BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 000807
(1276 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2CKJ|A Chain A, Human Milk Xanthine Oxidoreductase
pdb|2CKJ|B Chain B, Human Milk Xanthine Oxidoreductase
pdb|2CKJ|C Chain C, Human Milk Xanthine Oxidoreductase
pdb|2CKJ|D Chain D, Human Milk Xanthine Oxidoreductase
Length = 1333
Score = 1066 bits (2758), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 571/1257 (45%), Positives = 777/1257 (61%), Gaps = 57/1257 (4%)
Query: 21 LQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLAGNLCRCTGYRPIVDA 80
+QE + +SHGSQCGFCTPG +MSMY+LLR+ Q PT E+IE + GNLCRCTGYRPI+
Sbjct: 101 VQERIAKSHGSQCGFCTPGIVMSMYTLLRN-QPEPTMEEIENAFQGNLCRCTGYRPILQG 159
Query: 81 FRVFAKTNDALYTNMSSMSLKEGEFVCPSTGKPCSCGMKNVSNADTCEKSVACGKTYEPV 140
FR FA+ + ++ P C + ++ + S+ ++P
Sbjct: 160 FRTFARDGGCCGGDGNN---------------PNCCMNQKKDHSVSLSPSL-----FKPE 199
Query: 141 SYSEIDGSTYTEKELIFPPELLLRKSNPLNLSGFGG--LKWYRPLKLQHLLELKSKYPDS 198
++ +D + +E IFPPELL K P F G + W + L+ LL+LK+++PD+
Sbjct: 200 EFTPLDPT----QEPIFPPELLRLKDTPRKQLRFEGERVTWIQASTLKELLDLKAQHPDA 255
Query: 199 KLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELLKMFRKV 258
KL+VGNTE+GIEM+ K M + +++ +PELN + DG+ GAA L+ + K
Sbjct: 256 KLVVGNTEIGIEMKFKNMLFPMIVCPAWIPELNSVEHGPDGISFGAACPLSIVEKTLVDA 315
Query: 259 VTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPLWMASGAKFHIV 318
V + PA +T + +EQ++WFAG Q+K+VASVGGNI TASPISDLNP++MASGAK +V
Sbjct: 316 VAKLPAQKTEVFRGVLEQLRWFAGKQVKSVASVGGNIITASPISDLNPVFMASGAKLTLV 375
Query: 319 DCKGNIRTT-MAEEFFLGYRKVDLTSGEILLSIFLPWTRPFEFVKEFKQAHRRDDDIALV 377
+G RT M FF GYRK L+ EILLSI +P++R E+ FKQA RR+DDIA V
Sbjct: 376 S-RGTRRTVQMDHTFFPGYRKTLLSPEEILLSIEIPYSREGEYFSAFKQASRREDDIAKV 434
Query: 378 NAGMRVYLEEKDEEWVVSDALLVYGGVAPLSLSAKKTKTFIVGKSWSQELLQNALKILQT 437
+GMRV + E V + L YGG+A ++SA KT + K W +ELLQ+ L
Sbjct: 435 TSGMRVLFKPGTTE--VQELALCYGGMANRTISALKTTQRQLSKLWKEELLQDVCAGLAE 492
Query: 438 DIILKEDAPGGMVDXXXXXXXXXXXXXXXWVSHQMEGKNSIKES---VPSTHLSAMQSFH 494
++ L DAPGGMVD V ++ G+ ++++ + T SA F
Sbjct: 493 ELHLPPDAPGGMVDFRCTLTLSFFFKFYLTVLQKL-GQENLEDKCGKLDPTFASATLLFQ 551
Query: 495 RPSIIGNQDYEITKHGTS----VGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLS 550
+ Q ++ G S VG P HL++ +Q +GEA Y DD P N L LV S
Sbjct: 552 KDPPADVQLFQEVPKGQSEEDMVGRPLPHLAADMQASGEAVYCDDIPRYENELSLRLVTS 611
Query: 551 RRPHARILSIDDSGARSSPGFVGIFFAEDVQGDNRIGPVVADEELFASEXXXXXXXXXXX 610
R HA+I SID S A+ PGFV A+DV G N G + DE +FA +
Sbjct: 612 TRAHAKIKSIDTSEAKKVPGFVCFISADDVPGSNITG-ICNDETVFAKDKVTCVGHIIGA 670
Query: 611 XXAETHEEAKLASRKVQVEYEELPAILSIQEAIDAKSFHPNTERCFRKGDVDICFQSGQC 670
A+T E + A++ V++ YEELPAI++I++AI SF+ E KGD+ F +
Sbjct: 671 VVADTPEHTQRAAQGVKITYEELPAIITIEDAIKNNSFY-GPELKIEKGDLKKGFS--EA 727
Query: 671 DKIIEGEVRVGGQEHFYLEPHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSK 730
D ++ GE+ +GGQEHFYLE H ++ E+ + STQ K Q +V+ +LG+P ++
Sbjct: 728 DNVVSGEIYIGGQEHFYLETHCTIAVPKGEAGEMELFVSTQNTMKTQSFVAKMLGVPANR 787
Query: 731 VVCKTKRIGGGFGGKETRSAFIXXXXXVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKY 790
+V + KR+GGGFGGKETRS + + ++ RPV LDRD DM+I+G RH FL +Y
Sbjct: 788 IVVRVKRMGGGFGGKETRSTVVSTAVALAAYKTGRPVRCMLDRDEDMLITGGRHPFLARY 847
Query: 791 KVGFTNEGKVLALDLEIYNNAGNSLDLSLAVLERAMFHSDNVYEIPNVRIMGNVCFTNFP 850
KVGF G V+AL+++ ++N GN+ DLS +++ERA+FH DN Y+IPN+R G +C TN P
Sbjct: 848 KVGFMKTGTVVALEVDHFSNVGNTQDLSQSIMERALFHMDNCYKIPNIRGTGRLCKTNLP 907
Query: 851 SNTAFRGFGGPQGMLITENWIQRVAVEVRKSPEEIREINFQGEGSILHYGQQLQHCTLFP 910
SNTAFRGFGGPQGMLI E W+ VAV EE+R N EG + H+ Q+L+ TL
Sbjct: 908 SNTAFRGFGGPQGMLIAECWMSEVAVTCGMPAEEVRRKNLYKEGDLTHFNQKLEGFTLPR 967
Query: 911 LWNELKLSCDFLNARKEVDNFNLNNRWKKRGIAMVPTKFGISFTLKLMNQAGALVHVYTD 970
W E S + + EVD FN N WKKRG+ ++PTKFGISFT+ +NQAGAL+HVYTD
Sbjct: 968 CWEECLASSQYHARKSEVDKFNKENCWKKRGLCIIPTKFGISFTVPFLNQAGALLHVYTD 1027
Query: 971 GTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETSTDKVPNXXXXXXXXXXDIY 1030
G+VL+THGG EMGQGLHTK+ QVA+ A IP S +++SETST+ VPN D+
Sbjct: 1028 GSVLLTHGGTEMGQGLHTKMVQVASRALKIPTSKIYISETSTNTVPNTSPTAASVSADLN 1087
Query: 1031 GAAVLDACEQIKARMEPIASKHNFNSFAELASACYVQRIDLSAHGFYITPEIDFDWITGK 1090
G AV AC+ I R+EP K+ S+ + +A Y+ + LSA GFY TP + + + T
Sbjct: 1088 GQAVYAACQTILKRLEPYKKKNPSGSWEDWVTAAYMDTVSLSATGFYRTPNLGYSFETNS 1147
Query: 1091 GNPFRYFTYGAAFAEVEIDTLTGDFHTRMANVILDLGYSLNPAIDVGQIEGAFIQGLGWL 1150
GNPF YF+YG A +EVEID LTGD ++++D+G SLNPAID+GQ+EGAF+QGLG
Sbjct: 1148 GNPFHYFSYGVACSEVEIDCLTGDHKNLRTDIVMDVGSSLNPAIDIGQVEGAFVQGLGLF 1207
Query: 1151 ALEELKWGDAAHKWIPPGCLYTCGPGSYKIPSLNDVPLKFNVSLLKGHPNVKAIHSSKAV 1210
LEEL + P G L+T GP +YKIP+ +P++F VSLL+ PN KAI++SKAV
Sbjct: 1208 TLEELHYS-------PEGSLHTRGPSTYKIPAFGSIPIEFRVSLLRDCPNKKAIYASKAV 1260
Query: 1211 GEPPFFLASSVFFAIKDAISAARADAGHTG-----WFPLDNPATPERIRMACLDEFT 1262
GEPP FLA+S+FFAIKDAI AARA HTG F LD+PATPE+IR AC+D+FT
Sbjct: 1261 GEPPLFLAASIFFAIKDAIRAARAQ--HTGNNVKELFRLDSPATPEKIRNACVDKFT 1315
>pdb|2E1Q|A Chain A, Crystal Structure Of Human Xanthine Oxidoreductase Mutant,
Glu803val
pdb|2E1Q|B Chain B, Crystal Structure Of Human Xanthine Oxidoreductase Mutant,
Glu803val
pdb|2E1Q|C Chain C, Crystal Structure Of Human Xanthine Oxidoreductase Mutant,
Glu803val
pdb|2E1Q|D Chain D, Crystal Structure Of Human Xanthine Oxidoreductase Mutant,
Glu803val
Length = 1333
Score = 1064 bits (2751), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 570/1257 (45%), Positives = 776/1257 (61%), Gaps = 57/1257 (4%)
Query: 21 LQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLAGNLCRCTGYRPIVDA 80
+QE + +SHGSQCGFCTPG +MSMY+LLR+ Q PT E+IE + GNLCRCTGYRPI+
Sbjct: 101 VQERIAKSHGSQCGFCTPGIVMSMYTLLRN-QPEPTMEEIENAFQGNLCRCTGYRPILQG 159
Query: 81 FRVFAKTNDALYTNMSSMSLKEGEFVCPSTGKPCSCGMKNVSNADTCEKSVACGKTYEPV 140
FR FA+ + ++ P C + ++ + S+ ++P
Sbjct: 160 FRTFARDGGCCGGDGNN---------------PNCCMNQKKDHSVSLSPSL-----FKPE 199
Query: 141 SYSEIDGSTYTEKELIFPPELLLRKSNPLNLSGFGG--LKWYRPLKLQHLLELKSKYPDS 198
++ +D + +E IFPPELL K P F G + W + L+ LL+LK+++PD+
Sbjct: 200 EFTPLDPT----QEPIFPPELLRLKDTPRKQLRFEGERVTWIQASTLKELLDLKAQHPDA 255
Query: 199 KLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELLKMFRKV 258
KL+VGNTE+GIEM+ K M + +++ +PELN + DG+ GAA L+ + K
Sbjct: 256 KLVVGNTEIGIEMKFKNMLFPMIVCPAWIPELNSVEHGPDGISFGAACPLSIVEKTLVDA 315
Query: 259 VTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPLWMASGAKFHIV 318
V + PA +T + +EQ++WFAG Q+K+VASVGGNI TASPISDLNP++MASGAK +V
Sbjct: 316 VAKLPAQKTEVFRGVLEQLRWFAGKQVKSVASVGGNIITASPISDLNPVFMASGAKLTLV 375
Query: 319 DCKGNIRTT-MAEEFFLGYRKVDLTSGEILLSIFLPWTRPFEFVKEFKQAHRRDDDIALV 377
+G RT M FF GYRK L+ EILLSI +P++R E+ FKQA RR+DDIA V
Sbjct: 376 S-RGTRRTVQMDHTFFPGYRKTLLSPEEILLSIEIPYSREGEYFSAFKQASRREDDIAKV 434
Query: 378 NAGMRVYLEEKDEEWVVSDALLVYGGVAPLSLSAKKTKTFIVGKSWSQELLQNALKILQT 437
+GMRV + E V + L YGG+A ++SA KT + K W +ELLQ+ L
Sbjct: 435 TSGMRVLFKPGTTE--VQELALCYGGMANRTISALKTTQRQLSKLWKEELLQDVCAGLAE 492
Query: 438 DIILKEDAPGGMVDXXXXXXXXXXXXXXXWVSHQMEGKNSIKES---VPSTHLSAMQSFH 494
++ L DAPGGMVD V ++ G+ ++++ + T SA F
Sbjct: 493 ELHLPPDAPGGMVDFRCTLTLSFFFKFYLTVLQKL-GQENLEDKCGKLDPTFASATLLFQ 551
Query: 495 RPSIIGNQDYEITKHGTS----VGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLS 550
+ Q ++ G S VG P HL++ +Q +GEA Y DD P N L LV S
Sbjct: 552 KDPPADVQLFQEVPKGQSEEDMVGRPLPHLAADMQASGEAVYCDDIPRYENELSLRLVTS 611
Query: 551 RRPHARILSIDDSGARSSPGFVGIFFAEDVQGDNRIGPVVADEELFASEXXXXXXXXXXX 610
R HA+I SID S A+ PGFV A+DV G N G + DE +FA +
Sbjct: 612 TRAHAKIKSIDTSEAKKVPGFVCFISADDVPGSNITG-ICNDETVFAKDKVTCVGHIIGA 670
Query: 611 XXAETHEEAKLASRKVQVEYEELPAILSIQEAIDAKSFHPNTERCFRKGDVDICFQSGQC 670
A+T E + A++ V++ YEELPAI++I++AI SF+ E KGD+ F +
Sbjct: 671 VVADTPEHTQRAAQGVKITYEELPAIITIEDAIKNNSFY-GPELKIEKGDLKKGFS--EA 727
Query: 671 DKIIEGEVRVGGQEHFYLEPHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSK 730
D ++ GE+ +GGQEHFYLE H ++ E+ + STQ K Q +V+ +LG+P ++
Sbjct: 728 DNVVSGEIYIGGQEHFYLETHCTIAVPKGEAGEMELFVSTQNTMKTQSFVAKMLGVPANR 787
Query: 731 VVCKTKRIGGGFGGKETRSAFIXXXXXVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKY 790
+V + KR+GGGFGGK TRS + + ++ RPV LDRD DM+I+G RH FL +Y
Sbjct: 788 IVVRVKRMGGGFGGKVTRSTVVSTAVALAAYKTGRPVRCMLDRDEDMLITGGRHPFLARY 847
Query: 791 KVGFTNEGKVLALDLEIYNNAGNSLDLSLAVLERAMFHSDNVYEIPNVRIMGNVCFTNFP 850
KVGF G V+AL+++ ++N GN+ DLS +++ERA+FH DN Y+IPN+R G +C TN P
Sbjct: 848 KVGFMKTGTVVALEVDHFSNVGNTQDLSQSIMERALFHMDNCYKIPNIRGTGRLCKTNLP 907
Query: 851 SNTAFRGFGGPQGMLITENWIQRVAVEVRKSPEEIREINFQGEGSILHYGQQLQHCTLFP 910
SNTAFRGFGGPQGMLI E W+ VAV EE+R N EG + H+ Q+L+ TL
Sbjct: 908 SNTAFRGFGGPQGMLIAECWMSEVAVTCGMPAEEVRRKNLYKEGDLTHFNQKLEGFTLPR 967
Query: 911 LWNELKLSCDFLNARKEVDNFNLNNRWKKRGIAMVPTKFGISFTLKLMNQAGALVHVYTD 970
W E S + + EVD FN N WKKRG+ ++PTKFGISFT+ +NQAGAL+HVYTD
Sbjct: 968 CWEECLASSQYHARKSEVDKFNKENCWKKRGLCIIPTKFGISFTVPFLNQAGALLHVYTD 1027
Query: 971 GTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETSTDKVPNXXXXXXXXXXDIY 1030
G+VL+THGG EMGQGLHTK+ QVA+ A IP S +++SETST+ VPN D+
Sbjct: 1028 GSVLLTHGGTEMGQGLHTKMVQVASRALKIPTSKIYISETSTNTVPNTSPTAASVSADLN 1087
Query: 1031 GAAVLDACEQIKARMEPIASKHNFNSFAELASACYVQRIDLSAHGFYITPEIDFDWITGK 1090
G AV AC+ I R+EP K+ S+ + +A Y+ + LSA GFY TP + + + T
Sbjct: 1088 GQAVYAACQTILKRLEPYKKKNPSGSWEDWVTAAYMDTVSLSATGFYRTPNLGYSFETNS 1147
Query: 1091 GNPFRYFTYGAAFAEVEIDTLTGDFHTRMANVILDLGYSLNPAIDVGQIEGAFIQGLGWL 1150
GNPF YF+YG A +EVEID LTGD ++++D+G SLNPAID+GQ+EGAF+QGLG
Sbjct: 1148 GNPFHYFSYGVACSEVEIDCLTGDHKNLRTDIVMDVGSSLNPAIDIGQVEGAFVQGLGLF 1207
Query: 1151 ALEELKWGDAAHKWIPPGCLYTCGPGSYKIPSLNDVPLKFNVSLLKGHPNVKAIHSSKAV 1210
LEEL + P G L+T GP +YKIP+ +P++F VSLL+ PN KAI++SKAV
Sbjct: 1208 TLEELHYS-------PEGSLHTRGPSTYKIPAFGSIPIEFRVSLLRDCPNKKAIYASKAV 1260
Query: 1211 GEPPFFLASSVFFAIKDAISAARADAGHTG-----WFPLDNPATPERIRMACLDEFT 1262
GEPP FLA+S+FFAIKDAI AARA HTG F LD+PATPE+IR AC+D+FT
Sbjct: 1261 GEPPLFLAASIFFAIKDAIRAARAQ--HTGNNVKELFRLDSPATPEKIRNACVDKFT 1315
>pdb|1WYG|A Chain A, Crystal Structure Of A Rat Xanthine Dehydrogenase Triple
Mutant (C535a, C992r And C1324s)
Length = 1331
Score = 1050 bits (2714), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 561/1254 (44%), Positives = 766/1254 (61%), Gaps = 52/1254 (4%)
Query: 21 LQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLAGNLCRCTGYRPIVDA 80
+QE + RSHGSQCGFCTPG +MSMY+LLR+ Q PT E+IE + GNLCRCTGYRPI+
Sbjct: 100 VQERIARSHGSQCGFCTPGIVMSMYTLLRN-QPEPTVEEIENAFQGNLCRCTGYRPILQG 158
Query: 81 FRVFAKTNDALYTNMSSMSLKEGEFVCPSTGKPCSCGMKNVSNADTCEKSVACGKTYEPV 140
FR FAK + ++ P C + + S+ + P
Sbjct: 159 FRTFAKDGGCCGGSGNN---------------PNCCMNQTKDQTVSLSPSL-----FNPE 198
Query: 141 SYSEIDGSTYTEKELIFPPELLLRKSNPLNLSGFGG--LKWYRPLKLQHLLELKSKYPDS 198
+ +D + +E IFPPELL K P F G + W + ++ LL+LK+++PD+
Sbjct: 199 DFKPLDPT----QEPIFPPELLRLKDTPQKKLRFEGERVTWIQASTMEELLDLKAQHPDA 254
Query: 199 KLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELLKMFRKV 258
KL+VGNTE+GIEM+ K M + +++ +PELN + +G+ GA+ L+ + + +
Sbjct: 255 KLVVGNTEIGIEMKFKNMLFPLIVCPAWIPELNSVVHGPEGISFGASCPLSLVESVLAEE 314
Query: 259 VTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPLWMASGAKFHIV 318
+ + P +T + +EQ++WFAG Q+K+VAS+GGNI TASPISDLNP++MASGAK +V
Sbjct: 315 IAKLPEQKTEVFRGVMEQLRWFAGKQVKSVASIGGNIITASPISDLNPVFMASGAKLTLV 374
Query: 319 DCKGNIRTT-MAEEFFLGYRKVDLTSGEILLSIFLPWTRPFEFVKEFKQAHRRDDDIALV 377
+G RT M FF GYRK L EILLSI +P+++ EF FKQA RR+DDIA V
Sbjct: 375 S-RGTRRTVRMDHTFFPGYRKTLLRPEEILLSIEIPYSKEGEFFSAFKQASRREDDIAKV 433
Query: 378 NAGMRVYLEEKDEEWVVSDALLVYGGVAPLSLSAKKTKTFIVGKSWSQELLQNALKILQT 437
+GMRV + E V + L +GG+A ++SA KT + KSW++ELLQ+ L
Sbjct: 434 TSGMRVLFKPGTIE--VQELSLCFGGMADRTISALKTTPKQLSKSWNEELLQSVCAGLAE 491
Query: 438 DIILKEDAPGGMVDXXXXXXXXXXXXXXXWVSHQMEGKNSIKE---SVPSTHLSAMQSFH 494
++ L DAPGGMV+ V ++ G+ +++ + T SA F
Sbjct: 492 ELQLAPDAPGGMVEFRRTLTLSFFFKFYLTVLQKL-GRADLEDMAGKLDPTFASATLLFQ 550
Query: 495 RPSIIGNQDYEITKHGTS----VGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLS 550
+ Q ++ S VG P HL++ +Q +GEA Y DD P N L LV S
Sbjct: 551 KDPPANVQLFQEVPKDQSEEDMVGRPLPHLAANMQASGEAVYCDDIPRYENELSLRLVTS 610
Query: 551 RRPHARILSIDDSGARSSPGFVGIFFAEDVQGDNRIGPVVADEELFASEXXXXXXXXXXX 610
R HA+I SID S A+ PGFV AEDV N G + DE +FA +
Sbjct: 611 TRAHAKITSIDTSEAKKVPGFVCFLTAEDVPNSNATG-LFNDETVFAKDEVTCVGHIIGA 669
Query: 611 XXAETHEEAKLASRKVQVEYEELPAILSIQEAIDAKSFHPNTERCFRKGDVDICFQSGQC 670
A+T E A+ A+R V++ YE+LPAI++IQ+AI+ SF+ +E KGD+ F +
Sbjct: 670 VVADTPEHAQRAARGVKITYEDLPAIITIQDAINNNSFY-GSEIKIEKGDLKKGFS--EA 726
Query: 671 DKIIEGEVRVGGQEHFYLEPHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSK 730
D ++ GE+ +GGQEHFYLE + ++ E+ + STQ K Q +V+ +LG+P ++
Sbjct: 727 DNVVSGELYIGGQEHFYLETNCTIAVPKGEAGEMELFVSTQNTMKTQSFVAKMLGVPDNR 786
Query: 731 VVCKTKRIGGGFGGKETRSAFIXXXXXVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKY 790
+V + KR+GGGFGGKETRS + + + RPV LDRD DM+I+G RH FL KY
Sbjct: 787 IVVRVKRMGGGFGGKETRSTVVSTALALAAHKTGRPVRCMLDRDEDMLITGGRHPFLAKY 846
Query: 791 KVGFTNEGKVLALDLEIYNNAGNSLDLSLAVLERAMFHSDNVYEIPNVRIMGNVCFTNFP 850
KVGF G V+AL++ ++N GN+ DLS +++ERA+FH DN Y+IPN+R G +C TN P
Sbjct: 847 KVGFMKTGTVVALEVAHFSNGGNTEDLSRSIMERALFHMDNAYKIPNIRGTGRICKTNLP 906
Query: 851 SNTAFRGFGGPQGMLITENWIQRVAVEVRKSPEEIREINFQGEGSILHYGQQLQHCTLFP 910
SNTAFRGFGGPQGMLI E W+ VA+ EE+R N EG + H+ Q+L+ TL
Sbjct: 907 SNTAFRGFGGPQGMLIAEYWMSEVAITCGLPAEEVRRKNMYKEGDLTHFNQKLEGFTLPR 966
Query: 911 LWNELKLSCDFLNARKEVDNFNLNNRWKKRGIAMVPTKFGISFTLKLMNQAGALVHVYTD 970
W+E S +L ++EV+ FN NRWKKRG+ ++PTKFGISFTL +NQ GALVHVYTD
Sbjct: 967 CWDECIASSQYLARKREVEKFNRENRWKKRGLCIIPTKFGISFTLPFLNQGGALVHVYTD 1026
Query: 971 GTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETSTDKVPNXXXXXXXXXXDIY 1030
G+VL+THGG EMGQGLHTK+ QVA+ A IP S + +SETST+ VPN D+
Sbjct: 1027 GSVLLTHGGTEMGQGLHTKMVQVASRALKIPTSKIHISETSTNTVPNTSPTAASASADLN 1086
Query: 1031 GAAVLDACEQIKARMEPIASKHNFNSFAELASACYVQRIDLSAHGFYITPEIDFDWITGK 1090
G V +AC+ I R+EP K + Y + LSA GFY TP + + + T
Sbjct: 1087 GQGVYEACQTILKRLEPFKKKKPTGPWEAWVMDAYTSAVSLSATGFYKTPNLGYSFETNS 1146
Query: 1091 GNPFRYFTYGAAFAEVEIDTLTGDFHTRMANVILDLGYSLNPAIDVGQIEGAFIQGLGWL 1150
GNPF YF+YG A +EVEID LTGD ++++D+G SLNPAID+GQ+EGAF+QGLG
Sbjct: 1147 GNPFHYFSYGVACSEVEIDCLTGDHKNLRTDIVMDVGSSLNPAIDIGQVEGAFVQGLGLF 1206
Query: 1151 ALEELKWGDAAHKWIPPGCLYTCGPGSYKIPSLNDVPLKFNVSLLKGHPNVKAIHSSKAV 1210
+EEL + P G L+T GP +YKIP+ +P++F VSLL+ PN +AI++SKAV
Sbjct: 1207 TMEELHYS-------PEGSLHTRGPSTYKIPAFGSIPIEFRVSLLRDCPNKRAIYASKAV 1259
Query: 1211 GEPPFFLASSVFFAIKDAISAARADAGHTG--WFPLDNPATPERIRMACLDEFT 1262
GEPP FLASS+FFAIKDAI AARA G F LD+PATPE+IR AC+D+FT
Sbjct: 1260 GEPPLFLASSIFFAIKDAIRAARAQHGDNAKQLFQLDSPATPEKIRNACVDQFT 1313
>pdb|3AN1|A Chain A, Crystal Structure Of Rat D428a Mutant, Urate Bound Form
pdb|3AN1|B Chain B, Crystal Structure Of Rat D428a Mutant, Urate Bound Form
Length = 1331
Score = 1043 bits (2698), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 559/1254 (44%), Positives = 764/1254 (60%), Gaps = 52/1254 (4%)
Query: 21 LQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLAGNLCRCTGYRPIVDA 80
+QE + RSHGSQCGFCTPG +MSMY+LLR+ Q PT E+IE + GNLCRCTGYRPI+
Sbjct: 100 VQERIARSHGSQCGFCTPGIVMSMYTLLRN-QPEPTVEEIENAFQGNLCRCTGYRPILQG 158
Query: 81 FRVFAKTNDALYTNMSSMSLKEGEFVCPSTGKPCSCGMKNVSNADTCEKSVACGKTYEPV 140
FR FAK + ++ P C + + S+ + P
Sbjct: 159 FRTFAKDGGCCGGSGNN---------------PNCCMNQTKDQTVSLSPSL-----FNPE 198
Query: 141 SYSEIDGSTYTEKELIFPPELLLRKSNPLNLSGFGG--LKWYRPLKLQHLLELKSKYPDS 198
+ +D + +E IFPPELL K P F G + W + ++ LL+LK+++PD+
Sbjct: 199 DFKPLDPT----QEPIFPPELLRLKDTPQKKLRFEGERVTWIQASTMEELLDLKAQHPDA 254
Query: 199 KLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELLKMFRKV 258
KL+VGNTE+GIEM+ K M + +++ +PELN + +G+ GA+ L+ + + +
Sbjct: 255 KLVVGNTEIGIEMKFKNMLFPLIVCPAWIPELNSVVHGPEGISFGASCPLSLVESVLAEE 314
Query: 259 VTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPLWMASGAKFHIV 318
+ + P +T + +EQ++WFAG Q+K+VAS+GGNI TASPISDLNP++MASGAK +V
Sbjct: 315 IAKLPEQKTEVFRGVMEQLRWFAGKQVKSVASIGGNIITASPISDLNPVFMASGAKLTLV 374
Query: 319 DCKGNIRTT-MAEEFFLGYRKVDLTSGEILLSIFLPWTRPFEFVKEFKQAHRRDDDIALV 377
+G RT M FF GYRK L EILLSI +P+++ EF FKQA RR+ DIA V
Sbjct: 375 S-RGTRRTVRMDHTFFPGYRKTLLRPEEILLSIEIPYSKEGEFFSAFKQASRREADIAKV 433
Query: 378 NAGMRVYLEEKDEEWVVSDALLVYGGVAPLSLSAKKTKTFIVGKSWSQELLQNALKILQT 437
+GMRV + E V + L +GG+A ++SA KT + KSW++ELLQ+ L
Sbjct: 434 TSGMRVLFKPGTIE--VQELSLCFGGMADRTISALKTTPKQLSKSWNEELLQSVCAGLAE 491
Query: 438 DIILKEDAPGGMVDXXXXXXXXXXXXXXXWVSHQMEGKNSIKE---SVPSTHLSAMQSFH 494
++ L DAPGGMV+ V ++ G+ +++ + T SA F
Sbjct: 492 ELQLAPDAPGGMVEFRRTLTLSFFFKFYLTVLQKL-GRADLEDMCGKLDPTFASATLLFQ 550
Query: 495 RPSIIGNQDYEITKHGTS----VGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLS 550
+ Q ++ S VG P HL++ +Q +GEA Y DD P N L LV S
Sbjct: 551 KDPPANVQLFQEVPKDQSEEDMVGRPLPHLAANMQASGEAVYCDDIPRYENELSLRLVTS 610
Query: 551 RRPHARILSIDDSGARSSPGFVGIFFAEDVQGDNRIGPVVADEELFASEXXXXXXXXXXX 610
R HA+I SID S A+ PGFV AEDV N G + DE +FA +
Sbjct: 611 TRAHAKITSIDTSEAKKVPGFVCFLTAEDVPNSNATG-LFNDETVFAKDEVTCVGHIIGA 669
Query: 611 XXAETHEEAKLASRKVQVEYEELPAILSIQEAIDAKSFHPNTERCFRKGDVDICFQSGQC 670
A+T E A+ A+R V++ YE+LPAI++IQ+AI+ SF+ +E KGD+ F +
Sbjct: 670 VVADTPEHAQRAARGVKITYEDLPAIITIQDAINNNSFY-GSEIKIEKGDLKKGFS--EA 726
Query: 671 DKIIEGEVRVGGQEHFYLEPHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSK 730
D ++ GE+ +GGQEHFYLE + ++ E+ + STQ K Q +V+ +LG+P ++
Sbjct: 727 DNVVSGELYIGGQEHFYLETNCTIAVPKGEAGEMELFVSTQNTMKTQSFVAKMLGVPDNR 786
Query: 731 VVCKTKRIGGGFGGKETRSAFIXXXXXVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKY 790
+V + KR+GGGFGGKETRS + + + RPV LDRD DM+I+G RH FL KY
Sbjct: 787 IVVRVKRMGGGFGGKETRSTVVSTALALAAHKTGRPVRCMLDRDEDMLITGGRHPFLAKY 846
Query: 791 KVGFTNEGKVLALDLEIYNNAGNSLDLSLAVLERAMFHSDNVYEIPNVRIMGNVCFTNFP 850
KVGF G V+AL++ ++N GN+ DLS +++ERA+FH DN Y+IPN+R G +C TN P
Sbjct: 847 KVGFMKTGTVVALEVAHFSNGGNTEDLSRSIMERALFHMDNAYKIPNIRGTGRICKTNLP 906
Query: 851 SNTAFRGFGGPQGMLITENWIQRVAVEVRKSPEEIREINFQGEGSILHYGQQLQHCTLFP 910
SNTAFRGFGGPQGMLI E W+ VA+ EE+R N EG + H+ Q+L+ TL
Sbjct: 907 SNTAFRGFGGPQGMLIAEYWMSEVAITCGLPAEEVRRKNMYKEGDLTHFNQKLEGFTLPR 966
Query: 911 LWNELKLSCDFLNARKEVDNFNLNNRWKKRGIAMVPTKFGISFTLKLMNQAGALVHVYTD 970
W+E S +L ++EV+ FN N WKKRG+ ++PTKFGISFTL +NQ GALVHVYTD
Sbjct: 967 CWDECIASSQYLARKREVEKFNRENCWKKRGLCIIPTKFGISFTLPFLNQGGALVHVYTD 1026
Query: 971 GTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETSTDKVPNXXXXXXXXXXDIY 1030
G+VL+THGG EMGQGLHTK+ QVA+ A IP S + +SETST+ VPN D+
Sbjct: 1027 GSVLLTHGGTEMGQGLHTKMVQVASRALKIPTSKIHISETSTNTVPNTSPTAASASADLN 1086
Query: 1031 GAAVLDACEQIKARMEPIASKHNFNSFAELASACYVQRIDLSAHGFYITPEIDFDWITGK 1090
G V +AC+ I R+EP K + Y + LSA GFY TP + + + T
Sbjct: 1087 GQGVYEACQTILKRLEPFKKKKPTGPWEAWVMDAYTSAVSLSATGFYKTPNLGYSFETNS 1146
Query: 1091 GNPFRYFTYGAAFAEVEIDTLTGDFHTRMANVILDLGYSLNPAIDVGQIEGAFIQGLGWL 1150
GNPF YF+YG A +EVEID LTGD ++++D+G SLNPAID+GQ+EGAF+QGLG
Sbjct: 1147 GNPFHYFSYGVACSEVEIDCLTGDHKNLRTDIVMDVGSSLNPAIDIGQVEGAFVQGLGLF 1206
Query: 1151 ALEELKWGDAAHKWIPPGCLYTCGPGSYKIPSLNDVPLKFNVSLLKGHPNVKAIHSSKAV 1210
+EEL + P G L+T GP +YKIP+ +P++F VSLL+ PN +AI++SKAV
Sbjct: 1207 TMEELHYS-------PEGSLHTRGPSTYKIPAFGSIPIEFRVSLLRDCPNKRAIYASKAV 1259
Query: 1211 GEPPFFLASSVFFAIKDAISAARADAGHTG--WFPLDNPATPERIRMACLDEFT 1262
GEPP FLASS+FFAIKDAI AARA G F LD+PATPE+IR AC+D+FT
Sbjct: 1260 GEPPLFLASSIFFAIKDAIRAARAQHGDNAKQLFQLDSPATPEKIRNACVDQFT 1313
>pdb|2E3T|A Chain A, Crystal Structure Of Rat Xanthine Oxidoreductase Mutant
(W335a And F336l)
pdb|2E3T|B Chain B, Crystal Structure Of Rat Xanthine Oxidoreductase Mutant
(W335a And F336l)
Length = 1331
Score = 1039 bits (2686), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 558/1254 (44%), Positives = 763/1254 (60%), Gaps = 52/1254 (4%)
Query: 21 LQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLAGNLCRCTGYRPIVDA 80
+QE + RSHGSQCGFCTPG +MSMY+LLR+ Q PT E+IE + GNLCRCTGYRPI+
Sbjct: 100 VQERIARSHGSQCGFCTPGIVMSMYTLLRN-QPEPTVEEIENAFQGNLCRCTGYRPILQG 158
Query: 81 FRVFAKTNDALYTNMSSMSLKEGEFVCPSTGKPCSCGMKNVSNADTCEKSVACGKTYEPV 140
FR FAK + ++ P C + + S+ + P
Sbjct: 159 FRTFAKDGGCCGGSGNN---------------PNCCMNQTKDQTVSLSPSL-----FNPE 198
Query: 141 SYSEIDGSTYTEKELIFPPELLLRKSNPLNLSGFGG--LKWYRPLKLQHLLELKSKYPDS 198
+ +D + +E IFPPELL K P F G + W + ++ LL+LK+++PD+
Sbjct: 199 DFKPLDPT----QEPIFPPELLRLKDTPQKKLRFEGERVTWIQASTMEELLDLKAQHPDA 254
Query: 199 KLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELLKMFRKV 258
KL+VGNTE+GIEM+ K M + +++ +PELN + +G+ GA+ L+ + + +
Sbjct: 255 KLVVGNTEIGIEMKFKNMLFPLIVCPAWIPELNSVVHGPEGISFGASCPLSLVESVLAEE 314
Query: 259 VTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPLWMASGAKFHIV 318
+ + P +T + +EQ++ AG Q+K+VAS+GGNI TASPISDLNP++MASGAK +V
Sbjct: 315 IAKLPEQKTEVFRGVMEQLRALAGKQVKSVASIGGNIITASPISDLNPVFMASGAKLTLV 374
Query: 319 DCKGNIRTT-MAEEFFLGYRKVDLTSGEILLSIFLPWTRPFEFVKEFKQAHRRDDDIALV 377
+G RT M FF GYRK L EILLSI +P+++ EF FKQA RR+DDIA V
Sbjct: 375 S-RGTRRTVRMDHTFFPGYRKTLLRPEEILLSIEIPYSKEGEFFSAFKQASRREDDIAKV 433
Query: 378 NAGMRVYLEEKDEEWVVSDALLVYGGVAPLSLSAKKTKTFIVGKSWSQELLQNALKILQT 437
+GMRV + E V + L +GG+A ++SA KT + KSW++ELLQ+ L
Sbjct: 434 TSGMRVLFKPGTIE--VQELSLCFGGMADRTISALKTTPKQLSKSWNEELLQSVCAGLAE 491
Query: 438 DIILKEDAPGGMVDXXXXXXXXXXXXXXXWVSHQMEGKNSIKE---SVPSTHLSAMQSFH 494
++ L DAPGGMV+ V ++ G+ +++ + T SA F
Sbjct: 492 ELQLAPDAPGGMVEFRRTLTLSFFFKFYLTVLQKL-GRADLEDMCGKLDPTFASATLLFQ 550
Query: 495 RPSIIGNQDYEITKHGTS----VGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLS 550
+ Q ++ S VG P HL++ +Q +GEA Y DD P N L LV S
Sbjct: 551 KDPPANVQLFQEVPKDQSEEDMVGRPLPHLAANMQASGEAVYCDDIPRYENELSLRLVTS 610
Query: 551 RRPHARILSIDDSGARSSPGFVGIFFAEDVQGDNRIGPVVADEELFASEXXXXXXXXXXX 610
R HA+I SID S A+ PGFV AEDV N G + DE +FA +
Sbjct: 611 TRAHAKITSIDTSEAKKVPGFVCFLTAEDVPNSNATG-LFNDETVFAKDEVTCVGHIIGA 669
Query: 611 XXAETHEEAKLASRKVQVEYEELPAILSIQEAIDAKSFHPNTERCFRKGDVDICFQSGQC 670
A+T E A+ A+R V++ YE+LPAI++IQ+AI+ SF+ +E KGD+ F +
Sbjct: 670 VVADTPEHAQRAARGVKITYEDLPAIITIQDAINNNSFY-GSEIKIEKGDLKKGFS--EA 726
Query: 671 DKIIEGEVRVGGQEHFYLEPHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSK 730
D ++ GE+ +GGQEHFYLE + ++ E+ + STQ K Q +V+ +LG+P ++
Sbjct: 727 DNVVSGELYIGGQEHFYLETNCTIAVPKGEAGEMELFVSTQNTMKTQSFVAKMLGVPDNR 786
Query: 731 VVCKTKRIGGGFGGKETRSAFIXXXXXVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKY 790
+V + KR+GGGFGGKETRS + + + RPV LDRD DM+I+G RH FL KY
Sbjct: 787 IVVRVKRMGGGFGGKETRSTVVSTALALAAHKTGRPVRCMLDRDEDMLITGGRHPFLAKY 846
Query: 791 KVGFTNEGKVLALDLEIYNNAGNSLDLSLAVLERAMFHSDNVYEIPNVRIMGNVCFTNFP 850
KVGF G V+AL++ ++N GN+ DLS +++ERA+FH DN Y+IPN+R G +C TN P
Sbjct: 847 KVGFMKTGTVVALEVAHFSNGGNTEDLSRSIMERALFHMDNAYKIPNIRGTGRICKTNLP 906
Query: 851 SNTAFRGFGGPQGMLITENWIQRVAVEVRKSPEEIREINFQGEGSILHYGQQLQHCTLFP 910
SNTAFRGFGGPQGMLI E W+ VA+ EE+R N EG + H+ Q+L+ TL
Sbjct: 907 SNTAFRGFGGPQGMLIAEYWMSEVAITCGLPAEEVRRKNMYKEGDLTHFNQKLEGFTLPR 966
Query: 911 LWNELKLSCDFLNARKEVDNFNLNNRWKKRGIAMVPTKFGISFTLKLMNQAGALVHVYTD 970
W+E S +L ++EV+ FN N WKKRG+ ++PTKFGISFTL +NQ GALVHVYTD
Sbjct: 967 CWDECIASSQYLARKREVEKFNRENCWKKRGLCIIPTKFGISFTLPFLNQGGALVHVYTD 1026
Query: 971 GTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETSTDKVPNXXXXXXXXXXDIY 1030
G+VL+THGG EMGQGLHTK+ QVA+ A IP S + +SETST+ VPN D+
Sbjct: 1027 GSVLLTHGGTEMGQGLHTKMVQVASRALKIPTSKIHISETSTNTVPNTSPTAASASADLN 1086
Query: 1031 GAAVLDACEQIKARMEPIASKHNFNSFAELASACYVQRIDLSAHGFYITPEIDFDWITGK 1090
G V +AC+ I R+EP K + Y + LSA GFY TP + + + T
Sbjct: 1087 GQGVYEACQTILKRLEPFKKKKPTGPWEAWVMDAYTSAVSLSATGFYKTPNLGYSFETNS 1146
Query: 1091 GNPFRYFTYGAAFAEVEIDTLTGDFHTRMANVILDLGYSLNPAIDVGQIEGAFIQGLGWL 1150
GNPF YF+YG A +EVEID LTGD ++++D+G SLNPAID+GQ+EGAF+QGLG
Sbjct: 1147 GNPFHYFSYGVACSEVEIDCLTGDHKNLRTDIVMDVGSSLNPAIDIGQVEGAFVQGLGLF 1206
Query: 1151 ALEELKWGDAAHKWIPPGCLYTCGPGSYKIPSLNDVPLKFNVSLLKGHPNVKAIHSSKAV 1210
+EEL + P G L+T GP +YKIP+ +P++F VSLL+ PN +AI++SKAV
Sbjct: 1207 TMEELHYS-------PEGSLHTRGPSTYKIPAFGSIPIEFRVSLLRDCPNKRAIYASKAV 1259
Query: 1211 GEPPFFLASSVFFAIKDAISAARADAGHTG--WFPLDNPATPERIRMACLDEFT 1262
GEPP FLASS+FFAIKDAI AARA G F LD+PATPE+IR AC+D+FT
Sbjct: 1260 GEPPLFLASSIFFAIKDAIRAARAQHGDNAKQLFQLDSPATPEKIRNACVDQFT 1313
>pdb|1N5X|A Chain A, Xanthine Dehydrogenase From Bovine Milk With Inhibitor Tei-
6720 Bound
pdb|1N5X|B Chain B, Xanthine Dehydrogenase From Bovine Milk With Inhibitor Tei-
6720 Bound
Length = 1331
Score = 1037 bits (2682), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 562/1260 (44%), Positives = 769/1260 (61%), Gaps = 64/1260 (5%)
Query: 21 LQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLAGNLCRCTGYRPIVDA 80
+QE + +SHGSQCGFCTPG +MSMY+LLR+ Q PT E+IE++ GNLCRCTGYRPI+
Sbjct: 100 VQERIAKSHGSQCGFCTPGIVMSMYTLLRN-QPEPTVEEIEDAFQGNLCRCTGYRPILQG 158
Query: 81 FRVFAKTNDALYTNMSS----MSLKEGEFVCPSTGKPCSCGMKNVSNADTCEKSVACGKT 136
FR FAK N ++ M+ K+ V S
Sbjct: 159 FRTFAKNGGCCGGNGNNPNCCMNQKKDHTVTLSPS------------------------L 194
Query: 137 YEPVSYSEIDGSTYTEKELIFPPELLLRKSNPLNLSGFGG--LKWYRPLKLQHLLELKSK 194
+ P + +D + +E IFPPELL K P F G + W + L+ LL+LK++
Sbjct: 195 FNPEEFMPLDPT----QEPIFPPELLRLKDVPPKQLRFEGERVTWIQASTLKELLDLKAQ 250
Query: 195 YPDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELLKM 254
+P++KL+VGNTE+GIEM+ K + ++I +PELN + +G+ GAA L+ + K
Sbjct: 251 HPEAKLVVGNTEIGIEMKFKNQLFPMIICPAWIPELNAVEHGPEGISFGAACALSSVEKT 310
Query: 255 FRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPLWMASGAK 314
+ V + P +T + +EQ++WFAG Q+K+VAS+GGNI TASPISDLNP++MASG K
Sbjct: 311 LLEAVAKLPTQKTEVFRGVLEQLRWFAGKQVKSVASLGGNIITASPISDLNPVFMASGTK 370
Query: 315 FHIVDCKGNIRTT-MAEEFFLGYRKVDLTSGEILLSIFLPWTRPFEFVKEFKQAHRRDDD 373
IV +G RT M FF YRK L EILLSI +P++R EF FKQA RR+DD
Sbjct: 371 LTIVS-RGTRRTVPMDHTFFPSYRKTLLGPEEILLSIEIPYSREDEFFSAFKQASRREDD 429
Query: 374 IALVNAGMRVYLEEKDEEWVVSDALLVYGGVAPLSLSAKKTKTFIVGKSWSQELLQNALK 433
IA V GMRV + + V + L YGG+A ++SA KT + K W+++LLQ+
Sbjct: 430 IAKVTCGMRVLFQPGSMQ--VKELALCYGGMADRTISALKTTQKQLSKFWNEKLLQDVCA 487
Query: 434 ILQTDIILKEDAPGGMVDXXXXXXXXXXXXXXXWVSHQMEGKNSIKE--SVPSTHLSAMQ 491
L ++ L DAPGGM++ V ++ GK+S + + T+ SA
Sbjct: 488 GLAEELSLSPDAPGGMIEFRRTLTLSFFFKFYLTVLKKL-GKDSKDKCGKLDPTYTSATL 546
Query: 492 SFHRPSIIGNQDYEITKHGTS----VGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAAL 547
F + Q ++ +G S VG P HL++ +Q +GEA Y DD P N L L
Sbjct: 547 LFQKHPPANIQLFQEVPNGQSKEDTVGRPLPHLAAAMQASGEAVYCDDIPRYENELFLRL 606
Query: 548 VLSRRPHARILSIDDSGARSSPGFVGIFFAEDVQGDNRIGPVVADEELFASEXXXXXXXX 607
V S R HA+I SID S A+ PGFV A+D+ G N G + DE +FA +
Sbjct: 607 VTSTRAHAKIKSIDVSEAQKVPGFVCFLSADDIPGSNETG-LFNDETVFAKDTVTCVGHI 665
Query: 608 XXXXXAETHEEAKLASRKVQVEYEELPAILSIQEAIDAKSFHPNTERCFRKGDVDICFQS 667
A+T E A+ A+ V+V YE+LPAI++I++AI SF+ +E KGD+ F
Sbjct: 666 IGAVVADTPEHAERAAHVVKVTYEDLPAIITIEDAIKNNSFY-GSELKIEKGDLKKGFS- 723
Query: 668 GQCDKIIEGEVRVGGQEHFYLEPHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLP 727
+ D ++ GE+ +GGQ+HFYLE H ++ E+ + STQ K Q +V+ +LG+P
Sbjct: 724 -EADNVVSGELYIGGQDHFYLETHCTIAIPKGEEGEMELFVSTQNAMKTQSFVAKMLGVP 782
Query: 728 MSKVVCKTKRIGGGFGGKETRSAFIXXXXXVPSFLLNRPVNLTLDRDIDMMISGQRHSFL 787
+++++ + KR+GGGFGGKETRS + + ++ PV LDR+ DM+I+G RH FL
Sbjct: 783 VNRILVRVKRMGGGFGGKETRSTLVSVAVALAAYKTGHPVRCMLDRNEDMLITGGRHPFL 842
Query: 788 GKYKVGFTNEGKVLALDLEIYNNAGNSLDLSLAVLERAMFHSDNVYEIPNVRIMGNVCFT 847
+YKVGF G ++AL+++ Y+NAGNS DLS +++ERA+FH DN Y+IPN+R G +C T
Sbjct: 843 ARYKVGFMKTGTIVALEVDHYSNAGNSRDLSHSIMERALFHMDNCYKIPNIRGTGRLCKT 902
Query: 848 NFPSNTAFRGFGGPQGMLITENWIQRVAVEVRKSPEEIREINFQGEGSILHYGQQLQHCT 907
N SNTAFRGFGGPQ + I ENW+ VAV EE+R N EG + H+ Q+L+ +
Sbjct: 903 NLSSNTAFRGFGGPQALFIAENWMSEVAVTCGLPAEEVRWKNMYKEGDLTHFNQRLEGFS 962
Query: 908 LFPLWNELKLSCDFLNARKEVDNFNLNNRWKKRGIAMVPTKFGISFTLKLMNQAGALVHV 967
+ W+E S + + EVD FN N WKKRG+ ++PTKFGISFT+ +NQAGAL+HV
Sbjct: 963 VPRCWDECLKSSQYYARKSEVDKFNKENCWKKRGLCIIPTKFGISFTVPFLNQAGALIHV 1022
Query: 968 YTDGTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETSTDKVPNXXXXXXXXXX 1027
YTDG+VLV+HGG EMGQGLHTK+ QVA+ A IP+S +++SETST+ VPN
Sbjct: 1023 YTDGSVLVSHGGTEMGQGLHTKMVQVASKALKIPISKIYISETSTNTVPNSSPTAASVST 1082
Query: 1028 DIYGAAVLDACEQIKARMEPIASKHNFNSFAELASACYVQRIDLSAHGFYITPEIDFDWI 1087
DIYG AV +AC+ I R+EP K+ S+ + A Y R+ LS GFY TP + + +
Sbjct: 1083 DIYGQAVYEACQTILKRLEPFKKKNPDGSWEDWVMAAYQDRVSLSTTGFYRTPNLGYSFE 1142
Query: 1088 TGKGNPFRYFTYGAAFAEVEIDTLTGDFHTRMANVILDLGYSLNPAIDVGQIEGAFIQGL 1147
T GN F YFTYG A +EVEID LTGD ++++D+G SLNPAID+GQ+EGAF+QGL
Sbjct: 1143 TNSGNAFHYFTYGVACSEVEIDCLTGDHKNLRTDIVMDVGSSLNPAIDIGQVEGAFVQGL 1202
Query: 1148 GWLALEELKWGDAAHKWIPPGCLYTCGPGSYKIPSLNDVPLKFNVSLLKGHPNVKAIHSS 1207
G LEEL + P G L+T GP +YKIP+ +P +F VSLL+ PN KAI++S
Sbjct: 1203 GLFTLEELHYS-------PEGSLHTRGPSTYKIPAFGSIPTEFRVSLLRDCPNKKAIYAS 1255
Query: 1208 KAVGEPPFFLASSVFFAIKDAISAARADAGHTG-----WFPLDNPATPERIRMACLDEFT 1262
KAVGEPP FL +SVFFAIKDAI AARA HT F LD+PATPE+IR AC+D+FT
Sbjct: 1256 KAVGEPPLFLGASVFFAIKDAIRAARAQ--HTNNNTKELFRLDSPATPEKIRNACVDKFT 1313
>pdb|3UNA|A Chain A, Crystal Structure Of Bovine Milk Xanthine Dehydrogenase With
Nad Bound
pdb|3UNA|B Chain B, Crystal Structure Of Bovine Milk Xanthine Dehydrogenase With
Nad Bound
pdb|3UNC|A Chain A, Crystal Structure Of Bovine Milk Xanthine Dehydrogenase To
1.65a Resolution
pdb|3UNC|B Chain B, Crystal Structure Of Bovine Milk Xanthine Dehydrogenase To
1.65a Resolution
pdb|3UNI|A Chain A, Crystal Structure Of Bovine Milk Xanthine Dehydrogenase With
Nadh Bound
pdb|3UNI|B Chain B, Crystal Structure Of Bovine Milk Xanthine Dehydrogenase With
Nadh Bound
Length = 1332
Score = 1037 bits (2682), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 562/1260 (44%), Positives = 769/1260 (61%), Gaps = 64/1260 (5%)
Query: 21 LQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLAGNLCRCTGYRPIVDA 80
+QE + +SHGSQCGFCTPG +MSMY+LLR+ Q PT E+IE++ GNLCRCTGYRPI+
Sbjct: 101 VQERIAKSHGSQCGFCTPGIVMSMYTLLRN-QPEPTVEEIEDAFQGNLCRCTGYRPILQG 159
Query: 81 FRVFAKTNDALYTNMSS----MSLKEGEFVCPSTGKPCSCGMKNVSNADTCEKSVACGKT 136
FR FAK N ++ M+ K+ V S
Sbjct: 160 FRTFAKNGGCCGGNGNNPNCCMNQKKDHTVTLSPS------------------------L 195
Query: 137 YEPVSYSEIDGSTYTEKELIFPPELLLRKSNPLNLSGFGG--LKWYRPLKLQHLLELKSK 194
+ P + +D + +E IFPPELL K P F G + W + L+ LL+LK++
Sbjct: 196 FNPEEFMPLDPT----QEPIFPPELLRLKDVPPKQLRFEGERVTWIQASTLKELLDLKAQ 251
Query: 195 YPDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELLKM 254
+P++KL+VGNTE+GIEM+ K + ++I +PELN + +G+ GAA L+ + K
Sbjct: 252 HPEAKLVVGNTEIGIEMKFKNQLFPMIICPAWIPELNAVEHGPEGISFGAACALSSVEKT 311
Query: 255 FRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPLWMASGAK 314
+ V + P +T + +EQ++WFAG Q+K+VAS+GGNI TASPISDLNP++MASG K
Sbjct: 312 LLEAVAKLPTQKTEVFRGVLEQLRWFAGKQVKSVASLGGNIITASPISDLNPVFMASGTK 371
Query: 315 FHIVDCKGNIRTT-MAEEFFLGYRKVDLTSGEILLSIFLPWTRPFEFVKEFKQAHRRDDD 373
IV +G RT M FF YRK L EILLSI +P++R EF FKQA RR+DD
Sbjct: 372 LTIVS-RGTRRTVPMDHTFFPSYRKTLLGPEEILLSIEIPYSREDEFFSAFKQASRREDD 430
Query: 374 IALVNAGMRVYLEEKDEEWVVSDALLVYGGVAPLSLSAKKTKTFIVGKSWSQELLQNALK 433
IA V GMRV + + V + L YGG+A ++SA KT + K W+++LLQ+
Sbjct: 431 IAKVTCGMRVLFQPGSMQ--VKELALCYGGMADRTISALKTTQKQLSKFWNEKLLQDVCA 488
Query: 434 ILQTDIILKEDAPGGMVDXXXXXXXXXXXXXXXWVSHQMEGKNSIKE--SVPSTHLSAMQ 491
L ++ L DAPGGM++ V ++ GK+S + + T+ SA
Sbjct: 489 GLAEELSLSPDAPGGMIEFRRTLTLSFFFKFYLTVLKKL-GKDSKDKCGKLDPTYTSATL 547
Query: 492 SFHRPSIIGNQDYEITKHGTS----VGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAAL 547
F + Q ++ +G S VG P HL++ +Q +GEA Y DD P N L L
Sbjct: 548 LFQKDPPANIQLFQEVPNGQSKEDTVGRPLPHLAAAMQASGEAVYCDDIPRYENELFLRL 607
Query: 548 VLSRRPHARILSIDDSGARSSPGFVGIFFAEDVQGDNRIGPVVADEELFASEXXXXXXXX 607
V S R HA+I SID S A+ PGFV A+D+ G N G + DE +FA +
Sbjct: 608 VTSTRAHAKIKSIDVSEAQKVPGFVCFLSADDIPGSNETG-LFNDETVFAKDTVTCVGHI 666
Query: 608 XXXXXAETHEEAKLASRKVQVEYEELPAILSIQEAIDAKSFHPNTERCFRKGDVDICFQS 667
A+T E A+ A+ V+V YE+LPAI++I++AI SF+ +E KGD+ F
Sbjct: 667 IGAVVADTPEHAERAAHVVKVTYEDLPAIITIEDAIKNNSFY-GSELKIEKGDLKKGFS- 724
Query: 668 GQCDKIIEGEVRVGGQEHFYLEPHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLP 727
+ D ++ GE+ +GGQ+HFYLE H ++ E+ + STQ K Q +V+ +LG+P
Sbjct: 725 -EADNVVSGELYIGGQDHFYLETHCTIAIPKGEEGEMELFVSTQNAMKTQSFVAKMLGVP 783
Query: 728 MSKVVCKTKRIGGGFGGKETRSAFIXXXXXVPSFLLNRPVNLTLDRDIDMMISGQRHSFL 787
+++++ + KR+GGGFGGKETRS + + ++ PV LDR+ DM+I+G RH FL
Sbjct: 784 VNRILVRVKRMGGGFGGKETRSTLVSVAVALAAYKTGHPVRCMLDRNEDMLITGGRHPFL 843
Query: 788 GKYKVGFTNEGKVLALDLEIYNNAGNSLDLSLAVLERAMFHSDNVYEIPNVRIMGNVCFT 847
+YKVGF G ++AL+++ Y+NAGNS DLS +++ERA+FH DN Y+IPN+R G +C T
Sbjct: 844 ARYKVGFMKTGTIVALEVDHYSNAGNSRDLSHSIMERALFHMDNCYKIPNIRGTGRLCKT 903
Query: 848 NFPSNTAFRGFGGPQGMLITENWIQRVAVEVRKSPEEIREINFQGEGSILHYGQQLQHCT 907
N SNTAFRGFGGPQ + I ENW+ VAV EE+R N EG + H+ Q+L+ +
Sbjct: 904 NLSSNTAFRGFGGPQALFIAENWMSEVAVTCGLPAEEVRWKNMYKEGDLTHFNQRLEGFS 963
Query: 908 LFPLWNELKLSCDFLNARKEVDNFNLNNRWKKRGIAMVPTKFGISFTLKLMNQAGALVHV 967
+ W+E S + + EVD FN N WKKRG+ ++PTKFGISFT+ +NQAGAL+HV
Sbjct: 964 VPRCWDECLKSSQYYARKSEVDKFNKENCWKKRGLCIIPTKFGISFTVPFLNQAGALIHV 1023
Query: 968 YTDGTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETSTDKVPNXXXXXXXXXX 1027
YTDG+VLV+HGG EMGQGLHTK+ QVA+ A IP+S +++SETST+ VPN
Sbjct: 1024 YTDGSVLVSHGGTEMGQGLHTKMVQVASKALKIPISKIYISETSTNTVPNSSPTAASVST 1083
Query: 1028 DIYGAAVLDACEQIKARMEPIASKHNFNSFAELASACYVQRIDLSAHGFYITPEIDFDWI 1087
DIYG AV +AC+ I R+EP K+ S+ + A Y R+ LS GFY TP + + +
Sbjct: 1084 DIYGQAVYEACQTILKRLEPFKKKNPDGSWEDWVMAAYQDRVSLSTTGFYRTPNLGYSFE 1143
Query: 1088 TGKGNPFRYFTYGAAFAEVEIDTLTGDFHTRMANVILDLGYSLNPAIDVGQIEGAFIQGL 1147
T GN F YFTYG A +EVEID LTGD ++++D+G SLNPAID+GQ+EGAF+QGL
Sbjct: 1144 TNSGNAFHYFTYGVACSEVEIDCLTGDHKNLRTDIVMDVGSSLNPAIDIGQVEGAFVQGL 1203
Query: 1148 GWLALEELKWGDAAHKWIPPGCLYTCGPGSYKIPSLNDVPLKFNVSLLKGHPNVKAIHSS 1207
G LEEL + P G L+T GP +YKIP+ +P +F VSLL+ PN KAI++S
Sbjct: 1204 GLFTLEELHYS-------PEGSLHTRGPSTYKIPAFGSIPTEFRVSLLRDCPNKKAIYAS 1256
Query: 1208 KAVGEPPFFLASSVFFAIKDAISAARADAGHTG-----WFPLDNPATPERIRMACLDEFT 1262
KAVGEPP FL +SVFFAIKDAI AARA HT F LD+PATPE+IR AC+D+FT
Sbjct: 1257 KAVGEPPLFLGASVFFAIKDAIRAARAQ--HTNNNTKELFRLDSPATPEKIRNACVDKFT 1314
>pdb|1FO4|A Chain A, Crystal Structure Of Xanthine Dehydrogenase Isolated From
Bovine Milk
pdb|1FO4|B Chain B, Crystal Structure Of Xanthine Dehydrogenase Isolated From
Bovine Milk
pdb|1V97|A Chain A, Crystal Structure Of Bovine Milk Xanthine Dehydrogenase
Fyx-051 Bound Form
pdb|1V97|B Chain B, Crystal Structure Of Bovine Milk Xanthine Dehydrogenase
Fyx-051 Bound Form
pdb|1VDV|A Chain A, Bovine Milk Xanthine Dehydrogenase Y-700 Bound Form
pdb|1VDV|B Chain B, Bovine Milk Xanthine Dehydrogenase Y-700 Bound Form
pdb|3BDJ|A Chain A, Crystal Structure Of Bovine Milk Xanthine Dehydrogenase With
A Covalently Bound Oxipurinol Inhibitor
pdb|3BDJ|B Chain B, Crystal Structure Of Bovine Milk Xanthine Dehydrogenase With
A Covalently Bound Oxipurinol Inhibitor
pdb|3AM9|A Chain A, Complex Of Bovine Xanthine Dehydrogenase And Trihydroxy
Fyx-051
pdb|3AM9|B Chain B, Complex Of Bovine Xanthine Dehydrogenase And Trihydroxy
Fyx-051
pdb|3AMZ|A Chain A, Bovine Xanthine Oxidoreductase Urate Bound Form
pdb|3AMZ|B Chain B, Bovine Xanthine Oxidoreductase Urate Bound Form
pdb|3AX7|A Chain A, Bovine Xanthine Oxidase, Protease Cleaved Form
pdb|3AX7|B Chain B, Bovine Xanthine Oxidase, Protease Cleaved Form
pdb|3AX9|A Chain A, Bovine Xanthone Oxidase, Protease Cleaved Form
pdb|3AX9|B Chain B, Bovine Xanthone Oxidase, Protease Cleaved Form
Length = 1332
Score = 1037 bits (2681), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 562/1260 (44%), Positives = 769/1260 (61%), Gaps = 64/1260 (5%)
Query: 21 LQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLAGNLCRCTGYRPIVDA 80
+QE + +SHGSQCGFCTPG +MSMY+LLR+ Q PT E+IE++ GNLCRCTGYRPI+
Sbjct: 101 VQERIAKSHGSQCGFCTPGIVMSMYTLLRN-QPEPTVEEIEDAFQGNLCRCTGYRPILQG 159
Query: 81 FRVFAKTNDALYTNMSS----MSLKEGEFVCPSTGKPCSCGMKNVSNADTCEKSVACGKT 136
FR FAK N ++ M+ K+ V S
Sbjct: 160 FRTFAKNGGCCGGNGNNPNCCMNQKKDHTVTLSPS------------------------L 195
Query: 137 YEPVSYSEIDGSTYTEKELIFPPELLLRKSNPLNLSGFGG--LKWYRPLKLQHLLELKSK 194
+ P + +D + +E IFPPELL K P F G + W + L+ LL+LK++
Sbjct: 196 FNPEEFMPLDPT----QEPIFPPELLRLKDVPPKQLRFEGERVTWIQASTLKELLDLKAQ 251
Query: 195 YPDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELLKM 254
+P++KL+VGNTE+GIEM+ K + ++I +PELN + +G+ GAA L+ + K
Sbjct: 252 HPEAKLVVGNTEIGIEMKFKNQLFPMIICPAWIPELNAVEHGPEGISFGAACALSSVEKT 311
Query: 255 FRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPLWMASGAK 314
+ V + P +T + +EQ++WFAG Q+K+VAS+GGNI TASPISDLNP++MASG K
Sbjct: 312 LLEAVAKLPTQKTEVFRGVLEQLRWFAGKQVKSVASLGGNIITASPISDLNPVFMASGTK 371
Query: 315 FHIVDCKGNIRTT-MAEEFFLGYRKVDLTSGEILLSIFLPWTRPFEFVKEFKQAHRRDDD 373
IV +G RT M FF YRK L EILLSI +P++R EF FKQA RR+DD
Sbjct: 372 LTIVS-RGTRRTVPMDHTFFPSYRKTLLGPEEILLSIEIPYSREDEFFSAFKQASRREDD 430
Query: 374 IALVNAGMRVYLEEKDEEWVVSDALLVYGGVAPLSLSAKKTKTFIVGKSWSQELLQNALK 433
IA V GMRV + + V + L YGG+A ++SA KT + K W+++LLQ+
Sbjct: 431 IAKVTCGMRVLFQPGSMQ--VKELALCYGGMADRTISALKTTQKQLSKFWNEKLLQDVCA 488
Query: 434 ILQTDIILKEDAPGGMVDXXXXXXXXXXXXXXXWVSHQMEGKNSIKE--SVPSTHLSAMQ 491
L ++ L DAPGGM++ V ++ GK+S + + T+ SA
Sbjct: 489 GLAEELSLSPDAPGGMIEFRRTLTLSFFFKFYLTVLKKL-GKDSKDKCGKLDPTYTSATL 547
Query: 492 SFHRPSIIGNQDYEITKHGTS----VGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAAL 547
F + Q ++ +G S VG P HL++ +Q +GEA Y DD P N L L
Sbjct: 548 LFQKHPPANIQLFQEVPNGQSKEDTVGRPLPHLAAAMQASGEAVYCDDIPRYENELFLRL 607
Query: 548 VLSRRPHARILSIDDSGARSSPGFVGIFFAEDVQGDNRIGPVVADEELFASEXXXXXXXX 607
V S R HA+I SID S A+ PGFV A+D+ G N G + DE +FA +
Sbjct: 608 VTSTRAHAKIKSIDVSEAQKVPGFVCFLSADDIPGSNETG-LFNDETVFAKDTVTCVGHI 666
Query: 608 XXXXXAETHEEAKLASRKVQVEYEELPAILSIQEAIDAKSFHPNTERCFRKGDVDICFQS 667
A+T E A+ A+ V+V YE+LPAI++I++AI SF+ +E KGD+ F
Sbjct: 667 IGAVVADTPEHAERAAHVVKVTYEDLPAIITIEDAIKNNSFY-GSELKIEKGDLKKGFS- 724
Query: 668 GQCDKIIEGEVRVGGQEHFYLEPHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLP 727
+ D ++ GE+ +GGQ+HFYLE H ++ E+ + STQ K Q +V+ +LG+P
Sbjct: 725 -EADNVVSGELYIGGQDHFYLETHCTIAIPKGEEGEMELFVSTQNAMKTQSFVAKMLGVP 783
Query: 728 MSKVVCKTKRIGGGFGGKETRSAFIXXXXXVPSFLLNRPVNLTLDRDIDMMISGQRHSFL 787
+++++ + KR+GGGFGGKETRS + + ++ PV LDR+ DM+I+G RH FL
Sbjct: 784 VNRILVRVKRMGGGFGGKETRSTLVSVAVALAAYKTGHPVRCMLDRNEDMLITGGRHPFL 843
Query: 788 GKYKVGFTNEGKVLALDLEIYNNAGNSLDLSLAVLERAMFHSDNVYEIPNVRIMGNVCFT 847
+YKVGF G ++AL+++ Y+NAGNS DLS +++ERA+FH DN Y+IPN+R G +C T
Sbjct: 844 ARYKVGFMKTGTIVALEVDHYSNAGNSRDLSHSIMERALFHMDNCYKIPNIRGTGRLCKT 903
Query: 848 NFPSNTAFRGFGGPQGMLITENWIQRVAVEVRKSPEEIREINFQGEGSILHYGQQLQHCT 907
N SNTAFRGFGGPQ + I ENW+ VAV EE+R N EG + H+ Q+L+ +
Sbjct: 904 NLSSNTAFRGFGGPQALFIAENWMSEVAVTCGLPAEEVRWKNMYKEGDLTHFNQRLEGFS 963
Query: 908 LFPLWNELKLSCDFLNARKEVDNFNLNNRWKKRGIAMVPTKFGISFTLKLMNQAGALVHV 967
+ W+E S + + EVD FN N WKKRG+ ++PTKFGISFT+ +NQAGAL+HV
Sbjct: 964 VPRCWDECLKSSQYYARKSEVDKFNKENCWKKRGLCIIPTKFGISFTVPFLNQAGALIHV 1023
Query: 968 YTDGTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETSTDKVPNXXXXXXXXXX 1027
YTDG+VLV+HGG EMGQGLHTK+ QVA+ A IP+S +++SETST+ VPN
Sbjct: 1024 YTDGSVLVSHGGTEMGQGLHTKMVQVASKALKIPISKIYISETSTNTVPNSSPTAASVST 1083
Query: 1028 DIYGAAVLDACEQIKARMEPIASKHNFNSFAELASACYVQRIDLSAHGFYITPEIDFDWI 1087
DIYG AV +AC+ I R+EP K+ S+ + A Y R+ LS GFY TP + + +
Sbjct: 1084 DIYGQAVYEACQTILKRLEPFKKKNPDGSWEDWVMAAYQDRVSLSTTGFYRTPNLGYSFE 1143
Query: 1088 TGKGNPFRYFTYGAAFAEVEIDTLTGDFHTRMANVILDLGYSLNPAIDVGQIEGAFIQGL 1147
T GN F YFTYG A +EVEID LTGD ++++D+G SLNPAID+GQ+EGAF+QGL
Sbjct: 1144 TNSGNAFHYFTYGVACSEVEIDCLTGDHKNLRTDIVMDVGSSLNPAIDIGQVEGAFVQGL 1203
Query: 1148 GWLALEELKWGDAAHKWIPPGCLYTCGPGSYKIPSLNDVPLKFNVSLLKGHPNVKAIHSS 1207
G LEEL + P G L+T GP +YKIP+ +P +F VSLL+ PN KAI++S
Sbjct: 1204 GLFTLEELHYS-------PEGSLHTRGPSTYKIPAFGSIPTEFRVSLLRDCPNKKAIYAS 1256
Query: 1208 KAVGEPPFFLASSVFFAIKDAISAARADAGHTG-----WFPLDNPATPERIRMACLDEFT 1262
KAVGEPP FL +SVFFAIKDAI AARA HT F LD+PATPE+IR AC+D+FT
Sbjct: 1257 KAVGEPPLFLGASVFFAIKDAIRAARAQ--HTNNNTKELFRLDSPATPEKIRNACVDKFT 1314
>pdb|3ZYV|A Chain A, Crystal Structure Of The Mouse Liver Aldehyde Oxydase 3
(Maox3)
pdb|3ZYV|B Chain B, Crystal Structure Of The Mouse Liver Aldehyde Oxydase 3
(Maox3)
pdb|3ZYV|C Chain C, Crystal Structure Of The Mouse Liver Aldehyde Oxydase 3
(Maox3)
pdb|3ZYV|D Chain D, Crystal Structure Of The Mouse Liver Aldehyde Oxydase 3
(Maox3)
Length = 1335
Score = 826 bits (2134), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 485/1259 (38%), Positives = 712/1259 (56%), Gaps = 64/1259 (5%)
Query: 21 LQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLAGNLCRCTGYRPIVDA 80
+QE + + HG+QCGFCTPG +MS+Y+LLR+ P TE QI E+L GNLCRCTGYRPIV++
Sbjct: 105 VQERIAKGHGTQCGFCTPGMVMSIYTLLRNHPEPSTE-QIMETLGGNLCRCTGYRPIVES 163
Query: 81 FRVFAKTNDALYTNMSSMSLKEGEFVCPSTGKPCSCGMKNVSNADTCEKSVACGKTYEPV 140
+ F ++ N GE GK C KN + K+ C K YE
Sbjct: 164 AKSFCPSSTCCQMN--------GE------GKCCLDEEKN----EPERKNSVCTKLYEKK 205
Query: 141 SYSEIDGSTYTEKELIFPPELLLRKSNPLN-LSGFGGLK--WYRPLKLQHLLELKSKYPD 197
+ +D + +ELIFPPEL+ N + F G + W P L LLELK K+P
Sbjct: 206 EFQPLDPT----QELIFPPELMRMAEESQNTVLTFRGERTTWIAPGTLNDLLELKMKHPS 261
Query: 198 SKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELLKMFRK 257
+ L++GNT +G+ M+ + Y ++IS + EL V+ GL +G + LT++ +
Sbjct: 262 APLVIGNTYLGLHMKFTDVSYPIIISPARILELFVVTNTKQGLTLGTGLSLTQVKNVLSD 321
Query: 258 VVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPLWMASGAKFHI 317
VV+ P +T A ++Q+K AG QI+NVAS+GG+I + P SDLNP+ ++
Sbjct: 322 VVSRLPKEKTQIYCALLKQLKTLAGQQIRNVASLGGHIISRLPTSDLNPILGIGNCILNV 381
Query: 318 VDCKGNIRTTMAEEFFLGYRKVDLTSGEILLSIFLPWTRPFEFVKEFKQAHRRDDDIALV 377
+G + + + F G L ++L+S+F+P + +EFV F+QA R+ + A V
Sbjct: 382 ASTEGIQQIPLNDHFLAGVPDAILKPEQVLISVFVPRSSKWEFVSAFRQAPRQQNAFATV 441
Query: 378 NAGMRVYLEEKDEEWVVSDALLVYGGVAPLSLSAKKTKTFIVGKSWSQELLQNALKILQT 437
NAGM+V K++ ++D ++YGG+ +SA K+ ++G+ W +E+L +A K++
Sbjct: 442 NAGMKVVF--KEDTNTITDLGILYGGIGATVISADKSCRQLIGRCWDEEMLDDAGKMICE 499
Query: 438 DIILKEDAPGGMVDXXXXXXXXXXXXXXXWVSHQMEGKNS------------IKESVPST 485
++ L APGGM + V Q++ ++ I E P T
Sbjct: 500 EVSLLMAAPGGMEEYRKTLAISFLFMFYLDVLKQLKTRDPHKYPDISQKLLHILEDFPLT 559
Query: 486 HLSAMQSFHRPSIIGNQDYEITKH-GTSVGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLH 544
MQSF QD + + +G P +H S TGEA + DD + P L
Sbjct: 560 MPYGMQSF--------QDVDFQQPLQDPIGRPIMHQSGIKHATGEAVFCDDMSVLPGELF 611
Query: 545 AALVLSRRPHARILSIDDSGARSSPGFVGIFFAEDVQGDNRIGPVVADEELFASEXXXXX 604
A+V S + HA+I+S+D S A +S G V + A DV GDN +E L+A +
Sbjct: 612 LAVVTSSKSHAKIISLDASEALASLGVVDVVTARDVPGDNG----REEESLYAQDEVICV 667
Query: 605 XXXXXXXXAETHEEAKLASRKVQVEYEEL-PAILSIQEAIDAKSFHPNTERCFRKGDVDI 663
A+++ A+ A++KV++ Y+++ P I+++Q+A+ +SF ER +G+V+
Sbjct: 668 GQIVCAVAADSYAHAQQAAKKVKIVYQDIEPMIVTVQDALQYESFI-GPERKLEQGNVEE 726
Query: 664 CFQSGQCDKIIEGEVRVGGQEHFYLEPHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHV 723
FQ D+I+EGEV +GGQEHFY+E S V E+ + S+Q Q+ V+
Sbjct: 727 AFQCA--DQILEGEVHLGGQEHFYMETQSVRVVPKGEDKEMDIYVSSQDAAFTQEMVART 784
Query: 724 LGLPMSKVVCKTKRIGGGFGGKETRSAFIXXXXXVPSFLLNRPVNLTLDRDIDMMISGQR 783
LG+P +++ C KR+GG FGGK ++ + V + RP+ L+R DM+I+G R
Sbjct: 785 LGIPKNRINCHVKRVGGAFGGKASKPGLLASVAAVAAQKTGRPIRFILERRDDMLITGGR 844
Query: 784 HSFLGKYKVGFTNEGKVLALDLEIYNNAGNSLDLSLAVLERAMFHSDNVYEIPNVRIMGN 843
H LGKYK+GF N GK+ A D+++Y N G + D S V+E A+ +N Y+IPN+R+ G
Sbjct: 845 HPLLGKYKIGFMNNGKIKAADIQLYINGGCTPDDSELVIEYALLKLENAYKIPNLRVRGR 904
Query: 844 VCFTNFPSNTAFRGFGGPQGMLITENWIQRVAVEVRKSPEEIREINFQGEGSILHYGQQL 903
VC TN PSNTAFRGFG PQG +TE + VA + R PE++RE+N + Q+
Sbjct: 905 VCKTNLPSNTAFRGFGFPQGAFVTETCMSAVAAKCRLPPEKVRELNMYRTIDRTIHNQEF 964
Query: 904 QHCTLFPLWNELKLSCDFLNARKEVDNFNLNNRWKKRGIAMVPTKFGISFTLKLMNQAGA 963
L W + + N +K VD FN WKKRGIA++P KF + F QA A
Sbjct: 965 DPTNLLQCWEACVENSSYYNRKKAVDEFNQQRFWKKRGIAIIPMKFSVGFPKTFYYQAAA 1024
Query: 964 LVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETSTDKVPNXXXXXX 1023
LV +YTDG+VLV HGGVE+GQG++TK+ QVA+ IP+S + + E ST VPN
Sbjct: 1025 LVQIYTDGSVLVAHGGVELGQGINTKMIQVASRELKIPMSYIHLDEMSTVTVPNTVTTGA 1084
Query: 1024 XXXXDIYGAAVLDACEQIKARMEPIASKHNFNSFAELASACYVQRIDLSAHGFYITPEID 1083
D+ G AV +AC+ + R+EPI ++ ++ E +VQ I LSA G++ + D
Sbjct: 1085 STGADVNGRAVQNACQILMKRLEPIIKQNPSGTWEEWVKEAFVQSISLSATGYFRGYQAD 1144
Query: 1084 FDWITGKGNPFRYFTYGAAFAEVEIDTLTGDFHTRMANVILDLGYSLNPAIDVGQIEGAF 1143
DW G+G+ F YF +GAA +EVEID LTG ++++D +S+NPA+D+GQIEGAF
Sbjct: 1145 MDWEKGEGDIFPYFVFGAACSEVEIDCLTGAHKNIRTDIVMDGSFSINPAVDIGQIEGAF 1204
Query: 1144 IQGLGWLALEELKWGDAAHKWIPPGCLYTCGPGSYKIPSLNDVPLKFNVSLLKGHPNVKA 1203
+QGLG LEELK+ P G LYT GP YKI S+ D+P +F+VSLL PN KA
Sbjct: 1205 VQGLGLYTLEELKYS-------PEGVLYTRGPHQYKIASVTDIPEEFHVSLLTPTPNPKA 1257
Query: 1204 IHSSKAVGEPPFFLASSVFFAIKDAISAARADAGHTGWFPLDNPATPERIRMACLDEFT 1262
I+SSK +GE FL SVFFAI A++AAR + G + + +++PAT E IRMAC D+FT
Sbjct: 1258 IYSSKGLGEAGTFLGCSVFFAIAAAVAAAREERGLSPIWAINSPATAEVIRMACEDQFT 1316
>pdb|3SR6|C Chain C, Crystal Structure Of Reduced Bovine Xanthine Oxidase In
Complex With Arsenite
pdb|3SR6|L Chain L, Crystal Structure Of Reduced Bovine Xanthine Oxidase In
Complex With Arsenite
Length = 745
Score = 729 bits (1881), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/756 (48%), Positives = 491/756 (64%), Gaps = 18/756 (2%)
Query: 512 SVGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGF 571
+VG P HL++ +Q +GEA Y DD P N L LV S R HA+I SID S A+ PGF
Sbjct: 2 TVGRPLPHLAAAMQASGEAVYCDDIPRYENELFLRLVTSTRAHAKIKSIDVSEAQKVPGF 61
Query: 572 VGIFFAEDVQGDNRIGPVVADEELFASEXXXXXXXXXXXXXAETHEEAKLASRKVQVEYE 631
V A+D+ G N G + DE +FA + A+T E A+ A+ V+V YE
Sbjct: 62 VCFLSADDIPGSNETG-LFNDETVFAKDTVTCVGHIIGAVVADTPEHAERAAHVVKVTYE 120
Query: 632 ELPAILSIQEAIDAKSFHPNTERCFRKGDVDICFQSGQCDKIIEGEVRVGGQEHFYLEPH 691
+LPAI++I++AI SF+ +E KGD+ F + D ++ GE+ +GGQ+HFYLE H
Sbjct: 121 DLPAIITIEDAIKNNSFY-GSELKIEKGDLKKGFS--EADNVVSGELYIGGQDHFYLETH 177
Query: 692 SSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKETRSAF 751
++ E+ + STQ K Q +V+ +LG+P+++++ + KR+GGGFGGKETRS
Sbjct: 178 CTIAIPKGEEGEMELFVSTQNAMKTQSFVAKMLGVPVNRILVRVKRMGGGFGGKETRSTL 237
Query: 752 IXXXXXVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLEIYNNA 811
+ + ++ PV LDR+ DM+I+G RH FL +YKVGF G ++AL+++ Y+NA
Sbjct: 238 VSVAVALAAYKTGHPVRCMLDRNEDMLITGGRHPFLARYKVGFMKTGTIVALEVDHYSNA 297
Query: 812 GNSLDLSLAVLERAMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITENWI 871
GNS DLS +++ERA+FH DN Y+IPN+R G +C TN SNTAFRGFGGPQ + I ENW+
Sbjct: 298 GNSRDLSHSIMERALFHMDNCYKIPNIRGTGRLCKTNLSSNTAFRGFGGPQALFIAENWM 357
Query: 872 QRVAVEVRKSPEEIREINFQGEGSILHYGQQLQHCTLFPLWNELKLSCDFLNARKEVDNF 931
VAV EE+R N EG + H+ Q+L+ ++ W+E S + + EVD F
Sbjct: 358 SEVAVTCGLPAEEVRWKNMYKEGDLTHFNQRLEGFSVPRCWDECLKSSQYYARKSEVDKF 417
Query: 932 NLNNRWKKRGIAMVPTKFGISFTLKLMNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVA 991
N N WKKRG+ ++PTKFGISFT+ +NQAGAL+HVYTDG+VLV+HGG EMGQGLHTK+
Sbjct: 418 NKENCWKKRGLCIIPTKFGISFTVPFLNQAGALIHVYTDGSVLVSHGGTEMGQGLHTKMV 477
Query: 992 QVAASAFNIPLSSVFVSETSTDKVPNXXXXXXXXXXDIYGAAVLDACEQIKARMEPIASK 1051
QVA+ A IP+S +++SETST+ VPN DIYG AV +AC+ I R+EP K
Sbjct: 478 QVASKALKIPISKIYISETSTNTVPNSSPTAASVSTDIYGQAVYEACQTILKRLEPFKKK 537
Query: 1052 HNFNSFAELASACYVQRIDLSAHGFYITPEIDFDWITGKGNPFRYFTYGAAFAEVEIDTL 1111
+ S+ + A Y R+ LS GFY TP + + + T GN F YFTYG A +EVEID L
Sbjct: 538 NPDGSWEDWVMAAYQDRVSLSTTGFYRTPNLGYSFETNSGNAFHYFTYGVACSEVEIDCL 597
Query: 1112 TGDFHTRMANVILDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPGCLY 1171
TGD ++++D+G SLNPAID+GQ+EGAF+QGLG LEEL + P G L+
Sbjct: 598 TGDHKNLRTDIVMDVGSSLNPAIDIGQVEGAFVQGLGLFTLEELHYS-------PEGSLH 650
Query: 1172 TCGPGSYKIPSLNDVPLKFNVSLLKGHPNVKAIHSSKAVGEPPFFLASSVFFAIKDAISA 1231
T GP +YKIP+ +P +F VSLL+ PN KAI++SKAVGEPP FL +SVFFAIKDAI A
Sbjct: 651 TRGPSTYKIPAFGSIPTEFRVSLLRDCPNKKAIYASKAVGEPPLFLGASVFFAIKDAIRA 710
Query: 1232 ARADAGHTG-----WFPLDNPATPERIRMACLDEFT 1262
ARA HT F LD+PATPE+IR AC+D+FT
Sbjct: 711 ARAQ--HTNNNTKELFRLDSPATPEKIRNACVDKFT 744
>pdb|3NRZ|C Chain C, Crystal Structure Of Bovine Xanthine Oxidase In Complex With
Hypoxanthine
pdb|3NRZ|L Chain L, Crystal Structure Of Bovine Xanthine Oxidase In Complex With
Hypoxanthine
pdb|3NVW|C Chain C, Crystal Structure Of Bovine Xanthine Oxidase In Complex With
Guanine
pdb|3NVW|L Chain L, Crystal Structure Of Bovine Xanthine Oxidase In Complex With
Guanine
pdb|3NVY|C Chain C, Crystal Structure Of Bovine Xanthine Oxidase In Complex With
Quercetin
pdb|3NVY|L Chain L, Crystal Structure Of Bovine Xanthine Oxidase In Complex With
Quercetin
Length = 756
Score = 728 bits (1880), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/756 (48%), Positives = 491/756 (64%), Gaps = 18/756 (2%)
Query: 512 SVGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGF 571
+VG P HL++ +Q +GEA Y DD P N L LV S R HA+I SID S A+ PGF
Sbjct: 2 TVGRPLPHLAAAMQASGEAVYCDDIPRYENELFLRLVTSTRAHAKIKSIDVSEAQKVPGF 61
Query: 572 VGIFFAEDVQGDNRIGPVVADEELFASEXXXXXXXXXXXXXAETHEEAKLASRKVQVEYE 631
V A+D+ G N G + DE +FA + A+T E A+ A+ V+V YE
Sbjct: 62 VCFLSADDIPGSNETG-LFNDETVFAKDTVTCVGHIIGAVVADTPEHAERAAHVVKVTYE 120
Query: 632 ELPAILSIQEAIDAKSFHPNTERCFRKGDVDICFQSGQCDKIIEGEVRVGGQEHFYLEPH 691
+LPAI++I++AI SF+ +E KGD+ F + D ++ GE+ +GGQ+HFYLE H
Sbjct: 121 DLPAIITIEDAIKNNSFY-GSELKIEKGDLKKGFS--EADNVVSGELYIGGQDHFYLETH 177
Query: 692 SSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKETRSAF 751
++ E+ + STQ K Q +V+ +LG+P+++++ + KR+GGGFGGKETRS
Sbjct: 178 CTIAIPKGEEGEMELFVSTQNAMKTQSFVAKMLGVPVNRILVRVKRMGGGFGGKETRSTL 237
Query: 752 IXXXXXVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLEIYNNA 811
+ + ++ PV LDR+ DM+I+G RH FL +YKVGF G ++AL+++ Y+NA
Sbjct: 238 VSVAVALAAYKTGHPVRCMLDRNEDMLITGGRHPFLARYKVGFMKTGTIVALEVDHYSNA 297
Query: 812 GNSLDLSLAVLERAMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITENWI 871
GNS DLS +++ERA+FH DN Y+IPN+R G +C TN SNTAFRGFGGPQ + I ENW+
Sbjct: 298 GNSRDLSHSIMERALFHMDNCYKIPNIRGTGRLCKTNLSSNTAFRGFGGPQALFIAENWM 357
Query: 872 QRVAVEVRKSPEEIREINFQGEGSILHYGQQLQHCTLFPLWNELKLSCDFLNARKEVDNF 931
VAV EE+R N EG + H+ Q+L+ ++ W+E S + + EVD F
Sbjct: 358 SEVAVTCGLPAEEVRWKNMYKEGDLTHFNQRLEGFSVPRCWDECLKSSQYYARKSEVDKF 417
Query: 932 NLNNRWKKRGIAMVPTKFGISFTLKLMNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVA 991
N N WKKRG+ ++PTKFGISFT+ +NQAGAL+HVYTDG+VLV+HGG EMGQGLHTK+
Sbjct: 418 NKENCWKKRGLCIIPTKFGISFTVPFLNQAGALIHVYTDGSVLVSHGGTEMGQGLHTKMV 477
Query: 992 QVAASAFNIPLSSVFVSETSTDKVPNXXXXXXXXXXDIYGAAVLDACEQIKARMEPIASK 1051
QVA+ A IP+S +++SETST+ VPN DIYG AV +AC+ I R+EP K
Sbjct: 478 QVASKALKIPISKIYISETSTNTVPNSSPTAASVSTDIYGQAVYEACQTILKRLEPFKKK 537
Query: 1052 HNFNSFAELASACYVQRIDLSAHGFYITPEIDFDWITGKGNPFRYFTYGAAFAEVEIDTL 1111
+ S+ + A Y R+ LS GFY TP + + + T GN F YFTYG A +EVEID L
Sbjct: 538 NPDGSWEDWVMAAYQDRVSLSTTGFYRTPNLGYSFETNSGNAFHYFTYGVACSEVEIDCL 597
Query: 1112 TGDFHTRMANVILDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPGCLY 1171
TGD ++++D+G SLNPAID+GQ+EGAF+QGLG LEEL + P G L+
Sbjct: 598 TGDHKNLRTDIVMDVGSSLNPAIDIGQVEGAFVQGLGLFTLEELHYS-------PEGSLH 650
Query: 1172 TCGPGSYKIPSLNDVPLKFNVSLLKGHPNVKAIHSSKAVGEPPFFLASSVFFAIKDAISA 1231
T GP +YKIP+ +P +F VSLL+ PN KAI++SKAVGEPP FL +SVFFAIKDAI A
Sbjct: 651 TRGPSTYKIPAFGSIPTEFRVSLLRDCPNKKAIYASKAVGEPPLFLGASVFFAIKDAIRA 710
Query: 1232 ARADAGHTG-----WFPLDNPATPERIRMACLDEFT 1262
ARA HT F LD+PATPE+IR AC+D+FT
Sbjct: 711 ARAQ--HTNNNTKELFRLDSPATPEKIRNACVDKFT 744
>pdb|3EUB|C Chain C, Crystal Structure Of Desulfo-Xanthine Oxidase With Xanthine
pdb|3EUB|L Chain L, Crystal Structure Of Desulfo-Xanthine Oxidase With Xanthine
pdb|3EUB|U Chain U, Crystal Structure Of Desulfo-Xanthine Oxidase With Xanthine
pdb|3EUB|4 Chain 4, Crystal Structure Of Desulfo-Xanthine Oxidase With Xanthine
Length = 762
Score = 728 bits (1880), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/756 (48%), Positives = 491/756 (64%), Gaps = 18/756 (2%)
Query: 512 SVGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGF 571
+VG P HL++ +Q +GEA Y DD P N L LV S R HA+I SID S A+ PGF
Sbjct: 2 TVGRPLPHLAAAMQASGEAVYCDDIPRYENELFLRLVTSTRAHAKIKSIDVSEAQKVPGF 61
Query: 572 VGIFFAEDVQGDNRIGPVVADEELFASEXXXXXXXXXXXXXAETHEEAKLASRKVQVEYE 631
V A+D+ G N G + DE +FA + A+T E A+ A+ V+V YE
Sbjct: 62 VCFLSADDIPGSNETG-LFNDETVFAKDTVTCVGHIIGAVVADTPEHAERAAHVVKVTYE 120
Query: 632 ELPAILSIQEAIDAKSFHPNTERCFRKGDVDICFQSGQCDKIIEGEVRVGGQEHFYLEPH 691
+LPAI++I++AI SF+ +E KGD+ F + D ++ GE+ +GGQ+HFYLE H
Sbjct: 121 DLPAIITIEDAIKNNSFY-GSELKIEKGDLKKGFS--EADNVVSGELYIGGQDHFYLETH 177
Query: 692 SSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKETRSAF 751
++ E+ + STQ K Q +V+ +LG+P+++++ + KR+GGGFGGKETRS
Sbjct: 178 CTIAIPKGEEGEMELFVSTQNAMKTQSFVAKMLGVPVNRILVRVKRMGGGFGGKETRSTL 237
Query: 752 IXXXXXVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLEIYNNA 811
+ + ++ PV LDR+ DM+I+G RH FL +YKVGF G ++AL+++ Y+NA
Sbjct: 238 VSVAVALAAYKTGHPVRCMLDRNEDMLITGGRHPFLARYKVGFMKTGTIVALEVDHYSNA 297
Query: 812 GNSLDLSLAVLERAMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITENWI 871
GNS DLS +++ERA+FH DN Y+IPN+R G +C TN SNTAFRGFGGPQ + I ENW+
Sbjct: 298 GNSRDLSHSIMERALFHMDNCYKIPNIRGTGRLCKTNLSSNTAFRGFGGPQALFIAENWM 357
Query: 872 QRVAVEVRKSPEEIREINFQGEGSILHYGQQLQHCTLFPLWNELKLSCDFLNARKEVDNF 931
VAV EE+R N EG + H+ Q+L+ ++ W+E S + + EVD F
Sbjct: 358 SEVAVTCGLPAEEVRWKNMYKEGDLTHFNQRLEGFSVPRCWDECLKSSQYYARKSEVDKF 417
Query: 932 NLNNRWKKRGIAMVPTKFGISFTLKLMNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVA 991
N N WKKRG+ ++PTKFGISFT+ +NQAGAL+HVYTDG+VLV+HGG EMGQGLHTK+
Sbjct: 418 NKENCWKKRGLCIIPTKFGISFTVPFLNQAGALIHVYTDGSVLVSHGGTEMGQGLHTKMV 477
Query: 992 QVAASAFNIPLSSVFVSETSTDKVPNXXXXXXXXXXDIYGAAVLDACEQIKARMEPIASK 1051
QVA+ A IP+S +++SETST+ VPN DIYG AV +AC+ I R+EP K
Sbjct: 478 QVASKALKIPISKIYISETSTNTVPNSSPTAASVSTDIYGQAVYEACQTILKRLEPFKKK 537
Query: 1052 HNFNSFAELASACYVQRIDLSAHGFYITPEIDFDWITGKGNPFRYFTYGAAFAEVEIDTL 1111
+ S+ + A Y R+ LS GFY TP + + + T GN F YFTYG A +EVEID L
Sbjct: 538 NPDGSWEDWVMAAYQDRVSLSTTGFYRTPNLGYSFETNSGNAFHYFTYGVACSEVEIDCL 597
Query: 1112 TGDFHTRMANVILDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPGCLY 1171
TGD ++++D+G SLNPAID+GQ+EGAF+QGLG LEEL + P G L+
Sbjct: 598 TGDHKNLRTDIVMDVGSSLNPAIDIGQVEGAFVQGLGLFTLEELHYS-------PEGSLH 650
Query: 1172 TCGPGSYKIPSLNDVPLKFNVSLLKGHPNVKAIHSSKAVGEPPFFLASSVFFAIKDAISA 1231
T GP +YKIP+ +P +F VSLL+ PN KAI++SKAVGEPP FL +SVFFAIKDAI A
Sbjct: 651 TRGPSTYKIPAFGSIPTEFRVSLLRDCPNKKAIYASKAVGEPPLFLGASVFFAIKDAIRA 710
Query: 1232 ARADAGHTG-----WFPLDNPATPERIRMACLDEFT 1262
ARA HT F LD+PATPE+IR AC+D+FT
Sbjct: 711 ARAQ--HTNNNTKELFRLDSPATPEKIRNACVDKFT 744
>pdb|3ETR|C Chain C, Crystal Structure Of Xanthine Oxidase In Complex With
Lumazine
pdb|3ETR|N Chain N, Crystal Structure Of Xanthine Oxidase In Complex With
Lumazine
pdb|3NS1|C Chain C, Crystal Structure Of Bovine Xanthine Oxidase In Complex With
6- Mercaptopurine
pdb|3NS1|L Chain L, Crystal Structure Of Bovine Xanthine Oxidase In Complex With
6- Mercaptopurine
pdb|3NVV|C Chain C, Crystal Structure Of Bovine Xanthine Oxidase In Complex With
Arsenite
pdb|3NVV|L Chain L, Crystal Structure Of Bovine Xanthine Oxidase In Complex With
Arsenite
pdb|3NVZ|C Chain C, Crystal Structure Of Bovine Xanthine Oxidase In Complex With
Indole-3- Aldehyde
pdb|3NVZ|L Chain L, Crystal Structure Of Bovine Xanthine Oxidase In Complex With
Indole-3- Aldehyde
Length = 755
Score = 728 bits (1880), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/756 (48%), Positives = 491/756 (64%), Gaps = 18/756 (2%)
Query: 512 SVGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGF 571
+VG P HL++ +Q +GEA Y DD P N L LV S R HA+I SID S A+ PGF
Sbjct: 2 TVGRPLPHLAAAMQASGEAVYCDDIPRYENELFLRLVTSTRAHAKIKSIDVSEAQKVPGF 61
Query: 572 VGIFFAEDVQGDNRIGPVVADEELFASEXXXXXXXXXXXXXAETHEEAKLASRKVQVEYE 631
V A+D+ G N G + DE +FA + A+T E A+ A+ V+V YE
Sbjct: 62 VCFLSADDIPGSNETG-LFNDETVFAKDTVTCVGHIIGAVVADTPEHAERAAHVVKVTYE 120
Query: 632 ELPAILSIQEAIDAKSFHPNTERCFRKGDVDICFQSGQCDKIIEGEVRVGGQEHFYLEPH 691
+LPAI++I++AI SF+ +E KGD+ F + D ++ GE+ +GGQ+HFYLE H
Sbjct: 121 DLPAIITIEDAIKNNSFY-GSELKIEKGDLKKGFS--EADNVVSGELYIGGQDHFYLETH 177
Query: 692 SSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKETRSAF 751
++ E+ + STQ K Q +V+ +LG+P+++++ + KR+GGGFGGKETRS
Sbjct: 178 CTIAIPKGEEGEMELFVSTQNAMKTQSFVAKMLGVPVNRILVRVKRMGGGFGGKETRSTL 237
Query: 752 IXXXXXVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLEIYNNA 811
+ + ++ PV LDR+ DM+I+G RH FL +YKVGF G ++AL+++ Y+NA
Sbjct: 238 VSVAVALAAYKTGHPVRCMLDRNEDMLITGGRHPFLARYKVGFMKTGTIVALEVDHYSNA 297
Query: 812 GNSLDLSLAVLERAMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITENWI 871
GNS DLS +++ERA+FH DN Y+IPN+R G +C TN SNTAFRGFGGPQ + I ENW+
Sbjct: 298 GNSRDLSHSIMERALFHMDNCYKIPNIRGTGRLCKTNLSSNTAFRGFGGPQALFIAENWM 357
Query: 872 QRVAVEVRKSPEEIREINFQGEGSILHYGQQLQHCTLFPLWNELKLSCDFLNARKEVDNF 931
VAV EE+R N EG + H+ Q+L+ ++ W+E S + + EVD F
Sbjct: 358 SEVAVTCGLPAEEVRWKNMYKEGDLTHFNQRLEGFSVPRCWDECLKSSQYYARKSEVDKF 417
Query: 932 NLNNRWKKRGIAMVPTKFGISFTLKLMNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVA 991
N N WKKRG+ ++PTKFGISFT+ +NQAGAL+HVYTDG+VLV+HGG EMGQGLHTK+
Sbjct: 418 NKENCWKKRGLCIIPTKFGISFTVPFLNQAGALIHVYTDGSVLVSHGGTEMGQGLHTKMV 477
Query: 992 QVAASAFNIPLSSVFVSETSTDKVPNXXXXXXXXXXDIYGAAVLDACEQIKARMEPIASK 1051
QVA+ A IP+S +++SETST+ VPN DIYG AV +AC+ I R+EP K
Sbjct: 478 QVASKALKIPISKIYISETSTNTVPNSSPTAASVSTDIYGQAVYEACQTILKRLEPFKKK 537
Query: 1052 HNFNSFAELASACYVQRIDLSAHGFYITPEIDFDWITGKGNPFRYFTYGAAFAEVEIDTL 1111
+ S+ + A Y R+ LS GFY TP + + + T GN F YFTYG A +EVEID L
Sbjct: 538 NPDGSWEDWVMAAYQDRVSLSTTGFYRTPNLGYSFETNSGNAFHYFTYGVACSEVEIDCL 597
Query: 1112 TGDFHTRMANVILDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPGCLY 1171
TGD ++++D+G SLNPAID+GQ+EGAF+QGLG LEEL + P G L+
Sbjct: 598 TGDHKNLRTDIVMDVGSSLNPAIDIGQVEGAFVQGLGLFTLEELHYS-------PEGSLH 650
Query: 1172 TCGPGSYKIPSLNDVPLKFNVSLLKGHPNVKAIHSSKAVGEPPFFLASSVFFAIKDAISA 1231
T GP +YKIP+ +P +F VSLL+ PN KAI++SKAVGEPP FL +SVFFAIKDAI A
Sbjct: 651 TRGPSTYKIPAFGSIPTEFRVSLLRDCPNKKAIYASKAVGEPPLFLGASVFFAIKDAIRA 710
Query: 1232 ARADAGHTG-----WFPLDNPATPERIRMACLDEFT 1262
ARA HT F LD+PATPE+IR AC+D+FT
Sbjct: 711 ARAQ--HTNNNTKELFRLDSPATPEKIRNACVDKFT 744
>pdb|1FIQ|C Chain C, Crystal Structure Of Xanthine Oxidase From Bovine Milk
pdb|3B9J|C Chain C, Structure Of Xanthine Oxidase With 2-Hydroxy-6-Methylpurine
pdb|3B9J|K Chain K, Structure Of Xanthine Oxidase With 2-Hydroxy-6-Methylpurine
Length = 763
Score = 728 bits (1879), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/756 (48%), Positives = 491/756 (64%), Gaps = 18/756 (2%)
Query: 512 SVGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGF 571
+VG P HL++ +Q +GEA Y DD P N L LV S R HA+I SID S A+ PGF
Sbjct: 3 TVGRPLPHLAAAMQASGEAVYCDDIPRYENELFLRLVTSTRAHAKIKSIDVSEAQKVPGF 62
Query: 572 VGIFFAEDVQGDNRIGPVVADEELFASEXXXXXXXXXXXXXAETHEEAKLASRKVQVEYE 631
V A+D+ G N G + DE +FA + A+T E A+ A+ V+V YE
Sbjct: 63 VCFLSADDIPGSNETG-LFNDETVFAKDTVTCVGHIIGAVVADTPEHAERAAHVVKVTYE 121
Query: 632 ELPAILSIQEAIDAKSFHPNTERCFRKGDVDICFQSGQCDKIIEGEVRVGGQEHFYLEPH 691
+LPAI++I++AI SF+ +E KGD+ F + D ++ GE+ +GGQ+HFYLE H
Sbjct: 122 DLPAIITIEDAIKNNSFY-GSELKIEKGDLKKGFS--EADNVVSGELYIGGQDHFYLETH 178
Query: 692 SSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKETRSAF 751
++ E+ + STQ K Q +V+ +LG+P+++++ + KR+GGGFGGKETRS
Sbjct: 179 CTIAIPKGEEGEMELFVSTQNAMKTQSFVAKMLGVPVNRILVRVKRMGGGFGGKETRSTL 238
Query: 752 IXXXXXVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLEIYNNA 811
+ + ++ PV LDR+ DM+I+G RH FL +YKVGF G ++AL+++ Y+NA
Sbjct: 239 VSVAVALAAYKTGHPVRCMLDRNEDMLITGGRHPFLARYKVGFMKTGTIVALEVDHYSNA 298
Query: 812 GNSLDLSLAVLERAMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITENWI 871
GNS DLS +++ERA+FH DN Y+IPN+R G +C TN SNTAFRGFGGPQ + I ENW+
Sbjct: 299 GNSRDLSHSIMERALFHMDNCYKIPNIRGTGRLCKTNLSSNTAFRGFGGPQALFIAENWM 358
Query: 872 QRVAVEVRKSPEEIREINFQGEGSILHYGQQLQHCTLFPLWNELKLSCDFLNARKEVDNF 931
VAV EE+R N EG + H+ Q+L+ ++ W+E S + + EVD F
Sbjct: 359 SEVAVTCGLPAEEVRWKNMYKEGDLTHFNQRLEGFSVPRCWDECLKSSQYYARKSEVDKF 418
Query: 932 NLNNRWKKRGIAMVPTKFGISFTLKLMNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVA 991
N N WKKRG+ ++PTKFGISFT+ +NQAGAL+HVYTDG+VLV+HGG EMGQGLHTK+
Sbjct: 419 NKENCWKKRGLCIIPTKFGISFTVPFLNQAGALIHVYTDGSVLVSHGGTEMGQGLHTKMV 478
Query: 992 QVAASAFNIPLSSVFVSETSTDKVPNXXXXXXXXXXDIYGAAVLDACEQIKARMEPIASK 1051
QVA+ A IP+S +++SETST+ VPN DIYG AV +AC+ I R+EP K
Sbjct: 479 QVASKALKIPISKIYISETSTNTVPNSSPTAASVSTDIYGQAVYEACQTILKRLEPFKKK 538
Query: 1052 HNFNSFAELASACYVQRIDLSAHGFYITPEIDFDWITGKGNPFRYFTYGAAFAEVEIDTL 1111
+ S+ + A Y R+ LS GFY TP + + + T GN F YFTYG A +EVEID L
Sbjct: 539 NPDGSWEDWVMAAYQDRVSLSTTGFYRTPNLGYSFETNSGNAFHYFTYGVACSEVEIDCL 598
Query: 1112 TGDFHTRMANVILDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPGCLY 1171
TGD ++++D+G SLNPAID+GQ+EGAF+QGLG LEEL + P G L+
Sbjct: 599 TGDHKNLRTDIVMDVGSSLNPAIDIGQVEGAFVQGLGLFTLEELHYS-------PEGSLH 651
Query: 1172 TCGPGSYKIPSLNDVPLKFNVSLLKGHPNVKAIHSSKAVGEPPFFLASSVFFAIKDAISA 1231
T GP +YKIP+ +P +F VSLL+ PN KAI++SKAVGEPP FL +SVFFAIKDAI A
Sbjct: 652 TRGPSTYKIPAFGSIPTEFRVSLLRDCPNKKAIYASKAVGEPPLFLGASVFFAIKDAIRA 711
Query: 1232 ARADAGHTG-----WFPLDNPATPERIRMACLDEFT 1262
ARA HT F LD+PATPE+IR AC+D+FT
Sbjct: 712 ARAQ--HTNNNTKELFRLDSPATPEKIRNACVDKFT 745
>pdb|1JRO|B Chain B, Crystal Structure Of Xanthine Dehydrogenase From Rhodobacter
Capsulatus
pdb|1JRO|D Chain D, Crystal Structure Of Xanthine Dehydrogenase From Rhodobacter
Capsulatus
pdb|1JRO|F Chain F, Crystal Structure Of Xanthine Dehydrogenase From Rhodobacter
Capsulatus
pdb|1JRO|H Chain H, Crystal Structure Of Xanthine Dehydrogenase From Rhodobacter
Capsulatus
pdb|1JRP|B Chain B, Crystal Structure Of Xanthine Dehydrogenase Inhibited By
Alloxanthine From Rhodobacter Capsulatus
pdb|1JRP|D Chain D, Crystal Structure Of Xanthine Dehydrogenase Inhibited By
Alloxanthine From Rhodobacter Capsulatus
pdb|1JRP|F Chain F, Crystal Structure Of Xanthine Dehydrogenase Inhibited By
Alloxanthine From Rhodobacter Capsulatus
pdb|1JRP|H Chain H, Crystal Structure Of Xanthine Dehydrogenase Inhibited By
Alloxanthine From Rhodobacter Capsulatus
pdb|2W3R|B Chain B, Crystal Structure Of Xanthine Dehydrogenase (Desulfo Form)
From Rhodobacter Capsulatus In Complex With Hypoxanthine
pdb|2W3R|D Chain D, Crystal Structure Of Xanthine Dehydrogenase (Desulfo Form)
From Rhodobacter Capsulatus In Complex With Hypoxanthine
pdb|2W3R|F Chain F, Crystal Structure Of Xanthine Dehydrogenase (Desulfo Form)
From Rhodobacter Capsulatus In Complex With Hypoxanthine
pdb|2W3R|H Chain H, Crystal Structure Of Xanthine Dehydrogenase (Desulfo Form)
From Rhodobacter Capsulatus In Complex With Hypoxanthine
pdb|2W3S|B Chain B, Crystal Structure Of Xanthine Dehydrogenase (Desulfo Form)
From Rhodobacter Capsulatus In Complex With Xanthine
pdb|2W3S|D Chain D, Crystal Structure Of Xanthine Dehydrogenase (Desulfo Form)
From Rhodobacter Capsulatus In Complex With Xanthine
pdb|2W3S|F Chain F, Crystal Structure Of Xanthine Dehydrogenase (Desulfo Form)
From Rhodobacter Capsulatus In Complex With Xanthine
pdb|2W3S|H Chain H, Crystal Structure Of Xanthine Dehydrogenase (Desulfo Form)
From Rhodobacter Capsulatus In Complex With Xanthine
pdb|2W54|B Chain B, Crystal Structure Of Xanthine Dehydrogenase From Rhodobacter
Capsulatus In Complex With Bound Inhibitor
Pterin-6-Aldehyde
pdb|2W54|D Chain D, Crystal Structure Of Xanthine Dehydrogenase From Rhodobacter
Capsulatus In Complex With Bound Inhibitor
Pterin-6-Aldehyde
pdb|2W54|F Chain F, Crystal Structure Of Xanthine Dehydrogenase From Rhodobacter
Capsulatus In Complex With Bound Inhibitor
Pterin-6-Aldehyde
pdb|2W54|H Chain H, Crystal Structure Of Xanthine Dehydrogenase From Rhodobacter
Capsulatus In Complex With Bound Inhibitor
Pterin-6-Aldehyde
Length = 777
Score = 518 bits (1335), Expect = e-147, Method: Compositional matrix adjust.
Identities = 313/784 (39%), Positives = 418/784 (53%), Gaps = 55/784 (7%)
Query: 512 SVGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGF 571
SVG P H S+R VTG+A Y DD P P N LH A LS A I +D R SPG
Sbjct: 2 SVGKPLPHDSARAHVTGQARYLDDLPCPANTLHLAFGLSTEASAAITGLDLEPVRESPGV 61
Query: 572 VGIFFAEDVQGDNRIGPVVADEELFASEXXXXXXXXXXXXXAETHEEAKLASRKVQVEYE 631
+ +F A D+ DN P + E + A+ A +H A++A+RK ++ Y
Sbjct: 62 IAVFTAADLPHDNDASPAPSPEPVLATGEVHFVGQPIFLVAATSHRAARIAARKARITYA 121
Query: 632 ELPAILSIQEAIDAKSFHPNTERCFRKGDVDICFQSGQCDKIIEGEVRVGGQEHFYLEPH 691
PAIL++ +A+ A S + +GDV+ + EG +GGQEHFYLE
Sbjct: 122 PRPAILTLDQALAADSRFEGGPVIWARGDVETALAGAA--HLAEGCFEIGGQEHFYLEGQ 179
Query: 692 SSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKETRSAF 751
+++ + G +H S+Q P + Q V+H LGL V + +R+GGGFGGKE++
Sbjct: 180 AALALPAEGGVVIH--CSSQHPSEIQHKVAHALGLAFHDVRVEMRRMGGGFGGKESQGNH 237
Query: 752 IXXXXXVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLEIYNNA 811
+ V + RP + DRD DM+I+G+RH F +Y++G GK+L D
Sbjct: 238 LAIACAVAARATGRPCKMRYDRDDDMVITGKRHDFRIRYRIGADASGKLLGADFVHLARC 297
Query: 812 GNSLDLSLAVLERAMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITENWI 871
G S DLSL V +RAM H+D Y +P +RI + TN SNTAFRGFGGPQG L E I
Sbjct: 298 GWSADLSLPVCDRAMLHADGSYFVPALRIESHRLRTNTQSNTAFRGFGGPQGALGMERAI 357
Query: 872 QRVAVEVRKSPEEIREINF--------------------QGEGSILHYGQQLQHCTLFPL 911
+ +A + + P E+R +NF + HYGQ++ C L L
Sbjct: 358 EHLARGMGRDPAELRALNFYDPPERGGLSAPPSPPEPIATKKTQTTHYGQEVADCVLGEL 417
Query: 912 WNELKLSCDFLNARKEVDNFNLNNRWKKRGIAMVPTKFGISFTLKLMNQAGALVHVYTDG 971
L+ S +F R E+ +N NR RGIA+ P KFGISFTL +NQAGALV +YTDG
Sbjct: 418 VTRLQKSANFTTRRAEIAAWNSTNRTLARGIALSPVKFGISFTLTHLNQAGALVQIYTDG 477
Query: 972 TVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETSTDKVPNXXXXXXXXXXDIYG 1031
+V + HGG EMGQGLH K+ QVAA+ I V ++ T T KVPN D+ G
Sbjct: 478 SVALNHGGTEMGQGLHAKMVQVAAAVLGIDPVQVRITATDTSKVPNTSATAASSGADMNG 537
Query: 1032 AAVLDACEQIKARMEPIASKHN--------FNS-----------FAELASACYVQRIDLS 1072
AV DACE ++ R+ + F++ FAE+ +A Y+ RI LS
Sbjct: 538 MAVKDACETLRGRLAGFVAAREGCAARDVIFDAGQVQASGKSWRFAEIVAAAYMARISLS 597
Query: 1073 AHGFYITPEIDFDWITGKGNPFRYFTYGAAFAEVEIDTLTGDFHTRMANVILDLGYSLNP 1132
A GFY TP++ +D + G+G PF YF YGAA EV ID LTG+ +++ D G SLNP
Sbjct: 598 ATGFYATPKLSWDRLRGQGRPFLYFAYGAAITEVVIDRLTGENRILRTDILHDAGASLNP 657
Query: 1133 AIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPGCLYTCGPGSYKIPSLNDVPLKFNV 1192
A+D+GQIEGA++QG GWL EEL W G L T P +YKIP+ +D P FNV
Sbjct: 658 ALDIGQIEGAYVQGAGWLTTEELVWDHC-------GRLMTHAPSTYKIPAFSDRPRIFNV 710
Query: 1193 SLLKGHPNVKAIHSSKAVGEPPFFLASSVFFAIKDAISAARADAGHTGWFPLDNPATPER 1252
+L + I SKAVGEPPF L S F A+ DA +A W L PATPE
Sbjct: 711 ALWDQPNREETIFRSKAVGEPPFLLGISAFLALHDACAACGPH-----WPDLQAPATPEA 765
Query: 1253 IRMA 1256
+ A
Sbjct: 766 VLAA 769
>pdb|2W55|B Chain B, Crystal Structure Of Xanthine Dehydrogenase (E232q Variant)
From Rhodobacter Capsulatus In Complex With Hypoxanthine
pdb|2W55|D Chain D, Crystal Structure Of Xanthine Dehydrogenase (E232q Variant)
From Rhodobacter Capsulatus In Complex With Hypoxanthine
pdb|2W55|F Chain F, Crystal Structure Of Xanthine Dehydrogenase (E232q Variant)
From Rhodobacter Capsulatus In Complex With Hypoxanthine
pdb|2W55|H Chain H, Crystal Structure Of Xanthine Dehydrogenase (E232q Variant)
From Rhodobacter Capsulatus In Complex With Hypoxanthine
Length = 777
Score = 517 bits (1332), Expect = e-146, Method: Compositional matrix adjust.
Identities = 312/784 (39%), Positives = 418/784 (53%), Gaps = 55/784 (7%)
Query: 512 SVGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGF 571
SVG P H S+R VTG+A Y DD P P N LH A LS A I +D R SPG
Sbjct: 2 SVGKPLPHDSARAHVTGQARYLDDLPCPANTLHLAFGLSTEASAAITGLDLEPVRESPGV 61
Query: 572 VGIFFAEDVQGDNRIGPVVADEELFASEXXXXXXXXXXXXXAETHEEAKLASRKVQVEYE 631
+ +F A D+ DN P + E + A+ A +H A++A+RK ++ Y
Sbjct: 62 IAVFTAADLPHDNDASPAPSPEPVLATGEVHFVGQPIFLVAATSHRAARIAARKARITYA 121
Query: 632 ELPAILSIQEAIDAKSFHPNTERCFRKGDVDICFQSGQCDKIIEGEVRVGGQEHFYLEPH 691
PAIL++ +A+ A S + +GDV+ + EG +GGQEHFYLE
Sbjct: 122 PRPAILTLDQALAADSRFEGGPVIWARGDVETALAGAA--HLAEGCFEIGGQEHFYLEGQ 179
Query: 692 SSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKETRSAF 751
+++ + G +H S+Q P + Q V+H LGL V + +R+GGGFGGK+++
Sbjct: 180 AALALPAEGGVVIH--CSSQHPSEIQHKVAHALGLAFHDVRVEMRRMGGGFGGKQSQGNH 237
Query: 752 IXXXXXVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLEIYNNA 811
+ V + RP + DRD DM+I+G+RH F +Y++G GK+L D
Sbjct: 238 LAIACAVAARATGRPCKMRYDRDDDMVITGKRHDFRIRYRIGADASGKLLGADFVHLARC 297
Query: 812 GNSLDLSLAVLERAMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITENWI 871
G S DLSL V +RAM H+D Y +P +RI + TN SNTAFRGFGGPQG L E I
Sbjct: 298 GWSADLSLPVCDRAMLHADGSYFVPALRIESHRLRTNTQSNTAFRGFGGPQGALGMERAI 357
Query: 872 QRVAVEVRKSPEEIREINF--------------------QGEGSILHYGQQLQHCTLFPL 911
+ +A + + P E+R +NF + HYGQ++ C L L
Sbjct: 358 EHLARGMGRDPAELRALNFYDPPERGGLSAPPSPPEPIATKKTQTTHYGQEVADCVLGEL 417
Query: 912 WNELKLSCDFLNARKEVDNFNLNNRWKKRGIAMVPTKFGISFTLKLMNQAGALVHVYTDG 971
L+ S +F R E+ +N NR RGIA+ P KFGISFTL +NQAGALV +YTDG
Sbjct: 418 VTRLQKSANFTTRRAEIAAWNSTNRTLARGIALSPVKFGISFTLTHLNQAGALVQIYTDG 477
Query: 972 TVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETSTDKVPNXXXXXXXXXXDIYG 1031
+V + HGG EMGQGLH K+ QVAA+ I V ++ T T KVPN D+ G
Sbjct: 478 SVALNHGGTEMGQGLHAKMVQVAAAVLGIDPVQVRITATDTSKVPNTSATAASSGADMNG 537
Query: 1032 AAVLDACEQIKARMEPIASKHN--------FNS-----------FAELASACYVQRIDLS 1072
AV DACE ++ R+ + F++ FAE+ +A Y+ RI LS
Sbjct: 538 MAVKDACETLRGRLAGFVAAREGCAARDVIFDAGQVQASGKSWRFAEIVAAAYMARISLS 597
Query: 1073 AHGFYITPEIDFDWITGKGNPFRYFTYGAAFAEVEIDTLTGDFHTRMANVILDLGYSLNP 1132
A GFY TP++ +D + G+G PF YF YGAA EV ID LTG+ +++ D G SLNP
Sbjct: 598 ATGFYATPKLSWDRLRGQGRPFLYFAYGAAITEVVIDRLTGENRILRTDILHDAGASLNP 657
Query: 1133 AIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPGCLYTCGPGSYKIPSLNDVPLKFNV 1192
A+D+GQIEGA++QG GWL EEL W G L T P +YKIP+ +D P FNV
Sbjct: 658 ALDIGQIEGAYVQGAGWLTTEELVWDHC-------GRLMTHAPSTYKIPAFSDRPRIFNV 710
Query: 1193 SLLKGHPNVKAIHSSKAVGEPPFFLASSVFFAIKDAISAARADAGHTGWFPLDNPATPER 1252
+L + I SKAVGEPPF L S F A+ DA +A W L PATPE
Sbjct: 711 ALWDQPNREETIFRSKAVGEPPFLLGISAFLALHDACAACGPH-----WPDLQAPATPEA 765
Query: 1253 IRMA 1256
+ A
Sbjct: 766 VLAA 769
>pdb|3NVV|B Chain B, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With Arsenite
pdb|3NVV|K Chain K, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With Arsenite
pdb|3NVW|B Chain B, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With Guanine
pdb|3NVW|K Chain K, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With Guanine
pdb|3NVY|B Chain B, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With Quercetin
pdb|3NVY|K Chain K, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With Quercetin
Length = 334
Score = 241 bits (616), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 137/318 (43%), Positives = 195/318 (61%), Gaps = 10/318 (3%)
Query: 137 YEPVSYSEIDGSTYTEKELIFPPELLLRKSNPLNLSGFGG--LKWYRPLKLQHLLELKSK 194
+ P + +D + +E IFPPELL K P F G + W + L+ LL+LK++
Sbjct: 2 FNPEEFMPLDPT----QEPIFPPELLRLKDVPPKQLRFEGERVTWIQASTLKELLDLKAQ 57
Query: 195 YPDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELLKM 254
+P++KL+VGNTE+GIEM+ K + ++I +PELN + +G+ GAA L+ + K
Sbjct: 58 HPEAKLVVGNTEIGIEMKFKNQLFPMIICPAWIPELNAVEHGPEGISFGAACALSSVEKT 117
Query: 255 FRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPLWMASGAK 314
+ V + P +T + +EQ++WFAG Q+K+VAS+GGNI TASPISDLNP++MASG K
Sbjct: 118 LLEAVAKLPTQKTEVFRGVLEQLRWFAGKQVKSVASLGGNIITASPISDLNPVFMASGTK 177
Query: 315 FHIVDCKGNIRTT-MAEEFFLGYRKVDLTSGEILLSIFLPWTRPFEFVKEFKQAHRRDDD 373
IV +G RT M FF YRK L EILLSI +P++R EF FKQA RR+DD
Sbjct: 178 LTIVS-RGTRRTVPMDHTFFPSYRKTLLGPEEILLSIEIPYSREDEFFSAFKQASRREDD 236
Query: 374 IALVNAGMRVYLEEKDEEWVVSDALLVYGGVAPLSLSAKKTKTFIVGKSWSQELLQNALK 433
IA V GMRV + + V + L YGG+A ++SA KT + K W+++LLQ+
Sbjct: 237 IAKVTCGMRVLFQPGSMQ--VKELALCYGGMADRTISALKTTQKQLSKFWNEKLLQDVCA 294
Query: 434 ILQTDIILKEDAPGGMVD 451
L ++ L DAPGGM++
Sbjct: 295 GLAEELSLSPDAPGGMIE 312
>pdb|3B9J|B Chain B, Structure Of Xanthine Oxidase With
2-Hydroxy-6-Methylpurine
pdb|3B9J|J Chain J, Structure Of Xanthine Oxidase With
2-Hydroxy-6-Methylpurine
Length = 350
Score = 229 bits (584), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 123/274 (44%), Positives = 175/274 (63%), Gaps = 4/274 (1%)
Query: 179 WYRPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDD 238
W + L+ LL+LK+++P++KL+VGNTE+GIEM+ K + ++I +PELN + +
Sbjct: 17 WIQASTLKELLDLKAQHPEAKLVVGNTEIGIEMKFKNQLFPMIICPAWIPELNAVEHGPE 76
Query: 239 GLEIGAAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTA 298
G+ GAA L+ + K + V + P +T + +EQ++WFAG Q+K+VAS+GGNI TA
Sbjct: 77 GISFGAACALSSVEKTLLEAVAKLPTQKTEVFRGVLEQLRWFAGKQVKSVASLGGNIITA 136
Query: 299 SPISDLNPLWMASGAKFHIVDCKGNIRTT-MAEEFFLGYRKVDLTSGEILLSIFLPWTRP 357
SPISDLNP++MASG K IV +G RT M FF YRK L EILLSI +P++R
Sbjct: 137 SPISDLNPVFMASGTKLTIVS-RGTRRTVPMDHTFFPSYRKTLLGPEEILLSIEIPYSRE 195
Query: 358 FEFVKEFKQAHRRDDDIALVNAGMRVYLEEKDEEWVVSDALLVYGGVAPLSLSAKKTKTF 417
EF FKQA RR+DDIA V GMRV + + V + L YGG+A ++SA KT
Sbjct: 196 DEFFSAFKQASRREDDIAKVTCGMRVLFQPGSMQ--VKELALCYGGMADRTISALKTTQK 253
Query: 418 IVGKSWSQELLQNALKILQTDIILKEDAPGGMVD 451
+ K W+++LLQ+ L ++ L DAPGGM++
Sbjct: 254 QLSKFWNEKLLQDVCAGLAEELSLSPDAPGGMIE 287
>pdb|1FIQ|B Chain B, Crystal Structure Of Xanthine Oxidase From Bovine Milk
Length = 350
Score = 229 bits (584), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 123/274 (44%), Positives = 175/274 (63%), Gaps = 4/274 (1%)
Query: 179 WYRPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDD 238
W + L+ LL+LK+++P++KL+VGNTE+GIEM+ K + ++I +PELN + +
Sbjct: 17 WIQASTLKELLDLKAQHPEAKLVVGNTEIGIEMKFKNQLFPMIICPAWIPELNAVEHGPE 76
Query: 239 GLEIGAAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTA 298
G+ GAA L+ + K + V + P +T + +EQ++WFAG Q+K+VAS+GGNI TA
Sbjct: 77 GISFGAACALSSVEKTLLEAVAKLPTQKTEVFRGVLEQLRWFAGKQVKSVASLGGNIITA 136
Query: 299 SPISDLNPLWMASGAKFHIVDCKGNIRTT-MAEEFFLGYRKVDLTSGEILLSIFLPWTRP 357
SPISDLNP++MASG K IV +G RT M FF YRK L EILLSI +P++R
Sbjct: 137 SPISDLNPVFMASGTKLTIVS-RGTRRTVPMDHTFFPSYRKTLLGPEEILLSIEIPYSRE 195
Query: 358 FEFVKEFKQAHRRDDDIALVNAGMRVYLEEKDEEWVVSDALLVYGGVAPLSLSAKKTKTF 417
EF FKQA RR+DDIA V GMRV + + V + L YGG+A ++SA KT
Sbjct: 196 DEFFSAFKQASRREDDIAKVTCGMRVLFQPGSMQ--VKELALCYGGMADRTISALKTTQK 253
Query: 418 IVGKSWSQELLQNALKILQTDIILKEDAPGGMVD 451
+ K W+++LLQ+ L ++ L DAPGGM++
Sbjct: 254 QLSKFWNEKLLQDVCAGLAEELSLSPDAPGGMIE 287
>pdb|3ETR|B Chain B, Crystal Structure Of Xanthine Oxidase In Complex With
Lumazine
pdb|3ETR|M Chain M, Crystal Structure Of Xanthine Oxidase In Complex With
Lumazine
pdb|3EUB|B Chain B, Crystal Structure Of Desulfo-Xanthine Oxidase With
Xanthine
pdb|3EUB|K Chain K, Crystal Structure Of Desulfo-Xanthine Oxidase With
Xanthine
pdb|3EUB|T Chain T, Crystal Structure Of Desulfo-Xanthine Oxidase With
Xanthine
pdb|3EUB|3 Chain 3, Crystal Structure Of Desulfo-Xanthine Oxidase With
Xanthine
pdb|3NRZ|B Chain B, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With Hypoxanthine
pdb|3NRZ|K Chain K, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With Hypoxanthine
pdb|3NS1|B Chain B, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With 6- Mercaptopurine
pdb|3NS1|K Chain K, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With 6- Mercaptopurine
pdb|3NVZ|B Chain B, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With Indole-3- Aldehyde
pdb|3NVZ|K Chain K, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With Indole-3- Aldehyde
pdb|3SR6|B Chain B, Crystal Structure Of Reduced Bovine Xanthine Oxidase In
Complex With Arsenite
pdb|3SR6|K Chain K, Crystal Structure Of Reduced Bovine Xanthine Oxidase In
Complex With Arsenite
Length = 305
Score = 229 bits (583), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 123/274 (44%), Positives = 175/274 (63%), Gaps = 4/274 (1%)
Query: 179 WYRPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDD 238
W + L+ LL+LK+++P++KL+VGNTE+GIEM+ K + ++I +PELN + +
Sbjct: 13 WIQASTLKELLDLKAQHPEAKLVVGNTEIGIEMKFKNQLFPMIICPAWIPELNAVEHGPE 72
Query: 239 GLEIGAAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTA 298
G+ GAA L+ + K + V + P +T + +EQ++WFAG Q+K+VAS+GGNI TA
Sbjct: 73 GISFGAACALSSVEKTLLEAVAKLPTQKTEVFRGVLEQLRWFAGKQVKSVASLGGNIITA 132
Query: 299 SPISDLNPLWMASGAKFHIVDCKGNIRTT-MAEEFFLGYRKVDLTSGEILLSIFLPWTRP 357
SPISDLNP++MASG K IV +G RT M FF YRK L EILLSI +P++R
Sbjct: 133 SPISDLNPVFMASGTKLTIVS-RGTRRTVPMDHTFFPSYRKTLLGPEEILLSIEIPYSRE 191
Query: 358 FEFVKEFKQAHRRDDDIALVNAGMRVYLEEKDEEWVVSDALLVYGGVAPLSLSAKKTKTF 417
EF FKQA RR+DDIA V GMRV + + V + L YGG+A ++SA KT
Sbjct: 192 DEFFSAFKQASRREDDIAKVTCGMRVLFQPGSMQ--VKELALCYGGMADRTISALKTTQK 249
Query: 418 IVGKSWSQELLQNALKILQTDIILKEDAPGGMVD 451
+ K W+++LLQ+ L ++ L DAPGGM++
Sbjct: 250 QLSKFWNEKLLQDVCAGLAEELSLSPDAPGGMIE 283
>pdb|3HRD|A Chain A, Crystal Structure Of Nicotinate Dehydrogenase
pdb|3HRD|E Chain E, Crystal Structure Of Nicotinate Dehydrogenase
Length = 425
Score = 181 bits (458), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 121/410 (29%), Positives = 199/410 (48%), Gaps = 18/410 (4%)
Query: 502 QDYEITKHGTSVGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSID 561
+DY++ +G +V + S +V G A++ D P + L+A + S PHARI+S+D
Sbjct: 3 KDYQV------LGKNKVKVDSLEKVMGTAKFAADYSFP-DMLYAGVFRSTVPHARIVSLD 55
Query: 562 DSGARSSPGFVGIFFAEDVQGDNRIGPVVADEELFASEXXXXXXXXXXXXXAETHEEAKL 621
S AR+ G + + G NR G ++ DE + A+T + +
Sbjct: 56 LSKARAIDGVEAVLDYHAIPGKNRFGIIIKDEPCLVDDKVRRYGDAIAVVAAQTPDLVQE 115
Query: 622 ASRKVQVEYEELPAILSIQEAI--DAKSFHPNTE----RCFRKGDVDICFQSGQCDKIIE 675
A + +EYEEL I +++ A+ D+ + H +T + GDVD F+ QCD ++E
Sbjct: 116 ALDAITIEYEELEGIFTMERALEEDSPAIHGDTNIHQVKHLEYGDVDAAFK--QCDIVVE 173
Query: 676 GEVRVGGQEHFYLEPHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKT 735
H ++EP + V + D+ + ++ STQ P + V+ +L LP SKV
Sbjct: 174 DTYSTHRLTHMFIEPDAGVSY-YDNEGMLTVVVSTQNPHYDRGEVAGMLALPNSKVRIIQ 232
Query: 736 KRIGGGFGGKETRSAFIXXXXXVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFT 795
GGGFGGK S + + ++ +PV + R+ +S +RH K G T
Sbjct: 233 ATTGGGFGGKLDLS--VQCHCALLTYHTKKPVKMVRSREESTTVSSKRHPMTMHCKTGAT 290
Query: 796 NEGKVLALDLEIYNNAGNSLDLSLAVLERAMFHSDNVYEIPNVRIMGNVCFTNFPSNTAF 855
+G++ A+ +E++ + G AV+ RA H Y +PNVR+ +TN P + AF
Sbjct: 291 KDGRLQAVQVEMFGDTGAYASYGPAVITRATVHCMGPYVVPNVRVDAKFVYTNNPMSGAF 350
Query: 856 RGFGGPQGMLITENWIQRVAVEVRKSPEEIREINFQGEGSILHYGQQLQH 905
RGFG PQ + E + +A + P +IR +N G+ L GQ L++
Sbjct: 351 RGFGVPQASVCHEGQMNALAKALGMDPIDIRILNAHQVGAKLATGQVLEN 400
>pdb|1SIJ|A Chain A, Crystal Structure Of The Aldehyde Dehydrogenase (A.K.A. Aor
Or Mop) Of Desulfovibrio Gigas Covalently Bound To
[aso3]-
pdb|1VLB|A Chain A, Structure Refinement Of The Aldehyde Oxidoreductase From
Desulfovibrio Gigas At 1.28 A
pdb|3FAH|A Chain A, Glycerol Inhibited Form Of Aldehyde Oxidoreductase From
Desulfovibrio Gigas
pdb|3FC4|A Chain A, Ethylene Glycol Inhibited Form Of Aldehyde Oxidoreductase
From Desulfovibrio Gigas
pdb|3L4P|A Chain A, Crystal Structure Of The Aldehyde Dehydrogenase (A.K.A. Aor
Or Mop) Of Desulfovibrio Gigas Covalently Bound To
[aso3]-
Length = 907
Score = 179 bits (454), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 209/781 (26%), Positives = 324/781 (41%), Gaps = 75/781 (9%)
Query: 503 DYEITKHGTSVGSPEVHLSSRLQVTGEAEYTDDT--PMPPNCLHAALVLSRRPHARILSI 560
++++ G GS ++ +VTG +Y D MP LH A+V ++ HA I I
Sbjct: 166 EFKMPADGRIWGSKYPRPTAVAKVTGTLDYGADLGLKMPAGTLHLAMVQAKVSHANIKGI 225
Query: 561 DDSGARSSPGFVGIFFAEDVQGDNRIGPVVA---------DEELFASEXXXXXXXXXXXX 611
D S A + PG + +DV+G NRI ++ D + E
Sbjct: 226 DTSEALTMPGVHSVITHKDVKGKNRITGLITFPTNKGDGWDRPILCDEKVFQYGDCIALV 285
Query: 612 XAETHEEAKLASRKVQVEYEELPAILS--IQEAIDAKSFHPNT-----ERCFRKG-DVDI 663
A++ A+ A+ KV+V+ EELPA +S A DA HP T E+ KG D
Sbjct: 286 CADSEANARAAAEKVKVDLEELPAYMSGPAAAAEDAIEIHPGTPNVYFEQPIVKGEDTGP 345
Query: 664 CFQSGQCDKIIEGEVRVGGQEHFYLEPHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHV 723
F S D +EG+ VG Q H +EP + + D G + ++ S + H ++
Sbjct: 346 IFAS--ADVTVEGDFYVGRQPHMPIEPDVAFAYMGDDG-KCYIHSKSIGVHLHLYMIAPG 402
Query: 724 LGLPMSKVVCKTKRIGGGFGGK--ETRSAFIXXXXXVPSFLLNRPVNLTLDRDIDMMISG 781
+GL ++V +GG FG K T A + V + RPV+L + +G
Sbjct: 403 VGLEPDQLVLVANPMGGTFGYKFSPTSEALVA----VAAMATGRPVHLRYNYQQQQQYTG 458
Query: 782 QRHSFLGKYKVGFTNEGKVLALDLEIYNNAGNSLDLS-LAVLERAMFHSDNVYEIPNVRI 840
+R + K +G +LA++ + + G + L L A F Y IPN+R
Sbjct: 459 KRSPWEMNVKFAAKKDGTLLAMESDWLVDHGPYSEFGDLLTLRGAQFIGAG-YNIPNIRG 517
Query: 841 MGNVCFTNFPSNTAFRGFGGPQGMLITENWIQRVAVEVRKSPEEIREINFQGEGSILHYG 900
+G TN +AFRG+G PQ M +E + +A ++ P E+R N G G
Sbjct: 518 LGRTVATNHVWGSAFRGYGAPQSMFASECLMDMLAEKLGMDPLELRYKNAYRPGDTNPTG 577
Query: 901 QQLQHCTLFPLWNEL--KLSCDFLNARKEVDNFNLNNRWKKRGIAMVPTKFGISFTLKLM 958
Q+ + +L + ++L K A+KE + K+G+ + +G L
Sbjct: 578 QEPEVFSLPDMIDQLRPKYQAALEKAQKE------STATHKKGVGISIGVYGSG--LDGP 629
Query: 959 NQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAASAF---NIPLSSVFVSETSTDKV 1015
+ + A + DGT+ V + GQG A A + + + +T
Sbjct: 630 DASEAWAELNADGTITVHTAWEDHGQGADIGCVGTAHEALRPMGVAPEKIKFTWPNTATT 689
Query: 1016 PNXXXXXXXXXXDIYGAAVLDACEQI-KARMEPIASKHNFNSFAELASACYVQRI--DLS 1072
PN + G A+ ACE + KA +P + ++ EL +A +I + +
Sbjct: 690 PNSGPSGGSRQQVMTGNAIRVACENLLKACEKPGGGYYTYD---ELKAADKPTKITGNWT 746
Query: 1073 AHGFYITPEIDFDWITGKGNPFRYFTYGAAFAEVEIDTLTGDFHTRMANVILDLGYSLNP 1132
A G D +TG G PF + YG AEV +D TG ++ DLG N
Sbjct: 747 ASG-----ATHCDAVTGLGKPFVVYMYGVFMAEVTVDVATGQTTVDGMTLMADLGSLCNQ 801
Query: 1133 AIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPGCLYTCGPGSYKIPSLNDVPLKFNV 1192
GQI G QG+G LAL E H + G G P + +P K ++
Sbjct: 802 LATDGQIYGGLAQGIG-LALSEDFEDIKKHATL-------VGAG---FPFIKQIPDKLDI 850
Query: 1193 SLLKGHPNVKAIHSSKAVGEPPFFLASSVFFAIKDAISAARADAGHTGWFPLDNPATPER 1252
+ HP + VGE P +S AI +AI +A TG PA PE+
Sbjct: 851 VYVN-HPRPDGPFGASGVGELPL---TSPHAAIINAIKSA------TGVRIYRLPAYPEK 900
Query: 1253 I 1253
+
Sbjct: 901 V 901
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 40/62 (64%), Gaps = 3/62 (4%)
Query: 21 LQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLAG--NLCRCTGYRPIV 78
LQ++ V G+QCGFC+PGFI+S LL + P+ E + + N CRCTGY+P+V
Sbjct: 88 LQKAWVLHGGAQCGFCSPGFIVSAKGLL-DTNADPSREDVRDWFQKHRNACRCTGYKPLV 146
Query: 79 DA 80
DA
Sbjct: 147 DA 148
>pdb|1DGJ|A Chain A, Crystal Structure Of The Aldehyde Oxidoreductase From
Desulfovibrio Desulfuricans Atcc 27774
Length = 907
Score = 171 bits (433), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 193/772 (25%), Positives = 308/772 (39%), Gaps = 75/772 (9%)
Query: 510 GTSVGSPEVHLSSRLQVTGEAEYTDDTP--MPPNCLHAALVLSRRPHARILSIDDSGARS 567
G+S+ P S+ +VTG AE+ D MP N LH AL ++ HA I ID S A
Sbjct: 177 GSSIPRP----SAVAKVTGLAEFGADAALRMPENTLHLALAQAKVSHALIKGIDTSEAEK 232
Query: 568 SPGFVGIFFAEDVQGDNRIG---------------PVVADEELFASEXXXXXXXXXXXXX 612
PG + +DV+G NRI P++ D ++F
Sbjct: 233 MPGVYKVLTHKDVKGKNRITGLITFPTNKGDGWERPILNDSKIF------QYGDALAIVC 286
Query: 613 AETHEEAKLASRKVQVEYEELPAILSIQEAI--DAKSFHPNTERCF-----RKGDVDICF 665
A++ A+ A+ KV+ + E LP +S EA+ DA HP T + KG+ + F
Sbjct: 287 ADSEANARAAAEKVKFDLELLPEYMSAPEAMAPDAIEIHPGTPNVYYDQLEEKGEDTVPF 346
Query: 666 QSGQCDKIIEGEVRVGGQEHFYLEPHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLG 725
+ + + EG Q H +EP + + G +V + S + A H ++ LG
Sbjct: 347 FNDPANVVAEGSYYTQRQPHLPIEPDVGYGYINEQG-QVVIHSKSVAIHLHALMIAPGLG 405
Query: 726 LPMSK-VVCKTKRIGGGFGGKETRSAFIXXXXXVPSFLLNRPVNLTLDRDIDMMISGQRH 784
L K +V GG FG K S + V RP +L + + +G+R
Sbjct: 406 LEFPKDLVLVQNTTGGTFGYK--FSPTMEALVGVAVMATGRPCHLRYNYEQQQNYTGKRS 463
Query: 785 SFLGKYKVGFTNEGKVLALDLEIYNNAGNSLDLSLAVLERAMFHSDNVYEIPNVRIMGNV 844
F + +GK+LA++ + + G + + R + Y I N+R G
Sbjct: 464 PFWTTMRYAADRQGKILAMETDWSVDHGPYSEFGDLLTLRGAQYIGAGYGIANIRGTGRT 523
Query: 845 CFTNFPSNTAFRGFGGPQGMLITENWIQRVAVEVRKSPEEIREINFQGEGSILHYGQQLQ 904
TN AFRG+G P+ +E + +A ++ P E+R +N EG GQ +
Sbjct: 524 VATNHCWGAAFRGYGAPESEFPSEVLMDELAEKLGMDPFELRALNCYREGDTTSSGQIPE 583
Query: 905 HCTLFPLWNELKLSCDFLNARKEVDNFNLNNRWKKRGIAMVPTKFGISFTLKLMNQAGAL 964
+L ++++++ + ++K V + KRG+ + +G L + + A
Sbjct: 584 VMSLPEMFDKMRPY--YEESKKRVKERSTAE--IKRGVGVALGVYGAG--LDGPDTSEAW 637
Query: 965 VHVYTDGTVLVTHGGVEMGQGLHT---KVAQVAASAFNIPLSSVFVSETSTDKVPNXXXX 1021
V + DG+V + + + GQG A A I ++ + T K PN
Sbjct: 638 VELNDDGSVTLGNSWEDHGQGADAGSLGTAHEALRPLGITPENIHLVMNDTSKTPNSGPA 697
Query: 1022 XXXXXXDIYGAAVLDACEQIKARMEPIASKHNFNSFAELASACYVQRIDLSAHGFYITPE 1081
+ G A+ ACE + M F + AE+ + R D G + P
Sbjct: 698 GGSRSQVVTGNAIRVACEMLIEGMRKPGG--GFFTPAEMKAEGRPMRYD----GKWTAPA 751
Query: 1082 IDFDWITGKGNPFRYFTYGAAFAEVEIDTLTGDFHTRMANVILDLGYSLNPAIDVGQIEG 1141
D D G+G+PF + YG EV ++ TG + D+G N + GQI G
Sbjct: 752 KDCD-AKGQGSPFACYMYGLFLTEVAVEVATGKATVEKMVCVADIGKICNKLVVDGQIYG 810
Query: 1142 AFIQGLGWLALEELKWGDAAHKWIPPGCLYTCGPGSYKIPSLNDVPLKFNVSLLKGHPNV 1201
QG+G LAL E H + G IPS+ +P + ++ P
Sbjct: 811 GLAQGVG-LALSEDYEDLKKHSTM----------GGAGIPSIKMIPDDIEIVYVE-TPRK 858
Query: 1202 KAIHSSKAVGEPPFFLASSVFFAIKDAISAARADAGHTGWFPLDNPATPERI 1253
+ VGE P + I +A A H PA PE++
Sbjct: 859 DGPFGASGVGEMPLTAPHAAI--INGIYNACGARVRHL-------PARPEKV 901
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 53/99 (53%), Gaps = 9/99 (9%)
Query: 16 DLRYVLQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLAG--NLCRCTG 73
D + LQ + ++ +QCGFCTPGFI+S +LL P+ E + + N+CRCTG
Sbjct: 83 DCLHPLQHAWIQHGAAQCGFCTPGFIVSAKALL-DENVAPSREDVRDWFQKHHNICRCTG 141
Query: 74 YRPIVDAFRVFAKTNDALYTNMSSMSLKEGEFVCPSTGK 112
Y+P+VDA DA +++E F P+ G+
Sbjct: 142 YKPLVDAVM------DAAAILRGEKTVEEISFKMPADGR 174
>pdb|1RM6|A Chain A, Structure Of 4-Hydroxybenzoyl-Coa Reductase From Thauera
Aromatica
pdb|1RM6|D Chain D, Structure Of 4-Hydroxybenzoyl-Coa Reductase From Thauera
Aromatica
pdb|1SB3|A Chain A, Structure Of 4-Hydroxybenzoyl-Coa Reductase From Thauera
Aromatica
pdb|1SB3|D Chain D, Structure Of 4-Hydroxybenzoyl-Coa Reductase From Thauera
Aromatica
Length = 769
Score = 120 bits (302), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 169/727 (23%), Positives = 285/727 (39%), Gaps = 71/727 (9%)
Query: 505 EITKHGTSVGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSG 564
++ +HGT VG + +VTG+A+YT D P + L ++ S HARIL+ID S
Sbjct: 4 KLPQHGT-VGVRTPLVDGVEKVTGKAKYTADIAAP-DALVGRILRSPHAHARILAIDTSA 61
Query: 565 ARSSPGFVGIFFAEDVQGDNRIGPVVADEELFASEXXXXXXXXXXXXXAETHEEAKLASR 624
A + G + + + + P+ +E A + A A+ A
Sbjct: 62 AEALEGVIAVCTGAETPVPFGVLPIAENEYPLARDKVRYRGDPVAAVAAIDEVTAEKALA 121
Query: 625 KVQVEYEELPAILSIQEAIDAKSF-----HPNT---ERCFRKGDVDICFQSGQCDKIIEG 676
++V+YE LPA ++ + A+ A + PN E GDV F + D I E
Sbjct: 122 LIKVDYEVLPAYMTPKAAMKAGAIALHDDKPNNILREVHAEFGDVAAAF--AEADLIREK 179
Query: 677 EVRVGGQEHFYLEPHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTK 736
H ++E ++++ + + + ++TQ P V+ L + +++
Sbjct: 180 TYTFAEVNHVHMELNATLAEYDPVRDMLTLNTTTQVPYYVHLKVAACLQMDSARIRVIKP 239
Query: 737 RIGGGFGGKETRSAFIXXXXXVPSFLLNRP----VNLTLDRDIDMMISGQRHSFLGKYKV 792
+GGGFG + F + + LL R V L R+ + R K K+
Sbjct: 240 FLGGGFGARTEALHF-----EIIAGLLARKAKGTVRLLQTREETFIAHRGRPWTEVKMKI 294
Query: 793 GFTNEGKVLALDLEIYNNAGNSLDLSLAVL--ERAMFHSDNVYEIPNVRIMGNVCFTNFP 850
G +GK+ AL LE G + + A+ H +Y IP ++ +TN P
Sbjct: 295 GLKKDGKIAALALEATQAGGAYAGYGIITILYTGALMH--GLYHIPAIKHDAWRVYTNTP 352
Query: 851 SNTAFRGFGGPQGMLITENWIQRVAVEVRKSPEEIREINFQGE-GSILHYGQQLQHCTLF 909
A RG G E + + E+ +IR+IN + + Y Q++ +
Sbjct: 353 PCGAMRGHGTVDTRAAFEALLTEMGEELGIDSLKIRQINMLPQIPYVTMYAQRVMSYGVP 412
Query: 910 PLWNELKLSCDFLNARKEVDNFNLNNRWKKRGIAMVPTKF--GISFTLKLMNQAGALVHV 967
++K + + + ++ K RG+ + + F G S + A V++
Sbjct: 413 ECLEKVKAASGWEERKGKLP--------KGRGLGIALSHFVSGTSTPKHWTGEPHATVNL 464
Query: 968 YTD--GTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETSTDKVPNXXXXXXXX 1025
D G + + G ++GQG +T +QVAA + LS + V + P
Sbjct: 465 KLDFDGGITLLTGAADIGQGSNTMASQVAAEVLGVRLSRIRVISADSALTPKDNGSYSSR 524
Query: 1026 XXDIYGAAVLDACEQIK------------ARMEPI----------ASKHNFNSFAELASA 1063
+ G A + A E++K AR E I S+ SF E+ A
Sbjct: 525 VTFMVGNASISAAEELKGVLVKAAAKKLDAREEDIEVIDEMFMVSGSQDPGLSFQEVVKA 584
Query: 1064 CYVQRIDLSAHGFYITP-EIDFD-WITGKG-NPFRYFTYGAAFAEVEIDTLTGDFHTRMA 1120
V ++ G Y P E D I G F Y A E +D +TG
Sbjct: 585 AMVDSGTITVKGTYTCPTEFQGDKKIRGSAIGATMGFCYAAQVVEASVDEITGKVTAHKV 644
Query: 1121 NVILDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPGCLYTCGPGSYKI 1180
V +D+G +LNP GQ +G G+G EE + + G + Y++
Sbjct: 645 WVAVDVGKALNPLAVEGQTQGGVWMGMGQALSEETVYDN--------GRMVHGNILDYRV 696
Query: 1181 PSLNDVP 1187
P++ + P
Sbjct: 697 PTIVESP 703
>pdb|1T3Q|B Chain B, Crystal Structure Of Quinoline 2-Oxidoreductase From
Pseudomonas Putida 86
pdb|1T3Q|E Chain E, Crystal Structure Of Quinoline 2-Oxidoreductase From
Pseudomonas Putida 86
Length = 788
Score = 112 bits (281), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 184/740 (24%), Positives = 283/740 (38%), Gaps = 96/740 (12%)
Query: 512 SVGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPG- 570
S+G+ + +TG Y D + LH A + S HARI+SID + A++ PG
Sbjct: 13 SIGTSVLRREDTRLLTGRGRYIADLVLS-GMLHVASLRSPFAHARIVSIDVADAQALPGV 71
Query: 571 ---FVGIFFAEDVQGDNRIGPV----VADEELFASEXXXXXXXXXXXXXAETHEEAKLAS 623
+ G AE QG V + L A+ A + A+ A+
Sbjct: 72 ELVWCGADVAELSQGIVATMQVEGFQTTIQPLLANGVTRFVGEIVAVVVASSRAIAEDAA 131
Query: 624 RKVQVEYEELPAILSIQEAIDAKSFHPNT------ERCFRKGDVDICFQSGQCDKIIEGE 677
+ +QVEYEELPA+ I+ A++ ++ +T R R D ++ ++ G+
Sbjct: 132 QLIQVEYEELPAVTGIEAALEGEARANDTLAGNVVSRTSRARD-ELAPIFASSAGVVRGQ 190
Query: 678 VRVGGQEHFYLEPHSSVV---WTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCK 734
G +E +V WT ++ + ++TQ P + V+ +P + +
Sbjct: 191 FSCGRVSACPMETRGAVAQYEWTT---QQLILWTATQMPSFVRTMVAMFCAIPEHLIEVR 247
Query: 735 TKRIGGGFGGKETRSAFIXXXXXVPSFL---LNRPVNLTLDRDIDMMISGQRHSFLGKYK 791
+GGGFG K A + + L L RPV DR + + G H+ + +
Sbjct: 248 VPDVGGGFGQK----AHLHPEELLVCLLSRALGRPVRWIEDRQENFL--GATHAKQQRNE 301
Query: 792 VG--FTNEGKVLALDLEIYNNAGNSLDLSLAVLERAMFHSDN-----VYEIPNVRIMGNV 844
+G F +G+ LAL+ + G +L L + H N VY++P V
Sbjct: 302 MGLAFDGDGRFLALENRSITDGGAYNNLPWTQLVES--HVGNAVILGVYKVPAVSEESIA 359
Query: 845 CFTNFPSNTAFRGFGGPQGMLITENWIQRVAVEVRKSPEEIREINFQGEGSIL---HYGQ 901
TN A+RG G G + E I R A ++ SP EIR N GQ
Sbjct: 360 VATNKCPIGAYRGVGFTAGQIARETLIDRAARQLGLSPFEIRRRNVVMPEDFPFTNRLGQ 419
Query: 902 QLQHCTLFPLWNELKLSCDFLNARKEVDNFNLNNRWKKRGIAMVPTKFGI-SFTLKLM-- 958
+ T N L+ + R+ ++ G+++ G + TL +
Sbjct: 420 THREGTYLQTINLLEEMVNPEAFRQRQAEARARGKYLGLGVSVFNEVTGTGTRTLSFLGT 479
Query: 959 ---NQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETSTDKV 1015
A V + G V VT GQG T +AQ+AA +P S V + ST
Sbjct: 480 PTTTHDSATVRIDPTGKVTVTTSLASSGQGHETTLAQIAADVLGVPASDVVIQAGSTKNT 539
Query: 1016 PNXXXXXXXXXXDIYGAAVLDACEQIKARMEPIASKHNFNS------------------- 1056
I ++ A ++ R++ +A H +
Sbjct: 540 YGFGAYASRGAV-IGAGSIGRAASIVRERVKQLAG-HLLEAASEDIVIEDGLVHVAGVPA 597
Query: 1057 ----FAELASACYVQRIDLSAH--GFYITPEIDFDWITGKGNPFRY-FTYGAAFAEVEID 1109
FAE+ A Y + H GF T E T +P G A VEID
Sbjct: 598 KGMPFAEVVGAAYFAD---ATHPPGFDATLE-----ATATYDPSDLVLANGGHAAIVEID 649
Query: 1110 TLTGDFHTRMAN--VILDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPP 1167
T + TR+ + + D G +NP I GQI G Q +G LEE+ + D
Sbjct: 650 AST--YATRVTDFFAVEDCGTMINPMIVEGQIRGGIAQAIGQTLLEEVIYDDF------- 700
Query: 1168 GCLYTCGPGSYKIPSLNDVP 1187
G L T Y IP+ DVP
Sbjct: 701 GQLVTTTLMDYLIPTTLDVP 720
>pdb|1N5W|B Chain B, Crystal Structure Of The Cu,Mo-Co Dehydrogenase (Codh);
Oxidized Form
pdb|1N5W|E Chain E, Crystal Structure Of The Cu,Mo-Co Dehydrogenase (Codh);
Oxidized Form
pdb|1N60|B Chain B, Crystal Structure Of The Cu,Mo-Co Dehydrogenase (Codh);
Cyanide- Inactivated Form
pdb|1N60|E Chain E, Crystal Structure Of The Cu,Mo-Co Dehydrogenase (Codh);
Cyanide- Inactivated Form
pdb|1N61|B Chain B, Crystal Structure Of The Cu,Mo-Co Dehydrogenase (Codh);
Dithionite Reduced State
pdb|1N61|E Chain E, Crystal Structure Of The Cu,Mo-Co Dehydrogenase (Codh);
Dithionite Reduced State
pdb|1N62|B Chain B, Crystal Structure Of The Mo,cu-co Dehydrogenase (codh), N-
Butylisocyanide-bound State
pdb|1N62|E Chain E, Crystal Structure Of The Mo,cu-co Dehydrogenase (codh), N-
Butylisocyanide-bound State
pdb|1N63|B Chain B, Crystal Structure Of The Cu,Mo-Co Dehydrogenase (Codh);
Carbon Monoxide Reduced State
pdb|1N63|E Chain E, Crystal Structure Of The Cu,Mo-Co Dehydrogenase (Codh);
Carbon Monoxide Reduced State
Length = 809
Score = 106 bits (264), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 186/802 (23%), Positives = 291/802 (36%), Gaps = 129/802 (16%)
Query: 528 GEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGFVGIFFAEDVQGDN-RI 586
G+ Y DD +P L V S HARI SID S A++ PG + A D++ N
Sbjct: 36 GKGNYVDDVKLP-GMLFGDFVRSSHAHARIKSIDTSKAKALPGVFAVLTAADLKPLNLHY 94
Query: 587 GPVVAD--EELFASEXXXXXXXXXXXXXAETHEEAKLASRKVQVEYEELPAILSIQEAID 644
P +A + + A E A+ A A V+V+YE LP ++ +A++
Sbjct: 95 MPTLAGDVQAVLADEKVLFQNQEVAFVVAKDRYVAADAIELVEVDYEPLPVLVDPFKAME 154
Query: 645 ----------------AKSFHPNTERCFRKGDVDICFQSGQCDKIIEGEVRVGGQEHFYL 688
A + FR +I + G + EV V Y
Sbjct: 155 PDAPLLREDIKDKMTGAHGARKHHNHIFR---WEIGDKEGTDATFAKAEV-VSKDMFTYH 210
Query: 689 EPHSS------VVWTMDH-GNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGG 741
H S V +MD E+ + + QAP + VS + GLP K+ IGGG
Sbjct: 211 RVHPSPLETCQCVASMDKIKGELTLWGTFQAPHVIRTVVSLISGLPEHKIHVIAPDIGGG 270
Query: 742 FGGK-ETRSAFIXXXXXVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKV 800
FG K S ++ V S +L PV DR ++ + + ++ T +GK+
Sbjct: 271 FGNKVGAYSGYVCAV--VASIVLGVPVKWVEDRMENLSTTSFARDYHMTTELAATKDGKI 328
Query: 801 LALDLEIYNNAGNSLDLSLAVLERAMFHS--DNVYEIPNVRIMGNVCFTNFPSN-TAFR- 856
LA+ + + G + A F + Y++P + + +TN S A+R
Sbjct: 329 LAMRCHVLADHGAFDACADPSKWPAGFMNICTGSYDMPVAHLAVDGVYTNKASGGVAYRC 388
Query: 857 GFGGPQGMLITENWIQRVAVEVRKSPEEIREINFQGEGSILHYGQQLQHCTLFPLWNELK 916
F + + E I+ +A + ++R NF Q Q + PL E
Sbjct: 389 SFRVTEAVYAIERAIETLAQRLEMDSADLRIKNFI---------QPEQFPYMAPLGWEYD 439
Query: 917 LSCDFLNARKEVDNFNLNNRWK---------KRGIAMVPTKFGISFTLKLMNQA------ 961
L +K +D + KRG GISF +++
Sbjct: 440 SGNYPLAMKKAMDTVGYHQLRAEQKAKQEAFKRGETREIMGIGISFFTEIVGAGPSKNCD 499
Query: 962 --------GALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETSTD 1013
A + ++ G+V+ G GQG T AQ+ A+ IP + + E +TD
Sbjct: 500 ILGVSMFDSAEIRIHPTGSVIARMGTKSQGQGHETTYAQIIATELGIPADDIMIEEGNTD 559
Query: 1014 KVPNXXXXXXXXXXDIYGAAVLDACEQIKARMEPIASK---------------------- 1051
P GAA A +IKA+ + IA+
Sbjct: 560 TAPYGLGTYGSRSTPTAGAATAVAARKIKAKAQMIAAHMLEVHEGDLEWDVDRFRVKGLP 619
Query: 1052 HNFNSFAELASACYVQ-----RIDLSAHGFYITPEIDFDWITGKGNPFRYFTYGAAFAEV 1106
F + ELA A Y L A +Y P + + PF GA F +
Sbjct: 620 EKFKTMKELAWASYNSPPPNLEPGLEAVNYYDPPNMTY--------PF-----GAYFCIM 666
Query: 1107 EIDTLTGDFHTRMANVILDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIP 1166
+ID TG TR + D G +NP I GQ+ G + +E+++ +
Sbjct: 667 DIDVDTGVAKTRRFYALDDCGTRINPMIIEGQVHGGLTEAFAVAMGQEIRYDEQ------ 720
Query: 1167 PGCLYTCGPGSYKIPSLNDVP---LKFNVSLLKGHPNVKAIHSSKAVGEPPFFLASSVFF 1223
G + + +P+ + P + V+ HP +K VGE P F
Sbjct: 721 -GNVLGASFMDFFLPTAVETPKWETDYTVTPSPHHPI-----GAKGVGESPHVGGVPCFS 774
Query: 1224 -AIKDA---ISAARADAGHTGW 1241
A+ DA ++A H W
Sbjct: 775 NAVNDAYAFLNAGHIQMPHDAW 796
>pdb|1ZXI|B Chain B, Reconstituted Co Dehydrogenase From Oligotropha
Carboxidovorans
pdb|1ZXI|E Chain E, Reconstituted Co Dehydrogenase From Oligotropha
Carboxidovorans
Length = 809
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 186/802 (23%), Positives = 291/802 (36%), Gaps = 129/802 (16%)
Query: 528 GEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGFVGIFFAEDVQGDN-RI 586
G+ Y DD +P L V S HARI SID S A++ PG + A D++ N
Sbjct: 36 GKGNYVDDVKLP-GMLFGDFVRSSHAHARIKSIDTSKAKALPGVFAVLTAADLKPLNLHY 94
Query: 587 GPVVAD--EELFASEXXXXXXXXXXXXXAETHEEAKLASRKVQVEYEELPAILSIQEAID 644
P +A + + A E A+ A A V+V+YE LP ++ +A++
Sbjct: 95 MPTLAGDVQAVLADEKVLFQNQEVAFVVAKDRYVAADAIELVEVDYEPLPVLVDPFKAME 154
Query: 645 ----------------AKSFHPNTERCFRKGDVDICFQSGQCDKIIEGEVRVGGQEHFYL 688
A + FR +I + G + EV V Y
Sbjct: 155 PDAPLLREDIKDKMTGAHGARKHHNHIFR---WEIGDKEGTDATFAKAEV-VSKDMFTYH 210
Query: 689 EPHSS------VVWTMDH-GNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGG 741
H S V +MD E+ + + QAP + VS + GLP K+ IGGG
Sbjct: 211 RVHPSPLETCQCVASMDKIKGELTLWGTFQAPHVIRTVVSLISGLPEHKIHVIAPDIGGG 270
Query: 742 FGGK-ETRSAFIXXXXXVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKV 800
FG K S ++ V S +L PV DR ++ + + ++ T +GK+
Sbjct: 271 FGNKVGAYSGYVCAV--VASIVLGVPVKWVEDRMENLSTTSFARDYHMTTELAATKDGKI 328
Query: 801 LALDLEIYNNAGNSLDLSLAVLERAMFHS--DNVYEIPNVRIMGNVCFTNFPSN-TAFR- 856
LA+ + + G + A F + Y++P + + +TN S A+R
Sbjct: 329 LAMRCHVLADHGAFDACADPSKWPAGFMNICTGSYDMPVAHLAVDGVYTNKASGGVAYRC 388
Query: 857 GFGGPQGMLITENWIQRVAVEVRKSPEEIREINFQGEGSILHYGQQLQHCTLFPLWNELK 916
F + + E I+ +A + ++R NF Q Q + PL E
Sbjct: 389 SFRVTEAVYAIERAIETLAQRLEMDSADLRIKNFI---------QPEQFPYMAPLGWEYD 439
Query: 917 LSCDFLNARKEVDNFNLNNRWK---------KRGIAMVPTKFGISFTLKLMNQA------ 961
L +K +D + KRG GISF +++
Sbjct: 440 SGNYPLAMKKAMDTVGYHQLRAEQKAKQEAFKRGETREIMGIGISFFTEIVGAGPSKNCD 499
Query: 962 --------GALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETSTD 1013
A + ++ G+V+ G GQG T AQ+ A+ IP + + E +TD
Sbjct: 500 ILGVSMFDSAEIRIHPTGSVIARMGTKSQGQGHETTYAQIIATELGIPADDIMIEEGNTD 559
Query: 1014 KVPNXXXXXXXXXXDIYGAAVLDACEQIKARMEPIASK---------------------- 1051
P GAA A +IKA+ + IA+
Sbjct: 560 TAPYGLGTYGSRSTPTAGAATAVAARKIKAKAQMIAAHMLEVHEGDLEWDVDRFRVKGLP 619
Query: 1052 HNFNSFAELASACYVQ-----RIDLSAHGFYITPEIDFDWITGKGNPFRYFTYGAAFAEV 1106
F + ELA A Y L A +Y P + + PF GA F +
Sbjct: 620 EKFKTMKELAWASYNSPPPNLEPGLEAVNYYDPPNMTY--------PF-----GAYFCIM 666
Query: 1107 EIDTLTGDFHTRMANVILDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIP 1166
+ID TG TR + D G +NP I GQ+ G + +E+++ +
Sbjct: 667 DIDIDTGVAKTRRFYALDDCGTRINPMIIEGQVHGGLTEAFAVAMGQEIRYDEQ------ 720
Query: 1167 PGCLYTCGPGSYKIPSLNDVP---LKFNVSLLKGHPNVKAIHSSKAVGEPPFFLASSVFF 1223
G + + +P+ + P + V+ HP +K VGE P F
Sbjct: 721 -GNVLGASFMDFFLPTAVETPKWETDYTVTPSPHHPI-----GAKGVGESPHVGGVPCFS 774
Query: 1224 -AIKDA---ISAARADAGHTGW 1241
A+ DA ++A H W
Sbjct: 775 NAVNDAYAFLNAGHIQMPHDAW 796
>pdb|3EUB|A Chain A, Crystal Structure Of Desulfo-Xanthine Oxidase With
Xanthine
pdb|3EUB|J Chain J, Crystal Structure Of Desulfo-Xanthine Oxidase With
Xanthine
pdb|3EUB|S Chain S, Crystal Structure Of Desulfo-Xanthine Oxidase With
Xanthine
pdb|3EUB|2 Chain 2, Crystal Structure Of Desulfo-Xanthine Oxidase With
Xanthine
Length = 165
Score = 103 bits (256), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 44/66 (66%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 21 LQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLAGNLCRCTGYRPIVDA 80
+QE + +SHGSQCGFCTPG +MSMY+LLR +Q PT E+IE++ GNLCRCTGYRPI+
Sbjct: 101 VQERIAKSHGSQCGFCTPGIVMSMYTLLR-NQPEPTVEEIEDAFQGNLCRCTGYRPILQG 159
Query: 81 FRVFAK 86
FR FAK
Sbjct: 160 FRTFAK 165
>pdb|3ETR|A Chain A, Crystal Structure Of Xanthine Oxidase In Complex With
Lumazine
pdb|3ETR|L Chain L, Crystal Structure Of Xanthine Oxidase In Complex With
Lumazine
pdb|3NRZ|A Chain A, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With Hypoxanthine
pdb|3NRZ|J Chain J, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With Hypoxanthine
pdb|3NS1|A Chain A, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With 6- Mercaptopurine
pdb|3NS1|J Chain J, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With 6- Mercaptopurine
pdb|3NVV|A Chain A, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With Arsenite
pdb|3NVV|J Chain J, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With Arsenite
pdb|3NVW|A Chain A, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With Guanine
pdb|3NVW|J Chain J, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With Guanine
pdb|3NVY|A Chain A, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With Quercetin
pdb|3NVY|J Chain J, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With Quercetin
pdb|3NVZ|A Chain A, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With Indole-3- Aldehyde
pdb|3NVZ|J Chain J, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With Indole-3- Aldehyde
pdb|3SR6|A Chain A, Crystal Structure Of Reduced Bovine Xanthine Oxidase In
Complex With Arsenite
pdb|3SR6|J Chain J, Crystal Structure Of Reduced Bovine Xanthine Oxidase In
Complex With Arsenite
Length = 164
Score = 103 bits (256), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 44/66 (66%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 21 LQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLAGNLCRCTGYRPIVDA 80
+QE + +SHGSQCGFCTPG +MSMY+LLR +Q PT E+IE++ GNLCRCTGYRPI+
Sbjct: 100 VQERIAKSHGSQCGFCTPGIVMSMYTLLR-NQPEPTVEEIEDAFQGNLCRCTGYRPILQG 158
Query: 81 FRVFAK 86
FR FAK
Sbjct: 159 FRTFAK 164
>pdb|1FIQ|A Chain A, Crystal Structure Of Xanthine Oxidase From Bovine Milk
pdb|3B9J|A Chain A, Structure Of Xanthine Oxidase With
2-Hydroxy-6-Methylpurine
pdb|3B9J|I Chain I, Structure Of Xanthine Oxidase With
2-Hydroxy-6-Methylpurine
Length = 219
Score = 102 bits (255), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 44/66 (66%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 21 LQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLAGNLCRCTGYRPIVDA 80
+QE + +SHGSQCGFCTPG +MSMY+LLR +Q PT E+IE++ GNLCRCTGYRPI+
Sbjct: 101 VQERIAKSHGSQCGFCTPGIVMSMYTLLR-NQPEPTVEEIEDAFQGNLCRCTGYRPILQG 159
Query: 81 FRVFAK 86
FR FAK
Sbjct: 160 FRTFAK 165
>pdb|1FFU|B Chain B, Carbon Monoxide Dehydrogenase From Hydrogenophaga
Pseudoflava Which Lacks The Mo-Pyranopterin Moiety Of The
Molybdenum Cofactor
pdb|1FFU|E Chain E, Carbon Monoxide Dehydrogenase From Hydrogenophaga
Pseudoflava Which Lacks The Mo-Pyranopterin Moiety Of The
Molybdenum Cofactor
pdb|1FFV|B Chain B, Carbon Monoxide Dehydrogenase From Hydrogenophaga
Pseudoflava
pdb|1FFV|E Chain E, Carbon Monoxide Dehydrogenase From Hydrogenophaga
Pseudoflava
Length = 803
Score = 102 bits (253), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 197/832 (23%), Positives = 303/832 (36%), Gaps = 158/832 (18%)
Query: 521 SSRLQ------VTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGFVGI 574
+SRL+ + G+ Y DD MP LH +V + H RI I A + PG +
Sbjct: 20 ASRLRKEDARFIQGKGNYVDDIKMP-GMLHMDIVRAPIAHGRIKKIHKDAALAMPGVHAV 78
Query: 575 FFAEDVQ-----------GDNRIGPVVADEELFASEXXXXXXXXXXXXXAETHEEAKLAS 623
AED++ GD + V+ADE++ A+ A A
Sbjct: 79 LTAEDLKPLKLHWMPTLAGD--VAAVLADEKVH------FQMQEVAIVIADDRYIAADAV 130
Query: 624 RKVQVEYEELPAILS-----------IQEAIDAKSFHPNTERCFRKGDVDICFQSGQCDK 672
V+VEY+ELP ++ ++E + K+ + R + F G DK
Sbjct: 131 EAVKVEYDELPVVIDPIDALKPDAPVLREDLAGKTSGAHGPREHH----NHIFTWGAGDK 186
Query: 673 IIEGEVRVGG-----QEHFYLEPHS------SVVWTMD--HGNEVHMISSTQAPQKHQKY 719
V Q +Y H V + D G+ I+S QAP +
Sbjct: 187 AATDAVFANAPVTVSQHMYYPRVHPCPLETCGCVASFDPIKGDLTTYITS-QAPHVVRTV 245
Query: 720 VSHVLGLPMSKVVCKTKRIGGGFGGK-ETRSAFIXXXXXVPSFLLNRPVNLTLDRDIDMM 778
VS + G+P SKV + IGGGFG K ++ V S +L RPV DR ++
Sbjct: 246 VSMLSGIPESKVRIVSPDIGGGFGNKVGIYPGYVCAI--VASIVLGRPVKWVEDRVENIS 303
Query: 779 ISGQRHSFLGKYKVGFTNEGKVLALDLEIYNNAGNSLDLSL--AVLERAMFH-SDNVYEI 835
+ + ++ T +GK+L L + + + G + D +FH Y+I
Sbjct: 304 TTAFARDYHMDGELAATPDGKILGLRVNVVADHG-AFDACADPTKFPAGLFHICSGSYDI 362
Query: 836 PNVRIMGNVCFTN-FPSNTAFR-GFGGPQGMLITENWIQRVAVEVRKSPEEIREINFQGE 893
P +TN P A+ F + + + E + +A ++ EIR NF +
Sbjct: 363 PRAHCSVKGVYTNKAPGGVAYXXSFRVTEAVYLIERMVDVLAQKLNMDKAEIRAKNFIRK 422
Query: 894 GSILHYGQQLQHCTLFPLWNELKLSCDFLNARKEV-DNFNL----NNRWKKRGIAMVPTK 948
+Q + T F + S D+ A K+V D + + +R PT
Sbjct: 423 -------EQFPYTTQFGFEYD---SGDYHTALKKVLDAVDYPALRAEQAARRADPNSPTL 472
Query: 949 FGISFTL----------KLMNQAGA------LVHVYTDGTVLVTHGGVEMGQGLHTKVAQ 992
GI K+ + G + ++ G+ + G + GQG T AQ
Sbjct: 473 MGIGLVTFTEVVGAGPSKMCDILGVGMFDSCEIRIHPTGSAIARMGTITQGQGHQTTYAQ 532
Query: 993 VAASAFNIPLSSVFVSETSTDKVPNXXXXXXXXXXDIYGAAVLDACEQIKARMEPIAS-- 1050
+ A+ IP + V E T P + GAA+ A +I A+ IA+
Sbjct: 533 IIATELGIPSEVIQVEEGDTSTAPYGLGTYGSRSTPVAGAAIALAARKIHAKARKIAAHM 592
Query: 1051 --------------------KHNFNSFAELASACYVQ-----RIDLSAHGFYITPEIDFD 1085
F + A++A Y Q L A +Y P +
Sbjct: 593 LEVNENDLDWEVDRFKVKGDDSKFKTMADIAWQAYHQPPAGLEPGLEAVHYYDPPNFTY- 651
Query: 1086 WITGKGNPFRYFTYGAAFAEVEIDTLTGDFHTRMANVILDLGYSLNPAIDVGQIEGAFIQ 1145
PF G V+ID TG+ R + D G +NP I GQI G +
Sbjct: 652 -------PF-----GIYLCVVDIDRATGETKVRRFYALDDCGTRINPMIIEGQIHGGLTE 699
Query: 1146 GLGWLALEELKWGDAAHKWIPPGCLYTCGPGSYKIPSLNDVP---LKFNVSLLKGHP-NV 1201
G +++ + DA G L Y +P+ + P V+ HP
Sbjct: 700 GYAVAMGQQMPF-DAQ------GNLLGNTLMDYFLPTAVETPHWETDHTVTPSPHHPIGA 752
Query: 1202 KAIHSSKAVGEPPFFLASSVFFAIKDAISAARADAGHTGWFPLDNPATPERI 1253
K + S VG P F A A+ DA + H G LD P T R+
Sbjct: 753 KGVAESPHVGSIPTFTA-----AVVDAFA-------HVGVTHLDMPHTSYRV 792
>pdb|1JRO|A Chain A, Crystal Structure Of Xanthine Dehydrogenase From
Rhodobacter Capsulatus
pdb|1JRO|C Chain C, Crystal Structure Of Xanthine Dehydrogenase From
Rhodobacter Capsulatus
pdb|1JRO|E Chain E, Crystal Structure Of Xanthine Dehydrogenase From
Rhodobacter Capsulatus
pdb|1JRO|G Chain G, Crystal Structure Of Xanthine Dehydrogenase From
Rhodobacter Capsulatus
pdb|1JRP|A Chain A, Crystal Structure Of Xanthine Dehydrogenase Inhibited By
Alloxanthine From Rhodobacter Capsulatus
pdb|1JRP|C Chain C, Crystal Structure Of Xanthine Dehydrogenase Inhibited By
Alloxanthine From Rhodobacter Capsulatus
pdb|1JRP|E Chain E, Crystal Structure Of Xanthine Dehydrogenase Inhibited By
Alloxanthine From Rhodobacter Capsulatus
pdb|1JRP|G Chain G, Crystal Structure Of Xanthine Dehydrogenase Inhibited By
Alloxanthine From Rhodobacter Capsulatus
Length = 462
Score = 92.0 bits (227), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 118/245 (48%), Gaps = 20/245 (8%)
Query: 195 YPDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELLKM 254
+P++ L+ G T+V + + + ++H +L + DG IGA V + L
Sbjct: 196 HPEATLIAGGTDVSLWVTKALRDLPEVAFLSHCKDLAQIRETPDGYGIGAGVTIAAL--- 252
Query: 255 FRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPLWMASGAK 314
+ E P H A ++ FA Q++ VA++GGNI SPI D P +A GA
Sbjct: 253 --RAFAEGP-H-----PALAGLLRRFASEQVRQVATIGGNIANGSPIGDGPPALIAMGAS 304
Query: 315 FHIVDCKGNIRTTMA-EEFFLGYRKVDLTSGEILLSIFLPWTRPFEFVKEFKQAHRRDDD 373
+ +G R M E+FFL YRK D GE + S+ LP + P ++ +K + R D D
Sbjct: 305 LTLR--RGQERRRMPLEDFFLEYRKQDRRPGEFVESVTLPKSAP--GLRCYKLSKRFDQD 360
Query: 374 IALVNAGMRVYLEEKDEEWVVSDALLVYGGVAPLSLSAKKTKTFIVGKSWSQELLQNALK 433
I+ V + + L+ + A + +GG+A + A + ++G+ + ++ + AL
Sbjct: 361 ISAVCGCLNLTLKGSK----IETARIAFGGMAGVPKRAAAFEAALIGQDFREDTIAAALP 416
Query: 434 ILQTD 438
+L D
Sbjct: 417 LLAQD 421
Score = 67.0 bits (162), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 41/58 (70%), Gaps = 5/58 (8%)
Query: 21 LQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLAGNLCRCTGYRPIV 78
+Q++++ HGSQCGFCTPGFI+SM ++ + ++ LAGNLCRCTGY PI+
Sbjct: 91 VQQAMIDHHGSQCGFCTPGFIVSM-----AAAHDRDRKDYDDLLAGNLCRCTGYAPIL 143
>pdb|2W3R|A Chain A, Crystal Structure Of Xanthine Dehydrogenase (Desulfo Form)
From Rhodobacter Capsulatus In Complex With Hypoxanthine
pdb|2W3R|C Chain C, Crystal Structure Of Xanthine Dehydrogenase (Desulfo Form)
From Rhodobacter Capsulatus In Complex With Hypoxanthine
pdb|2W3R|E Chain E, Crystal Structure Of Xanthine Dehydrogenase (Desulfo Form)
From Rhodobacter Capsulatus In Complex With Hypoxanthine
pdb|2W3R|G Chain G, Crystal Structure Of Xanthine Dehydrogenase (Desulfo Form)
From Rhodobacter Capsulatus In Complex With Hypoxanthine
pdb|2W3S|A Chain A, Crystal Structure Of Xanthine Dehydrogenase (Desulfo Form)
From Rhodobacter Capsulatus In Complex With Xanthine
pdb|2W3S|C Chain C, Crystal Structure Of Xanthine Dehydrogenase (Desulfo Form)
From Rhodobacter Capsulatus In Complex With Xanthine
pdb|2W3S|E Chain E, Crystal Structure Of Xanthine Dehydrogenase (Desulfo Form)
From Rhodobacter Capsulatus In Complex With Xanthine
pdb|2W3S|G Chain G, Crystal Structure Of Xanthine Dehydrogenase (Desulfo Form)
From Rhodobacter Capsulatus In Complex With Xanthine
pdb|2W54|A Chain A, Crystal Structure Of Xanthine Dehydrogenase From
Rhodobacter Capsulatus In Complex With Bound Inhibitor
Pterin-6-Aldehyde
pdb|2W54|C Chain C, Crystal Structure Of Xanthine Dehydrogenase From
Rhodobacter Capsulatus In Complex With Bound Inhibitor
Pterin-6-Aldehyde
pdb|2W54|E Chain E, Crystal Structure Of Xanthine Dehydrogenase From
Rhodobacter Capsulatus In Complex With Bound Inhibitor
Pterin-6-Aldehyde
pdb|2W54|G Chain G, Crystal Structure Of Xanthine Dehydrogenase From
Rhodobacter Capsulatus In Complex With Bound Inhibitor
Pterin-6-Aldehyde
pdb|2W55|A Chain A, Crystal Structure Of Xanthine Dehydrogenase (E232q
Variant) From Rhodobacter Capsulatus In Complex With
Hypoxanthine
pdb|2W55|C Chain C, Crystal Structure Of Xanthine Dehydrogenase (E232q
Variant) From Rhodobacter Capsulatus In Complex With
Hypoxanthine
pdb|2W55|E Chain E, Crystal Structure Of Xanthine Dehydrogenase (E232q
Variant) From Rhodobacter Capsulatus In Complex With
Hypoxanthine
pdb|2W55|G Chain G, Crystal Structure Of Xanthine Dehydrogenase (E232q
Variant) From Rhodobacter Capsulatus In Complex With
Hypoxanthine
Length = 462
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 118/245 (48%), Gaps = 20/245 (8%)
Query: 195 YPDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELLKM 254
+P++ L+ G T+V + + + ++H +L + DG IGA V + L
Sbjct: 196 HPEATLIAGGTDVSLWVTKALRDLPEVAFLSHCKDLAQIRETPDGYGIGAGVTIAAL--- 252
Query: 255 FRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPLWMASGAK 314
+ E P H A ++ FA Q++ VA++GGNI SPI D P +A GA
Sbjct: 253 --RAFAEGP-H-----PALAGLLRRFASEQVRQVATIGGNIANGSPIGDGPPALIAMGAS 304
Query: 315 FHIVDCKGNIRTTMA-EEFFLGYRKVDLTSGEILLSIFLPWTRPFEFVKEFKQAHRRDDD 373
+ +G R M E+FFL YRK D GE + S+ LP + P ++ +K + R D D
Sbjct: 305 LTLR--RGQERRRMPLEDFFLEYRKQDRRPGEFVESVTLPKSAP--GLRCYKLSKRFDQD 360
Query: 374 IALVNAGMRVYLEEKDEEWVVSDALLVYGGVAPLSLSAKKTKTFIVGKSWSQELLQNALK 433
I+ V + + L+ + A + +GG+A + A + ++G+ + ++ + AL
Sbjct: 361 ISAVCGCLNLTLKGSK----IETARIAFGGMAGVPKRAAAFEAALIGQDFREDTIAAALP 416
Query: 434 ILQTD 438
+L D
Sbjct: 417 LLAQD 421
Score = 67.0 bits (162), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 41/58 (70%), Gaps = 5/58 (8%)
Query: 21 LQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLAGNLCRCTGYRPIV 78
+Q++++ HGSQCGFCTPGFI+SM ++ + ++ LAGNLCRCTGY PI+
Sbjct: 91 VQQAMIDHHGSQCGFCTPGFIVSM-----AAAHDRDRKDYDDLLAGNLCRCTGYAPIL 143
>pdb|3HRD|B Chain B, Crystal Structure Of Nicotinate Dehydrogenase
pdb|3HRD|F Chain F, Crystal Structure Of Nicotinate Dehydrogenase
Length = 330
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 134/332 (40%), Gaps = 37/332 (11%)
Query: 938 KKRGIAMVPTKFGISFTLKLMNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAASA 997
KKRG + +GI T L N A A V ++ DG+ V G ++GQG T +AQ+AA
Sbjct: 2 KKRGKGVGSMWYGIGNT-GLPNPAAAFVEIHGDGSANVMFGAADIGQGSGTAMAQIAAEE 60
Query: 998 FNIPLSSVFVSETSTDKVPNXXXXXXXXXXDIYGAAVLDACEQIKARMEPIASKH----- 1052
+ + V+ T P+ I G AV+ AC Q K + A++
Sbjct: 61 LGLDYEKIHVTWGDTMVTPDGGATSASRQTLITGNAVILACRQAKETLAKTAAEKLDCAP 120
Query: 1053 ---NFN--------------SFAELASACYVQRIDLSAHGFYITPEIDFDWITGKGNPFR 1095
+F ++ EL +A G Y G PF
Sbjct: 121 EELSFRDNTVFITADPERSMTYGELMAAMKAAGRMAVGAGSYNPNTTGLAPENMSGIPFE 180
Query: 1096 YFTYGAAFAEVEIDTLTGDFHTRMANVILDLGYSLNPAIDVGQIEGAFIQGLGWLALEEL 1155
++Y AEVE+DT TG+ D+G +N ++ GQIEG G G++ +EE+
Sbjct: 181 VYSYATTIAEVEVDTETGEVDVLKVVSAHDVGTPINRSMVEGQIEGGVTMGQGFVLMEEI 240
Query: 1156 KWGDAAHKWIPPGCLYTCGPGSYKIPSLNDVPLKFNVSL-LKGHPNVKAIHSSKAVGEPP 1214
+ G + Y IPS DVP ++ + +G P +K VGEP
Sbjct: 241 EVNTKN------GAIKNPSMSKYIIPSNRDVPEIHSILVESEGGPGP---FGAKGVGEPA 291
Query: 1215 FF-LASSVFFAIKDAISAARADAGHTGWFPLD 1245
+ +V AI+DA+ HT P D
Sbjct: 292 LIPMIPAVVAAIEDALGTRFT---HTPIMPKD 320
>pdb|1FFU|A Chain A, Carbon Monoxide Dehydrogenase From Hydrogenophaga
Pseudoflava Which Lacks The Mo-Pyranopterin Moiety Of
The Molybdenum Cofactor
pdb|1FFU|D Chain D, Carbon Monoxide Dehydrogenase From Hydrogenophaga
Pseudoflava Which Lacks The Mo-Pyranopterin Moiety Of
The Molybdenum Cofactor
pdb|1FFV|A Chain A, Carbon Monoxide Dehydrogenase From Hydrogenophaga
Pseudoflava
pdb|1FFV|D Chain D, Carbon Monoxide Dehydrogenase From Hydrogenophaga
Pseudoflava
Length = 163
Score = 73.9 bits (180), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 52/88 (59%), Gaps = 6/88 (6%)
Query: 4 IQFNANKLLTSLDLR-----YVLQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEE 58
+Q + +++LT L + +QE + HG QCGFCTPG +M Y L+ + PTE
Sbjct: 67 VQCDGSEVLTVEGLANKGVLHAVQEGFYKEHGLQCGFCTPGMLMRAYRFLQENPN-PTEA 125
Query: 59 QIEESLAGNLCRCTGYRPIVDAFRVFAK 86
+I + GNLCRCTGY+ IV A + A+
Sbjct: 126 EIRMGMTGNLCRCTGYQNIVKAVQYAAR 153
>pdb|1N5W|A Chain A, Crystal Structure Of The Cu,Mo-Co Dehydrogenase (Codh);
Oxidized Form
pdb|1N5W|D Chain D, Crystal Structure Of The Cu,Mo-Co Dehydrogenase (Codh);
Oxidized Form
pdb|1N60|A Chain A, Crystal Structure Of The Cu,Mo-Co Dehydrogenase (Codh);
Cyanide- Inactivated Form
pdb|1N60|D Chain D, Crystal Structure Of The Cu,Mo-Co Dehydrogenase (Codh);
Cyanide- Inactivated Form
pdb|1N61|A Chain A, Crystal Structure Of The Cu,Mo-Co Dehydrogenase (Codh);
Dithionite Reduced State
pdb|1N61|D Chain D, Crystal Structure Of The Cu,Mo-Co Dehydrogenase (Codh);
Dithionite Reduced State
pdb|1N62|A Chain A, Crystal Structure Of The Mo,cu-co Dehydrogenase (codh), N-
Butylisocyanide-bound State
pdb|1N62|D Chain D, Crystal Structure Of The Mo,cu-co Dehydrogenase (codh), N-
Butylisocyanide-bound State
pdb|1N63|A Chain A, Crystal Structure Of The Cu,Mo-Co Dehydrogenase (Codh);
Carbon Monoxide Reduced State
pdb|1N63|D Chain D, Crystal Structure Of The Cu,Mo-Co Dehydrogenase (Codh);
Carbon Monoxide Reduced State
pdb|1ZXI|A Chain A, Reconstituted Co Dehydrogenase From Oligotropha
Carboxidovorans
pdb|1ZXI|D Chain D, Reconstituted Co Dehydrogenase From Oligotropha
Carboxidovorans
Length = 166
Score = 71.2 bits (173), Expect = 3e-12, Method: Composition-based stats.
Identities = 33/65 (50%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 21 LQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLAGNLCRCTGYRPIVDA 80
LQE HG QCG+CTPG IM + LL+ + + PTE +I + GNLCRCTGY+ IV A
Sbjct: 90 LQEGFRMMHGLQCGYCTPGMIMRSHRLLQENPS-PTEAEIRFGIGGNLCRCTGYQNIVKA 148
Query: 81 FRVFA 85
+ A
Sbjct: 149 IQYAA 153
>pdb|1RM6|C Chain C, Structure Of 4-Hydroxybenzoyl-Coa Reductase From Thauera
Aromatica
pdb|1RM6|F Chain F, Structure Of 4-Hydroxybenzoyl-Coa Reductase From Thauera
Aromatica
pdb|1SB3|C Chain C, Structure Of 4-Hydroxybenzoyl-Coa Reductase From Thauera
Aromatica
pdb|1SB3|F Chain F, Structure Of 4-Hydroxybenzoyl-Coa Reductase From Thauera
Aromatica
Length = 161
Score = 70.1 bits (170), Expect = 7e-12, Method: Composition-based stats.
Identities = 31/65 (47%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 21 LQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLAGNLCRCTGYRPIVDA 80
LQ + G+QCGFCTPG IM+ +LLR + + P+ ++I+ +LAGNLCRCTGY I+ +
Sbjct: 88 LQAAFHEKLGTQCGFCTPGMIMASEALLRKNPS-PSRDEIKAALAGNLCRCTGYVKIIKS 146
Query: 81 FRVFA 85
A
Sbjct: 147 VETAA 151
>pdb|1T3Q|A Chain A, Crystal Structure Of Quinoline 2-Oxidoreductase From
Pseudomonas Putida 86
pdb|1T3Q|D Chain D, Crystal Structure Of Quinoline 2-Oxidoreductase From
Pseudomonas Putida 86
Length = 168
Score = 68.6 bits (166), Expect = 2e-11, Method: Composition-based stats.
Identities = 28/60 (46%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 21 LQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLAGNLCRCTGYRPIVDA 80
LQ+S R H QCGFCT G + + S+L + P+ +++ E ++GNLCRCTGY I+DA
Sbjct: 95 LQDSFRRHHALQCGFCTAGMLATARSIL-AENPAPSRDEVREVMSGNLCRCTGYETIIDA 153
>pdb|3HRD|D Chain D, Crystal Structure Of Nicotinate Dehydrogenase
pdb|3HRD|H Chain H, Crystal Structure Of Nicotinate Dehydrogenase
Length = 160
Score = 63.9 bits (154), Expect = 6e-10, Method: Composition-based stats.
Identities = 28/63 (44%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 20 VLQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLAGNLCRCTGYRPIVD 79
+LQ+ + + QCG+CTPG I++ +LL PT+E+I +++GNLCRCTGY I
Sbjct: 88 LLQQCFLEAGAVQCGYCTPGMILTAKALL-DKNPDPTDEEITVAMSGNLCRCTGYIKIHA 146
Query: 80 AFR 82
A R
Sbjct: 147 AVR 149
>pdb|3HRD|C Chain C, Crystal Structure Of Nicotinate Dehydrogenase
pdb|3HRD|G Chain G, Crystal Structure Of Nicotinate Dehydrogenase
Length = 296
Score = 59.7 bits (143), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 114/268 (42%), Gaps = 18/268 (6%)
Query: 177 LKWYRPLKLQHLLELKSKYPD--SKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLN 234
+++ P L+ L +Y D ++ G T++ IE+ + + V+I + + EL +
Sbjct: 4 FEFFAPKTLEEAKGLLHQYKDVPPAIIAGGTDLVIEINDRWEKPDVVIDIKKLKELEYIR 63
Query: 235 VKDDGLEIGAAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGN 294
V+++ + IGA T++ E S +A + QI+N+ ++GGN
Sbjct: 64 VEENTIHIGALSTFTQI---------ENHPFIRSHVRALYKAASQVGSPQIRNLGTIGGN 114
Query: 295 ICTASPISDLNPLWMASGAKFHIVDCKGNIRTTMAEEFFLG---YRKVDLTSGEILLSIF 351
+ T+S D A + +G R +FF G R+ L + EI+ +
Sbjct: 115 LSTSSVAGDGVSAMTTLDATVVLESVRGT-RQMKLTDFFDGEGFKRRNALEADEIMTEVI 173
Query: 352 LPWTRPFEFVKEFKQAHRRDDDIALVNAGMRVYLEEKDEEWVVSDALLVYGGVAPLSLSA 411
+ +K A R+ I+++ GM V + D+ V + A + G + L
Sbjct: 174 IDRPDAHSASAFYKLAKRKSLAISVIGGGMAVKV---DDAGVCTWASMRGGCIGRYPLHF 230
Query: 412 KKTKTFIVGKSWSQELLQNALKILQTDI 439
K+ + +VG + E ++ L IL +
Sbjct: 231 KQAEEMLVGAPLTMETMEATLPILHDTV 258
>pdb|1FFV|C Chain C, Carbon Monoxide Dehydrogenase From Hydrogenophaga
Pseudoflava
pdb|1FFV|F Chain F, Carbon Monoxide Dehydrogenase From Hydrogenophaga
Pseudoflava
Length = 287
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 106/234 (45%), Gaps = 23/234 (9%)
Query: 197 DSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELLKMFR 256
D+KLL G + M+L+ Q + LI + +PEL + + + IGA +L+
Sbjct: 27 DAKLLAGGHSLLPMMKLRFAQPEHLIDINRIPELRGIREEGSTVVIGAMTVENDLIS--S 84
Query: 257 KVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPLWMASGAKFH 316
+V R E K A Q++N ++GG+I P +D L +A A F
Sbjct: 85 PIVQAR-------LPLLAEAAKLIADPQVRNRGTIGGDIAHGDPGNDHPALSIAVEAHF- 136
Query: 317 IVDCKGNIRTTMAEEFFLGYRKVDLTSGEILLSIFLPWTRPFEFVK----EFKQAHRRDD 372
+++ RT A+ FFLG L E+++ I +P F + +++ R+
Sbjct: 137 VLEGPNGRRTVPADGFFLGTYMTLLEENEVMVEIRVP-----AFAQGTGWAYEKLKRKTG 191
Query: 373 DIALVNAGMRVYLEEKDEEWVVSDALLVYGGVAPLSLSAKKTKTFIVGKSWSQE 426
D A AG V + + VS + VAP +L A+ + ++GK++++E
Sbjct: 192 DWA--TAGCAVVMRKSGN--TVSHIRIALTNVAPTALRAEAAEAALLGKAFTKE 241
>pdb|1FFU|C Chain C, Carbon Monoxide Dehydrogenase From Hydrogenophaga
Pseudoflava Which Lacks The Mo-Pyranopterin Moiety Of
The Molybdenum Cofactor
pdb|1FFU|F Chain F, Carbon Monoxide Dehydrogenase From Hydrogenophaga
Pseudoflava Which Lacks The Mo-Pyranopterin Moiety Of
The Molybdenum Cofactor
Length = 287
Score = 57.0 bits (136), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 105/237 (44%), Gaps = 29/237 (12%)
Query: 197 DSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELLKMFR 256
D+KLL G + M+L+ Q + LI + +PEL + + + IGA +L+
Sbjct: 27 DAKLLAGGHSLLPMMKLRFAQPEHLIDINRIPELRGIREEGSTVVIGAMTVENDLIS--S 84
Query: 257 KVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPLWMASGAKFH 316
+V R E K A Q++N ++GG+I P +D L +A A F
Sbjct: 85 PIVQAR-------LPLLAEAAKLIADPQVRNRGTIGGDIAHGDPGNDHPALSIAVEAHF- 136
Query: 317 IVDCKGNIRTTMAEEFFLGYRKVDLTSGEILLSIFLP-------WTRPFEFVKEFKQAHR 369
+++ RT A+ FFLG L E+++ I +P W +++ R
Sbjct: 137 VLEGPNGRRTVPADGFFLGTYMTLLEENEVMVEIRVPAFAAGTGWA--------YEKLKR 188
Query: 370 RDDDIALVNAGMRVYLEEKDEEWVVSDALLVYGGVAPLSLSAKKTKTFIVGKSWSQE 426
+ D A AG V + + VS + VAP +L A+ + ++GK++++E
Sbjct: 189 KTGDWA--TAGCAVVM--RKSGGTVSHIRIALTNVAPTALRAEAAEAALLGKAFTKE 241
>pdb|1N5W|C Chain C, Crystal Structure Of The Cu,Mo-Co Dehydrogenase (Codh);
Oxidized Form
pdb|1N5W|F Chain F, Crystal Structure Of The Cu,Mo-Co Dehydrogenase (Codh);
Oxidized Form
pdb|1N60|C Chain C, Crystal Structure Of The Cu,Mo-Co Dehydrogenase (Codh);
Cyanide- Inactivated Form
pdb|1N60|F Chain F, Crystal Structure Of The Cu,Mo-Co Dehydrogenase (Codh);
Cyanide- Inactivated Form
pdb|1N61|C Chain C, Crystal Structure Of The Cu,Mo-Co Dehydrogenase (Codh);
Dithionite Reduced State
pdb|1N61|F Chain F, Crystal Structure Of The Cu,Mo-Co Dehydrogenase (Codh);
Dithionite Reduced State
pdb|1N62|C Chain C, Crystal Structure Of The Mo,cu-co Dehydrogenase (codh), N-
Butylisocyanide-bound State
pdb|1N62|F Chain F, Crystal Structure Of The Mo,cu-co Dehydrogenase (codh), N-
Butylisocyanide-bound State
pdb|1N63|C Chain C, Crystal Structure Of The Cu,Mo-Co Dehydrogenase (Codh);
Carbon Monoxide Reduced State
pdb|1N63|F Chain F, Crystal Structure Of The Cu,Mo-Co Dehydrogenase (Codh);
Carbon Monoxide Reduced State
Length = 288
Score = 37.0 bits (84), Expect = 0.067, Method: Composition-based stats.
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Query: 281 AGTQIKNVASVGGNICTASPISDLNPLWMASGAKFHIVDCKGNIRTTMAEEFFLGYRKVD 340
A QI+ + ++GGN P +D+ L GA + + +G R A +++ G
Sbjct: 102 ADPQIRYMGTIGGNAANGDPGNDMPALMQCLGAAYELTGPEG-ARIVAARDYYQGAYFTA 160
Query: 341 LTSGEILLSIFLP 353
+ GE+L +I +P
Sbjct: 161 IEPGELLTAIRIP 173
>pdb|1ZXI|C Chain C, Reconstituted Co Dehydrogenase From Oligotropha
Carboxidovorans
pdb|1ZXI|F Chain F, Reconstituted Co Dehydrogenase From Oligotropha
Carboxidovorans
Length = 288
Score = 37.0 bits (84), Expect = 0.069, Method: Composition-based stats.
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Query: 281 AGTQIKNVASVGGNICTASPISDLNPLWMASGAKFHIVDCKGNIRTTMAEEFFLGYRKVD 340
A QI+ + ++GGN P +D+ L GA + + +G R A +++ G
Sbjct: 102 ADPQIRYMGTIGGNAANGDPGNDMPALMQCLGAAYELTGPEG-ARIVAARDYYQGAYFTA 160
Query: 341 LTSGEILLSIFLP 353
+ GE+L +I +P
Sbjct: 161 IEPGELLTAIRIP 173
>pdb|4GIP|D Chain D, Structure Of The Cleavage-Activated Prefusion Form Of The
Parainfluenza Virus 5 (Piv5) Fusion Protein
pdb|4GIP|E Chain E, Structure Of The Cleavage-Activated Prefusion Form Of The
Parainfluenza Virus 5 (Piv5) Fusion Protein
pdb|4GIP|F Chain F, Structure Of The Cleavage-Activated Prefusion Form Of The
Parainfluenza Virus 5 (Piv5) Fusion Protein
Length = 409
Score = 32.7 bits (73), Expect = 1.5, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 9/97 (9%)
Query: 7 NANKLLTSLDLRYVLQESLVRSH-GSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLA 65
N +++ L R ++ SL++++ SQC TP + Y+ +Q + L
Sbjct: 195 NNQEVMAQLPTRVMVTGSLIQAYPASQCTI-TPNTVYCRYN---DAQV--LSDDTMACLQ 248
Query: 66 GNLCRCTGYRPIVDAFRV-FAKTNDALYTNMSSMSLK 101
GNL RCT + P+V +F F + +Y N SM K
Sbjct: 249 GNLTRCT-FSPVVGSFLTRFVLFDGIVYANCRSMLCK 284
>pdb|2B9B|A Chain A, Structure Of The Parainfluenza Virus 5 F Protein In Its
Metastable, Pre-Fusion Conformation
pdb|2B9B|B Chain B, Structure Of The Parainfluenza Virus 5 F Protein In Its
Metastable, Pre-Fusion Conformation
pdb|2B9B|C Chain C, Structure Of The Parainfluenza Virus 5 F Protein In Its
Metastable, Pre-Fusion Conformation
Length = 497
Score = 31.6 bits (70), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 9/98 (9%)
Query: 6 FNANKLLTSLDLRYVLQESLVRSH-GSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESL 64
N +++ L R ++ SL++++ SQC TP + Y+ + L
Sbjct: 275 INNQEVMAQLPTRVMVTGSLIQAYPASQCTI-TPNTVYCRYN-----DAQVLSDDTMACL 328
Query: 65 AGNLCRCTGYRPIVDAFRV-FAKTNDALYTNMSSMSLK 101
GNL RCT + P+V +F F + +Y N SM K
Sbjct: 329 QGNLTRCT-FSPVVGSFLTRFVLFDGIVYANCRSMLCK 365
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.135 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,738,722
Number of Sequences: 62578
Number of extensions: 1597024
Number of successful extensions: 3528
Number of sequences better than 100.0: 46
Number of HSP's better than 100.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 3306
Number of HSP's gapped (non-prelim): 61
length of query: 1276
length of database: 14,973,337
effective HSP length: 110
effective length of query: 1166
effective length of database: 8,089,757
effective search space: 9432656662
effective search space used: 9432656662
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)