identities = 9/46 (19%), Positives = 22/46 (47%)
Query: 165 RDDRGSERKYLKDDTRSESRGPSRRDNYDSKGRYRGREARDRDEPE 210
R+++ ++ + D E D++ KG Y + +++D+ E
Sbjct: 153 REEKSKKKFFFWKDQDVERDYQEYNDSHQDKGSYLKDQQKEQDDSE 198
Score = 44 (20.5 bits), Expect = 3.8e-26, Sum P(2) = 3.8e-26
Identities = 14/47 (29%), Positives = 19/47 (40%)
Query: 79 IDEEEKSESSGIDEVVSNATNGKRSHASRRYRETSARDIT--DAENP 123
++EEE E +DE N N ++ E DI D E P
Sbjct: 799 VEEEEVEEEEEVDE---NENNNNNNNEDEDEFEIGKEDIITEDDEKP 842
Score = 40 (19.1 bits), Expect = 1.3e-67, Sum P(4) = 1.3e-67
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 167 DRGSERKYLKDDTRSESRGPSRRD 190
D+ +ERK L D ++ S R+
Sbjct: 31 DKHAERKVLMDQLQTNSMSEKNRE 54
Score = 40 (19.1 bits), Expect = 1.3e-67, Sum P(4) = 1.3e-67
Identities = 13/66 (19%), Positives = 33/66 (50%)
Query: 391 QKKEVELAKRLVRKDGSRMSLAQSKK--LSQITADNHQWEERQLLRSGAVRGTELSTEFD 448
+KK++ +RL ++ +K + Q+ ++ + R+LL++ A G++ + +
Sbjct: 12 KKKKLTREERLKATIRKKIDKHAERKVLMDQLQTNSMSEKNRELLKTSASIGSKETNKAS 71
Query: 449 DEEEHK 454
E + K
Sbjct: 72 IERQKK 77
>MGI|MGI:2147067 [details] [associations]
symbol:Dhx57 "DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
MGI:MGI:2147067 GO:GO:0005524 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:90957 HOVERGEN:HBG080658 KO:K13026
OMA:RAYKGWQ OrthoDB:EOG4ZS929 EMBL:AK035344 EMBL:AK053628
EMBL:AK162192 EMBL:BC026474 EMBL:BC062952 EMBL:BC065169
EMBL:BC066091 IPI:IPI00420351 IPI:IPI00453609 IPI:IPI00752611
IPI:IPI00753147 IPI:IPI00755243 RefSeq:NP_001157231.1
RefSeq:NP_945180.2 UniGene:Mm.12412 ProteinModelPortal:Q6P5D3
SMR:Q6P5D3 PhosphoSite:Q6P5D3 PaxDb:Q6P5D3 PRIDE:Q6P5D3
Ensembl:ENSMUST00000038166 Ensembl:ENSMUST00000086555 GeneID:106794
KEGG:mmu:106794 UCSC:uc008dqx.2 UCSC:uc008dqy.2 UCSC:uc008dqz.2
UCSC:uc008dra.2 UCSC:uc008drb.1 InParanoid:Q6P5D3 NextBio:358388
Bgee:Q6P5D3 CleanEx:MM_DHX57 Genevestigator:Q6P5D3
GermOnline:ENSMUSG00000035051 Uniprot:Q6P5D3
Length = 1388
Score = 399 (145.5 bits), Expect = 2.5e-67, Sum P(5) = 2.5e-67
Identities = 100/349 (28%), Positives = 174/349 (49%)
Query: 775 DYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLIL 834
+ +EA ++ + PPG +L+F+ G EI+ L E+++ R +I
Sbjct: 831 ELIEALLEWIVDGKHAYPPGAVLVFLPGLAEIKM----LYEQLQSNSLFNNRRSHRCVIH 886
Query: 835 PIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMG 894
P++S L ++ Q +F K G K I++TNIAETS+T+D + YVID+G K K Y+ G
Sbjct: 887 PLHSSLSSEEQQAVFVKPPMGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDAGKG 946
Query: 895 MDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNV-- 952
M++L+ VS C+ L+T Y +++L +PEIQR L +
Sbjct: 947 MESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCL 1006
Query: 953 ---VXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPL 1009
+ ++PP +++ S +L LGAL LT LG+ + P+
Sbjct: 1007 RIKILEMFSTHNLQSVFSRLIEPPHIDSLRASKVRLRDLGALTPDEKLTPLGYHLASLPV 1066
Query: 1010 DPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAAREKFFVQESDHLTL 1069
D + K++L+G CLD LTI + L+ S F P D+ EE++ + +F SD+L L
Sbjct: 1067 DVRIGKLMLLGSIFRCLDPALTIAASLAFKSPFVSPWDKKEEANQKKLEFAFANSDYLAL 1126
Query: 1070 LYVYQQWK---EHQYRG--DWCEEHYLHVKSLRKAREVRSQLLDILKTL 1113
L Y+ W+ + R ++C +++L ++L++ ++ Q ++L +
Sbjct: 1127 LCAYKGWQLSTKESARASYNYCRQNFLSGRTLQEMASLKRQFTELLSDI 1175
Score = 376 (137.4 bits), Expect = 2.5e-67, Sum P(5) = 2.5e-67
Identities = 83/221 (37%), Positives = 130/221 (58%)
Query: 553 FREDAKFSQHMKKGEAVSDFAKSKTLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGS 612
F E++K + + +A F + ++RQ LP + R+ +L+++ ++Q G TG
Sbjct: 516 FAENSKICRQFQMKQASRQF---HAILQERQLLPAWEERETILKLLSKHQVVVISGMTGC 572
Query: 613 GKTTQLTQYLLEDGYT-----TNGIVGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIR 667
GKTTQ+ Q++L++ I+ CTQPRR++A+SVA+RV++E +G VGY IR
Sbjct: 573 GKTTQIPQFILDNSLNGPPERVANII-CTQPRRISAISVAERVAKERAERVGLTVGYQIR 631
Query: 668 FEDVTGPSTLIKYMTDGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVAR 727
E V +T + Y T GVLLR D+ L I++DE HER+ +D L +LK +V +
Sbjct: 632 LESVKSSATRLLYCTTGVLLRRLEGDATLQGVTHIIVDEVHERTEESDFLLLVLKDIVMQ 691
Query: 728 RRDFKLIVTSATLNAQKFSDFFGSVPIFHIPGRTFPVNTLY 768
R ++I+ SATL+A FS +F P+ IPGR FPV+ +
Sbjct: 692 RATLQVILMSATLDAGLFSKYFSYCPVITIPGRAFPVDQFF 732
Score = 67 (28.6 bits), Expect = 2.5e-67, Sum P(5) = 2.5e-67
Identities = 15/42 (35%), Positives = 27/42 (64%)
Query: 1158 HLHPSSAIYGLG-YTPEYVVYHELILTTKEYMQ-CA-TAVEP 1196
H+HPSS Y + + Y++YHE I T++ +++ C+ +V P
Sbjct: 1265 HIHPSSVNYQVRHFDSPYLLYHEKIKTSRVFIRDCSMVSVYP 1306
Score = 52 (23.4 bits), Expect = 4.5e-29, Sum P(4) = 4.5e-29
Identities = 18/69 (26%), Positives = 31/69 (44%)
Query: 1170 YTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFFSVKDSDTSMLEHKKKQKESKTA 1229
Y P + + +++ A AV L + P S+K + + K K + ++TA
Sbjct: 715 YCPVITIPGRAFPVDQFFLEDALAVTRYVLQDGSPYMRSMKQ----IAKEKLKARHNRTA 770
Query: 1230 MEEEMENLR 1238
EE E+LR
Sbjct: 771 QEEVEEDLR 779
Score = 46 (21.3 bits), Expect = 2.5e-67, Sum P(5) = 2.5e-67
Identities = 17/49 (34%), Positives = 21/49 (42%)
Query: 193 DSKGRYRG-REARDRDEPEYGGEYGRKRS---KYDGTRRTPGRSDWDDG 237
D KG RG R + +GG G S G+R+ R WDDG
Sbjct: 15 DGKGSSRGGRGGKGHMNKSHGGGGGGGGSCGGGGGGSRKASNRI-WDDG 62
Score = 40 (19.1 bits), Expect = 2.5e-67, Sum P(5) = 2.5e-67
Identities = 6/11 (54%), Positives = 8/11 (72%)
Query: 289 SPWDHISPSPV 299
SPW++I P V
Sbjct: 162 SPWEYIGPEEV 172
>UNIPROTKB|F1LSC4 [details] [associations]
symbol:Dhx57 "Protein Dhx57" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:90957 KO:K13026 OMA:RAYKGWQ
IPI:IPI00369334 RefSeq:NP_001178836.1 UniGene:Rn.15951
Ensembl:ENSRNOT00000037705 GeneID:366532 KEGG:rno:366532
RGD:1310340 NextBio:689608 ArrayExpress:F1LSC4 Uniprot:F1LSC4
Length = 1391
Score = 401 (146.2 bits), Expect = 3.3e-67, Sum P(4) = 3.3e-67
Identities = 101/349 (28%), Positives = 175/349 (50%)
Query: 775 DYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLIL 834
+ +EA ++ + + PPG IL+F+ G EI+ L E+++ R +I
Sbjct: 834 ELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKM----LYEQLQSNSLFNNRRSHRCVIH 889
Query: 835 PIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMG 894
P++S L ++ Q +F K G K I++TNIAETS+T+D + YVID+G K K Y+ G
Sbjct: 890 PLHSSLSSEEQQAVFVKPPLGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDAGKG 949
Query: 895 MDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNV-- 952
M++L+ VS C+ L+T Y +++L +PEIQR L +
Sbjct: 950 MESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCL 1009
Query: 953 ---VXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPL 1009
+ ++PP +++ S +L LGAL LT LG+ + P+
Sbjct: 1010 RIKILEMFSTHNLQSVFSRLIEPPHVDSLRASKVRLRDLGALTPDEKLTPLGYHLASLPV 1069
Query: 1010 DPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAAREKFFVQESDHLTL 1069
D + K++L+G CLD LTI + L+ S F P D+ EE++ + +F SD+L L
Sbjct: 1070 DVRIGKLMLLGSIFRCLDPALTIAASLAFKSPFVSPWDKKEEANQKKLEFAFANSDYLAL 1129
Query: 1070 LYVYQQWK---EHQYRG--DWCEEHYLHVKSLRKAREVRSQLLDILKTL 1113
L Y+ W+ + R ++C +++L ++L++ ++ Q ++L +
Sbjct: 1130 LCAYKGWQLSTKESARASYNYCRQNFLSGRTLQEMASLKRQFTELLSDI 1178
Score = 376 (137.4 bits), Expect = 3.3e-67, Sum P(4) = 3.3e-67
Identities = 83/221 (37%), Positives = 130/221 (58%)
Query: 553 FREDAKFSQHMKKGEAVSDFAKSKTLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGS 612
F E++K + + +A F + ++RQ LP + R+ +L+++ ++Q G TG
Sbjct: 519 FAENSKICRQFQMKQASRQF---HAILQERQLLPAWEERETILKLLSKHQVVVISGMTGC 575
Query: 613 GKTTQLTQYLLEDGYT-----TNGIVGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIR 667
GKTTQ+ Q++L++ I+ CTQPRR++A+SVA+RV++E +G VGY IR
Sbjct: 576 GKTTQIPQFILDNSLNGPPERVANII-CTQPRRISAISVAERVAKERAERVGLTVGYQIR 634
Query: 668 FEDVTGPSTLIKYMTDGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVAR 727
E V +T + Y T GVLLR D+ L I++DE HER+ +D L +LK +V +
Sbjct: 635 LESVKSSATRLLYCTTGVLLRRLEGDATLQGVTHIIVDEVHERTEESDFLLLVLKDIVMQ 694
Query: 728 RRDFKLIVTSATLNAQKFSDFFGSVPIFHIPGRTFPVNTLY 768
R ++I+ SATL+A FS +F P+ IPGR FPV+ +
Sbjct: 695 RATLQVILMSATLDAGLFSKYFSYCPVITIPGRAFPVDQFF 735
Score = 67 (28.6 bits), Expect = 3.3e-67, Sum P(4) = 3.3e-67
Identities = 15/42 (35%), Positives = 27/42 (64%)
Query: 1158 HLHPSSAIYGLG-YTPEYVVYHELILTTKEYMQ-CA-TAVEP 1196
H+HPSS Y + + Y++YHE I T++ +++ C+ +V P
Sbjct: 1268 HIHPSSVNYQVRHFDSPYLLYHEKIKTSRVFIRDCSMVSVYP 1309
Score = 51 (23.0 bits), Expect = 1.2e-28, Sum P(3) = 1.2e-28
Identities = 17/69 (24%), Positives = 32/69 (46%)
Query: 1170 YTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFFSVKDSDTSMLEHKKKQKESKTA 1229
Y P + + +++ A AV L + P S+K + + + K + ++TA
Sbjct: 718 YCPVITIPGRAFPVDQFFLEDALAVTRYVLQDGSPYMRSMKQ----IAKERLKARHNRTA 773
Query: 1230 MEEEMENLR 1238
+EE E+LR
Sbjct: 774 LEEVEEDLR 782
Score = 38 (18.4 bits), Expect = 4.2e-33, Sum P(3) = 4.2e-33
Identities = 7/32 (21%), Positives = 18/32 (56%)
Query: 382 FILGDDASYQKKEVELAKRLVRKDGSRMSLAQ 413
++L D + Y + ++AK ++ +R +L +
Sbjct: 745 YVLQDGSPYMRSMKQIAKERLKARHNRTALEE 776
Score = 37 (18.1 bits), Expect = 3.3e-67, Sum P(4) = 3.3e-67
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 430 RQLLRSGAVRGTELSTEFDDEEE 452
R L GA G+E + ++EE+
Sbjct: 120 RDLQEQGADAGSERGSSGEEEED 142
>UNIPROTKB|E7EWK3 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0009615 GO:GO:0003725
EMBL:AC018452 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
EMBL:AC134026 HGNC:HGNC:14410 IPI:IPI00945848
ProteinModelPortal:E7EWK3 SMR:E7EWK3 Ensembl:ENST00000481941
ArrayExpress:E7EWK3 Bgee:E7EWK3 Uniprot:E7EWK3
Length = 797
Score = 388 (141.6 bits), Expect = 6.1e-67, Sum P(2) = 6.1e-67
Identities = 91/235 (38%), Positives = 139/235 (59%)
Query: 538 VDADTAVVGEQGEIDFREDAKFSQHMKKGEAVSDFAKSKTLAEQRQYLPIFSVRDELLQV 597
+D D+ + ++ E D D K + ++K + +D + + R+ LP + ++ EL+ +
Sbjct: 77 IDRDSEYLLQENEPDGTLDQKLLEDLQKKK--NDLRYIE-MQHFREKLPSYGMQKELVNL 133
Query: 598 IRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNGI-----VGCTQPRRVAAMSVAKRVSE 652
I +Q GETG GKTTQ+TQ++L D Y G + CTQPRR++A+SVA+RV+
Sbjct: 134 IDNHQVTVISGETGCGKTTQVTQFIL-DNYIERGKGSACRIVCTQPRRISAISVAERVAA 192
Query: 653 EMDTELG--DKVGYAIRFED-VTGPSTLIKYMTDGVLLRETLKDSDLDKYRVIVMDEAHE 709
E G + GY IR + + I Y T G++L+ D L IV+DE HE
Sbjct: 193 ERAESCGSGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSDPYLSSVSHIVLDEIHE 252
Query: 710 RSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPIFHIPGRTFPV 764
R+L +DVL ++K ++ R D K+I+ SATLNA+KFS++FG+ P+ HIPG TFPV
Sbjct: 253 RNLQSDVLMTVVKDLLNFRSDLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPV 307
Score = 381 (139.2 bits), Expect = 6.1e-67, Sum P(2) = 6.1e-67
Identities = 109/369 (29%), Positives = 177/369 (47%)
Query: 794 GDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAK 853
G IL+F+ G D I L M Q++ + + LI+P++S +P Q ++F++
Sbjct: 403 GAILVFLPGWDNISTLHDLL---MSQVMFKSDK----FLIIPLHSLMPTVNQTQVFKRTP 455
Query: 854 EGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXX 913
G RK ++ATNIAETS+T+D + YVID G K ++ + + + VS
Sbjct: 456 PGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKG 515
Query: 914 XXXXXXXXXCYRLYT--ESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXF--DF 969
CY LY ++ L++ +PEI RT L + F
Sbjct: 516 RAGRVQPGHCYHLYNGLRASLLDDY---QLPEILRTPLEELCLQIKILRLGGIAYFLSRL 572
Query: 970 MDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEV 1029
MDPP E +L S+ L L AL+ LT LG + P++P + KM+L G CLD V
Sbjct: 573 MDPPSNEAVLLSIRHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPV 632
Query: 1030 LTIVSMLSVPSVFFRPKDRAEESDAAREKFFVQ-ESDHLTLLYVYQQWKEHQYRG----- 1083
LTI + LS F P + + +DA R++ SDHLT++ ++ W+E + RG
Sbjct: 633 LTIAASLSFKDPFVIPLGKEKIADARRKELAKDTRSDHLTVVNAFEGWEEARRRGFRYEK 692
Query: 1084 DWCEEHYLHVKSLRKAREVRSQLLDIL--------KTLKIPLTSSGHDFDVVRKA-ICSA 1134
D+C E++L +L+ ++ Q + L + K P ++ D + + KA IC+
Sbjct: 693 DYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPKDPESNINSDNEKIIKAVICAG 752
Query: 1135 YFHNAARLK 1143
+ A+++
Sbjct: 753 LYPKVAKIR 761
Score = 39 (18.8 bits), Expect = 3.2e-30, Sum P(2) = 3.2e-30
Identities = 10/23 (43%), Positives = 12/23 (52%)
Query: 385 GDDASYQKKEVELAKRLVRKDGS 407
G+ YQ + L RL RK GS
Sbjct: 201 GNSTGYQ---IRLQSRLPRKQGS 220
>FB|FBgn0001330 [details] [associations]
symbol:kz "kurz" species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS;NAS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0004386 "helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0022008 EMBL:AE014298
GO:GO:0003723 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AL009195 GeneTree:ENSGT00550000074985 KO:K14780
OMA:AKLQPRT EMBL:X64418 PIR:T13424 RefSeq:NP_476591.1 UniGene:Dm.33
ProteinModelPortal:O46072 SMR:O46072 STRING:O46072 PaxDb:O46072
PRIDE:O46072 EnsemblMetazoa:FBtr0070419 GeneID:31205
KEGG:dme:Dmel_CG3228 UCSC:CG3228-RA CTD:31205 FlyBase:FBgn0001330
InParanoid:O46072 OrthoDB:EOG4SN03P PhylomeDB:O46072
GenomeRNAi:31205 NextBio:772445 Bgee:O46072 GermOnline:CG3228
Uniprot:O46072
Length = 1192
Score = 482 (174.7 bits), Expect = 7.7e-67, Sum P(4) = 7.7e-67
Identities = 105/233 (45%), Positives = 145/233 (62%)
Query: 582 RQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNGIVGCTQPRRV 641
R LPI + ++++ I EN GETGSGKTTQL Q+L E GY + ++G T+PRRV
Sbjct: 257 RLRLPILAEEQQVMETINENPIVIVAGETGSGKTTQLPQFLYEAGYAQHKMIGVTEPRRV 316
Query: 642 AAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDSDLDKYRV 701
AA++++KRV+ EM+ + V Y IRFE P+T IK+MTDGVLL+E D L KY V
Sbjct: 317 AAIAMSKRVAHEMNLPESE-VSYLIRFEGNVTPATRIKFMTDGVLLKEIETDFLLSKYSV 375
Query: 702 IVMDEAHERSLSTDVLFGILKKVVARR----RDFKLIVTSATLNAQKFSD----FFGSVP 753
I++DEAHERS+ TD+L G+L ++V R + KLI+ SATL F++ F P
Sbjct: 376 IILDEAHERSVYTDILVGLLSRIVPLRHKRGQPLKLIIMSATLRVSDFTENTRLFKIPPP 435
Query: 754 IFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEI 806
+ + R FPV + K +DYV A ++ + IH P G ILIF+TGQ E+
Sbjct: 436 LLKVEARQFPVTIHFQKRTPDDYVAEAYRKTLKIHNKLPEGGILIFVTGQQEV 488
Score = 264 (98.0 bits), Expect = 7.7e-67, Sum P(4) = 7.7e-67
Identities = 72/232 (31%), Positives = 108/232 (46%)
Query: 831 LLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYN 890
L +LP+YS L ++ Q +IF +G R C+V+TN+AETSLT+ I YV+D G K ++Y+
Sbjct: 617 LWVLPLYSLLSSEKQNRIFLPVPDGCRLCVVSTNVAETSLTIPHIKYVVDCGRQKTRLYD 676
Query: 891 PKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLG 950
G+ A V S CYRLY+ + Y + P+IQ+ +
Sbjct: 677 KLTGVSAFVVTYTSKASADQRAGRAGRISAGHCYRLYSSAVYNDCFEDFSQPDIQKKPVE 736
Query: 951 NVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALN-----NVG---ALTDLGW 1002
+++ F F PP Q + + +L VLGAL N A+T LG
Sbjct: 737 DLMLQMRCMGIDRVVHFPFPSPPDQVQLQAAERRLIVLGALEVAKTENTDLPPAVTRLGH 796
Query: 1003 KMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDA 1054
+ FP+ P KML + Q L + +V+ LSV V + +E A
Sbjct: 797 VISRFPVAPRFGKMLALSHQQNLLPYTVCLVAALSVQEVLIETGVQRDEDVA 848
Score = 81 (33.6 bits), Expect = 8.0e-48, Sum P(4) = 8.0e-48
Identities = 43/171 (25%), Positives = 73/171 (42%)
Query: 996 ALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFF-----RPKD--- 1047
A+T LG + FP+ P KML + Q L + +V+ LSV V R +D
Sbjct: 790 AVTRLGHVISRFPVAPRFGKMLALSHQQNLLPYTVCLVAALSVQEVLIETGVQRDEDVAP 849
Query: 1048 ------RAEESDAAREKFFVQESDHLTLLYVY--QQWKEHQYR-GDWCEEHYLHVKSLRK 1098
R +S AA + + D + LL ++ Q R ++C + L K++ +
Sbjct: 850 GANRFHRKRQSWAASGNYQLL-GDPMVLLRAVGAAEYAGSQGRLPEFCAANGLRQKAMSE 908
Query: 1099 AREVRSQLLDILKTLKIPLTSSGHDFDVVRKAICSAYFHNAARLKGVGEYI 1149
R++R QL + + L + G D ++ A F L G+G+ +
Sbjct: 909 VRKLRVQLTNEIN-LNVSDVELGVDPELKPPTDAQARFLRQILLAGMGDRV 958
Score = 79 (32.9 bits), Expect = 7.7e-67, Sum P(4) = 7.7e-67
Identities = 21/68 (30%), Positives = 36/68 (52%)
Query: 1150 NCRN-GMPCHLHPSSAIYGLGYTPEYVVYHELIL-----TTKEYMQCATAVEPQWLSELG 1203
NC + P LH SS + PE+V+Y E +TK +++ TA+EP+WL
Sbjct: 981 NCADMEEPAFLHVSSVLRQKA--PEWVIYQEAYELQNGDSTKMFIRGITAIEPEWLLLYV 1038
Query: 1204 PMFFSVKD 1211
P+ ++++
Sbjct: 1039 PLLCNIRE 1046
Score = 42 (19.8 bits), Expect = 7.7e-67, Sum P(4) = 7.7e-67
Identities = 19/78 (24%), Positives = 34/78 (43%)
Query: 383 ILGDDASYQKKEVELAKRLVRKDGSRMSLAQSKKLSQITADNHQWEERQL--------LR 434
+LGD A+ Q E EL + + L + L + A + + + L LR
Sbjct: 93 LLGDLAAVQIPEEELQQYTSISQVQTVGLKRLPTLDEYLAKKKERQAQVLAEKSSASGLR 152
Query: 435 SGAVRGTELSTEFDDEEE 452
A++G++ ++EEE
Sbjct: 153 VNAIKGSKRKLLVEEEEE 170
>MGI|MGI:1919412 [details] [associations]
symbol:Dhx36 "DEAH (Asp-Glu-Ala-His) box polypeptide 36"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IDA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009615 "response to virus"
evidence=IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0043330 "response to exogenous dsRNA" evidence=IMP]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
MGI:MGI:1919412 GO:GO:0005524 GO:GO:0005634 GO:GO:0009615
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GO:GO:0043330 EMBL:CH466530 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 CTD:170506 HOVERGEN:HBG081438
KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J EMBL:AF448804 EMBL:AC114424
EMBL:AK129373 EMBL:AK013031 IPI:IPI00351266 RefSeq:NP_082412.2
UniGene:Mm.224233 ProteinModelPortal:Q8VHK9 DIP:DIP-48576N
STRING:Q8VHK9 PhosphoSite:Q8VHK9 PaxDb:Q8VHK9 PRIDE:Q8VHK9
Ensembl:ENSMUST00000029336 GeneID:72162 KEGG:mmu:72162
UCSC:uc008pjn.2 InParanoid:Q8VHK9 ChiTaRS:DHX36 NextBio:335597
CleanEx:MM_DHX36 Genevestigator:Q8VHK9
GermOnline:ENSMUSG00000027770 Uniprot:Q8VHK9
Length = 1001
Score = 387 (141.3 bits), Expect = 9.1e-67, Sum P(2) = 9.1e-67
Identities = 88/235 (37%), Positives = 138/235 (58%)
Query: 538 VDADTAVVGEQGEIDFREDAKFSQHMKKGEAVSDFAKSKTLAEQRQYLPIFSVRDELLQV 597
+D D+ + ++ E + D + +++ + + + + R+ LP + ++ EL+ +
Sbjct: 156 IDRDSEYLLQENEPNLSLDQHLLEDLQRKKTDPRYIEMQRF---RKKLPSYGMQKELVNL 212
Query: 598 IRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNGI-----VGCTQPRRVAAMSVAKRVSE 652
I +Q GETG GKTTQ+TQ++L D Y G + CTQPRR++A+SVA+RV+
Sbjct: 213 INNHQVTVISGETGCGKTTQVTQFIL-DNYIERGKGSACRIVCTQPRRISAISVAERVAT 271
Query: 653 EMDTELGD--KVGYAIRFED-VTGPSTLIKYMTDGVLLRETLKDSDLDKYRVIVMDEAHE 709
E G+ GY IR + + I Y T G++L+ DS L IV+DE HE
Sbjct: 272 ERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSDSRLSSVSHIVLDEIHE 331
Query: 710 RSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPIFHIPGRTFPV 764
R+L +DVL ++K ++ R D K+I+ SATLNA+KFS++FG+ P+ HIPG TFPV
Sbjct: 332 RNLQSDVLMTVIKDLLHFRSDLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPV 386
Score = 385 (140.6 bits), Expect = 9.1e-67, Sum P(2) = 9.1e-67
Identities = 113/391 (28%), Positives = 187/391 (47%)
Query: 774 EDYVEAAVKQAMTIHIT--SPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPEL 831
+D V+ + A+ +I G IL+F+ G D I L M Q++ + +
Sbjct: 460 DDKVDLNLIAALIRYIVLEEEDGAILVFLPGWDNISTLHDLL---MSQVMFKSDK----F 512
Query: 832 LILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNP 891
LI+P++S +P Q ++F+K G RK ++ATNIAETS+T+D + YVID G K ++
Sbjct: 513 LIIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDT 572
Query: 892 KMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYT--ESAYLNEMLPSPVPEIQRTNL 949
+ + + VS CY LY ++ L++ +PEI RT L
Sbjct: 573 QNNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDY---QLPEILRTPL 629
Query: 950 GNVVXXXXXXXXXXXXXF--DFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEF 1007
+ F MDPP E ++ S+ L L AL+ LT LG +
Sbjct: 630 EELCLQIKILRLGGIAYFLSRLMDPPSNEAVVLSIKHLMELSALDKQEELTPLGVHLARL 689
Query: 1008 PLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAAREKFFVQ-ESDH 1066
P++P + KM+L G CLD VLTI + LS F P + + +DA R++ + SDH
Sbjct: 690 PVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKIADARRKELAKETRSDH 749
Query: 1067 LTLLYVYQQWKEHQYRG-----DWCEEHYLHVKSLRKAREVRSQLLDIL--------KTL 1113
LT++ ++ W+E + RG D+C E++L +L+ ++ Q + L ++
Sbjct: 750 LTVVNAFEGWEEAKRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRSP 809
Query: 1114 KIPLTSSGHDFDVVRKA-ICSAYFHNAARLK 1143
K P + D + + KA IC+ + A+++
Sbjct: 810 KDPKANINSDNEKIIKAVICAGLYPKVAKIR 840
Score = 86 (35.3 bits), Expect = 2.5e-35, Sum P(2) = 2.5e-35
Identities = 32/154 (20%), Positives = 68/154 (44%)
Query: 1080 QYRGDWCEEHYLHVKSLRKAREVRSQLLDIL--------KTLKIPLTSSGHDFDVVRKA- 1130
+Y D+C E++L +L+ ++ Q + L ++ K P + D + + KA
Sbjct: 768 RYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRSPKDPKANINSDNEKIIKAV 827
Query: 1131 ICSAYFHNAARLK-GVGEY-----INCRNGMPCHLHPSSA-IYGLGYTPEYVVYHELILT 1183
IC+ + A+++ +G+ ++ ++ +HP S + + +++YH + T
Sbjct: 828 ICAGLYPKVAKIRLNLGKKRKMVKVHTKSDGLVSIHPKSVNVEQTDFHYNWLIYHLKMRT 887
Query: 1184 TKEYMQCATAVEPQWLSELGPMFFSVKDSDTSML 1217
+ Y+ T V P L G KD D ++
Sbjct: 888 SSIYLYDCTEVSPYCLLFFGGDISIQKDKDQEII 921
Score = 45 (20.9 bits), Expect = 5.0e-31, Sum P(2) = 5.0e-31
Identities = 18/54 (33%), Positives = 22/54 (40%)
Query: 794 GDILIFMTGQDEIEAA----CFALKERMEQLISSTTREVPELLILPIYSQLPAD 843
GDI I EI A F ER+ L+ +E+ LL I S P D
Sbjct: 908 GDISIQKDKDQEIIAVDEWIVFQSPERIAHLVKGLRKELDSLLQEKIESPHPVD 961
Score = 39 (18.8 bits), Expect = 3.5e-30, Sum P(2) = 3.5e-30
Identities = 10/23 (43%), Positives = 12/23 (52%)
Query: 385 GDDASYQKKEVELAKRLVRKDGS 407
G+ YQ + L RL RK GS
Sbjct: 280 GNSTGYQ---IRLQSRLPRKQGS 299
>WB|WBGene00015525 [details] [associations]
symbol:rha-2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0008340 "determination
of adult lifespan" evidence=IMP] [GO:0016246 "RNA interference"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0071688 "striated muscle myosin thick filament
assembly" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0006898 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0016246 GO:GO:0071688 GO:GO:0000003 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 HOGENOM:HOG000201240 KO:K14780
OMA:AKLQPRT EMBL:FO080280 PIR:H88533 RefSeq:NP_498895.1
UniGene:Cel.10874 ProteinModelPortal:P34305 SMR:P34305
IntAct:P34305 STRING:P34305 PaxDb:P34305 EnsemblMetazoa:C06E1.10
GeneID:176207 KEGG:cel:CELE_C06E1.10 UCSC:C06E1.10 CTD:176207
WormBase:C06E1.10 InParanoid:P34305 NextBio:891582 Uniprot:P34305
Length = 1148
Score = 480 (174.0 bits), Expect = 1.4e-66, Sum P(3) = 1.4e-66
Identities = 106/252 (42%), Positives = 156/252 (61%)
Query: 574 KSKTLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNG-I 632
+SK + + R LPIF+ +++ I EN GETGSGKTTQ+ Q+L E GY + G +
Sbjct: 225 RSKEIQKSRAELPIFAEEMRIVEAINENLVTVVCGETGSGKTTQIPQFLYEAGYASEGEL 284
Query: 633 VGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLK 692
+G T+PRRVAA+++A+RV E+ D+V Y IR+E +T I +MTDGVL++E +
Sbjct: 285 IGITEPRRVAAIAMAQRVGVELAKP--DEVSYQIRYEGTRSETTNILFMTDGVLMKEMEQ 342
Query: 693 DSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARR----RDFKLIVTSATLNAQKFSD- 747
D L KY VI++DEAHERS+ +DVL G+L ++V R R +L++ SATL F+
Sbjct: 343 DVMLKKYSVILIDEAHERSMYSDVLIGMLSRIVPLRSKTARPLRLVIMSATLRLDDFTHK 402
Query: 748 --FFGSVP-IFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQD 804
F P + + R FPV+ + K +DY+ +A ++ IH T PPG IL+F+TGQ
Sbjct: 403 KLFPLLTPKVIKVDARQFPVSVHFEKRTPDDYIASAFRKTCRIHETLPPGAILVFVTGQH 462
Query: 805 EIEAACFALKER 816
E++ LK+R
Sbjct: 463 EVKQLITKLKKR 474
Score = 259 (96.2 bits), Expect = 1.4e-66, Sum P(3) = 1.4e-66
Identities = 64/230 (27%), Positives = 106/230 (46%)
Query: 816 RMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGI 875
++E I + + L LP+YS L Q ++F++ G R C+++TN+AETSLT+ G+
Sbjct: 560 KVENSIGAPPADCEPLYCLPLYSLLSMGKQRRVFDETPAGMRLCVISTNVAETSLTIPGV 619
Query: 876 FYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNE 935
YVID G+ K ++Y+ G+ V +S YRLY+ + Y +
Sbjct: 620 KYVIDGGFEKRRLYDSITGVSRFAVCRISQASGDQRAGRAGRISAGHAYRLYSSAVY-QD 678
Query: 936 MLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNV- 994
+ PEI +V F F P ++ + ++ +L LGAL+
Sbjct: 679 FVKFADPEILSKPADQLVLHLKSMNIVKVVNFPFPSAPDEQMLESAEKRLCRLGALSEST 738
Query: 995 ------GALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSV 1038
+T LG + FPL P AK + M +Q + + ++S+LSV
Sbjct: 739 KNGKTEARITKLGKTLAVFPLAPSYAKFIAMADQHNLMSHAILLISLLSV 788
Score = 96 (38.9 bits), Expect = 1.6e-49, Sum P(3) = 1.6e-49
Identities = 34/130 (26%), Positives = 60/130 (46%)
Query: 997 LTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKD-RAEESDAA 1055
+T LG + FPL P AK + M +Q + + ++S+LSV R + +
Sbjct: 747 ITKLGKTLAVFPLAPSYAKFIAMADQHNLMSHAILLISLLSVREPLIPVSSLRGDTPEET 806
Query: 1056 RE--KFFVQE-------------SDHLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAR 1100
+E K ++E D L++ ++ +Y CE+ L VK+L +AR
Sbjct: 807 KELMKNVLKERRRWCSHTGARRLGDLKVLMHAASVAEQIKYNARECEKVGLRVKALVEAR 866
Query: 1101 EVRSQLLDIL 1110
++R QL +I+
Sbjct: 867 KLRQQLTNIV 876
Score = 79 (32.9 bits), Expect = 1.4e-66, Sum P(3) = 1.4e-66
Identities = 17/56 (30%), Positives = 30/56 (53%)
Query: 1159 LHPSSAIYGLGYTPEYVVYHELI-LTTKEYMQCATAVEPQWLSELGPMFFSVKDSD 1213
+ P S ++ PE+V+Y EL+ + K+ M AV+ +WLS L + + + D
Sbjct: 944 IDPCSVVFT--EEPEFVIYQELVQVNEKKLMTSVCAVDKEWLSRLAESYCNYGEQD 997
Score = 42 (19.8 bits), Expect = 1.3e-40, Sum P(2) = 1.3e-40
Identities = 13/40 (32%), Positives = 20/40 (50%)
Query: 821 ISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCI 860
+ + R VP +++ Y L L +FEK KE T K +
Sbjct: 1026 LPNENRSVPHDIMMYRYFALFL-LDGLVFEKLKEYTPKLL 1064
>UNIPROTKB|Q9H2U1 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:CH471052 GO:GO:0009615 GO:GO:0003725 EMBL:AC018452
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
HOGENOM:HOG000247063 EMBL:AF217190 EMBL:AJ577133 EMBL:AJ577134
EMBL:AK314435 EMBL:AC134026 EMBL:BC036035 EMBL:AB040921
IPI:IPI00027415 IPI:IPI00217760 IPI:IPI00784170 PIR:D56236
RefSeq:NP_001107869.1 RefSeq:NP_065916.2 UniGene:Hs.446270
ProteinModelPortal:Q9H2U1 SMR:Q9H2U1 IntAct:Q9H2U1
MINT:MINT-3066797 STRING:Q9H2U1 PhosphoSite:Q9H2U1 DMDM:74762733
PaxDb:Q9H2U1 PRIDE:Q9H2U1 DNASU:170506 Ensembl:ENST00000308361
Ensembl:ENST00000329463 Ensembl:ENST00000496811 GeneID:170506
KEGG:hsa:170506 UCSC:uc003ezy.4 UCSC:uc003ezz.4 UCSC:uc010hvq.3
CTD:170506 GeneCards:GC03M153990 HGNC:HGNC:14410 HPA:HPA035399
MIM:612767 neXtProt:NX_Q9H2U1 PharmGKB:PA27223 HOVERGEN:HBG081438
InParanoid:Q9H2U1 KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J
PhylomeDB:Q9H2U1 GenomeRNAi:170506 NextBio:88959
ArrayExpress:Q9H2U1 Bgee:Q9H2U1 CleanEx:HS_DHX36
Genevestigator:Q9H2U1 GermOnline:ENSG00000174953 Uniprot:Q9H2U1
Length = 1008
Score = 388 (141.6 bits), Expect = 1.9e-66, Sum P(2) = 1.9e-66
Identities = 91/235 (38%), Positives = 139/235 (59%)
Query: 538 VDADTAVVGEQGEIDFREDAKFSQHMKKGEAVSDFAKSKTLAEQRQYLPIFSVRDELLQV 597
+D D+ + ++ E D D K + ++K + +D + + R+ LP + ++ EL+ +
Sbjct: 163 IDRDSEYLLQENEPDGTLDQKLLEDLQKKK--NDLRYIE-MQHFREKLPSYGMQKELVNL 219
Query: 598 IRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNGI-----VGCTQPRRVAAMSVAKRVSE 652
I +Q GETG GKTTQ+TQ++L D Y G + CTQPRR++A+SVA+RV+
Sbjct: 220 IDNHQVTVISGETGCGKTTQVTQFIL-DNYIERGKGSACRIVCTQPRRISAISVAERVAA 278
Query: 653 EMDTELG--DKVGYAIRFED-VTGPSTLIKYMTDGVLLRETLKDSDLDKYRVIVMDEAHE 709
E G + GY IR + + I Y T G++L+ D L IV+DE HE
Sbjct: 279 ERAESCGSGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSDPYLSSVSHIVLDEIHE 338
Query: 710 RSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPIFHIPGRTFPV 764
R+L +DVL ++K ++ R D K+I+ SATLNA+KFS++FG+ P+ HIPG TFPV
Sbjct: 339 RNLQSDVLMTVVKDLLNFRSDLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPV 393
Score = 381 (139.2 bits), Expect = 1.9e-66, Sum P(2) = 1.9e-66
Identities = 109/369 (29%), Positives = 177/369 (47%)
Query: 794 GDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAK 853
G IL+F+ G D I L M Q++ + + LI+P++S +P Q ++F++
Sbjct: 489 GAILVFLPGWDNISTLHDLL---MSQVMFKSDK----FLIIPLHSLMPTVNQTQVFKRTP 541
Query: 854 EGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXX 913
G RK ++ATNIAETS+T+D + YVID G K ++ + + + VS
Sbjct: 542 PGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKG 601
Query: 914 XXXXXXXXXCYRLYT--ESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXF--DF 969
CY LY ++ L++ +PEI RT L + F
Sbjct: 602 RAGRVQPGHCYHLYNGLRASLLDDY---QLPEILRTPLEELCLQIKILRLGGIAYFLSRL 658
Query: 970 MDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEV 1029
MDPP E +L S+ L L AL+ LT LG + P++P + KM+L G CLD V
Sbjct: 659 MDPPSNEAVLLSIRHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPV 718
Query: 1030 LTIVSMLSVPSVFFRPKDRAEESDAAREKFFVQ-ESDHLTLLYVYQQWKEHQYRG----- 1083
LTI + LS F P + + +DA R++ SDHLT++ ++ W+E + RG
Sbjct: 719 LTIAASLSFKDPFVIPLGKEKIADARRKELAKDTRSDHLTVVNAFEGWEEARRRGFRYEK 778
Query: 1084 DWCEEHYLHVKSLRKAREVRSQLLDIL--------KTLKIPLTSSGHDFDVVRKA-ICSA 1134
D+C E++L +L+ ++ Q + L + K P ++ D + + KA IC+
Sbjct: 779 DYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPKDPESNINSDNEKIIKAVICAG 838
Query: 1135 YFHNAARLK 1143
+ A+++
Sbjct: 839 LYPKVAKIR 847
Score = 78 (32.5 bits), Expect = 1.4e-34, Sum P(2) = 1.4e-34
Identities = 32/150 (21%), Positives = 65/150 (43%)
Query: 1080 QYRGDWCEEHYLHVKSLRKAREVRSQLLDIL--------KTLKIPLTSSGHDFDVVRKA- 1130
+Y D+C E++L +L+ ++ Q + L + K P ++ D + + KA
Sbjct: 775 RYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPKDPESNINSDNEKIIKAV 834
Query: 1131 ICSAYFHNAARLK-GVGEY-----INCRNGMPCHLHPSSA-IYGLGYTPEYVVYHELILT 1183
IC+ + A+++ +G+ + + +HP S + + +++YH + T
Sbjct: 835 ICAGLYPKVAKIRLNLGKKRKMVKVYTKTDGLVAVHPKSVNVEQTDFHYNWLIYHLKMRT 894
Query: 1184 TKEYMQCATAVEPQWLSELGPMFFSVKDSD 1213
+ Y+ T V P L G KD+D
Sbjct: 895 SSIYLYDCTEVSPYCLLFFGGDISIQKDND 924
Score = 39 (18.8 bits), Expect = 9.8e-30, Sum P(2) = 9.8e-30
Identities = 10/23 (43%), Positives = 12/23 (52%)
Query: 385 GDDASYQKKEVELAKRLVRKDGS 407
G+ YQ + L RL RK GS
Sbjct: 287 GNSTGYQ---IRLQSRLPRKQGS 306
>UNIPROTKB|Q05B79 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043330 "response to exogenous dsRNA" evidence=IEA]
[GO:0009615 "response to virus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0009615 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0043330 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 CTD:170506 HOVERGEN:HBG081438
KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J EMBL:DAAA02002574
EMBL:DAAA02002573 EMBL:BC122652 IPI:IPI00686397
RefSeq:NP_001073720.1 UniGene:Bt.103344 Ensembl:ENSBTAT00000008082
GeneID:509583 KEGG:bta:509583 InParanoid:Q05B79 NextBio:20869030
Uniprot:Q05B79
Length = 1010
Score = 390 (142.3 bits), Expect = 4.2e-65, Sum P(3) = 4.2e-65
Identities = 88/235 (37%), Positives = 139/235 (59%)
Query: 538 VDADTAVVGEQGEIDFREDAKFSQHMKKGEAVSDFAKSKTLAEQRQYLPIFSVRDELLQV 597
+D D+ + ++ E D D + + ++K + + + + E+ LP + ++ EL+ +
Sbjct: 165 IDRDSEYLLQENEPDATLDQQLLEDLQKKKTDLRYIEMQRFREK---LPSYGMQKELVNM 221
Query: 598 IRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNGI-----VGCTQPRRVAAMSVAKRVSE 652
I +Q GETG GKTTQ+TQ++L D Y G + CTQPRR++A+SVA+RV+
Sbjct: 222 IDNHQVTVISGETGCGKTTQVTQFIL-DNYIERGKGSACRIVCTQPRRISAISVAERVAA 280
Query: 653 EMDTELGD--KVGYAIRFED-VTGPSTLIKYMTDGVLLRETLKDSDLDKYRVIVMDEAHE 709
E G+ GY IR + + I Y T G++L+ D L IV+DE HE
Sbjct: 281 ERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSDPHLSSVSHIVLDEIHE 340
Query: 710 RSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPIFHIPGRTFPV 764
R+L +DVL ++K +++ R D K+++ SATLNA+KFS++FG+ P+ HIPG TFPV
Sbjct: 341 RNLQSDVLMTVVKDLLSYRPDLKVVLMSATLNAEKFSEYFGNCPMIHIPGFTFPV 395
Score = 374 (136.7 bits), Expect = 4.2e-65, Sum P(3) = 4.2e-65
Identities = 106/367 (28%), Positives = 176/367 (47%)
Query: 794 GDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAK 853
G IL+F+ G D I L M Q++ + + +I+P++S +P Q ++F++
Sbjct: 491 GAILVFLPGWDNISTLHDLL---MSQVMFKSDK----FIIIPLHSLMPTVNQTQVFKRTP 543
Query: 854 EGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXX 913
G RK ++ATNIAETS+T+D + YVID G K ++ + + + VS
Sbjct: 544 PGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKG 603
Query: 914 XXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXF--DFMD 971
CY LY S + + +PEI RT L + F MD
Sbjct: 604 RAGRVQPGHCYHLYN-SLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAHFLSRLMD 662
Query: 972 PPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLT 1031
PP E +L S+ L L AL+ LT LG + P++P + KM+L G CLD VLT
Sbjct: 663 PPSNEAVLLSIKHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLT 722
Query: 1032 IVSMLSVPSVFFRPKDRAEESDAAREKFFVQ-ESDHLTLLYVYQQWKEHQYRG-----DW 1085
I + LS F P + + +DA R++ +SDHLT++ ++ W++ + RG D+
Sbjct: 723 IAASLSFKDPFVIPLGKEKVADARRKELAKDTKSDHLTVVNAFKGWEKAKQRGFRYEKDY 782
Query: 1086 CEEHYLHVKSLRKAREVRSQLLDIL--------KTLKIPLTSSGHDFDVVRKA-ICSAYF 1136
C E++L +L+ ++ Q + L + + P ++ D + + KA IC+ +
Sbjct: 783 CWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPQDPESNINSDNEKIIKAVICAGLY 842
Query: 1137 HNAARLK 1143
A+++
Sbjct: 843 PKVAKIR 849
Score = 77 (32.2 bits), Expect = 4.1e-34, Sum P(3) = 4.1e-34
Identities = 31/150 (20%), Positives = 65/150 (43%)
Query: 1080 QYRGDWCEEHYLHVKSLRKAREVRSQLLDIL--------KTLKIPLTSSGHDFDVVRKA- 1130
+Y D+C E++L +L+ ++ Q + L + + P ++ D + + KA
Sbjct: 777 RYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPQDPESNINSDNEKIIKAV 836
Query: 1131 ICSAYFHNAARLK-GVGEY-----INCRNGMPCHLHPSSA-IYGLGYTPEYVVYHELILT 1183
IC+ + A+++ +G+ + + +HP S + + +++YH + T
Sbjct: 837 ICAGLYPKVAKIRLNLGKKRKMVKVYTKTDGVVAIHPKSVNVEQTEFNYNWLIYHLKMRT 896
Query: 1184 TKEYMQCATAVEPQWLSELGPMFFSVKDSD 1213
+ Y+ T V P L G KD+D
Sbjct: 897 SSIYLYDCTEVSPYCLLFFGGDISIQKDND 926
Score = 44 (20.5 bits), Expect = 6.2e-29, Sum P(3) = 6.2e-29
Identities = 13/41 (31%), Positives = 18/41 (43%)
Query: 385 GDDASYQKKEVELAKRLVRKDGSRMSLAQSKKLSQITADNH 425
G+ YQ + L RL RK GS + L + +D H
Sbjct: 289 GNSTGYQ---IRLQSRLPRKQGSILYCTTGIILQWLQSDPH 326
Score = 42 (19.8 bits), Expect = 4.2e-65, Sum P(3) = 4.2e-65
Identities = 15/50 (30%), Positives = 20/50 (40%)
Query: 191 NYDSKGRYRGREARDRDEPE-YGGEYGRKRSK-YDGTRRTPGRSDWDDGR 238
+YD + GR+ R YGG YG + G R + G GR
Sbjct: 2 SYDYHQNW-GRDGGPRSSGGGYGGSYGGSHGGGHGGNRGSGGGGGGGGGR 50
>UNIPROTKB|E1C550 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003725 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0043330 GeneTree:ENSGT00550000074257
OMA:GRIAYND EMBL:AADN02021100 IPI:IPI00601151
Ensembl:ENSGALT00000016841 Uniprot:E1C550
Length = 985
Score = 382 (139.5 bits), Expect = 1.3e-64, Sum P(3) = 1.3e-64
Identities = 89/237 (37%), Positives = 138/237 (58%)
Query: 538 VDADTAVVGEQGEIDFREDAKFSQHMKKGEAVSDFAKSKTLAEQRQYLPIFSVRD--ELL 595
+D D + E+ + D D + + ++K ++ + + + E+ LP + +R EL+
Sbjct: 142 LDQDVEYLFEKNDQDADLDEQLKEDLRKKKSDPRYIEMQRFREK---LPSYGMRQKQELV 198
Query: 596 QVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNGI-----VGCTQPRRVAAMSVAKRV 650
+I N+ GETG GKTTQ+TQ++L+D Y G + CTQPRR++A+SVA+RV
Sbjct: 199 NLINNNRVTVISGETGCGKTTQVTQFILDD-YIERGKGSTCRIVCTQPRRISAISVAERV 257
Query: 651 SEEMDTELGD--KVGYAIRFED-VTGPSTLIKYMTDGVLLRETLKDSDLDKYRVIVMDEA 707
+ E G+ GY IR + + I Y T G++L+ D L +V+DE
Sbjct: 258 AAERAEACGNGKSTGYQIRLQSRLPRKQGSILYCTTGIVLQWLQSDKHLSSISHVVLDEI 317
Query: 708 HERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPIFHIPGRTFPV 764
HER+L +DVL I+K ++ R D K+I+ SATLNA+KFS++F + P+ HIPG TFPV
Sbjct: 318 HERNLQSDVLMSIIKDLLNVRLDLKVILMSATLNAEKFSEYFDNCPMIHIPGFTFPV 374
Score = 382 (139.5 bits), Expect = 1.3e-64, Sum P(3) = 1.3e-64
Identities = 111/391 (28%), Positives = 188/391 (48%)
Query: 774 EDYVEAAVKQAMTIHIT--SPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPEL 831
+D V+ + A+ HI G IL+F+ G D I L M Q++ + R
Sbjct: 448 DDKVDLDLIAALIRHIVLEEEDGAILVFLPGWDNISTLHDLL---MSQVMFKSDR----F 500
Query: 832 LILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNP 891
+I+P++S +P Q ++F+K G RK ++ATNIAETS+T+D + +VID G K ++
Sbjct: 501 IIIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVFVIDGGKIKETHFDT 560
Query: 892 KMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYT--ESAYLNEMLPSPVPEIQRTNL 949
+ + + VS CY LY ++ L++ +PEI RT L
Sbjct: 561 QNNISTMAAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDY---QLPEILRTPL 617
Query: 950 GNVVXXXXXXXXXXXXXF--DFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEF 1007
+ F MDPP ++ ++ ++ L L AL+ LT LG +
Sbjct: 618 EELCLQIKILKLGGIAYFLSKLMDPPSRDAVMLAINHLMELNALDRQEELTPLGVHLARL 677
Query: 1008 PLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAAREKFFVQ-ESDH 1066
P++P + KM+L G CLD VLTI + LS F P + + +DA R++ +SDH
Sbjct: 678 PVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKVADARRKELSKNTKSDH 737
Query: 1067 LTLLYVYQQWKEHQYRG-----DWCEEHYLHVKSLRKAREVRSQLLDIL--------KTL 1113
LT++ + W+E + RG D+C E++L +L+ ++ Q + L +
Sbjct: 738 LTVVNAFTGWEETRRRGFRTEKDYCWEYFLSPNTLQMLHNMKGQFAEHLLAAGFVNSRDP 797
Query: 1114 KIPLTSSGHDFDVVRKA-ICSAYFHNAARLK 1143
K P +++ D + + KA IC+ + A+++
Sbjct: 798 KDPKSNTNSDNEKLLKAVICAGLYPKVAKIR 828
Score = 72 (30.4 bits), Expect = 2.9e-32, Sum P(3) = 2.9e-32
Identities = 32/146 (21%), Positives = 63/146 (43%)
Query: 1084 DWCEEHYLHVKSLRKAREVRSQLLDIL--------KTLKIPLTSSGHDFDVVRKA-ICSA 1134
D+C E++L +L+ ++ Q + L + K P +++ D + + KA IC+
Sbjct: 760 DYCWEYFLSPNTLQMLHNMKGQFAEHLLAAGFVNSRDPKDPKSNTNSDNEKLLKAVICAG 819
Query: 1135 YFHNAARLKGV----GEYIN-C-RNGMPCHLHPSSA-IYGLGYTPEYVVYHELILTTKEY 1187
+ A+++ + + C + ++HP S + + ++VYH + T+ Y
Sbjct: 820 LYPKVAKIRPSFSKKRKMVKVCTKTDGTVNIHPKSVNVEETEFHYNWLVYHLKMRTSSIY 879
Query: 1188 MQCATAVEPQWLSELGPMFFSVKDSD 1213
+ T V P L G KD D
Sbjct: 880 LYDCTEVSPYCLLFFGGDISIQKDKD 905
Score = 45 (20.9 bits), Expect = 1.8e-29, Sum P(3) = 1.8e-29
Identities = 13/41 (31%), Positives = 17/41 (41%)
Query: 385 GDDASYQKKEVELAKRLVRKDGSRMSLAQSKKLSQITADNH 425
G YQ + L RL RK GS + L + +D H
Sbjct: 268 GKSTGYQ---IRLQSRLPRKQGSILYCTTGIVLQWLQSDKH 305
Score = 37 (18.1 bits), Expect = 1.3e-64, Sum P(3) = 1.3e-64
Identities = 6/14 (42%), Positives = 9/14 (64%)
Query: 365 WYDREEGTTMFDTD 378
WY R++G +TD
Sbjct: 53 WYARKQGQKSKETD 66
>UNIPROTKB|F1NH89 [details] [associations]
symbol:LOC768812 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 PROSITE:PS51194
GO:GO:0005524 GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00650000093246 OMA:LACEQDI EMBL:AADN02057061
EMBL:AADN02057062 IPI:IPI00683398 Ensembl:ENSGALT00000023318
Uniprot:F1NH89
Length = 764
Score = 658 (236.7 bits), Expect = 1.3e-63, P = 1.3e-63
Identities = 172/654 (26%), Positives = 313/654 (47%)
Query: 578 LAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTT---NGIVG 634
L ++RQ LP++ VR ++ + +Q G+ +GK++Q+ Q+ E +G
Sbjct: 65 LMKERQELPVWKVRCAFMESLLHHQIVIVSGDAKTGKSSQVPQWCAEHCLAAGCRHGAAV 124
Query: 635 CTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDS 694
C+Q A+ +A R ++EMD +G +VGY + FE T+++Y TD +L RE +
Sbjct: 125 CSQAHGQVAVRLALRAADEMDVNIGHEVGYFVPFESCCTAETILRYCTDDMLQREMMSAP 184
Query: 695 DLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPI 754
L+ Y VI++D+ HER++ TDVL G+LK V+ R +L++ +A + K DF GSVP+
Sbjct: 185 LLNSYGVIILDDVHERTVPTDVLLGVLKHVLRARPALRLVILTAPHMSSKLQDFCGSVPL 244
Query: 755 FHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALK 814
+ +Y+ + +D+ +A++ +H T GDI+IF+ + +I+ A +
Sbjct: 245 IRVENE-HQAEVVYTCSMPKDHFLSALRLLFELHHTKEKGDIVIFLACEQDIDKAYQMI- 302
Query: 815 ERMEQLISSTTREVPELLILPIYSQ----LPADLQ--AKIFEKAKEGTRKCIVATNIAET 868
R EQ S++ ++ EL+ +P+Y +P Q K ++K + RK ++ T+ +
Sbjct: 303 -RQEQ--SNSNPDLGELIPVPLYPTRNDLIPKPNQDKQKCYQKYR---RKVLLTTSSGGS 356
Query: 869 SLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYT 928
+ + I +VID G + KVYNP++ D++ P+S + LY
Sbjct: 357 LIRIKNITFVIDVGVERRKVYNPRIRADSVTTQPISKAQAEMHKQILSTSPSGKLFCLYP 416
Query: 929 ESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPP-QENILNSMYQLWV 987
E EM P +IQ +NL ++V +F+ P + + +
Sbjct: 417 EEFTYKEMKPDFPAKIQESNLTSMVLFLKRMDIAGFRHCEFLSRPVCPPSAKHGIRSTGK 476
Query: 988 LGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKD 1047
G+++ + F + + L + C EVL I +L P+ F
Sbjct: 477 THQTRRQGSISAHSYLSQNFGILNKKGESLSVPCSFTCHTEVLPIHVLLHAPNCFLHTPS 536
Query: 1048 RAEE-SDAAREKFFVQESDHLTLLYVYQQWKEHQYRG--------DWCEEHYLHVKSLRK 1098
EE + KF DH TL+ V+ ++E WC ++L +LR
Sbjct: 537 GTEEIALTCWRKFSHPAGDHFTLINVFNAFREASTNSAGQCCSNEKWCRNYFLSCSALRM 596
Query: 1099 AREVRSQLLDILKTLKIPLTS----SGHDFDVVRKAICSAYFHNAAR-LKGVGEYINCRN 1153
A +R++L++I+K +++P+++ S + ++KA+ S YF AR + G G Y+ +
Sbjct: 597 AEMIRAELVEIMKRIELPISAPDFGSPENTLSIKKALLSGYFMQIARDVDGSGNYLMLTH 656
Query: 1154 GMPCHLHPSSAIYGLGYTPEYVVYHELILTTKEYMQCATAVEPQWLSELGPMFF 1207
LHP S+ Y +PE+V++HE ++ ++ + + P EL P ++
Sbjct: 657 RQVAKLHPFSSYYYTRRSPEWVLFHEFSISEDNSIRVVSEISPHLFVELAPQYY 710
>MGI|MGI:2145374 [details] [associations]
symbol:Dhx29 "DEAH (Asp-Glu-Ala-His) box polypeptide 29"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0006412 "translation"
evidence=IEA] [GO:0006413 "translational initiation" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:2145374
GO:GO:0005739 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 CTD:54505 HOGENOM:HOG000247063
HOVERGEN:HBG081436 OMA:WLLYQEK OrthoDB:EOG43FGW2 EMBL:BC057112
EMBL:BC082319 EMBL:AK028342 EMBL:AK042066 EMBL:AK042497
EMBL:AK049530 IPI:IPI00410936 RefSeq:NP_766182.2 UniGene:Mm.35094
ProteinModelPortal:Q6PGC1 SMR:Q6PGC1 STRING:Q6PGC1
PhosphoSite:Q6PGC1 PaxDb:Q6PGC1 PRIDE:Q6PGC1
Ensembl:ENSMUST00000038574 GeneID:218629 KEGG:mmu:218629
UCSC:uc007rwx.1 GeneTree:ENSGT00550000074257 InParanoid:Q6PGC1
NextBio:376359 Bgee:Q6PGC1 CleanEx:MM_DHX29 Genevestigator:Q6PGC1
GermOnline:ENSMUSG00000042426 Uniprot:Q6PGC1
Length = 1365
Score = 386 (140.9 bits), Expect = 2.0e-63, Sum P(4) = 2.0e-63
Identities = 100/290 (34%), Positives = 159/290 (54%)
Query: 500 LVREIREKQTQNKSRQRFWELAGSQMGNILGVKKTAEQVDADTAVVGEQGEIDFREDAKF 559
L+ +++++Q Q + ++ E GS+ +++ E + +D + E ED
Sbjct: 493 LLNKLKQQQQQQQQQRPESEKGGSE-----DPEESWENLVSDEDLAALSLEPTSAEDLAP 547
Query: 560 SQHMKKGEAVSDFAKSKTLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLT 619
+ + + + K + L ++RQ LP+F RD +++ ++ ++ GETGSGK+TQ+
Sbjct: 548 VRSLFR--RLQSTPKYQRLLKERQQLPVFKHRDSIVETLKRHRVVVVAGETGSGKSTQVP 605
Query: 620 QYLLED------GYTTNGIVGCTQPRRVAAMSVAKRVSEEMDTELG-----DKVGYAIRF 668
+LLED G IV CTQPRR++A+S+A RV EE+ E G GY IR
Sbjct: 606 HFLLEDLLLDECGARKCNIV-CTQPRRISAVSLATRVCEELGCESGPGGRNSLCGYQIRM 664
Query: 669 EDVTGPSTLIKYMTDGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARR 728
E ST + Y T GVLLR+ +D L +++DE HERS+ +D L ILK+++ +R
Sbjct: 665 ESRASESTRLLYCTTGVLLRKLQEDGLLADVSHVIVDEVHERSVQSDFLLVILKEILQKR 724
Query: 729 RDFKLIVTSATLNAQKFSDFFGSVPIFHIPGRTFPVNTLYSKTPCEDYVE 778
D LI+ SAT+++ KFS +F PI I GR++PV + ED VE
Sbjct: 725 SDLHLILMSATVDSDKFSTYFTHCPILRISGRSYPVEVFH----LEDIVE 770
Score = 361 (132.1 bits), Expect = 2.0e-63, Sum P(4) = 2.0e-63
Identities = 109/362 (30%), Positives = 166/362 (45%)
Query: 794 GDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELL-ILPIYSQLPADLQAKIFEKA 852
G +LIF+ G I+ ++ L+SS R E ++ ++S L QA F
Sbjct: 867 GAVLIFLPGLAHIQ--------QLYDLLSSDRRFYSERYQVIALHSVLSTQDQAAAFMFP 918
Query: 853 KEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXX 912
G RK ++ATNIAET +T+ + +VIDTG K Y+ M +L VS
Sbjct: 919 PPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQ 978
Query: 913 XXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXF--DFM 970
C+RLYT + L VPEI R L + F +
Sbjct: 979 GRAGRVRDGFCFRLYTRERF-EGFLDYSVPEILRVPLEELCLHIMKCDLGSPEDFLSKAL 1037
Query: 971 DPPPQENILNSMYQLWVLGALN-NVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEV 1029
DPP + I N+M L +GA N LT LG + P++ + KML+ G GCL+ V
Sbjct: 1038 DPPQLQVISNAMNLLRKIGACEPNEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLEPV 1097
Query: 1030 LTIVSMLSVPSVFFRPKDRAEESDAAREKFFVQESDHLTLLYVYQQWKEHQYRG------ 1083
T+ ++++ S F P R +E+D A+ V +SDHLT+ Y WK+ Q G
Sbjct: 1098 ATLAAVMTEKSPFITPIGRKDEADLAKSSLAVADSDHLTIYNAYLGWKKAQQEGGFRSEI 1157
Query: 1084 DWCEEHYLHVKSLRKAREVRSQLLDILKTLKIPLTSSGHDFDVVRKAICSAYFHNAARLK 1143
+C+ ++L+ SL +V+ +L+ ++K SS ++ RK + F + A LK
Sbjct: 1158 SYCQRNFLNRTSLLTLEDVKQELMKLVKAAGF---SSSPSWEG-RKGPQTLSFQDIALLK 1213
Query: 1144 GV 1145
V
Sbjct: 1214 AV 1215
Score = 51 (23.0 bits), Expect = 2.0e-63, Sum P(4) = 2.0e-63
Identities = 18/73 (24%), Positives = 33/73 (45%)
Query: 1124 FDVVRKAICSAYFHNAARLKGVGEYINCRNGMPCHLHPSSAIYGLGYTPEYVVYHELILT 1183
+D V K +C+ +L + + G +HPSS L T +++Y E +
Sbjct: 1221 YDSVGKIMCTKSVDVTEKLACM---VETAQGK-AQVHPSSVNRDL-QTYGWLLYQEKVRY 1275
Query: 1184 TKEYMQCATAVEP 1196
T+ Y++ T + P
Sbjct: 1276 TRVYLRETTLITP 1288
Score = 47 (21.6 bits), Expect = 2.0e-63, Sum P(4) = 2.0e-63
Identities = 11/33 (33%), Positives = 13/33 (39%)
Query: 248 EGYSNSSKRYQPSPSPMFVGASPDARLVSPLST 280
EG+S + QP P F A L P T
Sbjct: 171 EGFSQEFEEQQPKSRPKFQSVQIQATLSPPQQT 203
Score = 43 (20.2 bits), Expect = 5.3e-63, Sum P(4) = 5.3e-63
Identities = 16/47 (34%), Positives = 25/47 (53%)
Query: 80 DEEEKSESS-GIDEVVSNATNGKRSHASRRYRETSARDITDAENPMA 125
DEEEK E S G++E ++ ++RY +AR + DA+ A
Sbjct: 239 DEEEKGEGSKGLEEE-------EKFDPNQRYLNLAAR-LLDAKEQAA 277
Score = 43 (20.2 bits), Expect = 5.3e-63, Sum P(4) = 5.3e-63
Identities = 11/46 (23%), Positives = 21/46 (45%)
Query: 177 DDTRSE-SRGPSRRDNYDSKGRYRGREARDRDEPEYGGEYGRKRSK 221
++ + E S+G + +D RY AR D E + +++K
Sbjct: 240 EEEKGEGSKGLEEEEKFDPNQRYLNLAARLLDAKEQAAAFKLEKNK 285
Score = 38 (18.4 bits), Expect = 1.7e-62, Sum P(4) = 1.7e-62
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 34 KERPIFRAPGAKAQSGLGVRAVEKGGGS 61
K++P AP +A+S L + EK +
Sbjct: 324 KKKP---APATEAESALNLNLFEKSAAA 348
>UNIPROTKB|E1B9N7 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:WLLYQEK GeneTree:ENSGT00550000074257
EMBL:DAAA02050346 IPI:IPI00907457 Ensembl:ENSBTAT00000013897
ArrayExpress:E1B9N7 Uniprot:E1B9N7
Length = 1367
Score = 381 (139.2 bits), Expect = 8.9e-63, Sum P(3) = 8.9e-63
Identities = 87/216 (40%), Positives = 128/216 (59%)
Query: 574 KSKTLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLED------GY 627
K + L ++RQ LP+F R +++ ++ ++ GETGSGK+TQ+ +LLED G
Sbjct: 558 KYQRLLKERQQLPVFKHRSSVVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNEWGT 617
Query: 628 TTNGIVGCTQPRRVAAMSVAKRVSEEMDTELG-----DKVGYAIRFEDVTGPSTLIKYMT 682
T IV CTQPRR++A+S+A RV +E+ E G GY IR E ST + Y T
Sbjct: 618 TKCNIV-CTQPRRISAVSLATRVCDELGCENGPGGKNSLCGYQIRMESRASESTRLLYCT 676
Query: 683 DGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNA 742
GVLLR+ +D L +++DE HERS+ +D L ILK+++ +R D LI+ SAT++
Sbjct: 677 TGVLLRKLQEDGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSATVDC 736
Query: 743 QKFSDFFGSVPIFHIPGRTFPVNTLYSKTPCEDYVE 778
+KFS +F PI I GR++PV + ED +E
Sbjct: 737 EKFSTYFTHCPILRISGRSYPVEVFH----LEDIIE 768
Score = 364 (133.2 bits), Expect = 8.9e-63, Sum P(3) = 8.9e-63
Identities = 108/362 (29%), Positives = 170/362 (46%)
Query: 794 GDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELL-ILPIYSQLPADLQAKIFEKA 852
G +LIF+ G I+ ++ L+S+ R E ++ ++S L QA F
Sbjct: 865 GAVLIFLPGLAHIQ--------QLYDLLSTDRRFFSERYKVIALHSILSTQDQAAAFTLP 916
Query: 853 KEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXX 912
+G RK ++ATNIAET +T+ + +VIDTG K Y+ M +L VS
Sbjct: 917 PQGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQ 976
Query: 913 XXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXF--DFM 970
C+R+YT + M S VPEI R L + F +
Sbjct: 977 GRAGRVRDGFCFRMYTRERFEGFMDYS-VPEILRVPLEELCLHIMKCNLGSPEDFLSKAL 1035
Query: 971 DPPPQENILNSMYQLWVLGALN-NVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEV 1029
DPP + I N+M L +GA N LT LG + P++ + KML+ G GCLD V
Sbjct: 1036 DPPQLQVISNAMNLLRKIGACELNEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPV 1095
Query: 1030 LTIVSMLSVPSVFFRPKDRAEESDAAREKFFVQESDHLTLLYVYQQWK----EHQYRGD- 1084
T+ ++++ S F P R +E+D A+ + +SDHLT+ Y WK E YR +
Sbjct: 1096 ATLAAVMTEKSPFITPIGRKDEADLAKSALAMADSDHLTIYNAYLGWKKARQEGGYRSEI 1155
Query: 1085 -WCEEHYLHVKSLRKAREVRSQLLDILKTLKIPLTSSGHDFDVVRKAICSAYFHNAARLK 1143
+C +++L+ SL +V+ +L+ ++K +++ + F+ R A + F A LK
Sbjct: 1156 AYCRKNFLNRTSLLTLEDVKQELIKLVKAAGFLSSTTSNSFEGNR-ATQTLSFQEIALLK 1214
Query: 1144 GV 1145
V
Sbjct: 1215 AV 1216
Score = 46 (21.3 bits), Expect = 8.9e-63, Sum P(3) = 8.9e-63
Identities = 12/43 (27%), Positives = 17/43 (39%)
Query: 248 EGYSNSSKRYQPSPSPMFVGASPDARLVSPLSTPRSNGYAASP 290
EG+S + QP P F A + PL P++ P
Sbjct: 171 EGFSQEFEEQQPKSRPKFQYPQTQATISPPLQ-PKTKKREEDP 212
Score = 37 (18.1 bits), Expect = 7.8e-62, Sum P(3) = 7.8e-62
Identities = 9/46 (19%), Positives = 21/46 (45%)
Query: 176 KDDTRSESRGPSRRDNYDSKGRYRGREARDRDEPEYGGEYGRKRSK 221
+++ +SE+ + +D RY A+ D E + +++K
Sbjct: 238 QNEEKSETSKSLEEEKFDPNERYLHLAAKLLDAKEQAAAFKLEKNK 283
>DICTYBASE|DDB_G0267516 [details] [associations]
symbol:dhx57 "RWD domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908
PROSITE:PS51194 SMART:SM00490 SMART:SM00591 SMART:SM00847
dictyBase:DDB_G0267516 GO:GO:0005524 GenomeReviews:CM000150_GR
EMBL:AAFI02000003 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K13026
RefSeq:XP_647095.1 ProteinModelPortal:Q55GT9
EnsemblProtists:DDB0235268 GeneID:8615899 KEGG:ddi:DDB_G0267516
OMA:EVHERST Uniprot:Q55GT9
Length = 1451
Score = 381 (139.2 bits), Expect = 9.2e-63, Sum P(3) = 9.2e-63
Identities = 90/228 (39%), Positives = 135/228 (59%)
Query: 554 REDAKFSQHMKKGEAVSDFAKSKTLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSG 613
+E K ++ +K E K + ++R+ LP+F + E L+ ++ENQ ETG G
Sbjct: 595 KEKLKINKELKN-EYDRLIKVDKGVIKKRESLPVFKRKKEFLKCLQENQVVVITAETGCG 653
Query: 614 KTTQLTQYLLED------GYTTNGIVGCTQPRRVAAMSVAKRVSEE-----MDTELGDKV 662
K+TQ+ QY+LE G N IV CTQPRR++A+ VA+RVS E ++ +G V
Sbjct: 654 KSTQIPQYILESFISQEKGSECN-IV-CTQPRRISAIGVAERVSYEWNCGTVENSIGGLV 711
Query: 663 GYAIRFEDVTGPSTLIKYMTDGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLFGILK 722
GY IR E ST + + T G+LLR L S++ I++DE HERS D L IL+
Sbjct: 712 GYQIRNESKRSQSTRLLFCTTGILLRRILDVSNISDLSHIIIDEVHERSTDNDFLLIILR 771
Query: 723 KVVARRRDFKLIVTSATLNAQKFSDFFGSVP--IFHIPGRTFPVNTLY 768
+++++R+D K+I+ SATLNA++ +++F IF IPG TFPV +Y
Sbjct: 772 EIISKRKDLKIILMSATLNAKQIANYFKCTDDSIFSIPGFTFPVKNIY 819
Score = 347 (127.2 bits), Expect = 9.2e-63, Sum P(3) = 9.2e-63
Identities = 101/355 (28%), Positives = 168/355 (47%)
Query: 775 DYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELL-I 833
D VE+ + + + IL+F+ G +I C R+ + IS+ T + + +
Sbjct: 880 DVVESLILHLVN-GVLKKDKSILVFVPGLSDILELC----SRLGKPISTFTEAICQRIWC 934
Query: 834 LPIYSQL-PADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPK 892
+P++S L P D Q K+FEKA G K ++ATNIAETS+T++ + V+D G +N
Sbjct: 935 VPLHSSLSPKD-QQKVFEKAPNGRVKVVIATNIAETSITIEDVEIVVDCGRVNQMTFNSI 993
Query: 893 MGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNV 952
G + S C++++T+S +++ PEI RT+L +
Sbjct: 994 TGNSVMSEEWTSKASCRQRAGRAGRTSSGLCFKVFTKSME-SQLQDQDTPEILRTSLQQL 1052
Query: 953 VXXXXXXXXXXXXXF--DFM----DPPPQENILNSMYQLWVLGALN----NVGALTDLGW 1002
DF+ +PP E I +S+ +L + AL LT LG+
Sbjct: 1053 CLHVKLFLKNNKNTTIQDFLNRAIEPPSSEQIQSSINELISIDALKINQQQQQELTPLGY 1112
Query: 1003 KMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAAREKFFV- 1061
+ P+D + KMLL G CLD +LTI + L+ S F P D+ +KF
Sbjct: 1113 HLASLPVDVYIGKMLLFGCIFRCLDPILTIAATLNYKSPFLNPPDKTIRP---MDKFSSP 1169
Query: 1062 QESDHLTLLYVYQQWKEHQYRGD---WCEEHYLHVKSLRKAREVRSQLLDILKTL 1113
+SDH TL+ Y W++ G+ +C E+YL + +LR ++++ Q ++IL +
Sbjct: 1170 NQSDHQTLINAYNSWRKSIQDGNEYQFCRENYLSIPTLRTIQDLKLQFVEILSEI 1224
Score = 64 (27.6 bits), Expect = 9.2e-63, Sum P(3) = 9.2e-63
Identities = 29/131 (22%), Positives = 58/131 (44%)
Query: 1074 QQWKEHQYRGDWCEEH--YLHVKSLRKAREVRSQLLDIL--KTLKIPLTSSGHDFDVVRK 1129
QQ K + Y D +E Y++ + K++ + S L + K +I + +
Sbjct: 1243 QQQKGNNYSNDCIDEFVGYIYNSNSSKSKIITSVLCAGMYPKIARIDYPDAKYS-QTASG 1301
Query: 1130 AICSAYFHNAARLKGVGEYINCRNGMPCH---LHPSSAIYGLG-YTPEYVVYHELILTTK 1185
AI + Y + L + + NC G P +HP S + G + +++Y++ + T+K
Sbjct: 1302 AIKNKYSPESLLL--LTKPPNCGPGKPLERVFIHPRSTNFKEGEWVYPFIIYNDKVKTSK 1359
Query: 1186 EYMQCATAVEP 1196
++ T + P
Sbjct: 1360 LFLHHITNLSP 1370
>FB|FBgn0052533 [details] [associations]
symbol:CG32533 species:7227 "Drosophila melanogaster"
[GO:0004386 "helicase activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:AE014298 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
OMA:DSDQVFH GeneTree:ENSGT00700000104421 EMBL:AY058623
RefSeq:NP_728244.1 UniGene:Dm.4145 SMR:Q9VWI5
EnsemblMetazoa:FBtr0074786 GeneID:32933 KEGG:dme:Dmel_CG32533
UCSC:CG32533-RA FlyBase:FBgn0052533 InParanoid:Q9VWI5
OrthoDB:EOG4V9S5G GenomeRNAi:32933 NextBio:781096 Uniprot:Q9VWI5
Length = 1139
Score = 670 (240.9 bits), Expect = 1.5e-62, P = 1.5e-62
Identities = 189/612 (30%), Positives = 305/612 (49%)
Query: 532 KKTAEQVDADTAV--VGEQGEIDFREDAKFSQHMKKGEAVSDFAKSKTLAEQRQYLPIFS 589
K A ++DAD + +Q + FR ++ E F + + L + ++ LPI
Sbjct: 94 KHLALRLDADELLQEARDQMQSQFRHILLVYLDFRQTEK---FQRIRKLRQTQRNLPIAR 150
Query: 590 VRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNGIVGCTQPRRVAAMSVAKR 649
R +L + + ++ G+TG GK+TQ+ QYL + GY + + CTQPRR+A +S+ KR
Sbjct: 151 FRKDLREALDTSRVVIVAGDTGCGKSTQVPQYLYDFGYRS---IACTQPRRLACVSLCKR 207
Query: 650 VSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDSDLDKYRVIVMDEAHE 709
V+ E+ + G +V + IRFE T I ++T+G+LLR+ ++LD+Y +++DE HE
Sbjct: 208 VAHELLDDYGSRVAFQIRFERSRTKLTNILFITEGLLLRQLAVAANLDQYDALILDEIHE 267
Query: 710 RSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGS--VPIFHIPGRTFPVNTL 767
R+L D L G+ K ++ R KLI+ SAT+N + F +FG + +PGR FP+
Sbjct: 268 RNLFGDFLLGVTKCLLRARPQLKLILMSATINVELFHGYFGEEGARLVQVPGRLFPIKLR 327
Query: 768 YSKTPCEDYV--EAAVKQAMTIHITSPPG-DILIFMTGQ----DEIEAACFALK-ERMEQ 819
Y P + +A K++ I P +L + Q + + F +E
Sbjct: 328 YLPPPALELKAGQATSKRSQRNRIDPAPFVQVLSLIDQQYPTSERGDVLIFVSGVNEIES 387
Query: 820 LISST---TREVPELLILPIYS-QLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGI 875
++ + E L+LP++S Q AD Q+K+F+ A EG RKCIV+TNIAETSLTVDG+
Sbjct: 388 VVEAVHEYATEQTHWLVLPLHSGQAIAD-QSKVFDYAPEGMRKCIVSTNIAETSLTVDGV 446
Query: 876 FYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNE 935
+V+D+G K ++ L+ F VS C+RLYT Y N
Sbjct: 447 RFVVDSGKVKEMNFDATCKGQRLKEFWVSKSSADQRKGRAGRTGPGVCFRLYTAEQY-NA 505
Query: 936 MLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNVG 995
P PEI R L ++ F F++ P E I ++ L AL+
Sbjct: 506 FEAYPTPEIYRVPLDTMLLQMVSMGLPDVRAFPFIEAPETERIEQTILALKQHCALSVEE 565
Query: 996 ALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAE-ESDA 1054
+T LG + P++ + KMLLMG ++++LT+ +MLSV + +RA +
Sbjct: 566 KITPLGRSLANLPVELSIGKMLLMGSVFPEVEQLLTLAAMLSVQNPL---TNRAHTDQRC 622
Query: 1055 AREKFFVQESDH---LTLLYVYQQWKEHQYRGD----WCEEHYLHVKSLRKAREVRSQLL 1107
RE+ + ESDH TL+ +Y W + + R D WC + + + ++R Q
Sbjct: 623 VRERESL-ESDHGDLFTLVRLYNVWVQLKMRRDGTRQWCRRLGIEEQRFYEVTKLRQQFQ 681
Query: 1108 DILKTLKIPLTS 1119
IL++ + + S
Sbjct: 682 RILESCGMVVAS 693
>UNIPROTKB|E2RID8 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:54505
GeneTree:ENSGT00550000074257 EMBL:AAEX03001437 RefSeq:XP_535238.2
Ensembl:ENSCAFT00000010821 GeneID:478060 KEGG:cfa:478060
NextBio:20853441 Uniprot:E2RID8
Length = 1367
Score = 381 (139.2 bits), Expect = 2.4e-62, Sum P(4) = 2.4e-62
Identities = 87/216 (40%), Positives = 130/216 (60%)
Query: 574 KSKTLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLED------GY 627
K + L ++RQ LP+F R+ +++ ++ ++ GETGSGK+TQ+ +LLED G
Sbjct: 558 KYQRLLKERQQLPVFKHRNSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNEWGT 617
Query: 628 TTNGIVGCTQPRRVAAMSVAKRVSEEMDTELG-----DKVGYAIRFEDVTGPSTLIKYMT 682
+ IV CTQPRR++A+S+A RV +E+ E G GY IR E ST + Y T
Sbjct: 618 SKCNIV-CTQPRRISAVSLATRVCDELGCENGPGGRNSLCGYQIRMESRASESTRLLYCT 676
Query: 683 DGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNA 742
GVLLR+ +D L +++DE HERS+ +D L ILK+++ +R D LI+ SAT+++
Sbjct: 677 TGVLLRKLQEDGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSATVDS 736
Query: 743 QKFSDFFGSVPIFHIPGRTFPVNTLYSKTPCEDYVE 778
+KFS +F PI I GR++PV + ED VE
Sbjct: 737 EKFSTYFTHCPILRISGRSYPVEVFH----LEDIVE 768
Score = 361 (132.1 bits), Expect = 2.4e-62, Sum P(4) = 2.4e-62
Identities = 108/362 (29%), Positives = 169/362 (46%)
Query: 794 GDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELL-ILPIYSQLPADLQAKIFEKA 852
G +LIF+ G I+ ++ L+S+ R E ++ ++S L QA F
Sbjct: 865 GAVLIFLPGLAHIQ--------QLYDLLSTDRRFFSERYKVIALHSILSTQDQAAAFTLP 916
Query: 853 KEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXX 912
G RK ++ATNIAET +T+ + +VIDTG K Y+ M +L VS
Sbjct: 917 PPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQ 976
Query: 913 XXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXF--DFM 970
C+R+YT + M S VPEI R L + F +
Sbjct: 977 GRAGRVRDGFCFRMYTRERFEGFMDYS-VPEILRVPLEELCLHIMKCNLGSPEDFLSKAL 1035
Query: 971 DPPPQENILNSMYQLWVLGALN-NVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEV 1029
DPP + I N+M L +GA N LT LG + P++ + KML+ G GCLD V
Sbjct: 1036 DPPQLQVISNAMNLLRKIGACELNEPTLTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPV 1095
Query: 1030 LTIVSMLSVPSVFFRPKDRAEESDAAREKFFVQESDHLTLLYVYQQWK----EHQYRGD- 1084
T+ ++++ S F P R +E+D A+ + +SDHLT+ Y WK E YR +
Sbjct: 1096 ATLAAVMTEKSPFTTPIGRKDEADLAKSALAMADSDHLTIYNAYLGWKKARQEGGYRSEI 1155
Query: 1085 -WCEEHYLHVKSLRKAREVRSQLLDILKTLKIPLTSSGHDFDVVRKAICSAYFHNAARLK 1143
+C ++L+ SL +V+ +L+ ++K +++ +D++ R A + F A LK
Sbjct: 1156 AYCRRNFLNRTSLLTLEDVKQELMKLVKAAGFSSSTTSNDWEENR-ASQTLPFQEIALLK 1214
Query: 1144 GV 1145
V
Sbjct: 1215 AV 1216
Score = 49 (22.3 bits), Expect = 2.4e-62, Sum P(4) = 2.4e-62
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 1159 LHPSSAIYGLGYTPEYVVYHELILTTKEYMQCATAVEP 1196
+HPSS L T +++Y E + T+ Y++ T + P
Sbjct: 1253 VHPSSVNRDL-QTYGWLLYQEKVRYTRVYLRETTLITP 1289
Score = 44 (20.5 bits), Expect = 2.4e-62, Sum P(4) = 2.4e-62
Identities = 10/33 (30%), Positives = 14/33 (42%)
Query: 248 EGYSNSSKRYQPSPSPMFVGASPDARLVSPLST 280
EG+S + QP P F A + PL +
Sbjct: 171 EGFSQEFEEQQPKSRPKFQSPQIPATVSPPLQS 203
Score = 37 (18.1 bits), Expect = 1.3e-61, Sum P(4) = 1.3e-61
Identities = 11/40 (27%), Positives = 20/40 (50%)
Query: 80 DEEEKSESS-GIDEVVSNATNGKRSHASRRYRETSARDIT 118
+EEEKSE+S ++E N + H + + + + T
Sbjct: 238 NEEEKSENSKSLEEEEKFDPNERYLHLAAKLLDAKEQAAT 277
>UNIPROTKB|J9P6V4 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 OMA:WLLYQEK
GeneTree:ENSGT00550000074257 EMBL:AAEX03001437
Ensembl:ENSCAFT00000043416 Uniprot:J9P6V4
Length = 1369
Score = 381 (139.2 bits), Expect = 2.4e-62, Sum P(4) = 2.4e-62
Identities = 87/216 (40%), Positives = 130/216 (60%)
Query: 574 KSKTLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLED------GY 627
K + L ++RQ LP+F R+ +++ ++ ++ GETGSGK+TQ+ +LLED G
Sbjct: 558 KYQRLLKERQQLPVFKHRNSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNEWGT 617
Query: 628 TTNGIVGCTQPRRVAAMSVAKRVSEEMDTELG-----DKVGYAIRFEDVTGPSTLIKYMT 682
+ IV CTQPRR++A+S+A RV +E+ E G GY IR E ST + Y T
Sbjct: 618 SKCNIV-CTQPRRISAVSLATRVCDELGCENGPGGRNSLCGYQIRMESRASESTRLLYCT 676
Query: 683 DGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNA 742
GVLLR+ +D L +++DE HERS+ +D L ILK+++ +R D LI+ SAT+++
Sbjct: 677 TGVLLRKLQEDGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSATVDS 736
Query: 743 QKFSDFFGSVPIFHIPGRTFPVNTLYSKTPCEDYVE 778
+KFS +F PI I GR++PV + ED VE
Sbjct: 737 EKFSTYFTHCPILRISGRSYPVEVFH----LEDIVE 768
Score = 361 (132.1 bits), Expect = 2.4e-62, Sum P(4) = 2.4e-62
Identities = 108/362 (29%), Positives = 169/362 (46%)
Query: 794 GDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELL-ILPIYSQLPADLQAKIFEKA 852
G +LIF+ G I+ ++ L+S+ R E ++ ++S L QA F
Sbjct: 868 GAVLIFLPGLAHIQ--------QLYDLLSTDRRFFSERYKVIALHSILSTQDQAAAFTLP 919
Query: 853 KEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXX 912
G RK ++ATNIAET +T+ + +VIDTG K Y+ M +L VS
Sbjct: 920 PPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQ 979
Query: 913 XXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXF--DFM 970
C+R+YT + M S VPEI R L + F +
Sbjct: 980 GRAGRVRDGFCFRMYTRERFEGFMDYS-VPEILRVPLEELCLHIMKCNLGSPEDFLSKAL 1038
Query: 971 DPPPQENILNSMYQLWVLGALN-NVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEV 1029
DPP + I N+M L +GA N LT LG + P++ + KML+ G GCLD V
Sbjct: 1039 DPPQLQVISNAMNLLRKIGACELNEPTLTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPV 1098
Query: 1030 LTIVSMLSVPSVFFRPKDRAEESDAAREKFFVQESDHLTLLYVYQQWK----EHQYRGD- 1084
T+ ++++ S F P R +E+D A+ + +SDHLT+ Y WK E YR +
Sbjct: 1099 ATLAAVMTEKSPFTTPIGRKDEADLAKSALAMADSDHLTIYNAYLGWKKARQEGGYRSEI 1158
Query: 1085 -WCEEHYLHVKSLRKAREVRSQLLDILKTLKIPLTSSGHDFDVVRKAICSAYFHNAARLK 1143
+C ++L+ SL +V+ +L+ ++K +++ +D++ R A + F A LK
Sbjct: 1159 AYCRRNFLNRTSLLTLEDVKQELMKLVKAAGFSSSTTSNDWEENR-ASQTLPFQEIALLK 1217
Query: 1144 GV 1145
V
Sbjct: 1218 AV 1219
Score = 49 (22.3 bits), Expect = 2.4e-62, Sum P(4) = 2.4e-62
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 1159 LHPSSAIYGLGYTPEYVVYHELILTTKEYMQCATAVEP 1196
+HPSS L T +++Y E + T+ Y++ T + P
Sbjct: 1256 VHPSSVNRDL-QTYGWLLYQEKVRYTRVYLRETTLITP 1292
Score = 44 (20.5 bits), Expect = 2.4e-62, Sum P(4) = 2.4e-62
Identities = 10/33 (30%), Positives = 14/33 (42%)
Query: 248 EGYSNSSKRYQPSPSPMFVGASPDARLVSPLST 280
EG+S + QP P F A + PL +
Sbjct: 171 EGFSQEFEEQQPKSRPKFQSPQIPATVSPPLQS 203
>UNIPROTKB|E2QTL7 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
Ensembl:ENSCAFT00000013769 Uniprot:E2QTL7
Length = 988
Score = 399 (145.5 bits), Expect = 2.7e-62, Sum P(3) = 2.7e-62
Identities = 92/235 (39%), Positives = 141/235 (60%)
Query: 538 VDADTAVVGEQGEIDFREDAKFSQHMKKGEAVSDFAKSKTLAEQRQYLPIFSVRDELLQV 597
+D D+ + ++ E D D + + ++K + SD + + R+ LP + ++ EL+ +
Sbjct: 157 IDRDSEYLLQENEPDVALDQQLLEDLRKKK--SDLRYIE-MQHFREKLPSYGMQKELVNM 213
Query: 598 IRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNGI-----VGCTQPRRVAAMSVAKRVSE 652
I +Q GETG GKTTQ+TQ++L+D Y G + CTQPRR++A+SVA+RV+
Sbjct: 214 IDNHQVTVISGETGCGKTTQVTQFILDD-YIERGKGSACRIVCTQPRRISAISVAERVAA 272
Query: 653 EMDTELGD--KVGYAIRFED-VTGPSTLIKYMTDGVLLRETLKDSDLDKYRVIVMDEAHE 709
E G+ GY IR + + I Y T G++L+ DS L IV+DE HE
Sbjct: 273 ERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSDSHLSSVSHIVLDEIHE 332
Query: 710 RSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPIFHIPGRTFPV 764
R+L +DVL ++K ++ R D K+I+ SATLNA+KFS++FG+ P+ HIPG TFPV
Sbjct: 333 RNLQSDVLMTVIKDLLNFRPDLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPV 387
Score = 336 (123.3 bits), Expect = 2.7e-62, Sum P(3) = 2.7e-62
Identities = 94/321 (29%), Positives = 153/321 (47%)
Query: 842 ADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVF 901
+D ++F+K G RK ++ATNIAETS+T+D + YVID G K ++ + + +
Sbjct: 510 SDTIGQVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAE 569
Query: 902 PVSXXXXXXXXXXXXXXXXXXCYRLYT--ESAYLNEMLPSPVPEIQRTNLGNVVXXXXXX 959
VS CY LY ++ L++ +PEI RT L +
Sbjct: 570 WVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDY---QLPEILRTPLEELCLQIKIL 626
Query: 960 XXXXXXXF--DFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKML 1017
F MDPP E + S+ L L AL+ LT LG + P++P + KM+
Sbjct: 627 RLGGIAYFLSRLMDPPSDEAVSLSIKHLMELNALDKQEELTPLGVHLARLPVEPHIGKMI 686
Query: 1018 LMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAAREKFFVQ-ESDHLTLLYVYQQW 1076
L G CLD VLTI + LS F P + + +DA R++ +SDHLT++ ++ W
Sbjct: 687 LFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKIADARRKELAKDTKSDHLTVVNAFEGW 746
Query: 1077 KEHQYRG-----DWCEEHYLHVKSLRKAREVRSQLLDIL--------KTLKIPLTSSGHD 1123
+E + RG D+C E++L +L+ ++ Q + L + K P ++ D
Sbjct: 747 EEARRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPKDPKSNINSD 806
Query: 1124 FDVVRKA-ICSAYFHNAARLK 1143
+ + KA IC+ + A+++
Sbjct: 807 NEKIIKAVICAGLYPKVAKIR 827
Score = 79 (32.9 bits), Expect = 1.8e-35, Sum P(3) = 1.8e-35
Identities = 32/150 (21%), Positives = 65/150 (43%)
Query: 1080 QYRGDWCEEHYLHVKSLRKAREVRSQLLDIL--------KTLKIPLTSSGHDFDVVRKA- 1130
+Y D+C E++L +L+ ++ Q + L + K P ++ D + + KA
Sbjct: 755 RYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPKDPKSNINSDNEKIIKAV 814
Query: 1131 ICSAYFHNAARLK-GVGEY-----INCRNGMPCHLHPSSA-IYGLGYTPEYVVYHELILT 1183
IC+ + A+++ +G+ + + +HP S + + +++YH + T
Sbjct: 815 ICAGLYPKVAKIRLNLGKKRKMVKVYTKTDGLVAIHPKSVNVEQTEFHYNWLIYHLKMRT 874
Query: 1184 TKEYMQCATAVEPQWLSELGPMFFSVKDSD 1213
+ Y+ T V P L G KD+D
Sbjct: 875 SSIYLYDCTEVSPYCLLFFGGDISIQKDND 904
Score = 47 (21.6 bits), Expect = 3.0e-25, Sum P(3) = 3.0e-25
Identities = 13/41 (31%), Positives = 19/41 (46%)
Query: 385 GDDASYQKKEVELAKRLVRKDGSRMSLAQSKKLSQITADNH 425
G+ YQ + L RL RK GS + L + +D+H
Sbjct: 281 GNSTGYQ---IRLQSRLPRKQGSILYCTTGIILQWLQSDSH 318
Score = 43 (20.2 bits), Expect = 2.7e-62, Sum P(3) = 2.7e-62
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 774 EDYVEAAVKQAMTIHIT--SPPGDILIFMTGQDEI 806
+D V+ + A+ HI G IL+F+ G D I
Sbjct: 461 DDKVDLNLIAALIRHIVLEEEDGAILVFLPGWDNI 495
>ZFIN|ZDB-GENE-050419-20 [details] [associations]
symbol:si:dkey-119o24.1 "si:dkey-119o24.1"
species:7955 "Danio rerio" [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-050419-20 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000247063 GeneTree:ENSGT00550000074257
HOVERGEN:HBG081438 KO:K14442 OrthoDB:EOG4K6G3J OMA:GRIAYND
EMBL:BX908763 EMBL:BX927166 IPI:IPI00633899 RefSeq:NP_001122016.1
UniGene:Dr.130296 Ensembl:ENSDART00000109467 GeneID:569072
KEGG:dre:569072 InParanoid:A3KQN8 NextBio:20889491 Uniprot:A3KQN8
Length = 1037
Score = 379 (138.5 bits), Expect = 3.2e-62, Sum P(4) = 3.2e-62
Identities = 91/226 (40%), Positives = 136/226 (60%)
Query: 561 QHMKKGEAVS-DFAKSKTLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLT 619
+ +KK + D A + + R+ LP + +R+EL+++I N+ GETG GKTTQ+T
Sbjct: 195 EELKKDQQKKEDNAAYIEMLKFRKKLPSYGMREELVRLISANRVLVISGETGCGKTTQVT 254
Query: 620 QYLLED----GYTTNGIVGCTQPRRVAAMSVAKRVSEEMDTELGD--KVGYAIRFED-VT 672
Q++L+D G + V CTQPRR++A+SVA+RV+ E +G+ GY IR + +
Sbjct: 255 QFILDDFIQRGQGSLCRVVCTQPRRISAISVAERVAVERAEPVGEGKSCGYQIRLQSRLP 314
Query: 673 GPSTLIKYMTDGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFK 732
+ Y T GV+L+ D L +V+DE HERS+ +D+L I+K ++ R D K
Sbjct: 315 RKQGSLLYCTTGVILQWLHSDPYLSSITHLVLDEIHERSVQSDILITIVKDLLTARDDLK 374
Query: 733 LIVTSATLNAQKFSDFFGSVPIFHIPGRTFPVNTLYSKTPCEDYVE 778
+++ SATLNA+KFS +F + P+ HIPG TFPV T Y ED VE
Sbjct: 375 VVLMSATLNAEKFSKYFNNCPMIHIPGYTFPV-TEYL---LEDVVE 416
Score = 351 (128.6 bits), Expect = 3.2e-62, Sum P(4) = 3.2e-62
Identities = 104/356 (29%), Positives = 168/356 (47%)
Query: 774 EDYVEAAVKQAMTIHIT--SPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPEL 831
+D ++ + A+ HI G IL+F+ G D I L +Q+ S
Sbjct: 481 DDNIDLELTAALIRHIAVNENEGAILVFLPGWDNISTLNDLLMS--DQMFKSGRYR---F 535
Query: 832 LILPIYSQLPADLQAKI-------FEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYG 884
+I+P++S +P Q ++ F+K G RK ++ATNIAETS+T+D + YVID G
Sbjct: 536 IIIPLHSLMPTVSQTQVISLFPQVFKKPPPGVRKIVIATNIAETSITIDDVVYVIDGGKI 595
Query: 885 KMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPS-PVPE 943
K ++ + + + VS CY LY + +L + +PE
Sbjct: 596 KETHFDTQNNIRTMTAEWVSIANAKQRKGRAGRVSPGKCYHLY--NGLRASLLDNYQLPE 653
Query: 944 IQRTNLGNVVXXXXXXXXXXXXXF--DFMDPPPQENILNSMYQLWVLGALNNVGALTDLG 1001
IQRT L + F MDPP I ++ L L AL+ LT LG
Sbjct: 654 IQRTPLEELCLQIKVLKLGPIATFLQKTMDPPSDRAIELAITHLVDLNALDRDEKLTPLG 713
Query: 1002 WKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAAREKFFV 1061
+ + P++P + KM+L G LGCLD VLTI + LS FF P + + +D R K F
Sbjct: 714 FHLARMPVEPHIGKMILFGALLGCLDPVLTIAASLSFKDPFFIPLGKEKIADQ-RRKMFS 772
Query: 1062 QES--DHLTLLYVYQQWKEHQYRG-----DWCEEHYLHVKSLRKAREVRSQLLDIL 1110
Q S DHL+++ + W++ + +G ++C +++L +L+ + ++ Q + L
Sbjct: 773 QNSRSDHLSIVNAFLGWEDAKRQGSRFEREYCWDNFLSANTLQMLQNMKGQFAEHL 828
Score = 58 (25.5 bits), Expect = 3.2e-62, Sum P(4) = 3.2e-62
Identities = 22/78 (28%), Positives = 32/78 (41%)
Query: 1137 HNAARLKGVGEYINCRNGMPCHLHPSSA-IYGLGYTPEYVVYHELILTTKEYMQCATAVE 1195
HN R V Y +G C +HP S + +++VYH + TT ++ T V
Sbjct: 873 HNKKRPMPVKVYTKA-DGKVC-IHPKSVNAEETQFQYKWLVYHLKMKTTSIFLYDCTEVS 930
Query: 1196 PQWLSELGPMFFSVKDSD 1213
P L G +D D
Sbjct: 931 PFSLLFFGGNISIQRDQD 948
Score = 38 (18.4 bits), Expect = 3.2e-62, Sum P(4) = 3.2e-62
Identities = 8/24 (33%), Positives = 12/24 (50%)
Query: 186 PSRRDNYDSKGRYRGREARDRDEP 209
PS ++ +K RG D D+P
Sbjct: 119 PSTSQSWRNKDEARGHSYFDGDDP 142
Score = 37 (18.1 bits), Expect = 1.1e-26, Sum P(4) = 1.1e-26
Identities = 10/23 (43%), Positives = 11/23 (47%)
Query: 385 GDDASYQKKEVELAKRLVRKDGS 407
G YQ + L RL RK GS
Sbjct: 300 GKSCGYQ---IRLQSRLPRKQGS 319
>UNIPROTKB|J9PAM3 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 GO:GO:0008026
EMBL:AAEX03007702 Ensembl:ENSCAFT00000046695 Uniprot:J9PAM3
Length = 1000
Score = 399 (145.5 bits), Expect = 9.1e-62, Sum P(2) = 9.1e-62
Identities = 87/224 (38%), Positives = 135/224 (60%)
Query: 550 EIDFREDAKFSQHMKKGEAVSDFAKSKTLAEQ-RQYLPIFSVRDELLQVIRENQXXXXXG 608
E + RE +K S + G + ++ + RQ LP+F ++E++++I+EN+ G
Sbjct: 156 EAENREMSKTSGRLNNGIPQIPVKRGESEFDSFRQSLPVFEKQEEIVKIIKENKVVLIVG 215
Query: 609 ETGSGKTTQLTQYLLEDGYTTNGI---VGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYA 665
ETGSGKTTQ+ Q+LL+D + NGI + CTQPRR+AA++VA+RV+ E +G +GY
Sbjct: 216 ETGSGKTTQIPQFLLDDCFK-NGIPCRIFCTQPRRLAAIAVAERVAAERRERIGQTIGYQ 274
Query: 666 IRFEDVTGPSTLIKYMTDGVLLRETLK-DSDLDKYRVIVMDEAHERSLSTDVLFGILKKV 724
IR E P TL+ + T+GVLLR + DS L +++DE HER +D L L+ +
Sbjct: 275 IRLESRVSPKTLLTFCTNGVLLRTLMAGDSTLSTVTHVIVDEVHERDRFSDFLLTKLRDL 334
Query: 725 VARRRDFKLIVTSATLNAQKFSDFFGSVPIFHIPGRTFPVNTLY 768
+ + KLI++SA L+ F +FGS P+ +I GR F V ++
Sbjct: 335 LQKHPTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFEVKEMF 378
Score = 325 (119.5 bits), Expect = 9.1e-62, Sum P(2) = 9.1e-62
Identities = 98/348 (28%), Positives = 165/348 (47%)
Query: 794 GDILIFMTGQDEIEAACFALKERM---EQLISSTTREVPELLILPIYSQLPADLQAKIFE 850
G ILIF+ G DEI L++R+ ++ + T + ++S + Q K+ +
Sbjct: 622 GAILIFLPGYDEI----VGLRDRILFDDKRFADNTHRYQ---VFMLHSNMQTSDQKKVLK 674
Query: 851 KAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXX 910
G RK I++TNIAETS+TV+ + +VID+G K K ++ + L++ +S
Sbjct: 675 NPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAVQ 734
Query: 911 XXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFM 970
C+RL++ + N ML PE+ R L + DF+
Sbjct: 735 RKGRAGRCRPGICFRLFSRLRFQN-MLEFQTPELLRMPLQELCLHTKLLAPVNCPIADFL 793
Query: 971 ----DPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCL 1026
+PPP + N++ L + A++ LT+LG+ + + P++P L KM+L L CL
Sbjct: 794 MKAPEPPPALIVRNAVQMLKTIDAMDAWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCL 853
Query: 1027 DEVLTIVSMLSVPSVFFRPKDRAEESDA--AREKFFVQE-SDHLTLLYVYQQWKEHQYRG 1083
D +LTI L+ F P +++ A R++F SDH+ LL +Q W++ + G
Sbjct: 854 DPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRFTAGTFSDHMALLRAFQAWQKARSDG 913
Query: 1084 DW----CEEHYLHVKSLRKAREVRSQLLDILKTLKIPLTSSGHDF-DV 1126
W CE+++L ++ +R+QLL L+ G D DV
Sbjct: 914 -WERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRARGGGDIRDV 960
Score = 38 (18.4 bits), Expect = 1.4e-23, Sum P(2) = 1.4e-23
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 340 TYSEEHNYEITESMRLEMEYNSDRAWYDREEGT 372
T E Y+ E R E + ++ WY +E T
Sbjct: 389 TNKEMLKYK-KEKQREEKQQSTLTEWYSAQENT 420
>UNIPROTKB|F5GZS0 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0003676
EMBL:AC018452 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AC134026
HGNC:HGNC:14410 IPI:IPI00922725 ProteinModelPortal:F5GZS0
SMR:F5GZS0 PRIDE:F5GZS0 Ensembl:ENST00000544526 ArrayExpress:F5GZS0
Bgee:F5GZS0 Uniprot:F5GZS0
Length = 994
Score = 388 (141.6 bits), Expect = 1.3e-61, Sum P(2) = 1.3e-61
Identities = 91/235 (38%), Positives = 139/235 (59%)
Query: 538 VDADTAVVGEQGEIDFREDAKFSQHMKKGEAVSDFAKSKTLAEQRQYLPIFSVRDELLQV 597
+D D+ + ++ E D D K + ++K + +D + + R+ LP + ++ EL+ +
Sbjct: 163 IDRDSEYLLQENEPDGTLDQKLLEDLQKKK--NDLRYIE-MQHFREKLPSYGMQKELVNL 219
Query: 598 IRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNGI-----VGCTQPRRVAAMSVAKRVSE 652
I +Q GETG GKTTQ+TQ++L D Y G + CTQPRR++A+SVA+RV+
Sbjct: 220 IDNHQVTVISGETGCGKTTQVTQFIL-DNYIERGKGSACRIVCTQPRRISAISVAERVAA 278
Query: 653 EMDTELG--DKVGYAIRFED-VTGPSTLIKYMTDGVLLRETLKDSDLDKYRVIVMDEAHE 709
E G + GY IR + + I Y T G++L+ D L IV+DE HE
Sbjct: 279 ERAESCGSGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSDPYLSSVSHIVLDEIHE 338
Query: 710 RSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPIFHIPGRTFPV 764
R+L +DVL ++K ++ R D K+I+ SATLNA+KFS++FG+ P+ HIPG TFPV
Sbjct: 339 RNLQSDVLMTVVKDLLNFRSDLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPV 393
Score = 335 (123.0 bits), Expect = 1.3e-61, Sum P(2) = 1.3e-61
Identities = 93/317 (29%), Positives = 152/317 (47%)
Query: 846 AKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSX 905
+++F++ G RK ++ATNIAETS+T+D + YVID G K ++ + + + VS
Sbjct: 520 SQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSK 579
Query: 906 XXXXXXXXXXXXXXXXXCYRLYT--ESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXX 963
CY LY ++ L++ +PEI RT L +
Sbjct: 580 ANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDY---QLPEILRTPLEELCLQIKILRLGG 636
Query: 964 XXXF--DFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGE 1021
F MDPP E +L S+ L L AL+ LT LG + P++P + KM+L G
Sbjct: 637 IAYFLSRLMDPPSNEAVLLSIRHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGA 696
Query: 1022 QLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAAREKFFVQ-ESDHLTLLYVYQQWKEHQ 1080
CLD VLTI + LS F P + + +DA R++ SDHLT++ ++ W+E +
Sbjct: 697 LFCCLDPVLTIAASLSFKDPFVIPLGKEKIADARRKELAKDTRSDHLTVVNAFEGWEEAR 756
Query: 1081 YRG-----DWCEEHYLHVKSLRKAREVRSQLLDIL--------KTLKIPLTSSGHDFDVV 1127
RG D+C E++L +L+ ++ Q + L + K P ++ D + +
Sbjct: 757 RRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPKDPESNINSDNEKI 816
Query: 1128 RKA-ICSAYFHNAARLK 1143
KA IC+ + A+++
Sbjct: 817 IKAVICAGLYPKVAKIR 833
Score = 78 (32.5 bits), Expect = 1.3e-34, Sum P(2) = 1.3e-34
Identities = 32/150 (21%), Positives = 65/150 (43%)
Query: 1080 QYRGDWCEEHYLHVKSLRKAREVRSQLLDIL--------KTLKIPLTSSGHDFDVVRKA- 1130
+Y D+C E++L +L+ ++ Q + L + K P ++ D + + KA
Sbjct: 761 RYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPKDPESNINSDNEKIIKAV 820
Query: 1131 ICSAYFHNAARLK-GVGEY-----INCRNGMPCHLHPSSA-IYGLGYTPEYVVYHELILT 1183
IC+ + A+++ +G+ + + +HP S + + +++YH + T
Sbjct: 821 ICAGLYPKVAKIRLNLGKKRKMVKVYTKTDGLVAVHPKSVNVEQTDFHYNWLIYHLKMRT 880
Query: 1184 TKEYMQCATAVEPQWLSELGPMFFSVKDSD 1213
+ Y+ T V P L G KD+D
Sbjct: 881 SSIYLYDCTEVSPYCLLFFGGDISIQKDND 910
Score = 39 (18.8 bits), Expect = 9.1e-25, Sum P(2) = 9.1e-25
Identities = 10/23 (43%), Positives = 12/23 (52%)
Query: 385 GDDASYQKKEVELAKRLVRKDGS 407
G+ YQ + L RL RK GS
Sbjct: 287 GNSTGYQ---IRLQSRLPRKQGS 306
>UNIPROTKB|F1MNU7 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 CTD:64848 OMA:RAFWESS EMBL:DAAA02027655
IPI:IPI00689346 RefSeq:NP_001179740.1 UniGene:Bt.24975
ProteinModelPortal:F1MNU7 Ensembl:ENSBTAT00000018745 GeneID:541024
KEGG:bta:541024 NextBio:20878969 Uniprot:F1MNU7
Length = 1429
Score = 399 (145.5 bits), Expect = 2.1e-61, Sum P(2) = 2.1e-61
Identities = 87/224 (38%), Positives = 135/224 (60%)
Query: 550 EIDFREDAKFSQHMKKGEAVSDFAKSKTLAEQ-RQYLPIFSVRDELLQVIRENQXXXXXG 608
E + RE +K S + G + ++ + RQ LP+F ++E++++I+EN+ G
Sbjct: 156 EAENREMSKTSGRLNNGIPQIPVKRGESEFDSFRQSLPVFEKQEEIVKIIKENKVVLIVG 215
Query: 609 ETGSGKTTQLTQYLLEDGYTTNGI---VGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYA 665
ETGSGKTTQ+ Q+LL+D + NGI + CTQPRR+AA++VA+RV+ E +G +GY
Sbjct: 216 ETGSGKTTQIPQFLLDDCFK-NGIPCRIFCTQPRRLAAIAVAERVAAERRERIGQTIGYQ 274
Query: 666 IRFEDVTGPSTLIKYMTDGVLLRETLK-DSDLDKYRVIVMDEAHERSLSTDVLFGILKKV 724
IR E P TL+ + T+GVLLR + DS L +++DE HER +D L L+ +
Sbjct: 275 IRLESRVSPKTLLTFCTNGVLLRTLMAGDSTLSTVTHVIVDEVHERDRFSDFLLTKLRDL 334
Query: 725 VARRRDFKLIVTSATLNAQKFSDFFGSVPIFHIPGRTFPVNTLY 768
+ + KLI++SA L+ F +FGS P+ +I GR F V ++
Sbjct: 335 LQKHPTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFEVKEMF 378
Score = 327 (120.2 bits), Expect = 2.1e-61, Sum P(2) = 2.1e-61
Identities = 97/345 (28%), Positives = 161/345 (46%)
Query: 794 GDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAK 853
G ILIF+ G DEI L++R+ + ++S + Q K+ +
Sbjct: 622 GAILIFLPGYDEI----VGLRDRILFDDKRFAENAHRYQVFMLHSNMQTSDQKKVLKNPP 677
Query: 854 EGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXX 913
G RK I++TNIAETS+TV+ + +VID+G K K ++ + L++ +S
Sbjct: 678 AGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKG 737
Query: 914 XXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFM--- 970
C+RL++ + N ML PE+ R L + DF+
Sbjct: 738 RAGRCRPGICFRLFSRLRFQN-MLEFQTPELLRMPLQELCLHTKLLAPVNCAIADFLMKA 796
Query: 971 -DPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEV 1029
+PPP + N++ L + A++ LT+LG+ + + P++P L KM+L L CLD +
Sbjct: 797 PEPPPALIVRNAVQMLKTIDAMDAWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPI 856
Query: 1030 LTIVSMLSVPSVFFRPKDRAEESDA--AREKFFVQE-SDHLTLLYVYQQWKEHQYRGDW- 1085
LTI L+ F P +++ A R++F SDH+ LL +Q W++ + G W
Sbjct: 857 LTIACTLAYRDPFVLPTQASQKRAAMLCRKRFTAGTFSDHMALLRAFQAWQKARSDG-WE 915
Query: 1086 ---CEEHYLHVKSLRKAREVRSQLLDILKTLKIPLTSSGHDF-DV 1126
CE+++L ++ +R+QLL L+ G D DV
Sbjct: 916 RAFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRARGGGDIRDV 960
>UNIPROTKB|Q9H6S0 [details] [associations]
symbol:YTHDC2 "Probable ATP-dependent RNA helicase YTHDC2"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50088 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00248 SMART:SM00490 SMART:SM00847
GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 EMBL:AC093208 EMBL:AC010389 EMBL:BC137285
EMBL:AK025593 IPI:IPI00010200 RefSeq:NP_073739.3 UniGene:Hs.231942
PDB:2YU6 PDBsum:2YU6 ProteinModelPortal:Q9H6S0 SMR:Q9H6S0
IntAct:Q9H6S0 PhosphoSite:Q9H6S0 DMDM:239938805 PaxDb:Q9H6S0
PeptideAtlas:Q9H6S0 PRIDE:Q9H6S0 Ensembl:ENST00000161863
GeneID:64848 KEGG:hsa:64848 UCSC:uc003kqn.3 CTD:64848
GeneCards:GC05P112877 HGNC:HGNC:24721 HPA:HPA037364
neXtProt:NX_Q9H6S0 PharmGKB:PA134912676 HOGENOM:HOG000155703
HOVERGEN:HBG063891 InParanoid:Q9H6S0 OMA:RAFWESS OrthoDB:EOG4JWVCN
PhylomeDB:Q9H6S0 EvolutionaryTrace:Q9H6S0 GenomeRNAi:64848
NextBio:66962 ArrayExpress:Q9H6S0 Bgee:Q9H6S0 CleanEx:HS_YTHDC2
Genevestigator:Q9H6S0 GermOnline:ENSG00000047188 Uniprot:Q9H6S0
Length = 1430
Score = 399 (145.5 bits), Expect = 2.1e-61, Sum P(2) = 2.1e-61
Identities = 87/224 (38%), Positives = 135/224 (60%)
Query: 550 EIDFREDAKFSQHMKKGEAVSDFAKSKTLAEQ-RQYLPIFSVRDELLQVIRENQXXXXXG 608
E + RE +K S + G + ++ + RQ LP+F ++E++++I+EN+ G
Sbjct: 157 EAENREMSKTSGRLNNGIPQIPVKRGESEFDSFRQSLPVFEKQEEIVKIIKENKVVLIVG 216
Query: 609 ETGSGKTTQLTQYLLEDGYTTNGI---VGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYA 665
ETGSGKTTQ+ Q+LL+D + NGI + CTQPRR+AA++VA+RV+ E +G +GY
Sbjct: 217 ETGSGKTTQIPQFLLDDCFK-NGIPCRIFCTQPRRLAAIAVAERVAAERRERIGQTIGYQ 275
Query: 666 IRFEDVTGPSTLIKYMTDGVLLRETLK-DSDLDKYRVIVMDEAHERSLSTDVLFGILKKV 724
IR E P TL+ + T+GVLLR + DS L +++DE HER +D L L+ +
Sbjct: 276 IRLESRVSPKTLLTFCTNGVLLRTLMAGDSTLSTVTHVIVDEVHERDRFSDFLLTKLRDL 335
Query: 725 VARRRDFKLIVTSATLNAQKFSDFFGSVPIFHIPGRTFPVNTLY 768
+ + KLI++SA L+ F +FGS P+ +I GR F V ++
Sbjct: 336 LQKHPTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFEVKEMF 379
Score = 327 (120.2 bits), Expect = 2.1e-61, Sum P(2) = 2.1e-61
Identities = 99/349 (28%), Positives = 166/349 (47%)
Query: 794 GDILIFMTGQDEIEAACFALKERM----EQLISSTTREVPELLILPIYSQLPADLQAKIF 849
G +LIF+ G DEI L++R+ ++ ST R + ++S + Q K+
Sbjct: 623 GAVLIFLPGYDEI----VGLRDRILFDDKRFADSTHR----YQVFMLHSNMQTSDQKKVL 674
Query: 850 EKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXX 909
+ G RK I++TNIAETS+TV+ + +VID+G K K ++ + L++ +S
Sbjct: 675 KNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAI 734
Query: 910 XXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDF 969
C+RL++ + N ML PE+ R L + DF
Sbjct: 735 QRKGRAGRCRPGICFRLFSRLRFQN-MLEFQTPELLRMPLQELCLHTKLLAPVNCPIADF 793
Query: 970 M----DPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGC 1025
+ +PPP + N++ L + A++ LT+LG+ + + P++P L KM+L L C
Sbjct: 794 LMKAPEPPPALIVRNAVQMLKTIDAMDTWEDLTELGYHLADLPVEPHLGKMVLCAVVLKC 853
Query: 1026 LDEVLTIVSMLSVPSVFFRPKDRAEESDA--AREKFFVQE-SDHLTLLYVYQQWKEHQYR 1082
LD +LTI L+ F P +++ A R++F SDH+ LL +Q W++ +
Sbjct: 854 LDPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRFTAGAFSDHMALLRAFQAWQKARSD 913
Query: 1083 GDW----CEEHYLHVKSLRKAREVRSQLLDILKTLKIPLTSSGHDF-DV 1126
G W CE+++L ++ +R+QLL L+ G D DV
Sbjct: 914 G-WERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRARGGGDIRDV 961
>MGI|MGI:2448561 [details] [associations]
symbol:Ythdc2 "YTH domain containing 2" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50088 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00248 SMART:SM00490 SMART:SM00847
MGI:MGI:2448561 GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146 PROSITE:PS50882
CTD:64848 HOGENOM:HOG000155703 OMA:RAFWESS OrthoDB:EOG4JWVCN
EMBL:BC138263 EMBL:BC171951 IPI:IPI00343249 RefSeq:NP_001156485.1
UniGene:Mm.244482 ProteinModelPortal:B2RR83 SMR:B2RR83
PhosphoSite:B2RR83 PaxDb:B2RR83 PRIDE:B2RR83
Ensembl:ENSMUST00000037763 GeneID:240255 KEGG:mmu:240255
UCSC:uc008evb.2 InParanoid:B2RR83 ChiTaRS:YTHDC2 NextBio:384522
Bgee:B2RR83 Genevestigator:B2RR83 Uniprot:B2RR83
Length = 1445
Score = 399 (145.5 bits), Expect = 2.2e-61, Sum P(2) = 2.2e-61
Identities = 87/224 (38%), Positives = 135/224 (60%)
Query: 550 EIDFREDAKFSQHMKKGEAVSDFAKSKTLAEQ-RQYLPIFSVRDELLQVIRENQXXXXXG 608
E + RE +K S + G + ++ + RQ LP+F ++E++++I+EN+ G
Sbjct: 172 EAENREMSKTSGRLNNGIPQVPVKRGESEFDSFRQSLPVFEKQEEIVKIIKENKVVLIVG 231
Query: 609 ETGSGKTTQLTQYLLEDGYTTNGI---VGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYA 665
ETGSGKTTQ+ Q+LL+D + NGI + CTQPRR+AA++VA+RV+ E +G +GY
Sbjct: 232 ETGSGKTTQIPQFLLDDCFK-NGIPCRIFCTQPRRLAAIAVAERVAAERRERIGQTIGYQ 290
Query: 666 IRFEDVTGPSTLIKYMTDGVLLRETLK-DSDLDKYRVIVMDEAHERSLSTDVLFGILKKV 724
IR E P TL+ + T+GVLLR + DS L +++DE HER +D L L+ +
Sbjct: 291 IRLESRVSPKTLLTFCTNGVLLRTLMAGDSTLSTVTHVIVDEVHERDRFSDFLLTKLRDL 350
Query: 725 VARRRDFKLIVTSATLNAQKFSDFFGSVPIFHIPGRTFPVNTLY 768
+ + KLI++SA L+ F +FGS P+ +I GR F V ++
Sbjct: 351 LQKHPTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFEVKEMF 394
Score = 327 (120.2 bits), Expect = 2.2e-61, Sum P(2) = 2.2e-61
Identities = 98/348 (28%), Positives = 165/348 (47%)
Query: 794 GDILIFMTGQDEIEAACFALKERM---EQLISSTTREVPELLILPIYSQLPADLQAKIFE 850
G ILIF+ G DEI L++R+ ++ + T + ++S + Q K+ +
Sbjct: 638 GAILIFLPGYDEI----VGLRDRILFDDKRFADNTHRYQ---VFMLHSNMQTSDQKKVLK 690
Query: 851 KAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXX 910
G RK I++TNIAETS+TV+ + +VID+G K K ++ + L++ +S
Sbjct: 691 NPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQ 750
Query: 911 XXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFM 970
C+RL++ + N ML PE+ R L + DF+
Sbjct: 751 RKGRAGRCRPGICFRLFSRLRFQN-MLEFQTPELLRMPLQELCLHTKLLAPVNCTIADFL 809
Query: 971 ----DPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCL 1026
+PPP + N++ L + A++ LT+LG+ + + P++P L KM+L L CL
Sbjct: 810 MKAPEPPPALIVRNAVQMLKTIDAMDAWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCL 869
Query: 1027 DEVLTIVSMLSVPSVFFRPKDRAEESDA--AREKFFVQE-SDHLTLLYVYQQWKEHQYRG 1083
D +LTI L+ F P +++ A R++F SDH+ LL +Q W++ + G
Sbjct: 870 DPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRFTAGTFSDHMALLRAFQAWQKARSDG 929
Query: 1084 DW----CEEHYLHVKSLRKAREVRSQLLDILKTLKIPLTSSGHDF-DV 1126
W CE+++L ++ +R+QLL L+ G D DV
Sbjct: 930 -WERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRARGGGDIRDV 976
Score = 37 (18.1 bits), Expect = 3.5e-23, Sum P(2) = 3.5e-23
Identities = 10/33 (30%), Positives = 14/33 (42%)
Query: 340 TYSEEHNYEITESMRLEMEYNSDRAWYDREEGT 372
T E Y+ E R E + + WY +E T
Sbjct: 405 TNKEMLKYK-KEKQREEKQQTTLTEWYSAQENT 436
>TAIR|locus:2052841 [details] [associations]
symbol:HVT1 "helicase in vascular tissue and tapetum"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA;ISS] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;ISS] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000226 "microtubule
cytoskeleton organization" evidence=RCA] [GO:0000911 "cytokinesis
by cell plate formation" evidence=RCA] InterPro:IPR001374
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF01424 Pfam:PF04408 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00393 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 EMBL:CP002685 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 IPI:IPI00521007
RefSeq:NP_850154.2 UniGene:At.19969 ProteinModelPortal:F4INY4
SMR:F4INY4 PRIDE:F4INY4 EnsemblPlants:AT2G30800.1 GeneID:817631
KEGG:ath:AT2G30800 OMA:PYNNVST Uniprot:F4INY4
Length = 1299
Score = 377 (137.8 bits), Expect = 2.3e-61, Sum P(2) = 2.3e-61
Identities = 91/260 (35%), Positives = 145/260 (55%)
Query: 557 AKFSQHMKKGEAVSDFAKSKTLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTT 616
A S +KK +A+ + K R LPI S +D + + NQ GETG GKTT
Sbjct: 165 ASLSSRLKKDKALKEITKL------RSKLPITSFKDAITSAVESNQVILISGETGCGKTT 218
Query: 617 QLTQYLLEDGYT----TNGIVGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVT 672
Q+ QYLL+ ++ T IV CTQPRR++AMSV++R+S E +G+ +GY +R +
Sbjct: 219 QVPQYLLDHMWSSKRETCKIV-CTQPRRISAMSVSERISCERGESIGENIGYKVRLQSKG 277
Query: 673 GPSTLIKYMTDGVLLRETLKD---SDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRR 729
G + + + T+G+LLR + S + I++DE HER +D + I++ ++
Sbjct: 278 GRHSSVVFCTNGILLRVLVGKGSVSSVSDITHIIVDEIHERDCYSDFMLAIIRDLLPSNP 337
Query: 730 DFKLIVTSATLNAQKFSDFFGSVPIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHI 789
+LI+ SATL+A++FS +FG P+ +PG T+PV TLY ED V + +K H+
Sbjct: 338 HLRLILMSATLDAERFSGYFGGCPVVRVPGFTYPVRTLY----LED-VLSILKSGGDNHL 392
Query: 790 TSPP---GDILIFMTGQDEI 806
+S D + +T +D++
Sbjct: 393 SSTNLSISDHKLDLTDEDKL 412
Score = 348 (127.6 bits), Expect = 2.3e-61, Sum P(2) = 2.3e-61
Identities = 104/358 (29%), Positives = 166/358 (46%)
Query: 768 YSKTPCEDYVEAAVKQAMTIHIT--SPPGDILIFMTGQDEIEAACFALKERMEQLISSTT 825
Y T + V+ ++ Q + I S G IL+F+ G D+I K R L +
Sbjct: 524 YMATINPEQVDVSLIQQLMRKICGDSEDGAILVFLPGWDDIN------KTRQRLLENPFF 577
Query: 826 REVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGK 885
+ + I+ ++S +PA Q K+F + G RK ++ATNIAE+++T+D + YVID+G K
Sbjct: 578 ADSAKFDIICLHSMVPAGEQKKVFNRPPPGCRKIVLATNIAESAVTIDDVVYVIDSGRMK 637
Query: 886 MKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQ 945
K Y+P + LQ VS CY LY+ + M VPEI+
Sbjct: 638 EKSYDPYNNVSTLQSSWVSKANAKQRQGRAGRCQPGICYHLYSRLRAAS-MPDFKVPEIK 696
Query: 946 RTNLGNVVXXXXXXXXXXXXXFDFM----DPPPQENILNSMYQLWVLGALNNVGALTDLG 1001
R + + DF+ DPP ++I N++ L +GAL LT+LG
Sbjct: 697 RMPVEELCLQVKILDPNCKTN-DFLQKLLDPPVDQSIANALSILQDIGALTPQEELTELG 755
Query: 1002 WKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAAREKFFV 1061
K P+ P ++KML + CLD LT+ F P E AA K +
Sbjct: 756 EKFGHLPVHPLISKMLFFAVLVNCLDPALTLACAADYKEPFTMPMSPVERQKAAAAKLEL 815
Query: 1062 Q-----ESDHLTLLYVYQQWKEHQYRG---DWCEEHYLHVKSLRKAREVRSQLLDILK 1111
+SDHL ++ ++ WK + RG ++C ++++ +++ ++RSQL LK
Sbjct: 816 ASLCGGDSDHLAVVAAFECWKNAKGRGLSAEFCSQYFVSPSAMKMLDQMRSQLESELK 873
>FB|FBgn0032883 [details] [associations]
symbol:CG9323 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0002151 "G-quadruplex RNA binding"
evidence=IDA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:AE014134 GO:GO:0002151
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GeneTree:ENSGT00550000074257 KO:K14442 EMBL:AY095176
RefSeq:NP_610056.1 UniGene:Dm.11353 SMR:Q8SWT2 MINT:MINT-935813
EnsemblMetazoa:FBtr0081459 GeneID:35339 KEGG:dme:Dmel_CG9323
UCSC:CG9323-RA FlyBase:FBgn0032883 InParanoid:Q8SWT2 OMA:PLGMHLA
OrthoDB:EOG4HQC07 GenomeRNAi:35339 NextBio:793041 Uniprot:Q8SWT2
Length = 942
Score = 395 (144.1 bits), Expect = 2.4e-61, Sum P(2) = 2.4e-61
Identities = 99/272 (36%), Positives = 147/272 (54%)
Query: 502 REIREKQTQNKSRQRFWELAGSQMGNILGVKKTAEQVDADTAVVGEQGEIDFREDAKFSQ 561
+ + +K K +Q+F L V +T E+ +AD V + +D R + Q
Sbjct: 82 QNVDDKNVDAKFQQQFRHLLSVNFEEF--VAETKER-NADLDWVNPK--LDERLQLELGQ 136
Query: 562 HMKKGEAVSDFAKSKTLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQY 621
+ + AK + E R+ LP D+++Q +RENQ G TG GKTTQ+ Q
Sbjct: 137 RQ-----LEENAKKRL--EARKKLPTMKYADDIIQAVRENQVILIVGSTGCGKTTQVPQI 189
Query: 622 LLED----GYTTNGIVGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTL 677
LL+D G ++ + CTQPRR++A+++A+ VS E LG+ VGY IR E
Sbjct: 190 LLDDAISRGCASSCRIICTQPRRISAIAIAEWVSYERCESLGNSVGYQIRLESRKARERA 249
Query: 678 -IKYMTDGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVT 736
I Y T GVLL++ D + V+++DE HERS+ TD+L G+LK ++ R D K+I+
Sbjct: 250 SITYCTTGVLLQQLQSDPLMHNLSVLILDEIHERSVETDLLMGLLKVILPHRPDLKVILM 309
Query: 737 SATLNAQKFSDFFGSVPIFHIPGRTFPVNTLY 768
SAT+ Q F D+F + P+F I G FPV LY
Sbjct: 310 SATVREQDFCDYFNNCPMFRIEGVMFPVKMLY 341
Score = 324 (119.1 bits), Expect = 2.4e-61, Sum P(2) = 2.4e-61
Identities = 90/357 (25%), Positives = 165/357 (46%)
Query: 773 CEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELL 832
CED ++ I P G IL+F+ G D+I + + + ++ + R+ +
Sbjct: 403 CED-IDFIADLVYYICENEPEGAILVFLPGYDKI-SQLYNILDKPKTSKGQRWRD--HMA 458
Query: 833 ILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPK 892
+ P++S + + Q +F + G RK I++T IAETS+T+D + YVI++G K Y+ +
Sbjct: 459 VFPLHSLMQSGEQQAVFRRPPAGQRKVIISTIIAETSVTIDDVVYVINSGRTKATNYDIE 518
Query: 893 MGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNV 952
+ +L V+ CY L++ A + M P PEI R+ L ++
Sbjct: 519 TNIQSLDEVWVTKANTQQRRGRAGRVRPGICYNLFSR-AREDRMDDIPTPEILRSKLESI 577
Query: 953 VXXXXXXXXXXXXXF--DFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLD 1010
+ F ++ P E I + L + AL+ G LT LG + + P+D
Sbjct: 578 ILSLKLLHIDDPYRFLQTLINAPNPEAIKMGVELLKRIEALDQTGTLTPLGMHLAKLPID 637
Query: 1011 PPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAAREKFFVQ-ESDHLTL 1069
P + KM+LM CLD + + + LS S F+ P + D + + SDHL +
Sbjct: 638 PQMGKMILMSALFCCLDPITSAAAALSFKSPFYSPLGKESRVDEIKRRMARNMRSDHLMV 697
Query: 1070 LYVYQQWKEHQY---RGDWCEEHYLHVKSLRKAREVRSQLLDILKTLKIPLTSSGHD 1123
+++ +Y D+C +++L +L++ +++Q ++L K +S+ D
Sbjct: 698 HNTIIAYRDSRYSHAERDFCYKNFLSSMTLQQLERMKNQFSELLYNYKFLASSNCKD 754
>RGD|2318361 [details] [associations]
symbol:Dhx29 "DEAH (Asp-Glu-Ala-His) box polypeptide 29"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:2318361
GO:GO:0005739 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OrthoDB:EOG43FGW2 GeneTree:ENSGT00550000074257
IPI:IPI00372028 Ensembl:ENSRNOT00000013854 Uniprot:D3ZHW0
Length = 1366
Score = 375 (137.1 bits), Expect = 2.8e-61, Sum P(3) = 2.8e-61
Identities = 88/216 (40%), Positives = 127/216 (58%)
Query: 574 KSKTLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLED------GY 627
K + L ++RQ LP+F R +++ ++ ++ GETGSGK+TQ+ +LLED G
Sbjct: 561 KYQRLLKERQQLPVFKHRASIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNDCGA 620
Query: 628 TTNGIVGCTQPRRVAAMSVAKRVSEEMDTELG-----DKVGYAIRFEDVTGPSTLIKYMT 682
IV CTQPRR++A+S+A RV EE+ E G GY IR E ST + Y T
Sbjct: 621 RKCNIV-CTQPRRISAVSLATRVCEELGCEGGPGGRNSLCGYQIRMESRASESTRLLYCT 679
Query: 683 DGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNA 742
GVLLR+ +D L +++DE HERS+ +D L ILK+++ +R D LI+ SAT+++
Sbjct: 680 TGVLLRKLQEDGLLADVSHVIVDEVHERSVQSDFLLVILKEILQKRSDLHLILMSATVDS 739
Query: 743 QKFSDFFGSVPIFHIPGRTFPVNTLYSKTPCEDYVE 778
KFS +F PI I GR++PV + ED VE
Sbjct: 740 DKFSTYFTHCPILRISGRSYPVEVFH----LEDIVE 771
Score = 349 (127.9 bits), Expect = 2.8e-61, Sum P(3) = 2.8e-61
Identities = 104/362 (28%), Positives = 165/362 (45%)
Query: 794 GDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELL-ILPIYSQLPADLQAKIFEKA 852
G +LIF+ G I+ ++ L+S+ R E ++ ++S L QA F
Sbjct: 868 GAVLIFLPGLAHIQ--------QLYDLLSNDRRFYSERYQLIALHSVLSTQDQAAAFMLP 919
Query: 853 KEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXX 912
G RK ++ATNIAET +T+ + +VIDTG K Y+ M +L VS
Sbjct: 920 PPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQ 979
Query: 913 XXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXF--DFM 970
C+RLYT + L VPEI R L + F +
Sbjct: 980 GRAGRVRDGFCFRLYTRERF-EGFLEYSVPEILRVPLEELCLHIMKCDLGSPEDFLSKAL 1038
Query: 971 DPPPQENILNSMYQLWVLGALN-NVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEV 1029
DPP + I N+M L +GA + LT LG + P++ + KML+ G GCL+ V
Sbjct: 1039 DPPQPQVISNAMNLLRKIGACEPSEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLEPV 1098
Query: 1030 LTIVSMLSVPSVFFRPKDRAEESDAAREKFFVQESDHLTLLYVYQQWKEHQYRG------ 1083
T+ ++++ S F P R +E+D A+ V +SDHLT+ Y WK+ Q G
Sbjct: 1099 ATLAAVMTEKSPFITPIGRKDEADLAKSSLAVADSDHLTIYNAYLGWKKAQQEGGFRSEI 1158
Query: 1084 DWCEEHYLHVKSLRKAREVRSQLLDILKTLKIPLTSSGHDFDVVRKAICSAYFHNAARLK 1143
+C+ ++L+ SL +V+ +L+ +++ ++S +K + F + A LK
Sbjct: 1159 SYCQRNFLNRTSLLTLEDVKQELMKLVRAAGFSSSTSWEG----KKGPQALSFQDIALLK 1214
Query: 1144 GV 1145
V
Sbjct: 1215 AV 1216
Score = 53 (23.7 bits), Expect = 2.8e-61, Sum P(3) = 2.8e-61
Identities = 12/33 (36%), Positives = 14/33 (42%)
Query: 248 EGYSNSSKRYQPSPSPMFVGASPDARLVSPLST 280
EG+S + QP P F A L PL T
Sbjct: 171 EGFSQEFEEQQPKSRPKFQSVQIQATLSPPLQT 203
>UNIPROTKB|Q7Z478 [details] [associations]
symbol:DHX29 "ATP-dependent RNA helicase DHX29"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005739
GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AY036974 EMBL:BC056219 EMBL:AL834496
EMBL:BX648101 EMBL:BX648269 EMBL:AL079292 EMBL:AF070639
IPI:IPI00217413 RefSeq:NP_061903.2 UniGene:Hs.740463
ProteinModelPortal:Q7Z478 SMR:Q7Z478 IntAct:Q7Z478
MINT:MINT-1376685 STRING:Q7Z478 PhosphoSite:Q7Z478 DMDM:110278938
PaxDb:Q7Z478 PeptideAtlas:Q7Z478 PRIDE:Q7Z478
Ensembl:ENST00000251636 GeneID:54505 KEGG:hsa:54505 UCSC:uc003jpx.3
CTD:54505 GeneCards:GC05M054552 H-InvDB:HIX0004866 HGNC:HGNC:15815
HPA:HPA038317 HPA:HPA038318 MIM:612720 neXtProt:NX_Q7Z478
PharmGKB:PA27215 HOGENOM:HOG000247063 HOVERGEN:HBG081436
InParanoid:Q7Z478 OMA:WLLYQEK OrthoDB:EOG43FGW2 PhylomeDB:Q7Z478
ChiTaRS:DHX29 GenomeRNAi:54505 NextBio:56869 Bgee:Q7Z478
CleanEx:HS_DHX29 Genevestigator:Q7Z478 GermOnline:ENSG00000067248
Uniprot:Q7Z478
Length = 1369
Score = 377 (137.8 bits), Expect = 3.3e-61, Sum P(5) = 3.3e-61
Identities = 86/216 (39%), Positives = 128/216 (59%)
Query: 574 KSKTLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTN--- 630
K + L ++RQ LP+F RD +++ ++ ++ GETGSGK+TQ+ +LLED
Sbjct: 561 KYQKLLKERQQLPVFKHRDSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNEWEA 620
Query: 631 ---GIVGCTQPRRVAAMSVAKRVSEEMDTELG-----DKVGYAIRFEDVTGPSTLIKYMT 682
IV CTQPRR++A+S+A RV +E+ E G GY IR E ST + Y T
Sbjct: 621 SKCNIV-CTQPRRISAVSLANRVCDELGCENGPGGRNSLCGYQIRMESRACESTRLLYCT 679
Query: 683 DGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNA 742
GVLLR+ +D L +++DE HERS+ +D L ILK+++ +R D LI+ SAT+++
Sbjct: 680 TGVLLRKLQEDGLLSNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSATVDS 739
Query: 743 QKFSDFFGSVPIFHIPGRTFPVNTLYSKTPCEDYVE 778
+KFS +F PI I GR++PV + ED +E
Sbjct: 740 EKFSTYFTHCPILRISGRSYPVEVFH----LEDIIE 771
Score = 351 (128.6 bits), Expect = 3.3e-61, Sum P(5) = 3.3e-61
Identities = 107/362 (29%), Positives = 167/362 (46%)
Query: 794 GDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELL-ILPIYSQLPADLQAKIFEKA 852
G +LIF+ G I+ ++ L+S+ R E ++ ++S L QA F
Sbjct: 868 GAVLIFLPGLAHIQ--------QLYDLLSNDRRFYSERYKVIALHSILSTQDQAAAFTLP 919
Query: 853 KEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXX 912
G RK ++ATNIAET +T+ + +VIDTG K Y+ M +L VS
Sbjct: 920 PPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQ 979
Query: 913 XXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXF--DFM 970
C+R+YT + M S VPEI R L + F +
Sbjct: 980 GRAGRVRDGFCFRMYTRERFEGFMDYS-VPEILRVPLEELCLHIMKCNLGSPEDFLSKAL 1038
Query: 971 DPPPQENILNSMYQLWVLGALN-NVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEV 1029
DPP + I N+M L +GA N LT LG + P++ + KML+ G GCLD V
Sbjct: 1039 DPPQLQVISNAMNLLRKIGACELNEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPV 1098
Query: 1030 LTIVSMLSVPSVFFRPKDRAEESDAAREKFFVQESDHLTLLYVYQQWK----EHQYRGD- 1084
T+ ++++ S F P R +E+D A+ + +SDHLT+ Y WK E YR +
Sbjct: 1099 ATLAAVMTEKSPFTTPIGRKDEADLAKSALAMADSDHLTIYNAYLGWKKARQEGGYRSEI 1158
Query: 1085 -WCEEHYLHVKSLRKAREVRSQLLDILKTLKIPLTSSGHDFDVVRKAICSAYFHNAARLK 1143
+C ++L+ SL +V+ +L+ ++K +++ ++ R A + F A LK
Sbjct: 1159 TYCRRNFLNRTSLLTLEDVKQELIKLVKAAGFSSSTTSTSWEGNR-ASQTLSFQEIALLK 1217
Query: 1144 GV 1145
V
Sbjct: 1218 AV 1219
Score = 56 (24.8 bits), Expect = 3.3e-61, Sum P(5) = 3.3e-61
Identities = 13/43 (30%), Positives = 18/43 (41%)
Query: 248 EGYSNSSKRYQPSPSPMFVGASPDARLVSPLSTPRSNGYAASP 290
EG+S + QP P F A + PL P++ Y P
Sbjct: 173 EGFSQEFEEQQPKSRPKFQSPQIQATISPPLQ-PKTKTYEEDP 214
Score = 46 (21.3 bits), Expect = 3.3e-61, Sum P(5) = 3.3e-61
Identities = 12/38 (31%), Positives = 20/38 (52%)
Query: 1159 LHPSSAIYGLGYTPEYVVYHELILTTKEYMQCATAVEP 1196
+HPSS L T +++Y E I + Y++ T + P
Sbjct: 1256 VHPSSVNRDL-QTHGWLLYQEKIRYARVYLRETTLITP 1292
Score = 40 (19.1 bits), Expect = 3.3e-61, Sum P(5) = 3.3e-61
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 325 SRESSQSFEDGVADETYS----EEHNYEITESMR 354
S + +S+E+ V+DE +S E N E E +R
Sbjct: 517 SEDPEESWENLVSDEDFSALSLESANVEDLEPVR 550
Score = 39 (18.8 bits), Expect = 1.1e-25, Sum P(3) = 1.1e-25
Identities = 17/54 (31%), Positives = 24/54 (44%)
Query: 631 GIVGCTQPR----RVAAMSVAKRVSEEMDTELGDKVGYAIRF-EDVTGPSTLIK 679
GI G Q + R A + A S E + G K+ Y+ D +GP+ L K
Sbjct: 31 GIAGEAQSKKPVSRPATAAAAAAGSREPRVKQGPKI-YSFNSTNDSSGPANLDK 83
>UNIPROTKB|F1SLN0 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 EMBL:CU929534
Ensembl:ENSSSCT00000018413 Uniprot:F1SLN0
Length = 1367
Score = 380 (138.8 bits), Expect = 3.3e-61, Sum P(3) = 3.3e-61
Identities = 86/216 (39%), Positives = 130/216 (60%)
Query: 574 KSKTLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLED------GY 627
K + L ++RQ LP+F R+ +++ ++ ++ GETGSGK+TQ+ +LLED G
Sbjct: 558 KYQRLLKERQQLPVFKHRNSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNEWGT 617
Query: 628 TTNGIVGCTQPRRVAAMSVAKRVSEEMDTELG-----DKVGYAIRFEDVTGPSTLIKYMT 682
+ IV CTQPRR++A+S+A RV +E+ E G GY IR E ST + Y T
Sbjct: 618 SKCNIV-CTQPRRISAVSLATRVCDELGCENGPGGKNSLCGYQIRMESRASESTRLLYCT 676
Query: 683 DGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNA 742
GVLLR+ +D L +++DE HERS+ +D L ILK+++ +R D LI+ SAT+++
Sbjct: 677 TGVLLRKLQEDGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSATVDS 736
Query: 743 QKFSDFFGSVPIFHIPGRTFPVNTLYSKTPCEDYVE 778
+KFS +F PI I GR++PV + ED +E
Sbjct: 737 EKFSTYFTHCPILRISGRSYPVEVFH----LEDIIE 768
Score = 351 (128.6 bits), Expect = 3.3e-61, Sum P(3) = 3.3e-61
Identities = 100/330 (30%), Positives = 156/330 (47%)
Query: 794 GDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELL-ILPIYSQLPADLQAKIFEKA 852
G +LIF+ G I+ ++ L+S+ R E ++ ++S L QA F
Sbjct: 868 GAVLIFLPGLAHIQ--------QLYDLLSTDRRFFSERYKVIALHSILSTQDQAAAFTLP 919
Query: 853 KEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXX 912
+G RK ++ATNIAET +T+ + +VIDTG K Y+ M +L VS
Sbjct: 920 PQGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQ 979
Query: 913 XXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXF--DFM 970
C+R+YT + M S VPEI R L + F +
Sbjct: 980 GRAGRVRDGFCFRMYTRERFEGFMDYS-VPEILRVPLEELCLHIMKCNLGSPEDFLSKAL 1038
Query: 971 DPPPQENILNSMYQLWVLGALN-NVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEV 1029
DPP + I N+M+ L +GA N LT LG + P++ + KML+ G GCLD V
Sbjct: 1039 DPPQLQVISNAMHLLRKIGACELNEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPV 1098
Query: 1030 LTIVSMLSVPSVFFRPKDRAEESDAAREKFFVQESDHLTLLYVYQQWKEHQ----YRGD- 1084
T+ ++++ S F P R +E+D A+ + +SDHLT+ Y WK+ Q YR +
Sbjct: 1099 ATLAAVMTEKSPFTTPIGRKDEADLAKSALAMADSDHLTIYNAYLGWKKAQQEGGYRSEI 1158
Query: 1085 -WCEEHYLHVKSLRKAREVRSQLLDILKTL 1113
+C ++L+ SL E++ + +LK +
Sbjct: 1159 AYCRRNFLNRTSLLTLEEIKRRRTTLLKLI 1188
Score = 45 (20.9 bits), Expect = 3.3e-61, Sum P(3) = 3.3e-61
Identities = 11/36 (30%), Positives = 16/36 (44%)
Query: 248 EGYSNSSKRYQPSPSPMFVGASPDARLVSPLSTPRS 283
EG+S + QP P F A + PL P++
Sbjct: 171 EGFSQEFEEQQPKNRPKFQSPQIQATMSPPLQ-PKT 205
>UNIPROTKB|I3LQ47 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:WLLYQEK GeneTree:ENSGT00550000074257
EMBL:CU929534 Ensembl:ENSSSCT00000025611 Uniprot:I3LQ47
Length = 1370
Score = 380 (138.8 bits), Expect = 1.1e-60, Sum P(3) = 1.1e-60
Identities = 86/216 (39%), Positives = 130/216 (60%)
Query: 574 KSKTLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLED------GY 627
K + L ++RQ LP+F R+ +++ ++ ++ GETGSGK+TQ+ +LLED G
Sbjct: 558 KYQRLLKERQQLPVFKHRNSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNEWGT 617
Query: 628 TTNGIVGCTQPRRVAAMSVAKRVSEEMDTELG-----DKVGYAIRFEDVTGPSTLIKYMT 682
+ IV CTQPRR++A+S+A RV +E+ E G GY IR E ST + Y T
Sbjct: 618 SKCNIV-CTQPRRISAVSLATRVCDELGCENGPGGKNSLCGYQIRMESRASESTRLLYCT 676
Query: 683 DGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNA 742
GVLLR+ +D L +++DE HERS+ +D L ILK+++ +R D LI+ SAT+++
Sbjct: 677 TGVLLRKLQEDGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSATVDS 736
Query: 743 QKFSDFFGSVPIFHIPGRTFPVNTLYSKTPCEDYVE 778
+KFS +F PI I GR++PV + ED +E
Sbjct: 737 EKFSTYFTHCPILRISGRSYPVEVFH----LEDIIE 768
Score = 346 (126.9 bits), Expect = 1.1e-60, Sum P(3) = 1.1e-60
Identities = 100/327 (30%), Positives = 154/327 (47%)
Query: 794 GDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELL-ILPIYSQLPADLQAKIFEKA 852
G +LIF+ G I+ ++ L+S+ R E ++ ++S L QA F
Sbjct: 868 GAVLIFLPGLAHIQ--------QLYDLLSTDRRFFSERYKVIALHSILSTQDQAAAFTLP 919
Query: 853 KEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXX 912
+G RK ++ATNIAET +T+ + +VIDTG K Y+ M +L VS
Sbjct: 920 PQGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQ 979
Query: 913 XXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXF--DFM 970
C+R+YT + M S VPEI R L + F +
Sbjct: 980 GRAGRVRDGFCFRMYTRERFEGFMDYS-VPEILRVPLEELCLHIMKCNLGSPEDFLSKAL 1038
Query: 971 DPPPQENILNSMYQLWVLGALN-NVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEV 1029
DPP + I N+M+ L +GA N LT LG + P++ + KML+ G GCLD V
Sbjct: 1039 DPPQLQVISNAMHLLRKIGACELNEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPV 1098
Query: 1030 LTIVSMLSVPSVFFRPKDRAEESDAAREKFFVQESDHLTLLYVYQQWKEHQ----YRGD- 1084
T+ ++++ S F P R +E+D A+ + +SDHLT+ Y WK+ Q YR +
Sbjct: 1099 ATLAAVMTEKSPFTTPIGRKDEADLAKSALAMADSDHLTIYNAYLGWKKAQQEGGYRSEI 1158
Query: 1085 -WCEEHYLHVKSLRKAREVRSQLLDIL 1110
+C ++L+ SL R+ LL ++
Sbjct: 1159 AYCRRNFLNRTSLLTLERRRTTLLKLM 1185
Score = 45 (20.9 bits), Expect = 1.1e-60, Sum P(3) = 1.1e-60
Identities = 11/36 (30%), Positives = 16/36 (44%)
Query: 248 EGYSNSSKRYQPSPSPMFVGASPDARLVSPLSTPRS 283
EG+S + QP P F A + PL P++
Sbjct: 171 EGFSQEFEEQQPKNRPKFQSPQIQATMSPPLQ-PKT 205
>UNIPROTKB|E1C388 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 CTD:54505 OMA:WLLYQEK
GeneTree:ENSGT00550000074257 EMBL:AADN02054528 EMBL:AADN02054529
EMBL:AADN02054530 IPI:IPI00580778 RefSeq:XP_424728.2
UniGene:Gga.12357 Ensembl:ENSGALT00000023700 GeneID:427136
KEGG:gga:427136 NextBio:20828443 Uniprot:E1C388
Length = 1372
Score = 393 (143.4 bits), Expect = 2.0e-60, Sum P(4) = 2.0e-60
Identities = 85/209 (40%), Positives = 128/209 (61%)
Query: 580 EQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNGI----VGC 635
++RQ LP+F R +++ +++++ GETGSGK+TQ+ +LLED G + C
Sbjct: 569 KERQELPVFKHRHSIVETLKKHRVVVVAGETGSGKSTQVPHFLLEDLLLDEGTRKCNIVC 628
Query: 636 TQPRRVAAMSVAKRVSEEMDTELG-----DKVGYAIRFEDVTGPSTLIKYMTDGVLLRET 690
TQPRR++A+S+A RV EE+ E G GY IR E TG +T + Y T GVLLR+
Sbjct: 629 TQPRRISAVSLATRVCEELGCESGPGGKNSLCGYQIRMESRTGEATRLLYCTTGVLLRKL 688
Query: 691 LKDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFG 750
+D L +++DE HERS+ +D L ILK+++ +R D LI+ SAT++++KFS +F
Sbjct: 689 QEDGLLSSISHVIVDEVHERSVHSDFLLVILKEILHKRSDLHLILMSATVDSEKFSSYFA 748
Query: 751 SVPIFHIPGRTFPVNTLYSKTPCEDYVEA 779
PI I GR++PV + ED +EA
Sbjct: 749 HCPILRISGRSYPVEVFH----VEDVIEA 773
Score = 337 (123.7 bits), Expect = 2.0e-60, Sum P(4) = 2.0e-60
Identities = 104/363 (28%), Positives = 163/363 (44%)
Query: 794 GDILIFMTGQDEIEAACFALKERMEQLISSTTRE--VPELLILPIYSQLPADLQAKIFEK 851
G +LIF+ G I+ ++ LIS+ R ++ ++S L QA F
Sbjct: 869 GAVLIFLPGLAHIQ--------QLYDLISTDRRFSLCDRHRLIALHSVLSTQDQAAAFTV 920
Query: 852 AKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXX 911
G RK ++ATNIAET +T+ + +VID+G K Y+ M +L+ VS
Sbjct: 921 PPLGVRKIVLATNIAETGITIPDVVFVIDSGRTKENRYHESSQMSSLEETFVSKASALQR 980
Query: 912 XXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXF--DF 969
C+R+YT + + M S VPEI R L + F
Sbjct: 981 QGRAGRVRDGFCFRMYTRDRFESFMEYS-VPEILRVPLEELCLHIMKCNLGSPEDFLSRA 1039
Query: 970 MDPPPQENILNSMYQLWVLGALN-NVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDE 1028
+DPP + I N+M L +GA N LT LG + P++ + KML+ G GCLD
Sbjct: 1040 LDPPQPQVIGNAMNLLRKIGACQLNEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLDP 1099
Query: 1029 VLTIVSMLSVPSVFFRPKDRAEESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGD---- 1084
V T+ ++++ S F P R +E+D A+ + SDHLT+ Y WK+ + G
Sbjct: 1100 VATLAAVMTEKSPFTTPIGRKDEADLAKSSIALAVSDHLTIYNAYLGWKKARQEGGHRAE 1159
Query: 1085 --WCEEHYLHVKSLRKAREVRSQLLDILKTLKIPLTSSGHDFDVVRKAICSAYFHNAARL 1142
+C ++L+ SL +V+ +L+ +++ ++ H D S H A L
Sbjct: 1160 MTYCRRNFLNRTSLLTLEDVKQELIKLVRAAGFTAPTTQHRLDG-NGGTQSLSLHEIALL 1218
Query: 1143 KGV 1145
K V
Sbjct: 1219 KAV 1221
Score = 44 (20.5 bits), Expect = 2.0e-60, Sum P(4) = 2.0e-60
Identities = 11/38 (28%), Positives = 19/38 (50%)
Query: 1159 LHPSSAIYGLGYTPEYVVYHELILTTKEYMQCATAVEP 1196
+HPSS L +++Y E + K Y++ T + P
Sbjct: 1258 VHPSSVNRDL-QVHGWLLYQEKVRYAKVYLRETTLISP 1294
Score = 42 (19.8 bits), Expect = 2.0e-60, Sum P(4) = 2.0e-60
Identities = 21/99 (21%), Positives = 45/99 (45%)
Query: 336 VADETYSEEHNYEITESMRLEMEYNSDRAW---Y-----DREEGTTMFDTDSSSFI---- 383
+AD+ +++N E E+ E + S + W Y D E+ ++ +TD F
Sbjct: 209 LADKK-KKDNNPETKETNMKEQKEMSMKEWILRYAEQQSDEEKNESVKETDEEKFDPNER 267
Query: 384 ---LGDDASYQKKEVELAKRLVRKDGSRMSLAQSKKLSQ 419
L S K++ ++K+ K G +++ + +++ Q
Sbjct: 268 YVHLAAKLSEAKEQASISKQDKDKQGQKVAQEKIRRIQQ 306
>UNIPROTKB|I3LG95 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 EMBL:CU929534
Ensembl:ENSSSCT00000030291 Uniprot:I3LG95
Length = 1370
Score = 380 (138.8 bits), Expect = 2.3e-60, Sum P(3) = 2.3e-60
Identities = 86/216 (39%), Positives = 130/216 (60%)
Query: 574 KSKTLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLED------GY 627
K + L ++RQ LP+F R+ +++ ++ ++ GETGSGK+TQ+ +LLED G
Sbjct: 558 KYQRLLKERQQLPVFKHRNSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNEWGT 617
Query: 628 TTNGIVGCTQPRRVAAMSVAKRVSEEMDTELG-----DKVGYAIRFEDVTGPSTLIKYMT 682
+ IV CTQPRR++A+S+A RV +E+ E G GY IR E ST + Y T
Sbjct: 618 SKCNIV-CTQPRRISAVSLATRVCDELGCENGPGGKNSLCGYQIRMESRASESTRLLYCT 676
Query: 683 DGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNA 742
GVLLR+ +D L +++DE HERS+ +D L ILK+++ +R D LI+ SAT+++
Sbjct: 677 TGVLLRKLQEDGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSATVDS 736
Query: 743 QKFSDFFGSVPIFHIPGRTFPVNTLYSKTPCEDYVE 778
+KFS +F PI I GR++PV + ED +E
Sbjct: 737 EKFSTYFTHCPILRISGRSYPVEVFH----LEDIIE 768
Score = 343 (125.8 bits), Expect = 2.3e-60, Sum P(3) = 2.3e-60
Identities = 98/320 (30%), Positives = 151/320 (47%)
Query: 794 GDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELL-ILPIYSQLPADLQAKIFEKA 852
G +LIF+ G I+ ++ L+S+ R E ++ ++S L QA F
Sbjct: 868 GAVLIFLPGLAHIQ--------QLYDLLSTDRRFFSERYKVIALHSILSTQDQAAAFTLP 919
Query: 853 KEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXX 912
+G RK ++ATNIAET +T+ + +VIDTG K Y+ M +L VS
Sbjct: 920 PQGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQ 979
Query: 913 XXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXF--DFM 970
C+R+YT + M S VPEI R L + F +
Sbjct: 980 GRAGRVRDGFCFRMYTRERFEGFMDYS-VPEILRVPLEELCLHIMKCNLGSPEDFLSKAL 1038
Query: 971 DPPPQENILNSMYQLWVLGALN-NVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEV 1029
DPP + I N+M+ L +GA N LT LG + P++ + KML+ G GCLD V
Sbjct: 1039 DPPQLQVISNAMHLLRKIGACELNEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPV 1098
Query: 1030 LTIVSMLSVPSVFFRPKDRAEESDAAREKFFVQESDHLTLLYVYQQWKEHQ----YRGD- 1084
T+ ++++ S F P R +E+D A+ + +SDHLT+ Y WK+ Q YR +
Sbjct: 1099 ATLAAVMTEKSPFTTPIGRKDEADLAKSALAMADSDHLTIYNAYLGWKKAQQEGGYRSEI 1158
Query: 1085 -WCEEHYLHVKSLRKAREVR 1103
+C ++L+ SL E++
Sbjct: 1159 AYCRRNFLNRTSLLTLEEIK 1178
Score = 45 (20.9 bits), Expect = 2.3e-60, Sum P(3) = 2.3e-60
Identities = 11/36 (30%), Positives = 16/36 (44%)
Query: 248 EGYSNSSKRYQPSPSPMFVGASPDARLVSPLSTPRS 283
EG+S + QP P F A + PL P++
Sbjct: 171 EGFSQEFEEQQPKNRPKFQSPQIQATMSPPLQ-PKT 205
>UNIPROTKB|F1NS70 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 OMA:RAFWESS EMBL:AADN02056192 EMBL:AADN02056193
IPI:IPI00591470 Ensembl:ENSGALT00000000247 Uniprot:F1NS70
Length = 1339
Score = 409 (149.0 bits), Expect = 6.4e-60, Sum P(3) = 6.4e-60
Identities = 87/224 (38%), Positives = 136/224 (60%)
Query: 550 EIDFREDAKFSQHMKKGEAVSDFAKSKTLAEQ-RQYLPIFSVRDELLQVIRENQXXXXXG 608
E + +E K S + G + ++ + RQ LP+F ++E++++I+EN+ G
Sbjct: 67 ETENKEVGKTSGRLSSGIPQVPLKRGESEYDSFRQSLPVFEKKEEIVKIIKENKVVLIVG 126
Query: 609 ETGSGKTTQLTQYLLEDGYTTNGI---VGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYA 665
ETGSGKTTQ+ Q+LL+D Y NG+ + CTQPRR+A ++VA+RV+ E ++G VGY
Sbjct: 127 ETGSGKTTQIPQFLLDDCYE-NGVPCRIFCTQPRRLAVIAVAERVAAERREKVGQTVGYQ 185
Query: 666 IRFEDVTGPSTLIKYMTDGVLLRETLK-DSDLDKYRVIVMDEAHERSLSTDVLFGILKKV 724
IR E P TL+ + T+G+LLR + DS L +++DE HER +D L L+ +
Sbjct: 186 IRLESRVSPRTLLTFCTNGILLRTLMAGDSALSTVTHVIVDEVHERDRFSDFLLIKLRDI 245
Query: 725 VARRRDFKLIVTSATLNAQKFSDFFGSVPIFHIPGRTFPVNTLY 768
+ + + KLI++SA L+A F +FGS P+ HI GR F V ++
Sbjct: 246 LQNQTNLKLIISSAALDANLFIKYFGSCPVIHIQGRPFEVKEMF 289
Score = 316 (116.3 bits), Expect = 6.4e-60, Sum P(3) = 6.4e-60
Identities = 101/353 (28%), Positives = 166/353 (47%)
Query: 790 TSPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVP----ELLILPIYSQLPADLQ 845
+S G ILIF+ G DEI +L++R +I R V + + ++S + Q
Sbjct: 529 SSDGGAILIFLPGYDEI----ISLRDR---IIFDDKRFVDNAHSKYQVFMLHSNMQTLDQ 581
Query: 846 AKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSX 905
+ + G RK I++TNIAETS+TV+ + +VID+G K K ++ + L+ +S
Sbjct: 582 KNVLKTPPSGIRKIILSTNIAETSITVNDVVFVIDSGKMKEKSFDALSCVTMLKTVWISK 641
Query: 906 XXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXX 965
C+ L++ + N ML PE++R L +
Sbjct: 642 ASAIQRRGRAGRCRPGVCFHLFSRLRFQN-MLEFQTPELRRMPLQELCLHTKLLAPVNCP 700
Query: 966 XFDFM----DPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGE 1021
DF+ DPPP + N++ L + A++ LT+LG+ + E P++P L KM+L
Sbjct: 701 VVDFLMKAPDPPPALIVRNAIQMLKKIDAMDVWEDLTELGYHLAELPVEPHLGKMVLCAV 760
Query: 1022 QLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDA--AREKFFVQE-SDHLTLLYVYQQWKE 1078
L CLD +LTI L+ F P +++ A R++ SDH+ LL +Q W++
Sbjct: 761 VLKCLDPILTIACTLAYRDPFVLPTVASQKRAAMLCRKRLAAGTFSDHMVLLRAFQAWQK 820
Query: 1079 HQYRGDW----CEEHYLHVKSLRKAREVRSQLLDILKTLKIPLTSSGHDF-DV 1126
+ G W CE+++L ++ +R+QLL L+ L G D DV
Sbjct: 821 ARSDG-WERVFCEKNFLSQATMEIIIGMRTQLLGQLRALGFVRARGGADIRDV 872
Score = 39 (18.8 bits), Expect = 2.6e-32, Sum P(2) = 2.6e-32
Identities = 14/41 (34%), Positives = 19/41 (46%)
Query: 753 PIFHIPGRTFPVNTLYSK-TPCEDYVEAAVKQAMTIHITSP 792
P FH P R N + SK T E +++VK + SP
Sbjct: 1132 PAFHQPRRHKEKNVVASKRTSDEKSDQSSVKSTDSSCYPSP 1172
Score = 38 (18.4 bits), Expect = 3.3e-32, Sum P(2) = 3.3e-32
Identities = 8/29 (27%), Positives = 16/29 (55%)
Query: 1037 SVPSVFFRPKDRAEESDAAREKFFVQESD 1065
S P F +P+ E++ A ++ ++SD
Sbjct: 1129 SAPPAFHQPRRHKEKNVVASKRTSDEKSD 1157
Score = 37 (18.1 bits), Expect = 6.4e-60, Sum P(3) = 6.4e-60
Identities = 14/76 (18%), Positives = 34/76 (44%)
Query: 1173 EYVVYHELILTTK-EYMQCATAVEPQWLSEL-GPMFF--SVKDSDTSMLEHK-KKQKESK 1227
++++Y E+ + ++C + V P ++ GP + S ++ +S
Sbjct: 944 DWLIYDEMTRAHRIANIRCCSVVTPVTVALFSGPARLPRNALQEPLSFRGNRVSNDNDSD 1003
Query: 1228 TAMEEEMENLRKIQAD 1243
+ ME+E N+ ++ D
Sbjct: 1004 SGMEDERSNVALLKLD 1019
>UNIPROTKB|E2QZR7 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 GO:GO:0008026
InterPro:IPR007275 Pfam:PF04146 PROSITE:PS50882 OMA:RAFWESS
EMBL:AAEX03007702 Ensembl:ENSCAFT00000000357 Uniprot:E2QZR7
Length = 1376
Score = 390 (142.3 bits), Expect = 7.5e-60, Sum P(2) = 7.5e-60
Identities = 87/225 (38%), Positives = 135/225 (60%)
Query: 550 EIDFREDAKFSQHMKKGEAVSDFAKSKTLAEQ-RQYLPIFSVRDELLQVIRENQXXXXXG 608
E + RE +K S + G + ++ + RQ LP+F ++E++++I+EN+ G
Sbjct: 156 EAENREMSKTSGRLNNGIPQIPVKRGESEFDSFRQSLPVFEKQEEIVKIIKENKVVLIVG 215
Query: 609 ETGSGKTTQLTQYLLEDGYTTNGI---VGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYA 665
ETGSGKTTQ+ Q+LL+D + NGI + CTQPRR+AA++VA+RV+ E +G +GY
Sbjct: 216 ETGSGKTTQIPQFLLDDCFK-NGIPCRIFCTQPRRLAAIAVAERVAAERRERIGQTIGYQ 274
Query: 666 IRFEDV-TGPSTLIKYMTDGVLLRETLK-DSDLDKYRVIVMDEAHERSLSTDVLFGILKK 723
IR E P TL+ + T+GVLLR + DS L +++DE HER +D L L+
Sbjct: 275 IRLESRRVSPKTLLTFCTNGVLLRTLMAGDSTLSTVTHVIVDEVHERDRFSDFLLTKLRD 334
Query: 724 VVARRRDFKLIVTSATLNAQKFSDFFGSVPIFHIPGRTFPVNTLY 768
++ + KLI++SA L+ F +FGS P+ +I GR F V ++
Sbjct: 335 LLQKHPTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFEVKEMF 379
Score = 321 (118.1 bits), Expect = 7.5e-60, Sum P(2) = 7.5e-60
Identities = 97/346 (28%), Positives = 164/346 (47%)
Query: 796 ILIFMTGQDEIEAACFALKERM---EQLISSTTREVPELLILPIYSQLPADLQAKIFEKA 852
ILIF+ G DEI L++R+ ++ + T + ++S + Q K+ +
Sbjct: 625 ILIFLPGYDEI----VGLRDRILFDDKRFADNTHRYQ---VFMLHSNMQTSDQKKVLKNP 677
Query: 853 KEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXX 912
G RK I++TNIAETS+TV+ + +VID+G K K ++ + L++ +S
Sbjct: 678 PAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAVQRK 737
Query: 913 XXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFM-- 970
C+RL++ + N ML PE+ R L + DF+
Sbjct: 738 GRAGRCRPGICFRLFSRLRFQN-MLEFQTPELLRMPLQELCLHTKLLAPVNCPIADFLMK 796
Query: 971 --DPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDE 1028
+PPP + N++ L + A++ LT+LG+ + + P++P L KM+L L CLD
Sbjct: 797 APEPPPALIVRNAVQMLKTIDAMDAWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDP 856
Query: 1029 VLTIVSMLSVPSVFFRPKDRAEESDA--AREKFFVQE-SDHLTLLYVYQQWKEHQYRGDW 1085
+LTI L+ F P +++ A R++F SDH+ LL +Q W++ + G W
Sbjct: 857 ILTIACTLAYRDPFVLPTQASQKRAAMLCRKRFTAGTFSDHMALLRAFQAWQKARSDG-W 915
Query: 1086 ----CEEHYLHVKSLRKAREVRSQLLDILKTLKIPLTSSGHDF-DV 1126
CE+++L ++ +R+QLL L+ G D DV
Sbjct: 916 ERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRARGGGDIRDV 961
Score = 40 (19.1 bits), Expect = 2.5e-30, Sum P(2) = 2.5e-30
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 993 NVGALTDLGWKMVEFPLDPPLAKMLLMGEQ 1022
N+ AL W + F LDP A +LL Q
Sbjct: 1047 NLAALKLDEW--LNFKLDPEAASLLLQLRQ 1074
Score = 38 (18.4 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 340 TYSEEHNYEITESMRLEMEYNSDRAWYDREEGT 372
T E Y+ E R E + ++ WY +E T
Sbjct: 390 TNKEMLKYK-KEKQREEKQQSTLTEWYSAQENT 421
>TAIR|locus:2196265 [details] [associations]
symbol:AT1G58060 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
IPI:IPI00533149 RefSeq:NP_176103.2 UniGene:At.27872
ProteinModelPortal:F4I9Q5 SMR:F4I9Q5 PRIDE:F4I9Q5
EnsemblPlants:AT1G58060.1 GeneID:842173 KEGG:ath:AT1G58060
OMA:FLSYKSP Uniprot:F4I9Q5
Length = 1459
Score = 350 (128.3 bits), Expect = 1.6e-58, Sum P(5) = 1.6e-58
Identities = 92/252 (36%), Positives = 138/252 (54%)
Query: 529 LGVKKTAEQVDADTAVVGEQGEIDFREDAKFSQHMKKGEAVSDFAKSKTLAEQRQYLPIF 588
LGV K+ + D+ + E + +++ K K+ + D K++T LPI
Sbjct: 569 LGVVKSNNRAKRDSYIEAECLSLQRKQENK-----KRTQKYKDMLKTRTA------LPIS 617
Query: 589 SVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLED----GYTTNGIVGCTQPRRVAAM 644
V++ +LQ ++E GETGSGKTTQ+ Q++L+D G+ + CTQPRR+AA+
Sbjct: 618 EVKNGILQHLKEKDVLVVCGETGSGKTTQVPQFILDDMIDSGHGGYCNIICTQPRRIAAI 677
Query: 645 SVAKRVSEEM---DTELGDK-VGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDSDLDKYR 700
SVA+RV++E L D VGY +R E T + + T G+LLR+ D L+
Sbjct: 678 SVAQRVADERCESSPGLDDSLVGYQVRLESARSDKTRLLFCTTGILLRKLAGDRTLNDVT 737
Query: 701 VIVMDEAHERSLSTDVLFGILKKVVARR------RDFKLIVTSATLNAQKFSDFFGSVPI 754
I++DE HERSL D L ILK ++ ++ R K+I+ SAT++A FS +FG P+
Sbjct: 738 HIIVDEVHERSLLGDFLLIILKSLIEKQSCDNTSRKLKVILMSATVDADLFSRYFGHCPV 797
Query: 755 FHIPGRTFPVNT 766
GRT PV T
Sbjct: 798 ITAQGRTHPVTT 809
Score = 329 (120.9 bits), Expect = 1.6e-58, Sum P(5) = 1.6e-58
Identities = 100/342 (29%), Positives = 156/342 (45%)
Query: 774 EDYVEAAVKQAMTIHI--TSPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPEL 831
ED ++ + + + HI T G ILIF+ G EI + L ++ L +S P
Sbjct: 894 EDRIDYELLEELICHIDDTCEEGAILIFLPGVAEI----YML---LDMLAASYRFRGPAA 946
Query: 832 -LILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYN 890
+LP++S + + Q K+F + +G RK I ATNIAETS+T+D + YVID+G K YN
Sbjct: 947 DWLLPLHSSIASSEQRKVFLRPPKGLRKVIAATNIAETSITIDDVVYVIDSGKHKENRYN 1006
Query: 891 PKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLG 950
P+ + ++ +S C+ LYT + M P VPE+ R L
Sbjct: 1007 PQKKLSSMVEDWISQANARQRTGRAGRVKPGICFSLYTRYRFEKLMRPYQVPEMLRMPLV 1066
Query: 951 NVVXXXXXXXXXXXXXF--DFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFP 1008
+ F ++PP + + +++ L +GA+ LT LG + + P
Sbjct: 1067 ELCLQIKLLGLGHIKPFLSRALEPPSEGAMTSAISLLHEVGAVEGDEELTPLGHHLAKLP 1126
Query: 1009 LDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAAREKFFV------- 1061
+D + KMLL G GCL +L+I + LS S F PKD + D +
Sbjct: 1127 VDVLIGKMLLYGGIFGCLSPILSIAAFLSYKSPFIYPKDEKQNVDRVKLALLSDNGVSSS 1186
Query: 1062 ------QESDHLTLLYVYQQW-KEHQYRGDWCEEHYLHVKSL 1096
++SDHL ++ Y +W K Q RG + + K L
Sbjct: 1187 DLNNNDRQSDHLLMMVAYDKWVKILQERGMKAAQRFCESKFL 1228
Score = 73 (30.8 bits), Expect = 1.6e-58, Sum P(5) = 1.6e-58
Identities = 24/82 (29%), Positives = 40/82 (48%)
Query: 1062 QESDHLTLLYVYQQW-KEHQYRG-----DWCEEHYLHVKSLRKAREVRSQLLDILKTLK- 1114
++SDHL ++ Y +W K Q RG +CE +L +R R++R Q +L +
Sbjct: 1193 RQSDHLLMMVAYDKWVKILQERGMKAAQRFCESKFLSSSVMRMIRDMRVQFGTLLADIGL 1252
Query: 1115 IPLTSSGHDFDVVRKAICSAYF 1136
I L +G +F +K +F
Sbjct: 1253 INLPKTG-EFSGRKKENLDVWF 1273
Score = 58 (25.5 bits), Expect = 1.6e-58, Sum P(5) = 1.6e-58
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 1158 HLHPSSAIYGL-GYTPEYVVYHELILTTKEYMQCATAVEP 1196
H+HPSS + ++V+ E + T K Y++ T V P
Sbjct: 1338 HIHPSSINSNFKAFQNPFLVFLEKVETNKVYLRDTTIVSP 1377
Score = 49 (22.3 bits), Expect = 1.3e-27, Sum P(5) = 1.3e-27
Identities = 8/27 (29%), Positives = 17/27 (62%)
Query: 760 RTFPVNTLYSKTPCEDYVEAAVKQAMT 786
+T +N +Y K CE +V+ ++ A++
Sbjct: 71 KTKKLNNVYEKLSCEGFVDDQIELALS 97
Score = 38 (18.4 bits), Expect = 1.6e-58, Sum P(5) = 1.6e-58
Identities = 14/46 (30%), Positives = 20/46 (43%)
Query: 391 QKKEVELAKRLVRKDGSRMSLAQSKKLSQITADNHQWEERQLLRSG 436
QK+ + A + + KL QI+A+N R LL SG
Sbjct: 8 QKQSNKAASSSSSSKSNYQKPSSGPKL-QISAENEDRLRRLLLNSG 52
Score = 38 (18.4 bits), Expect = 1.7e-26, Sum P(5) = 1.7e-26
Identities = 16/55 (29%), Positives = 26/55 (47%)
Query: 610 TGSGKTTQLTQYLLEDGYTT-NGIVGCTQPRRVAAMSVAKRVSEEMDTELGDKVG 663
T G+T +T + LE+ Y + N ++ P AA+ DT + DK+G
Sbjct: 799 TAQGRTHPVTTHFLEEIYESINYLLAPDSP---AAL--------RSDTSIKDKLG 842
>FB|FBgn0002774 [details] [associations]
symbol:mle "maleless" species:7227 "Drosophila melanogaster"
[GO:0005700 "polytene chromosome" evidence=IDA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;TAS] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0000785 "chromatin"
evidence=IDA] [GO:0007549 "dosage compensation"
evidence=NAS;IMP;TAS] [GO:0009047 "dosage compensation by
hyperactivation of X chromosome" evidence=NAS] [GO:0045433 "male
courtship behavior, veined wing generated song production"
evidence=IGI] [GO:0016456 "X chromosome located dosage compensation
complex, transcription activating" evidence=NAS;TAS] [GO:0005694
"chromosome" evidence=NAS] [GO:0005634 "nucleus" evidence=IDA;NAS]
[GO:0003725 "double-stranded RNA binding" evidence=IEA;ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0016457 "dosage
compensation complex assembly involved in dosage compensation by
hyperactivation of X chromosome" evidence=TAS] [GO:0003724 "RNA
helicase activity" evidence=NAS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0048675 "axon extension" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0000805 "X chromosome" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0005665 "DNA-directed RNA polymerase II, core
complex" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001159 InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137
PROSITE:PS51194 SMART:SM00358 SMART:SM00490 SMART:SM00847
InterPro:IPR014720 EMBL:AE013599 GO:GO:0005524 GO:GO:0008340
Gene3D:3.30.160.20 GO:GO:0045944 GO:GO:0000785 GO:GO:0003682
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0045433 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0048675 GO:GO:0003724
GeneTree:ENSGT00550000074257 KO:K13184 OMA:DDWIRLQ GO:GO:0016456
EMBL:M74121 EMBL:BT003785 EMBL:BT010267 PIR:B40025
RefSeq:NP_476641.1 RefSeq:NP_724440.1 UniGene:Dm.2901
ProteinModelPortal:P24785 SMR:P24785 IntAct:P24785 MINT:MINT-768581
STRING:P24785 PaxDb:P24785 PRIDE:P24785 EnsemblMetazoa:FBtr0086031
GeneID:35523 KEGG:dme:Dmel_CG11680 CTD:35523 FlyBase:FBgn0002774
InParanoid:P24785 OrthoDB:EOG47H44V PhylomeDB:P24785
GenomeRNAi:35523 NextBio:793836 Bgee:P24785 GermOnline:CG11680
GO:GO:0016457 Uniprot:P24785
Length = 1293
Score = 375 (137.1 bits), Expect = 1.8e-58, Sum P(3) = 1.8e-58
Identities = 87/209 (41%), Positives = 127/209 (60%)
Query: 580 EQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNGIVG----- 634
E R+ LPI ++R E+L I +N G TG GKTTQ+ QY+L+D Y +G G
Sbjct: 379 EFREKLPIAAMRSEILTAINDNPVVIIRGNTGCGKTTQIAQYILDD-YICSGQGGYANIY 437
Query: 635 CTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDV-TGPSTLIKYMTDGVLLRETLKD 693
TQPRR++A+SVA+RV+ E +LGD VGY++RFE V P I + T GVLLR+ +
Sbjct: 438 VTQPRRISAISVAERVARERCEQLGDTVGYSVRFESVFPRPYGAILFCTVGVLLRKL--E 495
Query: 694 SDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVP 753
+ L I++DE HER +++D L IL+ +V D +I+ SAT++ KFS +FG P
Sbjct: 496 AGLRGVSHIIVDEIHERDVNSDFLLVILRDMVDTYPDLHVILMSATIDTTKFSKYFGICP 555
Query: 754 IFHIPGRTFPVNTLYSKTPCE--DYVEAA 780
+ +PGR FPV + + + D+V +A
Sbjct: 556 VLEVPGRAFPVQQFFLEDIIQMTDFVPSA 584
Score = 327 (120.2 bits), Expect = 1.8e-58, Sum P(3) = 1.8e-58
Identities = 96/354 (27%), Positives = 163/354 (46%)
Query: 774 EDYVEAAVKQAMTIHITSP--PGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPEL 831
E V + +A+ +HI S PG IL+F+ G + I FAL + ++ ++ + +
Sbjct: 632 ESDVSFELLEALLMHIKSKNIPGAILVFLPGWNLI----FALMKFLQN--TNIFGDTSQY 685
Query: 832 LILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNP 891
ILP +SQ+P D Q K+FE EG K I++TNIAETS+T+D I +VID +MK++
Sbjct: 686 QILPCHSQIPRDEQRKVFEPVPEGVTKIILSTNIAETSITIDDIVFVIDICKARMKLFTS 745
Query: 892 KMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGN 951
+ + S C+ L + + + + + PE+ RT L
Sbjct: 746 HNNLTSYATVWASKTNLEQRKGRAGRVRPGFCFTLCSRARF-QALEDNLTPEMFRTPLHE 804
Query: 952 VVXXXXXXXXXXXXXF--DFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPL 1009
+ F ++PPP + ++ + L + L+ LT LG + P+
Sbjct: 805 MALTIKLLRLGSIHHFLSKALEPPPVDAVIEAEVLLREMRCLDANDELTPLGRLLARLPI 864
Query: 1010 DPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAAREKFF--VQESDHL 1067
+P L KM+++G GC D + + S S S F D + A +K + SDH+
Sbjct: 865 EPRLGKMMVLGAVFGCADLMAIMASYSSTFSEVFS-LDIGQRRLANHQKALSGTKCSDHV 923
Query: 1068 TLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAR-----EVRSQLLDILKTLKIP 1116
++ Q W+ + RG+ E + K L+ + + + QLLD+L+ P
Sbjct: 924 AMIVASQMWRREKQRGEHMEARFCDWKGLQMSTMNVIWDAKQQLLDLLQQAGFP 977
Score = 47 (21.6 bits), Expect = 1.8e-58, Sum P(3) = 1.8e-58
Identities = 15/57 (26%), Positives = 21/57 (36%)
Query: 237 GRWEWEDTPRREGYSNSSKRYQPSPSPMFVGASPDARLVSPLSTPRSNGYAASPWDH 293
G+ D P G S R + M G+ R+ S P+ G A P +H
Sbjct: 72 GKLNTNDVPADAGASGGGPRTGLEGAGMAGGSGQQKRVFDGQSGPQDLGEAYRPLNH 128
Score = 43 (20.2 bits), Expect = 4.7e-58, Sum P(3) = 4.7e-58
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 507 KQTQNKSRQRFWELAGSQMGNILGVKKTAEQVDAD 541
+QT K+RQRF + +GV + + DA+
Sbjct: 23 RQTGPKNRQRFLCEVRVEPNTYIGVGNSTNKKDAE 57
Score = 38 (18.4 bits), Expect = 2.3e-28, Sum P(3) = 2.3e-28
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 803 QDEIEAACFALKERMEQLISSTTREVPELLILPI-YSQL 840
+ E+ A ALK +E LI+ ++L L Y+QL
Sbjct: 1101 EPELAAKIGALKPALEDLITVACDNPSDILRLEEPYAQL 1139
Score = 37 (18.1 bits), Expect = 4.3e-23, Sum P(3) = 4.3e-23
Identities = 8/36 (22%), Positives = 20/36 (55%)
Query: 380 SSFILGDDASYQKKEVELAKRLVRKDGSRMSLAQSK 415
+ F+ ++ ++KEVE ++L+ +D + +K
Sbjct: 578 TDFVPSAESRRKRKEVEDEEQLLSEDKDEAEINYNK 613
>CGD|CAL0005664 [details] [associations]
symbol:orf19.6818 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908 PROSITE:PS51194
SMART:SM00490 SMART:SM00591 SMART:SM00847 CGD:CAL0005664
GO:GO:0005524 GO:GO:0003676 Gene3D:3.10.110.10 InterPro:IPR016135
SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
EMBL:AACQ01000029 EMBL:AACQ01000028 RefSeq:XP_719795.1
RefSeq:XP_719912.1 ProteinModelPortal:Q5ADM3 GeneID:3638543
GeneID:3638643 KEGG:cal:CaO19.14110 KEGG:cal:CaO19.6818
Uniprot:Q5ADM3
Length = 1370
Score = 363 (132.8 bits), Expect = 7.0e-58, Sum P(2) = 7.0e-58
Identities = 101/293 (34%), Positives = 155/293 (52%)
Query: 499 ALVREIREKQTQNKSR---QRFWELAGSQMGNIL---GVKKTAEQVDADTAVVGEQG-EI 551
A+VRE+ + T + + +E + I+ G T E+V VV ++G +
Sbjct: 475 AIVRELLKYLTDHIGQCMIYTIFEWLNDHVNKIIENPGPLMTTEKV-TKKVVVSQKGNKK 533
Query: 552 DFREDAKFSQHMKKGEAVSDFAKS-------KTLAEQRQYLPIFSVRDELLQVIRENQXX 604
D + F K E V + K K + QR LP F+ ++ L+ I Q
Sbjct: 534 DHNKSVTFISD-KDIELVKESYKKRKHSDEFKEMLIQRSKLPAFAKQESLMTAINSGQVT 592
Query: 605 XXXGETGSGKTTQLTQYLLEDGYT----TNGIVGCTQPRRVAAMSVAKRVSEEMDTELGD 660
GETGSGK+TQ+ Q++++D Y+ T I+ CTQPRR++A+S+A R+S+E E+G
Sbjct: 593 LITGETGSGKSTQVVQFIMDDLYSKGDFTTKII-CTQPRRLSAVSLADRISKERVDEVGS 651
Query: 661 KVGYAIRFEDVTGPSTLIKYMTDGVLLR---ETLKDSDLDKYRVIVMDEAHERSLSTDVL 717
+ GY IR E+ T +T I + T GVLLR + K+ L I++DE HERS+ D L
Sbjct: 652 ETGYIIRGENKTSSNTRITFATTGVLLRMLQSSKKNGVLKNIGYILIDEVHERSVDADFL 711
Query: 718 FGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPI--FHIPGRTFPVNTLY 768
+LKK++ K+I+ SAT++ F +FF P+ HI GRT+P+ Y
Sbjct: 712 LILLKKMIKSMPKLKIILLSATISVDTFINFFEK-PLTPLHIEGRTYPIQDFY 763
Score = 330 (121.2 bits), Expect = 7.0e-58, Sum P(2) = 7.0e-58
Identities = 100/359 (27%), Positives = 169/359 (47%)
Query: 794 GDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAK 853
G ILIF+ G EI + +KE I+ ++ + + LP++S L + Q IF+ A
Sbjct: 821 GSILIFLPGVLEISST---IKE-----INKSSDN--KFMALPLHSGLTSAEQKSIFKTAP 870
Query: 854 EGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXX 913
+G RK +V+TNIAETS+T+ VIDTG K ++ K+ L S
Sbjct: 871 KGKRKVVVSTNIAETSITIPDCVAVIDTGKSKNLFFDHKLNTTKLIESWCSQAEVRQRRG 930
Query: 914 XXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXF--DFMD 971
CY LYT+ + M P+PEI+RT L N+ F +D
Sbjct: 931 RAGRVTAGTCYHLYTKETF-EAMQKQPIPEIKRTRLENLYLVVKSMGISNVNEFLSSGLD 989
Query: 972 PPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLT 1031
P + ++ + L +GAL +LT LG + P DP AK+L++G GCLD LT
Sbjct: 990 APDKSSLDKANQFLHEIGALQE-NSLTKLGNYISYLPTDPQSAKLLILGCIFGCLDICLT 1048
Query: 1032 IVSMLSVPSVFFRPKDRAEESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYL 1091
+ ++ S S F ++ ++ ++KF + D +++ Y + ++ + + E+YL
Sbjct: 1049 LAAISSTGSPFINSYEQRDKLKQIQKKFGNGQGDFISMANAYNAYMSNKSKR-FLTENYL 1107
Query: 1092 HVKSLRKAREVRSQLLDILKTL-----KIP--LTSSGHDFDVVRKAICSAYFHNAARLK 1143
+++ RSQ L +L L K+ + ++ ++R I A++ AR++
Sbjct: 1108 SYTTIKDITSTRSQYLSLLVELGFVNRKLDDSCNKNAENWPLIRGIIAGAFYPQVARIQ 1166
Score = 43 (20.2 bits), Expect = 3.4e-24, Sum P(2) = 3.4e-24
Identities = 37/157 (23%), Positives = 60/157 (38%)
Query: 484 KDPTSDMAIISRKGSALVREIREKQTQNKSRQRFWELAGSQMGNILGVKK-----TAEQV 538
KD + IS K LV+E +K+ K F E+ Q + K TA
Sbjct: 533 KDHNKSVTFISDKDIELVKESYKKR---KHSDEFKEML-IQRSKLPAFAKQESLMTAINS 588
Query: 539 DADTAVVGEQGEIDFREDAKFSQHMKKGEAVSDFAKSKTLAEQRQYLPIFSVRDELLQVI 598
T + GE G + +F M + DF +K + Q + L S+ D + +
Sbjct: 589 GQVTLITGETGSGKSTQVVQFI--MDDLYSKGDFT-TKIICTQPRRLSAVSLADRISKE- 644
Query: 599 RENQXXXXXGET--GSGKTTQLTQYLLEDGYTTNGIV 633
R ++ G G KT+ T+ + T G++
Sbjct: 645 RVDEVGSETGYIIRGENKTSSNTRIT----FATTGVL 677
>UNIPROTKB|Q5ADM3 [details] [associations]
symbol:CaO19.14110 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908 PROSITE:PS51194
SMART:SM00490 SMART:SM00591 SMART:SM00847 CGD:CAL0005664
GO:GO:0005524 GO:GO:0003676 Gene3D:3.10.110.10 InterPro:IPR016135
SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
EMBL:AACQ01000029 EMBL:AACQ01000028 RefSeq:XP_719795.1
RefSeq:XP_719912.1 ProteinModelPortal:Q5ADM3 GeneID:3638543
GeneID:3638643 KEGG:cal:CaO19.14110 KEGG:cal:CaO19.6818
Uniprot:Q5ADM3
Length = 1370
Score = 363 (132.8 bits), Expect = 7.0e-58, Sum P(2) = 7.0e-58
Identities = 101/293 (34%), Positives = 155/293 (52%)
Query: 499 ALVREIREKQTQNKSR---QRFWELAGSQMGNIL---GVKKTAEQVDADTAVVGEQG-EI 551
A+VRE+ + T + + +E + I+ G T E+V VV ++G +
Sbjct: 475 AIVRELLKYLTDHIGQCMIYTIFEWLNDHVNKIIENPGPLMTTEKV-TKKVVVSQKGNKK 533
Query: 552 DFREDAKFSQHMKKGEAVSDFAKS-------KTLAEQRQYLPIFSVRDELLQVIRENQXX 604
D + F K E V + K K + QR LP F+ ++ L+ I Q
Sbjct: 534 DHNKSVTFISD-KDIELVKESYKKRKHSDEFKEMLIQRSKLPAFAKQESLMTAINSGQVT 592
Query: 605 XXXGETGSGKTTQLTQYLLEDGYT----TNGIVGCTQPRRVAAMSVAKRVSEEMDTELGD 660
GETGSGK+TQ+ Q++++D Y+ T I+ CTQPRR++A+S+A R+S+E E+G
Sbjct: 593 LITGETGSGKSTQVVQFIMDDLYSKGDFTTKII-CTQPRRLSAVSLADRISKERVDEVGS 651
Query: 661 KVGYAIRFEDVTGPSTLIKYMTDGVLLR---ETLKDSDLDKYRVIVMDEAHERSLSTDVL 717
+ GY IR E+ T +T I + T GVLLR + K+ L I++DE HERS+ D L
Sbjct: 652 ETGYIIRGENKTSSNTRITFATTGVLLRMLQSSKKNGVLKNIGYILIDEVHERSVDADFL 711
Query: 718 FGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPI--FHIPGRTFPVNTLY 768
+LKK++ K+I+ SAT++ F +FF P+ HI GRT+P+ Y
Sbjct: 712 LILLKKMIKSMPKLKIILLSATISVDTFINFFEK-PLTPLHIEGRTYPIQDFY 763
Score = 330 (121.2 bits), Expect = 7.0e-58, Sum P(2) = 7.0e-58
Identities = 100/359 (27%), Positives = 169/359 (47%)
Query: 794 GDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAK 853
G ILIF+ G EI + +KE I+ ++ + + LP++S L + Q IF+ A
Sbjct: 821 GSILIFLPGVLEISST---IKE-----INKSSDN--KFMALPLHSGLTSAEQKSIFKTAP 870
Query: 854 EGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXX 913
+G RK +V+TNIAETS+T+ VIDTG K ++ K+ L S
Sbjct: 871 KGKRKVVVSTNIAETSITIPDCVAVIDTGKSKNLFFDHKLNTTKLIESWCSQAEVRQRRG 930
Query: 914 XXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXF--DFMD 971
CY LYT+ + M P+PEI+RT L N+ F +D
Sbjct: 931 RAGRVTAGTCYHLYTKETF-EAMQKQPIPEIKRTRLENLYLVVKSMGISNVNEFLSSGLD 989
Query: 972 PPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLT 1031
P + ++ + L +GAL +LT LG + P DP AK+L++G GCLD LT
Sbjct: 990 APDKSSLDKANQFLHEIGALQE-NSLTKLGNYISYLPTDPQSAKLLILGCIFGCLDICLT 1048
Query: 1032 IVSMLSVPSVFFRPKDRAEESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGDWCEEHYL 1091
+ ++ S S F ++ ++ ++KF + D +++ Y + ++ + + E+YL
Sbjct: 1049 LAAISSTGSPFINSYEQRDKLKQIQKKFGNGQGDFISMANAYNAYMSNKSKR-FLTENYL 1107
Query: 1092 HVKSLRKAREVRSQLLDILKTL-----KIP--LTSSGHDFDVVRKAICSAYFHNAARLK 1143
+++ RSQ L +L L K+ + ++ ++R I A++ AR++
Sbjct: 1108 SYTTIKDITSTRSQYLSLLVELGFVNRKLDDSCNKNAENWPLIRGIIAGAFYPQVARIQ 1166
Score = 43 (20.2 bits), Expect = 3.4e-24, Sum P(2) = 3.4e-24
Identities = 37/157 (23%), Positives = 60/157 (38%)
Query: 484 KDPTSDMAIISRKGSALVREIREKQTQNKSRQRFWELAGSQMGNILGVKK-----TAEQV 538
KD + IS K LV+E +K+ K F E+ Q + K TA
Sbjct: 533 KDHNKSVTFISDKDIELVKESYKKR---KHSDEFKEML-IQRSKLPAFAKQESLMTAINS 588
Query: 539 DADTAVVGEQGEIDFREDAKFSQHMKKGEAVSDFAKSKTLAEQRQYLPIFSVRDELLQVI 598
T + GE G + +F M + DF +K + Q + L S+ D + +
Sbjct: 589 GQVTLITGETGSGKSTQVVQFI--MDDLYSKGDFT-TKIICTQPRRLSAVSLADRISKE- 644
Query: 599 RENQXXXXXGET--GSGKTTQLTQYLLEDGYTTNGIV 633
R ++ G G KT+ T+ + T G++
Sbjct: 645 RVDEVGSETGYIIRGENKTSSNTRIT----FATTGVL 677
>TIGR_CMR|CPS_2243 [details] [associations]
symbol:CPS_2243 "ATP-dependent helicase HrpA"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004386
"helicase activity" evidence=ISS] [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR010222 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578 OMA:TYQFEPG
InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:YP_268968.1 ProteinModelPortal:Q482P9 STRING:Q482P9
GeneID:3518699 KEGG:cps:CPS_2243 PATRIC:21467591
BioCyc:CPSY167879:GI48-2313-MONOMER Uniprot:Q482P9
Length = 1375
Score = 612 (220.5 bits), Expect = 2.2e-57, Sum P(2) = 2.2e-57
Identities = 148/417 (35%), Positives = 219/417 (52%)
Query: 585 LPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNGIVGCTQPRRVAAM 644
LPI ++ I NQ GETGSGKTTQ+ + LE G +G++G TQPRR+AA
Sbjct: 99 LPISENAAQISAAIDANQVVIIAGETGSGKTTQIPKICLELGRGVDGLIGHTQPRRIAAR 158
Query: 645 SVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDSDLDKYRVIVM 704
+VA R++EE+ T+LG++VGY +RF D + IK MTDG+LL E +D L KY I++
Sbjct: 159 TVANRIAEELGTKLGEQVGYKVRFNDQVSEQSYIKLMTDGILLAEMQRDRLLLKYDTIII 218
Query: 705 DEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGS-----VPIFHIPG 759
DEAHERSL+ D + G LK+++ +R D KLI+TSAT++ Q+F+ F S PI + G
Sbjct: 219 DEAHERSLNIDFILGYLKQILIKRPDLKLIITSATIDPQRFAKHFSSKNGLPAPIIEVSG 278
Query: 760 RTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMT--GQDEIEAACFALKERM 817
RTFPV Y ++ + + I S + ++ G +I +E
Sbjct: 279 RTFPVEMRYRPLNDRAVIDDDDQSPQEVDIISGILSAVDELSDCGNGDILVFLNGEREIR 338
Query: 818 EQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFY 877
+ + + +LP+Y++L Q +IF K G R ++ATN+AETSLTV GI Y
Sbjct: 339 DTAAALVKANLRHTNVLPLYARLTVSEQNQIF-KPHSG-RNIVLATNVAETSLTVPGIKY 396
Query: 878 VIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEML 937
VID G ++ Y+ + + L + PVS C RLY+E Y +
Sbjct: 397 VIDPGTARISRYSYRTKVQRLPIEPVSQASANQRSGRCGRVSEGICIRLYSEDDYKSRAE 456
Query: 938 PSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNV 994
+ PEI RTNL V+ F F++ P NI + + L + A+ ++
Sbjct: 457 FTD-PEILRTNLATVILQMHALDLGDIANFPFVEAPDNRNITDGVRLLEEIAAVESI 512
Score = 400 (145.9 bits), Expect = 3.1e-34, Sum P(2) = 3.1e-34
Identities = 128/420 (30%), Positives = 199/420 (47%)
Query: 742 AQKFSDFFG-SVPIFHIPGRTFPVNTLY------------SKTPCEDYVEAAVKQAMTIH 788
A+ FS G PI + GRTFPV Y ++P E + + + A+
Sbjct: 260 AKHFSSKNGLPAPIIEVSGRTFPVEMRYRPLNDRAVIDDDDQSPQEVDIISGILSAVDEL 319
Query: 789 ITSPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKI 848
GDIL+F+ G+ EI AL + + R +LP+Y++L Q +I
Sbjct: 320 SDCGNGDILVFLNGEREIRDTAAAL-------VKANLRHTN---VLPLYARLTVSEQNQI 369
Query: 849 FEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXX 908
F K G R ++ATN+AETSLTV GI YVID G ++ Y+ + + L + PVS
Sbjct: 370 F-KPHSG-RNIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPVSQASA 427
Query: 909 XXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFD 968
C RLY+E Y + + PEI RTNL V+ F
Sbjct: 428 NQRSGRCGRVSEGICIRLYSEDDYKSRAEFTD-PEILRTNLATVILQMHALDLGDIANFP 486
Query: 969 FMDPPPQENILNSMYQLWVLGALNNV--------GA-------LTDLGWKMVEFPLDPPL 1013
F++ P NI + + L + A+ ++ G LT G + +FP+DP L
Sbjct: 487 FVEAPDNRNITDGVRLLEEIAAVESIENADKNAKGKASSTATQLTKSGRLLAKFPIDPRL 546
Query: 1014 AKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAAREKFFVQESDHLTLL--- 1070
AKM++ + GC++++L IVS LS+ RP ++ + SD +F + SD ++LL
Sbjct: 547 AKMVVSSIEFGCIEQILIIVSALSIQDPRERPHEKQQLSDEKHNRFKDKSSDFISLLNLW 606
Query: 1071 -YVYQQWKE---HQYRGDWCEEHYLHVKSLRKAREVRSQLLDILKTLKIPLTSSGHDFDV 1126
Y+ +Q K+ +Q+R C+ +L LR+ +++ SQL LK +I LTS + F +
Sbjct: 607 QYINEQKKDLTQNQFR-KLCQREFLSYVRLREWQDIFSQLKLTLKEQQITLTSIDYQFSM 665
Score = 67 (28.6 bits), Expect = 2.2e-57, Sum P(2) = 2.2e-57
Identities = 19/76 (25%), Positives = 37/76 (48%)
Query: 1127 VRKAICSAYFHNAARLKGVGEYINCRNGMPCHLHPSSAIYGLGYTPEYVVYHELILTTKE 1186
V +A+ S + + EY R GM + P SA+ +P++++ EL+ T++
Sbjct: 693 VHQALLSGLLSHIGQQDENREYKGAR-GMKFFIFPGSAL--TKKSPKWLMSAELVETSRL 749
Query: 1187 YMQCATAVEPQWLSEL 1202
+ + ++P WL L
Sbjct: 750 FARMNAKIDPLWLEPL 765
>TAIR|locus:2009200 [details] [associations]
symbol:NIH "nuclear DEIH-boxhelicase" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003678
"DNA helicase activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006259 "DNA metabolic process" evidence=ISS]
InterPro:IPR002110 InterPro:IPR001374 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF01424 Pfam:PF04408 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 PROSITE:PS50297
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0008026 IPI:IPI00521146 RefSeq:NP_172152.1 UniGene:At.20810
PRIDE:F4IDQ6 EnsemblPlants:AT1G06670.1 GeneID:837177
KEGG:ath:AT1G06670 OMA:GNMEENT Uniprot:F4IDQ6
Length = 1576
Score = 357 (130.7 bits), Expect = 2.3e-57, Sum P(2) = 2.3e-57
Identities = 82/239 (34%), Positives = 132/239 (55%)
Query: 542 TAVVGEQGEIDFREDAKFSQHMKKGEAVSDFAKSKT------LAEQRQYLPIFSVRDELL 595
T V + DF + ++H + VS ++ K + E R LPI S RD ++
Sbjct: 168 TGNVNSNWKDDFFKKPHMTKHDIENNVVSLSSRLKKERHFREIFEARSKLPIASFRDAII 227
Query: 596 QVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNGI---VGCTQPRRVAAMSVAKRVSE 652
+ NQ GETG GKTTQ+ QYLL+ + + + CTQPRR++A+SV+ R+S
Sbjct: 228 SAVESNQVVLIAGETGCGKTTQVPQYLLDHMWHSKKEACKIICTQPRRISAISVSDRISW 287
Query: 653 EMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLK---DSDLDKYRVIVMDEAHE 709
E +G VGY +R + G + + + T+G+LLR + +S + I++DE HE
Sbjct: 288 ERGETIGRTVGYKVRLQSEGGRESSVVFCTNGILLRVLIGKGVNSSVPDITHIIVDEIHE 347
Query: 710 RSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPIFHIPGRTFPVNTLY 768
R +D + IL+ ++ +LI+ SATL+A++FS++FG P+ +PG T+PV T +
Sbjct: 348 RDSYSDFMLMILRDLLPSNPHLRLILMSATLDAERFSEYFGGCPVVRVPGFTYPVRTFF 406
Score = 333 (122.3 bits), Expect = 2.3e-57, Sum P(2) = 2.3e-57
Identities = 109/390 (27%), Positives = 178/390 (45%)
Query: 772 PCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPEL 831
P E V VK I S G IL+F+ G +EI KE++ L +
Sbjct: 554 PEEVDVGLIVKLMKKICSDSKDGAILVFLPGWEEISKT----KEKL--LDDRFFAHSAKF 607
Query: 832 LILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNP 891
+IL ++S++PA+ Q K+F + G RK ++ATNIAE+++T+D + YVID+G K K Y+P
Sbjct: 608 IILCLHSRVPAEEQKKVFNRPPRGCRKIVLATNIAESAVTIDDVVYVIDSGRMKEKSYDP 667
Query: 892 KMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPS-PVPEIQRTNLG 950
+ LQ VS CY LY++ + LP VPE+ R +
Sbjct: 668 YNDVSTLQSSWVSKANAKQRAGRAGRCQAGICYHLYSKLRAAS--LPEYRVPEVMRMPVD 725
Query: 951 NVVXXXXXXXXXXXXXFDF----MDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVE 1006
+ DF MDPP ++I N++ L +GAL LT+LG K +
Sbjct: 726 ELCLQVKMLDPNCNVN-DFLQKLMDPPVAQSIENALIILKDIGALTPEEELTELGQKFGQ 784
Query: 1007 FPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVF---FRPKDRAEESDAARE--KFFV 1061
P+ P ++KM+ + CLD L + F P DR + + A E +
Sbjct: 785 LPVHPRISKMIYFAILVNCLDPALILACAADEKDPFTMPLSPGDRKKAAAAKHELASLYG 844
Query: 1062 QESDHLTLLYVYQQWKEHQYRG---DWCEEHYLHVKSLRKAREVRSQLL-DILKTLKIPL 1117
SDHL + +Q WK + G ++C ++++ +++ ++ +L ++ + IP
Sbjct: 845 DHSDHLATVAAFQCWKNAKASGQAKEFCSKYFISQVVMKRLDDLCRKLQGELNRHGVIPS 904
Query: 1118 TSSG-----HDFDVVRKAICSAYFHNAARL 1142
+SS HD ++R I + R+
Sbjct: 905 SSSNCSLNAHDPGILRAVIAVGLYPMLGRM 934
Score = 43 (20.2 bits), Expect = 2.4e-24, Sum P(2) = 2.4e-24
Identities = 12/40 (30%), Positives = 22/40 (55%)
Query: 488 SDMAIISRKGSALVREIREKQTQNKSRQRFWELAGSQMGN 527
+D + S++G + E+ EK+ Q ++ Q E AG+ N
Sbjct: 499 ADCTLKSKEGITAL-ELAEKENQFETAQIIREHAGNIQSN 537
>UNIPROTKB|G4MZR9 [details] [associations]
symbol:MGG_07059 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp22" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR009060 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00591 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR015940 SMART:SM00165 Gene3D:3.10.110.10
InterPro:IPR016135 SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:CM001232 SUPFAM:SSF46934 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 RefSeq:XP_003715240.1
ProteinModelPortal:G4MZR9 EnsemblFungi:MGG_07059T0 GeneID:2682944
KEGG:mgr:MGG_07059 Uniprot:G4MZR9
Length = 1404
Score = 382 (139.5 bits), Expect = 1.9e-56, Sum P(3) = 1.9e-56
Identities = 90/206 (43%), Positives = 129/206 (62%)
Query: 581 QRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLED------GYTTNGIVG 634
QRQ LP + +RDE+++ + E+Q GETGSGK+TQ Q++L+D G+ N +V
Sbjct: 629 QRQKLPAWLLRDEIVRTVAEHQVTIIAGETGSGKSTQSVQFILDDLYGRGLGHAANILV- 687
Query: 635 CTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRET---- 690
TQPRR++A+ +A RVS+E +++G +VGY IR E TGP T I ++T GVLLR
Sbjct: 688 -TQPRRISALGLADRVSDERCSQVGQEVGYIIRGESRTGPKTRITFVTTGVLLRRLQVSG 746
Query: 691 --LKD--SDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFS 746
++D + L +V+DE HERSL TD L I++ V+ +RRD KL++ SATL++ F+
Sbjct: 747 GRVEDVVASLADVSHVVIDEVHERSLDTDFLLSIIRDVLKQRRDLKLVLMSATLDSATFA 806
Query: 747 DFF---G-SVPIFHIPGRTFPVNTLY 768
+F G V I GRTFPV Y
Sbjct: 807 SYFVQDGIRVGQVEIAGRTFPVTDYY 832
Score = 309 (113.8 bits), Expect = 1.9e-56, Sum P(3) = 1.9e-56
Identities = 93/338 (27%), Positives = 149/338 (44%)
Query: 787 IHITSPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQA 846
+ + G ILIF+ G EI AC L R + L +LP+++ L Q
Sbjct: 881 LSLAQKSGGILIFLPGVAEINRACGML------------RSLNCLHVLPLHASLETKEQR 928
Query: 847 KIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXX 906
K+F G RK +VATN+AETS+T+D I V+DTG K Y+ M L+ S
Sbjct: 929 KVFVPPPSGKRKVVVATNVAETSITIDDIIVVVDTGKVKETSYDAANNMRRLEETFASLA 988
Query: 907 XXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXX 966
CY+LYT ++M P PE++R L +
Sbjct: 989 ACKQRRGRAGRVQAGECYKLYTRKLE-SQMAERPEPEMRRVPLEQLCLSVRAMGIADVRG 1047
Query: 967 FDFMDPPPQEN--ILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLG 1024
F P P E + ++ L +G L+ LT LG ++ P D K+++ G G
Sbjct: 1048 FLARAPTPPEAAAVEGAITMLRRMGCLDGE-ELTALGRQLAAIPADLRCGKLMVYGAVFG 1106
Query: 1025 CLDEVLTIVSMLSVP-SVFFRPKDRAEESDAAREKFFVQESDHLTLLYVYQQWK------ 1077
CL++ +++ ++LS VF P D+ +++ AR +F + D LT L +Q W
Sbjct: 1107 CLEDCVSVAALLSSGRGVFVSPPDKRDQAREARARFAAGDGDLLTDLRAFQAWDAMMRDP 1166
Query: 1078 --EHQYRGDWCEEHYLHVKSLRKAREVRSQLLDILKTL 1113
+ ++ +C++++L +L R+Q L L
Sbjct: 1167 SVQQRHVRSFCDDNFLSYLTLSDVASARTQYFTSLVEL 1204
Score = 57 (25.1 bits), Expect = 2.2e-23, Sum P(2) = 2.2e-23
Identities = 24/79 (30%), Positives = 33/79 (41%)
Query: 618 LTQYLLEDGYTTNGIVGCTQPRRVAAMSVAKRVSEE-MDTELGDKVGYAIRFEDVTGPST 676
L ++ L + YT VG T RR A+ KR+S+ EL KV F+D G
Sbjct: 366 LPRWALPESYTAGVTVGATDLRREGAI---KRLSQSGYSAELCKKV-----FDDNNGDEG 417
Query: 677 LIKYMTDGVLLRETLKDSD 695
+ +LL D D
Sbjct: 418 RAAEVLQEILLTSGAVDGD 436
Score = 40 (19.1 bits), Expect = 1.9e-56, Sum P(3) = 1.9e-56
Identities = 15/41 (36%), Positives = 23/41 (56%)
Query: 534 TAEQVDADTAVVGEQGEID----FRE-DAKFSQHMKKGEAV 569
T+ VD D A G+Q E D +RE D +++ M+ E+V
Sbjct: 429 TSGAVDGDAANGGKQTEDDALESWREPDEIWTEEMESLESV 469
Score = 38 (18.4 bits), Expect = 2.1e-20, Sum P(3) = 2.1e-20
Identities = 17/58 (29%), Positives = 25/58 (43%)
Query: 612 SGKTTQLTQYLLEDGYTTNGIVGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFE 669
+G+T +T Y L+D G T R A VAK + LG ++ Y + E
Sbjct: 822 AGRTFPVTDYYLDDVIRMTQF-G-TANIRADADPVAKAIQN-----LGTRINYNLLVE 872
>UNIPROTKB|J3KSW6 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR002464
InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00690 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 HGNC:HGNC:18018 ChiTaRS:DHX40 EMBL:AC091271
EMBL:AC004167 Ensembl:ENST00000580030 Uniprot:J3KSW6
Length = 268
Score = 572 (206.4 bits), Expect = 2.3e-54, P = 2.3e-54
Identities = 117/233 (50%), Positives = 157/233 (67%)
Query: 586 PIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNGIVGCTQPRRVAAMS 645
PI R +++Q +R+N G TGSGKTTQL +YL E G++ +G++G TQPR+VAA+S
Sbjct: 34 PIQKQRKKIIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAAIS 93
Query: 646 VAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDSDLDKYRVIVMD 705
VA+RV+EEM LG KVGY +RF+D + T IKYMTDG LL+ L D +L K+ VI++D
Sbjct: 94 VAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVIILD 153
Query: 706 EAHERSLSTDVLFGILKKVVA-----RRRDFKLIVTSATLNAQKFSDFFGSVPIFHIPGR 760
EAHER+L+TD+LFG+LKK+ R+ K++V SAT+ K S FFG+ PIF IPGR
Sbjct: 154 EAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGR 213
Query: 761 TFPVN----TLYSKTPCED--YVEAAVKQAMTIHITSPPGDILIFMTGQDEIE 807
+PV L E+ Y++A VK M IH+ GDIL+F+TGQ EIE
Sbjct: 214 LYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIE 266
>ASPGD|ASPL0000008624 [details] [associations]
symbol:AN5839 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005829 "cytosol"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:BN001301 EMBL:AACD01000100
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
GO:GO:0008026 OrthoDB:EOG4TXG12 RefSeq:XP_663443.1
EnsemblFungi:CADANIAT00007203 GeneID:2870747 KEGG:ani:AN5839.2
HOGENOM:HOG000213693 OMA:KNIRRAI Uniprot:Q5B0U1
Length = 1436
Score = 373 (136.4 bits), Expect = 1.2e-53, Sum P(4) = 1.2e-53
Identities = 74/205 (36%), Positives = 126/205 (61%)
Query: 578 LAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNGI--VGC 635
+ + R LPI++ ++E+L + ++ ETGSGK+TQ+ ++LE + +
Sbjct: 638 MVQSRMQLPIWTFKNEILNTLNSHRALIICSETGSGKSTQIPSFILEHEMLSGRPCKIYV 697
Query: 636 TQPRRVAAMSVAKRVSEEMDTELGDK------VGYAIRFEDVTGPSTLIKYMTDGVLLRE 689
T+PRR++A+S+A+RVSEE+ D +G+A+R E P+T + + T GV++R
Sbjct: 698 TEPRRISAISLARRVSEELGESKNDVGTSRSLIGFAVRLESKVSPATRLVFATTGVVVRM 757
Query: 690 TLKDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFF 749
+ D +V+DE HERS+ +D L +L++++ +R+D KLI+ SAT++A +FS +
Sbjct: 758 LERPDDFQDITHVVLDEVHERSIDSDFLLIVLRRLMQKRQDLKLILMSATVDANRFSTYL 817
Query: 750 GSVPIFHIPGRTFPVNTLYSKTPCE 774
G VP+ +IPGRTFPV T + + E
Sbjct: 818 GGVPVLNIPGRTFPVETKFLEDAIE 842
Score = 284 (105.0 bits), Expect = 1.2e-53, Sum P(4) = 1.2e-53
Identities = 85/321 (26%), Positives = 149/321 (46%)
Query: 796 ILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEG 855
IL+F+ G EI + ++L+S T + +I ++S + +D Q K F +G
Sbjct: 922 ILVFLPGMAEI-------RRLNDELLSEPTFQ-HGWIIHALHSSIASDEQEKAFVVPPDG 973
Query: 856 TRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXX 915
RK ++ATNIAET +T+ I VID G K ++ + + L +S
Sbjct: 974 MRKIVIATNIAETGITIPDITAVIDAGKEKTMRFDERRQLSRLVEAFISRANAKQRRGRA 1033
Query: 916 XXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXX--XXFDFMDPP 973
C+ ++T+ + N + PE+ R +L ++V + +DPP
Sbjct: 1034 GRVQRGICFHMFTKHRHDNLLAEQQTPEMLRLSLQDLVLRVKICKLGEVEPTLLEALDPP 1093
Query: 974 PQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIV 1033
+NI ++ L + AL + LT LG ++ + PLD L K+++ G CLD ++I
Sbjct: 1094 SSKNIRRAIDALKEVKALTSTENLTPLGQQLAKLPLDVFLGKLIIHGAFFKCLDAAISIA 1153
Query: 1034 SMLSVPSVFFRPKDRAEESDAAREKFFVQESDHLTLLYVYQQWKE-------HQYRGDWC 1086
++LS S F + +A R F +SD LT+ Y WK ++Y +C
Sbjct: 1154 AILSCKSPFVNTMGSNAQKEAVRLGFRRGDSDLLTVYNAYCAWKRTRSTPGANEYA--FC 1211
Query: 1087 EEHYLHVKSLRKAREVRSQLL 1107
+++L ++L +V+ QL+
Sbjct: 1212 RKNFLSPQTLLNIEDVKLQLM 1232
Score = 55 (24.4 bits), Expect = 1.2e-53, Sum P(4) = 1.2e-53
Identities = 36/163 (22%), Positives = 68/163 (41%)
Query: 1095 SLRKAREVRSQLLDILKTLKIPLTSSGHDFDVVRKAICSAYFHNAARLKGVGEYINCRNG 1154
SL +AR R + T T++ +D +++ I +++ +G G + N N
Sbjct: 1250 SLNRARSTRQR--HFFTTPPSHDTNNAND-TLIQSVIAWSFYPKLLTREGKG-WRNIANN 1305
Query: 1155 MPCHLHPSSA--IYGLGY--TP---EYVVYHELIL-TTKEYMQCATAVEPQW----LSEL 1202
LHP+S + +P +Y+ Y+ ++ ++Y T+ W L
Sbjct: 1306 QSVTLHPTSVNRVPSASSERSPGQSQYLSYYHIMQGRNRKYNAFETSAVEDWAVAVLCGE 1365
Query: 1203 GP--MFFSVKDSDTSMLEHKKKQKESKTAMEEEMENLRKIQAD 1243
G M+ V DT+ L + +S AM+ +R+I A+
Sbjct: 1366 GDFKMYPGVLSIDTNRLRFSLRDWKSMLAMKVLATRIREILAN 1408
Score = 41 (19.5 bits), Expect = 1.2e-53, Sum P(4) = 1.2e-53
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 90 IDEVVS-NATNGKRSHASRRYRETSARDITDAENP-MAVG 127
+DE+ S TNG+R A + S R+ + P A G
Sbjct: 223 LDELPSYTQTNGQRKDADKNVSWISDRETSGKSAPKFAAG 262
>UNIPROTKB|Q68FK8 [details] [associations]
symbol:dhx9 "ATP-dependent RNA helicase A-like protein"
species:8355 "Xenopus laevis" [GO:0070937 "CRD-mediated mRNA
stability complex" evidence=ISS] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 Gene3D:3.30.160.20
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:1660
HOVERGEN:HBG039429 KO:K13184 GO:GO:0070937 EMBL:BC079701
RefSeq:NP_001087383.1 UniGene:Xl.55621 ProteinModelPortal:Q68FK8
SMR:Q68FK8 PRIDE:Q68FK8 GeneID:447207 KEGG:xla:447207
Xenbase:XB-GENE-967780 Uniprot:Q68FK8
Length = 1262
Score = 331 (121.6 bits), Expect = 2.1e-53, Sum P(3) = 2.1e-53
Identities = 75/229 (32%), Positives = 125/229 (54%)
Query: 547 EQGEIDFREDAKFSQHMKKGEA--VSDFAKSKTLAEQRQYLPIFSVRDELLQVIRENQXX 604
++G + F + S +K + D K + R+ LP+ +E++ + +
Sbjct: 351 DEGPLAFATQEQISLELKNEHMYHIQD-PNIKQVLIDRESLPVKKFEEEIMHAVHNSPVV 409
Query: 605 XXXGETGSGKTTQLTQYLLEDGYTTNGIVGC----TQPRRVAAMSVAKRVSEEMDTELGD 660
G TG GKTTQ+ QY+L++ + C TQPRR++A+SVA+RV+ E E+G
Sbjct: 410 IIRGATGCGKTTQVPQYILDEYIRNDRAAQCNIVVTQPRRISAVSVAERVAFERGEEIGK 469
Query: 661 KVGYAIRFEDVTG-PSTLIKYMTDGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLFG 719
GY++RFE V P + + T GVLLR+ +S + +++DE HER ++TD L
Sbjct: 470 SCGYSVRFESVLPRPHASMLFCTVGVLLRKL--ESGIRGISHVIVDEIHERDINTDFLLV 527
Query: 720 ILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPIFHIPGRTFPVNTLY 768
+L+ V+ + ++I+ SAT++ F ++F + PI + GRTFPV Y
Sbjct: 528 VLRDVIQAFPEIRVILMSATIDTSMFCEYFFNCPIIEVFGRTFPVQEYY 576
Score = 326 (119.8 bits), Expect = 2.1e-53, Sum P(3) = 2.1e-53
Identities = 100/356 (28%), Positives = 170/356 (47%)
Query: 770 KTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVP 829
+TP E +EA +K T+++ PG +L+F+ G + I +A+++ +E +
Sbjct: 633 ETPLE-LIEALLKYIETLNV---PGAVLVFLPGWNLI----YAMQKHLEMNPHFGSHSY- 683
Query: 830 ELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVY 889
ILP++SQ+P D Q K+F+ +G K I++TNIAETS+T++ + YVID+ K+K++
Sbjct: 684 --CILPLHSQIPRDEQRKVFDPVPDGIIKVILSTNIAETSITINDVVYVIDSCKQKVKLF 741
Query: 890 NPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNL 949
M S C+ L +++ + +++ PEI RT L
Sbjct: 742 TSHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSKARF-DKLETHLTPEIFRTPL 800
Query: 950 GNVVXXXXXXXXXXXXXF--DFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEF 1007
V F ++PPP + ++ + + L L AL++ LT LG + +
Sbjct: 801 HEVALSIKLLRLGGIGHFLSKAIEPPPLDAVIEAEHTLRELDALDSNDELTPLGRILAKL 860
Query: 1008 PLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAE--ESDAAREKFFVQESD 1065
P++P L KM+++G D + TI + P F R + A +F SD
Sbjct: 861 PIEPRLGKMMIIGCIFYVGDALCTISAATCFPEPFISEGRRLGYVHRNFAGNRF----SD 916
Query: 1066 HLTLLYVYQQWKEHQYRGD-----WCEEHYLHVKSLRKAREVRSQLLDILKTLKIP 1116
H+ LL V+Q W + + G+ +CE L++ +LR E + QL DIL P
Sbjct: 917 HVALLSVFQAWDDARMGGEDAETRFCEHKRLNMATLRMTWEAKVQLKDILVNAGFP 972
Score = 50 (22.7 bits), Expect = 1.0e-24, Sum P(3) = 1.0e-24
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 807 EAACF-ALKERMEQLISSTTREVPELL 832
E+AC AL+ +E L+ T+E PE+L
Sbjct: 1098 ESACITALRAALEALVVEVTKE-PEIL 1123
Score = 45 (20.9 bits), Expect = 2.1e-53, Sum P(3) = 2.1e-53
Identities = 23/98 (23%), Positives = 37/98 (37%)
Query: 27 GGLFVPNKERPIFRAPGAKAQSGLGVRAVEKGGGSQIDDGFKVPRVASVAASIDEEEKSE 86
GG P+ + A +S G GGG+Q + G + A +E+E
Sbjct: 106 GGPLPPHLSLQAESSGAAPMRSNTGFNPPAYGGGAQWERG---ANLKDYYAKREEQEAQA 162
Query: 87 SSGIDEVVSNAT---NGKRSHASRRYRETSARDITDAE 121
+ +EV NA N +A R + ++ T E
Sbjct: 163 TLESEEVDLNAGLHGNWTLENAKARLNQFFQKEKTQGE 200
Score = 39 (18.8 bits), Expect = 8.9e-53, Sum P(3) = 8.9e-53
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 511 NKSRQRFWELAGSQMGNILGVKKTAEQVDADT 542
NK+RQ+F N +G+ + + DA T
Sbjct: 28 NKNRQKFMCEVRIDGFNYIGMGNSTNKKDAQT 59
>WB|WBGene00009922 [details] [associations]
symbol:F52B5.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] InterPro:IPR001374 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF01424 Pfam:PF04408 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00393 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0009792 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:Z75541
PIR:T22493 RefSeq:NP_492260.1 ProteinModelPortal:Q20644 SMR:Q20644
STRING:Q20644 PaxDb:Q20644 EnsemblMetazoa:F52B5.3 GeneID:172615
KEGG:cel:CELE_F52B5.3 UCSC:F52B5.3 CTD:172615 WormBase:F52B5.3
InParanoid:Q20644 OMA:NSMPETQ NextBio:876269 Uniprot:Q20644
Length = 1425
Score = 320 (117.7 bits), Expect = 2.3e-53, Sum P(4) = 2.3e-53
Identities = 77/200 (38%), Positives = 109/200 (54%)
Query: 575 SKTLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNGIVG 634
SK L + R LP D++L+ I G TG GKTTQ+ Q++L++ + N V
Sbjct: 171 SKELQKVRNSLPASKYCDQVLKSISSCNVVIISGGTGCGKTTQVPQFILDEAHENNKHVR 230
Query: 635 C--TQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLK 692
TQPRR+AA+S+A+RV+ E +G VGY +R + T++ Y T GVLLR
Sbjct: 231 VMVTQPRRIAAISIAERVARERGEPIGRTVGYQVRLDSRRSDDTVLTYCTTGVLLRMLTS 290
Query: 693 DSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATL--NAQKFSDFFG 750
D IVMDE HER ++TD L L++ + R D K+I+ SAT+ N Q FS++F
Sbjct: 291 DPVASGITHIVMDEIHEREINTDYLLIALRECLKMRPDLKVILMSATIEGNMQLFSNYFE 350
Query: 751 --SVPIFHIPGRTFPVNTLY 768
S+ + I R F V Y
Sbjct: 351 NHSMDVIRIESRAFDVKVFY 370
Score = 230 (86.0 bits), Expect = 2.3e-53, Sum P(4) = 2.3e-53
Identities = 61/221 (27%), Positives = 109/221 (49%)
Query: 775 DYVEAAVKQAMTIHITSPP-GDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLI 833
DYV + Q + SP G IL+F+ G ++I+ A+ ++ + + +++
Sbjct: 627 DYV--LLDQVIQYLADSPVFGTILVFLPGYEDIQQMLKAI-----DCWKNSLKNMKNVIV 679
Query: 834 LPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKM 893
LP++SQ+ + IF+ + TRK I+ATNIAE S+T++ + +V+DTG K K ++ +
Sbjct: 680 LPLHSQMTSINHGDIFKSVPKDTRKIILATNIAEASITIEDVIFVVDTGKVKEKSFDHEA 739
Query: 894 GMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVV 953
+ L V P++ C RLYTE Y N M + + E++R + +V
Sbjct: 740 KLSTLTVKPIARSNADQRSGRAGRVANGYCIRLYTEQEY-NSMPETQIAEMKRAAIYDVT 798
Query: 954 XXXXXXXXXXXXXFDFM----DPPPQENILNSMYQLWVLGA 990
+F+ +PP +E+IL ++ L +GA
Sbjct: 799 LHAKLFAPKTLKISEFLSLAPEPPEKESILQAITFLEQIGA 839
Score = 164 (62.8 bits), Expect = 2.3e-53, Sum P(4) = 2.3e-53
Identities = 43/131 (32%), Positives = 67/131 (51%)
Query: 997 LTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSV--PSVFFRPKDRAEESDA 1054
LTDLG M PLDP L++MLL G L CL ++ +V++L+ P V +DR +S
Sbjct: 873 LTDLGRLMARLPLDPQLSRMLLFGLALKCLTPIVNLVALLASREPYVLALSEDRDLQSKM 932
Query: 1055 AREKFFVQESDHLTLLYVYQQW--KEHQYRGDWCEEHYLHVKSLRKAREVRSQLLDILKT 1112
E SDHL + + ++ K + + +C +H+L+ ++R + R QLL L
Sbjct: 933 KFEMAQQDLSDHLLYIRLCNEFCSKNNSQQNQFCRDHFLNFSTMRMVQGTRRQLLRELVR 992
Query: 1113 LKIPLTSSGHD 1123
K+ S D
Sbjct: 993 AKLINISPNRD 1003
Score = 43 (20.2 bits), Expect = 2.3e-24, Sum P(4) = 2.3e-24
Identities = 13/47 (27%), Positives = 24/47 (51%)
Query: 634 GCTQPRRVAAMSVAKRVSEEMDTELGDK-VGYAIRFEDVTGPSTLIK 679
G + +R++ + + K+ EE+ T L D+ V Y + DV + K
Sbjct: 562 GFGEKQRISTL-LEKKFKEELKTALPDRTVYYHPQMNDVVDKTDFSK 607
Score = 39 (18.8 bits), Expect = 2.3e-53, Sum P(4) = 2.3e-53
Identities = 7/13 (53%), Positives = 8/13 (61%)
Query: 1153 NGMPCHLHPSSAI 1165
N P LHPSS +
Sbjct: 1051 NDKPAFLHPSSMV 1063
>MGI|MGI:108177 [details] [associations]
symbol:Dhx9 "DEAH (Asp-Glu-Ala-His) box polypeptide 9"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001085 "RNA polymerase II transcription factor
binding" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005813 "centrosome" evidence=ISO]
[GO:0007623 "circadian rhythm" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=ISO] [GO:0034605 "cellular response to heat"
evidence=IDA] [GO:0070934 "CRD-mediated mRNA stabilization"
evidence=ISO] [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=ISO] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 MGI:MGI:108177 GO:GO:0005524
GO:GO:0034605 GO:GO:0005730 GO:GO:0003677 GO:GO:0007623
Gene3D:3.30.160.20 GO:GO:0030529 GO:GO:0003725 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247063 CTD:1660
HOVERGEN:HBG039429 KO:K13184 OrthoDB:EOG4HHP1J GO:GO:0070937
EMBL:U91922 EMBL:AF023530 EMBL:AY512925 EMBL:BC089159 EMBL:AK013423
EMBL:U92080 IPI:IPI00339468 IPI:IPI00607914 IPI:IPI00875791
RefSeq:NP_031868.2 UniGene:Mm.20000 PDB:1UIL PDB:1WHQ PDB:2RS6
PDB:2RS7 PDBsum:1UIL PDBsum:1WHQ PDBsum:2RS6 PDBsum:2RS7
ProteinModelPortal:O70133 SMR:O70133 IntAct:O70133 STRING:O70133
PhosphoSite:O70133 PaxDb:O70133 PRIDE:O70133 GeneID:13211
KEGG:mmu:13211 UCSC:uc007czy.1 InParanoid:O70133 ChiTaRS:DHX9
EvolutionaryTrace:O70133 NextBio:283382 CleanEx:MM_DHX9
Genevestigator:O70133 GermOnline:ENSMUSG00000042699 Uniprot:O70133
Length = 1380
Score = 332 (121.9 bits), Expect = 3.7e-53, Sum P(2) = 3.7e-53
Identities = 70/198 (35%), Positives = 116/198 (58%)
Query: 576 KTLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNGIVGC 635
+++ ++R+ LP+ E+L+ I N G TG GKTTQ+ QY+L+D + C
Sbjct: 381 QSVLQERELLPVKKFEAEILEAISSNSVVIIRGATGCGKTTQVPQYILDDFIQNDRAAEC 440
Query: 636 ----TQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTG-PSTLIKYMTDGVLLRET 690
TQPRR++A++VA+RV+ E E G GY++RFE + P I + T GVLLR+
Sbjct: 441 NIVVTQPRRISAVAVAERVAYERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKL 500
Query: 691 LKDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFG 750
++ + +++DE HER ++TD L +L+ VV + ++++ SAT++ F ++F
Sbjct: 501 --EAGIRGISHVIVDEIHERDINTDFLLVVLRDVVLAYPEVRIVLMSATIDTTMFCEYFF 558
Query: 751 SVPIFHIPGRTFPVNTLY 768
+ PI + GRTFPV +
Sbjct: 559 NCPIIEVYGRTFPVQEYF 576
Score = 317 (116.6 bits), Expect = 3.7e-53, Sum P(2) = 3.7e-53
Identities = 109/413 (26%), Positives = 185/413 (44%)
Query: 770 KTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVP 829
+TP E +EA +K T+++ PG +L+F+ G + I + +++ +E +
Sbjct: 633 ETPFE-LIEALLKYIETLNV---PGAVLVFLPGWNLI----YTMQKHLENNSHFGSHRYQ 684
Query: 830 ELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVY 889
ILP++SQ+P + Q K+F+ +G K I++TNIAETS+T++ + YVID+ K+K++
Sbjct: 685 ---ILPLHSQIPREEQRKVFDPVPDGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLF 741
Query: 890 NPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNL 949
M S C+ L + + + + + PE+ RT L
Sbjct: 742 TAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARF-DRLETHMTPEMFRTPL 800
Query: 950 GNVVXXXXXXXXXXXXXF--DFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEF 1007
+ F ++PPP + I+ + + L L AL+ LT LG + +
Sbjct: 801 HEIALSIKLLRLGGIGQFLAKAIEPPPLDAIIEAEHTLRELDALDANDELTPLGRILAKL 860
Query: 1008 PLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAE--ESDAAREKFFVQESD 1065
P++P KM++MG D V TI + P F R + A +F SD
Sbjct: 861 PIEPRFGKMMIMGCIFYVGDAVCTISAATCFPEPFISEGKRLGYIHRNFAGNRF----SD 916
Query: 1066 HLTLLYVYQQWKEHQYRGD-----WCEEHYLHVKSLRKAREVRSQLLDILKTLKIP---- 1116
H+ LL V+Q W + + G+ +CE+ L++ +LR E + QL +IL P
Sbjct: 917 HVALLSVFQAWDDARMSGEEAEIRFCEQKRLNMATLRMTWEAKVQLKEILINSGFPEDCL 976
Query: 1117 ----LTSSGHD--FDVVRKAICSAYFHNAARLKGVGEYINCRNGMPCHLHPSS 1163
T++G D DVV + + N K + + G +H SS
Sbjct: 977 LTQVFTNTGPDNNLDVVISLLAFGVYPNVCYHKEKRKILTTE-GRNALIHKSS 1028
Score = 40 (19.1 bits), Expect = 4.3e-24, Sum P(2) = 4.3e-24
Identities = 7/25 (28%), Positives = 15/25 (60%)
Query: 808 AACFALKERMEQLISSTTREVPELL 832
AAC ++ ME L+ +++ P ++
Sbjct: 1099 AACITIRAAMEALVVEVSKQ-PNII 1122
>RGD|1308548 [details] [associations]
symbol:Dhx9 "DEAH (Asp-Glu-Ala-His) box polypeptide 9"
species:10116 "Rattus norvegicus" [GO:0001085 "RNA polymerase II
transcription factor binding" evidence=IEA;ISO] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0007623 "circadian rhythm" evidence=IEA;ISO]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA;ISO]
[GO:0034605 "cellular response to heat" evidence=IEA;ISO]
[GO:0070934 "CRD-mediated mRNA stabilization" evidence=IEA;ISO]
[GO:0070937 "CRD-mediated mRNA stability complex" evidence=IEA;ISO]
InterPro:IPR001159 InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137
PROSITE:PS51194 SMART:SM00358 SMART:SM00490 SMART:SM00847
InterPro:IPR014720 RGD:1308548 GO:GO:0005524 Gene3D:3.30.160.20
GO:GO:0005622 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:1660 KO:K13184 OrthoDB:EOG4HHP1J
EMBL:CH473958 IPI:IPI00947663 RefSeq:NP_001100654.1
UniGene:Rn.107359 Ensembl:ENSRNOT00000064860 GeneID:304859
KEGG:rno:304859 UCSC:RGD:1308548 NextBio:653729 Uniprot:D4A9D6
Length = 1174
Score = 336 (123.3 bits), Expect = 6.0e-53, Sum P(3) = 6.0e-53
Identities = 74/229 (32%), Positives = 128/229 (55%)
Query: 547 EQGEIDFREDAKFSQHMKKGEA--VSDFAKSKTLAEQRQYLPIFSVRDELLQVIRENQXX 604
++G + + + S +K A + +++ ++R+ LP+ E+L+ I +N
Sbjct: 351 DEGPLAYASTEQISMDLKNELAYQMEQDHNLQSVLQERELLPVKKFEAEILEAISQNSVV 410
Query: 605 XXXGETGSGKTTQLTQYLLEDGYTTNGIVGC----TQPRRVAAMSVAKRVSEEMDTELGD 660
G TG GKTTQ+ QY+L+D + C TQPRR++A++VA+RV+ E E G
Sbjct: 411 IIRGATGCGKTTQVPQYILDDFIQNDRAAECNIVVTQPRRISAVAVAERVAYERGEEPGK 470
Query: 661 KVGYAIRFEDVTG-PSTLIKYMTDGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLFG 719
GY++RFE + P I + T GVLLR+ ++ + +++DE HER ++TD L
Sbjct: 471 SCGYSVRFESILPRPHASIMFCTVGVLLRKL--EAGIRGISHVIVDEIHERDINTDFLLV 528
Query: 720 ILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPIFHIPGRTFPVNTLY 768
+L+ VV + ++++ SAT++ F ++F + PI + GRTFPV +
Sbjct: 529 VLRDVVLAYPEVRIVLMSATIDTTMFCEYFFNCPIIEVYGRTFPVQEYF 577
Score = 316 (116.3 bits), Expect = 6.0e-53, Sum P(3) = 6.0e-53
Identities = 108/413 (26%), Positives = 185/413 (44%)
Query: 770 KTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVP 829
+TP E +EA +K T+++ PG +L+F+ G + I + +++ +E +
Sbjct: 634 ETPFE-LIEALLKYIETLNV---PGAVLVFLPGWNLI----YTMQKHLENNSHFGSHRYQ 685
Query: 830 ELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVY 889
ILP++SQ+P + Q K+F+ +G K I++TNIAETS+T++ + YVID+ K+K++
Sbjct: 686 ---ILPLHSQIPREEQRKVFDPVPDGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLF 742
Query: 890 NPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNL 949
M S C+ L + + + + + PE+ RT L
Sbjct: 743 TAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARF-DRLETHMTPEMFRTPL 801
Query: 950 GNVVXXXXXXXXXXXXXF--DFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEF 1007
+ F ++PPP + ++ + + L L AL+ LT LG + +
Sbjct: 802 HEIALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILAKL 861
Query: 1008 PLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAE--ESDAAREKFFVQESD 1065
P++P KM++MG D V TI + P F R + A +F SD
Sbjct: 862 PIEPRFGKMMIMGCIFYVGDAVCTISAATCFPEPFISEGKRLGYIHRNFAGNRF----SD 917
Query: 1066 HLTLLYVYQQWKEHQYRGD-----WCEEHYLHVKSLRKAREVRSQLLDILKTLKIP---- 1116
H+ LL V+Q W + + G+ +CE+ L++ +LR E + QL +IL P
Sbjct: 918 HVALLSVFQAWDDARMSGEEAEIRFCEQKRLNMATLRMTWEAKVQLKEILINSGFPEDCL 977
Query: 1117 ----LTSSGHD--FDVVRKAICSAYFHNAARLKGVGEYINCRNGMPCHLHPSS 1163
T++G D DVV + + N K + + G +H SS
Sbjct: 978 LTQVFTNTGPDNNLDVVISLLAFGVYPNVCYHKEKRKILTTE-GRNALIHKSS 1029
Score = 44 (20.5 bits), Expect = 6.0e-53, Sum P(3) = 6.0e-53
Identities = 11/48 (22%), Positives = 22/48 (45%)
Query: 43 GAKAQSGLGVRAVEKGGGSQIDDGFKVPRVASVAASIDEEEKSESSGI 90
G ++ SG G G+ + D + V A+++ EE ++G+
Sbjct: 128 GVESSSGYGSPGPTWDRGANLKDYYSRKEEQEVQATLESEEVDLNAGL 175
>UNIPROTKB|Q5R874 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9601
"Pongo abelii" [GO:0030529 "ribonucleoprotein complex"
evidence=ISS] [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=ISS] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 GO:GO:0005524 GO:GO:0005813
GO:GO:0034605 GO:GO:0005730 GO:GO:0003677 Gene3D:3.30.160.20
GO:GO:0030529 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:1660 HOVERGEN:HBG039429 KO:K13184
OrthoDB:EOG4HHP1J GO:GO:0070937 OMA:DDWIRLQ GO:GO:0070934
EMBL:CR859880 RefSeq:XP_002809755.1 UniGene:Pab.8432
ProteinModelPortal:Q5R874 SMR:Q5R874 PRIDE:Q5R874
Ensembl:ENSPPYT00000000510 GeneID:100449914 KEGG:pon:100449914
InParanoid:Q5R874 Uniprot:Q5R874
Length = 1269
Score = 340 (124.7 bits), Expect = 6.6e-53, Sum P(3) = 6.6e-53
Identities = 82/257 (31%), Positives = 138/257 (53%)
Query: 547 EQGEIDFREDAKFSQHMKKGEAVSDFAKS---KTLAEQRQYLPIFSVRDELLQVIRENQX 603
++G + F + S +K E + + + + ++R+ LP+ E+L+ I +N
Sbjct: 348 DEGPLAFATPEQISMDLKN-ELMYQLEQDHDLQAILQERELLPVKKFESEILEAISQNSV 406
Query: 604 XXXXGETGSGKTTQLTQYLLEDGYTTNGIVGC----TQPRRVAAMSVAKRVSEEMDTELG 659
G TG GKTTQ+ Q++L+D + C TQPRR++A+SVA+RV+ E E G
Sbjct: 407 VIIRGATGCGKTTQVPQFILDDFIQNDRAAECNIVVTQPRRISAVSVAERVAFERGEEPG 466
Query: 660 DKVGYAIRFEDVTG-PSTLIKYMTDGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLF 718
GY++RFE + P I + T GVLLR+ ++ + +++DE HER ++TD L
Sbjct: 467 KSCGYSVRFESILPRPHASIMFCTVGVLLRKL--EAGIRGISHVIVDEIHERDINTDFLL 524
Query: 719 GILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPIFHIPGRTFPVNTLYSKTPCEDYVE 778
+L+ VV + ++++ SAT++ F ++F + PI + GRT+PV + ED ++
Sbjct: 525 VVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTYPVQEYF----LEDCIQ 580
Query: 779 AAVKQAMTIHITSPPGD 795
MT H PP D
Sbjct: 581 ------MT-HFVPPPKD 590
Score = 310 (114.2 bits), Expect = 6.6e-53, Sum P(3) = 6.6e-53
Identities = 109/414 (26%), Positives = 185/414 (44%)
Query: 770 KTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVP 829
+TP E +EA +K T+++ PG +L+F+ G + I + +++ +E +
Sbjct: 631 ETPFE-LIEALLKYIETLNV---PGAVLVFLPGWNLI----YTMQKHLEMNPHFGSHRYQ 682
Query: 830 ELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVY 889
ILP++SQ+P + Q K+F+ G K I++TNIAETS+T++ + YVID+ K+K++
Sbjct: 683 ---ILPLHSQIPREEQRKVFDPVPVGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLF 739
Query: 890 NPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPV-PEIQRTN 948
M S C+ L + + + E L + + PE+ RT
Sbjct: 740 TAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARF--ERLETHMTPEMFRTP 797
Query: 949 LGNVVXXXXXXXXXXXXXF--DFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVE 1006
L + F ++PPP + ++ + + L L AL+ LT LG + +
Sbjct: 798 LHEIALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILAK 857
Query: 1007 FPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAE--ESDAAREKFFVQES 1064
P++P KM++MG D + TI + P F R + A +F S
Sbjct: 858 LPIEPRFGKMMIMGCIFYVGDAICTIAAATCFPEPFINEGKRLGYIHRNFAGNRF----S 913
Query: 1065 DHLTLLYVYQQWKEHQYRGD-----WCEEHYLHVKSLRKAREVRSQLLDILKTLKIP--- 1116
DH+ LL V+Q W + + G+ +CE L++ +LR E + QL +IL P
Sbjct: 914 DHVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKEILINSGFPEDC 973
Query: 1117 -----LTSSGHD--FDVVRKAICSAYFHNAARLKGVGEYINCRNGMPCHLHPSS 1163
T++G D DVV + + N K + + G +H SS
Sbjct: 974 LLTQVFTNTGPDNNLDVVISLLAFGVYPNVCYHKEKRKILTTE-GRNALIHKSS 1026
Score = 47 (21.6 bits), Expect = 6.6e-53, Sum P(3) = 6.6e-53
Identities = 21/83 (25%), Positives = 33/83 (39%)
Query: 9 LVDLDKTTQLLEPEI-TNGGGLFVPNKERPIFRAPGAKAQSGLGVRAVEKGGGSQIDDGF 67
L D TT E ++ T GG P+ A SG GV G+ + D +
Sbjct: 91 LTDTPDTTANAEGDLPTTMGGPLPPHLALKAENNSEVGA-SGYGVPGPTWDRGANLKDYY 149
Query: 68 KVPRVASVAASIDEEEKSESSGI 90
V A+++ EE ++G+
Sbjct: 150 SRKEEQEVQATLESEEVDLNAGL 172
>UNIPROTKB|Q08211 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9606
"Homo sapiens" [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IEA] [GO:0034605 "cellular response to heat" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005813
"centrosome" evidence=IDA] [GO:0070937 "CRD-mediated mRNA stability
complex" evidence=IDA] [GO:0070934 "CRD-mediated mRNA
stabilization" evidence=IMP] [GO:0030529 "ribonucleoprotein
complex" evidence=IDA] [GO:0003724 "RNA helicase activity"
evidence=TAS] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=TAS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0001085 "RNA polymerase II transcription factor binding"
evidence=IPI] Reactome:REACT_71 InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 GO:GO:0005813 GO:GO:0005654 GO:GO:0034605
GO:GO:0005730 GO:GO:0003677 Reactome:REACT_1675 Gene3D:3.30.160.20
EMBL:CH471067 GO:GO:0030529 GO:GO:0003725 GO:GO:0004003
GO:GO:0000398 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000247063 CTD:1660 HOVERGEN:HBG039429 KO:K13184
OrthoDB:EOG4HHP1J GO:GO:0070937 OMA:DDWIRLQ EMBL:L13848 EMBL:U03643
EMBL:Y10658 EMBL:AB451248 EMBL:AB451372 EMBL:AL355999 EMBL:AL662837
EMBL:BC025245 EMBL:BC058896 EMBL:BC107881 EMBL:BC137136
IPI:IPI00844578 RefSeq:NP_001348.2 UniGene:Hs.191518 PDB:3LLM
PDBsum:3LLM ProteinModelPortal:Q08211 SMR:Q08211 DIP:DIP-31504N
IntAct:Q08211 MINT:MINT-5000572 STRING:Q08211 PhosphoSite:Q08211
DMDM:116241330 SWISS-2DPAGE:Q08211 PaxDb:Q08211 PRIDE:Q08211
Ensembl:ENST00000367549 GeneID:1660 KEGG:hsa:1660 UCSC:uc001gpr.3
GeneCards:GC01P182808 H-InvDB:HIX0001404 H-InvDB:HIX0149309
HGNC:HGNC:2750 HPA:CAB011819 HPA:HPA028050 MIM:603115
neXtProt:NX_Q08211 PharmGKB:PA27232 InParanoid:Q08211
GenomeRNAi:1660 NextBio:6832 PMAP-CutDB:Q08211 ArrayExpress:Q08211
Bgee:Q08211 CleanEx:HS_DHX9 Genevestigator:Q08211
GermOnline:ENSG00000135829 GO:GO:0070934 Uniprot:Q08211
Length = 1270
Score = 340 (124.7 bits), Expect = 6.6e-53, Sum P(3) = 6.6e-53
Identities = 82/257 (31%), Positives = 138/257 (53%)
Query: 547 EQGEIDFREDAKFSQHMKKGEAVSDFAKS---KTLAEQRQYLPIFSVRDELLQVIRENQX 603
++G + F + S +K E + + + + ++R+ LP+ E+L+ I +N
Sbjct: 348 DEGPLAFATPEQISMDLKN-ELMYQLEQDHDLQAILQERELLPVKKFESEILEAISQNSV 406
Query: 604 XXXXGETGSGKTTQLTQYLLEDGYTTNGIVGC----TQPRRVAAMSVAKRVSEEMDTELG 659
G TG GKTTQ+ Q++L+D + C TQPRR++A+SVA+RV+ E E G
Sbjct: 407 VIIRGATGCGKTTQVPQFILDDFIQNDRAAECNIVVTQPRRISAVSVAERVAFERGEEPG 466
Query: 660 DKVGYAIRFEDVTG-PSTLIKYMTDGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLF 718
GY++RFE + P I + T GVLLR+ ++ + +++DE HER ++TD L
Sbjct: 467 KSCGYSVRFESILPRPHASIMFCTVGVLLRKL--EAGIRGISHVIVDEIHERDINTDFLL 524
Query: 719 GILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPIFHIPGRTFPVNTLYSKTPCEDYVE 778
+L+ VV + ++++ SAT++ F ++F + PI + GRT+PV + ED ++
Sbjct: 525 VVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTYPVQEYF----LEDCIQ 580
Query: 779 AAVKQAMTIHITSPPGD 795
MT H PP D
Sbjct: 581 ------MT-HFVPPPKD 590
Score = 310 (114.2 bits), Expect = 6.6e-53, Sum P(3) = 6.6e-53
Identities = 109/414 (26%), Positives = 185/414 (44%)
Query: 770 KTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVP 829
+TP E +EA +K T+++ PG +L+F+ G + I + +++ +E +
Sbjct: 631 ETPFE-LIEALLKYIETLNV---PGAVLVFLPGWNLI----YTMQKHLEMNPHFGSHRYQ 682
Query: 830 ELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVY 889
ILP++SQ+P + Q K+F+ G K I++TNIAETS+T++ + YVID+ K+K++
Sbjct: 683 ---ILPLHSQIPREEQRKVFDPVPVGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLF 739
Query: 890 NPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPV-PEIQRTN 948
M S C+ L + + + E L + + PE+ RT
Sbjct: 740 TAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARF--ERLETHMTPEMFRTP 797
Query: 949 LGNVVXXXXXXXXXXXXXF--DFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVE 1006
L + F ++PPP + ++ + + L L AL+ LT LG + +
Sbjct: 798 LHEIALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILAK 857
Query: 1007 FPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAE--ESDAAREKFFVQES 1064
P++P KM++MG D + TI + P F R + A +F S
Sbjct: 858 LPIEPRFGKMMIMGCIFYVGDAICTIAAATCFPEPFINEGKRLGYIHRNFAGNRF----S 913
Query: 1065 DHLTLLYVYQQWKEHQYRGD-----WCEEHYLHVKSLRKAREVRSQLLDILKTLKIP--- 1116
DH+ LL V+Q W + + G+ +CE L++ +LR E + QL +IL P
Sbjct: 914 DHVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKEILINSGFPEDC 973
Query: 1117 -----LTSSGHD--FDVVRKAICSAYFHNAARLKGVGEYINCRNGMPCHLHPSS 1163
T++G D DVV + + N K + + G +H SS
Sbjct: 974 LLTQVFTNTGPDNNLDVVISLLAFGVYPNVCYHKEKRKILTTE-GRNALIHKSS 1026
Score = 47 (21.6 bits), Expect = 6.6e-53, Sum P(3) = 6.6e-53
Identities = 21/83 (25%), Positives = 33/83 (39%)
Query: 9 LVDLDKTTQLLEPEI-TNGGGLFVPNKERPIFRAPGAKAQSGLGVRAVEKGGGSQIDDGF 67
L D TT E ++ T GG P+ A SG GV G+ + D +
Sbjct: 91 LTDTPDTTANAEGDLPTTMGGPLPPHLALKAENNSEVGA-SGYGVPGPTWDRGANLKDYY 149
Query: 68 KVPRVASVAASIDEEEKSESSGI 90
V A+++ EE ++G+
Sbjct: 150 SRKEEQEVQATLESEEVDLNAGL 172
>UNIPROTKB|I3LHZ6 [details] [associations]
symbol:DHX9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00550000074257 OMA:DDWIRLQ
Ensembl:ENSSSCT00000025297 Uniprot:I3LHZ6
Length = 1274
Score = 339 (124.4 bits), Expect = 8.6e-53, Sum P(3) = 8.6e-53
Identities = 83/257 (32%), Positives = 138/257 (53%)
Query: 547 EQGEIDFREDAKFSQHMKKGEAVSDFAKSKTLA---EQRQYLPIFSVRDELLQVIRENQX 603
++G + F + S +K E + + + L ++R+ LP+ E+L+ I +N
Sbjct: 344 DEGPLAFATPEQISVEIKN-ELMYQLEQDRDLQAILQERELLPVKKFESEILEAISQNPV 402
Query: 604 XXXXGETGSGKTTQLTQYLLEDGYTTNGIVGC----TQPRRVAAMSVAKRVSEEMDTELG 659
G TG GKTTQ+ Q++L+D + C TQPRR++A+SVA+RV+ E E G
Sbjct: 403 VIVRGATGCGKTTQVPQFILDDFIQNDRAAECNIVVTQPRRISAVSVAERVAYERGEEPG 462
Query: 660 DKVGYAIRFEDVTG-PSTLIKYMTDGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLF 718
GY++RFE + P I + T GVLLR+ ++ + +++DE HER ++TD L
Sbjct: 463 KSCGYSVRFESILPRPHASIMFCTVGVLLRKL--EAGIRGISHVIVDEIHERDINTDFLL 520
Query: 719 GILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPIFHIPGRTFPVNTLYSKTPCEDYVE 778
+L+ VV + ++++ SAT++ F ++F + PI + GRT+PV + ED ++
Sbjct: 521 VVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTYPVQEYF----LEDCIQ 576
Query: 779 AAVKQAMTIHITSPPGD 795
MT H PP D
Sbjct: 577 ------MT-HFIPPPKD 586
Score = 307 (113.1 bits), Expect = 8.6e-53, Sum P(3) = 8.6e-53
Identities = 107/413 (25%), Positives = 182/413 (44%)
Query: 770 KTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVP 829
+TP E +EA +K T+++ PG +L+F+ G + I + +++ +E
Sbjct: 623 ETPFE-LIEALLKYIETLNV---PGAVLVFLPGWNLI----YTMQKHLEMNPHFGNHRYQ 674
Query: 830 ELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVY 889
ILP++SQ+P + Q K+F+ G K I++TNIAETS+T++ + YVID+ K+K++
Sbjct: 675 ---ILPLHSQIPREEQRKVFDPVPAGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLF 731
Query: 890 NPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNL 949
M S C+ L + + + + + PE+ RT L
Sbjct: 732 TAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARF-DRLETHMTPEMFRTPL 790
Query: 950 GNVVXXXXXXXXXXXXXF--DFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEF 1007
+ F ++PPP + ++ + + L L AL+ LT LG + +
Sbjct: 791 HEIALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILAKL 850
Query: 1008 PLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAE--ESDAAREKFFVQESD 1065
P++P KM++MG D + TI + P F R + A +F SD
Sbjct: 851 PIEPRFGKMMIMGCIFYVGDAICTISAATCFPEPFISEGKRLGYIHRNFAGNRF----SD 906
Query: 1066 HLTLLYVYQQWKEHQYRGD-----WCEEHYLHVKSLRKAREVRSQLLDILKTLKIP---- 1116
H+ LL V+Q W + + G+ +CE L++ +LR E + QL +IL P
Sbjct: 907 HVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKEILINSGFPEDCL 966
Query: 1117 ----LTSSGHD--FDVVRKAICSAYFHNAARLKGVGEYINCRNGMPCHLHPSS 1163
T++G D DVV + + N K + + G +H SS
Sbjct: 967 LTQVFTNTGPDNNLDVVISLLAFGVYPNVCYHKEKRKILTTE-GRNALIHKSS 1018
Score = 50 (22.7 bits), Expect = 8.6e-53, Sum P(3) = 8.6e-53
Identities = 18/66 (27%), Positives = 28/66 (42%)
Query: 26 GGGL-FVPNKERPIFRAPGAKAQSGLGVRAVEKGGGSQIDDGFKVPRVASVAASIDEEEK 84
GGGL P A A+ SG GV G+ + D + V A+++ EE
Sbjct: 103 GGGLPATMGGPLPPHLALKAENNSGYGVTGPTWDRGANLKDYYSRKEEQEVQATLESEEV 162
Query: 85 SESSGI 90
++G+
Sbjct: 163 DLNAGL 168
>UNIPROTKB|G5E5N3 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9913
"Bos taurus" [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=IEA] [GO:0070934 "CRD-mediated mRNA stabilization"
evidence=IEA] [GO:0034605 "cellular response to heat" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001085
"RNA polymerase II transcription factor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 GO:GO:0005524 GO:GO:0005813
GO:GO:0034605 GO:GO:0005730 Gene3D:3.30.160.20 GO:GO:0030529
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 UniGene:Bt.5544 GO:GO:0070937
OMA:DDWIRLQ GO:GO:0070934 EMBL:DAAA02043563 EMBL:DAAA02043564
Ensembl:ENSBTAT00000026409 Uniprot:G5E5N3
Length = 1287
Score = 342 (125.4 bits), Expect = 9.6e-53, Sum P(2) = 9.6e-53
Identities = 83/257 (32%), Positives = 138/257 (53%)
Query: 547 EQGEIDFREDAKFSQHMKKGEAVSDFAKSKTLA---EQRQYLPIFSVRDELLQVIRENQX 603
++G + + + S +K E + + + L ++R+ LP+ E+L+ I +N
Sbjct: 345 DEGPLAYATPEQISMDLKN-ELMYQLEQDRDLQAVLQERELLPVKKFESEILEAISQNPV 403
Query: 604 XXXXGETGSGKTTQLTQYLLEDGYTTNGIVGC----TQPRRVAAMSVAKRVSEEMDTELG 659
G TG GKTTQ+ Q++L+D + C TQPRR++A+SVA+RV+ E E G
Sbjct: 404 VIIRGATGCGKTTQVPQFILDDCIQNDRAAECNIVVTQPRRISAVSVAERVAYERGEEPG 463
Query: 660 DKVGYAIRFEDVTG-PSTLIKYMTDGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLF 718
GY++RFE + P I + T GVLLR+ ++ + +++DE HER ++TD L
Sbjct: 464 KSCGYSVRFESILPRPHASIMFCTVGVLLRKL--EAGIRGISHVIVDEIHERDINTDFLL 521
Query: 719 GILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPIFHIPGRTFPVNTLYSKTPCEDYVE 778
+L+ VV + ++++ SAT++ F ++F + PI + GRTFPV + ED ++
Sbjct: 522 VVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTFPVQEYF----LEDCIQ 577
Query: 779 AAVKQAMTIHITSPPGD 795
MT H PP D
Sbjct: 578 ------MT-HFVPPPKD 587
Score = 302 (111.4 bits), Expect = 9.6e-53, Sum P(2) = 9.6e-53
Identities = 108/414 (26%), Positives = 184/414 (44%)
Query: 770 KTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVP 829
+TP E +EA + T+++ PG +L+F+ G + I + +++ +E +
Sbjct: 628 ETPFE-LIEALLLYIETLNV---PGAVLVFLPGWNLI----YTMQKHLEMNPHFGSHRYQ 679
Query: 830 ELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVY 889
ILP++SQ+P + Q K+F+ G K I++TNIAETS+T++ + YVID+ K+K++
Sbjct: 680 ---ILPLHSQIPREEQRKVFDPVPSGVTKIILSTNIAETSITINDVVYVIDSCKQKVKLF 736
Query: 890 NPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPV-PEIQRTN 948
M S C+ L + + + E L + + PE+ RT
Sbjct: 737 TAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARF--ERLETHMTPEMFRTP 794
Query: 949 LGNVVXXXXXXXXXXXXXF--DFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVE 1006
L + F ++PPP + ++ + + L L AL+ LT LG + +
Sbjct: 795 LHEIALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILAK 854
Query: 1007 FPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAE--ESDAAREKFFVQES 1064
P++P KM++MG D + TI + P F R + A +F S
Sbjct: 855 LPIEPRFGKMMIMGCIFYVGDAICTISAATCFPEPFISEGKRLGYIHRNFAGNRF----S 910
Query: 1065 DHLTLLYVYQQWKEHQYRGD-----WCEEHYLHVKSLRKAREVRSQLLDILKTLKIP--- 1116
DH+ LL V+Q W + + G+ +CE L++ +LR E + QL +IL P
Sbjct: 911 DHVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKEILINSGFPEEC 970
Query: 1117 -----LTSSGHD--FDVVRKAICSAYFHNAARLKGVGEYINCRNGMPCHLHPSS 1163
T++G D DVV + + N K + + G +H SS
Sbjct: 971 LLTQVFTNTGPDNNLDVVISLLAFGVYPNVCYHKEKRKILTTE-GRNALIHKSS 1023
>UNIPROTKB|Q28141 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9913
"Bos taurus" [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=ISS] [GO:0030529 "ribonucleoprotein complex" evidence=ISS]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 GO:GO:0005730 GO:GO:0003677 Gene3D:3.30.160.20
GO:GO:0030529 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000247063 EMBL:X82829 IPI:IPI00714708
PIR:I46032 RefSeq:NP_776461.1 UniGene:Bt.5544
ProteinModelPortal:Q28141 SMR:Q28141 STRING:Q28141 PRIDE:Q28141
GeneID:281115 KEGG:bta:281115 CTD:1660 HOVERGEN:HBG039429
InParanoid:Q28141 KO:K13184 OrthoDB:EOG4HHP1J NextBio:20805185
GO:GO:0070937 Uniprot:Q28141
Length = 1287
Score = 342 (125.4 bits), Expect = 9.6e-53, Sum P(2) = 9.6e-53
Identities = 83/257 (32%), Positives = 138/257 (53%)
Query: 547 EQGEIDFREDAKFSQHMKKGEAVSDFAKSKTLA---EQRQYLPIFSVRDELLQVIRENQX 603
++G + + + S +K E + + + L ++R+ LP+ E+L+ I +N
Sbjct: 345 DEGPLAYATPEQISMDLKN-ELMYQLEQDRDLQAVLQERELLPVKKFESEILEAISQNPV 403
Query: 604 XXXXGETGSGKTTQLTQYLLEDGYTTNGIVGC----TQPRRVAAMSVAKRVSEEMDTELG 659
G TG GKTTQ+ Q++L+D + C TQPRR++A+SVA+RV+ E E G
Sbjct: 404 VIIRGATGCGKTTQVPQFILDDCIQNDRAAECNIVVTQPRRISAVSVAERVAYERGEEPG 463
Query: 660 DKVGYAIRFEDVTG-PSTLIKYMTDGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLF 718
GY++RFE + P I + T GVLLR+ ++ + +++DE HER ++TD L
Sbjct: 464 KSCGYSVRFESILPRPHASIMFCTVGVLLRKL--EAGIRGISHVIVDEIHERDINTDFLL 521
Query: 719 GILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPIFHIPGRTFPVNTLYSKTPCEDYVE 778
+L+ VV + ++++ SAT++ F ++F + PI + GRTFPV + ED ++
Sbjct: 522 VVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTFPVQEYF----LEDCIQ 577
Query: 779 AAVKQAMTIHITSPPGD 795
MT H PP D
Sbjct: 578 ------MT-HFVPPPKD 587
Score = 302 (111.4 bits), Expect = 9.6e-53, Sum P(2) = 9.6e-53
Identities = 108/414 (26%), Positives = 184/414 (44%)
Query: 770 KTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVP 829
+TP E +EA + T+++ PG +L+F+ G + I + +++ +E +
Sbjct: 628 ETPFE-LIEALLLYIETLNV---PGAVLVFLPGWNLI----YTMQKHLEMNPHFGSHRYQ 679
Query: 830 ELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVY 889
ILP++SQ+P + Q K+F+ G K I++TNIAETS+T++ + YVID+ K+K++
Sbjct: 680 ---ILPLHSQIPREEQRKVFDPVPSGVTKIILSTNIAETSITINDVVYVIDSCKQKVKLF 736
Query: 890 NPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPV-PEIQRTN 948
M S C+ L + + + E L + + PE+ RT
Sbjct: 737 TAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARF--ERLETHMTPEMFRTP 794
Query: 949 LGNVVXXXXXXXXXXXXXF--DFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVE 1006
L + F ++PPP + ++ + + L L AL+ LT LG + +
Sbjct: 795 LHEIALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILAK 854
Query: 1007 FPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAE--ESDAAREKFFVQES 1064
P++P KM++MG D + TI + P F R + A +F S
Sbjct: 855 LPIEPRFGKMMIMGCIFYVGDAICTISAATCFPEPFISEGKRLGYIHRNFAGNRF----S 910
Query: 1065 DHLTLLYVYQQWKEHQYRGD-----WCEEHYLHVKSLRKAREVRSQLLDILKTLKIP--- 1116
DH+ LL V+Q W + + G+ +CE L++ +LR E + QL +IL P
Sbjct: 911 DHVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKEILINSGFPEEC 970
Query: 1117 -----LTSSGHD--FDVVRKAICSAYFHNAARLKGVGEYINCRNGMPCHLHPSS 1163
T++G D DVV + + N K + + G +H SS
Sbjct: 971 LLTQVFTNTGPDNNLDVVISLLAFGVYPNVCYHKEKRKILTTE-GRNALIHKSS 1023
>ZFIN|ZDB-GENE-070912-171 [details] [associations]
symbol:dhx9 "DEAH (Asp-Glu-Ala-His) box polypeptide
9" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 ZFIN:ZDB-GENE-070912-171
GO:GO:0005524 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 HOVERGEN:HBG039429 OrthoDB:EOG4HHP1J
OMA:DDWIRLQ EMBL:BX571812 IPI:IPI00491874 UniGene:Dr.79297
SMR:B0S6Z1 Ensembl:ENSDART00000111661 Ensembl:ENSDART00000134918
Uniprot:B0S6Z1
Length = 1271
Score = 323 (118.8 bits), Expect = 2.2e-52, Sum P(2) = 2.2e-52
Identities = 69/198 (34%), Positives = 117/198 (59%)
Query: 576 KTLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLED----GYTTNG 631
+T+ +R LP+ + +++++ I N G TG GKTTQ+ QY+L++ G ++
Sbjct: 386 QTILTERSQLPVKNFQEQIMSTIYNNPVVIIRGATGCGKTTQVPQYILDEFIKGGRASDC 445
Query: 632 IVGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFED-VTGPSTLIKYMTDGVLLRET 690
+ TQPRR++A+SVA+RVS E ++G GY++RFE + P I + T GVLLR+
Sbjct: 446 NIVVTQPRRISAVSVAERVSFERGEDVGKSCGYSVRFESFLPRPHASILFCTVGVLLRKL 505
Query: 691 LKDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFG 750
+S + +++DE HER ++TD L +L+ VV D ++I+ SAT++ F ++F
Sbjct: 506 --ESGIRGISHVIVDEIHERDINTDFLLVVLRDVVQAYPDVRVILMSATIDTTMFKEYFF 563
Query: 751 SVPIFHIPGRTFPVNTLY 768
+ P+ + GR PV +
Sbjct: 564 NCPVIEVHGRAHPVQEYF 581
Score = 318 (117.0 bits), Expect = 2.2e-52, Sum P(2) = 2.2e-52
Identities = 97/362 (26%), Positives = 169/362 (46%)
Query: 764 VNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQLISS 823
++ L K + +EA +K T+ + PG +L+F+ G + I + +++ +E +
Sbjct: 630 MSQLNEKETSFELIEALLKYIETLEV---PGAVLVFLPGWNLI----YFMQKHLEM---N 679
Query: 824 TTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGY 883
+ ILP++SQ+P + Q ++FE +G K I++TNIAETS+T++ + +V+D+
Sbjct: 680 PHFGGHQYRILPLHSQIPREEQRRVFEPVPDGVTKVILSTNIAETSITINDVVFVLDSCK 739
Query: 884 GKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPE 943
K+K++ M S C+ L + + + ++ PE
Sbjct: 740 QKVKLFTSHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARF-EKLETHMTPE 798
Query: 944 IQRTNLGNVVXXXXXXXXXXXXXF--DFMDPPPQENILNSMYQLWVLGALNNVGALTDLG 1001
I RT L V F ++PPP + ++ + + L L AL++ LT LG
Sbjct: 799 IFRTPLHEVALSIKLLRLGGIGNFLSKAIEPPPLDAVIEAEHTLRELDALDSNDELTPLG 858
Query: 1002 WKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAE--ESDAAREKF 1059
+ + P++P L KM++MG D V TI + P F R + A +F
Sbjct: 859 RILAKLPIEPRLGKMMIMGCIFNVGDAVCTISAATCFPEPFINEGKRLGFVHRNFAGSRF 918
Query: 1060 FVQESDHLTLLYVYQQWKEHQYRGD-----WCEEHYLHVKSLRKAREVRSQLLDILKTLK 1114
SDH+ LL V+Q W E + G+ +CE L++ +LR E + QL +IL +
Sbjct: 919 ----SDHVALLSVFQAWDEVRVGGEDAEIRFCEHKRLNMPTLRMTWEAKVQLKEILVNVG 974
Query: 1115 IP 1116
P
Sbjct: 975 FP 976
Score = 39 (18.8 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 780 AVKQAMTIHITSPPGD 795
+V Q + IHI PP D
Sbjct: 295 SVVQELGIHIPPPPQD 310
>UNIPROTKB|G4MR96 [details] [associations]
symbol:MGG_04709 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
EMBL:CM001231 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 RefSeq:XP_003710833.1
EnsemblFungi:MGG_04709T0 GeneID:2677908 KEGG:mgr:MGG_04709
Uniprot:G4MR96
Length = 1504
Score = 383 (139.9 bits), Expect = 2.4e-52, Sum P(3) = 2.4e-52
Identities = 94/290 (32%), Positives = 159/290 (54%)
Query: 570 SDFAKSKTLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTT 629
S + + + R LP+++ R+++L + ++Q GETG GK+TQ+ +LLE
Sbjct: 676 SSSPRYQNMLRSRMQLPMWAFREQVLSAVDQHQVVIVCGETGCGKSTQVPSFLLEHQLAQ 735
Query: 630 NGI--VGCTQPRRVAAMSVAKRVSEEMD---TELGDK---VGYAIRFEDVTGPSTLIKYM 681
+ CT+PRR++A+S+A+RVSEE+ +LG VGY+IR E T T + +
Sbjct: 736 GKACKIYCTEPRRISAISLARRVSEELGEGRNDLGTSRSLVGYSIRLEANTSRETRLVFA 795
Query: 682 TDGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLN 741
T G+++R +DL +V+DE HERS+ +D L +LKK++ RR+D K+++ SAT++
Sbjct: 796 TTGIVMRMLEGSNDLRDITHLVLDEVHERSIDSDFLLIVLKKLMTRRKDLKVVLMSATVD 855
Query: 742 AQKFSDFFGSVPIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMT 801
A +FS++ P+ ++PGRTFPV + ED VE TI P + L+ +
Sbjct: 856 ADRFSNYLDGAPVLNVPGRTFPVQVNF----LEDAVELT---GYTID-QKVPQERLVEID 907
Query: 802 GQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEK 851
E+E + E ++ L +TR L + Y ++ DL ++ +
Sbjct: 908 EDAEVEPESSSKTELLKSLKGYSTRTRNTLAQMDEY-KIDFDLIVQLISR 956
Score = 263 (97.6 bits), Expect = 2.4e-52, Sum P(3) = 2.4e-52
Identities = 75/286 (26%), Positives = 127/286 (44%)
Query: 832 LILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNP 891
L+ P++S + + Q F G RK ++ATNIAET +T+ + VIDTG + ++
Sbjct: 998 LVYPLHSTIATEEQEAAFLVPPHGMRKIVLATNIAETGITIPDVTCVIDTGKHREMRFDE 1057
Query: 892 KMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGN 951
+ M L +S C+ ++T+ + M PE+ R +L +
Sbjct: 1058 RRQMSRLIDTFISRANAKQRRGRAGRVQQGLCFHMFTKYRHDAIMADQQTPEMLRLSLQD 1117
Query: 952 VVXXXXX--XXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPL 1009
+ +DPP +NI ++ L + AL LT LG ++ PL
Sbjct: 1118 LAIRVKICKIGGIEETLSKALDPPSAKNIRRAIDALIDVRALTQGEDLTPLGNQLARLPL 1177
Query: 1010 DPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAAREKFFVQESDHLTL 1069
D L K++L+G CLD +T+ ++LS S F P + ++D R F +SD LT+
Sbjct: 1178 DVFLGKLILLGSIFKCLDMAITVAAILSSKSPFVAPFGQRSQADTVRLGFRRGDSDILTV 1237
Query: 1070 LYVYQQWKE--------HQYRGDWCEEHYLHVKSLRKAREVRSQLL 1107
Y WK +C +++L ++L +++ QLL
Sbjct: 1238 YNAYLSWKRVCLAATGNSSQEFQFCRKNFLSQQTLANIEDLKGQLL 1283
Score = 47 (21.6 bits), Expect = 2.4e-52, Sum P(3) = 2.4e-52
Identities = 22/97 (22%), Positives = 42/97 (43%)
Query: 356 EMEYNSDRAWYDREEGTTMFDTDSSSFILGDDASYQKKEVELAKRLVRKDGSRMSLAQSK 415
E+E +A + E +F+ D ++ + ++E AK++ KD + A S+
Sbjct: 346 ELEIAKLQAKIAKIELDVLFEKDVATAQWREKKIILEREYSAAKKI--KDEEAKAQAASQ 403
Query: 416 KLSQITADNHQWEERQLLRSGAVRGTELSTEFDDEEE 452
+ A Q E ++ R E+ E D+EE+
Sbjct: 404 EPEPAVA---QSAEDEIAREAEKMAAEILAENDNEED 437
Score = 44 (20.5 bits), Expect = 5.0e-17, Sum P(2) = 5.0e-17
Identities = 20/62 (32%), Positives = 27/62 (43%)
Query: 37 PIFRAPGAK--AQSGLGVRAVEKGGGSQIDDGFKVPRVASVAASIDEEEKSESSGIDEVV 94
P+ PG Q AVE G + ID KVP+ V D E + ESS E++
Sbjct: 867 PVLNVPGRTFPVQVNFLEDAVELTGYT-IDQ--KVPQERLVEIDEDAEVEPESSSKTELL 923
Query: 95 SN 96
+
Sbjct: 924 KS 925
Score = 40 (19.1 bits), Expect = 1.3e-51, Sum P(3) = 1.3e-51
Identities = 13/31 (41%), Positives = 16/31 (51%)
Query: 387 DASYQKKEVELAKRLVRKDGSRMSLAQSKKL 417
DA Q+ +E KRL+R G SL K L
Sbjct: 111 DAQRQRNRLETDKRLLR--GQAESLNTRKWL 139
>TAIR|locus:2196255 [details] [associations]
symbol:AT1G58050 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AC079604
IPI:IPI00531251 PIR:F96613 RefSeq:NP_176102.1 UniGene:At.52250
ProteinModelPortal:Q9C6G0 SMR:Q9C6G0 PaxDb:Q9C6G0 PRIDE:Q9C6G0
EnsemblPlants:AT1G58050.1 GeneID:842172 KEGG:ath:AT1G58050
TAIR:At1g58050 HOGENOM:HOG000240812 InParanoid:Q9C6G0 OMA:ISPENED
PhylomeDB:Q9C6G0 ProtClustDB:CLSN2679369 Genevestigator:Q9C6G0
Uniprot:Q9C6G0
Length = 1417
Score = 326 (119.8 bits), Expect = 2.5e-52, Sum P(3) = 2.5e-52
Identities = 101/314 (32%), Positives = 159/314 (50%)
Query: 479 PV-MPIKDPTSDMAIISRKGSALVREIREKQTQNKSRQRFWELAGSQMGNIL-GVKKTAE 536
PV I +P + + +I ++ +L RE+Q + K + E + G+
Sbjct: 481 PVHFAITEPYASLVLIWKQEESLGITSREEQRREKFVESLLEADNFSLTTTSRGIHSALP 540
Query: 537 QVDA------DTAVV--GEQGEIDFREDAKFSQHMKKGEAVSDFAKSKTLAEQRQYLPIF 588
VD+ D VV + + A+ S +K E K K + + R LPI
Sbjct: 541 MVDSCVKENDDLDVVKSNHRARRNSSMAAECSSLKQKQENKKKMQKYKDMLKTRAALPIS 600
Query: 589 SVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLED----GYTTNGIVGCTQPRRVAAM 644
V+ ++LQ ++E GETGSGKTTQ+ Q++L+D G+ + CTQPR A+
Sbjct: 601 EVKKDILQKLKEKDVLVVCGETGSGKTTQVPQFILDDMIDSGHGGYCNIICTQPR---AI 657
Query: 645 SVAKRVSEEM-DTELG-DK--VGYAIRFEDVTGPSTLIKYMTDGVLLRETLKDSDLDKYR 700
+VA+RV++E + G D V Y +R ++ T + + T G+LLR+ + D+ L
Sbjct: 658 TVAQRVADERCEPPPGFDNSVVAYQVRHQNARSDKTRLLFCTTGILLRKLVGDTTLKDVT 717
Query: 701 VIVMDEAHERSLSTDVLFGILKKVVARRR-D-----FKLIVTSATLNAQKFSDFFGSVPI 754
I++DE HERSL D L ILK ++ ++ D K+I+ SAT++A +FS +FG PI
Sbjct: 718 HIIVDEVHERSLMGDFLLIILKSLIEKQSWDNALPKLKVILMSATVDAHQFSRYFGQCPI 777
Query: 755 FHIPGRTFPVNTLY 768
GRT PV T +
Sbjct: 778 ITAQGRTHPVTTYF 791
Score = 305 (112.4 bits), Expect = 2.5e-52, Sum P(3) = 2.5e-52
Identities = 96/332 (28%), Positives = 150/332 (45%)
Query: 764 VNTLYS--KTPCEDYVEAAVKQAMTIHI--TSPPGDILIFMTGQDEIEAACFALKERMEQ 819
+NT Y K V+ + + + HI T G IL+F+ G EI L R+
Sbjct: 849 LNTSYDSIKYIASAVVDYDLLEELICHIDDTCEEGAILVFLPGMSEINM----LLNRLAA 904
Query: 820 LISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVI 879
S R +LP++S + + Q K+F + +G RK I+ATNIAETS+T++ + YVI
Sbjct: 905 --SYRFRGASGDWLLPLHSSIASTEQKKVFLRPPKGIRKVIIATNIAETSITIEDVVYVI 962
Query: 880 DTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPS 939
D+G K YNP + ++ VS C+ LYT + M P
Sbjct: 963 DSGKHKENRYNPHKKLSSMVEDWVSKANARQRMGRAGRVKPGHCFSLYTRHRFEKLMRPY 1022
Query: 940 PVPEIQRTNLGNVVXXXXXXXXXXXXXF--DFMDPPPQENILNSMYQLWVLGALNNVGAL 997
VPE+ R L + F ++PP + I +++ L +GAL L
Sbjct: 1023 QVPEMLRVPLVELCLHIKLLGLGQIKPFLSKALEPPSESAINSAILLLHKVGALEGDEEL 1082
Query: 998 TDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSV---PSVFFRPKDRAEE--- 1051
T LG + + P+D + KMLL G GCL +L+I + LS P V+ + + +
Sbjct: 1083 TPLGHHLAKLPVDLLIGKMLLYGGIFGCLSPILSIAAFLSCCKSPFVYAKDEQNVDRVKL 1142
Query: 1052 ---SDAAREKFFV----QESDHLTLLYVYQQW 1076
SD + ++SDHL ++ Y++W
Sbjct: 1143 ALLSDKLESSSNLNNNDRQSDHLLMVVAYEKW 1174
Score = 63 (27.2 bits), Expect = 2.5e-52, Sum P(3) = 2.5e-52
Identities = 14/48 (29%), Positives = 26/48 (54%)
Query: 1062 QESDHLTLLYVYQQW----KEHQYRG--DWCEEHYLHVKSLRKAREVR 1103
++SDHL ++ Y++W E ++ +CE +L+ +R RE R
Sbjct: 1160 RQSDHLLMVVAYEKWVRILHEQGFKAAESFCESKFLNSSVMRMMRERR 1207
Score = 51 (23.0 bits), Expect = 1.2e-23, Sum P(3) = 1.2e-23
Identities = 19/55 (34%), Positives = 26/55 (47%)
Query: 610 TGSGKTTQLTQYLLEDGYT-TNGIVGCTQPRRVAAMSVAKRVSEEMDTELGDKVG 663
T G+T +T Y LED Y T ++ P AA+S DT + DK+G
Sbjct: 779 TAQGRTHPVTTYFLEDIYERTKYLLASDSP---AALS--------SDTSITDKLG 822
Score = 37 (18.1 bits), Expect = 3.2e-22, Sum P(3) = 3.2e-22
Identities = 5/23 (21%), Positives = 13/23 (56%)
Query: 764 VNTLYSKTPCEDYVEAAVKQAMT 786
+N LY CE +++ ++ ++
Sbjct: 73 LNNLYENLSCEGFLDNQIELVLS 95
>UNIPROTKB|E2RNT3 [details] [associations]
symbol:DHX9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=IEA] [GO:0070934 "CRD-mediated mRNA stabilization"
evidence=IEA] [GO:0034605 "cellular response to heat" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001085
"RNA polymerase II transcription factor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 GO:GO:0005524 GO:GO:0005813
GO:GO:0034605 GO:GO:0005730 Gene3D:3.30.160.20 GO:GO:0030529
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:1660 KO:K13184 GO:GO:0070937
OMA:DDWIRLQ GO:GO:0070934 EMBL:AAEX03005146 EMBL:AAEX03005147
RefSeq:XP_537154.2 Ensembl:ENSCAFT00000020976 GeneID:480032
KEGG:cfa:480032 NextBio:20855120 Uniprot:E2RNT3
Length = 1276
Score = 336 (123.3 bits), Expect = 3.8e-52, Sum P(3) = 3.8e-52
Identities = 78/223 (34%), Positives = 125/223 (56%)
Query: 578 LAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNGIVGC-- 635
+ ++R+ LP+ E+L+ I +N G TG GKTTQ+ Q++L+D + C
Sbjct: 382 ILQERELLPVKKFESEILEAISQNSVVIIRGATGCGKTTQVPQFILDDFIQNDRAAECNI 441
Query: 636 --TQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTG-PSTLIKYMTDGVLLRETLK 692
TQPRR++A+SVA+RV+ E E G GY++RFE V P I + T GVLLR+
Sbjct: 442 VVTQPRRISAVSVAERVAYERGEEPGKSCGYSVRFESVLPRPYASIMFCTVGVLLRKL-- 499
Query: 693 DSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSV 752
++ + +++DE HER ++TD L +L+ VV + ++++ SAT++ F ++F +
Sbjct: 500 EAGIRGISHVIVDEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNC 559
Query: 753 PIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGD 795
PI + GRT+PV + ED ++ MT H PP D
Sbjct: 560 PIIEVYGRTYPVQEYF----LEDCIQ------MT-HFIPPPKD 591
Score = 310 (114.2 bits), Expect = 3.8e-52, Sum P(3) = 3.8e-52
Identities = 110/414 (26%), Positives = 185/414 (44%)
Query: 770 KTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVP 829
+TP E +EA +K T+++ PG +L+F+ G + I + +++ +E +
Sbjct: 632 ETPFE-LIEALLKYIETLNV---PGAVLVFLPGWNLI----YTMQKHLEMNPDFGSHRYQ 683
Query: 830 ELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVY 889
ILP++SQ+P + Q K+F+ G K I++TNIAETS+T++ + YVID+ K+K++
Sbjct: 684 ---ILPLHSQIPREEQRKVFDPVPAGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLF 740
Query: 890 NPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPV-PEIQRTN 948
M S C+ L + + + E L + + PE+ RT
Sbjct: 741 TAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARF--ERLETHMTPEMFRTP 798
Query: 949 LGNVVXXXXXXXXXXXXXF--DFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVE 1006
L + F ++PPP + ++ + + L L AL+ LT LG + +
Sbjct: 799 LHEIALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILAK 858
Query: 1007 FPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAE--ESDAAREKFFVQES 1064
P++P KM++MG D V TI + P F R + A +F S
Sbjct: 859 LPIEPRFGKMMIMGCIFYVGDAVCTISAATCFPEPFISEGKRLGYIHRNFAGNRF----S 914
Query: 1065 DHLTLLYVYQQWKEHQYRGD-----WCEEHYLHVKSLRKAREVRSQLLDILKTLKIP--- 1116
DH+ LL V+Q W + + G+ +CE L++ +LR E + QL +IL P
Sbjct: 915 DHVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKEILINSGFPEDC 974
Query: 1117 -----LTSSGHD--FDVVRKAICSAYFHNAARLKGVGEYINCRNGMPCHLHPSS 1163
T++G D DVV + + N K + + G +H SS
Sbjct: 975 LLTQVFTNTGPDNNLDVVISLLAFGVYPNVCYHKEKRKILTTE-GRNALIHKSS 1027
Score = 44 (20.5 bits), Expect = 3.8e-52, Sum P(3) = 3.8e-52
Identities = 19/73 (26%), Positives = 30/73 (41%)
Query: 24 TNGGGL-FVPNKERPIFRAPGAKAQSGLGVRAVEKGG-----GSQIDDGFKVPRVASVAA 77
T GGGL P A A+ SG+G G G+ + D + V A
Sbjct: 101 TMGGGLPTTMGGPLPPHLALKAENNSGIGASGYGPPGPTWDRGANLKDYYSRKEEQEVQA 160
Query: 78 SIDEEEKSESSGI 90
+++ EE ++G+
Sbjct: 161 TLESEEVDLNAGL 173
Score = 37 (18.1 bits), Expect = 2.0e-51, Sum P(3) = 2.0e-51
Identities = 9/32 (28%), Positives = 17/32 (53%)
Query: 511 NKSRQRFWELAGSQMGNILGVKKTAEQVDADT 542
NK+RQ+F + N +G+ + + DA +
Sbjct: 28 NKNRQKFMCEVRVEGYNYIGMGNSTNKKDAQS 59
>WB|WBGene00004355 [details] [associations]
symbol:rha-1 species:6239 "Caenorhabditis elegans"
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000003 "reproduction"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0007281 "germ cell development"
evidence=IMP] [GO:0045814 "negative regulation of gene expression,
epigenetic" evidence=IMP] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 GO:GO:0005524 GO:GO:0005634
GO:GO:0009792 GO:GO:0051301 GO:GO:0007067 GO:GO:0006355
GO:GO:0003677 Gene3D:3.30.160.20 GO:GO:0006351 GO:GO:0007281
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000247063 GeneTree:ENSGT00550000074257 KO:K13184
EMBL:Z50071 PIR:T24664 RefSeq:NP_495890.2 ProteinModelPortal:Q22307
SMR:Q22307 STRING:Q22307 PaxDb:Q22307 EnsemblMetazoa:T07D4.3.1
EnsemblMetazoa:T07D4.3.2 GeneID:174417 KEGG:cel:CELE_T07D4.3
UCSC:T07D4.3 CTD:174417 WormBase:T07D4.3 InParanoid:Q22307
OMA:DDWIRLQ NextBio:883938 GO:GO:0045814 Uniprot:Q22307
Length = 1301
Score = 348 (127.6 bits), Expect = 2.0e-51, Sum P(3) = 2.0e-51
Identities = 81/238 (34%), Positives = 140/238 (58%)
Query: 547 EQGEIDFREDAKFSQHMKKGEAVSDFAKSKTLAE---QRQYLPIFSVRDELLQVIRENQX 603
++ + F + SQ + + E DF + + L + QR LP+ R+ ++Q + EN+
Sbjct: 343 DEEPLAFMSMEQISQRIMEKE---DFKRGEALDKITAQRGELPVAQYRENIVQTVAENRV 399
Query: 604 XXXXGETGSGKTTQLTQYLLE------DGYTTNGIVGCTQPRRVAAMSVAKRVSEEMDTE 657
GETG GK+TQ+ Q+LLE +G + N +V +QPRR++A+S+A+RV+ E E
Sbjct: 400 TLIKGETGCGKSTQVAQFLLESFLENSNGASFNAVV--SQPRRISAISLAERVANERGEE 457
Query: 658 LGDKVGYAIRFEDVTG-PSTLIKYMTDGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDV 716
+G+ GY +RF+ T P I + T GVLLR + ++ L +++DE HER + TD
Sbjct: 458 VGETCGYNVRFDSATPRPYGSIMFCTVGVLLR--MMENGLRGISHVIIDEIHERDVDTDF 515
Query: 717 LFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVP------IFHIPGRTFPVNTLY 768
+ +L+++++ RD ++++ SAT++ F++FF S+P + + GRTFPV + Y
Sbjct: 516 VLIVLREMISTYRDLRVVLMSATIDTDLFTNFFSSIPDVGPTPVITMHGRTFPVQSFY 573
Score = 292 (107.8 bits), Expect = 2.0e-51, Sum P(3) = 2.0e-51
Identities = 94/329 (28%), Positives = 147/329 (44%)
Query: 794 GDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAK 853
G +L+F+ G EI C L E E + + ILP++SQL + Q K+F
Sbjct: 660 GAVLVFLPGWAEIMTLCNRLLEHQE------FGQANKYEILPLHSQLTSQEQRKVFNHYP 713
Query: 854 EGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXX 913
G RK IV+TNIAETS+T+D + YVID+ K ++Y M S
Sbjct: 714 -GKRKIIVSTNIAETSITIDDVVYVIDSCKAKERMYTSNNNMVHFATVWASKTNVIQRRG 772
Query: 914 XXXXXXXXXCYRLYTESAYLNEMLPSP-VPEIQRTNLGNVVXXXXXXXXXXXXXF--DFM 970
+ L ++ + E L E+ R L + F +
Sbjct: 773 RAGRVRAGYAFHLCSKMRF--EALDDHGTAEMLRIPLHQIALTIKLLRLGSVGEFLGKAL 830
Query: 971 DPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVL 1030
PPP + ++ S L +GAL+ LT LG + P++P +AK+L++G LG +
Sbjct: 831 QPPPYDMVVESEAVLQAMGALDRNLELTSLGKMLARMPIEPVIAKVLILGTALGAGSVMC 890
Query: 1031 TIVSMLSVPSVFF-RPKDRAEESDAAREKFFVQE-SDHLTLLYVYQQWKEHQYRG----- 1083
+ S +S P+ F R K + S R KF + SDH+ ++ V Q ++E G
Sbjct: 891 DVASAMSFPTPFVPREKHHSRLSGTQR-KFAGNKFSDHVAIVSVIQGYREAVQMGASAAE 949
Query: 1084 -DWCEEHYLHVKSLRKAREVRSQLLDILK 1111
++CE + L L+ R QL+D+L+
Sbjct: 950 REFCERYSLSNPVLKMTDGARRQLIDVLR 978
Score = 43 (20.2 bits), Expect = 2.0e-51, Sum P(3) = 2.0e-51
Identities = 17/72 (23%), Positives = 31/72 (43%)
Query: 1084 DWCEEHYLHVKSLRKAREVRSQLLDILKT---------LKIPLTSSGHD--FDVVRKAIC 1132
++CE + L L+ R QL+D+L+ I + +G D +++R +
Sbjct: 951 EFCERYSLSNPVLKMTDGARRQLIDVLRNQCSFPEDILFDISVNVNGPDRELNLMRSLLV 1010
Query: 1133 SAYFHNAARLKG 1144
A + N A G
Sbjct: 1011 MALYPNVAYYVG 1022
>UNIPROTKB|Q05BE5 [details] [associations]
symbol:DHX33 "DEAH (Asp-Glu-Ala-His) box polypeptide 33,
isoform CRA_c" species:9606 "Homo sapiens" [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR007502 Pfam:PF04408
SMART:SM00847 EMBL:CH471108 GO:GO:0004386 InterPro:IPR011709
Pfam:PF07717 HOGENOM:HOG000175261 EMBL:AC004148 UniGene:Hs.250456
HGNC:HGNC:16718 ChiTaRS:DHX33 EMBL:BC050409 IPI:IPI00789223
SMR:Q05BE5 Ensembl:ENST00000433302 UCSC:uc010clf.3
HOVERGEN:HBG082280 Uniprot:Q05BE5
Length = 483
Score = 520 (188.1 bits), Expect = 7.0e-51, Sum P(2) = 7.0e-51
Identities = 120/324 (37%), Positives = 169/324 (52%)
Query: 891 PK-MGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNL 949
PK G++ L V VS CYRLYTE + + VPEIQR NL
Sbjct: 157 PKDSGLEVLAVQRVSKTQAWQRTGRAGREDSGICYRLYTEDEF-EKFDKMTVPEIQRCNL 215
Query: 950 GNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNVG---ALTDLGWKMVE 1006
+V+ FDFM P ++I ++ QL +LGAL + LT +G KM
Sbjct: 216 ASVMLQLLAMKVPNVLTFDFMSKPSPDHIQAAIAQLDLLGALEHKDDQLTLTPMGRKMAA 275
Query: 1007 FPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAAREKFFVQESDH 1066
FPL+P AK +LM + C +E+LTIVS+LSV SV P R EE R+KF E DH
Sbjct: 276 FPLEPKFAKTILMSPKFHCTEEILTIVSLLSVDSVLHNPPSRREEVQGVRKKFISSEGDH 335
Query: 1067 LTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQLLDILKTLKIPLTSSGHDFDV 1126
+TLL +Y+ +K DWC+E++++ K++ EVR+QL DI + +P+ SS D +
Sbjct: 336 MTLLNIYRTFKNLGGNKDWCKENFVNSKNMTLVAEVRAQLRDICLKMSMPIASSRGDVES 395
Query: 1127 VRKAICSAYFHNAARLKGVGEYINCRNGMPCHLHPSSAIYGLGYTPEYVVYHELILTTKE 1186
VR+ + + F + A L+ G Y P +HPSS ++ P VVY EL+ T K
Sbjct: 396 VRRCLAHSLFMSTAELQPDGTYATTDTHQPVAIHPSSVLFHC--KPACVVYTELLYTNKC 453
Query: 1187 YMQCATAVEPQWLSELGPMFFSVK 1210
YM+ ++ QWL E P +F K
Sbjct: 454 YMRDLCVIDAQWLYEAAPEYFRRK 477
Score = 48 (22.0 bits), Expect = 7.0e-51, Sum P(2) = 7.0e-51
Identities = 10/19 (52%), Positives = 13/19 (68%)
Query: 581 QRQYLPIFSVRDELLQVIR 599
QR+ LPIF R +LL +R
Sbjct: 70 QRRSLPIFQARGQLLAQLR 88
>SGD|S000004411 [details] [associations]
symbol:YLR419W "Putative helicase with limited sequence
similarity to human Rb protein" species:4932 "Saccharomyces
cerevisiae" [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50908 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00591 SMART:SM00847
SGD:S000004411 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
EMBL:BK006945 InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030
Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:U20162
RefSeq:NP_013525.3 GeneID:851140 KEGG:sce:YLR421C KO:K06691
HOGENOM:HOG000167651 OMA:GWARIGV OrthoDB:EOG4Z65WS
RefSeq:NP_013523.3 GeneID:851137 KEGG:sce:YLR419W PIR:S59384
ProteinModelPortal:Q06698 SMR:Q06698 IntAct:Q06698
MINT:MINT-2492948 STRING:Q06698 PaxDb:Q06698 PeptideAtlas:Q06698
PRIDE:Q06698 EnsemblFungi:YLR419W CYGD:YLR419w
GeneTree:ENSGT00680000101018 NextBio:967890 Genevestigator:Q06698
GermOnline:YLR419W Uniprot:Q06698
Length = 1435
Score = 363 (132.8 bits), Expect = 1.4e-50, Sum P(3) = 1.4e-50
Identities = 75/198 (37%), Positives = 120/198 (60%)
Query: 576 KTLAEQRQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNGIVG- 634
K++ R+ LP + + ++ +I +N+ GETGSGK+TQ+ Q++L+ G G
Sbjct: 595 KSMQLVREQLPAWKKQKVIIDIINKNEVVLITGETGSGKSTQVVQFILDFLQKEKGDFGK 654
Query: 635 ----CTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRET 690
CTQPRR++A+ +A+RVS+E G++VGY IR + T ST IK+MT GVL+R
Sbjct: 655 TKIVCTQPRRISAIGLAERVSDERCVTCGEEVGYVIRGVNKTKASTRIKFMTTGVLVRLL 714
Query: 691 LKDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFG 750
+ + ++V+DE HERS+ TD++ ++K ++ R R K+++ SAT+N F FF
Sbjct: 715 QNARTMLENTIVVIDEVHERSIDTDLIVTLMKNLLHRVRGMKIVLMSATVNVDLFKKFFP 774
Query: 751 SVPIFHIPGRTFPVNTLY 768
+ HI GRTFP+ +
Sbjct: 775 GLATCHIEGRTFPITDYF 792
Score = 268 (99.4 bits), Expect = 1.4e-50, Sum P(3) = 1.4e-50
Identities = 83/326 (25%), Positives = 147/326 (45%)
Query: 794 GDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAK 853
G I++F+ G EI C L+++ + E + ++LP++S L + Q ++F+K
Sbjct: 864 GSIIVFLPGVGEINKCC--------NLLANKSNEA-DFMVLPLHSALTPEDQKRVFKKY- 913
Query: 854 EGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXX 913
G RK +V+TNIAETS+T+D IDTG K YNPK L +S
Sbjct: 914 HGKRKVVVSTNIAETSITIDDCVATIDTGRAKSMFYNPKDNTTKLIESFISKAEVKQRRG 973
Query: 914 XXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXF--DFMD 971
Y+L++++ Y N+M+ P+PEI+R L ++ F +D
Sbjct: 974 RAGRVREGLSYKLFSKNLYENDMISMPIPEIKRIPLESLYLSVKAMGIKDVKAFLSTALD 1033
Query: 972 PPPQENILNSMYQLWVLGALNNVG-ALTDLGWKMVEFP-LDPPLAKMLLMGEQLGCLDEV 1029
PP + + L +G ++ +LT LG + P +D K+L+ G GC D
Sbjct: 1034 APPLPALQKAERILTTIGLVDESDKSLTQLGQFISLMPVMDSKHGKLLIYGILFGCTDIS 1093
Query: 1030 LTIVSMLSVPSV-FFRPKDRAEESDAAREKFFVQESDHLTLLYVYQQW---KEHQYRGDW 1085
+ +VS+L + + F + E+ K+ D +L + + + K+ + +
Sbjct: 1094 VLLVSILGIGVLPFIGGFENREKIKKLLCKY-ESRGDLFAVLEIVRDYFKIKDSSIKRKY 1152
Query: 1086 CEEHYLHVKSLRKAREVRSQLLDILK 1111
++ L + + + +Q ILK
Sbjct: 1153 LRDNLLSYNKINEIKSSTAQYYSILK 1178
Score = 85 (35.0 bits), Expect = 1.6e-31, Sum P(3) = 1.6e-31
Identities = 39/191 (20%), Positives = 83/191 (43%)
Query: 970 MDPPPQENILNSMYQLWVLGALNNVG-ALTDLGWKMVEFP-LDPPLAKMLLMGEQLGCLD 1027
+D PP + + L +G ++ +LT LG + P +D K+L+ G GC D
Sbjct: 1032 LDAPPLPALQKAERILTTIGLVDESDKSLTQLGQFISLMPVMDSKHGKLLIYGILFGCTD 1091
Query: 1028 EVLTIVSMLSVPSV-FFRPKDRAEESDAAREKFFVQESDHLTLLYVYQQW---KEHQYRG 1083
+ +VS+L + + F + E+ K+ D +L + + + K+ +
Sbjct: 1092 ISVLLVSILGIGVLPFIGGFENREKIKKLLCKY-ESRGDLFAVLEIVRDYFKIKDSSIKR 1150
Query: 1084 DWCEEHYLHVKSLRKAREVRSQLLDILKTLK-IP----------LTSSGHDFDVVRKAIC 1132
+ ++ L + + + +Q ILK + +P L + +FD++R +
Sbjct: 1151 KYLRDNLLSYNKINEIKSSTAQYYSILKDVGFLPMDYKVGSISDLNRNERNFDILRAILT 1210
Query: 1133 SAYFHNAARLK 1143
A++ + AR++
Sbjct: 1211 GAFYPHIARVQ 1221
Score = 45 (20.9 bits), Expect = 1.4e-50, Sum P(3) = 1.4e-50
Identities = 28/112 (25%), Positives = 49/112 (43%)
Query: 347 YEITESMRLEMEY--NSDRAWYDREEGTTMFDTDSSSFILGDDASYQKK-EVELAKRLVR 403
Y I + L M N + WY ++ F D+ + D+ K +++ K +V
Sbjct: 145 YRIAYNTNLHMMLPPNHRKTWYALDD----FRKDN---LKTDEKRINKLFDLDPFKTMVE 197
Query: 404 KDGSRMSLAQSKKLSQITADNHQWEERQLLRSGAVRGTELSTEFDDEEEHKV 455
R AQ +K Q+ A N+Q ++ Q+ R+ +S+ D +E KV
Sbjct: 198 ---DRKLKAQREK-EQV-AQNNQAQKEQVARTILSSHGGISSSGKDRQERKV 244
Score = 39 (18.8 bits), Expect = 9.2e-27, Sum P(3) = 9.2e-27
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 1205 MFFSVKDSDTSMLEHKKKQKESK 1227
MF++ KD+ T ++E + E K
Sbjct: 947 MFYNPKDNTTKLIESFISKAEVK 969
Score = 39 (18.8 bits), Expect = 4.3e-17, Sum P(2) = 4.3e-17
Identities = 20/91 (21%), Positives = 38/91 (41%)
Query: 562 HMKKGEAVSDFAKSKTLAEQRQYLPIFS-------VRDELLQVIRENQXXXXXGETGSGK 614
H K A+ DF K ++++ +F V D L+ RE + + +
Sbjct: 161 HRKTWYALDDFRKDNLKTDEKRINKLFDLDPFKTMVEDRKLKAQREKEQVA---QNNQAQ 217
Query: 615 TTQLTQYLLED--GYTTNGIVGCTQPRRVAA 643
Q+ + +L G +++G Q R+VA+
Sbjct: 218 KEQVARTILSSHGGISSSG--KDRQERKVAS 246
Score = 39 (18.8 bits), Expect = 1.3e-16, Sum P(3) = 1.3e-16
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 613 GKTTQLTQYLLED 625
G+T +T Y LED
Sbjct: 783 GRTFPITDYFLED 795
>RGD|1307239 [details] [associations]
symbol:Dhx33 "DEAH (Asp-Glu-Ala-His) box polypeptide 33"
species:10116 "Rattus norvegicus" [GO:0000182 "rDNA binding"
evidence=ISO] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0033613 "activating transcription factor binding"
evidence=ISO] [GO:0045943 "positive regulation of transcription
from RNA polymerase I promoter" evidence=ISO] InterPro:IPR007502
Pfam:PF04408 SMART:SM00847 RGD:1307239 GO:GO:0004386
InterPro:IPR011709 Pfam:PF07717 IPI:IPI00952339
Ensembl:ENSRNOT00000068255 UCSC:RGD:1307239 Uniprot:D3ZWE8
Length = 475
Score = 510 (184.6 bits), Expect = 3.1e-50, Sum P(2) = 3.1e-50
Identities = 117/325 (36%), Positives = 172/325 (52%)
Query: 890 NPK-MGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTN 948
+PK G++ L V VS CYRLYTE + ++ PEIQR N
Sbjct: 148 SPKDSGLEVLAVQRVSKTQAWQRTGRAGREDSGICYRLYTEDEF-DKFEKMAAPEIQRCN 206
Query: 949 LGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNVG---ALTDLGWKMV 1005
L +V+ FDFM P ++I ++ QL +LGAL + ALT +G KM
Sbjct: 207 LASVMLQLLAMKVPNVLTFDFMSRPSPDHIEAAIAQLDLLGALEHKDDQLALTPIGRKMA 266
Query: 1006 EFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAAREKFFVQESD 1065
FPL+P AK +L+ + C +E+LTIVS+LSV SV + P R +E + R+KF E D
Sbjct: 267 AFPLEPKFAKTILLSSKFHCTEEILTIVSLLSVDSVLYNPPARRDEVQSVRKKFISSEGD 326
Query: 1066 HLTLLYVYQQWKEHQYRGDWCEEHYLHVKSLRKAREVRSQLLDILKTLKIPLTSSGHDFD 1125
H+TLL +Y+ +K DWC+E++++ K++ EVR+QL DI + +P+ SS D +
Sbjct: 327 HITLLNIYRTFKNIGGNKDWCKENFVNSKNMLLVAEVRAQLRDICLKMSMPIMSSRGDME 386
Query: 1126 VVRKAICSAYFHNAARLKGVGEYINCRNGMPCHLHPSSAIYGLGYTPEYVVYHELILTTK 1185
VR+ + + F + A L+ G Y P +HPSS ++ P VVY L+ T K
Sbjct: 387 SVRRCLAHSLFMSTAELQPDGTYATTDTHQPVAIHPSSVLFHC--KPACVVYTSLLYTNK 444
Query: 1186 EYMQCATAVEPQWLSELGPMFFSVK 1210
YM+ V+ +WL E P +F K
Sbjct: 445 CYMRDLCVVDAEWLYEAAPDYFRRK 469
Score = 52 (23.4 bits), Expect = 3.1e-50, Sum P(2) = 3.1e-50
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 576 KTLAEQRQYLPIFSVRDELLQVIRENQXXXXXGE 609
+ L QR+ LPIF R +LL +R GE
Sbjct: 56 EALELQRRSLPIFRARGQLLAQLRNLDNAVLIGE 89
>UNIPROTKB|Q5THQ9 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR002464
PROSITE:PS00690 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 EMBL:AL023803
UniGene:Hs.444520 HGNC:HGNC:15861 IPI:IPI01009669 SMR:Q5THQ9
Ensembl:ENST00000441485 HOGENOM:HOG000202213 HOVERGEN:HBG079487
Uniprot:Q5THQ9
Length = 302
Score = 533 (192.7 bits), Expect = 3.5e-50, P = 3.5e-50
Identities = 116/251 (46%), Positives = 161/251 (64%)
Query: 620 QYLLEDGYTTNG-IVGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGP-STL 677
+YL E G+T G +VG TQPRRVAA++VA RV+EE LG +VGY IRF+D T +T
Sbjct: 54 KYLAEAGWTAEGRVVGVTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATR 113
Query: 678 IKYMTDGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTS 737
IK++TDG+L+RE + D L KY VI++DEAHER+L TD+ G+LKK+ +R D +LIV S
Sbjct: 114 IKFLTDGMLVREMMVDPLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVAS 173
Query: 738 ATLNAQKFSDFFG----SVP------IFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTI 787
ATL+A KF DFF S P I + GRTFPV+ Y ++P DY+++ V+ + I
Sbjct: 174 ATLDADKFRDFFNQNETSDPARDTCVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVVKI 233
Query: 788 HITSPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAK 847
H T GD+L F+TGQ+E+E L E+ L + + L +LP+Y+ LP+ Q K
Sbjct: 234 HQTEGDGDVLAFLTGQEEVETVVSMLIEQARALARTGMKR--HLRVLPMYAGLPSFEQMK 291
Query: 848 IFEKAKEGTRK 858
+FE+ RK
Sbjct: 292 VFERVSRSVRK 302
>POMBASE|SPBC15C4.05 [details] [associations]
symbol:SPBC15C4.05 "ATP-dependent RNA/DNA helicase
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
PomBase:SPBC15C4.05 GO:GO:0005829 GO:GO:0005524 EMBL:CU329671
GO:GO:0003676 GO:GO:0004003 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 PIR:T39475 RefSeq:NP_595925.1
ProteinModelPortal:O60114 EnsemblFungi:SPBC15C4.05.1 GeneID:2539831
KEGG:spo:SPBC15C4.05 OrthoDB:EOG4TXG12 NextBio:20800979
Uniprot:O60114
Length = 1428
Score = 316 (116.3 bits), Expect = 7.2e-50, Sum P(3) = 7.2e-50
Identities = 95/350 (27%), Positives = 161/350 (46%)
Query: 796 ILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEG 855
+L+F+ G EI +K +E + R + I ++S L + Q +F +G
Sbjct: 906 VLVFLPGISEI----LRVKSLIEDM--PMFRNHRKFCIYMLHSTLSSAQQQSVFNIPPKG 959
Query: 856 TRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXX 915
RK +++TNIAET +T+ + VIDTG + YN + + L VS
Sbjct: 960 CRKIVLSTNIAETGVTIPDVTCVIDTGVHREMRYNSRRHLSRLTDTFVSKANAKQRSGRA 1019
Query: 916 XXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXF--DFMDPP 973
CY L+++ + + L PEI R NL VV +DPP
Sbjct: 1020 GRVQEGICYHLFSKFKHDTQFLSYQTPEILRLNLQEVVLRVKMCQMGDVQDVLGKALDPP 1079
Query: 974 PQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIV 1033
NI+ ++ +L +GAL+ LT LG + + P+D L K+L++G C+D +IV
Sbjct: 1080 SSTNIIRALEKLHQVGALSENEKLTKLGKFLSQLPVDANLGKILVLGCFYKCVDAASSIV 1139
Query: 1034 SMLSVPSVFFRPKDRAEESDAAREKFFVQE--SDHLTLLYVYQQWKE------HQYRGDW 1085
+ML++ S F + D ++ AR F + SD + + Y Y W+E +
Sbjct: 1140 AMLTIGSPFRKSVDNEFSANKARLSFAKENTRSDLVLMYYAYCAWREICLSPLGPDEDSF 1199
Query: 1086 CEEHYLHVKSLRKAREVRSQLLDILKTLKIPLTSSGHDFDVVRKAICSAY 1135
+E YL++++L ++ QLL LK +K+ S ++++IC +
Sbjct: 1200 AKEKYLNLEALSMTESLKIQLLSELKDMKLLGASDVDTCKSLKRSICRRF 1249
Score = 305 (112.4 bits), Expect = 7.2e-50, Sum P(3) = 7.2e-50
Identities = 66/195 (33%), Positives = 112/195 (57%)
Query: 582 RQYLPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLEDGYTTNGI---VGCTQP 638
R LP R+ ++ + +Q G+TG GK+TQ+ +LLE+ T NG + T+P
Sbjct: 628 RNQLPATMFRETIIDAVNNSQLLIISGDTGCGKSTQIPAFLLENS-TKNGKAVKIYVTEP 686
Query: 639 RRVAAMSVAKRVSEEM-----DTELGDKVGYAIRFEDVTGPSTLIKYMTDGVLLRETLKD 693
RR++A+S+A RVS+E+ + VGY++R + P T + Y+T G LR
Sbjct: 687 RRISAISLANRVSQELGGNPPSARSHELVGYSVRLDSKCTPLTPLTYVTTGTFLRLLEVG 746
Query: 694 SDLDKYRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVP 753
++++ +++DE HERS+ +D+L + ++ + K+I+ SATLNA+KF +F
Sbjct: 747 NEIESVTHLIIDEVHERSIDSDLLLIHVLHLLKQHPHLKIIIMSATLNAEKFQLYFEGSN 806
Query: 754 IFHIPGRTFPVNTLY 768
+ IPG+T+PV+ Y
Sbjct: 807 LITIPGKTYPVHRFY 821
Score = 50 (22.7 bits), Expect = 7.2e-50, Sum P(3) = 7.2e-50
Identities = 31/143 (21%), Positives = 57/143 (39%)
Query: 441 TELSTEFDDEEEHKVILLVHDTKPPFLDGRIVFTKQAEPVMPIKDPTSDMAIISRKGSAL 500
T+ S + DD + K D+KP L V T+ E +P DP + S+
Sbjct: 258 TQPSNQVDDSLKSK------DSKP--LTMSEVLTQLPEDDIPFDDPFD---LTSQYVKVK 306
Query: 501 VREIREKQTQNKSRQRFWELAGSQMGNILGVKKTAEQVDADTAVVGEQGEIDFREDAKFS 560
++ +R + K+ + F L Q+ +I + + + +V + I+F K
Sbjct: 307 LKMLRLQIANKKNSEEFSTL-NLQLESITSQYLFSSK---EAEIVFRKSRIEFMNKLKAL 362
Query: 561 QHMKKGEAVSDFAKSKTLAEQRQ 583
Q + E + + K + E Q
Sbjct: 363 QQKLENERIVEEIKKNGIQEDSQ 385
Score = 46 (21.3 bits), Expect = 1.9e-49, Sum P(3) = 1.9e-49
Identities = 19/84 (22%), Positives = 37/84 (44%)
Query: 342 SEEHNYEITESMRLEMEYNSDRAWYDREEGTTMFDTDSSSFILGDDASYQKKEVELAKRL 401
+ + N E ++ L++E + + + +E +F F+ A QK E E
Sbjct: 315 ANKKNSEEFSTLNLQLESITSQYLFSSKEAEIVFRKSRIEFMNKLKALQQKLENERIVEE 374
Query: 402 VRKDGSRMSLAQSKKLSQITADNH 425
++K+G + +QS S DN+
Sbjct: 375 IKKNGIQED-SQSTDDSSKDDDNN 397
Score = 38 (18.4 bits), Expect = 1.3e-48, Sum P(3) = 1.3e-48
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 326 RESSQSFEDGVADETYSEEHN 346
+E SQS +D D+ + E N
Sbjct: 381 QEDSQSTDDSSKDDDNNSESN 401
>UNIPROTKB|F1P1F4 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9031 "Gallus gallus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0042645
"mitochondrial nucleoid" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0042645
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 IPI:IPI00593383 OMA:LHKEERY EMBL:AADN02000053
Ensembl:ENSGALT00000008045 Uniprot:F1P1F4
Length = 1231
Score = 550 (198.7 bits), Expect = 2.5e-49, P = 2.5e-49
Identities = 161/530 (30%), Positives = 256/530 (48%)
Query: 585 LPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLE----DGYTTNGIVGCTQPRR 640
LP+ +D +L I +N G+TG GKTT++ Q LLE +G V TQPRR
Sbjct: 478 LPVDPHKDTILSAIEQNPVVVIAGDTGCGKTTRIPQLLLEHYILEGRGARCNVVITQPRR 537
Query: 641 VAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPST--LIKYMTDGVLLRETLKDSDLDK 698
++A+SVA+RV++E+ + VGY +R E P+ + + T G+LLR+ + L+
Sbjct: 538 ISAISVAQRVAQELGPNMRKNVGYQVRLESKP-PARGGALLFCTVGILLRKLQGNPSLEG 596
Query: 699 YRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPIFHIP 758
+V+DE HER ++TD L +LK + D +L++ SAT + Q+FS +FG P+ +P
Sbjct: 597 VSHVVVDEVHERDVNTDFLLILLKGIQKLNPDLRLVLMSATGDNQRFSHYFGDCPVVKVP 656
Query: 759 GRTFPVNTLY-----SKTPCEDYVEAAVKQAMTIHITSPP--GDILIFMTGQDEIEAA-C 810
G +PV Y +K + +KQ+ + D+++ + E C
Sbjct: 657 GFMYPVKEYYLEEILAKLGRHRHRHYEIKQSDDECVLDLDLITDLVLQIDAHGEPGGILC 716
Query: 811 FA-----LKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNI 865
F +K ++L+ + L+LP++S +P Q IF++ G RK ++ATNI
Sbjct: 717 FLPGWQEIKGVQQRLLEMLGSQNSRYLVLPVHSNIPMMDQQNIFQRPPPGVRKIVLATNI 776
Query: 866 AETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYR 925
AETS+T++ I +V+D+G K + Y+ K + L+ VS Y
Sbjct: 777 AETSITINDIVHVVDSGTHKEERYDLKTKVSCLETVWVSKSNVVQRRGRAGRCQSGFAYH 836
Query: 926 LYTESAYLNEMLPSPVPEIQRTNLGN-VVXXXXXXXXXXXXXF--DFMDPPPQENILNSM 982
L+ S L++M VPEI RT L N VV F +D P + + ++
Sbjct: 837 LFPRSR-LDKMPTYQVPEILRTPLENLVVQAKIHMPEKTAVEFLSKALDSPDIKAVDEAV 895
Query: 983 YQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVF 1042
L +G L+ ALT LG ++ + DP LAK +++ CL +L IVS L+
Sbjct: 896 ILLQEIGVLDQREALTTLGKRLAQISTDPRLAKAIVLASIYRCLHPLLVIVSCLTRDPFS 955
Query: 1043 FRPKDRAEESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGDW-CEEHYL 1091
++RAE A SDHL + W+E R D ++YL
Sbjct: 956 SSLQNRAEVDKAKAVLSRESGSDHLAFVRAVAGWEEVLRRRDSRARDNYL 1005
Score = 326 (119.8 bits), Expect = 3.8e-25, P = 3.8e-25
Identities = 105/362 (29%), Positives = 169/362 (46%)
Query: 793 PGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKA 852
PG IL F+ G EI+ +++R+ +++ S L+LP++S +P Q IF++
Sbjct: 711 PGGILCFLPGWQEIKG----VQQRLLEMLGSQNSRY---LVLPVHSNIPMMDQQNIFQRP 763
Query: 853 KEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXX 912
G RK ++ATNIAETS+T++ I +V+D+G K + Y+ K + L+ VS
Sbjct: 764 PPGVRKIVLATNIAETSITINDIVHVVDSGTHKEERYDLKTKVSCLETVWVSKSNVVQRR 823
Query: 913 XXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGN-VVXXXXXXXXXXXXXF--DF 969
Y L+ S L++M VPEI RT L N VV F
Sbjct: 824 GRAGRCQSGFAYHLFPRSR-LDKMPTYQVPEILRTPLENLVVQAKIHMPEKTAVEFLSKA 882
Query: 970 MDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEV 1029
+D P + + ++ L +G L+ ALT LG ++ + DP LAK +++ CL +
Sbjct: 883 LDSPDIKAVDEAVILLQEIGVLDQREALTTLGKRLAQISTDPRLAKAIVLASIYRCLHPL 942
Query: 1030 LTIVSMLSVPSVFFRPKDRAEESDAAREKFFVQESDHLTLLYVYQQWKE------HQYRG 1083
L IVS L+ ++RAE A SDHL + W+E + R
Sbjct: 943 LVIVSCLTRDPFSSSLQNRAEVDKAKAVLSRESGSDHLAFVRAVAGWEEVLRRRDSRARD 1002
Query: 1084 DWCEEHYLHVKSLRKAREVRSQLLDILKTLKIPLTSSGHDFDVVRKAICSAYFHNAARLK 1143
++ +++YL+ SLR + Q + L + L SS D + ++C+ Y +K
Sbjct: 1003 NYLQDYYLYGPSLRFINGLVKQFSENL--YEAFLVSSPSDC-TMPSSVCNQYSEEEELVK 1059
Query: 1144 GV 1145
GV
Sbjct: 1060 GV 1061
>UNIPROTKB|Q5ZI74 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9031 "Gallus gallus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0042645
"mitochondrial nucleoid" evidence=ISS] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003682
GO:GO:0042645 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OrthoDB:EOG4VHK5M EMBL:AJ720910 IPI:IPI00593383
RefSeq:NP_001012869.1 UniGene:Gga.2762 ProteinModelPortal:Q5ZI74
SMR:Q5ZI74 GeneID:420376 KEGG:gga:420376 InParanoid:Q5ZI74
NextBio:20823291 Uniprot:Q5ZI74
Length = 1231
Score = 550 (198.7 bits), Expect = 2.5e-49, P = 2.5e-49
Identities = 161/530 (30%), Positives = 256/530 (48%)
Query: 585 LPIFSVRDELLQVIRENQXXXXXGETGSGKTTQLTQYLLE----DGYTTNGIVGCTQPRR 640
LP+ +D +L I +N G+TG GKTT++ Q LLE +G V TQPRR
Sbjct: 478 LPVDPHKDTILSAIEQNPVVVIAGDTGCGKTTRIPQLLLEHYILEGRGARCNVVITQPRR 537
Query: 641 VAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPST--LIKYMTDGVLLRETLKDSDLDK 698
++A+SVA+RV++E+ + VGY +R E P+ + + T G+LLR+ + L+
Sbjct: 538 ISAISVAQRVAQELGPNMRKNVGYQVRLESKP-PARGGALLFCTVGILLRKLQGNPSLEG 596
Query: 699 YRVIVMDEAHERSLSTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPIFHIP 758
+V+DE HER ++TD L +LK + D +L++ SAT + Q+FS +FG P+ +P
Sbjct: 597 VSHVVVDEVHERDVNTDFLLILLKGIQKLNPDLRLVLMSATGDNQRFSHYFGGCPVVKVP 656
Query: 759 GRTFPVNTLY-----SKTPCEDYVEAAVKQAMTIHITSPP--GDILIFMTGQDEIEAA-C 810
G +PV Y +K + +KQ+ + D+++ + E C
Sbjct: 657 GFMYPVKEYYLEEILAKLGRHRHRHYEIKQSDDECVLDLDLITDLVLQIDAHGEPGGILC 716
Query: 811 FA-----LKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNI 865
F +K ++L+ + L+LP++S +P Q IF++ G RK ++ATNI
Sbjct: 717 FLPGWQEIKGVQQRLLEMLGSQNSRYLVLPVHSNIPMMDQQNIFQRPPPGVRKIVLATNI 776
Query: 866 AETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYR 925
AETS+T++ I +V+D+G K + Y+ K + L+ VS Y
Sbjct: 777 AETSITINDIVHVVDSGTHKEERYDLKTKVSCLETVWVSKSNVVQRRGRAGRCQSGFAYH 836
Query: 926 LYTESAYLNEMLPSPVPEIQRTNLGN-VVXXXXXXXXXXXXXF--DFMDPPPQENILNSM 982
L+ S L++M VPEI RT L N VV F +D P + + ++
Sbjct: 837 LFPRSR-LDKMPTYQVPEILRTPLENLVVQAKIHMPEKTAVEFLSKALDSPDIKAVDEAV 895
Query: 983 YQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVF 1042
L +G L+ ALT LG ++ + DP LAK +++ CL +L IVS L+
Sbjct: 896 ILLQEIGVLDQREALTTLGKRLAQISTDPRLAKAIVLASIYRCLHPLLVIVSCLTRDPFS 955
Query: 1043 FRPKDRAEESDAAREKFFVQESDHLTLLYVYQQWKEHQYRGDW-CEEHYL 1091
++RAE A SDHL + W+E R D ++YL
Sbjct: 956 SSLQNRAEVDKAKAVLSRESGSDHLAFVRAVAGWEEVLRRRDSRARDNYL 1005
Score = 326 (119.8 bits), Expect = 3.8e-25, P = 3.8e-25
Identities = 105/362 (29%), Positives = 169/362 (46%)
Query: 793 PGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKA 852
PG IL F+ G EI+ +++R+ +++ S L+LP++S +P Q IF++
Sbjct: 711 PGGILCFLPGWQEIKG----VQQRLLEMLGSQNSRY---LVLPVHSNIPMMDQQNIFQRP 763
Query: 853 KEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXX 912
G RK ++ATNIAETS+T++ I +V+D+G K + Y+ K + L+ VS
Sbjct: 764 PPGVRKIVLATNIAETSITINDIVHVVDSGTHKEERYDLKTKVSCLETVWVSKSNVVQRR 823
Query: 913 XXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGN-VVXXXXXXXXXXXXXF--DF 969
Y L+ S L++M VPEI RT L N VV F
Sbjct: 824 GRAGRCQSGFAYHLFPRSR-LDKMPTYQVPEILRTPLENLVVQAKIHMPEKTAVEFLSKA 882
Query: 970 MDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEV 1029
+D P + + ++ L +G L+ ALT LG ++ + DP LAK +++ CL +
Sbjct: 883 LDSPDIKAVDEAVILLQEIGVLDQREALTTLGKRLAQISTDPRLAKAIVLASIYRCLHPL 942
Query: 1030 LTIVSMLSVPSVFFRPKDRAEESDAAREKFFVQESDHLTLLYVYQQWKE------HQYRG 1083
L IVS L+ ++RAE A SDHL + W+E + R
Sbjct: 943 LVIVSCLTRDPFSSSLQNRAEVDKAKAVLSRESGSDHLAFVRAVAGWEEVLRRRDSRARD 1002
Query: 1084 DWCEEHYLHVKSLRKAREVRSQLLDILKTLKIPLTSSGHDFDVVRKAICSAYFHNAARLK 1143
++ +++YL+ SLR + Q + L + L SS D + ++C+ Y +K
Sbjct: 1003 NYLQDYYLYGPSLRFINGLVKQFSENL--YEAFLVSSPSDC-TMPSSVCNQYSEEEELVK 1059
Query: 1144 GV 1145
GV
Sbjct: 1060 GV 1061
WARNING: HSPs involving 66 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.132 0.383 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1283 1198 0.00097 123 3 11 22 0.43 34
39 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 316
No. of states in DFA: 626 (67 KB)
Total size of DFA: 523 KB (2240 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 115.44u 0.14s 115.58t Elapsed: 00:00:05
Total cpu time: 115.55u 0.14s 115.69t Elapsed: 00:00:05
Start: Tue May 21 10:01:13 2013 End: Tue May 21 10:01:18 2013
WARNINGS ISSUED: 2