Your job contains 1 sequence.
>000792
MGGYDSGSASKDGRDEDDEEEYEDVSGGNRLLGFMFGNVDYAGDLDVDYLDEDAKEHLAA
VADKLGPSLTDIDVWNSQSCFQLFCSYCLLSVNSPQPPVDAVEQDYDKKAEDAVDYEDID
EQYEGPEIQIASEEDYLLPKKEYFAAEVSLAALKPTASPFDDENYDEDEELEKEHEEVDK
ETEDTTTILSGEQVECATAVPDGEKSPEGDPQVGSLGAEEEMTAGVKDYDEELADILKGP
LDGQVSTPLPVLCVEDGKVILRFSEIFGIHEPLKKGKKRDQRYSTPKDKYNTMDVSSLVE
EDEEVYLKGSGQGFPLFKEANIFQHGIFSLNDDDSELVKFGVEQDAATISEHDEQRKDSC
ICSEPMKEESNVNPSVGWKSMPSPNFFPLDQHDWEENIVWDNSPAASDNSIESHEIAGAD
VESALMRGIELDTGQNNFHERSTSPNEKDCIVNMQNSPVLSETFGSKSSSDNTSHLFTES
RYHPQLLRLESQLDLDNHSHANGIKENVSIKLCQSDAVKRFSKHSLQNRDMMEGSWLDNI
IWEPVDAVGKPKLILDLQDEQMLFEILDNKDDEHPLLHAGAMIITRSAKPSDFKPAESVK
LFYLGKELEDHKSLADQNVRPNSLIHLIRTKIHLLPRAQKLPGENKSLRPPGAFKKKSDL
SVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLTLE
PGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRRIDKVAVV
AQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLSEA
IIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRLKH
LGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENIER
LEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLRRLSMEAA
REVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASGVQLQQQTRGKCQEIWDRQVQSLS
AADDDEIGSDSEHSDLDSFAGDLENLLDAEEFEEEESNYDTKHDKVEGVKGLKMRRRPIQ
VQAEEEIEDEAAEAAELCRLLMDDDEAELKKKKKKTKAQVEGGLSLAKSISGLEIVERLK
KANKPAKHIAITVQPNGSHTANEQIKDPKEEESLIAKRNLSGKVQAMKKNNVQGEKIIKG
DFCLWSLWSAWTHEDQQKLPQI
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 000792
(1282 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2035574 - symbol:HAF01 "AT1G32750" species:370... 1795 1.2e-253 3
TAIR|locus:2085909 - symbol:HAF2 "AT3G19040" species:3702... 1802 2.9e-251 2
DICTYBASE|DDB_G0292242 - symbol:taf1 "transcription initi... 651 4.3e-69 5
MGI|MGI:1336878 - symbol:Taf1 "TAF1 RNA polymerase II, TA... 445 1.6e-68 5
RGD|1562050 - symbol:Taf1 "TAF1 RNA polymerase II, TATA b... 444 4.7e-68 5
UNIPROTKB|Q60544 - symbol:TAF1 "Transcription initiation ... 448 6.0e-68 5
UNIPROTKB|P21675 - symbol:TAF1 "Transcription initiation ... 448 1.0e-67 5
UNIPROTKB|B1Q2X3 - symbol:N-TAF1 "TAF1 RNA polymerase II,... 448 1.1e-67 5
UNIPROTKB|F1MF62 - symbol:TAF1 "Uncharacterized protein" ... 448 1.3e-67 5
ZFIN|ZDB-GENE-030131-5576 - symbol:taf1 "TAF1 RNA polymer... 443 1.5e-67 5
UNIPROTKB|Q8IZX4 - symbol:TAF1L "Transcription initiation... 440 5.1e-67 5
UNIPROTKB|E2QSZ4 - symbol:TAF1 "Uncharacterized protein" ... 448 2.2e-66 5
UNIPROTKB|J9NZ21 - symbol:TAF1 "Uncharacterized protein" ... 448 2.7e-66 5
UNIPROTKB|F6UPV2 - symbol:TAF1 "Uncharacterized protein" ... 446 6.5e-66 5
UNIPROTKB|I3LP77 - symbol:I3LP77 "Uncharacterized protein... 448 4.5e-63 5
FB|FBgn0010355 - symbol:Taf1 "TBP-associated factor 1" sp... 573 2.7e-55 6
UNIPROTKB|F1P5U7 - symbol:TAF1 "Uncharacterized protein" ... 441 6.7e-46 5
UNIPROTKB|F1P5U8 - symbol:TAF1 "Uncharacterized protein" ... 441 7.7e-46 5
WB|WBGene00006382 - symbol:taf-1 species:6239 "Caenorhabd... 351 2.2e-44 6
UNIPROTKB|G5EGM3 - symbol:taf-1 "Protein TAF-1" species:6... 351 2.2e-44 6
POMBASE|SPAC2G11.14 - symbol:taf111 "transcription factor... 342 4.9e-27 2
ASPGD|ASPL0000011251 - symbol:AN3907 species:162425 "Emer... 311 6.3e-26 5
SGD|S000003506 - symbol:TAF1 "TFIID subunit (145 kDa)" sp... 300 1.4e-22 2
>TAIR|locus:2035574 [details] [associations]
symbol:HAF01 "AT1G32750" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0004402 "histone acetyltransferase
activity" evidence=ISS] [GO:0009294 "DNA mediated transformation"
evidence=IMP] [GO:0000394 "RNA splicing, via endonucleolytic
cleavage and ligation" evidence=RCA] [GO:0006366 "transcription
from RNA polymerase II promoter" evidence=RCA] InterPro:IPR000626
InterPro:IPR001487 Pfam:PF00240 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 SMART:SM00213 SMART:SM00297 Prosite:PS00299
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0006355
GO:GO:0006351 GO:GO:0016568 EMBL:AC017118 InterPro:IPR019955
PROSITE:PS50053 GO:GO:0009294 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 eggNOG:COG5076 InterPro:IPR018359 HSSP:Q91888
KO:K03125 InterPro:IPR022591 Pfam:PF12157 EMBL:AF510669
IPI:IPI00524275 PIR:D86452 RefSeq:NP_174552.1 UniGene:At.40077
UniGene:At.48257 ProteinModelPortal:Q8LRK9 SMR:Q8LRK9 IntAct:Q8LRK9
STRING:Q8LRK9 PaxDb:Q8LRK9 PRIDE:Q8LRK9 EnsemblPlants:AT1G32750.1
GeneID:840169 KEGG:ath:AT1G32750 TAIR:At1g32750
HOGENOM:HOG000030311 InParanoid:Q8LRK9 OMA:IANFHRP PhylomeDB:Q8LRK9
ProtClustDB:CLSN2682826 Genevestigator:Q8LRK9 Gene3D:1.10.1100.10
InterPro:IPR009067 Pfam:PF09247 SUPFAM:SSF47055 Uniprot:Q8LRK9
Length = 1919
Score = 1795 (636.9 bits), Expect = 1.2e-253, Sum P(3) = 1.2e-253
Identities = 407/731 (55%), Positives = 493/731 (67%)
Query: 389 LDQHDWEENIVWDNSPAASDNSIESHEIAGADVESALMRGIELDTGQN-NFHERSTSPNE 447
L W ++I+WD+ S + + I E + + + +N H +
Sbjct: 502 LGDEAWLDSIIWDSEKELSRSKL----IFDLQDEQMVFEIFDNEESKNLQLHAGAM---- 553
Query: 448 KDCIVNMQNSPVLSETF--GSKSSSDNTSHLFTESRYHPQLLRLESQLDLDNHSHANGIK 505
IV+ ++S ETF G +S+S +L + Y + +S L AN K
Sbjct: 554 ---IVS-RSSKSKDETFQEGCESNSGWQFNLSNDKFY----MNGKSSQQLQ----ANTNK 601
Query: 506 ENV-SIKLCQS-DAVK-RFSKHSLQNRDMMEGSWLDNIIWEPVD---AVGKPKLILDLQD 559
+V S+++ S A+K + K L N+D+ +W P D A+ + +
Sbjct: 602 SSVHSLRVFHSVPAIKLQTMKSKLSNKDIANFH-RPKALWYPHDNELAIKQQGKLPTRGS 660
Query: 560 EQMLFEILDNKDDEHPLLHAGA--MIITRSAKPS---DFKPAESVKLFYLGKELEDHKSL 614
+++ + L K + LH G + + AK S DFK E+VK+FY GKEL+D KSL
Sbjct: 661 MKIIVKSLGGKGSK---LHVGIEESVSSLRAKASRKLDFKETEAVKMFYKGKELDDEKSL 717
Query: 615 ADQNVRPNSLIHLIRTKIHLLPRAQKLPGENKSLRPPGAFKKKSDLSVKDGHVFLMEYCE 674
A QNV+PNSL+HLIRTK+HL P AQKLPGENKSLRPPGAFKKKSDLS KDGHVFLMEYCE
Sbjct: 718 AAQNVQPNSLVHLIRTKVHLWPWAQKLPGENKSLRPPGAFKKKSDLSTKDGHVFLMEYCE 777
Query: 675 ERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLTLEPGDKSPFLGDIKAG 734
ERPL+LSNAGMGANLCTYYQKSSP DQ G LL + ++ LGNV+ LEPGDKSPFLG+I AG
Sbjct: 778 ERPLMLSNAGMGANLCTYYQKSSPEDQRGNLLRNQSDTLGNVMILEPGDKSPFLGEIHAG 837
Query: 735 CSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRRIDKVAVVAQQEPLMEVMSPGS 794
CSQSS+ETNMY+AP+F ++ +TD+LLVRS KGK+S+RRIDK+ VV QQEP MEVMSPGS
Sbjct: 838 CSQSSVETNMYKAPIFPQRLQSTDYLLVRSPKGKLSLRRIDKIVVVGQQEPRMEVMSPGS 897
Query: 795 KNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLSEAIIRKKLKECAFLRR 854
KNLQTY +NRMLV VYREF G P I DELS F NL++AII+K +K A +R
Sbjct: 898 KNLQTYLVNRMLVYVYREFFKRGG-GEHP-IAADELSFLFSNLTDAIIKKNMKIIACWKR 955
Query: 855 DGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRLKHLGITQLTLPASISS 914
D NG+ W+ K + P E +L+KL PEHVCSYESM AGLYRLKHLGIT+ TLPASIS+
Sbjct: 956 DKNGQSYWTKKDSLLEPPESELKKLVAPEHVCSYESMLAGLYRLKHLGITRFTLPASISN 1015
Query: 915 AMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGL 974
A++QLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDR NIERLEITGVGDPSGRGL
Sbjct: 1016 ALAQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRANIERLEITGVGDPSGRGL 1075
Query: 975 GFSYVRXXXXXXXXXXXXXXXXXXNRGGSTVTGTDADLRRLSMEAAREVLLKFNVPEEMI 1034
GFSYVR RG TVTGTDADLRRLSMEAAREVL+KFNVP+E+I
Sbjct: 1076 GFSYVRAAPKAPAAAGHMKKKAAAGRGAPTVTGTDADLRRLSMEAAREVLIKFNVPDEII 1135
Query: 1035 AKQTRWHRIAMIRKLSSEQAASGVQLQQQTRGKC---QEIWDRQVQSLSAADDDEIGSDS 1091
AKQTRWHRIAMIRKLSSEQAASGV++ T GK Q + Q+Q + EI D
Sbjct: 1136 AKQTRWHRIAMIRKLSSEQAASGVKVDPTTIGKYARGQRMSFLQMQQQAREKCQEIW-DR 1194
Query: 1092 EHSDLDSFAGD 1102
+ L +F GD
Sbjct: 1195 QLLSLSAFDGD 1205
Score = 823 (294.8 bits), Expect = 6.6e-107, Sum P(2) = 6.6e-107
Identities = 220/567 (38%), Positives = 314/567 (55%)
Query: 90 LSVNSPQPPVDAVEQDYDKKAEDAVDYEDIDEQYEGPEIQIASEEDYLLPKKEYFAAEVS 149
L S + D EQDYD+KAEDAVDYEDIDE+Y+GPE+Q+ SEED+LLPKKEYF+ V+
Sbjct: 72 LLAKSERTASDPAEQDYDRKAEDAVDYEDIDEEYDGPEVQVVSEEDHLLPKKEYFSTAVA 131
Query: 150 LAALKPTASPFXXXXXXXXXXXXXXXXXXXXXXXXXXXILSGEQVECATAVPDGEKSPEG 209
L +LK AS F L E+ E D K+ E
Sbjct: 132 LGSLKSRASVFDDEDYDEEEEQEEEQAPVEKS-------LETEKREPVVLKED--KALEY 182
Query: 210 DPQVGSLGAEEEM-TAGVKDYDEELADILKGPLDGQVSTPLPVLCVEDGKVILRFSEIFG 268
+ + L E+ M T V++ EE+ ++L+G LD + +TPLP L VEDG VIL+FSEIF
Sbjct: 183 EEEASILDKEDHMDTEDVQE--EEVDELLEGTLDDKGATPLPTLYVEDGMVILQFSEIFA 240
Query: 269 IHEPLKKGKKRDQRYSTPKDKYNTMXXXXXXXXXXXXYLKGSGQGFPLFKEANIFQHGI- 327
IHEP +K +R+ RY T +DKY +M LK G+ ++A++ Q +
Sbjct: 241 IHEPPQKRDRRENRYVTCRDKYKSMDISELVEDDEEVLLKSHGRIDTHVEQADLIQLDVP 300
Query: 328 FSLNDDDSELVKFGVEQDAATIS-EHDEQRKDSCICSEPMKEESNVNPSVGWKSMPSPNF 386
F + + +LVK S E + +DSCI E +K++ + S +S S
Sbjct: 301 FPIREG-LQLVKASTIGGITPESREFTKLGRDSCIMGELLKQDFIDDNSSLCQSQLSMQV 359
Query: 387 FPLDQHDWEENIVWDNSPAASDNSIESHEIAGADVESALMRGIELDTGQNNFHE-RSTSP 445
FPLDQH+WE I+W++SP S NS E E G + E L++G +T Q + + S
Sbjct: 360 FPLDQHEWERRIIWEHSPEISGNSGEIFE-PGLEPEGMLVKGTNSETEQESLNVVNSRVQ 418
Query: 446 NEKDCIVNMQNSPVLSETFGSKSSSDNTSHLFTESRYHPQLLRLESQLDLDNHSHAN--- 502
+ D + + S L E+FGS+ S +T+ +SR+HPQLLRLESQ D +NH N
Sbjct: 419 VQADNNMFVPFSANLLESFGSRGSQ-STNESTNKSRHHPQLLRLESQWD-ENHLSGNDEA 476
Query: 503 GIKENVSIKLCQSDAVKRFSKHSLQNRDMMEGSWLDNIIWEPVDAVGKPKLILDLQDEQM 562
G+K+ IK + DA+ RFS+ L+ RD+ + +WLD+IIW+ + + KLI DLQDEQM
Sbjct: 477 GVKK---IKRLEKDALGRFSRLVLRERDLGDEAWLDSIIWDSEKELSRSKLIFDLQDEQM 533
Query: 563 LFEILDNKDDEHPLLHAGAMIITRSAKPSD--FKPA-ESVK--LFYLGKELEDHKSLADQ 617
+FEI DN++ ++ LHAGAMI++RS+K D F+ ES F L + + Q
Sbjct: 534 VFEIFDNEESKNLQLHAGAMIVSRSSKSKDETFQEGCESNSGWQFNLSNDKFYMNGKSSQ 593
Query: 618 NVRPN---SLIHLIRTKIHLLPRAQKL 641
++ N S +H +R H +P A KL
Sbjct: 594 QLQANTNKSSVHSLRV-FHSVP-AIKL 618
Score = 374 (136.7 bits), Expect = 1.2e-253, Sum P(3) = 1.2e-253
Identities = 78/129 (60%), Positives = 93/129 (72%)
Query: 32 LGFMFGNVDYAGDLDVDYLDEDAKEHLAAVADKLGPSLTDIDVWNSQSCFQLFCSYCLLS 91
LGF+FGNVD +GDLD DYLDEDAKEHL+A+ADKLG SL DI+ L
Sbjct: 30 LGFIFGNVDNSGDLDADYLDEDAKEHLSALADKLGSSLPDIN----------------LL 73
Query: 92 VNSPQPPVDAVEQDYDKKAEDAVDYEDIDEQYEGPEIQIASEEDYLLPKKEYFAAEVSLA 151
S + D EQDYD+KAEDAVDYEDIDE+Y+GPE+Q+ SEED+LLPKKEYF+ V+L
Sbjct: 74 AKSERTASDPAEQDYDRKAEDAVDYEDIDEEYDGPEVQVVSEEDHLLPKKEYFSTAVALG 133
Query: 152 ALKPTASPF 160
+LK AS F
Sbjct: 134 SLKSRASVF 142
Score = 314 (115.6 bits), Expect = 1.2e-253, Sum P(3) = 1.2e-253
Identities = 84/217 (38%), Positives = 115/217 (52%)
Query: 1046 IRKLSSEQAASGVQLQQQTRGKCQEIWDRQVQSLSAADDDEIGSDSE-HSDLDSFAGDXX 1104
I K + Q S +Q+QQQ R KCQEIWDRQ+ SLSA D DE S++E +SDLDSFAGD
Sbjct: 1166 IGKYARGQRMSFLQMQQQAREKCQEIWDRQLLSLSAFDGDENESENEANSDLDSFAGDLE 1225
Query: 1105 XXXXXXXXXXXXSNYDTKHDKVEGVKGLKMRRRPIQVQXXXXXXXXXXXXXXLCRLLMDD 1164
+ +K+DK++GVKGLKMRRRP QV+ LCRLLM D
Sbjct: 1226 NLLDAEEGGEGEESNISKNDKLDGVKGLKMRRRPSQVETDEEIEDEATEYAELCRLLMQD 1285
Query: 1165 DEAELXXXXXXXXAQVEGGLSLAKSISGLEIVERLKKANKPAKHIAITVQPNGSHTANEQ 1224
++ + + G + L+ E ++KAN K I +QP+ S NE
Sbjct: 1286 EDQKKKKKKMKGVGEGMGSYPPPRPNIALQSGEPVRKANAMDKK-PIAIQPDASFLVNES 1344
Query: 1225 -IKDPKEEESLIAKRNLSGKVQAMKKNNVQGE-KIIK 1259
IKD + +S+I + GK Q + +N G+ K +K
Sbjct: 1345 TIKDNRNVDSII--KTPKGK-QVKENSNSLGQLKKVK 1378
Score = 55 (24.4 bits), Expect = 1.6e-29, Sum P(3) = 1.6e-29
Identities = 30/128 (23%), Positives = 54/128 (42%)
Query: 325 HGIFSLNDDDSELVKFGVEQDAATISEHDEQRKDSCICSEPMKEESNVNPSVGW-KSMPS 383
H I + SE GV+ D TI ++ ++ S + M++++ W + + S
Sbjct: 1142 HRIAMIRKLSSEQAASGVKVDPTTIGKYARGQRMSFL---QMQQQAREKCQEIWDRQLLS 1198
Query: 384 PNFFPLDQHDWEENIVWDNSPAASD--NSIESHEIAGADVESALMRGIELDTGQNNFHER 441
+ F D+++ E D A D N +++ E G ES + + +LD + R
Sbjct: 1199 LSAFDGDENESENEANSDLDSFAGDLENLLDAEE-GGEGEESNISKNDKLDGVKGLKMRR 1257
Query: 442 STSPNEKD 449
S E D
Sbjct: 1258 RPSQVETD 1265
Score = 49 (22.3 bits), Expect = 6.0e-79, Sum P(2) = 6.0e-79
Identities = 11/47 (23%), Positives = 23/47 (48%)
Query: 828 DELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEG 874
D L + + + IR K+++ + R+ VW +K H+ ++G
Sbjct: 1835 DYLDIVENPMDLSTIRDKVRKIEYRNREQFRHDVWQIKYNAHLYNDG 1881
>TAIR|locus:2085909 [details] [associations]
symbol:HAF2 "AT3G19040" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0004402 "histone acetyltransferase
activity" evidence=ISS] [GO:0003712 "transcription cofactor
activity" evidence=TAS] [GO:0005669 "transcription factor TFIID
complex" evidence=TAS] [GO:0009416 "response to light stimulus"
evidence=IEP] [GO:0016573 "histone acetylation" evidence=IMP]
[GO:0016020 "membrane" evidence=IDA] [GO:0000394 "RNA splicing, via
endonucleolytic cleavage and ligation" evidence=RCA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=RCA]
InterPro:IPR000626 InterPro:IPR001487 Pfam:PF00240 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 SMART:SM00213 SMART:SM00297
Prosite:PS00299 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0016020 GO:GO:0006355 GO:GO:0016573 GO:GO:0006351
GO:GO:0009416 GO:GO:0003712 InterPro:IPR019955 PROSITE:PS50053
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 eggNOG:COG5076
InterPro:IPR018359 EMBL:AP000735 GO:GO:0005669 HSSP:Q91888
KO:K03125 InterPro:IPR022591 Pfam:PF12157 HOGENOM:HOG000030311
ProtClustDB:CLSN2682826 EMBL:AY579213 IPI:IPI00527667
RefSeq:NP_188534.2 UniGene:At.50197 ProteinModelPortal:Q6PUA2
SMR:Q6PUA2 STRING:Q6PUA2 EnsemblPlants:AT3G19040.1 GeneID:821437
KEGG:ath:AT3G19040 TAIR:At3g19040 InParanoid:Q6PUA2 OMA:DGNESEN
PhylomeDB:Q6PUA2 Genevestigator:Q6PUA2 Uniprot:Q6PUA2
Length = 1786
Score = 1802 (639.4 bits), Expect = 2.9e-251, Sum P(2) = 2.9e-251
Identities = 415/795 (52%), Positives = 507/795 (63%)
Query: 502 NGIKENV-SIKLCQS-DAVK-RFSKHSLQNRDMMEGSWLDNIIWEPVD---AVGKPKLIL 555
N K V S+++ S A+K + K L N++ +W P D A+ + K IL
Sbjct: 511 NAKKSTVHSLRVFHSAPAIKLQTMKIKLSNKERANFH-RPKALWYPHDNELAIKQQK-IL 568
Query: 556 DLQDEQMLFEILDNKDDEHPLLHAGA--MIITRSAKPS---DFKPAESVKLFYLGKELED 610
Q + ++ + + LL G + + AK S DFK E+VK+FY+GKELED
Sbjct: 569 PTQGSMTI--VVKSLGGKGSLLTVGREESVSSLKAKASRKLDFKETEAVKMFYMGKELED 626
Query: 611 HKSLADQNVRPNSLIHLIRTKIHLLPRAQKLPGENKSLRPPGAFKKKSDLSVKDGHVFLM 670
KSLA+QNV+PNSL+HL+RTK+HL P AQKLPGENKSLRPPGAFKKKSDLS +DGHVFLM
Sbjct: 627 EKSLAEQNVQPNSLVHLLRTKVHLWPWAQKLPGENKSLRPPGAFKKKSDLSNQDGHVFLM 686
Query: 671 EYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLTLEPGDKSPFLGD 730
EYCEERPL+LSNAGMGANLCTYYQKSSP DQ G LL + ++ LG+V+ LE G+KSPFLG+
Sbjct: 687 EYCEERPLMLSNAGMGANLCTYYQKSSPEDQHGNLLRNQSDTLGSVIILEHGNKSPFLGE 746
Query: 731 IKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRRIDKVAVVAQQEPLMEVM 790
+ GCSQSS+ETNMY+APVF H++ +TD+LLVRSAKGK+S+RRI+K+ V QQEP ME+M
Sbjct: 747 VHGGCSQSSVETNMYKAPVFPHRLQSTDYLLVRSAKGKLSLRRINKIVAVGQQEPRMEIM 806
Query: 791 SPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLSEAIIRKKLKECA 850
SP SKNL Y +NRM+ VYREF + I DELS F N+S+A +RK ++ C+
Sbjct: 807 SPASKNLHAYLVNRMMAYVYREFKHRDR------IAADELSFSFSNISDATVRKYMQVCS 860
Query: 851 FLRRDGNGKQVWSMKRTFH-IPSEGDLRKLAYPEHVCSYESMQAGLYRLKHLGITQLTLP 909
L RD NGK WS KR F IP G L L PE VCSYESM AGL+RLKHLGIT+ TLP
Sbjct: 861 DLERDANGKACWSKKRKFDKIPL-G-LNTLVAPEDVCSYESMLAGLFRLKHLGITRFTLP 918
Query: 910 ASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENIERLEITGVGDP 969
ASIS+A++QLPDE IA AASHI RELQITPWNLSS+FV C Q RENIERLEITGVGDP
Sbjct: 919 ASISTALAQLPDERIA--AASHIARELQITPWNLSSSFVTCATQGRENIERLEITGVGDP 976
Query: 970 SGRGLGFSYVRXXXXXXXXXXXXXXXXXXNRGGSTVTGTDADLRRLSMEAAREVLLKFNV 1029
SGRGLGFSYVR RG TVTGTDAD RRLSMEAAREVLLKFNV
Sbjct: 977 SGRGLGFSYVRVAPKSSAASEHKKKKAAACRGVPTVTGTDADPRRLSMEAAREVLLKFNV 1036
Query: 1030 PEEMIAKQTRWHRIAMIRKLSSEQAASG-------------------VQLQQQTRGKCQE 1070
P+E+IAKQT+ HR AMIRK+SSEQAASG +QLQQQ R C E
Sbjct: 1037 PDEIIAKQTQRHRTAMIRKISSEQAASGGKVGPTTVGMFSRSQRMSFLQLQQQAREMCHE 1096
Query: 1071 IWDRQVQSLSAADDDEIGSDSE-HSDLDSFAGDXXXXXXXXXXXXXXSNYDTKHDKVEGV 1129
IWDRQ SLSA DDD S++E +SDLDSF GD + + ++K++GV
Sbjct: 1097 IWDRQRLSLSACDDDGNESENEANSDLDSFVGDLEDLLDAEDGGEGEESNKSMNEKLDGV 1156
Query: 1130 KGLKMRRRPIQVQXXXXXXXXXXXXXXLCRLLMDDDEAELXXXXXXXXAQVEGGLSLAKS 1189
KGLKMRR P QV+ LCRLLM D+ + EG S
Sbjct: 1157 KGLKMRRWPSQVEKDEEIEDEAAEYVELCRLLMQDENDKKKKKLKDVG---EGIGSFPPP 1213
Query: 1190 ISGLE-IVERLKKANKPAKHIAITVQPNGSHTANEQ---IKDPKEEESLIAKRNLSGKVQ 1245
S E +++ A +P I + HT N K PK+++ + + +
Sbjct: 1214 RSNFEPFIDKKYIATEPDASFLIVNESTVKHTKNVDKATSKSPKDKQV----KEIGTPIC 1269
Query: 1246 AMKKNNVQGEKIIKG 1260
MKK + +K+ G
Sbjct: 1270 QMKKILKENQKVFMG 1284
Score = 641 (230.7 bits), Expect = 2.9e-251, Sum P(2) = 2.9e-251
Identities = 176/487 (36%), Positives = 253/487 (51%)
Query: 114 VDYEDIDEQYEGPEIQIASEEDYLLPKKEYFAAEVSLAALKPTASPFXXXXXXXXXXXXX 173
VDY DE+Y+GPE+Q+ +EED+LLPK+EY +A +L+ L AS F
Sbjct: 5 VDYGSNDEEYDGPELQVVTEEDHLLPKREYLSAAFALSGLNSRASVFDDEDYDEQGGQEK 64
Query: 174 XXXXXXXXXXXXXXILSGEQVECATAVPDGEKSPEGDPQVGSLGAEEEMTAGVKDYDEEL 233
E+ E V EK + + + LG + +M G D EEL
Sbjct: 65 EHVPVEKS-------FDSEERE--PVVLKEEKPVKHEKEASILGNKNQMDTG--DVQEEL 113
Query: 234 A-DILKGPLDGQVSTPLPVLCVED-GKVILRFSEIFGIHEPLKKGKKRDQRYSTPKDKYN 291
+ + LD + TPLP L +ED G VIL+FSEIF I EP KK +KR+ R T +DKY
Sbjct: 114 VVGLSEATLDEKRVTPLPTLYLEDDGMVILQFSEIFAIQEPQKKRQKREIRCITYRDKYI 173
Query: 292 TMXXXXXXXXXXXXYLKGSGQGFPLFKEANIFQHGIFSLNDDDSELVKFGVEQDAATIS- 350
+M LK G+ K+ + Q + + S+LVK G+ +D + S
Sbjct: 174 SMDISELIEDDEEVLLKSHGRIDTHGKKTDQIQLDVPLPIRERSQLVKSGIVRDTTSESR 233
Query: 351 EHDEQRKDSCICSEPMKEESNVNPSVGWKSMPSPNFFPLDQHDWEENIVWDNSPAASDNS 410
E + +DSCI E +K++ + S +S + FPLDQ +WE I+W+ SP S N
Sbjct: 234 EFTKLGRDSCIMGELLKQDLKDDNSSLCQSQLTMEVFPLDQQEWEHLILWEISPQFSANC 293
Query: 411 IESH----EIAGADVESALMRGIELDTGQNNFHERS-TSPNEKDCIVNMQNSPVLSETFG 465
E E AG V+ + N + T + + + +P+ E+FG
Sbjct: 294 CEGFKSGLESAGIMVQVRASNSVTEQESLNVMNSGGQTQGDNNNMLEPFFVNPL--ESFG 351
Query: 466 SKSSSDNTSHLFTESRYHPQLLRLESQLDLDNHSHANGIKENVSIKLCQSDAVKRFSKHS 525
S+ S +T+ +SR+HPQLLRLESQ D D H NG ++K SDA R S +
Sbjct: 352 SRGSQ-STNESTNKSRHHPQLLRLESQWDED-HYRENGDAGRENLKQLNSDARGRLSGLA 409
Query: 526 LQNRDMMEGSWLDNIIWEPVDAVGKPKLILDLQDEQMLFEILDNKDDEHPLLHAGAMIIT 585
LQ+RDM + SWLD+IIWE + + KLI DLQDEQM+FE+ +NK+ ++ LHAG+ I++
Sbjct: 410 LQDRDMWDESWLDSIIWESDKDLSRSKLIFDLQDEQMIFEVPNNKERKYLQLHAGSRIVS 469
Query: 586 RSAKPSD 592
RS+K D
Sbjct: 470 RSSKSKD 476
Score = 47 (21.6 bits), Expect = 1.9e-188, Sum P(2) = 1.9e-188
Identities = 13/62 (20%), Positives = 31/62 (50%)
Query: 83 LFCSYCLLSVNSPQPPVDAVEQDYDKKAEDAVDYEDIDEQYEGPEIQ--IASEEDYLLPK 140
L ++ L +NS D ++DYD++ ++ +++ ++ E + + EE + +
Sbjct: 35 LSAAFALSGLNSRASVFD--DEDYDEQGGQEKEHVPVEKSFDSEEREPVVLKEEKPVKHE 92
Query: 141 KE 142
KE
Sbjct: 93 KE 94
Score = 47 (21.6 bits), Expect = 4.9e-58, Sum P(2) = 4.9e-58
Identities = 12/41 (29%), Positives = 20/41 (48%)
Query: 842 IRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYP 882
IR K++ + R VW +K H+ ++G R L+ P
Sbjct: 1712 IRDKVRRMEYRDRQQFRHDVWQIKFNAHLYNDG--RNLSIP 1750
>DICTYBASE|DDB_G0292242 [details] [associations]
symbol:taf1 "transcription initiation factor TFIID
subunit 1" species:44689 "Dictyostelium discoideum" [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0016573 "histone acetylation"
evidence=ISS] [GO:0005669 "transcription factor TFIID complex"
evidence=ISS] [GO:0004402 "histone acetyltransferase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001487 Pfam:PF00439 PROSITE:PS50014 SMART:SM00297
dictyBase:DDB_G0292242 GenomeReviews:CM000155_GR GO:GO:0045944
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 eggNOG:COG5076
InterPro:IPR018359 GO:GO:0004402 EMBL:AAFI02000188 GO:GO:0005669
HSSP:Q92830 KO:K03125 InterPro:IPR022591 Pfam:PF12157
RefSeq:XP_629749.1 ProteinModelPortal:Q54DH8 STRING:Q54DH8
PRIDE:Q54DH8 EnsemblProtists:DDB0220687 GeneID:8628578
KEGG:ddi:DDB_G0292242 InParanoid:Q54DH8 OMA:EHRSSEH Uniprot:Q54DH8
Length = 2310
Score = 651 (234.2 bits), Expect = 4.3e-69, Sum P(5) = 4.3e-69
Identities = 171/505 (33%), Positives = 255/505 (50%)
Query: 657 KSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNV 716
KSDLS +DG + L+EY E+ P L+SN GMG + YY+K + D L N G +
Sbjct: 966 KSDLSARDGRLVLIEYTEQHPPLVSNVGMGLRIRNYYKKKNTHDTGPKDL---NFEDGEL 1022
Query: 717 LTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKI-SIRRID 775
+ L+ ++SPFLGDI G + S+ N+++ P+ H A TDFLLV+S GK IR +
Sbjct: 1023 VMLDNNEESPFLGDINPGQTIQSVVNNLFKVPIHKHNSANTDFLLVKSRDGKRWYIRDVG 1082
Query: 776 KVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFP 835
+ Q P +EV +P S+N + +R+ +YR+F K + + ++ FP
Sbjct: 1083 PIYAAGQILPEVEVPAPNSRNANMFLKSRLQAYIYRQF--LKKSNPQRRLKITDICSAFP 1140
Query: 836 NLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGL 895
+ SE IRK+LK+CA +R G+ W++K F +P+E + +KL PE V S+ESM GL
Sbjct: 1141 SQSETSIRKRLKDCADFQRGGDDSGWWTVKDNFTLPTEEEFQKLVTPEAVVSFESMLIGL 1200
Query: 896 YRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDR 955
RL+ GI T P +I + + L DE + +E EL ITPWNL+ +F++ Q +
Sbjct: 1201 QRLQDNGIIHFTAPGTIPTILGNLDDEDPIKKSIKPVEDELSITPWNLTGSFLSAM-QGK 1259
Query: 956 ENIERLEITGVGDPSGRGLGFSYVRXXXXXXXXXXXXXXXXXXNRGGSTVTGTDADLRRL 1015
RL+I DP+GR +SY++ + VTGTDADLR+L
Sbjct: 1260 G---RLQIIS-DDPTGREDEYSYLKMPQKVVNQKQKAIKLALQK---NQVTGTDADLRKL 1312
Query: 1016 SMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAA---SGVQLQQQTRG------ 1066
S+ A++ VLL+ V EE I K RW RI ++RK SSE A S + + RG
Sbjct: 1313 SLSASKTVLLELGVDEETINKLARWQRIDLVRKKSSEAALASNSNAAMTKFARGSRYSLD 1372
Query: 1067 --------KCQEIWDRQVQSLSAADDDEIGSDSEHS---DL-DSFAGDXXXXXXXXXXXX 1114
+CQ ++D Q+++++ DD D + DL DS GD
Sbjct: 1373 HQNLQYKEQCQLVFDNQIKAIAGKGDDLYDEDLDADLLKDLEDSLFGDSNQSQNQNQNQN 1432
Query: 1115 XXSNYDTKHDKVEGVKGLKMRRRPI 1139
N ++ K R R +
Sbjct: 1433 QNQNQSNNNNNKSSSKSTGKRSRSL 1457
Score = 123 (48.4 bits), Expect = 4.3e-69, Sum P(5) = 4.3e-69
Identities = 38/162 (23%), Positives = 74/162 (45%)
Query: 408 DNSIESHEIAGADVESALMRGIELDTGQNNFHERSTSPNEKDCIVNMQNSPVLSETFGSK 467
D+ E EI D ++ L + + + + ++ + NE+ I + N+ S T +
Sbjct: 592 DHISEKEEIMDTDSQNLLQQPLSQEKDKEKEKDKDKAQNEQH-IQTIVNNKKNSTTNNNN 650
Query: 468 SSSDNTSHLFTESRYHPQLLRLESQLDLDNHSHANGIKENVSIKLCQSDAVKRFSKHSLQ 527
+++N ++ T + + + + +N++ N KE I + ++S +
Sbjct: 651 LTNNNGNNNNTNNNNNNSNNNSNNNNNNNNNNKQNNNKE---IDEIMKSNIDKWSLFPIS 707
Query: 528 NRDMMEGSWLDNIIWE----PVDAVGKPKLILDLQDEQMLFE 565
N+++ G W+DNIIW+ P LILDL D +M FE
Sbjct: 708 NQELENGDWIDNIIWDESMVPEKIQQVSMLILDLNDREMYFE 749
Score = 81 (33.6 bits), Expect = 1.0e-64, Sum P(5) = 1.0e-64
Identities = 43/215 (20%), Positives = 86/215 (40%)
Query: 364 EPMKEESNVNPSVGWKSMPSPNFFPLDQHDWEENIVWDNSPAA----SDNSIESHEIAGA 419
EP++E + + +P N+ L Q +WE+NI+WD SD+ + + +
Sbjct: 440 EPLRETEDEEIMTMFYMVPDSNYHSLQQVNWEDNIIWDEESLIKFKKSDHFNQFYLSSDN 499
Query: 420 DVESALMR-GIELDTGQNNFHERSTSPNEKDCIVNMQNSPVLSETFGSKSSSDNTSHLFT 478
++ +++ I + N+ +PN +S + T + S++ T+ T
Sbjct: 500 QQQNIIIKEAITMPVEINDL-----TPNLNKNSKQTSSSSTTTSTTTTTSTTTTTTTTTT 554
Query: 479 ESRYHPQLLRLESQLDLDNHSHANGIKENVSIKLCQSDAVKRFSKHSLQNRDMMEGSWLD 538
+ +Q + N + N N S KL D + K + + D
Sbjct: 555 ATTLSSTSTSTTTQRNNKNKNKNNNNNINNSSKLFGLDHISE--KEEIMDTDSQ------ 606
Query: 539 NIIWEPVDAVGKPKLILD---LQDEQMLFEILDNK 570
N++ +P+ + D Q+EQ + I++NK
Sbjct: 607 NLLQQPLSQEKDKEKEKDKDKAQNEQHIQTIVNNK 641
Score = 74 (31.1 bits), Expect = 4.3e-69, Sum P(5) = 4.3e-69
Identities = 32/97 (32%), Positives = 47/97 (48%)
Query: 28 GNRLLGFMFGNVDYAGDLDVDYLDEDAKEHLAAVADKLGPSLTDIDVWNSQSCFQLFCSY 87
GN L GF+FGNV +G+LDV+ D+ K+ K D++++ S F
Sbjct: 9 GN-LTGFLFGNVKESGELDVEENDQVFKD-----LKK------DLELFAKSSQHISFKKT 56
Query: 88 CLLSVNSPQPPVDAVEQDYDKKAEDAVDYEDIDEQYE 124
+ + D+V DK +A+DYEDIDE E
Sbjct: 57 IGIDEDDKNAVTDSVIVP-DK---NALDYEDIDEVAE 89
Score = 62 (26.9 bits), Expect = 9.2e-63, Sum P(5) = 9.2e-63
Identities = 18/54 (33%), Positives = 28/54 (51%)
Query: 350 SEHDEQRKDSCICSEPMKEESNVNPSVGWKSMPSPNFFPLDQHDWEENIVWDNS 403
+ +++Q + I E MK SN++ W P N L+ DW +NI+WD S
Sbjct: 679 NNNNKQNNNKEI-DEIMK--SNIDK---WSLFPISNQ-ELENGDWIDNIIWDES 725
Score = 53 (23.7 bits), Expect = 4.3e-69, Sum P(5) = 4.3e-69
Identities = 13/30 (43%), Positives = 19/30 (63%)
Query: 260 ILRFSEIFGIHEPLK--KGKKRDQRYSTPK 287
IL+FS++F P K + K R R+STP+
Sbjct: 320 ILKFSQLFAPKFPDKPTRKKSRKTRFSTPQ 349
Score = 45 (20.9 bits), Expect = 0.00018, Sum P(5) = 0.00018
Identities = 20/78 (25%), Positives = 30/78 (38%)
Query: 676 RPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLTLEPGDKSPFLGDIKAGC 735
RP +L + + + Y ++ G +G L S NN L N T G I G
Sbjct: 892 RPRILFPSNVPFRIIIYNKE---GSLSGDLSSSSNNLLLNSSTNSIMGGHNMRGSINGGM 948
Query: 736 SQSSLETNMYRAPVFTHK 753
SS ++ + HK
Sbjct: 949 MSSSSSSSSSSSKKSLHK 966
Score = 44 (20.5 bits), Expect = 5.5e-60, Sum P(4) = 5.5e-60
Identities = 25/123 (20%), Positives = 48/123 (39%)
Query: 354 EQRKDSCICSEPMKEESNVNPS--VGWKSMPSPNFFPLDQHDWEENIVWDNSPAASDNSI 411
EQ++ E K+ V + K PS + F D+ + ++ S + D
Sbjct: 131 EQQQRQLSKKERRKQRKQVGSKQPLQIKKKPSVDDFDFDEEEEQQQ---QKSTRSEDE-- 185
Query: 412 ESHEIAGADVESALMRGIELDTGQNNFHERSTSPNEKDCIVNMQNSPVLSETFGSKSSSD 471
+ +I+ A S+ + ++ RS S E D + + S + S+SS
Sbjct: 186 DDDDISSASSLSSSSASSSASSSRSPSMSRSASDIESDSMSDSSRSS--GSSISSRSSIS 243
Query: 472 NTS 474
++S
Sbjct: 244 SSS 246
Score = 38 (18.4 bits), Expect = 4.3e-69, Sum P(5) = 4.3e-69
Identities = 6/26 (23%), Positives = 18/26 (69%)
Query: 1226 KDPKEEESLIAKRNLSGKVQAMKKNN 1251
++ ++EE+ +R + +++ +KKN+
Sbjct: 1575 QNEEDEETKKQRRRIQERLRRLKKND 1600
Score = 38 (18.4 bits), Expect = 4.3e-69, Sum P(5) = 4.3e-69
Identities = 7/43 (16%), Positives = 19/43 (44%)
Query: 1211 ITVQPNGSHTANEQIKDPKEEESLIAKRNLSGKVQAMKKNNVQ 1253
++ +GS+ + E ++ L G ++ ++N V+
Sbjct: 2065 LSASSSGSNRKKRTLDQSNSESPSLSSTTLDGSDKSSRRNRVR 2107
>MGI|MGI:1336878 [details] [associations]
symbol:Taf1 "TAF1 RNA polymerase II, TATA box binding
protein (TBP)-associated factor" species:10090 "Mus musculus"
[GO:0000080 "G1 phase of mitotic cell cycle" evidence=ISO]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0002039 "p53
binding" evidence=ISO] [GO:0003677 "DNA binding" evidence=IDA]
[GO:0003713 "transcription coactivator activity" evidence=ISO]
[GO:0004402 "histone acetyltransferase activity" evidence=ISO;IDA]
[GO:0004674 "protein serine/threonine kinase activity"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005669 "transcription factor TFIID complex"
evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006352 "DNA-dependent transcription, initiation"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=ISO]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0016310
"phosphorylation" evidence=IEA] [GO:0016573 "histone acetylation"
evidence=ISO;IDA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0017025 "TBP-class protein binding" evidence=ISO] [GO:0018105
"peptidyl-serine phosphorylation" evidence=ISO] [GO:0018107
"peptidyl-threonine phosphorylation" evidence=ISO] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045120 "pronucleus"
evidence=IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0046777 "protein
autophosphorylation" evidence=ISO] [GO:0070577 "histone
acetyl-lysine binding" evidence=ISO] [GO:0071339 "MLL1 complex"
evidence=ISO] InterPro:IPR001487 InterPro:IPR011177 Pfam:PF00439
PIRSF:PIRSF003047 PRINTS:PR00503 PROSITE:PS50011 PROSITE:PS50014
SMART:SM00297 MGI:MGI:1336878 GO:GO:0005524 GO:GO:0006355
GO:GO:0003677 GO:GO:0004674 GO:GO:0006352 PROSITE:PS50118
GO:GO:0007049 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
eggNOG:COG5076 GO:GO:0071339 InterPro:IPR018359 GO:GO:0045120
GO:GO:0004402 GO:GO:0005669 EMBL:AL806534 InterPro:IPR022591
Pfam:PF12157 Gene3D:1.10.1100.10 InterPro:IPR009067 Pfam:PF09247
SUPFAM:SSF47055 HOVERGEN:HBG050223 GeneTree:ENSGT00390000012659
HSSP:P21675 EMBL:AL831722 EMBL:BC047418 EMBL:BC094568 EMBL:AK045586
EMBL:AK046668 EMBL:AK049826 EMBL:AK050691 EMBL:AK132088
EMBL:AK143571 EMBL:AF081115 EMBL:AF081116 EMBL:AF081117
EMBL:AF022178 IPI:IPI00330385 IPI:IPI00671543 IPI:IPI00831185
UniGene:Mm.261750 ProteinModelPortal:Q80UV9 SMR:Q80UV9
STRING:Q80UV9 PhosphoSite:Q80UV9 PRIDE:Q80UV9
Ensembl:ENSMUST00000118878 Ensembl:ENSMUST00000149274
UCSC:uc009txx.1 UCSC:uc009txy.1 Bgee:Q80UV9 Genevestigator:Q80UV9
Uniprot:Q80UV9
Length = 1891
Score = 445 (161.7 bits), Expect = 1.6e-68, Sum P(5) = 1.6e-68
Identities = 121/362 (33%), Positives = 181/362 (50%)
Query: 621 PNSLIHLIRTKIHLLPRAQKLPGENKSLRPPGAF--KKKSDLSVKDGHVFLMEYCEERPL 678
P+S+ L++ H+ +A+ E ++ F + DL+ KDG + L EY EE
Sbjct: 654 PHSVQPLLK---HIKKKAKMREQERQASGGGEMFFMRTPQDLTGKDGDLILAEYSEENGP 710
Query: 679 LLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLTLEPGDKSPFLGDIKAGCSQS 738
L+ GM + YY K PG GA C G + SPFLG + G
Sbjct: 711 LMMQVGMATKIKNYY-KRKPGKDPGAPDCK----YGETVYCHT---SPFLGSLHPGQLLQ 762
Query: 739 SLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRRIDKVAVVAQQEPLMEVMSPGSKNLQ 798
+ E N++RAP++ HK+ +DFL++R+ +G IR + + VV QQ PL EV P SK
Sbjct: 763 AFENNLFRAPIYLHKMPESDFLIIRTRQGYF-IRELVDIFVVGQQCPLFEVPGPNSKRAN 821
Query: 799 TYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLSEAIIRKKLKECAFLRRDGNG 858
T+ + + V +YR F + R I ++++ FP+ SE+ IRK+LK CA +R G
Sbjct: 822 THIRDFLQVFIYRLFWKSKDRPRR--IRMEDIKKAFPSHSESSIRKRLKLCADFKRTGMD 879
Query: 859 KQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRLKHLGITQLTLPASISSAMSQ 918
W +K F +P+E ++R + PE C+Y SM A RLK G + + A
Sbjct: 880 SNWWVLKSDFRLPTEEEIRAMVSPEQCCAYYSMIAAEQRLKDAGYGEKSFFA-------- 931
Query: 919 LPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSY 978
P+E I+ E++ PWN + F+A LE+TGV DP+G G GFSY
Sbjct: 932 -PEEENEEDFQMKIDDEVRTAPWNTTRAFIAAMKGKC----LLEVTGVADPTGCGEGFSY 986
Query: 979 VR 980
V+
Sbjct: 987 VK 988
Score = 235 (87.8 bits), Expect = 1.6e-68, Sum P(5) = 1.6e-68
Identities = 65/183 (35%), Positives = 95/183 (51%)
Query: 932 IERELQITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRXXXXXXXXXXX 991
I+ E++ PWN + F+A LE+TGV DP+G G GFSYV+
Sbjct: 944 IDDEVRTAPWNTTRAFIAAMKGKC----LLEVTGVADPTGCGEGFSYVKIPNKPTQQKDD 999
Query: 992 XXXXXXXNRGGSTVTGTDADLRRLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSS 1051
TVTGTDADLRRLS++ A+++L KF VPEE I K +RW I ++R +S+
Sbjct: 1000 KEPQPVKK----TVTGTDADLRRLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMST 1055
Query: 1052 EQAASG---------------VQLQQQTRGKCQEIWDRQVQSLSAADDDEIGSDSEHSDL 1096
EQA SG + Q++ + +CQ I+D Q + LS+ + +DS ++
Sbjct: 1056 EQARSGEGPMSKFARGSRFSVAEHQERYKEECQRIFDLQNKVLSSTEVLSTDTDSSSAED 1115
Query: 1097 DSF 1099
F
Sbjct: 1116 SDF 1118
Score = 103 (41.3 bits), Expect = 1.6e-68, Sum P(5) = 1.6e-68
Identities = 39/123 (31%), Positives = 58/123 (47%)
Query: 5 DSGSASKXXXXXXXXXXXXXVSGGN-RLLGFMFGNVDYAGDLDVD-YLDEDAKEHLAAV- 61
D G S GG L GF+FGN++ AG L+ + LD++ K+HLA +
Sbjct: 11 DKGGGSPSVVMSDTDSDEESAGGGPFSLTGFLFGNINGAGQLEGESVLDDECKKHLAGLG 70
Query: 62 ADKLGPSLTDIDVWNSQSCFQLFCSYCLLSVNSPQPPVDAVEQDYDKKAEDAVDYEDIDE 121
A LG +T++ N + LS S V+ ++ + + EDAVDY DI+E
Sbjct: 71 ALGLGSLITELTA-NEE-----------LS-GSDGALVN--DEGWIRSREDAVDYSDINE 115
Query: 122 QYE 124
E
Sbjct: 116 VAE 118
Score = 96 (38.9 bits), Expect = 1.6e-68, Sum P(5) = 1.6e-68
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 521 FSKHSLQNRDMMEGSWLDNIIWEPVDA---VGKPKLILDLQDEQMLFEILDNKDD 572
+S + N D++ G W DNIIW+ + + P L LD DE ++ EI D K++
Sbjct: 486 YSIFPIDNEDLVYGRWEDNIIWDAQNMPRILEPPVLTLDPNDENLILEIPDEKEE 540
Score = 66 (28.3 bits), Expect = 1.6e-68, Sum P(5) = 1.6e-68
Identities = 17/64 (26%), Positives = 30/64 (46%)
Query: 341 GVEQDAATISEHDEQRK---DSCICSEPMKEESNVNPSVGWKSMPSPNFFPLDQHDWEEN 397
GV +D + + +K +S I MK+ + + G + NF + Q WE++
Sbjct: 375 GVPEDGSGFDYGFKMKKTEHESTIKCNIMKKLRKLEENSGVDLLADENFLMVTQLHWEDD 434
Query: 398 IVWD 401
I+WD
Sbjct: 435 IIWD 438
Score = 61 (26.5 bits), Expect = 7.2e-63, Sum P(4) = 7.2e-63
Identities = 13/30 (43%), Positives = 17/30 (56%)
Query: 382 PSPNFFPLDQHD-----WEENIVWD--NSP 404
P + FP+D D WE+NI+WD N P
Sbjct: 484 PWYSIFPIDNEDLVYGRWEDNIIWDAQNMP 513
Score = 50 (22.7 bits), Expect = 3.0e-07, Sum P(4) = 3.0e-07
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 1220 TANEQIKDPKEEESLIAKRNLSGKVQAMKKNNVQ 1253
T+N K+ K+E SL R L GK +K+ Q
Sbjct: 542 TSNSPSKENKKESSLKKSRILLGKTGVIKEEPQQ 575
Score = 42 (19.8 bits), Expect = 6.8e-61, Sum P(4) = 6.8e-61
Identities = 15/52 (28%), Positives = 25/52 (48%)
Query: 500 HANGIKENVSIKLCQSDAVKRFSKHSLQNRDMM-EGSWLDNIIWEPVDAVGK 550
H + IK N+ KL + + + +N M+ + W D+IIW+ D K
Sbjct: 394 HESTIKCNIMKKLRKLEENSGVDLLADENFLMVTQLHWEDDIIWDGEDVKHK 445
Score = 37 (18.1 bits), Expect = 1.9e-18, Sum P(3) = 1.9e-18
Identities = 15/49 (30%), Positives = 24/49 (48%)
Query: 822 LPCIGV--DELSVQFPNLSEAIIR-KKLKECAFLRRDGNGKQVWSMKRT 867
LP G+ + + P+++E + K FLR G GK V S+ R+
Sbjct: 230 LPLAGIMQHDATKLLPSVTELFPEFRPGKVLRFLRLFGPGKNVPSVWRS 278
>RGD|1562050 [details] [associations]
symbol:Taf1 "TAF1 RNA polymerase II, TATA box binding protein
(TBP)-associated factor" species:10116 "Rattus norvegicus"
[GO:0000080 "G1 phase of mitotic cell cycle" evidence=ISO]
[GO:0002039 "p53 binding" evidence=ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0003677 "DNA binding"
evidence=IEA;ISO] [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0004402 "histone acetyltransferase activity"
evidence=ISO] [GO:0004674 "protein serine/threonine kinase
activity" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005669 "transcription factor TFIID complex" evidence=IEA;ISO]
[GO:0006352 "DNA-dependent transcription, initiation" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0016573 "histone acetylation" evidence=ISO]
[GO:0017025 "TBP-class protein binding" evidence=ISO] [GO:0018105
"peptidyl-serine phosphorylation" evidence=ISO] [GO:0018107
"peptidyl-threonine phosphorylation" evidence=ISO] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0042493 "response to drug"
evidence=IEP] [GO:0045120 "pronucleus" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0046777 "protein autophosphorylation"
evidence=ISO] [GO:0070577 "histone acetyl-lysine binding"
evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR001487 InterPro:IPR011177
Pfam:PF00439 PIRSF:PIRSF003047 PRINTS:PR00503 PROSITE:PS50014
SMART:SM00297 RGD:1562050 GO:GO:0005634 GO:GO:0006355 GO:GO:0042493
GO:GO:0003677 GO:GO:0006352 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0045120 GO:GO:0005669
InterPro:IPR022591 Pfam:PF12157 Gene3D:1.10.1100.10
InterPro:IPR009067 Pfam:PF09247 SUPFAM:SSF47055 OrthoDB:EOG4K3KVC
IPI:IPI00951101 Ensembl:ENSRNOT00000066825 UCSC:RGD:1562050
ArrayExpress:D3ZM43 Uniprot:D3ZM43
Length = 1902
Score = 444 (161.4 bits), Expect = 4.7e-68, Sum P(5) = 4.7e-68
Identities = 121/362 (33%), Positives = 181/362 (50%)
Query: 621 PNSLIHLIRTKIHLLPRAQKLPGENKSLRPPGAF--KKKSDLSVKDGHVFLMEYCEERPL 678
P+S+ L++ H+ +A+ E ++ F + DL+ KDG + L EY EE
Sbjct: 660 PHSVQPLLK---HIKKKAKMREQERQASGGGEMFFMRTPQDLTGKDGDLILAEYSEENGP 716
Query: 679 LLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLTLEPGDKSPFLGDIKAGCSQS 738
L+ GM + YY K PG GA C G + SPFLG + G
Sbjct: 717 LMMQVGMATKIKNYY-KRKPGKDPGAPDCK----YGETVYCHT---SPFLGSLHPGQLLQ 768
Query: 739 SLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRRIDKVAVVAQQEPLMEVMSPGSKNLQ 798
+ E N++RAP++ HK+ +DFL++R+ +G IR + + VV QQ PL EV P SK
Sbjct: 769 AFENNLFRAPIYLHKMPESDFLIIRTRQGYY-IRELVDIFVVGQQCPLFEVPGPNSKRAN 827
Query: 799 TYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLSEAIIRKKLKECAFLRRDGNG 858
T+ + + V +YR F + R I ++++ FP+ SE+ IRK+LK CA +R G
Sbjct: 828 THIRDFLQVFIYRLFWKSKDRPRR--IRMEDIKKAFPSHSESSIRKRLKLCADFKRTGMD 885
Query: 859 KQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRLKHLGITQLTLPASISSAMSQ 918
W +K F +P+E ++R + PE C+Y SM A RLK G + + A
Sbjct: 886 SNWWVLKSDFRLPTEEEIRAMVSPEQCCAYYSMIAAEQRLKDAGYGEKSFFA-------- 937
Query: 919 LPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSY 978
P+E I+ E++ PWN + F+A LE+TGV DP+G G GFSY
Sbjct: 938 -PEEENEEDFQMKIDDEVRTAPWNTTRAFIAAMKGKC----LLEVTGVADPTGCGEGFSY 992
Query: 979 VR 980
V+
Sbjct: 993 VK 994
Score = 235 (87.8 bits), Expect = 4.7e-68, Sum P(5) = 4.7e-68
Identities = 65/183 (35%), Positives = 95/183 (51%)
Query: 932 IERELQITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRXXXXXXXXXXX 991
I+ E++ PWN + F+A LE+TGV DP+G G GFSYV+
Sbjct: 950 IDDEVRTAPWNTTRAFIAAMKGKC----LLEVTGVADPTGCGEGFSYVKIPNKPTQQKDD 1005
Query: 992 XXXXXXXNRGGSTVTGTDADLRRLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSS 1051
TVTGTDADLRRLS++ A+++L KF VPEE I K +RW I ++R +S+
Sbjct: 1006 KEPQPVKK----TVTGTDADLRRLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMST 1061
Query: 1052 EQAASG---------------VQLQQQTRGKCQEIWDRQVQSLSAADDDEIGSDSEHSDL 1096
EQA SG + Q++ + +CQ I+D Q + LS+ + +DS ++
Sbjct: 1062 EQARSGEGPMSKFARGSRFSVAEHQERYKEECQRIFDLQNKVLSSTEVLSTDTDSSSAED 1121
Query: 1097 DSF 1099
F
Sbjct: 1122 SDF 1124
Score = 101 (40.6 bits), Expect = 4.7e-68, Sum P(5) = 4.7e-68
Identities = 38/123 (30%), Positives = 59/123 (47%)
Query: 5 DSGSASKXXXXXXXXXXXXXVSGGN-RLLGFMFGNVDYAGDLDVD-YLDEDAKEHLAAV- 61
+ GS S GG L GF+FGN++ AG L+ + LD++ K+HLA +
Sbjct: 11 EDGSGSPSAVMSDTDSDEDSAGGGPFSLTGFLFGNINGAGQLEGESVLDDECKKHLAGLG 70
Query: 62 ADKLGPSLTDIDVWNSQSCFQLFCSYCLLSVNSPQPPVDAVEQDYDKKAEDAVDYEDIDE 121
A LG +T++ N + LS + V+ ++ + + EDAVDY DI+E
Sbjct: 71 ALGLGSLITELTA-NEE-----------LS-GTDGTLVN--DEGWIRSREDAVDYSDINE 115
Query: 122 QYE 124
E
Sbjct: 116 VAE 118
Score = 96 (38.9 bits), Expect = 4.7e-68, Sum P(5) = 4.7e-68
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 521 FSKHSLQNRDMMEGSWLDNIIWEPVDA---VGKPKLILDLQDEQMLFEILDNKDD 572
+S + N D++ G W DNIIW+ + + P L LD DE ++ EI D K++
Sbjct: 492 YSIFPIDNEDLVYGRWEDNIIWDAQNMPRILEPPVLTLDPNDENLILEIPDEKEE 546
Score = 80 (33.2 bits), Expect = 1.6e-64, Sum P(4) = 1.6e-64
Identities = 21/72 (29%), Positives = 32/72 (44%)
Query: 340 FGVEQDAATISEHDEQRKDSCICSEPMKEESNVNPSVGWKSMPSPNFFPLDQHD-----W 394
+ V+Q+ I E +Q K + + + PS P + FP+D D W
Sbjct: 448 YNVQQERPYIKEPTKQEKKNTREQISLNHNTGAMPSTLDDDKPWYSIFPIDNEDLVYGRW 507
Query: 395 EENIVWD--NSP 404
E+NI+WD N P
Sbjct: 508 EDNIIWDAQNMP 519
Score = 65 (27.9 bits), Expect = 4.7e-68, Sum P(5) = 4.7e-68
Identities = 17/64 (26%), Positives = 30/64 (46%)
Query: 341 GVEQDAATISEHDEQRK---DSCICSEPMKEESNVNPSVGWKSMPSPNFFPLDQHDWEEN 397
GV +D + + +K DS + MK+ + + G + NF + Q WE++
Sbjct: 354 GVPEDGSGFDYGFKMKKTEHDSTMKYNIMKKLRKLEENNGVDLLADENFLMVTQLHWEDD 413
Query: 398 IVWD 401
I+WD
Sbjct: 414 IIWD 417
Score = 50 (22.7 bits), Expect = 6.1e-07, Sum P(4) = 6.1e-07
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 1220 TANEQIKDPKEEESLIAKRNLSGKVQAMKKNNVQ 1253
T+N K+ K+E SL R L GK +K+ Q
Sbjct: 548 TSNSPSKENKKESSLKKSRILLGKTGVIKEEPQQ 581
Score = 42 (19.8 bits), Expect = 9.4e-19, Sum P(3) = 9.4e-19
Identities = 21/75 (28%), Positives = 33/75 (44%)
Query: 822 LPCIGV--DELSVQFPNLSEAIIR-KKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRK 878
LP G+ + + P+++E + K FLR G GK V S+ R+ + R+
Sbjct: 209 LPLAGIMQHDATKLLPSVTELFPEFRPGKVLRFLRLFGPGKNVPSVWRSARRKRKKKHRE 268
Query: 879 LAYPEHV----CSYE 889
L E + CS E
Sbjct: 269 LIQEEQIQEEECSVE 283
Score = 40 (19.1 bits), Expect = 2.4e-60, Sum P(4) = 2.4e-60
Identities = 14/52 (26%), Positives = 25/52 (48%)
Query: 500 HANGIKENVSIKLCQSDAVKRFSKHSLQNRDMM-EGSWLDNIIWEPVDAVGK 550
H + +K N+ KL + + + +N M+ + W D+IIW+ D K
Sbjct: 373 HDSTMKYNIMKKLRKLEENNGVDLLADENFLMVTQLHWEDDIIWDGEDVKHK 424
>UNIPROTKB|Q60544 [details] [associations]
symbol:TAF1 "Transcription initiation factor TFIID subunit
1" species:10036 "Mesocricetus auratus" [GO:0000080 "G1 phase of
mitotic cell cycle" evidence=IMP] [GO:0004402 "histone
acetyltransferase activity" evidence=ISS] [GO:0004674 "protein
serine/threonine kinase activity" evidence=ISS] [GO:0016573
"histone acetylation" evidence=ISS] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0071339 "MLL1 complex" evidence=ISS]
InterPro:IPR001487 InterPro:IPR011177 Pfam:PF00439
PIRSF:PIRSF003047 PRINTS:PR00503 PROSITE:PS50011 PROSITE:PS50014
SMART:SM00297 GO:GO:0005524 GO:GO:0003677 GO:GO:0004674
GO:GO:0045944 GO:GO:0006352 PROSITE:PS50118 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 GO:GO:0071339 InterPro:IPR018359
GO:GO:0000080 GO:GO:0004402 GO:GO:0005669 InterPro:IPR022591
Pfam:PF12157 Gene3D:1.10.1100.10 InterPro:IPR009067 Pfam:PF09247
SUPFAM:SSF47055 HOVERGEN:HBG050223 EMBL:D26114 PIR:I48155
HSSP:P21675 ProteinModelPortal:Q60544 SMR:Q60544 PRIDE:Q60544
Uniprot:Q60544
Length = 1865
Score = 448 (162.8 bits), Expect = 6.0e-68, Sum P(5) = 6.0e-68
Identities = 122/362 (33%), Positives = 181/362 (50%)
Query: 621 PNSLIHLIRTKIHLLPRAQKLPGENKSLRPPGAF--KKKSDLSVKDGHVFLMEYCEERPL 678
P+S+ L++ H+ +A+ E ++ F + DL+ KDG + L EY EE
Sbjct: 628 PHSVQPLLK---HIKKKAKMREQERQASGGGEMFFMRTPQDLTGKDGDLILAEYSEENGP 684
Query: 679 LLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLTLEPGDKSPFLGDIKAGCSQS 738
L+ GM + YY K PG GA C G + SPFLG + G
Sbjct: 685 LMMQVGMATKIKNYY-KRKPGKDPGAPDCK----YGETVYCHT---SPFLGSLHPGQLLQ 736
Query: 739 SLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRRIDKVAVVAQQEPLMEVMSPGSKNLQ 798
+ E N++RAP++ HK+ TDFL++R+ +G IR + + VV QQ PL EV P SK
Sbjct: 737 AFENNLFRAPIYLHKMPETDFLIIRTRQGYY-IRELVDIFVVGQQCPLFEVPGPNSKRAN 795
Query: 799 TYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLSEAIIRKKLKECAFLRRDGNG 858
T+ + + V +YR F + R I ++++ FP+ SE+ IRK+LK CA +R G
Sbjct: 796 THIRDFLQVFIYRLFWKSKDRPRR--IRMEDIKKAFPSHSESSIRKRLKLCADFKRTGMD 853
Query: 859 KQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRLKHLGITQLTLPASISSAMSQ 918
W +K F +P+E ++R + PE C+Y SM A RLK G + + A
Sbjct: 854 SNWWVLKSDFRLPTEEEIRAMVSPEQCCAYYSMIAAEQRLKDAGYGEKSFFA-------- 905
Query: 919 LPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSY 978
P+E I+ E++ PWN + F+A LE+TGV DP+G G GFSY
Sbjct: 906 -PEEENEEDFQMKIDDEVRTAPWNTTRAFIAAMKGKC----LLEVTGVADPTGCGEGFSY 960
Query: 979 VR 980
V+
Sbjct: 961 VK 962
Score = 235 (87.8 bits), Expect = 6.0e-68, Sum P(5) = 6.0e-68
Identities = 65/183 (35%), Positives = 95/183 (51%)
Query: 932 IERELQITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRXXXXXXXXXXX 991
I+ E++ PWN + F+A LE+TGV DP+G G GFSYV+
Sbjct: 918 IDDEVRTAPWNTTRAFIAAMKGKC----LLEVTGVADPTGCGEGFSYVKIPNKPTQQKDD 973
Query: 992 XXXXXXXNRGGSTVTGTDADLRRLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSS 1051
TVTGTDADLRRLS++ A+++L KF VPEE I K +RW I ++R +S+
Sbjct: 974 KEPQPVKK----TVTGTDADLRRLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMST 1029
Query: 1052 EQAASG---------------VQLQQQTRGKCQEIWDRQVQSLSAADDDEIGSDSEHSDL 1096
EQA SG + Q++ + +CQ I+D Q + LS+ + +DS ++
Sbjct: 1030 EQARSGEGPMSKFARGSRFSVAEHQERYKEECQRIFDLQNKVLSSTEVLSTDTDSSSAED 1089
Query: 1097 DSF 1099
F
Sbjct: 1090 SDF 1092
Score = 98 (39.6 bits), Expect = 6.0e-68, Sum P(5) = 6.0e-68
Identities = 39/120 (32%), Positives = 59/120 (49%)
Query: 9 ASKXXXXXXXXXXXXXVSGGN--RLLGFMFGNVDYAGDLDVD-YLDEDAKEHLAAV-ADK 64
AS+ SGG L GF+FGN++ AG L+ + LD++ K+HLA + A
Sbjct: 8 ASRSAAIMSDTDSDEDSSGGGPFSLTGFLFGNINGAGQLEGESVLDDECKKHLAGLGALG 67
Query: 65 LGPSLTDIDVWNSQSCFQLFCSYCLLSVNSPQPPVDAVEQDYDKKAEDAVDYEDIDEQYE 124
LG +T++ N + L + L VN ++ + + EDAVDY DI+E E
Sbjct: 68 LGSLITELTA-NEE----LAGTDGAL-VN---------DEGWIRSREDAVDYSDINEVAE 112
Score = 95 (38.5 bits), Expect = 6.0e-68, Sum P(5) = 6.0e-68
Identities = 21/56 (37%), Positives = 32/56 (57%)
Query: 521 FSKHSLQNRDMMEGSWLDNIIWEPVDAVGK----PKLILDLQDEQMLFEILDNKDD 572
+S + N D++ G W DNIIW+ A+ + P L LD DE ++ EI D K++
Sbjct: 460 YSIFPIDNEDLVYGRWEDNIIWD-AQAMPRILEPPVLTLDPNDENLILEIPDEKEE 514
Score = 63 (27.2 bits), Expect = 6.0e-68, Sum P(5) = 6.0e-68
Identities = 17/64 (26%), Positives = 29/64 (45%)
Query: 341 GVEQDAATISEHDEQRK---DSCICSEPMKEESNVNPSVGWKSMPSPNFFPLDQHDWEEN 397
GV +D + + RK + I + M + + S G + NF + Q WE++
Sbjct: 349 GVPEDGSGFDYGFKMRKTEHEPAIKCKMMTKLRKLEESNGIDLLADENFLMVTQLHWEDD 408
Query: 398 IVWD 401
I+WD
Sbjct: 409 IIWD 412
Score = 60 (26.2 bits), Expect = 1.3e-62, Sum P(4) = 1.3e-62
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 382 PSPNFFPLDQHD-----WEENIVWD 401
P + FP+D D WE+NI+WD
Sbjct: 458 PWYSIFPIDNEDLVYGRWEDNIIWD 482
Score = 50 (22.7 bits), Expect = 2.2e-06, Sum P(4) = 2.2e-06
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 1220 TANEQIKDPKEEESLIAKRNLSGKVQAMKKNNVQ 1253
T+N K+ K+E SL R L GK +K+ Q
Sbjct: 516 TSNSPSKENKKESSLKKSRILLGKTGVIKEEPQQ 549
Score = 39 (18.8 bits), Expect = 2.0e-60, Sum P(4) = 2.0e-60
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 536 WLDNIIWEPVDAVGK 550
W D+IIW+ D K
Sbjct: 405 WEDDIIWDGEDVKHK 419
Score = 38 (18.4 bits), Expect = 4.6e-18, Sum P(3) = 4.6e-18
Identities = 18/58 (31%), Positives = 28/58 (48%)
Query: 815 AAAKRG--LLPCIGV--DELSVQFPNLSEAIIR-KKLKECAFLRRDGNGKQVWSMKRT 867
A +K G LP G+ + + P+++E + K FLR G GK V S+ R+
Sbjct: 195 AESKDGKLTLPLAGIMQHDATKLLPSVTELFPEFRPGKVLRFLRLFGPGKNVPSVWRS 252
Score = 37 (18.1 bits), Expect = 1.3e-61, Sum P(5) = 1.3e-61
Identities = 15/48 (31%), Positives = 24/48 (50%)
Query: 105 DYDKKAEDAVDYEDIDEQYEGPE------IQIASEEDYLLPKKEYFAA 146
DYD+ DA D EDID + P ++ ++D L +K F++
Sbjct: 133 DYDEDDYDA-DCEDIDCKLMPPPPPPPGPVKKEKDQDGLTGEKVDFSS 179
>UNIPROTKB|P21675 [details] [associations]
symbol:TAF1 "Transcription initiation factor TFIID subunit
1" species:9606 "Homo sapiens" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0046777 "protein
autophosphorylation" evidence=IDA;TAS] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IDA] [GO:0004402
"histone acetyltransferase activity" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0005669 "transcription factor
TFIID complex" evidence=IDA] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=TAS] [GO:0006367 "transcription initiation from
RNA polymerase II promoter" evidence=TAS] [GO:0006368
"transcription elongation from RNA polymerase II promoter"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0044212
"transcription regulatory region DNA binding" evidence=ISS]
[GO:0006352 "DNA-dependent transcription, initiation" evidence=ISS]
[GO:0000117 "regulation of transcription involved in G2/M-phase of
mitotic cell cycle" evidence=ISS] [GO:0043565 "sequence-specific
DNA binding" evidence=ISS] [GO:0060261 "positive regulation of
transcription initiation from RNA polymerase II promoter"
evidence=ISS] [GO:0002039 "p53 binding" evidence=IPI] [GO:0018107
"peptidyl-threonine phosphorylation" evidence=IDA] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=IDA] [GO:0006974 "response to DNA
damage stimulus" evidence=IC] [GO:0070577 "histone acetyl-lysine
binding" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IGI;IDA]
[GO:0051123 "RNA polymerase II transcriptional preinitiation
complex assembly" evidence=ISS] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0018105 "peptidyl-serine
phosphorylation" evidence=IDA] [GO:0017025 "TBP-class protein
binding" evidence=IPI] [GO:0000080 "G1 phase of mitotic cell cycle"
evidence=IGI] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] Reactome:REACT_71 InterPro:IPR001487
InterPro:IPR011177 Pfam:PF00439 PIRSF:PIRSF003047 PRINTS:PR00503
PROSITE:PS50011 PROSITE:PS50014 SMART:SM00297 GO:GO:0005524
Reactome:REACT_116125 GO:GO:0019048 GO:GO:0016032 GO:GO:0004674
GO:GO:0043565 GO:GO:0045944 GO:GO:0046777 GO:GO:0018105
GO:GO:0006974 PROSITE:PS50118 GO:GO:0003713 GO:GO:0018107
GO:GO:0006368 GO:GO:0032436 PDB:3AAD PDBsum:3AAD Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 eggNOG:COG5076 GO:GO:0071339
GO:GO:0070577 InterPro:IPR018359 GO:GO:0000080 GO:GO:0000117
Reactome:REACT_1788 GO:GO:0004402 GO:GO:0005669 GO:GO:0060261
GO:GO:0051123 KO:K03125 InterPro:IPR022591 Pfam:PF12157
Gene3D:1.10.1100.10 InterPro:IPR009067 Pfam:PF09247 SUPFAM:SSF47055
HOVERGEN:HBG050223 OrthoDB:EOG4K3KVC CTD:6872 EMBL:D90359
EMBL:X07024 EMBL:AY623109 EMBL:AB209316 EMBL:AJ549247 EMBL:AJ549248
EMBL:AJ549249 EMBL:AJ549250 EMBL:AJ555148 EMBL:AJ555149
EMBL:AM711894 IPI:IPI00009891 IPI:IPI00645793 IPI:IPI00828032
IPI:IPI00939191 PIR:A40262 RefSeq:NP_004597.2 RefSeq:NP_620278.1
UniGene:Hs.158560 PDB:1EQF PDB:3UV4 PDB:3UV5 PDBsum:1EQF
PDBsum:3UV4 PDBsum:3UV5 ProteinModelPortal:P21675 SMR:P21675
DIP:DIP-147N DIP:DIP-24198N IntAct:P21675 MINT:MINT-1211825
STRING:P21675 PhosphoSite:P21675 DMDM:115942 PaxDb:P21675
PRIDE:P21675 Ensembl:ENST00000276072 Ensembl:ENST00000373790
Ensembl:ENST00000449580 GeneID:6872 KEGG:hsa:6872 UCSC:uc004dzt.4
UCSC:uc004dzu.4 UCSC:uc004dzv.4 GeneCards:GC0XP070586
HGNC:HGNC:11535 HPA:CAB016283 HPA:HPA001075 MIM:313650 MIM:314250
neXtProt:NX_P21675 Orphanet:53351 PharmGKB:PA36310 OMA:DEFYYPK
EvolutionaryTrace:P21675 GenomeRNAi:6872 NextBio:26827
ArrayExpress:P21675 Bgee:P21675 Genevestigator:P21675
GermOnline:ENSG00000147133 Uniprot:P21675
Length = 1872
Score = 448 (162.8 bits), Expect = 1.0e-67, Sum P(5) = 1.0e-67
Identities = 122/362 (33%), Positives = 181/362 (50%)
Query: 621 PNSLIHLIRTKIHLLPRAQKLPGENKSLRPPGAF--KKKSDLSVKDGHVFLMEYCEERPL 678
P+S+ L++ H+ +A+ E ++ F + DL+ KDG + L EY EE
Sbjct: 633 PHSVQPLLK---HIKKKAKMREQERQASGGGEMFFMRTPQDLTGKDGDLILAEYSEENGP 689
Query: 679 LLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLTLEPGDKSPFLGDIKAGCSQS 738
L+ GM + YY K PG GA C G + SPFLG + G
Sbjct: 690 LMMQVGMATKIKNYY-KRKPGKDPGAPDCK----YGETVYCHT---SPFLGSLHPGQLLQ 741
Query: 739 SLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRRIDKVAVVAQQEPLMEVMSPGSKNLQ 798
+ E N++RAP++ HK+ TDFL++R+ +G IR + + VV QQ PL EV P SK
Sbjct: 742 AFENNLFRAPIYLHKMPETDFLIIRTRQGYY-IRELVDIFVVGQQCPLFEVPGPNSKRAN 800
Query: 799 TYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLSEAIIRKKLKECAFLRRDGNG 858
T+ + + V +YR F + R I ++++ FP+ SE+ IRK+LK CA +R G
Sbjct: 801 THIRDFLQVFIYRLFWKSKDRPRR--IRMEDIKKAFPSHSESSIRKRLKLCADFKRTGMD 858
Query: 859 KQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRLKHLGITQLTLPASISSAMSQ 918
W +K F +P+E ++R + PE C+Y SM A RLK G + + A
Sbjct: 859 SNWWVLKSDFRLPTEEEIRAMVSPEQCCAYYSMIAAEQRLKDAGYGEKSFFA-------- 910
Query: 919 LPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSY 978
P+E I+ E++ PWN + F+A LE+TGV DP+G G GFSY
Sbjct: 911 -PEEENEEDFQMKIDDEVRTAPWNTTRAFIAAMKGKC----LLEVTGVADPTGCGEGFSY 965
Query: 979 VR 980
V+
Sbjct: 966 VK 967
Score = 235 (87.8 bits), Expect = 1.0e-67, Sum P(5) = 1.0e-67
Identities = 65/183 (35%), Positives = 95/183 (51%)
Query: 932 IERELQITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRXXXXXXXXXXX 991
I+ E++ PWN + F+A LE+TGV DP+G G GFSYV+
Sbjct: 923 IDDEVRTAPWNTTRAFIAAMKGKC----LLEVTGVADPTGCGEGFSYVKIPNKPTQQKDD 978
Query: 992 XXXXXXXNRGGSTVTGTDADLRRLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSS 1051
TVTGTDADLRRLS++ A+++L KF VPEE I K +RW I ++R +S+
Sbjct: 979 KEPQPVKK----TVTGTDADLRRLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMST 1034
Query: 1052 EQAASG---------------VQLQQQTRGKCQEIWDRQVQSLSAADDDEIGSDSEHSDL 1096
EQA SG + Q++ + +CQ I+D Q + LS+ + +DS ++
Sbjct: 1035 EQARSGEGPMSKFARGSRFSVAEHQERYKEECQRIFDLQNKVLSSTEVLSTDTDSSSAED 1094
Query: 1097 DSF 1099
F
Sbjct: 1095 SDF 1097
Score = 95 (38.5 bits), Expect = 1.0e-67, Sum P(5) = 1.0e-67
Identities = 21/56 (37%), Positives = 32/56 (57%)
Query: 521 FSKHSLQNRDMMEGSWLDNIIWEPVDAVGK----PKLILDLQDEQMLFEILDNKDD 572
+S + N D++ G W DNIIW+ A+ + P L LD DE ++ EI D K++
Sbjct: 465 YSIFPIDNEDLVYGRWEDNIIWD-AQAMPRLLEPPVLTLDPNDENLILEIPDEKEE 519
Score = 95 (38.5 bits), Expect = 1.0e-67, Sum P(5) = 1.0e-67
Identities = 36/103 (34%), Positives = 56/103 (54%)
Query: 26 SGGN--RLLGFMFGNVDYAGDLDVD-YLDEDAKEHLAAV-ADKLGPSLTDIDVWNSQSCF 81
+GG L GF+FGN++ AG L+ + LD++ K+HLA + A LG +T++ N +
Sbjct: 31 AGGGPFSLAGFLFGNINGAGQLEGESVLDDECKKHLAGLGALGLGSLITELTA-NEE--- 86
Query: 82 QLFCSYCLLSVNSPQPPVDAVEQDYDKKAEDAVDYEDIDEQYE 124
L + L VN ++ + + EDAVDY DI+E E
Sbjct: 87 -LTGTDGAL-VN---------DEGWVRSTEDAVDYSDINEVAE 118
Score = 64 (27.6 bits), Expect = 1.0e-67, Sum P(5) = 1.0e-67
Identities = 17/64 (26%), Positives = 30/64 (46%)
Query: 341 GVEQDAATISEHDEQRK---DSCICSEPMKEESNVNPSVGWKSMPSPNFFPLDQHDWEEN 397
GV +D + + RK + I S ++E + + G + NF + Q WE++
Sbjct: 354 GVPEDGSGFDYGFKLRKTEHEPVIKSRMIEEFRKLEENNGTDLLADENFLMVTQLHWEDD 413
Query: 398 IVWD 401
I+WD
Sbjct: 414 IIWD 417
Score = 60 (26.2 bits), Expect = 2.7e-62, Sum P(4) = 2.7e-62
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 382 PSPNFFPLDQHD-----WEENIVWD 401
P + FP+D D WE+NI+WD
Sbjct: 463 PWYSIFPIDNEDLVYGRWEDNIIWD 487
Score = 51 (23.0 bits), Expect = 2.9e-06, Sum P(4) = 2.9e-06
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 1220 TANEQIKDPKEEESLIAKRNLSGKVQAMKKNNVQ 1253
T+N K+ K+E SL R L GK +K+ Q
Sbjct: 521 TSNSPSKESKKESSLKKSRILLGKTGVIKEEPQQ 554
Score = 46 (21.3 bits), Expect = 1.4e-18, Sum P(3) = 1.4e-18
Identities = 22/76 (28%), Positives = 34/76 (44%)
Query: 822 LPCIGV--DELSVQFPNLSEAIIR-KKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRK 878
LP G+ + + P+++E + K FLR G GK V S+ R+ + R+
Sbjct: 209 LPLAGIMQHDATKLLPSVTELFPEFRPGKVLRFLRLFGPGKNVPSVWRSARRKRKKKHRE 268
Query: 879 LAYPEHV----CSYES 890
L E + CS ES
Sbjct: 269 LIQEEQIQEVECSVES 284
Score = 39 (18.8 bits), Expect = 6.3e-62, Sum P(5) = 6.3e-62
Identities = 13/37 (35%), Positives = 16/37 (43%)
Query: 38 NVDYAGDLDVDY-LDEDAKEHLAAVADKLGPSLTDID 73
N DYA + L +D +A V K S DID
Sbjct: 293 NYDYAPPPPPEQCLSDDEITMMAPVESKFSQSTGDID 329
Score = 39 (18.8 bits), Expect = 4.2e-60, Sum P(4) = 4.2e-60
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 536 WLDNIIWEPVDAVGK 550
W D+IIW+ D K
Sbjct: 410 WEDDIIWDGEDVKHK 424
>UNIPROTKB|B1Q2X3 [details] [associations]
symbol:N-TAF1 "TAF1 RNA polymerase II, TATA box binding
protein (TBP)-associated factor, neuron specific isoform"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005669 "transcription factor TFIID complex" evidence=IEA]
[GO:0006352 "DNA-dependent transcription, initiation" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR001487 InterPro:IPR011177
Pfam:PF00439 PIRSF:PIRSF003047 PRINTS:PR00503 PROSITE:PS50014
SMART:SM00297 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
GO:GO:0006352 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0005669 EMBL:AL590762 InterPro:IPR022591
Pfam:PF12157 Gene3D:1.10.1100.10 InterPro:IPR009067 Pfam:PF09247
SUPFAM:SSF47055 HOGENOM:HOG000020066 HOVERGEN:HBG050223
UniGene:Hs.158560 HGNC:HGNC:11535 EMBL:AL590763 EMBL:AB300418
IPI:IPI00149098 SMR:B1Q2X3 STRING:B1Q2X3 Ensembl:ENST00000423759
Uniprot:B1Q2X3
Length = 1895
Score = 448 (162.8 bits), Expect = 1.1e-67, Sum P(5) = 1.1e-67
Identities = 122/362 (33%), Positives = 181/362 (50%)
Query: 621 PNSLIHLIRTKIHLLPRAQKLPGENKSLRPPGAF--KKKSDLSVKDGHVFLMEYCEERPL 678
P+S+ L++ H+ +A+ E ++ F + DL+ KDG + L EY EE
Sbjct: 654 PHSVQPLLK---HIKKKAKMREQERQASGGGEMFFMRTPQDLTGKDGDLILAEYSEENGP 710
Query: 679 LLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLTLEPGDKSPFLGDIKAGCSQS 738
L+ GM + YY K PG GA C G + SPFLG + G
Sbjct: 711 LMMQVGMATKIKNYY-KRKPGKDPGAPDCK----YGETVYCHT---SPFLGSLHPGQLLQ 762
Query: 739 SLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRRIDKVAVVAQQEPLMEVMSPGSKNLQ 798
+ E N++RAP++ HK+ TDFL++R+ +G IR + + VV QQ PL EV P SK
Sbjct: 763 AFENNLFRAPIYLHKMPETDFLIIRTRQGYY-IRELVDIFVVGQQCPLFEVPGPNSKRAN 821
Query: 799 TYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLSEAIIRKKLKECAFLRRDGNG 858
T+ + + V +YR F + R I ++++ FP+ SE+ IRK+LK CA +R G
Sbjct: 822 THIRDFLQVFIYRLFWKSKDRPRR--IRMEDIKKAFPSHSESSIRKRLKLCADFKRTGMD 879
Query: 859 KQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRLKHLGITQLTLPASISSAMSQ 918
W +K F +P+E ++R + PE C+Y SM A RLK G + + A
Sbjct: 880 SNWWVLKSDFRLPTEEEIRAMVSPEQCCAYYSMIAAEQRLKDAGYGEKSFFA-------- 931
Query: 919 LPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSY 978
P+E I+ E++ PWN + F+A LE+TGV DP+G G GFSY
Sbjct: 932 -PEEENEEDFQMKIDDEVRTAPWNTTRAFIAAMKGKC----LLEVTGVADPTGCGEGFSY 986
Query: 979 VR 980
V+
Sbjct: 987 VK 988
Score = 235 (87.8 bits), Expect = 1.1e-67, Sum P(5) = 1.1e-67
Identities = 65/183 (35%), Positives = 95/183 (51%)
Query: 932 IERELQITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRXXXXXXXXXXX 991
I+ E++ PWN + F+A LE+TGV DP+G G GFSYV+
Sbjct: 944 IDDEVRTAPWNTTRAFIAAMKGKC----LLEVTGVADPTGCGEGFSYVKIPNKPTQQKDD 999
Query: 992 XXXXXXXNRGGSTVTGTDADLRRLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSS 1051
TVTGTDADLRRLS++ A+++L KF VPEE I K +RW I ++R +S+
Sbjct: 1000 KEPQPVKK----TVTGTDADLRRLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMST 1055
Query: 1052 EQAASG---------------VQLQQQTRGKCQEIWDRQVQSLSAADDDEIGSDSEHSDL 1096
EQA SG + Q++ + +CQ I+D Q + LS+ + +DS ++
Sbjct: 1056 EQARSGEGPMSKFARGSRFSVAEHQERYKEECQRIFDLQNKVLSSTEVLSTDTDSSSAED 1115
Query: 1097 DSF 1099
F
Sbjct: 1116 SDF 1118
Score = 95 (38.5 bits), Expect = 1.1e-67, Sum P(5) = 1.1e-67
Identities = 21/56 (37%), Positives = 32/56 (57%)
Query: 521 FSKHSLQNRDMMEGSWLDNIIWEPVDAVGK----PKLILDLQDEQMLFEILDNKDD 572
+S + N D++ G W DNIIW+ A+ + P L LD DE ++ EI D K++
Sbjct: 486 YSIFPIDNEDLVYGRWEDNIIWD-AQAMPRLLEPPVLTLDPNDENLILEIPDEKEE 540
Score = 95 (38.5 bits), Expect = 1.1e-67, Sum P(5) = 1.1e-67
Identities = 36/103 (34%), Positives = 56/103 (54%)
Query: 26 SGGN--RLLGFMFGNVDYAGDLDVD-YLDEDAKEHLAAV-ADKLGPSLTDIDVWNSQSCF 81
+GG L GF+FGN++ AG L+ + LD++ K+HLA + A LG +T++ N +
Sbjct: 31 AGGGPFSLAGFLFGNINGAGQLEGESVLDDECKKHLAGLGALGLGSLITELTA-NEE--- 86
Query: 82 QLFCSYCLLSVNSPQPPVDAVEQDYDKKAEDAVDYEDIDEQYE 124
L + L VN ++ + + EDAVDY DI+E E
Sbjct: 87 -LTGTDGAL-VN---------DEGWVRSTEDAVDYSDINEVAE 118
Score = 64 (27.6 bits), Expect = 1.1e-67, Sum P(5) = 1.1e-67
Identities = 17/64 (26%), Positives = 30/64 (46%)
Query: 341 GVEQDAATISEHDEQRK---DSCICSEPMKEESNVNPSVGWKSMPSPNFFPLDQHDWEEN 397
GV +D + + RK + I S ++E + + G + NF + Q WE++
Sbjct: 375 GVPEDGSGFDYGFKLRKTEHEPVIKSRMIEEFRKLEENNGTDLLADENFLMVTQLHWEDD 434
Query: 398 IVWD 401
I+WD
Sbjct: 435 IIWD 438
Score = 60 (26.2 bits), Expect = 2.9e-62, Sum P(4) = 2.9e-62
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 382 PSPNFFPLDQHD-----WEENIVWD 401
P + FP+D D WE+NI+WD
Sbjct: 484 PWYSIFPIDNEDLVYGRWEDNIIWD 508
Score = 51 (23.0 bits), Expect = 3.0e-06, Sum P(4) = 3.0e-06
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 1220 TANEQIKDPKEEESLIAKRNLSGKVQAMKKNNVQ 1253
T+N K+ K+E SL R L GK +K+ Q
Sbjct: 542 TSNSPSKESKKESSLKKSRILLGKTGVIKEEPQQ 575
Score = 46 (21.3 bits), Expect = 1.5e-18, Sum P(3) = 1.5e-18
Identities = 22/76 (28%), Positives = 34/76 (44%)
Query: 822 LPCIGV--DELSVQFPNLSEAIIR-KKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRK 878
LP G+ + + P+++E + K FLR G GK V S+ R+ + R+
Sbjct: 230 LPLAGIMQHDATKLLPSVTELFPEFRPGKVLRFLRLFGPGKNVPSVWRSARRKRKKKHRE 289
Query: 879 LAYPEHV----CSYES 890
L E + CS ES
Sbjct: 290 LIQEEQIQEVECSVES 305
Score = 39 (18.8 bits), Expect = 6.9e-62, Sum P(5) = 6.9e-62
Identities = 13/37 (35%), Positives = 16/37 (43%)
Query: 38 NVDYAGDLDVDY-LDEDAKEHLAAVADKLGPSLTDID 73
N DYA + L +D +A V K S DID
Sbjct: 314 NYDYAPPPPPEQCLSDDEITMMAPVESKFSQSTGDID 350
Score = 39 (18.8 bits), Expect = 4.5e-60, Sum P(4) = 4.5e-60
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 536 WLDNIIWEPVDAVGK 550
W D+IIW+ D K
Sbjct: 431 WEDDIIWDGEDVKHK 445
>UNIPROTKB|F1MF62 [details] [associations]
symbol:TAF1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045120 "pronucleus" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA] [GO:0005669 "transcription
factor TFIID complex" evidence=IEA] InterPro:IPR001487
InterPro:IPR011177 Pfam:PF00439 PIRSF:PIRSF003047 PRINTS:PR00503
PROSITE:PS50014 SMART:SM00297 GO:GO:0006355 GO:GO:0003677
GO:GO:0006352 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0045120 GO:GO:0005669 InterPro:IPR022591
Pfam:PF12157 Gene3D:1.10.1100.10 InterPro:IPR009067 Pfam:PF09247
SUPFAM:SSF47055 GeneTree:ENSGT00390000012659 OMA:DEFYYPK
EMBL:DAAA02072840 IPI:IPI00715936 Ensembl:ENSBTAT00000061423
ArrayExpress:F1MF62 Uniprot:F1MF62
Length = 1882
Score = 448 (162.8 bits), Expect = 1.3e-67, Sum P(5) = 1.3e-67
Identities = 122/362 (33%), Positives = 181/362 (50%)
Query: 621 PNSLIHLIRTKIHLLPRAQKLPGENKSLRPPGAF--KKKSDLSVKDGHVFLMEYCEERPL 678
P+S+ L++ H+ +A+ E ++ F + DL+ KDG + L EY EE
Sbjct: 642 PHSVQPLLK---HIKKKAKMREQERQASGGGEMFFMRTPQDLTGKDGDLILAEYSEENGP 698
Query: 679 LLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLTLEPGDKSPFLGDIKAGCSQS 738
L+ GM + YY K PG GA C G + SPFLG + G
Sbjct: 699 LMMQVGMATKIKNYY-KRKPGKDPGAPDCK----YGETVYCHT---SPFLGSLHPGQLLQ 750
Query: 739 SLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRRIDKVAVVAQQEPLMEVMSPGSKNLQ 798
+ E N++RAP++ HK+ TDFL++R+ +G IR + + VV QQ PL EV P SK
Sbjct: 751 AFENNLFRAPIYLHKMPETDFLIIRTRQGYY-IRELVDIFVVGQQCPLFEVPGPNSKRAN 809
Query: 799 TYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLSEAIIRKKLKECAFLRRDGNG 858
T+ + + V +YR F + R I ++++ FP+ SE+ IRK+LK CA +R G
Sbjct: 810 THIRDFLQVFIYRLFWKSKDRPRR--IRMEDIKKAFPSHSESSIRKRLKLCADFKRTGMD 867
Query: 859 KQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRLKHLGITQLTLPASISSAMSQ 918
W +K F +P+E ++R + PE C+Y SM A RLK G + + A
Sbjct: 868 SNWWVLKSDFRLPTEEEIRAMVSPEQCCAYYSMIAAEQRLKDAGYGEKSFFA-------- 919
Query: 919 LPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSY 978
P+E I+ E++ PWN + F+A LE+TGV DP+G G GFSY
Sbjct: 920 -PEEENEEDFQMKIDDEVRTAPWNTTRAFIAAMKGKC----LLEVTGVADPTGCGEGFSY 974
Query: 979 VR 980
V+
Sbjct: 975 VK 976
Score = 235 (87.8 bits), Expect = 1.3e-67, Sum P(5) = 1.3e-67
Identities = 65/183 (35%), Positives = 95/183 (51%)
Query: 932 IERELQITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRXXXXXXXXXXX 991
I+ E++ PWN + F+A LE+TGV DP+G G GFSYV+
Sbjct: 932 IDDEVRTAPWNTTRAFIAAMKGKC----LLEVTGVADPTGCGEGFSYVKIPNKPTQQKDD 987
Query: 992 XXXXXXXNRGGSTVTGTDADLRRLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSS 1051
TVTGTDADLRRLS++ A+++L KF VPEE I K +RW I ++R +S+
Sbjct: 988 KEPQPVKK----TVTGTDADLRRLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMST 1043
Query: 1052 EQAASG---------------VQLQQQTRGKCQEIWDRQVQSLSAADDDEIGSDSEHSDL 1096
EQA SG + Q++ + +CQ I+D Q + LS+ + +DS ++
Sbjct: 1044 EQARSGEGPMSKFARGSRFSVAEHQERYKEECQRIFDLQNKVLSSTEILSTDTDSSSAED 1103
Query: 1097 DSF 1099
F
Sbjct: 1104 SDF 1106
Score = 104 (41.7 bits), Expect = 1.3e-67, Sum P(5) = 1.3e-67
Identities = 39/121 (32%), Positives = 59/121 (48%)
Query: 7 GSASKXXXXXXXXXXXXXVSGGN-RLLGFMFGNVDYAGDLDVD-YLDEDAKEHLAAV-AD 63
GSA+ GG L GF+FGN++ AG L+ + LD++ K+HLA + A
Sbjct: 1 GSAAAAAIMSDTDSDEDSAGGGPFSLAGFLFGNINGAGQLEGESVLDDECKKHLAGLGAL 60
Query: 64 KLGPSLTDIDVWNSQSCFQLFCSYCLLSVNSPQPPVDAVEQDYDKKAEDAVDYEDIDEQY 123
LG +T++ N + L + L VN ++ + + EDAVDY DI+E
Sbjct: 61 GLGSLITELTA-NEE----LTGTDAAL-VN---------DEGWVRSTEDAVDYSDINEVA 105
Query: 124 E 124
E
Sbjct: 106 E 106
Score = 90 (36.7 bits), Expect = 1.3e-67, Sum P(5) = 1.3e-67
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 521 FSKHSLQNRDMMEGSWLDNIIWEPVDAVGK----PKLILDLQDEQMLFEILDNKDD 572
+S + N +++ G W DNIIW+ A+ + P L LD DE ++ EI D K++
Sbjct: 474 YSIFPIDNEELVYGRWEDNIIWD-AQAMPRFLEPPILTLDPNDENLILEIPDEKEE 528
Score = 59 (25.8 bits), Expect = 1.3e-67, Sum P(5) = 1.3e-67
Identities = 12/37 (32%), Positives = 19/37 (51%)
Query: 366 MKEESNV-NPSVGWKSMPSPNFFPLDQHDWEENIVWD 401
M +E + S G + NF + Q WE++I+WD
Sbjct: 390 MADEYRIPEESSGTDLLADENFLMVTQLHWEDDIIWD 426
Score = 56 (24.8 bits), Expect = 8.5e-63, Sum P(4) = 8.5e-63
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 382 PSPNFFPLDQHD-----WEENIVWD 401
P + FP+D + WE+NI+WD
Sbjct: 472 PWYSIFPIDNEELVYGRWEDNIIWD 496
Score = 51 (23.0 bits), Expect = 3.4e-06, Sum P(4) = 3.4e-06
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 1220 TANEQIKDPKEEESLIAKRNLSGKVQAMKKNNVQ 1253
T+N K+ K+E SL R L GK +K+ Q
Sbjct: 530 TSNSPSKESKKESSLKKSRILLGKTGVIKEEPQQ 563
Score = 46 (21.3 bits), Expect = 1.7e-19, Sum P(3) = 1.7e-19
Identities = 22/76 (28%), Positives = 34/76 (44%)
Query: 822 LPCIGV--DELSVQFPNLSEAIIR-KKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRK 878
LP G+ + + P+++E + K FLR G GK V S+ R+ + R+
Sbjct: 218 LPLAGIMQHDATKLLPSVTELFPEFRPGKVLRFLRLFGPGKNVPSVWRSARRKRKKKHRE 277
Query: 879 LAYPEHV----CSYES 890
L E + CS ES
Sbjct: 278 LIQEEQIQETECSVES 293
Score = 43 (20.2 bits), Expect = 2.7e-61, Sum P(5) = 2.7e-61
Identities = 22/82 (26%), Positives = 33/82 (40%)
Query: 39 VDYAGDLDVDYLDEDAKEHLAAVADKLGPSL-TDIDVWNSQS-CFQLFCSYCLLSVNSPQ 96
VDY+ D++ + ED L P D D + + C + C + P
Sbjct: 96 VDYS---DINEVAEDESRRYQQTMGSLQPLCHADYDEDDYDADCEDIDCKL----MPPPP 148
Query: 97 PPVDAVEQDYDKKAEDAVDYED 118
PP V++D D+ A V ED
Sbjct: 149 PPPGPVKKDKDQDAIAGVS-ED 169
Score = 39 (18.8 bits), Expect = 5.0e-61, Sum P(4) = 5.0e-61
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 536 WLDNIIWEPVDAVGK 550
W D+IIW+ D K
Sbjct: 419 WEDDIIWDGEDVKHK 433
>ZFIN|ZDB-GENE-030131-5576 [details] [associations]
symbol:taf1 "TAF1 RNA polymerase II, TATA box
binding protein (TBP)-associated factor" species:7955 "Danio rerio"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=IEA]
InterPro:IPR001487 InterPro:IPR011177 Pfam:PF00439
PIRSF:PIRSF003047 PRINTS:PR00503 PROSITE:PS50014 SMART:SM00297
ZFIN:ZDB-GENE-030131-5576 GO:GO:0006355 GO:GO:0003677 GO:GO:0006352
EMBL:BX005407 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0005669 KO:K03125 InterPro:IPR022591
Pfam:PF12157 Gene3D:1.10.1100.10 InterPro:IPR009067 Pfam:PF09247
SUPFAM:SSF47055 HOGENOM:HOG000020066 HOVERGEN:HBG050223 CTD:6872
GeneTree:ENSGT00390000012659 OMA:DEFYYPK IPI:IPI00499221
RefSeq:NP_001038250.1 UniGene:Dr.104785 SMR:Q1LYC2
Ensembl:ENSDART00000051196 GeneID:555452 KEGG:dre:555452
InParanoid:Q1LYC2 NextBio:20880984 Uniprot:Q1LYC2
Length = 1947
Score = 443 (161.0 bits), Expect = 1.5e-67, Sum P(5) = 1.5e-67
Identities = 119/358 (33%), Positives = 178/358 (49%)
Query: 626 HLIRTKI-HLLPRAQKLPGENKSLRPPGAF--KKKSDLSVKDGHVFLMEYCEERPLLLSN 682
H ++ + H+ +A+ E ++ F + DL+ KDG + L EY EE P L
Sbjct: 686 HAVQPLLKHIKKKAKMREQERQASGGGDMFFMRTAQDLTGKDGDLVLAEYSEEYPPLHMQ 745
Query: 683 AGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLTLEPGDKSPFLGDIKAGCSQSSLET 742
GM + + YY K PG GA C G + SPFLG + G + E
Sbjct: 746 VGMASKIKNYY-KRKPGKDPGAPDCK----YGETVYCHT---SPFLGSLHPGQLLQAFEN 797
Query: 743 NMYRAPVFTHKVATTDFLLVRSAKGKISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSI 802
N++RAP++ HK+ TDFL++R+ +G IR + + VV Q+ PL EV P SK T+
Sbjct: 798 NLFRAPIYLHKMPETDFLIIRTRQGYF-IRELVDIFVVGQECPLYEVPGPNSKRANTHIR 856
Query: 803 NRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVW 862
+ + V +YR F + R I ++++ FP+ SE+ IRK+LK CA +R G W
Sbjct: 857 DFLQVFIYRLFWKSKDRPRR--IRMEDIKKAFPSHSESSIRKRLKLCADFKRTGMDSNWW 914
Query: 863 SMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDE 922
+K F +P+E ++R + PE C+Y SM RLK G + + A P+E
Sbjct: 915 VLKPDFRLPTEEEIRAMVSPEQCCAYYSMLVAEQRLKDAGYGEKSFFA---------PEE 965
Query: 923 AIALAAASHIERELQITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVR 980
I+ E++ PWN + F+A LE+TGV DP+G G GFSYV+
Sbjct: 966 ENEEEFQMKIDDEVRTAPWNTTRAFIAAMKGKC----LLEVTGVADPTGCGEGFSYVK 1019
Score = 231 (86.4 bits), Expect = 1.5e-67, Sum P(5) = 1.5e-67
Identities = 64/183 (34%), Positives = 94/183 (51%)
Query: 932 IERELQITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRXXXXXXXXXXX 991
I+ E++ PWN + F+A LE+TGV DP+G G GFSYV+
Sbjct: 975 IDDEVRTAPWNTTRAFIAAMKGKC----LLEVTGVADPTGCGEGFSYVKVPNKPTQQKDD 1030
Query: 992 XXXXXXXNRGGSTVTGTDADLRRLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSS 1051
TVTGTDADLRRLS++ A+++L KF VPEE I K +RW I ++R +S+
Sbjct: 1031 REPQPVKK----TVTGTDADLRRLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMST 1086
Query: 1052 EQAASG---------------VQLQQQTRGKCQEIWDRQVQSLSAADDDEIGSDSEHSDL 1096
EQA SG + Q++ + +CQ I+D Q + L + + +DS ++
Sbjct: 1087 EQARSGEGPMSKFARGSRFSVAEHQERYKEECQRIFDLQNKVLESTEVLSTDTDSSSAED 1146
Query: 1097 DSF 1099
F
Sbjct: 1147 SDF 1149
Score = 108 (43.1 bits), Expect = 1.5e-67, Sum P(5) = 1.5e-67
Identities = 33/96 (34%), Positives = 48/96 (50%)
Query: 31 LLGFMFGNVDYAGDLDVD-YLDEDAKEHLAAVADK-LGPSLTDIDVWNSQSCFQLFCSYC 88
L GF+FGN++ G L+ D LD ++K+HLA + LG +T+I ++ Q
Sbjct: 16 LTGFLFGNINENGQLEDDSVLDTESKKHLAGLGTLGLGSLITEITASEEETAEQ------ 69
Query: 89 LLSVNSPQPPVDAVEQDYDKKAEDAVDYEDIDEQYE 124
Q DA + + + EDAVDY DI E E
Sbjct: 70 ----EQDQSSTDA--EGWVRSTEDAVDYSDISEVAE 99
Score = 101 (40.6 bits), Expect = 1.5e-67, Sum P(5) = 1.5e-67
Identities = 22/71 (30%), Positives = 38/71 (53%)
Query: 505 KENVSIKLCQSDAVKRFSKHSLQNRDMMEGSWLDNIIWEP--VDAVGKPKLI-LDLQDEQ 561
K N ++ D FS + N +++ G W DNIIW+ +D + P ++ L+ DE
Sbjct: 501 KHNHDHQVSHEDDTPWFSIFPIDNEELVYGRWEDNIIWDDQNMDCIPSPPVLTLNPNDEN 560
Query: 562 MLFEILDNKDD 572
++ EI D K++
Sbjct: 561 IILEIPDEKEE 571
Score = 56 (24.8 bits), Expect = 3.7e-62, Sum P(4) = 3.7e-62
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 385 NFFPLDQHD-----WEENIVWDN 402
+ FP+D + WE+NI+WD+
Sbjct: 518 SIFPIDNEELVYGRWEDNIIWDD 540
Score = 54 (24.1 bits), Expect = 1.5e-67, Sum P(5) = 1.5e-67
Identities = 26/118 (22%), Positives = 44/118 (37%)
Query: 363 SEPMKEESNVNPSVGWKSMPSPN----FFPLDQHDWEENIVWDNSPAASDNS-IESHEIA 417
SEP+ E+ S +P F + Q WEE+I+W+ + + +A
Sbjct: 394 SEPVPEQEPPQESQDKADEDAPMQDELFLMVTQLQWEEDIIWNGEDVKHKGTKTQRASLA 453
Query: 418 GADVESALMRGIELDTGQNNFHERSTSPNEKDCIVNMQNSPVLSETFGSKSSSDNTSH 475
G + +++ R Q RS S + +P ++ GSK N H
Sbjct: 454 GW-LPTSMTRNANAYNAQQGL-SRSNSQLVPPTPPPLTKTPSIT---GSKRDKHNHDH 506
Score = 39 (18.8 bits), Expect = 5.9e-06, Sum P(4) = 5.9e-06
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 1220 TANEQIKDPKEEESLIAKRNLSGKVQAMK 1248
T++ K+ K+E +L R L GK +K
Sbjct: 573 TSHSPSKENKKETALKKSRILLGKTGVIK 601
Score = 37 (18.1 bits), Expect = 1.9e-59, Sum P(4) = 1.9e-59
Identities = 18/68 (26%), Positives = 29/68 (42%)
Query: 93 NSPQPPVDAVEQDYDKKAEDAVDYEDID---EQYEGPEIQIASEEDYLLPKKEYFAAEVS 149
+ P P + ++ DK EDA +++ Q + E I + ED + K S
Sbjct: 394 SEPVPEQEPPQESQDKADEDAPMQDELFLMVTQLQWEEDIIWNGED--VKHKGTKTQRAS 451
Query: 150 LAALKPTA 157
LA PT+
Sbjct: 452 LAGWLPTS 459
>UNIPROTKB|Q8IZX4 [details] [associations]
symbol:TAF1L "Transcription initiation factor TFIID subunit
1-like" species:9606 "Homo sapiens" [GO:0005669 "transcription
factor TFIID complex" evidence=IEA] [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0005575
"cellular_component" evidence=ND] [GO:0004402 "histone
acetyltransferase activity" evidence=ISS] [GO:0004674 "protein
serine/threonine kinase activity" evidence=ISS] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0007140 "male meiosis" evidence=IEP] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0070577 "histone acetyl-lysine
binding" evidence=IDA] [GO:0016573 "histone acetylation"
evidence=ISS] InterPro:IPR001487 InterPro:IPR011177 Pfam:PF00439
PIRSF:PIRSF003047 PRINTS:PR00503 PROSITE:PS50014 SMART:SM00297
GO:GO:0045893 GO:GO:0003677 GO:GO:0004674 GO:GO:0006352
GO:GO:0006357 GO:GO:0007140 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 eggNOG:COG5076 GO:GO:0070577 InterPro:IPR018359
GO:GO:0004402 GO:GO:0005669 KO:K03125 InterPro:IPR022591
Pfam:PF12157 Gene3D:1.10.1100.10 InterPro:IPR009067 Pfam:PF09247
SUPFAM:SSF47055 EMBL:AF390562 IPI:IPI00100867 RefSeq:NP_722516.1
UniGene:Hs.591086 PDB:3HMH PDBsum:3HMH ProteinModelPortal:Q8IZX4
SMR:Q8IZX4 IntAct:Q8IZX4 STRING:Q8IZX4 PhosphoSite:Q8IZX4
DMDM:57013082 PaxDb:Q8IZX4 PRIDE:Q8IZX4 Ensembl:ENST00000242310
GeneID:138474 KEGG:hsa:138474 UCSC:uc003zrg.1 CTD:138474
GeneCards:GC09M032619 H-InvDB:HIX0169078 HGNC:HGNC:18056 MIM:607798
neXtProt:NX_Q8IZX4 PharmGKB:PA134947802 HOGENOM:HOG000020066
HOVERGEN:HBG050223 InParanoid:Q8IZX4 OMA:VIREEPQ OrthoDB:EOG4K3KVC
PhylomeDB:Q8IZX4 EvolutionaryTrace:Q8IZX4 GenomeRNAi:138474
NextBio:83796 CleanEx:HS_TAF1L Genevestigator:Q8IZX4
GermOnline:ENSG00000122728 Uniprot:Q8IZX4
Length = 1826
Score = 440 (159.9 bits), Expect = 5.1e-67, Sum P(5) = 5.1e-67
Identities = 122/362 (33%), Positives = 179/362 (49%)
Query: 621 PNSLIHLIRTKIHLLPRAQKLPGENKSLRPPGAF--KKKSDLSVKDGHVFLMEYCEERPL 678
P+S+ L++ H+ +A+ E ++ F + DL+ KDG + L EY EE
Sbjct: 652 PHSVQPLLK---HIKKKAKMREQERQASGGGELFFMRTPQDLTGKDGDLILAEYSEENGP 708
Query: 679 LLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLTLEPGDKSPFLGDIKAGCSQS 738
L+ GM + YY K PG GA C G + SPFLG + G
Sbjct: 709 LMMQVGMATKIKNYY-KRKPGKDPGAPDCK----YGETVYCHT---SPFLGSLHPGQLLQ 760
Query: 739 SLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRRIDKVAVVAQQEPLMEVMSPGSKNLQ 798
+LE N++RAPV+ HK+ TDFL++R+ +G IR + + VV QQ PL EV P S+
Sbjct: 761 ALENNLFRAPVYLHKMPETDFLIIRTRQGYY-IRELVDIFVVGQQCPLFEVPGPNSRRAN 819
Query: 799 TYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLSEAIIRKKLKECAFLRRDGNG 858
+ + + V +YR F + R I ++++ FP+ SE+ IRK+LK CA +R G
Sbjct: 820 MHIRDFLQVFIYRLFWKSKDRPRR--IRMEDIKKAFPSHSESSIRKRLKLCADFKRTGMD 877
Query: 859 KQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRLKHLGITQLTLPASISSAMSQ 918
W +K F +P+E ++R PE C+Y SM A RLK G + + A
Sbjct: 878 SNWWVLKSDFRLPTEEEIRAKVSPEQCCAYYSMIAAKQRLKDAGYGEKSFFA-------- 929
Query: 919 LPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSY 978
P+E I+ E+ PWN + F+A LE+TGV DP+G G GFSY
Sbjct: 930 -PEEENEEDFQMKIDDEVHAAPWNTTRAFIAAMKGKC----LLEVTGVADPTGCGEGFSY 984
Query: 979 VR 980
V+
Sbjct: 985 VK 986
Score = 232 (86.7 bits), Expect = 5.1e-67, Sum P(5) = 5.1e-67
Identities = 65/183 (35%), Positives = 94/183 (51%)
Query: 932 IERELQITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRXXXXXXXXXXX 991
I+ E+ PWN + F+A LE+TGV DP+G G GFSYV+
Sbjct: 942 IDDEVHAAPWNTTRAFIAAMKGKC----LLEVTGVADPTGCGEGFSYVKIPNKPTQQKDD 997
Query: 992 XXXXXXXNRGGSTVTGTDADLRRLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSS 1051
TVTGTDADLRRLS++ A+++L KF VPEE I K +RW I ++R +S+
Sbjct: 998 KEPQAVKK----TVTGTDADLRRLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMST 1053
Query: 1052 EQAASG---------------VQLQQQTRGKCQEIWDRQVQSLSAADDDEIGSDSEHSDL 1096
EQA SG + Q++ + +CQ I+D Q + LS+ + +DS ++
Sbjct: 1054 EQAHSGEGPMSKFARGSRFSVAEHQERYKEECQRIFDLQNKVLSSTEVLSTDTDSISAED 1113
Query: 1097 DSF 1099
F
Sbjct: 1114 SDF 1116
Score = 95 (38.5 bits), Expect = 5.1e-67, Sum P(5) = 5.1e-67
Identities = 21/56 (37%), Positives = 32/56 (57%)
Query: 521 FSKHSLQNRDMMEGSWLDNIIWEPVDAVGK----PKLILDLQDEQMLFEILDNKDD 572
+S + N D++ G W DNIIW+ A+ + P L LD DE ++ EI D K++
Sbjct: 484 YSIFPIDNEDLVYGRWEDNIIWD-AQAMPRLLEPPVLALDPNDENLILEIPDEKEE 538
Score = 91 (37.1 bits), Expect = 5.1e-67, Sum P(5) = 5.1e-67
Identities = 36/103 (34%), Positives = 54/103 (52%)
Query: 26 SGGN--RLLGFMFGNVDYAGDLDVD-YLDEDAKEHLAAV-ADKLGPSLTDIDVWNSQSCF 81
SGG L G +FGN+ AG L+ + LD++ K+HLA + A LG +T++ N +
Sbjct: 30 SGGGPFTLAGILFGNISGAGQLEGESVLDDECKKHLAGLGALGLGSLITELTA-NEE--- 85
Query: 82 QLFCSYCLLSVNSPQPPVDAVEQDYDKKAEDAVDYEDIDEQYE 124
L + L VN ++ + + EDAVDY DI+E E
Sbjct: 86 -LTGTGGAL-VN---------DEGWIRSTEDAVDYSDINEVAE 117
Score = 72 (30.4 bits), Expect = 5.1e-67, Sum P(5) = 5.1e-67
Identities = 19/64 (29%), Positives = 30/64 (46%)
Query: 341 GVEQDAATISEHDEQRK---DSCICSEPMKEESNVNPSVGWKSMPSPNFFPLDQHDWEEN 397
GV +D + + RK + I S M+E + S G + NF + Q WE++
Sbjct: 373 GVSEDGSGFDYGFKLRKTQHEPVIKSRMMEEFRKLEESNGTDLLADENFLMVTQLHWEDS 432
Query: 398 IVWD 401
I+WD
Sbjct: 433 IIWD 436
Score = 60 (26.2 bits), Expect = 9.6e-61, Sum P(4) = 9.6e-61
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 382 PSPNFFPLDQHD-----WEENIVWD 401
P + FP+D D WE+NI+WD
Sbjct: 482 PWYSIFPIDNEDLVYGRWEDNIIWD 506
Score = 48 (22.0 bits), Expect = 2.1e-06, Sum P(4) = 2.1e-06
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 1220 TANEQIKDPKEEESLIAKRNLSGKVQAMKKNNVQ 1253
T+N K+ K+E SL R L GK +++ Q
Sbjct: 540 TSNSPSKESKKESSLKKSRILLGKTGVIREEPQQ 573
Score = 38 (18.4 bits), Expect = 1.9e-58, Sum P(4) = 1.9e-58
Identities = 6/11 (54%), Positives = 8/11 (72%)
Query: 536 WLDNIIWEPVD 546
W D+IIW+ D
Sbjct: 429 WEDSIIWDGED 439
>UNIPROTKB|E2QSZ4 [details] [associations]
symbol:TAF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA] [GO:0005669 "transcription
factor TFIID complex" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR011177 Pfam:PF00439
PIRSF:PIRSF003047 PRINTS:PR00503 PROSITE:PS50014 SMART:SM00297
GO:GO:0006355 GO:GO:0003677 GO:GO:0006352 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0005669
InterPro:IPR022591 Pfam:PF12157 Gene3D:1.10.1100.10
InterPro:IPR009067 Pfam:PF09247 SUPFAM:SSF47055
Ensembl:ENSCAFT00000027104 Uniprot:E2QSZ4
Length = 1872
Score = 448 (162.8 bits), Expect = 2.2e-66, Sum P(5) = 2.2e-66
Identities = 122/362 (33%), Positives = 181/362 (50%)
Query: 621 PNSLIHLIRTKIHLLPRAQKLPGENKSLRPPGAF--KKKSDLSVKDGHVFLMEYCEERPL 678
P+S+ L++ H+ +A+ E ++ F + DL+ KDG + L EY EE
Sbjct: 633 PHSVQPLLK---HIKKKAKMREQERQASGGGEMFFMRTPQDLTGKDGDLILAEYSEENGP 689
Query: 679 LLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLTLEPGDKSPFLGDIKAGCSQS 738
L+ GM + YY K PG GA C G + SPFLG + G
Sbjct: 690 LMMQVGMATKIKNYY-KRKPGKDPGAPDCK----YGETVYCHT---SPFLGSLHPGQLLQ 741
Query: 739 SLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRRIDKVAVVAQQEPLMEVMSPGSKNLQ 798
+ E N++RAP++ HK+ TDFL++R+ +G IR + + VV QQ PL EV P SK
Sbjct: 742 AFENNLFRAPIYLHKMPETDFLIIRTRQGYY-IRELVDIFVVGQQCPLFEVPGPNSKRAN 800
Query: 799 TYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLSEAIIRKKLKECAFLRRDGNG 858
T+ + + V +YR F + R I ++++ FP+ SE+ IRK+LK CA +R G
Sbjct: 801 THIRDFLQVFIYRLFWKSKDRPRR--IRMEDIKKAFPSHSESSIRKRLKLCADFKRTGMD 858
Query: 859 KQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRLKHLGITQLTLPASISSAMSQ 918
W +K F +P+E ++R + PE C+Y SM A RLK G + + A
Sbjct: 859 SNWWVLKSDFRLPTEEEIRAMVSPEQCCAYYSMIAAEQRLKDAGYGEKSFFA-------- 910
Query: 919 LPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSY 978
P+E I+ E++ PWN + F+A LE+TGV DP+G G GFSY
Sbjct: 911 -PEEENEEDFQMKIDDEVRTAPWNTTRAFIAAMKGKC----LLEVTGVADPTGCGEGFSY 965
Query: 979 VR 980
V+
Sbjct: 966 VK 967
Score = 235 (87.8 bits), Expect = 2.2e-66, Sum P(5) = 2.2e-66
Identities = 65/183 (35%), Positives = 95/183 (51%)
Query: 932 IERELQITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRXXXXXXXXXXX 991
I+ E++ PWN + F+A LE+TGV DP+G G GFSYV+
Sbjct: 923 IDDEVRTAPWNTTRAFIAAMKGKC----LLEVTGVADPTGCGEGFSYVKIPNKPTQQKDD 978
Query: 992 XXXXXXXNRGGSTVTGTDADLRRLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSS 1051
TVTGTDADLRRLS++ A+++L KF VPEE I K +RW I ++R +S+
Sbjct: 979 KEPQPVKK----TVTGTDADLRRLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMST 1034
Query: 1052 EQAASG---------------VQLQQQTRGKCQEIWDRQVQSLSAADDDEIGSDSEHSDL 1096
EQA SG + Q++ + +CQ I+D Q + LS+ + +DS ++
Sbjct: 1035 EQARSGEGPMSKFARGSRFSVAEHQERYKEECQRIFDLQNKVLSSTEILSTDTDSSSAED 1094
Query: 1097 DSF 1099
F
Sbjct: 1095 SDF 1097
Score = 93 (37.8 bits), Expect = 2.2e-66, Sum P(5) = 2.2e-66
Identities = 36/103 (34%), Positives = 55/103 (53%)
Query: 26 SGGN--RLLGFMFGNVDYAGDLDVD-YLDEDAKEHLAAV-ADKLGPSLTDIDVWNSQSCF 81
+GG L GF+FGN++ AG L+ + LD++ K+HLA + A LG +T++ N +
Sbjct: 31 AGGGPFSLTGFLFGNINGAGQLEGESVLDDECKKHLAGLGALGLGSLITELTA-NEE--- 86
Query: 82 QLFCSYCLLSVNSPQPPVDAVEQDYDKKAEDAVDYEDIDEQYE 124
L + L VN ++ + + EDAVDY DI E E
Sbjct: 87 -LAGTDGAL-VN---------DEGWIRSTEDAVDYSDITEVAE 118
Score = 91 (37.1 bits), Expect = 2.2e-66, Sum P(5) = 2.2e-66
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 521 FSKHSLQNRDMMEGSWLDNIIWEPVDAVGK----PKLILDLQDEQMLFEILDNKDD 572
+S + N +++ G W DNIIW+ A+ + P L LD DE ++ EI D K++
Sbjct: 465 YSIFPIDNEELVYGRWEDNIIWD-AQAMPRLLEPPVLTLDPNDENLILEIPDEKEE 519
Score = 57 (25.1 bits), Expect = 2.2e-66, Sum P(5) = 2.2e-66
Identities = 16/64 (25%), Positives = 28/64 (43%)
Query: 341 GVEQDAATISEHDEQRK---DSCICSEPMKEESNVNPSVGWKSMPSPNFFPLDQHDWEEN 397
GV +D + + RK + I M++ + G + NF + Q WE++
Sbjct: 354 GVPEDGSGFDYGFKLRKMDHEPVIKCRMMEDLRKFEENNGSDLLADENFLMVTQLHWEDD 413
Query: 398 IVWD 401
I+WD
Sbjct: 414 IIWD 417
Score = 56 (24.8 bits), Expect = 1.2e-61, Sum P(4) = 1.2e-61
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 382 PSPNFFPLDQHD-----WEENIVWD 401
P + FP+D + WE+NI+WD
Sbjct: 463 PWYSIFPIDNEELVYGRWEDNIIWD 487
Score = 50 (22.7 bits), Expect = 6.4e-05, Sum P(4) = 6.4e-05
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 1220 TANEQIKDPKEEESLIAKRNLSGKVQAMKKNNVQ 1253
T+N K+ K+E SL R L GK +K+ Q
Sbjct: 521 TSNSPSKENKKESSLKKSRILLGKTGVIKEEPQQ 554
Score = 46 (21.3 bits), Expect = 2.3e-18, Sum P(3) = 2.3e-18
Identities = 22/76 (28%), Positives = 34/76 (44%)
Query: 822 LPCIGV--DELSVQFPNLSEAIIR-KKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRK 878
LP G+ + + P+++E + K FLR G GK V S+ R+ + R+
Sbjct: 209 LPLAGIMQHDATKLLPSVTELFPEFRPGKVLRFLRLFGPGKNVPSVWRSARRKRKKKHRE 268
Query: 879 LAYPEHV----CSYES 890
L E + CS ES
Sbjct: 269 LIQEEQIQEVECSVES 284
Score = 39 (18.8 bits), Expect = 8.7e-61, Sum P(5) = 8.7e-61
Identities = 13/37 (35%), Positives = 16/37 (43%)
Query: 38 NVDYAGDLDVDY-LDEDAKEHLAAVADKLGPSLTDID 73
N DYA + L +D +A V K S DID
Sbjct: 293 NYDYAPPPPPEQCLSDDEITMMAPVESKFSQSTGDID 329
Score = 39 (18.8 bits), Expect = 6.8e-60, Sum P(4) = 6.8e-60
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 536 WLDNIIWEPVDAVGK 550
W D+IIW+ D K
Sbjct: 410 WEDDIIWDGEDVKHK 424
>UNIPROTKB|J9NZ21 [details] [associations]
symbol:TAF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA] [GO:0005669 "transcription
factor TFIID complex" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR011177 Pfam:PF00439
PIRSF:PIRSF003047 PRINTS:PR00503 PROSITE:PS50014 SMART:SM00297
GO:GO:0006355 GO:GO:0003677 GO:GO:0006352 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0005669
InterPro:IPR022591 Pfam:PF12157 Gene3D:1.10.1100.10
InterPro:IPR009067 Pfam:PF09247 SUPFAM:SSF47055
GeneTree:ENSGT00390000012659 OMA:DEFYYPK EMBL:AAEX03026487
Ensembl:ENSCAFT00000043925 Uniprot:J9NZ21
Length = 1926
Score = 448 (162.8 bits), Expect = 2.7e-66, Sum P(5) = 2.7e-66
Identities = 122/362 (33%), Positives = 181/362 (50%)
Query: 621 PNSLIHLIRTKIHLLPRAQKLPGENKSLRPPGAF--KKKSDLSVKDGHVFLMEYCEERPL 678
P+S+ L++ H+ +A+ E ++ F + DL+ KDG + L EY EE
Sbjct: 654 PHSVQPLLK---HIKKKAKMREQERQASGGGEMFFMRTPQDLTGKDGDLILAEYSEENGP 710
Query: 679 LLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLTLEPGDKSPFLGDIKAGCSQS 738
L+ GM + YY K PG GA C G + SPFLG + G
Sbjct: 711 LMMQVGMATKIKNYY-KRKPGKDPGAPDCK----YGETVYCHT---SPFLGSLHPGQLLQ 762
Query: 739 SLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRRIDKVAVVAQQEPLMEVMSPGSKNLQ 798
+ E N++RAP++ HK+ TDFL++R+ +G IR + + VV QQ PL EV P SK
Sbjct: 763 AFENNLFRAPIYLHKMPETDFLIIRTRQGYY-IRELVDIFVVGQQCPLFEVPGPNSKRAN 821
Query: 799 TYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLSEAIIRKKLKECAFLRRDGNG 858
T+ + + V +YR F + R I ++++ FP+ SE+ IRK+LK CA +R G
Sbjct: 822 THIRDFLQVFIYRLFWKSKDRPRR--IRMEDIKKAFPSHSESSIRKRLKLCADFKRTGMD 879
Query: 859 KQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRLKHLGITQLTLPASISSAMSQ 918
W +K F +P+E ++R + PE C+Y SM A RLK G + + A
Sbjct: 880 SNWWVLKSDFRLPTEEEIRAMVSPEQCCAYYSMIAAEQRLKDAGYGEKSFFA-------- 931
Query: 919 LPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSY 978
P+E I+ E++ PWN + F+A LE+TGV DP+G G GFSY
Sbjct: 932 -PEEENEEDFQMKIDDEVRTAPWNTTRAFIAAMKGKC----LLEVTGVADPTGCGEGFSY 986
Query: 979 VR 980
V+
Sbjct: 987 VK 988
Score = 235 (87.8 bits), Expect = 2.7e-66, Sum P(5) = 2.7e-66
Identities = 65/183 (35%), Positives = 95/183 (51%)
Query: 932 IERELQITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRXXXXXXXXXXX 991
I+ E++ PWN + F+A LE+TGV DP+G G GFSYV+
Sbjct: 944 IDDEVRTAPWNTTRAFIAAMKGKC----LLEVTGVADPTGCGEGFSYVKIPNKPTQQKDD 999
Query: 992 XXXXXXXNRGGSTVTGTDADLRRLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSS 1051
TVTGTDADLRRLS++ A+++L KF VPEE I K +RW I ++R +S+
Sbjct: 1000 KEPQPVKK----TVTGTDADLRRLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMST 1055
Query: 1052 EQAASG---------------VQLQQQTRGKCQEIWDRQVQSLSAADDDEIGSDSEHSDL 1096
EQA SG + Q++ + +CQ I+D Q + LS+ + +DS ++
Sbjct: 1056 EQARSGEGPMSKFARGSRFSVAEHQERYKEECQRIFDLQNKVLSSTEILSTDTDSSSAED 1115
Query: 1097 DSF 1099
F
Sbjct: 1116 SDF 1118
Score = 93 (37.8 bits), Expect = 2.7e-66, Sum P(5) = 2.7e-66
Identities = 36/103 (34%), Positives = 55/103 (53%)
Query: 26 SGGN--RLLGFMFGNVDYAGDLDVD-YLDEDAKEHLAAV-ADKLGPSLTDIDVWNSQSCF 81
+GG L GF+FGN++ AG L+ + LD++ K+HLA + A LG +T++ N +
Sbjct: 31 AGGGPFSLTGFLFGNINGAGQLEGESVLDDECKKHLAGLGALGLGSLITELTA-NEE--- 86
Query: 82 QLFCSYCLLSVNSPQPPVDAVEQDYDKKAEDAVDYEDIDEQYE 124
L + L VN ++ + + EDAVDY DI E E
Sbjct: 87 -LAGTDGAL-VN---------DEGWIRSTEDAVDYSDITEVAE 118
Score = 91 (37.1 bits), Expect = 2.7e-66, Sum P(5) = 2.7e-66
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 521 FSKHSLQNRDMMEGSWLDNIIWEPVDAVGK----PKLILDLQDEQMLFEILDNKDD 572
+S + N +++ G W DNIIW+ A+ + P L LD DE ++ EI D K++
Sbjct: 486 YSIFPIDNEELVYGRWEDNIIWD-AQAMPRLLEPPVLTLDPNDENLILEIPDEKEE 540
Score = 57 (25.1 bits), Expect = 2.7e-66, Sum P(5) = 2.7e-66
Identities = 16/64 (25%), Positives = 28/64 (43%)
Query: 341 GVEQDAATISEHDEQRK---DSCICSEPMKEESNVNPSVGWKSMPSPNFFPLDQHDWEEN 397
GV +D + + RK + I M++ + G + NF + Q WE++
Sbjct: 375 GVPEDGSGFDYGFKLRKMDHEPVIKCRMMEDLRKFEENNGSDLLADENFLMVTQLHWEDD 434
Query: 398 IVWD 401
I+WD
Sbjct: 435 IIWD 438
Score = 56 (24.8 bits), Expect = 1.4e-61, Sum P(4) = 1.4e-61
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 382 PSPNFFPLDQHD-----WEENIVWD 401
P + FP+D + WE+NI+WD
Sbjct: 484 PWYSIFPIDNEELVYGRWEDNIIWD 508
Score = 50 (22.7 bits), Expect = 7.2e-05, Sum P(4) = 7.2e-05
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 1220 TANEQIKDPKEEESLIAKRNLSGKVQAMKKNNVQ 1253
T+N K+ K+E SL R L GK +K+ Q
Sbjct: 542 TSNSPSKENKKESSLKKSRILLGKTGVIKEEPQQ 575
Score = 46 (21.3 bits), Expect = 2.5e-18, Sum P(3) = 2.5e-18
Identities = 22/76 (28%), Positives = 34/76 (44%)
Query: 822 LPCIGV--DELSVQFPNLSEAIIR-KKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRK 878
LP G+ + + P+++E + K FLR G GK V S+ R+ + R+
Sbjct: 230 LPLAGIMQHDATKLLPSVTELFPEFRPGKVLRFLRLFGPGKNVPSVWRSARRKRKKKHRE 289
Query: 879 LAYPEHV----CSYES 890
L E + CS ES
Sbjct: 290 LIQEEQIQEVECSVES 305
Score = 39 (18.8 bits), Expect = 1.1e-60, Sum P(5) = 1.1e-60
Identities = 13/37 (35%), Positives = 16/37 (43%)
Query: 38 NVDYAGDLDVDY-LDEDAKEHLAAVADKLGPSLTDID 73
N DYA + L +D +A V K S DID
Sbjct: 314 NYDYAPPPPPEQCLSDDEITMMAPVESKFSQSTGDID 350
Score = 39 (18.8 bits), Expect = 8.0e-60, Sum P(4) = 8.0e-60
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 536 WLDNIIWEPVDAVGK 550
W D+IIW+ D K
Sbjct: 431 WEDDIIWDGEDVKHK 445
>UNIPROTKB|F6UPV2 [details] [associations]
symbol:TAF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA] [GO:0005669 "transcription
factor TFIID complex" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR011177 Pfam:PF00439
PIRSF:PIRSF003047 PRINTS:PR00503 PROSITE:PS50014 SMART:SM00297
GO:GO:0006355 GO:GO:0003677 GO:GO:0006352 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0005669
InterPro:IPR022591 Pfam:PF12157 Gene3D:1.10.1100.10
InterPro:IPR009067 Pfam:PF09247 SUPFAM:SSF47055
GeneTree:ENSGT00390000012659 Ensembl:ENSCAFT00000027104
EMBL:AAEX03026487 Uniprot:F6UPV2
Length = 1893
Score = 446 (162.1 bits), Expect = 6.5e-66, Sum P(5) = 6.5e-66
Identities = 122/362 (33%), Positives = 180/362 (49%)
Query: 621 PNSLIHLIRTKIHLLPRAQKLPGENKSLRPPGAF--KKKSDLSVKDGHVFLMEYCEERPL 678
P+S+ L++ H+ +A+ E ++ F + DL+ KDG + L EY EE
Sbjct: 654 PHSVQPLLK---HIKKKAKMREQERQASGGGEMFFMRTPQDLTGKDGDLILAEYSEENGP 710
Query: 679 LLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLTLEPGDKSPFLGDIKAGCSQS 738
L+ GM + YY K PG GA C G + SPFLG + G
Sbjct: 711 LMMQVGMATKIKNYY-KRKPGKDPGAPDCK----YGETVYCHT---SPFLGSLHPGQLLQ 762
Query: 739 SLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRRIDKVAVVAQQEPLMEVMSPGSKNLQ 798
+ E N++RAP++ HK+ TDFL++R+ +G IR + + VV QQ PL EV P SK
Sbjct: 763 AFENNLFRAPIYLHKMPETDFLIIRTRQGYY-IRELVDIFVVGQQCPLFEVPGPNSKRAN 821
Query: 799 TYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLSEAIIRKKLKECAFLRRDGNG 858
T+ + + V +YR F + R I ++++ FP+ SE+ IRK+LK CA +R G
Sbjct: 822 THIRDFLQVFIYRLFWKSKDRPRR--IRMEDIKKAFPSHSESSIRKRLKLCADFKRTGMD 879
Query: 859 KQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRLKHLGITQLTLPASISSAMSQ 918
W +K F +P+E ++R + PE C+Y SM A RLK G + + A
Sbjct: 880 SNWWVLKSDFRLPTEEEIRAMVSPEQCCAYYSMIAAEQRLKDAGYGEKSFFA-------- 931
Query: 919 LPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSY 978
P+E I E++ PWN + F+A LE+TGV DP+G G GFSY
Sbjct: 932 -PEEENEEDFQMKIVNEVRTAPWNTTRAFIAAMKGKC----LLEVTGVADPTGCGEGFSY 986
Query: 979 VR 980
V+
Sbjct: 987 VK 988
Score = 233 (87.1 bits), Expect = 6.5e-66, Sum P(5) = 6.5e-66
Identities = 65/183 (35%), Positives = 94/183 (51%)
Query: 932 IERELQITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRXXXXXXXXXXX 991
I E++ PWN + F+A LE+TGV DP+G G GFSYV+
Sbjct: 944 IVNEVRTAPWNTTRAFIAAMKGKC----LLEVTGVADPTGCGEGFSYVKIPNKPTQQKDD 999
Query: 992 XXXXXXXNRGGSTVTGTDADLRRLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSS 1051
TVTGTDADLRRLS++ A+++L KF VPEE I K +RW I ++R +S+
Sbjct: 1000 KEPQPVKK----TVTGTDADLRRLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMST 1055
Query: 1052 EQAASG---------------VQLQQQTRGKCQEIWDRQVQSLSAADDDEIGSDSEHSDL 1096
EQA SG + Q++ + +CQ I+D Q + LS+ + +DS ++
Sbjct: 1056 EQARSGEGPMSKFARGSRFSVAEHQERYKEECQRIFDLQNKVLSSTEILSTDTDSSSAED 1115
Query: 1097 DSF 1099
F
Sbjct: 1116 SDF 1118
Score = 93 (37.8 bits), Expect = 6.5e-66, Sum P(5) = 6.5e-66
Identities = 36/103 (34%), Positives = 55/103 (53%)
Query: 26 SGGN--RLLGFMFGNVDYAGDLDVD-YLDEDAKEHLAAV-ADKLGPSLTDIDVWNSQSCF 81
+GG L GF+FGN++ AG L+ + LD++ K+HLA + A LG +T++ N +
Sbjct: 31 AGGGPFSLTGFLFGNINGAGQLEGESVLDDECKKHLAGLGALGLGSLITELTA-NEE--- 86
Query: 82 QLFCSYCLLSVNSPQPPVDAVEQDYDKKAEDAVDYEDIDEQYE 124
L + L VN ++ + + EDAVDY DI E E
Sbjct: 87 -LAGTDGAL-VN---------DEGWIRSTEDAVDYSDITEVAE 118
Score = 91 (37.1 bits), Expect = 6.5e-66, Sum P(5) = 6.5e-66
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 521 FSKHSLQNRDMMEGSWLDNIIWEPVDAVGK----PKLILDLQDEQMLFEILDNKDD 572
+S + N +++ G W DNIIW+ A+ + P L LD DE ++ EI D K++
Sbjct: 486 YSIFPIDNEELVYGRWEDNIIWD-AQAMPRLLEPPVLTLDPNDENLILEIPDEKEE 540
Score = 57 (25.1 bits), Expect = 6.5e-66, Sum P(5) = 6.5e-66
Identities = 16/64 (25%), Positives = 28/64 (43%)
Query: 341 GVEQDAATISEHDEQRK---DSCICSEPMKEESNVNPSVGWKSMPSPNFFPLDQHDWEEN 397
GV +D + + RK + I M++ + G + NF + Q WE++
Sbjct: 375 GVPEDGSGFDYGFKLRKMDHEPVIKCRMMEDLRKFEENNGSDLLADENFLMVTQLHWEDD 434
Query: 398 IVWD 401
I+WD
Sbjct: 435 IIWD 438
Score = 56 (24.8 bits), Expect = 3.3e-61, Sum P(4) = 3.3e-61
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 382 PSPNFFPLDQHD-----WEENIVWD 401
P + FP+D + WE+NI+WD
Sbjct: 484 PWYSIFPIDNEELVYGRWEDNIIWD 508
Score = 50 (22.7 bits), Expect = 6.7e-05, Sum P(4) = 6.7e-05
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 1220 TANEQIKDPKEEESLIAKRNLSGKVQAMKKNNVQ 1253
T+N K+ K+E SL R L GK +K+ Q
Sbjct: 542 TSNSPSKENKKESSLKKSRILLGKTGVIKEEPQQ 575
Score = 46 (21.3 bits), Expect = 3.9e-18, Sum P(3) = 3.9e-18
Identities = 22/76 (28%), Positives = 34/76 (44%)
Query: 822 LPCIGV--DELSVQFPNLSEAIIR-KKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRK 878
LP G+ + + P+++E + K FLR G GK V S+ R+ + R+
Sbjct: 230 LPLAGIMQHDATKLLPSVTELFPEFRPGKVLRFLRLFGPGKNVPSVWRSARRKRKKKHRE 289
Query: 879 LAYPEHV----CSYES 890
L E + CS ES
Sbjct: 290 LIQEEQIQEVECSVES 305
Score = 39 (18.8 bits), Expect = 2.5e-60, Sum P(5) = 2.5e-60
Identities = 13/37 (35%), Positives = 16/37 (43%)
Query: 38 NVDYAGDLDVDY-LDEDAKEHLAAVADKLGPSLTDID 73
N DYA + L +D +A V K S DID
Sbjct: 314 NYDYAPPPPPEQCLSDDEITMMAPVESKFSQSTGDID 350
Score = 39 (18.8 bits), Expect = 1.9e-59, Sum P(4) = 1.9e-59
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 536 WLDNIIWEPVDAVGK 550
W D+IIW+ D K
Sbjct: 431 WEDDIIWDGEDVKHK 445
>UNIPROTKB|I3LP77 [details] [associations]
symbol:I3LP77 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006352 "DNA-dependent transcription, initiation"
evidence=IEA] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR011177 Pfam:PF00439
PIRSF:PIRSF003047 PRINTS:PR00503 PROSITE:PS50014 SMART:SM00297
GO:GO:0006355 GO:GO:0003677 GO:GO:0006352 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0005669
InterPro:IPR022591 Pfam:PF12157 Gene3D:1.10.1100.10
InterPro:IPR009067 Pfam:PF09247 SUPFAM:SSF47055
GeneTree:ENSGT00390000012659 OMA:DEFYYPK Ensembl:ENSSSCT00000032456
Uniprot:I3LP77
Length = 1549
Score = 448 (162.8 bits), Expect = 4.5e-63, Sum P(5) = 4.5e-63
Identities = 122/362 (33%), Positives = 181/362 (50%)
Query: 621 PNSLIHLIRTKIHLLPRAQKLPGENKSLRPPGAF--KKKSDLSVKDGHVFLMEYCEERPL 678
P+S+ L++ H+ +A+ E ++ F + DL+ KDG + L EY EE
Sbjct: 597 PHSVQPLLK---HIKKKAKMREQERQASGGGEMFFMRTPQDLTGKDGDLILAEYSEENGP 653
Query: 679 LLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLTLEPGDKSPFLGDIKAGCSQS 738
L+ GM + YY K PG GA C G + SPFLG + G
Sbjct: 654 LMMQVGMATKIKNYY-KRKPGKDPGAPDCK----YGETVYCHT---SPFLGSLHPGQLLQ 705
Query: 739 SLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRRIDKVAVVAQQEPLMEVMSPGSKNLQ 798
+ E N++RAP++ HK+ TDFL++R+ +G IR + + VV QQ PL EV P SK
Sbjct: 706 AFENNLFRAPIYLHKMPETDFLIIRTRQGYY-IRELVDIFVVGQQCPLFEVPGPNSKRAN 764
Query: 799 TYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLSEAIIRKKLKECAFLRRDGNG 858
T+ + + V +YR F + R I ++++ FP+ SE+ IRK+LK CA +R G
Sbjct: 765 THIRDFLQVFIYRLFWKSKDRPRR--IRMEDIKKAFPSHSESSIRKRLKLCADFKRTGMD 822
Query: 859 KQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRLKHLGITQLTLPASISSAMSQ 918
W +K F +P+E ++R + PE C+Y SM A RLK G + + A
Sbjct: 823 SNWWVLKSDFRLPTEEEIRAMVSPEQCCAYYSMIAAEQRLKDAGYGEKSFFA-------- 874
Query: 919 LPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSY 978
P+E I+ E++ PWN + F+A LE+TGV DP+G G GFSY
Sbjct: 875 -PEEENEEDFQMKIDDEVRTAPWNTTRAFIAAMKGKC----LLEVTGVADPTGCGEGFSY 929
Query: 979 VR 980
V+
Sbjct: 930 VK 931
Score = 235 (87.8 bits), Expect = 4.5e-63, Sum P(5) = 4.5e-63
Identities = 65/183 (35%), Positives = 95/183 (51%)
Query: 932 IERELQITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRXXXXXXXXXXX 991
I+ E++ PWN + F+A LE+TGV DP+G G GFSYV+
Sbjct: 887 IDDEVRTAPWNTTRAFIAAMKGKC----LLEVTGVADPTGCGEGFSYVKIPNKPTQQKDD 942
Query: 992 XXXXXXXNRGGSTVTGTDADLRRLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSS 1051
TVTGTDADLRRLS++ A+++L KF VPEE I K +RW I ++R +S+
Sbjct: 943 KEPQPVKK----TVTGTDADLRRLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMST 998
Query: 1052 EQAASG---------------VQLQQQTRGKCQEIWDRQVQSLSAADDDEIGSDSEHSDL 1096
EQA SG + Q++ + +CQ I+D Q + LS+ + +DS ++
Sbjct: 999 EQARSGEGPMSKFARGSRFSVAEHQERYKEECQRIFDLQNKVLSSTEVLSTDTDSSSAED 1058
Query: 1097 DSF 1099
F
Sbjct: 1059 SDF 1061
Score = 91 (37.1 bits), Expect = 4.5e-63, Sum P(5) = 4.5e-63
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 521 FSKHSLQNRDMMEGSWLDNIIWEPVDAVGK----PKLILDLQDEQMLFEILDNKDD 572
+S + N +++ G W DNIIW+ A+ + P L LD DE ++ EI D K++
Sbjct: 429 YSIFPIDNEELVYGRWEDNIIWD-AQAMPRLLEPPVLTLDPNDENLILEIPDEKEE 483
Score = 59 (25.8 bits), Expect = 4.5e-63, Sum P(5) = 4.5e-63
Identities = 15/51 (29%), Positives = 24/51 (47%)
Query: 351 EHDEQRKDSCICSEPMKEESNVNPSVGWKSMPSPNFFPLDQHDWEENIVWD 401
EH+ K C E ++ + S G + NF + Q WE++I+WD
Sbjct: 336 EHEPVTK--CRMIEDFRK---LEESSGTDLLADENFLMVTQLHWEDDIIWD 381
Score = 56 (24.8 bits), Expect = 5.2e-58, Sum P(4) = 5.2e-58
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 382 PSPNFFPLDQHD-----WEENIVWD 401
P + FP+D + WE+NI+WD
Sbjct: 427 PWYSIFPIDNEELVYGRWEDNIIWD 451
Score = 53 (23.7 bits), Expect = 4.5e-63, Sum P(5) = 4.5e-63
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 103 EQDYDKKAEDAVDYEDIDEQYE 124
++ + + EDAVDY DI+E E
Sbjct: 47 DEGWIRSTEDAVDYSDINEVAE 68
Score = 39 (18.8 bits), Expect = 1.3e-61, Sum P(5) = 1.3e-61
Identities = 13/37 (35%), Positives = 16/37 (43%)
Query: 38 NVDYAGDLDVDY-LDEDAKEHLAAVADKLGPSLTDID 73
N DYA + L +D +A V K S DID
Sbjct: 257 NYDYAPPPPPEQCLSDDEITMMAPVESKFSQSTGDID 293
Score = 39 (18.8 bits), Expect = 3.1e-56, Sum P(4) = 3.1e-56
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 536 WLDNIIWEPVDAVGK 550
W D+IIW+ D K
Sbjct: 374 WEDDIIWDGEDVKHK 388
>FB|FBgn0010355 [details] [associations]
symbol:Taf1 "TBP-associated factor 1" species:7227
"Drosophila melanogaster" [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0005669 "transcription factor TFIID
complex" evidence=ISS;NAS;IDA;IPI] [GO:0005634 "nucleus"
evidence=NAS;IDA] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IDA]
[GO:0001129 "TBP-class protein binding RNA polymerase II
transcription factor activity involved in preinitiation complex
assembly" evidence=IPI] [GO:0006367 "transcription initiation from
RNA polymerase II promoter" evidence=ISS] [GO:0004672 "protein
kinase activity" evidence=NAS] [GO:0003677 "DNA binding"
evidence=NAS] [GO:0006461 "protein complex assembly" evidence=NAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0051726 "regulation of cell cycle" evidence=NAS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016573 "histone
acetylation" evidence=IDA] [GO:0035174 "histone serine kinase
activity" evidence=IDA] [GO:0000117 "regulation of transcription
involved in G2/M-phase of mitotic cell cycle" evidence=IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0046425 "regulation of
JAK-STAT cascade" evidence=IMP] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR001487 InterPro:IPR001878
InterPro:IPR011177 InterPro:IPR017956 Pfam:PF00439
PIRSF:PIRSF003047 PRINTS:PR00503 PROSITE:PS50011 PROSITE:PS50014
SMART:SM00297 SMART:SM00343 SMART:SM00384 EMBL:AE014297
GO:GO:0005524 GO:GO:0022008 GO:GO:0043565 GO:GO:0008270
GO:GO:0045944 GO:GO:0016573 GO:GO:0035174 EMBL:AE001572
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 eggNOG:COG5076
InterPro:IPR018359 GO:GO:0000117 GO:GO:0046425 GO:GO:0005669
GO:GO:0060261 GO:GO:0001129 KO:K03125 InterPro:IPR022591
Pfam:PF12157 Gene3D:1.10.1100.10 InterPro:IPR009067 Pfam:PF09247
SUPFAM:SSF47055 EMBL:S61883 EMBL:BT004888 PIR:A47371
RefSeq:NP_476956.3 RefSeq:NP_996159.1 RefSeq:NP_996160.1
UniGene:Dm.7380 PDB:1TBA PDBsum:1TBA DisProt:DP00081
ProteinModelPortal:P51123 SMR:P51123 DIP:DIP-228N IntAct:P51123
MINT:MINT-788336 STRING:P51123 PaxDb:P51123
EnsemblMetazoa:FBtr0081685 GeneID:40813 KEGG:dme:Dmel_CG17603
CTD:6872 FlyBase:FBgn0010355 GeneTree:ENSGT00390000012659
InParanoid:P51123 OrthoDB:EOG4HHMH6 PhylomeDB:P51123
EvolutionaryTrace:P51123 GenomeRNAi:40813 NextBio:820715
Bgee:P51123 GermOnline:CG17603 Uniprot:P51123
Length = 2129
Score = 573 (206.8 bits), Expect = 2.7e-55, Sum P(6) = 2.7e-55
Identities = 156/463 (33%), Positives = 241/463 (52%)
Query: 655 KKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLG 714
+ DLS +DG + L E+CEE P L++ GM + + YY++ + D G
Sbjct: 711 RNPEDLSGRDGDIVLAEFCEEHPPLINQVGMCSKIKNYYKRKAEKDSGPQDFVYGEVAFA 770
Query: 715 NVLTLEPGDKSPFLGDIKAG-CSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRR 773
+ SPFLG + G C Q+ +E NMYRAP++ HK+A DFL++R+ + IR
Sbjct: 771 HT--------SPFLGILHPGQCIQA-IENNMYRAPIYPHKMAHNDFLVIRT-RNNYWIRS 820
Query: 774 IDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQ 833
++ + V Q+ PL EV P SK ++ + + V +YR F + R I +D++
Sbjct: 821 VNSIYTVGQECPLYEVPGPNSKRANNFTRDFLQVFIYRLFWKS--RDNPRRIRMDDIKQA 878
Query: 834 FPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQA 893
FP SE+ IRK+LK+CA +R G W +K F +PSE ++R + PE C+Y SM A
Sbjct: 879 FPAHSESSIRKRLKQCADFKRTGMDSNWWVIKPEFRLPSEEEIRAMVSPEQCCAYFSMIA 938
Query: 894 GLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQ 953
RLK G + L A P E A ++ E+++ PWN + ++ Q
Sbjct: 939 AEQRLKDAGYGEKFLFA---------PQEDDDEEAQLKLDDEVKVAPWNTTRAYI----Q 985
Query: 954 DRENIERLEITGVGDPSGRGLGFSYVRXXXXXXXXXXXXXXXXXXNRGGSTVTGTDADLR 1013
L+++G DP+G G GFSYVR ++ +VTGTDADLR
Sbjct: 986 AMRGKCLLQLSGPADPTGCGEGFSYVRVPNKPTQTKEEQE-----SQPKRSVTGTDADLR 1040
Query: 1014 RLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASGVQ-LQQQTRG------ 1066
RL ++ A+E+L +F VPEE I K +RW I ++R LS+E+A +G + + + +RG
Sbjct: 1041 RLPLQRAKELLRQFKVPEEEIKKLSRWEVIDVVRTLSTEKAKAGEEGMDKFSRGNRFSIA 1100
Query: 1067 --------KCQEIWDRQVQSLSAAD----DDEIGSDSEHSDLD 1097
+CQ I+D Q + L++++ D+ S SE SDL+
Sbjct: 1101 EHQERYKEECQRIFDLQNRVLASSEVLSTDEAESSASEESDLE 1143
Score = 83 (34.3 bits), Expect = 2.7e-55, Sum P(6) = 2.7e-55
Identities = 20/70 (28%), Positives = 37/70 (52%)
Query: 505 KENVSIKLCQSDAVKRFSKHSLQNRDMMEGSWLDNIIWEP--VDAVGKPKLI-LDLQDEQ 561
++N K ++ +S ++N +++ W D +IW+ V V KPK++ LD DE
Sbjct: 486 QQNAQAKPAEAPDDTWYSLFPVENEELIYYKWEDEVIWDAQQVSKVPKPKVLTLDPNDEN 545
Query: 562 MLFEILDNKD 571
++ I D+ D
Sbjct: 546 IILGIPDDID 555
Score = 65 (27.9 bits), Expect = 2.7e-55, Sum P(6) = 2.7e-55
Identities = 20/71 (28%), Positives = 31/71 (43%)
Query: 333 DDSELVKFGVEQDAATISEHDEQRKDSCICSEPMKEESNVNPSVGWKSMPSPNFFPLDQH 392
D E +G + AA+ S Q KD P E+ +PS+ F + Q
Sbjct: 366 DSGEGFNYGFKTKAASTSSQP-QLKDERRVKSP--EDDVEDPSIA-----DDAFLMVSQL 417
Query: 393 DWEENIVWDNS 403
WE+++VWD +
Sbjct: 418 HWEDDVVWDGN 428
Score = 52 (23.4 bits), Expect = 9.6e-50, Sum P(5) = 9.6e-50
Identities = 19/77 (24%), Positives = 34/77 (44%)
Query: 374 PSVGWKSM-PSPNFFPLDQHDWEENIVWDNSPAASDNSIESHEIAGADV-ESALMRGIEL 431
P W S+ P N L + WE+ ++WD A + + ++ D + ++ GI
Sbjct: 497 PDDTWYSLFPVENE-ELIYYKWEDEVIWD---AQQVSKVPKPKVLTLDPNDENIILGIPD 552
Query: 432 DTGQNNFHERSTSPNEK 448
D + + +ST P K
Sbjct: 553 DIDPSKIN-KSTGPPPK 568
Score = 47 (21.6 bits), Expect = 2.7e-55, Sum P(6) = 2.7e-55
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 25 VSGGNRLLGFMFGNVDYAGDL 45
+ G L G +FGN+D G L
Sbjct: 14 IGNGLDLTGILFGNIDSEGRL 34
Score = 46 (21.3 bits), Expect = 2.7e-55, Sum P(6) = 2.7e-55
Identities = 9/17 (52%), Positives = 11/17 (64%)
Query: 108 KKAEDAVDYEDIDEQYE 124
K +DA+DY DI E E
Sbjct: 118 KAQDDAIDYSDITELSE 134
Score = 40 (19.1 bits), Expect = 1.4e-49, Sum P(2) = 1.4e-49
Identities = 23/89 (25%), Positives = 39/89 (43%)
Query: 487 LRLESQLDLDNHSHANGIKENVSIKLCQSDAVKRFSKHSLQNRDMMEGSWLDNIIWEPVD 546
+ +ES D S NG+ + I D+ R + + + G+ D + E +
Sbjct: 1 MEMESDNSDDEGSIGNGL-DLTGILFGNIDSEGRLLQDD--DGEGRGGTGFDAELRENIG 57
Query: 547 AVGKPKLILDLQDEQMLFEILDNKDDEHP 575
++ K L LD ML E++D K+ E P
Sbjct: 58 SLSK--LGLD----SMLLEVIDLKEAEPP 80
Score = 39 (18.8 bits), Expect = 2.7e-55, Sum P(6) = 2.7e-55
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 260 ILRFSEIFGIHEP 272
+LRFS +FG +P
Sbjct: 243 VLRFSRLFGPGKP 255
Score = 37 (18.1 bits), Expect = 3.3e-48, Sum P(5) = 3.3e-48
Identities = 5/15 (33%), Positives = 9/15 (60%)
Query: 536 WLDNIIWEPVDAVGK 550
W D+++W+ D K
Sbjct: 419 WEDDVVWDGNDIKAK 433
>UNIPROTKB|F1P5U7 [details] [associations]
symbol:TAF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR001487 InterPro:IPR011177 Pfam:PF00439
PIRSF:PIRSF003047 PRINTS:PR00503 PROSITE:PS50014 SMART:SM00297
GO:GO:0006355 GO:GO:0003677 GO:GO:0006352 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0005669
InterPro:IPR022591 Pfam:PF12157 Gene3D:1.10.1100.10
InterPro:IPR009067 Pfam:PF09247 SUPFAM:SSF47055
GeneTree:ENSGT00390000012659 EMBL:AADN02013226 IPI:IPI00580748
Ensembl:ENSGALT00000008777 ArrayExpress:F1P5U7 Uniprot:F1P5U7
Length = 1816
Score = 441 (160.3 bits), Expect = 6.7e-46, Sum P(5) = 6.7e-46
Identities = 113/322 (35%), Positives = 164/322 (50%)
Query: 659 DLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLT 718
DL+ KDG + L EY EE L+ GM + YY K PG GA C G +
Sbjct: 680 DLTGKDGDLILAEYSEENAPLMMQVGMATKIKNYY-KRKPGKDPGAPDCK----YGETVY 734
Query: 719 LEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRRIDKVA 778
SPFLG + G + E N++RAP++ HK+ TDFL++R+ +G +R + +
Sbjct: 735 CHT---SPFLGSLHPGQLLQAFENNLFRAPIYLHKMPETDFLIIRTRQGYY-VRELVDIF 790
Query: 779 VVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLS 838
VV Q+ PL EV P SK T+ + + V +YR F + R I ++++ FP+ S
Sbjct: 791 VVGQECPLYEVPGPNSKRANTHIRDFLQVFIYRLFWKSRDRPRR--IRMEDIKKAFPSHS 848
Query: 839 EAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRL 898
E+ IRK+LK CA +R G W +K F +P+E ++R + PE C+Y SM A RL
Sbjct: 849 ESSIRKRLKLCADFKRTGMDSNWWVLKPDFRLPTEEEIRAMVSPEQCCAYYSMIAAEQRL 908
Query: 899 KHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENI 958
K G + + A P+E I+ E++ PWN + F+A
Sbjct: 909 KDAGYGEKSFFA---------PEEENEEDFQMKIDDEVRTAPWNTTRAFIAAMKGKC--- 956
Query: 959 ERLEITGVGDPSGRGLGFSYVR 980
LE+TGV DP+G G GFSYV+
Sbjct: 957 -LLEVTGVADPTGCGEGFSYVK 977
Score = 231 (86.4 bits), Expect = 5.1e-24, Sum P(4) = 5.1e-24
Identities = 64/183 (34%), Positives = 94/183 (51%)
Query: 932 IERELQITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRXXXXXXXXXXX 991
I+ E++ PWN + F+A LE+TGV DP+G G GFSYV+
Sbjct: 933 IDDEVRTAPWNTTRAFIAAMKGKC----LLEVTGVADPTGCGEGFSYVKIPNKPTQQKDD 988
Query: 992 XXXXXXXNRGGSTVTGTDADLRRLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSS 1051
TVTGTDADLRRLS++ A+++L KF VPEE I K +RW I ++R +S+
Sbjct: 989 KEPQPVKK----TVTGTDADLRRLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMST 1044
Query: 1052 EQAASG---------------VQLQQQTRGKCQEIWDRQVQSLSAADDDEIGSDSEHSDL 1096
EQA SG + Q++ + +CQ I+D Q + L + + +DS ++
Sbjct: 1045 EQARSGEGPMSKFARGSRFSVAEHQERYKEECQRIFDLQNKVLESTEILSTDTDSSSAED 1104
Query: 1097 DSF 1099
F
Sbjct: 1105 SDF 1107
Score = 110 (43.8 bits), Expect = 6.7e-46, Sum P(5) = 6.7e-46
Identities = 36/99 (36%), Positives = 51/99 (51%)
Query: 31 LLGFMFGNVDYAGDLDVD-YLDEDAKEHLAAV-ADKLGPSLTDIDVWNSQSCFQLFCSYC 88
L GF+FGN++ AG L+ D LD+++K+HLA + A LG +T+I +S
Sbjct: 29 LAGFLFGNINEAGQLEGDSVLDKESKKHLAGLGALGLGNLITEITASEDES--------- 79
Query: 89 LLSVNSPQPPVDAV---EQDYDKKAEDAVDYEDIDEQYE 124
P D E+ + K EDAVDY DI+E E
Sbjct: 80 --------PEADGAHLDEEGWVKSTEDAVDYSDINEVAE 110
Score = 90 (36.7 bits), Expect = 6.7e-46, Sum P(5) = 6.7e-46
Identities = 19/55 (34%), Positives = 32/55 (58%)
Query: 521 FSKHSLQNRDMMEGSWLDNIIWEP--VDA-VGKPKLILDLQDEQMLFEILDNKDD 572
+S + N +++ G W DNIIW+ ++ + P L LD DE ++ EI D K++
Sbjct: 475 YSIFPIDNEELVYGRWEDNIIWDDQAMETYLDPPVLTLDPNDENIILEIPDEKEE 529
Score = 57 (25.1 bits), Expect = 2.1e-42, Sum P(4) = 2.1e-42
Identities = 10/26 (38%), Positives = 16/26 (61%)
Query: 382 PSPNFFPLDQHD-----WEENIVWDN 402
P + FP+D + WE+NI+WD+
Sbjct: 473 PWYSIFPIDNEELVYGRWEDNIIWDD 498
Score = 48 (22.0 bits), Expect = 2.6e-05, Sum P(4) = 2.6e-05
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 1220 TANEQIKDPKEEESLIAKRNLSGKVQAMKKNNVQ 1253
T N K+ K+E SL R L GK +K+ Q
Sbjct: 531 TLNSPSKENKKESSLKKSRILLGKTGVIKEEPQQ 564
Score = 46 (21.3 bits), Expect = 6.7e-46, Sum P(5) = 6.7e-46
Identities = 11/55 (20%), Positives = 24/55 (43%)
Query: 385 NFFPLDQHDWEENIVWDNSPAASDNS-IESHEIAGADVESALMRGIELDTGQNNF 438
+F + Q WE++++W+ + + +AG + S++ R Q F
Sbjct: 411 HFLMVTQLQWEDDVIWNGEDVKHKGTKTQRASLAGW-LPSSMTRNATAYNAQQEF 464
Score = 38 (18.4 bits), Expect = 6.7e-46, Sum P(5) = 6.7e-46
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 1079 LSAADDDEIGSDSE 1092
+S +DD+ GSD E
Sbjct: 1758 MSDGEDDDDGSDEE 1771
>UNIPROTKB|F1P5U8 [details] [associations]
symbol:TAF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005669 "transcription factor TFIID complex"
evidence=IEA] [GO:0006352 "DNA-dependent transcription, initiation"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0045120 "pronucleus" evidence=IEA]
InterPro:IPR001487 InterPro:IPR011177 Pfam:PF00439
PIRSF:PIRSF003047 PRINTS:PR00503 PROSITE:PS50014 SMART:SM00297
GO:GO:0006355 GO:GO:0003677 GO:GO:0006352 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0045120
GO:GO:0005669 InterPro:IPR022591 Pfam:PF12157 Gene3D:1.10.1100.10
InterPro:IPR009067 Pfam:PF09247 SUPFAM:SSF47055
GeneTree:ENSGT00390000012659 OMA:DEFYYPK EMBL:AADN02013226
IPI:IPI00811057 Ensembl:ENSGALT00000008776 ArrayExpress:F1P5U8
Uniprot:F1P5U8
Length = 1851
Score = 441 (160.3 bits), Expect = 7.7e-46, Sum P(5) = 7.7e-46
Identities = 113/322 (35%), Positives = 164/322 (50%)
Query: 659 DLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLT 718
DL+ KDG + L EY EE L+ GM + YY K PG GA C G +
Sbjct: 656 DLTGKDGDLILAEYSEENAPLMMQVGMATKIKNYY-KRKPGKDPGAPDCK----YGETVY 710
Query: 719 LEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRRIDKVA 778
SPFLG + G + E N++RAP++ HK+ TDFL++R+ +G +R + +
Sbjct: 711 CHT---SPFLGSLHPGQLLQAFENNLFRAPIYLHKMPETDFLIIRTRQGYY-VRELVDIF 766
Query: 779 VVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLS 838
VV Q+ PL EV P SK T+ + + V +YR F + R I ++++ FP+ S
Sbjct: 767 VVGQECPLYEVPGPNSKRANTHIRDFLQVFIYRLFWKSRDRPRR--IRMEDIKKAFPSHS 824
Query: 839 EAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRL 898
E+ IRK+LK CA +R G W +K F +P+E ++R + PE C+Y SM A RL
Sbjct: 825 ESSIRKRLKLCADFKRTGMDSNWWVLKPDFRLPTEEEIRAMVSPEQCCAYYSMIAAEQRL 884
Query: 899 KHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENI 958
K G + + A P+E I+ E++ PWN + F+A
Sbjct: 885 KDAGYGEKSFFA---------PEEENEEDFQMKIDDEVRTAPWNTTRAFIAAMKGKC--- 932
Query: 959 ERLEITGVGDPSGRGLGFSYVR 980
LE+TGV DP+G G GFSYV+
Sbjct: 933 -LLEVTGVADPTGCGEGFSYVK 953
Score = 231 (86.4 bits), Expect = 5.6e-24, Sum P(4) = 5.6e-24
Identities = 64/183 (34%), Positives = 94/183 (51%)
Query: 932 IERELQITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRXXXXXXXXXXX 991
I+ E++ PWN + F+A LE+TGV DP+G G GFSYV+
Sbjct: 909 IDDEVRTAPWNTTRAFIAAMKGKC----LLEVTGVADPTGCGEGFSYVKIPNKPTQQKDD 964
Query: 992 XXXXXXXNRGGSTVTGTDADLRRLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSS 1051
TVTGTDADLRRLS++ A+++L KF VPEE I K +RW I ++R +S+
Sbjct: 965 KEPQPVKK----TVTGTDADLRRLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMST 1020
Query: 1052 EQAASG---------------VQLQQQTRGKCQEIWDRQVQSLSAADDDEIGSDSEHSDL 1096
EQA SG + Q++ + +CQ I+D Q + L + + +DS ++
Sbjct: 1021 EQARSGEGPMSKFARGSRFSVAEHQERYKEECQRIFDLQNKVLESTEILSTDTDSSSAED 1080
Query: 1097 DSF 1099
F
Sbjct: 1081 SDF 1083
Score = 110 (43.8 bits), Expect = 7.7e-46, Sum P(5) = 7.7e-46
Identities = 36/99 (36%), Positives = 51/99 (51%)
Query: 31 LLGFMFGNVDYAGDLDVD-YLDEDAKEHLAAV-ADKLGPSLTDIDVWNSQSCFQLFCSYC 88
L GF+FGN++ AG L+ D LD+++K+HLA + A LG +T+I +S
Sbjct: 24 LAGFLFGNINEAGQLEGDSVLDKESKKHLAGLGALGLGNLITEITASEDES--------- 74
Query: 89 LLSVNSPQPPVDAV---EQDYDKKAEDAVDYEDIDEQYE 124
P D E+ + K EDAVDY DI+E E
Sbjct: 75 --------PEADGAHLDEEGWVKSTEDAVDYSDINEVAE 105
Score = 90 (36.7 bits), Expect = 7.7e-46, Sum P(5) = 7.7e-46
Identities = 19/55 (34%), Positives = 32/55 (58%)
Query: 521 FSKHSLQNRDMMEGSWLDNIIWEP--VDA-VGKPKLILDLQDEQMLFEILDNKDD 572
+S + N +++ G W DNIIW+ ++ + P L LD DE ++ EI D K++
Sbjct: 451 YSIFPIDNEELVYGRWEDNIIWDDQAMETYLDPPVLTLDPNDENIILEIPDEKEE 505
Score = 57 (25.1 bits), Expect = 2.4e-42, Sum P(4) = 2.4e-42
Identities = 10/26 (38%), Positives = 16/26 (61%)
Query: 382 PSPNFFPLDQHD-----WEENIVWDN 402
P + FP+D + WE+NI+WD+
Sbjct: 449 PWYSIFPIDNEELVYGRWEDNIIWDD 474
Score = 48 (22.0 bits), Expect = 2.8e-05, Sum P(4) = 2.8e-05
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 1220 TANEQIKDPKEEESLIAKRNLSGKVQAMKKNNVQ 1253
T N K+ K+E SL R L GK +K+ Q
Sbjct: 507 TLNSPSKENKKESSLKKSRILLGKTGVIKEEPQQ 540
Score = 46 (21.3 bits), Expect = 7.7e-46, Sum P(5) = 7.7e-46
Identities = 11/55 (20%), Positives = 24/55 (43%)
Query: 385 NFFPLDQHDWEENIVWDNSPAASDNS-IESHEIAGADVESALMRGIELDTGQNNF 438
+F + Q WE++++W+ + + +AG + S++ R Q F
Sbjct: 387 HFLMVTQLQWEDDVIWNGEDVKHKGTKTQRASLAGW-LPSSMTRNATAYNAQQEF 440
Score = 38 (18.4 bits), Expect = 7.7e-46, Sum P(5) = 7.7e-46
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 1079 LSAADDDEIGSDSE 1092
+S +DD+ GSD E
Sbjct: 1701 MSDGEDDDDGSDEE 1714
>WB|WBGene00006382 [details] [associations]
symbol:taf-1 species:6239 "Caenorhabditis elegans"
[GO:0005669 "transcription factor TFIID complex" evidence=IEA;ISS]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0010171 "body morphogenesis" evidence=IMP] [GO:0009790 "embryo
development" evidence=IMP] [GO:0001703 "gastrulation with mouth
forming first" evidence=IMP] [GO:0040002 "collagen and
cuticulin-based cuticle development" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IGI;IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0001071 "nucleic acid
binding transcription factor activity" evidence=IMP] [GO:0004402
"histone acetyltransferase activity" evidence=ISS] [GO:0004674
"protein serine/threonine kinase activity" evidence=ISS]
[GO:0003690 "double-stranded DNA binding" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS]
InterPro:IPR001487 InterPro:IPR001878 InterPro:IPR011177
Pfam:PF00439 PIRSF:PIRSF003047 PRINTS:PR00503 PROSITE:PS50014
SMART:SM00297 SMART:SM00343 GO:GO:0009792 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0004674
GO:GO:0008270 GO:GO:0045944 GO:GO:0010171 GO:GO:0040011
GO:GO:0006352 GO:GO:0040035 GO:GO:0003690 GO:GO:0004842
GO:GO:0040002 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0004402 GO:GO:0001071 GO:GO:0001703
GO:GO:0005669 EMBL:AL132902 KO:K03125 InterPro:IPR022591
Pfam:PF12157 GeneTree:ENSGT00390000012659 OMA:DEFYYPK EMBL:Z82069
RefSeq:NP_493426.2 ProteinModelPortal:G5EGM3 SMR:G5EGM3
IntAct:G5EGM3 EnsemblMetazoa:W04A8.7 GeneID:173257
KEGG:cel:CELE_W04A8.7 CTD:173257 WormBase:W04A8.7 NextBio:878901
Uniprot:G5EGM3
Length = 1744
Score = 351 (128.6 bits), Expect = 2.2e-44, Sum P(6) = 2.2e-44
Identities = 95/291 (32%), Positives = 146/291 (50%)
Query: 659 DLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLT 718
DLS KD + ++EY EE P++LS GM + + Y+++ D G
Sbjct: 594 DLSGKDETLVMIEYSEEHPVILSQPGMASKMKNYFKRRQANDSEPTFT------FGE--- 644
Query: 719 LEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRRIDKVA 778
L + PFLG ++ G S S+E +YRAP++ HK TDFLL+RS + IR + +
Sbjct: 645 LAFSHQIPFLGQLQPGQSLQSIENMLYRAPIYLHKRQNTDFLLIRSMN-QWYIRPLPSIF 703
Query: 779 VVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLS 838
V QQ PL EV SP SK + + + +YR F A+ + +D++ FP+ +
Sbjct: 704 VAGQQCPLYEVPSPNSKRATVFVRDFLFAFIYRLFWASDSSPRR--LKMDDVRNAFPHYA 761
Query: 839 EAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRL 898
E+ IRK+LK C+ R G+ + WS+K F +PS+ ++ + PE C+ SM A RL
Sbjct: 762 ESNIRKRLKMCSTFVRQGS-ETYWSLKPDFRLPSKEEVLSMVTPEMCCAQYSMMAAEQRL 820
Query: 899 KHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVA 949
K G + + S+ DE IE E++ PWN + F+A
Sbjct: 821 KDAGYGEKYFFTPENDEGSE--DEVT-------IEDEIKCAPWNTTRAFLA 862
Score = 177 (67.4 bits), Expect = 2.2e-44, Sum P(6) = 2.2e-44
Identities = 46/123 (37%), Positives = 65/123 (52%)
Query: 932 IERELQITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRXXXXXXXXXXX 991
IE E++ PWN + F+A RE L+ TG+ DP+G G GFSYVR
Sbjct: 845 IEDEIKCAPWNTTRAFLA---SQREKC-LLDQTGIADPTGCGQGFSYVRVSQKPHKDENA 900
Query: 992 XXXXXXXNRGGSTVTGTDADLRRLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSS 1051
VTGT+ADLR+L ++ A+++ + V EE I+ TRW I +IR LS+
Sbjct: 901 TPVPK------KLVTGTNADLRKLPLKEAKQICRGYGVKEEEISALTRWEIIDVIRTLST 954
Query: 1052 EQA 1054
+ A
Sbjct: 955 QAA 957
Score = 78 (32.5 bits), Expect = 2.2e-44, Sum P(6) = 2.2e-44
Identities = 17/43 (39%), Positives = 27/43 (62%)
Query: 1056 SGVQLQQQTRGKCQEIWDRQVQSLSAADDDEIGSDSEHSDLDS 1098
S +Q++ R CQ I+D+Q Q+L A+ D I +D + +D DS
Sbjct: 982 SSADMQEKYRKHCQRIFDQQNQTL--ANTDPISTDDDSTDADS 1022
Score = 58 (25.5 bits), Expect = 2.2e-44, Sum P(6) = 2.2e-44
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 536 WLDNIIWEPVDAVG---KP-KLILDLQDEQMLFEIL-DNKDDEHPLLH 578
W NIIW+ DA+ +P ++D QD+ +++ + D + DE P H
Sbjct: 395 WETNIIWD-ADAMPSTLEPIDFLVDFQDDPLIYGMPEDRRHDEGPDHH 441
Score = 56 (24.8 bits), Expect = 3.6e-44, Sum P(6) = 3.6e-44
Identities = 13/33 (39%), Positives = 17/33 (51%)
Query: 369 ESNVNPSVGWKSMPSPNFFPLDQHDWEENIVWD 401
+S + P+ G PS LD WE NI+WD
Sbjct: 371 DSAILPTPGHSIFPSAPC-DLDILPWETNIIWD 402
Score = 47 (21.6 bits), Expect = 2.2e-44, Sum P(6) = 2.2e-44
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 1224 QIKDPKEEESLIAKRNLSGKVQAMKKN 1250
Q+ + +EE KR L +++ MKKN
Sbjct: 1163 QMDEQYKEEKRKKKRRLQDQIRRMKKN 1189
Score = 47 (21.6 bits), Expect = 2.2e-44, Sum P(6) = 2.2e-44
Identities = 15/48 (31%), Positives = 23/48 (47%)
Query: 1179 QVEGGLSLAKSISGLEIVERLKKANKPAKHIAITVQPNGSHTANEQIK 1226
QVE G K G E K A++ + +A++ TAN+Q+K
Sbjct: 1074 QVEKG---EKKEEGEVTAEEKKSASQFGEDVAMSASKISGITANQQLK 1118
Score = 45 (20.9 bits), Expect = 1.8e-40, Sum P(4) = 1.8e-40
Identities = 18/81 (22%), Positives = 29/81 (35%)
Query: 1051 SEQAASGVQLQQQTRGKCQEIWDRQVQSLSAADDDEIGSDSEHSDLDSFAGDXXXXXXXX 1110
++ AA+ L + E+ D + DDDEI D D ++ D
Sbjct: 1651 NDAAAAQRGLAMDSDDHMDEMEDHPTEEEEEDDDDEIMDDDMDIDATGYSYDHDDNVAVG 1710
Query: 1111 XXXXXXSNYDTKHD-KVEGVK 1130
+ D+ D + E VK
Sbjct: 1711 QIFNDLAMSDSDEDERAEDVK 1731
Score = 39 (18.8 bits), Expect = 1.9e-42, Sum P(6) = 1.9e-42
Identities = 8/37 (21%), Positives = 16/37 (43%)
Query: 117 EDIDEQYEGPEIQIASEEDYLLPKKEYFAAEVSLAAL 153
++ DEQ E Q + + L +Y+ + + L
Sbjct: 470 QEEDEQMESTMAQFTDNDPFNLSNDDYYVPKATSKTL 506
>UNIPROTKB|G5EGM3 [details] [associations]
symbol:taf-1 "Protein TAF-1" species:6239 "Caenorhabditis
elegans" [GO:0016573 "histone acetylation" evidence=ISS]
[GO:0016567 "protein ubiquitination" evidence=ISS]
InterPro:IPR001487 InterPro:IPR001878 InterPro:IPR011177
Pfam:PF00439 PIRSF:PIRSF003047 PRINTS:PR00503 PROSITE:PS50014
SMART:SM00297 SMART:SM00343 GO:GO:0009792 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0004674
GO:GO:0008270 GO:GO:0045944 GO:GO:0010171 GO:GO:0040011
GO:GO:0006352 GO:GO:0040035 GO:GO:0003690 GO:GO:0004842
GO:GO:0040002 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0004402 GO:GO:0001071 GO:GO:0001703
GO:GO:0005669 EMBL:AL132902 KO:K03125 InterPro:IPR022591
Pfam:PF12157 GeneTree:ENSGT00390000012659 OMA:DEFYYPK EMBL:Z82069
RefSeq:NP_493426.2 ProteinModelPortal:G5EGM3 SMR:G5EGM3
IntAct:G5EGM3 EnsemblMetazoa:W04A8.7 GeneID:173257
KEGG:cel:CELE_W04A8.7 CTD:173257 WormBase:W04A8.7 NextBio:878901
Uniprot:G5EGM3
Length = 1744
Score = 351 (128.6 bits), Expect = 2.2e-44, Sum P(6) = 2.2e-44
Identities = 95/291 (32%), Positives = 146/291 (50%)
Query: 659 DLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLT 718
DLS KD + ++EY EE P++LS GM + + Y+++ D G
Sbjct: 594 DLSGKDETLVMIEYSEEHPVILSQPGMASKMKNYFKRRQANDSEPTFT------FGE--- 644
Query: 719 LEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRRIDKVA 778
L + PFLG ++ G S S+E +YRAP++ HK TDFLL+RS + IR + +
Sbjct: 645 LAFSHQIPFLGQLQPGQSLQSIENMLYRAPIYLHKRQNTDFLLIRSMN-QWYIRPLPSIF 703
Query: 779 VVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLS 838
V QQ PL EV SP SK + + + +YR F A+ + +D++ FP+ +
Sbjct: 704 VAGQQCPLYEVPSPNSKRATVFVRDFLFAFIYRLFWASDSSPRR--LKMDDVRNAFPHYA 761
Query: 839 EAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRL 898
E+ IRK+LK C+ R G+ + WS+K F +PS+ ++ + PE C+ SM A RL
Sbjct: 762 ESNIRKRLKMCSTFVRQGS-ETYWSLKPDFRLPSKEEVLSMVTPEMCCAQYSMMAAEQRL 820
Query: 899 KHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVA 949
K G + + S+ DE IE E++ PWN + F+A
Sbjct: 821 KDAGYGEKYFFTPENDEGSE--DEVT-------IEDEIKCAPWNTTRAFLA 862
Score = 177 (67.4 bits), Expect = 2.2e-44, Sum P(6) = 2.2e-44
Identities = 46/123 (37%), Positives = 65/123 (52%)
Query: 932 IERELQITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRXXXXXXXXXXX 991
IE E++ PWN + F+A RE L+ TG+ DP+G G GFSYVR
Sbjct: 845 IEDEIKCAPWNTTRAFLA---SQREKC-LLDQTGIADPTGCGQGFSYVRVSQKPHKDENA 900
Query: 992 XXXXXXXNRGGSTVTGTDADLRRLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSS 1051
VTGT+ADLR+L ++ A+++ + V EE I+ TRW I +IR LS+
Sbjct: 901 TPVPK------KLVTGTNADLRKLPLKEAKQICRGYGVKEEEISALTRWEIIDVIRTLST 954
Query: 1052 EQA 1054
+ A
Sbjct: 955 QAA 957
Score = 78 (32.5 bits), Expect = 2.2e-44, Sum P(6) = 2.2e-44
Identities = 17/43 (39%), Positives = 27/43 (62%)
Query: 1056 SGVQLQQQTRGKCQEIWDRQVQSLSAADDDEIGSDSEHSDLDS 1098
S +Q++ R CQ I+D+Q Q+L A+ D I +D + +D DS
Sbjct: 982 SSADMQEKYRKHCQRIFDQQNQTL--ANTDPISTDDDSTDADS 1022
Score = 58 (25.5 bits), Expect = 2.2e-44, Sum P(6) = 2.2e-44
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 536 WLDNIIWEPVDAVG---KP-KLILDLQDEQMLFEIL-DNKDDEHPLLH 578
W NIIW+ DA+ +P ++D QD+ +++ + D + DE P H
Sbjct: 395 WETNIIWD-ADAMPSTLEPIDFLVDFQDDPLIYGMPEDRRHDEGPDHH 441
Score = 56 (24.8 bits), Expect = 3.6e-44, Sum P(6) = 3.6e-44
Identities = 13/33 (39%), Positives = 17/33 (51%)
Query: 369 ESNVNPSVGWKSMPSPNFFPLDQHDWEENIVWD 401
+S + P+ G PS LD WE NI+WD
Sbjct: 371 DSAILPTPGHSIFPSAPC-DLDILPWETNIIWD 402
Score = 47 (21.6 bits), Expect = 2.2e-44, Sum P(6) = 2.2e-44
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 1224 QIKDPKEEESLIAKRNLSGKVQAMKKN 1250
Q+ + +EE KR L +++ MKKN
Sbjct: 1163 QMDEQYKEEKRKKKRRLQDQIRRMKKN 1189
Score = 47 (21.6 bits), Expect = 2.2e-44, Sum P(6) = 2.2e-44
Identities = 15/48 (31%), Positives = 23/48 (47%)
Query: 1179 QVEGGLSLAKSISGLEIVERLKKANKPAKHIAITVQPNGSHTANEQIK 1226
QVE G K G E K A++ + +A++ TAN+Q+K
Sbjct: 1074 QVEKG---EKKEEGEVTAEEKKSASQFGEDVAMSASKISGITANQQLK 1118
Score = 45 (20.9 bits), Expect = 1.8e-40, Sum P(4) = 1.8e-40
Identities = 18/81 (22%), Positives = 29/81 (35%)
Query: 1051 SEQAASGVQLQQQTRGKCQEIWDRQVQSLSAADDDEIGSDSEHSDLDSFAGDXXXXXXXX 1110
++ AA+ L + E+ D + DDDEI D D ++ D
Sbjct: 1651 NDAAAAQRGLAMDSDDHMDEMEDHPTEEEEEDDDDEIMDDDMDIDATGYSYDHDDNVAVG 1710
Query: 1111 XXXXXXSNYDTKHD-KVEGVK 1130
+ D+ D + E VK
Sbjct: 1711 QIFNDLAMSDSDEDERAEDVK 1731
Score = 39 (18.8 bits), Expect = 1.9e-42, Sum P(6) = 1.9e-42
Identities = 8/37 (21%), Positives = 16/37 (43%)
Query: 117 EDIDEQYEGPEIQIASEEDYLLPKKEYFAAEVSLAAL 153
++ DEQ E Q + + L +Y+ + + L
Sbjct: 470 QEEDEQMESTMAQFTDNDPFNLSNDDYYVPKATSKTL 506
>POMBASE|SPAC2G11.14 [details] [associations]
symbol:taf111 "transcription factor TFIID complex
subunit Taf111" species:4896 "Schizosaccharomyces pombe"
[GO:0000991 "core RNA polymerase II binding transcription factor
activity" evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005669 "transcription factor TFIID complex" evidence=ISO]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001878 SMART:SM00343
PomBase:SPAC2G11.14 EMBL:CU329670 GO:GO:0006355 GO:GO:0008270
GO:GO:0003676 GO:GO:0006367 GO:GO:0000991 GO:GO:0005669 PIR:T38580
RefSeq:NP_593094.1 IntAct:Q09813 STRING:Q09813
EnsemblFungi:SPAC2G11.14.1 GeneID:2541848 KEGG:spo:SPAC2G11.14
eggNOG:COG5179 HOGENOM:HOG000216192 KO:K03125 OMA:NKMIRAP
OrthoDB:EOG4ZW8KG NextBio:20802936 InterPro:IPR022591 Pfam:PF12157
Uniprot:Q09813
Length = 979
Score = 342 (125.4 bits), Expect = 4.9e-27, Sum P(2) = 4.9e-27
Identities = 94/311 (30%), Positives = 156/311 (50%)
Query: 666 HVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLTLEPGDKS 725
H L+E+ EE P +LSNAGM + + YY+K + D++ L G + +VL ++ D+S
Sbjct: 463 HAILVEFSEEHPAVLSNAGMASRIVNYYRKKNEQDESRPKLEVGES---HVLDVQ--DRS 517
Query: 726 PF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKG---KISIRRIDKVAVV 780
PF G ++ G +L M RAP+F H+V TDF+L+R++ K ++ I+ + V
Sbjct: 518 PFWNFGSVEPGEITPTLYNKMIRAPLFKHEVPPTDFILIRNSSSYGSKYYLKNINHMFVS 577
Query: 781 AQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLSEA 840
Q P+ +V P S+ + T S NR+ + V+R + GL + +LS F + +E
Sbjct: 578 GQTFPVTDVPGPHSRKVTTASKNRLKMLVFRLIRRSPNGGLF----IRQLSKHFSDQNEM 633
Query: 841 IIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRLKH 900
IR++LKE ++ G+G W +K +P E R + PE VC ESMQ G+ +L+
Sbjct: 634 QIRQRLKEFMEYKKKGDGPGYWKLKSNEVVPDEAGTRSMVSPETVCLLESMQVGVRQLED 693
Query: 901 LGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENIER 960
G M ++ D+ A + + PW + NF+ T Q + +
Sbjct: 694 AGY---------GKTMDEINDDEDEEQPAEQL-----LAPWITTRNFINAT-QGKAMLTL 738
Query: 961 L---EITGVGD 968
+ TG+G+
Sbjct: 739 FGEGDPTGIGE 749
Score = 53 (23.7 bits), Expect = 4.9e-27, Sum P(2) = 4.9e-27
Identities = 14/45 (31%), Positives = 23/45 (51%)
Query: 392 HDWEENIVWDNSPAASDNSIESH-EIAGADVESALMRGI-ELDTG 434
+DWE+NI++D S N + + D++ A I + DTG
Sbjct: 275 NDWEKNIIYDESDVNKTNQSSFFIDKSLVDIDFAFDENIFDGDTG 319
>ASPGD|ASPL0000011251 [details] [associations]
symbol:AN3907 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR001878 SMART:SM00343 GO:GO:0008270 GO:GO:0003676
EMBL:BN001302 EMBL:AACD01000064 eggNOG:COG5179 HOGENOM:HOG000216192
KO:K03125 OrthoDB:EOG4ZW8KG InterPro:IPR022591 Pfam:PF12157
RefSeq:XP_661511.1 STRING:Q5B6C3 EnsemblFungi:CADANIAT00004791
GeneID:2873329 KEGG:ani:AN3907.2 OMA:RKCANCG Uniprot:Q5B6C3
Length = 1092
Score = 311 (114.5 bits), Expect = 6.3e-26, Sum P(5) = 6.3e-26
Identities = 84/256 (32%), Positives = 125/256 (48%)
Query: 654 FKKKSDLSVKDG-HVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNC 712
+ LS+ D HV L+EY EE PL LSN GM + YY+K + D
Sbjct: 534 YDSTKSLSMADNSHVLLVEYSEESPLTLSNFGMANRIINYYRKKNAEDPTRP-----KAE 588
Query: 713 LGNVLTLEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGK-- 768
+G L P DKSPF G + G ++ MYRAP+F+H+ +TDFL++R++ G
Sbjct: 589 IGETAVLLPQDKSPFSIFGHVDPGEVTPAISNAMYRAPLFSHQPKSTDFLVIRNSTGSGG 648
Query: 769 --ISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIG 826
IR ID + V QQ P +++ P S+ + T + NRM + VYR + L
Sbjct: 649 SDYYIRNIDNIFVAGQQFPSVDIPGPHSRKVTTVAKNRMKMLVYRLLKKSPDLRL----S 704
Query: 827 VDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVC 886
+ +++ P S+ R+K+K+ FL+ D + K W +P + +R PE VC
Sbjct: 705 ISDVTAHIPGTSDMQNRQKVKD--FLQHDKDTKY-WVPLEP--VPEQDVIRSWVQPEDVC 759
Query: 887 SYESMQAGLYRLKHLG 902
E+MQ G L G
Sbjct: 760 LLEAMQVGQQHLHDTG 775
Score = 107 (42.7 bits), Expect = 0.00013, Sum P(5) = 0.00013
Identities = 35/111 (31%), Positives = 51/111 (45%)
Query: 870 IPSEGDLRKLAYPEHVCSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAA 929
+P + +R PE VC E+MQ G +HL T A DE +
Sbjct: 743 VPEQDVIRSWVQPEDVCLLEAMQVGQ---QHLHDTGYGNDAETGGDDDN--DEE----SE 793
Query: 930 SHIERELQITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVR 980
S E Q+ PW S NF+ + + L++ G GDP+GRG GFS+++
Sbjct: 794 SF---EQQMAPWKASRNFLLAS----QGKAMLKLHGEGDPTGRGEGFSFIK 837
Score = 63 (27.2 bits), Expect = 6.3e-26, Sum P(5) = 6.3e-26
Identities = 14/25 (56%), Positives = 18/25 (72%)
Query: 103 EQDYDKKAEDAVDYEDIDEQYEGPE 127
E + +KA+DAVDYED D+ E PE
Sbjct: 42 ELEPGEKADDAVDYEDFDDD-ELPE 65
Score = 55 (24.4 bits), Expect = 6.3e-26, Sum P(5) = 6.3e-26
Identities = 26/111 (23%), Positives = 45/111 (40%)
Query: 387 FPLDQHDWEENIVWDNSPAASDNSIESHEIAGADVESALMRGIELDTGQNNFHERSTSPN 446
F D+ EE I N+ A ++N +E+ E + + AL G D + + +P+
Sbjct: 58 FDDDELPEEEEITQHNARAVAENGLEAPETS----DDALFGGGGDDLFEAPGKDEQAAPD 113
Query: 447 EKDCIVN-MQNSPVLSETFGSKSSSDNTSHLFTESRYHPQLLRLESQLDLD 496
E D + +SP +D T LF E P ++ + +D
Sbjct: 114 ELDDLFGEAPSSP-------RPDLADETRDLFFEEEERPTAVQRPQAIQMD 157
Score = 54 (24.1 bits), Expect = 6.3e-26, Sum P(5) = 6.3e-26
Identities = 13/38 (34%), Positives = 17/38 (44%)
Query: 1061 QQQTRGKCQEIWDRQVQSLSAA---DDDEIGSDSEHSD 1095
Q+ + IWD Q SLS+ DDE+ E D
Sbjct: 874 QKSYETSIRRIWDAQKASLSSTIEHSDDEVNMSEEEED 911
Score = 39 (18.8 bits), Expect = 6.3e-26, Sum P(5) = 6.3e-26
Identities = 18/52 (34%), Positives = 24/52 (46%)
Query: 520 RFSKHSLQNRDMMEGSWLDNI----IWEPVDAVGK--PKLILDLQDEQMLFE 565
R +K RD ME L +I + +P A K K+ LDL D ML +
Sbjct: 360 RPAKKRKLGRDPMEIVSLSHIDLPLLDDPEQASSKVAQKVTLDLNDPYMLLD 411
Score = 37 (18.1 bits), Expect = 6.3e-22, Sum P(4) = 6.3e-22
Identities = 8/28 (28%), Positives = 15/28 (53%)
Query: 99 VDAVEQDYDKKAEDAVDYEDIDEQYEGP 126
V E +++ E+A D D+D + + P
Sbjct: 286 VPVAETSQEEEEEEARDEFDLDYESDEP 313
>SGD|S000003506 [details] [associations]
symbol:TAF1 "TFIID subunit (145 kDa)" species:4932
"Saccharomyces cerevisiae" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0051123 "RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IMP] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IDA;IMP] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IC]
[GO:0004402 "histone acetyltransferase activity" evidence=IEA;IDA]
[GO:0016746 "transferase activity, transferring acyl groups"
evidence=IEA] [GO:0032947 "protein complex scaffold"
evidence=IMP;IDA] [GO:0017025 "TBP-class protein binding"
evidence=IDA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0016573 "histone acetylation" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IDA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001878
SMART:SM00343 SGD:S000003506 GO:GO:0006355 EMBL:BK006941
GO:GO:0008270 GO:GO:0003682 GO:GO:0003676 GO:GO:0032947
GO:GO:0004402 GO:GO:0017025 GO:GO:0005669 EMBL:X84098 GO:GO:0051123
eggNOG:COG5179 HOGENOM:HOG000216192 KO:K03125 OrthoDB:EOG4ZW8KG
InterPro:IPR022591 Pfam:PF12157 GeneTree:ENSGT00390000012659
EMBL:U14954 EMBL:Z73059 PIR:S50237 RefSeq:NP_011790.1
ProteinModelPortal:P46677 DIP:DIP-839N IntAct:P46677
MINT:MINT-617790 STRING:P46677 PaxDb:P46677 PeptideAtlas:P46677
PRIDE:P46677 EnsemblFungi:YGR274C GeneID:853191 KEGG:sce:YGR274C
CYGD:YGR274c OMA:NTTRRCA NextBio:973344 Genevestigator:P46677
GermOnline:YGR274C Uniprot:P46677
Length = 1066
Score = 300 (110.7 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
Identities = 89/292 (30%), Positives = 143/292 (48%)
Query: 611 HKSLADQNVRPNSLIHLIRTKIHLLPRAQKLPGENKSLRPPGAFKKKSDLSVKD-GHVFL 669
H+ ++RP + I + K R +K + K ++ +F DL++ D V+L
Sbjct: 494 HRENFGSHIRPGTKIVFSKLKA----RKRKRD-KGKDVKE--SFSTSQDLTIGDTAPVYL 546
Query: 670 MEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLTLEPGDKSPF-- 727
MEY E+ P+ LS GM L YY+K++ D L G +VL ++ DKSPF
Sbjct: 547 MEYSEQTPVALSKFGMANKLINYYRKANEQDTLRPKLPVGET---HVLGVQ--DKSPFWN 601
Query: 728 LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKIS----IRRIDKVAVVAQQ 783
G ++ G +L NM RAPVF H ++ TDFLL +S+ IS +R I+ + V Q
Sbjct: 602 FGFVEPGHIVPTLYNNMIRAPVFKHDISGTDFLLTKSSGFGISNRFYLRNINHLFTVGQT 661
Query: 784 EPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLSEAIIR 843
P+ E+ P S+ + + R+ + +YR + + I +D ++ FP+ R
Sbjct: 662 FPVEEIPGPNSRKVTSMKATRLKMIIYRILNHNHSKA----ISIDPIAKHFPDQDYGQNR 717
Query: 844 KKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGL 895
+K+KE +RDG K +W +K + ++ L PE + ESM GL
Sbjct: 718 QKVKEFMKYQRDGPEKGLWRLKDDEKLLDNEAVKSLITPEQISQVESMSQGL 769
Score = 55 (24.4 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 101 AVEQDYDKKAEDAVDYEDIDEQYEGPEIQIASEED 135
A +DY + DAVD+ED DE + + + E D
Sbjct: 42 ANSKDYTEHLPDAVDFEDEDELADDDD-DLPEESD 75
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.314 0.132 0.383 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1282 1176 0.00095 123 3 11 23 0.45 34
38 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 23
No. of states in DFA: 633 (67 KB)
Total size of DFA: 543 KB (2247 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 106.54u 0.07s 106.61t Elapsed: 00:00:09
Total cpu time: 106.55u 0.07s 106.62t Elapsed: 00:00:09
Start: Tue May 21 10:12:59 2013 End: Tue May 21 10:13:08 2013