Query 000793
Match_columns 1282
No_of_seqs 267 out of 1285
Neff 5.2
Searched_HMMs 29240
Date Tue Mar 26 16:54:44 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/000793.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_563-566//hhsearch_pdb/000793hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ols_A Phosphoenolpyruvate syn 1.0 1 1 436.5 26.4 291 964-1281 2-336 (794)
2 1vbg_A Pyruvate,orthophosphate 1.0 1 1 362.0 13.9 244 965-1281 3-342 (876)
3 1kbl_A PPDK, pyruvate phosphat 1.0 1 1 355.5 10.0 242 966-1281 2-338 (873)
4 1h6z_A Pyruvate phosphate diki 1.0 1 1 348.8 10.2 267 964-1281 3-367 (913)
5 2x0s_A Pyruvate phosphate diki 1.0 1 1 332.4 8.5 267 965-1281 4-367 (913)
6 2ols_A Phosphoenolpyruvate syn 1.0 1 1 49.0 2.4 100 829-936 362-467 (794)
7 2e28_A Pyruvate kinase, PK; al 1.0 1 1 47.6 4.9 98 831-934 482-581 (587)
8 1vbg_A Pyruvate,orthophosphate 1.0 1 1 47.5 3.8 104 828-936 396-512 (876)
9 1kbl_A PPDK, pyruvate phosphat 1.0 1 1 47.3 3.3 105 827-936 391-508 (873)
10 3t05_A Pyruvate kinase, PK; te 1.0 1 1 46.9 8.9 97 831-934 501-599 (606)
No 1
>2ols_A Phosphoenolpyruvate synthase; MC structural genomics, PSI-2, protein structure initiative, M center for structural genomics, transferase; 2.40A {Neisseria meningitidis}
Probab=1.00 E-value=1 Score=436.48 Aligned_cols=291 Identities=24% Similarity=0.363 Sum_probs=239.1
Q ss_pred CCCEEEECCCCCC---CCCCHHHHHHHHHHHHCC-CCCCCCCCEEECHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHH
Q ss_conf 6760364799798---754654197998443189-964589950419789999998115304999999998430899947
Q 000793 964 RGKYAVSVEDFTP---DMVGAKSCNIKFLRERVP-SWIKIPTSVAIPFGAFETVLSENINKDIANKISRLYKFINGGDLS 1039 (1282)
Q Consensus 964 ~~~~vi~l~e~~~---~~vGgKAAnLa~L~~~lp-~g~~VP~GfvIPfgafe~fL~~~~n~~L~~~I~~l~a~l~~~d~~ 1039 (1282)
+++|++++.+.+. ..+|+|++||++|.+.++ .|++||+||+||+++|++|++.+ ++++.|...++.++..+..
T Consensus 2 ~~~~v~~~~~~~~~~~~~vGGK~anL~em~~~L~~~GlpVP~GF~Itt~a~~~fl~~~---~l~~~i~~~l~~l~~~~~~ 78 (794)
T 2ols_A 2 ADNYVIWFENLRMTDVERVGGKNASLGEMISQLTEKGVRVPGGFATTAEAYRAFLAHN---GLSERISAALAKLDVEDVA 78 (794)
T ss_dssp --CCEEEGGGCCGGGHHHHHHHHHHHHHHHHHHGGGTCCCCCEEEECHHHHHHHHTGG---GHHHHHHHHHHSCCTTSHH
T ss_pred CCCEEEECCCCCHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHC---CHHHHHHHHHHHHCCCCHH
T ss_conf 9877987776880211138788998999998776479989998998799999999838---8489999998760556789
Q ss_pred HH----HHHHHHHHCCCCCHHHHHHHHHHHH----------------HCC-------CCCCCCC-------CHHHHHHHH
Q ss_conf 89----9999999928999999999999988----------------019-------9999972-------299999999
Q 000793 1040 KL----QEIQEAVLQMSAPLSLIYELKNKMR----------------SSG-------MPWPGDE-------GWNLAWRSI 1085 (1282)
Q Consensus 1040 ~L----~~IR~~I~~~~lP~eL~~eL~~a~R----------------SSg-------~s~aG~~-------g~e~l~~AI 1085 (1282)
.| .++|++|+++++|+++.++|..+++ ||. .+|||++ |.++++.||
T Consensus 79 ~l~~~~~~ir~~I~~~~~p~~l~~~i~~a~~~l~~~~g~~~~~vaVRSSa~~EDl~~~sfAG~~~t~l~v~g~~~l~~Ai 158 (794)
T 2ols_A 79 ELARVGKEIRQWILDTPFPEQLDAEIEAAWNKMVADAGGADISVAVRSSATAEDLPDASFAGQQETFLNINGLDNVKEAM 158 (794)
T ss_dssp HHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTSSCCCCEEEEEEECC-------CCSCSCEEEEECSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
T ss_conf 99999999999998489998999999999998742446567428981578733546654444566631689999999999
Q ss_pred HHHHHCCCCHHHHHHHHHCCCCCCCCCEEEEEEEEECCC--EEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCC
Q ss_conf 999816998589999998199997762077998510675--329999369998998651221334666510134578771
Q 000793 1086 KKVWASKWNERAFISCRKANLNHDNLCMAVLIQETICGD--YAFVIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAM 1163 (1282)
Q Consensus 1086 K~VWASlys~RAi~yRr~~GI~~~~v~MAVLVQemV~ad--~SGVlfT~nP~tgd~~~i~IEav~GLGEsLVsG~~Gtp~ 1163 (1282)
|+||||+||+||+.||+.+|++++++.|||+||+||+++ .|||+||+||.+|+++.++|+++|||||+||+|.+ +|+
T Consensus 159 k~v~aS~~s~RAi~YR~~~gi~~~~~~mAV~VQ~MV~~~~s~sGV~FT~dP~tG~~~~~~I~a~~GlGE~vV~G~~-tpd 237 (794)
T 2ols_A 159 HHVFASLYNDRAISYRVHKGFEHDIVALSAGVQRMVRSDSGASGVMFTLDTESGYDQVVFVTSSYGLGENVVQGAV-NPD 237 (794)
T ss_dssp HHHHHHTTCHHHHHHHHHHCC--CCCCEEEEEEECCCTTSSEEEEEESSCTTTCCCSEEEEEEEESCTHHHHHTSS-CCE
T ss_pred HHHHHHCCCHHHHHHHHHCCCCHHHHCCEEEEEECCCCCCEEEEEEEECCCCCCCCCEEEEEECCCCCCEEECCCC-CCC
T ss_conf 9999861788899999975999177484699998116875258999967998898766999953689842211775-770
Q ss_pred EEEEECCCCC--CCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf 5999057898--98301456531245688607851599975200014897022241697421012358998879611014
Q 000793 1164 SFVTKKNNLK--SPIVTCYPSKLIGLYGKPSIIFRSDSNGEDLEKYAGAGLYDSVIMNDPEKVVLDYSRDPMVGDKSFQT 1241 (1282)
Q Consensus 1164 ~f~v~K~~~~--~~~vl~~~sK~i~~~~~~~~i~rsdsnGedLe~~agaGl~~svp~~~~~~~~vdys~~plLtD~e~r~ 1241 (1282)
.|.++|.++. ...+ ..+.++.+ ...+++.. +++ .+|.+..++++... .+.++|+|++
T Consensus 238 ~~~v~kp~l~~~~~~i---~~~~~~~k-~~~~~~~~--~~~------~g~~~~~~~~p~~~------~~~~~L~d~~--- 296 (794)
T 2ols_A 238 EFYVFKPTLKAGKPAI---LRKTMGSK-HIKMIFTD--KAE------AGKSVTNVDVPEED------RNRFSITDEE--- 296 (794)
T ss_dssp EEEEEHHHHHTTSCCE---EEEECCCC-CEEEEECS--CCS------SSTTEEEEECCHHH------HTSCSSCHHH---
T ss_pred EEEEECCCCCCCCCCE---EEEECCCC-CEEEEECC--CCC------CCCEEEEEECCHHH------HCCCCCCHHH---
T ss_conf 8998434334677630---36522665-14687335--666------79704998689899------4587789999---
Q ss_pred HHHHHHHHHHHHHHHHCCCCEEEEEEEECC--EEEEEEECCC
Q ss_conf 999999999999998609973599999899--6999962158
Q 000793 1242 SVFSKIAETGKIIESLYGYPQDIEGVLKDG--LIYVVQARPQ 1281 (1282)
Q Consensus 1242 ~~l~~La~ia~~IE~~fG~PQDIEwai~~g--kLyILQsRPq 1281 (1282)
+.+|++++..||++||.||||||+++++ +|||||+||+
T Consensus 297 --~~~L~~~~~~lE~~yg~pqDIEwai~~~~g~L~iLQaRP~ 336 (794)
T 2ols_A 297 --ITELAHYALTIEKHYGRPMDIEWGRDGLDGKLYILQARPE 336 (794)
T ss_dssp --HHHHHHHHHHHHHHHTSCEEEEEEECTTTCCEEEEEEEEC
T ss_pred --HHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEEEEEECCC
T ss_conf --9999999999998729976899999889885999984376
No 2
>1vbg_A Pyruvate,orthophosphate dikinase; transferase, maize, riken structural genomics/proteomics INI RSGI, structural genomics; 2.30A {Zea mays} SCOP: c.1.12.2 c.8.1.1 d.142.1.5 PDB: 1vbh_A*
Probab=1.00 E-value=1 Score=361.97 Aligned_cols=244 Identities=17% Similarity=0.195 Sum_probs=189.9
Q ss_pred CCEEEEC----CCC---CCCCCCHHHHHHHHHHHHCCCCCCCCCCEEECHHHHHHHHHHC--CCHHHHHHHHHHHHHHC-
Q ss_conf 7603647----997---9875465419799844318996458995041978999999811--53049999999984308-
Q 000793 965 GKYAVSV----EDF---TPDMVGAKSCNIKFLRERVPSWIKIPTSVAIPFGAFETVLSEN--INKDIANKISRLYKFIN- 1034 (1282)
Q Consensus 965 ~~~vi~l----~e~---~~~~vGgKAAnLa~L~~~lp~g~~VP~GfvIPfgafe~fL~~~--~n~~L~~~I~~l~a~l~- 1034 (1282)
.+|++++ .+. +..++|||++||++|.+ .|++||+||+||+++|++|++.+ ...++++.|...++.++
T Consensus 3 ~~~v~~f~~~~~~~~~~~~~~vGGKganL~em~~---~glpVP~GF~Itt~a~~~~~~~~~~~~~~l~~~i~~~l~~le~ 79 (876)
T 1vbg_A 3 KKRVFHFGKGKSEGNKTMKELLGGKGANLAEMAS---IGLSVPPGFTVSTEACQQYQDAGCALPAGLWAEIVDGLQWVEE 79 (876)
T ss_dssp CCSEEEEETTEESSCTTCTTTTHHHHHHHHHHHH---TTCCCCCEEEECHHHHHHHHHTTSCCCTTHHHHHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHH---CCCCCCCEEEECHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
T ss_conf 8689988766655672230018589999999997---8999999389779999999986100518899999999999987
Q ss_pred -----CCCHH-------------HHHHHHHHHHCCCCCHHHHHHHHHH---------HH---------------------
Q ss_conf -----99947-------------8999999999289999999999999---------88---------------------
Q 000793 1035 -----GGDLS-------------KLQEIQEAVLQMSAPLSLIYELKNK---------MR--------------------- 1066 (1282)
Q Consensus 1035 -----~~d~~-------------~L~~IR~~I~~~~lP~eL~~eL~~a---------~R--------------------- 1066 (1282)
.++.. .+..++++|+++.+|++++++|..+ ||
T Consensus 80 ~~~~~~gd~~~plllsvrs~a~~smpgm~~tIln~~lpd~~~~~l~~~~~~~fA~d~yrr~~q~~~~~~~~vr~~~f~~~ 159 (876)
T 1vbg_A 80 YMGATLGDPQRPLLLSVRSGAAVSMPGMMDTVLNLGLNDEVAAGLAAKSGERFAYDSFRRFLDMFGNVVMDIPRSLFEEK 159 (876)
T ss_dssp HHTCBTTCSSSBCCEEEECCCSSCCTTCCCCEEEETCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHTSCCCHHHHHHH
T ss_pred HHCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEECCHHHHHHH
T ss_conf 63513488766430000005654650689999817999999999997535215899999998631661350472657999
Q ss_pred -------------HCC---------CCCCCCC-----------CHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCE
Q ss_conf -------------019---------9999972-----------2999999999998169985899999981999977620
Q 000793 1067 -------------SSG---------MPWPGDE-----------GWNLAWRSIKKVWASKWNERAFISCRKANLNHDNLCM 1113 (1282)
Q Consensus 1067 -------------SSg---------~s~aG~~-----------g~e~l~~AIK~VWASlys~RAi~yRr~~GI~~~~v~M 1113 (1282)
||. .+|+|.| .+++++.||+.||||+||+||+.||+.+|++++ .+|
T Consensus 160 ~~~~~~~~~v~~~ss~taEDl~~~~~sf~~~y~~~~g~~fp~d~~~qL~~Ai~~v~aS~~~~RAi~YR~~~gi~~~-~~~ 238 (876)
T 1vbg_A 160 LEHMKESKGLKNDTDLTASDLKELVGQYKEVYLSAKGEPFPSDPKKQLELAVLAVFNSWESPRAKKYRSINQITGL-RGT 238 (876)
T ss_dssp HHHHHHHHTCSSGGGCCHHHHHHHHHHHHHHHHHHHSSCCCCCHHHHHHHHHHHHHHHTTCHHHHHHHHTTTCCCC-CCC
T ss_pred HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCH-HCC
T ss_conf 9998775184446668877899999999999988619999877599999999999955598789999996499800-075
Q ss_pred EEEEEEEECCC-----EEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 77998510675-----3299993699989986512213346665101345787715999057898983014565312456
Q 000793 1114 AVLIQETICGD-----YAFVIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAMSFVTKKNNLKSPIVTCYPSKLIGLY 1188 (1282)
Q Consensus 1114 AVLVQemV~ad-----~SGVlfT~nP~tgd~~~i~IEav~GLGEsLVsG~~Gtp~~f~v~K~~~~~~~vl~~~sK~i~~~ 1188 (1282)
||+||+||.++ .|||+||+||.||+++.+-.-.+.|+||.||+|.+ +|+.|.+ +
T Consensus 239 AV~VQ~MV~g~~g~~s~sGV~FT~nP~tG~~~~~g~~li~a~GE~VVsG~~-tPd~~~~----------l---------- 297 (876)
T 1vbg_A 239 AVNVQCMVFGNMGNTSGTGVLFTRNPNTGEKKLYGEFLVNAQGEDVVAGIR-TPEDLDA----------M---------- 297 (876)
T ss_dssp CEEEEECCCSCSSTTCEEEEEESSCTTTCCSSCEEEEEESSCHHHHHHTSC-CCEETHH----------H----------
T ss_pred EEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCEEEEEECCCHHHHCCCC-CCCHHHH----------H----------
T ss_conf 589998025788997057999837899998663338998467356535885-8622555----------2----------
Q ss_pred CCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEE
Q ss_conf 88607851599975200014897022241697421012358998879611014999999999999998609973599999
Q 000793 1189 GKPSIIFRSDSNGEDLEKYAGAGLYDSVIMNDPEKVVLDYSRDPMVGDKSFQTSVFSKIAETGKIIESLYGYPQDIEGVL 1268 (1282)
Q Consensus 1189 ~~~~~i~rsdsnGedLe~~agaGl~~svp~~~~~~~~vdys~~plLtD~e~r~~~l~~La~ia~~IE~~fG~PQDIEwai 1268 (1282)
+ + ..++. +.+|++++..||++||.||||||++
T Consensus 298 ----------------~----------------~-----------~~p~~-----~~~L~~~~~~lE~hy~~pqDIEfti 329 (876)
T 1vbg_A 298 ----------------K----------------N-----------LMPQA-----YDELVENCNILESHYKEMQDIEFTV 329 (876)
T ss_dssp ----------------H----------------H-----------HCHHH-----HHHHHHHHHHHHHHHCSCEEEEEEE
T ss_pred ----------------C----------------C-----------CCHHH-----HHHHHHHHHHHHHHCCCCEEEEEEE
T ss_conf ----------------0----------------2-----------68899-----9999999999999749975889999
Q ss_pred ECCEEEEEEECCC
Q ss_conf 8996999962158
Q 000793 1269 KDGLIYVVQARPQ 1281 (1282)
Q Consensus 1269 ~~gkLyILQsRPq 1281 (1282)
++|+|||||+||+
T Consensus 330 ~~g~L~iLQ~Rp~ 342 (876)
T 1vbg_A 330 QENRLWMLQCRTG 342 (876)
T ss_dssp ETTEEEEEEEEEC
T ss_pred ECCEEEEEEECCC
T ss_conf 8997999983023
No 3
>1kbl_A PPDK, pyruvate phosphate dikinase; transferase, phosphotransferase; 1.94A {Clostridium symbiosum} SCOP: c.1.12.2 c.8.1.1 d.142.1.5 PDB: 1kc7_A* 1dik_A 1ggo_A 1jde_A 2dik_A 2r82_A 2fm4_A
Probab=1.00 E-value=1 Score=355.49 Aligned_cols=242 Identities=20% Similarity=0.319 Sum_probs=187.3
Q ss_pred CEEEECCCCCC---CCCCHHHHHHHHHHHHCCCCCCCCCCEEECHHHHHHHHHHC--CCHHHHHHHHHHHHHHCC-----
Q ss_conf 60364799798---75465419799844318996458995041978999999811--530499999999843089-----
Q 000793 966 KYAVSVEDFTP---DMVGAKSCNIKFLRERVPSWIKIPTSVAIPFGAFETVLSEN--INKDIANKISRLYKFING----- 1035 (1282)
Q Consensus 966 ~~vi~l~e~~~---~~vGgKAAnLa~L~~~lp~g~~VP~GfvIPfgafe~fL~~~--~n~~L~~~I~~l~a~l~~----- 1035 (1282)
+|++++.+.+. ..+|||++||++|.+ .+++||+||+||+++|++|++.+ ...+++++|...++.++.
T Consensus 2 ~~v~~f~~~~~~~~~~vGGKganL~em~~---~glpVP~GF~ITt~a~~~~~~~~~~~p~~l~~~i~~~l~~le~~~~~~ 78 (873)
T 1kbl_A 2 KWVYKFEEGNASMRNLLGGKGCNLAEMTI---LGMPIPQGFTVTTEACTEYYNSGKQITQEIQDQIFEAITWLEELNGKK 78 (873)
T ss_dssp CCEEEGGGCCGGGHHHHHHHHHHHHHHHH---TTCCCCCEEEECHHHHHHHHTTSSCCCHHHHHHHHHHHHHHHHHHTSC
T ss_pred CEEEECCCCCHHHHHHCCHHHHHHHHHHH---CCCCCCCEEEECHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCC
T ss_conf 84897767881103337199999999996---879999979985999999998552364889999999999999873502
Q ss_pred -CC---H----------HHHHHHHHHHHCCCCCHHHHHHHHH----------HHH-------------------------
Q ss_conf -99---4----------7899999999928999999999999----------988-------------------------
Q 000793 1036 -GD---L----------SKLQEIQEAVLQMSAPLSLIYELKN----------KMR------------------------- 1066 (1282)
Q Consensus 1036 -~d---~----------~~L~~IR~~I~~~~lP~eL~~eL~~----------a~R------------------------- 1066 (1282)
++ + ..+..+++.|+++.+|++++++|.. +||
T Consensus 79 fg~~~~pl~lsvRS~a~~SmpGm~dtiLn~~l~d~~~~~l~~~~g~~~fa~d~yrr~~~~~~~v~~~v~~~~f~~~~~~~ 158 (873)
T 1kbl_A 79 FGDTEDPLLVSVRSGARASMPGMMDTILNLGLNDVAVEGFAKKTGNPRFAYDSYRRFIQMYSDVVMEVPKSHFEKIIDAM 158 (873)
T ss_dssp BTCSSSCBCEEEEEECSSCCTTSSCEEEEETCCTTHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHH
T ss_conf 48878840487742050026427789980899989999999750772579999999984368732640606678899998
Q ss_pred ---------HC----------------------CCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCEEE
Q ss_conf ---------01----------------------99999972299999999999816998589999998199997762077
Q 000793 1067 ---------SS----------------------GMPWPGDEGWNLAWRSIKKVWASKWNERAFISCRKANLNHDNLCMAV 1115 (1282)
Q Consensus 1067 ---------SS----------------------g~s~aG~~g~e~l~~AIK~VWASlys~RAi~yRr~~GI~~~~v~MAV 1115 (1282)
|+ |.+|| ++..++++.||++||||+||+||+.||+.+|++++ .+|||
T Consensus 159 ~~~~~v~~ds~~taedl~~~~~~~~~~~~~~~~g~~fp-~dp~eqL~~Aik~V~aS~~~~RAi~YR~~~gi~~~-~~~AV 236 (873)
T 1kbl_A 159 KEEKGVHFDTDLTADDLKELAEKFKAVYKEAMNGEEFP-QEPKDQLMGAVKAVFRSWDNPRAIVYRRMNDIPGD-WGTAV 236 (873)
T ss_dssp HHHTCCCSGGGCCHHHHHHHHHHHHHHHHTTTTTCCCC-CCHHHHHHHHHHHHHHHTTSHHHHHHHHHTTCCGG-GCCEE
T ss_pred HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC-CCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCH-HCCEE
T ss_conf 87517575677887888999999999998750599987-56799999999999845488889999997699810-07468
Q ss_pred EEEEEECCC-----EEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 998510675-----329999369998998651221334666510134578771599905789898301456531245688
Q 000793 1116 LIQETICGD-----YAFVIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAMSFVTKKNNLKSPIVTCYPSKLIGLYGK 1190 (1282)
Q Consensus 1116 LVQemV~ad-----~SGVlfT~nP~tgd~~~i~IEav~GLGEsLVsG~~Gtp~~f~v~K~~~~~~~vl~~~sK~i~~~~~ 1190 (1282)
+||+||.++ .|||+||+||.||+++.+-.-.+.|+||.||+|.+ +|+.|.+ +
T Consensus 237 ~VQ~MV~g~~~~~s~sGV~FT~nP~tG~~~~~g~~li~a~GE~VV~G~~-tPd~~~~----------l------------ 293 (873)
T 1kbl_A 237 NVQTMVFGNKGETSGTGVAFTRNPSTGEKGIYGEYLINAQGEDVVAGVR-TPQPITQ----------L------------ 293 (873)
T ss_dssp EEEECCCTTSSTTCEEEEEEEECTTTCCEEEEEEEEESCCHHHHHHTSS-CCEEGGG----------H------------
T ss_pred EEEECCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEECCCCHHHHCCCC-CCHHHHH----------H------------
T ss_conf 9998135789996257999845899998660169996277356652875-8515555----------1------------
Q ss_pred CEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEC
Q ss_conf 60785159997520001489702224169742101235899887961101499999999999999860997359999989
Q 000793 1191 PSIIFRSDSNGEDLEKYAGAGLYDSVIMNDPEKVVLDYSRDPMVGDKSFQTSVFSKIAETGKIIESLYGYPQDIEGVLKD 1270 (1282)
Q Consensus 1191 ~~~i~rsdsnGedLe~~agaGl~~svp~~~~~~~~vdys~~plLtD~e~r~~~l~~La~ia~~IE~~fG~PQDIEwai~~ 1270 (1282)
+ . ..++. +.+|++++..||++||.||||||++++
T Consensus 294 --------------~----------------~-----------~~p~~-----~~~L~~~~~~lE~hy~~pqDIEfti~~ 327 (873)
T 1kbl_A 294 --------------E----------------N-----------DMPDC-----YKQFMDLAMKLEKHFRDMQDMEFTIEE 327 (873)
T ss_dssp --------------H----------------H-----------HCHHH-----HHHHHHHHHHHHHHHTSCEEEEEEEET
T ss_pred --------------C----------------C-----------CCHHH-----HHHHHHHHHHHHHHCCCCEEEEEEEEC
T ss_conf --------------1----------------2-----------68799-----999999999999983997698999989
Q ss_pred CEEEEEEECCC
Q ss_conf 96999962158
Q 000793 1271 GLIYVVQARPQ 1281 (1282)
Q Consensus 1271 gkLyILQsRPq 1281 (1282)
|+|||||+||.
T Consensus 328 g~L~iLQtRp~ 338 (873)
T 1kbl_A 328 GKLYFLQTRNG 338 (873)
T ss_dssp TEEEEEEEEEC
T ss_pred CEEEEEEECCC
T ss_conf 97999982331
No 4
>1h6z_A Pyruvate phosphate dikinase; transferase, tropical parasite, trypanosome; 3.00A {Trypanosoma brucei} PDB: 2x0s_A
Probab=1.00 E-value=1 Score=348.82 Aligned_cols=267 Identities=19% Similarity=0.228 Sum_probs=193.9
Q ss_pred CCCEEEECCC----CC---CCCCCHHHHHHHHHHHHCCCCCCCCCCEEECHHHHHHHHHHC-CCHHHHHHHHHHHHHHC-
Q ss_conf 6760364799----79---875465419799844318996458995041978999999811-53049999999984308-
Q 000793 964 RGKYAVSVED----FT---PDMVGAKSCNIKFLRERVPSWIKIPTSVAIPFGAFETVLSEN-INKDIANKISRLYKFIN- 1034 (1282)
Q Consensus 964 ~~~~vi~l~e----~~---~~~vGgKAAnLa~L~~~lp~g~~VP~GfvIPfgafe~fL~~~-~n~~L~~~I~~l~a~l~- 1034 (1282)
+.+||+++.+ .+ .+++|+|++||++|.+ .|+|||+||+||+.+|..|++.+ ...+++++|...++.++
T Consensus 3 ~~k~v~~f~~~~~~~~~~~~~llGgKganL~em~~---lglpVPpGF~Itteac~~~~~~~~~~~~l~~~i~~~l~~le~ 79 (913)
T 1h6z_A 3 AKKWVYYFGGGNADGNKNMKELLGGKGANLAEMVN---LGIPVPPGFTITTEACKTYQETETIPQEVADQVRENVSRVEK 79 (913)
T ss_dssp CCCCEEEECSSSCSCCTTCHHHHHHHHHHHHHHHH---TTCCCCCEEEECHHHHTTTTTSSCCCHHHHHHHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCCHHHHHHCCHHHHHHHHHHH---CCCCCCCCEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
T ss_conf 77879988887666884457643767655999997---789999918962999999997389958899999999999998
Q ss_pred -----CCCH-------------HHHHHHHHHHHCCCCCHHHHHH-HH----------HHHHHC---------CCC---C-
Q ss_conf -----9994-------------7899999999928999999999-99----------998801---------999---9-
Q 000793 1035 -----GGDL-------------SKLQEIQEAVLQMSAPLSLIYE-LK----------NKMRSS---------GMP---W- 1072 (1282)
Q Consensus 1035 -----~~d~-------------~~L~~IR~~I~~~~lP~eL~~e-L~----------~a~RSS---------g~s---~- 1072 (1282)
.++. ..+..+++.|+++.+++++++. |. .+||.+ +.+ |
T Consensus 80 ~~g~~fg~~~~PLLvsvrsga~~smpGmmdtilnlGlnd~~~~~~la~~~g~~~fa~d~Yrrfiq~~~~vv~~v~~~~fe 159 (913)
T 1h6z_A 80 EMGAKFGDPANPLLFSVRSGAAASMPGMMDTVLNLGLNKVTVDAWVRRAPRLERFVYDSYRRFITMYADIVMQVGREDFE 159 (913)
T ss_dssp HHCCBTTCTTSBCCEEEEESCTTC-----CCCCSBSCCHHHHHHHGGGCGGGHHHHHHHHHHHHHHHHHHHHCCCSTTTS
T ss_pred HHCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHHCCCCHHHHH
T ss_conf 72855478777652355216655540278998715999799999998740771679999999998734464388778899
Q ss_pred -------------------------------------CC----CCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCC
Q ss_conf -------------------------------------99----7229999999999981699858999999819999776
Q 000793 1073 -------------------------------------PG----DEGWNLAWRSIKKVWASKWNERAFISCRKANLNHDNL 1111 (1282)
Q Consensus 1073 -------------------------------------aG----~~g~e~l~~AIK~VWASlys~RAi~yRr~~GI~~~~v 1111 (1282)
.| ++-.++++.||+.||||+||+||+.||+.+|+++ ++
T Consensus 160 ~~~~~~k~~~g~~~d~~~~a~dl~~~~~~yk~~~~~~~g~~fp~dp~eqL~~AI~~v~aS~~s~RAi~YR~~~gi~~-~~ 238 (913)
T 1h6z_A 160 EALSRMKERRGTKFDTDLTASDLKELCDGYLELFELKTGCSFPQDPVMQLFAAIKAVFRSWGNPRATIYRRMNNITG-LL 238 (913)
T ss_dssp TTTHHHHHHHSCSCGGGCCHHHHHHHHHTTHHHHHHHSSSCCCCCHHHHHHHHHHHHHHTTTCTTTTTHHHHSCCCS-CC
T ss_pred HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCH-HH
T ss_conf 99999999739876567999999999999999999970999985899999999999998437578999999769991-22
Q ss_pred CEEEEEEEEECCC-----EEEEEEECCCCCCCCCCEEEEC-CCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCC
Q ss_conf 2077998510675-----3299993699989986512213-346665101345787715999057898983014565312
Q 000793 1112 CMAVLIQETICGD-----YAFVIHTKNPLSGDNSEIYTEI-VKGLGETLVGAYPGRAMSFVTKKNNLKSPIVTCYPSKLI 1185 (1282)
Q Consensus 1112 ~MAVLVQemV~ad-----~SGVlfT~nP~tgd~~~i~IEa-v~GLGEsLVsG~~Gtp~~f~v~K~~~~~~~vl~~~sK~i 1185 (1282)
.|||+||+||.++ .|||+||+||.||++. +++++ ..|+||.||+|.+ +|+.|++++.. .+ ..+.+
T Consensus 239 ~mAV~VQ~MV~g~~~~~s~SGV~FT~dP~TG~~~-~~ge~li~alGE~VVsG~v-tPd~~~v~~~~----~~---~~~~i 309 (913)
T 1h6z_A 239 GTAVNVQAMVFGNINDRSATGVAFSRSPSTGENF-FFGEYLVNAQGEDVVAGIR-TPQQINHSLSL----RW---AKAHG 309 (913)
T ss_dssp CCCEEEEECCCSCSSTTCEEEEEESSCSSSCCSS-CEEEEEESCCTTHHHHCCS-CCEESSHHHHH----HH---HTTSS
T ss_pred CCEEEEEEEECCCCCCCCEEEEEEECCCCCCCCC-EEEEEEEECCCCHHCCCCC-CCEEEEEECCC----CH---HHCCC
T ss_conf 6347999973268888613699983788888865-2468987347851304875-67079983463----10---01145
Q ss_pred CCCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEE
Q ss_conf 45688607851599975200014897022241697421012358998879611014999999999999998609973599
Q 000793 1186 GLYGKPSIIFRSDSNGEDLEKYAGAGLYDSVIMNDPEKVVLDYSRDPMVGDKSFQTSVFSKIAETGKIIESLYGYPQDIE 1265 (1282)
Q Consensus 1186 ~~~~~~~~i~rsdsnGedLe~~agaGl~~svp~~~~~~~~vdys~~plLtD~e~r~~~l~~La~ia~~IE~~fG~PQDIE 1265 (1282)
... . ...... +..+.+.+++ +.+|++++..||++||+|||||
T Consensus 310 ~~~----------------------~--~~~~~~---------~~l~~l~p~~-----~~eLa~~a~~lE~hyg~pqDIE 351 (913)
T 1h6z_A 310 VGE----------------------E--ERRKRY---------PSMEEAMPEN-----YRLLCDVRKRLENHYRDMQDLE 351 (913)
T ss_dssp CCH----------------------H--HHHHHS---------CCHHHHSHHH-----HHHHHHHHHHHHHHHTSCEEEE
T ss_pred CHH----------------------H--HCCCCC---------HHHHHCCHHH-----HHHHHHHHHHHHHHHCCCCEEE
T ss_conf 434----------------------3--114582---------4444318999-----9999999999999839971379
Q ss_pred EEEECCEEEEEEECCC
Q ss_conf 9998996999962158
Q 000793 1266 GVLKDGLIYVVQARPQ 1281 (1282)
Q Consensus 1266 wai~~gkLyILQsRPq 1281 (1282)
|++++|+|||||+||.
T Consensus 352 wai~~G~LyILQaRP~ 367 (913)
T 1h6z_A 352 FTVQDGRLWLLQCRNG 367 (913)
T ss_dssp EEEETTEEEEEEEEEC
T ss_pred EEEECCEEEEEEECCC
T ss_conf 9987997999984576
No 5
>2x0s_A Pyruvate phosphate dikinase; transferase, tropical parasite; 3.00A {Trypanosoma brucei}
Probab=1.00 E-value=1 Score=332.42 Aligned_cols=267 Identities=20% Similarity=0.206 Sum_probs=180.2
Q ss_pred CCEEEECC----CCC---CCCCCHHHHHHHHHHHHCCCCCCCCCCEEECHHHHHHHHHHC-CCHHHHHHHHHHHHHHC--
Q ss_conf 76036479----979---875465419799844318996458995041978999999811-53049999999984308--
Q 000793 965 GKYAVSVE----DFT---PDMVGAKSCNIKFLRERVPSWIKIPTSVAIPFGAFETVLSEN-INKDIANKISRLYKFIN-- 1034 (1282)
Q Consensus 965 ~~~vi~l~----e~~---~~~vGgKAAnLa~L~~~lp~g~~VP~GfvIPfgafe~fL~~~-~n~~L~~~I~~l~a~l~-- 1034 (1282)
.+||+.+. |.+ .++||||+||||+|.+ .|++||+|||||+.+|++|++.+ ..+.+...|......++
T Consensus 4 ~k~vy~F~~~~~e~~~~~~~LvGGKgAnLgEM~~---~GlpVP~GF~iTt~Ay~~fl~~~~l~~~i~~~l~~~l~~le~~ 80 (913)
T 2x0s_A 4 KKWVYYFGGGNADGNKNMKELLGGKGANLAEMVN---LGIPVPPGFTITTEACKTYQETETIPQEVADQVRENVSRVEKE 80 (913)
T ss_dssp CCCEEEECSSSCSSCTTCHHHHHHHHHHHHHHHH---TTCCCCCEEEECHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCCCCHHHHCCHHHHHHHHHHH---CCCCCCCCEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 7479987998756884526518388888999997---8389999786339999999972897489999999999988998
Q ss_pred ----CCCHH-------------HH--------------HHHHHHHHCCCCCHH------------------------HHH
Q ss_conf ----99947-------------89--------------999999992899999------------------------999
Q 000793 1035 ----GGDLS-------------KL--------------QEIQEAVLQMSAPLS------------------------LIY 1059 (1282)
Q Consensus 1035 ----~~d~~-------------~L--------------~~IR~~I~~~~lP~e------------------------L~~ 1059 (1282)
.++.. .+ ..++.++...+-++. +..
T Consensus 81 ~~~~~gd~~~pLl~sVRsga~~smpgmmdtilnlgln~~~v~~l~~~~~~~~~~a~d~Yrr~~~~y~~~v~~v~~~~fe~ 160 (913)
T 2x0s_A 81 MGAKFGDPANPLLFSVRSGAAASMPGMMDTVLNLGLNKVTVDAWVRRAPRLERFVYDSYRRFITMYADIVMQVGREDFEE 160 (913)
T ss_dssp HSCBTTCTTSBCCEEEEEECSCCC----CEEEEETCCHHHHTTTSTTCTTSHHHHHHHHHHHHHHHHHHHHCCCSHHHHH
T ss_pred HHHHHCCCCCCCHHEECCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
T ss_conf 54541785553021010255335776405577434657899999986798488999999999987778864777665899
Q ss_pred HHHH--HHHHCCC-------CCCCCC------------------CHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCC
Q ss_conf 9999--9880199-------999972------------------299999999999816998589999998199997762
Q 000793 1060 ELKN--KMRSSGM-------PWPGDE------------------GWNLAWRSIKKVWASKWNERAFISCRKANLNHDNLC 1112 (1282)
Q Consensus 1060 eL~~--a~RSSg~-------s~aG~~------------------g~e~l~~AIK~VWASlys~RAi~yRr~~GI~~~~v~ 1112 (1282)
.+.. +.|||.. +|+|+. ..++++.||+.||||+||+||+.||+..|+++. +.
T Consensus 161 ~~~~~~~~rssa~~~dl~~as~a~~~~tyl~v~~~~~g~~fp~d~~~qL~~ai~~vfaSl~t~RAi~YR~~~g~~~~-~~ 239 (913)
T 2x0s_A 161 ALSRMKERRGTKFDTDLTASDLKELCDGYLELFELKTGCSFPQDPVMQLFAAIKAVFRSWGNPRATIYRRMNNITGL-LG 239 (913)
T ss_dssp HHHHHHHHHTCSCGGGCCHHHHHHHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHHHHHHHCHHHHTHHHHSCCCCC-CC
T ss_pred HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCC-CC
T ss_conf 99999986086643459888999999999999998738877767899999999999987358879999985699853-45
Q ss_pred EEEEEEEEECCC-----EEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 077998510675-----329999369998998651221334666510134578771599905789898301456531245
Q 000793 1113 MAVLIQETICGD-----YAFVIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAMSFVTKKNNLKSPIVTCYPSKLIGL 1187 (1282)
Q Consensus 1113 MAVLVQemV~ad-----~SGVlfT~nP~tgd~~~i~IEav~GLGEsLVsG~~Gtp~~f~v~K~~~~~~~vl~~~sK~i~~ 1187 (1282)
+||.||.||.++ .|||+||+||.||++..+.+.+++||||.||+|.+ +|+.|...+... .+ ..+.++.
T Consensus 240 laV~VQ~MV~~~~~~~s~SGVmFT~dp~TG~~~~~~~~~~~glGE~VV~G~v-tPd~~~~~~~~~---~~---~~~~~~~ 312 (913)
T 2x0s_A 240 TAVNVQAMVFGNINDRSATGVAFSRSPSTGENFFFGEYLVNAQGEDVVAGIR-TPQQINHSLSLR---WA---KAHGVGE 312 (913)
T ss_dssp CEEEEEECCCSCSSTTCEEEEEESSCTTTCCSSCEEEEEESCCTTHHHHCSS-CCBCSSHHHHHH---HH---HTTTCCH
T ss_pred CCEEEEEEEECCCCCCCCCEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCC-CCCCCCCCHHHH---HH---HHCCCCC
T ss_conf 2238988644156764440589841888898767899835776840104777-872022104344---54---4303330
Q ss_pred CCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEE
Q ss_conf 68860785159997520001489702224169742101235899887961101499999999999999860997359999
Q 000793 1188 YGKPSIIFRSDSNGEDLEKYAGAGLYDSVIMNDPEKVVLDYSRDPMVGDKSFQTSVFSKIAETGKIIESLYGYPQDIEGV 1267 (1282)
Q Consensus 1188 ~~~~~~i~rsdsnGedLe~~agaGl~~svp~~~~~~~~vdys~~plLtD~e~r~~~l~~La~ia~~IE~~fG~PQDIEwa 1267 (1282)
+.....|....-.. ......|.+++..||.||+.||||||+
T Consensus 313 ----------------------------------k~~~~~~~~~~~~~-----p~~~~~l~~~~~~lE~hy~~~qdiE~a 353 (913)
T 2x0s_A 313 ----------------------------------EERRKRYPSMEEAM-----PENYRLLCDVRKRLENHYRDMQDLEFT 353 (913)
T ss_dssp ----------------------------------HHHHHHSCCHHHHS-----HHHHHHHHHHHHHHHHHHSSCEEEEEE
T ss_pred ----------------------------------CCCCCCCCCHHHHH-----HHHHHHHHHHHHHHHHHCCCHHHHHHH
T ss_conf ----------------------------------02345566265554-----799999999999999863848775787
Q ss_pred EECCEEEEEEECCC
Q ss_conf 98996999962158
Q 000793 1268 LKDGLIYVVQARPQ 1281 (1282)
Q Consensus 1268 i~~gkLyILQsRPq 1281 (1282)
+++|+||+||+||.
T Consensus 354 ~~~g~l~ilq~R~~ 367 (913)
T 2x0s_A 354 VQDGRLWLLQCRNG 367 (913)
T ss_dssp EETTEEEEEEEEEC
T ss_pred HCCCCHHHHHHHHC
T ss_conf 60772698775222
No 6
>2ols_A Phosphoenolpyruvate synthase; MC structural genomics, PSI-2, protein structure initiative, M center for structural genomics, transferase; 2.40A {Neisseria meningitidis}
Probab=1.00 E-value=1 Score=48.97 Aligned_cols=100 Identities=14% Similarity=0.113 Sum_probs=69.1
Q ss_pred CCEEEEEEEEEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCC--CCCEEEECCCCCCCCCHHHHHCCCCCCEEEE-
Q ss_conf 8277530158899999322001122346899299993777754568--7717997699999650110100368720678-
Q 000793 829 CWQVISPVEVCGFITSVNELITLQNKVYRRPTIIIASRITGEEEIP--VGVVAVLTPDMPDVLSHVSIRARNNKVCFAT- 905 (1282)
Q Consensus 829 ~wqvispG~A~G~L~~V~~l~~~~~~~~~~p~Ili~~~~~G~EEIP--~~VaGVit~~~~~~LSHv~VRARn~gVp~at- 905 (1282)
.-..++||.+.|+++++....+.. ....+.||+.+.++- +++| ..++||||..-. ..||.+|.||.+|||-+.
T Consensus 362 ~G~~~~~g~~~G~v~~~~~~~~~~--~~~~g~ILv~~~~~p-~~~~~~~~~~givt~~Gg-~tSHaAivar~~giP~vvg 437 (794)
T 2ols_A 362 EGRAIGQKVGQGKVRLIKDASEMD--SVEAGDVLVTDMTDP-DWEPVMKRASAIVTNRGG-RTCHAAIIARELGIPAVVG 437 (794)
T ss_dssp BCBC--CCCCCBCBC----------------CEEEESCCCG-GGSHHHHTCSEEEESSCC-TTCHHHHHTTC---CEEEC
T ss_pred CCCCCCCCCCEEEEEEECCHHHHH--HCCCCEEEEECCCCH-HHHHHHHHCCEEEECCCC-CCCHHHHHHHHCCCCEEEC
T ss_conf 363157874069999964789997--567874999778998-999977647099984897-5149999986779999985
Q ss_pred ECCHHHHHHHHHCCCCEEEE---EECCCCEEEEE
Q ss_conf 32548888877408982999---98277359953
Q 000793 906 CFDQNILRNLRLKEGKAVSI---RLKSTNLIISD 936 (1282)
Q Consensus 906 ~~D~~~~~~l~~l~Gk~V~l---~vs~~~v~l~~ 936 (1282)
|.+ .... -.+|..|.+ ..+...|...+
T Consensus 438 ~~~--~~~~--~~~G~~v~v~c~Dg~~G~v~~g~ 467 (794)
T 2ols_A 438 CGN--ATEL--LKNGQEVTVSCAEGDTGFIYAGL 467 (794)
T ss_dssp CTT--HHHH--SCSSCCEECCCC--CCCBCEECC
T ss_pred CCC--HHHC--CCCCCEEEEEECCCCCCEEEECC
T ss_conf 754--5650--65897899996689863699688
No 7
>2e28_A Pyruvate kinase, PK; allosteric, transferase; 2.40A {Geobacillus stearothermophilus}
Probab=1.00 E-value=1 Score=47.62 Aligned_cols=98 Identities=12% Similarity=0.125 Sum_probs=67.4
Q ss_pred EEEEEEEEEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCC--CCCEEEECCCCCCCCCHHHHHCCCCCCEEEEECC
Q ss_conf 77530158899999322001122346899299993777754568--7717997699999650110100368720678325
Q 000793 831 QVISPVEVCGFITSVNELITLQNKVYRRPTIIIASRITGEEEIP--VGVVAVLTPDMPDVLSHVSIRARNNKVCFATCFD 908 (1282)
Q Consensus 831 qvispG~A~G~L~~V~~l~~~~~~~~~~p~Ili~~~~~G~EEIP--~~VaGVit~~~~~~LSHv~VRARn~gVp~at~~D 908 (1282)
..++||.+.|+++++....+.. .....+.||+++..+-.+ +| ..++||+|..-+ ..||.+++||++|||-+.--.
T Consensus 482 ~~~~~g~~~G~v~v~~~~~~~~-~~~~~g~ILVa~~l~Ps~-~~~l~~~~Givt~~Gg-~tSHaAIlAR~lgIPaVvG~~ 558 (587)
T 2e28_A 482 QGIGRKSAFGKAVVAKTAEEAR-QKMVDGGILVTVSTDADM-MPAIEKAAAIITEEGG-LTSHAAVVGLSLGIPVIVGVE 558 (587)
T ss_dssp EEESSCEECCBEEECSSHHHHH-HHCCTTCEEEESCCCGGG-HHHHTTCSEEEESSCC-TTSHHHHHHHHHTCCEEECCT
T ss_pred CCCCCCEEEEEEEEECCHHHHH-HCCCCCEEEEECCCCHHH-HHHHHHCEEEEECCCC-CCCHHHHHHHHCCCCEEEECC
T ss_conf 3011875875179958878886-258998599987799899-9977751799976898-767999998875998899344
Q ss_pred HHHHHHHHHCCCCEEEEEECCCCEEE
Q ss_conf 48888877408982999982773599
Q 000793 909 QNILRNLRLKEGKAVSIRLKSTNLII 934 (1282)
Q Consensus 909 ~~~~~~l~~l~Gk~V~l~vs~~~v~l 934 (1282)
++... -.+|+.|.+......+..
T Consensus 559 -~~~~~--l~~G~~v~vDg~~G~V~~ 581 (587)
T 2e28_A 559 -NATTL--FKDGQEITVDGGFGAVYR 581 (587)
T ss_dssp -THHHH--SCTTCBEEEETTTTEEEE
T ss_pred -CHHHH--CCCCCEEEEECCCCEEEE
T ss_conf -08872--779989999999999998
No 8
>1vbg_A Pyruvate,orthophosphate dikinase; transferase, maize, riken structural genomics/proteomics INI RSGI, structural genomics; 2.30A {Zea mays} SCOP: c.1.12.2 c.8.1.1 d.142.1.5 PDB: 1vbh_A*
Probab=1.00 E-value=1 Score=47.47 Aligned_cols=104 Identities=18% Similarity=0.265 Sum_probs=64.2
Q ss_pred CCCEEEEEEEEEEEEEEECCCCCCCC-CCCCCCEEEEEECCCCCCCCC--CCCEEEECCCCCCCCCHHHHHCCCCCCEEE
Q ss_conf 98277530158899999322001122-346899299993777754568--771799769999965011010036872067
Q 000793 828 GCWQVISPVEVCGFITSVNELITLQN-KVYRRPTIIIASRITGEEEIP--VGVVAVLTPDMPDVLSHVSIRARNNKVCFA 904 (1282)
Q Consensus 828 ~~wqvispG~A~G~L~~V~~l~~~~~-~~~~~p~Ili~~~~~G~EEIP--~~VaGVit~~~~~~LSHv~VRARn~gVp~a 904 (1282)
..-...+||.+.|++++ + ..+... ....+|.||+...++= +++| ..+.||||..-+ ..||.+|.||++|||-+
T Consensus 396 ~~G~~as~G~a~G~vv~-~-~~~~~~~~~~g~~~ILV~~~t~P-~~~~~~~~a~GivT~~GG-~tSHaAIvAR~lGiP~V 471 (876)
T 1vbg_A 396 ATGLPASPGAAVGQVVF-T-AEDAEAWHSQGKAAILVRAETSP-EDVGGMHAAVGILTERGG-MTSHAAVVARGWGKCCV 471 (876)
T ss_dssp EECEEEECSEEEEEEES-S-HHHHHHHHHTTCCEEEEESCCCT-TSHHHHHHSSEEEESSCC-TTSHHHHHHHHTTCCEE
T ss_pred ECCCCCCCCEEEEEEEE-C-HHHHHHHHHCCCCEEEEECCCCH-HHHHHHHHCCEEEECCCC-CCCHHHHHHHHCCCCEE
T ss_conf 04744689818999997-7-89999875145987999827998-999767656389977898-76699999867599999
Q ss_pred E-ECCHHHHH---------HHHHCCCCEEEEEECCCCEEEEE
Q ss_conf 8-32548888---------87740898299998277359953
Q 000793 905 T-CFDQNILR---------NLRLKEGKAVSIRLKSTNLIISD 936 (1282)
Q Consensus 905 t-~~D~~~~~---------~l~~l~Gk~V~l~vs~~~v~l~~ 936 (1282)
. |.+.. ++ .-.-.+|..|.+..+...|.+.+
T Consensus 472 vG~~~~~-~~~~~~~~~~~~~~l~~G~~vtvDG~~G~V~~g~ 512 (876)
T 1vbg_A 472 SGCSGIR-VNDAEKLVTIGGHVLREGEWLSLNGSTGEVILGK 512 (876)
T ss_dssp ECCTTEE-EEGGGTEEEETTEEEETTCEEEEETTTTEEEESC
T ss_pred ECCCCCE-ECCCCCEEEECCEEECCCCEEEEECCCCEEEECC
T ss_conf 8578755-4011466876784623898899989988799798
No 9
>1kbl_A PPDK, pyruvate phosphate dikinase; transferase, phosphotransferase; 1.94A {Clostridium symbiosum} SCOP: c.1.12.2 c.8.1.1 d.142.1.5 PDB: 1kc7_A* 1dik_A 1ggo_A 1jde_A 2dik_A 2r82_A 2fm4_A
Probab=1.00 E-value=1 Score=47.33 Aligned_cols=105 Identities=18% Similarity=0.235 Sum_probs=64.7
Q ss_pred CCCCEEEEEEEEEEEEEEECCCCCCCC-CCCCCCEEEEEECCCCCCCCCC--CCEEEECCCCCCCCCHHHHHCCCCCCEE
Q ss_conf 898277530158899999322001122-3468992999937777545687--7179976999996501101003687206
Q 000793 827 LGCWQVISPVEVCGFITSVNELITLQN-KVYRRPTIIIASRITGEEEIPV--GVVAVLTPDMPDVLSHVSIRARNNKVCF 903 (1282)
Q Consensus 827 ~~~wqvispG~A~G~L~~V~~l~~~~~-~~~~~p~Ili~~~~~G~EEIP~--~VaGVit~~~~~~LSHv~VRARn~gVp~ 903 (1282)
+..-...+||.+.|++++ + ..+... ....+|.||+...++ -++++. .+.||||..-+ ..||.+|.||++|||-
T Consensus 391 l~~G~~as~G~a~G~vv~-~-~~~a~~~~~~g~~~ILV~~~t~-P~~~~~~~~a~GivT~~GG-~tSHaAIvAR~lGiP~ 466 (873)
T 1kbl_A 391 IGSALPASPGAAAGKVYF-T-ADEAKAAHEKGERVILVRLETS-PEDIEGMHAAEGILTVRGG-MTSHAAVVARGMGTCC 466 (873)
T ss_dssp EEECEEEECSEEEEEEES-S-HHHHHHHHHTTCCEEEEESSCC-GGGHHHHHHCSEEEESSCC-TTSHHHHHHHHHTCEE
T ss_pred ECCCCCCCCCEEEEEEEE-C-HHHHHHHHCCCCCEEEEECCCC-HHHHHHHHHCCEEEECCCC-CCCHHHHHHHHCCCCE
T ss_conf 205820468638999998-4-8898776325798799978899-8999978762389966898-7669999986769999
Q ss_pred EE-ECCHHHHH---------HHHHCCCCEEEEEECCCCEEEEE
Q ss_conf 78-32548888---------87740898299998277359953
Q 000793 904 AT-CFDQNILR---------NLRLKEGKAVSIRLKSTNLIISD 936 (1282)
Q Consensus 904 at-~~D~~~~~---------~l~~l~Gk~V~l~vs~~~v~l~~ 936 (1282)
+. |.+.. ++ .-.-.+|..|.+..+...|.+.+
T Consensus 467 VvG~~~~~-i~~~~~~~~~~~~~l~~G~~vtvDG~~G~V~~g~ 508 (873)
T 1kbl_A 467 VSGCGEIK-INEEAKTFELGGHTFAEGDYISLDGSTGKIYKGD 508 (873)
T ss_dssp EECCTTCE-EETTTTEEEETTEEEETTCEEEEETTTCEEEESC
T ss_pred EECCCCCE-ECCCCCEEEECCEEECCCCEEEEECCCCEEEECC
T ss_conf 98578754-3011467876785624898899989988799798
No 10
>3t05_A Pyruvate kinase, PK; tetramer, glycolysis, transferase; 3.05A {Staphylococcus aureus subsp} PDB: 3t07_A* 3t0t_A*
Probab=1.00 E-value=1 Score=46.95 Aligned_cols=97 Identities=14% Similarity=0.169 Sum_probs=67.5
Q ss_pred EEEEEEEEEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCC--CCCEEEECCCCCCCCCHHHHHCCCCCCEEEEECC
Q ss_conf 77530158899999322001122346899299993777754568--7717997699999650110100368720678325
Q 000793 831 QVISPVEVCGFITSVNELITLQNKVYRRPTIIIASRITGEEEIP--VGVVAVLTPDMPDVLSHVSIRARNNKVCFATCFD 908 (1282)
Q Consensus 831 qvispG~A~G~L~~V~~l~~~~~~~~~~p~Ili~~~~~G~EEIP--~~VaGVit~~~~~~LSHv~VRARn~gVp~at~~D 908 (1282)
+.+++|.+.|+++++....+.. ..+..+.||+++..+-. +++ ..++||+|..-+ ..||.++.||++|||-+.--.
T Consensus 501 ~~i~~G~v~G~v~vv~~~~da~-~~~~~g~ILVa~~l~Ps-~~~~l~~v~GiVte~Gg-~tSHaAIlAR~lgIPaVvG~~ 577 (606)
T 3t05_A 501 QGIGRGSVVGTTLVAETVKDLE-GKDLSDKVIVTNSIDET-FVPYVEKALGLITEENG-ITSPSAIVGLEKGIPTVVGVE 577 (606)
T ss_dssp EEESSCEEEEEEEECSSGGGGS-SSCCSSEEEEESCCCTT-THHHHTTSSEEEESSCC-SSSHHHHHHHHTTCCEEECCT
T ss_pred CCCCCCEEEEEEEEECCHHHHH-HCCCCCEEEEECCCCHH-HHHHHHHHEEEEECCCC-CCCHHHHHHHHCCCCEEEECC
T ss_conf 5321204899999978867886-45898869998889989-99998863799863798-556899997547999999264
Q ss_pred HHHHHHHHHCCCCEEEEEECCCCEEE
Q ss_conf 48888877408982999982773599
Q 000793 909 QNILRNLRLKEGKAVSIRLKSTNLII 934 (1282)
Q Consensus 909 ~~~~~~l~~l~Gk~V~l~vs~~~v~l 934 (1282)
. ... .-.+|+.|.+.... |..+
T Consensus 578 ~-a~~--~l~~G~~V~vDg~~-G~V~ 599 (606)
T 3t05_A 578 K-AVK--NISNNVLVTIDAAQ-GKIF 599 (606)
T ss_dssp T-HHH--HSCSSCEEEEETTT-TEEE
T ss_pred C-HHH--HCCCCCEEEEECCC-CEEE
T ss_conf 2-786--17799999999999-9899
Done!