Query 000802
Match_columns 1278
No_of_seqs 712 out of 6290
Neff 9.3
Searched_HMMs 29240
Date Tue Mar 26 16:51:45 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/000802.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_572-576//hhsearch_pdb/000802hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2a5y_B CED-4; apoptosis; HET: 1.0 1 1 365.4 23.8 303 186-501 129-472 (549)
2 3sfz_A APAF-1, apoptotic pepti 1.0 1 1 355.6 26.1 307 181-500 120-452 (1249)
3 3rgz_A Protein brassinosteroid 1.0 1 1 342.6 27.0 435 552-1009 94-554 (768)
4 3rgz_A Protein brassinosteroid 1.0 1 1 342.1 23.9 418 553-990 121-556 (768)
5 3jrn_A AT1G72930 protein; TIR 1.0 1 1 327.0 8.7 171 8-181 3-174 (176)
6 3ozi_A L6TR; plant TIR domain, 1.0 1 1 325.4 9.1 171 7-179 29-202 (204)
7 1vt4_I APAF-1 related killer D 1.0 1 1 313.3 22.5 282 184-493 127-436 (1221)
8 3t6q_A CD180 antigen; protein- 1.0 1 1 312.7 32.9 423 547-988 46-516 (606)
9 3vq2_A TLR4, TOLL-like recepto 1.0 1 1 308.1 30.2 123 558-681 32-163 (606)
10 1z6t_A APAF-1, apoptotic prote 1.0 1 1 306.1 25.0 303 181-497 120-449 (591)
No 1
>2a5y_B CED-4; apoptosis; HET: ATP; 2.60A {Caenorhabditis elegans} SCOP: a.4.5.80 a.77.1.3 c.37.1.20 PDB: 3lqq_A* 3lqr_A*
Probab=1.00 E-value=1 Score=365.43 Aligned_cols=303 Identities=16% Similarity=0.144 Sum_probs=244.0
Q ss_pred CCCCHHHHHHHHHHHHHCC-CCCEEEEEEEECCCCCHHHHHHHHHH----HHHCCCCCCEEEEECHHHCCCCCCHHHHHH
Q ss_conf 6332499999999863048-99806999980499824589999998----850465541782401001026787799999
Q 000802 186 ELVGIESRLEKLKVHMDTR-SNDVRMIGIWGMGGLGKTTLARVVYD----LISHEFDGSSFLADVREKCDKEGSVISLQK 260 (1278)
Q Consensus 186 ~~vGr~~~~~~l~~~L~~~-~~~~~vv~I~G~gGiGKTtLa~~v~~----~~~~~f~~~~~~~~~~~~~~~~~~~~~l~~ 260 (1278)
..|||+.++++|..+|... ..+.++|+|+|||||||||||+++|+ +++.+|++++|+ ++++... .+...+++
T Consensus 129 ~~~GR~~~~~~l~~~L~~~~~~~~~vv~I~G~gGvGKTtLA~~v~~~~~~~~~~~F~~~~wv-~vs~~~~--~~~~~~~~ 205 (549)
T 2a5y_B 129 TCYIREYHVDRVIKKLDEMCDLDSFFLFLHGRAGSGKSVIASQALSKSDQLIGINYDSIVWL-KDSGTAP--KSTFDLFT 205 (549)
T ss_dssp CSCCCHHHHHHHHHHHHHHTTSSSEEEEEECSTTSSHHHHHHHHHHHCSSTBTTTBSEEEEE-ECCCCST--THHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEE-EECCCCC--CCHHHHHH
T ss_conf 60784179999999872515789628999869999889999999984069874669957999-9789878--79999999
Q ss_pred HHHHHHHCCCC-CCCC-----CHHHHHHHHHHHHCCC-CCEEEEECCCCHHHHHHHHCCCCCCCCCCEEEEEECCHHHHH
Q ss_conf 99998817879-9854-----5222189999998179-824998189994656676269997799968999918834453
Q 000802 261 QLLSDLLKLAD-NSIR-----NVYDGINMLRIRLRRK-KVLVVIDDVAHPDHLRSLVGEPDWFGPGSQIIITTRNEHLLK 333 (1278)
Q Consensus 261 ~ll~~l~~~~~-~~~~-----~~~~~~~~l~~~l~~k-~~LiVLDdv~~~~~~~~l~~~~~~~~~gs~iiiTTR~~~v~~ 333 (1278)
.++.++..... .... +.......+++.|+++ |+||||||||+.+++ .+.. .+||+||||||++.++.
T Consensus 206 ~il~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~~kr~LlVLDdv~~~~~~-~~~~-----~~gs~ilvTTR~~~v~~ 279 (549)
T 2a5y_B 206 DILLMLKSEDDLLNFPSVEHVTSVVLKRMICNALIDRPNTLFVFDDVVQEETI-RWAQ-----ELRLRCLVTTRDVEISN 279 (549)
T ss_dssp HHHHHHTTTSCCTTCCCCTTCCHHHHHHHHHHHHTTSTTEEEEEEEECCHHHH-HHHH-----HTTCEEEEEESBGGGGG
T ss_pred HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCHHH-CCCC-----CCCCEEEEECCCHHHHH
T ss_conf 99999853755345555331469999999999976898489999799971441-5432-----69988999749779999
Q ss_pred HCC-CCCEEECCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHH-HHC
Q ss_conf 228-563575699998899999998612999998249999999999919991579999866169999999999999-843
Q 000802 334 LHR-VRKVYKLEALTYDEAFRLLCLKAFDTHKPFEEYVELAESVVKYASGLPLALKVLGSFLFGRAVHEWTSALER-IKR 411 (1278)
Q Consensus 334 ~~~-~~~~~~l~~L~~~ea~~Lf~~~af~~~~~~~~~~~~~~~i~~~~~g~PLal~~lg~~L~~~~~~~w~~~l~~-l~~ 411 (1278)
.++ ...+|+|++|+.+||++||.++||.... .+++.+++++|+++|+|+|||++++|+.|+.+. .+|...+.. +..
T Consensus 280 ~~~~~~~~~~l~~L~~~ea~~Lf~~~a~~~~~-~~~~~~~~~~I~~~c~GlPLAl~~~g~~l~~~~-w~~~~~l~~~l~~ 357 (549)
T 2a5y_B 280 AASQTCEFIEVTSLEIDECYDFLEAYGMPMPV-GEKEEDVLNKTIELSSGNPATLMMFFKSCEPKT-FEKMAQLNNKLES 357 (549)
T ss_dssp GCCSCEEEEECCCCCHHHHHHHHHHTSCCCC---CHHHHHHHHHHHHHTTCHHHHHHHHTTCCSSS-HHHHHHHHHHHHH
T ss_pred HCCCCCEEEECCCCCHHHHHHHHHHHHCCCCC-CHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCH-HHHHHHHHHHHHC
T ss_conf 70889738989998989999999987448998-556899999999995998399999999844344-8999875787613
Q ss_pred CCCHHHHHHHHHCCCCCCHHHHHHHH-----------HHHCCCCCCCHHHHHHHHHHC--CCCH-----------HHHHH
Q ss_conf 99812788997201388588899998-----------761013899868999998657--9984-----------67799
Q 000802 412 DPEYEILSILQISFDGLKEVEKKIFL-----------DVVCFFKGRKRDYVSKILKSC--DFDP-----------VIGIA 467 (1278)
Q Consensus 412 ~~~~~i~~~l~~sy~~L~~~~k~~fl-----------~~a~f~~~~~~~~l~~~~~~~--~~~~-----------~~~i~ 467 (1278)
.....+..++++||+.|+.+.|.||+ +||+||+++++. +.+|.++ |+.. ..++.
T Consensus 358 ~~~~~i~~~l~~Sy~~L~~~lk~~f~~Ls~~er~l~~~ls~fp~~~~i~--i~~w~a~~~G~i~~~~~~~~~~~~~~~l~ 435 (549)
T 2a5y_B 358 RGLVGVECITPYSYKSLAMALQRCVEVLSDEDRSALAFAVVMPPGVDIP--VKLWSCVIPVDICSNEEEQLDDEVADRLK 435 (549)
T ss_dssp HCSSTTCCCSSSSSSSHHHHHHHHHHTSCHHHHHHTTGGGSSCTTCCEE--HHHHHHHSCC-------CCCTHHHHHHHH
T ss_pred CCHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHEEEECCCCEEE--EEEEEEECCCEECCCCCCCCHHHHHHHHH
T ss_conf 6477789897516202267999997526522336743235608997666--53311013550026778999999999999
Q ss_pred HHHHCCCCCEEC---CCEEEECHHHHHHHHHHHHCCC
Q ss_conf 998401360508---8819700789999999864047
Q 000802 468 VLIEKSLLTVDG---ANRLWTHDLLQEMGRQIVRRQS 501 (1278)
Q Consensus 468 ~L~~~~Li~~~~---~~~~~mHdli~~~~~~i~~~~~ 501 (1278)
.|++++|++... ..++.|||++|+|+++++.+++
T Consensus 436 ~L~~rsLl~~~~~~~~~~~~mHdlv~~~a~~~~~~~~ 472 (549)
T 2a5y_B 436 RLSKRGALLSGKRMPVLTFKIDHIIHMFLKHVVDAQT 472 (549)
T ss_dssp HTTTBSSCSEEECSSSCEEECCHHHHHHHHTTSCTHH
T ss_pred HHHHCCCEEEECCCCCEEEEECHHHHHHHHHHHHHHH
T ss_conf 9987588367147980499967699999999988989
No 2
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=1.00 E-value=1 Score=355.62 Aligned_cols=307 Identities=21% Similarity=0.284 Sum_probs=247.6
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHH---HHCCCCCCEEEEECHHHCCCCCCHHH
Q ss_conf 578886332499999999863048998069999804998245899999988---50465541782401001026787799
Q 000802 181 LKIPKELVGIESRLEKLKVHMDTRSNDVRMIGIWGMGGLGKTTLARVVYDL---ISHEFDGSSFLADVREKCDKEGSVIS 257 (1278)
Q Consensus 181 ~~~~~~~vGr~~~~~~l~~~L~~~~~~~~vv~I~G~gGiGKTtLa~~v~~~---~~~~f~~~~~~~~~~~~~~~~~~~~~ 257 (1278)
+..+..||||+.++++|..+|....++.++|+|+||||+||||||+++|++ ....|+..+||..+.+.... . ...
T Consensus 120 p~~~~~~vgR~~~~~~l~~~l~~~~~~~~~v~i~G~gG~GKTtLa~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~-~~~ 197 (1249)
T 3sfz_A 120 PQRPVIFVTRKKLVHAIQQKLWKLNGEPGWVTIYGMAGCGKSVLAAEAVRDHSLLEGCFSGGVHWVSIGKQDKS-G-LLM 197 (1249)
T ss_dssp CCCCSSCCCCHHHHHHHHHHHHTTTTSCEEEEEECSTTSSHHHHHHHHTCCHHHHTTTSTTCEEEEECCSCCHH-H-HHH
T ss_pred CCCCCEECCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHCCHHHHHHHCCCEEEEEEECCCCCH-H-HHH
T ss_conf 99986412579999999999861358877799991898888899999860756788627881799997885726-7-999
Q ss_pred HHHHHHHHHHCCCC---CCCCCHHHHHHHHHHHHCCC--CCEEEEECCCCHHHHHHHHCCCCCCCCCCEEEEEECCHHHH
Q ss_conf 99999998817879---98545222189999998179--82499818999465667626999779996899991883445
Q 000802 258 LQKQLLSDLLKLAD---NSIRNVYDGINMLRIRLRRK--KVLVVIDDVAHPDHLRSLVGEPDWFGPGSQIIITTRNEHLL 332 (1278)
Q Consensus 258 l~~~ll~~l~~~~~---~~~~~~~~~~~~l~~~l~~k--~~LiVLDdv~~~~~~~~l~~~~~~~~~gs~iiiTTR~~~v~ 332 (1278)
....++..+..... ....+.....+.++..+.++ |+||||||||+..+|+.+ ++||+||||||++.++
T Consensus 198 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~LlvlDd~~~~~~~~~~-------~~~~~ilvTtR~~~~~ 270 (1249)
T 3sfz_A 198 KLQNLCMRLDQEESFSQRLPLNIEEAKDRLRVLMLRKHPRSLLILDDVWDPWVLKAF-------DNQCQILLTTRDKSVT 270 (1249)
T ss_dssp HHHHHHHHHTTTCTTCSSCCSSHHHHHHHHHHHTSSSSCSCEEEEESCCCHHHHTTT-------CSSCEEEEEESSTTTT
T ss_pred HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHH-------CCCCEEEEECCCHHHH
T ss_conf 999999986553033347887778999999999735678789999567997788763-------6897899992778998
Q ss_pred HH-CCCCCEEECCC-CCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHH
Q ss_conf 32-28563575699-99889999999861299999824999999999991999157999986616999999999999984
Q 000802 333 KL-HRVRKVYKLEA-LTYDEAFRLLCLKAFDTHKPFEEYVELAESVVKYASGLPLALKVLGSFLFGRAVHEWTSALERIK 410 (1278)
Q Consensus 333 ~~-~~~~~~~~l~~-L~~~ea~~Lf~~~af~~~~~~~~~~~~~~~i~~~~~g~PLal~~lg~~L~~~~~~~w~~~l~~l~ 410 (1278)
.. .+....++++. |+++|+++||...++... +++.+.+++|+++|+|+||||+++|+.|+.+. .+|+..++++.
T Consensus 271 ~~~~~~~~~~~~~~~l~~~~a~~l~~~~~~~~~---~~~~~~~~~i~~~~~glPLal~~~~~~l~~~~-~~~~~~l~~l~ 346 (1249)
T 3sfz_A 271 DSVMGPKHVVPVESGLGREKGLEILSLFVNMKK---EDLPAEAHSIIKECKGSPLVVSLIGALLRDFP-NRWAYYLRQLQ 346 (1249)
T ss_dssp TTCCSCBCCEECCSSCCHHHHHHHHHHHHTSCS---TTCCTHHHHHHHHTTTCHHHHHHHHHHHHHSS-SCHHHHHHHHH
T ss_pred HHHCCCCEEEEECCCCCHHHHHHHHHHHHCCCH---HHCCHHHHHHHHHHCCCHHHHHHHHHHHHCCH-HHHHHHHHHHH
T ss_conf 763488437982588887889999998657981---34838899999984997799999999862480-57999999986
Q ss_pred CCC-----------CHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCC--CHHHHHHHHHHCCCCHHHHHHHHHHCCCCCE
Q ss_conf 399-----------812788997201388588899998761013899--8689999986579984677999984013605
Q 000802 411 RDP-----------EYEILSILQISFDGLKEVEKKIFLDVVCFFKGR--KRDYVSKILKSCDFDPVIGIAVLIEKSLLTV 477 (1278)
Q Consensus 411 ~~~-----------~~~i~~~l~~sy~~L~~~~k~~fl~~a~f~~~~--~~~~l~~~~~~~~~~~~~~i~~L~~~~Li~~ 477 (1278)
... ...+..++++||+.|++++|.||+++|+||.++ +.+.+..+|.+++...+..+..|++++|++.
T Consensus 347 ~~~~~~~~~~~~~~~~~~~~~l~~s~~~L~~~~~~~~~~l~~f~~~~~i~~~~~~~~~~~~~~~~~~~l~~L~~~sl~~~ 426 (1249)
T 3sfz_A 347 NKQFKRIRKSSSYDYEALDEAMSISVEMLREDIKDYYTDLSILQKDVKVPTKVLCVLWDLETEEVEDILQEFVNKSLLFC 426 (1249)
T ss_dssp SCCCCCSSCTTCTTHHHHHHHHHHHHHTSCTTTHHHHHHGGGSCTTCCEEHHHHHHHHTCCHHHHHHHHHHHHHTTSCEE
T ss_pred HHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCEECHHHHHHHHCCCHHHHHHHHHHHHHCCCEEE
T ss_conf 50443034655644677999999899867999999999728137997518999998858988899999999974463389
Q ss_pred ECCCE---EEECHHHHHHHHHHHHCC
Q ss_conf 08881---970078999999986404
Q 000802 478 DGANR---LWTHDLLQEMGRQIVRRQ 500 (1278)
Q Consensus 478 ~~~~~---~~mHdli~~~~~~i~~~~ 500 (1278)
...+. +.||+++|+++++...++
T Consensus 427 ~~~~~~~~~~~h~l~~~~~~~~~~~~ 452 (1249)
T 3sfz_A 427 NRNGKSFCYYLHDLQVDFLTEKNRSQ 452 (1249)
T ss_dssp EESSSSEEEECCHHHHHHHHHHTGGG
T ss_pred ECCCCCEEEEECHHHHHHHHHHHHHH
T ss_conf 63798118996689999987450678
No 3
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=1.00 E-value=1 Score=342.62 Aligned_cols=435 Identities=22% Similarity=0.204 Sum_probs=285.4
Q ss_pred HHHCCCCCCCEEEECCCCC----CC--CCCCCCCCCEEEEECCCCCCC-CCCC--CCCCCCHHHCCCCCCCCCCCC-C--
Q ss_conf 1012777545599838317----99--856676670199835999999-9961--112211113034333112123-5--
Q 000802 552 KAFSQMTNLRLLKISNVQL----PE--GLGYLSSKLRLLDWHGYPLKS-LPLN--LQLDKAVEFSMCYSCIEELWT-G-- 619 (1278)
Q Consensus 552 ~~f~~l~~Lr~L~l~~~~l----~~--~~~~l~~~Lr~L~l~~~~l~~-lp~~--~~~~~L~~L~l~~~~i~~l~~-~-- 619 (1278)
..|.++++|++|+++++.+ |. .+..+ .+|++|+++++.+.. .|.. ..+.+|++|+++++.+..... .
T Consensus 94 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l-~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~ 172 (768)
T 3rgz_A 94 SGFKCSASLTSLDLSRNSLSGPVTTLTSLGSC-SGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWV 172 (768)
T ss_dssp CCCCCCTTCCEEECCSSEEEEEGGGGGGGGGC-TTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSCCEEETHHHHH
T ss_pred HHHCCCCCCCEEECCCCCCCCCCCCHHHHHCC-CCCCEEECCCCCCCCCCCHHHHCCCCCCCEEECCCCCCCCCCCHHHH
T ss_conf 33245788998989898578707896787278-89998989688267747977856388999898979835885871556
Q ss_pred -CCCCCCCCEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCC-CCCCCC
Q ss_conf -666544431014698666558998899970499981999988658321158984099805999988679833-577754
Q 000802 620 -IKPLNMLKVMKLSHSENLIKTPNFTEVPNLEELDLEGCTRLRDIHPSLLLHNKLILLNLKGCTSLTTLPGEI-FMKSLK 697 (1278)
Q Consensus 620 -~~~l~~L~~L~L~~~~~~~~~~~~~~l~~L~~L~L~~c~~l~~l~~~l~~l~~L~~L~L~~~~~l~~lp~~~-~l~~L~ 697 (1278)
+..+++|++|+++++..... ..+..+++|++|++++|.....++. +..+++|++|++++|.....+|..+ .+++|+
T Consensus 173 ~~~~l~~L~~L~Ls~n~l~~~-~~~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~ 250 (768)
T 3rgz_A 173 LSDGCGELKHLAISGNKISGD-VDVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELK 250 (768)
T ss_dssp HTTCCTTCCEEECCSSEEESC-CBCTTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSCCCSCHHHHTTTCSSCC
T ss_pred HHCCCCCCCEEECCCCCCCCC-CCCCCCCCCCEEECCCCCCCCCCCC-CCCCCCCCEEECCCCCCCCCCCHHHHCCCCCC
T ss_conf 643589889898978803465-7845478689898928827887711-12699999897948858781657774488889
Q ss_pred EEEEECCCCCCCCCCCCCCCCCCHHHCCCCCCCC-CCCCCCCCC-CCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 9994088788857765586111101114676664-444111699-99639996477888986301213744553222676
Q 000802 698 TLVLSGCLKLRKFPRVAGSMECLRELLLDETDIK-EIPRSIGHL-SGLVQLTLKGCQNLSSLPVTISSLKRLRNLELSGC 775 (1278)
Q Consensus 698 ~L~Ls~~~~~~~lp~~~~~l~~L~~L~l~~~~l~-~lp~~l~~l-~~L~~L~L~~~~~l~~lp~~l~~l~~L~~L~Ls~~ 775 (1278)
+|++++|...+.+|.. .+++|+.|++.+|.+. .+|..+... ++|+.|++++|...+.+|..++.+++|+.|++++|
T Consensus 251 ~L~Ls~n~l~~~~~~~--~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n 328 (768)
T 3rgz_A 251 LLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSN 328 (768)
T ss_dssp EEECCSSCCEESCCCC--CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSS
T ss_pred EEECCCCCCCCCCCCC--CCCCCCEEECCCCCCCCCCCHHHHHHCCCCCEEECCCCCCCCCCCHHHHCCCCCCEEECCCC
T ss_conf 8989888665716724--36878989791785577258888844686889989689677842367755877667789788
Q ss_pred CCCCCCCCC-CCCCCCCCEEECCCCCCC-CCCCCCCCCC-CCCEEEECCCCCCCCCCCCCCC--CCCCCEEEECCCCCCH
Q ss_conf 678645300-059999878985588872-1371012799-9989950289899843222369--9998799840999963
Q 000802 776 SKLKNFPQI-VTSMEDLSELYLDGTSIT-EVPSSIELLT-GLELLTLKGCKNLTRLSSSING--LKSLKTLNLSGCSKLE 850 (1278)
Q Consensus 776 ~~l~~lp~~-~~~~~~L~~L~L~~~~l~-~lp~~l~~l~-~L~~L~L~~~~~l~~l~~~~~~--l~~L~~L~Ls~c~~l~ 850 (1278)
...+.+|.. +..+++|+.|++++|.+. .+|..+..++ +|+.|++++|.....++..+.. +++|+.|++++|....
T Consensus 329 ~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~ 408 (768)
T 3rgz_A 329 NFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTG 408 (768)
T ss_dssp EEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEE
T ss_pred CCCCCCCHHHHHCCCCCCEEECCCCCCCCCCCHHHHHHHCCCCEEECCCCCCCCCCCHHHHHCCCCCCCEEECCCCCCCC
T ss_conf 52573797887248888788484784376230989863227719986278747876766653324776189897784654
Q ss_pred HHHHHHCCCCCCCEEECCCCCCCCC-CCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
Q ss_conf 4465315788875552379845688-864002689865533788899999975457776445787787335898985289
Q 000802 851 NVLETLGQVESSEQLDKSGTTIKRP-SPNIFLMKNFKALSFCGCNGSPSSTSWHLDVPFNLMGKISCPAALMLPSLSEKL 929 (1278)
Q Consensus 851 ~~~~~l~~l~~L~~L~L~~n~i~~~-~~~~~~l~~L~~L~l~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~l~~lL~~L 929 (1278)
.+|..++.+++|+.|++++|.+.+. +..+..+++|+.|.+.+|......+ ..+..++++ +.|
T Consensus 409 ~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p----------------~~~~~l~~L-~~L 471 (768)
T 3rgz_A 409 KIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIP----------------QELMYVKTL-ETL 471 (768)
T ss_dssp ECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCC----------------GGGGGCTTC-CEE
T ss_pred CCCHHHHCCCCCCEEECCCCCCCCCCCHHHHCCCCCCEEECCCCCCCCCCC----------------HHHCCCCCC-EEE
T ss_conf 248777568987989895884668546777449988989897881547189----------------788287773-299
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCEECCCCCCCC-CCCHHHCCCCCCCEEECCCCCCCCCCCCC---CCCCCEEEECCCCC
Q ss_conf 821788999986555688788757508998673-24310007898898505677577738999---99975797518765
Q 000802 930 DLSDCCLGEGAIPTDIGNLCLLKELCLSGNNFV-TLPASINSLLNLEELKLEDCKRLQSLPQL---PPNVEKVRVNGCAS 1005 (1278)
Q Consensus 930 ~Ls~~~l~~~~lp~~l~~l~~L~~L~L~~n~l~-~lp~~i~~l~~L~~L~L~~c~~l~~lp~l---p~sL~~L~i~~C~s 1005 (1278)
++++|.+ .+.+|..+..+++|+.|+|++|.+. .+|..+..+++|+.|++++|+..+.+|.. .++|+.|++.+|.-
T Consensus 472 ~L~~N~l-~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l 550 (768)
T 3rgz_A 472 ILDFNDL-TGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLF 550 (768)
T ss_dssp ECCSSCC-CSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEE
T ss_pred EECCCCC-CCCCCHHHHCCCCCCEEECCCCCCCCCCCHHHHCCCCCCEEECCCCCCCCCCCHHHCCCCCCCEEECCCCCC
T ss_conf 9019951-375887881699899897539951896876885689999898978943374887770889899898988846
Q ss_pred CCCC
Q ss_conf 2022
Q 000802 1006 LVTL 1009 (1278)
Q Consensus 1006 L~~l 1009 (1278)
...+
T Consensus 551 ~g~i 554 (768)
T 3rgz_A 551 NGTI 554 (768)
T ss_dssp ESBC
T ss_pred CCCC
T ss_conf 8827
No 4
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=1.00 E-value=1 Score=342.13 Aligned_cols=418 Identities=20% Similarity=0.216 Sum_probs=194.8
Q ss_pred HHCCCCCCCEEEECCCCC----CCCCCCCCCCCEEEEECCCCCCCCCCC-----CCCCCCHHHCCCCCCCCCCCCCCCCC
Q ss_conf 012777545599838317----998566766701998359999999961-----11221111303433311212356665
Q 000802 553 AFSQMTNLRLLKISNVQL----PEGLGYLSSKLRLLDWHGYPLKSLPLN-----LQLDKAVEFSMCYSCIEELWTGIKPL 623 (1278)
Q Consensus 553 ~f~~l~~Lr~L~l~~~~l----~~~~~~l~~~Lr~L~l~~~~l~~lp~~-----~~~~~L~~L~l~~~~i~~l~~~~~~l 623 (1278)
.+.++++|++|+++++.+ |..+.....+|++|+++++.+...+.. ..+.+|++|+++++.+..... ...+
T Consensus 121 ~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~-~~~l 199 (768)
T 3rgz_A 121 SLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVD-VSRC 199 (768)
T ss_dssp GGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCB-CTTC
T ss_pred HHHCCCCCCEEECCCCCCCCCCCHHHHCCCCCCCEEECCCCCCCCCCCHHHHHHCCCCCCCEEECCCCCCCCCCC-CCCC
T ss_conf 872788999898968826774797785638899989897983588587155664358988989897880346578-4547
Q ss_pred CCCCEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEC
Q ss_conf 44431014698666558998899970499981999988658321158984099805999988679833577754999408
Q 000802 624 NMLKVMKLSHSENLIKTPNFTEVPNLEELDLEGCTRLRDIHPSLLLHNKLILLNLKGCTSLTTLPGEIFMKSLKTLVLSG 703 (1278)
Q Consensus 624 ~~L~~L~L~~~~~~~~~~~~~~l~~L~~L~L~~c~~l~~l~~~l~~l~~L~~L~L~~~~~l~~lp~~~~l~~L~~L~Ls~ 703 (1278)
++|++|++++|......+.+..+++|++|++++|.....++..+..+++|+.|++++|.....+|.. .+++|++|++++
T Consensus 200 ~~L~~L~Ls~n~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~-~l~~L~~L~L~~ 278 (768)
T 3rgz_A 200 VNLEFLDVSSNNFSTGIPFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL-PLKSLQYLSLAE 278 (768)
T ss_dssp TTCCEEECCSSCCCSCCCBCTTCCSCCEEECCSSCCCSCHHHHTTTCSSCCEEECCSSCCEESCCCC-CCTTCCEEECCS
T ss_pred CCCCEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHCCCCCCEEECCCCCCCCCCCCC-CCCCCCEEECCC
T ss_conf 8689898928827887711126999998979488587816577744888898989888665716724-368789897917
Q ss_pred CCCCCCCCCCCCCC-CCCHHHCCCCCCCC-CCCCCCCCCCCCCEEEEECCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCC
Q ss_conf 87888577655861-11101114676664-44411169999639996477888986301-21374455322267667864
Q 000802 704 CLKLRKFPRVAGSM-ECLRELLLDETDIK-EIPRSIGHLSGLVQLTLKGCQNLSSLPVT-ISSLKRLRNLELSGCSKLKN 780 (1278)
Q Consensus 704 ~~~~~~lp~~~~~l-~~L~~L~l~~~~l~-~lp~~l~~l~~L~~L~L~~~~~l~~lp~~-l~~l~~L~~L~Ls~~~~l~~ 780 (1278)
|...+.+|..+... ++|+.|++++|.+. .+|..++.+++|+.|++++|...+.+|.. ++.+++|+.|++++|...+.
T Consensus 279 n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~ 358 (768)
T 3rgz_A 279 NKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGE 358 (768)
T ss_dssp SEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEEC
T ss_pred CCCCCCCCHHHHHHCCCCCEEECCCCCCCCCCCHHHHCCCCCCEEECCCCCCCCCCCHHHHHCCCCCCEEECCCCCCCCC
T ss_conf 85577258888844686889989689677842367755877667789788525737978872488887884847843762
Q ss_pred CCCCCCCCC-CCCEEECCCCCCC-CCCCCCCC--CCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHH
Q ss_conf 530005999-9878985588872-13710127--9999899502898998432223699998799840999963446531
Q 000802 781 FPQIVTSME-DLSELYLDGTSIT-EVPSSIEL--LTGLELLTLKGCKNLTRLSSSINGLKSLKTLNLSGCSKLENVLETL 856 (1278)
Q Consensus 781 lp~~~~~~~-~L~~L~L~~~~l~-~lp~~l~~--l~~L~~L~L~~~~~l~~l~~~~~~l~~L~~L~Ls~c~~l~~~~~~l 856 (1278)
+|..+..++ +|+.|++++|.+. .+|..+.. +++|+.|++++|.....+|..+..+++|+.|++++|...+.+|..+
T Consensus 359 ~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l 438 (768)
T 3rgz_A 359 LPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSL 438 (768)
T ss_dssp CCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGG
T ss_pred CCHHHHHHHCCCCEEECCCCCCCCCCCHHHHHCCCCCCCEEECCCCCCCCCCCHHHHCCCCCCEEECCCCCCCCCCCHHH
T ss_conf 30989863227719986278747876766653324776189897784654248777568987989895884668546777
Q ss_pred CCCCCCCEEECCCCCCCCC-CCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCC
Q ss_conf 5788875552379845688-864002689865533788899999975457776445787787335898985289821788
Q 000802 857 GQVESSEQLDKSGTTIKRP-SPNIFLMKNFKALSFCGCNGSPSSTSWHLDVPFNLMGKISCPAALMLPSLSEKLDLSDCC 935 (1278)
Q Consensus 857 ~~l~~L~~L~L~~n~i~~~-~~~~~~l~~L~~L~l~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~l~~lL~~L~Ls~~~ 935 (1278)
+.+++|+.|++++|.+.+. +..+..+++|+.|.+++|...... +..+..+++| +.|+|++|.
T Consensus 439 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~----------------p~~l~~l~~L-~~L~L~~N~ 501 (768)
T 3rgz_A 439 GSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEI----------------PSGLSNCTNL-NWISLSNNR 501 (768)
T ss_dssp GGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCC----------------CGGGGGCTTC-CEEECCSSC
T ss_pred HCCCCCCEEECCCCCCCCCCCHHHCCCCCCEEEEECCCCCCCCC----------------CHHHHCCCCC-CEEECCCCC
T ss_conf 44998898989788154718978828777329990199513758----------------8788169989-989753995
Q ss_pred CCCCCCCCCCCCCCCCCEECCCCCCCC-CCCHHHCCCCCCCEEECCCCCCCCCCCC
Q ss_conf 999986555688788757508998673-2431000789889850567757773899
Q 000802 936 LGEGAIPTDIGNLCLLKELCLSGNNFV-TLPASINSLLNLEELKLEDCKRLQSLPQ 990 (1278)
Q Consensus 936 l~~~~lp~~l~~l~~L~~L~L~~n~l~-~lp~~i~~l~~L~~L~L~~c~~l~~lp~ 990 (1278)
+ .+.+|..++.+++|+.|+|++|.+. .+|..+..+++|+.|++++|+..+.+|.
T Consensus 502 l-~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~ 556 (768)
T 3rgz_A 502 L-TGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPA 556 (768)
T ss_dssp C-CSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCG
T ss_pred C-CCCCCHHHHCCCCCCEEECCCCCCCCCCCHHHCCCCCCCEEECCCCCCCCCCCH
T ss_conf 1-896876885689999898978943374887770889899898988846882795
No 5
>3jrn_A AT1G72930 protein; TIR domain arabidopsis thaliana, plant protein; 2.00A {Arabidopsis thaliana}
Probab=1.00 E-value=1 Score=327.03 Aligned_cols=171 Identities=47% Similarity=0.738 Sum_probs=162.4
Q ss_pred CCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHCEEEEEECCCCCCCHHHHH
Q ss_conf 99998602998242464654569999999981798245337644589887188999997511366773345456454699
Q 000802 8 NVSNEKYDVFLSFRGEDTRKSFTNHLYAALKNKGIYVFRDDKELEKGGSISPGLLKVIEESRISVIVLSKNYASSTWCLD 87 (1278)
Q Consensus 8 ~~~~~~~dvFis~~~~d~~~~~~~~l~~~L~~~g~~~~~d~~~~~~g~~~~~~~~~~i~~s~~~i~v~s~~~~~s~~c~~ 87 (1278)
++..++|||||||||+|+|++|++||+++|+++||++|+|++++++|+.|.++|.+||++|+++|+|||+||++|+||++
T Consensus 3 ss~~~~yDVFiSfrg~D~r~~Fv~~L~~~L~~~gi~~f~D~~~l~~G~~i~~~l~~aIe~Sri~IvV~S~ny~~S~WCl~ 82 (176)
T 3jrn_A 3 SHTATKYDVFLSFRGHDTRHNFISFLYKELVRRSIRTFKDDKELENGQRFSPELKSPIEVSRFAVVVVSENYAASSWCLD 82 (176)
T ss_dssp ----CCEEEEEEECHHHHTTTHHHHHHHHHHHTTCCEECCCC--------------CCTTEEEEEEEECTTTTTCHHHHH
T ss_pred CCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHCCEEEEEECCCCCCCHHHHH
T ss_conf 98898884999786746674899999999997899899876423577855799999999688899982488677716899
Q ss_pred HHHHHHHHHHCCCC-EEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH
Q ss_conf 99999996412894-68599973044101244135689899999861214769989999999984117875587620002
Q 000802 88 ELVKIVECKNRENQ-ILPIFYDVEPTVVRKQTVSFGEAFAKHVEAFRNNVEKVQKWRDALKVVANKSGWELKDGNESEFI 166 (1278)
Q Consensus 88 El~~~~~~~~~~~~-vipv~~~v~ps~vr~~~~~~~~~~~~~~~~~~~~~~~v~~wr~al~~~~~~~g~~~~~~~e~~~i 166 (1278)
||.+|++|.+.+++ |+||||+|+|++||+|+|+||++|++|+++ ...+++++||.||+++|+++||++. ++|+++|
T Consensus 83 EL~~i~~~~~~~~~~ViPIfy~V~ps~Vr~q~g~fg~af~~~~~~--~~~~~~~~Wr~AL~~va~~~G~~~~-~~e~~~i 159 (176)
T 3jrn_A 83 ELVTIMDFEKKGSITVMPIFYGVEPNHVRWQTGVLAEQFKKHASR--EDPEKVLKWRQALTNFAQLSGDCSG-DDDSKLV 159 (176)
T ss_dssp HHHHHHHHHHTTSCEEEEEECSSCHHHHHHTCTHHHHHHHHHHTT--SCHHHHHHHHHHHHHHTTSCCEECC-SCHHHHH
T ss_pred HHHHHHHHHCCCCCEEEEEEECCCHHHHHHCCCCHHHHHHHHHHC--CCHHHHHHHHHHHHHHHCCCCEECC-CCHHHHH
T ss_conf 999877654158877999984487888353157099999999820--4789999999999997466635258-8799999
Q ss_pred HHHHHCCCCCCCCCC
Q ss_conf 212202222234555
Q 000802 167 EAIVNVISSKIRTEL 181 (1278)
Q Consensus 167 ~~i~~~~~~~~~~~~ 181 (1278)
++||+.|..+++..+
T Consensus 160 ~~Iv~~v~~~l~~~~ 174 (176)
T 3jrn_A 160 DKIANEISNKKTIYA 174 (176)
T ss_dssp HHHHHHHHTTCC---
T ss_pred HHHHHHHHHHHCCCC
T ss_conf 999999999866789
No 6
>3ozi_A L6TR; plant TIR domain, plant protein; 2.30A {Linum usitatissimum}
Probab=1.00 E-value=1 Score=325.43 Aligned_cols=171 Identities=43% Similarity=0.758 Sum_probs=158.7
Q ss_pred CCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHCEEEEEECCCCCCCHHHH
Q ss_conf 99999860299824246465456999999998179824533764458988718899999751136677334545645469
Q 000802 7 QNVSNEKYDVFLSFRGEDTRKSFTNHLYAALKNKGIYVFRDDKELEKGGSISPGLLKVIEESRISVIVLSKNYASSTWCL 86 (1278)
Q Consensus 7 ~~~~~~~~dvFis~~~~d~~~~~~~~l~~~L~~~g~~~~~d~~~~~~g~~~~~~~~~~i~~s~~~i~v~s~~~~~s~~c~ 86 (1278)
++.+.++|||||||||+|+|++|++||+.+|+++||.+|+|++++++|+.|.++|.+||++|+++|+|||++|++|.||+
T Consensus 29 ~~~~~~~yDVFISfrg~D~r~~Fv~~L~~aL~~~GI~~f~D~~el~~G~~I~~~l~~aIe~Sri~IvV~S~nYa~S~WCl 108 (204)
T 3ozi_A 29 GSFPSVEYEVFLSFRGPDTREQFTDFLYQSLRRYKIHTFRDDDELLKGKEIGPNLLRAIDQSKIYVPIISSGYADSKWCL 108 (204)
T ss_dssp -----CCCCEEEEECHHHHTTTHHHHHHHHHHHTTCCEEEEETTTCCGGGTTTTHHHHHHHCSEEEEEECTTGGGCHHHH
T ss_pred CCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHCCEEEEEEECCCCCCCHHH
T ss_conf 77888577499965364777879999999999789958984876678770479999999848476688775532574789
Q ss_pred HHHHHHHHHHHC-CCC-EEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCC-CCCC
Q ss_conf 999999996412-894-6859997304410124413568989999986121476998999999998411787558-7620
Q 000802 87 DELVKIVECKNR-ENQ-ILPIFYDVEPTVVRKQTVSFGEAFAKHVEAFRNNVEKVQKWRDALKVVANKSGWELKD-GNES 163 (1278)
Q Consensus 87 ~El~~~~~~~~~-~~~-vipv~~~v~ps~vr~~~~~~~~~~~~~~~~~~~~~~~v~~wr~al~~~~~~~g~~~~~-~~e~ 163 (1278)
+||.+|++|.+. +++ |+||||+|+|++||+|+|+||++|++|++++. .+++++||.||+++|+++||++.+ ..|+
T Consensus 109 ~EL~~I~e~~~~~~~~~ViPIFY~VdPs~Vr~q~g~fg~af~~~~~~~~--~~~v~~Wr~AL~~va~lsG~~~~~~~~e~ 186 (204)
T 3ozi_A 109 MELAEIVRRQEEDPRRIILPIFYMVDPSDVRHQTGCYKKAFRKHANKFD--GQTIQNWKDALKKVGDLKGWHIGKNDKQG 186 (204)
T ss_dssp HHHHHHHHHHHHCTTSEECCEEESSCHHHHHHTCTTHHHHHHHHTTTSC--HHHHHHHHHHHHHHHTSCBEEECTTSCHH
T ss_pred HHHHHHHHHHHHCCCEEEEEEEEECCHHHHHHCCCCHHHHHHHHHHHHC--HHHHHHHHHHHHHHHCCCCEECCCCCCHH
T ss_conf 9999999988751770357799606889977412419999999998617--88999999999998466756328999899
Q ss_pred HHHHHHHHCCCCCCCC
Q ss_conf 0022122022222345
Q 000802 164 EFIEAIVNVISSKIRT 179 (1278)
Q Consensus 164 ~~i~~i~~~~~~~~~~ 179 (1278)
+++++|+.+|+.+++.
T Consensus 187 ~~i~~Iv~di~~kl~~ 202 (204)
T 3ozi_A 187 AIADKVSADIWSHISK 202 (204)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCC
T ss_conf 9999999999987334
No 7
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A*
Probab=1.00 E-value=1 Score=313.28 Aligned_cols=282 Identities=18% Similarity=0.147 Sum_probs=217.5
Q ss_pred CCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHH--HHHCCCCCCEEEEECHHHCCCCCCHHHHHHH
Q ss_conf 88633249999999986304899806999980499824589999998--8504655417824010010267877999999
Q 000802 184 PKELVGIESRLEKLKVHMDTRSNDVRMIGIWGMGGLGKTTLARVVYD--LISHEFDGSSFLADVREKCDKEGSVISLQKQ 261 (1278)
Q Consensus 184 ~~~~vGr~~~~~~l~~~L~~~~~~~~vv~I~G~gGiGKTtLa~~v~~--~~~~~f~~~~~~~~~~~~~~~~~~~~~l~~~ 261 (1278)
.+..|||+.++++|..+|... ++.++|+|+||||+||||||+++|+ +++.+|+..+||.++++... ...+...
T Consensus 127 tk~~VGRe~eLeeL~elL~~~-d~~RVV~IvGmGGIGKTTLAk~Vy~d~rV~~~Fd~gV~WVsVs~~~d----~~~IL~~ 201 (1221)
T 1vt4_I 127 AKYNVSRLQPYLKLRQALLEL-RPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNS----PETVLEM 201 (1221)
T ss_dssp CCSCCCCHHHHHHHHHHHHHC-CSSCEEEECCSTTSSHHHHHHHHHHHCHHHHHHSSCEEEEECCCSSS----HHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHCC-CCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC----HHHHHHH
T ss_conf 787789289999999997435-89718999769996679999999971498874899389998289999----9999999
Q ss_pred HHHH---HHCCCCCC-------CCCHHHHHHHHHHHH---CCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCEEEEEECC
Q ss_conf 9998---81787998-------545222189999998---1798249981899946566762699977999689999188
Q 000802 262 LLSD---LLKLADNS-------IRNVYDGINMLRIRL---RRKKVLVVIDDVAHPDHLRSLVGEPDWFGPGSQIIITTRN 328 (1278)
Q Consensus 262 ll~~---l~~~~~~~-------~~~~~~~~~~l~~~l---~~k~~LiVLDdv~~~~~~~~l~~~~~~~~~gs~iiiTTR~ 328 (1278)
++.. +....... ..+.....+.++..+ .++|+||||||||+.++|+.+ ++||+||||||+
T Consensus 202 Ll~lL~~i~~~~~~~~d~~~~ip~~leeL~e~Lr~lL~~l~~KRvLLVLDDVwd~eqLe~f-------~pGSRILVTTRd 274 (1221)
T 1vt4_I 202 LQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAF-------NLSCKILLTTRF 274 (1221)
T ss_dssp HHHHHHHHCSSSTTTSCCCSSHHHHHHHHHHHHHHHHHHSTTSSCEEEEESCCCHHHHHHH-------HSSCCEEEECSC
T ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHH-------CCCEEEEEECCC
T ss_conf 9999862272102200134679999999999999999850478879987186818999864-------798299994437
Q ss_pred HHHHHHCCCCCEEECC------CCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCC--CHH
Q ss_conf 3445322856357569------99988999999986129999982499999999999199915799998661699--999
Q 000802 329 EHLLKLHRVRKVYKLE------ALTYDEAFRLLCLKAFDTHKPFEEYVELAESVVKYASGLPLALKVLGSFLFGR--AVH 400 (1278)
Q Consensus 329 ~~v~~~~~~~~~~~l~------~L~~~ea~~Lf~~~af~~~~~~~~~~~~~~~i~~~~~g~PLal~~lg~~L~~~--~~~ 400 (1278)
+.++..+....+|+++ +|+.+||++||+++. +.. . .++..++ |+|+||||+++|+.|+++ +..
T Consensus 275 ~~Va~~l~g~~vy~LeL~d~dL~LS~eEA~eLF~~~~-g~~--~---eeL~~eI---CgGLPLALkLaGs~Lr~k~~s~e 345 (1221)
T 1vt4_I 275 KQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYL-DCR--P---QDLPREV---LTTNPRRLSIIAESIRDGLATWD 345 (1221)
T ss_dssp SHHHHHHHHHSSCEEEECSSSSCCCHHHHHHHHHHHH-CCC--T---TTHHHHH---CCCCHHHHHHHHHHHHHSCSSHH
T ss_pred HHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHC-CCC--H---HHHHHHH---HCCCHHHHHHHHHHHHCCCCCHH
T ss_conf 3799866897089946865568969999999999974-998--8---9999999---69899999999999848899799
Q ss_pred HHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHH-HHHHHHHHCCCCCCC--HHHHHHHHHHCCC-CHHHHHHHHHHCCCCC
Q ss_conf 99999999843998127889972013885888-999987610138998--6899999865799-8467799998401360
Q 000802 401 EWTSALERIKRDPEYEILSILQISFDGLKEVE-KKIFLDVVCFFKGRK--RDYVSKILKSCDF-DPVIGIAVLIEKSLLT 476 (1278)
Q Consensus 401 ~w~~~l~~l~~~~~~~i~~~l~~sy~~L~~~~-k~~fl~~a~f~~~~~--~~~l~~~~~~~~~-~~~~~i~~L~~~~Li~ 476 (1278)
+|+.. ....+..+++.||+.|++++ |.||+++|+||++.. .+.+..+|.+.+. ++...++.|+++||++
T Consensus 346 eW~~~-------~~~~I~aaLelSYd~Lp~eelK~cFL~LAIFPed~~I~~elLa~LW~aeGeedAe~~L~eLvdRSLLq 418 (1221)
T 1vt4_I 346 NWKHV-------NCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVE 418 (1221)
T ss_dssp HHHHC-------SCHHHHHHHHHHHHHSCTTHHHHHHHHTTSSCTTSCEEHHHHHHHHCSSCSHHHHHHHHHHHTSSSSS
T ss_pred HHHCC-------CHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCEE
T ss_conf 98669-------86189999999998488999999999971779999877999998766778899999999999619889
Q ss_pred EEC-CCEEEECHHHHHHH
Q ss_conf 508-88197007899999
Q 000802 477 VDG-ANRLWTHDLLQEMG 493 (1278)
Q Consensus 477 ~~~-~~~~~mHdli~~~~ 493 (1278)
.+. ..+++|||+++++.
T Consensus 419 ~d~~~~rYrMHDLllELr 436 (1221)
T 1vt4_I 419 KQPKESTISIPSIYLELK 436 (1221)
T ss_dssp BCSSSSEEBCCCHHHHHH
T ss_pred EECCCCEEEEHHHHHHHH
T ss_conf 868999898609999985
No 8
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=1.00 E-value=1 Score=312.75 Aligned_cols=423 Identities=21% Similarity=0.218 Sum_probs=265.5
Q ss_pred CCCCCHHHCCCCCCCEEEECCCCC----CCCCCCCCCCCEEEEECCCCCCCCC-CCC-CCCCCHHHCCCCCCCCCC-CCC
Q ss_conf 234801012777545599838317----9985667667019983599999999-611-122111130343331121-235
Q 000802 547 LNASAKAFSQMTNLRLLKISNVQL----PEGLGYLSSKLRLLDWHGYPLKSLP-LNL-QLDKAVEFSMCYSCIEEL-WTG 619 (1278)
Q Consensus 547 ~~~~~~~f~~l~~Lr~L~l~~~~l----~~~~~~l~~~Lr~L~l~~~~l~~lp-~~~-~~~~L~~L~l~~~~i~~l-~~~ 619 (1278)
....+..|.++++|++|+++++.+ |..+..+ .+|++|+++++.+..++ ..+ .+.+|++|++.++.+..+ +..
T Consensus 46 ~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l-~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~ 124 (606)
T 3t6q_A 46 PTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQ-HRLDTLVLTANPLIFMAETALSGPKALKHLFFIQTGISSIDFIP 124 (606)
T ss_dssp SEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTC-TTCCEEECTTCCCSEECTTTTSSCTTCCEEECTTSCCSCGGGSC
T ss_pred CCCCHHHHCCCCCCEEEECCCCCCCEECHHHCCCC-CCCCEEECCCCCCCCCCHHHHCCCCCCCEEECCCCCCCCCCCCH
T ss_conf 71796672567665289788983552485113684-33676448898565458655234421537652126766578101
Q ss_pred CCCCCCCCEECCCCCCCCC-CCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCE--EEECCCCCCCCCCCCCCCCCCC
Q ss_conf 6665444310146986665-589988999704999819999886583211589840--9980599998867983357775
Q 000802 620 IKPLNMLKVMKLSHSENLI-KTPNFTEVPNLEELDLEGCTRLRDIHPSLLLHNKLI--LLNLKGCTSLTTLPGEIFMKSL 696 (1278)
Q Consensus 620 ~~~l~~L~~L~L~~~~~~~-~~~~~~~l~~L~~L~L~~c~~l~~l~~~l~~l~~L~--~L~L~~~~~l~~lp~~~~l~~L 696 (1278)
+..+++|++|+++++.... ..+.+..+++|++|++++|......+..+..+++|+ .|++++|......|..+....|
T Consensus 125 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l~~~~~~~~~~~~L 204 (606)
T 3t6q_A 125 LHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAGIEPGAFDSAVF 204 (606)
T ss_dssp CTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCCCEECTTTTTTCEE
T ss_pred HCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHCCC
T ss_conf 22378223898879834114765456876568777656844554965633221564038966798147548667300100
Q ss_pred CEEEEECCCCCCCC--------------------------CCCCCCCC--CCHHHCCCCCCCCCCCCC-CCCCCCCCEEE
Q ss_conf 49994088788857--------------------------76558611--110111467666444411-16999963999
Q 000802 697 KTLVLSGCLKLRKF--------------------------PRVAGSME--CLRELLLDETDIKEIPRS-IGHLSGLVQLT 747 (1278)
Q Consensus 697 ~~L~Ls~~~~~~~l--------------------------p~~~~~l~--~L~~L~l~~~~l~~lp~~-l~~l~~L~~L~ 747 (1278)
+.|++++|...... +..+..+. .++.|++.++.+..++.. +..+++|+.|+
T Consensus 205 ~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 284 (606)
T 3t6q_A 205 QSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELD 284 (606)
T ss_dssp EEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCCTTTTTTCTTCSEEE
T ss_pred CCCCCCCCHHHHHHHHHCCCCCHHHEECHHHCCCCCCCCCHHHHCHHHCCCEEEEEEECCCCCCCCHHHHCCCCCCCEEE
T ss_conf 13556772667777651335644220020110264122686674303207505999445765855777744566788895
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCC-CCCC-CCCCCCCCCEEEECCCCCC
Q ss_conf 6477888986301213744553222676678645300059999878985588872-1371-0127999989950289899
Q 000802 748 LKGCQNLSSLPVTISSLKRLRNLELSGCSKLKNFPQIVTSMEDLSELYLDGTSIT-EVPS-SIELLTGLELLTLKGCKNL 825 (1278)
Q Consensus 748 L~~~~~l~~lp~~l~~l~~L~~L~Ls~~~~l~~lp~~~~~~~~L~~L~L~~~~l~-~lp~-~l~~l~~L~~L~L~~~~~l 825 (1278)
+++|. +..+|..+..+++|+.|++++|......+..+..+++|+.|+++++.+. .++. .+..+++|+.|++++|...
T Consensus 285 l~~n~-l~~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~ 363 (606)
T 3t6q_A 285 LTATH-LSELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIE 363 (606)
T ss_dssp CTTSC-CSCCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCC
T ss_pred CCCCC-CCCCCHHHCCCCCCCEEECCCCCCCCCCHHHHHCCCCCCEEECCCCCCCCCCCHHHHHCCCCCCEEECCCCCCC
T ss_conf 62882-67778214165468889771687686760233015768988898997444346245506675898878899666
Q ss_pred CCC--CCCCCCCCCCCEEEECCCCCCHHHHHHHCCCCCCCEEECCCCCCCCCCC--CCCCCCCCCEEECCCCCCCCCCCC
Q ss_conf 843--2223699998799840999963446531578887555237984568886--400268986553378889999997
Q 000802 826 TRL--SSSINGLKSLKTLNLSGCSKLENVLETLGQVESSEQLDKSGTTIKRPSP--NIFLMKNFKALSFCGCNGSPSSTS 901 (1278)
Q Consensus 826 ~~l--~~~~~~l~~L~~L~Ls~c~~l~~~~~~l~~l~~L~~L~L~~n~i~~~~~--~~~~l~~L~~L~l~~~~~~~~~~~ 901 (1278)
... +..+..+++|+.|++++|......+..+..+++|+.|++++|.+.+..+ .+..+++|+.|.+++|......
T Consensus 364 ~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~-- 441 (606)
T 3t6q_A 364 TSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISS-- 441 (606)
T ss_dssp EEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTC--
T ss_pred CCCCCCHHCCCCCCCCEEECCCCCCCCCCHHHHCCCCCCCEEECCCCCCCCCCCCHHHHCCCCCCEEECCCCCCCCCC--
T ss_conf 456752210567888989898996775788873477457768788886777565212417655888989898557768--
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCC--CCCCCCCCCCCEECCCCCCCCCC-CHHHCCCCCCCEEE
Q ss_conf 5457776445787787335898985289821788999986--55568878875750899867324-31000789889850
Q 000802 902 WHLDVPFNLMGKISCPAALMLPSLSEKLDLSDCCLGEGAI--PTDIGNLCLLKELCLSGNNFVTL-PASINSLLNLEELK 978 (1278)
Q Consensus 902 ~~l~~~~n~~~~~~~~~~~~l~~lL~~L~Ls~~~l~~~~l--p~~l~~l~~L~~L~L~~n~l~~l-p~~i~~l~~L~~L~ 978 (1278)
+..+..++++ +.|++++|.+....+ +..+..+++|+.|++++|.++.+ |..+..+++|+.|+
T Consensus 442 --------------~~~~~~l~~L-~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 506 (606)
T 3t6q_A 442 --------------EQLFDGLPAL-QHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVD 506 (606)
T ss_dssp --------------TTTTTTCTTC-CEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred --------------HHHHHCCCCC-CEEECCCCCCCCCCCCCCHHHCCCCCCCEEECCCCCCCCCCHHHHCCCCCCCEEE
T ss_conf --------------7787378878-8898989988854345431240488766887999966706864632656788898
Q ss_pred CCCCCCCCCC
Q ss_conf 5677577738
Q 000802 979 LEDCKRLQSL 988 (1278)
Q Consensus 979 L~~c~~l~~l 988 (1278)
+++|+.....
T Consensus 507 Ls~N~l~~~~ 516 (606)
T 3t6q_A 507 LSHNRLTSSS 516 (606)
T ss_dssp CCSSCCCGGG
T ss_pred CCCCCCCCCC
T ss_conf 9898068689
No 9
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=1.00 E-value=1 Score=308.07 Aligned_cols=123 Identities=11% Similarity=0.085 Sum_probs=52.0
Q ss_pred CCCCEEEECCCCC---C-CCCCCCCCCCEEEEECCCCCCCCCC-CC-CCCCCHHHCCCCCCCCCC-CCCCCCCCCCCEEC
Q ss_conf 7545599838317---9-9856676670199835999999996-11-122111130343331121-23566654443101
Q 000802 558 TNLRLLKISNVQL---P-EGLGYLSSKLRLLDWHGYPLKSLPL-NL-QLDKAVEFSMCYSCIEEL-WTGIKPLNMLKVMK 630 (1278)
Q Consensus 558 ~~Lr~L~l~~~~l---~-~~~~~l~~~Lr~L~l~~~~l~~lp~-~~-~~~~L~~L~l~~~~i~~l-~~~~~~l~~L~~L~ 630 (1278)
++++.|+++++.+ + ..+..+ .+|++|+++++.+..++. .| .+.+|++|+++++.+..+ +..+..+++|++|+
T Consensus 32 ~~l~~L~Ls~n~l~~~~~~~~~~l-~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 110 (606)
T 3vq2_A 32 SSTKNIDLSFNPLKILKSYSFSNF-SELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLV 110 (606)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTC-TTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEE
T ss_pred CCCCEEECCCCCCCEECHHHCCCC-CCCCEEECCCCCCCCCCHHHHHCHHHCCEEECCCCCCCCCCHHHCCCCCCCCEEE
T ss_conf 876788788897577375455577-6674886887736643977730601068867879856304852207865378887
Q ss_pred CCCCCCCCCC-CCCCCCCCCCEEEECCCCCCC-CCCCCCCCCCCCEEEECCCC
Q ss_conf 4698666558-998899970499981999988-65832115898409980599
Q 000802 631 LSHSENLIKT-PNFTEVPNLEELDLEGCTRLR-DIHPSLLLHNKLILLNLKGC 681 (1278)
Q Consensus 631 L~~~~~~~~~-~~~~~l~~L~~L~L~~c~~l~-~l~~~l~~l~~L~~L~L~~~ 681 (1278)
+++|...... ..+..+++|++|++++|.... .+|..+..+++|++|++++|
T Consensus 111 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n 163 (606)
T 3vq2_A 111 AVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYN 163 (606)
T ss_dssp CTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSS
T ss_pred CCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCEECHHHHHHCCCCCEEECCCC
T ss_conf 03775554451134898877989687885232530686732677778876688
No 10
>1z6t_A APAF-1, apoptotic protease activating factor 1; caspase activation, ADP, nucleotide binding, CARD, apoptosis; HET: ADP; 2.21A {Homo sapiens}
Probab=1.00 E-value=1 Score=306.09 Aligned_cols=303 Identities=21% Similarity=0.265 Sum_probs=231.3
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHH---HCCCCCCEEEEECHHHCCCCCCHHH
Q ss_conf 5788863324999999998630489980699998049982458999999885---0465541782401001026787799
Q 000802 181 LKIPKELVGIESRLEKLKVHMDTRSNDVRMIGIWGMGGLGKTTLARVVYDLI---SHEFDGSSFLADVREKCDKEGSVIS 257 (1278)
Q Consensus 181 ~~~~~~~vGr~~~~~~l~~~L~~~~~~~~vv~I~G~gGiGKTtLa~~v~~~~---~~~f~~~~~~~~~~~~~~~~~~~~~ 257 (1278)
+..+..||||+.++++|..++....++.++|+|+||||+||||||++++++. +..|+..+||..+..... .. +..
T Consensus 120 P~~~~~~vGR~~~l~~L~~~L~~~~~~~~~v~I~G~~GiGKTtLa~~~~~~~~~~~~~f~~~v~wv~~~~~~~-~~-~~~ 197 (591)
T 1z6t_A 120 PQRPVVFVTRKKLVNAIQQKLSKLKGEPGWVTIHGMAGCGKSVLAAEAVRDHSLLEGCFPGGVHWVSVGKQDK-SG-LLM 197 (591)
T ss_dssp CCCCSSCCCCHHHHHHHHHHHTTSTTSCEEEEEECCTTSSHHHHHHHHHCCHHHHHHHCTTCEEEEEEESCCH-HH-HHH
T ss_pred CCCCCEECCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHCHHHHHHHCCCCEEEEECCCCCH-HH-HHH
T ss_conf 9998714052999999999986036888469997699898899999998355688852899659997787766-88-999
Q ss_pred HHHHHHHHHHCCC---CCCCCCHHHHHHHHHHHHCC--CCCEEEEECCCCHHHHHHHHCCCCCCCCCCEEEEEECCHHHH
Q ss_conf 9999999881787---99854522218999999817--982499818999465667626999779996899991883445
Q 000802 258 LQKQLLSDLLKLA---DNSIRNVYDGINMLRIRLRR--KKVLVVIDDVAHPDHLRSLVGEPDWFGPGSQIIITTRNEHLL 332 (1278)
Q Consensus 258 l~~~ll~~l~~~~---~~~~~~~~~~~~~l~~~l~~--k~~LiVLDdv~~~~~~~~l~~~~~~~~~gs~iiiTTR~~~v~ 332 (1278)
....+...+.... .....+.......++..+.+ +++||||||||+..+++.+ +++++||||||+..++
T Consensus 198 ~l~~l~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~LLVLDdv~~~~~l~~l-------~~~~~ilvTsR~~~~~ 270 (591)
T 1z6t_A 198 KLQNLCTRLDQDESFSQRLPLNIEEAKDRLRILMLRKHPRSLLILDDVWDSWVLKAF-------DSQCQILLTTRDKSVT 270 (591)
T ss_dssp HHHHHHHHHCSSCCSCSSCCCSHHHHHHHHHHHHHHTCTTCEEEEEEECCHHHHHTT-------CSSCEEEEEESCGGGG
T ss_pred HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHH-------CCCCEEEEECCCCHHH
T ss_conf 999999985035565567998899999999999706799869998589987999876-------3798699989881777
Q ss_pred HHCCCCCEEEC---CCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHH
Q ss_conf 32285635756---999988999999986129999982499999999999199915799998661699999999999998
Q 000802 333 KLHRVRKVYKL---EALTYDEAFRLLCLKAFDTHKPFEEYVELAESVVKYASGLPLALKVLGSFLFGRAVHEWTSALERI 409 (1278)
Q Consensus 333 ~~~~~~~~~~l---~~L~~~ea~~Lf~~~af~~~~~~~~~~~~~~~i~~~~~g~PLal~~lg~~L~~~~~~~w~~~l~~l 409 (1278)
..+. ...+++ ++|+.+|+++||...++.. .....+.+.+|+++|+|+|||++++|+.+++.. .+|...++.+
T Consensus 271 ~~~~-~~~~~v~~l~~L~~~ea~~L~~~~~~~~---~~~~~~~~~~i~~~~~G~PLal~~~a~~l~~~~-~~w~~~l~~l 345 (591)
T 1z6t_A 271 DSVM-GPKYVVPVESSLGKEKGLEILSLFVNMK---KADLPEQAHSIIKECKGSPLVVSLIGALLRDFP-NRWEYYLKQL 345 (591)
T ss_dssp TTCC-SCEEEEECCSSCCHHHHHHHHHHHHTSC---GGGSCTHHHHHHHHHTTCHHHHHHHHHHHHHST-TCHHHHHHHH
T ss_pred HHCC-CCCEEEECCCCCCHHHHHHHHHHHHCCC---CCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCC-HHHHHHHHHH
T ss_conf 7348-9826861588999899999999871898---310459999999995898379999999984484-3599999999
Q ss_pred HCCC-----------CHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCC--HHHHHHHHHHCCCCHHHHHHHHHHCCCCC
Q ss_conf 4399-----------8127889972013885888999987610138998--68999998657998467799998401360
Q 000802 410 KRDP-----------EYEILSILQISFDGLKEVEKKIFLDVVCFFKGRK--RDYVSKILKSCDFDPVIGIAVLIEKSLLT 476 (1278)
Q Consensus 410 ~~~~-----------~~~i~~~l~~sy~~L~~~~k~~fl~~a~f~~~~~--~~~l~~~~~~~~~~~~~~i~~L~~~~Li~ 476 (1278)
.... ...+..++..||+.|+++.|.||+++|+||.+.. .+.+..+|...+......+..|++++|+.
T Consensus 346 ~~~~~~~~~~~~~~~~~~l~~~l~~s~~~L~~~~~~~l~~la~f~~~~~i~~~~l~~l~~~~~~~~~~~l~~L~~~~Ll~ 425 (591)
T 1z6t_A 346 QNKQFKRIRKSSSYDYEALDEAMSISVEMLREDIKDYYTDLSILQKDVKVPTKVLCILWDMETEEVEDILQEFVNKSLLF 425 (591)
T ss_dssp HSCCCCCSSCCCSSCCHHHHHHHHHHHHTSCTTTHHHHHHGGGCCTTCCEEHHHHHHHHTCCHHHHHHHHHHHHHTTSSE
T ss_pred HHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEE
T ss_conf 88689876511465437899999999986899999999974556799850899999996658899999999998595868
Q ss_pred EECC---CEEEECHHHHHHHHHHH
Q ss_conf 5088---81970078999999986
Q 000802 477 VDGA---NRLWTHDLLQEMGRQIV 497 (1278)
Q Consensus 477 ~~~~---~~~~mHdli~~~~~~i~ 497 (1278)
.... .++.||+++|+++++..
T Consensus 426 ~~~~~~~~~~~~H~lv~~~~~~~~ 449 (591)
T 1z6t_A 426 CDRNGKSFRYYLHDLQVDFLTEKN 449 (591)
T ss_dssp EEEETTEEEEECCHHHHHHHHHHT
T ss_pred EECCCCCCEEEECHHHHHHHHHHH
T ss_conf 854898567997689999998653
Done!