BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 000792
(1282 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|302143274|emb|CBI21835.3| unnamed protein product [Vitis vinifera]
Length = 1798
Score = 1332 bits (3448), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 764/1286 (59%), Positives = 905/1286 (70%), Gaps = 90/1286 (6%)
Query: 35 MFGNVDYAGDLDVDYLDEDAKEHLAAVADKLGPSLTDIDVWNSQSCFQLFCSYCLLSVNS 94
MFGNVD AGDLD +Y+ +DAKEHLAA+ADKLGPSLTDID LSV S
Sbjct: 1 MFGNVDGAGDLDYNYVFQDAKEHLAALADKLGPSLTDID----------------LSVKS 44
Query: 95 PQPPVDAVEQDYDKKAEDAVDYEDIDEQYEGPEIQIASEEDYLLPKKEYFAAEVSLAALK 154
PQ P D EQDYD+KAEDAV+YEDIDEQYEGPEIQ A+EEDYLL KKEYF+A+VS+A+L
Sbjct: 45 PQTPADGAEQDYDEKAEDAVNYEDIDEQYEGPEIQAATEEDYLLSKKEYFSADVSVASLD 104
Query: 155 PTASPFDDENYDEDEELEKEHEEVDKETEDTTTILSGEQVECATAVPDGEKSPEGDPQVG 214
+AS FDD+NYDEDEE EKEHE VD +E I SGEQ E + V +GEKSP+ D G
Sbjct: 105 HSASVFDDDNYDEDEEFEKEHEVVDNNSE-VQAISSGEQGEHLSVVSEGEKSPDDDLFPG 163
Query: 215 SLGAEEEMTAGVKDYDEELADILKGPLDGQVSTPLPVLCVEDGKVILRFSEIFGIHEPLK 274
L E +T ++D EE + L+ P +G+ S PLP+LCVEDG VILRFSEIFGIH PLK
Sbjct: 164 LL-EPENLTGDLEDIPEEEPEGLEEPFEGKRSAPLPILCVEDGMVILRFSEIFGIHGPLK 222
Query: 275 KGKKRDQRYSTPKDKYNTMDVSSLVEEDEEVYLKGSGQGFPLFKEANIFQHGIFSLNDDD 334
KG+KRD+RY+ PK++Y +MD VEEDEE +LKG Q F K + Q +D+
Sbjct: 223 KGEKRDRRYTIPKERYKSMDAPDNVEEDEEAFLKGGCQAFSFTKHKLLTQDDASVFMEDE 282
Query: 335 SELVKFGVEQDAATIS-EHDEQRKDSCICSEPMKEESNVNPSVGWKSMPSPNFFPLDQHD 393
+EL K GV Q AT+ ++DEQRK SCI +EPMKE+ V+ S W S SP F+PLDQ D
Sbjct: 283 AELKKVGVVQGTATMELQNDEQRKHSCISAEPMKEDMPVDLSEFWLSPLSPKFYPLDQQD 342
Query: 394 WEENIVWDNSPAASDNSIESHEIAGADVESA------------LMRGIELDTGQNNFHER 441
WE+ I+WDNSP SDNS ES EI+G D E+ ++ G +D H+
Sbjct: 343 WEDKIIWDNSPEVSDNSAESCEISGPDSEAIRRFNKLTLQNRDMLEGSWVDRIIWEPHKP 402
Query: 442 STSPNEKDCIVNMQNSPVLSETFGSKSSSDNTSHLFTESRYHPQLLRLESQLDLDNHSHA 501
+ P I+++Q+ +L E K + H P ++L H
Sbjct: 403 ISKPK---LILDLQDEQMLFEILDDKDGKNLGLHAGAMLITRPVKSSTGDSIELPVHGGP 459
Query: 502 NGIKENVS-----IKLCQSDAVKRFSK----------HS------------LQNRDMMEG 534
+G + N++ + S +K SK HS L N+D+
Sbjct: 460 SGGRFNIANDKFYLNRKTSQQLKSHSKKRTAHGVKILHSIPALKLQTMKLKLSNKDIA-N 518
Query: 535 SWLDNIIWEPVDAVGKPKLILDLQDEQMLFEILDNKDDEHPLLHAGA-----MIITRSAK 589
+W P D K L + + IL + + LH A + +++K
Sbjct: 519 FHRPKALWYPHDIEMAVKEQGKLPTQGPMKIILKSLGGKGSKLHVDAEETVSSVKLKASK 578
Query: 590 PSDFKPAESVKLFYLGKELEDHKSLADQNVRPNSLIHLIRTKIHLLPRAQKLPGENKSLR 649
DFKP+E VK+FY GKELEDHKSLA QNV+PNSL+HL+RTKIHL PRAQKLPGENKSLR
Sbjct: 579 KLDFKPSEMVKIFYTGKELEDHKSLAAQNVQPNSLLHLVRTKIHLWPRAQKLPGENKSLR 638
Query: 650 PPGAFKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSG 709
PPGAFKKKSDLSVKDGHVFLMEYCEERPLLL N GMGA LCTYYQKS+PGD GA + +G
Sbjct: 639 PPGAFKKKSDLSVKDGHVFLMEYCEERPLLLGNVGMGARLCTYYQKSAPGDHTGAFMRNG 698
Query: 710 NNCLGNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKI 769
N+ LG VLTL+P DKSPFLGDIK GCSQSSLETNMYRAP+F HKV++TD+LLVRSAKGK+
Sbjct: 699 NSSLGTVLTLDPADKSPFLGDIKPGCSQSSLETNMYRAPLFPHKVSSTDYLLVRSAKGKL 758
Query: 770 SIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDE 829
SIRRID++ VV QQEP MEVMSPG+K LQTY +NR+LV +YREF A KRG LPCI DE
Sbjct: 759 SIRRIDRIDVVGQQEPHMEVMSPGTKGLQTYIMNRLLVYMYREFRAGEKRGSLPCIRADE 818
Query: 830 LSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYE 889
LS QFPN+SE +RK+LK CA L++ NG W M+R F IP E +LR++ PE+VC+YE
Sbjct: 819 LSAQFPNISEPFLRKRLKHCADLQKGSNGLLFWVMRRNFRIPLEEELRRMVTPENVCAYE 878
Query: 890 SMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVA 949
SMQAGLYRLKHLGIT+LTLP +SSAM+QLP EAIALAAASHIERELQITPWNLSSNFVA
Sbjct: 879 SMQAGLYRLKHLGITRLTLPTGLSSAMNQLPYEAIALAAASHIERELQITPWNLSSNFVA 938
Query: 950 CTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTD 1009
CTNQDRENIERLEITGVGDPSGRGLGFSYVR APKA +S+AMVKKK RGGSTVTGTD
Sbjct: 939 CTNQDRENIERLEITGVGDPSGRGLGFSYVRTAPKAPISNAMVKKKITVGRGGSTVTGTD 998
Query: 1010 ADLRRLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASGV----------- 1058
ADLRRLSMEAAREVLLKFNVPEE+IAKQTRWHRIAMIRKLSSEQAASGV
Sbjct: 999 ADLRRLSMEAAREVLLKFNVPEELIAKQTRWHRIAMIRKLSSEQAASGVKVDPTTISKYA 1058
Query: 1059 --------QLQQQTRGKCQEIWDRQVQSLSAADDDEIGSDSE-HSDLDSFAGDLENLLDA 1109
QLQQQTR KCQEIWDRQVQSLSA D DEI SDSE +SDLDSFAGDLENLLDA
Sbjct: 1059 RGQRMSFLQLQQQTREKCQEIWDRQVQSLSAVDSDEIESDSEANSDLDSFAGDLENLLDA 1118
Query: 1110 EEFEE-EESNYDTKHDKVEGVKGLKMRRRPIQVQAEEEIEDEAAEAAELCRLLMDDDEAE 1168
EE E+ EE N ++KHD+ +GV+GLKMRRRP Q QAEEEIEDEAAEAAELCR+LMDDDEAE
Sbjct: 1119 EECEDGEEGNCESKHDRTDGVRGLKMRRRPSQAQAEEEIEDEAAEAAELCRMLMDDDEAE 1178
Query: 1169 LKKKKKKTKAQVEGGLSLAKSIS-GLEIVERLKKANKPAKHIAITVQPNGSHTANEQ-IK 1226
KKKKK E GL+L ++ G E +++KK + K + VQP+GS++ E+ +
Sbjct: 1179 RKKKKKTRPVGEEEGLALGSQLNFGFENGQKMKKNSAVVKQLVSKVQPDGSYSQKEKAFR 1238
Query: 1227 DPKEEESLIAKRNLSGKVQAMKKNNV 1252
D KE ES + KRN+SGK + +KKN+
Sbjct: 1239 DSKEVESFLPKRNISGKAKILKKNDA 1264
>gi|449475476|ref|XP_004154465.1| PREDICTED: LOW QUALITY PROTEIN: transcription initiation factor TFIID
subunit 1-A-like [Cucumis sativus]
Length = 1734
Score = 1037 bits (2682), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 613/1211 (50%), Positives = 786/1211 (64%), Gaps = 84/1211 (6%)
Query: 75 WN-SQSCFQLFCSYCLLSVNSPQPPVDAVEQDYDKKAEDAVDYEDIDEQYEGPEIQIASE 133
WN Q+ + F + LL + P+D YD KAEDAVDYEDIDE+Y+GPEI+ A E
Sbjct: 43 WNLCQATLRHFNFFTLLVLVLRHQPLD-----YDAKAEDAVDYEDIDEEYDGPEIEAAGE 97
Query: 134 EDYLLPKKEYFAAEVSLAALKPTASPFDDENYDEDEELEKEHEEVDKETEDTTTILSGEQ 193
ED+LLP++EYF+AEVSL+ L+PTAS ++ D DE+ E + V+ E S EQ
Sbjct: 98 EDHLLPRREYFSAEVSLSTLEPTASV--FDDEDYDEDFENVPDVVNNSVEPQIIHASDEQ 155
Query: 194 VECATAVPDGEKS--PEGDPQVGSLGAEEEMTAGVKDYDEELADILKGPLDGQVSTPLPV 251
EC V +GEKS E P E +T + E ++ K D + TPLPV
Sbjct: 156 GECLEIVSEGEKSLAVESAPL-----NNEVITGRAESLHEGTPEVQKRLQDDKSHTPLPV 210
Query: 252 LCVEDGKVILRFSEIFGIHEPLKKGKKRDQRYSTPKDKYNTMDVSSLVEEDEEVYLKGSG 311
LC+E+G IL+FSEIFG+H+ LKK +KR RY T KDKY + DVS +VEEDEE +L G
Sbjct: 211 LCMENGMAILQFSEIFGVHDSLKKKEKRASRYYTRKDKYRSADVSDIVEEDEEAFLHGFS 270
Query: 312 QGFPLFKEANIFQHGIFSLNDDDSELVKFGVEQDAATISEH-DEQRKDSCICSEPMKEES 370
+G K A + + DD E KFGV Q ++ D Q+KD C +EPMK+
Sbjct: 271 RGVSYVKPAYDVKDDTTMFDVDDLEYNKFGVVQGVDVMTSRVDWQQKDHCCGAEPMKQVV 330
Query: 371 NVNPSVGWKSMPSPNFFPLDQHDWEENIVWDNSPAASDNSIESHEIAGADVESALMRGIE 430
N +G + F+PLDQ +WEE I+WD+SP +S N++ S++ +G+D+E++ R +E
Sbjct: 331 AENVPIGSNFLLFNTFYPLDQQNWEERILWDDSPVSSKNAVGSYKASGSDIEASPNRDVE 390
Query: 431 LDTG-QNNFHERSTSPNEKDCIVNMQNSPVLSETFGSKSSSDNTSHLFTESRYHPQLLRL 489
Q E N + P+L E FGS+ S + E YHPQ+LRL
Sbjct: 391 PQVSIQIVRSEHHIGLNGDGQSLYHCGFPLL-EPFGSRKISRTEESISPEVIYHPQMLRL 449
Query: 490 ESQLDLDNHSHANGIKENVSIKLCQSDAVKRFSKHSLQNRDMMEGSWLDNIIWEPVDAVG 549
ES D+D+ ++G+KEN+ + QS+AV+ FSK S +NR M+EGSWLD ++WE + +
Sbjct: 450 ESWKDVDDSCQSDGLKENIPDER-QSNAVRSFSKFSPKNRRMLEGSWLDKVLWETDEPIE 508
Query: 550 KPKLILDLQDEQMLFEILDNKDDEHPLLHAGAMIITRSAKPSDFKPAE--------SVKL 601
KPK I DL+DE MLFEI D D ++ H+GAMI+TRS+ + E +
Sbjct: 509 KPKFIFDLEDEHMLFEISDENDSKYIQFHSGAMILTRSSMSVNGNSFELSGSGGQGGWRF 568
Query: 602 FYLGKELEDHKSLADQNVRPNSLIHLIRTKIHLLPRAQKLPGENKSLRPPGAFKKKSDLS 661
K + K A Q ++ NS +S+ F K +
Sbjct: 569 VSNDKHYSNRK--ASQQLKSNS--------------------XKRSVHGIKVFHSKPAMM 606
Query: 662 VKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLTLEP 721
++ + L +YCEERPLLL N GMGA LCTYYQKSSP DQ GALL +G + LG+V+ LEP
Sbjct: 607 LQTMKLKLSKYCEERPLLLGNIGMGARLCTYYQKSSPDDQTGALLRNGGDSLGHVIILEP 666
Query: 722 GDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRRIDKVAVVA 781
DKSP+LG++K G Q+SLETNMYRAPVF+HKV TD++LVRSAKGK+S+RR+D+ V
Sbjct: 667 SDKSPYLGELKGGSVQASLETNMYRAPVFSHKVPMTDYILVRSAKGKLSLRRVDRNFAVG 726
Query: 782 QQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLSEAI 841
QQEPLMEV SPG+K+LQ + +NR+ + ++REF AA KR +P I VDEL QFP LSE +
Sbjct: 727 QQEPLMEVFSPGTKSLQIFMMNRLTLYMFREFLAAEKRRRIPDIRVDELPSQFPYLSETV 786
Query: 842 IRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRLKHL 901
IRKKLKE A +R+ +G+ + KR + + D PE VC YESMQAGLYRLKHL
Sbjct: 787 IRKKLKEYALQQRNSSGQIILIKKRNASLSLKKDA---VTPEDVCKYESMQAGLYRLKHL 843
Query: 902 GITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENIERL 961
G++++ P++ISSAMS+LPDEAI LAAASHIERELQITPWNLSSNFVACT Q +ENIERL
Sbjct: 844 GLSEVH-PSAISSAMSRLPDEAITLAAASHIERELQITPWNLSSNFVACTTQGKENIERL 902
Query: 962 EITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLRRLSMEAAR 1021
EITGVGDPSGRGLGFSYVR+ PKA +S+A +KKKAA++RG S VTGTDADLRRLSM+AA+
Sbjct: 903 EITGVGDPSGRGLGFSYVRSVPKAPISNASLKKKAASSRGSSAVTGTDADLRRLSMDAAK 962
Query: 1022 EVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASGV-------------------QLQQ 1062
EVLLKF+V EE IAK TRWHRIAMIR+LSSEQAASGV QLQ+
Sbjct: 963 EVLLKFDVSEEQIAKLTRWHRIAMIRRLSSEQAASGVQVDPTTISKYARGQRMSFLQLQR 1022
Query: 1063 QTRGKCQEIWDRQVQSLSAADDDEIGSDSE-HSDLDSFAGDLENLLDAEEFEEEESNYDT 1121
QTR KCQEIW+RQ+QSLSA+D E SDSE +SDLDSFAGDLENLLDAEEFE+E ++
Sbjct: 1023 QTREKCQEIWERQIQSLSASDGAENESDSEGNSDLDSFAGDLENLLDAEEFEDEVDTFEI 1082
Query: 1122 KHDKVEGVKGLKMRRRPIQVQAEEEIEDEAAEAAELCRLLMDDDEAELKKKKKKTKAQVE 1181
+H+K +GVKGLKMRRRP VQ EEEIEDE AEAAELCRLLM DDEAE ++KKKK K E
Sbjct: 1083 RHEKTDGVKGLKMRRRPSIVQTEEEIEDEVAEAAELCRLLM-DDEAERRRKKKKNKVMGE 1141
Query: 1182 GGLSLAKSISGLEIVERLKKANKP--AKHIAITVQPNGSHTANEQIKDPKEEESLIAKRN 1239
LS S KP +H+ QP+ ++ + E I++ KE ES+ ++
Sbjct: 1142 AVLSTGFQASFFH--------EKPEQTRHLISIAQPDVTYISKENIREQKEVESISNRKE 1193
Query: 1240 LSGKVQAMKKN 1250
SGK++ MKKN
Sbjct: 1194 KSGKLKPMKKN 1204
>gi|359485367|ref|XP_002273712.2| PREDICTED: transcription initiation factor TFIID subunit 1-A-like
[Vitis vinifera]
Length = 2068
Score = 980 bits (2534), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 502/689 (72%), Positives = 569/689 (82%), Gaps = 23/689 (3%)
Query: 586 RSAKPSDFKPAESVKLFYLGKELEDHKSLADQNVRPNSLIHLIRTKIHLLPRAQKLPGEN 645
+++K DFKP+E VK+FY GKELEDHKSLA QNV+PNSL+HL+RTKIHL PRAQKLPGEN
Sbjct: 845 KASKKLDFKPSEMVKIFYTGKELEDHKSLAAQNVQPNSLLHLVRTKIHLWPRAQKLPGEN 904
Query: 646 KSLRPPGAFKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGAL 705
KSLRPPGAFKKKSDLSVKDGHVFLMEYCEERPLLL N GMGA LCTYYQKS+PGD GA
Sbjct: 905 KSLRPPGAFKKKSDLSVKDGHVFLMEYCEERPLLLGNVGMGARLCTYYQKSAPGDHTGAF 964
Query: 706 LCSGNNCLGNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSA 765
+ +GN+ LG VLTL+P DKSPFLGDIK GCSQSSLETNMYRAP+F HKV++TD+LLVRSA
Sbjct: 965 MRNGNSSLGTVLTLDPADKSPFLGDIKPGCSQSSLETNMYRAPLFPHKVSSTDYLLVRSA 1024
Query: 766 KGKISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCI 825
KGK+SIRRID++ VV QQEP MEVMSPG+K LQTY +NR+LV +YREF A KRG LPCI
Sbjct: 1025 KGKLSIRRIDRIDVVGQQEPHMEVMSPGTKGLQTYIMNRLLVYMYREFRAGEKRGSLPCI 1084
Query: 826 GVDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHV 885
DELS QFPN+SE +RK+LK CA L++ NG W M+R F IP E +LR++ PE+V
Sbjct: 1085 RADELSAQFPNISEPFLRKRLKHCADLQKGSNGLLFWVMRRNFRIPLEEELRRMVTPENV 1144
Query: 886 CSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSS 945
C+YESMQAGLYRLKHLGIT+LTLP +SSAM+QLP EAIALAAASHIERELQITPWNLSS
Sbjct: 1145 CAYESMQAGLYRLKHLGITRLTLPTGLSSAMNQLPYEAIALAAASHIERELQITPWNLSS 1204
Query: 946 NFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTV 1005
NFVACTNQDRENIERLEITGVGDPSGRGLGFSYVR APKA +S+AMVKKK RGGSTV
Sbjct: 1205 NFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRTAPKAPISNAMVKKKITVGRGGSTV 1264
Query: 1006 TGTDADLRRLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASGV------- 1058
TGTDADLRRLSMEAAREVLLKFNVPEE+IAKQTRWHRIAMIRKLSSEQAASGV
Sbjct: 1265 TGTDADLRRLSMEAAREVLLKFNVPEELIAKQTRWHRIAMIRKLSSEQAASGVKVDPTTI 1324
Query: 1059 ------------QLQQQTRGKCQEIWDRQVQSLSAADDDEIGSDSE-HSDLDSFAGDLEN 1105
QLQQQTR KCQEIWDRQVQSLSA D DEI SDSE +SDLDSFAGDLEN
Sbjct: 1325 SKYARGQRMSFLQLQQQTREKCQEIWDRQVQSLSAVDSDEIESDSEANSDLDSFAGDLEN 1384
Query: 1106 LLDAEEFEE-EESNYDTKHDKVEGVKGLKMRRRPIQVQAEEEIEDEAAEAAELCRLLMDD 1164
LLDAEE E+ EE N ++KHD+ +GV+GLKMRRRP Q QAEEEIEDEAAEAAELCR+LMDD
Sbjct: 1385 LLDAEECEDGEEGNCESKHDRTDGVRGLKMRRRPSQAQAEEEIEDEAAEAAELCRMLMDD 1444
Query: 1165 DEAELKKKKKKTKAQVEGGLSLAKSIS-GLEIVERLKKANKPAKHIAITVQPNGSHTANE 1223
DEAE KKKKK E GL+L ++ G E +++KK + K + VQP+GS++ E
Sbjct: 1445 DEAERKKKKKTRPVGEEEGLALGSQLNFGFENGQKMKKNSAVVKQLVSKVQPDGSYSQKE 1504
Query: 1224 Q-IKDPKEEESLIAKRNLSGKVQAMKKNN 1251
+ +D KE ES + KRN+SGK + +KKN+
Sbjct: 1505 KAFRDSKEVESFLPKRNISGKAKILKKND 1533
Score = 375 bits (962), Expect = e-100, Method: Compositional matrix adjust.
Identities = 195/357 (54%), Positives = 250/357 (70%), Gaps = 2/357 (0%)
Query: 237 LKGPLDGQVSTPLPVLCVEDGKVILRFSEIFGIHEPLKKGKKRDQRYSTPKDKYNTMDVS 296
L+ P +G+ S PLP+LCVEDG VILRFSEIFGIH PLKKG+KRD+RY+ PK++Y +MD
Sbjct: 360 LEEPFEGKRSAPLPILCVEDGMVILRFSEIFGIHGPLKKGEKRDRRYTIPKERYKSMDAP 419
Query: 297 SLVEEDEEVYLKGSGQGFPLFKEANIFQHGIFSLNDDDSELVKFGVEQDAATIS-EHDEQ 355
VEEDEE +LKG Q F K + Q +D++EL K GV Q AT+ ++DEQ
Sbjct: 420 DNVEEDEEAFLKGGCQAFSFTKHKLLTQDDASVFMEDEAELKKVGVVQGTATMELQNDEQ 479
Query: 356 RKDSCICSEPMKEESNVNPSVGWKSMPSPNFFPLDQHDWEENIVWDNSPAASDNSIESHE 415
RK SCI +EPMKE+ V+ S W S SP F+PLDQ DWE+ I+WDNSP SDNS ES E
Sbjct: 480 RKHSCISAEPMKEDMPVDLSEFWLSPLSPKFYPLDQQDWEDKIIWDNSPEVSDNSAESCE 539
Query: 416 IAGADVESALMRGIELDT-GQNNFHERSTSPNEKDCIVNMQNSPVLSETFGSKSSSDNTS 474
I+G D E + + EL T QN + + +EKD V + +SPVL E FGS++SS +
Sbjct: 540 ISGPDSEVVVDKETELVTKAQNQRPKFQVAVDEKDHGVFLGSSPVLIEAFGSRNSSALIN 599
Query: 475 HLFTESRYHPQLLRLESQLDLDNHSHANGIKENVSIKLCQSDAVKRFSKHSLQNRDMMEG 534
H +E +YHPQLLRLE++L++DN S + KE+ S+A++RF+K +LQNRDM+EG
Sbjct: 600 HSLSEIKYHPQLLRLETRLEMDNSSQSAVRKEDAIEDPRGSEAIRRFNKLTLQNRDMLEG 659
Query: 535 SWLDNIIWEPVDAVGKPKLILDLQDEQMLFEILDNKDDEHPLLHAGAMIITRSAKPS 591
SW+D IIWEP + KPKLILDLQDEQMLFEILD+KD ++ LHAGAM+ITR K S
Sbjct: 660 SWVDRIIWEPHKPISKPKLILDLQDEQMLFEILDDKDGKNLGLHAGAMLITRPVKSS 716
Score = 200 bits (508), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 146/235 (62%), Positives = 169/235 (71%), Gaps = 24/235 (10%)
Query: 3 GYDSGSASKDGRDEDDEEEYEDVSGGNRLLGFMFGNVDYAGDLDVDYLDE------DAKE 56
GY SGSAS++ RD+DDE+EY++ NRLLGFMFGNVD AGDLDVDYLDE DAKE
Sbjct: 2 GYGSGSASQEDRDDDDEDEYDEGGASNRLLGFMFGNVDGAGDLDVDYLDEYNYVFQDAKE 61
Query: 57 HLAAVADKLGPSLTDIDVWNSQSCFQLFCSYCLLSVNSPQPPVDAVEQDYDKKAEDAVDY 116
HLAA+ADKLGPSLTDID LSV SPQ P D EQDYD+KAEDAV+Y
Sbjct: 62 HLAALADKLGPSLTDID----------------LSVKSPQTPADGAEQDYDEKAEDAVNY 105
Query: 117 EDIDEQYEGPEIQIASEEDYLLPKKEYFAAEVSLAALKPTASPFDDENYDEDEELEKEHE 176
EDIDEQYEGPEIQ A+EEDYLL KKEYF+A+VS+A+L +AS FDD+NYDEDEE EKEHE
Sbjct: 106 EDIDEQYEGPEIQAATEEDYLLSKKEYFSADVSVASLDHSASVFDDDNYDEDEEFEKEHE 165
Query: 177 EVDKETEDTTTILSGEQVECATAVPDGEKSPEGDPQVGSLGAEEEMTAGVKDYDE 231
VD +E I SGEQ E + V +GEKSP+ D G L E +T ++D E
Sbjct: 166 VVDNNSE-VQAISSGEQGEHLSVVSEGEKSPDDDLFPGLL-EPENLTGDLEDIPE 218
>gi|255563246|ref|XP_002522626.1| transcription initiation factor tfiid, putative [Ricinus communis]
gi|223538102|gb|EEF39713.1| transcription initiation factor tfiid, putative [Ricinus communis]
Length = 1885
Score = 947 bits (2448), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/692 (73%), Positives = 567/692 (81%), Gaps = 30/692 (4%)
Query: 583 IITRSAKPSDFKPAESVKLFYLGKELEDHKSLADQNVRPNSLIHLIRTKIHLLPRAQKLP 642
+ +++K DFKP E VK+FYLGKELEDHKSLA QNV+PNSL+HL+RTKIHLLPRAQ++P
Sbjct: 672 VKAKASKKLDFKPLEMVKIFYLGKELEDHKSLAAQNVQPNSLLHLVRTKIHLLPRAQRIP 731
Query: 643 GENKSLRPPGAFKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQA 702
GENKSLRPPGAFKKKSDLSVKDGH+FLMEYCEERPLLLSN GMGANLCTYYQKSSP DQ
Sbjct: 732 GENKSLRPPGAFKKKSDLSVKDGHIFLMEYCEERPLLLSNIGMGANLCTYYQKSSPSDQT 791
Query: 703 GALLCSGNNCLGNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLV 762
G L SGNN LGNV+ LEP DKSPFLGDIKAGCSQ SLETNMY+AP+F+HKVA+TD+LLV
Sbjct: 792 GVSLRSGNNSLGNVVVLEPTDKSPFLGDIKAGCSQLSLETNMYKAPIFSHKVASTDYLLV 851
Query: 763 RSAKGKISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLL 822
RSAKGK+SIRRID++AVV QQEPLMEV+SP SKNLQ Y INR+LV VYRE+ AA KRG +
Sbjct: 852 RSAKGKLSIRRIDRIAVVGQQEPLMEVLSPASKNLQAYIINRLLVYVYREYRAAEKRGTI 911
Query: 823 PCIGVDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYP 882
P I DELS FP +SE I+RKKLKECA LR+D NG WS KR F IPSE +L+K+ P
Sbjct: 912 PWIRADELSALFPYVSETILRKKLKECAVLRKDANGHLFWSKKRDFIIPSEEELKKMVLP 971
Query: 883 EHVCSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWN 942
E+VC+YESMQAGLYRLKHLGIT+LTLP S+S+AMSQLPDEAIALAAASHIERELQITPW+
Sbjct: 972 ENVCAYESMQAGLYRLKHLGITRLTLPTSVSTAMSQLPDEAIALAAASHIERELQITPWS 1031
Query: 943 LSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGG 1002
LSSNFVACT+QDRENIERLEITGVGDPSGRGLGFSYVRAAPKA +S+AM KK AA RGG
Sbjct: 1032 LSSNFVACTSQDRENIERLEITGVGDPSGRGLGFSYVRAAPKAPMSNAM-AKKKAAARGG 1090
Query: 1003 STVTGTDADLRRLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASGV---- 1058
STVTGTDADLRRLSMEAAREVLLKFNVPEE IAKQTRWHRIAMIRKLSSEQAASGV
Sbjct: 1091 STVTGTDADLRRLSMEAAREVLLKFNVPEEQIAKQTRWHRIAMIRKLSSEQAASGVKVDP 1150
Query: 1059 ---------------QLQQQTRGKCQEIWDRQVQSLSAADDDEIGSDSE-HSDLDSFAGD 1102
QLQQQTR KCQEIWDRQVQSLSA D DE+ SDSE +SDLDSFAGD
Sbjct: 1151 TTISKYARGQRMSFLQLQQQTREKCQEIWDRQVQSLSAVDGDELESDSEANSDLDSFAGD 1210
Query: 1103 LENLLDAEEFEEEESNYDTKHDKVEGVKGLKMRRRPIQVQAEEEIEDEAAEAAELCRLLM 1162
LENLLDAEE E +ESNY++K DK +GVKG+KMRR P Q QAEEEIEDEAAEAAELCRLLM
Sbjct: 1211 LENLLDAEECEGDESNYESKQDKADGVKGIKMRRHPSQAQAEEEIEDEAAEAAELCRLLM 1270
Query: 1163 DDDEAELKKKKKKTKAQVEGGLSLAKSISGLEIVERLKKANKPAKHIAITVQPNGSHTAN 1222
DDDEAE KKKKK A + GL + + E +K+ +K PNGS
Sbjct: 1271 DDDEAEQKKKKKTKTAGLVAGLLPGLKSNFVNSTEHIKQKDKG--------HPNGSFVPK 1322
Query: 1223 E-QIKDPKEEESLIAKRNLSGKVQAMKKNNVQ 1253
E IKD KE E+L K+ S KV+A+KKN Q
Sbjct: 1323 ESSIKDSKEVEALFIKKKKSEKVKALKKNGFQ 1354
Score = 378 bits (970), Expect = e-101, Method: Compositional matrix adjust.
Identities = 194/359 (54%), Positives = 251/359 (69%), Gaps = 11/359 (3%)
Query: 233 LADILKGPLDGQVSTPLPVLCVEDGKVILRFSEIFGIHEPLKKGKKRDQRYSTPKDKYNT 292
L+D ++ P DG+ S PLPVLCVEDG VILRFSEIFGIHEPLKKG+KRD+RYS K++Y +
Sbjct: 199 LSDAMEEPPDGKSSAPLPVLCVEDGLVILRFSEIFGIHEPLKKGEKRDRRYSIFKERYKS 258
Query: 293 MDVSSLVEEDEEVYLKGSGQGFPLFKEANIFQHGIFSLNDDDSELVKFGVEQDAATISEH 352
MDVS VE+DEE +LKGS Q F L N Q+ I + ND SE KFGV Q +A
Sbjct: 259 MDVSDFVEDDEEAFLKGSSQVFQLHSHVN--QYEIAASNDGGSESGKFGVMQRSA----Q 312
Query: 353 DEQRKDSCICSEPMKEESNVNPSVGWKSMPSPNFFPLDQHDWEENIVWDNSPAASDNSIE 412
+E+++ SC+ EPM ++ ++N GW+S P F+PLDQ DWE I WDNSPA S+NS+E
Sbjct: 313 NEEQRSSCVSGEPMNKDLSINIGTGWQS---PLFYPLDQQDWENRICWDNSPAVSENSVE 369
Query: 413 SHEIAGADVESALMRGIELDTGQNNFHER-STSPNEKDCIVNMQNSPVLSETFGSKSSSD 471
S ++G D+ + + +EL + N P+EKD + +SP+L E+FGS SS
Sbjct: 370 SCGLSGPDLADSYTKEMELGSQPQNIQSYLPVQPDEKDHNCFLHSSPILVESFGSLDSS- 428
Query: 472 NTSHLFTESRYHPQLLRLESQLDLDNHSHANGIKENVSIKLCQSDAVKRFSKHSLQNRDM 531
S L +HPQLLRLES ++ + H HA+ +EN ++++ Q+DA +RFSK +LQN+DM
Sbjct: 429 GPSDLPLSVTFHPQLLRLESHMEAEKHYHADDRRENNAVEVFQNDAFRRFSKLTLQNKDM 488
Query: 532 MEGSWLDNIIWEPVDAVGKPKLILDLQDEQMLFEILDNKDDEHPLLHAGAMIITRSAKP 590
M+GSWLDNIIWEP KPKLILDLQDEQMLFE+LDNKD +H LHAGAMI+TRS KP
Sbjct: 489 MDGSWLDNIIWEPNKTNMKPKLILDLQDEQMLFEVLDNKDSKHLQLHAGAMIMTRSLKP 547
>gi|224093308|ref|XP_002309876.1| histone acetyltransferase [Populus trichocarpa]
gi|222852779|gb|EEE90326.1| histone acetyltransferase [Populus trichocarpa]
Length = 1851
Score = 927 bits (2397), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 493/689 (71%), Positives = 558/689 (80%), Gaps = 39/689 (5%)
Query: 583 IITRSAKPSDFKPAESVKLFYLGKELEDHKSLADQNVRPNSLIHLIRTKIHLLPRAQKLP 642
+ +++K DFKP+E+VKLFYLGKELEDHKSL+ NV+PNSL+HL+RTKIHL PRAQK+P
Sbjct: 643 VKAKASKKLDFKPSETVKLFYLGKELEDHKSLSAHNVQPNSLLHLVRTKIHLWPRAQKIP 702
Query: 643 GENKSLRPPGAFKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQA 702
GENKSLRPPGAFKKKSDLSVKDGHVFLMEYCEERPL LSNAGMGANL TYYQK SP DQ
Sbjct: 703 GENKSLRPPGAFKKKSDLSVKDGHVFLMEYCEERPLSLSNAGMGANLRTYYQKLSPSDQT 762
Query: 703 GALLCSGNNCLGNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLV 762
G LL + + LGNV+ LE DKSPFLGDIKAGC QSSLETNMY+AP+F HKV TD+LLV
Sbjct: 763 GILLRNEKSSLGNVVILEQTDKSPFLGDIKAGCRQSSLETNMYKAPLFPHKVPPTDYLLV 822
Query: 763 RSAKGKISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLL 822
RSAKGK+SIRRID+VAVV QQEPLMEV++P KNLQ Y +NR+L+ +YREF AA KRG+L
Sbjct: 823 RSAKGKLSIRRIDRVAVVGQQEPLMEVLTPAPKNLQAYILNRLLLYLYREFRAAEKRGML 882
Query: 823 PCIGVDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYP 882
P I DELS FPN+SE I+RKKLKEC LR++ NG W+ KR F IPSE +L+K+ P
Sbjct: 883 PWIRADELSAHFPNISETILRKKLKECTILRKNANGHLFWAKKRDFIIPSEEELKKMVLP 942
Query: 883 EHVCSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWN 942
E+VC+YESMQAGLYRLKHLGIT+LTLP S+S+AMSQLPDEAIALAAASHIERELQITPW+
Sbjct: 943 ENVCAYESMQAGLYRLKHLGITRLTLPTSVSTAMSQLPDEAIALAAASHIERELQITPWS 1002
Query: 943 LSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGG 1002
LSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVR APKA +S+A+VKKKA A RGG
Sbjct: 1003 LSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRTAPKAPISNAVVKKKAGAGRGG 1062
Query: 1003 STVTGTDADLRRLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASGV---- 1058
STVTGTDADLRRLSMEAAREVLLKFNVP+E IAKQTRWHRIAMIRKLSSEQA+ GV
Sbjct: 1063 STVTGTDADLRRLSMEAAREVLLKFNVPDEQIAKQTRWHRIAMIRKLSSEQASCGVKVDP 1122
Query: 1059 ---------------QLQQQTRGKCQEIWDRQVQSLSAADDDEIGSDSE-HSDLDSFAGD 1102
QL QQTR KCQEIWDRQVQSLSA D DEI SDSE +SDLDSFAGD
Sbjct: 1123 TTISKYARGQRMSFLQLHQQTREKCQEIWDRQVQSLSALDGDEIESDSEANSDLDSFAGD 1182
Query: 1103 LENLLDAEEFEEEESNYDTKHDKVEGVKGLKMRRRPIQVQAEEEIEDEAAEAAELCRLLM 1162
LENLLDAEEFE +E+NY++KHDK +GVKG+KMRRRP Q QAEEE EDEAAEAAELCRLLM
Sbjct: 1183 LENLLDAEEFEGDENNYESKHDKGDGVKGIKMRRRPSQAQAEEEFEDEAAEAAELCRLLM 1242
Query: 1163 DDDEAELKKKKKKTKAQVEGGLSLAKSISGLEIVERLKKANKPAKHIAITVQPNGSHTAN 1222
DDDEAE K+KKK V+ ++ K + ++ V KK NK QPNGS+
Sbjct: 1243 DDDEAEQKRKKKTRNVGVDAVVTPTKP-NFVDNVHWGKKMNK--------TQPNGSYALK 1293
Query: 1223 E-QIKDPKEEESLIAKRNLSGKVQAMKKN 1250
+ I+D KE +S KV+ +KKN
Sbjct: 1294 QNNIRDLKE---------MSEKVKTVKKN 1313
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 305/561 (54%), Positives = 368/561 (65%), Gaps = 50/561 (8%)
Query: 35 MFGNVDYAGDLDVDYLDEDAKEHLAAVADKLGPSLTDIDVWNSQSCFQLFCSYCLLSVNS 94
MFGNVD +GDLD DYLDEDAKEHLAA+ADKLG SLT+ID LSV S
Sbjct: 1 MFGNVDNSGDLDADYLDEDAKEHLAALADKLGSSLTEID----------------LSVKS 44
Query: 95 PQPPVDAVEQDYDKKAEDAVDYEDIDEQYEGPEIQIASEEDYLLPKKEYFAAEVSLAALK 154
PQ DA EQDYD KAEDAVDYED DEQYEGPEIQ SEEDYLL KK+Y +E + L+
Sbjct: 45 PQTSTDAAEQDYDAKAEDAVDYEDFDEQYEGPEIQAVSEEDYLLSKKDYMLSE---STLQ 101
Query: 155 PTASPFDDENYDE--DEELEKEHEEVDKETEDTTTILSGEQVECATAVPDGEKSPEGDPQ 212
P S DDE+YDE EELEKE DK+ E T LSG+Q V GE
Sbjct: 102 PPIS--DDEDYDEGVKEELEKEPVVSDKKLEVQTASLSGQQ---DVGVVSGE-------- 148
Query: 213 VGSLGAEEEMTAGVKDYDEELADILKGPLDGQVSTPLPVLCVEDGKVILRFSEIFGIHEP 272
+ S+G E V D EE D +KG LD + TPLP+LC+EDG ILRFSEIF IHEP
Sbjct: 149 LVSVGFESSDVEFV-DIHEEETDTVKGSLD-KGHTPLPILCIEDGMEILRFSEIFSIHEP 206
Query: 273 LKKGKKRDQRYSTPKDKYNTMDVSSLVEEDEEVYLKGSGQGFPLFKEANIFQHGIFSLND 332
LKKG+KRD RYS K+KY +MDVS +VEEDEE +LK SGQ P N QH I ++
Sbjct: 207 LKKGEKRDHRYSILKEKYTSMDVSDIVEEDEEAFLKDSGQMLPSHLHVN--QHDISIFSE 264
Query: 333 DDSELVKFGVEQDAATIS-EHDEQRKDSCICSEPMKEESNVNPSVGWKSMPSPNFFPLDQ 391
D SEL +FG A +S + +EQR++S + +EP+ N V WKS F PLDQ
Sbjct: 265 DASELARFGSMHGAIQMSVQIEEQRRNSYLSAEPL------NKDVVWKSPLDSKFNPLDQ 318
Query: 392 HDWEENIVWDNSPAASDNSIESHEIAGADVESALMRGIELDTGQNNFH-ERSTSPNEK-- 448
HDWEE I+WDNSP SDNS+ES + +G+++ S+ + E T N H E NE
Sbjct: 319 HDWEERILWDNSPVISDNSVESCDQSGSELGSSFVIETEQVTSPPNLHSEHPVELNENLD 378
Query: 449 DCIVNMQNSPVLSETFGSKSSSDNTSHLFTESRYHPQLLRLESQLDLDNHSHANGIKENV 508
+C N S VL E+FGS S+ + ESR HPQLLRLES+L+ D+ +H N +EN
Sbjct: 379 NCFWN--RSYVLLESFGSGDYSEPGNLPLLESRCHPQLLRLESRLEEDSSNHVNDRRENN 436
Query: 509 SIKLCQSDAVKRFSKHSLQNRDMMEGSWLDNIIWEPVDAVGKPKLILDLQDEQMLFEILD 568
+++L +SDA++RFSK +LQNRD+MEGSWLD+IIWEP +A KPKLILDLQDEQMLFEILD
Sbjct: 437 AVELHKSDALRRFSKLTLQNRDLMEGSWLDDIIWEPCEANIKPKLILDLQDEQMLFEILD 496
Query: 569 NKDDEHPLLHAGAMIITRSAK 589
++D +H LHAGAMIITR K
Sbjct: 497 HRDSKHLQLHAGAMIITRPLK 517
>gi|224140747|ref|XP_002323740.1| histone acetyltransferase [Populus trichocarpa]
gi|222866742|gb|EEF03873.1| histone acetyltransferase [Populus trichocarpa]
Length = 1857
Score = 914 bits (2361), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 489/672 (72%), Positives = 547/672 (81%), Gaps = 36/672 (5%)
Query: 583 IITRSAKPSDFKPAESVKLFYLGKELEDHKSLADQNVRPNSLIHLIRTKIHLLPRAQKLP 642
+ +++K DFKP+E+VK+FYL KELEDH SLA QNV+PNSL+HL+RTKIHL PRAQK+P
Sbjct: 646 VKAKASKKLDFKPSETVKIFYLRKELEDHMSLAAQNVQPNSLLHLVRTKIHLWPRAQKIP 705
Query: 643 GENKSLRPPGAFKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQA 702
GENKSLRPPGAFKKKSDLSVKDGH+FLMEYCEERPLLLSN GMGANL TYYQKSSPGDQ
Sbjct: 706 GENKSLRPPGAFKKKSDLSVKDGHIFLMEYCEERPLLLSNVGMGANLRTYYQKSSPGDQT 765
Query: 703 GALLCSGNNCLGNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLV 762
G L + LGNV+ LE DKSPFLGDIKAGCSQSSLETNMY+AP+F HKV TD+LLV
Sbjct: 766 GISLRNEKRSLGNVVILEQTDKSPFLGDIKAGCSQSSLETNMYKAPIFPHKVPPTDYLLV 825
Query: 763 RSAKGKISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLL 822
RSAKGK+ +RRID+VAV+ QQEPLMEV++P SKNLQ Y INR+L+ +YRE AA KRG
Sbjct: 826 RSAKGKLCLRRIDRVAVIGQQEPLMEVLAPASKNLQAYIINRLLLYLYRELRAAEKRGTP 885
Query: 823 PCIGVDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYP 882
P I DELS FP++ E I+RKKLKECA LR+D NG W+ KR F IPSE +L+K+ P
Sbjct: 886 PWIRADELSALFPSIPETILRKKLKECAVLRKDANGHLFWAKKRDFIIPSEEELKKMVLP 945
Query: 883 EHVCSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWN 942
E+VC+YESMQAGLYRLKHLGIT+LTLPAS+S+AMSQLPDEAIALAAASHIERELQITPW+
Sbjct: 946 ENVCAYESMQAGLYRLKHLGITKLTLPASVSTAMSQLPDEAIALAAASHIERELQITPWS 1005
Query: 943 LSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGG 1002
LSSNFVACTNQDR NIERLEITGVGDPSGRGLGFSYVRAAPKA +S+AM+KKKA A RGG
Sbjct: 1006 LSSNFVACTNQDRANIERLEITGVGDPSGRGLGFSYVRAAPKAPMSNAMMKKKAGAGRGG 1065
Query: 1003 STVTGTDADLRRLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASGV---- 1058
STVTGTDADLRRLSMEAAREVLLKFNVP+E IAKQTRWHRIAMIRKLSSEQA+ GV
Sbjct: 1066 STVTGTDADLRRLSMEAAREVLLKFNVPDEQIAKQTRWHRIAMIRKLSSEQASCGVKVDP 1125
Query: 1059 ---------------QLQQQTRGKCQEIWDRQVQSLSAADDDEIGSDSE-HSDLDSFAGD 1102
QLQQQTR KCQEIWDRQVQSLSA D DEI SDSE +SDLDSFAGD
Sbjct: 1126 TTISKYARGQRMSFLQLQQQTREKCQEIWDRQVQSLSALDGDEIESDSEANSDLDSFAGD 1185
Query: 1103 LENLLDAEEFEEEESNYDTKHDKVEGVKGLKMRRRPIQVQAEEEIEDEAAEAAELCRLLM 1162
LENLLDAEEFE +ESNY++KHDK + VKG+KMRRRP Q QAEEE EDEAAEAAELCRLLM
Sbjct: 1186 LENLLDAEEFEGDESNYESKHDKGDCVKGIKMRRRPSQAQAEEEFEDEAAEAAELCRLLM 1245
Query: 1163 DDDEAELKKKKKKTKAQVEGGLSLA---KSISGLEIVERLKKANKPAKHIAITVQPNGSH 1219
DDDEA +KK K GGL+ K S ++ V R KK NK QP+GS+
Sbjct: 1246 DDDEA----GQKKKKKIKTGGLNAVLAPKKPSFVDNVHRGKKMNK--------TQPSGSY 1293
Query: 1220 TANEQ-IKDPKE 1230
T E I+D KE
Sbjct: 1294 TPKENSIRDSKE 1305
Score = 514 bits (1324), Expect = e-142, Method: Compositional matrix adjust.
Identities = 306/557 (54%), Positives = 374/557 (67%), Gaps = 39/557 (7%)
Query: 35 MFGNVDYAGDLDVDYLDEDAKEHLAAVADKLGPSLTDIDVWNSQSCFQLFCSYCLLSVNS 94
MFGNVD +GDLD DYLDEDAKEHLAA+ADKLG SLT+ID LSV S
Sbjct: 1 MFGNVDNSGDLDADYLDEDAKEHLAALADKLGSSLTEID----------------LSVKS 44
Query: 95 PQPPVDAVEQDYDKKAEDAVDYEDIDEQYEGPEIQIASEEDYLLPKKEYFAAEVSLAALK 154
Q DA EQDYD KAEDAVDYED DEQYEGPEIQ SEEDYLL KK Y +E + L+
Sbjct: 45 HQTSTDAAEQDYDAKAEDAVDYEDFDEQYEGPEIQGVSEEDYLLSKKNYILSE---STLQ 101
Query: 155 PTASPFDDENYDEDEELEKEHEEVDKETEDTTTILSGEQVECATAVPDGEKSPEGDPQVG 214
P S +D + D +EELEKE DK E T L+G VE KS + D ++G
Sbjct: 102 PPTSDNEDYDEDVEEELEKEPVVSDKILEFQTASLTGVGVE---------KSSQDDVELG 152
Query: 215 SLGAEEEMTAGVKDYDEELADILKGPLDGQVSTPLPVLCVEDGKVILRFSEIFGIHEPLK 274
S+ +E A +D EE AD +KGPLDG+ +PLP+L +EDG IL+FSEIF IHEPLK
Sbjct: 153 SMDSESS-DAKSEDIHEEEADHVKGPLDGKGPSPLPILFIEDGMEILKFSEIFSIHEPLK 211
Query: 275 KGKKRDQRYSTPKDKYNTMDVSSLVEEDEEVYLKGSGQGFPLFKEANIFQHGIFSLNDDD 334
KG+KRD RYS K+KY +MD S +VEEDEEV+LK SGQ FP N QH I L++D
Sbjct: 212 KGQKRDHRYSIFKEKYTSMDASDIVEEDEEVFLKDSGQLFPSHLLVN--QHDISILSEDA 269
Query: 335 SELVKFGVEQDAATIS-EHDEQRKDSCICSEPMKEESNVNPSVGWKSMPSPNFFPLDQHD 393
+EL +FG A S + +EQRK+S + +EPM EE V WKS F+PLDQ D
Sbjct: 270 AELARFGTVHGAIKTSVQIEEQRKNSYLSAEPMNEE------VEWKSPVHSKFYPLDQQD 323
Query: 394 WEENIVWDNSPAASDNSIESHEIAGADVESALMRGIE-LDTGQNNFHERSTSPNEKDCIV 452
WEE I+WDNSPA SDNS+ES +++G D S+ +R E + + QN E NE
Sbjct: 324 WEERILWDNSPAISDNSVESFDLSGPDTGSSFIRESEQVTSPQNLCSELPVELNENTSNF 383
Query: 453 NMQNSPVLSETFGSKSSSDNTSHLFTESRYHPQLLRLESQLDLDNHSHANGIKENVSIKL 512
S VL E+FGS+ SS+ + F+ESR HPQLLRLESQ+++D+ SH + +EN S +L
Sbjct: 384 LRNRSSVLLESFGSEDSSEPGNLPFSESRCHPQLLRLESQMEVDSSSHVDDRRENNSAEL 443
Query: 513 CQSDAVKRFSKHSLQNRDMMEGSWLDNIIWEPVDAVGKPKLILDLQDEQMLFEILDNKDD 572
+SDAV+RFSK +LQNRD+MEGSWLDNIIWEP + KPKLILDLQD+QMLFEILD++D
Sbjct: 444 HESDAVRRFSKLTLQNRDLMEGSWLDNIIWEPNETNIKPKLILDLQDKQMLFEILDHRDS 503
Query: 573 EHPLLHAGAMIITRSAK 589
+H LHAGAMIITR+ K
Sbjct: 504 KHLQLHAGAMIITRTLK 520
>gi|356529777|ref|XP_003533464.1| PREDICTED: transcription initiation factor TFIID subunit 1-A-like
[Glycine max]
Length = 1910
Score = 872 bits (2254), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 474/692 (68%), Positives = 550/692 (79%), Gaps = 29/692 (4%)
Query: 583 IITRSAKPSDFKPAESVKLFYLGKELEDHKSLADQNVRPNSLIHLIRTKIHLLPRAQKLP 642
+ +++K DFK +E+VK+FYLG+ELEDHKSLA QNV+PNSL+HL+RTKIHL P+AQ++P
Sbjct: 714 VKAKASKKLDFKVSETVKIFYLGRELEDHKSLAAQNVQPNSLLHLVRTKIHLWPKAQRVP 773
Query: 643 GENKSLRPPGAFKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQA 702
GENKSLRPPGAFKKKSDLSVKDGHVFLMEYCEERPLLLSN GMGA LCTYYQK SP DQ+
Sbjct: 774 GENKSLRPPGAFKKKSDLSVKDGHVFLMEYCEERPLLLSNVGMGARLCTYYQKCSPDDQS 833
Query: 703 GALLCSGNNCLGNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLV 762
G+LL + ++ LG++++L+P DK PFLGD+K GCSQSSLETNMYRAP+F HKV TD+LLV
Sbjct: 834 GSLLRNTDSRLGHIISLDPADKFPFLGDLKPGCSQSSLETNMYRAPIFPHKVPLTDYLLV 893
Query: 763 RSAKGKISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLL 822
RS+KGK+S+RRIDK+ VV QQEPLMEV+SPGSKNLQTY +NR+LV++ REF AA KR L
Sbjct: 894 RSSKGKLSLRRIDKINVVGQQEPLMEVLSPGSKNLQTYMMNRLLVHMCREFQAAEKRHLP 953
Query: 823 PCIGVDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYP 882
P IGVDE QFP SEA RKK+KE A L+R NG+ + KR F I SE +LRK+ P
Sbjct: 954 PYIGVDEFLSQFPYQSEASFRKKIKEYANLQRGTNGQSILVKKRNFRIWSEDELRKMVTP 1013
Query: 883 EHVCSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWN 942
E VC+YESMQA LYRLKHLGIT+ T P +ISSAMS+LPDEAIALAAASHIERELQITPWN
Sbjct: 1014 ELVCAYESMQASLYRLKHLGITE-THPTNISSAMSRLPDEAIALAAASHIERELQITPWN 1072
Query: 943 LSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGG 1002
LS NFVACT+Q +ENIER+EITGVGDPSGRG+GFSY RA PKA VSSAMVKKKAAANRGG
Sbjct: 1073 LSCNFVACTSQGKENIERMEITGVGDPSGRGMGFSYARAPPKAPVSSAMVKKKAAANRGG 1132
Query: 1003 STVTGTDADLRRLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASGV---- 1058
STVTGTDADLRRLSM+AAREVLLKFNVPEE+IAKQTRWHRIAMIRKLSSEQA SGV
Sbjct: 1133 STVTGTDADLRRLSMDAAREVLLKFNVPEEVIAKQTRWHRIAMIRKLSSEQATSGVKVDP 1192
Query: 1059 ---------------QLQQQTRGKCQEIWDRQVQSLSAADDDEIGSDSE-HSDLDSFAGD 1102
QLQQQTR KCQEIWDRQVQSLSA + DE SDSE +SDLDSFAGD
Sbjct: 1193 TTISKYARGQRMSFLQLQQQTREKCQEIWDRQVQSLSAVNGDENESDSEGNSDLDSFAGD 1252
Query: 1103 LENLLDA-EEFEEEESNYDTKHDKVEGVKGLKMRRRPIQVQAEEEIEDEAAEAAELCRLL 1161
LENLLDA E E EE D K DK +GVKGLKMRRRP QAEEEIEDEAAEAAELCRLL
Sbjct: 1253 LENLLDAEECEEGEEGTNDLKRDKGDGVKGLKMRRRPTLAQAEEEIEDEAAEAAELCRLL 1312
Query: 1162 MDDDEAELKKKKKKTKAQVEGGLSLAKSISGLEIVERLKKANKPAKHIAITVQPNGS-HT 1220
MDD EA+ +K K + + + A+ + ++ A + K I T+Q +G+ H
Sbjct: 1313 MDDYEAD-----RKKKKKAKVMVGEARLVPKMQSKFSFDNAEQ-VKQITNTLQLDGTNHL 1366
Query: 1221 ANEQIKDPKEEESLIAKRNLSGKVQAMKKNNV 1252
+ I D +EEE++ AK++ S KV KKN++
Sbjct: 1367 KEDAITDLREEENVPAKKSKSLKVNKAKKNDI 1398
Score = 474 bits (1221), Expect = e-130, Method: Compositional matrix adjust.
Identities = 308/614 (50%), Positives = 391/614 (63%), Gaps = 51/614 (8%)
Query: 3 GYDSGSASKDGRDEDDEEEYEDVSGGNRLLGFMFGNVDYAGDLDVDYLDEDAKEHLAAVA 62
GYDS S S+DGRDEDDEEEYED GNR LGFMFGNVD +GDLDVDYLDEDAKEHL+A+A
Sbjct: 2 GYDSDSPSQDGRDEDDEEEYEDSGKGNRFLGFMFGNVDNSGDLDVDYLDEDAKEHLSALA 61
Query: 63 DKLGPSLTDIDVWNSQSCFQLFCSYCLLSVNSPQPPVDAVEQDYDKKAEDAVDYEDIDEQ 122
DKLGPSLTDIDV SPQ P D VEQD D KAEDAVDYEDIDE+
Sbjct: 62 DKLGPSLTDIDVR-----------------KSPQTPPDVVEQDCDVKAEDAVDYEDIDEE 104
Query: 123 YEGPEIQIASEEDYLLPKKEYFAAEVSLAALKPTASPFDDENYDEDEELEKEHEEVDKET 182
Y+GPE + A+EEDYLLPKKE+F++E S+ L+ AS FDDENYDE+ E E++ D +
Sbjct: 105 YDGPETEAANEEDYLLPKKEFFSSEASV-CLESKASVFDDENYDEESEKEQDFVNDDSKV 163
Query: 183 ED-------------------TTTILSGEQVECATAVPDGEKSPEGDPQVGSLGAEEEMT 223
+ + +LSGEQ E E S E + V S EE+
Sbjct: 164 YNIPLADLHVMLVSVLIKFTYASFVLSGEQEESFVDASKEESSLEHELHVDS-PQTEELD 222
Query: 224 AGVKDYDEELADILKGPLDGQVSTPLPVLCVEDGKVILRFSEIFGIHEPLKKGKKRDQRY 283
A V+ +E+ ++ K + + PLPVLCVEDG ILRFSEIFGIHEPL+KG+KR+ R+
Sbjct: 223 ADVQKLEEDGPEVQKRSM----AMPLPVLCVEDGVAILRFSEIFGIHEPLRKGEKREHRH 278
Query: 284 STPKDKYNTMDVS-SLVEEDEEVYLKGSGQGFPLFKEANIFQHGIFSLNDDDSELVKFG- 341
S P+D Y + D++ VEEDEE +LKG Q L K+ + + + ND D E KFG
Sbjct: 279 SIPRDIYKSFDLTDDFVEEDEEEFLKGFSQSLSLSKQVCVVHNDVSESNDVDLEFPKFGF 338
Query: 342 VEQDAATISEHDEQRKDSCICSEPMKEESNVNPSVGWKSMPS--PNFFPLDQHDWEENIV 399
+ DA+ + D+Q KDSC +EPMK + WK P NF+PLDQ DWE+ I+
Sbjct: 339 LHADASVDRKDDQQSKDSCHSAEPMK--GDFVEDHFWKDHPFMLANFYPLDQQDWEDKIL 396
Query: 400 WDNSPAASDNSIESHEIAGADVESALMRGIELDTGQNNFH-ERSTSPNEKDCIVNMQNSP 458
W NSP S N++ES EI+G ++ ++ IE+++G +N E +K+ V M++SP
Sbjct: 397 WGNSPVPSYNNVESCEISGPELGASGGSEIEIESGIHNIQMEPQKVLEDKNHNVLMRSSP 456
Query: 459 VLSETFGSKSSSDNTSHLFTESRYHPQLLRLESQLDLDNHSHANGIKENVSIKLCQSDAV 518
V E FGS+ SS ++L + S +HPQLLRLES+ ++D+ S A+G +S + QS V
Sbjct: 457 VKLEPFGSRDSSGAKTNLISRSLFHPQLLRLESRSEVDSSSLADGRDAEIS-EHNQSGQV 515
Query: 519 KRFSKHSLQNRDMMEGSWLDNIIWEPVDAVG-KPKLILDLQDEQMLFEILDNKDDEHPLL 577
KRF+K QNRDMMEGSWLD IIWE +D KPKLI DLQD+QM FE+LD KD H L
Sbjct: 516 KRFTKVISQNRDMMEGSWLDKIIWEELDQPSVKPKLIFDLQDDQMHFEVLDTKDGTHLCL 575
Query: 578 HAGAMIITRSAKPS 591
HAGAMI+T S K S
Sbjct: 576 HAGAMILTHSLKLS 589
>gi|15223289|ref|NP_174552.1| transcription initiation factor TFIID subunit 1-A [Arabidopsis
thaliana]
gi|75157524|sp|Q8LRK9.1|TAF1A_ARATH RecName: Full=Transcription initiation factor TFIID subunit 1-A;
Short=AtTAF1a; AltName: Full=TAFII250-A
gi|21105767|gb|AAM34782.1|AF510669_1 HAF1 [Arabidopsis thaliana]
gi|332193403|gb|AEE31524.1| transcription initiation factor TFIID subunit 1-A [Arabidopsis
thaliana]
Length = 1919
Score = 863 bits (2231), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 459/685 (67%), Positives = 534/685 (77%), Gaps = 29/685 (4%)
Query: 577 LHAG-----AMIITRSAKPSDFKPAESVKLFYLGKELEDHKSLADQNVRPNSLIHLIRTK 631
LH G + + ++++ DFK E+VK+FY GKEL+D KSLA QNV+PNSL+HLIRTK
Sbjct: 675 LHVGIEESVSSLRAKASRKLDFKETEAVKMFYKGKELDDEKSLAAQNVQPNSLVHLIRTK 734
Query: 632 IHLLPRAQKLPGENKSLRPPGAFKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCT 691
+HL P AQKLPGENKSLRPPGAFKKKSDLS KDGHVFLMEYCEERPL+LSNAGMGANLCT
Sbjct: 735 VHLWPWAQKLPGENKSLRPPGAFKKKSDLSTKDGHVFLMEYCEERPLMLSNAGMGANLCT 794
Query: 692 YYQKSSPGDQAGALLCSGNNCLGNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFT 751
YYQKSSP DQ G LL + ++ LGNV+ LEPGDKSPFLG+I AGCSQSS+ETNMY+AP+F
Sbjct: 795 YYQKSSPEDQRGNLLRNQSDTLGNVMILEPGDKSPFLGEIHAGCSQSSVETNMYKAPIFP 854
Query: 752 HKVATTDFLLVRSAKGKISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYR 811
++ +TD+LLVRS KGK+S+RRIDK+ VV QQEP MEVMSPGSKNLQTY +NRMLV VYR
Sbjct: 855 QRLQSTDYLLVRSPKGKLSLRRIDKIVVVGQQEPRMEVMSPGSKNLQTYLVNRMLVYVYR 914
Query: 812 EFSAAAKRGLLPCIGVDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIP 871
EF + G I DELS F NL++AII+K +K A +RD NG+ W+ K + P
Sbjct: 915 EF--FKRGGGEHPIAADELSFLFSNLTDAIIKKNMKIIACWKRDKNGQSYWTKKDSLLEP 972
Query: 872 SEGDLRKLAYPEHVCSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASH 931
E +L+KL PEHVCSYESM AGLYRLKHLGIT+ TLPASIS+A++QLPDEAIALAAASH
Sbjct: 973 PESELKKLVAPEHVCSYESMLAGLYRLKHLGITRFTLPASISNALAQLPDEAIALAAASH 1032
Query: 932 IERELQITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAM 991
IERELQITPWNLSSNFVACTNQDR NIERLEITGVGDPSGRGLGFSYVRAAPKA ++
Sbjct: 1033 IERELQITPWNLSSNFVACTNQDRANIERLEITGVGDPSGRGLGFSYVRAAPKAPAAAGH 1092
Query: 992 VKKKAAANRGGSTVTGTDADLRRLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSS 1051
+KKKAAA RG TVTGTDADLRRLSMEAAREVL+KFNVP+E+IAKQTRWHRIAMIRKLSS
Sbjct: 1093 MKKKAAAGRGAPTVTGTDADLRRLSMEAAREVLIKFNVPDEIIAKQTRWHRIAMIRKLSS 1152
Query: 1052 EQAASGV-------------------QLQQQTRGKCQEIWDRQVQSLSAADDDEIGSDSE 1092
EQAASGV Q+QQQ R KCQEIWDRQ+ SLSA D DE S++E
Sbjct: 1153 EQAASGVKVDPTTIGKYARGQRMSFLQMQQQAREKCQEIWDRQLLSLSAFDGDENESENE 1212
Query: 1093 -HSDLDSFAGDLENLLDAEEFEEEESNYDTKHDKVEGVKGLKMRRRPIQVQAEEEIEDEA 1151
+SDLDSFAGDLENLLDAEE E E + +K+DK++GVKGLKMRRRP QV+ +EEIEDEA
Sbjct: 1213 ANSDLDSFAGDLENLLDAEEGGEGEESNISKNDKLDGVKGLKMRRRPSQVETDEEIEDEA 1272
Query: 1152 AEAAELCRLLMDDDEAELKKKKKKTKAQVEGGLSLAKSISGLEIVERLKKANKPAKHIAI 1211
E AELCRLLM D++ + KKKK K + G + L+ E ++KAN K I
Sbjct: 1273 TEYAELCRLLMQDEDQKKKKKKMKGVGEGMGSYPPPRPNIALQSGEPVRKANAMDKK-PI 1331
Query: 1212 TVQPNGSHTANEQ-IKDPKEEESLI 1235
+QP+ S NE IKD + +S+I
Sbjct: 1332 AIQPDASFLVNESTIKDNRNVDSII 1356
Score = 384 bits (986), Expect = e-103, Method: Compositional matrix adjust.
Identities = 259/576 (44%), Positives = 355/576 (61%), Gaps = 57/576 (9%)
Query: 32 LGFMFGNVDYAGDLDVDYLDEDAKEHLAAVADKLGPSLTDIDVWNSQSCFQLFCSYCLLS 91
LGF+FGNVD +GDLD DYLDEDAKEHL+A+ADKLG SL DI+ L
Sbjct: 30 LGFIFGNVDNSGDLDADYLDEDAKEHLSALADKLGSSLPDIN----------------LL 73
Query: 92 VNSPQPPVDAVEQDYDKKAEDAVDYEDIDEQYEGPEIQIASEEDYLLPKKEYFAAEVSLA 151
S + D EQDYD+KAEDAVDYEDIDE+Y+GPE+Q+ SEED+LLPKKEYF+ V+L
Sbjct: 74 AKSERTASDPAEQDYDRKAEDAVDYEDIDEEYDGPEVQVVSEEDHLLPKKEYFSTAVALG 133
Query: 152 ALKPTASPFDDENYDEDEELEKEHEEVDK--ETEDTTTILSGEQVECATAVPDGEKSPEG 209
+LK AS FDDE+YDE+EE E+E V+K ETE ++ E +K+ E
Sbjct: 134 SLKSRASVFDDEDYDEEEEQEEEQAPVEKSLETEKREPVVLKE-----------DKALEY 182
Query: 210 DPQVGSLGAEEEMTAGVKDYDEELADILKGPLDGQVSTPLPVLCVEDGKVILRFSEIFGI 269
+ + L E+ M +EE+ ++L+G LD + +TPLP L VEDG VIL+FSEIF I
Sbjct: 183 EEEASILDKEDHMDT-EDVQEEEVDELLEGTLDDKGATPLPTLYVEDGMVILQFSEIFAI 241
Query: 270 HEPLKKGKKRDQRYSTPKDKYNTMDVSSLVEEDEEVYLKGSGQGFPLFKEANIFQHGIFS 329
HEP +K +R+ RY T +DKY +MD+S LVE+DEEV LK G+ ++A++ Q +
Sbjct: 242 HEPPQKRDRRENRYVTCRDKYKSMDISELVEDDEEVLLKSHGRIDTHVEQADLIQLDVPF 301
Query: 330 LNDDDSELVKFGVEQDAATIS-------EHDEQRKDSCICSEPMKEESNVNPSVGWKSMP 382
+ +LVK A+TI E + +DSCI E +K++ + S +S
Sbjct: 302 PIREGLQLVK------ASTIGGITPESREFTKLGRDSCIMGELLKQDFIDDNSSLCQSQL 355
Query: 383 SPNFFPLDQHDWEENIVWDNSPAASDNSIESHEIAGADVESALMRGIELDTGQ---NNFH 439
S FPLDQH+WE I+W++SP S NS E E G + E L++G +T Q N +
Sbjct: 356 SMQVFPLDQHEWERRIIWEHSPEISGNSGEIFE-PGLEPEGMLVKGTNSETEQESLNVVN 414
Query: 440 ERSTSPNEKDCIVNMQNSPVLSETFGSKSSSDNTSHLFTESRYHPQLLRLESQLDLDNHS 499
R + + V S L E+FGS+ S +T+ +SR+HPQLLRLESQ D +NH
Sbjct: 415 SRVQVQADNNMFVPF--SANLLESFGSRGSQ-STNESTNKSRHHPQLLRLESQWD-ENHL 470
Query: 500 HAN---GIKENVSIKLCQSDAVKRFSKHSLQNRDMMEGSWLDNIIWEPVDAVGKPKLILD 556
N G+K+ IK + DA+ RFS+ L+ RD+ + +WLD+IIW+ + + KLI D
Sbjct: 471 SGNDEAGVKK---IKRLEKDALGRFSRLVLRERDLGDEAWLDSIIWDSEKELSRSKLIFD 527
Query: 557 LQDEQMLFEILDNKDDEHPLLHAGAMIITRSAKPSD 592
LQDEQM+FEI DN++ ++ LHAGAMI++RS+K D
Sbjct: 528 LQDEQMVFEIFDNEESKNLQLHAGAMIVSRSSKSKD 563
>gi|356510353|ref|XP_003523903.1| PREDICTED: transcription initiation factor TFIID subunit 1-A-like
[Glycine max]
Length = 1919
Score = 845 bits (2183), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 476/722 (65%), Positives = 550/722 (76%), Gaps = 59/722 (8%)
Query: 583 IITRSAKPSDFKPAESVKLFYLGKELEDHKSLADQNVRPNSLIHLIRTKIHLLPRAQKLP 642
+ +++K DFK +E+VK+FYLG+ELEDHKSLA QNV+PNSL+HL+RTKIHL P+AQ++P
Sbjct: 694 VKAKASKKLDFKVSETVKIFYLGRELEDHKSLAAQNVQPNSLLHLVRTKIHLWPKAQRVP 753
Query: 643 GENKSLRPPGAFKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQA 702
GENKSLRPPGAFKKKSDLSVKDGHVFLME+CEERPLLLSN GMGA LCTYYQK SP DQ+
Sbjct: 754 GENKSLRPPGAFKKKSDLSVKDGHVFLMEHCEERPLLLSNVGMGARLCTYYQKCSPDDQS 813
Query: 703 GALLCSGNNCLGNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLV 762
G+LL + +N LG++++L+P DKSPFLGD+K GC+QSSLETNMYRAPVF HKV TD+LLV
Sbjct: 814 GSLLRNTDNSLGHIISLDPADKSPFLGDLKPGCTQSSLETNMYRAPVFPHKVPLTDYLLV 873
Query: 763 RSAKGKISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLL 822
RS+KGK+S+RRIDK+ VV QQEPLMEV+SPGSKNLQ Y INR+LV++ REF AA KR +
Sbjct: 874 RSSKGKLSLRRIDKINVVGQQEPLMEVLSPGSKNLQNYMINRLLVHMCREFQAAEKRHMP 933
Query: 823 PCIGVDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYP 882
P I VDE QFP SEA RKK+KE A L+R NG+ + KR F I SE +LRK+ P
Sbjct: 934 PYIRVDEFLSQFPYQSEASFRKKIKEYANLQRGTNGQSILVKKRNFRIWSEDELRKMVTP 993
Query: 883 EHVCSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWN 942
E VC+YESMQAGLYRLKHLGIT+ T P +ISSAMS+LPDEAIALAAASHIERELQITPWN
Sbjct: 994 ELVCAYESMQAGLYRLKHLGITE-THPTNISSAMSRLPDEAIALAAASHIERELQITPWN 1052
Query: 943 LSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGG 1002
LSSNFVACT+Q +ENIER+EITGVGDPSGRG+GFSY RA PKA VSSAMVKKKAAANRGG
Sbjct: 1053 LSSNFVACTSQGKENIERMEITGVGDPSGRGMGFSYARAPPKAPVSSAMVKKKAAANRGG 1112
Query: 1003 STVTGTDADLRRLSMEAARE------------------------------VLLKFNVPEE 1032
STVTGTDADLRRLSM+AARE VLLKFNVP+E
Sbjct: 1113 STVTGTDADLRRLSMDAAREVCGILAICSELIAYVIPRVPVFNLKYGLIQVLLKFNVPDE 1172
Query: 1033 MIAKQTRWHRIAMIRKLSSEQAASGV-------------------QLQQQTRGKCQEIWD 1073
+IAKQTRWHRIAMIRKLSSEQA SGV QLQQQTR KCQEIWD
Sbjct: 1173 VIAKQTRWHRIAMIRKLSSEQATSGVKVDPTTISKYARGQRMSFLQLQQQTREKCQEIWD 1232
Query: 1074 RQVQSLSAADDDEIGSDSE-HSDLDSFAGDLENLLDA-EEFEEEESNYDTKHDKVEGVKG 1131
RQVQSLSA + DE SD E +SDLDSFAGDLENLLDA E E EES D K DK +GVKG
Sbjct: 1233 RQVQSLSAVNGDENESDLEGNSDLDSFAGDLENLLDAEECEEGEESTNDLKRDKGDGVKG 1292
Query: 1132 LKMRRRPIQVQAEEEIEDEAAEAAELCRLLMDDDEAELKKKKKKTKAQVEGGLSLAKSIS 1191
LKMRR P QAEEEIED+AAEAAELCRLLMDDDEA+ KKKKK E A+ +
Sbjct: 1293 LKMRRHPTLAQAEEEIEDDAAEAAELCRLLMDDDEADKKKKKKAKVIVGE-----ARLVP 1347
Query: 1192 GLEIVERLKKANKPAKHIAITVQPNGS-HTANEQIKDPKEEESLIAKRNLSGKVQAMKKN 1250
++ A + K I T+Q +G+ H + I D +EEE+ K++ S KV +KKN
Sbjct: 1348 KMQSKFSFDNAEQ-VKQITNTLQLDGTNHWKEDAITDLREEENFPTKKSKSLKVNKVKKN 1406
Query: 1251 NV 1252
++
Sbjct: 1407 DI 1408
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 305/589 (51%), Positives = 388/589 (65%), Gaps = 29/589 (4%)
Query: 3 GYDSGSASKDGRDEDDEEEYEDVSGGNRLLGFMFGNVDYAGDLDVDYLDEDAKEHLAAVA 62
GYDS S S+DGRDEDDEEEYE+ GNR LGFMFGNVD +GDLDVDYLDEDAKEHL+A+A
Sbjct: 2 GYDSDSPSQDGRDEDDEEEYEESGKGNRFLGFMFGNVDNSGDLDVDYLDEDAKEHLSALA 61
Query: 63 DKLGPSLTDIDVWNSQSCFQLFCSYCLLSVNSPQPPVDAVEQDYDKKAEDAVDYEDIDEQ 122
DKLGPSLTDID LS SPQ P D VEQ D KAEDAVDYEDIDE+
Sbjct: 62 DKLGPSLTDID----------------LSGKSPQTPPDVVEQGCDVKAEDAVDYEDIDEE 105
Query: 123 YEGPEIQIASEEDYLLPKKEYFAAEVSLAALKPTASPFDDENYDEDEELEKEHEEVDKET 182
Y+GPE + A+EEDYLLPKKE+F+AE S+ L+ AS FDDENYDED EKE + V+ +
Sbjct: 106 YDGPETEAANEEDYLLPKKEFFSAEASV-CLESKASVFDDENYDEDS--EKEQDFVNDDC 162
Query: 183 EDTTTILSGEQVECATAVPDGEKSPEGDPQVGSLGAEEEMTAGVKDYDEELADILKGPLD 242
+ L+GEQ E E S E + V S EE+ A V+ +EE ++ K +
Sbjct: 163 KVDNIPLAGEQKESFVDASKEESSLEHELHVDS-PQTEELDADVQKLEEESPEVPKRSM- 220
Query: 243 GQVSTPLPVLCVEDGKVILRFSEIFGIHEPLKKGKKRDQRYSTPKDKYNTMDV-SSLVEE 301
+ PLPVLCVEDG ILRFSEIFGIHEPL+KG+KR+ R+S P+D+Y ++D+ +EE
Sbjct: 221 ---AMPLPVLCVEDGVTILRFSEIFGIHEPLRKGEKREHRHSIPRDRYKSLDLIDDFIEE 277
Query: 302 DEEVYLKGSGQGFPLFKEANIFQHGIFSLNDDDSELVKFG-VEQDAATISEHDEQRKDSC 360
DEE +LKG Q L K+ + + + ND D E KFG + DA+ + D Q KDSC
Sbjct: 278 DEEEFLKGFSQSLSLTKQVCVVHNDVSESNDVDLEFPKFGFLLADASVARKDDHQSKDSC 337
Query: 361 ICSEPMKEESNVNPSVGWKSMPSPNFFPLDQHDWEENIVWDNSPAASDNSIESHEIAGAD 420
+EPMK + + S NF+PLDQ DWE+ I+W NSP S+N++ES EI+G +
Sbjct: 338 HSAEPMKGDFAEDHSRKDHPFMLANFYPLDQQDWEDEILWGNSPVPSNNNVESCEISGPE 397
Query: 421 VESALMRGIELDTGQNNFH-ERSTSPNEKDCIVNMQNSPVLSETFGSKSSSDNTSHLFTE 479
+ ++ IE+++G + E +KD V M +SPV E FGS S ++L +
Sbjct: 398 LGASGGSEIEIESGIQSIQMEPQKKLEDKDHNVLMCSSPVKVEPFGSWDSFGAKTNLISR 457
Query: 480 SRYHPQLLRLESQLDLDNHSHANGIKENVSIKLCQSDAVKRFSKHSLQNRDMMEGSWLDN 539
S +HPQLLRLES+ ++D+ S A+G + +S + QS VKRF+K QNRDMMEGSWLD
Sbjct: 458 SLFHPQLLRLESRSEVDSSSLADGREAEIS-EHNQSGQVKRFTKVISQNRDMMEGSWLDK 516
Query: 540 IIWEPVD-AVGKPKLILDLQDEQMLFEILDNKDDEHPLLHAGAMIITRS 587
IIWE +D + KPKLI DLQD+QM FE+LD+KD H LHAGAMI+TRS
Sbjct: 517 IIWEELDQPMVKPKLIFDLQDDQMHFEVLDSKDGTHLRLHAGAMILTRS 565
>gi|6714281|gb|AAF25977.1|AC017118_14 F6N18.13 [Arabidopsis thaliana]
Length = 1994
Score = 840 bits (2170), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/709 (64%), Positives = 533/709 (75%), Gaps = 53/709 (7%)
Query: 577 LHAG-----AMIITRSAKPSDFKPAESVKLFYLGKELEDHKSLADQNVRPNSLIHLIRTK 631
LH G + + ++++ DFK E+VK+FY GKEL+D KSLA QNV+PNSL+HLIRTK
Sbjct: 726 LHVGIEESVSSLRAKASRKLDFKETEAVKMFYKGKELDDEKSLAAQNVQPNSLVHLIRTK 785
Query: 632 IHLLPRAQKLPGENKSLRPPGAFKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCT 691
+HL P AQKLPGENKSLRPPGAFKKKSDLS KDGHVFLMEYCEERPL+LSNAGMGANLCT
Sbjct: 786 VHLWPWAQKLPGENKSLRPPGAFKKKSDLSTKDGHVFLMEYCEERPLMLSNAGMGANLCT 845
Query: 692 YYQKSSPGDQAGALLCSGNNCLGNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFT 751
YYQKSSP DQ G LL + ++ LGNV+ LEPGDKSPFLG+I AGCSQSS+ETNMY+AP+F
Sbjct: 846 YYQKSSPEDQRGNLLRNQSDTLGNVMILEPGDKSPFLGEIHAGCSQSSVETNMYKAPIFP 905
Query: 752 HKVATTDFLLVRSAKGKISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYR 811
++ +TD+LLVRS KGK+S+RRIDK+ VV QQEP MEVMSPGSKNLQTY +NRMLV VYR
Sbjct: 906 QRLQSTDYLLVRSPKGKLSLRRIDKIVVVGQQEPRMEVMSPGSKNLQTYLVNRMLVYVYR 965
Query: 812 EFSAAAKRGLLPCIGVDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIP 871
EF + G I DELS F NL++AII+K +K A +RD NG+ W+ K + P
Sbjct: 966 EF--FKRGGGEHPIAADELSFLFSNLTDAIIKKNMKIIACWKRDKNGQSYWTKKDSLLEP 1023
Query: 872 SEGDLRKLAYPEH----------VCSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPD 921
E +L+KL PEH VCSYESM AGLYRLKHLGIT+ TLPASIS+A++QLPD
Sbjct: 1024 PESELKKLVAPEHVNFSFGFISLVCSYESMLAGLYRLKHLGITRFTLPASISNALAQLPD 1083
Query: 922 EAIALAAASHIERELQITPWNLSSNFVACTNQ--------------DRENIERLEITGVG 967
EAIALAAASHIERELQITPWNLSSNFVACTNQ + NIERLEITGVG
Sbjct: 1084 EAIALAAASHIERELQITPWNLSSNFVACTNQVGITYLYLGVSSLPSQANIERLEITGVG 1143
Query: 968 DPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLRRLSMEAAREVLLKF 1027
DPSGRGLGFSYVRAAPKA ++ +KKKAAA RG TVTGTDADLRRLSMEAAREVL+KF
Sbjct: 1144 DPSGRGLGFSYVRAAPKAPAAAGHMKKKAAAGRGAPTVTGTDADLRRLSMEAAREVLIKF 1203
Query: 1028 NVPEEMIAKQTRWHRIAMIRKLSSEQAASGV-------------------QLQQQTRGKC 1068
NVP+E+IAKQTRWHRIAMIRKLSSEQAASGV Q+QQQ R KC
Sbjct: 1204 NVPDEIIAKQTRWHRIAMIRKLSSEQAASGVKVDPTTIGKYARGQRMSFLQMQQQAREKC 1263
Query: 1069 QEIWDRQVQSLSAADDDEIGSDSE-HSDLDSFAGDLENLLDAEEFEEEESNYDTKHDKVE 1127
QEIWDRQ+ SLSA D DE S++E +SDLDSFAGDLENLLDAEE E E + +K+DK++
Sbjct: 1264 QEIWDRQLLSLSAFDGDENESENEANSDLDSFAGDLENLLDAEEGGEGEESNISKNDKLD 1323
Query: 1128 GVKGLKMRRRPIQVQAEEEIEDEAAEAAELCRLLMDDDEAELKKKKKKTKAQVEGGLSLA 1187
GVKGLKMRRRP QV+ +EEIEDEA E AELCRLLM D++ + KKKK K + G
Sbjct: 1324 GVKGLKMRRRPSQVETDEEIEDEATEYAELCRLLMQDEDQKKKKKKMKGVGEGMGSYPPP 1383
Query: 1188 KSISGLEIVERLKKANKPAKHIAITVQPNGSHTANEQ-IKDPKEEESLI 1235
+ L+ E ++KAN K I +QP+ S NE IKD + +S+I
Sbjct: 1384 RPNIALQSGEPVRKANAMDKK-PIAIQPDASFLVNESTIKDNRNVDSII 1431
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 264/610 (43%), Positives = 367/610 (60%), Gaps = 69/610 (11%)
Query: 17 DDEEEYEDVSGGNRLLGFMFGNVDYAGDLDVDYLDE-------DAKEHLAAVADKLGPSL 69
+D++EYED S G L GF+FGNVD +GDLD DYLDE DAKEHL+A+ADKLG SL
Sbjct: 40 NDDDEYEDNSRGFNL-GFIFGNVDNSGDLDADYLDEVICFTLSDAKEHLSALADKLGSSL 98
Query: 70 TDIDVW------------NSQSCFQLFCSYCLLSVNSPQPPVDAVEQDYDKKAEDAVDYE 117
DI++ Q SY + V+ + +YD+KAEDAVDYE
Sbjct: 99 PDINLLAKSERTASDPAEQGDVVCQGRLSYAVFIVH--------LTSNYDRKAEDAVDYE 150
Query: 118 DIDEQYEGPEIQIASEEDYLLPKKEYFAAEVSLAALKPTASPFDDENYDEDEELEKEHEE 177
DIDE+Y+GPE+Q+ SEED+LLPKKEYF+ V+L +LK AS FDDE+YDE+EE E+E
Sbjct: 151 DIDEEYDGPEVQVVSEEDHLLPKKEYFSTAVALGSLKSRASVFDDEDYDEEEEQEEEQAP 210
Query: 178 VDK--ETEDTTTILSGEQVECATAVPDGEKSPEGDPQVGSLGAEEEMTAGVKDYDEELAD 235
V+K ETE ++ E +K+ E + + L E+ M +EE+ +
Sbjct: 211 VEKSLETEKREPVVLKE-----------DKALEYEEEASILDKEDHMDT-EDVQEEEVDE 258
Query: 236 ILKGPLDGQVSTPLPVLCVEDGKVILRFSEIFGIHEPLKKGKKRDQRYSTPKDKYNTMDV 295
+L+G LD + +TPLP L VEDG VIL+FSEIF IHEP +K +R+ RY T +DKY +MD+
Sbjct: 259 LLEGTLDDKGATPLPTLYVEDGMVILQFSEIFAIHEPPQKRDRRENRYVTCRDKYKSMDI 318
Query: 296 SSLVEEDEEVYLKGSGQGFPLFKEANIFQHGIFSLNDDDSELVKFGVEQDAATIS----- 350
S LVE+DEEV LK G+ ++A++ Q + + +LVK A+TI
Sbjct: 319 SELVEDDEEVLLKSHGRIDTHVEQADLIQLDVPFPIREGLQLVK------ASTIGGITPE 372
Query: 351 --EHDEQRKDSCICSEPMKEESNVNPSVGWKSMPSPNFFPLDQHDWEENIVWDNSPAASD 408
E + +DSCI E +K++ + S +S S FPLDQH+WE I+W++SP S
Sbjct: 373 SREFTKLGRDSCIMGELLKQDFIDDNSSLCQSQLSMQVFPLDQHEWERRIIWEHSPEISG 432
Query: 409 NSIESHEIAGADVESALMRGIELDTGQ---NNFHERSTSPNEKDCIVNMQNSPVLSETFG 465
NS E E G + E L++G +T Q N + R + + V S L E+FG
Sbjct: 433 NSGEIFE-PGLEPEGMLVKGTNSETEQESLNVVNSRVQVQADNNMFVPF--SANLLESFG 489
Query: 466 SKSSSDNTSHLFTESRYHPQLLRLESQLDLDNHSHAN---GIKENVSIKLCQSDAVKRFS 522
S+ S +T+ +SR+HPQLLRLESQ D +NH N G+K+ IK + DA+ RFS
Sbjct: 490 SRGSQ-STNESTNKSRHHPQLLRLESQWD-ENHLSGNDEAGVKK---IKRLEKDALGRFS 544
Query: 523 KHSLQNRDMMEGSWLDNIIWEPVDAVGKPKLILDLQDEQMLFEILDNKDDEHPLLHAGAM 582
+ L+ RD+ + +WLD+IIW+ + + KLI DLQDEQM+FEI DN++ ++ LHAGAM
Sbjct: 545 RLVLRERDLGDEAWLDSIIWDSEKELSRSKLIFDLQDEQMVFEIFDNEESKNLQLHAGAM 604
Query: 583 IITRSAKPSD 592
I++RS+K D
Sbjct: 605 IVSRSSKSKD 614
>gi|297851714|ref|XP_002893738.1| F6N18.13 [Arabidopsis lyrata subsp. lyrata]
gi|297339580|gb|EFH69997.1| F6N18.13 [Arabidopsis lyrata subsp. lyrata]
Length = 1951
Score = 837 bits (2163), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/704 (64%), Positives = 532/704 (75%), Gaps = 55/704 (7%)
Query: 577 LHAG-----AMIITRSAKPSDFKPAESVKLFYLGKELEDHKSLADQNVRPNSLIHLIRTK 631
LH G + + ++++ DFK E+VK+FY+GKELED KSLA QNV+PNSL+HLIRTK
Sbjct: 695 LHVGIEESVSSLKAKASRKLDFKETEAVKMFYMGKELEDEKSLAAQNVQPNSLVHLIRTK 754
Query: 632 IHLLPRAQKLPGENKSLRPPGAFKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCT 691
+H+ P AQKLPGENKSLRPPGAFKKKSDLS KDGHVFLMEYCEERPL+LSNAGMGANLCT
Sbjct: 755 VHMWPWAQKLPGENKSLRPPGAFKKKSDLSTKDGHVFLMEYCEERPLMLSNAGMGANLCT 814
Query: 692 YYQKSSPGDQAGALLCSGNNCLGNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFT 751
YYQK+SP DQ G LL + ++ LGNV+ LEPGDKSPFLG+I AGCSQSS+ETNMY+AP+F
Sbjct: 815 YYQKTSPEDQRGNLLRNQSDTLGNVMILEPGDKSPFLGEIHAGCSQSSVETNMYKAPIFP 874
Query: 752 HKVATTDFLLVRSAKGKISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYR 811
++ +TD+LLVRS KGK+S+RRIDK+ VV QQEP MEVMSPGSKNLQTY +NRMLV VYR
Sbjct: 875 QRLQSTDYLLVRSPKGKLSLRRIDKIVVVGQQEPRMEVMSPGSKNLQTYLVNRMLVYVYR 934
Query: 812 EFSAAAKRGLLPCIGVDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIP 871
EF G I DELS F NL++AII++ +K RD NG+ W+ K P
Sbjct: 935 EFLKRGGGG--HPIPADELSFLFSNLTDAIIKRNMK------RDKNGQSYWAKKPGLKDP 986
Query: 872 SEGDLRKLAYPEH----------VCSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPD 921
+E +L+KL PEH VCSYESM AGLYRLKHLGIT+ TLPASIS+A++QLPD
Sbjct: 987 AENELKKLVAPEHVSFSFGDISLVCSYESMLAGLYRLKHLGITRFTLPASISTALAQLPD 1046
Query: 922 EAIALAAASHIERELQITPWNLSSNFVACTNQ---------DRENIERLEITGVGDPSGR 972
EAIALAAASHIERELQITPWNLSSNFVACTNQ DR NIERLEITGVGDPSGR
Sbjct: 1047 EAIALAAASHIERELQITPWNLSSNFVACTNQVGITYLYLGDRANIERLEITGVGDPSGR 1106
Query: 973 GLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLRRLSMEAAREVLLKFNVPEE 1032
GLGFSYVRAAPKA ++ +KKKAAA RG TVTGTDADLRRLSMEAAREVL+KFNVP+E
Sbjct: 1107 GLGFSYVRAAPKAPAAAGHMKKKAAAGRGAPTVTGTDADLRRLSMEAAREVLIKFNVPDE 1166
Query: 1033 MIAKQTRWHRIAMIRKLSSEQAASGV-------------------QLQQQTRGKCQEIWD 1073
+IAKQTRWHRIAMIRKLSSEQAASGV Q+QQQ R KCQEIWD
Sbjct: 1167 IIAKQTRWHRIAMIRKLSSEQAASGVKVDPTTIGKYARGQRMSFLQMQQQAREKCQEIWD 1226
Query: 1074 RQVQSLSAADDDEIGSDSE-HSDLDSFAGDLENLLDAEEFEEEESNYDTKHDKVEGVKGL 1132
RQ+ SLSA D DE S++E +SDLDSFAGDLENLLDAEE E E + +K+DK++GVKGL
Sbjct: 1227 RQLLSLSAFDGDENESENEANSDLDSFAGDLENLLDAEEGGEGEESNMSKNDKLDGVKGL 1286
Query: 1133 KMRRRPIQVQAEEEIEDEAAEAAELCRLLMDDDEAELKKKKKKTKAQVEGGLSLAKSISG 1192
KMRRRP QV+ +EEIEDEA E AELCRLLM D++ + KKKK K + +I+
Sbjct: 1287 KMRRRPSQVETDEEIEDEATEYAELCRLLMQDEDQKKKKKKMKGVGEGMASFPPRPNIA- 1345
Query: 1193 LEIVERLKKANKPAKHIAITVQPNGSHTANEQ-IKDPKEEESLI 1235
+ E ++KAN K I +QP+ S NE IKD + +++I
Sbjct: 1346 FQTGEPVRKANAMDKK-PIAIQPDASFLINESTIKDNRNVDTII 1388
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 265/595 (44%), Positives = 368/595 (61%), Gaps = 57/595 (9%)
Query: 16 EDDEEEYEDVSGGNRLLGFMFGNVDYAGDLDVDYLDE-------DAKEHLAAVADKLGPS 68
++D+EEYED S G L GF+FGNVD +GDLD DYLDE DAKEHL+A+ADKLG S
Sbjct: 28 DNDDEEYEDNSRGFNL-GFIFGNVDNSGDLDADYLDEVICLTLSDAKEHLSALADKLGSS 86
Query: 69 LTDIDVWNSQSCFQLFCSYCLLSVNSPQPPVDAVEQDYDKKAEDAVDYEDIDEQYEGPEI 128
L DI++ L S S + Q + + +YD+KAEDAVDYEDIDE+Y+GPE+
Sbjct: 87 LPDINL--------LAKSERTASDPAEQVFIFHLTSNYDRKAEDAVDYEDIDEEYDGPEV 138
Query: 129 QIASEEDYLLPKKEYFAAEVSLAALKPTASPFDDENYDEDEELEKEHEEVDK--ETEDTT 186
Q+ SEED+LLPKKEYF+ V+L +LK AS FDDE+YDE+EE E+EH V+K ETE
Sbjct: 139 QVVSEEDHLLPKKEYFSTAVALGSLKSRASVFDDEDYDEEEEQEEEHAPVEKSFETEKRE 198
Query: 187 TILSGEQVECATAVPDGEKSPEGDPQVGSLGAEEEMTAGVKDYDEELADILKGPLDGQVS 246
++ E +K+ E + + A+E+ +EE+ ++L G LD + +
Sbjct: 199 PVVLKE-----------DKALEYEEE-----AKEDHMDTEDVQEEEVDELLDGTLDDKGA 242
Query: 247 TPLPVLCVEDGKVILRFSEIFGIHEPLKKGKKRDQRYSTPKDKYNTMDVSSLVEEDEEVY 306
TPLP L VEDG VIL+FSEIF IHEP +K +R+ RY T +DKY +MD+S LVE+DEE+
Sbjct: 243 TPLPTLYVEDGMVILQFSEIFAIHEPPQKRDRRENRYVTCRDKYISMDISELVEDDEEIL 302
Query: 307 LKGSGQGFPLFKEANIFQHGIFSLNDDDSELVKFGVEQDAATIS-EHDEQRKDSCICSEP 365
LK G+ L K+A++ Q + + +LVK A S E + +DSCI E
Sbjct: 303 LKSHGRIDTLVKQADLIQLDVPFPIREGLQLVKASTVGGIAPESREFTKLVRDSCIMGEL 362
Query: 366 MKEESNVNPSVGWKSMPSPNFFPLDQHDWEENIVWDNSPAASDNSIESHEIAGADVESAL 425
+KE+ + S +S S FPLDQH+WE I+W++SP S NS E E G + E+ L
Sbjct: 363 LKEDLIDDNSSLCQSQLSMEVFPLDQHEWEHRILWEHSPEISGNSGEVFE-RGLEPEAML 421
Query: 426 MRGIELDTGQNNFHERSTSPNEKDCIVNMQNSPV-----LSETFGSKSSSDNTSHLFTES 480
+ G +T + N + + N ++ + N PV L E+FGS+ S +S
Sbjct: 422 VEGTNAETEEENLN----AMNSREKVQADDNMPVPFSANLLESFGSRGSQST-----NKS 472
Query: 481 RYHPQLLRLESQLDLDNHSHAN---GIKENVSIKLCQSDAVKRFSKHSLQNRDMMEGSWL 537
R+HPQLLRLESQ D +NH N G+K+ IK ++DA+ RFS+ L+ RD+ +WL
Sbjct: 473 RHHPQLLRLESQWD-ENHLSENDESGVKK---IKRLENDALGRFSRLVLRERDLGNEAWL 528
Query: 538 DNIIWEPVDAVGKPKLILDLQDEQMLFEILDNKDDEHPLLHAGAMIITRSAKPSD 592
D+IIW+ + + KLI DLQD+QM+FEILDN++ ++ LHAGAMI++RS+K D
Sbjct: 529 DSIIWDSDKELSRSKLIFDLQDDQMVFEILDNEESKNLQLHAGAMIVSRSSKSKD 583
>gi|75116324|sp|Q67W65.1|TAF1_ORYSJ RecName: Full=Transcription initiation factor TFIID subunit 1;
AltName: Full=TAFII250
gi|51535532|dbj|BAD37451.1| putative HAC13 protein [Oryza sativa Japonica Group]
gi|51535630|dbj|BAD37604.1| putative HAC13 protein [Oryza sativa Japonica Group]
Length = 1810
Score = 809 bits (2089), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/613 (65%), Positives = 489/613 (79%), Gaps = 24/613 (3%)
Query: 583 IITRSAKPSDFKPAESVKLFYLGKELEDHKSLADQNVRPNSLIHLIRTKIHLLPRAQKLP 642
+ ++++K +FKP+E +KLF GKEL+D SLA QNVRPNS++H++RT+IHL P+AQ+LP
Sbjct: 661 VKSKASKKLEFKPSEKIKLFCSGKELQDDISLAMQNVRPNSILHVVRTEIHLWPKAQRLP 720
Query: 643 GENKSLRPPGAFKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQA 702
GENK LRPPGAF+KKSDLSVKDGHVFLMEYCEERPLLL+NAGM A LCTYYQK+SP DQ
Sbjct: 721 GENKPLRPPGAFRKKSDLSVKDGHVFLMEYCEERPLLLANAGMAARLCTYYQKTSPSDQT 780
Query: 703 GALLCSGNNCLGNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLV 762
L S ++ LG +L ++P DKSPFLG+I++G QS LETNMYRAPVF HKVATTD+LLV
Sbjct: 781 ATSLRSNSDGLGTMLAIDPADKSPFLGNIRSGSHQSCLETNMYRAPVFPHKVATTDYLLV 840
Query: 763 RSAKGKISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLL 822
RS KG +S+RRIDK+ V QQEP MEV SPG+KN+Q Y +NR+LV VYREF A K G++
Sbjct: 841 RSPKGMLSLRRIDKLYAVGQQEPHMEVFSPGTKNMQNYILNRILVYVYREFRAREKPGII 900
Query: 823 PCIGVDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYP 882
P I DEL +Q P ++EAI+RK+LK CA LR+ G + + F IPSE +LR+L P
Sbjct: 901 PQIRADELPIQ-PPITEAIVRKRLKHCADLRKGPKGHLFYIQRPDFRIPSEEELRRLLTP 959
Query: 883 EHVCSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWN 942
E+VC YESMQAG YRLKHLGI +LT P ++SAM+QLPDEAI LAAA+HIERELQIT WN
Sbjct: 960 ENVCCYESMQAGQYRLKHLGIEKLTQPVGLASAMNQLPDEAIELAAAAHIERELQITSWN 1019
Query: 943 LSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGG 1002
L+SNFVACTNQD+ENIERLEITGVGDPSGRGLGFSYVR PKA VS++ KKK+AA + G
Sbjct: 1020 LTSNFVACTNQDKENIERLEITGVGDPSGRGLGFSYVRVTPKAPVSNSTHKKKSAAAK-G 1078
Query: 1003 STVTGTDADLRRLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASGV---- 1058
+TVTGTDADLRRLSM+AARE+LLKF VPEE I K TRWHRIAM+RKLSSEQAASGV
Sbjct: 1079 TTVTGTDADLRRLSMDAARELLLKFGVPEEQIDKLTRWHRIAMVRKLSSEQAASGVTMDE 1138
Query: 1059 ---------------QLQQQTRGKCQEIWDRQVQSLSAADDDEIGSDSE-HSDLDSFAGD 1102
QLQQQT+ KCQEIWDRQ+QSLSA D +E GSD+E +SDLDSFAGD
Sbjct: 1139 IPVSKFARGQRMSFLQLQQQTKEKCQEIWDRQIQSLSAMDGNENGSDTEANSDLDSFAGD 1198
Query: 1103 LENLLDAEEFEEEE-SNYDTKHDKVEGVKGLKMRRRPIQVQAEEEIEDEAAEAAELCRLL 1161
LENLLDAEEF++E+ N D + DK++G++GLKMRR Q Q EEI+D+ AEAA L L
Sbjct: 1199 LENLLDAEEFDDEDVGNTDIRSDKMDGMRGLKMRRCHTQSQINEEIQDDVAEAA-LVEKL 1257
Query: 1162 MDDDEAELKKKKK 1174
+++ ++++K+KK+
Sbjct: 1258 LEESDSDMKRKKQ 1270
Score = 323 bits (829), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 225/581 (38%), Positives = 317/581 (54%), Gaps = 91/581 (15%)
Query: 27 GGNRLLGFMFGNVDYAGDLDVDYLDEDAKEHLAAVADKLGPSLTDIDVWNSQSCFQLFCS 86
GGN LGFMFGNVD +GDLD DYLDEDAKEHL A+ADKLGPSL DID+ +
Sbjct: 30 GGNHFLGFMFGNVDDSGDLDADYLDEDAKEHLFALADKLGPSLKDIDLIKPSAA------ 83
Query: 87 YCLLSVNSPQPPVDAVEQDYDKKAEDAVDYEDIDEQYEGPEIQIASEEDYLLPKKEYFAA 146
P D EQDYD KAEDAVDYEDIDE+Y+GPE++ A+EED+LL KK+YF++
Sbjct: 84 -----------PTDPSEQDYDAKAEDAVDYEDIDEEYDGPEVEAATEEDHLLSKKDYFSS 132
Query: 147 EVSLAALKPTASPFDDENYDEDEELEKEHEEVDKETEDTTTILSGEQVECATAVPDGEKS 206
A++ S FD+ENYDEDEE +++ T S EQ++ A
Sbjct: 133 NAVYASVNSKVSVFDEENYDEDEEPPNDNDLPSDNIVQNCTSASAEQLDMA--------- 183
Query: 207 PEGD----PQVGSLGAEEEMTAGVKDYDEELADILKGPLDGQVSTPLPVLCVEDGKVILR 262
P D ++ S +E E + + + +E+ + + L+ + +T LPVLC+EDG VIL+
Sbjct: 184 PSNDNLAVEKMSSSLSEPEESFESEAFQKEM--VAEEQLESKTATSLPVLCIEDGSVILK 241
Query: 263 FSEIFGIHEPLKKGKKRDQRYSTPKDK-YNTMDVSSLVEEDEEVYLKGSGQGFPLFKEAN 321
FSEIFG EP++K K R+ P +K + + +VEEDEEV+L+ + Q K
Sbjct: 242 FSEIFGAQEPVRKAKM--DRHKRPVNKELQITNFTDIVEEDEEVFLRSTIQNLSALKHIK 299
Query: 322 IFQHGIFSLNDDDSELVKFGVEQDAATISEHDEQRKDSCICSEPMKEESNVNPSVGWKSM 381
+ + S +D+ + V + KDSC+ +PMK++ + +S
Sbjct: 300 TNDNFVESDSDESTSDVALRL--------------KDSCLSEQPMKDK---DIPTAVQSP 342
Query: 382 PSPNFFPLDQHDWEENIVWDNSP-----------AASDNSIESHEIAGADVESALMRGIE 430
P+F+PL+ +WE +IVW NSP A S S++ H D + G
Sbjct: 343 VFPDFYPLEHENWENDIVWGNSPTTAIQPCLTSCAISKESLDDH---NEDQAEGYVSGC- 398
Query: 431 LDTGQNNFHERSTSPNEKDCIVNMQNSPVLSETFGSKSSSDNTSHLFTESRYHPQLLRLE 490
D QN FH +S V+++ FG D+TS+ E+ Y P LR E
Sbjct: 399 WDV-QNKFH----------------SSSVMADPFGHTEIPDSTSYRSPENSYSP--LRKE 439
Query: 491 SQLDLDNHSHANGIKENVSIKLCQSDAVKRFSKHSLQNRDMMEGSWLDNIIWEPVDAVGK 550
+ + ++ N I + V I D + +K SL N++++EGSWLDNI+W+P + V K
Sbjct: 440 TAQENNSLDEPNNITQPVKI-----DTTRHLNKLSLLNKELLEGSWLDNIVWDPSEDVPK 494
Query: 551 PKLILDLQDEQMLFEILDNKDDEHPLLHAGAMIITRSAKPS 591
PKLI DL+D+ MLFEILD K+ +H HA AMI+TR K S
Sbjct: 495 PKLIFDLKDDHMLFEILDEKNGDHLRSHARAMIVTRPMKTS 535
>gi|242096508|ref|XP_002438744.1| hypothetical protein SORBIDRAFT_10g025390 [Sorghum bicolor]
gi|241916967|gb|EER90111.1| hypothetical protein SORBIDRAFT_10g025390 [Sorghum bicolor]
Length = 1804
Score = 800 bits (2066), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/613 (65%), Positives = 484/613 (78%), Gaps = 24/613 (3%)
Query: 583 IITRSAKPSDFKPAESVKLFYLGKELEDHKSLADQNVRPNSLIHLIRTKIHLLPRAQKLP 642
I +++K + KP+E + LF GKEL+D SLA QNVRPNS++H++RT+++L P+AQKLP
Sbjct: 664 IKLKASKKFELKPSEKITLFCSGKELQDDISLAMQNVRPNSIVHVVRTEVYLWPKAQKLP 723
Query: 643 GENKSLRPPGAFKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQA 702
GE+K LRPPGAF+KK+DLSVKDGHVFLMEYCEERPLLLSNAGMGA LCTYYQK+SP DQA
Sbjct: 724 GEDKPLRPPGAFRKKTDLSVKDGHVFLMEYCEERPLLLSNAGMGARLCTYYQKTSPTDQA 783
Query: 703 GALLCSGNNCLGNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLV 762
A L + ++ LG VL ++P DKSPFLGDI +G QS LETNMYR+PVF HKVA TD+LLV
Sbjct: 784 AASLRNNSDGLGTVLAIDPSDKSPFLGDIHSGSHQSCLETNMYRSPVFPHKVAPTDYLLV 843
Query: 763 RSAKGKISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLL 822
RSAKG +S+RRIDK+ V QQEP MEV SPG+KN QTY +NR+L VYREF A + +
Sbjct: 844 RSAKGALSLRRIDKLYAVGQQEPHMEVFSPGTKNAQTYLLNRVLAYVYREFRARERPDGI 903
Query: 823 PCIGVDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYP 882
P I DEL +Q P L+EAI++K+LK CA L++ G W+ + F +PSE +LR+L P
Sbjct: 904 PQIRADELPIQSP-LTEAIVKKRLKHCADLKKGPKGHFFWTQRPDFRVPSEEELRRLLTP 962
Query: 883 EHVCSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWN 942
E VC YESMQAGLYRLK LGI +LT P ++SAM+QLPDEAI LAAASHIERELQIT WN
Sbjct: 963 ESVCCYESMQAGLYRLKRLGILKLTQPVGLASAMNQLPDEAIELAAASHIERELQITSWN 1022
Query: 943 LSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGG 1002
L+SNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVR APKA S++++KKK+AA + G
Sbjct: 1023 LTSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRVAPKAPASNSVLKKKSAAAK-G 1081
Query: 1003 STVTGTDADLRRLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASGV---- 1058
+TVTGTDADLRRLSM+AARE+LLKF VPEE I K TRWHRIAM+RKLSSEQAASG+
Sbjct: 1082 TTVTGTDADLRRLSMDAARELLLKFGVPEEQIDKLTRWHRIAMVRKLSSEQAASGITIDE 1141
Query: 1059 ---------------QLQQQTRGKCQEIWDRQVQSLSAADDDEIGSDSE-HSDLDSFAGD 1102
QLQQQTR KCQEIWDRQVQSLSA D D+ GSD+E +SDLDSFAGD
Sbjct: 1142 IPVSKFARGQRMSFLQLQQQTREKCQEIWDRQVQSLSAIDGDDNGSDTEANSDLDSFAGD 1201
Query: 1103 LENLLDAEEFEEEE-SNYDTKHDKVEGVKGLKMRRRPIQVQAEEEIEDEAAEAAELCRLL 1161
LENLLDAEEF++E+ S D + DK +G++GLKMRR Q EEIED+ EA+ L + L
Sbjct: 1202 LENLLDAEEFDDEDTSTADLRIDKADGMRGLKMRRCSTHAQINEEIEDDETEAS-LAKKL 1260
Query: 1162 MDDDEAELKKKKK 1174
++DD ++K+KK+
Sbjct: 1261 LEDDGNDVKRKKQ 1273
Score = 319 bits (818), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 233/578 (40%), Positives = 320/578 (55%), Gaps = 82/578 (14%)
Query: 27 GGNRLLGFMFGNVDYAGDLDVDYLDEDAKEHLAAVADKLGPSLTDIDVWNSQSCFQLFCS 86
GGN LGFMFGNVD +GDLD DYLDEDAKEHL A+ADKLGPSL DID+
Sbjct: 30 GGNHFLGFMFGNVDDSGDLDADYLDEDAKEHLFALADKLGPSLKDIDL------------ 77
Query: 87 YCLLSVNSPQPPVDAVEQDYDKKAEDAVDYEDIDEQYEGPEIQIASEEDYLLPKKEYFAA 146
+ S P D EQDYD+KAEDAVDYEDIDE+Y+GPE++ A+EED +L KK+YF++
Sbjct: 78 -----IKSSPAPTDPSEQDYDEKAEDAVDYEDIDEEYDGPEVEAATEEDNVLSKKDYFSS 132
Query: 147 EVSLAALKPTASPFDDENYDEDEELEKEHEEV--DKETEDTTTILSGEQVECATAVPDGE 204
A++ T S FDDENYDE+EE E EE D ++ +++ S EQ + AT+ +
Sbjct: 133 STVYASVNSTVSVFDDENYDEEEEPPSEKEEPPGDSAAQNLSSV-SIEQADMATSSDNLA 191
Query: 205 KSPEGDPQVGSLG-AEEEMTAGVKDYDEELADILKGPLDGQVSTPLPVLCVEDGKVILRF 263
++G L EE M +D + E +G L + +T LPVLC+EDG ILRF
Sbjct: 192 TE-----KLGLLSHPEESMDFEYEDLENEKG-TGEGHLAPESATSLPVLCIEDGNAILRF 245
Query: 264 SEIFGIHEPLKKGKKRDQRYSTPKDKYNTMDVSSLVEEDEEVYLKGSGQGFPLFKEANIF 323
SEIFGI EP++K K + K+ + T +V+ VEEDEE+ L+ + Q F K +
Sbjct: 246 SEIFGIQEPVRKVKTDHHKRPVNKELHIT-NVADNVEEDEELILRSTIQNFSTLKHNQMN 304
Query: 324 QHGIFSLNDDDSELVKFGVEQDAATISEHDEQRKDSCICSEPMKEESNVNPSVGWKSMPS 383
+ + S +D+ +IS+ + KDSC+ +PMK+ +V +S
Sbjct: 305 EDFVESDSDE--------------SISDVTLRLKDSCLSEQPMKDAHKDIRTV-QRSPIC 349
Query: 384 PNFFPLDQHDWEENIVWDNSPAA----------SDNSIESHEIAGADVESALMRGIELDT 433
P+F+PL+ DWE +I+W+NSPA S+ S+++H G D +G +
Sbjct: 350 PDFYPLEHDDWENDIIWNNSPATDQQPYAKICESEESVDTH---GED------QGKDYGQ 400
Query: 434 GQNNFHERSTSPNEKDCIVNMQNSPVLSETFGSKSSSDNTSHLFTESRYHPQLLRLESQL 493
+ RS S SPV+ ETFG ++ + P L E L
Sbjct: 401 VSRCWDVRSKS----------NGSPVIEETFGCTEMPAPANYCSPGKSFPP--LTNEDNL 448
Query: 494 DLDNHSHANGIKENVSIKLCQSDAVKRFSKHSLQNRDMMEGSWLDNIIWEPVDAVGKPKL 553
D H N + + V I D R + SL NR+++EGSWLDNIIW+P + KPKL
Sbjct: 449 D---HITPNNLDDAVKI-----DTTMRLNNLSLLNRELLEGSWLDNIIWDPNEVTPKPKL 500
Query: 554 ILDLQDEQMLFEILDNKDDEHPLLHAGAMIITRSAKPS 591
I DL+D+ MLFEILD K+ H HA AMI+++S K S
Sbjct: 501 IFDLKDDHMLFEILDEKNVGHIRSHARAMIVSQSTKTS 538
>gi|357117175|ref|XP_003560349.1| PREDICTED: transcription initiation factor TFIID subunit 1-like
[Brachypodium distachyon]
Length = 1830
Score = 791 bits (2044), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/700 (58%), Positives = 516/700 (73%), Gaps = 31/700 (4%)
Query: 583 IITRSAKPSDFKPAESVKLFYLGKELEDHKSLADQNVRPNSLIHLIRTKIHLLPRAQKLP 642
+ ++++K +F+P+E +KLF GKEL+D SLA QNVRP S++H++RT++HL P+AQKLP
Sbjct: 687 VKSKASKKLEFRPSEKIKLFGSGKELQDDISLAMQNVRPKSILHVVRTEVHLWPKAQKLP 746
Query: 643 GENKSLRPPGAFKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQA 702
GE+K LRPPGAF+K++DLSVKDGHVFLMEYCEERPLLL+NAGMGA LCTYYQK+SP DQ
Sbjct: 747 GEDKPLRPPGAFRKRTDLSVKDGHVFLMEYCEERPLLLANAGMGARLCTYYQKTSPTDQT 806
Query: 703 GALLCSGNNCLGNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLV 762
L S ++ LG VL +EP DKSPFLGDI++G QS LETNMYRAP F HKVA+TD+LLV
Sbjct: 807 ATSLRSNSDGLGTVLAIEPADKSPFLGDIRSGSHQSCLETNMYRAPTFPHKVASTDYLLV 866
Query: 763 RSAKGKISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLL 822
RS KG +S+RRIDK+ V QQEP MEV SPG+KN+Q Y +NR+LV VYREF G+
Sbjct: 867 RSPKGMLSLRRIDKLYAVGQQEPHMEVFSPGTKNMQNYLLNRILVYVYREFRVREMPGVP 926
Query: 823 PCIGVDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYP 882
I DEL +Q P L+EAI++K+LK CA L++ +G +W + F IPSE +LR+L P
Sbjct: 927 SQIRGDELPIQ-PPLTEAIVKKRLKHCADLKKLPSGHTIWIQRPDFRIPSEEELRRLLTP 985
Query: 883 EHVCSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWN 942
E VC +ESMQAG +RLK LGI +LT P ++SAM+QLPDEAI LAAA+HIERELQIT WN
Sbjct: 986 EMVCCHESMQAGQHRLKRLGIEKLTQPVGLASAMNQLPDEAIELAAAAHIERELQITSWN 1045
Query: 943 LSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGG 1002
L+SNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVR PKA VS++ KKK+AA + G
Sbjct: 1046 LTSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRVTPKAPVSNSSHKKKSAAAK-G 1104
Query: 1003 STVTGTDADLRRLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASGV---- 1058
+TVTGTDADLRRLSM+AARE+LLKF VP+E I K TRWHRIAM+RKLSSEQAASG+
Sbjct: 1105 TTVTGTDADLRRLSMDAARELLLKFGVPDEQIDKLTRWHRIAMVRKLSSEQAASGITIDE 1164
Query: 1059 ---------------QLQQQTRGKCQEIWDRQVQSLSAADDDEIGSDSE-HSDLDSFAGD 1102
QLQQQT+ KCQEIWDRQ+QSLSA + D+ GSD+E HSDLDSFAGD
Sbjct: 1165 IPVSKFARGQRMSFLQLQQQTKEKCQEIWDRQIQSLSAIEGDDNGSDTEAHSDLDSFAGD 1224
Query: 1103 LENLLDAEEFEEEES-NYDTKHDKVEGVKGLKMRRRPIQVQAEEEIEDEAAEAAELCRLL 1161
LENLLDAEEF++E++ D + DK +G++GLKMRR P Q Q+ EEI+D+ AEAA + +LL
Sbjct: 1225 LENLLDAEEFDDEDAGTADMRSDKADGMRGLKMRRCPTQAQSNEEIQDDEAEAALVKKLL 1284
Query: 1162 MDDDEAELKKKKKKTKAQVEGGLSLAKSISGLEIVERLKKANKPAKHIAITVQPN-GSHT 1220
+D K+KK++ G S+ + + + K + +++ + P G+
Sbjct: 1285 --EDSGNDPKRKKQSVDLANYGTSMYNQGANKTKQGKAGQMIKSSGYVSALLTPKEGTPR 1342
Query: 1221 ANEQIKDPKEEESLIAKRNLSGKVQA-----MKKNNVQGE 1255
++I+D E L +K V A +KK NV G+
Sbjct: 1343 GGKEIEDSFTEGGLPSKLKTKQMVDANDIILVKKKNVLGK 1382
Score = 316 bits (810), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 226/584 (38%), Positives = 316/584 (54%), Gaps = 71/584 (12%)
Query: 27 GGNRLLGFMFGNVDYAGDLDVDYLDEDAKEHLAAVADKLGPSLTDIDVWNSQSCFQLFCS 86
GGN LGFMFGNVD +GDLD DYLDEDAKEHL A+ADKLGPSL DID
Sbjct: 30 GGNHFLGFMFGNVDDSGDLDADYLDEDAKEHLFALADKLGPSLKDID------------- 76
Query: 87 YCLLSVNSPQPPVDAVEQDYDKKAEDAVDYEDIDEQYEGPEIQIASEEDYLLPKKEYFAA 146
L+ +SP PVD EQDYD+KA+DAVDYEDIDE+Y+GPE++ A+EED+LL KK+YF++
Sbjct: 77 ---LTKSSPA-PVDPSEQDYDEKADDAVDYEDIDEEYDGPEVEAATEEDHLLSKKDYFSS 132
Query: 147 EVSLAALKPTASPFDDENYDEDEELEKEHEEVDKE---TEDTTTILSGEQVECATAVPDG 203
A++ AS FD+ENYDEDEE + E + ++ ++ E + P
Sbjct: 133 NTVFASVNTKASVFDEENYDEDEEPPNDEEPTNNNELPSDSKASVFDEENYDEDEEPPKK 192
Query: 204 EKSPE--------GDPQV----GSLGAEEEMTAGVKDYDEELADILKGPLDGQVSTPLPV 251
S E G P GSL E + ++ D + L+ + +T LPV
Sbjct: 193 HSSVEQLDMSPSNGIPTTEMMSGSLSPRGESMDIEYEVCQDEVDTEEDQLESKSATSLPV 252
Query: 252 LCVEDGKVILRFSEIFGIHEPLKKGKKRDQRYSTPKDKYNTMDVSSLVEEDEEVYLKGSG 311
LC+EDG VIL+FSEIFGI EP++K K + K+ + T D+ VE+DEEV+L+ +
Sbjct: 253 LCIEDGSVILKFSEIFGIQEPVRKPKTDHHKRPVSKEIHITSDI---VEDDEEVFLRSTI 309
Query: 312 QGFPLFKEANIFQHGIFSLNDDDSELVKFGVEQDAATISEHDEQRKDSCICSEPMKEESN 371
Q K + + + S +DD F + KDSC+ +PMK+
Sbjct: 310 QDLSYLKHIKMNEDVVESDSDDLISSDTFRL--------------KDSCLSEQPMKDAYI 355
Query: 372 VNPSVGWKSMPSPNFFPLDQHDWEENIVWDNSPAASDNSIESHEIAGADVESALMRGIEL 431
PS +S P+F+PL+ DWE I+W NSPA I I
Sbjct: 356 DFPS-AQQSPVCPDFYPLEHEDWENGIIWGNSPANEGRHCLKSSI------------ISE 402
Query: 432 DTGQNNFHERSTSPNEKDCIVNMQ----NSPVLSETFGSKSSSDNTSHLFTESRYHPQLL 487
++G E++ ++Q +SP+++E FG + S+ E+ Y LL
Sbjct: 403 ESGDTQEEEQAKDYGYVSGCYDVQSKNNDSPLITEPFGCTEMPASASYHSPENSY--PLL 460
Query: 488 RLESQLDLDNHSHANGIKENVSIKLCQSDAVKRFSKHSLQNRDMMEGSWLDNIIWEPVDA 547
R E+ L+ +N N + K+ + +K + SL N++++EGSWLDNIIW+P +
Sbjct: 461 RKETPLEKNNLDEIEPNNINGTAKI---NTMKCLNNLSLLNKELLEGSWLDNIIWDPTED 517
Query: 548 VGKPKLILDLQDEQMLFEILDNKDDEHPLLHAGAMIITRSAKPS 591
KPKLI DL+D+QMLFEILD K+ +H HA AMI++R K S
Sbjct: 518 TPKPKLIFDLKDDQMLFEILDEKNGDHLRSHARAMIVSRPMKAS 561
>gi|222635980|gb|EEE66112.1| hypothetical protein OsJ_22148 [Oryza sativa Japonica Group]
Length = 1804
Score = 776 bits (2004), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/619 (63%), Positives = 479/619 (77%), Gaps = 42/619 (6%)
Query: 583 IITRSAKPSDFKPAESVKLFYLGKELEDHKSLADQNVRPNSLIHLIRTKIHLLPRAQKLP 642
+ ++++K +FKP+E +KLF GKEL+D SLA QNVRPNS++H++RT+IHL P+AQ+LP
Sbjct: 661 VKSKASKKLEFKPSEKIKLFCSGKELQDDISLAMQNVRPNSILHVVRTEIHLWPKAQRLP 720
Query: 643 GENKSLRPPGAFKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQA 702
GENK LRPPGAF+KKSDLSVKDGHVFLMEYCEERPLLL+NAGM A LCTYYQK+SP DQ
Sbjct: 721 GENKPLRPPGAFRKKSDLSVKDGHVFLMEYCEERPLLLANAGMAARLCTYYQKTSPSDQT 780
Query: 703 GALLCSGNNCLGNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLV 762
L S ++ LG +L ++P DKSPFLG+I++G QS LETNMYRAPVF HKVATTD+LLV
Sbjct: 781 ATSLRSNSDGLGTMLAIDPADKSPFLGNIRSGSHQSCLETNMYRAPVFPHKVATTDYLLV 840
Query: 763 RSAKGKISIRRIDKVAVVAQ------QEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAA 816
RS KG +S+RRIDK+ V Q QEP MEV SPG+KN+Q Y +NR+LV VYREF A
Sbjct: 841 RSPKGMLSLRRIDKLYAVGQQILFSWQEPHMEVFSPGTKNMQNYILNRILVYVYREFRAR 900
Query: 817 AKRGLLPCIGVDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDL 876
K G++P I DEL +Q P ++EAI + G + + F IPSE +L
Sbjct: 901 EKPGIIPQIRADELPIQ-PPITEAI------------KGPKGHLFYIQRPDFRIPSEEEL 947
Query: 877 RKLAYPEHVCSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIEREL 936
R+L PE+VC YESMQAG YRLKHLGI +LT P ++SAM+QLPDEAI LAAA+HIEREL
Sbjct: 948 RRLLTPENVCCYESMQAGQYRLKHLGIEKLTQPVGLASAMNQLPDEAIELAAAAHIEREL 1007
Query: 937 QITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKA 996
QIT WNL+SNFVACTNQD+ENIERLEITGVGDPSGRGLGFSYVR PKA VS++ KKK+
Sbjct: 1008 QITSWNLTSNFVACTNQDKENIERLEITGVGDPSGRGLGFSYVRVTPKAPVSNSTHKKKS 1067
Query: 997 AANRGGSTVTGTDADLRRLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAAS 1056
AA + G+TVTGTDADLRRLSM+AARE+LLKF VPEE I K TRWHRIAM+RKLSSEQAAS
Sbjct: 1068 AAAK-GTTVTGTDADLRRLSMDAARELLLKFGVPEEQIDKLTRWHRIAMVRKLSSEQAAS 1126
Query: 1057 GV-------------------QLQQQTRGKCQEIWDRQVQSLSAADDDEIGSDSE-HSDL 1096
GV QLQQQT+ KCQEIWDRQ+QSLSA D +E GSD+E +SDL
Sbjct: 1127 GVTMDEIPVSKFARGQRMSFLQLQQQTKEKCQEIWDRQIQSLSAMDGNENGSDTEANSDL 1186
Query: 1097 DSFAGDLENLLDAEEFEEEE-SNYDTKHDKVEGVKGLKMRRRPIQVQAEEEIEDEAAEAA 1155
DSFAGDLENLLDAEEF++E+ N D + DK++G++GLKMRR Q Q EEI+D+ AEAA
Sbjct: 1187 DSFAGDLENLLDAEEFDDEDVGNTDIRSDKMDGMRGLKMRRCHTQSQINEEIQDDVAEAA 1246
Query: 1156 ELCRLLMDDDEAELKKKKK 1174
L L+++ ++++K+KK+
Sbjct: 1247 -LVEKLLEESDSDMKRKKQ 1264
Score = 323 bits (829), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 225/581 (38%), Positives = 317/581 (54%), Gaps = 91/581 (15%)
Query: 27 GGNRLLGFMFGNVDYAGDLDVDYLDEDAKEHLAAVADKLGPSLTDIDVWNSQSCFQLFCS 86
GGN LGFMFGNVD +GDLD DYLDEDAKEHL A+ADKLGPSL DID+ +
Sbjct: 30 GGNHFLGFMFGNVDDSGDLDADYLDEDAKEHLFALADKLGPSLKDIDLIKPSAA------ 83
Query: 87 YCLLSVNSPQPPVDAVEQDYDKKAEDAVDYEDIDEQYEGPEIQIASEEDYLLPKKEYFAA 146
P D EQDYD KAEDAVDYEDIDE+Y+GPE++ A+EED+LL KK+YF++
Sbjct: 84 -----------PTDPSEQDYDAKAEDAVDYEDIDEEYDGPEVEAATEEDHLLSKKDYFSS 132
Query: 147 EVSLAALKPTASPFDDENYDEDEELEKEHEEVDKETEDTTTILSGEQVECATAVPDGEKS 206
A++ S FD+ENYDEDEE +++ T S EQ++ A
Sbjct: 133 NAVYASVNSKVSVFDEENYDEDEEPPNDNDLPSDNIVQNCTSASAEQLDMA--------- 183
Query: 207 PEGD----PQVGSLGAEEEMTAGVKDYDEELADILKGPLDGQVSTPLPVLCVEDGKVILR 262
P D ++ S +E E + + + +E+ + + L+ + +T LPVLC+EDG VIL+
Sbjct: 184 PSNDNLAVEKMSSSLSEPEESFESEAFQKEM--VAEEQLESKTATSLPVLCIEDGSVILK 241
Query: 263 FSEIFGIHEPLKKGKKRDQRYSTPKDK-YNTMDVSSLVEEDEEVYLKGSGQGFPLFKEAN 321
FSEIFG EP++K K R+ P +K + + +VEEDEEV+L+ + Q K
Sbjct: 242 FSEIFGAQEPVRKAKM--DRHKRPVNKELQITNFTDIVEEDEEVFLRSTIQNLSALKHIK 299
Query: 322 IFQHGIFSLNDDDSELVKFGVEQDAATISEHDEQRKDSCICSEPMKEESNVNPSVGWKSM 381
+ + S +D+ + V + KDSC+ +PMK++ + +S
Sbjct: 300 TNDNFVESDSDESTSDVALRL--------------KDSCLSEQPMKDK---DIPTAVQSP 342
Query: 382 PSPNFFPLDQHDWEENIVWDNSP-----------AASDNSIESHEIAGADVESALMRGIE 430
P+F+PL+ +WE +IVW NSP A S S++ H D + G
Sbjct: 343 VFPDFYPLEHENWENDIVWGNSPTTAIQPCLTSCAISKESLDDH---NEDQAEGYVSGC- 398
Query: 431 LDTGQNNFHERSTSPNEKDCIVNMQNSPVLSETFGSKSSSDNTSHLFTESRYHPQLLRLE 490
D QN FH +S V+++ FG D+TS+ E+ Y P LR E
Sbjct: 399 WDV-QNKFH----------------SSSVMADPFGHTEIPDSTSYRSPENSYSP--LRKE 439
Query: 491 SQLDLDNHSHANGIKENVSIKLCQSDAVKRFSKHSLQNRDMMEGSWLDNIIWEPVDAVGK 550
+ + ++ N I + V I D + +K SL N++++EGSWLDNI+W+P + V K
Sbjct: 440 TAQENNSLDEPNNITQPVKI-----DTTRHLNKLSLLNKELLEGSWLDNIVWDPSEDVPK 494
Query: 551 PKLILDLQDEQMLFEILDNKDDEHPLLHAGAMIITRSAKPS 591
PKLI DL+D+ MLFEILD K+ +H HA AMI+TR K S
Sbjct: 495 PKLIFDLKDDHMLFEILDEKNGDHLRSHARAMIVTRPMKTS 535
>gi|218198646|gb|EEC81073.1| hypothetical protein OsI_23891 [Oryza sativa Indica Group]
Length = 1773
Score = 775 bits (2001), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/619 (63%), Positives = 479/619 (77%), Gaps = 42/619 (6%)
Query: 583 IITRSAKPSDFKPAESVKLFYLGKELEDHKSLADQNVRPNSLIHLIRTKIHLLPRAQKLP 642
+ ++++K +FKP+E +KLF GKEL+D SLA QNVRPNS++H++RT+IHL P+AQ+LP
Sbjct: 661 VKSKASKKLEFKPSEKIKLFCSGKELQDDISLAMQNVRPNSVLHVVRTEIHLWPKAQRLP 720
Query: 643 GENKSLRPPGAFKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQA 702
GENK LRPPGAF+KKSDLSVKDGHVFLMEYCEERPLLL+NAGM A LCTYYQK+SP DQ
Sbjct: 721 GENKPLRPPGAFRKKSDLSVKDGHVFLMEYCEERPLLLANAGMAARLCTYYQKTSPSDQT 780
Query: 703 GALLCSGNNCLGNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLV 762
L S ++ LG +L ++P DKSPFLG+I++G QS LETNMYRAPVF HKVATTD+LLV
Sbjct: 781 ATSLRSNSDGLGTMLAIDPADKSPFLGNIRSGSHQSCLETNMYRAPVFPHKVATTDYLLV 840
Query: 763 RSAKGKISIRRIDKVAVVAQ------QEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAA 816
RS KG +S+RRIDK+ V Q QEP MEV SPG+KN+Q Y +NR+LV VYREF A
Sbjct: 841 RSPKGMLSLRRIDKLYAVGQQILFSWQEPHMEVFSPGTKNMQNYILNRILVYVYREFRAR 900
Query: 817 AKRGLLPCIGVDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDL 876
K G++P I DEL +Q P ++EAI + G + + F IPSE +L
Sbjct: 901 EKPGIIPQIRADELPIQ-PPITEAI------------KGPKGHLFYIQRPDFRIPSEEEL 947
Query: 877 RKLAYPEHVCSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIEREL 936
R+L PE+VC YESMQAG YRLKHLGI +LT P ++SAM+QLPDEAI LAAA+HIEREL
Sbjct: 948 RRLLTPENVCCYESMQAGQYRLKHLGIEKLTQPVGLASAMNQLPDEAIELAAAAHIEREL 1007
Query: 937 QITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKA 996
QIT WNL+SNFVACTNQD+ENIERLEITGVGDPSGRGLGFSYVR PKA VS++ KKK+
Sbjct: 1008 QITSWNLTSNFVACTNQDKENIERLEITGVGDPSGRGLGFSYVRVTPKAPVSNSTHKKKS 1067
Query: 997 AANRGGSTVTGTDADLRRLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAAS 1056
AA + G+TVTGTDADLRRLSM+AARE+LLKF VPEE I K TRWHRIAM+RKLSSEQAAS
Sbjct: 1068 AAAK-GTTVTGTDADLRRLSMDAARELLLKFGVPEEQIDKLTRWHRIAMVRKLSSEQAAS 1126
Query: 1057 GV-------------------QLQQQTRGKCQEIWDRQVQSLSAADDDEIGSDSE-HSDL 1096
GV QLQQQT+ KCQEIWDRQ+QSLSA D +E GSD+E +SDL
Sbjct: 1127 GVTMDEIPVSKFARGQRMSFLQLQQQTKEKCQEIWDRQIQSLSAMDGNENGSDTEANSDL 1186
Query: 1097 DSFAGDLENLLDAEEFEEEE-SNYDTKHDKVEGVKGLKMRRRPIQVQAEEEIEDEAAEAA 1155
DSFAGDLENLLDAEEF++E+ N D + DK++G++GLKMRR Q Q EEI+D+ AEAA
Sbjct: 1187 DSFAGDLENLLDAEEFDDEDVGNTDIRSDKMDGMRGLKMRRCHTQAQINEEIQDDVAEAA 1246
Query: 1156 ELCRLLMDDDEAELKKKKK 1174
L L+++ ++++K+KK+
Sbjct: 1247 -LVEKLLEESDSDMKRKKQ 1264
Score = 323 bits (827), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 225/581 (38%), Positives = 317/581 (54%), Gaps = 91/581 (15%)
Query: 27 GGNRLLGFMFGNVDYAGDLDVDYLDEDAKEHLAAVADKLGPSLTDIDVWNSQSCFQLFCS 86
GGN LGFMFGNVD +GDLD DYLDEDAKEHL A+ADKLGPSL DID+ +
Sbjct: 30 GGNHFLGFMFGNVDDSGDLDADYLDEDAKEHLFALADKLGPSLKDIDLIKPSAA------ 83
Query: 87 YCLLSVNSPQPPVDAVEQDYDKKAEDAVDYEDIDEQYEGPEIQIASEEDYLLPKKEYFAA 146
P D EQDYD KAEDAVDYEDIDE+Y+GPE++ A+EED+LL KK+YF++
Sbjct: 84 -----------PTDPSEQDYDAKAEDAVDYEDIDEEYDGPEVEAATEEDHLLSKKDYFSS 132
Query: 147 EVSLAALKPTASPFDDENYDEDEELEKEHEEVDKETEDTTTILSGEQVECATAVPDGEKS 206
A++ S FD+ENYDEDEE +++ T S EQ++ A
Sbjct: 133 NAVYASVNSKVSVFDEENYDEDEEPPNDNDLPSDNILQNCTSASAEQLDMA--------- 183
Query: 207 PEGD----PQVGSLGAEEEMTAGVKDYDEELADILKGPLDGQVSTPLPVLCVEDGKVILR 262
P D ++ S +E E + + + +E+ + + L+ + +T LPVLC+EDG VIL+
Sbjct: 184 PSNDNLAVEKMSSSLSEPEESFESEAFQKEM--VAEEQLESKTATSLPVLCIEDGSVILK 241
Query: 263 FSEIFGIHEPLKKGKKRDQRYSTPKDK-YNTMDVSSLVEEDEEVYLKGSGQGFPLFKEAN 321
FSEIFG EP++K K R+ P +K + + +VEEDEEV+L+ + Q K
Sbjct: 242 FSEIFGAQEPVRKAKM--DRHKRPVNKELQITNFTDIVEEDEEVFLRSTIQNLSALKHIK 299
Query: 322 IFQHGIFSLNDDDSELVKFGVEQDAATISEHDEQRKDSCICSEPMKEESNVNPSVGWKSM 381
+ + S +D+ + V + KDSC+ +PMK++ + +S
Sbjct: 300 TNDNFVESDSDESTSDVALRL--------------KDSCLSEQPMKDK---DIPTAVQSP 342
Query: 382 PSPNFFPLDQHDWEENIVWDNSP-----------AASDNSIESHEIAGADVESALMRGIE 430
P+F+PL+ +WE +IVW NSP A S S++ H D + G
Sbjct: 343 VFPDFYPLEHENWENDIVWGNSPTTAIQPCLTSCAISKESLDDH---NEDQAEGYVSGC- 398
Query: 431 LDTGQNNFHERSTSPNEKDCIVNMQNSPVLSETFGSKSSSDNTSHLFTESRYHPQLLRLE 490
D QN FH +S V+++ FG D+TS+ E+ Y P LR E
Sbjct: 399 WDV-QNKFH----------------SSSVMADPFGHTEIPDSTSYRSPENSYSP--LRKE 439
Query: 491 SQLDLDNHSHANGIKENVSIKLCQSDAVKRFSKHSLQNRDMMEGSWLDNIIWEPVDAVGK 550
+ + ++ N I + V I D + +K SL N++++EGSWLDNI+W+P + V K
Sbjct: 440 TAQENNSLDEPNNITQPVKI-----DTTRHLNKLSLLNKELLEGSWLDNIVWDPSEDVPK 494
Query: 551 PKLILDLQDEQMLFEILDNKDDEHPLLHAGAMIITRSAKPS 591
PKLI DL+D+ MLFEILD K+ +H HA AMI+TR K S
Sbjct: 495 PKLIFDLKDDHMLFEILDEKNGDHLRSHARAMIVTRPMKTS 535
>gi|79406683|ref|NP_188534.2| transcription initiation factor TFIID subunit 1-B [Arabidopsis
thaliana]
gi|75127333|sp|Q6PUA2.1|TAF1B_ARATH RecName: Full=Transcription initiation factor TFIID subunit 1-B;
Short=AtTAF1b; AltName: Full=TAFII250-B
gi|46391798|gb|AAS90944.1| trancription cofactor TAF250 [Arabidopsis thaliana]
gi|332642666|gb|AEE76187.1| transcription initiation factor TFIID subunit 1-B [Arabidopsis
thaliana]
Length = 1786
Score = 771 bits (1991), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/600 (66%), Positives = 469/600 (78%), Gaps = 29/600 (4%)
Query: 586 RSAKPSDFKPAESVKLFYLGKELEDHKSLADQNVRPNSLIHLIRTKIHLLPRAQKLPGEN 645
++++ DFK E+VK+FY+GKELED KSLA+QNV+PNSL+HL+RTK+HL P AQKLPGEN
Sbjct: 602 KASRKLDFKETEAVKMFYMGKELEDEKSLAEQNVQPNSLVHLLRTKVHLWPWAQKLPGEN 661
Query: 646 KSLRPPGAFKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGAL 705
KSLRPPGAFKKKSDLS +DGHVFLMEYCEERPL+LSNAGMGANLCTYYQKSSP DQ G L
Sbjct: 662 KSLRPPGAFKKKSDLSNQDGHVFLMEYCEERPLMLSNAGMGANLCTYYQKSSPEDQHGNL 721
Query: 706 LCSGNNCLGNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSA 765
L + ++ LG+V+ LE G+KSPFLG++ GCSQSS+ETNMY+APVF H++ +TD+LLVRSA
Sbjct: 722 LRNQSDTLGSVIILEHGNKSPFLGEVHGGCSQSSVETNMYKAPVFPHRLQSTDYLLVRSA 781
Query: 766 KGKISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCI 825
KGK+S+RRI+K+ V QQEP ME+MSP SKNL Y +NRM+ VYREF + I
Sbjct: 782 KGKLSLRRINKIVAVGQQEPRMEIMSPASKNLHAYLVNRMMAYVYREFKHRDR------I 835
Query: 826 GVDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHV 885
DELS F N+S+A +RK ++ C+ L RD NGK WS KR F G L L PE V
Sbjct: 836 AADELSFSFSNISDATVRKYMQVCSDLERDANGKACWSKKRKFDKIPLG-LNTLVAPEDV 894
Query: 886 CSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSS 945
CSYESM AGL+RLKHLGIT+ TLPASIS+A++QLPDE I AAASHI RELQITPWNLSS
Sbjct: 895 CSYESMLAGLFRLKHLGITRFTLPASISTALAQLPDERI--AAASHIARELQITPWNLSS 952
Query: 946 NFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTV 1005
+FV C Q RENIERLEITGVGDPSGRGLGFSYVR APK+S +S KKKAAA RG TV
Sbjct: 953 SFVTCATQGRENIERLEITGVGDPSGRGLGFSYVRVAPKSSAASEHKKKKAAACRGVPTV 1012
Query: 1006 TGTDADLRRLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG-------- 1057
TGTDAD RRLSMEAAREVLLKFNVP+E+IAKQT+ HR AMIRK+SSEQAASG
Sbjct: 1013 TGTDADPRRLSMEAAREVLLKFNVPDEIIAKQTQRHRTAMIRKISSEQAASGGKVGPTTV 1072
Query: 1058 -----------VQLQQQTRGKCQEIWDRQVQSLSAADDDEIGSDSE-HSDLDSFAGDLEN 1105
+QLQQQ R C EIWDRQ SLSA DDD S++E +SDLDSF GDLE+
Sbjct: 1073 GMFSRSQRMSFLQLQQQAREMCHEIWDRQRLSLSACDDDGNESENEANSDLDSFVGDLED 1132
Query: 1106 LLDAEEFEEEESNYDTKHDKVEGVKGLKMRRRPIQVQAEEEIEDEAAEAAELCRLLMDDD 1165
LLDAE+ E E + + ++K++GVKGLKMRR P QV+ +EEIEDEAAE ELCRLLM D+
Sbjct: 1133 LLDAEDGGEGEESNKSMNEKLDGVKGLKMRRWPSQVEKDEEIEDEAAEYVELCRLLMQDE 1192
Score = 288 bits (738), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 200/491 (40%), Positives = 282/491 (57%), Gaps = 31/491 (6%)
Query: 114 VDYEDIDEQYEGPEIQIASEEDYLLPKKEYFAAEVSLAALKPTASPFDDENYDEDEELEK 173
VDY DE+Y+GPE+Q+ +EED+LLPK+EY +A +L+ L AS FDDE+YDE EK
Sbjct: 5 VDYGSNDEEYDGPELQVVTEEDHLLPKREYLSAAFALSGLNSRASVFDDEDYDEQGGQEK 64
Query: 174 EHEEVDKETEDTTTILSGEQVECATAVPDGEKSPEGDPQVGSLGAEEEMTAGVKDYDEEL 233
EH V+K S + E V EK + + + LG + +M G D EEL
Sbjct: 65 EHVPVEK---------SFDSEEREPVVLKEEKPVKHEKEASILGNKNQMDTG--DVQEEL 113
Query: 234 A-DILKGPLDGQVSTPLPVLCVED-GKVILRFSEIFGIHEPLKKGKKRDQRYSTPKDKYN 291
+ + LD + TPLP L +ED G VIL+FSEIF I EP KK +KR+ R T +DKY
Sbjct: 114 VVGLSEATLDEKRVTPLPTLYLEDDGMVILQFSEIFAIQEPQKKRQKREIRCITYRDKYI 173
Query: 292 TMDVSSLVEEDEEVYLKGSGQGFPLFKEANIFQHGIFSLNDDDSELVKFGVEQDAATIS- 350
+MD+S L+E+DEEV LK G+ K+ + Q + + S+LVK G+ +D + S
Sbjct: 174 SMDISELIEDDEEVLLKSHGRIDTHGKKTDQIQLDVPLPIRERSQLVKSGIVRDTTSESR 233
Query: 351 EHDEQRKDSCICSEPMKEESNVNPSVGWKSMPSPNFFPLDQHDWEENIVWDNSPAASDNS 410
E + +DSCI E +K++ + S +S + FPLDQ +WE I+W+ SP S N
Sbjct: 234 EFTKLGRDSCIMGELLKQDLKDDNSSLCQSQLTMEVFPLDQQEWEHLILWEISPQFSANC 293
Query: 411 IESHEIAGADVESALMRGIELDTGQNNFHERSTSPNEKDCIVNMQ--NSPVLS------- 461
E + + +ESA GI + +N S N + Q N+ +L
Sbjct: 294 CEGFK---SGLESA---GIMVQVRASNSVTEQESLNVMNSGGQTQGDNNNMLEPFFVNPL 347
Query: 462 ETFGSKSSSDNTSHLFTESRYHPQLLRLESQLDLDNHSHANGIKENVSIKLCQSDAVKRF 521
E+FGS+ S +T+ +SR+HPQLLRLESQ D D H NG ++K SDA R
Sbjct: 348 ESFGSRGSQ-STNESTNKSRHHPQLLRLESQWDED-HYRENGDAGRENLKQLNSDARGRL 405
Query: 522 SKHSLQNRDMMEGSWLDNIIWEPVDAVGKPKLILDLQDEQMLFEILDNKDDEHPLLHAGA 581
S +LQ+RDM + SWLD+IIWE + + KLI DLQDEQM+FE+ +NK+ ++ LHAG+
Sbjct: 406 SGLALQDRDMWDESWLDSIIWESDKDLSRSKLIFDLQDEQMIFEVPNNKERKYLQLHAGS 465
Query: 582 MIITRSAKPSD 592
I++RS+K D
Sbjct: 466 RIVSRSSKSKD 476
>gi|297834820|ref|XP_002885292.1| hypothetical protein ARALYDRAFT_479422 [Arabidopsis lyrata subsp.
lyrata]
gi|297331132|gb|EFH61551.1| hypothetical protein ARALYDRAFT_479422 [Arabidopsis lyrata subsp.
lyrata]
Length = 1775
Score = 764 bits (1974), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/615 (65%), Positives = 474/615 (77%), Gaps = 34/615 (5%)
Query: 576 LLHAG-----AMIITRSAKPSDFKPAESVKLFYLGKELEDHKSLADQNVRPNSLIHLIRT 630
LLH G + + ++++ D+K E++++FY+GKELED KSLA+QNV+PNSL+HL+RT
Sbjct: 574 LLHVGREESVSSLKAKASRKLDYKETEAMRMFYMGKELEDEKSLAEQNVQPNSLVHLLRT 633
Query: 631 KIHLLPRAQKLPGENKSLRPPGAFKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLC 690
K+HL P AQKLP EN+SLRPPGAFKKKSDLS +DGHVFLMEYCEERPL+LSNAGMGANLC
Sbjct: 634 KVHLWPWAQKLPDENRSLRPPGAFKKKSDLSNQDGHVFLMEYCEERPLILSNAGMGANLC 693
Query: 691 TYYQKSSPGDQAGALLCSGNNCLGNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVF 750
TYYQKSSP DQ G LL + ++ LG+V+ LE GDKSPFLG+I GCSQSS+ETNMY+APVF
Sbjct: 694 TYYQKSSPEDQHGNLLRNQSDTLGSVIILEHGDKSPFLGEIHGGCSQSSVETNMYKAPVF 753
Query: 751 THKVATTDFLLVRSAKGKISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVY 810
H++ +TD+LLVRSAKGK+S+RRIDK+ V QQEP ME+MSP SKNL TY +NR++ VY
Sbjct: 754 PHRLQSTDYLLVRSAKGKLSLRRIDKIVAVGQQEPRMEIMSPASKNLHTYLVNRLVAYVY 813
Query: 811 REFSAAAKRGLLPCIGVDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHI 870
+EF L I DELS F N+S+A +RK +K CA L RD NGK WS KR F
Sbjct: 814 QEFK------LRDRIAADELSFLFSNVSDATVRKNMKVCADLERDENGKPCWSKKRNFDK 867
Query: 871 PSEGDLRKLAYPEHVCSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAAS 930
G L L PE VCSYESM AGL+RLK LGIT TLPASIS+A+++LPDEAI AAAS
Sbjct: 868 ILLG-LNTLVAPEDVCSYESMLAGLFRLKQLGITWFTLPASISTALARLPDEAI--AAAS 924
Query: 931 HIERELQITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSA 990
H+ERELQITPWNLSS+FV CT Q RENIERLEITGVGDPS RGLGFSY++ A KAS +S
Sbjct: 925 HVERELQITPWNLSSSFVTCTTQGRENIERLEITGVGDPSERGLGFSYIQVARKASAASE 984
Query: 991 MVKKKAAANRGGSTVTGTDADLRRLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLS 1050
+KKK AA RG TVTGTDAD RRLSMEAAREVLLKFNVP+E+IAKQTR HR AMIRKLS
Sbjct: 985 HMKKKVAACRGVPTVTGTDADPRRLSMEAAREVLLKFNVPDEIIAKQTRRHRTAMIRKLS 1044
Query: 1051 SEQAASG-------------------VQLQQQTRGKCQEIWDRQVQSLSAADDDEIGSDS 1091
SEQAASG +QLQQQ R +CQEIWDRQ SLSA D D S++
Sbjct: 1045 SEQAASGGKVDPTRIGMFARGQRMSFLQLQQQARERCQEIWDRQRLSLSACDGDGNESEN 1104
Query: 1092 E-HSDLDSFAGDLENLLDAEEFEEEESNYDTKHDKVEGVKGLKMRRRPIQVQAEEEIEDE 1150
E +SDLDSF GDLENLLD E E E +Y + ++K++GVKGLKMRR P QV+ +EE EDE
Sbjct: 1105 EANSDLDSFVGDLENLLDVEGAGEGEESYKSMNEKLDGVKGLKMRRWPSQVEKDEENEDE 1164
Query: 1151 AAEAAELCRLLMDDD 1165
AAE AELCRLLM D+
Sbjct: 1165 AAEYAELCRLLMQDE 1179
Score = 275 bits (703), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 200/489 (40%), Positives = 287/489 (58%), Gaps = 40/489 (8%)
Query: 114 VDYEDIDEQYEGPEIQIASEEDYLLPKKEYFAAEVSLAALKPTASPFDDENYDEDEELEK 173
VDYE DE+ +GPE+Q+ +EED+LLPK+EYF+A SL++L AS FDDE+YDEDE E+
Sbjct: 5 VDYESNDEESDGPELQVVTEEDHLLPKREYFSAAFSLSSLNSRASVFDDEDYDEDEGQEE 64
Query: 174 EHEEVDKETEDTTTILSGEQVECATAVPDGEKSPEGDPQVGSLGAEEEMTAGVKDYDEEL 233
+H V+K S + E V E + + G LG +++M G EEL
Sbjct: 65 KHVPVEK---------SFDPGEREPVVLLEENHVGYEKEAGILGNKDQMDTG-DVQKEEL 114
Query: 234 ADILKGPLDGQVSTPLPVLCVED-GKVILRFSEIFGIHEPLKKGKKRDQRYSTPKDKYNT 292
D+ + LD + TPLP L ++D G VIL+FSEIF I EP +K +KR+ R T ++KY +
Sbjct: 115 DDLSECNLDEKSVTPLPTLYLDDDGMVILQFSEIFAIQEPRQKRQKREIRCITYREKYIS 174
Query: 293 MDVSSLVEEDEEVYLKGSGQGFPLFKEANIFQHGIFSLNDDDSELVKFGVEQDAATIS-E 351
MD+S LVE+DEEV LK G+ KEAN Q + + S+LVK G +D ++ S E
Sbjct: 175 MDISELVEDDEEVLLKSHGRINTHEKEANQIQLAVPLPIRECSQLVKSGTVRDTSSESRE 234
Query: 352 HDEQRKDSCICSEPMKEESNVNPSVGWKSMPSPNFFPLDQHDWEENIVWDNSPAASDNSI 411
+DSCI E +K++ + S +S + FPLDQ +WE I+W+NSP SDN
Sbjct: 235 FTTLGRDSCIMGELVKQDLKDDNSSLCQSQLTMEVFPLDQQEWEHLILWENSPEFSDN-- 292
Query: 412 ESHEIAGADVESALMRGIELDTGQ-------NNFHERSTSPNEKDCIVNMQNSPVLSETF 464
L+R LD + N + + + + +V +P+ E+F
Sbjct: 293 -------------LVRASNLDLSRKVCWFSLNVMNSGGQAQADNNMLVPFCVNPL--ESF 337
Query: 465 GSKSSSDNTSHLFTESRYHPQLLRLESQLDLDNHSHANGIK-ENVSIKLCQSDAVKRFSK 523
GS+ S +T+ +SR+HPQLLRLES+ D D+HS + EN +K SDA+ R S
Sbjct: 338 GSRGSQ-STNESTNKSRHHPQLLRLESERDEDHHSENDDAGWEN--LKQLNSDALGRLSG 394
Query: 524 HSLQNRDMMEGSWLDNIIWEPVDAVGKPKLILDLQDEQMLFEILDNKDDEHPLLHAGAMI 583
+LQ+RDM + SWLD+IIWE + + KLI DLQDEQM+FE+ +NK+ ++ LHAG+ I
Sbjct: 395 FALQDRDMCDESWLDSIIWESDKDLSRSKLIFDLQDEQMIFEVPNNKERKYLQLHAGSRI 454
Query: 584 ITRSAKPSD 592
++RS+K D
Sbjct: 455 VSRSSKSKD 463
>gi|9280321|dbj|BAB01700.1| unnamed protein product [Arabidopsis thaliana]
Length = 1810
Score = 753 bits (1943), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/723 (58%), Positives = 509/723 (70%), Gaps = 64/723 (8%)
Query: 586 RSAKPSDFKPAESVKLFYLGKELEDHKSLADQNVRPNSLIHLIRTKIHLLPRAQKLPGEN 645
++++ DFK E+VK+FY+GKELED KSLA+QNV+PNSL+HL+RTK+HL P AQKLPGEN
Sbjct: 602 KASRKLDFKETEAVKMFYMGKELEDEKSLAEQNVQPNSLVHLLRTKVHLWPWAQKLPGEN 661
Query: 646 KSLRPPGAFKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGAL 705
KSLRPPGAFKKKSDLS +DGHVFLMEYCEERPL+LSNAGMGANLCTYYQKSSP DQ G L
Sbjct: 662 KSLRPPGAFKKKSDLSNQDGHVFLMEYCEERPLMLSNAGMGANLCTYYQKSSPEDQHGNL 721
Query: 706 LCSGNNCLGNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSA 765
L + ++ LG+V+ LE G+KSPFLG++ GCSQSS+ETNMY+APVF H++ +TD+LLVRSA
Sbjct: 722 LRNQSDTLGSVIILEHGNKSPFLGEVHGGCSQSSVETNMYKAPVFPHRLQSTDYLLVRSA 781
Query: 766 KGKISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCI 825
KGK+S+RRI+K+ V QQEP ME+MSP SKNL Y +NRM+ VYREF + I
Sbjct: 782 KGKLSLRRINKIVAVGQQEPRMEIMSPASKNLHAYLVNRMMAYVYREFKHRDR------I 835
Query: 826 GVDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTF-HIPSEGDLRKLAYPEH 884
DELS F N+S+A +RK ++ C+ L RD NGK WS KR F IP L L PE
Sbjct: 836 AADELSFSFSNISDATVRKYMQVCSDLERDANGKACWSKKRKFDKIPL--GLNTLVAPED 893
Query: 885 ----------VCSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIER 934
VCSYESM AGL+RLKHLGIT+ TLPASIS+A++QLPDE I AAASHI R
Sbjct: 894 VSLDFEFVSCVCSYESMLAGLFRLKHLGITRFTLPASISTALAQLPDERI--AAASHIAR 951
Query: 935 ELQITPWNLSSNFVACTNQ--------------DRENIERLEITGVGDPSGRGLGFSYVR 980
ELQITPWNLSS+FV C Q RENIERLEITGVGDPSGRGLGFSYVR
Sbjct: 952 ELQITPWNLSSSFVTCATQVNITYIGNFKSSELGRENIERLEITGVGDPSGRGLGFSYVR 1011
Query: 981 AAPKASVSSAMVKKKAAANRGGSTVTGTDADLRRLSMEAAREVLLKFNVPEEMIAKQTRW 1040
APK+S +S KKKAAA RG TVTGTDAD RRLSMEAAREVLLKFNVP+E+IAKQT+
Sbjct: 1012 VAPKSSAASEHKKKKAAACRGVPTVTGTDADPRRLSMEAAREVLLKFNVPDEIIAKQTQR 1071
Query: 1041 HRIAMIRKLSSEQAASG-------------------VQLQQQTRGKCQEIWDRQVQSLSA 1081
HR AMIRK+SSEQAASG +QLQQQ R C EIWDRQ SLSA
Sbjct: 1072 HRTAMIRKISSEQAASGGKVGPTTVGMFSRSQRMSFLQLQQQAREMCHEIWDRQRLSLSA 1131
Query: 1082 ADDDEIGSDSE-HSDLDSFAGDLENLLDAEEFEEEESNYDTKHDKVEGVKGLKMRRRPIQ 1140
DDD S++E +SDLDSF GDLE+LLDAE+ E E + + ++K++GVKGLKMRR P Q
Sbjct: 1132 CDDDGNESENEANSDLDSFVGDLEDLLDAEDGGEGEESNKSMNEKLDGVKGLKMRRWPSQ 1191
Query: 1141 VQAEEEIEDEAAEAAELCRLLMDDDEAELKKKKKKTKAQVEGGLSLAKSISGLE-IVERL 1199
V+ +EEIEDEAAE ELCRLLM +E + KKKK K EG S S E +++
Sbjct: 1192 VEKDEEIEDEAAEYVELCRLLMQGNENDKKKKKLKDVG--EGIGSFPPPRSNFEPFIDKK 1249
Query: 1200 KKANKPAKHIAITVQPNGSHTANEQI--KDPKEEESLIAKRNLSGKVQAMKKNNVQGEKI 1257
A +P I + HT N K PK+++ + + + MKK + +K+
Sbjct: 1250 YIATEPDASFLIVNESTVKHTKNVSTTSKSPKDKQV----KEIGTPICQMKKILKENQKV 1305
Query: 1258 IKG 1260
G
Sbjct: 1306 FMG 1308
Score = 288 bits (738), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 198/488 (40%), Positives = 281/488 (57%), Gaps = 25/488 (5%)
Query: 114 VDYEDIDEQYEGPEIQIASEEDYLLPKKEYFAAEVSLAALKPTASPFDDENYDEDEELEK 173
VDY DE+Y+GPE+Q+ +EED+LLPK+EY +A +L+ L AS FDDE+YDE EK
Sbjct: 5 VDYGSNDEEYDGPELQVVTEEDHLLPKREYLSAAFALSGLNSRASVFDDEDYDEQGGQEK 64
Query: 174 EHEEVDKETEDTTTILSGEQVECATAVPDGEKSPEGDPQVGSLGAEEEMTAGVKDYDEEL 233
EH V+K S + E V EK + + + LG + +M G D EEL
Sbjct: 65 EHVPVEK---------SFDSEEREPVVLKEEKPVKHEKEASILGNKNQMDTG--DVQEEL 113
Query: 234 A-DILKGPLDGQVSTPLPVLCVED-GKVILRFSEIFGIHEPLKKGKKRDQRYSTPKDKYN 291
+ + LD + TPLP L +ED G VIL+FSEIF I EP KK +KR+ R T +DKY
Sbjct: 114 VVGLSEATLDEKRVTPLPTLYLEDDGMVILQFSEIFAIQEPQKKRQKREIRCITYRDKYI 173
Query: 292 TMDVSSLVEEDEEVYLKGSGQGFPLFKEANIFQHGIFSLNDDDSELVKFGVEQDAATIS- 350
+MD+S L+E+DEEV LK G+ K+ + Q + + S+LVK G+ +D + S
Sbjct: 174 SMDISELIEDDEEVLLKSHGRIDTHGKKTDQIQLDVPLPIRERSQLVKSGIVRDTTSESR 233
Query: 351 EHDEQRKDSCICSEPMKEESNVNPSVGWKSMPSPNFFPLDQHDWEENIVWDNSPAASDNS 410
E + +DSCI E +K++ + S +S + FPLDQ +WE I+W+ SP S N
Sbjct: 234 EFTKLGRDSCIMGELLKQDLKDDNSSLCQSQLTMEVFPLDQQEWEHLILWEISPQFSANC 293
Query: 411 IESH----EIAGADVESALMRGIELDTGQNNFHERSTSPNEKDCIVNMQNSPVLS--ETF 464
E E AG V+ +R T Q + + ++ + NM ++ E+F
Sbjct: 294 CEGFKSGLESAGIMVQ---VRASNSVTEQESLNVMNSGGQTQGDNNNMLEPFFVNPLESF 350
Query: 465 GSKSSSDNTSHLFTESRYHPQLLRLESQLDLDNHSHANGIKENVSIKLCQSDAVKRFSKH 524
GS+ S +T+ +SR+HPQLLRLESQ D D H NG ++K SDA R S
Sbjct: 351 GSRGSQ-STNESTNKSRHHPQLLRLESQWDED-HYRENGDAGRENLKQLNSDARGRLSGL 408
Query: 525 SLQNRDMMEGSWLDNIIWEPVDAVGKPKLILDLQDEQMLFEILDNKDDEHPLLHAGAMII 584
+LQ+RDM + SWLD+IIWE + + KLI DLQDEQM+FE+ +NK+ ++ LHAG+ I+
Sbjct: 409 ALQDRDMWDESWLDSIIWESDKDLSRSKLIFDLQDEQMIFEVPNNKERKYLQLHAGSRIV 468
Query: 585 TRSAKPSD 592
+RS+K D
Sbjct: 469 SRSSKSKD 476
>gi|168053757|ref|XP_001779301.1| transcription initiation factor TFIID, subunit TAF1 [Physcomitrella
patens subsp. patens]
gi|162669313|gb|EDQ55903.1| transcription initiation factor TFIID, subunit TAF1 [Physcomitrella
patens subsp. patens]
Length = 2253
Score = 692 bits (1786), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/601 (62%), Positives = 447/601 (74%), Gaps = 27/601 (4%)
Query: 587 SAKPSDFKPAESVKLFYLGKELEDHKSLADQNVRPNSLIHLIRTKIHLLPRAQKLPGENK 646
+ K D KP+E K+FY GKEL D + A Q V PNS++HL+RTKI+ P+AQ+LPGENK
Sbjct: 924 AKKLGDLKPSEKTKIFYSGKELVDGYTFAQQQVPPNSVLHLVRTKIYPWPKAQRLPGENK 983
Query: 647 SLRPPGAFKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALL 706
LRPPGAFKKKS+LSVKDGHV LMEYCEERPL+L N GMG+ L TYY+K +P D A L
Sbjct: 984 PLRPPGAFKKKSELSVKDGHVALMEYCEERPLVLGNVGMGSRLYTYYRKRTPTDATAATL 1043
Query: 707 CSGNN-CLGNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSA 765
+ +G L LEP + SPFLGDI+ G +QSSLETNMYRAPVF HKVATTDFLLVRS
Sbjct: 1044 RAERGPWVGITLPLEPTEDSPFLGDIRPGETQSSLETNMYRAPVFPHKVATTDFLLVRSP 1103
Query: 766 KGKISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLL-PC 824
KGK+S+RRID V VV QQEP MEV++P SK +Q Y NR+LV +YREF K G++ P
Sbjct: 1104 KGKLSLRRIDSVHVVGQQEPHMEVLTPTSKLVQNYVGNRLLVYLYREFREKEKPGVITPH 1163
Query: 825 IGVDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEH 884
+ D+++ QFP+L+E IRK+LK CA L++ G G+ W M+R F IPSE ++R+L PE+
Sbjct: 1164 VRADDVTSQFPSLTEGFIRKRLKHCADLQKIG-GEMCWIMRRNFRIPSEEEMRRLVTPEN 1222
Query: 885 VCSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLS 944
VC+YESMQAGL+ LK +G+ +LT P+ +S+AM+QLPDEAI LAAASHIERELQITPWNLS
Sbjct: 1223 VCTYESMQAGLHHLKRMGVHKLTQPSGLSAAMNQLPDEAITLAAASHIERELQITPWNLS 1282
Query: 945 SNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGST 1004
SNFVA T Q R ++ERLEI G GDPSGRGLGFSY+R A K + A+V+KKAAA RGG
Sbjct: 1283 SNFVAATMQGRGSLERLEIVGAGDPSGRGLGFSYLRVATKPPNAGALVEKKAAAARGGGA 1342
Query: 1005 VTGTDADLRRLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASGV------ 1058
VTGTDADLRRLSMEAAREVLLKF VPEE+I K TRWHRIAM+RKLSSEQAA+GV
Sbjct: 1343 VTGTDADLRRLSMEAAREVLLKFKVPEEVIDKLTRWHRIAMVRKLSSEQAATGVKLGAAT 1402
Query: 1059 -------------QLQQQTRGKCQEIWDRQVQSLSAADDDEIGSDSEH-SDLDSFAGDLE 1104
QLQQQTR KCQ+IWDRQ QSLS AD D+ SD E DLDSFAGDLE
Sbjct: 1403 LNKFARGQRMSFLQLQQQTREKCQDIWDRQAQSLSIADGDDSESDGEAGGDLDSFAGDLE 1462
Query: 1105 NLLDAEEFEEEESNYDTKHDKVEGVKGLKMRRRPIQVQAEEEIEDEAAEAAELCRLLMDD 1164
NLL+AEE +E K K EG+ GL R R Q EE+IEDE AEAAEL R+L D
Sbjct: 1463 NLLEAEEGDE----VGGKKGKREGMGGLGARLRKQIAQQEEDIEDEEAEAAELRRMLRAD 1518
Query: 1165 D 1165
D
Sbjct: 1519 D 1519
Score = 112 bits (281), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 116/396 (29%), Positives = 191/396 (48%), Gaps = 60/396 (15%)
Query: 220 EEMTAGVKDYDEELADILKGPLDGQVSTPLPVLCVEDGKVILRFSEIFGIHEPL-----K 274
+E T+ KD +EE A I LPVLC EDGK +LRFSE+FG+ EP +
Sbjct: 430 QETTSSSKDQEEEAAKI-----------SLPVLCQEDGKTVLRFSELFGVREPYWVIGHR 478
Query: 275 KGKKRDQRYSTPKDKYNTMDVSSLVEEDEEVYLKGSGQGFPLFKEANIFQHGIF----SL 330
KG++R + ++ K + D+ ++ E+DEE LK Q L E++ + G F SL
Sbjct: 479 KGRQR-RGHNREKRERPEEDLEAM-EDDEEAVLKRCSQQILLAAESSSAE-GDFESASSL 535
Query: 331 NDDDSELVKFGVEQDA---ATISEHD-----EQRKDSCICSEPMKEESNV---NPSVGWK 379
D D V G E+D+ A + H+ +Q+K +EPMK ++++ + + +
Sbjct: 536 EDSD---VGSGPEEDSYQTAFVLSHNRRNRTKQKKFVFTPAEPMKVDADLYEDDIAESRR 592
Query: 380 SMPSPNFFPLDQHDWEENIVWDNSPAASDNSIESHEIAGADVESALMRGIELDTGQNNFH 439
+P NF + +WE+NI+WD+ A E+ ES + H
Sbjct: 593 LIPDANFDLIYLEEWEDNIIWDSLDATRRPRCHLVEVDSESEESRVSETDHQPPATKQCH 652
Query: 440 ERSTSPNEKDCIVNMQNSPVLSETFGSKSSS--DNTSHLFTESRYHPQLLRLES---QLD 494
E + + DC P + E SS+ D+ + ++ HPQ+LRLE+ + +
Sbjct: 653 EELSDCS--DC-----QRPYIVEPLCQISSNVEDDGLTIPAKTSRHPQMLRLETLSLRKE 705
Query: 495 LDNHSHANGIKENVSIKLCQSDAVKRFSKHSLQNRDMMEGSWLDNIIWEPVD-AVGKPKL 553
++ A +K ++ L VK +N+++ G WL NI W ++ + + K+
Sbjct: 706 PEDEERAELLKHISNLTL----EVKE------KNQELSRGDWLGNICWGDLEPGLPRSKV 755
Query: 554 ILDLQDEQMLFEILDNKDDEHPLLHAGAMIITRSAK 589
I DL D QM+FE ++KD + LHA A+++T K
Sbjct: 756 IFDLMDPQMVFETTESKDGKSICLHAAAVLLTPRGK 791
Score = 95.9 bits (237), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/154 (40%), Positives = 82/154 (53%), Gaps = 48/154 (31%)
Query: 28 GNRLLGFMFGNVDYAGDLDVDYLDE-----------------------------DAKEHL 58
G ++LGFMFGNVD +G LD +YLD+ DAKEHL
Sbjct: 159 GQQMLGFMFGNVDDSGGLDEEYLDQNSGYESRLLLYSLHIQFRCSIFNYGRSRKDAKEHL 218
Query: 59 AAVADKLGPSLTDIDVWNSQSCFQLFCSYCLLSVNSPQPPVDAVEQDYDKKAEDAVDYED 118
+A+A +LGPSL DI+ QL+ L+ S + +DYD+KA+DAVDYED
Sbjct: 219 SALAHQLGPSLVDIE--------QLYAKRKELTDVSEGEEL----EDYDQKADDAVDYED 266
Query: 119 IDEQYEGPEIQIASEEDYLLPKKEYFAAEVSLAA 152
I EQYEGPE+Q+A P+ F AE +LA
Sbjct: 267 IQEQYEGPEVQLA-------PQDIRFYAEAALAG 293
>gi|168030227|ref|XP_001767625.1| transcription initiation factor TFIID, subunit TAF1 [Physcomitrella
patens subsp. patens]
gi|162681154|gb|EDQ67584.1| transcription initiation factor TFIID, subunit TAF1 [Physcomitrella
patens subsp. patens]
Length = 2228
Score = 671 bits (1730), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/545 (63%), Positives = 412/545 (75%), Gaps = 23/545 (4%)
Query: 587 SAKPSDFKPAESVKLFYLGKELEDHKSLADQNVRPNSLIHLIRTKIHLLPRAQKLPGENK 646
+ K D P E +K+FY GKEL D + A Q V PNS++HL+RTKI+ P+AQ+LPGENK
Sbjct: 904 AKKLGDLIPFEKMKVFYSGKELVDGYTFAQQQVPPNSVLHLVRTKIYPWPKAQRLPGENK 963
Query: 647 SLRPPGAFKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALL 706
LRPPGAFKKKS+LSVKDGHV LMEYCEERPLLL N GMG L TYY+K S D A L
Sbjct: 964 PLRPPGAFKKKSELSVKDGHVALMEYCEERPLLLGNVGMGGRLFTYYRKRSSTDATAATL 1023
Query: 707 CSGNN-CLGNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSA 765
+ +G L LEP + SPFLGDI+ G +QSSLETNMYRAP+F HKVATTDFLLVRS
Sbjct: 1024 RAERGPWVGITLPLEPTEDSPFLGDIRPGETQSSLETNMYRAPIFPHKVATTDFLLVRSP 1083
Query: 766 KGKISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLL-PC 824
KGK+S+RRID + VV QQEP MEV++P SK++Q + NR+LV +YREF K G++ P
Sbjct: 1084 KGKLSLRRIDSIHVVGQQEPHMEVLTPTSKSVQNHVGNRLLVYLYREFREKEKPGVITPH 1143
Query: 825 IGVDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEH 884
+ D+++ QFP+L+E IRK+LK CA L++ G G+ W M+R F IPSE ++R+L PE+
Sbjct: 1144 VRADDVTSQFPSLTEGFIRKRLKHCADLQKVG-GEMCWMMRRNFRIPSEEEMRRLVTPEN 1202
Query: 885 VCSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLS 944
VC+YESMQAGL+ LK +G+ +LT P+ +++AM+QLPDEAI LAAASHIERELQITPWNLS
Sbjct: 1203 VCTYESMQAGLHHLKRMGVHKLTQPSGLAAAMNQLPDEAITLAAASHIERELQITPWNLS 1262
Query: 945 SNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGST 1004
SNFVA T Q R ++ERLEI G GDPSGRGLGFSY+R A K + A+V+KKAAA RGG
Sbjct: 1263 SNFVAATMQGRGSLERLEIVGAGDPSGRGLGFSYLRVATKPPNAGALVEKKAAAARGGGA 1322
Query: 1005 VTGTDADLRRLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASGV------ 1058
VTGTDADLRRLSMEAAREVLLKF VPEE+I K TRWHRIAM+RKLSSEQAA+GV
Sbjct: 1323 VTGTDADLRRLSMEAAREVLLKFKVPEEIIDKLTRWHRIAMVRKLSSEQAATGVKLGAAT 1382
Query: 1059 -------------QLQQQTRGKCQEIWDRQVQSLSAADDDEIGSDSEH-SDLDSFAGDLE 1104
QLQQQTR KCQ+IWDRQ QSL AD D+ SD E DLDSFAGDLE
Sbjct: 1383 LNKFARGQRMSFLQLQQQTREKCQDIWDRQAQSLVMADGDDSESDGEAGGDLDSFAGDLE 1442
Query: 1105 NLLDA 1109
NLL+A
Sbjct: 1443 NLLEA 1447
Score = 186 bits (471), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 187/647 (28%), Positives = 290/647 (44%), Gaps = 135/647 (20%)
Query: 30 RLLGFMFGNVDYAGDLDVDYLDEDAKEHLAAVADKLGPSLTDIDVWNSQSCFQLFCSYCL 89
++LGFMFGNVD +G LD +YLD+DAKEHL+A+A +LGPSL DI+ QL
Sbjct: 173 QMLGFMFGNVDDSGGLDEEYLDQDAKEHLSALAHQLGPSLFDIE--------QLCAKRKR 224
Query: 90 LSVNSPQPPVDAVEQDYDKKAEDAVDYEDIDEQYEGPEIQIASEEDYLLPKKEYFAAEVS 149
L+ S +DYD+KA DAVDYEDI EQYEGPE+Q+A + D + A V
Sbjct: 225 LTDAS----AADEHEDYDQKAVDAVDYEDIQEQYEGPEVQLAPQ-DMQFYAESALARSVK 279
Query: 150 LAAL------------KPTASPFDDENYDEDEELEKEHEEV------------------- 178
L +PT + +D ++D ++ + E
Sbjct: 280 LVEEDNYDEDEDFDSEQPTEAKVEDWDFDSEQPDGSKMESPVKIAPGMILNSLRFPLGFS 339
Query: 179 ------------DKETEDTTTILSGE-------QVECATAVPDGEKSPEGDPQVGS---- 215
D ET+D + + Q +C T+ D S + D +
Sbjct: 340 ACACALIPFICNDSETDDEALLTQEDEEEVPVAQEQCRTSAVDMMASDDEDEKEEDWDQI 399
Query: 216 LGAEEEMTAGVKDYDEELADILKGPLDGQVSTPLPVLCVEDGKVILRFSEIFGIHEP--- 272
LG++E T+ ++ ++E A I LPVLC E GK +LRFSE+FG+ EP
Sbjct: 400 LGSQE-TTSSSREQEDEAAKI-----------SLPVLCQEGGKTVLRFSELFGVREPYWV 447
Query: 273 LKKGKKRDQRYSTPKDKYNTMDVSSLVEEDEEVYLKGSGQGFPLFKEANIFQHGIFSLND 332
+ K R +R + + + + +E+DEE LK Q P+ + G +
Sbjct: 448 IGHRKGRQKRVHSREKRERLEEDLEAMEDDEEAVLKRCSQQ-PVIAADSSTAEGSLGSSS 506
Query: 333 DDSELVKFGVE---QDAATIS----EHDEQRKDSCICSEPMK-EESNVNPSVG--WKSMP 382
+D ++ E Q A IS + +Q+K SEPMK +E + + + +P
Sbjct: 507 EDFDIGNRSEEDGNQTALFISHSRRDRTKQKKLVFTASEPMKGDEDSYEEDIAECRRQIP 566
Query: 383 SPNFFPLDQHDWEENIVWDNSPAASDN-SIESHEIAGADVESALMRGIELDTGQNNFHER 441
NF + Q +WE++I+WD S + SI H VE ++ DT Q++
Sbjct: 567 DANFDLIHQVEWEDDIIWDTSDVSRRGASISDHRSTCHLVE------VDRDTEQSHL--- 617
Query: 442 STSPNEKDCIVNMQ-----------NSPVLSETFGSKSS---SDNTSHLFTESRYHPQLL 487
S + C+V Q P + E K ++ + ++ HPQ+L
Sbjct: 618 --SDVDLQCLVKEQCDTRLSDCSDWRRPYVVEPLCQKCRDIEDEDELTMPAKTVRHPQML 675
Query: 488 RLESQLDLDNHSHANGIKENVSIKLCQSDAVKRFSKHSLQ----NRDMMEGSWLDNIIW- 542
RLE+ L H + +S ++R + +L+ N+++ GSWL +I W
Sbjct: 676 RLET---LRFHREPG--------EESRSALLRRINNTTLEVKEKNQELTRGSWLGSIFWG 724
Query: 543 EPVDAVGKPKLILDLQDEQMLFEILDNKDDEHPLLHAGAMIITRSAK 589
EP + + K+I DL D QM+FE + D + LHA A+++T K
Sbjct: 725 EPESGLPRSKVIFDLMDSQMVFETTEANDGQSICLHAAAVVLTAVGK 771
>gi|297725133|ref|NP_001174930.1| Os06g0645800 [Oryza sativa Japonica Group]
gi|255677272|dbj|BAH93658.1| Os06g0645800, partial [Oryza sativa Japonica Group]
Length = 880
Score = 658 bits (1698), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/516 (64%), Positives = 403/516 (78%), Gaps = 24/516 (4%)
Query: 680 LSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLTLEPGDKSPFLGDIKAGCSQSS 739
L+NAGM A LCTYYQK+SP DQ L S ++ LG +L ++P DKSPFLG+I++G QS
Sbjct: 1 LANAGMAARLCTYYQKTSPSDQTATSLRSNSDGLGTMLAIDPADKSPFLGNIRSGSHQSC 60
Query: 740 LETNMYRAPVFTHKVATTDFLLVRSAKGKISIRRIDKVAVVAQQEPLMEVMSPGSKNLQT 799
LETNMYRAPVF HKVATTD+LLVRS KG +S+RRIDK+ V QQEP MEV SPG+KN+Q
Sbjct: 61 LETNMYRAPVFPHKVATTDYLLVRSPKGMLSLRRIDKLYAVGQQEPHMEVFSPGTKNMQN 120
Query: 800 YSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLSEAIIRKKLKECAFLRRDGNGK 859
Y +NR+LV VYREF A K G++P I DEL +Q P ++EAI+RK+LK CA LR+ G
Sbjct: 121 YILNRILVYVYREFRAREKPGIIPQIRADELPIQ-PPITEAIVRKRLKHCADLRKGPKGH 179
Query: 860 QVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRLKHLGITQLTLPASISSAMSQL 919
+ + F IPSE +LR+L PE+VC YESMQAG YRLKHLGI +LT P ++SAM+QL
Sbjct: 180 LFYIQRPDFRIPSEEELRRLLTPENVCCYESMQAGQYRLKHLGIEKLTQPVGLASAMNQL 239
Query: 920 PDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYV 979
PDEAI LAAA+HIERELQIT WNL+SNFVACTNQD+ENIERLEITGVGDPSGRGLGFSYV
Sbjct: 240 PDEAIELAAAAHIERELQITSWNLTSNFVACTNQDKENIERLEITGVGDPSGRGLGFSYV 299
Query: 980 RAAPKASVSSAMVKKKAAANRGGSTVTGTDADLRRLSMEAAREVLLKFNVPEEMIAKQTR 1039
R PKA VS++ KKK+AA + G+TVTGTDADLRRLSM+AARE+LLKF VPEE I K TR
Sbjct: 300 RVTPKAPVSNSTHKKKSAAAK-GTTVTGTDADLRRLSMDAARELLLKFGVPEEQIDKLTR 358
Query: 1040 WHRIAMIRKLSSEQAASGV-------------------QLQQQTRGKCQEIWDRQVQSLS 1080
WHRIAM+RKLSSEQAASGV QLQQQT+ KCQEIWDRQ+QSLS
Sbjct: 359 WHRIAMVRKLSSEQAASGVTMDEIPVSKFARGQRMSFLQLQQQTKEKCQEIWDRQIQSLS 418
Query: 1081 AADDDEIGSDSE-HSDLDSFAGDLENLLDAEEFEEEE-SNYDTKHDKVEGVKGLKMRRRP 1138
A D +E GSD+E +SDLDSFAGDLENLLDAEEF++E+ N D + DK++G++GLKMRR
Sbjct: 419 AMDGNENGSDTEANSDLDSFAGDLENLLDAEEFDDEDVGNTDIRSDKMDGMRGLKMRRCH 478
Query: 1139 IQVQAEEEIEDEAAEAAELCRLLMDDDEAELKKKKK 1174
Q Q EEI+D+ AEAA L L+++ ++++K+KK+
Sbjct: 479 TQSQINEEIQDDVAEAA-LVEKLLEESDSDMKRKKQ 513
>gi|302784346|ref|XP_002973945.1| hypothetical protein SELMODRAFT_414424 [Selaginella moellendorffii]
gi|300158277|gb|EFJ24900.1| hypothetical protein SELMODRAFT_414424 [Selaginella moellendorffii]
Length = 1916
Score = 657 bits (1694), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/686 (56%), Positives = 474/686 (69%), Gaps = 37/686 (5%)
Query: 587 SAKPSDFKPAESVKLFYLGKELEDHKSLADQNVRPNSLIHLIRTKIHLLPRAQKLPGENK 646
S K D KP+E+ KL Y G+ELE +KS A+Q V PNS++HL+RTK+H P+AQ+LPGENK
Sbjct: 697 SKKFGDLKPSENTKLMYSGRELESNKSFAEQRVPPNSVLHLVRTKVHPWPKAQRLPGENK 756
Query: 647 SLRPPGAFKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALL 706
RPPGAFKKKS+LSVKDGHV LMEYCEERPLLLSN GMGA L TYY+K SP D A L
Sbjct: 757 PTRPPGAFKKKSELSVKDGHVALMEYCEERPLLLSNVGMGAVLSTYYRKMSPTDSTAATL 816
Query: 707 CSGNNC-LGNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSA 765
+G VL LEP + SPFLG+I+ G +QS LETNMYRAPVF H+V++TDFLLVRS+
Sbjct: 817 KEERGSWIGAVLPLEPAEDSPFLGNIRLGETQSCLETNMYRAPVFQHRVSSTDFLLVRSS 876
Query: 766 KGKISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCI 825
KGK+S+RRID + VV QQEP +EV++P SK + Y NR+LV+VYREF A K G+ P I
Sbjct: 877 KGKLSLRRIDGLHVVGQQEPHIEVIAPSSKTVLHYLGNRLLVHVYREFRAKDKPGMSPQI 936
Query: 826 GVDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHV 885
G DEL FP+L++ IRK+LK CA L+R +G W M++ + IPSE +LR++ PE+V
Sbjct: 937 GADELMAHFPSLTDGFIRKRLKHCADLQRGPHGDMRWVMRQGYRIPSEEELRRMVTPENV 996
Query: 886 CSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSS 945
CSYESMQAG + LK +G+ +LT +++A+ Q+PD + LA A+HIEREL ITPWNL++
Sbjct: 997 CSYESMQAGQHHLKRMGVNKLTHQNGLAAAICQIPDVPVTLATAAHIERELLITPWNLTA 1056
Query: 946 NFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTV 1005
NFVA Q R IERLEI G GDP+GRGLGFSY+R A + + AMV+KKAAA RGG V
Sbjct: 1057 NFVAAMMQGRNGIERLEIIGPGDPTGRGLGFSYIRVALRPPNTGAMVEKKAAAARGGGAV 1116
Query: 1006 TGTDADLRRLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQA----------- 1054
TGTDADLRRLSMEAAREVLLKF VP+E I K TRW RIAM+R LSSE A
Sbjct: 1117 TGTDADLRRLSMEAAREVLLKFGVPQEEIDKLTRWDRIAMVRTLSSEHAAAGEATGAAAL 1176
Query: 1055 ---ASG-----VQLQQQTRGKCQEIWDRQVQSLSAADDDEIGSDSE-HSDLDSFAGDLEN 1105
A G VQLQQQ R +CQEIWDRQVQSL A D DE S+ E + DLDSFAGDLEN
Sbjct: 1177 NKFARGNRLPFVQLQQQVRERCQEIWDRQVQSLLAIDGDESESEGEGNGDLDSFAGDLEN 1236
Query: 1106 LLDAEEFEEEESNYDTKHDKVEGVKGLKMRRRPIQVQAEEEIEDEAAEAAELCRLLMDDD 1165
E EE++ N K DK EG++GL RRR +Q Q EE++EDEAAEAAEL R+LM+DD
Sbjct: 1237 --LLEAEEEDDKNVAAKKDKREGLRGLGARRRALQAQLEEDMEDEAAEAAELHRMLMEDD 1294
Query: 1166 EAELKKKKKKTKAQVEGGLSLAKSISGLEIVERLKKANKPA-----------KHIAITVQ 1214
EAE +K+K KA + S + ++ PA K I
Sbjct: 1295 EAEEDEKRK--KAAIANASSNGNAPVATPAPPPIQALPTPAATGPKKKRKILKRIIKIKN 1352
Query: 1215 PNGSHTANEQ-IKDPKEEESLIAKRN 1239
P+G+ T E+ IKDP E +AK+N
Sbjct: 1353 PDGTITRREEIIKDPIEIAKHLAKKN 1378
Score = 154 bits (388), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 173/600 (28%), Positives = 273/600 (45%), Gaps = 129/600 (21%)
Query: 30 RLLGFMFGNVDYAGDLDVDYLDEDAKEHLAAVADKLGPSLTDIDVWNSQSCFQLFCSYCL 89
R+LGFMFGNVD GDLDV+YLD++AKEHL A+AD+LGPSL D+++ S Q S L
Sbjct: 58 RMLGFMFGNVDDTGDLDVEYLDQEAKEHLFALADQLGPSLVDLEL--SSKARQFTASAAL 115
Query: 90 LSVNSPQPPVDAVEQDYDKKAEDAVDYEDIDEQYEGPEIQIASEED-YLLPK-KEYFAAE 147
+ DYD+KAEDAVDYEDIDE A E+D +LP+ K+Y+A
Sbjct: 116 KE-----------QDDYDRKAEDAVDYEDIDE---------ACEDDGQMLPEDKQYYAQ- 154
Query: 148 VSLAALKPTASPFDDENYDED--EELEKEHEEVDKETEDTTTILSGEQVECATA------ 199
AAL + ++++YDE+ ++ ++ K TE+ ++ ++ T
Sbjct: 155 ---AALAVPSKQVEEDDYDEELPDDTVPAAPDLPKPTEEPLVSIASDETPLPTPELLSSS 211
Query: 200 ------------------VPDGEKSPEGDPQVGSLGAEEEMTAGVK---DYDEELADILK 238
V E P Q+ G+ +EM + D +EEL + L
Sbjct: 212 SILPSPSSASPLSTALLPVTSPEDLPLSRTQIEVEGSPDEMLDESEDDIDSEEELYEDLS 271
Query: 239 GPLDGQVSTPLPVLCVEDGKVILRFSEIFGIHEP--LKKGKKRDQRYSTPKDKYNTMDVS 296
D LP++ E GK IL+FSEIFG +P + KK + S K + D
Sbjct: 272 AD-DESEQFELPIIFQEHGKQILQFSEIFGAKQPFWMLGNKKLRTKRSHFKGRPGRFD-- 328
Query: 297 SLVEEDEEVYLKGSGQGFPLFKEANIFQHGIFSLNDDDSELVKFGVE-QDAATISEHDEQ 355
S++++DE LK + N D ++L ++ ++ +++ +
Sbjct: 329 SMIDDDEAQVLK------------------VLPENHDITQLYYQEIDAREGQELADELNE 370
Query: 356 RKDSCICSEPMKEESNVNPSVGWKSMPSPNFFPLDQHDWEENIVWDNSPAAS-DNSIESH 414
+ +P+ + + + S NF P+ Q DWE IVWD S D E
Sbjct: 371 VGPKFLSCQPL--DKKLPALADIEKDFSVNFDPIHQLDWETEIVWDAERKPSQDEDFEIA 428
Query: 415 EIAGADVESALMRGIELDTGQNNFHERSTSPNEKDCIVNMQNSPVLSETFGSKSSSDNTS 474
E A D L + +G++ F D ++ ++ P+ + G ++S +
Sbjct: 429 EPAEGD-RLHLQASV---SGKDAF----------DKLIILE--PLCRD--GRRASKTASK 470
Query: 475 HLFTESRYHPQLLRLESQLDLDNHSHANGIKENVSIKLCQSDAVKRFS-KHSLQNRDMME 533
HPQ+LRLE+ H N + S + R + + L+N D+
Sbjct: 471 --------HPQMLRLEAW----RHQPGNEL----------SRKLDRLNFEVELKNPDLAA 508
Query: 534 GSWLDNIIWEPVDA---VGKPKLILDLQDEQMLFEILDNKDDEHPLLHAGAMIIT-RSAK 589
G+WL N+ W+ DA K + I DL D M+FE+ D ++ + HA AM+I+ R++K
Sbjct: 509 GTWLSNVCWDEEDAKQRSSKYRAIFDLMDSHMVFEVSDVRETKSIRDHAAAMLISPRTSK 568
>gi|357484597|ref|XP_003612586.1| Transcription initiation factor TFIID subunit 1-A [Medicago
truncatula]
gi|355513921|gb|AES95544.1| Transcription initiation factor TFIID subunit 1-A [Medicago
truncatula]
Length = 2196
Score = 547 bits (1409), Expect = e-152, Method: Compositional matrix adjust.
Identities = 268/385 (69%), Positives = 317/385 (82%), Gaps = 7/385 (1%)
Query: 577 LHAGA-----MIITRSAKPSDFKPAESVKLFYLGKELEDHKSLADQNVRPNSLIHLIRTK 631
LH GA + +++K DFK E+VK+FYLG+EL+D SL QNV+PNSL+HL+RTK
Sbjct: 837 LHVGAEETLSSVKAKASKKLDFKATETVKIFYLGRELDDQISLIAQNVQPNSLLHLVRTK 896
Query: 632 IHLLPRAQKLPGENKSLRPPGAFKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCT 691
IHL PRAQK+PGENKSLRPPGAFKKKSDLSVKDGHVFLMEYCEERPLLLSN GMGA LCT
Sbjct: 897 IHLWPRAQKVPGENKSLRPPGAFKKKSDLSVKDGHVFLMEYCEERPLLLSNVGMGARLCT 956
Query: 692 YYQKSSPGDQAGA-LLCSGNNCLGNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVF 750
YYQKSSP D +GA LL + ++ LG++++L+P DKSPFLGD+K G SQSSLETNMYRAPVF
Sbjct: 957 YYQKSSPDDHSGAALLRNTDSSLGHIISLDPADKSPFLGDLKPGSSQSSLETNMYRAPVF 1016
Query: 751 THKVATTDFLLVRSAKGKISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVY 810
HKV TD+LLVRS KGK+S+RRIDKV VV QQEPLMEV SPGSKNLQT+ +NR+LV++
Sbjct: 1017 AHKVPPTDYLLVRSPKGKLSLRRIDKVNVVGQQEPLMEVFSPGSKNLQTFMMNRLLVHMC 1076
Query: 811 REFSAAAKRGLLPCIGVDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHI 870
REF AA K+ L P I +D+ QFP LSEA RK++KE A L+R NG+ ++ KR F +
Sbjct: 1077 REFQAAEKQHLSPYIRIDDFLSQFPFLSEASFRKRIKEYANLQRGANGQSIFVKKRNFRM 1136
Query: 871 PSEGDLRKLAYPEHVCSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAAS 930
SE +LRK+ PE VC++ESMQAGLYRLKHLGIT+ T P +ISSAMS+LPDEAIALAAAS
Sbjct: 1137 WSEDELRKMVTPELVCAFESMQAGLYRLKHLGITE-THPNNISSAMSRLPDEAIALAAAS 1195
Query: 931 HIERELQITPWNLSSNFVACTNQDR 955
H+ERELQITPWNLSSNFVACT+Q R
Sbjct: 1196 HMERELQITPWNLSSNFVACTSQMR 1220
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 280/625 (44%), Positives = 370/625 (59%), Gaps = 69/625 (11%)
Query: 18 DEEEYEDVSGGNRLLGFMFGNVDYAGDLDVDYLDEDAKEHLAAVADKLGPSLTDID---- 73
DEEEYE+ GN LGFMFGNVD +GDLDVDYLDEDAKEHL+A+ADKLGPSLTDID
Sbjct: 113 DEEEYEESGKGNHFLGFMFGNVDNSGDLDVDYLDEDAKEHLSALADKLGPSLTDIDLSGK 172
Query: 74 ------------------------------------VWNSQSCFQL------FCSYCLLS 91
VW S + L C+
Sbjct: 173 SPRTPPGIVEQGEVVCQEKLYHAVFDILLRSNGGLAVWCSMAIHWLPKYGVSVCASAFCL 232
Query: 92 VNSPQPPVDAVEQDYDKKAEDAVDYEDIDEQYEGPEIQIASEEDYLLPKKEYFAAEVSLA 151
++P + + +KAEDAVDYEDIDE+Y+GPE + A+EEDYLLPKK++FAAE SL
Sbjct: 233 YDAPMVIFISQVEYCGEKAEDAVDYEDIDEEYDGPETETANEEDYLLPKKDFFAAEASLE 292
Query: 152 ALKPTASPFDDENYDEDEELEKEHEEVDKETEDTTTILSGEQVECATAVPDGEKSPEGDP 211
AL+ S FDDENY DEE +KE + V+ E + LS EQ E + E D
Sbjct: 293 ALERKTSVFDDENY--DEESDKEQDFVNNEAKVDNISLSVEQEESFVDASKEGSALEHDL 350
Query: 212 QVGSLGAEEEMTAGVKDYDEELADILKGPLDGQVSTPLPVLCVEDGKVILRFSEIFGIHE 271
QV SL EE+ A V+ EE+ + LK + +TPLPVL V+DGK +LRFSEIFGI E
Sbjct: 351 QV-SLQT-EELDADVQT-PEEVPEFLKRSM----ATPLPVLYVDDGKAVLRFSEIFGIQE 403
Query: 272 PLKKGKKRDQRYSTPKDKYNTMDVS-SLVEEDEEVYLKGSGQGFPLFKEANIFQHGIFSL 330
P +KG+K+++R+STP+D+Y + D+S +VEEDEE +LKG + L K+ + + + S
Sbjct: 404 PPRKGEKKERRHSTPRDRYKSFDLSDDIVEEDEEEFLKGFSESLTLNKQVCVVRTDV-SE 462
Query: 331 NDDDSELVKFG-VEQDAATISEHDEQRKDSCICSEPMKEESNVNPSVGWK--SMPSPNFF 387
N+ D E KFG + DA+ + D Q KDSC+ EPMK + + WK ++ NF+
Sbjct: 463 NNVDLEFPKFGFLHGDASLTVKDDRQPKDSCLSGEPMK--GDFADDLAWKDHTLMLANFY 520
Query: 388 PLDQHDWEENIVWDNSPAAS--DNSIESHEIAGADVESALMRGIELDTGQNNFHERSTSP 445
PLDQ DWE+ I+W NSPAAS DN++ES EI+G+++ ++ IE++T N
Sbjct: 521 PLDQRDWEDEILWGNSPAASDNDNNVESCEISGSELRTSDGGEIEIETRNNLQSVPLKIL 580
Query: 446 NEKDCIVNMQNSPVLSETFGSKSSSDNTSHLFTESRYHPQLLRLESQLDLDNHSHANGIK 505
EKD V SPV + S+ S+ ++ +ES +HPQLLRLE +D+ +G
Sbjct: 581 EEKDHNVFTCCSPVSLDPLDSRDSNGVKTNSISESLFHPQLLRLE----VDSSHIEDGRG 636
Query: 506 ENVSIKLCQSDAVKRFSKHSLQNRDMMEGSWLDNIIWEPVDAVG-KPKLILDLQDEQMLF 564
+VS K Q KR +K QNRD+M+ SW+D I+WE +D KPKLI DLQD QM F
Sbjct: 637 VDVSEKHNQIGQAKRLTKVMSQNRDLMDDSWVDKIMWEELDRPKMKPKLIFDLQDNQMHF 696
Query: 565 EILDNKDDEHPLLHAGAMIITRSAK 589
E+LD+ D H LHAGAMI+TRS K
Sbjct: 697 EVLDSNDGTHLHLHAGAMILTRSLK 721
Score = 212 bits (540), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 137/237 (57%), Positives = 156/237 (65%), Gaps = 29/237 (12%)
Query: 1023 VLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASGV--------------------QLQQ 1062
VLLKFNVPEE IA QTRWHRIA IRKLSSEQAASGV QLQQ
Sbjct: 1411 VLLKFNVPEEDIANQTRWHRIATIRKLSSEQAASGVKVDPTTIGKYARGGQRMSFLQLQQ 1470
Query: 1063 QTRGKCQEIWDRQVQSLSAADDDEIGSDSE-HSDLDSFAGDLENLLDAEEFEE-EESNYD 1120
QTR KCQEIWDRQVQSLS + D+ SDSE +SDLDSFAGDLENLLDAEEFE+ EE+ D
Sbjct: 1471 QTREKCQEIWDRQVQSLSTLNGDDNESDSEGNSDLDSFAGDLENLLDAEEFEDGEEATND 1530
Query: 1121 TKHDKVEGVKGLKMRRRPIQVQAEEEIEDEAAEAAELCRLLMDDDEAELKKKKKKTKAQV 1180
K DK +GVK LKMRRR Q EEEI+DEAAEAAELCRLLMDDDEA +KKKK +
Sbjct: 1531 LKRDKGDGVKALKMRRRTTLAQTEEEIQDEAAEAAELCRLLMDDDEA--YRKKKKKGKVM 1588
Query: 1181 EGGLSLAKSISGLEIVERLKKANKPAKHIAITVQPNGS-HTANEQIKDPKEEESLIA 1236
L + + + ++ K I T+Q NGS H + + D +EEE+L A
Sbjct: 1589 VNPRRLVPKLQPKFVFDNTEQ----VKQITNTLQLNGSNHFKEDALTDHREEENLSA 1641
Score = 133 bits (334), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 64/73 (87%), Positives = 68/73 (93%)
Query: 955 RENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLRR 1014
+ENIER+EITGVGDPSGRGLGFSY RA PKA VS+AMVKKKAAANRGGSTVTGTDADLRR
Sbjct: 1285 KENIERMEITGVGDPSGRGLGFSYARAPPKAPVSNAMVKKKAAANRGGSTVTGTDADLRR 1344
Query: 1015 LSMEAAREVLLKF 1027
LSMEAARE L +F
Sbjct: 1345 LSMEAAREFLNRF 1357
>gi|302771399|ref|XP_002969118.1| hypothetical protein SELMODRAFT_409957 [Selaginella moellendorffii]
gi|300163623|gb|EFJ30234.1| hypothetical protein SELMODRAFT_409957 [Selaginella moellendorffii]
Length = 1140
Score = 537 bits (1384), Expect = e-149, Method: Compositional matrix adjust.
Identities = 267/438 (60%), Positives = 332/438 (75%), Gaps = 1/438 (0%)
Query: 587 SAKPSDFKPAESVKLFYLGKELEDHKSLADQNVRPNSLIHLIRTKIHLLPRAQKLPGENK 646
S K D KP+E+ KL Y G+ELE +KS A+Q V PNS++HL+RTK+H P+AQ+LPGENK
Sbjct: 696 SKKFGDLKPSENTKLMYSGRELESNKSFAEQRVPPNSVLHLVRTKVHPWPKAQRLPGENK 755
Query: 647 SLRPPGAFKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALL 706
RPPGAFKKKS+LSVKDGHV LMEYCEERPLLLSN GMGA L TYY+K SP D A L
Sbjct: 756 PTRPPGAFKKKSELSVKDGHVALMEYCEERPLLLSNVGMGAVLSTYYRKMSPTDSTAATL 815
Query: 707 CS-GNNCLGNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSA 765
+ +G VL LEP + SPFLG+I+ G +QS LETNMYRAPVF H+V++TDFLLVRS+
Sbjct: 816 KEERGSWIGAVLPLEPAEDSPFLGNIRLGETQSCLETNMYRAPVFQHRVSSTDFLLVRSS 875
Query: 766 KGKISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCI 825
KGK+S+RRID + VV QQEP +EV++P SK + Y NR+LV+VYREF A K G+ I
Sbjct: 876 KGKLSLRRIDGLHVVGQQEPHIEVIAPSSKTVLHYLGNRLLVHVYREFRAKDKPGMSSQI 935
Query: 826 GVDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHV 885
G DEL FP+L++ IRK+LK CA L+R +G W M++ + IPSE +LR++ PE+V
Sbjct: 936 GADELMAHFPSLTDGFIRKRLKHCADLQRGPHGDMRWVMRQGYRIPSEEELRRMVTPENV 995
Query: 886 CSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSS 945
CSYESMQAG + LK +G+ +LT +++A+ Q+PD + LA A+HIEREL ITPWNL++
Sbjct: 996 CSYESMQAGQHHLKRMGVNKLTHQNGLAAAICQIPDVPVTLATAAHIERELLITPWNLTA 1055
Query: 946 NFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTV 1005
NFVA Q R IERLEI G GDP+GRGLGFSY+R A + + AMV+KKAAA RGG V
Sbjct: 1056 NFVAAMMQGRNGIERLEIIGPGDPTGRGLGFSYIRVALRPPNTGAMVEKKAAAARGGGAV 1115
Query: 1006 TGTDADLRRLSMEAAREV 1023
TGTDADLRRLSMEAARE+
Sbjct: 1116 TGTDADLRRLSMEAAREL 1133
Score = 114 bits (285), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 159/600 (26%), Positives = 259/600 (43%), Gaps = 132/600 (22%)
Query: 30 RLLGFMFGNVDYAGDLDVDYLDEDAKEHLAAVADKLGPSLTDIDVWNSQSCFQLFCSYCL 89
R+LGFMFGNVD GDLDV+YLD+ ++ + V S Q S L
Sbjct: 60 RMLGFMFGNVDDTGDLDVEYLDQAVFHGFWMKFER------KLIVLLSSKARQFTASAAL 113
Query: 90 LSVNSPQPPVDAVEQDYDKKAEDAVDYEDIDEQYEGPEIQIASEEDYLLPK-KEYFAAEV 148
+ DYD+KAEDAVDYEDIDE E ++ +LP+ K+Y+A
Sbjct: 114 KE-----------QDDYDRKAEDAVDYEDIDEACE--------DDGQMLPEDKQYYAQ-- 152
Query: 149 SLAALKPTASPFDDENYDED--EELEKEHEEVDKETEDTTTILSGEQVECAT-------- 198
AAL + ++++YDE+ ++ ++ K T++ ++ ++ T
Sbjct: 153 --AALAVPSKQVEEDDYDEELPDDTVPAAPDLPKPTDEPLVSIASDETPLPTPELLLSSS 210
Query: 199 -----------------AVPDGEKSPEGDPQVGSLGAEEEMTAGVK---DYDEELADILK 238
V E P Q+ G+ +EM + D +EEL + L
Sbjct: 211 SILPSPSSASPLSTALLPVTSPEDLPLSRTQIEVEGSPDEMLDESEDDIDSEEELYEDLS 270
Query: 239 GPLDGQVSTPLPVLCVEDGKVILRFSEIFGIHEP--LKKGKKRDQRYSTPKDKYNTMDVS 296
D LP++ E GK IL+FSEIFG +P + KK + S K + D
Sbjct: 271 AD-DESEQFELPIMFQEHGKQILQFSEIFGAKQPFWMLGNKKLRTKRSHFKGRPGRFD-- 327
Query: 297 SLVEEDEEVYLKGSGQGFPLFKEANIFQHGIFSLNDDDSELVKFGVE-QDAATISEHDEQ 355
S++++DE LK + N D ++L ++ ++ +++ +
Sbjct: 328 SMIDDDEAQVLK------------------VLPENHDITQLYYQEIDAREGQELADELNE 369
Query: 356 RKDSCICSEPMKEESNVNPSVGWKSMPSPNFFPLDQHDWEENIVWDNSPAAS-DNSIESH 414
+ +P+ ++ + + S NF P+ Q DWE IVWD S D E
Sbjct: 370 VGPKFLSCQPLDKKLPALADI--EKDFSVNFDPIHQLDWETEIVWDAERKPSQDEDFEIA 427
Query: 415 EIAGADVESALMRGIELDTGQNNFHERSTSPNEKDCIVNMQNSPVLSETFGSKSSSDNTS 474
E A D L + +G++ F D ++ ++ P+ + G ++S
Sbjct: 428 EPAEGD-RLHLQASV---SGKDAF----------DKLIILE--PLCRD--GRRASK---- 465
Query: 475 HLFTESRYHPQLLRLESQLDLDNHSHANGIKENVSIKLCQSDAVKRFS-KHSLQNRDMME 533
T S+ HPQ+LRLE+ H N + S + R + + L+N D+
Sbjct: 466 ---TASK-HPQMLRLEAW----RHQPGNEL----------SRKLDRLNFEVELKNPDLAA 507
Query: 534 GSWLDNIIWEPVDA---VGKPKLILDLQDEQMLFEILDNKDDEHPLLHAGAMIIT-RSAK 589
G+WL N+ W+ DA K + I DL D M+FE+ D ++ + HA AM+I+ R++K
Sbjct: 508 GTWLSNVCWDEEDAKQRSSKYRAIFDLMDSHMVFEVSDVRETKSIRDHAAAMLISPRTSK 567
>gi|449464136|ref|XP_004149785.1| PREDICTED: transcription initiation factor TFIID subunit 1-A-like
[Cucumis sativus]
Length = 1984
Score = 444 bits (1143), Expect = e-121, Method: Compositional matrix adjust.
Identities = 263/566 (46%), Positives = 348/566 (61%), Gaps = 29/566 (5%)
Query: 27 GGNRLLGFMFGNVDYAGDLDVDYLDEDAKEHLAAVADKLGPSLTDIDVWNSQSCFQLFCS 86
GGNR LGFMFGNVD +GDLD DYLDEDAKEHL A+ADKLGP+LTDID
Sbjct: 25 GGNRFLGFMFGNVDNSGDLDADYLDEDAKEHLDALADKLGPTLTDID------------- 71
Query: 87 YCLLSVNSPQPPVDAVEQDYDKKAEDAVDYEDIDEQYEGPEIQIASEEDYLLPKKEYFAA 146
LS S + DAVE DYD KAEDAVDYEDIDE+Y+GPEI+ A EED+LLP++EYF+A
Sbjct: 72 ---LSTKSSRIQSDAVEPDYDAKAEDAVDYEDIDEEYDGPEIEAAGEEDHLLPRREYFSA 128
Query: 147 EVSLAALKPTASPFDDENYDEDEELEKEHEEVDKETEDTTTILSGEQVECATAVPDGEKS 206
EVSL+ L+PTAS ++ D DE+ E + V+ E S EQ EC V +GEKS
Sbjct: 129 EVSLSTLEPTASV--FDDEDYDEDFENVPDVVNNSVEPQIIHASDEQGECLEIVSEGEKS 186
Query: 207 --PEGDPQVGSLGAEEEMTAGVKDYDEELADILKGPLDGQVSTPLPVLCVEDGKVILRFS 264
E P E +T + E ++ K D + TPLPVLC+E+G IL+FS
Sbjct: 187 LAVESAPL-----NNEVITGRAESLHEGTPEVQKRLQDDKSHTPLPVLCMENGMAILQFS 241
Query: 265 EIFGIHEPLKKGKKRDQRYSTPKDKYNTMDVSSLVEEDEEVYLKGSGQGFPLFKEANIFQ 324
EIFG+H+ LKK +KR RY T KDKY + DVS +VEEDEE +L G +G K A +
Sbjct: 242 EIFGVHDSLKKKEKRASRYYTRKDKYRSADVSDIVEEDEEAFLHGFSRGVSYVKPAYDVK 301
Query: 325 HGIFSLNDDDSELVKFGVEQDAATISEH-DEQRKDSCICSEPMKEESNVNPSVGWKSMPS 383
+ DD E KFGV Q ++ D Q+KD C +EPMK+ N +G +
Sbjct: 302 DDTTMFDVDDLEYNKFGVVQGVDVMTSRVDWQQKDHCCGAEPMKQVVAENVPIGSNFLLF 361
Query: 384 PNFFPLDQHDWEENIVWDNSPAASDNSIESHEIAGADVESALMRGIELDTG-QNNFHERS 442
F+PLDQ +WEE I+WD+SP +S N++ S++ +G+D+E++ R +E Q E
Sbjct: 362 NTFYPLDQQNWEERILWDDSPVSSKNAVGSYKASGSDIEASPNRDVEPQVSIQIVRSEHH 421
Query: 443 TSPNEKDCIVNMQNSPVLSETFGSKSSSDNTSHLFTESRYHPQLLRLESQLDLDNHSHAN 502
N + + P+L E FGS+ S + E YHPQ+LRLES D+D+ ++
Sbjct: 422 IGLNGDGQSLYHCDFPLL-EPFGSRKISRTEESISPEVIYHPQMLRLESWKDVDDSCQSD 480
Query: 503 GIKENVSIKLCQSDAVKRFSKHSLQNRDMMEGSWLDNIIWEPVDAVGKPKLILDLQDEQM 562
G+KEN+ + QS+AV+ FSK S +NR M+EGSWLD ++WE + + KPK I DL+DE M
Sbjct: 481 GLKENIPDER-QSNAVRSFSKFSPKNRRMLEGSWLDKVLWETDEPIEKPKFIFDLEDEHM 539
Query: 563 LFEILDNKDDEHPLLHAGAMIITRSA 588
LFEI D D ++ H+GAMI+TRS+
Sbjct: 540 LFEISDENDSKYIQFHSGAMILTRSS 565
Score = 437 bits (1125), Expect = e-119, Method: Compositional matrix adjust.
Identities = 253/388 (65%), Positives = 297/388 (76%), Gaps = 32/388 (8%)
Query: 885 VCSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLS 944
VC YESMQAGLYRLKHLG++++ P++ISSAMS+LPDEAI LAAASHIERELQITPWNLS
Sbjct: 1077 VCKYESMQAGLYRLKHLGLSEVH-PSAISSAMSRLPDEAITLAAASHIERELQITPWNLS 1135
Query: 945 SNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGST 1004
SNFVACT Q +ENIERLEITGVGDPSGRGLGFSYVR+ PKA +S+A +KKKAA++RG S
Sbjct: 1136 SNFVACTTQGKENIERLEITGVGDPSGRGLGFSYVRSVPKAPISNASLKKKAASSRGSSA 1195
Query: 1005 VTGTDADLRRLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASGV------ 1058
VTGTDADLRRLSM+AA+EVLLKF+V EE IAK TRWHRIAMIR+LSSEQAASGV
Sbjct: 1196 VTGTDADLRRLSMDAAKEVLLKFDVSEEQIAKLTRWHRIAMIRRLSSEQAASGVQVDPTT 1255
Query: 1059 -------------QLQQQTRGKCQEIWDRQVQSLSAADDDEIGSDSE-HSDLDSFAGDLE 1104
QLQ+QTR KCQEIW+RQ+QSLSA+D E SDSE +SDLDSFAGDLE
Sbjct: 1256 ISKYARGQRMSFLQLQRQTREKCQEIWERQIQSLSASDGAENESDSEGNSDLDSFAGDLE 1315
Query: 1105 NLLDAEEFEEEESNYDTKHDKVEGVKGLKMRRRPIQVQAEEEIEDEAAEAAELCRLLMDD 1164
NLLDAEEFE+E ++ +H+K +GVKGLKMRRRP VQ EEEIEDE AEAAELCRLLM D
Sbjct: 1316 NLLDAEEFEDEVDTFEIRHEKTDGVKGLKMRRRPSIVQTEEEIEDEVAEAAELCRLLM-D 1374
Query: 1165 DEAELKKKKKKTKAQVEGGLSLAKSISGLEIVERLKKANKP--AKHIAITVQPNGSHTAN 1222
DEAE ++KKKK K E LS S KP +H+ QP+ ++ +
Sbjct: 1375 DEAERRRKKKKNKVMGEAVLSTGFQASFFH--------EKPEQTRHLISIAQPDVTYISK 1426
Query: 1223 EQIKDPKEEESLIAKRNLSGKVQAMKKN 1250
E I++ KE ES+ ++ SGK++ MKKN
Sbjct: 1427 ENIREQKEVESISNRKEKSGKLKPMKKN 1454
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 183/284 (64%), Positives = 229/284 (80%)
Query: 583 IITRSAKPSDFKPAESVKLFYLGKELEDHKSLADQNVRPNSLIHLIRTKIHLLPRAQKLP 642
I+ +++K D KP+E +KLFY GKELE KSLA QNV+PNSL+HL+R++I+++PRAQ L
Sbjct: 693 IMAKASKKLDMKPSEMIKLFYSGKELEREKSLAAQNVQPNSLLHLVRSQIYIMPRAQNLR 752
Query: 643 GENKSLRPPGAFKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQA 702
GEN+S+R PGAFKKKSDLSVKDG VFLMEYCEERPLLL N GMGA LCTYYQKSSP DQ
Sbjct: 753 GENRSVRSPGAFKKKSDLSVKDGRVFLMEYCEERPLLLGNIGMGAWLCTYYQKSSPDDQT 812
Query: 703 GALLCSGNNCLGNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLV 762
GALL +G + LG+V+ LEP DKSP+LG++K G Q+SLETNMYRAPVF+HKV TD++LV
Sbjct: 813 GALLRNGGDSLGHVIILEPSDKSPYLGELKGGSVQASLETNMYRAPVFSHKVPMTDYILV 872
Query: 763 RSAKGKISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLL 822
RSAKGK+S+RR+D+ V QQEPLMEV SPG+K+LQ + +NR+ + ++REF AA KR +
Sbjct: 873 RSAKGKLSLRRVDRNFAVGQQEPLMEVFSPGTKSLQIFMMNRLTLYMFREFLAAEKRRRI 932
Query: 823 PCIGVDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKR 866
P I VDEL QFP LSE +IRKKLKE A +R+ +G+ + KR
Sbjct: 933 PDIRVDELPSQFPYLSETVIRKKLKEYALQQRNSSGQIILIKKR 976
>gi|413954632|gb|AFW87281.1| hypothetical protein ZEAMMB73_004859 [Zea mays]
Length = 238
Score = 325 bits (832), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 161/239 (67%), Positives = 192/239 (80%), Gaps = 2/239 (0%)
Query: 787 MEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLSEAIIRKKL 846
MEV SPG+KN+Q Y +NR+L VYREF A + +P I DEL +Q P L+EAI++K+L
Sbjct: 1 MEVFSPGTKNMQNYLLNRVLAYVYREFRARERPDAIPQIRADELPIQSP-LTEAIVKKRL 59
Query: 847 KECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRLKHLGITQL 906
K CA L++ G W+ + F +PSE +LR+L PE VC YESMQAGLYRLK LGI +L
Sbjct: 60 KHCADLKKGPKGHFFWTQRPDFRVPSEEELRRLLTPESVCCYESMQAGLYRLKRLGILKL 119
Query: 907 TLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENIERLEITGV 966
T P ++SAM+QLPDEAI LAAASHIERELQIT WNL+SNFVACTNQDRENIERLEITGV
Sbjct: 120 TQPVGLASAMNQLPDEAIELAAASHIERELQITSWNLTSNFVACTNQDRENIERLEITGV 179
Query: 967 GDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLRRLSMEAAREVLL 1025
GDPSGRGLGFSYVR APKA S++++KKK+AA + G+TVTGTDADLRRLSM+AAREV L
Sbjct: 180 GDPSGRGLGFSYVRVAPKAPASNSVLKKKSAAAK-GTTVTGTDADLRRLSMDAAREVPL 237
>gi|413954630|gb|AFW87279.1| hypothetical protein ZEAMMB73_604430 [Zea mays]
Length = 659
Score = 318 bits (816), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 223/575 (38%), Positives = 310/575 (53%), Gaps = 87/575 (15%)
Query: 27 GGNRLLGFMFGNVDYAGDLDVDYLDEDAKEHLAAVADKLGPSLTDIDVWNSQSCFQLFCS 86
GGN LLGFMFGNVD +GDLD DYLDEDAKEHL A+ADKLGPSL DID+ S
Sbjct: 91 GGNHLLGFMFGNVDDSGDLDADYLDEDAKEHLFALADKLGPSLKDIDLMKS--------- 141
Query: 87 YCLLSVNSPQPPVDAVEQDYDKKAEDAVDYEDIDEQYEGPEIQIASEEDYLLPKKEYFAA 146
SP P D EQDYD+KAEDAVDYEDIDE+Y+GPE++ +EED +L KK+YF++
Sbjct: 142 -------SPA-PTDPSEQDYDEKAEDAVDYEDIDEEYDGPEVEATTEEDNVLSKKDYFSS 193
Query: 147 EVSLAALKPTASPF-DDENYDEDEELEKEHEEVDKETEDTTTILSGEQVECATAVPDGEK 205
A++ T S F D+ +E+E V E DTTT +E
Sbjct: 194 STVYASVNSTVSVFDDENYDEEEEPPNDNEPPVSIEQADTTTSSDNLAME---------- 243
Query: 206 SPEGDPQVGSLG-AEEEMTAGVKDYDEELADILKGPLDGQVSTPLPVLCVEDGKVILRFS 264
++G L EE M +D + E +G L+ + +T LPVLC+EDG ILRFS
Sbjct: 244 ------KIGLLSHPEENMDFEYEDLENEKG-TGEGQLEPESATSLPVLCIEDGNAILRFS 296
Query: 265 EIFGIHEPLKKGKKRDQRYSTPKDK-YNTMDVSSLVEEDEEVYLKGSGQGFPLFKEANIF 323
EIFGI EP++K K + P DK +V+ VEEDEE+ L+ + Q F K ++
Sbjct: 297 EIFGIQEPVRKVKT--DHHKRPVDKELQIANVADNVEEDEELILRSTMQNFSTLKHIHVN 354
Query: 324 QHGIFSLNDDDSELVKFGVEQDAATISEHDEQRKDSCICSEPMKEESNVNPSVGWKSMPS 383
+ + S +D+ +IS+ + KDSC+ +PMK + +++ + +S
Sbjct: 355 EDFVESDSDE--------------SISDVTLRLKDSCLSEQPMK-DVHMDIRIVQRSPTC 399
Query: 384 PNFFPLDQHDWEENIVWDNSPAASDNSI-------ESHEIAGADVESALMRGIELDTGQN 436
P+F+PL+ +DWE +I+W+NSPA + ES + G D +G +
Sbjct: 400 PDFYPLEHYDWESDIIWNNSPATDQQAYAKICESEESEDTHGED------QGKDYGQASR 453
Query: 437 NFHERSTSPNEKDCIVNMQNSPVLSETFGSKSSSDNTSHLFTESRYHPQLLRLESQLDLD 496
+ +S + SPV+ ETF ++ Y P L E LD
Sbjct: 454 CWDVQSKT----------NGSPVIKETFCCTEMPAPANYCPPGKSYPP--LTNEDNLD-- 499
Query: 497 NHSHANGIKENVSIKLCQSDAVKRFSKHSLQNRDMMEGSWLDNIIWEPVDAVGKPKLILD 556
H N + + V I D + R + S+ NR+++EGSWLDNIIW+P + KPKLI D
Sbjct: 500 -HIMPNNLDDAVKI-----DTMVRLNNLSVLNRELLEGSWLDNIIWDPNEVTPKPKLIFD 553
Query: 557 LQDEQMLFEILDNKDDEHPLLHAGAMIITRSAKPS 591
L+D+ MLFEILD K+ +H HA AMI+++S K S
Sbjct: 554 LKDDHMLFEILDEKNVDHLQSHARAMIVSQSTKTS 588
>gi|440795577|gb|ELR16697.1| bromodomain domain containing protein [Acanthamoeba castellanii str.
Neff]
Length = 1803
Score = 313 bits (802), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 228/669 (34%), Positives = 336/669 (50%), Gaps = 114/669 (17%)
Query: 528 NRDMMEGSWLDNIIWE----PVDAVGKPKLILD---------------LQDEQMLF---- 564
N D+ G WLD +IW+ P AV P LI D L+DE+ +
Sbjct: 371 NEDLASGDWLDAVIWDDRKVPPAAVNNP-LIFDLNDKEMLFEENVKKPLEDEEQMIGAEE 429
Query: 565 -------------------EILDNKDDE-----HPL------LHAGAMIITRSAKPSDF- 593
EI +DE P ++A A +P +
Sbjct: 430 EGVKKVERRRGRRPKRKISEIASIIEDEVEEDLDPFNYSLDRIYANASRALAKIRPKNMG 489
Query: 594 KPAESVKLFYLGKELEDHKS-LADQNVRPNSLIHLIRTKIHLLPRAQKL-----PGENKS 647
KP + L +L K+ A +++R L H RT+ LP ++K+ P E
Sbjct: 490 KPVVQHSIPAL--KLSSFKTNFAPEDLR---LFHRPRTR---LPTSKKIKVTPAPIEGSR 541
Query: 648 LRP-----PGAFKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQA 702
P G ++K +LS KDG V L EY EERP +LSN GMG + YY+K D
Sbjct: 542 TNPRFKKQSGTIRRKRELSGKDGRVVLAEYLEERPPVLSNVGMGTKILNYYRKKDVND-- 599
Query: 703 GALLCSGNNCLGNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLV 762
+ G+++ L+ D+ PFLG++ G + ++ N++RAP+ H TTDFLLV
Sbjct: 600 --IPPDKTREDGDMVLLDQADECPFLGEVPTGDTVQMMDNNLFRAPIVKHNAPTTDFLLV 657
Query: 763 RSAKGKISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLL 822
RS K K IR I V V Q++P+ EV +P S++ + R+ +YR F KR
Sbjct: 658 RS-KNKFYIREIPAVYAVGQEQPVAEVPAPNSRSANNFIKARLQTFIYRLFK---KRANQ 713
Query: 823 PCIGVDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYP 882
+ + ++ FP+ SE IRK+LK+C+ +R G+ W++K+ F +PSE DLR + P
Sbjct: 714 QRVRISDICSAFPSHSETSIRKRLKDCSDFQRGGDDSGWWTLKKDFEMPSEEDLRAMLTP 773
Query: 883 EHVCSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIA--LAAASHIERELQITP 940
E VC+YESM AG RL+ GI +S A++QL E+ AAA+ ++ E+ + P
Sbjct: 774 ETVCAYESMLAGHQRLQDCGIEHTHNATGLSQAVAQLEAESGKKHKAAAAFVKEEVYLAP 833
Query: 941 WNLSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANR 1000
WN + NF++ N + L++TG GDP+G G GFSY+R K +KKA +
Sbjct: 834 WNTTGNFLSVQNGKGQ----LQLTGFGDPTGTGAGFSYLRVPQKVQAQ----QKKAQVPK 885
Query: 1001 GGSTVTGTDADLRRLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG--V 1058
++VTGTDADLR+LS+E AR VLLKF V E++I K RW RI ++R+ SS AA G
Sbjct: 886 --TSVTGTDADLRKLSLENARLVLLKFGVSEDVIEKLGRWERIDLVREKSSAAAAGGDDP 943
Query: 1059 QLQQQTRGK--------------CQEIWDRQVQSLSAADDDEIGSDSE----HSDLDSFA 1100
L + RG+ C I+++Q+ LS + D+I D E + +L FA
Sbjct: 944 NLTKFARGRRFNFQQQQQVYKDECARIFEKQLAFLSELNPDDISDDEEDLQDNIELQDFA 1003
Query: 1101 GDLENLLDA 1109
G++E L+A
Sbjct: 1004 GEMERELEA 1012
>gi|330805260|ref|XP_003290603.1| hypothetical protein DICPUDRAFT_98741 [Dictyostelium purpureum]
gi|325079276|gb|EGC32884.1| hypothetical protein DICPUDRAFT_98741 [Dictyostelium purpureum]
Length = 1836
Score = 268 bits (685), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 169/471 (35%), Positives = 254/471 (53%), Gaps = 41/471 (8%)
Query: 660 LSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLTL 719
LS +DG V L+EY E+ P LLSN GMG + YY+K S D A + G ++ +
Sbjct: 730 LSGRDGRVVLVEYTEQNPPLLSNVGMGMKIRNYYRKKSNHDSAKDVEFED----GELVVI 785
Query: 720 EPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGK-ISIRRIDKVA 778
+ D SPFLGDI G + ++ N+Y++PV+ H + TDFLLVRS GK IR + V
Sbjct: 786 DSNDDSPFLGDIYPGQAVQAVVNNLYKSPVYKHNSSNTDFLLVRSRDGKRWYIRDLGPVY 845
Query: 779 VVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREF---SAAAKRGLLPCIGVDELSVQFP 835
Q P +EV +P S++ + +R+ +YR F S + +R + + ++ FP
Sbjct: 846 SAGQMLPEIEVPAPNSRSANMFLKSRLQAYIYRLFLKKSNSQRR-----LKITDICSSFP 900
Query: 836 NLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGL 895
+ SE IRK+LK+CA +R G+ W++K F +P+E +L+KL PE VC+YESM GL
Sbjct: 901 SQSETSIRKRLKDCADFQRGGDDSGWWTVKDNFPLPTEEELQKLVTPEVVCAYESMLIGL 960
Query: 896 YRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDR 955
RL+ GI T +I + + L ++ + +E EL ITPWNL+ +F A
Sbjct: 961 QRLQDNGIIHFTAQGTIPTILGGLDEDDPIKKSYKPVEDELSITPWNLTGSFQAAM---- 1016
Query: 956 ENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLRRL 1015
+ R++I DP+ R F Y++ P+ V+ K A + + VTGTDADLR+L
Sbjct: 1017 QGKGRMQIIS-EDPTAREDEFCYLK-MPQKVVNQKQKAIKLALQK--NQVTGTDADLRKL 1072
Query: 1016 SMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAA---SGVQLQQQTRG------ 1066
S+ A++ VLL+ V EE I TRW RI ++RK SSE A S + + RG
Sbjct: 1073 SLSASKTVLLELGVSEEKINSLTRWQRIDLVRKKSSEAALASDSNAAMTKFARGSKYSLD 1132
Query: 1067 --------KCQEIWDRQVQSLSAADDDEIGSDSEHSDLDSFAGDLENLLDA 1109
+CQ ++D Q+++L D + D D + DLE++LD+
Sbjct: 1133 HQHLQYKEQCQLVFDNQMKALKGED---LYEDELDPDFEDLQKDLEDILDS 1180
>gi|195038465|ref|XP_001990678.1| GH18122 [Drosophila grimshawi]
gi|193894874|gb|EDV93740.1| GH18122 [Drosophila grimshawi]
Length = 2143
Score = 268 bits (684), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 166/470 (35%), Positives = 250/470 (53%), Gaps = 53/470 (11%)
Query: 659 DLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLT 718
DLS KDG + L E+CEE P L+S GM + + YY++ + D G +
Sbjct: 744 DLSGKDGDIVLTEFCEEHPPLMSQVGMCSKIKNYYKRKAEKDSGPQDYVYGEVAFAHT-- 801
Query: 719 LEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRRIDKVA 778
SPFLG + G +LE NMYRAP++ HK+A DFL++R+ + IR ++ +
Sbjct: 802 ------SPFLGILHQGQCIQALENNMYRAPIYPHKMAPNDFLIIRT-RNSYWIRVVNAIF 854
Query: 779 VVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLS 838
V Q+ PL EV P SK ++ + + V +YR F + R I +D++ FP S
Sbjct: 855 TVGQECPLYEVPGPNSKRANNFTRDFLQVFIYRLFWKS--RDNPRRIRMDDVKRAFPAHS 912
Query: 839 EAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRL 898
E+ IRK+LK+CA +R G W +K F +PSE ++R + PE C+Y SM A RL
Sbjct: 913 ESSIRKRLKQCADFKRTGMDSNWWVIKPEFRLPSEEEIRAMVSPEQCCAYFSMIAAEQRL 972
Query: 899 KHLGITQLTL--PASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRE 956
K G + +L P +QL D+ E+++ PWN + ++ Q
Sbjct: 973 KDAGYGEKSLFAPQEDDDEEAQLLDD------------EVKVAPWNTTRAYI----QAMR 1016
Query: 957 NIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLRRLS 1016
L+++G DP+G G GFSYVR K + S K+ ++ +VTGTDADLRRL
Sbjct: 1017 GKCLLQLSGPADPTGCGEGFSYVRVPNKPTQS-----KEVQESQPKRSVTGTDADLRRLP 1071
Query: 1017 MEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------VQLQ 1061
++ A+E+L KF VPEE I K TRW I ++R LS+E+A +G + Q
Sbjct: 1072 LQRAKELLRKFKVPEEEIKKLTRWEVIDVVRTLSTEKAKAGEEGMDKFSRGNRFSIAEHQ 1131
Query: 1062 QQTRGKCQEIWDRQVQSLSAAD----DDEIGSDSEHSDLDSFAGDLENLL 1107
++ + +CQ I+D Q + L++++ DD+ S SE SDL+ +LEN+L
Sbjct: 1132 ERYKEECQRIFDLQNRVLASSEVLSTDDDESSASEESDLEELGKNLENML 1181
>gi|66801647|ref|XP_629749.1| hypothetical protein DDB_G0292242 [Dictyostelium discoideum AX4]
gi|74851109|sp|Q54DH8.1|TAF1_DICDI RecName: Full=Transcription initiation factor TFIID subunit 1
gi|60463137|gb|EAL61331.1| hypothetical protein DDB_G0292242 [Dictyostelium discoideum AX4]
Length = 2310
Score = 266 bits (680), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 161/443 (36%), Positives = 243/443 (54%), Gaps = 31/443 (6%)
Query: 657 KSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNV 716
KSDLS +DG + L+EY E+ P L+SN GMG + YY+K + D L N G +
Sbjct: 966 KSDLSARDGRLVLIEYTEQHPPLVSNVGMGLRIRNYYKKKNTHDTGPKDL---NFEDGEL 1022
Query: 717 LTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGK-ISIRRID 775
+ L+ ++SPFLGDI G + S+ N+++ P+ H A TDFLLV+S GK IR +
Sbjct: 1023 VMLDNNEESPFLGDINPGQTIQSVVNNLFKVPIHKHNSANTDFLLVKSRDGKRWYIRDVG 1082
Query: 776 KVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFP 835
+ Q P +EV +P S+N + +R+ +YR+F K + + ++ FP
Sbjct: 1083 PIYAAGQILPEVEVPAPNSRNANMFLKSRLQAYIYRQF--LKKSNPQRRLKITDICSAFP 1140
Query: 836 NLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGL 895
+ SE IRK+LK+CA +R G+ W++K F +P+E + +KL PE V S+ESM GL
Sbjct: 1141 SQSETSIRKRLKDCADFQRGGDDSGWWTVKDNFTLPTEEEFQKLVTPEAVVSFESMLIGL 1200
Query: 896 YRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDR 955
RL+ GI T P +I + + L DE + +E EL ITPWNL+ +F++
Sbjct: 1201 QRLQDNGIIHFTAPGTIPTILGNLDDEDPIKKSIKPVEDELSITPWNLTGSFLSAM---- 1256
Query: 956 ENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLRRL 1015
+ RL+I DP+GR +SY++ P+ V+ K A + + VTGTDADLR+L
Sbjct: 1257 QGKGRLQIIS-DDPTGREDEYSYLK-MPQKVVNQKQKAIKLALQK--NQVTGTDADLRKL 1312
Query: 1016 SMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASGVQLQQQT---RG------ 1066
S+ A++ VLL+ V EE I K RW RI ++RK SSE A + T RG
Sbjct: 1313 SLSASKTVLLELGVDEETINKLARWQRIDLVRKKSSEAALASNSNAAMTKFARGSRYSLD 1372
Query: 1067 --------KCQEIWDRQVQSLSA 1081
+CQ ++D Q+++++
Sbjct: 1373 HQNLQYKEQCQLVFDNQIKAIAG 1395
>gi|301610834|ref|XP_002934954.1| PREDICTED: transcription initiation factor TFIID subunit 1-like
[Xenopus (Silurana) tropicalis]
Length = 1831
Score = 266 bits (680), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 168/472 (35%), Positives = 246/472 (52%), Gaps = 45/472 (9%)
Query: 654 FKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCL 713
+ DL+ KDG + L EY EE P L+ GM + + YY K PG GA C
Sbjct: 632 MRTSQDLTGKDGDLILAEYSEENPPLMMQVGMASKIKNYY-KRKPGKDPGAPDCK----F 686
Query: 714 GNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRR 773
G + SPFLG + G + E N++RAP++ HK+ TDFL++R+ +G IR
Sbjct: 687 GETVYCH---TSPFLGSLHPGQLLQAFENNLFRAPIYLHKMTETDFLIIRTRQG-YYIRD 742
Query: 774 IDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQ 833
I + VV QQ PL EV P SK T+ + + V +YR F + R I ++++
Sbjct: 743 IVDIFVVGQQCPLFEVPGPNSKRANTHIRDFLQVFIYRLFWKSKDRPRR--IRMEDIKKA 800
Query: 834 FPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQA 893
FP+ SE+ IRK+LK CA +R G W +K F +P+E ++R + PE C+Y SM A
Sbjct: 801 FPSHSESSIRKRLKLCADFKRTGMDSNWWVLKPDFRLPTEEEIRAMVSPEQCCAYYSMIA 860
Query: 894 GLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQ 953
RLK G + + A P+E I+ E++ PWN + F+A
Sbjct: 861 AEQRLKDAGYGEKSFFA---------PEEENEEDFQMKIDDEVRTAPWNTTRAFIAAM-- 909
Query: 954 DRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLR 1013
+ LE+TGV DP+G G GFSYV+ K + K+ + TVTGTDADLR
Sbjct: 910 --KGKCLLEVTGVADPTGCGEGFSYVKIPNKPTQQKQDDKEPQPVKK---TVTGTDADLR 964
Query: 1014 RLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------V 1058
RLS++ A+++L KF VPEE I K +RW I ++R +S+EQA SG
Sbjct: 965 RLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSKFARGSRFSVA 1024
Query: 1059 QLQQQTRGKCQEIWDRQVQSLSAAD---DDEIGSDSEHSDLDSFAGDLENLL 1107
+ Q++ + +CQ I+D Q + L +A+ D S +E SD + ++EN+L
Sbjct: 1025 EHQERYKEECQRIFDLQNKVLESAEVLSTDTDSSSAEDSDFEEMGKNIENML 1076
>gi|281204255|gb|EFA78451.1| putative protein serine/threonine kinase [Polysphondylium pallidum
PN500]
Length = 1751
Score = 264 bits (675), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 172/504 (34%), Positives = 264/504 (52%), Gaps = 39/504 (7%)
Query: 626 HLIRTKIHLLPRAQKLPGENKSLRPPGAFKKKSDLSVKDGHVFLMEYCEERPLLLSNAGM 685
H R ++ R P + S R K K DLS ++G V +EY E+ P LLSN GM
Sbjct: 782 HQFRIALYNKDRPDDKPKQRGSNRA-DPMKHKLDLSAREGRVIFVEYMEQNPPLLSNVGM 840
Query: 686 GANLCTYYQKSSPGDQAGALLCSGNNCLGNVLTLEPGDKSPFLGDIKAGCSQSSLETNMY 745
+ YY++ + D G + L+ D+SPFLG+I G S+ N+Y
Sbjct: 841 ATRVRNYYRRKNSDDDQFLTFDDGETVM-----LDHNDESPFLGEINPGVPIQSMVNNLY 895
Query: 746 RAPVFTHKVATTDFLLVRSAKGK-ISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINR 804
+AP+ H TDFLL+RS GK IR + + Q P +EV +P S++ + +R
Sbjct: 896 KAPIAKHNPNPTDFLLIRSRDGKKWYIREMGTMYTAGQMMPEIEVPAPNSRSANMFVKSR 955
Query: 805 MLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSM 864
+ +YR F K + + + ++ FP SE IRK+LK+C+ +R G+ W++
Sbjct: 956 LQAYIYRLF--LKKSNIQRRLKISDVCTAFPGQSETSIRKRLKDCSDFQRGGDDSGWWTV 1013
Query: 865 KRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAI 924
K F +P+E +L+KL PE VC+YE+M +GL R++ GI T +I + +S L +
Sbjct: 1014 KDNFPLPTEEELQKLVTPEVVCAYEAMLSGLQRIQDSGIIHFTNAGTIPTMLSNLDENEP 1073
Query: 925 ALAAASHIERELQITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPK 984
+E EL TPWNLS++FV+ + +L++ G DP RG FS+++ P+
Sbjct: 1074 LRKKCKPVEDELNQTPWNLSASFVSAM----QGKGKLQLIG-DDP--RGEMFSFLK-MPQ 1125
Query: 985 ASVSSAMVKKKAAANRGGSTVTGTDADLRRLSMEAAREVLLKFNVPEEMIAKQTRWHRIA 1044
V+ K A + + VTGTDADLR+LS++ ++ VLL+ V EE+I TRW RIA
Sbjct: 1126 KVVNQKQKAIKQALQK--NQVTGTDADLRKLSLKESKIVLLQLGVTEEVINNLTRWQRIA 1183
Query: 1045 MIRKLSSEQA------------ASGVQL-----QQQTRGKCQEIWDRQVQSLSAADDDEI 1087
++RK SSE A A G + Q Q + +CQEI++ Q++++ +DE
Sbjct: 1184 LVRKKSSEAALTNGTDGSMTKFARGSRYSLDHQQLQYKEQCQEIFENQMKAIGGDGEDEA 1243
Query: 1088 GSDSEHSDLDSFAGDLENLLDAEE 1111
D DL+ DLE L A++
Sbjct: 1244 DLD---QDLEDLQKDLEETLFADQ 1264
Score = 40.4 bits (93), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Query: 520 RFSKHSLQNRDMMEGSWLDNIIWEPVDAVGKPK---LILDLQDEQMLFE--ILDNKDDEH 574
++S L N ++ G W+++I+W+ KPK LILDL D MLFE I+ D
Sbjct: 619 QWSLFPLHNSELEAGDWINDIVWDESAPNYKPKISCLILDLNDRNMLFEEHIIRKTDAHE 678
Query: 575 P 575
P
Sbjct: 679 P 679
>gi|297270796|ref|XP_002800114.1| PREDICTED: TAF1 RNA polymerase II, TATA box binding protein
(TBP)-associated factor, 210kDa-like [Macaca mulatta]
Length = 1809
Score = 260 bits (665), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 171/484 (35%), Positives = 249/484 (51%), Gaps = 54/484 (11%)
Query: 659 DLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLT 718
DL+ KDG + L EY EE L+ GM + YY K PG GA C G +
Sbjct: 670 DLTGKDGDLILAEYSEENGPLMMQVGMATKIKNYY-KRKPGKDPGAPDCK----YGETVY 724
Query: 719 LEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRRIDKVA 778
SPFLG + G + E N++RAP++ HK+ TDFL++R+ +G IR + +
Sbjct: 725 CH---TSPFLGSLHPGQLLQAFENNLFRAPIYLHKMPETDFLIIRTRQG-YYIRELVDIF 780
Query: 779 VVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLS 838
VV QQ PL EV P SK T+ + + V +YR F + R I ++++ FP+ S
Sbjct: 781 VVGQQCPLFEVPGPNSKRANTHIRDFLQVFIYRLFWKSKDRPRR--IRMEDIKKAFPSHS 838
Query: 839 EAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRL 898
E+ IRK+LK CA +R G W +K F +P+E ++R + PE C+Y SM A RL
Sbjct: 839 ESSIRKRLKLCADFKRTGMDSNWWVLKSDFRLPTEEEIRAMVSPEQCCAYYSMIAAEQRL 898
Query: 899 KHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENI 958
K G + + A P+E I+ E+ PWN + F+A +
Sbjct: 899 KDAGYGEKSFFA---------PEEENEEDFQMKIDDEVHTAPWNTTRAFIAAM----KGK 945
Query: 959 ERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLRRLSME 1018
LE+TGV DP+G G GFSYV+ P K+ A + TVTGTDADLRRLS++
Sbjct: 946 CLLEVTGVADPTGCGEGFSYVKI-PNKPTQQKDDKEPQAVKK---TVTGTDADLRRLSLK 1001
Query: 1019 AAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------VQLQQQ 1063
A+++L KF VPEE I K +RW I ++R +S+EQA SG + Q++
Sbjct: 1002 NAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSKFARGSRFSVAEHQER 1061
Query: 1064 TRGKCQEIWDRQVQSLSAAD---DDEIGSDSEHSDLDSFAGDLENLLD--------AEEF 1112
+ +CQ I+D Q + LS+ + D S +E SD + ++EN+L + E+
Sbjct: 1062 YKEECQRIFDLQNKVLSSTEVLSSDTDSSSAEDSDFEEMGKNIENMLQNKKTSSQLSREW 1121
Query: 1113 EEEE 1116
EE+E
Sbjct: 1122 EEQE 1125
Score = 40.8 bits (94), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 9/58 (15%)
Query: 521 FSKHSLQNRDMMEGSWLDNIIWEPVDAVGKPKLI------LDLQDEQMLFEILDNKDD 572
+S + N D++ G W DNIIW DA P+L+ LD DE ++ EI D K++
Sbjct: 465 YSIFPIDNEDLVYGRWEDNIIW---DAQAMPRLLEPPVLTLDPNDENLILEIPDEKEE 519
>gi|328868419|gb|EGG16797.1| putative protein serine/threonine kinase [Dictyostelium fasciculatum]
Length = 1811
Score = 260 bits (665), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 171/488 (35%), Positives = 262/488 (53%), Gaps = 40/488 (8%)
Query: 653 AFKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNC 712
+ K K DLS ++G V +EY E+ P LL+N GMGA + +Y++ + D G N
Sbjct: 743 SMKHKIDLSAREGRVVFVEYLEQHPALLNNVGMGARIRNFYRRKNASDAPFLSFEDGENV 802
Query: 713 LGNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGK-ISI 771
L L+ D++PFLGDI G + +L +N+Y+AP+F H + TDFLL+RS GK I
Sbjct: 803 L-----LDTNDETPFLGDITPGRTIQALVSNLYKAPIFRHNPSPTDFLLIRSRDGKKWYI 857
Query: 772 RRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELS 831
R + + QQ P +EV +P S++ + NR+ ++R F K+ + I + ++
Sbjct: 858 REMGTLYTAGQQMPEVEVPAPNSRSANMFLKNRLQAFIHRLFRK--KKNVQRRIRIQDVC 915
Query: 832 VQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESM 891
FP+ SEA IRK+LK+CA L+R G W +K ++ +P E +++K PE VC++ESM
Sbjct: 916 NAFPSQSEASIRKRLKDCADLQRGGEDGGWWILKDSYRLPPEEEIQKSVTPELVCTFESM 975
Query: 892 QAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACT 951
GLY L+ GI T P +I +Q +E EL TPWNL+S+F
Sbjct: 976 LVGLYHLQANGIIHFTSPGTI-PMFTQRESADPNRDRYKLVEDELNRTPWNLTSSFT--- 1031
Query: 952 NQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAM--VKKKAAANRGGSTVTGTD 1009
Q + ++++ V D FSY++ P+ V+ +KK+ N+ VTGTD
Sbjct: 1032 -QAMQGKGKMQL--VSDDPDNNETFSYLK-MPQKVVNQKQKDLKKQLQKNQ----VTGTD 1083
Query: 1010 ADLRRLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQA-ASGV---------- 1058
ADLR+LS++ + VLLK V EE+I TRW RIA++RK SSE A A+G
Sbjct: 1084 ADLRKLSLKESETVLLKLGVSEEVINSLTRWKRIALVRKKSSEAALAAGTDSNAMTKFAR 1143
Query: 1059 -------QLQQQTRGKCQEIWDRQVQSLSAADDDEIGSDSEHSDLDSFAGDLENLLDAEE 1111
Q Q + +CQ I+D Q+++L D +E D + DL+ D+E L ++
Sbjct: 1144 GSRYSLDHQQLQYKERCQNIFDNQMRALQGLDSNEDDDDIDLDDLEDLQKDIEESLSTKK 1203
Query: 1112 FEEEESNY 1119
++ S +
Sbjct: 1204 SNKKNSFF 1211
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 133/321 (41%), Gaps = 64/321 (19%)
Query: 260 ILRFSEIFGIHEPLKKGKKRDQ----RYSTPKDKYNTMDVSSLVEEDEE----VYLKG-S 310
I +FS++F P+ + KKR + + P D +D ++ + ++ L G +
Sbjct: 320 IFKFSDLFAPKMPMDRPKKRRRVKQLPHQPPTDDVVDIDEQTMFSKPQQDTSTTSLSGET 379
Query: 311 GQGFPLFKEANIFQHGIFSLNDDDSELVKFGVEQDAATISEHDEQRK---DSCICSEPMK 367
GQG L + I + S+ V+ E + + H ++++ D EP++
Sbjct: 380 GQGGNLLEMKEITSPAL------KSKSVQEKREYNLMLMLMHQQKQQQLQDEENLFEPLQ 433
Query: 368 EESNVNPSVGWKSMPSPNFFPLDQHDWEENIVWDNSPAASDNSIESHEIAGADVESALMR 427
E++N + +P F ++Q DWEE I+WD DN
Sbjct: 434 EKANDKVLQDYYQLPDAVFNNVEQFDWEEKIIWD----VKDN------------------ 471
Query: 428 GIELDTGQNNFHERSTSPNEKDCIVNMQNSPVLSETFGSKSSSDNTSHLFTESRYHPQLL 487
++N ++ P N+P+L + +S+DN ++ + L+
Sbjct: 472 -------KDNNQQQQLKPT---------NNPLLLQQNNPFTSTDN--YISKSIEFGDHLV 513
Query: 488 RLESQLDLDNHSHANGIKENVSIKLCQSDAVKRFSKHSLQNRDMMEGSWLDNIIWEPVDA 547
++ + D + I + QS V ++S ++N D+ G W++ I+W+
Sbjct: 514 GVKRKRWGDFETIETKIPART---MFQSGIVGQWSIFPMRNTDLERGDWVNEIVWDETST 570
Query: 548 VGKPKL---ILDLQDEQMLFE 565
+PKL ILDL D MLFE
Sbjct: 571 DYRPKLPNIILDLNDRDMLFE 591
>gi|417413962|gb|JAA53290.1| Putative transcription initiation factor tfiid subunit taf1, partial
[Desmodus rotundus]
Length = 1782
Score = 260 bits (664), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 167/472 (35%), Positives = 243/472 (51%), Gaps = 46/472 (9%)
Query: 654 FKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCL 713
+ DL+ KDG + L EY EE L+ GM + YY K PG GA C
Sbjct: 648 MRTPQDLTGKDGDLILAEYSEENGPLMMQVGMATKIKNYY-KRKPGKDPGAPDCK----Y 702
Query: 714 GNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRR 773
G + SPFLG + G + E N++RAP++ HK+ TDFL++R+ +G IR
Sbjct: 703 GETVYCH---TSPFLGSLHPGQLLQAFENNLFRAPIYLHKMPETDFLIIRTRQG-YYIRE 758
Query: 774 IDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQ 833
+ + VV QQ PL EV P SK T+ + + V +YR F +A R I ++++
Sbjct: 759 LVDIFVVGQQCPLFEVPGPNSKRANTHIRDFLQVFIYRLFWKSADRPRR--IRMEDIKKA 816
Query: 834 FPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQA 893
FP+ SE+ IRK+LK CA +R G W +K F +P+E ++R + PE C+Y SM A
Sbjct: 817 FPSHSESSIRKRLKLCADFKRTGMDSNWWVLKSDFRLPTEEEIRAMVSPEQCCAYYSMIA 876
Query: 894 GLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQ 953
RLK G + + A P+E I+ E++ PWN + F+A
Sbjct: 877 AEQRLKDAGYGEKSFFA---------PEEENEEDFQMKIDDEVRTAPWNTTRAFIAAM-- 925
Query: 954 DRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLR 1013
+ LE+TGV DP+G G GFSYV+ K + K TVTGTDADLR
Sbjct: 926 --KGKCLLEVTGVADPTGCGEGFSYVKIPNKPTQQ----KDDKEPQPVKKTVTGTDADLR 979
Query: 1014 RLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------V 1058
RLS++ A+++L KF VPEE I K +RW I ++R +S+EQA SG
Sbjct: 980 RLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSKFARGSRFSVA 1039
Query: 1059 QLQQQTRGKCQEIWDRQVQSLSAAD---DDEIGSDSEHSDLDSFAGDLENLL 1107
+ Q++ + +CQ I+D Q + LS+ + D S +E SD + ++EN+L
Sbjct: 1040 EHQERYKEECQRIFDLQNKVLSSTEVLSTDTDSSSAEDSDFEEMGKNIENML 1091
>gi|444707374|gb|ELW48654.1| Transcription initiation factor TFIID subunit 1-like protein [Tupaia
chinensis]
Length = 1807
Score = 260 bits (664), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 166/467 (35%), Positives = 241/467 (51%), Gaps = 46/467 (9%)
Query: 659 DLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLT 718
DL+ KDG + L EY EE L+ GM + YY K PG GA C G +
Sbjct: 670 DLTGKDGDLILAEYSEENGPLMMQVGMATKIKNYY-KRKPGKDPGAPDCK----YGETVY 724
Query: 719 LEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRRIDKVA 778
SPFLG + G + E N++RAP++ HK+ TDFL++R+ +G IR + +
Sbjct: 725 CH---TSPFLGSLHPGQLLQAFENNLFRAPIYLHKMPETDFLIIRTRQG-YYIRELVDIF 780
Query: 779 VVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLS 838
VV QQ PL EV P SK T+ + + V +YR F + R I ++++ FP+ S
Sbjct: 781 VVGQQCPLFEVPGPNSKRANTHIRDFLQVFIYRLFWKSKDRPRR--IRMEDIKKAFPSHS 838
Query: 839 EAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRL 898
E+ IRK+LK CA +R G W +K F +P+E ++R + PE C+Y SM A RL
Sbjct: 839 ESSIRKRLKLCADFKRTGMDSNWWVLKSDFRLPTEEEIRAMVSPEQCCAYYSMIAAEQRL 898
Query: 899 KHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENI 958
K G + + A P+E I+ E++ PWN + F+A +
Sbjct: 899 KDAGYGEKSFFA---------PEEENEEDFQMKIDDEVRTAPWNTTRAFIAAM----KGK 945
Query: 959 ERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLRRLSME 1018
LE+TGV DP+G G GFSYV+ K + K TVTGTDADLRRLS++
Sbjct: 946 CLLEVTGVADPTGCGEGFSYVKIPNKPTQQ----KDDKEPQPVKKTVTGTDADLRRLSLK 1001
Query: 1019 AAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------VQLQQQ 1063
A+++L KF VPEE I K +RW I ++R +S+EQA SG + Q++
Sbjct: 1002 NAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSKFARGSRFSVAEHQER 1061
Query: 1064 TRGKCQEIWDRQVQSLSAAD---DDEIGSDSEHSDLDSFAGDLENLL 1107
+ +CQ I+D Q + LS+ + D S +E SD + ++EN+L
Sbjct: 1062 YKEECQRIFDLQNKVLSSTEVLSTDTDSSSAEDSDFEEMGKNIENML 1108
>gi|355757456|gb|EHH60981.1| hypothetical protein EGM_18887, partial [Macaca fascicularis]
Length = 1849
Score = 259 bits (663), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 170/489 (34%), Positives = 249/489 (50%), Gaps = 54/489 (11%)
Query: 654 FKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCL 713
+ DL+ KDG + L EY EE L+ GM + YY K PG GA C
Sbjct: 608 MRTPQDLTGKDGDLILAEYSEENGPLMMQVGMATKIKNYY-KRKPGKDPGAPDCK----Y 662
Query: 714 GNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRR 773
G + SPFLG + G + E N++RAP++ HK+ TDFL++R+ +G IR
Sbjct: 663 GETVYCH---TSPFLGSLHPGQLLQAFENNLFRAPIYLHKMPETDFLIIRTRQG-YYIRE 718
Query: 774 IDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQ 833
+ + VV QQ PL EV P SK T+ + + V +YR F + R I ++++
Sbjct: 719 LVDIFVVGQQCPLFEVPGPNSKRANTHIRDFLQVFIYRLFWKSKDRPRR--IRMEDIKKA 776
Query: 834 FPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQA 893
FP+ SE+ IRK+LK CA +R G W +K F +P+E ++R + PE C+Y SM A
Sbjct: 777 FPSHSESSIRKRLKLCADFKRTGMDSNWWVLKSDFRLPTEEEIRAMVSPEQCCAYYSMIA 836
Query: 894 GLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQ 953
RLK G + + A P+E I+ E++ PWN + F+A
Sbjct: 837 AEQRLKDAGYGEKSFFA---------PEEENEEDFQMKIDDEVRTAPWNTTRAFIAAM-- 885
Query: 954 DRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLR 1013
+ LE+TGV DP+G G GFSYV+ K + K TVTGTDADLR
Sbjct: 886 --KGKCLLEVTGVADPTGCGEGFSYVKIPNKPTQQ----KDDKEPQPVKKTVTGTDADLR 939
Query: 1014 RLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------V 1058
RLS++ A+++L KF VPEE I K +RW I ++R +S+EQA SG
Sbjct: 940 RLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSKFARGSRFSVA 999
Query: 1059 QLQQQTRGKCQEIWDRQVQSLSAAD---DDEIGSDSEHSDLDSFAGDLENLLD------- 1108
+ Q++ + +CQ I+D Q + LS+ + D S +E SD + ++EN+L
Sbjct: 1000 EHQERYKEECQRIFDLQNKVLSSTEVLSTDTDSSSAEDSDFEEMGKNIENMLQNKKTSSQ 1059
Query: 1109 -AEEFEEEE 1116
+ E+EE+E
Sbjct: 1060 LSREWEEQE 1068
Score = 40.8 bits (94), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 9/58 (15%)
Query: 521 FSKHSLQNRDMMEGSWLDNIIWEPVDAVGKPKLI------LDLQDEQMLFEILDNKDD 572
+S + N D++ G W DNIIW DA P+L+ LD DE ++ EI D K++
Sbjct: 408 YSIFPIDNEDLVYGRWEDNIIW---DAQAMPRLLEPPVLTLDPNDENLILEIPDEKEE 462
>gi|402897210|ref|XP_003919745.1| PREDICTED: LOW QUALITY PROTEIN: transcription initiation factor TFIID
subunit 1-like [Papio anubis]
Length = 1809
Score = 259 bits (663), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 171/484 (35%), Positives = 248/484 (51%), Gaps = 54/484 (11%)
Query: 659 DLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLT 718
DL+ KDG + L EY EE L+ GM + YY K PG GA C G +
Sbjct: 670 DLTGKDGDLILAEYSEENGPLMMQVGMATKIKNYY-KRKPGKDPGAPDCK----YGETVY 724
Query: 719 LEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRRIDKVA 778
SPFLG + G + E N++RAP++ HK+ TDFL++R+ +G IR + +
Sbjct: 725 CH---TSPFLGSLHPGQLLQAFENNLFRAPIYLHKMPETDFLIIRTRQG-YYIRELVDIF 780
Query: 779 VVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLS 838
VV QQ PL EV P SK T+ + + V +YR F + R I ++++ FP+ S
Sbjct: 781 VVGQQCPLFEVPGPNSKRANTHIRDFLQVFIYRLFWKSKDRPRR--IRMEDIKKAFPSHS 838
Query: 839 EAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRL 898
E+ IRK+LK CA +R G W +K F +P+E ++R + PE C+Y SM A RL
Sbjct: 839 ESSIRKRLKLCADFKRTGMDSNWWVLKSDFRLPTEEEIRAMVSPEQCCAYYSMIAAEQRL 898
Query: 899 KHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENI 958
K G + + A P+E I+ E+ PWN + F+A +
Sbjct: 899 KDAGYGEKSFFA---------PEEENEEDFQMKIDDEVHTAPWNTTRAFIAAM----KGK 945
Query: 959 ERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLRRLSME 1018
LE+TGV DP+G G GFSYV+ P K+ A + TVTGTDADLRRLS++
Sbjct: 946 CLLEVTGVADPTGCGEGFSYVKI-PNKPTQQKDDKEPQAVKK---TVTGTDADLRRLSLK 1001
Query: 1019 AAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------VQLQQQ 1063
A+++L KF VPEE I K +RW I ++R +S+EQA SG + Q++
Sbjct: 1002 NAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSKFARGSRFSVAEHQER 1061
Query: 1064 TRGKCQEIWDRQVQSLSAAD---DDEIGSDSEHSDLDSFAGDLENLLD--------AEEF 1112
+ +CQ I+D Q + LS+ + D S +E SD + +EN+L + E+
Sbjct: 1062 YKEECQRIFDLQNKVLSSTEVLSSDTDSSSAEDSDFEEMGKSIENMLQNKKTSSQLSREW 1121
Query: 1113 EEEE 1116
EE+E
Sbjct: 1122 EEQE 1125
Score = 40.8 bits (94), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 9/58 (15%)
Query: 521 FSKHSLQNRDMMEGSWLDNIIWEPVDAVGKPKLI------LDLQDEQMLFEILDNKDD 572
+S + N D++ G W DNIIW DA P+L+ LD DE ++ EI D K++
Sbjct: 465 YSIFPIDNEDLVYGRWEDNIIW---DAQAMPRLLEPPVLTLDPNDENLILEIPDEKEE 519
>gi|297304118|ref|XP_002808585.1| PREDICTED: LOW QUALITY PROTEIN: transcription initiation factor TFIID
subunit 1-like [Macaca mulatta]
Length = 1839
Score = 259 bits (662), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 200/660 (30%), Positives = 303/660 (45%), Gaps = 110/660 (16%)
Query: 521 FSKHSLQNRDMMEGSWLDNIIWEPVDAVGKPKLI------LDLQDEQMLFEILDNKDD-- 572
+S + N D++ G W DNIIW DA P+L+ LD DE ++ EI D K++
Sbjct: 474 YSIFPIDNEDLVYGRWEDNIIW---DAQAMPRLLEPPVITLDPNDENLILEIPDEKEEAT 530
Query: 573 ---------------EHPLLHAGAMIITRSAKPSDFKP-------AESVKLFY------- 603
+ +L +I + + +P + + +Y
Sbjct: 531 SNSPSKESKKESSLKKSRILLGKTGVIKEEPQQNMSQPEVKDPWNLSNDEYYYPKQQGLR 590
Query: 604 --LGKELEDHKSLADQNVRPNSLIHLIRTKIHLLPRAQKLPGENKSLRPPGAFKKKSDLS 661
G + H A + +P H+ K+ R P +NK R +++ +
Sbjct: 591 GTFGGNIIQHSIPAVELRQPFFPTHMGPIKLRQFHRP---PLKNKVYR---KMREQERQA 644
Query: 662 VKDGHVFLM----------------EYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGAL 705
G +F M EY EE L+ GM + YY K PG GA
Sbjct: 645 SGGGEMFFMRTPQDLTGKDGDLILAEYSEENGPLMMQVGMATKIKNYY-KRKPGKDPGAP 703
Query: 706 LCSGNNCLGNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSA 765
C G + SPFLG + G + E N++RAP++ HK+ TDFL++R+
Sbjct: 704 DCK----YGETVYCH---TSPFLGSLHPGQLLQAFENNLFRAPIYLHKMPETDFLIIRTR 756
Query: 766 KGKISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCI 825
+G IR + + VV QQ PL EV P SK T+ + + V +YR F + R I
Sbjct: 757 QG-YYIRELVDIFVVGQQCPLFEVPGPNSKRANTHIRDFLQVFIYRLFWKSKDRPRR--I 813
Query: 826 GVDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHV 885
++++ FP+ SE+ IRK+LK CA +R G W +K F +P+E ++R + PE
Sbjct: 814 RMEDIKKAFPSHSESSIRKRLKLCADFKRTGMDSNWWVLKSDFRLPTEEEIRAMVSPEQC 873
Query: 886 CSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSS 945
C+Y SM A RLK G + + A P+E I+ E++ PWN +
Sbjct: 874 CAYYSMIAAEQRLKDAGYGEKSFFA---------PEEENEEDFQMKIDDEVRTAPWNTTR 924
Query: 946 NFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTV 1005
F+A + LE+TGV DP+G G GFSYV+ K + K TV
Sbjct: 925 AFIAAM----KGKCLLEVTGVADPTGCGEGFSYVKIPNKPTQQ----KDDKEPQPVKKTV 976
Query: 1006 TGTDADLRRLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG-------- 1057
TGTDADLRRLS++ A+++L KF VPEE I K +RW I ++R +S+EQA SG
Sbjct: 977 TGTDADLRRLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSKFA 1036
Query: 1058 -------VQLQQQTRGKCQEIWDRQVQSLSAAD---DDEIGSDSEHSDLDSFAGDLENLL 1107
+ Q++ + +CQ I+D Q + LS+ + D S +E SD + ++EN+L
Sbjct: 1037 RGSRFSVAEHQERYKEECQRIFDLQNKVLSSTEVLSTDTDSSSAEDSDFEEMGKNIENML 1096
>gi|355564142|gb|EHH20642.1| hypothetical protein EGK_03536, partial [Macaca mulatta]
Length = 1849
Score = 259 bits (662), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 166/472 (35%), Positives = 242/472 (51%), Gaps = 46/472 (9%)
Query: 654 FKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCL 713
+ DL+ KDG + L EY EE L+ GM + YY K PG GA C
Sbjct: 608 MRTPQDLTGKDGDLILAEYSEENGPLMMQVGMATKIKNYY-KRKPGKDPGAPDCK----Y 662
Query: 714 GNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRR 773
G + SPFLG + G + E N++RAP++ HK+ TDFL++R+ +G IR
Sbjct: 663 GETVYCH---TSPFLGSLHPGQLLQAFENNLFRAPIYLHKMPETDFLIIRTRQG-YYIRE 718
Query: 774 IDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQ 833
+ + VV QQ PL EV P SK T+ + + V +YR F + R I ++++
Sbjct: 719 LVDIFVVGQQCPLFEVPGPNSKRANTHIRDFLQVFIYRLFWKSKDRPRR--IRMEDIKKA 776
Query: 834 FPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQA 893
FP+ SE+ IRK+LK CA +R G W +K F +P+E ++R + PE C+Y SM A
Sbjct: 777 FPSHSESSIRKRLKLCADFKRTGMDSNWWVLKSDFRLPTEEEIRAMVSPEQCCAYYSMIA 836
Query: 894 GLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQ 953
RLK G + + A P+E I+ E++ PWN + F+A
Sbjct: 837 AEQRLKDAGYGEKSFFA---------PEEENEEDFQMKIDDEVRTAPWNTTRAFIAAM-- 885
Query: 954 DRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLR 1013
+ LE+TGV DP+G G GFSYV+ K + K TVTGTDADLR
Sbjct: 886 --KGKCLLEVTGVADPTGCGEGFSYVKIPNKPTQQ----KDDKEPQPVKKTVTGTDADLR 939
Query: 1014 RLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------V 1058
RLS++ A+++L KF VPEE I K +RW I ++R +S+EQA SG
Sbjct: 940 RLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSKFARGSRFSVA 999
Query: 1059 QLQQQTRGKCQEIWDRQVQSLSAAD---DDEIGSDSEHSDLDSFAGDLENLL 1107
+ Q++ + +CQ I+D Q + LS+ + D S +E SD + ++EN+L
Sbjct: 1000 EHQERYKEECQRIFDLQNKVLSSTEVLSTDTDSSSAEDSDFEEMGKNIENML 1051
Score = 40.8 bits (94), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 9/58 (15%)
Query: 521 FSKHSLQNRDMMEGSWLDNIIWEPVDAVGKPKLI------LDLQDEQMLFEILDNKDD 572
+S + N D++ G W DNIIW DA P+L+ LD DE ++ EI D K++
Sbjct: 408 YSIFPIDNEDLVYGRWEDNIIW---DAQAMPRLLEPPVLTLDPNDENLILEIPDEKEE 462
>gi|440901879|gb|ELR52745.1| Transcription initiation factor TFIID subunit 1, partial [Bos
grunniens mutus]
Length = 1879
Score = 259 bits (662), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 166/472 (35%), Positives = 242/472 (51%), Gaps = 46/472 (9%)
Query: 654 FKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCL 713
+ DL+ KDG + L EY EE L+ GM + YY K PG GA C
Sbjct: 639 MRTPQDLTGKDGDLILAEYSEENGPLMMQVGMATKIKNYY-KRKPGKDPGAPDCK----Y 693
Query: 714 GNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRR 773
G + SPFLG + G + E N++RAP++ HK+ TDFL++R+ +G IR
Sbjct: 694 GETVYCH---TSPFLGSLHPGQLLQAFENNLFRAPIYLHKMPETDFLIIRTRQG-YYIRE 749
Query: 774 IDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQ 833
+ + VV QQ PL EV P SK T+ + + V +YR F + R I ++++
Sbjct: 750 LVDIFVVGQQCPLFEVPGPNSKRANTHIRDFLQVFIYRLFWKSKDRPRR--IRMEDIKKA 807
Query: 834 FPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQA 893
FP+ SE+ IRK+LK CA +R G W +K F +P+E ++R + PE C+Y SM A
Sbjct: 808 FPSHSESSIRKRLKLCADFKRTGMDSNWWVLKSDFRLPTEEEIRAMVSPEQCCAYYSMIA 867
Query: 894 GLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQ 953
RLK G + + A P+E I+ E++ PWN + F+A
Sbjct: 868 AEQRLKDAGYGEKSFFA---------PEEENEEDFQMKIDDEVRTAPWNTTRAFIAAM-- 916
Query: 954 DRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLR 1013
+ LE+TGV DP+G G GFSYV+ K + K TVTGTDADLR
Sbjct: 917 --KGKCLLEVTGVADPTGCGEGFSYVKIPNKPTQQ----KDDKEPQPVKKTVTGTDADLR 970
Query: 1014 RLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------V 1058
RLS++ A+++L KF VPEE I K +RW I ++R +S+EQA SG
Sbjct: 971 RLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSKFARGSRFSVA 1030
Query: 1059 QLQQQTRGKCQEIWDRQVQSLSAAD---DDEIGSDSEHSDLDSFAGDLENLL 1107
+ Q++ + +CQ I+D Q + LS+ + D S +E SD + ++EN+L
Sbjct: 1031 EHQERYKEECQRIFDLQNKVLSSTEILSTDTDSSSAEDSDFEEMGKNIENML 1082
>gi|380809744|gb|AFE76747.1| transcription initiation factor TFIID subunit 1 isoform 1 [Macaca
mulatta]
gi|383415887|gb|AFH31157.1| transcription initiation factor TFIID subunit 1 isoform 1 [Macaca
mulatta]
Length = 1927
Score = 259 bits (661), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 166/472 (35%), Positives = 242/472 (51%), Gaps = 46/472 (9%)
Query: 654 FKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCL 713
+ DL+ KDG + L EY EE L+ GM + YY K PG GA C
Sbjct: 686 MRTPQDLTGKDGDLILAEYSEENGPLMMQVGMATKIKNYY-KRKPGKDPGAPDCK----Y 740
Query: 714 GNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRR 773
G + SPFLG + G + E N++RAP++ HK+ TDFL++R+ +G IR
Sbjct: 741 GETVYCH---TSPFLGSLHPGQLLQAFENNLFRAPIYLHKMPETDFLIIRTRQG-YYIRE 796
Query: 774 IDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQ 833
+ + VV QQ PL EV P SK T+ + + V +YR F + R I ++++
Sbjct: 797 LVDIFVVGQQCPLFEVPGPNSKRANTHIRDFLQVFIYRLFWKSKDRPRR--IRMEDIKKA 854
Query: 834 FPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQA 893
FP+ SE+ IRK+LK CA +R G W +K F +P+E ++R + PE C+Y SM A
Sbjct: 855 FPSHSESSIRKRLKLCADFKRTGMDSNWWVLKSDFRLPTEEEIRAMVSPEQCCAYYSMIA 914
Query: 894 GLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQ 953
RLK G + + A P+E I+ E++ PWN + F+A
Sbjct: 915 AEQRLKDAGYGEKSFFA---------PEEENEEDFQMKIDDEVRTAPWNTTRAFIAAM-- 963
Query: 954 DRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLR 1013
+ LE+TGV DP+G G GFSYV+ K + K TVTGTDADLR
Sbjct: 964 --KGKCLLEVTGVADPTGCGEGFSYVKIPNKPTQQ----KDDKEPQPVKKTVTGTDADLR 1017
Query: 1014 RLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------V 1058
RLS++ A+++L KF VPEE I K +RW I ++R +S+EQA SG
Sbjct: 1018 RLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSKFARGSRFSVA 1077
Query: 1059 QLQQQTRGKCQEIWDRQVQSLSAAD---DDEIGSDSEHSDLDSFAGDLENLL 1107
+ Q++ + +CQ I+D Q + LS+ + D S +E SD + ++EN+L
Sbjct: 1078 EHQERYKEECQRIFDLQNKVLSSTEVLSTDTDSSSAEDSDFEEMGKNIENML 1129
Score = 40.8 bits (94), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 9/58 (15%)
Query: 521 FSKHSLQNRDMMEGSWLDNIIWEPVDAVGKPKLI------LDLQDEQMLFEILDNKDD 572
+S + N D++ G W DNIIW DA P+L+ LD DE ++ EI D K++
Sbjct: 486 YSIFPIDNEDLVYGRWEDNIIW---DAQAMPRLLEPPVLTLDPNDENLILEIPDEKEE 540
>gi|171451946|dbj|BAG15901.1| TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated
factor, neuron specific isoform [Homo sapiens]
Length = 1895
Score = 259 bits (661), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 166/472 (35%), Positives = 242/472 (51%), Gaps = 46/472 (9%)
Query: 654 FKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCL 713
+ DL+ KDG + L EY EE L+ GM + YY K PG GA C
Sbjct: 686 MRTPQDLTGKDGDLILAEYSEENGPLMMQVGMATKIKNYY-KRKPGKDPGAPDCK----Y 740
Query: 714 GNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRR 773
G + SPFLG + G + E N++RAP++ HK+ TDFL++R+ +G IR
Sbjct: 741 GETVYCH---TSPFLGSLHPGQLLQAFENNLFRAPIYLHKMPETDFLIIRTRQG-YYIRE 796
Query: 774 IDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQ 833
+ + VV QQ PL EV P SK T+ + + V +YR F + R I ++++
Sbjct: 797 LVDIFVVGQQCPLFEVPGPNSKRANTHIRDFLQVFIYRLFWKSKDRPRR--IRMEDIKKA 854
Query: 834 FPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQA 893
FP+ SE+ IRK+LK CA +R G W +K F +P+E ++R + PE C+Y SM A
Sbjct: 855 FPSHSESSIRKRLKLCADFKRTGMDSNWWVLKSDFRLPTEEEIRAMVSPEQCCAYYSMIA 914
Query: 894 GLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQ 953
RLK G + + A P+E I+ E++ PWN + F+A
Sbjct: 915 AEQRLKDAGYGEKSFFA---------PEEENEEDFQMKIDDEVRTAPWNTTRAFIAAM-- 963
Query: 954 DRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLR 1013
+ LE+TGV DP+G G GFSYV+ K + K TVTGTDADLR
Sbjct: 964 --KGKCLLEVTGVADPTGCGEGFSYVKIPNKPTQQ----KDDKEPQPVKKTVTGTDADLR 1017
Query: 1014 RLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------V 1058
RLS++ A+++L KF VPEE I K +RW I ++R +S+EQA SG
Sbjct: 1018 RLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSKFARGSRFSVA 1077
Query: 1059 QLQQQTRGKCQEIWDRQVQSLSAAD---DDEIGSDSEHSDLDSFAGDLENLL 1107
+ Q++ + +CQ I+D Q + LS+ + D S +E SD + ++EN+L
Sbjct: 1078 EHQERYKEECQRIFDLQNKVLSSTEVLSTDTDSSSAEDSDFEEMGKNIENML 1129
Score = 40.8 bits (94), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 9/58 (15%)
Query: 521 FSKHSLQNRDMMEGSWLDNIIWEPVDAVGKPKLI------LDLQDEQMLFEILDNKDD 572
+S + N D++ G W DNIIW DA P+L+ LD DE ++ EI D K++
Sbjct: 486 YSIFPIDNEDLVYGRWEDNIIW---DAQAMPRLLEPPVLTLDPNDENLILEIPDEKEE 540
>gi|119625698|gb|EAX05293.1| TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated
factor, 250kDa, isoform CRA_c [Homo sapiens]
Length = 1927
Score = 259 bits (661), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 166/472 (35%), Positives = 242/472 (51%), Gaps = 46/472 (9%)
Query: 654 FKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCL 713
+ DL+ KDG + L EY EE L+ GM + YY K PG GA C
Sbjct: 686 MRTPQDLTGKDGDLILAEYSEENGPLMMQVGMATKIKNYY-KRKPGKDPGAPDCK----Y 740
Query: 714 GNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRR 773
G + SPFLG + G + E N++RAP++ HK+ TDFL++R+ +G IR
Sbjct: 741 GETVYCH---TSPFLGSLHPGQLLQAFENNLFRAPIYLHKMPETDFLIIRTRQG-YYIRE 796
Query: 774 IDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQ 833
+ + VV QQ PL EV P SK T+ + + V +YR F + R I ++++
Sbjct: 797 LVDIFVVGQQCPLFEVPGPNSKRANTHIRDFLQVFIYRLFWKSKDRPRR--IRMEDIKKA 854
Query: 834 FPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQA 893
FP+ SE+ IRK+LK CA +R G W +K F +P+E ++R + PE C+Y SM A
Sbjct: 855 FPSHSESSIRKRLKLCADFKRTGMDSNWWVLKSDFRLPTEEEIRAMVSPEQCCAYYSMIA 914
Query: 894 GLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQ 953
RLK G + + A P+E I+ E++ PWN + F+A
Sbjct: 915 AEQRLKDAGYGEKSFFA---------PEEENEEDFQMKIDDEVRTAPWNTTRAFIAAM-- 963
Query: 954 DRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLR 1013
+ LE+TGV DP+G G GFSYV+ K + K TVTGTDADLR
Sbjct: 964 --KGKCLLEVTGVADPTGCGEGFSYVKIPNKPTQQ----KDDKEPQPVKKTVTGTDADLR 1017
Query: 1014 RLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------V 1058
RLS++ A+++L KF VPEE I K +RW I ++R +S+EQA SG
Sbjct: 1018 RLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSKFARGSRFSVA 1077
Query: 1059 QLQQQTRGKCQEIWDRQVQSLSAAD---DDEIGSDSEHSDLDSFAGDLENLL 1107
+ Q++ + +CQ I+D Q + LS+ + D S +E SD + ++EN+L
Sbjct: 1078 EHQERYKEECQRIFDLQNKVLSSTEVLSTDTDSSSAEDSDFEEMGKNIENML 1129
Score = 40.8 bits (94), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 9/58 (15%)
Query: 521 FSKHSLQNRDMMEGSWLDNIIWEPVDAVGKPKLI------LDLQDEQMLFEILDNKDD 572
+S + N D++ G W DNIIW DA P+L+ LD DE ++ EI D K++
Sbjct: 486 YSIFPIDNEDLVYGRWEDNIIW---DAQAMPRLLEPPVLTLDPNDENLILEIPDEKEE 540
>gi|383413463|gb|AFH29945.1| transcription initiation factor TFIID subunit 1 isoform 2 [Macaca
mulatta]
Length = 1872
Score = 259 bits (661), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 166/472 (35%), Positives = 242/472 (51%), Gaps = 46/472 (9%)
Query: 654 FKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCL 713
+ DL+ KDG + L EY EE L+ GM + YY K PG GA C
Sbjct: 665 MRTPQDLTGKDGDLILAEYSEENGPLMMQVGMATKIKNYY-KRKPGKDPGAPDCK----Y 719
Query: 714 GNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRR 773
G + SPFLG + G + E N++RAP++ HK+ TDFL++R+ +G IR
Sbjct: 720 GETVYCH---TSPFLGSLHPGQLLQAFENNLFRAPIYLHKMPETDFLIIRTRQG-YYIRE 775
Query: 774 IDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQ 833
+ + VV QQ PL EV P SK T+ + + V +YR F + R I ++++
Sbjct: 776 LVDIFVVGQQCPLFEVPGPNSKRANTHIRDFLQVFIYRLFWKSKDRPRR--IRMEDIKKA 833
Query: 834 FPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQA 893
FP+ SE+ IRK+LK CA +R G W +K F +P+E ++R + PE C+Y SM A
Sbjct: 834 FPSHSESSIRKRLKLCADFKRTGMDSNWWVLKSDFRLPTEEEIRAMVSPEQCCAYYSMIA 893
Query: 894 GLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQ 953
RLK G + + A P+E I+ E++ PWN + F+A
Sbjct: 894 AEQRLKDAGYGEKSFFA---------PEEENEEDFQMKIDDEVRTAPWNTTRAFIAAM-- 942
Query: 954 DRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLR 1013
+ LE+TGV DP+G G GFSYV+ K + K TVTGTDADLR
Sbjct: 943 --KGKCLLEVTGVADPTGCGEGFSYVKIPNKPTQQ----KDDKEPQPVKKTVTGTDADLR 996
Query: 1014 RLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------V 1058
RLS++ A+++L KF VPEE I K +RW I ++R +S+EQA SG
Sbjct: 997 RLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSKFARGSRFSVA 1056
Query: 1059 QLQQQTRGKCQEIWDRQVQSLSAAD---DDEIGSDSEHSDLDSFAGDLENLL 1107
+ Q++ + +CQ I+D Q + LS+ + D S +E SD + ++EN+L
Sbjct: 1057 EHQERYKEECQRIFDLQNKVLSSTEVLSTDTDSSSAEDSDFEEMGKNIENML 1108
Score = 40.8 bits (94), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 9/58 (15%)
Query: 521 FSKHSLQNRDMMEGSWLDNIIWEPVDAVGKPKLI------LDLQDEQMLFEILDNKDD 572
+S + N D++ G W DNIIW DA P+L+ LD DE ++ EI D K++
Sbjct: 465 YSIFPIDNEDLVYGRWEDNIIW---DAQAMPRLLEPPVLTLDPNDENLILEIPDEKEE 519
>gi|74007662|ref|XP_849327.1| PREDICTED: transcription initiation factor TFIID subunit 1 isoform 2
[Canis lupus familiaris]
Length = 1871
Score = 259 bits (661), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 166/472 (35%), Positives = 242/472 (51%), Gaps = 46/472 (9%)
Query: 654 FKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCL 713
+ DL+ KDG + L EY EE L+ GM + YY K PG GA C
Sbjct: 665 MRTPQDLTGKDGDLILAEYSEENGPLMMQVGMATKIKNYY-KRKPGKDPGAPDCK----Y 719
Query: 714 GNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRR 773
G + SPFLG + G + E N++RAP++ HK+ TDFL++R+ +G IR
Sbjct: 720 GETVYCH---TSPFLGSLHPGQLLQAFENNLFRAPIYLHKMPETDFLIIRTRQG-YYIRE 775
Query: 774 IDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQ 833
+ + VV QQ PL EV P SK T+ + + V +YR F + R I ++++
Sbjct: 776 LVDIFVVGQQCPLFEVPGPNSKRANTHIRDFLQVFIYRLFWKSKDRPRR--IRMEDIKKA 833
Query: 834 FPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQA 893
FP+ SE+ IRK+LK CA +R G W +K F +P+E ++R + PE C+Y SM A
Sbjct: 834 FPSHSESSIRKRLKLCADFKRTGMDSNWWVLKSDFRLPTEEEIRAMVSPEQCCAYYSMIA 893
Query: 894 GLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQ 953
RLK G + + A P+E I+ E++ PWN + F+A
Sbjct: 894 AEQRLKDAGYGEKSFFA---------PEEENEEDFQMKIDDEVRTAPWNTTRAFIAAM-- 942
Query: 954 DRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLR 1013
+ LE+TGV DP+G G GFSYV+ K + K TVTGTDADLR
Sbjct: 943 --KGKCLLEVTGVADPTGCGEGFSYVKIPNKPTQQ----KDDKEPQPVKKTVTGTDADLR 996
Query: 1014 RLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------V 1058
RLS++ A+++L KF VPEE I K +RW I ++R +S+EQA SG
Sbjct: 997 RLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSKFARGSRFSVA 1056
Query: 1059 QLQQQTRGKCQEIWDRQVQSLSAAD---DDEIGSDSEHSDLDSFAGDLENLL 1107
+ Q++ + +CQ I+D Q + LS+ + D S +E SD + ++EN+L
Sbjct: 1057 EHQERYKEECQRIFDLQNKVLSSTEILSTDTDSSSAEDSDFEEMGKNIENML 1108
>gi|20357585|ref|NP_004597.2| transcription initiation factor TFIID subunit 1 isoform 1 [Homo
sapiens]
gi|47777655|gb|AAT38105.1| TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated
factor, 250kDa [Homo sapiens]
gi|119625699|gb|EAX05294.1| TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated
factor, 250kDa, isoform CRA_d [Homo sapiens]
Length = 1893
Score = 259 bits (661), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 166/472 (35%), Positives = 242/472 (51%), Gaps = 46/472 (9%)
Query: 654 FKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCL 713
+ DL+ KDG + L EY EE L+ GM + YY K PG GA C
Sbjct: 686 MRTPQDLTGKDGDLILAEYSEENGPLMMQVGMATKIKNYY-KRKPGKDPGAPDCK----Y 740
Query: 714 GNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRR 773
G + SPFLG + G + E N++RAP++ HK+ TDFL++R+ +G IR
Sbjct: 741 GETVYCH---TSPFLGSLHPGQLLQAFENNLFRAPIYLHKMPETDFLIIRTRQG-YYIRE 796
Query: 774 IDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQ 833
+ + VV QQ PL EV P SK T+ + + V +YR F + R I ++++
Sbjct: 797 LVDIFVVGQQCPLFEVPGPNSKRANTHIRDFLQVFIYRLFWKSKDRPRR--IRMEDIKKA 854
Query: 834 FPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQA 893
FP+ SE+ IRK+LK CA +R G W +K F +P+E ++R + PE C+Y SM A
Sbjct: 855 FPSHSESSIRKRLKLCADFKRTGMDSNWWVLKSDFRLPTEEEIRAMVSPEQCCAYYSMIA 914
Query: 894 GLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQ 953
RLK G + + A P+E I+ E++ PWN + F+A
Sbjct: 915 AEQRLKDAGYGEKSFFA---------PEEENEEDFQMKIDDEVRTAPWNTTRAFIAAM-- 963
Query: 954 DRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLR 1013
+ LE+TGV DP+G G GFSYV+ K + K TVTGTDADLR
Sbjct: 964 --KGKCLLEVTGVADPTGCGEGFSYVKIPNKPTQQ----KDDKEPQPVKKTVTGTDADLR 1017
Query: 1014 RLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------V 1058
RLS++ A+++L KF VPEE I K +RW I ++R +S+EQA SG
Sbjct: 1018 RLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSKFARGSRFSVA 1077
Query: 1059 QLQQQTRGKCQEIWDRQVQSLSAAD---DDEIGSDSEHSDLDSFAGDLENLL 1107
+ Q++ + +CQ I+D Q + LS+ + D S +E SD + ++EN+L
Sbjct: 1078 EHQERYKEECQRIFDLQNKVLSSTEVLSTDTDSSSAEDSDFEEMGKNIENML 1129
Score = 40.8 bits (94), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 9/58 (15%)
Query: 521 FSKHSLQNRDMMEGSWLDNIIWEPVDAVGKPKLI------LDLQDEQMLFEILDNKDD 572
+S + N D++ G W DNIIW DA P+L+ LD DE ++ EI D K++
Sbjct: 486 YSIFPIDNEDLVYGRWEDNIIW---DAQAMPRLLEPPVLTLDPNDENLILEIPDEKEE 540
>gi|194228018|ref|XP_001493242.2| PREDICTED: transcription initiation factor TFIID subunit 1 isoform 1
[Equus caballus]
Length = 1872
Score = 259 bits (661), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 166/472 (35%), Positives = 242/472 (51%), Gaps = 46/472 (9%)
Query: 654 FKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCL 713
+ DL+ KDG + L EY EE L+ GM + YY K PG GA C
Sbjct: 665 MRTPQDLTGKDGDLILAEYSEENGPLMMQVGMATKIKNYY-KRKPGKDPGAPDCK----Y 719
Query: 714 GNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRR 773
G + SPFLG + G + E N++RAP++ HK+ TDFL++R+ +G IR
Sbjct: 720 GETVYCH---TSPFLGSLHPGQLLQAFENNLFRAPIYLHKMPETDFLIIRTRQG-YYIRE 775
Query: 774 IDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQ 833
+ + VV QQ PL EV P SK T+ + + V +YR F + R I ++++
Sbjct: 776 LVDIFVVGQQCPLFEVPGPNSKRANTHIRDFLQVFIYRLFWKSKDRPRR--IRMEDIKKA 833
Query: 834 FPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQA 893
FP+ SE+ IRK+LK CA +R G W +K F +P+E ++R + PE C+Y SM A
Sbjct: 834 FPSHSESSIRKRLKLCADFKRTGMDSNWWVLKSDFRLPTEEEIRAMVSPEQCCAYYSMIA 893
Query: 894 GLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQ 953
RLK G + + A P+E I+ E++ PWN + F+A
Sbjct: 894 AEQRLKDAGYGEKSFFA---------PEEENEEDFQMKIDDEVRTAPWNTTRAFIAAM-- 942
Query: 954 DRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLR 1013
+ LE+TGV DP+G G GFSYV+ K + K TVTGTDADLR
Sbjct: 943 --KGKCLLEVTGVADPTGCGEGFSYVKIPNKPTQQ----KDDKEPQPVKKTVTGTDADLR 996
Query: 1014 RLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------V 1058
RLS++ A+++L KF VPEE I K +RW I ++R +S+EQA SG
Sbjct: 997 RLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSKFARGSRFSVA 1056
Query: 1059 QLQQQTRGKCQEIWDRQVQSLSAAD---DDEIGSDSEHSDLDSFAGDLENLL 1107
+ Q++ + +CQ I+D Q + LS+ + D S +E SD + ++EN+L
Sbjct: 1057 EHQERYKEECQRIFDLQNKVLSSTEVLSTDTDSSSAEDSDFEEMGKNIENML 1108
>gi|20357588|ref|NP_620278.1| transcription initiation factor TFIID subunit 1 isoform 2 [Homo
sapiens]
gi|115942|sp|P21675.2|TAF1_HUMAN RecName: Full=Transcription initiation factor TFIID subunit 1;
AltName: Full=Cell cycle gene 1 protein; AltName:
Full=TBP-associated factor 250 kDa; Short=p250; AltName:
Full=Transcription initiation factor TFIID 250 kDa
subunit; Short=TAF(II)250; Short=TAFII-250;
Short=TAFII250
gi|219528|dbj|BAA14374.1| DNA binding protein [Homo sapiens]
gi|119625697|gb|EAX05292.1| TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated
factor, 250kDa, isoform CRA_b [Homo sapiens]
gi|225000826|gb|AAI72427.1| TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated
factor, 250kDa [synthetic construct]
Length = 1872
Score = 259 bits (661), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 166/472 (35%), Positives = 242/472 (51%), Gaps = 46/472 (9%)
Query: 654 FKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCL 713
+ DL+ KDG + L EY EE L+ GM + YY K PG GA C
Sbjct: 665 MRTPQDLTGKDGDLILAEYSEENGPLMMQVGMATKIKNYY-KRKPGKDPGAPDCK----Y 719
Query: 714 GNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRR 773
G + SPFLG + G + E N++RAP++ HK+ TDFL++R+ +G IR
Sbjct: 720 GETVYCH---TSPFLGSLHPGQLLQAFENNLFRAPIYLHKMPETDFLIIRTRQG-YYIRE 775
Query: 774 IDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQ 833
+ + VV QQ PL EV P SK T+ + + V +YR F + R I ++++
Sbjct: 776 LVDIFVVGQQCPLFEVPGPNSKRANTHIRDFLQVFIYRLFWKSKDRPRR--IRMEDIKKA 833
Query: 834 FPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQA 893
FP+ SE+ IRK+LK CA +R G W +K F +P+E ++R + PE C+Y SM A
Sbjct: 834 FPSHSESSIRKRLKLCADFKRTGMDSNWWVLKSDFRLPTEEEIRAMVSPEQCCAYYSMIA 893
Query: 894 GLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQ 953
RLK G + + A P+E I+ E++ PWN + F+A
Sbjct: 894 AEQRLKDAGYGEKSFFA---------PEEENEEDFQMKIDDEVRTAPWNTTRAFIAAM-- 942
Query: 954 DRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLR 1013
+ LE+TGV DP+G G GFSYV+ K + K TVTGTDADLR
Sbjct: 943 --KGKCLLEVTGVADPTGCGEGFSYVKIPNKPTQQ----KDDKEPQPVKKTVTGTDADLR 996
Query: 1014 RLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------V 1058
RLS++ A+++L KF VPEE I K +RW I ++R +S+EQA SG
Sbjct: 997 RLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSKFARGSRFSVA 1056
Query: 1059 QLQQQTRGKCQEIWDRQVQSLSAAD---DDEIGSDSEHSDLDSFAGDLENLL 1107
+ Q++ + +CQ I+D Q + LS+ + D S +E SD + ++EN+L
Sbjct: 1057 EHQERYKEECQRIFDLQNKVLSSTEVLSTDTDSSSAEDSDFEEMGKNIENML 1108
Score = 40.8 bits (94), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 9/58 (15%)
Query: 521 FSKHSLQNRDMMEGSWLDNIIWEPVDAVGKPKLI------LDLQDEQMLFEILDNKDD 572
+S + N D++ G W DNIIW DA P+L+ LD DE ++ EI D K++
Sbjct: 465 YSIFPIDNEDLVYGRWEDNIIW---DAQAMPRLLEPPVLTLDPNDENLILEIPDEKEE 519
>gi|380788391|gb|AFE66071.1| transcription initiation factor TFIID subunit 1 isoform 1 [Macaca
mulatta]
gi|383413465|gb|AFH29946.1| transcription initiation factor TFIID subunit 1 isoform 1 [Macaca
mulatta]
Length = 1893
Score = 259 bits (661), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 166/472 (35%), Positives = 242/472 (51%), Gaps = 46/472 (9%)
Query: 654 FKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCL 713
+ DL+ KDG + L EY EE L+ GM + YY K PG GA C
Sbjct: 686 MRTPQDLTGKDGDLILAEYSEENGPLMMQVGMATKIKNYY-KRKPGKDPGAPDCK----Y 740
Query: 714 GNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRR 773
G + SPFLG + G + E N++RAP++ HK+ TDFL++R+ +G IR
Sbjct: 741 GETVYCH---TSPFLGSLHPGQLLQAFENNLFRAPIYLHKMPETDFLIIRTRQG-YYIRE 796
Query: 774 IDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQ 833
+ + VV QQ PL EV P SK T+ + + V +YR F + R I ++++
Sbjct: 797 LVDIFVVGQQCPLFEVPGPNSKRANTHIRDFLQVFIYRLFWKSKDRPRR--IRMEDIKKA 854
Query: 834 FPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQA 893
FP+ SE+ IRK+LK CA +R G W +K F +P+E ++R + PE C+Y SM A
Sbjct: 855 FPSHSESSIRKRLKLCADFKRTGMDSNWWVLKSDFRLPTEEEIRAMVSPEQCCAYYSMIA 914
Query: 894 GLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQ 953
RLK G + + A P+E I+ E++ PWN + F+A
Sbjct: 915 AEQRLKDAGYGEKSFFA---------PEEENEEDFQMKIDDEVRTAPWNTTRAFIAAM-- 963
Query: 954 DRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLR 1013
+ LE+TGV DP+G G GFSYV+ K + K TVTGTDADLR
Sbjct: 964 --KGKCLLEVTGVADPTGCGEGFSYVKIPNKPTQQ----KDDKEPQPVKKTVTGTDADLR 1017
Query: 1014 RLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------V 1058
RLS++ A+++L KF VPEE I K +RW I ++R +S+EQA SG
Sbjct: 1018 RLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSKFARGSRFSVA 1077
Query: 1059 QLQQQTRGKCQEIWDRQVQSLSAAD---DDEIGSDSEHSDLDSFAGDLENLL 1107
+ Q++ + +CQ I+D Q + LS+ + D S +E SD + ++EN+L
Sbjct: 1078 EHQERYKEECQRIFDLQNKVLSSTEVLSTDTDSSSAEDSDFEEMGKNIENML 1129
Score = 40.8 bits (94), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 9/58 (15%)
Query: 521 FSKHSLQNRDMMEGSWLDNIIWEPVDAVGKPKLI------LDLQDEQMLFEILDNKDD 572
+S + N D++ G W DNIIW DA P+L+ LD DE ++ EI D K++
Sbjct: 486 YSIFPIDNEDLVYGRWEDNIIW---DAQAMPRLLEPPVLTLDPNDENLILEIPDEKEE 540
>gi|410210500|gb|JAA02469.1| TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated
factor, 250kDa [Pan troglodytes]
gi|410210502|gb|JAA02470.1| TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated
factor, 250kDa [Pan troglodytes]
Length = 1893
Score = 259 bits (661), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 166/472 (35%), Positives = 242/472 (51%), Gaps = 46/472 (9%)
Query: 654 FKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCL 713
+ DL+ KDG + L EY EE L+ GM + YY K PG GA C
Sbjct: 686 MRTPQDLTGKDGDLILAEYSEENGPLMMQVGMATKIKNYY-KRKPGKDPGAPDCK----Y 740
Query: 714 GNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRR 773
G + SPFLG + G + E N++RAP++ HK+ TDFL++R+ +G IR
Sbjct: 741 GETVYCH---TSPFLGSLHPGQLLQAFENNLFRAPIYLHKMPETDFLIIRTRQG-YYIRE 796
Query: 774 IDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQ 833
+ + VV QQ PL EV P SK T+ + + V +YR F + R I ++++
Sbjct: 797 LVDIFVVGQQCPLFEVPGPNSKRANTHIRDFLQVFIYRLFWKSKDRPRR--IRMEDIKKA 854
Query: 834 FPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQA 893
FP+ SE+ IRK+LK CA +R G W +K F +P+E ++R + PE C+Y SM A
Sbjct: 855 FPSHSESSIRKRLKLCADFKRTGMDSNWWVLKSDFRLPTEEEIRAMVSPEQCCAYYSMIA 914
Query: 894 GLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQ 953
RLK G + + A P+E I+ E++ PWN + F+A
Sbjct: 915 AEQRLKDAGYGEKSFFA---------PEEENEEDFQMKIDDEVRTAPWNTTRAFIAAM-- 963
Query: 954 DRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLR 1013
+ LE+TGV DP+G G GFSYV+ K + K TVTGTDADLR
Sbjct: 964 --KGKCLLEVTGVADPTGCGEGFSYVKIPNKPTQQ----KDDKEPQPVKKTVTGTDADLR 1017
Query: 1014 RLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------V 1058
RLS++ A+++L KF VPEE I K +RW I ++R +S+EQA SG
Sbjct: 1018 RLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSKFARGSRFSVA 1077
Query: 1059 QLQQQTRGKCQEIWDRQVQSLSAAD---DDEIGSDSEHSDLDSFAGDLENLL 1107
+ Q++ + +CQ I+D Q + LS+ + D S +E SD + ++EN+L
Sbjct: 1078 EHQERYKEECQRIFDLQNKVLSSTEVLSTDTDSSSAEDSDFEEMGKNIENML 1129
Score = 40.8 bits (94), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 9/58 (15%)
Query: 521 FSKHSLQNRDMMEGSWLDNIIWEPVDAVGKPKLI------LDLQDEQMLFEILDNKDD 572
+S + N D++ G W DNIIW DA P+L+ LD DE ++ EI D K++
Sbjct: 486 YSIFPIDNEDLVYGRWEDNIIW---DAQAMPRLLEPPVLTLDPNDENLILEIPDEKEE 540
>gi|301787377|ref|XP_002929102.1| PREDICTED: transcription initiation factor TFIID subunit 1-like
isoform 1 [Ailuropoda melanoleuca]
gi|281340180|gb|EFB15764.1| hypothetical protein PANDA_019200 [Ailuropoda melanoleuca]
Length = 1891
Score = 259 bits (661), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 166/472 (35%), Positives = 242/472 (51%), Gaps = 46/472 (9%)
Query: 654 FKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCL 713
+ DL+ KDG + L EY EE L+ GM + YY K PG GA C
Sbjct: 685 MRTPQDLTGKDGDLILAEYSEENGPLMMQVGMATKIKNYY-KRKPGKDPGAPDCK----Y 739
Query: 714 GNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRR 773
G + SPFLG + G + E N++RAP++ HK+ TDFL++R+ +G IR
Sbjct: 740 GETVYCH---TSPFLGSLHPGQLLQAFENNLFRAPIYLHKMPETDFLIIRTRQG-YYIRE 795
Query: 774 IDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQ 833
+ + VV QQ PL EV P SK T+ + + V +YR F + R I ++++
Sbjct: 796 LVDIFVVGQQCPLFEVPGPNSKRANTHIRDFLQVFIYRLFWKSKDRPRR--IRMEDIKKA 853
Query: 834 FPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQA 893
FP+ SE+ IRK+LK CA +R G W +K F +P+E ++R + PE C+Y SM A
Sbjct: 854 FPSHSESSIRKRLKLCADFKRTGMDSNWWVLKSDFRLPTEEEIRAMVSPEQCCAYYSMIA 913
Query: 894 GLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQ 953
RLK G + + A P+E I+ E++ PWN + F+A
Sbjct: 914 AEQRLKDAGYGEKSFFA---------PEEENEEDFQMKIDDEVRTAPWNTTRAFIAAM-- 962
Query: 954 DRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLR 1013
+ LE+TGV DP+G G GFSYV+ K + K TVTGTDADLR
Sbjct: 963 --KGKCLLEVTGVADPTGCGEGFSYVKIPNKPTQQ----KDDKEPQPVKKTVTGTDADLR 1016
Query: 1014 RLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------V 1058
RLS++ A+++L KF VPEE I K +RW I ++R +S+EQA SG
Sbjct: 1017 RLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSKFARGSRFSVA 1076
Query: 1059 QLQQQTRGKCQEIWDRQVQSLSAAD---DDEIGSDSEHSDLDSFAGDLENLL 1107
+ Q++ + +CQ I+D Q + LS+ + D S +E SD + ++EN+L
Sbjct: 1077 EHQERYKEECQRIFDLQNKVLSSTEVLSTDTDSSSAEDSDFEEMGKNIENML 1128
>gi|417515756|gb|JAA53688.1| transcription initiation factor TFIID subunit 1 isoform 2 [Sus
scrofa]
Length = 1871
Score = 258 bits (660), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 166/472 (35%), Positives = 242/472 (51%), Gaps = 46/472 (9%)
Query: 654 FKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCL 713
+ DL+ KDG + L EY EE L+ GM + YY K PG GA C
Sbjct: 665 MRTPQDLTGKDGDLILAEYSEENGPLMMQVGMATKIKNYY-KRKPGKDPGAPDCK----Y 719
Query: 714 GNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRR 773
G + SPFLG + G + E N++RAP++ HK+ TDFL++R+ +G IR
Sbjct: 720 GETVYCH---TSPFLGSLHPGQLLQAFENNLFRAPIYLHKMPETDFLIIRTRQG-YYIRE 775
Query: 774 IDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQ 833
+ + VV QQ PL EV P SK T+ + + V +YR F + R I ++++
Sbjct: 776 LVDIFVVGQQCPLFEVPGPNSKRANTHIRDFLQVFIYRLFWKSKDRPRR--IRMEDIKKA 833
Query: 834 FPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQA 893
FP+ SE+ IRK+LK CA +R G W +K F +P+E ++R + PE C+Y SM A
Sbjct: 834 FPSHSESSIRKRLKLCADFKRTGMDSNWWVLKSDFRLPTEEEIRAMVSPEQCCAYYSMIA 893
Query: 894 GLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQ 953
RLK G + + A P+E I+ E++ PWN + F+A
Sbjct: 894 AEQRLKDAGYGEKSFFA---------PEEENEEDFQMKIDDEVRTAPWNTTRAFIAAM-- 942
Query: 954 DRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLR 1013
+ LE+TGV DP+G G GFSYV+ K + K TVTGTDADLR
Sbjct: 943 --KGKCLLEVTGVADPTGCGEGFSYVKIPNKPTQQ----KDDKEPQPVKKTVTGTDADLR 996
Query: 1014 RLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------V 1058
RLS++ A+++L KF VPEE I K +RW I ++R +S+EQA SG
Sbjct: 997 RLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSKFARGSRFSVA 1056
Query: 1059 QLQQQTRGKCQEIWDRQVQSLSAAD---DDEIGSDSEHSDLDSFAGDLENLL 1107
+ Q++ + +CQ I+D Q + LS+ + D S +E SD + ++EN+L
Sbjct: 1057 EHQERYKEECQRIFDLQNKVLSSTEVLSTDTDSSSAEDSDFEEMGKNIENML 1108
>gi|345807432|ref|XP_003435609.1| PREDICTED: transcription initiation factor TFIID subunit 1 [Canis
lupus familiaris]
Length = 1892
Score = 258 bits (660), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 166/472 (35%), Positives = 242/472 (51%), Gaps = 46/472 (9%)
Query: 654 FKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCL 713
+ DL+ KDG + L EY EE L+ GM + YY K PG GA C
Sbjct: 686 MRTPQDLTGKDGDLILAEYSEENGPLMMQVGMATKIKNYY-KRKPGKDPGAPDCK----Y 740
Query: 714 GNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRR 773
G + SPFLG + G + E N++RAP++ HK+ TDFL++R+ +G IR
Sbjct: 741 GETVYCH---TSPFLGSLHPGQLLQAFENNLFRAPIYLHKMPETDFLIIRTRQG-YYIRE 796
Query: 774 IDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQ 833
+ + VV QQ PL EV P SK T+ + + V +YR F + R I ++++
Sbjct: 797 LVDIFVVGQQCPLFEVPGPNSKRANTHIRDFLQVFIYRLFWKSKDRPRR--IRMEDIKKA 854
Query: 834 FPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQA 893
FP+ SE+ IRK+LK CA +R G W +K F +P+E ++R + PE C+Y SM A
Sbjct: 855 FPSHSESSIRKRLKLCADFKRTGMDSNWWVLKSDFRLPTEEEIRAMVSPEQCCAYYSMIA 914
Query: 894 GLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQ 953
RLK G + + A P+E I+ E++ PWN + F+A
Sbjct: 915 AEQRLKDAGYGEKSFFA---------PEEENEEDFQMKIDDEVRTAPWNTTRAFIAAM-- 963
Query: 954 DRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLR 1013
+ LE+TGV DP+G G GFSYV+ K + K TVTGTDADLR
Sbjct: 964 --KGKCLLEVTGVADPTGCGEGFSYVKIPNKPTQQ----KDDKEPQPVKKTVTGTDADLR 1017
Query: 1014 RLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------V 1058
RLS++ A+++L KF VPEE I K +RW I ++R +S+EQA SG
Sbjct: 1018 RLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSKFARGSRFSVA 1077
Query: 1059 QLQQQTRGKCQEIWDRQVQSLSAAD---DDEIGSDSEHSDLDSFAGDLENLL 1107
+ Q++ + +CQ I+D Q + LS+ + D S +E SD + ++EN+L
Sbjct: 1078 EHQERYKEECQRIFDLQNKVLSSTEILSTDTDSSSAEDSDFEEMGKNIENML 1129
>gi|338729260|ref|XP_003365857.1| PREDICTED: transcription initiation factor TFIID subunit 1 [Equus
caballus]
Length = 1893
Score = 258 bits (660), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 166/472 (35%), Positives = 242/472 (51%), Gaps = 46/472 (9%)
Query: 654 FKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCL 713
+ DL+ KDG + L EY EE L+ GM + YY K PG GA C
Sbjct: 686 MRTPQDLTGKDGDLILAEYSEENGPLMMQVGMATKIKNYY-KRKPGKDPGAPDCK----Y 740
Query: 714 GNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRR 773
G + SPFLG + G + E N++RAP++ HK+ TDFL++R+ +G IR
Sbjct: 741 GETVYCH---TSPFLGSLHPGQLLQAFENNLFRAPIYLHKMPETDFLIIRTRQG-YYIRE 796
Query: 774 IDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQ 833
+ + VV QQ PL EV P SK T+ + + V +YR F + R I ++++
Sbjct: 797 LVDIFVVGQQCPLFEVPGPNSKRANTHIRDFLQVFIYRLFWKSKDRPRR--IRMEDIKKA 854
Query: 834 FPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQA 893
FP+ SE+ IRK+LK CA +R G W +K F +P+E ++R + PE C+Y SM A
Sbjct: 855 FPSHSESSIRKRLKLCADFKRTGMDSNWWVLKSDFRLPTEEEIRAMVSPEQCCAYYSMIA 914
Query: 894 GLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQ 953
RLK G + + A P+E I+ E++ PWN + F+A
Sbjct: 915 AEQRLKDAGYGEKSFFA---------PEEENEEDFQMKIDDEVRTAPWNTTRAFIAAM-- 963
Query: 954 DRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLR 1013
+ LE+TGV DP+G G GFSYV+ K + K TVTGTDADLR
Sbjct: 964 --KGKCLLEVTGVADPTGCGEGFSYVKIPNKPTQQ----KDDKEPQPVKKTVTGTDADLR 1017
Query: 1014 RLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------V 1058
RLS++ A+++L KF VPEE I K +RW I ++R +S+EQA SG
Sbjct: 1018 RLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSKFARGSRFSVA 1077
Query: 1059 QLQQQTRGKCQEIWDRQVQSLSAAD---DDEIGSDSEHSDLDSFAGDLENLL 1107
+ Q++ + +CQ I+D Q + LS+ + D S +E SD + ++EN+L
Sbjct: 1078 EHQERYKEECQRIFDLQNKVLSSTEVLSTDTDSSSAEDSDFEEMGKNIENML 1129
>gi|395858958|ref|XP_003801817.1| PREDICTED: transcription initiation factor TFIID subunit 1 [Otolemur
garnettii]
Length = 1863
Score = 258 bits (660), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 166/472 (35%), Positives = 242/472 (51%), Gaps = 46/472 (9%)
Query: 654 FKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCL 713
+ DL+ KDG + L EY EE L+ GM + YY K PG GA C
Sbjct: 621 MRTPQDLTGKDGDLILAEYSEENGPLMMQVGMATKIKNYY-KRKPGKDPGAPDCK----Y 675
Query: 714 GNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRR 773
G + SPFLG + G + E N++RAP++ HK+ TDFL++R+ +G IR
Sbjct: 676 GETVYCH---TSPFLGSLHPGQLLQAFENNLFRAPIYLHKMPETDFLIIRTRQG-YYIRE 731
Query: 774 IDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQ 833
+ + VV QQ PL EV P SK T+ + + V +YR F + R I ++++
Sbjct: 732 LVDIFVVGQQCPLFEVPGPNSKRANTHIRDFLQVFIYRLFWKSKDRPRR--IRMEDIKKA 789
Query: 834 FPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQA 893
FP+ SE+ IRK+LK CA +R G W +K F +P+E ++R + PE C+Y SM A
Sbjct: 790 FPSHSESSIRKRLKLCADFKRTGMDSNWWVLKSDFRLPTEEEIRAMVSPEQCCAYYSMIA 849
Query: 894 GLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQ 953
RLK G + + A P+E I+ E++ PWN + F+A
Sbjct: 850 AEQRLKDAGYGEKSFFA---------PEEENEEDFQMKIDDEVRTAPWNTTRAFIAAM-- 898
Query: 954 DRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLR 1013
+ LE+TGV DP+G G GFSYV+ K + K TVTGTDADLR
Sbjct: 899 --KGKCLLEVTGVADPTGCGEGFSYVKIPNKPTQQ----KDDKEPQPVKKTVTGTDADLR 952
Query: 1014 RLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------V 1058
RLS++ A+++L KF VPEE I K +RW I ++R +S+EQA SG
Sbjct: 953 RLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSKFARGSRFSVA 1012
Query: 1059 QLQQQTRGKCQEIWDRQVQSLSAAD---DDEIGSDSEHSDLDSFAGDLENLL 1107
+ Q++ + +CQ I+D Q + LS+ + D S +E SD + ++EN+L
Sbjct: 1013 EHQERYKEECQRIFDLQNKVLSSTEVLSTDTDSSSAEDSDFEEMGKNIENML 1064
>gi|301787379|ref|XP_002929103.1| PREDICTED: transcription initiation factor TFIID subunit 1-like
isoform 2 [Ailuropoda melanoleuca]
Length = 1870
Score = 258 bits (660), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 166/472 (35%), Positives = 242/472 (51%), Gaps = 46/472 (9%)
Query: 654 FKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCL 713
+ DL+ KDG + L EY EE L+ GM + YY K PG GA C
Sbjct: 664 MRTPQDLTGKDGDLILAEYSEENGPLMMQVGMATKIKNYY-KRKPGKDPGAPDCK----Y 718
Query: 714 GNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRR 773
G + SPFLG + G + E N++RAP++ HK+ TDFL++R+ +G IR
Sbjct: 719 GETVYCH---TSPFLGSLHPGQLLQAFENNLFRAPIYLHKMPETDFLIIRTRQG-YYIRE 774
Query: 774 IDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQ 833
+ + VV QQ PL EV P SK T+ + + V +YR F + R I ++++
Sbjct: 775 LVDIFVVGQQCPLFEVPGPNSKRANTHIRDFLQVFIYRLFWKSKDRPRR--IRMEDIKKA 832
Query: 834 FPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQA 893
FP+ SE+ IRK+LK CA +R G W +K F +P+E ++R + PE C+Y SM A
Sbjct: 833 FPSHSESSIRKRLKLCADFKRTGMDSNWWVLKSDFRLPTEEEIRAMVSPEQCCAYYSMIA 892
Query: 894 GLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQ 953
RLK G + + A P+E I+ E++ PWN + F+A
Sbjct: 893 AEQRLKDAGYGEKSFFA---------PEEENEEDFQMKIDDEVRTAPWNTTRAFIAAM-- 941
Query: 954 DRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLR 1013
+ LE+TGV DP+G G GFSYV+ K + K TVTGTDADLR
Sbjct: 942 --KGKCLLEVTGVADPTGCGEGFSYVKIPNKPTQQ----KDDKEPQPVKKTVTGTDADLR 995
Query: 1014 RLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------V 1058
RLS++ A+++L KF VPEE I K +RW I ++R +S+EQA SG
Sbjct: 996 RLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSKFARGSRFSVA 1055
Query: 1059 QLQQQTRGKCQEIWDRQVQSLSAAD---DDEIGSDSEHSDLDSFAGDLENLL 1107
+ Q++ + +CQ I+D Q + LS+ + D S +E SD + ++EN+L
Sbjct: 1056 EHQERYKEECQRIFDLQNKVLSSTEVLSTDTDSSSAEDSDFEEMGKNIENML 1107
>gi|410988804|ref|XP_004000667.1| PREDICTED: transcription initiation factor TFIID subunit 1 isoform 1
[Felis catus]
Length = 1871
Score = 258 bits (660), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 166/472 (35%), Positives = 242/472 (51%), Gaps = 46/472 (9%)
Query: 654 FKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCL 713
+ DL+ KDG + L EY EE L+ GM + YY K PG GA C
Sbjct: 665 MRTPQDLTGKDGDLILAEYSEENGPLMMQVGMATKIKNYY-KRKPGKDPGAPDCK----Y 719
Query: 714 GNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRR 773
G + SPFLG + G + E N++RAP++ HK+ TDFL++R+ +G IR
Sbjct: 720 GETVYCH---TSPFLGSLHPGQLLQAFENNLFRAPIYLHKMPETDFLIIRTRQG-YYIRE 775
Query: 774 IDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQ 833
+ + VV QQ PL EV P SK T+ + + V +YR F + R I ++++
Sbjct: 776 LVDIFVVGQQCPLFEVPGPNSKRANTHIRDFLQVFIYRLFWKSKDRPRR--IRMEDIKKA 833
Query: 834 FPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQA 893
FP+ SE+ IRK+LK CA +R G W +K F +P+E ++R + PE C+Y SM A
Sbjct: 834 FPSHSESSIRKRLKLCADFKRTGMDSNWWVLKSDFRLPTEEEIRAMVSPEQCCAYYSMIA 893
Query: 894 GLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQ 953
RLK G + + A P+E I+ E++ PWN + F+A
Sbjct: 894 AEQRLKDAGYGEKSFFA---------PEEENEEDFQMKIDDEVRTAPWNTTRAFIAAM-- 942
Query: 954 DRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLR 1013
+ LE+TGV DP+G G GFSYV+ K + K TVTGTDADLR
Sbjct: 943 --KGKCLLEVTGVADPTGCGEGFSYVKIPNKPTQQ----KDDKEPQPVKKTVTGTDADLR 996
Query: 1014 RLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------V 1058
RLS++ A+++L KF VPEE I K +RW I ++R +S+EQA SG
Sbjct: 997 RLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSKFARGSRFSVA 1056
Query: 1059 QLQQQTRGKCQEIWDRQVQSLSAAD---DDEIGSDSEHSDLDSFAGDLENLL 1107
+ Q++ + +CQ I+D Q + LS+ + D S +E SD + ++EN+L
Sbjct: 1057 EHQERYKEECQRIFDLQNKVLSSTEVLSTDTDSSSAEDSDFEEMGKNIENML 1108
>gi|410988806|ref|XP_004000668.1| PREDICTED: transcription initiation factor TFIID subunit 1 isoform 2
[Felis catus]
Length = 1892
Score = 258 bits (660), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 166/472 (35%), Positives = 242/472 (51%), Gaps = 46/472 (9%)
Query: 654 FKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCL 713
+ DL+ KDG + L EY EE L+ GM + YY K PG GA C
Sbjct: 686 MRTPQDLTGKDGDLILAEYSEENGPLMMQVGMATKIKNYY-KRKPGKDPGAPDCK----Y 740
Query: 714 GNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRR 773
G + SPFLG + G + E N++RAP++ HK+ TDFL++R+ +G IR
Sbjct: 741 GETVYCH---TSPFLGSLHPGQLLQAFENNLFRAPIYLHKMPETDFLIIRTRQG-YYIRE 796
Query: 774 IDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQ 833
+ + VV QQ PL EV P SK T+ + + V +YR F + R I ++++
Sbjct: 797 LVDIFVVGQQCPLFEVPGPNSKRANTHIRDFLQVFIYRLFWKSKDRPRR--IRMEDIKKA 854
Query: 834 FPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQA 893
FP+ SE+ IRK+LK CA +R G W +K F +P+E ++R + PE C+Y SM A
Sbjct: 855 FPSHSESSIRKRLKLCADFKRTGMDSNWWVLKSDFRLPTEEEIRAMVSPEQCCAYYSMIA 914
Query: 894 GLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQ 953
RLK G + + A P+E I+ E++ PWN + F+A
Sbjct: 915 AEQRLKDAGYGEKSFFA---------PEEENEEDFQMKIDDEVRTAPWNTTRAFIAAM-- 963
Query: 954 DRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLR 1013
+ LE+TGV DP+G G GFSYV+ K + K TVTGTDADLR
Sbjct: 964 --KGKCLLEVTGVADPTGCGEGFSYVKIPNKPTQQ----KDDKEPQPVKKTVTGTDADLR 1017
Query: 1014 RLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------V 1058
RLS++ A+++L KF VPEE I K +RW I ++R +S+EQA SG
Sbjct: 1018 RLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSKFARGSRFSVA 1077
Query: 1059 QLQQQTRGKCQEIWDRQVQSLSAAD---DDEIGSDSEHSDLDSFAGDLENLL 1107
+ Q++ + +CQ I+D Q + LS+ + D S +E SD + ++EN+L
Sbjct: 1078 EHQERYKEECQRIFDLQNKVLSSTEVLSTDTDSSSAEDSDFEEMGKNIENML 1129
>gi|397498964|ref|XP_003820238.1| PREDICTED: transcription initiation factor TFIID subunit 1 [Pan
paniscus]
Length = 1858
Score = 258 bits (660), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 166/472 (35%), Positives = 242/472 (51%), Gaps = 46/472 (9%)
Query: 654 FKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCL 713
+ DL+ KDG + L EY EE L+ GM + YY K PG GA C
Sbjct: 686 MRTPQDLTGKDGDLILAEYSEENGPLMMQVGMATKIKNYY-KRKPGKDPGAPDCK----Y 740
Query: 714 GNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRR 773
G + SPFLG + G + E N++RAP++ HK+ TDFL++R+ +G IR
Sbjct: 741 GETVYCH---TSPFLGSLHPGQLLQAFENNLFRAPIYLHKMPETDFLIIRTRQG-YYIRE 796
Query: 774 IDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQ 833
+ + VV QQ PL EV P SK T+ + + V +YR F + R I ++++
Sbjct: 797 LVDIFVVGQQCPLFEVPGPNSKRANTHIRDFLQVFIYRLFWKSKDRPRR--IRMEDIKKA 854
Query: 834 FPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQA 893
FP+ SE+ IRK+LK CA +R G W +K F +P+E ++R + PE C+Y SM A
Sbjct: 855 FPSHSESSIRKRLKLCADFKRTGMDSNWWVLKSDFRLPTEEEIRAMVSPEQCCAYYSMIA 914
Query: 894 GLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQ 953
RLK G + + A P+E I+ E++ PWN + F+A
Sbjct: 915 AEQRLKDAGYGEKSFFA---------PEEENEEDFQMKIDDEVRTAPWNTTRAFIAAM-- 963
Query: 954 DRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLR 1013
+ LE+TGV DP+G G GFSYV+ K + K TVTGTDADLR
Sbjct: 964 --KGKCLLEVTGVADPTGCGEGFSYVKIPNKPTQQ----KDDKEPQPVKKTVTGTDADLR 1017
Query: 1014 RLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------V 1058
RLS++ A+++L KF VPEE I K +RW I ++R +S+EQA SG
Sbjct: 1018 RLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSKFARGSRFSVA 1077
Query: 1059 QLQQQTRGKCQEIWDRQVQSLSAAD---DDEIGSDSEHSDLDSFAGDLENLL 1107
+ Q++ + +CQ I+D Q + LS+ + D S +E SD + ++EN+L
Sbjct: 1078 EHQERYKEECQRIFDLQNKVLSSTEVLSTDTDSSSAEDSDFEEMGKNIENML 1129
Score = 40.8 bits (94), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 9/58 (15%)
Query: 521 FSKHSLQNRDMMEGSWLDNIIWEPVDAVGKPKLI------LDLQDEQMLFEILDNKDD 572
+S + N D++ G W DNIIW DA P+L+ LD DE ++ EI D K++
Sbjct: 486 YSIFPIDNEDLVYGRWEDNIIW---DAQAMPRLLEPPVLTLDPNDENLILEIPDEKEE 540
>gi|390479914|ref|XP_002763029.2| PREDICTED: transcription initiation factor TFIID subunit 1
[Callithrix jacchus]
Length = 1844
Score = 258 bits (660), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 166/472 (35%), Positives = 242/472 (51%), Gaps = 46/472 (9%)
Query: 654 FKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCL 713
+ DL+ KDG + L EY EE L+ GM + YY K PG GA C
Sbjct: 635 MRTPQDLTGKDGDLILAEYSEENGPLMMQVGMATKIKNYY-KRKPGKDPGAPDCK----Y 689
Query: 714 GNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRR 773
G + SPFLG + G + E N++RAP++ HK+ TDFL++R+ +G IR
Sbjct: 690 GETVYCH---TSPFLGSLHPGQLLQAFENNLFRAPIYLHKMPETDFLIIRTRQG-YYIRE 745
Query: 774 IDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQ 833
+ + VV QQ PL EV P SK T+ + + V +YR F + R I ++++
Sbjct: 746 LVDIFVVGQQCPLFEVPGPNSKRANTHIRDFLQVFIYRLFWKSKDRPRR--IRMEDIKKA 803
Query: 834 FPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQA 893
FP+ SE+ IRK+LK CA +R G W +K F +P+E ++R + PE C+Y SM A
Sbjct: 804 FPSHSESSIRKRLKLCADFKRTGMDSNWWVLKSDFRLPTEEEIRAMVSPEQCCAYYSMIA 863
Query: 894 GLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQ 953
RLK G + + A P+E I+ E++ PWN + F+A
Sbjct: 864 AEQRLKDAGYGEKSFFA---------PEEENEEDFQMKIDDEVRTAPWNTTRAFIAAM-- 912
Query: 954 DRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLR 1013
+ LE+TGV DP+G G GFSYV+ K + K TVTGTDADLR
Sbjct: 913 --KGKCLLEVTGVADPTGCGEGFSYVKIPNKPTQQ----KDDKEPQPVKKTVTGTDADLR 966
Query: 1014 RLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------V 1058
RLS++ A+++L KF VPEE I K +RW I ++R +S+EQA SG
Sbjct: 967 RLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSKFARGSRFSVA 1026
Query: 1059 QLQQQTRGKCQEIWDRQVQSLSAAD---DDEIGSDSEHSDLDSFAGDLENLL 1107
+ Q++ + +CQ I+D Q + LS+ + D S +E SD + ++EN+L
Sbjct: 1027 EHQERYKEECQRIFDLQNKVLSSTEVLSTDTDSSSAEDSDFEEMGKNIENML 1078
Score = 40.8 bits (94), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 9/58 (15%)
Query: 521 FSKHSLQNRDMMEGSWLDNIIWEPVDAVGKPKLI------LDLQDEQMLFEILDNKDD 572
+S + N D++ G W DNIIW DA P+L+ LD DE ++ EI D K++
Sbjct: 435 YSIFPIDNEDLVYGRWEDNIIW---DAQAMPRLLEPPVLTLDPNDENLILEIPDEKEE 489
>gi|81871989|sp|Q60544.1|TAF1_MESAU RecName: Full=Transcription initiation factor TFIID subunit 1;
AltName: Full=Cell cycle gene 1 protein; AltName:
Full=TBP-associated factor 250 kDa; Short=p250; AltName:
Full=Transcription initiation factor TFIID 250 kDa
subunit; Short=TAF(II)250; Short=TAFII-250;
Short=TAFII250
gi|474971|dbj|BAA05110.1| CCG1 [Mesocricetus auratus]
Length = 1865
Score = 258 bits (660), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 166/467 (35%), Positives = 241/467 (51%), Gaps = 46/467 (9%)
Query: 659 DLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLT 718
DL+ KDG + L EY EE L+ GM + YY K PG GA C G +
Sbjct: 665 DLTGKDGDLILAEYSEENGPLMMQVGMATKIKNYY-KRKPGKDPGAPDCK----YGETVY 719
Query: 719 LEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRRIDKVA 778
SPFLG + G + E N++RAP++ HK+ TDFL++R+ +G IR + +
Sbjct: 720 CH---TSPFLGSLHPGQLLQAFENNLFRAPIYLHKMPETDFLIIRTRQG-YYIRELVDIF 775
Query: 779 VVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLS 838
VV QQ PL EV P SK T+ + + V +YR F + R I ++++ FP+ S
Sbjct: 776 VVGQQCPLFEVPGPNSKRANTHIRDFLQVFIYRLFWKSKDRPRR--IRMEDIKKAFPSHS 833
Query: 839 EAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRL 898
E+ IRK+LK CA +R G W +K F +P+E ++R + PE C+Y SM A RL
Sbjct: 834 ESSIRKRLKLCADFKRTGMDSNWWVLKSDFRLPTEEEIRAMVSPEQCCAYYSMIAAEQRL 893
Query: 899 KHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENI 958
K G + + A P+E I+ E++ PWN + F+A +
Sbjct: 894 KDAGYGEKSFFA---------PEEENEEDFQMKIDDEVRTAPWNTTRAFIAAM----KGK 940
Query: 959 ERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLRRLSME 1018
LE+TGV DP+G G GFSYV+ K + K TVTGTDADLRRLS++
Sbjct: 941 CLLEVTGVADPTGCGEGFSYVKIPNKPTQQ----KDDKEPQPVKKTVTGTDADLRRLSLK 996
Query: 1019 AAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------VQLQQQ 1063
A+++L KF VPEE I K +RW I ++R +S+EQA SG + Q++
Sbjct: 997 NAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSKFARGSRFSVAEHQER 1056
Query: 1064 TRGKCQEIWDRQVQSLSAAD---DDEIGSDSEHSDLDSFAGDLENLL 1107
+ +CQ I+D Q + LS+ + D S +E SD + ++EN+L
Sbjct: 1057 YKEECQRIFDLQNKVLSSTEVLSTDTDSSSAEDSDFEEMGKNIENML 1103
Score = 40.0 bits (92), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 9/58 (15%)
Query: 521 FSKHSLQNRDMMEGSWLDNIIWEPVDAVGKPKLI------LDLQDEQMLFEILDNKDD 572
+S + N D++ G W DNIIW DA P+++ LD DE ++ EI D K++
Sbjct: 460 YSIFPIDNEDLVYGRWEDNIIW---DAQAMPRILEPPVLTLDPNDENLILEIPDEKEE 514
>gi|410988808|ref|XP_004000669.1| PREDICTED: transcription initiation factor TFIID subunit 1 isoform 3
[Felis catus]
Length = 1894
Score = 258 bits (660), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 166/472 (35%), Positives = 242/472 (51%), Gaps = 46/472 (9%)
Query: 654 FKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCL 713
+ DL+ KDG + L EY EE L+ GM + YY K PG GA C
Sbjct: 686 MRTPQDLTGKDGDLILAEYSEENGPLMMQVGMATKIKNYY-KRKPGKDPGAPDCK----Y 740
Query: 714 GNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRR 773
G + SPFLG + G + E N++RAP++ HK+ TDFL++R+ +G IR
Sbjct: 741 GETVYCH---TSPFLGSLHPGQLLQAFENNLFRAPIYLHKMPETDFLIIRTRQG-YYIRE 796
Query: 774 IDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQ 833
+ + VV QQ PL EV P SK T+ + + V +YR F + R I ++++
Sbjct: 797 LVDIFVVGQQCPLFEVPGPNSKRANTHIRDFLQVFIYRLFWKSKDRPRR--IRMEDIKKA 854
Query: 834 FPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQA 893
FP+ SE+ IRK+LK CA +R G W +K F +P+E ++R + PE C+Y SM A
Sbjct: 855 FPSHSESSIRKRLKLCADFKRTGMDSNWWVLKSDFRLPTEEEIRAMVSPEQCCAYYSMIA 914
Query: 894 GLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQ 953
RLK G + + A P+E I+ E++ PWN + F+A
Sbjct: 915 AEQRLKDAGYGEKSFFA---------PEEENEEDFQMKIDDEVRTAPWNTTRAFIAAM-- 963
Query: 954 DRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLR 1013
+ LE+TGV DP+G G GFSYV+ K + K TVTGTDADLR
Sbjct: 964 --KGKCLLEVTGVADPTGCGEGFSYVKIPNKPTQQ----KDDKEPQPVKKTVTGTDADLR 1017
Query: 1014 RLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------V 1058
RLS++ A+++L KF VPEE I K +RW I ++R +S+EQA SG
Sbjct: 1018 RLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSKFARGSRFSVA 1077
Query: 1059 QLQQQTRGKCQEIWDRQVQSLSAAD---DDEIGSDSEHSDLDSFAGDLENLL 1107
+ Q++ + +CQ I+D Q + LS+ + D S +E SD + ++EN+L
Sbjct: 1078 EHQERYKEECQRIFDLQNKVLSSTEVLSTDTDSSSAEDSDFEEMGKNIENML 1129
>gi|426361536|ref|XP_004047963.1| PREDICTED: transcription initiation factor TFIID subunit 1-like
[Gorilla gorilla gorilla]
Length = 1824
Score = 258 bits (660), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 172/484 (35%), Positives = 248/484 (51%), Gaps = 54/484 (11%)
Query: 659 DLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLT 718
DL+ KDG + L EY EE L+ GM + YY K PG GA C G +
Sbjct: 689 DLTGKDGDLILAEYSEENGPLMMQVGMATKIKNYY-KRKPGKDPGAPDCK----YGETVY 743
Query: 719 LEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRRIDKVA 778
SPFLG + G +LE N++RAPV+ HK+ TDFL++R+ +G IR + +
Sbjct: 744 CH---TSPFLGSLHPGQLLQALENNLFRAPVYLHKMPQTDFLIIRTRQG-YYIRELVDIF 799
Query: 779 VVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLS 838
VV QQ PL EV P S+ + + + V +YR F + R I ++++ FP+ S
Sbjct: 800 VVGQQCPLFEVPGPNSRRANMHIRDFLQVFIYRLFWKSKDRPRR--IRMEDIKKAFPSHS 857
Query: 839 EAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRL 898
E+ IRK+LK CA +R G W +K F +P+E ++R PE C+Y SM A RL
Sbjct: 858 ESSIRKRLKLCADFKRTGMDSNWWVLKSDFRLPTEEEIRAKVSPEQCCAYYSMIAAKQRL 917
Query: 899 KHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENI 958
K G + + A P+E I+ E+ PWN + F+A +
Sbjct: 918 KDAGYGEKSFFA---------PEEENEEDFQMKIDDEVHAAPWNTTRAFIAAM----KGK 964
Query: 959 ERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLRRLSME 1018
LE+TGV DP+G G GFSYV+ P KK A + TVTGTDADLRRLS++
Sbjct: 965 CLLEVTGVADPTGCGEGFSYVKI-PNKPTQQKDDKKPQAVKK---TVTGTDADLRRLSLK 1020
Query: 1019 AAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------VQLQQQ 1063
A+++L KF VPEE I K +RW I ++R +S+EQA SG + Q++
Sbjct: 1021 NAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQAHSGEGPMSKFARGSRFSVAEHQER 1080
Query: 1064 TRGKCQEIWDRQVQSLSAAD---DDEIGSDSEHSDLDSFAGDLENLLD--------AEEF 1112
+ +CQ I+D Q + LS+ + D S +E SD + ++EN+L + E+
Sbjct: 1081 YKEECQRIFDLQNKVLSSTEVLSTDTDSSSAEDSDFEEMGKNIENMLQTKKTSSQLSREW 1140
Query: 1113 EEEE 1116
EE+E
Sbjct: 1141 EEQE 1144
>gi|358419930|ref|XP_003584364.1| PREDICTED: transcription initiation factor TFIID subunit 1-like [Bos
taurus]
Length = 1526
Score = 258 bits (660), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 170/483 (35%), Positives = 246/483 (50%), Gaps = 52/483 (10%)
Query: 643 GENKSLRPPGAFKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQA 702
GE +R P DL+ KDG + L EY EE L+ GM + YY K PG
Sbjct: 315 GEMFFMRTP------QDLTGKDGDLILAEYSEENGPLMMQVGMATKIKNYY-KRKPGKDP 367
Query: 703 GALLCSGNNCLGNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLV 762
GA C G + SPFLG + G + E N++RAP++ HK+ TDFL++
Sbjct: 368 GAPDCK----YGETVYCH---TSPFLGSLHPGQLLQAFENNLFRAPIYLHKMPETDFLII 420
Query: 763 RSAKGKISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLL 822
R+ +G IR + + VV QQ PL EV P SK T+ + + V +YR F + R
Sbjct: 421 RTRQG-YYIRELVDIFVVGQQCPLFEVPGPNSKRANTHIRDFLQVFIYRLFWKSKDRPRR 479
Query: 823 PCIGVDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYP 882
I ++++ FP+ SE+ IRK+LK CA +R G W +K F +P+E ++R + P
Sbjct: 480 --IRMEDIKKAFPSHSESSIRKRLKLCADFKRTGMDSNWWVLKSDFRLPTEEEIRAMVSP 537
Query: 883 EHVCSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWN 942
E C+Y SM A RLK G + + A P+E I+ E++ PWN
Sbjct: 538 EQCCAYYSMIAAEQRLKDAGYGEKSFFA---------PEEENEEDFQMKIDDEVRTAPWN 588
Query: 943 LSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGG 1002
+ F+A + LE+TGV DP+G G GFSYV+ K + K
Sbjct: 589 TTRAFIAAM----KGKCLLEVTGVADPTGCGEGFSYVKIPNKPTQQ----KDDKEPQPVK 640
Query: 1003 STVTGTDADLRRLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG----- 1057
TVTGTDADLRRLS++ A+++L KF VPEE I K +RW I ++R +S+EQA SG
Sbjct: 641 KTVTGTDADLRRLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMS 700
Query: 1058 ----------VQLQQQTRGKCQEIWDRQVQSLSAAD---DDEIGSDSEHSDLDSFAGDLE 1104
+ Q++ + +CQ I+D Q + LS+ + D S +E SD + ++E
Sbjct: 701 KFARGSRFSVAEHQERYKEECQRIFDLQNKVLSSTEILSTDTDSSSAEDSDFEEMGKNIE 760
Query: 1105 NLL 1107
N+L
Sbjct: 761 NML 763
>gi|403305193|ref|XP_003943154.1| PREDICTED: transcription initiation factor TFIID subunit 1 [Saimiri
boliviensis boliviensis]
Length = 1872
Score = 258 bits (660), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 166/472 (35%), Positives = 242/472 (51%), Gaps = 46/472 (9%)
Query: 654 FKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCL 713
+ DL+ KDG + L EY EE L+ GM + YY K PG GA C
Sbjct: 663 MRTPQDLTGKDGDLILAEYSEENGPLMMQVGMATKIKNYY-KRKPGKDPGAPDCK----Y 717
Query: 714 GNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRR 773
G + SPFLG + G + E N++RAP++ HK+ TDFL++R+ +G IR
Sbjct: 718 GETVYCH---TSPFLGSLHPGQLLQAFENNLFRAPIYLHKMPETDFLIIRTRQG-YYIRE 773
Query: 774 IDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQ 833
+ + VV QQ PL EV P SK T+ + + V +YR F + R I ++++
Sbjct: 774 LVDIFVVGQQCPLFEVPGPNSKRANTHIRDFLQVFIYRLFWKSKDRPRR--IRMEDIKKA 831
Query: 834 FPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQA 893
FP+ SE+ IRK+LK CA +R G W +K F +P+E ++R + PE C+Y SM A
Sbjct: 832 FPSHSESSIRKRLKLCADFKRTGMDSNWWVLKSDFRLPTEEEIRAMVSPEQCCAYYSMIA 891
Query: 894 GLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQ 953
RLK G + + A P+E I+ E++ PWN + F+A
Sbjct: 892 AEQRLKDAGYGEKSFFA---------PEEENEEDFQMKIDDEVRTAPWNTTRAFIAAM-- 940
Query: 954 DRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLR 1013
+ LE+TGV DP+G G GFSYV+ K + K TVTGTDADLR
Sbjct: 941 --KGKCLLEVTGVADPTGCGEGFSYVKIPNKPTQQ----KDDKEPQPVKKTVTGTDADLR 994
Query: 1014 RLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------V 1058
RLS++ A+++L KF VPEE I K +RW I ++R +S+EQA SG
Sbjct: 995 RLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSKFARGSRFSVA 1054
Query: 1059 QLQQQTRGKCQEIWDRQVQSLSAAD---DDEIGSDSEHSDLDSFAGDLENLL 1107
+ Q++ + +CQ I+D Q + LS+ + D S +E SD + ++EN+L
Sbjct: 1055 EHQERYKEECQRIFDLQNKVLSSTEVLSTDTDSSSAEDSDFEEMGKNIENML 1106
Score = 40.8 bits (94), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 9/58 (15%)
Query: 521 FSKHSLQNRDMMEGSWLDNIIWEPVDAVGKPKLI------LDLQDEQMLFEILDNKDD 572
+S + N D++ G W DNIIW DA P+L+ LD DE ++ EI D K++
Sbjct: 463 YSIFPIDNEDLVYGRWEDNIIW---DAQAMPRLLEPPVLTLDPNDENLILEIPDEKEE 517
>gi|426258141|ref|XP_004022677.1| PREDICTED: transcription initiation factor TFIID subunit 1 [Ovis
aries]
Length = 1948
Score = 258 bits (660), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 166/472 (35%), Positives = 242/472 (51%), Gaps = 46/472 (9%)
Query: 654 FKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCL 713
+ DL+ KDG + L EY EE L+ GM + YY K PG GA C
Sbjct: 740 MRTPQDLTGKDGDLILAEYSEENGPLMMQVGMATKIKNYY-KRKPGKDPGAPDCK----Y 794
Query: 714 GNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRR 773
G + SPFLG + G + E N++RAP++ HK+ TDFL++R+ +G IR
Sbjct: 795 GETVYCH---TSPFLGSLHPGQLLQAFENNLFRAPIYLHKMPETDFLIIRTRQG-YYIRE 850
Query: 774 IDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQ 833
+ + VV QQ PL EV P SK T+ + + V +YR F + R I ++++
Sbjct: 851 LVDIFVVGQQCPLFEVPGPNSKRANTHIRDFLQVFIYRLFWKSKDRPRR--IRMEDIKKA 908
Query: 834 FPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQA 893
FP+ SE+ IRK+LK CA +R G W +K F +P+E ++R + PE C+Y SM A
Sbjct: 909 FPSHSESSIRKRLKLCADFKRTGMDSNWWVLKSDFRLPTEEEIRAMVSPEQCCAYYSMIA 968
Query: 894 GLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQ 953
RLK G + + A P+E I+ E++ PWN + F+A
Sbjct: 969 AEQRLKDAGYGEKSFFA---------PEEENEEDFQMKIDDEVRTAPWNTTRAFIAAM-- 1017
Query: 954 DRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLR 1013
+ LE+TGV DP+G G GFSYV+ K + K TVTGTDADLR
Sbjct: 1018 --KGKCLLEVTGVADPTGCGEGFSYVKIPNKPTQQ----KDDKEPQPVKKTVTGTDADLR 1071
Query: 1014 RLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------V 1058
RLS++ A+++L KF VPEE I K +RW I ++R +S+EQA SG
Sbjct: 1072 RLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSKFARGSRFSVA 1131
Query: 1059 QLQQQTRGKCQEIWDRQVQSLSAAD---DDEIGSDSEHSDLDSFAGDLENLL 1107
+ Q++ + +CQ I+D Q + LS+ + D S +E SD + ++EN+L
Sbjct: 1132 EHQERYKEECQRIFDLQNKVLSSTEILSTDTDSSSAEDSDFEEMGKNIENML 1183
>gi|291407673|ref|XP_002720132.1| PREDICTED: TBP-associated factor 1-like [Oryctolagus cuniculus]
Length = 1899
Score = 258 bits (659), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 170/483 (35%), Positives = 246/483 (50%), Gaps = 52/483 (10%)
Query: 643 GENKSLRPPGAFKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQA 702
GE +R P DL+ KDG + L EY EE L+ GM + YY K PG
Sbjct: 687 GEMFFMRTP------QDLTGKDGDLILAEYSEENGPLMMQVGMATKIKNYY-KRKPGKDP 739
Query: 703 GALLCSGNNCLGNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLV 762
GA C G + SPFLG + G + E N++RAP++ HK+ TDFL++
Sbjct: 740 GAPDCK----YGETVYCH---TSPFLGSLHPGQLLQAFENNLFRAPIYLHKMPETDFLII 792
Query: 763 RSAKGKISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLL 822
R+ +G IR + + VV QQ PL EV P SK T+ + + V +YR F + R
Sbjct: 793 RTRQG-YYIRELVDIFVVGQQCPLFEVPGPNSKRANTHIRDFLQVFIYRLFWKSKDRPRR 851
Query: 823 PCIGVDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYP 882
I ++++ FP+ SE+ IRK+LK CA +R G W +K F +P+E ++R + P
Sbjct: 852 --IRMEDIKKAFPSHSESSIRKRLKLCADFKRTGMDSNWWVLKSDFRLPTEEEIRAMVSP 909
Query: 883 EHVCSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWN 942
E C+Y SM A RLK G + + A P+E I+ E++ PWN
Sbjct: 910 EQCCAYYSMIAAEQRLKDAGYGEKSFFA---------PEEENEEDFQMKIDDEVRTAPWN 960
Query: 943 LSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGG 1002
+ F+A + LE+TGV DP+G G GFSYV+ K + K
Sbjct: 961 TTRAFIAAM----KGKCLLEVTGVADPTGCGEGFSYVKIPNKPTQQ----KDDKEPQPVK 1012
Query: 1003 STVTGTDADLRRLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG----- 1057
TVTGTDADLRRLS++ A+++L KF VPEE I K +RW I ++R +S+EQA SG
Sbjct: 1013 KTVTGTDADLRRLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMS 1072
Query: 1058 ----------VQLQQQTRGKCQEIWDRQVQSLSAAD---DDEIGSDSEHSDLDSFAGDLE 1104
+ Q++ + +CQ I+D Q + LS+ + D S +E SD + ++E
Sbjct: 1073 KFARGSRFSVAEHQERYKEECQRIFDLQNKVLSSTEVLSTDTDSSSAEDSDFEEMGKNIE 1132
Query: 1105 NLL 1107
N+L
Sbjct: 1133 NML 1135
Score = 40.8 bits (94), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 9/58 (15%)
Query: 521 FSKHSLQNRDMMEGSWLDNIIWEPVDAVGKPKLI------LDLQDEQMLFEILDNKDD 572
+S + N D++ G W DNIIW DA P+L+ LD DE ++ EI D K++
Sbjct: 492 YSIFPIDNEDLVYGRWEDNIIW---DAQAMPRLLEPPVLTLDPNDENLILEIPDEKEE 546
>gi|24020896|gb|AAN40846.1| TBP-associated factor RNA polymerase 1-like [Macaca fascicularis]
Length = 923
Score = 258 bits (659), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 171/484 (35%), Positives = 249/484 (51%), Gaps = 54/484 (11%)
Query: 659 DLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLT 718
DL+ KDG + L EY EE L+ GM + YY K PG GA C G +
Sbjct: 193 DLTGKDGDLILAEYSEENGPLMMQVGMATKIKNYY-KRKPGKDPGAPDCK----YGETVY 247
Query: 719 LEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRRIDKVA 778
SPFLG + G + E N++RAP++ HK+ TDFL++R+ +G IR + +
Sbjct: 248 CH---TSPFLGSLHPGQLLQAFENNLFRAPIYLHKMPETDFLIIRTRQG-YYIRELVDIF 303
Query: 779 VVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLS 838
VV QQ PL EV P SK T+ + + V +YR F + R I ++++ FP+ S
Sbjct: 304 VVGQQCPLFEVPGPNSKRANTHIRDFLQVFIYRLFWKSKDRPRR--IRMEDIKKAFPSHS 361
Query: 839 EAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRL 898
E+ IRK+LK CA +R G W +K F +P+E ++R + PE C+Y SM A RL
Sbjct: 362 ESSIRKRLKLCADFKRTGMDSNWWVLKSDFRLPTEEEIRAMVSPEQCCAYYSMIAAEQRL 421
Query: 899 KHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENI 958
K G + + A P+E I+ E+ PWN + F+A +
Sbjct: 422 KDAGYGEKSFFA---------PEEENEEDFQMKIDDEVHTAPWNTTRAFIAAM----KGK 468
Query: 959 ERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLRRLSME 1018
LE+TGV DP+G G GFSYV+ P K+ A + TVTGTDADLRRLS++
Sbjct: 469 CLLEVTGVADPTGCGEGFSYVKI-PNKPTQQKDDKEPQAVKK---TVTGTDADLRRLSLK 524
Query: 1019 AAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------VQLQQQ 1063
A+++L KF VPEE I K +RW I ++R +S+EQA SG + Q++
Sbjct: 525 NAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSKFARGSRFSVAEHQER 584
Query: 1064 TRGKCQEIWDRQVQSLSAAD---DDEIGSDSEHSDLDSFAGDLENLLD--------AEEF 1112
+ +CQ I+D Q + LS+ + D S +E SD + ++EN+L + E+
Sbjct: 585 YKEECQRIFDLQNKVLSSTEVLSSDTDSSSAEDSDFEEMGKNIENMLQNKKTSSQLSREW 644
Query: 1113 EEEE 1116
EE+E
Sbjct: 645 EEQE 648
>gi|395546239|ref|XP_003774997.1| PREDICTED: LOW QUALITY PROTEIN: transcription initiation factor TFIID
subunit 1 [Sarcophilus harrisii]
Length = 1859
Score = 258 bits (659), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 165/472 (34%), Positives = 242/472 (51%), Gaps = 46/472 (9%)
Query: 654 FKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCL 713
+ DL+ KDG + L EY EE L+ GM + YY K PG GA C
Sbjct: 642 MRTPQDLTGKDGDLILAEYSEENGPLMMQVGMATKIKNYY-KRKPGKDPGAPDCK----Y 696
Query: 714 GNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRR 773
G + SPFLG + G + E N++RAP++ HK+ TDFL++R+ +G IR
Sbjct: 697 GETVYCH---TSPFLGSLHPGQLLQAFENNLFRAPIYLHKMPETDFLIIRTRQG-YYIRE 752
Query: 774 IDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQ 833
+ + VV QQ PL EV P SK T+ + + V +YR F + R I ++++
Sbjct: 753 LVDIFVVGQQCPLFEVPGPNSKRANTHIRDFLQVFIYRLFWKSRDRPRR--IRMEDIKKA 810
Query: 834 FPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQA 893
FP+ SE+ IRK+LK CA +R G W +K F +P+E ++R + PE C+Y SM A
Sbjct: 811 FPSHSESSIRKRLKLCADFKRTGMDSNWWVLKTDFRLPTEEEIRAMVSPEQCCAYYSMIA 870
Query: 894 GLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQ 953
RLK G + + A P+E I+ E++ PWN + F+A
Sbjct: 871 AEQRLKDAGYGEKSFFA---------PEEENEEDFQMKIDDEVRTAPWNTTRAFIAAM-- 919
Query: 954 DRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLR 1013
+ LE+TGV DP+G G GFSYV+ K + K TVTGTDADLR
Sbjct: 920 --KGKCLLEVTGVADPTGCGEGFSYVKIPNKPTQQ----KDDKEPQPVKKTVTGTDADLR 973
Query: 1014 RLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------V 1058
RLS++ A+++L KF VPEE I K +RW I ++R +S+EQA SG
Sbjct: 974 RLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSKFARGSRFSVA 1033
Query: 1059 QLQQQTRGKCQEIWDRQVQSLSAAD---DDEIGSDSEHSDLDSFAGDLENLL 1107
+ Q++ + +CQ I+D Q + L++ + D S +E SD + ++EN+L
Sbjct: 1034 EHQERYKEECQRIFDLQNKVLASTEILSTDTDSSSAEDSDFEEMGKNIENML 1085
>gi|119625696|gb|EAX05291.1| TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated
factor, 250kDa, isoform CRA_a [Homo sapiens]
Length = 1866
Score = 258 bits (659), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 166/472 (35%), Positives = 242/472 (51%), Gaps = 46/472 (9%)
Query: 654 FKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCL 713
+ DL+ KDG + L EY EE L+ GM + YY K PG GA C
Sbjct: 686 MRTPQDLTGKDGDLILAEYSEENGPLMMQVGMATKIKNYY-KRKPGKDPGAPDCK----Y 740
Query: 714 GNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRR 773
G + SPFLG + G + E N++RAP++ HK+ TDFL++R+ +G IR
Sbjct: 741 GETVYCH---TSPFLGSLHPGQLLQAFENNLFRAPIYLHKMPETDFLIIRTRQG-YYIRE 796
Query: 774 IDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQ 833
+ + VV QQ PL EV P SK T+ + + V +YR F + R I ++++
Sbjct: 797 LVDIFVVGQQCPLFEVPGPNSKRANTHIRDFLQVFIYRLFWKSKDRPRR--IRMEDIKKA 854
Query: 834 FPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQA 893
FP+ SE+ IRK+LK CA +R G W +K F +P+E ++R + PE C+Y SM A
Sbjct: 855 FPSHSESSIRKRLKLCADFKRTGMDSNWWVLKSDFRLPTEEEIRAMVSPEQCCAYYSMIA 914
Query: 894 GLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQ 953
RLK G + + A P+E I+ E++ PWN + F+A
Sbjct: 915 AEQRLKDAGYGEKSFFA---------PEEENEEDFQMKIDDEVRTAPWNTTRAFIAAM-- 963
Query: 954 DRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLR 1013
+ LE+TGV DP+G G GFSYV+ K + K TVTGTDADLR
Sbjct: 964 --KGKCLLEVTGVADPTGCGEGFSYVKIPNKPTQQ----KDDKEPQPVKKTVTGTDADLR 1017
Query: 1014 RLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------V 1058
RLS++ A+++L KF VPEE I K +RW I ++R +S+EQA SG
Sbjct: 1018 RLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSKFARGSRFSVA 1077
Query: 1059 QLQQQTRGKCQEIWDRQVQSLSAAD---DDEIGSDSEHSDLDSFAGDLENLL 1107
+ Q++ + +CQ I+D Q + LS+ + D S +E SD + ++EN+L
Sbjct: 1078 EHQERYKEECQRIFDLQNKVLSSTEVLSTDTDSSSAEDSDFEEMGKNIENML 1129
Score = 40.8 bits (94), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 9/58 (15%)
Query: 521 FSKHSLQNRDMMEGSWLDNIIWEPVDAVGKPKLI------LDLQDEQMLFEILDNKDD 572
+S + N D++ G W DNIIW DA P+L+ LD DE ++ EI D K++
Sbjct: 486 YSIFPIDNEDLVYGRWEDNIIW---DAQAMPRLLEPPVLTLDPNDENLILEIPDEKEE 540
>gi|124486596|ref|NP_001074477.1| transcription initiation factor TFIID subunit 1 [Mus musculus]
gi|162319606|gb|AAI56426.1| TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated
factor [synthetic construct]
Length = 1902
Score = 258 bits (658), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 165/467 (35%), Positives = 241/467 (51%), Gaps = 46/467 (9%)
Query: 659 DLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLT 718
DL+ KDG + L EY EE L+ GM + YY K PG GA C G +
Sbjct: 697 DLTGKDGDLILAEYSEENGPLMMQVGMATKIKNYY-KRKPGKDPGAPDCK----YGETVY 751
Query: 719 LEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRRIDKVA 778
SPFLG + G + E N++RAP++ HK+ +DFL++R+ +G IR + +
Sbjct: 752 CH---TSPFLGSLHPGQLLQAFENNLFRAPIYLHKMPESDFLIIRTRQGYF-IRELVDIF 807
Query: 779 VVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLS 838
VV QQ PL EV P SK T+ + + V +YR F + R I ++++ FP+ S
Sbjct: 808 VVGQQCPLFEVPGPNSKRANTHIRDFLQVFIYRLFWKSKDRPRR--IRMEDIKKAFPSHS 865
Query: 839 EAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRL 898
E+ IRK+LK CA +R G W +K F +P+E ++R + PE C+Y SM A RL
Sbjct: 866 ESSIRKRLKLCADFKRTGMDSNWWVLKSDFRLPTEEEIRAMVSPEQCCAYYSMIAAEQRL 925
Query: 899 KHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENI 958
K G + + A P+E I+ E++ PWN + F+A +
Sbjct: 926 KDAGYGEKSFFA---------PEEENEEDFQMKIDDEVRTAPWNTTRAFIAAM----KGK 972
Query: 959 ERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLRRLSME 1018
LE+TGV DP+G G GFSYV+ K + K TVTGTDADLRRLS++
Sbjct: 973 CLLEVTGVADPTGCGEGFSYVKIPNKPTQQ----KDDKEPQPVKKTVTGTDADLRRLSLK 1028
Query: 1019 AAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------VQLQQQ 1063
A+++L KF VPEE I K +RW I ++R +S+EQA SG + Q++
Sbjct: 1029 NAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSKFARGSRFSVAEHQER 1088
Query: 1064 TRGKCQEIWDRQVQSLSAAD---DDEIGSDSEHSDLDSFAGDLENLL 1107
+ +CQ I+D Q + LS+ + D S +E SD + ++EN+L
Sbjct: 1089 YKEECQRIFDLQNKVLSSTEVLSTDTDSSSAEDSDFEEMGKNIENML 1135
Score = 42.7 bits (99), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 91/239 (38%), Gaps = 51/239 (21%)
Query: 340 FGVEQDAATISEHDEQRK---DSCICSEPMKEESNVNPSVGWKSMPSPNFFPLDQHDWEE 396
GV +D + + +K +S I MK+ + + G + NF + Q WE+
Sbjct: 353 LGVPEDGSGFDYGFKMKKTEHESTIKCNIMKKLRKLEENSGVDLLADENFLMVTQLHWED 412
Query: 397 NIVWDNSPAASDNSIESHEIAGADVESALMRGIELDTGQNNFHERSTSPNEKDCIVNMQN 456
+I+WD G DV+ + T P
Sbjct: 413 DIIWD----------------GEDVK-----------------HKGTKPQRAS------- 432
Query: 457 SPVLSETFGSKSSSDNTSHLFTESRYHPQLLRLESQLDLDNHSHANGIKENVSIKLCQSD 516
L+ S + + ++ + R P + + SQ + H+ + + + S+ D
Sbjct: 433 ---LAGWLPSSMTRNAMAYNVQQGR--PCIKKPTSQTKQNTHTQNSISQPSGSLHTTLDD 487
Query: 517 AVKRFSKHSLQNRDMMEGSWLDNIIWEPVDA---VGKPKLILDLQDEQMLFEILDNKDD 572
+S + N D++ G W DNIIW+ + + P L LD DE ++ EI D K++
Sbjct: 488 DKPWYSIFPIDNEDLVYGRWEDNIIWDAQNMPRILEPPVLTLDPNDENLILEIPDEKEE 546
>gi|119625700|gb|EAX05295.1| TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated
factor, 250kDa, isoform CRA_e [Homo sapiens]
Length = 1863
Score = 258 bits (658), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 166/472 (35%), Positives = 242/472 (51%), Gaps = 46/472 (9%)
Query: 654 FKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCL 713
+ DL+ KDG + L EY EE L+ GM + YY K PG GA C
Sbjct: 686 MRTPQDLTGKDGDLILAEYSEENGPLMMQVGMATKIKNYY-KRKPGKDPGAPDCK----Y 740
Query: 714 GNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRR 773
G + SPFLG + G + E N++RAP++ HK+ TDFL++R+ +G IR
Sbjct: 741 GETVYCH---TSPFLGSLHPGQLLQAFENNLFRAPIYLHKMPETDFLIIRTRQG-YYIRE 796
Query: 774 IDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQ 833
+ + VV QQ PL EV P SK T+ + + V +YR F + R I ++++
Sbjct: 797 LVDIFVVGQQCPLFEVPGPNSKRANTHIRDFLQVFIYRLFWKSKDRPRR--IRMEDIKKA 854
Query: 834 FPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQA 893
FP+ SE+ IRK+LK CA +R G W +K F +P+E ++R + PE C+Y SM A
Sbjct: 855 FPSHSESSIRKRLKLCADFKRTGMDSNWWVLKSDFRLPTEEEIRAMVSPEQCCAYYSMIA 914
Query: 894 GLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQ 953
RLK G + + A P+E I+ E++ PWN + F+A
Sbjct: 915 AEQRLKDAGYGEKSFFA---------PEEENEEDFQMKIDDEVRTAPWNTTRAFIAAM-- 963
Query: 954 DRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLR 1013
+ LE+TGV DP+G G GFSYV+ K + K TVTGTDADLR
Sbjct: 964 --KGKCLLEVTGVADPTGCGEGFSYVKIPNKPTQQ----KDDKEPQPVKKTVTGTDADLR 1017
Query: 1014 RLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------V 1058
RLS++ A+++L KF VPEE I K +RW I ++R +S+EQA SG
Sbjct: 1018 RLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSKFARGSRFSVA 1077
Query: 1059 QLQQQTRGKCQEIWDRQVQSLSAAD---DDEIGSDSEHSDLDSFAGDLENLL 1107
+ Q++ + +CQ I+D Q + LS+ + D S +E SD + ++EN+L
Sbjct: 1078 EHQERYKEECQRIFDLQNKVLSSTEVLSTDTDSSSAEDSDFEEMGKNIENML 1129
Score = 40.8 bits (94), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 9/58 (15%)
Query: 521 FSKHSLQNRDMMEGSWLDNIIWEPVDAVGKPKLI------LDLQDEQMLFEILDNKDD 572
+S + N D++ G W DNIIW DA P+L+ LD DE ++ EI D K++
Sbjct: 486 YSIFPIDNEDLVYGRWEDNIIW---DAQAMPRLLEPPVLTLDPNDENLILEIPDEKEE 540
>gi|297493024|ref|XP_002700087.1| PREDICTED: transcription initiation factor TFIID subunit 1 [Bos
taurus]
gi|358419934|ref|XP_003584365.1| PREDICTED: transcription initiation factor TFIID subunit 1 [Bos
taurus]
gi|296470833|tpg|DAA12948.1| TPA: TBP-associated factor 1-like [Bos taurus]
Length = 2029
Score = 258 bits (658), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 166/472 (35%), Positives = 242/472 (51%), Gaps = 46/472 (9%)
Query: 654 FKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCL 713
+ DL+ KDG + L EY EE L+ GM + YY K PG GA C
Sbjct: 823 MRTPQDLTGKDGDLILAEYSEENGPLMMQVGMATKIKNYY-KRKPGKDPGAPDCK----Y 877
Query: 714 GNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRR 773
G + SPFLG + G + E N++RAP++ HK+ TDFL++R+ +G IR
Sbjct: 878 GETVYCH---TSPFLGSLHPGQLLQAFENNLFRAPIYLHKMPETDFLIIRTRQG-YYIRE 933
Query: 774 IDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQ 833
+ + VV QQ PL EV P SK T+ + + V +YR F + R I ++++
Sbjct: 934 LVDIFVVGQQCPLFEVPGPNSKRANTHIRDFLQVFIYRLFWKSKDRPRR--IRMEDIKKA 991
Query: 834 FPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQA 893
FP+ SE+ IRK+LK CA +R G W +K F +P+E ++R + PE C+Y SM A
Sbjct: 992 FPSHSESSIRKRLKLCADFKRTGMDSNWWVLKSDFRLPTEEEIRAMVSPEQCCAYYSMIA 1051
Query: 894 GLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQ 953
RLK G + + A P+E I+ E++ PWN + F+A
Sbjct: 1052 AEQRLKDAGYGEKSFFA---------PEEENEEDFQMKIDDEVRTAPWNTTRAFIAAM-- 1100
Query: 954 DRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLR 1013
+ LE+TGV DP+G G GFSYV+ K + K TVTGTDADLR
Sbjct: 1101 --KGKCLLEVTGVADPTGCGEGFSYVKIPNKPTQQ----KDDKEPQPVKKTVTGTDADLR 1154
Query: 1014 RLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------V 1058
RLS++ A+++L KF VPEE I K +RW I ++R +S+EQA SG
Sbjct: 1155 RLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSKFARGSRFSVA 1214
Query: 1059 QLQQQTRGKCQEIWDRQVQSLSAAD---DDEIGSDSEHSDLDSFAGDLENLL 1107
+ Q++ + +CQ I+D Q + LS+ + D S +E SD + ++EN+L
Sbjct: 1215 EHQERYKEECQRIFDLQNKVLSSTEILSTDTDSSSAEDSDFEEMGKNIENML 1266
>gi|24020894|gb|AAN40845.1| TBP-associated factor RNA polymerase 1-like [Papio cynocephalus]
Length = 923
Score = 258 bits (658), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 171/484 (35%), Positives = 248/484 (51%), Gaps = 54/484 (11%)
Query: 659 DLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLT 718
DL+ KDG + L EY EE L+ GM + YY K PG GA C G +
Sbjct: 193 DLTGKDGDLILAEYSEENGPLMMQVGMATKIKNYY-KRKPGKDPGAPDCK----YGETVY 247
Query: 719 LEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRRIDKVA 778
SPFLG + G + E N++RAP++ HK+ TDFL++R+ +G IR + +
Sbjct: 248 CH---TSPFLGSLHPGQLLQAFENNLFRAPIYLHKMPETDFLIIRTRQG-YYIRELVDIF 303
Query: 779 VVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLS 838
VV QQ PL EV P SK T+ + + V +YR F + R I ++++ FP+ S
Sbjct: 304 VVGQQCPLFEVPGPNSKRANTHIRDFLQVFIYRLFWKSKDRPRR--IRMEDIKKAFPSHS 361
Query: 839 EAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRL 898
E+ IRK+LK CA +R G W +K F +P+E ++R + PE C+Y SM A RL
Sbjct: 362 ESSIRKRLKLCADFKRTGMDSNWWVLKSDFRLPTEEEIRAMVSPEQCCAYYSMIAAEQRL 421
Query: 899 KHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENI 958
K G + + A P+E I+ E+ PWN + F+A +
Sbjct: 422 KDAGYGEKSFFA---------PEEENEEDFQMKIDDEVHTAPWNTTRAFIAAM----KGK 468
Query: 959 ERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLRRLSME 1018
LE+TGV DP+G G GFSYV+ P K+ A + TVTGTDADLRRLS++
Sbjct: 469 CLLEVTGVADPTGCGEGFSYVKI-PNKPTQQKDDKEPQAVKK---TVTGTDADLRRLSLK 524
Query: 1019 AAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------VQLQQQ 1063
A+++L KF VPEE I K +RW I ++R +S+EQA SG + Q++
Sbjct: 525 NAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSKFARGSRFSVAEHQER 584
Query: 1064 TRGKCQEIWDRQVQSLSAAD---DDEIGSDSEHSDLDSFAGDLENLLD--------AEEF 1112
+ +CQ I+D Q + LS+ + D S +E SD + +EN+L + E+
Sbjct: 585 YKEECQRIFDLQNKVLSSTEVLSSDTDSSSAEDSDFEEMGKSIENMLQNKKTSSQLSREW 644
Query: 1113 EEEE 1116
EE+E
Sbjct: 645 EEQE 648
>gi|297710295|ref|XP_002831832.1| PREDICTED: TAF1 RNA polymerase II, TATA box binding protein
(TBP)-associated factor, 250kDa, partial [Pongo abelii]
Length = 1088
Score = 257 bits (657), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 170/483 (35%), Positives = 246/483 (50%), Gaps = 52/483 (10%)
Query: 643 GENKSLRPPGAFKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQA 702
GE +R P DL+ KDG + L EY EE L+ GM + YY K PG
Sbjct: 543 GEMFFMRTP------QDLTGKDGDLILAEYSEENGPLMMQVGMATKIKNYY-KRKPGKDP 595
Query: 703 GALLCSGNNCLGNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLV 762
GA C G + SPFLG + G + E N++RAP++ HK+ TDFL++
Sbjct: 596 GAPDCK----YGETVYCH---TSPFLGSLHPGQLLQAFENNLFRAPIYLHKMPETDFLII 648
Query: 763 RSAKGKISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLL 822
R+ +G IR + + VV QQ PL EV P SK T+ + + V +YR F + R
Sbjct: 649 RTRQG-YYIRELVDIFVVGQQCPLFEVPGPNSKRANTHIRDFLQVFIYRLFWKSKDRPRR 707
Query: 823 PCIGVDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYP 882
I ++++ FP+ SE+ IRK+LK CA +R G W +K F +P+E ++R + P
Sbjct: 708 --IRMEDIKKAFPSHSESSIRKRLKLCADFKRTGMDSNWWVLKSDFRLPTEEEIRAMVSP 765
Query: 883 EHVCSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWN 942
E C+Y SM A RLK G + + A P+E I+ E++ PWN
Sbjct: 766 EQCCAYYSMIAAEQRLKDAGYGEKSFFA---------PEEENEEDFQMKIDDEVRTAPWN 816
Query: 943 LSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGG 1002
+ F+A + LE+TGV DP+G G GFSYV+ K + K
Sbjct: 817 TTRAFIAAM----KGKCLLEVTGVADPTGCGEGFSYVKIPNKPTQQ----KDDKEPQPVK 868
Query: 1003 STVTGTDADLRRLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG----- 1057
TVTGTDADLRRLS++ A+++L KF VPEE I K +RW I ++R +S+EQA SG
Sbjct: 869 KTVTGTDADLRRLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMS 928
Query: 1058 ----------VQLQQQTRGKCQEIWDRQVQSLSAAD---DDEIGSDSEHSDLDSFAGDLE 1104
+ Q++ + +CQ I+D Q + LS+ + D S +E SD + ++E
Sbjct: 929 KFARGSRFSVAEHQERYKEECQRIFDLQNKVLSSTEVLSTDTDSSSAEDSDFEEMGKNIE 988
Query: 1105 NLL 1107
N+L
Sbjct: 989 NML 991
Score = 40.8 bits (94), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 9/58 (15%)
Query: 521 FSKHSLQNRDMMEGSWLDNIIWEPVDAVGKPKLI------LDLQDEQMLFEILDNKDD 572
+S + N D++ G W DNIIW DA P+L+ LD DE ++ EI D K++
Sbjct: 348 YSIFPIDNEDLVYGRWEDNIIW---DAQAMPRLLEPPVLTLDPNDENLILEIPDEKEE 402
>gi|134039180|sp|Q80UV9.2|TAF1_MOUSE RecName: Full=Transcription initiation factor TFIID subunit 1;
AltName: Full=Cell cycle gene 1 protein; AltName:
Full=TBP-associated factor 250 kDa; Short=p250; AltName:
Full=Transcription initiation factor TFIID 250 kDa
subunit; Short=TAF(II)250; Short=TAFII-250;
Short=TAFII250
Length = 1891
Score = 257 bits (657), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 165/467 (35%), Positives = 241/467 (51%), Gaps = 46/467 (9%)
Query: 659 DLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLT 718
DL+ KDG + L EY EE L+ GM + YY K PG GA C G +
Sbjct: 691 DLTGKDGDLILAEYSEENGPLMMQVGMATKIKNYY-KRKPGKDPGAPDCK----YGETVY 745
Query: 719 LEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRRIDKVA 778
SPFLG + G + E N++RAP++ HK+ +DFL++R+ +G IR + +
Sbjct: 746 CH---TSPFLGSLHPGQLLQAFENNLFRAPIYLHKMPESDFLIIRTRQGYF-IRELVDIF 801
Query: 779 VVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLS 838
VV QQ PL EV P SK T+ + + V +YR F + R I ++++ FP+ S
Sbjct: 802 VVGQQCPLFEVPGPNSKRANTHIRDFLQVFIYRLFWKSKDRPRR--IRMEDIKKAFPSHS 859
Query: 839 EAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRL 898
E+ IRK+LK CA +R G W +K F +P+E ++R + PE C+Y SM A RL
Sbjct: 860 ESSIRKRLKLCADFKRTGMDSNWWVLKSDFRLPTEEEIRAMVSPEQCCAYYSMIAAEQRL 919
Query: 899 KHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENI 958
K G + + A P+E I+ E++ PWN + F+A +
Sbjct: 920 KDAGYGEKSFFA---------PEEENEEDFQMKIDDEVRTAPWNTTRAFIAAM----KGK 966
Query: 959 ERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLRRLSME 1018
LE+TGV DP+G G GFSYV+ K + K TVTGTDADLRRLS++
Sbjct: 967 CLLEVTGVADPTGCGEGFSYVKIPNKPTQQ----KDDKEPQPVKKTVTGTDADLRRLSLK 1022
Query: 1019 AAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------VQLQQQ 1063
A+++L KF VPEE I K +RW I ++R +S+EQA SG + Q++
Sbjct: 1023 NAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSKFARGSRFSVAEHQER 1082
Query: 1064 TRGKCQEIWDRQVQSLSAAD---DDEIGSDSEHSDLDSFAGDLENLL 1107
+ +CQ I+D Q + LS+ + D S +E SD + ++EN+L
Sbjct: 1083 YKEECQRIFDLQNKVLSSTEVLSTDTDSSSAEDSDFEEMGKNIENML 1129
Score = 40.0 bits (92), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Query: 521 FSKHSLQNRDMMEGSWLDNIIWEPVDA---VGKPKLILDLQDEQMLFEILDNKDD 572
+S + N D++ G W DNIIW+ + + P L LD DE ++ EI D K++
Sbjct: 486 YSIFPIDNEDLVYGRWEDNIIWDAQNMPRILEPPVLTLDPNDENLILEIPDEKEE 540
>gi|171451944|dbj|BAG15900.1| TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated
factor, neuron specific isoform [Mus musculus]
Length = 1893
Score = 257 bits (657), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 165/467 (35%), Positives = 241/467 (51%), Gaps = 46/467 (9%)
Query: 659 DLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLT 718
DL+ KDG + L EY EE L+ GM + YY K PG GA C G +
Sbjct: 691 DLTGKDGDLILAEYSEENGPLMMQVGMATKIKNYY-KRKPGKDPGAPDCK----YGETVY 745
Query: 719 LEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRRIDKVA 778
SPFLG + G + E N++RAP++ HK+ +DFL++R+ +G IR + +
Sbjct: 746 CH---TSPFLGSLHPGQLLQAFENNLFRAPIYLHKMPESDFLIIRTRQGYF-IRELVDIF 801
Query: 779 VVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLS 838
VV QQ PL EV P SK T+ + + V +YR F + R I ++++ FP+ S
Sbjct: 802 VVGQQCPLFEVPGPNSKRANTHIRDFLQVFIYRLFWKSKDRPRR--IRMEDIKKAFPSHS 859
Query: 839 EAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRL 898
E+ IRK+LK CA +R G W +K F +P+E ++R + PE C+Y SM A RL
Sbjct: 860 ESSIRKRLKLCADFKRTGMDSNWWVLKSDFRLPTEEEIRAMVSPEQCCAYYSMIAAEQRL 919
Query: 899 KHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENI 958
K G + + A P+E I+ E++ PWN + F+A +
Sbjct: 920 KDAGYGEKSFFA---------PEEENEEDFQMKIDDEVRTAPWNTTRAFIAAM----KGK 966
Query: 959 ERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLRRLSME 1018
LE+TGV DP+G G GFSYV+ K + K TVTGTDADLRRLS++
Sbjct: 967 CLLEVTGVADPTGCGEGFSYVKIPNKPTQQ----KDDKEPQPVKKTVTGTDADLRRLSLK 1022
Query: 1019 AAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------VQLQQQ 1063
A+++L KF VPEE I K +RW I ++R +S+EQA SG + Q++
Sbjct: 1023 NAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSKFARGSRFSVAEHQER 1082
Query: 1064 TRGKCQEIWDRQVQSLSAAD---DDEIGSDSEHSDLDSFAGDLENLL 1107
+ +CQ I+D Q + LS+ + D S +E SD + ++EN+L
Sbjct: 1083 YKEECQRIFDLQNKVLSSTEVLSTDTDSSSAEDSDFEEMGKNIENML 1129
Score = 40.0 bits (92), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Query: 521 FSKHSLQNRDMMEGSWLDNIIWEPVDA---VGKPKLILDLQDEQMLFEILDNKDD 572
+S + N D++ G W DNIIW+ + + P L LD DE ++ EI D K++
Sbjct: 486 YSIFPIDNEDLVYGRWEDNIIWDAQNMPRILEPPVLTLDPNDENLILEIPDEKEE 540
>gi|29733|emb|CAA30073.1| CCG1 protein [Homo sapiens]
gi|742875|prf||2011225A CCG1 gene
Length = 1554
Score = 257 bits (657), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 170/483 (35%), Positives = 246/483 (50%), Gaps = 52/483 (10%)
Query: 643 GENKSLRPPGAFKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQA 702
GE +R P DL+ KDG + L EY EE L+ GM + YY K PG
Sbjct: 604 GEMFFMRTP------QDLTGKDGDLILAEYSEENGPLMMQVGMATKIKNYY-KRKPGKDP 656
Query: 703 GALLCSGNNCLGNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLV 762
GA C G + SPFLG + G + E N++RAP++ HK+ TDFL++
Sbjct: 657 GAPDCK----YGETVYCH---TSPFLGSLHPGQLLQAFENNLFRAPIYLHKMPETDFLII 709
Query: 763 RSAKGKISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLL 822
R+ +G IR + + VV QQ PL EV P SK T+ + + V +YR F + R
Sbjct: 710 RTRQG-YYIRELVDIFVVGQQCPLFEVPGPNSKRANTHIRDFLQVFIYRLFWKSKDRPRR 768
Query: 823 PCIGVDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYP 882
I ++++ FP+ SE+ IRK+LK CA +R G W +K F +P+E ++R + P
Sbjct: 769 --IRMEDIKKAFPSHSESSIRKRLKLCADFKRTGMDSNWWVLKSDFRLPTEEEIRAMVSP 826
Query: 883 EHVCSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWN 942
E C+Y SM A RLK G + + A P+E I+ E++ PWN
Sbjct: 827 EQCCAYYSMIAAEQRLKDAGYGEKSFFA---------PEEENEEDFQMKIDDEVRTAPWN 877
Query: 943 LSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGG 1002
+ F+A + LE+TGV DP+G G GFSYV+ K + K
Sbjct: 878 TTRAFIAAM----KGKCLLEVTGVADPTGCGEGFSYVKIPNKPTQQ----KDDKEPQPVK 929
Query: 1003 STVTGTDADLRRLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG----- 1057
TVTGTDADLRRLS++ A+++L KF VPEE I K +RW I ++R +S+EQA SG
Sbjct: 930 KTVTGTDADLRRLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMS 989
Query: 1058 ----------VQLQQQTRGKCQEIWDRQVQSLSAAD---DDEIGSDSEHSDLDSFAGDLE 1104
+ Q++ + +CQ I+D Q + LS+ + D S +E SD + ++E
Sbjct: 990 KFARGSRFSVAEHQERYKEECQRIFDLQNKVLSSTEVLSTDTDSSSAEDSDFEEMGKNIE 1049
Query: 1105 NLL 1107
N+L
Sbjct: 1050 NML 1052
Score = 40.8 bits (94), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 9/58 (15%)
Query: 521 FSKHSLQNRDMMEGSWLDNIIWEPVDAVGKPKLI------LDLQDEQMLFEILDNKDD 572
+S + N D++ G W DNIIW DA P+L+ LD DE ++ EI D K++
Sbjct: 409 YSIFPIDNEDLVYGRWEDNIIW---DAQAMPRLLEPPVLTLDPNDENLILEIPDEKEE 463
>gi|28958186|gb|AAH47418.1| Taf1 protein, partial [Mus musculus]
Length = 1291
Score = 257 bits (656), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 165/467 (35%), Positives = 241/467 (51%), Gaps = 46/467 (9%)
Query: 659 DLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLT 718
DL+ KDG + L EY EE L+ GM + YY K PG GA C G +
Sbjct: 91 DLTGKDGDLILAEYSEENGPLMMQVGMATKIKNYY-KRKPGKDPGAPDCK----YGETVY 145
Query: 719 LEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRRIDKVA 778
SPFLG + G + E N++RAP++ HK+ +DFL++R+ +G IR + +
Sbjct: 146 CH---TSPFLGSLHPGQLLQAFENNLFRAPIYLHKMPESDFLIIRTRQGYF-IRELVDIF 201
Query: 779 VVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLS 838
VV QQ PL EV P SK T+ + + V +YR F + R I ++++ FP+ S
Sbjct: 202 VVGQQCPLFEVPGPNSKRANTHIRDFLQVFIYRLFWKSKDRPRR--IRMEDIKKAFPSHS 259
Query: 839 EAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRL 898
E+ IRK+LK CA +R G W +K F +P+E ++R + PE C+Y SM A RL
Sbjct: 260 ESSIRKRLKLCADFKRTGMDSNWWVLKSDFRLPTEEEIRAMVSPEQCCAYYSMIAAEQRL 319
Query: 899 KHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENI 958
K G + + A P+E I+ E++ PWN + F+A +
Sbjct: 320 KDAGYGEKSFFA---------PEEENEEDFQMKIDDEVRTAPWNTTRAFIAAM----KGK 366
Query: 959 ERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLRRLSME 1018
LE+TGV DP+G G GFSYV+ K + K TVTGTDADLRRLS++
Sbjct: 367 CLLEVTGVADPTGCGEGFSYVKIPNKPTQQ----KDDKEPQPVKKTVTGTDADLRRLSLK 422
Query: 1019 AAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------VQLQQQ 1063
A+++L KF VPEE I K +RW I ++R +S+EQA SG + Q++
Sbjct: 423 NAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSKFARGSRFSVAEHQER 482
Query: 1064 TRGKCQEIWDRQVQSLSAAD---DDEIGSDSEHSDLDSFAGDLENLL 1107
+ +CQ I+D Q + LS+ + D S +E SD + ++EN+L
Sbjct: 483 YKEECQRIFDLQNKVLSSTEVLSTDTDSSSAEDSDFEEMGKNIENML 529
>gi|300795140|ref|NP_001178652.1| transcription initiation factor TFIID subunit 1 [Rattus norvegicus]
gi|293350971|ref|XP_001061884.2| PREDICTED: transcription initiation factor TFIID subunit 1 isoform 1
[Rattus norvegicus]
Length = 1893
Score = 257 bits (656), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 165/472 (34%), Positives = 242/472 (51%), Gaps = 46/472 (9%)
Query: 654 FKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCL 713
+ DL+ KDG + L EY EE L+ GM + YY K PG GA C
Sbjct: 686 MRTPQDLTGKDGDLILAEYSEENGPLMMQVGMATKIKNYY-KRKPGKDPGAPDCK----Y 740
Query: 714 GNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRR 773
G + SPFLG + G + E N++RAP++ HK+ +DFL++R+ +G IR
Sbjct: 741 GETVYCH---TSPFLGSLHPGQLLQAFENNLFRAPIYLHKMPESDFLIIRTRQG-YYIRE 796
Query: 774 IDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQ 833
+ + VV QQ PL EV P SK T+ + + V +YR F + R I ++++
Sbjct: 797 LVDIFVVGQQCPLFEVPGPNSKRANTHIRDFLQVFIYRLFWKSKDRPRR--IRMEDIKKA 854
Query: 834 FPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQA 893
FP+ SE+ IRK+LK CA +R G W +K F +P+E ++R + PE C+Y SM A
Sbjct: 855 FPSHSESSIRKRLKLCADFKRTGMDSNWWVLKSDFRLPTEEEIRAMVSPEQCCAYYSMIA 914
Query: 894 GLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQ 953
RLK G + + A P+E I+ E++ PWN + F+A
Sbjct: 915 AEQRLKDAGYGEKSFFA---------PEEENEEDFQMKIDDEVRTAPWNTTRAFIAAM-- 963
Query: 954 DRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLR 1013
+ LE+TGV DP+G G GFSYV+ K + K TVTGTDADLR
Sbjct: 964 --KGKCLLEVTGVADPTGCGEGFSYVKIPNKPTQQ----KDDKEPQPVKKTVTGTDADLR 1017
Query: 1014 RLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------V 1058
RLS++ A+++L KF VPEE I K +RW I ++R +S+EQA SG
Sbjct: 1018 RLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSKFARGSRFSVA 1077
Query: 1059 QLQQQTRGKCQEIWDRQVQSLSAAD---DDEIGSDSEHSDLDSFAGDLENLL 1107
+ Q++ + +CQ I+D Q + LS+ + D S +E SD + ++EN+L
Sbjct: 1078 EHQERYKEECQRIFDLQNKVLSSTEVLSTDTDSSSAEDSDFEEMGKNIENML 1129
Score = 40.0 bits (92), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Query: 521 FSKHSLQNRDMMEGSWLDNIIWEPVDA---VGKPKLILDLQDEQMLFEILDNKDD 572
+S + N D++ G W DNIIW+ + + P L LD DE ++ EI D K++
Sbjct: 486 YSIFPIDNEDLVYGRWEDNIIWDAQNMPRILEPPVLTLDPNDENLILEIPDEKEE 540
>gi|47222558|emb|CAG02923.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1949
Score = 257 bits (656), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 163/467 (34%), Positives = 238/467 (50%), Gaps = 46/467 (9%)
Query: 659 DLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLT 718
DL+ KDG + L EY EE P L GM + + YY K PG GA C G +
Sbjct: 713 DLTGKDGDLILAEYSEEYPPLFMQVGMASKIKNYY-KRKPGKDPGAPDCK----YGETVY 767
Query: 719 LEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRRIDKVA 778
SPFLG + G + E N++RAP++ HK+ TDFL++R+ G IR + +
Sbjct: 768 CH---TSPFLGSLHPGQLLQAFENNLFRAPIYLHKMPETDFLVLRTRHGYF-IRELADIF 823
Query: 779 VVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLS 838
VV Q+ PL EV P SK T+ + + V +YR F + R I ++++ FP+ S
Sbjct: 824 VVGQECPLFEVPGPNSKRANTHIRDFLQVFIYRLFWKSKDRPRR--IRMEDIKKAFPSHS 881
Query: 839 EAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRL 898
E+ IRK+LK CA +R G W +K F +P+E ++R + PE C+Y SM RL
Sbjct: 882 ESSIRKRLKLCADFKRTGMDSNWWVLKPDFRLPTEEEIRAMVSPEQCCAYYSMLHAEQRL 941
Query: 899 KHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENI 958
K G + + A P+E I+ E++ PWN + F++ +
Sbjct: 942 KDAGYGEKSFFA---------PEEENEEDFQMKIDDEVRTAPWNTTRAFISAM----KGK 988
Query: 959 ERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLRRLSME 1018
LE+TGV DP+G G GFSYV+ K + K TVTGTDADLRRLS++
Sbjct: 989 CLLEVTGVADPTGCGEGFSYVKVPNKPTQQ----KDDKEPQPAKKTVTGTDADLRRLSLK 1044
Query: 1019 AAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------VQLQQQ 1063
A+++L KF VPEE I K +RW I ++R +S+EQA SG + Q++
Sbjct: 1045 NAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSKFARGSRFSVAEHQER 1104
Query: 1064 TRGKCQEIWDRQ---VQSLSAADDDEIGSDSEHSDLDSFAGDLENLL 1107
+ +CQ I+D Q ++S D S +E SD + ++EN+L
Sbjct: 1105 YKEECQRIFDLQNKVLESTEVLSTDTDSSSAEDSDFEEMGKNIENML 1151
>gi|392343192|ref|XP_003754820.1| PREDICTED: transcription initiation factor TFIID subunit 1 isoform 2
[Rattus norvegicus]
Length = 1870
Score = 256 bits (655), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 165/472 (34%), Positives = 242/472 (51%), Gaps = 46/472 (9%)
Query: 654 FKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCL 713
+ DL+ KDG + L EY EE L+ GM + YY K PG GA C
Sbjct: 665 MRTPQDLTGKDGDLILAEYSEENGPLMMQVGMATKIKNYY-KRKPGKDPGAPDCK----Y 719
Query: 714 GNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRR 773
G + SPFLG + G + E N++RAP++ HK+ +DFL++R+ +G IR
Sbjct: 720 GETVYCH---TSPFLGSLHPGQLLQAFENNLFRAPIYLHKMPESDFLIIRTRQG-YYIRE 775
Query: 774 IDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQ 833
+ + VV QQ PL EV P SK T+ + + V +YR F + R I ++++
Sbjct: 776 LVDIFVVGQQCPLFEVPGPNSKRANTHIRDFLQVFIYRLFWKSKDRPRR--IRMEDIKKA 833
Query: 834 FPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQA 893
FP+ SE+ IRK+LK CA +R G W +K F +P+E ++R + PE C+Y SM A
Sbjct: 834 FPSHSESSIRKRLKLCADFKRTGMDSNWWVLKSDFRLPTEEEIRAMVSPEQCCAYYSMIA 893
Query: 894 GLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQ 953
RLK G + + A P+E I+ E++ PWN + F+A
Sbjct: 894 AEQRLKDAGYGEKSFFA---------PEEENEEDFQMKIDDEVRTAPWNTTRAFIAAM-- 942
Query: 954 DRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLR 1013
+ LE+TGV DP+G G GFSYV+ K + K TVTGTDADLR
Sbjct: 943 --KGKCLLEVTGVADPTGCGEGFSYVKIPNKPTQQ----KDDKEPQPVKKTVTGTDADLR 996
Query: 1014 RLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------V 1058
RLS++ A+++L KF VPEE I K +RW I ++R +S+EQA SG
Sbjct: 997 RLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSKFARGSRFSVA 1056
Query: 1059 QLQQQTRGKCQEIWDRQVQSLSAAD---DDEIGSDSEHSDLDSFAGDLENLL 1107
+ Q++ + +CQ I+D Q + LS+ + D S +E SD + ++EN+L
Sbjct: 1057 EHQERYKEECQRIFDLQNKVLSSTEVLSTDTDSSSAEDSDFEEMGKNIENML 1108
Score = 40.0 bits (92), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Query: 521 FSKHSLQNRDMMEGSWLDNIIWEPVDA---VGKPKLILDLQDEQMLFEILDNKDD 572
+S + N D++ G W DNIIW+ + + P L LD DE ++ EI D K++
Sbjct: 465 YSIFPIDNEDLVYGRWEDNIIWDAQNMPRILEPPVLTLDPNDENLILEIPDEKEE 519
>gi|344281924|ref|XP_003412726.1| PREDICTED: transcription initiation factor TFIID subunit 1 [Loxodonta
africana]
Length = 1859
Score = 256 bits (655), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 169/483 (34%), Positives = 246/483 (50%), Gaps = 52/483 (10%)
Query: 643 GENKSLRPPGAFKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQA 702
GE +R P DL+ KDG + L EY EE L+ GM + YY K PG
Sbjct: 681 GEMFFMRTP------QDLTGKDGDLILAEYSEENGPLMMQVGMATKIKNYY-KRKPGKDP 733
Query: 703 GALLCSGNNCLGNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLV 762
GA C G + SPFLG + G + E N++RAP++ HK+ +DFL++
Sbjct: 734 GAPDCK----YGETVYCH---TSPFLGSLHPGQLLQAFENNLFRAPIYLHKMPESDFLII 786
Query: 763 RSAKGKISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLL 822
R+ +G IR + + VV QQ PL EV P SK T+ + + V +YR F + R
Sbjct: 787 RTRQG-YYIRELVDIFVVGQQCPLFEVPGPNSKRANTHIRDFLQVFIYRLFWKSKDRPRR 845
Query: 823 PCIGVDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYP 882
I ++++ FP+ SE+ IRK+LK CA +R G W +K F +P+E ++R + P
Sbjct: 846 --IRMEDIKKAFPSHSESSIRKRLKLCADFKRTGMDSNWWVLKSDFRLPTEEEIRAMVSP 903
Query: 883 EHVCSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWN 942
E C+Y SM A RLK G + + A P+E I+ E++ PWN
Sbjct: 904 EQCCAYYSMIAAEQRLKDAGYGEKSFFA---------PEEENEEDFQMKIDDEVRTAPWN 954
Query: 943 LSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGG 1002
+ F+A + LE+TGV DP+G G GFSYV+ K + K
Sbjct: 955 TTRAFIAAM----KGKCLLEVTGVADPTGCGEGFSYVKIPNKPTQQ----KDDKEPQPVK 1006
Query: 1003 STVTGTDADLRRLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG----- 1057
TVTGTDADLRRLS++ A+++L KF VPEE I K +RW I ++R +S+EQA SG
Sbjct: 1007 KTVTGTDADLRRLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMS 1066
Query: 1058 ----------VQLQQQTRGKCQEIWDRQVQSLSAAD---DDEIGSDSEHSDLDSFAGDLE 1104
+ Q++ + +CQ I+D Q + LS+ + D S +E SD + ++E
Sbjct: 1067 KFARGSRFSVAEHQERYKEECQRIFDLQNKVLSSTEVLSTDTDSSSAEDSDFEEMGKNIE 1126
Query: 1105 NLL 1107
N+L
Sbjct: 1127 NML 1129
>gi|397520040|ref|XP_003830155.1| PREDICTED: transcription initiation factor TFIID subunit 1-like [Pan
paniscus]
Length = 1825
Score = 256 bits (654), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 178/514 (34%), Positives = 257/514 (50%), Gaps = 60/514 (11%)
Query: 629 RTKIHLLPRAQKLPGENKSLRPPGAFKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGAN 688
+TK+ R GE +R P DL+ KDG + L EY EE L+ GM
Sbjct: 664 KTKMRERERQASGGGELFFMRTP------QDLTGKDGDLILAEYSEENGPLMMQVGMATK 717
Query: 689 LCTYYQKSSPGDQAGALLCSGNNCLGNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAP 748
+ YY K PG GA C G + SPFLG + G +LE N++RAP
Sbjct: 718 IKNYY-KRKPGKDPGAPDCK----YGETVYCH---TSPFLGSLHPGQLLQALENNLFRAP 769
Query: 749 VFTHKVATTDFLLVRSAKGKISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVN 808
V+ HK+ TDFL++R+ +G IR + + VV QQ PL EV P S+ + + + V
Sbjct: 770 VYLHKMPETDFLIIRTRQG-YYIRELVDIFVVGQQCPLFEVPGPNSRRANMHIRDFLQVF 828
Query: 809 VYREFSAAAKRGLLPCIGVDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTF 868
+YR F + R I ++++ FP+ SE+ IRK+LK CA +R G W +K F
Sbjct: 829 IYRLFWKSKDRPRR--IRMEDIKKAFPSHSESSIRKRLKLCADFKRTGMDSNWWVLKSDF 886
Query: 869 HIPSEGDLRKLAYPEHVCSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAA 928
+P+E ++R PE C+Y SM A RLK G + + A P+E
Sbjct: 887 RLPTEEEIRAKVSPEQCCAYYSMIAAKQRLKDAGYGEKSFFA---------PEEENEEDF 937
Query: 929 ASHIERELQITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVS 988
I+ E+ PWN + F+A + LE+TGV DP+G G GFSYV+ P
Sbjct: 938 QLKIDDEVHAAPWNTTRAFIAAM----KGKCLLEVTGVADPTGCGEGFSYVKI-PNKPTQ 992
Query: 989 SAMVKKKAAANRGGSTVTGTDADLRRLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRK 1048
K+ A + TVTGTDADLRRLS++ A+++L KF VPEE I K +RW I ++R
Sbjct: 993 QKDDKEPQAVKK---TVTGTDADLRRLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRT 1049
Query: 1049 LSSEQAASG---------------VQLQQQTRGKCQEIWDRQVQSLSAAD---DDEIGSD 1090
+S+EQA SG + Q+ + +CQ I+D Q + LS+ + D S
Sbjct: 1050 MSTEQAHSGEGPMSKFARGSRFSVAEHQEHYKEECQRIFDLQNKVLSSTEVLSTDTDSSS 1109
Query: 1091 SEHSDLDSFAGDLENLLD--------AEEFEEEE 1116
+E SD + ++EN+L + E+EE+E
Sbjct: 1110 AEDSDFEEMGKNIENMLQNKKTSSQLSHEWEEQE 1143
Score = 40.8 bits (94), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 9/58 (15%)
Query: 521 FSKHSLQNRDMMEGSWLDNIIWEPVDAVGKPKLI------LDLQDEQMLFEILDNKDD 572
+S + N D++ G W DNIIW DA P+L+ LD DE ++ EI D K++
Sbjct: 483 YSIFPIDNEDLVYGRWEDNIIW---DAQAMPRLLEPPVLALDPNDENLILEIPDEKEE 537
>gi|113677837|ref|NP_001038250.1| transcription initiation factor TFIID subunit 1 [Danio rerio]
Length = 1947
Score = 256 bits (654), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 164/467 (35%), Positives = 239/467 (51%), Gaps = 46/467 (9%)
Query: 659 DLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLT 718
DL+ KDG + L EY EE P L GM + + YY K PG GA C G +
Sbjct: 722 DLTGKDGDLVLAEYSEEYPPLHMQVGMASKIKNYY-KRKPGKDPGAPDCK----YGETVY 776
Query: 719 LEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRRIDKVA 778
SPFLG + G + E N++RAP++ HK+ TDFL++R+ +G IR + +
Sbjct: 777 CH---TSPFLGSLHPGQLLQAFENNLFRAPIYLHKMPETDFLIIRTRQGYF-IRELVDIF 832
Query: 779 VVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLS 838
VV Q+ PL EV P SK T+ + + V +YR F + R I ++++ FP+ S
Sbjct: 833 VVGQECPLYEVPGPNSKRANTHIRDFLQVFIYRLFWKSKDRPRR--IRMEDIKKAFPSHS 890
Query: 839 EAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRL 898
E+ IRK+LK CA +R G W +K F +P+E ++R + PE C+Y SM RL
Sbjct: 891 ESSIRKRLKLCADFKRTGMDSNWWVLKPDFRLPTEEEIRAMVSPEQCCAYYSMLVAEQRL 950
Query: 899 KHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENI 958
K G + + A P+E I+ E++ PWN + F+A +
Sbjct: 951 KDAGYGEKSFFA---------PEEENEEEFQMKIDDEVRTAPWNTTRAFIAAM----KGK 997
Query: 959 ERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLRRLSME 1018
LE+TGV DP+G G GFSYV+ K + K TVTGTDADLRRLS++
Sbjct: 998 CLLEVTGVADPTGCGEGFSYVKVPNKPTQQ----KDDREPQPVKKTVTGTDADLRRLSLK 1053
Query: 1019 AAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------VQLQQQ 1063
A+++L KF VPEE I K +RW I ++R +S+EQA SG + Q++
Sbjct: 1054 NAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSKFARGSRFSVAEHQER 1113
Query: 1064 TRGKCQEIWDRQ---VQSLSAADDDEIGSDSEHSDLDSFAGDLENLL 1107
+ +CQ I+D Q ++S D S +E SD + ++EN+L
Sbjct: 1114 YKEECQRIFDLQNKVLESTEVLSTDTDSSSAEDSDFEEMGKNIENML 1160
Score = 40.8 bits (94), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 13/85 (15%)
Query: 491 SQLDLDNHSHANGIKENVSIKLCQSDAVKRFSKHSLQNRDMMEGSWLDNIIW--EPVDAV 548
S+ D NH H ++ D FS + N +++ G W DNIIW + +D +
Sbjct: 497 SKRDKHNHDH----------QVSHEDDTPWFSIFPIDNEELVYGRWEDNIIWDDQNMDCI 546
Query: 549 GKPK-LILDLQDEQMLFEILDNKDD 572
P L L+ DE ++ EI D K++
Sbjct: 547 PSPPVLTLNPNDENIILEIPDEKEE 571
>gi|348538830|ref|XP_003456893.1| PREDICTED: transcription initiation factor TFIID subunit 1-like
[Oreochromis niloticus]
Length = 1947
Score = 256 bits (654), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 164/467 (35%), Positives = 237/467 (50%), Gaps = 46/467 (9%)
Query: 659 DLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLT 718
DL+ KDG + L EY EE L+ GM + YY K PG GA C G +
Sbjct: 719 DLTGKDGDLILAEYSEEYAPLIMQVGMATKIKNYY-KRKPGKDPGAPDCK----YGETVY 773
Query: 719 LEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRRIDKVA 778
SPFLG + G + E N++RAP++ HK+ TDFL++R+ G IR I +
Sbjct: 774 CH---TSPFLGSLHPGQLLQAFENNLFRAPIYLHKMPETDFLVIRTRHG-YYIREIVDIF 829
Query: 779 VVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLS 838
VV Q+ PL EV P SK T+ + + V +YR F + R I ++++ FP+ S
Sbjct: 830 VVGQECPLFEVPGPNSKRANTHIRDFLQVFIYRLFWKSKDRPRR--IRMEDIKKAFPSHS 887
Query: 839 EAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRL 898
E+ IRK+LK CA +R G W +K F +P+E ++R + PE C+Y SM RL
Sbjct: 888 ESSIRKRLKLCADFKRTGMDSNWWVLKPDFRLPTEEEIRAMVSPEQCCAYYSMLVAEQRL 947
Query: 899 KHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENI 958
K G + + A P+E I+ E++ PWN + F++ +
Sbjct: 948 KDAGYGEKSFFA---------PEEENEEDFQMKIDDEVRTAPWNTTRAFISAM----KGK 994
Query: 959 ERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLRRLSME 1018
LE+TGV DP+G G GFSYV+ K + K TVTGTDADLRRLS++
Sbjct: 995 CLLEVTGVADPTGCGEGFSYVKVPNKPTQQ----KDDKEPQPVKKTVTGTDADLRRLSLK 1050
Query: 1019 AAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------VQLQQQ 1063
A+++L KF VPEE I K +RW I ++R +S+EQA SG + Q++
Sbjct: 1051 NAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSKFARGSRFSVAEHQER 1110
Query: 1064 TRGKCQEIWDRQ---VQSLSAADDDEIGSDSEHSDLDSFAGDLENLL 1107
+ +CQ I+D Q ++S D S +E SD D ++EN+L
Sbjct: 1111 YKEECQRIFDLQNKVLESTEVLSTDTDSSSAEDSDFDEMGRNIENML 1157
>gi|242022362|ref|XP_002431609.1| transcription initiation factor TFIID subunit, putative [Pediculus
humanus corporis]
gi|212516917|gb|EEB18871.1| transcription initiation factor TFIID subunit, putative [Pediculus
humanus corporis]
Length = 1892
Score = 256 bits (653), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 164/471 (34%), Positives = 250/471 (53%), Gaps = 53/471 (11%)
Query: 659 DLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLT 718
DLS KDG + L+E+CEE P L++ GM + + YY++ + DQ G +
Sbjct: 671 DLSGKDGDIILIEFCEEHPPLINQVGMCSKIKNYYKRKANKDQGPPEYKYGETAYAHT-- 728
Query: 719 LEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRRIDKVA 778
SPFLG + G S ++E NMYRAP+F HK+ TDFL++R+ + + IR I+ +
Sbjct: 729 ------SPFLGVMAPGASIQTVENNMYRAPLFEHKLQDTDFLVIRTRR-QYWIREINALF 781
Query: 779 VVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREF--SAAAKRGLLPCIGVDELSVQFPN 836
V Q+ PL EV P SK + + + V +YR F S + R I +D++ FP
Sbjct: 782 VAGQECPLYEVPGPNSKRANNFVRDFLQVFIYRLFWKSKDSPRR----IRMDDIKKAFPT 837
Query: 837 LSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLY 896
SE+ IRK+LK CA +R G W +K F +P+E ++R + PE C+Y SM A
Sbjct: 838 HSESSIRKRLKLCADFKRTGTDSNWWVIKPDFRLPTEEEIRAMVSPEQCCAYFSMIAAEQ 897
Query: 897 RLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRE 956
RLK G + + A DE + L ++ E+++ PWN + ++ Q +
Sbjct: 898 RLKDAGYGEKFIFAPQDDD-----DEEMQL----KMDDEVKVAPWNTTRAYI----QANK 944
Query: 957 NIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLRRLS 1016
L++TG DP+G G GFSYVR K + S +++A R VTGTDADLRRLS
Sbjct: 945 GKCLLQLTGPADPTGCGEGFSYVRVPNKPTQSKE--EQEAQPKR---IVTGTDADLRRLS 999
Query: 1017 MEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------VQLQ 1061
+ A+ +L KF VPEE I K +RW I ++R LS+E+A +G + Q
Sbjct: 1000 LNNAKALLRKFGVPEEEIKKLSRWEVIDVVRTLSTEKAKAGEEGMTKFSRGNRFSIAEHQ 1059
Query: 1062 QQTRGKCQEIWDRQVQSLSAA-----DDDEIGSDSEHSDLDSFAGDLENLL 1107
++ + +CQ I++ Q + L ++ D+ E D + SD++ +LEN+L
Sbjct: 1060 ERYKEECQRIFELQNRVLVSSEVLSTDEAESSLDEDSSDIEEMGKNLENML 1110
Score = 43.5 bits (101), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 55/127 (43%), Gaps = 20/127 (15%)
Query: 24 DVSGGNRLLGFMFGNVDYAGDLDVDYLDEDAKEHLAAVADKLGPSLTDIDVWNSQSCFQ- 82
++S L GF+FGN+D +G LD D D +AK++L A+ SL D + + + +
Sbjct: 4 NISSPLSLAGFLFGNIDESGQLDTDLFDNEAKKYLNALTRLGFDSLVDEIIGDEKIIIEN 63
Query: 83 --------------LFCSYCLLSVNSPQPPVDAVEQDYDKKAEDAVDYEDIDEQYEGPEI 128
F + S+ D + KA A+DY DIDE E +
Sbjct: 64 NGNRKSSLSESDSDEFADSQIKSLTG-----DDSSESLCSKAPTAIDYGDIDELAEDCQS 118
Query: 129 QIASEED 135
+ SE D
Sbjct: 119 DVKSESD 125
>gi|449499184|ref|XP_002187692.2| PREDICTED: transcription initiation factor TFIID subunit 1
[Taeniopygia guttata]
Length = 1854
Score = 255 bits (652), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 164/467 (35%), Positives = 240/467 (51%), Gaps = 46/467 (9%)
Query: 659 DLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLT 718
DL+ KDG + L EY EE L+ GM + YY K PG GA C G +
Sbjct: 651 DLTGKDGDLILAEYSEENAPLMMQVGMATKIKNYY-KRKPGKDPGAPDCK----YGETVY 705
Query: 719 LEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRRIDKVA 778
SPFLG + G + E N++RAP++ HK+ TDFL++R+ +G IR + +
Sbjct: 706 CH---TSPFLGSLHPGQLLQAFENNLFRAPIYLHKMPETDFLIIRTRQG-YYIRELVDIF 761
Query: 779 VVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLS 838
VV Q+ PL EV P SK T+ + + V +YR F + R I ++++ FP+ S
Sbjct: 762 VVGQECPLYEVPGPNSKRANTHIRDFLQVFIYRLFWKSRDRPRR--IRMEDIKKAFPSHS 819
Query: 839 EAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRL 898
E+ IRK+LK CA +R G W +K F +P+E ++R + PE C+Y SM A RL
Sbjct: 820 ESSIRKRLKLCADFKRTGMDSNWWVLKPDFRLPTEEEIRAMVSPEQCCAYYSMIAAEQRL 879
Query: 899 KHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENI 958
K G + + A P+E I+ E++ PWN + F+A +
Sbjct: 880 KDAGYGEKSFFA---------PEEENEEDFQMKIDDEVRTAPWNTTRAFIAAM----KGK 926
Query: 959 ERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLRRLSME 1018
LE+TGV DP+G G GFSYV+ K + K TVTGTDADLRRLS++
Sbjct: 927 CLLEVTGVADPTGCGEGFSYVKIPNKPTQQ----KDDKEPQPVKKTVTGTDADLRRLSLK 982
Query: 1019 AAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------VQLQQQ 1063
A+++L KF VPEE I K +RW I ++R +S+EQA SG + Q++
Sbjct: 983 NAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSKFARGSRFSVAEHQER 1042
Query: 1064 TRGKCQEIWDRQVQSLSAAD---DDEIGSDSEHSDLDSFAGDLENLL 1107
+ +CQ I+D Q + L + + D S +E SD + ++EN+L
Sbjct: 1043 YKEECQRIFDLQNKVLESTEILSTDTDSSSAEDSDFEEMGKNIENML 1089
>gi|332831697|ref|XP_003312079.1| PREDICTED: LOW QUALITY PROTEIN: TAF1 RNA polymerase II, TATA box
binding protein (TBP)-associated factor, 210kDa-like [Pan
troglodytes]
Length = 1825
Score = 255 bits (652), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 171/489 (34%), Positives = 247/489 (50%), Gaps = 54/489 (11%)
Query: 654 FKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCL 713
+ DL+ KDG + L EY EE L+ GM + YY K PG GA C
Sbjct: 683 MRTPQDLTGKDGDLILAEYSEENGPLMMQVGMATKIKNYY-KRKPGKDPGAPDCK----Y 737
Query: 714 GNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRR 773
G + SPFLG + G +LE N++RAPV+ HK+ TDFL++R+ +G IR
Sbjct: 738 GETVYCH---TSPFLGSLHPGQLLQALENNLFRAPVYLHKMPETDFLIIRTRQG-YYIRE 793
Query: 774 IDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQ 833
+ + VV QQ PL EV P S+ + + + V +YR F + R I ++++
Sbjct: 794 LVDIFVVGQQCPLFEVPGPNSRRANMHIRDFLQVFIYRLFWKSKDRPRR--IRMEDIKKA 851
Query: 834 FPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQA 893
FP+ SE+ IRK+LK CA R G W +K F +P+E ++R PE C+Y SM A
Sbjct: 852 FPSHSESSIRKRLKLCADFNRTGMDSNWWVLKSDFRLPTEEEIRAKVSPEQCCAYYSMIA 911
Query: 894 GLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQ 953
RLK G + + A P+E I+ E+ PWN + F+A
Sbjct: 912 AKQRLKDAGYGEKSFFA---------PEEENEEDFQMKIDDEVHAAPWNTTRAFIAAM-- 960
Query: 954 DRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLR 1013
+ LE+TGV DP+G G GFSYV+ P K+ A + TVTGTDADLR
Sbjct: 961 --KGKCLLEVTGVADPTGCGEGFSYVKI-PNKPTQQKDDKEPQAVKK---TVTGTDADLR 1014
Query: 1014 RLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------V 1058
RLS++ A+++L KF VPEE I K +RW I ++R +S+EQA SG
Sbjct: 1015 RLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQAHSGEGPMSKFARGSRFSVA 1074
Query: 1059 QLQQQTRGKCQEIWDRQVQSLSAAD---DDEIGSDSEHSDLDSFAGDLENLLD------- 1108
+ Q+ + +CQ I+D Q + LS+ + D S +E SD + ++EN+L
Sbjct: 1075 EHQEHYKEECQRIFDLQNKVLSSTEVLSTDTDSSSAEDSDFEEMGKNIENMLQNKKTSSQ 1134
Query: 1109 -AEEFEEEE 1116
+ E+EE+E
Sbjct: 1135 LSHEWEEQE 1143
Score = 40.8 bits (94), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 9/58 (15%)
Query: 521 FSKHSLQNRDMMEGSWLDNIIWEPVDAVGKPKLI------LDLQDEQMLFEILDNKDD 572
+S + N D++ G W DNIIW DA P+L+ LD DE ++ EI D K++
Sbjct: 483 YSIFPIDNEDLVYGRWEDNIIW---DAQAMPRLLEPPVLALDPNDENLILEIPDEKEE 537
>gi|24429572|ref|NP_722516.1| transcription initiation factor TFIID subunit 1-like [Homo sapiens]
gi|57013082|sp|Q8IZX4.1|TAF1L_HUMAN RecName: Full=Transcription initiation factor TFIID subunit 1-like;
AltName: Full=TAF(II)210; AltName: Full=TBP-associated
factor 1-like; AltName: Full=TBP-associated factor 210
kDa; AltName: Full=Transcription initiation factor TFIID
210 kDa subunit
gi|24020884|gb|AAN40840.1|AF390562_1 TBP-associated factor RNA polymerase 1-like [Homo sapiens]
gi|225000444|gb|AAI72227.1| TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated
factor, 210kDa-like [synthetic construct]
Length = 1826
Score = 255 bits (652), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 171/484 (35%), Positives = 248/484 (51%), Gaps = 54/484 (11%)
Query: 659 DLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLT 718
DL+ KDG + L EY EE L+ GM + YY K PG GA C G +
Sbjct: 689 DLTGKDGDLILAEYSEENGPLMMQVGMATKIKNYY-KRKPGKDPGAPDCK----YGETVY 743
Query: 719 LEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRRIDKVA 778
SPFLG + G +LE N++RAPV+ HK+ TDFL++R+ +G IR + +
Sbjct: 744 CH---TSPFLGSLHPGQLLQALENNLFRAPVYLHKMPETDFLIIRTRQG-YYIRELVDIF 799
Query: 779 VVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLS 838
VV QQ PL EV P S+ + + + V +YR F + R I ++++ FP+ S
Sbjct: 800 VVGQQCPLFEVPGPNSRRANMHIRDFLQVFIYRLFWKSKDRPRR--IRMEDIKKAFPSHS 857
Query: 839 EAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRL 898
E+ IRK+LK CA +R G W +K F +P+E ++R PE C+Y SM A RL
Sbjct: 858 ESSIRKRLKLCADFKRTGMDSNWWVLKSDFRLPTEEEIRAKVSPEQCCAYYSMIAAKQRL 917
Query: 899 KHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENI 958
K G + + A P+E I+ E+ PWN + F+A +
Sbjct: 918 KDAGYGEKSFFA---------PEEENEEDFQMKIDDEVHAAPWNTTRAFIAAM----KGK 964
Query: 959 ERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLRRLSME 1018
LE+TGV DP+G G GFSYV+ P K+ A + TVTGTDADLRRLS++
Sbjct: 965 CLLEVTGVADPTGCGEGFSYVKI-PNKPTQQKDDKEPQAVKK---TVTGTDADLRRLSLK 1020
Query: 1019 AAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------VQLQQQ 1063
A+++L KF VPEE I K +RW I ++R +S+EQA SG + Q++
Sbjct: 1021 NAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQAHSGEGPMSKFARGSRFSVAEHQER 1080
Query: 1064 TRGKCQEIWDRQVQSLSAADDDEIGSDS---EHSDLDSFAGDLENLLD--------AEEF 1112
+ +CQ I+D Q + LS+ + +DS E SD + ++EN+L + E+
Sbjct: 1081 YKEECQRIFDLQNKVLSSTEVLSTDTDSISAEDSDFEEMGKNIENMLQNKKTSSQLSREW 1140
Query: 1113 EEEE 1116
EE+E
Sbjct: 1141 EEQE 1144
Score = 40.8 bits (94), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 9/58 (15%)
Query: 521 FSKHSLQNRDMMEGSWLDNIIWEPVDAVGKPKLI------LDLQDEQMLFEILDNKDD 572
+S + N D++ G W DNIIW DA P+L+ LD DE ++ EI D K++
Sbjct: 484 YSIFPIDNEDLVYGRWEDNIIW---DAQAMPRLLEPPVLALDPNDENLILEIPDEKEE 538
>gi|449267897|gb|EMC78788.1| Transcription initiation factor TFIID subunit 1, partial [Columba
livia]
Length = 1855
Score = 255 bits (651), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 163/467 (34%), Positives = 240/467 (51%), Gaps = 46/467 (9%)
Query: 659 DLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLT 718
DL+ KDG + L EY EE L+ GM + YY K PG GA C G +
Sbjct: 638 DLTGKDGDLILAEYSEENAPLMMQVGMATKIKNYY-KRKPGKDPGAPDCK----YGETVY 692
Query: 719 LEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRRIDKVA 778
SPFLG + G + E N++RAP++ HK+ TDFL++R+ +G +R + +
Sbjct: 693 CH---TSPFLGSLHPGQLLQAFENNLFRAPIYLHKMPETDFLIIRTRQG-YYVRELVDIF 748
Query: 779 VVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLS 838
VV Q+ PL EV P SK T+ + + V +YR F + R I ++++ FP+ S
Sbjct: 749 VVGQECPLYEVPGPNSKRANTHIRDFLQVFIYRLFWKSRDRPRR--IRMEDIKKAFPSHS 806
Query: 839 EAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRL 898
E+ IRK+LK CA +R G W +K F +P+E ++R + PE C+Y SM A RL
Sbjct: 807 ESSIRKRLKLCADFKRTGMDSNWWVLKPDFRLPTEEEIRAMVSPEQCCAYYSMIAAEQRL 866
Query: 899 KHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENI 958
K G + + A P+E I+ E++ PWN + F+A +
Sbjct: 867 KDAGYGEKSFFA---------PEEENEEDFQMKIDDEVRTAPWNTTRAFIAAM----KGK 913
Query: 959 ERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLRRLSME 1018
LE+TGV DP+G G GFSYV+ K + K TVTGTDADLRRLS++
Sbjct: 914 CLLEVTGVADPTGCGEGFSYVKIPNKPTQQ----KDDKEPQPVKKTVTGTDADLRRLSLK 969
Query: 1019 AAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------VQLQQQ 1063
A+++L KF VPEE I K +RW I ++R +S+EQA SG + Q++
Sbjct: 970 NAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSKFARGSRFSVAEHQER 1029
Query: 1064 TRGKCQEIWDRQVQSLSAAD---DDEIGSDSEHSDLDSFAGDLENLL 1107
+ +CQ I+D Q + L + + D S +E SD + ++EN+L
Sbjct: 1030 YKEECQRIFDLQNKVLESTEILSTDTDSSSAEDSDFEEMGKNIENML 1076
>gi|384251526|gb|EIE25003.1| hypothetical protein COCSUDRAFT_46554 [Coccomyxa subellipsoidea
C-169]
Length = 1957
Score = 255 bits (651), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 194/588 (32%), Positives = 283/588 (48%), Gaps = 107/588 (18%)
Query: 596 AESVKLFYLGKELED----HKSLADQNVRPNSLIHLIRT--KIHLLPRAQKLPGENKSL- 648
AE +F+L +L SL V N I L + ++ LP A ++P + +
Sbjct: 862 AELRPVFWLRAQLPRILPADVSLRQAGVPANVSIDLAVSFPQLRPLPLANQVPDPSSGVP 921
Query: 649 -RPPGAFKKKSDLSVKDGHVFLMEYCEERPLLLSNAG----------------------- 684
RPPGAF DL+ KDGH+ L+EY EE+PLLLS G
Sbjct: 922 TRPPGAFTTSKDLTAKDGHIVLLEYLEEKPLLLSRPGKQTQHINHVETNRYAQDTADMGC 981
Query: 685 MGANLCTYYQKSSPGDQAGAL-LCSGNNC--LGNVLTLEPGDKSPFL-GDIKAGCSQSSL 740
MG L TYY+K + D L +G G+V + P D SPFL GDI G ++ +L
Sbjct: 982 MGVRLTTYYRKRNATDNVDLQKLANGKEAWKTGHVEVMSPDDDSPFLLGDIAPGSARLAL 1041
Query: 741 ETNMYRAPVFTHKVATTDFLLVRSAKGKISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTY 800
+TNM+RA H +DFLLVR+ G +S+R + + QQEP + V P SK +
Sbjct: 1042 DTNMFRAAASPHAPRHSDFLLVRAPSGALSLRHLSGTLLAGQQEPNLIVPWPRSKEARDI 1101
Query: 801 SINRMLVNVYREF---------SAAAKRGL-LPCIGVDELSVQFPN--LSEAIIRKKLKE 848
NR++ +V R + G I +EL F ++++++ +L+E
Sbjct: 1102 EENRLMAHVCRLLFKRQQKIDKGRGGRAGFGQAAISWEELRADFTPAMMTDSVLANRLRE 1161
Query: 849 -CAFLRR---DGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRLKHLGIT 904
C R DG+G W ++ IP E +LRK+ PE C+YESM+ G+ RLK G+
Sbjct: 1162 RCDCQPRGGEDGSG-DAWVLRPGGRIPGETELRKVMTPEAWCAYESMRRGIMRLKDAGL- 1219
Query: 905 QLTLPASISSAMSQLPDEAIAL-------------AAASHIERE---------LQITPWN 942
+I + ++Q+P + + L A A H ERE +Q TPW
Sbjct: 1220 ------AIHAPLAQVPPDRLRLMFEALPPSPEREAAFAMHQERESAFAALELAVQATPWG 1273
Query: 943 LSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGG 1002
L+ NF A RE RL +TG GDP+GRG GFSY+R KA+ + V K+
Sbjct: 1274 LTENFNAAM---REGRGRLALTGPGDPTGRGSGFSYLRDDRKAAAEAGPVPKREVGQ--- 1327
Query: 1003 STVTGTDADLRRLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSS----------- 1051
+TGT++DLRRLSM +RE+LL + ++ I +RW RI ++R LS
Sbjct: 1328 --ITGTNSDLRRLSMAKSREILLSLGMTDDEIKGLSRWQRIGLVRDLSGAAIMDGDSALG 1385
Query: 1052 -----EQAASGVQLQQQTRGKCQEIWDRQVQSLSAADD--DEIGSDSE 1092
Q S ++L QQ+ K Q I+ Q + L+ + D+ GS+ E
Sbjct: 1386 QRYARAQRQSALELLQQSVSKAQAIFAAQAELLAGGKESADDSGSEDE 1433
Score = 53.5 bits (127), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 58/121 (47%), Gaps = 19/121 (15%)
Query: 15 DEDDEEEYEDVSGGNRLLGFMFGNVDYAGDLDVDYLDEDAKEHLAAVAD-KLGPSL---- 69
+ D E + ED G L+GF+FGNVD L+ DY+DEDA+E L A+ D KLG +
Sbjct: 2 ESDSEGDGEDR--GGSLVGFLFGNVDRDMQLEDDYMDEDAREALFALGDEKLGGDVLTLQ 59
Query: 70 ------TDIDVWNSQSCFQLFCSYCLLSVNSPQPPVDAVEQDYDKKAEDAVDYEDIDEQY 123
+ +D+ +SC LF + + Y K EDA +Y D +E
Sbjct: 60 AQHLEASSVDLLKLRSCLPLFQGDAGKGGEA------STRDSYGGKDEDAKNYSDEEEMA 113
Query: 124 E 124
E
Sbjct: 114 E 114
>gi|432898490|ref|XP_004076527.1| PREDICTED: transcription initiation factor TFIID subunit 1-like
[Oryzias latipes]
Length = 1933
Score = 255 bits (651), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 162/467 (34%), Positives = 238/467 (50%), Gaps = 46/467 (9%)
Query: 659 DLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLT 718
DL+ KDG + L EY EE P L+ GM + YY K PG GA C G +
Sbjct: 708 DLTGKDGDLILAEYSEEYPPLIMQVGMATKIKNYY-KRKPGKDPGAPDCK----YGETVY 762
Query: 719 LEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRRIDKVA 778
SPFLG + G + E N++R+P++ HK+ TDFL++R+ G IR + +
Sbjct: 763 CH---TSPFLGSLHPGQLLQAFENNLFRSPIYLHKMPETDFLVLRTRHGYF-IRELVDII 818
Query: 779 VVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLS 838
VV Q+ PL EV P SK T+ + + V +YR F + R I ++++ FP+ S
Sbjct: 819 VVGQECPLFEVPGPNSKRANTHIRDFLQVFIYRLFWKSKDRPRR--IRMEDIKKAFPSHS 876
Query: 839 EAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRL 898
E+ IRK+LK CA +R G W +K F +P+E ++R + PE C+Y SM RL
Sbjct: 877 ESSIRKRLKLCADFKRTGMDSNWWVLKPDFRLPTEEEIRAMVSPEQCCAYYSMLVAEQRL 936
Query: 899 KHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENI 958
K G + + A P+E I+ E++ PWN + F++ +
Sbjct: 937 KDAGYGEKSFFA---------PEEENEEDFQMKIDDEVRTAPWNTTRAFISAM----KGK 983
Query: 959 ERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLRRLSME 1018
LE+TGV DP+G G GFSYV+ K + K TVTGTDADLRRLS++
Sbjct: 984 CLLEVTGVADPTGCGEGFSYVKVPNKPTQQ----KDDKEPQPVKKTVTGTDADLRRLSLK 1039
Query: 1019 AAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------VQLQQQ 1063
A+++L KF VPEE I K +RW I ++R +S+EQA SG + Q++
Sbjct: 1040 NAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSKFARGSRFSVAEHQER 1099
Query: 1064 TRGKCQEIWDRQ---VQSLSAADDDEIGSDSEHSDLDSFAGDLENLL 1107
+ +CQ I+D Q ++S D S +E SD + ++EN+L
Sbjct: 1100 YKEECQRIFDLQNKVLESTEVLSTDTDSSSAEDSDFEEMGKNIENML 1146
Score = 40.0 bits (92), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 505 KENVSIKLCQSDAVKRFSKHSLQNRDMMEGSWLDNIIWEPVD---AVGKPKLILDLQDEQ 561
K ++ + Q ++ +S + N +++ G W DNIIW+ + + P L LD DE
Sbjct: 487 KSSLDHQASQEESCSWYSIFPIDNEELVYGRWEDNIIWDDQEMDHMLAPPVLTLDPNDEN 546
Query: 562 MLFEILDNKDD 572
++ EI D K++
Sbjct: 547 IILEIPDEKEE 557
>gi|24020888|gb|AAN40842.1| TBP-associated factor RNA polymerase 1-like [Gorilla gorilla]
Length = 854
Score = 255 bits (651), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 172/484 (35%), Positives = 248/484 (51%), Gaps = 54/484 (11%)
Query: 659 DLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLT 718
DL+ KDG + L EY EE L+ GM + YY K PG GA C G +
Sbjct: 131 DLTGKDGDLILAEYSEENGPLMMQVGMATKIKNYY-KRKPGKDPGAPDCK----YGETVY 185
Query: 719 LEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRRIDKVA 778
SPFLG + G +LE N++RAPV+ HK+ TDFL++R+ +G IR + +
Sbjct: 186 CH---TSPFLGSLHPGQLLQALENNLFRAPVYLHKMPQTDFLIIRTRQG-YYIRELVDIF 241
Query: 779 VVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLS 838
VV QQ PL EV P S+ + + + V +YR F + R I ++++ FP+ S
Sbjct: 242 VVGQQCPLFEVPGPNSRRANMHIRDFLQVFIYRLFWKSKDRPRR--IRMEDIKKAFPSHS 299
Query: 839 EAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRL 898
E+ IRK+LK CA +R G W +K F +P+E ++R PE C+Y SM A RL
Sbjct: 300 ESSIRKRLKLCADFKRTGMDSNWWVLKSDFRLPTEEEIRAKVSPEQCCAYYSMIAAKQRL 359
Query: 899 KHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENI 958
K G + + A P+E I+ E+ PWN + F+A +
Sbjct: 360 KDAGYGEKSFFA---------PEEENEEDFQMKIDDEVHAAPWNTTRAFIAAM----KGK 406
Query: 959 ERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLRRLSME 1018
LE+TGV DP+G G GFSYV+ P KK A + TVTGTDADLRRLS++
Sbjct: 407 CLLEVTGVADPTGCGEGFSYVKI-PNKPTQQKDDKKPQAVKK---TVTGTDADLRRLSLK 462
Query: 1019 AAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------VQLQQQ 1063
A+++L KF VPEE I K +RW I ++R +S+EQA SG + Q++
Sbjct: 463 NAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQAHSGEGPMSKFARGSRFSVAEHQER 522
Query: 1064 TRGKCQEIWDRQVQSLSAAD---DDEIGSDSEHSDLDSFAGDLENLLD--------AEEF 1112
+ +CQ I+D Q + LS+ + D S +E SD + ++EN+L + E+
Sbjct: 523 YKEECQRIFDLQNKVLSSTEVLSTDTDSSSAEDSDFEEMGKNIENMLQTKKTSSQLSREW 582
Query: 1113 EEEE 1116
EE+E
Sbjct: 583 EEQE 586
>gi|363732975|ref|XP_420198.3| PREDICTED: LOW QUALITY PROTEIN: transcription initiation factor TFIID
subunit 1, partial [Gallus gallus]
Length = 1885
Score = 254 bits (650), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 163/467 (34%), Positives = 240/467 (51%), Gaps = 46/467 (9%)
Query: 659 DLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLT 718
DL+ KDG + L EY EE L+ GM + YY K PG GA C G +
Sbjct: 689 DLTGKDGDLILAEYSEENAPLMMQVGMATKIKNYY-KRKPGKDPGAPDCK----YGETVY 743
Query: 719 LEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRRIDKVA 778
SPFLG + G + E N++RAP++ HK+ TDFL++R+ +G +R + +
Sbjct: 744 CH---TSPFLGSLHPGQLLQAFENNLFRAPIYLHKMPETDFLIIRTRQG-YYVRELVDIF 799
Query: 779 VVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLS 838
VV Q+ PL EV P SK T+ + + V +YR F + R I ++++ FP+ S
Sbjct: 800 VVGQECPLYEVPGPNSKRANTHIRDFLQVFIYRLFWKSRDRPRR--IRMEDIKKAFPSHS 857
Query: 839 EAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRL 898
E+ IRK+LK CA +R G W +K F +P+E ++R + PE C+Y SM A RL
Sbjct: 858 ESSIRKRLKLCADFKRTGMDSNWWVLKPDFRLPTEEEIRAMVSPEQCCAYYSMIAAEQRL 917
Query: 899 KHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENI 958
K G + + A P+E I+ E++ PWN + F+A +
Sbjct: 918 KDAGYGEKSFFA---------PEEENEEDFQMKIDDEVRTAPWNTTRAFIAAM----KGK 964
Query: 959 ERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLRRLSME 1018
LE+TGV DP+G G GFSYV+ K + K TVTGTDADLRRLS++
Sbjct: 965 CLLEVTGVADPTGCGEGFSYVKIPNKPTQQ----KDDKEPQPVKKTVTGTDADLRRLSLK 1020
Query: 1019 AAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------VQLQQQ 1063
A+++L KF VPEE I K +RW I ++R +S+EQA SG + Q++
Sbjct: 1021 NAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSKFARGSRFSVAEHQER 1080
Query: 1064 TRGKCQEIWDRQVQSLSAAD---DDEIGSDSEHSDLDSFAGDLENLL 1107
+ +CQ I+D Q + L + + D S +E SD + ++EN+L
Sbjct: 1081 YKEECQRIFDLQNKVLESTEILSTDTDSSSAEDSDFEEMGKNIENML 1127
>gi|157112132|ref|XP_001657406.1| transcription initiation factor TFIID subunit 1 [Aedes aegypti]
gi|108878153|gb|EAT42378.1| AAEL006082-PA [Aedes aegypti]
Length = 1962
Score = 253 bits (647), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 158/468 (33%), Positives = 243/468 (51%), Gaps = 47/468 (10%)
Query: 659 DLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLT 718
DLS +DG + L+E+CEE P L++ GM + YY++ + D G
Sbjct: 701 DLSGRDGELILVEFCEEHPPLMNQVGMATKIKNYYKRKAAKDAGPPEFKYGE-------- 752
Query: 719 LEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRRIDKVA 778
L SPFLG + G +E NMYRAP++ H V TDFL++R+ + +R +D +
Sbjct: 753 LHFAHTSPFLGILHPGHCMQVVENNMYRAPIYQHHVMETDFLVIRT-RSNYYVREVDALF 811
Query: 779 VVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLS 838
Q+ PL EV P SK + + + V +YR F + I +D++ FP S
Sbjct: 812 TAGQECPLYEVPGPNSKRANNFVRDFLQVFIYRLFWKSKDNPR--KIRMDDIKKAFPAHS 869
Query: 839 EAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRL 898
E+ IRK+LK+CA +R G W +K F +PSE ++R + PE C+Y SM A RL
Sbjct: 870 ESSIRKRLKQCADFKRTGMDSNFWVIKPEFRLPSEEEIRAMVSPEQCCAYFSMIAAEQRL 929
Query: 899 KHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENI 958
K G + + A + DE + L ++ E+++ PWN + ++ Q
Sbjct: 930 KDAGYGEKFI-----FAQQEDDDEEMQL----KMDDEVKVAPWNTTRAYI----QAMRGK 976
Query: 959 ERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLRRLSME 1018
L++ G DP+G G GFSYVR K + + K+ ++ TVTGTDADLRRLS+
Sbjct: 977 CILQLNGPADPTGCGEGFSYVRMPNKPTQQN----KEEIESQPKRTVTGTDADLRRLSLN 1032
Query: 1019 AAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------VQLQQQ 1063
A+ +L KF VPEE I K +RW I ++R LS+E+A +G + Q++
Sbjct: 1033 NAKALLRKFQVPEEEIKKLSRWEVIDVVRTLSTEKAKAGEEGMDKFSRGNRFSIAEHQER 1092
Query: 1064 TRGKCQEIWDRQVQSLSAAD----DDEIGSDSEHSDLDSFAGDLENLL 1107
+ +CQ I+D Q + L++++ D+ + SE SDL+ +LEN+L
Sbjct: 1093 YKEECQRIFDLQNRVLASSEVLSTDEGESTASEESDLEELGKNLENML 1140
Score = 47.0 bits (110), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 61/117 (52%), Gaps = 8/117 (6%)
Query: 15 DEDDEEEYE---DVSGGNRLLGFMFGNVDYAGDLDVDYLDEDAKEHLAAVADKLGPS--L 69
D D++ E++ D G L GF+FGNVD G L+ D+LDE+AK+HL++++ ++G S L
Sbjct: 4 DSDNDNEHDQDNDNEGELNLAGFLFGNVDEHGRLENDFLDEEAKQHLSSLS-RMGLSSFL 62
Query: 70 TDI--DVWNSQSCFQLFCSYCLLSVNSPQPPVDAVEQDYDKKAEDAVDYEDIDEQYE 124
D+ D S + D +Y KA+DAVD+ D +E E
Sbjct: 63 ADVLTDGTEKAPVEHSDSDDSSSSDDHRYDDNDDDNANYKIKADDAVDFSDFNELAE 119
>gi|148682192|gb|EDL14139.1| mCG2203 [Mus musculus]
Length = 1882
Score = 253 bits (646), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 167/468 (35%), Positives = 242/468 (51%), Gaps = 50/468 (10%)
Query: 659 DLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLT 718
DL+ KDG + L EY EE L+ GM + YY K PG GA C G +
Sbjct: 690 DLTGKDGDLILAEYSEENGPLMMQVGMATKIKNYY-KRKPGKDPGAPDCK----YGETVY 744
Query: 719 LEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRRIDKVA 778
SPFLG + G + E N++RAP++ HK+ +DFL++R+ +G IR + +
Sbjct: 745 CH---TSPFLGSLHPGQLLQAFENNLFRAPIYLHKMPESDFLIIRTRQGYF-IRELVDIF 800
Query: 779 VVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLS 838
VV QQ PL EV P SK T+ + + V +YR F + R I ++++ FP+ S
Sbjct: 801 VVGQQCPLFEVPGPNSKRANTHIRDFLQVFIYRLFWKSKDRPRR--IRMEDIKKAFPSHS 858
Query: 839 EAIIRKKLKECA-FLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYR 897
E+ IRK+LK CA F R D N W +K F +P+E ++R + PE C+Y SM A R
Sbjct: 859 ESSIRKRLKLCADFKRMDSNW---WVLKSDFRLPTEEEIRAMVSPEQCCAYYSMIAAEQR 915
Query: 898 LKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDREN 957
LK G + + A P+E I+ E++ PWN + F+A +
Sbjct: 916 LKDAGYGEKSFFA---------PEEENEEDFQMKIDDEVRTAPWNTTRAFIAAM----KG 962
Query: 958 IERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLRRLSM 1017
LE+TGV DP+G G GFSYV+ K + K TVTGTDADLRRLS+
Sbjct: 963 KCLLEVTGVADPTGCGEGFSYVKIPNKPTQQ----KDDKEPQPVKKTVTGTDADLRRLSL 1018
Query: 1018 EAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------VQLQQ 1062
+ A+++L KF VPEE I K +RW I ++R +S+EQA SG + Q+
Sbjct: 1019 KNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSKFARGSRFSVAEHQE 1078
Query: 1063 QTRGKCQEIWDRQVQSLSAAD---DDEIGSDSEHSDLDSFAGDLENLL 1107
+ + +CQ I+D Q + LS+ + D S +E SD + ++EN+L
Sbjct: 1079 RYKEECQRIFDLQNKVLSSTEVLSTDTDSSSAEDSDFEEMGKNIENML 1126
Score = 40.0 bits (92), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Query: 521 FSKHSLQNRDMMEGSWLDNIIWEPVDA---VGKPKLILDLQDEQMLFEILDNKDD 572
+S + N D++ G W DNIIW+ + + P L LD DE ++ EI D K++
Sbjct: 485 YSIFPIDNEDLVYGRWEDNIIWDAQNMPRILEPPVLTLDPNDENLILEIPDEKEE 539
>gi|170035156|ref|XP_001845437.1| transcription initiation factor TFIID subunit 1 [Culex
quinquefasciatus]
gi|167876989|gb|EDS40372.1| transcription initiation factor TFIID subunit 1 [Culex
quinquefasciatus]
Length = 2050
Score = 253 bits (646), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 160/468 (34%), Positives = 243/468 (51%), Gaps = 47/468 (10%)
Query: 659 DLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLT 718
DLS +DG L+E+CEE P L++ GM + YY++ + D G +
Sbjct: 687 DLSGRDGECVLVEFCEEHPPLMNQVGMATKIKNYYKRKAAKDAGPVEFRYGETHYAHT-- 744
Query: 719 LEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRRIDKVA 778
SPFLG + G +E NMYRAP++ H V TDFL++R+ + IR ID +
Sbjct: 745 ------SPFLGILHPGHCIQVVENNMYRAPIYPHNVNETDFLVIRT-RNSYFIREIDALF 797
Query: 779 VVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLS 838
Q+ PL EV P SK + + + V +YR F + R I +D++ FP S
Sbjct: 798 TAGQECPLYEVPGPNSKRANNFVRDFLQVFIYRLFWKS--RDNPRKIRMDDIKKAFPAHS 855
Query: 839 EAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRL 898
E+ IRK+LK+CA +R G W +K F +PSE ++R + PE C+Y SM A RL
Sbjct: 856 ESSIRKRLKQCADFKRTGMDSNFWVIKPEFRLPSEEEIRAMVSPEQCCAYFSMIAAEQRL 915
Query: 899 KHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENI 958
K G + + A + DE + L ++ E+++ PWN + ++ Q
Sbjct: 916 KDAGYGEKFI-----FAQQEDDDEEMQL----KMDDEVKVAPWNTTRAYI----QAMRGK 962
Query: 959 ERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLRRLSME 1018
L++ G DP+G G GFSYVR K + + K+ ++ TVTGTDADLRRLS+
Sbjct: 963 CILQLNGPADPTGCGEGFSYVRMPNKPTQQN----KEEIESQPKRTVTGTDADLRRLSLN 1018
Query: 1019 AAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------VQLQQQ 1063
A+ +L KF VPEE I K +RW I ++R LS+E+A +G + Q++
Sbjct: 1019 NAKALLRKFQVPEEEIKKLSRWEVIDVVRTLSTEKAKAGEEGMDKFSRGNRFSIAEHQER 1078
Query: 1064 TRGKCQEIWDRQVQSLSAAD----DDEIGSDSEHSDLDSFAGDLENLL 1107
+ +CQ I+D Q + L++++ D+ + SE SDL+ +LEN+L
Sbjct: 1079 YKEECQRIFDLQNRVLASSEVLSTDEGESTASEESDLEELGKNLENML 1126
Score = 55.1 bits (131), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 67/137 (48%), Gaps = 15/137 (10%)
Query: 12 DGRDEDDEEEYEDVSGGN-RLLGFMFGNVDYAGDLDVDYLDEDAKEHLAAVADKLGPS-- 68
D +E+D ++ D GG L GF+FGNVD G L+ D+LDE+AK HL++++ ++G S
Sbjct: 3 DSENENDPDQDGDHEGGELNLAGFLFGNVDEHGRLENDFLDEEAKMHLSSLS-RMGLSSF 61
Query: 69 ----LTDIDVWNSQSCFQLFCSYCLLSVNSPQPPVDAVEQDYDKKAEDAVDYEDIDEQYE 124
LTD Q S P D +Y KAEDAVDY D +E E
Sbjct: 62 LADVLTDGTEKPQQQDSDSDDSSSSDDRRYDDP--DEDNANYRVKAEDAVDYSDFNELAE 119
Query: 125 -----GPEIQIASEEDY 136
PE +EDY
Sbjct: 120 ELPDAPPEPASRDDEDY 136
>gi|270003291|gb|EEZ99738.1| hypothetical protein TcasGA2_TC002507 [Tribolium castaneum]
Length = 1887
Score = 253 bits (646), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 157/471 (33%), Positives = 245/471 (52%), Gaps = 53/471 (11%)
Query: 659 DLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLT 718
DL+ +DG + L+E+CEE P L++ GM + + YY++ + D G +
Sbjct: 670 DLTGRDGDIILIEFCEEHPPLMNQVGMCSKIKNYYKRKAAKDSGPPSYKYGETAYAHT-- 727
Query: 719 LEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRRIDKVA 778
SPFLG + G S ++E NMYRAP++ H +DFL++R+ + + IR ID +
Sbjct: 728 ------SPFLGILHPGQSIQAIENNMYRAPIYEHDKPCSDFLVIRT-RQQYYIREIDALY 780
Query: 779 VVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLS 838
V QQ PL EV P SK + + + V +YR F + R I ++++ FP+ S
Sbjct: 781 VAGQQCPLYEVPGPNSKRANNFVRDFLQVFIYRLFWKS--RDNPRRIKMEDIKKAFPSHS 838
Query: 839 EAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRL 898
E+ IRK+LK CA +R G W +K F +P+E ++R + PE C+Y SM A RL
Sbjct: 839 ESSIRKRLKLCADFKRTGMDSNWWVIKPEFRLPTEEEIRAMVSPEQCCAYFSMVAAEQRL 898
Query: 899 KHLGITQ--LTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRE 956
K G + + PA QL ++ E+++ PWN + ++ Q +
Sbjct: 899 KDAGYGEKFIFTPAEDDDEEMQL-----------KMDDEVKVAPWNTTRAYI----QAMK 943
Query: 957 NIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLRRLS 1016
L++TG DP+G G GFSYVR K + + K+ ++ TVTGTDADLRRLS
Sbjct: 944 GKCLLQLTGPADPTGCGEGFSYVRVPNKPTQN-----KEEQESQPKRTVTGTDADLRRLS 998
Query: 1017 MEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------VQLQ 1061
+ A+ +L KF VPEE I K +RW I ++R LS+E+A +G + Q
Sbjct: 999 LNNAKALLRKFGVPEEEIKKLSRWEVIDVVRTLSTEKAKAGEEGMDKFSRGNRFSIAEHQ 1058
Query: 1062 QQTRGKCQEIWDRQVQSLSAA-----DDDEIGSDSEHSDLDSFAGDLENLL 1107
++ + +CQ I+D Q + LS+A D+ E + D++ ++EN+L
Sbjct: 1059 ERYKEECQRIFDLQNRVLSSAEVLSTDEGESSDEGSDEDIEEMGKNIENML 1109
>gi|189235868|ref|XP_001811347.1| PREDICTED: similar to transcription initiation factor TFIID subunit 1
[Tribolium castaneum]
Length = 1881
Score = 253 bits (646), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 157/471 (33%), Positives = 245/471 (52%), Gaps = 53/471 (11%)
Query: 659 DLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLT 718
DL+ +DG + L+E+CEE P L++ GM + + YY++ + D G +
Sbjct: 664 DLTGRDGDIILIEFCEEHPPLMNQVGMCSKIKNYYKRKAAKDSGPPSYKYGETAYAHT-- 721
Query: 719 LEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRRIDKVA 778
SPFLG + G S ++E NMYRAP++ H +DFL++R+ + + IR ID +
Sbjct: 722 ------SPFLGILHPGQSIQAIENNMYRAPIYEHDKPCSDFLVIRT-RQQYYIREIDALY 774
Query: 779 VVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLS 838
V QQ PL EV P SK + + + V +YR F + R I ++++ FP+ S
Sbjct: 775 VAGQQCPLYEVPGPNSKRANNFVRDFLQVFIYRLFWKS--RDNPRRIKMEDIKKAFPSHS 832
Query: 839 EAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRL 898
E+ IRK+LK CA +R G W +K F +P+E ++R + PE C+Y SM A RL
Sbjct: 833 ESSIRKRLKLCADFKRTGMDSNWWVIKPEFRLPTEEEIRAMVSPEQCCAYFSMVAAEQRL 892
Query: 899 KHLGITQ--LTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRE 956
K G + + PA QL ++ E+++ PWN + ++ Q +
Sbjct: 893 KDAGYGEKFIFTPAEDDDEEMQL-----------KMDDEVKVAPWNTTRAYI----QAMK 937
Query: 957 NIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLRRLS 1016
L++TG DP+G G GFSYVR K + + K+ ++ TVTGTDADLRRLS
Sbjct: 938 GKCLLQLTGPADPTGCGEGFSYVRVPNKPTQN-----KEEQESQPKRTVTGTDADLRRLS 992
Query: 1017 MEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------VQLQ 1061
+ A+ +L KF VPEE I K +RW I ++R LS+E+A +G + Q
Sbjct: 993 LNNAKALLRKFGVPEEEIKKLSRWEVIDVVRTLSTEKAKAGEEGMDKFSRGNRFSIAEHQ 1052
Query: 1062 QQTRGKCQEIWDRQVQSLSAA-----DDDEIGSDSEHSDLDSFAGDLENLL 1107
++ + +CQ I+D Q + LS+A D+ E + D++ ++EN+L
Sbjct: 1053 ERYKEECQRIFDLQNRVLSSAEVLSTDEGESSDEGSDEDIEEMGKNIENML 1103
>gi|149042183|gb|EDL95890.1| TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated
factor (predicted) [Rattus norvegicus]
Length = 1826
Score = 253 bits (645), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 167/473 (35%), Positives = 243/473 (51%), Gaps = 50/473 (10%)
Query: 654 FKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCL 713
+ DL+ KDG + L EY EE L+ GM + YY K PG GA C
Sbjct: 685 MRTPQDLTGKDGDLILAEYSEENGPLMMQVGMATKIKNYY-KRKPGKDPGAPDCK----Y 739
Query: 714 GNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRR 773
G + SPFLG + G + E N++RAP++ HK+ +DFL++R+ +G IR
Sbjct: 740 GETVYCH---TSPFLGSLHPGQLLQAFENNLFRAPIYLHKMPESDFLIIRTRQG-YYIRE 795
Query: 774 IDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQ 833
+ + VV QQ PL EV P SK T+ + + V +YR F + R I ++++
Sbjct: 796 LVDIFVVGQQCPLFEVPGPNSKRANTHIRDFLQVFIYRLFWKSKDRPRR--IRMEDIKKA 853
Query: 834 FPNLSEAIIRKKLKECA-FLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQ 892
FP+ SE+ IRK+LK CA F R D N W +K F +P+E ++R + PE C+Y SM
Sbjct: 854 FPSHSESSIRKRLKLCADFKRMDSNW---WVLKSDFRLPTEEEIRAMVSPEQCCAYYSMI 910
Query: 893 AGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTN 952
A RLK G + + A P+E I+ E++ PWN + F+A
Sbjct: 911 AAEQRLKDAGYGEKSFFA---------PEEENEEDFQMKIDDEVRTAPWNTTRAFIAAM- 960
Query: 953 QDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADL 1012
+ LE+TGV DP+G G GFSYV+ K + K TVTGTDADL
Sbjct: 961 ---KGKCLLEVTGVADPTGCGEGFSYVKIPNKPTQQ----KDDKEPQPVKKTVTGTDADL 1013
Query: 1013 RRLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG--------------- 1057
RRLS++ A+++L KF VPEE I K +RW I ++R +S+EQA SG
Sbjct: 1014 RRLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSKFARGSRFSV 1073
Query: 1058 VQLQQQTRGKCQEIWDRQVQSLSAAD---DDEIGSDSEHSDLDSFAGDLENLL 1107
+ Q++ + +CQ I+D Q + LS+ + D S +E SD + ++EN+L
Sbjct: 1074 AEHQERYKEECQRIFDLQNKVLSSTEVLSTDTDSSSAEDSDFEEMGKNIENML 1126
Score = 40.0 bits (92), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Query: 521 FSKHSLQNRDMMEGSWLDNIIWEPVDA---VGKPKLILDLQDEQMLFEILDNKDD 572
+S + N D++ G W DNIIW+ + + P L LD DE ++ EI D K++
Sbjct: 485 YSIFPIDNEDLVYGRWEDNIIWDAQNMPRILEPPVLTLDPNDENLILEIPDEKEE 539
>gi|321455339|gb|EFX66475.1| hypothetical protein DAPPUDRAFT_10162 [Daphnia pulex]
Length = 1552
Score = 253 bits (645), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 158/440 (35%), Positives = 233/440 (52%), Gaps = 48/440 (10%)
Query: 659 DLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLT 718
DLS KDG + L+EYCEE P L+S GM + L YY++ + D G +
Sbjct: 611 DLSGKDGDLILLEYCEEHPPLISQVGMSSRLKNYYKRKAVKDTGPPQYKYGETAYAHT-- 668
Query: 719 LEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRRIDKVA 778
SPFLG + G S ++E NMYRAP++ H++ +TDFL++R+ + +R +D
Sbjct: 669 ------SPFLGTLHPGQSIQAIENNMYRAPIYEHQLPSTDFLVIRT-RTTYHVREVDAFY 721
Query: 779 VVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREF--SAAAKRGLLPCIGVDELSVQFPN 836
V Q+ PL EV P SK ++ + + V +YR F S R I +D++ FP
Sbjct: 722 TVGQECPLYEVPGPNSKRANNFTRDFLQVFIYRLFWKSPDTPRR----IRMDDIKRAFPA 777
Query: 837 LSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLY 896
SE+ IRK+LK CA +R G W ++ F +PSE +LR L PE C+Y SM A
Sbjct: 778 HSESSIRKRLKLCADFKRTGVDSNWWVLRPDFRLPSEEELRALVSPEQCCAYFSMIAAEQ 837
Query: 897 RLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRE 956
RLK G + L A Q DE L ++ E+++ PWN + +V Q +
Sbjct: 838 RLKDAGYGEKFL-----FAPEQDDDEDQQL----KMDDEVKVAPWNTTRAYV----QAMK 884
Query: 957 NIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLRRLS 1016
N L++TG DP+G G GFSYVR K +++ K+ ++ VTGTDADLRRLS
Sbjct: 885 NKCLLQLTGPADPTGCGEGFSYVRVPNKPTIN-----KEELESQPKRIVTGTDADLRRLS 939
Query: 1017 MEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------VQLQ 1061
+ A+ +L K VPEE I K +RW I ++R LS+E+A +G + Q
Sbjct: 940 LNNAKAILRKHGVPEEEIKKLSRWEVIDVVRTLSTEKAKAGEEGMDKFSRGNRFSIAEHQ 999
Query: 1062 QQTRGKCQEIWDRQVQSLSA 1081
++ + +CQ I+D Q + L++
Sbjct: 1000 ERYKEECQRIFDLQNRVLAS 1019
>gi|410915594|ref|XP_003971272.1| PREDICTED: transcription initiation factor TFIID subunit 1-like
[Takifugu rubripes]
Length = 1968
Score = 252 bits (643), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 161/467 (34%), Positives = 237/467 (50%), Gaps = 46/467 (9%)
Query: 659 DLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLT 718
DL+ KDG + L EY EE P L GM + + YY K PG GA C G +
Sbjct: 741 DLTGKDGDLILAEYSEEYPPLFMQVGMASKIKNYY-KRKPGKDPGAPDCK----YGETVY 795
Query: 719 LEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRRIDKVA 778
SPFLG + G + E N++RAP++ HK+ +DFL++R+ G IR + +
Sbjct: 796 CH---TSPFLGSLHPGQLLQAFENNLFRAPIYLHKMPESDFLVLRTRHGYF-IRELADIF 851
Query: 779 VVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLS 838
VV Q+ L EV P SK T+ + + V +YR F + R I ++++ FP+ S
Sbjct: 852 VVGQECSLFEVPGPNSKRANTHIRDFLQVFIYRLFWKSKDRPRR--IRMEDIKKAFPSHS 909
Query: 839 EAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRL 898
E+ IRK+LK CA +R G W +K F +P+E ++R + PE C+Y SM RL
Sbjct: 910 ESSIRKRLKLCADFKRTGMDSNWWVLKPDFRLPTEEEIRAMVSPEQCCAYYSMLHAEQRL 969
Query: 899 KHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENI 958
K G + + A P+E I+ E++ PWN + F++ +
Sbjct: 970 KDAGYGEKSFFA---------PEEENEEDFQMKIDDEVRTAPWNTTRAFISAM----KGK 1016
Query: 959 ERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLRRLSME 1018
LE+TGV DP+G G GFSYV+ K + K TVTGTDADLRRLS++
Sbjct: 1017 CLLEVTGVADPTGCGEGFSYVKVPNKPTQQ----KDDKEPQPAKKTVTGTDADLRRLSLK 1072
Query: 1019 AAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------VQLQQQ 1063
A+++L KF VPEE I K +RW I ++R +S+EQA SG + Q++
Sbjct: 1073 NAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSKFARGSRFSVAEHQER 1132
Query: 1064 TRGKCQEIWDRQ---VQSLSAADDDEIGSDSEHSDLDSFAGDLENLL 1107
+ +CQ I+D Q ++S D S +E SD + ++EN+L
Sbjct: 1133 YKEECQRIFDLQNKVLESTEVLSTDTDSSSAEDSDFEEMGKNIENML 1179
Score = 40.4 bits (93), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 521 FSKHSLQNRDMMEGSWLDNIIWEPVD---AVGKPKLILDLQDEQMLFEILDNKDD 572
FS + N +++ G W DNIIW+ + + P L+LD DE ++ EI D K++
Sbjct: 536 FSIFPIDNEELVYGRWEDNIIWDDQEMDHMLMPPILVLDPNDENIILEIPDEKEE 590
>gi|24020886|gb|AAN40841.1| TBP-associated factor RNA polymerase 1-like [Pan troglodytes]
Length = 854
Score = 252 bits (643), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 171/484 (35%), Positives = 246/484 (50%), Gaps = 54/484 (11%)
Query: 659 DLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLT 718
DL+ KDG + L EY EE L+ GM + YY K PG GA C G +
Sbjct: 131 DLTGKDGDLILAEYSEENGPLMMQVGMATKIKNYY-KRKPGKDPGAPDCK----YGETVY 185
Query: 719 LEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRRIDKVA 778
SPFLG + G +LE N++RAPV+ HK+ TDFL++R+ +G IR + +
Sbjct: 186 CH---TSPFLGSLHPGQLLQALENNLFRAPVYLHKMPETDFLIIRTRQG-YYIRELVDIF 241
Query: 779 VVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLS 838
VV QQ PL EV P S+ + + + V +YR F + R I ++++ FP+ S
Sbjct: 242 VVGQQCPLFEVPGPNSRRANMHIRDFLQVFIYRLFWKSKDRPRR--IRMEDIKKAFPSHS 299
Query: 839 EAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRL 898
E+ IRK+LK CA R G W +K F +P+E ++R PE C+Y SM A RL
Sbjct: 300 ESSIRKRLKLCADFNRTGMDSNWWVLKSDFRLPTEEEIRAKVSPEQCCAYYSMIAAKQRL 359
Query: 899 KHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENI 958
K G + + A P+E I+ E+ PWN + F+A +
Sbjct: 360 KDAGYGEKSFFA---------PEEENEEDFQMKIDDEVHAAPWNTTRAFIAAM----KGK 406
Query: 959 ERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLRRLSME 1018
LE+TGV DP+G G GFSYV+ P K+ A + TVTGTDADLRRLS++
Sbjct: 407 CLLEVTGVADPTGCGEGFSYVKI-PNKPTQQKDDKEPQAVKK---TVTGTDADLRRLSLK 462
Query: 1019 AAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------VQLQQQ 1063
A+++L KF VPEE I K +RW I ++R +S+EQA SG + Q+
Sbjct: 463 NAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQAHSGEGPMSKFARGSRFSVAEHQEH 522
Query: 1064 TRGKCQEIWDRQVQSLSAAD---DDEIGSDSEHSDLDSFAGDLENLLD--------AEEF 1112
+ +CQ I+D Q + LS+ + D S +E SD + ++EN+L + E+
Sbjct: 523 YKEECQRIFDLQNKVLSSTEVLSTDTDSSSAEDSDFEEMGKNIENMLQNKKTSSQLSHEW 582
Query: 1113 EEEE 1116
EE+E
Sbjct: 583 EEQE 586
>gi|390336365|ref|XP_003724334.1| PREDICTED: transcription initiation factor TFIID subunit 1-like
isoform 2 [Strongylocentrotus purpuratus]
Length = 1941
Score = 252 bits (643), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 158/474 (33%), Positives = 243/474 (51%), Gaps = 49/474 (10%)
Query: 659 DLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLT 718
DLS DGH+ + EYCEE P + GM + YY++ D L G NV +
Sbjct: 734 DLSGMDGHLIMTEYCEEYPPQMMQVGMATRITNYYKRKPSSDAKPPLHEYGETI--NVHS 791
Query: 719 LEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRRIDKVA 778
SPFLG ++ G S + E N++RAP++ HKV TTDFLL+R+ + K IR ++ +
Sbjct: 792 ------SPFLGSLRPGQSLQAFENNLFRAPLYKHKVPTTDFLLIRT-RHKYHIRALNDIF 844
Query: 779 VVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLS 838
V QQ PL+EV P SK + + + V +YR F + R I ++++ FP S
Sbjct: 845 TVGQQYPLLEVPGPNSKKSNNHIRDFLQVFIYRLFLKSIDRPRR--IKMEDIKKAFPTHS 902
Query: 839 EAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRL 898
E+ IRK+LK CA +R G W MK F +PSE ++R + PE C+Y SMQ RL
Sbjct: 903 ESSIRKRLKLCADFKRTGLDSNWWVMKPDFRLPSEEEIRAMVSPELCCAYYSMQGAEQRL 962
Query: 899 KHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENI 958
K G + + A + + I+ E++ PWN + F+A +
Sbjct: 963 KDAGYGEKSFFAPDNDDD----------DDNAKIDDEVKTAPWNTTRAFIAAM----KGK 1008
Query: 959 ERLEITGVGDPSGRGLGFSYVRAA--PKASVSSAMVKKKAAANRGGSTVTGTDADLRRLS 1016
L +TGV DP+G G GFSY++ P V+K + TVTGTDADLRRL+
Sbjct: 1009 CLLAVTGVADPTGCGEGFSYIKVPNKPMQQKQDEAVEKPTQPKK---TVTGTDADLRRLN 1065
Query: 1017 MEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------VQLQ 1061
++ A+++L F + EE I K +RW I ++R S++QA +G + Q
Sbjct: 1066 LKQAKQLLRNFGIAEEDIKKLSRWEVIDVVRTYSTQQARTGDSTTSKFARGNRFGIAEHQ 1125
Query: 1062 QQTRGKCQEIWDRQVQSLS----AADDDEIGSDSEHSDLDSFAGDLENLLDAEE 1111
++ + +CQ I+D Q + LS + D++ + E SD + ++E +L +++
Sbjct: 1126 ERYKEECQRIFDLQSKVLSNTEVSTDEESSSGEGEDSDFEEMGKNIEVMLSSKK 1179
Score = 42.7 bits (99), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 7/51 (13%)
Query: 12 DGRDEDDEEEYEDVSGGNRLLGFMFGNVDYAGDLDVDYLDEDAKEHLAAVA 62
D DED E+ L GFMFGN++ +G L+ D LDE+AK HL+ +
Sbjct: 2 DSEDEDGAPEFS-------LTGFMFGNINKSGQLENDLLDEEAKCHLSGLG 45
>gi|195107200|ref|XP_001998203.1| GI23838 [Drosophila mojavensis]
gi|193914797|gb|EDW13664.1| GI23838 [Drosophila mojavensis]
Length = 2125
Score = 251 bits (642), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 153/447 (34%), Positives = 236/447 (52%), Gaps = 49/447 (10%)
Query: 654 FKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCL 713
+ DLS KDG + L E+CEE P L++ GM + + YY++ + D G
Sbjct: 729 MRNPEDLSGKDGDIILAEFCEEHPPLMNQVGMCSKIKNYYKRKAEKDSGPQDYVYGEVAF 788
Query: 714 GNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRR 773
+ SPFLG + G +LE NMYRAP++ HK++ TDFL++R+ + IR
Sbjct: 789 AHT--------SPFLGILHPGQCIQALENNMYRAPIYQHKMSITDFLIIRT-RSNYWIRA 839
Query: 774 IDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQ 833
++ V V Q+ PL EV P SK ++ + + V +YR F + R I +D++
Sbjct: 840 VNAVFTVGQECPLYEVPGPNSKRANNFTRDFLQVFIYRLFWKS--RDNPRRIRMDDVKRA 897
Query: 834 FPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQA 893
FP SE+ IRK+LK+CA +R G W +K F +PSE ++R + PE C+Y SM A
Sbjct: 898 FPAHSESSIRKRLKQCADFKRTGMDSNWWVIKPEFRLPSEEEIRAMVSPEQCCAYFSMIA 957
Query: 894 GLYRLKHLGITQLTL--PASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACT 951
RLK G + +L P +QL D+ E+++ PWN + ++
Sbjct: 958 AEQRLKDAGYGEKSLFAPQEDDDEEAQLLDD------------EVKVAPWNTTRAYI--- 1002
Query: 952 NQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDAD 1011
Q L+++G DP+G G GFSYVR K + + K+ ++ +VTGTDAD
Sbjct: 1003 -QAMRGKCLLQLSGPADPTGCGEGFSYVRVPNKPTQT-----KEEQESQPKRSVTGTDAD 1056
Query: 1012 LRRLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG-------------- 1057
LRRL ++ A+E+L KF VPEE I K TRW I ++R LS+E+A +G
Sbjct: 1057 LRRLPLQRAKELLRKFKVPEEEIKKLTRWEVIDVVRTLSTEKAKAGEEGMDKFSRGNRFS 1116
Query: 1058 -VQLQQQTRGKCQEIWDRQVQSLSAAD 1083
+ Q++ + +CQ I+D Q + L++++
Sbjct: 1117 IAEHQERYKEECQRIFDLQNRVLASSE 1143
>gi|443709550|gb|ELU04183.1| hypothetical protein CAPTEDRAFT_225982 [Capitella teleta]
Length = 1867
Score = 251 bits (642), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 195/673 (28%), Positives = 307/673 (45%), Gaps = 112/673 (16%)
Query: 519 KRFSKHSLQNRDMMEGSWLDNIIWE--PVDAVGKPK-LILDLQDEQMLFEI-----LDNK 570
K FS ++N D++ G W D+IIW+ VD++ P L LD DE ++ EI D+
Sbjct: 438 KWFSIFPVENEDLIYGRWEDDIIWDNSDVDSIPNPNILTLDPNDENIILEIPEDRNPDST 497
Query: 571 DDEHP---------------LLHAGAMIITRSAKPSDFKPAESVK--------LFY---- 603
DD LL+ +I + + + +K +Y
Sbjct: 498 DDTQAATTAKKEKEIRKSRQLLNKAGIIKEEEEEVEEEEETLQLKDPFNLSNDEYYNPKL 557
Query: 604 ---------LGKELEDHKSLADQNVRPNSLIHL----IRTKIHLLPRAQKLPGENKSLRP 650
+G L H + A + +P HL +RT H P + G S
Sbjct: 558 TTDSALGRNMGASLIQHSTPAAELRQPFFPTHLGPMKLRT-FHRPPLKKYSHGPMASFNH 616
Query: 651 PGAFKKKSDLSVKDGHVFLM----------------EYCEERPLLLSNAGMGANLCTYYQ 694
P + ++ G +F M EY EE P L++ GM + + +Y+
Sbjct: 617 PHPTRDSERMASGGGDMFFMRTSEDLTGKDGDIILIEYSEEYPPLINQVGMASKIKIFYK 676
Query: 695 KSSPGDQAGALLCSGNNCLGNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKV 754
+ D G + SPFLG + G + S+E NMYRAP++ H V
Sbjct: 677 RKPGKDNHPPQYDLGELVYAHT--------SPFLGTLVPGQALPSIENNMYRAPIYCHDV 728
Query: 755 ATTDFLLVRSAKGKISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFS 814
+DFL++R+ + IR + K+ V Q PLMEV P SK + + + V +YR F
Sbjct: 729 PESDFLIIRT-RQHFYIREVAKIYTVGQCCPLMEVPGPNSKKANNFLRDFLQVFIYRLFW 787
Query: 815 AAAKRGLLPCIGVDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEG 874
+ I ++E+ FP+ SE+ IRK+LK CA +R G W +K + +P E
Sbjct: 788 KSKDNPRR--IKMEEIKKAFPSHSESSIRKRLKLCADFKRTGIDSNWWVLKPDYRLPEEE 845
Query: 875 DLRKLAYPEHVCSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIER 934
++R + PE C++ SM A RLK G + +L A +E +A +E
Sbjct: 846 EMRAMVSPEQCCAFYSMLAAEQRLKDAGYGEKSLFAQ---------EEDNEEESAMKMED 896
Query: 935 ELQITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKK 994
E++ PWN + +++ + L +TG+ DP+G G GFSYV+ K
Sbjct: 897 EVRTAPWNTTRAYISAM----KGRCLLSLTGIADPTGCGEGFSYVKVPNKPQQQK---DD 949
Query: 995 KAAANRGGSTVTGTDADLRRLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQA 1054
+A+ TVTGTDADLRRLS++ A+++L KF VPE I K +RW I ++R +S+EQA
Sbjct: 950 NSASTPAKKTVTGTDADLRRLSLKDAKQLLKKFGVPEGEIKKLSRWEVIDVVRTMSTEQA 1009
Query: 1055 ASG-----------------VQLQQQTRGKCQEIWDRQVQSLSAAD---DDEIGSDSEHS 1094
+G + Q++ + +CQ I+D Q + LS+ + DE S+++ S
Sbjct: 1010 KAGQEGEGMSKFARGNRFSTAEHQERYKEECQRIFDLQNRVLSSKEVLSTDEESSEADDS 1069
Query: 1095 DLDSFAGDLENLL 1107
D + +LEN+L
Sbjct: 1070 DFEEMGKNLENML 1082
Score = 41.6 bits (96), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 32/55 (58%)
Query: 8 SASKDGRDEDDEEEYEDVSGGNRLLGFMFGNVDYAGDLDVDYLDEDAKEHLAAVA 62
S +D + D+EE+ + L GF+FGN+D G L+ D LDED+K L ++
Sbjct: 3 SDHEDDHEMDNEEDAAPSARNTTLTGFLFGNIDKHGQLEEDLLDEDSKRQLGELS 57
>gi|327287054|ref|XP_003228244.1| PREDICTED: transcription initiation factor TFIID subunit 1-like
[Anolis carolinensis]
Length = 1898
Score = 251 bits (641), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 162/472 (34%), Positives = 240/472 (50%), Gaps = 46/472 (9%)
Query: 654 FKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCL 713
+ DL+ KDG + L EY EE L+ GM + YY K PG GA C
Sbjct: 659 MRTPQDLTGKDGDLILAEYSEENAPLMMQVGMATKIKNYY-KRKPGKDPGAPDCK----Y 713
Query: 714 GNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRR 773
G + SPFLG + G + E N++RAP++ HK+ TDFL++R+ +G IR
Sbjct: 714 GETVYCH---TSPFLGSLHPGQLLQAFENNLFRAPIYLHKMPETDFLIIRTRQG-YYIRE 769
Query: 774 IDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQ 833
+ + VV Q+ L EV P SK T+ + + V +YR F + R I ++++
Sbjct: 770 LVDIFVVGQECSLFEVPGPNSKRANTHIRDFLQVFIYRLFWKSRDRPRR--IRMEDIKKA 827
Query: 834 FPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQA 893
FP+ SE+ IRK+LK CA +R G W +K F +P+E ++R + PE C+Y SM +
Sbjct: 828 FPSHSESSIRKRLKLCADFKRTGMDSNWWVLKPDFRLPTEEEIRAMVSPEQCCAYYSMIS 887
Query: 894 GLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQ 953
RLK G + + A P+E I+ E++ PWN + F+A
Sbjct: 888 AEQRLKDAGYGEKSFFA---------PEEENEEDFQMKIDDEVRTAPWNTTRAFIAAM-- 936
Query: 954 DRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLR 1013
+ LE+TGV DP+G G GFSYV+ K + K TVTGTDADLR
Sbjct: 937 --KGKCLLEVTGVADPTGCGEGFSYVKIPNKPTQQ----KDDKEPQPVKKTVTGTDADLR 990
Query: 1014 RLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------V 1058
RLS++ A+++L KF VPEE I K +RW I ++R +S+EQA SG
Sbjct: 991 RLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSKFARGSRFSVA 1050
Query: 1059 QLQQQTRGKCQEIWDRQVQSLSAAD---DDEIGSDSEHSDLDSFAGDLENLL 1107
+ Q++ + +CQ I+D Q + L + + D S +E SD + ++EN+L
Sbjct: 1051 EHQERYKEECQRIFDLQNKVLESTEILSTDTDSSSAEDSDFEEMGKNIENML 1102
Score = 40.8 bits (94), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 521 FSKHSLQNRDMMEGSWLDNIIW--EPVDAV-GKPKLILDLQDEQMLFEILDNKDD 572
FS + N +++ G W DNIIW E ++ V P L LD DE ++ EI D K++
Sbjct: 459 FSIFPIDNEELVYGRWEDNIIWDDEAMETVLAPPVLTLDPNDENIILEIPDEKEE 513
>gi|357604233|gb|EHJ64104.1| hypothetical protein KGM_10653 [Danaus plexippus]
Length = 1819
Score = 251 bits (640), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 150/440 (34%), Positives = 234/440 (53%), Gaps = 45/440 (10%)
Query: 659 DLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLT 718
DLS +DG + L+E+CEE P L+S GM + YY++++ D + G +
Sbjct: 657 DLSGRDGDLVLVEFCEEHPPLISQVGMCTKIKNYYKRTATKDNGPKPMKYGEIAYAHT-- 714
Query: 719 LEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRRIDKVA 778
SPFLG + G +Q +E NMYRAP++ H +++TDFL++R+ + IR +D +
Sbjct: 715 ------SPFLGILPPGATQPVVENNMYRAPIYEHTLSSTDFLIIRTRQA-YYIREVDALF 767
Query: 779 VVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLS 838
V Q+ PL EV P SK + + + V +YR F + R I +D++ FP+ S
Sbjct: 768 VAGQECPLYEVPGPNSKRANNFVRDFLQVFIYRLFWKS--RDNPRRIKMDDIKRAFPSHS 825
Query: 839 EAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRL 898
E+ IRK+LK CA +R G W +K F +PSE ++R + PE C+Y SM A RL
Sbjct: 826 ESSIRKRLKLCADFKRTGTDSNWWVIKPDFRLPSEEEIRAMVSPEQCCAYFSMAAAEQRL 885
Query: 899 KHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENI 958
K G + + + DE + L ++ E+++ PWN + ++ Q
Sbjct: 886 KDAGYGEKFI-----FTPQEDDDEELQL----KMDDEVKVAPWNTTRAYI----QAMRGK 932
Query: 959 ERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLRRLSME 1018
L++TGV DP+G G GFSYVR V + ++ + TVTGTDADLRRLS+
Sbjct: 933 CLLQLTGVADPTGCGEGFSYVR------VPNKPTQQPNEEQQPKRTVTGTDADLRRLSLN 986
Query: 1019 AAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------VQLQQQ 1063
A+ +L KF VPEE I K +RW I ++R LS+E+A +G + Q++
Sbjct: 987 NAKALLRKFGVPEEEIKKLSRWEVIDVVRTLSTEKAKAGEEGMTKFSRGNRFSIAEHQER 1046
Query: 1064 TRGKCQEIWDRQVQSLSAAD 1083
+ +CQ I++ Q + L++ +
Sbjct: 1047 YKEECQRIFELQNRVLTSTE 1066
>gi|195389747|ref|XP_002053536.1| GJ23295 [Drosophila virilis]
gi|194151622|gb|EDW67056.1| GJ23295 [Drosophila virilis]
Length = 2134
Score = 251 bits (640), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 152/447 (34%), Positives = 236/447 (52%), Gaps = 49/447 (10%)
Query: 654 FKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCL 713
+ DLS KDG + L E+CEE P L++ GM + + YY++ + D G
Sbjct: 737 MRNPEDLSGKDGDIVLAEFCEEHPPLMNQVGMCSKIKNYYKRKAEKDSGPQDYVYGEVAF 796
Query: 714 GNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRR 773
+ SPFLG + G +LE NMYRAP++ HK++ TDFL++R+ + IR
Sbjct: 797 AHT--------SPFLGILHPGQCIQALENNMYRAPIYPHKMSPTDFLIIRT-RNSYWIRV 847
Query: 774 IDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQ 833
++ + V Q+ PL EV P SK ++ + + V +YR F + R I +D++
Sbjct: 848 VNAIFTVGQECPLYEVPGPNSKRANNFTRDFLQVFIYRLFWKS--RDNPRRIRMDDVKRA 905
Query: 834 FPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQA 893
FP SE+ IRK+LK+CA +R G W +K F +PSE ++R + PE C+Y SM A
Sbjct: 906 FPAHSESSIRKRLKQCADFKRTGMDSNWWVIKPEFRLPSEEEIRAMVSPEQCCAYFSMIA 965
Query: 894 GLYRLKHLGITQLTL--PASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACT 951
RLK G + +L P +QL D+ E+++ PWN + ++
Sbjct: 966 AEQRLKDAGYGEKSLFAPQEDDDEEAQLLDD------------EVKVAPWNTTRAYI--- 1010
Query: 952 NQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDAD 1011
Q L+++G DP+G G GFSYVR K + + K+ ++ +VTGTDAD
Sbjct: 1011 -QAMRGKCLLQLSGPADPTGCGEGFSYVRVPNKPTQT-----KEEQESQPKRSVTGTDAD 1064
Query: 1012 LRRLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG-------------- 1057
LRRL ++ A+E+L KF VPEE I K TRW I ++R LS+E+A +G
Sbjct: 1065 LRRLPLQRAKELLRKFKVPEEEIKKLTRWEVIDVVRTLSTEKAKAGEEGMDKFSRGNRFS 1124
Query: 1058 -VQLQQQTRGKCQEIWDRQVQSLSAAD 1083
+ Q++ + +CQ I+D Q + L++++
Sbjct: 1125 IAEHQERYKEECQRIFDLQNRVLASSE 1151
>gi|391340093|ref|XP_003744380.1| PREDICTED: LOW QUALITY PROTEIN: transcription initiation factor TFIID
subunit 1-like [Metaseiulus occidentalis]
Length = 1774
Score = 251 bits (640), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 156/438 (35%), Positives = 228/438 (52%), Gaps = 44/438 (10%)
Query: 659 DLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLT 718
DLS KDG + L EY EE P L+ GM + YY K PG L G L +
Sbjct: 632 DLSGKDGDLVLTEYSEEHPPLVMQIGMATKIKNYY-KRKPGKDNTPELHFGEMTLAHT-- 688
Query: 719 LEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRRIDKVA 778
SPFLG + G Q + E N++RAP++ H++ +DFL++R+ + +R +D +
Sbjct: 689 ------SPFLGQLAPGKCQPAFENNLFRAPMYEHQLPMSDFLIIRT-RQHYYVREVDVIF 741
Query: 779 VVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLS 838
V Q+ PL EV P SK + + + V +YR F + I ++++ FPN S
Sbjct: 742 TVGQELPLYEVPGPNSKRANNFIRDFLQVFIYRLFWKSFDHPRR--IKMEDIRKAFPNHS 799
Query: 839 EAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRL 898
E+ IRK+LK CA +R G W +K F +P+E ++R + PE C Y SM A RL
Sbjct: 800 ESSIRKRLKLCADFKRTGMDSNWWVLKPDFRLPTEDEIRAMVSPEQCCGYYSMLAAEQRL 859
Query: 899 KHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENI 958
K G + +L + DE + I+ E++ PWN + F+ Q +
Sbjct: 860 KDAGYGEKSLFTA---------DEENEDDLQNKIDDEVKTAPWNTTRAFI----QAMKGK 906
Query: 959 ERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLRRLSME 1018
L++TGV DP+G G GFSYVR P V S ++K A + TVTGTDADLRRLS+
Sbjct: 907 CLLQLTGVADPTGCGEGFSYVR-IPNKPVQSKDEERKEAVKK---TVTGTDADLRRLSLS 962
Query: 1019 AAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------VQLQQQ 1063
A+ +L KF VPE+ I K TRW I ++R LS+EQA +G + Q++
Sbjct: 963 NAKNLLRKFAVPEDEIKKLTRWEVIDVVRTLSTEQAKAGEDGMSKFARGNRFSIAEHQER 1022
Query: 1064 TRGKCQEIWDRQVQSLSA 1081
+ +CQ ++D Q + LS+
Sbjct: 1023 YKEECQRLFDLQNRVLSS 1040
>gi|24020892|gb|AAN40844.1| TBP-associated factor RNA polymerase 1-like [Hylobates lar]
Length = 923
Score = 250 bits (638), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 163/467 (34%), Positives = 241/467 (51%), Gaps = 46/467 (9%)
Query: 659 DLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLT 718
DL+ KDG + L EY EE L+ GM + YY K PG GA C G +
Sbjct: 193 DLTGKDGDLILAEYSEENAPLMMQIGMATKINNYY-KRKPGKDPGAPDCK----YGETVC 247
Query: 719 LEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRRIDKVA 778
SPFLG + G + E N++RAP++ HK+ TDFL++R+ +G IR + +
Sbjct: 248 CH---TSPFLGSLHPGQLLQAFENNLFRAPIYLHKMPETDFLIIRTRQG-YYIRELVDIF 303
Query: 779 VVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLS 838
VV QQ PL EV P S+ + + + V +YR F + R I ++++ FP+ S
Sbjct: 304 VVGQQCPLFEVPGPNSRRANMHIRDFLQVFIYRLFWKSKDRPRR--IRMEDIKKAFPSHS 361
Query: 839 EAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRL 898
E+ IRK+LK CA +R G W +K F +P+E ++R PE C+Y SM A RL
Sbjct: 362 ESSIRKRLKLCADFKRTGMDSNWWVLKSDFRLPTEEEIRAKVSPEQCCAYYSMIAAEQRL 421
Query: 899 KHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENI 958
K G + + A P++ I+ E+ PWN + F+A +
Sbjct: 422 KDAGYGEKSFFA---------PEKEKEEDFQMKIDDEVHTAPWNTTRAFIAAM----KGK 468
Query: 959 ERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLRRLSME 1018
LE+TGV DP+G G GFSYV+ K + + +A TVTGTDADLRRLS++
Sbjct: 469 CLLEVTGVADPTGCGEGFSYVKIPNKPTQQKDDKEPQAVKK----TVTGTDADLRRLSLK 524
Query: 1019 AAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------VQLQQQ 1063
A+++L KF VPEE I K +RW I ++R +S+EQA SG + Q++
Sbjct: 525 NAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSKFARGSRFSVAEHQKR 584
Query: 1064 TRGKCQEIWDRQVQSLSAAD---DDEIGSDSEHSDLDSFAGDLENLL 1107
+ +CQ I+D Q + LS+ + D S +E SD++ ++EN+L
Sbjct: 585 YKEECQRIFDLQNKVLSSTEVLTTDTDSSSAEDSDIEEMRKNIENML 631
>gi|297684245|ref|XP_002819759.1| PREDICTED: TAF1 RNA polymerase II, TATA box binding protein
(TBP)-associated factor, 210kDa-like [Pongo abelii]
Length = 1830
Score = 250 bits (638), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 168/489 (34%), Positives = 250/489 (51%), Gaps = 56/489 (11%)
Query: 654 FKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCL 713
+ DL+ KDG + L EY EE L+ GM + YY K PG GA C
Sbjct: 690 MRTPQDLTGKDGDLILAEYSEENGPLMMQVGMATKIKNYY-KRKPGKDPGAPDCK----Y 744
Query: 714 GNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRR 773
G + SPFLG + G +LE N++RAP++ HK+ TDFL++R+ +G IR
Sbjct: 745 GETVYCH---TSPFLGSLHPGQLLQALENNLFRAPMYLHKMPETDFLIIRTRQG-YYIRE 800
Query: 774 IDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQ 833
+ + VV QQ PL EV P S+ + + + V +YR F + R I ++++
Sbjct: 801 LVDIFVVGQQCPLFEVPGPNSRRANMHIRDFLEVFIYRLFWKSKDRPRR--IRMEDIKKA 858
Query: 834 FPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQA 893
FP+ SE+ IRK+LK CA +R G W +K F +P+E ++R PE C+Y SM A
Sbjct: 859 FPSHSESSIRKRLKLCADFKRTGMDSNWWVLKSDFRLPTEEEIRAKVSPEQCCAYYSMIA 918
Query: 894 GLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQ 953
RLK G + + A + +E + I+ E+ PWN + F+A
Sbjct: 919 AKQRLKDAGYGEKSFFAP------EEDEEDFQMK----IDDEVHTAPWNTTRAFIAAM-- 966
Query: 954 DRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLR 1013
+ LE+TGV DP+G G GFSYV+ K + +K + TVTGTDADLR
Sbjct: 967 --KGKCLLEVTGVADPTGCGEGFSYVKIPNKPTK-----QKDDKELQAVKTVTGTDADLR 1019
Query: 1014 RLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------V 1058
RLS++ A+++L KF VPEE I K +RW I ++R +S+EQA SG
Sbjct: 1020 RLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSKFARGSRFSVA 1079
Query: 1059 QLQQQTRGKCQEIWDRQVQSLSAAD---DDEIGSDSEHSDLDSFAGDLENLLD------- 1108
+ Q++ + +CQ I+D Q + LS+ + D S +E SD + ++EN+L
Sbjct: 1080 EHQERYKEECQRIFDLQNKVLSSTEVLSTDTDSSSAEDSDFEEMGKNIENMLQNKKTSSQ 1139
Query: 1109 -AEEFEEEE 1116
+ E+EE+E
Sbjct: 1140 LSREWEEQE 1148
>gi|390336363|ref|XP_003724333.1| PREDICTED: transcription initiation factor TFIID subunit 1-like
isoform 1 [Strongylocentrotus purpuratus]
Length = 1951
Score = 250 bits (638), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 157/481 (32%), Positives = 248/481 (51%), Gaps = 53/481 (11%)
Query: 659 DLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLT 718
DLS DGH+ + EYCEE P + GM + YY++ D L G NV +
Sbjct: 734 DLSGMDGHLIMTEYCEEYPPQMMQVGMATRITNYYKRKPSSDAKPPLHEYGETI--NVHS 791
Query: 719 LEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRRIDKVA 778
SPFLG ++ G S + E N++RAP++ HKV TTDFLL+R+ + K IR ++ +
Sbjct: 792 ------SPFLGSLRPGQSLQAFENNLFRAPLYKHKVPTTDFLLIRT-RHKYHIRALNDIF 844
Query: 779 VVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLS 838
V QQ PL+EV P SK + + + V +YR F + R I ++++ FP S
Sbjct: 845 TVGQQYPLLEVPGPNSKKSNNHIRDFLQVFIYRLFLKSIDRPRR--IKMEDIKKAFPTHS 902
Query: 839 EAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRL 898
E+ IRK+LK CA +R G W MK F +PSE ++R + PE C+Y SMQ RL
Sbjct: 903 ESSIRKRLKLCADFKRTGLDSNWWVMKPDFRLPSEEEIRAMVSPELCCAYYSMQGAEQRL 962
Query: 899 KHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENI 958
K G + + A + + I+ E++ PWN + F+A +
Sbjct: 963 KDAGYGEKSFFAPDNDDD----------DDNAKIDDEVKTAPWNTTRAFIAAM----KGK 1008
Query: 959 ERLEITGVGDPSGRGLGFSYVRAAPK-------ASVSSAMVKKKAA--ANRGGSTVTGTD 1009
L +TGV DP+G G GFSY++ K ++ ++++ +A + TVTGTD
Sbjct: 1009 CLLAVTGVADPTGCGEGFSYIKVPNKPMQQKGETNLPMSLMQDEAVEKPTQPKKTVTGTD 1068
Query: 1010 ADLRRLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG------------ 1057
ADLRRL+++ A+++L F + EE I K +RW I ++R S++QA +G
Sbjct: 1069 ADLRRLNLKQAKQLLRNFGIAEEDIKKLSRWEVIDVVRTYSTQQARTGDSTTSKFARGNR 1128
Query: 1058 ---VQLQQQTRGKCQEIWDRQVQSLS----AADDDEIGSDSEHSDLDSFAGDLENLLDAE 1110
+ Q++ + +CQ I+D Q + LS + D++ + E SD + ++E +L ++
Sbjct: 1129 FGIAEHQERYKEECQRIFDLQSKVLSNTEVSTDEESSSGEGEDSDFEEMGKNIEVMLSSK 1188
Query: 1111 E 1111
+
Sbjct: 1189 K 1189
Score = 42.7 bits (99), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 7/51 (13%)
Query: 12 DGRDEDDEEEYEDVSGGNRLLGFMFGNVDYAGDLDVDYLDEDAKEHLAAVA 62
D DED E+ L GFMFGN++ +G L+ D LDE+AK HL+ +
Sbjct: 2 DSEDEDGAPEFS-------LTGFMFGNINKSGQLENDLLDEEAKCHLSGLG 45
>gi|390336367|ref|XP_786789.3| PREDICTED: transcription initiation factor TFIID subunit 1-like
isoform 3 [Strongylocentrotus purpuratus]
Length = 1944
Score = 250 bits (638), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 157/481 (32%), Positives = 248/481 (51%), Gaps = 53/481 (11%)
Query: 659 DLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLT 718
DLS DGH+ + EYCEE P + GM + YY++ D L G NV +
Sbjct: 727 DLSGMDGHLIMTEYCEEYPPQMMQVGMATRITNYYKRKPSSDAKPPLHEYGETI--NVHS 784
Query: 719 LEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRRIDKVA 778
SPFLG ++ G S + E N++RAP++ HKV TTDFLL+R+ + K IR ++ +
Sbjct: 785 ------SPFLGSLRPGQSLQAFENNLFRAPLYKHKVPTTDFLLIRT-RHKYHIRALNDIF 837
Query: 779 VVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLS 838
V QQ PL+EV P SK + + + V +YR F + R I ++++ FP S
Sbjct: 838 TVGQQYPLLEVPGPNSKKSNNHIRDFLQVFIYRLFLKSIDRPRR--IKMEDIKKAFPTHS 895
Query: 839 EAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRL 898
E+ IRK+LK CA +R G W MK F +PSE ++R + PE C+Y SMQ RL
Sbjct: 896 ESSIRKRLKLCADFKRTGLDSNWWVMKPDFRLPSEEEIRAMVSPELCCAYYSMQGAEQRL 955
Query: 899 KHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENI 958
K G + + A + + I+ E++ PWN + F+A +
Sbjct: 956 KDAGYGEKSFFAPDNDDD----------DDNAKIDDEVKTAPWNTTRAFIAAM----KGK 1001
Query: 959 ERLEITGVGDPSGRGLGFSYVRAAPK-------ASVSSAMVKKKAA--ANRGGSTVTGTD 1009
L +TGV DP+G G GFSY++ K ++ ++++ +A + TVTGTD
Sbjct: 1002 CLLAVTGVADPTGCGEGFSYIKVPNKPMQQKGETNLPMSLMQDEAVEKPTQPKKTVTGTD 1061
Query: 1010 ADLRRLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG------------ 1057
ADLRRL+++ A+++L F + EE I K +RW I ++R S++QA +G
Sbjct: 1062 ADLRRLNLKQAKQLLRNFGIAEEDIKKLSRWEVIDVVRTYSTQQARTGDSTTSKFARGNR 1121
Query: 1058 ---VQLQQQTRGKCQEIWDRQVQSLS----AADDDEIGSDSEHSDLDSFAGDLENLLDAE 1110
+ Q++ + +CQ I+D Q + LS + D++ + E SD + ++E +L ++
Sbjct: 1122 FGIAEHQERYKEECQRIFDLQSKVLSNTEVSTDEESSSGEGEDSDFEEMGKNIEVMLSSK 1181
Query: 1111 E 1111
+
Sbjct: 1182 K 1182
Score = 42.7 bits (99), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 7/51 (13%)
Query: 12 DGRDEDDEEEYEDVSGGNRLLGFMFGNVDYAGDLDVDYLDEDAKEHLAAVA 62
D DED E+ L GFMFGN++ +G L+ D LDE+AK HL+ +
Sbjct: 2 DSEDEDGAPEFS-------LTGFMFGNINKSGQLENDLLDEEAKCHLSGLG 45
>gi|195446452|ref|XP_002070787.1| GK12244 [Drosophila willistoni]
gi|194166872|gb|EDW81773.1| GK12244 [Drosophila willistoni]
Length = 2118
Score = 250 bits (638), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 151/445 (33%), Positives = 234/445 (52%), Gaps = 44/445 (9%)
Query: 654 FKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCL 713
+ DLS KDG + L E+CEE P L++ GM + + YY++ + D G
Sbjct: 687 MRNPEDLSGKDGDIILTEFCEEHPPLMNQVGMCSKIKNYYKRKAEKDSGPQHYVYGEVAF 746
Query: 714 GNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRR 773
+ SPFLG + G +LE NMYRAP++ HK++ DFL++R+ G IR
Sbjct: 747 AHT--------SPFLGILHPGQCIQALENNMYRAPIYQHKMSHNDFLIIRTRSG-YWIRA 797
Query: 774 IDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQ 833
++ + V Q+ PL EV P SK ++ + + V +YR F + R I +D++
Sbjct: 798 VNAIFTVGQECPLYEVPGPNSKRANNFTRDFLQVFIYRLFWNS--RDNPRRIRMDDIKRA 855
Query: 834 FPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQA 893
FP SE+ IRK+LK+CA +R G W +K F +PSE ++R + PE C+Y SM A
Sbjct: 856 FPAHSESSIRKRLKQCADFKRTGMDSNWWVIKPEFRLPSEEEIRAMVSPEQCCAYFSMIA 915
Query: 894 GLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQ 953
RLK G + L A P E A ++ E+++ PWN + ++ Q
Sbjct: 916 AEQRLKDAGYGEKFLFA---------PQEDDDEEAQLKLDDEVKVAPWNTTRAYI----Q 962
Query: 954 DRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLR 1013
L+++G DP+G G GFSYVR K + + K+ ++ +VTGTDADLR
Sbjct: 963 AMRGKCLLQLSGPADPTGCGEGFSYVRVPNKPTQT-----KEEQESQPKRSVTGTDADLR 1017
Query: 1014 RLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------V 1058
RL ++ A+E+L KF VPEE I K +RW I ++R LS+E+A +G
Sbjct: 1018 RLPLQRAKELLRKFKVPEEEIKKLSRWEVIDVVRTLSTEKAKAGEEGMDKFSRGNRFSIA 1077
Query: 1059 QLQQQTRGKCQEIWDRQVQSLSAAD 1083
+ Q++ + +CQ I+D Q + L++++
Sbjct: 1078 EHQERYKEECQRIFDLQNRVLASSE 1102
>gi|449669418|ref|XP_002165373.2| PREDICTED: transcription initiation factor TFIID subunit 1-like
[Hydra magnipapillata]
Length = 1847
Score = 249 bits (637), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 162/479 (33%), Positives = 242/479 (50%), Gaps = 57/479 (11%)
Query: 654 FKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCL 713
++ DLS DG + LMEYCEE P LLS AGM + + Y+ + +
Sbjct: 637 MREPEDLSGMDGDIVLMEYCEEMPPLLSQAGMNSRIKNYFNRKHGKEPP----------- 685
Query: 714 GNVLTLEPGD-----KSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGK 768
TLE G+ SPFLG ++ G +LE N++RAP++ H++ +TDFLL + A G
Sbjct: 686 ----TLEYGEISYIHHSPFLGQLQQGQIVQALENNLFRAPIYQHRIYSTDFLLFKIAHG- 740
Query: 769 ISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVD 828
IR + + V Q P EV P SK + + + + +YR F + + I ++
Sbjct: 741 YYIRNLSVIFTVGQLCPKCEVPGPNSKRSNNHIRDFLQIFIYRLFWKSPDKPRR--IKME 798
Query: 829 ELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSY 888
++ FP SE+ +RK+LK CA RR G W +K F +PSE ++R PE C Y
Sbjct: 799 DIRKAFPKHSESSVRKRLKLCADFRRTGADCNWWVLKPDFRLPSEEEMRANVTPEQTCCY 858
Query: 889 ESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFV 948
M A RLK G + +L A PD+ A I+ E+QI PWN + ++
Sbjct: 859 YMMLAAEQRLKDAGYGEKSLFA---------PDDDDNENDAKKIDDEIQIAPWNTTRAYI 909
Query: 949 ACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGT 1008
Q + L++TGV DP+G G GFSY+R K +++ A + VTGT
Sbjct: 910 ----QAMKGKCLLQVTGVADPTGCGEGFSYIRIPNKPITGKDETEEQKQAKK-QKLVTGT 964
Query: 1009 DADLRRLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASGV---------- 1058
DADLRRL+++ AR +L +FNVP++ I K +RW I +R +S+E A G
Sbjct: 965 DADLRRLNLKQARILLKEFNVPQDEIQKLSRWEVIDKVRTMSTEAAKQGTTEVAMNKFAR 1024
Query: 1059 -------QLQQQTRGKCQEIWDRQVQSLSA---ADDDEIGSDSEHSDLDSFAGDLENLL 1107
+ Q++ + +CQ I+D Q + LS+ DE S E SD++ DLE++L
Sbjct: 1025 GSRFTVAEHQERYKDECQRIFDLQNKVLSSDAILSTDEESSGDEESDMEDLGKDLESML 1083
Score = 47.0 bits (110), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 73/165 (44%), Gaps = 36/165 (21%)
Query: 23 EDVSGGNRLLGFMFGNVDYAGDLDVDYLDEDAKEHLAAVAD--KLGPSLTDIDVWNSQSC 80
++VS G L GF+FGN+D +G L+ D+ D+DA L +A+ L + DI +Q
Sbjct: 3 KEVSDG-LLAGFLFGNIDESGRLENDFFDQDAANQLGQLAEFGALQSLVHDISEEKTQDE 61
Query: 81 FQLFCSYCLLSVNSPQPPVDAVEQDYDKKAEDAVDYEDIDEQ----YE----GPEIQIAS 132
F Q++ +K+ D+VDY +IDE YE P + I
Sbjct: 62 F-------------------GTVQEFTQKSSDSVDYSNIDELADDFYEQSTSKPILCIKK 102
Query: 133 EE------DYLLPKKEYFAAEVSLAALKPTASPFDDENYDEDEEL 171
E+ D + K F + L ++ P A D E DE +L
Sbjct: 103 EQDDYNDYDEVKEKNHDFPLLIPLPSIVPKAETMDVEETDEVNDL 147
>gi|194742064|ref|XP_001953527.1| GF17182 [Drosophila ananassae]
gi|190626564|gb|EDV42088.1| GF17182 [Drosophila ananassae]
Length = 2141
Score = 249 bits (636), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 151/445 (33%), Positives = 234/445 (52%), Gaps = 44/445 (9%)
Query: 654 FKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCL 713
+ DLS KDG + L E+CEE P L++ GM + + YY++ + D G
Sbjct: 713 MRNPEDLSGKDGDIVLAEFCEEHPPLMNQVGMCSKIKNYYKRKAEKDSGPQDYVYGEVAF 772
Query: 714 GNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRR 773
+ SPFLG + G +LE NMYRAP++ HK++ DFL++R+ G IR
Sbjct: 773 AHT--------SPFLGILHPGQCIQALENNMYRAPIYPHKMSHNDFLVIRTRTG-YWIRA 823
Query: 774 IDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQ 833
++ + V Q+ P+ EV P SK ++ + + V +YR F + R I +D++
Sbjct: 824 VNAIFTVGQECPIYEVPGPNSKRANNFTRDFLQVFIYRLFWKS--RDNPRRIRMDDIKKA 881
Query: 834 FPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQA 893
FP SE+ IRK+LK+CA +R G W +K F +PSE ++R + PE C+Y SM A
Sbjct: 882 FPAHSESSIRKRLKQCADFKRTGMDSNWWVIKPEFRLPSEEEIRAMVSPEQCCAYFSMIA 941
Query: 894 GLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQ 953
RLK G + L A P E A ++ E+++ PWN + ++ Q
Sbjct: 942 AEQRLKDAGYGEKFLFA---------PQEDDDEEAQLKLDDEVKVAPWNTTRAYI----Q 988
Query: 954 DRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLR 1013
L+++G DP+G G GFSYVR K + S K+ ++ +VTGTDADLR
Sbjct: 989 AMRGKCLLQLSGPADPTGCGEGFSYVRVPNKPTQS-----KEEQESQPKRSVTGTDADLR 1043
Query: 1014 RLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------V 1058
RL ++ A+E+L KF VPEE I K +RW I ++R LS+E+A +G
Sbjct: 1044 RLPLQRAKELLRKFKVPEEEIKKLSRWEVIDVVRTLSTEKAKAGEEGMDKFSRGNRFSIA 1103
Query: 1059 QLQQQTRGKCQEIWDRQVQSLSAAD 1083
+ Q++ + +CQ I+D Q + L++++
Sbjct: 1104 EHQERYKEECQRIFDLQNRVLASSE 1128
>gi|380018182|ref|XP_003693014.1| PREDICTED: transcription initiation factor TFIID subunit 1-like [Apis
florea]
Length = 1901
Score = 249 bits (635), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 161/478 (33%), Positives = 252/478 (52%), Gaps = 49/478 (10%)
Query: 621 PNSLIHLIRTKIHLLPRAQKLPGENKSLRPPGAF--KKKSDLSVKDGHVFLMEYCEERPL 678
P+S++ LI+ H+ +A++ E + F + DL+ KDG + L+E+ EE P
Sbjct: 640 PHSVLPLIK---HIKKKAKQREQERIASGGGDVFFMRTPEDLTGKDGELVLIEFSEEHPP 696
Query: 679 LLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLTLEPGDKSPFLGDIKAGCSQS 738
L++ GM + + YY++ + DQ G + SPFLG + G S
Sbjct: 697 LMNQVGMCSKVKNYYKRKAGKDQGPQKYKYGETAYAHT--------SPFLGILTPGQSIQ 748
Query: 739 SLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRRIDKVAVVAQQEPLMEVMSPGSKNLQ 798
++E NMYRAP++ HK+ TDFL++R+ + + IR +D + V Q+ PL EV P SK
Sbjct: 749 AVENNMYRAPIYEHKIPETDFLVIRT-RQQYYIREVDALFVAGQECPLYEVPGPNSKRAN 807
Query: 799 TYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLSEAIIRKKLKECAFLRRDGNG 858
+ + + V +YR F + R I +D++ FP+ SE+ IRK+LK CA +R G
Sbjct: 808 NFVRDFLQVFIYRLFWKS--RDTPRRIKMDDIKRAFPSHSESSIRKRLKLCADFKRTGMD 865
Query: 859 KQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRLKHLGITQLTLPASISSAMSQ 918
W +K F +P+E ++R + PE C+Y SM A RLK G + L
Sbjct: 866 SNWWVIKPDFRLPTEEEIRAMVSPEQCCAYFSMIAAEQRLKDAGYGEKFLFTPQDDD--- 922
Query: 919 LPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSY 978
DE + L ++ E+++ PWN + ++ Q + L++ G DP+G G GFSY
Sbjct: 923 --DEEMQLK----MDDEVKVAPWNTTRAYI----QAMKGKCLLQLAGPADPTGCGEGFSY 972
Query: 979 VRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLRRLSMEAAREVLLKFNVPEEMIAKQT 1038
VR K ++S +++A R TVTGTDADLRRLS+ A+ +L KF VPEE I K +
Sbjct: 973 VRVPNKPTISKE--EQEAQPKR---TVTGTDADLRRLSLNNAKALLRKFGVPEEEIKKLS 1027
Query: 1039 RWHRIAMIRKLSSEQAASG---------------VQLQQQTRGKCQEIWDRQVQSLSA 1081
RW I ++R LS+E+A +G + Q++ + +CQ I+D Q + LS+
Sbjct: 1028 RWEVIDVVRTLSTEKAKAGEEGMTKFSRGNRFSIAEHQERYKEECQRIFDLQNRVLSS 1085
Score = 44.7 bits (104), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 57/104 (54%), Gaps = 1/104 (0%)
Query: 18 DEEEYEDVSGGNRLLGFMFGNVDYAGDLDVDYLDEDAKEHLAAVADKLGPSLTDIDVWNS 77
+EE +D+ G + GF+FGN+D G L+ D LD +AK+H+ ++ ++LG S ++ +
Sbjct: 5 EEENDKDIISGINMTGFLFGNIDDNGQLEDDILDPEAKQHITSL-NRLGLSSFIREMMLN 63
Query: 78 QSCFQLFCSYCLLSVNSPQPPVDAVEQDYDKKAEDAVDYEDIDE 121
+ + + + D + +Y +K+ A+D+ DI+E
Sbjct: 64 EDVTEEKGNESNDKIEEENDTTDEKDINYVEKSPSALDFSDINE 107
>gi|328789024|ref|XP_395639.4| PREDICTED: LOW QUALITY PROTEIN: transcription initiation factor TFIID
subunit 1 [Apis mellifera]
Length = 1846
Score = 249 bits (635), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 161/478 (33%), Positives = 252/478 (52%), Gaps = 49/478 (10%)
Query: 621 PNSLIHLIRTKIHLLPRAQKLPGENKSLRPPGAF--KKKSDLSVKDGHVFLMEYCEERPL 678
P+S++ LI+ H+ +A++ E + F + DL+ KDG + L+E+ EE P
Sbjct: 640 PHSVLPLIK---HIKKKAKQREQERIASGGGDVFFMRTPEDLTGKDGELVLIEFSEEHPP 696
Query: 679 LLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLTLEPGDKSPFLGDIKAGCSQS 738
L++ GM + + YY++ + DQ G + SPFLG + G S
Sbjct: 697 LMNQVGMCSKVKNYYKRKAGKDQGPQKYKYGETAYAHT--------SPFLGILTPGQSIQ 748
Query: 739 SLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRRIDKVAVVAQQEPLMEVMSPGSKNLQ 798
++E NMYRAP++ HK+ TDFL++R+ + + IR +D + V Q+ PL EV P SK
Sbjct: 749 AVENNMYRAPIYEHKIPETDFLVIRT-RQQYYIREVDALFVAGQECPLYEVPGPNSKRAN 807
Query: 799 TYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLSEAIIRKKLKECAFLRRDGNG 858
+ + + V +YR F + R I +D++ FP+ SE+ IRK+LK CA +R G
Sbjct: 808 NFVRDFLQVFIYRLFWKS--RDTPRRIKMDDIKRAFPSHSESSIRKRLKLCADFKRTGMD 865
Query: 859 KQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRLKHLGITQLTLPASISSAMSQ 918
W +K F +P+E ++R + PE C+Y SM A RLK G + L
Sbjct: 866 SNWWVIKPDFRLPTEEEIRAMVSPEQCCAYFSMIAAEQRLKDAGYGEKFLFTPQDDD--- 922
Query: 919 LPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSY 978
DE + L ++ E+++ PWN + ++ Q + L++ G DP+G G GFSY
Sbjct: 923 --DEEMQLK----MDDEVKVAPWNTTRAYI----QAMKGKCLLQLAGPADPTGCGEGFSY 972
Query: 979 VRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLRRLSMEAAREVLLKFNVPEEMIAKQT 1038
VR K ++S +++A R TVTGTDADLRRLS+ A+ +L KF VPEE I K +
Sbjct: 973 VRVPNKPTISKE--EQEAQPKR---TVTGTDADLRRLSLNNAKALLRKFGVPEEEIKKLS 1027
Query: 1039 RWHRIAMIRKLSSEQAASG---------------VQLQQQTRGKCQEIWDRQVQSLSA 1081
RW I ++R LS+E+A +G + Q++ + +CQ I+D Q + LS+
Sbjct: 1028 RWEVIDVVRTLSTEKAKAGEEGMTKFSRGNRFSIAEHQERYKEECQRIFDLQNRVLSS 1085
Score = 40.0 bits (92), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
Query: 18 DEEEYEDVSGGNRLLGFMFGNVDYAGDLDVDYLDEDAKEHLAAVADKLGPSLTDIDVWNS 77
+EE +D+ G + GF+FGN+D L+ D LD +AK H A++ ++LG S ++ +
Sbjct: 5 EEENDKDIISGINMTGFLFGNIDDTVQLEDDILDPEAKPHRASL-NRLGLSSFIREMMLN 63
Query: 78 QSCFQLFCSYCLLSVNSPQPPVDAVEQDYDKKAEDAVDYEDIDE 121
+ + + D + +Y +K+ A+D+ DI+E
Sbjct: 64 EDITAEKINESNDKIEEENDTTDEKDINYVEKSPSALDFSDINE 107
>gi|347970834|ref|XP_308108.5| AGAP003882-PA [Anopheles gambiae str. PEST]
gi|333466393|gb|EAA03907.5| AGAP003882-PA [Anopheles gambiae str. PEST]
Length = 2003
Score = 248 bits (634), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 155/468 (33%), Positives = 244/468 (52%), Gaps = 47/468 (10%)
Query: 659 DLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLT 718
DL+ +DG + L+E+CEE P L++ GM + + +Y++ D G +
Sbjct: 720 DLTGRDGELILIEFCEEHPPLMNQVGMASKIKNFYKRKMGKDPGPPEFRFGETHYAHT-- 777
Query: 719 LEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRRIDKVA 778
SPFLG + G ++E NMYRAP++ H + TDFL++R+ + +R +D +
Sbjct: 778 ------SPFLGILHHGQCIQAIENNMYRAPIYPHTIQETDFLVIRT-RNNYFVREMDALF 830
Query: 779 VVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLS 838
Q+ PL EV P SK + + + V +YR F + R I +D++ FP S
Sbjct: 831 TAGQECPLYEVPGPNSKRANNFVRDFLQVFIYRLFWKS--RDNPRKIRMDDIKKAFPAHS 888
Query: 839 EAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRL 898
E+ IRK+LK CA +R G W +K F +PSE ++R + PE C+Y SM A RL
Sbjct: 889 ESSIRKRLKLCADFKRTGMDSNFWVIKPEFRLPSEEEIRAMVSPEQCCAYFSMIAAEQRL 948
Query: 899 KHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENI 958
K G + + A + DE + L ++ E+++ PWN + ++ Q
Sbjct: 949 KDAGYGEKFI-----FAQQEDDDEEMQL----KMDDEVKVAPWNTTRAYI----QAMRGK 995
Query: 959 ERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLRRLSME 1018
L++ G DP+G G GFSYVR K + + K+ ++ TVTGTDADLRRLS+
Sbjct: 996 CILQLNGPADPTGCGEGFSYVRMPNKPTQQN----KEETESQPKRTVTGTDADLRRLSLN 1051
Query: 1019 AAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------VQLQQQ 1063
A+ +L KF VPEE I K +RW I ++R LS+E+A +G + Q++
Sbjct: 1052 NAKALLRKFQVPEEEIKKLSRWEVIDVVRTLSTEKAKAGEEGMDKFSRGNRFSIAEHQER 1111
Query: 1064 TRGKCQEIWDRQVQSLSAAD----DDEIGSDSEHSDLDSFAGDLENLL 1107
+ +CQ I+D Q + L++++ D+ + SE SDL+ +LEN+L
Sbjct: 1112 YKEECQRIFDLQNRVLASSEVLSTDEGESTASEESDLEELGKNLENML 1159
Score = 47.0 bits (110), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 28/36 (77%)
Query: 27 GGNRLLGFMFGNVDYAGDLDVDYLDEDAKEHLAAVA 62
GG L GF+FGNVD G LD D+LDE+AK+ L++++
Sbjct: 12 GGLNLAGFLFGNVDENGHLDGDFLDEEAKQQLSSLS 47
>gi|390178666|ref|XP_001359228.3| GA14575, isoform C [Drosophila pseudoobscura pseudoobscura]
gi|388859539|gb|EAL28373.3| GA14575, isoform C [Drosophila pseudoobscura pseudoobscura]
Length = 2204
Score = 248 bits (634), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 151/445 (33%), Positives = 233/445 (52%), Gaps = 44/445 (9%)
Query: 654 FKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCL 713
+ DLS KDG + L E+CEE P L++ GM + + YY++ + D G
Sbjct: 732 MRNPEDLSGKDGDIVLAEFCEEHPPLMNQVGMCSKIKNYYKRKAEKDSGPQDYVYGEVAF 791
Query: 714 GNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRR 773
+ SPFLG + G +LE NMYRAP++ HK+A DFL++R+ + IR
Sbjct: 792 AHT--------SPFLGILHPGQCIQALENNMYRAPIYPHKMAPNDFLIIRT-RNNYWIRA 842
Query: 774 IDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQ 833
+ + V Q+ PL EV P SK ++ + + V +YR F + R I +D++
Sbjct: 843 VTAIFTVGQECPLYEVPGPNSKRANNFTRDFLQVFIYRLFWKS--RDQPRRIRMDDIKRA 900
Query: 834 FPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQA 893
FP SE+ IRK+LK+CA +R G W +K F +PSE ++R + PE C+Y SM A
Sbjct: 901 FPAHSESSIRKRLKQCADFKRTGMDSNWWVIKPEFRLPSEEEIRAMVSPEQCCAYFSMIA 960
Query: 894 GLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQ 953
RLK G + L A P E A ++ E+++ PWN + ++ Q
Sbjct: 961 AEQRLKDAGYGEKFLFA---------PQEDDDEEAQLKLDDEVKVAPWNTTRAYI----Q 1007
Query: 954 DRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLR 1013
L+++G DP+G G GFSYVR K + + K+ ++ +VTGTDADLR
Sbjct: 1008 AMRGKCLLQLSGPADPTGCGEGFSYVRVPNKPTQT-----KEEQESQPKRSVTGTDADLR 1062
Query: 1014 RLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------V 1058
RL ++ A+E+L KF VPEE I K +RW I ++R LS+E+A +G
Sbjct: 1063 RLPLQRAKELLRKFKVPEEEIKKLSRWEVIDVVRTLSTEKAKAGEEGMDKFSRGNRFSIA 1122
Query: 1059 QLQQQTRGKCQEIWDRQVQSLSAAD 1083
+ Q++ + +CQ I+D Q + L++++
Sbjct: 1123 EHQERYKEECQRIFDLQNRVLASSE 1147
>gi|24020890|gb|AAN40843.1| TBP-associated factor RNA polymerase 1-like [Pongo pygmaeus]
Length = 931
Score = 248 bits (634), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 169/484 (34%), Positives = 248/484 (51%), Gaps = 56/484 (11%)
Query: 659 DLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLT 718
DL+ KDG + L EY EE L+ GM + YY K PG GA C G +
Sbjct: 203 DLTGKDGDLILAEYSEENGPLMMQVGMATKIKNYY-KRKPGKDPGAPDCK----YGETVY 257
Query: 719 LEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRRIDKVA 778
SPFLG + G +LE N++RAP++ HK+ TDFL++R+ +G IR + +
Sbjct: 258 CH---TSPFLGSLHPGQLLQALENNLFRAPMYLHKMPETDFLIIRTRQG-YYIRELVDIF 313
Query: 779 VVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLS 838
VV QQ PL EV P S+ + + + V +YR F + R I ++++ FP+ S
Sbjct: 314 VVGQQCPLFEVPGPNSRRANMHIRDFLEVFIYRLFWKSKDRPRR--IRMEDIKKAFPSHS 371
Query: 839 EAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRL 898
E+ IRK+LK CA +R G W +K F +P+E ++R PE C+Y SM A RL
Sbjct: 372 ESSIRKRLKLCADFKRTGMDSNWWVLKSDFRLPTEEEIRAKVSPEQCCAYYSMIAAKQRL 431
Query: 899 KHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENI 958
K G + + A P+E I+ E+ PWN + F+A +
Sbjct: 432 KDAGYGEKSFFA---------PEED-EEDFQMKIDDEVHTAPWNTTRAFIAAM----KGK 477
Query: 959 ERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLRRLSME 1018
LE+TGV DP+G G GFSYV+ K + +K + TVTGTDADLRRLS++
Sbjct: 478 CLLEVTGVADPTGCGEGFSYVKIPNKPTK-----QKDDKELQAVKTVTGTDADLRRLSLK 532
Query: 1019 AAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------VQLQQQ 1063
A+++L KF VPEE I K +RW I ++R +S+EQA SG + Q++
Sbjct: 533 NAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSKFARGSRFSVAEHQER 592
Query: 1064 TRGKCQEIWDRQVQSLSAAD---DDEIGSDSEHSDLDSFAGDLENLLD--------AEEF 1112
+ +CQ I+D Q + LS+ + D S +E SD + ++EN+L + E+
Sbjct: 593 YKEECQRIFDLQNKVLSSTEVLSTDTDSSSAEDSDFEEMGKNIENMLQNKKTSSQLSREW 652
Query: 1113 EEEE 1116
EE+E
Sbjct: 653 EEQE 656
>gi|195152117|ref|XP_002016983.1| GL21765 [Drosophila persimilis]
gi|194112040|gb|EDW34083.1| GL21765 [Drosophila persimilis]
Length = 2137
Score = 248 bits (634), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 151/445 (33%), Positives = 233/445 (52%), Gaps = 44/445 (9%)
Query: 654 FKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCL 713
+ DLS KDG + L E+CEE P L++ GM + + YY++ + D G
Sbjct: 732 MRNPEDLSGKDGDIVLAEFCEEHPPLMNQVGMCSKIKNYYKRKAEKDSGPQDYVYGEVAF 791
Query: 714 GNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRR 773
+ SPFLG + G +LE NMYRAP++ HK+A DFL++R+ + IR
Sbjct: 792 AHT--------SPFLGILHPGQCIQALENNMYRAPIYPHKMAPNDFLIIRT-RNNYWIRA 842
Query: 774 IDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQ 833
+ + V Q+ PL EV P SK ++ + + V +YR F + R I +D++
Sbjct: 843 VTAIFTVGQECPLYEVPGPNSKRANNFTRDFLQVFIYRLFWKS--RDQPRRIRMDDIKRA 900
Query: 834 FPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQA 893
FP SE+ IRK+LK+CA +R G W +K F +PSE ++R + PE C+Y SM A
Sbjct: 901 FPAHSESSIRKRLKQCADFKRTGMDSNWWVIKPEFRLPSEEEIRAMVSPEQCCAYFSMIA 960
Query: 894 GLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQ 953
RLK G + L A P E A ++ E+++ PWN + ++ Q
Sbjct: 961 AEQRLKDAGYGEKFLFA---------PQEDDDEEAQLKLDDEVKVAPWNTTRAYI----Q 1007
Query: 954 DRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLR 1013
L+++G DP+G G GFSYVR K + + K+ ++ +VTGTDADLR
Sbjct: 1008 AMRGKCLLQLSGPADPTGCGEGFSYVRVPNKPTQT-----KEEQESQPKRSVTGTDADLR 1062
Query: 1014 RLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------V 1058
RL ++ A+E+L KF VPEE I K +RW I ++R LS+E+A +G
Sbjct: 1063 RLPLQRAKELLRKFKVPEEEIKKLSRWEVIDVVRTLSTEKAKAGEEGMDKFSRGNRFSIA 1122
Query: 1059 QLQQQTRGKCQEIWDRQVQSLSAAD 1083
+ Q++ + +CQ I+D Q + L++++
Sbjct: 1123 EHQERYKEECQRIFDLQNRVLASSE 1147
>gi|383853231|ref|XP_003702126.1| PREDICTED: transcription initiation factor TFIID subunit 1-like
[Megachile rotundata]
Length = 1921
Score = 248 bits (633), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 160/478 (33%), Positives = 252/478 (52%), Gaps = 49/478 (10%)
Query: 621 PNSLIHLIRTKIHLLPRAQKLPGENKSLRPPGAF--KKKSDLSVKDGHVFLMEYCEERPL 678
P+S++ LI+ H+ +A++ E + F + DL+ KDG + L+E+ EE P
Sbjct: 664 PHSVLPLIK---HIKKKAKQREQERIASGGGDVFFMRTAEDLTGKDGELVLVEFSEEHPP 720
Query: 679 LLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLTLEPGDKSPFLGDIKAGCSQS 738
L++ GM + + YY++ + DQ G + SPFLG + G S
Sbjct: 721 LMNQVGMCSKVKNYYKRKAGKDQGPQKYKYGETAYAHT--------SPFLGILTPGQSIQ 772
Query: 739 SLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRRIDKVAVVAQQEPLMEVMSPGSKNLQ 798
++E NMYRAP++ HK+ TDFL++R+ + + IR +D + V Q+ PL EV P SK
Sbjct: 773 AVENNMYRAPIYEHKIPETDFLIIRT-RQQYYIREVDAIFVAGQECPLYEVPGPNSKRAN 831
Query: 799 TYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLSEAIIRKKLKECAFLRRDGNG 858
+ + + V +YR F + + I +D++ FP+ SE+ IRK+LK CA +R G
Sbjct: 832 NFVRDFLQVFIYRLFWKS--KDTPRRIRMDDIKKAFPSHSESSIRKRLKLCADFKRTGMD 889
Query: 859 KQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRLKHLGITQLTLPASISSAMSQ 918
W +K F +P+E ++R + PE C+Y SM A RLK G + L
Sbjct: 890 SNWWVIKPDFRLPTEEEIRAMVSPEQCCAYFSMIAAEQRLKDAGYGEKFLFTPQDDD--- 946
Query: 919 LPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSY 978
DE + L ++ E+++ PWN + ++ Q + L++ G DP+G G GFSY
Sbjct: 947 --DEEMQLK----MDDEVKVAPWNTTRAYI----QAMKGKCLLQLAGPADPTGCGEGFSY 996
Query: 979 VRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLRRLSMEAAREVLLKFNVPEEMIAKQT 1038
VR K ++S +++A R TVTGTDADLRRLS+ A+ +L KF VPEE I K +
Sbjct: 997 VRVPNKPTISKE--EQEAQPKR---TVTGTDADLRRLSLNNAKALLRKFGVPEEEIKKLS 1051
Query: 1039 RWHRIAMIRKLSSEQAASG---------------VQLQQQTRGKCQEIWDRQVQSLSA 1081
RW I ++R LS+E+A +G + Q++ + +CQ I+D Q + LS+
Sbjct: 1052 RWEVIDVVRTLSTEKAKAGEEGMTKFSRGNRFSIAEHQERYKEECQRIFDLQNRVLSS 1109
Score = 46.6 bits (109), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 18 DEEEYEDVSGGNRLLGFMFGNVDYAGDLDVDYLDEDAKEHLAAVADKLGPS 68
+EE +D+ G + GF+FGN+D G L+ D LD +AK+HLA++ ++LG S
Sbjct: 5 EEENDKDIMSGINMTGFLFGNIDDNGQLEDDILDPEAKQHLASL-NRLGLS 54
>gi|347970832|ref|XP_003436646.1| AGAP003882-PB [Anopheles gambiae str. PEST]
gi|333466394|gb|EGK96225.1| AGAP003882-PB [Anopheles gambiae str. PEST]
Length = 2159
Score = 248 bits (632), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 155/468 (33%), Positives = 244/468 (52%), Gaps = 47/468 (10%)
Query: 659 DLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLT 718
DL+ +DG + L+E+CEE P L++ GM + + +Y++ D G +
Sbjct: 720 DLTGRDGELILIEFCEEHPPLMNQVGMASKIKNFYKRKMGKDPGPPEFRFGETHYAHT-- 777
Query: 719 LEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRRIDKVA 778
SPFLG + G ++E NMYRAP++ H + TDFL++R+ + +R +D +
Sbjct: 778 ------SPFLGILHHGQCIQAIENNMYRAPIYPHTIQETDFLVIRT-RNNYFVREMDALF 830
Query: 779 VVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLS 838
Q+ PL EV P SK + + + V +YR F + R I +D++ FP S
Sbjct: 831 TAGQECPLYEVPGPNSKRANNFVRDFLQVFIYRLFWKS--RDNPRKIRMDDIKKAFPAHS 888
Query: 839 EAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRL 898
E+ IRK+LK CA +R G W +K F +PSE ++R + PE C+Y SM A RL
Sbjct: 889 ESSIRKRLKLCADFKRTGMDSNFWVIKPEFRLPSEEEIRAMVSPEQCCAYFSMIAAEQRL 948
Query: 899 KHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENI 958
K G + + A + DE + L ++ E+++ PWN + ++ Q
Sbjct: 949 KDAGYGEKFI-----FAQQEDDDEEMQL----KMDDEVKVAPWNTTRAYI----QAMRGK 995
Query: 959 ERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLRRLSME 1018
L++ G DP+G G GFSYVR K + + K+ ++ TVTGTDADLRRLS+
Sbjct: 996 CILQLNGPADPTGCGEGFSYVRMPNKPTQQN----KEETESQPKRTVTGTDADLRRLSLN 1051
Query: 1019 AAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------VQLQQQ 1063
A+ +L KF VPEE I K +RW I ++R LS+E+A +G + Q++
Sbjct: 1052 NAKALLRKFQVPEEEIKKLSRWEVIDVVRTLSTEKAKAGEEGMDKFSRGNRFSIAEHQER 1111
Query: 1064 TRGKCQEIWDRQVQSLSAAD----DDEIGSDSEHSDLDSFAGDLENLL 1107
+ +CQ I+D Q + L++++ D+ + SE SDL+ +LEN+L
Sbjct: 1112 YKEECQRIFDLQNRVLASSEVLSTDEGESTASEESDLEELGKNLENML 1159
Score = 47.0 bits (110), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 28/36 (77%)
Query: 27 GGNRLLGFMFGNVDYAGDLDVDYLDEDAKEHLAAVA 62
GG L GF+FGNVD G LD D+LDE+AK+ L++++
Sbjct: 12 GGLNLAGFLFGNVDENGHLDGDFLDEEAKQQLSSLS 47
>gi|195344027|ref|XP_002038592.1| GM10907 [Drosophila sechellia]
gi|194133613|gb|EDW55129.1| GM10907 [Drosophila sechellia]
Length = 2131
Score = 248 bits (632), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 148/445 (33%), Positives = 234/445 (52%), Gaps = 44/445 (9%)
Query: 654 FKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCL 713
+ DLS +DG + L E+CEE P L++ GM + + YY++ + D G
Sbjct: 712 MRNPEDLSGRDGDIVLAEFCEEHPPLINQVGMCSKIKNYYKRKAEKDSGPQDFVYGEVAF 771
Query: 714 GNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRR 773
+ SPFLG + G ++E NMYRAP++ HK+A DFL++R+ + IR
Sbjct: 772 AHT--------SPFLGILHPGQCIQAIENNMYRAPIYPHKMAHNDFLVIRT-RNNYWIRS 822
Query: 774 IDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQ 833
++ + V Q+ PL EV P SK ++ + + V +YR F + R I +D++
Sbjct: 823 VNSIYTVGQECPLYEVPGPNSKRANNFTRDFLQVFIYRLFWKS--RDNPRRIRMDDIKQA 880
Query: 834 FPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQA 893
FP SE+ IRK+LK+CA +R G W +K F +PSE ++R + PE C+Y SM A
Sbjct: 881 FPAHSESSIRKRLKQCADFKRTGMDSNWWVIKPEFRLPSEEEIRAMVSPEQCCAYFSMIA 940
Query: 894 GLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQ 953
RLK G + L A P E A ++ E+++ PWN + ++ Q
Sbjct: 941 AEQRLKDAGYGEKFLFA---------PQEDDDEEAQLKLDDEVKVAPWNTTRAYI----Q 987
Query: 954 DRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLR 1013
L+++G DP+G G GFSYVR K + + K+ ++ +VTGTDADLR
Sbjct: 988 AMRGKCLLQLSGPADPTGCGEGFSYVRVPNKPTQT-----KEEQESQPKRSVTGTDADLR 1042
Query: 1014 RLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------V 1058
RL ++ A+E+L +F VPEE I K +RW I ++R LS+E+A +G
Sbjct: 1043 RLPLQRAKELLRQFKVPEEEIKKLSRWEVIDVVRTLSTEKAKAGEEGMDKFSRGNRFSIA 1102
Query: 1059 QLQQQTRGKCQEIWDRQVQSLSAAD 1083
+ Q++ + +CQ I+D Q + L++++
Sbjct: 1103 EHQERYKEECQRIFDLQNRVLASSE 1127
>gi|345493472|ref|XP_003427081.1| PREDICTED: LOW QUALITY PROTEIN: transcription initiation factor TFIID
subunit 1-like [Nasonia vitripennis]
Length = 1950
Score = 247 bits (631), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 172/532 (32%), Positives = 267/532 (50%), Gaps = 85/532 (15%)
Query: 659 DLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLT 718
DL+ +DG + L+E+ EE P L++ GM + + YY++ + D G +
Sbjct: 675 DLTGRDGELVLIEFSEEHPPLINQVGMCSKIKNYYKRKAGKDTGPPNFKYGETAYAHT-- 732
Query: 719 LEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRRIDKVA 778
SPFLG + G + ++E NMYRAP++ H+V TDFL++RS + + IR ID +
Sbjct: 733 ------SPFLGVLTPGQTIQAVENNMYRAPIYEHQVPQTDFLIIRS-RQQYYIREIDALF 785
Query: 779 VVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREF--SAAAKRGLLPCIGVDELSVQFPN 836
V Q+ PL EV P SK + + + V +YR F S R I +D++ FP+
Sbjct: 786 VAGQECPLYEVPGPNSKRANNFVRDFLQVFIYRLFWKSPDTPRR----IKMDDIKKAFPS 841
Query: 837 LSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLY 896
SE+ IRK+LK CA +R G W +K F +P+E ++R + PE C+Y SM A
Sbjct: 842 HSESSIRKRLKLCADFKRTGMDSNWWVIKPDFRLPTEEEIRAMVSPEQCCAYFSMIAAEQ 901
Query: 897 RLKHLGITQ--LTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQD 954
RLK G + L +P DE I L ++ E+++ PWN + ++ Q
Sbjct: 902 RLKDAGYGEKFLFMPQDDD-------DEEIQLK----MDDEVKVAPWNTTRAYI----QA 946
Query: 955 RENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLRR 1014
+ L++ G DP+G GFSYVR K ++S +++A R TVTGTDADLRR
Sbjct: 947 MKGKCLLQLAGPADPTGCNEGFSYVRVPNKPTISKE--EQEAQPKR---TVTGTDADLRR 1001
Query: 1015 LSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------VQ 1059
LS+ A+ +L KF VPEE I K +RW I ++R LS+E+A +G +
Sbjct: 1002 LSLNNAKALLRKFGVPEEDIKKLSRWEVIDVVRTLSTEKAKAGEEGMTKFSRGNRFSIAE 1061
Query: 1060 LQQQTRGKCQEIWDRQVQSLSA----ADDDEIGSDSEHSDLDSFAGDLENLLDAEEFEEE 1115
Q++ + +CQ I+D Q + LS+ + D+ S + SD++ ++EN+L
Sbjct: 1062 HQERYKEECQRIFDIQNRVLSSHEVLSTDEGESSVEDSSDIEEMGKNIENML-------- 1113
Query: 1116 ESNYDTKHDKVEGVKGLKMRRRPIQVQAEEEIEDEAAEAAELCRLLMDDDEA 1167
SN T A+ +E E + EL ++LM+D +
Sbjct: 1114 -SNKKT--------------------SAQLSLEKEEQQRHELKKMLMNDTQG 1144
Score = 56.6 bits (135), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 112/268 (41%), Gaps = 54/268 (20%)
Query: 15 DEDDEEEYEDVSGGNRLLGFMFGNVDYAGDLDVDYLDEDAKEHLAAVADKLGPSLTDIDV 74
DED+E EYE L GFMFGN+D G L+ D LD +AKEHL+
Sbjct: 5 DEDNEREYESEMN---LAGFMFGNIDENGQLEDDILDSNAKEHLS--------------- 46
Query: 75 WNSQSCFQLFCSYCLLSVNSPQPPVDAVEQDYDKKAEDAVDYEDIDE-QYEGPEIQIASE 133
S + L L + + DAVE+ K E+ V+ E +++ E EI+ ++
Sbjct: 47 ----SLYHLGLGSLLQEMIAQ----DAVEEKDSKDQENGVNKEQVEKLPVENGEIEKDTK 98
Query: 134 EDYLLPKKEYFAAEVSLAALKPTASPFDDENYDEDEELEKEHEEVDKETEDTTTILSGEQ 193
EDY +V P A F D N EL ++ E K+T+D + S ++
Sbjct: 99 EDY----------DVDYVVKDPNALDFSDIN-----ELAEDSVEEVKDTQDKQQVKSEKE 143
Query: 194 VECATAVPDGEKSPEGD--------PQVGSLGAEEEMTAGVKDYDEELADILKGPL-DGQ 244
D E P+ + + +L EE A + + LA +L +
Sbjct: 144 TGYDADDEDVENKPDAELMPPPPVPEEKEALTPEEVEAAAKRKLETPLASMLPSKYANVN 203
Query: 245 VSTPLPVLCVEDGKVILRFSEIFGIHEP 272
V+ P +LRFS++FG +P
Sbjct: 204 VTELFPDFRPNK---VLRFSKLFGPGKP 228
>gi|28603668|gb|AAO47866.1| RE74933p [Drosophila melanogaster]
Length = 2096
Score = 247 bits (631), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 148/445 (33%), Positives = 234/445 (52%), Gaps = 44/445 (9%)
Query: 654 FKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCL 713
+ DLS +DG + L E+CEE P L++ GM + + YY++ + D G
Sbjct: 710 MRNPEDLSGRDGDIVLAEFCEEHPPLINQVGMCSKIKNYYKRKAEKDSGPQDFVYGEVAF 769
Query: 714 GNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRR 773
+ SPFLG + G ++E NMYRAP++ HK+A DFL++R+ + IR
Sbjct: 770 AHT--------SPFLGILHPGQCIQAIENNMYRAPIYPHKMAHNDFLVIRT-RNNYWIRS 820
Query: 774 IDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQ 833
++ + V Q+ PL EV P SK ++ + + V +YR F + R I +D++
Sbjct: 821 VNSIYTVGQECPLYEVPGPNSKRANNFTRDFLQVFIYRLFWKS--RDNPRRIRMDDIKQA 878
Query: 834 FPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQA 893
FP SE+ IRK+LK+CA +R G W +K F +PSE ++R + PE C+Y SM A
Sbjct: 879 FPAHSESSIRKRLKQCADFKRTGMDSNWWVIKPEFRLPSEEEIRAMVSPEQCCAYFSMIA 938
Query: 894 GLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQ 953
RLK G + L A P E A ++ E+++ PWN + ++ Q
Sbjct: 939 AEQRLKDAGYGEKFLFA---------PQEDDDEEAQLKLDDEVKVAPWNTTRAYI----Q 985
Query: 954 DRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLR 1013
L+++G DP+G G GFSYVR K + + K+ ++ +VTGTDADLR
Sbjct: 986 AMRGKCLLQLSGPADPTGCGEGFSYVRVPNKPTQT-----KEEQESQPKRSVTGTDADLR 1040
Query: 1014 RLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------V 1058
RL ++ A+E+L +F VPEE I K +RW I ++R LS+E+A +G
Sbjct: 1041 RLPLQRAKELLRQFKVPEEEIKKLSRWEVIDVVRTLSTEKAKAGEEGIDKFSRGNRFSIA 1100
Query: 1059 QLQQQTRGKCQEIWDRQVQSLSAAD 1083
+ Q++ + +CQ I+D Q + L++++
Sbjct: 1101 EHQERYKEECQRIFDLQNRVLASSE 1125
>gi|28571540|ref|NP_476956.3| TBP-associated factor 1, isoform A [Drosophila melanogaster]
gi|4389445|gb|AAD19815.1| transcription factor [Drosophila melanogaster]
gi|28381166|gb|AAF54102.3| TBP-associated factor 1, isoform A [Drosophila melanogaster]
Length = 2065
Score = 247 bits (630), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 148/445 (33%), Positives = 234/445 (52%), Gaps = 44/445 (9%)
Query: 654 FKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCL 713
+ DLS +DG + L E+CEE P L++ GM + + YY++ + D G
Sbjct: 710 MRNPEDLSGRDGDIVLAEFCEEHPPLINQVGMCSKIKNYYKRKAEKDSGPQDFVYGEVAF 769
Query: 714 GNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRR 773
+ SPFLG + G ++E NMYRAP++ HK+A DFL++R+ + IR
Sbjct: 770 AHT--------SPFLGILHPGQCIQAIENNMYRAPIYPHKMAHNDFLVIRT-RNNYWIRS 820
Query: 774 IDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQ 833
++ + V Q+ PL EV P SK ++ + + V +YR F + R I +D++
Sbjct: 821 VNSIYTVGQECPLYEVPGPNSKRANNFTRDFLQVFIYRLFWKS--RDNPRRIRMDDIKQA 878
Query: 834 FPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQA 893
FP SE+ IRK+LK+CA +R G W +K F +PSE ++R + PE C+Y SM A
Sbjct: 879 FPAHSESSIRKRLKQCADFKRTGMDSNWWVIKPEFRLPSEEEIRAMVSPEQCCAYFSMIA 938
Query: 894 GLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQ 953
RLK G + L A P E A ++ E+++ PWN + ++ Q
Sbjct: 939 AEQRLKDAGYGEKFLFA---------PQEDDDEEAQLKLDDEVKVAPWNTTRAYI----Q 985
Query: 954 DRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLR 1013
L+++G DP+G G GFSYVR K + + K+ ++ +VTGTDADLR
Sbjct: 986 AMRGKCLLQLSGPADPTGCGEGFSYVRVPNKPTQT-----KEEQESQPKRSVTGTDADLR 1040
Query: 1014 RLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------V 1058
RL ++ A+E+L +F VPEE I K +RW I ++R LS+E+A +G
Sbjct: 1041 RLPLQRAKELLRQFKVPEEEIKKLSRWEVIDVVRTLSTEKAKAGEEGMDKFSRGNRFSIA 1100
Query: 1059 QLQQQTRGKCQEIWDRQVQSLSAAD 1083
+ Q++ + +CQ I+D Q + L++++
Sbjct: 1101 EHQERYKEECQRIFDLQNRVLASSE 1125
>gi|45553265|ref|NP_996160.1| TBP-associated factor 1, isoform B [Drosophila melanogaster]
gi|71153181|sp|P51123.3|TAF1_DROME RecName: Full=Transcription initiation factor TFIID subunit 1;
AltName: Full=TAFII250; AltName: Full=TBP-associated
factor 230 kDa; Short=p230; AltName: Full=Transcription
initiation factor TFIID 230 kDa subunit; Short=TAFII-230
gi|45446400|gb|AAS65116.1| TBP-associated factor 1, isoform B [Drosophila melanogaster]
Length = 2129
Score = 247 bits (630), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 148/445 (33%), Positives = 234/445 (52%), Gaps = 44/445 (9%)
Query: 654 FKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCL 713
+ DLS +DG + L E+CEE P L++ GM + + YY++ + D G
Sbjct: 710 MRNPEDLSGRDGDIVLAEFCEEHPPLINQVGMCSKIKNYYKRKAEKDSGPQDFVYGEVAF 769
Query: 714 GNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRR 773
+ SPFLG + G ++E NMYRAP++ HK+A DFL++R+ + IR
Sbjct: 770 AHT--------SPFLGILHPGQCIQAIENNMYRAPIYPHKMAHNDFLVIRT-RNNYWIRS 820
Query: 774 IDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQ 833
++ + V Q+ PL EV P SK ++ + + V +YR F + R I +D++
Sbjct: 821 VNSIYTVGQECPLYEVPGPNSKRANNFTRDFLQVFIYRLFWKS--RDNPRRIRMDDIKQA 878
Query: 834 FPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQA 893
FP SE+ IRK+LK+CA +R G W +K F +PSE ++R + PE C+Y SM A
Sbjct: 879 FPAHSESSIRKRLKQCADFKRTGMDSNWWVIKPEFRLPSEEEIRAMVSPEQCCAYFSMIA 938
Query: 894 GLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQ 953
RLK G + L A P E A ++ E+++ PWN + ++ Q
Sbjct: 939 AEQRLKDAGYGEKFLFA---------PQEDDDEEAQLKLDDEVKVAPWNTTRAYI----Q 985
Query: 954 DRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLR 1013
L+++G DP+G G GFSYVR K + + K+ ++ +VTGTDADLR
Sbjct: 986 AMRGKCLLQLSGPADPTGCGEGFSYVRVPNKPTQT-----KEEQESQPKRSVTGTDADLR 1040
Query: 1014 RLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------V 1058
RL ++ A+E+L +F VPEE I K +RW I ++R LS+E+A +G
Sbjct: 1041 RLPLQRAKELLRQFKVPEEEIKKLSRWEVIDVVRTLSTEKAKAGEEGMDKFSRGNRFSIA 1100
Query: 1059 QLQQQTRGKCQEIWDRQVQSLSAAD 1083
+ Q++ + +CQ I+D Q + L++++
Sbjct: 1101 EHQERYKEECQRIFDLQNRVLASSE 1125
>gi|281361242|ref|NP_001163532.1| TBP-associated factor 1, isoform D [Drosophila melanogaster]
gi|272476838|gb|ACZ94830.1| TBP-associated factor 1, isoform D [Drosophila melanogaster]
Length = 2096
Score = 247 bits (630), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 148/445 (33%), Positives = 234/445 (52%), Gaps = 44/445 (9%)
Query: 654 FKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCL 713
+ DLS +DG + L E+CEE P L++ GM + + YY++ + D G
Sbjct: 710 MRNPEDLSGRDGDIVLAEFCEEHPPLINQVGMCSKIKNYYKRKAEKDSGPQDFVYGEVAF 769
Query: 714 GNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRR 773
+ SPFLG + G ++E NMYRAP++ HK+A DFL++R+ + IR
Sbjct: 770 AHT--------SPFLGILHPGQCIQAIENNMYRAPIYPHKMAHNDFLVIRT-RNNYWIRS 820
Query: 774 IDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQ 833
++ + V Q+ PL EV P SK ++ + + V +YR F + R I +D++
Sbjct: 821 VNSIYTVGQECPLYEVPGPNSKRANNFTRDFLQVFIYRLFWKS--RDNPRRIRMDDIKQA 878
Query: 834 FPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQA 893
FP SE+ IRK+LK+CA +R G W +K F +PSE ++R + PE C+Y SM A
Sbjct: 879 FPAHSESSIRKRLKQCADFKRTGMDSNWWVIKPEFRLPSEEEIRAMVSPEQCCAYFSMIA 938
Query: 894 GLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQ 953
RLK G + L A P E A ++ E+++ PWN + ++ Q
Sbjct: 939 AEQRLKDAGYGEKFLFA---------PQEDDDEEAQLKLDDEVKVAPWNTTRAYI----Q 985
Query: 954 DRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLR 1013
L+++G DP+G G GFSYVR K + + K+ ++ +VTGTDADLR
Sbjct: 986 AMRGKCLLQLSGPADPTGCGEGFSYVRVPNKPTQT-----KEEQESQPKRSVTGTDADLR 1040
Query: 1014 RLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------V 1058
RL ++ A+E+L +F VPEE I K +RW I ++R LS+E+A +G
Sbjct: 1041 RLPLQRAKELLRQFKVPEEEIKKLSRWEVIDVVRTLSTEKAKAGEEGMDKFSRGNRFSIA 1100
Query: 1059 QLQQQTRGKCQEIWDRQVQSLSAAD 1083
+ Q++ + +CQ I+D Q + L++++
Sbjct: 1101 EHQERYKEECQRIFDLQNRVLASSE 1125
>gi|45553263|ref|NP_996159.1| TBP-associated factor 1, isoform C [Drosophila melanogaster]
gi|45446401|gb|AAS65117.1| TBP-associated factor 1, isoform C [Drosophila melanogaster]
Length = 2098
Score = 247 bits (630), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 148/445 (33%), Positives = 234/445 (52%), Gaps = 44/445 (9%)
Query: 654 FKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCL 713
+ DLS +DG + L E+CEE P L++ GM + + YY++ + D G
Sbjct: 710 MRNPEDLSGRDGDIVLAEFCEEHPPLINQVGMCSKIKNYYKRKAEKDSGPQDFVYGEVAF 769
Query: 714 GNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRR 773
+ SPFLG + G ++E NMYRAP++ HK+A DFL++R+ + IR
Sbjct: 770 AHT--------SPFLGILHPGQCIQAIENNMYRAPIYPHKMAHNDFLVIRT-RNNYWIRS 820
Query: 774 IDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQ 833
++ + V Q+ PL EV P SK ++ + + V +YR F + R I +D++
Sbjct: 821 VNSIYTVGQECPLYEVPGPNSKRANNFTRDFLQVFIYRLFWKS--RDNPRRIRMDDIKQA 878
Query: 834 FPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQA 893
FP SE+ IRK+LK+CA +R G W +K F +PSE ++R + PE C+Y SM A
Sbjct: 879 FPAHSESSIRKRLKQCADFKRTGMDSNWWVIKPEFRLPSEEEIRAMVSPEQCCAYFSMIA 938
Query: 894 GLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQ 953
RLK G + L A P E A ++ E+++ PWN + ++ Q
Sbjct: 939 AEQRLKDAGYGEKFLFA---------PQEDDDEEAQLKLDDEVKVAPWNTTRAYI----Q 985
Query: 954 DRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLR 1013
L+++G DP+G G GFSYVR K + + K+ ++ +VTGTDADLR
Sbjct: 986 AMRGKCLLQLSGPADPTGCGEGFSYVRVPNKPTQT-----KEEQESQPKRSVTGTDADLR 1040
Query: 1014 RLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------V 1058
RL ++ A+E+L +F VPEE I K +RW I ++R LS+E+A +G
Sbjct: 1041 RLPLQRAKELLRQFKVPEEEIKKLSRWEVIDVVRTLSTEKAKAGEEGMDKFSRGNRFSIA 1100
Query: 1059 QLQQQTRGKCQEIWDRQVQSLSAAD 1083
+ Q++ + +CQ I+D Q + L++++
Sbjct: 1101 EHQERYKEECQRIFDLQNRVLASSE 1125
>gi|386765228|ref|NP_001246952.1| TBP-associated factor 1, isoform E [Drosophila melanogaster]
gi|383292532|gb|AFH06271.1| TBP-associated factor 1, isoform E [Drosophila melanogaster]
Length = 2172
Score = 247 bits (630), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 148/445 (33%), Positives = 234/445 (52%), Gaps = 44/445 (9%)
Query: 654 FKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCL 713
+ DLS +DG + L E+CEE P L++ GM + + YY++ + D G
Sbjct: 753 MRNPEDLSGRDGDIVLAEFCEEHPPLINQVGMCSKIKNYYKRKAEKDSGPQDFVYGEVAF 812
Query: 714 GNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRR 773
+ SPFLG + G ++E NMYRAP++ HK+A DFL++R+ + IR
Sbjct: 813 AHT--------SPFLGILHPGQCIQAIENNMYRAPIYPHKMAHNDFLVIRT-RNNYWIRS 863
Query: 774 IDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQ 833
++ + V Q+ PL EV P SK ++ + + V +YR F + R I +D++
Sbjct: 864 VNSIYTVGQECPLYEVPGPNSKRANNFTRDFLQVFIYRLFWKS--RDNPRRIRMDDIKQA 921
Query: 834 FPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQA 893
FP SE+ IRK+LK+CA +R G W +K F +PSE ++R + PE C+Y SM A
Sbjct: 922 FPAHSESSIRKRLKQCADFKRTGMDSNWWVIKPEFRLPSEEEIRAMVSPEQCCAYFSMIA 981
Query: 894 GLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQ 953
RLK G + L A P E A ++ E+++ PWN + ++ Q
Sbjct: 982 AEQRLKDAGYGEKFLFA---------PQEDDDEEAQLKLDDEVKVAPWNTTRAYI----Q 1028
Query: 954 DRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLR 1013
L+++G DP+G G GFSYVR K + + K+ ++ +VTGTDADLR
Sbjct: 1029 AMRGKCLLQLSGPADPTGCGEGFSYVRVPNKPTQT-----KEEQESQPKRSVTGTDADLR 1083
Query: 1014 RLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------V 1058
RL ++ A+E+L +F VPEE I K +RW I ++R LS+E+A +G
Sbjct: 1084 RLPLQRAKELLRQFKVPEEEIKKLSRWEVIDVVRTLSTEKAKAGEEGMDKFSRGNRFSIA 1143
Query: 1059 QLQQQTRGKCQEIWDRQVQSLSAAD 1083
+ Q++ + +CQ I+D Q + L++++
Sbjct: 1144 EHQERYKEECQRIFDLQNRVLASSE 1168
>gi|350408727|ref|XP_003488492.1| PREDICTED: transcription initiation factor TFIID subunit 1-like
isoform 1 [Bombus impatiens]
Length = 1902
Score = 246 bits (629), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 161/481 (33%), Positives = 253/481 (52%), Gaps = 55/481 (11%)
Query: 621 PNSLIHLIRTKIHLLPRAQKLPGENKSLRPPGAF--KKKSDLSVKDGHVFLMEYCEERPL 678
P+S++ LI+ H+ +A++ E + F + DL+ KDG + L+E+ EE P
Sbjct: 641 PHSVLPLIK---HIKKKAKQREQERIASGGGDVFFMRTPEDLTGKDGELVLIEFSEEHPP 697
Query: 679 LLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLTLEPGDKSPFLGDIKAGCSQS 738
L++ GM + + YY++ + DQ G + SPFLG + G S
Sbjct: 698 LMNQVGMCSKVKNYYKRKAGKDQGPQKYKYGETAYAHT--------SPFLGILTPGQSIQ 749
Query: 739 SLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRRIDKVAVVAQQEPLMEVMSPGSKNLQ 798
++E NMYRAP++ HK+ TDFL++R+ + + IR +D + V Q+ PL EV P SK
Sbjct: 750 AVENNMYRAPIYEHKIPETDFLVIRT-RQQYYIREMDALFVAGQECPLYEVPGPNSKRAN 808
Query: 799 TYSINRMLVNVYREF---SAAAKRGLLPCIGVDELSVQFPNLSEAIIRKKLKECAFLRRD 855
+ + + V +YR F + +R I +D++ FP+ SE+ IRK+LK CA +R
Sbjct: 809 NFVRDFLQVFIYRLFWKSNDTPRR-----IKMDDIKRAFPSHSESSIRKRLKLCADFKRT 863
Query: 856 GNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRLKHLGITQLTLPASISSA 915
G W +K F +P+E ++R + PE C+Y SM A RLK G + L
Sbjct: 864 GMDSNWWVIKPDFRLPTEEEIRAMVSPEQCCAYFSMIAAEQRLKDAGYGEKFLFTPQDDD 923
Query: 916 MSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLG 975
DE + L ++ E+++ PWN + ++ Q + L++ G DP+G G G
Sbjct: 924 -----DEEMQLK----MDDEVKVAPWNTTRAYI----QAMKGKCLLQLAGPADPTGCGEG 970
Query: 976 FSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLRRLSMEAAREVLLKFNVPEEMIA 1035
FSYVR K ++S +++A R TVTGTDADLRRLS+ A+ +L KF VPEE I
Sbjct: 971 FSYVRVPNKPTISKE--EQEAQPKR---TVTGTDADLRRLSLNNAKALLRKFGVPEEEIK 1025
Query: 1036 KQTRWHRIAMIRKLSSEQAASG---------------VQLQQQTRGKCQEIWDRQVQSLS 1080
K +RW I ++R LS+E+A +G + Q++ + +CQ I+D Q + LS
Sbjct: 1026 KLSRWEVIDVVRTLSTEKAKAGEEGMTKFSRGNRYSIAEHQERYKEECQRIFDLQNRVLS 1085
Query: 1081 A 1081
+
Sbjct: 1086 S 1086
Score = 47.0 bits (110), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 18 DEEEYEDVSGGNRLLGFMFGNVDYAGDLDVDYLDEDAKEHLAAVADKLGPS 68
+EE +D++ G + GF+FGN+D G L+ D LD +AK+H+A++ ++LG S
Sbjct: 5 EEENDKDITSGINMTGFLFGNIDDNGQLEDDILDPEAKQHIASL-NRLGLS 54
>gi|340716999|ref|XP_003396977.1| PREDICTED: transcription initiation factor TFIID subunit 1-like
isoform 2 [Bombus terrestris]
Length = 1848
Score = 246 bits (629), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 161/481 (33%), Positives = 253/481 (52%), Gaps = 55/481 (11%)
Query: 621 PNSLIHLIRTKIHLLPRAQKLPGENKSLRPPGAF--KKKSDLSVKDGHVFLMEYCEERPL 678
P+S++ LI+ H+ +A++ E + F + DL+ KDG + L+E+ EE P
Sbjct: 641 PHSVLPLIK---HIKKKAKQREQERIASGGGDVFFMRTPEDLTGKDGELVLIEFSEEHPP 697
Query: 679 LLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLTLEPGDKSPFLGDIKAGCSQS 738
L++ GM + + YY++ + DQ G + SPFLG + G S
Sbjct: 698 LMNQVGMCSKVKNYYKRKAGKDQGPQKYKYGETAYAHT--------SPFLGILTPGQSIQ 749
Query: 739 SLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRRIDKVAVVAQQEPLMEVMSPGSKNLQ 798
++E NMYRAP++ HK+ TDFL++R+ + + IR +D + V Q+ PL EV P SK
Sbjct: 750 AVENNMYRAPIYEHKIPETDFLVIRT-RQQYYIREMDALFVAGQECPLYEVPGPNSKRAN 808
Query: 799 TYSINRMLVNVYREF---SAAAKRGLLPCIGVDELSVQFPNLSEAIIRKKLKECAFLRRD 855
+ + + V +YR F + +R I +D++ FP+ SE+ IRK+LK CA +R
Sbjct: 809 NFVRDFLQVFIYRLFWKSNDTPRR-----IKMDDIKKAFPSHSESSIRKRLKLCADFKRT 863
Query: 856 GNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRLKHLGITQLTLPASISSA 915
G W +K F +P+E ++R + PE C+Y SM A RLK G + L
Sbjct: 864 GMDSNWWVIKPDFRLPTEEEIRAMVSPEQCCAYFSMIAAEQRLKDAGYGEKFLFTPQDDD 923
Query: 916 MSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLG 975
DE + L ++ E+++ PWN + ++ Q + L++ G DP+G G G
Sbjct: 924 -----DEEMQLK----MDDEVKVAPWNTTRAYI----QAMKGKCLLQLAGPADPTGCGEG 970
Query: 976 FSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLRRLSMEAAREVLLKFNVPEEMIA 1035
FSYVR K ++S +++A R TVTGTDADLRRLS+ A+ +L KF VPEE I
Sbjct: 971 FSYVRVPNKPTISKE--EQEAQPKR---TVTGTDADLRRLSLNNAKALLRKFGVPEEEIK 1025
Query: 1036 KQTRWHRIAMIRKLSSEQAASG---------------VQLQQQTRGKCQEIWDRQVQSLS 1080
K +RW I ++R LS+E+A +G + Q++ + +CQ I+D Q + LS
Sbjct: 1026 KLSRWEVIDVVRTLSTEKAKAGEEGMTKFSRGNRFSIAEHQERYKEECQRIFDLQNRVLS 1085
Query: 1081 A 1081
+
Sbjct: 1086 S 1086
Score = 47.0 bits (110), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 18 DEEEYEDVSGGNRLLGFMFGNVDYAGDLDVDYLDEDAKEHLAAVADKLGPS 68
+EE +D++ G + GF+FGN+D G L+ D LD +AK+H+A++ ++LG S
Sbjct: 5 EEENDKDITSGINMTGFLFGNIDDNGQLEDDILDPEAKQHIASL-NRLGLS 54
>gi|431914410|gb|ELK15667.1| Transcription initiation factor TFIID subunit 1 [Pteropus alecto]
Length = 1964
Score = 246 bits (629), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 156/437 (35%), Positives = 224/437 (51%), Gaps = 43/437 (9%)
Query: 654 FKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCL 713
+ DL+ KDG + L EY EE L+ GM + YY K PG GA C
Sbjct: 669 MRTPQDLTGKDGDLILAEYSEENGPLMMQVGMATKIKNYY-KRKPGKDPGAPDCK----Y 723
Query: 714 GNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRR 773
G + SPFLG + G + E N++RAP++ HK+ TDFL++R+ +G IR
Sbjct: 724 GETVYCH---TSPFLGSLHPGQLLQAFENNLFRAPIYLHKMPETDFLIIRTRQG-YYIRE 779
Query: 774 IDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQ 833
+ + VV QQ PL EV P SK T+ + + V +YR F + R I ++++
Sbjct: 780 LVDIFVVGQQCPLFEVPGPNSKRANTHIRDFLQVFIYRLFWKSLDRPRR--IRMEDIKKA 837
Query: 834 FPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQA 893
FP+ SE+ IRK+LK CA +R G W +K F +P+E ++R + PE C+Y SM A
Sbjct: 838 FPSHSESSIRKRLKLCADFKRTGMDSNWWVLKSDFRLPTEEEIRAMVSPEQCCAYYSMIA 897
Query: 894 GLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQ 953
RLK G + + A P+E I+ E++ PWN + F+A
Sbjct: 898 AEQRLKDAGYGEKSFFA---------PEEENEEDFQMKIDDEVRTAPWNTTRAFIAAM-- 946
Query: 954 DRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLR 1013
+ LE+TGV DP+G G GFSYV+ K + K TVTGTDADLR
Sbjct: 947 --KGKCLLEVTGVADPTGCGEGFSYVKIPNKPTQQ----KDDKEPQPVKKTVTGTDADLR 1000
Query: 1014 RLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------V 1058
RLS++ A+++L KF VPEE I K +RW I ++R +S+EQA SG
Sbjct: 1001 RLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSKFARGSRFSVA 1060
Query: 1059 QLQQQTRGKCQEIWDRQ 1075
+ Q++ + +CQ I+D Q
Sbjct: 1061 EHQERYKEECQRIFDLQ 1077
>gi|350408730|ref|XP_003488493.1| PREDICTED: transcription initiation factor TFIID subunit 1-like
isoform 2 [Bombus impatiens]
Length = 1848
Score = 246 bits (629), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 161/481 (33%), Positives = 253/481 (52%), Gaps = 55/481 (11%)
Query: 621 PNSLIHLIRTKIHLLPRAQKLPGENKSLRPPGAF--KKKSDLSVKDGHVFLMEYCEERPL 678
P+S++ LI+ H+ +A++ E + F + DL+ KDG + L+E+ EE P
Sbjct: 641 PHSVLPLIK---HIKKKAKQREQERIASGGGDVFFMRTPEDLTGKDGELVLIEFSEEHPP 697
Query: 679 LLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLTLEPGDKSPFLGDIKAGCSQS 738
L++ GM + + YY++ + DQ G + SPFLG + G S
Sbjct: 698 LMNQVGMCSKVKNYYKRKAGKDQGPQKYKYGETAYAHT--------SPFLGILTPGQSIQ 749
Query: 739 SLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRRIDKVAVVAQQEPLMEVMSPGSKNLQ 798
++E NMYRAP++ HK+ TDFL++R+ + + IR +D + V Q+ PL EV P SK
Sbjct: 750 AVENNMYRAPIYEHKIPETDFLVIRT-RQQYYIREMDALFVAGQECPLYEVPGPNSKRAN 808
Query: 799 TYSINRMLVNVYREF---SAAAKRGLLPCIGVDELSVQFPNLSEAIIRKKLKECAFLRRD 855
+ + + V +YR F + +R I +D++ FP+ SE+ IRK+LK CA +R
Sbjct: 809 NFVRDFLQVFIYRLFWKSNDTPRR-----IKMDDIKRAFPSHSESSIRKRLKLCADFKRT 863
Query: 856 GNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRLKHLGITQLTLPASISSA 915
G W +K F +P+E ++R + PE C+Y SM A RLK G + L
Sbjct: 864 GMDSNWWVIKPDFRLPTEEEIRAMVSPEQCCAYFSMIAAEQRLKDAGYGEKFLFTPQDDD 923
Query: 916 MSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLG 975
DE + L ++ E+++ PWN + ++ Q + L++ G DP+G G G
Sbjct: 924 -----DEEMQLK----MDDEVKVAPWNTTRAYI----QAMKGKCLLQLAGPADPTGCGEG 970
Query: 976 FSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLRRLSMEAAREVLLKFNVPEEMIA 1035
FSYVR K ++S +++A R TVTGTDADLRRLS+ A+ +L KF VPEE I
Sbjct: 971 FSYVRVPNKPTISKE--EQEAQPKR---TVTGTDADLRRLSLNNAKALLRKFGVPEEEIK 1025
Query: 1036 KQTRWHRIAMIRKLSSEQAASG---------------VQLQQQTRGKCQEIWDRQVQSLS 1080
K +RW I ++R LS+E+A +G + Q++ + +CQ I+D Q + LS
Sbjct: 1026 KLSRWEVIDVVRTLSTEKAKAGEEGMTKFSRGNRYSIAEHQERYKEECQRIFDLQNRVLS 1085
Query: 1081 A 1081
+
Sbjct: 1086 S 1086
Score = 47.0 bits (110), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 18 DEEEYEDVSGGNRLLGFMFGNVDYAGDLDVDYLDEDAKEHLAAVADKLGPS 68
+EE +D++ G + GF+FGN+D G L+ D LD +AK+H+A++ ++LG S
Sbjct: 5 EEENDKDITSGINMTGFLFGNIDDNGQLEDDILDPEAKQHIASL-NRLGLS 54
>gi|307198839|gb|EFN79615.1| Transcription initiation factor TFIID subunit 1 [Harpegnathos
saltator]
Length = 1919
Score = 246 bits (629), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 151/438 (34%), Positives = 234/438 (53%), Gaps = 44/438 (10%)
Query: 659 DLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLT 718
DL+ +DG + L+E+ EE P L++ GM + + YY++ + DQ G +
Sbjct: 685 DLTGRDGELVLIEFSEEHPPLMNQVGMCSKVKNYYKRRAGKDQGPQTYKYGETAYAHT-- 742
Query: 719 LEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRRIDKVA 778
SPFLG + G S ++E NMYRAP++ HK+ TDFL++R+ + + IR +D +
Sbjct: 743 ------SPFLGILTPGQSIQAVENNMYRAPIYEHKIPETDFLVIRT-RQQYYIREVDALF 795
Query: 779 VVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLS 838
V Q+ PL EV P SK + + + V +YR F + R I +D++ FP+ S
Sbjct: 796 VAGQECPLYEVPGPNSKRANNFVRDFLQVFIYRLFWKS--RDTPRRIKMDDIKKAFPSHS 853
Query: 839 EAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRL 898
E+ IRK+LK CA +R G W +K F +P+E ++R + PE C+Y SM A RL
Sbjct: 854 ESSIRKRLKLCADFKRTGMDSNWWVIKPDFRLPTEEEIRAMVSPEQCCAYFSMIAAEQRL 913
Query: 899 KHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENI 958
K G + L DE + L ++ E+++ PWN + ++ Q +
Sbjct: 914 KDAGYGEKFLFTPQDDD-----DEEMQLK----MDDEVKVAPWNTTRAYI----QAMKGK 960
Query: 959 ERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLRRLSME 1018
L++ G DP+G G GFSYVR K ++S +++A R TVTGTDADLRRLS+
Sbjct: 961 CLLQLAGPADPTGCGEGFSYVRVPNKPTISKE--EQEAQPKR---TVTGTDADLRRLSLN 1015
Query: 1019 AAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------VQLQQQ 1063
A+ +L KF VPE+ I K +RW I ++R LS+E+A +G + Q++
Sbjct: 1016 NAKALLRKFGVPEDEIKKLSRWEVIDVVRTLSTEKAKAGEEGMTKFSRGNRFSIAEHQER 1075
Query: 1064 TRGKCQEIWDRQVQSLSA 1081
+ +CQ I+D Q + LS+
Sbjct: 1076 YKEECQRIFDLQNRVLSS 1093
Score = 44.3 bits (103), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 37/53 (69%), Gaps = 2/53 (3%)
Query: 17 DDEEEYE-DVSGGNRLLGFMFGNVDYAGDLDVDYLDEDAKEHLAAVADKLGPS 68
D EEE E D++ G + GF+FGN+D G L+ D LD +AK+ LA+++ +LG S
Sbjct: 3 DSEEENEKDLASGLNITGFLFGNIDDNGQLEDDILDPEAKQQLASLS-RLGLS 54
>gi|85857444|gb|ABC86258.1| RE63802p [Drosophila melanogaster]
Length = 1964
Score = 246 bits (629), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 148/445 (33%), Positives = 234/445 (52%), Gaps = 44/445 (9%)
Query: 654 FKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCL 713
+ DLS +DG + L E+CEE P L++ GM + + YY++ + D G
Sbjct: 710 MRNPEDLSGRDGDIVLAEFCEEHPPLINQVGMCSKIKNYYKRKAEKDSGPQDFVYGEVAF 769
Query: 714 GNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRR 773
+ SPFLG + G ++E NMYRAP++ HK+A DFL++R+ + IR
Sbjct: 770 AHT--------SPFLGILHPGQCIQAIENNMYRAPIYPHKMAHNDFLVIRT-RNNYWIRS 820
Query: 774 IDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQ 833
++ + V Q+ PL EV P SK ++ + + V +YR F + R I +D++
Sbjct: 821 VNSIYTVGQECPLYEVPGPNSKRANNFTRDFLQVFIYRLFWKS--RDNPRHIRMDDIKQA 878
Query: 834 FPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQA 893
FP SE+ IRK+LK+CA +R G W +K F +PSE ++R + PE C+Y SM A
Sbjct: 879 FPAHSESSIRKRLKQCADFKRTGMDSNWWVIKPEFRLPSEEEIRAMVSPEQCCAYFSMIA 938
Query: 894 GLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQ 953
RLK G + L A P E A ++ E+++ PWN + ++ Q
Sbjct: 939 AGQRLKDAGYGEKFLFA---------PQEDDDEEAQLKLDDEVKVAPWNTTRAYI----Q 985
Query: 954 DRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLR 1013
L+++G DP+G G GFSYVR K + + K+ ++ +VTGTDADLR
Sbjct: 986 AMRGKCLLQLSGPADPTGCGEGFSYVRVPNKPTQT-----KEEQESQPKRSVTGTDADLR 1040
Query: 1014 RLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------V 1058
RL ++ A+E+L +F VPEE I K +RW I ++R LS+E+A +G
Sbjct: 1041 RLPLQRAKELLRQFKVPEEEIKKLSRWEVIDVVRTLSTEKAKAGEEGMDKFSRGNRFSIA 1100
Query: 1059 QLQQQTRGKCQEIWDRQVQSLSAAD 1083
+ Q++ + +CQ I+D Q + L++++
Sbjct: 1101 EHQERYKEECQRIFDLQNRVLASSE 1125
>gi|340716997|ref|XP_003396976.1| PREDICTED: transcription initiation factor TFIID subunit 1-like
isoform 1 [Bombus terrestris]
Length = 1902
Score = 246 bits (629), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 161/481 (33%), Positives = 253/481 (52%), Gaps = 55/481 (11%)
Query: 621 PNSLIHLIRTKIHLLPRAQKLPGENKSLRPPGAF--KKKSDLSVKDGHVFLMEYCEERPL 678
P+S++ LI+ H+ +A++ E + F + DL+ KDG + L+E+ EE P
Sbjct: 641 PHSVLPLIK---HIKKKAKQREQERIASGGGDVFFMRTPEDLTGKDGELVLIEFSEEHPP 697
Query: 679 LLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLTLEPGDKSPFLGDIKAGCSQS 738
L++ GM + + YY++ + DQ G + SPFLG + G S
Sbjct: 698 LMNQVGMCSKVKNYYKRKAGKDQGPQKYKYGETAYAHT--------SPFLGILTPGQSIQ 749
Query: 739 SLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRRIDKVAVVAQQEPLMEVMSPGSKNLQ 798
++E NMYRAP++ HK+ TDFL++R+ + + IR +D + V Q+ PL EV P SK
Sbjct: 750 AVENNMYRAPIYEHKIPETDFLVIRT-RQQYYIREMDALFVAGQECPLYEVPGPNSKRAN 808
Query: 799 TYSINRMLVNVYREF---SAAAKRGLLPCIGVDELSVQFPNLSEAIIRKKLKECAFLRRD 855
+ + + V +YR F + +R I +D++ FP+ SE+ IRK+LK CA +R
Sbjct: 809 NFVRDFLQVFIYRLFWKSNDTPRR-----IKMDDIKKAFPSHSESSIRKRLKLCADFKRT 863
Query: 856 GNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRLKHLGITQLTLPASISSA 915
G W +K F +P+E ++R + PE C+Y SM A RLK G + L
Sbjct: 864 GMDSNWWVIKPDFRLPTEEEIRAMVSPEQCCAYFSMIAAEQRLKDAGYGEKFLFTPQDDD 923
Query: 916 MSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLG 975
DE + L ++ E+++ PWN + ++ Q + L++ G DP+G G G
Sbjct: 924 -----DEEMQLK----MDDEVKVAPWNTTRAYI----QAMKGKCLLQLAGPADPTGCGEG 970
Query: 976 FSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLRRLSMEAAREVLLKFNVPEEMIA 1035
FSYVR K ++S +++A R TVTGTDADLRRLS+ A+ +L KF VPEE I
Sbjct: 971 FSYVRVPNKPTISKE--EQEAQPKR---TVTGTDADLRRLSLNNAKALLRKFGVPEEEIK 1025
Query: 1036 KQTRWHRIAMIRKLSSEQAASG---------------VQLQQQTRGKCQEIWDRQVQSLS 1080
K +RW I ++R LS+E+A +G + Q++ + +CQ I+D Q + LS
Sbjct: 1026 KLSRWEVIDVVRTLSTEKAKAGEEGMTKFSRGNRFSIAEHQERYKEECQRIFDLQNRVLS 1085
Query: 1081 A 1081
+
Sbjct: 1086 S 1086
Score = 47.0 bits (110), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 18 DEEEYEDVSGGNRLLGFMFGNVDYAGDLDVDYLDEDAKEHLAAVADKLGPS 68
+EE +D++ G + GF+FGN+D G L+ D LD +AK+H+A++ ++LG S
Sbjct: 5 EEENDKDITSGINMTGFLFGNIDDNGQLEDDILDPEAKQHIASL-NRLGLS 54
>gi|195498971|ref|XP_002096751.1| GE24876 [Drosophila yakuba]
gi|194182852|gb|EDW96463.1| GE24876 [Drosophila yakuba]
Length = 2137
Score = 246 bits (629), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 148/445 (33%), Positives = 234/445 (52%), Gaps = 44/445 (9%)
Query: 654 FKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCL 713
+ DLS +DG + L E+CEE P L++ GM + + YY++ + D G
Sbjct: 712 MRNPEDLSGRDGDIVLAEFCEEHPPLMNQVGMCSKIKNYYKRKAEKDSGPQDYVYGEVAF 771
Query: 714 GNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRR 773
+ SPFLG + G ++E NMYRAP++ HK+A DFL++R+ + IR
Sbjct: 772 AHT--------SPFLGILHPGQCIQAIENNMYRAPIYPHKMAHNDFLVIRT-RNNYWIRS 822
Query: 774 IDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQ 833
++ + V Q+ PL EV P SK ++ + + V +YR F + R I +D++
Sbjct: 823 VNSIYTVGQECPLYEVPGPNSKRANNFTRDFLQVFIYRLFWKS--RDNPRRIRMDDIKQA 880
Query: 834 FPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQA 893
FP SE+ IRK+LK+CA +R G W +K F +PSE ++R + PE C+Y SM A
Sbjct: 881 FPAHSESSIRKRLKQCADFKRTGMDSNWWVIKPEFRLPSEEEIRAMVSPEQCCAYFSMIA 940
Query: 894 GLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQ 953
RLK G + L A P E A ++ E+++ PWN + ++ Q
Sbjct: 941 AEQRLKDAGYGEKFLFA---------PQEDDDEEAQLKLDDEVKVAPWNTTRAYI----Q 987
Query: 954 DRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLR 1013
L+++G DP+G G GFSYVR K + + K+ ++ +VTGTDADLR
Sbjct: 988 AMRGKCLLQLSGPADPTGCGEGFSYVRVPNKPTQT-----KEEQESQPKRSVTGTDADLR 1042
Query: 1014 RLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------V 1058
RL ++ A+E+L +F VPEE I K +RW I ++R LS+E+A +G
Sbjct: 1043 RLPLQRAKELLRQFKVPEEEIKKLSRWEVIDVVRTLSTEKAKAGEEGMDKFSRGNRFSIA 1102
Query: 1059 QLQQQTRGKCQEIWDRQVQSLSAAD 1083
+ Q++ + +CQ I+D Q + L++++
Sbjct: 1103 EHQERYKEECQRIFDLQNRVLASSE 1127
>gi|7327282|gb|AAB26991.2| transcription factor TFIID 230 kda subunit [Drosophila melanogaster]
Length = 2068
Score = 246 bits (629), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 148/445 (33%), Positives = 234/445 (52%), Gaps = 44/445 (9%)
Query: 654 FKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCL 713
+ DLS +DG + L E+CEE P L++ GM + + YY++ + D G
Sbjct: 713 MRNPEDLSGRDGDIVLAEFCEEHPPLINQVGMCSKIKNYYKRKAEKDSGPQDYVYGEVAF 772
Query: 714 GNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRR 773
+ SPFLG + G ++E NMYRAP++ HK+A DFL++R+ + IR
Sbjct: 773 AHT--------SPFLGILHPGQCIQAIENNMYRAPIYPHKMAHNDFLVIRT-RNNYWIRS 823
Query: 774 IDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQ 833
++ + V Q+ PL EV P SK ++ + + V +YR F + R I +D++
Sbjct: 824 VNSIYTVGQECPLYEVPGPNSKRANNFTRDFLQVFIYRLFWKS--RDNPRRIRMDDIKQA 881
Query: 834 FPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQA 893
FP SE+ IRK+LK+CA +R G W +K F +PSE ++R + PE C+Y SM A
Sbjct: 882 FPAHSESSIRKRLKQCADFKRTGMDSNWWVIKPEFRLPSEEEIRAMVSPEQCCAYFSMIA 941
Query: 894 GLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQ 953
RLK G + L A P E A ++ E+++ PWN + ++ Q
Sbjct: 942 AEQRLKDAGYGEKFLFA---------PQEDDDEEAQLKLDDEVKVAPWNTTRAYI----Q 988
Query: 954 DRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLR 1013
L+++G DP+G G GFSYVR K + + K+ ++ +VTGTDADLR
Sbjct: 989 AMRGKCLLQLSGPADPTGCGEGFSYVRVPNKPTQT-----KEEQESQPKRSVTGTDADLR 1043
Query: 1014 RLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------V 1058
RL ++ A+E+L +F VPEE I K +RW I ++R LS+E+A +G
Sbjct: 1044 RLPLQRAKELLRQFKVPEEEIKKLSRWEVIDVVRTLSTEKAKAGEEGMDKFSRGNRFSIA 1103
Query: 1059 QLQQQTRGKCQEIWDRQVQSLSAAD 1083
+ Q++ + +CQ I+D Q + L++++
Sbjct: 1104 EHQERYKEECQRIFDLQNRVLASSE 1128
>gi|194899099|ref|XP_001979100.1| GG13589 [Drosophila erecta]
gi|190650803|gb|EDV48058.1| GG13589 [Drosophila erecta]
Length = 2137
Score = 246 bits (629), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 148/445 (33%), Positives = 234/445 (52%), Gaps = 44/445 (9%)
Query: 654 FKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCL 713
+ DLS +DG + L E+CEE P L++ GM + + YY++ + D G
Sbjct: 712 MRNPEDLSGRDGDIVLAEFCEEHPPLMNQVGMCSKIKNYYKRKAEKDSGPQDYVYGEVAF 771
Query: 714 GNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRR 773
+ SPFLG + G ++E NMYRAP++ HK+A DFL++R+ + IR
Sbjct: 772 AHT--------SPFLGILHPGQCIQAIENNMYRAPIYPHKMAHNDFLVIRT-RNNYWIRS 822
Query: 774 IDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQ 833
++ + V Q+ PL EV P SK ++ + + V +YR F + R I +D++
Sbjct: 823 VNSIYTVGQECPLYEVPGPNSKRANNFTRDFLQVFIYRLFWKS--RDNPRRIRMDDIKQA 880
Query: 834 FPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQA 893
FP SE+ IRK+LK+CA +R G W +K F +PSE ++R + PE C+Y SM A
Sbjct: 881 FPAHSESSIRKRLKQCADFKRTGMDSNWWVIKPEFRLPSEEEIRAMVSPEQCCAYFSMIA 940
Query: 894 GLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQ 953
RLK G + L A P E A ++ E+++ PWN + ++ Q
Sbjct: 941 AEQRLKDAGYGEKFLFA---------PQEDDDEEAQLKLDDEVKVAPWNTTRAYI----Q 987
Query: 954 DRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLR 1013
L+++G DP+G G GFSYVR K + + K+ ++ +VTGTDADLR
Sbjct: 988 AMRGKCLLQLSGPADPTGCGEGFSYVRVPNKPTQT-----KEEQESQPKRSVTGTDADLR 1042
Query: 1014 RLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------V 1058
RL ++ A+E+L +F VPEE I K +RW I ++R LS+E+A +G
Sbjct: 1043 RLPLQRAKELLRQFKVPEEEIKKLSRWEVIDVVRTLSTEKAKAGEEGMDKFSRGNRFSIA 1102
Query: 1059 QLQQQTRGKCQEIWDRQVQSLSAAD 1083
+ Q++ + +CQ I+D Q + L++++
Sbjct: 1103 EHQERYKEECQRIFDLQNRVLASSE 1127
>gi|332023548|gb|EGI63784.1| Transcription initiation factor TFIID subunit 1 [Acromyrmex
echinatior]
Length = 1899
Score = 246 bits (628), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 152/438 (34%), Positives = 234/438 (53%), Gaps = 44/438 (10%)
Query: 659 DLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLT 718
DL+ +DG + L+E+ EE P L++ GM + + YY++ + DQ G +
Sbjct: 672 DLTGRDGELVLVEFSEEHPPLMNQVGMCSKVKNYYKRRAGKDQGPQTYKYGETAYAHT-- 729
Query: 719 LEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRRIDKVA 778
SPFLG + G S ++E NMYRAP++ HK+ TDFL++RS + + +R +D +
Sbjct: 730 ------SPFLGILTPGQSIQAIENNMYRAPLYEHKIPETDFLVIRS-RQQYYVREMDALF 782
Query: 779 VVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLS 838
V Q+ PL EV P SK + + + V +YR F + R I +D++ FP+ S
Sbjct: 783 VAGQECPLYEVPGPNSKRANNFVRDFLQVFIYRLFWKS--RDTPRRIKMDDIKKAFPSHS 840
Query: 839 EAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRL 898
E+ IRK+LK CA +R G W +K F +P+E ++R + PE C+Y SM A RL
Sbjct: 841 ESSIRKRLKLCADFKRTGMDSNWWVIKPDFRLPTEEEIRAMVSPEQCCAYFSMIAAEQRL 900
Query: 899 KHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENI 958
K G + L DE + L ++ E+++ PWN + ++ Q +
Sbjct: 901 KDAGYGEKFLFTPQDDD-----DEDMQLK----MDDEVKVAPWNTTRAYI----QAMKGK 947
Query: 959 ERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLRRLSME 1018
L++ G DP+G G GFSYVR K ++S +++A R TVTGTDADLRRLS+
Sbjct: 948 CLLQLAGPADPTGCGEGFSYVRVPNKPTISKE--EQEAQPKR---TVTGTDADLRRLSLN 1002
Query: 1019 AAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------VQLQQQ 1063
A+ +L KF VPEE I K +RW I ++R LS+E+A +G + Q++
Sbjct: 1003 NAKALLRKFGVPEEEIKKLSRWEVIDVVRTLSTEKAKAGEEGMTKFSRGNRFSIAEHQER 1062
Query: 1064 TRGKCQEIWDRQVQSLSA 1081
+ +CQ I+D Q + LS+
Sbjct: 1063 YKEECQRIFDLQNRVLSS 1080
Score = 50.4 bits (119), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 18 DEEEYEDVSGGNRLLGFMFGNVDYAGDLDVDYLDEDAKEHLAAVADKLGPS 68
DEE +D++ G + GF+FGN+D G L+ D LD DAK+HLA+++ +LG S
Sbjct: 5 DEENEKDLASGLNITGFLFGNIDDNGQLEDDILDPDAKQHLASLS-RLGLS 54
>gi|195568775|ref|XP_002102389.1| GD19886 [Drosophila simulans]
gi|194198316|gb|EDX11892.1| GD19886 [Drosophila simulans]
Length = 2131
Score = 246 bits (627), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 147/445 (33%), Positives = 234/445 (52%), Gaps = 44/445 (9%)
Query: 654 FKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCL 713
+ DLS +DG + L E+CEE P L++ GM + + YY++ + D G
Sbjct: 712 MRNPEDLSGRDGDIVLAEFCEEHPPLINQVGMCSKIKNYYKRKAEKDSGPQDFVYGEVAF 771
Query: 714 GNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRR 773
+ SPFLG + G ++E NMYRAP++ HK+A DFL++R+ + IR
Sbjct: 772 AHT--------SPFLGILHPGQCIQAIENNMYRAPIYPHKMAHNDFLVIRT-RNNYWIRS 822
Query: 774 IDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQ 833
++ + + Q+ PL EV P SK ++ + + V +YR F + R I +D++
Sbjct: 823 VNSIYTLGQECPLYEVPGPNSKRANNFTRDFLQVFIYRLFWKS--RDNPRRIRMDDIKQA 880
Query: 834 FPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQA 893
FP SE+ IRK+LK+CA +R G W +K F +PSE ++R + PE C+Y SM A
Sbjct: 881 FPAHSESSIRKRLKQCADFKRTGMDSNWWVIKPEFRLPSEEEIRAMVSPEQCCAYFSMIA 940
Query: 894 GLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQ 953
RLK G + L A P E A ++ E+++ PWN + ++ Q
Sbjct: 941 AEQRLKDAGYGEKFLFA---------PQEDDDEEAQLKLDDEVKVAPWNTTRAYI----Q 987
Query: 954 DRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLR 1013
L+++G DP+G G GFSYVR K + + K+ ++ +VTGTDADLR
Sbjct: 988 AMRGKCLLQLSGPADPTGCGEGFSYVRVPNKPTQT-----KEEQESQPKRSVTGTDADLR 1042
Query: 1014 RLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------V 1058
RL ++ A+E+L +F VPEE I K +RW I ++R LS+E+A +G
Sbjct: 1043 RLPLQRAKELLRQFKVPEEEIKKLSRWEVIDVVRTLSTEKAKAGEEGMDKFSRGNRFSIA 1102
Query: 1059 QLQQQTRGKCQEIWDRQVQSLSAAD 1083
+ Q++ + +CQ I+D Q + L++++
Sbjct: 1103 EHQERYKEECQRIFDLQNRVLASSE 1127
>gi|328701651|ref|XP_003241670.1| PREDICTED: transcription initiation factor TFIID subunit 1-like
isoform 1 [Acyrthosiphon pisum]
Length = 1800
Score = 246 bits (627), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 158/469 (33%), Positives = 244/469 (52%), Gaps = 49/469 (10%)
Query: 659 DLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLT 718
DL+ +DG + L+EYCEE P LL+ GM + + YY++ D L G +
Sbjct: 619 DLTGRDGSIILVEYCEEHPPLLNQVGMCSKIKNYYKRKIGKDPGPPSLRFGEIAYAHT-- 676
Query: 719 LEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRRIDKVA 778
SPFLG + G + +E N+YR P++ HK DFLL+R+ + IR ID +
Sbjct: 677 ------SPFLGVLSPGRTIQVIENNLYRTPIYEHKPLENDFLLIRT-RHAYYIREIDALF 729
Query: 779 VVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLS 838
Q PL EV P SK + + + V +YR F + I +D++ FP+ S
Sbjct: 730 TSGQLCPLYEVPGPNSKRANNFVRDFLQVFIYRLFWKSTDYPRR--IKMDDIKKAFPSHS 787
Query: 839 EAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRL 898
E+ IRK+LK CA +R G+ W +K F +PSE ++R + PE C+Y SM A RL
Sbjct: 788 ESSIRKRLKLCADFKRTGSDSNWWVIKPDFRLPSEEEIRAMVSPEQCCAYFSMIAAEQRL 847
Query: 899 KHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENI 958
K G + + S+ DE + L ++ E+++ PW + ++ Q +N
Sbjct: 848 KDAGYGEKFILTSLEDD-----DEEMQLK----MDDEIKVAPWMTTRAYI----QAMKNK 894
Query: 959 ERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLRRLSME 1018
L++TG DP+G G GFSYVR K +++ +++A R VTGTDADLRRLS+
Sbjct: 895 CLLQLTGPADPTGCGEGFSYVRVPNKPTLNKE--EQEAQPKR---MVTGTDADLRRLSLN 949
Query: 1019 AAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------VQLQQQ 1063
A+ +L KF VPEE I K +RW I ++R LS+E+A +G + Q++
Sbjct: 950 NAKALLRKFAVPEEEIKKLSRWEVIDVVRTLSTEKAKAGEEGMTKFSRGNRFSIAEHQER 1009
Query: 1064 TRGKCQEIWDRQVQSLS-----AADDDEIGSDSEHSDLDSFAGDLENLL 1107
+ +CQ I+D Q + LS + D+ E + + SD++ ++EN+L
Sbjct: 1010 YKEECQRIFDLQNRVLSSHELLSTDEGESFDEEDCSDIEEMGKNIENML 1058
>gi|328701653|ref|XP_003241671.1| PREDICTED: transcription initiation factor TFIID subunit 1-like
isoform 2 [Acyrthosiphon pisum]
Length = 1783
Score = 246 bits (627), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 158/469 (33%), Positives = 244/469 (52%), Gaps = 49/469 (10%)
Query: 659 DLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLT 718
DL+ +DG + L+EYCEE P LL+ GM + + YY++ D L G +
Sbjct: 619 DLTGRDGSIILVEYCEEHPPLLNQVGMCSKIKNYYKRKIGKDPGPPSLRFGEIAYAHT-- 676
Query: 719 LEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRRIDKVA 778
SPFLG + G + +E N+YR P++ HK DFLL+R+ + IR ID +
Sbjct: 677 ------SPFLGVLSPGRTIQVIENNLYRTPIYEHKPLENDFLLIRT-RHAYYIREIDALF 729
Query: 779 VVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLS 838
Q PL EV P SK + + + V +YR F + I +D++ FP+ S
Sbjct: 730 TSGQLCPLYEVPGPNSKRANNFVRDFLQVFIYRLFWKSTDYPRR--IKMDDIKKAFPSHS 787
Query: 839 EAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRL 898
E+ IRK+LK CA +R G+ W +K F +PSE ++R + PE C+Y SM A RL
Sbjct: 788 ESSIRKRLKLCADFKRTGSDSNWWVIKPDFRLPSEEEIRAMVSPEQCCAYFSMIAAEQRL 847
Query: 899 KHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENI 958
K G + + S+ DE + L ++ E+++ PW + ++ Q +N
Sbjct: 848 KDAGYGEKFILTSLEDD-----DEEMQLK----MDDEIKVAPWMTTRAYI----QAMKNK 894
Query: 959 ERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLRRLSME 1018
L++TG DP+G G GFSYVR K +++ +++A R VTGTDADLRRLS+
Sbjct: 895 CLLQLTGPADPTGCGEGFSYVRVPNKPTLNKE--EQEAQPKR---MVTGTDADLRRLSLN 949
Query: 1019 AAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------VQLQQQ 1063
A+ +L KF VPEE I K +RW I ++R LS+E+A +G + Q++
Sbjct: 950 NAKALLRKFAVPEEEIKKLSRWEVIDVVRTLSTEKAKAGEEGMTKFSRGNRFSIAEHQER 1009
Query: 1064 TRGKCQEIWDRQVQSLS-----AADDDEIGSDSEHSDLDSFAGDLENLL 1107
+ +CQ I+D Q + LS + D+ E + + SD++ ++EN+L
Sbjct: 1010 YKEECQRIFDLQNRVLSSHELLSTDEGESFDEEDCSDIEEMGKNIENML 1058
>gi|405963185|gb|EKC28782.1| Transcription initiation factor TFIID subunit 1 [Crassostrea gigas]
Length = 1875
Score = 245 bits (625), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 157/474 (33%), Positives = 235/474 (49%), Gaps = 57/474 (12%)
Query: 659 DLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLT 718
DLS DG + + EY EE P LL GM + YY++ D G
Sbjct: 698 DLSGMDGELIMAEYSEEYPPLLMQVGMATKIKNYYKRKPGKDSQPPAYKYGE-------- 749
Query: 719 LEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRRIDKVA 778
L SPFLG + G S + E NM+RAP++ HKV TDFL++R+ + IR ++ +
Sbjct: 750 LSYAHTSPFLGTLVPGNSIQAFENNMFRAPIYEHKVPDTDFLIIRN-RQNFFIRDVNTIY 808
Query: 779 VVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLS 838
V Q+ P+ EV P SK + + + V +YR F + I +D++ FPN S
Sbjct: 809 TVGQECPMFEVPGPNSKRANNFIRDFLQVFIYRLFWKSKDNPRR--IKMDDIKKAFPNHS 866
Query: 839 EAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRL 898
E+ IRK+LK CA +R G W +K F +P+E ++R + PE C Y SM A RL
Sbjct: 867 ESSIRKRLKLCADFKRTGMDSNWWVVKPDFRLPTEEEMRAMVSPEQCCGYFSMLAAEQRL 926
Query: 899 KHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENI 958
K G + +L A P++ S IE E++ PWN + +++ +
Sbjct: 927 KDAGYGEKSLFA---------PEDDNEEDTQSKIEDEVKTAPWNTTRAYISAV----KGK 973
Query: 959 ERLEITGVGDPSGRGLGFSYVRAA----PKASVSSAMVKKKAAANRGGSTVTGTDADLRR 1014
L++ G DP+G G GFSYV+ PK +KK TVTGTDADLR+
Sbjct: 974 CLLDLNGPADPTGCGEGFSYVKVPNKPQPKEEGKEQTPQKK--------TVTGTDADLRK 1025
Query: 1015 LSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG----------------- 1057
LS++ A+++L KF VP+ I K +RW I ++R +S+EQA +G
Sbjct: 1026 LSLKDAKQLLRKFQVPDSEIKKLSRWEVIDVVRTMSTEQAKAGQEGKAGMSKFARGNRFS 1085
Query: 1058 -VQLQQQTRGKCQEIWDRQVQSLSAAD---DDEIGSDSEHSDLDSFAGDLENLL 1107
+ Q++ R +CQ I+D Q + L++ + DE S SD + +LE++L
Sbjct: 1086 VAEHQERYREECQRIFDLQNRVLASEEVLSTDEGSSSDNDSDFEEMGKNLESML 1139
Score = 53.1 bits (126), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 55/108 (50%), Gaps = 14/108 (12%)
Query: 15 DEDDEEEYEDVSGG-NRLLGFMFGNVDYAGDLDVDYLDEDAKEHLAAVADKLGPSLTDID 73
D +DE + D G + + GF+FGN+D GDL D+LDE++K HL +++ G + +
Sbjct: 2 DSEDEHDPSDSHGTMSSMTGFLFGNIDEKGDLTEDFLDEESKRHLGSLSSLGGIGVMVKE 61
Query: 74 VWNSQSCFQLFCSYCLLSVNSPQPPVDAVEQDYDKKAEDAVDYEDIDE 121
+ + N Q D++ +D+ K+ AVDY DI E
Sbjct: 62 ITGDEE-------------NDRQDDDDSMSEDFSAKSPTAVDYSDITE 96
>gi|478993|pir||S32373 DNA-binding protein TAF-II 250K - fruit fly (Drosophila sp.)
(fragment)
gi|299032|gb|AAB26051.1| TATA-binding protein associated factor II 250, TBP associated factor
II 250, TAFII250 {C-terminal} [Drosophila, Peptide
Partial, 1490 aa]
gi|446402|prf||1911408A transcription factor IID
Length = 1490
Score = 244 bits (624), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 148/440 (33%), Positives = 232/440 (52%), Gaps = 44/440 (10%)
Query: 659 DLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLT 718
DLS +DG + L E+CEE P L++ GM + + YY++ + D G +
Sbjct: 58 DLSGRDGDIVLAEFCEEHPPLINQVGMCSKIKNYYKRKAEKDSGPQDFVYGEVAFAHT-- 115
Query: 719 LEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRRIDKVA 778
SPFLG + G ++E NMYRAP++ HK+A DFL++R+ + IR ++ +
Sbjct: 116 ------SPFLGILHPGQCIQAIENNMYRAPIYPHKMAHNDFLVIRT-RNNYWIRSVNSIY 168
Query: 779 VVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLS 838
V Q+ PL EV P SK ++ + + V +YR F + R I +D++ FP S
Sbjct: 169 TVGQECPLYEVPGPNSKRANNFTRDFLQVFIYRLFWKS--RDNPRRIRMDDIKQAFPAHS 226
Query: 839 EAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRL 898
E+ IRK+LK+CA +R G W +K F +PSE ++R + PE C Y SM A RL
Sbjct: 227 ESSIRKRLKQCADFKRTGMDSNWWVIKPEFRLPSEEEIRAMVSPEQCCGYFSMIAAEQRL 286
Query: 899 KHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENI 958
K G + L A P E A ++ E+++ PWN + ++ Q
Sbjct: 287 KDAGYGEKFLFA---------PQEDDDEEAQMKLDDEVKVAPWNTTRAYI----QAMRGK 333
Query: 959 ERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLRRLSME 1018
L+++G DP+G G GFSYVR K + + K+ ++ +VTGTDADLRRL ++
Sbjct: 334 CLLQLSGPADPTGCGEGFSYVRVPNKPTQT-----KEEQESQPKRSVTGTDADLRRLPLQ 388
Query: 1019 AAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------VQLQQQ 1063
A+E+L +F VPEE I K +RW I ++R LS+E+A +G + Q++
Sbjct: 389 RAKELLRQFKVPEEEIKKLSRWEVIDVVRTLSTEKAKAGEEGMDKFSRGNRFSIAEHQER 448
Query: 1064 TRGKCQEIWDRQVQSLSAAD 1083
+ +CQ I+D Q + L++++
Sbjct: 449 YKEECQRIFDLQNRVLASSE 468
>gi|307181429|gb|EFN69024.1| Transcription initiation factor TFIID subunit 1 [Camponotus
floridanus]
Length = 1912
Score = 244 bits (623), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 151/438 (34%), Positives = 233/438 (53%), Gaps = 44/438 (10%)
Query: 659 DLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLT 718
DL+ +DG + L+E+ E P L++ GM + + YY++ + DQ G +
Sbjct: 675 DLTGRDGELVLVEFSEAPPPLMNQVGMCSKMKNYYKRRAGKDQGPQTYKYGETAYAHT-- 732
Query: 719 LEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRRIDKVA 778
SPFLG + G S ++E NMYRAP++ HK+ TDFL++R+ + + +R +D +
Sbjct: 733 ------SPFLGILTPGQSIQAIENNMYRAPIYEHKIPDTDFLVIRT-RQQYYVREMDALF 785
Query: 779 VVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLS 838
V Q+ PL EV P SK + + + V +YR F + R I +D++ FP+ S
Sbjct: 786 VAGQECPLYEVPGPNSKRANNFVRDFLQVFIYRLFWKS--RDTPRRIKMDDIKKAFPSHS 843
Query: 839 EAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRL 898
E+ IRK+LK CA +R G W +K F +P+E ++R + PE CSY SM A RL
Sbjct: 844 ESSIRKRLKLCADFKRTGMDSNWWVIKPDFRLPTEEEIRAMVSPEQCCSYFSMIAAEQRL 903
Query: 899 KHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENI 958
K G + L DE + L ++ E+++ PWN + ++ Q +
Sbjct: 904 KDAGYGEKFLFTPQDDD-----DEDMQLK----MDDEVKVAPWNTTRAYI----QAMKGK 950
Query: 959 ERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLRRLSME 1018
L++ G DP+G G GFSYVR K ++S +++A R TVTGTDADLRRLS+
Sbjct: 951 CLLQLAGPADPTGCGEGFSYVRVPNKPTISKE--EQEAQPKR---TVTGTDADLRRLSLN 1005
Query: 1019 AAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------VQLQQQ 1063
A+ +L KF VPEE I K +RW I ++R LS+E+A +G + Q++
Sbjct: 1006 NAKALLRKFGVPEEEIKKLSRWEVIDVVRTLSTEKAKAGEEGMTKFSRGNRFSIAEHQER 1065
Query: 1064 TRGKCQEIWDRQVQSLSA 1081
+ +CQ I+D Q + LS+
Sbjct: 1066 YKEECQRIFDLQNRVLSS 1083
Score = 45.4 bits (106), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 57/106 (53%), Gaps = 2/106 (1%)
Query: 17 DDEEEYE-DVSGGNRLLGFMFGNVDYAGDLDVDYLDEDAKEHLAAVADKLGPSLTDIDVW 75
D EEE E D+ + GF+FGN+D G L+ D LD +AK+HLA+++ +LG S ++
Sbjct: 3 DSEEENEKDLVSDLNITGFLFGNIDDNGQLEDDILDPEAKQHLASLS-RLGLSSFISEMM 61
Query: 76 NSQSCFQLFCSYCLLSVNSPQPPVDAVEQDYDKKAEDAVDYEDIDE 121
++ + + V+ + DY K+ A+D+ DI+E
Sbjct: 62 SNDCTTEEKENKVDNKTEGQNTTVNDTDVDYFTKSPTALDFSDINE 107
>gi|351704228|gb|EHB07147.1| Transcription initiation factor TFIID subunit 1 [Heterocephalus
glaber]
Length = 1584
Score = 244 bits (623), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 212/720 (29%), Positives = 324/720 (45%), Gaps = 116/720 (16%)
Query: 521 FSKHSLQNRDMMEGSWLDNIIWEPVDA---VGKPKLILDLQDEQMLFEILDNKDDEHPLL 577
+S + N D++ G W D+IIW+ + P L LD DE ++ EI D K++
Sbjct: 324 YSIFPIDNEDLVYGRWEDSIIWDAQAMPWLLEPPVLTLDPNDENLIVEIPDEKEEATSNS 383
Query: 578 HAGAMIITRSAKPSDFKPAESVKLFYLGKELEDHKSLAD--------QNVRPNSLIHLIR 629
+ S K S F ++ + E++D +L+ Q +R ++I+
Sbjct: 384 PSKESKKESSLKKSRFLLGKTGVINVSQPEVKDPWNLSSDEYYYPKQQGLRGTFGGNIIQ 443
Query: 630 TKIHLLPRAQKLPGENKSLRPPGAFKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANL 689
+ R GE +R DL+ KDG + L EY EE L+ GM +
Sbjct: 444 MREQ--ERQASGGGETFFMR------TSQDLTAKDGDLILAEYSEENGPLIMQVGMATKI 495
Query: 690 CTYYQKSSPGDQAGALLCSGNNCLGNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPV 749
YY K PG A C G + SPFLG + G + E N+ APV
Sbjct: 496 KNYY-KWKPGKDPRASECK----YGETVYCH---TSPFLGSLHPGQLLQAFENNLLHAPV 547
Query: 750 FTHKVATTDFLLVRSAKGKISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNV 809
+ HK+ TDFL++R+ +G IR + V VV +Q PL EV P SK T+ N + V +
Sbjct: 548 YLHKMPETDFLIIRTRQG-YYIRELVDVFVVGRQYPLFEVPEPNSKRANTHIRNFLQVFI 606
Query: 810 YREFSAAAKRGLLPCIGVDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFH 869
YR F + R I ++++ FP+ SE+ IRK+LK CA + G W +K F
Sbjct: 607 YRLFWKSKDRPRR--IQMEDIKKGFPSHSESSIRKRLKLCADFKWTGMDSNWWVLKSDFR 664
Query: 870 IPSEGDLRKLAYPEHVCSYESMQAGLYRLKHLGITQLTLPASISSA-------------- 915
+P+E ++R + E C+Y SM A RLK L P +
Sbjct: 665 LPTEEEIRAVVSSEQCCAYYSMIATEQRLKAFENNLLHAPVYLHKMPETDFLIIRTRQGY 724
Query: 916 -MSQLPD--------------EAIALAAASHIERELQITP--WNLSSNFVACTNQDRENI 958
+ +L D E + A +HI LQ+ WN + F+A R+ +
Sbjct: 725 YIRELVDVFVVGRQYPLFEVPEPNSKRANTHIRNFLQVRTALWNTTRAFIAAMK--RKCL 782
Query: 959 ERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLRRLSME 1018
LE+TGV DP+G G GFSYV+ K + K TVTGTDADLRRLS++
Sbjct: 783 --LEVTGVADPTGCGEGFSYVKIPNKPTQQ----KDDKEPQPVKKTVTGTDADLRRLSLK 836
Query: 1019 AAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------VQLQQQ 1063
A+++L KF VPE+ I K +RW I MIR +S+EQA SG + Q++
Sbjct: 837 NAKQLLRKFGVPEQEIKKLSRWEVIDMIRTMSTEQARSGEGPMSKFARGSRFSVAEHQER 896
Query: 1064 TRGKCQEIWDRQVQSLSAAD---DDEIGSDSEHSDLDSFAGDLENLLDAEEFEEEESNYD 1120
+ +CQ I+ Q + LS+ + D S +E SD + ++EN+L ++ +
Sbjct: 897 YKEECQHIFHLQNKVLSSTEVLSTDTDSSSAEDSDFEEMGKNIENMLQNKKTSSQ----- 951
Query: 1121 TKHDKVEGVKGLKMRRRPIQVQAEEEIEDEAAEAAELCRLLMDDDEAELKKKKKKTKAQV 1180
+ R P E E EL R+L+ + E++K++++ + Q+
Sbjct: 952 -------------LSREP-----------EEQERKELQRMLLGEHREEMQKERRRIQEQL 987
>gi|198419692|ref|XP_002127643.1| PREDICTED: similar to Transcription initiation factor TFIID subunit 1
(Transcription initiation factor TFIID 250 kDa subunit)
(TAF(II)250) (TAFII-250) (TAFII250) (TBP-associated
factor 250 kDa) (p250) (Cell cycle gene 1 protein) [Ciona
intestinalis]
Length = 1909
Score = 244 bits (622), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 151/440 (34%), Positives = 224/440 (50%), Gaps = 41/440 (9%)
Query: 659 DLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLT 718
DLS DGH+ L EY EE P LLS GM + Y+++ D G +
Sbjct: 695 DLSALDGHLILAEYSEEYPPLLSQVGMAVKVKNYHKRKPDKDSDPPRYRYGETVFSH--- 751
Query: 719 LEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRRIDKVA 778
SPFLG + G S + E NMYRAP++ H+ TDFL++RS + IR + +
Sbjct: 752 -----SSPFLGPLAPGQSLQAFECNMYRAPIYEHRSCGTDFLIIRS-RHNYFIRHVPYIF 805
Query: 779 VVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLS 838
+ Q PLMEV P SK + + + V +YR F+ ++ + I ++E+ FPN S
Sbjct: 806 TIGQLCPLMEVPGPNSKKATNHVRDFLQVFIYRMFAKSSDKP--KKIRMEEIRKAFPNHS 863
Query: 839 EAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRL 898
E+ IRK+LK CA R G W +K F +P+E ++R + PE CS+ SM A RL
Sbjct: 864 ESSIRKRLKLCADFHRTGQDSNWWVIKNDFRLPTEEEMRAMVSPEQTCSFYSMIAAEQRL 923
Query: 899 KHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENI 958
K G + T M P++ ++ E+ PWN + F++ +
Sbjct: 924 KDAGYGEKT--------MLYQPEDDNEEEHQLKVDEEVLNAPWNTTRAFLSAI----KGK 971
Query: 959 ERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLRRLSME 1018
L++TG DP+G G GFSYV+ K S + ++A VTGTDADLRRLS+
Sbjct: 972 CLLQVTGPADPTGCGEGFSYVKVPMKPQQSK---QAESAPAPPKKLVTGTDADLRRLSLS 1028
Query: 1019 AAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------VQLQQQ 1063
A+++L KF VP+E I K +RW I ++R +S+EQA +G + Q++
Sbjct: 1029 NAKQLLKKFGVPDEEIRKLSRWEVIDVVRTMSTEQARAGEGGMSKFARGTRFSVAEHQEK 1088
Query: 1064 TRGKCQEIWDRQVQSLSAAD 1083
+ +CQ I+D Q + LS+ D
Sbjct: 1089 YKEECQRIFDLQNKVLSSRD 1108
Score = 43.1 bits (100), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 24/36 (66%)
Query: 31 LLGFMFGNVDYAGDLDVDYLDEDAKEHLAAVADKLG 66
L+GFMFGN+D G L+ D LDE +K HL ++ G
Sbjct: 14 LVGFMFGNIDKHGHLETDILDEKSKNHLVQLSTLAG 49
>gi|345315502|ref|XP_001517162.2| PREDICTED: transcription initiation factor TFIID subunit 1-like,
partial [Ornithorhynchus anatinus]
Length = 752
Score = 242 bits (618), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 154/444 (34%), Positives = 233/444 (52%), Gaps = 52/444 (11%)
Query: 659 DLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLT 718
DL+ KDG + L+EY EE P L+ GM + YY++ G +GA C G +
Sbjct: 270 DLTGKDGDLVLVEYSEEYPPLMMQVGMATKIKNYYKRKL-GKDSGAPACD----YGETVY 324
Query: 719 LEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRRIDKVA 778
SPFLG ++ G +LE N++RAP++ H++ TDFL+++ +G IR + +
Sbjct: 325 CH---TSPFLGSLQPGQLLQALENNLFRAPIYPHRMPGTDFLVIQKRQG-YYIREVKDIF 380
Query: 779 VVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLS 838
VV Q+ PL+EV +P SK T+ + + V +YR F + R P I ++++ FP +
Sbjct: 381 VVGQECPLIEVPAPKSKRAATHIRDFLQVFIYRLFGKSRDRP--PRIRMEDIKKAFPFHA 438
Query: 839 EAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRL 898
E+ IRK+L CA +R G W +K F +P+E +LR + PE C+Y SM A RL
Sbjct: 439 ESTIRKRLNVCADFQRTGMVSNWWVLKPNFRLPTEEELRAMVSPEQCCAYYSMIAAEQRL 498
Query: 899 KHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENI 958
K G + + A PDE S I+ E+ PWN + F++ +
Sbjct: 499 KDAGYGEKSFLA---------PDEENEEGFQSKIDDEVLTAPWNTTRAFLSAL----KGK 545
Query: 959 ERLEITGVGDPSGRGLGFSYVR----AAPKASVSSAMVKKKAAANRGGSTVTGTDADLRR 1014
L++TGV DP+G G GFSYV+ PK + VKK T+ GTDADLRR
Sbjct: 546 CLLDVTGVADPTGCGEGFSYVKIPFKPPPKDDKDTQPVKK---------TIMGTDADLRR 596
Query: 1015 LSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASGVQL-------------- 1060
LS++ A+++L F V EE I + +RW I ++R++S+EQA SGV +
Sbjct: 597 LSLKKAKQLLRTFGVAEEEIKQLSRWEVIDVVRRISTEQARSGVDITSKFARGLRGSVAE 656
Query: 1061 -QQQTRGKCQEIWDRQVQSLSAAD 1083
Q + R CQ I+D Q + L++ +
Sbjct: 657 TQDRYRMDCQRIFDLQNKILASTE 680
>gi|427792969|gb|JAA61936.1| Putative transcription initiation factor tfiid subunit taf1, partial
[Rhipicephalus pulchellus]
Length = 1833
Score = 241 bits (615), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 153/444 (34%), Positives = 231/444 (52%), Gaps = 54/444 (12%)
Query: 659 DLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGAL-LCSGNNCLGNVL 717
DL+ +DG V L EY EE P L+ GM + YY K PG +GA G +
Sbjct: 638 DLTGRDGEVILSEYSEEHPPLVMQVGMATKIKNYY-KRRPGKDSGAPEYKYGETAYAHT- 695
Query: 718 TLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRRIDKV 777
SPFLG + G S + E N++RAP++ H + TDFLL+R+ + IR ++ +
Sbjct: 696 -------SPFLGSLAPGQSLQAFENNLFRAPIYEHNLPDTDFLLIRT-RQHYYIREVETI 747
Query: 778 AVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREF---SAAAKRGLLPCIGVDELSVQF 834
V Q+ PL EV P SK + + + V +YR F + + +R I ++++ F
Sbjct: 748 YTVGQELPLFEVPGPNSKRANNFVRDFLQVFIYRLFWKSTDSPRR-----IKMEDIKKAF 802
Query: 835 PNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAG 894
P+ SE+ IRK+LK CA +R G W +K F +P+E ++R + PE C+Y SM +
Sbjct: 803 PSHSESSIRKRLKLCADFKRTGMDSNWWVLKPEFRLPTEDEIRAMVSPEQCCAYYSMISA 862
Query: 895 LYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQD 954
RLK G + +L A P++ ++ E++ PWN + F++
Sbjct: 863 EQRLKDAGYGEKSLFA---------PEDENDEEMQVKMDDEVKAAPWNTTRAFISSV--- 910
Query: 955 RENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRG--GSTVTGTDADL 1012
+ L++TGV DP+ G GFSYVR K S K+ AN+ TVTGTDADL
Sbjct: 911 -KGKCLLQLTGVADPTSCGEGFSYVRVPNKPQQS-----KEDGANQQPVKKTVTGTDADL 964
Query: 1013 RRLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG--------------- 1057
RRLS+ A+++L KF VPE+ I K +RW I ++R LS+EQA +G
Sbjct: 965 RRLSLSNAKQLLRKFGVPEDEIKKLSRWEVIDVVRTLSTEQAKAGEEAMSKFARGNRFSI 1024
Query: 1058 VQLQQQTRGKCQEIWDRQVQSLSA 1081
+ Q++ + +CQ I+D Q + LS+
Sbjct: 1025 AEHQERYKEECQRIFDLQNRVLSS 1048
>gi|427792981|gb|JAA61942.1| Putative transcription initiation factor tfiid subunit taf1, partial
[Rhipicephalus pulchellus]
Length = 1804
Score = 241 bits (615), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 153/444 (34%), Positives = 231/444 (52%), Gaps = 54/444 (12%)
Query: 659 DLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGAL-LCSGNNCLGNVL 717
DL+ +DG V L EY EE P L+ GM + YY K PG +GA G +
Sbjct: 609 DLTGRDGEVILSEYSEEHPPLVMQVGMATKIKNYY-KRRPGKDSGAPEYKYGETAYAHT- 666
Query: 718 TLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRRIDKV 777
SPFLG + G S + E N++RAP++ H + TDFLL+R+ + IR ++ +
Sbjct: 667 -------SPFLGSLAPGQSLQAFENNLFRAPIYEHNLPDTDFLLIRT-RQHYYIREVETI 718
Query: 778 AVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREF---SAAAKRGLLPCIGVDELSVQF 834
V Q+ PL EV P SK + + + V +YR F + + +R I ++++ F
Sbjct: 719 YTVGQELPLFEVPGPNSKRANNFVRDFLQVFIYRLFWKSTDSPRR-----IKMEDIKKAF 773
Query: 835 PNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAG 894
P+ SE+ IRK+LK CA +R G W +K F +P+E ++R + PE C+Y SM +
Sbjct: 774 PSHSESSIRKRLKLCADFKRTGMDSNWWVLKPEFRLPTEDEIRAMVSPEQCCAYYSMISA 833
Query: 895 LYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQD 954
RLK G + +L A P++ ++ E++ PWN + F++
Sbjct: 834 EQRLKDAGYGEKSLFA---------PEDENDEEMQVKMDDEVKAAPWNTTRAFISSV--- 881
Query: 955 RENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRG--GSTVTGTDADL 1012
+ L++TGV DP+ G GFSYVR K S K+ AN+ TVTGTDADL
Sbjct: 882 -KGKCLLQLTGVADPTSCGEGFSYVRVPNKPQQS-----KEDGANQQPVKKTVTGTDADL 935
Query: 1013 RRLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG--------------- 1057
RRLS+ A+++L KF VPE+ I K +RW I ++R LS+EQA +G
Sbjct: 936 RRLSLSNAKQLLRKFGVPEDEIKKLSRWEVIDVVRTLSTEQAKAGEEAMSKFARGNRFSI 995
Query: 1058 VQLQQQTRGKCQEIWDRQVQSLSA 1081
+ Q++ + +CQ I+D Q + LS+
Sbjct: 996 AEHQERYKEECQRIFDLQNRVLSS 1019
>gi|390178668|ref|XP_003736702.1| GA14575, isoform D [Drosophila pseudoobscura pseudoobscura]
gi|388859540|gb|EIM52775.1| GA14575, isoform D [Drosophila pseudoobscura pseudoobscura]
Length = 2165
Score = 239 bits (610), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 149/445 (33%), Positives = 229/445 (51%), Gaps = 53/445 (11%)
Query: 654 FKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCL 713
+ DLS KDG + L E+CEE P L++ GM + + YY++ + D G
Sbjct: 732 MRNPEDLSGKDGDIVLAEFCEEHPPLMNQVGMCSKIKNYYKRKAEKDSGPQDYVYGEVAF 791
Query: 714 GNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRR 773
+ SPFLG + G +LE NMYRAP++ HK+A DFL++R+ + IR
Sbjct: 792 AHT--------SPFLGILHPGQCIQALENNMYRAPIYPHKMAPNDFLIIRT-RNNYWIRA 842
Query: 774 IDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQ 833
+ + V Q+ PL EV P SK ++ R+F + R I +D++
Sbjct: 843 VTAIFTVGQECPLYEVPGPNSKRANNFT---------RDFLQS--RDQPRRIRMDDIKRA 891
Query: 834 FPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQA 893
FP SE+ IRK+LK+CA +R G W +K F +PSE ++R + PE C+Y SM A
Sbjct: 892 FPAHSESSIRKRLKQCADFKRTGMDSNWWVIKPEFRLPSEEEIRAMVSPEQCCAYFSMIA 951
Query: 894 GLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQ 953
RLK G + L A P E A ++ E+++ PWN + ++ Q
Sbjct: 952 AEQRLKDAGYGEKFLFA---------PQEDDDEEAQLKLDDEVKVAPWNTTRAYI----Q 998
Query: 954 DRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLR 1013
L+++G DP+G G GFSYVR K + + K+ ++ +VTGTDADLR
Sbjct: 999 AMRGKCLLQLSGPADPTGCGEGFSYVRVPNKPTQT-----KEEQESQPKRSVTGTDADLR 1053
Query: 1014 RLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------V 1058
RL ++ A+E+L KF VPEE I K +RW I ++R LS+E+A +G
Sbjct: 1054 RLPLQRAKELLRKFKVPEEEIKKLSRWEVIDVVRTLSTEKAKAGEEGMDKFSRGNRFSIA 1113
Query: 1059 QLQQQTRGKCQEIWDRQVQSLSAAD 1083
+ Q++ + +CQ I+D Q + L++++
Sbjct: 1114 EHQERYKEECQRIFDLQNRVLASSE 1138
>gi|322801474|gb|EFZ22135.1| hypothetical protein SINV_09804 [Solenopsis invicta]
Length = 2827
Score = 237 bits (605), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 152/445 (34%), Positives = 234/445 (52%), Gaps = 51/445 (11%)
Query: 659 DLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLT 718
DL+ +DG + L+E+ EE P L++ GM + + YY++ + DQ G +
Sbjct: 671 DLTGRDGELVLVEFSEEHPPLMNQVGMCSKVKNYYKRRAGKDQGPQTYRYGETAYAHT-- 728
Query: 719 LEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRRIDKVA 778
SPFLG + G S ++E NMYRAP++ HK+ TDFL++R+ + + IR +D +
Sbjct: 729 ------SPFLGILTPGQSIQAVENNMYRAPIYEHKIPETDFLVIRT-RQQYYIREVDALF 781
Query: 779 VVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLS 838
V Q+ PL EV P SK + + + V +YR F + R I +D++ FP+ S
Sbjct: 782 VAGQECPLYEVPGPNSKRANNFVRDFLQVFIYRLFWKS--RDTPRRIKMDDIKKAFPSHS 839
Query: 839 EAIIRKKLKECAFLRRDGNG-------KQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESM 891
E+ IRK+LK CA +R G W +K F +P+E ++R + PE C+Y SM
Sbjct: 840 ESSIRKRLKLCADFKRTGTNLYRTGMDSNWWVIKPDFRLPTEEEIRAMVSPEQCCAYFSM 899
Query: 892 QAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACT 951
A RLK G + L DE + L ++ E+++ PWN + ++
Sbjct: 900 IAAEQRLKDAGYGEKFLFTPQDDD-----DEDMQLK----MDDEVKVAPWNTTRAYI--- 947
Query: 952 NQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDAD 1011
Q + L++ G DP+G G GFSYVR K ++S +++A R TVTGTDAD
Sbjct: 948 -QAMKGKCLLQLAGPADPTGCGEGFSYVRVPNKPTISKE--EQEAQPKR---TVTGTDAD 1001
Query: 1012 LRRLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG-------------- 1057
LRRLS+ A+ +L KF VPEE I K +RW I ++R LS+E+A +G
Sbjct: 1002 LRRLSLNNAKALLRKFGVPEEEIKKLSRWEVIDVVRTLSTEKAKAGEEGMTKFSRGNRFS 1061
Query: 1058 -VQLQQQTRGKCQEIWDRQVQSLSA 1081
+ Q++ + +CQ I+D Q + LS+
Sbjct: 1062 IAEHQERYKEECQRIFDLQNRVLSS 1086
Score = 50.4 bits (119), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Query: 16 EDDEEEYEDVSGGNRLLGFMFGNVDYAGDLDVDYLDEDAKEHLAAVADKLGPS 68
+ DEE +D++ G + GF+FGN+D G L+ D LD DAK+HLA++ +LG S
Sbjct: 3 DSDEENEKDLASGLNITGFLFGNIDDNGQLEDDVLDPDAKQHLASLG-RLGLS 54
>gi|297804986|ref|XP_002870377.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297316213|gb|EFH46636.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 152
Score = 236 bits (603), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 110/150 (73%), Positives = 129/150 (86%)
Query: 601 LFYLGKELEDHKSLADQNVRPNSLIHLIRTKIHLLPRAQKLPGENKSLRPPGAFKKKSDL 660
+FY+GKELED KSLA QNV+PNSL+HLIR+K+H+ P AQ+LPGENKSLRP GA KKKSDL
Sbjct: 1 MFYMGKELEDEKSLAAQNVQPNSLVHLIRSKVHMWPWAQRLPGENKSLRPHGALKKKSDL 60
Query: 661 SVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLTLE 720
S KDGHVFLMEY EER L+L+NAG+GANLCTYYQKSSP DQ G L + ++ LGNV+ LE
Sbjct: 61 STKDGHVFLMEYYEERLLMLNNAGIGANLCTYYQKSSPEDQRGNWLHNQSDTLGNVMILE 120
Query: 721 PGDKSPFLGDIKAGCSQSSLETNMYRAPVF 750
PGDK PFLG+I GCSQS +ETNMY+AP+F
Sbjct: 121 PGDKCPFLGEIHVGCSQSFVETNMYKAPIF 150
>gi|260828418|ref|XP_002609160.1| hypothetical protein BRAFLDRAFT_126682 [Branchiostoma floridae]
gi|229294515|gb|EEN65170.1| hypothetical protein BRAFLDRAFT_126682 [Branchiostoma floridae]
Length = 2008
Score = 236 bits (603), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 196/684 (28%), Positives = 310/684 (45%), Gaps = 125/684 (18%)
Query: 521 FSKHSLQNRDMMEGSWLDNIIWEP--VDAVGKPKLI-LDLQDEQMLFEILDNKD------ 571
+S ++N +++ G+W D+IIW+P + + KPK++ LD DE ++F I D+ D
Sbjct: 550 YSLFPVENPELVYGNWEDDIIWDPQNMKEIPKPKVMKLDPNDENIIFGIPDDPDPLPDDT 609
Query: 572 ---DEHPLLHAGAMIITRS-AKPSD---------------------FKPAESVKLFYL-- 604
D+ + + ++ R KP + P S++ L
Sbjct: 610 PSKDKKEVRQSTLLLKKRGLTKPESDQSNVSHNEQKDPWNLSNDEYYDPKHSLQETTLRA 669
Query: 605 --GKELEDHKSLADQNVRPNSLIHLIRTKIHLLPRAQKLPGENKSLRPPGA--------- 653
G L H + A + +P H+ K+ L R + L PG
Sbjct: 670 SMGGNLVQHSTPAIELRQPFFPTHMGPIKLRQLHRPPLRKFSHGPLAQPGPHSVLPLLKQ 729
Query: 654 FKKKSDLSVKD------GHVFLM----------------EYCEERPLLLSNAGMGANLCT 691
KKK+ L ++ G VF M EY EE L+S GM +
Sbjct: 730 IKKKAKLREQERQASGGGEVFFMRTPQDLTGMDGEILLAEYSEEYAPLVSQVGMATKIKN 789
Query: 692 YYQKSSPGDQAGALLCSGNNCLGNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFT 751
+Y++ + G + SPFLG + G + + E N++RAP++
Sbjct: 790 FYKRKAGHTTGPPKFEYGETVYAHT--------SPFLGPLHPGQALQAFENNLFRAPIYQ 841
Query: 752 HKVATTDFLLVRSAKGKISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYR 811
HK+ TDFL++R+ + IR + V Q+ PL EV P SK + + + V +YR
Sbjct: 842 HKIPETDFLVIRT-RVHYYIREFQGLFCVGQECPLYEVPGPNSKRANNHVRDFLQVFIYR 900
Query: 812 EFSAAAKRGLLPCIGVDELSVQFPNLSEAIIRKKLKECAFLRRDGNG-KQV--------- 861
F + + I ++++ FP SE+ IRK+LK CA +R G K V
Sbjct: 901 LFWKSKDKPRR--IKMEDIRKAFPTHSESSIRKRLKLCADFKRTGRKYKNVVYVGMDSNW 958
Query: 862 WSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPD 921
W +K F +PSE ++R + PE C+Y SM RLK G + +L A P+
Sbjct: 959 WVLKPEFRLPSEEEIRAMVSPEQCCAYYSMLEAEQRLKDAGYGEKSLFA---------PE 1009
Query: 922 EAIALAAASHIERELQITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRA 981
E +I+ E++ PWN + F++ + L + GV DP+G G GFSY++
Sbjct: 1010 EENEEEFQRNIDDEVRTAPWNTTRAFISAM----KGKCLLAVMGVADPTGCGEGFSYIKV 1065
Query: 982 APKASVSSAMVKKKAAANRGGSTVTGTDADLRRLSMEAAREVLLKFNVPEEMIAKQTRWH 1041
K S K + TVTGTDADLRRLS++ A+++L KF V EE I K +RW
Sbjct: 1066 PNKPQSS----KDDNSPQPVKRTVTGTDADLRRLSLKNAKQLLRKFGVSEEEIKKLSRWE 1121
Query: 1042 RIAMIRKLSSEQAASG---------------VQLQQQTRGKCQEIWDRQVQSLSAAD--- 1083
I ++R +S+EQA SG + Q++ + +CQ I+D Q + LS+A+
Sbjct: 1122 VIDVVRTMSTEQARSGEAGMSKFARGTRFSVAEHQEKYKEECQRIFDLQNKVLSSAEVLS 1181
Query: 1084 DDEIGSDSEHSDLDSFAGDLENLL 1107
DE S ++ SD + ++EN+L
Sbjct: 1182 TDEESSSADDSDFEEMGKNIENML 1205
>gi|156405386|ref|XP_001640713.1| predicted protein [Nematostella vectensis]
gi|156227848|gb|EDO48650.1| predicted protein [Nematostella vectensis]
Length = 931
Score = 234 bits (598), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 156/463 (33%), Positives = 235/463 (50%), Gaps = 61/463 (13%)
Query: 643 GENKSLRPPGAFKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQA 702
GE +R P SDL+ DG + L+EYCEE P L+ GM + Y+ K PG
Sbjct: 221 GEMFFMRTP------SDLTGMDGKLVLLEYCEEHPALIMAVGMNTRIRNYH-KRKPGK-- 271
Query: 703 GALLCSGNNCLGNVLTLEP---GDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDF 759
++ + + EP SPFLG +K G S +LE N++RAP++ H++ TTDF
Sbjct: 272 -------DDSIPDYKFGEPVPVHQMSPFLGHLKPGESLQALENNLFRAPIYEHEMPTTDF 324
Query: 760 LLVRSAKGKISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAA--- 816
L++R G IR I + + QQ P EV P SK ++ + + + +YR F +
Sbjct: 325 LIIRMPSG-YYIREIGTIFTIGQQCPKFEVPGPNSKKANIHARDFLQIFIYRLFWKSQDD 383
Query: 817 AKRGLLPCIGVDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDL 876
+R I +D++ FP SE+ IRK+LK CA +R G+ W +K F +P+E ++
Sbjct: 384 PRR-----IKMDDIKKAFPAHSESSIRKRLKLCADFKRTGDCCNWWVLKSDFRLPAEEEM 438
Query: 877 RKLAYPEHVCSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIEREL 936
R L PE C+Y SM A RLK G + +L + + S I+ E+
Sbjct: 439 RALVSPEQACAYYSMLAAEQRLKDAGYGEKSLFSCDDDNDD---------SENSKIDDEI 489
Query: 937 QITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKA 996
++ PWN + F++ + L +TG DP+G G GFSY+R K M K
Sbjct: 490 RMAPWNTTRAFISAMRGKCQ----LAVTGSADPTGCGEGFSYIRVPNK-----PMANKVQ 540
Query: 997 AANRGGSTVTGTDADLRRLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAAS 1056
TVTGTDADLRRLS++ AR+VL F V +E I K +RW I ++R +S+E A S
Sbjct: 541 ECLYIMKTVTGTDADLRRLSLKQARQVLRDFGVSDEEIKKLSRWEVIDVVRTMSTEAAKS 600
Query: 1057 G---------------VQLQQQTRGKCQEIWDRQVQSLSAADD 1084
G + Q++ + +CQ I++ Q + LS+ ++
Sbjct: 601 GEEGMSKFARGSRFTIAEHQERYKEECQRIFELQNRVLSSKEE 643
>gi|351710553|gb|EHB13472.1| Transcription initiation factor TFIID subunit 1 [Heterocephalus
glaber]
Length = 1503
Score = 234 bits (596), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 167/494 (33%), Positives = 235/494 (47%), Gaps = 85/494 (17%)
Query: 643 GENKSLRPPGAFKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQA 702
GE +R P DL+ KDG + L EY EE L+ GM + YY K PG
Sbjct: 604 GEMFFMRTP------QDLTGKDGDLILAEYSEENGPLMMQVGMATKIKNYY-KRKPGKDP 656
Query: 703 GALLCSGNNCLGNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYR-----------APVFT 751
GA C G + SPFLG + G + E N++R AP++
Sbjct: 657 GAPDCK----YGETVYCH---TSPFLGSLHPGQLLQAFENNLFRAPRFLYVIFILAPIYL 709
Query: 752 HKVATTDFLLVRSAKGKISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYR 811
HK+ TDFL++R+ +G IR + + VV QQ PL EV P SK T+ R
Sbjct: 710 HKMPETDFLIIRTRQG-YYIRELVDIFVVGQQCPLFEVPGPNSKRANTH---------IR 759
Query: 812 EFSAAAKRGLLPCIGVDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIP 871
+F FP+ SE+ IRK+LK CA +R G W +K F +P
Sbjct: 760 DFLQKKA---------------FPSHSESSIRKRLKLCADFKRTGTDSNWWVLKSDFRLP 804
Query: 872 SEGDLRKLAYPEHVCSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASH 931
+E ++R + PE C+Y SM A RLK G + + A P+E
Sbjct: 805 TEEEIRAMVSPEQCCAYYSMIAAEQRLKDAGYGEKSFFA---------PEEENEEDFQMK 855
Query: 932 IERELQITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAM 991
I+ E++ PWN + F+A + LE+TGV DP+G G GFSYV+ K +
Sbjct: 856 IDDEVRTAPWNTTRAFIAAM----KGKCLLEVTGVADPTGCGEGFSYVKIPNKPTQQ--- 908
Query: 992 VKKKAAANRGGSTVTGTDADLRRLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSS 1051
K TVTGTDADLRRLS++ A+++L KF VPE+ I K +RW I MIR +S+
Sbjct: 909 -KDDKEPQPVKKTVTGTDADLRRLSLKNAKQLLRKFGVPEQEIKKLSRWEVIDMIRTMST 967
Query: 1052 EQAASG---------------VQLQQQTRGKCQEIWDRQVQSLSAAD---DDEIGSDSEH 1093
EQA SG + Q++ + +CQ I+D Q + LS+ + D S +E
Sbjct: 968 EQARSGEGPMSKFARGSRFSVAEHQERYKEECQRIFDLQNKVLSSTEVLSTDTDSSSAED 1027
Query: 1094 SDLDSFAGDLENLL 1107
SD + ++EN+L
Sbjct: 1028 SDFEEMGKNIENML 1041
>gi|170591598|ref|XP_001900557.1| Bromodomain containing protein [Brugia malayi]
gi|158592169|gb|EDP30771.1| Bromodomain containing protein [Brugia malayi]
Length = 1806
Score = 231 bits (590), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 205/714 (28%), Positives = 313/714 (43%), Gaps = 154/714 (21%)
Query: 524 HSL---QNRDMMEGSWLDNIIW--EPVDAVGKPKLI-LDLQDEQMLFEILDNK------- 570
HSL +N D++ W D+IIW E +D + +PKL+ LD D+ LF + ++K
Sbjct: 416 HSLFPMENYDLLYTKWEDDIIWDSENMDHIPEPKLLTLDYSDDPKLFGMPEDKATEDKVQ 475
Query: 571 ------------DDEHPLLHAGAMII----TRSAKPSDFKPAESVKL------------- 601
EH MI+ R + D + S+
Sbjct: 476 DGELPNPPKPFDRKEHQFTKKSKMILGQVQQRQKQEEDEQMESSIAQLTDKDPFNLSNDD 535
Query: 602 FYLGKELEDHKSLAD-----QNVRPNSLIHLIRTKIHLLP----RAQKLPGENKSLRPPG 652
+Y K +E S Q+ P IH HL P +LP + LR G
Sbjct: 536 YYRPKNVERTVSSVSGNSLIQHSLPAQNIHRTFFPTHLNPFKLRHYHRLPLSKRILRTTG 595
Query: 653 A-----------------FKKKS----------------DLSVKDGHVFLMEYCEERPLL 679
F++K DLS KDG + LMEY EE P L
Sbjct: 596 TRLVFVKTLTKLIKEKEEFREKQKAAEGGGEIFFMREVQDLSGKDGTLLLMEYSEEHPPL 655
Query: 680 LSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLTLEPGDKSPFLGDIKAGCSQSS 739
L+ GM + + YY++ G + G + SPFLG + G S
Sbjct: 656 LNQPGMASKIRNYYKRKV-GKETDPEYEFGETAFTHT--------SPFLGSLAPGQGLQS 706
Query: 740 LETNMYRAPVFTHKVATTDFLLVRSAKGKISIRRIDKVAVVAQQEPLMEVMSPGSKNLQT 799
LE N+YRAP++ H + DFLL+R+ +G IR + +V Q+ PL EV SP SK
Sbjct: 707 LENNLYRAPIYKHSSNSNDFLLIRTKQGYF-IRHCPNLFLVGQECPLYEVPSPNSKRATV 765
Query: 800 YSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLSEAIIRKKLKECAFLRRDGNG- 858
+ + +L +YR F A+ + + ++++ FP+ +E+ +RK+LK+C+ RR G G
Sbjct: 766 FVRDFLLAYIYRLFWASDQNPRR--LKMEDIKEAFPHYAESSVRKRLKQCSDFRRLGQGP 823
Query: 859 -KQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRLKHLGITQ--LTLPASISSA 915
+ W ++ F +PS+ ++ + PE C+ SM A RLK G + P + +
Sbjct: 824 DQNYWVLRSDFRLPSKEEVLAMVTPEMCCAQYSMLAAEQRLKDAGYGEKYFFTPENEDDS 883
Query: 916 MSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLG 975
Q+ IE E++ PWN + +++ + L+ TG+ DP+G G
Sbjct: 884 DDQV-----------TIEDEIKCAPWNTTRAYISSM----KGKCLLDQTGIADPTGCGEA 928
Query: 976 FSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLRRLSMEAAREVLLKFNVPEEMIA 1035
FSYVR + K + K+ N VTGT+ADLR+L ++ A+E+ + V EE I
Sbjct: 929 FSYVRVSAKPQKA-----KEEVTNVPKRLVTGTNADLRKLPLKEAKEICRDYGVREEEIN 983
Query: 1036 KQTRWHRIAMIRKLSSEQAA-----SGV-------------QLQQQTRGKCQEIWDRQVQ 1077
+RW I +IR LS++ A SG+ +Q++ + CQ +D Q Q
Sbjct: 984 SLSRWEIIDVIRTLSTQAAKARSDFSGMARFARGNIRFNFADMQEKYKKFCQRTFDLQNQ 1043
Query: 1078 SLSAAD---DDEIGSDSEHSDLDSFAGDLENLLDAE------------EFEEEE 1116
+LS D DE GS E SD + A LE++LD EFE+EE
Sbjct: 1044 TLSNTDLLSTDE-GSSGEDSDNEELATKLESMLDVNKGKSFTFDKKKLEFEQEE 1096
>gi|358332359|dbj|GAA51035.1| transcription initiation factor TFIID subunit 1 [Clonorchis sinensis]
Length = 2569
Score = 231 bits (590), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 155/452 (34%), Positives = 227/452 (50%), Gaps = 40/452 (8%)
Query: 654 FKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCL 713
+ +DLS DG V L E+ EE P L++ GM + + YY+ P D+A + ++
Sbjct: 1006 MRTPADLSGTDGDVVLCEFSEEYPPLMTQIGMASRIINYYRPLYPRDRALSPAPHASSDP 1065
Query: 714 GNV----LTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKI 769
N+ L G SPFLG I+ G +LE NMYRAP++ H + TDFLL+R+ G I
Sbjct: 1066 PNLPYGSLVYVTGTDSPFLGVIRPGGCLQTLENNMYRAPIYPHTMPNTDFLLIRNRNG-I 1124
Query: 770 SIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREF---SAAAKRGLLPCIG 826
SIRRI + V Q+ PLMEV P SK + + + V + R F + KR I
Sbjct: 1125 SIRRIKDIFTVGQEIPLMEVPGPNSKRANNFVRDFLQVFILRLFLHSTDEPKR-----IK 1179
Query: 827 VDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVC 886
++E+ FPN SE+ +RK+LK CA RR G+ W ++ + +PSE ++R L PE C
Sbjct: 1180 IEEIRKAFPNHSESSVRKRLKVCADFRRTGSDASWWVLRNDYRLPSEEEVRYLVTPEDCC 1239
Query: 887 SYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSN 946
++ SM A RLK G + +L + +E +E E++ PWN +
Sbjct: 1240 AHYSMLAAELRLKDAGYGEKSL-----FVFDENQEEEEDKEGQPKMEDEVRAAPWNTTRA 1294
Query: 947 FVACTNQDRENIERLEITGVGDPSGRGLGFSYVR--AAPKASVSSAMVKKKAAANRGGST 1004
++A + LE+ G DP+G G FSY + A P A A + +G T
Sbjct: 1295 YLAS----QRGGCFLELHGAADPTGCGEAFSYSKTSAKPGALFRQAGGEVARGLLKGKRT 1350
Query: 1005 VTGTDADLRRLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG------- 1057
VTGTDADLR+L + AR +L F + E + RW I M+R S+E+A G
Sbjct: 1351 VTGTDADLRKLHLRDARALLRSFGISEADLKTFKRWEIIDMVRFASTERAKQGEEESSAK 1410
Query: 1058 ------VQLQQQTRG---KCQEIWDRQVQSLS 1080
+ + +Q R +CQ I+D Q + LS
Sbjct: 1411 FARGNRLSMGEQVRCYREECQRIFDLQNRVLS 1442
>gi|393908269|gb|EJD74987.1| bromodomain containing protein [Loa loa]
Length = 1818
Score = 231 bits (588), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 204/714 (28%), Positives = 312/714 (43%), Gaps = 154/714 (21%)
Query: 524 HSL---QNRDMMEGSWLDNIIW--EPVDAVGKPKLI-LDLQDEQMLFEILDNK------- 570
HSL +N D++ W D+IIW E +D + +PKL+ LD D+ LF + ++K
Sbjct: 417 HSLFPMENYDLLYTRWEDDIIWDSENMDHIPEPKLLTLDYSDDPKLFGMPEDKATEDKIQ 476
Query: 571 ------------DDEHPLLHAGAMII----TRSAKPSDFKPAESVKL------------- 601
EH MI+ R + D + S+
Sbjct: 477 DGELPNPPKPFDRKEHQFTKKSKMILGQVQQRQKQEEDEQMESSIAQLTDKDPFNLSNDD 536
Query: 602 FYLGKELEDHKSLAD-----QNVRPNSLIHLIRTKIHLLP----RAQKLPGENKSLRPPG 652
+Y K +E S Q+ P IH HL P +LP + LR G
Sbjct: 537 YYRPKNVERTVSSVSGSSLIQHSLPAQNIHRTFFPTHLNPFKLRHYHRLPLSKRILRTTG 596
Query: 653 A-----------------FKKKS----------------DLSVKDGHVFLMEYCEERPLL 679
F++K DLS KD + LMEY EE P L
Sbjct: 597 TRLVSVKTLTKLIKEKEEFREKQKAAEGGGEIFFMREVQDLSGKDSTLLLMEYSEEHPPL 656
Query: 680 LSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLTLEPGDKSPFLGDIKAGCSQSS 739
L+ GM + + YY++ G + G + SPFLG + G S
Sbjct: 657 LNQPGMASKIRNYYKRKV-GKETDPEYEFGETAFTHT--------SPFLGSLAPGQGLQS 707
Query: 740 LETNMYRAPVFTHKVATTDFLLVRSAKGKISIRRIDKVAVVAQQEPLMEVMSPGSKNLQT 799
LE N+YRAP++ H DFLL+R+ +G IR + +V Q+ PL EV SP SK
Sbjct: 708 LENNLYRAPIYKHSSNPNDFLLIRTKQGYF-IRHCPTLFLVGQECPLYEVPSPNSKRATV 766
Query: 800 YSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLSEAIIRKKLKECAFLRRDGNG- 858
+ + +L +YR F A+ + + ++++ FP+ +E+ +RK+LK+C+ +R G G
Sbjct: 767 FVRDFLLAYIYRLFWASGQNPRR--LKMEDIKEAFPHYAESSVRKRLKQCSDFKRLGQGP 824
Query: 859 -KQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRLKHLGITQ--LTLPASISSA 915
+ W ++ F +PS+ ++ + PE C+ SM A RLK G + P + +
Sbjct: 825 DQNYWVLRSDFRLPSKEEVLAMVTPEMCCAQYSMLAAEQRLKDAGYGEKYFFTPENEDDS 884
Query: 916 MSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLG 975
Q+ IE E++ PWN + +++ + L+ TG+ DP+G G G
Sbjct: 885 DDQV-----------TIEDEIKCAPWNTTRAYISSM----KGKCLLDQTGIADPTGCGEG 929
Query: 976 FSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLRRLSMEAAREVLLKFNVPEEMIA 1035
FSYVR + K + K+ N VTGT+ADLR+L ++ A+E+ + V EE I
Sbjct: 930 FSYVRVSAKPQKA-----KEEVTNVPKRLVTGTNADLRKLPLKEAKEICRDYGVREEEIN 984
Query: 1036 KQTRWHRIAMIRKLSSEQAA-----SGV-------------QLQQQTRGKCQEIWDRQVQ 1077
+RW I +IR LS++ A SG+ +Q++ + CQ +D Q Q
Sbjct: 985 SLSRWEIIDVIRTLSTQAAKARSDFSGMARFARGNIRFNFADMQEKYKKFCQRTFDLQNQ 1044
Query: 1078 SLSAAD---DDEIGSDSEHSDLDSFAGDLENLLDAE------------EFEEEE 1116
+LS D DE GS E SD + A LE++LD EFE+EE
Sbjct: 1045 TLSNTDILSTDE-GSSGEDSDNEELATKLESMLDVNKGKSFTLDKKKLEFEQEE 1097
>gi|312072172|ref|XP_003138944.1| bromodomain containing protein [Loa loa]
Length = 1297
Score = 230 bits (587), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 204/714 (28%), Positives = 312/714 (43%), Gaps = 154/714 (21%)
Query: 524 HSL---QNRDMMEGSWLDNIIW--EPVDAVGKPKLI-LDLQDEQMLFEILDNK------- 570
HSL +N D++ W D+IIW E +D + +PKL+ LD D+ LF + ++K
Sbjct: 417 HSLFPMENYDLLYTRWEDDIIWDSENMDHIPEPKLLTLDYSDDPKLFGMPEDKATEDKIQ 476
Query: 571 ------------DDEHPLLHAGAMII----TRSAKPSDFKPAESVKL------------- 601
EH MI+ R + D + S+
Sbjct: 477 DGELPNPPKPFDRKEHQFTKKSKMILGQVQQRQKQEEDEQMESSIAQLTDKDPFNLSNDD 536
Query: 602 FYLGKELEDHKSLAD-----QNVRPNSLIHLIRTKIHLLP----RAQKLPGENKSLRPPG 652
+Y K +E S Q+ P IH HL P +LP + LR G
Sbjct: 537 YYRPKNVERTVSSVSGSSLIQHSLPAQNIHRTFFPTHLNPFKLRHYHRLPLSKRILRTTG 596
Query: 653 A-----------------FKKKS----------------DLSVKDGHVFLMEYCEERPLL 679
F++K DLS KD + LMEY EE P L
Sbjct: 597 TRLVSVKTLTKLIKEKEEFREKQKAAEGGGEIFFMREVQDLSGKDSTLLLMEYSEEHPPL 656
Query: 680 LSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLTLEPGDKSPFLGDIKAGCSQSS 739
L+ GM + + YY++ G + G + SPFLG + G S
Sbjct: 657 LNQPGMASKIRNYYKRKV-GKETDPEYEFGETAFTHT--------SPFLGSLAPGQGLQS 707
Query: 740 LETNMYRAPVFTHKVATTDFLLVRSAKGKISIRRIDKVAVVAQQEPLMEVMSPGSKNLQT 799
LE N+YRAP++ H DFLL+R+ +G IR + +V Q+ PL EV SP SK
Sbjct: 708 LENNLYRAPIYKHSSNPNDFLLIRTKQGYF-IRHCPTLFLVGQECPLYEVPSPNSKRATV 766
Query: 800 YSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLSEAIIRKKLKECAFLRRDGNG- 858
+ + +L +YR F A+ + + ++++ FP+ +E+ +RK+LK+C+ +R G G
Sbjct: 767 FVRDFLLAYIYRLFWASGQNPRR--LKMEDIKEAFPHYAESSVRKRLKQCSDFKRLGQGP 824
Query: 859 -KQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRLKHLGITQ--LTLPASISSA 915
+ W ++ F +PS+ ++ + PE C+ SM A RLK G + P + +
Sbjct: 825 DQNYWVLRSDFRLPSKEEVLAMVTPEMCCAQYSMLAAEQRLKDAGYGEKYFFTPENEDDS 884
Query: 916 MSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLG 975
Q+ IE E++ PWN + +++ + L+ TG+ DP+G G G
Sbjct: 885 DDQV-----------TIEDEIKCAPWNTTRAYISSM----KGKCLLDQTGIADPTGCGEG 929
Query: 976 FSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLRRLSMEAAREVLLKFNVPEEMIA 1035
FSYVR + K + K+ N VTGT+ADLR+L ++ A+E+ + V EE I
Sbjct: 930 FSYVRVSAKPQKA-----KEEVTNVPKRLVTGTNADLRKLPLKEAKEICRDYGVREEEIN 984
Query: 1036 KQTRWHRIAMIRKLSSEQAA-----SGV-------------QLQQQTRGKCQEIWDRQVQ 1077
+RW I +IR LS++ A SG+ +Q++ + CQ +D Q Q
Sbjct: 985 SLSRWEIIDVIRTLSTQAAKARSDFSGMARFARGNIRFNFADMQEKYKKFCQRTFDLQNQ 1044
Query: 1078 SLSAAD---DDEIGSDSEHSDLDSFAGDLENLLDAE------------EFEEEE 1116
+LS D DE GS E SD + A LE++LD EFE+EE
Sbjct: 1045 TLSNTDILSTDE-GSSGEDSDNEELATKLESMLDVNKGKSFTLDKKKLEFEQEE 1097
>gi|324499978|gb|ADY40004.1| Transcription initiation factor TFIID subunit 1 [Ascaris suum]
Length = 1810
Score = 230 bits (587), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 158/476 (33%), Positives = 243/476 (51%), Gaps = 58/476 (12%)
Query: 659 DLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLT 718
DLS KDG + LMEY EE P LL+ GM + + YY++ G +A G +
Sbjct: 638 DLSGKDGTLLLMEYSEEHPPLLNQPGMASKIRNYYKRKV-GKEADPEYDFGETAFTHT-- 694
Query: 719 LEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRRIDKVA 778
SPFLG + G S SLE N+YRAP++ H TDFLL+R+ +G IR +
Sbjct: 695 ------SPFLGTLAPGQSLQSLENNLYRAPIYRHLPNRTDFLLIRTKQG-FFIRMCPTLF 747
Query: 779 VVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLS 838
+V Q+ PL EV SP SK + + +L +YR F A+ + + ++++ FP+ +
Sbjct: 748 LVGQECPLYEVPSPNSKRATVFVRDFLLAYIYRLFWASDQNPRR--LKMEDIKAAFPHYA 805
Query: 839 EAIIRKKLKECAFLRRDGNG--KQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLY 896
E+ +RK+LK+C+ +R G G + W ++ F +PS+ ++ + PE C+ SM A
Sbjct: 806 ESSVRKRLKQCSDFKRLGQGPDQNYWVLRSDFRLPSKEEVLAMVTPEMCCAQYSMLAAEQ 865
Query: 897 RLKHLGITQ--LTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQD 954
RLK G + P + + Q+ IE E++ PWN + +++
Sbjct: 866 RLKDAGYGEKYFFTPENEDDSDDQV-----------TIEDEIKCAPWNTTRAYISSM--- 911
Query: 955 RENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLRR 1014
+ L+ TG+ DP+G G GFSYVR + K + K+ N VTGT+ADLR+
Sbjct: 912 -KGKCLLDQTGIADPTGCGEGFSYVRVSAKPQKA-----KEEVPNVPKRLVTGTNADLRK 965
Query: 1015 LSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAA-----SGV----------- 1058
L ++ A+E+ + V EE I +RW I +IR LS++ A SG+
Sbjct: 966 LPLKEAKEICRDYGVREEEINSLSRWEIIDVIRTLSTQAAKARSDFSGMARFARGNIRFN 1025
Query: 1059 --QLQQQTRGKCQEIWDRQVQSLSAADD---DEIGSDSEHSDLDSFAGDLENLLDA 1109
+Q++ + CQ I+D Q Q+LS D+ DE GS E SD + A LE++L A
Sbjct: 1026 FADMQEKYKKFCQRIFDLQNQTLSNPDELSTDE-GSSGEDSDNEELATKLESMLAA 1080
>gi|301119473|ref|XP_002907464.1| transcription initiation factor TFIID subunit 1, putative
[Phytophthora infestans T30-4]
gi|262105976|gb|EEY64028.1| transcription initiation factor TFIID subunit 1, putative
[Phytophthora infestans T30-4]
Length = 1567
Score = 227 bits (578), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 212/746 (28%), Positives = 322/746 (43%), Gaps = 180/746 (24%)
Query: 528 NRDMMEGSWLDNIIWEPVDAVGKPKLILDLQDEQMLFEILDNKDDEHPL------LHAGA 581
N+ + + SW+ I W+ + + KL+LD D +++ + + +D L L A
Sbjct: 322 NKQLQDDSWVTAIGWKSTQDMPESKLVLDDNDASLIYSVPEMEDVRPTLRIPERKLGAAE 381
Query: 582 MIITRSAKP------------SDFKPAESVKLFYLGKELEDHKSLADQNVRPNSLIH--- 626
+ + K + + E LG E KS + V+ +H
Sbjct: 382 QRLAQLDKQRIEKKQRIDEVMGNLEFGEETAEGRLGTEGSGKKSKDTRVVKNIGYVHHSL 441
Query: 627 -----------LIRTKIHLLPRAQKLPGENKSLR----PPGA--------------FKKK 657
L +TK+ R + N+ L PPGA KK
Sbjct: 442 PAMKLSLTKPELPKTKLRDFHRPRGKFKINERLEFLPPPPGAAKMAPQEESAMVTQIKKS 501
Query: 658 SDLS-VKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNC---- 712
SDL+ G + L+EY E+RP +LSN GM + + Y++ P D + L G
Sbjct: 502 SDLNPTAGGKLILIEYTEQRPPMLSNPGMASRILHYWR--PPEDTSAGLGILGKKKARKT 559
Query: 713 --------LGNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHK-----VATTD- 758
+G V+TL D+SPF+GDI G +SL + +Y+ P+F HK A+ D
Sbjct: 560 RPKPPDMKMGQVITLGDHDESPFVGDIPPGRVVTSLNSKLYKVPLFPHKPTIPFAASPDA 619
Query: 759 --------FLLVRS-AKGK-----------------ISIRRIDKVAVVAQQEPLMEVMSP 792
FL+ RS KGK + I + +V V Q EP +EV +P
Sbjct: 620 RERNNSDIFLMCRSITKGKKGAAADKSGGLGVPKTTVYIMELPEVFVAGQIEPQIEVPAP 679
Query: 793 GSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLSEAIIRKKLKECAFL 852
S++ + M ++ R F A+ L +++++ FPN S IRK++KE A
Sbjct: 680 NSRSANEFIRPYMSFHILRLFKKASDGERLK---IEDIARAFPNQSGTAIRKRMKEVATF 736
Query: 853 RRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRLKHLGITQLTLPASI 912
R GN W K + SE ++R PE VC YESM +G RL +G+T+L P+ +
Sbjct: 737 ERGGNDSGWWKKKPVSQLQSEEEIRASIPPESVCLYESMMSGHRRLLDIGLTKLFTPSGV 796
Query: 913 SSAMSQL----------------------------------PDEAIA-----LAAASHIE 933
+ A++ L D + + A +I
Sbjct: 797 NGAINHLIRRLELRKNALSTRLVPANLERRAREKTQAELWKKDPVVRKLEKDIQVARYIN 856
Query: 934 RELQITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVR------------- 980
+LQ+TPWNL++N+V C Q + + L++ G+GDP+GRG GFS+VR
Sbjct: 857 EQLQLTPWNLTNNYVECHLQGKGS-GMLQLGGIGDPTGRGEGFSFVRVPQSRAKKKDGEE 915
Query: 981 -AAPKASVSSAMVKKKAAANRGGSTVTGTDADLRRLSMEAAREVLLKFNVPEEMIAKQTR 1039
AAP A S + + AA + + VTGT ADLR+L M+ A +VL + + I K R
Sbjct: 916 DAAPTA--ESKISAETAAVQKAVAAVTGTTADLRKLKMKEAGDVLRNLGLADADIKKLRR 973
Query: 1040 WHRIAMIRKLSSEQAASGV----------------QLQQQTRGKCQEIWDRQVQSLSA-- 1081
W RI M+R+LSS A GV QQ+ R KC I++RQ+ LS+
Sbjct: 974 WDRIHMVRELSSRATAHGVAGSLSKFARGARKSLSAQQQEYRKKCDVIYERQMDVLSSTK 1033
Query: 1082 ---ADDDEIGSDSEHSDLDSFAGDLE 1104
+ D+E D E LD D+E
Sbjct: 1034 TTFSSDEESDGDDE---LDELGADVE 1056
>gi|348690827|gb|EGZ30641.1| hypothetical protein PHYSODRAFT_553606 [Phytophthora sojae]
Length = 1585
Score = 226 bits (576), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 207/678 (30%), Positives = 301/678 (44%), Gaps = 165/678 (24%)
Query: 625 IHLIRTKIHLLPRAQKLPGENKSLRPPGA--------------FKKKSDLS-VKDGHVFL 669
H R K + R Q LP PPGA KK SDL+ G + L
Sbjct: 482 FHRPRGKFKINERLQFLPP------PPGAAKLAPQEESAMVTQIKKSSDLNPTAGGKLIL 535
Query: 670 MEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNC------------LGNVL 717
+EY E+ P +LSN GM A + Y++ P D + L G +G V+
Sbjct: 536 IEYTEQHPPMLSNPGMAARILHYWR--PPEDTSAGLGILGKKKARKTRPKPPDMKMGQVI 593
Query: 718 TLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHK-----VATTD---------FLLVR 763
TL D+SPF+GDI G +SL + +Y+ P+F HK A+ D FLL R
Sbjct: 594 TLGDHDESPFVGDIPPGRVVTSLNSKLYKVPIFPHKPTVPFAASPDSRERNNSDIFLLCR 653
Query: 764 S-AKGK-----------------ISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRM 805
S KGK + I + +V V Q EP +EV +P S++ + M
Sbjct: 654 SVTKGKKGAAGDKSGGLGTPKTTVFIMELPEVFVAGQIEPQIEVPAPNSRSANEFIRPYM 713
Query: 806 LVNVYREFSAAAKRGLLPCIGVDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMK 865
++ R F A+ L +++++ FPN S IRK++KE A R GN W K
Sbjct: 714 SFHILRLFKKASDGERL---KIEDIARAFPNQSGTAIRKRMKEVATFERGGNDSGWWKKK 770
Query: 866 RTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRLKHLGITQLTLPASISSAMSQL------ 919
+ SE ++R PE VC YESM +G RL +G+T+L P+ ++ A++ L
Sbjct: 771 PASQLQSEEEIRASIPPESVCLYESMMSGHRRLLDIGLTKLFTPSGVNGAINHLIRRLEL 830
Query: 920 ----------------------------PDEAIA-----LAAASHIERELQITPWNLSSN 946
D + + A +I +LQ+TPWNL++N
Sbjct: 831 RKNTLSTRLVPANLERRARERAQADLWKKDPVVRKLETDIQVARYINEQLQLTPWNLTNN 890
Query: 947 FVACTNQDRENIERLEITGVGDPSGRGLGFSYVR--------------AAPKASVSSAMV 992
+V C Q + + L++ G+GDP+GRG GFS+VR AP A S +
Sbjct: 891 YVECHLQGKGS-GMLQLGGIGDPTGRGEGFSFVRVPQSRAKKKDGEDDVAPTA--ESKIS 947
Query: 993 KKKAAANRGGSTVTGTDADLRRLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSE 1052
+ AA + + VTGT ADLR+L M+ A +VL + + I K RW RI M+R+LSS
Sbjct: 948 AETAAVQKAVAAVTGTTADLRKLKMKEAGDVLRNLGLADADIKKLRRWDRIHMVRELSSR 1007
Query: 1053 QAASGV----------------QLQQQTRGKCQEIWDRQVQSLSA-----ADDDEIGSDS 1091
A GV QQ+ R KC I++RQ+ LS+ + D+E D
Sbjct: 1008 ATAHGVAGSLSKFARGARKSLSAQQQEYRKKCDVIYERQMDVLSSTKTTFSSDEESDGDD 1067
Query: 1092 EHSDLDSFAGDLENLLDAEEFEEEESNYDTKHDKVEGVKGLKMRRRPIQVQAEEEIEDEA 1151
E LD D+E A+ ++ K+ G GL R +V AE E
Sbjct: 1068 E---LDELGADVE----ADILGGTDTKRGPKNLFRSGGGGLN---RSKEVLAERE----- 1112
Query: 1152 AEAAELCRLL--MDDDEA 1167
+A EL RL+ M++D+
Sbjct: 1113 -DAVELRRLMEEMNEDQG 1129
>gi|256052632|ref|XP_002569866.1| transcription initiation factor tfiid [Schistosoma mansoni]
Length = 2241
Score = 226 bits (575), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 155/478 (32%), Positives = 235/478 (49%), Gaps = 67/478 (14%)
Query: 654 FKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQA----------- 702
+ SDLS DG + L E+ EE P LL+ GM + YY+ P D++
Sbjct: 903 MRTPSDLSGADGEIVLFEFSEEYPPLLAQVGMATRIINYYRPLVPRDRSLSPSPHAYSEP 962
Query: 703 -----GALLCSGNNCLGNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATT 757
G+L+ G G SPFLG I+ G ++E +M+RAP++ H VA+T
Sbjct: 963 PELPYGSLVYVG------------GSDSPFLGVIRPGGCLQTVENSMFRAPIYPHTVAST 1010
Query: 758 DFLLVRSAKGKISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAA 817
DFL++R+ G ISIRR+ V Q+ PLMEV P SK + + + V + R F +
Sbjct: 1011 DFLMIRNRNG-ISIRRVPNAFTVGQEVPLMEVPGPNSKRANNFVRDFLQVFILRLFLRST 1069
Query: 818 ---KRGLLPCIGVDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEG 874
KR I ++E+ FPN SE+ +RK+LK CA +R G+ W ++ + +PSE
Sbjct: 1070 DEPKR-----IKMEEIRKAFPNHSESSVRKRLKVCADFKRTGSDASWWVLRSDYRLPSEE 1124
Query: 875 DLRKLAYPEHVCSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIER 934
++R L PE C++ SM A RLK G + L + + + D+ +E
Sbjct: 1125 EVRYLVSPEDCCAHYSMLAAELRLKDAGYGEKYLFVLDENQVEEEEDK----EGQPKMED 1180
Query: 935 ELQITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVR--AAPKASVSSAMV 992
E++ PWN + ++A + LE+ G DP+G G FSY + A P A A
Sbjct: 1181 EVRAAPWNTTRAYLAS----QRGGCFLELHGAADPTGCGEAFSYSKTSAKPGALFRQAGG 1236
Query: 993 KKKAAANRGGSTVTGTDADLRRLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSE 1052
+ +G TVTGTDADLR+L + AR +L F + E + RW I M+R S+E
Sbjct: 1237 EVARGLLKGKRTVTGTDADLRKLHLRDARALLRSFGISEADLKTFKRWEIIDMVRFTSTE 1296
Query: 1053 QAASG-------------VQLQQQTRG---KCQEIWDRQVQSLSAAD----DDEIGSD 1090
+A G + + +Q R +CQ I+D Q + LS ++ D+E+ S+
Sbjct: 1297 RAKQGEEEGSAKFARGNRLSISEQIRCYKEECQRIFDLQNRVLSNSELLSSDEEVSSE 1354
>gi|360042701|emb|CCD78111.1| putative transcription initiation factor tfiid [Schistosoma mansoni]
Length = 2173
Score = 226 bits (575), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 155/478 (32%), Positives = 235/478 (49%), Gaps = 67/478 (14%)
Query: 654 FKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQA----------- 702
+ SDLS DG + L E+ EE P LL+ GM + YY+ P D++
Sbjct: 903 MRTPSDLSGADGEIVLFEFSEEYPPLLAQVGMATRIINYYRPLVPRDRSLSPSPHAYSEP 962
Query: 703 -----GALLCSGNNCLGNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATT 757
G+L+ G G SPFLG I+ G ++E +M+RAP++ H VA+T
Sbjct: 963 PELPYGSLVYVG------------GSDSPFLGVIRPGGCLQTVENSMFRAPIYPHTVAST 1010
Query: 758 DFLLVRSAKGKISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAA 817
DFL++R+ G ISIRR+ V Q+ PLMEV P SK + + + V + R F +
Sbjct: 1011 DFLMIRNRNG-ISIRRVPNAFTVGQEVPLMEVPGPNSKRANNFVRDFLQVFILRLFLRST 1069
Query: 818 ---KRGLLPCIGVDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEG 874
KR I ++E+ FPN SE+ +RK+LK CA +R G+ W ++ + +PSE
Sbjct: 1070 DEPKR-----IKMEEIRKAFPNHSESSVRKRLKVCADFKRTGSDASWWVLRSDYRLPSEE 1124
Query: 875 DLRKLAYPEHVCSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIER 934
++R L PE C++ SM A RLK G + L + + + D+ +E
Sbjct: 1125 EVRYLVSPEDCCAHYSMLAAELRLKDAGYGEKYLFVLDENQVEEEEDK----EGQPKMED 1180
Query: 935 ELQITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVR--AAPKASVSSAMV 992
E++ PWN + ++A + LE+ G DP+G G FSY + A P A A
Sbjct: 1181 EVRAAPWNTTRAYLAS----QRGGCFLELHGAADPTGCGEAFSYSKTSAKPGALFRQAGG 1236
Query: 993 KKKAAANRGGSTVTGTDADLRRLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSE 1052
+ +G TVTGTDADLR+L + AR +L F + E + RW I M+R S+E
Sbjct: 1237 EVARGLLKGKRTVTGTDADLRKLHLRDARALLRSFGISEADLKTFKRWEIIDMVRFTSTE 1296
Query: 1053 QAASG-------------VQLQQQTRG---KCQEIWDRQVQSLSAAD----DDEIGSD 1090
+A G + + +Q R +CQ I+D Q + LS ++ D+E+ S+
Sbjct: 1297 RAKQGEEEGSAKFARGNRLSISEQIRCYKEECQRIFDLQNRVLSNSELLSSDEEVSSE 1354
>gi|325192829|emb|CCA27230.1| transcription initiation factor TFIID subunit 1 puta [Albugo
laibachii Nc14]
Length = 1578
Score = 226 bits (575), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 204/724 (28%), Positives = 307/724 (42%), Gaps = 183/724 (25%)
Query: 528 NRDMMEGSWLDNIIWEPVDAVGKPKLILDLQDEQMLFEILDNKDDEHPLLHA-----GAM 582
N+++ G+WLD I W + + KL+LD D ++ + + +D P L GA
Sbjct: 321 NQELESGTWLDAIGWNCTQEMPETKLVLDDNDTNIILSVPET-EDIRPTLRIPERKLGAA 379
Query: 583 -----IITRSAKPSDFKPAESVKLFYLGKELEDHKSLADQNVRPNSLIHLIRTKIHL--- 634
+ + + + E + G+E + + D + N +I+ H+
Sbjct: 380 EQRLEQLDKQRREKKQRIDEVMGNLEFGEETAEGRLGTDGTGKKNKETRIIKNIGHVHHS 439
Query: 635 LPRAQKLPGENKSL---------RPPGAFK------------------------------ 655
LP A KL L RP G FK
Sbjct: 440 LP-AIKLTMTKPELPKSKLREFHRPRGKFKINERLLFTRSPKVAMPQKIEKNAMVVTQIK 498
Query: 656 KKSDLS-VKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNC-- 712
K SDL+ G + ++EY E+ P +LSN GM + + Y++ P D +L +
Sbjct: 499 KSSDLNPTAGGKLIMVEYTEQNPPILSNPGMASRVLHYWR--PPEDDDDHVLGKKKSKKA 556
Query: 713 --------LGNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVAT-------- 756
+G V+TL D+SPF+GDI G +SL + +Y+ P+F HK
Sbjct: 557 KPKPPEMPMGQVITLGDHDESPFVGDIPPGRVVTSLNSKLYKIPIFRHKAVVPFATNASA 616
Query: 757 ------TDFLLVRS------------------AKGKISIRRIDKVAVVAQQEPLMEVMSP 792
FLL RS AK I I + ++ V Q EP +EV +P
Sbjct: 617 REAGNYVLFLLCRSISKHKKGSSMDPSSSGIGAKSTIYIMELPELYVAGQIEPQLEVPAP 676
Query: 793 GSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLSEAIIRKKLKECAFL 852
S++ + M ++ R F A+ L +++++ FPN S IRK++KE A
Sbjct: 677 NSRSANDFIRPYMSFHILRLFKKASDGERLK---IEDVARAFPNQSGTAIRKRMKEVATF 733
Query: 853 RRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRLKHLGITQLTLPASI 912
R GN W K + SE ++R PE+VC YESM AG RL +G+T+L P+ +
Sbjct: 734 ERGGNDSGWWKKKAANQLTSEEEIRSSIPPENVCLYESMMAGHRRLSDIGLTKLFSPSGV 793
Query: 913 SSAMS------QLPDEAIA-----------------------------------LAAASH 931
+SA++ +L +A+ + A +
Sbjct: 794 NSAINLMLKRLELRRQALTTKFIDSLVVDRVSAREKAQKELWQSDPMIRKLEKDIQIARY 853
Query: 932 IERELQITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAM 991
I +LQITPWNL++N+V C Q + + L++ G+GDP+GRG GFS+VR V +
Sbjct: 854 INEQLQITPWNLTNNYVECHLQGKGS-GMLQLGGIGDPTGRGEGFSFVR------VPQSR 906
Query: 992 VKKKAA--ANRGGSTV---------------TGTDADLRRLSMEAAREVLLKFNVPEEMI 1034
KKK N G T TGT ADLR+L M+ A +VL + E I
Sbjct: 907 AKKKDGEDGNDTGGTAPSADSAAVQKAVAAVTGTTADLRKLKMKEAGDVLRNLGLAEADI 966
Query: 1035 AKQTRWHRIAMIRKLSSEQAASGV----------------QLQQQTRGKCQEIWDRQVQS 1078
K RW RI M+R+LSS A GV QQ+ R KC I++RQ+
Sbjct: 967 KKLRRWDRIHMVRELSSRATAHGVAGTLSKFARGARKSLSAQQQEYRKKCDVIYERQMDV 1026
Query: 1079 LSAA 1082
LSA+
Sbjct: 1027 LSAS 1030
>gi|402591283|gb|EJW85213.1| bromodomain containing protein [Wuchereria bancrofti]
Length = 1390
Score = 225 bits (574), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 159/495 (32%), Positives = 245/495 (49%), Gaps = 70/495 (14%)
Query: 659 DLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLT 718
DLS KDG + LMEY EE P LL+ GM + + YY++ G + G +
Sbjct: 221 DLSGKDGTLLLMEYSEEHPPLLNQPGMASKIRNYYKRKV-GKETDPEYEFGETAFTHT-- 277
Query: 719 LEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRRIDKVA 778
SPFLG + G SLE N+YRAP++ H + DFLL+R+ +G IR +
Sbjct: 278 ------SPFLGSLAPGQGLQSLENNLYRAPIYKHSSNSNDFLLIRTKQGYF-IRHCPNLF 330
Query: 779 VVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLS 838
+V Q+ PL EV SP SK + + +L +YR F A+ + + ++++ FP+ +
Sbjct: 331 LVGQECPLYEVPSPNSKRATVFVRDFLLAYIYRLFWASDQNPRR--LKMEDIKEAFPHYA 388
Query: 839 EAIIRKKLKECAFLRRDGNG--KQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLY 896
E+ +RK+LK+C+ +R G G + W ++ F +PS+ ++ + PE C+ SM A
Sbjct: 389 ESSVRKRLKQCSDFKRLGQGPDQNYWVLRSDFRLPSKEEVLAMVTPEMCCAQYSMLAAEQ 448
Query: 897 RLKHLGITQ--LTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQD 954
RLK G + P + + Q+ IE E++ PWN + +++
Sbjct: 449 RLKDAGYGEKYFFTPENEDDSDDQVT-----------IEDEIKCAPWNTTRAYISSM--- 494
Query: 955 RENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLRR 1014
+ L+ TG+ DP+G G GFSYVR + K + K+ N VTGT+ADLR+
Sbjct: 495 -KGKCLLDQTGIADPTGCGEGFSYVRVSAKPQKA-----KEEVTNVPKRLVTGTNADLRK 548
Query: 1015 LSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAA-----SGV----------- 1058
L ++ A+E+ + V EE I +RW I +IR LS++ A SG+
Sbjct: 549 LPLKEAKEICRDYGVREEEINSLSRWEIIDVIRTLSTQAAKARSDFSGMARFARGNIRFN 608
Query: 1059 --QLQQQTRGKCQEIWDRQVQSLSAAD---DDEIGSDSEHSDLDSFAGDLENLLDAE--- 1110
+Q++ + CQ +D Q Q+LS D DE GS E SD + A LE++LD
Sbjct: 609 FADMQEKYKKFCQRTFDLQNQTLSNTDLLSTDE-GSSGEDSDNEELATKLESMLDVNKGK 667
Query: 1111 ---------EFEEEE 1116
EFE+EE
Sbjct: 668 SFSFDKKKLEFEQEE 682
>gi|308505520|ref|XP_003114943.1| CRE-TAF-1 protein [Caenorhabditis remanei]
gi|308259125|gb|EFP03078.1| CRE-TAF-1 protein [Caenorhabditis remanei]
Length = 1748
Score = 224 bits (570), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 175/578 (30%), Positives = 284/578 (49%), Gaps = 92/578 (15%)
Query: 658 SDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVL 717
+DLS KD ++ ++EY EE P++LS GM + + Y+++ D G + +
Sbjct: 613 NDLSGKDENLVMIEYSEEHPVILSQPGMASKMKNYFKRRQAND-TEPTFDYGEMAFSHQI 671
Query: 718 TLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRRIDKV 777
PFLG ++ G S S+E N+YRAP++ HK +TDFLL+RS + + IR I +
Sbjct: 672 --------PFLGQLQPGQSLQSIENNLYRAPIYLHKRQSTDFLLIRS-QNQWFIRPIPAI 722
Query: 778 AVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAA--AKRGLLPCIGVDELSVQFP 835
+ QQ PL EV SP SK + + + +YR F A+ + R L ++++ FP
Sbjct: 723 FIAGQQCPLYEVPSPNSKRATVFVRDFLFAFIYRLFWASEHSPRRL----KMEDVRNAFP 778
Query: 836 NLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGL 895
+ +E+ IRK+LK C+ R+G WS+K F +PS+ ++ + PE C+ SM A
Sbjct: 779 HYAESNIRKRLKMCSTYTRNG-ADTFWSLKPEFRLPSKEEVLSMVTPEMCCAQYSMMAAE 837
Query: 896 YRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDR 955
RLK G + + + D+ + IE E++ PWN + F+A R
Sbjct: 838 QRLKDAGYGEKYF---FTPENDEGSDDEVT------IEDEIKCAPWNTTRAFMAS---QR 885
Query: 956 ENIERLEITGVGDPSGRGLGFSYVRAA--PKASVSSAMVKKKAAANRGGSTVTGTDADLR 1013
E L+ TG+ DP+G G GFSYVR + P ++ V KK VTGT+ADLR
Sbjct: 886 EKC-LLDQTGIADPTGCGQGFSYVRVSQKPHKDENATPVPKK--------LVTGTNADLR 936
Query: 1014 RLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAA------------------ 1055
+L ++ A+++ + V EE I+ TRW I +IR LS++ A
Sbjct: 937 KLPLKEAKQICRGYGVKEEEISALTRWEIIDVIRTLSTQAAKATKEGETVSGMARFARGN 996
Query: 1056 ---SGVQLQQQTRGKCQEIWDRQVQSLSAAD--DDEIGSDSEHSDLDSFAGDLENLLDAE 1110
S +Q++ R CQ I+D+Q Q+L+ + + S SD + A LE++L+A
Sbjct: 997 TRFSSADMQEKYRKHCQRIFDQQNQTLANTEPISTDDDSTDADSDNEELASRLESMLEAN 1056
Query: 1111 EFEEEESNYDTKHDKVEGVKGLKMRRRPIQVQAEEEIEDEAAEAAELCRLLMDD------ 1164
+G K + M + A+ + E E E +L R++ D
Sbjct: 1057 ----------------KGKKNISMSEK-----AKIDFETEEKEREDLKRMIHGDTVQKGE 1095
Query: 1165 -DEAELKKKKKKTKAQVEGGLSLAKS-ISGLEIVERLK 1200
E E+ ++KK+ +Q ++++ S ISG+ ++LK
Sbjct: 1096 KKEGEVTAEEKKSASQFGEDVAMSASKISGITANQQLK 1133
>gi|341886905|gb|EGT42840.1| hypothetical protein CAEBREN_07411 [Caenorhabditis brenneri]
Length = 1652
Score = 221 bits (563), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 174/574 (30%), Positives = 278/574 (48%), Gaps = 85/574 (14%)
Query: 659 DLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLT 718
DLS KD + ++EY EE P++LS GM + + Y+++ G+ G + +
Sbjct: 591 DLSGKDETLVMIEYSEEHPVMLSQPGMASKIKNYFKRRQ-GNDTEPTFDFGEMAFSHQI- 648
Query: 719 LEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRRIDKVA 778
PFLG ++ G S S+E ++YRAP++ HK +TDFLL+RS + + IR + +
Sbjct: 649 -------PFLGQLQPGQSLQSIENSLYRAPIYLHKRQSTDFLLIRS-QNQWFIRPLPVIF 700
Query: 779 VVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLS 838
+ QQ PL EV SP SK + + + +YR F A+ + ++++ FP+ +
Sbjct: 701 IAGQQCPLYEVPSPNSKRATLFVRDFLFAFIYRLFWASEHNPRR--LKMEDVRNAFPHYA 758
Query: 839 EAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRL 898
E+ IRK+LK C+ R G+ + W++K F +PS+ ++ + PE C+ SM A RL
Sbjct: 759 ESNIRKRLKMCSTFIRSGS-EAFWALKPEFRLPSKEEVLAMVTPEMCCAQYSMMAAEQRL 817
Query: 899 KHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENI 958
K G + P+ A IE E++ PWN S F+A RE
Sbjct: 818 KDAGYGEKYFFT---------PEHDEASEDEVTIEDEIKCAPWNTSRAFLAS---QREKC 865
Query: 959 ERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLRRLSME 1018
L+ TG+ DP+G G GFSYVR VS K + AA VTGT+ADLR+L ++
Sbjct: 866 -LLDQTGIADPTGCGQGFSYVR------VSQKPHKDENAAPVPKKLVTGTNADLRKLPLK 918
Query: 1019 AAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAA---------------------SG 1057
A+++ + V EE I+ TRW I +IR LS++ A S
Sbjct: 919 EAKQICRGYGVKEEEISALTRWEIIDVIRTLSTQAAKATKEGESVTGMARFARGNTRFSS 978
Query: 1058 VQLQQQTRGKCQEIWDRQVQSLSAAD--DDEIGSDSEHSDLDSFAGDLENLLDAEEFEEE 1115
+Q++ R CQ I+D+Q Q+L+ D + S SD + A LE++L
Sbjct: 979 ADMQEKYRKHCQRIFDQQNQTLANTDPISTDDDSTDADSDNEELASRLESML-------- 1030
Query: 1116 ESNYDTKHDKVEGVKGLKMRRRPIQVQAEEEIEDEAAEAAELCRLLMDD--------DEA 1167
E+N KH + +A+ + E E E +L R++ D E
Sbjct: 1031 EANKGKKHISLSD-------------KAQIDFESEEREREDLKRMIHGDTVQKPPEKKEG 1077
Query: 1168 ELKKKKKKTKAQVEGGLSLAKS-ISGLEIVERLK 1200
E+ ++KK+ +Q ++++ S ISG+ ++LK
Sbjct: 1078 EVTAEEKKSASQFGEDVAMSASKISGITANQQLK 1111
>gi|341875503|gb|EGT31438.1| hypothetical protein CAEBREN_07628 [Caenorhabditis brenneri]
Length = 1722
Score = 221 bits (562), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 174/576 (30%), Positives = 280/576 (48%), Gaps = 89/576 (15%)
Query: 659 DLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLT 718
DLS KD + ++EY EE P++LS GM + + Y+++ G+ G + +
Sbjct: 591 DLSGKDETLVMIEYSEEHPVMLSQPGMASKIKNYFKRRQ-GNDTEPTFDFGEMAFSHQI- 648
Query: 719 LEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRRIDKVA 778
PFLG ++ G S S+E ++YRAP++ HK +TDFLL+RS + + IR + +
Sbjct: 649 -------PFLGQLQPGQSLQSIENSLYRAPIYLHKRQSTDFLLIRS-QNQWFIRPLPVIF 700
Query: 779 VVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLS 838
+ QQ PL EV SP SK + + + +YR F A+ + ++++ FP+ +
Sbjct: 701 IAGQQCPLYEVPSPNSKRATLFVRDFLFAFIYRLFWASEHNPRR--LKMEDVRNAFPHYA 758
Query: 839 EAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRL 898
E+ IRK+LK C+ R G+ + W++K F +PS+ ++ + PE C+ SM A RL
Sbjct: 759 ESNIRKRLKMCSTFIRSGS-EAFWALKPEFRLPSKEEVLAMVTPEMCCAQYSMMAAEQRL 817
Query: 899 KHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENI 958
K G + P+ A IE E++ PWN S F+A RE
Sbjct: 818 KDAGYGEKYFFT---------PEHDEASEDEVTIEDEIKCAPWNTSRAFLAS---QREKC 865
Query: 959 ERLEITGVGDPSGRGLGFSYVRAA--PKASVSSAMVKKKAAANRGGSTVTGTDADLRRLS 1016
L+ TG+ DP+G G GFSYVR + P ++A V KK VTGT+ADLR+L
Sbjct: 866 -LLDQTGIADPTGCGQGFSYVRVSQKPHKDENAAPVPKK--------LVTGTNADLRKLP 916
Query: 1017 MEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAA--------------------- 1055
++ A+++ + V EE I+ TRW I +IR LS++ A
Sbjct: 917 LKEAKQICRGYGVKEEEISALTRWEIIDVIRTLSTQAAKATKEGESVTGMARFARGNTRF 976
Query: 1056 SGVQLQQQTRGKCQEIWDRQVQSLSAAD--DDEIGSDSEHSDLDSFAGDLENLLDAEEFE 1113
S +Q++ R CQ I+D+Q Q+L+ D + S SD + A LE++L
Sbjct: 977 SSADMQEKYRKHCQRIFDQQNQTLANTDPISTDDDSTDADSDNEELASRLESML------ 1030
Query: 1114 EEESNYDTKHDKVEGVKGLKMRRRPIQVQAEEEIEDEAAEAAELCRLLMDD--------D 1165
E+N KH + +A+ + E E E +L R++ D
Sbjct: 1031 --EANKGKKHISLSD-------------KAQIDFESEEREREDLKRMIHGDTVQKPPEKK 1075
Query: 1166 EAELKKKKKKTKAQVEGGLSLAKS-ISGLEIVERLK 1200
E E+ ++KK+ +Q ++++ S ISG+ ++LK
Sbjct: 1076 EGEVTAEEKKSASQFGEDVAMSASKISGITANQQLK 1111
>gi|196005889|ref|XP_002112811.1| hypothetical protein TRIADDRAFT_56340 [Trichoplax adhaerens]
gi|190584852|gb|EDV24921.1| hypothetical protein TRIADDRAFT_56340 [Trichoplax adhaerens]
Length = 1794
Score = 219 bits (558), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 156/490 (31%), Positives = 236/490 (48%), Gaps = 72/490 (14%)
Query: 659 DLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGD------QAGALLCSGNNC 712
DLS DG V L+EY EE P L+ GM + + YY+K + D + G ++ NN
Sbjct: 647 DLSATDGEVMLLEYSEEHPPLIQAVGMASRVKNYYRKKASKDTGPQSPEIGEMVMVNNN- 705
Query: 713 LGNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIR 772
SPFLG + G + E N+YR P++ HK+ FL++++ G IR
Sbjct: 706 ------------SPFLGSLSHGQLLQAFENNLYRTPIYKHKMPDDLFLVIKNHNG-YHIR 752
Query: 773 RIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAA---KRGLLPCIGVDE 829
+ Q P EV SP SK + + + V +YR F+ + KR I +D
Sbjct: 753 EAKWLHTGGQLCPKFEVPSPNSKKASNFVRDFLQVYIYRLFAKSTDNPKR-----IKMDA 807
Query: 830 LSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYE 889
+ F + SE+ IRK+LK CA +R G+ W +K F +PSE +LR + PE C+Y
Sbjct: 808 IKKSFTSHSESSIRKRLKLCADFKRTGDHSNYWILKPDFRLPSEEELRDMVTPEQACAYA 867
Query: 890 SMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVA 949
M A +LK G T+ + SQ IE E++ PWN + F+
Sbjct: 868 CMLAAEQKLKDAGYVGKTVVEDEDNEDSQ------------KIEDEVKTAPWNTTRAFL- 914
Query: 950 CTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTD 1009
Q + +L +TG DP+G G GF+YVR K V K ++ TVTGTD
Sbjct: 915 ---QALQGKCQLSLTGDADPTGCGEGFAYVRVPNKPVVP----KDESNVINKQRTVTGTD 967
Query: 1010 ADLRRLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG------------ 1057
ADLR+LS++ AR+VL F + +E I K +RW I ++R +S+ SG
Sbjct: 968 ADLRKLSLKNARQVLRDFGISDEEIKKLSRWEVIDVVRTMSTAAVKSGEDGLSKFARGSR 1027
Query: 1058 ---VQLQQQTRGKCQEIWDRQVQSLSAADDDEIGSDSEHS------DLDSFAGDLENLLD 1108
+ Q++ R +CQ I++ Q + L++ +E+ S E S + D +LE++L
Sbjct: 1028 FSLAEHQERYREECQRIFEIQNKVLAS---EEVLSTDEESVSEGDDEFDELGKNLESMLM 1084
Query: 1109 AEEFEEEESN 1118
++ E SN
Sbjct: 1085 NKKSAAEYSN 1094
>gi|313227710|emb|CBY22858.1| unnamed protein product [Oikopleura dioica]
Length = 2003
Score = 219 bits (557), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 140/444 (31%), Positives = 226/444 (50%), Gaps = 50/444 (11%)
Query: 654 FKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCL 713
+K SDLS +DG + L EYCEE P L + GM + + + +++ + G
Sbjct: 973 MRKLSDLSAQDGDIVLTEYCEEFPPLFNMVGMASRIKIWRRRTCRDKPMNRIYKYG---- 1028
Query: 714 GNVLTLEPGDKS--PFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISI 771
EP + PFLG + A SQS+ E +M+R P+F H + TDFLL+R+ + +
Sbjct: 1029 ------EPAYYTHPPFLGQVNADSSQSAFENDMFRCPLFYHNTSKTDFLLIRN-EDTWCL 1081
Query: 772 RRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELS 831
R + + ++ QQ PL++V P SK ++S + +LV +YR F + + I ++E+
Sbjct: 1082 REVPETFLLGQQCPLIDVPGPNSKKATSFSRDFLLVFLYRLFLNSTVQP--KKIRMEEVR 1139
Query: 832 VQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESM 891
FP LSE IRK+LK+CA +R G W + + +P+E ++R PE C++ SM
Sbjct: 1140 KAFPALSEGSIRKRLKQCAEFKRTGIDSNWWVLASDYRLPTEEEIRAHVKPEEACAFYSM 1199
Query: 892 QAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACT 951
A RLK G + +L DE AS ++ E+ PW+ + F+A
Sbjct: 1200 LAAEQRLKDAGYREKSL----------FLDEKDDEDEASKMDIEILCAPWHTTRAFLAAM 1249
Query: 952 NQDRENIERLEITGVGDPSGRGL-GFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDA 1010
+N L+ITG DP+G+ GFSYV+ K + + + + VTGTDA
Sbjct: 1250 ----KNKCLLDITGAADPTGQAREGFSYVKIPSKPN-----QRDENTPAQPKKLVTGTDA 1300
Query: 1011 DLRRLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG------------- 1057
DLRRL+++ A+++ K+ V + ++ K TRW I M+R LS+ QA G
Sbjct: 1301 DLRRLNLKQAKDMCRKWGVSDAVMNKLTRWEVIDMVRTLSTRQARVGDTSVSKFARGNRF 1360
Query: 1058 --VQLQQQTRGKCQEIWDRQVQSL 1079
+ ++ + +CQ+ +D Q + L
Sbjct: 1361 SAAEHHERYKEECQQRFDLQAKQL 1384
>gi|340382615|ref|XP_003389814.1| PREDICTED: transcription initiation factor TFIID subunit 1-like,
partial [Amphimedon queenslandica]
Length = 1638
Score = 218 bits (556), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 150/467 (32%), Positives = 236/467 (50%), Gaps = 56/467 (11%)
Query: 637 RAQKLPGENKSLRPPGAFKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKS 696
R Q GE +R P DLS DGH+ L EY EE P L+ GM + YY++
Sbjct: 612 RIQSGGGEVFFMRSP------EDLSSCDGHLILAEYSEEHPPLVMATGMATKIKNYYRR- 664
Query: 697 SPGDQAGALLCSGNNCLGNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVAT 756
P GA+ G L+ + S FLG++K G + S E N++RAPV+ H V+
Sbjct: 665 -PEKVKGAVPPEFE--YGETTYLQ--NTSYFLGNLKPGQALQSFECNLFRAPVYLHNVSE 719
Query: 757 TDFLLVRSAKGKISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAA 816
TDFL++RS K IR + + VV Q+ P +EV +P SK + + + + V +YR F +
Sbjct: 720 TDFLIIRS-DNKYYIRELFDLFVVGQECPKIEVPAPNSKTVNQFQKDFLQVYLYRLFQDS 778
Query: 817 ---AKRGLLPCIGVDELSVQFPN--LSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIP 871
K+ I ++ + FP+ +SE++IRK LK+ A +R+G W ++ +P
Sbjct: 779 DDDPKK-----IKMEMVRKAFPSSVMSESVIRKVLKQFADFKREGYESGSWVLRSDVRLP 833
Query: 872 SEGDLRKLAYPEHVCSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASH 931
+E ++R + PE C++ SM A RLK G +L A + ++
Sbjct: 834 TEEEIRAMVTPEQACAFFSMLAAEQRLKDAGYGGKSLFAVEEEEEGEETNQ--------K 885
Query: 932 IERELQITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAM 991
I+ E++ PWN + +F+ + L ++G DP+G G GFSY R PK + +
Sbjct: 886 IDDEVRAAPWNTTHHFINAMKGKYQ----LSVSGPADPTGCGEGFSYTRLNPKEAGHPST 941
Query: 992 VKKKAAANRGGSTVTGTDADLRRLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSS 1051
V + ++ TV GT+ADLR+L + AR VL F VPEE IAK +RW + ++R +S+
Sbjct: 942 V----SPSKRPKTVMGTEADLRKLKLSKARNVLRNFGVPEEEIAKLSRWKVVDLVRSIST 997
Query: 1052 EQAASG-----------------VQLQQQTRGKCQEIWDRQVQSLSA 1081
E A SG + Q++ + +CQ ++D Q + L +
Sbjct: 998 EAARSGGGTYYSLMFARGSRCSQSEAQERYKEECQRVFDIQNKVLCS 1044
>gi|320165033|gb|EFW41932.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 1806
Score = 218 bits (554), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 146/442 (33%), Positives = 225/442 (50%), Gaps = 40/442 (9%)
Query: 654 FKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCL 713
K + DLS +DG + L+EYCEE P L+SN GM + L Y+++ P D L G
Sbjct: 827 MKTQRDLSGRDGDIVLLEYCEEFPPLVSNVGMVSRLYNLYRRTEPQDDNAPELPFGMTRF 886
Query: 714 GNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRR 773
D SPFLG +K G + ++ +Y AP + H++A TDFL++R K IR
Sbjct: 887 QGA-----ADSSPFLGQLKPGSALQYVDNTLYLAPAYPHEIAPTDFLVIR-VKDHHYIRP 940
Query: 774 IDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAA------KRGLLPCIGV 827
ID + V+ Q P +EV +P SK + NR+ +YR+ + + P + +
Sbjct: 941 IDGLFVLGQTLPKIEVPAPNSKKASDFMRNRVQAFIYRQLKQSKLSIKKNDKSRRPFVKL 1000
Query: 828 DELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQV--WSMKRTFHIPSEGDLRKLAYPEHV 885
+L FP++ A++RK+LK R G G Q W ++ IP E +LR+L PE
Sbjct: 1001 GDLIAAFPSIPVAMLRKRLKILCECVRSGLGDQSEEWELRTNQRIPPEEELRQLVTPEQA 1060
Query: 886 CSYESMQAG--LYRLKHLGITQLTL-PASISSAMSQLPDEAIALAAASHIERELQITPWN 942
C++ESM A + R G L L P S++ + + I+ EL++ PWN
Sbjct: 1061 CAHESMLASQQMLRDSGFGADDLILEPPSLTPDGDEEDQD-------QRIQTELKLAPWN 1113
Query: 943 LSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASV-----SSAMVKKKAA 997
+ F+ ++ L++TG GDP+G G GFSY+RA K V +A K+K
Sbjct: 1114 TTHTFLDA----QQGKCHLKLTGPGDPTGAGEGFSYIRAPSKPIVHNREREAAKPKQKKE 1169
Query: 998 ANRGGSTVTGTDADLRRLSMEAAREVL-LKFNVPEEMIAKQTRWHRIAMIRKLSSEQ--- 1053
++ TV GT++DLR++ + AR +L KF + +K RW IA++RK+SS Q
Sbjct: 1170 PHK---TVEGTESDLRKIPLVEARNMLQQKFGISLSQTSKMPRWDVIALLRKMSSSQGEG 1226
Query: 1054 AASGVQLQQQTRGKCQEIWDRQ 1075
AA L + RG+ + + + Q
Sbjct: 1227 AADATDLSKWARGERRSVQEHQ 1248
>gi|212645067|ref|NP_493426.2| Protein TAF-1 [Caenorhabditis elegans]
gi|189309796|emb|CAB04907.3| Protein TAF-1 [Caenorhabditis elegans]
Length = 1744
Score = 217 bits (553), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 149/452 (32%), Positives = 225/452 (49%), Gaps = 63/452 (13%)
Query: 659 DLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLT 718
DLS KD + ++EY EE P++LS GM + + Y+++ D
Sbjct: 594 DLSGKDETLVMIEYSEEHPVILSQPGMASKMKNYFKRRQANDSEPTFTFG---------E 644
Query: 719 LEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRRIDKVA 778
L + PFLG ++ G S S+E +YRAP++ HK TDFLL+RS + IR + +
Sbjct: 645 LAFSHQIPFLGQLQPGQSLQSIENMLYRAPIYLHKRQNTDFLLIRSM-NQWYIRPLPSIF 703
Query: 779 VVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSA--AAKRGLLPCIGVDELSVQFPN 836
V QQ PL EV SP SK + + + +YR F A ++ R L +D++ FP+
Sbjct: 704 VAGQQCPLYEVPSPNSKRATVFVRDFLFAFIYRLFWASDSSPRRL----KMDDVRNAFPH 759
Query: 837 LSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLY 896
+E+ IRK+LK C+ R G+ + WS+K F +PS+ ++ + PE C+ SM A
Sbjct: 760 YAESNIRKRLKMCSTFVRQGS-ETYWSLKPDFRLPSKEEVLSMVTPEMCCAQYSMMAAEQ 818
Query: 897 RLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRE 956
RLK G + + S+ DE IE E++ PWN + F+A RE
Sbjct: 819 RLKDAGYGEKYFFTPENDEGSE--DEVT-------IEDEIKCAPWNTTRAFLAS---QRE 866
Query: 957 NIERLEITGVGDPSGRGLGFSYVRAA--PKASVSSAMVKKKAAANRGGSTVTGTDADLRR 1014
L+ TG+ DP+G G GFSYVR + P ++ V KK VTGT+ADLR+
Sbjct: 867 KC-LLDQTGIADPTGCGQGFSYVRVSQKPHKDENATPVPKK--------LVTGTNADLRK 917
Query: 1015 LSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAA------------------- 1055
L ++ A+++ + V EE I+ TRW I +IR LS++ A
Sbjct: 918 LPLKEAKQICRGYGVKEEEISALTRWEIIDVIRTLSTQAAKATKDGEIIAVSGMARFARG 977
Query: 1056 ----SGVQLQQQTRGKCQEIWDRQVQSLSAAD 1083
S +Q++ R CQ I+D+Q Q+L+ D
Sbjct: 978 NTRFSSADMQEKYRKHCQRIFDQQNQTLANTD 1009
>gi|268569302|ref|XP_002640484.1| C. briggsae CBR-TAF-1 protein [Caenorhabditis briggsae]
Length = 1729
Score = 216 bits (549), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 184/616 (29%), Positives = 288/616 (46%), Gaps = 112/616 (18%)
Query: 654 FKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCL 713
K+ DLS +D + ++EYCEE P+LL GM + + Y+++ D
Sbjct: 589 MKEIQDLSGRDEKLVMIEYCEEHPVLLGQPGMASKIKNYFKRRQANDTEP---------- 638
Query: 714 GNVLTLEPGD-----KSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGK 768
T E G+ + PFLG ++ G S S+E ++YRAP+F HK TDFLL+RS +G+
Sbjct: 639 ----TFEYGEIAFSHQIPFLGQLQPGQSLQSIENSLYRAPIFMHKRTRTDFLLIRS-QGQ 693
Query: 769 ISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREF--SAAAKRGLLPCIG 826
IR + + V QQ PL EV SP SK + + + +YR F S + R L
Sbjct: 694 WYIRPLPSLFVAGQQCPLYEVPSPNSKRATVFVRDFLFAFIYRLFWSSEHSPRRL----K 749
Query: 827 VDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVC 886
++++ FP+ +E+ IRK+LK C+ R G + W +K F +PS+ ++ + PE C
Sbjct: 750 MEDVRNAFPHYAESNIRKRLKMCSTFTRYG-AETYWLLKPEFRLPSKEEVLSMVTPEMCC 808
Query: 887 SYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSN 946
+ SM A RLK G + + + D+ + IE E++ PWN +
Sbjct: 809 AQYSMMAAEQRLKDAGYGEKYF---FTPENDEGSDDEVT------IEDEIKCAPWNTTRA 859
Query: 947 FVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVT 1006
F+A RE L+ TG+ DP+G G GFSYVR VS K + A VT
Sbjct: 860 FLAS---QREKC-LLDQTGIADPTGCGQGFSYVR------VSQKPHKDENATPAPKKLVT 909
Query: 1007 GTDADLRRLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAA----------- 1055
GT+ADLR+L ++ A+E+ + V +E I+ TRW I +IR LS++ A
Sbjct: 910 GTNADLRKLPLKEAKEICRTYGVKDEEISALTRWEIIDVIRTLSTQAAKATKEGETLSAV 969
Query: 1056 -------------SGVQLQQQTRGKCQEIWDRQVQSL--SAADDDEIGSDSEHSDLDSFA 1100
S +Q++ R CQ +D Q +L + A + S SD + A
Sbjct: 970 SGMARFARGNTRFSSADMQEKYRKHCQRTFDLQNHTLANTEAISTDDDSTDADSDNEELA 1029
Query: 1101 GDLENLLDAEEFEEEESNYDTKHDKVEGVKGLKMRRRPIQVQAEEEIEDEAAEAAELCRL 1160
LE++L+A +G K + M + A+ + E E E +L R+
Sbjct: 1030 SRLESMLEAN----------------KGKKVISMSEK-----AKIDFETEEREREDLKRM 1068
Query: 1161 LMDD---------DEAELKKKKKKTKAQVEGGLSLAKS-ISGLEIVERLKKANKPAKHIA 1210
+ D E+E ++KK +Q ++++ S ISG+ ++LK I
Sbjct: 1069 IHGDAVNSKGAEKKESEATAEEKKNASQFGEDVAMSASKISGITANQKLK--------IF 1120
Query: 1211 ITVQ-PNGSHTANEQI 1225
TV+ P+G T +I
Sbjct: 1121 RTVKGPDGKETTRVEI 1136
>gi|432096330|gb|ELK27091.1| Transcription initiation factor TFIID subunit 1 [Myotis davidii]
Length = 1914
Score = 214 bits (545), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 160/511 (31%), Positives = 227/511 (44%), Gaps = 103/511 (20%)
Query: 654 FKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCL 713
+ DL+ KDG + L EY EE L+ GM + YY K PG GA C
Sbjct: 676 MRTSQDLTGKDGDLILAEYSEENGPLMMQVGMATKIKNYY-KRKPGKDPGAPDCK----Y 730
Query: 714 GNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRR 773
G + SPFLG + G + E N++RAP++ HK+ TDFL++R+ +G IR
Sbjct: 731 GETVYCH---TSPFLGSLHPGQLLQAFENNLFRAPIYLHKMPETDFLIIRTRQG-YYIRE 786
Query: 774 IDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQ 833
+ + VV QQ PL EV P SK T+ R+F A + L
Sbjct: 787 LVDIFVVGQQCPLFEVPGPNSKRANTH---------IRDFLQAFENNL------------ 825
Query: 834 FPNLSEAIIRKKLKECAFL---RRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYES 890
I K+ E FL R G W +K F +P+E ++R + PE C+Y S
Sbjct: 826 ---FRAPIYLHKMPETDFLIIQTRQGMDSNWWVLKSDFRLPTEEEIRAMVSPEQCCAYYS 882
Query: 891 MQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVAC 950
M A RLK G + + A P+E I+ E++ PWN + F+A
Sbjct: 883 MIAAEQRLKDAGYGEKSFFA---------PEEENEEDFQMKIDDEVRTAPWNTTRAFIAA 933
Query: 951 TNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKAS----------VSSAMVKKKAAANR 1000
+ LE+TGV DP+G G GFSYV+ K + V + A R
Sbjct: 934 M----KGKCLLEVTGVADPTGCGEGFSYVKIPNKPTQQKDDKEPQPVKKTVTGTDADLRR 989
Query: 1001 GG--------------------------STVTGTDADLRRLSMEAAREVLLKFNVPEEMI 1034
TVTGTDADLRRLS++ A+++L KF VPEE I
Sbjct: 990 LSLKNAKQLLRKFGVPEEEDDKEPQPVKKTVTGTDADLRRLSLKNAKQLLRKFGVPEEEI 1049
Query: 1035 AKQTRWHRIAMIRKLSSEQAASG---------------VQLQQQTRGKCQEIWDRQVQSL 1079
K +RW I ++R +S+EQA SG + Q++ + +CQ I+D Q + L
Sbjct: 1050 KKLSRWEVIDVVRTVSTEQAHSGEGPMSKFARGSRFSVAEHQERYKEECQRIFDLQNKVL 1109
Query: 1080 SAAD---DDEIGSDSEHSDLDSFAGDLENLL 1107
S+ + D S +E SD + +EN+L
Sbjct: 1110 SSTEVLSTDTDSSSAEDSDFEEMGKAIENML 1140
>gi|312383777|gb|EFR28721.1| hypothetical protein AND_02947 [Anopheles darlingi]
Length = 1886
Score = 211 bits (538), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 146/458 (31%), Positives = 229/458 (50%), Gaps = 57/458 (12%)
Query: 659 DLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLT 718
DL+ +DG + L+E+CEE P L++ GM + + +Y++ D G +
Sbjct: 734 DLTGRDGELILIEFCEEHPPLMNQVGMASKIKNFYKRKMGKDPGPPEFRFGETHYAHT-- 791
Query: 719 LEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRRIDKVA 778
SPFLG + G ++E NMYRAP++ + TDFL++R+ + +R +D +
Sbjct: 792 ------SPFLGILHHGQCIQAIENNMYRAPIYPQTMGDTDFLVIRT-RNNYFVREVDALF 844
Query: 779 VVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLS 838
Q+ PL EV P SK + + + V +YR F + R I +D++ FP S
Sbjct: 845 TAGQECPLYEVPGPNSKRANNFVRDFLQVFIYRLFWKS--RDNPRKIRMDDIKKAFPAHS 902
Query: 839 EAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRL 898
E+ IRK+LK CA +R G W +K F +PSE ++R +M AG Y
Sbjct: 903 ESSIRKRLKLCADFKRTGMDSNFWVIKPEFRLPSEEEIR------------AMDAG-YGE 949
Query: 899 KHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENI 958
K + A + DE + L ++ E+++ PWN + ++ Q
Sbjct: 950 KFI------------FAQQEDDDEEMQL----KMDDEVKVAPWNTTRAYI----QAMRGK 989
Query: 959 ERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLRRLSME 1018
L++ G DP+G G GFSYVR K + + K+ ++ TVTGTDADLRRLS+
Sbjct: 990 CILQLNGPADPTGCGEGFSYVRMPNKPTQQN----KEETESQPKRTVTGTDADLRRLSLN 1045
Query: 1019 AAREVLLKFNVPEEMIAKQTRWHRIAM-----IRKLSSEQAASGVQLQQQTRGKCQEIWD 1073
A+ +L KF VPEE I K +RW I + + K S S + Q++ + +CQ I+D
Sbjct: 1046 NAKALLRKFQVPEEEIKKLSRWEVIDVAGEEGMDKFSRGNRFSIAEHQERYKEECQRIFD 1105
Query: 1074 RQVQSLSAAD----DDEIGSDSEHSDLDSFAGDLENLL 1107
Q + L++A+ D+ + SE SDL+ +LEN+L
Sbjct: 1106 LQNRVLASAEVLSTDEGESTASEESDLEELGKNLENML 1143
Score = 50.8 bits (120), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 108/254 (42%), Gaps = 52/254 (20%)
Query: 10 SKDGRDEDDEEEYEDVSGGNRLLGFMFGNVDYAGDLDVDYLDEDAKEHLAAVADKLGPS- 68
S D ++ D+ E GG L GF+FGNVD G+LD D+LDE+AK+ L++++ ++G S
Sbjct: 2 SNDSDNDSDKNE-----GGLNLAGFLFGNVDEHGNLDGDFLDEEAKQQLSSLS-RMGLSS 55
Query: 69 -----LTDIDVWN---SQSCFQLFCSYCLLSVNSPQPPVDAVEQDYDKKAEDAVDYEDID 120
L D D + + S + D+ Y KA+ AVDY DI
Sbjct: 56 FLSAMLHDDDAEKPAPASNSDSDDSSSSDDDRRRRRYDDDSDGASYKVKADCAVDYSDIQ 115
Query: 121 EQYE-GPEIQIASEEDYLLPKKEYFAAEVSLAALKPTASPFDDENYDEDEELEKEHEEVD 179
E E P + SE + +K+ AA DE +K EE
Sbjct: 116 ELAEDSPPPLVVSETNG---EKDETAA---------------------DETSDKSAEEAK 151
Query: 180 KETEDTTTILSGEQVECATAVPDGEKSPEGDPQVGSLGAE---EEMTAGVKDYDEELADI 236
+E +DT+ G++ D K EGD Q G+E E T V D D L
Sbjct: 152 EEKQDTSEAADGKET-----TEDTPKPAEGDEQKAESGSEPAASEATGEVNDKD--LMPP 204
Query: 237 LKGPL--DGQVSTP 248
P+ DG +TP
Sbjct: 205 PTAPVSGDGTATTP 218
>gi|412990886|emb|CCO18258.1| predicted protein [Bathycoccus prasinos]
Length = 1742
Score = 211 bits (536), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 168/515 (32%), Positives = 248/515 (48%), Gaps = 65/515 (12%)
Query: 608 LEDHKSLADQNVRPN---SLIHLIRTKIHLLPR--AQKLPGENKSLRPPGAFKKKSDLSV 662
L++ SL D V+P ++ + TK+H++ A P ++++L PPGAFKK SDLS+
Sbjct: 722 LDESTSLKDCGVKPQVGAPILCIESTKVHVVSEEIATMRPIDDRALAPPGAFKKPSDLSI 781
Query: 663 KDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLTLEPG 722
+DGH+ L+ Y E P L++ GM A TYY + S GDQ GA G + G V L+P
Sbjct: 782 EDGHIMLVNYAEADPPLIAKPGMAAKKVTYYLRKSAGDQ-GARPLMGKS--GQVFDLKPN 838
Query: 723 DKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTD------FLLVRSAKGKISIRRIDK 776
SPFL + G + LET+MYR+P+F D FLL R GK S+R++
Sbjct: 839 APSPFLSGLPPGIPVNVLETSMYRSPLFDRTPDMDDDSQPGMFLLARGPTGKWSMRQVPH 898
Query: 777 VAVVAQQEPLMEVMSPGSKNLQTYSINRMLVN--VYREFSAAAKRGL-----LP-CIGVD 828
V Q EP +EV PGS L+ I +VN V + F KR LP + V
Sbjct: 899 FFVAGQMEPHVEVPMPGS--LECIDIEERMVNATVLKHFLELQKRTTPEDAHLPKLVKVS 956
Query: 829 ELSVQFPN-LSEAIIRKKLKE--CAFLR-RDGNGKQVWSMKRTFHIPSEGDLRKLAYPEH 884
+++ N L+E IR KL+ CA +R R+G K+ +++ + E +++K+ PE
Sbjct: 957 DIAATLNNVLTEDQIRSKLRLRICAPVRSREGISKEDYALNPEYRFEHEKEIQKMCTPED 1016
Query: 885 VCSYESMQAGLY------------RLKHLGITQLTLPASISSAMSQLPDEAIALAAA--S 930
+C+YESM+ + R+K L S+++A++ L A A
Sbjct: 1017 ICAYESMRHAITELMQDRTPEQVKRMKKLLAVDFQ---SLTNAVTILVRHAKGKRARDLE 1073
Query: 931 HIERELQITPWNLSSNFVA------CTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPK 984
IE LQ+ PW+++ F+A + D R E G + YVR K
Sbjct: 1074 RIELLLQMQPWSVTREFLAYAAGKGVLHIDNSKKIRKET---------GKFWHYVRRLTK 1124
Query: 985 ASVSSAMVKKKAAANRGGSTVTGTDADLRRLSMEAAREVLLKFNVPEEMIAKQTRWHRIA 1044
+ K TVTGT ADLR+L+M A +L F + +E+I K RW RI
Sbjct: 1125 PPPPEELRPKVQPG-----TVTGTAADLRKLTMPQAARILRNFGIEDEVILKLERWKRIG 1179
Query: 1045 MIRKLSSEQAASGVQLQQQTRGKCQEIWDRQVQSL 1079
+IR+LS A G Q + I +VQ +
Sbjct: 1180 LIRELSGAATADGNATHQNMSRFARSIKLSEVQQV 1214
>gi|339248735|ref|XP_003373355.1| putative bromodomain protein [Trichinella spiralis]
gi|316970537|gb|EFV54460.1| putative bromodomain protein [Trichinella spiralis]
Length = 1769
Score = 204 bits (520), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 124/385 (32%), Positives = 201/385 (52%), Gaps = 37/385 (9%)
Query: 654 FKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCL 713
+K +DL+ KDG + L+EYCEE P LLS GMG+ + Y+++ D G
Sbjct: 571 MRKPADLTGKDGELILLEYCEEHPPLLSQPGMGSKIKNYFKRLPGKDDQEPQFEYGETSY 630
Query: 714 GNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRR 773
+ +PFLG + G + ++E N++RAP+F H+V +TDFL++R+ G + IR+
Sbjct: 631 SH--------STPFLGTLAPGETLQAIENNLFRAPIFRHRVPSTDFLIMRTRSG-LYIRK 681
Query: 774 IDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQ 833
++ + V Q+ PL+EV SP SK + + +L +YR F + + + +
Sbjct: 682 VEALFCVGQELPLIEVPSPNSKRACNFVRDFLLAFIYRLFWNSKEDPRRLRMDDLRRA-- 739
Query: 834 FPNLSEAIIRKKLKECAFLRRDGNG--KQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESM 891
FP+ +E+ IRK+L+ C+ RR G+G W +K+ F +P+ +L + PE C+Y SM
Sbjct: 740 FPHHAESSIRKRLRICSDFRRLGSGIDSNFWVLKQDFRLPNTDELWSMITPEICCAYYSM 799
Query: 892 QAGLYRLKHLGITQ--LTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVA 949
A RLK G + P Q+ + E++ PWN + +++
Sbjct: 800 LAAEQRLKDAGYGEKYFFTPEEDEDEDDQV-----------KMADEIKCAPWNTTRAYIS 848
Query: 950 CTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTD 1009
N L+ITGV DP+G G GFS+V+ + K +K+ VTGTD
Sbjct: 849 AVNGKC----LLDITGVADPTGCGEGFSFVKLSSKP-------QKEEVPPPVKKNVTGTD 897
Query: 1010 ADLRRLSMEAAREVLLKFNVPEEMI 1034
ADLR+LS++ A+++L +F V EE +
Sbjct: 898 ADLRKLSLKDAKQLLREFGVQEEEV 922
>gi|308808219|ref|XP_003081420.1| putative HAC13 protein (ISS) [Ostreococcus tauri]
gi|116059882|emb|CAL55589.1| putative HAC13 protein (ISS) [Ostreococcus tauri]
Length = 1387
Score = 202 bits (514), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 150/502 (29%), Positives = 234/502 (46%), Gaps = 82/502 (16%)
Query: 624 LIHLIRTKIHLLPRAQKLP--GENKSLRPPGAFKKKSDLSVKDGHVFLMEYCEERPLLLS 681
+I+L+ KI + + L + L PPGA+KK SDLS + G + +++Y E RPL +S
Sbjct: 497 IIYLVAPKITFISEQEALAPLASDAVLAPPGAYKKPSDLSARTGTLMMVQYTEARPLFIS 556
Query: 682 NAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLTLEPGDKSPFLGDIKAGCSQSSLE 741
GMGA YY++ + GDQ N V+ L+P SPFL ++ G +SLE
Sbjct: 557 KPGMGAKKVVYYRRKTLGDQGARPYA---NATTTVVDLKPNAPSPFLAELPQGKGITSLE 613
Query: 742 TNMYRAPVFTHKVA--TTDFLLVRSAKGKISIRRIDKVAVVAQQEPLMEVMSPGSKNLQT 799
TNM+RAP+F + DFLL+R+ GK+++R + + QQEP M + +PGS L+
Sbjct: 614 TNMFRAPMFQQPKSDEMVDFLLIRAPNGKLTMREAPPLFLAGQQEPHMNIPAPGSDVLKD 673
Query: 800 YSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLSEAIIRKKLKE--CAFLRRDGN 857
+ LVN + A + G +P ++RKK++ CA R
Sbjct: 674 F--EERLVNA----TGAIEPGTMP-----------------MVRKKIRSKICAPRRGANA 710
Query: 858 GKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESM---------------QAGLYRLKHLG 902
+ + ++ E +++++A PE +C+YES Q + RL L
Sbjct: 711 NDDEFILNPSYRFQHEKEVQRMASPEEICAYESYRHSVAVLCKERTREEQERILRLSTLT 770
Query: 903 ITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDR------- 955
+ QL +I S E H+E LQI PW +S F+ +R
Sbjct: 771 LQQLKNAVTILVRHS----EGKRKRQLEHLELWLQIQPWAQTSEFLKALEGNRGILHLET 826
Query: 956 -ENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLRR 1014
I+RL G ++Y+R + +V ++ R TVTGT+ADLR+
Sbjct: 827 SRRIQRLT----------GKFYNYIR---RMTVPDPPEDRR--PRREPGTVTGTNADLRK 871
Query: 1015 LSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASGVQLQQQTRGKCQEIWDR 1074
L+M A+ +L F V +E+I + RW RI +IR+LS A G Q G R
Sbjct: 872 LTMPQAQRILENFGVEKEVILQLERWKRIGLIRELSGAATADG---NNQHAGMA-----R 923
Query: 1075 QVQSLSAADDDEIGSDSEHSDL 1096
+ L ++ ++ EHS+L
Sbjct: 924 FARRLRVSEAQQLTEIREHSNL 945
>gi|241708328|ref|XP_002413335.1| transcription initiation factor tfii-D, putative [Ixodes scapularis]
gi|215507149|gb|EEC16643.1| transcription initiation factor tfii-D, putative [Ixodes scapularis]
Length = 1617
Score = 201 bits (510), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 130/403 (32%), Positives = 201/403 (49%), Gaps = 39/403 (9%)
Query: 659 DLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGAL-LCSGNNCLGNVL 717
DL+ +DG + L EY EE P L+ GM + YY K PG +GA G +
Sbjct: 630 DLTGRDGDIILSEYSEEHPPLIMQVGMATKIKNYY-KRRPGKDSGAPEYKYGETAYAHT- 687
Query: 718 TLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRRIDKV 777
SPFLG + G S + E N++RAP++ H + TDFL++R+ + IR ++ +
Sbjct: 688 -------SPFLGSLAPGQSLQAFENNLFRAPIYEHNLPDTDFLVIRT-RQHYYIREVETI 739
Query: 778 AVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREF---SAAAKRGLLPCIGVDELSVQF 834
V Q+ PL EV P SK + + + V +YR F + + +R I ++++ F
Sbjct: 740 YTVGQELPLFEVPGPNSKRANNFVRDFLQVFIYRLFWKSTDSPRR-----IKMEDIKKAF 794
Query: 835 PNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAG 894
P+ SE+ IRK+LK CA +R G W +K F +P+E ++R + PE C+Y SM +
Sbjct: 795 PSHSESSIRKRLKLCADFKRTGMDSNWWVLKPEFRLPTEDEIRTMVSPEQCCAYYSMISA 854
Query: 895 LYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQD 954
RLK G + +L A P++ ++ E++ PWN + F++
Sbjct: 855 EQRLKDAGYGEKSLFA---------PEDENDEEMQVKMDDEVKAAPWNTTRAFISSV--- 902
Query: 955 RENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLRR 1014
+ L++TGV DP+ G GFSYVR K SS + ++ + RG S T L
Sbjct: 903 -KGKCLLQLTGVADPTSCGEGFSYVRVPNKPQHSSYRMARRPSCKRGKSNQLFTKLHL-- 959
Query: 1015 LSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG 1057
+ LL EE+I K +RW I ++R LS+EQA +G
Sbjct: 960 -----LNKYLLSEFYSEELIKKLSRWEVIDVVRTLSTEQAKAG 997
>gi|145350540|ref|XP_001419661.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579893|gb|ABO97954.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 1559
Score = 200 bits (509), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 151/541 (27%), Positives = 252/541 (46%), Gaps = 73/541 (13%)
Query: 599 VKLFYLG-----KELEDHKSLADQNVRPN---SLIHLIRTKIHLLPRAQKLP--GENKSL 648
+ L+Y G ++L + +L D ++ +I+L+ K+ + L + L
Sbjct: 606 IHLYYPGSPKPNEKLNEEMTLVDAGLQAQVGLPIIYLVAPKVTFISEEAALAPLASDAVL 665
Query: 649 RPPGAFKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCS 708
PPGA+KK SDLS + G + +++Y E RP L++ GMGA YY++ + GDQ
Sbjct: 666 APPGAYKKPSDLSARSGTLMMVQYTEARPPLIAKPGMGAKKVVYYRRKTLGDQGARPYA- 724
Query: 709 GNNCLGNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVA--TTDFLLVRSAK 766
N V+ L+P SPFL ++ G ++LET+M+RAP+F + DFLL+R+
Sbjct: 725 --NATTTVIDLKPNAPSPFLAELPPGRGITALETSMFRAPLFQQAKSDDYVDFLLIRAPN 782
Query: 767 GKISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGL----- 821
GK+++R + + QQEP +E+ +PGS L+ + + V R F +GL
Sbjct: 783 GKLTLREAPSLHLAGQQEPHVEIPAPGSDMLKDFEERLVNATVLRYFLNLQAKGLIEPGT 842
Query: 822 LPCIGVDELSVQFPN-LSEAIIRKKLKE--CAFLRRDGNGKQVWSMKRTFHIPSEGDLRK 878
+P + +++ + LS +RK ++ CA R + + + ++ E ++++
Sbjct: 843 MPTVKSTDVAATLSHALSVRDVRKNIRRKICAVRRGAEANEDEYVLNPSYRFEHEKEVQR 902
Query: 879 LAYPEHVCSYESM---------------QAGLYRLKHLGITQLTLPASISSAMSQLPDEA 923
+A PE VC+YES Q + RL L + QL +I S E
Sbjct: 903 MATPEEVCAYESYRHAVAVLCKDRDRDEQERILRLSSLSLQQLKNAVTILIRHS----EG 958
Query: 924 IALAAASHIERELQITPWNLSSNFVACTNQDR--------ENIERLEITGVGDPSGRGLG 975
++E LQI PW + F+ + + I+RL G
Sbjct: 959 KRKRQLENLELWLQIQPWAQTHEFLQASLGTKGILHLETSRRIQRLT----------GKF 1008
Query: 976 FSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLRRLSMEAAREVLLKFNVPEEMIA 1035
++Y+R + +V ++ R TVTGT+ADLR+L+M A+ +L F V +E+I
Sbjct: 1009 YNYIR---RMTVPDPPEDRR--PRREPGTVTGTNADLRKLTMPQAQRILENFGVEKEVIL 1063
Query: 1036 KQTRWHRIAMIRKLSSEQAASGVQLQQQTRGKCQEIWDRQVQSLSAADDDEIGSDSEHSD 1095
+ RW RI +IR+LS A G R + L ++ D++ EHSD
Sbjct: 1064 RLERWKRIGLIRELSGAATADGTN--------SHAGMARFARRLRVSEADQLKEIREHSD 1115
Query: 1096 L 1096
L
Sbjct: 1116 L 1116
>gi|384499093|gb|EIE89584.1| hypothetical protein RO3G_14295 [Rhizopus delemar RA 99-880]
Length = 1114
Score = 192 bits (488), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 157/522 (30%), Positives = 240/522 (45%), Gaps = 98/522 (18%)
Query: 528 NRDMMEGSWLDNIIW--EPVDAVGKPKLILDLQDEQMLFEILDNKDDEHPLLHAGAMIIT 585
N ++ E SWL IIW E +DA K+ LDL D MLF++ + + + L+ +
Sbjct: 332 NMELEEDSWLQAIIWDKEKIDAETM-KISLDLNDPNMLFDVEEVEATKELLIQPKHVKKG 390
Query: 586 RSAKPSDFKPAESVKLFYLGKELEDHKSLA--------DQNVRPNSLIHLIRTKI----- 632
R P +P ++++++ E+E H L D++ + L+R +
Sbjct: 391 RKPIP---RPLPKIQVYHV--EIEPHNKLPLNRFNLSNDKHYETHLAGRLVRVRQTFGQL 445
Query: 633 ---HLLPRAQKLPG---------ENKSLRPP----------------------------- 651
H LP + P E +S P
Sbjct: 446 IVQHALPALKLHPAFYKTKLSKAELRSFHRPLIQLPSNTDIHFSRMKVSKKKRDKKKGYI 505
Query: 652 GAFKKKSDLSVKDGHVF-LMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGN 710
+ DL++KD F LMEY EE P ++SN GMG + YY+K+ P D+ + S +
Sbjct: 506 DPIRTTKDLTLKDSTPFVLMEYSEENPPIISNIGMGTLVVNYYRKTEPKDE---FVPSAD 562
Query: 711 NCLGNVLTLEPGDKSPFL--GDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRS---A 765
+G L+ GD SPF+ G+++ G + S N+ RAP+F H+V TDFLL++S +
Sbjct: 563 --IGEPFVLDIGDTSPFMNFGNVEPGQTISVYYNNLIRAPIFRHEVKRTDFLLLKSTYKS 620
Query: 766 KGKISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCI 825
+ K +R I + + Q P+ EV P S+ + T +R+ V YR KR +
Sbjct: 621 QTKYYLREIPAIFTIGQSYPVQEVPGPHSRKVTTIIKSRLQVAAYR----LIKRSPSHRL 676
Query: 826 GVDELSVQFPNLSEAIIRKKLKE-CAFLRR--DGNGKQVWSMKRTFHIPSEGDLRKLAYP 882
+ L+ +FP S+ IR++LKE F RR DG G W + P E DLRK+ P
Sbjct: 677 KMGRLAQKFPEYSDIQIRQRLKEFLEFHRRNKDGGGG-YWKTRGGSDPPDEEDLRKMVTP 735
Query: 883 EHVCSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWN 942
E +C YESM G L+ LG + DE A S++E E Q+ PW
Sbjct: 736 EMICLYESMLVGERHLQDLGYGDMN-------------DEDEAGEGESNLEVEQQLAPWF 782
Query: 943 LSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPK 984
+ NF+ T + L++ G GDP+GRG GFS++R + K
Sbjct: 783 STRNFINAT----QGKAMLKLYGAGDPTGRGEGFSFIRVSMK 820
>gi|313222602|emb|CBY41641.1| unnamed protein product [Oikopleura dioica]
Length = 986
Score = 192 bits (487), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 122/370 (32%), Positives = 194/370 (52%), Gaps = 38/370 (10%)
Query: 726 PFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRRIDKVAVVAQQEP 785
PFLG + A SQS+ E +M+R P+F H + TDFLL+R+ + +R + + ++ QQ P
Sbjct: 20 PFLGQVNADSSQSAFENDMFRCPLFYHNTSKTDFLLIRN-EDTWCLREVPETFLLGQQCP 78
Query: 786 LMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLSEAIIRKK 845
L++V P SK ++S + +LV +YR F + + I ++E+ FP LSE IRK+
Sbjct: 79 LIDVPGPNSKKATSFSRDFLLVFLYRLFLNSTVQP--KKIRMEEVRKAFPALSEGSIRKR 136
Query: 846 LKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRLKHLGITQ 905
LK+CA +R G W + + +P+E ++R PE C++ SM A RLK G +
Sbjct: 137 LKQCAEFKRTGIDSNWWVLASDYRLPTEEEIRAHVKPEEACAFYSMLAAEQRLKDAGYRE 196
Query: 906 LTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENIERLEITG 965
+L DE AS ++ E+ PW+ + F+A +N L+ITG
Sbjct: 197 KSL----------FLDEKDDEDEASKMDIEILCAPWHTTRAFLAAM----KNKCLLDITG 242
Query: 966 VGDPSGRGL-GFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLRRLSMEAAREVL 1024
DP+G+ GFSYV+ K + + + + VTGTDADLRRL+++ A+++
Sbjct: 243 AADPTGQAREGFSYVKIPSKPN-----QRDENTPAQPKKLVTGTDADLRRLNLKQAKDMC 297
Query: 1025 LKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG-VQLQQQTRG--------------KCQ 1069
K+ V + ++ K TRW I M+R LS+ QA G + + RG +CQ
Sbjct: 298 RKWGVSDAVMNKLTRWEVIDMVRTLSTRQARVGDTSVSKFARGNRFSAAEHHERYKEECQ 357
Query: 1070 EIWDRQVQSL 1079
+ +D Q + L
Sbjct: 358 QRFDLQAKQL 367
>gi|50557428|ref|XP_506122.1| YALI0F32153p [Yarrowia lipolytica]
gi|49651992|emb|CAG78936.1| YALI0F32153p [Yarrowia lipolytica CLIB122]
Length = 1080
Score = 189 bits (481), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 126/382 (32%), Positives = 192/382 (50%), Gaps = 41/382 (10%)
Query: 619 VRPNSLIHLIRTKIHLLPRAQKLPGENKSLRPPGAFKKKSDLSVKD-GHVFLMEYCEERP 677
V+PN+ +H R KI R + P ++ K +DLS+ D FLMEY E+ P
Sbjct: 489 VKPNTTVHFSRMKIRKKKRDRGKPIKD-------LLAKTTDLSLGDSAQYFLMEYAEQFP 541
Query: 678 LLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLTLEPGDKSPF--LGDIKAGC 735
+ LSN GMG+ + YY+K+SP D + L G +VL+++ DKSPF G ++ G
Sbjct: 542 MTLSNYGMGSKMINYYRKASPEDTSRPKLPVGET---HVLSVQ--DKSPFWNFGFVEPGK 596
Query: 736 SQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKIS-------IRRIDKVAVVAQQEPLME 788
+L M RAPVF H TDFL++RS G ++ +R I V V Q P+ +
Sbjct: 597 IVPTLYNKMIRAPVFKHTPRDTDFLMIRSTGGDVTGAGQKYFLRNIPHVFTVGQTYPVTD 656
Query: 789 VMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLSEAIIRKKLKE 848
V P S+ + T S NR+ + VYR +A+ I V +++ FP+ + R++LKE
Sbjct: 657 VPGPHSRKVTTASKNRLKMIVYRVLNASPYH----RINVKDIAEHFPDQIDTQNRQRLKE 712
Query: 849 CAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRLKHLGITQLTL 908
+R G + W +K T +P E +R + PE + E+MQ G+ L+ G +
Sbjct: 713 FMEYQRTGEDQGYWKVKPTDTLPGEDGIRTMITPEDITLLEAMQVGVQNLEDAGYGRTD- 771
Query: 909 PASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENIERLEITGVGD 968
I S + ++L E Q PWNL+ NF+ T + L++ G GD
Sbjct: 772 --DIESDHENGEESGLSL--------EEQSAPWNLTRNFINAT----QGKAMLQLHGEGD 817
Query: 969 PSGRGLGFSYVRAAPKASVSSA 990
PSGRG GFS+++ + K +A
Sbjct: 818 PSGRGEGFSFLKTSMKGGFQAA 839
>gi|413954631|gb|AFW87280.1| hypothetical protein ZEAMMB73_604430 [Zea mays]
Length = 353
Score = 189 bits (479), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 128/264 (48%), Positives = 163/264 (61%), Gaps = 26/264 (9%)
Query: 27 GGNRLLGFMFGNVDYAGDLDVDYLDEDAKEHLAAVADKLGPSLTDIDVWNSQSCFQLFCS 86
GGN LLGFMFGNVD +GDLD DYLDEDAKEHL A+ADKLGPSL DID+ S
Sbjct: 91 GGNHLLGFMFGNVDDSGDLDADYLDEDAKEHLFALADKLGPSLKDIDLMKS--------- 141
Query: 87 YCLLSVNSPQPPVDAVEQDYDKKAEDAVDYEDIDEQYEGPEIQIASEEDYLLPKKEYFAA 146
SP P D EQDYD+KAEDAVDYEDIDE+Y+GPE++ +EED +L KK+YF++
Sbjct: 142 -------SPA-PTDPSEQDYDEKAEDAVDYEDIDEEYDGPEVEATTEEDNVLSKKDYFSS 193
Query: 147 EVSLAALKPTASPFDDENYDEDEELEKEHEEVDKETEDTTTILSGEQVECATAVPDGEKS 206
A++ T S FDDENYDE+EE ++E + +S EQ + T+ +
Sbjct: 194 STVYASVNSTVSVFDDENYDEEEEPPNDNEPPGDSAAQNLSSVSIEQADTTTSSDNLAME 253
Query: 207 PEGDPQVGSLG-AEEEMTAGVKDYDEELADILKGPLDGQVSTPLPVLCVEDGKVILRFSE 265
++G L EE M +D + E +G L+ + +T LPVLC+EDG ILRFSE
Sbjct: 254 -----KIGLLSHPEENMDFEYEDLENEKG-TGEGQLEPESATSLPVLCIEDGNAILRFSE 307
Query: 266 IFGIHEPLKKGKKRDQRYSTPKDK 289
IFGI EP++K K + P DK
Sbjct: 308 IFGIQEPVRKVKT--DHHKRPVDK 329
>gi|320580704|gb|EFW94926.1| transcription initiation factor TFIID, putative [Ogataea
parapolymorpha DL-1]
Length = 1045
Score = 187 bits (474), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 144/451 (31%), Positives = 229/451 (50%), Gaps = 50/451 (11%)
Query: 619 VRPNSLIHLIRTKIHLLPRAQKLPGENKSLRPPGAFKKKSDLSVKD-GHVFLMEYCEERP 677
VRPN+++ + K R +K +K P F++ SDL++ D + F++EY EE P
Sbjct: 419 VRPNTIMVFSKVKT----RKKK---RDKGKEPREIFRESSDLTLGDSANFFMLEYSEENP 471
Query: 678 LLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLTLEPGDKSPF--LGDIKAGC 735
++L+N GM + L YY+K + D L G +VL L+ D+SPF G ++ G
Sbjct: 472 IVLNNFGMCSKLINYYRKLNDDDTMRPKLPVGET---HVLGLQ--DRSPFWNFGYVEPGH 526
Query: 736 SQSSLETNMYRAPVFTHKVATTDFLLVRSAKG----KISIRRIDKVAVVAQQEPLMEVMS 791
+L M RAP+F H+ +TDFLL+RS+ G + +R ++ V V Q P+MEV
Sbjct: 527 IVPTLYNRMIRAPIFKHEPLSTDFLLIRSSGGGSSQRFFLRPVNYVFTVGQTLPVMEVPG 586
Query: 792 PGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLSEAIIRKKLKECAF 851
P S+ + S NR+ + VYR + +R LL V +++ FP+ ++ R++LKE
Sbjct: 587 PHSRKVTATSKNRLKMVVYRVLNRNEERRLL----VRDIADHFPDQNDMQNRQRLKEFME 642
Query: 852 LRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRLKHL-GITQLTLPA 910
+R GN + W +K T +P+ ++R + PE + ++MQAG RL+ L + L
Sbjct: 643 YQRSGNDQGYWKVKLTDTLPNYEEIRNIVSPEDIALLDAMQAGNQRLEDLESYKRERLEE 702
Query: 911 SISSAMSQLPDEAIALAAASHIEREL---------QITPWNLSSNFVACTNQDRENIERL 961
+A L ++ A A S ER+L Q+ PWN++ NFVA T+ L
Sbjct: 703 GTPNA--SLTVQSPANEAGSKKERDLMANDGPLSVQLAPWNITRNFVAATHGK----AML 756
Query: 962 EITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTV---TGTDADLRRLSME 1018
+I G GDPSGRG FS++R + K K AAN V D + ++ S+
Sbjct: 757 QIYGEGDPSGRGEAFSFLRTSMKGGFI------KNAANLSEEIVLPPKNPDKEEKKSSIT 810
Query: 1019 AAREVLLKFNVPEEMIAKQ--TRWHRIAMIR 1047
V ++ + E+ IAK +W ++ R
Sbjct: 811 HTYNVAIQQKIYEKEIAKVWFKQWKALSKTR 841
>gi|342320608|gb|EGU12547.1| Atypical/TAF1 protein kinase [Rhodotorula glutinis ATCC 204091]
Length = 1147
Score = 184 bits (466), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 205/731 (28%), Positives = 320/731 (43%), Gaps = 130/731 (17%)
Query: 526 LQNRDMM--EGSWLDNIIWE---PVDAVGKPKLILDLQDEQMLFEILDNKDDEHP----- 575
LQ+R+ + G W+ +I+W+ P A +L L+L D +ML E+ KDD P
Sbjct: 322 LQHRNALFDGGDWVKSILWDGENPARAEYFTRLNLNLNDTEMLLEVHQPKDDNAPKRIAP 381
Query: 576 --LLHAGAMIITRSAKPSDFKPAESVKLFYLGKELEDHKSLADQNVRPNSLIHLIRTKIH 633
L + M+ R A F + K + + KE + + Q ++H +
Sbjct: 382 KNALGSAEMLAPRDANLDPFNLSND-KEYEVPKE--QKRQIIRQTFGALEVVHAYPAQKL 438
Query: 634 LLP--RAQKLPGENKSLRPPG----------------------------------AFKKK 657
LP + + E +S P A +
Sbjct: 439 QLPFYKTRLSKNETRSFHRPALQFPQNIPIGFTKVRSKKKKDKHGRKIKKSEGAEALRGM 498
Query: 658 SDLSVKDGHVFLM-EYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNV 716
D+++KD F++ EY EE P ++SN GMG+ + YY+K SP D L +G
Sbjct: 499 QDITLKDTSNFVLWEYSEEHPPIISNVGMGSIIVNYYRKKSPEDTFIPHLE-----VGQP 553
Query: 717 LTLEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVR---SAKGKISI 771
L LE D+SPF G + G + ++L N+ RAP+F H+ TDFL+VR + I
Sbjct: 554 LLLEGTDESPFKMFGFVHPGQTVTTLYNNLIRAPLFRHQPNETDFLVVRVTIDGETHYYI 613
Query: 772 RRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELS 831
R I + VV Q P +EV P S+ + T NR++ ++ A K I V L+
Sbjct: 614 RSIPHLYVVGQTYPQIEVPGPHSRKVTTLQKNRLMTIAFK-LVAKNKDS---RIKVHRLT 669
Query: 832 VQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESM 891
FP+ ++ +R+KLKE R G+ + W +K + HIPSE ++ K+A PE VC ESM
Sbjct: 670 RYFPDHNDLQMRQKLKEFMEFVRKGDNQGFWMIKPSVHIPSEAEMLKMAEPETVCLAESM 729
Query: 892 QAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACT 951
Q GL L+ G T +SA +E A S ++ E Q+ PW + NFV
Sbjct: 730 QVGLRTLQDAGYT--------NSA-----EEGGAGEDDSKLDIEQQLAPWITTKNFVNAN 776
Query: 952 NQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDAD 1011
N L++ G GDP+GRG FS++R + K R G T+ AD
Sbjct: 777 ----ANKAMLKLHGEGDPTGRGEAFSFLRTS-----------MKDIFLRAGETMEERLAD 821
Query: 1012 LRRLSMEAAREVLLKFNVPE------EMIAK--QTRWHRIAMIRK--LSSEQAASGVQLQ 1061
+ A K+NV E E IA+ +++W ++ R+ L+ E +
Sbjct: 822 MANRPKSAH-----KYNVQEQQEIYKEEIARIWKSQWDSLSQKREPLLTQED-------E 869
Query: 1062 QQTRGKCQEIWDRQVQSLSAADDDEIGSDSEHSDLDSFAGDLENLLDAEEFEEEESNYDT 1121
+ RG+ ++L+A+ D GS + G +D ++ S +T
Sbjct: 870 DRHRGRLIAAKKAANKALAASAVDTPGSAANTPARAGTPGSRAGSVDLDDAASVASGRNT 929
Query: 1122 KHDKVEGVKGLKMR-------RRPIQVQA----EEEIEDEAAEAAELCRLLMDDDEAELK 1170
K +K L M R P ++A I++E EA E LL DDE++ +
Sbjct: 930 GKTKTLRIKRLVMGKWETEIVRDPSVIKAYVHQRALIDEEKLEANE---LLPSDDESKNE 986
Query: 1171 KKKKKTKAQVE 1181
++KK+ K Q+E
Sbjct: 987 RRKKRLKEQLE 997
>gi|432109230|gb|ELK33573.1| Transcription initiation factor TFIID subunit 1 [Myotis davidii]
Length = 1085
Score = 182 bits (462), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 122/355 (34%), Positives = 182/355 (51%), Gaps = 37/355 (10%)
Query: 771 IRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDEL 830
IR + + VV QQ PL EV P SK T+ + + V +YR F +A R I ++++
Sbjct: 324 IRELVDIFVVGQQCPLFEVPGPNSKRANTHIRDFLQVFIYRLFWKSADRPRR--IRMEDI 381
Query: 831 SVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYES 890
FP SE+ I K+LK CA +R G W +K F +P+E ++R + PE C+Y S
Sbjct: 382 KTAFPCHSESSIWKRLKLCADFKRTGMDSNWWVLKSDFRLPTEEEIRAMVSPEQCCAYYS 441
Query: 891 MQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVAC 950
M+A RLK G + + A P++ + E++ PWN + F+A
Sbjct: 442 MRAAEQRLKDAGYGEKSFFA---------PEKENEEDFQMKTDDEVRTAPWNTTRAFIAA 492
Query: 951 TNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDA 1010
+ LE+TGV DP+G G GFSYV+ K + K TVTGTDA
Sbjct: 493 M----KGKCLLEVTGVADPTGCGEGFSYVKIPNKPTQQ----KDDKEPQPVKKTVTGTDA 544
Query: 1011 DLRRLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG------------- 1057
DLRRLS++ A+++L KF VPEE + K +RW I ++R +S+EQA SG
Sbjct: 545 DLRRLSLKNAKQLLHKFGVPEEEMKKLSRWEVIDVVRTVSTEQAHSGEGPMSKFARGSRF 604
Query: 1058 --VQLQQQTRGKCQEIWDRQVQSLSAAD---DDEIGSDSEHSDLDSFAGDLENLL 1107
+ Q++ + +CQ I+D Q + LS+ + D S +E SD + +EN+L
Sbjct: 605 SVAEHQERYKEECQRIFDLQNKVLSSTEVLSTDTDSSSAEDSDFEEMGKAIENML 659
>gi|384485514|gb|EIE77694.1| hypothetical protein RO3G_02398 [Rhizopus delemar RA 99-880]
Length = 1109
Score = 181 bits (459), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 155/523 (29%), Positives = 234/523 (44%), Gaps = 99/523 (18%)
Query: 528 NRDMMEGSWLDNIIWEPVDAVGKP-----KLILDLQDEQMLFEILDNKDDEHPLLHAGAM 582
N + +G WL IIW+ KP K+ LDL D MLF++ + + + L+ +
Sbjct: 328 NMQLEDGDWLQAIIWDK----EKPQTETMKISLDLNDPNMLFDVKEVEATKELLIQPKHV 383
Query: 583 IITRSAKPSDFKPAESVKLFYLGKELEDHKSLA------DQNVRPNSLIHLIRTKI---- 632
R P KP +++++ E D L D++ + L+R +
Sbjct: 384 KKGRKPIP---KPLPKIQIYHTETEPHDKLPLNRFNLSNDKHYETHLAGRLVRVRQTFGQ 440
Query: 633 ----HLLPRAQKLPGENKSL----------RP----PG---------------------- 652
H LP + P KS RP P
Sbjct: 441 LVVQHALPALRLHPALYKSKLSKAELRSFHRPLIQLPANTDIHFSRVKASKKKKKDKKKG 500
Query: 653 ---AFKKKSDLSVKDGHVF-LMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCS 708
A + DL++KD F LMEY EE P ++SN GMG + YY+K+ P D+
Sbjct: 501 HIEAIRSTKDLTLKDNSPFVLMEYSEENPPIISNMGMGTLIVNYYRKTEPKDE-----FV 555
Query: 709 GNNCLGNVLTLEPGDKSPFL--GDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSA- 765
N +G L+ GD SPF+ G+++ G + S N+ RAP+F H++ TDFLL++S
Sbjct: 556 PNVDIGEPFVLDIGDTSPFMNFGNVEPGQTISVYYNNLIRAPLFRHELKHTDFLLIKSTY 615
Query: 766 KG--KISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLP 823
KG K +R I + + Q P+ EV P S+ + T NR+ V YR KR
Sbjct: 616 KGQTKYYLREIPAIFTIGQSYPVQEVPGPHSRKVTTIIKNRLQVVAYR----LIKRNPAY 671
Query: 824 CIGVDELSVQFPNLSEAIIRKKLKE-CAFLRR-DGNGKQVWSMKRTFHIPSEGDLRKLAY 881
+ + L+ +FP S+ +R++LKE F RR G G W + P E +LRK+
Sbjct: 672 KLKMGRLAQKFPEYSDIQLRQRLKEFLEFHRRHKGGGGGYWKTRGGADPPDEEELRKMVT 731
Query: 882 PEHVCSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPW 941
PE +C YESM G L+ LG + DE + S++E E Q+ PW
Sbjct: 732 PEMICLYESMLVGERHLQDLGYGDVN-------------DEDESNEGESNLEVEQQLAPW 778
Query: 942 NLSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPK 984
+ NF+ + + L++ G GDP+GRG GFS++R + K
Sbjct: 779 FSTRNFINAS----QGKAMLKLYGAGDPTGRGEGFSFIRVSMK 817
>gi|326430425|gb|EGD75995.1| hypothetical protein PTSG_00702 [Salpingoeca sp. ATCC 50818]
Length = 1814
Score = 178 bits (451), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 137/462 (29%), Positives = 215/462 (46%), Gaps = 58/462 (12%)
Query: 659 DLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLT 718
D++ K G V L EY EE P + GM + +++ PG L G ++
Sbjct: 615 DITAKTGRVVLAEYSEEHPFFIMRPGMCTVIRNFHR---PGPTPYKPLP-----YGILIP 666
Query: 719 LEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGK-ISIRRIDKV 777
+E D SPFLG + G + + E N++RAP + H + TDFL+ R+ + K + +R I +
Sbjct: 667 IEKVDGSPFLGRMARGQTVQAFENNLFRAPAYAHHMRGTDFLVTRNPQTKELHVRYIGDI 726
Query: 778 AVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGL-------LPCIGVDEL 830
VV Q P M + +P SK R+ VYR F R P + +D +
Sbjct: 727 FVVGQLMPKMALPAPNSKAASDLQRKRLEAFVYRMFFKRTVRSRKRRHRQERPRVRMDAV 786
Query: 831 SVQFPNLSEAIIRKKLKECAFLRRDG--NGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSY 888
P+ S+ IR+ LKECA +R G NG W + +P++ DL+ PE VC+Y
Sbjct: 787 KKAMPDQSDTNIRRVLKECAKFQRHGADNGSWEWKLD---SLPTKYDLQAKITPEEVCAY 843
Query: 889 ESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIER---------ELQIT 939
ESM A RL+ +G + + A + E E ++
Sbjct: 844 ESMLAAEQRLRDMGYKTALIAEAADEARKEPTRNEGDDDEDGDKESGGDGTGAVDEAKVA 903
Query: 940 PWNLSSNFVACTNQDRENIERLEITGVGDPSGRG--LGFSYVRAAPKASVSSAMVKKKAA 997
PW LS +FV C ++ L I G DP+G G LG SYVR A K S+A V A
Sbjct: 904 PWCLSQDFVDCV----QSKCLLAIVGSADPTGTGGKLGMSYVRIAKKP--SNARVHDPNA 957
Query: 998 ANRGGSTVTGTDADLRRLSMEAAREVLL-KFNVPEEMIAKQTRWHRIAMIRKLSSEQA-A 1055
+ V DLR+L +E AR++L+ ++ + + + RWH I ++R+ ++E+A
Sbjct: 958 KKKSDDAV-----DLRKLPLELARKILIERYGMTDAELEGIPRWHVIGIVRRKATEEAKT 1012
Query: 1056 SGVQL-------------QQQTRGKCQEIWDRQVQSLSAADD 1084
S V+L +++ +CQ +D Q SL++ ++
Sbjct: 1013 SSVELDYARNSNSAVAMHRRKFESRCQAAFDGQNGSLASIEE 1054
>gi|387593982|gb|EIJ89006.1| hypothetical protein NEQG_00825 [Nematocida parisii ERTm3]
gi|387595817|gb|EIJ93440.1| hypothetical protein NEPG_01782 [Nematocida parisii ERTm1]
Length = 880
Score = 176 bits (446), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 129/342 (37%), Positives = 175/342 (51%), Gaps = 39/342 (11%)
Query: 649 RPPGAFKKKSDLSVKDGHVF-LMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLC 707
+P KKK +L+++D F L+EY EE P L+ +GM + + T+Y+KS+ D
Sbjct: 306 KPSSILKKKKELTLRDTADFVLLEYSEEIPPLIMKSGMASIITTFYRKSTSKDNP----- 360
Query: 708 SGNNCLGNVLTLEPGDKSPFL--GDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSA 765
S +G++ LEP D SPFL GD++ + S + N+Y+AP+ H A+ D + +R
Sbjct: 361 SFEPEIGSLTVLEPKDPSPFLFIGDVQPNEAISGVVNNLYKAPLAFH--ASKDLIAIRPK 418
Query: 766 KGKIS--IRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREF-SAAAKRGLL 822
K S IR ID V V Q PL E SP S+ + NRM V YR F K +
Sbjct: 419 GEKTSYYIRTIDSVGCVGQTLPLDEAFSPHSRRHNVFCKNRMKVAAYRLFYEKGNKERKM 478
Query: 823 PCIGVDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYP 882
+DEL FP+ SE RK LKE + + G VW +K + + SE DLR+ P
Sbjct: 479 YIYQLDEL---FPHFSEGSKRKWLKEYSECIKKGKD-NVWVLKPSASLLSEEDLRRAVTP 534
Query: 883 EHVCSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWN 942
E VC YESM A RLK GI ++S + D+ EL++T WN
Sbjct: 535 EKVCQYESMLAEERRLKDAGIV-------LASVEEEAGDDD-----------ELKLTVWN 576
Query: 943 LSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPK 984
+ NFV TN LEITG GDP+G G GFS+VRA K
Sbjct: 577 CTRNFVNATNGK----GILEITGAGDPTGIGEGFSFVRARRK 614
>gi|393218180|gb|EJD03668.1| TAF1, transcription initiation factor TFIID, subunit TAF1
[Fomitiporia mediterranea MF3/22]
Length = 1069
Score = 173 bits (438), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 113/338 (33%), Positives = 172/338 (50%), Gaps = 33/338 (9%)
Query: 653 AFKKKSDLSVKDGHVFLM-EYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNN 711
++ SDLS+KD F++ E+ EE P ++S+ GMG+ L YY+K D+
Sbjct: 411 GLRRTSDLSLKDSSNFVLWEFSEEHPPIISDFGMGSVLVNYYRKKDDKDE-----YIPKA 465
Query: 712 CLGNVLTLEPGDKSPFL--GDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVR-SAKGK 768
LG LEPGD+SPF+ G + G + +L N+ RAP+F K TDFL+VR + +G+
Sbjct: 466 DLGEPFVLEPGDESPFMKFGSVYPGQTVQALYNNLLRAPLFRQKAYPTDFLVVRNTTRGE 525
Query: 769 IS--IRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIG 826
+ IR I + VV Q P+ EV P S+ + T NR+ V ++ + L
Sbjct: 526 ATYQIREIKSLFVVGQTYPVTEVPGPHSRKITTTIKNRLQVIAFKLLKKSQGERL----K 581
Query: 827 VDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVC 886
+ L FP+ +E +R++LKE R G + W +K T IPS+GD+ K+ PE V
Sbjct: 582 ISRLMKYFPDQNELQMRQRLKEFMEYHRRGPHQGFWRLKETVTIPSDGDMLKMVSPEQVV 641
Query: 887 SYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSN 946
ESMQ G+ L+ G ++ ++ DE S++ E Q+ PW + N
Sbjct: 642 LAESMQVGMRHLQDAGY-------GGAAETAKDDDE-------SNLSIEQQLAPWITTKN 687
Query: 947 FVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPK 984
F+ T L + G GDP+GRG FS++R + K
Sbjct: 688 FLQATQAK----AMLRLHGEGDPTGRGEAFSFIRVSMK 721
>gi|123492936|ref|XP_001326171.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121909082|gb|EAY13948.1| hypothetical protein TVAG_490860 [Trichomonas vaginalis G3]
Length = 1016
Score = 172 bits (436), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 136/467 (29%), Positives = 210/467 (44%), Gaps = 67/467 (14%)
Query: 660 LSVKDGH-VFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLT 718
LS ++G + L+E+ E P + N GM + L TYY +++ D +L+ S + +
Sbjct: 387 LSGRNGRKLILLEHTSENPAFILNVGMASRLITYYHQATAEDIPRSLIESDTHLI----- 441
Query: 719 LEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKG--KISIRRIDK 776
+P SPFL I ++ NM+ PV H V TDFLL+R + K IR ID
Sbjct: 442 -KPNQASPFLASIPKSTPIHTISCNMFDVPVAKHDVEPTDFLLIRDMEDNRKFYIRHIDA 500
Query: 777 VAVVAQQEPLMEVMSPGSKNLQTYSIN---RMLVNVYREFSAAAKRGLLPCIGVDELSVQ 833
+ E ++VM P K QT+ N +LVN++R R + V L
Sbjct: 501 TYCASLLEARVKVMRPNKKVTQTFITNFITAILVNIFRGNKQYKGRSRIQVSSV--LKEF 558
Query: 834 FPNLSEAIIRKKLKECA-FLRRDGNGKQVWSMKRTFHIPSEGDLRKL-----AYPEHVCS 887
FP+++E +R+ LK+ A R G+G W P E DL PE VCS
Sbjct: 559 FPDMNELKLREVLKKFAKNYREQGSG--YWE-------PVEKDLDAFFGTIQITPEDVCS 609
Query: 888 YESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNF 947
Y+SMQAG +L+ G+ L + + L E + A IE EL TPW + NF
Sbjct: 610 YQSMQAGFKKLRRSGVNMLIRSKRVYQQIQNLKGE-LTKKVAEKIELELMKTPWARTENF 668
Query: 948 VACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTG 1007
+ + R + G VR + S A +K+ R G
Sbjct: 669 TKAFDGQLMEMSRADT-----------GEQIVRTKGRRGKSEAGEQKEPKKQR-----YG 712
Query: 1008 TDADLRRLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASGVQLQ---QQT 1064
TDADLR L + E L + +PEE IA+ RW ++ ++R+++S Q G+Q + +
Sbjct: 713 TDADLRVLHIPQLNEKLRSYGIPEEQIARLLRWDKVKLLREITSNQMKEGIQTEDTLKYA 772
Query: 1065 RGKCQEIWDRQ--------------VQSLSAADDDEIGSDSEHSDLD 1097
RG C + +++ +Q +S++ D DSE+ D++
Sbjct: 773 RGPCNQYQEKKEQYKKVYEESFKTNLQYISSSKKD----DSEYQDME 815
>gi|393244638|gb|EJD52150.1| hypothetical protein AURDEDRAFT_181675 [Auricularia delicata
TFB-10046 SS5]
Length = 1099
Score = 172 bits (435), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 113/337 (33%), Positives = 173/337 (51%), Gaps = 34/337 (10%)
Query: 654 FKKKSDLSVKDGHVF-LMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNC 712
+ +DL++KD F L+EY EE P ++SN GMG L YY+K S D+ L
Sbjct: 433 LRTTADLTLKDTSSFVLLEYSEEHPPVMSNYGMGNILVNYYRKKSDLDETIPKLE----- 487
Query: 713 LGNVLTLEPGDKSPFL--GDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSA---KG 767
LG LEP D+SPFL G+++ G +L N+ RAP+F H+ TDFL+++S+ +
Sbjct: 488 LGEPFVLEPQDESPFLKFGNVEPGKVIPALYNNLIRAPLFRHQAYPTDFLVIKSSTRGET 547
Query: 768 KISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGV 827
K IR I + +V Q P+ +V P S+ + T NR+ + Y+ + L +
Sbjct: 548 KYYIREIKNIFIVGQTYPVTDVPGPHSRKITTTLKNRLQLIAYKLLKKSPGERL----KI 603
Query: 828 DELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCS 887
L FP+ +E +R++LKE R G + W +K IPSE ++ K+ PE V
Sbjct: 604 SRLMKYFPDQNELQMRQRLKEFMEYHRRGTHQGFWRLKNNGQIPSESEMLKMLTPEQVVL 663
Query: 888 YESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNF 947
ESMQ G L+ LG + A ++ DE S ++ E Q+ PW + NF
Sbjct: 664 SESMQVGQRHLQDLGYGR--------GADAEDGDE-------SKLDIEQQLAPWITTKNF 708
Query: 948 VACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPK 984
+ T ++ L++ G GDP+GRG FS++R + K
Sbjct: 709 MNAT----QSKAMLKLHGAGDPTGRGEAFSFIRVSMK 741
>gi|363753960|ref|XP_003647196.1| hypothetical protein Ecym_5644 [Eremothecium cymbalariae DBVPG#7215]
gi|356890832|gb|AET40379.1| hypothetical protein Ecym_5644 [Eremothecium cymbalariae DBVPG#7215]
Length = 1027
Score = 171 bits (434), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 125/400 (31%), Positives = 201/400 (50%), Gaps = 48/400 (12%)
Query: 611 HKSLADQNVRPNSLIHLIRTKIHLLPRAQKLPGENKSLRPPGAFKKKSDLSVKDG-HVFL 669
H+ + +RP + +++ +KI L R + + K +R F + SDL+V D VFL
Sbjct: 423 HRYHFGKTIRPGT--NIVFSKIKLRKRKR---DKGKDVRE--IFSQSSDLTVGDSVPVFL 475
Query: 670 MEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLTLEPGDKSPF-- 727
+EYCE+RP+ LS GM + L YY+K S D + L G +VL ++ DKSPF
Sbjct: 476 IEYCEQRPVALSKFGMASKLINYYRKRSETDTSRPKLPVGET---HVLGVQ--DKSPFWN 530
Query: 728 LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKG----KISIRRIDKVAVVAQQ 783
G ++ G +L NM RAPVF H+V+ TDFLL++SA + +R I+ + V Q
Sbjct: 531 FGFVEPGTIVPTLYNNMLRAPVFKHEVSRTDFLLIKSAGNGSGTRFYLRHINNLFTVGQT 590
Query: 784 EPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLSEAIIR 843
P++E+ P S+ + + NR+ + VYR + + + LL V +++ FP+ ++ R
Sbjct: 591 FPVVEIPGPNSRKVTSMGKNRLRMVVYRILNKSPEHRLL----VKQVARHFPDQNDMQNR 646
Query: 844 KKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRLKHLGI 903
++LKE +RDG+ W +K + +++K+ PE V ESM AG + +
Sbjct: 647 QRLKEFMKYQRDGDDHGFWKLKEGEVLLDNENVKKMISPEDVSLIESMYAGQQFQEDTDL 706
Query: 904 TQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENIERLEI 963
L + L E +TPWN + NF+ T Q R I +I
Sbjct: 707 FNFNL------KLRNL---------------EESLTPWNATKNFLNAT-QMRAMI---QI 741
Query: 964 TGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGS 1003
G GDP+G G GFS+++ + K + + ++ A G S
Sbjct: 742 HGAGDPTGNGEGFSFLKTSMKGGFTKSDESEQPQATGGHS 781
>gi|403347684|gb|EJY73274.1| Transcription initiation factor TFIID subunit 1 [Oxytricha trifallax]
Length = 2271
Score = 171 bits (434), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 145/487 (29%), Positives = 230/487 (47%), Gaps = 69/487 (14%)
Query: 627 LIRTKIHLLPRAQ--KLPGENKSLRPPGAFKKKSDLSVKDGHVFLMEYCEERPLLLSNAG 684
I+ K+ +L Q K P + + F+ + LS+KDG + E+ +++PL ++N G
Sbjct: 1031 FIQMKMKVLSHDQVDKRPKKVGIINAHEFFRDRIKLSLKDGKFCVFEHIDQQPLFINNFG 1090
Query: 685 MGANLCTYYQKSSPGDQAGALLCSGNNCL------GNVLTLEPGDKSPFLG--DIKAGCS 736
M + L Y + L N G + + G+K P LG D K
Sbjct: 1091 MASKLKKYLYSDKFLPDSAFLKRRENQGTRHMGPHGAQILKKKGEKIPLLGQIDTKYIKG 1150
Query: 737 QSSLETNMYRAPVFTHKVATTDFLLV----RSAKGKISIRRIDKVAVVAQQEPLMEVMSP 792
+ +E NMY PVF HK DFL V + I +R + ++ V+ Q+EP +EV +P
Sbjct: 1151 ITVMENNMYYCPVFYHKPQRNDFLCVLHRDKQQNASIVVRELSELYVMGQEEPKLEVYNP 1210
Query: 793 GSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLSEAIIRKKLKECAFL 852
S+ Q + I R R F EL+ F +++ I++K +KE +
Sbjct: 1211 QSRQYQHF-IKR------RTFQ--------------ELNKFFLYINDQILKKIIKEIN-V 1248
Query: 853 RRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRLKHLGITQLTLPASI 912
D N Q S+ ++ + R+L PE++C YES Q G LK +GI +T I
Sbjct: 1249 EVDRN--QYCSLNMEYN---DEQFRQLITPENICQYESAQYGEQMLKKVGIRDITNADKI 1303
Query: 913 SSAMSQL----PDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENIERLEITGVGD 968
S A ++ P++ L A IE E+ TPWNLS NF+ +++ + + G+GD
Sbjct: 1304 SYATNKFCSEEPNQKKQLIARI-IEEEVLSTPWNLSQNFI----HNKQTRGMMMLEGIGD 1358
Query: 969 PSGRGLGFSYVRAAPKASVSSAMVKKKAAANR--------GGSTVTGTDADLRRLSMEAA 1020
PS G+SY++ K S S KA NR VTGTDADLR+LS +
Sbjct: 1359 PSHGHGGYSYLKLPLKISQDSL---NKAKINRMYLNPAIQNPKAVTGTDADLRKLSKKEI 1415
Query: 1021 REVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASGV--QLQQQTRG------KCQEIW 1072
+ L+ EE I+ TRW +A++R SS+ + G+ ++++ RG K +E++
Sbjct: 1416 KNKLIDLGFKEEAISSFTRWEMVALLRDKSSQAVSQGMEGEMKKFARGVRFTSKKQREMY 1475
Query: 1073 DRQVQSL 1079
+QV +
Sbjct: 1476 QKQVNDI 1482
>gi|426396367|ref|XP_004064417.1| PREDICTED: transcription initiation factor TFIID subunit 1 [Gorilla
gorilla gorilla]
Length = 1812
Score = 171 bits (433), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 116/348 (33%), Positives = 174/348 (50%), Gaps = 46/348 (13%)
Query: 778 AVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNL 837
V P + + PG + LQ + +YR F + R I ++++ FP+
Sbjct: 743 TVYCHTSPFLGSLHPG-QLLQVF--------IYRLFWKSKDRPRR--IRMEDIKKAFPSH 791
Query: 838 SEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYR 897
SE+ IRK+LK CA +R G W +K F +P+E ++R + PE C+Y SM A R
Sbjct: 792 SESSIRKRLKLCADFKRTGMDSNWWVLKSDFRLPTEEEIRAMVSPEQCCAYYSMIAAEQR 851
Query: 898 LKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDREN 957
LK G + + A P+E I+ E++ PWN + F+A +
Sbjct: 852 LKDAGYGEKSFFA---------PEEENEEDFQMKIDDEVRTAPWNTTRAFIAAM----KG 898
Query: 958 IERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLRRLSM 1017
LE+TGV DP+G G GFSYV+ K + K TVTGTDADLRRLS+
Sbjct: 899 KCLLEVTGVADPTGCGEGFSYVKIPNKPTQQ----KDDKEPQPVKKTVTGTDADLRRLSL 954
Query: 1018 EAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------VQLQQ 1062
+ A+++L KF VPEE I K +RW I ++R +S+EQA SG + Q+
Sbjct: 955 KNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSKFARGSRFSVAEHQE 1014
Query: 1063 QTRGKCQEIWDRQVQSLSAAD---DDEIGSDSEHSDLDSFAGDLENLL 1107
+ + +CQ I+D Q + LS+ + D S +E SD + ++EN+L
Sbjct: 1015 RYKEECQRIFDLQNKVLSSTEVLSTDTDSSSAEDSDFEEMGKNIENML 1062
Score = 43.9 bits (102), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 40/93 (43%), Gaps = 11/93 (11%)
Query: 654 FKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCL 713
+ DL+ KDG + L EY EE L+ GM + YY K PG GA C
Sbjct: 686 MRTPQDLTGKDGDLILAEYSEENGPLMMQVGMATKIKNYY-KRKPGKDPGAPDCK----Y 740
Query: 714 GNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYR 746
G + SPFLG + G L+ +YR
Sbjct: 741 GETVYCH---TSPFLGSLHPG---QLLQVFIYR 767
Score = 40.4 bits (93), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 9/58 (15%)
Query: 521 FSKHSLQNRDMMEGSWLDNIIWEPVDAVGKPKLI------LDLQDEQMLFEILDNKDD 572
+S + N D++ G W DNIIW DA P+L+ LD DE ++ EI D K++
Sbjct: 486 YSIFPIDNEDLVYGRWEDNIIW---DAQAMPRLLEPPVLTLDPNDENIILEIPDEKEE 540
>gi|402910493|ref|XP_003917910.1| PREDICTED: transcription initiation factor TFIID subunit 1 [Papio
anubis]
Length = 1828
Score = 171 bits (432), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 116/348 (33%), Positives = 174/348 (50%), Gaps = 46/348 (13%)
Query: 778 AVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNL 837
V P + + PG + LQ + +YR F + R I ++++ FP+
Sbjct: 743 TVYCHTSPFLGSLHPG-QLLQVF--------IYRLFWKSKDRPRR--IRMEDIKKAFPSH 791
Query: 838 SEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYR 897
SE+ IRK+LK CA +R G W +K F +P+E ++R + PE C+Y SM A R
Sbjct: 792 SESSIRKRLKLCADFKRTGMDSNWWVLKSDFRLPTEEEIRAMVSPEQCCAYYSMIAAEQR 851
Query: 898 LKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDREN 957
LK G + + A P+E I+ E++ PWN + F+A +
Sbjct: 852 LKDAGYGEKSFFA---------PEEENEEDFQMKIDDEVRTAPWNTTRAFIAAM----KG 898
Query: 958 IERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLRRLSM 1017
LE+TGV DP+G G GFSYV+ K + K TVTGTDADLRRLS+
Sbjct: 899 KCLLEVTGVADPTGCGEGFSYVKIPNKPTQQ----KDDKEPQPVKKTVTGTDADLRRLSL 954
Query: 1018 EAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------VQLQQ 1062
+ A+++L KF VPEE I K +RW I ++R +S+EQA SG + Q+
Sbjct: 955 KNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSKFARGSRFSVAEHQE 1014
Query: 1063 QTRGKCQEIWDRQVQSLSAAD---DDEIGSDSEHSDLDSFAGDLENLL 1107
+ + +CQ I+D Q + LS+ + D S +E SD + ++EN+L
Sbjct: 1015 RYKEECQRIFDLQNKVLSSTEVLSTDTDSSSAEDSDFEEMGKNIENML 1062
Score = 43.9 bits (102), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 40/93 (43%), Gaps = 11/93 (11%)
Query: 654 FKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCL 713
+ DL+ KDG + L EY EE L+ GM + YY K PG GA C
Sbjct: 686 MRTPQDLTGKDGDLILAEYSEENGPLMMQVGMATKIKNYY-KRKPGKDPGAPDCK----Y 740
Query: 714 GNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYR 746
G + SPFLG + G L+ +YR
Sbjct: 741 GETVYCH---TSPFLGSLHPG---QLLQVFIYR 767
Score = 40.8 bits (94), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 9/58 (15%)
Query: 521 FSKHSLQNRDMMEGSWLDNIIWEPVDAVGKPKLI------LDLQDEQMLFEILDNKDD 572
+S + N D++ G W DNIIW DA P+L+ LD DE ++ EI D K++
Sbjct: 486 YSIFPIDNEDLVYGRWEDNIIW---DAQAMPRLLEPPVLTLDPNDENLILEIPDEKEE 540
>gi|171695906|ref|XP_001912877.1| hypothetical protein [Podospora anserina S mat+]
gi|170948195|emb|CAP60359.1| unnamed protein product [Podospora anserina S mat+]
Length = 1113
Score = 171 bits (432), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 115/366 (31%), Positives = 186/366 (50%), Gaps = 41/366 (11%)
Query: 633 HLLPRAQKLPGENKSLRP---PGAFKKKSDLSVKDGHV-FLMEYCEERPLLLSNAGMGAN 688
HL+ ++ P + K +R P AF+ +DLS+ D L+EYCEE P++LSN GMG
Sbjct: 490 HLIRFSKPQPTKRKLMRAKKIPEAFRTSADLSMNDSSTAVLLEYCEEVPIVLSNFGMGQK 549
Query: 689 LCTYYQKSSPGD--QAGALLCSGNNCLGNVLTLEPGDKSPF--LGDIKAGCSQSSLETNM 744
+ YY++S D G G NC+ L P D+SPF +G + G + +L M
Sbjct: 550 IINYYRRSKGTDSNSKGEKRELGENCV-----LMPEDRSPFAMVGQVHPGETVPTLHNQM 604
Query: 745 YRAPVFTHKVATTDFLLVRSAKGKIS----IRRIDKVAVVAQQEPLMEVMSPGSKNLQTY 800
+RAP+F H TDFL+ RS+ GK IR ID + VV Q P MEV P S+ +
Sbjct: 605 FRAPIFKHSPRKTDFLVGRSSTGKSGASWYIRNIDHLFVVGQILPSMEVPGPHSRRVTNI 664
Query: 801 SINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQ 860
+ NR+ + YR + + + +++ +E+ R+KLKE R++ ++
Sbjct: 665 AKNRLKMVSYRLLRNSDN------VTLSDITKHVAESNESQNRQKLKEFLDFRKE---QR 715
Query: 861 VWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRLKHLGI-TQLTLPASISSAMSQL 919
W++K + E ++R L PE VC ++MQ G + L++ G ++ + A +L
Sbjct: 716 NWTLKEGDEMLPESEIRSLVRPEEVCLLDAMQVGAHELENGGYEVNDSMVNDENEAGDEL 775
Query: 920 PDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYV 979
P +A+A ++ PW L+ F+ ++ + + G GDP+G+GLG SY+
Sbjct: 776 PPDALA----------NKMAPWRLTKAFIDASH----GKAMIAVHGAGDPTGKGLGVSYL 821
Query: 980 RAAPKA 985
R + K
Sbjct: 822 RTSMKG 827
>gi|378756093|gb|EHY66118.1| hypothetical protein NERG_00814 [Nematocida sp. 1 ERTm2]
Length = 851
Score = 171 bits (432), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 129/369 (34%), Positives = 182/369 (49%), Gaps = 41/369 (11%)
Query: 624 LIHLIRTKIHLL--PRAQKLPGENKSLRPPGAFKKKSDLSVKDGHVFLM-EYCEERPLLL 680
L H R +H+ + +P + +P KKK DL+++D FL+ EY EE P L+
Sbjct: 251 LRHFHRPPLHISSGTEIRFVPLLESTAKPSSILKKKKDLTLRDTADFLLLEYSEEIPPLI 310
Query: 681 SNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLTLEPGDKSPFL--GDIKAGCSQS 738
+ GM + + T+Y+K + D + A +G++ LEP D +PF+ GD++ G S
Sbjct: 311 TKTGMASIITTFYRKCNAKDSSPA-----EPEIGSLTVLEPRDPTPFMFIGDVQPGESIP 365
Query: 739 SLETNMYRAPVFTHKVATTDFLLVRS--AKGKISIRRIDKVAVVAQQEPLMEVMSPGSKN 796
+ N+Y+AP+ H + D L VR+ K IR I+ +A V Q PL E SP S+
Sbjct: 366 GIVNNLYKAPMAFH--TSEDLLAVRTHGEKSLYYIRPIEALACVGQTLPLDEAFSPHSRR 423
Query: 797 LQTYSINRMLVNVYREFSAAAKRGL-LPCIGVDELSVQFPNLSEAIIRKKLKECAFLRRD 855
+ NRM V YR F R + +DEL FP+ SE RK LKE + +
Sbjct: 424 HNVFCKNRMKVAAYRLFYEKGNRERKMYIYQLDEL---FPHFSEGSKRKWLKEYSECIKK 480
Query: 856 GNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRLKHLGITQLTLPASISSA 915
G VW +K + + SE DLR+ PE VC YESM A RLK GI ++S
Sbjct: 481 GKD-NVWVLKPSASLLSEEDLRRAVTPEKVCQYESMLAEERRLKDAGIV-------LASV 532
Query: 916 MSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLG 975
D + EL++T WN + NFV LEI+G GDP+G G G
Sbjct: 533 EEDAGD-----------DEELKLTVWNCTRNFVNAAGGK----GVLEISGAGDPTGIGEG 577
Query: 976 FSYVRAAPK 984
FS+VRA K
Sbjct: 578 FSFVRARKK 586
>gi|440291202|gb|ELP84471.1| transcription initiation factor tfiid, putative [Entamoeba invadens
IP1]
Length = 1252
Score = 170 bits (431), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 128/411 (31%), Positives = 193/411 (46%), Gaps = 52/411 (12%)
Query: 659 DLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLT 718
+LS KDG + L+EY EE P LLS GMGA + Y ++ L+ G ++
Sbjct: 503 ELSSKDGKIHLIEYIEEFPPLLSEVGMGARIRNYCRRED------ELIVPDKFSTGEMVI 556
Query: 719 LEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKG-KISIRRIDKV 777
+E G++SPF+G +K+G S++ M + P+ KV+T DFLL+R+ +G + SIR ID +
Sbjct: 557 VERGEESPFIGKVKSGKPVQSIDNKMTKTPIHESKVSTCDFLLIRNVEGDEWSIREIDHL 616
Query: 778 AVVAQQEPL--MEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFP 835
V QQ+P E+ PGSK + R+ +Y +F + + + + FP
Sbjct: 617 FVAGQQQPQKDTEIPVPGSKAETLFVKERLETAIYLQFHQST------TLRISDFVYSFP 670
Query: 836 NLSEAIIRKKLKECA-FLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAG 894
L+E +RK LK+CA F R+ W +K + + SE DL PE VCSYE+M AG
Sbjct: 671 LLTELTVRKILKKCATFNRKGNGNGGNWELKSDYKLMSEDDLFSKMTPERVCSYEAMMAG 730
Query: 895 LYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQD 954
RL+ I IS+ S D + IE E++I PW S N +A
Sbjct: 731 KMRLQDKEIELFKYSQLISAKQSF--DVELKKRVEPLIE-EVRIAPWT-SMNVLAK---- 782
Query: 955 RENIERLEITG-------VGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTG 1007
E+ G V D R L Y R PK + +S + S +
Sbjct: 783 -------EVKGTIQADFYVKDTDPRHLLEFYRRYIPKQTGTSKL----------NSEIKS 825
Query: 1008 TDADLRRLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASGV 1058
DLR+L++ R L V +E +TRW + +++K + A G+
Sbjct: 826 RFGDLRKLTISQLRSALKNCGVNDERDLSKTRWELVNLLQK----EVARGI 872
>gi|167396112|ref|XP_001741907.1| transcription initiation factor tfiid [Entamoeba dispar SAW760]
gi|165893318|gb|EDR21612.1| transcription initiation factor tfiid, putative [Entamoeba dispar
SAW760]
Length = 1133
Score = 170 bits (430), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 125/394 (31%), Positives = 190/394 (48%), Gaps = 34/394 (8%)
Query: 659 DLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLT 718
+LS KDG + L+EY EE P LLS GMGA + Y ++ D+A + G ++
Sbjct: 402 ELSSKDGKIHLIEYIEEFPPLLSQVGMGARIRNYCRRD---DEA---VVPEKYHTGEMVI 455
Query: 719 LEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGK-ISIRRIDKV 777
+E G++SPFLG +KAG SL+ M + P+ K+ TDFLL+RS G ++R ID +
Sbjct: 456 VERGEESPFLGKVKAGQPIQSLDNKMTKTPIHETKIPETDFLLIRSEDGSGWTVREIDHL 515
Query: 778 AVVAQQEPL--MEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFP 835
V QQ+P E+ PGSK T++ R+ +Y +F + P + V + FP
Sbjct: 516 FVAGQQQPQKDTEIPVPGSKTETTFNKERLETAIYLQFHSN------PTVRVTDFVDAFP 569
Query: 836 NLSEAIIRKKLKECAFLRRDGN-GKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAG 894
N +E +RK L++CA R GN W + TF +P+E DL PE VC YE+M AG
Sbjct: 570 NQTETTVRKILRKCAKFNRKGNDSGGSWELNPTFDLPTEDDLFAKVTPERVCCYEAMMAG 629
Query: 895 LYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQD 954
RL+ I IS+ PD + IE E++ PW S ++
Sbjct: 630 KMRLQDKDIEVFKYNQLISAKQGFDPD--LKKKVEPLIE-EVRRAPWTSMSVLA----KE 682
Query: 955 RENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLRR 1014
+ + + T V D R L Y R PK +S + + DLR+
Sbjct: 683 VKGTLQTDYT-VKDTDPRHLIEYYRRYIPKQVGTSKL----------NMEIKDKYGDLRK 731
Query: 1015 LSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRK 1048
L+++ R L + +E +TRW +++++K
Sbjct: 732 LTLQQLRNALKDCGMNDEKELSKTRWDLVSLLQK 765
>gi|407041467|gb|EKE40754.1| bromodomain containing protein [Entamoeba nuttalli P19]
Length = 1163
Score = 170 bits (430), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 125/394 (31%), Positives = 189/394 (47%), Gaps = 34/394 (8%)
Query: 659 DLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLT 718
+LS KDG + L+EY EE P LLS GMGA + Y ++ D+A G ++
Sbjct: 432 ELSSKDGKIHLIEYIEEFPPLLSQVGMGARIRNYCRRD---DEASV---PEKYHTGEMVI 485
Query: 719 LEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGK-ISIRRIDKV 777
+E G++SPFLG +KAG SL+ M + P+ K+ TDFLL+RS G ++R ID +
Sbjct: 486 VERGEESPFLGKVKAGQPIQSLDNKMTKTPIHETKIPETDFLLIRSEDGSGWTVREIDHL 545
Query: 778 AVVAQQEPL--MEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFP 835
V QQ+P E+ PGSK T++ R+ +Y +F + P + V + FP
Sbjct: 546 FVAGQQQPQKDTEIPVPGSKTETTFNKERLETAIYLQFHSN------PTVRVTDFVDAFP 599
Query: 836 NLSEAIIRKKLKECAFLRRDGN-GKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAG 894
N +E +RK L++CA R GN W + TF +P+E DL PE VC YE+M AG
Sbjct: 600 NQTETTVRKILRKCAKFNRKGNDSGGSWELNPTFDLPTEDDLFAKVTPERVCCYEAMMAG 659
Query: 895 LYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQD 954
RL+ I IS+ PD + IE E++ PW S ++
Sbjct: 660 KMRLQDKDIEVFKYNQLISAKQGFDPD--LKKKVEPLIE-EVRRAPWTSMSVLA----KE 712
Query: 955 RENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLRR 1014
+ + + T V D R L Y R PK +S + + DLR+
Sbjct: 713 VKGTLQTDYT-VKDTDPRHLIEYYRRYIPKQVGTSKL----------NMEIKDKYGDLRK 761
Query: 1015 LSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRK 1048
L+++ R L + +E +TRW +++++K
Sbjct: 762 LTLQQLRNALKDCGMNDEKELSKTRWDLVSLLQK 795
>gi|71004444|ref|XP_756888.1| hypothetical protein UM00741.1 [Ustilago maydis 521]
gi|46095613|gb|EAK80846.1| hypothetical protein UM00741.1 [Ustilago maydis 521]
Length = 1214
Score = 170 bits (430), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 152/510 (29%), Positives = 231/510 (45%), Gaps = 83/510 (16%)
Query: 528 NRDMMEGSWLDNIIWE---PVDAVGKPKLILDLQDEQMLFE-ILDNKDDEHPLLHAGAMI 583
N D+ G+W IIW+ P +A K L+LD+ D QM+ E L K ++ LL A A +
Sbjct: 404 NHDLFRGTWTRGIIWDAQTPFEAFDK--LVLDMNDPQMMLEEDLGPKTKQNSLLRADAPV 461
Query: 584 ITRSA------KPSDFKPAE-SVKLFY-------------LGKELEDHKSLADQNVRPNS 623
++ +A + ++ P S FY LGK + H A + P
Sbjct: 462 VSAAAQRDLARRQAELDPLNLSNDKFYEQTREHRQRVRQTLGKLVVQHAWPAIKLQLPWY 521
Query: 624 LIHLIRTKIHLLPR-AQKLP--------------------GENKSLRPPGAFKKKSDLSV 662
L + + R A + P G K+ P + DL++
Sbjct: 522 KTKLTKAEARSFHRPAMQFPTNMPLHFSKTISSKKKKEGAGARKAKDPNEMLRTTRDLTL 581
Query: 663 KD-GHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLTLEP 721
KD G L EY EE P LLS GMG+ L YY+K D+ + G L +V
Sbjct: 582 KDTGPYVLYEYSEEYPPLLSKIGMGSLLVNYYRKKDAKDEHVPKMDIGEPYLLDV----- 636
Query: 722 GDKSPFL--GDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKG---KISIRRIDK 776
D+SPF+ G+I+ G Q +L NM RAP+F HK A TDFLL+RS + +R I
Sbjct: 637 ADESPFMKFGNIERGQVQPTLYNNMIRAPLFRHKPAHTDFLLIRSTTKNEIRYYLREIRN 696
Query: 777 VAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPN 836
+ VV Q P+ + P ++ + R+ + Y+ + ++ I + L FP+
Sbjct: 697 LFVVGQTYPVQPIPGPHARLITNNIKYRLQMIAYKLIQKSQRQ----RIKIHRLMRYFPD 752
Query: 837 LSEAIIRKKLKE-CAFLRRDGNGKQ-VWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAG 894
+E +R++LKE + R+ G+ Q W +K +P E +L K+ PE++C ESMQ G
Sbjct: 753 QNELQMRQRLKEFMEYNRKAGDVNQGFWKLKPHIVVPEEAELLKMLPPENICLAESMQVG 812
Query: 895 LYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQD 954
L G T ++A DE S ++ E + PW S NF+ T
Sbjct: 813 QRHLLDCGYT--------NTAEGDDDDE-------SKMDIEQLLAPWITSKNFINAT--- 854
Query: 955 RENIERLEITGVGDPSGRGLGFSYVRAAPK 984
+ L++ G GDP+GRG FS++R + K
Sbjct: 855 -QGKAMLKLHGDGDPTGRGEAFSFIRVSMK 883
>gi|323508296|emb|CBQ68167.1| related to TAF1-TFIID subunit (TBP-associated factor), 145 kD
[Sporisorium reilianum SRZ2]
Length = 1215
Score = 169 bits (429), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 154/515 (29%), Positives = 234/515 (45%), Gaps = 93/515 (18%)
Query: 528 NRDMMEGSWLDNIIW------EPVDAVGKPKLILDLQDEQMLFE-ILDNKDDEHPLLHAG 580
N D+ G+W +IIW EP D KL+LD+ D QM+ E L K ++ LL +
Sbjct: 403 NHDLFRGAWTRSIIWDTRSPFEPFD-----KLVLDMNDPQMMLEEDLGPKTKQNSLLRSD 457
Query: 581 AMIITRSA------KPSDFKPAE-SVKLFY-------------LGKELEDH--------- 611
A +++ +A + ++ P S FY LGK + H
Sbjct: 458 APVVSAAAQRDLARRQAELDPLNLSNDKFYEQTREHRQRVRQTLGKLVVQHAWPAIKLQL 517
Query: 612 --------KSLADQNVRP------NSLIHLIRTKIHLLPRAQKLPGENKSLRPPGAFKKK 657
K+ A RP N +H RT + ++ G K+ P +
Sbjct: 518 PWYKTKLTKAEARSFHRPAMQFPTNMPLHFSRTISS--KKKKEGAGARKAKDPNEMLRTT 575
Query: 658 SDLSVKD-GHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNV 716
DL++KD G L EY EE P LLS GMG+ L YY+K D+ + G L +V
Sbjct: 576 RDLTLKDTGPYVLYEYSEEYPPLLSKIGMGSLLVNYYRKKDAKDEHVPKMDIGEPYLLDV 635
Query: 717 LTLEPGDKSPFL--GDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKG---KISI 771
D+SPF+ G+I+ G Q +L NM RAP+F HK A TDFLL+RS + +
Sbjct: 636 -----ADESPFMKFGNIERGQVQPTLYNNMIRAPLFRHKPAHTDFLLIRSTTKNEIRYYL 690
Query: 772 RRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELS 831
R I + VV Q P+ + P ++ + R+ + Y+ + ++ I + L
Sbjct: 691 REIRNLFVVGQTYPVQPIPGPHARLITNNIKYRLQMIAYKLIQKSQRQ----RIKIHRLM 746
Query: 832 VQFPNLSEAIIRKKLKE-CAFLRRDGNGKQ-VWSMKRTFHIPSEGDLRKLAYPEHVCSYE 889
FP+ +E +R++LKE + R+ G+ Q W +K +P E +L K+ PE++C E
Sbjct: 747 RYFPDQNELQMRQRLKEFMEYNRKAGDVNQGFWKLKPHIVVPEEAELLKMLPPENICLAE 806
Query: 890 SMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVA 949
SMQ G L G T ++A DE S ++ E + PW S NF+
Sbjct: 807 SMQVGQRHLLDCGYT--------NTAEGDDDDE-------SKMDIEQLLAPWITSKNFIN 851
Query: 950 CTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPK 984
T + L++ G GDP+GRG FS++R + K
Sbjct: 852 AT----QGKAMLKLHGDGDPTGRGEAFSFIRVSMK 882
>gi|154420916|ref|XP_001583472.1| Bromodomain containing protein [Trichomonas vaginalis G3]
gi|121917714|gb|EAY22486.1| Bromodomain containing protein [Trichomonas vaginalis G3]
Length = 1230
Score = 169 bits (427), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 121/405 (29%), Positives = 193/405 (47%), Gaps = 34/405 (8%)
Query: 659 DLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLT 718
DLS + G + ++E+ E P ++N GM + L T++ K+ D ++
Sbjct: 423 DLSGRRGGIIVVEHTVEYPQFITNVGMASTLVTFWHKAHANDNPRTFD-------QHIQI 475
Query: 719 LEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKI-SIRRIDKV 777
L+P SPF+G+I L NM+ PV H V +TDFLLVRS + +R ID
Sbjct: 476 LDPDHASPFIGEIPKNEPVQCLSCNMFNVPVAKHPVESTDFLLVRSLDEPVFYLRNIDAC 535
Query: 778 AVVAQQEPLMEVMSPGSKNLQTYSIN---RMLVNVYREFSAAAKRGLLPCIGVDELSVQF 834
E +VM PG+K+ Q +++N +L+N++R R + V + F
Sbjct: 536 YCAGLLEARTKVMRPGTKDAQKFNLNFIKAILINIFRGTKQYPGRHHIQVQNV--IKEFF 593
Query: 835 PNLSEAIIRKKLKECA-FLRRDGNGKQVWSMKRTFHIPSEGDLRKL-AYPEHVCSYESMQ 892
P+++E +R LK+ A F R GNG W +K ++ + + +K+ PE VCSY+SM
Sbjct: 594 PDVNEPKLRNILKDFADFYREQGNG--FWRIKEKINL--DAEFQKIDITPEDVCSYQSML 649
Query: 893 AGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTN 952
G Y LK G+ L + + +L E + A+ IE EL TPW + NFV
Sbjct: 650 VGHYHLKKSGVNILIRSKRVYQQIQKLEGE-LTKKVAARIEIELMKTPWARTENFVKAFE 708
Query: 953 QDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADL 1012
I+R E G+ + S R S + K + GT ADL
Sbjct: 709 GQAMQIQRTE-------DGQQIMRSKSRREHDNSAGAPQPAPKKP-------LAGTKADL 754
Query: 1013 RRLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG 1057
R L++ R+ L+ VP I + +RW+++A++R+L++ +A G
Sbjct: 755 RALTLRELRDKLVSLGVPTGEIERLSRWNQVALLRELANSKAQDG 799
>gi|45200767|ref|NP_986337.1| AGL330Wp [Ashbya gossypii ATCC 10895]
gi|44985465|gb|AAS54161.1| AGL330Wp [Ashbya gossypii ATCC 10895]
gi|374109582|gb|AEY98487.1| FAGL330Wp [Ashbya gossypii FDAG1]
Length = 1011
Score = 169 bits (427), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 134/475 (28%), Positives = 226/475 (47%), Gaps = 61/475 (12%)
Query: 547 AVGKPKLILDLQDEQMLFEILDNKDDEHPLLHAGAMIITRS---------AKPSDFKPAE 597
A+G+ +L D+ + + + DD++ +L RS ++P+ +
Sbjct: 345 AIGRSSTVL-YNDKHLFSKFNISNDDKYRILKENYQTKIRSTISNLSIEHSQPAARLQSP 403
Query: 598 SVKLFYLGKELED-HKSLADQNVRPNSLIHLIRTKIHLLPRAQKLPGENKSLRPPGAFKK 656
K+ ++L H+ + +RP + I + K+ R + K +R F
Sbjct: 404 FYKVLLPKEQLRHFHRCHFGKGIRPGTNIVFSKIKVRRRKRDK-----GKDVRE--IFSN 456
Query: 657 KSDLSVKDG-HVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGN 715
SDL++ D VFLMEYCE++P+ LS GM + L YY+K S D + L G +
Sbjct: 457 SSDLTIGDSVPVFLMEYCEQQPIALSKFGMASKLINYYRKRSETDTSRPKLPVGET---H 513
Query: 716 VLTLEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKG----KI 769
VL ++ DKSPF G ++ G +L NM RAPVF H+V+ TDFLL++SA +
Sbjct: 514 VLGVQ--DKSPFWNFGFVEPGAIVPTLYNNMIRAPVFKHEVSRTDFLLIKSAGNGTGTRF 571
Query: 770 SIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDE 829
+R+I+ + V Q P++E+ P S+ + + NR+ + VYR + + + LL V +
Sbjct: 572 YLRQINHLFTVGQTFPVVEIPGPNSRKVTSMGKNRLRMVVYRILNKSPEHRLL----VKQ 627
Query: 830 LSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYE 889
++ FP+ ++ R++LKE +RDG+ + W +K + +++K+ PE V E
Sbjct: 628 VARHFPDQNDMQNRQRLKEFMKYQRDGDDQGFWKLKEGEVLLDNENVKKMISPEDVSMLE 687
Query: 890 SMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIER-ELQITPWNLSSNFV 948
SM AG Q ++ S + E + PWN + NF+
Sbjct: 688 SMYAG----------------------QQFQEDTDMFNFNSKLRTLEENLIPWNATKNFL 725
Query: 949 ACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGS 1003
T Q R I+ I G GDP+G G GFS+++ + K + + ++ A G S
Sbjct: 726 NAT-QMRAMIQ---IHGAGDPTGCGEGFSFLKTSMKGGFTKSGESEQPQATGGHS 776
>gi|388855104|emb|CCF51235.1| related to TAF1-TFIID subunit (TBP-associated factor), 145 kD
[Ustilago hordei]
Length = 1213
Score = 169 bits (427), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 148/510 (29%), Positives = 231/510 (45%), Gaps = 83/510 (16%)
Query: 528 NRDMMEGSWLDNIIWE---PVDAVGKPKLILDLQDEQMLFE-ILDNKDDEHPLLHAGAMI 583
N D+ G+W +IIW+ P +A K L+LD+ D QM+ E L K ++ LL + A +
Sbjct: 401 NHDLFRGAWTRSIIWDATTPFEAFDK--LVLDMNDPQMMLEEDLSPKSKQNSLLRSDAPV 458
Query: 584 ITRSAKPSDFKPAESVKLFYLG-----KELEDHKS--------LADQNVRPNSLIHLIRT 630
++ +A+ + F L ++ +H+ L Q+ P + L
Sbjct: 459 VSAAAQRDLARRQAEQDPFNLSNDKFYEQTREHRQRVRQTLGKLVVQHAWPAIKLQLPWY 518
Query: 631 KIHLLPR--------AQKLP--------------------GENKSLRPPGAFKKKSDLSV 662
K L A + P G K+ P + DL++
Sbjct: 519 KTKLTKNEARSWHRPAMQFPTNMPLHFSKTISSKKKKEGAGARKAKDPNEMLRTTRDLTL 578
Query: 663 KD-GHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLTLEP 721
KD G L EY EE P LLS GMG+ L YY+K D+ + G + L +V
Sbjct: 579 KDTGPYVLYEYSEEYPPLLSKIGMGSLLVNYYRKKDAKDEHVPKMDIGESYLLDV----- 633
Query: 722 GDKSPFL--GDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKG---KISIRRIDK 776
D+SPF+ G+I+ G Q +L NM RAP+F HK A TDFLL+RS + +R I
Sbjct: 634 ADESPFMKFGNIERGQVQPTLYNNMIRAPLFRHKSAHTDFLLIRSTTKNEIRYYLREIRN 693
Query: 777 VAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPN 836
+ VV Q P+ + P ++ + R+ + Y+ + ++ I + L FP+
Sbjct: 694 LFVVGQTYPVQPIPGPHARLITNNIKYRLQMIAYKLIQKSQRQ----RIKIHRLMRYFPD 749
Query: 837 LSEAIIRKKLKE-CAFLRRDGNGKQ-VWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAG 894
+E +R++LKE + R+ G+ Q W +K +P E +L K+ PE++C ESMQ G
Sbjct: 750 QNELQMRQRLKEFMEYNRKAGDVNQGFWKLKPHIVVPEEAELLKMLPPENICLAESMQVG 809
Query: 895 LYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQD 954
L G T ++A DE S ++ E + PW S NF+ T
Sbjct: 810 QRHLLDCGYT--------NTAEGDDDDE-------SKMDIEQLLAPWITSKNFINAT--- 851
Query: 955 RENIERLEITGVGDPSGRGLGFSYVRAAPK 984
+ L++ G GDP+GRG FS++R + K
Sbjct: 852 -QGKAMLKLHGDGDPTGRGEAFSFIRVSMK 880
>gi|67484150|ref|XP_657295.1| bromodomain protein [Entamoeba histolytica HM-1:IMSS]
gi|56474551|gb|EAL51916.1| bromodomain protein, putative [Entamoeba histolytica HM-1:IMSS]
gi|449709529|gb|EMD48778.1| transcription initiation factor tfiid, putative [Entamoeba
histolytica KU27]
Length = 1163
Score = 168 bits (426), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 124/394 (31%), Positives = 189/394 (47%), Gaps = 34/394 (8%)
Query: 659 DLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLT 718
+LS KDG + L+EY EE P LLS GMGA + Y ++ D+A G ++
Sbjct: 432 ELSSKDGKIHLIEYIEEFPPLLSQVGMGARIRNYCRRD---DEATV---PEKYHTGEMVI 485
Query: 719 LEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGK-ISIRRIDKV 777
+E G++SPFLG +K+G SL+ M + P+ K+ TDFLL+RS G ++R ID +
Sbjct: 486 VERGEESPFLGKVKSGQPIQSLDNKMTKTPIHETKIPETDFLLIRSEDGSGWTVREIDHL 545
Query: 778 AVVAQQEPL--MEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFP 835
V QQ+P E+ PGSK T++ R+ +Y +F + P + V + FP
Sbjct: 546 FVAGQQQPQKDTEIPVPGSKTETTFNKERLETAIYLQFHSN------PTVRVTDFVDAFP 599
Query: 836 NLSEAIIRKKLKECAFLRRDGN-GKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAG 894
N +E +RK L++CA R GN W + TF +P+E DL PE VC YE+M AG
Sbjct: 600 NQTETTVRKILRKCAKFNRKGNDSGGSWELNPTFDLPTEDDLFAKVTPERVCCYEAMMAG 659
Query: 895 LYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQD 954
RL+ I IS+ PD + IE E++ PW S ++
Sbjct: 660 KMRLQDKDIEVFKYNQLISAKQGFDPD--LKKKVEPLIE-EVRRAPWTSMSVLA----KE 712
Query: 955 RENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLRR 1014
+ + + T V D R L Y R PK +S + + DLR+
Sbjct: 713 VKGTLQTDYT-VKDTDPRHLIEYYRRYIPKQVGTSKL----------NMEIKDKYGDLRK 761
Query: 1015 LSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRK 1048
L+++ R L + +E +TRW +++++K
Sbjct: 762 LTLQQLRNALKDCGMNDEKELSKTRWDLVSLLQK 795
>gi|443896651|dbj|GAC73995.1| transcription initiation factor TFIID, subunit TAF1, partial
[Pseudozyma antarctica T-34]
Length = 1138
Score = 167 bits (423), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 146/515 (28%), Positives = 232/515 (45%), Gaps = 93/515 (18%)
Query: 528 NRDMMEGSWLDNIIW------EPVDAVGKPKLILDLQDEQMLFE-ILDNKDDEHPLLHAG 580
N D++ G+W +IIW EP D L+LD+ D QM+ E + K ++ LL +
Sbjct: 413 NHDLVRGAWTRSIIWDAHTLFEPFDT-----LVLDMNDPQMMLEEDVGPKIKQNSLLRSD 467
Query: 581 AMIITRSAKPSDFKPAESVKLFYLG-----KELEDHKSLADQNV---------------- 619
A +++ +AK + + +F L ++ +H+ Q +
Sbjct: 468 APVVSAAAKRDLARRQAELDIFNLSNDKFYEQTREHRQRVRQTLGKLVVQHAWPAIKLQL 527
Query: 620 ----------------RP------NSLIHLIRTKIHLLPRAQKLPGENKSLRPPGAFKKK 657
RP N +H RT + ++ G K+ P +
Sbjct: 528 PWYKTKLTKAEARSFHRPAMQFPTNMPLHFSRTISS--KKKKEGAGARKAKDPNEMLRTT 585
Query: 658 SDLSVKD-GHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNV 716
DL++KD G L EY EE P LLS GMG+ L YY+K D+ + G L
Sbjct: 586 RDLTLKDTGPYVLYEYSEEYPPLLSKIGMGSLLVNYYRKKDAKDEHVPKMDIGEPYL--- 642
Query: 717 LTLEPGDKSPFL--GDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKG---KISI 771
L+ D+SPF+ G+I+ G Q +L NM RAP+F HK + TDFLL+RS + +
Sbjct: 643 --LDVADESPFMKFGNIERGQVQPTLYNNMIRAPLFRHKPSHTDFLLIRSTTKNEIRYYL 700
Query: 772 RRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELS 831
R I + VV Q P+ + P ++ + R+ + Y+ + ++ I + L
Sbjct: 701 REIRNLFVVGQTYPVQPIPGPHARLITNNIKYRLQMIAYKLIQKSQRQ----RIKIHRLM 756
Query: 832 VQFPNLSEAIIRKKLKE-CAFLRRDGNGKQ-VWSMKRTFHIPSEGDLRKLAYPEHVCSYE 889
FP+ +E +R++LKE + R+ G+ Q W +K +P E +L K+ PE++C E
Sbjct: 757 RYFPDQNELQMRQRLKEFMEYNRKAGDVNQGFWKLKAHIVVPEEAELLKMLPPENICLAE 816
Query: 890 SMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVA 949
SMQ G L G T ++A DE S ++ E + PW S NF+
Sbjct: 817 SMQVGQRHLLDCGYT--------NTAEGDDDDE-------SKMDIEQLLAPWITSKNFIN 861
Query: 950 CTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPK 984
T + L++ G GDP+GRG FS++R + K
Sbjct: 862 AT----QGKAMLKLHGDGDPTGRGEAFSFIRVSMK 892
>gi|254566033|ref|XP_002490127.1| TFIID subunit (145 kDa) [Komagataella pastoris GS115]
gi|238029923|emb|CAY67846.1| TFIID subunit (145 kDa) [Komagataella pastoris GS115]
gi|328350527|emb|CCA36927.1| Putative transcription initiation factor TFIID 111 kDa subunit
[Komagataella pastoris CBS 7435]
Length = 1010
Score = 167 bits (422), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 108/346 (31%), Positives = 184/346 (53%), Gaps = 35/346 (10%)
Query: 654 FKKKSDLSVKD-GHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNC 712
FKK DL++ D FL+EY EE+P+ LSN GMG+ L YY+K + D + L G
Sbjct: 431 FKKSVDLTLGDSASFFLLEYSEEQPVALSNFGMGSKLINYYRKLNDDDNSRPKLPVGET- 489
Query: 713 LGNVLTLEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKIS 770
+VL ++ D+SPF G ++ G + NM RAP+F H+ TDFLL+RS+ G IS
Sbjct: 490 --HVLGVQ--DRSPFWNFGFVEPGNLVPTFYNNMVRAPIFRHEPEETDFLLIRSSGGGIS 545
Query: 771 ----IRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIG 826
+R +D V V Q P+++V P S+ + + S NR+ + VYR + + L+
Sbjct: 546 PRYFLRSLDHVFTVGQTFPVVDVPGPHSRKVTSTSKNRLKMIVYRVLNKNERHRLV---- 601
Query: 827 VDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVC 886
V ++S+ FP+ ++ R++LKE +++G W +K +P +++++ PE +
Sbjct: 602 VKDISIHFPDQNDMQNRQRLKEFMEYQKNGEDHGFWKIKGNEILPGFKEIQQMIQPEDIA 661
Query: 887 SYESMQAGLYRLK-HLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSS 945
E+MQ G L+ + + + TL ++ +EA+ ++Q+ PW+ +
Sbjct: 662 LLEAMQFGQLNLEDYDSLREETLIGQTTATT----EEAL----------QVQMAPWSTTK 707
Query: 946 NFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAM 991
NF+ T + L++ G+GDPS +G S++R + K S+M
Sbjct: 708 NFIQAT----QGKAMLQVHGIGDPSKKGEAISFLRISMKGGFKSSM 749
>gi|395334824|gb|EJF67200.1| hypothetical protein DICSQDRAFT_142762 [Dichomitus squalens LYAD-421
SS1]
Length = 1066
Score = 166 bits (420), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 126/443 (28%), Positives = 198/443 (44%), Gaps = 78/443 (17%)
Query: 656 KKSDLSVKDGHVFLM-EYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLG 714
+ DLS++D F++ E+ EE P ++SN GMG+ L YY+K + D + LG
Sbjct: 416 RTGDLSLRDTSNFVLWEFSEEHPPIISNFGMGSILVNYYRKKNEKDD-----YIPKSDLG 470
Query: 715 NVLTLEPGDKSPFL--GDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVR-SAKG--KI 769
+ +EP D+SPF+ G + G + +L N+ RAP+F HK TDFL++R S KG K
Sbjct: 471 EPIVIEPQDESPFMKFGSVYPGQTVPALYNNLVRAPLFRHKAYPTDFLVIRTSTKGETKY 530
Query: 770 SIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDE 829
IR I + VV Q P+ EV P S+ + R+ + ++ + ++ L +
Sbjct: 531 YIREISNLFVVGQTYPITEVPGPHSRKITNTIKQRLQIIAFKLLEKSTEKRL----KISR 586
Query: 830 LSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYE 889
L FP+ +E +R++LKE R G + W +K + IPS D+ K+ PE V E
Sbjct: 587 LMKYFPDQNELQMRQRLKEFMEYHRRGQHQGFWRLKGNWTIPSYTDMLKMVTPEQVVLSE 646
Query: 890 SMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVA 949
SMQ G L+ G + + +A ++ E Q+ PW + NF+
Sbjct: 647 SMQVGQRHLQDSGYSY---------------NGEVAEEDEGNLSIEQQLAPWITTKNFLF 691
Query: 950 CTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTD 1009
T L++ G GDP+GRG FS++R S+ VK G D
Sbjct: 692 ATQAK----AMLKLHGEGDPTGRGEAFSFIR----VSMKDIFVK------------AGED 731
Query: 1010 ADLRRLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASGVQLQQQTRGKCQ 1069
+ + E+ + ++NV E+ QQ + + +
Sbjct: 732 YEQKLAEAESRPKSAHRYNVAEQ----------------------------QQIYKSEIE 763
Query: 1070 EIWDRQVQSLSAADDDEIGSDSE 1092
IW Q SLS D+ E+ D E
Sbjct: 764 RIWKAQFDSLSRKDEPELSEDEE 786
>gi|389751183|gb|EIM92256.1| hypothetical protein STEHIDRAFT_164578 [Stereum hirsutum FP-91666
SS1]
Length = 1097
Score = 166 bits (419), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 128/444 (28%), Positives = 198/444 (44%), Gaps = 78/444 (17%)
Query: 653 AFKKKSDLSVKDGHVFLM-EYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNN 711
+ SDLS+KD F++ EY EE P ++SN GMG+ L YY+K D L
Sbjct: 411 GLHRTSDLSLKDTSNFVLWEYSEEHPPIMSNFGMGSILVNYYRKKGEKDDTIPKLD---- 466
Query: 712 CLGNVLTLEPGDKSPFL--GDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRS---AK 766
LG LEP D+SPF+ G ++ G + +L N+ RAP+F HK TDFL++++ +
Sbjct: 467 -LGAPFVLEPQDESPFMKFGSVEPGQTIPTLYNNLVRAPLFRHKPYHTDFLVIKNTIKGE 525
Query: 767 GKISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIG 826
K IR + + V Q PL EV P S+ + +R+ + Y+ ++ L
Sbjct: 526 AKYYIREVKNLYTVGQTYPLTEVPGPHSRKITNTIKHRLQIIAYKLLRKSSGERL----K 581
Query: 827 VDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVC 886
+ L FP+ +E +R++LKE R G + W +K ++IP++ D+ K+ PE V
Sbjct: 582 IARLMKYFPDQNELQMRQRLKEFMEYHRRGPHQGFWRLKANWNIPNDADMLKMVGPEQVV 641
Query: 887 SYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSN 946
ESMQ G L+ G + A DE S++ E Q+ PW + N
Sbjct: 642 LSESMQVGQRHLQDSGYSGTDTAAD--------DDE-------SNLSIEQQLAPWITTKN 686
Query: 947 FVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVT 1006
F+ T L + G GDP+GRG FS++R S+ VK
Sbjct: 687 FLFATQAK----AMLRLHGEGDPTGRGEAFSFIR----VSMKDIFVK------------A 726
Query: 1007 GTDADLRRLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASGVQLQQQTRG 1066
G D D + E+ + ++NV E+ QQ +
Sbjct: 727 GEDYDQKLAEAESRPKSAHRYNVAEQ----------------------------QQIYKS 758
Query: 1067 KCQEIWDRQVQSLSAADDDEIGSD 1090
+ + IW Q +SLS D+ ++ D
Sbjct: 759 EIERIWRAQYRSLSRKDEPQLSDD 782
>gi|19074685|ref|NP_586191.1| TRANSCRIPTION INITIATION FACTOR TFIID 111kDa SUBUNIT
[Encephalitozoon cuniculi GB-M1]
gi|19069327|emb|CAD25795.1| TRANSCRIPTION INITIATION FACTOR TFIID 111kDa SUBUNIT
[Encephalitozoon cuniculi GB-M1]
Length = 883
Score = 165 bits (417), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 122/344 (35%), Positives = 167/344 (48%), Gaps = 46/344 (13%)
Query: 643 GENKSLRPPGAFKKKSDLSVKDGHVF-LMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQ 701
G NK P G KK +L+V+D F L EY EE P L N GM + L YY+KS+ D+
Sbjct: 298 GRNK---PQGIIKKAGELTVRDASPFSLFEYSEEEPFFLVNPGMVSLLNIYYRKSNARDE 354
Query: 702 AGALLCSGNNCLGNVLTLEPGDKSPFLG--DIKAGCSQSSLETNMYRAPVFTHKVATTDF 759
L+P D SPF G D+ G S +L N++ APVF H ++ D+
Sbjct: 355 YAP-------DQSQYTVLDPEDPSPFFGFGDVTPGTSIQALTNNLFIAPVFKH--SSGDY 405
Query: 760 LLVR--SAKGKISI--RRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSA 815
L + S G++S+ R ID + V QQ PL EV +P S+ L + NR+ V +R F++
Sbjct: 406 LCIVEPSNSGEMSLVYRSIDNLYCVGQQFPLEEVYAPHSRKLNVFCKNRLKVAAFRLFNS 465
Query: 816 AAKRGLLPCIGVDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGD 875
K G + + +L FP SE RK LKE A + G VW ++ + + E D
Sbjct: 466 --KEGGSKELRISQLDEMFPYFSEGSKRKWLKEYADCVKKGRD-NVWVLRPSSALLGEED 522
Query: 876 LRKLAYPEHVCSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERE 935
LRKL PE++C YESM AG +L+ G + + P
Sbjct: 523 LRKLVTPENICQYESMLAGERKLQDSGYKTVVESDDEENEEEMAP--------------- 567
Query: 936 LQITPWNLSSNFV-ACTNQDRENIERLEITGVGDPSGRGLGFSY 978
PW LS NFV AC + LE++G GDPSG G GFS+
Sbjct: 568 ---PPWCLSRNFVNACNGRG-----LLELSGPGDPSGIGEGFSF 603
>gi|449329993|gb|AGE96259.1| transcription initiation factor TFIId111kDa subunit
[Encephalitozoon cuniculi]
Length = 883
Score = 165 bits (417), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 122/344 (35%), Positives = 167/344 (48%), Gaps = 46/344 (13%)
Query: 643 GENKSLRPPGAFKKKSDLSVKDGHVF-LMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQ 701
G NK P G KK +L+V+D F L EY EE P L N GM + L YY+KS+ D+
Sbjct: 298 GRNK---PQGIIKKAGELTVRDASPFSLFEYSEEEPFFLVNPGMVSLLNIYYRKSNARDE 354
Query: 702 AGALLCSGNNCLGNVLTLEPGDKSPFLG--DIKAGCSQSSLETNMYRAPVFTHKVATTDF 759
L+P D SPF G D+ G S +L N++ APVF H ++ D+
Sbjct: 355 YAP-------DQSQYTVLDPEDPSPFFGFGDVTPGTSIQALTNNLFIAPVFKH--SSGDY 405
Query: 760 LLVR--SAKGKISI--RRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSA 815
L + S G++S+ R ID + V QQ PL EV +P S+ L + NR+ V +R F++
Sbjct: 406 LCIVEPSNSGEMSLVYRSIDNLYCVGQQFPLEEVYAPHSRKLNVFCKNRLKVAAFRLFNS 465
Query: 816 AAKRGLLPCIGVDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGD 875
K G + + +L FP SE RK LKE A + G VW ++ + + E D
Sbjct: 466 --KEGGSKELRISQLDEMFPYFSEGSKRKWLKEYADCVKKGRD-NVWVLRPSSALLGEED 522
Query: 876 LRKLAYPEHVCSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERE 935
LRKL PE++C YESM AG +L+ G + + P
Sbjct: 523 LRKLVTPENICQYESMLAGERKLQDSGYKTVVESDDEENEEEMAP--------------- 567
Query: 936 LQITPWNLSSNFV-ACTNQDRENIERLEITGVGDPSGRGLGFSY 978
PW LS NFV AC + LE++G GDPSG G GFS+
Sbjct: 568 ---PPWCLSRNFVNACNGRG-----LLELSGPGDPSGIGEGFSF 603
>gi|441623617|ref|XP_004093344.1| PREDICTED: LOW QUALITY PROTEIN: transcription initiation factor TFIID
subunit 1-like [Nomascus leucogenys]
Length = 2290
Score = 164 bits (416), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 107/301 (35%), Positives = 157/301 (52%), Gaps = 35/301 (11%)
Query: 825 IGVDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEH 884
I + ++ FP+ SE+ IRK+LK CA +R G W +K F +P+E ++R PE
Sbjct: 1234 IRMXDIKKAFPSHSESSIRKRLKLCADFKRTGMDSNWWVLKSDFRLPTEEEIRAKVSPEQ 1293
Query: 885 VCSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLS 944
C+Y SM A RLK G + + A P+E I+ E+ PWN +
Sbjct: 1294 CCAYYSMIAAEQRLKDAGYGKKSFFA---------PEEEKEEDFRMKIDDEVHTAPWNTT 1344
Query: 945 SNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGST 1004
F+A + LE+TGV DP+G G GFSYV+ P K+ A + T
Sbjct: 1345 RAFIAAM----KGKCLLEVTGVADPTGCGEGFSYVKI-PNKPTQQKDDKEPQAVKK---T 1396
Query: 1005 VTGTDADLRRLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG------- 1057
VTGTDADLRRLS++ A+++L KF VPEE I K +RW I ++R +S+EQA SG
Sbjct: 1397 VTGTDADLRRLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSKF 1456
Query: 1058 --------VQLQQQTRGKCQEIWDRQVQSLSAAD---DDEIGSDSEHSDLDSFAGDLENL 1106
+ Q+ + +CQ I+D Q + LS+ + D S +E SD++ ++EN+
Sbjct: 1457 ARGSRFSVAEHQKHYKEECQRIFDLQNKVLSSTEVLTTDTDSSSAEDSDIEEMRKNIENM 1516
Query: 1107 L 1107
L
Sbjct: 1517 L 1517
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 72/141 (51%), Gaps = 9/141 (6%)
Query: 654 FKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCL 713
+ DL+ KDG + L EY EE L+ GM + YY K PG GA C
Sbjct: 684 MRTPQDLTGKDGDLILAEYSEENAPLMMQIGMATKINNYY-KRKPGKDPGAPDCK----Y 738
Query: 714 GNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRR 773
G + SPFLG + G + E N++RAP++ HK+ TDFL++R+ +G IR
Sbjct: 739 GETVYCH---TSPFLGSLHPGQLLQAFENNLFRAPIYLHKMPETDFLIIRTRQG-YYIRE 794
Query: 774 IDKVAVVAQQEPLMEVMSPGS 794
+ + VV QQ PL EV P +
Sbjct: 795 LVDIFVVGQQCPLFEVPGPAT 815
>gi|347830762|emb|CCD46459.1| similar to transcription factor TFIID complex 145 kDa subunit
[Botryotinia fuckeliana]
Length = 1095
Score = 164 bits (414), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 113/346 (32%), Positives = 167/346 (48%), Gaps = 35/346 (10%)
Query: 654 FKKKSDLSVKDGH--VFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNN 711
FK+ DL++ D + L+EY EE+P++LSN GMG + YY++ DQ S +
Sbjct: 509 FKESKDLTLGDFYSTATLIEYSEEQPIVLSNFGMGNKIINYYRRKDAEDQDRP---SPED 565
Query: 712 CLGNVLTLEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKG-- 767
+G+ L P DKSPF G + G + +L MYRAP+F H+ TDFL VRS G
Sbjct: 566 KIGDTTILLPEDKSPFANFGFVDPGETVRALHNEMYRAPIFKHQPQNTDFLCVRSTTGVH 625
Query: 768 --KISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCI 825
+R ID + V QQ P ++V +P S+ + + NR+ + +R+ +R +
Sbjct: 626 GTTWHLRNIDNLFVAGQQFPSIKVPTPHSRTVTNATKNRVKMIAFRKI----RRSNTKSL 681
Query: 826 GVDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHV 885
+ EL+ P+ ++ R KLKE L D N K VW + IP E LR L PE
Sbjct: 682 RIAELTAHIPDTNDMQNRAKLKE--ILVYDKNEK-VWRPEEGTIIPDEAALRSLVKPEDC 738
Query: 886 CSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSS 945
C ++M G L G+++LT A P + ++TPWN S
Sbjct: 739 CMIDAMHVGCRNLADAGLSELTEKEEGDEAFVDRP-------------IDFKLTPWNTSK 785
Query: 946 NFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAM 991
F+ T+ LE+ G GDPSG GL S ++ + K A+
Sbjct: 786 AFLDATS----GKAMLELHGDGDPSGCGLAISMIQTSMKGGYIGAV 827
>gi|302698255|ref|XP_003038806.1| TAF1, transcription initiation factor TFIID, subunit TAF1
[Schizophyllum commune H4-8]
gi|300112503|gb|EFJ03904.1| TAF1, transcription initiation factor TFIID, subunit TAF1, partial
[Schizophyllum commune H4-8]
Length = 1019
Score = 164 bits (414), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 108/335 (32%), Positives = 167/335 (49%), Gaps = 35/335 (10%)
Query: 656 KKSDLSVKDGHVFLM-EYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLG 714
K +DLS++D F++ EY EE P ++ N GMG+ L YY+K D+ LG
Sbjct: 403 KTTDLSLRDTSNFVLCEYSEEHPPVVPNFGMGSTLVNYYRKKDDKDEYVPKFD-----LG 457
Query: 715 NVLTLEPGDKSPFL--GDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVR-SAKGKIS- 770
LEP D SPF+ G++ G + +L N+ RAP+F HK TDFL+VR + KG+++
Sbjct: 458 VPFVLEPQDDSPFMKFGNVYPGQAIPALYNNLVRAPLFRHKPYNTDFLVVRHTYKGQVTY 517
Query: 771 -IRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDE 829
+R I + V Q P+ EV P S+ + + NR+ + ++ + ++ L +
Sbjct: 518 YLREIKNLFVAGQTYPVTEVPGPHSRKITSTIKNRLQIIAFKLLRKSDEQRL----KIHR 573
Query: 830 LSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYE 889
L FP+ +E +R++LKE R G + W +K IPS+ ++ K+ PE V E
Sbjct: 574 LMKYFPDQNELQMRQRLKEFMEYHRRGIHQGFWRLKDHLTIPSDAEMLKMITPEQVVLME 633
Query: 890 SMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVA 949
SMQ G L G TQ + +S +S E Q+ PW + NF+
Sbjct: 634 SMQVGQRHLADCGYTQTAEDSDDTSNLSI----------------EQQLAPWITTKNFIL 677
Query: 950 CTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPK 984
T L++ G GDPSGRG F+++R + K
Sbjct: 678 ATQAK----AMLKLHGEGDPSGRGEAFNFIRISMK 708
>gi|390604630|gb|EIN14021.1| TAF1 transcription initiation factor TFIID subunit TAF1
[Punctularia strigosozonata HHB-11173 SS5]
Length = 1030
Score = 163 bits (413), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 107/338 (31%), Positives = 164/338 (48%), Gaps = 36/338 (10%)
Query: 653 AFKKKSDLSVKDGHVFLM-EYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNN 711
+K DLS++D F++ E+ EE P ++S+ GMG+ L YY+K D+
Sbjct: 421 GLRKTGDLSLQDTSNFVLWEFSEEHPPIMSSFGMGSILVNYYRKKDEKDE-----HIPKY 475
Query: 712 CLGNVLTLEPGDKSPFL--GDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRS---AK 766
LG LEP D+SPF+ G + G + +L N+ RAP+F HK TDFL++RS +
Sbjct: 476 DLGTPFVLEPQDESPFMKFGSVAPGQTVPALYNNLLRAPLFRHKPYPTDFLVIRSTHKGE 535
Query: 767 GKISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIG 826
+ IR I + VV Q P+ EV P S+ + T +R+ + ++ + L
Sbjct: 536 ARYFIREIKNLFVVGQTYPVTEVPGPHSRKITTTIKHRLQIIAFKLLKKSQGERL----K 591
Query: 827 VDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVC 886
+ L FP+ +E +R++LKE R G + W +K T+ IPS+ D+ K+ PE
Sbjct: 592 ITRLMKYFPDQNELQMRQRLKEFMEYHRRGPHQGFWRLKETWSIPSDADMLKMVGPEQAV 651
Query: 887 SYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSN 946
ESMQ G L+ LG + T S++ E Q+ PW + N
Sbjct: 652 LNESMQVGQRHLQDLGYSNET-----------------GEGDESNLTVEQQLAPWITTKN 694
Query: 947 FVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPK 984
F+ T L + G GDP+GRG FS++R + K
Sbjct: 695 FLLATQAK----AMLRLHGDGDPTGRGEAFSFLRVSMK 728
>gi|344228527|gb|EGV60413.1| hypothetical protein CANTEDRAFT_95868 [Candida tenuis ATCC 10573]
Length = 1097
Score = 163 bits (413), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 123/399 (30%), Positives = 193/399 (48%), Gaps = 49/399 (12%)
Query: 619 VRPNSLIHLIRTKIHLLPRAQKLPGENKSLRPPGAFKKKSDLSVKDGHVFL-MEYCEERP 677
VRP +LI +K+ R + +K L F K +DL+ D + MEY EE P
Sbjct: 469 VRPGTLISF--SKVKARKRKKDKGKTSKEL-----FAKSTDLTAGDNTTIISMEYTEEYP 521
Query: 678 LLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLTLEPGDKSPF--LGDIKAGC 735
++LSN GMG+ L YY++ P D + LG L D+SPF G ++ G
Sbjct: 522 MILSNYGMGSKLINYYRREKPDDNSRP-----KAPLGETHVLGVEDRSPFWNFGYVEKGD 576
Query: 736 SQSSLETNMYRAPVFTHKVATTDFLLVRSAKG----KISIRRIDKVAVVAQQEPLMEVMS 791
+L NM RAP+F H+ +TDF+LVRS G K ++ +D + V P +EV +
Sbjct: 577 FVPTLYNNMIRAPIFKHETKSTDFVLVRSQGGGNHQKYYLKSLDHIFSVGHTFPSVEVPA 636
Query: 792 PGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLSEAIIRKKLKECAF 851
P S+ + S NR+ + V+R + + I V ++S FP+ ++ R++LKE
Sbjct: 637 PHSRKVTNTSKNRLKMIVFRTMNKKGR----ARINVKDISHHFPDQNDMQNRQRLKEFME 692
Query: 852 LRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRLKHLGI--TQLTLP 909
+R G + W +K P E +R + PE V +SMQAG L L I +
Sbjct: 693 YQRHGEDQYYWKIKNRDTAPEEESIRMMISPEDVALLDSMQAGQQLLDDLSIFLNEEQEK 752
Query: 910 ASISS-AMSQL------PDEAIALAAASHIEREL-------------QITPWNLSSNFVA 949
A ++ + QL D++ ++E Q+T WNL+ NFV+
Sbjct: 753 AKVNKEKIQQLEADKENEDDSTTKGKEKDKKKERKEKKEDAEEGIDEQLTSWNLTKNFVS 812
Query: 950 CTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVS 988
NQ + L++ G GDP+G G+G+S+++ + K+S S
Sbjct: 813 A-NQAK---SMLQLNGEGDPTGIGIGYSFLKTSQKSSFS 847
>gi|154321017|ref|XP_001559824.1| hypothetical protein BC1G_01383 [Botryotinia fuckeliana B05.10]
Length = 1151
Score = 163 bits (413), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 113/346 (32%), Positives = 167/346 (48%), Gaps = 35/346 (10%)
Query: 654 FKKKSDLSVKDGH--VFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNN 711
FK+ DL++ D + L+EY EE+P++LSN GMG + YY++ DQ S +
Sbjct: 582 FKESKDLTLGDFYSTATLIEYSEEQPIVLSNFGMGNKIINYYRRKDAEDQDRP---SPED 638
Query: 712 CLGNVLTLEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKG-- 767
+G+ L P DKSPF G + G + +L MYRAP+F H+ TDFL VRS G
Sbjct: 639 KIGDTTILLPEDKSPFANFGFVDPGETVRALHNEMYRAPIFKHQPQNTDFLCVRSTTGVH 698
Query: 768 --KISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCI 825
+R ID + V QQ P ++V +P S+ + + NR+ + +R+ +R +
Sbjct: 699 GTTWHLRNIDNLFVAGQQFPSIKVPTPHSRTVTNATKNRVKMIAFRKI----RRSNTKSL 754
Query: 826 GVDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHV 885
+ EL+ P+ ++ R KLKE L D N K VW + IP E LR L PE
Sbjct: 755 RIAELTAHIPDTNDMQNRAKLKE--ILVYDKNEK-VWRPEEGTIIPDEAALRSLVKPEDC 811
Query: 886 CSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSS 945
C ++M G L G+++LT A P + ++TPWN S
Sbjct: 812 CMIDAMHVGCRNLADAGLSELTEKEEGDEAFVDRP-------------IDFKLTPWNTSK 858
Query: 946 NFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAM 991
F+ T+ LE+ G GDPSG GL S ++ + K A+
Sbjct: 859 AFLDATS----GKAMLELHGDGDPSGCGLAISMIQTSMKGGYIGAV 900
>gi|302509422|ref|XP_003016671.1| hypothetical protein ARB_04963 [Arthroderma benhamiae CBS 112371]
gi|291180241|gb|EFE36026.1| hypothetical protein ARB_04963 [Arthroderma benhamiae CBS 112371]
Length = 1105
Score = 163 bits (412), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 109/339 (32%), Positives = 168/339 (49%), Gaps = 36/339 (10%)
Query: 654 FKKKSDLSVKDG-HVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNC 712
F LS+ D + L+E+ EE P +LSN GMG+ L YY+K + D +
Sbjct: 547 FDTTKSLSLADNSNALLIEHSEEYPTMLSNFGMGSRLINYYRKKNAEDPSRP-----KTE 601
Query: 713 LGNVLTLEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKG--- 767
+G L P DKSPF G + G + ++ T +YRAPVF +V +TDFL+VR++ G
Sbjct: 602 IGETAVLLPQDKSPFSSFGHVDPGETTPTITTGLYRAPVFRQEVKSTDFLIVRNSTGVEG 661
Query: 768 -KISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIG 826
IR ID + V QQ P ++V P S+ + T + NR+ + YR KR +
Sbjct: 662 SSYFIRNIDHLYVAGQQFPSIDVPGPHSRKVTTAAKNRLKMICYRRI----KRNGNNRVS 717
Query: 827 VDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVC 886
V E++ FP+ ++ R+K+KE FL+ + + K+ W MK +PSE +R PE VC
Sbjct: 718 VAEVTEHFPDSTDMQNRQKMKE--FLQFNKDHKE-WEMKSGESVPSEDVMRGYVKPEDVC 774
Query: 887 SYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSN 946
E+MQ G +L G + + D E Q+ PW + +
Sbjct: 775 LLEAMQVGQQQLHDAGYDRES-------------DNGDDYEGKEGESLEQQLAPWKTTRS 821
Query: 947 FVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKA 985
F+ + + L++ G GDP+GRG GFS+++ + K
Sbjct: 822 FLLAS----QGKAMLQLHGEGDPTGRGEGFSFIKTSMKG 856
>gi|326469526|gb|EGD93535.1| transcription factor TFIID complex 145 kDa subunit [Trichophyton
tonsurans CBS 112818]
Length = 1104
Score = 163 bits (412), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 109/339 (32%), Positives = 168/339 (49%), Gaps = 36/339 (10%)
Query: 654 FKKKSDLSVKDG-HVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNC 712
F LS+ D + L+E+ EE P +LSN GMG+ L YY+K + D +
Sbjct: 546 FDTTKSLSLADNSNALLIEHSEEYPTMLSNFGMGSRLINYYRKKNAEDPSRP-----KTE 600
Query: 713 LGNVLTLEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKG--- 767
+G L P DKSPF G + G + ++ T +YRAPVF +V +TDFL+VR++ G
Sbjct: 601 IGETAVLLPQDKSPFSSFGHVDPGETTPTITTGLYRAPVFRQEVKSTDFLIVRNSTGVEG 660
Query: 768 -KISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIG 826
IR ID + V QQ P ++V P S+ + T + NR+ + YR KR +
Sbjct: 661 SSYFIRNIDHLYVAGQQFPSIDVPGPHSRKVTTAAKNRLKMICYRRI----KRNGNNRVS 716
Query: 827 VDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVC 886
V E++ FP+ ++ R+K+KE FL+ + + K+ W MK +PSE +R PE VC
Sbjct: 717 VAEVTEHFPDSTDMQNRQKMKE--FLQFNKDHKE-WEMKSGESVPSEDIMRGYVKPEDVC 773
Query: 887 SYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSN 946
E+MQ G +L G + + D E Q+ PW + +
Sbjct: 774 LLEAMQVGQQQLHDAGYDRES-------------DNGDDYEGKEGESLEQQLAPWKTTRS 820
Query: 947 FVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKA 985
F+ + + L++ G GDP+GRG GFS+++ + K
Sbjct: 821 FLLAS----QGKAMLQLHGEGDPTGRGEGFSFIKTSMKG 855
>gi|326478947|gb|EGE02957.1| transcription factor TFIID complex 145 kDa subunit [Trichophyton
equinum CBS 127.97]
Length = 1104
Score = 163 bits (412), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 109/339 (32%), Positives = 168/339 (49%), Gaps = 36/339 (10%)
Query: 654 FKKKSDLSVKDG-HVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNC 712
F LS+ D + L+E+ EE P +LSN GMG+ L YY+K + D +
Sbjct: 546 FDTTKSLSLADNSNALLIEHSEEYPTMLSNFGMGSRLINYYRKKNAEDPSRP-----KTE 600
Query: 713 LGNVLTLEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKG--- 767
+G L P DKSPF G + G + ++ T +YRAPVF +V +TDFL+VR++ G
Sbjct: 601 IGETAVLLPQDKSPFSSFGHVDPGETTPTITTGLYRAPVFRQEVKSTDFLIVRNSTGVEG 660
Query: 768 -KISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIG 826
IR ID + V QQ P ++V P S+ + T + NR+ + YR KR +
Sbjct: 661 SSYFIRNIDHLYVAGQQFPSIDVPGPHSRKVTTAAKNRLKMICYRRI----KRNGNNRVS 716
Query: 827 VDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVC 886
V E++ FP+ ++ R+K+KE FL+ + + K+ W MK +PSE +R PE VC
Sbjct: 717 VAEVTEHFPDSTDMQNRQKMKE--FLQFNKDHKE-WEMKSGESVPSEDIMRGYVKPEDVC 773
Query: 887 SYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSN 946
E+MQ G +L G + + D E Q+ PW + +
Sbjct: 774 LLEAMQVGQQQLHDAGYDRES-------------DNGDDYEGKEGESLEQQLAPWKTTRS 820
Query: 947 FVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKA 985
F+ + + L++ G GDP+GRG GFS+++ + K
Sbjct: 821 FLLAS----QGKAMLQLHGEGDPTGRGEGFSFIKTSMKG 855
>gi|340923986|gb|EGS18889.1| transcription initiation factor tfiid-like protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 1114
Score = 163 bits (412), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 111/368 (30%), Positives = 177/368 (48%), Gaps = 41/368 (11%)
Query: 651 PGAFKKKSDLSVKDGHV-FLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSG 709
P F+ +DLS+ D L EYCEE P++LSN GMG + YY++S D
Sbjct: 523 PEIFQTSADLSMNDNSTAILFEYCEEIPIVLSNHGMGQKIINYYRRSKGTDSRPE----- 577
Query: 710 NNCLGNVLTLEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKG 767
LG L P D+SPF +G ++ G + +L M+RAP+F H TDF+L RS G
Sbjct: 578 KRELGEPYILMPEDRSPFAMVGQVQPGETVPTLHNQMFRAPIFKHTPRNTDFILGRSTTG 637
Query: 768 KIS----IRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLP 823
K IR ID + VV Q P MEV P S+ + + NR+ + YR +
Sbjct: 638 KNGSTWYIRNIDHLFVVGQTLPSMEVPGPHSRRVTNIAKNRLKMVSYRLLRRSDN----- 692
Query: 824 CIGVDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPE 883
+ + +++ + +E+ R+KLKE ++D K+ W + + E ++R L PE
Sbjct: 693 -VTLSDITKHVADSNESQNRQKLKEFLVFQKD---KRNWVLPEGEELMPESEIRSLVRPE 748
Query: 884 HVCSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNL 943
VC ++MQ G + L++ G A + D+ A A A+ ++ PW L
Sbjct: 749 DVCLLDAMQVGAHELENGGYEINDAMFKDDEAFDNIGDDLPADALAN------KMAPWRL 802
Query: 944 SSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKA----------SVSSAMVK 993
+ F+ ++ + + G GDP+G+GLG SY+R + K + S+ ++
Sbjct: 803 TKAFIDASH----GKAMIAVHGPGDPTGKGLGVSYIRTSMKGGFLEQLHGPLATSADAIE 858
Query: 994 KKAAANRG 1001
++ AN G
Sbjct: 859 RQRKANGG 866
>gi|62088212|dbj|BAD92553.1| TBP-associated factor 1 isoform 2 variant [Homo sapiens]
Length = 1070
Score = 163 bits (412), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 103/288 (35%), Positives = 150/288 (52%), Gaps = 35/288 (12%)
Query: 838 SEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYR 897
SE+ IRK+LK CA +R G W +K F +P+E ++R + PE C+Y SM A R
Sbjct: 2 SESSIRKRLKLCADFKRTGMDSNWWVLKSDFRLPTEEEIRAMVSPEQCCAYYSMIAAEQR 61
Query: 898 LKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDREN 957
LK G + + A P+E I+ E++ PWN + F+A +
Sbjct: 62 LKDAGYGEKSFFA---------PEEENEEDFQMKIDDEVRTAPWNTTRAFIAAM----KG 108
Query: 958 IERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLRRLSM 1017
LE+TGV DP+G G GFSYV+ K + K TVTGTDADLRRLS+
Sbjct: 109 KCLLEVTGVADPTGCGEGFSYVKIPNKPT----QQKDDKEPQPVKKTVTGTDADLRRLSL 164
Query: 1018 EAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------VQLQQ 1062
+ A+++L KF VPEE I K +RW I ++R +S+EQA SG + Q+
Sbjct: 165 KNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSKFARGSRFSVAEHQE 224
Query: 1063 QTRGKCQEIWDRQVQSLSAAD---DDEIGSDSEHSDLDSFAGDLENLL 1107
+ + +CQ I+D Q + LS+ + D S +E SD + ++EN+L
Sbjct: 225 RYKEECQRIFDLQNKVLSSTEVLSTDTDSSSAEDSDFEEMGKNIENML 272
>gi|392597592|gb|EIW86914.1| TAF1 transcription initiation factor TFIID subunit TAF1 [Coniophora
puteana RWD-64-598 SS2]
Length = 1050
Score = 163 bits (412), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 128/446 (28%), Positives = 197/446 (44%), Gaps = 74/446 (16%)
Query: 653 AFKKKSDLSVKDGHVFLM-EYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNN 711
+K +DL++KD F++ EY EE P ++ N GMG+ L YY+K D+ L
Sbjct: 412 GLRKTNDLTLKDTSNFVLWEYSEEHPPIIQNFGMGSILVNYYRKKDEKDEHIPKLD---- 467
Query: 712 CLGNVLTLEPGDKSPFL--GDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRS---AK 766
LG LEP D+SPF+ G + G + ++ N+ RAP+F HK TDFL VRS +
Sbjct: 468 -LGVPFVLEPQDESPFMKFGYVYPGQTFPAVYNNLIRAPLFRHKPYQTDFLCVRSTIRGE 526
Query: 767 GKISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIG 826
+ +R I + VV Q P+ EV P S+ + +R+ + ++ + + L
Sbjct: 527 TRYHLREIKNLFVVGQSYPVTEVPGPHSRKITNTIKHRLQIIAFKLLKKSYEERL----K 582
Query: 827 VDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVC 886
+ L FP+ +E +R++LKE R G + W +K IPS+ D+ K+ PE V
Sbjct: 583 ISRLMKYFPDQNELQMRQRLKEFMEYHRRGIHQGFWRLKSGITIPSDADMLKMVGPEQVV 642
Query: 887 SYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSN 946
ESMQ G L+ G TQ ++ + DE S + E Q+ PW + N
Sbjct: 643 LMESMQVGQRHLQDAGYTQ-------TAEQEKDADE----EGESKLSVEQQLAPWITTKN 691
Query: 947 FVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVT 1006
F+ T L + G GDP+GRG FS++R S+ VK
Sbjct: 692 FLFATQAK----AMLRLHGEGDPTGRGEAFSFIR----ISMKDIFVK------------A 731
Query: 1007 GTDADLRRLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASGVQLQQQTRG 1066
G D + + E + ++NV E+ QQ +
Sbjct: 732 GEDYEQKLAEAENRPKSAHRYNVAEQ----------------------------QQIYKS 763
Query: 1067 KCQEIWDRQVQSLSAADDDEIGSDSE 1092
+ + IW Q SLS D+ E+ + E
Sbjct: 764 EIERIWKAQFDSLSRTDEPELSEEDE 789
>gi|327303282|ref|XP_003236333.1| transcription factor TFIID complex subunit [Trichophyton rubrum CBS
118892]
gi|326461675|gb|EGD87128.1| transcription factor TFIID complex 145 kDa subunit [Trichophyton
rubrum CBS 118892]
Length = 1126
Score = 162 bits (410), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 109/339 (32%), Positives = 168/339 (49%), Gaps = 36/339 (10%)
Query: 654 FKKKSDLSVKDG-HVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNC 712
F LS+ D + L+E+ EE P +LSN GMG+ L YY+K + D +
Sbjct: 547 FDTTKSLSLADNSNALLIEHSEEYPTMLSNFGMGSRLINYYRKKNAEDPSRP-----KTE 601
Query: 713 LGNVLTLEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKG--- 767
+G L P DKSPF G + G + ++ T +YRAPVF +V +TDFL+VR++ G
Sbjct: 602 IGETAVLLPQDKSPFSSFGHVDPGETTPTITTGLYRAPVFRQEVKSTDFLIVRNSTGVEG 661
Query: 768 -KISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIG 826
IR ID + V QQ P ++V P S+ + T + NR+ + YR KR +
Sbjct: 662 SSYFIRNIDHLYVAGQQFPSIDVPGPHSRKVTTAAKNRLKMICYRRI----KRNGNNRVS 717
Query: 827 VDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVC 886
V E++ FP+ ++ R+K+KE FL+ + + K+ W MK +PSE +R PE VC
Sbjct: 718 VAEVTEHFPDSTDMQNRQKMKE--FLQFNKDHKE-WEMKSGETVPSEDVMRGYVKPEDVC 774
Query: 887 SYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSN 946
E+MQ G +L G + + D E Q+ PW + +
Sbjct: 775 LLEAMQVGQQQLHDAGYDRES-------------DNGDDYEGKEGESLEQQLAPWKTTRS 821
Query: 947 FVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKA 985
F+ + + L++ G GDP+GRG GFS+++ + K
Sbjct: 822 FLLAS----QGKAMLQLHGEGDPTGRGEGFSFIKTSMKG 856
>gi|156054560|ref|XP_001593206.1| hypothetical protein SS1G_06128 [Sclerotinia sclerotiorum 1980]
gi|154703908|gb|EDO03647.1| hypothetical protein SS1G_06128 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 1089
Score = 162 bits (410), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 114/348 (32%), Positives = 168/348 (48%), Gaps = 38/348 (10%)
Query: 654 FKKKSDLSVKDGH--VFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNN 711
FK+ DL++ D + L+EY EE+P++LSN GMG + YY++ DQ + +
Sbjct: 505 FKESKDLTLGDFYSAATLIEYSEEQPIVLSNFGMGNRIINYYRRKDAEDQERP---TPED 561
Query: 712 CLGNVLTLEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKG-- 767
+G+ L P DKSPF G + G + +L MYR P+F H+ TDFL VRS G
Sbjct: 562 KIGDTTILLPEDKSPFANFGFVDPGETVRALHNEMYRTPIFKHQPKNTDFLCVRSTTGVH 621
Query: 768 --KISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCI 825
+R ID + V QQ P ++V +P S+ + + NR+ + +R+ +A + L
Sbjct: 622 GTTWHLRNIDNLFVAGQQFPSIKVPTPHSRTVTNATKNRVKMIAFRKIRRSASKSLR--- 678
Query: 826 GVDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHV 885
+ EL+ P+ ++ R KLKE L D N K VW + IP E LR L PE
Sbjct: 679 -IAELTAHIPDTNDMQNRAKLKE--ILVYDKNEK-VWRPEEGTTIPDEAALRSLVKPEDC 734
Query: 886 CSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIEREL--QITPWNL 943
C ++M GL L G L+ E + I+R L ++TPWN
Sbjct: 735 CMIDAMHVGLRNLADAGYDTLS--------------EKEEGDEGTFIDRPLDFKLTPWNT 780
Query: 944 SSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAM 991
S F+ T+ LE+ G GDPSG GL S ++ + K A+
Sbjct: 781 SKAFLDATS----GKAMLELHGDGDPSGCGLAISMIQTSMKGGYIGAV 824
>gi|150865960|ref|XP_001385388.2| hypothetical protein PICST_90675 [Scheffersomyces stipitis CBS
6054]
gi|149387216|gb|ABN67359.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 1114
Score = 162 bits (410), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 105/339 (30%), Positives = 171/339 (50%), Gaps = 41/339 (12%)
Query: 653 AFKKKSDLSVKD-GHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNN 711
F K SDLS D + MEY EE PL+LSN GMG+ + YY+K D + G
Sbjct: 510 VFSKTSDLSTTDTAPLVAMEYSEEYPLILSNFGMGSKMINYYRKEREDDSSRPKAQIGET 569
Query: 712 CLGNVLTLEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRS----A 765
+VL +E D+SPF G++ G +L NM RAP+F H+V TDFL ++S +
Sbjct: 570 ---HVLGVE--DRSPFWNFGEVAPGDFVPTLYNNMVRAPIFKHEVKNTDFLFIKSQGAGS 624
Query: 766 KGKISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCI 825
+ +R I+ + V P +E+ +P S+ + S NR+ + V+R ++ + +
Sbjct: 625 HQRYFLRAINFMFSVGNVFPAVEIPAPHSRKVTNTSKNRLKMVVFRVMNSMG----VARV 680
Query: 826 GVDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHV 885
V ++S FP+ ++ R++LKE +R G+ + W ++ + +P+E ++R + PE +
Sbjct: 681 SVKDVSRHFPDQNDMQNRQRLKEFMEYQRQGDDQGFWKIRNSDSVPNENEIRSMITPEDI 740
Query: 886 CSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSS 945
+SMQ G L D I + ++ + ++ PWNLS
Sbjct: 741 SLLDSMQYG---------------------QQTLDDTYIPRDPDAEVDMDEELAPWNLSR 779
Query: 946 NFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPK 984
NFV NQ + L++ G GDP+G GLG+S +R+ K
Sbjct: 780 NFVNA-NQTK---SMLQLNGEGDPTGIGLGYSLLRSTQK 814
>gi|367052947|ref|XP_003656852.1| TAF1-like protein [Thielavia terrestris NRRL 8126]
gi|347004117|gb|AEO70516.1| TAF1-like protein [Thielavia terrestris NRRL 8126]
Length = 1158
Score = 162 bits (409), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 114/396 (28%), Positives = 188/396 (47%), Gaps = 51/396 (12%)
Query: 625 IHLIRTKIHLLPRAQKLPGENKSLRPPGAFKKKSDLSVKDGHV-FLMEYCEERPLLLSNA 683
H ++ K L R +++ G+ R P F+ SDL++ D L EYCEE P++LSN
Sbjct: 494 FHPVKFKPPSLKRKRQVKGK----RIPEIFQTSSDLTLNDNSTAILFEYCEEIPIVLSNF 549
Query: 684 GMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLTLEPGDKSPF--LGDIKAGCSQSSLE 741
GMG + YY++S D LG L P D+SPF +G + G + +L
Sbjct: 550 GMGQKIVNYYRRSKGTDSRPE-----KRELGEPYILMPEDRSPFAMVGQVHPGETVPTLH 604
Query: 742 TNMYRAPVFTHKVATTDFLLVRSAKGKIS----IRRIDKVAVVAQQEPLMEVMSPGSKNL 797
M+RAP+F H TDF+L RS GK +R ID + VV Q P MEV P S+ +
Sbjct: 605 NQMFRAPIFKHNPRNTDFILGRSTTGKSGSSWYLRNIDHLFVVGQTLPSMEVPGPHSRRV 664
Query: 798 QTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLSEAIIRKKLKECAFLRRDGN 857
+ NR+ + YR + + + +++ + +E+ R+KLKE R++
Sbjct: 665 TNIAKNRLKMVSYRLLHRSDN------VTLTDITRHVADSNESQNRQKLKEFLVFRKE-- 716
Query: 858 GKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRLKHLG--ITQLTLPASISSA 915
++ W + + E ++R L PE VC ++MQ G + L++ G +
Sbjct: 717 -QRNWVLPDNEELMPESEIRSLVRPEDVCLLDAMQVGAHELENGGYEVNDAMFKDDEMEV 775
Query: 916 MSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLG 975
+LP +A+A ++ PW L+ F+ ++ + + G GDP+G+GLG
Sbjct: 776 GDELPPDALA----------NKMAPWRLTKAFIDASH----GKAMIAVHGPGDPTGKGLG 821
Query: 976 FSYVRAAPKA----------SVSSAMVKKKAAANRG 1001
SY+R + K + S+ ++++ AN G
Sbjct: 822 VSYLRTSMKGGFLEQLHGPLATSADAIERQRKANGG 857
>gi|302655756|ref|XP_003019662.1| hypothetical protein TRV_06291 [Trichophyton verrucosum HKI 0517]
gi|291183399|gb|EFE39017.1| hypothetical protein TRV_06291 [Trichophyton verrucosum HKI 0517]
Length = 1216
Score = 161 bits (408), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 109/339 (32%), Positives = 168/339 (49%), Gaps = 36/339 (10%)
Query: 654 FKKKSDLSVKDG-HVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNC 712
F LS+ D + L+E+ EE P +LSN GMG+ L YY+K + D +
Sbjct: 547 FDTTKSLSLADNSNALLIEHSEEYPTMLSNFGMGSRLINYYRKKNAEDPSRP-----KTE 601
Query: 713 LGNVLTLEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKG--- 767
+G L P DKSPF G + G + ++ T +YRAPVF +V +TDFL+VR++ G
Sbjct: 602 IGETAVLLPQDKSPFSSFGHVDPGETTPTITTGLYRAPVFRQEVKSTDFLIVRNSTGVEG 661
Query: 768 -KISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIG 826
IR ID + V QQ P ++V P S+ + T + NR+ + YR KR +
Sbjct: 662 SSYFIRNIDHLYVAGQQFPSIDVPGPHSRKVTTAAKNRLKMICYRRI----KRNGNNRVS 717
Query: 827 VDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVC 886
V E++ FP+ ++ R+K+KE FL+ + + K+ W MK +PSE +R PE VC
Sbjct: 718 VAEVTEHFPDSTDMQNRQKMKE--FLQFNKDHKE-WEMKSGESVPSEDVMRGYVKPEDVC 774
Query: 887 SYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSN 946
E+MQ G +L G + + D E Q+ PW + +
Sbjct: 775 LLEAMQVGQQQLHDAGYDRES-------------DNGDDYEGKEGESLEQQLAPWKTTRS 821
Query: 947 FVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKA 985
F+ + + L++ G GDP+GRG GFS+++ + K
Sbjct: 822 FLLAS----QGKAMLQLHGEGDPTGRGEGFSFIKTSMKG 856
>gi|19114006|ref|NP_593094.1| transcription factor TFIID complex subunit Taf111
[Schizosaccharomyces pombe 972h-]
gi|1174555|sp|Q09813.1|T111_SCHPO RecName: Full=Putative transcription initiation factor TFIID 111
kDa subunit; AltName: Full=TAFII-111; AltName:
Full=TBP-associated factor 111 kDa
gi|1019412|emb|CAA91179.1| transcription factor TFIID complex subunit Taf111
[Schizosaccharomyces pombe]
Length = 979
Score = 161 bits (408), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 101/330 (30%), Positives = 164/330 (49%), Gaps = 32/330 (9%)
Query: 666 HVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLTLEPGDKS 725
H L+E+ EE P +LSNAGM + + YY+K + D++ L G + + L+ D+S
Sbjct: 463 HAILVEFSEEHPAVLSNAGMASRIVNYYRKKNEQDESRPKLEVGESHV-----LDVQDRS 517
Query: 726 PF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKG---KISIRRIDKVAVV 780
PF G ++ G +L M RAP+F H+V TDF+L+R++ K ++ I+ + V
Sbjct: 518 PFWNFGSVEPGEITPTLYNKMIRAPLFKHEVPPTDFILIRNSSSYGSKYYLKNINHMFVS 577
Query: 781 AQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLSEA 840
Q P+ +V P S+ + T S NR+ + V+R + GL + +LS F + +E
Sbjct: 578 GQTFPVTDVPGPHSRKVTTASKNRLKMLVFRLIRRSPNGGLF----IRQLSKHFSDQNEM 633
Query: 841 IIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRLKH 900
IR++LKE ++ G+G W +K +P E R + PE VC ESMQ G+ +L+
Sbjct: 634 QIRQRLKEFMEYKKKGDGPGYWKLKSNEVVPDEAGTRSMVSPETVCLLESMQVGVRQLED 693
Query: 901 LGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENIER 960
G + T+ + P E + + PW + NF+ T +
Sbjct: 694 AGYGK-TMDEINDDEDEEQPAEQL-------------LAPWITTRNFINAT----QGKAM 735
Query: 961 LEITGVGDPSGRGLGFSYVRAAPKASVSSA 990
L + G GDP+G G G+S++R + K A
Sbjct: 736 LTLFGEGDPTGIGEGYSFIRTSMKGGFKPA 765
>gi|315050430|ref|XP_003174589.1| transcription initiation factor TFIID subunit 1 [Arthroderma
gypseum CBS 118893]
gi|311339904|gb|EFQ99106.1| transcription initiation factor TFIID subunit 1 [Arthroderma
gypseum CBS 118893]
Length = 1126
Score = 161 bits (408), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 109/339 (32%), Positives = 167/339 (49%), Gaps = 36/339 (10%)
Query: 654 FKKKSDLSVKDG-HVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNC 712
F LS+ D + L+E+ EE P +LSN GMG+ L YY+K + D +
Sbjct: 547 FDTTKSLSLADNSNALLIEHSEEYPTMLSNFGMGSRLINYYRKKNAEDPSRP-----KTE 601
Query: 713 LGNVLTLEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKG--- 767
+G L P DKSPF G + G + ++ T +YRAPVF V +TDFL+VR++ G
Sbjct: 602 IGETAVLLPQDKSPFSSFGHVDPGETTPTITTGLYRAPVFRQDVKSTDFLIVRNSTGVEG 661
Query: 768 -KISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIG 826
IR ID + V QQ P ++V P S+ + T + NR+ + YR KR +
Sbjct: 662 SSYFIRNIDHLYVSGQQFPSIDVPGPHSRKVTTAAKNRLKMICYRRI----KRNGNNRVS 717
Query: 827 VDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVC 886
V E++ FP+ ++ R+K+KE FL+ + + K+ W MK +PSE +R PE VC
Sbjct: 718 VAEVTEHFPDSTDMQNRQKMKE--FLQFNKDHKE-WEMKSGESVPSEDVMRGYVKPEDVC 774
Query: 887 SYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSN 946
E+MQ G +L G + + D E Q+ PW + +
Sbjct: 775 LLEAMQVGQQQLHDAGYDRES-------------DNGDDYEGKEGESLEQQLAPWKTTRS 821
Query: 947 FVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKA 985
F+ + + L++ G GDP+GRG GFS+++ + K
Sbjct: 822 FLLAS----QGKAMLQLHGEGDPTGRGEGFSFIKTSMKG 856
>gi|225563206|gb|EEH11485.1| transcription factor TFIID complex subunit Taf111 [Ajellomyces
capsulatus G186AR]
Length = 1115
Score = 161 bits (407), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 110/333 (33%), Positives = 163/333 (48%), Gaps = 37/333 (11%)
Query: 660 LSVKDG-HVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLT 718
LS+ D +V L+EY EE P ++SN GMG+ L YY++ + D A +G
Sbjct: 570 LSLSDNSNVLLLEYSEEHPTMMSNFGMGSRLINYYRRKNMEDPARP-----KAEIGETAV 624
Query: 719 LEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKG----KISIR 772
L P DKSPF G I G + +++ T M+RAPVF + TDFL++R++ G IR
Sbjct: 625 LLPQDKSPFSIFGHIDPGETSAAITTAMFRAPVFQQEPKPTDFLVIRNSTGIDGSSYYIR 684
Query: 773 RIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSV 832
I+ + VV QQ P ++V P S+ + T S NR+ + YR KR + V +++
Sbjct: 685 NIENLYVVGQQFPSVDVPGPHSRKVTTASKNRLKMICYRLL----KRNKKHRVSVADITE 740
Query: 833 QFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQ 892
FP S+ R+K+KE FL+ + K+ W MK IP E LR PE +C E+MQ
Sbjct: 741 HFPESSDMQNRQKMKE--FLQFSKDHKE-WEMKPGDPIPDEDVLRGYVKPEDICLLEAMQ 797
Query: 893 AGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTN 952
G L G + + E Q+ PW + NF+ T
Sbjct: 798 VGQQHLHDAGYDRDE--------------DDADDDEKEGESSEQQLAPWKTTRNFLLAT- 842
Query: 953 QDRENIERLEITGVGDPSGRGLGFSYVRAAPKA 985
+ L++ G GDP+GRG GFS+++ + K
Sbjct: 843 ---QGKAMLQLHGEGDPTGRGEGFSFIKTSMKG 872
>gi|401827715|ref|XP_003888150.1| transcription initiation factor TFIID subunit TAF1 [Encephalitozoon
hellem ATCC 50504]
gi|392999350|gb|AFM99169.1| transcription initiation factor TFIID subunit TAF1 [Encephalitozoon
hellem ATCC 50504]
Length = 882
Score = 161 bits (407), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 116/331 (35%), Positives = 162/331 (48%), Gaps = 42/331 (12%)
Query: 655 KKKSDLSVKDGHVF-LMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCL 713
KK +L++KDG F L EY EE P L N+GM + L YY+KS+ D+
Sbjct: 307 KKSGELTIKDGSPFSLFEYSEEDPFFLVNSGMVSLLNIYYRKSNARDEYAP-------DQ 359
Query: 714 GNVLTLEPGDKSPFLG--DIKAGCSQSSLETNMYRAPVFTHKVATTDFLLV--RSAKGKI 769
L+P D SPF G D+ G S +L N++ APVF H ++ D+L + S G+
Sbjct: 360 SQYTVLDPEDPSPFFGFGDVAPGTSIQALTNNLFIAPVFKH--SSGDYLCIVESSPDGEF 417
Query: 770 SIRR-IDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVD 828
+ R ID + V QQ PL EV +P S+ L + NR+ V +R F++ K G + +
Sbjct: 418 LVYRGIDNLYCVGQQFPLEEVYAPHSRKLNIFCKNRLKVAAFRLFNS--KEGGNKELRIS 475
Query: 829 ELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSY 888
+L FP SE RK LKE A + G VW ++ + + E DLRKL PE++C Y
Sbjct: 476 QLDEMFPYFSEGSKRKWLKEYADCVKKGRD-NVWVLRPSSALLGEEDLRKLVTPENICQY 534
Query: 889 ESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFV 948
ESM AG +L+ G + + +P PW LS NFV
Sbjct: 535 ESMLAGERKLQDSGYKMVVESDDEENEEEMVP------------------PPWCLSRNFV 576
Query: 949 -ACTNQDRENIERLEITGVGDPSGRGLGFSY 978
AC + LE+ G GDP+G G GFS+
Sbjct: 577 NACNGRG-----LLELNGPGDPTGIGEGFSF 602
>gi|50287907|ref|XP_446383.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525691|emb|CAG59310.1| unnamed protein product [Candida glabrata]
Length = 1039
Score = 160 bits (406), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 113/340 (33%), Positives = 166/340 (48%), Gaps = 41/340 (12%)
Query: 653 AFKKKSDLSVKD-GHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNN 711
+F DL+V D ++LME+ EE PL LS GMG L YY+K S D L G
Sbjct: 493 SFATTPDLTVGDTAPIYLMEFSEENPLALSKFGMGNKLINYYRKISEEDTLRPKLPVGET 552
Query: 712 CLGNVLTLEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKI 769
+VL ++ DKSPF G ++ G +L NM RAPVF H+V+ TDFLLVRS I
Sbjct: 553 ---HVLGVQ--DKSPFWNFGLVEPGHIVPTLYNNMLRAPVFKHEVSGTDFLLVRSTGNGI 607
Query: 770 S----IRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCI 825
S +R I+ + V Q P+ E+ P S+ + + R+ + VYR + A+ R I
Sbjct: 608 SNRFYLRNINHLFTVGQTFPVDEIPGPNSRRVTSMKAIRLRMIVYRLLNKASTR----SI 663
Query: 826 GVDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHV 885
+D ++V FP R+K+KE +R+G K +W +K + +++KL PE V
Sbjct: 664 SIDPIAVHFPEAEYGQNRQKIKEFMKYQREGPDKGLWRLKEGEPLLDGENIKKLLTPEQV 723
Query: 886 CSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSS 945
E M G+ D + ++ E +TPWN+S
Sbjct: 724 AEVEVMGHGI---------------------QNQDDNEVFNFDNDLVKLEESLTPWNISK 762
Query: 946 NFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKA 985
NF+ T Q R + +I G GDP+G G GFS+++ + K
Sbjct: 763 NFINAT-QMRAMV---QIHGAGDPTGCGEGFSFLKTSMKG 798
>gi|240275788|gb|EER39301.1| transcription factor TFIID complex subunit Taf111 [Ajellomyces
capsulatus H143]
Length = 1116
Score = 160 bits (406), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 110/333 (33%), Positives = 163/333 (48%), Gaps = 37/333 (11%)
Query: 660 LSVKDG-HVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLT 718
LS+ D +V L+EY EE P ++SN GMG+ L YY++ + D A +G
Sbjct: 571 LSLSDNSNVLLLEYSEEHPTMMSNFGMGSRLINYYRRKNMEDPARP-----KAEIGETAV 625
Query: 719 LEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKG----KISIR 772
L P DKSPF G I G + +++ T M+RAPVF + TDFL++R++ G IR
Sbjct: 626 LLPQDKSPFSIFGHIDPGETSAAITTAMFRAPVFQQEPKPTDFLVIRNSTGIDGSSYYIR 685
Query: 773 RIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSV 832
I+ + VV QQ P ++V P S+ + T S NR+ + YR KR + V +++
Sbjct: 686 NIENLYVVGQQFPSVDVPGPHSRKVTTASKNRLKMICYRLL----KRNKKHRVSVADITE 741
Query: 833 QFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQ 892
FP S+ R+K+KE FL+ + K+ W MK IP E LR PE +C E+MQ
Sbjct: 742 HFPESSDMQNRQKMKE--FLQFSKDHKE-WEMKPGDPIPDEDVLRGYVKPEDICLLEAMQ 798
Query: 893 AGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTN 952
G L G + + E Q+ PW + NF+ T
Sbjct: 799 VGQQHLHDAGYDRDE--------------DDADDDEKEGESSEQQLAPWKTTRNFLLAT- 843
Query: 953 QDRENIERLEITGVGDPSGRGLGFSYVRAAPKA 985
+ L++ G GDP+GRG GFS+++ + K
Sbjct: 844 ---QGKAMLQLHGEGDPTGRGEGFSFIKTSMKG 873
>gi|303391054|ref|XP_003073757.1| transcription initiation factor TFIID subunit TAF1 [Encephalitozoon
intestinalis ATCC 50506]
gi|303302905|gb|ADM12397.1| transcription initiation factor TFIID subunit TAF1 [Encephalitozoon
intestinalis ATCC 50506]
Length = 882
Score = 160 bits (405), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 116/331 (35%), Positives = 164/331 (49%), Gaps = 42/331 (12%)
Query: 655 KKKSDLSVKDGHVF-LMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCL 713
KK +L++KDG F L EY EE P L N GM + L YY+KS+ D+
Sbjct: 307 KKAGELTIKDGGPFSLFEYSEEEPFFLVNPGMVSLLNIYYRKSNVRDEYAP-------DQ 359
Query: 714 GNVLTLEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLV--RSAKGK- 768
L+P D SPF GD+ G S ++ N++ APVF H ++ D+L + SA G+
Sbjct: 360 SQYTILDPEDPSPFSGFGDVMPGTSIQAITNNLFIAPVFKH--SSRDYLCIVESSADGEF 417
Query: 769 ISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVD 828
++ R ID + V QQ PL EV +P S+ L + NR+ V +R F++ K G + +
Sbjct: 418 LTYRNIDNLYCVGQQFPLEEVYAPHSRKLNIFCKNRLKVAAFRLFNS--KVGGSKELRIS 475
Query: 829 ELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSY 888
+L FP SE RK LKE A + G VW ++ + + E DLRKL PE++C Y
Sbjct: 476 QLDEMFPYFSEGSKRKWLKEYADCVKKGRD-NVWVLRPSSALLGEEDLRKLVTPENICQY 534
Query: 889 ESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFV 948
ESM AG +L+ G + + +P PW LS NFV
Sbjct: 535 ESMLAGERKLQDSGYKMVVESDDEENEEEMVP------------------PPWCLSRNFV 576
Query: 949 -ACTNQDRENIERLEITGVGDPSGRGLGFSY 978
AC + LE++G GDP+G G GFS+
Sbjct: 577 NACNGRG-----LLELSGPGDPTGIGEGFSF 602
>gi|325093155|gb|EGC46465.1| transcription factor TFIID [Ajellomyces capsulatus H88]
Length = 1117
Score = 160 bits (405), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 110/333 (33%), Positives = 163/333 (48%), Gaps = 37/333 (11%)
Query: 660 LSVKDG-HVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLT 718
LS+ D +V L+EY EE P ++SN GMG+ L YY++ + D A +G
Sbjct: 572 LSLSDNSNVLLLEYSEEHPTMMSNFGMGSRLINYYRRKNMEDPARP-----KAEIGETAV 626
Query: 719 LEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKG----KISIR 772
L P DKSPF G I G + +++ T M+RAPVF + TDFL++R++ G IR
Sbjct: 627 LLPQDKSPFSIFGHIDPGETSAAITTAMFRAPVFQQEPKPTDFLVIRNSTGIDGSSYYIR 686
Query: 773 RIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSV 832
I+ + VV QQ P ++V P S+ + T S NR+ + YR KR + V +++
Sbjct: 687 NIENLYVVGQQFPSVDVPGPHSRKVTTASKNRLKMICYRLL----KRNKKHRVSVADITE 742
Query: 833 QFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQ 892
FP S+ R+K+KE FL+ + K+ W MK IP E LR PE +C E+MQ
Sbjct: 743 HFPESSDMQNRQKMKE--FLQFSKDHKE-WEMKPGDPIPDEDVLRGYVKPEDICLLEAMQ 799
Query: 893 AGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTN 952
G L G + + E Q+ PW + NF+ T
Sbjct: 800 VGQQHLHDAGYDRDE--------------DDADDDEKEGESSEQQLAPWKTTRNFLLAT- 844
Query: 953 QDRENIERLEITGVGDPSGRGLGFSYVRAAPKA 985
+ L++ G GDP+GRG GFS+++ + K
Sbjct: 845 ---QGKAMLQLHGEGDPTGRGEGFSFIKTSMKG 874
>gi|380490048|emb|CCF36290.1| transcription initiation factor TFIID subunit 1, partial
[Colletotrichum higginsianum]
Length = 1229
Score = 160 bits (405), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 135/462 (29%), Positives = 199/462 (43%), Gaps = 83/462 (17%)
Query: 653 AFKKKSDLSVKDGHV-FLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNN 711
FK DL + D L EYCE P +LSN GMG + YY+K D+
Sbjct: 507 VFKTTKDLGITDNSTAVLFEYCERTPPVLSNFGMGNRVINYYRKKKMDDEE----TPPKM 562
Query: 712 CLGNVLTLEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKG-- 767
+G L P D+SPF G+++ G + +L MYRAP+F HK +TDFL VRS+ G
Sbjct: 563 EIGESHVLLPEDRSPFAIFGEVEVGQTMPTLHNQMYRAPIFKHKPRSTDFLCVRSSTGVD 622
Query: 768 --KISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCI 825
+ +ID + VV Q P +EV P S+ + S NR+ + YR +R +
Sbjct: 623 GSSWYLHKIDHLYVVGQTFPSVEVPGPHSRKVTNASKNRIKMISYR----MMRRNEHSLV 678
Query: 826 GVDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHV 885
+ E++ + ++A R+KLKE FL K +W ++ + E +R + PE V
Sbjct: 679 NLSEVTKHIADSTDAQNRQKLKE--FLVYAKVEKGLWGLRPNEQLMDENSIRAMIKPEDV 736
Query: 886 CSYESMQAGLYRLKHLGI----TQLTLPASISSAMSQLPDEAIALA-----AASHIEREL 936
C + MQ G+ L+ G L ++ A AA E +L
Sbjct: 737 CLIDGMQLGMQMLEDAGFDPNNVNLEEENEEAAEEDDEERTGAGTAKGSKKAAEKNEEKL 796
Query: 937 --QITPWNLSSNFV-ACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVK 993
++ PW S F+ AC + L++ G GDP+G GLGFS++R + K + K
Sbjct: 797 ADKMAPWKTSKAFIDACAGK-----AMLKLHGQGDPTGHGLGFSFIRTSMKGGYIETVQK 851
Query: 994 KKAAANRGGSTVTGTDA-----DLRRLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRK 1048
GGS T DA D +R+ A +NV E+
Sbjct: 852 -------GGSHTTAADAMAAHPDTQRMKNGHA------YNVKEQ---------------- 882
Query: 1049 LSSEQAASGVQLQQQTRGKCQEIWDRQVQSL---SAADDDEI 1087
+Q R +EIWD+Q SL + DDD +
Sbjct: 883 ------------EQMYRKGIREIWDKQKASLEDGTEKDDDLV 912
>gi|116181494|ref|XP_001220596.1| hypothetical protein CHGG_01375 [Chaetomium globosum CBS 148.51]
gi|88185672|gb|EAQ93140.1| hypothetical protein CHGG_01375 [Chaetomium globosum CBS 148.51]
Length = 1126
Score = 160 bits (404), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 115/396 (29%), Positives = 190/396 (47%), Gaps = 51/396 (12%)
Query: 625 IHLIRTKIHLLPRAQKLPGENKSLRPPGAFKKKSDLSVKDGHV-FLMEYCEERPLLLSNA 683
H I+ K L R ++L G+ S F+ SDL++ D L EYCEE P++LSN
Sbjct: 470 FHPIKLKPPTLKRKKQLKGKRIS----EIFQSSSDLTMNDNSTAILFEYCEEIPIVLSNF 525
Query: 684 GMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLTLEPGDKSPF--LGDIKAGCSQSSLE 741
GMG + YY++S G LG L P D+SPF +G + G + +L
Sbjct: 526 GMGQKIINYYRRSK-----GTDARPEKRELGEPYILMPEDRSPFAMVGQVHPGETVPTLH 580
Query: 742 TNMYRAPVFTHKVATTDFLLVRSAKGKIS----IRRIDKVAVVAQQEPLMEVMSPGSKNL 797
M+RAP+F H +TDF+L RS+ GK +R ID + VV Q P MEV P S+ +
Sbjct: 581 NQMFRAPIFKHSPRSTDFILGRSSTGKSGSSWYLRNIDHLYVVGQILPSMEVPGPHSRRV 640
Query: 798 QTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLSEAIIRKKLKECAFLRRDGN 857
+ NR+ + YR + + + +++ + +E+ R+KLKE R++
Sbjct: 641 TNIAKNRLKMVSYRLLHRSDN------VTLTDITRHVADSNESQNRQKLKEFLMFRKE-- 692
Query: 858 GKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRLKHLG--ITQLTLPASISSA 915
++ W + + E ++R+L PE VC ++MQ G + L++ G +
Sbjct: 693 -QRNWVLPEGEELMPESEIRELVRPEEVCLLDAMQIGAHELENGGYEVNDAVFKDDDLMD 751
Query: 916 MSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLG 975
+LP +A+A ++ PW L+ F+ ++ + + G GDP+G+GLG
Sbjct: 752 GDELPPDALA----------NKMAPWRLTKAFIDASH----GKAMIAVHGPGDPTGKGLG 797
Query: 976 FSYVRAAPKA----------SVSSAMVKKKAAANRG 1001
SY+R + K + S+ ++++ AN G
Sbjct: 798 VSYLRTSMKGGFLEQLHGPLATSADAIERQRKANGG 833
>gi|367019190|ref|XP_003658880.1| TAF1-like protein [Myceliophthora thermophila ATCC 42464]
gi|347006147|gb|AEO53635.1| TAF1-like protein [Myceliophthora thermophila ATCC 42464]
Length = 1150
Score = 159 bits (403), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 111/379 (29%), Positives = 182/379 (48%), Gaps = 61/379 (16%)
Query: 649 RPPGAFKKKSDLSVKDGHV-FLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLC 707
R P F+ SDL++ D L EYCEE P++LSN GMG + YY++S G
Sbjct: 512 RIPEIFQTSSDLTMNDNSTAILFEYCEEIPIVLSNFGMGQKIINYYRRSK-----GTDAR 566
Query: 708 SGNNCLGNVLTLEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSA 765
LG L P D+SPF +G + G + +L M+RAP+F H +TDF+L RS
Sbjct: 567 PEKRELGEPYILMPEDRSPFAMVGQVHPGETVPTLHNQMFRAPIFKHTPRSTDFILGRST 626
Query: 766 KGK----ISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGL 821
G+ +R ID + VV Q P MEV P S+ + + NR+ + YR +
Sbjct: 627 TGRNGSTWYLRNIDHLFVVGQILPSMEVPGPHSRRVTNIAKNRLKMVSYRLLHRSDN--- 683
Query: 822 LPCIGVDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAY 881
+ + +++ + +E+ R+KLKE R++ ++ W + + E ++R+L
Sbjct: 684 ---VTLTDITRHVADSNESQNRQKLKEFLVFRKE---QRNWVLPEGEELMPESEIRELVR 737
Query: 882 PEHVCSYESMQAGLYRLKHLGITQLTLPASISSAM---------SQLPDEAIALAAASHI 932
PE VC ++MQ G + L++ G I+ AM +LP +A+A
Sbjct: 738 PEEVCLLDAMQVGAHELENGGY-------EINDAMFKDDDVMEGDELPPDALA------- 783
Query: 933 ERELQITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKA------- 985
++ PW L+ F+ ++ + + G GDP+G+GLG SY+R + K
Sbjct: 784 ---NKMAPWRLTKAFIDASH----GKAMIAVHGPGDPTGKGLGVSYLRTSMKGGFLEQLH 836
Query: 986 ---SVSSAMVKKKAAANRG 1001
+ S+ ++++ AN G
Sbjct: 837 GPLATSADAIERQRKANGG 855
>gi|261195212|ref|XP_002624010.1| transcription factor TFIID complex 145 kDa subunit [Ajellomyces
dermatitidis SLH14081]
gi|239587882|gb|EEQ70525.1| transcription factor TFIID complex 145 kDa subunit [Ajellomyces
dermatitidis SLH14081]
Length = 1094
Score = 159 bits (402), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 110/339 (32%), Positives = 163/339 (48%), Gaps = 37/339 (10%)
Query: 654 FKKKSDLSVKDG-HVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNC 712
+ LS+ D HV L+EY EE P ++SN GMG+ L YY++ + D A +
Sbjct: 563 YNSTKSLSLADNSHVLLLEYSEEHPTMMSNFGMGSRLINYYRRKNMEDPARP-----KSE 617
Query: 713 LGNVLTLEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKG--- 767
+G L P DKSPF G I G + +++ T M+RAPVF + TDFL++R++ G
Sbjct: 618 IGETTVLLPQDKSPFSIFGHIDPGETTAAIATAMFRAPVFQQESKPTDFLVIRNSTGVDG 677
Query: 768 -KISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIG 826
IR ID + V QQ P ++V P S+ + T S NR+ + YR +R +
Sbjct: 678 SSYYIRNIDNLYVAGQQFPSVDVPGPHSRKVTTASKNRLKMICYRLL----RRNKNHRVS 733
Query: 827 VDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVC 886
V E++ FP S+ R+K+KE FL+ + K+ W MK IP E L PE +C
Sbjct: 734 VAEVTEHFPESSDMQNRQKMKE--FLQFSKDHKE-WEMKPGDPIPDEDVLHGYVKPEDIC 790
Query: 887 SYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSN 946
E+MQ G L G + + E Q+ PW + N
Sbjct: 791 LLEAMQVGQQHLHDAGYDRDD--------------DDADDEEKEGETSEQQLAPWKTTRN 836
Query: 947 FVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKA 985
F+ T + L++ G GDP+GRG GFS+++ + K
Sbjct: 837 FLLAT----QGKAMLQLHGEGDPTGRGEGFSFIKTSMKG 871
>gi|327348937|gb|EGE77794.1| hypothetical protein BDDG_00731 [Ajellomyces dermatitidis ATCC
18188]
Length = 1113
Score = 159 bits (402), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 110/339 (32%), Positives = 163/339 (48%), Gaps = 37/339 (10%)
Query: 654 FKKKSDLSVKDG-HVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNC 712
+ LS+ D HV L+EY EE P ++SN GMG+ L YY++ + D A +
Sbjct: 563 YNSTKSLSLADNSHVLLLEYSEEHPTMMSNFGMGSRLINYYRRKNMEDPARP-----KSE 617
Query: 713 LGNVLTLEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKG--- 767
+G L P DKSPF G I G + +++ T M+RAPVF + TDFL++R++ G
Sbjct: 618 IGETTVLLPQDKSPFSIFGHIDPGETTAAIATAMFRAPVFQQESKPTDFLVIRNSTGVDG 677
Query: 768 -KISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIG 826
IR ID + V QQ P ++V P S+ + T S NR+ + YR +R +
Sbjct: 678 SSYYIRNIDNLYVAGQQFPSVDVPGPHSRKVTTASKNRLKMICYRLL----RRNKNHRVS 733
Query: 827 VDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVC 886
V E++ FP S+ R+K+KE FL+ + K+ W MK IP E L PE +C
Sbjct: 734 VAEVTEHFPESSDMQNRQKMKE--FLQFSKDHKE-WEMKPGDPIPDEDVLHGYVKPEDIC 790
Query: 887 SYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSN 946
E+MQ G L G + + E Q+ PW + N
Sbjct: 791 LLEAMQVGQQHLHDAGYDRDD--------------DDADDEEKEGETSEQQLAPWKTTRN 836
Query: 947 FVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKA 985
F+ T + L++ G GDP+GRG GFS+++ + K
Sbjct: 837 FLLAT----QGKAMLQLHGEGDPTGRGEGFSFIKTSMKG 871
>gi|299756125|ref|XP_002912169.1| atypical/TAF1 protein kinase [Coprinopsis cinerea okayama7#130]
gi|298411533|gb|EFI28675.1| atypical/TAF1 protein kinase [Coprinopsis cinerea okayama7#130]
Length = 1054
Score = 159 bits (402), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 134/457 (29%), Positives = 199/457 (43%), Gaps = 87/457 (19%)
Query: 653 AFKKKSDLSVKDGHVFLM-EYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNN 711
A +K +DLS++D F++ EY EE P ++SN GMG+ L YY+K D+
Sbjct: 425 ALRKTADLSLRDTSNFVLWEYSEEHPPIISNFGMGSALVNYYRKKDEKDE-----YVPKA 479
Query: 712 CLGNVLTLEPGDKSPFL--GDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVR-SAKG- 767
LG LEP D+SPF+ G + G + L N+ RAP+F HK +TDFL++R + KG
Sbjct: 480 DLGIPFVLEPQDESPFMKFGYVYPGQTFPVLYNNLVRAPLFRHKPESTDFLVIRNTVKGE 539
Query: 768 -KISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIG 826
K IR I + V+ Q P+ EV P S+ + +R+ + ++ + L
Sbjct: 540 SKYYIREIKNLFVIGQTYPVTEVPGPHSRKITNTIKHRLQIIAFKLLKKSQGERL----K 595
Query: 827 VDELSVQFPNLSEAIIRKKLKEC------AFLRRDGNGKQVWSMKRTFHIPSEGD--LRK 878
+ L FP+ +E +R++LK C F + N + WS HI GD + K
Sbjct: 596 ISRLMKYFPDQNELQMRQRLKACCTITSPTFTFTNFNTRNSWSTTAEAHIKVSGDAEMLK 655
Query: 879 LAYPEHVCSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQI 938
+ PE V ESMQ G L+ G +Q A +S DE S + E Q+
Sbjct: 656 MVGPEQVVLTESMQVGQRHLQDAGYSQ----AEVSDG-----DE-------SKLSVEQQL 699
Query: 939 TPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAA 998
PW + NF+ T L + G GDPSGRG FS++R S+ VK
Sbjct: 700 APWITTKNFLYATQAK----AMLRLHGEGDPSGRGEAFSFIR----ISMKDIFVK----- 746
Query: 999 NRGGSTVTGTDADLRRLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASGV 1058
G D + + E+ + ++NV E+
Sbjct: 747 -------AGEDYEQKLAEAESRPKSAHRYNVAEQ-------------------------- 773
Query: 1059 QLQQQTRGKCQEIWDRQVQSLSAADDDEIGSDSEHSD 1095
QQ + + + IW Q SLS D E+ + E D
Sbjct: 774 --QQIYKSEIERIWKAQYDSLSRTDKPELTEEDERRD 808
>gi|239610629|gb|EEQ87616.1| transcription factor TFIID complex 145 kDa subunit [Ajellomyces
dermatitidis ER-3]
Length = 1094
Score = 159 bits (402), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 110/339 (32%), Positives = 163/339 (48%), Gaps = 37/339 (10%)
Query: 654 FKKKSDLSVKDG-HVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNC 712
+ LS+ D HV L+EY EE P ++SN GMG+ L YY++ + D A +
Sbjct: 563 YNSTKSLSLADNSHVLLLEYSEEHPTMMSNFGMGSRLINYYRRKNMEDPARP-----KSE 617
Query: 713 LGNVLTLEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKG--- 767
+G L P DKSPF G I G + +++ T M+RAPVF + TDFL++R++ G
Sbjct: 618 IGETTVLLPQDKSPFSIFGHIDPGETTAAIATAMFRAPVFQQESKPTDFLVIRNSTGVDG 677
Query: 768 -KISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIG 826
IR ID + V QQ P ++V P S+ + T S NR+ + YR +R +
Sbjct: 678 SSYYIRNIDNLYVAGQQFPSVDVPGPHSRKVTTASKNRLKMICYRLL----RRNKNHRVS 733
Query: 827 VDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVC 886
V E++ FP S+ R+K+KE FL+ + K+ W MK IP E L PE +C
Sbjct: 734 VAEVTEHFPESSDMQNRQKMKE--FLQFSKDHKE-WEMKPGDPIPDEDVLHGYVKPEDIC 790
Query: 887 SYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSN 946
E+MQ G L G + + E Q+ PW + N
Sbjct: 791 LLEAMQVGQQHLHDAGYDRDD--------------DDADDEEKEGETSEQQLAPWKTTRN 836
Query: 947 FVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKA 985
F+ T + L++ G GDP+GRG GFS+++ + K
Sbjct: 837 FLLAT----QGKAMLQLHGEGDPTGRGEGFSFIKTSMKG 871
>gi|396082269|gb|AFN83879.1| transcription initiation factor TFIID subunit [Encephalitozoon
romaleae SJ-2008]
Length = 879
Score = 159 bits (402), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 116/331 (35%), Positives = 161/331 (48%), Gaps = 42/331 (12%)
Query: 655 KKKSDLSVKDGHVF-LMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCL 713
KK +L+VKDG F L EY EE P L N+GM + L YY+KS+ D+
Sbjct: 304 KKAGELTVKDGSPFSLFEYSEEDPFFLVNSGMVSLLNIYYRKSNARDEYAP-------DQ 356
Query: 714 GNVLTLEPGDKSPFLG--DIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAK--GKI 769
L+P D SPF G D+ G S +L N++ APVF H ++ D+L + + G+
Sbjct: 357 SQYTVLDPEDPSPFFGFGDVAPGTSIQALTNNLFIAPVFKH--SSGDYLCIAESAPDGEF 414
Query: 770 SI-RRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVD 828
+ R ID + V QQ PL EV +P S+ L + NR+ V +R F+ K G + +
Sbjct: 415 LVYRSIDNLYCVGQQFPLEEVYAPHSRKLNIFCKNRLKVAAFRLFNN--KEGGNKELRIS 472
Query: 829 ELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSY 888
+L FP SE RK LKE A + G VW ++ + + E DLRKL PE++C Y
Sbjct: 473 QLDEMFPYFSEGSKRKWLKEYADCVKKGRD-NVWVLRPSSALLGEEDLRKLVTPENICQY 531
Query: 889 ESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFV 948
ESM AG +L+ G + + +P PW LS NFV
Sbjct: 532 ESMLAGERKLQDSGYKMVVESDDEENEEEMVP------------------PPWCLSRNFV 573
Query: 949 -ACTNQDRENIERLEITGVGDPSGRGLGFSY 978
AC + LE+ G GDP+G G GFS+
Sbjct: 574 NACNGRG-----LLELNGPGDPTGIGEGFSF 599
>gi|328766409|gb|EGF76463.1| hypothetical protein BATDEDRAFT_36239 [Batrachochytrium
dendrobatidis JAM81]
Length = 1343
Score = 159 bits (402), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 115/357 (32%), Positives = 169/357 (47%), Gaps = 37/357 (10%)
Query: 637 RAQKLPGENKSLRPPGAFKKKSDLSVKDGHVF-LMEYCEERPLLLSNAGMGANLCTYYQK 695
R + + K + P + D+S++D F L+EY EE PLL+ GM + + YY+K
Sbjct: 498 RPKAVKKRPKEIDPSDLMRTPKDISLRDTSKFVLVEYSEEYPLLMQTVGMASLIYNYYRK 557
Query: 696 SSPGDQAGALLCSGNNCLGNVLTLEPGDKSPFLG--DIKAGCSQSSLETNMYRAPVFTHK 753
D+ + NN G LE D SPF G D++ G ++ L N+ RAP+F
Sbjct: 558 K---DEKDNFVPKMNN--GGAYILESVDASPFFGFGDVRPGETRQVLYNNLLRAPIFPQN 612
Query: 754 VATTDFLLVR-SAKGKIS--IRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVY 810
A TDFL++R S GK+ IR I + V Q P+ EV P ++ + R+ V +
Sbjct: 613 AAPTDFLMIRHSYHGKVKYFIRDIPNMYSVGQIFPVQEVPRPQARKITQSLKQRLQVVSF 672
Query: 811 REFSAAAKRGLLPCIGVDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHI 870
R R L D + FP S+ IR+KLKE A + G W +K + +
Sbjct: 673 RLMWKDPFRRL----RFDRMKKFFPMFSDLQIRQKLKEFAQYLKKGENTGWWKLKSSVKL 728
Query: 871 PSEGDLRKLAYPEHVCSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAA-- 928
P E +RK+ PE VC Y+S G RL+ G D+ + L
Sbjct: 729 PDEDGIRKIITPEQVCLYQSTLVGQQRLRDAGYGN---------------DDLLDLQNEE 773
Query: 929 -ASHIERELQITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPK 984
S ++ E+Q+ PW + NFV + + + RL G GDP+G G GFSY+RA+ K
Sbjct: 774 DESTLDIEVQLAPWVTTKNFVIAASG--KGMVRL--FGRGDPTGCGEGFSYIRASMK 826
>gi|400598205|gb|EJP65925.1| transcription initiation factor TFIID, subunit TAF1 [Beauveria
bassiana ARSEF 2860]
Length = 1094
Score = 159 bits (401), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 109/360 (30%), Positives = 165/360 (45%), Gaps = 35/360 (9%)
Query: 654 FKKKSDLSVKDGHV-FLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNC 712
F K DL++ D L EYCE RP +L+N GMG L YY++ D+
Sbjct: 510 FLKSKDLTLGDNSTAVLFEYCEPRPRVLNNFGMGTKLINYYRRKDEKDEEQLPKLE---- 565
Query: 713 LGNVLTLEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKG--- 767
LG TL P D+SPF G + AG + +L MYRAPVF H T DFL+VR+ G
Sbjct: 566 LGEYRTLLPEDRSPFSLFGTVDAGETVPTLHNEMYRAPVFKHTPRTNDFLVVRNTTGVDG 625
Query: 768 -KISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIG 826
+ + +ID + VV Q P +EV P S+ + S NRM + +R +
Sbjct: 626 SRWYLHKIDHIHVVGQAFPSVEVPGPHSRKVTNASKNRMKMLAFRMI----RHSRTDNCQ 681
Query: 827 VDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVC 886
+ E++ + ++ R+KLKE RD K +W +K +P E +R + PE V
Sbjct: 682 LSEMTRHIADSTDTQNRQKLKEFLQYDRDSGEKGMWRLKPGEVLPDENAIRAMIKPEDVS 741
Query: 887 SYESMQAGLYRLKHLGI--------TQLTLPASISSAMSQLPDEAIALAAASHIERELQ- 937
++MQ G+ L+ G + P + + I AA + + +
Sbjct: 742 LLDAMQLGIKELEDAGYDPRNATIEDETQAPEDVDEDDGEDDSSKITKGAAKKAQEKQEE 801
Query: 938 -----ITPWNLSSNFV-ACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAM 991
+ PW + F+ AC + L++ G GDP+G GLGFS++R + K A+
Sbjct: 802 TLADKMAPWKTTKAFIDACAQK-----AMLQLHGEGDPTGHGLGFSFIRTSMKGGYIEAV 856
>gi|302415847|ref|XP_003005755.1| transcription initiation factor TFIID subunit 1 [Verticillium
albo-atrum VaMs.102]
gi|261355171|gb|EEY17599.1| transcription initiation factor TFIID subunit 1 [Verticillium
albo-atrum VaMs.102]
Length = 1106
Score = 159 bits (401), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 126/410 (30%), Positives = 181/410 (44%), Gaps = 48/410 (11%)
Query: 654 FKKKSDLSVKDG-HVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNC 712
F+ DL + D L EYCE P +LSN GMG + YY+K Q
Sbjct: 480 FQSTKDLGITDNCTAVLFEYCERTPPVLSNFGMGNRVINYYRKR----QVDEEEVPPKMD 535
Query: 713 LGNVLTLEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKG--- 767
+G L P D+SPF G++KAG + +L MYRAP+F H+ +TDFL VRS+ G
Sbjct: 536 VGESHVLHPEDRSPFAIFGEVKAGQTMPTLHNQMYRAPIFKHQPRSTDFLCVRSSTGVEG 595
Query: 768 -KISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIG 826
K I ID + VV Q P +EV P S+ + S NR+ + YR +R +
Sbjct: 596 SKWYIHNIDHLYVVGQTFPSVEVPGPHSRKVTNASKNRIKMMSYRMM----RRSPHSVVN 651
Query: 827 VDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVC 886
+ +++ ++A R+KLKE FL K W +K + E +R + PE VC
Sbjct: 652 LADITKHIAESTDAQNRQKLKE--FLVYAKMDKGQWKLKPGETLMDEAGIRAMVKPEDVC 709
Query: 887 SYESMQAGLYRLKHLGI----TQLTLPASISSAMSQLPDEAIALAAASHIEREL--QITP 940
+ MQ G+ L+ G L AA E +L ++ P
Sbjct: 710 LIDGMQLGMQILEDAGFDPNNVNLDEDNDDVEEEDDDRTAKGGKKAADKNEDKLADKMAP 769
Query: 941 WNLSSNFV-ACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAAN 999
W S F+ AC + L++ G GDP+G GLGFS++R + K + K
Sbjct: 770 WKTSKAFIDACAGK-----AMLKLHGEGDPTGHGLGFSFIRTSMKGGYIETVQK------ 818
Query: 1000 RGGSTVTGTDADLRRLSMEAAREVLLK------FNVPEEMIAKQTRWHRI 1043
GGS T DA M A + + K +NV E+ + + H I
Sbjct: 819 -GGSHTTAADA------MAAHPDAMRKAYNGHAYNVKEQEVMYKKGIHEI 861
>gi|354546448|emb|CCE43178.1| hypothetical protein CPAR2_208230 [Candida parapsilosis]
Length = 981
Score = 159 bits (401), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 117/358 (32%), Positives = 181/358 (50%), Gaps = 41/358 (11%)
Query: 654 FKKKSDLSVKD-GHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNC 712
F K +DL+V D ++ MEY E+ P ++SN GMG+ L YY+K SP D + G
Sbjct: 396 FVKTTDLTVADTANIITMEYTEQYPPIVSNFGMGSKLINYYRKRSPDDTSRPKAQFGET- 454
Query: 713 LGNVLTLEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRS----AK 766
+VL +E D+SPF G++ G +L NM RAP+F H+ TDFLL+RS +
Sbjct: 455 --HVLGVE--DRSPFWNFGEVYPGEFVPTLYNNMIRAPIFKHEPRNTDFLLIRSQGAGSH 510
Query: 767 GKISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIG 826
K +R ++ V P+ E+ +P S+ + S NR+ + VYR ++ P I
Sbjct: 511 QKYYLRSMNVNFAVGNIFPV-EIPAPHSRKVTNISKNRLKMIVYRVMNSKNA----PRIS 565
Query: 827 VDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFH-IPSEGDLRKLAYPEHV 885
V ++S FP ++ R++LKE +R G+ + W ++ IPSE ++R + PE
Sbjct: 566 VKDVSKHFPEQTDMQNRQRLKEFMEYQRQGDDQGFWKVRGMNDVIPSEEEIRSMITPEDS 625
Query: 886 CSYESMQAGLYRLKHLGIT---QLTLPASISSAMSQLPDEAIALAAASH----------- 931
++MQ G L+ + + + L ++ ++ DEA A +
Sbjct: 626 SLMDAMQFGQQALEDMAMLFGDESKLMSNRKRKETEKKDEANEDATETEESRREKERKRN 685
Query: 932 -----IERELQITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPK 984
IE E ++ PWNLS NFV NQ + L++ G GDPSG GLG+S +RA K
Sbjct: 686 KEQDDIEAEEEMAPWNLSRNFVVA-NQTK---AMLQLNGEGDPSGIGLGYSMLRATQK 739
>gi|449550871|gb|EMD41835.1| hypothetical protein CERSUDRAFT_102229 [Ceriporiopsis subvermispora
B]
Length = 1062
Score = 158 bits (400), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 107/335 (31%), Positives = 170/335 (50%), Gaps = 34/335 (10%)
Query: 656 KKSDLSVKDGHVFLM-EYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLG 714
K DLS++D F++ E+ EE P ++SN GMG+ L YY+K + D+ + LG
Sbjct: 415 KTGDLSLRDTSNFVLWEFSEEHPPIISNFGMGSILVNYYRKKNEKDE-----HVPKSDLG 469
Query: 715 NVLTLEPGDKSPFL--GDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSA-KG--KI 769
+ +EP D+SPF+ G + G + +L N+ RAP+F K TDFL++RS KG +
Sbjct: 470 EPIVIEPQDESPFMKFGYVYPGQTVPALYNNLIRAPLFRQKPYHTDFLVIRSTVKGETRY 529
Query: 770 SIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDE 829
IR I + VV Q P+ EV P S+ + +R+ + ++ +++ L +
Sbjct: 530 YIRDIKNLFVVGQTYPVTEVPGPHSRKITNTIKHRLQIIAFKLLQKSSEERL----KISR 585
Query: 830 LSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYE 889
L FP+ +E +R++LKE R G + W +K T+ IP + D+ K+ PE V E
Sbjct: 586 LMKYFPDQNELQMRQRLKEFMEYHRRGPHQGFWRLKPTWQIPPDADMVKMVTPEQVVLSE 645
Query: 890 SMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVA 949
SMQ G L+ G S S +++ + +++ E Q+ PW + NF+
Sbjct: 646 SMQVGQRHLQDAGY-------SFSGEVAEDDEGDLSI--------EQQLAPWITTKNFLF 690
Query: 950 CTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPK 984
T L + G GDP+GRG FS+VR + K
Sbjct: 691 ATQAK----AMLRLHGDGDPTGRGEAFSFVRVSMK 721
>gi|440632378|gb|ELR02297.1| hypothetical protein GMDG_05366 [Geomyces destructans 20631-21]
Length = 1087
Score = 158 bits (400), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 114/384 (29%), Positives = 177/384 (46%), Gaps = 47/384 (12%)
Query: 632 IHLLPRAQKLPGENKSLRPPGAFKKKSDLSVKDGHV-FLMEYCEERPLLLSNAGMGANLC 690
I+ AQ+ K L FK+ DLS+ D L+EY EE P +LSN GMG +
Sbjct: 484 IYFSKPAQRKRKHMKGLSTQEIFKESKDLSLADNSTAMLLEYSEEHPTVLSNFGMGNRII 543
Query: 691 TYYQKSSPGDQAGALLCSGNNCLGNVLTLEPGDKSPF--LGDIKAGCSQSSLETNMYRAP 748
YY++ D N +G L P D+SPF G ++ G + +L M+RAP
Sbjct: 544 NYYRRKDADD-----ALRPKNEIGETSVLMPEDRSPFAQFGTVEPGETVPTLHNAMFRAP 598
Query: 749 VFTHKVATTDFLLVRSAKG----KISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINR 804
VF + TDFL++R+ G IR ID + V QQ P ME+ P S+ + S +R
Sbjct: 599 VFKQEPKNTDFLVIRNTTGVNGTSWHIRNIDNIYAVGQQLPSMEIPGPQSRKVTNASKSR 658
Query: 805 MLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSM 864
M + +R+ + + +DE++ + S+ R+KLKE +D ++VW +
Sbjct: 659 MKMIAFRKI----RHNPANTVRIDEITSHITDSSDMQNRQKLKEFIKYYKD---EKVWRV 711
Query: 865 KRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAI 924
K IP E +R PE VC+ ++MQ GL L+ G + S+ E
Sbjct: 712 KPGDVIPDETTVRSWVKPEDVCTIDAMQVGLRHLEDAGYGR-----DNRDDGSEEEQEGD 766
Query: 925 ALAAASHIERELQITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAA-- 982
+L E + PW S NF+ L++ G GDP+G GL FS+++ +
Sbjct: 767 SL--------EQLLAPWKTSKNFLDAA----AGKAMLQLHGEGDPTGCGLAFSFIKTSMK 814
Query: 983 ---------PKASVSSAMVKKKAA 997
P+A+ A+ +++ A
Sbjct: 815 GGYLDTIQGPQATTEDAIARERKA 838
>gi|258574655|ref|XP_002541509.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237901775|gb|EEP76176.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 1106
Score = 158 bits (399), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 105/338 (31%), Positives = 167/338 (49%), Gaps = 37/338 (10%)
Query: 660 LSVKDG-HVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLT 718
LS+ D HV L+EY EE P+++SN GMG+ + YY+K + D ++ G +G
Sbjct: 532 LSLADNSHVLLLEYSEEHPMMMSNFGMGSRVINYYRKKNAED---SMRPKGE--IGETAV 586
Query: 719 LEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKG----KISIR 772
L P DKSPF G + G + +++ T M+ APVF + TDFL+VR++ G +R
Sbjct: 587 LLPEDKSPFSTFGHVDPGETTTAIATGMFLAPVFRQESKNTDFLVVRNSTGVDGASYYLR 646
Query: 773 RIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSV 832
I+ + V QQ P ++V P S+ + T + NR+ + YR+ ++ + V +++
Sbjct: 647 NIENLYVAGQQFPSVDVPGPHSRKVTTAAKNRLKMICYRQI----RKNRNHRVSVADITE 702
Query: 833 QFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQ 892
FP ++ R+K+KE FL+ + K+ W MK IP E LR PE +C ESMQ
Sbjct: 703 HFPESTDMQNRQKMKE--FLQFSKDHKE-WEMKPGEPIPDEDVLRGYVKPEDICLLESMQ 759
Query: 893 AGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTN 952
GL L G + + E Q+ PW + NF+ +
Sbjct: 760 VGLQYLHDAGYDREE--------------DEDDDGDKEGDSLEQQLAPWKATRNFLLAS- 804
Query: 953 QDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSA 990
+ L++ G GDP+GRG GFS+++ + K +
Sbjct: 805 ---QGKAMLQLHGEGDPTGRGEGFSFIKTSMKGGFRAV 839
>gi|448511647|ref|XP_003866577.1| Taf145 protein [Candida orthopsilosis Co 90-125]
gi|380350915|emb|CCG21138.1| Taf145 protein [Candida orthopsilosis Co 90-125]
Length = 1028
Score = 158 bits (399), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 117/361 (32%), Positives = 179/361 (49%), Gaps = 48/361 (13%)
Query: 654 FKKKSDLSVKD-GHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNC 712
F K +DL+V D ++ +EY E+ P +LSN GMG+ L YY+K SP D + G
Sbjct: 439 FAKTTDLTVADTANMITLEYAEQYPPILSNFGMGSKLINYYRKRSPDDSSRPKAQFGET- 497
Query: 713 LGNVLTLEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRS----AK 766
+VL +E D+SPF G++ G +L NM RAP+F H+ +TDFLL+RS +
Sbjct: 498 --HVLGVE--DRSPFWNFGEVSPGEFVPTLYNNMVRAPIFKHEPRSTDFLLIRSQGAGSH 553
Query: 767 GKISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIG 826
K +R ++ V P+ E+ +P S+ + S NR+ + VYR ++ P I
Sbjct: 554 QKYYLRTMNVNFAVGNVFPV-EIPAPHSRKVTNISKNRLKMIVYRVMNSKGA----PRIS 608
Query: 827 VDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFH-IPSEGDLRKLAYPEHV 885
V ++S FP ++ R++LKE +R G+ + W ++ IP+E D+R + PE
Sbjct: 609 VKDVSKHFPEQTDMQNRQRLKEFMEYQRQGDDQGFWKVRGMNDVIPTEEDIRSMITPEDS 668
Query: 886 CSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAAS--------------- 930
++MQ+G L+ + TL S MS + + +
Sbjct: 669 SLMDAMQSGQQALEDMA----TLFGDESKLMSNRKRKEMEKKEETTDPSESEESKREKEK 724
Query: 931 -------HIERELQITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAP 983
IE E ++ PWNLS NFV NQ + L++ G GDPSG GLG+S +RA
Sbjct: 725 KKNKEQDDIEAEEEMAPWNLSRNFVVA-NQTK---GMLQLNGEGDPSGIGLGYSMLRATQ 780
Query: 984 K 984
K
Sbjct: 781 K 781
>gi|346973806|gb|EGY17258.1| transcription initiation factor TFIID subunit 1 [Verticillium dahliae
VdLs.17]
Length = 1158
Score = 158 bits (399), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 125/410 (30%), Positives = 181/410 (44%), Gaps = 48/410 (11%)
Query: 654 FKKKSDLSVKDG-HVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNC 712
F+ DL + D L EYCE P +LSN GMG + YY+K Q
Sbjct: 526 FQSTKDLGITDNCTAVLFEYCERTPPVLSNFGMGNRVINYYRKR----QVDEEEVPPKMD 581
Query: 713 LGNVLTLEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKG--- 767
+G L P D+SPF G++KAG + +L MYRAP+F H+ +TDFL VRS+ G
Sbjct: 582 VGESHVLHPEDRSPFAIFGEVKAGQTMPTLHNQMYRAPIFKHQPRSTDFLCVRSSTGVEG 641
Query: 768 -KISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIG 826
K + ID + VV Q P +EV P S+ + S NR+ + YR +R +
Sbjct: 642 SKWYLHNIDHLYVVGQTFPSVEVPGPHSRKVTNASKNRIKMMSYRMM----RRSPHSVVN 697
Query: 827 VDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVC 886
+ +++ ++A R+KLKE FL K W +K + E +R + PE VC
Sbjct: 698 LADITKHIAESTDAQNRQKLKE--FLVYAKMDKGQWKLKPGETLMDEAGIRAMVKPEDVC 755
Query: 887 SYESMQAGLYRLKHLGI----TQLTLPASISSAMSQLPDEAIALAAASHIEREL--QITP 940
+ MQ G+ L+ G L AA E +L ++ P
Sbjct: 756 LIDGMQLGMQILEDAGFDPNNVNLDEDNDDVEDEDDDRTAKGGKKAADKNEDKLADKMAP 815
Query: 941 WNLSSNFV-ACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAAN 999
W S F+ AC + L++ G GDP+G GLGFS++R + K + K
Sbjct: 816 WKTSKAFIDACAGK-----AMLKLHGEGDPTGHGLGFSFIRTSMKGGYIETVQK------ 864
Query: 1000 RGGSTVTGTDADLRRLSMEAAREVLLK------FNVPEEMIAKQTRWHRI 1043
GGS T DA M A + + K +NV E+ + + H I
Sbjct: 865 -GGSHTTAADA------MAAHPDAMRKAYNGHAYNVKEQEVMYKKGIHEI 907
>gi|310789971|gb|EFQ25504.1| transcription initiation factor TFIID subunit 1 [Glomerella
graminicola M1.001]
Length = 1180
Score = 158 bits (399), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 133/461 (28%), Positives = 197/461 (42%), Gaps = 82/461 (17%)
Query: 653 AFKKKSDLSVKDGHV-FLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNN 711
FK DL + D L EYCE P +LSN GMG + YY+K D+
Sbjct: 507 VFKTTKDLGITDNSTAVLFEYCERTPPVLSNFGMGNRVINYYRKKKVDDEETPPKMD--- 563
Query: 712 CLGNVLTLEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKG-- 767
+G L P D+SPF G+++ G + +L MYRAP+F HK +TDFL +RS+ G
Sbjct: 564 -IGESHVLLPEDRSPFAIFGEVEVGQTMPTLHNQMYRAPIFKHKPRSTDFLCIRSSTGVN 622
Query: 768 --KISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCI 825
+ +ID + VV Q P +EV P S+ + S NR+ + YR +R +
Sbjct: 623 GSNWYLHKIDHLYVVGQTFPSVEVPGPHSRKVTNASKNRIKMISYR----MMRRNEHNLV 678
Query: 826 GVDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHV 885
+ E++ ++A R+KLKE FL K +W ++ + E +R + PE V
Sbjct: 679 NLSEVTKHIAESTDAQNRQKLKE--FLVYAKVEKGLWGLRPNEQLMDENSIRAMIKPEDV 736
Query: 886 CSYESMQAGLYRLKHLGI----TQLTLPASISSAMSQLPDEAIALA-----AASHIEREL 936
C + MQ G+ L+ G L + A AA E +L
Sbjct: 737 CLIDGMQLGMQMLEDAGFDPNNVNLDEENEEPAEEDDDERTGAGTAKGSKKAAEKNEEKL 796
Query: 937 --QITPWNLSSNFV-ACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVK 993
++ PW S F+ AC + L++ G GDP+G GLGFS++R + K + K
Sbjct: 797 ADKMAPWKTSKAFIDACAGK-----AMLKLHGQGDPTGHGLGFSFIRTSMKGGYIETVQK 851
Query: 994 KKAAANRGGSTVTGTDA-----DLRRLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRK 1048
GGS T DA D +R+ A +NV E+
Sbjct: 852 -------GGSHTTAADAMAAHPDTQRMKNGHA------YNVKEQ---------------- 882
Query: 1049 LSSEQAASGVQLQQQTRGKCQEIWDRQVQSL--SAADDDEI 1087
+Q R +EIW++Q SL S DD++
Sbjct: 883 ------------EQMYRKGIREIWEKQKSSLEDSTEKDDDL 911
>gi|392570777|gb|EIW63949.1| atypical/TAF1 protein kinase [Trametes versicolor FP-101664 SS1]
Length = 1068
Score = 157 bits (398), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 151/606 (24%), Positives = 252/606 (41%), Gaps = 122/606 (20%)
Query: 528 NRDMMEGSWLDNIIWEP-----------------------VDAVGKPK--LILDLQDEQM 562
N+ + EGSW +IIW P V V +P+ + D Q
Sbjct: 260 NKALEEGSWTQSIIWGPREPFRDFTQLELHEQEAAEERPAVQDVARPRKRMRTDTQPRDK 319
Query: 563 L------FEILDNKDDEHPLLHAGAMIITRSAKPSDFKPAESVKLFYLGKELEDHKSLAD 616
F + H + ++ A P A+ ++L + L ++ +
Sbjct: 320 FNISNDQFYEVSKDGGRHRVRQTFGQLVVEHAYP-----AQKLQLPFYKTRLSKQEARSF 374
Query: 617 QNVR---PNSL-IHL--IRTKIHLLPRAQKLPGENKSLRPPGAFKKKSDLSVKDGHVFLM 670
P+++ IH +RT RA + G+ + + DLS++D F++
Sbjct: 375 HRTALQFPSNIEIHFSKVRTAKKKKDRAGRKVGKGGDIG--EGLHRTGDLSLRDTSNFVL 432
Query: 671 -EYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLTLEPGDKSPFL- 728
E+ EE P ++SN GMG+ L YY+K + D + LG + +EP D+SPF+
Sbjct: 433 WEFSEEHPPIISNFGMGSILVNYYRKKNEKDD-----HVPKSDLGEPIVIEPQDESPFMK 487
Query: 729 -GDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSA-KG--KISIRRIDKVAVVAQQE 784
G + G + +L N+ RAP+F HK TDFL++R+ KG K IR I + V Q
Sbjct: 488 FGYVYPGQTVPALYNNLMRAPLFRHKSYPTDFLVIRTTVKGESKYYIREIGNLFAVGQTY 547
Query: 785 PLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLSEAIIRK 844
P+ EV P S+ + R+ + ++ ++++ L + L FP+ +E +R+
Sbjct: 548 PVTEVPGPHSRKITNTIKLRLQIIAFKLLEKSSEKRL----KISRLMKYFPDQNELQMRQ 603
Query: 845 KLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRLKHLGIT 904
+LKE R G + W +K + IPS+ D+ K+ PE V ESMQ G L+ G +
Sbjct: 604 RLKEFMEYHRRGPHQGFWRLKGNWTIPSDADMLKMVTPEQVVLSESMQVGQRHLQDSGYS 663
Query: 905 QLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENIERLEIT 964
+ +A ++ E Q+ PW + NF+ T L++
Sbjct: 664 F---------------NGEVAEEDEGNLSIEQQLAPWITTKNFLFATQAK----AMLKLH 704
Query: 965 GVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLRRLSMEAAREVL 1024
G GDP+GRG FS++R S+ VK G D + + E+ +
Sbjct: 705 GEGDPTGRGEAFSFIR----VSMKDIFVK------------AGEDYEQKLAEAESRPKSA 748
Query: 1025 LKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASGVQLQQQTRGKCQEIWDRQVQSLSAADD 1084
++NV E+ QQ + + + IW Q SLS D+
Sbjct: 749 HRYNVAEQ----------------------------QQIYKSEIERIWKAQFDSLSRKDE 780
Query: 1085 DEIGSD 1090
E+ ++
Sbjct: 781 PELTAE 786
>gi|255711822|ref|XP_002552194.1| KLTH0B09372p [Lachancea thermotolerans]
gi|238933572|emb|CAR21756.1| KLTH0B09372p [Lachancea thermotolerans CBS 6340]
Length = 1002
Score = 157 bits (398), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 122/398 (30%), Positives = 192/398 (48%), Gaps = 59/398 (14%)
Query: 654 FKKKSDLSVKD-GHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNC 712
F + DL++ D +FLMEY EE P+ LS GMG L YY+K+ D + L G
Sbjct: 460 FARSPDLTLGDSAPIFLMEYSEESPVALSKFGMGNKLINYYRKTDEKDLSRPKLPVGET- 518
Query: 713 LGNVLTLEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKG--- 767
+VL ++ DKSPF G ++ G +L NM RAPVF H+V+ TDFLL++S
Sbjct: 519 --HVLGVQ--DKSPFWNFGFVEPGNVVPTLYNNMIRAPVFKHEVSGTDFLLIKSTGNGMG 574
Query: 768 -KISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIG 826
+ +R I+ + V Q P++EV P S+ + + NR+ + VYR + +A+ LL
Sbjct: 575 NRFYLRNINHLFTVGQTFPVVEVPGPNSRRVTSMGKNRLRMIVYRILNKSAEHRLL---- 630
Query: 827 VDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVC 886
V +++ FP+ ++ R++LKE +RDG+ W +K + +P +++K+ PE V
Sbjct: 631 VKQVARHFPDQNDMQNRQRLKEFMKYQRDGDDHGFWKLKESEILPDNENVKKMITPEDVS 690
Query: 887 SYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSN 946
ESM G Q + +L I+ E + PW + N
Sbjct: 691 LTESMYQG---------QQFQEDNEFFNCDEKL------------IKLEENLIPWAATKN 729
Query: 947 FVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVT 1006
F+ T Q R ++ I G GDP+G G GFS+++ + K GG T +
Sbjct: 730 FLNAT-QMRAMVQ---IHGAGDPTGCGEGFSFLKTSMK----------------GGFTRS 769
Query: 1007 GTDADLRRLSMEAAREVLLKFNVPEEMIAKQTRWHRIA 1044
G D+ ++S + V + EE I+K W+ A
Sbjct: 770 GDDSGQPQISGGHSYNVAQQQKAYEEEISKT--WYTQA 805
>gi|255085324|ref|XP_002505093.1| histone acetyltransferase [Micromonas sp. RCC299]
gi|226520362|gb|ACO66351.1| histone acetyltransferase [Micromonas sp. RCC299]
Length = 1946
Score = 157 bits (397), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 134/442 (30%), Positives = 209/442 (47%), Gaps = 60/442 (13%)
Query: 653 AFKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNC 712
A K SDLS +G + L++Y E+ P L++ GMGA TYY++ + GD AG L G
Sbjct: 981 AMTKPSDLSATNGKLILVQYAEKDPPLIAKPGMGAKRVTYYRRRTQGDTAGRSLTQGGQR 1040
Query: 713 LGNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTD--FLLVRSAKGKIS 770
+V+ L P SPF+ D+ G Q SLET MYRAP+F + + +LL+RS G ++
Sbjct: 1041 --HVIDLRPEAASPFISDLSPGQPQESLETTMYRAPMFRRVIGKDEAIYLLIRSPHGAMT 1098
Query: 771 IRRIDKVAVVAQQEPLMEVMSPGSKNLQTY---SINRMLVNVYREFSAAAKRGLLPCIGV 827
+R + + + QQEP +EV P + L+ + ++N +++ + + V
Sbjct: 1099 MREVTEYFMCGQQEPHIEVFQPNTDRLRDFEERAVNSAVIHTLLKQRDEKVPEEDMRVKV 1158
Query: 828 DELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKR---------TFHI-PS---EG 874
++ QF + AI+ +K R + + +R F + P E
Sbjct: 1159 SDIEKQF---NRAIVGNDIKRRIRRRVVQPVRPPGTRRRADEWDDDADEFELNPGYRFED 1215
Query: 875 DL--RKLAYPEHVCSYESMQAGLYRLK----HLGITQLTLPASISSAMSQLPDE-AIALA 927
DL ++ E VC+Y+SM+A +L+ GI ++ I ++M+Q+ + +
Sbjct: 1216 DLMVHRMCPVEEVCAYDSMRAAKAKLEAGRDRDGIARIR--KLIGTSMTQMQNAFQSVMR 1273
Query: 928 AASHIERE--------LQITPWNLSSNFVACTNQDRENIERLEITGVGDPSGR-----GL 974
+ +R+ LQ+ PWN + F+A + L +PS R G
Sbjct: 1274 GTTPAQRKGLLDLELMLQLQPWNQTVEFLAAVGG--RAVLHL------NPSRRLREKTGK 1325
Query: 975 GFSYV-RAAPKASVSSAMVKKKAAANRGGSTVTGTDADLRRLSMEAAREVLLKFNVPEEM 1033
+ YV R PK SA K K TVTGTDADLR+L+M + +L F VPE
Sbjct: 1326 FYHYVRRQPPKEDQVSAQPKVKPG------TVTGTDADLRKLTMPQSERILKGFGVPEST 1379
Query: 1034 IAKQTRWHRIAMIRKLSSEQAA 1055
I RW RI +IR+LS A
Sbjct: 1380 IKSLHRWKRIGLIRELSGAATA 1401
>gi|429847673|gb|ELA23252.1| transcription initiation factor tfiid subunit 1 [Colletotrichum
gloeosporioides Nara gc5]
Length = 1237
Score = 157 bits (396), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 117/373 (31%), Positives = 173/373 (46%), Gaps = 37/373 (9%)
Query: 653 AFKKKSDLSVKDGHV-FLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNN 711
F+ DL + D L EYCE P +LSN GMG + YY+K D+
Sbjct: 512 VFRTTKDLGITDNSTAVLFEYCERTPPVLSNFGMGNRVINYYRKKKVDDEEAPPKME--- 568
Query: 712 CLGNVLTLEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKG-- 767
+G L P D+SPF G+++ G + +L MYRAP+F HK +TDFL VRS+ G
Sbjct: 569 -IGESHILLPEDRSPFAIFGEVEVGQTMPTLHNQMYRAPIFKHKPRSTDFLCVRSSTGVD 627
Query: 768 --KISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCI 825
+ +ID + VV Q P +EV P S+ + S NR+ + YR +R +
Sbjct: 628 GSSWYLHKIDHLYVVGQTFPSVEVPGPHSRKVTNASKNRIKMISYR----MMRRNEHSLV 683
Query: 826 GVDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHV 885
+ E++ + ++A R+KLKE FL K +W ++ + E +R + PE V
Sbjct: 684 NLSEVTKHIADSTDAQNRQKLKE--FLVYAKVEKGLWGLRPGETLMDENGIRAMIRPEDV 741
Query: 886 CSYESMQAGLYRLKHLGI--TQLTLPASISSAMSQLPDEAIALA---AASHIEREL--QI 938
C + MQ G+ L+ G + L + DE AA E +L ++
Sbjct: 742 CLIDGMQLGMQMLEDAGFDPNNVNLEDDNDEPAEEDDDERTGKGGKKAAEKNEEKLADKM 801
Query: 939 TPWNLSSNFV-ACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAA 997
PW S F+ AC + L++ G GDP+G GLGFS++R + K + K
Sbjct: 802 APWKTSKAFIDACAGK-----AMLKLHGQGDPTGHGLGFSFIRTSMKGGYLETVQK---- 852
Query: 998 ANRGGSTVTGTDA 1010
GGS T DA
Sbjct: 853 ---GGSHTTAADA 862
>gi|302924608|ref|XP_003053927.1| transcription initiation factor TFIID, subunit TAF1 [Nectria
haematococca mpVI 77-13-4]
gi|256734868|gb|EEU48214.1| transcription initiation factor TFIID, subunit TAF1 [Nectria
haematococca mpVI 77-13-4]
Length = 1114
Score = 157 bits (396), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 118/384 (30%), Positives = 172/384 (44%), Gaps = 60/384 (15%)
Query: 654 FKKKSDLSVKDGHV-FLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNC 712
F K DLS+ D V L EYCE+RP +LSN GMG L YY++ D
Sbjct: 507 FLKSKDLSINDNSVAVLYEYCEQRPRVLSNFGMGNRLINYYRRKDNNDDDQL----PKQE 562
Query: 713 LGNVLTLEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKG--- 767
LG L P D+SPF G + AG + +L MYRAPVF H DFL+VRS G
Sbjct: 563 LGEYRMLLPEDRSPFSLFGTVDAGETVPTLHNEMYRAPVFKHNPRGNDFLVVRSTTGEHG 622
Query: 768 -KISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIG 826
K + +ID + VV QQ P +EV P S+ + S NRM + +R +
Sbjct: 623 SKWFLHKIDHLYVVGQQFPSVEVPGPHSRKVTNASKNRMKMLAFRMIRHS---------- 672
Query: 827 VDELSVQFPNLSEAII-------RKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKL 879
D + Q ++++ I R+KLKE R+ K +W +K +P E +R +
Sbjct: 673 -DTDNCQLSDITKHIAESTDTQNRQKLKEFLQYDRESGEKGMWRLKPGEILPDESAIRSM 731
Query: 880 AYPEHVCSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEA---------IALAAAS 930
PE VC ++MQ G+ L+ G M + +A
Sbjct: 732 IKPEEVCLLDAMQLGIKELEDAGYDPRNANIEDDVQMQDADGDDEDADEEGSRVAKGTKK 791
Query: 931 HIERELQ-----ITPWNLSSNFV-ACTNQDRENIERLEITGVGDPSGRGLGFSYVRAA-- 982
E++ + + PW + F+ AC + L++ G GDP+G GLGFS++R +
Sbjct: 792 QPEKQEETLADKMAPWKTTKAFIDACAQK-----AMLQLHGEGDPTGHGLGFSFIRTSMK 846
Query: 983 ---------PKASVSSAMVKKKAA 997
P A+ + AM ++K A
Sbjct: 847 GGYIEAVQGPLATSADAMEREKRA 870
>gi|295673418|ref|XP_002797255.1| transcription initiation factor TFIID subunit 1 [Paracoccidioides
sp. 'lutzii' Pb01]
gi|226282627|gb|EEH38193.1| transcription initiation factor TFIID subunit 1 [Paracoccidioides
sp. 'lutzii' Pb01]
Length = 1092
Score = 157 bits (396), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 106/339 (31%), Positives = 159/339 (46%), Gaps = 37/339 (10%)
Query: 654 FKKKSDLSVKDG-HVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNC 712
+ LS+ D HV L+EY EE P ++SN GMG+ YY++ + D A
Sbjct: 537 YSSTKSLSLADNSHVLLLEYSEEHPTMMSNFGMGSRFINYYRRKNMEDPA-----RPKAE 591
Query: 713 LGNVLTLEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKG--- 767
+G L P DKSPF G I G + +++ T M+RAPVF + TDFL++R++ G
Sbjct: 592 IGETAVLLPQDKSPFSIFGHIDPGETTATIATGMFRAPVFQQEAKPTDFLVIRNSTGIDG 651
Query: 768 -KISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIG 826
IR I+ + V Q P ++V P S+ + T S NR+ + YR I
Sbjct: 652 SSYYIRNIEYIYVAGQAFPSVDVPGPHSRKVTTASKNRLKMICYRLLRKNKNH----RIS 707
Query: 827 VDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVC 886
V +++ FP S+ R+K+KE FL+ + K+ W M+ IP E LR PE +C
Sbjct: 708 VADITEHFPESSDMQNRQKMKE--FLQFSKDHKE-WEMRPGEPIPDEDVLRSYVKPEDIC 764
Query: 887 SYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSN 946
E+MQ G L G + E Q+ PW + +
Sbjct: 765 LLEAMQVGQQHLHDAGYDNDE--------------DDADDDEKEGESLEQQLAPWKTTKH 810
Query: 947 FVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKA 985
F++ T + L+I G GDP+GRG GFS+++ + K
Sbjct: 811 FLSAT----QGKAMLQIHGEGDPTGRGEGFSFIKTSMKG 845
>gi|365984879|ref|XP_003669272.1| hypothetical protein NDAI_0C03690 [Naumovozyma dairenensis CBS 421]
gi|343768040|emb|CCD24029.1| hypothetical protein NDAI_0C03690 [Naumovozyma dairenensis CBS 421]
Length = 1122
Score = 157 bits (396), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 123/399 (30%), Positives = 183/399 (45%), Gaps = 58/399 (14%)
Query: 595 PAESVKLFYLGKELEDHKSLADQNVRPNSLIHLIRTKIHLLPRAQKLPGENKSLRPPGAF 654
P V+ F H+ N+RP + I + KI R + K ++ +F
Sbjct: 560 PKSQVRYF--------HRPHFGNNIRPGTNIVFSKLKIRKRKRDK-----GKDIKE--SF 604
Query: 655 KKKSDLSVKD-GHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCL 713
DL++ D ++LMEY E+ PL LS GM L YY+K+S D L G
Sbjct: 605 ASTQDLTIGDTAPIYLMEYSEQTPLALSKFGMANKLINYYRKTSDQDTLRPKLPVGET-- 662
Query: 714 GNVLTLEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKIS- 770
+VL ++ DKSPF G ++ G +L NM RAPVF H V+ TDFLLVRS+ +S
Sbjct: 663 -HVLGVQ--DKSPFWNFGFVEPGHIVPTLYNNMIRAPVFKHDVSGTDFLLVRSSGHGVSN 719
Query: 771 ---IRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGV 827
IR I+ + V Q P+ E+ P S+ + + R+ + VYR + A R I +
Sbjct: 720 RFYIRGINHLFAVGQTFPVEEIPGPNSRKVTSMKTTRLRMIVYRLLNKAQGR----SISI 775
Query: 828 DELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCS 887
D ++ FP+ R+K+KE +RDG K +W +K + RKL PE V
Sbjct: 776 DPVNKHFPDQDYGQNRQKVKEFMKYQRDGPDKGLWKLKEGETLLDNEHTRKLITPEQVSE 835
Query: 888 YESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIER-ELQITPWNLSSN 946
E+ G+ Q ++ ++R E + PWN + N
Sbjct: 836 VETTSQGI----------------------QFQEDNEWFNFDDKLKRLEENLLPWNATKN 873
Query: 947 FVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKA 985
F+ T Q R I +I G GDP+G G GFS+++ + K
Sbjct: 874 FINAT-QMRAMI---QIHGAGDPTGVGEGFSFLKTSMKG 908
>gi|290976354|ref|XP_002670905.1| predicted protein [Naegleria gruberi]
gi|284084469|gb|EFC38161.1| predicted protein [Naegleria gruberi]
Length = 1241
Score = 156 bits (395), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 107/317 (33%), Positives = 157/317 (49%), Gaps = 18/317 (5%)
Query: 656 KKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGN 715
KK DLS D V LMEY EERP LL+N GMG + YY+K + S C
Sbjct: 543 KKQDLSANDHRVILMEYVEERPSLLNNVGMGTMIMNYYKK------PNSAFDSVPECEDG 596
Query: 716 V-LTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLL-VRSAKG---KIS 770
+ + +E D P + + G ++ E NM+RA +F +V +TDFLL R A G K
Sbjct: 597 IPIVVESEDGVPLINTLVDGEFFTTTENNMFRAQIFKQEVKSTDFLLCTRKASGGKTKFY 656
Query: 771 IRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREF-SAAAKRGLLPCIGVDE 829
IR I + VV +P +EV P ++ ++Y+ NR+ + +YR F K I +D+
Sbjct: 657 IREIPREYVVGHTQPQVEVTPPRTRASESYTNNRLTLFIYRSFLDQMKKGKKQLKIKIDD 716
Query: 830 LSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYE 889
+ FP+ IR++LK A R G VW+ + IPSE +L+ L PE VC E
Sbjct: 717 IKEAFPDFPHQTIRERLKALATYDR---GSGVWTAHPSKPIPSEEELQNLVSPEMVCINE 773
Query: 890 SMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVA 949
SM +G RL GI + + +++ E IERE PW+ ++NF
Sbjct: 774 SMLSGDLRLNDKGIDDEASMVAFELSFARV--EEKYRDTIRFIEREKIELPWDKTNNFHL 831
Query: 950 CTNQDRENIERLEITGV 966
C +E + +L++ GV
Sbjct: 832 CFKGGKEGV-KLQLLGV 847
Score = 40.0 bits (92), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 4/41 (9%)
Query: 528 NRDMMEGSWLDNIIWEPVDAVGK----PKLILDLQDEQMLF 564
N +M G W+D+I W+ DA K KLI+D+ D+ M F
Sbjct: 392 NEQLMNGDWMDDIYWDEYDASKKQAKNTKLIIDMNDKSMFF 432
>gi|396483228|ref|XP_003841656.1| hypothetical protein LEMA_P095860.1 [Leptosphaeria maculans JN3]
gi|312218231|emb|CBX98177.1| hypothetical protein LEMA_P095860.1 [Leptosphaeria maculans JN3]
Length = 1206
Score = 156 bits (395), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 113/349 (32%), Positives = 168/349 (48%), Gaps = 34/349 (9%)
Query: 646 KSLRPPGAFKKKSDLSVKDGH-VFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGA 704
K+L+P AF DL++ D + L EY EE P LSN GMG + YY++ D A
Sbjct: 613 KNLKPSEAFATAEDLNIGDNSDLLLAEYSEEYPTTLSNFGMGIKILNYYRRKDMDDTA-- 670
Query: 705 LLCSGNNCLGNVLTLEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLV 762
++ +G L P DKSPF G ++ G +L MYRAPVF HK A TDFL+
Sbjct: 671 -RPKPDDGIGETSVLLPQDKSPFSLFGQVEPGQQVLTLHNAMYRAPVFKHKPAETDFLVS 729
Query: 763 RSAKG----KISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAK 818
RS+ G K +R I + VV QQ P +EV ++ + S R+ + +R + +
Sbjct: 730 RSSTGVHGPKYYMRTIPNLMVVGQQFPSVEVPGTHARKVTEASKKRLKMLAFRLYRRGQQ 789
Query: 819 RGLL-PCIGVDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLR 877
RG P + + + P A R +++E ++D W IP E LR
Sbjct: 790 RGARQPWVSNEMIKQHLPGTEIAQNRSRMREIMKYQKDIG---TWEPVPGETIPEEPVLR 846
Query: 878 KLAYPEHVCSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQ 937
PE VC +SM AG +L+ GI S+ + +E A +++
Sbjct: 847 TWIKPEDVCLIDSMHAGDKQLQDAGIK--------SNEIRDDDEEQDNENA------DVK 892
Query: 938 ITPWNLSSNFV-ACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKA 985
+ PWN + NF+ AC + LE+ G GDP+G+GLGFS+++ + K
Sbjct: 893 LAPWNTTKNFLNACAGK-----AMLELHGEGDPTGQGLGFSFIKVSMKG 936
>gi|296415787|ref|XP_002837567.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633440|emb|CAZ81758.1| unnamed protein product [Tuber melanosporum]
Length = 1084
Score = 156 bits (394), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 109/340 (32%), Positives = 167/340 (49%), Gaps = 39/340 (11%)
Query: 653 AFKKKSDLSVKDGHVF-LMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNN 711
K DLS+ DG F L+EY EE P ++SN GMG+ L YY++ P D+ S
Sbjct: 501 VLKITKDLSLMDGCNFILLEYSEEYPFVMSNFGMGSRLINYYRRKGPDDE------SRPK 554
Query: 712 C-LGNVLTLEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGK 768
C +G L D+SPF G + G + +L NM RAP+F TDFL++R+ +
Sbjct: 555 CEIGETQVLMSQDRSPFWNFGTVDPGETVPTLYNNMVRAPIFKQNPKPTDFLVIRNTQAN 614
Query: 769 IS---IRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCI 825
S +R I + VV Q P+ +V P S+ + T + NR+ + YR KR I
Sbjct: 615 QSHYYLRNIPNLFVVGQLLPVTDVPGPHSRKVTTAAKNRLKMVCYR----VVKRKPEKAI 670
Query: 826 GVDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHV 885
+ +++ FP +E +R+K+KE + K VW M +P E +R + PE +
Sbjct: 671 ILKDIAEHFPENNE--MRQKMKEFMSYNKP---KGVWEMNAGEVVPDESVIRTMVKPEDL 725
Query: 886 CSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSS 945
C E+MQ G+ L G ++ ++ + E ++L E Q+TPW +
Sbjct: 726 CLLEAMQVGVRHLADSGYSK-----TVDDEVDDDDKEGMSL--------EQQLTPWVSTK 772
Query: 946 NFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKA 985
NF+ T+ L++ G GDPSGRG FS+V+ + K
Sbjct: 773 NFINATS----GKAMLQLHGEGDPSGRGEAFSFVKTSMKG 808
>gi|226292213|gb|EEH47633.1| transcription initiation factor TFIID subunit 1 [Paracoccidioides
brasiliensis Pb18]
Length = 1092
Score = 155 bits (393), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 105/339 (30%), Positives = 161/339 (47%), Gaps = 37/339 (10%)
Query: 654 FKKKSDLSVKDG-HVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNC 712
+ LS+ D HV L+EY EE P ++SN GMG+ YY++ + D A
Sbjct: 537 YSSTKSLSLADNSHVLLLEYSEEHPTMMSNFGMGSRFINYYRRKNMEDPA-----RPKAE 591
Query: 713 LGNVLTLEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKG--- 767
+G L P DKSPF G I G + +++ T M+RAPVF + TDFL++R++ G
Sbjct: 592 IGETAVLLPQDKSPFSIFGHIDPGETTATIATGMFRAPVFQQEAKPTDFLVIRNSTGIDG 651
Query: 768 -KISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIG 826
IR I+ + V Q P ++V P S+ + T + NR+ + YR ++ I
Sbjct: 652 SSYYIRNIEYIYVAGQAFPSVDVPGPHSRKVTTAAKNRLKMICYRLL----RKNKNHRIS 707
Query: 827 VDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVC 886
V +++ FP S+ R+K+KE FL+ + K+ W M+ IP E LR PE +C
Sbjct: 708 VADITEHFPESSDMQNRQKMKE--FLQFSKDHKE-WEMRPGEPIPDEDVLRSYVKPEDIC 764
Query: 887 SYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSN 946
E+MQ G L G + E Q+ PW + +
Sbjct: 765 LLEAMQVGQQHLHDAGYDNDE--------------DDADDDEKEGESLEQQLAPWKTTKH 810
Query: 947 FVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKA 985
F++ T + L+I G GDP+GRG GFS+++ + K
Sbjct: 811 FLSAT----QGKAMLQIHGEGDPTGRGEGFSFIKTSMKG 845
>gi|254581524|ref|XP_002496747.1| ZYRO0D07216p [Zygosaccharomyces rouxii]
gi|238939639|emb|CAR27814.1| ZYRO0D07216p [Zygosaccharomyces rouxii]
Length = 1003
Score = 155 bits (392), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 118/360 (32%), Positives = 169/360 (46%), Gaps = 44/360 (12%)
Query: 653 AFKKKSDLSVKD-GHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNN 711
+F DL+V D VFLMEY EE P+ LS GM L YY+K + D + L G
Sbjct: 464 SFSSTQDLTVGDTAPVFLMEYSEEAPIALSKFGMANKLINYYRKMNEHDTSRPKLPVGET 523
Query: 712 CLGNVLTLEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSA---- 765
+VL ++ DKSPF G ++ G +L NM RAPVF H V+ TDFLLVRS+
Sbjct: 524 ---HVLGVQ--DKSPFWNFGFVEPGHIVPTLYNNMIRAPVFKHDVSGTDFLLVRSSGNGT 578
Query: 766 KGKISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCI 825
+ +R I+ + V Q P E+ P S+ + + R+ + VYR + R I
Sbjct: 579 SNRFYLRTINHLFAVGQTFPCEEIPGPNSRRVTSMRTTRLRMVVYRILNRTPSR----AI 634
Query: 826 GVDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHV 885
++ ++ FP+ R+K+KE +R+G+ K +W +K + +KL PE V
Sbjct: 635 SIEPIARHFPDQDYGQNRQKIKEFMKYQREGSDKGLWKLKDGEPLLDNESAKKLILPEQV 694
Query: 886 CSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIER-ELQITPWNLS 944
ESM GL Q D+ + + + E + PWN +
Sbjct: 695 SEVESMNQGL----------------------QFQDDTESYNFDEKLAKLEENLLPWNAT 732
Query: 945 SNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKAS-VSSAMVKKKAAANRGGS 1003
NFV T Q R I+ I G GDP+G G GFS+++ + K V S M K A G S
Sbjct: 733 KNFVNAT-QMRAMIQ---IHGAGDPTGCGEGFSFLKTSMKGGFVKSGMDNGKPQAPGGHS 788
>gi|430812520|emb|CCJ30057.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 2021
Score = 155 bits (392), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 102/327 (31%), Positives = 163/327 (49%), Gaps = 35/327 (10%)
Query: 669 LMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSG-NNCLGNVLTLEPGDKSPF 727
LMEY EE P ++SN GMG+ + +Y+K S D C+ +G LEP D+SPF
Sbjct: 418 LMEYSEEYPSVISNPGMGSRVVVFYRKKSDDD------CTRPKMTIGETHILEPQDRSPF 471
Query: 728 --LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVR---SAKGKISIRRIDKVAVVAQ 782
G + G + +L M RAP+F H+ TDFL++R S + +R I + V+ Q
Sbjct: 472 WNFGTVDPGETVLTLYNKMIRAPIFAHEPENTDFLVLRNTCSQGSRYYLRNIKYLYVIGQ 531
Query: 783 QEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLSEAII 842
P+++V P S+ + S NR+ + +R +L + +++ FP+ +E +
Sbjct: 532 TLPVIDVPGPHSRKITMISKNRLKMICFRLLRREESGKIL----IKQMAHHFPDQNEMQL 587
Query: 843 RKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRLKHLG 902
R++LKE +R G+ + W +K + +P E +R + PE VC ESMQ GL L+ G
Sbjct: 588 RQRLKEFMDFQRKGDDQGYWRLKSSEVLPPEVVIRSMVSPETVCLIESMQVGLQNLEDAG 647
Query: 903 ITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENIERLE 962
+ + DE + S + Q+ PW L+ NF+ T + L+
Sbjct: 648 YGR------------AVEDENMDETCLS---IDQQLVPWILTRNFINAT----QGKAMLK 688
Query: 963 ITGVGDPSGRGLGFSYVRAAPKASVSS 989
+ G GDP+G G GFS++R + K S
Sbjct: 689 LHGEGDPTGCGQGFSFIRTSMKGGFKS 715
>gi|225681086|gb|EEH19370.1| trimethylguanosine synthase [Paracoccidioides brasiliensis Pb03]
Length = 1419
Score = 155 bits (392), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 105/339 (30%), Positives = 159/339 (46%), Gaps = 37/339 (10%)
Query: 654 FKKKSDLSVKDG-HVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNC 712
+ LS+ D HV L+EY EE P ++SN GMG+ YY++ + D A
Sbjct: 845 YSSTKSLSLADNSHVLLLEYSEEHPTMMSNFGMGSRFINYYRRKNMEDPA-----RPKAE 899
Query: 713 LGNVLTLEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKG--- 767
+G L P DKSPF G I G + +++ T M+RAPVF + TDFL++R++ G
Sbjct: 900 IGETAVLLPQDKSPFSIFGHIDPGETTATIATGMFRAPVFQQEAKPTDFLVIRNSTGIDG 959
Query: 768 -KISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIG 826
IR I+ + V Q P ++V P S+ + T + NR+ + YR I
Sbjct: 960 SSYYIRNIEYIYVAGQAFPSVDVPGPHSRKVTTAAKNRLKMICYRLLRKNKNH----RIS 1015
Query: 827 VDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVC 886
V +++ FP S+ R+K+KE FL+ + K+ W M+ IP E LR PE +C
Sbjct: 1016 VADITEHFPESSDMQNRQKMKE--FLQFSKDHKE-WEMRSGEPIPDEDVLRSYVKPEDIC 1072
Query: 887 SYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSN 946
E+MQ G L G + E Q+ PW + +
Sbjct: 1073 LLEAMQVGQQHLHDAGYDNDE--------------DDADDDEKEGESLEQQLAPWKTTKH 1118
Query: 947 FVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKA 985
F++ T + L+I G GDP+GRG GFS+++ + K
Sbjct: 1119 FLSAT----QGKAMLQIHGEGDPTGRGEGFSFIKTSMKG 1153
>gi|353236564|emb|CCA68556.1| related to TAF1-TFIID subunit (TBP-associated factor), 145 kD
[Piriformospora indica DSM 11827]
Length = 1059
Score = 155 bits (391), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 109/345 (31%), Positives = 167/345 (48%), Gaps = 35/345 (10%)
Query: 653 AFKKKSDLSVKDGHVFLM-EYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNN 711
+K DL++KD F++ EY EE P +SN GMG+ L YY+K D+
Sbjct: 402 GLRKTGDLTLKDTSKFVLWEYSEEHPPTISNFGMGSMLVNYYRKKDEKDE-----HIPKR 456
Query: 712 CLGNVLTLEPGDKSPFL--GDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRS---AK 766
G L+P D +PFL G + G + +L NM RAP+F HK + TDFL+VRS +
Sbjct: 457 EFGTPFVLQPSDDTPFLKLGSVAPGQTVPALYNNMIRAPIFEHKASPTDFLVVRSTVAGE 516
Query: 767 GKISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIG 826
K IR I + V+ Q P+ E+ P S+ + T + +R+ YR +R I
Sbjct: 517 SKYYIREIKHLFVLGQTIPVTEIPGPHSRKITTTAKSRLQQICYRLL----RRSEEERIR 572
Query: 827 VDELSVQFPNLSEAIIRKKLK----ECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYP 882
+ +L FP+ E ++++LK E +R G + W +K IP E + K+ P
Sbjct: 573 IMQLPKYFPDQDETQLKQRLKAHLQEFMEYQRKGPHQGFWRLKPNLTIPDESTIVKMVKP 632
Query: 883 EHVCSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAA---SHIERELQIT 939
E V ESMQ G +L L A S+ ++ DE + A + + Q+
Sbjct: 633 EDVVLTESMQVGQQQL---------LDAGYSADTNEADDEQATIVKAKDGTPLTITQQLA 683
Query: 940 PWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPK 984
PW + N + Q ++ L++ G GDP+GRG FSY++ + K
Sbjct: 684 PWMTTKNVL----QAAQHKAMLKLYGEGDPTGRGEAFSYLKVSMK 724
>gi|300708199|ref|XP_002996284.1| hypothetical protein NCER_100651 [Nosema ceranae BRL01]
gi|239605572|gb|EEQ82613.1| hypothetical protein NCER_100651 [Nosema ceranae BRL01]
Length = 874
Score = 155 bits (391), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 113/330 (34%), Positives = 162/330 (49%), Gaps = 41/330 (12%)
Query: 655 KKKSDLSVKDGHVF-LMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCL 713
KK S+L++KD F L EY EE P + N GM + + TYY+K+S D
Sbjct: 301 KKISELTLKDNSDFVLFEYSEEFPPFVVNCGMVSLINTYYRKTSLRDDYET-------DA 353
Query: 714 GNVLTLEPGDKSPFL--GDIKAGCSQSSLETNMYRAPVFTHKVATTDFL-LVRSAKG--K 768
N++ L+P D SPF GD+K G + SL N++ AP+F+H+ DFL ++ + G K
Sbjct: 354 PNLVILDPEDPSPFFSFGDVKQGTTLQSLTNNLFTAPIFSHQ--NDDFLCILETVDGISK 411
Query: 769 ISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVD 828
I R I + V Q+ P+ E+ +P S+ L + NR+ V YR F+ K G +
Sbjct: 412 IYPRPISSIFCVGQEFPVDEIYAPHSRKLNIFCKNRLKVAAYRLFTCKDK-GFRE-FKMS 469
Query: 829 ELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSY 888
+L FP SE RK LKE A + G + +W +K T + +E DLRKL PE++C Y
Sbjct: 470 QLDQLFPYFSEGSKRKWLKEYADCVKKGK-ENIWILKPTSSVLTEEDLRKLITPENICQY 528
Query: 889 ESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFV 948
ESM A RL+ G + + + L I PW L+ NF+
Sbjct: 529 ESMLASERRLEDSGY-------------------KCVVDSQDEEDDSLFIIPWQLTKNFI 569
Query: 949 ACTNQDRENIERLEITGVGDPSGRGLGFSY 978
N LE+ G DP+G G GFS+
Sbjct: 570 NAANGKG----LLELVGPADPTGIGEGFSF 595
>gi|169618084|ref|XP_001802456.1| hypothetical protein SNOG_12230 [Phaeosphaeria nodorum SN15]
gi|160703546|gb|EAT80642.2| hypothetical protein SNOG_12230 [Phaeosphaeria nodorum SN15]
Length = 1084
Score = 155 bits (391), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 112/349 (32%), Positives = 167/349 (47%), Gaps = 34/349 (9%)
Query: 646 KSLRPPGAFKKKSDLSVKDGH-VFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGA 704
K+L+P AF DL+V D + L EY EE P LSN GMG + YY++ D A
Sbjct: 530 KNLKPSEAFAVAEDLNVGDNSDLLLAEYSEEYPTTLSNFGMGVKIINYYRRKDMEDTARP 589
Query: 705 LLCSGNNCLGNVLTLEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLV 762
G +G L P DKSPF G ++ G ++ MYRAPVF HK +TDFL+
Sbjct: 590 KRDDG---IGETSVLLPQDKSPFSLFGQVEPGQEVLTMHNAMYRAPVFKHKPESTDFLVS 646
Query: 763 RSAKG----KISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAK 818
RS G K +R I + VV QQ P +EV ++ + S R+ + +R + +
Sbjct: 647 RSHTGVNGTKWFMRTIPNLMVVGQQFPSVEVPGTHARKVTEASKKRLKMLAFRLYRRGKE 706
Query: 819 RGLL-PCIGVDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLR 877
RG P + + + P A R +++E ++D W IP E LR
Sbjct: 707 RGARQPWVSNEMIKQHLPGTEIAQNRSRMREIMKYQKDIG---TWEPVAGETIPEEPILR 763
Query: 878 KLAYPEHVCSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQ 937
PE VC +SM AG +L+ GI +++ D+ A + +++
Sbjct: 764 TWIKPEDVCLIDSMHAGDKQLQDAGIKS-----------NEIRDDEEEQDAENM---DVK 809
Query: 938 ITPWNLSSNFV-ACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKA 985
+ PWN + NF+ AC + LE+ G GDP+G+GLGFS+++ + K
Sbjct: 810 LAPWNTTKNFLNACAGK-----AMLELHGEGDPTGQGLGFSFIKVSMKG 853
>gi|331218922|ref|XP_003322138.1| hypothetical protein PGTG_03675 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309301128|gb|EFP77719.1| hypothetical protein PGTG_03675 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 1131
Score = 154 bits (390), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/337 (31%), Positives = 172/337 (51%), Gaps = 32/337 (9%)
Query: 654 FKKKSDLSVKD-GHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNC 712
K +DL++KD G L EY EE P ++SN GMG+ L YY+K + D N+
Sbjct: 502 LKNTTDLTLKDTGPFMLFEYSEEAPPVISNVGMGSILVNYYRKQNELDDHIP-----NDD 556
Query: 713 LGNVLTLEPGDKSPFL--GDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSA---KG 767
+G L+ D+SPF+ G I+ G + +L N+ RAP+F H ++ +FL++R+ +
Sbjct: 557 IGEPFVLDVADESPFMKFGSIRPGETVPTLYNNLVRAPLFKHTPSSNEFLVIRNTTETET 616
Query: 768 KISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGV 827
IR ID + VV Q P++EV P S+ T +R+ ++ + ++ G I +
Sbjct: 617 NYYIRPIDHLYVVGQTYPVVEVPGPHSRKTTTQLKHRLQTIAFK-LCSKSEDGR---IRI 672
Query: 828 DELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCS 887
++ F + +E +R++LKE R G+ + W+++ +P + ++ KL PE VC
Sbjct: 673 GKVMKYFNDQNEMQMRQRLKEFMEYTRKGHNQGFWTIRPGLKVPDKEEIFKLVTPEGVCL 732
Query: 888 YESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNF 947
ESMQ G +L G + A I S ++ E Q+ PW+ + NF
Sbjct: 733 AESMQVGQRQLLDAGYGK---DADIEGDGDD----------QSKLDIEQQLAPWSTTKNF 779
Query: 948 VACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPK 984
+A T+ N L + G GDPSGRG FS++R + K
Sbjct: 780 LAATS----NKAMLRLYGEGDPSGRGEAFSFIRVSMK 812
>gi|345564845|gb|EGX47804.1| hypothetical protein AOL_s00083g16 [Arthrobotrys oligospora ATCC
24927]
Length = 1072
Score = 154 bits (390), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 109/347 (31%), Positives = 163/347 (46%), Gaps = 40/347 (11%)
Query: 654 FKKKSDLSVKDGHVF-LMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNC 712
F LS+ D F L EY EE P +LSN GMG+ + YY++ D+ + C
Sbjct: 480 FHDTKSLSLSDNSNFILFEYSEEHPYVLSNFGMGSRVINYYRRKEDSDE------TRPKC 533
Query: 713 -LGNVLTLEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVR---SAK 766
LG + L DKSPF G I+ G +L M RAP+F H A TDF++VR S
Sbjct: 534 ELGELQVLMSQDKSPFWNFGSIEPGEIVPALYNRMIRAPIFKHTPANTDFVVVRNTDSGG 593
Query: 767 GKISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIG 826
+R I + V Q P+ +V P S+ + T S NRM + YR R I
Sbjct: 594 AYYYLRTIPYIFTVGQTFPVTDVPGPHSRKVTTASKNRMKMITYRVIGRKGNR-----IA 648
Query: 827 VDELSVQFPNLSEAIIRKKLKECAFL----RRDGNGKQVWSMKRTFHIPSEGDLRKLAYP 882
V +++ FP +E R+K+KE F+ R+ W +K IP E ++R + P
Sbjct: 649 VKDIAPHFPENTEIQTRQKMKE--FMSHQNERESEKGGYWYLKGDDPIPDEANIRTMVTP 706
Query: 883 EHVCSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWN 942
E VC ++MQ G+ L+ G + T A + DE ++ E ++ PW
Sbjct: 707 ESVCLLDAMQVGVKYLEDAGYGKAT------DAGAGEEDEKEGMST------EEKLAPWI 754
Query: 943 LSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSS 989
+ NF+ T + L++ G GDP+GRG FS+++ + K +
Sbjct: 755 ATKNFINAT----QGKAMLQLHGEGDPTGRGEAFSFIKTSMKGGFKA 797
>gi|388579559|gb|EIM19881.1| hypothetical protein WALSEDRAFT_21498 [Wallemia sebi CBS 633.66]
Length = 1034
Score = 154 bits (390), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 108/334 (32%), Positives = 162/334 (48%), Gaps = 34/334 (10%)
Query: 659 DLSVKDGHVF-LMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVL 717
DL++KDG + L EY EE P ++SN GMG+ L YY+K DQ + + G
Sbjct: 363 DLTLKDGTNYALWEYSEEYPSIMSNFGMGSVLVNYYRKK---DQHDDHVPKSD--FGEPF 417
Query: 718 TLEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSA---KGKISIR 772
L+ D+SPF LG + +G + +L N+ RAP+F H+ TDFL++RS + IR
Sbjct: 418 VLDVADESPFMKLGFVDSGQTIPTLYNNLIRAPLFRHQANPTDFLVIRSTSRHETSYFIR 477
Query: 773 RIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSV 832
I V +V Q P+ V P S+ + + R+ Y+ L+ +D L
Sbjct: 478 EIKNVFLVGQTYPVSAVPGPHSRMITNTTKYRLQAIAYKLLKRTKGERLI----LDRLWK 533
Query: 833 QFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQ 892
F + +E +R++LKE R G W +K T IP ++ KL PEHV E+MQ
Sbjct: 534 YFQDQNEMQMRQRLKEFMEYNRKGEHAGYWRLKATAKIPENEEILKLVSPEHVALCEAMQ 593
Query: 893 AGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAA--SHIERELQITPWNLSSNFVAC 950
G RL + + + DE+ A + + E Q+ PW + NFV
Sbjct: 594 VGQRRL-------------LDAGYGNVEDESQDTTAGDETKLSIEQQLAPWITTKNFVNA 640
Query: 951 TNQDRENIERLEITGVGDPSGRGLGFSYVRAAPK 984
T ++ L++ G GDPSGRG FS++R + K
Sbjct: 641 T----QSKAMLKLYGEGDPSGRGEAFSFIRVSMK 670
>gi|320593142|gb|EFX05551.1| transcription factor tfiid complex [Grosmannia clavigera kw1407]
Length = 1126
Score = 154 bits (390), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 118/389 (30%), Positives = 185/389 (47%), Gaps = 52/389 (13%)
Query: 654 FKKKSDLSVKDGHV-FLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNC 712
F + DL++ D L EYCEE P ++SN GMG + YY++ S D+
Sbjct: 547 FAQSKDLTLGDNSTAVLFEYCEEIPTVMSNFGMGNKIINYYRRKSKVDEERPPKPD---- 602
Query: 713 LGNVLTLEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGK-- 768
LG + L P DKSPF G + G + +L M+ AP+F HK +TDFL R+ +
Sbjct: 603 LGELSFLLPEDKSPFSNFGSVDPGETVPTLHNPMFHAPIFKHKARSTDFLFGRTHTSQDG 662
Query: 769 --ISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIG 826
+R+ID + VV Q PL EV P S+ + S NR+ + YR S K G +
Sbjct: 663 TSYYLRKIDHLFVVGQTFPLAEVPGPHSRKVTALSKNRLKMVAYRMIS---KNG---SVS 716
Query: 827 VDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVC 886
+ +++ + ++A R+KLKE FL D K W +K + + + P+ VC
Sbjct: 717 LSDITSHVKDSNDAQNRQKLKE--FLHYDKESK-TWGLKPNDTLMDLATINSMIKPDDVC 773
Query: 887 SYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSN 946
+++MQ G L G QL A++ + E +A++ + PW + +
Sbjct: 774 LHDAMQVGQNELAQNGY-QLDDNAALDDIDDENDKENMAMS----------MVPWKTTKS 822
Query: 947 FV-ACTNQDRENIERLEITGVGDPSGRGLGFSYVRAA-----------PKASVSSAMVKK 994
F+ AC + L++ G GDP+G+GLGFS++R + P A+ + AM ++
Sbjct: 823 FIDACAGK-----AMLQLHGAGDPTGKGLGFSFIRTSMKGGFMGAIQGPAATSADAMERE 877
Query: 995 KAAANRGGSTVTGTDADLRRLSMEAAREV 1023
+ A N V DA L EA R++
Sbjct: 878 RKANNGHMYNVKKQDA----LYNEAIRKI 902
>gi|145519938|ref|XP_001445830.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124413296|emb|CAK78433.1| unnamed protein product [Paramecium tetraurelia]
Length = 1270
Score = 154 bits (389), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 134/456 (29%), Positives = 207/456 (45%), Gaps = 83/456 (18%)
Query: 654 FKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSP------------GD- 700
+K+ +LS+ G+ LMEY E+RPLLL+N GM + + Y S GD
Sbjct: 694 YKQVENLSLSKGNFILMEYIEQRPLLLNNTGMCSKVTRYVYPSRALLQFNQKRIKDEGDN 753
Query: 701 ------------------QAGAL------LCSGNNCL----GNVLTLEPGDKS---PFLG 729
Q G + L N L GN+ + DK+ P G
Sbjct: 754 YNNFQENSLQGTYRSTYGQMGQISNEEMTLWEFKNMLVEQLGNIGQIRFLDKNGTIPLQG 813
Query: 730 DI--KAGCSQSSLETNMYRAPVFTHKVATTDFLLVRS----AKGKISIRRIDKVAVVAQQ 783
+ + + +E +YRAP+F K+ TDFLLVR+ K ++R ID + +V Q
Sbjct: 814 QLTDERFIGIAVIENELYRAPIFKQKLPATDFLLVRTRVDNCHYKYTLRPIDCIYLVGQI 873
Query: 784 EPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLSEAIIR 843
EP +E+ +P S+ L T+ N + + ++F + + DEL F S IR
Sbjct: 874 EPKVEIFTPHSRPLGTFLKNCLKTYIKKQFKMDQE------VKQDELEQIFQKQSHTNIR 927
Query: 844 KKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAY---PEHVCSYESMQAGLYRLKH 900
LKEC + +D + ++ W +R S D++ L Y VC YESM Y L+
Sbjct: 928 SALKECKGI-QDSSNQKTWRHQR----GSNDDIQVLKYDITANQVCLYESMLHSSYLLQE 982
Query: 901 LGITQL----TLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRE 956
G+ +L + ++ +S+ P + + A IE EL +T W+LS +F+ NQ
Sbjct: 983 FGLKELKNSDKMKKTLQEYLSRNPQDFNSWVIARRIEDELNMTAWSLSQSFLHSANQ--- 1039
Query: 957 NIERLEITGVGDP-SGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLRRL 1015
R+ + G+GDP SG G G +Y++ KA K + A V GT+ DLR+L
Sbjct: 1040 -TGRMLLYGIGDPTSGHG-GLNYIKKPLKARGE----KGQNAIQEKKPQVMGTENDLRKL 1093
Query: 1016 SMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSS 1051
+E + + K + E K RW MI KL++
Sbjct: 1094 HVEDIQNISRKLGLTTEPNLK--RWR---MINKLTA 1124
>gi|402219910|gb|EJT99982.1| hypothetical protein DACRYDRAFT_117598 [Dacryopinax sp. DJM-731
SS1]
Length = 1098
Score = 154 bits (389), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 109/337 (32%), Positives = 161/337 (47%), Gaps = 26/337 (7%)
Query: 654 FKKKSDLSVKDGHVFLM-EYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNC 712
++ SDL++KDG +L+ E+ EE P ++S+ GMGA L YY+K + GD
Sbjct: 433 MRRTSDLTLKDGSNYLLWEFSEEFPPIMSSIGMGAILVNYYRKRTEGDD-----HVPKAD 487
Query: 713 LGNVLTLEPGDKSPFL--GDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKG--- 767
+G LEP D+SPFL G + G +L N+ RAP+F HK TDFL+VRS +
Sbjct: 488 VGVAFVLEPKDESPFLKFGSAEPGQMVPTLYNNLIRAPLFRHKPYATDFLVVRSTQNGET 547
Query: 768 KISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGV 827
K +R I + VV Q P++ V P S+ + T R+ VYR + + I +
Sbjct: 548 KYFLREIKNLFVVGQTYPVVPVPGPHSRAITTTIKKRLEGIVYRLLKKSKQE----RIKI 603
Query: 828 DELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCS 887
L FP+ +E +R +LKE R G + W +K + + ++ L PE V
Sbjct: 604 SRLMKYFPDQNELQMRGRLKELMEYNRRGEHQGYWRLKSKHTLLPDSEIIALVTPESVVL 663
Query: 888 YESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNF 947
E+MQ G L G Q A + + E Q+ PW + NF
Sbjct: 664 CEAMQVGQRHLLDAGYGQAADGAGEEAEAG-------EGEDGEGMGIEQQLAPWIATKNF 716
Query: 948 VACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPK 984
+ T +N L++ G GDP+GRG FS+VR + K
Sbjct: 717 INAT----QNKAMLKLHGEGDPTGRGEAFSFVRVSMK 749
>gi|406865106|gb|EKD18149.1| hypothetical protein MBM_03921 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 1209
Score = 154 bits (388), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 108/342 (31%), Positives = 167/342 (48%), Gaps = 36/342 (10%)
Query: 653 AFKKKSDLSVKDGH--VFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGN 710
AFK DLS+ + + L+EY EE P +LSN GMG + YY++ + D+ G +
Sbjct: 526 AFKTTKDLSLSEYYSSATLIEYSEEHPTVLSNFGMGNRIVNYYRRKNAEDKEGP--AKPD 583
Query: 711 NCLGNVLTLEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKG- 767
+ +G+ L P D+SPF G ++ G + ++ MYRAP+F H+ + DFL+VRS+ G
Sbjct: 584 DHVGDSTILLPEDRSPFANFGTVEPGETVRAIHNGMYRAPIFKHEPKSEDFLVVRSSTGV 643
Query: 768 ---KISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPC 824
IR ID + V QQ P ME+ P ++ + S NRM + +R K +
Sbjct: 644 DGPSWHIRNIDNLFVAGQQLPSMEIPGPHARRVTNASKNRMKMIAFRMMRRHPKGEMQ-- 701
Query: 825 IGVDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRT-FHIPSEGDLRKLAYPE 883
+ L+ P +E ++K KE F+R D + K W +K + IP +R + PE
Sbjct: 702 --LSALTAHCPENTEIQNKQKAKE--FMRHDRDAK-AWKLKDSEGPIPDAAGIRAMVKPE 756
Query: 884 HVCSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNL 943
VC+ ++M+ GL LK G AS M + P E ++ PWN
Sbjct: 757 DVCAIDAMEVGLRHLKDSGFA-----ASEEVDMDREPGTETL---------EQKLAPWNT 802
Query: 944 SSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKA 985
+ F+ + LE+ G GDP+G GLG S ++ + K
Sbjct: 803 TKAFMDAAS----GKAMLELHGHGDPTGCGLGISMIKVSMKG 840
>gi|336464872|gb|EGO53112.1| hypothetical protein NEUTE1DRAFT_126497 [Neurospora tetrasperma FGSC
2508]
Length = 1067
Score = 153 bits (387), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 112/398 (28%), Positives = 184/398 (46%), Gaps = 52/398 (13%)
Query: 624 LIHLIRTKIHLLPRAQKLPGENKSLRPPGAFKKKSDLSVKDGHV-FLMEYCEERPLLLSN 682
L +LIR + + + L G+ S FK DLS+ D L EYCEE P +LSN
Sbjct: 499 LQYLIRFDKPAIIKRKTLKGKRVS----EVFKSTHDLSLNDNSTAILFEYCEEIPTVLSN 554
Query: 683 AGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLTLEPGDKSPF--LGDIKAGCSQSSL 740
GMG + Y++++ D G C+ L P D+SPF G + G +L
Sbjct: 555 FGMGQKIINYFRRAKGADSRPEKRELGETCI-----LMPEDRSPFAIFGHVHPGEVVPTL 609
Query: 741 ETNMYRAPVFTHKVATTDFLLVRSAKGKIS----IRRIDKVAVVAQQEPLMEVMSPGSKN 796
+M+RAP+F H TDFL+ RS+ G+ IR ID + VV Q P MEV P S+
Sbjct: 610 HNHMFRAPIFKHNPRNTDFLIGRSSTGQKGSTWYIRNIDHLYVVGQTLPSMEVPGPHSRR 669
Query: 797 LQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLSEAIIRKKLKECAFLRRDG 856
+ + NR+ + YR + + + +++ +E+ R+KLKE R++
Sbjct: 670 VTNIAKNRLKMVSYRLLRKSEH------VTLHDITKHVAESNESQNRQKLKEFLRFRKE- 722
Query: 857 NGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRLKHLGITQLTLPASISSAM 916
+ W++ + +E +R L PE VC ++MQ GL+ ++ G A
Sbjct: 723 --TKDWALPEGEELMAEPAIRSLVRPEEVCLLDAMQVGLHEIEKGGY----------DAT 770
Query: 917 SQLPDEAIALAAASHIEREL---QITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRG 973
L D+ I + + + ++ PW + F+ ++ L + G GDP+G+G
Sbjct: 771 DSLKDDDIGIDVNDELSPDALANKMAPWKTTKAFLDASH----GKAMLAVHGAGDPTGKG 826
Query: 974 LGFSYVRAAPKA----------SVSSAMVKKKAAANRG 1001
LG S++R + K + S+ ++++ AN G
Sbjct: 827 LGISFLRTSMKGGYLEQLQGPMATSADAIERQRKANGG 864
>gi|410083180|ref|XP_003959168.1| hypothetical protein KAFR_0I02540 [Kazachstania africana CBS 2517]
gi|372465758|emb|CCF60033.1| hypothetical protein KAFR_0I02540 [Kazachstania africana CBS 2517]
Length = 1081
Score = 153 bits (387), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 120/395 (30%), Positives = 178/395 (45%), Gaps = 52/395 (13%)
Query: 611 HKSLADQNVRPNSLIHLIRTKIHLLPRAQKLPGENKSLRPPGAFKKKSDLSVKD-GHVFL 669
H+ N+RPN+ + K R + K +R +F +DL++ D ++L
Sbjct: 481 HRPKFGSNIRPNTTFFFNKLKTRKRKR-----DKGKDVRE--SFTSTADLTIGDTAPIYL 533
Query: 670 MEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLTLEPGDKSPF-- 727
MEY E+ PL LS GM L YY+K + D L +G L DKSPF
Sbjct: 534 MEYSEQDPLALSKFGMANKLINYYRKYNEQDTLRPKLP-----VGETHVLGVQDKSPFWN 588
Query: 728 LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSA----KGKISIRRIDKVAVVAQQ 783
G ++ G +L NM RAPVF H V+ TDFLLVRS K +R I+ + V Q
Sbjct: 589 FGFVEPGHIVPTLYNNMVRAPVFKHGVSGTDFLLVRSTGNGTNNKFYLRNINHLFTVGQT 648
Query: 784 EPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLSEAIIR 843
P+ E+ P S+ + + R+ + VYR + R I ++ ++ FP+ R
Sbjct: 649 FPVEEIPGPNSRKVTSMRTTRLKMIVYRILNRTPNR----AISIEPITRHFPDQDYGQNR 704
Query: 844 KKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRLKHLGI 903
+K+KE +R+G K +W +K + + +KL PE V ESM GL +
Sbjct: 705 QKIKEFMKYQREGPDKGLWKLKEGEVLLDNENTKKLLLPEQVAEVESMSHGLQFWE---- 760
Query: 904 TQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENIERLEI 963
D ++ E + PWN++ NFV T Q R I+ I
Sbjct: 761 -----------------DNENYNFDEKLLKLEENLLPWNVTKNFVNAT-QMRAMIQ---I 799
Query: 964 TGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAA 998
G GDP+G G GFS++ K S+ VK ++A
Sbjct: 800 HGAGDPTGCGEGFSFL----KTSMKGGFVKSESAG 830
>gi|119193424|ref|XP_001247318.1| hypothetical protein CIMG_01089 [Coccidioides immitis RS]
gi|392863435|gb|EAS35814.2| transcription initiation factor TFIID complex 145kD subunit
[Coccidioides immitis RS]
Length = 1100
Score = 153 bits (387), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 105/333 (31%), Positives = 165/333 (49%), Gaps = 37/333 (11%)
Query: 660 LSVKDGH-VFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLT 718
LS+ D V L+EY EE P+++SN GMG+ + YY+K + D AL G +G
Sbjct: 534 LSLADNSTVLLVEYSEEHPMMMSNFGMGSRVINYYRKKNAED---ALRPKGE--VGETAV 588
Query: 719 LEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKG----KISIR 772
L P DKSPF G + G + +++ T M+ AP+F + TDFL+VR++ G +R
Sbjct: 589 LLPEDKSPFSTFGHVDPGETTTAIATGMFLAPLFRQEPKGTDFLVVRNSTGVEGASYYLR 648
Query: 773 RIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSV 832
I+ + V QQ P ++V P S+ + T + NR+ + YR+ ++ + V +++
Sbjct: 649 NIENLYVAGQQFPSVDVPGPHSRKVTTAAKNRLKMICYRQI----RKNRNHRVSVADITE 704
Query: 833 QFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQ 892
FP ++ R+K+KE FL+ + K+ W M+ IP E LR PE VC ESMQ
Sbjct: 705 HFPESTDMQNRQKMKE--FLQFSKDHKE-WEMRSGEPIPDEDVLRGYVKPEDVCLLESMQ 761
Query: 893 AGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTN 952
GL L G + + E Q+ PW + NF+ +
Sbjct: 762 VGLQYLHDAGYDREE--------------DEDDDGDKEGDSLEQQLAPWKATRNFLLAS- 806
Query: 953 QDRENIERLEITGVGDPSGRGLGFSYVRAAPKA 985
+ L++ G GDP+GRG GFS+++ + K
Sbjct: 807 ---QGKAMLQLHGEGDPTGRGEGFSFIKTSMKG 836
>gi|342878761|gb|EGU80059.1| hypothetical protein FOXB_09438 [Fusarium oxysporum Fo5176]
Length = 1304
Score = 153 bits (387), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 114/377 (30%), Positives = 175/377 (46%), Gaps = 46/377 (12%)
Query: 654 FKKKSDLSVKDGHV-FLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNC 712
F K DLS+ D L EYCE+RP +LS+ GMG L YY++ +
Sbjct: 504 FLKSKDLSINDNSTAVLYEYCEQRPRVLSSFGMGNRLINYYRRKDTNEDEQL----PKQE 559
Query: 713 LGNVLTLEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKIS 770
LG L P D+SPF G + G + +L MYRAPVF H +DFL+VRS G+
Sbjct: 560 LGEYRMLLPEDRSPFSLFGTVDPGETVPTLHNEMYRAPVFKHNPRGSDFLVVRSTTGEHG 619
Query: 771 IR----RIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIG 826
R +ID + VV QQ P +EV P S+ + S NRM + +R + C
Sbjct: 620 SRWFLHKIDHLYVVGQQFPSVEVPGPHSRKVTNASKNRMKMLAFRMIRHSDTDN---C-Q 675
Query: 827 VDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVC 886
+ +++ + ++ R+KLKE R+ K +W +K +P E +R + PE VC
Sbjct: 676 LSDITKHIADSTDTQNRQKLKEFLQYDRESGEKGMWRLKPGEILPDESTIRSMIKPEEVC 735
Query: 887 SYESMQAGLYRLKHLGI--TQLTLPASISS-------AMSQLPDEAIALAAASHIERELQ 937
++MQ G+ L+ G +L + + + IA A E++ +
Sbjct: 736 LLDAMQLGIKELEDAGYDPRNASLDEDVQNNDADGDDDDVEDEGSKIAKGAKKQQEKQEE 795
Query: 938 -----ITPWNLSSNFV-ACTNQDRENIERLEITGVGDPSGRGLGFSYVRAA--------- 982
+ PW + F+ AC + L++ G GDP+G GLGFS++R +
Sbjct: 796 TLADKMAPWKTTKAFIDACAQK-----AMLQLHGEGDPTGHGLGFSFIRTSMKGGYIEAV 850
Query: 983 --PKASVSSAMVKKKAA 997
P A+ + AM ++K A
Sbjct: 851 QGPLATSADAMEREKRA 867
>gi|350296976|gb|EGZ77953.1| hypothetical protein NEUTE2DRAFT_101405 [Neurospora tetrasperma FGSC
2509]
Length = 1067
Score = 153 bits (387), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 112/398 (28%), Positives = 184/398 (46%), Gaps = 52/398 (13%)
Query: 624 LIHLIRTKIHLLPRAQKLPGENKSLRPPGAFKKKSDLSVKDGHV-FLMEYCEERPLLLSN 682
L +LIR + + + L G+ S FK DLS+ D L EYCEE P +LSN
Sbjct: 499 LQYLIRFDKPAIIKRKTLKGKRVS----EVFKSTHDLSLNDNSTAILFEYCEEIPTVLSN 554
Query: 683 AGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLTLEPGDKSPF--LGDIKAGCSQSSL 740
GMG + Y++++ D G C+ L P D+SPF G + G +L
Sbjct: 555 FGMGQKIINYFRRAKGADNRPEKRELGETCI-----LMPEDRSPFAIFGHVHPGEVVPTL 609
Query: 741 ETNMYRAPVFTHKVATTDFLLVRSAKGKIS----IRRIDKVAVVAQQEPLMEVMSPGSKN 796
+M+RAP+F H TDFL+ RS+ G+ IR ID + VV Q P MEV P S+
Sbjct: 610 HNHMFRAPIFKHNPRNTDFLIGRSSTGQKGSTWYIRNIDHLYVVGQTLPSMEVPGPHSRR 669
Query: 797 LQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLSEAIIRKKLKECAFLRRDG 856
+ + NR+ + YR + + + +++ +E+ R+KLKE R++
Sbjct: 670 VTNIAKNRLKMVSYRLLRKSEH------VTLHDITKHVAESNESQNRQKLKEFLRFRKE- 722
Query: 857 NGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRLKHLGITQLTLPASISSAM 916
+ W++ + +E +R L PE VC ++MQ GL+ ++ G A
Sbjct: 723 --TKDWALPEGEELMAEPAIRSLVRPEEVCLLDAMQVGLHEIEKGGY----------DAT 770
Query: 917 SQLPDEAIALAAASHIEREL---QITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRG 973
L D+ I + + + ++ PW + F+ ++ L + G GDP+G+G
Sbjct: 771 DSLKDDDIGIDVNDELSPDALANKMAPWKTTKAFLDASH----GKAMLAVHGAGDPTGKG 826
Query: 974 LGFSYVRAAPKA----------SVSSAMVKKKAAANRG 1001
LG S++R + K + S+ ++++ AN G
Sbjct: 827 LGISFLRTSMKGGYLEQLQGPMATSADAIERQRKANGG 864
>gi|303312087|ref|XP_003066055.1| zinc knuckle containing protein [Coccidioides posadasii C735 delta
SOWgp]
gi|240105717|gb|EER23910.1| zinc knuckle containing protein [Coccidioides posadasii C735 delta
SOWgp]
gi|320040033|gb|EFW21967.1| transcription factor TFIID complex 145 kDa subunit [Coccidioides
posadasii str. Silveira]
Length = 1100
Score = 153 bits (387), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 105/333 (31%), Positives = 165/333 (49%), Gaps = 37/333 (11%)
Query: 660 LSVKDGH-VFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLT 718
LS+ D V L+EY EE P+++SN GMG+ + YY+K + D AL G +G
Sbjct: 534 LSLADNSTVLLVEYSEEHPMMMSNFGMGSRVINYYRKKNAED---ALRPKGE--VGETAV 588
Query: 719 LEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKG----KISIR 772
L P DKSPF G + G + +++ T M+ AP+F + TDFL+VR++ G +R
Sbjct: 589 LLPEDKSPFSTFGHVDPGETTTAIATGMFLAPLFRQEPKGTDFLVVRNSTGVEGASYYLR 648
Query: 773 RIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSV 832
I+ + V QQ P ++V P S+ + T + NR+ + YR+ ++ + V +++
Sbjct: 649 NIENLYVAGQQFPSVDVPGPHSRKVTTAAKNRLKMICYRQI----RKNRNHRVSVADITE 704
Query: 833 QFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQ 892
FP ++ R+K+KE FL+ + K+ W M+ IP E LR PE VC ESMQ
Sbjct: 705 HFPESTDMQNRQKMKE--FLQFSKDHKE-WEMRSGEPIPDEDVLRGYVKPEDVCLLESMQ 761
Query: 893 AGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTN 952
GL L G + + E Q+ PW + NF+ +
Sbjct: 762 VGLQYLHDAGYDREE--------------DEDDDGDKEGDSLEQQLAPWKATRNFLLAS- 806
Query: 953 QDRENIERLEITGVGDPSGRGLGFSYVRAAPKA 985
+ L++ G GDP+GRG GFS+++ + K
Sbjct: 807 ---QGKAMLQLHGEGDPTGRGEGFSFIKTSMKG 836
>gi|328849227|gb|EGF98411.1| hypothetical protein MELLADRAFT_118533 [Melampsora larici-populina
98AG31]
Length = 1119
Score = 153 bits (387), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 110/337 (32%), Positives = 168/337 (49%), Gaps = 34/337 (10%)
Query: 654 FKKKSDLSVKD-GHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNC 712
K +DL++KD G L EY EE P ++SN GMG+ L YY+K + D+ +
Sbjct: 522 LKTTADLTLKDTGAFMLFEYSEEAPPVISNVGMGSILVNYYRKKNANDE-----YVPKDD 576
Query: 713 LGNVLTLEPGDKSPFL--GDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRS---AKG 767
LG L+ D SPF+ G I G + +L N+ RAP+F HK TDFL+++S +
Sbjct: 577 LGEPFVLDVADASPFMKFGSIPPGETVPTLYNNLVRAPLFKHKANETDFLVIKSVTETET 636
Query: 768 KISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGV 827
IR I+ V V+ Q P +EV P S+ + + R L N+ + + +R + +
Sbjct: 637 NYYIRAIENVFVIGQTFPAVEVPGPHSRKITNLTKLR-LHNIAQRLT---ERSTDSRLKI 692
Query: 828 DELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCS 887
L F + +E +R++LKE R G + W+M+ F +P DL KL+ PE VC
Sbjct: 693 QTLMKYFNDQNELQMRQRLKEFMEYVRRGQNQGYWTMRSNFKLPE--DLLKLSTPEWVCL 750
Query: 888 YESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNF 947
ESMQ G +L G + A D+ S ++ E Q+ PW+ + NF
Sbjct: 751 AESMQVGQRQLLDAGY------GKDADAEGDGEDQ-------SKLDIEQQLAPWSTTKNF 797
Query: 948 VACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPK 984
+ Q ++ L + G GDPSGRG FS+++ + K
Sbjct: 798 L----QAAQSKAMLRLYGEGDPSGRGEAFSFIKVSMK 830
>gi|85119669|ref|XP_965687.1| hypothetical protein NCU02556 [Neurospora crassa OR74A]
gi|28927499|gb|EAA36451.1| hypothetical protein NCU02556 [Neurospora crassa OR74A]
Length = 1067
Score = 153 bits (386), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 112/398 (28%), Positives = 184/398 (46%), Gaps = 52/398 (13%)
Query: 624 LIHLIRTKIHLLPRAQKLPGENKSLRPPGAFKKKSDLSVKDGHV-FLMEYCEERPLLLSN 682
L +LIR + + + L G+ S FK DLS+ D L EYCEE P +LSN
Sbjct: 499 LQYLIRFDKPAIIKRKTLKGKRVS----EVFKSTHDLSLNDNSTAILFEYCEEIPTVLSN 554
Query: 683 AGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLTLEPGDKSPF--LGDIKAGCSQSSL 740
GMG + Y++++ D G C+ L P D+SPF G + G +L
Sbjct: 555 FGMGQKIINYFRRAKGADSRPEKRELGETCI-----LMPEDRSPFAIFGHVHPGEVVPTL 609
Query: 741 ETNMYRAPVFTHKVATTDFLLVRSAKGKIS----IRRIDKVAVVAQQEPLMEVMSPGSKN 796
+M+RAP+F H TDFL+ RS+ G+ IR ID + VV Q P MEV P S+
Sbjct: 610 HNHMFRAPIFKHNPRNTDFLIGRSSTGQKGSTWYIRNIDHLYVVGQTLPSMEVPGPHSRR 669
Query: 797 LQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLSEAIIRKKLKECAFLRRDG 856
+ + NR+ + YR + + + +++ +E+ R+KLKE R++
Sbjct: 670 VTNIAKNRLKMVSYRLLRKSEH------VTLHDITKHVAESNESQNRQKLKEFLRFRKE- 722
Query: 857 NGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRLKHLGITQLTLPASISSAM 916
+ W++ + +E +R L PE VC ++MQ GL+ ++ G A
Sbjct: 723 --TKDWALPEGEELMAEPAIRSLVRPEEVCLLDAMQVGLHEIEKGGY----------DAT 770
Query: 917 SQLPDEAIALAAASHIEREL---QITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRG 973
L D+ I + + + ++ PW + F+ ++ L + G GDP+G+G
Sbjct: 771 DSLKDDDIGVDVNDELSPDALANKMAPWKTTKAFLDASH----GKAMLAVHGAGDPTGKG 826
Query: 974 LGFSYVRAAPKA----------SVSSAMVKKKAAANRG 1001
LG S++R + K + S+ ++++ AN G
Sbjct: 827 LGISFLRTSMKGGYLEQLQGPMATSADAIERQRKANGG 864
>gi|452005009|gb|EMD97465.1| hypothetical protein COCHEDRAFT_1086465 [Cochliobolus
heterostrophus C5]
Length = 1123
Score = 153 bits (386), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 109/349 (31%), Positives = 162/349 (46%), Gaps = 34/349 (9%)
Query: 646 KSLRPPGAFKKKSDLSVKDGH-VFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGA 704
K+L+P AF DL++ D + L EY EE P LSN GMG + YY++ D A
Sbjct: 530 KNLKPSEAFATAEDLNIGDNSDLLLAEYSEEYPTTLSNFGMGIKILNYYRRKDMEDTARP 589
Query: 705 LLCSGNNCLGNVLTLEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLV 762
G +G L P DKSPF G ++ G +L MYRAPVF HK TDFL+
Sbjct: 590 KPEDG---IGETSILLPQDKSPFSLFGQVEPGQQVLTLHNAMYRAPVFKHKPEETDFLVS 646
Query: 763 RSAKG----KISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAK 818
RS G + +R I + VV QQ P +EV ++ + S R+ + +R + +
Sbjct: 647 RSWTGVNGPRYYMRTIPNLMVVGQQFPSVEVPGTHARKVTEASKKRLKMLAFRLYRKGQQ 706
Query: 819 RGLL-PCIGVDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLR 877
RG P + + + P A R +++E ++D W +P E LR
Sbjct: 707 RGARQPWVSNEMIKQHLPGTEIAQNRSRMREIMKYQKDIG---TWEPVPGETVPEEPILR 763
Query: 878 KLAYPEHVCSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQ 937
PE VC +SM AG +L+ GI + A + +++
Sbjct: 764 TWIKPEDVCLIDSMHAGDKQLQDAGIKSNEI--------------RDDDDEADNENADVK 809
Query: 938 ITPWNLSSNFV-ACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKA 985
+ PWN + NF+ AC + LE+ G GDP+G+GLGFS+++ + K
Sbjct: 810 LAPWNTTKNFLNACAGK-----AMLELHGEGDPTGQGLGFSFIKVSMKG 853
>gi|156841986|ref|XP_001644363.1| hypothetical protein Kpol_513p21 [Vanderwaltozyma polyspora DSM
70294]
gi|156115004|gb|EDO16505.1| hypothetical protein Kpol_513p21 [Vanderwaltozyma polyspora DSM
70294]
Length = 1038
Score = 153 bits (386), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 107/340 (31%), Positives = 164/340 (48%), Gaps = 41/340 (12%)
Query: 653 AFKKKSDLSVKD-GHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNN 711
+F DL+ D V+LMEY EE P+ LS GM L YY+K D L G
Sbjct: 502 SFASSQDLTTGDTAPVYLMEYSEETPIALSKFGMANKLINYYRKMHEQDTTRPKLPVGET 561
Query: 712 CLGNVLTLEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSA---- 765
+VL ++ DKSPF G ++ G +L NM RAPVF H V TDFL++RS+
Sbjct: 562 ---HVLGVQ--DKSPFWNFGFVEPGHIVPTLYNNMIRAPVFKHDVPGTDFLIIRSSGCGT 616
Query: 766 KGKISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCI 825
+ +R I+ + V Q P+ E+ P S+ + + + R+ + VYR + + I
Sbjct: 617 SNRFFLRPINHLFAVGQTFPVDEIPGPNSRKVTSMRMTRLRMIVYRILNKTPSK----AI 672
Query: 826 GVDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHV 885
+D ++ FP+ R+K+KE +RDG K +W +K + + +KL PE V
Sbjct: 673 SLDPIARHFPDQDYGQSRQKVKEFMKYQRDGTEKGLWKLKDGEPLLDNENTKKLITPEQV 732
Query: 886 CSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSS 945
ESM +G+ + + DE + ++ E + PWN++
Sbjct: 733 AEVESMNSGIIYKEDNDLFNF--------------DEKL-------VKLEENLLPWNIAR 771
Query: 946 NFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKA 985
NF+ T Q R I+ I GVGDP+G G GFS+++ + K
Sbjct: 772 NFINAT-QMRAMIQ---IHGVGDPTGIGEGFSFLKTSMKG 807
>gi|408390194|gb|EKJ69601.1| hypothetical protein FPSE_10230 [Fusarium pseudograminearum CS3096]
Length = 1233
Score = 153 bits (386), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 112/378 (29%), Positives = 170/378 (44%), Gaps = 47/378 (12%)
Query: 654 FKKKSDLSVKDGHV-FLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNC 712
F K DLS+ D L EYCE+RP +LS+ GMG L YY++ +
Sbjct: 508 FLKSKDLSINDNSTAVLYEYCEQRPRVLSSFGMGNRLINYYRRKDTTEDEQL----PKQD 563
Query: 713 LGNVLTLEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKIS 770
LG L P D+SPF G + G + +L MYRAPVF H +DFL+VRS G+
Sbjct: 564 LGEYRMLLPEDRSPFSLFGTVDPGETVPTLHNEMYRAPVFKHNPRGSDFLVVRSTTGENG 623
Query: 771 IR----RIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIG 826
R +ID + VV QQ P +EV P S+ + S NRM + +R +
Sbjct: 624 SRWFLHKIDHLYVVGQQFPSVEVPGPHSRKVTNASKNRMKMLAFRMI----RHSDTDNCQ 679
Query: 827 VDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVC 886
+ +++ + ++ R+KLKE RD K +W +K +P E +R + PE VC
Sbjct: 680 LSDITKHIADSTDTQNRQKLKEFLQYDRDSGEKGMWRLKPGEILPDESAIRSMIKPEEVC 739
Query: 887 SYESMQAGLYRLKHLGI----------TQLTLPASISSAMSQLPDEAIALAAASHIEREL 936
++MQ G+ L+ G Q + + A E++
Sbjct: 740 LLDAMQLGIKELEDAGYDPRNASLDEDVQNNDAEGEEEDVDDEGSKVAKGGAKKQQEKQE 799
Query: 937 Q-----ITPWNLSSNFV-ACTNQDRENIERLEITGVGDPSGRGLGFSYVRAA-------- 982
+ + PW + F+ AC + L++ G GDP+G GLGFS++R +
Sbjct: 800 ETLADKMAPWKTTKAFIDACAQK-----AMLQLHGEGDPTGHGLGFSFIRTSMKGGYIEA 854
Query: 983 ---PKASVSSAMVKKKAA 997
P A+ + AM ++K A
Sbjct: 855 VQGPLATSADAMEREKRA 872
>gi|367006556|ref|XP_003688009.1| hypothetical protein TPHA_0L02240 [Tetrapisispora phaffii CBS 4417]
gi|357526315|emb|CCE65575.1| hypothetical protein TPHA_0L02240 [Tetrapisispora phaffii CBS 4417]
Length = 1041
Score = 152 bits (385), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 111/362 (30%), Positives = 171/362 (47%), Gaps = 41/362 (11%)
Query: 653 AFKKKSDLSVKDGH-VFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNN 711
+F DL++ D ++LMEY EERPL LS GM + L YY+K+ D L G
Sbjct: 501 SFALSQDLTIGDSAPIYLMEYSEERPLALSKFGMTSKLINYYRKTDEQDTTRPKLQVGET 560
Query: 712 CLGNVLTLEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRS----A 765
+VL ++ DKSPF G ++ G +L NM RAPVF H+V+ TDFLL++S A
Sbjct: 561 ---HVLGVQ--DKSPFWNFGFVEPGHIVPTLYNNMIRAPVFKHEVSGTDFLLIKSSGCGA 615
Query: 766 KGKISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCI 825
+ +R I+ + V Q P+ E+ P S+ + + + RM + VYR + KR I
Sbjct: 616 GNRFFLRGINHLFTVGQTFPVDEIPGPNSRKVTSMRMTRMKMIVYRILNKTPKR----AI 671
Query: 826 GVDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHV 885
+D ++ FP+ R+K+KE +R+G K +W +K + + RKL PE V
Sbjct: 672 SLDPIARHFPDQDYGQNRQKVKEFMKYQREGPEKGLWKLKEGEPMLDNINARKLITPEQV 731
Query: 886 CSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSS 945
ES+ + + + L ++ + L E + WN+S
Sbjct: 732 AEVESLNQD-------------IAFKEDNELFNLDEKLVKL--------EENLLSWNISK 770
Query: 946 NFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTV 1005
NFV T Q R + +I G+GDP+G GFS+++ + K K S
Sbjct: 771 NFVNAT-QMRAMV---QINGIGDPTGCNEGFSFLKTSMKGGFLKNRTKNDTNTASSSSLA 826
Query: 1006 TG 1007
+G
Sbjct: 827 SG 828
>gi|451855563|gb|EMD68855.1| hypothetical protein COCSADRAFT_109876 [Cochliobolus sativus
ND90Pr]
Length = 1123
Score = 152 bits (385), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 109/349 (31%), Positives = 162/349 (46%), Gaps = 34/349 (9%)
Query: 646 KSLRPPGAFKKKSDLSVKDGH-VFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGA 704
K+L+P AF DL++ D + L EY EE P LSN GMG + YY++ D A
Sbjct: 530 KNLKPSEAFATAEDLNIGDNSDLLLAEYSEEYPTTLSNFGMGIKILNYYRRKDMEDTARP 589
Query: 705 LLCSGNNCLGNVLTLEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLV 762
G +G L P DKSPF G ++ G +L MYRAPVF HK TDFL+
Sbjct: 590 KPEDG---IGETSILLPQDKSPFSLFGQVEPGQQVLTLHNAMYRAPVFKHKPEETDFLVS 646
Query: 763 RSAKG----KISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAK 818
RS G + +R I + VV QQ P +EV ++ + S R+ + +R + +
Sbjct: 647 RSWTGVNGPRYYMRTIPNLMVVGQQFPSVEVPGTHARKVTEASKKRLKMLAFRLYRKGQQ 706
Query: 819 RGLL-PCIGVDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLR 877
RG P + + + P A R +++E ++D W +P E LR
Sbjct: 707 RGARQPWVSNEMIKQHLPGTEIAQNRSRMREIMKYQKDIG---TWEPVPGETVPEEPILR 763
Query: 878 KLAYPEHVCSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQ 937
PE VC +SM AG +L+ GI + A + +++
Sbjct: 764 TWIKPEDVCLIDSMHAGDKQLQDAGIKSNEI--------------RDDDDEADNENADVK 809
Query: 938 ITPWNLSSNFV-ACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKA 985
+ PWN + NF+ AC + LE+ G GDP+G+GLGFS+++ + K
Sbjct: 810 LAPWNTTKNFLNACAGK-----AMLELHGEGDPTGQGLGFSFIKVSMKG 853
>gi|444318695|ref|XP_004180005.1| hypothetical protein TBLA_0C06940 [Tetrapisispora blattae CBS 6284]
gi|387513046|emb|CCH60486.1| hypothetical protein TBLA_0C06940 [Tetrapisispora blattae CBS 6284]
Length = 1035
Score = 152 bits (384), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 108/362 (29%), Positives = 171/362 (47%), Gaps = 45/362 (12%)
Query: 653 AFKKKSDLSVKDGH-VFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNN 711
+F DL+V D ++LMEY E+ P+ LS GM + L YY+K + D + L
Sbjct: 437 SFATTQDLTVGDSAPIYLMEYSEQTPISLSKFGMASKLINYYRKLNENDTSRPKLP---- 492
Query: 712 CLGNVLTLEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKI 769
+G L DKSPF G ++ G +L NM+RAP+F H+V+ TDFLL+RS+ I
Sbjct: 493 -VGETHVLGVHDKSPFWNFGYVEPGNIVPTLYNNMFRAPIFAHEVSGTDFLLIRSSGNGI 551
Query: 770 S----IRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCI 825
+ ++ I+ + V Q P+ E+ SP S+ R+ + VYR + + R +
Sbjct: 552 NNRFYLKSINNLFTVGQTLPIDEIPSPNSRKFTALRSLRLRMIVYRCLNRSPSR----SV 607
Query: 826 GVDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHV 885
++E++ FP+ R K+K+ +RDG K +W +K + + + R L PE +
Sbjct: 608 SIEEITKHFPDQDLTQNRAKVKDFMKFQRDGPEKGLWKLKENEPLLNNANARNLISPEQI 667
Query: 886 CSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSS 945
ESM GL + K D + + E + PWN +
Sbjct: 668 SEVESMGQGL-QFKQ--------------------DNELFNFDRKLVNLEENLLPWNSTK 706
Query: 946 NFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTV 1005
NF++ T Q R L+I G GDP+G G GFS++ K S+ +K + G +
Sbjct: 707 NFISAT-QLRA---MLQIHGAGDPTGCGEGFSFL----KTSMKGGFIKTDNTKSNGSGSN 758
Query: 1006 TG 1007
+G
Sbjct: 759 SG 760
>gi|330934967|ref|XP_003304774.1| hypothetical protein PTT_17450 [Pyrenophora teres f. teres 0-1]
gi|311318430|gb|EFQ87093.1| hypothetical protein PTT_17450 [Pyrenophora teres f. teres 0-1]
Length = 1126
Score = 152 bits (384), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 108/349 (30%), Positives = 162/349 (46%), Gaps = 34/349 (9%)
Query: 646 KSLRPPGAFKKKSDLSVKDGH-VFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGA 704
K+L+P AF DL++ D + L EY EE P LSN GMG + YY++ D A
Sbjct: 533 KNLKPSEAFASAEDLNIGDNSDLLLAEYSEEYPTTLSNFGMGVKILNYYRRKDMDDTARP 592
Query: 705 LLCSGNNCLGNVLTLEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLV 762
G +G L P DKSPF G ++ G +L MYRAPVF HK TDFL+
Sbjct: 593 KPEDG---IGETSVLLPQDKSPFSLFGTVEPGQQVLTLHNAMYRAPVFKHKPEETDFLVS 649
Query: 763 RSAKG----KISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAK 818
RS G + +R I + VV QQ P +EV ++ + S R+ + +R + +
Sbjct: 650 RSWTGVNGPRYYMRNIPNLMVVGQQFPSVEVPGTHARKVTEASKKRLKMLAFRLYRKGQQ 709
Query: 819 RGLL-PCIGVDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLR 877
+G P + + + P A R +++E ++D W +P E LR
Sbjct: 710 KGARQPWVSNEMIKQHLPGTEIAQNRSRMREIMKYQKDIG---TWEPVPGETVPEEPILR 766
Query: 878 KLAYPEHVCSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQ 937
PE VC +SM AG +L+ GI + A + +++
Sbjct: 767 TWIKPEDVCLIDSMHAGDKQLQDAGIKSNEI--------------RDDDDEADNENADVK 812
Query: 938 ITPWNLSSNFV-ACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKA 985
+ PWN + NF+ AC + LE+ G GDP+G+GLGFS+++ + K
Sbjct: 813 LAPWNTTKNFLNACAGK-----AMLELHGDGDPTGQGLGFSFIKVSMKG 856
>gi|189194607|ref|XP_001933642.1| transcription factor TFIID complex subunit Taf111 [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187979206|gb|EDU45832.1| transcription factor TFIID complex subunit Taf111 [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 1045
Score = 152 bits (383), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 108/349 (30%), Positives = 162/349 (46%), Gaps = 34/349 (9%)
Query: 646 KSLRPPGAFKKKSDLSVKDGH-VFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGA 704
K+L+P AF DL++ D + L EY EE P LSN GMG + YY++ D A
Sbjct: 452 KNLKPSEAFASAEDLNIGDNSDLLLAEYSEEYPTTLSNFGMGVKILNYYRRKDMDDTARP 511
Query: 705 LLCSGNNCLGNVLTLEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLV 762
G +G L P DKSPF G ++ G +L MYRAPVF HK TDFL+
Sbjct: 512 KPEDG---IGETSVLLPQDKSPFSLFGTVEPGQQVLTLHNAMYRAPVFKHKPEETDFLVS 568
Query: 763 RSAKG----KISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAK 818
RS G + +R I + VV QQ P +EV ++ + S R+ + +R + +
Sbjct: 569 RSYTGVNGNRYYMRNIPNLMVVGQQFPSVEVPGTHARKVTEASKKRLKMLAFRLYRKGQQ 628
Query: 819 RGLL-PCIGVDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLR 877
+G P + + + P A R +++E ++D W +P E LR
Sbjct: 629 KGARQPWVSNEMIKQHLPGTEIAQNRSRMREIMKYQKDIG---TWEPVPGETVPEEPILR 685
Query: 878 KLAYPEHVCSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQ 937
PE VC +SM AG +L+ GI + A + +++
Sbjct: 686 TWIKPEDVCLIDSMHAGDKQLQDAGIKSNEI--------------RDDDDEADNENADVK 731
Query: 938 ITPWNLSSNFV-ACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKA 985
+ PWN + NF+ AC + LE+ G GDP+G+GLGFS+++ + K
Sbjct: 732 LAPWNTTKNFLNACAGK-----AMLELHGDGDPTGQGLGFSFIKVSMKG 775
>gi|46134979|ref|XP_389514.1| hypothetical protein FG09338.1 [Gibberella zeae PH-1]
Length = 1134
Score = 151 bits (382), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 112/378 (29%), Positives = 170/378 (44%), Gaps = 47/378 (12%)
Query: 654 FKKKSDLSVKDGHV-FLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNC 712
F K DLS+ D L EYCE+RP +LS+ GMG L YY++ +
Sbjct: 508 FLKSKDLSINDNSTAVLYEYCEQRPRVLSSFGMGNRLINYYRRKDTTEDEQL----PKQD 563
Query: 713 LGNVLTLEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKIS 770
LG L P D+SPF G + G + +L MYRAPVF H +DFL+VRS G+
Sbjct: 564 LGEYRMLLPEDRSPFSLFGTVDPGETVPTLHNEMYRAPVFKHNPRGSDFLVVRSTTGENG 623
Query: 771 IR----RIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIG 826
R +ID + VV QQ P +EV P S+ + S NRM + +R +
Sbjct: 624 SRWFLHKIDHLYVVGQQFPSVEVPGPHSRKVTNASKNRMKMLAFRMIRHSDTDNCQ---- 679
Query: 827 VDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVC 886
+ +++ + ++ R+KLKE RD K +W +K +P E +R + PE VC
Sbjct: 680 LSDITKHIADSTDTQNRQKLKEFLQYDRDSGEKGMWRLKPGEILPDESAIRSMIKPEEVC 739
Query: 887 SYESMQAGLYRLKHLGI----------TQLTLPASISSAMSQLPDEAIALAAASHIEREL 936
++MQ G+ L+ G Q + + A E++
Sbjct: 740 LLDAMQLGIKELEDAGYDPRNASLDEDVQNNDAEGEEEDVDDEGSKVAKGGAKKQQEKQE 799
Query: 937 Q-----ITPWNLSSNFV-ACTNQDRENIERLEITGVGDPSGRGLGFSYVRAA-------- 982
+ + PW + F+ AC + L++ G GDP+G GLGFS++R +
Sbjct: 800 ETLADKMAPWKTTKAFIDACAQK-----AMLQLHGEGDPTGHGLGFSFIRTSMKGGYIEA 854
Query: 983 ---PKASVSSAMVKKKAA 997
P A+ + AM ++K A
Sbjct: 855 VQGPLATSADAMEREKRA 872
>gi|190346834|gb|EDK39012.2| hypothetical protein PGUG_03110 [Meyerozyma guilliermondii ATCC 6260]
Length = 1056
Score = 151 bits (382), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 113/366 (30%), Positives = 176/366 (48%), Gaps = 31/366 (8%)
Query: 656 KKSDLSVKDGHVFL-MEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLG 714
K SDL+ D L +EY E+ P +LSN GMG+ + YY+K D A G
Sbjct: 469 KTSDLTNADTSSLLALEYSEQYPPILSNFGMGSKIINYYRKEKDDDNARPKAPIGET--- 525
Query: 715 NVLTLEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRS----AKGK 768
+VL +E D+SPF G + G +L NM RAP+F +++ TDFLLVRS + K
Sbjct: 526 HVLGVE--DRSPFWNFGHVARGDFVPTLYNNMLRAPIFKNEMKNTDFLLVRSQGAGSHQK 583
Query: 769 ISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVD 828
+R I+ + V P+MEV +P S+ + S NR+ + V+R +A + I V
Sbjct: 584 YYLRGINHMFAVGNIFPVMEVPAPHSRKVTNASKNRLRMIVFRSMNANDES----RISVK 639
Query: 829 ELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSY 888
++S FP+ ++ R++LKE R G + W +K+T +PSE D+R + PE V
Sbjct: 640 DISHHFPDQNDMQNRQRLKEFMEYNRTGEDQGFWKIKKTDSVPSEEDIRAMLTPEDVTLL 699
Query: 889 ESMQAGLYRLKHLGIT---------QLTLPASISSAMSQLPDEAIALAAASHIERELQIT 939
++MQ G L + + + + + ++
Sbjct: 700 DAMQHGNQMLDDIFYIFGDETKEDRRANKRKKDEDEEEEADKSKKDNKEKEIEDIDEELA 759
Query: 940 PWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSS--AMVKKKAA 997
PWN + NF+ +NQ + L++ G GDP+G GLGFS++R K+ + A VK+
Sbjct: 760 PWNATRNFL-ISNQTK---SMLQLNGEGDPTGIGLGFSFLRCTQKSGFTPLFAPVKENVP 815
Query: 998 ANRGGS 1003
N S
Sbjct: 816 KNSTAS 821
>gi|146418832|ref|XP_001485381.1| hypothetical protein PGUG_03110 [Meyerozyma guilliermondii ATCC 6260]
Length = 1056
Score = 151 bits (381), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 113/366 (30%), Positives = 176/366 (48%), Gaps = 31/366 (8%)
Query: 656 KKSDLSVKDGHVFL-MEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLG 714
K SDL+ D L +EY E+ P +LSN GMG+ + YY+K D A G
Sbjct: 469 KTSDLTNADTSSLLALEYSEQYPPILSNFGMGSKIINYYRKEKDDDNARPKAPIGET--- 525
Query: 715 NVLTLEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRS----AKGK 768
+VL +E D+SPF G + G +L NM RAP+F +++ TDFLLVRS + K
Sbjct: 526 HVLGVE--DRSPFWNFGHVARGDFVPTLYNNMLRAPIFKNEMKNTDFLLVRSQGAGSHQK 583
Query: 769 ISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVD 828
+R I+ + V P+MEV +P S+ + S NR+ + V+R +A + I V
Sbjct: 584 YYLRGINHMFAVGNIFPVMEVPAPHSRKVTNASKNRLRMIVFRSMNANDES----RISVK 639
Query: 829 ELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSY 888
++S FP+ ++ R++LKE R G + W +K+T +PSE D+R + PE V
Sbjct: 640 DISHHFPDQNDMQNRQRLKEFMEYNRTGEDQGFWKIKKTDSVPSEEDIRAMLTPEDVTLL 699
Query: 889 ESMQAGLYRLKHLGIT---------QLTLPASISSAMSQLPDEAIALAAASHIERELQIT 939
++MQ G L + + + + + ++
Sbjct: 700 DAMQHGNQMLDDIFYIFGDETKEDRRANKRKKDEDEEEEADKSKKDNKEKEIEDIDEELA 759
Query: 940 PWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSS--AMVKKKAA 997
PWN + NF+ +NQ + L++ G GDP+G GLGFS++R K+ + A VK+
Sbjct: 760 PWNATRNFL-ISNQTK---SMLQLNGEGDPTGIGLGFSFLRCTQKSGFTPLFAPVKENVP 815
Query: 998 ANRGGS 1003
N S
Sbjct: 816 KNSTAS 821
>gi|358060912|dbj|GAA93428.1| hypothetical protein E5Q_00069 [Mixia osmundae IAM 14324]
Length = 1133
Score = 151 bits (381), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 110/338 (32%), Positives = 166/338 (49%), Gaps = 32/338 (9%)
Query: 653 AFKKKSDLSVKDGHVF-LMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNN 711
A SDLS++D F L+E+ EE P ++SN GMG L YY+K D A A + N
Sbjct: 494 ALHTTSDLSLRDTSEFILLEFSEEHPPIMSNYGMGTLLVNYYRKR---DTADAHVP--NA 548
Query: 712 CLGNVLTLEPGDKSPFL--GDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSA---K 766
LG L+ D SPF+ GD+K G + + L N+ RAPV+ H A TDFL++R +
Sbjct: 549 PLGQPFILDGADDSPFMRFGDVKPGQTVTGLYNNLLRAPVYKHAPAHTDFLVIRHTVQNE 608
Query: 767 GKISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIG 826
K IR I + V Q P V P ++ L T S + + + +A +K
Sbjct: 609 SKYFIRAIKNIFTVGQILPAALVPPPQARAL-TISYKQRFQYLASKLAANSKHHQF---K 664
Query: 827 VDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVC 886
+++V FP+ +E ++ +LKE R GN W++K + + + RKL PE
Sbjct: 665 TQKIAVFFPDQTETQVKGRLKEFMDSTRSGNKAGHWTLKASHKPMEDAEFRKLHTPEQHA 724
Query: 887 SYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSN 946
E+MQ G +HL + S S+LP+ A S ++ E Q+ PWN + N
Sbjct: 725 LAEAMQVG---QQHL----------LDSGYSKLPEVDDEDADESKLDVEQQLAPWNTTKN 771
Query: 947 FVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPK 984
F + L++ G GDP+GR GFS+++ + K
Sbjct: 772 FQLAAQKK----AMLQLFGPGDPTGRSEGFSFLKVSMK 805
>gi|213408513|ref|XP_002175027.1| transcription initiation factor TFIID subunit 1
[Schizosaccharomyces japonicus yFS275]
gi|212003074|gb|EEB08734.1| transcription initiation factor TFIID subunit 1
[Schizosaccharomyces japonicus yFS275]
Length = 984
Score = 150 bits (380), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 100/330 (30%), Positives = 164/330 (49%), Gaps = 32/330 (9%)
Query: 666 HVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLTLEPGDKS 725
+ +E+ EE P +LSN GM + + YY+K + D++ L +G L+ D+S
Sbjct: 468 YSICVEFSEEHPPVLSNIGMASRIVNYYRKKNEQDESRPKLE-----VGETHVLDVQDRS 522
Query: 726 PF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKG---KISIRRIDKVAVV 780
PF G ++ G +L M RAP+F HKV TDF+L+R++ K ++ I+ V
Sbjct: 523 PFWNFGTVEPGEITPTLYNKMLRAPLFRHKVNETDFILIRNSNSQGCKYYLKNINYVFCC 582
Query: 781 AQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLSEA 840
Q P+ +V P S+ + T S +R+ + V+R + GL + +LS F + +E
Sbjct: 583 GQTFPVTDVPGPHSRKVTTASKHRLKMLVFRLIRRSPNDGLF----IRQLSKHFSDQNEM 638
Query: 841 IIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRLKH 900
IR++LKE ++ G+G W +K +P E R + PE VC ESMQ G+ +L+
Sbjct: 639 QIRQRLKEFMEYQKKGDGPGYWKLKPNEVVPEEEGTRSMVSPETVCLLESMQVGVRQLED 698
Query: 901 LGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENIER 960
G + TL +++ DE ++ E + PW + NF+ T +
Sbjct: 699 AGYGK-TL-----DELNEDDDEGMST--------EQLLAPWITTRNFINAT----QGKAM 740
Query: 961 LEITGVGDPSGRGLGFSYVRAAPKASVSSA 990
L + G GDP+G G G+S++R + K A
Sbjct: 741 LTLYGEGDPTGIGEGYSFIRTSMKGGFKPA 770
>gi|346319825|gb|EGX89426.1| transcription factor TFIID complex 145 kDa subunit [Cordyceps
militaris CM01]
Length = 1134
Score = 150 bits (380), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 106/360 (29%), Positives = 164/360 (45%), Gaps = 35/360 (9%)
Query: 654 FKKKSDLSVKDGHV-FLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNC 712
F K DL++ D L EYCE RP +L+N GMG L YY++ D+
Sbjct: 530 FLKSKDLTLGDNSTAVLFEYCEPRPRVLNNFGMGTKLINYYRRKDEKDEEQLPKLE---- 585
Query: 713 LGNVLTLEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKG--- 767
LG TL P D+SPF G + AG + +L MYRAPVF H T DFL+VR+ G
Sbjct: 586 LGEYRTLLPEDRSPFSLFGTVDAGETVPTLHNEMYRAPVFKHIPRTNDFLVVRNTTGVEG 645
Query: 768 -KISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIG 826
+ + +ID + V Q P +EV P S+ + S NRM + +R +
Sbjct: 646 SRWYLHKIDHIHAVGQAFPSVEVPGPHSRKVTNASKNRMKMLAFRMI----RHSRTDNCQ 701
Query: 827 VDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVC 886
+ E++ + ++ R+KLKE RD K +W ++ +P E +R + PE V
Sbjct: 702 LSEMTRHIADSTDTQNRQKLKEFLQYDRDSGEKGMWRLRPGEVLPDENAIRAMIKPEDVS 761
Query: 887 SYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIEREL---------- 936
++MQ G+ L+ G + ++ +E +S I +
Sbjct: 762 LLDAMQLGIKELEDAGYDPRNANIEDETQAAEEGEEEDGEDDSSKITKAAAKKAQEKQEE 821
Query: 937 ----QITPWNLSSNFV-ACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAM 991
++ PW + F+ AC + L++ G GDP+G GLGFS++R + K A+
Sbjct: 822 TLADKMAPWKTTKAFIDACAQK-----AMLQLHGEGDPTGHGLGFSFIRTSMKGGYIEAV 876
>gi|366994570|ref|XP_003677049.1| hypothetical protein NCAS_0F02100 [Naumovozyma castellii CBS 4309]
gi|342302917|emb|CCC70694.1| hypothetical protein NCAS_0F02100 [Naumovozyma castellii CBS 4309]
Length = 1069
Score = 150 bits (379), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 114/388 (29%), Positives = 175/388 (45%), Gaps = 50/388 (12%)
Query: 611 HKSLADQNVRPNSLIHLIRTKIHLLPRAQKLPGENKSLRPPGAFKKKSDLSVKD-GHVFL 669
H+ N+R + I + K+ R +K +F DL++ D V+L
Sbjct: 494 HRPHFGSNIRSGTTITFNKLKLRKRKR-------DKGKEVKESFASTQDLTIGDTAPVYL 546
Query: 670 MEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLTLEPGDKSPF-- 727
MEY E+ PL LS GM L YY+K+S D L +G L DKSPF
Sbjct: 547 MEYSEQTPLALSKFGMATKLINYYRKTSDQDTLRPKLP-----VGETHVLGVQDKSPFWN 601
Query: 728 LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKIS----IRRIDKVAVVAQQ 783
G ++ G +L NM RAPVF H ++ TDFL+V+S+ +S ++ I+ + V Q
Sbjct: 602 FGFVEPGHIVPTLYNNMVRAPVFKHDISGTDFLMVKSSGHGVSSRFYLKNINHLFTVGQT 661
Query: 784 EPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLSEAIIR 843
P+ E+ P S+ + + R+ + VYR + + R I ++ ++ FP+ R
Sbjct: 662 FPVEEIPGPNSRKVTSMRTTRLRMIVYRILNRTSSR----AISIEPVNKHFPDQDYGQNR 717
Query: 844 KKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRLKHLGI 903
+K+KE +RDG K +W +K + RKL PE V ESM GL
Sbjct: 718 QKVKEFMKYQRDGPDKGLWKLKDGEQLLDNESTRKLITPEQVSEAESMSQGL-------- 769
Query: 904 TQLTLPASISSAMSQLPDEAIALAA-ASHIERELQITPWNLSSNFVACTNQDRENIERLE 962
Q D+ ++ E + PWN + NF+ T Q R I+
Sbjct: 770 --------------QFHDDNEFFNFDEKLLKLEENLLPWNATKNFINAT-QMRAMIQ--- 811
Query: 963 ITGVGDPSGRGLGFSYVRAAPKASVSSA 990
I G GDP+G G GFS+++ + K + +
Sbjct: 812 IHGAGDPTGCGEGFSFLKTSMKGGFTKS 839
>gi|361126064|gb|EHK98080.1| putative transcription initiation factor TFIID kDa subunit [Glarea
lozoyensis 74030]
Length = 953
Score = 150 bits (379), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 124/431 (28%), Positives = 194/431 (45%), Gaps = 65/431 (15%)
Query: 595 PAESVKLFYLGKEL--EDHKSLADQNVRPNSLIHLIRTKIHLLPRAQKLPGENKSLRPPG 652
PA ++ Y +L +D +SL +++ +I++ T L R +K + K+L
Sbjct: 432 PALRLQWPYYRTKLSSKDARSLHRPSLKFTKIINIPITFSKPLMRKKK---QVKNLGVQE 488
Query: 653 AFKKKSDLSVKDGHV--FLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGN 710
FK+ DL++ D + L EY EE P++LS GMG + YY++ D ++ +
Sbjct: 489 LFKETKDLTLADHYASATLFEYSEESPIILSGFGMGNRVINYYRRKDTEDTDRPII---D 545
Query: 711 NCLGNVLTLEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKG- 767
+ +G+V L P D+SPF G++ G + +L M+RAP+F H+ +TDFL++RS G
Sbjct: 546 DKIGDVTPLLPEDRSPFANFGEVAPGETVRTLHNTMFRAPIFKHETKSTDFLVIRSTTGV 605
Query: 768 ---KISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPC 824
IR ID V V Q P ME+ P S+
Sbjct: 606 GGINWFIRNIDNVFAVGQLFPSMEIPGPHSRR---------------------------T 638
Query: 825 IGVDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEH 884
+ + +++ + S+ R+KLKE F D K VW MK +P E +R L PE
Sbjct: 639 LKIGDVTAHILDSSDMQNRQKLKE--FFVYDKTEK-VWKMKANEVLPEESAIRALIKPEE 695
Query: 885 VCSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLS 944
VC+ +M+ G LK G + +E H+E+ L PW S
Sbjct: 696 VCALHAMEVGAQHLKDAGFEVTEDKDKDKDKKDKDNEEEDEPGTEGHLEKSL--APWRTS 753
Query: 945 SNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAA-----------PKASVSSAMVK 993
F+ ++ L++ G GDPSG GL FS +R + P A+ +AM +
Sbjct: 754 KAFLDASS----GKAMLKLHGEGDPSGNGLAFSMIRTSMKGGYIGALQGPSATSDAAMNQ 809
Query: 994 KKAAANRGGST 1004
+K A GG T
Sbjct: 810 QKKA--NGGHT 818
>gi|358367122|dbj|GAA83741.1| transcription factor TFIID complex 145 kDa subunit [Aspergillus
kawachii IFO 4308]
Length = 1123
Score = 150 bits (379), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 103/337 (30%), Positives = 161/337 (47%), Gaps = 26/337 (7%)
Query: 660 LSVKDG-HVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLT 718
LS+ D +V L+EY EE PL+LSN GM + YY++ S D +G
Sbjct: 551 LSLADNSNVLLVEYSEEVPLVLSNFGMSNRIINYYRRKSMEDP-----TRPKAEIGETAV 605
Query: 719 LEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGK----ISIR 772
L P DKSPF G + G ++ +MYRAP+F H+ TDFL+VRS+ G IR
Sbjct: 606 LLPQDKSPFSIFGHVDPGEVTPAISNSMYRAPLFVHEAKKTDFLIVRSSTGSGGSDYYIR 665
Query: 773 RIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSV 832
I+ + V QQ P +++ P S+ + T + NRM + VYR + L + +++
Sbjct: 666 NIENLYVAGQQFPSVDIPGPHSRKVTTVAKNRMKMLVYRLLKKSPDLRL----SISDVTA 721
Query: 833 QFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQ 892
P S+ R+K+K+ FL+ D + K M+ +P + +R PE VC ESMQ
Sbjct: 722 HIPGTSDMQNRQKVKD--FLQHDKDSKYWVPME---PVPEQDVIRSWVQPEDVCLLESMQ 776
Query: 893 AGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTN 952
G L G + + + ++ E Q+ PW + NF+ +
Sbjct: 777 VGQQHLHDTGFGN-DAEKTGNEGEKKEREDEDRDGDEEGESFEQQMAPWKATRNFLLAS- 834
Query: 953 QDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSS 989
+ L++ G GDP+GRG GFS+++ + K +
Sbjct: 835 ---QGKAMLKLHGEGDPTGRGEGFSFIKTSMKGGFKA 868
>gi|50303001|ref|XP_451438.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49640569|emb|CAH03026.1| KLLA0A10021p [Kluyveromyces lactis]
Length = 1033
Score = 150 bits (379), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 109/341 (31%), Positives = 169/341 (49%), Gaps = 45/341 (13%)
Query: 654 FKKKSDLSVKD-GHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNC 712
F+ +DL+V D VFLMEY E++P+ LS GM L YY+K+ D + L G
Sbjct: 479 FQHSADLTVGDSAQVFLMEYSEQQPVALSKFGMANKLINYYRKTGETDSSRPKLPVGET- 537
Query: 713 LGNVLTLEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRS----AK 766
+VL ++ DKSPF G + G +L NM RAPVF H+V+ TDFLLV+S +
Sbjct: 538 --HVLGVQ--DKSPFWNFGFVSPGNIVPTLYNNMVRAPVFKHEVSKTDFLLVKSLGNGSG 593
Query: 767 GKISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIG 826
+ +R+I+ + V Q P++EV P S+ + NR+ + VYR + + + LL
Sbjct: 594 NRFYLRQINHLFAVGQTFPVVEVPGPNSRKVTAMGKNRLRMVVYRILNKSPENRLL---- 649
Query: 827 VDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVC 886
V +++ FP ++ R++LKE +R+G+ + W +K + +++K+ PE V
Sbjct: 650 VKQVARHFPEQNDMQNRQRLKEFMKYQREGDDQGFWKLKEGEVLLDNENVKKMVTPEDVS 709
Query: 887 SYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQ--ITPWNLS 944
ESM G Q E I +EL+ + WN +
Sbjct: 710 LVESMYYG-----------------------QQFQEDIDFYNFDERAKELEENLIFWNAT 746
Query: 945 SNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKA 985
NF+ T Q R I +I G GDP+G G GFS+++ + K
Sbjct: 747 KNFLNAT-QMRAMI---QIHGPGDPTGCGEGFSFLKTSMKG 783
>gi|358387829|gb|EHK25423.1| hypothetical protein TRIVIDRAFT_31816 [Trichoderma virens Gv29-8]
Length = 1145
Score = 150 bits (378), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 117/381 (30%), Positives = 175/381 (45%), Gaps = 54/381 (14%)
Query: 654 FKKKSDLSVKDGHV-FLMEYCEERPLLLSNAGMGANLCTYYQK---SSPGDQAGALLCSG 709
F K DLS+ D L EYCE RP +L++ MG+ L YY++ SS DQ L
Sbjct: 512 FLKSKDLSLCDNSAAVLFEYCEPRPRVLNSFAMGSRLINYYRRKENSSEEDQLAKLE--- 568
Query: 710 NNCLGNVLTLEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKG 767
LG TL P D+SPF G + G +L MYRAPVF H TDFL+VRS G
Sbjct: 569 ---LGEYRTLLPEDRSPFSLFGTVDPGEVVPTLHNEMYRAPVFKHTPRNTDFLIVRSTTG 625
Query: 768 ----KISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLP 823
K I +ID + VV Q P ++V P S+ + S +RM + +R +
Sbjct: 626 IGGPKWYIHKIDHLHVVGQTFPSVDVPGPHSRRVTNASKSRMKMLAFRMIRHSRSDN--- 682
Query: 824 CIGVDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPE 883
C + +++ + ++ R+KLKE RD K +W +K +P E +R + PE
Sbjct: 683 C-QLSDITKHIADSTDTQNRQKLKEFLQYDRDSKEKGMWRLKPGEILPDENAIRAMIKPE 741
Query: 884 HVCSYESMQAGLYRLKHLGITQLTLPASI---------------SSAMSQLPDEAIALAA 928
VC ++MQ G+ L+ G A+I S++ + +A
Sbjct: 742 EVCLLDAMQLGIKELEDAGYDPRN--ATIDDDAQGLDADEDDDDDGEGSKIVKGSKKVAE 799
Query: 929 ASHIERELQITPWNLSSNFV-ACTNQDRENIERLEITGVGDPSGRGLGFSYVRAA----- 982
++ PW + F+ AC + L++ G GDP+G GLGFS++R +
Sbjct: 800 KQEETLADKMAPWKTTKAFIDACAQK-----AMLQLHGEGDPTGHGLGFSFIRTSMKGGY 854
Query: 983 ------PKASVSSAMVKKKAA 997
P A+ + AM ++K A
Sbjct: 855 IEAVQGPLATSADAMEREKRA 875
>gi|350631323|gb|EHA19694.1| hypothetical protein ASPNIDRAFT_39117 [Aspergillus niger ATCC 1015]
Length = 1122
Score = 150 bits (378), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 103/338 (30%), Positives = 161/338 (47%), Gaps = 26/338 (7%)
Query: 660 LSVKDG-HVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLT 718
LS+ D +V L+EY EE PL+LSN GM + YY++ S D +G
Sbjct: 551 LSLADNSNVLLVEYSEEVPLVLSNFGMSNRIINYYRRKSMEDP-----TRPKAEIGETAV 605
Query: 719 LEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGK----ISIR 772
L P DKSPF G + G ++ +MYRAP+F H+ TDFL+VRS+ G IR
Sbjct: 606 LLPQDKSPFSIFGHVDPGEVTPAISNSMYRAPLFVHEAKKTDFLIVRSSTGSGGSDYYIR 665
Query: 773 RIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSV 832
I+ + V QQ P +++ P S+ + T + NRM + VYR + L + +++
Sbjct: 666 NIENLYVAGQQFPSVDIPGPHSRKVTTVAKNRMKMLVYRLLKKSPDLRL----SISDVTA 721
Query: 833 QFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQ 892
P S+ R+K+K+ FL+ D + K M+ +P + +R PE VC ESMQ
Sbjct: 722 HIPGTSDMQNRQKVKD--FLQHDKDSKYWVPME---PVPEQDVIRSWVQPEDVCLLESMQ 776
Query: 893 AGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTN 952
G L G + + + ++ E Q+ PW + NF+ +
Sbjct: 777 VGQQHLHDTGFGN-DAEKTGNEGEKKEREDEDRDNDEEGESFEQQMAPWKATRNFLLAS- 834
Query: 953 QDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSA 990
+ L++ G GDP+GRG GFS+++ + K +
Sbjct: 835 ---QGKAMLKLHGEGDPTGRGEGFSFIKTSMKGGFKAV 869
>gi|134079227|emb|CAK40710.1| unnamed protein product [Aspergillus niger]
Length = 1103
Score = 150 bits (378), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 103/338 (30%), Positives = 161/338 (47%), Gaps = 26/338 (7%)
Query: 660 LSVKDG-HVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLT 718
LS+ D +V L+EY EE PL+LSN GM + YY++ S D +G
Sbjct: 551 LSLADNSNVLLVEYSEEVPLVLSNFGMSNRIINYYRRKSMEDP-----TRPKAEIGETAV 605
Query: 719 LEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGK----ISIR 772
L P DKSPF G + G ++ +MYRAP+F H+ TDFL+VRS+ G IR
Sbjct: 606 LLPQDKSPFSIFGHVDPGEVTPAISNSMYRAPLFVHEAKKTDFLIVRSSTGSGGSDYYIR 665
Query: 773 RIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSV 832
I+ + V QQ P +++ P S+ + T + NRM + VYR + L + +++
Sbjct: 666 NIENLYVAGQQFPSVDIPGPHSRKVTTVAKNRMKMLVYRLLKKSPDLRL----SISDVTA 721
Query: 833 QFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQ 892
P S+ R+K+K+ FL+ D + K M+ +P + +R PE VC ESMQ
Sbjct: 722 HIPGTSDMQNRQKVKD--FLQHDKDSKYWVPME---PVPEQDVIRSWVQPEDVCLLESMQ 776
Query: 893 AGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTN 952
G L G + + + ++ E Q+ PW + NF+ +
Sbjct: 777 VGQQHLHDTGFGN-DAEKTGNEGEKKEREDEDRDNDEEGESFEQQMAPWKATRNFLLAS- 834
Query: 953 QDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSA 990
+ L++ G GDP+GRG GFS+++ + K +
Sbjct: 835 ---QGKAMLKLHGEGDPTGRGEGFSFIKTSMKGGFKAV 869
>gi|358390362|gb|EHK39768.1| hypothetical protein TRIATDRAFT_209520 [Trichoderma atroviride IMI
206040]
Length = 1117
Score = 150 bits (378), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 120/410 (29%), Positives = 186/410 (45%), Gaps = 55/410 (13%)
Query: 623 SLIHLIRTKIHLLPRAQKLPGENKSLRPPGAFKKKSDLSVKDGHV-FLMEYCEERPLLLS 681
S+ H +R + L + +++ G+ + F K DLS+ D L EYCE RP +L+
Sbjct: 486 SVGHTVRFEKPLHFKRKQMKGKAHEI-----FLKSRDLSLCDNSAAVLFEYCEPRPRVLN 540
Query: 682 NAGMGANLCTYYQK---SSPGDQAGALLCSGNNCLGNVLTLEPGDKSPF--LGDIKAGCS 736
MG+ L YY++ S+ DQ L LG TL P D+SPF G + G
Sbjct: 541 GFAMGSRLINYYRRKENSNEEDQLTKLE------LGEYRTLLPEDRSPFSLFGTVDPGEV 594
Query: 737 QSSLETNMYRAPVFTHKVATTDFLLVRSAKG----KISIRRIDKVAVVAQQEPLMEVMSP 792
+L MYRAPVF H TDFL+VRS G K I +ID + VV Q P ++V P
Sbjct: 595 VPTLHNEMYRAPVFKHTPRNTDFLIVRSTTGIGGAKWYIHKIDHMHVVGQTFPSVDVPGP 654
Query: 793 GSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLSEAIIRKKLKECAFL 852
S+ + S +RM + +R + C + +++ ++ R+KLKE
Sbjct: 655 HSRRVTNASKSRMKMLAFRMIRHSRSDN---C-QLSDITKHIAESTDTQNRQKLKEFLQY 710
Query: 853 RRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRLKHLGI--------- 903
RD K +W +K +P E +R + PE VC ++MQ G+ L+ G
Sbjct: 711 DRDSKEKGMWRLKPGEILPDENAIRAMIKPEEVCLLDAMQLGIKELEDAGYDPRNATIDD 770
Query: 904 ----TQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFV-ACTNQDRENI 958
++ S++ A +A ++ PW + F+ AC +
Sbjct: 771 EAQGVEVDDDEDDDGEGSKIVKGAKKIAEKQEETLADKMAPWKTTKAFIDACAQK----- 825
Query: 959 ERLEITGVGDPSGRGLGFSYVRAA-----------PKASVSSAMVKKKAA 997
L++ G GDP+G GLGFS++R + P A+ + AM ++K A
Sbjct: 826 AMLQLHGEGDPTGHGLGFSFIRTSMKGGYIEAVQGPLATSADAMEREKRA 875
>gi|378733439|gb|EHY59898.1| transcription initiation factor TFIID subunit D1 [Exophiala
dermatitidis NIH/UT8656]
Length = 1123
Score = 149 bits (377), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 104/339 (30%), Positives = 163/339 (48%), Gaps = 37/339 (10%)
Query: 654 FKKKSDLSVKDGH-VFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNC 712
+K SD+S+ D + L+EY EE PL+LS GMG + YY++ + D + +
Sbjct: 542 YKNTSDISMADNSSMLLLEYSEEHPLMLSQTGMGNKVVNYYRRRAKDDTS-----RPKSN 596
Query: 713 LGNVLTLEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKIS 770
+G L P DKSPF G I G + ++L +MYRAP+F TDFL++R G
Sbjct: 597 IGETSVLLPEDKSPFYIFGQIDPGETITALYNSMYRAPIFPQDPKPTDFLVIRQTTGTTG 656
Query: 771 ----IRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIG 826
+R I+ + V Q+ P +V S+ + T + NR+ +R A+R +
Sbjct: 657 QTHYLRNIENLYVAGQELPSAQVPGTHSRAVTTAAKNRLKAISFR----IARRKKHNRLK 712
Query: 827 VDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVC 886
V+E++ FP+ ++ R+K+KE ++ + W MK +P E +R L PE +C
Sbjct: 713 VEEVTRHFPDTTDMQNRQKMKEFMVFNKE---HKEWEMKPGETVPDEDAIRNLIKPEDIC 769
Query: 887 SYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSN 946
ESMQ G L+ + D+ A IE+ Q+ PW + N
Sbjct: 770 LLESMQVGAQYLQ------------DAGYADNDDDDDKAENDNDSIEQ--QLAPWRTTKN 815
Query: 947 FVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKA 985
F+A T + L + G GDPSGRG FS+++ + K
Sbjct: 816 FLAAT----QGKAMLRLYGEGDPSGRGEAFSFIKTSMKG 850
>gi|145489376|ref|XP_001430690.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124397790|emb|CAK63292.1| unnamed protein product [Paramecium tetraurelia]
Length = 1262
Score = 149 bits (377), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 128/449 (28%), Positives = 207/449 (46%), Gaps = 70/449 (15%)
Query: 654 FKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSP------------GD- 700
+K+ +LS+ G+ LMEY E+RPLLL+N GM + + Y S GD
Sbjct: 687 YKQIDNLSLSKGNFILMEYIEQRPLLLNNTGMCSKVTRYVYSSRALQQFNQKRIKDEGDN 746
Query: 701 ----QAGALLCSGNNCLG----------------NVLT--LEPGDKSPFLGDI--KAGCS 736
Q ++ + + G N+L L+ P G + +
Sbjct: 747 YNNFQENSVQANYRSTYGQMGQITNEEMALWEFKNMLIRFLDKNQAIPLQGQLTDERFIG 806
Query: 737 QSSLETNMYRAPVFTHKVATTDFLLVRS----AKGKISIRRIDKVAVVAQQEPLMEVMSP 792
+ +E ++YRAP+F K+ TDFLLVR+ K ++R ID + +V Q EP +E+ +P
Sbjct: 807 IAVIENDLYRAPIFKQKLPVTDFLLVRTRVDNCHYKYTLRPIDCIYLVGQIEPKVEIFTP 866
Query: 793 GSKNLQTYSINRMLVNVYREFSAA--AKRGLLPCIGVDELSVQFPNLSEAIIRKKLKECA 850
S+ L T+ N + + ++F K+ L I + Q S A IR LKEC
Sbjct: 867 QSRPLGTFLKNCLKTYIKKQFKMGLEVKQDELELIFQKQNQKQSQKQSHAYIRSALKECK 926
Query: 851 FLRRDGNGKQVWSMKRTFHIPSEGDLRKLAY---PEHVCSYESMQAGLYRLKHLGITQL- 906
+ +D + ++ W ++ D++ L Y VC YESM Y L+ G+ +L
Sbjct: 927 GI-QDSSNQKTWRYQKG----GNDDIQILKYDITANQVCLYESMLHSSYLLQEFGLRELK 981
Query: 907 ---TLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENIERLEI 963
+ ++ +S+ P + + A +E EL +T W+LS +F+ NQ R+ +
Sbjct: 982 NSDKMKKTLQEYLSRNPQDFNSWVIARRVEDELNMTAWSLSQSFLNSANQ----TGRMLL 1037
Query: 964 TGVGDP-SGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLRRLSMEAARE 1022
G+GDP SG G G +Y++ KA K + A +V GT+ DLR+L +E +
Sbjct: 1038 YGIGDPTSGHG-GLNYIKKPLKARGE----KGQNAIQEKKPSVMGTENDLRKLHVEDIQN 1092
Query: 1023 VLLKFNVPEEMIAKQTRWHRIAMIRKLSS 1051
+ K + E K RW MI KL++
Sbjct: 1093 ISSKLGLTTEPNLK--RW---KMINKLTA 1116
>gi|121699693|ref|XP_001268112.1| transcription factor TFIID complex 145 kDa subunit, putative
[Aspergillus clavatus NRRL 1]
gi|119396254|gb|EAW06686.1| transcription factor TFIID complex 145 kDa subunit, putative
[Aspergillus clavatus NRRL 1]
Length = 1113
Score = 149 bits (377), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 104/337 (30%), Positives = 160/337 (47%), Gaps = 37/337 (10%)
Query: 660 LSVKDG-HVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLT 718
LS+ D +V L+EY EE PL+LSN GM YY++ S D +G +
Sbjct: 548 LSLADNSNVLLVEYSEESPLMLSNFGMSNRFINYYRRKSMEDS-----TRPKADIGETVV 602
Query: 719 LEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGK----ISIR 772
L P DKSPF G + G ++ +MYRAP+F H+ +TDFL+VRS+ G +R
Sbjct: 603 LLPQDKSPFSIFGHVDPGEITPTVSNSMYRAPLFQHQARSTDFLIVRSSTGSGGSDYYLR 662
Query: 773 RIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSV 832
I+ + V QQ P ++V P S+ + T + NRM + VYR + L + +++
Sbjct: 663 NIENLYVAGQQFPSVDVPGPHSRKVTTVAKNRMKMLVYRLLKKSPDLRL----SISDVTA 718
Query: 833 QFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQ 892
P S+ R+K+K+ FL+ D + K ++ +P +R PE VC E+MQ
Sbjct: 719 HIPGTSDMQNRQKVKD--FLQHDKDSKYWVPLE---PVPESDTIRSWVQPEDVCLLEAMQ 773
Query: 893 AGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTN 952
G L G + DE H E Q+ PW + NF+ +
Sbjct: 774 VGQQHLHDTGYGN-------DAETGGDEDE-----DGEHESFEQQMAPWKATRNFLLAS- 820
Query: 953 QDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSS 989
+ L++ G GDP+GRG GFS+++ + K +
Sbjct: 821 ---QGKAMLKLHGEGDPTGRGEGFSFIKTSMKGGFKA 854
>gi|428184639|gb|EKX53494.1| hypothetical protein GUITHDRAFT_101192 [Guillardia theta CCMP2712]
Length = 1293
Score = 149 bits (377), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 100/316 (31%), Positives = 161/316 (50%), Gaps = 26/316 (8%)
Query: 653 AFKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNC 712
A KK D++ D L+EY E+ P ++SN GM + + YY+ S D + S +
Sbjct: 627 ALKKMRDVTCSDSKALLVEYYEQIPPVVSNVGMASRIRHYYR--SRNDAPAPSIPSEHLN 684
Query: 713 LGNVLTLEPGDKSPFLGDIKAGCSQ--SSLETNMYRAPVFTHKVATTDFLLVRSAKGKIS 770
G + L+ +SPF GDI G + S+LE NM RAP+ H+ TDFL+V++ K
Sbjct: 685 DGKPVGLDVQQESPFYGDIPEGANSFVSALENNMQRAPIAKHEPHPTDFLVVKNG-DKFF 743
Query: 771 IRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDEL 830
++ ID + Q P ++V +P SK Y ++ +Y G+L E+
Sbjct: 744 LKPIDSLYCAGQCHPFVKVPAPNSKEQAAYQKRHLINFIYGRLKGG---GIL---HTHEV 797
Query: 831 SVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLA-YPEHVCSYE 889
+F SE IRK+LK+CA R+G W++K F IP D+ +++ PE+VC +E
Sbjct: 798 FDEFKATSETAIRKQLKDCAQFNREGGEGGHWTLKEGFEIPK--DVMEISDTPENVCLFE 855
Query: 890 SMQAGLYRLKHLGITQLTLPASISSAMSQL----------PDEAIAL--AAASHIERELQ 937
S+QAG RL++LGI + I+S++ + D + L AA + +
Sbjct: 856 SLQAGQMRLRNLGIKTVQKADEIASSVQDIVKDKSFAESTADNDVKLIPTAAQCVLELVS 915
Query: 938 ITPWNLSSNFVACTNQ 953
+ PWN+S++FV ++
Sbjct: 916 LAPWNVSNSFVNSSDH 931
>gi|403215903|emb|CCK70401.1| hypothetical protein KNAG_0E01350 [Kazachstania naganishii CBS
8797]
Length = 1134
Score = 149 bits (376), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 107/340 (31%), Positives = 164/340 (48%), Gaps = 41/340 (12%)
Query: 653 AFKKKSDLSVKD-GHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNN 711
+F DL+V D V+LMEY E+ PL LS GM L YY+K+S D L G
Sbjct: 551 SFGTSQDLTVGDTAPVYLMEYSEQTPLALSKFGMANKLINYYRKTSEEDTLRPKLSVGET 610
Query: 712 CLGNVLTLEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSA---- 765
+VL ++ DKSPF G ++ G +L NM RAPVF H+V+ TDFL+VRS
Sbjct: 611 ---HVLGVQ--DKSPFWNFGFVEPGHIVPTLYNNMIRAPVFKHEVSGTDFLMVRSTGHGV 665
Query: 766 KGKISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCI 825
+ +R I+ + V Q P+ E+ P S+ + + R+ + VYR + R I
Sbjct: 666 NSRFFLRNINHLFTVGQTLPVEEIPGPNSRKVTSMRATRLRMIVYRILNRVPAR----AI 721
Query: 826 GVDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHV 885
++ ++ FP+ R+K+KE +RDG K +W +K + + +KL PE +
Sbjct: 722 SIEPITKHFPDQDYGQNRQKIKEFMKYQRDGPDKGLWKLKEGEPLLDNENTKKLMSPEQI 781
Query: 886 CSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSS 945
ESM S A+ + D ++ E ++ PWN++
Sbjct: 782 SEVESM---------------------SHALQFMEDNENYNFDEKLLKLEEELLPWNITR 820
Query: 946 NFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKA 985
NF+ T Q R + +I G GDP+G G GFS+++ + K
Sbjct: 821 NFINST-QMRAMV---QIHGAGDPTGCGEGFSFLKTSMKG 856
>gi|403411375|emb|CCL98075.1| predicted protein [Fibroporia radiculosa]
Length = 1053
Score = 149 bits (376), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 122/443 (27%), Positives = 191/443 (43%), Gaps = 87/443 (19%)
Query: 656 KKSDLSVKDGHVFLM-EYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLG 714
+ DLS++D F++ E+ EE P ++SN GMG+ L YY+K S D+ LG
Sbjct: 417 RTGDLSLRDTSNFVLWEFSEEHPPIISNFGMGSILVNYYRKRSEKDE-----HVPKYDLG 471
Query: 715 NVLTLEPGDKSPFL--GDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSA---KGKI 769
+ +EP D+SPF+ G + G + +L +N+ RAP+F K TDFL++RS K
Sbjct: 472 EPIIIEPQDESPFMKFGYVYPGQTVPALYSNLIRAPLFRQKSYPTDFLVIRSTCKNDAKY 531
Query: 770 SIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDE 829
IR I + VV Q P+ EV P S+ + +R+ + ++ +A+ L +
Sbjct: 532 YIREIKNMFVVGQTYPVTEVPGPHSRKITNTIKHRLQIIAFKLLQKSAEERL----KISR 587
Query: 830 LSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYE 889
L FP+ +E +R++LK W +K + IPS+ D+ K+ PE V E
Sbjct: 588 LMKYFPDQNELQMRQRLKASPGF---------WRLKANWTIPSDVDMLKMVTPEQVVLSE 638
Query: 890 SMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVA 949
SMQ G L+ G + + +A ++ E Q+ PW + NF+
Sbjct: 639 SMQVGQRHLQDAGYSF---------------NGEVAEDDEGNLSVEQQLAPWITTKNFLF 683
Query: 950 CTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTD 1009
T L + G GDP+GRG FS++R S+ VK G D
Sbjct: 684 ATQAK----AMLRLHGDGDPTGRGEAFSFIR----VSMKDIFVK------------AGED 723
Query: 1010 ADLRRLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASGVQLQQQTRGKCQ 1069
+ E + ++NV E+ QQ + + +
Sbjct: 724 YGQKLAEAENRPKSAHRYNVAEQ----------------------------QQIYKSEIE 755
Query: 1070 EIWDRQVQSLSAADDDEIGSDSE 1092
IW Q SLS D+ E+ D E
Sbjct: 756 RIWKAQFDSLSRKDEPELSPDEE 778
>gi|336262968|ref|XP_003346266.1| hypothetical protein SMAC_05803 [Sordaria macrospora k-hell]
gi|380093595|emb|CCC08559.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1118
Score = 149 bits (376), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 105/367 (28%), Positives = 172/367 (46%), Gaps = 47/367 (12%)
Query: 654 FKKKSDLSVKDGHV-FLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNC 712
FK DLS+ D L EYCEE P +LSN GMG + Y++++ D G C
Sbjct: 527 FKSTHDLSLNDNSTAILFEYCEEIPTVLSNFGMGQKIINYFRRAKGADNRPEKRELGETC 586
Query: 713 LGNVLTLEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKIS 770
+ L P D+SPF G + G +L +M+RAP+F H TDFL+ RS+ G+
Sbjct: 587 I-----LMPEDRSPFAIFGHVHPGEVVPTLHNHMFRAPIFKHNPRNTDFLIGRSSTGQKG 641
Query: 771 ----IRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIG 826
IR ID + VV Q P MEV P S+ + + NR+ + YR + +
Sbjct: 642 STWYIRNIDHLYVVGQTLPSMEVPGPHSRRVTNIAKNRLKMVSYRLLRKSEH------VT 695
Query: 827 VDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVC 886
+ +++ +E+ R+KLKE R++ + W++ + +E +R L PE VC
Sbjct: 696 LHDITKHVAESNESQNRQKLKEFLRFRKE---TKDWALPEGEELMTEPAIRSLVRPEEVC 752
Query: 887 SYESMQAGLYRLKHLG--ITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLS 944
++MQ G++ ++ G T I +L +A+A ++ PW +
Sbjct: 753 LLDAMQVGIHEIEKGGYDTTDSLKDDDIVDVDDELSPDALA----------NKMAPWKTT 802
Query: 945 SNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKA----------SVSSAMVKK 994
F+ ++ L + G GDP+G+GLG S++R + K + S+ +++
Sbjct: 803 KAFLDASH----GKAMLAVHGAGDPTGKGLGISFLRTSMKGGYLEQLQGPMATSADAIER 858
Query: 995 KAAANRG 1001
+ AN G
Sbjct: 859 QRKANGG 865
>gi|317032307|ref|XP_001394539.2| trimethylguanosine synthase [Aspergillus niger CBS 513.88]
Length = 1112
Score = 149 bits (375), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 104/337 (30%), Positives = 161/337 (47%), Gaps = 37/337 (10%)
Query: 660 LSVKDG-HVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLT 718
LS+ D +V L+EY EE PL+LSN GM + YY++ S D +G
Sbjct: 551 LSLADNSNVLLVEYSEEVPLVLSNFGMSNRIINYYRRKSMEDP-----TRPKAEIGETAV 605
Query: 719 LEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGK----ISIR 772
L P DKSPF G + G ++ +MYRAP+F H+ TDFL+VRS+ G IR
Sbjct: 606 LLPQDKSPFSIFGHVDPGEVTPAISNSMYRAPLFVHEAKKTDFLIVRSSTGSGGSDYYIR 665
Query: 773 RIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSV 832
I+ + V QQ P +++ P S+ + T + NRM + VYR + L + +++
Sbjct: 666 NIENLYVAGQQFPSVDIPGPHSRKVTTVAKNRMKMLVYRLLKKSPDLRL----SISDVTA 721
Query: 833 QFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQ 892
P S+ R+K+K+ FL+ D + K M+ +P + +R PE VC ESMQ
Sbjct: 722 HIPGTSDMQNRQKVKD--FLQHDKDSKYWVPME---PVPEQDVIRSWVQPEDVCLLESMQ 776
Query: 893 AGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTN 952
G L G + + +E + E Q+ PW + NF+ +
Sbjct: 777 VGQQHLHDTGFGN----DAEKTGNEDNDEEGESF--------EQQMAPWKATRNFLLAS- 823
Query: 953 QDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSS 989
+ L++ G GDP+GRG GFS+++ + K +
Sbjct: 824 ---QGKAMLKLHGEGDPTGRGEGFSFIKTSMKGGFKA 857
>gi|67526899|ref|XP_661511.1| hypothetical protein AN3907.2 [Aspergillus nidulans FGSC A4]
gi|40740026|gb|EAA59216.1| hypothetical protein AN3907.2 [Aspergillus nidulans FGSC A4]
gi|259481522|tpe|CBF75121.1| TPA: transcription factor TFIID complex 145 kDa subunit, putative
(AFU_orthologue; AFUA_6G08600) [Aspergillus nidulans
FGSC A4]
Length = 1092
Score = 149 bits (375), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 103/333 (30%), Positives = 161/333 (48%), Gaps = 37/333 (11%)
Query: 660 LSVKDG-HVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLT 718
LS+ D HV L+EY EE PL LSN GM + YY+K + D +G
Sbjct: 540 LSMADNSHVLLVEYSEESPLTLSNFGMANRIINYYRKKNAEDP-----TRPKAEIGETAV 594
Query: 719 LEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGK----ISIR 772
L P DKSPF G + G ++ MYRAP+F+H+ +TDFL++R++ G IR
Sbjct: 595 LLPQDKSPFSIFGHVDPGEVTPAISNAMYRAPLFSHQPKSTDFLVIRNSTGSGGSDYYIR 654
Query: 773 RIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSV 832
ID + V QQ P +++ P S+ + T + NRM + VYR + L + +++
Sbjct: 655 NIDNIFVAGQQFPSVDIPGPHSRKVTTVAKNRMKMLVYRLLKKSPDLRL----SISDVTA 710
Query: 833 QFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQ 892
P S+ R+K+K+ FL+ D + K ++ +P + +R PE VC E+MQ
Sbjct: 711 HIPGTSDMQNRQKVKD--FLQHDKDTKYWVPLE---PVPEQDVIRSWVQPEDVCLLEAMQ 765
Query: 893 AGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTN 952
G L G + + +E+ + E Q+ PW S NF+ +
Sbjct: 766 VGQQHLHDTGYGN----DAETGGDDDNDEESESF--------EQQMAPWKASRNFLLAS- 812
Query: 953 QDRENIERLEITGVGDPSGRGLGFSYVRAAPKA 985
+ L++ G GDP+GRG GFS+++ + K
Sbjct: 813 ---QGKAMLKLHGEGDPTGRGEGFSFIKTSMKG 842
>gi|413954633|gb|AFW87282.1| hypothetical protein ZEAMMB73_404562 [Zea mays]
Length = 683
Score = 149 bits (375), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/151 (56%), Positives = 107/151 (70%), Gaps = 22/151 (14%)
Query: 1045 MIRKLSSEQAASGV-------------------QLQQQTRGKCQEIWDRQVQSLSAADDD 1085
M+RKLSSEQAASG+ QLQQQTR KCQEIWDRQVQSLSA D D
Sbjct: 1 MVRKLSSEQAASGITIDEIPVSKFARGQRMSFLQLQQQTREKCQEIWDRQVQSLSALDGD 60
Query: 1086 EIGSDSE-HSDLDSFAGDLENLLDAEEFEEEE-SNYDTKHDKVEGVKGLKMRRRPIQVQA 1143
+ SD+E HSDLDSFAGDLENLLDAEEF++E+ S D + DK +G++GLKMRR Q Q
Sbjct: 61 DNASDTEAHSDLDSFAGDLENLLDAEEFDDEDTSTADLRIDKADGMRGLKMRRCSTQAQI 120
Query: 1144 EEEIEDEAAEAAELCRLLMDDDEAELKKKKK 1174
+EIED+ EA+ L + L++DD ++K+KK+
Sbjct: 121 NKEIEDDETEAS-LAKKLLEDDGNDVKRKKQ 150
>gi|323308904|gb|EGA62137.1| Taf1p [Saccharomyces cerevisiae FostersO]
Length = 984
Score = 149 bits (375), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 106/341 (31%), Positives = 165/341 (48%), Gaps = 43/341 (12%)
Query: 653 AFKKKSDLSVKD-GHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNN 711
+F DL++ D V+LMEY E+ P+ LS GM L YY+K++ D L G
Sbjct: 529 SFSTSQDLTIGDTAPVYLMEYSEQTPVALSKFGMANKLINYYRKANEQDTLRPKLPVGET 588
Query: 712 CLGNVLTLEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKI 769
+VL ++ DKSPF G ++ G +L NM RAPVF H ++ TDFLL +S+ I
Sbjct: 589 ---HVLGVQ--DKSPFWNFGFVEPGHIVPTLYNNMIRAPVFKHDISGTDFLLTKSSGFGI 643
Query: 770 S----IRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCI 825
S +R I+ + V Q P+ E+ P S+ + + R+ + +YR + + I
Sbjct: 644 SNRFYLRNINHLFTVGQTFPVEEIPGPNSRKVTSMKATRLKMIIYRILNHNHSK----AI 699
Query: 826 GVDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHV 885
+D ++ FP+ R+K+KE +RDG K +W +K + ++ L PE +
Sbjct: 700 SIDPIAKHFPDQDYGQNRQKVKEFMKYQRDGPEKGLWRLKDDEKLLDNEAVKSLITPEQI 759
Query: 886 CSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIER-ELQITPWNLS 944
ESM GL Q ++ A S ++ E + PWN++
Sbjct: 760 SQVESMSQGL----------------------QFQEDNEAYNFDSKLKSLEENLLPWNIT 797
Query: 945 SNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKA 985
NF+ T Q R I +I GVGDP+G G GFS+++ + K
Sbjct: 798 KNFINST-QMRAMI---QIHGVGDPTGCGEGFSFLKTSMKG 834
>gi|2501986|gb|AAC62118.1| TAFII250 transcription factor [Mus musculus]
Length = 440
Score = 148 bits (374), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/277 (34%), Positives = 141/277 (50%), Gaps = 35/277 (12%)
Query: 849 CAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRLKHLGITQLTL 908
CA +R G W +K F +P+E ++R + PE C+Y SM A RLK G + +
Sbjct: 4 CADFKRTGMDSNWWVLKSDFRLPTEEEIRAMVSPEQCCAYYSMIAAEQRLKDAGYGEKSF 63
Query: 909 PASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENIERLEITGVGD 968
A P+E I+ E++ PWN + F+A + LE+TGV D
Sbjct: 64 FA---------PEEENEEDFQMKIDDEVRTAPWNTTRAFIAAM----KGKCLLEVTGVAD 110
Query: 969 PSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLRRLSMEAAREVLLKFN 1028
P+G G GFSYV+ K + K TVTGTDADLRRLS++ A+++L KF
Sbjct: 111 PTGCGEGFSYVKIPNKPTQQ----KDDKEPQPVKKTVTGTDADLRRLSLKNAKQLLRKFG 166
Query: 1029 VPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------VQLQQQTRGKCQEIWD 1073
VPEE I K +RW I ++R +S+EQA SG + Q++ + +CQ I+D
Sbjct: 167 VPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSKFARGSRFSVAEHQERYKEECQRIFD 226
Query: 1074 RQVQSLSAAD---DDEIGSDSEHSDLDSFAGDLENLL 1107
Q + LS+ + D S +E SD + ++EN+L
Sbjct: 227 LQNKVLSSTEVLSTDTDSSSAEDSDFEEMGKNIENML 263
>gi|115400381|ref|XP_001215779.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114191445|gb|EAU33145.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 1146
Score = 148 bits (374), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 106/334 (31%), Positives = 163/334 (48%), Gaps = 29/334 (8%)
Query: 660 LSVKDGHV-FLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLT 718
LS+ D L+EY EE PL+LSN GM YY++ S D +G
Sbjct: 545 LSLSDNSTSLLVEYSEEVPLMLSNFGMSNRFINYYRRKSMDDP-----TRPKAEIGETAV 599
Query: 719 LEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGK----ISIR 772
L P DKSPF G + G ++ +MYRAP+F H+ +TDFL+VRS+ G IR
Sbjct: 600 LLPQDKSPFSIFGHVDPGEITPAISNSMYRAPLFHHETKSTDFLIVRSSTGSGGSDYFIR 659
Query: 773 RIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSV 832
ID + V QQ P +++ P S+ + T S NRM + VYR + + L + E++
Sbjct: 660 NIDNLYVAGQQFPSVDIPGPHSRKVTTVSKNRMKMLVYRLLKKSPELRL----SISEVTA 715
Query: 833 QFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQ 892
P ++ R+K+K+ FL+ D + K ++ +P + +R PE VC ESMQ
Sbjct: 716 HIPGTTDMQNRQKVKD--FLQHDKDSKYWVPIE---PVPEQDVIRSWVQPEDVCLLESMQ 770
Query: 893 AGLYRLKHLGI-TQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACT 951
G L G + P + +A + D+ A E Q+ PW ++ NF+ +
Sbjct: 771 VGQQHLNDTGYGGEGDNPNAPGTAGASGKDD---YEDAEGESLEQQMAPWKVTRNFLLAS 827
Query: 952 NQDRENIERLEITGVGDPSGRGLGFSYVRAAPKA 985
+ L++ G GDP+ RG GFS+++ + K
Sbjct: 828 ----QGKAMLKLHGEGDPTRRGEGFSFIKTSMKG 857
>gi|349578474|dbj|GAA23640.1| K7_Taf1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 1066
Score = 148 bits (374), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 106/341 (31%), Positives = 165/341 (48%), Gaps = 43/341 (12%)
Query: 653 AFKKKSDLSVKD-GHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNN 711
+F DL++ D V+LMEY E+ P+ LS GM L YY+K++ D L G
Sbjct: 529 SFSTSQDLTIGDTAPVYLMEYSEQTPVALSKFGMANKLINYYRKANEQDTLRPKLPVGET 588
Query: 712 CLGNVLTLEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKI 769
+VL ++ DKSPF G ++ G +L NM RAPVF H ++ TDFLL +S+ I
Sbjct: 589 ---HVLGVQ--DKSPFWNFGFVEPGHIVPTLYNNMIRAPVFKHDISGTDFLLTKSSGFGI 643
Query: 770 S----IRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCI 825
S +R I+ + V Q P+ E+ P S+ + + R+ + +YR + + I
Sbjct: 644 SNRFYLRNINHLFTVGQTFPVEEIPGPNSRKVTSMKATRLKMIIYRILNHNHSK----AI 699
Query: 826 GVDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHV 885
+D ++ FP+ R+K+KE +RDG K +W +K + ++ L PE +
Sbjct: 700 SIDPIAKHFPDQDYGQNRQKVKEFMKYQRDGPEKGLWRLKDDEKLLDNEAVKSLITPEQI 759
Query: 886 CSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIER-ELQITPWNLS 944
ESM GL Q ++ A S ++ E + PWN++
Sbjct: 760 SQVESMSQGL----------------------QFQEDNEAYNFDSKLKSLEENLLPWNIT 797
Query: 945 SNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKA 985
NF+ T Q R I +I GVGDP+G G GFS+++ + K
Sbjct: 798 KNFINST-QMRAMI---QIHGVGDPTGCGEGFSFLKTSMKG 834
>gi|151943546|gb|EDN61857.1| TafII130 [Saccharomyces cerevisiae YJM789]
Length = 1066
Score = 148 bits (374), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 106/341 (31%), Positives = 165/341 (48%), Gaps = 43/341 (12%)
Query: 653 AFKKKSDLSVKD-GHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNN 711
+F DL++ D V+LMEY E+ P+ LS GM L YY+K++ D L G
Sbjct: 529 SFSTSQDLTIGDTAPVYLMEYSEQTPVALSKFGMANKLINYYRKANEQDTLRPKLPVGET 588
Query: 712 CLGNVLTLEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKI 769
+VL ++ DKSPF G ++ G +L NM RAPVF H ++ TDFLL +S+ I
Sbjct: 589 ---HVLGVQ--DKSPFWNFGFVEPGHIVPTLYNNMIRAPVFKHDISGTDFLLTKSSGFGI 643
Query: 770 S----IRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCI 825
S +R I+ + V Q P+ E+ P S+ + + R+ + +YR + + I
Sbjct: 644 SNRFYLRNINHLFTVGQTFPVEEIPGPNSRKVTSMKATRLKMIIYRILNHNHSK----AI 699
Query: 826 GVDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHV 885
+D ++ FP+ R+K+KE +RDG K +W +K + ++ L PE +
Sbjct: 700 SIDPIAKHFPDQDYGQNRQKVKEFMKYQRDGPEKGLWRLKDDEKLLDNEAVKSLITPEQI 759
Query: 886 CSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIER-ELQITPWNLS 944
ESM GL Q ++ A S ++ E + PWN++
Sbjct: 760 SQVESMSQGL----------------------QFQEDNEAYNFDSKLKSLEENLLPWNIT 797
Query: 945 SNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKA 985
NF+ T Q R I +I GVGDP+G G GFS+++ + K
Sbjct: 798 KNFINST-QMRAMI---QIHGVGDPTGCGEGFSFLKTSMKG 834
>gi|256272690|gb|EEU07667.1| Taf1p [Saccharomyces cerevisiae JAY291]
gi|259146776|emb|CAY80033.1| Taf1p [Saccharomyces cerevisiae EC1118]
Length = 1066
Score = 148 bits (374), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 106/341 (31%), Positives = 165/341 (48%), Gaps = 43/341 (12%)
Query: 653 AFKKKSDLSVKD-GHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNN 711
+F DL++ D V+LMEY E+ P+ LS GM L YY+K++ D L G
Sbjct: 529 SFSTSQDLTIGDTAPVYLMEYSEQTPVALSKFGMANKLINYYRKANEQDTLRPKLPVGET 588
Query: 712 CLGNVLTLEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKI 769
+VL ++ DKSPF G ++ G +L NM RAPVF H ++ TDFLL +S+ I
Sbjct: 589 ---HVLGVQ--DKSPFWNFGFVEPGHIVPTLYNNMIRAPVFKHDISGTDFLLTKSSGFGI 643
Query: 770 S----IRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCI 825
S +R I+ + V Q P+ E+ P S+ + + R+ + +YR + + I
Sbjct: 644 SNRFYLRNINHLFTVGQTFPVEEIPGPNSRKVTSMKATRLKMIIYRILNHNHSK----AI 699
Query: 826 GVDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHV 885
+D ++ FP+ R+K+KE +RDG K +W +K + ++ L PE +
Sbjct: 700 SIDPIAKHFPDQDYGQNRQKVKEFMKYQRDGPEKGLWRLKDDEKLLDNEAVKSLITPEQI 759
Query: 886 CSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIER-ELQITPWNLS 944
ESM GL Q ++ A S ++ E + PWN++
Sbjct: 760 SQVESMSQGL----------------------QFQEDNEAYNFDSKLKSLEENLLPWNIT 797
Query: 945 SNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKA 985
NF+ T Q R I +I GVGDP+G G GFS+++ + K
Sbjct: 798 KNFINST-QMRAMI---QIHGVGDPTGCGEGFSFLKTSMKG 834
>gi|6321713|ref|NP_011790.1| Taf1p [Saccharomyces cerevisiae S288c]
gi|1174556|sp|P46677.1|TAF1_YEAST RecName: Full=Transcription initiation factor TFIID subunit 1;
AltName: Full=TAFII-130; AltName: Full=TAFII-145;
AltName: Full=TBP-associated factor 1; AltName:
Full=TBP-associated factor 145 kDa
gi|595838|gb|AAA79178.1| Tafii145p [Saccharomyces cerevisiae]
gi|1323499|emb|CAA97304.1| TAF145 [Saccharomyces cerevisiae]
gi|2104897|emb|CAA58896.1| PIE1066 [Saccharomyces cerevisiae]
gi|285812462|tpg|DAA08362.1| TPA: Taf1p [Saccharomyces cerevisiae S288c]
gi|392299528|gb|EIW10622.1| Taf1p [Saccharomyces cerevisiae CEN.PK113-7D]
gi|1091233|prf||2020425B TATA box-binding protein-associated factor
Length = 1066
Score = 148 bits (373), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 106/341 (31%), Positives = 165/341 (48%), Gaps = 43/341 (12%)
Query: 653 AFKKKSDLSVKD-GHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNN 711
+F DL++ D V+LMEY E+ P+ LS GM L YY+K++ D L G
Sbjct: 529 SFSTSQDLTIGDTAPVYLMEYSEQTPVALSKFGMANKLINYYRKANEQDTLRPKLPVGET 588
Query: 712 CLGNVLTLEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKI 769
+VL ++ DKSPF G ++ G +L NM RAPVF H ++ TDFLL +S+ I
Sbjct: 589 ---HVLGVQ--DKSPFWNFGFVEPGHIVPTLYNNMIRAPVFKHDISGTDFLLTKSSGFGI 643
Query: 770 S----IRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCI 825
S +R I+ + V Q P+ E+ P S+ + + R+ + +YR + + I
Sbjct: 644 SNRFYLRNINHLFTVGQTFPVEEIPGPNSRKVTSMKATRLKMIIYRILNHNHSK----AI 699
Query: 826 GVDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHV 885
+D ++ FP+ R+K+KE +RDG K +W +K + ++ L PE +
Sbjct: 700 SIDPIAKHFPDQDYGQNRQKVKEFMKYQRDGPEKGLWRLKDDEKLLDNEAVKSLITPEQI 759
Query: 886 CSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIER-ELQITPWNLS 944
ESM GL Q ++ A S ++ E + PWN++
Sbjct: 760 SQVESMSQGL----------------------QFQEDNEAYNFDSKLKSLEENLLPWNIT 797
Query: 945 SNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKA 985
NF+ T Q R I +I GVGDP+G G GFS+++ + K
Sbjct: 798 KNFINST-QMRAMI---QIHGVGDPTGCGEGFSFLKTSMKG 834
>gi|443921816|gb|ELU41362.1| atypical/TAF1 protein kinase [Rhizoctonia solani AG-1 IA]
Length = 696
Score = 148 bits (373), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 106/340 (31%), Positives = 166/340 (48%), Gaps = 36/340 (10%)
Query: 653 AFKKKSDLSVKDGHVFLM-EYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNN 711
KK DL++KD F++ EY EE P +LSN GMG+ L YY+K D+ + G+
Sbjct: 47 VLKKTGDLTLKDNSNFVLWEYSEEHPPVLSNFGMGSVLVNYYRKK---DEKDDYVPKGD- 102
Query: 712 CLGNVLTLEPGDKSPFL--GDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKG-- 767
LG LEP D+SPF G I+ G + ++ N+ RAP+F H + + +G
Sbjct: 103 -LGEPFVLEPNDESPFFKYGSIQHGQTIPAMYNNLVRAPLFKHTPPELTGTIRSTTRGES 161
Query: 768 KISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGV 827
K IR I + V Q P++EV P S+ + T++I + L+ + + + +K L +
Sbjct: 162 KYYIRDIKHLYVSGQTFPVVEVPGPHSRKI-THTIKQRLIIIACKLLSKSKHERL---KI 217
Query: 828 DELSVQFPNLSEAIIRKKLKECA---FLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEH 884
L FP+ +E +R++LK +L G + W +K +F PS D+ K+ PEH
Sbjct: 218 SRLMKYFPDQNELQMRQRLKVGRPRDYLHYPGEHQTFWRLKPSFQRPSPADMLKMVEPEH 277
Query: 885 VCSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLS 944
V ESM G L G + E+ + ++ E Q+ PW +
Sbjct: 278 VVLSESMIVGQRHLLDSGYGK---------------SESDVMEDEGKLDTEQQLAPWITT 322
Query: 945 SNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPK 984
NF+ T + L++ G GDP+GRG GFS++R + K
Sbjct: 323 KNFIHAT----QGKAMLKLHGEGDPTGRGEGFSFIRVSMK 358
>gi|322694444|gb|EFY86273.1| transcription factor TFIID complex subunit Taf111 [Metarhizium
acridum CQMa 102]
Length = 1230
Score = 148 bits (373), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 109/377 (28%), Positives = 170/377 (45%), Gaps = 48/377 (12%)
Query: 654 FKKKSDLSVKDGHV-FLMEYCEERPLLLSNAGMGANLCTYYQK--SSPGDQAGALLCSGN 710
++ DLS+ D L EYCE RP +L+N GMG+ L YY++ ++ DQ
Sbjct: 508 YRLSKDLSLSDNSTAVLFEYCEPRPRVLNNFGMGSKLINYYRRKDNNEDDQLP------K 561
Query: 711 NCLGNVLTLEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKG- 767
LG L P D+SPF G + +G + +L MYRAPVF H TDFL+VRS G
Sbjct: 562 QELGEYRMLLPEDRSPFSLFGTVDSGETVPTLHNEMYRAPVFKHTPRGTDFLVVRSTTGV 621
Query: 768 ---KISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPC 824
K + +ID + VV Q P ++V P S+ + S NRM + +R +
Sbjct: 622 EGSKWHLHKIDHLHVVGQTFPSVDVPGPHSRRVTNASKNRMKMLAFRMI----RHSQTDN 677
Query: 825 IGVDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEH 884
+ +++ + ++ R+KLKE R+ K +W +K +P E +R + PE
Sbjct: 678 CQLSDITKHIADSTDTQNRQKLKEFLQYDRESGEKGMWRLKPNEILPDENAIRAMIKPEE 737
Query: 885 VCSYESMQAGLYRLKHLG------------ITQLTLPASISSAMSQLPDEAIALAAASHI 932
V ++MQ G+ L+ G + S+ P A
Sbjct: 738 VSLLDAMQLGIKELEDAGYDPRNANIDDDVMDVDAEDDEDDEGGSKAPKGAKKPGEKQEE 797
Query: 933 ERELQITPWNLSSNFV-ACTNQDRENIERLEITGVGDPSGRGLGFSYVRAA--------- 982
++ PW + F+ AC + L++ G GDP+G GLGFS++R +
Sbjct: 798 TLADKMAPWKTTKAFIDACAQK-----AMLQLHGEGDPTGHGLGFSFIRTSMKGGYIEAV 852
Query: 983 --PKASVSSAMVKKKAA 997
P A+ + AM ++K A
Sbjct: 853 QGPLATSADAMEREKRA 869
>gi|190406724|gb|EDV09991.1| transcription initiation factor TFIID subunit 1 [Saccharomyces
cerevisiae RM11-1a]
Length = 1066
Score = 147 bits (372), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 105/341 (30%), Positives = 165/341 (48%), Gaps = 43/341 (12%)
Query: 653 AFKKKSDLSVKD-GHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNN 711
+F DL++ D V+LMEY E+ P+ LS GM L YY+K++ D L G
Sbjct: 529 SFSTSQDLTIGDTAPVYLMEYSEQTPVALSKFGMANKLINYYRKANEQDTLRPKLPVGET 588
Query: 712 CLGNVLTLEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKI 769
+VL ++ DKSPF G ++ G +L NM RAPVF H ++ TDFLL +S+ I
Sbjct: 589 ---HVLGVQ--DKSPFWNFGFVEPGHIVPTLYNNMIRAPVFKHDISGTDFLLTKSSGFGI 643
Query: 770 S----IRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCI 825
S +R I+ + + Q P+ E+ P S+ + + R+ + +YR + + I
Sbjct: 644 SNRFYLRNINHLFTIGQTFPVEEIPGPNSRKVTSMKATRLKMIIYRILNHNHSK----AI 699
Query: 826 GVDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHV 885
+D ++ FP+ R+K+KE +RDG K +W +K + ++ L PE +
Sbjct: 700 SIDPIAKHFPDQDYGQNRQKVKEFMKYQRDGPEKGLWRLKDDEKLLDNEAVKSLITPEQI 759
Query: 886 CSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIER-ELQITPWNLS 944
ESM GL Q ++ A S ++ E + PWN++
Sbjct: 760 SQVESMSQGL----------------------QFQEDNEAYNFDSKLKSLEENLLPWNIT 797
Query: 945 SNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKA 985
NF+ T Q R I +I GVGDP+G G GFS+++ + K
Sbjct: 798 KNFINST-QMRAMI---QIHGVGDPTGCGEGFSFLKTSMKG 834
>gi|303282451|ref|XP_003060517.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457988|gb|EEH55286.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 1522
Score = 147 bits (372), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 114/431 (26%), Positives = 206/431 (47%), Gaps = 53/431 (12%)
Query: 661 SVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLTLE 720
+ +G + L+ Y E+ P L++ GMGA TYY++ + GD G L G +V+ L
Sbjct: 531 AATNGQLMLVSYAEKDPPLIAKVGMGAKRVTYYRRKTQGDTTGRALTHGGTR--HVVDLR 588
Query: 721 PGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTD--FLLVRSAKGKISIRRIDKVA 778
P SPF+ ++ G Q +LET ++RAP+F ++ + + ++L+R G++S+R + +
Sbjct: 589 PEASSPFISELPPGQPQEALETTLFRAPIFQRRIKSDEGLYILIRGPHGELSLREVTEHF 648
Query: 779 VVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLS 838
VV Q+EP +EV P + L+ + VN FS +R + E+ V+ ++
Sbjct: 649 VVGQEEPHVEVFQPNTDRLRDF--EERAVNAACIFSLLKQRA--DRVPESEMRVKVSDIE 704
Query: 839 EAI--------IRKKLKECAFL--RRDGNGKQV----------WSMKRTFHIPSEGDLRK 878
+ I++++++ L R G+ ++ + + T+ + L +
Sbjct: 705 KMFHRAIQGKDIKRRIRQKILLPVRPPGSRRRADDLYDDDADEFELNPTYRFEDDLMLHR 764
Query: 879 LAYPEHVCSYESMQAGLYRLKH------LGITQLTLPASISSAMS--QLPDEAIALAAAS 930
+ PE VC+++SM+A +L+ + + + S + ++ Q+ + +A +
Sbjct: 765 MCPPEDVCAFDSMRAARSKLERGRTADEVNRIRKLMGTSATQMLNAFQMIYRSTPIAQRN 824
Query: 931 H---IERELQITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASV 987
+E LQ+ PW ++ F+A R + + + +G+ + YVR P
Sbjct: 825 RFRDLELMLQLQPWAQTTEFLAAVG-GRAVLHLDASRKMREKTGKF--YHYVRRQPPKDP 881
Query: 988 ---SSAMVKKKAAANRGGSTVTGTDADLRRLSMEAAREVLLKFNVPEEMIAKQTRWHRIA 1044
++A VK TVTGTDADLR+L+M +L F VP I K RW RI
Sbjct: 882 DMPTTAKVKP--------GTVTGTDADLRKLTMPQTERILTGFGVPLADIKKLHRWKRIG 933
Query: 1045 MIRKLSSEQAA 1055
+IR+LS A
Sbjct: 934 LIRELSGAATA 944
>gi|167518894|ref|XP_001743787.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777749|gb|EDQ91365.1| predicted protein [Monosiga brevicollis MX1]
Length = 1707
Score = 147 bits (372), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 135/485 (27%), Positives = 234/485 (48%), Gaps = 66/485 (13%)
Query: 653 AFKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNC 712
AF K ++S + ++EY EE P LL M + L YY+K D+ +
Sbjct: 671 AFHKTWEISAFYDQLVVLEYAEEYPPLLCRPSMCSELRCYYRKIKANDRTRPSIE----- 725
Query: 713 LGNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIR 772
LG + L ++SPFLG + G S+E N++RAP++ K+ TDFLLV+ + I
Sbjct: 726 LGTLAILNTNEESPFLGTLPPGHPVMSIENNLFRAPIYDQKLEQTDFLLVKR-NDQWFIL 784
Query: 773 RIDKVAVVAQQEPLMEVMSPGSK---NLQTYSINRMLVNVYREFSAAAKRGLLP----CI 825
R+ VV Q P +EV +P SK +L+ + +++N++ +R P +
Sbjct: 785 RLKTAFVVGQTLPKLEVPAPNSKREQDLEKRHLEMIIINLFNNKMTDPRRS--PNDPVLL 842
Query: 826 GVDELSVQFPNLSEAIIRKKLKECAFLRR----DGNGKQVW-SMKRTFHIPSEGDLRKLA 880
VD++ + N +++ IRK LKE A +R D G W S+ + I E K +
Sbjct: 843 RVDDVR-RTTNSTDSSIRKVLKEYATFKRHAASDFKGAWEWRSVDKKNKIGQELLEGKFS 901
Query: 881 YPEHVCSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEA----------IALAAAS 930
PE C+YESM+A RL +G +L ++ + P + + L
Sbjct: 902 -PEDFCAYESMKAAEQRLVDMGY-RLANDKNLEAIDETDPGTSKGRRFWSVLLLTLGRTM 959
Query: 931 HIE-RELQITPWNLSSNFVACTNQDRENIER---LEITGVGDPSGRGLGFSYVRAAPKAS 986
++ E ++ PW ++ NFV C I+R L +TG GDP+G LG+S++R A K +
Sbjct: 960 WVQVDERRLAPWQITKNFVDC-------IKRSCLLAVTGAGDPTGHSLGYSFLRLANKPA 1012
Query: 987 VSS----AMVKKKAAANRGGSTVTGTDADLRRLSMEAAREVL-LKFNVPEEMIAKQTRWH 1041
+ + + + N+ ++ D DLR+L+++ ARE+L K+ + + + RW
Sbjct: 1013 ANRRDDEMLPELPESRNKQLGKMSSKDKDLRKLNLKEARELLHQKYGLGMDYLNSLPRWQ 1072
Query: 1042 RIAMIRKLSSEQA--------------ASGVQLQQQTRGKCQEIWDRQVQSLSAADDDEI 1087
I+++R ++E+A +S + + + Q ++D + +SL ++DEI
Sbjct: 1073 CISLVRYKANEEADEQGKTLNYSRGTKSSAAEHKMRFTSDSQLVFDNERKSL---ENDEI 1129
Query: 1088 GSDSE 1092
S+ E
Sbjct: 1130 LSEPE 1134
>gi|322704835|gb|EFY96426.1| transcription factor TFIID complex subunit Taf111 [Metarhizium
anisopliae ARSEF 23]
Length = 1230
Score = 147 bits (372), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 109/377 (28%), Positives = 170/377 (45%), Gaps = 48/377 (12%)
Query: 654 FKKKSDLSVKDGHV-FLMEYCEERPLLLSNAGMGANLCTYYQK--SSPGDQAGALLCSGN 710
++ DLS+ D L EYCE RP +L+N GMG+ L YY++ ++ DQ
Sbjct: 508 YRLSKDLSLSDNSTAVLFEYCEPRPRVLNNFGMGSKLINYYRRKDNNEDDQLP------K 561
Query: 711 NCLGNVLTLEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKG- 767
LG L P D+SPF G + +G + +L MYRAPVF H TDFL+VRS G
Sbjct: 562 QELGEYRMLLPEDRSPFSLFGTVDSGETVPTLHNEMYRAPVFKHMPRGTDFLVVRSTTGV 621
Query: 768 ---KISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPC 824
K + +ID + VV Q P ++V P S+ + S NRM + +R +
Sbjct: 622 EGSKWHLHKIDHLHVVGQTFPSVDVPGPHSRRVTNASKNRMKMLAFRMI----RHSQTDN 677
Query: 825 IGVDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEH 884
+ +++ + ++ R+KLKE R+ K +W +K +P E +R + PE
Sbjct: 678 CQLSDITKHIADSTDTQNRQKLKEFLQYDRESGEKGMWRLKPNEILPDENAIRAMIKPEE 737
Query: 885 VCSYESMQAGLYRLKHLG------------ITQLTLPASISSAMSQLPDEAIALAAASHI 932
V ++MQ G+ L+ G + S+ P A
Sbjct: 738 VSLLDAMQLGIKELEDAGYDPRNANIDDDVMDVDAEDEDDDEGGSKAPKGAKKPGEKQEE 797
Query: 933 ERELQITPWNLSSNFV-ACTNQDRENIERLEITGVGDPSGRGLGFSYVRAA--------- 982
++ PW + F+ AC + L++ G GDP+G GLGFS++R +
Sbjct: 798 TLADKMAPWKTTKAFIDACAQK-----AMLQLHGEGDPTGHGLGFSFIRTSMKGGYIEAV 852
Query: 983 --PKASVSSAMVKKKAA 997
P A+ + AM ++K A
Sbjct: 853 QGPLATSADAMEREKRA 869
>gi|159124311|gb|EDP49429.1| transcription factor TFIID complex 145 kDa subunit, putative
[Aspergillus fumigatus A1163]
Length = 1094
Score = 147 bits (371), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 102/337 (30%), Positives = 160/337 (47%), Gaps = 37/337 (10%)
Query: 660 LSVKDG-HVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLT 718
LS+ D +V L+EY EE PL+LSN GM YY++ + D +G +
Sbjct: 549 LSMADNSNVLLVEYSEESPLMLSNFGMSNRFINYYRRKNMEDS-----TRPKAEIGETVV 603
Query: 719 LEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGK----ISIR 772
L P DKSPF G + G ++ +MYRAP+F H+ +TDFL+VRS+ G +R
Sbjct: 604 LLPQDKSPFSIFGHVDPGEITPTISNSMYRAPLFQHQPRSTDFLVVRSSTGAGGSDYYLR 663
Query: 773 RIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSV 832
I+ + V QQ P ++V P S+ + T + NRM + VYR + L + +++
Sbjct: 664 NIEHLYVAGQQFPSVDVPGPHSRKVTTVAKNRMKMLVYRLLKKSPDMRL----SISDVTA 719
Query: 833 QFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQ 892
P S+ R+K+K+ FL+ D + K ++ +P +R PE VC E+MQ
Sbjct: 720 HIPGTSDMQNRQKVKD--FLQHDKDSKYWVPLE---PVPESDTIRSWVQPEDVCLLEAMQ 774
Query: 893 AGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTN 952
G +HL T + A E Q+ PW + NF+ +
Sbjct: 775 VG---QQHLHDTGYGIDAETGGDED---------EDGEGESFEQQMAPWKATRNFLLAS- 821
Query: 953 QDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSS 989
+ L++ G GDP+GRG GFS+++ + K +
Sbjct: 822 ---QGKAMLKLHGEGDPTGRGEGFSFIKTSMKGGFKA 855
>gi|70991801|ref|XP_750749.1| transcription factor TFIID complex 145 kDa subunit [Aspergillus
fumigatus Af293]
gi|66848382|gb|EAL88711.1| transcription factor TFIID complex 145 kDa subunit, putative
[Aspergillus fumigatus Af293]
Length = 1093
Score = 147 bits (371), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 102/337 (30%), Positives = 160/337 (47%), Gaps = 37/337 (10%)
Query: 660 LSVKDG-HVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLT 718
LS+ D +V L+EY EE PL+LSN GM YY++ + D +G +
Sbjct: 548 LSMADNSNVLLVEYSEESPLMLSNFGMSNRFINYYRRKNMEDS-----TRPKAEIGETVV 602
Query: 719 LEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGK----ISIR 772
L P DKSPF G + G ++ +MYRAP+F H+ +TDFL+VRS+ G +R
Sbjct: 603 LLPQDKSPFSIFGHVDPGEITPTISNSMYRAPLFQHQPRSTDFLVVRSSTGAGGSDYYLR 662
Query: 773 RIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSV 832
I+ + V QQ P ++V P S+ + T + NRM + VYR + L + +++
Sbjct: 663 NIEHLYVAGQQFPSVDVPGPHSRKVTTVAKNRMKMLVYRLLKKSPDMRL----SISDVTA 718
Query: 833 QFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQ 892
P S+ R+K+K+ FL+ D + K ++ +P +R PE VC E+MQ
Sbjct: 719 HIPGTSDMQNRQKVKD--FLQHDKDSKYWVPLE---PVPESDTIRSWVQPEDVCLLEAMQ 773
Query: 893 AGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTN 952
G +HL T + A E Q+ PW + NF+ +
Sbjct: 774 VG---QQHLHDTGYGIDAETGGDED---------EDGEGESFEQQMAPWKATRNFLLAS- 820
Query: 953 QDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSS 989
+ L++ G GDP+GRG GFS+++ + K +
Sbjct: 821 ---QGKAMLKLHGEGDPTGRGEGFSFIKTSMKGGFKA 854
>gi|340515316|gb|EGR45571.1| predicted protein [Trichoderma reesei QM6a]
Length = 1139
Score = 147 bits (371), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 116/406 (28%), Positives = 183/406 (45%), Gaps = 53/406 (13%)
Query: 626 HLIRTKIHLLPRAQKLPGENKSLRPPGAFKKKSDLSVKDGHV-FLMEYCEERPLLLSNAG 684
H IR L + +++ G+ + F+K D+S+ D L EYCE RP +L+
Sbjct: 490 HTIRFDKPLHFKRKQMKGKAHEI-----FQKSKDVSLCDNSTAVLFEYCEPRPRVLNGFA 544
Query: 685 MGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLTLEPGDKSPF--LGDIKAGCSQSSLET 742
MG L YY++ ++ L LG TL P D+SPF G + G +L
Sbjct: 545 MGNRLINYYRRKDNSNEEEQL---AKLDLGEYRTLLPEDRSPFSLFGTVDPGEIVPTLHN 601
Query: 743 NMYRAPVFTHKVATTDFLLVRSAKG----KISIRRIDKVAVVAQQEPLMEVMSPGSKNLQ 798
MYRAPVF H +TDFL+VRS G K + +ID + VV Q P ++V P S+ +
Sbjct: 602 EMYRAPVFKHTPRSTDFLVVRSTTGIGGAKWYLHKIDHLHVVGQAFPSVDVPGPHSRRVT 661
Query: 799 TYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLSEAIIRKKLKECAFLRRDGNG 858
S +RM + +R + + +++ + ++ R+KLKE RD
Sbjct: 662 NASKSRMKMLAFRMIRHSRSDNCQ----LSDITKHIADSTDTQNRQKLKEFLQYDRDSKE 717
Query: 859 KQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRLKHLGITQLTLPASISSAMSQ 918
K +W +K +P E +R + PE VC ++MQ G+ L+ G A+I
Sbjct: 718 KGMWRLKPGEVLPDENAIRAMIKPEEVCLLDAMQLGIKELEDAGYDPRN--ATIDDDAQG 775
Query: 919 L----------PDEAIALAAASHIERELQ-----ITPWNLSSNFV-ACTNQDRENIERLE 962
L I +E++ + + PW + F+ AC + L+
Sbjct: 776 LDADEEEDDDGEGSKIVKGPKKVVEKQEETLADKMAPWKTTKAFIDACAQK-----AMLQ 830
Query: 963 ITGVGDPSGRGLGFSYVRAA-----------PKASVSSAMVKKKAA 997
+ G GDP+G GLGFS++R + P A+ + AM ++K A
Sbjct: 831 LHGEGDPTGHGLGFSFIRTSMKGGYIEAVQGPLATSADAMEREKRA 876
>gi|367016255|ref|XP_003682626.1| hypothetical protein TDEL_0G00480 [Torulaspora delbrueckii]
gi|359750289|emb|CCE93415.1| hypothetical protein TDEL_0G00480 [Torulaspora delbrueckii]
Length = 1018
Score = 147 bits (371), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 116/382 (30%), Positives = 183/382 (47%), Gaps = 48/382 (12%)
Query: 611 HKSLADQNVRPNSLIHLIRTKIHLLPRAQKLPGENKSLRPPGAFKKKSDLSVKD-GHVFL 669
H+ +++RP + +++ +K+ + R + E K +F DL+V D VFL
Sbjct: 446 HRPNFGKSIRPGT--NIVFSKLKVRKRKRDKGKEVKE-----SFSSTQDLTVGDTAPVFL 498
Query: 670 MEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLTLEPGDKSPF-- 727
+EY E+ P++LS GM L YY+K + D + L G +VL ++ DKSPF
Sbjct: 499 LEYTEQTPIVLSKFGMANKLINYYRKMNEQDASRPKLPVGET---HVLGVQ--DKSPFWN 553
Query: 728 LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKIS----IRRIDKVAVVAQQ 783
G ++ G +L NM RAPVF H V+ TDFLLVRS+ +S +R I+ + V Q
Sbjct: 554 FGFVEPGHIVPTLYNNMVRAPVFKHDVSGTDFLLVRSSGNGVSNRFYLRPINHLFAVGQT 613
Query: 784 EPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLSEAIIR 843
P+ EV P S+ + + R+ + VYR + + I ++ ++ FP+ R
Sbjct: 614 FPVEEVPGPNSRKVTSMRTTRLRMVVYRILNRTPSQ----AISIEPIARHFPDQDYGQNR 669
Query: 844 KKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRLKHLGI 903
+K+KE +R+G+ K +W +K + + +KL PE V ESM GL +
Sbjct: 670 QKIKEFMKYQREGSDKGLWKLKDGEPLLDNENAKKLISPEQVSEVESMNQGLQFQE---- 725
Query: 904 TQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENIERLEI 963
D ++ E + PWN + NFV T Q R I+ I
Sbjct: 726 -----------------DSEFFNFDEKLLKLEENLLPWNATKNFVNAT-QMRAMIQ---I 764
Query: 964 TGVGDPSGRGLGFSYVRAAPKA 985
G GDP+G G GFS+++ + K
Sbjct: 765 HGAGDPTGCGEGFSFLKTSMKG 786
>gi|452847009|gb|EME48941.1| hypothetical protein DOTSEDRAFT_67851 [Dothistroma septosporum
NZE10]
Length = 1171
Score = 147 bits (370), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 107/348 (30%), Positives = 161/348 (46%), Gaps = 34/348 (9%)
Query: 654 FKKKSDLSVKD-GHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNC 712
F K DLS+ D V L+EY EE P++LSN GMG L YY+K DQ
Sbjct: 560 FAKAEDLSLGDNASVLLLEYSEEAPMMLSNFGMGNRLINYYRKRDADDQE-----RPKEP 614
Query: 713 LGNVLTLEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAK---- 766
+G L DKSPF G + G + +++ ++RAPVF H+ TTDF++ S+
Sbjct: 615 IGETHVLLTQDKSPFSNFGHVDKGETVPTVQNGLFRAPVFPHQGKTTDFIIGISSTFETH 674
Query: 767 GKISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIG 826
+ +R ++ + VV QQ PL E+ S+ + + R+ YR ++ + R +
Sbjct: 675 DRFFLRNVENLHVVGQQFPLAEIPGQHSRKVTDAAKKRLKALAYRIYTKSLTRK-DKVLD 733
Query: 827 VDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQ----VWSMKRTFHIPSEGDLRKLAYP 882
L P R K++E R N + VW + +P LR P
Sbjct: 734 NATLMPHLPGHDMPQTRSKMREFMKYERVSNRGEGSNGVWVPQAGNTVPDADTLRGWIRP 793
Query: 883 EHVCSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWN 942
E VC +SMQ G+ L LGI++ ++ DE + + IE+ Q+ PW
Sbjct: 794 EDVCLLDSMQVGVQHLLDLGISE-----------TKEADEDKDVEEGTDIEQ--QLAPWR 840
Query: 943 LSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSA 990
+ NF+ T + L + G GDP+GRGLGFS V+ + K +A
Sbjct: 841 ATKNFLNAT----QGKAMLMLHGDGDPTGRGLGFSLVKTSMKGGFKAA 884
>gi|290990421|ref|XP_002677835.1| predicted protein [Naegleria gruberi]
gi|284091444|gb|EFC45091.1| predicted protein [Naegleria gruberi]
Length = 996
Score = 147 bits (370), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 161/614 (26%), Positives = 274/614 (44%), Gaps = 85/614 (13%)
Query: 385 NFFP--------LDQHDWEENIVWDNSPAASDNSIESHEIAGADVESALMRGIELDTGQN 436
NF P +D WE+ IVW++ D+ +E + + + +E + G E ++G
Sbjct: 112 NFIPPERVNVENVDMVKWEDEIVWED-----DSRVEIGKQSYSILEELSVIGYEHNSGNW 166
Query: 437 NFHERSTSPNEKDCIVNMQNSPVLSETFGSKSSSDNTSHLFTESRYHPQLLRLESQLDLD 496
S+ E++ I+ + S ++ S S + T L S + R + + D
Sbjct: 167 GMIHVSS---EEEAIIPLPKSITITTVPLSNSILEETPFLSETSLKKKRKYRKKKKFD-- 221
Query: 497 NHSHANGIKENVSI---KLCQSDAVKRFSKHSLQNRDMMEGSWLDNIIWEPVDAVGKP-- 551
+ENV + KL +K + L N D++ WLD I W+ D KP
Sbjct: 222 ------SPQENVQVSPNKLIDKSNLKEENLQFL-NTDLLNCDWLDEIYWD--DNQPKPNE 272
Query: 552 -KLILDLQDEQMLF----EILDNKDDEHPLLHAGAM--------IITRSAKPSDFKPA-- 596
KLILDL D+ M++ EI DN + L+ + II + KPA
Sbjct: 273 EKLILDLNDKSMIYDIDLEIKDNDEISVEFLYQSSCNQVSNRNEIIPKKYHVQHSKPAIE 332
Query: 597 ---ESVKLFYLGKELEDHKSLADQNVRPNSLIHLIRTKIHLLPRAQKLPGENKSLRPPGA 653
+ LF GKE+ K L+ + + N I L +K P+ R +
Sbjct: 333 LDSKYYNLFPKGKEV-SQKKLS--HFKKNESIRLNYSK----PK-----------RKIKS 374
Query: 654 FKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCL 713
+ + DLS D + LME+ E P L++ GM N+ Y +K N
Sbjct: 375 IQSRMDLSAVDNQLVLMEFLERSPSLINKFGMATNIVNYCKKPETFQPIPI------NKN 428
Query: 714 GNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVR--SAKGKIS- 770
G + ++ D+ P L ++++ + + NMY + ++ KV +DFLL + + G+ +
Sbjct: 429 GITIMVDNEDEIPLLTNLESNDKIITAQNNMYSSQIYEQKVKNSDFLLCQRTTTDGRSTW 488
Query: 771 -IRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDE 829
IR I +V +P +EV P +++L +Y N + ++ + F + G I V +
Sbjct: 489 FIREIPNEYLVGHIQPQIEVYPPRTRSLDSYINNALSYHICKFFKDKIRNGKKAKISVKD 548
Query: 830 LSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYE 889
++ +F ++ IR+KLKE A L R GN VW + +P++ +L++L PE +C E
Sbjct: 549 ITSKFDDIPRQTIREKLKEFATLDRKGN---VWVAIKE-KLPTDEELQRLVTPEMICVNE 604
Query: 890 SMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVA 949
SM G Y+ I + + + ++L D+ L A I+R PW +SNF
Sbjct: 605 SMILGDYKFNRQHIDDRSDMVAYELSYAKLEDKYRKLINA--IQRIKNNLPWEQTSNFQL 662
Query: 950 CTNQDRENIERLEI 963
C ++EN+ +LE+
Sbjct: 663 CFKSNKENV-KLEL 675
>gi|119469767|ref|XP_001257976.1| transcription factor TFIID complex 145 kDa subunit, putative
[Neosartorya fischeri NRRL 181]
gi|119406128|gb|EAW16079.1| transcription factor TFIID complex 145 kDa subunit, putative
[Neosartorya fischeri NRRL 181]
Length = 1109
Score = 146 bits (369), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 157/337 (46%), Gaps = 37/337 (10%)
Query: 660 LSVKDG-HVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLT 718
LS+ D +V L+EY EE PL+LSN GM YY++ S D +G +
Sbjct: 549 LSMADNSNVLLVEYSEESPLMLSNFGMSNRFINYYRRKSMEDS-----TRPKAEIGETVV 603
Query: 719 LEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGK----ISIR 772
L P DKSPF G + G ++ +MYRAP+F H+ +TDFL+VRS+ G +R
Sbjct: 604 LLPQDKSPFSIFGHVDPGEITPTISNSMYRAPLFQHQPRSTDFLVVRSSTGAGGSDYYLR 663
Query: 773 RIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSV 832
I+ + V QQ P ++V P S+ + T + NRM + VYR + L + +++
Sbjct: 664 NIEHLYVAGQQFPSVDVPGPHSRKVTTVAKNRMKMLVYRLLKKSPDLRL----SISDVTA 719
Query: 833 QFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQ 892
P S+ R+K+K+ FL+ D + K ++ +P +R PE VC E+MQ
Sbjct: 720 HIPGTSDMQNRQKVKD--FLQHDKDSKYWVPLE---PVPESDTIRSWVQPEDVCLLEAMQ 774
Query: 893 AGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTN 952
G L G + E Q+ PW + NF+ +
Sbjct: 775 VGQQHLHDTGYG------------NDAETGGDEDEDGEGESFEQQMAPWKATRNFLLAS- 821
Query: 953 QDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSS 989
+ L++ G GDP+GRG GFS+++ + K +
Sbjct: 822 ---QGKAMLKLHGEGDPTGRGEGFSFIKTSMKGGFKA 855
>gi|149247936|ref|XP_001528355.1| hypothetical protein LELG_00874 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146448309|gb|EDK42697.1| hypothetical protein LELG_00874 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 1279
Score = 146 bits (368), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 125/398 (31%), Positives = 185/398 (46%), Gaps = 52/398 (13%)
Query: 618 NVRPNSLIHLIRTKIHLLPRAQKLPGENKSLRPPGAFKKKSDLSVKD-GHVFLMEYCEER 676
NVRP +L+ R L +K + KSL F K +DLS D ++ +EY E+
Sbjct: 600 NVRPGTLVSFSR-----LKIRKKKKDKGKSLHE--VFAKTTDLSTADTANIVALEYSEQY 652
Query: 677 PLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLTLEPGDKSPF--LGDIKAG 734
P +LSN GMG+ L YY+K D + G +VL LE D+SPF G++ G
Sbjct: 653 PFVLSNFGMGSKLINYYRKEKEDDTSRPKAQVGET---HVLGLE--DRSPFWNFGEVAPG 707
Query: 735 CSQSSLETNMYRAPVFTHKVATTDFLLVRS----AKGKISIRRIDKVAVVAQQEPLMEVM 790
+L NM RAP+F H TDFLLV S + + +R I+ V P E+
Sbjct: 708 DFVPTLYNNMGRAPIFKHDPRNTDFLLVSSQGAGSHQRYFLRAINFNFAVGNVFP-SEIP 766
Query: 791 SPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLSEAIIRKKLKECA 850
+P S+ + S NR+ + VYR +A P I V ++S FP ++ R++LKE
Sbjct: 767 APHSRKVTNISKNRLKMIVYRVMNAKGA----PRIVVKDVSKHFPEQTDMQSRQRLKEFM 822
Query: 851 FLRRDGNGKQVWSMK-RTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRLKH----LGITQ 905
+R G+ + W ++ +IPSE D+R + PE + MQ G ++ G +
Sbjct: 823 EYQRQGDDQGFWKVRGMDDNIPSEEDIRAMITPEDSAMVDIMQCGQQLIEDNSVLFGDKR 882
Query: 906 LTLPASISSAMSQLPDEAIA-------------------LAAASHIERELQITPWNLSSN 946
+ + E A S I+ E ++ PWNLS N
Sbjct: 883 RDAKKKLEGKDGKDSKEGDAEDVGGTDVNDDKKEKSKKLKEGESEIDLEEEMAPWNLSRN 942
Query: 947 FVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPK 984
FV NQ + L++ G GDP+G GLG+S +RA+ K
Sbjct: 943 FVVA-NQTK---AMLQLNGEGDPTGIGLGYSMLRASQK 976
>gi|407917404|gb|EKG10713.1| Transcription initiation factor TFIID subunit 1 domain of unknown
function [Macrophomina phaseolina MS6]
Length = 1153
Score = 145 bits (367), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 108/369 (29%), Positives = 172/369 (46%), Gaps = 42/369 (11%)
Query: 626 HLIRTKIHLLPRAQKLPGENKSLRPPGAFKKKSDLSVKDG-HVFLMEYCEERPLLLSNAG 684
H+IR + ++ G++ P + DLS+ D +V L+EY EE P +LSN G
Sbjct: 519 HIIRFDKPKFKKRKQFKGQD----PKTVYATSEDLSMADNSNVLLLEYSEEYPTVLSNFG 574
Query: 685 MGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLTLEPGDKSPF--LGDIKAGCSQSSLET 742
M L YY++ D L +G + L P D+SPF G+++ G + +L
Sbjct: 575 MCNRLINYYRRKDKDDTYRPKLD-----IGEPVVLTPNDQSPFAIFGEVRQGETVPTLHN 629
Query: 743 NMYRAPVFTHKVATTDFLLVRSAKG----KISIRRIDKVAVVAQQEPLMEVMSPGSKNLQ 798
M+RAPVF H+ TDFL++RS G K +R ++ + VV QQ P +V S+ +
Sbjct: 630 GMFRAPVFQHETKPTDFLVIRSHTGTHGTKWYLRNVENLFVVGQQFPSQQVPGIHSRKVT 689
Query: 799 TYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQ--FPNLSEAIIRKKLKECAFLRRDG 856
S R+ + YR ++ + P I + +Q P A R K++E F++ D
Sbjct: 690 DISKRRLKMLSYRIYTKSLDPKKNPNIKLSNSYIQKHLPGSDIAQNRGKMRE--FMQYDK 747
Query: 857 NGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRLKHLGITQLTLPASISSAM 916
W +P E +R PE +C ++MQ G+ +L+ G A ++
Sbjct: 748 ETSS-WKPMPGETVPDENQMRGWISPEDLCLVDAMQVGVRQLQDAGFA-----ADDANPE 801
Query: 917 SQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLGF 976
+EA LA PWN + NF+ +++ LE+ GVGDP+GRG G
Sbjct: 802 DDETNEAQQLA------------PWNTTRNFLEASSRR----AMLELHGVGDPTGRGEGI 845
Query: 977 SYVRAAPKA 985
S ++ + K
Sbjct: 846 SMIKTSMKG 854
>gi|154281671|ref|XP_001541648.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150411827|gb|EDN07215.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 1092
Score = 145 bits (366), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/333 (31%), Positives = 153/333 (45%), Gaps = 54/333 (16%)
Query: 660 LSVKDG-HVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLT 718
LS+ D +V L+EY EE P ++SN GMG+ L YY++ + D A +G
Sbjct: 536 LSLSDNSNVLLLEYSEEHPTMMSNFGMGSRLINYYRRKNMEDPA-----RPKAEIGETAV 590
Query: 719 LEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKG----KISIR 772
L P DKSPF G I G + +++ T M+RAPVF + TDFL++R++ G IR
Sbjct: 591 LLPQDKSPFSIFGHIDPGETSAAITTAMFRAPVFQQEPKPTDFLVIRNSTGIDGSSYYIR 650
Query: 773 RIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSV 832
I+ + VV QQ P ++V P S+ + T S NR+ + YR K
Sbjct: 651 NIENLYVVGQQFPSVDVPGPHSRKVTTASKNRLKMICYRLLKRNKKHR------------ 698
Query: 833 QFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQ 892
R+K+KE FL+ + K+ W MK IP E LR PE +C E+MQ
Sbjct: 699 ---------NRQKMKE--FLQFSKDHKE-WEMKPGDPIPDEDVLRGYVKPEDICLLEAMQ 746
Query: 893 AGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTN 952
G L G + + E Q+ PW + NF+ T
Sbjct: 747 VGQQHLHDAGYDRDE--------------DDADDDEKEGESSEQQLAPWKTTRNFLLAT- 791
Query: 953 QDRENIERLEITGVGDPSGRGLGFSYVRAAPKA 985
+ L++ G GDP+GRG GFS+++ + K
Sbjct: 792 ---QGKAMLQLHGEGDPTGRGEGFSFIKTSMKG 821
>gi|452987764|gb|EME87519.1| hypothetical protein MYCFIDRAFT_105631, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 1140
Score = 145 bits (366), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 114/371 (30%), Positives = 168/371 (45%), Gaps = 47/371 (12%)
Query: 654 FKKKSDLSVKD-GHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNC 712
F K DLS+ D + L+EY EE P+ LSN GMG YY+K DQ
Sbjct: 534 FAKAEDLSLGDSASILLLEYSEEAPMTLSNFGMGNRFINYYRKLDADDQ-----TRPKEP 588
Query: 713 LGNVLTLEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSA---KG 767
+G L P DKSPF G + G + +++ +YRAPVF+HK TDF++ S+ +G
Sbjct: 589 IGEAQVLLPQDKSPFANFGHVDKGETVPTIQNGLYRAPVFSHKPKPTDFIIGISSTYERG 648
Query: 768 -KISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIG 826
+ +R ++ + V QQ PL EV S+ + + R+ YR ++ + R +
Sbjct: 649 DTLYLRNVENLHTVGQQFPLAEVPGQHSRKVTDAAKKRLRALSYRIYAKSQTRK-DKVLD 707
Query: 827 VDELSVQFPNLSEAIIRKKLKECAFLR------RDGNGKQVWSMKRTFHIPSEGDLRKLA 880
L P R K++E F++ R W + +P LR
Sbjct: 708 NATLMPHLPGHDMPQTRSKMRE--FMKYERAPGRSEGTTGTWVPQPGHPVPDADTLRSWI 765
Query: 881 YPEHVCSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITP 940
PE VC ++MQ G+ L +GIT+ S+ D + ++I ELQ+ P
Sbjct: 766 RPEDVCLLDAMQVGVQHLADIGITE-----------SKDGDGEGDIEEGANI--ELQLAP 812
Query: 941 WNLSSNFV-ACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKA-------SVSSAMV 992
W + NF+ AC + L + G GDP+G GLGFS+V+ + K S S M
Sbjct: 813 WRATKNFLNACQGK-----AMLTLHGDGDPTGHGLGFSFVKTSMKGGFQAQGESASDKMD 867
Query: 993 KKKAAANRGGS 1003
KK N G S
Sbjct: 868 AKKRKDNGGHS 878
>gi|406601612|emb|CCH46777.1| putative transcription initiation factor TFIID [Wickerhamomyces
ciferrii]
Length = 942
Score = 145 bits (365), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/343 (30%), Positives = 170/343 (49%), Gaps = 55/343 (16%)
Query: 654 FKKKSDLSVKD-GHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNC 712
F K +DLS+ D G LME+ E+ P++L N GMG+ L YY+K D + L
Sbjct: 466 FAKTTDLSLGDTGQTLLMEHSEQVPIVLPNFGMGSKLLNYYRKKDEEDTSRPKL-----A 520
Query: 713 LGNVLTLEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKIS 770
+G L DKSPF G ++ G +L + RAPVF H+ +TDFLL++S G IS
Sbjct: 521 IGETHVLGVQDKSPFWNFGFVEPGNIVPTLYNKLTRAPVFKHEAKSTDFLLIKSTGGGIS 580
Query: 771 ----IRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIG 826
++ I+ + VV Q P++++ P S+ + T S NR+ + V+R + +R LL
Sbjct: 581 QKYFLKSINNLFVVGQLFPVVDIPGPHSRKVTTASKNRLKMIVFRVLKRSPERRLL---- 636
Query: 827 VDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVC 886
V ++S+ FP+ ++ R++LKE +R G+ + W +K +PS+ +L PE +
Sbjct: 637 VRDISIHFPDQNDMQNRQRLKEFMEYQRSGDDQGFWKLKE--ELPSD----RLISPEDLT 690
Query: 887 SYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSN 946
E+MQ +H+ E + + I EL + WNLS N
Sbjct: 691 LLEAMQVA---QQHM--------------------EDLEFYSNEDINDELAL--WNLSKN 725
Query: 947 FVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSS 989
F+ T + L+++ GDP G+ FS+++ + K S
Sbjct: 726 FINAT----QGKAMLQLS--GDPEGK--AFSFMKTSMKGGFKS 760
>gi|389632893|ref|XP_003714099.1| transcription initiation factor TFIID subunit 1, variant [Magnaporthe
oryzae 70-15]
gi|351646432|gb|EHA54292.1| transcription initiation factor TFIID subunit 1, variant [Magnaporthe
oryzae 70-15]
Length = 1074
Score = 145 bits (365), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 109/364 (29%), Positives = 170/364 (46%), Gaps = 37/364 (10%)
Query: 653 AFKKKSDLSVKDG-HVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNN 711
F DL++ D +V L EY E+ P +LS GMG + + +K + +++
Sbjct: 527 TFSSSKDLTLNDNSYVVLFEYSEQIPTVLSKFGMGNKIVNHARKRINTEDESSVVDKKVY 586
Query: 712 CLG--NVLTLEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKG 767
LG N+LT E DKSPF G ++ G +L MY AP+F H+ TDF+L RS G
Sbjct: 587 ELGEENILTTE--DKSPFSTFGRVEQGEVVPTLTNAMYHAPIFKHQPRKTDFILGRSTTG 644
Query: 768 K----ISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLP 823
K +R+ID + VV Q P MEV P S+ + T S NRM + YR +
Sbjct: 645 KEGPFYYLRKIDHLYVVGQNFPSMEVPGPHSRKVTTLSKNRMKMIAYRLIHSKG------ 698
Query: 824 CIGVDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPE 883
+ + E++ ++ R+KLKE FL D N K W +K + + + + K+ PE
Sbjct: 699 AVELPEMTKHVKGSTDPQNRQKLKE--FLSYDKNIK-AWKIKESDTLLDKDSIDKMIKPE 755
Query: 884 HVCSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNL 943
VC ++ Q G L G T +S++ + L + ++PWN
Sbjct: 756 DVCLNDAHQVGAGELLINGYT-----------VSKVEENDHDLDDGNEQSFAKSMSPWNT 804
Query: 944 SSNFV-ACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGG 1002
+ F+ AC + + + G GDP+G GLGFS+++ + K A+ K + N
Sbjct: 805 TKAFIDACAGK-----AMVRLRGPGDPTGHGLGFSFIKTSMKGGYMEALQKDRGPGNTAN 859
Query: 1003 STVT 1006
+T
Sbjct: 860 DAMT 863
>gi|389632895|ref|XP_003714100.1| transcription initiation factor TFIID subunit 1 [Magnaporthe oryzae
70-15]
gi|351646433|gb|EHA54293.1| transcription initiation factor TFIID subunit 1 [Magnaporthe oryzae
70-15]
Length = 1157
Score = 144 bits (363), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 109/364 (29%), Positives = 170/364 (46%), Gaps = 37/364 (10%)
Query: 653 AFKKKSDLSVKDG-HVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNN 711
F DL++ D +V L EY E+ P +LS GMG + + +K + +++
Sbjct: 527 TFSSSKDLTLNDNSYVVLFEYSEQIPTVLSKFGMGNKIVNHARKRINTEDESSVVDKKVY 586
Query: 712 CLG--NVLTLEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKG 767
LG N+LT E DKSPF G ++ G +L MY AP+F H+ TDF+L RS G
Sbjct: 587 ELGEENILTTE--DKSPFSTFGRVEQGEVVPTLTNAMYHAPIFKHQPRKTDFILGRSTTG 644
Query: 768 K----ISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLP 823
K +R+ID + VV Q P MEV P S+ + T S NRM + YR +
Sbjct: 645 KEGPFYYLRKIDHLYVVGQNFPSMEVPGPHSRKVTTLSKNRMKMIAYRLIHSKG------ 698
Query: 824 CIGVDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPE 883
+ + E++ ++ R+KLKE FL D N K W +K + + + + K+ PE
Sbjct: 699 AVELPEMTKHVKGSTDPQNRQKLKE--FLSYDKNIK-AWKIKESDTLLDKDSIDKMIKPE 755
Query: 884 HVCSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNL 943
VC ++ Q G L G T +S++ + L + ++PWN
Sbjct: 756 DVCLNDAHQVGAGELLINGYT-----------VSKVEENDHDLDDGNEQSFAKSMSPWNT 804
Query: 944 SSNFV-ACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGG 1002
+ F+ AC + + + G GDP+G GLGFS+++ + K A+ K + N
Sbjct: 805 TKAFIDACAGK-----AMVRLRGPGDPTGHGLGFSFIKTSMKGGYMEALQKDRGPGNTAN 859
Query: 1003 STVT 1006
+T
Sbjct: 860 DAMT 863
>gi|440474259|gb|ELQ43011.1| transcription initiation factor TFIID subunit 1 [Magnaporthe oryzae
Y34]
gi|440481188|gb|ELQ61798.1| transcription initiation factor TFIID subunit 1 [Magnaporthe oryzae
P131]
Length = 1184
Score = 144 bits (362), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 109/364 (29%), Positives = 170/364 (46%), Gaps = 37/364 (10%)
Query: 653 AFKKKSDLSVKDG-HVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNN 711
F DL++ D +V L EY E+ P +LS GMG + + +K + +++
Sbjct: 527 TFSSSKDLTLNDNSYVVLFEYSEQIPTVLSKFGMGNKIVNHARKRINTEDESSVVDKKVY 586
Query: 712 CLG--NVLTLEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKG 767
LG N+LT E DKSPF G ++ G +L MY AP+F H+ TDF+L RS G
Sbjct: 587 ELGEENILTTE--DKSPFSTFGRVEQGEVVPTLTNAMYHAPIFKHQPRKTDFILGRSTTG 644
Query: 768 K----ISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLP 823
K +R+ID + VV Q P MEV P S+ + T S NRM + YR +
Sbjct: 645 KEGPFYYLRKIDHLYVVGQNFPSMEVPGPHSRKVTTLSKNRMKMIAYRLIHSKG------ 698
Query: 824 CIGVDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPE 883
+ + E++ ++ R+KLKE FL D N K W +K + + + + K+ PE
Sbjct: 699 AVELPEMTKHVKGSTDPQNRQKLKE--FLSYDKNIK-AWKIKESDTLLDKDSIDKMIKPE 755
Query: 884 HVCSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNL 943
VC ++ Q G L G T +S++ + L + ++PWN
Sbjct: 756 DVCLNDAHQVGAGELLINGYT-----------VSKVEENDHDLDDGNEQSFAKSMSPWNT 804
Query: 944 SSNFV-ACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGG 1002
+ F+ AC + + + G GDP+G GLGFS+++ + K A+ K + N
Sbjct: 805 TKAFIDACAGK-----AMVRLRGPGDPTGHGLGFSFIKTSMKGGYMEALQKDRGPGNTAN 859
Query: 1003 STVT 1006
+T
Sbjct: 860 DAMT 863
>gi|83766890|dbj|BAE57030.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 1082
Score = 143 bits (361), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 158/337 (46%), Gaps = 37/337 (10%)
Query: 660 LSVKDGHV-FLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLT 718
LS+ D L+EY EE P++LSN GM + YY++ + D +G
Sbjct: 547 LSLADNSTALLVEYSEEVPVMLSNFGMSNRIINYYRRKNMDDP-----TRPKAEIGETAV 601
Query: 719 LEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGK----ISIR 772
L P DKSPF G + G ++ +MYRAP+F H+ TDFL++RS+ G IR
Sbjct: 602 LLPQDKSPFSIFGHVDPGEITPAISNSMYRAPLFQHETKPTDFLIIRSSTGSGGSDYFIR 661
Query: 773 RIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSV 832
I+ + V QQ P ++V P S+ + T + NRM + VYR + L + +++
Sbjct: 662 NIENLFVAGQQFPSVDVPGPHSRKVTTVAKNRMKMLVYRLLKKSPDLRL----SISDVTA 717
Query: 833 QFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQ 892
P S+ R+K+K+ FL+ D + K ++ +P + +R PE VC ESMQ
Sbjct: 718 HIPGTSDMQNRQKVKD--FLQHDKDSKYWVPLE---PVPEQDVIRSWVQPEDVCLLESMQ 772
Query: 893 AGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTN 952
G L G + + DE E Q+ PW + NF+ +
Sbjct: 773 VGQQHLHDTGYGN-----DAETGGDEDNDEETE-------SFEQQMAPWKATRNFLLAS- 819
Query: 953 QDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSS 989
+ L++ G GDP+GRG GFS+++ + K +
Sbjct: 820 ---QGKAMLKLHGEGDPTGRGEGFSFIKTSMKGGFKA 853
>gi|317142703|ref|XP_001819032.2| trimethylguanosine synthase [Aspergillus oryzae RIB40]
gi|391863946|gb|EIT73245.1| transcription initiation factor TFIID, subunit TAF1 [Aspergillus
oryzae 3.042]
Length = 1111
Score = 143 bits (361), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 158/337 (46%), Gaps = 37/337 (10%)
Query: 660 LSVKDGHV-FLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLT 718
LS+ D L+EY EE P++LSN GM + YY++ + D +G
Sbjct: 547 LSLADNSTALLVEYSEEVPVMLSNFGMSNRIINYYRRKNMDDP-----TRPKAEIGETAV 601
Query: 719 LEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGK----ISIR 772
L P DKSPF G + G ++ +MYRAP+F H+ TDFL++RS+ G IR
Sbjct: 602 LLPQDKSPFSIFGHVDPGEITPAISNSMYRAPLFQHETKPTDFLIIRSSTGSGGSDYFIR 661
Query: 773 RIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSV 832
I+ + V QQ P ++V P S+ + T + NRM + VYR + L + +++
Sbjct: 662 NIENLFVAGQQFPSVDVPGPHSRKVTTVAKNRMKMLVYRLLKKSPDLRL----SISDVTA 717
Query: 833 QFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQ 892
P S+ R+K+K+ FL+ D + K ++ +P + +R PE VC ESMQ
Sbjct: 718 HIPGTSDMQNRQKVKD--FLQHDKDSKYWVPLE---PVPEQDVIRSWVQPEDVCLLESMQ 772
Query: 893 AGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTN 952
G L G + + DE E Q+ PW + NF+ +
Sbjct: 773 VGQQHLHDTGYGN-----DAETGGDEDNDEETE-------SFEQQMAPWKATRNFLLAS- 819
Query: 953 QDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSS 989
+ L++ G GDP+GRG GFS+++ + K +
Sbjct: 820 ---QGKAMLKLHGEGDPTGRGEGFSFIKTSMKGGFKA 853
>gi|238501562|ref|XP_002382015.1| transcription factor TFIID complex 145 kDa subunit, putative
[Aspergillus flavus NRRL3357]
gi|220692252|gb|EED48599.1| transcription factor TFIID complex 145 kDa subunit, putative
[Aspergillus flavus NRRL3357]
Length = 1162
Score = 143 bits (361), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 158/337 (46%), Gaps = 37/337 (10%)
Query: 660 LSVKDGHV-FLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLT 718
LS+ D L+EY EE P++LSN GM + YY++ + D +G
Sbjct: 547 LSLADNSTALLVEYSEEVPVMLSNFGMSNRIINYYRRKNMDDP-----TRPKAEIGETAV 601
Query: 719 LEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGK----ISIR 772
L P DKSPF G + G ++ +MYRAP+F H+ TDFL++RS+ G IR
Sbjct: 602 LLPQDKSPFSIFGHVDPGEITPAISNSMYRAPLFQHETKPTDFLIIRSSTGSGGSDYFIR 661
Query: 773 RIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSV 832
I+ + V QQ P ++V P S+ + T + NRM + VYR + L + +++
Sbjct: 662 NIENLFVAGQQFPSVDVPGPHSRKVTTVAKNRMKMLVYRLLKKSPDLRL----SISDVTA 717
Query: 833 QFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQ 892
P S+ R+K+K+ FL+ D + K ++ +P + +R PE VC ESMQ
Sbjct: 718 HIPGTSDMQNRQKVKD--FLQHDKDSKYWVPLE---PVPEQDVIRSWVQPEDVCLLESMQ 772
Query: 893 AGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTN 952
G L G + + DE E Q+ PW + NF+ +
Sbjct: 773 VGQQHLHDTGYGN-----DAETGGDEDNDEETE-------SFEQQMAPWKATRNFLLAS- 819
Query: 953 QDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSS 989
+ L++ G GDP+GRG GFS+++ + K +
Sbjct: 820 ---QGKAMLKLHGEGDPTGRGEGFSFIKTSMKGGFKA 853
>gi|26341442|dbj|BAC34383.1| unnamed protein product [Mus musculus]
Length = 360
Score = 143 bits (360), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 92/264 (34%), Positives = 136/264 (51%), Gaps = 35/264 (13%)
Query: 862 WSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPD 921
W +K F +P+E ++R + PE C+Y SM A RLK G + + A P+
Sbjct: 6 WVLKSDFRLPTEEEIRAMVSPEQCCAYYSMIAAEQRLKDAGYGEKSFFA---------PE 56
Query: 922 EAIALAAASHIERELQITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRA 981
E I+ E++ PWN + F+A + LE+TGV DP+G G GFSYV+
Sbjct: 57 EENEEDFQMKIDDEVRTAPWNTTRAFIAAM----KGKCLLEVTGVADPTGCGEGFSYVKI 112
Query: 982 APKASVSSAMVKKKAAANRGGSTVTGTDADLRRLSMEAAREVLLKFNVPEEMIAKQTRWH 1041
K + K TVTGTDADLRRLS++ A+++L KF VPEE I K +RW
Sbjct: 113 PNKPTQQ----KDDKEPQPVKKTVTGTDADLRRLSLKNAKQLLRKFGVPEEEIKKLSRWE 168
Query: 1042 RIAMIRKLSSEQAASG---------------VQLQQQTRGKCQEIWDRQVQSLSAAD--- 1083
I ++R +S+EQA SG + Q++ + +CQ I+D Q + LS+ +
Sbjct: 169 VIDVVRTMSTEQARSGEGPMSKFARGSRFSVAEHQERYKEECQRIFDLQNKVLSSTEVLS 228
Query: 1084 DDEIGSDSEHSDLDSFAGDLENLL 1107
D S +E SD + ++EN+L
Sbjct: 229 TDTDSSSAEDSDFEEMGKNIENML 252
>gi|302848683|ref|XP_002955873.1| hypothetical protein VOLCADRAFT_96746 [Volvox carteri f. nagariensis]
gi|300258841|gb|EFJ43074.1| hypothetical protein VOLCADRAFT_96746 [Volvox carteri f. nagariensis]
Length = 2526
Score = 142 bits (359), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/381 (27%), Positives = 178/381 (46%), Gaps = 38/381 (9%)
Query: 712 CLGNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISI 771
G +L + +PF + G + ++T+M++AP H T+DFLLVR++ G + +
Sbjct: 1150 AFGTRASLTGPENTPFYTVLPPGHTAMCVDTHMFKAPAAPHDPRTSDFLLVRTSNGVLHL 1209
Query: 772 RRIDKVAVVAQQEPLMEVMSP-GSKNLQTYSINRMLVNVYREFSAAAKR--GLLPCIGVD 828
R + V QQ P V P ++ ++ Y+ NR+ V V R A R P I +
Sbjct: 1210 RELTGTLTVGQQHPHERVPEPWDTEWIKNYNSNRIFVVVARALQRARTRHPNAKPSIALK 1269
Query: 829 ELSVQFPNLSEAIIRKKL-KECAFLRRDGNGKQV-------------------WSMKRTF 868
+++ Q P++ IR +L KEC ++ G + +
Sbjct: 1270 DVADQLPHIPRDEIRARLEKECGCRLKEKEGAAATAAMNGINGGVVAVSDNPEYELPEGV 1329
Query: 869 HIPSEGDLRKLAYPEHVCSYESMQAGLYRLKHLGITQLTL--------PASISSAMSQLP 920
+ E LR++ P+ VC+YE+M++ RLK LG+ L P +A+ QL
Sbjct: 1330 PVTEEAKLREMLRPDVVCAYEAMRSSELRLKGLGLQHLQALTAVARMEPERWQAAIRQLA 1389
Query: 921 D-EAIALAAASHIERELQITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYV 979
+ A A I+ + PW + ++ + T D L + G DP+GRG G +
Sbjct: 1390 ELNPKAGPALRLIDWAVNTAPWVTTGSYASATRGDTRGSTWLRVEGPFDPTGRGYGLCF- 1448
Query: 980 RAAPKASVSSAMVKKKAAANRGGSTVTGTDADLRRLSMEAAREVLLKFNVPEEMI-AKQT 1038
A V+ +K K ++TGT+ADLR+L E A +L+++ V ++++ A
Sbjct: 1449 -QADWQRVTRPDLKDKPPQE---GSITGTEADLRKLGHEEAGRMLMQWGVKKDVVDAMTN 1504
Query: 1039 RWHRIAMIRKLSSEQAASGVQ 1059
RW RI ++RKL+++ A G +
Sbjct: 1505 RWRRIDLVRKLATQAAMEGTE 1525
>gi|212529038|ref|XP_002144676.1| transcription factor TFIID complex 145 kDa subunit, putative
[Talaromyces marneffei ATCC 18224]
gi|210074074|gb|EEA28161.1| transcription factor TFIID complex 145 kDa subunit, putative
[Talaromyces marneffei ATCC 18224]
Length = 1109
Score = 142 bits (357), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 148/329 (44%), Gaps = 39/329 (11%)
Query: 667 VFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLTLEPGDKSP 726
V L+EY EE P+++SN GM + YY++ + D +G L P DKSP
Sbjct: 558 VMLLEYSEEVPMMMSNFGMANRVVNYYRRKNTDDP-----TRPKAEIGETQVLLPQDKSP 612
Query: 727 F--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGK----ISIRRIDKVAVV 780
F G I G + ++ MYRAP+F H+ +TDFL++R + ++ ++ + V
Sbjct: 613 FSIFGHIDPGETTPAITNTMYRAPIFNHQPKSTDFLVIRGSTATNGSDYFLKNVENLYAV 672
Query: 781 AQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLSEA 840
QQ P ++ P S+ + T + NR+ + +R A + + +++ P S+
Sbjct: 673 GQQLPSTDIPGPHSRKVTTVAKNRLKMLTFRLMKKAGNL----QVSISQVTAHLPGSSDM 728
Query: 841 IIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRLKH 900
R+K+K+ F+ D + K W IP +R PE VC ESMQ GL L
Sbjct: 729 QNRQKMKD--FVHHDKDSK-TWV--PIGQIPDSETIRSWIQPEDVCLLESMQVGLQHLHD 783
Query: 901 LGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENIER 960
G T + E Q+ PW + NF+ + +
Sbjct: 784 TGHTNGADEEDEEAEGESF---------------EQQMAPWRATRNFMMAS----QGKAM 824
Query: 961 LEITGVGDPSGRGLGFSYVRAAPKASVSS 989
L++ G GDP+GRG GFS+++ + K +
Sbjct: 825 LKLHGEGDPTGRGEGFSFIKTSMKGGFQA 853
>gi|453089705|gb|EMF17745.1| hypothetical protein SEPMUDRAFT_146708 [Mycosphaerella populorum
SO2202]
Length = 1165
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 106/348 (30%), Positives = 159/348 (45%), Gaps = 35/348 (10%)
Query: 654 FKKKSDLSVKD-GHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNC 712
F K DLS+ D + L+EY EE P++LSN GMG L YY+K DQ
Sbjct: 547 FAKAEDLSLGDSASMLLLEYAEEAPMMLSNFGMGNRLINYYRKQHADDQERG----EKKD 602
Query: 713 LGNVLTLEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAK---- 766
+G L DKSPF G + G + +L+ +YRAPVF+H TDF++ S+
Sbjct: 603 IGEAQVLLTQDKSPFSNFGHVDKGETVPTLQNGLYRAPVFSHAPKQTDFVIGISSTYEGG 662
Query: 767 GKISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIG 826
+ +R ++ + V QQ P EV S+ + + R+ YR ++ + R +
Sbjct: 663 DRFFLRNVENLHAVGQQFPFAEVPGQHSRRVTDAAKKRLRALSYRIYTKSLTR-RDKVLD 721
Query: 827 VDELSVQFPNLSEAIIRKKLKECAFLRR---DGNGKQ-VWSMKRTFHIPSEGDLRKLAYP 882
L P R K++E R G+G VW + +P LR P
Sbjct: 722 NASLMPHLPGHDMPQTRSKMREFMKYERVTTRGDGSTGVWVPQPGHPVPDAETLRGWIRP 781
Query: 883 EHVCSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWN 942
E VC +SMQ G+ L LGI++ +E + ++I ELQ+ PW
Sbjct: 782 EDVCLLDSMQVGVQHLTDLGISE-----------GDKGEEEKDIDEGANI--ELQLAPWR 828
Query: 943 LSSNFV-ACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSS 989
S NF+ AC + L++ G GDP+G+GL FS+V+ + K +
Sbjct: 829 ASKNFLNACQGK-----AMLKLHGDGDPTGQGLAFSFVKTSMKGGFQA 871
>gi|242764668|ref|XP_002340821.1| transcription factor TFIID complex 145 kDa subunit, putative
[Talaromyces stipitatus ATCC 10500]
gi|218724017|gb|EED23434.1| transcription factor TFIID complex 145 kDa subunit, putative
[Talaromyces stipitatus ATCC 10500]
Length = 1112
Score = 141 bits (355), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 98/343 (28%), Positives = 164/343 (47%), Gaps = 38/343 (11%)
Query: 654 FKKKSDLSVKDGH-VFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNC 712
+ LS+ D V L+EY EE P+++SN GM + YY++ + D
Sbjct: 545 YNSTKSLSLADNSTVLLLEYSEEVPMMMSNFGMANRVVNYYRRKNTDDP-----TRPKAE 599
Query: 713 LGNVLTLEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAK---- 766
+G L P DKSPF G I G + ++ MYRAP+F+H+ +TDFL+V+
Sbjct: 600 IGETQVLLPQDKSPFSIFGHIDPGETAPAITNTMYRAPIFSHQPKSTDFLVVKGTTQTDG 659
Query: 767 GKISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIG 826
++ I+ + VV QQ P ++ P S+ + T + NR+ + +R K G + +
Sbjct: 660 SSFFLKNIENLYVVGQQFPSTDIPGPHSRKVTTVAKNRLKMLTFR---LMKKDGNM-QVS 715
Query: 827 VDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVC 886
+++++ P ++ R+K+K+ +D ++W + IP +R PE VC
Sbjct: 716 INQVTAHLPGSTDMQNRQKMKDFVSHNKD---TKMW-VPPEGPIPDSDTIRSWIQPEDVC 771
Query: 887 SYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSN 946
ESMQ GL L G ++A + D+ A +S E Q+ PW S N
Sbjct: 772 LLESMQVGLQHLHDTG--------HFNAAEN---DDEEAEGDSSF---EQQMAPWRASRN 817
Query: 947 FVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSS 989
F+ + + L++ G GDP+GRG GFS+++ + K +
Sbjct: 818 FIMAS----QGKAMLKLHGEGDPTGRGEGFSFIKTSMKGGFQA 856
>gi|402077905|gb|EJT73254.1| transcription initiation factor TFIID subunit 1 [Gaeumannomyces
graminis var. tritici R3-111a-1]
Length = 1184
Score = 140 bits (354), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 112/380 (29%), Positives = 179/380 (47%), Gaps = 45/380 (11%)
Query: 653 AFKKKSDLSVKDGHV-FLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNN 711
AF DL++ D L EYCE+ P +LS GMG + + +K + D L+
Sbjct: 555 AFASSKDLTLSDNSTAVLFEYCEQVPTVLSKFGMGNKIINHARKKANTDDDTTLIDKKQY 614
Query: 712 CLG--NVLTLEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKG 767
LG N+L E DKSPF G + G +L+ M++AP+F HK +DFL RS G
Sbjct: 615 ELGEPNILLTE--DKSPFSIFGRVDHGEVVPTLQNAMFQAPIFKHKPRRSDFLCGRSHTG 672
Query: 768 ----KISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLP 823
+R+ID + VV Q P MEV P S+ + T S NRM + +R +
Sbjct: 673 AGGSNYYVRKIDHLYVVGQNFPTMEVPGPHSRRVTTLSKNRMKMISFRLIHSKGH----- 727
Query: 824 CIGVDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPE 883
+ + +++ N ++A R+KLKE R+ + W++K + + + K+ PE
Sbjct: 728 -VALQDITHHVKNSTDAQNRQKLKEFLSYERE---TKSWNIKENDQLMDKDSIDKMIKPE 783
Query: 884 HVCSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNL 943
VC ++ Q G + L + T+ SA +L D+ + A + PW
Sbjct: 784 EVCLNDAHQVG---VGELLVNGYTVSRVDDSADQELGDDNNDASFAK------SMAPWFT 834
Query: 944 SSNFV-ACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGG 1002
+ F+ AC + + + G GDP+G GLGFS+++ + K A+ + +RG
Sbjct: 835 TKAFIDACAGK-----AMVRLRGPGDPTGHGLGFSFIKTSMKGGYMEALQR-----DRGP 884
Query: 1003 STVTGTDADLRRLSMEAARE 1022
T T AD +++EA R+
Sbjct: 885 GT---TSAD--SMALEAQRK 899
>gi|425767776|gb|EKV06332.1| Transcription factor TFIID complex 145 kDa subunit, putative
[Penicillium digitatum Pd1]
gi|425769458|gb|EKV07950.1| Transcription factor TFIID complex 145 kDa subunit, putative
[Penicillium digitatum PHI26]
Length = 1116
Score = 139 bits (350), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 164/369 (44%), Gaps = 50/369 (13%)
Query: 642 PGENKSLRPPGAFKKK--------------SDLSVKDG-HVFLMEYCEERPLLLSNAGMG 686
PG+ + P F++K LS+ D +V L+EY EE P+ L+N GM
Sbjct: 527 PGQTSWFKNPAQFRRKHLRGKDAKTVYDSTKSLSMGDNSNVLLVEYSEELPMTLANFGMC 586
Query: 687 ANLCTYYQKSSPGDQAGALLCSGNNCLGNVLTLEPGDKSPF--LGDIKAGCSQSSLETNM 744
YY++ + D +G + L P DKSP+ G + G ++ +M
Sbjct: 587 NRFINYYRRKNIDDP-----TRPRADIGETVVLLPQDKSPYSIFGHVDPGEISPAISNSM 641
Query: 745 YRAPVFTHKVATTDFLLVRSAKGK----ISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTY 800
YRAP+F H+ +TDFL+VR+ G +R I+ V QQ P +++ P S+ + T
Sbjct: 642 YRAPLFPHQPKSTDFLVVRNTTGSEGCHYYLRNIENFYVAGQQFPSVDIPGPHSRKVTTV 701
Query: 801 SINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQ 860
+ NRM + VYR + L + +++ PN ++ R+K+K+ FL+ D + K
Sbjct: 702 AKNRMKMLVYRLLKKSPDERL----AISDVTAHIPNTTDMQNRQKVKD--FLQHDKDTKY 755
Query: 861 VWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRLKHLGITQLTLPASISSAMSQLP 920
+ +P + +R PE VC ESMQ G L G +
Sbjct: 756 WKPLDPV--LPDQDTIRSWVQPEDVCLLESMQIGQQHLHDTGYG------------NDAE 801
Query: 921 DEAIALAAASHIERELQITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVR 980
E Q+ PW + NF+ + + L++ G GDP+GRG G+++++
Sbjct: 802 TGGENEEDEELESFEQQMAPWKATRNFLLAS----QGKAMLKLHGEGDPTGRGEGYNFIK 857
Query: 981 AAPKASVSS 989
+ K +
Sbjct: 858 TSMKGGFKA 866
>gi|397623315|gb|EJK66952.1| hypothetical protein THAOC_12070, partial [Thalassiosira oceanica]
Length = 1495
Score = 138 bits (348), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 124/454 (27%), Positives = 203/454 (44%), Gaps = 108/454 (23%)
Query: 726 PFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLV----RSAKGK------------I 769
PF+G+++ G +Q+ L +N++ AP++ H+ TDFL+V R K +
Sbjct: 626 PFIGEVEDGQTQTGLISNLFAAPMYRHESDPTDFLMVLGQLRETKTTGPLTADAMAGLGV 685
Query: 770 SIRRIDK-VAVVAQQEPLMEVMSPGS-------KNLQTYSINRML-VNVYREFSAAAKRG 820
++R + + V V Q +P ++V P + +N Y I + + N RE +
Sbjct: 686 ALRPLPRNVYCVGQTQPRVKVFQPNTNDEKKFFRNFVAYHIAKTIERNELREGTG----- 740
Query: 821 LLPCIGVDELSVQ-FPN--LSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFH--IPSEGD 875
+ +D+++ + F N L IR +K A R N W++K+ P
Sbjct: 741 ----LRIDDVNDRLFVNTVLPAQQIRAIIKAVANCERQNN--NYWALKQVGEDDFPGVEA 794
Query: 876 LRKLAYPEHVCSYESMQAGLYRLKHLGITQ---------------LTLPASISSAM---- 916
L + PE + +YES QA + R + LGI + + L + +A
Sbjct: 795 LGRRVNPEGIAAYESQQAAIQRYQDLGICELYSGTNNVGNVAVAMIYLNGMVQAAFQRRS 854
Query: 917 ----------------------------SQLPDEAIALAAASHIERELQITPWNLSSNFV 948
Q D + A I ELQ++PWNLS +F+
Sbjct: 855 RLKKLLDVKARQRDPRLVYYERAHAKLDGQYHDLKRKQSIAKFIYEELQLSPWNLSGDFI 914
Query: 949 ACTNQDRENIERLEITGVGDPSGRGLGFSYVRA-APKASVSSAMVKKKAAANRGGSTVTG 1007
+ N + +++TG+GDPSGRG +S++R + S SSA V A N +TG
Sbjct: 915 DVHKRAIRN-QTMKLTGIGDPSGRGEAYSFLREEGGRGSKSSAAVD--GALNAQIKKITG 971
Query: 1008 TDADLRRLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASGV--------- 1058
T+ DLR+L+M+ +L +NVP + I K RW R+ +IR LS++ A+ G+
Sbjct: 972 TENDLRKLTMKQMASLLQSYNVPSKDIEKLKRWDRVHVIRDLSTKNASDGMGDEMDRFAR 1031
Query: 1059 ----QLQQQT---RGKCQEIWDRQVQSLSAADDD 1085
+L Q + + QEIW RQ +L+A D D
Sbjct: 1032 TEKTRLSDQRSNYKERIQEIWRRQTAALTATDID 1065
>gi|255932975|ref|XP_002557958.1| Pc12g11400 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211582577|emb|CAP80767.1| Pc12g11400 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1115
Score = 138 bits (348), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/337 (29%), Positives = 160/337 (47%), Gaps = 36/337 (10%)
Query: 660 LSVKDG-HVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLT 718
LS+ D +V L+EY EE P+ L+N GM YY++ + D +G +
Sbjct: 558 LSMGDNSNVLLVEYSEEMPMTLANFGMCNRFINYYRRKNIDDP-----TRPRADIGETVV 612
Query: 719 LEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGK----ISIR 772
L P DKSP+ G + G ++ +MYRAP+F H+ +TDFL+VR+ G+ +R
Sbjct: 613 LLPQDKSPYSIFGHVDPGEISPAISNSMYRAPLFPHQTKSTDFLVVRNTTGQNGSTYYLR 672
Query: 773 RIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSV 832
I+ V QQ P +++ P S+ + T + NRM + VYR + L + +++
Sbjct: 673 NIENFYVAGQQFPSVDIPGPHSRKVTTVAKNRMKMLVYRLLKKSPDERL----AISDVTA 728
Query: 833 QFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQ 892
PN ++ R+K+K+ FL+ D + K W +P + +R PE VC ESMQ
Sbjct: 729 HIPNTTDMQNRQKVKD--FLQHDKDTK-YWKPLDPV-LPDQDTIRSWVQPEDVCLLESMQ 784
Query: 893 AGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTN 952
G +HL T A D S + Q+ PW + NF+ +
Sbjct: 785 IG---QQHLHDTGYGNDAETGG------DNEEDEELESFEQ---QMAPWKATRNFLLAS- 831
Query: 953 QDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSS 989
+ L++ G GDP+GRG G+++++ + K +
Sbjct: 832 ---QGKAMLKLHGEGDPTGRGEGYNFIKTSMKGGFKA 865
>gi|448080301|ref|XP_004194591.1| Piso0_005092 [Millerozyma farinosa CBS 7064]
gi|359376013|emb|CCE86595.1| Piso0_005092 [Millerozyma farinosa CBS 7064]
Length = 1124
Score = 136 bits (343), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 91/283 (32%), Positives = 146/283 (51%), Gaps = 23/283 (8%)
Query: 619 VRPNSLIHLIRTKIHLLPRAQKLPGENKSLRPPGAFKKKSDLSVKDGHVFL-MEYCEERP 677
VRP +LI+ R K R +K +++ F K SDL++ D V + MEY EE P
Sbjct: 478 VRPGTLINFSRLKT----RKRK---KDRGKTSQELFAKSSDLTMADSAVTIGMEYAEEYP 530
Query: 678 LLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLTLEPGDKSPF--LGDIKAGC 735
+LSN GMG+ L YY+K D + LG L D+SPF G ++ G
Sbjct: 531 PILSNFGMGSKLINYYRKEKDDDNSRP-----KAPLGETHILGVEDRSPFWNFGYVEKGD 585
Query: 736 SQSSLETNMYRAPVFTHKVATTDFLLVRSAKG----KISIRRIDKVAVVAQQEPLMEVMS 791
+L NM RAPVF H+ TDFLL+RS + ++ +D + V Q P +E+ +
Sbjct: 586 FVPTLYNNMVRAPVFKHEPRKTDFLLIRSQGAGNHQRYYLKALDHLFAVGQLFPSVEIPA 645
Query: 792 PGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLSEAIIRKKLKECAF 851
P S+ + S NR+ + ++R +A + + V ++S FP+ ++ R++LKE
Sbjct: 646 PHSRKVTNTSKNRLKMIIFRAMNANDESR----VSVKDISHHFPDQNDMQNRQRLKEFMD 701
Query: 852 LRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAG 894
+R G+ + W +K + +P+E +++ + PE V +SMQ G
Sbjct: 702 YQRHGDDQGYWKIKGSDSVPTENEIKAMISPEDVAMLDSMQHG 744
Score = 47.4 bits (111), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 6/65 (9%)
Query: 937 QITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSS--AMVKK 994
++ PWN + NF+ NQ + L++ G GDP+G GLG+S++R K+S S A VK+
Sbjct: 817 ELAPWNSTRNFINA-NQSKA---MLQLNGEGDPTGIGLGYSFLRVTQKSSFSPLYAPVKE 872
Query: 995 KAAAN 999
N
Sbjct: 873 NVPKN 877
>gi|409051925|gb|EKM61401.1| hypothetical protein PHACADRAFT_24603 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1323
Score = 135 bits (340), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 113/401 (28%), Positives = 182/401 (45%), Gaps = 68/401 (16%)
Query: 656 KKSDLSVKDGHVFLM-EYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLG 714
+ DLS++D F++ E+ EE P ++SN GMG+ L YY+K + D+ LG
Sbjct: 584 RTGDLSLRDTSNFVVWEFSEEHPPIISNFGMGSILVNYYRKKNEKDE-----HVPKYDLG 638
Query: 715 NVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRS---AKGKISI 771
+ +EP D+SPF+ K G N+ RAP+F HK TDFL++++ + K I
Sbjct: 639 EPIVIEPQDESPFM---KFG--------NLIRAPLFRHKPYQTDFLVIKNTIKSDTKYYI 687
Query: 772 RRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELS 831
R I + V Q P+ EV P S+ + +R+ + ++ +A+ L + L
Sbjct: 688 RDIKNLFTVGQTYPVTEVPGPHSRKITNTIKHRLQIIAFKLLQKSAEERL----KISRLM 743
Query: 832 VQFPNLSEAII-----RKK----LKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYP 882
FP+ +E + R++ L+E R G + W +K T+ IPS+ D+ K+ P
Sbjct: 744 KYFPDQNELQMPALRCRRRAYWSLQEFMEYHRRGPHQGFWRLKSTWTIPSDIDMLKMVTP 803
Query: 883 EHVCSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWN 942
E V ESMQ G L+ G + + +A ++ E Q+ PW
Sbjct: 804 EQVVLAESMQVGQRHLQDSGYSY---------------NGEVAEDDEGNLSIEQQLAPWI 848
Query: 943 LSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGG 1002
+ NF+ T L + G GDP+GRG FS+VR S+ VK
Sbjct: 849 TTKNFLFATQAK----AMLRLHGEGDPTGRGEAFSFVR----VSMKDIFVK--------- 891
Query: 1003 STVTGTDADLRRLSMEAAREVLLKFNVPEEMIAKQTRWHRI 1043
G D D + E+ + ++NV E+ + ++ RI
Sbjct: 892 ---AGEDYDQKLAEAESRPKSAHRYNVAEQQLIYKSEIERI 929
Score = 50.1 bits (118), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 6/74 (8%)
Query: 656 KKSDLSVKDGHVFLM-EYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLG 714
+ DLS++D F++ E+ EE P ++SN GMG+ L YY+K + D+ LG
Sbjct: 416 RTGDLSLRDTSNFVVWEFSEEHPPIISNFGMGSILVNYYRKKNEKDE-----HVPKYDLG 470
Query: 715 NVLTLEPGDKSPFL 728
+ +EP D+SPF+
Sbjct: 471 EPIVIEPQDESPFM 484
>gi|294659161|ref|XP_461502.2| DEHA2F26752p [Debaryomyces hansenii CBS767]
gi|202953666|emb|CAG89928.2| DEHA2F26752p [Debaryomyces hansenii CBS767]
Length = 1138
Score = 135 bits (339), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/257 (33%), Positives = 126/257 (49%), Gaps = 16/257 (6%)
Query: 654 FKKKSDLSVKDGHVFL-MEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNC 712
F K SDL+ D + MEY EE P +LSN GMG+ L YY+K D +
Sbjct: 507 FTKSSDLTTSDTSALIGMEYAEEYPQILSNFGMGSKLINYYRKEKEDDNSRPKAP----- 561
Query: 713 LGNVLTLEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKG--- 767
LG L D+SPF G + G +L NM RAPVF H TDFLLVRS
Sbjct: 562 LGETHVLGVEDRSPFWNFGHVAKGDFVPTLYNNMVRAPVFKHDTTQTDFLLVRSQGAGNH 621
Query: 768 -KISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIG 826
K +R I+ + V P +EV +P S+ + S NR+ + V+R + + +
Sbjct: 622 QKYFLRNINHLFAVGNTFPAVEVPAPHSRKVTNTSKNRLKMIVFRAMNMNDES----RVS 677
Query: 827 VDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVC 886
V ++ FP+ ++ R++LKE ++ G + W +K T +PSE ++R + PE V
Sbjct: 678 VKTIAHHFPDQNDMQNRQRLKEFMEYQKHGEDQGYWKIKNTDIVPSEDEIRSMITPEDVA 737
Query: 887 SYESMQAGLYRLKHLGI 903
+SMQ G L+ L
Sbjct: 738 LLDSMQYGQQTLEDLAF 754
Score = 49.3 bits (116), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 37/62 (59%), Gaps = 6/62 (9%)
Query: 940 PWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSS--AMVKKKAA 997
PWNL+ NFV NQ + L++ G GDP+G GLGFS+ R+ K+S + A VK+
Sbjct: 824 PWNLTRNFVNA-NQTKA---MLQLNGEGDPTGIGLGFSFFRSTQKSSFTPLFAPVKENVP 879
Query: 998 AN 999
N
Sbjct: 880 KN 881
>gi|296812883|ref|XP_002846779.1| transcription initiation factor TFIID subunit 1 [Arthroderma otae
CBS 113480]
gi|238842035|gb|EEQ31697.1| transcription initiation factor TFIID subunit 1 [Arthroderma otae
CBS 113480]
Length = 1101
Score = 133 bits (335), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 97/329 (29%), Positives = 153/329 (46%), Gaps = 54/329 (16%)
Query: 660 LSVKDG-HVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLT 718
LS+ D + L+E+ EE P +LSN GMG+ L YY+K + D + +G
Sbjct: 554 LSLADNSNALLIEHSEEYPTMLSNFGMGSRLINYYRKKNAEDPSRP-----KTEIGETAV 608
Query: 719 LEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRRIDK 776
L P DKSPF G + G + ++ T +YRAPVF + TDFL+
Sbjct: 609 LLPQDKSPFSSFGHVDPGETTPTITTGLYRAPVFRQEARNTDFLIF-------------- 654
Query: 777 VAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPN 836
P ++V P S+ + T + NR+ + YR K+ + V E++ FP+
Sbjct: 655 --------PSVDVPGPHSRKVTTAAKNRLKMICYRRI----KKNGNNRVSVAEVTEHFPD 702
Query: 837 LSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLY 896
++ R+K+KE FL+ + + K+ W MK IPSE +R PE VC E+MQ G
Sbjct: 703 STDMQNRQKMKE--FLQFNKDHKE-WEMKSGEPIPSEDVMRGYVKPEDVCLLEAMQVGQQ 759
Query: 897 RLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRE 956
+L G + + D+ E Q+ PW + +F+ + +
Sbjct: 760 QLHDAGYDRES-------------DDGDDYEGKEGESLEQQLAPWKTTRSFLLAS----Q 802
Query: 957 NIERLEITGVGDPSGRGLGFSYVRAAPKA 985
L++ G GDP+GRG GFS+++ + K
Sbjct: 803 GKAMLQLHGEGDPTGRGEGFSFIKTSMKG 831
>gi|398411608|ref|XP_003857142.1| transcription initiation factor TFIID, subunit TAF1 [Zymoseptoria
tritici IPO323]
gi|339477027|gb|EGP92118.1| transcription initiation factor TFIID, subunit TAF1 [Zymoseptoria
tritici IPO323]
Length = 1044
Score = 132 bits (332), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 110/369 (29%), Positives = 159/369 (43%), Gaps = 63/369 (17%)
Query: 654 FKKKSDLSVKDGHVFLM-EYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNC 712
F K DLS+ D LM EY EE P++LSN GMG L YY+K D L
Sbjct: 472 FAKAEDLSLGDNASLLMLEYSEEAPMMLSNFGMGNRLINYYRKKDADDSTRPKL-----E 526
Query: 713 LGNVLTLEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAK---- 766
+G L DKSPF G + G + +++ ++RAPVF H DF++ S+
Sbjct: 527 IGEAQVLLTQDKSPFANFGHVDKGDTVPTIQNGLFRAPVFQHDAKPVDFIIGISSTWEGG 586
Query: 767 GKISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIG 826
++ +R ++ + +V QQ PL EV PG + R+ + AAK+ L
Sbjct: 587 DRLYLRNVENLHIVGQQFPLAEV--PGQHS--------------RKVTDAAKKRLR---- 626
Query: 827 VDELSVQFPNLSEAIIRKKLKECA----FLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYP 882
L+ + S+ R K++E F + NG VW + +P LR P
Sbjct: 627 --ALAFRIYTKSQMGRRDKMREFMKYERFNNKGENGGGVWVPQPGNPVPDAETLRSWIRP 684
Query: 883 EHVCSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWN 942
E VC +SMQ G+ L LG+ + A ELQ+ PW
Sbjct: 685 EDVCLLDSMQVGVQHLADLGLAETKEAEEDKD------------AEEGSTNLELQLAPWR 732
Query: 943 LSSNFV-ACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKA-------SVSSAMVKK 994
+ NF+ AC + L + G GDP+ RG GFS+V+ + K SV+ + K
Sbjct: 733 ATKNFLNACQGK-----AMLTLHGEGDPTRRGEGFSFVKTSMKGGFQPIGESVNDKIASK 787
Query: 995 KAAANRGGS 1003
N G S
Sbjct: 788 SKKDNGGHS 796
>gi|164661994|ref|XP_001732119.1| hypothetical protein MGL_0712 [Malassezia globosa CBS 7966]
gi|159106021|gb|EDP44905.1| hypothetical protein MGL_0712 [Malassezia globosa CBS 7966]
Length = 1050
Score = 132 bits (331), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 134/504 (26%), Positives = 214/504 (42%), Gaps = 100/504 (19%)
Query: 527 QNRDMMEGSWLDNIIWEPVDAVGK-PKLILDLQDEQMLFEILDNKDDEH-PLLHAGA--M 582
+N ++ G W +NIIW P + +L++D+ D +M+ E + + ++ LL A A
Sbjct: 327 RNHELANGMWFENIIWNPHHPFRRFDRLLMDMNDAEMILENENTQREKQVSLLRADAPPN 386
Query: 583 IITRSAKPSDFKP--AESVKLFYLGKELEDH--KSLADQNVR---PNSLIHLIRTKIHL- 634
++ S ++ P + +++ + KE ++L VR P + L K L
Sbjct: 387 LLKSSKFAAELDPFNLSNDRMYEMSKEHRHRVRQTLGQLVVRHAWPAIKLQLPFYKTRLS 446
Query: 635 --------LPRAQ---KLP--------------GENKSLRPPGAFKKKSDLSVKDGHVFL 669
PR Q +P GE KS P DL++KD ++
Sbjct: 447 KHETRSWHRPRIQFPSNMPITFSRVRTSRKSKDGERKSKDPSEVLHSTRDLTLKDASNYI 506
Query: 670 MEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLTLEPGDKSPFL- 728
M Y ++ + S LG L+ D+SPF+
Sbjct: 507 M-YAKDDHIPRSE------------------------------LGEAFVLDITDESPFMK 535
Query: 729 -GDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKG---KISIRRIDKVAVVAQQE 784
G ++ G +Q L NM RAP+F HK + DFL +RS + +R + + VV Q
Sbjct: 536 FGSVEPGQTQPVLYNNMTRAPLFRHKPSQNDFLFIRSTTKNDVRYYLRDVPNLYVVGQTY 595
Query: 785 PLMEVMSPGSKNLQTYSINRMLVNVYR--EFSAAAKRGLLPCIGVDELSVQFPNLSEAII 842
P + P ++ + R+ + Y+ E S A + I + + FP+ +E +
Sbjct: 596 PTTPIPGPHARLVTNNIKYRLQMITYKLVEKSHAHR------IKIHRVMKYFPDQNELQM 649
Query: 843 RKKLKE-CAFLRRDGNGKQ-VWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRLKH 900
R++LKE + R+ G+ Q W +K IP E +L+KL PEH+C E MQ G L
Sbjct: 650 RQRLKEFMVYNRKSGDVHQGFWRLKPDVPIPDEAELQKLLTPEHICLVEGMQVGQRHLLD 709
Query: 901 LGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENIER 960
G T+ + A A S +E E + PW S NF+ T +
Sbjct: 710 AGFTKTA-------------EGADDDADESKLEIEQLLAPWITSKNFLHAT----QGKAM 752
Query: 961 LEITGVGDPSGRGLGFSYVRAAPK 984
L++ G GDPSGRG FS+VR + K
Sbjct: 753 LKLHGEGDPSGRGEAFSFVRVSMK 776
>gi|449297420|gb|EMC93438.1| hypothetical protein BAUCODRAFT_37114 [Baudoinia compniacensis UAMH
10762]
Length = 1179
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/340 (29%), Positives = 156/340 (45%), Gaps = 37/340 (10%)
Query: 654 FKKKSDLSVKDG-HVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNC 712
F LS+ D + L+EY EE P+++SN GMG L YY+K + DQ
Sbjct: 558 FSTADSLSLNDNSKLLLLEYSEEAPMMMSNFGMGNRLVNYYRKRNADDQE-----RPKRD 612
Query: 713 LGNVLTLEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAK---- 766
+G L DKSPF G + G + +L+ +YRAPVF H+ TDF + S
Sbjct: 613 IGETHVLLTQDKSPFANFGHVDQGETVPTLQNGLYRAPVFQHQTRPTDFFIAVSTTHQYG 672
Query: 767 GKISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAA---AKRGLLP 823
++ +R ++ + V QQ P+ EV + S+ + + R+ YR + + +R
Sbjct: 673 TRMWLRNMENLHTVGQQLPMAEVPTAHSRKVTEAAKKRLRTLAYRVYLKSQDPTRRDKT- 731
Query: 824 CIGVDELSV--QFPNLSEAIIRKKLKECAFLRRDGNGK-QVWSMKRTFHIPSEGDLRKLA 880
+D +++ R K++E +R+ N + VW +P LR
Sbjct: 732 ---LDNITIMKHLKGHDMPQTRSKMREFMTYQRNANREGGVWVPPAGTAVPDLETLRGEI 788
Query: 881 YPEHVCSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITP 940
PE VC +SMQAG+ RL LGI Q ++ DE + + IE+ L P
Sbjct: 789 KPEEVCLLDSMQAGVQRLNDLGINQ--------KGETEKDDEK-EIDENADIEKHL--AP 837
Query: 941 WNLSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVR 980
W + F+ T + L++ G GDP+GRG FS+V+
Sbjct: 838 WRATKTFLQAT----QGKAMLKLHGDGDPTGRGEAFSFVK 873
>gi|448084781|ref|XP_004195690.1| Piso0_005092 [Millerozyma farinosa CBS 7064]
gi|359377112|emb|CCE85495.1| Piso0_005092 [Millerozyma farinosa CBS 7064]
Length = 1124
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/283 (31%), Positives = 145/283 (51%), Gaps = 23/283 (8%)
Query: 619 VRPNSLIHLIRTKIHLLPRAQKLPGENKSLRPPGAFKKKSDLSVKDGHVFL-MEYCEERP 677
VRP +LI+ R K R +K +++ F K SDL++ D V + MEY EE P
Sbjct: 478 VRPGTLINFSRLKT----RKRK---KDRGKTSQELFAKSSDLTMTDSAVTIGMEYAEEYP 530
Query: 678 LLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLTLEPGDKSPF--LGDIKAGC 735
+LSN GMG+ L YY+K D + LG L D+SPF G ++ G
Sbjct: 531 PILSNFGMGSKLINYYRKEKDDDNSRP-----KAPLGETHILGVEDRSPFWNFGYVEKGD 585
Query: 736 SQSSLETNMYRAPVFTHKVATTDFLLVRSAKG----KISIRRIDKVAVVAQQEPLMEVMS 791
+L NM R+ VF H+ TDFLL+RS + ++ +D + V Q P +E+ +
Sbjct: 586 FVPTLYNNMVRSSVFKHEPRKTDFLLIRSQGAGNHQRYFLKALDHLFAVGQIFPSVEIPA 645
Query: 792 PGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLSEAIIRKKLKECAF 851
P S+ + S NR+ + ++R +A + + V ++S FP+ ++ R++LKE
Sbjct: 646 PHSRKVTNTSKNRLKMIIFRAMNANDES----RVSVKDISHHFPDQNDMQNRQRLKEFMD 701
Query: 852 LRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAG 894
+R G+ + W +K + +P+E +++ + PE V +SMQ G
Sbjct: 702 YQRHGDDQGYWKIKGSDSVPTENEIKAMISPEDVAMLDSMQHG 744
Score = 47.4 bits (111), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 6/65 (9%)
Query: 937 QITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSS--AMVKK 994
++ PWN + NF+ NQ + L++ G GDP+G GLG+S++R K+S S A VK+
Sbjct: 817 ELAPWNSTRNFINA-NQSKA---MLQLNGEGDPTGIGLGYSFLRVTQKSSFSPLYAPVKE 872
Query: 995 KAAAN 999
N
Sbjct: 873 NVPKN 877
>gi|344304931|gb|EGW35163.1| hypothetical protein SPAPADRAFT_146108 [Spathaspora passalidarum
NRRL Y-27907]
Length = 1114
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/250 (33%), Positives = 131/250 (52%), Gaps = 17/250 (6%)
Query: 653 AFKKKSDLSVKD-GHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNN 711
F K +DL+ D ++ MEYCE+ P +LSN GMG+ + YY K D + G
Sbjct: 490 VFSKTTDLTAADTANLIAMEYCEQYPQILSNFGMGSKIINYYAKERRDDSSRPKAQLGET 549
Query: 712 CLGNVLTLEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRS----A 765
+VL LE D+SPF G + G +L NM RAP+F H+ TDFLL++S +
Sbjct: 550 ---HVLGLE--DRSPFWNFGIVAPGDFVPTLYNNMVRAPIFKHEGKNTDFLLIKSQGAGS 604
Query: 766 KGKISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCI 825
K +R I+ V P++EV +P S+ + S NR+ + V+R + + I
Sbjct: 605 HQKFYLRAINFNFAVGNTFPVVEVPAPHSRKVTNTSKNRLKMIVFRVMNNKG----MARI 660
Query: 826 GVDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTF-HIPSEGDLRKLAYPEH 884
V ++S FP+ ++ R++LKE +R G+ + W +K + H+P+E D+R + PE
Sbjct: 661 SVKDVSKHFPDQNDMQNRQRLKEFMEYQRQGDDQGFWKIKGSHDHVPTEDDIRSMITPED 720
Query: 885 VCSYESMQAG 894
++MQ G
Sbjct: 721 SSMLDTMQYG 730
Score = 48.9 bits (115), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 35/53 (66%), Gaps = 4/53 (7%)
Query: 932 IERELQITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPK 984
I+ + ++ PWNLS NF+ NQ + L++ G GDPSG GLG+S++R+ K
Sbjct: 794 IDIDEELAPWNLSKNFI-IANQTKS---MLQLNGEGDPSGIGLGYSFLRSTQK 842
>gi|219110123|ref|XP_002176813.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411348|gb|EEC51276.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 1422
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 123/472 (26%), Positives = 201/472 (42%), Gaps = 113/472 (23%)
Query: 714 GNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLV----------- 762
G L P PFLG+++ + + + TN++ AP+F H+ TTDFL+V
Sbjct: 515 GVTENLHPKVHGPFLGEVEDSTTVTGIITNLFVAPMFLHEPETTDFLMVLTPPSGAARPG 574
Query: 763 -RSAKGKISIRRIDKVAVVAQQEPLMEVMSP---GSKNLQ----TYSINRMLVNVYREFS 814
R + I V Q EP + V +P G KN +Y I R L
Sbjct: 575 QRESMSVILRDLPTSTFTVGQTEPRVRVFAPNTQGEKNFVGPFVSYQIARALAR------ 628
Query: 815 AAAKRGLLPCIGVDELSVQ-FPNLS--EAIIRKKLKECAFLRRDGNGKQVWSMKRTF--H 869
+ + G + DE+ + PNL +R +LK+ A ++ Q+W+ K+
Sbjct: 629 SQGREG--HGLRFDEIQDRVLPNLELPSNALRPRLKQVALYDKN---TQIWTTKQIGFEE 683
Query: 870 IPSEGDLRKLAYPEHVCSYESMQAGLYRLKHLGITQLTLPA------------------- 910
P L + PE V ++ES A RL LGI QL +
Sbjct: 684 YPGVDALGRTIAPEGVAAFESACAASRRLSDLGIHQLLAGSHTVLSVGVIMVYISGQLNA 743
Query: 911 -------------------SISSAMSQLPDEAIALA------------AASHIERELQIT 939
SIS+ ++A A+ A I +LQ+
Sbjct: 744 AKDLSRKMKKLAELRRSNKSISAVQVAFYEQAAAIIESHFKILRQKHEIAQFIYEQLQLA 803
Query: 940 PWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAA---PKASVSSAMVKKKA 996
PW+L+ F+ ++ + +++TG+GDPSG+G GFS++R A P SV +A + +
Sbjct: 804 PWHLTGEFIDV-HKKGDGTGMMKLTGLGDPSGQGEGFSFIREADSKPSKSVGNAALSAEV 862
Query: 997 AANRGGSTVTGTDADLRRLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAAS 1056
+TGT+ DLR+L+M+ +L + + +E I RW R+ +IR LS++ A+
Sbjct: 863 ------KKITGTEDDLRKLTMKQMASLLRSYGMTQEKIDTLKRWDRVHVIRDLSTKAASD 916
Query: 1057 GV----------------QLQQQTRGKCQEIWDRQVQSLSAADDDEIGSDSE 1092
G+ + +Q R + + IW RQ+ +LS DD++ +E
Sbjct: 917 GIGDGLERFARGEKMKLSEQKQMYRDRVRVIWRRQIAALSM--DDKVAGSTE 966
Score = 45.4 bits (106), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
Query: 654 FKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSG 709
+ ++DLS +G + L+EYCEERP + GM + + YY+ GD+A + +G
Sbjct: 397 LRSEADLSPTEGKLILLEYCEERPPIQLTKGMASKIVNYYR----GDKAHCPVSAG 448
>gi|321254295|ref|XP_003193027.1| transcription initiation factor TFIID 111 kDa subunit [Cryptococcus
gattii WM276]
gi|317459496|gb|ADV21240.1| transcription initiation factor TFIID 111 kDa subunit, putative
[Cryptococcus gattii WM276]
Length = 1065
Score = 131 bits (329), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 116/392 (29%), Positives = 175/392 (44%), Gaps = 45/392 (11%)
Query: 650 PPGAFKKKSDLSVKD-GHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCS 708
P FK DL++ + G L+E+ EE P ++SN GMG + YY+K D+ L
Sbjct: 435 PSEKFKTTKDLTLTEQGPFVLLEFSEEYPPIMSNYGMGTTIVNYYRKVDDKDETVPKLDF 494
Query: 709 GNNCLGNVLTLEPGDKSPF-LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVR-SAK 766
G + N GD PF LG + G + N+ RAP+F HK TTDFL +R +
Sbjct: 495 GQPSILNT-----GDAEPFLLGYVDRGKVTQVIHNNLIRAPIFRHKPETTDFLCIRQTVN 549
Query: 767 GKIS--IRRIDKVAVVAQQEP-LMEVMSP-GSKNLQTYSINRMLVNVYREFSAAAKRGLL 822
G +S +R I + V Q P EV P KN T + M++ + KR
Sbjct: 550 GHVSYHLRPISNIFTVGQTVPNESEVHGPHARKNTNTAKMRLMIIAWLLINKSKQKR--- 606
Query: 823 PCIGVDELSVQFPNLSEAIIRKKLKE-----CAFLRRDGNGKQVWSMKRTFHIPSE-GDL 876
+ +L FP+ +E +R++LK + R G + W + + P E +
Sbjct: 607 --FKIGKLLKYFPDQTELQMRQRLKVKGNEFLMYARSPGPNQGYWMLNPDYAFPDERRQV 664
Query: 877 RKLAYPEHVCSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIEREL 936
++ PEH C YE+MQ G L G + +A DE A IE+ L
Sbjct: 665 LEMCPPEHACLYEAMQVGARHLYDAGYKK--------TAEGGHEDED---EAGLDIEQRL 713
Query: 937 QITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASV-----SSAM 991
+ W+ + N+ Q L + G GDP+GRG GFS++RA K +
Sbjct: 714 AV--WSTTHNYKLAEAQK----AWLMVHGDGDPTGRGEGFSFLRANMKNYFLRKGETEQG 767
Query: 992 VKKKAAANRGGSTVTGTDADLRRLSMEAAREV 1023
+ +A A GG+ V ++A+ R+ E R+V
Sbjct: 768 RRLEAEARAGGNPVKISNAEQNRIYEEEKRKV 799
>gi|405118990|gb|AFR93763.1| transcription initiation factor tfiid subunit [Cryptococcus
neoformans var. grubii H99]
Length = 1068
Score = 130 bits (328), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 115/392 (29%), Positives = 175/392 (44%), Gaps = 45/392 (11%)
Query: 650 PPGAFKKKSDLSVKD-GHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCS 708
P FK DL++ + G L+E+ EE P ++SN GMG + YY+K D+ L
Sbjct: 435 PSEKFKTTKDLTLTEQGPFVLLEFSEEYPPIMSNYGMGTTIVNYYRKIDDKDETVPKLDF 494
Query: 709 GNNCLGNVLTLEPGDKSPF-LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVR-SAK 766
G + N GD PF LG + G + N+ RAP+F HK TTDFL +R +
Sbjct: 495 GQPSILNT-----GDAEPFLLGYVDRGKVTQVIHNNLIRAPIFRHKPETTDFLCIRQTVN 549
Query: 767 GKIS--IRRIDKVAVVAQQEP-LMEVMSP-GSKNLQTYSINRMLVNVYREFSAAAKRGLL 822
G +S +R I + V Q P EV P KN T + M++ + KR
Sbjct: 550 GHVSYHLRPISNIFTVGQTVPNESEVHGPHARKNTNTAKMRLMIIAWLLINKSKQKR--- 606
Query: 823 PCIGVDELSVQFPNLSEAIIRKKLKE-----CAFLRRDGNGKQVWSMKRTFHIPSE-GDL 876
+ +L FP+ +E +R++LK + R G + W + + P + +
Sbjct: 607 --FKIGKLLKYFPDQTELQMRQRLKVKGNEFLMYARSPGPNQGYWMLNPDYAFPDDRRQV 664
Query: 877 RKLAYPEHVCSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIEREL 936
++ PEH C YE+MQ G L G + +A DE A IE+ L
Sbjct: 665 LEMCPPEHACLYEAMQVGARHLYDAGYKK--------TAEGGHEDED---EAGLDIEQRL 713
Query: 937 QITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASV-----SSAM 991
+ W+ + N+ Q L + G GDP+GRG GFS++RA K +
Sbjct: 714 AV--WSTTHNYKLAEAQK----AWLMVHGEGDPTGRGEGFSFLRANMKNYFLRKGETEQG 767
Query: 992 VKKKAAANRGGSTVTGTDADLRRLSMEAAREV 1023
+ +A A GG+ V ++A+ R+ E R+V
Sbjct: 768 RRLEAEARAGGNPVKISNAEQNRIYEEEKRKV 799
>gi|134109149|ref|XP_776689.1| hypothetical protein CNBC1800 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50259369|gb|EAL22042.1| hypothetical protein CNBC1800 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1069
Score = 130 bits (327), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 115/392 (29%), Positives = 175/392 (44%), Gaps = 45/392 (11%)
Query: 650 PPGAFKKKSDLSVKD-GHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCS 708
P FK DL++ + G L+E+ EE P ++SN GMG + YY+K D+ L
Sbjct: 437 PSEKFKTTKDLTLTEQGPFVLLEFSEEYPPIMSNYGMGTTIVNYYRKIDDKDETVPKLDF 496
Query: 709 GNNCLGNVLTLEPGDKSPF-LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVR-SAK 766
G + N GD PF LG + G + N+ RAP+F HK TTDFL +R +
Sbjct: 497 GQPSILNT-----GDAEPFLLGYVDRGKVTQVIHNNLIRAPIFRHKPETTDFLCIRQTVN 551
Query: 767 GKIS--IRRIDKVAVVAQQEP-LMEVMSP-GSKNLQTYSINRMLVNVYREFSAAAKRGLL 822
G +S +R I + V Q P EV P KN T + M++ + KR
Sbjct: 552 GHVSYHLRPISNIFTVGQTVPNESEVHGPHARKNTNTAKMRLMIIAWLLINKSKQKR--- 608
Query: 823 PCIGVDELSVQFPNLSEAIIRKKLKE-----CAFLRRDGNGKQVWSMKRTFHIPSE-GDL 876
+ +L FP+ +E +R++LK + R G + W + + P + +
Sbjct: 609 --FKIGKLLKYFPDQTELQMRQRLKVKGNEFLMYARSPGPNQGYWMLNPDYAFPDDRRQV 666
Query: 877 RKLAYPEHVCSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIEREL 936
++ PEH C YE+MQ G L G + +A DE A IE+ L
Sbjct: 667 LEMCPPEHACLYEAMQVGARHLYDAGYKK--------TAEGGHEDED---EAGLDIEQRL 715
Query: 937 QITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASV-----SSAM 991
+ W+ + N+ Q L + G GDP+GRG GFS++RA K +
Sbjct: 716 AV--WSTTHNYKLAEAQK----AWLMVHGEGDPTGRGEGFSFLRANMKNYFLRKGETEQG 769
Query: 992 VKKKAAANRGGSTVTGTDADLRRLSMEAAREV 1023
+ +A A GG+ V ++A+ R+ E R+V
Sbjct: 770 RRLEAEARAGGNPVKISNAEQNRIYEEEKRKV 801
>gi|58265158|ref|XP_569735.1| transcription initiation factor tfiid 111 kda subunit [Cryptococcus
neoformans var. neoformans JEC21]
gi|57225967|gb|AAW42428.1| transcription initiation factor tfiid 111 kda subunit, putative
[Cryptococcus neoformans var. neoformans JEC21]
Length = 1069
Score = 130 bits (326), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 115/392 (29%), Positives = 175/392 (44%), Gaps = 45/392 (11%)
Query: 650 PPGAFKKKSDLSVKD-GHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCS 708
P FK DL++ + G L+E+ EE P ++SN GMG + YY+K D+ L
Sbjct: 437 PSEKFKTTKDLTLTEQGPFVLLEFSEEYPPIMSNYGMGTTIVNYYRKIDDKDETVPKLDF 496
Query: 709 GNNCLGNVLTLEPGDKSPF-LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVR-SAK 766
G + N GD PF LG + G + N+ RAP+F HK TTDFL +R +
Sbjct: 497 GQPSILNT-----GDAEPFLLGYVDRGKVTQVIHNNLIRAPIFRHKPETTDFLCIRQTVN 551
Query: 767 GKIS--IRRIDKVAVVAQQEP-LMEVMSP-GSKNLQTYSINRMLVNVYREFSAAAKRGLL 822
G +S +R I + V Q P EV P KN T + M++ + KR
Sbjct: 552 GHVSYHLRPISNIFTVGQTVPNESEVHGPHARKNTNTAKMRLMIIAWLLINKSKQKR--- 608
Query: 823 PCIGVDELSVQFPNLSEAIIRKKLKE-----CAFLRRDGNGKQVWSMKRTFHIPSE-GDL 876
+ +L FP+ +E +R++LK + R G + W + + P + +
Sbjct: 609 --FKIGKLLKYFPDQTELQMRQRLKVKGNEFLMYARSPGPNQGYWMLNPDYAFPDDRRQV 666
Query: 877 RKLAYPEHVCSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIEREL 936
++ PEH C YE+MQ G L G + +A DE A IE+ L
Sbjct: 667 LEMCPPEHACLYEAMQVGARHLYDAGYKK--------TAEGGHEDED---EAGLDIEQRL 715
Query: 937 QITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASV-----SSAM 991
+ W+ + N+ Q L + G GDP+GRG GFS++RA K +
Sbjct: 716 AV--WSTTHNYKLAEAQK----AWLMVHGEGDPTGRGEGFSFLRANMKNYFLRKGETEQG 769
Query: 992 VKKKAAANRGGSTVTGTDADLRRLSMEAAREV 1023
+ +A A GG+ V ++A+ R+ E R+V
Sbjct: 770 RRLEAEARAGGNPVKISNAEQNRIYEEEKRKV 801
>gi|260945094|ref|XP_002616845.1| hypothetical protein CLUG_04086 [Clavispora lusitaniae ATCC 42720]
gi|238850494|gb|EEQ39958.1| hypothetical protein CLUG_04086 [Clavispora lusitaniae ATCC 42720]
Length = 1158
Score = 129 bits (323), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/248 (32%), Positives = 125/248 (50%), Gaps = 16/248 (6%)
Query: 654 FKKKSDLSVKDGH-VFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNC 712
F +DL+ D + MEY EE P +LSN GMG+ L YY+K D +
Sbjct: 511 FSSSADLTTTDTSPIIAMEYSEEAPKILSNFGMGSKLINYYRKEKEDDNSRP-----KAP 565
Query: 713 LGNVLTLEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSA----K 766
LG L D+SPF G + G +L NM RAPVF + +TDFLL+RS
Sbjct: 566 LGETHVLGVEDRSPFWNFGHVAKGDFVPTLYNNMIRAPVFKQEAKSTDFLLIRSQGCGNH 625
Query: 767 GKISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIG 826
+ ++R+D + V P +EV +P S+ + S NR+ + V+R + L
Sbjct: 626 QRYYLKRMDHLFAVGNIFPAVEVPAPHSRKVTNTSKNRLKMIVFRTMNKNGTARL----S 681
Query: 827 VDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVC 886
V ++S FP+ ++ R++LKE +R G+ + W ++ + +P+E ++R + PE V
Sbjct: 682 VKDISSHFPDQNDMQNRQRLKEFMEYQRQGDDQGFWKIRNSSTVPTEEEIRSMITPEDVA 741
Query: 887 SYESMQAG 894
+SMQ G
Sbjct: 742 LLDSMQHG 749
Score = 42.7 bits (99), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 29/46 (63%), Gaps = 4/46 (8%)
Query: 939 TPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPK 984
TPW+ S +F+ NQ + L++ G GDPSG GLGFS +RA K
Sbjct: 820 TPWSSSRSFI-IANQTKA---MLQLNGEGDPSGIGLGFSLLRATQK 861
>gi|406697096|gb|EKD00364.1| hypothetical protein A1Q2_05333 [Trichosporon asahii var. asahii CBS
8904]
Length = 1029
Score = 127 bits (320), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 111/398 (27%), Positives = 182/398 (45%), Gaps = 50/398 (12%)
Query: 650 PPGAFKKKSDLSVKDGHVF-LMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCS 708
P FK DLSV + F L+E+ EE P ++S GMG + YY+K D+ L
Sbjct: 406 PAERFKTTKDLSVTEKCPFALLEFSEECPPIMSGYGMGTTIVNYYRKKDDKDEHVPKLEL 465
Query: 709 GNNCLGNVLTLEPGDKSPF-LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVR---S 764
G + NV GD PF LG + G + N+ RAP+F H+ TDFL++R +
Sbjct: 466 GQPSILNV-----GDAEPFLLGYVDPGKVTQVIHNNLIRAPIFKHQPENTDFLVIRQTIN 520
Query: 765 AKGKISIRRIDKVAVVAQQEPLM-EVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLP 823
IR I+ + V Q P M EV P ++ T + +R+++ + K+ P
Sbjct: 521 GHATYYIREINHLFTVGQTVPNMSEVPGPHARKNTTTAKHRLMIVAW----ILIKKNKDP 576
Query: 824 ---CIGVDELSVQFPNLSEAIIRKKLKECA--FLRRDGNGK---QVWSMKRTFHIPSE-G 874
+ + L FP+ +E +R++LK FL D + K W + + P E
Sbjct: 577 EKQRVKLARLLKYFPDQTELQMRQRLKIKGNEFLEYDHDSKFHSGYWKLNPKYDFPKEKK 636
Query: 875 DLRKLAYPEHVCSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIER 934
D+ ++ PE+ YE+MQ G L+ G T+ + +A + D+ ++
Sbjct: 637 DVLRMVTPEYASLYEAMQVGAQHLRDAGYTK----TADGNAEDEFGDK-----GEEGLDV 687
Query: 935 ELQITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKK 994
E ++ W + N+ Q L++ G GDP+GRG GFS++ K ++ + ++K
Sbjct: 688 EQRLAVWATTLNYKRAEAQK----AWLQVHGDGDPTGRGEGFSFL----KTNMKNYFLRK 739
Query: 995 ---------KAAANRGGSTVTGTDADLRRLSMEAAREV 1023
+A A GG V ++A+ R+ E R+V
Sbjct: 740 GETEEGRRLEAEAKAGGGPVKISNAEQSRIYEEEKRKV 777
>gi|401880988|gb|EJT45295.1| hypothetical protein A1Q1_06239 [Trichosporon asahii var. asahii CBS
2479]
Length = 1029
Score = 127 bits (320), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 111/398 (27%), Positives = 182/398 (45%), Gaps = 50/398 (12%)
Query: 650 PPGAFKKKSDLSVKDGHVF-LMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCS 708
P FK DLSV + F L+E+ EE P ++S GMG + YY+K D+ L
Sbjct: 406 PAERFKTTKDLSVTEKCPFALLEFSEECPPIMSGYGMGTTIVNYYRKKDDKDEHVPKLEL 465
Query: 709 GNNCLGNVLTLEPGDKSPF-LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVR---S 764
G + NV GD PF LG + G + N+ RAP+F H+ TDFL++R +
Sbjct: 466 GQPSILNV-----GDAEPFLLGYVDPGKVTQVIHNNLIRAPIFKHQPENTDFLVIRQTIN 520
Query: 765 AKGKISIRRIDKVAVVAQQEPLM-EVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLP 823
IR I+ + V Q P M EV P ++ T + +R+++ + K+ P
Sbjct: 521 GHATYYIREINHLFTVGQTVPNMSEVPGPHARKNTTTAKHRLMIVAW----ILIKKNKDP 576
Query: 824 ---CIGVDELSVQFPNLSEAIIRKKLKECA--FLRRDGNGK---QVWSMKRTFHIPSE-G 874
+ + L FP+ +E +R++LK FL D + K W + + P E
Sbjct: 577 EKQRVKLARLLKYFPDQTELQMRQRLKIKGNEFLEYDHDSKFHSGYWKLNPKYDFPKEKK 636
Query: 875 DLRKLAYPEHVCSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIER 934
D+ ++ PE+ YE+MQ G L+ G T+ + +A + D+ ++
Sbjct: 637 DVLRMVTPEYASLYEAMQVGAQHLRDAGYTK----TADGNAEDEFGDK-----GEEGLDV 687
Query: 935 ELQITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKK 994
E ++ W + N+ Q L++ G GDP+GRG GFS++ K ++ + ++K
Sbjct: 688 EQRLAVWATTLNYKRAEAQK----AWLQVHGDGDPTGRGEGFSFL----KTNMKNYFLRK 739
Query: 995 ---------KAAANRGGSTVTGTDADLRRLSMEAAREV 1023
+A A GG V ++A+ R+ E R+V
Sbjct: 740 GETEEGRRLEAEAKAGGGPVKISNAEQSRIYEEEKRKV 777
>gi|403180347|ref|XP_003338654.2| hypothetical protein PGTG_20151, partial [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
gi|375166318|gb|EFP94235.2| hypothetical protein PGTG_20151, partial [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
Length = 758
Score = 126 bits (317), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 81/255 (31%), Positives = 134/255 (52%), Gaps = 15/255 (5%)
Query: 654 FKKKSDLSVKD-GHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNC 712
K +DL++KD G L EY EE P ++SN GMG+ L YY+K + D N+
Sbjct: 499 LKNTTDLTLKDTGPFMLFEYSEEAPPVISNVGMGSILVNYYRKQNELDDHIP-----NDD 553
Query: 713 LGNVLTLEPGDKSPFL--GDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSA---KG 767
+G L+ D+SPF+ G I+ G + +L N+ RAP+F H ++ +FL++R+ +
Sbjct: 554 IGEPFVLDVADESPFMKFGSIRPGETVPTLYNNLVRAPLFKHTPSSNEFLVIRNTTETET 613
Query: 768 KISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGV 827
IR ID + VV Q P++EV P S+ T +R+ ++ + ++ G I +
Sbjct: 614 NYYIRPIDHLYVVGQTYPVVEVPGPHSRKTTTQLKHRLQTIAFK-LCSKSEDG---RIRI 669
Query: 828 DELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCS 887
++ F + +E +R++LKE R G + W+++ +P + ++ KL PE VC
Sbjct: 670 GKVMKYFNDQNEMQMRQRLKEFMEYTRKGLNQGFWTIRPGLKVPDKEEIFKLVTPEGVCL 729
Query: 888 YESMQAGLYRLKHLG 902
ESMQ G +L G
Sbjct: 730 AESMQVGQRQLLDAG 744
>gi|241949203|ref|XP_002417324.1| TAFII-145, putative; TBP-associated factor 1, putative;
transcription initiation factor TFIID subunit 1,
putative [Candida dubliniensis CD36]
gi|223640662|emb|CAX44957.1| TAFII-145, putative [Candida dubliniensis CD36]
Length = 1237
Score = 125 bits (313), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/249 (33%), Positives = 130/249 (52%), Gaps = 18/249 (7%)
Query: 654 FKKKSDLSVKD-GHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNC 712
F K DL+V D G++ +EY E+ P +LSN GMG+ L YY+K P D + G
Sbjct: 570 FSKTGDLTVADTGNIIALEYSEQYPPILSNFGMGSKLINYYRKERPNDTSRPKAQIGET- 628
Query: 713 LGNVLTLEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRS----AK 766
++L +E D+SPF G++ G +L NM RAP+F H TDFLLV+S +
Sbjct: 629 --HILGVE--DRSPFWNFGEVAPGDFVPTLYNNMVRAPIFKHDNKPTDFLLVKSQGAGSH 684
Query: 767 GKISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIG 826
K +R I+ V P+ EV +P S+ + S NR+ + V+R ++ +P I
Sbjct: 685 QKFYLRGINFNFAVGNTFPV-EVPAPHSRKVTNISKNRLKMVVFRVMNSIG----MPRIS 739
Query: 827 VDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFH-IPSEGDLRKLAYPEHV 885
V ++S FP ++ R++LKE +R G+ + W ++ IP E ++R + PE
Sbjct: 740 VKDVSKHFPEHTDMQNRQRLKEFMEYQRQGDDQGYWKVRGLNDVIPGEEEIRAMITPEDS 799
Query: 886 CSYESMQAG 894
++MQ G
Sbjct: 800 SLMDTMQYG 808
Score = 50.4 bits (119), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 35/55 (63%), Gaps = 4/55 (7%)
Query: 930 SHIERELQITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPK 984
+ I+ E ++ PWNLS NFV NQ + L++ G GDP+G GLGFS +RA K
Sbjct: 892 TEIDVEEELAPWNLSRNFV-IANQTKT---MLQLNGEGDPTGIGLGFSMLRATQK 942
>gi|207344885|gb|EDZ71876.1| YGR274Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 773
Score = 124 bits (311), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 126/250 (50%), Gaps = 16/250 (6%)
Query: 653 AFKKKSDLSVKD-GHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNN 711
+F DL++ D V+LMEY E+ P+ LS GM L YY+K++ D L G
Sbjct: 529 SFSTSQDLTIGDTAPVYLMEYSEQTPVALSKFGMANKLINYYRKANEQDTLRPKLPVGET 588
Query: 712 CLGNVLTLEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKI 769
+VL ++ DKSPF G ++ G +L NM RAPVF H ++ TDFLL +S+ I
Sbjct: 589 ---HVLGVQ--DKSPFWNFGFVEPGHIVPTLYNNMIRAPVFKHDISGTDFLLTKSSGFGI 643
Query: 770 S----IRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCI 825
S +R I+ + V Q P+ E+ P S+ + + R+ + +YR + + I
Sbjct: 644 SNRFYLRNINHLFTVGQTFPVEEIPGPNSRKVTSMKATRLKMIIYRILNHNHSK----AI 699
Query: 826 GVDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHV 885
+D ++ FP+ R+K+KE +RDG K +W +K + ++ L PE +
Sbjct: 700 SIDPIAKHFPDQDYGQNRQKVKEFMKYQRDGPEKGLWRLKDDEKLLDNEAVKSLITPEQI 759
Query: 886 CSYESMQAGL 895
ESM GL
Sbjct: 760 SQVESMSQGL 769
>gi|269859776|ref|XP_002649612.1| transcription initiation factor TFIID subunit [Enterocytozoon
bieneusi H348]
gi|220066975|gb|EED44444.1| transcription initiation factor TFIID subunit [Enterocytozoon
bieneusi H348]
Length = 801
Score = 122 bits (306), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 117/438 (26%), Positives = 195/438 (44%), Gaps = 71/438 (16%)
Query: 651 PGA--FKKKSDLSVKDGHVFLM-EYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLC 707
PG+ KK +++ D F++ EY EE P ++N GM + YY+K D
Sbjct: 242 PGSNIIKKPYEITCNDLSEFIVFEYSEEYPFFITNPGMASVCNKYYRKVDNNDDIDP--- 298
Query: 708 SGNNCLGNVLTLEPGDKSPFLG--DIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSA 765
+ + LEP D PFLG +I G + L+ N++ AP+F H TT +L+
Sbjct: 299 ------KDYIILEPEDDGPFLGYGEIPKGETGECLDNNLFVAPIFKH---TTKDVLIILT 349
Query: 766 KGKISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCI 825
+ K+ R I V VV Q+ P E+ P S+ L Y +++ + YR F+ + + +
Sbjct: 350 ENKLIYRPIHNVYVVGQEYPKDEIFIPHSRRLNQYCKDQVKLLAYRSFNKSNE------L 403
Query: 826 GVDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHV 885
+ L P+ SE+ RK LK+ + + G V+++K SE +LRK+ PE+V
Sbjct: 404 SLSVLDNLLPHFSESAKRKWLKDFTEVYKKGKD-TVFTLKSNSVALSEEELRKMVTPENV 462
Query: 886 CSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITP-WNLS 944
C Y+SM +G ++ LG L + DE E P W L
Sbjct: 463 CQYQSMLSGEQMMEDLGYKVL-----------EGEDE------------ETDFLPNWILC 499
Query: 945 SNFVACTNQDRENIERLEITGVGDPSGRGLGFSY---------------VRAAPKASVSS 989
NFV TN LEI G+ DP+G G G S+ + A +A+ +
Sbjct: 500 KNFVNATNGKG----FLEIKGLHDPTGIGEGISFGKMKFKKVSESENRKLMAEHQANYKT 555
Query: 990 AMVKKKAAANRGGSTVTGTDADLRRLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKL 1049
++K NR ++++ ++ DL + + K N + ++ T + ++ I++
Sbjct: 556 EIMK---VWNRQWASLS-SNEDLSKPKNSGESNLRKKNNKIDTSQSETTNYSKVLQIKRT 611
Query: 1050 SSEQAASGVQLQQQTRGK 1067
E + V +Q+ T K
Sbjct: 612 YIENGNTTVSIQKITDPK 629
>gi|355723064|gb|AES07771.1| TAF1 RNA polymerase II, TATA box binding protein -associated factor,
250kDa [Mustela putorius furo]
Length = 522
Score = 117 bits (294), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/239 (34%), Positives = 121/239 (50%), Gaps = 35/239 (14%)
Query: 887 SYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSN 946
+Y SM A RLK G + + A P+E I+ E++ PWN +
Sbjct: 1 AYYSMIAAEQRLKDAGYGEKSFFA---------PEEENEEDFQMKIDDEVRTAPWNTTRA 51
Query: 947 FVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVT 1006
F+A + LE+TGV DP+G G GFSYV+ K + K TVT
Sbjct: 52 FIAAM----KGKCLLEVTGVADPTGCGEGFSYVKIPNKPTQQ----KDDKEPQPVKKTVT 103
Query: 1007 GTDADLRRLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG--------- 1057
GTDADLRRLS++ A+++L KF VPEE I K +RW I ++R +S+EQA SG
Sbjct: 104 GTDADLRRLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSKFAR 163
Query: 1058 ------VQLQQQTRGKCQEIWDRQVQSLSAAD---DDEIGSDSEHSDLDSFAGDLENLL 1107
+ Q++ + +CQ I+D Q + LS+ + D S +E SD + ++EN+L
Sbjct: 164 GSRFSVAEHQERYKEECQRIFDLQNKVLSSTEVLSTDTDSSSAEDSDFEEMGKNIENML 222
>gi|355723061|gb|AES07770.1| TAF1 RNA polymerase II, TATA box binding protein -associated
factor, 250kDa [Mustela putorius furo]
Length = 412
Score = 114 bits (285), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/203 (35%), Positives = 105/203 (51%), Gaps = 14/203 (6%)
Query: 655 KKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLG 714
+ DL+ KDG + L EY EE L+ GM + YY K PG GA C G
Sbjct: 221 RTPQDLTGKDGDLILAEYSEENGPLMMQVGMATKIKNYY-KRKPGKDPGAPDCK----YG 275
Query: 715 NVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVAT---TDFLLVRSAKGKISI 771
+ SPFLG + G + E N++RAP++ HK+ TDFL++R+ +G I
Sbjct: 276 ETVYCH---TSPFLGSLHPGQLLQAFENNLFRAPIYLHKMPKMPETDFLIIRTRQG-YYI 331
Query: 772 RRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELS 831
R + + VV QQ PL EV P SK T+ + + V +YR F + R I ++++
Sbjct: 332 RELVDIFVVGQQCPLFEVPGPNSKRANTHIRDFLQVFIYRLFWKSKDRPRR--IRMEDIK 389
Query: 832 VQFPNLSEAIIRKKLKECAFLRR 854
FP+ SE+ IRK+LK CA +R
Sbjct: 390 KAFPSHSESSIRKRLKLCADFKR 412
>gi|255729488|ref|XP_002549669.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240132738|gb|EER32295.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 1035
Score = 110 bits (276), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 117/232 (50%), Gaps = 17/232 (7%)
Query: 670 MEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLTLEPGDKSPF-- 727
+EY E+ P +LSN GMG+ L YY+K D + G ++L +E D+SPF
Sbjct: 539 LEYSEQYPPILSNFGMGSKLINYYRKERANDTSRPKAQVGET---HILGVE--DRSPFWN 593
Query: 728 LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRS----AKGKISIRRIDKVAVVAQQ 783
G++ G +L NM RAP+F H TDFL++RS + K +R ++ V
Sbjct: 594 FGEVAPGDFVPTLYNNMVRAPIFKHDPKNTDFLMIRSQGAGSHQKFYLRAVNFNFAVGNT 653
Query: 784 EPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLSEAIIR 843
P+ EV +P S+ + S NR+ + V+R + P I V ++S FP ++ R
Sbjct: 654 FPV-EVPAPHSRKVTNISKNRLKMVVFRVMNNLGA----PRISVKDVSKHFPEHTDMQNR 708
Query: 844 KKLKECAFLRRDGNGKQVWSMKRTFH-IPSEGDLRKLAYPEHVCSYESMQAG 894
++LKE +R G+ + W ++ IP E ++R + PE ++MQ G
Sbjct: 709 QRLKEFMEYQRHGDDQGYWKVRGLNDVIPGEDEIRTMITPEDASLMDTMQFG 760
Score = 48.9 bits (115), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 35/55 (63%), Gaps = 4/55 (7%)
Query: 930 SHIERELQITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPK 984
+ ++ E ++ PWNLS NFV NQ + L++ G GDP+G GLGFS +RA K
Sbjct: 828 AELDVEDELAPWNLSRNFV-IANQTKT---MLQLNGEGDPTGIGLGFSMLRATQK 878
>gi|392579545|gb|EIW72672.1| hypothetical protein TREMEDRAFT_24569 [Tremella mesenterica DSM 1558]
Length = 1048
Score = 110 bits (274), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 110/395 (27%), Positives = 172/395 (43%), Gaps = 48/395 (12%)
Query: 650 PPGAFKKKSDLSVKD-GHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCS 708
P FK DL++ + G L+E+ EE P ++S GMG + YY+K D+ L
Sbjct: 423 PSERFKSTKDLTMTEKGPFVLLEFSEEYPPIMSGYGMGTTIVNYYRKQDDKDEHVPKLEL 482
Query: 709 GNNCLGNVLTLEPGDKSPF-LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRS--- 764
G + NV GD PF LG + G + N+ RAP+F H+ TTDFL++R
Sbjct: 483 GQPSILNV-----GDAEPFLLGYVDRGRVTQVIHNNLIRAPIFRHQPETTDFLMIRQTID 537
Query: 765 AKGKISIRRIDKVAVVAQQEP-LMEVMSP-GSKNLQTYSINRMLVNVYREFSAAAKRGLL 822
+R I + V Q P EV P KN T + ++ +K G L
Sbjct: 538 GHSTYHLRSIPHLYTVGQTVPNESEVPGPHARKNTNTAKLRLQIIAWL--LLDKSKTGRL 595
Query: 823 PCIGVDELSVQFPNLSEAIIRKKL--KECAFL---RRDGNGKQVWSMKRTFHIPSEGDLR 877
+ +L+ FP+ +E +R++L K FL R + W + T+ P + +
Sbjct: 596 ---KLSKLNKYFPDQTELKMRQRLNIKGNEFLDYARGTAPNQGHWKLSDTYDFPKDRKVV 652
Query: 878 K-LAYPEHVCSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIEREL 936
+ L PE YE+M G L G + + +A + DEA ++ E
Sbjct: 653 QLLCTPEAAMLYEAMLVGQRHLYDAGYAK----TAEGNASEEFDDEA-------GLDIEQ 701
Query: 937 QITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSA------ 990
Q+ W+ + N+ Q L + G GDP+GRG GFS++R K+ A
Sbjct: 702 QLAVWSTTLNYKKAEAQK----AWLIVHGEGDPTGRGEGFSFIRTNMKSYFLRAGETEQG 757
Query: 991 --MVKKKAAANRGGSTVTGTDADLRRLSMEAAREV 1023
+ ++AA GS + ++A+ R+ E R V
Sbjct: 758 RRLEAQRAAP--AGSVIKISNAEQGRIYEEEKRRV 790
>gi|63101645|gb|AAH94568.1| TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated
factor [Mus musculus]
Length = 929
Score = 108 bits (269), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/165 (39%), Positives = 93/165 (56%), Gaps = 22/165 (13%)
Query: 961 LEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLRRLSMEAA 1020
LE+TGV DP+G G GFSYV+ K + K TVTGTDADLRRLS++ A
Sbjct: 7 LEVTGVADPTGCGEGFSYVKIPNKPT----QQKDDKEPQPVKKTVTGTDADLRRLSLKNA 62
Query: 1021 REVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG---------------VQLQQQTR 1065
+++L KF VPEE I K +RW I ++R +S+EQA SG + Q++ +
Sbjct: 63 KQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSKFARGSRFSVAEHQERYK 122
Query: 1066 GKCQEIWDRQVQSLSAAD---DDEIGSDSEHSDLDSFAGDLENLL 1107
+CQ I+D Q + LS+ + D S +E SD + ++EN+L
Sbjct: 123 EECQRIFDLQNKVLSSTEVLSTDTDSSSAEDSDFEEMGKNIENML 167
>gi|307103188|gb|EFN51450.1| hypothetical protein CHLNCDRAFT_140182 [Chlorella variabilis]
Length = 585
Score = 106 bits (265), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 112/229 (48%), Gaps = 28/229 (12%)
Query: 860 QVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRLKHLGITQLTLPASISSAMSQL 919
+++S+K PSE +LRK PE C+ E+ +R+K G+ M +
Sbjct: 17 EIFSLKDAARPPSEAELRKKLTPEEACTLEACYVAAFRMKQRGLV-----------MHEK 65
Query: 920 PDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYV 979
D+A + PW L+ FV RE +L++ G DP+GRG G+S+V
Sbjct: 66 LDKAAS-------------APWTLTDAFV---THFREGKAQLQLAGAADPTGRGFGYSFV 109
Query: 980 RAAPKASVSSAMVKKKAAANRGGSTVTGTDADLRRLSMEAAREVLLKFNVPEEMIAKQTR 1039
R ++ V K+ A + G V GTDADLRR++ A+E L + + EE I R
Sbjct: 110 RDVRHKHANADDVTKQMAKRQAGK-VQGTDADLRRMTTAQAKERLRGYGMTEEEIQGLGR 168
Query: 1040 WHRIAMIRKLSSEQAASGVQLQQQTRGKCQEIWDRQVQSLSAADDDEIG 1088
W I M K Q + ++LQ++ K Q+I ++Q+ L+ + +++G
Sbjct: 169 WTMIDMAIKFVRHQKTTMIELQRRAAEKAQQILEKQMAVLNNSAGEDLG 217
>gi|118367731|ref|XP_001017075.1| hypothetical protein TTHERM_00193220 [Tetrahymena thermophila]
gi|89298842|gb|EAR96830.1| hypothetical protein TTHERM_00193220 [Tetrahymena thermophila SB210]
Length = 1949
Score = 105 bits (263), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 91/364 (25%), Positives = 166/364 (45%), Gaps = 58/364 (15%)
Query: 713 LGNVLTLEPGDKSPFLGDI------KAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSA- 765
LG V+ + DK+ G + K + LE ++++AP+F ++ TDFLLVR
Sbjct: 1477 LGRVVFYDDNDKTNLFGQLDDQEEGKESLGITVLENHLFKAPIFKQRLPETDFLLVRQQE 1536
Query: 766 --KGKISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLP 823
K +R I+ V VV Q EP + P S+++ Y N M + + K
Sbjct: 1537 NDKCNYYLRPIEYVYVVGQIEPSKSIYRPRSRDITPYMKNCMNTFIMIKIQKEKK----- 1591
Query: 824 CIGVDELSVQF-PNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDL---RKL 879
+ +L F NL+E IR+++K+ N K + K TF +P + D +
Sbjct: 1592 -VHFQDLLNNFSKNLTETQIRQQIKK-------KNLKPELNNKNTF-VPKDNDQDSDNEN 1642
Query: 880 AY-----PEHVCSYESMQAGLYRLKH-LGITQLTLPASISSAMSQL----PDEAIALAAA 929
A+ PE C +E M + +Y L + +G+ +L + + +++ P++ A
Sbjct: 1643 AHDPELTPEQACMFEKMLSHVYHLSNEIGLKELRTTEKLKNVLAKFQRDYPEDIKNYTIA 1702
Query: 930 SHIERELQITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSS 989
I +L +TPW+LS+NF + ++L + G+GDP+ G+S+++
Sbjct: 1703 KLITDKLSLTPWSLSNNFA-------HDKQKLYLEGLGDPTNGHGGYSFIKRP------- 1748
Query: 990 AMVKKKAAAN--RGGSTVTGTDADLRRLSMEAAREVLLKFNVPEEMI---AKQTRWHRIA 1044
+KK++ + + DLR+L++ +L K + + K+ RW +I
Sbjct: 1749 --LKKRSEKDDKQNNKEDEKQKEDLRKLNISEINNILSKLGINLDTKIGETKKQRWAKIE 1806
Query: 1045 MIRK 1048
+I+K
Sbjct: 1807 LIKK 1810
Score = 43.9 bits (102), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 25/39 (64%)
Query: 654 FKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTY 692
FK K +LS+K V +MEY EE PL+L N GM + + Y
Sbjct: 1356 FKSKRNLSLKKDVVIMMEYIEEDPLVLQNIGMNSKIFRY 1394
>gi|156085892|ref|XP_001610355.1| bromodomain containing protein [Babesia bovis T2Bo]
gi|154797608|gb|EDO06787.1| bromodomain containing protein [Babesia bovis]
Length = 1857
Score = 104 bits (259), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 124/508 (24%), Positives = 197/508 (38%), Gaps = 152/508 (29%)
Query: 650 PPGAFKKKSDLSVKDG-HVFLMEYCEERPLLLSNAGMGA---NLCTYYQKSSPGDQA--G 703
P F DLS+ D V LMEY E+ PLLL+N GM + N + + + D A G
Sbjct: 954 PSNYFIHSRDLSLNDDCKVALMEYVEQHPLLLANCGMASRVDNYVNHKEDETRKDVAFLG 1013
Query: 704 AL--LCSGNN---CLGNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTH------ 752
L LC N+ G + PGD Q+ LE+ +++AP+F H
Sbjct: 1014 PLGTLCQANDGIELFGVKYNVPPGD------------GQTILESTLFKAPIFVHPRPGST 1061
Query: 753 -----KVATTDFLLVRSAKGKISIRRI------DKVAV--VAQQEPLMEVMSPGSKN--- 796
+ TTDFLL RS G ++ R+ + VAV V Q EP +++ +PGSK
Sbjct: 1062 WEQSLSINTTDFLLTRSRGGGETVIRLRPLTWQNGVAVYTVGQCEPKVDIPAPGSKTFVE 1121
Query: 797 -----LQTYSINRMLVNV---YREFSAAAKRGLLPCIGVDELSVQFPNLSEAIIRKKLKE 848
L+ + + ++V + A++ P + ++S + I
Sbjct: 1122 HTNELLKAWVLKSVMVGSILDVKHLRKEARKKFCPVLSEKDISHMLKQIESTPI------ 1175
Query: 849 CAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRLKHLGITQLTL 908
F R +++R H G ++ PE +C+ ES +AG RL +GI L
Sbjct: 1176 --FSLR------AQALERLIH----GAIK----PELICALESARAGKARLATMGILHLKN 1219
Query: 909 PASISSAMSQLPDE---------------------------------------------A 923
P ++ ++ E
Sbjct: 1220 PDNVGGIYDKMEKEERQYQQSQQAMDKRLRELKSSYAKRLEAHGVTGEKLDAEMQQFDFG 1279
Query: 924 IALAAASHIERE------------LQITPWNLSSNFVACTNQDRENIERLEITGVGDPSG 971
+ ++ H+E L +TPWN+S + + + + G GDPSG
Sbjct: 1280 LHVSMYGHLEERTIAPKVKFIKELLDLTPWNISRDVRQVLSN--RGTSQFALYGYGDPSG 1337
Query: 972 R-GLGFSYV-RAAPKASVSSAMVKKKAAANRGGSTVTGTDADLRRLSMEAAREVLLKFNV 1029
G G + + R A SV S +N G DLR+LSM+ R+ LL + V
Sbjct: 1338 NLGEGINLLKRQANDTSVDS--------SNAG--------EDLRKLSMDELRKRLLCYGV 1381
Query: 1030 PEEMIAKQTRWHRIAMIRKLSSEQAASG 1057
+++I RW ++A++RK G
Sbjct: 1382 SKDVIKTLPRWDQVALVRKYRDSFGGQG 1409
>gi|336363329|gb|EGN91728.1| hypothetical protein SERLA73DRAFT_118262 [Serpula lacrymans var.
lacrymans S7.3]
Length = 584
Score = 103 bits (258), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/165 (38%), Positives = 90/165 (54%), Gaps = 11/165 (6%)
Query: 653 AFKKKSDLSVKDGHVFLM-EYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNN 711
+K SDLS+KD F++ EY EE P ++ N GMG+ L YY+K D L
Sbjct: 411 GLRKTSDLSLKDTSNFVLWEYSEEHPPIIPNFGMGSALVNYYRKKDDKDDYMPKLD---- 466
Query: 712 CLGNVLTLEPGDKSPFL--GDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSA-KG- 767
LG LEP D+SPF+ G + G + +L N+ RAP+F HK TDFL+VRSA KG
Sbjct: 467 -LGVPFVLEPQDESPFMKFGYVYPGQTFPALYNNLVRAPLFRHKAYPTDFLIVRSAIKGE 525
Query: 768 -KISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYR 811
+ IR I + V+ Q P+ EV P S+ + +R+ + Y+
Sbjct: 526 TRYFIREIKNLFVIGQTYPVTEVPGPHSRKITNTIKHRLQIIAYK 570
>gi|409083810|gb|EKM84167.1| hypothetical protein AGABI1DRAFT_67440 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 664
Score = 102 bits (254), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 111/233 (47%), Gaps = 17/233 (7%)
Query: 653 AFKKKSDLSVKDGHVFLM-EYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNN 711
+ K DLS++D F++ EY EE P ++SN GMG+ YY+K D+
Sbjct: 414 SLHKTGDLSLRDTSNFVLWEYSEEHPPIISNFGMGSAFVNYYRKKDEKDE-----YIPKA 468
Query: 712 CLGNVLTLEPGDKSPFL--GDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVR-----S 764
LG LEP D+SPF+ G + G + +L N+ R+P+F HK TDFL++R +
Sbjct: 469 ELGVPFVLEPQDESPFMKFGSVSPGQTVPALYNNLIRSPLFRHKSYPTDFLVIRRVIALT 528
Query: 765 AKGKISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPC 824
K IR I + V+ Q P+ EV P S+ + R+ + ++ + L
Sbjct: 529 GDSKYFIREIKNLYVLGQTYPVTEVPGPHSRKITNTIKYRLQIIAFKLLKKSPGERL--- 585
Query: 825 IGVDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLR 877
+ L FP+ +E +R++LK F + + ++ + I EG +R
Sbjct: 586 -KISRLMKYFPDQNELQMRQRLKVGVFYPMTVDNFDISLLRSLWSITGEGPIR 637
>gi|76154883|gb|AAX26283.2| SJCHGC03818 protein [Schistosoma japonicum]
Length = 207
Score = 99.8 bits (247), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 102/208 (49%), Gaps = 10/208 (4%)
Query: 852 LRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRLKHLGITQLTLPAS 911
+R G+ W ++ + +PSE ++R L PE C++ SM A RLK G + +
Sbjct: 2 FKRTGSDASWWVLRSDYRLPSEEEVRYLVSPEDCCAHYSMLAAELRLKDAGYGEKYIFVL 61
Query: 912 ISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENIERLEITGVGDPSG 971
+ + + D+ +E E++ PWN + ++A + LE+ GV DP+G
Sbjct: 62 DENQVEEEEDKE----GQPKMEDEVRAAPWNTTRAYLA----SQRGGCFLELHGVADPTG 113
Query: 972 RGLGFSYVR--AAPKASVSSAMVKKKAAANRGGSTVTGTDADLRRLSMEAAREVLLKFNV 1029
G FSY + A P A A + +G TVTGTDADLR+L + AR +L F +
Sbjct: 114 CGEAFSYSKTSAKPGALFRQAGGEVARGLLKGKRTVTGTDADLRKLHLRDARALLRSFGI 173
Query: 1030 PEEMIAKQTRWHRIAMIRKLSSEQAASG 1057
E + RW I M+R S+E+A G
Sbjct: 174 SEADLKTFKRWEIIDMVRFTSTERAKQG 201
>gi|294881032|ref|XP_002769210.1| hypothetical protein Pmar_PMAR007621 [Perkinsus marinus ATCC 50983]
gi|239872488|gb|EER01928.1| hypothetical protein Pmar_PMAR007621 [Perkinsus marinus ATCC 50983]
Length = 1049
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 111/450 (24%), Positives = 194/450 (43%), Gaps = 86/450 (19%)
Query: 654 FKKKSDLSVKDGHVF-LMEYCEERPLLLSNAGMGANLCTYYQKSS-------PGDQAGAL 705
+ ++S++D + L+E E+ P+L+ GM A L TY SS P D G +
Sbjct: 413 YNTPKEVSLRDESTYVLLEGVEQYPILMHQVGMSAYLNTYLPASSRVMSPAPPSDTLGRV 472
Query: 706 LCSGNNCL------GNVLTLEPGDKSPFLGDIKAGCSQSSL-ETNMYRAPVFTHKVATTD 758
+G++ GNV+ +P +G + +L E+ + RAP+F H+ TD
Sbjct: 473 RYAGDDGFIPGVYGGNVVRFDP----------MSGINSCTLIESVLLRAPLFEHQTDPTD 522
Query: 759 FLLVR------SAKGKIS---------------------IRRIDKVAVVAQQEPLMEVMS 791
FL +R ++KG+ IR + ++ + Q EPL++V
Sbjct: 523 FLFIRCQETVAASKGRGHNVKRSRKQQQQTDNTTKYINIIRPLQRLVCMGQAEPLVKVDP 582
Query: 792 PGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLSEAIIRKKLKECAF 851
P + +R+++ + F +R L P D++ F A R L+ F
Sbjct: 583 PLPAKINPLMRSRIVLETRKSFRHY-RRPLRP----DDVVRMF---GHANKRTTLER--F 632
Query: 852 LRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRLKHLGITQLTLPAS 911
+ + QV + + ++ + C +SM G+ RL G+T+L
Sbjct: 633 IAAANHELQVRPGQPMPQLDPSAEMSLV----ESCKMDSMLEGIRRLCERGVTKLVTGDR 688
Query: 912 ISSAMSQLPDEAIALAA----------ASHIERELQITPWNLSSNFVACTNQDRENIERL 961
I A+ ++ ++++ A +E EL+ TPW+LS+++ +
Sbjct: 689 IRQAVREIETHESSMSSRSKDERVRYDAMQVEAELKTTPWSLSNDYWEVVEGGKRGAF-F 747
Query: 962 EITGVGDPS-GRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLRRLSMEAA 1020
E + +GDPS GRG G SYVR + SV +A+ A+ G ++ DLR S +
Sbjct: 748 EFSHLGDPSGGRGEGVSYVRQ--QRSVDAALGAGGVAS---GQRLSQKLGDLRAKSAKEL 802
Query: 1021 REVLLKFNVPEEMIAKQTRWHRIAMIRKLS 1050
R+ + K PE +A RW ++R+LS
Sbjct: 803 RQDMRKLGTPEAQLAGLGRWE---LVRQLS 829
>gi|432093867|gb|ELK25722.1| Transcription initiation factor TFIID subunit 1 [Myotis davidii]
Length = 165
Score = 99.0 bits (245), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 92/179 (51%), Gaps = 17/179 (9%)
Query: 879 LAYPEHVCSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQI 938
+ PE C++ S++A RLK G + + A P+E + E++
Sbjct: 1 MVSPEQCCAHYSVRAAEQRLKDAGYGEKSFYA---------PEEEKEEDFQMKTDDEVRT 51
Query: 939 TPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAA 998
PWN + F+A + L++TGV D +G G GFSYV+ K + K
Sbjct: 52 APWNTTRAFIAAM----KGKCLLKVTGVADLTGCGEGFSYVKIPNKPTQQ----KDDKEP 103
Query: 999 NRGGSTVTGTDADLRRLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG 1057
TVTGTDADLRRLS++ A ++L KF VPEE I K + W I ++R +S+EQA SG
Sbjct: 104 QPVKKTVTGTDADLRRLSLKNANQLLRKFGVPEEEIKKLSHWEVIDVVRPMSTEQACSG 162
>gi|429965966|gb|ELA47963.1| hypothetical protein VCUG_00546 [Vavraia culicis 'floridensis']
Length = 905
Score = 98.6 bits (244), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/218 (33%), Positives = 107/218 (49%), Gaps = 38/218 (17%)
Query: 771 IRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDEL 830
+R+I V V Q P+ EV SP S+ L + NR+ V +RE+ + GLL +++L
Sbjct: 471 LRKISHVFTVGQTFPIEEVYSPHSRKLNIFCKNRLKVAAFREYQS---NGLLGASYIEDL 527
Query: 831 SVQFPNLSEAIIRKKLKECA--FLRRDGNGKQV-WSMKRTFHIPSEGDLRKLAYPEHVCS 887
FP SE RK LKE + F R GK+ + +K++ I +E DLR L PE+VC
Sbjct: 528 ---FPQFSEGSKRKWLKEYSDSFKR----GKETFYQLKKSASILNEEDLRILVTPENVCQ 580
Query: 888 YESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNF 947
YE+M RL+ G+ + + + E EL + PWNLS N+
Sbjct: 581 YEAMLCAEQRLRDCGL--------------EYKENVME-------EGELLLMPWNLSRNY 619
Query: 948 VACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKA 985
+ LE+ G GDP+G G GFS+V+ KA
Sbjct: 620 INYVGGR----GVLEMKGSGDPTGIGEGFSFVKGNVKA 653
>gi|440492325|gb|ELQ74900.1| Transcription initiation factor TFIID, subunit TAF1
[Trachipleistophora hominis]
Length = 898
Score = 98.6 bits (244), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 107/219 (48%), Gaps = 32/219 (14%)
Query: 768 KISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGV 827
K +R+I+ V Q P+ EV SP S+ L + NR+ V +RE+ GLL +
Sbjct: 461 KYFLRKINAAFTVGQTFPVEEVYSPHSRKLNIFCKNRLKVAAFREYQ---NNGLLSASYI 517
Query: 828 DELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCS 887
++L FP SE RK LKE + + G + + +K++ + +E DLR L PE+VC
Sbjct: 518 EDL---FPQFSEGSKRKWLKEYSDSFKRGK-ETFYQLKKSATVLNEEDLRGLVTPENVCQ 573
Query: 888 YESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNF 947
YE+M RL+ G+ + + + E EL + PWNLS NF
Sbjct: 574 YEAMLCAEQRLRDCGL--------------EYKENVME-------EGELLLMPWNLSRNF 612
Query: 948 VACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKAS 986
+ I LE+ G GDP+G G GFS+V+ KA+
Sbjct: 613 INYVGG--RGI--LEMKGPGDPTGIGEGFSFVKGNVKAA 647
>gi|238596854|ref|XP_002394165.1| hypothetical protein MPER_05992 [Moniliophthora perniciosa FA553]
gi|215462761|gb|EEB95095.1| hypothetical protein MPER_05992 [Moniliophthora perniciosa FA553]
Length = 449
Score = 98.2 bits (243), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 131/316 (41%), Gaps = 59/316 (18%)
Query: 674 EERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLTLEPGDKSPFL--GDI 731
EE P ++ N GMG++L YY+K D+ LG LEP D+SPF+ G +
Sbjct: 82 EEHPPIIPNFGMGSSLVNYYRKKDEKDEHIPKFD-----LGVPFVLEPQDESPFMKFGYV 136
Query: 732 KAGCSQSSLETNMYRAPVFTHKVATTDFLLVRS-AKG--KISIRRIDKVAVVAQQEPLME 788
G + +L N+ RAP+F HK TDFL+VRS KG K +R I + V+ Q P+ E
Sbjct: 137 YPGQTVPALYNNLIRAPLFRHKCKPTDFLVVRSTVKGEPKYYLREIKNLFVIGQTYPVTE 196
Query: 789 VMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSVQFPNLSEAIIRKKLKE 848
V P S+ + R+ + ++ ++RK E
Sbjct: 197 VPGPHSRKITNTIKYRLQIIAFK-----------------------------LLRKNATE 227
Query: 849 CAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRLKHLGITQLTL 908
L RD V+S I + L V + G Y L Q+
Sbjct: 228 IEGL-RDATFMGVYSQXDISGIHGVSSAKTLI---RVSGRLKPRPGRYLL-----MQICD 278
Query: 909 PASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENIERLEITGVGD 968
+A S DEA H+ E Q+ PW + NF+ T L + G GD
Sbjct: 279 SGYSETAESADGDEA-------HLSVEQQLAPWITTKNFLYATQAK----AMLRLHGDGD 327
Query: 969 PSGRGLGFSYVRAAPK 984
P+GRG FS++R + K
Sbjct: 328 PTGRGEAFSFIRISMK 343
>gi|452825598|gb|EME32594.1| transcription initiation factor TFIID subunit D1 isoform 1
[Galdieria sulphuraria]
Length = 1401
Score = 97.1 bits (240), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 137/308 (44%), Gaps = 20/308 (6%)
Query: 666 HVFLMEY-CEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLTLEPGDK 724
+V L+EY E P+L+ GM + L Y + + + N NV L P +
Sbjct: 557 NVILLEYGLEHTPVLVPLPGMASRLVKYTRLKTGDTKTKEDGHFSTNFFHNVY-LAPDEP 615
Query: 725 SPFL-GDIKAGCSQSSLETNMYRAPVFTHKVATTDFLL----VRSAKGKISIRRIDKVAV 779
P GD+K G S + LE++++ AP TDFLL V + IR+ID V
Sbjct: 616 PPLCSGDVKPGQSVTILESSLFLAPAEILTPRKTDFLLTMKRVDNNSYSCFIRKIDHVIT 675
Query: 780 VAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGL---LPCIGVDE--LSVQF 834
V Q EP M VM+P + + + +R+L+ V E + GL L VDE F
Sbjct: 676 VGQTEPRMNVMAPNTDRFRKFVRDRVLLYVVLECLRIRREGLPLELSRAQVDEEFFRHSF 735
Query: 835 PNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAG 894
P + + + +KE A+L + G K V K F + + L+ + PE + SYESM+ G
Sbjct: 736 P---RSAVERTIKELAYLEK-GVFKVV-EPKEGFEVLRDMLLKSVT-PEVLASYESMEYG 789
Query: 895 LYRLKHLGITQLTLPASISSAMS--QLPDEAIALAAASHIERELQITPWNLSSNFVACTN 952
++ +GI T P + ++ + A A +I R L TPW + +
Sbjct: 790 WSIIQQVGIHMFTHPTAHGDLINAGEKAGTADGKEVADYIRRNLYRTPWYRAEEMIKLQK 849
Query: 953 QDRENIER 960
+ I R
Sbjct: 850 KQLREINR 857
>gi|452825599|gb|EME32595.1| transcription initiation factor TFIID subunit D1 isoform 2
[Galdieria sulphuraria]
Length = 1416
Score = 96.7 bits (239), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 137/308 (44%), Gaps = 20/308 (6%)
Query: 666 HVFLMEY-CEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLTLEPGDK 724
+V L+EY E P+L+ GM + L Y + + + N NV L P +
Sbjct: 557 NVILLEYGLEHTPVLVPLPGMASRLVKYTRLKTGDTKTKEDGHFSTNFFHNVY-LAPDEP 615
Query: 725 SPFL-GDIKAGCSQSSLETNMYRAPVFTHKVATTDFLL----VRSAKGKISIRRIDKVAV 779
P GD+K G S + LE++++ AP TDFLL V + IR+ID V
Sbjct: 616 PPLCSGDVKPGQSVTILESSLFLAPAEILTPRKTDFLLTMKRVDNNSYSCFIRKIDHVIT 675
Query: 780 VAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGL---LPCIGVDE--LSVQF 834
V Q EP M VM+P + + + +R+L+ V E + GL L VDE F
Sbjct: 676 VGQTEPRMNVMAPNTDRFRKFVRDRVLLYVVLECLRIRREGLPLELSRAQVDEEFFRHSF 735
Query: 835 PNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAG 894
P + + + +KE A+L + G K V K F + + L+ + PE + SYESM+ G
Sbjct: 736 P---RSAVERTIKELAYLEK-GVFKVV-EPKEGFEVLRDMLLKSVT-PEVLASYESMEYG 789
Query: 895 LYRLKHLGITQLTLPASISSAMS--QLPDEAIALAAASHIERELQITPWNLSSNFVACTN 952
++ +GI T P + ++ + A A +I R L TPW + +
Sbjct: 790 WSIIQQVGIHMFTHPTAHGDLINAGEKAGTADGKEVADYIRRNLYRTPWYRAEEMIKLQK 849
Query: 953 QDRENIER 960
+ I R
Sbjct: 850 KQLREINR 857
>gi|429328504|gb|AFZ80264.1| hypothetical protein BEWA_031170 [Babesia equi]
Length = 1730
Score = 94.7 bits (234), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 141/564 (25%), Positives = 240/564 (42%), Gaps = 107/564 (18%)
Query: 650 PPGAFKKKSDLS-VKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQ-KSSPGDQAGALLC 707
P F SDLS + D V L EY E+ PLLLSN GM + + Y GDQ L
Sbjct: 797 PSNYFIHSSDLSLIDDCKVALFEYIEQYPLLLSNCGMVSRVDNYVNIPQEGGDQNMVSL- 855
Query: 708 SGNNCLGNVLTLEPG-DKSPFLGDIKAGCSQSSLETNMYRAPVFTH----------KVAT 756
LG ++ + G + + +IK G Q+ +E +++AP+F H +
Sbjct: 856 ---GPLGTMIPVNDGVELFGIIHNIKPGEGQAVVENMLFKAPIFVHPRPCTSASKSNLTD 912
Query: 757 TDFLLVRSA-KGKISIRRI-----DKVAV--VAQQEPLMEVMSPGSKN--------LQTY 800
TDFLLVRS K +++R + +AV V Q EP ME+ SP SK+ L+ +
Sbjct: 913 TDFLLVRSVDKDSVTVRLRPLTWKNSIAVYTVGQCEPKMEISSPNSKSYQDDAKSLLKAW 972
Query: 801 SINRMLV-NVY--REFSAAAKRGLLPCIGVDELSVQFPNL-SEAIIRKKLKEC-AFLRRD 855
++ ++ N+ + A++ P + E+ L S I + + +
Sbjct: 973 ALKSIMTGNILDTKHLRKEARKKFYPALSEKEIGHVLKQLESNPIFSTRPQALERMIHST 1032
Query: 856 GNGKQVWSMKRT----FHIPSEGDLRKLAYPEHVCSY---------ESMQ---------- 892
+ V S++ T + + S G + KL P+ + + E++Q
Sbjct: 1033 IKPEVVCSLESTRAGRYRLKSLG-ISKLKNPDRIATVYAKIHQEEKEALQHQQVAENKRK 1091
Query: 893 ----AGLYRLKHLGITQLTLPASISSAMSQLP-------DEAIALAAASHIERELQITPW 941
+ RL+ GIT L ++ L D + IE L+++PW
Sbjct: 1092 ELKSSYSKRLEARGITGPKLEQELNQFNIDLQCTIYGHLDNRMLSPQIRFIEELLKLSPW 1151
Query: 942 NLSSNFVACTNQDRENIERLEITGVGDPSG-RGLGFSYVRAAPKASVSSAMVKKKAAANR 1000
N++ + N + + + G DPSG RG + ++ V+ + N
Sbjct: 1152 NITRDARQVLNN--KGSAQFALYGFADPSGGRGEAINLLKR---------QVRDTSLEN- 1199
Query: 1001 GGSTVTGTDADLRRLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRK----LSSEQAAS 1056
T + DLR+LSME + L ++ V E I RW ++A++R+ +A
Sbjct: 1200 -----TSSGEDLRKLSMEELGKRLTRYGVSESYIKTLPRWDQVALVRQYRDGFGGHTSAE 1254
Query: 1057 GVQL----QQQTRGKCQEIWDRQVQSLSAADDDEIGSDSEHSDLDSFAGDLENLLDA--- 1109
G ++ + K +I RQ ++L DD EI + +H DS G+ +N++DA
Sbjct: 1255 GDNRWRIPPEEYQKKLNDILTRQKEAL-LPDDPEISDEEDH---DSNEGN-QNIVDALMD 1309
Query: 1110 EEFEEEESNYDTKHDKVEGVKGLK 1133
E E + N D + ++E ++ L+
Sbjct: 1310 EIDAESDKNDDLEMHELEILRQLR 1333
>gi|426201131|gb|EKV51054.1| hypothetical protein AGABI2DRAFT_182039 [Agaricus bisporus var.
bisporus H97]
Length = 595
Score = 94.7 bits (234), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 87/165 (52%), Gaps = 11/165 (6%)
Query: 653 AFKKKSDLSVKDGHVFLM-EYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNN 711
+ K DLS++D F++ EY EE P ++SN GMG+ YY+K D+
Sbjct: 414 SLHKTGDLSLRDTSNFVLWEYSEEHPPIISNFGMGSAFVNYYRKKDEKDE-----YIPKA 468
Query: 712 CLGNVLTLEPGDKSPFL--GDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVR-SAKG- 767
LG LEP D+SPF+ G + G + +L N+ R+P+F HK TDFL++R + KG
Sbjct: 469 ELGVPFVLEPQDESPFMKFGSVSPGQTVPALYNNLIRSPLFRHKSYPTDFLVIRNTVKGD 528
Query: 768 -KISIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYR 811
K IR I + V+ Q P+ EV P S+ + R+ + ++
Sbjct: 529 SKYFIREIKNLYVLGQTYPVTEVPGPHSRKITNTIKYRLQIIAFK 573
>gi|298705677|emb|CBJ28915.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1694
Score = 92.0 bits (227), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 98/192 (51%), Gaps = 25/192 (13%)
Query: 917 SQLPDEAIALAAASHIERELQITPWNLSSNFV---ACTNQDRENIERLEITGVGDPSGRG 973
+QL + A A ++ +ELQ+ PW L+ N++ T+ ++ L ++G+GDPSG G
Sbjct: 1011 TQLTELKRVRAVAQYMYKELQMVPWTLTINYLKRHGITSSPAASL--LMLSGMGDPSGCG 1068
Query: 974 LGFSYV-RAAPKASVSSAMV-KKKAAANRGGSTVTGTDADLRRLSMEAAREVLLKFNVPE 1031
GFS++ R A +A ++++ +K A R VTGT++DLRRL+M +P+
Sbjct: 1069 EGFSFLPRPAEQAKATASLTTSQKIVAERSVQKVTGTNSDLRRLTMLQLASTCEAMGIPK 1128
Query: 1032 EMIAKQTRWHRIAMIRKLSSEQAASGVQLQQ------------------QTRGKCQEIWD 1073
+ + RW R+ MI++L+ A V+ Q R C EIW+
Sbjct: 1129 DTVKTLRRWDRVHMIKELAGVAVAENVKDQNIYARFVRKRRPNATIDKDLYRATCNEIWE 1188
Query: 1074 RQVQSLSAADDD 1085
RQ +LSA +D
Sbjct: 1189 RQALALSATAED 1200
Score = 74.7 bits (182), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 86/195 (44%), Gaps = 41/195 (21%)
Query: 590 PSDFKPAESVKLFYLGKELEDHKSLADQNVRPNSLIHLI---RTKIHLLPRAQKL----- 641
P PAE L K ED ++L RP IH + + I LPR K
Sbjct: 538 PHHASPAEDKVLIAAPKSWEDIRNLH----RPRMQIHTLLPNQMSIVRLPRKPKALQGGG 593
Query: 642 ---------PGENKSLRPPGAFKKKSDLSVKDGH--VFLMEYCEERPLLLSNAGMGANLC 690
GE S+ ++ DL + H ++EY EERP LL + GM + +
Sbjct: 594 QGGGGFGARIGEVVSM----PMHREKDLLPLESHSTFVVVEYVEERPPLLGSTGMASTII 649
Query: 691 TYYQKSSPGDQAGALLCSGNNCLGNV--LTLEPGDKSPFLGDIKAGCSQSSLETNMYRAP 748
T+ + SS +G + L P + SPFLG+I+ G Q+S+ ++RAP
Sbjct: 650 TFVRSSS------------RRPIGGIERRELSPQEDSPFLGEIRPGSEQASICNGLFRAP 697
Query: 749 VFTHKVATTDFLLVR 763
+F H +DFLL+R
Sbjct: 698 IFKHHAPDSDFLLIR 712
>gi|340382863|ref|XP_003389937.1| PREDICTED: transcription initiation factor TFIID subunit 1-like,
partial [Amphimedon queenslandica]
Length = 649
Score = 90.9 bits (224), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 83/168 (49%), Gaps = 36/168 (21%)
Query: 932 IERELQITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAM 991
I+ E++ PWN + +F+ + L ++G DP+G G GFSY R PK +
Sbjct: 25 IDDEVRAAPWNTTHHFINAMKGKYQ----LSVSGPADPTGCGEGFSYTRLNPKVYMPK-- 78
Query: 992 VKKKAAANRGGSTVTGTDADLRRLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSS 1051
TV GT+ADLR+L + AR VL F VPEE IAK +RW + ++R +S+
Sbjct: 79 ------------TVMGTEADLRKLKLSKARNVLRNFGVPEEEIAKLSRWKVVDLVRSIST 126
Query: 1052 EQAASG------------------VQLQQQTRGKCQEIWDRQVQSLSA 1081
E A SG + Q++ + +CQ ++D Q + L +
Sbjct: 127 EAARSGGAVDVSSLMFARGSRCSQSEAQERYKEECQRVFDIQNKVLCS 174
>gi|449522845|ref|XP_004168436.1| PREDICTED: uncharacterized protein LOC101224132 [Cucumis sativus]
Length = 129
Score = 89.7 bits (221), Expect = 1e-14, Method: Composition-based stats.
Identities = 42/56 (75%), Positives = 46/56 (82%)
Query: 27 GGNRLLGFMFGNVDYAGDLDVDYLDEDAKEHLAAVADKLGPSLTDIDVWNSQSCFQ 82
GGNR LGFMFGNVD +GDLD DYLDEDAKEHL A+ADKLGP+LTDID+ S Q
Sbjct: 25 GGNRFLGFMFGNVDNSGDLDADYLDEDAKEHLDALADKLGPTLTDIDLSTKSSRIQ 80
>gi|399216659|emb|CCF73346.1| unnamed protein product [Babesia microti strain RI]
Length = 1427
Score = 86.7 bits (213), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 146/601 (24%), Positives = 227/601 (37%), Gaps = 159/601 (26%)
Query: 635 LPRAQKLPGE----NKSLRPPGAFKKKSDLSVKDGHVF-LMEYCEERPLLLSNAGMGANL 689
LP + GE N + P F ++ DLS+ D F ++EY E+ P LSN GM + +
Sbjct: 641 LPLGMYMEGEKEETNLTHHPANYFLEEFDLSLSDDCSFAVLEYVEQFPFYLSNPGMASRV 700
Query: 690 CTYYQKS----------SPGDQAGALLCSGNNC--LGNVLTLEPGDKSPFLGDI-KAGCS 736
Y S +P + A A +N LG + + D G + K
Sbjct: 701 SRYLPTSGGPTGEAEDGNPNESAAAFDMFRDNARLLGPLGMVHKRDGIDMFGVMRKVRYG 760
Query: 737 QSSLETNMYRAPVFTHKV-------------ATTDFLLVRSAKGKISIRRI--------- 774
+ +E ++YRAP+F H + DFLL+R + + RRI
Sbjct: 761 MAVIENHLYRAPIFHHPLPQNVTDGTGTCTNTNCDFLLIRRSWWEDGERRIAIFLRQLVP 820
Query: 775 ------------DKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLL 822
+ V Q EP +EV +P SK N + V R S
Sbjct: 821 MVRSDSCGDYEGGALYTVGQCEPKLEVPAPDSKVYYEDMKNLIRAWVARRVSEWP----- 875
Query: 823 PCIGVDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYP 882
E + F L E K C + D + Q+ +K PS R + P
Sbjct: 876 ------EGTADFKRLRE---EAKATFCPHV-PDRDVAQI--VKSVEGQPSPEAARPIK-P 922
Query: 883 EHVCSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEAIAL----AAASHIERELQI 938
E VC ES +A L RL+ +GI+ L ++S + + +E A R+LQI
Sbjct: 923 ETVCLLESARAALQRLQLIGISSLQTVDRLASILMLIEEEERECDNRDRNAREFRRQLQI 982
Query: 939 ----------------------------------------------------TPWNLSSN 946
TPWN++ +
Sbjct: 983 EYEKRTEALGIADMARGPRSDFPADFTVSLYGHLGPKHFSPLVRFVEEALKLTPWNITRD 1042
Query: 947 F-VACTNQDRENIERLEITGVGDPS-GRGLGFSYVRAAPKASVSSAMVKKKAAANRGGST 1004
+ +N+ + + G DPS GRG + ++ K A R GS
Sbjct: 1043 CRLVLSNK---GSAQFMLYGFADPSGGRGEAINLLKRQ----------NKDAQHFRVGS- 1088
Query: 1005 VTGTDADLRRLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASG------- 1057
V GT DLR+LSM R+ LLK+ V +++I+ RW ++A++R+ S +G
Sbjct: 1089 VAGTLEDLRKLSMPELRKRLLKYGVSDQVISSLPRWDQVALVRQYRSGFGIAGDGADDFK 1148
Query: 1058 VQLQ-QQTRGKCQEIWDRQVQSLSAAD---DDEIGSDSEHS------DLDSFAGDLENLL 1107
+L ++ + + +I DRQ +L+ +D D+E D S +LD +L L
Sbjct: 1149 FRLAPEEYQRRINQILDRQHLALALSDPAVDEEAALDGSSSVGDQGLELDDLVDELAGEL 1208
Query: 1108 D 1108
D
Sbjct: 1209 D 1209
>gi|159489496|ref|XP_001702733.1| TafII-250 protein [Chlamydomonas reinhardtii]
gi|158280755|gb|EDP06512.1| TafII-250 protein [Chlamydomonas reinhardtii]
Length = 625
Score = 83.6 bits (205), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 133/341 (39%), Gaps = 94/341 (27%)
Query: 723 DKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISIRRIDKVAVVAQ 782
+ +PF + G + ++T+M++AP H +DFLLVR+ G + +R + V Q
Sbjct: 190 ENTPFYTPLPPGLTVLCVDTHMFKAPAAPHDPRPSDFLLVRAPHGFVQLRELTGTLTVGQ 249
Query: 783 QEPLMEVMSPG-SKNLQTYSINRMLVNVYREFSAAAKR--GLLPCIGVDELSVQFPNLSE 839
Q P V P ++ ++ Y+ NR+ V V R K+ P + + E+S Q P +
Sbjct: 250 QHPHERVPDPWDAEWIKGYNGNRVFVAVARALQRKEKQNPAAKPFVTLKEISDQLPGIPR 309
Query: 840 AIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRLK 899
E LR++ P+ VC+YESM+A RLK
Sbjct: 310 E-------------------------------EEAKLREMLRPDVVCAYESMRAAELRLK 338
Query: 900 HLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENIE 959
LG+ + + + A + ER WN
Sbjct: 339 GLGLGHV---------------QHLTEVARNEPERWQAAADWN----------------- 366
Query: 960 RLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLRRLSMEA 1019
+TG +K+K A G T T D LR+L E
Sbjct: 367 --RVTG----------------------RPESLKEKPPAE-GSITGTDAD--LRKLGHEE 399
Query: 1020 AREVLLKFNVPEEMIAKQT-RWHRIAMIRKLSSEQAASGVQ 1059
A +L+ + V +E++ T RW RI ++RKL+++ A G +
Sbjct: 400 AGRMLMGWGVKKEVVDSMTNRWRRIDLVRKLATQAALEGTE 440
Score = 51.2 bits (121), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 34/53 (64%), Gaps = 4/53 (7%)
Query: 14 RDEDDEEEYEDVSGGNRLLGFMFGNVDYAGDLDVDYLDEDAKEHLAAVADKLG 66
R D EEE GG + +FGN+D G DVDYLDEDAK++L ++A +LG
Sbjct: 4 RRHDGEEE----DGGGIMGSILFGNIDEEGRADVDYLDEDAKQNLGSIAAQLG 52
>gi|209879025|ref|XP_002140953.1| bromodomain-containing protein [Cryptosporidium muris RN66]
gi|209556559|gb|EEA06604.1| bromodomain-containing protein [Cryptosporidium muris RN66]
Length = 1731
Score = 83.2 bits (204), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 130/582 (22%), Positives = 214/582 (36%), Gaps = 191/582 (32%)
Query: 626 HLIRTKIHLLPRAQKLPGENKSLRP----PGAFKKKSDLSVK-DGHVFLMEYCEERPLLL 680
+L + LL R + E+K P F DLS+ + L+EY E+ PLL+
Sbjct: 566 YLYNSNSQLLHRYLQRQKESKDTLPCINSSVCFISPEDLSLTHQTPIALLEYVEQYPLLM 625
Query: 681 SNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLTLEPGDKS----------PFLGD 730
+N GM A + + + ++ + + LG++ +E + P L
Sbjct: 626 NNLGMAARINRFIKSNTSDSDKFESILNLAGPLGSIHIVEDNKNNKSSNNTQQYHPKLFG 685
Query: 731 IKAGCSQ----SSLETNMYRAPVFTH----------------KVATTDFLLVRSA----- 765
++ ++ + LET ++ AP+F H + +TDFLL+R +
Sbjct: 686 VEYPITKDESVAILETGLFNAPIFYHPKKYNEKTNNKNYSQNDMFSTDFLLIRQSITNTS 745
Query: 766 -----KGKISIRRIDK-----VAVVAQQEPLMEVMSPGSKNL------------------ 797
K ++ +R + V V Q+EPL+EV SK
Sbjct: 746 SLSNFKCRLFLRPLSGDCLTCVYSVGQEEPLLEVPCIDSKTYIDLRRDHLRAIALRKSKE 805
Query: 798 ----QTYSINRMLVNVYREF--SAAAKRGLLPC-----------------------IGVD 828
T +I ++ N++R ++ LL C IGV
Sbjct: 806 NGRDSTDNIRQLCQNLFRGVFDPNVIQKILLSCKETRDSNTSNSTLSVSASSSSSNIGVT 865
Query: 829 ELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIP--SEGDLRKLAYPEHVC 886
+S P N S + +F I SE LR++ PE +C
Sbjct: 866 SISNTGP--------------------SNNALSSSPQSSFQIKQLSENKLREIITPELIC 905
Query: 887 SYESMQAGLYRLKHLGITQLTLPASISSAMSQLPD-EAIALAAA---------------- 929
+ +S AG +LK +GI L I +S+L E IA A
Sbjct: 906 ALDSAVAGDLKLKQIGIRSLRHFGKIPIVVSELDQMEGIAKKYADIARIKAKDIYKNKTI 965
Query: 930 ---------SHIEREL-----------------QITP-------------WNLSSNFV-A 949
H+ L ++TP WN++ ++
Sbjct: 966 NEGGVSTDSDHLASNLLRLINESSTGIINSNGRRLTPIARYIEEALLLSPWNITQEYIQV 1025
Query: 950 CTNQDRENIERLEITGVGDPS-GRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGT 1008
NQ+ + I G+GDPS GRG G + +R + + S M + +N
Sbjct: 1026 IKNQNGQ----FSIRGIGDPSGGRGEGINLIR---RGLIDSTMESRSQKSN-------NK 1071
Query: 1009 DADLRRLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLS 1050
+ DLR+LSM+ R+ LL++ E+ IA RW R+A++R S
Sbjct: 1072 NEDLRKLSMDQLRQRLLQYGFDEDAIAPLPRWDRVALVRHFS 1113
>gi|429963214|gb|ELA42758.1| hypothetical protein VICG_00073 [Vittaforma corneae ATCC 50505]
Length = 499
Score = 79.3 bits (194), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 108/216 (50%), Gaps = 23/216 (10%)
Query: 655 KKKSDLSVKDGHVF-LMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCL 713
KK +LS+ D F + EY EE P + N GM + + TYY+K D+ C+
Sbjct: 300 KKAHELSLSDSTPFKIFEYFEEFPFFVVNPGMVSLMSTYYRKMDSIDEPTIDGCT----- 354
Query: 714 GNVLTLEPGDKSPF--LGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLVRSAKGKISI 771
LE D++PF G+IK G +L N++ AP+ HK ++DFL + +I +
Sbjct: 355 ----VLEVEDEAPFYGFGNIKPGTYVPTLANNLFIAPIAPHK--SSDFLCIID-DDRIVM 407
Query: 772 RRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELS 831
R ID + +V Q+ P EV +P S+ L + +R+ V YR FS + + +L
Sbjct: 408 RPIDNIYLVGQEFPKEEVYAPHSRRLNQFCKDRLKVAAYRIFSKGKD------LQMQQLD 461
Query: 832 VQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRT 867
+ FP SE RK LKE + + GK ++ + +T
Sbjct: 462 LMFPYFSEGSKRKWLKEYSDCVK--KGKIIYGLLKT 495
>gi|336363328|gb|EGN91727.1| hypothetical protein SERLA73DRAFT_100192 [Serpula lacrymans var.
lacrymans S7.3]
gi|336387199|gb|EGO28344.1| hypothetical protein SERLADRAFT_458732 [Serpula lacrymans var.
lacrymans S7.9]
Length = 469
Score = 77.4 bits (189), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 105/265 (39%), Gaps = 62/265 (23%)
Query: 834 FPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQA 893
FP+ +E +R++LKE R G + W +K + IPS+ D+ K PE V ESMQ
Sbjct: 4 FPDQNELQMRQRLKEFMEYHRRGPHQGFWRLKSGWTIPSDADMLKSVTPEQVVLTESMQV 63
Query: 894 GLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQ 953
G L+ G +Q +A + + E Q+ PW + NF+ T
Sbjct: 64 GQRHLQDAGYSQTA--------------DAADGEDETKLSVEQQLAPWITTKNFLFATQA 109
Query: 954 DRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLR 1013
L + G GDP+GRG FS++R S+ VK G D + +
Sbjct: 110 K----AMLRLHGEGDPTGRGEAFSFIR----ISMKDIFVK------------AGEDYEQK 149
Query: 1014 RLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASGVQLQQQTRGKCQEIWD 1073
E + ++NV E+ QQ + + + IW
Sbjct: 150 LAEAENRPKSAHRYNVAEQ----------------------------QQIYKSEIERIWK 181
Query: 1074 RQVQSLSAADDDEIGSDSEHSDLDS 1098
Q SLS D+ E+ ++ E D +S
Sbjct: 182 AQFDSLSRKDEPELTAEDERRDRES 206
>gi|449016504|dbj|BAM79906.1| TATA-box binding protein-associated factor 1 [Cyanidioschyzon
merolae strain 10D]
Length = 1771
Score = 76.6 bits (187), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 138/321 (42%), Gaps = 41/321 (12%)
Query: 641 LPGENKSLRPPGAFKKKSDLS----VKDGHVFLMEY-CEERPLLLSNAGMGANLCTYYQK 695
LP E ++ P K SDLS G ++L EY E P L+ GM + L TY ++
Sbjct: 675 LPHEMRAWVP----KSWSDLSGISPKAGGDIYLFEYPLEADPFLVQLPGMASRLLTYSRR 730
Query: 696 SSPGDQAGALLCSGNNCLGNVLTLEPGDKSPF-LGDIKAGCSQSSLETNMYRAPVFTHKV 754
A S + + + L D P GD++ G E N + AP
Sbjct: 731 ------AADDTVSNPSEDPDTVYLAADDLPPLHTGDVRPGQVLRVYENNAFAAPFEPVSP 784
Query: 755 ATTDFLLVRSAKGKISIRRIDKVAVVAQQEP--LMEVMSPGSKNLQTYSINRMLVNVYRE 812
TDFL+V SA+ + +R I +V + + EP +VM P S ++ + N++ ++V RE
Sbjct: 785 PQTDFLVVCSAQRGLYVRPIKQVLAIGRLEPRNRPKVMIPNSDRMKRFVKNKIELDVTRE 844
Query: 813 FSAAAKRGLLPCIGVD--ELSVQFPN---LSEAIIRKKLKECAFLRRDGNGKQVWSMKR- 866
+RG GV+ E+ FP E I L+E N + + +K+
Sbjct: 845 L---IRRG---DTGVERSEVIQMFPRRRVYPETTIASVLRETC-----DNARNRYVIKKN 893
Query: 867 ---TFHIPSEGDLRKLAYPEHVCSYESMQAGLYRLKHLGITQLTLPA---SISSAMSQLP 920
T E +L + PE C++ESM+ G +L GIT + P+ +I +
Sbjct: 894 YVETVWPKRELELLRFVTPEETCAFESMEIGWEQLSAKGITIFSSPSMQGNIVGGAEKAG 953
Query: 921 DEAIALAAASHIERELQITPW 941
A + A +I EL T W
Sbjct: 954 LGARGIEIARYIREELAKTRW 974
Score = 45.8 bits (107), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Query: 18 DEEEYEDVS----GGNRLLGFMFGNVDYAGDLDVDYLDEDAKEHLAAVADKLGP 67
D E++D + L GF+FGNVD G L+ DYLD DAK L +A + P
Sbjct: 12 DSSEFQDANWPADAAPALSGFLFGNVDAEGRLEADYLDADAKASLHVIAPMVLP 65
>gi|294951734|ref|XP_002787110.1| hypothetical protein Pmar_PMAR004956 [Perkinsus marinus ATCC 50983]
gi|239901737|gb|EER18906.1| hypothetical protein Pmar_PMAR004956 [Perkinsus marinus ATCC 50983]
Length = 503
Score = 76.6 bits (187), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 151/349 (43%), Gaps = 61/349 (17%)
Query: 740 LETNMYRAPVFTHKVATTDFLLVR------SAKGKIS---------------------IR 772
+E+ + RAP+F H+ TDFL +R ++KG+ IR
Sbjct: 10 IESVLLRAPLFEHQTDPTDFLFIRCQETVAASKGRGHNVKRSRKQQQQTDNTTKYINIIR 69
Query: 773 RIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSV 832
+ ++ + Q EPL++V P + +R+++ + F +R L P D++
Sbjct: 70 PLQRLVCMGQAEPLVKVDPPLPAKINPLMRSRIVLETRKSFRHY-RRPLRP----DDVVR 124
Query: 833 QFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQ 892
F + ++ ++ F+ + QV + + ++ + C +SM
Sbjct: 125 MFGHANKRTTLER-----FIAAANHELQVRPGQPMPQLDPSAEMSLV----ESCKMDSML 175
Query: 893 AGLYRLKHLGITQLTLPASISSAMSQLPDEAIALAA----------ASHIERELQITPWN 942
G+ RL G+T+L I A+ ++ ++++ A +E EL+ TPW+
Sbjct: 176 EGIRRLCERGVTKLVTGDRIRQAVREIETHESSMSSRSKDERVRYDAMQVEAELKTTPWS 235
Query: 943 LSSNFVACTNQDRENIERLEITGVGDPS-GRGLGFSYVRAAPKASVSSAMVKKKAAANRG 1001
LS+++ + E + +GDPS GRG G SYVR + SV +A+ A
Sbjct: 236 LSNDYWEVVEGGKRGAF-FEFSHLGDPSGGRGEGVSYVRQ--QRSVDAAL---GAGGVAS 289
Query: 1002 GSTVTGTDADLRRLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLS 1050
G ++ DLR S + R+ + K PE +A RW ++R+LS
Sbjct: 290 GQRLSQKLGDLRAKSAKELRQDMRKLGTPEAQLAGLGRWE---LVRQLS 335
>gi|300121226|emb|CBK21607.2| unnamed protein product [Blastocystis hominis]
Length = 831
Score = 76.3 bits (186), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 107/550 (19%), Positives = 193/550 (35%), Gaps = 125/550 (22%)
Query: 653 AFKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNC 712
A + S+LS GH+ L+EY E +P + N GMGA + + P + N
Sbjct: 3 AIRSVSELSTNSGHLVLIEYSEPQPPMFLNQGMGAYIINWIDSECPEADYSQPVEGVNRV 62
Query: 713 LGNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLLV---------- 762
L+ + P +G ++ G Q S +++Y P+F H++ +TD+LL
Sbjct: 63 ------LKSNELMPLMGMLEKGQQQLSFCSSLYNTPLFQHELPSTDYLLTIQIESLREPF 116
Query: 763 --RSAKGKISIRRIDKVAVVAQQEPLMEVMSPGSKN-LQTY-SINRMLVNVYREFSAAAK 818
S + SIR+ D + + + EP M V PG K+ L T + L+ Y + K
Sbjct: 117 SPASQVYEASIRKADTLYLAGKMEPNMRVFLPGDKDYLSTMQQLEEYLLQKYIQKREFQK 176
Query: 819 RGLLPCIGVDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRK 878
GL +E ++K + M+ + + +L
Sbjct: 177 LGL---------------FNEEELKK-----------------YKMRNNYPVSVPRNLT- 203
Query: 879 LAYPEHVCSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPDEA--------------- 923
PE VC +S Q Y LK G++ + L + +SA + + ++
Sbjct: 204 ---PEQVCLMQSSQVSYYWLKDAGVSDI-LDFTTTSATTLMRNKENLELIYDYTNKQMIE 259
Query: 924 --------------------------------IALAAASHIERELQITPWNLSSNFVACT 951
I L AA+++ + T WNL+ +++
Sbjct: 260 LDKIVLGGLEGSMDSKTLAKRYFYHDMLYFINIELNAANYLVDRVCRTSWNLTDQYISAI 319
Query: 952 NQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDA- 1010
+ + + G+ +G +Y+ P S+ S K R TD+
Sbjct: 320 IEKKTRMSMTHDIYFGNLHEDTVGEAYL-YLPNKSLRSRKGKANGGQRRRRDPDQDTDSQ 378
Query: 1011 -------------------DLRRLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSS 1051
DLR L M R + P+ I RW + I +
Sbjct: 379 EELNEEDFQEKTEKPRKQPDLRTLKMGELRHIARDLGCPKAEIDVLDRWSLVGYIERHGK 438
Query: 1052 EQAASGVQLQQQTRGKCQEIWDRQVQSLSAADDDEIGSDSEHSDLDSFAGDLENLLDAEE 1111
+ +L+++ + + + + QV L + + + + S DL +
Sbjct: 439 NEYEDLFRLKKRNQQELNQDFQNQVNQLFREQCERLSQTTPEQFISSIKVDLNTSFPLGD 498
Query: 1112 FEEEESNYDT 1121
E++ N T
Sbjct: 499 LEKQALNSPT 508
>gi|323457025|gb|EGB12891.1| hypothetical protein AURANDRAFT_60961 [Aureococcus anophagefferens]
Length = 1834
Score = 73.6 bits (179), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 105/450 (23%), Positives = 173/450 (38%), Gaps = 118/450 (26%)
Query: 656 KKSDLSVKDGHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGN 715
+ +L DG + L+E EERP L++NAGM A LC +++ P D G +
Sbjct: 193 RDGELRAADGELLLLELSEERPPLVANAGMAAALCR-LRRARPADDFGDRAADARGFDVD 251
Query: 716 VLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTH-----KVATTDFLLVRSAKGKIS 770
V EP P LG+ Q +L ++ +RAPVF H TDFLL + + + +
Sbjct: 252 VPAAEP---WPLLGECAPDDEQLALVSDAFRAPVFPHGAPDAAAPVTDFLLCLAPRPRRA 308
Query: 771 ------------IRRIDK---VAVVAQQEPLMEVMSPG-----SKNLQTYSINRMLVNVY 810
+R +D VA+ Q EP +EV G + + + + R
Sbjct: 309 RRDGPPEPWTWVVRPLDGDHLVALQGQVEPRIEVPPLGRYAALQEPIAAFHVARAFAAAR 368
Query: 811 REFSAAAKRGLLPCIGVDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHI 870
AA + +P + ++ A++++ + + A R G+G +W + +
Sbjct: 369 TSREAAVREIAVPLDEIQRALFCNTHVPAALLKRAVADVAEKVR-GDGVDLWRARGV--V 425
Query: 871 PSEGDLRKLAY------------------------PEHVCSYESMQAGLYRLKHLGI--- 903
P D + PE VC+YES A L+ LG+
Sbjct: 426 PEGDDDDAVGGADAARRLAAAEVAVDADDVATRFAPEDVCAYESANAAARGLRTLGLEAP 485
Query: 904 TQLTLPASISSAMSQL------------------------PDEAIA-------------- 925
+L P+ + A+ L PD++
Sbjct: 486 EKLGGPSGAAVAVRALGRRCAAARKRAGDLRARARGAGAAPDDSAGRATAGATTLADVAA 545
Query: 926 ------------LAAASHIERELQITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRG 973
L AA + E+ + P +L+S FV + N L + G+GDPSG G
Sbjct: 546 AADRRAKTLERRLGAARRVHEEIGLAPAHLTSGFVDARIRG-ANFAILRLGGLGDPSGVG 604
Query: 974 LGFSYVRAAPKASVSSAMVKKKAAANRGGS 1003
GFS+ RA ++ + ++AA+R G+
Sbjct: 605 AGFSFARA--------SLAQFRSAASRTGA 626
>gi|385302754|gb|EIF46869.1| transcription initiation factor tfiid subunit 1 [Dekkera
bruxellensis AWRI1499]
Length = 800
Score = 72.4 bits (176), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 88/185 (47%), Gaps = 16/185 (8%)
Query: 809 VYREFSAAAKRGLLPCIGVDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTF 868
VYR ++ + LL V ++S FP ++ R++LKE +R G + W +K
Sbjct: 359 VYRILNSDEHQRLL----VKDISTHFPEHTDMQNRQRLKEFMEYQRSGEDQGFWKLKSHQ 414
Query: 869 HIPSEGDLRKLAYPEHVCSYESMQAG------LYRLKHLGITQLTLPASISSAMSQLPDE 922
+P R++ PE +C ESM+ + +L+ + + + +++ + +
Sbjct: 415 QVPGYETTREMISPEDICLLESMKCARQHFGDIEKLRRERLEXVDXNGAXTNSNANDTNR 474
Query: 923 AIALAAASHIE--RELQITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVR 980
+ A SH E +E+++ PWN + NF+ T + L+I G GDPS G FS+++
Sbjct: 475 DSSPAPTSHREELQEMELAPWNTTRNFIQAT----QGKAMLQIHGKGDPSSNGSAFSFLK 530
Query: 981 AAPKA 985
K
Sbjct: 531 IXMKG 535
>gi|392570774|gb|EIW63946.1| hypothetical protein TRAVEDRAFT_61778 [Trametes versicolor FP-101664
SS1]
Length = 459
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 103/257 (40%), Gaps = 63/257 (24%)
Query: 834 FPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQA 893
FP +E +R++LKE R G + W +K + IPS+ D+ K+ PE V ESMQ
Sbjct: 4 FPEQNELQMRQRLKEFMEHHRRGPHQGFWRLKGNWTIPSDADMLKMVTPEQVVLSESMQV 63
Query: 894 GLYRLKHLGITQLTLPASISSAMSQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQ 953
G L+ G + + +A ++ E Q+ PW + NF+ T
Sbjct: 64 GQRHLQDSGYSF---------------NGEVAEEDEGNLSIEQQLAPWITTKNFLFATQA 108
Query: 954 DRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSAMVKKKAAANRGGSTVTGTDADLR 1013
L++ G GDP+GRG FS++R S+ VK G D + +
Sbjct: 109 K----AMLKLHGEGDPTGRGEAFSFIR----VSMKDIFVK------------AGEDYEQK 148
Query: 1014 RLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRKLSSEQAASGVQLQQQTRGKCQEIWD 1073
E+ + ++NV E+ QQ + + + IW
Sbjct: 149 LAEAESRPKSAHRYNVAEQ----------------------------QQIYKSEIERIWK 180
Query: 1074 RQVQSLSAADDDEIGSD 1090
Q SLS D+ E+ ++
Sbjct: 181 AQFDSLSRKDEPELTAE 197
>gi|357136878|ref|XP_003570030.1| PREDICTED: transcription initiation factor TFIID subunit 1-like
[Brachypodium distachyon]
Length = 79
Score = 65.5 bits (158), Expect = 2e-07, Method: Composition-based stats.
Identities = 37/70 (52%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
Query: 3 GYDSGSASKDGRDEDDEEEYEDVSGGNRLLGFMFGNVDYAGDLDVDYLDEDAKEHLAAVA 62
GY+ + S D D E+Y G N LG MFGNV+ GDLD +LDED KE L A+A
Sbjct: 8 GYEIPTTSAAADDHD--EDYVQPGGWNHFLGLMFGNVNDYGDLDAHHLDEDPKELLFALA 65
Query: 63 DKLGPSLTDI 72
DKLGPSL I
Sbjct: 66 DKLGPSLKGI 75
>gi|67614062|ref|XP_667345.1| bromodomain [Cryptosporidium hominis TU502]
gi|54658471|gb|EAL37114.1| bromodomain [Cryptosporidium hominis]
Length = 1966
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 63/123 (51%), Gaps = 13/123 (10%)
Query: 928 AASHIERELQITPWNLSSNFVACTNQDRENIERLEITGVGDPSG-RGLGFSYVRAAPKAS 986
A +IE L ++PWN++ + R + I G+GDPSG RG G +++R +
Sbjct: 1161 VARYIEESLLLSPWNITQEYGQVM---RHQNGQFSIAGIGDPSGGRGEGVNFIR---RGL 1214
Query: 987 VSSAMVKKKAAANRGGSTVTGTDADLRRLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMI 1046
+ SA+ + A + G DLR+LSM+ R+ LL+ + + I RW R+A++
Sbjct: 1215 IDSAIESRSQKA------LAGKSEDLRKLSMDQLRQRLLQCGLDDVAIIPLPRWDRVALV 1268
Query: 1047 RKL 1049
R
Sbjct: 1269 RHF 1271
>gi|66356982|ref|XP_625669.1| ZnKn (C2HC)+Athook+bromo domain protein, Taf250, transcription
initiation factor IID [Cryptosporidium parvum Iowa II]
gi|46226686|gb|EAK87665.1| ZnKn (C2HC)+Athook+bromo domain protein, Taf250, transcription
initiation factor IID [Cryptosporidium parvum Iowa II]
Length = 1965
Score = 64.7 bits (156), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 62/123 (50%), Gaps = 13/123 (10%)
Query: 928 AASHIERELQITPWNLSSNFVACTNQDRENIERLEITGVGDPSG-RGLGFSYVRAAPKAS 986
A +IE L ++PWN++ + R + I G+GDPSG RG G +++R +
Sbjct: 1161 VARYIEESLLLSPWNITQEYGQVM---RHQNGQFSIAGIGDPSGGRGEGVNFIR---RGL 1214
Query: 987 VSSAMVKKKAAANRGGSTVTGTDADLRRLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMI 1046
+ SA+ + A + G DLR+LSM+ R+ LL+ + I RW R+A++
Sbjct: 1215 IDSAIESRSQKA------LAGKSEDLRKLSMDQLRQRLLQCGFDDVAIIPLPRWDRVALV 1268
Query: 1047 RKL 1049
R
Sbjct: 1269 RHF 1271
>gi|402467565|gb|EJW02845.1| hypothetical protein EDEG_02786 [Edhazardia aedis USNM 41457]
Length = 1156
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 79/180 (43%), Gaps = 19/180 (10%)
Query: 717 LTLEPGDKSPF-LGDIKAGCSQSSLETNMYRA---PVFTHKVATTDFLLVRSAKGKISIR 772
+ L D SP L ++ L NM++A P H + F + + IR
Sbjct: 565 INLSETDPSPLPLVEMTPDIPTFILTNNMFKAVLTPYIPHNLFLISFNDINLSNS--VIR 622
Query: 773 RIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDELSV 832
I+ + +Q P+ME+ SP SK+L Y NR+ + R + + I + +L
Sbjct: 623 PINTIFCASQTLPIMEIYSPHSKSLNIYCKNRLKQSALRMLEKFDGKDFV--IKMKDLDE 680
Query: 833 QFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRK-LAYPEHVCSYESM 891
FP SE + RK LKE A R+D ++ + G +++ PEHVC YE M
Sbjct: 681 MFPTFSEGLKRKWLKEFAEKRKDN----------SYVLNLRGYIKEDTLSPEHVCQYEGM 730
>gi|84999366|ref|XP_954404.1| Bromodomain protein [Theileria annulata]
gi|65305402|emb|CAI73727.1| Bromodomain protein, putative [Theileria annulata]
Length = 1904
Score = 60.8 bits (146), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 65/123 (52%), Gaps = 10/123 (8%)
Query: 927 AAASHIERELQITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKAS 986
A +IE+ L++T WN++++ + + + G+GDPS GL + ++ +
Sbjct: 1250 ARVGYIEKILKLTSWNIANDVRMVLKGNGQ----FSLYGLGDPSNSGLAINLLKRQIYTN 1305
Query: 987 VSSAMVKKKAAANRGGSTVTGTDA-DLRRLSMEAAREVLLKFNVPEEMIAKQTRWHRIAM 1045
+++ M +N ++ G + DLR+LSME + LL + V E +I RW ++A+
Sbjct: 1306 INTNM-----GSNIYNISIVGNNYEDLRKLSMEELSKRLLMYGVSEAVIKTLPRWDQVAL 1360
Query: 1046 IRK 1048
+R+
Sbjct: 1361 VRQ 1363
Score = 59.7 bits (143), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 76/346 (21%), Positives = 129/346 (37%), Gaps = 102/346 (29%)
Query: 654 FKKKSDLSVKD-GHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNC 712
F +DLS+ D + L+EY E+ PLLL+N GM + + TY S + + N
Sbjct: 838 FVNSADLSLNDDTKIVLLEYVEQYPLLLNNIGMTSRIDTYINSSGGNGRDNGEQNNKENV 897
Query: 713 LGNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVF---------------------- 750
LGNV+ + +K QS ++ +++AP+F
Sbjct: 898 LGNVVYNNEYELFGVNHQLKPNEIQSIVDNTLFKAPIFYPLNSNEGMERKKKTLFCPENT 957
Query: 751 ----------THKVATT-------------------DFLLVRSAKGKIS----------- 770
T K+ T DF++ RS+ S
Sbjct: 958 QFDREKTQPETEKIKVTSNRVLNNNNDILNLGIPMYDFIMTRSSINSQSNQPNETNSGAD 1017
Query: 771 ----IRRIDK--VAVVAQQEPLMEVMSPGSKN--------LQTYSINRMLVNV---YREF 813
IR +D + V Q EP + + SP SKN L+ + + ++N +
Sbjct: 1018 ELLYIRELDNSLLCTVGQCEPKITINSPKSKNYLEDNKLLLKAWVLKTAMINPLTDMKRL 1077
Query: 814 SAAAKRGLLPCIGVDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSE 873
A++ P I E++ + K+++ + ++SM+ E
Sbjct: 1078 RKVARKKFYPVIPEKEITA---------VLKQVESTS----------IFSMRPQ---ALE 1115
Query: 874 GDLRKLAYPEHVCSYESMQAGLYRLKHLGITQLTLPASISSAMSQL 919
++ PE VCS ES ++ +R+K GI++L IS S L
Sbjct: 1116 KMIQATIKPEVVCSLESTRSQKFRVKSRGISRLMSHEGISVVCSIL 1161
>gi|71032425|ref|XP_765854.1| hypothetical protein [Theileria parva strain Muguga]
gi|68352811|gb|EAN33571.1| hypothetical protein TP01_0327 [Theileria parva]
Length = 2132
Score = 60.5 bits (145), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 124/336 (36%), Gaps = 89/336 (26%)
Query: 654 FKKKSDLSVKD-GHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNC 712
F +DLS+ D V L+EY E+ PLLL+N GM + + TY SS D + N
Sbjct: 962 FVNSTDLSLTDDTRVVLLEYVEQYPLLLNNIGMTSRIDTYINTSSNKDNSDQ--NQKENV 1019
Query: 713 LGNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVF---------------------- 750
LGNV+ + +K QS ++ +++AP+F
Sbjct: 1020 LGNVVYTNEYELFGVNHTLKTNEMQSIVDNTLFKAPIFYTINEVERKKNLNAENKGDSEE 1079
Query: 751 -------------THKVATT------------DFLLVRSAKGK--------------ISI 771
+KV DF++ RS + I
Sbjct: 1080 SQVEQENNQPPPVNNKVLYNNNDITGLGMPMFDFIITRSTNNPANQSAGEQTSNEELLYI 1139
Query: 772 RRIDK--VAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAAKRGLLPCIGVDE 829
R +D + V Q EP + + +P SKN N++L+ + +A P +
Sbjct: 1140 RELDNSVLCTVGQCEPKITINNPKSKNY--LEDNKLLLKAWVLKTAMIN----PMTDMKR 1193
Query: 830 LSVQFPNLSEAIIRKKL------KECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPE 883
L + RKK KE + + ++SM+ E ++ PE
Sbjct: 1194 L--------RKVARKKFYPVIPEKEITGVLKQVESTSIFSMRPQ---ALEKMIQATIKPE 1242
Query: 884 HVCSYESMQAGLYRLKHLGITQLTLPASISSAMSQL 919
VCS ES +A +R+K GI +L IS S L
Sbjct: 1243 VVCSLESTRAQKFRIKSRGIRRLMSHEGISVVCSIL 1278
Score = 57.4 bits (137), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 65/121 (53%), Gaps = 10/121 (8%)
Query: 929 ASHIERELQITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVS 988
S+IE+ L+++ WN++++ + + + G+GDPS GL + ++ +++
Sbjct: 1406 VSYIEKILKLSSWNIANDVRMVLKGNGQ----FSLYGLGDPSNCGLAINLLKRQIYTNIN 1461
Query: 989 SAMVKKKAAANRGGSTVTGTDA-DLRRLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIR 1047
+ M +N ++ G + DLR+LSM+ + LL + V E +I RW ++A++R
Sbjct: 1462 TNM-----GSNIYNISIIGNNYEDLRKLSMDELSKRLLMYGVSEAVIKTLPRWDQVALVR 1516
Query: 1048 K 1048
+
Sbjct: 1517 Q 1517
>gi|123473155|ref|XP_001319767.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121902558|gb|EAY07544.1| conserved hypothetical protein [Trichomonas vaginalis G3]
Length = 394
Score = 57.4 bits (137), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 46/103 (44%), Gaps = 7/103 (6%)
Query: 660 LSVKDGHVF-LMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNNCLGNVLT 718
LS ++G + L+E E P + N GM + L TYY S D+ +
Sbjct: 286 LSARNGKIMILLEIVSENPPFILNVGMASQLVTYYHMRSSDDKPRL------ETDTRISY 339
Query: 719 LEPGDKSPFLGDIKAGCSQSSLETNMYRAPVFTHKVATTDFLL 761
+EP SP L I G ++ N++ PV H V TDFLL
Sbjct: 340 IEPDQLSPMLAPIPKGTPFCTIANNLFEIPVAKHPVENTDFLL 382
>gi|401398262|ref|XP_003880257.1| putative bromodomain-containing protein [Neospora caninum Liverpool]
gi|325114667|emb|CBZ50222.1| putative bromodomain-containing protein [Neospora caninum Liverpool]
Length = 2983
Score = 55.1 bits (131), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 125/332 (37%), Gaps = 81/332 (24%)
Query: 643 GENKSLRPPGAFKKKSDLSVKD-GHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGD- 700
GE +++ F DLS++D + + EY E++PLL++N GM + ++ +P +
Sbjct: 1835 GERETIHLANHFYTPQDLSLRDDAPIAVFEYMEQQPLLMNNPGMAVRIIRHFLPPTPPNS 1894
Query: 701 ---------QAGALLCSGNNCLGNVLTLEPGDKSPFLG---DIKAGCSQSSLETNMYRAP 748
QA L G + + K G + G Q+ E+ + +AP
Sbjct: 1895 ELTRQEQVQQAERQLKGRLGPFGELQLQQDDAKIILFGARLPLSRGQGQAVAESPLLKAP 1954
Query: 749 VFTHKVAT---------------TDFLLVRSA---KGKISIRRI---------------- 774
V+ H TDF+LVR+ + K+ +R +
Sbjct: 1955 VYIHPSTPNLPVKRESRFHDYRDTDFILVRTRAKDRCKVYLRPLLYPPPEKSACRSGFPF 2014
Query: 775 -----------------DKVAVVAQQEPLMEVMSPGSKNLQTYSINRMLVNVYREFSAAA 817
V V Q EP MEV +P SK + +R L AA
Sbjct: 2015 HRASGLESLSVLGSPANCGVYTVGQCEPRMEVHAPNSKK---HVDDRKLHAKAWALRFAA 2071
Query: 818 KRGLLPCIGVDELSVQFPNLSEAIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGD-- 875
+R + V +L Q +I K++ + ++ S +P D
Sbjct: 2072 ERNVTDMKRVKDLVKQ--RFCPPVIEKEVTQML---------KLLSPIAPHRLPRLDDVA 2120
Query: 876 LRKLAYPEHVCSYESMQAGLYRLKHLGITQLT 907
LR + PE +C E+ A LYRLK +GI LT
Sbjct: 2121 LRSIIRPELICCLEAAHAALYRLKAIGIMTLT 2152
Score = 53.9 bits (128), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 66/148 (44%), Gaps = 34/148 (22%)
Query: 932 IERELQITPWNLSSNFV-ACTNQDRENIERLEITGVGDPSG-RGLGFSYV----RAAPKA 985
IE L +TPWNL+ TN+ + +TG GDPSG RG G S + R
Sbjct: 2249 IEELLLLTPWNLTKECKDVLTNK---GSAQFMLTGFGDPSGGRGEGVSLIKRLNRERSGL 2305
Query: 986 SVSSAMVKKKAAANRGGST-------------------------VTGTDADLRRLSMEAA 1020
S S M + + +R G+ V GT DLR+LSM+
Sbjct: 2306 SFLSGMGRNFGSFSRDGARSLAGAFGPGGIFLGAHLGPAAMSGGVAGTGEDLRKLSMQEL 2365
Query: 1021 REVLLKFNVPEEMIAKQTRWHRIAMIRK 1048
R L+++ + E +I RW ++A++R+
Sbjct: 2366 RRRLIQYGLSESVIRTLPRWDQVALVRQ 2393
>gi|403220699|dbj|BAM38832.1| predicted protein [Theileria orientalis strain Shintoku]
Length = 2694
Score = 54.3 bits (129), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 59/118 (50%), Gaps = 8/118 (6%)
Query: 931 HIERELQITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPKASVSSA 990
+IE+EL+++ WN++ + + + + G+GDPS GL S + K V++
Sbjct: 1744 YIEKELKLSNWNITHDVKMVLKGNGQ----FSLHGLGDPSNSGLALSLI----KRQVNTG 1795
Query: 991 MVKKKAAANRGGSTVTGTDADLRRLSMEAAREVLLKFNVPEEMIAKQTRWHRIAMIRK 1048
S V ++ DLR+LSM+ + L + V E +I RW ++A++R+
Sbjct: 1796 GSASTTGNVYNMSLVGQSNEDLRKLSMDELSKRLQLYGVSEAIIKTLPRWDQVALVRQ 1853
Score = 45.4 bits (106), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 51/101 (50%), Gaps = 9/101 (8%)
Query: 654 FKKKSDLSVKD-GHVFLMEYCEERPLLLSNAGMGANLCTYYQKSSPGDQAGALLCSGNN- 711
F DLS+ D + L+EY E+ PLL++N GM + + TY + AG + ++
Sbjct: 1007 FVNSEDLSLADDTKLVLLEYVEKYPLLMNNLGMTSRVDTYINTN-----AGEGIFKQSHK 1061
Query: 712 --CLGNVLTLEPGDKSPFLGDIKAGCSQSSLETNMYRAPVF 750
LGNV + + +K +QS LE ++RAP+F
Sbjct: 1062 KGVLGNVTYAQEYELFGVQHRLKNNETQSILENTLFRAPIF 1102
>gi|422293620|gb|EKU20920.1| transcription initiation factor TFIID subunit 1, partial
[Nannochloropsis gaditana CCMP526]
Length = 390
Score = 53.1 bits (126), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 113/275 (41%), Gaps = 70/275 (25%)
Query: 770 SIRRIDKVAVVAQQEPLMEVMSPGSKNLQTYSINRM--LVNVYREFSAAAKRGLLPCIGV 827
++R I +V + Q EPL EV P + + +R+ L V + G+ + V
Sbjct: 20 AVREIPRVYLSGQMEPLREVFHPDDGRFREFR-DRLIKLALVVKLHGGERGAGMDRRVSV 78
Query: 828 DELSVQFPNLSE----------------AIIRKKLKECAFLRRDGNGKQVWSMKRTFHIP 871
+L F L++ ++ +LK+ A + + + WS+ +
Sbjct: 79 IDLVRLFDGLADYLPDAGPGRDKEREKAVLVLNQLKQVAHELQGKHTENHWSLNNDVVV- 137
Query: 872 SEGDLRKLAYPEHVCSYESMQAGLYRLKHLGITQLT-----LPASISSAMSQ-------- 918
E LR+++ PE VC +ESM +G+ RL GI+ + PA I +++
Sbjct: 138 -EDVLREIS-PEEVCIFESMCSGVRRLLSEGISIVGRVTSFAPARIEPILARNLQCLLQD 195
Query: 919 ---------------------LPDEAIA-------------LAAASHIERELQITPWNLS 944
L E +A +A +++ EL + PW+L+
Sbjct: 196 RQARAEKARRSAELLKGGERGLEAEEVANMLQVLYEEVRQLIAVGAYLLDELYLAPWSLT 255
Query: 945 SNFVACTNQDRENIERLEITGVGDPSGRGLGFSYV 979
+ A TN+ ++TG+GDPSG G GFS++
Sbjct: 256 HFYHAITNEKAYG-GIFKLTGLGDPSGIGEGFSFL 289
>gi|221503911|gb|EEE29588.1| bromodomain-containing protein, putative [Toxoplasma gondii VEG]
Length = 2648
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 132/351 (37%), Gaps = 97/351 (27%)
Query: 638 AQKLPGENKSLRPPG-----------AFKKKSDLSVKD-GHVFLMEYCEERPLLLSNAGM 685
A++ PG +LR G F DLS++D + ++EY E++PLL+ N GM
Sbjct: 1496 AERGPGTTGALRLDGEGSGETIHLANLFYTPQDLSLRDDAPIAVLEYMEQQPLLMHNPGM 1555
Query: 686 GANLCTYY----QKSSPGDQAGALLCSGNNCLGNV-----LTLEPGD-KSPFLGD---IK 732
+ ++ +S +A L+ + G + L L+ D K G +
Sbjct: 1556 AIRIVRHFVPHNAPNSELSRADQLVHAERQVKGRLGPFGELQLQQDDAKLTLFGTRLPLA 1615
Query: 733 AGCSQSSLETNMYRAPVFTHKVAT---------------TDFLLVR-------------- 763
G Q+ E+ + +APV+ H A TDF+LVR
Sbjct: 1616 RGQGQAVAESPLLKAPVYVHPTAPNAPVKRDSRFHDYRDTDFILVRTRAKDRCKVYLRPL 1675
Query: 764 --------SAKGKISIRRID---------------KVAVVAQQEPLMEVMSPGSKNLQTY 800
SA+ S R V V Q EP MEV +P SK +
Sbjct: 1676 LYPPPEKNSAREGFSFYRSGGSLESLSVLGSPANCGVYTVGQCEPRMEVHAPNSKK---H 1732
Query: 801 SINRMLVNVYREFSAAAKRGLLPCIGVDELSVQ--FPNLSEAIIRKKLKECAFLRRDGNG 858
+R L AA++ + V +L Q P + E + + LK
Sbjct: 1733 VEDRKLHAKAWALRFAAEKNVTDMKRVKDLVKQRFCPPVVEKEVTQMLK----------- 1781
Query: 859 KQVWSMKRTFHIPSEGD--LRKLAYPEHVCSYESMQAGLYRLKHLGITQLT 907
+ S +P D LR + PE +C E+ A L+RLK +GI LT
Sbjct: 1782 --LLSPIAPHRLPRLDDAALRSIIRPELICCLEAAHAALFRLKAIGIMTLT 1830
Score = 45.4 bits (106), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 62/146 (42%), Gaps = 32/146 (21%)
Query: 932 IERELQITPWNLSSNFV-ACTNQDRENIERLEITGVGDPSG-RGLGFSYV----RAAPKA 985
IE L +TPWNL+ TN+ + ++G GDPSG RG G S + R
Sbjct: 1927 IEELLLLTPWNLTKECKDVLTNK---GSAQFMLSGFGDPSGGRGEGISLIKRLNRERAGL 1983
Query: 986 SVSSAMVKKKAAANRGGSTVTGTDA-----------------------DLRRLSMEAARE 1022
S S + + G ++ G DLR+LSM+ R
Sbjct: 1984 SFLSGASRNFGFSRDGARSLAGAFGPGGIFLGAHLGAAAGGGVAGTGEDLRKLSMQELRR 2043
Query: 1023 VLLKFNVPEEMIAKQTRWHRIAMIRK 1048
L+++ + E +I RW ++A++R+
Sbjct: 2044 RLVQYGLSESVIRTLPRWDQVALVRQ 2069
>gi|237844653|ref|XP_002371624.1| bromodomain-containing protein [Toxoplasma gondii ME49]
gi|211969288|gb|EEB04484.1| bromodomain-containing protein [Toxoplasma gondii ME49]
Length = 2648
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 132/351 (37%), Gaps = 97/351 (27%)
Query: 638 AQKLPGENKSLRPPG-----------AFKKKSDLSVKD-GHVFLMEYCEERPLLLSNAGM 685
A++ PG +LR G F DLS++D + ++EY E++PLL+ N GM
Sbjct: 1496 AERGPGTTGALRLDGEGSGETIHLANLFYTPQDLSLRDDAPIAVLEYMEQQPLLMHNPGM 1555
Query: 686 GANLCTYY----QKSSPGDQAGALLCSGNNCLGNV-----LTLEPGD-KSPFLGD---IK 732
+ ++ +S +A L+ + G + L L+ D K G +
Sbjct: 1556 AIRIVRHFVPHNAPNSELSRADQLVHAERQVKGRLGPFGELQLQQDDAKLTLFGTRLPLA 1615
Query: 733 AGCSQSSLETNMYRAPVFTHKVAT---------------TDFLLVR-------------- 763
G Q+ E+ + +APV+ H A TDF+LVR
Sbjct: 1616 RGQGQAVAESPLLKAPVYVHPTAPNAPVKRDSRFHDYRDTDFILVRTRAKDRCKVYLRPL 1675
Query: 764 --------SAKGKISIRRID---------------KVAVVAQQEPLMEVMSPGSKNLQTY 800
SA+ S R V V Q EP MEV +P SK +
Sbjct: 1676 LYPPPEKNSAREGFSFYRSGGSLESLSVLGSPANCGVYTVGQCEPRMEVHAPNSKK---H 1732
Query: 801 SINRMLVNVYREFSAAAKRGLLPCIGVDELSVQ--FPNLSEAIIRKKLKECAFLRRDGNG 858
+R L AA++ + V +L Q P + E + + LK
Sbjct: 1733 VEDRKLHAKAWALRFAAEKNVTDMKRVKDLVKQRFCPPVVEKEVTQMLK----------- 1781
Query: 859 KQVWSMKRTFHIPSEGD--LRKLAYPEHVCSYESMQAGLYRLKHLGITQLT 907
+ S +P D LR + PE +C E+ A L+RLK +GI LT
Sbjct: 1782 --LLSPIAPHRLPRLDDAALRSIIRPELICCLEAAHAALFRLKAIGIMTLT 1830
Score = 45.4 bits (106), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 62/146 (42%), Gaps = 32/146 (21%)
Query: 932 IERELQITPWNLSSNFV-ACTNQDRENIERLEITGVGDPSG-RGLGFSYV----RAAPKA 985
IE L +TPWNL+ TN+ + ++G GDPSG RG G S + R
Sbjct: 1927 IEELLLLTPWNLTKECKDVLTNK---GSAQFMLSGFGDPSGGRGEGISLIKRLNRERAGL 1983
Query: 986 SVSSAMVKKKAAANRGGSTVTGTDA-----------------------DLRRLSMEAARE 1022
S S + + G ++ G DLR+LSM+ R
Sbjct: 1984 SFLSGASRNFGFSRDGARSLAGAFGPGGIFLGAHLGAAAGGGVAGTGEDLRKLSMQELRR 2043
Query: 1023 VLLKFNVPEEMIAKQTRWHRIAMIRK 1048
L+++ + E +I RW ++A++R+
Sbjct: 2044 RLVQYGLSESVIRTLPRWDQVALVRQ 2069
>gi|221482975|gb|EEE21299.1| bromodomain-containing protein, putative [Toxoplasma gondii GT1]
Length = 2648
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 132/351 (37%), Gaps = 97/351 (27%)
Query: 638 AQKLPGENKSLRPPG-----------AFKKKSDLSVKD-GHVFLMEYCEERPLLLSNAGM 685
A++ PG +LR G F DLS++D + ++EY E++PLL+ N GM
Sbjct: 1496 AERGPGTTGALRLDGEGSGETIHLANLFYTPQDLSLRDDAPIAVLEYMEQQPLLMHNPGM 1555
Query: 686 GANLCTYY----QKSSPGDQAGALLCSGNNCLGNV-----LTLEPGD-KSPFLGD---IK 732
+ ++ +S +A L+ + G + L L+ D K G +
Sbjct: 1556 AIRIVRHFVPHNAPNSELSRADQLVHAERQVKGRLGPFGELQLQQDDAKLTLFGTRLPLA 1615
Query: 733 AGCSQSSLETNMYRAPVFTHKVAT---------------TDFLLVR-------------- 763
G Q+ E+ + +APV+ H A TDF+LVR
Sbjct: 1616 RGQGQAVAESPLLKAPVYVHPTAPNAPVKRDSRFHDYRDTDFILVRTRAKDRCKVYLRPL 1675
Query: 764 --------SAKGKISIRRID---------------KVAVVAQQEPLMEVMSPGSKNLQTY 800
SA+ S R V V Q EP MEV +P SK +
Sbjct: 1676 LYPPPEKNSAREGFSFYRSGGSLESLSVLGSPANCGVYTVGQCEPRMEVHAPNSKK---H 1732
Query: 801 SINRMLVNVYREFSAAAKRGLLPCIGVDELSVQ--FPNLSEAIIRKKLKECAFLRRDGNG 858
+R L AA++ + V +L Q P + E + + LK
Sbjct: 1733 VEDRKLHAKAWALRFAAEKNVTDMKRVKDLVKQRFCPPVVEKEVTQMLK----------- 1781
Query: 859 KQVWSMKRTFHIPSEGD--LRKLAYPEHVCSYESMQAGLYRLKHLGITQLT 907
+ S +P D LR + PE +C E+ A L+RLK +GI LT
Sbjct: 1782 --LLSPIAPHRLPRLDDAALRSIIRPELICCLEAAHAALFRLKAIGIMTLT 1830
Score = 45.4 bits (106), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 62/146 (42%), Gaps = 32/146 (21%)
Query: 932 IERELQITPWNLSSNFV-ACTNQDRENIERLEITGVGDPSG-RGLGFSYV----RAAPKA 985
IE L +TPWNL+ TN+ + ++G GDPSG RG G S + R
Sbjct: 1927 IEELLLLTPWNLTKECKDVLTNK---GSAQFMLSGFGDPSGGRGEGISLIKRLNRERAGL 1983
Query: 986 SVSSAMVKKKAAANRGGSTVTGTDA-----------------------DLRRLSMEAARE 1022
S S + + G ++ G DLR+LSM+ R
Sbjct: 1984 SFLSGASRNFGFSRDGARSLAGAFGPGGIFLGAHLGAAAGGGVAGTGEDLRKLSMQELRR 2043
Query: 1023 VLLKFNVPEEMIAKQTRWHRIAMIRK 1048
L+++ + E +I RW ++A++R+
Sbjct: 2044 RLVQYGLSESVIRTLPRWDQVALVRQ 2069
>gi|68492249|ref|XP_710100.1| hypothetical protein CaO19.8354 [Candida albicans SC5314]
gi|68492272|ref|XP_710090.1| hypothetical protein CaO19.735 [Candida albicans SC5314]
gi|46431210|gb|EAK90818.1| hypothetical protein CaO19.735 [Candida albicans SC5314]
gi|46431223|gb|EAK90828.1| hypothetical protein CaO19.8354 [Candida albicans SC5314]
Length = 488
Score = 50.4 bits (119), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 35/55 (63%), Gaps = 4/55 (7%)
Query: 930 SHIERELQITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPK 984
+ I+ E ++ PWNLS NFV NQ + L++ G GDP+G GLGFS +RA K
Sbjct: 136 TEIDVEEELAPWNLSRNFV-IANQTKT---MLQLNGEGDPTGIGLGFSMLRATQK 186
>gi|238878854|gb|EEQ42492.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 490
Score = 50.4 bits (119), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 35/55 (63%), Gaps = 4/55 (7%)
Query: 930 SHIERELQITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRAAPK 984
+ I+ E ++ PWNLS NFV NQ + L++ G GDP+G GLGFS +RA K
Sbjct: 140 TEIDVEEELAPWNLSRNFV-IANQTKT---MLQLNGEGDPTGIGLGFSMLRATQK 190
>gi|123424165|ref|XP_001306523.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121888102|gb|EAX93593.1| hypothetical protein TVAG_407780 [Trichomonas vaginalis G3]
Length = 123
Score = 49.7 bits (117), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 47/89 (52%), Gaps = 7/89 (7%)
Query: 867 TFHIPSEGDLRKL-----AYPEHVCSYESMQAGLYRLKHLGITQLTLPASISSAMSQLPD 921
+F +P + DL +L YPE VCSY+SM AGL +L+ G+ L +I + L
Sbjct: 23 SFWVP-KPDLDRLFSGLYIYPEDVCSYQSMLAGLKKLRRNGVHFLVKSKNIYRHIQSLEG 81
Query: 922 EAIALAAASHIERELQITPWNLSSNFVAC 950
+ + A IE EL TPW+ + NF +
Sbjct: 82 D-LTKQIAERIELELLRTPWSRTENFASV 109
>gi|387219751|gb|AFJ69584.1| transcription initiation factor TFIID subunit 1, partial
[Nannochloropsis gaditana CCMP526]
Length = 358
Score = 47.0 bits (110), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 81/187 (43%), Gaps = 51/187 (27%)
Query: 840 AIIRKKLKECAFLRRDGNGKQVWSMKRTFHIPSEGDLRKLAYPEHVCSYESMQAGLYRLK 899
++ +LK+ A + + + WS+ + E LR+++ PE VC +ESM +G+ RL
Sbjct: 75 VLVLNQLKQVAHELQGKHTENHWSLNND--VVVEDVLREIS-PEEVCIFESMCSGVRRLL 131
Query: 900 HLGITQLT-----LPASISSAMSQ-----------------------------LPDEAIA 925
GI+ + PA I +++ L E +A
Sbjct: 132 SEGISIVGRVTSFAPARIEPILARNLQCLLQDRQARAEKARRSAELLKGGERGLEAEEVA 191
Query: 926 -------------LAAASHIERELQITPWNLSSNFVACTNQDRENIERLEITGVGDPSGR 972
+A +++ EL + PW+L+ + A TN+ ++TG+GDPSG
Sbjct: 192 NMLQVLYEEVRQLIAVGAYLLDELYLAPWSLTHFYHAITNEKAYG-GIFKLTGLGDPSGI 250
Query: 973 GLGFSYV 979
G GFS++
Sbjct: 251 GEGFSFL 257
>gi|322709372|gb|EFZ00948.1| guanine deaminase [Metarhizium anisopliae ARSEF 23]
Length = 478
Score = 43.9 bits (102), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 60/128 (46%), Gaps = 9/128 (7%)
Query: 1017 MEAAREVLL-----KFNVPEEMIAKQTRWHRIAMIRKLSSEQAASGVQLQQQTRG-KCQE 1070
+EAAR+ +L P+E K+ +A + L++ A V L+ + G + +
Sbjct: 353 LEAARQAVLVSRHLAMKAPDEETRKKVNL-SVAQVLYLATRGGAKVVGLEDKVGGFEVGK 411
Query: 1071 IWDRQVQSLSAADDDEIGSDSEHSDLDSFAGDLENLLDAEEFEEEESNYDTKHDKVEGVK 1130
WD Q+ L D + G +H ++D F DL N D + N D ++ K+ VK
Sbjct: 412 DWDAQLVGLHIVGDHKEGHHKDHGNVDLFEWDLCNWKDI--VAKWMYNGDDRNTKIVWVK 469
Query: 1131 GLKMRRRP 1138
G ++ RRP
Sbjct: 470 GRQVHRRP 477
>gi|149189087|ref|ZP_01867375.1| hypothetical protein VSAK1_08316 [Vibrio shilonii AK1]
gi|148837050|gb|EDL53999.1| hypothetical protein VSAK1_08316 [Vibrio shilonii AK1]
Length = 1254
Score = 42.7 bits (99), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 84/205 (40%), Gaps = 38/205 (18%)
Query: 424 ALMRGIELDTGQNNFHE-----RSTSPNEKDCIVNMQNSPVLSETF---GSKSSSDNTSH 475
L++ + G N FHE R T + CI +P+L G+ SS ++
Sbjct: 409 TLLKLLNPIVGANKFHEIRFQTRFTQKGQIKCI-----APLLIRIVKKDGTHSSVRFNTY 463
Query: 476 LFTESRYHPQLLRLESQLDLDNHSHANGIKENVSIKLCQSDAVKRFSKHSLQNRDMMEGS 535
+ Y + L ES L SH + E + F +H +++ +MM
Sbjct: 464 S-APNLYMKKGLLAESLLAASKQSHIAPLPEKKVLHWLS------FIEHFIEHYEMMSKQ 516
Query: 536 WLDNIIWEPVDAVGKPKLILDLQDEQMLFEILDNKDDEHPLLHAGAMIITRSAKPSDFKP 595
+ P+ G+ K+++ L+ + L E+ N D E +DFK
Sbjct: 517 GAVTFLNSPLSKSGRQKVMIGLKSIENLIELRQNCDHE-----------------ADFKS 559
Query: 596 AESVKLFYLGKELEDHKSLADQNVR 620
+S+ L Y G+ + D ++LAD N+R
Sbjct: 560 VQSL-LSYCGQVISDGRALADLNIR 583
>gi|68534567|gb|AAH98877.1| Taf1 protein [Danio rerio]
Length = 583
Score = 40.8 bits (94), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 13/85 (15%)
Query: 491 SQLDLDNHSHANGIKENVSIKLCQSDAVKRFSKHSLQNRDMMEGSWLDNIIW--EPVDAV 548
S+ D NH H ++ D FS + N +++ G W DNIIW + +D +
Sbjct: 497 SKRDKHNHDH----------QVSHEDDTPWFSIFPIDNEELVYGRWEDNIIWDDQNMDCI 546
Query: 549 GKPK-LILDLQDEQMLFEILDNKDD 572
P L L+ DE ++ EI D K++
Sbjct: 547 PSPPVLTLNPNDENIILEIPDEKEE 571
>gi|120537704|gb|AAI29303.1| Taf1 protein [Danio rerio]
Length = 583
Score = 40.8 bits (94), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 13/85 (15%)
Query: 491 SQLDLDNHSHANGIKENVSIKLCQSDAVKRFSKHSLQNRDMMEGSWLDNIIW--EPVDAV 548
S+ D NH H ++ D FS + N +++ G W DNIIW + +D +
Sbjct: 497 SKRDKHNHDH----------QVSHEDDTPWFSIFPIDNEELVYGRWEDNIIWDDQNMDCI 546
Query: 549 GKPK-LILDLQDEQMLFEILDNKDD 572
P L L+ DE ++ EI D K++
Sbjct: 547 PSPPVLTLNPNDENIILEIPDEKEE 571
>gi|111306357|gb|AAI21755.1| Taf1 protein [Danio rerio]
Length = 583
Score = 40.8 bits (94), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 13/85 (15%)
Query: 491 SQLDLDNHSHANGIKENVSIKLCQSDAVKRFSKHSLQNRDMMEGSWLDNIIW--EPVDAV 548
S+ D NH H ++ D FS + N +++ G W DNIIW + +D +
Sbjct: 497 SKRDKHNHDH----------QVSHEDDTPWFSIFPIDNEELVYGRWEDNIIWDDQNMDCI 546
Query: 549 GKPK-LILDLQDEQMLFEILDNKDD 572
P L L+ DE ++ EI D K++
Sbjct: 547 PSPPVLTLNPNDENIILEIPDEKEE 571
>gi|66911879|gb|AAH96981.1| Taf1 protein [Danio rerio]
Length = 583
Score = 40.8 bits (94), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 13/85 (15%)
Query: 491 SQLDLDNHSHANGIKENVSIKLCQSDAVKRFSKHSLQNRDMMEGSWLDNIIW--EPVDAV 548
S+ D NH H ++ D FS + N +++ G W DNIIW + +D +
Sbjct: 497 SKRDKHNHDH----------QVSHEDDTPWFSIFPIDNEELVYGRWEDNIIWDDQNMDCI 546
Query: 549 GKPK-LILDLQDEQMLFEILDNKDD 572
P L L+ DE ++ EI D K++
Sbjct: 547 PSPPVLTLNPNDENIILEIPDEKEE 571
>gi|50418476|gb|AAH77097.1| Taf1 protein [Danio rerio]
Length = 587
Score = 40.8 bits (94), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 13/85 (15%)
Query: 491 SQLDLDNHSHANGIKENVSIKLCQSDAVKRFSKHSLQNRDMMEGSWLDNIIW--EPVDAV 548
S+ D NH H ++ D FS + N +++ G W DNIIW + +D +
Sbjct: 497 SKRDKHNHDH----------QVSHEDDTPWFSIFPIDNEELVYGRWEDNIIWDDQNMDCI 546
Query: 549 GKPK-LILDLQDEQMLFEILDNKDD 572
P L L+ DE ++ EI D K++
Sbjct: 547 PSPPVLTLNPNDENIILEIPDEKEE 571
>gi|63100544|gb|AAH95076.1| Taf1 protein [Danio rerio]
Length = 583
Score = 40.8 bits (94), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 13/85 (15%)
Query: 491 SQLDLDNHSHANGIKENVSIKLCQSDAVKRFSKHSLQNRDMMEGSWLDNIIW--EPVDAV 548
S+ D NH H ++ D FS + N +++ G W DNIIW + +D +
Sbjct: 497 SKRDKHNHDH----------QVSHEDDTPWFSIFPIDNEELVYGRWEDNIIWDDQNMDCI 546
Query: 549 GKPK-LILDLQDEQMLFEILDNKDD 572
P L L+ DE ++ EI D K++
Sbjct: 547 PSPPVLTLNPNDENIILEIPDEKEE 571
>gi|94574321|gb|AAI16525.1| Taf1 protein [Danio rerio]
Length = 583
Score = 40.0 bits (92), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 505 KENVSIKLCQSDAVKRFSKHSLQNRDMMEGSWLDNIIW--EPVDAVGKPK-LILDLQDEQ 561
K N ++ D FS + N +++ G W DNIIW + +D + P L L+ DE
Sbjct: 501 KHNHDRQVSHEDDTPWFSIFPIDNEELVYGRWEDNIIWDDQNMDCIPSPPVLTLNPNDEN 560
Query: 562 MLFEILDNKDD 572
++ EI D K++
Sbjct: 561 IILEIPDEKEE 571
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.312 0.131 0.373
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,674,929,356
Number of Sequences: 23463169
Number of extensions: 922661330
Number of successful extensions: 2752062
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 416
Number of HSP's successfully gapped in prelim test: 2048
Number of HSP's that attempted gapping in prelim test: 2717419
Number of HSP's gapped (non-prelim): 27128
length of query: 1282
length of database: 8,064,228,071
effective HSP length: 155
effective length of query: 1127
effective length of database: 8,722,404,172
effective search space: 9830149501844
effective search space used: 9830149501844
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 83 (36.6 bits)