Query 000805
Match_columns 1276
No_of_seqs 511 out of 3727
Neff 7.2
Searched_HMMs 46136
Date Tue Apr 2 00:00:36 2013
Command hhsearch -i /work/01045/syshi/lefta3m/000805.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/leftcdd/000805hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02906 xanthine dehydrogenas 100.0 3E-256 7E-261 2488.6 133.2 1248 2-1265 49-1317(1319)
2 TIGR02969 mam_aldehyde_ox alde 100.0 7E-252 2E-256 2444.0 128.7 1233 2-1275 69-1327(1330)
3 KOG0430 Xanthine dehydrogenase 100.0 3E-251 7E-256 2240.8 96.5 1167 2-1265 68-1255(1257)
4 PLN00192 aldehyde oxidase 100.0 6E-242 1E-246 2351.9 124.7 1185 2-1267 72-1339(1344)
5 PRK09800 putative hypoxanthine 100.0 7E-162 1E-166 1542.0 86.9 703 510-1259 169-955 (956)
6 TIGR03313 Se_sel_red_Mo probab 100.0 2E-160 5E-165 1529.8 85.7 702 510-1258 165-950 (951)
7 COG4631 XdhB Xanthine dehydrog 100.0 2E-161 4E-166 1348.7 51.7 735 511-1259 17-773 (781)
8 TIGR03311 Se_dep_Molyb_1 selen 100.0 7E-155 1E-159 1472.9 81.3 672 513-1254 162-847 (848)
9 TIGR02965 xanthine_xdhB xanthi 100.0 4E-154 8E-159 1459.9 80.1 734 513-1259 1-756 (758)
10 TIGR03194 4hydrxCoA_A 4-hydrox 100.0 9E-147 2E-151 1388.3 78.9 709 517-1257 1-746 (746)
11 PRK09970 xanthine dehydrogenas 100.0 1E-146 3E-151 1392.8 78.6 708 512-1259 2-755 (759)
12 TIGR03196 pucD xanthine dehydr 100.0 2E-145 4E-150 1377.7 76.3 713 512-1254 2-768 (768)
13 TIGR02416 CO_dehy_Mo_lg carbon 100.0 1E-144 2E-149 1376.0 76.7 703 521-1255 1-769 (770)
14 COG1529 CoxL Aerobic-type carb 100.0 2E-114 4E-119 1090.5 69.6 700 510-1258 3-730 (731)
15 PF02738 Ald_Xan_dh_C2: Molybd 100.0 3E-105 6E-110 989.7 50.0 524 653-1187 15-547 (547)
16 COG4630 XdhA Xanthine dehydrog 100.0 2E-91 4.4E-96 759.7 25.7 398 2-472 74-482 (493)
17 TIGR02963 xanthine_xdhA xanthi 100.0 9E-87 1.9E-91 797.2 43.5 389 2-467 66-466 (467)
18 PRK09971 xanthine dehydrogenas 100.0 4.5E-57 9.8E-62 514.0 31.3 280 178-472 6-287 (291)
19 TIGR03195 4hydrxCoA_B 4-hydrox 100.0 1.7E-53 3.8E-58 483.9 31.8 277 176-469 4-320 (321)
20 TIGR03199 pucC xanthine dehydr 100.0 4.1E-52 9E-57 467.7 29.5 261 182-462 1-263 (264)
21 COG1319 CoxM Aerobic-type carb 100.0 7.2E-51 1.6E-55 450.8 26.3 278 176-471 3-282 (284)
22 PRK09799 putative oxidoreducta 100.0 8.6E-48 1.9E-52 429.3 27.1 250 178-471 4-254 (258)
23 TIGR03312 Se_sel_red_FAD proba 100.0 1.6E-47 3.4E-52 426.5 26.4 251 178-472 3-254 (257)
24 PF00941 FAD_binding_5: FAD bi 100.0 2.7E-40 5.9E-45 347.8 14.5 170 176-355 2-171 (171)
25 TIGR03193 4hydroxCoAred 4-hydr 100.0 5.2E-29 1.1E-33 249.1 8.3 82 2-84 57-147 (148)
26 TIGR03198 pucE xanthine dehydr 100.0 5.6E-29 1.2E-33 251.3 8.3 84 2-86 59-150 (151)
27 PF01315 Ald_Xan_dh_C: Aldehyd 100.0 1.4E-28 3.1E-33 239.8 8.9 107 527-634 1-111 (111)
28 PRK09908 xanthine dehydrogenas 99.9 2.6E-28 5.6E-33 246.5 8.5 85 2-86 63-157 (159)
29 PF01799 Fer2_2: [2Fe-2S] bind 99.9 6.3E-28 1.4E-32 215.0 6.7 68 15-83 8-75 (75)
30 COG2080 CoxS Aerobic-type carb 99.9 3.5E-27 7.7E-32 235.0 7.4 84 2-86 59-152 (156)
31 PRK11433 aldehyde oxidoreducta 99.9 6.5E-27 1.4E-31 247.5 9.0 84 2-86 107-214 (217)
32 PF03450 CO_deh_flav_C: CO deh 99.7 1.4E-17 3.1E-22 161.0 12.7 103 362-468 1-103 (103)
33 COG1529 CoxL Aerobic-type carb 99.5 3E-15 6.4E-20 190.6 6.2 473 507-1042 179-711 (731)
34 PRK14653 UDP-N-acetylenolpyruv 97.0 0.0038 8.3E-08 71.8 10.9 159 167-355 26-191 (297)
35 PRK14652 UDP-N-acetylenolpyruv 97.0 0.0038 8.2E-08 72.2 10.6 158 168-354 29-192 (302)
36 TIGR00179 murB UDP-N-acetyleno 96.5 0.013 2.8E-07 67.4 10.5 160 169-354 7-172 (284)
37 PRK13905 murB UDP-N-acetylenol 96.5 0.012 2.7E-07 68.1 10.3 161 168-356 24-191 (298)
38 PRK13906 murB UDP-N-acetylenol 96.2 0.027 5.9E-07 65.4 11.3 152 176-355 37-195 (307)
39 PRK14650 UDP-N-acetylenolpyruv 96.2 0.032 7E-07 64.2 11.6 158 167-355 25-192 (302)
40 PF01565 FAD_binding_4: FAD bi 95.9 0.018 3.8E-07 58.7 7.0 102 178-300 3-109 (139)
41 COG0277 GlcD FAD/FMN-containin 95.7 0.018 3.9E-07 70.9 6.8 103 177-299 33-139 (459)
42 PRK12436 UDP-N-acetylenolpyruv 95.6 0.071 1.5E-06 61.9 11.1 152 176-355 37-195 (305)
43 PRK11183 D-lactate dehydrogena 95.2 0.044 9.6E-07 67.0 7.9 106 177-299 40-152 (564)
44 TIGR00387 glcD glycolate oxida 94.8 0.14 3.1E-06 62.2 11.0 100 180-298 2-105 (413)
45 TIGR01676 GLDHase galactonolac 94.7 0.052 1.1E-06 67.1 6.9 101 177-299 63-167 (541)
46 PRK00046 murB UDP-N-acetylenol 94.7 0.19 4.1E-06 58.9 11.0 155 167-355 13-186 (334)
47 PRK13903 murB UDP-N-acetylenol 94.4 0.17 3.7E-06 60.0 9.8 143 167-342 25-179 (363)
48 TIGR01678 FAD_lactone_ox sugar 94.4 0.1 2.3E-06 63.7 8.2 102 177-300 16-121 (438)
49 PRK14649 UDP-N-acetylenolpyruv 94.3 0.21 4.6E-06 57.7 10.3 161 167-355 13-190 (295)
50 COG0812 MurB UDP-N-acetylmuram 94.2 0.38 8.3E-06 54.8 11.7 163 168-357 14-183 (291)
51 PLN02465 L-galactono-1,4-lacto 94.1 0.21 4.5E-06 62.5 10.2 102 176-299 97-202 (573)
52 PRK11230 glycolate oxidase sub 93.7 0.15 3.3E-06 63.4 8.0 102 178-298 58-163 (499)
53 PRK14651 UDP-N-acetylenolpyruv 93.4 0.5 1.1E-05 53.8 10.7 155 167-356 13-169 (273)
54 TIGR01677 pln_FAD_oxido plant- 93.3 0.37 8.1E-06 60.4 10.5 161 177-356 33-210 (557)
55 PRK14648 UDP-N-acetylenolpyruv 93.1 0.56 1.2E-05 55.1 10.8 85 167-255 22-112 (354)
56 PLN02805 D-lactate dehydrogena 92.9 0.25 5.4E-06 62.0 8.2 101 177-298 135-239 (555)
57 TIGR01679 bact_FAD_ox FAD-link 92.8 0.24 5.3E-06 60.3 7.6 101 177-299 13-114 (419)
58 PRK09970 xanthine dehydrogenas 91.7 3 6.4E-05 54.9 16.2 192 687-880 457-737 (759)
59 PRK11282 glcE glycolate oxidas 90.4 0.66 1.4E-05 55.0 7.6 95 185-299 7-102 (352)
60 TIGR03194 4hydrxCoA_A 4-hydrox 89.8 11 0.00023 49.6 18.7 59 688-747 442-511 (746)
61 TIGR03311 Se_dep_Molyb_1 selen 89.0 5.2 0.00011 53.2 15.0 86 1-87 53-146 (848)
62 PRK09800 putative hypoxanthine 88.8 6.6 0.00014 52.7 15.8 85 2-87 58-151 (956)
63 PLN02441 cytokinin dehydrogena 88.7 3.6 7.9E-05 51.3 12.4 157 177-355 66-239 (525)
64 PF02738 Ald_Xan_dh_C2: Molybd 87.4 11 0.00024 47.8 16.0 191 958-1239 48-239 (547)
65 TIGR03313 Se_sel_red_Mo probab 85.5 12 0.00025 50.5 15.3 85 2-87 54-147 (951)
66 TIGR03196 pucD xanthine dehydr 83.9 38 0.00083 44.7 18.9 60 958-1028 182-241 (768)
67 TIGR02969 mam_aldehyde_ox alde 83.4 6.9 0.00015 54.5 12.2 59 688-747 1015-1084(1330)
68 PLN02906 xanthine dehydrogenas 83.1 45 0.00098 46.7 19.9 191 958-1239 740-933 (1319)
69 PLN00192 aldehyde oxidase 79.1 41 0.00088 47.2 17.3 190 958-1239 761-952 (1344)
70 TIGR02416 CO_dehy_Mo_lg carbon 70.4 7.7 0.00017 51.1 6.7 71 691-764 476-557 (770)
71 TIGR02965 xanthine_xdhB xanthi 68.5 7.6 0.00016 51.1 6.1 58 689-747 446-514 (758)
72 PF02594 DUF167: Uncharacteris 58.9 33 0.00072 31.5 6.6 51 963-1013 18-68 (77)
73 PRK13904 murB UDP-N-acetylenol 58.2 37 0.0008 38.6 8.3 145 168-356 12-158 (257)
74 PF10437 Lip_prot_lig_C: Bacte 48.2 70 0.0015 29.7 7.2 53 375-435 16-68 (86)
75 PF08869 XisI: XisI protein; 47.4 31 0.00067 33.9 4.7 39 961-1009 55-97 (111)
76 PRK00647 hypothetical protein; 28.8 1.3E+02 0.0028 28.9 5.5 45 969-1013 25-69 (96)
77 PTZ00397 macrophage migration 26.1 58 0.0013 32.1 3.0 31 984-1014 75-105 (116)
78 PTZ00450 macrophage migration 24.3 54 0.0012 32.4 2.3 28 985-1012 76-103 (113)
79 PRK05090 hypothetical protein; 23.6 1.8E+02 0.004 27.9 5.6 45 969-1013 30-74 (95)
80 PRK01530 hypothetical protein; 22.4 1.9E+02 0.0041 28.4 5.5 44 970-1013 38-81 (105)
No 1
>PLN02906 xanthine dehydrogenase
Probab=100.00 E-value=3.1e-256 Score=2488.56 Aligned_cols=1248 Identities=79% Similarity=1.278 Sum_probs=1133.3
Q ss_pred ccccccC---CCceecCCC-------CcHHHHHHHHcCCCCCCCCChHHHHHHHHHHHcCC-CCCCHHHHHHHccCcccc
Q 000805 2 ACIQFNA---NKLLTSLDL-------RYVLQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQ-TPPTEEQIEESLAGNLCR 70 (1276)
Q Consensus 2 ~c~~~~~---~~~~~t~~~-------~~~~q~~~~~~~~~qCg~Ctpg~v~~~~~~l~~~~-~~~~~~~i~~~~~gnlCr 70 (1276)
||++|+. |++|+|+|+ +||||++|+++|++|||||||||||++|+||++++ .| ++++|+++|+|||||
T Consensus 49 sC~~~~~~~~g~~i~Tvegl~~~~~~~~~vq~a~~~~~~~QCG~CtpG~vm~~~~ll~~~~~~~-~~~~i~~~l~gnlCR 127 (1319)
T PLN02906 49 ACLAPLYSVEGMHVITVEGIGNRRDGLHPVQEALASMHGSQCGFCTPGFIMSMYALLRSSKTPP-TEEQIEECLAGNLCR 127 (1319)
T ss_pred hhHHHHHHhCCCEEEecCCCCCCCCCCCHHHHHHHHcCCCcCCCCchHHHHHHHHHHHhCCCCC-CHHHHHHHhcCCccc
Confidence 8999999 899999997 69999999999999999999999999999999884 67 999999999999999
Q ss_pred CCCCHhHHHHHHHHHhcccccc-c-cccccCcCCCccccCCCCCCCCCCCCCCCCCCccccccccCCCcccccccc----
Q 000805 71 CTGYRPIVDAFRVFAKTNDALY-T-NMSSMSLKEGEFVCPSTGKPCSCGMKNVSNADTCEKSVACGKTYEPVSYSE---- 144 (1276)
Q Consensus 71 Ctgy~~i~~a~~~~~~~~~~~~-~-~~~~~~~~~~~~~c~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 144 (1276)
||||+||++|+++++.+.+... + ... +++++++||..++..+.|....++.. ..++ .+ +|++
T Consensus 128 Ctgy~~i~~a~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~--~~--~~~~~~~~ 195 (1319)
T PLN02906 128 CTGYRPILDAFRVFAKTDDALYTGVSSL--SLQDGEPICPSTGKPCSCGSKTTSAA------GTCK--SD--RFQPISYS 195 (1319)
T ss_pred CCCCHHHHHHHHHHHhcccccCCcccch--hhhhccccccccCccccccccccccc------cccc--cc--cccccccc
Confidence 9999999999999998742100 0 000 22333345533221101100000000 0000 01 3333
Q ss_pred CCCCcCCcc-ccCCchhhhhcCCCCcccccCCCeEEEecCCHHHHHHHHhcCCCcEEEEccchhhHHHHhCcCCCCeEEe
Q 000805 145 IDGSTYTEK-ELIFPPELLLRKSNPLNLSGFGGLKWYRPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLKRMQYQVLIS 223 (1276)
Q Consensus 145 ~~~~~~~~~-~~~~p~~l~~~~~~~~~~~~~~~~~~~~P~sl~eal~ll~~~~~a~lvaGgTdl~v~~~~~~~~~~~lId 223 (1276)
++|.+|+|. |++||++|+.....++.+.+.++++|++|+||+||+++|+++|++++|||||||+++++++...++++||
T Consensus 196 ~~~~~~~~~~~~~f~~~l~~~~~~~~~~~~~~~~~~~~P~tl~ea~~ll~~~~~a~ivAGGTdl~~~~~~~~~~~~~lId 275 (1319)
T PLN02906 196 EIDGSWYTEKELIFPPELLLRKLTPLKLLGNGGLTWYRPTSLQHLLELKAEYPDAKLVVGNTEVGIEMRFKNAQYPVLIS 275 (1319)
T ss_pred ccccccCccccccCCHHHhhCCCcceeecCCCCceEECcCCHHHHHHHHHhCCCCEEEEcCchhHHHhhhccCCCCeEEE
Confidence 688999999 9999999975444556663335789999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccEEEcCCeEEEcccccHHHHHHHhhhhhhcCCccchhhHHHHHHHHHhhcCcccceeeeecccccccCCCCC
Q 000805 224 VTHVPELNVLNVKDDGLEIGAAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISD 303 (1276)
Q Consensus 224 l~~i~EL~~I~~~~~~l~IGA~vTl~~l~~~l~~~~~~~~~~~~~~~~~L~~~~~~ias~qIRN~aTiGGNi~~asp~sD 303 (1276)
|++|+||+.|+.++++|+|||+|||++|+++|.+.+.+.++.+.+.+|.|.+++++|||+||||+||||||||+++|+||
T Consensus 276 i~~I~eL~~I~~~~~~l~IGA~vT~~el~~~l~~~i~~~~~~~~~~~p~L~~~~~~ias~qIRN~aTiGGNI~~asP~sD 355 (1319)
T PLN02906 276 PTHVPELNAIKVKDDGLEIGAAVRLSELQNLFRKVVKERPAHETSACKAFIEQLKWFAGTQIRNVASIGGNICTASPISD 355 (1319)
T ss_pred CCCChhhhcEEecCCEEEEecCCcHHHHHHHHHHHhhhcchhhhHHHHHHHHHHHHhCCHhhcCceechhhhccCCCchh
Confidence 99999999999999999999999999999998888876666667789999999999999999999999999999999999
Q ss_pred HHHHHHHcCCEEEEEeCCCcEEEEEhHhHhccCccccCCCceEEEEEEccCCCCCccEEEEEEeccCcccccccceEEEE
Q 000805 304 LNPLWMASGAKFHIVDCKGNIRTTMAEEFFLGYRKVDLTSGEILLSIFLPWTRPFEFVKEFKQAHRRDDDIALVNAGMRV 383 (1276)
Q Consensus 304 ~~p~Llal~A~v~l~s~~g~~R~vpl~~F~~g~~~t~L~~~Eii~~I~iP~~~~~~~~~~~K~~~R~~~d~a~v~~A~~~ 383 (1276)
++|+|+||||+|+|.+.+|++|+||++|||+||++|.|+++|||++|+||.+.++.++.+||+++|+++|||+||+|+.+
T Consensus 356 ~~p~LlAl~A~v~l~s~~g~~R~vpl~dFf~g~~kt~L~~~Eil~~I~iP~~~~~~~~~~~K~~~R~~~dia~V~~A~~v 435 (1319)
T PLN02906 356 LNPLWMAAGATFVIISCDGDIRSVPASDFFLGYRKVDLKPDEILLSVFLPWTRPFEYVKEFKQAHRRDDDIAIVNAGMRV 435 (1319)
T ss_pred HHHHHHHcCcEEEEEcCCCCeEEEEHHHhcCccccccCCCCceEEEEEccCCCCCccEEEEEEcCccccchhheeeEEEE
Confidence 99999999999999998854799999999999999999999999999999876667888999999999999999999999
Q ss_pred EEecCCcceEEEEEEEEEecCCCcceeHHHHHHHhcCCCCCHHHHHHHHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHH
Q 000805 384 YLEEKDEEWVVSDALLVYGGVAPLSLSAKKTKTFIVGKSWSQELLQNALKILQTDIILKEDAPGGMVDFRKSLTLSFFFK 463 (1276)
Q Consensus 384 ~~~~~~~~~~i~~~ria~Ggv~~~p~ra~~~E~~L~Gk~~~~~~l~~a~~~l~~e~~~~~~~~~~s~~YR~~la~~l~~r 463 (1276)
+++++++.++|+++||+||||+++|+|+.++|++|.|++|+++++++|++.+.+++.|.++.+++|++||++|+++||+|
T Consensus 436 ~l~~~~~~~~i~~aria~Ggva~~p~ra~~~E~~L~G~~~~~~~i~~A~~~l~~~~~p~~d~~~~sa~YR~~la~~ll~r 515 (1319)
T PLN02906 436 KLEEKDGEWIVSDASIAYGGVAPLSVSARKTEEFLIGKPWNKETLQDALKVLQKDILIKEDAPGGMVEFRKSLALSFFFK 515 (1319)
T ss_pred EEecCCCCceEeEEEEEEeccCCceecHHHHHHHhcCCCCCHHHHHHHHHHHHhccCCCcCCCCCCHHHHHHHHHHHHHH
Confidence 99741111269999999999999999999999999999999999999999999999988877789999999999999999
Q ss_pred HHHHHHHhhcCCCCCccCCCCccccccccccCCCccccccccccCCCCcCCCcccccCccccccceeEecccCCCCCCcE
Q 000805 464 FFLWVSHQMEGKNSIKESVPSTHLSAMQSFHRPSIIGNQDYEITKHGTSVGSPEVHLSSRLQVTGEAEYTDDTPMPPNCL 543 (1276)
Q Consensus 464 ~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~q~~~~~~~~~~vGk~~~r~d~~~kvtG~a~Y~~Di~~~~gmL 543 (1276)
||+++.+++.........+++.+.|+...++||+|+|+|.|+..+++++|||+++|+|+..||||+++|++|++++||||
T Consensus 516 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~~~~~vGk~~~r~d~~~kvtG~a~Y~~Di~~~~g~L 595 (1319)
T PLN02906 516 FFLWVSHQLEADGSTIETFPESHLSAAQPFPRPSSVGMQDYETVKQGTAVGQPEVHLSAELQVTGEAEYADDIPMPPNTL 595 (1319)
T ss_pred HHHHHhhhccccccccccCChhhccccccccCCCCccceecccccccccCCCCccCcchhhhcceeEEeccCCcCCCCCE
Confidence 99999988732111223478899999999999999999999977889999999999999999999999999999767999
Q ss_pred EEEEEeCCCCCeEEEEeeCccccCCCCEEEEEecCCCCCCCCCCCCCCcccccccCeEeecCCeEEEEEECCHHHHHHhc
Q 000805 544 HAALVLSRRPHARILSIDDSGARSSPGFVGIFFAEDVQGDNRIGPVVADEELFASEVVTCVGQVIGVVVAETHEEAKLAS 623 (1276)
Q Consensus 544 ~a~~vrSp~a~a~I~sID~s~A~~~pGV~~vvt~~Dipg~n~~~~~~~d~~~~a~~~V~y~GqpVa~VvAet~~~A~~Aa 623 (1276)
|+++||||++||+|++||+++|++||||++|+|++|+|+.|.+|....|+|+|++++|+|+|||||+|||+|+++|++|+
T Consensus 596 ~a~~vrSp~aharI~sID~s~A~~~pGV~~v~t~~Dip~~~~~g~~~~~~~~la~~~V~y~GqpVa~VvA~t~~~A~~Aa 675 (1319)
T PLN02906 596 HAALVLSTKPHARILSIDDSEAKSSPGFAGIFLAKDVPGDNMIGPVVHDEELFATDVVTCVGQVIGVVVADTQENAKAAA 675 (1319)
T ss_pred EEEEEecCcCceEEeecchHHHhCCCCeEEEEchhhCCCCCCCCCCCCCeeEecCcEEEEcCCeEEEEEECCHHHHHHHh
Confidence 99999999999999999999999999999999999999877777767799999999999999999999999999999999
Q ss_pred ccceeeEeecCCCCCHHHHHhcCCCCCCCcceeecCCcccccccCC--CccEEEEEEEeCcccccCCCCCeeEEEEecCC
Q 000805 624 RKVQVEYEELPAILSIQEAIDAKSFHPNTERCFRKGDVDICFQSGQ--CDKIIEGEVRVGGQEHFYLEPHSSVVWTMDHG 701 (1276)
Q Consensus 624 ~~V~V~ye~lp~v~~~~~A~~~~s~~~~~~~~~~~Gd~~~af~~~~--a~~vve~~~~~~~~~H~~mEp~~~~a~~~~~~ 701 (1276)
++|+|+||+||+++|+++|++++++|+.....+.+||++++| ++ +++|||++|++++|+|+||||++|+|+|+ ++
T Consensus 676 ~~V~Veye~lp~v~~~~~Al~~~a~~~~~~~~~~~Gdv~~af--~~a~a~~vve~~~~~~~~~H~~mEp~~~~A~~~-~~ 752 (1319)
T PLN02906 676 RKVKVEYEELPAILSIEEAIEAGSFHPNTERRLEKGDVELCF--ASGQCDRIIEGEVQMGGQEHFYLEPNSSLVWTS-DS 752 (1319)
T ss_pred CCCEEEEecCCccCCHHHHhcCCCcccCCCceeecCCHHHHh--hccCCceEEEEEEEECCccccccCCCeEEEEEe-CC
Confidence 999999999999999999999988775333456899999999 87 79999999999999999999999999998 46
Q ss_pred -CeEEEEeCCCChHHHHHHHHHHhCCCCCcEEEEecccCCCCCCCCCcchHHHHHHHHHHHhCCCCEEEEechHHHHhhc
Q 000805 702 -NEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKETRSAFIAAAAAVPSFLLNRPVNLTLDRDIDMMIS 780 (1276)
Q Consensus 702 -g~l~V~~stQ~p~~~r~~vA~~Lglp~~kV~V~~~~vGGgFGgK~~~~~~~a~~aAlaA~~~grPVkl~~tR~ed~~~~ 780 (1276)
|+|+||+|||+|+.+|..||++||||++||||+++++|||||+|.+....++++||++|+++||||||+|||+|+|+++
T Consensus 753 ~g~l~v~~sTQ~p~~~r~~vA~~Lgip~~kVrV~~~~vGGgFGgK~~~~~~~~~~aAlaA~~~gRPVkl~~sReE~~~~~ 832 (1319)
T PLN02906 753 GNEVHMISSTQAPQKHQKYVAHVLGLPMSKVVCKTKRIGGGFGGKETRSAFIAAAAAVPAYLLNRPVKLTLDRDVDMMIT 832 (1319)
T ss_pred CCEEEEEECCcCHHHHHHHHHHHhCCChHHeEEEeCCcccCccccccccchHHHHHHHHHHHhCCCEEEEecHHHHhhhc
Confidence 6899999999999999999999999999999999999999999998655567889999999999999999999999999
Q ss_pred CCCCCeEEEEEEEECCCCcEEEEEEEEEecCCCCCCchHHHHHHHhhccCCCcccCeEEEEEEEEecCCCCCCcccCCCh
Q 000805 781 GQRHSFLGKYKVGFTNEGKVLALDLEIYNNAGNSLDLSLAVLERAMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGG 860 (1276)
Q Consensus 781 ~~R~~~~~~~k~g~~~dG~i~a~~~~~~~d~Ga~~~~~~~v~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~~a~Rg~G~ 860 (1276)
++||++.++||+|+|+||+|++++++++.|+|+|.+++..++.+++.++.++|+|||++++++.|+||++|+|+|||||.
T Consensus 833 ~~R~~~~~~~k~g~~~dG~I~a~~~~~~~d~Ga~~~~~~~v~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~RG~G~ 912 (1319)
T PLN02906 833 GQRHAFLGKYKVGFTNEGKILALDLEIYNNGGNSLDLSGAVLERAMFHSDNVYEIPNVRIVGNVCFTNFPSNTAFRGFGG 912 (1319)
T ss_pred CCccceEEEEEEEECCCCCEEEEEEEEEecCcccCCcchHHHHHHHHhcCCCccCcceEEEEEEEECCCCCCCcccCCCH
Confidence 99999999999999999999999999999999999888888888888999999999999999999999999999999999
Q ss_pred hhhHhHHHHHHHHHHHHcCCCHHHHHHHhcCCCCCccccCccccCCCHHHHHHHHHHhCCChhhHHhHhhhhccCCcccc
Q 000805 861 PQGMLITENWIQRVAVEVRKSPEEIREINFQGEGSILHYGQQLQHCTLFPLWNELKLSCDFLNARKEVDNFNLNNRWKKR 940 (1276)
Q Consensus 861 ~q~~fa~E~~md~lA~~lg~DP~e~R~~Nl~~~g~~~~~g~~~~~~~l~~~l~~~~~~~~~~~r~~~~~~fn~~~~~~~r 940 (1276)
+|++|++|++||++|++|||||+|||++|++++|+.+++|+.++++.+++||+++++.++|++|++++++||+.++|+||
T Consensus 913 pq~~fa~E~~mD~lA~~lG~DP~e~R~~Nl~~~g~~~~~g~~~~~~~~~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~kr 992 (1319)
T PLN02906 913 PQGMLITENWIQRIAVELNKSPEEIREMNFQGEGSVTHYGQVLQHCTLPQLWDELKVSCDFLKRREEVDEFNAKNRWKKR 992 (1319)
T ss_pred HHHHHHHHHHHHHHHHHhCcCHHHHHHHhCCCCCCCCcCCccccCCCHHHHHHHHHHhCCHHHHHHHHHHHhhcCCCceE
Confidence 99999999999999999999999999999999999999999999999999999999999999998888899999999999
Q ss_pred ceEEEeeeeccccccccCCceeEEEEEecCCeEEEEEcCccCCcchHHHHHHHHHHHhCCCcccEEEecCCCCCCCCCCC
Q 000805 941 GIAMVPTKFGISFTLKLMNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETSTDKVPNASP 1020 (1276)
Q Consensus 941 Gia~~~~~~g~~~~~~~~~~~~a~V~l~~DGsV~V~~g~~e~GqG~~T~~~qiaAe~Lgip~~~V~v~~~dT~~~p~~~~ 1020 (1276)
|+++++.+||.++...+.+++++.|+|++||+|+|.+|++|||||++|+++||||++||||+|+|+|..+||+.+|++++
T Consensus 993 GiG~a~~~~g~~~~~~~~~~~~a~V~i~~DGsV~V~~G~~e~GQG~~T~~aQiaAe~LGip~d~V~v~~~DT~~~p~~~g 1072 (1319)
T PLN02906 993 GVAMVPTKFGISFTTKFMNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFISETSTDKVPNASP 1072 (1319)
T ss_pred EEEEEecccccccccccCCccceEEEEcCCceEEEEECCccCCCChHHHHHHHHHHHHCCCHHHEEEEccCCCCCCCCCC
Confidence 99999999998775444577899999999999999999999999999999999999999999999999999999999999
Q ss_pred CccchhhhHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHhhccCcceeEEEEeecCCccccccCCCCCCcccccEE
Q 000805 1021 TAASASSDIYGAAVLDACEQIKARMEPIASKHNFNSFAELASACYVQRIDLSAHGFYITPEIDFDWITGKGNPFRYFTYG 1100 (1276)
Q Consensus 1021 t~~Sr~t~~~g~Av~~Ac~~l~~rl~~~~~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g 1100 (1276)
|+|||+|+++|+||++||++||+||++++++.+..+|++++..+|..+.+|+++++|..|..+++|.++.+.++.||+||
T Consensus 1073 T~aSr~t~~~G~Av~~Aa~~l~~rl~~~a~~~~~~~~~~l~~~~~~~~~~l~a~~~~~~~~~~~~~~~~~~~~~~~~~~g 1152 (1319)
T PLN02906 1073 TAASASSDMYGAAVLDACEQIKARMEPVASKLNFSSFAELVTACYFQRIDLSAHGFYITPDIGFDWKTGKGNPFNYFTYG 1152 (1319)
T ss_pred CccchhhHhHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhhccCCCeEEEEEecCCCcccccccccCCCccceeee
Confidence 99999999999999999999999999998877779999999998877778999999987655566766667777789999
Q ss_pred EEEEEEEeeCCCCcEEEeEEEEEEecCcccChhhhhhhhhhHHHHHHHHHhcceEEecCCCCccCCCCccccCCCCCCCC
Q 000805 1101 AAFAEVEIDTLTGDFHTRMANVILDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPGCLYTCGPGSYKI 1180 (1276)
Q Consensus 1101 a~~~eVEVD~~TG~v~V~r~~~v~D~G~~iNP~~~~gQieGg~~qGlG~al~Ee~~~d~~~~~~~~~G~~~t~~~~~Y~i 1180 (1276)
+|++|||||++||+++|+|+++++|||++|||.+++|||||||+||||++|+||+.||++.|+|+.+|+++|++|++|+|
T Consensus 1153 a~~~eVeVD~~TG~v~vlr~~~v~D~G~~iNP~~~~GQieGg~vqGiG~aL~Ee~~~d~~~~~~~~~G~llt~~~~~Y~i 1232 (1319)
T PLN02906 1153 AAFAEVEIDTLTGDFHTRRVDIVMDLGYSINPAIDIGQIEGAFVQGLGWVALEELKWGDAAHKWIRPGSLFTCGPGTYKI 1232 (1319)
T ss_pred EEEEEEEEecCCCcEEEEEEEEEEecCccCCHHHHhHhhHHHHHHHHHHHhcCceEEcccccccCCCCccccCCCcccCC
Confidence 99999999999999999999999999999999999999999999999999999999986568999999999999999999
Q ss_pred CCCCCCCCccEEEEecCCCCCCCCCCCCcCCCCCccchhhHHHHHHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHhccc
Q 000805 1181 PSLNDVPLKFNVSLLKGHPNVKAIHSSKAVGEPPFFLASSVFFAIKDAISAARADAGHTGWFPLDNPATPERIRMACLDE 1260 (1276)
Q Consensus 1181 P~~~diP~~~~v~~~~~~~~~~~~~gaKgvGE~~~~~~~~v~~Ai~nAi~~A~~~~G~~~~~~~~~P~Tpe~i~~a~~~~ 1260 (1276)
|++.|||.+|+|.++++.++|.+|||+||+||+|++++++|++||+|||++||++.|++++|++++|+|||+|+++|.++
T Consensus 1233 Pt~~DiP~~~~v~~~~~~~~~~~p~gaKGvGE~~~~~~aav~~AI~~Ai~~A~~~~g~~~~~~~~~P~Tperi~~a~~~~ 1312 (1319)
T PLN02906 1233 PSVNDIPFKFNVSLLKGAPNPKAIHSSKAVGEPPFFLAASVFFAIKDAIKAARAEVGLHGWFPLDTPATPERIRMACGDE 1312 (1319)
T ss_pred CCccccCCceEEEEEeCCCCCCCCCcCccCCccccccchHHHHHHHHHHHHHHhhcCCCCcccCCCCCCHHHHHHHccch
Confidence 99999996699999963389999999999999999998999999999999999988888888999999999999999999
Q ss_pred ccccc
Q 000805 1261 FTAPF 1265 (1276)
Q Consensus 1261 ~~~~~ 1265 (1276)
+++++
T Consensus 1313 ~~~~~ 1317 (1319)
T PLN02906 1313 ITAPF 1317 (1319)
T ss_pred hhhhh
Confidence 88764
No 2
>TIGR02969 mam_aldehyde_ox aldehyde oxidase. Members of this family are mammalian aldehyde oxidase (EC 1.2.3.1) isozymes, closely related to xanthine dehydrogenase/oxidase.
Probab=100.00 E-value=7e-252 Score=2443.98 Aligned_cols=1233 Identities=41% Similarity=0.703 Sum_probs=1112.7
Q ss_pred ccccccC---CCceecCCC-------CcHHHHHHHHcCCCCCCCCChHHHHHHHHHHHcCCCCCCHHHHHHHccCccccC
Q 000805 2 ACIQFNA---NKLLTSLDL-------RYVLQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLAGNLCRC 71 (1276)
Q Consensus 2 ~c~~~~~---~~~~~t~~~-------~~~~q~~~~~~~~~qCg~Ctpg~v~~~~~~l~~~~~~~~~~~i~~~~~gnlCrC 71 (1276)
||++|+. |++|+|+|+ +||||+||+++|++|||||||||||++++||++++.| +++||+++|+||||||
T Consensus 69 sCl~~~~~~~g~~v~TvEgl~~~~~~l~pvq~a~~~~~~~QCGfCtpG~vm~~~~ll~~~~~p-~~~~i~~~l~gnlCRC 147 (1330)
T TIGR02969 69 ACLTPICSLYGAAVTTVEGIGSTRTRLHPVQERIAKCHGTQCGFCTPGMVMSMYALLRNHPEP-TLDQLTDALGGNLCRC 147 (1330)
T ss_pred hhHHHHHHhCCCEEEecCCcCCCCCCCCHHHHHHHHcCCCcCCCCchHHHHHHHHHHHcCCCC-CHHHHHHHhcCCcccC
Confidence 8999998 899999997 6999999999999999999999999999999999999 9999999999999999
Q ss_pred CCCHhHHHHHHHHHhccccccccccccCcCC-CccccCCCCCCCCCCCCCCCCCCccccccccCCCccccccccCCCCcC
Q 000805 72 TGYRPIVDAFRVFAKTNDALYTNMSSMSLKE-GEFVCPSTGKPCSCGMKNVSNADTCEKSVACGKTYEPVSYSEIDGSTY 150 (1276)
Q Consensus 72 tgy~~i~~a~~~~~~~~~~~~~~~~~~~~~~-~~~~c~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (1276)
|||++|++|+++++.+.. | ++++ +.+||+.+...+.| .|.. | ......+|+.+++.+|
T Consensus 148 tgY~~i~~a~~~~~~~~~--~------~~~~~~~~~c~~~~~~~~~---------~~~~---~-~~~~~~~~~~~~~~~~ 206 (1330)
T TIGR02969 148 TGYRPIIDACKTFCKTSG--C------CQSKENGVCCLDQGINGLP---------EFEE---G-DETSPELFSEEEFLPL 206 (1330)
T ss_pred CCCHHHHHHHHHHhhccC--C------chhccccCccccccccccc---------cccc---c-ccccccccchhcccCC
Confidence 999999999999987632 1 1122 12355421100000 0110 0 0000125666788889
Q ss_pred Ccc-ccCCchhhhhc-C--CCC-cccccCCCeEEEecCCHHHHHHHHhcCCCcEEEEccchhhHHHHhCcCCCCeEEeCC
Q 000805 151 TEK-ELIFPPELLLR-K--SNP-LNLSGFGGLKWYRPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLKRMQYQVLISVT 225 (1276)
Q Consensus 151 ~~~-~~~~p~~l~~~-~--~~~-~~~~~~~~~~~~~P~sl~eal~ll~~~~~a~lvaGgTdl~v~~~~~~~~~~~lIdl~ 225 (1276)
++. ++|||++|+.. . ..+ +.+ ..++.+|++|+||+||+++|+++|++++|||||||+++++++...++.+|||+
T Consensus 207 ~~~~~~~fp~~l~~~~~~~~~~~~~~-~~~~~~~~~P~tl~ea~~ll~~~~~a~lvAGGTdl~~~~k~~~~~~~~lIdi~ 285 (1330)
T TIGR02969 207 DPTQELIFPPELMRMAEKQPQRTRVF-YSERMMWISPVTLKELLEAKFKYPQAPVVMGNTSVGPEVKFKGVFHPVIISPD 285 (1330)
T ss_pred CccccccCChhHhhcccccccceeee-cCCCceEECCCCHHHHHHHHHhCCCCEEEecCcchHHHhhhccCCCCeEEECC
Confidence 998 99999999853 1 223 455 33457999999999999999999999999999999999999988899999999
Q ss_pred CCCCCccEEEcCCeEEEcccccHHHHHHHhhhhhhcCCccchhhHHHHHHHHHhhcCcccceeeeecccccccCCCCCHH
Q 000805 226 HVPELNVLNVKDDGLEIGAAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDLN 305 (1276)
Q Consensus 226 ~i~EL~~I~~~~~~l~IGA~vTl~~l~~~l~~~~~~~~~~~~~~~~~L~~~~~~ias~qIRN~aTiGGNi~~asp~sD~~ 305 (1276)
+|+||+.|+.++++|+|||+|||++|++.|.+.+.++++...+.+|.|.+++++|||+||||+|||||||||+||+||++
T Consensus 286 ~I~EL~~i~~~~~~l~IGA~vT~~el~~~l~~~i~~~p~~~~~~~p~L~~a~~~ias~qIRN~gTlGGNi~~asP~sD~~ 365 (1330)
T TIGR02969 286 RIEELSVVNHTGDGLTLGAGLSLAQVKDILADVVQKLPEETTQTYRALLKHLGTLAGSQIRNMASLGGHIISRHLDSDLN 365 (1330)
T ss_pred CChhhhcEEEcCCEEEEeccccHHHHHHHHHHhhhcCchhhhHHHHHHHHHHHHhCChhhcccccchhhcccCCCchhHH
Confidence 99999999999999999999999999998888877666666678999999999999999999999999999999999999
Q ss_pred HHHHHcCCEEEEEeCCCcEEEEEhHhHh-ccCccccCCCceEEEEEEccCCCCCccEEEEEEeccCcccccccceEEEEE
Q 000805 306 PLWMASGAKFHIVDCKGNIRTTMAEEFF-LGYRKVDLTSGEILLSIFLPWTRPFEFVKEFKQAHRRDDDIALVNAGMRVY 384 (1276)
Q Consensus 306 p~Llal~A~v~l~s~~g~~R~vpl~~F~-~g~~~t~L~~~Eii~~I~iP~~~~~~~~~~~K~~~R~~~d~a~v~~A~~~~ 384 (1276)
|+|+||||+|+|.+.+| +|+||++||| .+|++|+|+++|||++|+||.+..+.++++||+++|+++|||+||+|+.++
T Consensus 366 p~LlAl~A~v~l~s~~g-~R~vpl~dff~~~~~~t~L~~~Eil~~I~iP~~~~~~~~~~~K~~~R~~~dia~V~~A~~v~ 444 (1330)
T TIGR02969 366 PLLAVGNCTLNLLSKEG-KRQIPLSEQFLSKCPDADLKPQEILVSVNIPYSRKWEFVSAFRQAQRQQNALAIVNSGMRVF 444 (1330)
T ss_pred HHHHHcCcEEEEecCCc-eEEEehHHhhhcccccccCCCCceEEEEEecCCCCccceeEEEEcCCccccHHHhhheEEEE
Confidence 99999999999999999 9999999988 689999999999999999998765567889999999999999999999999
Q ss_pred Ee-cCCcceEEEEEEEEEecCCCcceeHHHHHHHhcCCCCCHHHHHHHHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHH
Q 000805 385 LE-EKDEEWVVSDALLVYGGVAPLSLSAKKTKTFIVGKSWSQELLQNALKILQTDIILKEDAPGGMVDFRKSLTLSFFFK 463 (1276)
Q Consensus 385 ~~-~~~~~~~i~~~ria~Ggv~~~p~ra~~~E~~L~Gk~~~~~~l~~a~~~l~~e~~~~~~~~~~s~~YR~~la~~l~~r 463 (1276)
++ +++ +|+++||+||||+|+|+|+.++|++|.||+|+++++++|++++.+++.|+.+++|+|++||++|+.+||+|
T Consensus 445 l~~~~~---~i~~aria~Ggvap~p~ra~~~E~~L~Gk~~~~~~~~~A~~~l~~~~~p~~~d~r~sa~YRr~la~~ll~k 521 (1330)
T TIGR02969 445 FGEGDG---IIRELSISYGGVGPTTICAKNSCQKLIGRPWNEEMLDTACRLILDEVSLAGSAPGGKVEFKRTLIISFLFK 521 (1330)
T ss_pred EEcCCC---EEeEEEEEEEcCcCceecHHHHHHHhcCCCCCHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHH
Confidence 96 456 89999999999999999999999999999999999999999999999877777899999999999999999
Q ss_pred HHHHHHHhhcCC-CCCccCCCCccccccccccCCCccccccccccC--CC--CcCCCcccccCccccccceeEecccCCC
Q 000805 464 FFLWVSHQMEGK-NSIKESVPSTHLSAMQSFHRPSIIGNQDYEITK--HG--TSVGSPEVHLSSRLQVTGEAEYTDDTPM 538 (1276)
Q Consensus 464 ~l~~~~~~~~~~-~~~~~~~~~~~~s~~~~~~~~~~~~~q~~~~~~--~~--~~vGk~~~r~d~~~kvtG~a~Y~~Di~~ 538 (1276)
||+++..++... ....+.+++.+.|+...++||+++|+|.|+... +. ++|||+++|+|++.||||+++|++|++.
T Consensus 522 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vGk~v~r~d~~~kvtG~a~Y~~Di~~ 601 (1330)
T TIGR02969 522 FYLEVSQILKRMDPGHYPSLADKYESALEDLHSKHHWSTLKHQNVDSMQLPQDPIGHPIMHLSGVKHATGEAIYCDDMPA 601 (1330)
T ss_pred HHHHHhhhhccccccccccCChhhccccccccCCCCccccceecccccccccCcCCCCCcChhhHhhccccccccCCCCC
Confidence 999999887421 111234667888999999999999999998422 22 7899999999999999999999999984
Q ss_pred CCCcEEEEEEeCCCCCeEEEEeeCccccCCCCEEEEEecCCCCCCCCCCCCCCcccccccCeEeecCCeEEEEEECCHHH
Q 000805 539 PPNCLHAALVLSRRPHARILSIDDSGARSSPGFVGIFFAEDVQGDNRIGPVVADEELFASEVVTCVGQVIGVVVAETHEE 618 (1276)
Q Consensus 539 ~~gmL~a~~vrSp~a~a~I~sID~s~A~~~pGV~~vvt~~Dipg~n~~~~~~~d~~~~a~~~V~y~GqpVa~VvAet~~~ 618 (1276)
+|||||+++||||++||+|++||+++|++||||++|+|++|+|+.|.++ ++++|++++|+|+|||||+|||+|+++
T Consensus 602 ~pgmL~a~~vrSp~ahArI~sID~s~A~~~pGV~~V~t~~Dvp~~~~~~----~~~~la~~~Vr~~Gqpva~VvAet~~~ 677 (1330)
T TIGR02969 602 VDQELFLTFVTSSRAHAKIVSIDLSEALSLPGVVDIITAEHLQDANTFG----TEKLLATDKVHCVGQLVCAVIADSEVQ 677 (1330)
T ss_pred CCCCEEEEEEecCCCceEEEeeeHHHHhcCCCeEEEEeHHHCCCCCCCC----CeeecCCCeEEEcCCeEEEEEECCHHH
Confidence 4899999999999999999999999999999999999999999665443 789999999999999999999999999
Q ss_pred HHHhcccceeeEeec-CCCCCHHHHHhcCCCCCCCcceeecCCcccccccCCCccEEEEEEEeCcccccCCCCCeeEEEE
Q 000805 619 AKLASRKVQVEYEEL-PAILSIQEAIDAKSFHPNTERCFRKGDVDICFQSGQCDKIIEGEVRVGGQEHFYLEPHSSVVWT 697 (1276)
Q Consensus 619 A~~Aa~~V~V~ye~l-p~v~~~~~A~~~~s~~~~~~~~~~~Gd~~~af~~~~a~~vve~~~~~~~~~H~~mEp~~~~a~~ 697 (1276)
|++|+++|+|+||+| |+++|+++|+++++++. ....+.+||++++| ++|+++||++|++++|+|+||||++|+|+|
T Consensus 678 A~~Aa~~V~VeYe~l~~~v~d~~~Al~~~a~~~-~~~~~~~Gdv~~af--~~a~~vve~~y~~~~~~H~~mEp~~~~A~~ 754 (1330)
T TIGR02969 678 AKQAAKHVKIVYRDLEPLILTIEEAIQHKSFFE-PERKLEYGNVDEAF--KVVDQILEGEIHMGGQEHFYMETQSMLVVP 754 (1330)
T ss_pred HHHHhcCCEEEEecCCCCcCCHHHHhcCCCEec-ccccccCCchhhhh--ccCCEEEEEEEEECCEeecccCCCEEEEEE
Confidence 999999999999999 56799999999887554 23446889999999 999999999999999999999999999999
Q ss_pred ecCCCeEEEEeCCCChHHHHHHHHHHhCCCCCcEEEEecccCCCCCCCCCcchHHHHHHHHHHHhCCCCEEEEechHHHH
Q 000805 698 MDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKETRSAFIAAAAAVPSFLLNRPVNLTLDRDIDM 777 (1276)
Q Consensus 698 ~~~~g~l~V~~stQ~p~~~r~~vA~~Lglp~~kV~V~~~~vGGgFGgK~~~~~~~a~~aAlaA~~~grPVkl~~tR~ed~ 777 (1276)
+.++|+|+||+|||+|+.+|..||++||||.+||||+++++|||||+|.+....+++.||++|+++||||||+|||+|+|
T Consensus 755 ~~~~g~l~V~~stQ~p~~~r~~vA~~Lglp~~kVrV~~~~vGGgFG~K~~~~~~~~~~aA~aA~~~gRPVk~~~sR~e~~ 834 (1330)
T TIGR02969 755 KGEDQEMDVYVSTQFPKYIQDIVAATLKLPVNKVMCHVRRVGGAFGGKVGKTSIMAAITAFAANKHGRAVRCTLERGEDM 834 (1330)
T ss_pred eCCCCeEEEEECCcCHHHHHHHHHHHhCCCHHHeEEEeCCcccCcccccccccHHHHHHHHHHHHhCCCEEEEecHHHHh
Confidence 84457899999999999999999999999999999999999999999998644457899999999999999999999999
Q ss_pred hhcCCCCCeEEEEEEEECCCCcEEEEEEEEEecCCCCCCchHHHHHHHhhccCCCcccCeEEEEEEEEecCCCCCCcccC
Q 000805 778 MISGQRHSFLGKYKVGFTNEGKVLALDLEIYNNAGNSLDLSLAVLERAMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRG 857 (1276)
Q Consensus 778 ~~~~~R~~~~~~~k~g~~~dG~i~a~~~~~~~d~Ga~~~~~~~v~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~~a~Rg 857 (1276)
+.+++||++.++||+|+|+||+|++++++++.|+|+|.+.+..++.+++.++.++|+|||++++++.|+||+||+++|||
T Consensus 835 ~~~~~R~~~~~~~k~g~~~dG~i~a~~~~~~~d~Ga~~~~~~~v~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~~a~RG 914 (1330)
T TIGR02969 835 LITGGRHPYLGKYKAGFMNDGRIVALDVEHYSNGGSSLDESLWVIEMGLLKMDNAYKFPNLRCRGWACRTNLPSNTAFRG 914 (1330)
T ss_pred hhcCCcCceEEEEEEEECCCCCEEEEEEEEEEecccccCcchHHHHHHHHhcCCCccCCcEEEEEEEEECCCCCCCccCC
Confidence 99999999999999999999999999999999999999888777788888899999999999999999999999999999
Q ss_pred CChhhhHhHHHHHHHHHHHHcCCCHHHHHHHhcCCCCCccccCccccCCCHHHHHHHHHHhCCChhhHHhHhhhhccCCc
Q 000805 858 FGGPQGMLITENWIQRVAVEVRKSPEEIREINFQGEGSILHYGQQLQHCTLFPLWNELKLSCDFLNARKEVDNFNLNNRW 937 (1276)
Q Consensus 858 ~G~~q~~fa~E~~md~lA~~lg~DP~e~R~~Nl~~~g~~~~~g~~~~~~~l~~~l~~~~~~~~~~~r~~~~~~fn~~~~~ 937 (1276)
||.+|++|++|++||++|++|||||+|||++|++++|+.++++++++++.+++||+++++.++|++|+++++.||+.++|
T Consensus 915 ~G~~q~~fa~E~~mD~lA~~lg~DP~e~R~~N~~~~gd~~p~~~~~~~~~~~~~l~~~~~~~~~~~r~~~~~~~~~~~~~ 994 (1330)
T TIGR02969 915 FGFPQAGLITEACITEVAAKCGLSPEKVRTINMYKEIDQTPYKQEINAKNLFQCWRECMAKSSYSERKVAVEKFNAENYW 994 (1330)
T ss_pred CchHHHHHHHHHHHHHHHHHHCcCHHHHHHHhCCCCcccCCCCcccCCCcHHHHHHHHHHhcCHHHHHHHHHHHhccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999998888889988999
Q ss_pred cccceEEEeeeeccccccccCCceeEEEEEecCCeEEEEEcCccCCcchHHHHHHHHHHHhCCCcccEEEecCCCCCCCC
Q 000805 938 KKRGIAMVPTKFGISFTLKLMNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETSTDKVPN 1017 (1276)
Q Consensus 938 ~~rGia~~~~~~g~~~~~~~~~~~~a~V~l~~DGsV~V~~g~~e~GqG~~T~~~qiaAe~Lgip~~~V~v~~~dT~~~p~ 1017 (1276)
++||+++++..|+++++....+++++.|+|+.||+|+|.+|++|||||++|+++||||++||||+|+|+|..+||+.+|+
T Consensus 995 ~~rGiG~a~~~~~~~~~~~~~~~~~a~v~i~~DGsV~V~~G~~e~GQG~~T~~aQiaAe~LGip~e~V~v~~~DT~~~p~ 1074 (1330)
T TIGR02969 995 KKRGLAVIPLKFPVGLGSVAMGQAAALVHIYLDGSVLVTHGGIEMGQGVHTKMIQVVSRELKMPMSNVHLRGTSTETVPN 1074 (1330)
T ss_pred eEEEEEEEEEEeccccccCCCCCccEEEEEcCCceEEEEECCcCcCCChHHHHHHHHHHHhCCCHHHEEEEcCCCCCCCC
Confidence 99999999999998775444568899999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccchhhhHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHhhccCcceeEEEEeecCCccccccCCCCCCcccc
Q 000805 1018 ASPTAASASSDIYGAAVLDACEQIKARMEPIASKHNFNSFAELASACYVQRIDLSAHGFYITPEIDFDWITGKGNPFRYF 1097 (1276)
Q Consensus 1018 ~~~t~~Sr~t~~~g~Av~~Ac~~l~~rl~~~~~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~ 1097 (1276)
+++|+|||+|+++|+||++||++|++||.++++..+..+|.+++..++..+++|.+.++|..+...+++....+.++.||
T Consensus 1075 ~~gt~gSr~t~~~G~Av~~A~~~l~~rl~~~aa~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 1154 (1330)
T TIGR02969 1075 TNASGGSVVADLNGLAVKDACQTLLKRLEPIISKNPQGTWKDWAQTAFDQSISLSAVGYFRGYESNINWEKGEGHPFEYF 1154 (1330)
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCHHHHHHhhccCCCceEEEEEecCCcccccccCcCCCCcccc
Confidence 99999999999999999999999999999998776778999999777766788999998866555555654444566689
Q ss_pred cEEEEEEEEEeeCCCCcEEEeEEEEEEecCcccChhhhhhhhhhHHHHHHHHHhcceEEecCCCCccCCCCccccCCCCC
Q 000805 1098 TYGAAFAEVEIDTLTGDFHTRMANVILDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPGCLYTCGPGS 1177 (1276)
Q Consensus 1098 ~~ga~~~eVEVD~~TG~v~V~r~~~v~D~G~~iNP~~~~gQieGg~~qGlG~al~Ee~~~d~~~~~~~~~G~~~t~~~~~ 1177 (1276)
+||+|++|||||++||+++|+|+++++|||++|||.+++|||||||+||||++|+||+.|| ++|+++|++|++
T Consensus 1155 ~~ga~~aeVEVD~~TG~v~vlr~~~v~D~G~~INP~~~~GQieGg~vqGiG~al~Ee~~yd-------~~G~~lt~~~~d 1227 (1330)
T TIGR02969 1155 VYGAACSEVEIDCLTGDHKNIRTDIVMDVGHSINPALDIGQVEGAFIQGMGLYTIEELSYS-------PQGILYSRGPNQ 1227 (1330)
T ss_pred ceeeEEEEEEEecCCCCEEEEEEEEEEeCCcccCHHHHhHhHHHHHHHHHHHHHcceeEEC-------CCCCCCCCCccc
Confidence 9999999999999999999999999999999999999999999999999999999999998 689999999999
Q ss_pred CCCCCCCCCCCccEEEEecCCCCCCCCCCCCcCCCCCccchhhHHHHHHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHh
Q 000805 1178 YKIPSLNDVPLKFNVSLLKGHPNVKAIHSSKAVGEPPFFLASSVFFAIKDAISAARADAGHTGWFPLDNPATPERIRMAC 1257 (1276)
Q Consensus 1178 Y~iP~~~diP~~~~v~~~~~~~~~~~~~gaKgvGE~~~~~~~~v~~Ai~nAi~~A~~~~G~~~~~~~~~P~Tpe~i~~a~ 1257 (1276)
|+||++.|||.+|+|.++++.+++.+|||+||+||+|+++++++++||+|||++|+++.|++++|++++|+|||+||++|
T Consensus 1228 Y~iPt~~DiP~~~~v~~~~~~~~~~~p~GaKGvGE~~~~~a~~v~~AI~nAI~~A~g~~g~~~~~~~~~P~Tperv~~al 1307 (1330)
T TIGR02969 1228 YKIPAICDIPTELHISFLPPSEHSNTLYSSKGLGESGVFLGCSVFFAIHDAVRAARQERGLSGPWKLTSPLTPEKIRMAC 1307 (1330)
T ss_pred ccCCchhhcCCCEEEEEEeCCCCCCCCCccccCcccccccCccHHHHHHHHHHHHHhhcCCCcCccCCCCCCHHHHHHHh
Confidence 99999999995599999985478899999999999999987789999999999999888887888999999999999999
Q ss_pred cccccccccC--CCCCCCCC
Q 000805 1258 LDEFTAPFIN--SEYRPKLS 1275 (1276)
Q Consensus 1258 ~~~~~~~~~~--~~~~~~~~ 1275 (1276)
.+++++.+.. ..+..+|+
T Consensus 1308 ~~~~~~~~~~~~~~~~~~~~ 1327 (1330)
T TIGR02969 1308 EDKFTKMIPRDEPGSYVPWN 1327 (1330)
T ss_pred hhhHHHhhhccCccCCccce
Confidence 9999887554 33444454
No 3
>KOG0430 consensus Xanthine dehydrogenase [Nucleotide transport and metabolism]
Probab=100.00 E-value=3.1e-251 Score=2240.82 Aligned_cols=1167 Identities=55% Similarity=0.896 Sum_probs=1080.0
Q ss_pred ccccccC---CCceecCCC-------CcHHHHHHHHcCCCCCCCCChHHHHHHHHHHHcCC-CCCCHHHHHHHccCcccc
Q 000805 2 ACIQFNA---NKLLTSLDL-------RYVLQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQ-TPPTEEQIEESLAGNLCR 70 (1276)
Q Consensus 2 ~c~~~~~---~~~~~t~~~-------~~~~q~~~~~~~~~qCg~Ctpg~v~~~~~~l~~~~-~~~~~~~i~~~~~gnlCr 70 (1276)
||++|+. |+.|+|+|+ +||||++|++.||+||||||||||||||+||+|.+ .| |.+||+++|+|||||
T Consensus 68 sCLt~l~s~~g~~VtT~EGlGn~~~g~HPiq~RlA~~hgsQCGFCtPG~vmsmYalL~n~~~~~-T~~eie~a~~GNLCR 146 (1257)
T KOG0430|consen 68 SCLTLLNSVHGLEVTTSEGLGNRRDGYHPIQERLAKMHGSQCGFCTPGFVMSMYALLRNSKNSP-TMEEIENAFGGNLCR 146 (1257)
T ss_pred hhhhhcccccceEEEeeecccccccCcCcHHHHHhhccCCcccCCCccHHHHHHHHHHhCCCCC-CHHHHHHhhccceee
Confidence 8999999 899999997 79999999999999999999999999999999988 66 999999999999999
Q ss_pred CCCCHhHHHHHHHHHhccccccccccccCcCCCccccCCCCCCCCCCCCCCCCCCccccccccCCCccccccccCCCCcC
Q 000805 71 CTGYRPIVDAFRVFAKTNDALYTNMSSMSLKEGEFVCPSTGKPCSCGMKNVSNADTCEKSVACGKTYEPVSYSEIDGSTY 150 (1276)
Q Consensus 71 Ctgy~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (1276)
|||||||+||+|+|+.+.+ ||... ....|.+ ..+ .+...+ ++|
T Consensus 147 CTGYRPIldA~kSFa~d~~----------------~~~~g-~~~~~~~-----------------~~~--~~~~~~-~~~ 189 (1257)
T KOG0430|consen 147 CTGYRPILDAMKSFAVDSD----------------ICGPG-CDGFSIA-----------------EEK--DIEDLS-PPY 189 (1257)
T ss_pred ecCCchHHHHHhhhccCCC----------------ccccC-ccccccc-----------------ccc--cccccc-CCC
Confidence 9999999999999997743 33221 0012211 012 455667 999
Q ss_pred Ccc-ccCCchhhhhcCCCCcccccCCCeEEEecCCHHHHHHHHhcCCCcEEEEccchhhHHHHhCcCCCCeEEeCCCCCC
Q 000805 151 TEK-ELIFPPELLLRKSNPLNLSGFGGLKWYRPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPE 229 (1276)
Q Consensus 151 ~~~-~~~~p~~l~~~~~~~~~~~~~~~~~~~~P~sl~eal~ll~~~~~a~lvaGgTdl~v~~~~~~~~~~~lIdl~~i~E 229 (1276)
||+ ++||||+|+.. .+...+ +.++.+|++|.||+|++++|+++|++++|+|||..+++++.+. ++++||+++|+|
T Consensus 190 dp~~~~i~~pe~~~~-~~~~~~-~~~~~~W~~P~sl~eL~~~~~~~~~~~Lv~GNT~~gv~~r~~~--~~~~Id~~~v~e 265 (1257)
T KOG0430|consen 190 DPKKELIFPPELLKR-KKTTLL-GNDGIRWYWPVSLEELFELKANKPDAKLVAGNTAHGVYRRSPD--YQKFIDVSGVPE 265 (1257)
T ss_pred CCccCcccChHHhcc-cccccc-CCCCcEEeCcccHHHHHHHHhcCcceEEEeccccceEEeccCC--CcceechhcCch
Confidence 999 99999999866 333444 6678999999999999999999999999999999999988876 799999999999
Q ss_pred CccEEEcCCeEEEcccccHHHHHHHhhhhhhcCCccchhhHHHHHHHHHhhcCcccceeeeecccccccCC----CCCHH
Q 000805 230 LNVLNVKDDGLEIGAAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASP----ISDLN 305 (1276)
Q Consensus 230 L~~I~~~~~~l~IGA~vTl~~l~~~l~~~~~~~~~~~~~~~~~L~~~~~~ias~qIRN~aTiGGNi~~asp----~sD~~ 305 (1276)
|+.++.++++|+|||++||+++++.+++.+. .+. .++|+.+.+|+++||++||||.|||||||+.++| +||++
T Consensus 266 l~~~~~~~~gi~lGa~~sls~~~~~l~~~~~-~~~--~~~~~~~~~hl~~~A~~~IRN~atigGnI~~~~~~~~f~SDl~ 342 (1257)
T KOG0430|consen 266 LKALNVDDNGLELGAALSLSETMELLRKLVK-RPG--FEYFKALWEHLKWFANVQIRNVGTIGGNICTKAQSPEFPSDLF 342 (1257)
T ss_pred hhhcccCCCceEEcccccHHHHHHHHHHHHh-CcH--HHHHHHHHHHHHHhcccceeccccccceeEeccCCCCCchhHH
Confidence 9988889999999999999999999987776 432 3799999999999999999999999999999998 99999
Q ss_pred HHHHHcCCEEEEEeCCCcEEEEEhHhHhccCccccCCCceEEEEEEccCCCCCccEEEEEEeccCcccccccceEEEEEE
Q 000805 306 PLWMASGAKFHIVDCKGNIRTTMAEEFFLGYRKVDLTSGEILLSIFLPWTRPFEFVKEFKQAHRRDDDIALVNAGMRVYL 385 (1276)
Q Consensus 306 p~Llal~A~v~l~s~~g~~R~vpl~~F~~g~~~t~L~~~Eii~~I~iP~~~~~~~~~~~K~~~R~~~d~a~v~~A~~~~~ 385 (1276)
|+|+|+||+|++.+..++..++ ||.+|+++.|.+.|||.+|+||...+ +|.+||+++|+++|+|+||++|+..+
T Consensus 343 ~~l~a~~a~v~~~~~~~~~~~~----~l~~y~~~~l~~~~illsv~ip~~~~--~f~~~k~a~R~e~a~a~vNa~fl~e~ 416 (1257)
T KOG0430|consen 343 ILLEALDAKVTILNNSGDLEKV----FLEEYLGSSLGAKEILLSVVLPASRK--YFESYKQAPRRENAIAYVNAAFLAEV 416 (1257)
T ss_pred HHHHhhccEEEEeecCCcccee----eHhhhhccccCcceEEEEEEccCcHH--HHHHHHhcccccchhhhhhHHhhhcc
Confidence 9999999999999987744444 44555577899999999999999876 88899999999999999999877654
Q ss_pred ecCCcceEEEEEEEEEecCCCcceeHHHHHHHhcCCCCCHHHHHHHHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q 000805 386 EEKDEEWVVSDALLVYGGVAPLSLSAKKTKTFIVGKSWSQELLQNALKILQTDIILKEDAPGGMVDFRKSLTLSFFFKFF 465 (1276)
Q Consensus 386 ~~~~~~~~i~~~ria~Ggv~~~p~ra~~~E~~L~Gk~~~~~~l~~a~~~l~~e~~~~~~~~~~s~~YR~~la~~l~~r~l 465 (1276)
+ +|+++||+|||++|..+++.++|+.|.|+.|+++++++|+..|.+++.|+. |+++.+||+.||.+||+|||
T Consensus 417 ~------~V~~~~i~fGg~~p~~i~a~~~~~~~~gk~~~~~ll~~a~~lL~~~l~~~~--p~~~~~yR~~La~sfffKF~ 488 (1257)
T KOG0430|consen 417 G------KVSSARICFGGIAPDFIHAKKTEELLLGKPWEEELLEDAFGLLQSDLVPDE--PGGMPEYRKKLALGFFFKFL 488 (1257)
T ss_pred c------eeeeeeEeecCcCcchhhhhhHHHHhhcccccHHHHHHHHHhhhhhccCCC--CCCcHHHHHHHHHHHHHHHH
Confidence 3 799999999999999999999999999999999999999999999998766 68999999999999999999
Q ss_pred HHHHHhhcCCCCCccCCCCccccccccccCCCccccccccccCCCCcCCCcccccCccccccceeEecccCCCCCCcEEE
Q 000805 466 LWVSHQMEGKNSIKESVPSTHLSAMQSFHRPSIIGNQDYEITKHGTSVGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHA 545 (1276)
Q Consensus 466 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~q~~~~~~~~~~vGk~~~r~d~~~kvtG~a~Y~~Di~~~~gmL~a 545 (1276)
+.+.+.++. .....++.....+|++++.|.|.+..+.++||+|+.++.+..|+||||.|+|||+.+++.||+
T Consensus 489 l~~~~~~~~--------~~~~~~g~~~~~~~~ls~~Q~~~~~q~~~pVG~pi~~~~a~~qaSGEAvY~dDip~~~n~lh~ 560 (1257)
T KOG0430|consen 489 LKVAHKVKN--------GNKFITGGSLLARPLLSGGQQFETTQEHYPVGRPVEKLEALIQASGEATYVDDIPTPPNTLHA 560 (1257)
T ss_pred HHHhhhccc--------cCCccCCCccccccccccceeecCCCCCCcCcchhhhhhhhhhcccceEEecCCCCCCCeeEE
Confidence 999987742 123444556677898989999987777999999999999999999999999999999999999
Q ss_pred EEEeCCCCCeEEEEeeCccccCCCCEEEEEecCCCCCCCC--CCC--CCCcccccccCeEeecCCeEEEEEECCHHHHHH
Q 000805 546 ALVLSRRPHARILSIDDSGARSSPGFVGIFFAEDVQGDNR--IGP--VVADEELFASEVVTCVGQVIGVVVAETHEEAKL 621 (1276)
Q Consensus 546 ~~vrSp~a~a~I~sID~s~A~~~pGV~~vvt~~Dipg~n~--~~~--~~~d~~~~a~~~V~y~GqpVa~VvAet~~~A~~ 621 (1276)
+||.|+++||+|+|||+|+|+++|||+++++++|+|+.|. ++. ...|+++||+++|+|+|||||+|||+|.++|++
T Consensus 561 aFV~St~p~A~I~sID~seAl~~~GVv~~~~akDiPg~n~~~i~~~~~~~de~lFA~~~v~~~GQ~ig~ivAdt~~~A~r 640 (1257)
T KOG0430|consen 561 AFVLSTKPHAKILSIDASEALKLPGVVAFFSAKDIPGNNMKNIGNMFFPEDEELFATDVVTCVGQPIGVIVADTHELAKR 640 (1257)
T ss_pred EEEEcccCCcEEeeecchhhcCCCceEEEEecccCCCCCccccccccCCCccceeecceeEEcCcEEEEEEeCCHHHHHH
Confidence 9999999999999999999999999999999999999883 322 257899999999999999999999999999999
Q ss_pred hcccceeeEeec-CCCCCHHHHHhcCCCCCCCcceeecCCcccccccCCCccEEEEEEEeCcccccCCCCCeeEEEEecC
Q 000805 622 ASRKVQVEYEEL-PAILSIQEAIDAKSFHPNTERCFRKGDVDICFQSGQCDKIIEGEVRVGGQEHFYLEPHSSVVWTMDH 700 (1276)
Q Consensus 622 Aa~~V~V~ye~l-p~v~~~~~A~~~~s~~~~~~~~~~~Gd~~~af~~~~a~~vve~~~~~~~~~H~~mEp~~~~a~~~~~ 700 (1276)
||++|+|+|+++ |++++++||+++.++++ ....++.+++.+.|...++|.++|++++++.|+|||||||+++|+|+ |
T Consensus 641 AA~lVkv~Y~~l~p~I~t~e~Ai~~~s~~~-~~~~~~~~~~~~~~~~~~~d~i~~Ge~~mG~QeHFYmEtQttl~vP~-e 718 (1257)
T KOG0430|consen 641 AAKLVKVEYEELPPPILPSEDAVKDKSLSE-TEPRLRKGDVGKSFQLEECDKILEGELDMGGQEHFYMEPQTTLVVPF-E 718 (1257)
T ss_pred hhhceEEEeccCCCceecHHHHHhhhcccC-CCccccccCccccccccccceeEEEEEEecceeEEEeccceeEEeec-C
Confidence 999999999999 67999999999988766 45667777776666335679999999999999999999999999998 3
Q ss_pred CCeEEEEeCCCChHHHHHHHHHHhCCCCCcEEEEecccCCCCCCCCCcchHHHHHHHHHHHhCCCCEEEEechHHHHhhc
Q 000805 701 GNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKETRSAFIAAAAAVPSFLLNRPVNLTLDRDIDMMIS 780 (1276)
Q Consensus 701 ~g~l~V~~stQ~p~~~r~~vA~~Lglp~~kV~V~~~~vGGgFGgK~~~~~~~a~~aAlaA~~~grPVkl~~tR~ed~~~~ 780 (1276)
| +|+||+|||||..+|..||++||||.|||+|+++|+|||||||.+++..+|++|||+|+|++||||++++|++||.++
T Consensus 719 ~-el~v~~STQ~~~~tQ~~VA~~Lgipa~~V~v~trRvGGGFGGK~trs~~VA~a~ALaA~Kl~RPvr~~l~r~~dM~it 797 (1257)
T KOG0430|consen 719 G-ELQVYSSTQWPDFTQSVVAHVLGLPANKVQVKTRRLGGGFGGKETRSNPVAAAAALAAYKLNRPVRFVLSRESDMIIT 797 (1257)
T ss_pred C-eEEEEEcCcCcHHHHHHHHHHhCCCccceEEEEEeeccccccccccccHHHHHHHHHHHHhCCCEEEEecchhhhhhc
Confidence 4 899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCeEEEEEEEECCCCcEEEEEEEEEecCCCCCCchHHHHHHHhhccCCCcccCeEEEEEEEEecCCCCCCcccCCCh
Q 000805 781 GQRHSFLGKYKVGFTNEGKVLALDLEIYNNAGNSLDLSLAVLERAMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGG 860 (1276)
Q Consensus 781 ~~R~~~~~~~k~g~~~dG~i~a~~~~~~~d~Ga~~~~~~~v~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~~a~Rg~G~ 860 (1276)
|+|||+..+||+|+++||||+|+++++|.|+|++.|+|+.++ +++.+++++|+|||+|+++++|+||.|++|||||||.
T Consensus 798 G~Rhp~~~~Ykvgf~~~GkI~aL~~~~~~naG~s~d~S~~~~-~~~~~~~n~Y~~~~~r~~G~~ckTN~pSnTa~Rg~G~ 876 (1257)
T KOG0430|consen 798 GKRHPFHGKYKVGFKSDGKILALDLEFYENAGWSKDESPSVL-RAMFHSDNVYEIGDVRFDGYVCKTNLPSNTAFRGPGS 876 (1257)
T ss_pred CCccceEEeEEEEEccCCeEEEEehhhhhccCCCcCcchHHH-hhhhhhhheecccceeeeeeEEecCCCCcchhcCCCC
Confidence 999999999999999999999999999999999999999888 8999999999999999999999999999999999999
Q ss_pred hhhHhHHHHHHHHHHHHcCCCHHHHHHHhcCCCCCccccCccccCCCHHHHHHHHHHhCCChhhHHhHhhhhccCCcccc
Q 000805 861 PQGMLITENWIQRVAVEVRKSPEEIREINFQGEGSILHYGQQLQHCTLFPLWNELKLSCDFLNARKEVDNFNLNNRWKKR 940 (1276)
Q Consensus 861 ~q~~fa~E~~md~lA~~lg~DP~e~R~~Nl~~~g~~~~~g~~~~~~~l~~~l~~~~~~~~~~~r~~~~~~fn~~~~~~~r 940 (1276)
||++++.|++|.++|.++|+||.|+|++|++++|+.+++++.++.+.+++||+++.+.++|++|+.++++||++|+||||
T Consensus 877 pQG~~i~E~iie~VA~~~g~d~eeVR~~N~y~eg~~~~~~~~~~~~~l~~~w~~~~~sS~y~~Rk~ev~~FN~~N~WrKR 956 (1257)
T KOG0430|consen 877 PQGILITENIIERIAFELGKDPEEVRKINFYVEGSLTYYHGELQHCTLPQLWPECLVSSKFEKRKSEIEEFNKENRWKKR 956 (1257)
T ss_pred hhhHHHHHHHHHHHHHHhCCCHHHHhhhhhhhcccccccCCCcccCcHHHHHHHHHHhchHHHHHHHHHHhhhcChhhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEeeeeccccccccCCceeEEEEEecCCeEEEEEcCccCCcchHHHHHHHHHHHhCCCcccEEEecCCCCCCCCCCC
Q 000805 941 GIAMVPTKFGISFTLKLMNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETSTDKVPNASP 1020 (1276)
Q Consensus 941 Gia~~~~~~g~~~~~~~~~~~~a~V~l~~DGsV~V~~g~~e~GqG~~T~~~qiaAe~Lgip~~~V~v~~~dT~~~p~~~~ 1020 (1276)
||+++|++||+++.. ++.|.|+||.||||.|.|||+|||||++|||+|+||+.||||++.|++.++||+.+||+++
T Consensus 957 Gi~~vp~~f~i~~~~----~~~a~V~Iy~DGSV~v~hgGiEmGQGL~TK~~Qvaa~~l~ip~~~v~v~~tsT~~v~na~~ 1032 (1257)
T KOG0430|consen 957 GLAMVPMKFGISFTG----QAPALVHIYTDGTVVVTHGGIEMGQGLNTKVAQVAAYALGIPLSSVFVSETSTDKVPNASP 1032 (1257)
T ss_pred CceEeeeecceeccC----CCceEEEEEcCCeEEEEECcEEcccchhHHHHHHHHHHhCCcccceEEeecccccccCCCc
Confidence 999999999999864 3789999999999999999999999999999999999999999999999999999999999
Q ss_pred CccchhhhHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHhhccCcceeEEEEeecCCccccccCCCCCCcccccEE
Q 000805 1021 TAASASSDIYGAAVLDACEQIKARMEPIASKHNFNSFAELASACYVQRIDLSAHGFYITPEIDFDWITGKGNPFRYFTYG 1100 (1276)
Q Consensus 1021 t~~Sr~t~~~g~Av~~Ac~~l~~rl~~~~~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g 1100 (1276)
|+||.+++++|.||++||++|.+||+|++++++..+|+|++.+||.+.++|+++.+|+ +.|+++.|++||
T Consensus 1033 Ta~S~~Sd~~g~AV~~~C~~l~~RL~Pv~~k~~~~tw~~~i~~AY~q~V~LsAs~~~~----------~~g~~~~Y~~yG 1102 (1257)
T KOG0430|consen 1033 TAASVSSDMYGAAVLDACETINARLEPVKSKHNFNTWEELIQAAYGQSINLSASDWYK----------PEGDMFPYLTYG 1102 (1257)
T ss_pred cccccccccccHHHHHHHHHHHHhhhhhhhhcCCccHHHHHHHHhhCccceeeecccc----------CCCCcccceecc
Confidence 9999999999999999999999999999999888999999999999999999986654 347889999999
Q ss_pred EEEEEEEeeCCCCcEEEeEEEEEEecCcccChhhhhhhhhhHHHHHHHHHhcceEEecCCCCccCCCCccccCCCCCCCC
Q 000805 1101 AAFAEVEIDTLTGDFHTRMANVILDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPGCLYTCGPGSYKI 1180 (1276)
Q Consensus 1101 a~~~eVEVD~~TG~v~V~r~~~v~D~G~~iNP~~~~gQieGg~~qGlG~al~Ee~~~d~~~~~~~~~G~~~t~~~~~Y~i 1180 (1276)
++++|||||++||+++|+|+|+++|||.+|||++|+|||||+|+||+|++++||+.|| ++|.++|+++|+|||
T Consensus 1103 ~a~sEVEID~LTG~~~ilRtDIv~D~G~SLNPaIDIGQIEGAFvQGlG~~t~Eel~~~-------~~G~l~t~gt~~YKi 1175 (1257)
T KOG0430|consen 1103 AAASEVEIDTLTGDTEVLRVDILYDCGESLNPAIDIGQIEGAFVQGLGLVTLEELIYD-------PEGSLLTNGTWTYKI 1175 (1257)
T ss_pred ceeEEEEEEEecCcceEEEEEEeeecccccCcccccchhhhHHHhchhhhhhhhheeC-------CCceEeecCCCcccC
Confidence 9999999999999999999999999999999999999999999999999999999999 469999999999999
Q ss_pred CCCCCCCCccEEEEecCCCCCCCCCCCCcCCCCCccchhhHHHHHHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHhccc
Q 000805 1181 PSLNDVPLKFNVSLLKGHPNVKAIHSSKAVGEPPFFLASSVFFAIKDAISAARADAGHTGWFPLDNPATPERIRMACLDE 1260 (1276)
Q Consensus 1181 P~~~diP~~~~v~~~~~~~~~~~~~gaKgvGE~~~~~~~~v~~Ai~nAi~~A~~~~G~~~~~~~~~P~Tpe~i~~a~~~~ 1260 (1276)
|+++|||.+|+|.++...||+.+.|+||++||||++++++|++||++||.+||+ .||.++.|+|||+|+++|.++
T Consensus 1176 P~~~dIP~~FrV~LL~~~pn~~~v~sSKA~GEPPl~La~sv~fAi~~Ai~aAR~-----~~f~L~~PaTpe~i~~~c~~~ 1250 (1257)
T KOG0430|consen 1176 PGAKDIPKDFRVELLNKNPNKAGVMSSKATGEPPLFLAASVFFAIRQAIKSARK-----DWFRLEAPATPERIRLACGDE 1250 (1257)
T ss_pred CCcccCchheEeeeccCCCCccceeeccccCCChHHHHHHHHHHHHHHHHHHhh-----ccccCCCCCCHHHHHHhhcch
Confidence 999999999999999556999999999999999999999999999999999986 289999999999999999999
Q ss_pred ccccc
Q 000805 1261 FTAPF 1265 (1276)
Q Consensus 1261 ~~~~~ 1265 (1276)
+++.+
T Consensus 1251 ~~~~~ 1255 (1257)
T KOG0430|consen 1251 FSEFK 1255 (1257)
T ss_pred hhhhc
Confidence 98764
No 4
>PLN00192 aldehyde oxidase
Probab=100.00 E-value=5.5e-242 Score=2351.90 Aligned_cols=1185 Identities=32% Similarity=0.526 Sum_probs=1053.8
Q ss_pred ccccccC---CCceecCCC-------CcHHHHHHHHcCCCCCCCCChHHHHHHHHHHHcC-----CC------CCCHHHH
Q 000805 2 ACIQFNA---NKLLTSLDL-------RYVLQESLVRSHGSQCGFCTPGFIMSMYSLLRSS-----QT------PPTEEQI 60 (1276)
Q Consensus 2 ~c~~~~~---~~~~~t~~~-------~~~~q~~~~~~~~~qCg~Ctpg~v~~~~~~l~~~-----~~------~~~~~~i 60 (1276)
||++|+. |++|+|+|+ +||||++|+++|++||||||||||||||+||+++ +. +++++||
T Consensus 72 sCl~~~~~~~g~~i~TvEgl~~~~~~lhpvq~a~~~~~~~QCGfCtpG~vms~~~ll~~~~~~~~~~p~~~~~~~~~~~i 151 (1344)
T PLN00192 72 SCLTLLCSVNGCSITTSEGLGNSKDGFHPIHKRFAGFHASQCGFCTPGMCISLFSALVNADKTDRPEPPSGFSKLTVVEA 151 (1344)
T ss_pred hHHHHHHHhCCCEEEeecCcCCCCCCCCHHHHHHHHcCCCccCCCChHHHHHHHHHHHhcccccCCCcccccCCCCHHHH
Confidence 8999998 899999997 6999999999999999999999999999999662 23 2389999
Q ss_pred HHHccCccccCCCCHhHHHHHHHHHhccccccccccccCcCCC-ccccCCCCCCCCCCCCCCCCCCccccccccCCCccc
Q 000805 61 EESLAGNLCRCTGYRPIVDAFRVFAKTNDALYTNMSSMSLKEG-EFVCPSTGKPCSCGMKNVSNADTCEKSVACGKTYEP 139 (1276)
Q Consensus 61 ~~~~~gnlCrCtgy~~i~~a~~~~~~~~~~~~~~~~~~~~~~~-~~~c~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~ 139 (1276)
+++|+||||||||||||++|+++++.+.+ ++++ .+||++++ .| . +
T Consensus 152 ~~~l~gnlCRCtgY~~i~~a~~~~~~~~~----------~~~~~~~~~~~~~---~~-~-----~--------------- 197 (1344)
T PLN00192 152 EKAVSGNLCRCTGYRPIVDACKSFAADVD----------IEDLGLNSFWKKG---ES-E-----E--------------- 197 (1344)
T ss_pred HHHhcCCceeCCCCHHHHHHHHHHHhhcc----------chhcccccccccC---Cc-c-----h---------------
Confidence 99999999999999999999999987632 2222 13565421 01 0 0
Q ss_pred cccccCCCCcCCcc-cc-CCchhhhhc--CCCCcccccCCCeEEEecCCHHHHHHHHhcCC----CcEEEEccchhhHHH
Q 000805 140 VSYSEIDGSTYTEK-EL-IFPPELLLR--KSNPLNLSGFGGLKWYRPLKLQHLLELKSKYP----DSKLLVGNTEVGIEM 211 (1276)
Q Consensus 140 ~~~~~~~~~~~~~~-~~-~~p~~l~~~--~~~~~~~~~~~~~~~~~P~sl~eal~ll~~~~----~a~lvaGgTdl~v~~ 211 (1276)
...++|++|+++ ++ +| |+|+.. ....+.+ . ++++|++|+||+||+++|+++| ++++||||||++++
T Consensus 198 --~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~-~~~~~~~P~sl~ea~~ll~~~~~~~~~a~lvAGgTdl~~~- 271 (1344)
T PLN00192 198 --AKLSKLPPYNHSDHICTF-PEFLKKEIKSSLLLD-S-SRYRWYTPVSVEELQSLLESNNFDGVSVKLVVGNTGTGYY- 271 (1344)
T ss_pred --hhhhhcccCCCccccccC-hhhhhcccCccceec-C-CCceEECcCCHHHHHHHHHhCCCCCCCeEEEEeCCcceee-
Confidence 012478899998 77 77 777643 2233444 3 5789999999999999999995 89999999999884
Q ss_pred HhCcCCCCeEEeCCCCCCCccEEEcCCeEEEcccccHHHHHHHhhhhhhcCCccchhhHHHHHHHHHhhcCcccceeeee
Q 000805 212 RLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASV 291 (1276)
Q Consensus 212 ~~~~~~~~~lIdl~~i~EL~~I~~~~~~l~IGA~vTl~~l~~~l~~~~~~~~~~~~~~~~~L~~~~~~ias~qIRN~aTi 291 (1276)
+. ...|+++|||++|+||+.|+.++++|+|||+|||+++++.+... ..+. .+||.|.+++++|||+||||+|||
T Consensus 272 k~-~~~p~~lIdi~~I~EL~~I~~~~~~l~IGA~vTl~el~~~l~~~--~~~~---~~~p~L~~~~~~vAs~qIRN~aTl 345 (1344)
T PLN00192 272 KD-EELYDKYIDIRHIPELSMIRRDEKGIEIGAVVTISKAIEALREE--SKSE---YVFKKIADHMEKIASRFVRNTGSI 345 (1344)
T ss_pred ec-cCCCCeEEEcCCChhhhcEEecCCEEEEeecCcHHHHHHHHHhh--cccc---chHHHHHHHHHHhcChhhccceec
Confidence 43 66789999999999999999999999999999999999876433 1111 168999999999999999999999
Q ss_pred cccccccCC---CCCHHHHHHHcCCEEEEEeCCCcEEEEEhHhHhccCccccCCCceEEEEEEccCCC------CCccEE
Q 000805 292 GGNICTASP---ISDLNPLWMASGAKFHIVDCKGNIRTTMAEEFFLGYRKVDLTSGEILLSIFLPWTR------PFEFVK 362 (1276)
Q Consensus 292 GGNi~~asp---~sD~~p~Llal~A~v~l~s~~g~~R~vpl~~F~~g~~~t~L~~~Eii~~I~iP~~~------~~~~~~ 362 (1276)
||||||||| +||++|+|+||||+|+|.+.+| +|+||++|||.+ +.|++||||++|+||.+. .+.+|.
T Consensus 346 GGNI~~Asp~~p~sD~~p~LlAl~A~v~l~s~~g-~R~vpl~dFf~~---~~l~~~Eil~~I~iP~~~~~~~~~~~~~f~ 421 (1344)
T PLN00192 346 GGNLVMAQRKQFPSDIATILLAAGSTVNIQNASK-REKLTLEEFLER---PPLDSKSLLLSVEIPSWTSSSGSDTKLLFE 421 (1344)
T ss_pred hhhhcccCCCCCchhHHHHHHHhCcEEEEEeCCc-eEEEeHHHHhcc---CccCCcceEEEEEccCCccccccCccccee
Confidence 999999974 6999999999999999999999 999999999984 569999999999999653 346688
Q ss_pred EEEEeccC-cccccccceEEEEEEe-----cCCcceEEEEEEEEEecCCC-cceeHHHHHHHhcCCCCCHHHHHHHHHHh
Q 000805 363 EFKQAHRR-DDDIALVNAGMRVYLE-----EKDEEWVVSDALLVYGGVAP-LSLSAKKTKTFIVGKSWSQELLQNALKIL 435 (1276)
Q Consensus 363 ~~K~~~R~-~~d~a~v~~A~~~~~~-----~~~~~~~i~~~ria~Ggv~~-~p~ra~~~E~~L~Gk~~~~~~l~~a~~~l 435 (1276)
+||+++|+ ++|||+||+|+.++++ +++ +|+++||+||||++ +|+|+.++|++|.||+|+++++++|++++
T Consensus 422 ~yk~~~Rr~~~diA~V~aA~~v~~~~~~~~~~~---~i~~aria~Ggvap~~P~ra~~~E~~L~Gk~~~~~~l~~A~~~l 498 (1344)
T PLN00192 422 TYRAAPRPLGNALPYLNAAFLAEVSQDASSGGI---VVNDCRLAFGAYGTKHAIRARKVEEFLTGKVLSDSVLYEAVRLL 498 (1344)
T ss_pred eeeecccccccchhhheeeEEEEEEecccCCCC---eEeEEEEEEecCCCCceecHHHHHHHhcCCCCCHHHHHHHHHHH
Confidence 89999997 8899999999999986 344 79999999999999 69999999999999999999999999999
Q ss_pred hccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhhcCCC-CCc---cC-CCCccccccccccCCCccccccccccCCC
Q 000805 436 QTDIILKEDAPGGMVDFRKSLTLSFFFKFFLWVSHQMEGKN-SIK---ES-VPSTHLSAMQSFHRPSIIGNQDYEITKHG 510 (1276)
Q Consensus 436 ~~e~~~~~~~~~~s~~YR~~la~~l~~r~l~~~~~~~~~~~-~~~---~~-~~~~~~s~~~~~~~~~~~~~q~~~~~~~~ 510 (1276)
.+++.|.++ ++|++||++|+.+|++|||.++.+++.... ... +. ......|+...++||+++|.|.|++.+++
T Consensus 499 ~~~~~p~~~--~~s~eYRr~la~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~~~ 576 (1344)
T PLN00192 499 KGIVVPEDG--TSHPEYRSSLAVGFLFDFLSPLIESNAKSSNGWLDGGSNTKQNPDQHDDVKKPTLLLSSKQQVEENNEY 576 (1344)
T ss_pred HhcCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhccccccccccccccccccccccccccccCCCCCcceeeeccccc
Confidence 999987664 479999999999999999999998772100 000 00 01123688889999999999999988999
Q ss_pred CcCCCcccccCccccccceeEecccCCCCCCcEEEEEEeCCCCCeEEEEeeCccccCCCCEEEEEecCCCC-CCCCCCC-
Q 000805 511 TSVGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGFVGIFFAEDVQ-GDNRIGP- 588 (1276)
Q Consensus 511 ~~vGk~~~r~d~~~kvtG~a~Y~~Di~~~~gmL~a~~vrSp~a~a~I~sID~s~A~~~pGV~~vvt~~Dip-g~n~~~~- 588 (1276)
++||||++|+|+..|+||+|+|++|++++|||||+++||||++||+|++||+++|+++|||++|+|++|+| +.|.+|.
T Consensus 577 ~~vG~~~~r~d~~~kvtG~a~Y~~Di~~~pgmL~a~~vrSp~ahArI~sID~s~A~~~pGV~aV~t~~Dip~~~~~~g~~ 656 (1344)
T PLN00192 577 HPVGEPIKKVGAALQASGEAVYVDDIPSPKNCLYGAFIYSTKPLARVKGIKFKSNLVPQGVLAVITFKDIPKGGQNIGSK 656 (1344)
T ss_pred CcCCCCCcChhhHhhcccceecccccCCCCCCEEEEEEecCCCceEEEEEEhHHhhcCCCcEEEEchHHcCcccccCCCC
Confidence 99999999999999999999999999955899999999999999999999999999999999999999998 3333443
Q ss_pred -CCCcccccccCeEeecCCeEEEEEECCHHHHHHhcccceeeEee--c-CCCCCHHHHHhcCCCCCCC--cceeecCCcc
Q 000805 589 -VVADEELFASEVVTCVGQVIGVVVAETHEEAKLASRKVQVEYEE--L-PAILSIQEAIDAKSFHPNT--ERCFRKGDVD 662 (1276)
Q Consensus 589 -~~~d~~~~a~~~V~y~GqpVa~VvAet~~~A~~Aa~~V~V~ye~--l-p~v~~~~~A~~~~s~~~~~--~~~~~~Gd~~ 662 (1276)
...|+|+|++++|+|+|||||+|||+|+++|++|+++|+|+||+ + |+++|+++|++++++++.. ......||++
T Consensus 657 ~~~~~~~~la~~~Vr~~Gq~Va~VvA~t~~~A~~Aa~~V~VeYe~~~l~p~v~~i~~Al~~~s~~~~~~~~~~~~~GD~~ 736 (1344)
T PLN00192 657 TIFGPEPLFADEVTRCAGQRIALVVADTQKHADMAANLAVVEYDTENLEPPILTVEDAVKRSSLFEVPPFLYPKPVGDIS 736 (1344)
T ss_pred CCCCCceeccCCEEEEcCCeEEEEEECCHHHHHHHhccCEEEEecCCCCCcccCHHHHhcCCCCcccChhhcccccCCHH
Confidence 24589999999999999999999999999999999999999997 4 9999999999998764311 1234679999
Q ss_pred cccccCCCccEE-EEEEEeCcccccCCCCCeeEEEEecCCCeEEEEeCCCChHHHHHHHHHHhCCCCCcEEEEecccCCC
Q 000805 663 ICFQSGQCDKII-EGEVRVGGQEHFYLEPHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGG 741 (1276)
Q Consensus 663 ~af~~~~a~~vv-e~~~~~~~~~H~~mEp~~~~a~~~~~~g~l~V~~stQ~p~~~r~~vA~~Lglp~~kV~V~~~~vGGg 741 (1276)
++| ++|+++| |++|++++|+|+||||++|+|+|+ ++|+|+||+|||+|+.+|..||++||||.+||||+++++|||
T Consensus 737 ~af--~~a~~vv~e~~~~~~~q~H~~mEp~~~vA~~~-~dg~l~V~~sTQ~p~~~r~~vA~~Lgip~~~VrV~~~~vGGg 813 (1344)
T PLN00192 737 KGM--AEADHKILSAEIKLGSQYYFYMETQTALALPD-EDNCIVVYSSTQCPEYVHSVIARCLGIPEHNVRVITRRVGGG 813 (1344)
T ss_pred HHh--ccCCeEEEEEEEEECCEeeeeccCceEEEEEc-CCCCEEEEECCCCHHHHHHHHHHHhCCChHHEEEEecccccC
Confidence 999 9999976 999999999999999999999998 577899999999999999999999999999999999999999
Q ss_pred CCCCCCcchHHHHHHHHHHHhCCCCEEEEechHHHHhhcCCCCCeEEEEEEEECCCCcEEEEEEEEEecCCCCCCchHHH
Q 000805 742 FGGKETRSAFIAAAAAVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLEIYNNAGNSLDLSLAV 821 (1276)
Q Consensus 742 FGgK~~~~~~~a~~aAlaA~~~grPVkl~~tR~ed~~~~~~R~~~~~~~k~g~~~dG~i~a~~~~~~~d~Ga~~~~~~~v 821 (1276)
||+|.++...+++.||++|+++||||||+|||+|+|+++++|||+.++||+|+|+||+|++++++++.|+|+|.+.+..
T Consensus 814 FGgK~~~~~~~~~~aAlaA~~~gRPVr~~~sR~Edm~~~~~R~~~~~~~k~g~~~dG~I~a~~~~~~~d~Ga~~~~~~~- 892 (1344)
T PLN00192 814 FGGKAVKSMPVATACALAAFKLQRPVRMYLNRKTDMIMAGGRHPMKITYSVGFKSDGKITALHLDILINAGISPDISPI- 892 (1344)
T ss_pred CCccccccchHHHHHHHHHHHhCCCEEEEecHHHHhhhcCCcCceEEEEEEEECCCCCEEEEEEEEEEecccCCCcchH-
Confidence 9999876677889999999999999999999999999999999999999999999999999999999999999877643
Q ss_pred HHHHhhccCCCcccCeEEEEEEEEecCCCCCCcccCCChhhhHhHHHHHHHHHHHHcCCCHHHHHHHhcCCCCCcc-ccC
Q 000805 822 LERAMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITENWIQRVAVEVRKSPEEIREINFQGEGSIL-HYG 900 (1276)
Q Consensus 822 ~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~~a~Rg~G~~q~~fa~E~~md~lA~~lg~DP~e~R~~Nl~~~g~~~-~~g 900 (1276)
+...+.+..++|+|||++++++.|+||++|+|||||||.+|++|++|++||++|++|||||+|||++||+++++.. +++
T Consensus 893 ~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~RG~G~pq~~fa~E~~mD~lA~~lg~DP~e~R~~Nl~~~~~~~~~~~ 972 (1344)
T PLN00192 893 MPRNIIGALKKYDWGALSFDIKVCKTNLSSRSAMRAPGEVQGSYIAEAIIEHVASTLSMDVDSVRKINLHTYESLKLFYG 972 (1344)
T ss_pred HHHHHhhcCCCcCCCceEEEEEEEECCCCCCCcccCCCHHHHHHHHHHHHHHHHHHhCcCHHHHHHhcCCCccccccCCC
Confidence 3445557779999999999999999999999999999999999999999999999999999999999999765432 455
Q ss_pred cc---ccCCCHHHHHHHHHHhCCChhhHHhHhhhhccCCccccceEEEeeeeccccccccCCceeEEEEEecCCeEEEEE
Q 000805 901 QQ---LQHCTLFPLWNELKLSCDFLNARKEVDNFNLNNRWKKRGIAMVPTKFGISFTLKLMNQAGALVHVYTDGTVLVTH 977 (1276)
Q Consensus 901 ~~---~~~~~l~~~l~~~~~~~~~~~r~~~~~~fn~~~~~~~rGia~~~~~~g~~~~~~~~~~~~a~V~l~~DGsV~V~~ 977 (1276)
++ ++++.+++||+++++.++|++|++++++||+.|+|+|||+++++..|++++ +++.+.|+|+.||+|+|.|
T Consensus 973 ~~~g~~~~~~~~~~l~~~~~~~~~~~r~~~~~~~n~~~~~~krGig~~~~~~~~~~-----~~~~a~v~i~~DGsv~v~~ 1047 (1344)
T PLN00192 973 DSAGEPSEYTLPSIWDKLASSSEFKQRTEMVKEFNRSNKWKKRGISRVPIVHEVML-----RPTPGKVSILSDGSIAVEV 1047 (1344)
T ss_pred CcccccCCCcHHHHHHHHHHhcChHHHHHHHHHHhhcCCceEEEEEEEEEEEeccc-----cCCceEEEEeCCceEEEEE
Confidence 54 368899999999999999999999888999999999999999999998754 3568999999999999999
Q ss_pred cCccCCcchHHHHHHHHHHHhCC--------CcccEEEecCCCCCCCCCCCCccchhhhHHHHHHHHHHHHHHHHHHHhh
Q 000805 978 GGVEMGQGLHTKVAQVAASAFNI--------PLSSVFVSETSTDKVPNASPTAASASSDIYGAAVLDACEQIKARMEPIA 1049 (1276)
Q Consensus 978 g~~e~GqG~~T~~~qiaAe~Lgi--------p~~~V~v~~~dT~~~p~~~~t~~Sr~t~~~g~Av~~Ac~~l~~rl~~~~ 1049 (1276)
|++|||||++|+++||||++||| |+|+|+|..+||+.+||+++|+|||+|+++|.||++||++|++||++++
T Consensus 1048 G~~e~GQG~~T~~aQiaA~~LGi~~~~~~~ip~e~I~v~~~dT~~~p~~~~t~gSr~t~~~G~Av~~Ac~~l~~rl~~~a 1127 (1344)
T PLN00192 1048 GGIEIGQGLWTKVKQMAAFGLGMIKCDGGEDLLDKIRVIQSDTLSMIQGGFTAGSTTSESSCEAVRLCCVILVERLKPIK 1127 (1344)
T ss_pred CCCCCCCCHHHHHHHHHHHHhCCccccccCCChhhEEEEecCCCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999995 9999999999999999999999999999999999999999999999998
Q ss_pred hcC----CCCCHHHHHHHhhccCcceeEEEEeecCCccccccCCCCCCcccccEEEEEEEEEeeCCCCcEEEeEEEEEEe
Q 000805 1050 SKH----NFNSFAELASACYVQRIDLSAHGFYITPEIDFDWITGKGNPFRYFTYGAAFAEVEIDTLTGDFHTRMANVILD 1125 (1276)
Q Consensus 1050 ~~~----~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~ga~~~eVEVD~~TG~v~V~r~~~v~D 1125 (1276)
++. +.++|.+++..+|...++|+++++|..+. . .+.||+||++++|||||++||+++|+|+++++|
T Consensus 1128 ~~~~~~~~~~~~~~~~~~a~~~~~~L~a~~~~~~~~-~---------~~~y~~~ga~~~eVEVD~~TG~v~vlr~~~~~D 1197 (1344)
T PLN00192 1128 ERLQEQMGSVTWDMLISQAYMQSVNLSASSYYTPDP-S---------SMEYLNYGAAVSEVEVDLLTGETTILRSDIIYD 1197 (1344)
T ss_pred HHHhccCCCcCHHHHHHHhcCCCCCeEEEEEECCCC-C---------CccccceeEEEEEEEEecCCCcEEEEEEEEEEe
Confidence 764 67899999988877777899999985321 0 135789999999999999999999999999999
Q ss_pred cCcccChhhhhhhhhhHHHHHHHHHhcceEEecCCCCccCCCCccccCCCCCCCCCCCCCCCCccEEEEecCCCCCCCCC
Q 000805 1126 LGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPGCLYTCGPGSYKIPSLNDVPLKFNVSLLKGHPNVKAIH 1205 (1276)
Q Consensus 1126 ~G~~iNP~~~~gQieGg~~qGlG~al~Ee~~~d~~~~~~~~~G~~~t~~~~~Y~iP~~~diP~~~~v~~~~~~~~~~~~~ 1205 (1276)
||++|||++++|||||||+|||||+|+||+.|| ++|+++|++|++||||++.|||.+|+|.++++..+|.+||
T Consensus 1198 ~G~~INP~i~~GQIeGg~vqGiG~al~Ee~~yd-------~~G~llt~~~~dY~iPt~~DiP~~~~v~~~e~~~~~~~p~ 1270 (1344)
T PLN00192 1198 CGQSLNPAVDLGQIEGAFVQGIGFFMLEEYTTN-------SDGLVVTDGTWTYKIPTVDTIPKQFNVEILNSGHHKKRVL 1270 (1344)
T ss_pred cCcccCHHHHHHHHHHHHHHHHhHHhceeEEEC-------CCCCCCCCChhhcCCCcccccCCceEEEEEeCCCCCCCCC
Confidence 999999999999999999999999999999998 6899999999999999999999669999999723688999
Q ss_pred CCCcCCCCCccchhhHHHHHHHHHHHHHHh---cC----CCcccCCCCCCCHHHHHHHhcccccccccC
Q 000805 1206 SSKAVGEPPFFLASSVFFAIKDAISAARAD---AG----HTGWFPLDNPATPERIRMACLDEFTAPFIN 1267 (1276)
Q Consensus 1206 gaKgvGE~~~~~~~~v~~Ai~nAi~~A~~~---~G----~~~~~~~~~P~Tpe~i~~a~~~~~~~~~~~ 1267 (1276)
|+||+||+|++++++|++||+|||++||+| .| ...+|.++.|+|||+|+++|++++++++..
T Consensus 1271 gaKgvGE~~~~~~~~v~~Ai~~Ai~~Ar~~~~~~g~~~~~~~~~~l~~pat~e~i~~~~~~~~~~~~~~ 1339 (1344)
T PLN00192 1271 SSKASGEPPLLLAASVHCATRAAIREARKQLLSWGGIDGSDSTFQLPVPATMPVVKELCGLDVVERYLE 1339 (1344)
T ss_pred ccccCccCcccccHHHHHHHHHHHHHHHhhhcccCCcccCCCceecCCCCChHHHHHhcCChHHHHhhh
Confidence 999999999999999999999999999999 78 777899999999999999999999888654
No 5
>PRK09800 putative hypoxanthine oxidase; Provisional
Probab=100.00 E-value=6.6e-162 Score=1541.98 Aligned_cols=703 Identities=26% Similarity=0.353 Sum_probs=624.5
Q ss_pred CCcCCCcccccCccccccceeEecccCCCCCCcEEEEEEeCCCCCeEEEEeeCccccCCCCEEEEEecCCCCC------C
Q 000805 510 GTSVGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGFVGIFFAEDVQG------D 583 (1276)
Q Consensus 510 ~~~vGk~~~r~d~~~kvtG~a~Y~~Di~~~~gmL~a~~vrSp~a~a~I~sID~s~A~~~pGV~~vvt~~Dipg------~ 583 (1276)
++.|||+++|+|++.||||+++|++|+.+ |||||++++|||++||+|++||+|+|++||||++|+|.+|+|. .
T Consensus 169 ~~~VGk~~~R~d~~~kvtG~a~Y~~D~~~-pgmL~a~vvrSp~ahArI~sID~s~A~a~pGV~~Vvt~~Dvp~~~~~~~~ 247 (956)
T PRK09800 169 LEVIGKHYPKTDAAKMVQAKPCYVEDRVT-ADACVIKMLRSPHAHALITHLDVSKAEALPGVVHVITHLNCPDIYYTPGG 247 (956)
T ss_pred cccCCCCCCCcChHhhCcccccccccCCC-CCCEEEEEeecCCCcEEEeeeEHHHHHhCCCeEEEEcHHHCCcccccccC
Confidence 34589999999999999999999999987 7999999999999999999999999999999999999999983 2
Q ss_pred CCCCCCCCcccccccCeEeecCCeEEEEEECCHHHHHHhcccceeeEeecCCCCCHHHHHhcCCC--CCC----------
Q 000805 584 NRIGPVVADEELFASEVVTCVGQVIGVVVAETHEEAKLASRKVQVEYEELPAILSIQEAIDAKSF--HPN---------- 651 (1276)
Q Consensus 584 n~~~~~~~d~~~~a~~~V~y~GqpVa~VvAet~~~A~~Aa~~V~V~ye~lp~v~~~~~A~~~~s~--~~~---------- 651 (1276)
+.++....+.++|++++|||+||||++|||+|+|+|++|+++|+|+||+||+++|+++|++++++ |++
T Consensus 248 ~~~~~~~~~~~~l~~~~Vry~G~~vaaVvAet~~~A~~A~~~V~Veye~Lp~v~d~~~Al~~~a~~vh~~~~~~~~~~~~ 327 (956)
T PRK09800 248 QSAPEPSPLDRRMFGKKMRHVGDRVAAVVAESEEIALEALKLIDVEYEVLKPVMSIDEAMAEDAPVVHDEPVVYVAGAPD 327 (956)
T ss_pred cCCCCCCCCCccccCCeEEEcCCeEEEEEECCHHHHHHHhcCCceEEEeCCccCCHHHHhcCCCceeccccccccccccc
Confidence 22222222344456999999999999999999999999999999999999999999999988873 321
Q ss_pred --------------------------C-----cceeecCCcccccccCCCccEEEEEEEeCcccccCCCCCeeEEEEecC
Q 000805 652 --------------------------T-----ERCFRKGDVDICFQSGQCDKIIEGEVRVGGQEHFYLEPHSSVVWTMDH 700 (1276)
Q Consensus 652 --------------------------~-----~~~~~~Gd~~~af~~~~a~~vve~~~~~~~~~H~~mEp~~~~a~~~~~ 700 (1276)
. ......||++++| ++|++|||++|++++|+|++|||++|+|+|+
T Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Nv~~~~~~~~Gd~~~af--~~a~~vve~~y~~~~~~H~~mEp~~aiA~~d-- 403 (956)
T PRK09800 328 TLEDDNSHAAQRGEHMIINFPIGSRPRKNIAASIHGHIGDMDKGF--ADADVIIERTYNSTQAQQCPTETHICFTRMD-- 403 (956)
T ss_pred ccccccccccccccccccccccccCCCCceeeeccccCCCHHHHH--hhCCEEEEEEEEeCCcccccCCCceEEEEEe--
Confidence 0 0223679999999 9999999999999999999999999999998
Q ss_pred CCeEEEEeCCCChHHHHHHHHHHhCCCCCcEEEEecccCCCCCCCCCcchHHHHHHHHHHHhCCCCEEEEechHHHHhhc
Q 000805 701 GNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKETRSAFIAAAAAVPSFLLNRPVNLTLDRDIDMMIS 780 (1276)
Q Consensus 701 ~g~l~V~~stQ~p~~~r~~vA~~Lglp~~kV~V~~~~vGGgFGgK~~~~~~~a~~aAlaA~~~grPVkl~~tR~ed~~~~ 780 (1276)
+|+|+||+|||+|+.+|..||++||||++||||+.+++|||||+|.+.. ....||++|+++||||||+|||+|+|.++
T Consensus 404 ~~~l~v~~stQ~p~~~r~~vA~~LGlp~~kVrV~~~~vGGgFG~K~~~~--~e~~aA~aA~~~grPVkl~~tReE~~~~~ 481 (956)
T PRK09800 404 GDRLVIHASTQVPWHLRRQVARLVGMKQHKVHVIKERVGGGFGSKQDIL--LEEVCAWATCVTGRPVLFRYTREEEFIAN 481 (956)
T ss_pred CCeeEEEECCCcHHHHHHHHHHHHCCCHHHeEEEcCCCCccCcCccccc--HHHHHHHHHHHhCCCEEEEeeHHHHhhCc
Confidence 4689999999999999999999999999999999999999999998643 34568999999999999999999999999
Q ss_pred CCCCCeEEEEEEEECCCCcEEEEEEEEEecCCCCCCchHHHHHHHhhccCCCcccCeEEEEEEEEecCCCCCCcccCCCh
Q 000805 781 GQRHSFLGKYKVGFTNEGKVLALDLEIYNNAGNSLDLSLAVLERAMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGG 860 (1276)
Q Consensus 781 ~~R~~~~~~~k~g~~~dG~i~a~~~~~~~d~Ga~~~~~~~v~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~~a~Rg~G~ 860 (1276)
++||++.+++|+|+|+||+|++++++++.|+|+|.+++..+...+..+..++|+|||++++.+.|+||++|+|+|||||.
T Consensus 482 ~~R~~~~~~~k~g~d~dG~I~a~~~~~~~d~Gay~~~~~~v~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~p~ga~RG~G~ 561 (956)
T PRK09800 482 TSRHVAKVTVKLGAKKDGRLTAVKMDFRANTGPYGNHSLTVPCNGPALSLPLYPCDNVDFQVTTYYSNICPNGAYQGYGA 561 (956)
T ss_pred CCCCceEEEEEEEECCCCCEEEEEEEEEEcCCcCCCcchHHHHHHHhhcCcCcccceEEEEEEEEECCCCCCCCcCCCCc
Confidence 99999999999999999999999999999999998877777766666777999999999999999999999999999999
Q ss_pred hhhHhHHHHHHHHHHHHcCCCHHHHHHHhcCCCCCcccc-----------Ccc-ccCCCHHHHHHHHHHhCCChhhHHhH
Q 000805 861 PQGMLITENWIQRVAVEVRKSPEEIREINFQGEGSILHY-----------GQQ-LQHCTLFPLWNELKLSCDFLNARKEV 928 (1276)
Q Consensus 861 ~q~~fa~E~~md~lA~~lg~DP~e~R~~Nl~~~g~~~~~-----------g~~-~~~~~l~~~l~~~~~~~~~~~r~~~~ 928 (1276)
+|+.|++|++||++|++|||||+|||+||++++|+.+++ +.+ +.++.+.+||++++++++|.++++
T Consensus 562 pq~~fa~Es~mDelA~~lg~DPve~R~rN~~~~gd~~~~~~~~~~g~~~~~~~~~~s~~~~~~L~~~~e~~~w~~~~~-- 639 (956)
T PRK09800 562 PKGNFAITMALAELAEQLQIDQLEIIERNRVHEGQELKILGAIGEGKAPTSVPSAASCALEEILRQGREMIQWSSPKP-- 639 (956)
T ss_pred chHHHHHHHHHHHHHHHhCcCHHHHHHHhCCCCCcccccccccccccccccCccccCCCHHHHHHHHHHhcCcchhhh--
Confidence 999999999999999999999999999999998887643 223 557889999999999999987533
Q ss_pred hhhhccCCcc-ccceEEEeeeeccccccccCCceeEEEEEecCCeEEEEEcCccCCcchHHHHHHHHHHHhCCCcccEEE
Q 000805 929 DNFNLNNRWK-KRGIAMVPTKFGISFTLKLMNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFV 1007 (1276)
Q Consensus 929 ~~fn~~~~~~-~rGia~~~~~~g~~~~~~~~~~~~a~V~l~~DGsV~V~~g~~e~GqG~~T~~~qiaAe~Lgip~~~V~v 1007 (1276)
.+++|+ |+|+++.+..+|.+. .+.+.+.|+|++||+|+|++|++|||||++|+++|||||+||||+|+|+|
T Consensus 640 ----~~g~~~~G~Gia~~~~~~g~~~----~~~~~a~v~l~~dGsv~v~~g~~e~GqG~~T~~~QiaAe~LGip~d~V~v 711 (956)
T PRK09800 640 ----QNGDWHIGRGVAIIMQKSGIPD----IDQANCMIKLESDGTFIVHSGGADIGTGLDTVVTKLAAEVLHCPPQDVHV 711 (956)
T ss_pred ----hcCCCeeEEEEEEEEEcccCCC----CCCceEEEEECCCceEEEEECCCCCCccHHHHHHHHHHHHHCCCceeEEE
Confidence 135554 777776654444331 24678999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCCCCCCCCccchhhhHHHHHHHHHHHHHHHHHHHhhhc--------------------CCCCCHHHHHHHhhcc
Q 000805 1008 SETSTDKVPNASPTAASASSDIYGAAVLDACEQIKARMEPIASK--------------------HNFNSFAELASACYVQ 1067 (1276)
Q Consensus 1008 ~~~dT~~~p~~~~t~~Sr~t~~~g~Av~~Ac~~l~~rl~~~~~~--------------------~~~~~~~~~~~~a~~~ 1067 (1276)
..+||+.+|++++|+|||+|+++|+||++||++||+||...+++ ...++|.+++..++..
T Consensus 712 ~~~DT~~~p~~~gt~aSr~t~~~G~Av~~Aa~~l~~kl~~~aa~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 791 (956)
T PRK09800 712 ISGDTDHALFDKGAYASSGTCFSGNAARLAAENLREKILFHGAQMLGEPVADVQLATPGVVRGKKGEVSFGDIAHKGETG 791 (956)
T ss_pred EeCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHEEEecCCEEeCCCCcccHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999866432 1136799998776543
Q ss_pred --CcceeEEEEeecCCccccccCCCCCCcccccEEEEEEEEEeeCCCCcEEEeEEEEEEecCcccChhhhhhhhhhHHHH
Q 000805 1068 --RIDLSAHGFYITPEIDFDWITGKGNPFRYFTYGAAFAEVEIDTLTGDFHTRMANVILDLGYSLNPAIDVGQIEGAFIQ 1145 (1276)
Q Consensus 1068 --~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~ga~~~eVEVD~~TG~v~V~r~~~v~D~G~~iNP~~~~gQieGg~~q 1145 (1276)
..++.+.++|..|. .+|+|+|+++|||||++||+++|+|+++++|||++|||.+++||||||++|
T Consensus 792 ~~~~~l~~~~~~~~~~-------------~~~~~~a~~aeVeVD~~TG~vkvl~~~~~~D~G~vINP~~v~gQieGgi~q 858 (956)
T PRK09800 792 TGFGSLVGTGSYITPD-------------FAFPYGANFAEVAVNTRTGEIRLDKFYALLDCGTPVNPELALGQIYGATLR 858 (956)
T ss_pred CCCCCeEEEEEecCCC-------------CCcceEEEEEEEEEECCCCcEEEEEEEEEEECCccCCHHHHHHHHHHHHHH
Confidence 33577777775332 257899999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcceEEecCCCCccCCCCccccCCCCCCCCCCCCCCCCccEEEEecCCCCCCCCCCCCcCCCCCccchhhHHHHH
Q 000805 1146 GLGWLALEELKWGDAAHKWIPPGCLYTCGPGSYKIPSLNDVPLKFNVSLLKGHPNVKAIHSSKAVGEPPFFLASSVFFAI 1225 (1276)
Q Consensus 1146 GlG~al~Ee~~~d~~~~~~~~~G~~~t~~~~~Y~iP~~~diP~~~~v~~~~~~~~~~~~~gaKgvGE~~~~~~~~v~~Ai 1225 (1276)
|||++|+|++.|| ++|+++|.+|++|++|++.|+|.+|++.++|+ ++|.+|||+||+||+++++ +++||
T Consensus 859 GiG~AL~Ee~~~d-------~~G~~~~~~l~~Y~iPt~~DiP~~i~v~~ve~-~~~~~p~GaKgvGE~~~~~---~a~AI 927 (956)
T PRK09800 859 AIGHSMSEEIIYD-------AEGHPLTRDLRSYGAPKIGDIPRDFRAVLVPS-DDKVGPFGAKSISEIGVNG---AAPAI 927 (956)
T ss_pred HHHHHHhCCcEEC-------CCCcCCCCCcccCCCCChhhCCCceEEEEEcC-CCCCCCCCCcccCCCcccc---hHHHH
Confidence 9999999999998 68999999999999999999995599999997 9999999999999999976 46788
Q ss_pred HHHHHHHHHhcCCCcccCCCCCCCHHHHHHHhcc
Q 000805 1226 KDAISAARADAGHTGWFPLDNPATPERIRMACLD 1259 (1276)
Q Consensus 1226 ~nAi~~A~~~~G~~~~~~~~~P~Tpe~i~~a~~~ 1259 (1276)
.|||++|+ |++ ++++|+|||+|++++++
T Consensus 928 anAI~~A~---G~r---~~~lP~tpe~vl~al~~ 955 (956)
T PRK09800 928 ATAIHDAC---GIW---LREWHFTPEKILTALEK 955 (956)
T ss_pred HHHHHHHh---CcC---cccCCCCHHHHHHHHhh
Confidence 88888886 875 68999999999999863
No 6
>TIGR03313 Se_sel_red_Mo probable selenate reductase, molybdenum-binding subunit. Our comparative genomics suggests this protein family to be a subunit of a selenium-dependent molybdenum hydroxylase, although the substrate is not specified. This protein is suggested by Bebien, et al., to be the molybdenum-binding subunit of a molydbopterin-containing selenate reductase. Xi, et al, however, show that mutation of this gene in E. coli conferred sensitivity to adenine, suggesting a defect in purine interconversion. This finding, plus homology of nearby genes in a 23-gene purine catabolism region in E. coli to xanthine dehydrogase subunits suggests xanthine dehydrogenase activity.
Probab=100.00 E-value=2.4e-160 Score=1529.83 Aligned_cols=702 Identities=26% Similarity=0.366 Sum_probs=620.3
Q ss_pred CCcCCCcccccCccccccceeEecccCCCCCCcEEEEEEeCCCCCeEEEEeeCccccCCCCEEEEEecCCCCC------C
Q 000805 510 GTSVGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGFVGIFFAEDVQG------D 583 (1276)
Q Consensus 510 ~~~vGk~~~r~d~~~kvtG~a~Y~~Di~~~~gmL~a~~vrSp~a~a~I~sID~s~A~~~pGV~~vvt~~Dipg------~ 583 (1276)
+++|||+++|+|++.||||+++|++|+.+ |||||++++|||++||+|++||+++|++||||++|+|.+|+|. .
T Consensus 165 ~~~iGk~~~R~d~~~kvtG~a~Y~~D~~~-pgmL~a~v~rSP~ahArI~sID~s~A~a~pGV~~Vvt~~D~p~~~~~~~~ 243 (951)
T TIGR03313 165 LTIIGKNCPKIDAAKMVQAKPCYVEDRVP-ADACVIKMLRSPHPHAWITHLDVSKAEALPGVVHVITHLNCPDIYYTPGG 243 (951)
T ss_pred cccCCCCCcCcChHhhCccCccccccCCC-CCCEEEEEEecCCCcEEEEeeEHHHHHhCCCeEEEEeHHHCCccccCCCC
Confidence 34589999999999999999999999987 8999999999999999999999999999999999999999983 1
Q ss_pred CCCCCCCCcccccccCeEeecCCeEEEEEECCHHHHHHhcccceeeEeecCCCCCHHHHHhcCCC--CCCC---------
Q 000805 584 NRIGPVVADEELFASEVVTCVGQVIGVVVAETHEEAKLASRKVQVEYEELPAILSIQEAIDAKSF--HPNT--------- 652 (1276)
Q Consensus 584 n~~~~~~~d~~~~a~~~V~y~GqpVa~VvAet~~~A~~Aa~~V~V~ye~lp~v~~~~~A~~~~s~--~~~~--------- 652 (1276)
+.++....++++|++++|||+||||++|||+|+|+|++|+++|+|+||+||+++|+++|++++++ |+..
T Consensus 244 ~~~~~~~~~~~~l~~~~Vry~G~~vaaVvAet~~~A~~A~~~I~Veye~Lp~v~d~~~Al~~~ap~ih~~~~~~~~~~~~ 323 (951)
T TIGR03313 244 QSAPEPSPLDRRMFGQKMRHVGDRVAAVVAESEEIALHALKLIEVEYDVLTPVMSIDEAMAAEAPIVHDEPIVYGAGAPD 323 (951)
T ss_pred ccCCCCCCCcccccCCeEEEcCCEEEEEEECCHHHHHHHhcCCeeEEEeCCccCCHHHHhcCCCCeeccccccccccccc
Confidence 22221122344568999999999999999999999999999999999999999999999988873 3210
Q ss_pred --------------------------------cceeecCCcccccccCCCccEEEEEEEeCcccccCCCCCeeEEEEecC
Q 000805 653 --------------------------------ERCFRKGDVDICFQSGQCDKIIEGEVRVGGQEHFYLEPHSSVVWTMDH 700 (1276)
Q Consensus 653 --------------------------------~~~~~~Gd~~~af~~~~a~~vve~~~~~~~~~H~~mEp~~~~a~~~~~ 700 (1276)
......||++++| ++|+++||++|++++|+|++|||++|+|+|+
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Nv~~~~~~~~Gd~~~af--~~A~~vve~~y~~~~~~H~~mEp~~aiA~~d-- 399 (951)
T TIGR03313 324 DLEEQNANADPRGEHMIINFPIGSRPRKNIAASVHGHIGDLNKGF--AEADVIIERTYESTQAQQCPTETHICFTYMD-- 399 (951)
T ss_pred cccccccccccccccccccccccccCCCceeeeccccCCCHHHHH--hcCCEEEEEEEEECCEeeecCCCceEEEEEc--
Confidence 1124679999999 9999999999999999999999999999997
Q ss_pred CCeEEEEeCCCChHHHHHHHHHHhCCCCCcEEEEecccCCCCCCCCCcchHHHHHHHHHHHhCCCCEEEEechHHHHhhc
Q 000805 701 GNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKETRSAFIAAAAAVPSFLLNRPVNLTLDRDIDMMIS 780 (1276)
Q Consensus 701 ~g~l~V~~stQ~p~~~r~~vA~~Lglp~~kV~V~~~~vGGgFGgK~~~~~~~a~~aAlaA~~~grPVkl~~tR~ed~~~~ 780 (1276)
+|+|+||+|||+|+.+|..||++||||.+||||+.+++|||||+|.+.. ....||++|+++||||||+|||+|+|+++
T Consensus 400 ~~~l~V~~stQ~p~~~r~~vA~~Lglp~~kVrV~~~~vGGgFG~K~~~~--~e~~aA~aA~~~GrPVkl~~tReE~~~~~ 477 (951)
T TIGR03313 400 GERLVIHASTQVPWHVRRQVARIVGMKQHKVHVIKERVGGGFGSKQDIL--LEEVCAWATWVTGRPVYFRYTREEEFICN 477 (951)
T ss_pred CCeEEEEECCcCHHHHHHHHHHHHCCCHHHeEEEcCCCCcCcCCccccc--HHHHHHHHHHHhCCCEEEEeeHHHHhhcc
Confidence 4689999999999999999999999999999999999999999998643 34568999999999999999999999999
Q ss_pred CCCCCeEEEEEEEECCCCcEEEEEEEEEecCCCCCCchHHHHHHHhhccCCCcccCeEEEEEEEEecCCCCCCcccCCCh
Q 000805 781 GQRHSFLGKYKVGFTNEGKVLALDLEIYNNAGNSLDLSLAVLERAMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGG 860 (1276)
Q Consensus 781 ~~R~~~~~~~k~g~~~dG~i~a~~~~~~~d~Ga~~~~~~~v~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~~a~Rg~G~ 860 (1276)
++||++.+++|+|+|+||+|+|++++++.|+|+|.+++..+.........++|+|||++++.+.|+||++|.|+|||||.
T Consensus 478 ~~R~~~~~~~k~g~d~dG~I~A~~~~~~~d~Gay~~~~~~v~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~p~ga~Rg~G~ 557 (951)
T TIGR03313 478 TSRHVAKVTVKLGAKKDGKLTAIDMDFRANTGPYGNHSLTVPSNGPALSLPLYPCDNVDFRVTTYYSNICPTGAYQGYGA 557 (951)
T ss_pred CCCCCeEEEEEEEECCCCcEEEEEEEEEEcCccCcccchHHhhhhhhhcCcCccCCeEEEEEEEEECCCCCCCCcCCCCc
Confidence 99999999999999999999999999999999998776666544445567899999999999999999999999999999
Q ss_pred hhhHhHHHHHHHHHHHHcCCCHHHHHHHhcCCCCCccc-----------cCcc-ccCCCHHHHHHHHHHhCCChhhHHhH
Q 000805 861 PQGMLITENWIQRVAVEVRKSPEEIREINFQGEGSILH-----------YGQQ-LQHCTLFPLWNELKLSCDFLNARKEV 928 (1276)
Q Consensus 861 ~q~~fa~E~~md~lA~~lg~DP~e~R~~Nl~~~g~~~~-----------~g~~-~~~~~l~~~l~~~~~~~~~~~r~~~~ 928 (1276)
+|+.|++|++||++|++|||||+|||+||++++|+.++ ++.+ ++++.+.+||++++++++|+++++
T Consensus 558 ~q~~fa~Es~mDelA~~lG~DP~e~R~rN~~~~gd~~~~~~~~~~g~~~~~~~~~~s~~~~~~l~~~~~~~~w~~~~~-- 635 (951)
T TIGR03313 558 PKGNFALTMAMAELAEELGIDQLEMIETNRVHEGQELKILGAIGEGKMPTSVPKAASCALEEILRQGRELIEWDSPKQ-- 635 (951)
T ss_pred ccHHHHHHHHHHHHHHHhCcCHHHHHHHhCCCCCcccccccccccccccccccccCCCcHHHHHHHHHHhcCccchhh--
Confidence 99999999999999999999999999999999998763 2223 457789999999999999987542
Q ss_pred hhhhccCCcc-ccceEEEeeeeccccccccCCceeEEEEEecCCeEEEEEcCccCCcchHHHHHHHHHHHhCCCcccEEE
Q 000805 929 DNFNLNNRWK-KRGIAMVPTKFGISFTLKLMNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFV 1007 (1276)
Q Consensus 929 ~~fn~~~~~~-~rGia~~~~~~g~~~~~~~~~~~~a~V~l~~DGsV~V~~g~~e~GqG~~T~~~qiaAe~Lgip~~~V~v 1007 (1276)
.+++|+ |+|+++....+|.+. .+.+++.|+|++||+|+|++|++|||||+.|+++||+|++||+|+|+|+|
T Consensus 636 ----~~g~~~~G~Gia~~~~~~g~~~----~~~~~a~v~l~~dG~v~v~~g~~e~GqG~~T~~~QiaAe~LGvp~d~V~v 707 (951)
T TIGR03313 636 ----AKGDWKIGRGVAIIMQKSGIPD----IDQANCMIKLESDGTFIVHSGGADIGTGLDTVVSKLTAEVLHCPMDDVHV 707 (951)
T ss_pred ----hccCceeeeEEEEEEecccCCC----CCCccEEEEEcCCceEEEEECCCCCCccHHHHHHHHHHHHHCCCHHhEEE
Confidence 235664 777766554444331 34678999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCCCCCCCCccchhhhHHHHHHHHHHHHHHHHHHHhhhc--------------------CCCCCHHHHHHHhhcc
Q 000805 1008 SETSTDKVPNASPTAASASSDIYGAAVLDACEQIKARMEPIASK--------------------HNFNSFAELASACYVQ 1067 (1276)
Q Consensus 1008 ~~~dT~~~p~~~~t~~Sr~t~~~g~Av~~Ac~~l~~rl~~~~~~--------------------~~~~~~~~~~~~a~~~ 1067 (1276)
..+||+.+|++++|+|||+|+++|+||++||++||+||...++. ...++|++++..++..
T Consensus 708 ~~~DT~~~p~~~gt~aSr~t~~~G~Av~~Aa~~l~~kl~~~aa~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 787 (951)
T TIGR03313 708 ISGDTDHALFDKGAYASSGTCFSGNAAKRAAENLREKILFHGAEMLGEPVADVDLAAPGLVRGKTGEVSYFDIAHKAETG 787 (951)
T ss_pred EeCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHEEEecCCEEeCCCCcccHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999866432 1126799998766532
Q ss_pred --CcceeEEEEeecCCccccccCCCCCCcccccEEEEEEEEEeeCCCCcEEEeEEEEEEecCcccChhhhhhhhhhHHHH
Q 000805 1068 --RIDLSAHGFYITPEIDFDWITGKGNPFRYFTYGAAFAEVEIDTLTGDFHTRMANVILDLGYSLNPAIDVGQIEGAFIQ 1145 (1276)
Q Consensus 1068 --~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~ga~~~eVEVD~~TG~v~V~r~~~v~D~G~~iNP~~~~gQieGg~~q 1145 (1276)
..++...+.|..+. .+|+|+|+++|||||++||+++|+|+++++|||++|||.+++||||||++|
T Consensus 788 ~~~~~~~~~~~~~~~~-------------~~~~~~a~~aeVeVD~~TG~vkv~r~~~~~D~G~~INP~~v~gQieGg~~q 854 (951)
T TIGR03313 788 TGFGQLVGTGSYITSE-------------FAFPYGANFAEVAVNTRTGEIRLDKFYALLDCGTPVNPELALGQIYGATMR 854 (951)
T ss_pred CCCCCeEEEEEecCCC-------------CCccceeEEEEEEEECCCCcEEEEEEEEEEECCcccCHHHHHHHHHHHHHH
Confidence 23466666664321 257899999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcceEEecCCCCccCCCCccccCCCCCCCCCCCCCCCCccEEEEecCCCCCCCCCCCCcCCCCCccchhhHHHHH
Q 000805 1146 GLGWLALEELKWGDAAHKWIPPGCLYTCGPGSYKIPSLNDVPLKFNVSLLKGHPNVKAIHSSKAVGEPPFFLASSVFFAI 1225 (1276)
Q Consensus 1146 GlG~al~Ee~~~d~~~~~~~~~G~~~t~~~~~Y~iP~~~diP~~~~v~~~~~~~~~~~~~gaKgvGE~~~~~~~~v~~Ai 1225 (1276)
|||++|+|++.|| ++|+++|.+|++|++|++.|+|.+|++.++++ ++|.+|||+||+||+++++ +++||
T Consensus 855 GiG~AL~Ee~~~d-------~~G~~~~~~l~~Y~iPt~~D~P~~~~v~~ve~-~~~~~p~GaKGiGE~~~~~---~apAI 923 (951)
T TIGR03313 855 AIGHSMTEEIVYD-------DNGIPLTRDLKSYGAPKIGDIPRDFRAVLVPS-DDKVGPYGAKSISEIGVNG---AAPAI 923 (951)
T ss_pred HHHHHHhCCcEEC-------CCCcCCCCChhhCCCCChHhCCCceEEEEEcC-CCCCCCCCCcccCCCcccc---hHHHH
Confidence 9999999999998 68999999999999999999994499999997 8999999999999999976 46788
Q ss_pred HHHHHHHHHhcCCCcccCCCCCCCHHHHHHHhc
Q 000805 1226 KDAISAARADAGHTGWFPLDNPATPERIRMACL 1258 (1276)
Q Consensus 1226 ~nAi~~A~~~~G~~~~~~~~~P~Tpe~i~~a~~ 1258 (1276)
.|||++|+ |++ ++++|+|||+||++++
T Consensus 924 anAI~dA~---G~r---~~~lP~tPe~vl~al~ 950 (951)
T TIGR03313 924 ATAIHDAC---GVW---LRDWHFTPEKILKGLN 950 (951)
T ss_pred HHHHHHHh---Ccc---cccCCCCHHHHHHHhh
Confidence 88888886 875 6899999999999875
No 7
>COG4631 XdhB Xanthine dehydrogenase, molybdopterin-binding subunit B [Nucleotide transport and metabolism]
Probab=100.00 E-value=1.6e-161 Score=1348.73 Aligned_cols=735 Identities=47% Similarity=0.728 Sum_probs=705.7
Q ss_pred CcCCCcccccCccccccceeEecccCCCCCCcEEEEEEeCCCCCeEEEEeeCccccCCCCEEEEEecCCCCCCCCCCCCC
Q 000805 511 TSVGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGFVGIFFAEDVQGDNRIGPVV 590 (1276)
Q Consensus 511 ~~vGk~~~r~d~~~kvtG~a~Y~~Di~~~~gmL~a~~vrSp~a~a~I~sID~s~A~~~pGV~~vvt~~Dipg~n~~~~~~ 590 (1276)
..||.+.++-++..+|+|+|.|+|||+.|+|.||+++-.|+++||+|+++|.+++++.|||+.|+|++|+||.|..++..
T Consensus 17 ~~v~~~~~HeSAhkHV~GtA~YiDD~pepag~LH~~~gls~~aHAri~~mDl~~v~a~PGVv~vlta~DvPGenDisp~~ 96 (781)
T COG4631 17 GGVGTSLRHESAHKHVTGTAVYIDDIPEPAGTLHGALGLSERAHARITRMDLSAVRAAPGVVDVLTAADVPGENDISPVK 96 (781)
T ss_pred CcccccccccchhhcccceeEEecCCCCcccchhhhccccccchheeeecchHHhhcCCCeEEEEEecCCCCCCCCCccc
Confidence 45899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccccCeEeecCCeEEEEEECCHHHHHHhcccceeeEeecCCCCCHHHHHhcCCCCCCCcceeecCCcccccccCCC
Q 000805 591 ADEELFASEVVTCVGQVIGVVVAETHEEAKLASRKVQVEYEELPAILSIQEAIDAKSFHPNTERCFRKGDVDICFQSGQC 670 (1276)
Q Consensus 591 ~d~~~~a~~~V~y~GqpVa~VvAet~~~A~~Aa~~V~V~ye~lp~v~~~~~A~~~~s~~~~~~~~~~~Gd~~~af~~~~a 670 (1276)
+|+|+|++++|.|+||||-+|+|+|.++|++|+++.+||||+||+++|+.+|+..+.+.. ....+++||.+.+| +.|
T Consensus 97 hddpl~a~gkVef~GQ~vfaV~A~s~e~ARraA~~a~ieYe~lp~~~di~~a~a~~~~v~-~p~~l~rGD~~a~~--~~A 173 (781)
T COG4631 97 HDDPLLADGKVEFHGQPVFAVIAESREAARRAARLAKIEYEDLPPVTDIDEAIAAGRLVT-PPLTLKRGDAAAAL--AAA 173 (781)
T ss_pred CCCccccCceEEEccceEEEEeehhHHHHHHHHHhhhcccccCCccCCHHHHhhcccccC-Cchhhcccchhhhh--hhC
Confidence 999999999999999999999999999999999999999999999999999999886544 45678999999999 999
Q ss_pred ccEEEEEEEeCcccccCCCCCeeEEEEecCCCeEEEEeCCCChHHHHHHHHHHhCCCCCcEEEEecccCCCCCCCCCcch
Q 000805 671 DKIIEGEVRVGGQEHFYLEPHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKETRSA 750 (1276)
Q Consensus 671 ~~vve~~~~~~~~~H~~mEp~~~~a~~~~~~g~l~V~~stQ~p~~~r~~vA~~Lglp~~kV~V~~~~vGGgFGgK~~~~~ 750 (1276)
.+.+++++++++|+|||+|.|.++|.|. |||.++||+|||.|..+|..+|++||+|.|.|.|.++|+|||||||++...
T Consensus 174 p~r~~G~~~iGGQehFYLEgqia~a~p~-Ed~~v~v~~STQhPtE~Q~~vahvLGvpsn~VtV~~rRMGGGFGGKEtQ~~ 252 (781)
T COG4631 174 PHRLQGEMRIGGQEHFYLEGQIALAVPG-EDGDVTVWSSTQHPTEVQHLVAHVLGVPSNAVTVEVRRMGGGFGGKETQAN 252 (781)
T ss_pred chhheeeEEEcCeeeEEEeeeeeEeccC-CCCCEEEEecCCCcHHHHHHHHHHhCCCcceEEEEEEeecCCcCcccccch
Confidence 9999999999999999999999999998 789999999999999999999999999999999999999999999999989
Q ss_pred HHHHHHHHHHHhCCCCEEEEechHHHHhhcCCCCCeEEEEEEEECCCCcEEEEEEEEEecCCCCCCchHHHHHHHhhccC
Q 000805 751 FIAAAAAVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLEIYNNAGNSLDLSLAVLERAMFHSD 830 (1276)
Q Consensus 751 ~~a~~aAlaA~~~grPVkl~~tR~ed~~~~~~R~~~~~~~k~g~~~dG~i~a~~~~~~~d~Ga~~~~~~~v~~~~~~~~~ 830 (1276)
.+++.||++|+|++||||+..+|.|||+++||||+|...|++|||+||+|++++..+..++|++.|+|.++.++++.|++
T Consensus 253 ~fAa~aA~aA~k~~r~vk~RpdRdeDm~~TGKRHdF~v~y~vGfDdeGri~~v~~~~aarcGfS~DLSgpV~dRAlfH~D 332 (781)
T COG4631 253 QFAALAALAAKKTGRPVKIRPDRDEDMTATGKRHDFHVDYEVGFDDEGRILGVDATLAARCGFSADLSGPVTDRALFHAD 332 (781)
T ss_pred HHHHHHHHHHHHhCCceeecCCcchhhhhccCcCceEEEeeeccCCCCcEEEeeeehhhccCcccccCccchhhheeccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccCeEEEEEEEEecCCCCCCcccCCChhhhHhHHHHHHHHHHHHcCCCHHHHHHHhcCCCCC--ccccCccccCCCH
Q 000805 831 NVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITENWIQRVAVEVRKSPEEIREINFQGEGS--ILHYGQQLQHCTL 908 (1276)
Q Consensus 831 ~~Y~ipn~~~~~~~v~TN~~~~~a~Rg~G~~q~~fa~E~~md~lA~~lg~DP~e~R~~Nl~~~g~--~~~~g~~~~~~~l 908 (1276)
+.|.+|++++.++.++||+.++++|||||.||+++++|.+||++|..||+||+|+|++|++.++. .|||+|..++..+
T Consensus 333 NaYf~p~v~~~s~~~kTntvSnTAfRGFGGPQGm~~~Eriid~vA~alGkdpleiRk~NfYg~~~~n~TpYhQ~Vednii 412 (781)
T COG4631 333 NAYFYPHVHILSRPLKTNTVSNTAFRGFGGPQGMLGIERIIDEVAYALGKDPLEIRKLNFYGKDGRNVTPYHQTVEDNII 412 (781)
T ss_pred cceeccceeeecceeeccccccccccccCCcchhhHHHHHHHHHHHHhCCCHHHHHhhhccCCCCCccCccccchHHhHH
Confidence 99999999999999999999999999999999999999999999999999999999999998765 7899999999999
Q ss_pred HHHHHHHHHhCCChhhHHhHhhhhccCCccccceEEEeeeeccccccccCCceeEEEEEecCCeEEEEEcCccCCcchHH
Q 000805 909 FPLWNELKLSCDFLNARKEVDNFNLNNRWKKRGIAMVPTKFGISFTLKLMNQAGALVHVYTDGTVLVTHGGVEMGQGLHT 988 (1276)
Q Consensus 909 ~~~l~~~~~~~~~~~r~~~~~~fn~~~~~~~rGia~~~~~~g~~~~~~~~~~~~a~V~l~~DGsV~V~~g~~e~GqG~~T 988 (1276)
.++|+++..+++|..|++++.+||+..+..||||++.|.+||++|+..+.||++|+|+||.||||.++||++|||||++|
T Consensus 413 ~ri~~ELeaSsdyaaRr~~i~aFNa~spv~krGlAlTPVKFGISFt~t~~NQAGALVHvY~DGSi~lNHGGTEMGQGL~t 492 (781)
T COG4631 413 ARIVDELEASSDYAARREAIRAFNAASPVIKRGLALTPVKFGISFTATHYNQAGALVHVYTDGSIHLNHGGTEMGQGLYT 492 (781)
T ss_pred HHHHHHHHhcchHHHHHHHHHHhhccChhhhccccccceeeeEEEeeeeeccCceEEEEeccCeEEEcCCCcccccchhH
Confidence 99999999999999999999999999999999999999999999998889999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCcccEEEecCCCCCCCCCCCCccchhhhHHHHHHHHHHHHHHHHHHHhhhc-----------------
Q 000805 989 KVAQVAASAFNIPLSSVFVSETSTDKVPNASPTAASASSDIYGAAVLDACEQIKARMEPIASK----------------- 1051 (1276)
Q Consensus 989 ~~~qiaAe~Lgip~~~V~v~~~dT~~~p~~~~t~~Sr~t~~~g~Av~~Ac~~l~~rl~~~~~~----------------- 1051 (1276)
|++||+|++|+|++++|+|..++|+++||++.|.+|+|++++|+|+++||++||+||-.|++.
T Consensus 493 KvaQVvA~~fqvd~~rVkitaT~T~KVpNTSaTAASSGsDLNGmAa~dAa~qIk~RLv~fAA~~~~V~~~~v~F~~n~vr 572 (781)
T COG4631 493 KVAQVVAEEFQVDIDRVKITATTTDKVPNTSATAASSGSDLNGMAAQDAARQIKERLVAFAAEHWGVPEEDVAFLPNRVR 572 (781)
T ss_pred HHHHHHHHHhCcccceEEEeccccCCCCCCccccccccCCcccHHHHHHHHHHHHHHHHHHHHhcCCCHHHeEecCCeeE
Confidence 999999999999999999999999999999999999999999999999999999999999854
Q ss_pred --CCCCCHHHHHHHhhccCcceeEEEEeecCCccccccCCCCCCcccccEEEEEEEEEeeCCCCcEEEeEEEEEEecCcc
Q 000805 1052 --HNFNSFAELASACYVQRIDLSAHGFYITPEIDFDWITGKGNPFRYFTYGAAFAEVEIDTLTGDFHTRMANVILDLGYS 1129 (1276)
Q Consensus 1052 --~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~ga~~~eVEVD~~TG~v~V~r~~~v~D~G~~ 1129 (1276)
+..++|+++++++|..++.|++.|||++|++.||...+.|.||+||+|||.|+||+||++||+.+++|.++.||+|++
T Consensus 573 ig~~~~~F~~lv~~AY~arvqLsaaGFY~TPkihwdra~~~G~PFyYFaYGAacSEV~vDtlTGey~~~R~DiLHDvG~S 652 (781)
T COG4631 573 IGGQELAFADLVKQAYFARVQLSAAGFYKTPKIHWDRAAGRGRPFYYFAYGAACSEVSVDTLTGEYKVERTDILHDVGRS 652 (781)
T ss_pred EcceecCHHHHHHHHhheeeeeeccccccCCccccchhhcCCCceEEEeecceeeeEEEecccceEEEEeehhhhhhhhh
Confidence 124799999999999999999999999999998888999999999999999999999999999999999999999999
Q ss_pred cChhhhhhhhhhHHHHHHHHHhcceEEecCCCCccCCCCccccCCCCCCCCCCCCCCCCccEEEEecCCCC-CCCCCCCC
Q 000805 1130 LNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPGCLYTCGPGSYKIPSLNDVPLKFNVSLLKGHPN-VKAIHSSK 1208 (1276)
Q Consensus 1130 iNP~~~~gQieGg~~qGlG~al~Ee~~~d~~~~~~~~~G~~~t~~~~~Y~iP~~~diP~~~~v~~~~~~~~-~~~~~gaK 1208 (1276)
|||+++.|||||||+||+||.++||+.|| +.|+|.|..+++||||.++|.|.+|+|.+.+.+.+ ...+++||
T Consensus 653 LNpaiDlGQiEGgFvQGmGWLTtEeL~wd-------~kGRlrThapSTYKiP~~sdrP~~f~V~L~~~~~n~e~ti~rSK 725 (781)
T COG4631 653 LNPAIDLGQIEGGFVQGMGWLTTEELWWD-------EKGRLRTHAPSTYKIPLASDRPKIFNVRLAEWSENAEPTIHRSK 725 (781)
T ss_pred cccccccccccchhcccccccchhhheec-------cCCCeeecCCccccCcccccCchheeeehhcccccccccccccc
Confidence 99999999999999999999999999999 79999999999999999999999999999997333 34789999
Q ss_pred cCCCCCccchhhHHHHHHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHhcc
Q 000805 1209 AVGEPPFFLASSVFFAIKDAISAARADAGHTGWFPLDNPATPERIRMACLD 1259 (1276)
Q Consensus 1209 gvGE~~~~~~~~v~~Ai~nAi~~A~~~~G~~~~~~~~~P~Tpe~i~~a~~~ 1259 (1276)
.|||||++++.||..||++|+.+- .|.++ ...++.|+|||+|++++.+
T Consensus 726 AVGEPPlmL~iSV~~Al~~AvAsv-aD~r~--~p~ldaPATpErVlmave~ 773 (781)
T COG4631 726 AVGEPPLMLGISVLEALSDAVASV-ADYRV--CPRLDAPATPERVLMAVER 773 (781)
T ss_pred ccCCCCcchhHHHHHHHHHHHHHh-cccCc--CCCCCCCCCHHHHHHHHHH
Confidence 999999999999999999999765 34333 3468999999999999864
No 8
>TIGR03311 Se_dep_Molyb_1 selenium-dependent molybdenum hydroxylase 1. Members of this protein family show full length homology to the molybdenum-containing aldehyde oxido-reductase of Desulfovibrio gigas. Members, however, are found only within species that have, and near those genes that encode, a set of predicted accessory proteins for selenium-dependent molybdenum hydroxylases. The best known examples of such enzymes are forms of xanthine dehydrogenase and purine hydroxylase; this family appears to be another such enzyme.
Probab=100.00 E-value=6.7e-155 Score=1472.86 Aligned_cols=672 Identities=27% Similarity=0.388 Sum_probs=591.0
Q ss_pred CCCcccccCccccccceeEecccCCCCCCcEEEEEEeCCCCCeEEEEeeCccccCCCCEEEEEecCCCCCCCCCCCCCCc
Q 000805 513 VGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGFVGIFFAEDVQGDNRIGPVVAD 592 (1276)
Q Consensus 513 vGk~~~r~d~~~kvtG~a~Y~~Di~~~~gmL~a~~vrSp~a~a~I~sID~s~A~~~pGV~~vvt~~Dipg~n~~~~~~~d 592 (1276)
|||+++|+|+..||||+++|++|+.+ |||||++++|||++||+|++||+|+|++||||++|+|++|+|+.+.++....+
T Consensus 162 iG~~~~R~d~~~kvtG~~~Y~~Di~~-pgmL~a~~vrSp~ahA~I~~ID~s~A~a~PGV~aVvt~~Dip~~~~~g~~~~~ 240 (848)
T TIGR03311 162 LGENFPRVDAVPKVLGEGVYVDDMQI-EGMLYGSALRSKYPRALVKSIDITVALKHPGVVAVLTAKDIPGNRKIGHIFKD 240 (848)
T ss_pred CCCccCCcChhhhCcccccccccCCC-CCCEEEEEEeCCCCCEEEEeeEHHHHHhCCCcEEEEeHHHCCCccCCCCCCCC
Confidence 89999999999999999999999998 89999999999999999999999999999999999999999975555554455
Q ss_pred cc-ccc-cCeEeecCCeEEEEEECCHHHHHHhcccceeeEeecCCCCCHHHHHhcCC--CCCC----CcceeecCCcccc
Q 000805 593 EE-LFA-SEVVTCVGQVIGVVVAETHEEAKLASRKVQVEYEELPAILSIQEAIDAKS--FHPN----TERCFRKGDVDIC 664 (1276)
Q Consensus 593 ~~-~~a-~~~V~y~GqpVa~VvAet~~~A~~Aa~~V~V~ye~lp~v~~~~~A~~~~s--~~~~----~~~~~~~Gd~~~a 664 (1276)
+| +|+ +++|||+|||||+|+|+|+++|++|+++|+|+||++|+++|+++|+++++ +|+. ....+.+||++++
T Consensus 241 ~~~~~a~~~~Vry~Ge~VA~VvA~t~~~A~~A~~~V~Veye~lp~v~d~~~A~~~~a~~i~~~~Nv~~~~~~~~Gdv~~a 320 (848)
T TIGR03311 241 WPALIAVGEITRYVGDAVALVAAKSKEALREALNLIKVDYEELPPLTSPEEALAEGAPAIHPKGNILSEEHVVRGDAEEA 320 (848)
T ss_pred ccccccCCCEEEEcCCeEEEEEECCHHHHHHHhCCCcEEEecCCCcCCHHHHhcCCCCeECCCCCCcceeeecCCCHHHH
Confidence 55 344 58999999999999999999999999999999999999999999998876 3431 1234678999999
Q ss_pred cccCCCccEEEEEEEeCcccccCCCCCeeEEEEecCCCeEEEEeCCCChHHHHHHHHHHhCCCCCcEEEEecccCCCCCC
Q 000805 665 FQSGQCDKIIEGEVRVGGQEHFYLEPHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGG 744 (1276)
Q Consensus 665 f~~~~a~~vve~~~~~~~~~H~~mEp~~~~a~~~~~~g~l~V~~stQ~p~~~r~~vA~~Lglp~~kV~V~~~~vGGgFGg 744 (1276)
| ++|++|||++|++++|+|+||||++|+|+|+ +|+|+||+|||+|+.+|..||++||||++||||+.+++|||||+
T Consensus 321 f--~~A~~vve~~y~~~~~~h~~mEp~~~vA~~~--~~~l~v~~stQ~p~~~r~~vA~~Lglp~~~VrV~~~~vGGgFG~ 396 (848)
T TIGR03311 321 L--ENSAYVVTNHYSTPFTEHAFLEPESALAVPE--GDGVIIYTSTQGVYDEQRELASLLGLPKEKIRVINKFVGGGFGG 396 (848)
T ss_pred h--hcCCeEEEEEEEECCEeeeecCCceEEEEEe--CCeEEEEECCcCHHHHHHHHHHHhCCChHHEEEEeCCCCCcCCc
Confidence 9 9999999999999999999999999999997 56799999999999999999999999999999999999999999
Q ss_pred CCCcchHHHHHHHHHHHhCCCCEEEEechHHHHhhcCCCCCeEEEEEEEECCCCcEEEEEEEEEecCCCCCCchHHHHHH
Q 000805 745 KETRSAFIAAAAAVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLEIYNNAGNSLDLSLAVLER 824 (1276)
Q Consensus 745 K~~~~~~~a~~aAlaA~~~grPVkl~~tR~ed~~~~~~R~~~~~~~k~g~~~dG~i~a~~~~~~~d~Ga~~~~~~~v~~~ 824 (1276)
|.... .+..||++|+++||||||+|||+|+|+.+++||++.+++|+|+|+||+|++++++++.|+|+|.+++..++.+
T Consensus 397 K~~~~--~~~~aA~~A~~~gRPVkl~~sR~E~~~~~~~R~~~~~~~k~g~d~dG~i~a~~~~~~~d~Gay~~~~~~v~~~ 474 (848)
T TIGR03311 397 KEDMS--VQHHAALLAWATKRPVKVTLTRKESILVHPKRHAMEMTFTTGCDEAGNLTAMKADIIADTGAYASLGGPVLQR 474 (848)
T ss_pred ccccc--HHHHHHHHHHHhCCCEEEEechHHhhhccCCCCceEEEEEEEECCCCcEEEEEEEEEEccccCCCccHHHHHH
Confidence 99753 4568999999999999999999999999999999999999999999999999999999999999887778888
Q ss_pred HhhccCCCcccCeEEEEEEEEecCCCCCCcccCCChhhhHhHHHHHHHHHHHHcCCCHHHHHHHhcCCCCCccccCcccc
Q 000805 825 AMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITENWIQRVAVEVRKSPEEIREINFQGEGSILHYGQQLQ 904 (1276)
Q Consensus 825 ~~~~~~~~Y~ipn~~~~~~~v~TN~~~~~a~Rg~G~~q~~fa~E~~md~lA~~lg~DP~e~R~~Nl~~~g~~~~~g~~~~ 904 (1276)
++.++.++|+|||++++++.|+||++|.++|||||.+|++|++|++||++|++|||||+|||++|++++|+.+++|+.++
T Consensus 475 ~~~~~~~~Y~ipn~~~~~~~v~TN~~p~ga~RG~G~pq~~fa~E~~mD~lA~~lg~DP~E~R~rN~~~~gd~~~~g~~~~ 554 (848)
T TIGR03311 475 ACTHAAGPYKYPNVDIRGTAVYTNNPPAGAFRGFGVTQSNFAMECNLNLLAEKVGLSPWEIRFKNAVEPGDTLPNGQVVS 554 (848)
T ss_pred HHHhcCCCccCceEEEEEEEEECCCCCCCCccCCChhHHHHHHHHHHHHHHHHhCcCHHHHHHHhCCCCCCcCCCCceeC
Confidence 88889999999999999999999999999999999999999999999999999999999999999999999999999997
Q ss_pred -CCCHHHHHHHHHHhCCChhhHHhHhhhhccCCccccceEEEeeeeccccccccCCceeEEEEEecCCeEEEEEcCccCC
Q 000805 905 -HCTLFPLWNELKLSCDFLNARKEVDNFNLNNRWKKRGIAMVPTKFGISFTLKLMNQAGALVHVYTDGTVLVTHGGVEMG 983 (1276)
Q Consensus 905 -~~~l~~~l~~~~~~~~~~~r~~~~~~fn~~~~~~~rGia~~~~~~g~~~~~~~~~~~~a~V~l~~DGsV~V~~g~~e~G 983 (1276)
+..+++||+++++. |.+ ++++|+++.....|+++. ..+.+.+.+.++ ||+|+|.+|++|||
T Consensus 555 ~~~~~~~~l~~~~~~--~~~-------------~~~~G~~~~~~~~g~~~~--~~~~~~~~~~~~-DGsv~v~~g~~e~G 616 (848)
T TIGR03311 555 EGTAIKETLLAVKEV--YEK-------------SPCAGIACAFKNSGVGVG--IPDTGRCNLAVE-DGKVHIRTSAACIG 616 (848)
T ss_pred CCchHHHHHHHHHHH--hhh-------------ccCCeEEEEEEEeccccC--CCCcceEEEEEc-CCEEEEEECCCCcC
Confidence 55699999999874 431 235688776655555432 123456777777 99999999999999
Q ss_pred cchHHHHHHHHHHHhCCCcccEEEecCCCCCCCCCCCCccchhhhHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHH
Q 000805 984 QGLHTKVAQVAASAFNIPLSSVFVSETSTDKVPNASPTAASASSDIYGAAVLDACEQIKARMEPIASKHNFNSFAELASA 1063 (1276)
Q Consensus 984 qG~~T~~~qiaAe~Lgip~~~V~v~~~dT~~~p~~~~t~~Sr~t~~~g~Av~~Ac~~l~~rl~~~~~~~~~~~~~~~~~~ 1063 (1276)
||++|+++||+||.||||+|+|+|..+||+.+|++++|+|||+|.++|+||++||++||+||+.. .|.++...
T Consensus 617 QG~~T~~aQiaAe~LGip~e~V~v~~~DT~~~p~~~gt~aSR~t~~~G~Av~~Aa~~l~~~l~~~-------~~~~l~~~ 689 (848)
T TIGR03311 617 QGLGTVLTQIVCETTGLPPEVIVCELPDTALTPDSGTTTASRQSLFTGEATRRAAAKLKEALRGR-------TLAELEGE 689 (848)
T ss_pred cCHHHHHHHHHHHHHCCCHHHEEEEcCCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhc-------CHHHcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999742 34444111
Q ss_pred hhccC-----cceeEEEEeecCCccccccCCCCCCcccccEEEEEEEEEeeCCCCcEEEeEEEEEEecCcccChhhhhhh
Q 000805 1064 CYVQR-----IDLSAHGFYITPEIDFDWITGKGNPFRYFTYGAAFAEVEIDTLTGDFHTRMANVILDLGYSLNPAIDVGQ 1138 (1276)
Q Consensus 1064 a~~~~-----~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~ga~~~eVEVD~~TG~v~V~r~~~v~D~G~~iNP~~~~gQ 1138 (1276)
.+... .++...+.+ ..++..|+|+++++| || +|| +|+|+++++|||++|||.+++||
T Consensus 690 ~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~e--Vd-~tG--~v~r~~~v~D~G~vINP~~veGQ 751 (848)
T TIGR03311 690 EFYGEYHSITDPLNSDKEN-------------PVSHVGYGYATQVVI--LD-DAG--KVEKVVAAYDVGRAINPLNLEGQ 751 (848)
T ss_pred EEeeccccccCcceeeccC-------------CCCccccceEEEEEE--EC-CCC--eEEEEEEEEeCCccCCHHHHHHH
Confidence 10000 001111100 011223445555555 56 899 67899999999999999999999
Q ss_pred hhhHHHHHHHHHhcceEEecCCCCccCCCCccccCCCCCCCCCCCCCCCCccEEEEecCCCCCCCCCCCCcCCCCCccch
Q 000805 1139 IEGAFIQGLGWLALEELKWGDAAHKWIPPGCLYTCGPGSYKIPSLNDVPLKFNVSLLKGHPNVKAIHSSKAVGEPPFFLA 1218 (1276)
Q Consensus 1139 ieGg~~qGlG~al~Ee~~~d~~~~~~~~~G~~~t~~~~~Y~iP~~~diP~~~~v~~~~~~~~~~~~~gaKgvGE~~~~~~ 1218 (1276)
||||++||||++|+|++.|| +|++++ +|++|++|++.|+|+ |++.++|+ ++|.+|||+||+||+++++
T Consensus 752 ieGG~~qGlG~AL~Ee~~~d--------~G~~~~-~~~dY~iPt~~D~P~-i~v~~ve~-~~~~~p~GaKGvGE~~~~~- 819 (848)
T TIGR03311 752 IEGGIVMGLGYALTEDFPLR--------EGIPTA-KFGTLGLFRSTQVPE-IETHLIEK-NGTPLAYGAKGVGELATIP- 819 (848)
T ss_pred HHHHHHHHHHHHhcCcEEec--------CCeecC-ChhhccCCChhhCCC-eEEEEEeC-CCCCCCCCCccCCCCcccc-
Confidence 99999999999999999997 599886 599999999999995 99999997 9999999999999999975
Q ss_pred hhHHHHHHHHHHHHHHhcCCCcccCCCCCCCHHHHH
Q 000805 1219 SSVFFAIKDAISAARADAGHTGWFPLDNPATPERIR 1254 (1276)
Q Consensus 1219 ~~v~~Ai~nAi~~A~~~~G~~~~~~~~~P~Tpe~i~ 1254 (1276)
+++||+|||++|+ |++ ++++|+|||+|+
T Consensus 820 --~~~AIanAV~~A~---G~r---~~~lP~~p~~v~ 847 (848)
T TIGR03311 820 --TAPAVAGAYYRFD---GKF---RLSLPLENTPYT 847 (848)
T ss_pred --hHHHHHHHHHHhH---CcC---cccCCCCccccc
Confidence 5789999999987 886 799999999986
No 9
>TIGR02965 xanthine_xdhB xanthine dehydrogenase, molybdopterin binding subunit. Members of the protein family are the molybdopterin-containing large subunit (or, in, eukaryotes, the molybdopterin-binding domain) of xanthine dehydrogenase, and enzyme that reduces the purine pool by catabolizing xanthine to urate. This model is based primarily on bacterial sequences; it does not manage to include all eukaryotic xanthine dehydrogenases and thereby discriminate them from the closely related enzyme aldehyde dehydrogenase.
Probab=100.00 E-value=3.7e-154 Score=1459.88 Aligned_cols=734 Identities=47% Similarity=0.751 Sum_probs=673.8
Q ss_pred CCCcccccCccccccceeEecccCCCCCCcEEEEEEeCCCCCeEEEEeeCccccCCCCEEEEEecCCCCCCCCCCCCCCc
Q 000805 513 VGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGFVGIFFAEDVQGDNRIGPVVAD 592 (1276)
Q Consensus 513 vGk~~~r~d~~~kvtG~a~Y~~Di~~~~gmL~a~~vrSp~a~a~I~sID~s~A~~~pGV~~vvt~~Dipg~n~~~~~~~d 592 (1276)
|||+++|+|+..|+||+++|++|+..+|||||+++||||++||+|++||+|+|+++|||++|+|++|+|+.|.++....+
T Consensus 1 ~G~~~~R~d~~~kvtG~a~Y~~Di~~~pgmL~a~~vrSp~aha~I~~iD~s~A~~~pGV~~V~t~~D~p~~~~~g~~~~~ 80 (758)
T TIGR02965 1 VGTSLKHESAHKHVAGTAVYIDDIPEPAGTLHAALGLSTRAHARITSMDLSAVRAAPGVVDVLTAADIPGENDISPIIHD 80 (758)
T ss_pred CCCCccCcchHhhCceeeEcccCCCCCCCCEEEEEEecCCCceEEeecchHHHhcCCCcEEEEEHHHCCCCCCCCCCCCC
Confidence 69999999999999999999999963489999999999999999999999999999999999999999977666666678
Q ss_pred ccccccCeEeecCCeEEEEEECCHHHHHHhcccceeeEeecCCCCCHHHHHhcCCCCCCCcceeecCCcccccccCCCcc
Q 000805 593 EELFASEVVTCVGQVIGVVVAETHEEAKLASRKVQVEYEELPAILSIQEAIDAKSFHPNTERCFRKGDVDICFQSGQCDK 672 (1276)
Q Consensus 593 ~~~~a~~~V~y~GqpVa~VvAet~~~A~~Aa~~V~V~ye~lp~v~~~~~A~~~~s~~~~~~~~~~~Gd~~~af~~~~a~~ 672 (1276)
+|+|++++|||+|||||+|||+|+++|++|+++|+|+||+||+++|+++|+++++...+....+..||++++| ++|++
T Consensus 81 ~~~la~~~Vry~Ge~va~VvA~~~~~A~~A~~~i~V~ye~lp~v~d~~~Al~~~a~~~~~~~~~~~Gd~~~af--~~a~~ 158 (758)
T TIGR02965 81 DPLLADGKVEFVGQPIFAVIATSRDAARRAARLAKIEYEELPAVLDIEEALAAGSRFVTPPLTLERGDAEAAL--AAAPH 158 (758)
T ss_pred ceeccCCEEEEcCCeEEEEEECCHHHHHHHhhccEEEEEcCCccCCHHHHhcCCCCcccCcccccCCCHHHHH--hhCCE
Confidence 9999999999999999999999999999999999999999999999999999886321123345889999999 99999
Q ss_pred EEEEEEEeCcccccCCCCCeeEEEEecCCCeEEEEeCCCChHHHHHHHHHHhCCCCCcEEEEecccCCCCCCCCCcchHH
Q 000805 673 IIEGEVRVGGQEHFYLEPHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKETRSAFI 752 (1276)
Q Consensus 673 vve~~~~~~~~~H~~mEp~~~~a~~~~~~g~l~V~~stQ~p~~~r~~vA~~Lglp~~kV~V~~~~vGGgFGgK~~~~~~~ 752 (1276)
+||++|++++|+|++|||++|+|+|+ ++|+|+||+|||+|+.+|..||++||||++||||+++++|||||+|.+...++
T Consensus 159 vve~~y~~~~~~h~~mEp~~~vA~~~-~~g~l~v~~stQ~p~~~r~~lA~~Lglp~~~VrV~~~~vGGgFG~K~~~~~~~ 237 (758)
T TIGR02965 159 RLSGEMRIGGQEHFYLEGQIALAVPG-EDGGMHVWSSTQHPSEVQHLVAHVLGVPSHAVTVEVRRMGGGFGGKETQANLF 237 (758)
T ss_pred EEEEEEEECCEeEEecCCceEEEEEc-CCCCEEEEECCCChHHHHHHHHHHhCCChHHEEEEeCCCccCccccccccchH
Confidence 99999999999999999999999998 46789999999999999999999999999999999999999999999764455
Q ss_pred HHHHHHHHHhCCCCEEEEechHHHHhhcCCCCCeEEEEEEEECCCCcEEEEEEEEEecCCCCCCchHHHHHHHhhccCCC
Q 000805 753 AAAAAVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLEIYNNAGNSLDLSLAVLERAMFHSDNV 832 (1276)
Q Consensus 753 a~~aAlaA~~~grPVkl~~tR~ed~~~~~~R~~~~~~~k~g~~~dG~i~a~~~~~~~d~Ga~~~~~~~v~~~~~~~~~~~ 832 (1276)
++.||++|+++||||||+|||+|+|+++++||++.+++|+|+|+||+|++++++++.|+|+|.+.+..++.+....+.++
T Consensus 238 ~~~aa~~A~~~grPVk~~~sR~E~~~~~~~r~~~~~~~~~g~~~dG~i~a~~~~~~~d~Gay~~~~~~~~~~~~~~~~~~ 317 (758)
T TIGR02965 238 ACLAAVAARKTGRPVKLRPDRDDDMMITGKRHDFLVDYDVGFDDEGRILGVDIDMAARCGFSADLSGPVTDRALFHADNA 317 (758)
T ss_pred HHHHHHHHHHHCCCEEEEechHHhhhhccCccceEEEEEEEECCCCCEEEEEEEEeecCcccCCcchHHHHHHHHhcCCc
Confidence 78999999999999999999999999999999999999999999999999999999999999876666777777788999
Q ss_pred cccCeEEEEEEEEecCCCCCCcccCCChhhhHhHHHHHHHHHHHHcCCCHHHHHHHhcCCCCCcc--ccCccccCCCHHH
Q 000805 833 YEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITENWIQRVAVEVRKSPEEIREINFQGEGSIL--HYGQQLQHCTLFP 910 (1276)
Q Consensus 833 Y~ipn~~~~~~~v~TN~~~~~a~Rg~G~~q~~fa~E~~md~lA~~lg~DP~e~R~~Nl~~~g~~~--~~g~~~~~~~l~~ 910 (1276)
|+|||++++++.|+||++|+++|||||.+|+.|++|++||++|++|||||+|||++|++++|+.+ ++|+.+++..+++
T Consensus 318 Y~ipn~~~~~~~v~TN~~~~ga~Rg~G~~q~~fa~E~~mD~~A~~lg~DP~e~R~~Nl~~~g~~~~~~~g~~~~s~~~~~ 397 (758)
T TIGR02965 318 YFLPDVTITSHPLKTNTQSNTAFRGFGGPQGMVAIERIMDEVARALGKDPLEVRKRNFYGKDERNVTPYHQTVEDNIIHE 397 (758)
T ss_pred ccCCceEEEEEEEEcCCCCCccccCCChHHHHHHHHHHHHHHHHHhCcCHHHHHHHcCCCCCCCCcCCCceeccCCcHHH
Confidence 99999999999999999999999999999999999999999999999999999999999888766 6799999999999
Q ss_pred HHHHHHHhCCChhhHHhHhhhhccCCccccceEEEeeeeccccccccCCceeEEEEEecCCeEEEEEcCccCCcchHHHH
Q 000805 911 LWNELKLSCDFLNARKEVDNFNLNNRWKKRGIAMVPTKFGISFTLKLMNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKV 990 (1276)
Q Consensus 911 ~l~~~~~~~~~~~r~~~~~~fn~~~~~~~rGia~~~~~~g~~~~~~~~~~~~a~V~l~~DGsV~V~~g~~e~GqG~~T~~ 990 (1276)
||+++++.++|++|+++.++||..++|++||+++++..||.++.....+++++.|+|++||+|+|.+|.+|||||++|++
T Consensus 398 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~rGiG~a~~~~g~~~~~~~~~~~~a~v~i~~dG~v~v~~g~~e~GQG~~T~l 477 (758)
T TIGR02965 398 IIEELEESSDYAARRAAIRAFNAASPVLKKGIALTPVKFGISFTVTHLNQAGALVHVYTDGSIHLNHGGTEMGQGLNTKV 477 (758)
T ss_pred HHHHHHHhCCHHHHHHHHHHHHhcCCCceeEEEEeeeeccccccccccCccceEEEEeCCCcEEEEECCCCCCCCHHHHH
Confidence 99999999999998887777888888889999999988887664322356789999999999999999999999999999
Q ss_pred HHHHHHHhCCCcccEEEecCCCCCCCCCCCCccchhhhHHHHHHHHHHHHHHHHHHHhhhc-------------------
Q 000805 991 AQVAASAFNIPLSSVFVSETSTDKVPNASPTAASASSDIYGAAVLDACEQIKARMEPIASK------------------- 1051 (1276)
Q Consensus 991 ~qiaAe~Lgip~~~V~v~~~dT~~~p~~~~t~~Sr~t~~~g~Av~~Ac~~l~~rl~~~~~~------------------- 1051 (1276)
+||+||+||||+|+|+|..+||+.+|++++|+|||+|.+.|.||++||++||++|++++++
T Consensus 478 aQIaAe~LGi~~d~V~v~~~DT~~~p~~~gT~gSr~t~~~g~Av~~Aa~~lr~~l~~~Aa~~l~~~~~~l~~~~g~v~~~ 557 (758)
T TIGR02965 478 AQVVAEEFQVDIDRVKITATDTDKVPNTSATAASSGSDLNGMAAQDAARQIKERLVAFAAEKWQVPAEDVRFAPNHVRVG 557 (758)
T ss_pred HHHHHHHhCCCHHHEEEEecCccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHEEEECCEEEeC
Confidence 9999999999999999999999999999999999999999999999999999999888643
Q ss_pred CCCCCHHHHHHHhhccCcceeEEEEeecCCccccccCCCCCCcccccEEEEEEEEEeeCCCCcEEEeEEEEEEecCcccC
Q 000805 1052 HNFNSFAELASACYVQRIDLSAHGFYITPEIDFDWITGKGNPFRYFTYGAAFAEVEIDTLTGDFHTRMANVILDLGYSLN 1131 (1276)
Q Consensus 1052 ~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~ga~~~eVEVD~~TG~v~V~r~~~v~D~G~~iN 1131 (1276)
...++|.+++..++....+|.+.++|..+...++...+.+.++.+|+||+|++|||||++||+++|+|+++++|||++||
T Consensus 558 ~~~~~~~~l~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ga~~~eVeVD~~TG~v~v~~~~~~~D~G~~iN 637 (758)
T TIGR02965 558 EQRVPFAELVQQAYFARVQLSSTGFYKTPKIHWDRAKGRGRPFYYFAYGAACSEVSVDTLTGEYKVLRADILHDVGRSLN 637 (758)
T ss_pred CCccCHHHHHHHHhhcCCCcEEEEEEcCCCccccccccCCCCcceeeeeEEEEEEEEecCCCcEEEEEEEEEEecCCcCC
Confidence 12478999998887666679999998766544444444455555789999999999999999999999999999999999
Q ss_pred hhhhhhhhhhHHHHHHHHHhcceEEecCCCCccCCCCccccCCCCCCCCCCCCCCCCccEEEEecC-CCCCCCCCCCCcC
Q 000805 1132 PAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPGCLYTCGPGSYKIPSLNDVPLKFNVSLLKG-HPNVKAIHSSKAV 1210 (1276)
Q Consensus 1132 P~~~~gQieGg~~qGlG~al~Ee~~~d~~~~~~~~~G~~~t~~~~~Y~iP~~~diP~~~~v~~~~~-~~~~~~~~gaKgv 1210 (1276)
|.+++|||+||++||||++|+|++.|| ++|+++|.||++|++|++.|+|++|++.++|+ .+++.+|||+||+
T Consensus 638 P~~~~GQi~Gg~~qGiG~aL~E~~~~d-------~~G~~l~~~~~dY~iPta~DiP~~~~~~~~e~~~~~~~~p~GaKGv 710 (758)
T TIGR02965 638 PAIDIGQVEGGFVQGMGWLTTEELVWD-------EKGRLRTHAPSTYKIPAASDRPKDFNVRLFEWSENREDTIHRSKAV 710 (758)
T ss_pred HHHhhhhhhhhhhhhhhHhhccceEEC-------CCcCCcCCCCcCcCCCChhhCCCccEEEEecCCCCCCCCCcCCccc
Confidence 999999999999999999999999998 68999999999999999999995499999994 2456899999999
Q ss_pred CCCCccchhhHHHHHHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHhcc
Q 000805 1211 GEPPFFLASSVFFAIKDAISAARADAGHTGWFPLDNPATPERIRMACLD 1259 (1276)
Q Consensus 1211 GE~~~~~~~~v~~Ai~nAi~~A~~~~G~~~~~~~~~P~Tpe~i~~a~~~ 1259 (1276)
||++++++++|++||+|||++|+ |++.|+.+++|+|||+||++|++
T Consensus 711 GE~~~~~~aav~~AI~nAi~~a~---g~~~~~~~~lP~tpe~v~~al~~ 756 (758)
T TIGR02965 711 GEPPLMLGISVLFAISDAVASVA---DYRVCPRLDAPATPERVLMAVEA 756 (758)
T ss_pred CccchhhHHHHHHHHHHHHHHhh---ccCCCCCCCCCCCHHHHHHHHHh
Confidence 99999887889999999999997 88766779999999999999864
No 10
>TIGR03194 4hydrxCoA_A 4-hydroxybenzoyl-CoA reductase, alpha subunit. This model represents the largest chain, alpha, of the enzyme 4-hydroxybenzoyl-CoA reductase. In species capable of degrading various aromatic compounds by way of benzoyl-CoA, this enzyme can convert 4-hydroxybenzoyl-CoA to benzoyl-CoA.
Probab=100.00 E-value=9.1e-147 Score=1388.30 Aligned_cols=709 Identities=25% Similarity=0.331 Sum_probs=636.2
Q ss_pred ccccCccccccceeEecccCCCCCCcEEEEEEeCCCCCeEEEEeeCccccCCCCEEEEEecCCCCCCCCCCCCCCccccc
Q 000805 517 EVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGFVGIFFAEDVQGDNRIGPVVADEELF 596 (1276)
Q Consensus 517 ~~r~d~~~kvtG~a~Y~~Di~~~~gmL~a~~vrSp~a~a~I~sID~s~A~~~pGV~~vvt~~Dipg~n~~~~~~~d~~~~ 596 (1276)
++|+|+..||||+++|++|+.+ |||||++++|||++||+|++||+++|+++|||++|+|++|+|..........|+|+|
T Consensus 1 ~~R~d~~~kvtG~a~Y~~D~~~-pgmL~a~vvrSp~ahA~I~siD~s~A~a~pGV~~V~t~~D~p~~~g~~~~~~d~~~l 79 (746)
T TIGR03194 1 VPLVDGVEKVTGKAKYTADLAA-PGALVGRILRSPHAHARILAIDTSEAEALPGVIAVVTGADCPVPYGVLPIAENEYPL 79 (746)
T ss_pred CcCcchHhhCccccccccCCCC-CCCEEEEEEecCCccEEEeeccHHHHHhCCCcEEEEeHHHCCcccCCCCCCCCCccC
Confidence 4799999999999999999998 899999999999999999999999999999999999999998521111123589999
Q ss_pred ccCeEeecCCeEEEEEECCHHHHHHhcccceeeEeecCCCCCHHHHHhcCCC--CCCC------cceeecCCcccccccC
Q 000805 597 ASEVVTCVGQVIGVVVAETHEEAKLASRKVQVEYEELPAILSIQEAIDAKSF--HPNT------ERCFRKGDVDICFQSG 668 (1276)
Q Consensus 597 a~~~V~y~GqpVa~VvAet~~~A~~Aa~~V~V~ye~lp~v~~~~~A~~~~s~--~~~~------~~~~~~Gd~~~af~~~ 668 (1276)
++++|||+|||||+|+|+|+++|++|+++|+|+||+||+++|+++|+++++. |++. ...+.+||++++| +
T Consensus 80 a~~~Vr~~G~~VA~VvA~t~~~A~~A~~~v~Veye~lp~v~d~~~Al~~~a~~ih~~~~~Nv~~~~~~~~Gd~~~a~--~ 157 (746)
T TIGR03194 80 ARDKVRYRGDPVAAVAAVDEVTAEKALALIKVEYEELPAYMDPKAAMKAGAILLHDNKPGNIEREVHNEFGDVAAAF--A 157 (746)
T ss_pred CCCeEEEcCCeEEEEEECCHHHHHHHhcCCcEEEecCCCcCCHHHHhcCCCCccCCCCCCcEEEEEeeccCCHhHHh--c
Confidence 9999999999999999999999999999999999999999999999988773 4321 1345789999999 9
Q ss_pred CCccEEEEEEEeCcccccCCCCCeeEEEEecCCCeEEEEeCCCChHHHHHHHHHHhCCCCCcEEEEecccCCCCCCCCCc
Q 000805 669 QCDKIIEGEVRVGGQEHFYLEPHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKETR 748 (1276)
Q Consensus 669 ~a~~vve~~~~~~~~~H~~mEp~~~~a~~~~~~g~l~V~~stQ~p~~~r~~vA~~Lglp~~kV~V~~~~vGGgFGgK~~~ 748 (1276)
+|+++||++|++++|+|+||||++|+|+|++++|+|+||+|||+|+.+|..||++||||.+||||+++++|||||+|...
T Consensus 158 ~a~~vve~~~~~~~~~h~~mEp~~~~A~~~~~~~~l~v~~stQ~p~~~r~~va~~Lglp~~kVrV~~~~vGGgFG~K~~~ 237 (746)
T TIGR03194 158 EADLIREKTFTCAEVNHAHMEPNATLAEYDPVRGMLTLNSVTQVPYYVHLKLARCLQMDSARIRVIKPFLGGGFGARVEP 237 (746)
T ss_pred cCCEEEEEEEEECCEeEEccCCCeEEEEEeCCCCeEEEEECCCchHHHHHHHHHHhCCCHHHeEEEcCCCcCcccccccc
Confidence 99999999999999999999999999999844578999999999999999999999999999999999999999999875
Q ss_pred chHHHHHHHHHHHhCCCCEEEEechHHHHhhcCCCCCeEEEEEEEECCCCcEEEEEEEEEecCCCCCCchHHHHHHHhhc
Q 000805 749 SAFIAAAAAVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLEIYNNAGNSLDLSLAVLERAMFH 828 (1276)
Q Consensus 749 ~~~~a~~aAlaA~~~grPVkl~~tR~ed~~~~~~R~~~~~~~k~g~~~dG~i~a~~~~~~~d~Ga~~~~~~~v~~~~~~~ 828 (1276)
..+++.||++|+++||||||+|||+|+|.++.+||++.+++|+|+|+||+|++++++++.|+|+|.+++..++......
T Consensus 238 -~~~~~~aal~a~~~grPVk~~~~ReE~~~~~~~R~~~~~~~~~g~~~dG~i~a~~~~~~~d~Gay~~~~~~~~~~~~~~ 316 (746)
T TIGR03194 238 -LNFEIIAGLLARKAKGTVRLLQTREETFITHRGRPQTYVKMKIGLKKDGKITACAAEVVQRGGAYAGYGIVTILYAGAL 316 (746)
T ss_pred -chHHHHHHHHHHHhCCCEEEecchhhhhhcCCCCCceEEEEEEEECCCCeEEEEEEEEeecccccCCcchHHHHHHHHh
Confidence 3467899999999999999999999999999999999999999999999999999999999999998887777777778
Q ss_pred cCCCcccCeEEEEEEEEecCCCCCCcccCCChhhhHhHHHHHHHHHHHHcCCCHHHHHHHhcCCCCCccccCccccCCCH
Q 000805 829 SDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITENWIQRVAVEVRKSPEEIREINFQGEGSILHYGQQLQHCTL 908 (1276)
Q Consensus 829 ~~~~Y~ipn~~~~~~~v~TN~~~~~a~Rg~G~~q~~fa~E~~md~lA~~lg~DP~e~R~~Nl~~~g~~~~~g~~~~~~~l 908 (1276)
+.++|+|||++++++.|+||++|+|+|||||.+|+.|++|++||++|++|||||+|||++|+++.|+.+++|+.++++++
T Consensus 317 ~~g~Y~ipn~~~~~~~v~TN~~~~ga~Rg~G~~q~~fa~E~~mD~lA~~lg~DPve~R~~N~~~~~~~~~~g~~~~s~~~ 396 (746)
T TIGR03194 317 LHGLYDIPAVKYDGYRVYTNTPPCGAMRGHGTVDTRAAFESLLDEMAAELGIDPFAIRRRNLLQAPTVTMNDLRVMSYGL 396 (746)
T ss_pred cCCCcccceEEEEEEEEEcCCCCCCCCCCCChhHHHHHHHHHHHHHHHHhCcCHHHHHHHhCcCCCCCCCCCceecCCCH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCChhhHHhHhhhhccCCccccceEEEeeeecccccc----ccCCceeEEEEEecCCeEEEEEcCccCCc
Q 000805 909 FPLWNELKLSCDFLNARKEVDNFNLNNRWKKRGIAMVPTKFGISFTL----KLMNQAGALVHVYTDGTVLVTHGGVEMGQ 984 (1276)
Q Consensus 909 ~~~l~~~~~~~~~~~r~~~~~~fn~~~~~~~rGia~~~~~~g~~~~~----~~~~~~~a~V~l~~DGsV~V~~g~~e~Gq 984 (1276)
++||++++++++|.+|++.. +++||+++++..++.+.+. ...+++++.|++++||+|+|.+|++||||
T Consensus 397 ~~~l~~~~e~~~w~~~~~~~--------~~~rGiG~a~~~~~~~~~~~~~~~~~~~~~a~v~l~~dG~v~v~~g~~e~Gq 468 (746)
T TIGR03194 397 PECLEKVEQASGWEERKGRL--------PKGRGLGIACSHFVSGSAKPIHFTGEPHATVALKLDFDGGITLLTGAADIGQ 468 (746)
T ss_pred HHHHHHHHHhcCchhhhhhc--------cccEEEEEEEEEEeccCCcccccCCCCCceEEEEEcCCccEEEEEcCCCCCC
Confidence 99999999999998765421 2356666666655433211 12346889999999999999999999999
Q ss_pred chHHHHHHHHHHHhCCCcccEEEecCCCCCCCCCCCCccchhhhHHHHHHHHHHHHHHHHHHHhhhc-------------
Q 000805 985 GLHTKVAQVAASAFNIPLSSVFVSETSTDKVPNASPTAASASSDIYGAAVLDACEQIKARMEPIASK------------- 1051 (1276)
Q Consensus 985 G~~T~~~qiaAe~Lgip~~~V~v~~~dT~~~p~~~~t~~Sr~t~~~g~Av~~Ac~~l~~rl~~~~~~------------- 1051 (1276)
|++|+++||+||.||+|+|+|+|..+||+.+|++++|+|||+|++.|.||++||++||+||++++++
T Consensus 469 G~~T~~~qiaAe~LGip~d~V~v~~~DT~~~p~~~gt~~Sr~t~~~G~Av~~Aa~~l~~~l~~~aa~~l~~~~~~l~~~~ 548 (746)
T TIGR03194 469 GSSTIASQVAAEVLGVRLSRIRVISADSALTPKDNGSYSSRVTFMVGNAAIDAAEELKGVLVAAAAKKLDAREEDIECAG 548 (746)
T ss_pred CHHHHHHHHHHHHhCCCHHhEEEEccCCCCCCCCCCChhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHEEEEC
Confidence 9999999999999999999999999999999999999999999999999999999999999888653
Q ss_pred ---------CCCCCHHHHHHHhhccCcceeEEEEeecCCccccccC--CCCC-CcccccEEEEEEEEEeeCCCCcEEEeE
Q 000805 1052 ---------HNFNSFAELASACYVQRIDLSAHGFYITPEIDFDWIT--GKGN-PFRYFTYGAAFAEVEIDTLTGDFHTRM 1119 (1276)
Q Consensus 1052 ---------~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~~--~~g~-~~~~~~~ga~~~eVEVD~~TG~v~V~r 1119 (1276)
...++|.+++..++....+|...++|..+. .+.+.. ..+. ...+|+|+|+++|||||++||+++|+|
T Consensus 549 g~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~a~~aeVeVD~~TG~v~v~~ 627 (746)
T TIGR03194 549 EMFFVSGSADPGLSFQEVVKAALVDSGTITVKGTYTCPP-EFQGGKKRGGAVGSTMGFSYAAQVVEVSVDEETGKVTVHK 627 (746)
T ss_pred CEEEECCCCCCceeHHHHHHHhcccCCCceEEEEecCCC-ccccccccccccCcccccceeEEEEEEEEECCCCCEEEEE
Confidence 123689999876665555788888886332 111110 0000 123679999999999999999999999
Q ss_pred EEEEEecCcccChhhhhhhhhhHHHHHHHHHhcceEEecCCCCccCCCCccccCCCCCCCCCCCCCCCCccEEEEecCCC
Q 000805 1120 ANVILDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPGCLYTCGPGSYKIPSLNDVPLKFNVSLLKGHP 1199 (1276)
Q Consensus 1120 ~~~v~D~G~~iNP~~~~gQieGg~~qGlG~al~Ee~~~d~~~~~~~~~G~~~t~~~~~Y~iP~~~diP~~~~v~~~~~~~ 1199 (1276)
+++++|||++|||++++||||||++||||++|+|++.|| +|+++|.||++|++|++.|+|+ ++|.++|+ +
T Consensus 628 ~~~~~D~G~viNP~~v~gQi~Gg~~~GiG~aL~E~~~~d--------~G~~~~~~l~~Y~ipt~~d~P~-i~v~~ve~-~ 697 (746)
T TIGR03194 628 VWVAVDCGKAINPLAVEGQVQGAVWMGMGQALSEETVYD--------NGRMKHASLLDYRVPTIVESPD-IEVIIVES-M 697 (746)
T ss_pred EEEEEeCCCcCCHHHHHHHHHHHHHHHHHHHhcCceEec--------CCeECCCChhhccCCChhccCC-eEEEEEeC-C
Confidence 999999999999999999999999999999999999998 4999999999999999999995 99999997 8
Q ss_pred CCCCCCCCCcCCCCCccchhhHHHHHHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHh
Q 000805 1200 NVKAIHSSKAVGEPPFFLASSVFFAIKDAISAARADAGHTGWFPLDNPATPERIRMAC 1257 (1276)
Q Consensus 1200 ~~~~~~gaKgvGE~~~~~~~~v~~Ai~nAi~~A~~~~G~~~~~~~~~P~Tpe~i~~a~ 1257 (1276)
++.+|||+||+||+++++ +++||+|||++|+ |++ ++++|+|||+|+++|
T Consensus 698 ~~~~p~Gakg~GE~~~~~---~~~AIanAI~~A~---G~r---~~~lP~tpe~v~~al 746 (746)
T TIGR03194 698 DPNGPFGAKEASEGALAG---FLPAIHNAVYDAV---GVR---ATDLPLTPDRVTEAL 746 (746)
T ss_pred CCCCCCCCCcCCCCcccc---hHHHHHHHHHHhh---CCC---cccCCCCHHHHHhhC
Confidence 999999999999999974 6889999999997 886 689999999999875
No 11
>PRK09970 xanthine dehydrogenase subunit XdhA; Provisional
Probab=100.00 E-value=1.4e-146 Score=1392.79 Aligned_cols=708 Identities=27% Similarity=0.377 Sum_probs=641.2
Q ss_pred cCCCcccccCccccccceeEecccCCCCCCcEEEEEEeCCCCCeEEEEeeCccccCCCCEEEEEecCCCCCCCC--CCC-
Q 000805 512 SVGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGFVGIFFAEDVQGDNR--IGP- 588 (1276)
Q Consensus 512 ~vGk~~~r~d~~~kvtG~a~Y~~Di~~~~gmL~a~~vrSp~a~a~I~sID~s~A~~~pGV~~vvt~~Dipg~n~--~~~- 588 (1276)
+|||+++|+|+..||||+++|++|+.+ |||||++++|||++||+|+|||+++|+++|||++|+|++|+|+.|. .+.
T Consensus 2 ~vG~~~~r~d~~~kvtG~~~Y~~D~~~-~gmL~a~~~rSp~aharI~siD~~~A~~~pGV~~Vvt~~D~p~~~~~~~~~~ 80 (759)
T PRK09970 2 AIGKSIMRVDAIAKVTGRAKYTDDYVM-AGMLYAKYVRSPIAHGKVKSIDTEEARSLPGVEAVFTWEDVPDIPFPTAGHP 80 (759)
T ss_pred CCCCCCcCcchHHhCcCCccccccCCC-CCCEEEEEEcCCCceEEEeeeeHHHHHhCCCcEEEEeHHHcCCccccccccc
Confidence 589999999999999999999999998 8999999999999999999999999999999999999999986542 111
Q ss_pred -------CCCcccccccCeEeecCCeEEEEEECCHHHHHHhcccceeeEeecCCCCCHHHHHhcCC--CCCC-----Ccc
Q 000805 589 -------VVADEELFASEVVTCVGQVIGVVVAETHEEAKLASRKVQVEYEELPAILSIQEAIDAKS--FHPN-----TER 654 (1276)
Q Consensus 589 -------~~~d~~~~a~~~V~y~GqpVa~VvAet~~~A~~Aa~~V~V~ye~lp~v~~~~~A~~~~s--~~~~-----~~~ 654 (1276)
...|+|+|++++|||+|||||+|+|+|+++|++|+++|+|+||+||+++|+++|+++++ +|+. ...
T Consensus 81 ~~~~~~~~~~~~~~la~~~Vr~~G~~VAaVvA~~~~~A~~A~~~i~Veye~lp~v~~~~~Al~~~a~~ih~~~~ni~~~~ 160 (759)
T PRK09970 81 WSLDPNHRDIADRALLTRHVRHHGDAVAAVVARDELTAEKALKLIKVEYEELPVITDPEAALAEGAPPIHNGRGNLLKQS 160 (759)
T ss_pred cCCCCCCCCCCCccCcCCEEEEcCCeEEEEEeCCHHHHHHHhCCCcEeEEeCCccCCHHHHhCCCCCccCCCCCceeeee
Confidence 11378899999999999999999999999999999999999999999999999998776 3531 123
Q ss_pred eeecCCcccccccCCCccEEEEEEEeCcccccCCCCCeeEEEEecCCCeEEEEeCCCChHHHHHHHHHHhCCCCCcEEEE
Q 000805 655 CFRKGDVDICFQSGQCDKIIEGEVRVGGQEHFYLEPHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCK 734 (1276)
Q Consensus 655 ~~~~Gd~~~af~~~~a~~vve~~~~~~~~~H~~mEp~~~~a~~~~~~g~l~V~~stQ~p~~~r~~vA~~Lglp~~kV~V~ 734 (1276)
.+..||++++| ++|++|||++|++++|+|+||||++|+|+|+ ++|+|+||+|||+|+.+|..||++||||++||||+
T Consensus 161 ~~~~Gd~~~a~--~~a~~vve~~y~~~~~~h~~mEp~~~iA~~~-~~g~l~v~~stQ~p~~~~~~ia~~Lglp~~~VrV~ 237 (759)
T PRK09970 161 TMSTGNVQQTI--KAADYQVQGHYETPIVQHCHMENVTSYAYME-DDGRITIVSSTQIPHIVRRVVGQALGIPWGKVRVI 237 (759)
T ss_pred eeccCChhHhh--ccCCEEEEEEEEECCEeEeccCCceEEEEEC-CCCCEEEEECCCcHHHHHHHHHHHhCCCHHHEEEE
Confidence 45789999999 9999999999999999999999999999997 46889999999999999999999999999999999
Q ss_pred ecccCCCCCCCCCcchHHHHHHHHHHHhC-CCCEEEEechHHHHhhcCCCCCeEEEEEEEECCCCcEEEEEEEEEecCCC
Q 000805 735 TKRIGGGFGGKETRSAFIAAAAAVPSFLL-NRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLEIYNNAGN 813 (1276)
Q Consensus 735 ~~~vGGgFGgK~~~~~~~a~~aAlaA~~~-grPVkl~~tR~ed~~~~~~R~~~~~~~k~g~~~dG~i~a~~~~~~~d~Ga 813 (1276)
++++|||||+|.+... ...||++|+++ ||||||+|||+|+|+++.+||++.+++|+|+|+||+|++++++++.|+|+
T Consensus 238 ~~~vGGgFG~K~~~~~--~~~aa~la~~~~grPVk~~~~R~E~~~~~~~r~~~~~~~~~g~~~dG~i~a~~~~~~~d~Ga 315 (759)
T PRK09970 238 KPYVGGGFGNKQDVLE--EPLAAFLTSKVGGRPVKVSLSREECFLATRTRHAFTIDIKMGVNRDGTLKGYSLDVLSNTGA 315 (759)
T ss_pred eCCCCCCcCcccccCH--HHHHHHHHHHhcCCCeEEeechhHhhhcCCCCCceEEEEEEEECCCCcEEEEEEEEeecccc
Confidence 9999999999987543 35677888888 99999999999999999999999999999999999999999999999999
Q ss_pred CCCchHHHHHHHhhccCCCcccCeEEEEEEEEecCCCCCCcccCCChhhhHhHHHHHHHHHHHHcCCCHHHHHHHhcCCC
Q 000805 814 SLDLSLAVLERAMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITENWIQRVAVEVRKSPEEIREINFQGE 893 (1276)
Q Consensus 814 ~~~~~~~v~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~~a~Rg~G~~q~~fa~E~~md~lA~~lg~DP~e~R~~Nl~~~ 893 (1276)
|.+++..++..+...+.++|+|||++++++.|+||++|+|+|||||.+|++|++|++||++|++|||||+|||++|++++
T Consensus 316 y~~~~~~~~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~Rg~G~~q~~fa~E~~mD~~A~~lg~DP~e~R~~N~~~~ 395 (759)
T PRK09970 316 YASHGHSIASAGGNKVAYLYPRCAYKYSSKTVYTNLPSAGAMRGYGAPQVVFAVESMLDDAATALGIDPVEFRLRNAARE 395 (759)
T ss_pred CCCcchHHHHHHHhhcCCCccCceEEEEEEEEECCCCCCCCCCCCChhHHHHHHHHHHHHHHHHhCcCHHHHHHHhCCCC
Confidence 99888778777777889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccc-CccccCCCHHHHHHHHHHhCCChhhHHhHhhhhccCCccccceEEEeeeeccccccccCCceeEEEEEecCCe
Q 000805 894 GSILHY-GQQLQHCTLFPLWNELKLSCDFLNARKEVDNFNLNNRWKKRGIAMVPTKFGISFTLKLMNQAGALVHVYTDGT 972 (1276)
Q Consensus 894 g~~~~~-g~~~~~~~l~~~l~~~~~~~~~~~r~~~~~~fn~~~~~~~rGia~~~~~~g~~~~~~~~~~~~a~V~l~~DGs 972 (1276)
|+.+++ |+.+++..+++||++++++++|++++++.+. .+.|++||+|+++..++.++.....+++++.|+|++||+
T Consensus 396 g~~~~~~g~~~~s~~~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~rGiG~a~~~~~~~~~~~~~~~~~a~v~i~~dGs 472 (759)
T PRK09970 396 GDANPLSGKRIYSAGLPECLEKGRKIFEWDKRRAECKN---QQGNLRRGVGVACFSYTSGTWPVGLEIAGARLLMNQDGT 472 (759)
T ss_pred CCcCCCCCeeecCCCHHHHHHHHHHhcCchhhhHhHhh---hcCCceEEEEEEEEEEeecCCCCCCCcceEEEEEccCce
Confidence 999986 8888999999999999999999987665432 123567888888777776654333467899999999999
Q ss_pred EEEEEcCccCCcchHHHHHHHHHHHhCCCcccEEEecC-CCCCCCCCCCCccchhhhHHHHHHHHHHHHHHHHHHHhhhc
Q 000805 973 VLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSET-STDKVPNASPTAASASSDIYGAAVLDACEQIKARMEPIASK 1051 (1276)
Q Consensus 973 V~V~~g~~e~GqG~~T~~~qiaAe~Lgip~~~V~v~~~-dT~~~p~~~~t~~Sr~t~~~g~Av~~Ac~~l~~rl~~~~~~ 1051 (1276)
|+|.+|.+|||||+.|+++||+||+||+|+++|+|... ||+.+|++++|+|||++.+.|.|+++||++|++||+..++.
T Consensus 473 v~v~~g~~e~GQG~~T~~aQiaAe~LGi~~~~V~v~~~~dT~~~p~~~gt~aSr~t~~~g~Av~~Aa~~lr~~l~~~aa~ 552 (759)
T PRK09970 473 VQVQSGATEIGQGSDTVFSQMVAETVGIPVSDVRVISTQDTDVTPFDPGAYASRQSYVAGPAIRKAALELKEKILAHAAV 552 (759)
T ss_pred EEEEECCCCcCCCHHHHHHHHHHHHhCCCHHhEEEEccCCCCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999988 99999999999999999999999999999999999887542
Q ss_pred C----------------------CCCCHHHHHHHhhccC---cceeEEEEeecCCccccccCCCCCCcccccEEEEEEEE
Q 000805 1052 H----------------------NFNSFAELASACYVQR---IDLSAHGFYITPEIDFDWITGKGNPFRYFTYGAAFAEV 1106 (1276)
Q Consensus 1052 ~----------------------~~~~~~~~~~~a~~~~---~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~ga~~~eV 1106 (1276)
. ..++|.+++..+|... .++...+.|..+. .+|+|+|+++||
T Consensus 553 ~l~~~~~~l~~~~G~v~~~~~~~~~~~~~~la~~a~~~~~~~~~~~~~~~~~~~~-------------~~~~~~a~~aeV 619 (759)
T PRK09970 553 MLHQSAMNLDIIDGHIVVKRPGEPLMSLEELAMDAYYHPERGGQITAESSIKTTT-------------NPPAFGCTFVDV 619 (759)
T ss_pred HhCCChHHEEEECCEEEECCCCCccccHHHHHHHhhccccCCCceeEEEEecCCC-------------CCCceEEEEEEE
Confidence 0 1378999988776532 3466666654321 257899999999
Q ss_pred EeeCCCCcEEEeEEEEEEecCcccChhhhhhhhhhHHHHHHHHHhcceEEecCCCCccCC-CCccccCCCCCCCCCCCCC
Q 000805 1107 EIDTLTGDFHTRMANVILDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIP-PGCLYTCGPGSYKIPSLND 1185 (1276)
Q Consensus 1107 EVD~~TG~v~V~r~~~v~D~G~~iNP~~~~gQieGg~~qGlG~al~Ee~~~d~~~~~~~~-~G~~~t~~~~~Y~iP~~~d 1185 (1276)
|||++||+++|+|+++++|||++|||.+++||||||++||||++|+|++.|| + +|+++++||++|++|++.|
T Consensus 620 eVD~~TG~v~v~~~~~~~D~G~~iNP~~v~gQi~Gg~~qGiG~aL~E~~~~d-------~~~G~~~~~~~~dY~ip~~~d 692 (759)
T PRK09970 620 EVDIALCKVTINRILNVHDSGHILNPLLAEGQVHGGMGMGIGWALFEEMIID-------EKTGVVRNPNLLDYKLPTMMD 692 (759)
T ss_pred EEeCCCCeEEEEEEEEEEEcCcccCHHHHHHHHHhHHHHHHHHHhcceeEEc-------CCCCeECCCChhhccCCCccc
Confidence 9999999999999999999999999999999999999999999999999998 5 4999999999999999999
Q ss_pred CCCccEEEEecCCCCCCCCCCCCcCCCCCccchhhHHHHHHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHhcc
Q 000805 1186 VPLKFNVSLLKGHPNVKAIHSSKAVGEPPFFLASSVFFAIKDAISAARADAGHTGWFPLDNPATPERIRMACLD 1259 (1276)
Q Consensus 1186 iP~~~~v~~~~~~~~~~~~~gaKgvGE~~~~~~~~v~~Ai~nAi~~A~~~~G~~~~~~~~~P~Tpe~i~~a~~~ 1259 (1276)
+|+ |+|.++++ +++.+|||+||+||+++. ++++||+|||++|+ |++ ++++|+|||+||+++++
T Consensus 693 ~P~-i~v~~ve~-~~~~~p~GaKgvGE~~~~---~~~~AIanAi~~A~---G~r---~~~lP~tpe~v~~al~~ 755 (759)
T PRK09970 693 LPQ-LESAFVEI-YEPQSAYGHKSLGEPPII---SPAPAIRNAVLMAT---GVA---INTLPMTPQRLFEEFKE 755 (759)
T ss_pred CCC-eEEEEEec-CCCCCCCCCcccCCCccc---chHHHHHHHHHHhh---CCC---cCCCCCCHHHHHHHHHh
Confidence 995 99999997 899999999999999986 46889999999997 886 68999999999999865
No 12
>TIGR03196 pucD xanthine dehydrogenase D subunit. This gene has been characterized in B. subtilis as the molybdopterin binding-subunit of xanthine dehydrogenase (pucD), acting in conjunction with pucC, the FAD-binding subunit and pucE, the FeS-binding subunit. The more common XDH complex (GenProp0640) includes the xdhB gene which is related to pucD. It appears that most of the relatives of pucD outside of this narrow clade are involved in other processes as they are found in unrelated genomic contexts, contain the more common XDH complex and/or do not appear to process purines to allantoin.
Probab=100.00 E-value=2.1e-145 Score=1377.72 Aligned_cols=713 Identities=28% Similarity=0.371 Sum_probs=628.8
Q ss_pred cCCCccc-ccCccccccceeEecccCCCCCCcEEEEEEeCCCCCeEEEEeeCccccCCCCEEEEEecCCCCCCCCCCCCC
Q 000805 512 SVGSPEV-HLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGFVGIFFAEDVQGDNRIGPVV 590 (1276)
Q Consensus 512 ~vGk~~~-r~d~~~kvtG~a~Y~~Di~~~~gmL~a~~vrSp~a~a~I~sID~s~A~~~pGV~~vvt~~Dipg~n~~~~~~ 590 (1276)
+|||+++ |+|++.||||+++|++|+++ |||||++++|||++||+|++||+++|+++|||++|+|.+|+|+.|.+|...
T Consensus 2 ~iG~~~~~R~d~~~kvtG~a~Y~~Di~~-pgmL~a~~vrSp~aha~I~siD~s~A~a~pGV~~V~t~~D~p~~~~~g~~~ 80 (768)
T TIGR03196 2 GIGKPSRVRPDGPDKVTGEFKYMGDLRF-PGMLHAKTLRSAHAHAEIRRVCTDAAEKLEGVQAMVTAADVPGLARFGIII 80 (768)
T ss_pred cCCCcCCcCcchHhhCcccccccccCCC-CCcEEEEEEecCCCcEEEeeccHHHHHhCCCcEEEEehHHCCCCCCCCccC
Confidence 4899999 99999999999999999998 899999999999999999999999999999999999999999766566656
Q ss_pred CcccccccCeEeecCCeEEEEEECCHHHHHHhcccceeeEeecCCCCCHHHHHhcCC--CCC--C--CcceeecCCcccc
Q 000805 591 ADEELFASEVVTCVGQVIGVVVAETHEEAKLASRKVQVEYEELPAILSIQEAIDAKS--FHP--N--TERCFRKGDVDIC 664 (1276)
Q Consensus 591 ~d~~~~a~~~V~y~GqpVa~VvAet~~~A~~Aa~~V~V~ye~lp~v~~~~~A~~~~s--~~~--~--~~~~~~~Gd~~~a 664 (1276)
.++|+|++++|||+|||||+|||+|+|+|++|+++|+|+||+||+++|+++|+++++ +|+ | .......||++++
T Consensus 81 ~~~~~la~~~Vr~~G~~VA~VvA~t~~~A~~A~~~v~Veye~lp~v~d~~~a~~~~a~~i~~~~ni~~~~~~~~Gd~~~a 160 (768)
T TIGR03196 81 ADQPVFAADEIRYAGDAIAAVAAEDEEIAEAALAAIEVDYEELAPMDDPDKALQPDAEPLHEAGNILHEAEFRHGDPDEG 160 (768)
T ss_pred CCcccccCCEEEEcCCeEEEEEECCHHHHHHHhccCceEEEeCCCcCCHHHHhcCCCCeECCCCcCcceeeeccCCHhHH
Confidence 789999999999999999999999999999999999999999999999999998764 342 1 1234578999999
Q ss_pred cccCCCccEEEEEEEeCcccccCCCCCeeEEEEecCCCeEEEEeCCCChHHHHHHHHHHhCCCCCcEEEEecccCCCCCC
Q 000805 665 FQSGQCDKIIEGEVRVGGQEHFYLEPHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGG 744 (1276)
Q Consensus 665 f~~~~a~~vve~~~~~~~~~H~~mEp~~~~a~~~~~~g~l~V~~stQ~p~~~r~~vA~~Lglp~~kV~V~~~~vGGgFGg 744 (1276)
| ++|+++||++|++++|+|++|||++|+|+|+ ++|+|+||+|||+|+.+|..||++||||++||||+++++|||||+
T Consensus 161 f--~~a~~vve~~y~~~~~~h~~mEp~~~~A~~~-~~g~l~v~~stQ~p~~~r~~lA~~Lglp~~~VrV~~~~vGGgFG~ 237 (768)
T TIGR03196 161 F--AAGDTVFEDQYELGMQDHAFLAPEAALAMPA-ADGGFDLRAATQHGHKDREQIAACFDIPEEKIRITLAGMGGAFGG 237 (768)
T ss_pred h--ccCCEEEEEEEEeCCeeeeecCCceEEEEEc-CCCCEEEEECCCchHHHHHHHHHHhCCCHHHEEEEeCCCCCccCC
Confidence 9 9999999999999999999999999999997 467899999999999999999999999999999999999999999
Q ss_pred CCCcchHHHHHHHHHHHhCCCCEEEEechHHHHhhcCCCCCeEEEEEEEECCCCcEEEEEEEEEecCCCCCCchHHHHHH
Q 000805 745 KETRSAFIAAAAAVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLEIYNNAGNSLDLSLAVLER 824 (1276)
Q Consensus 745 K~~~~~~~a~~aAlaA~~~grPVkl~~tR~ed~~~~~~R~~~~~~~k~g~~~dG~i~a~~~~~~~d~Ga~~~~~~~v~~~ 824 (1276)
|.... ..+.||++|+++||||||+|||+|+|+.+++||++.+++|+|+|+||+|++++++++.|+|+|.+++..+...
T Consensus 238 K~~~~--~~~~aa~~A~~~gRPVk~~~sReE~~~~~~~r~~~~~~~k~g~~~dG~i~a~~~~~~~d~Gay~~~~~~v~~~ 315 (768)
T TIGR03196 238 KDDLN--IQIHAALLALASGLPVKIAQDRKESFLGGIHRHPAKITFKHGADADGNLLAHDAKIVADGGAYASLGPAVLAF 315 (768)
T ss_pred ccccc--HHHHHHHHHHHhCCCEEEEechHHhhhcCCCCCCeEEEEEEEECCCCcEEEEEEEEEecccccCCccHHHHHH
Confidence 98753 3577899999999999999999999999999999999999999999999999999999999998888777777
Q ss_pred HhhccCCCcccCeEEEEEEEEecCCCCCCcccCCChhhhHhHHHHHHHHHHHHcCCCHHHHHHHhcCCCCCccccCcccc
Q 000805 825 AMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITENWIQRVAVEVRKSPEEIREINFQGEGSILHYGQQLQ 904 (1276)
Q Consensus 825 ~~~~~~~~Y~ipn~~~~~~~v~TN~~~~~a~Rg~G~~q~~fa~E~~md~lA~~lg~DP~e~R~~Nl~~~g~~~~~g~~~~ 904 (1276)
+..++.++|++||++++++.|+||++|+++|||||.+|+.|++|++||++|++|||||+|||++|+.++|+.+++|+++.
T Consensus 316 ~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~Rg~G~~q~~fa~E~~mDelA~~lg~DP~e~R~~Nl~~~g~~~~~g~~~~ 395 (768)
T TIGR03196 316 AVEHAAGPYRIPNAHLEGISVFTNNGPAGAFRGFGGNQITFAHEAHLDRLADALGIDPLDLRRKNARKPGDLGPLEHRIA 395 (768)
T ss_pred HHHhcCCCcccceEEEEEEEEEcCCCCCCccCCCChhHHHHHHHHHHHHHHHHhCcCHHHHHHHhCCCCCCcCCCCcccC
Confidence 77788999999999999999999999999999999999999999999999999999999999999999999999999986
Q ss_pred -CCCHHHHHHHHHHhCCCh-----hhHHhHhhhh------ccCCccccceEEEeeeeccccccccCCc--eeEEEEEecC
Q 000805 905 -HCTLFPLWNELKLSCDFL-----NARKEVDNFN------LNNRWKKRGIAMVPTKFGISFTLKLMNQ--AGALVHVYTD 970 (1276)
Q Consensus 905 -~~~l~~~l~~~~~~~~~~-----~r~~~~~~fn------~~~~~~~rGia~~~~~~g~~~~~~~~~~--~~a~V~l~~D 970 (1276)
+..+++||++++++++|. ++......|+ +++.+++||+++++..++.++.....+. +++.|+|++|
T Consensus 396 ~~~~~~~~l~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~g~~~rGiG~a~~~~~~~~~~~~~~~~~~~a~v~l~~d 475 (768)
T TIGR03196 396 APDGAAEVIEAIASRPLPKAPILKKANRAVTALPGGRPAAAECGRLQRGTGAAIAMHGGGFGEGMDDAAVAGARLELAED 475 (768)
T ss_pred CcCCHHHHHHHHHhhccccchhhhhhhhhhhhhhhhhhhhhhcCCeeEEEEEEEEEecccCCCCccccCCccEEEEEeCC
Confidence 788999999999999998 3322222222 1122345677777776665543211122 3789999999
Q ss_pred Ce--EEEEEcCccCCcchHHHHHHHHHHHhCCCcccEEEecCCCCCCCCCCCCccchhhhHHHHHHHHHHHHHHHHHHHh
Q 000805 971 GT--VLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETSTDKVPNASPTAASASSDIYGAAVLDACEQIKARMEPI 1048 (1276)
Q Consensus 971 Gs--V~V~~g~~e~GqG~~T~~~qiaAe~Lgip~~~V~v~~~dT~~~p~~~~t~~Sr~t~~~g~Av~~Ac~~l~~rl~~~ 1048 (1276)
|+ |+|.+|++|||||++|+++|||||+||||+|+|+|..+||+.+|++++|+|||+|++.|.||++||++||+||+++
T Consensus 476 Gsv~v~v~~g~~d~GQG~~T~~aQiaAe~LGip~e~V~v~~~DT~~~p~~~gt~~Sr~t~~~G~Av~~Aa~~l~~kl~~~ 555 (768)
T TIGR03196 476 GTVKIRAHFACAECGQGFLAAAEQIAMEELGCAAEDISIAIADTAKGPKAGSSSASRGTSMSGGAIQGACAAFAAQLKAR 555 (768)
T ss_pred CCeEEEEEECCCCcCCCHHHHHHHHHHHHhCCCHHHEEEecCCCCCCCCCCCCchhhhhHhHHHHHHHHHHHHHHHHHHH
Confidence 96 8899999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred hhc------------CC------------------CCCHHHHHHHhhccCcceeEEEEe-ecCCccccccCCCCCCcccc
Q 000805 1049 ASK------------HN------------------FNSFAELASACYVQRIDLSAHGFY-ITPEIDFDWITGKGNPFRYF 1097 (1276)
Q Consensus 1049 ~~~------------~~------------------~~~~~~~~~~a~~~~~~l~~~~~~-~~~~~~~~~~~~~g~~~~~~ 1097 (1276)
++. .. .++|.+++. ...+.+.+.| ..|...++...+.+.++.+|
T Consensus 556 aa~~l~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 630 (768)
T TIGR03196 556 AAETAGLPAEVVEAPAENLIPGAAEIVGDKNEAALRVPLAEAAA-----DGPIAAETAFHDFPTSALDADVGQGDGHFAF 630 (768)
T ss_pred HHHHhCCChhhEEEeCCeeeecccceeeecCCCcceEEHHHHhc-----cccceeeeccccCCCcccccccccCCCcccc
Confidence 542 00 134555542 1123344433 22222222222233445678
Q ss_pred cEEEEEEEEEeeCCCCcEEEeEEEEEEecCcccChhhhhhhhhhHHHHHHHHHhcceEEecCCCCccCCCCccccCCCCC
Q 000805 1098 TYGAAFAEVEIDTLTGDFHTRMANVILDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPGCLYTCGPGS 1177 (1276)
Q Consensus 1098 ~~ga~~~eVEVD~~TG~v~V~r~~~v~D~G~~iNP~~~~gQieGg~~qGlG~al~Ee~~~d~~~~~~~~~G~~~t~~~~~ 1177 (1276)
+||||++|||||++||+++|+|+++++|||++|||.+++||||||++||||++|+|++.|| +|+++|.||++
T Consensus 631 ~~ga~~~eveVd~~tG~v~v~~~~~~~D~G~~iNp~~~~gQi~Gg~~~Gig~al~E~~~~~--------~G~~~~~~~~~ 702 (768)
T TIGR03196 631 AAAAAAAEVDVDLDLGDVKLIDCAHAIAAGPVLNPLALRGQIEGGAAMALGLALMEEAKMT--------DGRVAAENFDD 702 (768)
T ss_pred cceEEEEEEEEECCCCcEEEEEEEEEEECCCccCHHHHHHHHHHHHHHHHHHHHhCCeEec--------CCeECCCCccc
Confidence 9999999999999999999999999999999999999999999999999999999999996 69999999999
Q ss_pred CCCCCCCCCCCccEEEEecCCCCCCCCCCCCcCCCCCccchhhHHHHHHHHHHHHHHhcCCCcccCCCCCCCHHHHH
Q 000805 1178 YKIPSLNDVPLKFNVSLLKGHPNVKAIHSSKAVGEPPFFLASSVFFAIKDAISAARADAGHTGWFPLDNPATPERIR 1254 (1276)
Q Consensus 1178 Y~iP~~~diP~~~~v~~~~~~~~~~~~~gaKgvGE~~~~~~~~v~~Ai~nAi~~A~~~~G~~~~~~~~~P~Tpe~i~ 1254 (1276)
|++|++.|+|+ +++.++++ +++.+|||+||+||+++++ +++||.|||++|+ |++ ++++|+|||+|+
T Consensus 703 Y~~p~~~d~P~-~~~~~~~~-~~~~~p~G~kG~GE~~~~~---~~~AianAi~~A~---G~r---~~~lP~tpe~v~ 768 (768)
T TIGR03196 703 YLIPGIADVPD-LDFIAIED-LMKDAPYGPKGVGEAGTCA---ATPAIIAAIHDAV---GCD---INKLPIRPEDLL 768 (768)
T ss_pred ccCCChhhCCC-eEEEEEeC-CCCCCCCCCccCcCccccc---hHHHHHHHHHHHh---CcC---cccCCCChhhCC
Confidence 99999999995 89999987 8999999999999999975 5778888888887 886 689999999984
No 13
>TIGR02416 CO_dehy_Mo_lg carbon-monoxide dehydrogenase, large subunit. This model represents the large subunits of group of carbon-monoxide dehydrogenases that include molybdenum as part of the enzymatic cofactor. There are various forms of carbon-monoxide dehydrogenase; Salicibacter pomeroyi DSS-3, for example, has two forms. Note that, at least in some species, the active site Cys is modified with a selenium attached to (rather than replacing) the sulfur atom. This is termed selanylcysteine, and created post-translationally, in contrast to selenocysteine incorporation during translation as for many other selenoproteins.
Probab=100.00 E-value=9.8e-145 Score=1375.97 Aligned_cols=703 Identities=25% Similarity=0.306 Sum_probs=614.3
Q ss_pred CccccccceeEecccCCCCCCcEEEEEEeCCCCCeEEEEeeCccccCCCCEEEEEecCCCCCCCCC--CCCC-Ccccccc
Q 000805 521 SSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGFVGIFFAEDVQGDNRI--GPVV-ADEELFA 597 (1276)
Q Consensus 521 d~~~kvtG~a~Y~~Di~~~~gmL~a~~vrSp~a~a~I~sID~s~A~~~pGV~~vvt~~Dipg~n~~--~~~~-~d~~~~a 597 (1276)
|+.++|||+++|++|+.+ |||||+++||||++||+|++||+|+|+++|||++|+|++|+|+.+.. +... .++|+|+
T Consensus 1 e~~r~vtG~a~Y~~Di~~-pgmL~a~~vrSp~aha~I~~ID~s~A~~~pGV~~V~t~~D~p~~~~~~~~~~~~~~~~~la 79 (770)
T TIGR02416 1 EDIRFIQGKGNYVDDVKL-PGMLHGDIVRSPHAHARIKSIDTSAAKALPGVFAVLTAADLKPLNLHWMPTLAGDVQAVLA 79 (770)
T ss_pred CCcccccccccccccCCC-CCCEEEEEEcCCCccEEEecccHHHHhhCCCcEEEEEHHHcCCccCCcCCCCCCCCcccCc
Confidence 567899999999999998 89999999999999999999999999999999999999999865421 2111 2378999
Q ss_pred cCeEeecCCeEEEEEECCHHHHHHhcccceeeEeecCCCCCHHHHHhcCCC--CCCC----------------ccee---
Q 000805 598 SEVVTCVGQVIGVVVAETHEEAKLASRKVQVEYEELPAILSIQEAIDAKSF--HPNT----------------ERCF--- 656 (1276)
Q Consensus 598 ~~~V~y~GqpVa~VvAet~~~A~~Aa~~V~V~ye~lp~v~~~~~A~~~~s~--~~~~----------------~~~~--- 656 (1276)
+++|||+|||||+|||+|+++|++|+++|+|+||+||+++|+++|++.++. |++. ....
T Consensus 80 ~~~Vry~Ge~Va~VvA~t~~~A~~A~~~v~V~ye~lp~v~d~~~A~~~~a~~ih~~~~~~~~~~~~~~n~~~~~~~~~~g 159 (770)
T TIGR02416 80 DEKVLFQNQEVAFVVAKDRYVAADAIELVEVDYEPLPVVIDPFKALEPDAPVLREDLKGKTTGAHGARKHHNHIFRWEIG 159 (770)
T ss_pred CCEEEEcCCcEEEEEECCHHHHHHHhccceeeeecCCccCCHHHHhcCCCceecCCCCCccccccccccccceeeEEecC
Confidence 999999999999999999999999999999999999999999999987763 4310 0112
Q ss_pred ecCCcccccccCCCccEEEEEEEeCcccccCCCCCeeEEEEecCCCeEEEEeCCCChHHHHHHHHHHhCCCCCcEEEEec
Q 000805 657 RKGDVDICFQSGQCDKIIEGEVRVGGQEHFYLEPHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTK 736 (1276)
Q Consensus 657 ~~Gd~~~af~~~~a~~vve~~~~~~~~~H~~mEp~~~~a~~~~~~g~l~V~~stQ~p~~~r~~vA~~Lglp~~kV~V~~~ 736 (1276)
+.||++++| ++|++|||++|++++|+|++|||++|+|+|++++|+|+||+|||+|+.+|..||++||||.+||||+++
T Consensus 160 d~gd~~~af--~~a~~vve~~~~~~~~~h~~mEp~~~iA~~~~~~g~l~v~~stQ~p~~~r~~vA~~Lglp~~~VrV~~~ 237 (770)
T TIGR02416 160 DKAATDAVF--AKAEVVVKQMMTYPRVHPSPLETCGCVASMDPIKGELTLWGTFQAPHVIRTVVSLISGLPEHKIRVISP 237 (770)
T ss_pred CccchhHHh--ccCCEEEEEEEEeCceeeEcCCCCeEEEEEeCCCCeEEEEECCCcHHHHHHHHHHHhCCCHHHEEEEcC
Confidence 345579999 999999999999999999999999999999843688999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCcchHHHHHHHHHHHhCCCCEEEEechHHHHhhcCCCCCeEEEEEEEECCCCcEEEEEEEEEecCCCCCC
Q 000805 737 RIGGGFGGKETRSAFIAAAAAVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLEIYNNAGNSLD 816 (1276)
Q Consensus 737 ~vGGgFGgK~~~~~~~a~~aAlaA~~~grPVkl~~tR~ed~~~~~~R~~~~~~~k~g~~~dG~i~a~~~~~~~d~Ga~~~ 816 (1276)
++|||||+|...... .+.||++|+++||||||+|||+|+|+.+++||++.+++|+|+|+||+|++++++++.|+|+|.+
T Consensus 238 ~vGGgFG~K~~~~~~-~~~aa~~A~~~gRPVk~~~sR~E~~~~~~~r~~~~~~~k~g~d~dG~i~a~~~~~~~d~Gay~~ 316 (770)
T TIGR02416 238 DIGGGFGNKVGIYPG-YVCAIVASIVLGVPVKWVEDRMENLSTTSFARDYHMTGELAATKDGKILAMRCNVLADHGAFDA 316 (770)
T ss_pred CCCCCcccccccccH-HHHHHHHHHHhCCCEEEecchHHhhhcCCCCCceEEEEEEEECCCCcEEEEEEEEEeeccccCC
Confidence 999999999875333 2458899999999999999999999999999999999999999999999999999999999987
Q ss_pred chHHHHHHHhh--ccCCCcccCeEEEEEEEEecCCCCCC-ccc-CCChhhhHhHHHHHHHHHHHHcCCCHHHHHHHhcCC
Q 000805 817 LSLAVLERAMF--HSDNVYEIPNVRIMGNVCFTNFPSNT-AFR-GFGGPQGMLITENWIQRVAVEVRKSPEEIREINFQG 892 (1276)
Q Consensus 817 ~~~~v~~~~~~--~~~~~Y~ipn~~~~~~~v~TN~~~~~-a~R-g~G~~q~~fa~E~~md~lA~~lg~DP~e~R~~Nl~~ 892 (1276)
++..+...... .+.++|+|||++++++.|+||++|.+ +|| |||.+|++|++|++||++|++|||||+|||++|+++
T Consensus 317 ~~~~~~~~~~~~~~~~g~Y~ipn~~~~~~~v~TN~~p~gta~Rgg~G~pq~~fa~E~~mD~~A~~lg~DP~e~R~~N~~~ 396 (770)
T TIGR02416 317 CADPSKWPAGFFNICTGSYDIPVAHCAVDGVYTNKAPGGVAYRCSFRVTEAVYAIERAVDTLAQRLEMDSADLRIKNFIQ 396 (770)
T ss_pred CccchhhhhhhhhhcCCccccceEEEEEEEEECCCCCCCCccccCCccHHHHHHHHHHHHHHHHHhCcCHHHHHHHhCCC
Confidence 65544333222 47899999999999999999999997 999 899999999999999999999999999999999998
Q ss_pred CCC---ccccCccccCCCHHHHHHHHHHhCCChhhHHhHhhhhccCCc-cccceEEEeeeecccccc-ccC------Cce
Q 000805 893 EGS---ILHYGQQLQHCTLFPLWNELKLSCDFLNARKEVDNFNLNNRW-KKRGIAMVPTKFGISFTL-KLM------NQA 961 (1276)
Q Consensus 893 ~g~---~~~~g~~~~~~~l~~~l~~~~~~~~~~~r~~~~~~fn~~~~~-~~rGia~~~~~~g~~~~~-~~~------~~~ 961 (1276)
+++ .+++|+.+++..+++||+++++.++|++++++.+.+++.+++ ..||++++...++.+... ... .++
T Consensus 397 ~~~~p~~~~~g~~~~s~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~G~G~a~~~~~~~~~~~~~~~~~~~~~~~ 476 (770)
T TIGR02416 397 PEQFPYTAPLGWEYDSGDYPLAMKKAMDTVDYHQLRAEQAAKRKRGETRELMGIGISFFTEIVGAGPSKNCDILGVGMFD 476 (770)
T ss_pred CccCccccCCCceecCCCHHHHHHHHHHhcCchhhHHHHHHHHhcCCCCceEEEEEEEEEEeccCCCcccccccccCccc
Confidence 765 345688999999999999999999999877655444444442 134544443322222111 001 146
Q ss_pred eEEEEEecCCeEEEEEcCccCCcchHHHHHHHHHHHhCCCcccEEEecCCCCCCCCCCCCccchhhhHHHHHHHHHHHHH
Q 000805 962 GALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETSTDKVPNASPTAASASSDIYGAAVLDACEQI 1041 (1276)
Q Consensus 962 ~a~V~l~~DGsV~V~~g~~e~GqG~~T~~~qiaAe~Lgip~~~V~v~~~dT~~~p~~~~t~~Sr~t~~~g~Av~~Ac~~l 1041 (1276)
++.|+|++||+|+|.+|++|||||++|+++||+||+||||+|+|+|..+||+.+|++++|+|||+|.++|.||++||++|
T Consensus 477 ~a~v~l~~dG~v~v~~g~~e~GQG~~T~~aQiaAe~LGip~e~V~v~~~DT~~~p~~~gt~~Sr~t~~~G~Av~~Aa~~l 556 (770)
T TIGR02416 477 SCEIRIHPTGSAIARMGTKSQGQGHETTYAQIIATELGIPAEDIMVEEGDTDTAPYGLGTYGSRSTPVAGAATALAARKI 556 (770)
T ss_pred eEEEEECCCceEEEEECCCCCCCCchHHHHHHHHHHHCCCHHHEEEEecCCCCCCCCCCCchhHHHHHHHHHHHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhc----------------------CCCCCHHHHHHHhhccC-----cceeEEEEeecCCccccccCCCCCCc
Q 000805 1042 KARMEPIASK----------------------HNFNSFAELASACYVQR-----IDLSAHGFYITPEIDFDWITGKGNPF 1094 (1276)
Q Consensus 1042 ~~rl~~~~~~----------------------~~~~~~~~~~~~a~~~~-----~~l~~~~~~~~~~~~~~~~~~~g~~~ 1094 (1276)
|+||+++++. ...++|.+++..+|... .+|.+.++|..+.
T Consensus 557 ~~~l~~~aa~~l~~~~~~l~~~~g~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~------------- 623 (770)
T TIGR02416 557 KAKAQMIAAHMLEVHEGDLEWDVDRFRVKGDPSKFKTMADIAWAAYNSPPPGLEPGLEAVNYYDPPN------------- 623 (770)
T ss_pred HHHHHHHHHHHhCCCHHHEEEECCEEEECCCCCCcccHHHHHHHHhccCccCcCCceEEEEEeCCCC-------------
Confidence 9999888542 01268999998876431 2377777664321
Q ss_pred ccccEEEEEEEEEeeCCCCcEEEeEEEEEEecCcccChhhhhhhhhhHHHHHHHHHhcceEEecCCCCccCCCCccccCC
Q 000805 1095 RYFTYGAAFAEVEIDTLTGDFHTRMANVILDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPGCLYTCG 1174 (1276)
Q Consensus 1095 ~~~~~ga~~~eVEVD~~TG~v~V~r~~~v~D~G~~iNP~~~~gQieGg~~qGlG~al~Ee~~~d~~~~~~~~~G~~~t~~ 1174 (1276)
.+|+||+|++|||||++||+++|+|+++++|||++|||++++|||+||++||||++|+|++.|| ++|+++|.+
T Consensus 624 ~~~~~ga~~~eVeVD~~TG~v~v~~~~~~~D~G~~iNP~~~~GQi~Gg~~qGiG~aL~E~~~~d-------~~G~~l~~~ 696 (770)
T TIGR02416 624 MTYPFGAYFCVVDIDVDTGVAKVRRFYALDDCGTRINPMIIEGQIHGGLTEGFAVAMGQEIRFD-------EQGNVLGAS 696 (770)
T ss_pred CCCCceeEEEEEEEECCCCeEEEEEEEEEEECCCccCHHHHHHHHHhhHHHHHHHHHhCcceEC-------CCCCCCCCC
Confidence 2578999999999999999999999999999999999999999999999999999999999998 689999999
Q ss_pred CCCCCCCCCCCCCCccEEEEecCCCCCCCCCCCCcCCCCCccchhhHHHHHHHHHHHHHHhcCCCcccCCCCCCCHHHHH
Q 000805 1175 PGSYKIPSLNDVPLKFNVSLLKGHPNVKAIHSSKAVGEPPFFLASSVFFAIKDAISAARADAGHTGWFPLDNPATPERIR 1254 (1276)
Q Consensus 1175 ~~~Y~iP~~~diP~~~~v~~~~~~~~~~~~~gaKgvGE~~~~~~~~v~~Ai~nAi~~A~~~~G~~~~~~~~~P~Tpe~i~ 1254 (1276)
|++|++|++.|+|+ +++.++++ +++.+|||+||+||+++++ +++||+|||++|++++|++ ++++|+|||+||
T Consensus 697 ~~dY~iPta~DvP~-~~~~~~e~-~~~~~p~GaKGvGE~~~~~---~~aAianAI~dA~~~~Gv~---~~~lP~Tpe~v~ 768 (770)
T TIGR02416 697 LMDYFLPTAVETPH-WETDHTVT-PSPHHPIGAKGVGESPHVG---SVPCFSNAVVDAYAFLGVG---HIDMPHTAWRVW 768 (770)
T ss_pred hhhCcCCchhcCCC-eEEEEeec-CCCCCCCCccccCCccccc---HHHHHHHHHHHHHhhcCCC---cccCCCCHHHHh
Confidence 99999999999996 89999988 8999999999999999976 4678899999998777986 689999999998
Q ss_pred H
Q 000805 1255 M 1255 (1276)
Q Consensus 1255 ~ 1255 (1276)
+
T Consensus 769 ~ 769 (770)
T TIGR02416 769 K 769 (770)
T ss_pred h
Confidence 5
No 14
>COG1529 CoxL Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs [Energy production and conversion]
Probab=100.00 E-value=1.8e-114 Score=1090.53 Aligned_cols=700 Identities=29% Similarity=0.379 Sum_probs=612.5
Q ss_pred CCcCCCcccccCccccccceeEecccCCCCCCcEEEEEEeCCCCCeEEEEeeCccccCCCCEEEEEecCCCCC-CCCCCC
Q 000805 510 GTSVGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGFVGIFFAEDVQG-DNRIGP 588 (1276)
Q Consensus 510 ~~~vGk~~~r~d~~~kvtG~a~Y~~Di~~~~gmL~a~~vrSp~a~a~I~sID~s~A~~~pGV~~vvt~~Dipg-~n~~~~ 588 (1276)
...+|+++.|.|+..||||+++|++|+.. +||+|+++||||++|++|++||.++|+++|||++|+|++|+|. .+....
T Consensus 3 ~~~~gr~~~R~~~~~~vtG~~~y~~d~~~-~~~~~~~~vrs~~a~a~i~~id~~ea~~~~gv~av~ta~~l~~~~~~~~~ 81 (731)
T COG1529 3 AEIIGRSVLRADGLGKVTGKGRYADDIVA-PGMLYAAFVRSPYAHARIVSIDVSEAQGLPGVLAVITAEELPAWSPVRVE 81 (731)
T ss_pred cccCCCCcccccchhheeeeeheehhhcC-CCCceEEEEeccCCceEEEEechHHHhhCCCeEEEechhhCccccccccc
Confidence 45799999999999999999999999998 7999999999999999999999999999999999999999985 222111
Q ss_pred CCCcccccccCeEeecCCeEEEEEECCHHHHHHhcccceeeEeecCCCCCHHHHHhcCCC--CCC--CcceeecCCcccc
Q 000805 589 VVADEELFASEVVTCVGQVIGVVVAETHEEAKLASRKVQVEYEELPAILSIQEAIDAKSF--HPN--TERCFRKGDVDIC 664 (1276)
Q Consensus 589 ~~~d~~~~a~~~V~y~GqpVa~VvAet~~~A~~Aa~~V~V~ye~lp~v~~~~~A~~~~s~--~~~--~~~~~~~Gd~~~a 664 (1276)
.....++|+.++|+|.||+|++|+|+|+++|++|+++|+|+||++|++.++++++.++.. |+. .......||.+ +
T Consensus 82 ~~p~~~~l~~~~v~~~G~~vA~vva~d~~~A~~aa~~v~V~ye~l~~~v~~~~a~~~~~~~ih~~~n~~~~~~~g~~~-a 160 (731)
T COG1529 82 LAPADEVLARGKVRYTGEPVAAVVAEDEYQARAAAELVLVEYEALPPVVDPEEALAEDAPVIHDELNIARDATFGDDD-A 160 (731)
T ss_pred cCCcchhhccCceEEeCCeEEEEEeCCHHHHHHHHhhceeeeccCCCcCCHHHHhcCCCcccccccccccccccccch-h
Confidence 112222789999999999999999999999999999999999999999999999998763 441 24455677888 9
Q ss_pred cccCCCccEEEEEEEeCcccccCCCCCeeEEEEecCCCeEEEEeCCCChHHHHHHHHHHhCCCCCcEEEEecccCCCCCC
Q 000805 665 FQSGQCDKIIEGEVRVGGQEHFYLEPHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGG 744 (1276)
Q Consensus 665 f~~~~a~~vve~~~~~~~~~H~~mEp~~~~a~~~~~~g~l~V~~stQ~p~~~r~~vA~~Lglp~~kV~V~~~~vGGgFGg 744 (1276)
| ++|+++++.+|.++.+.|.+|||++++++|+ ++++|++|++||+|+.++..++++|++|+++|||+++++|||||+
T Consensus 161 ~--a~A~~~v~~~~~~~~~~~~~~E~~g~~a~~~-d~~~lt~~~~tQ~~~~~~~~l~~~l~~p~~~vrvi~~dvGggfG~ 237 (731)
T COG1529 161 F--AAAAVVVEAPYKTPRKDPNPMEPHGVVAVPD-DGDKLTVWASTQIPHRLRGMLAAVLGIPPSKVRVISPDVGGGFGS 237 (731)
T ss_pred h--hcCcEEeeeeeeccCcCccCcccccceeeEc-CCCeEEEEEccCCchHHHHHHHHHhCCCHHHeEEecCCCCcccCC
Confidence 9 9999999999999999999999999999998 455999999999999999999999999999999999999999999
Q ss_pred CCCcchHHHHHHHHHHHhCCCCEEEEechHHHHhhcCCCCCeEEEEEEEECCCCcEEEEEEEEEecCCCCCCchHHHHHH
Q 000805 745 KETRSAFIAAAAAVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLEIYNNAGNSLDLSLAVLER 824 (1276)
Q Consensus 745 K~~~~~~~a~~aAlaA~~~grPVkl~~tR~ed~~~~~~R~~~~~~~k~g~~~dG~i~a~~~~~~~d~Ga~~~~~~~v~~~ 824 (1276)
|... +.....++++|+++||||||+++|+|.|+.+.+||+...++++++++||+|+++.+++..|.|+|. +..+...
T Consensus 238 K~~~-~~~~~~~~~aa~~~grpVk~~~tR~e~~~~~~~~~~~~~~~~~~a~~dg~l~~~~~~~~~~~Gay~--~~~~~~~ 314 (731)
T COG1529 238 KGVV-YVEEILAALAAVVAGRPVKWIETREELFVATGHRRATLIDVKLGADKDGRLLAIKGTVAADTGAYN--GPTVPAA 314 (731)
T ss_pred cccc-eeHHHHHHHHHHhcCCCeEEecchHHhhhccCCCCCceEEeeeecCcCCcEEeeeeeEEecCCCcc--ccchhHH
Confidence 9875 445667779999999999999999999999999999999999999999999999999999999996 4445666
Q ss_pred HhhccCCCcccCeEEEEEEEEecCCCCCCcccCCChhhhHhHHHHHHHHHHHHcCCCHHHHHHHhcCCCCCccccCcccc
Q 000805 825 AMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITENWIQRVAVEVRKSPEEIREINFQGEGSILHYGQQLQ 904 (1276)
Q Consensus 825 ~~~~~~~~Y~ipn~~~~~~~v~TN~~~~~a~Rg~G~~q~~fa~E~~md~lA~~lg~DP~e~R~~Nl~~~g~~~~~g~~~~ 904 (1276)
...++.++|.|+|+++..+.++||++|+++|||+|.++++|++|++||+||++|||||+|+|++|++..|... ++..++
T Consensus 315 ~~~~~~g~Y~i~~~~~~~~~v~tn~~p~~~~Rg~g~~~~~~a~E~~~d~lA~~Lgidp~eiR~~n~~~~g~~~-~~~~~~ 393 (731)
T COG1529 315 AAGLARGPYKIEAVYIEPYLVHTNMPPNGAYRGAGRPEGTFALERAVDELAEELGIDPVEIRLRNLIRGGPFG-LGRRYD 393 (731)
T ss_pred HHHhcCCceecccceeeeEEEEcCCCCCcccccCCCchhHHHHHHHHHHHHHHhCCCHHHHhhhhccccCCCC-Cccccc
Confidence 7778899999999999999999999999999999999999999999999999999999999999999887766 677888
Q ss_pred CCCHHHHHHHHHHhCCChhhHHhHhhhhccCCccccceEEEeeeeccccccccCCceeEEEEEecCCeEEEEEcCccCCc
Q 000805 905 HCTLFPLWNELKLSCDFLNARKEVDNFNLNNRWKKRGIAMVPTKFGISFTLKLMNQAGALVHVYTDGTVLVTHGGVEMGQ 984 (1276)
Q Consensus 905 ~~~l~~~l~~~~~~~~~~~r~~~~~~fn~~~~~~~rGia~~~~~~g~~~~~~~~~~~~a~V~l~~DGsV~V~~g~~e~Gq 984 (1276)
+.++.+|+++++++.+|.++..+....+..+.++|+|+++ ..+++.+.. .+.+.|+++.||+++|.+|.+++||
T Consensus 394 ~~~~~~~~~~~ak~~~~~~~~~k~~~~re~~~~~G~g~a~--~~~~~~~~~----~~~a~v~~~~~g~v~v~~g~~~~G~ 467 (731)
T COG1529 394 SGDYLEELDEAAKRFGWSERPVKPIWTREGDLRRGVGRAM--YTEPSGAGP----GEGARVRLEADGTVTVRTGATDIGQ 467 (731)
T ss_pred CccHHHHHHHHHHhcCcccccCChhhhhcCCeeeeeEEEE--EEEeccCCC----CCcEEEEEcCCCcEEEEECCccCCC
Confidence 9999999999999999987655444433333333444444 444443321 1569999999999999999999999
Q ss_pred chHHHHHHHHHHHhCCCcccEEEecCCCCCCCCCCCCccchhhhHHHHHHHHHHHHHHHHHHHhhhcCC-----------
Q 000805 985 GLHTKVAQVAASAFNIPLSSVFVSETSTDKVPNASPTAASASSDIYGAAVLDACEQIKARMEPIASKHN----------- 1053 (1276)
Q Consensus 985 G~~T~~~qiaAe~Lgip~~~V~v~~~dT~~~p~~~~t~~Sr~t~~~g~Av~~Ac~~l~~rl~~~~~~~~----------- 1053 (1276)
|++|.++|++|+.||||.++|++..+||+..+.+++|+|||++.+.+.|+++||++|++++...+...-
T Consensus 468 G~~t~~~q~~ae~lgip~~~V~v~~gDt~~~~~~~~s~GS~~~~~~~~A~~~a~~~l~~k~~~~aa~~l~~~~~~~~~~~ 547 (731)
T COG1529 468 GTDTVLAQIAAEELGIPPDDVEVVHGDTDVPVGGWGSVGSRGTAVAGSAVIDAAAKLAEKDPVAAARMLGADAEDVVLED 547 (731)
T ss_pred cHHHHHHHHHHHHhCCCHHHEEEEecCCCCCCCCCCCcCcccccchHHHHHHHHHHHHHHHHHHHHhhhCCChhHeeecc
Confidence 999999999999999999999999999999999999999999999999999999999988866543200
Q ss_pred ---------C---CCHHHHHHHhhccCcceeEEEEeecCCccccccCCCCCCcccccEEEEEEEEEeeCCCCcEEEeEEE
Q 000805 1054 ---------F---NSFAELASACYVQRIDLSAHGFYITPEIDFDWITGKGNPFRYFTYGAAFAEVEIDTLTGDFHTRMAN 1121 (1276)
Q Consensus 1054 ---------~---~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~ga~~~eVEVD~~TG~v~V~r~~ 1121 (1276)
. .+|.+.+.... ...+...++|. ...+|+||||++|||||++||++||+|++
T Consensus 548 g~~~~~~~~~~~~~~~~~~a~~~~--~~~~~~~~~~~--------------~~~~~~~~A~~~EV~Vd~~tG~vrV~r~~ 611 (731)
T COG1529 548 GAFKVGGGDRRSAVSLKEVAGKGL--APGLAVAASFG--------------SDNTYPYGAHIAEVEVDPETGEVRVLRVV 611 (731)
T ss_pred CeeeeccCCccceeeHHHhhhccc--cCccccccccc--------------ccccccceeEEEEEEEECCCCcEEEEEEE
Confidence 0 23444443320 01111111111 01168899999999999999999999999
Q ss_pred EEEecCcccChhhhhhhhhhHHHHHHHHHhcceEEecCCCCccCCCCccccCCCCCCCCCCCCCCCCccEEEEecCCCCC
Q 000805 1122 VILDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPGCLYTCGPGSYKIPSLNDVPLKFNVSLLKGHPNV 1201 (1276)
Q Consensus 1122 ~v~D~G~~iNP~~~~gQieGg~~qGlG~al~Ee~~~d~~~~~~~~~G~~~t~~~~~Y~iP~~~diP~~~~v~~~~~~~~~ 1201 (1276)
+++|||++|||++++|||+||++||||++|+|+.+|| ++|+++|.||.+|.||++.|+|. ++|+++++ |++
T Consensus 612 ~~~D~G~vvNP~~~~~Qv~GGi~~Gig~aL~E~~i~d-------~~g~~~~~n~~dY~ip~~~d~P~-iev~~v~~-p~~ 682 (731)
T COG1529 612 AVDDCGRVVNPKLAEGQVEGGILMGIGMALYEEAIYD-------EDGQLLNSNLADYGIPRAADAPE-VEVEFVES-PSP 682 (731)
T ss_pred EEEecCCccCHHHHHHHHHhHHHHHHHHHhhccceEC-------CCCCcCCCCcccccCCCcccCCc-eEEEEecC-CCC
Confidence 9999999999999999999999999999999999999 79999999999999999999997 99999998 688
Q ss_pred CCCCCCCcCCCCCccchhhHHHHHHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHhc
Q 000805 1202 KAIHSSKAVGEPPFFLASSVFFAIKDAISAARADAGHTGWFPLDNPATPERIRMACL 1258 (1276)
Q Consensus 1202 ~~~~gaKgvGE~~~~~~~~v~~Ai~nAi~~A~~~~G~~~~~~~~~P~Tpe~i~~a~~ 1258 (1276)
.+|+|+|||||+++++ +++||+|||++|+ |++ ++++|+|||+|+.++.
T Consensus 683 ~~p~g~kGvGE~g~~~---~~pAvaNAV~~At---Gkr---i~~lP~tp~~i~~al~ 730 (731)
T COG1529 683 FGPLGAKGVGEGGIIG---IAPAIANAVFDAT---GKR---IRDLPITPERILAALR 730 (731)
T ss_pred CCCCCCCCcCcCccCc---hhHHHHHHHHHHh---CCc---cccCCCCHHHHHHhhh
Confidence 8899999999999975 5789999999997 886 6899999999999875
No 15
>PF02738 Ald_Xan_dh_C2: Molybdopterin-binding domain of aldehyde dehydrogenase; InterPro: IPR008274 Aldehyde oxidase (1.2.3.1 from EC) catalyses the conversion of an aldehyde in the presence of oxygen and water to an acid and hydrogen peroxide. The enzyme is a homodimer, and requires FAD, molybdenum and two 2FE-2S clusters as cofactors. Xanthine dehydrogenase (1.1.1.204 from EC) catalyses the hydrogenation of xanthine to urate, and also requires FAD, molybdenum and two 2FE-2S clusters as cofactors. This activity is often found in a bifunctional enzyme with xanthine oxidase (1.1.3.22 from EC) activity too. The enzyme can be converted from the dehydrogenase form to the oxidase form irreversibly by proteolysis or reversibly through oxidation of sulphydryl groups.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3NVZ_C 3NVY_C 1FO4_B 3NRZ_L 3AM9_A 3B9J_C 3AX7_B 3NVW_L 3BDJ_A 3ETR_N ....
Probab=100.00 E-value=2.8e-105 Score=989.70 Aligned_cols=524 Identities=35% Similarity=0.500 Sum_probs=435.6
Q ss_pred cceeecCCcccccccCCCccEEEEEEEeCcccccCCCCCeeEEEEecCCCeEEEEeCCCChHHHHHHHHHHhCCCCCcEE
Q 000805 653 ERCFRKGDVDICFQSGQCDKIIEGEVRVGGQEHFYLEPHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVV 732 (1276)
Q Consensus 653 ~~~~~~Gd~~~af~~~~a~~vve~~~~~~~~~H~~mEp~~~~a~~~~~~g~l~V~~stQ~p~~~r~~vA~~Lglp~~kV~ 732 (1276)
...+++||+|++| ++|+++||++|++++++|++|||++|+|+|+ ++|+|+||++||+|+.+|..||++||||++|||
T Consensus 15 ~~~~~~GDve~af--~~a~~vve~~y~~~~~~h~~mEp~~~~A~~~-~~g~l~v~~~tQ~p~~~r~~va~~lglp~~~V~ 91 (547)
T PF02738_consen 15 ERHIERGDVEAAF--AEADHVVEAEYRTPRQAHAPMEPHGAVAWWD-EDGRLTVWSSTQWPFHVRRAVAEALGLPPEKVR 91 (547)
T ss_dssp EEEEEESSHHHHH--HHTSEEEEEEEEE-BB----SS-SEEEEEEE-TTTEEEEEES-SSHHHHHHHHHHHHTS-GGGEE
T ss_pred ccccccCCHHHHH--hhCCEEEEEEEEECCccccCCCCCeEEEEEc-cCCCEEEEECCcCHhHHHHHHhhhhcCChhHEE
Confidence 4567899999999 9999999999999999999999999999998 688999999999999999999999999999999
Q ss_pred EEecccCCCCCCCCCcchHHHHHHHHHHHhCCCCEEEEechHHHHhhcCCCCCeEEEEEEEECCCCcEEEEEEEEEecCC
Q 000805 733 CKTKRIGGGFGGKETRSAFIAAAAAVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLEIYNNAG 812 (1276)
Q Consensus 733 V~~~~vGGgFGgK~~~~~~~a~~aAlaA~~~grPVkl~~tR~ed~~~~~~R~~~~~~~k~g~~~dG~i~a~~~~~~~d~G 812 (1276)
|+.+++|||||.|. ....+++.||++|+++||||||+|||+|+|+.+++||++.+++|+|+|+||+|+|++++++.|+|
T Consensus 92 V~~~~~GGgFG~~~-~~~~~~~~aa~~a~~~grPVk~~~tR~e~~~~~~~r~~~~~~~~~g~~~dG~i~a~~~~~~~d~G 170 (547)
T PF02738_consen 92 VISPYVGGGFGKKK-QDSPIAVLAALAAKKTGRPVKLVWTREEDFRAGPKRPPTRIRVRAGADKDGKITALDHDIYADGG 170 (547)
T ss_dssp EEESB-S--TTTTS-STHHHHHHHHHHHHHHSSEEEEE--HHHHHHHS-BB-EEEEEEEEEE-TTS-EEEEEEEEEEEEE
T ss_pred EeeeecCCCCCCcc-ccchHHHHHHHHHhccCceEEEEechHHhcCCCCCccHHHhhhhheECCCCCEEEeeeeeeccCC
Confidence 99999999999333 34677899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCchHHHHHHHhhccCCCcccCeEEEEEEEEecCCCCCCcccCCChhhhHhHHHHHHHHHHHHcCCCHHHHHHHhcCC
Q 000805 813 NSLDLSLAVLERAMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITENWIQRVAVEVRKSPEEIREINFQG 892 (1276)
Q Consensus 813 a~~~~~~~v~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~~a~Rg~G~~q~~fa~E~~md~lA~~lg~DP~e~R~~Nl~~ 892 (1276)
+|.+++..+....+....++|+|||++++++.|+||++|.++|||||.+|+.|++|++||++|++|||||+|||++|+.+
T Consensus 171 a~~~~~~~~~~~~~~~~~~~Y~ipn~~~~~~~v~Tn~~~~g~~Rg~G~~q~~fa~E~~~DelA~~lg~DP~e~R~~N~~~ 250 (547)
T PF02738_consen 171 AYASFSPAVAPRAGAGADGPYRIPNVRIDARAVYTNTPPAGAFRGFGAPQAAFALESFMDELAEKLGMDPLEFRLKNLID 250 (547)
T ss_dssp SS-TTHHHHHHHHHHTTTTTB--SEEEEEEEEEE-SSSSBE-STTTTHHHHHHHHHHHHHHHHHHHTS-HHHHHHHHB-G
T ss_pred ccccccccchhhhhcccCCCcccccEEEEEEeccCCCCCCCcCCCCCHHHHHHHHHHHHHHHHHHhCcChHHHHHhcccc
Confidence 99999888888888888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCccccCCCHHH-HHHHHHHhCCChhhHHhHhhhhccCCccccceEEEeeeeccccccccCCceeEEEEEecCC
Q 000805 893 EGSILHYGQQLQHCTLFP-LWNELKLSCDFLNARKEVDNFNLNNRWKKRGIAMVPTKFGISFTLKLMNQAGALVHVYTDG 971 (1276)
Q Consensus 893 ~g~~~~~g~~~~~~~l~~-~l~~~~~~~~~~~r~~~~~~fn~~~~~~~rGia~~~~~~g~~~~~~~~~~~~a~V~l~~DG 971 (1276)
+++.+++|..++++.+.+ ||+++++.++|.++.++.+.|+..+.|++||+++++..++.++.....+.+++.|+|++||
T Consensus 251 ~~~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gig~~~~~~~~~~~~~~~~~~~a~v~l~~DG 330 (547)
T PF02738_consen 251 PGDRTPTGQPYDSGDYPEDCLEKAAEHSGWRRRQKEVREFGSGNGWRGRGIGLGCAMYGSGTGGGSGDQSSARVRLNPDG 330 (547)
T ss_dssp TTEB-TTS-BETS--HHHHHHHHHHHHHCHHHHHHHHHHCCHEESSEEEEEEEEEEEEEESTTSGGGSEEEEEEEE-TTS
T ss_pred cccccccCcccccCcHHHHHHHHHHhhhchhhhhhHHhhccccccccccccCCCccccccccccccccCCcEEEEEEeCC
Confidence 999999999999999998 9999999999999998888888888999999999998888877655456789999999999
Q ss_pred eEEEEEcCccCCcchHHHHHHHHHHHhCCCcccEEEecCCCCCCCCCCCCccchhhhHHHHHHHHHHHHHHHHHHHhhhc
Q 000805 972 TVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETSTDKVPNASPTAASASSDIYGAAVLDACEQIKARMEPIASK 1051 (1276)
Q Consensus 972 sV~V~~g~~e~GqG~~T~~~qiaAe~Lgip~~~V~v~~~dT~~~p~~~~t~~Sr~t~~~g~Av~~Ac~~l~~rl~~~~~~ 1051 (1276)
+|+|.+|.+|||||++|+++||+||+||||+++|+|..+||+.+|++++|+|||++++.|.|+++||++||++|.+.+..
T Consensus 331 ~v~v~~~~~e~GqG~~T~~~qiaAe~Lgi~~~~V~v~~~dT~~~p~~~~t~gSr~t~~~g~Av~~Aa~~lr~~l~~~Aa~ 410 (547)
T PF02738_consen 331 SVTVYTGGVEMGQGSRTALAQIAAEELGIPPEDVRVVSGDTDTTPYDGGTGGSRSTYMSGNAVRKAAEDLREKLLEIAAE 410 (547)
T ss_dssp -EEEEES--BSSSSHHHHHHHHHHHHHTS-GGGEEEEECBTTTS-SB--S-TTTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEecccCCcchhhhHHHHHHHHhCCChhhEEEEeCCCcCCCCCCCCccchhhHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998876
Q ss_pred C-----CCCCHHHH--HHHhhccCcceeEEEEeecCCccccccC-CCCCCcccccEEEEEEEEEeeCCCCcEEEeEEEEE
Q 000805 1052 H-----NFNSFAEL--ASACYVQRIDLSAHGFYITPEIDFDWIT-GKGNPFRYFTYGAAFAEVEIDTLTGDFHTRMANVI 1123 (1276)
Q Consensus 1052 ~-----~~~~~~~~--~~~a~~~~~~l~~~~~~~~~~~~~~~~~-~~g~~~~~~~~ga~~~eVEVD~~TG~v~V~r~~~v 1123 (1276)
. .++.|++- ........+.+.+...+..+...++... ..+..+.+++||++++|||||++||+++|+|++++
T Consensus 411 ~~~~~~~~l~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~eVeVD~~TG~v~v~~~~~~ 490 (547)
T PF02738_consen 411 ILGVDPEDLELEDGRVISPAKGVSISEAAIAAYANPPTGFDPGTGGYGPPASYYSFGAHFAEVEVDTETGEVRVLRVVAA 490 (547)
T ss_dssp HTTSSGGGEECHCHETHHHHHHEEHHHEEEHHHCTTSTTCETTTTEESBSSSEEEEEEEEEEEEEETTTSEEEEEEEEEE
T ss_pred hcccccchhhhhhhccccccccccccccccccccccccccccccccccCCccceeeeeeecccccccccccccceeeeee
Confidence 2 23455554 3344444444444443333322222222 14567788999999999999999999999999999
Q ss_pred EecCcccChhhhhhhhhhHHHHHHHHHhcceEEecCCCCccCCCCccccCCCCCCCCCCCCCCC
Q 000805 1124 LDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPGCLYTCGPGSYKIPSLNDVP 1187 (1276)
Q Consensus 1124 ~D~G~~iNP~~~~gQieGg~~qGlG~al~Ee~~~d~~~~~~~~~G~~~t~~~~~Y~iP~~~diP 1187 (1276)
+|||++|||++++||||||++||||++|+|++.|| ++|+++|.||++|++|++.|+|
T Consensus 491 ~D~G~~iNP~~v~gQi~Gg~~~Glg~al~E~~~~d-------~~G~~~~~~~~dY~ip~~~d~P 547 (547)
T PF02738_consen 491 HDCGRVINPDIVEGQIEGGIVQGLGYALYEELVYD-------ENGRPLNPNFADYKIPTAADVP 547 (547)
T ss_dssp EEEBS-SBHHHHHHHHHHHHHHHHHHHHT--BEBT-------TTSEBSTSSTTTST---GGGS-
T ss_pred ccCCcccCHHHHhhhccccHHHHHHHHhcCCeEEC-------CCCcCCCCChhhCcCCCccccC
Confidence 99999999999999999999999999999999998 6999999999999999999998
No 16
>COG4630 XdhA Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A [Nucleotide transport and metabolism]
Probab=100.00 E-value=2e-91 Score=759.69 Aligned_cols=398 Identities=31% Similarity=0.555 Sum_probs=356.1
Q ss_pred ccccccC---CCceecCCC-------CcHHHHHHHHcCCCCCCCCChHHHHHHHHHHHcCCCCCCHHHHHHHccCccccC
Q 000805 2 ACIQFNA---NKLLTSLDL-------RYVLQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLAGNLCRC 71 (1276)
Q Consensus 2 ~c~~~~~---~~~~~t~~~-------~~~~q~~~~~~~~~qCg~Ctpg~v~~~~~~l~~~~~~~~~~~i~~~~~gnlCrC 71 (1276)
+||.|+. |+||+|+|+ ||||||+|+++|||||||||||||||+|+|+.+++.| +.+.|+++|+||||||
T Consensus 74 ACirfl~sL~G~hvvTvE~L~~~~g~LHpVQqamvd~hGSQCGfCTPGFVmSLyal~~~~~~P-~~a~i~kALqGNLCRC 152 (493)
T COG4630 74 ACIRFLGSLDGTHVVTVEHLRGQDGTLHPVQQAMVDFHGSQCGFCTPGFVMSLYALWMNSPTP-SRAAIEKALQGNLCRC 152 (493)
T ss_pred HHHHHHhhcCCceEEEehhhcCCCCCcCHHHHHHHhccCCccCCcCchHHHHHHHHHhcCCCC-chhHHHHHhhCCcccc
Confidence 7999998 899999996 8999999999999999999999999999999999988 9999999999999999
Q ss_pred CCCHhHHHHHHHHHhccccccccccccCcCCCccccCCCCCCCCCCCCCCCCCCccccccccCCCccccccccCCCCcCC
Q 000805 72 TGYRPIVDAFRVFAKTNDALYTNMSSMSLKEGEFVCPSTGKPCSCGMKNVSNADTCEKSVACGKTYEPVSYSEIDGSTYT 151 (1276)
Q Consensus 72 tgy~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (1276)
|||+||++|....+..... +..| |..
T Consensus 153 TGY~pI~~AA~~~~a~~~~--------a~fD----------------------------------------------Pl~ 178 (493)
T COG4630 153 TGYRPIIRAAEAIAALGPA--------AGFD----------------------------------------------PLA 178 (493)
T ss_pred cCchHHHHHHHHHhccCCc--------ccCC----------------------------------------------hhh
Confidence 9999999999877654211 0000 000
Q ss_pred ccccCCchhhhhcC-CCCcccccCCCeEEEecCCHHHHHHHHhcCCCcEEEEccchhhHHHHhCcCCCCeEEeCCCCCCC
Q 000805 152 EKELIFPPELLLRK-SNPLNLSGFGGLKWYRPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPEL 230 (1276)
Q Consensus 152 ~~~~~~p~~l~~~~-~~~~~~~~~~~~~~~~P~sl~eal~ll~~~~~a~lvaGgTdl~v~~~~~~~~~~~lIdl~~i~EL 230 (1276)
-..-..-+.|.... ...+.+ +++...++.|.+|+++..++++||+++||||+||+++|+++.+.....+|.+++|+||
T Consensus 179 ~~R~~~~~~L~A~~~~e~v~~-~~~~~r~~~P~~l~D~a~l~aa~P~AtivAGsTDvgLwVtk~mr~l~~vi~v~~l~eL 257 (493)
T COG4630 179 ARRTAITARLRALRDTETVEV-GSGDDRFIVPATLADFADLLAAHPGATIVAGSTDVGLWVTKQMRDLNPVIFVGHLAEL 257 (493)
T ss_pred hhHHHHHHHHhhccCCcEEEe-cCCCceeEeeccHHHHHHHHhhCCCCEEEecCcchhhHHHHHHhhcCCeEEecchhhh
Confidence 00000012233222 234455 5556789999999999999999999999999999999999999888999999999999
Q ss_pred ccEEEcCCeEEEcccccHHHHHHHhhhhhhcCCccchhhHHHHHHHHHhhcCcccceeeeecccccccCCCCCHHHHHHH
Q 000805 231 NVLNVKDDGLEIGAAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPLWMA 310 (1276)
Q Consensus 231 ~~I~~~~~~l~IGA~vTl~~l~~~l~~~~~~~~~~~~~~~~~L~~~~~~ias~qIRN~aTiGGNi~~asp~sD~~p~Lla 310 (1276)
+.|++..++|+|||++||+|....|.. .+|.|.+.+.+|||.||||+|||||||+|+||++|.+|+|+|
T Consensus 258 ~~i~~~~~~l~iGAgvt~t~a~~~la~-----------~~P~l~~L~~r~gg~qvRN~gTlGGNIangSPIGDtPPaLIA 326 (493)
T COG4630 258 RRIEVSTGGLEIGAGVTYTQAYRALAG-----------RYPALGELWDRFGGEQVRNMGTLGGNIANGSPIGDTPPALIA 326 (493)
T ss_pred heeeecCCcEEEccCccHHHHHHHHHh-----------hCchHHHHHHHhcchhhhccccccccccCCCcCCCCCchhhh
Confidence 999999999999999999999987643 456789999999999999999999999999999999999999
Q ss_pred cCCEEEEEeCCCcEEEEEhHhHhccCccccCCCceEEEEEEccCCCCCccEEEEEEeccCcccccccceEEEEEEecCCc
Q 000805 311 SGAKFHIVDCKGNIRTTMAEEFFLGYRKVDLTSGEILLSIFLPWTRPFEFVKEFKQAHRRDDDIALVNAGMRVYLEEKDE 390 (1276)
Q Consensus 311 l~A~v~l~s~~g~~R~vpl~~F~~g~~~t~L~~~Eii~~I~iP~~~~~~~~~~~K~~~R~~~d~a~v~~A~~~~~~~~~~ 390 (1276)
|||+|+|++.++ .|++||++||.+|+|++++|||+|.+|+||.+.+...|.+||++||+..||+.|.+||.++++++
T Consensus 327 LgA~ltLr~g~~-~RtlPLe~~Fi~Y~kqdr~pGEfVe~v~vP~~~~~~rfa~yKisKRrdeDISAv~~Af~l~Ldg~-- 403 (493)
T COG4630 327 LGATLTLRSGDG-RRTLPLEDYFIAYGKQDRQPGEFVEAVRVPLPAPSERFAAYKISKRRDEDISAVCGAFALDLDGG-- 403 (493)
T ss_pred cCcEEEEEecCC-cccccHHHHHHHhhhhccCcchhhhheecCCCCcchhhhhhhhhhhccchHHHHHhHheeeecCC--
Confidence 999999999999 99999999999999999999999999999999888889999999999999999999999999854
Q ss_pred ceEEEEEEEEEecCCCcceeHHHHHHHhcCCCCCHHHHHHHHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 000805 391 EWVVSDALLVYGGVAPLSLSAKKTKTFIVGKSWSQELLQNALKILQTDIILKEDAPGGMVDFRKSLTLSFFFKFFLWVSH 470 (1276)
Q Consensus 391 ~~~i~~~ria~Ggv~~~p~ra~~~E~~L~Gk~~~~~~l~~a~~~l~~e~~~~~~~~~~s~~YR~~la~~l~~r~l~~~~~ 470 (1276)
+|.++||+||||+.+|+|+.++|++|.||+|++++++.|.+++..+++|..|. |+|++||..+++|+++|||+|..+
T Consensus 404 --~V~~arIa~GGmAaTPkRA~~~EaAL~Gk~wteatve~A~aAl~~D~tPltD~-RAsaeYR~l~a~nlL~RfflEt~~ 480 (493)
T COG4630 404 --RVADARIAFGGMAATPKRASEVEAALLGKPWTEATVEAAAAALAGDFTPLTDM-RASAEYRALTAKNLLRRFFLETQG 480 (493)
T ss_pred --eeeeeeeecCccccCccchHHHHHHHcCCCccHHHHHHHHHHHhcCCCcccch-hhhHHHHHHHHHHHHHHHhhhccC
Confidence 89999999999999999999999999999999999999999999999977775 899999999999999999999876
Q ss_pred hh
Q 000805 471 QM 472 (1276)
Q Consensus 471 ~~ 472 (1276)
..
T Consensus 481 ~~ 482 (493)
T COG4630 481 EA 482 (493)
T ss_pred Cc
Confidence 44
No 17
>TIGR02963 xanthine_xdhA xanthine dehydrogenase, small subunit. Members of this protein family are the small subunit (or, in eukaryotes, the N-terminal domain) of xanthine dehydrogenase, an enzyme of purine catabolism via urate. The small subunit contains both an FAD and a 2Fe-2S cofactor. Aldehyde oxidase (retinal oxidase) appears to have arisen as a neofunctionalization among xanthine dehydrogenases in eukaryotes and
Probab=100.00 E-value=9e-87 Score=797.17 Aligned_cols=389 Identities=35% Similarity=0.618 Sum_probs=350.7
Q ss_pred ccccccC---CCceecCCC-------CcHHHHHHHHcCCCCCCCCChHHHHHHHHHHHcCCCCCCHHHHHHHccCccccC
Q 000805 2 ACIQFNA---NKLLTSLDL-------RYVLQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLAGNLCRC 71 (1276)
Q Consensus 2 ~c~~~~~---~~~~~t~~~-------~~~~q~~~~~~~~~qCg~Ctpg~v~~~~~~l~~~~~~~~~~~i~~~~~gnlCrC 71 (1276)
||++|+. |++|+|+|+ +||||++|+++|++|||||||||||++++||++++.| +++||+++|+||||||
T Consensus 66 sCl~~~~~~~g~~i~TvEgl~~~~~~l~~~q~a~~~~~~~QCG~CtpG~vm~~~~ll~~~~~~-~~~~i~~~l~gnlCRC 144 (467)
T TIGR02963 66 ACIQFLPSLDGKAVVTVEDLRQPDGRLHPVQQAMVECHGSQCGFCTPGFVMSLYALYKNSPAP-SRADIEDALQGNLCRC 144 (467)
T ss_pred hhhhhHHhcCCCEEEecCCCCCCCCCCCHHHHHHHHcCCCcCCCCchHHHHHHHHHHhcCCCC-CHHHHHHHhcCCcccC
Confidence 8999999 899999997 5999999999999999999999999999999999999 9999999999999999
Q ss_pred CCCHhHHHHHHHHHhccccccccccccCcCCCccccCCCCCCCCCCCCCCCCCCccccccccCCCccccccccCCCCcCC
Q 000805 72 TGYRPIVDAFRVFAKTNDALYTNMSSMSLKEGEFVCPSTGKPCSCGMKNVSNADTCEKSVACGKTYEPVSYSEIDGSTYT 151 (1276)
Q Consensus 72 tgy~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (1276)
|||++|++|+. ++.+.. | +++|+
T Consensus 145 tgy~~i~~a~~-~~~~~~--------------------------~------------------------------~~~~~ 167 (467)
T TIGR02963 145 TGYRPILDAAE-AAFDYP--------------------------C------------------------------SDPLD 167 (467)
T ss_pred CCCHHHHHHHH-HHHhCC--------------------------C------------------------------CCcCC
Confidence 99999999995 443310 1 11233
Q ss_pred cc-ccCCchhhhhc-CCCCcccccCCCeEEEecCCHHHHHHHHhcCCCcEEEEccchhhHHHHhCcCCCCeEEeCCCCCC
Q 000805 152 EK-ELIFPPELLLR-KSNPLNLSGFGGLKWYRPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPE 229 (1276)
Q Consensus 152 ~~-~~~~p~~l~~~-~~~~~~~~~~~~~~~~~P~sl~eal~ll~~~~~a~lvaGgTdl~v~~~~~~~~~~~lIdl~~i~E 229 (1276)
+. +++| |+|... ...++.+ ..++.+||+|+||+||+++|+++|+++++|||||++++++++...++++|||++|+|
T Consensus 168 ~~~~~~~-~~l~~~~~~~~~~~-~~~~~~~~~P~sl~Ea~~ll~~~~~a~lvAGGTdl~~~~~~~~~~~~~lIdl~~I~E 245 (467)
T TIGR02963 168 ADRAPII-ERLRALRAGETVEL-NFGGERFIAPTTLDDLAALKAAHPDARIVAGSTDVGLWVTKQMRDLPDVIYVGQVAE 245 (467)
T ss_pred cchhhhh-hHHHhcCCCcceee-cCCCceEECCCCHHHHHHHHhhCCCCEEEecCcchHHHHhcCCCCCCeEEECCCChh
Confidence 33 4556 444432 2344555 334679999999999999999999999999999999999999999999999999999
Q ss_pred CccEEEcCCeEEEcccccHHHHHHHhhhhhhcCCccchhhHHHHHHHHHhhcCcccceeeeecccccccCCCCCHHHHHH
Q 000805 230 LNVLNVKDDGLEIGAAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPLWM 309 (1276)
Q Consensus 230 L~~I~~~~~~l~IGA~vTl~~l~~~l~~~~~~~~~~~~~~~~~L~~~~~~ias~qIRN~aTiGGNi~~asp~sD~~p~Ll 309 (1276)
|+.|+.++++|+|||+|||+|+.+.++. .+|.|.+++++|||+||||+|||||||++++|+||++|+|+
T Consensus 246 L~~I~~~~~~l~IGA~vT~~el~~~l~~-----------~~p~L~~a~~~ias~qIRN~aTiGGNI~~asP~sD~~p~Ll 314 (467)
T TIGR02963 246 LKRIEETDDGIEIGAAVTLTDAYAALAK-----------RYPELGELLRRFASLQIRNAGTLGGNIANGSPIGDSPPALI 314 (467)
T ss_pred hccEEEcCCEEEEecCCcHHHHHHHHHH-----------HhHHHHHHHHHhCCHHHcCceecccccccCCCchHHHHHHH
Confidence 9999999999999999999999865432 56789999999999999999999999999999999999999
Q ss_pred HcCCEEEEEeCCCcEEEEEhHhHhccCccccCCCceEEEEEEccCCCCCccEEEEEEeccCcccccccceEEEEEEecCC
Q 000805 310 ASGAKFHIVDCKGNIRTTMAEEFFLGYRKVDLTSGEILLSIFLPWTRPFEFVKEFKQAHRRDDDIALVNAGMRVYLEEKD 389 (1276)
Q Consensus 310 al~A~v~l~s~~g~~R~vpl~~F~~g~~~t~L~~~Eii~~I~iP~~~~~~~~~~~K~~~R~~~d~a~v~~A~~~~~~~~~ 389 (1276)
||||+|+|.+.+| +|+||++|||.||+++.|+++|||++|+||.++.+.++.+||+++|+++|||+||+|+.++++ ++
T Consensus 315 ALdA~v~l~~~~G-~R~vpl~dF~~g~~kt~L~~~EiI~~I~iP~~~~~~~~~~~K~~~R~~~dia~V~~A~~v~~~-~~ 392 (467)
T TIGR02963 315 ALGARLTLRKGEG-RRTLPLEDFFIDYGKTDRQPGEFVEALHVPRPTPGERFRAYKISKRFDDDISAVCAAFNLELD-GG 392 (467)
T ss_pred HcCCEEEEEcCCC-cEEEeHHHhhcccccccCCCCceEEEEEecCCCCCCceEEEEecccccccceeeEEEEEEEEc-CC
Confidence 9999999999999 999999999999999999999999999999776667788999999999999999999999997 45
Q ss_pred cceEEEEEEEEEecCCCcceeHHHHHHHhcCCCCCHHHHHHHHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q 000805 390 EEWVVSDALLVYGGVAPLSLSAKKTKTFIVGKSWSQELLQNALKILQTDIILKEDAPGGMVDFRKSLTLSFFFKFFLW 467 (1276)
Q Consensus 390 ~~~~i~~~ria~Ggv~~~p~ra~~~E~~L~Gk~~~~~~l~~a~~~l~~e~~~~~~~~~~s~~YR~~la~~l~~r~l~~ 467 (1276)
+|+++||+||||+++|+|+.++|++|.|++|+++++++|++++.+++.|.++ .++|++||++|+.+|++||+.+
T Consensus 393 ---~i~~~ria~Ggva~~p~r~~~~E~~L~G~~~~~~~l~~a~~~l~~~~~p~~d-~r~sa~YR~~la~~l~~r~~~~ 466 (467)
T TIGR02963 393 ---VVAEIRIAFGGMAATPKRAAATEAALLGKPWNEATVEAAMAALAGDFTPLSD-MRASAEYRLLTAKNLLRRFFLE 466 (467)
T ss_pred ---eEeEEEEEEecCCCCceehHHHHHHhcCCCCCHHHHHHHHHHHHhhCCCCCC-CCCCHHHHHHHHHHHHHHHHhh
Confidence 8999999999999999999999999999999999999999999999976655 4799999999999999999876
No 18
>PRK09971 xanthine dehydrogenase subunit XdhB; Provisional
Probab=100.00 E-value=4.5e-57 Score=513.97 Aligned_cols=280 Identities=25% Similarity=0.377 Sum_probs=262.3
Q ss_pred EEEecCCHHHHHHHHhcCCCcEEEEccchhhHHHHhCcCCCCeEEeCCCCCCCccEEEc-CCeEEEcccccHHHHHHHhh
Q 000805 178 KWYRPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVK-DDGLEIGAAVRLTELLKMFR 256 (1276)
Q Consensus 178 ~~~~P~sl~eal~ll~~~~~a~lvaGgTdl~v~~~~~~~~~~~lIdl~~i~EL~~I~~~-~~~l~IGA~vTl~~l~~~l~ 256 (1276)
+|++|+|++||+++|+++|+++++||||||+++++.+...|+++|||++|+||++|+.. +++|+|||+||+++++++
T Consensus 6 ~~~~P~sl~Ea~~ll~~~~~a~ivaGGTdl~~~~~~~~~~p~~lIdl~~i~eL~~I~~~~~~~l~IGA~vt~~~l~~~-- 83 (291)
T PRK09971 6 EYHEAATLEEAIELLADNPQAKLIAGGTDVLIQLHHHNDRYRHLVSIHNIAELRGITLAEDGSIRIGAATTFTQIIED-- 83 (291)
T ss_pred ceeCCCCHHHHHHHHHhCCCCEEEeccchHHHHHhCCCCCCCeEEEcCCChhhhCeEecCCCEEEEEeCCcHHHHhcC--
Confidence 89999999999999999999999999999999999999999999999999999999964 577999999999999986
Q ss_pred hhhhcCCccchhhHHHHHHHHHhhcCcccceeeeecccccccCCCCCHHHHHHHcCCEEEEEeCCCcEEEEEhHhHhccC
Q 000805 257 KVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPLWMASGAKFHIVDCKGNIRTTMAEEFFLGY 336 (1276)
Q Consensus 257 ~~~~~~~~~~~~~~~~L~~~~~~ias~qIRN~aTiGGNi~~asp~sD~~p~Llal~A~v~l~s~~g~~R~vpl~~F~~g~ 336 (1276)
+.+.. .+|.|.++++++|++||||+||||||||+++|.||++|+|+||||+|+|.+.+| +|+||++|||.|+
T Consensus 84 ~~i~~-------~~p~L~~a~~~ia~~qIRN~aTiGGNi~~a~p~sD~~~~Llal~A~v~i~~~~g-~R~vp~~df~~g~ 155 (291)
T PRK09971 84 PIIQK-------HLPALAEAAVSIGGPQIRNVATIGGNICNGATSADSAPPLFALDAKLEIHSPNG-VRFVPINGFYTGP 155 (291)
T ss_pred hHHHH-------HhHHHHHHHHHhCCHHHhcceecccccccCCcchhHHHHHHHcCCEEEEEcCCC-cEEEEHHHhcCCc
Confidence 55543 689999999999999999999999999999999999999999999999999999 9999999999999
Q ss_pred ccccCCCceEEEEEEccCCC-CCccEEEEEEeccCcccccccceEEEEEEecCCcceEEEEEEEEEecCCCcceeHHHHH
Q 000805 337 RKVDLTSGEILLSIFLPWTR-PFEFVKEFKQAHRRDDDIALVNAGMRVYLEEKDEEWVVSDALLVYGGVAPLSLSAKKTK 415 (1276)
Q Consensus 337 ~~t~L~~~Eii~~I~iP~~~-~~~~~~~~K~~~R~~~d~a~v~~A~~~~~~~~~~~~~i~~~ria~Ggv~~~p~ra~~~E 415 (1276)
+++.|+++|||++|+||.++ .+..+.+||+.+|+++|||+||+|+.++++ ++ +|+++||+|||++|+|+|+.++|
T Consensus 156 ~~t~l~~~Eil~~I~iP~~~~~~~~~~~~K~~~R~~~~~a~v~~a~~~~~~-~g---~i~~~ria~G~v~~~p~r~~~~E 231 (291)
T PRK09971 156 GKVSLEHDEILVAFIIPPEPYEHAGGAYIKYAMRDAMDIATIGCAVLCRLD-NG---NFEDLRLAFGVAAPTPIRCQHAE 231 (291)
T ss_pred cccccCCCceEEEEEeCCCCCCCCceEEEEEcccchhhHhHheeEEEEEEc-CC---EEEEEEEEEEcccCceeeHHHHH
Confidence 99999999999999999753 345667889999999999999999999986 45 89999999999999999999999
Q ss_pred HHhcCCCCCHHHHHHHHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhh
Q 000805 416 TFIVGKSWSQELLQNALKILQTDIILKEDAPGGMVDFRKSLTLSFFFKFFLWVSHQM 472 (1276)
Q Consensus 416 ~~L~Gk~~~~~~l~~a~~~l~~e~~~~~~~~~~s~~YR~~la~~l~~r~l~~~~~~~ 472 (1276)
++|.|+.|++++++++.+.+.+++.|.+| .++|++||++|+.+|++|++.++..+.
T Consensus 232 ~~L~G~~~~~~~~~~a~~~~~~~~~p~~d-~~~s~~YR~~l~~~l~~r~l~~~~~~~ 287 (291)
T PRK09971 232 QTAKGAPLNLETLEAIGELVLQDVAPRSS-WRASKEFRLHLIQELTKRVIKEAVAAA 287 (291)
T ss_pred HHhCCCCCCHHHHHHHHHHHHhcCCCCCC-CCcCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999987776 699999999999999999999987653
No 19
>TIGR03195 4hydrxCoA_B 4-hydroxybenzoyl-CoA reductase, beta subunit. This model represents the second largest chain, beta, of the enzyme 4-hydroxybenzoyl-CoA reductase. In species capable of degrading various aromatic compounds by way of benzoyl-CoA, this enzyme can convert 4-hydroxybenzoyl-CoA to benzoyl-CoA.
Probab=100.00 E-value=1.7e-53 Score=483.92 Aligned_cols=277 Identities=21% Similarity=0.274 Sum_probs=253.4
Q ss_pred CeEEEecCCHHHHHHHHhcCCCcEEEEccchhhHHHHhCcCCCCeEEeCCCCCCCccEEEcCCeEEEcccccHHHHHHHh
Q 000805 176 GLKWYRPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELLKMF 255 (1276)
Q Consensus 176 ~~~~~~P~sl~eal~ll~~~~~a~lvaGgTdl~v~~~~~~~~~~~lIdl~~i~EL~~I~~~~~~l~IGA~vTl~~l~~~l 255 (1276)
.++|++|+||+||+++|+++++++++||||||+++++.+...|+++|||++|+||++|+.++++|+|||+||+++|+++
T Consensus 4 ~f~~~~P~sl~eA~~ll~~~~~a~ivaGGTdl~~~~~~~~~~p~~lIdi~~I~eL~~I~~~~~~l~IGA~vT~~~l~~~- 82 (321)
T TIGR03195 4 DFRTLRPASLADAVAALAAHPAARPLAGGTDLLPNLRRGLGQPETLVDLTGIDEIAQLSTLADGLRIGAGVTLAALAED- 82 (321)
T ss_pred CceEECCCCHHHHHHHHhhCCCCEEEEccchHHHHHhcccCCCCeEEECCCChhhccEEecCCEEEEeccCcHHHHhhC-
Confidence 5799999999999999999999999999999999999998899999999999999999999999999999999999987
Q ss_pred hhhhhcCCccchhhHHHHHHHHHhhcCcccceeeeeccccc--------------------------------------c
Q 000805 256 RKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNIC--------------------------------------T 297 (1276)
Q Consensus 256 ~~~~~~~~~~~~~~~~~L~~~~~~ias~qIRN~aTiGGNi~--------------------------------------~ 297 (1276)
+.+.+ .+|.|.++++.+|++||||+|||||||| +
T Consensus 83 -~~i~~-------~~p~L~~a~~~ias~qIRN~aTiGGNi~~~~~c~~~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~c~ 154 (321)
T TIGR03195 83 -ALVRT-------RWPALAQAARAVAGPTHRAAATLGGNLCLDTRCIYYNQSEWWRSGNGYCLKYRGDKCHVAPKSDRCY 154 (321)
T ss_pred -hhhHh-------HhHHHHHHHHHhCCHHHhCceecHHhhhccCCCcccccccccccccccccccCCccccccCCCcccc
Confidence 55543 6899999999999999999999999999 5
Q ss_pred cCCCCCHHHHHHHcCCEEEEEeCCCcEEEEEhHhHhcc--CccccCCCceEEEEEEccCCCCCccEEEEEEeccCccccc
Q 000805 298 ASPISDLNPLWMASGAKFHIVDCKGNIRTTMAEEFFLG--YRKVDLTSGEILLSIFLPWTRPFEFVKEFKQAHRRDDDIA 375 (1276)
Q Consensus 298 asp~sD~~p~Llal~A~v~l~s~~g~~R~vpl~~F~~g--~~~t~L~~~Eii~~I~iP~~~~~~~~~~~K~~~R~~~d~a 375 (1276)
++|.||++|+|+||||+|+|.+.+| +|+||++|||.| ++++.|+++|||++|+||.+. +..+.|+|+.+|.+.||+
T Consensus 155 a~p~sD~~~~LlAldA~v~i~~~~g-~R~vpl~dF~~~~g~~~t~L~~~Eiit~I~iP~~~-~~~~~y~k~~~r~a~~~~ 232 (321)
T TIGR03195 155 AAFSGDVAPALLVLDAEAEIVGPAG-VRRVPLAELYVEDGAAHLTLEPGEVLAAVRVPPTG-GWTSAYSKVRVRGAIDFP 232 (321)
T ss_pred CCCchHHHHHHHHcCCEEEEEeCCc-cEEEEHHHHhcccCCccccCCCCCeEEEEEecCCC-CCccEEEEEecCccccce
Confidence 7789999999999999999999999 999999999995 457999999999999999753 344556677778899999
Q ss_pred ccceEEEEEEecCCcceEEEEEEEEEecCCCcceeHHHHHHHhcCCCCCHHHHHHHHHHhhccCCCCCCCCCCCHHHHHH
Q 000805 376 LVNAGMRVYLEEKDEEWVVSDALLVYGGVAPLSLSAKKTKTFIVGKSWSQELLQNALKILQTDIILKEDAPGGMVDFRKS 455 (1276)
Q Consensus 376 ~v~~A~~~~~~~~~~~~~i~~~ria~Ggv~~~p~ra~~~E~~L~Gk~~~~~~l~~a~~~l~~e~~~~~~~~~~s~~YR~~ 455 (1276)
++++|+.++.+ ++ +|+++||++||++++|+|++++ ++|.|+.|++++++++.+++.+++.|.++ .++|++|||+
T Consensus 233 ~~~vav~l~~~-~~---~i~~~ria~Ggva~~p~r~~~~-e~l~G~~~~~~~~~~a~~~~~~~~~p~~d-~~~s~~YRr~ 306 (321)
T TIGR03195 233 LAGVAVALQRD-GD---RIAGLRVALTGTNSRPLMVPGT-DALAGRPLDDAAAEEIARLVRKTSQPMRT-TLMGVKYRRR 306 (321)
T ss_pred eEEEEEEEEeC-CC---eEEEEEEEEECccCceeehHHH-HHhcCCCCCHHHHHHHHHHHHhhCCCccC-CCCCHHHHHH
Confidence 99999998886 45 8999999999999999999999 55899999999999999999999987766 4799999999
Q ss_pred HHHHHHHHHHHHHH
Q 000805 456 LTLSFFFKFFLWVS 469 (1276)
Q Consensus 456 la~~l~~r~l~~~~ 469 (1276)
|+.+|++|++.++.
T Consensus 307 l~~~l~~r~~~~~~ 320 (321)
T TIGR03195 307 VLLAIARRLVDQLW 320 (321)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999998764
No 20
>TIGR03199 pucC xanthine dehydrogenase C subunit. This gene has been characterized in B. subtilis as the FAD binding-subunit of xanthine dehydrogenase (pucC), acting in conjunction with pucD, the molybdopterin-binding subunit and pucE, the FeS-binding subunit.
Probab=100.00 E-value=4.1e-52 Score=467.66 Aligned_cols=261 Identities=22% Similarity=0.338 Sum_probs=241.6
Q ss_pred cCCHHHHHHHHhcCCCcEEEEccchhhHHHHhC-cCCCCeEEeCCCCCCCccEEEcCCeEEEcccccHHHHHHHhhhhhh
Q 000805 182 PLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLK-RMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELLKMFRKVVT 260 (1276)
Q Consensus 182 P~sl~eal~ll~~~~~a~lvaGgTdl~v~~~~~-~~~~~~lIdl~~i~EL~~I~~~~~~l~IGA~vTl~~l~~~l~~~~~ 260 (1276)
|+||+||+++|+++|+++++|||||++++++.+ ...|+++|||++|+||++|+.++++|+|||+|||++|+++ +.+.
T Consensus 1 P~sl~ea~~ll~~~~~a~ivaGgT~l~~~~~~~~~~~~~~lIdi~~i~eL~~I~~~~~~l~IGA~vt~~~l~~~--~~i~ 78 (264)
T TIGR03199 1 PAALDEAWSLLEKAPDSTFVSGSTLLQLQWEKGTLPMKQHLVSLEGIDELKGISTSDTHVSIGALTTLNECRKN--PLIK 78 (264)
T ss_pred CCCHHHHHHHHHhCCCCEEEEccChHHHHHhcCcCCCCCeEEEcCCChhhCcEEecCCEEEEecCCcHHHHhhC--hHhH
Confidence 899999999999999999999999999999877 4668999999999999999999999999999999999975 4443
Q ss_pred cCCccchhhHHHHHHHHHhhcCcccceeeeecccccccCCCCCHHHHHHHcCCEEEEEeCCCcEEEEEhHhHhccCcccc
Q 000805 261 ERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPLWMASGAKFHIVDCKGNIRTTMAEEFFLGYRKVD 340 (1276)
Q Consensus 261 ~~~~~~~~~~~~L~~~~~~ias~qIRN~aTiGGNi~~asp~sD~~p~Llal~A~v~l~s~~g~~R~vpl~~F~~g~~~t~ 340 (1276)
+.+|.|.++++.+||+||||+||||||||++ .||++|+|+||||+|+|.+ +| +|+||++|||++ ++
T Consensus 79 -------~~~p~L~~a~~~ia~~qIRN~aTlGGNl~~~--~sD~~p~Llal~A~v~i~~-~g-~r~vp~~~f~~~---~~ 144 (264)
T TIGR03199 79 -------RALPCFVDAASAIAAPGVRNRATIGGNIASG--IGDFIPALLVLGAELIVYQ-KE-LIRLPLGAWLSE---ED 144 (264)
T ss_pred -------hHhHHHHHHHHHhcCHHHhcceecHHhccCc--ccchHHHHHHcCCEEEEEe-CC-EEEEEHHHhhhc---cC
Confidence 3789999999999999999999999999999 7999999999999999999 88 999999999984 68
Q ss_pred CCCceEEEEEEc-cCCCCCccEEEEEEeccCcccccccceEEEEEEecCCcceEEEEEEEEEecCCCcceeHHHHHHHhc
Q 000805 341 LTSGEILLSIFL-PWTRPFEFVKEFKQAHRRDDDIALVNAGMRVYLEEKDEEWVVSDALLVYGGVAPLSLSAKKTKTFIV 419 (1276)
Q Consensus 341 L~~~Eii~~I~i-P~~~~~~~~~~~K~~~R~~~d~a~v~~A~~~~~~~~~~~~~i~~~ria~Ggv~~~p~ra~~~E~~L~ 419 (1276)
|.++|||++|+| |.+..+.++.+||+.+|+++++++||+|+.+++++++ +|+++||+|||++++|+|+.++|++|.
T Consensus 145 l~~~Eii~~I~i~p~~~~~~~~~~~k~~~R~~~~~a~v~~a~~~~~~~~~---~i~~~ria~Ggv~~~p~r~~~~E~~L~ 221 (264)
T TIGR03199 145 FKPTAIVTRVIIGPRAETGEFVFYHKVGRRETFTGSLVVVAGRFLLDGSQ---TIKEIRLAVGGADITPRRLLDSEAKLM 221 (264)
T ss_pred CCCCcEEEEEEEECCCCCCCcEEEEEEeccchhHHHHheeeEEEEEcCCC---eEEEEEEEeecCCCceeeHHHHHHHhc
Confidence 999999999999 6655556778889999999999999999999997656 899999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHhhccCCCCCCCCCCCHHHHHHHHHHHHH
Q 000805 420 GKSWSQELLQNALKILQTDIILKEDAPGGMVDFRKSLTLSFFF 462 (1276)
Q Consensus 420 Gk~~~~~~l~~a~~~l~~e~~~~~~~~~~s~~YR~~la~~l~~ 462 (1276)
|++|++++++++.+.+.+++.|.++ +++|++||++|+++|+.
T Consensus 222 G~~~~~~~~~~a~~~~~~~~~p~~d-~~~s~~YR~~l~~~~~~ 263 (264)
T TIGR03199 222 APPWDPHLLAELYKTIIQELPFSSD-PFATAAYRKKVAANVIV 263 (264)
T ss_pred CCCCCHHHHHHHHHHHHhhCCCCCC-CCCCHHHHHHHHHHHhc
Confidence 9999999999999999999987664 69999999999999874
No 21
>COG1319 CoxM Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs [Energy production and conversion]
Probab=100.00 E-value=7.2e-51 Score=450.76 Aligned_cols=278 Identities=29% Similarity=0.420 Sum_probs=254.7
Q ss_pred CeEEEecCCHHHHHHHHhcCCCcEEEEccchhhHHHHhCcCCCCeEEeCCCCCCCccEEEcCCe-EEEcccccHHHHHHH
Q 000805 176 GLKWYRPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDG-LEIGAAVRLTELLKM 254 (1276)
Q Consensus 176 ~~~~~~P~sl~eal~ll~~~~~a~lvaGgTdl~v~~~~~~~~~~~lIdl~~i~EL~~I~~~~~~-l~IGA~vTl~~l~~~ 254 (1276)
.++|++|+|++||+.+|++.++++++||||+|...||.+...|.++|||++|+|++.+...+++ |+|||+||+++|..+
T Consensus 3 ~f~y~rp~Sv~eA~~ll~~~~~a~~laGGt~L~~~~k~~~~~p~~lVdI~~l~~~~~~~~~~g~~l~IGA~vt~~ei~~~ 82 (284)
T COG1319 3 NFEYYRPASVEEALNLLARAPDAKYLAGGTDLLPLMKLGIERPDHLVDINGLDELLGIVTTEGGSLRIGALVTLTEIARH 82 (284)
T ss_pred ceEEECCCCHHHHHHHHHhCCCcEEeeCcchHHHHhhcccCCcceEEEecCChhhhceEeecCCEEEEeecccHHHHHhC
Confidence 4799999999999999999899999999999999999999999999999999988888776555 999999999999988
Q ss_pred hhhhhhcCCccchhhHHHHHHHHHhhcCcccceeeeecccccccCCCCCHHHHHHHcCCEEEEEeCCCcEEEEEhHhHhc
Q 000805 255 FRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPLWMASGAKFHIVDCKGNIRTTMAEEFFL 334 (1276)
Q Consensus 255 l~~~~~~~~~~~~~~~~~L~~~~~~ias~qIRN~aTiGGNi~~asp~sD~~p~Llal~A~v~l~s~~g~~R~vpl~~F~~ 334 (1276)
+.++. .+|.|.+++..+||+||||+||||||||+++|.+|++|+|+||||+|++.+..| +|++|+++||.
T Consensus 83 --~~~~~-------~~p~L~ea~~~ia~~qvRN~aTiGGn~c~a~p~aD~~~aLlaLdA~v~~~~~~g-~r~i~~~~f~~ 152 (284)
T COG1319 83 --PAVRR-------IPPALSEAASAIASPQVRNRATIGGNLCNADPAADLAPALLALDAEVEIRSPGG-ERTIPIEDFFR 152 (284)
T ss_pred --hhhhh-------hchHHHHHHHHhcChhhcceeeecchhccCCCchhhHHHHHHcCCEEEEecCCc-cEEEEHHHhhc
Confidence 55554 678999999999999999999999999999999999999999999999999999 99999999999
Q ss_pred cCccccCCCceEEEEEEccCCCCCccEEEEEE-eccCcccccccceEEEEEEecCCcceEEEEEEEEEecCCCcceeHHH
Q 000805 335 GYRKVDLTSGEILLSIFLPWTRPFEFVKEFKQ-AHRRDDDIALVNAGMRVYLEEKDEEWVVSDALLVYGGVAPLSLSAKK 413 (1276)
Q Consensus 335 g~~~t~L~~~Eii~~I~iP~~~~~~~~~~~K~-~~R~~~d~a~v~~A~~~~~~~~~~~~~i~~~ria~Ggv~~~p~ra~~ 413 (1276)
|+..|.|++|||||+|+||.++ .....+||+ .+|...+++.|++|..++.+ +|+++||++||++++|+|+.+
T Consensus 153 ~p~~t~l~~gelit~v~lP~~~-~~~~~~~kk~r~r~~~~~~~vsvA~~~~~~------~v~~~RvAlgg~a~~p~R~~~ 225 (284)
T COG1319 153 GPGETALEPGELITAVILPPPP-AARGAYYKKVRRRASFAIALVSVAAKLRGD------RVSEARVALGGVAPKPWRLED 225 (284)
T ss_pred CccccccCCCcEEEEEEcCCCc-cCCccEEEEeecchhhhHHHHHHHhhhccc------ceeeeeeeecccCCcceehHH
Confidence 9999999999999999999983 333455655 55678899999999877643 589999999999999999999
Q ss_pred HHHHhcCCCCCHHHHHHHHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Q 000805 414 TKTFIVGKSWSQELLQNALKILQTDIILKEDAPGGMVDFRKSLTLSFFFKFFLWVSHQ 471 (1276)
Q Consensus 414 ~E~~L~Gk~~~~~~l~~a~~~l~~e~~~~~~~~~~s~~YR~~la~~l~~r~l~~~~~~ 471 (1276)
+|+.|.|+++++++++++.+...+++.|.+| +++|++||++|+++++.|.+.++..+
T Consensus 226 ~E~~L~~~~l~~~~~~~~~~~~~~~~~p~~d-~r~s~~yr~~l~~~~~~ral~~a~~~ 282 (284)
T COG1319 226 AEAALLGKPLSLETLEAAAEAAMQEAAPISD-VRGSAEYRRKLAKVLLARALAEAQGR 282 (284)
T ss_pred HHHHhhCCCCChHHHHHHHHHhhcccCCccc-ccchHHHHHHHHHHHHHHHHHHhhhc
Confidence 9999999999999999999999999987774 79999999999999999999988764
No 22
>PRK09799 putative oxidoreductase; Provisional
Probab=100.00 E-value=8.6e-48 Score=429.35 Aligned_cols=250 Identities=20% Similarity=0.338 Sum_probs=221.4
Q ss_pred EEEecCCHHHHHHHHhcCC-CcEEEEccchhhHHHHhCcCCCCeEEeCCCCCCCccEEEcCCeEEEcccccHHHHHHHhh
Q 000805 178 KWYRPLKLQHLLELKSKYP-DSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELLKMFR 256 (1276)
Q Consensus 178 ~~~~P~sl~eal~ll~~~~-~a~lvaGgTdl~v~~~~~~~~~~~lIdl~~i~EL~~I~~~~~~l~IGA~vTl~~l~~~l~ 256 (1276)
+|++|+||+||+++|++++ +++++||||||++.+ +...|+++|||++| ||++|+.++++|+|||+|||+++.++.
T Consensus 4 ~y~~P~sl~Ea~~ll~~~~~~a~ilAGGT~L~~~~--~~~~~~~lIdi~~i-eL~~I~~~~~~l~IGA~vT~~~l~~~~- 79 (258)
T PRK09799 4 QFFRPDSVEQALELKRRYQDEAVWFAGGSKLNATP--TRTDKKIAISLQDL-ELDWIEWDNGALRIGAMSRLQPLRDAR- 79 (258)
T ss_pred cEeCCCCHHHHHHHHHhCCCCCEEEecCCChHhhh--CCCCCCEEEEcCCC-CCCeEEecCCEEEEccCCcHHHHHhCc-
Confidence 7999999999999999995 699999999998864 45567899999999 999999999999999999999998862
Q ss_pred hhhhcCCccchhhHHHHHHHHHhhcCcccceeeeecccccccCCCCCHHHHHHHcCCEEEEEeCCCcEEEEEhHhHhccC
Q 000805 257 KVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPLWMASGAKFHIVDCKGNIRTTMAEEFFLGY 336 (1276)
Q Consensus 257 ~~~~~~~~~~~~~~~~L~~~~~~ias~qIRN~aTiGGNi~~asp~sD~~p~Llal~A~v~l~s~~g~~R~vpl~~F~~g~ 336 (1276)
.++ +.|.++++.+||+||||+||||||||+++|.||++|+|+||||+|+|.+. |++|++|||.|+
T Consensus 80 -~~~----------~~L~~a~~~vas~qIRN~aTiGGNl~~a~p~sD~~p~LlAldA~v~l~~~----r~vpl~~f~~g~ 144 (258)
T PRK09799 80 -FIP----------AALREALGFVYSRHLRNQSTIGGEIAARQEESVLLPVLLALDAELVFGNG----ETLSIEDYLACP 144 (258)
T ss_pred -ccH----------HHHHHHHHHhCCHHHhccchhHHHhhcCCccHHHHHHHHHcCCEEEEecC----cEEeHHHhcCCC
Confidence 221 27999999999999999999999999999999999999999999999873 789999999973
Q ss_pred ccccCCCceEEEEEEccCCCCCccEEEEEEeccCcccccccceEEEEEEecCCcceEEEEEEEEEecCCCcceeHHHHHH
Q 000805 337 RKVDLTSGEILLSIFLPWTRPFEFVKEFKQAHRRDDDIALVNAGMRVYLEEKDEEWVVSDALLVYGGVAPLSLSAKKTKT 416 (1276)
Q Consensus 337 ~~t~L~~~Eii~~I~iP~~~~~~~~~~~K~~~R~~~d~a~v~~A~~~~~~~~~~~~~i~~~ria~Ggv~~~p~ra~~~E~ 416 (1276)
++|||++|+||.+. ..+.+||+. |+.+|+|+||+|+.++++ + .+||+|||++++|+|++++|+
T Consensus 145 ------~~Eil~~I~iP~~~--~~~~~~K~~-r~~~~~a~v~~A~~~~~~-~-------~~ria~Ggv~~~p~r~~~~E~ 207 (258)
T PRK09799 145 ------CDRLLTEIIIPDPY--RTCATRKIS-RSQAGLTVVTAAVALTDH-D-------GMRIALDGVASKPLRLHDVEK 207 (258)
T ss_pred ------CCcEEEEEEcCCCC--CcceEEEec-ccccChhhheeEEEEEEc-C-------CeEEEEECCCCcccchHHHhc
Confidence 79999999999754 345677885 889999999999998875 2 389999999999999999998
Q ss_pred HhcCCCCCHHHHHHHHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Q 000805 417 FIVGKSWSQELLQNALKILQTDIILKEDAPGGMVDFRKSLTLSFFFKFFLWVSHQ 471 (1276)
Q Consensus 417 ~L~Gk~~~~~~l~~a~~~l~~e~~~~~~~~~~s~~YR~~la~~l~~r~l~~~~~~ 471 (1276)
++++++++.++ +.+++.|.+| .++|++||++++++|+.|+|.++.+.
T Consensus 208 ----~~~~~~~~~~a---~~~~~~p~~d-~~~s~~YR~~~~~~l~~r~l~~~~~~ 254 (258)
T PRK09799 208 ----QNLEGNALEQA---VANAIFPQED-LRGSVAYKRYIAGVLVADLYADCQQA 254 (258)
T ss_pred ----CCCCHHHHHHH---HHhcCCCCcc-CCcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 78999988876 4477776665 49999999999999999999998764
No 23
>TIGR03312 Se_sel_red_FAD probable selenate reductase, FAD-binding subunit. This protein is suggested by Bebien, et al., to be the FAD-binding subunit of a molydbopterin-containing selenate reductase. Our comparative genomics suggests it to be a subunit of a selenium-dependent molybdenum hydroxylase for an unknown substrate.
Probab=100.00 E-value=1.6e-47 Score=426.54 Aligned_cols=251 Identities=20% Similarity=0.319 Sum_probs=219.9
Q ss_pred EEEecCCHHHHHHHHhcCC-CcEEEEccchhhHHHHhCcCCCCeEEeCCCCCCCccEEEcCCeEEEcccccHHHHHHHhh
Q 000805 178 KWYRPLKLQHLLELKSKYP-DSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELLKMFR 256 (1276)
Q Consensus 178 ~~~~P~sl~eal~ll~~~~-~a~lvaGgTdl~v~~~~~~~~~~~lIdl~~i~EL~~I~~~~~~l~IGA~vTl~~l~~~l~ 256 (1276)
+|++|+|++||+++|++++ +++++||||||++.++ ...++++|||++| ||++|+.++++|+|||+||+++|+++
T Consensus 3 ~y~~P~sl~Ea~~ll~~~~~~a~~lAGGTdL~~~~~--~~~~~~lIdl~~i-eL~~I~~~~~~l~IGA~~t~~~l~~~-- 77 (257)
T TIGR03312 3 QFFRPESTIQALELKKRHTGVAVWFAGGSKLNATPT--RTDKKVAISLDKL-ALDKIELQGGALHIGAMCHLQSLIDN-- 77 (257)
T ss_pred ceECCCCHHHHHHHHHhCCCCCEEEecCcchhhhhc--ccCCCEEEEcCCC-CCCcEEecCCEEEEEeCCcHHHHHhC--
Confidence 7999999999999999985 6999999999987654 3456899999999 99999999999999999999999886
Q ss_pred hhhhcCCccchhhHHHHHHHHHhhcCcccceeeeecccccccCCCCCHHHHHHHcCCEEEEEeCCCcEEEEEhHhHhccC
Q 000805 257 KVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPLWMASGAKFHIVDCKGNIRTTMAEEFFLGY 336 (1276)
Q Consensus 257 ~~~~~~~~~~~~~~~~L~~~~~~ias~qIRN~aTiGGNi~~asp~sD~~p~Llal~A~v~l~s~~g~~R~vpl~~F~~g~ 336 (1276)
+.++ +.|.++++.+|++||||+||||||||+++|.||++|+|+||||+|+|.+. |+||++|||.|+
T Consensus 78 ~~~~----------~~L~~aa~~va~~qIRN~gTlGGNl~~a~p~~D~~~~LlaldA~v~l~~~----r~vp~~dF~~g~ 143 (257)
T TIGR03312 78 ELTP----------AALKEALGFVYSRHIRNQATIGGEIAAFQSESLLLPVLLALKATVVLANA----SQMDIEDYLASE 143 (257)
T ss_pred cchH----------HHHHHHHHHhCCHHHhccccHHHHhhcCCCchHHHHHHHHcCCEEEEecC----cEEeHHHhcCCC
Confidence 2222 26999999999999999999999999999999999999999999999864 789999999984
Q ss_pred ccccCCCceEEEEEEccCCCCCccEEEEEEeccCcccccccceEEEEEEecCCcceEEEEEEEEEecCCCcceeHHHHHH
Q 000805 337 RKVDLTSGEILLSIFLPWTRPFEFVKEFKQAHRRDDDIALVNAGMRVYLEEKDEEWVVSDALLVYGGVAPLSLSAKKTKT 416 (1276)
Q Consensus 337 ~~t~L~~~Eii~~I~iP~~~~~~~~~~~K~~~R~~~d~a~v~~A~~~~~~~~~~~~~i~~~ria~Ggv~~~p~ra~~~E~ 416 (1276)
++|||++|+||.+. ..+.++|+ .|+..|||+|++|+.++++ + ++||++||++++|+|+.++|+
T Consensus 144 ------~~Ell~~V~iP~~~--~~~~~~k~-~R~~~~~a~v~~A~~~~~~-~-------~~ria~ggv~~~p~r~~~~E~ 206 (257)
T TIGR03312 144 ------QRELIVEVIIPNPN--LMCATRNI-SRSAAGLAVVTAAVAVDQK-G-------NMRIALDGVSPVPVRLRDVEA 206 (257)
T ss_pred ------CCcEEEEEEcCCCC--CCceEEEe-cCcccchhhheeEEEEEec-C-------CEEEEEEccCCceeehHHHhh
Confidence 69999999999764 34566788 7999999999999998875 2 389999999999999999998
Q ss_pred HhcCCCCCHHHHHHHHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhh
Q 000805 417 FIVGKSWSQELLQNALKILQTDIILKEDAPGGMVDFRKSLTLSFFFKFFLWVSHQM 472 (1276)
Q Consensus 417 ~L~Gk~~~~~~l~~a~~~l~~e~~~~~~~~~~s~~YR~~la~~l~~r~l~~~~~~~ 472 (1276)
. .++++.++++ +.+++.|.+| .++|++|||+|+++|++|++.++.+-.
T Consensus 207 ~----~~~~~~~~~~---~~~~~~p~~D-~r~sa~YRr~~~~~l~~r~l~~~~~~~ 254 (257)
T TIGR03312 207 Q----DLKGEALEQA---VADAIHPVAD-LCGSVAYKRYIAGVVVADLLAECQQLA 254 (257)
T ss_pred C----cCCHHHHHHH---HHhcCCCCCC-CcCCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5 5777877654 5577776655 699999999999999999999987643
No 24
>PF00941 FAD_binding_5: FAD binding domain in molybdopterin dehydrogenase; InterPro: IPR002346 Oxidoreductases, that also bind molybdopterin, have essentially no similarity outside this common domain. They include aldehyde oxidase (1.2.3.1 from EC), that converts an aldehyde and water to an acid and hydrogen peroxide, and xanthine dehydrogenase (1.1.1.204 from EC), that converts xanthine to urate. These enzymes require molybdopterin and FAD as cofactors and have and two 2FE-2S clusters. Another enzyme that contains this domain is the Pseudomonas thermocarboxydovorans carbon monoxide oxygenase.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2E1Q_C 2CKJ_A 3EUB_K 3NS1_K 3NVV_B 1FO4_B 3AM9_A 3AX7_B 3BDJ_A 3ETR_B ....
Probab=100.00 E-value=2.7e-40 Score=347.82 Aligned_cols=170 Identities=40% Similarity=0.666 Sum_probs=151.4
Q ss_pred CeEEEecCCHHHHHHHHhcCCCcEEEEccchhhHHHHhCcCCCCeEEeCCCCCCCccEEEcCCeEEEcccccHHHHHHHh
Q 000805 176 GLKWYRPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELLKMF 255 (1276)
Q Consensus 176 ~~~~~~P~sl~eal~ll~~~~~a~lvaGgTdl~v~~~~~~~~~~~lIdl~~i~EL~~I~~~~~~l~IGA~vTl~~l~~~l 255 (1276)
.++|++|+|++||+++++.+++++++||||+++++++.+...|+.+|||++|+||++|+.++++|+|||+||+++++++
T Consensus 2 ~~~~~~P~sl~ea~~ll~~~~~a~~vaGgT~l~~~~~~~~~~~~~lIdl~~i~eL~~I~~~~~~l~IGA~vtl~~l~~~- 80 (171)
T PF00941_consen 2 PFEYFRPKSLEEALELLAKGPDARIVAGGTDLGVQMREGILSPDVLIDLSRIPELNGISEDDGGLRIGAAVTLSELEES- 80 (171)
T ss_dssp S-EEEE-SSHHHHHHHHHHGTTEEEESS-TTHHHHHHTTS---SEEEEGTTSGGGG-EEEETSEEEEETTSBHHHHHHH-
T ss_pred CeEEEccCCHHHHHHHHhcCCCCEEEeCCCccchhcccCccccceEEEeEEecccccEEEeccEEEECCCccHHHHhhc-
Confidence 5799999999999999998899999999999999999998889999999999999999999999999999999999998
Q ss_pred hhhhhcCCccchhhHHHHHHHHHhhcCcccceeeeecccccccCCCCCHHHHHHHcCCEEEEEeCCCcEEEEEhHhHhcc
Q 000805 256 RKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPLWMASGAKFHIVDCKGNIRTTMAEEFFLG 335 (1276)
Q Consensus 256 ~~~~~~~~~~~~~~~~~L~~~~~~ias~qIRN~aTiGGNi~~asp~sD~~p~Llal~A~v~l~s~~g~~R~vpl~~F~~g 335 (1276)
+.+. +.+|.|.++++++|++||||+||||||||+++|.||++|+|+||||+|+|.+.+| +|++|++|||.|
T Consensus 81 -~~~~-------~~~p~L~~~~~~ias~~IRn~aTiGGNl~~~~~~sD~~~~Llal~A~v~i~~~~g-~r~~~~~~f~~g 151 (171)
T PF00941_consen 81 -PLIQ-------QYFPALAQAARRIASPQIRNRATIGGNLCNASPASDLAPALLALDARVEIASPDG-TRTVPLEDFFTG 151 (171)
T ss_dssp -HHHH-------HHHHHHHHHHCTSS-HHHHTT-BHHHHHHHTBTT-SHHHHHHHTT-EEEEEETTE-EEEEEGGGGEEC
T ss_pred -chhh-------hhHHHHHHHHHHhCCHhHeeeeeeccccccCcccccHHHHHHHhCcEEEEEcCCe-eEEEEHHHhcCc
Confidence 4444 4899999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred CccccCCCceEEEEEEccCC
Q 000805 336 YRKVDLTSGEILLSIFLPWT 355 (1276)
Q Consensus 336 ~~~t~L~~~Eii~~I~iP~~ 355 (1276)
+++++|++||||++|+||.+
T Consensus 152 ~~~~~l~~~eli~~I~iP~~ 171 (171)
T PF00941_consen 152 PRKTDLEPGELITSIRIPKP 171 (171)
T ss_dssp TTEESS-TTEEEEEEEEES-
T ss_pred cccccCCCCcEEEEEECCCC
Confidence 99999999999999999975
No 25
>TIGR03193 4hydroxCoAred 4-hydroxybenzoyl-CoA reductase, gamma subunit. 4-hydroxybenzoyl-CoA reductase converts 4-hydroxybenzoyl-CoA to benzoyl-CoA, a common intermediate in the degradation of aromatic compounds. This protein family represents the gamma chain of this three-subunit enzyme.
Probab=99.95 E-value=5.2e-29 Score=249.12 Aligned_cols=82 Identities=39% Similarity=0.804 Sum_probs=79.2
Q ss_pred ccccccC---CCceecCCC------CcHHHHHHHHcCCCCCCCCChHHHHHHHHHHHcCCCCCCHHHHHHHccCccccCC
Q 000805 2 ACIQFNA---NKLLTSLDL------RYVLQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLAGNLCRCT 72 (1276)
Q Consensus 2 ~c~~~~~---~~~~~t~~~------~~~~q~~~~~~~~~qCg~Ctpg~v~~~~~~l~~~~~~~~~~~i~~~~~gnlCrCt 72 (1276)
||++|+. |++|+|+|+ +||+|++|+++|++|||||||||||++++||+++|+| +++||+++|+|||||||
T Consensus 57 SCl~~~~~~~G~~V~TiEgl~~~~~l~pvq~af~~~~a~QCGfCtPG~vms~~~ll~~~p~p-s~~ei~~al~GnLCRCT 135 (148)
T TIGR03193 57 ACSTLAHRVAGRKVETVEGLATNGRLSRLQQAFHERLGTQCGFCTPGMIMAAEALLRRNPSP-SRDEIRAALAGNLCRCT 135 (148)
T ss_pred ccHhhHhhcCCCcEEEeCCCCCCCCCCHHHHHHHHcCCCcCCCCCccHHHHHHHHHHcCCCC-CHHHHHHHHcCCccCCC
Confidence 8999998 899999998 5999999999999999999999999999999999999 99999999999999999
Q ss_pred CCHhHHHHHHHH
Q 000805 73 GYRPIVDAFRVF 84 (1276)
Q Consensus 73 gy~~i~~a~~~~ 84 (1276)
||++|++|++.+
T Consensus 136 GY~~I~~Av~~a 147 (148)
T TIGR03193 136 GYVKIIESVEAA 147 (148)
T ss_pred CCHHHHHHHHHh
Confidence 999999999875
No 26
>TIGR03198 pucE xanthine dehydrogenase E subunit. This gene has been characterized in B. subtilis as the Iron-sulfur cluster binding-subunit of xanthine dehydrogenase (pucE), acting in conjunction with pucC, the FAD-binding subunit and pucD, the molybdopterin binding subunit. The more common XDH complex (GenProp0640) includes the xdhA gene as the Fe-S cluster binding component.
Probab=99.95 E-value=5.6e-29 Score=251.30 Aligned_cols=84 Identities=35% Similarity=0.762 Sum_probs=81.0
Q ss_pred ccccccC---CCceecCCC-----CcHHHHHHHHcCCCCCCCCChHHHHHHHHHHHcCCCCCCHHHHHHHccCccccCCC
Q 000805 2 ACIQFNA---NKLLTSLDL-----RYVLQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLAGNLCRCTG 73 (1276)
Q Consensus 2 ~c~~~~~---~~~~~t~~~-----~~~~q~~~~~~~~~qCg~Ctpg~v~~~~~~l~~~~~~~~~~~i~~~~~gnlCrCtg 73 (1276)
||++|+. |++|+|+|+ +||+|+||+++|++|||||||||||++++||+++|.| +++||+++|+||||||||
T Consensus 59 SCl~~~~~~~G~~v~TiEgl~~~~l~pvQ~af~~~~a~QCGfCtpG~im~~~~ll~~~p~p-~~~ei~~al~gnlCRCtg 137 (151)
T TIGR03198 59 ACLTMAYQADGHEITTIEGIAENELDPCQTAFLEEGGFQCGYCTPGMVVALKALFRETPQP-SDEDMEEGLSGNLCRCTG 137 (151)
T ss_pred chHHHHHHhcCCEEEecCCcCCCCCCHHHHHHHHcCCCcCCCCCccHHHHHHHHHHcCCCC-CHHHHHHHHcCCCcCCCC
Confidence 8999998 899999998 4999999999999999999999999999999999999 999999999999999999
Q ss_pred CHhHHHHHHHHHh
Q 000805 74 YRPIVDAFRVFAK 86 (1276)
Q Consensus 74 y~~i~~a~~~~~~ 86 (1276)
|++|++|++++++
T Consensus 138 Y~~I~~Av~~~~~ 150 (151)
T TIGR03198 138 YGGIIRSACRIRR 150 (151)
T ss_pred CHHHHHHHHHHhc
Confidence 9999999998874
No 27
>PF01315 Ald_Xan_dh_C: Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain; InterPro: IPR000674 Aldehyde oxidase (1.2.3.1 from EC) catalyses the conversion of an aldehyde in the presence of oxygen and water to an acid and hydrogen peroxide. The enzyme is a homodimer, and requires FAD, molybdenum and two 2FE-2S clusters as cofactors. Xanthine dehydrogenase (1.1.1.204 from EC) catalyses the hydrogenation of xanthine to urate, and also requires FAD, molybdenum and two 2FE-2S clusters as cofactors. This activity is often found in a bifunctional enzyme with xanthine oxidase (1.1.3.22 from EC) activity too. The enzyme can be converted from the dehydrogenase form to the oxidase form irreversibly by proteolysis or reversibly through oxidation of sulphydryl groups.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1N63_E 1N60_B 1ZXI_E 1N5W_E 1N62_B 1N61_E 3AN1_B 2E3T_A 1WYG_A 2W3R_D ....
Probab=99.95 E-value=1.4e-28 Score=239.76 Aligned_cols=107 Identities=50% Similarity=0.674 Sum_probs=91.9
Q ss_pred cceeEecccCCCCCCcEEEEEEeCCCCCeEEEEeeCccccCCCCEEEEEecCCCCCCCCCCC--CCCc--ccccccCeEe
Q 000805 527 TGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGFVGIFFAEDVQGDNRIGP--VVAD--EELFASEVVT 602 (1276)
Q Consensus 527 tG~a~Y~~Di~~~~gmL~a~~vrSp~a~a~I~sID~s~A~~~pGV~~vvt~~Dipg~n~~~~--~~~d--~~~~a~~~V~ 602 (1276)
||+++|++|+++ |||||+++||||++||+|+|||+++|+++|||++|+|++|+|+.|..+. ...+ +|+|++++|+
T Consensus 1 TG~a~Y~~Di~~-~~~l~~~~vrS~~a~a~I~sid~~~A~~~pGV~~v~t~~Dip~~~~~~~~~~~~~~~~~~la~~~V~ 79 (111)
T PF01315_consen 1 TGEARYVDDIPP-PGMLYAAFVRSPIAHARIKSIDTSEALAMPGVVAVITAEDIPGINPNGGLPIPHDEPQPVLADDKVR 79 (111)
T ss_dssp TT-S-BGGGSCS-TTTEEEEEEE-SSSSEEEEEEEGHHHHHSTTEEEEEEGGGHSSGSEESCSCSTTSSEEESS-SSEES
T ss_pred CcCeEcccccCC-CCCeEEEEEecCcCcEEEEEEecHHHccCCCEEEEEEecccCccccCccccccCCCceEeccCCeEe
Confidence 899999999998 8999999999999999999999999999999999999999998765542 3334 4799999999
Q ss_pred ecCCeEEEEEECCHHHHHHhcccceeeEeecC
Q 000805 603 CVGQVIGVVVAETHEEAKLASRKVQVEYEELP 634 (1276)
Q Consensus 603 y~GqpVa~VvAet~~~A~~Aa~~V~V~ye~lp 634 (1276)
|+|||||+|||+|+++|++|+++|+|+||+||
T Consensus 80 y~GqpVa~VvAet~~~A~~Aa~~V~V~Ye~lp 111 (111)
T PF01315_consen 80 YVGQPVALVVAETREAARDAAELVKVEYEELP 111 (111)
T ss_dssp STT-EEEEEEESSHHHHHHHHHT-EEEEEE--
T ss_pred ECCCeEEEEEECCHHHHHHHhcCcEEEeEeCC
Confidence 99999999999999999999999999999987
No 28
>PRK09908 xanthine dehydrogenase subunit XdhC; Provisional
Probab=99.95 E-value=2.6e-28 Score=246.54 Aligned_cols=85 Identities=40% Similarity=0.735 Sum_probs=78.8
Q ss_pred ccccccC---CCceecCCC------CcHHHHHHHHcCCCCCCCCChHHHHHHHHHHHcCCC-CCCHHHHHHHccCccccC
Q 000805 2 ACIQFNA---NKLLTSLDL------RYVLQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQT-PPTEEQIEESLAGNLCRC 71 (1276)
Q Consensus 2 ~c~~~~~---~~~~~t~~~------~~~~q~~~~~~~~~qCg~Ctpg~v~~~~~~l~~~~~-~~~~~~i~~~~~gnlCrC 71 (1276)
||++|+. |++|+|+|+ +||||+||+++|++|||||||||||++++||++++. |++++||+++|+||||||
T Consensus 63 SCl~~a~~~~G~~V~TiEGl~~~~~l~pvQ~Af~~~~a~QCGyCtPG~ims~~aLl~~~~~~~~s~~eI~~al~GNlCRC 142 (159)
T PRK09908 63 SCLYLAAWAEGKEIRTLEGEAKGGKLSHVQQAYAKSGAVQCGFCTPGLIMATTAMLAKPREKPLTITEIRRGLAGNLCRC 142 (159)
T ss_pred hhHhhHHHhCCCEEEeecCCCCCCCCCHHHHHHHHcCCCcCCCCCccHHHHHHHHHHcCCCCCCCHHHHHHHHcCCccCC
Confidence 8999998 899999998 599999999999999999999999999999999863 339999999999999999
Q ss_pred CCCHhHHHHHHHHHh
Q 000805 72 TGYRPIVDAFRVFAK 86 (1276)
Q Consensus 72 tgy~~i~~a~~~~~~ 86 (1276)
|||++|++|++.+.+
T Consensus 143 TGY~~I~~Av~~~~~ 157 (159)
T PRK09908 143 TGYQMIVNTVLDCEK 157 (159)
T ss_pred CCCHHHHHHHHHHhh
Confidence 999999999987643
No 29
>PF01799 Fer2_2: [2Fe-2S] binding domain; InterPro: IPR002888 The [2Fe-2S] binding domain is found in a range of enzymes including dehydrogenases, oxidases and oxidoreductases. The aldehyde oxido-reductase (Mop) from the sulphate reducing anaerobic Gram-negative bacterium Desulfovibrio gigas is a homodimer of 907 amino acid residues subunits and is a member of the xanthine oxidase family. The protein contains a molybdopterin cofactor (Mo-co) and two different [2Fe-2S] centres. It is folded into four domains of which the first two bind the iron sulphur centres and the last two are involved in Mo-co binding. Mo-co is a molybdenum molybdopterin cytosine dinucleotide. Molybdopterin forms a tricyclic system with the pterin bicycle annealed to a pyran ring. The molybdopterin dinucleotide is deeply buried in the protein. The cis-dithiolene group of the pyran ring binds the molybdenum, which is coordinated by three more (oxygen) ligands [].; GO: 0016491 oxidoreductase activity, 0046872 metal ion binding, 0055114 oxidation-reduction process; PDB: 2E3T_A 1WYG_A 3AN1_B 2E1Q_C 2CKJ_A 3B9J_I 3NVY_J 1FO4_B 3NRZ_J 3AM9_A ....
Probab=99.94 E-value=6.3e-28 Score=214.99 Aligned_cols=68 Identities=56% Similarity=1.018 Sum_probs=57.6
Q ss_pred CCCCcHHHHHHHHcCCCCCCCCChHHHHHHHHHHHcCCCCCCHHHHHHHccCccccCCCCHhHHHHHHH
Q 000805 15 LDLRYVLQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLAGNLCRCTGYRPIVDAFRV 83 (1276)
Q Consensus 15 ~~~~~~~q~~~~~~~~~qCg~Ctpg~v~~~~~~l~~~~~~~~~~~i~~~~~gnlCrCtgy~~i~~a~~~ 83 (1276)
.+.+||||++|+++|++|||||||||||++++||++++.| +++||+++|+|||||||||++|++|+++
T Consensus 8 ~~~~~~iq~af~~~~a~QCGfCtpG~im~~~~ll~~~~~p-~~~ei~~al~gnlCRCTgY~~I~~Av~~ 75 (75)
T PF01799_consen 8 DGELHPIQQAFVEHGAVQCGFCTPGMIMAAYALLRRNPDP-TEEEIREALSGNLCRCTGYRPIVEAVRQ 75 (75)
T ss_dssp TTB--HHHHHHHHTT--SSSSSHHHHHHHHHHHHHHSSS--CHHHHHHHTTTS--SSSTSHHHHHHHH-
T ss_pred CCCcCHHHHHHHHhCCCcCCcchHHHHHHHHHHhhcccch-hhHHHHHHHHcCccCCCCcHHHHHHHhC
Confidence 3458999999999999999999999999999999999999 9999999999999999999999999974
No 30
>COG2080 CoxS Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs [Energy production and conversion]
Probab=99.94 E-value=3.5e-27 Score=234.97 Aligned_cols=84 Identities=40% Similarity=0.767 Sum_probs=81.0
Q ss_pred ccccccC---CCceecCCC-------CcHHHHHHHHcCCCCCCCCChHHHHHHHHHHHcCCCCCCHHHHHHHccCccccC
Q 000805 2 ACIQFNA---NKLLTSLDL-------RYVLQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLAGNLCRC 71 (1276)
Q Consensus 2 ~c~~~~~---~~~~~t~~~-------~~~~q~~~~~~~~~qCg~Ctpg~v~~~~~~l~~~~~~~~~~~i~~~~~gnlCrC 71 (1276)
||++|.+ |++|+|+|+ |||+|+||.++++.|||||||||||++++||++++.| +++||+++|+||||||
T Consensus 59 SCl~~a~~~~G~~ItTiEGl~~~~~~l~~vQ~Af~e~~~~QCGyCtpG~Imsa~~lL~~~~~p-s~~eI~~~lsGnlCRC 137 (156)
T COG2080 59 SCLTLAVQAEGAEITTIEGLAKKDGGLHPVQQAFLEHDAFQCGYCTPGQIMSATALLDRNPAP-TDEEIREALSGNLCRC 137 (156)
T ss_pred HHHHHHHHhCCCeEEEeecccCCCCCcCHHHHHHHHcCCCcCCCCcHHHHHHHHHHHHhCCCC-CHHHHHHHHhcCcccc
Confidence 8999988 899999996 5999999999999999999999999999999999999 9999999999999999
Q ss_pred CCCHhHHHHHHHHHh
Q 000805 72 TGYRPIVDAFRVFAK 86 (1276)
Q Consensus 72 tgy~~i~~a~~~~~~ 86 (1276)
|||..|++|++.++.
T Consensus 138 t~Y~~I~~Ai~~aa~ 152 (156)
T COG2080 138 TGYQNIVAAILDAAE 152 (156)
T ss_pred CCHHHHHHHHHHHHH
Confidence 999999999998875
No 31
>PRK11433 aldehyde oxidoreductase 2Fe-2S subunit; Provisional
Probab=99.93 E-value=6.5e-27 Score=247.46 Aligned_cols=84 Identities=33% Similarity=0.695 Sum_probs=79.5
Q ss_pred ccccccC---CCceecCCC------CcHHHHHHHHcCCCCCCCCChHHHHHHHHHHHc---------------CCCCCCH
Q 000805 2 ACIQFNA---NKLLTSLDL------RYVLQESLVRSHGSQCGFCTPGFIMSMYSLLRS---------------SQTPPTE 57 (1276)
Q Consensus 2 ~c~~~~~---~~~~~t~~~------~~~~q~~~~~~~~~qCg~Ctpg~v~~~~~~l~~---------------~~~~~~~ 57 (1276)
||++++. |++|+|+|+ +||+|+||+++|++|||||||||||++++||++ ++.| ++
T Consensus 107 SCl~la~~~~G~~ItTiEGL~~~~~lhpvQ~Af~~~~a~QCGyCTPG~imsa~alL~~~~~~~~~~~~~~~~~~p~p-t~ 185 (217)
T PRK11433 107 ACLTLAVMHQGAEITTIEGLGSPDNLHPMQAAFVKHDGFQCGYCTPGQICSSVAVLKEIKDGIPSHVTVDLTAAPEL-TA 185 (217)
T ss_pred eeeeehhhcCCCEEEEeCCcCCCCCCCHHHHHHHHcCCCcCCCCCccHHHHHHHHHHhccccCccccccccccCCCC-CH
Confidence 8999986 899999998 699999999999999999999999999999988 5667 99
Q ss_pred HHHHHHccCccccCCCCHhHHHHHHHHHh
Q 000805 58 EQIEESLAGNLCRCTGYRPIVDAFRVFAK 86 (1276)
Q Consensus 58 ~~i~~~~~gnlCrCtgy~~i~~a~~~~~~ 86 (1276)
+||+++|+|||||||||++|++|+++++.
T Consensus 186 ~eIrealsGNlCRCtgY~~Iv~Av~~~a~ 214 (217)
T PRK11433 186 DEIRERMSGNICRCGAYSNILEAIEDVAG 214 (217)
T ss_pred HHHHHHHcCCccCCCCcHHHHHHHHHHHh
Confidence 99999999999999999999999998875
No 32
>PF03450 CO_deh_flav_C: CO dehydrogenase flavoprotein C-terminal domain; InterPro: IPR005107 Proteins containing this domain form structural complexes with other known families, such as IPR008274 from INTERPRO and IPR001041 from INTERPRO]. The carbon monoxide (CO) dehydrogenase of Oligotropha carboxidovorans is a heterotrimeric complex composed of a apoflavoprotein, a molybdoprotein, and an iron-sulphur protein. It can be dissociated with sodium dodecylsulphate []. CO dehydrogenase catalyzes the oxidation of CO according to the following equation []: CO + H2O = CO2 + 2e + 2H+ Subunit S represents the iron-sulphur protein of CO dehydrogenase and is clearly divided into a C- and an N-terminal domain, each binding a [2Fe-2S] cluster [].; PDB: 3EUB_K 3NS1_K 3NVV_B 1FO4_B 3AM9_A 3AX7_B 3BDJ_A 3ETR_B 3UNI_A 3AMZ_A ....
Probab=99.74 E-value=1.4e-17 Score=160.98 Aligned_cols=103 Identities=26% Similarity=0.428 Sum_probs=96.0
Q ss_pred EEEEEeccCcccccccceEEEEEEecCCcceEEEEEEEEEecCCCcceeHHHHHHHhcCCCCCHHHHHHHHHHhhccCCC
Q 000805 362 KEFKQAHRRDDDIALVNAGMRVYLEEKDEEWVVSDALLVYGGVAPLSLSAKKTKTFIVGKSWSQELLQNALKILQTDIIL 441 (1276)
Q Consensus 362 ~~~K~~~R~~~d~a~v~~A~~~~~~~~~~~~~i~~~ria~Ggv~~~p~ra~~~E~~L~Gk~~~~~~l~~a~~~l~~e~~~ 441 (1276)
++||+.+|+++|++++|+|+.+.+++++ +|+++||++||++++|+|+.++|++|.|++|++++++++.+.+.+++.|
T Consensus 1 ~ayk~~~R~~~d~a~v~~a~~~~~~~~~---~i~~~ria~g~v~~~p~r~~~~E~~L~g~~~~~~~~~~~~~~~~~~~~~ 77 (103)
T PF03450_consen 1 SAYKIGRRKANDIAIVNVAVLVSVDDDG---RIEDARIAVGGVAPTPVRAEEVEAALIGKPLSEETLEEAAEAVSEEIDP 77 (103)
T ss_dssp EEEEESSSSSSSSSSEEEEEEEEEETTS---EEEEEEEEEESSSSSTEE-HHHHHHTTTSBSSHHHHHHHHHHHHHHTHH
T ss_pred CCeeccCccccHHHHHhhhheEEEecCc---eEEEEEEEEeccccceeehHHHHHHHhhcchhhhhHHHHHHHHHhcCCC
Confidence 3569999999999999999999999877 8999999999999999999999999999999999999999999999987
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 000805 442 KEDAPGGMVDFRKSLTLSFFFKFFLWV 468 (1276)
Q Consensus 442 ~~~~~~~s~~YR~~la~~l~~r~l~~~ 468 (1276)
.++ .++|++||++|+.+|++|+|.++
T Consensus 78 ~~d-~r~s~~YR~~l~~~l~~ral~~~ 103 (103)
T PF03450_consen 78 ISD-MRASAEYRRHLARVLVRRALEEV 103 (103)
T ss_dssp CTT-TTBTHHHHHHHHHHHHHHHHHHH
T ss_pred CCC-CCCCHHHHHHHHHHHHHHHHHhC
Confidence 766 68999999999999999999875
No 33
>COG1529 CoxL Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs [Energy production and conversion]
Probab=99.55 E-value=3e-15 Score=190.59 Aligned_cols=473 Identities=16% Similarity=0.098 Sum_probs=291.3
Q ss_pred cCCCCcCC-CcccccCccccccceeEecccCCCCCCcEEEEEEeCCCCCeEEEEeeCccccCCCCEEEEEecCCCCCCCC
Q 000805 507 TKHGTSVG-SPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGFVGIFFAEDVQGDNR 585 (1276)
Q Consensus 507 ~~~~~~vG-k~~~r~d~~~kvtG~a~Y~~Di~~~~gmL~a~~vrSp~a~a~I~sID~s~A~~~pGV~~vvt~~Dipg~n~ 585 (1276)
+..+.++| +..++ |+. ++|+.+.|..|..+ ++||++.+.+++..-.+|.. |...+...++++.+...
T Consensus 179 ~~~~E~~g~~a~~~-d~~-~lt~~~~tQ~~~~~-~~~l~~~l~~p~~~vrvi~~-dvGggfG~K~~~~~~~~-------- 246 (731)
T COG1529 179 PNPMEPHGVVAVPD-DGD-KLTVWASTQIPHRL-RGMLAAVLGIPPSKVRVISP-DVGGGFGSKGVVYVEEI-------- 246 (731)
T ss_pred ccCcccccceeeEc-CCC-eEEEEEccCCchHH-HHHHHHHhCCCHHHeEEecC-CCCcccCCcccceeHHH--------
Confidence 36778899 77888 887 99999999999998 79999999955555555555 88888887776544322
Q ss_pred CCCCCCcccccccCeEeecCCeEEEEEECCHHHHHHhcccceeeEeecC-CCCCHHHHHh-cCCCCCC-CcceeecCC--
Q 000805 586 IGPVVADEELFASEVVTCVGQVIGVVVAETHEEAKLASRKVQVEYEELP-AILSIQEAID-AKSFHPN-TERCFRKGD-- 660 (1276)
Q Consensus 586 ~~~~~~d~~~~a~~~V~y~GqpVa~VvAet~~~A~~Aa~~V~V~ye~lp-~v~~~~~A~~-~~s~~~~-~~~~~~~Gd-- 660 (1276)
.+-.-..-.|-||.++- ..+...+.....+ ...+.+-+.+ ++.+... .....+.|+
T Consensus 247 ----------~~~~aa~~~grpVk~~~---------tR~e~~~~~~~~~~~~~~~~~~a~~dg~l~~~~~~~~~~~Gay~ 307 (731)
T COG1529 247 ----------LAALAAVVAGRPVKWIE---------TREELFVATGHRRATLIDVKLGADKDGRLLAIKGTVAADTGAYN 307 (731)
T ss_pred ----------HHHHHHHhcCCCeEEec---------chHHhhhccCCCCCceEEeeeecCcCCcEEeeeeeEEecCCCcc
Confidence 11111112233443333 2222223211111 1112111111 1111000 011123343
Q ss_pred ---cccccc-cCCCccEEEEEEEeCcccccCCCCCeeEEEEecCCCeEEEEeCCCChHHHHHHHHHHhCCCCCcEEEEec
Q 000805 661 ---VDICFQ-SGQCDKIIEGEVRVGGQEHFYLEPHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTK 736 (1276)
Q Consensus 661 ---~~~af~-~~~a~~vve~~~~~~~~~H~~mEp~~~~a~~~~~~g~l~V~~stQ~p~~~r~~vA~~Lglp~~kV~V~~~ 736 (1276)
+...+. .....+.++..|..++..|..||| ++..... ++. ..||.+...++.+|+.|||++.+||++..
T Consensus 308 ~~~~~~~~~~~~~g~Y~i~~~~~~~~~v~tn~~p-~~~~Rg~--g~~----~~~~a~E~~~d~lA~~Lgidp~eiR~~n~ 380 (731)
T COG1529 308 GPTVPAAAAGLARGPYKIEAVYIEPYLVHTNMPP-NGAYRGA--GRP----EGTFALERAVDELAEELGIDPVEIRLRNL 380 (731)
T ss_pred ccchhHHHHHhcCCceecccceeeeEEEEcCCCC-CcccccC--CCc----hhHHHHHHHHHHHHHHhCCCHHHHhhhhc
Confidence 222220 133457999999999999999999 6666553 222 89999999999999999999999999999
Q ss_pred ccCCCCC-CCCCcchHHHHHHHHHHHhCC---CCEEEEechHHHHhhcCCCCCeEEE--------EEEEECCCCcEEEEE
Q 000805 737 RIGGGFG-GKETRSAFIAAAAAVPSFLLN---RPVNLTLDRDIDMMISGQRHSFLGK--------YKVGFTNEGKVLALD 804 (1276)
Q Consensus 737 ~vGGgFG-gK~~~~~~~a~~aAlaA~~~g---rPVkl~~tR~ed~~~~~~R~~~~~~--------~k~g~~~dG~i~a~~ 804 (1276)
..+|+|| ++...+..+...+..++++++ ||+|..|+|++++..+..+.-+... .++-++.||++....
T Consensus 381 ~~~g~~~~~~~~~~~~~~~~~~~~ak~~~~~~~~~k~~~~re~~~~~G~g~a~~~~~~~~~~~~~a~v~~~~~g~v~v~~ 460 (731)
T COG1529 381 IRGGPFGLGRRYDSGDYLEELDEAAKRFGWSERPVKPIWTREGDLRRGVGRAMYTEPSGAGPGEGARVRLEADGTVTVRT 460 (731)
T ss_pred cccCCCCCcccccCccHHHHHHHHHHhcCcccccCChhhhhcCCeeeeeEEEEEEEeccCCCCCcEEEEEcCCCcEEEEE
Confidence 9999999 555444556667778888887 9999999999998876555544333 344556677776554
Q ss_pred EEEEecCCCCCCchHHHHHHHhhccCCCcccCeEEEEEEEEecCCCCCCcccCCChhhhHhHHHHHHHHHHHHcCCCHHH
Q 000805 805 LEIYNNAGNSLDLSLAVLERAMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITENWIQRVAVEVRKSPEE 884 (1276)
Q Consensus 805 ~~~~~d~Ga~~~~~~~v~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~~a~Rg~G~~q~~fa~E~~md~lA~~lg~DP~e 884 (1276)
... +.|. +.-........-.|.||+-+++.....|..++ .+||.+|+.++.|+.|.+++++++..+.||..
T Consensus 461 g~~--~~G~------G~~t~~~q~~ae~lgip~~~V~v~~gDt~~~~-~~~~s~GS~~~~~~~~A~~~a~~~l~~k~~~~ 531 (731)
T COG1529 461 GAT--DIGQ------GTDTVLAQIAAEELGIPPDDVEVVHGDTDVPV-GGWGSVGSRGTAVAGSAVIDAAAKLAEKDPVA 531 (731)
T ss_pred CCc--cCCC------cHHHHHHHHHHHHhCCCHHHEEEEecCCCCCC-CCCCCcCcccccchHHHHHHHHHHHHHHHHHH
Confidence 332 1221 11111222235679999999999999998775 78999999999999999999999999999999
Q ss_pred HHHHhcCCCCCccccCccccCCCHHHHHHHHHHhCCChhhHHhHhhhhccCCccccceEEEeeeeccccccccCCceeEE
Q 000805 885 IREINFQGEGSILHYGQQLQHCTLFPLWNELKLSCDFLNARKEVDNFNLNNRWKKRGIAMVPTKFGISFTLKLMNQAGAL 964 (1276)
Q Consensus 885 ~R~~Nl~~~g~~~~~g~~~~~~~l~~~l~~~~~~~~~~~r~~~~~~fn~~~~~~~rGia~~~~~~g~~~~~~~~~~~~a~ 964 (1276)
+|+..-....+ -.|+.......|..+...+......++-+.+|+++.. .|+..... .....-++
T Consensus 532 aa~~l~~~~~~--------------~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~-~~~~~~~~-~~~A~~~E 595 (731)
T COG1529 532 AARMLGADAED--------------VVLEDGAFKVGGGDRRSAVSLKEVAGKGLAPGLAVAA-SFGSDNTY-PYGAHIAE 595 (731)
T ss_pred HHhhhCCChhH--------------eeeccCeeeeccCCccceeeHHHhhhccccCcccccc-cccccccc-cceeEEEE
Confidence 99876221111 1344444455554321100000000111346666542 22221000 01234588
Q ss_pred EEEe-cCCeEEEE--EcCccCCcchHHHH--HH-------HHHHHh--------------------------CCCcccEE
Q 000805 965 VHVY-TDGTVLVT--HGGVEMGQGLHTKV--AQ-------VAASAF--------------------------NIPLSSVF 1006 (1276)
Q Consensus 965 V~l~-~DGsV~V~--~g~~e~GqG~~T~~--~q-------iaAe~L--------------------------gip~~~V~ 1006 (1276)
|+|+ .+|+|.|. ....|.|.=++=++ .| =.+..| .+|.-.|+
T Consensus 596 V~Vd~~tG~vrV~r~~~~~D~G~vvNP~~~~~Qv~GGi~~Gig~aL~E~~i~d~~g~~~~~n~~dY~ip~~~d~P~iev~ 675 (731)
T COG1529 596 VEVDPETGEVRVLRVVAVDDCGRVVNPKLAEGQVEGGILMGIGMALYEEAIYDEDGQLLNSNLADYGIPRAADAPEVEVE 675 (731)
T ss_pred EEEECCCCcEEEEEEEEEEecCCccCHHHHHHHHHhHHHHHHHHHhhccceECCCCCcCCCCcccccCCCcccCCceEEE
Confidence 9999 58988885 56667664333221 12 122222 24555556
Q ss_pred EecCCCCCCCCCCCCccchhhhHHHHHHHHHHHHHH
Q 000805 1007 VSETSTDKVPNASPTAASASSDIYGAAVLDACEQIK 1042 (1276)
Q Consensus 1007 v~~~dT~~~p~~~~t~~Sr~t~~~g~Av~~Ac~~l~ 1042 (1276)
+.+......|.+....|=-++.-...|+.+|...+-
T Consensus 676 ~v~~p~~~~p~g~kGvGE~g~~~~~pAvaNAV~~At 711 (731)
T COG1529 676 FVESPSPFGPLGAKGVGEGGIIGIAPAIANAVFDAT 711 (731)
T ss_pred EecCCCCCCCCCCCCcCcCccCchhHHHHHHHHHHh
Confidence 655433334666666666677777888888887763
No 34
>PRK14653 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=96.99 E-value=0.0038 Score=71.80 Aligned_cols=159 Identities=18% Similarity=0.133 Sum_probs=103.0
Q ss_pred CCcccccCCCeEEEecCCHHHHHHHHhcC---CCcEEEEccchhhHHHHhCcCCCCeEEeCCCCCCCccEEEcCCeEEEc
Q 000805 167 NPLNLSGFGGLKWYRPLKLQHLLELKSKY---PDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIG 243 (1276)
Q Consensus 167 ~~~~~~~~~~~~~~~P~sl~eal~ll~~~---~~a~lvaGgTdl~v~~~~~~~~~~~lIdl~~i~EL~~I~~~~~~l~IG 243 (1276)
.++.+ |..-.-|+.|+|.+|+.++++.. -...++.|||-+.+. .. ..+..+|.+++ |+.|+.+++.++.|
T Consensus 26 tt~~i-GG~A~~~v~p~s~eel~~~~~~~~~~~p~~vlG~GSNlLv~--d~-g~~gvVI~l~~---~~~i~i~~~~v~v~ 98 (297)
T PRK14653 26 VSFKI-GGPVPLFAIPNSTNGFIETINLLKEGIEVKILGNGTNVLPK--DE-PMDFVVVSTER---LDDIFVDNDKIICE 98 (297)
T ss_pred CEeee-CcEEEEEEecCCHHHHHHHHHHHhcCCCEEEEcCCeeEEEe--cC-CccEEEEEeCC---cCceEEeCCEEEEe
Confidence 34555 55455789999999999877522 237789999999873 22 12367788755 66777777899999
Q ss_pred ccccHHHHHHHhhhhhhcCCccchhhHHHHHHHHHhhcCcccceeeeecccccc-cCC-CCCHHHHHHHcCCEEEEEeCC
Q 000805 244 AAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICT-ASP-ISDLNPLWMASGAKFHIVDCK 321 (1276)
Q Consensus 244 A~vTl~~l~~~l~~~~~~~~~~~~~~~~~L~~~~~~ias~qIRN~aTiGGNi~~-asp-~sD~~p~Llal~A~v~l~s~~ 321 (1276)
|++++.+|...+.+ ..+. . +..++.. =|||||++++ |.- -.++.=.+. +|++.+ +
T Consensus 99 AG~~l~~L~~~~~~--~GL~--------G----lE~l~gI----PGTVGGAv~mNAGayG~ei~d~l~----~V~~~d-~ 155 (297)
T PRK14653 99 SGLSLKKLCLVAAK--NGLS--------G----FENAYGI----PGSVGGAVYMNAGAYGWETAENIV----EVVAYD-G 155 (297)
T ss_pred CCCcHHHHHHHHHH--CCCc--------c----hhhhcCC----chhHHHHHHHhCccCchhhheeEE----EEEEEC-C
Confidence 99999999987432 1111 1 2234444 3789999864 322 122333333 677766 3
Q ss_pred CcEEEEEhHhHhccCccccCCC--ceEEEEEEccCC
Q 000805 322 GNIRTTMAEEFFLGYRKVDLTS--GEILLSIFLPWT 355 (1276)
Q Consensus 322 g~~R~vpl~~F~~g~~~t~L~~--~Eii~~I~iP~~ 355 (1276)
|+.++++-+|.--+||...++. +-||+++.+...
T Consensus 156 g~v~~~~~~e~~f~YR~S~~~~~~~~iI~~a~f~L~ 191 (297)
T PRK14653 156 KKIIRLGKNEIKFSYRNSIFKEEKDLIILRVTFKLK 191 (297)
T ss_pred CEEEEEchhhccccCccccCCCCCcEEEEEEEEEEe
Confidence 4467788888777888777654 237777766543
No 35
>PRK14652 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=96.96 E-value=0.0038 Score=72.21 Aligned_cols=158 Identities=14% Similarity=0.194 Sum_probs=98.8
Q ss_pred CcccccCCCeEEEecCCHHHHHHHHhc---CC-CcEEEEccchhhHHHHhCcCCCCeEEeCCCCCCCccEEEcCCeEEEc
Q 000805 168 PLNLSGFGGLKWYRPLKLQHLLELKSK---YP-DSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIG 243 (1276)
Q Consensus 168 ~~~~~~~~~~~~~~P~sl~eal~ll~~---~~-~a~lvaGgTdl~v~~~~~~~~~~~lIdl~~i~EL~~I~~~~~~l~IG 243 (1276)
++.+ +..-.-++.|+|.+|+.++++. +. ...++.|||.+.+. .+ ..+..+|++++. +..|..+++.+++|
T Consensus 29 t~~i-gg~a~~~v~p~~~edl~~~v~~a~~~~ip~~vlGgGSNllv~--d~-g~~gvVI~l~~~--~~~i~~~~~~v~v~ 102 (302)
T PRK14652 29 AVRV-GGPADLLVRPADPDALSALLRAVRELGVPLSILGGGANTLVA--DA-GVRGVVLRLPQD--FPGESTDGGRLVLG 102 (302)
T ss_pred Eeec-CCcceEEEEcCCHHHHHHHHHHHHHCCCcEEEEcCCcceeec--CC-CEeeEEEEecCC--cceEEecCCEEEEE
Confidence 4555 5445678899999999887752 22 47789999998642 21 123578998752 55677777899999
Q ss_pred ccccHHHHHHHhhhhhhcCCccchhhHHHHHHHHHhhcCcccceeeeecccccccC--CCCCHHHHHHHcCCEEEEEeCC
Q 000805 244 AAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTAS--PISDLNPLWMASGAKFHIVDCK 321 (1276)
Q Consensus 244 A~vTl~~l~~~l~~~~~~~~~~~~~~~~~L~~~~~~ias~qIRN~aTiGGNi~~as--p~sD~~p~Llal~A~v~l~s~~ 321 (1276)
|++++.+|.+.+.+. .+. -+...++.+ ||+||++.+-. ..+++.=.+. .|++...+
T Consensus 103 AG~~~~~L~~~~~~~--GL~------------GlE~l~gIP----GTvGGav~mNaGa~ggei~d~v~----~v~vv~~~ 160 (302)
T PRK14652 103 AGAPISRLPARAHAH--GLV------------GMEFLAGIP----GTLGGAVAMNAGTKLGEMKDVVT----AVELATAD 160 (302)
T ss_pred CCCcHHHHHHHHHHc--CCc------------ccccccCCC----cchhHHHHHcCCCCceEhhheEE----EEEEECCC
Confidence 999999999875321 111 112223332 69999997542 2222222222 44555566
Q ss_pred CcEEEEEhHhHhccCccccCCCceEEEEEEccC
Q 000805 322 GNIRTTMAEEFFLGYRKVDLTSGEILLSIFLPW 354 (1276)
Q Consensus 322 g~~R~vpl~~F~~g~~~t~L~~~Eii~~I~iP~ 354 (1276)
| .++++-+|..-+||...++.+-||+++.+..
T Consensus 161 G-~~~~~~~e~~f~YR~s~~~~~~II~~a~~~L 192 (302)
T PRK14652 161 G-AGFVPAAALGYAYRTCRLPPGAVITRVEVRL 192 (302)
T ss_pred C-cEEeehhhcCcccceeccCCCeEEEEEEEEE
Confidence 6 6677777766677766555445666665544
No 36
>TIGR00179 murB UDP-N-acetylenolpyruvoylglucosamine reductase. This model describes MurB, UDP-N-acetylenolpyruvoylglucosamine reductase, which is also called UDP-N-acetylmuramate dehydrogenase. It is part of the pathway for the biosynthesis of the UDP-N-acetylmuramoyl-pentapeptide that is a precursor of bacterial peptidoglycan.
Probab=96.50 E-value=0.013 Score=67.36 Aligned_cols=160 Identities=14% Similarity=0.152 Sum_probs=97.9
Q ss_pred cccccCCCeEEEecCCHHHHHHHHhc---C-CCcEEEEccchhhHHHHhCcCCCCeEEeCCCCCCCccEEEcCCeEEEcc
Q 000805 169 LNLSGFGGLKWYRPLKLQHLLELKSK---Y-PDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGA 244 (1276)
Q Consensus 169 ~~~~~~~~~~~~~P~sl~eal~ll~~---~-~~a~lvaGgTdl~v~~~~~~~~~~~lIdl~~i~EL~~I~~~~~~l~IGA 244 (1276)
+.+ +..-.-|+.|+|.+|+.++++. + -...+++|||.+.+. . ......+|++.+.. +.+...++.+++||
T Consensus 7 ~~i-gg~a~~~v~p~s~edl~~~l~~a~~~~~p~~vlGgGSNll~~--d-~~~~gvvi~l~~~~--~~~~~~~~~v~v~a 80 (284)
T TIGR00179 7 YKI-GGNARHIVCPESIEQLVNVLDNAKEEDQPLLILGEGSNLLIL--D-DGRGGVIINLGKGI--DIEDDEGEYVHVGG 80 (284)
T ss_pred eec-CceeeEEEEeCCHHHHHHHHHHHHHcCCCEEEEecceEEEEc--c-CCcCeEEEECCCCc--eEEEecCCEEEEEc
Confidence 444 4435679999999999987752 2 247899999999852 1 12235789986632 22223356899999
Q ss_pred cccHHHHHHHhhhhhhcCCccchhhHHHHHHHHHhhcCcccceeeeecccccccCCCCCHHHHHHHcCCEEEEEeCCCcE
Q 000805 245 AVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPLWMASGAKFHIVDCKGNI 324 (1276)
Q Consensus 245 ~vTl~~l~~~l~~~~~~~~~~~~~~~~~L~~~~~~ias~qIRN~aTiGGNi~~asp~sD~~p~Llal~A~v~l~s~~g~~ 324 (1276)
++++.+|.+.+.+. .+. -+..+++.+ |||||++++-.-.-..-.-=..+ .|++...+|+.
T Consensus 81 G~~~~~l~~~~~~~--Gl~------------GlE~l~giP----GtvGGai~mNAGayG~~i~d~l~--~v~vv~~~G~~ 140 (284)
T TIGR00179 81 GENWHKLVKYALKN--GLS------------GLEFLAGIP----GTVGGAVIMNAGAYGVEISEVLV--YATILLATGKT 140 (284)
T ss_pred CCcHHHHHHHHHHC--CCc------------ccccCCCCC----chHHHHHHHhcccchhehhheEE--EEEEEeCCCCE
Confidence 99999999875321 111 111223322 58999987543221110000112 23444566757
Q ss_pred EEEEhHhHhccCccccCCCce--EEEEEEccC
Q 000805 325 RTTMAEEFFLGYRKVDLTSGE--ILLSIFLPW 354 (1276)
Q Consensus 325 R~vpl~~F~~g~~~t~L~~~E--ii~~I~iP~ 354 (1276)
++++-+|.--+||...++.+. ++++..+..
T Consensus 141 ~~~~~~~~~f~YR~S~f~~~~~~iil~a~~~l 172 (284)
T TIGR00179 141 EWLTNEQLGFGYRTSIFQHKYVGLVLKAEFQL 172 (284)
T ss_pred EEEEHHHccccCCccccCCCCcEEEEEEEEEe
Confidence 889999988899988887643 666665543
No 37
>PRK13905 murB UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=96.47 E-value=0.012 Score=68.07 Aligned_cols=161 Identities=21% Similarity=0.304 Sum_probs=104.3
Q ss_pred CcccccCCCeEEEecCCHHHHHHHHhc---CC-CcEEEEccchhhHHHHhCcCCCCeEEeCCCCCCCccEEEcCCeEEEc
Q 000805 168 PLNLSGFGGLKWYRPLKLQHLLELKSK---YP-DSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIG 243 (1276)
Q Consensus 168 ~~~~~~~~~~~~~~P~sl~eal~ll~~---~~-~a~lvaGgTdl~v~~~~~~~~~~~lIdl~~i~EL~~I~~~~~~l~IG 243 (1276)
++.+ +.....++.|+|.+|+.++++. +. ...++.|||.+.+. .. .....+||+++ .|+.|+.+++.+++|
T Consensus 24 t~~i-gg~a~~vv~P~s~edv~~~v~~a~~~~~p~~v~GgGsnll~~--d~-g~~gvvI~l~~--~l~~i~~~~~~v~v~ 97 (298)
T PRK13905 24 SFRV-GGPADYLVEPADIEDLQEFLKLLKENNIPVTVLGNGSNLLVR--DG-GIRGVVIRLGK--GLNEIEVEGNRITAG 97 (298)
T ss_pred eeec-CceEeEEEeCCCHHHHHHHHHHHHHcCCCEEEEeCCceEEec--CC-CcceEEEEecC--CcceEEecCCEEEEE
Confidence 4455 4434567999999999887752 22 47889999998641 11 12368899873 477777778899999
Q ss_pred ccccHHHHHHHhhhhhhcCCccchhhHHHHHHHHHhhcCcccceeeeecccccc-cCCCC-CHHHHHHHcCCEEEEEeCC
Q 000805 244 AAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICT-ASPIS-DLNPLWMASGAKFHIVDCK 321 (1276)
Q Consensus 244 A~vTl~~l~~~l~~~~~~~~~~~~~~~~~L~~~~~~ias~qIRN~aTiGGNi~~-asp~s-D~~p~Llal~A~v~l~s~~ 321 (1276)
|++++.+|.+.+.+. .+. -+...++.+ +||||.+++ +.-.+ ++.=.+ . .|++...+
T Consensus 98 aG~~~~~L~~~l~~~--Gl~------------gle~~~gip----GTVGGai~~NaG~~G~~~~d~v--~--~v~vv~~~ 155 (298)
T PRK13905 98 AGAPLIKLARFAAEA--GLS------------GLEFAAGIP----GTVGGAVFMNAGAYGGETADVL--E--SVEVLDRD 155 (298)
T ss_pred CCCcHHHHHHHHHHc--CCC------------cchhccCCC----cchhHHHHHcCCcCceEhheeE--E--EEEEEeCC
Confidence 999999999875432 110 111223332 689998863 32222 111111 1 24455566
Q ss_pred CcEEEEEhHhHhccCccccCCC-ceEEEEEEccCCC
Q 000805 322 GNIRTTMAEEFFLGYRKVDLTS-GEILLSIFLPWTR 356 (1276)
Q Consensus 322 g~~R~vpl~~F~~g~~~t~L~~-~Eii~~I~iP~~~ 356 (1276)
|+.++++-+|.+-+||...+.. ..||+++.+-..+
T Consensus 156 G~~~~~~~~e~~~~yR~s~~~~~~gII~~~~l~l~~ 191 (298)
T PRK13905 156 GEIKTLSNEELGFGYRHSALQEEGLIVLSATFQLEP 191 (298)
T ss_pred CCEEEEEHHHcCCcCccccCCCCCEEEEEEEEEEcC
Confidence 7678888889888999887763 4699998876553
No 38
>PRK13906 murB UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=96.24 E-value=0.027 Score=65.40 Aligned_cols=152 Identities=15% Similarity=0.230 Sum_probs=99.8
Q ss_pred CeEEEecCCHHHHHHHHh---cCC-CcEEEEccchhhHHHHhCcCCCCeEEeCCCCCCCccEEEcCCeEEEcccccHHHH
Q 000805 176 GLKWYRPLKLQHLLELKS---KYP-DSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTEL 251 (1276)
Q Consensus 176 ~~~~~~P~sl~eal~ll~---~~~-~a~lvaGgTdl~v~~~~~~~~~~~lIdl~~i~EL~~I~~~~~~l~IGA~vTl~~l 251 (1276)
-.-++.|.|.+|+.++++ ++. ...+++|||.+.+. .+. ....+|++++ |+.|+.+++.+++||++++.+|
T Consensus 37 A~~~v~p~~~edv~~~v~~a~~~~ip~~vlGgGSNll~~--d~g-~~GvvI~l~~---l~~i~~~~~~v~v~aG~~~~~l 110 (307)
T PRK13906 37 ADFYITPTKNEEVQAVVKYAYQNEIPVTYLGNGSNIIIR--EGG-IRGIVISLLS---LDHIEVSDDAIIAGSGAAIIDV 110 (307)
T ss_pred eEEEEEcCCHHHHHHHHHHHHHcCCCEEEEcCceeEeec--CCC-cceEEEEecC---ccceEEeCCEEEEECCCcHHHH
Confidence 456899999999988775 222 37789999998752 221 2367899865 6777777889999999999999
Q ss_pred HHHhhhhhhcCCccchhhHHHHHHHHHhhcCcccceeeeeccccccc-CCC-CCHHHHHHHcCCEEEEEeCCCcEEEEEh
Q 000805 252 LKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTA-SPI-SDLNPLWMASGAKFHIVDCKGNIRTTMA 329 (1276)
Q Consensus 252 ~~~l~~~~~~~~~~~~~~~~~L~~~~~~ias~qIRN~aTiGGNi~~a-sp~-sD~~p~Llal~A~v~l~s~~g~~R~vpl 329 (1276)
.+.+.+. .+. .+ ...++. -|||||++.+- .-. +++.=.|+ .|++...+|+.++++-
T Consensus 111 ~~~~~~~--Gl~--------Gl----E~~~gI----PGtVGGav~mNaGayGg~i~D~l~----~v~vv~~~G~~~~~~~ 168 (307)
T PRK13906 111 SRVARDY--ALT--------GL----EFACGI----PGSIGGAVYMNAGAYGGEVKDCID----YALCVNEQGSLIKLTT 168 (307)
T ss_pred HHHHHHc--CCc--------cc----hhhcCC----CccHhHHHHhhCCcchhhhhhhee----EEEEEeCCCCEEEEEH
Confidence 9874321 111 11 112222 26899998643 222 12222221 2444455676888999
Q ss_pred HhHhccCccccCCCc-eEEEEEEccCC
Q 000805 330 EEFFLGYRKVDLTSG-EILLSIFLPWT 355 (1276)
Q Consensus 330 ~~F~~g~~~t~L~~~-Eii~~I~iP~~ 355 (1276)
+|..-+||...++.+ .+|+++.+-..
T Consensus 169 ~e~~f~YR~S~~~~~~~ii~~~~~~l~ 195 (307)
T PRK13906 169 KELELDYRNSIIQKEHLVVLEAAFTLA 195 (307)
T ss_pred HHccCcCCcccCCCCCEEEEEEEEEEC
Confidence 998889999888764 47777766544
No 39
>PRK14650 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=96.23 E-value=0.032 Score=64.18 Aligned_cols=158 Identities=17% Similarity=0.230 Sum_probs=103.6
Q ss_pred CCcccccCCCeEEEecCCHHHHHHHHhcC----CCcEEEEccchhhHHHHhCcCCCCeEEeCCCCCCCccEEEcCCeEEE
Q 000805 167 NPLNLSGFGGLKWYRPLKLQHLLELKSKY----PDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEI 242 (1276)
Q Consensus 167 ~~~~~~~~~~~~~~~P~sl~eal~ll~~~----~~a~lvaGgTdl~v~~~~~~~~~~~lIdl~~i~EL~~I~~~~~~l~I 242 (1276)
.++.+ |..-..|+.|.|.+|+.++++.. -...++.||+-+++. .+......+|.+.+ ++.|+..++.|++
T Consensus 25 tt~~i-GG~A~~~~~p~~~~eL~~~l~~~~~~~~p~~vlG~GSNlLv~--D~g~~~g~vi~~~~---~~~i~~~~~~v~a 98 (302)
T PRK14650 25 TTYKI-GGISKLFLTPKTIKDAEHIFKAAIEEKIKIFILGGGSNILIN--DEEEIDFPIIYTGH---LNKIEIHDNQIVA 98 (302)
T ss_pred ceeee-CcEEEEEEecCCHHHHHHHHHHHHHcCCCEEEEeceeEEEEE--CCCccceEEEEECC---cCcEEEeCCEEEE
Confidence 45666 55456788999999998887532 137889999999872 22102345666543 6777777789999
Q ss_pred cccccHHHHHHHhhhhhhcCCccchhhHHHHHHHHHhhcCcccceeeeecccccc-cC----CCCCHHHHHHHcCCEEEE
Q 000805 243 GAAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICT-AS----PISDLNPLWMASGAKFHI 317 (1276)
Q Consensus 243 GA~vTl~~l~~~l~~~~~~~~~~~~~~~~~L~~~~~~ias~qIRN~aTiGGNi~~-as----p~sD~~p~Llal~A~v~l 317 (1276)
||++.+.++.....+ ..+ .. +..++..+ ||+||-+++ |. -++|.. -+|++
T Consensus 99 ~AG~~~~~l~~~~~~--~gl--------~G----lE~l~gIP----GTVGGAv~mNAGayG~ei~d~l-------~sV~~ 153 (302)
T PRK14650 99 ECGTNFEDLCKFALQ--NEL--------SG----LEFIYGLP----GTLGGAIWMNARCFGNEISEIL-------DKITF 153 (302)
T ss_pred EeCCcHHHHHHHHHH--cCC--------ch----hhhhcCCC----cchhHHHHhhCCccccchheeE-------EEEEE
Confidence 999999999887422 111 11 22334443 677776643 21 123322 23555
Q ss_pred EeCCCcEEEEEhHhHhccCccccCCC-ceEEEEEEccCC
Q 000805 318 VDCKGNIRTTMAEEFFLGYRKVDLTS-GEILLSIFLPWT 355 (1276)
Q Consensus 318 ~s~~g~~R~vpl~~F~~g~~~t~L~~-~Eii~~I~iP~~ 355 (1276)
...+|+.++++-+|.--+||...++. +.+|+++.+...
T Consensus 154 ~d~~g~~~~~~~~e~~f~YR~S~f~~~~~iIl~a~f~L~ 192 (302)
T PRK14650 154 IDEKGKTICKKFKKEEFKYKISPFQNKNTFILKATLNLK 192 (302)
T ss_pred EECCCCEEEEEHHHcCcccccccCCCCCEEEEEEEEEEc
Confidence 55666578899999888999988876 458888877654
No 40
>PF01565 FAD_binding_4: FAD binding domain This is only a subset of the Pfam family; InterPro: IPR006094 Various enzymes use FAD as a co-factor, most of these enzymes are oxygen-dependent oxidoreductases, containing a covalently bound FAD group which is attached to a histidine via an 8-alpha-(N3-histidyl)-riboflavin linkage. One of the enzymes Vanillyl-alcohol oxidase (VAO, 1.1.3.38 from EC) has a solved structure, the alignment includes the FAD binding site, called the PP-loop, between residues 99-110 []. The FAD molecule is covalently bound in the known structure, however the residue that links to the FAD is not in the alignment. VAO catalyses the oxidation of a wide variety of substrates, ranging from aromatic amines to 4-alkylphenols. ; GO: 0008762 UDP-N-acetylmuramate dehydrogenase activity, 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZR6_A 3HSU_A 2AXR_A 3D2J_A 3D2H_A 3FW9_A 3FW8_A 3FW7_A 3GSY_A 3FWA_A ....
Probab=95.92 E-value=0.018 Score=58.74 Aligned_cols=102 Identities=12% Similarity=0.136 Sum_probs=69.0
Q ss_pred EEEecCCHHHHHHHHhc---CC-CcEEEEccchhhHHHHhCcCCCCeEEeCCCCCCCccEEEcCCeEEEcccccHHHHHH
Q 000805 178 KWYRPLKLQHLLELKSK---YP-DSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELLK 253 (1276)
Q Consensus 178 ~~~~P~sl~eal~ll~~---~~-~a~lvaGgTdl~v~~~~~~~~~~~lIdl~~i~EL~~I~~~~~~l~IGA~vTl~~l~~ 253 (1276)
-+++|+|.+|+.++++. +. ..++.+||+...- ........+||++++...-.+..++..++++|++++.||.+
T Consensus 3 ~vv~P~s~~ev~~~v~~a~~~~~~v~~~g~G~~~~~---~~~~~~~ivi~~~~l~~i~~id~~~~~v~v~aG~~~~~l~~ 79 (139)
T PF01565_consen 3 AVVRPKSVEEVQAIVKFANENGVPVRVRGGGHSWTG---QSSDEGGIVIDMSRLNKIIEIDPENGTVTVGAGVTWGDLYE 79 (139)
T ss_dssp EEEEESSHHHHHHHHHHHHHTTSEEEEESSSTTSSS---TTSSTTEEEEECTTCGCEEEEETTTTEEEEETTSBHHHHHH
T ss_pred EEEEeCCHHHHHHHHHHHHHcCCcEEEEcCCCCccc---ccccCCcEEEeeccccccccccccceeEEEeccccchhccc
Confidence 47899999999887753 22 4677888888863 22234568999987554333444578999999999999999
Q ss_pred HhhhhhhcCCccchhhHHHHHHHHHhhc-CcccceeeeecccccccCC
Q 000805 254 MFRKVVTERPAHETSSCKAFIEQIKWFA-GTQIKNVASVGGNICTASP 300 (1276)
Q Consensus 254 ~l~~~~~~~~~~~~~~~~~L~~~~~~ia-s~qIRN~aTiGGNi~~asp 300 (1276)
.+.+.-.. +. .+.--.-+|+||.|++...
T Consensus 80 ~l~~~g~~------------------~~~~~~~~~~~tvGG~i~~~~~ 109 (139)
T PF01565_consen 80 ALAPRGLM------------------LPVEPGSGIPGTVGGAIAGNGH 109 (139)
T ss_dssp HHHHHTEE------------------ESSGGGSTTTSBHHHHHHTT-E
T ss_pred cccccccc------------------ccccccccccceEchhhcCCCc
Confidence 86432111 11 1333445799999987643
No 41
>COG0277 GlcD FAD/FMN-containing dehydrogenases [Energy production and conversion]
Probab=95.65 E-value=0.018 Score=70.86 Aligned_cols=103 Identities=17% Similarity=0.157 Sum_probs=75.2
Q ss_pred eEEEecCCHHHHHHHHhcC--CC--cEEEEccchhhHHHHhCcCCCCeEEeCCCCCCCccEEEcCCeEEEcccccHHHHH
Q 000805 177 LKWYRPLKLQHLLELKSKY--PD--SKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELL 252 (1276)
Q Consensus 177 ~~~~~P~sl~eal~ll~~~--~~--a~lvaGgTdl~v~~~~~~~~~~~lIdl~~i~EL~~I~~~~~~l~IGA~vTl~~l~ 252 (1276)
..+.+|+|.+|+.++++.- .+ ..+.+|||++.-...-. ..++||++++..+..|..++..+++.+++++.+|.
T Consensus 33 ~~v~~p~s~~eV~~iv~~a~~~~~~v~prG~gts~~g~~~~~---~gvvl~l~~mn~i~~id~~~~~~~v~aGv~l~~l~ 109 (459)
T COG0277 33 LAVVFPKSEEEVAAILRLANENGIPVVPRGGGTSLSGGAVPD---GGVVLDLSRLNRILEIDPEDGTATVQAGVTLEDLE 109 (459)
T ss_pred CEEEccCCHHHHHHHHHHHHHcCCeEEEECCCCCccccccCC---CcEEEEchhhcchhccCcCCCEEEEcCCccHHHHH
Confidence 3688999999999887542 12 66779999985421111 16899999966555556668899999999999999
Q ss_pred HHhhhhhhcCCccchhhHHHHHHHHHhhcCcccceeeeecccccccC
Q 000805 253 KMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTAS 299 (1276)
Q Consensus 253 ~~l~~~~~~~~~~~~~~~~~L~~~~~~ias~qIRN~aTiGGNi~~as 299 (1276)
+.+++.--.++ ..|+.++.+||||||++.+
T Consensus 110 ~~l~~~G~~~p-----------------~~p~s~~~~tIGG~ia~~~ 139 (459)
T COG0277 110 KALAPHGLFLP-----------------VDPSSSGTATIGGNIATNA 139 (459)
T ss_pred HHHHHcCCccC-----------------CCccccccceEccchhcCC
Confidence 98754322111 3567779999999999864
No 42
>PRK12436 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=95.62 E-value=0.071 Score=61.95 Aligned_cols=152 Identities=17% Similarity=0.264 Sum_probs=98.6
Q ss_pred CeEEEecCCHHHHHHHHh---cCC-CcEEEEccchhhHHHHhCcCCCCeEEeCCCCCCCccEEEcCCeEEEcccccHHHH
Q 000805 176 GLKWYRPLKLQHLLELKS---KYP-DSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTEL 251 (1276)
Q Consensus 176 ~~~~~~P~sl~eal~ll~---~~~-~a~lvaGgTdl~v~~~~~~~~~~~lIdl~~i~EL~~I~~~~~~l~IGA~vTl~~l 251 (1276)
-.-++.|.|.+|+.++++ ++. ...++.|||.+.+. .+. ....+|++++ |+.|+.+++.+++||++++.+|
T Consensus 37 a~~vv~p~~~edv~~~l~~a~~~~ip~~v~GgGSNll~~--d~g-~~GvvI~l~~---l~~i~~~~~~v~v~aG~~~~~L 110 (305)
T PRK12436 37 ADVFVAPTNYDEIQEVIKYANKYNIPVTFLGNGSNVIIK--DGG-IRGITVSLIH---ITGVTVTGTTIVAQCGAAIIDV 110 (305)
T ss_pred EEEEEecCCHHHHHHHHHHHHHcCCCEEEEcCCeEEEEe--CCC-eeEEEEEeCC---cCcEEEeCCEEEEEeCCcHHHH
Confidence 446889999999988774 222 37889999999742 221 2357899875 5567777889999999999999
Q ss_pred HHHhhhhhhcCCccchhhHHHHHHHHHhhcCcccceeeeeccccccc-CCCC-CHHHHHHHcCCEEEEEeCCCcEEEEEh
Q 000805 252 LKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTA-SPIS-DLNPLWMASGAKFHIVDCKGNIRTTMA 329 (1276)
Q Consensus 252 ~~~l~~~~~~~~~~~~~~~~~L~~~~~~ias~qIRN~aTiGGNi~~a-sp~s-D~~p~Llal~A~v~l~s~~g~~R~vpl 329 (1276)
.+.+.+. .+. .| ...++ --|||||++.+- .-.+ ++.= .+ ..+++...+|+.++++-
T Consensus 111 ~~~~~~~--gl~--------Gl----e~~~g----iPGtVGGav~~NAGayG~~~~d---vl-~~v~vv~~~G~v~~~~~ 168 (305)
T PRK12436 111 SRIALDH--NLT--------GL----EFACG----IPGSVGGALYMNAGAYGGEISF---VL-TEAVVMTGDGELRTLTK 168 (305)
T ss_pred HHHHHHc--CCc--------cc----hhhcC----CccchhHHHHhcCccchhehhe---ee-eEEEEEeCCCCEEEEEH
Confidence 8875321 110 01 11121 237899999743 3222 1100 01 12344455676888999
Q ss_pred HhHhccCccccCCCc-eEEEEEEccCC
Q 000805 330 EEFFLGYRKVDLTSG-EILLSIFLPWT 355 (1276)
Q Consensus 330 ~~F~~g~~~t~L~~~-Eii~~I~iP~~ 355 (1276)
+|..-+||...++.+ .||+++.+-..
T Consensus 169 ~e~~f~YR~s~~~~~~~iil~a~~~l~ 195 (305)
T PRK12436 169 EAFEFGYRKSVFANNHYIILEARFELE 195 (305)
T ss_pred HHhcCcCCCCcCCCCCEEEEEEEEEEc
Confidence 998889999888764 37777776654
No 43
>PRK11183 D-lactate dehydrogenase; Provisional
Probab=95.24 E-value=0.044 Score=66.97 Aligned_cols=106 Identities=23% Similarity=0.183 Sum_probs=68.4
Q ss_pred eEEEecCCHHHHHHHHh---cCC-CcEEEEccchhhH-HHHhC--cCCCCeEEeCCCCCCCccEEEcCCeEEEcccccHH
Q 000805 177 LKWYRPLKLQHLLELKS---KYP-DSKLLVGNTEVGI-EMRLK--RMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLT 249 (1276)
Q Consensus 177 ~~~~~P~sl~eal~ll~---~~~-~a~lvaGgTdl~v-~~~~~--~~~~~~lIdl~~i~EL~~I~~~~~~l~IGA~vTl~ 249 (1276)
.-.++|.|.+|..++++ ++. -...-+|||+|.= ..-.+ .....++||+.++..+..|. ++..+...++||+.
T Consensus 40 ~AVV~P~SteEVa~IVklC~e~~vPVIPRGgGTGLtGGAvP~~~~~dR~gVVIsl~RMNrIleID-~~~~VvVePGVtl~ 118 (564)
T PRK11183 40 LAVVFPGTLLELWRVLQACVAADKIIIMQAANTGLTGGSTPNGNDYDRDIVIISTLRLDKIQLLN-NGKQVLALPGTTLY 118 (564)
T ss_pred CEEEecCCHHHHHHHHHHHHHcCCeEEEeCCCcccccCcccCCCCCcCCEEEEEhhHcCCcEEEC-CCCeEEEeCCCcHH
Confidence 45789999999998775 332 2445589998831 11110 01124799998866665555 45689999999999
Q ss_pred HHHHHhhhhhhcCCccchhhHHHHHHHHHhhcCcccceeeeecccccccC
Q 000805 250 ELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTAS 299 (1276)
Q Consensus 250 ~l~~~l~~~~~~~~~~~~~~~~~L~~~~~~ias~qIRN~aTiGGNi~~as 299 (1276)
+|.+.+++.-.. ++ ..++|.+|- +||||||++.+
T Consensus 119 ~LeeaLk~~Gl~-p~-------------sd~GSS~IG--asIGGnIAtNA 152 (564)
T PRK11183 119 QLEKALKPLGRE-PH-------------SVIGSSCIG--ASVIGGICNNS 152 (564)
T ss_pred HHHHHHHHhCCC-CC-------------CcccccccC--CCCccceEECC
Confidence 999987553211 11 012444443 39999999763
No 44
>TIGR00387 glcD glycolate oxidase, subunit GlcD. This protein, the glycolate oxidase GlcD subunit, is similar in sequence to that of several D-lactate dehydrogenases, including that of E. coli. The glycolate oxidase has been found to have some D-lactate dehydrogenase activity.
Probab=94.83 E-value=0.14 Score=62.17 Aligned_cols=100 Identities=13% Similarity=0.095 Sum_probs=65.4
Q ss_pred EecCCHHHHHHHHh---cCC-CcEEEEccchhhHHHHhCcCCCCeEEeCCCCCCCccEEEcCCeEEEcccccHHHHHHHh
Q 000805 180 YRPLKLQHLLELKS---KYP-DSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELLKMF 255 (1276)
Q Consensus 180 ~~P~sl~eal~ll~---~~~-~a~lvaGgTdl~v~~~~~~~~~~~lIdl~~i~EL~~I~~~~~~l~IGA~vTl~~l~~~l 255 (1276)
++|.|.+|+.++++ ++. ...+.+|||.+.-.. -......+||++++...-.|..++..++++|++++.+|.+.+
T Consensus 2 v~P~s~eev~~iv~~a~~~~i~v~~~G~Gt~~~g~~--~~~~~~vvidl~~mn~i~~id~~~~~v~veaGv~~~~l~~~l 79 (413)
T TIGR00387 2 VFPKNTEQVARILKLCHEHRIPIVPRGAGTGLSGGA--LPEEGGLVLVFKHMNKILEIDVVNLTAVVQPGVRNLELEQAV 79 (413)
T ss_pred CCCCCHHHHHHHHHHHHHcCCcEEEECCCCCCCCCc--cCCCCeEEEEhHHcCceeEEcCCCCEEEEcCCccHHHHHHHH
Confidence 47999999888775 332 477889999874100 001235788987744333334446789999999999999986
Q ss_pred hhhhhcCCccchhhHHHHHHHHHhhcCcccceeeeeccccccc
Q 000805 256 RKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTA 298 (1276)
Q Consensus 256 ~~~~~~~~~~~~~~~~~L~~~~~~ias~qIRN~aTiGGNi~~a 298 (1276)
.+.--.++ -.++-...+||||+|++.
T Consensus 80 ~~~gl~~~-----------------~~p~s~~~~tiGG~ia~n 105 (413)
T TIGR00387 80 EEHNLFYP-----------------PDPSSQISSTIGGNIAEN 105 (413)
T ss_pred HHcCCeeC-----------------CCCcccccceehhhhhcC
Confidence 54211111 134445579999999864
No 45
>TIGR01676 GLDHase galactonolactone dehydrogenase. This model represents L-Galactono-gamma-lactone dehydrogenase (EC 1.3.2.3). This enzyme catalyzes the final step in ascorbic acid biosynthesis in higher plants. This protein is homologous to ascorbic acid biosynthesis enzymes of other species: L-gulono-gamma-lactone oxidase in rat and L-galactono-gamma-lactone oxidase in yeast. All three covalently bind the cofactor FAD.
Probab=94.75 E-value=0.052 Score=67.11 Aligned_cols=101 Identities=8% Similarity=0.133 Sum_probs=70.6
Q ss_pred eEEEecCCHHHHHHHHhcC---C-CcEEEEccchhhHHHHhCcCCCCeEEeCCCCCCCccEEEcCCeEEEcccccHHHHH
Q 000805 177 LKWYRPLKLQHLLELKSKY---P-DSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELL 252 (1276)
Q Consensus 177 ~~~~~P~sl~eal~ll~~~---~-~a~lvaGgTdl~v~~~~~~~~~~~lIdl~~i~EL~~I~~~~~~l~IGA~vTl~~l~ 252 (1276)
..+++|+|.+|+.++++.. . ..++++||++..-. ......+||++++..+-.|..+...++++|++++.+|.
T Consensus 63 ~~~~~P~s~eEV~~iV~~A~~~g~~Vr~~GsGhS~sg~----a~t~g~lldL~~ln~Vl~vD~~~~tVtV~AG~~l~~L~ 138 (541)
T TIGR01676 63 RTFHQPEAIEELEGIVKQANEKKARIRPVGSGLSPNGI----GLSRAGMVNLALMDKVLEVDEEKKRVRVQAGIRVQQLV 138 (541)
T ss_pred ceEECCCCHHHHHHHHHHHHHcCCcEEEECCCcCCCCc----ccCCCeEEEhhhCCCCEEEcCCCCEEEEcCCCCHHHHH
Confidence 4689999999999988643 2 47888888876321 11224689999877666666667889999999999999
Q ss_pred HHhhhhhhcCCccchhhHHHHHHHHHhhcCcccceeeeecccccccC
Q 000805 253 KMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTAS 299 (1276)
Q Consensus 253 ~~l~~~~~~~~~~~~~~~~~L~~~~~~ias~qIRN~aTiGGNi~~as 299 (1276)
+.|.+.-- + +.+..--+..||||+|+++.
T Consensus 139 ~~L~~~Gl---------------a---l~n~gsi~~~TIGGaiatgt 167 (541)
T TIGR01676 139 DAIKEYGI---------------T---LQNFASIREQQIGGIIQVGA 167 (541)
T ss_pred HHHHHcCC---------------E---eccCCCCCCceEccccccCC
Confidence 87643210 1 12222235689999999863
No 46
>PRK00046 murB UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=94.73 E-value=0.19 Score=58.89 Aligned_cols=155 Identities=16% Similarity=0.151 Sum_probs=98.0
Q ss_pred CCcccccCCCeEEEecCCHHHHHHHHhcC----CCcEEEEccchhhHHHHhCcCCCCeEEeCCCCCCCccEEE---cCC-
Q 000805 167 NPLNLSGFGGLKWYRPLKLQHLLELKSKY----PDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNV---KDD- 238 (1276)
Q Consensus 167 ~~~~~~~~~~~~~~~P~sl~eal~ll~~~----~~a~lvaGgTdl~v~~~~~~~~~~~lIdl~~i~EL~~I~~---~~~- 238 (1276)
.++.+ |..-..|+.|.|.+|+.++++.. -...+|.||+-+++. . ..+..+|.+ + ++.++. +++
T Consensus 13 tt~ri-GG~A~~~~~p~~~~el~~~~~~~~~~~~p~~vlG~GSNlLv~--D--~~~g~vI~~-~---~~~~~~~~~~~~~ 83 (334)
T PRK00046 13 NTFGI-DARARHLVEAESEEQLLEALADARAAGLPVLVLGGGSNVLFT--E--DFDGTVLLN-R---IKGIEVLSEDDDA 83 (334)
T ss_pred ceecc-CcEEeEEEeeCCHHHHHHHHHHHHHcCCCEEEEeceEEEEEC--C--CCCEEEEEe-c---CCceEEEecCCCe
Confidence 34556 55455788999999999988632 137889999999883 2 234566765 3 445554 433
Q ss_pred -eEEEcccccHHHHHHHhhhhhhcCCccchhhHHHHHHHHHhhcCcccceeeeecccccc-cCC----CCCHHHHHHHcC
Q 000805 239 -GLEIGAAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICT-ASP----ISDLNPLWMASG 312 (1276)
Q Consensus 239 -~l~IGA~vTl~~l~~~l~~~~~~~~~~~~~~~~~L~~~~~~ias~qIRN~aTiGGNi~~-asp----~sD~~p~Llal~ 312 (1276)
.+++||++.+.+|.....+ ..+ .. +.++++.+ ||+||-+.+ +.- ++|.+
T Consensus 84 ~~v~a~AG~~~~~l~~~~~~--~gl--------~G----lE~l~gIP----GTVGGAv~mNaGayG~ei~d~l------- 138 (334)
T PRK00046 84 WYLHVGAGENWHDLVLWTLQ--QGM--------PG----LENLALIP----GTVGAAPIQNIGAYGVELKDVC------- 138 (334)
T ss_pred EEEEEEcCCcHHHHHHHHHH--cCc--------hh----hHHhcCCC----cchhHHHHhcCCcCcccHheeE-------
Confidence 6999999999999987422 111 12 23344443 666666642 221 23322
Q ss_pred CEEEEEeCC-CcEEEEEhHhHhccCccccCCCc----eEEEEEEccCC
Q 000805 313 AKFHIVDCK-GNIRTTMAEEFFLGYRKVDLTSG----EILLSIFLPWT 355 (1276)
Q Consensus 313 A~v~l~s~~-g~~R~vpl~~F~~g~~~t~L~~~----Eii~~I~iP~~ 355 (1276)
-+|++...+ |+.++++-+|..-+||...++.+ .+|+++.+-..
T Consensus 139 ~~V~v~d~~~g~~~~~~~~e~~f~YR~S~f~~~~~~~~iVl~a~f~L~ 186 (334)
T PRK00046 139 DYVEALDLATGEFVRLSAAECRFGYRDSIFKHEYPDRYAITAVGFRLP 186 (334)
T ss_pred EEEEEEECCCCcEEEEEHHHcCcccccccCCCCCcCCEEEEEEEEEec
Confidence 245666554 65888999998889998887643 46666665543
No 47
>PRK13903 murB UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=94.42 E-value=0.17 Score=59.98 Aligned_cols=143 Identities=15% Similarity=0.173 Sum_probs=87.2
Q ss_pred CCcccccCCCeEEEecCCHHHHHHHHhc---C-CCcEEEEccchhhHHHHhCcCCCCeEEeCCCCCCCccEEEc--CCeE
Q 000805 167 NPLNLSGFGGLKWYRPLKLQHLLELKSK---Y-PDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVK--DDGL 240 (1276)
Q Consensus 167 ~~~~~~~~~~~~~~~P~sl~eal~ll~~---~-~~a~lvaGgTdl~v~~~~~~~~~~~lIdl~~i~EL~~I~~~--~~~l 240 (1276)
.++.+ +..-..|+.|.|.+|+.++++. + -...++.||+-+++. . ...+..+|+++. +.|+.+ ++.+
T Consensus 25 tt~~i-Gg~A~~~~~p~s~edl~~~l~~a~~~~~p~~vlGgGSNlLv~--D-~g~~GvVI~l~~----~~i~i~~~~~~v 96 (363)
T PRK13903 25 TTLRV-GGPARRLVTCTSTEELVAAVRELDAAGEPLLVLGGGSNLVIA--D-DGFDGTVVRVAT----RGVTVDCGGGLV 96 (363)
T ss_pred cEeec-CccceEEEEeCCHHHHHHHHHHHHHCCCCEEEEeCCeeEeEC--C-CCccEEEEEeCC----CcEEEeCCCCEE
Confidence 45666 5445568899999999988753 2 247899999998751 2 113457898863 556655 6789
Q ss_pred EEcccccHHHHHHHhhhhhhcCCccchhhHHHHHHHHHhhcCcccceeeeecccccccCC-----CCCHHHHHHHcCCEE
Q 000805 241 EIGAAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASP-----ISDLNPLWMASGAKF 315 (1276)
Q Consensus 241 ~IGA~vTl~~l~~~l~~~~~~~~~~~~~~~~~L~~~~~~ias~qIRN~aTiGGNi~~asp-----~sD~~p~Llal~A~v 315 (1276)
++||++++.++...+.+. .+. . +...+..+ ||+||-+.+-.- ++|.+ -.|
T Consensus 97 ~vgAG~~~~~l~~~a~~~--GL~--------G----lE~laGIP----GTVGGAv~mNaGayG~ei~D~l-------~sV 151 (363)
T PRK13903 97 RAEAGAVWDDVVARTVEA--GLG--------G----LECLSGIP----GSAGATPVQNVGAYGQEVSDTI-------TRV 151 (363)
T ss_pred EEEcCCCHHHHHHHHHHc--CCc--------c----ccccCCCC----cchhhHhhcCCChhHHHHhhhE-------eEE
Confidence 999999999999874221 111 0 11122222 566666543211 23322 124
Q ss_pred EEEeCC-CcEEEEEhHhHhccCccccCC
Q 000805 316 HIVDCK-GNIRTTMAEEFFLGYRKVDLT 342 (1276)
Q Consensus 316 ~l~s~~-g~~R~vpl~~F~~g~~~t~L~ 342 (1276)
++...+ |+.++++-+|.+-+||...++
T Consensus 152 ~vvd~~~G~~~~~~~~el~f~YR~S~f~ 179 (363)
T PRK13903 152 RLLDRRTGEVRWVPAADLGFGYRTSVLK 179 (363)
T ss_pred EEEECCCCEEEEEEHHHcceeccccccC
Confidence 444433 546777888877778776654
No 48
>TIGR01678 FAD_lactone_ox sugar 1,4-lactone oxidases. This model represents a family of at least two different sugar 1,4 lactone oxidases, both involved in synthesizing ascorbic acid or a derivative. These include L-gulonolactone oxidase (EC 1.1.3.8) from rat and D-arabinono-1,4-lactone oxidase (EC 1.1.3.37) from Saccharomyces cerevisiae. Members are proposed to have the cofactor FAD covalently bound at a site specified by Prosite motif PS00862; OX2_COVAL_FAD; 1.
Probab=94.36 E-value=0.1 Score=63.66 Aligned_cols=102 Identities=16% Similarity=0.210 Sum_probs=66.8
Q ss_pred eEEEecCCHHHHHHHHhcC---C-CcEEEEccchhhHHHHhCcCCCCeEEeCCCCCCCccEEEcCCeEEEcccccHHHHH
Q 000805 177 LKWYRPLKLQHLLELKSKY---P-DSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELL 252 (1276)
Q Consensus 177 ~~~~~P~sl~eal~ll~~~---~-~a~lvaGgTdl~v~~~~~~~~~~~lIdl~~i~EL~~I~~~~~~l~IGA~vTl~~l~ 252 (1276)
...++|+|.+|+.++++.- . ..++++||++..-. ......+||++++..+-.|..+.+.++++|++++.+|.
T Consensus 16 ~~v~~P~s~eev~~iv~~A~~~~~~v~v~G~GhS~s~~----~~~~gvvIdl~~l~~i~~id~~~~~vtV~aG~~l~~L~ 91 (438)
T TIGR01678 16 EVYYQPTSVEEVREVLALAREQKKKVKVVGGGHSPSDI----ACTDGFLIHLDKMNKVLQFDKEKKQITVEAGIRLYQLH 91 (438)
T ss_pred CEEEecCCHHHHHHHHHHHHHCCCeEEEECCCCCCCCC----ccCCeEEEEhhhcCCceEEcCCCCEEEEcCCCCHHHHH
Confidence 3689999999999887632 2 47788888554210 11235899998865544444445689999999999999
Q ss_pred HHhhhhhhcCCccchhhHHHHHHHHHhhcCcccceeeeecccccccCC
Q 000805 253 KMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASP 300 (1276)
Q Consensus 253 ~~l~~~~~~~~~~~~~~~~~L~~~~~~ias~qIRN~aTiGGNi~~asp 300 (1276)
+.|.+.- + ++...++. +..||||.|.++..
T Consensus 92 ~~L~~~G--l-------------~l~~~g~~---~~~TvGG~iatg~h 121 (438)
T TIGR01678 92 EQLDEHG--Y-------------SMSNLGSI---SEVSVAGIISTGTH 121 (438)
T ss_pred HHHHHcC--C-------------EecCCCCC---CCceeeehhcCCCC
Confidence 8764321 0 01112222 45899998877643
No 49
>PRK14649 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=94.34 E-value=0.21 Score=57.75 Aligned_cols=161 Identities=12% Similarity=0.151 Sum_probs=99.3
Q ss_pred CCcccccCCCeEEEecCCHHHHHHHHhc---CC-CcEEEEccchhhHHHHhCcCCCCeEEeCCCCCCCccEEEcCC--eE
Q 000805 167 NPLNLSGFGGLKWYRPLKLQHLLELKSK---YP-DSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDD--GL 240 (1276)
Q Consensus 167 ~~~~~~~~~~~~~~~P~sl~eal~ll~~---~~-~a~lvaGgTdl~v~~~~~~~~~~~lIdl~~i~EL~~I~~~~~--~l 240 (1276)
.++.+ |..-..|+.|+|.+|+.++++. +. ...++.||+-+.+. .......+|+++.- .+ .+..+++ .+
T Consensus 13 tt~~i-Gg~a~~~v~p~~~~dl~~~l~~~~~~~ip~~vlG~GSNlL~~---d~g~~GvVI~l~~~-~~-~i~~~~~~~~v 86 (295)
T PRK14649 13 TSWRI-GGPARYFVEPTTPDEAIAAAAWAEQRQLPLFWLGGGSNLLVR---DEGFDGLVARYRGQ-RW-ELHEHGDTAEV 86 (295)
T ss_pred cEeee-CceeeEEEEcCCHHHHHHHHHHHHHCCCCEEEEecceeEEEe---CCCcCeEEEEecCC-Cc-EEEEeCCcEEE
Confidence 34556 5545678889999999988752 22 47889999998762 22234578888642 24 4555555 79
Q ss_pred EEcccccHHHHHHHhhhhhhcCCccchhhHHHHHHHHHhhcCcccceeeeecccc-cccCCC-CCHHHHHHHcCCEEEEE
Q 000805 241 EIGAAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNI-CTASPI-SDLNPLWMASGAKFHIV 318 (1276)
Q Consensus 241 ~IGA~vTl~~l~~~l~~~~~~~~~~~~~~~~~L~~~~~~ias~qIRN~aTiGGNi-~~asp~-sD~~p~Llal~A~v~l~ 318 (1276)
++||++++.++...+.+. .+. .| ...+..+ ||+||-+ +|+.-. .++.=.|. +|++.
T Consensus 87 ~v~AG~~~~~l~~~~~~~--GL~--------Gl----E~l~GIP----GTvGGa~~mNaGayg~ei~d~l~----~V~~~ 144 (295)
T PRK14649 87 WVEAGAPMAGTARRLAAQ--GWA--------GL----EWAEGLP----GTIGGAIYGNAGCYGGDTATVLI----RAWLL 144 (295)
T ss_pred EEEcCCcHHHHHHHHHHc--CCc--------cc----cccCCCC----cchhHHHHhhccccceEhheeEE----EEEEE
Confidence 999999999999874321 111 11 1223332 5778733 444322 12221221 24555
Q ss_pred eCCCcEEEEEhHhHhccCccccCCC---------ceEEEEEEccCC
Q 000805 319 DCKGNIRTTMAEEFFLGYRKVDLTS---------GEILLSIFLPWT 355 (1276)
Q Consensus 319 s~~g~~R~vpl~~F~~g~~~t~L~~---------~Eii~~I~iP~~ 355 (1276)
..+|+.++++-+|.+-|||...++. +.+|+++.+-..
T Consensus 145 ~~~g~~~~~~~~el~f~YR~S~~~~~~~~~~~~~~~ii~~~~~~l~ 190 (295)
T PRK14649 145 LNGSECVEWSVHDFAYGYRTSVLKQLRADGITWRPPLVLAARFRLH 190 (295)
T ss_pred eCCCCEEEEeHHHcCcccceeecccccccccccCCeEEEEEEEEEC
Confidence 5566588899999888999887765 347777765443
No 50
>COG0812 MurB UDP-N-acetylmuramate dehydrogenase [Cell envelope biogenesis, outer membrane]
Probab=94.24 E-value=0.38 Score=54.84 Aligned_cols=163 Identities=20% Similarity=0.246 Sum_probs=105.6
Q ss_pred CcccccCCCeEEEecCCHHHHHHHHhcCC----CcEEEEccchhhHHHHhCcCCCCeEEeCCCCCCCccEEE--cCCeEE
Q 000805 168 PLNLSGFGGLKWYRPLKLQHLLELKSKYP----DSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNV--KDDGLE 241 (1276)
Q Consensus 168 ~~~~~~~~~~~~~~P~sl~eal~ll~~~~----~a~lvaGgTdl~v~~~~~~~~~~~lIdl~~i~EL~~I~~--~~~~l~ 241 (1276)
++.+ |..-..|+.|.+.+|+.++++..+ ...++.||+-+++. .+. ....+|.+.. +..+.. +++.|+
T Consensus 14 tfri-Gg~A~~~~~~~~~e~l~~~~~~~~~~~~p~~ilG~GSNlLv~--d~g-~~gvvi~~~~---~~~~~~~~~~~~i~ 86 (291)
T COG0812 14 TFRI-GGPAEVLVEPRDIEELKAALKYAKAEDLPVLILGGGSNLLVR--DGG-IGGVVIKLGK---LNFIEIEGDDGLIE 86 (291)
T ss_pred eEec-CcceeEEEecCCHHHHHHHHHhhhhcCCCEEEEecCceEEEe--cCC-CceEEEEccc---ccceeeeccCCeEE
Confidence 3455 554568999999999988875432 47889999988772 222 2345555544 434443 444999
Q ss_pred EcccccHHHHHHHhhhhhhcCCccchhhHHHHHHHHHhhcCcccceeeeecccccccCCCCCHHHHHHHcCCEEEEEeCC
Q 000805 242 IGAAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPLWMASGAKFHIVDCK 321 (1276)
Q Consensus 242 IGA~vTl~~l~~~l~~~~~~~~~~~~~~~~~L~~~~~~ias~qIRN~aTiGGNi~~asp~sD~~p~Llal~A~v~l~s~~ 321 (1276)
+||+..+.+|.....+ ..++ -+.-++--=..+|+-.+-|.|+-|+. ++|.+. +|++...+
T Consensus 87 a~aG~~~~~l~~~~~~--~gl~-----GlE~l~gIPGsvGgav~mNaGAyG~E------i~d~~~-------~v~~ld~~ 146 (291)
T COG0812 87 AGAGAPWHDLVRFALE--NGLS-----GLEFLAGIPGSVGGAVIMNAGAYGVE------ISDVLV-------SVEVLDRD 146 (291)
T ss_pred EccCCcHHHHHHHHHH--cCCc-----chhhhcCCCcccchhhhccCcccccc------hheeEE-------EEEEEcCC
Confidence 9999999999886422 1111 01111111123555555666555554 344332 46666667
Q ss_pred CcEEEEEhHhHhccCccccCCCc-eEEEEEEccCCCC
Q 000805 322 GNIRTTMAEEFFLGYRKVDLTSG-EILLSIFLPWTRP 357 (1276)
Q Consensus 322 g~~R~vpl~~F~~g~~~t~L~~~-Eii~~I~iP~~~~ 357 (1276)
|+.++++-+|.--|||...++.. -+|+++.+-..+.
T Consensus 147 G~~~~l~~~el~f~YR~S~f~~~~~vvl~v~f~L~~~ 183 (291)
T COG0812 147 GEVRWLSAEELGFGYRTSPFKKEYLVVLSVEFKLTKG 183 (291)
T ss_pred CCEEEEEHHHhCcccccCcCCCCCEEEEEEEEEeCCC
Confidence 87899999998889999999877 7899988877643
No 51
>PLN02465 L-galactono-1,4-lactone dehydrogenase
Probab=94.15 E-value=0.21 Score=62.49 Aligned_cols=102 Identities=10% Similarity=0.186 Sum_probs=66.2
Q ss_pred CeEEEecCCHHHHHHHHhcC---C-CcEEEEccchhhHHHHhCcCCCCeEEeCCCCCCCccEEEcCCeEEEcccccHHHH
Q 000805 176 GLKWYRPLKLQHLLELKSKY---P-DSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTEL 251 (1276)
Q Consensus 176 ~~~~~~P~sl~eal~ll~~~---~-~a~lvaGgTdl~v~~~~~~~~~~~lIdl~~i~EL~~I~~~~~~l~IGA~vTl~~l 251 (1276)
...+++|+|.+|+.++++.. . ..+++++|.+..-. ......+||++++..+-.|..+...++++|++++.+|
T Consensus 97 p~~vv~P~S~eEV~~iV~~A~~~g~~VrvvGsGhS~~~l----~~td~glIdL~~l~~Il~vD~e~~~VtV~AG~~l~~L 172 (573)
T PLN02465 97 TRRYHQPESLEELEDIVKEAHEKGRRIRPVGSGLSPNGL----AFSREGMVNLALMDKVLEVDKEKKRVTVQAGARVQQV 172 (573)
T ss_pred CCEEEEeCCHHHHHHHHHHHHHcCCcEEEEcCCcCCCCe----eeCCCEEEECcCCCCcEEEeCCCCEEEEccCCCHHHH
Confidence 34689999999999888642 2 47888888743211 1123458998875544334444568999999999999
Q ss_pred HHHhhhhhhcCCccchhhHHHHHHHHHhhcCcccceeeeecccccccC
Q 000805 252 LKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTAS 299 (1276)
Q Consensus 252 ~~~l~~~~~~~~~~~~~~~~~L~~~~~~ias~qIRN~aTiGGNi~~as 299 (1276)
.+.+.+.- | ++...++. +.+||||.|.++.
T Consensus 173 ~~~L~~~G-------------L--al~n~g~I---~~~TIGGaIstGt 202 (573)
T PLN02465 173 VEALRPHG-------------L--TLQNYASI---REQQIGGFIQVGA 202 (573)
T ss_pred HHHHHHcC-------------C--EeccCCCC---CCeeecchhhCCC
Confidence 98764321 0 01122322 4679999997764
No 52
>PRK11230 glycolate oxidase subunit GlcD; Provisional
Probab=93.71 E-value=0.15 Score=63.38 Aligned_cols=102 Identities=12% Similarity=0.071 Sum_probs=69.3
Q ss_pred EEEecCCHHHHHHHHh---cCC-CcEEEEccchhhHHHHhCcCCCCeEEeCCCCCCCccEEEcCCeEEEcccccHHHHHH
Q 000805 178 KWYRPLKLQHLLELKS---KYP-DSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELLK 253 (1276)
Q Consensus 178 ~~~~P~sl~eal~ll~---~~~-~a~lvaGgTdl~v~~~~~~~~~~~lIdl~~i~EL~~I~~~~~~l~IGA~vTl~~l~~ 253 (1276)
-.++|.|.+|+.++++ ++. ...+.+|||.+.-. .-......+||++++..+..|..++..++++|++|+.+|.+
T Consensus 58 ~Vv~P~s~eeV~~iv~~a~~~~ipv~~rG~Gt~~~gg--~~~~~~gividl~~ln~I~~id~~~~~v~VeaGv~~~~L~~ 135 (499)
T PRK11230 58 LVVLPKQMEQVQALLAVCHRLRVPVVARGAGTGLSGG--ALPLEKGVLLVMARFNRILDINPVGRRARVQPGVRNLAISQ 135 (499)
T ss_pred EEEeeCCHHHHHHHHHHHHHcCCeEEEECCCcCcCCC--cccCCCcEEEEcccCCCceEEcCCCCEEEEcCCccHHHHHH
Confidence 5789999999988775 332 24567888887211 00112358999998665555555668899999999999998
Q ss_pred HhhhhhhcCCccchhhHHHHHHHHHhhcCcccceeeeeccccccc
Q 000805 254 MFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTA 298 (1276)
Q Consensus 254 ~l~~~~~~~~~~~~~~~~~L~~~~~~ias~qIRN~aTiGGNi~~a 298 (1276)
.+.+.-..+ ...+.-...+||||||++.
T Consensus 136 ~l~~~Gl~~-----------------~~~p~s~~~~tvGG~ia~n 163 (499)
T PRK11230 136 AAAPHGLYY-----------------APDPSSQIACSIGGNVAEN 163 (499)
T ss_pred HHHHcCCee-----------------CCCCCccccceEcceeccC
Confidence 865421111 1234445679999999864
No 53
>PRK14651 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=93.37 E-value=0.5 Score=53.83 Aligned_cols=155 Identities=18% Similarity=0.280 Sum_probs=99.2
Q ss_pred CCcccccCCCeEEEecCCHHHHHHHHhcCCCcEEEEccchhhHHHHhCcCCCCeEEeCCCCCCCccEEEcCCeEEEcccc
Q 000805 167 NPLNLSGFGGLKWYRPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAV 246 (1276)
Q Consensus 167 ~~~~~~~~~~~~~~~P~sl~eal~ll~~~~~a~lvaGgTdl~v~~~~~~~~~~~lIdl~~i~EL~~I~~~~~~l~IGA~v 246 (1276)
.++.+ |. .-+|+.|.|.+|+.+++. -...++.||+-+++. ..-.+..+|-+++ .+..++.++ +.||++
T Consensus 13 tt~ri-GG-~A~~~~p~~~~~l~~~~~--~p~~vlG~GSNlL~~---D~g~~g~vI~l~~--~~~~~~~~~---~a~AG~ 80 (273)
T PRK14651 13 TTLGV-GG-PAELWTVETHEQLAEATE--APYRVLGGGSNLLVS---DAGVPERVIRLGG--EFAEWDLDG---WVGGGV 80 (273)
T ss_pred cEeec-Cc-eEEEEecCCHHHHHHHHC--CCeEEEeceeEEEEc---CCCcceEEEEECC--cceeEeECC---EEECCC
Confidence 34555 54 344444999999999984 258899999999872 2212356777643 255565543 799999
Q ss_pred cHHHHHHHhhhhhhcCCccchhhHHHHHHHHHhhcCcccceeeeecccccc-cCC-CCCHHHHHHHcCCEEEEEeCCCcE
Q 000805 247 RLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICT-ASP-ISDLNPLWMASGAKFHIVDCKGNI 324 (1276)
Q Consensus 247 Tl~~l~~~l~~~~~~~~~~~~~~~~~L~~~~~~ias~qIRN~aTiGGNi~~-asp-~sD~~p~Llal~A~v~l~s~~g~~ 324 (1276)
.+.++.....+ ..+. -+..++..+ |||||.+.+ +.- -.++.-+|. .|++.. +|+.
T Consensus 81 ~~~~l~~~~~~--~gl~------------GlE~l~gIP----GTVGGAv~mNaGayG~ei~d~l~----~V~~~~-~g~~ 137 (273)
T PRK14651 81 PLPGLVRRAAR--LGLS------------GLEGLVGIP----AQVGGAVKMNAGTRFGEMADALH----TVEIVH-DGGF 137 (273)
T ss_pred cHHHHHHHHHH--CCCc------------chhhhcCCC----cchhhHHHhhCCccccChheeEE----EEEEEE-CCCE
Confidence 99999987422 1221 122334443 777777643 221 123332222 233334 4558
Q ss_pred EEEEhHhHhccCccccCCCceEEEEEEccCCC
Q 000805 325 RTTMAEEFFLGYRKVDLTSGEILLSIFLPWTR 356 (1276)
Q Consensus 325 R~vpl~~F~~g~~~t~L~~~Eii~~I~iP~~~ 356 (1276)
++++-+|..-+||.+.++.+.||+++.+...+
T Consensus 138 ~~~~~~e~~f~YR~S~~~~~~iIl~a~f~l~~ 169 (273)
T PRK14651 138 HQYSPDELGFGYRHSGLPPGHVVTRVRLKLRP 169 (273)
T ss_pred EEEEHHHccccccccCCCCCEEEEEEEEEECC
Confidence 99999998889999999877799999887654
No 54
>TIGR01677 pln_FAD_oxido plant-specific FAD-dependent oxidoreductase. This model represents an uncharacterized plant-specific family of FAD-dependent oxidoreductases. At least seven distinct members are found in Arabidopsis thaliana. The family shows considerable sequence similarity to three different enzymes of ascorbic acid biosynthesis: L-galactono-1,4-lactone dehydrogenase (EC 1.3.2.3) from higher plants, D-arabinono-1,4-lactone oxidase (EC 1.1.3.37 from Saccharomyces cerevisiae, and L-gulonolactone oxidase (EC 1.1.3.8) from mouse, as well as to a bacterial sorbitol oxidase. The class of compound acted on by members of this family is unknown.
Probab=93.34 E-value=0.37 Score=60.43 Aligned_cols=161 Identities=14% Similarity=0.107 Sum_probs=85.7
Q ss_pred eEEEecCCHHHHHHHHhcC---C-CcEEEEccchhhHHHHhCcCCC-CeEEeCCCCCCCccEEEcCCeEEEcccccHHHH
Q 000805 177 LKWYRPLKLQHLLELKSKY---P-DSKLLVGNTEVGIEMRLKRMQY-QVLISVTHVPELNVLNVKDDGLEIGAAVRLTEL 251 (1276)
Q Consensus 177 ~~~~~P~sl~eal~ll~~~---~-~a~lvaGgTdl~v~~~~~~~~~-~~lIdl~~i~EL~~I~~~~~~l~IGA~vTl~~l 251 (1276)
..+++|+|.+|+.++++.- . ..++++|++.....+-...... ..+||++++..+-.|..+...++++|++++.+|
T Consensus 33 ~~vv~P~s~eeV~~iV~~A~~~g~~v~v~GG~gHs~~~~a~t~~~~ggvvIdL~~Ln~il~iD~~~~tVtV~AG~~l~~L 112 (557)
T TIGR01677 33 ANVAYPKTEAELVSVVAAATAAGRKMKVVTRYSHSIPKLACPDGSDGALLISTKRLNHVVAVDATAMTVTVESGMSLREL 112 (557)
T ss_pred CEEEecCCHHHHHHHHHHHHHCCCeEEEEeCCCCCcCcccccCCCCCEEEEEcccCCCCEEEeCCCCEEEECCCCcHHHH
Confidence 3679999999999888632 2 2455655332211100000011 389999886654445555578999999999999
Q ss_pred HHHhhhhhhcCCccchhhHHHHHHHHHhhcCcccceeeeecccccccCCCCCH-----HHHHHHcCCEEEEEeC--CC--
Q 000805 252 LKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDL-----NPLWMASGAKFHIVDC--KG-- 322 (1276)
Q Consensus 252 ~~~l~~~~~~~~~~~~~~~~~L~~~~~~ias~qIRN~aTiGGNi~~asp~sD~-----~p~Llal~A~v~l~s~--~g-- 322 (1276)
.+.|.+.--. ++ ..+ .+- ..||||.|.++..-+.+ ...=..++.+|++.+. +|
T Consensus 113 ~~~L~~~Gla--------l~-------~~~--~~~-~~TVGGaiatGthGs~~~~~~G~l~d~V~~l~vV~a~G~a~G~~ 174 (557)
T TIGR01677 113 IVEAEKAGLA--------LP-------YAP--YWW-GLTVGGMMGTGAHGSSLWGKGSAVHDYVVGIRLVVPASAAEGFA 174 (557)
T ss_pred HHHHHHcCCE--------ec-------cCC--CCC-CeEeeEhhhCCCCCccccccccchhheEEEEEEEeCCCcccCcc
Confidence 9876432110 01 111 122 25999999876443322 1122334444444322 11
Q ss_pred cEEEEEhH---hHhccCccccCCCceEEEEEEccCCC
Q 000805 323 NIRTTMAE---EFFLGYRKVDLTSGEILLSIFLPWTR 356 (1276)
Q Consensus 323 ~~R~vpl~---~F~~g~~~t~L~~~Eii~~I~iP~~~ 356 (1276)
+.+++.-. |+|..-+ ..+..=-||+++.+...+
T Consensus 175 ~v~~~s~~~~~dLf~a~r-gslG~lGVVtevTL~~~P 210 (557)
T TIGR01677 175 KVRILSEGDTPNEFNAAK-VSLGVLGVISQVTLALQP 210 (557)
T ss_pred eEEEeCCCCCHHHHHhhc-cCCCccEeeeEEEEEEEc
Confidence 23444332 3443211 122222478888886543
No 55
>PRK14648 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=93.08 E-value=0.56 Score=55.07 Aligned_cols=85 Identities=18% Similarity=0.211 Sum_probs=57.5
Q ss_pred CCcccccCCCeEEEecCCHHHHHHHHhcC----CCcEEEEccchhhHHHHhCcCCCCeEEeCCCCCCCccEE-EcC-CeE
Q 000805 167 NPLNLSGFGGLKWYRPLKLQHLLELKSKY----PDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLN-VKD-DGL 240 (1276)
Q Consensus 167 ~~~~~~~~~~~~~~~P~sl~eal~ll~~~----~~a~lvaGgTdl~v~~~~~~~~~~~lIdl~~i~EL~~I~-~~~-~~l 240 (1276)
.++.+ |..-..|+.|.|.+|+.++++.. -...+|.||+-+++. ....+..+|.+.++.++.-.+ .++ ..|
T Consensus 22 tT~rI-GG~A~~~~~p~s~~el~~~l~~~~~~~~p~~iLG~GSNlL~~---D~g~~G~VI~l~~~~~i~i~~~~~~~~~v 97 (354)
T PRK14648 22 CSFRI-GGAAQFWAEPRSCTQLRALIEEAQRARIPLSLIGGGSNVLIA---DEGVPGLMLSLRRFRSLHTQTQRDGSVLV 97 (354)
T ss_pred ceeee-CcEEEEEEeeCCHHHHHHHHHHHHHcCCCEEEEeceeEEEEe---CCCccEEEEEeCCcCceEEeeccCCcEEE
Confidence 34556 55456789999999999988632 136789999999872 222346788875544442111 233 369
Q ss_pred EEcccccHHHHHHHh
Q 000805 241 EIGAAVRLTELLKMF 255 (1276)
Q Consensus 241 ~IGA~vTl~~l~~~l 255 (1276)
++||++.+.++....
T Consensus 98 ~agAG~~~~~Lv~~~ 112 (354)
T PRK14648 98 HAGAGLPVAALLAFC 112 (354)
T ss_pred EEEeCCcHHHHHHHH
Confidence 999999999998764
No 56
>PLN02805 D-lactate dehydrogenase [cytochrome]
Probab=92.91 E-value=0.25 Score=62.00 Aligned_cols=101 Identities=18% Similarity=0.135 Sum_probs=68.4
Q ss_pred eEEEecCCHHHHHHHHh---cCC-CcEEEEccchhhHHHHhCcCCCCeEEeCCCCCCCccEEEcCCeEEEcccccHHHHH
Q 000805 177 LKWYRPLKLQHLLELKS---KYP-DSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELL 252 (1276)
Q Consensus 177 ~~~~~P~sl~eal~ll~---~~~-~a~lvaGgTdl~v~~~~~~~~~~~lIdl~~i~EL~~I~~~~~~l~IGA~vTl~~l~ 252 (1276)
.-.++|+|.+|+.++++ ++. ...+.+|||.+.-.. . ......+||++++..+..|..++..++++|++++.+|.
T Consensus 135 ~~Vv~P~s~eeV~~ivk~a~~~~ipv~prGgGts~~G~~-~-~~~ggivIdl~~mn~I~~id~~~~~vtVeaGv~~~~L~ 212 (555)
T PLN02805 135 DVVVFPRSEEEVSKIVKSCNKYKVPIVPYGGATSIEGHT-L-APHGGVCIDMSLMKSVKALHVEDMDVVVEPGIGWLELN 212 (555)
T ss_pred CEEEEcCCHHHHHHHHHHHHHCCCcEEEECCCCCCCCCc-c-CCCCEEEEEccCCCCeEEEeCCCCEEEEeCCcCHHHHH
Confidence 35789999999888765 332 357788999884110 0 01125899998866665666677899999999999999
Q ss_pred HHhhhhhhcCCccchhhHHHHHHHHHhhcCcccceeeeeccccccc
Q 000805 253 KMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTA 298 (1276)
Q Consensus 253 ~~l~~~~~~~~~~~~~~~~~L~~~~~~ias~qIRN~aTiGGNi~~a 298 (1276)
+.+.+.--.++ . .+. ..+||||+|++.
T Consensus 213 ~~L~~~Gl~~p--------~---------~p~--~~~TIGG~ia~n 239 (555)
T PLN02805 213 EYLEPYGLFFP--------L---------DPG--PGATIGGMCATR 239 (555)
T ss_pred HHHHHcCCEeC--------C---------CCc--cccChhhHhhCC
Confidence 98754321111 1 011 347999999876
No 57
>TIGR01679 bact_FAD_ox FAD-linked oxidoreductase. This model represents a family of bacterial oxidoreductases with covalently linked FAD, closely related to two different eukaryotic oxidases, L-gulonolactone oxidase (EC 1.1.3.8) from rat and D-arabinono-1,4-lactone oxidase (EC 1.1.3.37) from Saccharomyces cerevisiae.
Probab=92.77 E-value=0.24 Score=60.26 Aligned_cols=101 Identities=16% Similarity=0.116 Sum_probs=67.6
Q ss_pred eEEEecCCHHHHHHHHhcCC-CcEEEEccchhhHHHHhCcCCCCeEEeCCCCCCCccEEEcCCeEEEcccccHHHHHHHh
Q 000805 177 LKWYRPLKLQHLLELKSKYP-DSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELLKMF 255 (1276)
Q Consensus 177 ~~~~~P~sl~eal~ll~~~~-~a~lvaGgTdl~v~~~~~~~~~~~lIdl~~i~EL~~I~~~~~~l~IGA~vTl~~l~~~l 255 (1276)
...++|+|.+|+.++++... ..++++||++..-. ......+||++++..+-.+..+.+.++++|++++.+|.+.+
T Consensus 13 ~~v~~P~s~~ev~~~v~~a~~~v~~~G~Ghs~~~~----~~~~g~~idl~~l~~i~~~d~~~~~v~v~aG~~l~~l~~~L 88 (419)
T TIGR01679 13 SAIVRPTDEGELADVIAQAAKPVRAVGSGHSFTDL----ACTDGTMISLTGLQGVVDVDQPTGLATVEAGTRLGALGPQL 88 (419)
T ss_pred CeEECCCCHHHHHHHHHHhCCCEEEEeCCCCCCCc----ccCCCEEEEhhHcCCceeecCCCCEEEEcCCCCHHHHHHHH
Confidence 36799999999999887542 47888888665421 11235899998855443344457899999999999999876
Q ss_pred hhhhhcCCccchhhHHHHHHHHHhhcCcccceeeeecccccccC
Q 000805 256 RKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTAS 299 (1276)
Q Consensus 256 ~~~~~~~~~~~~~~~~~L~~~~~~ias~qIRN~aTiGGNi~~as 299 (1276)
.+.-- .+...++ + +..||||.|+++.
T Consensus 89 ~~~G~---------------~l~~~~~--~-~~~tvGG~ia~~~ 114 (419)
T TIGR01679 89 AQRGL---------------GLENQGD--I-DPQSIGGALGTAT 114 (419)
T ss_pred HHcCC---------------ccccCCC--C-CCceeccceecCC
Confidence 43211 1111222 2 3479999998753
No 58
>PRK09970 xanthine dehydrogenase subunit XdhA; Provisional
Probab=91.70 E-value=3 Score=54.85 Aligned_cols=192 Identities=14% Similarity=0.106 Sum_probs=113.4
Q ss_pred CCCCCeeEEEEecCCCeEEEEeCCCCh-----HHHHHHHHHHhCCCCCcEEEEe-------cccCCCCCCCCCcchHHHH
Q 000805 687 YLEPHSSVVWTMDHGNEVHMISSTQAP-----QKHQKYVSHVLGLPMSKVVCKT-------KRIGGGFGGKETRSAFIAA 754 (1276)
Q Consensus 687 ~mEp~~~~a~~~~~~g~l~V~~stQ~p-----~~~r~~vA~~Lglp~~kV~V~~-------~~vGGgFGgK~~~~~~~a~ 754 (1276)
.++...+....+ .||.++|++++... ..+.+.+|+.||+|.++|+|+. ++-+|.||++.+...-.++
T Consensus 457 ~~~~~~a~v~i~-~dGsv~v~~g~~e~GQG~~T~~aQiaAe~LGi~~~~V~v~~~~dT~~~p~~~gt~aSr~t~~~g~Av 535 (759)
T PRK09970 457 GLEIAGARLLMN-QDGTVQVQSGATEIGQGSDTVFSQMVAETVGIPVSDVRVISTQDTDVTPFDPGAYASRQSYVAGPAI 535 (759)
T ss_pred CCCcceEEEEEc-cCceEEEEECCCCcCCCHHHHHHHHHHHHhCCCHHhEEEEccCCCCCCCCCCCCchhhhHHHHHHHH
Confidence 366778888887 58999999999554 5668899999999999999983 4667888888753222111
Q ss_pred HH----------HHHHHhCCCCEE--------EEec----h---HHHHhhc-C--------------------CCCCeEE
Q 000805 755 AA----------AVPSFLLNRPVN--------LTLD----R---DIDMMIS-G--------------------QRHSFLG 788 (1276)
Q Consensus 755 ~a----------AlaA~~~grPVk--------l~~t----R---~ed~~~~-~--------------------~R~~~~~ 788 (1276)
.. .++|..++-++. +... + -.++... . .-....+
T Consensus 536 ~~Aa~~lr~~l~~~aa~~l~~~~~~l~~~~G~v~~~~~~~~~~~~~~la~~a~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 615 (759)
T PRK09970 536 RKAALELKEKILAHAAVMLHQSAMNLDIIDGHIVVKRPGEPLMSLEELAMDAYYHPERGGQITAESSIKTTTNPPAFGCT 615 (759)
T ss_pred HHHHHHHHHHHHHHHHHHhCCChHHEEEECCEEEECCCCCccccHHHHHHHhhccccCCCceeEEEEecCCCCCCceEEE
Confidence 11 112333332220 0000 0 0001000 0 0112334
Q ss_pred EEEEEEC-CCCcEEEEEEEEEecCCCCCCchH--HHHH----HHhhc-------c-----------CCCcccCeE----E
Q 000805 789 KYKVGFT-NEGKVLALDLEIYNNAGNSLDLSL--AVLE----RAMFH-------S-----------DNVYEIPNV----R 839 (1276)
Q Consensus 789 ~~k~g~~-~dG~i~a~~~~~~~d~Ga~~~~~~--~v~~----~~~~~-------~-----------~~~Y~ipn~----~ 839 (1276)
-.++-+| ..|++.=+++....|+|-..+... +.++ +.+.. . ..-|.+|.. +
T Consensus 616 ~aeVeVD~~TG~v~v~~~~~~~D~G~~iNP~~v~gQi~Gg~~qGiG~aL~E~~~~d~~~G~~~~~~~~dY~ip~~~d~P~ 695 (759)
T PRK09970 616 FVDVEVDIALCKVTINRILNVHDSGHILNPLLAEGQVHGGMGMGIGWALFEEMIIDEKTGVVRNPNLLDYKLPTMMDLPQ 695 (759)
T ss_pred EEEEEEeCCCCeEEEEEEEEEEEcCcccCHHHHHHHHHhHHHHHHHHHhcceeEEcCCCCeECCCChhhccCCCcccCCC
Confidence 4567777 689999999999999998765210 0000 01100 0 113544333 3
Q ss_pred EEEEEEecCCCCCCc--ccCCChhhhHhHHHHHHHHHHHHcCC
Q 000805 840 IMGNVCFTNFPSNTA--FRGFGGPQGMLITENWIQRVAVEVRK 880 (1276)
Q Consensus 840 ~~~~~v~TN~~~~~a--~Rg~G~~q~~fa~E~~md~lA~~lg~ 880 (1276)
++...+.++.++ +. -+|.|.+...-+.=.+.+-+++.+|.
T Consensus 696 i~v~~ve~~~~~-~p~GaKgvGE~~~~~~~~AIanAi~~A~G~ 737 (759)
T PRK09970 696 LESAFVEIYEPQ-SAYGHKSLGEPPIISPAPAIRNAVLMATGV 737 (759)
T ss_pred eEEEEEecCCCC-CCCCCcccCCCcccchHHHHHHHHHHhhCC
Confidence 556666776553 44 67888887777777778888888875
No 59
>PRK11282 glcE glycolate oxidase FAD binding subunit; Provisional
Probab=90.41 E-value=0.66 Score=54.97 Aligned_cols=95 Identities=13% Similarity=0.088 Sum_probs=58.5
Q ss_pred HHHHHHHHhcCC-CcEEEEccchhhHHHHhCcCCCCeEEeCCCCCCCccEEEcCCeEEEcccccHHHHHHHhhhhhhcCC
Q 000805 185 LQHLLELKSKYP-DSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELLKMFRKVVTERP 263 (1276)
Q Consensus 185 l~eal~ll~~~~-~a~lvaGgTdl~v~~~~~~~~~~~lIdl~~i~EL~~I~~~~~~l~IGA~vTl~~l~~~l~~~~~~~~ 263 (1276)
|.++++...++. ..++.+|||.... +......+||++++...-.+..++..++++|++++.||.+.|.+.-..++
T Consensus 7 v~~~v~~A~~~~~~v~~~GgGt~~~~----g~~~~~~vldl~~ln~Ile~d~~~~~vtV~AG~~l~el~~~L~~~G~~lp 82 (352)
T PRK11282 7 LLERVRQAAADGTPLRIRGGGSKDFY----GRALAGEVLDTRAHRGIVSYDPTELVITARAGTPLAELEAALAEAGQMLP 82 (352)
T ss_pred HHHHHHHHHHCCCeEEEECCCCCCCC----CCCCCCeEEEcccCCCcEEEcCCCCEEEECCCCCHHHHHHHHHHcCCeeC
Confidence 344444444543 3778888885422 11123458999876555445556778999999999999998654211111
Q ss_pred ccchhhHHHHHHHHHhhcCcccceeeeecccccccC
Q 000805 264 AHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTAS 299 (1276)
Q Consensus 264 ~~~~~~~~~L~~~~~~ias~qIRN~aTiGGNi~~as 299 (1276)
+--+.....+||||+|+++.
T Consensus 83 ----------------~~p~~~~~~~TIGG~iatg~ 102 (352)
T PRK11282 83 ----------------FEPPHFGGGATLGGMVAAGL 102 (352)
T ss_pred ----------------CCCCCcCCCcEehhHHhcCC
Confidence 00112333589999999763
No 60
>TIGR03194 4hydrxCoA_A 4-hydroxybenzoyl-CoA reductase, alpha subunit. This model represents the largest chain, alpha, of the enzyme 4-hydroxybenzoyl-CoA reductase. In species capable of degrading various aromatic compounds by way of benzoyl-CoA, this enzyme can convert 4-hydroxybenzoyl-CoA to benzoyl-CoA.
Probab=89.85 E-value=11 Score=49.60 Aligned_cols=59 Identities=10% Similarity=0.179 Sum_probs=46.6
Q ss_pred CCCCeeEEEEecCCCeEEEEeCCCCh-----HHHHHHHHHHhCCCCCcEEEEecc------cCCCCCCCCC
Q 000805 688 LEPHSSVVWTMDHGNEVHMISSTQAP-----QKHQKYVSHVLGLPMSKVVCKTKR------IGGGFGGKET 747 (1276)
Q Consensus 688 mEp~~~~a~~~~~~g~l~V~~stQ~p-----~~~r~~vA~~Lglp~~kV~V~~~~------vGGgFGgK~~ 747 (1276)
..+..+.+..+ .||.++|+++++.. ..++..+|+.||+|.++|+|.... -+|.+|++.+
T Consensus 442 ~~~~~a~v~l~-~dG~v~v~~g~~e~GqG~~T~~~qiaAe~LGip~d~V~v~~~DT~~~p~~~gt~~Sr~t 511 (746)
T TIGR03194 442 EPHATVALKLD-FDGGITLLTGAADIGQGSSTIASQVAAEVLGVRLSRIRVISADSALTPKDNGSYSSRVT 511 (746)
T ss_pred CCCceEEEEEc-CCccEEEEEcCCCCCCCHHHHHHHHHHHHhCCCHHhEEEEccCCCCCCCCCCChhHhHH
Confidence 33567777776 58999999988765 567889999999999999998654 5677777765
No 61
>TIGR03311 Se_dep_Molyb_1 selenium-dependent molybdenum hydroxylase 1. Members of this protein family show full length homology to the molybdenum-containing aldehyde oxido-reductase of Desulfovibrio gigas. Members, however, are found only within species that have, and near those genes that encode, a set of predicted accessory proteins for selenium-dependent molybdenum hydroxylases. The best known examples of such enzymes are forms of xanthine dehydrogenase and purine hydroxylase; this family appears to be another such enzyme.
Probab=88.99 E-value=5.2 Score=53.19 Aligned_cols=86 Identities=40% Similarity=0.741 Sum_probs=81.6
Q ss_pred CccccccC---CCceecCCC-----CcHHHHHHHHcCCCCCCCCChHHHHHHHHHHHcCCCCCCHHHHHHHccCccccCC
Q 000805 1 MACIQFNA---NKLLTSLDL-----RYVLQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLAGNLCRCT 72 (1276)
Q Consensus 1 ~~c~~~~~---~~~~~t~~~-----~~~~q~~~~~~~~~qCg~Ctpg~v~~~~~~l~~~~~~~~~~~i~~~~~gnlCrCt 72 (1276)
.||++++. |++|+|+|+ +||||++|+++|++|||||||||||++++||+++++| ++++|+++|+|||||||
T Consensus 53 ~sc~~~~~~~~g~~i~T~egl~~~~~~~~q~a~~~~~~~qcG~ctpg~~~~~~~ll~~~~~p-~~~~i~~~l~gnlcrct 131 (848)
T TIGR03311 53 RACRFTTAKLAGKEITTVEGLTEREKDVYAWAFAKAGAVQCGFCIPGMVISAKALLDKNPNP-TEAEIKKALKGNICRCT 131 (848)
T ss_pred ehhhhhHHhcCCCEEEecCCCCCCCCCHHHHHHHHcCCCcCCCCchhHHHHHHHHHhcCCCC-CHHHHHHHHhcCccccC
Confidence 38999998 899999998 4899999999999999999999999999999999999 99999999999999999
Q ss_pred CCHhHHHHHHHHHhc
Q 000805 73 GYRPIVDAFRVFAKT 87 (1276)
Q Consensus 73 gy~~i~~a~~~~~~~ 87 (1276)
||++|++|++.+++.
T Consensus 132 gy~~i~~a~~~~~~~ 146 (848)
T TIGR03311 132 GYVKIIKAVRLAAKA 146 (848)
T ss_pred ChHHHHHHHHHHHHh
Confidence 999999999987654
No 62
>PRK09800 putative hypoxanthine oxidase; Provisional
Probab=88.82 E-value=6.6 Score=52.74 Aligned_cols=85 Identities=20% Similarity=0.345 Sum_probs=81.2
Q ss_pred ccccccC---CCceecCCC------CcHHHHHHHHcCCCCCCCCChHHHHHHHHHHHcCCCCCCHHHHHHHccCccccCC
Q 000805 2 ACIQFNA---NKLLTSLDL------RYVLQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLAGNLCRCT 72 (1276)
Q Consensus 2 ~c~~~~~---~~~~~t~~~------~~~~q~~~~~~~~~qCg~Ctpg~v~~~~~~l~~~~~~~~~~~i~~~~~gnlCrCt 72 (1276)
||++++. |++|+|+|+ +||+|+||+++++.|||||||||||++++||+++++| +++||+++|+|||||||
T Consensus 58 sC~~~~~~~~g~~i~Tvegl~~~~~~~~~q~af~~~~~~QCG~CtpG~~m~~~~ll~~~~~p-~~~~i~~~l~gnlCRCt 136 (956)
T PRK09800 58 ASLLIAAQLEKADIRTAESLGKWNELSLVQQAMVDVGVVQSGYNDPAAALIITDLLDRIAAP-TREEIDDALSGLFSRDA 136 (956)
T ss_pred HHHHHHHHcCCCEEEecCCcCCCCCCCHHHHHHHHcCCCcCCCChHHHHHHHHHHHhcCCCC-CHHHHHHHHhhchhccC
Confidence 8999988 899999998 5999999999999999999999999999999999999 99999999999999999
Q ss_pred CCHhHHHHHHHHHhc
Q 000805 73 GYRPIVDAFRVFAKT 87 (1276)
Q Consensus 73 gy~~i~~a~~~~~~~ 87 (1276)
||++|++|++.++..
T Consensus 137 gy~~i~~av~~~~~~ 151 (956)
T PRK09800 137 GWQQYYQVIELAVAR 151 (956)
T ss_pred CcHHHHHHHHHHHHh
Confidence 999999999877654
No 63
>PLN02441 cytokinin dehydrogenase
Probab=88.67 E-value=3.6 Score=51.27 Aligned_cols=157 Identities=12% Similarity=0.073 Sum_probs=86.8
Q ss_pred eEEEecCCHHHHHHHHhcC-----C-CcEEEEccchhhHHHHhCcCCCCeEEeCCCCCC------CccEEEcCCeEEEcc
Q 000805 177 LKWYRPLKLQHLLELKSKY-----P-DSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPE------LNVLNVKDDGLEIGA 244 (1276)
Q Consensus 177 ~~~~~P~sl~eal~ll~~~-----~-~a~lvaGgTdl~v~~~~~~~~~~~lIdl~~i~E------L~~I~~~~~~l~IGA 244 (1276)
...++|+|.+|+.++++.. + ..++.+||++..- ........+||++++.. ...+..+...+++||
T Consensus 66 ~aVv~P~S~eDVa~iVr~A~~~~~~~~V~~rGgGHS~~G---~a~~~~GivIdms~Ln~i~~~~~ii~vd~~~~~VtV~a 142 (525)
T PLN02441 66 AAVLYPSSVEDIASLVRAAYGSSSPLTVAARGHGHSLNG---QAQAPGGVVVDMRSLRGGVRGPPVIVVSGDGPYVDVSG 142 (525)
T ss_pred CEEEeCCCHHHHHHHHHHHhhccCCceEEEECCCcCCCC---CccCCCeEEEECCCCCCcCccCceEEEcCCCCEEEEcC
Confidence 4679999999999887643 1 2456678888742 11222368999998765 223334557899999
Q ss_pred cccHHHHHHHhhhhhhcCCccchhhHHHHHHHHHhhcCcccceeeeecccccccCCC--CCHHHHHHHcCCEEEEEeCCC
Q 000805 245 AVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPI--SDLNPLWMASGAKFHIVDCKG 322 (1276)
Q Consensus 245 ~vTl~~l~~~l~~~~~~~~~~~~~~~~~L~~~~~~ias~qIRN~aTiGGNi~~asp~--sD~~p~Llal~A~v~l~s~~g 322 (1276)
++++.++.+.+.+. .+. ..+..=-+..|+||+|.++.-. +=-...+...=-.++++..+|
T Consensus 143 G~~~~dv~~~l~~~--Gla----------------P~~~~d~~~~TVGG~ist~G~gg~s~ryG~~~d~Vl~leVVtadG 204 (525)
T PLN02441 143 GELWIDVLKATLKH--GLA----------------PRSWTDYLYLTVGGTLSNAGISGQAFRHGPQISNVLELDVVTGKG 204 (525)
T ss_pred CCCHHHHHHHHHHC--CCc----------------cCCccccCceEEeEEcCCCCccccccccCcHHHhEEEEEEEeCCc
Confidence 99999998764321 000 0111112357999999985211 100001111112244555666
Q ss_pred cEEEEEh---HhHhccCccccCCCceEEEEEEccCC
Q 000805 323 NIRTTMA---EEFFLGYRKVDLTSGEILLSIFLPWT 355 (1276)
Q Consensus 323 ~~R~vpl---~~F~~g~~~t~L~~~Eii~~I~iP~~ 355 (1276)
+.++.+- .|+|..-+- .+..=-|||++.|...
T Consensus 205 evv~~s~~~n~DLF~Av~G-glG~fGIIT~atlrL~ 239 (525)
T PLN02441 205 EVVTCSPTQNSDLFFAVLG-GLGQFGIITRARIALE 239 (525)
T ss_pred eEEEeCCCCChhHHHhhcc-CCCCcEEEEEEEEEEE
Confidence 4444433 244432111 1222248999888654
No 64
>PF02738 Ald_Xan_dh_C2: Molybdopterin-binding domain of aldehyde dehydrogenase; InterPro: IPR008274 Aldehyde oxidase (1.2.3.1 from EC) catalyses the conversion of an aldehyde in the presence of oxygen and water to an acid and hydrogen peroxide. The enzyme is a homodimer, and requires FAD, molybdenum and two 2FE-2S clusters as cofactors. Xanthine dehydrogenase (1.1.1.204 from EC) catalyses the hydrogenation of xanthine to urate, and also requires FAD, molybdenum and two 2FE-2S clusters as cofactors. This activity is often found in a bifunctional enzyme with xanthine oxidase (1.1.3.22 from EC) activity too. The enzyme can be converted from the dehydrogenase form to the oxidase form irreversibly by proteolysis or reversibly through oxidation of sulphydryl groups.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3NVZ_C 3NVY_C 1FO4_B 3NRZ_L 3AM9_A 3B9J_C 3AX7_B 3NVW_L 3BDJ_A 3ETR_N ....
Probab=87.40 E-value=11 Score=47.77 Aligned_cols=191 Identities=16% Similarity=0.134 Sum_probs=96.6
Q ss_pred CCceeEEEEEecCCeEEEEEcCccCCcchHHHHHHHHHHHhCCCcccEEEecCCCCCCCCCCCCccch-hhhHHHHHHHH
Q 000805 958 MNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETSTDKVPNASPTAASA-SSDIYGAAVLD 1036 (1276)
Q Consensus 958 ~~~~~a~V~l~~DGsV~V~~g~~e~GqG~~T~~~qiaAe~Lgip~~~V~v~~~dT~~~p~~~~t~~Sr-~t~~~g~Av~~ 1036 (1276)
+...++....+.||.++|.++.+. -..+...+|+.||||+++|+|.. |.-++.+|++ ......-.+..
T Consensus 48 mEp~~~~A~~~~~g~l~v~~~tQ~-----p~~~r~~va~~lglp~~~V~V~~------~~~GGgFG~~~~~~~~~~~aa~ 116 (547)
T PF02738_consen 48 MEPHGAVAWWDEDGRLTVWSSTQW-----PFHVRRAVAEALGLPPEKVRVIS------PYVGGGFGKKKQDSPIAVLAAL 116 (547)
T ss_dssp SS-SEEEEEEETTTEEEEEES-SS-----HHHHHHHHHHHHTS-GGGEEEEE------SB-S--TTTTSSTHHHHHHHHH
T ss_pred CCCCeEEEEEccCCCEEEEECCcC-----HhHHHHHHhhhhcCChhHEEEee------eecCCCCCCccccchHHHHHHH
Confidence 445667777778999999988543 34567889999999999999984 4455666632 23323333333
Q ss_pred HHHHHHHHHHHhhhcCCCCCHHHHHHHhhccCcceeEEEEeecCCccccccCCCCCCcccccEEEEEEEEEeeCCCCcEE
Q 000805 1037 ACEQIKARMEPIASKHNFNSFAELASACYVQRIDLSAHGFYITPEIDFDWITGKGNPFRYFTYGAAFAEVEIDTLTGDFH 1116 (1276)
Q Consensus 1037 Ac~~l~~rl~~~~~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~ga~~~eVEVD~~TG~v~ 1116 (1276)
+++++++ |++-. .+-+|-.... .+ -.-..+-.++-+|. .|++.
T Consensus 117 ~a~~~gr---PVk~~---~tR~e~~~~~-----------~~-------------------r~~~~~~~~~g~~~-dG~i~ 159 (547)
T PF02738_consen 117 AAKKTGR---PVKLV---WTREEDFRAG-----------PK-------------------RPPTRIRVRAGADK-DGKIT 159 (547)
T ss_dssp HHHHHSS---EEEEE-----HHHHHHHS------------B-------------------B-EEEEEEEEEE-T-TS-EE
T ss_pred HHhccCc---eEEEE---echHHhcCCC-----------CC-------------------ccHHHhhhhheECC-CCCEE
Confidence 3444421 11100 1111111000 00 01112344666774 79999
Q ss_pred EeEEEEEEecCcccChhhhhhhhhhHHHHHHHHHhcceEEecCCCCccCCCCccccCCCCCCCCCCCCCCCCccEEEEec
Q 000805 1117 TRMANVILDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPGCLYTCGPGSYKIPSLNDVPLKFNVSLLK 1196 (1276)
Q Consensus 1117 V~r~~~v~D~G~~iNP~~~~gQieGg~~qGlG~al~Ee~~~d~~~~~~~~~G~~~t~~~~~Y~iP~~~diP~~~~v~~~~ 1196 (1276)
=.++.+..|.|-.-+.... +...+... ...-|++|.. +++...+.
T Consensus 160 a~~~~~~~d~Ga~~~~~~~--------~~~~~~~~----------------------~~~~Y~ipn~-----~~~~~~v~ 204 (547)
T PF02738_consen 160 ALDHDIYADGGAYASFSPA--------VAPRAGAG----------------------ADGPYRIPNV-----RIDARAVY 204 (547)
T ss_dssp EEEEEEEEEEESS-TTHHH--------HHHHHHHT----------------------TTTTB--SEE-----EEEEEEEE
T ss_pred EeeeeeeccCCcccccccc--------chhhhhcc----------------------cCCCcccccE-----EEEEEecc
Confidence 9999999999866443211 11111110 0223554421 24444555
Q ss_pred CCCCCCCCCCCCcCCCCCccchhhHHHHHHHHHHHHHHhcCCC
Q 000805 1197 GHPNVKAIHSSKAVGEPPFFLASSVFFAIKDAISAARADAGHT 1239 (1276)
Q Consensus 1197 ~~~~~~~~~gaKgvGE~~~~~~~~v~~Ai~nAi~~A~~~~G~~ 1239 (1276)
+...|.+.| +|.|.+.. .+|+...+..+..+.|.+
T Consensus 205 Tn~~~~g~~--Rg~G~~q~------~fa~E~~~DelA~~lg~D 239 (547)
T PF02738_consen 205 TNTPPAGAF--RGFGAPQA------AFALESFMDELAEKLGMD 239 (547)
T ss_dssp -SSSSBE-S--TTTTHHHH------HHHHHHHHHHHHHHHTS-
T ss_pred CCCCCCCcC--CCCCHHHH------HHHHHHHHHHHHHHhCcC
Confidence 423444544 57777653 688888888877666754
No 65
>TIGR03313 Se_sel_red_Mo probable selenate reductase, molybdenum-binding subunit. Our comparative genomics suggests this protein family to be a subunit of a selenium-dependent molybdenum hydroxylase, although the substrate is not specified. This protein is suggested by Bebien, et al., to be the molybdenum-binding subunit of a molydbopterin-containing selenate reductase. Xi, et al, however, show that mutation of this gene in E. coli conferred sensitivity to adenine, suggesting a defect in purine interconversion. This finding, plus homology of nearby genes in a 23-gene purine catabolism region in E. coli to xanthine dehydrogase subunits suggests xanthine dehydrogenase activity.
Probab=85.52 E-value=12 Score=50.48 Aligned_cols=85 Identities=20% Similarity=0.368 Sum_probs=81.3
Q ss_pred ccccccC---CCceecCCC------CcHHHHHHHHcCCCCCCCCChHHHHHHHHHHHcCCCCCCHHHHHHHccCccccCC
Q 000805 2 ACIQFNA---NKLLTSLDL------RYVLQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLAGNLCRCT 72 (1276)
Q Consensus 2 ~c~~~~~---~~~~~t~~~------~~~~q~~~~~~~~~qCg~Ctpg~v~~~~~~l~~~~~~~~~~~i~~~~~gnlCrCt 72 (1276)
||++|+. |++|+|+|+ +||+|++|+++++.|||||||||||++++||+++++| +++||+++|+|||||||
T Consensus 54 sC~~~~~~~~g~~i~Tiegl~~~~~~~~~q~af~~~~a~QCG~CtpG~~~~~~~ll~~~~~p-~~~~i~~~l~gnlcrct 132 (951)
T TIGR03313 54 ASLLIAAQLEGAEVRTAESLGQWNQLSLVQQAMVDVGVVQSGYNDPAAALILTDLLDRNTQP-NRAEIDDALSGLFSRDA 132 (951)
T ss_pred HHHHHHHHcCCCEEEecCcCCCCCCCCHHHHHHHHcCCCcCCCChHHHHHHHHHHHhcCCCC-CHHHHHHHHhcceeccC
Confidence 8999998 899999998 6999999999999999999999999999999999999 99999999999999999
Q ss_pred CCHhHHHHHHHHHhc
Q 000805 73 GYRPIVDAFRVFAKT 87 (1276)
Q Consensus 73 gy~~i~~a~~~~~~~ 87 (1276)
||++|++|++.++..
T Consensus 133 gy~~i~~av~~~~~~ 147 (951)
T TIGR03313 133 GYQQFYQVIELAVKR 147 (951)
T ss_pred CcHHHHHHHHHHHHh
Confidence 999999999987653
No 66
>TIGR03196 pucD xanthine dehydrogenase D subunit. This gene has been characterized in B. subtilis as the molybdopterin binding-subunit of xanthine dehydrogenase (pucD), acting in conjunction with pucC, the FAD-binding subunit and pucE, the FeS-binding subunit. The more common XDH complex (GenProp0640) includes the xdhB gene which is related to pucD. It appears that most of the relatives of pucD outside of this narrow clade are involved in other processes as they are found in unrelated genomic contexts, contain the more common XDH complex and/or do not appear to process purines to allantoin.
Probab=83.92 E-value=38 Score=44.72 Aligned_cols=60 Identities=15% Similarity=0.130 Sum_probs=44.0
Q ss_pred CCceeEEEEEecCCeEEEEEcCccCCcchHHHHHHHHHHHhCCCcccEEEecCCCCCCCCCCCCccchhhh
Q 000805 958 MNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETSTDKVPNASPTAASASSD 1028 (1276)
Q Consensus 958 ~~~~~a~V~l~~DGsV~V~~g~~e~GqG~~T~~~qiaAe~Lgip~~~V~v~~~dT~~~p~~~~t~~Sr~t~ 1028 (1276)
+...++....+.||+++|.++.+. . ..+...+|+.||+|.++|+|.. |.-+|.+|++...
T Consensus 182 mEp~~~~A~~~~~g~l~v~~stQ~----p-~~~r~~lA~~Lglp~~~VrV~~------~~vGGgFG~K~~~ 241 (768)
T TIGR03196 182 LAPEAALAMPAADGGFDLRAATQH----G-HKDREQIAACFDIPEEKIRITL------AGMGGAFGGKDDL 241 (768)
T ss_pred cCCceEEEEEcCCCCEEEEECCCc----h-HHHHHHHHHHhCCCHHHEEEEe------CCCCCccCCcccc
Confidence 345566666667899999988543 3 3456788899999999999984 4567777777554
No 67
>TIGR02969 mam_aldehyde_ox aldehyde oxidase. Members of this family are mammalian aldehyde oxidase (EC 1.2.3.1) isozymes, closely related to xanthine dehydrogenase/oxidase.
Probab=83.36 E-value=6.9 Score=54.47 Aligned_cols=59 Identities=19% Similarity=0.169 Sum_probs=46.8
Q ss_pred CCCCeeEEEEecCCCeEEEEeCCCCh-----HHHHHHHHHHhCCCCCcEEEEec------ccCCCCCCCCC
Q 000805 688 LEPHSSVVWTMDHGNEVHMISSTQAP-----QKHQKYVSHVLGLPMSKVVCKTK------RIGGGFGGKET 747 (1276)
Q Consensus 688 mEp~~~~a~~~~~~g~l~V~~stQ~p-----~~~r~~vA~~Lglp~~kV~V~~~------~vGGgFGgK~~ 747 (1276)
+...++++..+ .||.++|+++++.. ..+...+|+.||||.++|+|... +-+|.+|++.+
T Consensus 1015 ~~~~~a~v~i~-~DGsV~V~~G~~e~GQG~~T~~aQiaAe~LGip~e~V~v~~~DT~~~p~~~gt~gSr~t 1084 (1330)
T TIGR02969 1015 MGQAAALVHIY-LDGSVLVTHGGIEMGQGVHTKMIQVVSRELKMPMSNVHLRGTSTETVPNTNASGGSVVA 1084 (1330)
T ss_pred CCCccEEEEEc-CCceEEEEECCcCcCCChHHHHHHHHHHHhCCCHHHEEEEcCCCCCCCCCCCCchHHHH
Confidence 44567777776 48999999998765 45678899999999999999864 34788888865
No 68
>PLN02906 xanthine dehydrogenase
Probab=83.14 E-value=45 Score=46.72 Aligned_cols=191 Identities=12% Similarity=0.121 Sum_probs=107.3
Q ss_pred CCceeEEEEEecC-CeEEEEEcCccCCcchHHHHHHHHHHHhCCCcccEEEecCCCCCCCCCCCCccchhhhH--HHHHH
Q 000805 958 MNQAGALVHVYTD-GTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETSTDKVPNASPTAASASSDI--YGAAV 1034 (1276)
Q Consensus 958 ~~~~~a~V~l~~D-GsV~V~~g~~e~GqG~~T~~~qiaAe~Lgip~~~V~v~~~dT~~~p~~~~t~~Sr~t~~--~g~Av 1034 (1276)
+...++....+.| |.++|+++.+.. ..+...+|+.||||.++|+|. ++.-+|.+|++.+.. ...++
T Consensus 740 mEp~~~~A~~~~~~g~l~v~~sTQ~p-----~~~r~~vA~~Lgip~~kVrV~------~~~vGGgFGgK~~~~~~~~~~a 808 (1319)
T PLN02906 740 LEPNSSLVWTSDSGNEVHMISSTQAP-----QKHQKYVAHVLGLPMSKVVCK------TKRIGGGFGGKETRSAFIAAAA 808 (1319)
T ss_pred cCCCeEEEEEeCCCCEEEEEECCcCH-----HHHHHHHHHHhCCChHHeEEE------eCCcccCccccccccchHHHHH
Confidence 4455666666667 689999886542 456778999999999999998 445667777776532 22333
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCHHHHHHHhhccCcceeEEEEeecCCccccccCCCCCCcccccEEEEEEEEEeeCCCCc
Q 000805 1035 LDACEQIKARMEPIASKHNFNSFAELASACYVQRIDLSAHGFYITPEIDFDWITGKGNPFRYFTYGAAFAEVEIDTLTGD 1114 (1276)
Q Consensus 1035 ~~Ac~~l~~rl~~~~~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~ga~~~eVEVD~~TG~ 1114 (1276)
..|++++++ |++-. .+-+|-. ...+ ...+ + .+=.++-+|. .|+
T Consensus 809 AlaA~~~gR---PVkl~---~sReE~~----------~~~~--------------~R~~-----~-~~~~k~g~~~-dG~ 851 (1319)
T PLN02906 809 AVPAYLLNR---PVKLT---LDRDVDM----------MITG--------------QRHA-----F-LGKYKVGFTN-EGK 851 (1319)
T ss_pred HHHHHHhCC---CEEEE---ecHHHHh----------hhcC--------------Cccc-----e-EEEEEEEECC-CCC
Confidence 344444432 21110 0111110 0000 0001 0 1223666774 699
Q ss_pred EEEeEEEEEEecCcccChhhhhhhhhhHHHHHHHHHhcceEEecCCCCccCCCCccccCCCCCCCCCCCCCCCCccEEEE
Q 000805 1115 FHTRMANVILDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPGCLYTCGPGSYKIPSLNDVPLKFNVSL 1194 (1276)
Q Consensus 1115 v~V~r~~~v~D~G~~iNP~~~~gQieGg~~qGlG~al~Ee~~~d~~~~~~~~~G~~~t~~~~~Y~iP~~~diP~~~~v~~ 1194 (1276)
+.=+++.+..|.|-..+.... ++..+... . ..-|++|.. +++...
T Consensus 852 I~a~~~~~~~d~Ga~~~~~~~--------v~~~~~~~-----~-----------------~~~Y~ipn~-----~~~~~~ 896 (1319)
T PLN02906 852 ILALDLEIYNNGGNSLDLSGA--------VLERAMFH-----S-----------------DNVYEIPNV-----RIVGNV 896 (1319)
T ss_pred EEEEEEEEEecCcccCCcchH--------HHHHHHHh-----c-----------------CCCccCcce-----EEEEEE
Confidence 999999999999988754211 11111100 1 123665532 244455
Q ss_pred ecCCCCCCCCCCCCcCCCCCccchhhHHHHHHHHHHHHHHhcCCC
Q 000805 1195 LKGHPNVKAIHSSKAVGEPPFFLASSVFFAIKDAISAARADAGHT 1239 (1276)
Q Consensus 1195 ~~~~~~~~~~~gaKgvGE~~~~~~~~v~~Ai~nAi~~A~~~~G~~ 1239 (1276)
+.+...|.|.| +|.|.+-. .+|+..++..+..+.|.+
T Consensus 897 v~TN~~~~ga~--RG~G~pq~------~fa~E~~mD~lA~~lG~D 933 (1319)
T PLN02906 897 CFTNFPSNTAF--RGFGGPQG------MLITENWIQRIAVELNKS 933 (1319)
T ss_pred EECCCCCCCcc--cCCCHHHH------HHHHHHHHHHHHHHhCcC
Confidence 55523455555 56666653 578888888777667754
No 69
>PLN00192 aldehyde oxidase
Probab=79.11 E-value=41 Score=47.25 Aligned_cols=190 Identities=15% Similarity=0.128 Sum_probs=105.8
Q ss_pred CCceeEEEEEecCCeEEEEEcCccCCcchHHHHHHHHHHHhCCCcccEEEecCCCCCCCCCCCCccchhhhHHH--HHHH
Q 000805 958 MNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETSTDKVPNASPTAASASSDIYG--AAVL 1035 (1276)
Q Consensus 958 ~~~~~a~V~l~~DGsV~V~~g~~e~GqG~~T~~~qiaAe~Lgip~~~V~v~~~dT~~~p~~~~t~~Sr~t~~~g--~Av~ 1035 (1276)
+...++....+.||.++|+++.+. -+.+...+|+.||||.++|+|.. +.-+|.+|++.+...- -++.
T Consensus 761 mEp~~~vA~~~~dg~l~V~~sTQ~-----p~~~r~~vA~~Lgip~~~VrV~~------~~vGGgFGgK~~~~~~~~~~aA 829 (1344)
T PLN00192 761 METQTALALPDEDNCIVVYSSTQC-----PEYVHSVIARCLGIPEHNVRVIT------RRVGGGFGGKAVKSMPVATACA 829 (1344)
T ss_pred ccCceEEEEEcCCCCEEEEECCCC-----HHHHHHHHHHHhCCChHHEEEEe------cccccCCCccccccchHHHHHH
Confidence 445567777777899999987543 24567789999999999999984 4567777777542222 2222
Q ss_pred HHHHHHHHHHHHhhhcCCCCCHHHHHHHhhccCcceeEEEEeecCCccccccCCCCCCcccccEEEEEEEEEeeCCCCcE
Q 000805 1036 DACEQIKARMEPIASKHNFNSFAELASACYVQRIDLSAHGFYITPEIDFDWITGKGNPFRYFTYGAAFAEVEIDTLTGDF 1115 (1276)
Q Consensus 1036 ~Ac~~l~~rl~~~~~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~ga~~~eVEVD~~TG~v 1115 (1276)
.|++++++ |++-. .+-+|- +...+ .. ..+-. =.++-+|. .|++
T Consensus 830 laA~~~gR---PVr~~---~sR~Ed----------m~~~~--------------~R-----~~~~~-~~k~g~~~-dG~I 872 (1344)
T PLN00192 830 LAAFKLQR---PVRMY---LNRKTD----------MIMAG--------------GR-----HPMKI-TYSVGFKS-DGKI 872 (1344)
T ss_pred HHHHHhCC---CEEEE---ecHHHH----------hhhcC--------------Cc-----CceEE-EEEEEECC-CCCE
Confidence 33344421 21100 011110 00000 00 01111 33666774 7999
Q ss_pred EEeEEEEEEecCcccChhhhhhhhhhHHHHHHHHHhcceEEecCCCCccCCCCccccCCCCCCCCCCCCCCCCccEEEEe
Q 000805 1116 HTRMANVILDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPGCLYTCGPGSYKIPSLNDVPLKFNVSLL 1195 (1276)
Q Consensus 1116 ~V~r~~~v~D~G~~iNP~~~~gQieGg~~qGlG~al~Ee~~~d~~~~~~~~~G~~~t~~~~~Y~iP~~~diP~~~~v~~~ 1195 (1276)
.=.++.+..|.|-..+-. .++. .++. .. ..-|++|.. .++...+
T Consensus 873 ~a~~~~~~~d~Ga~~~~~--------~~~~---~~~~---~~-----------------~~~Y~ipn~-----~~~~~~v 916 (1344)
T PLN00192 873 TALHLDILINAGISPDIS--------PIMP---RNII---GA-----------------LKKYDWGAL-----SFDIKVC 916 (1344)
T ss_pred EEEEEEEEEecccCCCcc--------hHHH---HHHh---hc-----------------CCCcCCCce-----EEEEEEE
Confidence 999999999999765411 1111 0000 01 113665532 2444455
Q ss_pred cCCCCCCCCCCCCcCCCCCccchhhHHHHHHHHHHHHHHhcCCC
Q 000805 1196 KGHPNVKAIHSSKAVGEPPFFLASSVFFAIKDAISAARADAGHT 1239 (1276)
Q Consensus 1196 ~~~~~~~~~~gaKgvGE~~~~~~~~v~~Ai~nAi~~A~~~~G~~ 1239 (1276)
.+...|.++| +|.|.+-. .+|+...+..+..+.|.+
T Consensus 917 ~TN~~~~ga~--RG~G~pq~------~fa~E~~mD~lA~~lg~D 952 (1344)
T PLN00192 917 KTNLSSRSAM--RAPGEVQG------SYIAEAIIEHVASTLSMD 952 (1344)
T ss_pred ECCCCCCCcc--cCCCHHHH------HHHHHHHHHHHHHHhCcC
Confidence 5423455655 57776654 578888888777667754
No 70
>TIGR02416 CO_dehy_Mo_lg carbon-monoxide dehydrogenase, large subunit. This model represents the large subunits of group of carbon-monoxide dehydrogenases that include molybdenum as part of the enzymatic cofactor. There are various forms of carbon-monoxide dehydrogenase; Salicibacter pomeroyi DSS-3, for example, has two forms. Note that, at least in some species, the active site Cys is modified with a selenium attached to (rather than replacing) the sulfur atom. This is termed selanylcysteine, and created post-translationally, in contrast to selenocysteine incorporation during translation as for many other selenoproteins.
Probab=70.35 E-value=7.7 Score=51.14 Aligned_cols=71 Identities=15% Similarity=0.204 Sum_probs=51.1
Q ss_pred CeeEEEEecCCCeEEEEeCCCCh-----HHHHHHHHHHhCCCCCcEEEEec------ccCCCCCCCCCcchHHHHHHHHH
Q 000805 691 HSSVVWTMDHGNEVHMISSTQAP-----QKHQKYVSHVLGLPMSKVVCKTK------RIGGGFGGKETRSAFIAAAAAVP 759 (1276)
Q Consensus 691 ~~~~a~~~~~~g~l~V~~stQ~p-----~~~r~~vA~~Lglp~~kV~V~~~------~vGGgFGgK~~~~~~~a~~aAla 759 (1276)
..+.+..+ .||.++|+++++.. ..+.+.+|+.||+|.++|+|... +-+|.||++.+.. ...++-.|
T Consensus 476 ~~a~v~l~-~dG~v~v~~g~~e~GQG~~T~~aQiaAe~LGip~e~V~v~~~DT~~~p~~~gt~~Sr~t~~--~G~Av~~A 552 (770)
T TIGR02416 476 DSCEIRIH-PTGSAIARMGTKSQGQGHETTYAQIIATELGIPAEDIMVEEGDTDTAPYGLGTYGSRSTPV--AGAATALA 552 (770)
T ss_pred ceEEEEEC-CCceEEEEECCCCCCCCchHHHHHHHHHHHCCCHHHEEEEecCCCCCCCCCCCchhHHHHH--HHHHHHHH
Confidence 45667776 48999999999765 56678899999999999999854 4567888886532 22333444
Q ss_pred HHhCC
Q 000805 760 SFLLN 764 (1276)
Q Consensus 760 A~~~g 764 (1276)
|.+++
T Consensus 553 a~~l~ 557 (770)
T TIGR02416 553 ARKIK 557 (770)
T ss_pred HHHHH
Confidence 55553
No 71
>TIGR02965 xanthine_xdhB xanthine dehydrogenase, molybdopterin binding subunit. Members of the protein family are the molybdopterin-containing large subunit (or, in, eukaryotes, the molybdopterin-binding domain) of xanthine dehydrogenase, and enzyme that reduces the purine pool by catabolizing xanthine to urate. This model is based primarily on bacterial sequences; it does not manage to include all eukaryotic xanthine dehydrogenases and thereby discriminate them from the closely related enzyme aldehyde dehydrogenase.
Probab=68.52 E-value=7.6 Score=51.10 Aligned_cols=58 Identities=9% Similarity=0.138 Sum_probs=45.7
Q ss_pred CCCeeEEEEecCCCeEEEEeCCCCh-----HHHHHHHHHHhCCCCCcEEEEe------cccCCCCCCCCC
Q 000805 689 EPHSSVVWTMDHGNEVHMISSTQAP-----QKHQKYVSHVLGLPMSKVVCKT------KRIGGGFGGKET 747 (1276)
Q Consensus 689 Ep~~~~a~~~~~~g~l~V~~stQ~p-----~~~r~~vA~~Lglp~~kV~V~~------~~vGGgFGgK~~ 747 (1276)
.+..+....+ .||.++|+++++.. ..+...+|+.||+|.++|+|.. +.-+|.+|++.+
T Consensus 446 ~~~~a~v~i~-~dG~v~v~~g~~e~GQG~~T~laQIaAe~LGi~~d~V~v~~~DT~~~p~~~gT~gSr~t 514 (758)
T TIGR02965 446 NQAGALVHVY-TDGSIHLNHGGTEMGQGLNTKVAQVVAEEFQVDIDRVKITATDTDKVPNTSATAASSGS 514 (758)
T ss_pred CccceEEEEe-CCCcEEEEECCCCCCCCHHHHHHHHHHHHhCCCHHHEEEEecCccCCCCCCCCchHHHH
Confidence 3455677777 48899999999764 5567889999999999999985 456777888865
No 72
>PF02594 DUF167: Uncharacterised ACR, YggU family COG1872; InterPro: IPR003746 This entry describes proteins of unknown function. Structures for two of these proteins, YggU from Escherichia coli and MTH637 from the archaea Methanobacterium thermoautotrophicum, have been determined; they have a core 2-layer alpha/beta structure consisting of beta(2)-loop-alpha-beta(2)-alpha [, ].; PDB: 1YH5_A 1N91_A 1JRM_A.
Probab=58.92 E-value=33 Score=31.48 Aligned_cols=51 Identities=20% Similarity=0.256 Sum_probs=39.5
Q ss_pred EEEEEecCCeEEEEEcCccCCcchHHHHHHHHHHHhCCCcccEEEecCCCC
Q 000805 963 ALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETSTD 1013 (1276)
Q Consensus 963 a~V~l~~DGsV~V~~g~~e~GqG~~T~~~qiaAe~Lgip~~~V~v~~~dT~ 1013 (1276)
....++.||.+.|..-....--=-+..+....|+.||+|..+|.+..+.|.
T Consensus 18 ~i~~~~~~~~l~i~v~app~~GkAN~ali~~La~~l~v~ks~i~i~~G~~S 68 (77)
T PF02594_consen 18 AIVGVEGDGALKIRVTAPPVDGKANKALIRFLAKALGVPKSDIEIVSGHTS 68 (77)
T ss_dssp EEEEE-TTT-EEEEBSTTCCCCCHHHHHHHHHHHHCT--TTCEEECC-CCC
T ss_pred ccccccCceEEEEEEecCCCcChhHHHHHHHHHHHhCCCcccEEEEecCCC
Confidence 444677778999998888887779999999999999999999999987765
No 73
>PRK13904 murB UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=58.20 E-value=37 Score=38.59 Aligned_cols=145 Identities=14% Similarity=0.202 Sum_probs=89.4
Q ss_pred CcccccCCCeEEEecCCHHHHHHHHhcCCCcEEEEccchhhHHHHhCcCCCCeEEeCCCCCCCccEEEcCCeEEEccccc
Q 000805 168 PLNLSGFGGLKWYRPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVR 247 (1276)
Q Consensus 168 ~~~~~~~~~~~~~~P~sl~eal~ll~~~~~a~lvaGgTdl~v~~~~~~~~~~~lIdl~~i~EL~~I~~~~~~l~IGA~vT 247 (1276)
++.+ |..-.-|+.|.+.+ + .. ...++.+|+-+++. .+. ...+| + ..+++.|+.+++.|+.||++.
T Consensus 12 t~~i-GG~A~~~~~~~~~~-l-----~~-p~~vlG~GSNlLv~--D~g--~~~vv-~--~~~~~~~~~~~~~v~~~AG~~ 76 (257)
T PRK13904 12 SVKI-GPPLEVLVLEEIDD-F-----SQ-DGQIIGGANNLLIS--PNP--KNLAI-L--GKNFDYIKIDGECLEIGGATK 76 (257)
T ss_pred ceeE-CceEEEEEEechhh-h-----CC-CeEEEeceeEEEEe--cCC--ccEEE-E--ccCcCeEEEeCCEEEEEcCCc
Confidence 4555 55344567787776 4 22 47889999999873 222 34555 2 234777888888999999999
Q ss_pred HHHHHHHhhhhhhcCCccchhhHHHHHHHHHhhcCcccceeeeecccccc-cCC-CCCHHHHHHHcCCEEEEEeCCCcEE
Q 000805 248 LTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICT-ASP-ISDLNPLWMASGAKFHIVDCKGNIR 325 (1276)
Q Consensus 248 l~~l~~~l~~~~~~~~~~~~~~~~~L~~~~~~ias~qIRN~aTiGGNi~~-asp-~sD~~p~Llal~A~v~l~s~~g~~R 325 (1276)
+.++.....+ ..+ . -+..+++.+ |||||-+.+ |.- -.++.-+|. +|++.+ +
T Consensus 77 l~~l~~~~~~--~gl--------~----GlE~l~gIP----GtVGGAv~mNaGa~g~ei~d~l~----~V~~~~--~--- 129 (257)
T PRK13904 77 SGKIFNYAKK--NNL--------G----GFEFLGKLP----GTLGGLVKMNAGLKEYEISNNLE----SICTNG--G--- 129 (257)
T ss_pred HHHHHHHHHH--CCC--------c----hhhhhcCCC----ccHHHHHHhcCCcCccchheeEE----EEEEEe--e---
Confidence 9999886422 111 1 223344444 788887753 321 122222221 233332 2
Q ss_pred EEEhHhHhccCccccCCCceEEEEEEccCCC
Q 000805 326 TTMAEEFFLGYRKVDLTSGEILLSIFLPWTR 356 (1276)
Q Consensus 326 ~vpl~~F~~g~~~t~L~~~Eii~~I~iP~~~ 356 (1276)
+++-+|.--+||...++ ++|+++.+-..+
T Consensus 130 ~~~~~e~~f~YR~S~~~--~iIl~a~f~l~~ 158 (257)
T PRK13904 130 WIEKEDIGFGYRSSGIN--GVILEARFKKTH 158 (257)
T ss_pred EEeHHHCcccccCcCCC--cEEEEEEEEECC
Confidence 57888877799998886 488888876653
No 74
>PF10437 Lip_prot_lig_C: Bacterial lipoate protein ligase C-terminus; InterPro: IPR019491 This is the C-terminal domain of a bacterial lipoate protein ligase. There is no conservation between this C terminus and that of vertebrate lipoate protein ligase C-termini, but both are associated with IPR004143 from INTERPRO, further upstream. This C-terminal domain is more stable than IPR004143 from INTERPRO and the hypothesis is that the C-terminal domain has a role in recognising the lipoyl domain and/or transferring the lipoyl group onto it from the lipoyl-AMP intermediate. C-terminal fragments of length 172 to 193 amino acid residues are observed in the eubacterial enzymes whereas in their archaeal counterparts the C-terminal segment is significantly smaller, ranging in size from 87 to 107 amino acid residues. ; PDB: 1X2G_A 3A7R_A 3A7A_A 1X2H_C 1VQZ_A 3R07_C.
Probab=48.25 E-value=70 Score=29.69 Aligned_cols=53 Identities=13% Similarity=0.286 Sum_probs=39.2
Q ss_pred cccceEEEEEEecCCcceEEEEEEEEEecCCCcceeHHHHHHHhcCCCCCHHHHHHHHHHh
Q 000805 375 ALVNAGMRVYLEEKDEEWVVSDALLVYGGVAPLSLSAKKTKTFIVGKSWSQELLQNALKIL 435 (1276)
Q Consensus 375 a~v~~A~~~~~~~~~~~~~i~~~ria~Ggv~~~p~ra~~~E~~L~Gk~~~~~~l~~a~~~l 435 (1276)
..|.+ .+.++ +| +|++++|.==-+.... ..++|+.|.|.+++.+.+.++++.+
T Consensus 16 G~v~v--~~~V~-~G---~I~~i~i~gDf~~~~~--i~~le~~L~G~~~~~~~i~~~l~~~ 68 (86)
T PF10437_consen 16 GTVEV--HLNVK-NG---IIKDIKIYGDFFGPED--IEELEEALIGCPYDREAIKEALNSV 68 (86)
T ss_dssp EEEEE--EEEEE-TT---EEEEEEEEECBS-CCC--HHHHHHHHTTCBSSHHHHHHHHHHC
T ss_pred ceEEE--EEEEE-CC---EEEEEEEECCCCCchH--HHHHHHHHHhcCCCHHHHHHHHHHh
Confidence 44444 44555 46 9999999633333333 7899999999999999999999877
No 75
>PF08869 XisI: XisI protein; InterPro: IPR014968 The fdxN element, along with two other DNA elements, is excised from the chromosome during heterocyst differentiation in cyanobacteria. The xisH as well as the xisF and xisI genes are required []. ; PDB: 3D7Q_A 2NWV_A 2NVM_A 2NLV_B.
Probab=47.41 E-value=31 Score=33.94 Aligned_cols=39 Identities=26% Similarity=0.555 Sum_probs=29.7
Q ss_pred eeEEEEEe-cCCeEEEEEcCccCCcchHHHHHHHHHHHh---CCCcccEEEec
Q 000805 961 AGALVHVY-TDGTVLVTHGGVEMGQGLHTKVAQVAASAF---NIPLSSVFVSE 1009 (1276)
Q Consensus 961 ~~a~V~l~-~DGsV~V~~g~~e~GqG~~T~~~qiaAe~L---gip~~~V~v~~ 1009 (1276)
.++.++++ .||+|.|..-++|.| +|++| |||.++|-+.-
T Consensus 55 ~g~~iH~dI~dgKIWIq~d~TE~g----------Ia~eLve~GVpk~dIVLgF 97 (111)
T PF08869_consen 55 HGCLIHLDIKDGKIWIQRDGTEDG----------IAEELVEAGVPKEDIVLGF 97 (111)
T ss_dssp EEEEEEEEEETTEEEEEEESSSSH----------HHHHHHHTT--GGGEEETT
T ss_pred EEEEEEEEEECCeEEEEcCchhhH----------HHHHHHHcCCCHHHEEEcc
Confidence 46777777 799999999999988 34444 99999998863
No 76
>PRK00647 hypothetical protein; Validated
Probab=28.77 E-value=1.3e+02 Score=28.94 Aligned_cols=45 Identities=18% Similarity=0.152 Sum_probs=39.1
Q ss_pred cCCeEEEEEcCccCCcchHHHHHHHHHHHhCCCcccEEEecCCCC
Q 000805 969 TDGTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETSTD 1013 (1276)
Q Consensus 969 ~DGsV~V~~g~~e~GqG~~T~~~qiaAe~Lgip~~~V~v~~~dT~ 1013 (1276)
.+|.+.|..-..+.----+..+.+..|+.||+|..+|.|..+.|.
T Consensus 25 ~~~~Lkvrv~ApPvdGKAN~ali~~LAk~l~vpks~I~Iv~G~tS 69 (96)
T PRK00647 25 EGGILKVRVTEVPEKGKANDAVIALLAKFLSLPKRDVTLIAGETS 69 (96)
T ss_pred cCCEEEEEEecCCCCChHHHHHHHHHHHHhCCChhhEEEEecCCC
Confidence 357788888888877778999999999999999999999988765
No 77
>PTZ00397 macrophage migration inhibition factor-like protein; Provisional
Probab=26.09 E-value=58 Score=32.09 Aligned_cols=31 Identities=10% Similarity=0.270 Sum_probs=25.5
Q ss_pred cchHHHHHHHHHHHhCCCcccEEEecCCCCC
Q 000805 984 QGLHTKVAQVAASAFNIPLSSVFVSETSTDK 1014 (1276)
Q Consensus 984 qG~~T~~~qiaAe~Lgip~~~V~v~~~dT~~ 1014 (1276)
+-+...++..+++.||||+++|.|.-.+...
T Consensus 75 ~~l~~~i~~~l~~~lgi~~~rv~I~f~~~~~ 105 (116)
T PTZ00397 75 SSIAAAITKILASHLKVKSERVYIEFKDCSA 105 (116)
T ss_pred HHHHHHHHHHHHHHhCcCcccEEEEEEECCh
Confidence 3466778999999999999999998776544
No 78
>PTZ00450 macrophage migration inhibitory factor-like protein; Provisional
Probab=24.33 E-value=54 Score=32.44 Aligned_cols=28 Identities=18% Similarity=0.290 Sum_probs=24.2
Q ss_pred chHHHHHHHHHHHhCCCcccEEEecCCC
Q 000805 985 GLHTKVAQVAASAFNIPLSSVFVSETST 1012 (1276)
Q Consensus 985 G~~T~~~qiaAe~Lgip~~~V~v~~~dT 1012 (1276)
.+...++++..+.||||.++|.|.-.|.
T Consensus 76 ~~s~~i~~~l~~~LgIp~dRiYI~f~d~ 103 (113)
T PTZ00450 76 MMTPRITAAITKECGIPAERIYVFYYST 103 (113)
T ss_pred HHHHHHHHHHHHHcCCCcccEEEEEEcH
Confidence 4666789999999999999999998774
No 79
>PRK05090 hypothetical protein; Validated
Probab=23.65 E-value=1.8e+02 Score=27.89 Aligned_cols=45 Identities=11% Similarity=0.147 Sum_probs=38.2
Q ss_pred cCCeEEEEEcCccCCcchHHHHHHHHHHHhCCCcccEEEecCCCC
Q 000805 969 TDGTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETSTD 1013 (1276)
Q Consensus 969 ~DGsV~V~~g~~e~GqG~~T~~~qiaAe~Lgip~~~V~v~~~dT~ 1013 (1276)
.+|.+.|...+...--=-+..+....|+.||+|..+|.+..+.|.
T Consensus 30 ~~~~lkv~v~ApPveGkAN~ali~~LAk~l~v~ks~I~i~~G~ts 74 (95)
T PRK05090 30 HGDELKVAITAPPVDGQANAHLLKFLAKQFRVAKSQVVIEKGELG 74 (95)
T ss_pred cCCEEEEEEecCCCCChHHHHHHHHHHHHhCCChhhEEEEecCCC
Confidence 467788887777776668899999999999999999999988765
No 80
>PRK01530 hypothetical protein; Reviewed
Probab=22.41 E-value=1.9e+02 Score=28.36 Aligned_cols=44 Identities=7% Similarity=0.052 Sum_probs=36.8
Q ss_pred CCeEEEEEcCccCCcchHHHHHHHHHHHhCCCcccEEEecCCCC
Q 000805 970 DGTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETSTD 1013 (1276)
Q Consensus 970 DGsV~V~~g~~e~GqG~~T~~~qiaAe~Lgip~~~V~v~~~dT~ 1013 (1276)
+|.+.|..-+.+.--=.+..+....|+.||||..+|.+..+.|.
T Consensus 38 ~~~Lki~v~ApPvdGkAN~ali~~LAk~l~v~ks~I~IvsG~tS 81 (105)
T PRK01530 38 IPYLKLSIKAIPEQGKANEEIINYLAKEWKLSRSNIEIIKGHTH 81 (105)
T ss_pred CCEEEEEEecCCCCChHHHHHHHHHHHHhCCChhhEEEEecCCC
Confidence 45677777776666568889999999999999999999988765
Done!