Query 000808
Match_columns 1275
No_of_seqs 650 out of 5015
Neff 8.5
Searched_HMMs 46136
Date Mon Apr 1 23:49:34 2013
Command hhsearch -i /work/01045/syshi/lefta3m/000808.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/leftcdd/000808hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0065 Pleiotropic drug resis 100.0 7E-198 1E-202 1796.2 90.6 1209 1-1275 143-1387(1391)
2 PLN03140 ABC transporter G fam 100.0 2E-190 4E-195 1868.0 132.1 1272 1-1275 193-1470(1470)
3 TIGR00956 3a01205 Pleiotropic 100.0 1E-167 3E-172 1661.9 125.3 1207 1-1272 89-1391(1394)
4 KOG0061 Transporter, ABC super 100.0 8.5E-96 2E-100 897.1 60.1 576 675-1275 23-612 (613)
5 PLN03211 ABC transporter G-25; 100.0 8.1E-94 1.8E-98 889.7 64.2 580 675-1272 37-659 (659)
6 TIGR00955 3a01204 The Eye Pigm 100.0 1.4E-93 3E-98 891.1 62.2 565 701-1275 36-617 (617)
7 TIGR00956 3a01205 Pleiotropic 100.0 7.7E-91 1.7E-95 926.0 63.7 588 674-1272 26-695 (1394)
8 PLN03140 ABC transporter G fam 100.0 5.2E-90 1.1E-94 912.0 60.5 591 674-1272 128-790 (1470)
9 KOG0065 Pleiotropic drug resis 100.0 2.6E-85 5.6E-90 804.6 42.4 562 702-1273 127-732 (1391)
10 KOG0054 Multidrug resistance-a 100.0 2E-75 4.4E-80 739.2 38.5 760 1-917 549-1359(1381)
11 KOG0061 Transporter, ABC super 100.0 1.4E-71 3E-76 683.2 51.3 548 1-596 58-608 (613)
12 KOG0055 Multidrug/pheromone ex 100.0 6.6E-73 1.4E-77 698.1 37.9 778 1-915 381-1208(1228)
13 TIGR00955 3a01204 The Eye Pigm 100.0 7.6E-71 1.6E-75 686.9 55.4 551 1-595 53-612 (617)
14 PLN03211 ABC transporter G-25; 100.0 4.2E-70 9.2E-75 677.7 55.3 548 1-596 96-658 (659)
15 TIGR01257 rim_protein retinal- 100.0 3.9E-67 8.5E-72 691.9 67.7 223 677-926 1937-2161(2272)
16 PLN03130 ABC transporter C fam 100.0 1.6E-67 3.4E-72 709.1 44.8 213 676-917 1236-1458(1622)
17 PLN03232 ABC transporter C fam 100.0 1.3E-66 2.8E-71 701.6 39.4 212 676-916 1233-1454(1495)
18 TIGR00957 MRP_assoc_pro multi 100.0 4.8E-65 1E-69 687.4 43.2 213 676-917 1283-1505(1522)
19 COG1123 ATPase components of v 100.0 1.1E-62 2.4E-67 570.6 42.7 459 1-915 37-514 (539)
20 PTZ00243 ABC transporter; Prov 100.0 5.6E-63 1.2E-67 664.6 43.7 212 676-916 1307-1529(1560)
21 TIGR01271 CFTR_protein cystic 100.0 2E-62 4.4E-67 659.6 47.2 211 676-916 1216-1436(1490)
22 PTZ00265 multidrug resistance 100.0 8.4E-62 1.8E-66 647.6 51.3 218 676-916 1164-1448(1466)
23 PRK13549 xylose transporter AT 100.0 2.8E-61 6.2E-66 591.4 41.6 223 678-918 260-492 (506)
24 PRK10762 D-ribose transporter 100.0 4.7E-61 1E-65 588.7 41.9 205 705-918 267-482 (501)
25 PRK10261 glutathione transport 100.0 9.4E-61 2E-65 597.0 44.9 227 677-916 313-549 (623)
26 PRK09700 D-allose transporter 100.0 4.1E-61 8.9E-66 591.1 39.0 202 705-915 278-493 (510)
27 TIGR03269 met_CoM_red_A2 methy 100.0 1.8E-60 4E-65 586.8 43.5 217 678-915 280-512 (520)
28 PRK15134 microcin C ABC transp 100.0 2.9E-60 6.4E-65 585.6 43.0 202 703-915 299-510 (529)
29 PRK15439 autoinducer 2 ABC tra 100.0 1.9E-60 4.1E-65 583.3 40.5 204 705-917 278-489 (510)
30 TIGR02633 xylG D-xylose ABC tr 100.0 5.3E-60 1.1E-64 580.5 42.6 206 703-916 273-488 (500)
31 PRK11288 araG L-arabinose tran 100.0 8.9E-60 1.9E-64 577.5 40.4 207 704-919 267-484 (501)
32 PRK10982 galactose/methyl gala 100.0 9.6E-59 2.1E-63 567.5 39.9 216 677-916 250-476 (491)
33 PRK10938 putative molybdenum t 100.0 1.1E-57 2.4E-62 558.5 36.9 215 677-913 260-485 (490)
34 COG4172 ABC-type uncharacteriz 100.0 7.4E-57 1.6E-61 487.0 36.8 452 2-915 39-511 (534)
35 PRK15064 ABC transporter ATP-b 100.0 8.1E-56 1.8E-60 546.2 40.7 198 677-915 319-520 (530)
36 PRK11819 putative ABC transpor 100.0 8.1E-55 1.7E-59 538.6 48.2 201 677-914 324-527 (556)
37 TIGR03719 ABC_ABC_ChvD ATP-bin 100.0 2.3E-54 5.1E-59 534.7 49.2 201 677-914 322-525 (552)
38 PRK13409 putative ATPase RIL; 100.0 4.6E-54 1E-58 527.9 36.6 198 677-916 340-538 (590)
39 PRK10636 putative ABC transpor 100.0 3.3E-52 7.1E-57 520.1 43.0 197 677-915 312-512 (638)
40 PRK11147 ABC transporter ATPas 100.0 5.5E-52 1.2E-56 520.0 42.2 202 677-915 319-523 (635)
41 COG1129 MglA ABC-type sugar tr 100.0 1.5E-50 3.2E-55 466.9 37.1 202 705-915 274-485 (500)
42 COG0488 Uup ATPase components 100.0 2E-49 4.3E-54 472.2 40.7 199 675-914 319-519 (530)
43 PLN03073 ABC transporter F fam 100.0 1.2E-49 2.7E-54 496.6 40.1 200 677-915 508-709 (718)
44 COG3845 ABC-type uncharacteriz 100.0 1.3E-46 2.9E-51 423.0 35.2 222 676-917 256-489 (501)
45 COG1126 GlnQ ABC-type polar am 100.0 1.1E-45 2.5E-50 372.9 21.2 214 678-915 3-220 (240)
46 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 9.4E-43 2E-47 370.8 23.4 218 677-918 4-225 (254)
47 COG1135 AbcC ABC-type metal io 100.0 4.8E-43 1E-47 372.1 20.6 218 678-915 2-226 (339)
48 COG1127 Ttg2A ABC-type transpo 100.0 5.1E-43 1.1E-47 359.4 19.7 230 676-929 7-248 (263)
49 COG1125 OpuBA ABC-type proline 100.0 3.3E-43 7.1E-48 361.2 17.2 214 678-916 2-221 (309)
50 COG3638 ABC-type phosphate/pho 100.0 9.4E-43 2E-47 356.5 19.5 225 677-922 3-239 (258)
51 COG1131 CcmA ABC-type multidru 100.0 1.7E-42 3.8E-47 390.5 23.7 215 677-915 4-221 (293)
52 COG1116 TauB ABC-type nitrate/ 100.0 1.5E-42 3.3E-47 363.0 21.0 204 677-906 3-207 (248)
53 COG1120 FepC ABC-type cobalami 100.0 1.1E-42 2.4E-47 372.7 19.9 219 677-917 2-225 (258)
54 COG1136 SalX ABC-type antimicr 100.0 8.8E-42 1.9E-46 358.6 22.3 208 678-906 2-218 (226)
55 COG4555 NatA ABC-type Na+ tran 100.0 2.3E-42 5E-47 342.9 14.4 201 704-916 16-218 (245)
56 TIGR01257 rim_protein retinal- 100.0 1.5E-36 3.1E-41 402.8 73.0 218 675-916 926-1145(2272)
57 COG2884 FtsE Predicted ATPase 100.0 3.3E-41 7.2E-46 332.1 19.3 213 678-915 2-221 (223)
58 COG3839 MalK ABC-type sugar tr 100.0 3.1E-41 6.8E-46 375.5 20.2 215 677-916 3-219 (338)
59 COG1118 CysA ABC-type sulfate/ 100.0 2.1E-41 4.5E-46 358.4 16.9 207 701-917 13-224 (345)
60 COG1117 PstB ABC-type phosphat 100.0 9.5E-41 2.1E-45 335.0 20.1 219 676-916 6-233 (253)
61 COG3842 PotA ABC-type spermidi 100.0 4.3E-41 9.3E-46 376.5 19.1 217 676-916 4-222 (352)
62 KOG0927 Predicted transporter 100.0 5.1E-40 1.1E-44 370.0 25.1 202 675-915 387-591 (614)
63 COG1126 GlnQ ABC-type polar am 100.0 1.6E-40 3.5E-45 335.6 16.7 191 1-234 30-224 (240)
64 PRK13537 nodulation ABC transp 100.0 1.8E-39 4E-44 370.1 25.0 216 676-916 6-223 (306)
65 COG1137 YhbG ABC-type (unclass 100.0 1.1E-40 2.3E-45 330.7 9.9 207 701-917 15-225 (243)
66 COG3840 ThiQ ABC-type thiamine 100.0 2.1E-39 4.6E-44 316.1 16.9 197 708-916 17-215 (231)
67 TIGR02314 ABC_MetN D-methionin 100.0 8.8E-39 1.9E-43 366.5 25.1 218 678-916 2-226 (343)
68 PRK11650 ugpC glycerol-3-phosp 100.0 9.6E-39 2.1E-43 369.7 24.7 216 677-916 3-220 (356)
69 COG1124 DppF ABC-type dipeptid 100.0 6.2E-39 1.3E-43 331.8 20.3 217 677-916 3-227 (252)
70 TIGR03265 PhnT2 putative 2-ami 100.0 1.1E-38 2.4E-43 368.7 24.8 215 677-916 4-220 (353)
71 PRK11432 fbpC ferric transport 100.0 1.7E-38 3.6E-43 366.5 25.0 215 677-916 6-222 (351)
72 cd03261 ABC_Org_Solvent_Resist 100.0 1.9E-38 4.1E-43 350.7 23.7 213 679-915 2-221 (235)
73 PRK13536 nodulation factor exp 100.0 2.2E-38 4.8E-43 364.4 24.9 216 676-916 40-257 (340)
74 TIGR03258 PhnT 2-aminoethylpho 100.0 2.1E-38 4.5E-43 366.7 24.6 215 677-916 5-224 (362)
75 COG1125 OpuBA ABC-type proline 100.0 5.2E-39 1.1E-43 330.3 17.0 194 1-235 29-225 (309)
76 COG1122 CbiO ABC-type cobalt t 100.0 1.5E-38 3.3E-43 342.3 19.9 215 677-915 3-223 (235)
77 COG1135 AbcC ABC-type metal io 100.0 7.3E-39 1.6E-43 340.3 16.5 191 1-234 34-230 (339)
78 PRK10851 sulfate/thiosulfate t 100.0 5.2E-38 1.1E-42 363.2 24.6 217 678-916 3-222 (353)
79 cd03259 ABC_Carb_Solutes_like 100.0 5E-38 1.1E-42 342.1 22.9 210 679-913 2-213 (213)
80 PRK09452 potA putrescine/sperm 100.0 6.9E-38 1.5E-42 363.5 25.2 216 676-916 13-230 (375)
81 TIGR00960 3a0501s02 Type II (G 100.0 5.1E-38 1.1E-42 342.8 22.4 208 678-908 2-215 (216)
82 PRK11607 potG putrescine trans 100.0 1.5E-37 3.2E-42 361.6 26.4 216 676-916 18-235 (377)
83 cd03293 ABC_NrtD_SsuB_transpor 100.0 1.3E-37 2.8E-42 340.5 24.3 215 679-915 2-218 (220)
84 TIGR01188 drrA daunorubicin re 100.0 5.4E-38 1.2E-42 358.8 22.1 203 702-916 5-209 (302)
85 cd03269 ABC_putative_ATPase Th 100.0 1.1E-37 2.3E-42 338.7 23.2 209 679-913 2-210 (210)
86 cd03265 ABC_DrrA DrrA is the A 100.0 1E-37 2.2E-42 341.3 23.2 213 678-915 1-216 (220)
87 COG2274 SunT ABC-type bacterio 100.0 1.2E-36 2.5E-41 374.6 35.1 218 672-917 466-693 (709)
88 TIGR01288 nodI ATP-binding ABC 100.0 1.4E-37 3.1E-42 355.5 24.7 215 677-916 4-220 (303)
89 COG4152 ABC-type uncharacteriz 100.0 5E-38 1.1E-42 320.9 18.5 212 678-915 3-214 (300)
90 cd03301 ABC_MalK_N The N-termi 100.0 1.5E-37 3.3E-42 338.4 23.7 210 679-913 2-213 (213)
91 TIGR01186 proV glycine betaine 100.0 1E-37 2.2E-42 359.4 23.0 204 701-916 4-215 (363)
92 PRK11000 maltose/maltodextrin 100.0 1.5E-37 3.4E-42 362.4 24.7 215 677-916 3-219 (369)
93 PRK11153 metN DL-methionine tr 100.0 2E-37 4.3E-42 358.8 24.9 218 678-916 2-226 (343)
94 COG1118 CysA ABC-type sulfate/ 100.0 3.3E-38 7.2E-43 334.1 16.1 193 1-234 30-226 (345)
95 cd03296 ABC_CysA_sulfate_impor 100.0 3.1E-37 6.8E-42 341.8 24.7 217 677-915 2-221 (239)
96 PRK09536 btuD corrinoid ABC tr 100.0 1.7E-37 3.6E-42 361.9 23.5 219 677-917 3-225 (402)
97 cd03219 ABC_Mj1267_LivG_branch 100.0 2.4E-37 5.1E-42 342.6 23.4 215 679-915 2-227 (236)
98 COG3839 MalK ABC-type sugar tr 100.0 3.7E-38 8.1E-43 351.0 16.9 203 1-254 31-234 (338)
99 cd03266 ABC_NatA_sodium_export 100.0 2.2E-37 4.7E-42 338.6 22.6 215 678-913 2-218 (218)
100 TIGR03522 GldA_ABC_ATP gliding 100.0 3E-37 6.6E-42 352.1 24.7 213 678-916 3-217 (301)
101 cd03218 ABC_YhbG The ABC trans 100.0 3E-37 6.5E-42 340.9 23.5 213 679-916 2-218 (232)
102 cd03260 ABC_PstB_phosphate_tra 100.0 2.3E-37 5E-42 340.4 22.4 214 679-916 2-225 (227)
103 COG4559 ABC-type hemin transpo 100.0 1.1E-37 2.5E-42 312.0 18.0 215 678-917 2-227 (259)
104 cd03234 ABCG_White The White s 100.0 4.6E-37 9.9E-42 337.4 24.7 221 678-913 4-226 (226)
105 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 2.6E-37 5.7E-42 337.9 22.0 208 679-908 2-217 (218)
106 COG1116 TauB ABC-type nitrate/ 100.0 7.6E-38 1.7E-42 327.7 16.4 177 1-222 31-207 (248)
107 KOG0058 Peptide exporter, ABC 100.0 8.3E-38 1.8E-42 367.3 18.6 217 674-915 462-686 (716)
108 cd03268 ABC_BcrA_bacitracin_re 100.0 3.4E-37 7.4E-42 334.2 21.9 206 679-913 2-208 (208)
109 COG0410 LivF ABC-type branched 100.0 2.1E-37 4.7E-42 318.3 19.1 215 678-918 4-224 (237)
110 cd03258 ABC_MetN_methionine_tr 100.0 5.3E-37 1.1E-41 339.0 22.7 217 678-915 2-225 (233)
111 cd03263 ABC_subfamily_A The AB 100.0 4.7E-37 1E-41 336.4 22.0 214 678-915 1-216 (220)
112 TIGR02673 FtsE cell division A 100.0 6.2E-37 1.3E-41 333.9 22.7 206 678-906 2-213 (214)
113 cd03256 ABC_PhnC_transporter A 100.0 4.2E-37 9.1E-42 341.9 21.8 217 679-916 2-230 (241)
114 COG0411 LivG ABC-type branched 100.0 1.1E-37 2.4E-42 323.0 15.8 218 678-917 5-236 (250)
115 COG1127 Ttg2A ABC-type transpo 100.0 1.4E-37 3E-42 319.4 16.2 194 1-235 36-235 (263)
116 PRK09493 glnQ glutamine ABC tr 100.0 1E-36 2.2E-41 338.1 24.3 214 678-915 2-220 (240)
117 cd03294 ABC_Pro_Gly_Bertaine T 100.0 5.5E-37 1.2E-41 344.9 22.1 203 701-915 35-245 (269)
118 PRK11629 lolD lipoprotein tran 100.0 2E-36 4.4E-41 333.9 26.1 217 677-915 5-229 (233)
119 PRK13637 cbiO cobalt transport 100.0 9.3E-37 2E-41 345.7 24.0 219 678-916 3-230 (287)
120 PRK11248 tauB taurine transpor 100.0 1.5E-36 3.2E-41 338.3 25.2 212 678-915 2-215 (255)
121 cd03226 ABC_cobalt_CbiO_domain 100.0 3.9E-37 8.4E-42 332.8 19.9 192 703-910 13-205 (205)
122 COG3842 PotA ABC-type spermidi 100.0 8E-38 1.7E-42 350.2 14.9 206 1-256 33-239 (352)
123 cd03295 ABC_OpuCA_Osmoprotecti 100.0 8.7E-37 1.9E-41 338.9 23.1 213 679-915 2-220 (242)
124 cd03292 ABC_FtsE_transporter F 100.0 8.9E-37 1.9E-41 332.8 22.7 206 679-908 2-213 (214)
125 TIGR02315 ABC_phnC phosphonate 100.0 5.8E-37 1.3E-41 341.1 20.8 218 678-916 2-231 (243)
126 COG4525 TauB ABC-type taurine 100.0 6.7E-37 1.5E-41 301.5 18.7 201 703-916 18-220 (259)
127 PRK11264 putative amino-acid A 100.0 1.4E-36 3.1E-41 339.2 24.0 214 678-915 4-228 (250)
128 PRK13647 cbiO cobalt transport 100.0 1.3E-36 2.7E-41 342.6 23.7 215 677-915 4-222 (274)
129 cd03224 ABC_TM1139_LivF_branch 100.0 1E-36 2.2E-41 334.4 22.0 210 679-915 2-216 (222)
130 PRK13651 cobalt transporter AT 100.0 1.5E-36 3.2E-41 345.2 23.8 219 678-916 3-250 (305)
131 PRK11831 putative ABC transpor 100.0 2E-36 4.3E-41 340.6 24.4 216 677-916 7-229 (269)
132 PRK13643 cbiO cobalt transport 100.0 1.8E-36 3.8E-41 343.6 24.0 218 678-916 2-229 (288)
133 cd03264 ABC_drug_resistance_li 100.0 1.4E-36 3E-41 330.2 21.9 208 679-913 2-211 (211)
134 PRK10908 cell division protein 100.0 2.4E-36 5.3E-41 330.9 23.8 208 678-909 2-215 (222)
135 PRK13631 cbiO cobalt transport 100.0 2E-36 4.3E-41 346.2 23.9 220 676-916 20-261 (320)
136 PRK11247 ssuB aliphatic sulfon 100.0 2.2E-36 4.9E-41 335.9 23.2 206 677-915 12-218 (257)
137 PRK13634 cbiO cobalt transport 100.0 2.3E-36 4.9E-41 343.1 23.6 218 678-916 3-231 (290)
138 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 3.6E-36 7.9E-41 332.6 24.6 212 678-915 2-216 (236)
139 TIGR00972 3a0107s01c2 phosphat 100.0 3.4E-36 7.4E-41 335.2 24.2 214 678-915 2-227 (247)
140 cd03262 ABC_HisP_GlnQ_permease 100.0 1.5E-36 3.3E-41 330.7 21.0 206 679-908 2-212 (213)
141 PRK10895 lipopolysaccharide AB 100.0 2.1E-36 4.5E-41 335.8 22.5 215 678-916 4-222 (241)
142 PRK13636 cbiO cobalt transport 100.0 2.9E-36 6.2E-41 341.3 23.8 216 677-916 5-227 (283)
143 PRK13646 cbiO cobalt transport 100.0 2.7E-36 5.9E-41 342.1 23.3 219 677-916 2-231 (286)
144 COG1131 CcmA ABC-type multidru 100.0 8.4E-37 1.8E-41 344.4 19.0 195 1-238 33-229 (293)
145 PRK10619 histidine/lysine/argi 100.0 4.7E-36 1E-40 335.9 24.8 214 677-915 5-236 (257)
146 cd03257 ABC_NikE_OppD_transpor 100.0 3.1E-36 6.8E-41 332.1 22.9 217 678-913 2-228 (228)
147 PRK15079 oligopeptide ABC tran 100.0 4.5E-36 9.7E-41 344.4 24.9 230 677-916 8-247 (331)
148 PRK13650 cbiO cobalt transport 100.0 2.6E-36 5.7E-41 340.9 22.4 217 677-916 4-225 (279)
149 PRK10070 glycine betaine trans 100.0 3.5E-36 7.7E-41 350.5 24.0 203 702-916 40-250 (400)
150 TIGR02211 LolD_lipo_ex lipopro 100.0 5.1E-36 1.1E-40 328.5 23.9 211 678-910 2-220 (221)
151 cd03235 ABC_Metallic_Cations A 100.0 1.5E-36 3.3E-41 330.5 19.4 199 703-913 12-213 (213)
152 cd03225 ABC_cobalt_CbiO_domain 100.0 2E-36 4.4E-41 329.1 20.3 193 703-906 14-210 (211)
153 PRK13641 cbiO cobalt transport 100.0 5.2E-36 1.1E-40 339.9 24.3 220 677-916 2-230 (287)
154 KOG0055 Multidrug/pheromone ex 100.0 2.6E-35 5.5E-40 365.5 32.3 218 674-918 347-574 (1228)
155 PRK13644 cbiO cobalt transport 100.0 4.3E-36 9.4E-41 338.2 23.1 214 678-916 2-220 (274)
156 PRK11124 artP arginine transpo 100.0 5.6E-36 1.2E-40 332.6 23.7 213 678-915 3-225 (242)
157 PRK13652 cbiO cobalt transport 100.0 5.2E-36 1.1E-40 338.4 23.5 215 678-916 4-223 (277)
158 COG3840 ThiQ ABC-type thiamine 100.0 1E-36 2.2E-41 297.4 15.2 191 1-234 27-218 (231)
159 TIGR03740 galliderm_ABC gallid 100.0 7.9E-36 1.7E-40 327.1 24.1 208 679-916 2-209 (223)
160 TIGR03415 ABC_choXWV_ATP choli 100.0 4.6E-36 9.9E-41 347.0 23.3 204 701-916 35-250 (382)
161 PRK11614 livF leucine/isoleuci 100.0 4.9E-36 1.1E-40 331.9 22.6 213 677-916 5-222 (237)
162 PRK14268 phosphate ABC transpo 100.0 8E-36 1.7E-40 334.1 24.5 215 676-915 11-237 (258)
163 TIGR01978 sufC FeS assembly AT 100.0 6.5E-36 1.4E-40 332.8 23.6 219 678-915 1-229 (243)
164 TIGR03005 ectoine_ehuA ectoine 100.0 7.7E-36 1.7E-40 333.4 23.9 214 678-915 1-231 (252)
165 PRK13548 hmuV hemin importer A 100.0 8.1E-36 1.8E-40 333.5 23.7 214 678-916 3-226 (258)
166 COG1117 PstB ABC-type phosphat 100.0 9.9E-37 2.1E-41 306.1 14.5 194 1-234 35-236 (253)
167 PRK14273 phosphate ABC transpo 100.0 1.1E-35 2.4E-40 332.5 24.7 215 677-915 7-233 (254)
168 PRK11300 livG leucine/isoleuci 100.0 8.4E-36 1.8E-40 334.1 23.7 218 677-916 5-239 (255)
169 PRK14247 phosphate ABC transpo 100.0 1.2E-35 2.6E-40 331.6 24.8 217 677-915 3-229 (250)
170 PRK14267 phosphate ABC transpo 100.0 1.1E-35 2.4E-40 332.5 24.4 217 677-915 4-232 (253)
171 COG4181 Predicted ABC-type tra 100.0 2.7E-36 5.8E-41 291.0 16.5 197 701-910 21-225 (228)
172 COG4988 CydD ABC-type transpor 100.0 2.2E-36 4.8E-41 349.5 19.0 214 675-917 318-540 (559)
173 COG4555 NatA ABC-type Na+ tran 100.0 8.4E-37 1.8E-41 303.4 13.4 191 1-235 30-222 (245)
174 TIGR03411 urea_trans_UrtD urea 100.0 1.1E-35 2.4E-40 330.4 24.0 216 678-916 3-227 (242)
175 PRK11231 fecE iron-dicitrate t 100.0 6.4E-36 1.4E-40 334.4 21.9 217 678-916 3-223 (255)
176 cd03298 ABC_ThiQ_thiamine_tran 100.0 7.6E-36 1.6E-40 324.5 21.9 208 679-913 2-211 (211)
177 PRK13635 cbiO cobalt transport 100.0 1.1E-35 2.5E-40 335.4 24.1 216 677-916 5-225 (279)
178 PRK13638 cbiO cobalt transport 100.0 9.6E-36 2.1E-40 335.7 23.5 213 678-915 2-220 (271)
179 COG4175 ProV ABC-type proline/ 100.0 2.1E-36 4.6E-41 319.9 16.1 202 704-917 42-251 (386)
180 PRK09984 phosphonate/organopho 100.0 1.4E-35 3.1E-40 333.0 23.5 220 677-916 4-238 (262)
181 PRK14242 phosphate transporter 100.0 2.1E-35 4.6E-40 330.3 24.7 221 675-915 4-232 (253)
182 PRK14241 phosphate transporter 100.0 2.2E-35 4.9E-40 330.7 24.9 217 677-915 4-237 (258)
183 KOG0057 Mitochondrial Fe/S clu 100.0 3.3E-36 7.2E-41 341.1 18.2 213 675-917 349-571 (591)
184 COG1120 FepC ABC-type cobalami 100.0 1.4E-36 3E-41 325.8 14.4 195 1-234 30-227 (258)
185 TIGR02769 nickel_nikE nickel i 100.0 1.8E-35 3.9E-40 332.3 24.1 224 678-916 3-236 (265)
186 TIGR03410 urea_trans_UrtE urea 100.0 1.2E-35 2.6E-40 327.4 22.0 212 678-917 1-218 (230)
187 TIGR01277 thiQ thiamine ABC tr 100.0 1.9E-35 4.1E-40 321.5 23.1 209 679-914 2-212 (213)
188 PRK10575 iron-hydroxamate tran 100.0 1.5E-35 3.2E-40 333.0 22.9 218 677-916 11-233 (265)
189 PRK13649 cbiO cobalt transport 100.0 2E-35 4.3E-40 335.0 24.2 218 678-916 3-230 (280)
190 PRK11308 dppF dipeptide transp 100.0 2.9E-35 6.2E-40 337.6 25.6 226 677-916 5-240 (327)
191 cd03233 ABC_PDR_domain1 The pl 100.0 2.1E-35 4.5E-40 317.5 22.9 196 677-913 3-202 (202)
192 PRK13639 cbiO cobalt transport 100.0 2.6E-35 5.7E-40 332.3 24.8 215 678-916 2-222 (275)
193 PRK10253 iron-enterobactin tra 100.0 1.3E-35 2.8E-40 333.4 22.2 219 676-916 6-229 (265)
194 PRK10744 pstB phosphate transp 100.0 2.6E-35 5.7E-40 330.3 24.5 218 674-915 10-239 (260)
195 cd03232 ABC_PDR_domain2 The pl 100.0 1.9E-35 4E-40 315.4 22.1 190 677-913 3-192 (192)
196 PRK10584 putative ABC transpor 100.0 3.9E-35 8.4E-40 322.9 25.2 213 677-911 6-226 (228)
197 cd03300 ABC_PotA_N PotA is an 100.0 2.6E-35 5.7E-40 324.6 23.9 212 679-915 2-215 (232)
198 PRK13632 cbiO cobalt transport 100.0 1.9E-35 4.1E-40 333.0 23.1 216 677-916 7-227 (271)
199 PRK14245 phosphate ABC transpo 100.0 3.2E-35 7E-40 328.0 24.5 215 677-915 3-229 (250)
200 TIGR03873 F420-0_ABC_ATP propo 100.0 1.8E-35 3.9E-40 331.1 22.5 217 678-916 2-222 (256)
201 PRK13549 xylose transporter AT 100.0 1.9E-35 4.1E-40 363.1 24.7 222 677-918 5-230 (506)
202 PRK11022 dppD dipeptide transp 100.0 4.2E-35 9.1E-40 336.6 25.9 222 677-916 3-239 (326)
203 TIGR01184 ntrCD nitrate transp 100.0 1.5E-35 3.3E-40 325.6 21.1 198 706-915 1-199 (230)
204 TIGR00968 3a0106s01 sulfate AB 100.0 3.4E-35 7.5E-40 324.6 23.8 212 679-915 2-215 (237)
205 PRK14235 phosphate transporter 100.0 4.3E-35 9.4E-40 329.4 24.8 217 676-915 18-246 (267)
206 PRK13547 hmuV hemin importer A 100.0 2.2E-35 4.8E-40 330.7 22.2 219 678-916 2-240 (272)
207 PRK13640 cbiO cobalt transport 100.0 2.3E-35 5E-40 333.7 22.5 218 677-916 5-228 (282)
208 COG0444 DppD ABC-type dipeptid 100.0 3E-35 6.5E-40 319.0 22.2 225 678-916 2-239 (316)
209 cd03267 ABC_NatA_like Similar 100.0 2.8E-35 6E-40 324.9 22.4 201 701-913 32-236 (236)
210 PRK13648 cbiO cobalt transport 100.0 4E-35 8.6E-40 330.3 24.0 216 677-916 7-227 (269)
211 PRK13645 cbiO cobalt transport 100.0 3.4E-35 7.3E-40 334.2 23.6 220 676-915 5-235 (289)
212 PRK14269 phosphate ABC transpo 100.0 4.1E-35 9E-40 326.1 23.7 215 678-915 3-225 (246)
213 COG1136 SalX ABC-type antimicr 100.0 9.7E-36 2.1E-40 313.0 17.5 181 1-224 33-220 (226)
214 TIGR03608 L_ocin_972_ABC putat 100.0 2.7E-35 5.9E-40 319.1 21.5 189 703-903 11-206 (206)
215 PRK13633 cobalt transporter AT 100.0 2.9E-35 6.4E-40 332.8 22.6 220 677-916 4-229 (280)
216 PRK14250 phosphate ABC transpo 100.0 2.9E-35 6.4E-40 326.0 21.9 209 677-915 3-216 (241)
217 PRK09473 oppD oligopeptide tra 100.0 5.6E-35 1.2E-39 335.7 25.0 225 677-916 12-247 (330)
218 PRK14237 phosphate transporter 100.0 7.9E-35 1.7E-39 327.2 25.4 224 672-915 15-246 (267)
219 cd03299 ABC_ModC_like Archeal 100.0 6E-35 1.3E-39 322.2 23.9 211 679-915 2-214 (235)
220 cd03213 ABCG_EPDR ABCG transpo 100.0 5.8E-35 1.3E-39 311.9 23.0 190 677-913 3-194 (194)
221 PRK14259 phosphate ABC transpo 100.0 4.8E-35 1E-39 329.1 23.4 215 676-915 12-248 (269)
222 PRK15093 antimicrobial peptide 100.0 6.7E-35 1.5E-39 336.2 25.2 224 677-916 3-244 (330)
223 PRK10771 thiQ thiamine transpo 100.0 4.4E-35 9.5E-40 323.1 22.6 211 678-915 2-214 (232)
224 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 1.3E-35 2.9E-40 316.2 17.5 193 1-235 32-227 (254)
225 PRK14256 phosphate ABC transpo 100.0 9E-35 2E-39 324.8 25.1 221 676-915 3-231 (252)
226 PRK14257 phosphate ABC transpo 100.0 9E-35 1.9E-39 333.4 25.6 222 676-916 79-309 (329)
227 PRK11144 modC molybdate transp 100.0 4.8E-35 1E-39 340.1 23.2 191 708-916 16-214 (352)
228 TIGR02142 modC_ABC molybdenum 100.0 5.4E-35 1.2E-39 340.4 23.4 195 708-916 15-217 (354)
229 PRK15112 antimicrobial peptide 100.0 6.8E-35 1.5E-39 327.7 23.2 224 677-915 4-234 (267)
230 PRK14239 phosphate transporter 100.0 1E-34 2.2E-39 324.8 24.4 215 677-915 5-231 (252)
231 cd03297 ABC_ModC_molybdenum_tr 100.0 6.7E-35 1.4E-39 317.6 22.0 191 708-913 16-214 (214)
232 PRK14274 phosphate ABC transpo 100.0 9.6E-35 2.1E-39 325.8 23.8 215 677-915 12-238 (259)
233 COG4987 CydC ABC-type transpor 100.0 9.8E-36 2.1E-40 337.3 15.8 212 677-916 336-557 (573)
234 PRK14260 phosphate ABC transpo 100.0 1.2E-34 2.5E-39 324.8 24.1 217 677-916 7-239 (259)
235 PRK14244 phosphate ABC transpo 100.0 1.1E-34 2.4E-39 323.8 23.8 219 678-915 6-232 (251)
236 PRK14270 phosphate ABC transpo 100.0 1.3E-34 2.8E-39 323.4 24.3 216 677-916 4-231 (251)
237 PRK14240 phosphate transporter 100.0 1.6E-34 3.4E-39 322.7 24.9 215 677-915 3-229 (250)
238 COG4604 CeuD ABC-type enteroch 100.0 3.2E-36 7E-41 297.6 9.6 207 701-917 12-222 (252)
239 PRK10762 D-ribose transporter 100.0 8.9E-35 1.9E-39 356.7 24.4 220 677-918 4-228 (501)
240 PRK14262 phosphate ABC transpo 100.0 2.1E-34 4.5E-39 321.6 24.9 215 677-915 3-229 (250)
241 PRK13642 cbiO cobalt transport 100.0 1.5E-34 3.2E-39 326.6 23.8 217 677-916 4-225 (277)
242 TIGR02770 nickel_nikD nickel i 100.0 8.8E-35 1.9E-39 320.0 21.2 201 705-915 1-210 (230)
243 PRK11701 phnK phosphonate C-P 100.0 1.5E-34 3.3E-39 323.9 23.4 215 677-915 6-236 (258)
244 PRK14236 phosphate transporter 100.0 2.7E-34 5.8E-39 323.8 25.3 216 676-915 24-251 (272)
245 PRK09700 D-allose transporter 100.0 9.6E-35 2.1E-39 357.5 23.6 219 677-917 5-231 (510)
246 PRK13543 cytochrome c biogenes 100.0 1.6E-34 3.6E-39 313.9 22.6 201 677-904 11-211 (214)
247 PRK14272 phosphate ABC transpo 100.0 2.8E-34 6E-39 321.3 24.8 216 677-915 4-231 (252)
248 TIGR02982 heterocyst_DevA ABC 100.0 2.3E-34 4.9E-39 314.7 23.5 211 678-909 2-219 (220)
249 PRK11174 cysteine/glutathione 100.0 3.3E-35 7.1E-40 369.0 19.2 211 676-916 348-568 (588)
250 PRK14258 phosphate ABC transpo 100.0 2.7E-34 6E-39 322.0 24.6 222 677-916 7-241 (261)
251 COG3638 ABC-type phosphate/pho 100.0 4.7E-35 1E-39 300.0 16.7 200 1-235 32-237 (258)
252 PRK10418 nikD nickel transport 100.0 2.7E-34 5.8E-39 321.0 24.4 214 676-915 3-225 (254)
253 PRK14253 phosphate ABC transpo 100.0 2.3E-34 5E-39 321.1 23.7 215 677-915 3-228 (249)
254 PRK13538 cytochrome c biogenes 100.0 1.4E-34 3.1E-39 312.1 21.3 187 678-890 2-190 (204)
255 PRK00349 uvrA excinuclease ABC 100.0 1.4E-33 3.1E-38 356.2 33.4 123 778-916 792-923 (943)
256 PRK15056 manganese/iron transp 100.0 1.8E-34 3.9E-39 325.3 22.4 219 677-917 6-227 (272)
257 cd03231 ABC_CcmA_heme_exporter 100.0 1.5E-34 3.3E-39 311.0 20.8 195 679-903 2-198 (201)
258 PRK14275 phosphate ABC transpo 100.0 3.2E-34 6.9E-39 324.8 24.4 215 677-915 39-265 (286)
259 PRK14248 phosphate ABC transpo 100.0 3.3E-34 7.1E-39 322.9 24.3 215 677-915 21-247 (268)
260 cd03289 ABCC_CFTR2 The CFTR su 100.0 9.9E-35 2.2E-39 324.5 19.9 212 677-917 2-222 (275)
261 PRK14251 phosphate ABC transpo 100.0 3.6E-34 7.9E-39 319.9 24.3 215 677-915 4-230 (251)
262 PRK14271 phosphate ABC transpo 100.0 4.1E-34 8.9E-39 322.2 24.6 219 677-915 21-246 (276)
263 cd03220 ABC_KpsT_Wzt ABC_KpsT_ 100.0 2.6E-34 5.7E-39 314.2 22.3 192 701-913 33-224 (224)
264 PRK14261 phosphate ABC transpo 100.0 3.8E-34 8.2E-39 320.0 24.1 215 677-915 6-232 (253)
265 PRK10419 nikE nickel transport 100.0 3.1E-34 6.6E-39 322.4 23.4 225 678-917 4-238 (268)
266 PRK14249 phosphate ABC transpo 100.0 4.4E-34 9.6E-39 319.0 24.6 219 677-915 4-230 (251)
267 PRK14254 phosphate ABC transpo 100.0 4.6E-34 9.9E-39 323.1 24.9 213 677-915 39-264 (285)
268 TIGR02633 xylG D-xylose ABC tr 100.0 2.9E-34 6.2E-39 352.7 25.1 220 678-917 2-227 (500)
269 PRK14263 phosphate ABC transpo 100.0 6.3E-34 1.4E-38 318.3 25.4 219 676-915 7-240 (261)
270 PRK15439 autoinducer 2 ABC tra 100.0 2.5E-34 5.4E-39 352.8 24.1 212 677-917 11-226 (510)
271 TIGR01166 cbiO cobalt transpor 100.0 2.5E-34 5.4E-39 307.0 20.8 179 702-890 4-188 (190)
272 CHL00131 ycf16 sulfate ABC tra 100.0 6.3E-34 1.4E-38 318.4 24.7 221 677-916 7-237 (252)
273 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 6.8E-35 1.5E-39 371.6 19.1 210 676-916 450-669 (686)
274 PRK00635 excinuclease ABC subu 100.0 3E-33 6.5E-38 365.6 34.7 136 774-917 759-903 (1809)
275 PRK14255 phosphate ABC transpo 100.0 5.8E-34 1.2E-38 318.5 24.2 215 677-915 5-231 (252)
276 COG1245 Predicted ATPase, RNas 100.0 9.7E-34 2.1E-38 312.0 25.1 173 706-904 357-530 (591)
277 PRK10247 putative ABC transpor 100.0 2.4E-34 5.2E-39 315.2 20.5 209 677-913 7-220 (225)
278 PRK14265 phosphate ABC transpo 100.0 5.8E-34 1.3E-38 320.9 24.1 216 676-916 19-254 (274)
279 PRK14238 phosphate transporter 100.0 5.4E-34 1.2E-38 320.9 23.8 215 677-915 24-250 (271)
280 COG1132 MdlB ABC-type multidru 100.0 4.1E-35 9E-40 365.8 16.2 214 675-917 326-549 (567)
281 PRK13546 teichoic acids export 100.0 1E-33 2.2E-38 315.5 25.1 219 676-916 3-228 (264)
282 PRK11288 araG L-arabinose tran 100.0 4.9E-34 1.1E-38 350.1 24.3 217 677-915 4-224 (501)
283 cd03252 ABCC_Hemolysin The ABC 100.0 1.7E-34 3.6E-39 319.9 18.2 209 679-915 2-220 (237)
284 COG4175 ProV ABC-type proline/ 100.0 8.1E-35 1.8E-39 308.0 14.5 192 1-235 56-254 (386)
285 cd03230 ABC_DR_subfamily_A Thi 100.0 4.1E-34 8.8E-39 299.9 19.7 168 679-906 2-171 (173)
286 PRK14243 phosphate transporter 100.0 5.6E-34 1.2E-38 319.8 22.1 214 677-915 10-243 (264)
287 TIGR02323 CP_lyasePhnK phospho 100.0 8.7E-34 1.9E-38 317.3 23.5 215 677-915 3-233 (253)
288 PRK14246 phosphate ABC transpo 100.0 1.1E-33 2.4E-38 315.5 24.1 216 677-915 10-236 (257)
289 PRK13539 cytochrome c biogenes 100.0 4.9E-34 1.1E-38 308.5 20.6 196 678-903 3-198 (207)
290 COG4618 ArpD ABC-type protease 100.0 1.9E-34 4.1E-39 323.3 17.8 227 666-917 323-557 (580)
291 PRK10982 galactose/methyl gala 100.0 4.4E-34 9.5E-39 350.0 22.8 207 703-918 11-221 (491)
292 KOG0062 ATPase component of AB 100.0 6.7E-34 1.4E-38 319.0 22.1 205 674-914 359-563 (582)
293 PRK10790 putative multidrug tr 100.0 3.5E-34 7.6E-39 359.7 22.1 211 676-916 339-559 (592)
294 PRK11650 ugpC glycerol-3-phosp 100.0 2.5E-34 5.4E-39 333.0 19.0 191 1-234 32-223 (356)
295 PRK11176 lipid transporter ATP 100.0 2.1E-34 4.4E-39 361.7 19.8 214 676-916 340-563 (582)
296 PRK09580 sufC cysteine desulfu 100.0 1.3E-33 2.8E-38 315.2 23.8 219 678-915 2-230 (248)
297 cd03245 ABCC_bacteriocin_expor 100.0 4.3E-34 9.4E-39 312.9 19.6 210 677-913 2-220 (220)
298 COG1123 ATPase components of v 100.0 1.2E-33 2.5E-38 329.0 24.0 224 677-916 5-240 (539)
299 PRK03695 vitamin B12-transport 100.0 7.2E-34 1.5E-38 315.9 21.3 198 705-916 11-218 (248)
300 COG1122 CbiO ABC-type cobalt t 100.0 3.2E-34 6.8E-39 308.9 17.7 191 2-235 33-228 (235)
301 PRK11432 fbpC ferric transport 100.0 3.2E-34 7E-39 330.9 18.8 191 1-234 34-225 (351)
302 PRK14266 phosphate ABC transpo 100.0 1.5E-33 3.2E-38 314.8 23.6 219 677-915 3-229 (250)
303 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 1.3E-34 2.8E-39 370.9 17.2 211 676-916 476-696 (710)
304 PRK11160 cysteine/glutathione 100.0 2.3E-34 4.9E-39 358.2 18.9 213 676-916 337-558 (574)
305 TIGR01186 proV glycine betaine 100.0 3.7E-34 8E-39 329.9 19.0 192 1-235 21-219 (363)
306 cd03251 ABCC_MsbA MsbA is an e 100.0 2.9E-34 6.4E-39 317.4 17.2 209 679-915 2-220 (234)
307 TIGR03258 PhnT 2-aminoethylpho 100.0 3.8E-34 8.3E-39 331.2 18.8 192 1-234 33-227 (362)
308 TIGR03265 PhnT2 putative 2-ami 100.0 4.6E-34 1E-38 330.3 19.1 192 1-235 32-224 (353)
309 TIGR02314 ABC_MetN D-methionin 100.0 4.7E-34 1E-38 327.5 19.0 191 1-234 33-229 (343)
310 PRK13540 cytochrome c biogenes 100.0 1.6E-33 3.5E-38 303.0 21.9 194 678-901 2-197 (200)
311 COG1137 YhbG ABC-type (unclass 100.0 6.6E-35 1.4E-39 289.6 10.2 193 1-235 32-228 (243)
312 cd03229 ABC_Class3 This class 100.0 6.1E-34 1.3E-38 300.1 18.2 170 679-906 2-177 (178)
313 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 3.4E-34 7.4E-39 317.6 17.0 210 679-915 2-221 (238)
314 PRK14252 phosphate ABC transpo 100.0 3E-33 6.5E-38 314.6 24.9 217 675-915 14-244 (265)
315 TIGR02324 CP_lyasePhnL phospho 100.0 1.8E-33 3.8E-38 308.9 22.4 210 678-904 2-223 (224)
316 COG4161 ArtP ABC-type arginine 100.0 6.1E-34 1.3E-38 271.3 16.1 214 678-915 3-225 (242)
317 PRK13537 nodulation ABC transp 100.0 4.8E-34 1E-38 325.6 18.5 191 1-235 35-227 (306)
318 COG2884 FtsE Predicted ATPase 100.0 4.9E-34 1.1E-38 281.6 15.9 184 1-228 30-219 (223)
319 TIGR03375 type_I_sec_LssB type 100.0 2.9E-34 6.3E-39 366.3 18.7 213 676-916 462-684 (694)
320 COG1124 DppF ABC-type dipeptid 100.0 4.6E-34 1E-38 295.7 16.5 190 2-235 36-231 (252)
321 COG4598 HisP ABC-type histidin 100.0 2.7E-34 5.9E-39 278.9 13.7 205 701-916 17-237 (256)
322 TIGR01189 ccmA heme ABC export 100.0 1.8E-33 3.8E-38 302.4 21.5 185 679-890 2-188 (198)
323 COG1129 MglA ABC-type sugar tr 100.0 1.5E-33 3.3E-38 326.0 22.4 229 676-926 7-242 (500)
324 cd03254 ABCC_Glucan_exporter_l 100.0 5.8E-34 1.2E-38 314.0 18.0 211 677-915 2-221 (229)
325 COG0396 sufC Cysteine desulfur 100.0 5.2E-33 1.1E-37 284.0 23.3 229 677-929 3-238 (251)
326 TIGR00630 uvra excinuclease AB 100.0 2.5E-32 5.5E-37 344.3 35.0 123 778-916 790-921 (924)
327 PRK13545 tagH teichoic acids e 100.0 2.7E-33 5.9E-38 327.4 24.2 209 677-917 21-229 (549)
328 TIGR01193 bacteriocin_ABC ABC- 100.0 4.3E-34 9.3E-39 365.6 19.0 211 676-915 472-692 (708)
329 PRK14264 phosphate ABC transpo 100.0 4.2E-33 9.2E-38 318.4 24.8 221 677-915 45-284 (305)
330 PRK09544 znuC high-affinity zi 100.0 2E-33 4.3E-38 311.8 21.4 199 677-916 4-205 (251)
331 PRK09452 potA putrescine/sperm 100.0 7.2E-34 1.6E-38 330.0 18.6 191 1-234 42-233 (375)
332 TIGR03269 met_CoM_red_A2 methy 100.0 2.1E-33 4.5E-38 346.5 23.9 216 678-916 1-254 (520)
333 KOG0058 Peptide exporter, ABC 100.0 2.5E-34 5.5E-39 338.0 14.8 193 1-235 496-691 (716)
334 TIGR00958 3a01208 Conjugate Tr 100.0 5.3E-34 1.1E-38 362.8 18.6 212 676-916 477-698 (711)
335 cd03215 ABC_Carb_Monos_II This 100.0 2E-33 4.4E-38 297.2 19.2 160 705-908 15-181 (182)
336 cd03244 ABCC_MRP_domain2 Domai 100.0 1.8E-33 3.9E-38 308.3 19.1 210 677-914 2-220 (221)
337 COG0411 LivG ABC-type branched 100.0 4.8E-34 1E-38 296.0 13.4 204 1-235 32-239 (250)
338 COG4148 ModC ABC-type molybdat 100.0 4.3E-34 9.2E-39 297.2 12.8 186 1-235 26-218 (352)
339 cd03217 ABC_FeS_Assembly ABC-t 100.0 3.6E-33 7.7E-38 299.9 20.5 183 679-915 2-189 (200)
340 PRK10261 glutathione transport 100.0 2.9E-33 6.3E-38 349.9 22.9 220 677-916 12-254 (623)
341 PRK15134 microcin C ABC transp 100.0 4.6E-33 9.9E-38 343.9 24.4 222 677-916 5-242 (529)
342 cd03253 ABCC_ATM1_transporter 100.0 1.3E-33 2.9E-38 312.6 17.5 208 679-915 2-219 (236)
343 COG4525 TauB ABC-type taurine 100.0 2.3E-33 5E-38 276.6 16.8 191 1-236 33-225 (259)
344 KOG0066 eIF2-interacting prote 100.0 2.3E-32 5E-37 297.1 26.1 194 674-907 583-778 (807)
345 TIGR01188 drrA daunorubicin re 100.0 1.6E-33 3.6E-38 321.9 18.0 191 1-235 21-213 (302)
346 COG0410 LivF ABC-type branched 100.0 1.5E-33 3.3E-38 289.9 15.8 191 1-235 31-226 (237)
347 cd03247 ABCC_cytochrome_bd The 100.0 2.8E-33 6E-38 295.2 18.2 176 678-913 1-178 (178)
348 KOG0056 Heavy metal exporter H 100.0 2.4E-34 5.3E-39 316.9 10.5 217 674-915 534-756 (790)
349 cd03248 ABCC_TAP TAP, the Tran 100.0 1.4E-33 3E-38 310.1 16.0 208 676-908 10-225 (226)
350 TIGR01842 type_I_sec_PrtD type 100.0 3E-33 6.6E-38 347.0 20.9 213 676-915 315-537 (544)
351 cd03246 ABCC_Protease_Secretio 100.0 4E-33 8.7E-38 292.4 18.6 168 679-908 2-172 (173)
352 PRK11607 potG putrescine trans 100.0 3.1E-33 6.6E-38 325.5 19.4 191 1-234 47-238 (377)
353 COG1119 ModF ABC-type molybden 100.0 2.8E-33 6.2E-38 289.9 16.6 218 675-914 29-256 (257)
354 TIGR02868 CydC thiol reductant 100.0 1.9E-33 4.1E-38 348.6 18.5 188 676-889 333-529 (529)
355 COG2274 SunT ABC-type bacterio 100.0 1.4E-33 2.9E-38 347.5 16.6 192 2-235 502-696 (709)
356 PRK13536 nodulation factor exp 100.0 3.8E-33 8.3E-38 321.0 19.2 191 1-235 69-261 (340)
357 PRK10851 sulfate/thiosulfate t 100.0 3.7E-33 8.1E-38 322.8 19.1 195 1-234 30-225 (353)
358 TIGR03771 anch_rpt_ABC anchore 100.0 5E-33 1.1E-37 304.1 18.9 194 711-916 1-197 (223)
359 PRK13657 cyclic beta-1,2-gluca 100.0 3.9E-33 8.5E-38 349.6 20.5 211 676-915 333-553 (588)
360 cd03261 ABC_Org_Solvent_Resist 100.0 5.2E-33 1.1E-37 307.3 18.5 192 1-234 28-225 (235)
361 TIGR01846 type_I_sec_HlyB type 100.0 2.3E-33 4.9E-38 357.8 17.7 214 675-916 453-676 (694)
362 cd03223 ABCD_peroxisomal_ALDP 100.0 1.1E-32 2.4E-37 286.4 19.2 164 679-908 2-165 (166)
363 PRK11000 maltose/maltodextrin 100.0 5.7E-33 1.2E-37 324.0 19.1 191 1-234 31-222 (369)
364 cd03288 ABCC_SUR2 The SUR doma 100.0 5.9E-33 1.3E-37 310.5 18.5 212 676-916 18-239 (257)
365 cd03214 ABC_Iron-Siderophores_ 100.0 3.6E-33 7.9E-38 294.7 15.6 175 680-913 2-180 (180)
366 cd03369 ABCC_NFT1 Domain 2 of 100.0 1.6E-32 3.4E-37 297.3 20.8 200 676-915 5-207 (207)
367 PRK13541 cytochrome c biogenes 100.0 2.2E-32 4.8E-37 292.9 21.4 191 678-900 2-192 (195)
368 TIGR02203 MsbA_lipidA lipid A 100.0 4.4E-33 9.4E-38 349.4 18.1 213 676-915 329-551 (571)
369 COG4619 ABC-type uncharacteriz 100.0 1.2E-33 2.6E-38 271.9 9.9 191 701-905 14-209 (223)
370 PRK10938 putative molybdenum t 100.0 8.5E-33 1.8E-37 338.9 19.7 206 678-916 4-220 (490)
371 PRK10789 putative multidrug tr 100.0 7.6E-33 1.6E-37 344.6 19.2 212 676-915 312-533 (569)
372 COG4148 ModC ABC-type molybdat 100.0 1.9E-33 4.2E-38 292.4 11.2 191 708-916 16-214 (352)
373 PRK11153 metN DL-methionine tr 100.0 1.3E-32 2.8E-37 318.6 19.1 191 1-234 33-229 (343)
374 COG4586 ABC-type uncharacteriz 100.0 5.2E-33 1.1E-37 289.0 13.7 202 703-916 37-242 (325)
375 COG3845 ABC-type uncharacteriz 100.0 2.3E-32 4.9E-37 308.3 19.8 216 677-914 4-223 (501)
376 cd03216 ABC_Carb_Monos_I This 100.0 2.5E-32 5.4E-37 282.8 18.7 158 678-911 1-162 (163)
377 cd03265 ABC_DrrA DrrA is the A 100.0 1.5E-32 3.2E-37 300.5 17.9 190 1-233 28-219 (220)
378 TIGR01192 chvA glucan exporter 100.0 2.2E-32 4.7E-37 340.9 21.7 212 676-916 333-554 (585)
379 TIGR02857 CydD thiol reductant 100.0 8.7E-33 1.9E-37 342.6 17.6 201 676-903 319-529 (529)
380 TIGR01288 nodI ATP-binding ABC 100.0 1.9E-32 4.1E-37 313.3 18.8 191 1-235 32-224 (303)
381 cd03250 ABCC_MRP_domain1 Domai 100.0 2.5E-32 5.5E-37 295.0 18.6 195 678-906 1-203 (204)
382 PRK10070 glycine betaine trans 100.0 2E-32 4.3E-37 319.2 18.9 191 1-234 56-253 (400)
383 cd03259 ABC_Carb_Solutes_like 100.0 2E-32 4.4E-37 298.0 17.6 185 1-228 28-213 (213)
384 KOG0059 Lipid exporter ABCA1 a 100.0 1.9E-30 4.1E-35 333.9 38.6 223 677-927 564-790 (885)
385 cd03294 ABC_Pro_Gly_Bertaine T 100.0 3E-32 6.6E-37 306.4 19.1 191 1-234 52-249 (269)
386 TIGR02204 MsbA_rel ABC transpo 100.0 1.7E-32 3.6E-37 344.3 18.7 213 676-915 336-558 (576)
387 cd03296 ABC_CysA_sulfate_impor 100.0 3.6E-32 7.8E-37 301.3 18.6 195 1-234 30-225 (239)
388 cd03290 ABCC_SUR1_N The SUR do 100.0 6.9E-32 1.5E-36 294.8 20.5 187 703-905 14-216 (218)
389 cd03228 ABCC_MRP_Like The MRP 100.0 2.9E-32 6.3E-37 285.3 16.8 166 679-906 2-170 (171)
390 TIGR03522 GldA_ABC_ATP gliding 100.0 2.8E-32 6E-37 311.4 18.0 190 1-235 30-221 (301)
391 COG4988 CydD ABC-type transpor 100.0 2.3E-32 4.9E-37 316.2 17.4 192 1-235 349-543 (559)
392 TIGR01187 potA spermidine/putr 100.0 3.8E-32 8.3E-37 312.7 19.2 184 721-916 1-186 (325)
393 cd03219 ABC_Mj1267_LivG_branch 100.0 3.3E-32 7.2E-37 301.5 18.0 200 1-234 28-231 (236)
394 PRK13637 cbiO cobalt transport 100.0 3.8E-32 8.3E-37 308.0 18.6 192 1-235 35-234 (287)
395 TIGR03415 ABC_choXWV_ATP choli 100.0 4.3E-32 9.3E-37 313.9 18.8 191 1-234 52-253 (382)
396 cd03237 ABC_RNaseL_inhibitor_d 100.0 1.1E-31 2.5E-36 296.2 21.4 200 705-929 9-216 (246)
397 TIGR00960 3a0501s02 Type II (G 100.0 2.4E-32 5.1E-37 298.2 15.7 180 1-224 31-216 (216)
398 cd03218 ABC_YhbG The ABC trans 100.0 4.8E-32 1E-36 299.3 18.2 189 1-233 28-220 (232)
399 COG4674 Uncharacterized ABC-ty 100.0 1.8E-32 3.9E-37 270.6 13.0 218 676-916 4-231 (249)
400 cd03258 ABC_MetN_methionine_tr 100.0 4.6E-32 1E-36 299.5 17.9 191 1-234 33-229 (233)
401 cd03293 ABC_NrtD_SsuB_transpor 100.0 5.8E-32 1.2E-36 295.9 18.4 185 1-230 32-218 (220)
402 PRK11144 modC molybdate transp 100.0 5.1E-32 1.1E-36 314.8 18.8 185 1-234 26-217 (352)
403 cd03269 ABC_putative_ATPase Th 100.0 4.5E-32 9.7E-37 294.6 16.7 183 1-228 28-210 (210)
404 cd03291 ABCC_CFTR1 The CFTR su 100.0 3.2E-31 6.8E-36 297.4 23.9 201 672-915 34-242 (282)
405 KOG0057 Mitochondrial Fe/S clu 100.0 2.9E-32 6.3E-37 309.2 15.5 191 2-235 381-574 (591)
406 cd03264 ABC_drug_resistance_li 100.0 4.8E-32 1.1E-36 294.6 16.7 183 1-228 27-211 (211)
407 PRK10522 multidrug transporter 100.0 7.6E-32 1.7E-36 334.4 20.7 207 676-913 321-531 (547)
408 PRK13643 cbiO cobalt transport 100.0 5E-32 1.1E-36 307.2 17.4 206 1-251 34-252 (288)
409 cd03260 ABC_PstB_phosphate_tra 100.0 4E-32 8.6E-37 298.8 16.1 189 1-232 28-226 (227)
410 TIGR01187 potA spermidine/putr 100.0 6.4E-32 1.4E-36 310.8 18.4 188 4-234 1-189 (325)
411 cd03301 ABC_MalK_N The N-termi 100.0 7.8E-32 1.7E-36 293.6 18.0 185 1-228 28-213 (213)
412 TIGR02142 modC_ABC molybdenum 100.0 8E-32 1.7E-36 313.8 19.2 189 1-234 25-220 (354)
413 cd03263 ABC_subfamily_A The AB 100.0 5.6E-32 1.2E-36 296.3 16.5 188 1-233 30-219 (220)
414 cd03256 ABC_PhnC_transporter A 100.0 9.9E-32 2.1E-36 298.8 18.4 199 1-234 29-233 (241)
415 cd03224 ABC_TM1139_LivF_branch 100.0 8.9E-32 1.9E-36 295.2 17.4 188 1-234 28-220 (222)
416 PRK11174 cysteine/glutathione 100.0 7.3E-32 1.6E-36 338.7 19.1 192 1-235 378-572 (588)
417 PRK15079 oligopeptide ABC tran 100.0 1.1E-31 2.4E-36 308.1 18.9 194 1-234 49-250 (331)
418 cd03266 ABC_NatA_sodium_export 100.0 6.3E-32 1.4E-36 295.4 16.0 184 1-228 33-218 (218)
419 PRK13634 cbiO cobalt transport 100.0 1.2E-31 2.6E-36 304.5 18.8 191 1-234 35-234 (290)
420 cd03295 ABC_OpuCA_Osmoprotecti 100.0 1.2E-31 2.6E-36 297.7 18.4 191 1-234 29-224 (242)
421 cd03226 ABC_cobalt_CbiO_domain 100.0 6.8E-32 1.5E-36 291.9 15.7 177 1-225 28-205 (205)
422 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 7.4E-32 1.6E-36 294.8 16.2 180 1-224 32-218 (218)
423 cd03268 ABC_BcrA_bacitracin_re 100.0 9.9E-32 2.2E-36 291.4 16.8 180 1-228 28-208 (208)
424 PRK10535 macrolide transporter 100.0 6.2E-31 1.3E-35 330.0 26.5 219 677-917 4-229 (648)
425 PRK09536 btuD corrinoid ABC tr 100.0 8.8E-32 1.9E-36 313.9 17.3 194 1-234 31-227 (402)
426 COG4559 ABC-type hemin transpo 100.0 9.7E-32 2.1E-36 269.5 14.6 193 1-235 29-230 (259)
427 PRK13647 cbiO cobalt transport 100.0 2E-31 4.4E-36 300.3 19.1 189 1-233 33-225 (274)
428 PRK13631 cbiO cobalt transport 100.0 1.5E-31 3.3E-36 306.0 18.1 189 1-234 54-264 (320)
429 PRK11831 putative ABC transpor 100.0 2.1E-31 4.5E-36 299.9 18.5 192 1-234 35-232 (269)
430 PRK11629 lolD lipoprotein tran 100.0 2.5E-31 5.4E-36 293.4 18.6 186 1-230 37-229 (233)
431 PRK15177 Vi polysaccharide exp 100.0 2.4E-31 5.1E-36 288.1 18.0 193 705-927 2-195 (213)
432 PRK13651 cobalt transporter AT 100.0 1.1E-31 2.4E-36 305.3 16.0 190 1-234 35-253 (305)
433 TIGR02315 ABC_phnC phosphonate 100.0 1.6E-31 3.5E-36 297.3 17.0 198 1-233 30-233 (243)
434 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 3.2E-31 7E-36 293.1 19.1 191 1-235 29-221 (236)
435 PRK13650 cbiO cobalt transport 100.0 2.9E-31 6.3E-36 299.8 18.8 190 1-234 35-228 (279)
436 TIGR02770 nickel_nikD nickel i 100.0 2.7E-31 5.8E-36 292.4 18.0 194 1-234 14-214 (230)
437 PRK11264 putative amino-acid A 100.0 2.5E-31 5.5E-36 297.0 18.0 190 1-234 31-232 (250)
438 PRK09473 oppD oligopeptide tra 100.0 3.1E-31 6.7E-36 304.7 18.9 199 1-235 44-251 (330)
439 TIGR01184 ntrCD nitrate transp 100.0 2.5E-31 5.5E-36 292.1 17.2 190 1-233 13-202 (230)
440 PRK13646 cbiO cobalt transport 100.0 1.9E-31 4.1E-36 302.5 16.7 190 1-234 35-234 (286)
441 PRK09493 glnQ glutamine ABC tr 100.0 2.6E-31 5.7E-36 294.8 17.5 190 1-234 29-224 (240)
442 TIGR01194 cyc_pep_trnsptr cycl 100.0 3.8E-31 8.3E-36 328.0 20.7 210 676-911 336-550 (555)
443 cd03297 ABC_ModC_molybdenum_tr 100.0 3.6E-31 7.9E-36 288.2 18.0 183 1-228 25-214 (214)
444 cd03298 ABC_ThiQ_thiamine_tran 100.0 2.7E-31 5.9E-36 288.7 16.9 185 1-228 26-211 (211)
445 cd03234 ABCG_White The White s 100.0 5.4E-31 1.2E-35 289.3 18.6 187 1-228 35-226 (226)
446 TIGR02673 FtsE cell division A 100.0 3E-31 6.4E-36 289.2 16.4 179 1-223 30-214 (214)
447 PRK15064 ABC transporter ATP-b 100.0 6.4E-31 1.4E-35 324.9 21.5 205 678-915 2-237 (530)
448 PRK13641 cbiO cobalt transport 100.0 3.1E-31 6.6E-36 300.9 17.1 190 1-234 35-233 (287)
449 PRK13635 cbiO cobalt transport 100.0 5.1E-31 1.1E-35 297.6 18.8 190 1-234 35-228 (279)
450 cd03292 ABC_FtsE_transporter F 100.0 2.9E-31 6.4E-36 289.4 16.2 180 1-224 29-214 (214)
451 PRK10895 lipopolysaccharide AB 100.0 3.8E-31 8.3E-36 293.7 17.3 191 1-234 31-225 (241)
452 PTZ00265 multidrug resistance 100.0 2.6E-31 5.7E-36 355.7 18.4 214 677-906 382-655 (1466)
453 PRK10771 thiQ thiamine transpo 100.0 6E-31 1.3E-35 290.1 18.0 191 1-234 27-218 (232)
454 PRK11022 dppD dipeptide transp 100.0 5.7E-31 1.2E-35 302.4 18.4 199 1-235 35-243 (326)
455 PRK11247 ssuB aliphatic sulfon 100.0 4.8E-31 1E-35 293.2 17.2 180 1-231 40-219 (257)
456 PRK11248 tauB taurine transpor 100.0 6.8E-31 1.5E-35 292.8 18.4 186 1-231 29-216 (255)
457 COG0444 DppD ABC-type dipeptid 100.0 6.6E-31 1.4E-35 285.3 17.4 199 1-234 33-242 (316)
458 cd03233 ABC_PDR_domain1 The pl 100.0 5.7E-31 1.2E-35 283.1 16.9 166 1-228 35-202 (202)
459 PRK11819 putative ABC transpor 100.0 1.4E-30 3E-35 322.7 22.8 206 677-915 6-245 (556)
460 TIGR00972 3a0107s01c2 phosphat 100.0 6.1E-31 1.3E-35 293.0 17.6 192 1-234 29-231 (247)
461 TIGR02211 LolD_lipo_ex lipopro 100.0 5.7E-31 1.2E-35 288.5 16.9 181 1-225 33-220 (221)
462 cd03257 ABC_NikE_OppD_transpor 100.0 8.1E-31 1.8E-35 289.0 17.8 187 1-228 33-228 (228)
463 PRK11308 dppF dipeptide transp 100.0 9.3E-31 2E-35 300.4 18.7 193 1-235 43-244 (327)
464 TIGR03410 urea_trans_UrtE urea 100.0 7.3E-31 1.6E-35 289.4 17.2 187 1-233 28-219 (230)
465 PRK14257 phosphate ABC transpo 100.0 7.7E-31 1.7E-35 301.0 18.0 196 1-234 110-312 (329)
466 COG1132 MdlB ABC-type multidru 100.0 4.2E-31 9.1E-36 329.8 17.2 193 1-235 357-552 (567)
467 PRK11614 livF leucine/isoleuci 100.0 6.9E-31 1.5E-35 290.8 17.0 188 1-234 33-225 (237)
468 PRK10908 cell division protein 100.0 7.6E-31 1.7E-35 287.4 17.0 181 1-225 30-216 (222)
469 TIGR01277 thiQ thiamine ABC tr 100.0 1.2E-30 2.5E-35 283.9 18.1 186 1-229 26-212 (213)
470 COG4136 ABC-type uncharacteriz 100.0 8.1E-31 1.8E-35 247.3 14.5 180 702-890 14-196 (213)
471 PRK13636 cbiO cobalt transport 100.0 6.7E-31 1.4E-35 297.5 16.8 192 1-235 34-231 (283)
472 PRK14247 phosphate ABC transpo 100.0 1.1E-30 2.4E-35 291.6 18.4 198 1-234 31-233 (250)
473 PRK10619 histidine/lysine/argi 100.0 1E-30 2.2E-35 292.8 18.0 191 1-234 33-240 (257)
474 TIGR03411 urea_trans_UrtD urea 100.0 1.1E-30 2.4E-35 290.4 18.0 197 1-234 30-230 (242)
475 PRK13652 cbiO cobalt transport 100.0 8.9E-31 1.9E-35 295.8 17.6 191 1-234 32-226 (277)
476 COG4608 AppF ABC-type oligopep 100.0 1.4E-30 3E-35 277.0 17.8 189 677-916 4-195 (268)
477 PRK13644 cbiO cobalt transport 100.0 8.1E-31 1.8E-35 295.4 17.1 189 1-234 30-223 (274)
478 PRK11300 livG leucine/isoleuci 100.0 1.2E-30 2.5E-35 292.6 18.0 206 1-234 33-242 (255)
479 PRK13648 cbiO cobalt transport 100.0 1.7E-30 3.7E-35 292.7 19.4 190 1-234 37-230 (269)
480 COG5265 ATM1 ABC-type transpor 100.0 1.9E-31 4.1E-36 292.6 11.2 216 673-915 258-481 (497)
481 PRK13638 cbiO cobalt transport 100.0 1.2E-30 2.5E-35 294.3 17.9 190 1-234 29-224 (271)
482 PRK13649 cbiO cobalt transport 100.0 1.5E-30 3.2E-35 295.2 18.9 190 1-234 35-233 (280)
483 PRK13548 hmuV hemin importer A 100.0 1.4E-30 3.1E-35 291.2 18.2 191 1-234 30-229 (258)
484 PRK13632 cbiO cobalt transport 100.0 1.1E-30 2.3E-35 294.4 17.4 190 1-234 37-230 (271)
485 TIGR03740 galliderm_ABC gallid 100.0 1.6E-30 3.4E-35 285.1 18.1 182 1-231 28-209 (223)
486 COG4181 Predicted ABC-type tra 100.0 1.2E-30 2.6E-35 252.0 15.0 181 2-226 39-226 (228)
487 cd03236 ABC_RNaseL_inhibitor_d 100.0 9.8E-31 2.1E-35 289.7 16.5 191 704-914 15-221 (255)
488 COG4161 ArtP ABC-type arginine 100.0 1.1E-30 2.4E-35 249.1 14.5 188 2-232 31-227 (242)
489 PRK14268 phosphate ABC transpo 100.0 1.3E-30 2.8E-35 292.0 17.7 195 1-234 40-241 (258)
490 cd03225 ABC_cobalt_CbiO_domain 100.0 8.5E-31 1.8E-35 285.0 15.6 179 1-223 29-211 (211)
491 PRK14273 phosphate ABC transpo 100.0 1.3E-30 2.9E-35 291.5 17.5 196 1-234 35-237 (254)
492 cd03299 ABC_ModC_like Archeal 100.0 1.9E-30 4.2E-35 286.3 18.5 191 1-234 27-218 (235)
493 PRK14242 phosphate transporter 100.0 1.3E-30 2.8E-35 291.7 17.3 196 1-234 34-236 (253)
494 PRK11124 artP arginine transpo 100.0 1.2E-30 2.5E-35 290.0 16.7 189 1-233 30-228 (242)
495 TIGR02769 nickel_nikE nickel i 100.0 2E-30 4.4E-35 291.4 18.8 192 1-234 39-239 (265)
496 COG1101 PhnK ABC-type uncharac 100.0 7.7E-31 1.7E-35 263.6 13.6 205 701-914 17-232 (263)
497 TIGR03719 ABC_ABC_ChvD ATP-bin 100.0 2.6E-30 5.7E-35 320.3 21.6 206 677-915 4-243 (552)
498 TIGR03005 ectoine_ehuA ectoine 100.0 1.8E-30 3.8E-35 290.2 18.1 191 1-234 28-235 (252)
499 COG4152 ABC-type uncharacteriz 100.0 8.8E-31 1.9E-35 268.0 14.1 192 1-237 30-221 (300)
500 COG4618 ArpD ABC-type protease 100.0 9.5E-31 2E-35 293.7 15.7 195 2-237 365-562 (580)
No 1
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=6.8e-198 Score=1796.24 Aligned_cols=1209 Identities=54% Similarity=0.919 Sum_probs=1108.2
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCccccceEEEeccccccCCCCCHHHHHHHHHhccCCCCc
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFVPQRTAAYISQHDVHIGEMTVRETLAFSARCQGVGSR 80 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~ 80 (1275)
|+.++||+||||||||++|+|..+......|+|.+||++.++...++.++|++|+|.|+|.+||||++.|+++|++++.|
T Consensus 143 m~lvLG~pgsG~ttllkal~g~~~~~~~~~~~isy~G~~~~e~~~~~~~aY~~e~DvH~p~lTVreTldFa~rck~~~~r 222 (1391)
T KOG0065|consen 143 MTLVLGPPGSGKTTLLKALAGKLDNFLKSSGEITYNGHDLKEFVPKKTVAYNSEQDVHFPELTVRETLDFAARCKGPGSR 222 (1391)
T ss_pred eEEEecCCCCchHHHHHHHhCCCcccccCCCceeECCCcccccccCceEEeccccccccceeEEeehhhHHHhccCCccc
Confidence 58999999999999999999999876566889999999999888889999999999999999999999999999999888
Q ss_pred chhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhhHHHHHh
Q 000808 81 YDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEMMV 160 (1275)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~al~ 160 (1275)
++ +..++++.. .+.|.+++.+||.+|+||.||++.+||+||||||||++|++++
T Consensus 223 ~~---~~~R~e~~~-----------------------~~~d~~lkilGL~~~~dT~VGnd~~RGvSGGerKRvsi~E~~v 276 (1391)
T KOG0065|consen 223 YD---EVSRREKLA-----------------------AMTDYLLKILGLDHCADTLVGNDMVRGVSGGERKRVSIGEMLV 276 (1391)
T ss_pred cc---cccHHHHHH-----------------------HHHHHHHHHhCchhhccceecccccccccCcccceeeeeeeee
Confidence 76 344443321 2578899999999999999999999999999999999999999
Q ss_pred cCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhhHHHHHHhC
Q 000808 161 GPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVLDFFESM 240 (1275)
Q Consensus 161 ~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~~~~~f~~~ 240 (1275)
++++++++||+|+|||+.++.++++.++++++..+.+.+++++|++++++++||+|++|++|+++|+||.+++++||+++
T Consensus 277 ~~~~~~~~De~t~GLDSsTal~iik~lr~~a~~~~~t~~vsi~Q~s~~~~~lFD~v~lL~eG~~iy~Gp~d~~~~yFe~~ 356 (1391)
T KOG0065|consen 277 GPASILFWDEITRGLDSSTAFQIIKALRQLAHITGATALVSILQPSPEIYDLFDDVILLSEGYQIYQGPRDEVLPYFEDM 356 (1391)
T ss_pred cCcceeeeecccccccHHHHHHHHHHHHHHHhhhcceEEEEeccCChHHHHhhhheeeeeccceEEeccHHHHHHHHHhc
Confidence 99999999999999999999999999999999988999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCChhhHHHhhcCchhhhhhhhccCCCCccCCHHHHHHHHhhchhhHHHHHhhcCCcccCCCCCcccccccccc
Q 000808 241 GFKCPERKGVADFLQEVTSRKDQQQYWVHKEMPYRFVTAQEFSEAFQSFTVGQKLADELRTPFDKCKSHPAALTTKMYGV 320 (1275)
Q Consensus 241 G~~~p~~~~~ad~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (1275)
||.||+++++|||++++++..++.++|.+...+....+..|+.+.+.+++.+.++..+++.+.++.+.++.+...+.|..
T Consensus 357 Gf~cP~r~~~ADfLt~vts~k~~~~~~~~~~~~~~~~~~~ef~~~~~~s~~~~~l~~~l~~~~~~~k~~~~al~s~~y~v 436 (1391)
T KOG0065|consen 357 GFKCPPRKGTADFLTEVTSKKDQEQYWNKRSKPYPYTSVSEFAEYFLNSEDYAKLKKELSKPYDKSKKHKAALVSSKYSV 436 (1391)
T ss_pred CccCCCccCHHHHHHHhhcCccccccccccCCCcccCCHHHHHHHHhcchhhHHHHHHhcchhhhhhccchhhcCCceec
Confidence 99999999999999999998888888888888887788899999999999999999999998888888888888999999
Q ss_pred CHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhccccCCCCCcCCccceehHHHHHHHHHHHhhhHHHHHH
Q 000808 321 GKKELLKANISRELLLMKRNSFVYIFKLTQLSSMALVSMTLFFRTKMHKDSVSDGGIYVGATFFAVMMTMFNGMSDISMT 400 (1275)
Q Consensus 321 ~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~~~~g~~f~~i~~~~~~~~~~~~~~ 400 (1275)
+.++|++.+..|.+..++||..++.++..+.++++++.|++|++.++ .+..+...+.|++||++++.++++++++..+
T Consensus 437 ~~~~qvk~c~~R~f~l~k~n~~~~~~~~~~~~i~ali~gslF~~~~~--~t~~~~~~~~~~lffsll~~~f~~laEi~~~ 514 (1391)
T KOG0065|consen 437 PYWEQVKACTIREFLLMKRNYFYYVFKTVQLVIQALITGSLFYRTPM--STTSGGYSRGGALFFALLFNLFNGLAEIALT 514 (1391)
T ss_pred cHHHHHHHHHHHHHHHHhCCceEEEhHHHHHHHHHHHHhhheeeccC--cccccchhhhhHHHHHHHHHHHHhHHHHHHH
Confidence 99999999999999999999999999999999999999999999884 4456677889999999999999999999999
Q ss_pred hhcchhHHHhhhcCCcchhHHHHHHHHHHhhHHHHHHHHHHhhhhhcccccCChhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000808 401 IAKLPVFYKQRDLRFYAAWAYALPAWILKIPISFLEVAVWVFLTYYVIGFDPNIGRLFKQFLLLLLVNQMASALFRFIAA 480 (1275)
Q Consensus 401 ~~~~~v~~~~r~~~~y~~~~y~l~~~i~~~p~~~~~~~~~~~i~Y~l~gl~~~~g~~~~~~l~~~l~~~~~~~l~~~i~~ 480 (1275)
++.+|+++|||+..+|.+|++.++.++.++|++++..++|.+|+||++|+.+++++||.+|+.+++.+++++++++++++
T Consensus 515 ~~~~pv~~Khr~~~fY~p~A~al~s~l~~~P~~~i~~~vf~iI~Yfl~gl~~~A~rFF~~fL~lf~~~~~~s~lFr~ia~ 594 (1391)
T KOG0065|consen 515 FQRLPVFYKHRDLSFYPPWAEALASTLLKIPSSFIESVVFVIITYFLIGLKRNAGRFFIQFLFLFLCQFCMSGLFRFIAS 594 (1391)
T ss_pred HhhcchHHHhhcccccChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCChHHHHHHHHHHHHHHHHhccccccCCCccchhhhhHhhCHHHHHHHHHHHhHcCCCccccccC------------C
Q 000808 481 AGRNMIVAMSFGSFVLLVLFAFGGFVLSRDDIKKWWVWGYWCSPMMYAQNAIVANEFFGHSWRKFTS------------N 548 (1275)
Q Consensus 481 ~~~~~~ia~~~~~~~~~~~~l~~gf~i~~~~i~~~~~w~~~~sp~~y~~~al~~~ef~~~~~~~~~~------------~ 548 (1275)
+++++.+|+.++++.++++.+++||+++..+||+||+|++|++|+.|++++++.|||+++.+.|.+. .
T Consensus 595 l~~t~~~An~~g~~~~L~i~m~~Gf~Ip~~~m~~W~~Wi~yinPl~Y~fesl~~NEF~~~~~~c~p~gp~y~n~~~~~~~ 674 (1391)
T KOG0065|consen 595 LSRTLSIANLIGGILLLVLFMYGGFVIPKKDMPPWFRWIAYINPLMYAFESLMSNEFHGRRWPCSPSGPAYDNISIENKV 674 (1391)
T ss_pred hcchHHHHhhHhHHHHHHHHHHcceeeeccccchHHHHHHHHCHHHHHHHHHHHhhhhcccCCCCCCCCccccccccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999988732 1
Q ss_pred ---CcccchHHHhhhcCcc-----cCCcchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCCcceeccCCcccccCCcCCC
Q 000808 549 ---SNETLGVQVLKSRGFF-----PHAYWYWLGLGATIGFVLLFNIGFTLSLTFLNQFEKPRAVISDESESNDLGNRIGG 620 (1275)
Q Consensus 549 ---~~~~~g~~~l~~~~~~-----~~~~~~w~~~~~~~~~~~~~~i~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 620 (1275)
.....|.+++...++. ....|+|+++++++|+.++|++++.+++.+++...+.+.+........+.....
T Consensus 675 c~~~~~~~G~~~v~g~~~l~~~~~y~~~~~Wr~~gillgf~v~f~~~~~ia~~yl~p~~~~~~~l~~~~~~~~~~~~~-- 752 (1391)
T KOG0065|consen 675 CAATGATLGNDYVSGRDYLKVQYQYEYKWYWRNFGILLGFTVFFNFVFLIALEYLKPLKKSGAILVFKKGKEKKKVKS-- 752 (1391)
T ss_pred chhhccccCceEEecccccccccccccceeEeehhHHHHHHHHHHHHHHHHHHhcCccccccceeeeccchhhhcchh--
Confidence 1355688888887776 677899999999999999999999999999998877766554332111100000
Q ss_pred CcccccCCCCCCCCCCCCcccccccchhhhhcccccccccccCccCCCcccCCCCcEEEEEeEEEEEeccchhhhccccc
Q 000808 621 TAQLSTHGSNSSHKTCSESEDITVKDSFSQLLSQREVTVGAIQPKKRGMVLPFEPHSLTFDEVTYSVDMPKEMKLQGILE 700 (1275)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 700 (1275)
+... .. . .... ......+.++..|..+..++++||.+-++++-+.+.++
T Consensus 753 ---------~~~~------~~---~----~~~~------~s~~~~~~~~~~~~~~~~~~~~~V~~w~dl~~~~~~qG--- 801 (1391)
T KOG0065|consen 753 ---------AGSS------SE---I----EKLD------DSSHQEKNKMVLPFTPLSLTFKDVFYWVDLPYEMPIQG--- 801 (1391)
T ss_pred ---------cccc------cc---c----cccc------cccccccccccCCCccccccccceEEEEeCCccccccc---
Confidence 0000 00 0 0000 00001234555666677888888888877776555443
Q ss_pred cccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCCcccccceEEEeccCCCCCCCCCH
Q 000808 701 DKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQETFTRISGYCEQNDIHSPFVTV 780 (1275)
Q Consensus 701 ~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~~~~~~~~~~v~q~~~~~~~ltv 780 (1275)
+++++|+|||+.++||.++||||+||||||||||+|+||...|.++|+|.+||.|.++..++|.+|||.|+|.|.+.+||
T Consensus 802 ~~~qLL~~V~G~~kPG~LTALMG~SGAGKTTLLdvLA~R~t~G~I~Gdi~i~G~p~~q~tF~R~~GYvqQ~DiH~~~~TV 881 (1391)
T KOG0065|consen 802 GTRQLLNNVSGAFKPGVLTALMGESGAGKTTLLDVLAGRKTGGYIEGDILISGFPKDQETFARVSGYVEQQDIHSPELTV 881 (1391)
T ss_pred cceEhhhcCceEecCCceeehhcCCCCchHHHHHHHhcCcccceEEeEEEECCeeCchhhhccccceeecccccCcccch
Confidence 67889999999999999999999999999999999999999999999999999999878899999999999999999999
Q ss_pred HHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCC-cEEEEeCCCCC
Q 000808 781 YESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKRLTIAVELVANP-SIIFMDEPTSG 859 (1275)
Q Consensus 781 ~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~~l~~~p-~illlDEPtsg 859 (1275)
||.|.|+|.||+|.+.+.+++.+.|+++++.|+|.+++|.+||.++ +|||.+||||++||.+|+.|| .||||||||||
T Consensus 882 rESL~fSA~LRlp~~v~~~ek~~yVe~Vi~lleL~~~~daiVG~~G-~GLs~eQRKrLTIgVELvA~P~~ilFLDEPTSG 960 (1391)
T KOG0065|consen 882 RESLRFSAALRLPKEVSDEEKYEYVEEVIELLELKEYADALVGLPG-SGLSTEQRKRLTIGVELVANPSSILFLDEPTSG 960 (1391)
T ss_pred HHHHHHHHHHcCCCcCCHHHHHHHHHHHHHHhCchhhhhhhccCCC-CCCCHHHhceeeEEEEEecCCceeEEecCCCCC
Confidence 9999999999999999999999999999999999999999999999 899999999999999999999 89999999999
Q ss_pred CCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcEEEEECCCCccchHHHHHHhcCCCcccCCCCC
Q 000808 860 LDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVGPLGRHSCHLIRYFEGIPGVENIKDGY 939 (1275)
Q Consensus 860 LD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~~~~~~~~~~~f~~~~~~~~~~~~~ 939 (1275)
||+.++..|++++|+++++|+||+||+||||.++++.||++++|++||++||+||.+++++.+++||+++++. +|++..
T Consensus 961 LDsqaA~~i~~~lrkla~tGqtIlCTIHQPS~~ife~FD~LLLLkrGGqtVY~G~lG~~s~~li~YFes~~~~-~~~~~~ 1039 (1391)
T KOG0065|consen 961 LDSQAAAIVMRFLRKLADTGQTILCTIHQPSIDIFEAFDELLLLKRGGQTVYFGPLGENSSKLIEYFESIGGV-KCISDE 1039 (1391)
T ss_pred ccHHHHHHHHHHHHHHHhcCCeEEEEecCCcHHHHHHHhHHHHHhcCCeEEEecCcccccHHHHHHHHhcCCc-cCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999886 577667
Q ss_pred CCccchhhhccccccchhhhhHHHHhhccHHHHHHHHHHHHhcCCCCC-CCCCCCCCCCCCcHHHHHHHHHHHHHHHhhc
Q 000808 940 NPATWMLEVTAKSQELTLEIDFTDIYKGSELYRRNKALIEELSRPAPG-SKDLYFPTHYTQSFFMQCVACLWKQHWSYWR 1018 (1275)
Q Consensus 940 npad~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~q~~~l~~R~~~~~~R 1018 (1275)
|||||++|+++...+.....||++.|++|++++++++.+++++.+.++ ..+..++++|++|+|.|++.++||+++.+||
T Consensus 1040 NPA~~mLevi~~~~~~~~~~D~a~~w~~S~e~k~~~e~v~~l~~~~~~~~~~~~~~~~fa~s~~~Q~k~~l~Rq~~syWR 1119 (1391)
T KOG0065|consen 1040 NPAEWMLEVIGAGAEASLSVDFAEIWKNSEEYKRNKELVKELSQPPPGFSTDLEFKTRFAQSLWYQFKLCLWRQFLSYWR 1119 (1391)
T ss_pred ChHHHHHhhcccccccccCccHHHHHhccHHHHHHHHHHHHHhcCCccCCcccccccccchhHHHHHHHHHHHHHHHHhC
Confidence 999999999998877777889999999999999999999999998887 6667777889999999999999999999999
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCchhhHHHHHhHHHHHHHHHHHHHhhhhhhhHHHhhHHHHhHccCCCCCh
Q 000808 1019 NPPYTAVRFLFTTVIALTFGTMFWDMGTKMKRNQDLFNAMGSMYTAVFFLGAQYCSSVQPVVAVERAVFCREKGAGMYSA 1098 (1275)
Q Consensus 1019 ~~~~~~~~~~~~~~~~l~~g~~f~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~~~~~er~v~~rE~~~~~Y~~ 1098 (1275)
+|.++++|++..++.|+++|++||++|+ +.++++|.+|++|+++++.+..+.....+.+..||.+++||+++|+||+
T Consensus 1120 sp~y~~ar~~~~i~~gl~iGf~F~~~g~---~~q~lqn~m~a~yma~v~~~~~~~~~~~~~v~~e~~y~~RE~~s~mYs~ 1196 (1391)
T KOG0065|consen 1120 SPDYLMARFALTIVAGLFIGFTFWKVGH---NVQGLQNAMGAAYMATVFSGPNNNQLQQPAVATERLYEYRERASNMYSW 1196 (1391)
T ss_pred CcHHHHHHHHHHHHHHHhheeeeeecCC---cHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHhhhhhheeeecccCcccH
Confidence 9999999999999999999999999995 5889999999999999999887776677778889999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 000808 1099 MPYAFAQVMIEIPYIFVLSSVYGIIVYAMIGFEWIAAKFFWYLFFMFFSLLYFTFYGMMTVAMTPNHHIAAIVSILFYGL 1178 (1275)
Q Consensus 1099 ~~y~~a~~~~~~p~~~~~~~~~~~i~Y~~~gl~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 1178 (1275)
.+|++|++++|+|+.++++++|.+|+|+++||.+++.+|++|++.+++..++.+.+|+|+.+++||.++|++++++++++
T Consensus 1197 ~~~~~aq~~vEiP~~l~~stl~~~~~Y~~iGF~~~a~~~~~f~~~~~~f~lYf~~~Gmm~~s~tPn~~~Aav~~s~~~s~ 1276 (1391)
T KOG0065|consen 1197 TPFALAQVLVEIPYNLLQSTLFFLITYYPIGFYWTASKFFWFLLFMFIFFLYFTTLGMMLVSLTPNLQTAAVIASLFFSF 1276 (1391)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhheeeeeeccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCcCCCCccchhhHHhhhchHHHHHHHHHHHhhCCcccccC----------CCCcHHHHHHhhcC----CCCcc
Q 000808 1179 WNVFSGFVIPRTRIPLWWRWYYWANPVAWTMYGLVASQFGDVEDKME----------SGETVKQFVRSYFD----FKHDF 1244 (1275)
Q Consensus 1179 ~~l~~G~~i~~~~ip~~~~w~~~~sp~~y~~~~l~~~~f~~~~~~~~----------~~~~~~~~~~~~~~----~~~~~ 1244 (1275)
+.+||||++|++.||.||+|+||+||++|.+++++..+++|.+..|. +|.++++|+.+++| +.++.
T Consensus 1277 ~~~F~G~l~p~~~iP~fW~wmy~lsP~ty~l~gli~~~~~d~~v~c~~~e~~~~~pp~g~tcge~m~~~~~~~~Gy~~n~ 1356 (1391)
T KOG0065|consen 1277 WNLFSGFLQPRSLIPKFWIWMYYLSPVTYTLEGLISSQLGDVEVTCEDSEMNYFDPPSGQTCGEFMEDFFGEGTGYLHNP 1356 (1391)
T ss_pred HHHhcccccccccccceeeeeeecCcHHHHHHHHHHHHhCCCceeeecCCccccCCCCCcCHHHHHHHHhccCcceeccC
Confidence 99999999999999999999999999999999999999999998884 34489999999999 87777
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhcccccC
Q 000808 1245 LGVVAVVVAAFAVLFGVLFAVGIKRFNFQNR 1275 (1275)
Q Consensus 1245 ~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~r 1275 (1275)
.....++.+++.+++.++..+.++|.|+++|
T Consensus 1357 ~a~~~c~~c~y~v~~~~l~~f~~~y~~~wrn 1387 (1391)
T KOG0065|consen 1357 LATTACVYCAYTVADAFLAAFNIKYLNFWRN 1387 (1391)
T ss_pred cceeEEEEeeeehHHHHHHHHHHHHHHHHHh
Confidence 7777888889999999999999999999886
No 2
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=1.6e-190 Score=1868.03 Aligned_cols=1272 Identities=61% Similarity=1.070 Sum_probs=1086.1
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCccccceEEEeccccccCCCCCHHHHHHHHHhccCCCCc
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFVPQRTAAYISQHDVHIGEMTVRETLAFSARCQGVGSR 80 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~ 80 (1275)
+++|+|||||||||||++|+|+++|+.+.+|+|.+||+++++...++.++||+|+|.+++++||+||+.|++++++.+.+
T Consensus 193 ~~~llGpnGSGKSTLLk~LaG~l~~~~~~~G~I~~nG~~~~~~~~~~~i~yv~Q~d~~~~~lTV~EtL~f~a~~~~~~~~ 272 (1470)
T PLN03140 193 MTLLLGPPSSGKTTLLLALAGKLDPSLKVSGEITYNGYRLNEFVPRKTSAYISQNDVHVGVMTVKETLDFSARCQGVGTR 272 (1470)
T ss_pred EEEEEcCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEechhhcccceeEEecccccCCCcCcHHHHHHHHHHhcCCCCc
Confidence 58999999999999999999999886567999999999887665677899999999999999999999999998876555
Q ss_pred chhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhhHHHHHh
Q 000808 81 YDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEMMV 160 (1275)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~al~ 160 (1275)
++...+..+++++....++.+.+.+++++..+..+.+..++.+++.+||+++.||.||++.+++|||||||||+||++|+
T Consensus 273 ~~~~~~~~~~ek~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~L~~lGL~~~~~t~vg~~~~rglSGGerkRVsia~aL~ 352 (1470)
T PLN03140 273 YDLLSELARREKDAGIFPEAEVDLFMKATAMEGVKSSLITDYTLKILGLDICKDTIVGDEMIRGISGGQKKRVTTGEMIV 352 (1470)
T ss_pred ccchhhcCHHHHhccCCCchhhHHHHHHhhhhcchhhHHHHHHHHHcCCccccCceeCCccccCCCcccceeeeehhhhc
Confidence 44433444555544444445555555555555555566788999999999999999999999999999999999999999
Q ss_pred cCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhhHHHHHHhC
Q 000808 161 GPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVLDFFESM 240 (1275)
Q Consensus 161 ~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~~~~~f~~~ 240 (1275)
++|+++||||||+|||+.++.++++.|+++++..+.|+|+++||+.++++++||+|++|++|+++|+|+.+++.+||+++
T Consensus 353 ~~p~vlllDEPTsGLDs~t~~~i~~~Lr~la~~~g~Tviis~Hqp~~~i~~lfD~vilL~~G~ivy~G~~~~~~~yF~~l 432 (1470)
T PLN03140 353 GPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHLTEATVLMSLLQPAPETFDLFDDIILLSEGQIVYQGPRDHILEFFESC 432 (1470)
T ss_pred CCCcEEEEeCCCcCccHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHHhheEEEeeCceEEEeCCHHHHHHHHHHc
Confidence 99999999999999999999999999999877556788888889999999999999999999999999999999999999
Q ss_pred CCCCCCCCChhhHHHhhcCchhhhhhhhccCCCCccCCHHHHHHHHhhchhhHHHHHhhcCCcccCCCCCcccccccccc
Q 000808 241 GFKCPERKGVADFLQEVTSRKDQQQYWVHKEMPYRFVTAQEFSEAFQSFTVGQKLADELRTPFDKCKSHPAALTTKMYGV 320 (1275)
Q Consensus 241 G~~~p~~~~~ad~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (1275)
||+||++.|+|||++++++..+++++|.....|.+..+.+++.+.|+++..+++..+++..+.++...++.....+.+..
T Consensus 433 Gf~cP~~~n~ADFl~~v~s~~~~~~~~~~~~~p~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~ 512 (1470)
T PLN03140 433 GFKCPERKGTADFLQEVTSKKDQEQYWADRNKPYRYISVSEFAERFKSFHVGMQLENELSVPFDKSQSHKAALVFSKYSV 512 (1470)
T ss_pred CCCCCCCCChHHHHHHhcCchhhhhhhhccCCccccCCHHHHHHHHHhcHHHHHHHHHHhhhhhhhhcccccccCCCCcC
Confidence 99999999999999999988766566544445555578899999999988877766665544433333333334456888
Q ss_pred CHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhccccCCCCCcCCccceehHHHHHHHHHHHhhhHHHHHH
Q 000808 321 GKKELLKANISRELLLMKRNSFVYIFKLTQLSSMALVSMTLFFRTKMHKDSVSDGGIYVGATFFAVMMTMFNGMSDISMT 400 (1275)
Q Consensus 321 ~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~~~~g~~f~~i~~~~~~~~~~~~~~ 400 (1275)
+.++|++.+++|+++.++||+..+..+.++.+++++++|++|++.+.+.....++..+.|++||++++.++++++.+..+
T Consensus 513 s~~~q~~~~~~R~~~~~~Rd~~~~~~r~~~~ii~ali~GsvF~~~~~~~~~~~~~~~~~g~lff~~l~~~~~~~~~l~~~ 592 (1470)
T PLN03140 513 PKMELLKACWDKEWLLMKRNAFVYVFKTVQIIIVAAIASTVFLRTEMHTRNEEDGALYIGALLFSMIINMFNGFAELALM 592 (1470)
T ss_pred CHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999876544444556778999999999999999999999
Q ss_pred hhcchhHHHhhhcCCcchhHHHHHHHHHHhhHHHHHHHHHHhhhhhcccccCChhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000808 401 IAKLPVFYKQRDLRFYAAWAYALPAWILKIPISFLEVAVWVFLTYYVIGFDPNIGRLFKQFLLLLLVNQMASALFRFIAA 480 (1275)
Q Consensus 401 ~~~~~v~~~~r~~~~y~~~~y~l~~~i~~~p~~~~~~~~~~~i~Y~l~gl~~~~g~~~~~~l~~~l~~~~~~~l~~~i~~ 480 (1275)
+.++|+|+|||+.++|++++|++++++.++|+.++++++|++++|||+||++++++||.++++.++..++++++++++++
T Consensus 593 ~~~r~vf~ker~~~~Y~~~ay~la~~l~~iP~~~i~~~if~~I~Y~m~Gl~~~~~~Ff~f~l~~~l~~~~~~~l~~~i~a 672 (1470)
T PLN03140 593 IQRLPVFYKQRDLLFHPPWTFTLPTFLLGIPISIIESVVWVVITYYSIGFAPEASRFFKQLLLVFLIQQMAAGIFRLIAS 672 (1470)
T ss_pred HhccchhHHhhhccCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCChHHHHHHHHHHHHHHHHhccccccCCCccchhhhhHhhCHHHHHHHHHHHhHcCCCccccc-cCCCcccchHHHhh
Q 000808 481 AGRNMIVAMSFGSFVLLVLFAFGGFVLSRDDIKKWWVWGYWCSPMMYAQNAIVANEFFGHSWRKF-TSNSNETLGVQVLK 559 (1275)
Q Consensus 481 ~~~~~~ia~~~~~~~~~~~~l~~gf~i~~~~i~~~~~w~~~~sp~~y~~~al~~~ef~~~~~~~~-~~~~~~~~g~~~l~ 559 (1275)
+++++.+|+.+++++++++++|+||+++.++||.||+|++|+||+.|++++++.|||.+..+.+. +.......|.++|.
T Consensus 673 ~~~~~~~A~~~~~~~~l~~~lf~Gf~i~~~~ip~w~~W~~yisp~~Ya~eal~~NEf~~~~~~~~~~~~~~~~~G~~~L~ 752 (1470)
T PLN03140 673 VCRTMIIANTGGALVLLLVFLLGGFILPKGEIPNWWEWAYWVSPLSYGFNALAVNEMFAPRWMNKMASDNSTRLGTAVLN 752 (1470)
T ss_pred HcCcHHHHHHHHHHHHHHHHHHccceechHhCchHHHHHHHhCHHHHHHHHHHHHhccCccccCcccCCCCcccHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999988776532 22234567999999
Q ss_pred hcCcccCCcchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCCcceeccCCcccccCCcCCCCcccccCCCCCCCCCCCCc
Q 000808 560 SRGFFPHAYWYWLGLGATIGFVLLFNIGFTLSLTFLNQFEKPRAVISDESESNDLGNRIGGTAQLSTHGSNSSHKTCSES 639 (1275)
Q Consensus 560 ~~~~~~~~~~~w~~~~~~~~~~~~~~i~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 639 (1275)
.+++...+.|+|.+++++++++++|.+++++++++.+................................... .......
T Consensus 753 ~~g~~~~~~~~w~~~~iL~~~~v~f~~l~~l~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 831 (1470)
T PLN03140 753 IFDVFTDKNWYWIGVGALLGFTILFNVLFTLALTYLNPLGKKQAIISEETAEEMEGEEDSIPRSLSSADGNN-TREVAIQ 831 (1470)
T ss_pred hcCcCccccchhhhHHHHHHHHHHHHHHHHHHHHhcCccCCCCccccccchhhhhccccccccccccccccc-ccccccc
Confidence 999998888999999999999999999999999998755444333211100000000000000000000000 0000000
Q ss_pred ccccccchhhhhcccccccccccCccCCCcccCCCCcEEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEE
Q 000808 640 EDITVKDSFSQLLSQREVTVGAIQPKKRGMVLPFEPHSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLT 719 (1275)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ 719 (1275)
... ..+.... ..............+.++..|..|..++|+|++|.++.+.+.+..+...+++.+|+|||++++|||++
T Consensus 832 ~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~y~v~~~~~~~~~~~~~~~~~iL~~vs~~i~~Gel~ 909 (1470)
T PLN03140 832 RMS-NPEGLSK-NRDSSLEAANGVAPKRGMVLPFTPLAMSFDDVNYFVDMPAEMKEQGVTEDRLQLLREVTGAFRPGVLT 909 (1470)
T ss_pred ccc-ccccccc-ccccccccccccccccccccCCCcceEEEEEEEEEEccCccccccccCcCCceEeeCcEEEEECCeEE
Confidence 000 0000000 00000000000112234456777889999999999987654333333345567999999999999999
Q ss_pred EEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCCcccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHH
Q 000808 720 ALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSE 799 (1275)
Q Consensus 720 ~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~ 799 (1275)
||+||||||||||||+|+|+.+++..+|+|.+||.+.....+++.+|||+|+|.+++.+||+|++.|++.++.+...+.+
T Consensus 910 aL~G~sGaGKTTLL~~LaG~~~~g~~~G~I~inG~~~~~~~~~~~igyv~Q~d~~~~~lTV~E~L~~~a~lr~~~~~~~~ 989 (1470)
T PLN03140 910 ALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQETFARISGYCEQNDIHSPQVTVRESLIYSAFLRLPKEVSKE 989 (1470)
T ss_pred EEECCCCCCHHHHHHHHcCCCCCCcccceEEECCccCChHHhhhheEEEccccccCCCCcHHHHHHHHHHhCCCCCCCHH
Confidence 99999999999999999999876678999999998865445567799999999999999999999999988876666666
Q ss_pred HHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCC
Q 000808 800 TQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTG 879 (1275)
Q Consensus 800 ~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g 879 (1275)
+++++++++++.+||.+++|+.+|.++.++|||||||||+||++|+.+|++|||||||||||+.++..+++.|++++++|
T Consensus 990 ~~~~~v~~vl~~lgL~~~~~~~vg~~~~~~LSgGerkRvsIa~aL~~~P~lL~LDEPTsgLD~~~a~~v~~~L~~l~~~g 1069 (1470)
T PLN03140 990 EKMMFVDEVMELVELDNLKDAIVGLPGVTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTG 1069 (1470)
T ss_pred HHHHHHHHHHHHCCChhHhCCccCCCCCCCcCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCC
Confidence 67788999999999999999999988778999999999999999999999999999999999999999999999998889
Q ss_pred CEEEEEecCCCHHHHHhhhhhheeecCcEEEEECCCCccchHHHHHHhcCCCcccCCCCCCCccchhhhccccccchhhh
Q 000808 880 RTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVGPLGRHSCHLIRYFEGIPGVENIKDGYNPATWMLEVTAKSQELTLEI 959 (1275)
Q Consensus 880 ~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~~~~~~~~~~~f~~~~~~~~~~~~~npad~~~~~~~~~~~~~~~~ 959 (1275)
+|||+++|||+.++++.||++++|++||+++|+||.+++++++++||+++++.+.||+++|||||++|+++...+.....
T Consensus 1070 ~tVI~t~Hq~~~~i~~~~D~vllL~~gG~~v~~G~~~~~~~~~~~yF~~~~g~~~~p~~~NPAd~~l~v~~~~~~~~~~~ 1149 (1470)
T PLN03140 1070 RTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYSGPLGRNSHKIIEYFEAIPGVPKIKEKYNPATWMLEVSSLAAEVKLGI 1149 (1470)
T ss_pred CEEEEEeCCCCHHHHHhCCEEEEEcCCCEEEEECCcccccccHHHHHHhcCCCCCCCCCCCchhhhhhhhcccccccccc
Confidence 99999999999778999999999998899999999988888999999998776679999999999999987655544456
Q ss_pred hHHHHhhccHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHH
Q 000808 960 DFTDIYKGSELYRRNKALIEELSRPAPGSKDLYFPTHYTQSFFMQCVACLWKQHWSYWRNPPYTAVRFLFTTVIALTFGT 1039 (1275)
Q Consensus 960 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~l~~R~~~~~~R~~~~~~~~~~~~~~~~l~~g~ 1039 (1275)
|+++.|+.|+.+++.++.++++..+.+..++..++++|++++|+|++.|++|+++++||||.++.+|+++++++|+++|+
T Consensus 1150 d~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~l~~R~~~~~~R~p~~~~~r~~~~i~~al~~G~ 1229 (1470)
T PLN03140 1150 DFAEHYKSSSLYQRNKALVKELSTPPPGASDLYFATQYSQSTWGQFKSCLWKQWWTYWRSPDYNLVRFFFTLAAALMVGT 1229 (1470)
T ss_pred hHHHHHhccHHHHHHHHHHHHhccCCCCccccccCccccCCHHHHHHHHHHHHHHHHHCCHhHHHHHHHHHHHHHHHHHH
Confidence 89999999999988877777776655444444455678999999999999999999999999999999999999999999
Q ss_pred HhcCCCCCCCchhhHHHHHhHHHHHHHHHHHHHhhhhhhhHHHhhHHHHhHccCCCCChHHHHHHHHHHHHHHHHHHHHH
Q 000808 1040 MFWDMGTKMKRNQDLFNAMGSMYTAVFFLGAQYCSSVQPVVAVERAVFCREKGAGMYSAMPYAFAQVMIEIPYIFVLSSV 1119 (1275)
Q Consensus 1040 ~f~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~~~~~er~v~~rE~~~~~Y~~~~y~~a~~~~~~p~~~~~~~~ 1119 (1275)
+||+++++..+.+++++++|++|++++++++.++++++|.|..||++|+||+++|+|++.+|++|++++|+|+.++.+++
T Consensus 1230 ~f~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~p~~~~eR~vf~REr~~~~Y~~~~y~la~~l~eiP~~~~~~~i 1309 (1470)
T PLN03140 1230 IFWKVGTKRSNANDLTMVIGAMYAAVLFVGINNCSTVQPMVAVERTVFYRERAAGMYSALPYAIAQVVCEIPYVLIQTTY 1309 (1470)
T ss_pred HhhCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999987767789999999999999999998888899999999999999999999999999999999999999999999
Q ss_pred HhhhhhccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCcCCCCccchhhHH
Q 000808 1120 YGIIVYAMIGFEWIAAKFFWYLFFMFFSLLYFTFYGMMTVAMTPNHHIAAIVSILFYGLWNVFSGFVIPRTRIPLWWRWY 1199 (1275)
Q Consensus 1120 ~~~i~Y~~~gl~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~l~~G~~i~~~~ip~~~~w~ 1199 (1275)
|++|+|||+||++++++||+|+++++++.++++++|+++++++|+.++|..+++++++++++|+||++|+++||+||+|+
T Consensus 1310 f~~i~Y~m~Gl~~~~~~f~~~~~~~~l~~~~~~~~g~~~~a~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~iP~~~~W~ 1389 (1470)
T PLN03140 1310 YTLIVYAMVAFEWTAAKFFWFYFISFFSFLYFTYYGMMTVSLTPNQQVAAIFAAAFYGLFNLFSGFFIPRPKIPKWWVWY 1389 (1470)
T ss_pred HHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcHHHHHHHHHHHHHHHHHHeeeccChHHCchHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhchHHHHHHHHHHHhhCCcccccC--C---CCcHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhccccc
Q 000808 1200 YWANPVAWTMYGLVASQFGDVEDKME--S---GETVKQFVRSYFDFKHDFLGVVAVVVAAFAVLFGVLFAVGIKRFNFQN 1274 (1275)
Q Consensus 1200 ~~~sp~~y~~~~l~~~~f~~~~~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~ 1274 (1275)
+|+||++|+++|++.|||+|.+..|+ . ++++.+|+++.|||+++++|++++++++|+++|+++.+++++++||||
T Consensus 1390 ~~isp~~y~~~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~il~~~~~~f~~~~~~~~~~~~~q~ 1469 (1470)
T PLN03140 1390 YWICPVAWTVYGLIVSQYGDVEDTIKVPGGAPDPTIKWYIQDHYGYDPDFMGPVAAVLVGFTVFFAFIFAFCIRTLNFQT 1469 (1470)
T ss_pred HHcCHHHHHHhhhHHHHhCCCCCcccCCCCCCCCcHHHHHHHhcCcCcccccchhhhHHHHHHHHHHHHHHHHHHhhccc
Confidence 99999999999999999999887654 2 246789999999999999999999999999999999999999999999
Q ss_pred C
Q 000808 1275 R 1275 (1275)
Q Consensus 1275 r 1275 (1275)
|
T Consensus 1470 r 1470 (1470)
T PLN03140 1470 R 1470 (1470)
T ss_pred C
Confidence 8
No 3
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=1.2e-167 Score=1661.94 Aligned_cols=1207 Identities=31% Similarity=0.539 Sum_probs=981.6
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCC-CceeEEEEECCccCCCc--cccceEEEeccccccCCCCCHHHHHHHHHhccCC
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSK-LKFSGRVTYNGHGMDEF--VPQRTAAYISQHDVHIGEMTVRETLAFSARCQGV 77 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~-~~~~G~v~~~g~~~~~~--~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~ 77 (1275)
+++|+||||||||||||+|+|+.++. ...+|+|.+||+++++. ..++.++||+|+|.+++.+||+||+.|+++++.+
T Consensus 89 ~~aIlG~nGsGKSTLLk~LaG~~~~~~~~~~G~I~~~G~~~~~~~~~~r~~i~yv~Q~d~~~~~lTV~E~l~f~~~~~~~ 168 (1394)
T TIGR00956 89 LTVVLGRPGSGCSTLLKTIASNTDGFHIGVEGVITYDGITPEEIKKHYRGDVVYNAETDVHFPHLTVGETLDFAARCKTP 168 (1394)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCCCCCceeEEEECCEehHHHHhhcCceeEEeccccccCCCCCHHHHHHHHHHhCCC
Confidence 58999999999999999999997421 12599999999887532 2345699999999999999999999999876542
Q ss_pred CCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhhHHH
Q 000808 78 GSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGE 157 (1275)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~ 157 (1275)
..+.+ ...+.+ ..+..++.+++.+||+++.||.||++.+++|||||||||+||+
T Consensus 169 ~~~~~---~~~~~~-----------------------~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGerkRvsIA~ 222 (1394)
T TIGR00956 169 QNRPD---GVSREE-----------------------YAKHIADVYMATYGLSHTRNTKVGNDFVRGVSGGERKRVSIAE 222 (1394)
T ss_pred CCCCC---CCCHHH-----------------------HHHHHHHHHHHHcCcccccCceeCCCcCCCCCcccchHHHHHH
Confidence 21100 000000 0112346689999999999999999999999999999999999
Q ss_pred HHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhhHHHHH
Q 000808 158 MMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVLDFF 237 (1275)
Q Consensus 158 al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~~~~~f 237 (1275)
+|+.+|++++|||||+|||+.++.++++.|+++++..+.++|+++||+++++.++||+|++|++|+++++|+++++.+||
T Consensus 223 aL~~~p~vlllDEPTsgLD~~~~~~i~~~L~~la~~~g~tvii~~Hq~~~~i~~l~D~v~~L~~G~iv~~G~~~~~~~yF 302 (1394)
T TIGR00956 223 ASLGGAKIQCWDNATRGLDSATALEFIRALKTSANILDTTPLVAIYQCSQDAYELFDKVIVLYEGYQIYFGPADKAKQYF 302 (1394)
T ss_pred HHHhCCCEEEEeCCCCCcCHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhhceEEEEeCCeEEEECCHHHHHHHH
Confidence 99999999999999999999999999999999876556788888888899999999999999999999999999999999
Q ss_pred HhCCCCCCCCCChhhHHHhhcCchhhhhhhhccCCCCccCCHHHHHHHHhhchhhHHHHHhhcCCcccC-----------
Q 000808 238 ESMGFKCPERKGVADFLQEVTSRKDQQQYWVHKEMPYRFVTAQEFSEAFQSFTVGQKLADELRTPFDKC----------- 306 (1275)
Q Consensus 238 ~~~G~~~p~~~~~ad~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 306 (1275)
+++||+||++.|++||+.++++..++. .+.. .......+.+++.+.|++++.+++..++.+...+..
T Consensus 303 ~~lG~~~p~~~n~aDfl~~~~~~~~~~-~~~~-~e~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (1394)
T TIGR00956 303 EKMGFKCPDRQTTADFLTSLTSPAERQ-IKPG-YEKKVPRTPQEFETYWRNSPEYAQLMKEIDEYLDRCSESDTKEAYRE 380 (1394)
T ss_pred HHcCCCCCCCCChHHHHHhccChhhhh-cccc-ccccCCCCHHHHHHHHHcCHHHHHHHHHHHHHhhhccchhhHHHHHH
Confidence 999999999999999999998765422 1111 011123467889999988876655444332211000
Q ss_pred ----CCCCccccccccccCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhccccCCCCCcCCccceehHH
Q 000808 307 ----KSHPAALTTKMYGVGKKELLKANISRELLLMKRNSFVYIFKLTQLSSMALVSMTLFFRTKMHKDSVSDGGIYVGAT 382 (1275)
Q Consensus 307 ----~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~~~~g~~ 382 (1275)
+..........+..+.++|+..+++|.++..+||+..+..++++.+++++++|++|++.+.+. .+...+.|++
T Consensus 381 ~~~~~~~~~~~~~~~~~~s~~~Q~~~l~~R~~~~~~Rd~~~~~~r~~~~ii~~li~G~~F~~~~~~~---~~~~~r~g~l 457 (1394)
T TIGR00956 381 SHVAKQSKRTRPSSPYTVSFSMQVKYCLARNFLRMKGNPSFTLFMVFGNIIMALILSSVFYNLPKNT---SDFYSRGGAL 457 (1394)
T ss_pred HHHhhhcccccCCCCCcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCCc---hhHHHHHHHH
Confidence 000011123356788999999999999999999999999999999999999999999987533 3345678999
Q ss_pred HHHHHHHHHhhhHHHHHHhhcchhHHHhhhcCCcchhHHHHHHHHHHhhHHHHHHHHHHhhhhhcccccCChhHHHHHHH
Q 000808 383 FFAVMMTMFNGMSDISMTIAKLPVFYKQRDLRFYAAWAYALPAWILKIPISFLEVAVWVFLTYYVIGFDPNIGRLFKQFL 462 (1275)
Q Consensus 383 f~~i~~~~~~~~~~~~~~~~~~~v~~~~r~~~~y~~~~y~l~~~i~~~p~~~~~~~~~~~i~Y~l~gl~~~~g~~~~~~l 462 (1275)
|+++++..+.++..+...+.+|++++|||..++|++++|++++.++++|+.++.+++|++|+|||+||++++++|+.+++
T Consensus 458 f~~~~~~~~~~~~~i~~~~~eR~i~~re~~~~~Y~~~ay~la~~l~~iP~~~~~~~if~~i~Yfm~gl~~~~~~Ff~f~l 537 (1394)
T TIGR00956 458 FFAILFNAFSSLLEIASMYEARPIVEKHRKYALYHPSADAIASIISEIPFKIIESVVFNIILYFMVNFRRTAGRFFFYLL 537 (1394)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCcceeeeccccccCHHHHHHHHHHHHHHHHHHHHHHHHhhhEEcCCCcccHHHHHHHHH
Confidence 99999988888888888889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccccccCCCccchhhhhHhhCHHHHHHHHHHHhHcCCCcc
Q 000808 463 LLLLVNQMASALFRFIAAAGRNMIVAMSFGSFVLLVLFAFGGFVLSRDDIKKWWVWGYWCSPMMYAQNAIVANEFFGHSW 542 (1275)
Q Consensus 463 ~~~l~~~~~~~l~~~i~~~~~~~~ia~~~~~~~~~~~~l~~gf~i~~~~i~~~~~w~~~~sp~~y~~~al~~~ef~~~~~ 542 (1275)
+.++...++++++.+++++++++.+|+.+++++++++++|+||+++.++||.||+|++|+||+.|++++++.|||.+..+
T Consensus 538 ~~~l~~~~~~~~~~~i~a~~~~~~~A~~~~~~~~~~~~lf~Gf~i~~~~mp~~~~W~~yisp~~yafeal~~nef~~~~~ 617 (1394)
T TIGR00956 538 ILFICTLAMSHLFRSIGAVTKTLSEAMTPAAILLLALSIYTGFAIPRPSMLGWSKWIYYVNPLAYAFESLMVNEFHGRRF 617 (1394)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcccccChhhccHHHHHHHHcCHHHHHHHHHHHhhhcCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred ccc---cC----------C-C----------cccchHHHhhhcCcccCCcchhHHHHHHHHHHHHHHHHHHHHHhhcccC
Q 000808 543 RKF---TS----------N-S----------NETLGVQVLKSRGFFPHAYWYWLGLGATIGFVLLFNIGFTLSLTFLNQF 598 (1275)
Q Consensus 543 ~~~---~~----------~-~----------~~~~g~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~i~~~~~l~~~~~~ 598 (1275)
.|. +. + . ....|.++|.. ++.....|.|.+++++++++++|.+++++++.+.+..
T Consensus 618 ~C~~~~p~g~~y~~~~~~~~~C~~~g~~~g~~~~~G~~~L~~-~~~~~~~~~w~n~gil~~~~v~f~~~~~l~l~~~~~~ 696 (1394)
T TIGR00956 618 ECSQYVPSGGGYDNLGVTNKVCTVVGAEPGQDYVDGDDYLKL-SFQYYNSHKWRNFGIIIGFTVFFFFVYILLTEFNKGA 696 (1394)
T ss_pred cccccccCCCCCCCCCccCccccCCCCcCCcccccHHHHHHh-cCCcccchhhHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 774 11 0 0 13467888884 3333456789999999999999999999999987744
Q ss_pred CCCcceeccCCcccccCCcCCCCcccccCCCCCCCCCCCCcccccccchhhhhcccccccccccCccCCCcccCCCCcEE
Q 000808 599 EKPRAVISDESESNDLGNRIGGTAQLSTHGSNSSHKTCSESEDITVKDSFSQLLSQREVTVGAIQPKKRGMVLPFEPHSL 678 (1275)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (1275)
................. .+... ..+......+..... .......+ ...... ......+.....+
T Consensus 697 ~~~~~~~~~~~~~~~~~------~~~~~----~~~~~~~~~e~~~~~-~~~~~~~~----~~~~~~-~~~~~~~~~~~~l 760 (1394)
T TIGR00956 697 KQKGEILVFRRGSLKRA------KKAGE----TSASNKNDIEAGEVL-GSTDLTDE----SDDVND-EKDMEKESGEDIF 760 (1394)
T ss_pred CCCCceEeeccccccch------hhccc----ccccccccccccccC-CCCccccc----cccccc-cccccccCCCceE
Confidence 33222211111000000 00000 000000000000000 00000000 000000 0000000112358
Q ss_pred EEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCc-eEEEEEEEcCccCC
Q 000808 679 TFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YITGNITISGYPKK 757 (1275)
Q Consensus 679 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~-~~~G~i~~~g~~~~ 757 (1275)
+|+|++|+++.+ ++++.+|+|||++++|||++||+||||||||||||+|+|+.+++ +.+|+|.+||.+..
T Consensus 761 ~~~nl~~~~~~~---------~~~~~iL~~vs~~i~~Ge~~aI~G~sGaGKSTLL~~Lag~~~~g~~~~G~I~i~G~~~~ 831 (1394)
T TIGR00956 761 HWRNLTYEVKIK---------KEKRVILNNVDGWVKPGTLTALMGASGAGKTTLLNVLAERVTTGVITGGDRLVNGRPLD 831 (1394)
T ss_pred EEEeeEEEecCC---------CCCcEeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECC
Confidence 999999987421 13457999999999999999999999999999999999987644 35699999999875
Q ss_pred cccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHH
Q 000808 758 QETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKR 837 (1275)
Q Consensus 758 ~~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqr 837 (1275)
. .+++.+|||+|+|.+++.+||+|++.|++.++.+...++++++++++++++.+||.+++|+.+|.++. +||||||||
T Consensus 832 ~-~~~~~i~yv~Q~~~~~~~~Tv~E~L~~~a~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~d~~v~~~~~-~LSgGqrqR 909 (1394)
T TIGR00956 832 S-SFQRSIGYVQQQDLHLPTSTVRESLRFSAYLRQPKSVSKSEKMEYVEEVIKLLEMESYADAVVGVPGE-GLNVEQRKR 909 (1394)
T ss_pred h-hhhcceeeecccccCCCCCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCChhhCCCeeCCCCC-CCCHHHhhH
Confidence 3 46778999999999999999999999999888766566667778899999999999999999986543 899999999
Q ss_pred HHHHHHHhhCCc-EEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcEEEEECCCC
Q 000808 838 LTIAVELVANPS-IIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVGPLG 916 (1275)
Q Consensus 838 v~ia~~l~~~p~-illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~~ 916 (1275)
++||+||+.+|+ ||||||||||||+.++..+++.|++++++|+|||+++|||+..+++.||++++|++||+++|+|+++
T Consensus 910 l~Ia~aL~~~P~~iLlLDEPTsgLD~~~~~~i~~~L~~la~~g~tvI~t~H~~~~~~~~~~D~vl~L~~GG~iv~~G~~~ 989 (1394)
T TIGR00956 910 LTIGVELVAKPKLLLFLDEPTSGLDSQTAWSICKLMRKLADHGQAILCTIHQPSAILFEEFDRLLLLQKGGQTVYFGDLG 989 (1394)
T ss_pred HHHHHHHHcCCCeEEEEcCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHhcCEEEEEcCCCEEEEECCcc
Confidence 999999999997 9999999999999999999999999988899999999999977788999999999888999999998
Q ss_pred ccchHHHHHHhcCCCcccCCCCCCCccchhhhccccccchhhhhHHHHhhccHHHHHHHHHHHHhcCCCCCC---CCCCC
Q 000808 917 RHSCHLIRYFEGIPGVENIKDGYNPATWMLEVTAKSQELTLEIDFTDIYKGSELYRRNKALIEELSRPAPGS---KDLYF 993 (1275)
Q Consensus 917 ~~~~~~~~~f~~~~~~~~~~~~~npad~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~---~~~~~ 993 (1275)
+.++++++||+++| .++||+++|||||++|+++...+.....++.+.|+.|+.+++..+.++....+.... .+...
T Consensus 990 ~~~~~~~~yf~~~G-~~~~p~~~NpAd~~ldvi~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1068 (1394)
T TIGR00956 990 ENSHTIINYFEKHG-APKCPEDANPAEWMLEVIGAAPGAHANQDYHEVWRNSSEYQAVKNELDRLEAELSKAEDDNDPDA 1068 (1394)
T ss_pred cccchHHHHHHhcC-CCCCCCCCCHHHHHHHHhhcccccchhccHHHHHhcCHHHHHHHHHHHHhhcccccCcccccccc
Confidence 88889999999875 347999999999999998765443334578999999988776655554443321111 11112
Q ss_pred CCCCCCcHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCchhhHHHHHhHHHHHHHHHHHHHh
Q 000808 994 PTHYTQSFFMQCVACLWKQHWSYWRNPPYTAVRFLFTTVIALTFGTMFWDMGTKMKRNQDLFNAMGSMYTAVFFLGAQYC 1073 (1275)
Q Consensus 994 ~~~~~~~~~~q~~~l~~R~~~~~~R~~~~~~~~~~~~~~~~l~~g~~f~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~ 1073 (1275)
..++++|||+|+++|++|+++++||||.++++|+++++++|+++|++||+++++ .+++++++|++|+++++.++..
T Consensus 1069 ~~~~~~s~~~q~~~l~~R~~~~~~R~~~~~~~r~~~~i~~~l~~G~~f~~~~~~---~~~i~~~~g~~f~~~~~~~~~~- 1144 (1394)
T TIGR00956 1069 LSKYAASLWYQFKLVLWRTFQQYWRTPDYLYSKFFLTIFAALFIGFTFFKVGTS---LQGLQNQMFAVFMATVLFNPLI- 1144 (1394)
T ss_pred ccccCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhCCCCC---HHHHHHHHHHHHHHHHHHHHHH-
Confidence 246889999999999999999999999999999999999999999999999874 6789999999999888777653
Q ss_pred hhhhhhHHHhhHHH-HhHccCCCCChHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccccHHH-------HHHHHHHHH
Q 000808 1074 SSVQPVVAVERAVF-CREKGAGMYSAMPYAFAQVMIEIPYIFVLSSVYGIIVYAMIGFEWIAAK-------FFWYLFFMF 1145 (1275)
Q Consensus 1074 ~~~~~~~~~er~v~-~rE~~~~~Y~~~~y~~a~~~~~~p~~~~~~~~~~~i~Y~~~gl~~~~~~-------f~~~~~~~~ 1145 (1275)
..++|.|+.||.+| +||+.+|+|++.+|++|++++|+|+.++.+++|++|+|||+||++++.. |++|+++++
T Consensus 1145 ~~~~~~f~~~r~~~~~RE~~s~~Y~~~~y~~a~~l~elP~~~~~~~if~~i~Y~~~Gl~~~~~~~~~~~~~f~~~~~~~~ 1224 (1394)
T TIGR00956 1145 QQYLPPFVAQRDLYEVRERPSRTFSWLAFIAAQITVEIPYNLVAGTIFFFIWYYPVGFYWNASKTGQVHERGVLFWLLST 1224 (1394)
T ss_pred HHhhhhHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHhheeecccccCcccccccccchHHHHHHHHH
Confidence 45567888888885 8999999999999999999999999999999999999999999988765 999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCcCCCCccchhhHHhhhchHHHHHHHHHHHhhCCcccccC
Q 000808 1146 FSLLYFTFYGMMTVAMTPNHHIAAIVSILFYGLWNVFSGFVIPRTRIPLWWRWYYWANPVAWTMYGLVASQFGDVEDKME 1225 (1275)
Q Consensus 1146 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~l~~G~~i~~~~ip~~~~w~~~~sp~~y~~~~l~~~~f~~~~~~~~ 1225 (1275)
+..++++++|+++++++|+..+|+.+++++++++++||||++++++||.||+|++|+||++|+++|++.|||++.+..|.
T Consensus 1225 ~~~~~~~s~g~~~~~~~~~~~~a~~~~~~~~~~~~lf~G~~~~~~~ip~~~~w~~~~sp~~y~~~~l~~~~~~~~~~~C~ 1304 (1394)
T TIGR00956 1225 MFFLYFSTLGQMVISFNPNADNAAVLASLLFTMCLSFCGVLAPPSRMPGFWIFMYRCSPFTYLVQALLSTGLADVPVTCK 1304 (1394)
T ss_pred HHHHHHHHHHHHHHHHCCcHHHHHHHHHHHHHHHHHhccccCChhHCcHHHhHHHhcCHHHHHHHHHHHHHcCCCeeecC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999887774
Q ss_pred C----------CCcHHHH-------------------------------HHhhcCCCCcchhHHHHHHHHHHHHHHHHHH
Q 000808 1226 S----------GETVKQF-------------------------------VRSYFDFKHDFLGVVAVVVAAFAVLFGVLFA 1264 (1275)
Q Consensus 1226 ~----------~~~~~~~-------------------------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 1264 (1275)
. |.+|++| .+..+|++.++.|+|++++++|++++ ++++
T Consensus 1305 ~~e~~~f~pp~~~tC~~y~~~~~~~~~G~l~~~~a~~~C~yC~~~~~~~~l~~~~~~~~~~w~~~~i~~~~~~~~-~~~~ 1383 (1394)
T TIGR00956 1305 VKELLTFNPPSGQTCGEYMKPYLENAGGYLLNPNATDSCSFCQYSYTNDFLEPISSKYSGRWRNFGIFIAFIFFN-IIAT 1383 (1394)
T ss_pred ccccceecCCCCCCHHHHHHHHHhhCCcEeeCCCCCCCCCcCCCCCHHHHHHHcCCcccccccchhhhhHHHHHH-HHHH
Confidence 2 2233322 23466888889999999999999988 7778
Q ss_pred HHHhhccc
Q 000808 1265 VGIKRFNF 1272 (1275)
Q Consensus 1265 ~~l~~~~~ 1272 (1275)
+++.+...
T Consensus 1384 ~~l~~~~r 1391 (1394)
T TIGR00956 1384 VFFYWLAR 1391 (1394)
T ss_pred HhhheEEE
Confidence 88877643
No 4
>KOG0061 consensus Transporter, ABC superfamily (Breast cancer resistance protein) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=8.5e-96 Score=897.10 Aligned_cols=576 Identities=31% Similarity=0.543 Sum_probs=503.1
Q ss_pred CcEEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCc-eEEEEEEEcC
Q 000808 675 PHSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YITGNITISG 753 (1275)
Q Consensus 675 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~-~~~G~i~~~g 753 (1275)
+..+.|+|++++.+.+.. ..+++|+|||++++|||++|||||||||||||||+|+|+..++ ..+|+|++||
T Consensus 23 ~~~~~~~~~~~~~~~~~~--------~~k~iL~~vsg~~~~Gel~AimG~SGsGKtTLL~~Lagr~~~~~~~~G~ilvNG 94 (613)
T KOG0061|consen 23 PVKLSFRNLTLSSKEKSK--------KTKTILKGVSGTAKPGELLAIMGPSGSGKTTLLNALAGRLNGGLKLSGEILLNG 94 (613)
T ss_pred cceeEEEEEEEEecCCCC--------ccceeeeCcEEEEecCeEEEEECCCCCCHHHHHHHHhccccCCCcceEEEEECC
Confidence 567999999988753321 3578999999999999999999999999999999999998764 6899999999
Q ss_pred ccCCcccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHH
Q 000808 754 YPKKQETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTE 833 (1275)
Q Consensus 754 ~~~~~~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgG 833 (1275)
++...+.+++.+|||+|||.++|++||+|++.|+|.+|+|.+.++++++++|+++++.+||.+++|+++|++..||+|||
T Consensus 95 ~~~~~~~~~~~s~yV~QdD~l~~~LTV~EtL~f~A~lrlp~~~~~~~k~~~V~~vi~~LgL~~~~~t~ig~~~~rgiSGG 174 (613)
T KOG0061|consen 95 RPRDSRSFRKISGYVQQDDVLLPTLTVRETLRFSALLRLPSSLSKEEKRERVEEVISELGLEKCADTLIGNPGIRGLSGG 174 (613)
T ss_pred ccCchhhhhheeEEEcccccccccccHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCChhhccceecCCCCCccccc
Confidence 88877788999999999999999999999999999999999888999999999999999999999999999988999999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcEEEEEC
Q 000808 834 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVG 913 (1275)
Q Consensus 834 erqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g 913 (1275)
|||||+||.+|++||+||||||||||||+.++.+++++|+++|++|+|||+|+|||+.+++++||++++|++ |+++|+|
T Consensus 175 ErkRvsia~Ell~~P~iLflDEPTSGLDS~sA~~vv~~Lk~lA~~grtVi~tIHQPss~lf~lFD~l~lLs~-G~~vy~G 253 (613)
T KOG0061|consen 175 ERKRVSIALELLTDPSILFLDEPTSGLDSFSALQVVQLLKRLARSGRTVICTIHQPSSELFELFDKLLLLSE-GEVVYSG 253 (613)
T ss_pred hhhHHHHHHHHHcCCCEEEecCCCCCcchhhHHHHHHHHHHHHhCCCEEEEEEeCCcHHHHHHHhHhhhhcC-CcEEEec
Confidence 999999999999999999999999999999999999999999999999999999999999999999999997 6999999
Q ss_pred CCCccchHHHHHHhcCCCcccCCCCCCCccchhhhcccc-ccchhhhhHHHHhhc------cHHHHHHHH-HHHHhcCCC
Q 000808 914 PLGRHSCHLIRYFEGIPGVENIKDGYNPATWMLEVTAKS-QELTLEIDFTDIYKG------SELYRRNKA-LIEELSRPA 985 (1275)
Q Consensus 914 ~~~~~~~~~~~~f~~~~~~~~~~~~~npad~~~~~~~~~-~~~~~~~~~~~~~~~------s~~~~~~~~-~~~~~~~~~ 985 (1275)
++ +++.+||+++|. +||+++||+||++|+++.. .... ..+..+.++. .....+... ........
T Consensus 254 ~~----~~~~~ff~~~G~--~~P~~~Npadf~l~l~s~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 325 (613)
T KOG0061|consen 254 SP----RELLEFFSSLGF--PCPELENPADFLLDLLSVDSGTRE-LEEAVRIAKLINKFSQTDNLKKTLEALEKSLSTS- 325 (613)
T ss_pred CH----HHHHHHHHhCCC--CCCCcCChHHHHHHHHccCCCchh-HHhHHHHHHHhhhccccchhhhhHHHHhhhcccc-
Confidence 98 678999999963 5999999999999998853 1111 0111111111 111011000 00011100
Q ss_pred CCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCchhhHHHHHhHHHHHH
Q 000808 986 PGSKDLYFPTHYTQSFFMQCVACLWKQHWSYWRNPPYTAVRFLFTTVIALTFGTMFWDMGTKMKRNQDLFNAMGSMYTAV 1065 (1275)
Q Consensus 986 ~~~~~~~~~~~~~~~~~~q~~~l~~R~~~~~~R~~~~~~~~~~~~~~~~l~~g~~f~~~~~~~~~~~~~~~~~~~lf~~~ 1065 (1275)
.+ .+.....+||.|++.+++|.+++.+|||.+...|+++.+.+|+++|++||+++++ ..+++++.|++|+.+
T Consensus 326 ---~~--~~~~~~~s~~~q~~~L~~R~~~~~~R~~~~~~~r~~~~~~~~~~lg~~~~~~~~~---~~~~~~~~g~~~~~~ 397 (613)
T KOG0061|consen 326 ---KK--VEIGTSPSWWTQFKILLKRSLKNIRRDPSLLLLRLIQSLVTGLLLGLLYLNLGND---AKGIQNRLGLFFFIL 397 (613)
T ss_pred ---cc--cccccCCcHHHHHHHHHHHHhHHHhhcHHHHHHHHHHHHHHHHHHHHHhhCCCCc---hHHHHHHHHHHHHHH
Confidence 00 1111268999999999999999999999999999999999999999999999765 445668999999999
Q ss_pred HHHHHHHhhhhhhhHHHhhHHHHhHccCCCCChHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccccHHHHHHHHHHHH
Q 000808 1066 FFLGAQYCSSVQPVVAVERAVFCREKGAGMYSAMPYAFAQVMIEIPYIFVLSSVYGIIVYAMIGFEWIAAKFFWYLFFMF 1145 (1275)
Q Consensus 1066 ~~~~~~~~~~~~~~~~~er~v~~rE~~~~~Y~~~~y~~a~~~~~~p~~~~~~~~~~~i~Y~~~gl~~~~~~f~~~~~~~~ 1145 (1275)
.++.+..+.+.++.|+.||++|.||+.+|+|+.++||+|++++++|+.++.+++|++|+|||+|++++..+|++|+++++
T Consensus 398 ~~~~f~~~~~~i~~f~~e~~~f~rE~~~~~Y~~s~y~la~~l~~lP~~~i~~~if~~i~Y~m~gl~~~~~~f~~~~l~~~ 477 (613)
T KOG0061|consen 398 SFMTFLSMFGAVPVFPQERPIFLRETSSGLYRLSSYYLAKTLAELPFLLVLSIIFSSIVYWMVGLNPGLSRFLYFLLIIL 477 (613)
T ss_pred HHHHHHHHHhHHHHhHHHHHHHHHHHhcCchhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHH
Confidence 99888888877899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCcCCCCccchhhHHhhhchHHHHHHHHHHHhhCCcccccC
Q 000808 1146 FSLLYFTFYGMMTVAMTPNHHIAAIVSILFYGLWNVFSGFVIPRTRIPLWWRWYYWANPVAWTMYGLVASQFGDVEDKME 1225 (1275)
Q Consensus 1146 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~l~~G~~i~~~~ip~~~~w~~~~sp~~y~~~~l~~~~f~~~~~~~~ 1225 (1275)
+..++++++|++++++.|+...|..+++++++.+++|+||+++.++||+||+|++|+|+++|++||++.|||.+....|.
T Consensus 478 ~~~~~a~s~~~~i~~~~~~~~~a~~~~~~~~~~f~l~~G~fi~~~~ip~~~~w~~~~S~~ry~~e~l~~n~~~~~~~~~~ 557 (613)
T KOG0061|consen 478 LSSLVAESLGLFISAIVPNLSLATSLGPVLLLPFLLFGGFFINFDSIPKYFRWISYLSYFRYAFEALLINQFSGGSSRCF 557 (613)
T ss_pred HHHHHHHHHHHHHHHhccchhheeehHHHHHHHHHHHhhhhcCcccccHHHHHHHHHhHHHHHHHHHHHHHhhccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999997334442
Q ss_pred C-----CCcHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhcccccC
Q 000808 1226 S-----GETVKQFVRSYFDFKHDFLGVVAVVVAAFAVLFGVLFAVGIKRFNFQNR 1275 (1275)
Q Consensus 1226 ~-----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~r 1275 (1275)
. ....++.++...+++..+.|.|+.+++++.++|+++++++|++....+|
T Consensus 558 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~l~~~~~~~~il~y~~L~~~~~~~~ 612 (613)
T KOG0061|consen 558 LSGNLCCESTGEDVLKQLGFEDSSFWLDLLVLLAFIVFFRVLGYLALRFRVKRKR 612 (613)
T ss_pred cCcCCcccccHHHHHHhcCCcccccchhHHHHHHHHHHHHHHHHHHHHhhccccC
Confidence 1 1122444556889999999999999999999999999999998776654
No 5
>PLN03211 ABC transporter G-25; Provisional
Probab=100.00 E-value=8.1e-94 Score=889.69 Aligned_cols=580 Identities=24% Similarity=0.396 Sum_probs=481.4
Q ss_pred CcEEEEEeEEEEEeccchh----------------hhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHC
Q 000808 675 PHSLTFDEVTYSVDMPKEM----------------KLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAG 738 (1275)
Q Consensus 675 ~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g 738 (1275)
+..++|.+++|+++..... +...+..+++.+|+|||++++|||++||+||||||||||||+|+|
T Consensus 37 ~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iL~~vs~~i~~Ge~~aI~GpnGaGKSTLL~iLaG 116 (659)
T PLN03211 37 PITLKFMDVCYRVKFENMKNKGSNIKRILGHKPKISDETRQIQERTILNGVTGMASPGEILAVLGPSGSGKSTLLNALAG 116 (659)
T ss_pred ceEEEEEeEEEEEccCCCcccccccccccccccccccccccCCCCeeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhC
Confidence 5789999999988644200 000112245679999999999999999999999999999999999
Q ss_pred CCCCceEEEEEEEcCccCCcccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccc
Q 000808 739 RKTGGYITGNITISGYPKKQETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLR 818 (1275)
Q Consensus 739 ~~~~~~~~G~i~~~g~~~~~~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~ 818 (1275)
+.+++..+|+|.+||.+.... .++.+|||+|++.+++.+||+|++.|++.++.+...+.++++++++++++.+||.+++
T Consensus 117 ~~~~~~~sG~I~inG~~~~~~-~~~~i~yv~Q~~~l~~~lTV~E~l~~~a~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~ 195 (659)
T PLN03211 117 RIQGNNFTGTILANNRKPTKQ-ILKRTGFVTQDDILYPHLTVRETLVFCSLLRLPKSLTKQEKILVAESVISELGLTKCE 195 (659)
T ss_pred CCCCCceeEEEEECCEECchh-hccceEEECcccccCCcCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCChhhc
Confidence 876444689999999886532 3456899999999999999999999998877665555666677899999999999999
Q ss_pred cccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhh
Q 000808 819 QSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFD 898 (1275)
Q Consensus 819 ~~~~~~~~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d 898 (1275)
|+.+|+...++||||||||++||++|+.+|+||+|||||+|||+.++..+++.|++++++|+|||+++|||+.++++.+|
T Consensus 196 ~t~vg~~~~~~LSgGerqRv~ia~aL~~~P~iLlLDEPtsgLD~~~~~~l~~~L~~l~~~g~TvI~~sH~~~~~i~~~~D 275 (659)
T PLN03211 196 NTIIGNSFIRGISGGERKRVSIAHEMLINPSLLILDEPTSGLDATAAYRLVLTLGSLAQKGKTIVTSMHQPSSRVYQMFD 275 (659)
T ss_pred CceeCCCCCCCcChhhhhHHHHHHHHHhCCCEEEEeCCCCCcCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhc
Confidence 99999877889999999999999999999999999999999999999999999999988899999999999977899999
Q ss_pred hhheeecCcEEEEECCCCccchHHHHHHhcCCCcccCCCCCCCccchhhhccccccch---------hhhhHHHHhhccH
Q 000808 899 ELFLMKRGGQEIYVGPLGRHSCHLIRYFEGIPGVENIKDGYNPATWMLEVTAKSQELT---------LEIDFTDIYKGSE 969 (1275)
Q Consensus 899 ~~~~l~~gg~~~~~g~~~~~~~~~~~~f~~~~~~~~~~~~~npad~~~~~~~~~~~~~---------~~~~~~~~~~~s~ 969 (1275)
++++|++ |+++|+|+. +++.+||+++|. .||.++|||||++|+++...+.. ......+.|+...
T Consensus 276 ~iilL~~-G~iv~~G~~----~~~~~~f~~~G~--~~P~~~NpADf~ldv~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 348 (659)
T PLN03211 276 SVLVLSE-GRCLFFGKG----SDAMAYFESVGF--SPSFPMNPADFLLDLANGVCQTDGVSEREKPNVKQSLVASYNTLL 348 (659)
T ss_pred eEEEecC-CcEEEECCH----HHHHHHHHHCCC--CCCCCCCHHHHHHHHcCccccCCCccccccchHHHHHHHHHHhhc
Confidence 9999985 799999998 578999999963 69999999999999987532100 0011223342211
Q ss_pred HHHHHHHHHHHh--cC-CCC-----CCCCC-CCCCCCCCcHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHH
Q 000808 970 LYRRNKALIEEL--SR-PAP-----GSKDL-YFPTHYTQSFFMQCVACLWKQHWSYWRNPPYTAVRFLFTTVIALTFGTM 1040 (1275)
Q Consensus 970 ~~~~~~~~~~~~--~~-~~~-----~~~~~-~~~~~~~~~~~~q~~~l~~R~~~~~~R~~~~~~~~~~~~~~~~l~~g~~ 1040 (1275)
.++.....+.. .. ... ..+.. .....+..+||+|+.+|++|++++ |||+.+...|+++++++|+++|++
T Consensus 349 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~L~~R~~~~-~r~~~~~~~r~~~~i~~~ll~G~l 426 (659)
T PLN03211 349 -APKVKAAIEMSHFPQANARFVGSASTKEHRSSDRISISTWFNQFSILLQRSLKE-RKHESFNTLRVFQVIAAALLAGLM 426 (659)
T ss_pred -cHHHHHHHhhhhhhcchhhhhhcccccccccCCCccCCCHHHHHHHHHHHHHHH-HhCcHHHHHHHHHHHHHHHHHHHH
Confidence 11111111110 00 000 00000 011235578999999999999888 899999999999999999999999
Q ss_pred hcCCCCCCCchhhHHHHHhHHHHHHHHHHHHHhhhhhhhHHHhhHHHHhHccCCCCChHHHHHHHHHHHHHHHHHHHHHH
Q 000808 1041 FWDMGTKMKRNQDLFNAMGSMYTAVFFLGAQYCSSVQPVVAVERAVFCREKGAGMYSAMPYAFAQVMIEIPYIFVLSSVY 1120 (1275)
Q Consensus 1041 f~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~~~~~er~v~~rE~~~~~Y~~~~y~~a~~~~~~p~~~~~~~~~ 1120 (1275)
||+++ ..+++++.|++||++++.++.+++..++.|+.||++|+||+.+|+|++++|++|++++|+|+.++.+++|
T Consensus 427 f~~~~-----~~~~~~r~g~lff~~~~~~~~~~~~~~~~f~~er~v~~rE~~~~~Y~~~~Y~la~~l~elP~~~~~~~if 501 (659)
T PLN03211 427 WWHSD-----FRDVQDRLGLLFFISIFWGVFPSFNSVFVFPQERAIFVKERASGMYTLSSYFMARIVGDLPMELILPTIF 501 (659)
T ss_pred HhcCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99985 3568899999999998988888777889999999999999999999999999999999999999999999
Q ss_pred hhhhhccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCcCCCCccchhhHHh
Q 000808 1121 GIIVYAMIGFEWIAAKFFWYLFFMFFSLLYFTFYGMMTVAMTPNHHIAAIVSILFYGLWNVFSGFVIPRTRIPLWWRWYY 1200 (1275)
Q Consensus 1121 ~~i~Y~~~gl~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~l~~G~~i~~~~ip~~~~w~~ 1200 (1275)
++|+|||+||++++++||+|++++++..++++++|+++++++|+..+|+.+++++++++++|+||+++ +||+||+|++
T Consensus 502 ~~i~Y~m~Gl~~~~~~F~~f~li~~l~~~~~~s~g~~i~a~~~~~~~a~~~~~~~~~~~~lfsGf~i~--~ip~~~~W~~ 579 (659)
T PLN03211 502 LTVTYWMAGLKPELGAFLLTLLVLLGYVLVSQGLGLALGAAIMDAKKASTIVTVTMLAFVLTGGFYVH--KLPSCMAWIK 579 (659)
T ss_pred HhheeEcCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhhhHh--hchHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999997 7999999999
Q ss_pred hhchHHHHHHHHHHHhhCCcc-----cccCCC----CcHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhcc
Q 000808 1201 WANPVAWTMYGLVASQFGDVE-----DKMESG----ETVKQFVRSYFDFKHDFLGVVAVVVAAFAVLFGVLFAVGIKRFN 1271 (1275)
Q Consensus 1201 ~~sp~~y~~~~l~~~~f~~~~-----~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~ 1271 (1275)
|+||++|++++++.|||++.. ..|+.. .....++ ...+++....|.++++|++++++|+++++++|++++
T Consensus 580 ylS~~~y~~eal~~nef~~~~~~~~~~~C~~~~~~~~~~c~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~L~~~~ 658 (659)
T PLN03211 580 YISTTFYSYRLLINVQYGEGKRISSLLGCSLPHGSDRASCKFV-EEDVAGQISPATSVSVLIFMFVGYRLLAYLALRRIK 658 (659)
T ss_pred HhCHHHHHHHHHHHHhcCCccccccccCCCCcccCCCCCCccc-hhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 999999999999999998654 246421 0111122 223444556899999999999999999999999887
Q ss_pred c
Q 000808 1272 F 1272 (1275)
Q Consensus 1272 ~ 1272 (1275)
|
T Consensus 659 ~ 659 (659)
T PLN03211 659 H 659 (659)
T ss_pred C
Confidence 6
No 6
>TIGR00955 3a01204 The Eye Pigment Precursor Transporter (EPP) Family protein.
Probab=100.00 E-value=1.4e-93 Score=891.10 Aligned_cols=565 Identities=29% Similarity=0.475 Sum_probs=496.6
Q ss_pred cccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCc-eEEEEEEEcCccCCcccccceEEEeccCCCCCCCCC
Q 000808 701 DKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YITGNITISGYPKKQETFTRISGYCEQNDIHSPFVT 779 (1275)
Q Consensus 701 ~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~-~~~G~i~~~g~~~~~~~~~~~~~~v~q~~~~~~~lt 779 (1275)
+++++|+|+|++++|||+++|+|||||||||||++|+|+.+++ ..+|+|.+||.+.....+++.+|||+|+|.+++.+|
T Consensus 36 ~~~~iL~~vs~~i~~Ge~~aI~G~sGsGKSTLL~~L~g~~~~~~~~~G~i~~~g~~~~~~~~~~~i~yv~Q~~~~~~~lT 115 (617)
T TIGR00955 36 PRKHLLKNVSGVAKPGELLAVMGSSGAGKTTLMNALAFRSPKGVKGSGSVLLNGMPIDAKEMRAISAYVQQDDLFIPTLT 115 (617)
T ss_pred CccccccCCEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCHHHHhhhceeeccccccCccCc
Confidence 3567999999999999999999999999999999999986543 358999999998765566788999999999999999
Q ss_pred HHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCC-CCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCC
Q 000808 780 VYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPG-ESGLSTEQRKRLTIAVELVANPSIIFMDEPTS 858 (1275)
Q Consensus 780 v~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~-~~~lSgGerqrv~ia~~l~~~p~illlDEPts 858 (1275)
|+||+.|++.++.+...+.++++++++++++.+||.+++|+.+|+++ .++||||||||++||++|+.+|++++|||||+
T Consensus 116 V~e~l~f~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~~LSgGqrkRvsia~aL~~~p~vlllDEPts 195 (617)
T TIGR00955 116 VREHLMFQAHLRMPRRVTKKEKRERVDEVLQALGLRKCANTRIGVPGRVKGLSGGERKRLAFASELLTDPPLLFCDEPTS 195 (617)
T ss_pred HHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCchhcCcCccCCCCCCCCcCcchhhHHHHHHHHHcCCCEEEeeCCCc
Confidence 99999999999887766777788889999999999999999999754 57899999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcEEEEECCCCccchHHHHHHhcCCCcccCCCC
Q 000808 859 GLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVGPLGRHSCHLIRYFEGIPGVENIKDG 938 (1275)
Q Consensus 859 gLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~~~~~~~~~~~f~~~~~~~~~~~~ 938 (1275)
|||+.++..+++.|++++++|+|||+++|||+.++++.||++++|++ |+++|+|++ +++.+||+++|. .||++
T Consensus 196 gLD~~~~~~l~~~L~~l~~~g~tvi~~~hq~~~~i~~~~D~i~ll~~-G~~v~~G~~----~~~~~~f~~~g~--~~p~~ 268 (617)
T TIGR00955 196 GLDSFMAYSVVQVLKGLAQKGKTIICTIHQPSSELFELFDKIILMAE-GRVAYLGSP----DQAVPFFSDLGH--PCPEN 268 (617)
T ss_pred chhHHHHHHHHHHHHHHHhCCCEEEEEeCCCCHHHHHHhceEEEeeC-CeEEEECCH----HHHHHHHHHcCC--CCCCC
Confidence 99999999999999999888999999999999889999999999985 799999998 578999999863 69999
Q ss_pred CCCccchhhhccccccch-----hhhhHHHHhhccHHHHHHHHHHHHhcCCCC---CCCCCCCCCCCCCcHHHHHHHHHH
Q 000808 939 YNPATWMLEVTAKSQELT-----LEIDFTDIYKGSELYRRNKALIEELSRPAP---GSKDLYFPTHYTQSFFMQCVACLW 1010 (1275)
Q Consensus 939 ~npad~~~~~~~~~~~~~-----~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~q~~~l~~ 1010 (1275)
.|||||++|+++...+.. ...++.+.|+.++.+++..+.........+ ...+......+..+|+.|+..|++
T Consensus 269 ~n~ad~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~l~~ 348 (617)
T TIGR00955 269 YNPADFYVQVLAVIPGSENESRERIEKICDSFAVSDIGRDMLVNTNLWSGKAGGLVKDSENMEGIGYNASWWTQFYALLK 348 (617)
T ss_pred CChHHHHHHHhhcCcccccchHHHHHHHHHHHhcchhhHHHHHHhhhhhccccccccccccccccccCCCHHHHHHHHHH
Confidence 999999999987543221 112445566666555443333222111111 111111224567899999999999
Q ss_pred HHHHHhhcChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCchhhHHHHHhHHHHHHHHHHHHHhhhhhhhHHHhhHHHHhH
Q 000808 1011 KQHWSYWRNPPYTAVRFLFTTVIALTFGTMFWDMGTKMKRNQDLFNAMGSMYTAVFFLGAQYCSSVQPVVAVERAVFCRE 1090 (1275)
Q Consensus 1011 R~~~~~~R~~~~~~~~~~~~~~~~l~~g~~f~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~~~~~er~v~~rE 1090 (1275)
|++++.||||.++..|+++.+++|+++|++||+++++ .++.+++.|++|++++++++.++....+.|+.||++|+||
T Consensus 349 R~~~~~~R~~~~~~~~~~~~i~~~li~G~~f~~~~~~---~~~~~~~~g~lf~~~~~~~f~~~~~~~~~f~~er~v~~rE 425 (617)
T TIGR00955 349 RSWLSVLRDPLLLKVRLIQTMMTAILIGLIYLGQGLT---QKGVQNINGALFLFLTNMTFQNVFPVINVFTAELPVFLRE 425 (617)
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCC---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999864 5678899999999999888887777788999999999999
Q ss_pred ccCCCCChHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHH
Q 000808 1091 KGAGMYSAMPYAFAQVMIEIPYIFVLSSVYGIIVYAMIGFEWIAAKFFWYLFFMFFSLLYFTFYGMMTVAMTPNHHIAAI 1170 (1275)
Q Consensus 1091 ~~~~~Y~~~~y~~a~~~~~~p~~~~~~~~~~~i~Y~~~gl~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 1170 (1275)
+.+|+|++++|++|++++|+|+.++.+++|++|+|||+|+++++.+||+|++++++..++++++|+++++++|+..+|+.
T Consensus 426 ~~~~~Y~~~~y~la~~l~~lp~~~~~~~if~~i~Y~~~gl~~~~~~f~~f~l~~~l~~~~~~s~~~~i~~~~~~~~~a~~ 505 (617)
T TIGR00955 426 TRSGLYRVSAYFLAKTIAELPLFIILPALFTSITYWMIGLRSGATHFLTFLFLVTLVANVATSFGYLISCAFSSTSMALT 505 (617)
T ss_pred hcCCccCHHHHHHHHHHHHHHHHHHHHHHHHhhhheeccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCcCCCCccchhhHHhhhchHHHHHHHHHHHhhCCccc-ccCCC------CcHHHHHHhhcCCCCc
Q 000808 1171 VSILFYGLWNVFSGFVIPRTRIPLWWRWYYWANPVAWTMYGLVASQFGDVED-KMESG------ETVKQFVRSYFDFKHD 1243 (1275)
Q Consensus 1171 ~~~~~~~~~~l~~G~~i~~~~ip~~~~w~~~~sp~~y~~~~l~~~~f~~~~~-~~~~~------~~~~~~~~~~~~~~~~ 1243 (1275)
+++++++++++|+||++++++||+||+|++|+||++|++++++.|||++... +|+.+ +..++++++.||++.+
T Consensus 506 ~~~~~~~~~~lf~G~~i~~~~ip~~~~W~~~isp~~ya~~al~~nef~~~~~~~c~~~~~~~~c~~~g~~~l~~~g~~~~ 585 (617)
T TIGR00955 506 VGPPFVIPFLLFGGFFINSDSIPVYFKWLSYLSWFRYGNEGLLINQWSDVDNIECTSANTTGPCPSSGEVILETLSFRNA 585 (617)
T ss_pred HHHHHHHHHHHHhhcccChhhccHHHHHHHHcCHHHHHHHHHHHHHhCCCccccccCcCcCCCCCcChHHHHHhcCCCcc
Confidence 9999999999999999999999999999999999999999999999998765 56421 1125777789999999
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhcccccC
Q 000808 1244 FLGVVAVVVAAFAVLFGVLFAVGIKRFNFQNR 1275 (1275)
Q Consensus 1244 ~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~r 1275 (1275)
+.|.++++++++.++|+++++++|++....+|
T Consensus 586 ~~~~~~~il~~~~~~~~~l~~~~L~~~~~~~~ 617 (617)
T TIGR00955 586 DLYLDLIGLVILIFFFRLLAYFALRIRIRRKR 617 (617)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 99999999999999999999999999877776
No 7
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=7.7e-91 Score=925.99 Aligned_cols=588 Identities=23% Similarity=0.380 Sum_probs=504.9
Q ss_pred CCcEEEEEeEEEEEeccch-------------hh--h----ccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHH
Q 000808 674 EPHSLTFDEVTYSVDMPKE-------------MK--L----QGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMD 734 (1275)
Q Consensus 674 ~~~~~~~~~~~~~~~~~~~-------------~~--~----~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~ 734 (1275)
+...+.|+|++.+...... .. . .+..+.++.+|+|||+.++|||+++|+||||||||||||
T Consensus 26 ~~~~v~~~~l~v~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~aIlG~nGsGKSTLLk 105 (1394)
T TIGR00956 26 YKLGVAYKNLSAYGVAADSDYQPTFPNALLKILTRGFRKLKKFRDTKTFDILKPMDGLIKPGELTVVLGRPGSGCSTLLK 105 (1394)
T ss_pred CeeeEEEECCEEEEEeccccccCchHHHHHHHHHHHHHHhcccCCCCcceeeeCCEEEEECCEEEEEECCCCCCHHHHHH
Confidence 4567999999876522110 00 0 012234577999999999999999999999999999999
Q ss_pred HHHCCCCC--ceEEEEEEEcCccCCc--ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCC----CCCHHHHHHH-H
Q 000808 735 VLAGRKTG--GYITGNITISGYPKKQ--ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPP----EVDSETQKMF-I 805 (1275)
Q Consensus 735 ~l~g~~~~--~~~~G~i~~~g~~~~~--~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~----~~~~~~~~~~-~ 805 (1275)
+|+|+..+ .+.+|+|.+||.+... ..+++.++|++|+|.+++.+||+|++.|++.++.+. +.+.++.+++ +
T Consensus 106 ~LaG~~~~~~~~~~G~I~~~G~~~~~~~~~~r~~i~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~ 185 (1394)
T TIGR00956 106 TIASNTDGFHIGVEGVITYDGITPEEIKKHYRGDVVYNAETDVHFPHLTVGETLDFAARCKTPQNRPDGVSREEYAKHIA 185 (1394)
T ss_pred HHhCCCCCCCCCceeEEEECCEehHHHHhhcCceeEEeccccccCCCCCHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHH
Confidence 99998532 2468999999987642 234567999999999999999999999998887643 2233443333 5
Q ss_pred HHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEE
Q 000808 806 EEIMELVELNPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVC 884 (1275)
Q Consensus 806 ~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~ 884 (1275)
+++++.+||.+++|+.+|+...++|||||||||+||++|+.+|+|++|||||+|||+.++..+++.|++++++ |+|||+
T Consensus 186 ~~~l~~lgL~~~~~t~vg~~~~~~LSGGerkRvsIA~aL~~~p~vlllDEPTsgLD~~~~~~i~~~L~~la~~~g~tvii 265 (1394)
T TIGR00956 186 DVYMATYGLSHTRNTKVGNDFVRGVSGGERKRVSIAEASLGGAKIQCWDNATRGLDSATALEFIRALKTSANILDTTPLV 265 (1394)
T ss_pred HHHHHHcCcccccCceeCCCcCCCCCcccchHHHHHHHHHhCCCEEEEeCCCCCcCHHHHHHHHHHHHHHHHhcCCEEEE
Confidence 7789999999999999999888999999999999999999999999999999999999999999999999874 899999
Q ss_pred EecCCCHHHHHhhhhhheeecCcEEEEECCCCccchHHHHHHhcCCCcccCCCCCCCccchhhhcccccc----------
Q 000808 885 TIHQPSIDIFESFDELFLMKRGGQEIYVGPLGRHSCHLIRYFEGIPGVENIKDGYNPATWMLEVTAKSQE---------- 954 (1275)
Q Consensus 885 ~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~~~~~~~~~~~f~~~~~~~~~~~~~npad~~~~~~~~~~~---------- 954 (1275)
++|||+.++++.||++++|++ |+++|+|++ +++.+||+++|. .||++.|||||++|+++++.+
T Consensus 266 ~~Hq~~~~i~~l~D~v~~L~~-G~iv~~G~~----~~~~~yF~~lG~--~~p~~~n~aDfl~~~~~~~~~~~~~~~e~~~ 338 (1394)
T TIGR00956 266 AIYQCSQDAYELFDKVIVLYE-GYQIYFGPA----DKAKQYFEKMGF--KCPDRQTTADFLTSLTSPAERQIKPGYEKKV 338 (1394)
T ss_pred EecCCCHHHHHhhceEEEEeC-CeEEEECCH----HHHHHHHHHcCC--CCCCCCChHHHHHhccChhhhhccccccccC
Confidence 999998889999999999996 799999998 578999999963 699999999999999875421
Q ss_pred chhhhhHHHHhhccHHHHHHHHHHHHhcCCC---------------CCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhhcC
Q 000808 955 LTLEIDFTDIYKGSELYRRNKALIEELSRPA---------------PGSKDLYFPTHYTQSFFMQCVACLWKQHWSYWRN 1019 (1275)
Q Consensus 955 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~q~~~l~~R~~~~~~R~ 1019 (1275)
.....++++.|+.|+.+++..+.++...... ...+.....+.+..|+|+|+++|++|++++.|||
T Consensus 339 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~l~~R~~~~~~Rd 418 (1394)
T TIGR00956 339 PRTPQEFETYWRNSPEYAQLMKEIDEYLDRCSESDTKEAYRESHVAKQSKRTRPSSPYTVSFSMQVKYCLARNFLRMKGN 418 (1394)
T ss_pred CCCHHHHHHHHHcCHHHHHHHHHHHHHhhhccchhhHHHHHHHHHhhhcccccCCCCCcCCHHHHHHHHHHHHHHHHhcC
Confidence 1123578899999988776555544321110 0001111234578899999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhcCCCCCCCchhhHHHHHhHHHHHHHHHHHHHhhhhhhhHHHhhHHHHhHccCCCCChH
Q 000808 1020 PPYTAVRFLFTTVIALTFGTMFWDMGTKMKRNQDLFNAMGSMYTAVFFLGAQYCSSVQPVVAVERAVFCREKGAGMYSAM 1099 (1275)
Q Consensus 1020 ~~~~~~~~~~~~~~~l~~g~~f~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~~~~~er~v~~rE~~~~~Y~~~ 1099 (1275)
|.++..|+++++++|+++|++||+++++ .++++++.|++||++++.++.++..+ +.+..||+||+||+.+++|+++
T Consensus 419 ~~~~~~r~~~~ii~~li~G~~F~~~~~~---~~~~~~r~g~lf~~~~~~~~~~~~~i-~~~~~eR~i~~re~~~~~Y~~~ 494 (1394)
T TIGR00956 419 PSFTLFMVFGNIIMALILSSVFYNLPKN---TSDFYSRGGALFFAILFNAFSSLLEI-ASMYEARPIVEKHRKYALYHPS 494 (1394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCC---chhHHHHHHHHHHHHHHHHHHHHHHH-HHHHhcCcceeeeccccccCHH
Confidence 9999999999999999999999999874 46788999999999999998887665 5566899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 000808 1100 PYAFAQVMIEIPYIFVLSSVYGIIVYAMIGFEWIAAKFFWYLFFMFFSLLYFTFYGMMTVAMTPNHHIAAIVSILFYGLW 1179 (1275)
Q Consensus 1100 ~y~~a~~~~~~p~~~~~~~~~~~i~Y~~~gl~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ 1179 (1275)
+|++|++++|+|+.++.+++|++|+|||+||++++++||+|+++++++.++++++++++++++|+..+|+.+++++++++
T Consensus 495 ay~la~~l~~iP~~~~~~~if~~i~Yfm~gl~~~~~~Ff~f~l~~~l~~~~~~~~~~~i~a~~~~~~~A~~~~~~~~~~~ 574 (1394)
T TIGR00956 495 ADAIASIISEIPFKIIESVVFNIILYFMVNFRRTAGRFFFYLLILFICTLAMSHLFRSIGAVTKTLSEAMTPAAILLLAL 574 (1394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhEEcCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCcCCCCccchhhHHhhhchHHHHHHHHHHHhhCCcccccC----CC------------------------CcHH
Q 000808 1180 NVFSGFVIPRTRIPLWWRWYYWANPVAWTMYGLVASQFGDVEDKME----SG------------------------ETVK 1231 (1275)
Q Consensus 1180 ~l~~G~~i~~~~ip~~~~w~~~~sp~~y~~~~l~~~~f~~~~~~~~----~~------------------------~~~~ 1231 (1275)
++|+||++|+++||+||+|++|+||++|+++|++.|||++..++|. .| .++.
T Consensus 575 ~lf~Gf~i~~~~mp~~~~W~~yisp~~yafeal~~nef~~~~~~C~~~~p~g~~y~~~~~~~~~C~~~g~~~g~~~~~G~ 654 (1394)
T TIGR00956 575 SIYTGFAIPRPSMLGWSKWIYYVNPLAYAFESLMVNEFHGRRFECSQYVPSGGGYDNLGVTNKVCTVVGAEPGQDYVDGD 654 (1394)
T ss_pred HHHcccccChhhccHHHHHHHHcCHHHHHHHHHHHhhhcCCcccccccccCCCCCCCCCccCccccCCCCcCCcccccHH
Confidence 9999999999999999999999999999999999999999888773 10 0456
Q ss_pred HHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhccc
Q 000808 1232 QFVRSYFDFKHDFLGVVAVVVAAFAVLFGVLFAVGIKRFNF 1272 (1275)
Q Consensus 1232 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~ 1272 (1275)
+|+...||++.+|+|+|++|+++|+++|+++++++++|+++
T Consensus 655 ~~L~~~~~~~~~~~w~n~gil~~~~v~f~~~~~l~l~~~~~ 695 (1394)
T TIGR00956 655 DYLKLSFQYYNSHKWRNFGIIIGFTVFFFFVYILLTEFNKG 695 (1394)
T ss_pred HHHHhcCCcccchhhHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 88887899999999999999999999999999999999874
No 8
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=5.2e-90 Score=911.96 Aligned_cols=591 Identities=23% Similarity=0.365 Sum_probs=495.9
Q ss_pred CCcEEEEEeEEEEEec-------cchh----------h-hcc---ccccccceeeceEEEEeCCeEEEEEcCCCCcHHHH
Q 000808 674 EPHSLTFDEVTYSVDM-------PKEM----------K-LQG---ILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTL 732 (1275)
Q Consensus 674 ~~~~~~~~~~~~~~~~-------~~~~----------~-~~~---~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTL 732 (1275)
+...+.|+|+++.... |... . ..+ .++.++.||+|||+.++|||+++|+||||||||||
T Consensus 128 ~~~~v~~~~l~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~k~~~~~IL~~vs~~i~~Ge~~~llGpnGSGKSTL 207 (1470)
T PLN03140 128 PTVEVRFEHLTVEADCYIGSRALPTLPNAARNIAESALGMLGINLAKKTKLTILKDASGIIKPSRMTLLLGPPSSGKTTL 207 (1470)
T ss_pred CCCeeEEeCCEEEEEecCCcccCCcHHHHHHHHHHHHHHHhccccCCCccceeccCCeEEEeCCeEEEEEcCCCCCHHHH
Confidence 3567999999887651 1100 0 001 12235779999999999999999999999999999
Q ss_pred HHHHHCCCCC-ceEEEEEEEcCccCCcccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCC-------CCHHHH---
Q 000808 733 MDVLAGRKTG-GYITGNITISGYPKKQETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPE-------VDSETQ--- 801 (1275)
Q Consensus 733 l~~l~g~~~~-~~~~G~i~~~g~~~~~~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~-------~~~~~~--- 801 (1275)
||+|+|+.++ ...+|+|.+||++......++.++||+|+|.+++.+||+|++.|++.++.+.. ...+++
T Consensus 208 Lk~LaG~l~~~~~~~G~I~~nG~~~~~~~~~~~i~yv~Q~d~~~~~lTV~EtL~f~a~~~~~~~~~~~~~~~~~~ek~~~ 287 (1470)
T PLN03140 208 LLALAGKLDPSLKVSGEITYNGYRLNEFVPRKTSAYISQNDVHVGVMTVKETLDFSARCQGVGTRYDLLSELARREKDAG 287 (1470)
T ss_pred HHHHhCCCCCCCcceeEEEECCEechhhcccceeEEecccccCCCcCcHHHHHHHHHHhcCCCCcccchhhcCHHHHhcc
Confidence 9999998653 24589999999987544346779999999999999999999999987763211 111111
Q ss_pred ---------------------HHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCC
Q 000808 802 ---------------------KMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 860 (1275)
Q Consensus 802 ---------------------~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgL 860 (1275)
+..++++++.+||.+++|+.+|+...++|||||||||+||++|+.+|+++||||||+||
T Consensus 288 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~L~~lGL~~~~~t~vg~~~~rglSGGerkRVsia~aL~~~p~vlllDEPTsGL 367 (1470)
T PLN03140 288 IFPEAEVDLFMKATAMEGVKSSLITDYTLKILGLDICKDTIVGDEMIRGISGGQKKRVTTGEMIVGPTKTLFMDEISTGL 367 (1470)
T ss_pred CCCchhhHHHHHHhhhhcchhhHHHHHHHHHcCCccccCceeCCccccCCCcccceeeeehhhhcCCCcEEEEeCCCcCc
Confidence 12357899999999999999999888999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHhh-CCCEEEEEecCCCHHHHHhhhhhheeecCcEEEEECCCCccchHHHHHHhcCCCcccCCCCC
Q 000808 861 DARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVGPLGRHSCHLIRYFEGIPGVENIKDGY 939 (1275)
Q Consensus 861 D~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~~~~~~~~~~~f~~~~~~~~~~~~~ 939 (1275)
|+.++.++++.|+++++ .|+|||+++|||+.+++++||++++|++ |+++|+||+ +++.+||+++|. .||++.
T Consensus 368 Ds~t~~~i~~~Lr~la~~~g~Tviis~Hqp~~~i~~lfD~vilL~~-G~ivy~G~~----~~~~~yF~~lGf--~cP~~~ 440 (1470)
T PLN03140 368 DSSTTYQIVKCLQQIVHLTEATVLMSLLQPAPETFDLFDDIILLSE-GQIVYQGPR----DHILEFFESCGF--KCPERK 440 (1470)
T ss_pred cHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHHhheEEEeeC-ceEEEeCCH----HHHHHHHHHcCC--CCCCCC
Confidence 99999999999999976 4899999999998899999999999996 799999998 678999999964 699999
Q ss_pred CCccchhhhcccccc-c-----------hhhhhHHHHhhccHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCcHHHHHHH
Q 000808 940 NPATWMLEVTAKSQE-L-----------TLEIDFTDIYKGSELYRRNKALIEELSRPAPGSKDLYFPTHYTQSFFMQCVA 1007 (1275)
Q Consensus 940 npad~~~~~~~~~~~-~-----------~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~ 1007 (1275)
|||||++|+++..+. . ....++++.|+.|..+++..+.++...............+.|..++|.|++.
T Consensus 441 n~ADFl~~v~s~~~~~~~~~~~~~p~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~s~~~q~~~ 520 (1470)
T PLN03140 441 GTADFLQEVTSKKDQEQYWADRNKPYRYISVSEFAERFKSFHVGMQLENELSVPFDKSQSHKAALVFSKYSVPKMELLKA 520 (1470)
T ss_pred ChHHHHHHhcCchhhhhhhhccCCccccCCHHHHHHHHHhcHHHHHHHHHHhhhhhhhhcccccccCCCCcCCHHHHHHH
Confidence 999999999875332 1 1234678889988877654443322111000011111224588999999999
Q ss_pred HHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCchhhHHHHHhHHHHHHHHHHHHHhhhhhhhHHHhhHHH
Q 000808 1008 CLWKQHWSYWRNPPYTAVRFLFTTVIALTFGTMFWDMGTKMKRNQDLFNAMGSMYTAVFFLGAQYCSSVQPVVAVERAVF 1087 (1275)
Q Consensus 1008 l~~R~~~~~~R~~~~~~~~~~~~~~~~l~~g~~f~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~~~~~er~v~ 1087 (1275)
|++|+++..+||+..+..|+++.+++|+++|++||+++.+..+..+.+.+.|++||++++.++.++.+ ++.++.||+||
T Consensus 521 ~~~R~~~~~~Rd~~~~~~r~~~~ii~ali~GsvF~~~~~~~~~~~~~~~~~g~lff~~l~~~~~~~~~-l~~~~~~r~vf 599 (1470)
T PLN03140 521 CWDKEWLLMKRNAFVYVFKTVQIIIVAAIASTVFLRTEMHTRNEEDGALYIGALLFSMIINMFNGFAE-LALMIQRLPVF 599 (1470)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHH-HHHHHhccchh
Confidence 99999999999999999999999999999999999998665444556677899999988888776655 47788999999
Q ss_pred HhHccCCCCChHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH
Q 000808 1088 CREKGAGMYSAMPYAFAQVMIEIPYIFVLSSVYGIIVYAMIGFEWIAAKFFWYLFFMFFSLLYFTFYGMMTVAMTPNHHI 1167 (1275)
Q Consensus 1088 ~rE~~~~~Y~~~~y~~a~~~~~~p~~~~~~~~~~~i~Y~~~gl~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1167 (1275)
+|||.+++|++++|++|++++++|+.++.+++|++|+|||+||++++++||+|+++++++.++++++++++++++|+..+
T Consensus 600 ~ker~~~~Y~~~ay~la~~l~~iP~~~i~~~if~~I~Y~m~Gl~~~~~~Ff~f~l~~~l~~~~~~~l~~~i~a~~~~~~~ 679 (1470)
T PLN03140 600 YKQRDLLFHPPWTFTLPTFLLGIPISIIESVVWVVITYYSIGFAPEASRFFKQLLLVFLIQQMAAGIFRLIASVCRTMII 679 (1470)
T ss_pred HHhhhccCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCcCCCCccchhhHHhhhchHHHHHHHHHHHhhCCcccc---cC-CCCcHHHHHHhhcCCCCc
Q 000808 1168 AAIVSILFYGLWNVFSGFVIPRTRIPLWWRWYYWANPVAWTMYGLVASQFGDVEDK---ME-SGETVKQFVRSYFDFKHD 1243 (1275)
Q Consensus 1168 a~~~~~~~~~~~~l~~G~~i~~~~ip~~~~w~~~~sp~~y~~~~l~~~~f~~~~~~---~~-~~~~~~~~~~~~~~~~~~ 1243 (1275)
|+.+++++++++++|+||++++++||+||+|++|+||++|+++|+++|||.+..+. |. .....|+.+++.+|++.+
T Consensus 680 A~~~~~~~~l~~~lf~Gf~i~~~~ip~w~~W~~yisp~~Ya~eal~~NEf~~~~~~~~~~~~~~~~~G~~~L~~~g~~~~ 759 (1470)
T PLN03140 680 ANTGGALVLLLVFLLGGFILPKGEIPNWWEWAYWVSPLSYGFNALAVNEMFAPRWMNKMASDNSTRLGTAVLNIFDVFTD 759 (1470)
T ss_pred HHHHHHHHHHHHHHHccceechHhCchHHHHHHHhCHHHHHHHHHHHHhccCccccCcccCCCCcccHHHHHHhcCcCcc
Confidence 99999999999999999999999999999999999999999999999999776543 21 122345555578999754
Q ss_pred --chhHHHHHHHHHHHHHHHHHHHHHhhccc
Q 000808 1244 --FLGVVAVVVAAFAVLFGVLFAVGIKRFNF 1272 (1275)
Q Consensus 1244 --~~~~~~~~l~~~~~~~~~~~~~~l~~~~~ 1272 (1275)
|.|+++++|+||+++|+++++++|++++.
T Consensus 760 ~~~~w~~~~iL~~~~v~f~~l~~l~L~~~~~ 790 (1470)
T PLN03140 760 KNWYWIGVGALLGFTILFNVLFTLALTYLNP 790 (1470)
T ss_pred ccchhhhHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 56999999999999999999999999873
No 9
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.6e-85 Score=804.56 Aligned_cols=562 Identities=25% Similarity=0.446 Sum_probs=498.7
Q ss_pred ccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCc-eEEEEEEEcCccCCcccccceEEEeccCCCCCCCCCH
Q 000808 702 KLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YITGNITISGYPKKQETFTRISGYCEQNDIHSPFVTV 780 (1275)
Q Consensus 702 ~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~-~~~G~i~~~g~~~~~~~~~~~~~~v~q~~~~~~~ltv 780 (1275)
+..+|+|+|+.++||+++.++||+||||||||++|+|..+.. ...|+|.+||++.+....++.++|++|+|.|+|.|||
T Consensus 127 ~~~il~~~sg~~~pg~m~lvLG~pgsG~ttllkal~g~~~~~~~~~~~isy~G~~~~e~~~~~~~aY~~e~DvH~p~lTV 206 (1391)
T KOG0065|consen 127 KIQILKDISGIIKPGEMTLVLGPPGSGKTTLLKALAGKLDNFLKSSGEITYNGHDLKEFVPKKTVAYNSEQDVHFPELTV 206 (1391)
T ss_pred cceeecCcceeEcCCceEEEecCCCCchHHHHHHHhCCCcccccCCCceeECCCcccccccCceEEeccccccccceeEE
Confidence 457999999999999999999999999999999999975432 2357999999998765447889999999999999999
Q ss_pred HHHHHHHHhccCCCC----CCHHHHH-HHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeC
Q 000808 781 YESLLYSAWLRLPPE----VDSETQK-MFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDE 855 (1275)
Q Consensus 781 ~e~l~~~~~l~~~~~----~~~~~~~-~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~~l~~~p~illlDE 855 (1275)
+|+|.|+++++.+.. .++.++. +..+.+++.+||.+|+|+++|+...||+||||||||++|.+++.+|+++++||
T Consensus 207 reTldFa~rck~~~~r~~~~~R~e~~~~~~d~~lkilGL~~~~dT~VGnd~~RGvSGGerKRvsi~E~~v~~~~~~~~De 286 (1391)
T KOG0065|consen 207 RETLDFAARCKGPGSRYDEVSRREKLAAMTDYLLKILGLDHCADTLVGNDMVRGVSGGERKRVSIGEMLVGPASILFWDE 286 (1391)
T ss_pred eehhhHHHhccCCccccccccHHHHHHHHHHHHHHHhCchhhccceecccccccccCcccceeeeeeeeecCcceeeeec
Confidence 999999999998732 2222222 25678999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhhhhheeecCcEEEEECCCCccchHHHHHHhcCCCccc
Q 000808 856 PTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVGPLGRHSCHLIRYFEGIPGVEN 934 (1275)
Q Consensus 856 PtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~~~~~~~~~~~f~~~~~~~~ 934 (1275)
+|+|||+.++.++.+.||++++. +.|++++.|||+.+++++||+|++|.+ |+++|+||. +++++||+++|. .
T Consensus 287 ~t~GLDSsTal~iik~lr~~a~~~~~t~~vsi~Q~s~~~~~lFD~v~lL~e-G~~iy~Gp~----d~~~~yFe~~Gf--~ 359 (1391)
T KOG0065|consen 287 ITRGLDSSTAFQIIKALRQLAHITGATALVSILQPSPEIYDLFDDVILLSE-GYQIYQGPR----DEVLPYFEDMGF--K 359 (1391)
T ss_pred ccccccHHHHHHHHHHHHHHHhhhcceEEEEeccCChHHHHhhhheeeeec-cceEEeccH----HHHHHHHHhcCc--c
Confidence 99999999999999999999864 899999999999999999999999997 799999998 578999999864 6
Q ss_pred CCCCCCCccchhhhccccccc-----------h-hhhhHHHHhhccHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCcHH
Q 000808 935 IKDGYNPATWMLEVTAKSQEL-----------T-LEIDFTDIYKGSELYRRNKALIEELSRPAPGSKDLYFPTHYTQSFF 1002 (1275)
Q Consensus 935 ~~~~~npad~~~~~~~~~~~~-----------~-~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1002 (1275)
||+..++|||+.++++..++. . ...++++.|..++.+++....++.........+.....+.|..|+|
T Consensus 360 cP~r~~~ADfLt~vts~k~~~~~~~~~~~~~~~~~~~ef~~~~~~s~~~~~l~~~l~~~~~~~k~~~~al~s~~y~v~~~ 439 (1391)
T KOG0065|consen 360 CPPRKGTADFLTEVTSKKDQEQYWNKRSKPYPYTSVSEFAEYFLNSEDYAKLKKELSKPYDKSKKHKAALVSSKYSVPYW 439 (1391)
T ss_pred CCCccCHHHHHHHhhcCccccccccccCCCcccCCHHHHHHHHhcchhhHHHHHHhcchhhhhhccchhhcCCceeccHH
Confidence 999999999999999833211 1 1257899999999888765544332222222222333467899999
Q ss_pred HHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCchhhHHHHHhHHHHHHHHHHHHHhhhhhhhHHH
Q 000808 1003 MQCVACLWKQHWSYWRNPPYTAVRFLFTTVIALTFGTMFWDMGTKMKRNQDLFNAMGSMYTAVFFLGAQYCSSVQPVVAV 1082 (1275)
Q Consensus 1003 ~q~~~l~~R~~~~~~R~~~~~~~~~~~~~~~~l~~g~~f~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~~~~~~~~~~~ 1082 (1275)
.|++.|+.|.++.++||..++..++++.+++|+++|++|++.+. .+..+.+.+.|++||++++..+.++.++ +...+
T Consensus 440 ~qvk~c~~R~f~l~k~n~~~~~~~~~~~~i~ali~gslF~~~~~--~t~~~~~~~~~~lffsll~~~f~~laEi-~~~~~ 516 (1391)
T KOG0065|consen 440 EQVKACTIREFLLMKRNYFYYVFKTVQLVIQALITGSLFYRTPM--STTSGGYSRGGALFFALLFNLFNGLAEI-ALTFQ 516 (1391)
T ss_pred HHHHHHHHHHHHHHhCCceEEEhHHHHHHHHHHHHhhheeeccC--cccccchhhhhHHHHHHHHHHHHhHHHH-HHHHh
Confidence 99999999999999999999999999999999999999999983 4566788999999999999998888777 45567
Q ss_pred hhHHHHhHccCCCCChHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 000808 1083 ERAVFCREKGAGMYSAMPYAFAQVMIEIPYIFVLSSVYGIIVYAMIGFEWIAAKFFWYLFFMFFSLLYFTFYGMMTVAMT 1162 (1275)
Q Consensus 1083 er~v~~rE~~~~~Y~~~~y~~a~~~~~~p~~~~~~~~~~~i~Y~~~gl~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 1162 (1275)
.||||+|||...+|++++|.++.+++++|+.++.+++|.+|+||++||.++|++||.++++++++..|++++++++++++
T Consensus 517 ~~pv~~Khr~~~fY~p~A~al~s~l~~~P~~~i~~~vf~iI~Yfl~gl~~~A~rFF~~fL~lf~~~~~~s~lFr~ia~l~ 596 (1391)
T KOG0065|consen 517 RLPVFYKHRDLSFYPPWAEALASTLLKIPSSFIESVVFVIITYFLIGLKRNAGRFFIQFLFLFLCQFCMSGLFRFIASLS 596 (1391)
T ss_pred hcchHHHhhcccccChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHHhcCCCcCCCCccchhhHHhhhchHHHHHHHHHHHhhCCcccccC-CCC-------------
Q 000808 1163 PNHHIAAIVSILFYGLWNVFSGFVIPRTRIPLWWRWYYWANPVAWTMYGLVASQFGDVEDKME-SGE------------- 1228 (1275)
Q Consensus 1163 ~~~~~a~~~~~~~~~~~~l~~G~~i~~~~ip~~~~w~~~~sp~~y~~~~l~~~~f~~~~~~~~-~~~------------- 1228 (1275)
++...|+.++++.+.+..+++||+||.++||+||+|++|+||+.|++++++.|||++.+++|+ .||
T Consensus 597 ~t~~~An~~g~~~~L~i~m~~Gf~Ip~~~m~~W~~Wi~yinPl~Y~fesl~~NEF~~~~~~c~p~gp~y~n~~~~~~~c~ 676 (1391)
T KOG0065|consen 597 RTLSIANLIGGILLLVLFMYGGFVIPKKDMPPWFRWIAYINPLMYAFESLMSNEFHGRRWPCSPSGPAYDNISIENKVCA 676 (1391)
T ss_pred chHHHHhhHhHHHHHHHHHHcceeeeccccchHHHHHHHHCHHHHHHHHHHHhhhhcccCCCCCCCCcccccccccccch
Confidence 999999999999999999999999999999999999999999999999999999999999996 111
Q ss_pred -----------cHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhcccc
Q 000808 1229 -----------TVKQFVRSYFDFKHDFLGVVAVVVAAFAVLFGVLFAVGIKRFNFQ 1273 (1275)
Q Consensus 1229 -----------~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~ 1273 (1275)
.+.+|+...|++++.|.|+++++++||.++|.++..+++.|++.-
T Consensus 677 ~~~~~~G~~~v~g~~~l~~~~~y~~~~~Wr~~gillgf~v~f~~~~~ia~~yl~p~ 732 (1391)
T KOG0065|consen 677 ATGATLGNDYVSGRDYLKVQYQYEYKWYWRNFGILLGFTVFFNFVFLIALEYLKPL 732 (1391)
T ss_pred hhccccCceEEecccccccccccccceeEeehhHHHHHHHHHHHHHHHHHHhcCcc
Confidence 246788888889999999999999999999999999999999853
No 10
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2e-75 Score=739.16 Aligned_cols=760 Identities=21% Similarity=0.277 Sum_probs=431.3
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCccccceEEEeccccccCCCCCHHHHHHHHHhccCCCCc
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFVPQRTAAYISQHDVHIGEMTVRETLAFSARCQGVGSR 80 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~ 80 (1275)
++||+||.||||||||.+|+|+++.. +|+|.++| .++||||++|++ +.||||||.|+.++. .++
T Consensus 549 lvaVvG~vGsGKSSLL~AiLGEm~~~---sG~v~v~g----------siaYv~Q~pWI~-ngTvreNILFG~~~d--~~r 612 (1381)
T KOG0054|consen 549 LVAVVGPVGSGKSSLLSAILGEMPKL---SGSVAVNG----------SVAYVPQQPWIQ-NGTVRENILFGSPYD--EER 612 (1381)
T ss_pred EEEEECCCCCCHHHHHHHHhcCcccc---cceEEEcC----------eEEEeccccHhh-CCcHHHhhhcCcccc--HHH
Confidence 47999999999999999999999864 99999999 599999998865 679999999976543 133
Q ss_pred chhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhhHHHHHh
Q 000808 81 YDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEMMV 160 (1275)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~al~ 160 (1275)
|+.+- ++|+++++ ++ -|+.++.|.||++++ +|||||||||+||||+|
T Consensus 613 Y~~Vi---------------------~aC~L~~D---------le--~Lp~GD~TeIGErGi-nLSGGQKqRIsLARAVY 659 (1381)
T KOG0054|consen 613 YDKVI---------------------KACALKKD---------LE--ILPFGDLTEIGERGI-NLSGGQKQRISLARAVY 659 (1381)
T ss_pred HHHHH---------------------HHccCHhH---------Hh--hcCCCCcceecCCcc-CCcHhHHHHHHHHHHHh
Confidence 33222 33332211 11 288999999998766 89999999999999999
Q ss_pred cCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhhHHH---HH
Q 000808 161 GPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVLD---FF 237 (1275)
Q Consensus 161 ~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~~~~---~f 237 (1275)
+++||++||+|+|++|++++.+|++.+... ..+++|++.++| ..+..+.+|+|++|++|+|...|+++|+.+ .|
T Consensus 660 ~~adIYLLDDplSAVDahvg~~if~~ci~~--~L~~KT~ILVTH-ql~~L~~ad~Iivl~~G~I~~~Gty~el~~~~~~~ 736 (1381)
T KOG0054|consen 660 QDADIYLLDDPLSAVDAHVGKHIFEECIRG--LLRGKTVILVTH-QLQFLPHADQIIVLKDGKIVESGTYEELLKSGGDF 736 (1381)
T ss_pred ccCCEEEEcCcchhhhHhhhHHHHHHHHHh--hhcCCEEEEEeC-chhhhhhCCEEEEecCCeEecccCHHHHHhcchhH
Confidence 999999999999999999999999877643 234445555566 557889999999999999999999999874 22
Q ss_pred HhCCCCCCCCCChhhHHHhhcCchhhhhhhhccCCCCccCCHHHHHHHHhhchhhHHHHHhhcCCcccCCCCCccccccc
Q 000808 238 ESMGFKCPERKGVADFLQEVTSRKDQQQYWVHKEMPYRFVTAQEFSEAFQSFTVGQKLADELRTPFDKCKSHPAALTTKM 317 (1275)
Q Consensus 238 ~~~G~~~p~~~~~ad~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (1275)
+++ +.+. +. +..........+ ......+ .+. +.........++ ....+..+..........
T Consensus 737 ~~l-------------~~~~-~~-~~~~~~~~~~~~-~~~~~~~-~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~ee~~ 797 (1381)
T KOG0054|consen 737 AEL-------------AHEE-ES-EQEEEASEKDLE-SGESSRE-SES-RSLESLSSEEEK-SKDEKEEEDKLVQEEERE 797 (1381)
T ss_pred HHH-------------hhcc-ch-hhcccccccccc-ccccccc-hhh-hhhhhhcccccc-cccccchhhHHHHHHHHh
Confidence 221 0000 00 000000000000 0000000 000 000000000000 000000000000000000
Q ss_pred cccCHHHHHHHHHHHHHHHHhcChHHHHH-HHHHHHHHHHHHHH---hhccccCCCCCc---CCccceehHHHH----HH
Q 000808 318 YGVGKKELLKANISRELLLMKRNSFVYIF-KLTQLSSMALVSMT---LFFRTKMHKDSV---SDGGIYVGATFF----AV 386 (1275)
Q Consensus 318 ~~~~~~~~~~~~~~r~~~~~~r~~~~~~~-~~~~~~~~~l~~g~---l~~~~~~~~~~~---~~~~~~~g~~f~----~i 386 (1275)
.+.-.+..++.. +.. ........+ .+.........++. +-++.+...... .+...+.+.... ..
T Consensus 798 ~G~v~~~vY~~Y----~~a-~~g~~~~~~~~~~~v~~~~~~~~~~~WLs~W~~~~~~~~~~~~~~~~~~~vY~~l~~~~~ 872 (1381)
T KOG0054|consen 798 TGKVSWSVYKKY----IKA-AGGFLLVLLILLLFVLTQVLQIASNYWLSYWTDDGEDNGTTTVSTSFYLGVYALLGVASS 872 (1381)
T ss_pred cCEeeHHHHHHH----HHh-cccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCcchHHHHHHHHHHHHH
Confidence 111111111111 111 000111110 11111111111111 212222211111 122222222211 11
Q ss_pred HHHHHhhhHHHHHHhhcchhHHHhhhcCCcchhHHHHHHHHHHhhHHHHHHHHHHhhhhhcccccCChhHHHHHHH----
Q 000808 387 MMTMFNGMSDISMTIAKLPVFYKQRDLRFYAAWAYALPAWILKIPISFLEVAVWVFLTYYVIGFDPNIGRLFKQFL---- 462 (1275)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~v~~~~r~~~~y~~~~y~l~~~i~~~p~~~~~~~~~~~i~Y~l~gl~~~~g~~~~~~l---- 462 (1275)
+..+..++.....+......+ +-.+.+.+.+.|++|++++ +.||++|||.
T Consensus 873 ~~~~~rs~~~~~~~l~aS~~L------------h~~ml~~Ilrapm~FFdtT--------------P~GRILNRFSkD~~ 926 (1381)
T KOG0054|consen 873 LLTLLRSFLFAKGGLKASRKL------------HDKLLNSILRAPMSFFDTT--------------PTGRILNRFSKDID 926 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHHhCcchhcCCC--------------CccchhhhcccchH
Confidence 112222222222222222122 2235667888899986643 5899999993
Q ss_pred --HHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccccccCCCccchhhhhHhhCHHHHHHHHHHHhHcCCC
Q 000808 463 --LLLLVNQMASALFRFIAAAGRNMIVAMSFGSFVLLVLFAFGGFVLSRDDIKKWWVWGYWCSPMMYAQNAIVANEFFGH 540 (1275)
Q Consensus 463 --~~~l~~~~~~~l~~~i~~~~~~~~ia~~~~~~~~~~~~l~~gf~i~~~~i~~~~~w~~~~sp~~y~~~al~~~ef~~~ 540 (1275)
...+...+...+..++..++.-..++.....+++.+.++ .++||.-..+|.-.+....+..+.
T Consensus 927 ~vD~~Lp~~~~~~~~~~~~~l~~~~vi~~~~P~fli~~~pl---------------~v~~~~~~~~Y~~tsReLkRLesi 991 (1381)
T KOG0054|consen 927 TVDVLLPFTLEFFLQSLLNVLGILVVISYVTPWFLIAIIPL---------------GVIYYFVQRYYLATSRELKRLESI 991 (1381)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHHHHH---------------HHHHHHHHHHHHHHhHHHHHhhhc
Confidence 112222222222222222211122222222222222222 234555666777777788888887
Q ss_pred ccccccCCCcccc-hHHHhhhcCcccC--------------Cc------chhHHHHH-HHHHHHHHHHHHHHHHhhcccC
Q 000808 541 SWRKFTSNSNETL-GVQVLKSRGFFPH--------------AY------WYWLGLGA-TIGFVLLFNIGFTLSLTFLNQF 598 (1275)
Q Consensus 541 ~~~~~~~~~~~~~-g~~~l~~~~~~~~--------------~~------~~w~~~~~-~~~~~~~~~i~~~~~l~~~~~~ 598 (1275)
+.++..++..++. |...+++++.... .+ ..|+++.. +++.++++.+.....+.....
T Consensus 992 tRSPi~sh~~Etl~GlsTIRAf~~~~rf~~~~~~~~D~~~~~~f~~~~a~RWla~Rle~ig~~~v~~~al~~vl~~~~~- 1070 (1381)
T KOG0054|consen 992 TRSPIYSHFSETLQGLSTIRAFGKEERFIQENDELIDENSRAFFLSISANRWLAVRLELLGNLVVLIAALFAVLLPSGL- 1070 (1381)
T ss_pred ccchHHHhHHHHhcCcceeeeccccHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCC-
Confidence 7777776665544 6666666553221 11 12554432 222222222222111111100
Q ss_pred CCCcceeccCCcccccCCcCCCCcccccCCCCCCCCCCCCcccccccchhhhhcccccccccccCccCCCcccCCCCcEE
Q 000808 599 EKPRAVISDESESNDLGNRIGGTAQLSTHGSNSSHKTCSESEDITVKDSFSQLLSQREVTVGAIQPKKRGMVLPFEPHSL 678 (1275)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (1275)
..+..+....+.+-. +.+..++.+......+.....+|+ ...|...+++.+.. ....+++..+| ..+.+
T Consensus 1071 ~~~g~vGLslsyal~----lt~~l~~~vR~~~elEn~m~SVER---v~eY~~~~~E~p~~---~~~~~pp~~WP-~~G~I 1139 (1381)
T KOG0054|consen 1071 ISPGLVGLSLSYALQ----LTGLLQWLVRQSSELENNMVSVER---VLEYTDIPSEAPLE---IEESRPPPSWP-SKGEI 1139 (1381)
T ss_pred CCcchHHHHHHHHHH----HHHHHHHHHHHHHHHHhcchhhhH---HHHHhcCCCCCCCC---CcCCCCCCCCC-CCCeE
Confidence 001111000000000 001111111111111111222222 12222222221100 11111222344 34689
Q ss_pred EEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCCc
Q 000808 679 TFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 758 (1275)
Q Consensus 679 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 758 (1275)
+|+|++.+|.. +-..||||||++|+|||++||+|++|||||||+++|.+... +.+|+|.|||.++.+
T Consensus 1140 ~f~~~~~RYrp-----------~lp~VLk~is~~I~p~eKVGIVGRTGaGKSSL~~aLFRl~e--~~~G~I~IDgvdI~~ 1206 (1381)
T KOG0054|consen 1140 EFEDLSLRYRP-----------NLPLVLKGISFTIKPGEKVGIVGRTGAGKSSLILALFRLVE--PAEGEILIDGVDISK 1206 (1381)
T ss_pred EEEEeEEEeCC-----------CCcchhcCceEEEcCCceEEEeCCCCCCHHHHHHHHHHhcC--ccCCeEEEcCeeccc
Confidence 99999988852 23469999999999999999999999999999999998765 358999999999865
Q ss_pred ---ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCcccccccc------CCCCCC
Q 000808 759 ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVG------LPGESG 829 (1275)
Q Consensus 759 ---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~------~~~~~~ 829 (1275)
..+|++++.+||||.+|. -|+|+|| ++..+..++.+.++||..+|.+...+..+ .+++.+
T Consensus 1207 igL~dLRsrlsIIPQdPvLFs-GTvR~NL----------DPf~e~sD~~IW~ALe~~~Lk~~v~~~p~~Ld~~v~egG~N 1275 (1381)
T KOG0054|consen 1207 IGLHDLRSRLSIIPQDPVLFS-GTVRFNL----------DPFDEYSDDEIWEALERCQLKDVVSSLPGGLDSEVSEGGEN 1275 (1381)
T ss_pred ccHHHHHhcCeeeCCCCceec-Ccccccc----------CcccccCHHHHHHHHHHhChHHHHhhCCcCCCceecCCCcc
Confidence 457888999999999986 5888887 33444556678899998888765433322 234568
Q ss_pred CCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcEE
Q 000808 830 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQE 909 (1275)
Q Consensus 830 lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~ 909 (1275)
+|-||||.+|+||||+++++||+|||+|+++|+++...|+++||+..+ +||||++.|+.+ ....+|||+||++ |++
T Consensus 1276 ~SvGQRQLlCLARALLr~skILvLDEATAsVD~~TD~lIQ~tIR~~F~-dcTVltIAHRl~--TVmd~DrVlVld~-G~v 1351 (1381)
T KOG0054|consen 1276 FSVGQRQLLCLARALLRKSKILVLDEATASVDPETDALIQKTIREEFK-DCTVLTIAHRLN--TVMDSDRVLVLDA-GRV 1351 (1381)
T ss_pred CChHHHHHHHHHHHHhccCCEEEEecccccCChHHHHHHHHHHHHHhc-CCeEEEEeeccc--hhhhcCeEEEeeC-CeE
Confidence 999999999999999999999999999999999999999999999775 799999999987 3456799999996 799
Q ss_pred EEECCCCc
Q 000808 910 IYVGPLGR 917 (1275)
Q Consensus 910 ~~~g~~~~ 917 (1275)
+.+|.|.+
T Consensus 1352 ~EfdsP~~ 1359 (1381)
T KOG0054|consen 1352 VEFDSPAE 1359 (1381)
T ss_pred eecCChHH
Confidence 99999843
No 11
>KOG0061 consensus Transporter, ABC superfamily (Breast cancer resistance protein) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.4e-71 Score=683.22 Aligned_cols=548 Identities=30% Similarity=0.491 Sum_probs=457.8
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCccccceEEEeccccccCCCCCHHHHHHHHHhccCCCCc
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFVPQRTAAYISQHDVHIGEMTVRETLAFSARCQGVGSR 80 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~ 80 (1275)
++||||||||||||||++|+|+..++...+|+|++||++.+....++.+|||.|+|.+++++||+|++.|+|+++.+..
T Consensus 58 l~AimG~SGsGKtTLL~~Lagr~~~~~~~~G~ilvNG~~~~~~~~~~~s~yV~QdD~l~~~LTV~EtL~f~A~lrlp~~- 136 (613)
T KOG0061|consen 58 LLAIMGPSGSGKTTLLNALAGRLNGGLKLSGEILLNGRPRDSRSFRKISGYVQQDDVLLPTLTVRETLRFSALLRLPSS- 136 (613)
T ss_pred EEEEECCCCCCHHHHHHHHhccccCCCcceEEEEECCccCchhhhhheeEEEcccccccccccHHHHHHHHHHhcCCCC-
Confidence 5899999999999999999999987557899999999888777788899999999999999999999999999875421
Q ss_pred chhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhhHHHHHh
Q 000808 81 YDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEMMV 160 (1275)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~al~ 160 (1275)
...++.+.+++++++.+||.+|+||.||+...+++||||||||+||..|+
T Consensus 137 ------------------------------~~~~~k~~~V~~vi~~LgL~~~~~t~ig~~~~rgiSGGErkRvsia~Ell 186 (613)
T KOG0061|consen 137 ------------------------------LSKEEKRERVEEVISELGLEKCADTLIGNPGIRGLSGGERKRVSIALELL 186 (613)
T ss_pred ------------------------------CCHHHHHHHHHHHHHHcCChhhccceecCCCCCccccchhhHHHHHHHHH
Confidence 11223445789999999999999999999888999999999999999999
Q ss_pred cCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhhHHHHHHhC
Q 000808 161 GPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVLDFFESM 240 (1275)
Q Consensus 161 ~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~~~~~f~~~ 240 (1275)
.||+||+|||||||||+.++.++++.|+++++. ++++|+++|||+.+++++||++++|++|+++|+|+++++.+||++.
T Consensus 187 ~~P~iLflDEPTSGLDS~sA~~vv~~Lk~lA~~-grtVi~tIHQPss~lf~lFD~l~lLs~G~~vy~G~~~~~~~ff~~~ 265 (613)
T KOG0061|consen 187 TDPSILFLDEPTSGLDSFSALQVVQLLKRLARS-GRTVICTIHQPSSELFELFDKLLLLSEGEVVYSGSPRELLEFFSSL 265 (613)
T ss_pred cCCCEEEecCCCCCcchhhHHHHHHHHHHHHhC-CCEEEEEEeCCcHHHHHHHhHhhhhcCCcEEEecCHHHHHHHHHhC
Confidence 999999999999999999999999999999986 8999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCChhhHHHhhcCchhhhhhhhccCCCCccCCHHHHHHHHhhchhhHHHHHhhcCCcccCCCCCcccccccccc
Q 000808 241 GFKCPERKGVADFLQEVTSRKDQQQYWVHKEMPYRFVTAQEFSEAFQSFTVGQKLADELRTPFDKCKSHPAALTTKMYGV 320 (1275)
Q Consensus 241 G~~~p~~~~~ad~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (1275)
|++||++.||+||+.++.+.++......+. .......+.++......+..+......... .........
T Consensus 266 G~~~P~~~Npadf~l~l~s~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~ 334 (613)
T KOG0061|consen 266 GFPCPELENPADFLLDLLSVDSGTRELEEA------VRIAKLINKFSQTDNLKKTLEALEKSLSTS-----KKVEIGTSP 334 (613)
T ss_pred CCCCCCcCChHHHHHHHHccCCCchhHHhH------HHHHHHhhhccccchhhhhHHHHhhhcccc-----cccccccCC
Confidence 999999999999999987643110000000 000000000000000000000000000000 000011167
Q ss_pred CHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhccccCCCCCcCCccceehHHHHHHHHHHHhhhH-HHHH
Q 000808 321 GKKELLKANISRELLLMKRNSFVYIFKLTQLSSMALVSMTLFFRTKMHKDSVSDGGIYVGATFFAVMMTMFNGMS-DISM 399 (1275)
Q Consensus 321 ~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~~~~g~~f~~i~~~~~~~~~-~~~~ 399 (1275)
+++.|+..+.+|.+....|++.....+..+...+++++|.+|++.+.... ......|+.++.+.+..+..+. .+..
T Consensus 335 s~~~q~~~L~~R~~~~~~R~~~~~~~r~~~~~~~~~~lg~~~~~~~~~~~---~~~~~~g~~~~~~~~~~f~~~~~~i~~ 411 (613)
T KOG0061|consen 335 SWWTQFKILLKRSLKNIRRDPSLLLLRLIQSLVTGLLLGLLYLNLGNDAK---GIQNRLGLFFFILSFMTFLSMFGAVPV 411 (613)
T ss_pred cHHHHHHHHHHHHhHHHhhcHHHHHHHHHHHHHHHHHHHHHhhCCCCchH---HHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 89999999999999999999999999999999999999999999854332 2225677888887777666665 4677
Q ss_pred HhhcchhHHHhhhcCCcchhHHHHHHHHHHhhHHHHHHHHHHhhhhhcccccCChhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000808 400 TIAKLPVFYKQRDLRFYAAWAYALPAWILKIPISFLEVAVWVFLTYYVIGFDPNIGRLFKQFLLLLLVNQMASALFRFIA 479 (1275)
Q Consensus 400 ~~~~~~v~~~~r~~~~y~~~~y~l~~~i~~~p~~~~~~~~~~~i~Y~l~gl~~~~g~~~~~~l~~~l~~~~~~~l~~~i~ 479 (1275)
...++++|.||+..++|+.++|++++.+.++|+.++.+++|+.++|||+|++++..+|+.+.++.++...++++++.+++
T Consensus 412 f~~e~~~f~rE~~~~~Y~~s~y~la~~l~~lP~~~i~~~if~~i~Y~m~gl~~~~~~f~~~~l~~~~~~~~a~s~~~~i~ 491 (613)
T KOG0061|consen 412 FPQERPIFLRETSSGLYRLSSYYLAKTLAELPFLLVLSIIFSSIVYWMVGLNPGLSRFLYFLLIILLSSLVAESLGLFIS 491 (613)
T ss_pred hHHHHHHHHHHHhcCchhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCChHHHHHHHHHHHHHHHHhccccccCCCccchhhhhHhhCHHHHHHHHHHHhHcCCCccccccC--CCcccchHHH
Q 000808 480 AAGRNMIVAMSFGSFVLLVLFAFGGFVLSRDDIKKWWVWGYWCSPMMYAQNAIVANEFFGHSWRKFTS--NSNETLGVQV 557 (1275)
Q Consensus 480 ~~~~~~~ia~~~~~~~~~~~~l~~gf~i~~~~i~~~~~w~~~~sp~~y~~~al~~~ef~~~~~~~~~~--~~~~~~g~~~ 557 (1275)
+..++...+..+++++.+.+++++||+++.+.+|.||.|+.|+|+.+|++|+++.|+|.+....|... ..+...|.++
T Consensus 492 ~~~~~~~~a~~~~~~~~~~f~l~~G~fi~~~~ip~~~~w~~~~S~~ry~~e~l~~n~~~~~~~~~~~~~~~~~~~~~~~~ 571 (613)
T KOG0061|consen 492 AIVPNLSLATSLGPVLLLPFLLFGGFFINFDSIPKYFRWISYLSYFRYAFEALLINQFSGGSSRCFLSGNLCCESTGEDV 571 (613)
T ss_pred HhccchhheeehHHHHHHHHHHHhhhhcCcccccHHHHHHHHHhHHHHHHHHHHHHHhhccccccccCcCCcccccHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999744445443 3456678899
Q ss_pred hhhcCcccCCcchhHHHHHHHHHHHHHHHHHHHHHhhcc
Q 000808 558 LKSRGFFPHAYWYWLGLGATIGFVLLFNIGFTLSLTFLN 596 (1275)
Q Consensus 558 l~~~~~~~~~~~~w~~~~~~~~~~~~~~i~~~~~l~~~~ 596 (1275)
+...++...+ .|.++.+++++.++|++++++++++..
T Consensus 572 l~~~~~~~~~--~~~~l~~l~~~~~~~~il~y~~L~~~~ 608 (613)
T KOG0061|consen 572 LKQLGFEDSS--FWLDLLVLLAFIVFFRVLGYLALRFRV 608 (613)
T ss_pred HHhcCCcccc--cchhHHHHHHHHHHHHHHHHHHHHhhc
Confidence 9988886654 588999999999999999999887653
No 12
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=6.6e-73 Score=698.11 Aligned_cols=778 Identities=21% Similarity=0.266 Sum_probs=407.9
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCccc---cceEEEeccccccCCCCCHHHHHHHHHhccCC
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFVP---QRTAAYISQHDVHIGEMTVRETLAFSARCQGV 77 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~~~---~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~ 77 (1275)
.+||||||||||||++++|.+.++|+ +|+|.++|.++++.+. |+++|.|.|+|.+| +.||+|||.|+.+-
T Consensus 381 ~valVG~SGsGKST~i~LL~RfydP~---~G~V~idG~di~~~~~~~lr~~iglV~QePvlF-~~tI~eNI~~G~~d--- 453 (1228)
T KOG0055|consen 381 TVALVGPSGSGKSTLIQLLARFYDPT---SGEVLIDGEDIRNLNLKWLRSQIGLVSQEPVLF-ATTIRENIRYGKPD--- 453 (1228)
T ss_pred EEEEECCCCCCHHHHHHHHHHhcCCC---CceEEEcCccchhcchHHHHhhcCeeeechhhh-cccHHHHHhcCCCc---
Confidence 37999999999999999999999998 9999999999877653 57899999999766 56999999995321
Q ss_pred CCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhhHHH
Q 000808 78 GSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGE 157 (1275)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~ 157 (1275)
...+...+++.+ .+..--...|+++.+|.+|++++ .|||||||||+|||
T Consensus 454 ----------------------at~~~i~~a~k~--------ana~~fi~~lp~g~~T~vge~g~-qLSGGQKQRIAIAR 502 (1228)
T KOG0055|consen 454 ----------------------ATREEIEEAAKA--------ANAHDFILKLPDGYDTLVGERGV-QLSGGQKQRIAIAR 502 (1228)
T ss_pred ----------------------ccHHHHHHHHHH--------ccHHHHHHhhHHhhcccccCCCC-CCChHHHHHHHHHH
Confidence 111112222211 11112223489999999998777 59999999999999
Q ss_pred HHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhhHHHHH
Q 000808 158 MMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVLDFF 237 (1275)
Q Consensus 158 al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~~~~~f 237 (1275)
||+.+|+|||||||||+||+.++..+.+.|.+.. .++|+|+ +.|..+.+.+ +|+|++|++|+|++.|+++|++..
T Consensus 503 alv~~P~ILLLDEaTSaLD~~se~~Vq~ALd~~~--~grTTiv-VaHRLStIrn-aD~I~v~~~G~IvE~G~h~ELi~~- 577 (1228)
T KOG0055|consen 503 ALVRNPKILLLDEATSALDAESERVVQEALDKAS--KGRTTIV-VAHRLSTIRN-ADKIAVMEEGKIVEQGTHDELIAL- 577 (1228)
T ss_pred HHHhCCCEEEecCcccccCHHHHHHHHHHHHHhh--cCCeEEE-Eeeehhhhhc-cCEEEEEECCEEEEecCHHHHHhc-
Confidence 9999999999999999999999999999998753 3566666 5666666665 999999999999999999999861
Q ss_pred HhCCCCCCCCCChhhHH--HhhcCchhhhhhhhccCCCCccCCHHHHHHHHhhchhhHHHHHhh--cCCcccCCCCCccc
Q 000808 238 ESMGFKCPERKGVADFL--QEVTSRKDQQQYWVHKEMPYRFVTAQEFSEAFQSFTVGQKLADEL--RTPFDKCKSHPAAL 313 (1275)
Q Consensus 238 ~~~G~~~p~~~~~ad~l--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 313 (1275)
..-.++.. ++.....+.. +.+.. ...+.....+.+. ......+. .......+.+....
T Consensus 578 ---------~G~Y~~lv~~Q~~~~~~~~~----~~~~~----~~~~~~~s~~~s~-~~~~~~~~~~~~~~~~~~~~~e~~ 639 (1228)
T KOG0055|consen 578 ---------GGIYSSLVRLQELEKAAEDE----EEEES----LKEERSRSLKSSS-SSPSLSRGSNRSNLLSVKPEGEDP 639 (1228)
T ss_pred ---------cchHHHHHHHHhhhhhhhcc----ccccc----hhhhhhhcccccc-ccccccCCcccccccccccccccc
Confidence 11112221 1111111100 00000 0000000000000 00000000 00000000000000
Q ss_pred cccccccCHHHHHHHHHHHHHHHHhcChHHHHHHHH-------HHHHHHHHHHHhh---ccccCCCCCcCCccceehHHH
Q 000808 314 TTKMYGVGKKELLKANISRELLLMKRNSFVYIFKLT-------QLSSMALVSMTLF---FRTKMHKDSVSDGGIYVGATF 383 (1275)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~r~~~~~~r~~~~~~~~~~-------~~~~~~l~~g~l~---~~~~~~~~~~~~~~~~~g~~f 383 (1275)
... . ........+.|-+...++.+....+-.+ ...+++.+++.++ +..+.+ ........+.++|
T Consensus 640 -~~~--~-~~~~~~~s~~~i~k~~~pe~~~l~lG~i~a~i~G~~~P~fa~~~s~~~~~f~~~~~~--~~~~~~~~~al~f 713 (1228)
T KOG0055|consen 640 -EEP--V-SEEDEKVSFWRIFKLNKPEWPYLLLGSLGAAIRGATYPLFAYVFSQVLEAFYPPDDD--ELKREVRAWALIF 713 (1228)
T ss_pred -ccc--c-ccccccccHHHHHHhccchhHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCChH--HHHHHHHHHHHHH
Confidence 000 0 0000111223333333333333322222 2223333333322 211111 0111111122333
Q ss_pred HHHHHHH--HhhhHHHHHHhhcchhHHHhhhcCCcchhHHHHHHHHHHhhHHHHHHHHHHhhhhhcccccCChhHHHHHH
Q 000808 384 FAVMMTM--FNGMSDISMTIAKLPVFYKQRDLRFYAAWAYALPAWILKIPISFLEVAVWVFLTYYVIGFDPNIGRLFKQF 461 (1275)
Q Consensus 384 ~~i~~~~--~~~~~~~~~~~~~~~v~~~~r~~~~y~~~~y~l~~~i~~~p~~~~~~~~~~~i~Y~l~gl~~~~g~~~~~~ 461 (1275)
..+.... ++.+...........+..|-|.. +.+.++..++.+++- ..|.|++..++
T Consensus 714 ~~l~~~~~i~~~~q~~~f~~~ge~Lt~R~R~~---------~F~~ll~qd~~wFD~-------------~~nsg~l~~RL 771 (1228)
T KOG0055|consen 714 LGLGIVSGITNFLQHYFFGIAGEKLTKRLRSM---------MFRALLRQEVGWFDD-------------PENSGALSSRL 771 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------HHHHHHcCCCcccCC-------------CccchHHHHHH
Confidence 2222111 11111111122222222222211 112233333333221 11237666666
Q ss_pred HHH-----HHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccccccCCCccchhhhhHhhCH---HHHHHHHHH
Q 000808 462 LLL-----LLVNQMASALFRFIAAAGRNMIVAMSFGSFVLLVLFAFGGFVLSRDDIKKWWVWGYWCSP---MMYAQNAIV 533 (1275)
Q Consensus 462 l~~-----~l~~~~~~~l~~~i~~~~~~~~ia~~~~~~~~~~~~l~~gf~i~~~~i~~~~~w~~~~sp---~~y~~~al~ 533 (1275)
... .++..-.+.+...++++...+.+|..++|=+.++.+.+..+++-..-+. -+++.-.+. ..|.-.+..
T Consensus 772 a~Da~~vr~~v~~rl~~vv~~~~~~~~~iiiaf~~~W~lalv~la~~Pll~~~~~~~--~~~~~~~~~~~~~~~~ea~~i 849 (1228)
T KOG0055|consen 772 ATDASNVRAAVGDRLSLVVQNIAAVIIGIIIAFIYGWRLALVVLATFPLLILSGYLQ--KKFLKGFSKDDKKAYEEASKI 849 (1228)
T ss_pred hcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHhhhhHHHHHHHHHHHHH
Confidence 321 1222222233333344444455555555544443333221110000000 000000000 000000111
Q ss_pred HhHcCCCccccccCCCcccchHHHhhhcC---cccC----CcchhHHHHHHHHHHHH---HHHHHHHHHhhcccCCC-Cc
Q 000808 534 ANEFFGHSWRKFTSNSNETLGVQVLKSRG---FFPH----AYWYWLGLGATIGFVLL---FNIGFTLSLTFLNQFEK-PR 602 (1275)
Q Consensus 534 ~~ef~~~~~~~~~~~~~~~~g~~~l~~~~---~~~~----~~~~w~~~~~~~~~~~~---~~i~~~~~l~~~~~~~~-~~ 602 (1275)
.+|.... .+.+.. .+....++..+. -.+. ....|.+++..+...+. +.+.+.++......... ..
T Consensus 850 A~eai~N-IrTV~a---l~~e~~~~~~y~~~l~~p~~~~~~~~~i~gl~f~~sqs~~~~~~A~~f~~G~~Li~~g~~~~~ 925 (1228)
T KOG0055|consen 850 AIEAVSN-IRTVAA---LCAEEKFMELYKEELEKPRKSSFKRGLISGLGFGFSQSLLFFVYALSFWYGARLISNGEMTFE 925 (1228)
T ss_pred HHHHHHh-HHHHHH---HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhcCCcCHH
Confidence 1110000 000000 000000000000 0000 01123333322222221 22223333222211100 00
Q ss_pred ceeccCCccccc-CCcCCCCcccccCCCCCCCCCCCCcccccccchhhhhccccc-ccccccCccCCCcccCCCCcEEEE
Q 000808 603 AVISDESESNDL-GNRIGGTAQLSTHGSNSSHKTCSESEDITVKDSFSQLLSQRE-VTVGAIQPKKRGMVLPFEPHSLTF 680 (1275)
Q Consensus 603 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 680 (1275)
.+..... .... ....+..... .|.... .. ......-.+..+.+ .+... +.+...|...+.+++
T Consensus 926 ~~~~vf~-~l~~ta~~~~~~~s~--------~Pd~~k-a~-~Aa~~iF~i~dr~~~i~~~~----~~~~~~~~~~G~I~~ 990 (1228)
T KOG0055|consen 926 DVFRVFM-ALSFTAMALGQASSY--------APDISK-AK-IAAGSIFEILDRKPTIDPDS----TSGGKLPNVKGDIEF 990 (1228)
T ss_pred HHHHHHH-HHHHHHHHHHHHHhh--------CcHHHH-HH-HHHHHHHHHhcCCCCCCCCC----CCCCccccceeEEEE
Confidence 0000000 0000 0000000000 000000 00 00001111111111 11000 112223334568999
Q ss_pred EeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCCc--
Q 000808 681 DEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ-- 758 (1275)
Q Consensus 681 ~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~-- 758 (1275)
+||+|+|+.++ +.+||+|+|++|++|+.+||+|||||||||.+.+|-...+ +..|.|.|||.+++.
T Consensus 991 ~~V~F~YPsRP----------~~~Il~~l~l~i~~GqTvALVG~SGsGKSTvI~LLeRfYd--p~~G~V~IDg~dik~ln 1058 (1228)
T KOG0055|consen 991 RNVSFAYPTRP----------DVPVLNNLSLSIRAGQTVALVGPSGSGKSTVISLLERFYD--PDAGKVKIDGVDIKDLN 1058 (1228)
T ss_pred eeeEeeCCCCC----------CchhhcCCcEEecCCCEEEEECCCCCCHHHHHHHHHHhcC--CCCCeEEECCcccccCC
Confidence 99999997553 4579999999999999999999999999999999987655 458999999998765
Q ss_pred -ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHH-------cCCCccccccccCCCCCCC
Q 000808 759 -ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMEL-------VELNPLRQSLVGLPGESGL 830 (1275)
Q Consensus 759 -~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~-------l~l~~~~~~~~~~~~~~~l 830 (1275)
..+|+++|.|.|+|.+|. -|++||+.|+. . +.+.++ +.++++. .+|.+-.||.+|..+. +|
T Consensus 1059 l~~LR~~i~lVsQEP~LF~-~TIrENI~YG~----~-~vs~~e----Ii~Aak~ANaH~FI~sLP~GyDT~vGerG~-QL 1127 (1228)
T KOG0055|consen 1059 LKWLRKQIGLVSQEPVLFN-GTIRENIAYGS----E-EVSEEE----IIEAAKLANAHNFISSLPQGYDTRVGERGV-QL 1127 (1228)
T ss_pred HHHHHHhcceeccCchhhc-ccHHHHHhccC----C-CCCHHH----HHHHHHHhhhHHHHhcCcCcccCccCcccC-cC
Confidence 356788999999999986 69999999971 1 133333 3333333 3456667899986554 79
Q ss_pred CHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcEEE
Q 000808 831 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQEI 910 (1275)
Q Consensus 831 SgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~ 910 (1275)
|||||||++||||+++||+||+|||+||+||+++.+.+++.|.+.. .|+|.|+++|+++ ..+.+|.|.++++ |+++
T Consensus 1128 SGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a~-~gRT~IvIAHRLS--TIqnaD~I~Vi~~-G~Vv 1203 (1228)
T KOG0055|consen 1128 SGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRAM-EGRTTIVIAHRLS--TIQNADVIAVLKN-GKVV 1203 (1228)
T ss_pred CchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHhh-cCCcEEEEecchh--hhhcCCEEEEEEC-CEEE
Confidence 9999999999999999999999999999999999999999999864 5899999999986 5789999999995 8999
Q ss_pred EECCC
Q 000808 911 YVGPL 915 (1275)
Q Consensus 911 ~~g~~ 915 (1275)
..|.-
T Consensus 1204 E~GtH 1208 (1228)
T KOG0055|consen 1204 EQGTH 1208 (1228)
T ss_pred ecccH
Confidence 99985
No 13
>TIGR00955 3a01204 The Eye Pigment Precursor Transporter (EPP) Family protein.
Probab=100.00 E-value=7.6e-71 Score=686.93 Aligned_cols=551 Identities=24% Similarity=0.386 Sum_probs=453.7
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCccccceEEEeccccccCCCCCHHHHHHHHHhccCCCCc
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFVPQRTAAYISQHDVHIGEMTVRETLAFSARCQGVGSR 80 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~ 80 (1275)
+++|+|||||||||||++|+|+.+++...+|+|.+||.+++....++.++||+|+|.+++++||+|||.|+++++.+...
T Consensus 53 ~~aI~G~sGsGKSTLL~~L~g~~~~~~~~~G~i~~~g~~~~~~~~~~~i~yv~Q~~~~~~~lTV~e~l~f~~~~~~~~~~ 132 (617)
T TIGR00955 53 LLAVMGSSGAGKTTLMNALAFRSPKGVKGSGSVLLNGMPIDAKEMRAISAYVQQDDLFIPTLTVREHLMFQAHLRMPRRV 132 (617)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCHHHHhhhceeeccccccCccCcHHHHHHHHHhcCCCCCC
Confidence 58999999999999999999998875456899999999876555667899999999999999999999999877532110
Q ss_pred chhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCc-cccccccccchhhHHHHH
Q 000808 81 YDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEM-VRGISGGQKKRVTTGEMM 159 (1275)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~-~~~LSGGqrqRvsiA~al 159 (1275)
.+ ++.+..++++++.+||.++.||.||++. .++|||||||||+||++|
T Consensus 133 -------~~------------------------~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~~LSgGqrkRvsia~aL 181 (617)
T TIGR00955 133 -------TK------------------------KEKRERVDEVLQALGLRKCANTRIGVPGRVKGLSGGERKRLAFASEL 181 (617)
T ss_pred -------CH------------------------HHHHHHHHHHHHHcCchhcCcCccCCCCCCCCcCcchhhHHHHHHHH
Confidence 00 1122347889999999999999999863 688999999999999999
Q ss_pred hcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhhHHHHHHh
Q 000808 160 VGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVLDFFES 239 (1275)
Q Consensus 160 ~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~~~~~f~~ 239 (1275)
+++|++++|||||+|||+.++.++++.|+++++ .+.++|+++||++.++.++||++++|++|+++|+|+++++.+||++
T Consensus 182 ~~~p~vlllDEPtsgLD~~~~~~l~~~L~~l~~-~g~tvi~~~hq~~~~i~~~~D~i~ll~~G~~v~~G~~~~~~~~f~~ 260 (617)
T TIGR00955 182 LTDPPLLFCDEPTSGLDSFMAYSVVQVLKGLAQ-KGKTIICTIHQPSSELFELFDKIILMAEGRVAYLGSPDQAVPFFSD 260 (617)
T ss_pred HcCCCEEEeeCCCcchhHHHHHHHHHHHHHHHh-CCCEEEEEeCCCCHHHHHHhceEEEeeCCeEEEECCHHHHHHHHHH
Confidence 999999999999999999999999999999875 4678888888898899999999999999999999999999999999
Q ss_pred CCCCCCCCCChhhHHHhhcCchhhhhhhhccCCCCccCCHHHHHHHHhhchhhHHHHHhhcCCcccCC---CCCcccccc
Q 000808 240 MGFKCPERKGVADFLQEVTSRKDQQQYWVHKEMPYRFVTAQEFSEAFQSFTVGQKLADELRTPFDKCK---SHPAALTTK 316 (1275)
Q Consensus 240 ~G~~~p~~~~~ad~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 316 (1275)
+|++||++.||+||+.++.+....... . .....+++.+.+++++..++..+.......... .........
T Consensus 261 ~g~~~p~~~n~ad~~~~~~~~~~~~~~-----~--~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (617)
T TIGR00955 261 LGHPCPENYNPADFYVQVLAVIPGSEN-----E--SRERIEKICDSFAVSDIGRDMLVNTNLWSGKAGGLVKDSENMEGI 333 (617)
T ss_pred cCCCCCCCCChHHHHHHHhhcCccccc-----c--hHHHHHHHHHHHhcchhhHHHHHHhhhhhcccccccccccccccc
Confidence 999999999999999988754322110 0 001123344445444333332222111000000 000111123
Q ss_pred ccccCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhccccCCCCCcCCccceehHHHHHHHHHHHhhhH-
Q 000808 317 MYGVGKKELLKANISRELLLMKRNSFVYIFKLTQLSSMALVSMTLFFRTKMHKDSVSDGGIYVGATFFAVMMTMFNGMS- 395 (1275)
Q Consensus 317 ~~~~~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~~~~g~~f~~i~~~~~~~~~- 395 (1275)
.+..+.+.|+..+++|.+...+|++..+..++.+.+++++++|++|++.+.+. .+.....|++|+.++...+.++.
T Consensus 334 ~~~~~~~~q~~~l~~R~~~~~~R~~~~~~~~~~~~i~~~li~G~~f~~~~~~~---~~~~~~~g~lf~~~~~~~f~~~~~ 410 (617)
T TIGR00955 334 GYNASWWTQFYALLKRSWLSVLRDPLLLKVRLIQTMMTAILIGLIYLGQGLTQ---KGVQNINGALFLFLTNMTFQNVFP 410 (617)
T ss_pred ccCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCCH---HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45678899999999999999999999999999999999999999999876432 23344578888887777666553
Q ss_pred HHHHHhhcchhHHHhhhcCCcchhHHHHHHHHHHhhHHHHHHHHHHhhhhhcccccCChhHHHHHHHHHHHHHHHHHHHH
Q 000808 396 DISMTIAKLPVFYKQRDLRFYAAWAYALPAWILKIPISFLEVAVWVFLTYYVIGFDPNIGRLFKQFLLLLLVNQMASALF 475 (1275)
Q Consensus 396 ~~~~~~~~~~v~~~~r~~~~y~~~~y~l~~~i~~~p~~~~~~~~~~~i~Y~l~gl~~~~g~~~~~~l~~~l~~~~~~~l~ 475 (1275)
.+.....+++++.||+..++|++.+|++++.+.++|+.++.+++|..++|||+|+++++++|+.++++.++...++.+++
T Consensus 411 ~~~~f~~er~v~~rE~~~~~Y~~~~y~la~~l~~lp~~~~~~~if~~i~Y~~~gl~~~~~~f~~f~l~~~l~~~~~~s~~ 490 (617)
T TIGR00955 411 VINVFTAELPVFLRETRSGLYRVSAYFLAKTIAELPLFIILPALFTSITYWMIGLRSGATHFLTFLFLVTLVANVATSFG 490 (617)
T ss_pred HHHHHHHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHHHHHHHhhhheeccCCccHHHHHHHHHHHHHHHHHHHHHH
Confidence 45556689999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCChHHHHHHHHHHHHHHHHhccccccCCCccchhhhhHhhCHHHHHHHHHHHhHcCCCcc-ccccCCC---cc
Q 000808 476 RFIAAAGRNMIVAMSFGSFVLLVLFAFGGFVLSRDDIKKWWVWGYWCSPMMYAQNAIVANEFFGHSW-RKFTSNS---NE 551 (1275)
Q Consensus 476 ~~i~~~~~~~~ia~~~~~~~~~~~~l~~gf~i~~~~i~~~~~w~~~~sp~~y~~~al~~~ef~~~~~-~~~~~~~---~~ 551 (1275)
.++++++++..+|..+++++++++++|+||+++.++||.||+|++|+||++|++++++.|||.+..+ .|...+. +.
T Consensus 491 ~~i~~~~~~~~~a~~~~~~~~~~~~lf~G~~i~~~~ip~~~~W~~~isp~~ya~~al~~nef~~~~~~~c~~~~~~~~c~ 570 (617)
T TIGR00955 491 YLISCAFSSTSMALTVGPPFVIPFLLFGGFFINSDSIPVYFKWLSYLSWFRYGNEGLLINQWSDVDNIECTSANTTGPCP 570 (617)
T ss_pred HHHHHhcCchHHHHHHHHHHHHHHHHHhhcccChhhccHHHHHHHHcCHHHHHHHHHHHHHhCCCccccccCcCcCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999988765 4432221 23
Q ss_pred cchHHHhhhcCcccCCcchhHHHHHHHHHHHHHHHHHHHHHhhc
Q 000808 552 TLGVQVLKSRGFFPHAYWYWLGLGATIGFVLLFNIGFTLSLTFL 595 (1275)
Q Consensus 552 ~~g~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~i~~~~~l~~~ 595 (1275)
..|.++++.+++... +.|.++++++++.++|.+++++.+++.
T Consensus 571 ~~g~~~l~~~g~~~~--~~~~~~~il~~~~~~~~~l~~~~L~~~ 612 (617)
T TIGR00955 571 SSGEVILETLSFRNA--DLYLDLIGLVILIFFFRLLAYFALRIR 612 (617)
T ss_pred cChHHHHHhcCCCcc--cHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 458889998888654 358899999999999999999988753
No 14
>PLN03211 ABC transporter G-25; Provisional
Probab=100.00 E-value=4.2e-70 Score=677.71 Aligned_cols=548 Identities=21% Similarity=0.346 Sum_probs=428.6
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCccccceEEEeccccccCCCCCHHHHHHHHHhccCCCCc
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFVPQRTAAYISQHDVHIGEMTVRETLAFSARCQGVGSR 80 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~ 80 (1275)
+++|+|||||||||||++|+|+.+|+ ..+|+|.+||+++... .++.++||+|++.+++.+||+||+.|++.++....
T Consensus 96 ~~aI~GpnGaGKSTLL~iLaG~~~~~-~~sG~I~inG~~~~~~-~~~~i~yv~Q~~~l~~~lTV~E~l~~~a~~~~~~~- 172 (659)
T PLN03211 96 ILAVLGPSGSGKSTLLNALAGRIQGN-NFTGTILANNRKPTKQ-ILKRTGFVTQDDILYPHLTVRETLVFCSLLRLPKS- 172 (659)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC-ceeEEEEECCEECchh-hccceEEECcccccCCcCCHHHHHHHHHHhCCCCC-
Confidence 48999999999999999999998874 3589999999887532 34569999999999999999999999876532110
Q ss_pred chhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhhHHHHHh
Q 000808 81 YDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEMMV 160 (1275)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~al~ 160 (1275)
.. .++....++++++.+||+++.||.+|++..++|||||||||+||++|+
T Consensus 173 ------~~------------------------~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSgGerqRv~ia~aL~ 222 (659)
T PLN03211 173 ------LT------------------------KQEKILVAESVISELGLTKCENTIIGNSFIRGISGGERKRVSIAHEML 222 (659)
T ss_pred ------CC------------------------HHHHHHHHHHHHHHcCChhhcCceeCCCCCCCcChhhhhHHHHHHHHH
Confidence 00 011123467889999999999999999999999999999999999999
Q ss_pred cCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhhHHHHHHhC
Q 000808 161 GPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVLDFFESM 240 (1275)
Q Consensus 161 ~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~~~~~f~~~ 240 (1275)
.+|+|++|||||+|||+.++.++++.|+++++ .++|+|+++||+..++.++||++++|++|++++.|+++++.+||+++
T Consensus 223 ~~P~iLlLDEPtsgLD~~~~~~l~~~L~~l~~-~g~TvI~~sH~~~~~i~~~~D~iilL~~G~iv~~G~~~~~~~~f~~~ 301 (659)
T PLN03211 223 INPSLLILDEPTSGLDATAAYRLVLTLGSLAQ-KGKTIVTSMHQPSSRVYQMFDSVLVLSEGRCLFFGKGSDAMAYFESV 301 (659)
T ss_pred hCCCEEEEeCCCCCcCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhhceEEEecCCcEEEECCHHHHHHHHHHC
Confidence 99999999999999999999999999999875 46777887777777899999999999999999999999999999999
Q ss_pred CCCCCCCCChhhHHHhhcCchhhhhhhhccCCCCccCCHHHHHHHHhhchhhHHHHHhhc-----CCcccC----CCCCc
Q 000808 241 GFKCPERKGVADFLQEVTSRKDQQQYWVHKEMPYRFVTAQEFSEAFQSFTVGQKLADELR-----TPFDKC----KSHPA 311 (1275)
Q Consensus 241 G~~~p~~~~~ad~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~----~~~~~ 311 (1275)
||+||++.|||||+.++.+...+.......+.+ ...+.+.+.+++... .+..++.. ...... .....
T Consensus 302 G~~~P~~~NpADf~ldv~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (659)
T PLN03211 302 GFSPSFPMNPADFLLDLANGVCQTDGVSEREKP---NVKQSLVASYNTLLA-PKVKAAIEMSHFPQANARFVGSASTKEH 377 (659)
T ss_pred CCCCCCCCCHHHHHHHHcCccccCCCccccccc---hHHHHHHHHHHhhcc-HHHHHHHhhhhhhcchhhhhhccccccc
Confidence 999999999999999988654221000000000 011222233322110 00000000 000000 00000
Q ss_pred cccccccccCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhccccCCCCCcCCccceehHHHHHHHHHHH
Q 000808 312 ALTTKMYGVGKKELLKANISRELLLMKRNSFVYIFKLTQLSSMALVSMTLFFRTKMHKDSVSDGGIYVGATFFAVMMTMF 391 (1275)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~~~~g~~f~~i~~~~~ 391 (1275)
......+..+++.|+..+++|.+.. +|++.....++++.+++++++|++|++.+ ..+...+.|++||++++..+
T Consensus 378 ~~~~~~~~~s~~~Q~~~L~~R~~~~-~r~~~~~~~r~~~~i~~~ll~G~lf~~~~-----~~~~~~r~g~lff~~~~~~~ 451 (659)
T PLN03211 378 RSSDRISISTWFNQFSILLQRSLKE-RKHESFNTLRVFQVIAAALLAGLMWWHSD-----FRDVQDRLGLLFFISIFWGV 451 (659)
T ss_pred ccCCCccCCCHHHHHHHHHHHHHHH-HhCcHHHHHHHHHHHHHHHHHHHHHhcCC-----HHHHHHHHHHHHHHHHHHHH
Confidence 0011224467889999999999887 78777778999999999999999999864 12345567889888776554
Q ss_pred -hhhHHHHHHhhcchhHHHhhhcCCcchhHHHHHHHHHHhhHHHHHHHHHHhhhhhcccccCChhHHHHHHHHHHHHHHH
Q 000808 392 -NGMSDISMTIAKLPVFYKQRDLRFYAAWAYALPAWILKIPISFLEVAVWVFLTYYVIGFDPNIGRLFKQFLLLLLVNQM 470 (1275)
Q Consensus 392 -~~~~~~~~~~~~~~v~~~~r~~~~y~~~~y~l~~~i~~~p~~~~~~~~~~~i~Y~l~gl~~~~g~~~~~~l~~~l~~~~ 470 (1275)
..+..+..+..++++++|||..++|++.+|++++.+.++|+.++.+++|+.|+|||+|+++++++|+.++++.++...+
T Consensus 452 ~~~~~~~~~f~~er~v~~rE~~~~~Y~~~~Y~la~~l~elP~~~~~~~if~~i~Y~m~Gl~~~~~~F~~f~li~~l~~~~ 531 (659)
T PLN03211 452 FPSFNSVFVFPQERAIFVKERASGMYTLSSYFMARIVGDLPMELILPTIFLTVTYWMAGLKPELGAFLLTLLVLLGYVLV 531 (659)
T ss_pred HHHHHHHHHHHHhhHHHHHhhhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhheeEcCCCcCCHHHHHHHHHHHHHHHHH
Confidence 4456677777899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccccccCCCccchhhhhHhhCHHHHHHHHHHHhHcCCCc-----cccc
Q 000808 471 ASALFRFIAAAGRNMIVAMSFGSFVLLVLFAFGGFVLSRDDIKKWWVWGYWCSPMMYAQNAIVANEFFGHS-----WRKF 545 (1275)
Q Consensus 471 ~~~l~~~i~~~~~~~~ia~~~~~~~~~~~~l~~gf~i~~~~i~~~~~w~~~~sp~~y~~~al~~~ef~~~~-----~~~~ 545 (1275)
+++++.+++++++++.+|+.+++++++++++|+||+++ +||.||+|++|+||++|++++++.|||.+.. +.|.
T Consensus 532 ~~s~g~~i~a~~~~~~~a~~~~~~~~~~~~lfsGf~i~--~ip~~~~W~~ylS~~~y~~eal~~nef~~~~~~~~~~~C~ 609 (659)
T PLN03211 532 SQGLGLALGAAIMDAKKASTIVTVTMLAFVLTGGFYVH--KLPSCMAWIKYISTTFYSYRLLINVQYGEGKRISSLLGCS 609 (659)
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhhhHh--hchHHHHHHHHhCHHHHHHHHHHHHhcCCccccccccCCC
Confidence 99999999999999999999999999999999999996 7999999999999999999999999997643 2332
Q ss_pred cCCCcccchHHHhhhcCcccCCcchhHHHHHHHHHHHHHHHHHHHHHhhcc
Q 000808 546 TSNSNETLGVQVLKSRGFFPHAYWYWLGLGATIGFVLLFNIGFTLSLTFLN 596 (1275)
Q Consensus 546 ~~~~~~~~g~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~i~~~~~l~~~~ 596 (1275)
........++.++....+. ....|.++++++++++++.++++++++..+
T Consensus 610 ~~~~~~~~~c~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~l~~~~L~~~~ 658 (659)
T PLN03211 610 LPHGSDRASCKFVEEDVAG--QISPATSVSVLIFMFVGYRLLAYLALRRIK 658 (659)
T ss_pred CcccCCCCCCccchhhhhc--ccchHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 2111111111222222222 234688999999999999999998887543
No 15
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=3.9e-67 Score=691.89 Aligned_cols=223 Identities=28% Similarity=0.416 Sum_probs=192.2
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 756 (1275)
.++++|+++.++. +++.+|+|||+.|++||++||+||||||||||+|+|+|..++ .+|+|.++|.+.
T Consensus 1937 ~L~v~nLsK~Y~~-----------~~~~aL~~ISf~I~~GEi~gLLG~NGAGKTTLlkmL~Gll~p--tsG~I~i~G~~i 2003 (2272)
T TIGR01257 1937 ILRLNELTKVYSG-----------TSSPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTTV--TSGDATVAGKSI 2003 (2272)
T ss_pred eEEEEEEEEEECC-----------CCceEEEeeEEEEcCCcEEEEECCCCCcHHHHHHHHhCCCCC--CccEEEECCEEC
Confidence 5899999988741 124699999999999999999999999999999999998763 489999999886
Q ss_pred Cc--ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHH
Q 000808 757 KQ--ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQ 834 (1275)
Q Consensus 757 ~~--~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGe 834 (1275)
.. ...++.+|||+|++.+++.+||+|++.+.+.++. .+.++.++.++++++.+||.+.+|+.++ .|||||
T Consensus 2004 ~~~~~~~r~~IGy~pQ~~~L~~~LTv~E~L~l~a~l~g---~~~~~~~~~v~~lLe~lgL~~~~dk~~~-----~LSGGq 2075 (2272)
T TIGR01257 2004 LTNISDVHQNMGYCPQFDAIDDLLTGREHLYLYARLRG---VPAEEIEKVANWSIQSLGLSLYADRLAG-----TYSGGN 2075 (2272)
T ss_pred cchHHHHhhhEEEEeccccCCCCCCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCHHHhcCChh-----hCCHHH
Confidence 42 2245679999999999999999999998776652 2334445678899999999998888874 699999
Q ss_pred HHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcEEEEECC
Q 000808 835 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVGP 914 (1275)
Q Consensus 835 rqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~ 914 (1275)
|||++||+||+.+|+|+||||||+|||+.+++.+++.|++++++|+|||+|||+++ ++..++||+++|.+ |++++.|+
T Consensus 2076 KqRLslA~ALi~~P~VLLLDEPTsGLDp~sr~~l~~lL~~l~~~g~TIILtTH~me-e~e~lcDrV~IL~~-G~i~~~Gs 2153 (2272)
T TIGR01257 2076 KRKLSTAIALIGCPPLVLLDEPTTGMDPQARRMLWNTIVSIIREGRAVVLTSHSME-ECEALCTRLAIMVK-GAFQCLGT 2153 (2272)
T ss_pred HHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEECC
Confidence 99999999999999999999999999999999999999998877999999999986 67789999999996 79999998
Q ss_pred CCccchHHHHHH
Q 000808 915 LGRHSCHLIRYF 926 (1275)
Q Consensus 915 ~~~~~~~~~~~f 926 (1275)
+ +++...|
T Consensus 2154 ~----q~Lk~~~ 2161 (2272)
T TIGR01257 2154 I----QHLKSKF 2161 (2272)
T ss_pred H----HHHHHHh
Confidence 7 4455444
No 16
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=1.6e-67 Score=709.10 Aligned_cols=213 Identities=22% Similarity=0.302 Sum_probs=178.8
Q ss_pred cEEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCcc
Q 000808 676 HSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 755 (1275)
Q Consensus 676 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~ 755 (1275)
+.++|+|++++|+. +.+++|+|+|++|+|||++||+||||||||||+++|.|..+ +.+|+|.+||.+
T Consensus 1236 g~I~f~nVsf~Y~~-----------~~~~VL~~is~~I~~GekVaIVGrSGSGKSTLl~lL~rl~~--p~~G~I~IDG~d 1302 (1622)
T PLN03130 1236 GSIKFEDVVLRYRP-----------ELPPVLHGLSFEISPSEKVGIVGRTGAGKSSMLNALFRIVE--LERGRILIDGCD 1302 (1622)
T ss_pred CcEEEEEEEEEeCC-----------CCCceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCcCC--CCCceEEECCEe
Confidence 57999999999841 22469999999999999999999999999999999999876 348999999998
Q ss_pred CCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCcc-------ccccccCC
Q 000808 756 KKQ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPL-------RQSLVGLP 825 (1275)
Q Consensus 756 ~~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~-------~~~~~~~~ 825 (1275)
+.. ..+|+.+++|||++.+|.. |++|||.+.. ..+ ++.+.++++..++.+. .|+.+|..
T Consensus 1303 I~~i~l~~LR~~IsiVpQdp~LF~G-TIreNLd~~~------~~t----deei~~Al~~a~l~~~I~~lp~GLdt~Vge~ 1371 (1622)
T PLN03130 1303 ISKFGLMDLRKVLGIIPQAPVLFSG-TVRFNLDPFN------EHN----DADLWESLERAHLKDVIRRNSLGLDAEVSEA 1371 (1622)
T ss_pred cccCCHHHHHhccEEECCCCccccc-cHHHHhCcCC------CCC----HHHHHHHHHHcCcHHHHHhCccccCccccCC
Confidence 754 4567889999999999875 9999996431 122 3346777777776533 35556543
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeec
Q 000808 826 GESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKR 905 (1275)
Q Consensus 826 ~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~ 905 (1275)
+.+||||||||+||||||+++|+||+||||||+||+++...|++.|++..+ ++|||+++|+++ ....+|+|++|++
T Consensus 1372 -G~nLSgGQrQrlaLARALLr~p~ILILDEATSaLD~~Te~~Iq~~I~~~~~-~~TvI~IAHRL~--tI~~~DrIlVLd~ 1447 (1622)
T PLN03130 1372 -GENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK-SCTMLIIAHRLN--TIIDCDRILVLDA 1447 (1622)
T ss_pred -CCCCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHCC-CCEEEEEeCChH--HHHhCCEEEEEEC
Confidence 357999999999999999999999999999999999999999999998754 899999999975 4567999999996
Q ss_pred CcEEEEECCCCc
Q 000808 906 GGQEIYVGPLGR 917 (1275)
Q Consensus 906 gg~~~~~g~~~~ 917 (1275)
|+++.+|++++
T Consensus 1448 -G~IvE~Gt~~e 1458 (1622)
T PLN03130 1448 -GRVVEFDTPEN 1458 (1622)
T ss_pred -CEEEEeCCHHH
Confidence 79999999854
No 17
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=1.3e-66 Score=701.64 Aligned_cols=212 Identities=21% Similarity=0.281 Sum_probs=178.0
Q ss_pred cEEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCcc
Q 000808 676 HSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 755 (1275)
Q Consensus 676 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~ 755 (1275)
..++|+|++++|+. +.+++|+|+|++|+|||++||+||||||||||+++|.|..+ +.+|+|.+||.+
T Consensus 1233 g~I~f~nVsf~Y~~-----------~~~~vL~~isl~I~~GekvaIVG~SGSGKSTL~~lL~rl~~--p~~G~I~IdG~d 1299 (1495)
T PLN03232 1233 GSIKFEDVHLRYRP-----------GLPPVLHGLSFFVSPSEKVGVVGRTGAGKSSMLNALFRIVE--LEKGRIMIDDCD 1299 (1495)
T ss_pred CcEEEEEEEEEECC-----------CCCcccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCc--CCCceEEECCEE
Confidence 46999999999841 22469999999999999999999999999999999999876 348999999998
Q ss_pred CCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCcc-------ccccccCC
Q 000808 756 KKQ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPL-------RQSLVGLP 825 (1275)
Q Consensus 756 ~~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~-------~~~~~~~~ 825 (1275)
+.+ ..+|+.++||||++.+|+. |++|||.+.. +.+ ++.+.++++..++.+. .|+.+|..
T Consensus 1300 i~~i~~~~lR~~i~iVpQdp~LF~g-TIr~NL~~~~------~~s----deei~~al~~a~l~~~I~~lp~GLdt~v~e~ 1368 (1495)
T PLN03232 1300 VAKFGLTDLRRVLSIIPQSPVLFSG-TVRFNIDPFS------EHN----DADLWEALERAHIKDVIDRNPFGLDAEVSEG 1368 (1495)
T ss_pred hhhCCHHHHHhhcEEECCCCeeeCc-cHHHHcCCCC------CCC----HHHHHHHHHHcCCHHHHHhCcCCCCceecCC
Confidence 754 4567889999999999875 9999996421 122 3346777887777543 35556543
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeec
Q 000808 826 GESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKR 905 (1275)
Q Consensus 826 ~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~ 905 (1275)
+.+||||||||++|||||+++|+||+||||||+||++++..|++.|++.. +++|+|+++|+++ ....+|+|++|++
T Consensus 1369 -G~~LSgGQrQrlaLARALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~-~~~TvI~IAHRl~--ti~~~DrIlVL~~ 1444 (1495)
T PLN03232 1369 -GENFSVGQRQLLSLARALLRRSKILVLDEATASVDVRTDSLIQRTIREEF-KSCTMLVIAHRLN--TIIDCDKILVLSS 1444 (1495)
T ss_pred -CCCCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHc-CCCEEEEEeCCHH--HHHhCCEEEEEEC
Confidence 35799999999999999999999999999999999999999999999875 4799999999975 5667999999996
Q ss_pred CcEEEEECCCC
Q 000808 906 GGQEIYVGPLG 916 (1275)
Q Consensus 906 gg~~~~~g~~~ 916 (1275)
|+++..|+++
T Consensus 1445 -G~ivE~Gt~~ 1454 (1495)
T PLN03232 1445 -GQVLEYDSPQ 1454 (1495)
T ss_pred -CEEEEECCHH
Confidence 7999999874
No 18
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=4.8e-65 Score=687.39 Aligned_cols=213 Identities=18% Similarity=0.223 Sum_probs=178.6
Q ss_pred cEEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCcc
Q 000808 676 HSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 755 (1275)
Q Consensus 676 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~ 755 (1275)
..++|+|++++|+. +..++|+|||++|+|||++||+||||||||||+++|.|..+ +.+|+|.+||.+
T Consensus 1283 g~I~f~nVsf~Y~~-----------~~~~vL~~is~~I~~GekiaIVGrTGsGKSTL~~lL~rl~~--~~~G~I~IdG~d 1349 (1522)
T TIGR00957 1283 GRVEFRNYCLRYRE-----------DLDLVLRHINVTIHGGEKVGIVGRTGAGKSSLTLGLFRINE--SAEGEIIIDGLN 1349 (1522)
T ss_pred CcEEEEEEEEEeCC-----------CCcccccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCcc--CCCCeEEECCEE
Confidence 57999999999852 12369999999999999999999999999999999999766 347999999998
Q ss_pred CCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCcc-------ccccccCC
Q 000808 756 KKQ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPL-------RQSLVGLP 825 (1275)
Q Consensus 756 ~~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~-------~~~~~~~~ 825 (1275)
+.. ..+|+.+++|||++.+|+. |+||||.... +.+ ++.+.++++..++.+. .|+.+|..
T Consensus 1350 I~~i~~~~LR~~i~iVpQdp~LF~g-TIr~NLdp~~------~~s----deei~~al~~a~l~~~I~~lp~GLdt~v~e~ 1418 (1522)
T TIGR00957 1350 IAKIGLHDLRFKITIIPQDPVLFSG-SLRMNLDPFS------QYS----DEEVWWALELAHLKTFVSALPDKLDHECAEG 1418 (1522)
T ss_pred ccccCHHHHHhcCeEECCCCcccCc-cHHHHcCccc------CCC----HHHHHHHHHHcCcHHHHhhCccCCCceecCC
Confidence 764 4567889999999999975 9999995211 122 2346778888777543 35556543
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeec
Q 000808 826 GESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKR 905 (1275)
Q Consensus 826 ~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~ 905 (1275)
+.+||||||||+||||||+++|+||+||||||+||+++...|++.|++.. +++|||+++|+++ ....+|+|++|++
T Consensus 1419 -G~~LSgGQrQrl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~l~~~~-~~~TvI~IAHRl~--ti~~~DrIlVld~ 1494 (1522)
T TIGR00957 1419 -GENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQSTIRTQF-EDCTVLTIAHRLN--TIMDYTRVIVLDK 1494 (1522)
T ss_pred -CCcCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecCHH--HHHhCCEEEEEEC
Confidence 35799999999999999999999999999999999999999999999875 4799999999975 5677999999996
Q ss_pred CcEEEEECCCCc
Q 000808 906 GGQEIYVGPLGR 917 (1275)
Q Consensus 906 gg~~~~~g~~~~ 917 (1275)
|+++.+|++.+
T Consensus 1495 -G~IvE~G~~~e 1505 (1522)
T TIGR00957 1495 -GEVAEFGAPSN 1505 (1522)
T ss_pred -CEEEEECCHHH
Confidence 89999999843
No 19
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=1.1e-62 Score=570.60 Aligned_cols=459 Identities=26% Similarity=0.322 Sum_probs=350.0
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCC-CceeEEEEECCccCCCccc-------cceEEEeccccc--cCCCCCHHHHHHH
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSK-LKFSGRVTYNGHGMDEFVP-------QRTAAYISQHDV--HIGEMTVRETLAF 70 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~-~~~~G~v~~~g~~~~~~~~-------~~~~~yv~Q~~~--~~~~lTv~e~l~f 70 (1275)
+++|+|.|||||||+.++|.|.+++. ...+|+|.++|.++..... .+.++|++|++. +-|..||.+.|.-
T Consensus 37 ~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~dl~~l~~~~~r~~rg~~Ia~i~Q~p~~slnP~~tIg~Qi~E 116 (539)
T COG1123 37 ILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGRDLLGLSEREMRKLRGKRIAMIFQDPMTSLNPVMTIGDQIRE 116 (539)
T ss_pred EEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCcchhcCCHHHHHHhccccEEEEecCchhhcCchhhHHHHHHH
Confidence 47999999999999999999999876 4468999999987644322 267999999843 5566899999987
Q ss_pred HHhccCCCCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCcccccccccc
Q 000808 71 SARCQGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQK 150 (1275)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqr 150 (1275)
....++... .+++...+.++|+..||++.... +++++.||||||
T Consensus 117 ~~~~h~~~~---------------------------------~~ea~~~a~elL~~Vgl~~~~~~---~~yPheLSGG~r 160 (539)
T COG1123 117 ALRLHGKGS---------------------------------RAEARKRAVELLEQVGLPDPERR---DRYPHQLSGGMR 160 (539)
T ss_pred HHHHhcccc---------------------------------HHHHHHHHHHHHHHcCCCChhhh---ccCCcccCchHH
Confidence 666543111 12233456778999999987654 678999999999
Q ss_pred chhhHHHHHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecCh
Q 000808 151 KRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPR 230 (1275)
Q Consensus 151 qRvsiA~al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~ 230 (1275)
|||.||+||+.+|++|++||||++||+.++.+|++.|+++.++ .++.++.++|+..-+.++||||+||.+|++++.|++
T Consensus 161 QRv~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~llk~l~~e-~g~a~l~ITHDl~Vva~~aDrv~Vm~~G~iVE~G~~ 239 (539)
T COG1123 161 QRVMIAMALALKPKLLIADEPTTALDVTTQAQILDLLKDLQRE-LGMAVLFITHDLGVVAELADRVVVMYKGEIVETGPT 239 (539)
T ss_pred HHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHHHHHHH-cCcEEEEEcCCHHHHHHhcCeEEEEECCEEEEecCH
Confidence 9999999999999999999999999999999999999998765 467777899999999999999999999999999999
Q ss_pred hhHHHHHHhCCCCCCCCCChhhHHHhhcCchhhhhhhhccCCCCccCCHHHHHHHHhhchhhHHHHHhhcCCcccCCCCC
Q 000808 231 ELVLDFFESMGFKCPERKGVADFLQEVTSRKDQQQYWVHKEMPYRFVTAQEFSEAFQSFTVGQKLADELRTPFDKCKSHP 310 (1275)
Q Consensus 231 ~~~~~~f~~~G~~~p~~~~~ad~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (1275)
+++.+.+ .| |++
T Consensus 240 ~~i~~~p--------~h-------------------------pYT----------------------------------- 251 (539)
T COG1123 240 EEILSNP--------QH-------------------------PYT----------------------------------- 251 (539)
T ss_pred HHHHhcc--------CC-------------------------ccc-----------------------------------
Confidence 8875410 00 000
Q ss_pred ccccccccccCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhccccCCCCCcCCccceehHHHHHHHHHH
Q 000808 311 AALTTKMYGVGKKELLKANISRELLLMKRNSFVYIFKLTQLSSMALVSMTLFFRTKMHKDSVSDGGIYVGATFFAVMMTM 390 (1275)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~~~~g~~f~~i~~~~ 390 (1275)
+.+
T Consensus 252 ---------------------~~L-------------------------------------------------------- 254 (539)
T COG1123 252 ---------------------RGL-------------------------------------------------------- 254 (539)
T ss_pred ---------------------HHH--------------------------------------------------------
Confidence 000
Q ss_pred HhhhHHHHHHhhcchhHHHhhhcCCcchhHHHHHHHHHHhhHHHHHHHHHHhhhhhcccccCChhHHHHHHHHHHHHHHH
Q 000808 391 FNGMSDISMTIAKLPVFYKQRDLRFYAAWAYALPAWILKIPISFLEVAVWVFLTYYVIGFDPNIGRLFKQFLLLLLVNQM 470 (1275)
Q Consensus 391 ~~~~~~~~~~~~~~~v~~~~r~~~~y~~~~y~l~~~i~~~p~~~~~~~~~~~i~Y~l~gl~~~~g~~~~~~l~~~l~~~~ 470 (1275)
+...|
T Consensus 255 ------------------------------------l~a~p--------------------------------------- 259 (539)
T COG1123 255 ------------------------------------LAAVP--------------------------------------- 259 (539)
T ss_pred ------------------------------------HhhCC---------------------------------------
Confidence 00000
Q ss_pred HHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccccccCCCccchhhhhHhhCHHHHHHHHHHHhHcCCCccccccCCCc
Q 000808 471 ASALFRFIAAAGRNMIVAMSFGSFVLLVLFAFGGFVLSRDDIKKWWVWGYWCSPMMYAQNAIVANEFFGHSWRKFTSNSN 550 (1275)
Q Consensus 471 ~~~l~~~i~~~~~~~~ia~~~~~~~~~~~~l~~gf~i~~~~i~~~~~w~~~~sp~~y~~~al~~~ef~~~~~~~~~~~~~ 550 (1275)
. ...
T Consensus 260 -------------------------------------------~---------------------------------~~~ 263 (539)
T COG1123 260 -------------------------------------------R---------------------------------LGD 263 (539)
T ss_pred -------------------------------------------C---------------------------------ccc
Confidence 0 000
Q ss_pred ccchHHHhhhcCcccCCcchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCCcceeccCCcccccCCcCCCCcccccCCCC
Q 000808 551 ETLGVQVLKSRGFFPHAYWYWLGLGATIGFVLLFNIGFTLSLTFLNQFEKPRAVISDESESNDLGNRIGGTAQLSTHGSN 630 (1275)
Q Consensus 551 ~~~g~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~i~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 630 (1275)
. ....
T Consensus 264 -----------------------------------------------~----------------------------~~~~ 268 (539)
T COG1123 264 -----------------------------------------------E----------------------------KIIR 268 (539)
T ss_pred -----------------------------------------------c----------------------------cccc
Confidence 0 0000
Q ss_pred CCCCCCCCcccccccchhhhhcccccccccccCccCCCcccCCCCcEEEEEeEEEEEeccchhhhccccccccceeeceE
Q 000808 631 SSHKTCSESEDITVKDSFSQLLSQREVTVGAIQPKKRGMVLPFEPHSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVS 710 (1275)
Q Consensus 631 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs 710 (1275)
... . .. .+ ...-++++|++..+..+..+. ....+...+++|||
T Consensus 269 ~~~------~-------------------~~---------~~-~~~ll~V~~l~k~y~~~~~~~--~~~~~~~~Av~~VS 311 (539)
T COG1123 269 LPR------R-------------------GP---------LR-AEPLLSVRNLSKRYGSRKGLF--VRERGEVKAVDDVS 311 (539)
T ss_pred ccc------c-------------------cc---------cc-cCceeEeeeeeeeeccccccc--cccccceeeeeeee
Confidence 000 0 00 00 112477888887776433111 01123457999999
Q ss_pred EEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccC--Cc---ccccceEEEeccCC--CCCCCCCHHHH
Q 000808 711 GAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK--KQ---ETFTRISGYCEQND--IHSPFVTVYES 783 (1275)
Q Consensus 711 ~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~--~~---~~~~~~~~~v~q~~--~~~~~ltv~e~ 783 (1275)
|++++||++||+|+||||||||.++|+|..++ ..|.|.++|.+. .. ...++.+-+++|++ .+.|.+||++.
T Consensus 312 f~l~~GE~lglVGeSGsGKSTlar~i~gL~~P--~~G~i~~~g~~~~~~~~~~~~~r~~~QmvFQdp~~SLnPr~tV~~~ 389 (539)
T COG1123 312 FDLREGETLGLVGESGSGKSTLARILAGLLPP--SSGSIIFDGQDLDLTGGELRRLRRRIQMVFQDPYSSLNPRMTVGDI 389 (539)
T ss_pred eEecCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEEeCcccccccchhhhhhhheEEEEeCcccccCccccHHHH
Confidence 99999999999999999999999999998764 479999999762 11 12344566677765 57799999999
Q ss_pred HHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCc-cccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCH
Q 000808 784 LLYSAWLRLPPEVDSETQKMFIEEIMELVELNP-LRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA 862 (1275)
Q Consensus 784 l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~-~~~~~~~~~~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~ 862 (1275)
+.-....... ....++++++.++++.+||.. ..+++ +.+||||||||++|||||+.+|++|++|||||.||+
T Consensus 390 i~epL~~~~~--~~~~~~~~rv~~ll~~VgL~~~~l~ry-----P~elSGGQrQRvaIARALa~~P~lli~DEp~SaLDv 462 (539)
T COG1123 390 LAEPLRIHGG--GSGAERRARVAELLELVGLPPEFLDRY-----PHELSGGQRQRVAIARALALEPKLLILDEPVSALDV 462 (539)
T ss_pred HHhHHhhhcc--cchHHHHHHHHHHHHHcCCCHHHHhcC-----chhcCcchhHHHHHHHHHhcCCCEEEecCCccccCH
Confidence 9776544322 224566778999999999985 34444 357999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhhhhheeecCcEEEEECCC
Q 000808 863 RAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVGPL 915 (1275)
Q Consensus 863 ~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 915 (1275)
..+..+.++|+++.++ |.|.|++|||.+ -+...|||+++|.+ |+++..||.
T Consensus 463 svqa~VlnLl~~lq~e~g~t~lfISHDl~-vV~~i~drv~vm~~-G~iVE~G~~ 514 (539)
T COG1123 463 SVQAQVLNLLKDLQEELGLTYLFISHDLA-VVRYIADRVAVMYD-GRIVEEGPT 514 (539)
T ss_pred HHHHHHHHHHHHHHHHhCCEEEEEeCCHH-HHHhhCceEEEEEC-CeEEEeCCH
Confidence 9999999999999866 999999999986 46789999999996 899999975
No 20
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=5.6e-63 Score=664.62 Aligned_cols=212 Identities=24% Similarity=0.277 Sum_probs=178.7
Q ss_pred cEEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCcc
Q 000808 676 HSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 755 (1275)
Q Consensus 676 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~ 755 (1275)
..++|+||+++|+. +.+.+|+||||+|+|||++||+|+||||||||+++|.|..+ +.+|+|.+||.+
T Consensus 1307 G~I~f~nVsf~Y~~-----------~~~~vL~~vsf~I~~GekVaIVGrTGSGKSTLl~lLlrl~~--p~~G~I~IDG~d 1373 (1560)
T PTZ00243 1307 GSLVFEGVQMRYRE-----------GLPLVLRGVSFRIAPREKVGIVGRTGSGKSTLLLTFMRMVE--VCGGEIRVNGRE 1373 (1560)
T ss_pred CeEEEEEEEEEeCC-----------CCCceeecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEE
Confidence 57999999999852 22459999999999999999999999999999999999876 357999999998
Q ss_pred CCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCcc-------ccccccCC
Q 000808 756 KKQ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPL-------RQSLVGLP 825 (1275)
Q Consensus 756 ~~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~-------~~~~~~~~ 825 (1275)
+.. ..+|+.++||||++.+|.. |++|||... ...+ ++.+.++++..++.+. .|+.+|.
T Consensus 1374 i~~i~l~~LR~~I~iVpQdp~LF~g-TIreNIdp~------~~~s----deeI~~Al~~a~l~~~I~~lp~Gldt~vge- 1441 (1560)
T PTZ00243 1374 IGAYGLRELRRQFSMIPQDPVLFDG-TVRQNVDPF------LEAS----SAEVWAALELVGLRERVASESEGIDSRVLE- 1441 (1560)
T ss_pred cccCCHHHHHhcceEECCCCccccc-cHHHHhCcc------cCCC----HHHHHHHHHHCCChHHHhhCcccccccccC-
Confidence 754 4567889999999999874 999999521 1222 3457788888888654 3556664
Q ss_pred CCCCCCHHHHHHHHHHHHHhhC-CcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheee
Q 000808 826 GESGLSTEQRKRLTIAVELVAN-PSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMK 904 (1275)
Q Consensus 826 ~~~~lSgGerqrv~ia~~l~~~-p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~ 904 (1275)
++.+||||||||++|||||+++ |+||+||||||+||+++...|++.|++..+ ++|||+++|+++ ....+|+|++|+
T Consensus 1442 ~G~nLSgGQrQrLaLARALL~~~~~ILlLDEATSaLD~~te~~Iq~~L~~~~~-~~TvI~IAHRl~--ti~~~DrIlVLd 1518 (1560)
T PTZ00243 1442 GGSNYSVGQRQLMCMARALLKKGSGFILMDEATANIDPALDRQIQATVMSAFS-AYTVITIAHRLH--TVAQYDKIIVMD 1518 (1560)
T ss_pred CcCcCCHHHHHHHHHHHHHhcCCCCEEEEeCCCccCCHHHHHHHHHHHHHHCC-CCEEEEEeccHH--HHHhCCEEEEEE
Confidence 3357999999999999999996 899999999999999999999999998654 799999999974 678899999998
Q ss_pred cCcEEEEECCCC
Q 000808 905 RGGQEIYVGPLG 916 (1275)
Q Consensus 905 ~gg~~~~~g~~~ 916 (1275)
+ |+++..|+++
T Consensus 1519 ~-G~VvE~Gt~~ 1529 (1560)
T PTZ00243 1519 H-GAVAEMGSPR 1529 (1560)
T ss_pred C-CEEEEECCHH
Confidence 6 7999999874
No 21
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=2e-62 Score=659.57 Aligned_cols=211 Identities=19% Similarity=0.247 Sum_probs=178.5
Q ss_pred cEEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCcc
Q 000808 676 HSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 755 (1275)
Q Consensus 676 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~ 755 (1275)
..++|+||+++|+. +.+++|+|||++|+|||++||+|+||||||||+++|+|..+ .+|+|.+||.+
T Consensus 1216 g~I~f~nVs~~Y~~-----------~~~~vL~~is~~I~~GekvaIvGrSGsGKSTLl~lL~rl~~---~~G~I~IdG~d 1281 (1490)
T TIGR01271 1216 GQMDVQGLTAKYTE-----------AGRAVLQDLSFSVEGGQRVGLLGRTGSGKSTLLSALLRLLS---TEGEIQIDGVS 1281 (1490)
T ss_pred CeEEEEEEEEEeCC-----------CCcceeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC---CCcEEEECCEE
Confidence 57999999999852 23469999999999999999999999999999999999864 37999999998
Q ss_pred CCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCcc-------ccccccCC
Q 000808 756 KKQ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPL-------RQSLVGLP 825 (1275)
Q Consensus 756 ~~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~-------~~~~~~~~ 825 (1275)
+.. ..+|+.++|+||++.+|+. |+||||.... .. .++.+.++++.++|.+. .|+.+|.
T Consensus 1282 i~~i~~~~lR~~is~IpQdp~LF~G-TIR~NLdp~~------~~----tdeei~~aL~~~~L~~~i~~lp~GLdt~v~e- 1349 (1490)
T TIGR01271 1282 WNSVTLQTWRKAFGVIPQKVFIFSG-TFRKNLDPYE------QW----SDEEIWKVAEEVGLKSVIEQFPDKLDFVLVD- 1349 (1490)
T ss_pred cccCCHHHHHhceEEEeCCCccCcc-CHHHHhCccc------CC----CHHHHHHHHHHCCCHHHHHhCcccccccccc-
Confidence 764 3467889999999999974 9999994311 11 23457888888888543 3556654
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeec
Q 000808 826 GESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKR 905 (1275)
Q Consensus 826 ~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~ 905 (1275)
+..+||||||||+||||||+++|+||+||||||+||+++...|++.|++..+ ++|||+++|+++ ....+|+|++|++
T Consensus 1350 ~G~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~~~~~-~~TvI~IaHRl~--ti~~~DrIlvL~~ 1426 (1490)
T TIGR01271 1350 GGYVLSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRKTLKQSFS-NCTVILSEHRVE--ALLECQQFLVIEG 1426 (1490)
T ss_pred CCCcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHcC-CCEEEEEecCHH--HHHhCCEEEEEEC
Confidence 3457999999999999999999999999999999999999999999998754 799999999974 5677999999986
Q ss_pred CcEEEEECCCC
Q 000808 906 GGQEIYVGPLG 916 (1275)
Q Consensus 906 gg~~~~~g~~~ 916 (1275)
|+++.+|++.
T Consensus 1427 -G~ivE~g~p~ 1436 (1490)
T TIGR01271 1427 -SSVKQYDSIQ 1436 (1490)
T ss_pred -CEEEEeCCHH
Confidence 7999999874
No 22
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=8.4e-62 Score=647.63 Aligned_cols=218 Identities=18% Similarity=0.299 Sum_probs=178.7
Q ss_pred cEEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCc------------
Q 000808 676 HSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG------------ 743 (1275)
Q Consensus 676 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~------------ 743 (1275)
..++|+||+|+|+.. +++++|+|+|++|+||+++||+||||||||||+++|.|..++.
T Consensus 1164 g~I~f~nVsF~Y~~~----------~~~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp~~~~~~~~~~~~~ 1233 (1466)
T PTZ00265 1164 GKIEIMDVNFRYISR----------PNVPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDLKNDHHIVFKNEHT 1233 (1466)
T ss_pred ceEEEEEEEEECCCC----------CCCccccCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCCccccccccccccc
Confidence 469999999998521 1246999999999999999999999999999999999965531
Q ss_pred ----------------------------------------eEEEEEEEcCccCCc---ccccceEEEeccCCCCCCCCCH
Q 000808 744 ----------------------------------------YITGNITISGYPKKQ---ETFTRISGYCEQNDIHSPFVTV 780 (1275)
Q Consensus 744 ----------------------------------------~~~G~i~~~g~~~~~---~~~~~~~~~v~q~~~~~~~ltv 780 (1275)
+.+|+|.+||.++.. ..+|+.+|||+|++.+|+ .|+
T Consensus 1234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qep~LF~-gTI 1312 (1466)
T PTZ00265 1234 NDMTNEQDYQGDEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVSQEPMLFN-MSI 1312 (1466)
T ss_pred cccccccccccccccccccccccccccccccccccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeCCCCcccc-ccH
Confidence 147999999998753 456788999999999885 799
Q ss_pred HHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCc-------cccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEE
Q 000808 781 YESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNP-------LRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFM 853 (1275)
Q Consensus 781 ~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~-------~~~~~~~~~~~~~lSgGerqrv~ia~~l~~~p~illl 853 (1275)
+||+.++. + +.+. +.++++++..++.+ -.|+.+|.. ...||||||||++|||||+++|+||+|
T Consensus 1313 reNI~~g~----~-~at~----eeI~~A~k~A~l~~fI~~LP~GydT~VGe~-G~~LSGGQkQRIaIARALlr~p~ILLL 1382 (1466)
T PTZ00265 1313 YENIKFGK----E-DATR----EDVKRACKFAAIDEFIESLPNKYDTNVGPY-GKSLSGGQKQRIAIARALLREPKILLL 1382 (1466)
T ss_pred HHHHhcCC----C-CCCH----HHHHHHHHHcCCHHHHHhCccccCCccCCC-CCcCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 99998852 1 2232 33566666666543 347788743 457999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHh-hCCCEEEEEecCCCHHHHHhhhhhheeecC---cE-EEEECCCC
Q 000808 854 DEPTSGLDARAAAIVMRTVRNTV-DTGRTVVCTIHQPSIDIFESFDELFLMKRG---GQ-EIYVGPLG 916 (1275)
Q Consensus 854 DEPtsgLD~~~~~~i~~~l~~~~-~~g~tvi~~~H~~~~~~~~~~d~~~~l~~g---g~-~~~~g~~~ 916 (1275)
|||||+||+++.+.|++.|+++. .+++|+|+++|+++ ..+.+|+|++|++| |+ ++..|+.+
T Consensus 1383 DEaTSaLD~~sE~~I~~~L~~~~~~~~~TvIiIaHRls--ti~~aD~Ivvl~~~~~~G~iv~e~Gth~ 1448 (1466)
T PTZ00265 1383 DEATSSLDSNSEKLIEKTIVDIKDKADKTIITIAHRIA--SIKRSDKIVVFNNPDRTGSFVQAHGTHE 1448 (1466)
T ss_pred eCcccccCHHHHHHHHHHHHHHhccCCCEEEEEechHH--HHHhCCEEEEEeCCCCCCCEEEEecCHH
Confidence 99999999999999999999986 35899999999974 56889999999973 66 45789753
No 23
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-61 Score=591.37 Aligned_cols=223 Identities=21% Similarity=0.301 Sum_probs=177.8
Q ss_pred EEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCC
Q 000808 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1275)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 757 (1275)
++++|+++.++. .+++.+|+|+||+|++||+++|+||||||||||+|+|+|..++ +.+|+|.++|.+..
T Consensus 260 l~~~~l~~~~~~----------~~~~~vl~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~~-~~~G~i~~~g~~~~ 328 (506)
T PRK13549 260 LEVRNLTAWDPV----------NPHIKRVDDVSFSLRRGEILGIAGLVGAGRTELVQCLFGAYPG-RWEGEIFIDGKPVK 328 (506)
T ss_pred EEEecCcccccc----------ccccccccceeeEEcCCcEEEEeCCCCCCHHHHHHHHhCCCCC-CCCcEEEECCEECC
Confidence 566777655420 0124599999999999999999999999999999999997641 13799999998753
Q ss_pred cc----cccceEEEeccCC---CCCCCCCHHHHHHHHHhccCCC--CCCHHHHHHHHHHHHHHcCCC-ccccccccCCCC
Q 000808 758 QE----TFTRISGYCEQND---IHSPFVTVYESLLYSAWLRLPP--EVDSETQKMFIEEIMELVELN-PLRQSLVGLPGE 827 (1275)
Q Consensus 758 ~~----~~~~~~~~v~q~~---~~~~~ltv~e~l~~~~~l~~~~--~~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~~ 827 (1275)
.. ..++.++|++|++ .+++.+||.||+.+........ ..+.++.+++++++++.+++. +..++.+
T Consensus 329 ~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~----- 403 (506)
T PRK13549 329 IRNPQQAIAQGIAMVPEDRKRDGIVPVMGVGKNITLAALDRFTGGSRIDDAAELKTILESIQRLKVKTASPELAI----- 403 (506)
T ss_pred CCCHHHHHHCCCEEeCcchhhCCCcCCCCHHHHhhhhhhhhhccCcccChHHHHHHHHHHHHhcCccCCCccccc-----
Confidence 21 1244689999985 4678899999998753211110 012233445688999999996 4667665
Q ss_pred CCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCc
Q 000808 828 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGG 907 (1275)
Q Consensus 828 ~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg 907 (1275)
+.|||||||||+|||+|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||++||+++ ++.+.+|++++|.+ |
T Consensus 404 ~~LSgG~kqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~~sHd~~-~~~~~~d~v~~l~~-G 481 (506)
T PRK13549 404 ARLSGGNQQKAVLAKCLLLNPKILILDEPTRGIDVGAKYEIYKLINQLVQQGVAIIVISSELP-EVLGLSDRVLVMHE-G 481 (506)
T ss_pred ccCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHHHCCCEEEEECCCHH-HHHHhCCEEEEEEC-C
Confidence 469999999999999999999999999999999999999999999999878999999999986 57788999999986 7
Q ss_pred EEEEECCCCcc
Q 000808 908 QEIYVGPLGRH 918 (1275)
Q Consensus 908 ~~~~~g~~~~~ 918 (1275)
+++..|+.++.
T Consensus 482 ~i~~~~~~~~~ 492 (506)
T PRK13549 482 KLKGDLINHNL 492 (506)
T ss_pred EEEEEeccccC
Confidence 89999887653
No 24
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=4.7e-61 Score=588.74 Aligned_cols=205 Identities=20% Similarity=0.309 Sum_probs=170.1
Q ss_pred eeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCCcc----cccceEEEeccCC---CCCCC
Q 000808 705 LLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQE----TFTRISGYCEQND---IHSPF 777 (1275)
Q Consensus 705 iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~~----~~~~~~~~v~q~~---~~~~~ 777 (1275)
+|+|+||++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+.... ..++.+||++|++ .+++.
T Consensus 267 ~l~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~G~~~p--~~G~I~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~~~~ 344 (501)
T PRK10762 267 GVNDVSFTLRKGEILGVSGLMGAGRTELMKVLYGALPR--TSGYVTLDGHEVVTRSPQDGLANGIVYISEDRKRDGLVLG 344 (501)
T ss_pred CcccceEEEcCCcEEEEecCCCCCHHHHHHHHhCCCCC--CceEEEECCEECCCCCHHHHHHCCCEEecCccccCCCcCC
Confidence 79999999999999999999999999999999998653 479999999875421 1345689999996 47788
Q ss_pred CCHHHHHHHHHhccCC---CCCCHHHHHHHHHHHHHHcCCC-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEE
Q 000808 778 VTVYESLLYSAWLRLP---PEVDSETQKMFIEEIMELVELN-PLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFM 853 (1275)
Q Consensus 778 ltv~e~l~~~~~l~~~---~~~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~~~~lSgGerqrv~ia~~l~~~p~illl 853 (1275)
+||.|++.+....... .....++.+++++++++.+++. +..++.+ ..|||||||||+|||+|+.+|++|+|
T Consensus 345 ~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGekqrv~lA~al~~~p~lllL 419 (501)
T PRK10762 345 MSVKENMSLTALRYFSRAGGSLKHADEQQAVSDFIRLFNIKTPSMEQAI-----GLLSGGNQQKVAIARGLMTRPKVLIL 419 (501)
T ss_pred CcHHHHhhhhhhhhhcccccccCHHHHHHHHHHHHHhcCCCCCCccCch-----hhCCHHHHHHHHHHHHHhhCCCEEEE
Confidence 9999999875311100 0012233345688999999995 5667665 46999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcEEEEECCCCcc
Q 000808 854 DEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVGPLGRH 918 (1275)
Q Consensus 854 DEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~~~~ 918 (1275)
||||+|||+.++..+.+.|++++++|+|||++||+++ .+.+.+|++++|++ |+++..|++++.
T Consensus 420 DEPt~~LD~~~~~~l~~~l~~~~~~g~tviivtHd~~-~~~~~~d~v~~l~~-G~i~~~~~~~~~ 482 (501)
T PRK10762 420 DEPTRGVDVGAKKEIYQLINQFKAEGLSIILVSSEMP-EVLGMSDRILVMHE-GRISGEFTREQA 482 (501)
T ss_pred cCCCCCCCHhHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHhhCCEEEEEEC-CEEEEEeccccC
Confidence 9999999999999999999999877999999999986 57788999999986 789999987643
No 25
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.4e-61 Score=596.96 Aligned_cols=227 Identities=21% Similarity=0.216 Sum_probs=182.8
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 756 (1275)
-++++|+++.+...... .......+.+|+||||+|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 313 ~L~~~~l~~~y~~~~~~--~~~~~~~~~~l~~vs~~i~~Ge~~~lvG~nGsGKSTLlk~i~Gl~~--p~~G~I~~~g~~i 388 (623)
T PRK10261 313 ILQVRNLVTRFPLRSGL--LNRVTREVHAVEKVSFDLWPGETLSLVGESGSGKSTTGRALLRLVE--SQGGEIIFNGQRI 388 (623)
T ss_pred eEEEeeeEEEEcCCCcc--ccccCCceEEEeeeEeEEcCCCEEEEECCCCCCHHHHHHHHHcCCC--CCCcEEEECCEEC
Confidence 48899999887421000 0000012469999999999999999999999999999999999875 3479999999875
Q ss_pred Ccc------cccceEEEeccCC--CCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCC-ccccccccCCCC
Q 000808 757 KQE------TFTRISGYCEQND--IHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELN-PLRQSLVGLPGE 827 (1275)
Q Consensus 757 ~~~------~~~~~~~~v~q~~--~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~~ 827 (1275)
... .+++.++|++|++ .+++.+||.|++.+....+. ....++.++++.++++.+||. +..++.+
T Consensus 389 ~~~~~~~~~~~~~~i~~v~Q~~~~~l~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~L~~~gL~~~~~~~~~----- 461 (623)
T PRK10261 389 DTLSPGKLQALRRDIQFIFQDPYASLDPRQTVGDSIMEPLRVHG--LLPGKAAAARVAWLLERVGLLPEHAWRYP----- 461 (623)
T ss_pred CcCCHHHHHHhcCCeEEEecCchhhcCCCCCHHHHHHHHHHHcC--CCCHHHHHHHHHHHHHHcCCCHHHhhCCc-----
Confidence 321 2356799999997 57889999999987654321 112344556788999999996 4566665
Q ss_pred CCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhhhhheeecC
Q 000808 828 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDELFLMKRG 906 (1275)
Q Consensus 828 ~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~g 906 (1275)
.+|||||||||+|||||+.+|++|||||||+|||+.++..+.++|++++++ |.|||++|||++ .+...+|++++|.+
T Consensus 462 ~~LSgGqrQRv~iAraL~~~p~llllDEPts~LD~~~~~~i~~ll~~l~~~~g~tvi~isHdl~-~v~~~~dri~vl~~- 539 (623)
T PRK10261 462 HEFSGGQRQRICIARALALNPKVIIADEAVSALDVSIRGQIINLLLDLQRDFGIAYLFISHDMA-VVERISHRVAVMYL- 539 (623)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-
Confidence 479999999999999999999999999999999999999999999998765 899999999986 56788999999986
Q ss_pred cEEEEECCCC
Q 000808 907 GQEIYVGPLG 916 (1275)
Q Consensus 907 g~~~~~g~~~ 916 (1275)
|+++..|++.
T Consensus 540 G~iv~~g~~~ 549 (623)
T PRK10261 540 GQIVEIGPRR 549 (623)
T ss_pred CEEEEecCHH
Confidence 7999999874
No 26
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.1e-61 Score=591.12 Aligned_cols=202 Identities=20% Similarity=0.315 Sum_probs=167.7
Q ss_pred eeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCCcc----cccceEEEeccC---CCCCCC
Q 000808 705 LLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQE----TFTRISGYCEQN---DIHSPF 777 (1275)
Q Consensus 705 iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~~----~~~~~~~~v~q~---~~~~~~ 777 (1275)
+|+|+|+++++||+++|+||||||||||+|+|+|..++ .+|+|.++|.+.... ..++.+||++|+ ..+++.
T Consensus 278 ~l~~isl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~p--~~G~I~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~ 355 (510)
T PRK09700 278 KVRDISFSVCRGEILGFAGLVGSGRTELMNCLFGVDKR--AGGEIRLNGKDISPRSPLDAVKKGMAYITESRRDNGFFPN 355 (510)
T ss_pred cccceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcC--CCCeEEECCEECCCCCHHHHHHCCcEEccCccccCCCcCC
Confidence 89999999999999999999999999999999998653 479999999875321 224568999998 457888
Q ss_pred CCHHHHHHHHHhcc---CCC--C-CCHHHHHHHHHHHHHHcCCC-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcE
Q 000808 778 VTVYESLLYSAWLR---LPP--E-VDSETQKMFIEEIMELVELN-PLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSI 850 (1275)
Q Consensus 778 ltv~e~l~~~~~l~---~~~--~-~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~~~~lSgGerqrv~ia~~l~~~p~i 850 (1275)
+||+||+.+....+ ... . ......++.++++++.+++. +..++.+ ..|||||||||+|||+|+.+|++
T Consensus 356 ~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGq~qrv~lAral~~~p~l 430 (510)
T PRK09700 356 FSIAQNMAISRSLKDGGYKGAMGLFHEVDEQRTAENQRELLALKCHSVNQNI-----TELSGGNQQKVLISKWLCCCPEV 430 (510)
T ss_pred CcHHHHhccccccccccccccccccChHHHHHHHHHHHHhcCCCCCCccCcc-----ccCChHHHHHHHHHHHHhcCCCE
Confidence 99999998653211 000 0 11222335678999999996 6677776 46999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcEEEEECCC
Q 000808 851 IFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVGPL 915 (1275)
Q Consensus 851 lllDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 915 (1275)
|||||||+|||+.++..+.+.|++++++|+|||++|||+. .+.+.+|++++|.+ |+++..++.
T Consensus 431 LlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~vsHd~~-~~~~~~d~i~~l~~-G~i~~~~~~ 493 (510)
T PRK09700 431 IIFDEPTRGIDVGAKAEIYKVMRQLADDGKVILMVSSELP-EIITVCDRIAVFCE-GRLTQILTN 493 (510)
T ss_pred EEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHhhCCEEEEEEC-CEEEEEecC
Confidence 9999999999999999999999998877999999999985 57788999999986 788888866
No 27
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=1.8e-60 Score=586.78 Aligned_cols=217 Identities=23% Similarity=0.322 Sum_probs=175.3
Q ss_pred EEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEc-Ccc-
Q 000808 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITIS-GYP- 755 (1275)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~-g~~- 755 (1275)
++++|+++.+... ..+++.+|+|+||+|++||+++|+||||||||||+++|+|..+ +.+|+|.++ |.+
T Consensus 280 l~~~~l~~~~~~~--------~~~~~~il~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~Gl~~--p~~G~i~~~~g~~~ 349 (520)
T TIGR03269 280 IKVRNVSKRYISV--------DRGVVKAVDNVSLEVKEGEIFGIVGTSGAGKTTLSKIIAGVLE--PTSGEVNVRVGDEW 349 (520)
T ss_pred EEEeccEEEeccC--------CCCCceEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEEecCCcc
Confidence 6778888776310 0112469999999999999999999999999999999999865 347999996 532
Q ss_pred --CCc------ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCc-----cccccc
Q 000808 756 --KKQ------ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNP-----LRQSLV 822 (1275)
Q Consensus 756 --~~~------~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~-----~~~~~~ 822 (1275)
... ...++.++|++|++.+++.+||.|++.+...+. ...+..+++++++++.+++.+ ..++.+
T Consensus 350 ~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~----~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~ 425 (520)
T TIGR03269 350 VDMTKPGPDGRGRAKRYIGILHQEYDLYPHRTVLDNLTEAIGLE----LPDELARMKAVITLKMVGFDEEKAEEILDKYP 425 (520)
T ss_pred ccccccchhhHHHHhhhEEEEccCcccCCCCcHHHHHHHHHHcC----CCHHHHHHHHHHHHHhCCCCCccchhhhhCCh
Confidence 111 112456899999998889999999998754321 122333456889999999975 345554
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhhhhh
Q 000808 823 GLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDELF 901 (1275)
Q Consensus 823 ~~~~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~ 901 (1275)
..|||||||||+|||||+.+|++|+|||||+|||+.++..+++.|++++++ |.|||++||+++ .+.+.+|+++
T Consensus 426 -----~~LSgGq~qrv~laral~~~p~lLllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vsHd~~-~~~~~~d~i~ 499 (520)
T TIGR03269 426 -----DELSEGERHRVALAQVLIKEPRIVILDEPTGTMDPITKVDVTHSILKAREEMEQTFIIVSHDMD-FVLDVCDRAA 499 (520)
T ss_pred -----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHH-HHHHhCCEEE
Confidence 479999999999999999999999999999999999999999999998764 899999999986 5778899999
Q ss_pred eeecCcEEEEECCC
Q 000808 902 LMKRGGQEIYVGPL 915 (1275)
Q Consensus 902 ~l~~gg~~~~~g~~ 915 (1275)
+|.+ |+++..|++
T Consensus 500 ~l~~-G~i~~~g~~ 512 (520)
T TIGR03269 500 LMRD-GKIVKIGDP 512 (520)
T ss_pred EEEC-CEEEEECCH
Confidence 9986 789988876
No 28
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=2.9e-60 Score=585.57 Aligned_cols=202 Identities=23% Similarity=0.320 Sum_probs=169.4
Q ss_pred cceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCCcc------cccceEEEeccCC--CC
Q 000808 703 LMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQE------TFTRISGYCEQND--IH 774 (1275)
Q Consensus 703 ~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~~------~~~~~~~~v~q~~--~~ 774 (1275)
+.+|+|+|++|++||+++|+||||||||||+|+|+|..+ .+|+|.++|.++... .+++.++|++|++ .+
T Consensus 299 ~~il~~isl~i~~Ge~~~i~G~nGsGKSTLlk~l~Gl~~---~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~l 375 (529)
T PRK15134 299 NVVVKNISFTLRPGETLGLVGESGSGKSTTGLALLRLIN---SQGEIWFDGQPLHNLNRRQLLPVRHRIQVVFQDPNSSL 375 (529)
T ss_pred ceeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhCcCC---CCcEEEECCEEccccchhhHHHhhhceEEEEeCchhhc
Confidence 469999999999999999999999999999999999763 379999999875321 1245689999996 47
Q ss_pred CCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCC-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEE
Q 000808 775 SPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELN-PLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFM 853 (1275)
Q Consensus 775 ~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~~~~lSgGerqrv~ia~~l~~~p~illl 853 (1275)
++.+||.||+.+....+.. .....+.+++++++++.+++. +..+..+ ..|||||||||+|||+|+.+|++|+|
T Consensus 376 ~~~~tv~e~l~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~llll 449 (529)
T PRK15134 376 NPRLNVLQIIEEGLRVHQP-TLSAAQREQQVIAVMEEVGLDPETRHRYP-----AEFSGGQRQRIAIARALILKPSLIIL 449 (529)
T ss_pred CCcccHHHHHHHHHHhccc-cCChHHHHHHHHHHHHHcCCCHHHHhcCC-----ccCCHHHHHHHHHHHHHhCCCCEEEe
Confidence 7889999999886533211 122334456788999999997 4566655 46999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhhhhheeecCcEEEEECCC
Q 000808 854 DEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVGPL 915 (1275)
Q Consensus 854 DEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 915 (1275)
||||+|||+.++..+.+.|++++++ |+|||++||+++ .+.+.+|++++|++ |+++..|++
T Consensus 450 DEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsHd~~-~~~~~~d~i~~l~~-G~i~~~~~~ 510 (529)
T PRK15134 450 DEPTSSLDKTVQAQILALLKSLQQKHQLAYLFISHDLH-VVRALCHQVIVLRQ-GEVVEQGDC 510 (529)
T ss_pred eCCccccCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHH-HHHHhcCeEEEEEC-CEEEEEcCH
Confidence 9999999999999999999999765 899999999985 56778999999986 789998876
No 29
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=1.9e-60 Score=583.33 Aligned_cols=204 Identities=20% Similarity=0.227 Sum_probs=167.1
Q ss_pred eeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCCcc----cccceEEEeccCC---CCCCC
Q 000808 705 LLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQE----TFTRISGYCEQND---IHSPF 777 (1275)
Q Consensus 705 iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~~----~~~~~~~~v~q~~---~~~~~ 777 (1275)
+|+|+|+++++||++||+||||||||||+++|+|..++ .+|+|.++|.++... ..++.++|++|++ .+++.
T Consensus 278 ~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~Gl~~p--~~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~l~~~ 355 (510)
T PRK15439 278 GFRNISLEVRAGEILGLAGVVGAGRTELAETLYGLRPA--RGGRIMLNGKEINALSTAQRLARGLVYLPEDRQSSGLYLD 355 (510)
T ss_pred CccceeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCC--CCcEEEECCEECCCCCHHHHHhCCcEECCCChhhCCccCC
Confidence 68999999999999999999999999999999997653 479999999875421 1234689999984 47788
Q ss_pred CCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCC-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCC
Q 000808 778 VTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELN-PLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEP 856 (1275)
Q Consensus 778 ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~~~~lSgGerqrv~ia~~l~~~p~illlDEP 856 (1275)
+|+.|++......+..........++.++++++.+|+. +..++.+ +.|||||||||+||++|+.+|++||||||
T Consensus 356 ~t~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgG~kqrl~la~al~~~p~lLlLDEP 430 (510)
T PRK15439 356 APLAWNVCALTHNRRGFWIKPARENAVLERYRRALNIKFNHAEQAA-----RTLSGGNQQKVLIAKCLEASPQLLIVDEP 430 (510)
T ss_pred CcHHHHHHhhhhhhhccccChHHHHHHHHHHHHHcCCCCCCccCcc-----ccCCcHHHHHHHHHHHHhhCCCEEEECCC
Confidence 99999986421111110011222345678999999997 6667765 46999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcEEEEECCCCc
Q 000808 857 TSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVGPLGR 917 (1275)
Q Consensus 857 tsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~~~ 917 (1275)
|+|||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|++++|.+ |+++..|.+++
T Consensus 431 t~gLD~~~~~~l~~~l~~l~~~g~tiIivsHd~~-~i~~~~d~i~~l~~-G~i~~~~~~~~ 489 (510)
T PRK15439 431 TRGVDVSARNDIYQLIRSIAAQNVAVLFISSDLE-EIEQMADRVLVMHQ-GEISGALTGAA 489 (510)
T ss_pred CcCcChhHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEEcccc
Confidence 9999999999999999999878999999999986 57788999999985 79998887754
No 30
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=5.3e-60 Score=580.46 Aligned_cols=206 Identities=19% Similarity=0.300 Sum_probs=169.4
Q ss_pred cceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCCc----ccccceEEEeccCC---CCC
Q 000808 703 LMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ----ETFTRISGYCEQND---IHS 775 (1275)
Q Consensus 703 ~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~----~~~~~~~~~v~q~~---~~~ 775 (1275)
+.+|+|+||++++||+++|+||||||||||||+|+|..++ +.+|+|.++|.+... ...++.+||++|+. .++
T Consensus 273 ~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~l~ 351 (500)
T TIGR02633 273 RKRVDDVSFSLRRGEILGVAGLVGAGRTELVQALFGAYPG-KFEGNVFINGKPVDIRNPAQAIRAGIAMVPEDRKRHGIV 351 (500)
T ss_pred ccccccceeEEeCCcEEEEeCCCCCCHHHHHHHHhCCCCC-CCCeEEEECCEECCCCCHHHHHhCCCEEcCcchhhCCcC
Confidence 3599999999999999999999999999999999998652 137999999987642 12345689999995 478
Q ss_pred CCCCHHHHHHHHHh--ccCCCCCCHHHHHHHHHHHHHHcCCCc-cccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEE
Q 000808 776 PFVTVYESLLYSAW--LRLPPEVDSETQKMFIEEIMELVELNP-LRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIF 852 (1275)
Q Consensus 776 ~~ltv~e~l~~~~~--l~~~~~~~~~~~~~~~~~~l~~l~l~~-~~~~~~~~~~~~~lSgGerqrv~ia~~l~~~p~ill 852 (1275)
+.+||+|++.+... ............+++++++++.+++.+ ..++.+ ..||||||||++|||+|+.+|++|+
T Consensus 352 ~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGqkqrv~la~al~~~p~lll 426 (500)
T TIGR02633 352 PILGVGKNITLSVLKSFCFKMRIDAAAELQIIGSAIQRLKVKTASPFLPI-----GRLSGGNQQKAVLAKMLLTNPRVLI 426 (500)
T ss_pred CCCCHHHHhcchhhhhhccCCcCCHHHHHHHHHHHHHhcCccCCCccCcc-----ccCCHHHHHHHHHHHHHhhCCCEEE
Confidence 89999999987532 110001122334466889999999964 456665 4699999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcEEEEECCCC
Q 000808 853 MDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVGPLG 916 (1275)
Q Consensus 853 lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~~ 916 (1275)
|||||+|||+.++..+++.|++++++|.|||++|||++ ++.+.+|++++|.+ |+++..++.+
T Consensus 427 LDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~-~~~~~~d~v~~l~~-G~i~~~~~~~ 488 (500)
T TIGR02633 427 LDEPTRGVDVGAKYEIYKLINQLAQEGVAIIVVSSELA-EVLGLSDRVLVIGE-GKLKGDFVNH 488 (500)
T ss_pred EcCCCCCcCHhHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEEccc
Confidence 99999999999999999999999888999999999986 57788999999986 7888877654
No 31
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.9e-60 Score=577.45 Aligned_cols=207 Identities=19% Similarity=0.311 Sum_probs=171.0
Q ss_pred ceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCCc----ccccceEEEeccCC---CCCC
Q 000808 704 MLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ----ETFTRISGYCEQND---IHSP 776 (1275)
Q Consensus 704 ~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~----~~~~~~~~~v~q~~---~~~~ 776 (1275)
.+++|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++ .+++
T Consensus 267 ~~l~~isl~i~~Ge~~~iiG~NGsGKSTLlk~l~G~~~--p~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~ 344 (501)
T PRK11288 267 GLREPISFSVRAGEIVGLFGLVGAGRSELMKLLYGATR--RTAGQVYLDGKPIDIRSPRDAIRAGIMLCPEDRKAEGIIP 344 (501)
T ss_pred CcccceeEEEeCCcEEEEEcCCCCCHHHHHHHHcCCCc--CCCceEEECCEECCCCCHHHHHhCCCEEcCcCHhhCCCcC
Confidence 38999999999999999999999999999999999865 347999999987532 12245689999986 4788
Q ss_pred CCCHHHHHHHHHhccC-CCC--CCHHHHHHHHHHHHHHcCCC-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEE
Q 000808 777 FVTVYESLLYSAWLRL-PPE--VDSETQKMFIEEIMELVELN-PLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIF 852 (1275)
Q Consensus 777 ~ltv~e~l~~~~~l~~-~~~--~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~~~~lSgGerqrv~ia~~l~~~p~ill 852 (1275)
.+|+.|++.+...... +.. ......++.++++++.+++. +..++.++ .|||||||||+||++|+.+|++||
T Consensus 345 ~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----~LSgGq~qrl~la~al~~~p~lll 419 (501)
T PRK11288 345 VHSVADNINISARRHHLRAGCLINNRWEAENADRFIRSLNIKTPSREQLIM-----NLSGGNQQKAILGRWLSEDMKVIL 419 (501)
T ss_pred CCCHHHHhccccchhhcccccccChHHHHHHHHHHHHhcCcccCCccCccc-----cCCHHHHHHHHHHHHHccCCCEEE
Confidence 8999999976432110 000 11223345678999999994 56777764 699999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcEEEEECCCCccc
Q 000808 853 MDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVGPLGRHS 919 (1275)
Q Consensus 853 lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~~~~~ 919 (1275)
|||||+|||+.++..+++.|++++++|.|||++|||++ ++.+.+|++++|.+ |++++.|.+++..
T Consensus 420 LDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~-~~~~~~d~i~~l~~-g~i~~~~~~~~~~ 484 (501)
T PRK11288 420 LDEPTRGIDVGAKHEIYNVIYELAAQGVAVLFVSSDLP-EVLGVADRIVVMRE-GRIAGELAREQAT 484 (501)
T ss_pred EcCCCCCCCHhHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHhhCCEEEEEEC-CEEEEEEccccCC
Confidence 99999999999999999999999888999999999986 57789999999985 7899999886543
No 32
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.6e-59 Score=567.47 Aligned_cols=216 Identities=17% Similarity=0.248 Sum_probs=170.6
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 756 (1275)
.++++|+++.. +.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 250 ~i~~~~l~~~~---------------~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i 312 (491)
T PRK10982 250 ILEVRNLTSLR---------------QPSIRDVSFDLHKGEILGIAGLVGAKRTDIVETLFGIRE--KSAGTITLHGKKI 312 (491)
T ss_pred EEEEeCccccc---------------CcccceeeEEEeCCcEEEEecCCCCCHHHHHHHHcCCCc--CCccEEEECCEEC
Confidence 36777776541 248999999999999999999999999999999999875 3489999999876
Q ss_pred Ccc----cccceEEEeccCC---CCCCCCCHHHHHHHHH--hccCCCC-CCHHHHHHHHHHHHHHcCCC-ccccccccCC
Q 000808 757 KQE----TFTRISGYCEQND---IHSPFVTVYESLLYSA--WLRLPPE-VDSETQKMFIEEIMELVELN-PLRQSLVGLP 825 (1275)
Q Consensus 757 ~~~----~~~~~~~~v~q~~---~~~~~ltv~e~l~~~~--~l~~~~~-~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~ 825 (1275)
... ..++.++|++|+. .+++.+|+.++..+.. ....... ......++.++++++.+++. +..++.+
T Consensus 313 ~~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~--- 389 (491)
T PRK10982 313 NNHNANEAINHGFALVTEERRSTGIYAYLDIGFNSLISNIRNYKNKVGLLDNSRMKSDTQWVIDSMRVKTPGHRTQI--- 389 (491)
T ss_pred CCCCHHHHHHCCCEEcCCchhhCCcccCCcHHHheehhhhhhhcccccccCcHHHHHHHHHHHHhcCccCCCccccc---
Confidence 431 1244589999985 3678888887743221 0000001 12223345678899999995 4456665
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeec
Q 000808 826 GESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKR 905 (1275)
Q Consensus 826 ~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~ 905 (1275)
..|||||||||+||++|+.+|+||+|||||+|||+.++..+++.|+++.++|+|||++||+++ ++...+|++++|.+
T Consensus 390 --~~LSgGq~qrv~la~al~~~p~illLDEPt~gLD~~~~~~~~~~l~~l~~~~~tvi~vsHd~~-~~~~~~d~v~~l~~ 466 (491)
T PRK10982 390 --GSLSGGNQQKVIIGRWLLTQPEILMLDEPTRGIDVGAKFEIYQLIAELAKKDKGIIIISSEMP-ELLGITDRILVMSN 466 (491)
T ss_pred --ccCCcHHHHHHHHHHHHhcCCCEEEEcCCCcccChhHHHHHHHHHHHHHHCCCEEEEECCChH-HHHhhCCEEEEEEC
Confidence 479999999999999999999999999999999999999999999998878999999999986 57789999999986
Q ss_pred CcEEEEECCCC
Q 000808 906 GGQEIYVGPLG 916 (1275)
Q Consensus 906 gg~~~~~g~~~ 916 (1275)
|+++..+++.
T Consensus 467 -g~i~~~~~~~ 476 (491)
T PRK10982 467 -GLVAGIVDTK 476 (491)
T ss_pred -CEEEEEEccc
Confidence 7888777664
No 33
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=1.1e-57 Score=558.49 Aligned_cols=215 Identities=20% Similarity=0.292 Sum_probs=167.3
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 756 (1275)
.++++|+++.++ ++.+|+|+||++++||+++|+||||||||||+++|+|..+. ..+|+|.++|.+.
T Consensus 260 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~G~~~~-~~~G~i~~~g~~~ 325 (490)
T PRK10938 260 RIVLNNGVVSYN-------------DRPILHNLSWQVNPGEHWQIVGPNGAGKSTLLSLITGDHPQ-GYSNDLTLFGRRR 325 (490)
T ss_pred eEEEeceEEEEC-------------CeeEEeeceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCc-ccCCeEEEecccC
Confidence 488999988773 23599999999999999999999999999999999996431 1379999999764
Q ss_pred Cc----ccccceEEEeccCCCCCCC--CCHHHHHHHHHhc--cCCCCCCHHHHHHHHHHHHHHcCCCc-cccccccCCCC
Q 000808 757 KQ----ETFTRISGYCEQNDIHSPF--VTVYESLLYSAWL--RLPPEVDSETQKMFIEEIMELVELNP-LRQSLVGLPGE 827 (1275)
Q Consensus 757 ~~----~~~~~~~~~v~q~~~~~~~--ltv~e~l~~~~~l--~~~~~~~~~~~~~~~~~~l~~l~l~~-~~~~~~~~~~~ 827 (1275)
.. ...++.++|++|++.++.. .|+++++.+...- ....... .+.+++++++++.+++.+ ..++.+
T Consensus 326 ~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~l~~~~~~~~~----- 399 (490)
T PRK10938 326 GSGETIWDIKKHIGYVSSSLHLDYRVSTSVRNVILSGFFDSIGIYQAVS-DRQQKLAQQWLDILGIDKRTADAPF----- 399 (490)
T ss_pred CCCCCHHHHHhhceEECHHHHhhcccCCcHHHHHHhccccccccccCCC-HHHHHHHHHHHHHcCCchhhccCch-----
Confidence 21 1234568999998765433 4677766543210 1111111 223456889999999987 667665
Q ss_pred CCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCC-CEEEEEecCCCHHHHH-hhhhhheeec
Q 000808 828 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTG-RTVVCTIHQPSIDIFE-SFDELFLMKR 905 (1275)
Q Consensus 828 ~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g-~tvi~~~H~~~~~~~~-~~d~~~~l~~ 905 (1275)
..|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|++++++| .|||++||+++ ++.+ .+|++++|.+
T Consensus 400 ~~LSgGq~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~L~~l~~~~~~tviivsHd~~-~~~~~~~d~v~~l~~ 478 (490)
T PRK10938 400 HSLSWGQQRLALIVRALVKHPTLLILDEPLQGLDPLNRQLVRRFVDVLISEGETQLLFVSHHAE-DAPACITHRLEFVPD 478 (490)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCcEEEEEecchh-hhhhhhheeEEEecC
Confidence 4699999999999999999999999999999999999999999999998765 57999999986 4555 5799999986
Q ss_pred CcEEEEEC
Q 000808 906 GGQEIYVG 913 (1275)
Q Consensus 906 gg~~~~~g 913 (1275)
|+++..-
T Consensus 479 -G~i~~~~ 485 (490)
T PRK10938 479 -GDIYRYV 485 (490)
T ss_pred -CceEEee
Confidence 6766543
No 34
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]
Probab=100.00 E-value=7.4e-57 Score=487.02 Aligned_cols=452 Identities=24% Similarity=0.314 Sum_probs=350.2
Q ss_pred EEEeCCCCCCHHHHHHHHhCCCCC--CCceeEEEEECCccCCCccc-------cceEEEeccccc--cCCCCCHHHHHHH
Q 000808 2 TLLLGPPCSGKTTLLLALAGKLDS--KLKFSGRVTYNGHGMDEFVP-------QRTAAYISQHDV--HIGEMTVRETLAF 70 (1275)
Q Consensus 2 ~~ilG~~GsGKSTLl~~L~G~~~~--~~~~~G~v~~~g~~~~~~~~-------~~~~~yv~Q~~~--~~~~lTv~e~l~f 70 (1275)
+||||.||||||-..+.++|+++. ....+|+|.++|.++-.... ...|++++|+|- +-|-.|+...+.-
T Consensus 39 lAlVGESGSGKSvTa~sim~LLp~~~~~~~sg~i~f~G~dll~~se~~lr~iRG~~I~MIFQEPMtSLNPl~tIg~Qi~E 118 (534)
T COG4172 39 LALVGESGSGKSVTALSILGLLPSPAAAHPSGSILFDGEDLLAASERQLRGVRGNKIGMIFQEPMTSLNPLHTIGKQLAE 118 (534)
T ss_pred EEEEecCCCCccHHHHHHHHhcCCCcccCccceeEEcChhhhcCCHHHHhhhcccceEEEecccccccCcHhHHHHHHHH
Confidence 699999999999999999999875 34468999999998744321 147999999864 4455688888877
Q ss_pred HHhccCCCCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCcccccccccc
Q 000808 71 SARCQGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQK 150 (1275)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqr 150 (1275)
..+++.-. ...+++.++-++|+..|+++..... +.+++.||||||
T Consensus 119 ~l~~Hrg~---------------------------------~~~~Ar~r~lelL~~VgI~~p~~rl--~~yPHeLSGGqR 163 (534)
T COG4172 119 VLRLHRGL---------------------------------SRAAARARALELLELVGIPEPEKRL--DAYPHELSGGQR 163 (534)
T ss_pred HHHHHhcc---------------------------------cHHHHHHHHHHHHHHcCCCchhhhh--hhCCcccCcchh
Confidence 66554210 1112333456789999999876543 578999999999
Q ss_pred chhhHHHHHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecCh
Q 000808 151 KRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPR 230 (1275)
Q Consensus 151 qRvsiA~al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~ 230 (1275)
|||.||.||+.+|++|+-||||++||.....+|.+.|+++.+.. +-.++.|+|+..-+-+++|||.||.+|++++.|+.
T Consensus 164 QRVMIAMALan~P~lLIADEPTTALDVtvQaQIL~Ll~~Lq~~~-gMa~lfITHDL~iVr~~ADrV~VM~~G~ivE~~~t 242 (534)
T COG4172 164 QRVMIAMALANEPDLLIADEPTTALDVTVQAQILDLLKELQAEL-GMAILFITHDLGIVRKFADRVYVMQHGEIVETGTT 242 (534)
T ss_pred hHHHHHHHHcCCCCeEeecCCcchhhhhhHHHHHHHHHHHHHHh-CcEEEEEeccHHHHHHhhhhEEEEeccEEeecCcH
Confidence 99999999999999999999999999999999999999987654 67777899999999999999999999999999976
Q ss_pred hhHHHHHHhCCCCCCCCCChhhHHHhhcCchhhhhhhhccCCCCccCCHHHHHHHHhhchhhHHHHHhhcCCcccCCCCC
Q 000808 231 ELVLDFFESMGFKCPERKGVADFLQEVTSRKDQQQYWVHKEMPYRFVTAQEFSEAFQSFTVGQKLADELRTPFDKCKSHP 310 (1275)
Q Consensus 231 ~~~~~~f~~~G~~~p~~~~~ad~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (1275)
+.+.. + |.| |
T Consensus 243 ~~lF~---~-----PqH-------------------------p------------------------------------- 252 (534)
T COG4172 243 ETLFA---A-----PQH-------------------------P------------------------------------- 252 (534)
T ss_pred HHHhh---C-----CCC-------------------------h-------------------------------------
Confidence 55431 0 000 0
Q ss_pred ccccccccccCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhccccCCCCCcCCccceehHHHHHHHHHH
Q 000808 311 AALTTKMYGVGKKELLKANISRELLLMKRNSFVYIFKLTQLSSMALVSMTLFFRTKMHKDSVSDGGIYVGATFFAVMMTM 390 (1275)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~~~~g~~f~~i~~~~ 390 (1275)
| . |.+.
T Consensus 253 -------Y-----------T-r~Ll------------------------------------------------------- 258 (534)
T COG4172 253 -------Y-----------T-RKLL------------------------------------------------------- 258 (534)
T ss_pred -------H-----------H-HHHH-------------------------------------------------------
Confidence 0 0 0000
Q ss_pred HhhhHHHHHHhhcchhHHHhhhcCCcchhHHHHHHHHHHhhHHHHHHHHHHhhhhhcccccCChhHHHHHHHHHHHHHHH
Q 000808 391 FNGMSDISMTIAKLPVFYKQRDLRFYAAWAYALPAWILKIPISFLEVAVWVFLTYYVIGFDPNIGRLFKQFLLLLLVNQM 470 (1275)
Q Consensus 391 ~~~~~~~~~~~~~~~v~~~~r~~~~y~~~~y~l~~~i~~~p~~~~~~~~~~~i~Y~l~gl~~~~g~~~~~~l~~~l~~~~ 470 (1275)
T Consensus 259 -------------------------------------------------------------------------------- 258 (534)
T COG4172 259 -------------------------------------------------------------------------------- 258 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccccccCCCccchhhhhHhhCHHHHHHHHHHHhHcCCCccccccCCCc
Q 000808 471 ASALFRFIAAAGRNMIVAMSFGSFVLLVLFAFGGFVLSRDDIKKWWVWGYWCSPMMYAQNAIVANEFFGHSWRKFTSNSN 550 (1275)
Q Consensus 471 ~~~l~~~i~~~~~~~~ia~~~~~~~~~~~~l~~gf~i~~~~i~~~~~w~~~~sp~~y~~~al~~~ef~~~~~~~~~~~~~ 550 (1275)
T Consensus 259 -------------------------------------------------------------------------------- 258 (534)
T COG4172 259 -------------------------------------------------------------------------------- 258 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccchHHHhhhcCcccCCcchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCCcceeccCCcccccCCcCCCCcccccCCCC
Q 000808 551 ETLGVQVLKSRGFFPHAYWYWLGLGATIGFVLLFNIGFTLSLTFLNQFEKPRAVISDESESNDLGNRIGGTAQLSTHGSN 630 (1275)
Q Consensus 551 ~~~g~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~i~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 630 (1275)
.
T Consensus 259 --------~----------------------------------------------------------------------- 259 (534)
T COG4172 259 --------A----------------------------------------------------------------------- 259 (534)
T ss_pred --------h-----------------------------------------------------------------------
Confidence 0
Q ss_pred CCCCCCCCcccccccchhhhhcccccccccccCccCCCcccCCCCcEEEEEeEEEEEeccchhhhccccccccceeeceE
Q 000808 631 SSHKTCSESEDITVKDSFSQLLSQREVTVGAIQPKKRGMVLPFEPHSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVS 710 (1275)
Q Consensus 631 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs 710 (1275)
.+|.. . .....+..+..++.+|++..++.+..+-.. ..+...++++||
T Consensus 260 -aeP~g---~--------------------------~~p~~~~~~~ll~~~~v~v~f~i~~g~~~r--~~~~~~AVd~is 307 (534)
T COG4172 260 -AEPSG---D--------------------------PPPLPEDAPVLLEVEDLRVWFPIKGGFLRR--TVDHLRAVDGIS 307 (534)
T ss_pred -cCCCC---C--------------------------CCCCCCCCCceEEecceEEEEecCCccccc--cchheEEeccce
Confidence 00000 0 000000123457777777766654322111 123456999999
Q ss_pred EEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCCc------ccccceEEEeccCCC--CCCCCCHHH
Q 000808 711 GAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ------ETFTRISGYCEQNDI--HSPFVTVYE 782 (1275)
Q Consensus 711 ~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~------~~~~~~~~~v~q~~~--~~~~ltv~e 782 (1275)
+++++||.+||+|.||||||||-.+|.+...+ +|+|.++|.++.. ...++.+-.|+|||. +.|.+||.+
T Consensus 308 l~L~~gqTlGlVGESGSGKsTlG~allrL~~s---~G~I~F~G~~i~~~~~~~mrplR~~mQvVFQDPygSLsPRmtV~q 384 (534)
T COG4172 308 LTLRRGQTLGLVGESGSGKSTLGLALLRLIPS---QGEIRFDGQDIDGLSRKEMRPLRRRMQVVFQDPYGSLSPRMTVGQ 384 (534)
T ss_pred eEecCCCeEEEEecCCCCcchHHHHHHhhcCc---CceEEECCccccccChhhhhhhhhhceEEEeCCCCCCCcccCHHH
Confidence 99999999999999999999999999997753 4999999998753 234667889999985 678999999
Q ss_pred HHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccc-cccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCC
Q 000808 783 SLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLR-QSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 861 (1275)
Q Consensus 783 ~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~-~~~~~~~~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD 861 (1275)
-+.-+.....+ ..+..++++++.++++.+||.+.. +++ +.++|||||||++|||||+.+|++++||||||+||
T Consensus 385 II~EGL~vh~~-~ls~~eR~~rv~~aL~EVGLDp~~r~RY-----PhEFSGGQRQRIAIARAliLkP~~i~LDEPTSALD 458 (534)
T COG4172 385 IIEEGLRVHEP-KLSAAERDQRVIEALEEVGLDPATRNRY-----PHEFSGGQRQRIAIARALILKPELILLDEPTSALD 458 (534)
T ss_pred HhhhhhhhcCC-CCCHHHHHHHHHHHHHHcCCChhHhhcC-----CcccCcchhhHHHHHHHHhcCCcEEEecCCchHhh
Confidence 98877666543 457788999999999999997642 332 35799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhh-CCCEEEEEecCCCHHHHHhhhhhheeecCcEEEEECCC
Q 000808 862 ARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVGPL 915 (1275)
Q Consensus 862 ~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 915 (1275)
-.-+.+|+++|+++.+ .|.+-++++||+. -+-.++|++++|.+ |++|..||.
T Consensus 459 ~SVQaQvv~LLr~LQ~k~~LsYLFISHDL~-VvrAl~~~viVm~~-GkiVE~G~~ 511 (534)
T COG4172 459 RSVQAQVLDLLRDLQQKHGLSYLFISHDLA-VVRALCHRVIVMRD-GKIVEQGPT 511 (534)
T ss_pred HHHHHHHHHHHHHHHHHhCCeEEEEeccHH-HHHHhhceEEEEeC-CEEeeeCCH
Confidence 9999999999999875 4899999999986 46789999999996 899999996
No 35
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.1e-56 Score=546.24 Aligned_cols=198 Identities=18% Similarity=0.255 Sum_probs=164.5
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 756 (1275)
.++++|++++++ ++.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.
T Consensus 319 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~--p~~G~i~~~~~-- 381 (530)
T PRK15064 319 ALEVENLTKGFD-------------NGPLFKNLNLLLEAGERLAIIGENGVGKTTLLRTLVGELE--PDSGTVKWSEN-- 381 (530)
T ss_pred eEEEEeeEEeeC-------------CceeecCcEEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCc--
Confidence 589999998873 2359999999999999999999999999999999999865 34799999873
Q ss_pred CcccccceEEEeccCCC--CCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCC-ccccccccCCCCCCCCHH
Q 000808 757 KQETFTRISGYCEQNDI--HSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELN-PLRQSLVGLPGESGLSTE 833 (1275)
Q Consensus 757 ~~~~~~~~~~~v~q~~~--~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~~~~lSgG 833 (1275)
+.+||++|++. +.+.+|++|++.+.. .. . ..+++++++++.+++. +..+..+ ..||||
T Consensus 382 ------~~i~~~~q~~~~~~~~~~t~~~~~~~~~---~~-~----~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgG 442 (530)
T PRK15064 382 ------ANIGYYAQDHAYDFENDLTLFDWMSQWR---QE-G----DDEQAVRGTLGRLLFSQDDIKKSV-----KVLSGG 442 (530)
T ss_pred ------eEEEEEcccccccCCCCCcHHHHHHHhc---cC-C----ccHHHHHHHHHHcCCChhHhcCcc-----cccCHH
Confidence 45899999864 556799999986421 11 1 1134578899999994 5566665 479999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcEEE-EE
Q 000808 834 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQEI-YV 912 (1275)
Q Consensus 834 erqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~-~~ 912 (1275)
||||++||++|+.+|++|+|||||+|||+.+...+.+.|+++ +.|||++||+++ .+...+|++++|.+ |+++ +.
T Consensus 443 q~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~-~~~~~~d~i~~l~~-g~i~~~~ 517 (530)
T PRK15064 443 EKGRMLFGKLMMQKPNVLVMDEPTNHMDMESIESLNMALEKY---EGTLIFVSHDRE-FVSSLATRIIEITP-DGVVDFS 517 (530)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHC---CCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEEcC
Confidence 999999999999999999999999999999999999999886 459999999985 56778999999986 6776 77
Q ss_pred CCC
Q 000808 913 GPL 915 (1275)
Q Consensus 913 g~~ 915 (1275)
|+.
T Consensus 518 g~~ 520 (530)
T PRK15064 518 GTY 520 (530)
T ss_pred CCH
Confidence 765
No 36
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=8.1e-55 Score=538.63 Aligned_cols=201 Identities=21% Similarity=0.304 Sum_probs=163.7
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 756 (1275)
-++++|+++.+. ++.+|+|||++|++||+++|+||||||||||+++|+|..+ +.+|+|.+++ +
T Consensus 324 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~--p~~G~i~~~~-~- 386 (556)
T PRK11819 324 VIEAENLSKSFG-------------DRLLIDDLSFSLPPGGIVGIIGPNGAGKSTLFKMITGQEQ--PDSGTIKIGE-T- 386 (556)
T ss_pred EEEEEeEEEEEC-------------CeeeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECC-c-
Confidence 488999998763 2469999999999999999999999999999999999865 3479999853 1
Q ss_pred CcccccceEEEeccCC-CCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCc-cccccccCCCCCCCCHHH
Q 000808 757 KQETFTRISGYCEQND-IHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNP-LRQSLVGLPGESGLSTEQ 834 (1275)
Q Consensus 757 ~~~~~~~~~~~v~q~~-~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~-~~~~~~~~~~~~~lSgGe 834 (1275)
..+||++|+. .+++.+||+|++.+...... .... +...+++++.+++.+ ..+..+ ..|||||
T Consensus 387 ------~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~---~~~~--~~~~~~~l~~~~l~~~~~~~~~-----~~LSgG~ 450 (556)
T PRK11819 387 ------VKLAYVDQSRDALDPNKTVWEEISGGLDIIK---VGNR--EIPSRAYVGRFNFKGGDQQKKV-----GVLSGGE 450 (556)
T ss_pred ------eEEEEEeCchhhcCCCCCHHHHHHhhccccc---cccc--HHHHHHHHHhCCCChhHhcCch-----hhCCHHH
Confidence 1489999996 67788999999987643221 1111 123457899999964 456655 4699999
Q ss_pred HHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcEEE-EEC
Q 000808 835 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQEI-YVG 913 (1275)
Q Consensus 835 rqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~-~~g 913 (1275)
|||++||++|+.+|++|+|||||+|||+.++..+.+.|+++. | |||++||+++ .+...+|++++|++||++. +.|
T Consensus 451 ~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~--~-tvi~vtHd~~-~~~~~~d~i~~l~~~g~~~~~~g 526 (556)
T PRK11819 451 RNRLHLAKTLKQGGNVLLLDEPTNDLDVETLRALEEALLEFP--G-CAVVISHDRW-FLDRIATHILAFEGDSQVEWFEG 526 (556)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhCC--C-eEEEEECCHH-HHHHhCCEEEEEECCCeEEEecC
Confidence 999999999999999999999999999999999999999872 4 8999999975 5777899999998767765 455
Q ss_pred C
Q 000808 914 P 914 (1275)
Q Consensus 914 ~ 914 (1275)
+
T Consensus 527 ~ 527 (556)
T PRK11819 527 N 527 (556)
T ss_pred C
Confidence 4
No 37
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=100.00 E-value=2.3e-54 Score=534.69 Aligned_cols=201 Identities=19% Similarity=0.281 Sum_probs=163.4
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 756 (1275)
.++++|+++.+. ++.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.+++ +
T Consensus 322 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~--p~~G~i~~~~-~- 384 (552)
T TIGR03719 322 VIEAENLSKGFG-------------DKLLIDDLSFKLPPGGIVGVIGPNGAGKSTLFRMITGQEQ--PDSGTIKIGE-T- 384 (552)
T ss_pred EEEEeeEEEEEC-------------CeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCeEEEECC-c-
Confidence 488999988763 2469999999999999999999999999999999999865 3479999854 1
Q ss_pred CcccccceEEEeccCC-CCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCc-cccccccCCCCCCCCHHH
Q 000808 757 KQETFTRISGYCEQND-IHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNP-LRQSLVGLPGESGLSTEQ 834 (1275)
Q Consensus 757 ~~~~~~~~~~~v~q~~-~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~-~~~~~~~~~~~~~lSgGe 834 (1275)
..+||++|+. .+++.+||.|++.+...... .... +...+++++.+++.+ ..+..+ ..|||||
T Consensus 385 ------~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~---~~~~--~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGe 448 (552)
T TIGR03719 385 ------VKLAYVDQSRDALDPNKTVWEEISGGLDIIQ---LGKR--EVPSRAYVGRFNFKGSDQQKKV-----GQLSGGE 448 (552)
T ss_pred ------eEEEEEeCCccccCCCCcHHHHHHhhccccc---cCcc--hHHHHHHHHhCCCChhHhcCch-----hhCCHHH
Confidence 1489999986 47788999999987643211 1111 123557899999964 456655 4699999
Q ss_pred HHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcEEE-EEC
Q 000808 835 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQEI-YVG 913 (1275)
Q Consensus 835 rqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~-~~g 913 (1275)
||||+||++|+.+|++|+|||||+|||+.+...+.+.|+++. .|||++||+++ .+...+|++++|++||++. +.|
T Consensus 449 ~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~---~~viivsHd~~-~~~~~~d~i~~l~~~~~~~~~~g 524 (552)
T TIGR03719 449 RNRVHLAKTLKSGGNVLLLDEPTNDLDVETLRALEEALLEFA---GCAVVISHDRW-FLDRIATHILAFEGDSHVEWFEG 524 (552)
T ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHCC---CeEEEEeCCHH-HHHHhCCEEEEEECCCeEEEeCC
Confidence 999999999999999999999999999999999999999872 38999999975 5667899999998766766 444
Q ss_pred C
Q 000808 914 P 914 (1275)
Q Consensus 914 ~ 914 (1275)
+
T Consensus 525 ~ 525 (552)
T TIGR03719 525 N 525 (552)
T ss_pred C
Confidence 4
No 38
>PRK13409 putative ATPase RIL; Provisional
Probab=100.00 E-value=4.6e-54 Score=527.89 Aligned_cols=198 Identities=23% Similarity=0.251 Sum_probs=166.2
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 756 (1275)
.++++|+++.++ + ..|+++|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++
T Consensus 340 ~l~~~~ls~~~~-------------~-~~l~~~s~~i~~Geiv~l~G~NGsGKSTLlk~L~Gl~~--p~~G~I~~~---- 399 (590)
T PRK13409 340 LVEYPDLTKKLG-------------D-FSLEVEGGEIYEGEVIGIVGPNGIGKTTFAKLLAGVLK--PDEGEVDPE---- 399 (590)
T ss_pred EEEEcceEEEEC-------------C-EEEEecceEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEEe----
Confidence 478889887663 1 25899999999999999999999999999999999865 347999885
Q ss_pred CcccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHH
Q 000808 757 KQETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRK 836 (1275)
Q Consensus 757 ~~~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerq 836 (1275)
..++|++|+..+.+.+||+|++.+.... ... ...++++++.+++.+..++.+ ..|||||||
T Consensus 400 ------~~i~y~~Q~~~~~~~~tv~e~l~~~~~~-----~~~---~~~~~~~L~~l~l~~~~~~~~-----~~LSGGe~Q 460 (590)
T PRK13409 400 ------LKISYKPQYIKPDYDGTVEDLLRSITDD-----LGS---SYYKSEIIKPLQLERLLDKNV-----KDLSGGELQ 460 (590)
T ss_pred ------eeEEEecccccCCCCCcHHHHHHHHhhh-----cCh---HHHHHHHHHHCCCHHHHhCCc-----ccCCHHHHH
Confidence 1479999998888889999999864211 111 124678999999988777776 469999999
Q ss_pred HHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhhhhheeecCcEEEEECCC
Q 000808 837 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVGPL 915 (1275)
Q Consensus 837 rv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 915 (1275)
||+||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++||+. .+...+|++++|+ |++...|..
T Consensus 461 RvaiAraL~~~p~llLLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivsHD~~-~~~~~aDrvivl~--~~~~~~g~~ 537 (590)
T PRK13409 461 RVAIAACLSRDADLYLLDEPSAHLDVEQRLAVAKAIRRIAEEREATALVVDHDIY-MIDYISDRLMVFE--GEPGKHGHA 537 (590)
T ss_pred HHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEc--Ccceeeeec
Confidence 999999999999999999999999999999999999999764 899999999975 4667899999996 377777764
Q ss_pred C
Q 000808 916 G 916 (1275)
Q Consensus 916 ~ 916 (1275)
.
T Consensus 538 ~ 538 (590)
T PRK13409 538 S 538 (590)
T ss_pred C
Confidence 3
No 39
>PRK10636 putative ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.3e-52 Score=520.08 Aligned_cols=197 Identities=22% Similarity=0.357 Sum_probs=160.9
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 756 (1275)
.++++|+++.++ ++.+|+|+|++|++||++||+|||||||||||++|+|..+ +.+|+|.+++.
T Consensus 312 ~l~~~~l~~~y~-------------~~~il~~isl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~--p~~G~i~~~~~-- 374 (638)
T PRK10636 312 LLKMEKVSAGYG-------------DRIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELA--PVSGEIGLAKG-- 374 (638)
T ss_pred eEEEEeeEEEeC-------------CeeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCeEEECCC--
Confidence 588999998773 2469999999999999999999999999999999999865 34799998641
Q ss_pred CcccccceEEEeccCC--CCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCc-cccccccCCCCCCCCHH
Q 000808 757 KQETFTRISGYCEQND--IHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNP-LRQSLVGLPGESGLSTE 833 (1275)
Q Consensus 757 ~~~~~~~~~~~v~q~~--~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~-~~~~~~~~~~~~~lSgG 833 (1275)
..+||++|+. .+.+..|+.+++.- . .. ...++.+.++++.+++.. ..++.+ ..||||
T Consensus 375 ------~~igy~~Q~~~~~l~~~~~~~~~~~~---~--~~----~~~~~~~~~~L~~~~l~~~~~~~~~-----~~LSgG 434 (638)
T PRK10636 375 ------IKLGYFAQHQLEFLRADESPLQHLAR---L--AP----QELEQKLRDYLGGFGFQGDKVTEET-----RRFSGG 434 (638)
T ss_pred ------EEEEEecCcchhhCCccchHHHHHHH---h--Cc----hhhHHHHHHHHHHcCCChhHhcCch-----hhCCHH
Confidence 2589999974 34456677776531 1 11 122345788999999963 556665 469999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcEEE-EE
Q 000808 834 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQEI-YV 912 (1275)
Q Consensus 834 erqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~-~~ 912 (1275)
|||||+||++|+.+|++|||||||+|||+.+...+.+.|+++ . .|||++|||+. .+...+|++++|.+ |+++ |.
T Consensus 435 ekqRl~La~~l~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~--~-gtvi~vSHd~~-~~~~~~d~i~~l~~-G~i~~~~ 509 (638)
T PRK10636 435 EKARLVLALIVWQRPNLLLLDEPTNHLDLDMRQALTEALIDF--E-GALVVVSHDRH-LLRSTTDDLYLVHD-GKVEPFD 509 (638)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHc--C-CeEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEcC
Confidence 999999999999999999999999999999999999999987 3 49999999975 46778999999986 6776 78
Q ss_pred CCC
Q 000808 913 GPL 915 (1275)
Q Consensus 913 g~~ 915 (1275)
|+.
T Consensus 510 g~~ 512 (638)
T PRK10636 510 GDL 512 (638)
T ss_pred CCH
Confidence 876
No 40
>PRK11147 ABC transporter ATPase component; Reviewed
Probab=100.00 E-value=5.5e-52 Score=519.99 Aligned_cols=202 Identities=23% Similarity=0.336 Sum_probs=162.5
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 756 (1275)
.++++|+++.++ ++.+|+|+|++|++|+++||+|||||||||||++|+|..+ +.+|+|.+ |.+
T Consensus 319 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~--p~~G~i~~-~~~- 381 (635)
T PRK11147 319 VFEMENVNYQID-------------GKQLVKDFSAQVQRGDKIALIGPNGCGKTTLLKLMLGQLQ--ADSGRIHC-GTK- 381 (635)
T ss_pred eEEEeeeEEEEC-------------CeEEEcCcEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCCcEEEE-CCC-
Confidence 588999998773 2469999999999999999999999999999999999865 34799988 432
Q ss_pred CcccccceEEEeccCC-CCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCC-ccccccccCCCCCCCCHHH
Q 000808 757 KQETFTRISGYCEQND-IHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELN-PLRQSLVGLPGESGLSTEQ 834 (1275)
Q Consensus 757 ~~~~~~~~~~~v~q~~-~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~~~~lSgGe 834 (1275)
-.+||++|+. .+++.+||.|++.+.... . ... .....+.++++.+++. +..++.+ +.|||||
T Consensus 382 ------~~i~y~~q~~~~l~~~~tv~e~l~~~~~~-~--~~~--~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGe 445 (635)
T PRK11147 382 ------LEVAYFDQHRAELDPEKTVMDNLAEGKQE-V--MVN--GRPRHVLGYLQDFLFHPKRAMTPV-----KALSGGE 445 (635)
T ss_pred ------cEEEEEeCcccccCCCCCHHHHHHhhccc-c--ccc--chHHHHHHHHHhcCCCHHHHhChh-----hhCCHHH
Confidence 1489999975 578889999999865321 1 111 1133577889999985 3456665 4699999
Q ss_pred HHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheee-cCcEEEEEC
Q 000808 835 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMK-RGGQEIYVG 913 (1275)
Q Consensus 835 rqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~-~gg~~~~~g 913 (1275)
||||+||++|+.+|++|||||||+|||+.+...+.+.|+++ +.|||++|||.. .+...+|+++++. +|.-..|.|
T Consensus 446 kqRl~la~al~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vSHd~~-~~~~~~d~i~~l~~~g~i~~~~g 521 (635)
T PRK11147 446 RNRLLLARLFLKPSNLLILDEPTNDLDVETLELLEELLDSY---QGTVLLVSHDRQ-FVDNTVTECWIFEGNGKIGRYVG 521 (635)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhC---CCeEEEEECCHH-HHHHhcCEEEEEeCCCeEEEccC
Confidence 99999999999999999999999999999999999999876 459999999975 5667899999997 544344556
Q ss_pred CC
Q 000808 914 PL 915 (1275)
Q Consensus 914 ~~ 915 (1275)
+-
T Consensus 522 ~y 523 (635)
T PRK11147 522 GY 523 (635)
T ss_pred CH
Confidence 53
No 41
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.5e-50 Score=466.92 Aligned_cols=202 Identities=20% Similarity=0.363 Sum_probs=167.1
Q ss_pred eeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCCcc----cccceEEEeccC---CCCCCC
Q 000808 705 LLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQE----TFTRISGYCEQN---DIHSPF 777 (1275)
Q Consensus 705 iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~~----~~~~~~~~v~q~---~~~~~~ 777 (1275)
.++|+||++++||++||-|-=|||+|-|+++|.|..+ ...|+|.+||++.... ..+.-++|||.| +-++..
T Consensus 274 ~~~dvSf~vr~GEIlGiaGLvGaGRTEl~~~lfG~~~--~~~G~i~l~G~~v~~~sp~~Ai~~Gi~~v~EDRk~~Gl~l~ 351 (500)
T COG1129 274 KVRDVSFTVRAGEILGIAGLVGAGRTELARALFGARP--ASSGEILLDGKPVRIRSPRDAIKAGIAYVPEDRKSEGLVLD 351 (500)
T ss_pred ceeCceeEEeCCcEEEEeccccCCHHHHHHHHhCCCc--CCCceEEECCEEccCCCHHHHHHcCCEeCCcccccCcCcCC
Confidence 5789999999999999999999999999999999654 3479999999986532 234568999976 457888
Q ss_pred CCHHHHHHHHHhccCC-C-CCCHHHHHHHHHHHHHHcCCCccc-cccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEe
Q 000808 778 VTVYESLLYSAWLRLP-P-EVDSETQKMFIEEIMELVELNPLR-QSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMD 854 (1275)
Q Consensus 778 ltv~e~l~~~~~l~~~-~-~~~~~~~~~~~~~~l~~l~l~~~~-~~~~~~~~~~~lSgGerqrv~ia~~l~~~p~illlD 854 (1275)
+++.||+.++...+.. . -.+....++.+++..+.+++.... +..+ ..||||.+|||.|||.|..+|+|||||
T Consensus 352 ~sI~~Ni~l~~l~~~~~~~~i~~~~e~~~~~~~~~~l~Ik~~s~~~~v-----~~LSGGNQQKVvlarwL~~~p~vLilD 426 (500)
T COG1129 352 MSIAENITLASLRRFSRRGLIDRRKERALAERYIRRLRIKTPSPEQPI-----GTLSGGNQQKVVLARWLATDPKVLILD 426 (500)
T ss_pred CcHHHheehHhhhhhccccccChHHHHHHHHHHHHhcCcccCCccchh-----hcCCchhhhhHHHHHHHhcCCCEEEEC
Confidence 9999999887332211 1 234445556788899999886432 3333 579999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcEEEEECCC
Q 000808 855 EPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVGPL 915 (1275)
Q Consensus 855 EPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 915 (1275)
|||.|+|..+..+|.+++++++++|++||++|-+.. |+..++|||++|.+ |+++-.=+.
T Consensus 427 EPTRGIDVGAK~eIy~li~~lA~~G~ail~iSSElp-Ell~~~DRIlVm~~-Gri~~e~~~ 485 (500)
T COG1129 427 EPTRGIDVGAKAEIYRLIRELAAEGKAILMISSELP-ELLGLSDRILVMRE-GRIVGELDR 485 (500)
T ss_pred CCCcCcccchHHHHHHHHHHHHHCCCEEEEEeCChH-HHHhhCCEEEEEEC-CEEEEEecc
Confidence 999999999999999999999999999999999985 89999999999996 787764443
No 42
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=100.00 E-value=2e-49 Score=472.21 Aligned_cols=199 Identities=26% Similarity=0.348 Sum_probs=157.9
Q ss_pred CcEEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCc
Q 000808 675 PHSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGY 754 (1275)
Q Consensus 675 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~ 754 (1275)
+..++++|+++.++ +++.+++++||.|++|+.+||+||||+|||||||+|+|...+ .+|.|.+.-
T Consensus 319 ~~vl~~~~~~~~y~------------~~~~l~~~~s~~i~~g~riaiiG~NG~GKSTLlk~l~g~~~~--~~G~v~~g~- 383 (530)
T COG0488 319 KLVLEFENVSKGYD------------GGRLLLKDLSFRIDRGDRIAIVGPNGAGKSTLLKLLAGELGP--LSGTVKVGE- 383 (530)
T ss_pred CeeEEEeccccccC------------CCceeecCceEEecCCCEEEEECCCCCCHHHHHHHHhhhccc--CCceEEeCC-
Confidence 34689999998874 235799999999999999999999999999999999997653 378887742
Q ss_pred cCCcccccceEEEeccCC-CCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccc-cccccCCCCCCCCH
Q 000808 755 PKKQETFTRISGYCEQND-IHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLR-QSLVGLPGESGLST 832 (1275)
Q Consensus 755 ~~~~~~~~~~~~~v~q~~-~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~-~~~~~~~~~~~lSg 832 (1275)
.-.+||..|+. .+.+..|+.|++.-.. .... +..+...+..+++.... .+.+ +.|||
T Consensus 384 -------~v~igyf~Q~~~~l~~~~t~~d~l~~~~-----~~~~----e~~~r~~L~~f~F~~~~~~~~v-----~~LSG 442 (530)
T COG0488 384 -------TVKIGYFDQHRDELDPDKTVLEELSEGF-----PDGD----EQEVRAYLGRFGFTGEDQEKPV-----GVLSG 442 (530)
T ss_pred -------ceEEEEEEehhhhcCccCcHHHHHHhhC-----cccc----HHHHHHHHHHcCCChHHHhCch-----hhcCH
Confidence 13479999986 3347779999985321 1111 44578889999986533 3444 46999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcEEEEE
Q 000808 833 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYV 912 (1275)
Q Consensus 833 Gerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~ 912 (1275)
|||.|+.+|+.++.+|.+|+|||||+.||..+...+.+.|.+. ..|||++|||.. -+-..+++++++.+ +-..|.
T Consensus 443 GEk~Rl~La~ll~~~pNvLiLDEPTNhLDi~s~~aLe~aL~~f---~Gtvl~VSHDr~-Fl~~va~~i~~~~~-~~~~~~ 517 (530)
T COG0488 443 GEKARLLLAKLLLQPPNLLLLDEPTNHLDIESLEALEEALLDF---EGTVLLVSHDRY-FLDRVATRIWLVED-KVEEFE 517 (530)
T ss_pred hHHHHHHHHHHhccCCCEEEEcCCCccCCHHHHHHHHHHHHhC---CCeEEEEeCCHH-HHHhhcceEEEEcC-ceeEcC
Confidence 9999999999999999999999999999999999999999886 469999999965 46678889998875 333444
Q ss_pred CC
Q 000808 913 GP 914 (1275)
Q Consensus 913 g~ 914 (1275)
|.
T Consensus 518 g~ 519 (530)
T COG0488 518 GG 519 (530)
T ss_pred CC
Confidence 54
No 43
>PLN03073 ABC transporter F family; Provisional
Probab=100.00 E-value=1.2e-49 Score=496.63 Aligned_cols=200 Identities=19% Similarity=0.281 Sum_probs=157.6
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 756 (1275)
.++++|+++.++ +++.+|+|+||+|++||+++|+|||||||||||++|+|..+ +.+|+|.+++
T Consensus 508 ~L~~~~ls~~y~------------~~~~il~~vsl~i~~Ge~i~LvG~NGsGKSTLLk~L~Gll~--p~~G~I~~~~--- 570 (718)
T PLN03073 508 IISFSDASFGYP------------GGPLLFKNLNFGIDLDSRIAMVGPNGIGKSTILKLISGELQ--PSSGTVFRSA--- 570 (718)
T ss_pred eEEEEeeEEEeC------------CCCeeEeccEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCCceEEECC---
Confidence 588999998873 12359999999999999999999999999999999999865 3479998865
Q ss_pred CcccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCc-cccccccCCCCCCCCHHHH
Q 000808 757 KQETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNP-LRQSLVGLPGESGLSTEQR 835 (1275)
Q Consensus 757 ~~~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~-~~~~~~~~~~~~~lSgGer 835 (1275)
+..+||++|+. .+.+++.++.........+ ... ++.++++++.+|+.+ ..+..+ ..||||||
T Consensus 571 -----~~~igyv~Q~~--~~~l~~~~~~~~~~~~~~~-~~~----~~~i~~~L~~~gl~~~~~~~~~-----~~LSgGqk 633 (718)
T PLN03073 571 -----KVRMAVFSQHH--VDGLDLSSNPLLYMMRCFP-GVP----EQKLRAHLGSFGVTGNLALQPM-----YTLSGGQK 633 (718)
T ss_pred -----ceeEEEEeccc--cccCCcchhHHHHHHHhcC-CCC----HHHHHHHHHHCCCChHHhcCCc-----cccCHHHH
Confidence 23589999975 3445666664322111111 111 245778999999974 455554 47999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcEEE-EECC
Q 000808 836 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQEI-YVGP 914 (1275)
Q Consensus 836 qrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~-~~g~ 914 (1275)
|||+||++|+.+|++|+|||||+|||+.+...+.+.|++. + .|||++||++. .+...+|++++|.+ |+++ +.|+
T Consensus 634 qRvaLAraL~~~p~lLLLDEPT~~LD~~s~~~l~~~L~~~--~-gtvIivSHd~~-~i~~~~drv~~l~~-G~i~~~~g~ 708 (718)
T PLN03073 634 SRVAFAKITFKKPHILLLDEPSNHLDLDAVEALIQGLVLF--Q-GGVLMVSHDEH-LISGSVDELWVVSE-GKVTPFHGT 708 (718)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHc--C-CEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEeCCC
Confidence 9999999999999999999999999999999998888765 3 49999999975 46678999999986 6777 7776
Q ss_pred C
Q 000808 915 L 915 (1275)
Q Consensus 915 ~ 915 (1275)
.
T Consensus 709 ~ 709 (718)
T PLN03073 709 F 709 (718)
T ss_pred H
Confidence 4
No 44
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=100.00 E-value=1.3e-46 Score=422.95 Aligned_cols=222 Identities=19% Similarity=0.309 Sum_probs=180.5
Q ss_pred cEEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCcc
Q 000808 676 HSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 755 (1275)
Q Consensus 676 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~ 755 (1275)
..++++|++...+ .....+++|||++++||++||.|-.|-|-+.|+.+|+|..+. .+|+|.++|.+
T Consensus 256 ~vL~V~~L~v~~~------------~~~~~v~~vs~~Vr~GEIvGIAGV~GNGQ~eL~eaisGlr~~--~~G~I~l~G~~ 321 (501)
T COG3845 256 VVLEVEDLSVKDR------------RGVTAVKDVSFEVRAGEIVGIAGVAGNGQSELVEAISGLRKP--ASGRILLNGKD 321 (501)
T ss_pred eEEEEeeeEeecC------------CCCceeeeeeeEEecCcEEEEEecCCCCHHHHHHHHhCCCcc--CCceEEECCEe
Confidence 4688888876532 123589999999999999999999999999999999997653 35999999998
Q ss_pred C-C---c-ccccceEEEeccCCC---CCCCCCHHHHHHHHHhccC----CCCCCHHHHHHHHHHHHHHcCCCcccccccc
Q 000808 756 K-K---Q-ETFTRISGYCEQNDI---HSPFVTVYESLLYSAWLRL----PPEVDSETQKMFIEEIMELVELNPLRQSLVG 823 (1275)
Q Consensus 756 ~-~---~-~~~~~~~~~v~q~~~---~~~~ltv~e~l~~~~~l~~----~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~ 823 (1275)
. . . ...+.-++|||.|.. +.+.+|+.||+.+...-+- ..-.+....++...++++.++.....-..
T Consensus 322 v~~~~~~~~~r~~G~~~VPedR~~~Glv~~~sl~eN~vL~~~~~~~~~~~g~l~~~~i~~~a~~li~~fdVr~~~~~~-- 399 (501)
T COG3845 322 VLGRLSPRERRRLGLAYVPEDRHGHGLVLDLSLAENLVLGRHDKKPFSRGGFLDRRAIRKFARELIEEFDVRAPSPDA-- 399 (501)
T ss_pred ccccCCHHHHHhcCCccCChhhccCccccCccHHHHhhhhhccccccccccccCHHHHHHHHHHHHHHcCccCCCCCc--
Confidence 6 2 1 123346899999863 5688999999976643211 11244566677889999999886332111
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhhee
Q 000808 824 LPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLM 903 (1275)
Q Consensus 824 ~~~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l 903 (1275)
..+.||||++||+-+||+|.++|++|+..+||.|||..+...|.+.|.+.+++|+.|++++-+++ ++++++|+|.+|
T Consensus 400 --~a~~LSGGNqQK~IlaREl~~~p~lLI~~qPTrGLDvgA~~~I~~~l~e~r~~G~AVLLiS~dLD-Eil~lsDrIaVi 476 (501)
T COG3845 400 --PARSLSGGNQQKLILARELARRPDLLIAAQPTRGLDVGAIEFIHERLLELRDAGKAVLLISEDLD-EILELSDRIAVI 476 (501)
T ss_pred --chhhcCCcceehhhhhhhhccCCCEEEEcCCCccccHHHHHHHHHHHHHHHhcCCEEEEEehhHH-HHHHhhheeeee
Confidence 13579999999999999999999999999999999999999999999999999999999999997 799999999999
Q ss_pred ecCcEEEEECCCCc
Q 000808 904 KRGGQEIYVGPLGR 917 (1275)
Q Consensus 904 ~~gg~~~~~g~~~~ 917 (1275)
.+ |+++...++++
T Consensus 477 ~~-Gri~~~~~~~~ 489 (501)
T COG3845 477 YE-GRIVGIVPPEE 489 (501)
T ss_pred eC-Cceeccccccc
Confidence 96 79988888754
No 45
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-45 Score=372.92 Aligned_cols=214 Identities=26% Similarity=0.372 Sum_probs=189.2
Q ss_pred EEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCC
Q 000808 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1275)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 757 (1275)
++++|+++++. +..+|+|||++|++||+++|+|||||||||||++|.+... +.+|+|.++|.+..
T Consensus 3 i~i~~l~K~fg-------------~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~--~~~G~I~i~g~~~~ 67 (240)
T COG1126 3 IEIKNLSKSFG-------------DKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEE--PDSGSITVDGEDVG 67 (240)
T ss_pred EEEEeeeEEeC-------------CeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcC--CCCceEEECCEecc
Confidence 67888887773 4679999999999999999999999999999999999876 45899999997543
Q ss_pred ----cccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHH
Q 000808 758 ----QETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTE 833 (1275)
Q Consensus 758 ----~~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgG 833 (1275)
....|+.+|+|+|+..+||++||.||+..+-..- ...++++.+++..++|+.+||.+.+|.+. .+||||
T Consensus 68 ~~~~~~~~R~~vGmVFQ~fnLFPHlTvleNv~lap~~v--~~~~k~eA~~~A~~lL~~VGL~~ka~~yP-----~qLSGG 140 (240)
T COG1126 68 DKKDILKLRRKVGMVFQQFNLFPHLTVLENVTLAPVKV--KKLSKAEAREKALELLEKVGLADKADAYP-----AQLSGG 140 (240)
T ss_pred chhhHHHHHHhcCeecccccccccchHHHHHHhhhHHH--cCCCHHHHHHHHHHHHHHcCchhhhhhCc-----cccCcH
Confidence 2346788999999999999999999998874321 24567777888999999999999998875 579999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcEEEEEC
Q 000808 834 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVG 913 (1275)
Q Consensus 834 erqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g 913 (1275)
|||||+|||||+.+|+++++|||||+|||+...++.+.+++++++|.|+|++||+... .-+.+||++.|++ |+++..|
T Consensus 141 QqQRVAIARALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~F-Ar~VadrviFmd~-G~iie~g 218 (240)
T COG1126 141 QQQRVAIARALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGF-AREVADRVIFMDQ-GKIIEEG 218 (240)
T ss_pred HHHHHHHHHHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHH-HHHhhheEEEeeC-CEEEEec
Confidence 9999999999999999999999999999999999999999999999999999999763 5578999999995 7999999
Q ss_pred CC
Q 000808 914 PL 915 (1275)
Q Consensus 914 ~~ 915 (1275)
++
T Consensus 219 ~p 220 (240)
T COG1126 219 PP 220 (240)
T ss_pred CH
Confidence 76
No 46
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.4e-43 Score=370.84 Aligned_cols=218 Identities=26% Similarity=0.416 Sum_probs=186.2
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 756 (1275)
.++++|+++.|+ .+ ++|+|||+++++|++++|+||||||||||+|+|.|..+ +.+|+|.++|.+.
T Consensus 4 ~i~v~nl~v~y~------------~~-~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~--p~~G~i~~~g~~~ 68 (254)
T COG1121 4 MIEVENLTVSYG------------NR-PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLK--PSSGEIKIFGKPV 68 (254)
T ss_pred EEEEeeeEEEEC------------CE-eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCc--CCcceEEEccccc
Confidence 589999999985 12 59999999999999999999999999999999999766 3589999999887
Q ss_pred CcccccceEEEeccCCCCC--CCCCHHHHHHHHHhccCC--CCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCH
Q 000808 757 KQETFTRISGYCEQNDIHS--PFVTVYESLLYSAWLRLP--PEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLST 832 (1275)
Q Consensus 757 ~~~~~~~~~~~v~q~~~~~--~~ltv~e~l~~~~~l~~~--~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSg 832 (1275)
....-+..+|||||...+. .-+||+|.+..+...+.+ .... ++.++.++++|+.+|+.+.+|+.+| .|||
T Consensus 69 ~~~~~~~~IgYVPQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~-~~d~~~v~~aL~~Vgm~~~~~r~i~-----~LSG 142 (254)
T COG1121 69 RKRRKRLRIGYVPQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLN-KKDKEKVDEALERVGMEDLRDRQIG-----ELSG 142 (254)
T ss_pred cccccCCeEEEcCcccccCCCCCcCHHHHHHccCccccccccccc-HHHHHHHHHHHHHcCchhhhCCccc-----ccCc
Confidence 6544456899999964322 237999999876432221 1122 3336789999999999999999986 5999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcEEEEE
Q 000808 833 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYV 912 (1275)
Q Consensus 833 Gerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~ 912 (1275)
||+|||.|||||+++|++|+|||||+|+|+.++..+.++|++++++|+||++++||++ .+.++||+++.|+ +++++.
T Consensus 143 GQ~QRV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~-~v~~~~D~vi~Ln--~~~~~~ 219 (254)
T COG1121 143 GQKQRVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLG-LVMAYFDRVICLN--RHLIAS 219 (254)
T ss_pred HHHHHHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcH-HhHhhCCEEEEEc--CeeEec
Confidence 9999999999999999999999999999999999999999999988999999999997 5889999999997 479999
Q ss_pred CCCCcc
Q 000808 913 GPLGRH 918 (1275)
Q Consensus 913 g~~~~~ 918 (1275)
|++++.
T Consensus 220 G~~~~~ 225 (254)
T COG1121 220 GPPEEV 225 (254)
T ss_pred cChhhc
Confidence 999653
No 47
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.8e-43 Score=372.07 Aligned_cols=218 Identities=23% Similarity=0.331 Sum_probs=191.4
Q ss_pred EEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCC
Q 000808 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1275)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 757 (1275)
++++++++.+... ..+...+|+|||++|++||++||+|+||||||||++++.+... +.+|+|.+||.++.
T Consensus 2 I~l~~vsK~~~~~--------~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~--PtsG~v~v~G~di~ 71 (339)
T COG1135 2 IELENVSKTFGQT--------GTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLER--PTSGSVFVDGQDLT 71 (339)
T ss_pred eEEEeeeeeeccC--------CCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCC--CCCceEEEcCEecc
Confidence 5788888766421 1123569999999999999999999999999999999999876 45899999997754
Q ss_pred c------ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCC
Q 000808 758 Q------ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLS 831 (1275)
Q Consensus 758 ~------~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lS 831 (1275)
. ...|+.+|+++|+..++...||+||+.|...+. ..++++.++++.++++.+||.+.++.+. .+||
T Consensus 72 ~l~~~~Lr~~R~~IGMIFQhFnLLssrTV~~NvA~PLeia---g~~k~ei~~RV~elLelVgL~dk~~~yP-----~qLS 143 (339)
T COG1135 72 ALSEAELRQLRQKIGMIFQHFNLLSSRTVFENVAFPLELA---GVPKAEIKQRVAELLELVGLSDKADRYP-----AQLS 143 (339)
T ss_pred cCChHHHHHHHhhccEEeccccccccchHHhhhhhhHhhc---CCCHHHHHHHHHHHHHHcCChhhhccCc-----hhcC
Confidence 2 245788999999999999999999999988765 3568889999999999999999888875 5799
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhhhhheeecCcEEE
Q 000808 832 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDELFLMKRGGQEI 910 (1275)
Q Consensus 832 gGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~ 910 (1275)
|||||||+|||||+.+|+||++|||||+|||++...|.+.|+++.++ |.||+++||+++ -+-+.|||+.+|++ |+++
T Consensus 144 GGQKQRVaIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~-Vvk~ic~rVavm~~-G~lv 221 (339)
T COG1135 144 GGQKQRVAIARALANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEME-VVKRICDRVAVLDQ-GRLV 221 (339)
T ss_pred cchhhHHHHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHH-HHHHHhhhheEeeC-CEEE
Confidence 99999999999999999999999999999999999999999999765 999999999975 36678999999996 8999
Q ss_pred EECCC
Q 000808 911 YVGPL 915 (1275)
Q Consensus 911 ~~g~~ 915 (1275)
..|+.
T Consensus 222 E~G~v 226 (339)
T COG1135 222 EEGTV 226 (339)
T ss_pred EeccH
Confidence 99986
No 48
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=5.1e-43 Score=359.39 Aligned_cols=230 Identities=27% Similarity=0.374 Sum_probs=198.0
Q ss_pred cEEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCcc
Q 000808 676 HSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 755 (1275)
Q Consensus 676 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~ 755 (1275)
..++++++++++ +.+.|++|||++|++||+++||||||+|||||||+|.|..++ .+|+|.++|.+
T Consensus 7 ~~I~vr~v~~~f-------------G~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P--~~GeI~i~G~~ 71 (263)
T COG1127 7 PLIEVRGVTKSF-------------GDRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRP--DKGEILIDGED 71 (263)
T ss_pred ceEEEeeeeeec-------------CCEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCC--CCCeEEEcCcc
Confidence 468999998776 456799999999999999999999999999999999998774 48999999998
Q ss_pred CCc------ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCcc-ccccccCCCCC
Q 000808 756 KKQ------ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPL-RQSLVGLPGES 828 (1275)
Q Consensus 756 ~~~------~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~-~~~~~~~~~~~ 828 (1275)
+.. ...+++.|+++|+..+|..+||+||+.|..+ .....+++..++.+..-++.+||... .+.. +.
T Consensus 72 i~~ls~~~~~~ir~r~GvlFQ~gALFssltV~eNVafplr--e~~~lp~~~i~~lv~~KL~~VGL~~~~~~~~-----Ps 144 (263)
T COG1127 72 IPQLSEEELYEIRKRMGVLFQQGALFSSLTVFENVAFPLR--EHTKLPESLIRELVLMKLELVGLRGAAADLY-----PS 144 (263)
T ss_pred hhccCHHHHHHHHhheeEEeeccccccccchhHhhheehH--hhccCCHHHHHHHHHHHHHhcCCChhhhhhC-----ch
Confidence 643 1346779999999999999999999988653 23345667777888888999999877 5554 46
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhhhhheeecCc
Q 000808 829 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDELFLMKRGG 907 (1275)
Q Consensus 829 ~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg 907 (1275)
+||||+|||+++|||++.+|+++|+||||+||||.++..+.++++++.++ |.|++++|||.+ +++..+|++++|.+ |
T Consensus 145 ELSGGM~KRvaLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~-s~~~i~Drv~~L~~-g 222 (263)
T COG1127 145 ELSGGMRKRVALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLD-SLLTIADRVAVLAD-G 222 (263)
T ss_pred hhcchHHHHHHHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChH-HHHhhhceEEEEeC-C
Confidence 89999999999999999999999999999999999999999999999876 999999999987 68999999999996 7
Q ss_pred EEEEECCCCccc----hHHHHHHhcC
Q 000808 908 QEIYVGPLGRHS----CHLIRYFEGI 929 (1275)
Q Consensus 908 ~~~~~g~~~~~~----~~~~~~f~~~ 929 (1275)
+++..|++++.. ..+.+||...
T Consensus 223 kv~~~Gt~~el~~sd~P~v~qf~~G~ 248 (263)
T COG1127 223 KVIAEGTPEELLASDDPWVRQFFNGI 248 (263)
T ss_pred EEEEeCCHHHHHhCCCHHHHHHhcCC
Confidence 999999985422 2366777654
No 49
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=3.3e-43 Score=361.22 Aligned_cols=214 Identities=26% Similarity=0.367 Sum_probs=191.9
Q ss_pred EEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCC
Q 000808 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1275)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 757 (1275)
++|+|+++.+. ++.+++|+|++|++||+++++|||||||||+||+|.+... +.+|+|.+||.++.
T Consensus 2 I~~~nvsk~y~-------------~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLie--pt~G~I~i~g~~i~ 66 (309)
T COG1125 2 IEFENVSKRYG-------------NKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIE--PTSGEILIDGEDIS 66 (309)
T ss_pred ceeeeeehhcC-------------CceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccC--CCCceEEECCeecc
Confidence 57888887763 4579999999999999999999999999999999999877 45899999999875
Q ss_pred c---ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCc--cccccccCCCCCCCCH
Q 000808 758 Q---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNP--LRQSLVGLPGESGLST 832 (1275)
Q Consensus 758 ~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~--~~~~~~~~~~~~~lSg 832 (1275)
. ..+|+.+|||-|.-.+||++||.||+.+.-.+. ..++++.+++++|+++.+||.+ +++++. .+|||
T Consensus 67 ~~d~~~LRr~IGYviQqigLFPh~Tv~eNIa~VP~L~---~w~k~~i~~r~~ELl~lvgL~p~~~~~RyP-----~eLSG 138 (309)
T COG1125 67 DLDPVELRRKIGYVIQQIGLFPHLTVAENIATVPKLL---GWDKERIKKRADELLDLVGLDPSEYADRYP-----HELSG 138 (309)
T ss_pred cCCHHHHHHhhhhhhhhcccCCCccHHHHHHhhhhhc---CCCHHHHHHHHHHHHHHhCCCHHHHhhcCc-----hhcCc
Confidence 4 357889999999999999999999998776554 5678888999999999999975 666663 68999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhhhhheeecCcEEEE
Q 000808 833 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDELFLMKRGGQEIY 911 (1275)
Q Consensus 833 Gerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~ 911 (1275)
||+|||.+||||+.+|+|+++|||+++|||-++..+++.++++.++ |+|||++|||.+ +.+.+.||+++|++ |+++.
T Consensus 139 GQQQRVGv~RALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDid-EA~kLadri~vm~~-G~i~Q 216 (309)
T COG1125 139 GQQQRVGVARALAADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDID-EALKLADRIAVMDA-GEIVQ 216 (309)
T ss_pred chhhHHHHHHHHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHH-HHHhhhceEEEecC-CeEEE
Confidence 9999999999999999999999999999999999999999998765 999999999987 78899999999995 89999
Q ss_pred ECCCC
Q 000808 912 VGPLG 916 (1275)
Q Consensus 912 ~g~~~ 916 (1275)
+++++
T Consensus 217 ~~~P~ 221 (309)
T COG1125 217 YDTPD 221 (309)
T ss_pred eCCHH
Confidence 99874
No 50
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.4e-43 Score=356.48 Aligned_cols=225 Identities=25% Similarity=0.320 Sum_probs=190.6
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 756 (1275)
.++++|++..|+ +++++|+|||++|++||+++|+|||||||||||++|.|..+ +.+|+|.+||.++
T Consensus 3 ~i~~~nl~k~yp------------~~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d--~t~G~i~~~g~~i 68 (258)
T COG3638 3 MIEVKNLSKTYP------------GGHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVD--PTSGEILFNGVQI 68 (258)
T ss_pred eEEEeeeeeecC------------CCceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccC--CCcceEEecccch
Confidence 478999987773 45679999999999999999999999999999999999766 4589999999765
Q ss_pred Cc------ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCC-----CCCCHHHHHHHHHHHHHHcCCCccccccccCC
Q 000808 757 KQ------ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLP-----PEVDSETQKMFIEEIMELVELNPLRQSLVGLP 825 (1275)
Q Consensus 757 ~~------~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~-----~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~ 825 (1275)
.. ..+++.+|+++|++.+.+.++|.+|+..+..-+.+ .....++.+..+-+.|+.+|+.+.+-+..+
T Consensus 69 ~~~~~k~lr~~r~~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~~A~qra~-- 146 (258)
T COG3638 69 TKLKGKELRKLRRDIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILDKAYQRAS-- 146 (258)
T ss_pred hccchHHHHHHHHhceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHHHHHHHhc--
Confidence 32 24577899999999999999999999876322211 122334455667889999999998887764
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhh-CCCEEEEEecCCCHHHHHhhhhhheee
Q 000808 826 GESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFESFDELFLMK 904 (1275)
Q Consensus 826 ~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~~~~l~ 904 (1275)
.|||||+|||+|||||+.+|+|++.|||+++|||.+++.+|+.|+++.+ +|.|||++.||.+. ..++|||++-|+
T Consensus 147 ---~LSGGQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdl-A~~Y~~Riigl~ 222 (258)
T COG3638 147 ---TLSGGQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDL-AKKYADRIIGLK 222 (258)
T ss_pred ---cCCcchhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHH-HHHHHhhheEec
Confidence 6999999999999999999999999999999999999999999999975 49999999999864 568999999999
Q ss_pred cCcEEEEECCCCccchHH
Q 000808 905 RGGQEIYVGPLGRHSCHL 922 (1275)
Q Consensus 905 ~gg~~~~~g~~~~~~~~~ 922 (1275)
+ |+++|+||+++..++.
T Consensus 223 ~-G~ivfDg~~~el~~~~ 239 (258)
T COG3638 223 A-GRIVFDGPASELTDEA 239 (258)
T ss_pred C-CcEEEeCChhhhhHHH
Confidence 6 8999999997654443
No 51
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=1.7e-42 Score=390.53 Aligned_cols=215 Identities=31% Similarity=0.444 Sum_probs=190.2
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 756 (1275)
.++++|++..+. .++.+|+||||+|++||++||+||||||||||+|+|+|...+ .+|+|.++|.+.
T Consensus 4 ~i~~~~l~k~~~------------~~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p--~~G~i~i~G~~~ 69 (293)
T COG1131 4 VIEVRNLTKKYG------------GDKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKP--TSGEILVLGYDV 69 (293)
T ss_pred eeeecceEEEeC------------CCCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCC--CceEEEEcCEeC
Confidence 366788887763 136799999999999999999999999999999999998764 589999999886
Q ss_pred Cc--ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHH
Q 000808 757 KQ--ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQ 834 (1275)
Q Consensus 757 ~~--~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGe 834 (1275)
.. ...++.+||++|++.+++.+||+|+|.|.+.++.+.. +..+++++++++.+||.+.+++.+ ++||+||
T Consensus 70 ~~~~~~~~~~igy~~~~~~~~~~lT~~e~l~~~~~l~~~~~---~~~~~~~~~~l~~~~L~~~~~~~~-----~~lS~G~ 141 (293)
T COG1131 70 VKEPAKVRRRIGYVPQEPSLYPELTVRENLEFFARLYGLSK---EEAEERIEELLELFGLEDKANKKV-----RTLSGGM 141 (293)
T ss_pred ccCHHHHHhheEEEccCCCCCccccHHHHHHHHHHHhCCCh---hHHHHHHHHHHHHcCCchhhCcch-----hhcCHHH
Confidence 54 3567789999999999999999999999999886432 445668999999999998665555 5799999
Q ss_pred HHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCC-CEEEEEecCCCHHHHHhhhhhheeecCcEEEEEC
Q 000808 835 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTG-RTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVG 913 (1275)
Q Consensus 835 rqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g-~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g 913 (1275)
|||++||+||+++|++|||||||+||||.++..+++.|++++++| +||+++||+++ ++...||++++|++ |++++.|
T Consensus 142 kqrl~ia~aL~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~-e~~~~~d~v~il~~-G~~~~~g 219 (293)
T COG1131 142 KQRLSIALALLHDPELLILDEPTSGLDPESRREIWELLRELAKEGGVTILLSTHILE-EAEELCDRVIILND-GKIIAEG 219 (293)
T ss_pred HHHHHHHHHHhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHH-HHHHhCCEEEEEeC-CEEEEeC
Confidence 999999999999999999999999999999999999999999887 89999999986 68888999999996 7999999
Q ss_pred CC
Q 000808 914 PL 915 (1275)
Q Consensus 914 ~~ 915 (1275)
++
T Consensus 220 ~~ 221 (293)
T COG1131 220 TP 221 (293)
T ss_pred CH
Confidence 76
No 52
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.5e-42 Score=363.02 Aligned_cols=204 Identities=25% Similarity=0.372 Sum_probs=180.8
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 756 (1275)
.+.++++++++. ...+|+|||++|++||+++|+||||||||||||+|+|..+ +.+|+|.++|.+.
T Consensus 3 ~l~i~~v~~~f~-------------~~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~--p~~G~V~~~g~~v 67 (248)
T COG1116 3 LLEIEGVSKSFG-------------GVEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEK--PTSGEVLLDGRPV 67 (248)
T ss_pred eEEEEeeEEEeC-------------ceEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCccc
Confidence 477888888774 2569999999999999999999999999999999999877 3589999999887
Q ss_pred CcccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHH
Q 000808 757 KQETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRK 836 (1275)
Q Consensus 757 ~~~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerq 836 (1275)
.. ....++||+|++.++|.+||+||+.++...+. .++++++++++++++.+||.+..|... .+|||||||
T Consensus 68 ~~--p~~~~~~vFQ~~~LlPW~Tv~~NV~l~l~~~~---~~~~e~~~~a~~~L~~VgL~~~~~~~P-----~qLSGGMrQ 137 (248)
T COG1116 68 TG--PGPDIGYVFQEDALLPWLTVLDNVALGLELRG---KSKAEARERAKELLELVGLAGFEDKYP-----HQLSGGMRQ 137 (248)
T ss_pred CC--CCCCEEEEeccCcccchhhHHhhheehhhccc---cchHhHHHHHHHHHHHcCCcchhhcCc-----cccChHHHH
Confidence 32 34568999999999999999999999877653 345666778999999999999998875 579999999
Q ss_pred HHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhh-CCCEEEEEecCCCHHHHHhhhhhheeecC
Q 000808 837 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFESFDELFLMKRG 906 (1275)
Q Consensus 837 rv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~~~~l~~g 906 (1275)
||+|||||+.+|+||+||||+++||+.++..+++.|.++.+ .++||+++|||.+ |...+.|||++|.++
T Consensus 138 RVaiARAL~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~-EAv~LsdRivvl~~~ 207 (248)
T COG1116 138 RVAIARALATRPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVD-EAVYLADRVVVLSNR 207 (248)
T ss_pred HHHHHHHHhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHH-HHHhhhCEEEEecCC
Confidence 99999999999999999999999999999999999999765 4899999999997 677899999999863
No 53
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=1.1e-42 Score=372.74 Aligned_cols=219 Identities=27% Similarity=0.397 Sum_probs=189.2
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 756 (1275)
.++.+|++++|+ ++.+|+|+||++++||+++|+||||||||||||+|+|..+ +.+|+|.++|+++
T Consensus 2 ~L~~~~ls~~y~-------------~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~--p~~G~V~l~g~~i 66 (258)
T COG1120 2 MLEVENLSFGYG-------------GKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLK--PKSGEVLLDGKDI 66 (258)
T ss_pred eeEEEEEEEEEC-------------CeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCC--CCCCEEEECCCch
Confidence 378899999884 4579999999999999999999999999999999999766 3489999999987
Q ss_pred Cc---ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCC-CCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCH
Q 000808 757 KQ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPP-EVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLST 832 (1275)
Q Consensus 757 ~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~-~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSg 832 (1275)
.. ..+.+.++||||.....+.+||+|.+.++..-.... ....++.++.++++++.+|+.+.+++.+. .|||
T Consensus 67 ~~~~~kelAk~ia~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la~r~~~-----~LSG 141 (258)
T COG1120 67 ASLSPKELAKKLAYVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLADRPVD-----ELSG 141 (258)
T ss_pred hhcCHHHHhhhEEEeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHhcCccc-----ccCh
Confidence 54 345678999999998888999999998874321111 11233444578999999999999999874 6999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhh-CCCEEEEEecCCCHHHHHhhhhhheeecCcEEEE
Q 000808 833 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFESFDELFLMKRGGQEIY 911 (1275)
Q Consensus 833 Gerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~ 911 (1275)
||||||.|||||+++|+||+||||||.||...+.+++++++++.+ +|+|||+++||++. ...++|++++|++ |+++.
T Consensus 142 GerQrv~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~-A~ryad~~i~lk~-G~i~a 219 (258)
T COG1120 142 GERQRVLIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNL-AARYADHLILLKD-GKIVA 219 (258)
T ss_pred hHHHHHHHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHH-HHHhCCEEEEEEC-CeEEe
Confidence 999999999999999999999999999999999999999999985 59999999999984 6789999999996 79999
Q ss_pred ECCCCc
Q 000808 912 VGPLGR 917 (1275)
Q Consensus 912 ~g~~~~ 917 (1275)
.|++.+
T Consensus 220 ~G~p~e 225 (258)
T COG1120 220 QGTPEE 225 (258)
T ss_pred ecCcch
Confidence 999854
No 54
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=8.8e-42 Score=358.57 Aligned_cols=208 Identities=28% Similarity=0.417 Sum_probs=175.3
Q ss_pred EEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCC
Q 000808 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1275)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 757 (1275)
++++|++..+... .....+|++||++|++||+++|+|||||||||||++|.|...+ .+|.|.++|.+..
T Consensus 2 i~~~~v~k~y~~~---------~~~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~p--t~G~v~i~g~d~~ 70 (226)
T COG1136 2 IELKNVSKIYGLG---------GEKVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKP--TSGEVLINGKDLT 70 (226)
T ss_pred cEEeeeEEEeccC---------CcceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCC--CCceEEECCEEcC
Confidence 3467777666422 1125799999999999999999999999999999999998764 5899999997754
Q ss_pred c-------ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCcccc-ccccCCCCCC
Q 000808 758 Q-------ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQ-SLVGLPGESG 829 (1275)
Q Consensus 758 ~-------~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~-~~~~~~~~~~ 829 (1275)
. ..+++.+|||+|+..+.|++||+||+.....+... .....+++++++++.+||.+..+ ..+ .+
T Consensus 71 ~l~~~~~~~~R~~~iGfvFQ~~nLl~~ltv~ENv~lpl~~~~~---~~~~~~~~~~~l~~~lgl~~~~~~~~p-----~e 142 (226)
T COG1136 71 KLSEKELAKLRRKKIGFVFQNFNLLPDLTVLENVELPLLIAGK---SAGRRKRAAEELLEVLGLEDRLLKKKP-----SE 142 (226)
T ss_pred cCCHHHHHHHHHHhEEEECccCCCCCCCCHHHHHHhHHHHcCC---ChhHHHHHHHHHHHhcCChhhhccCCc-----hh
Confidence 2 12345799999999999999999999987655432 22255677889999999986665 544 57
Q ss_pred CCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhhhhheeecC
Q 000808 830 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDELFLMKRG 906 (1275)
Q Consensus 830 lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~g 906 (1275)
|||||||||+|||||+.+|++++.||||.+||+.++..|+++++++.++ |+|||++|||+ ++...+||++.|.+|
T Consensus 143 LSGGqqQRVAIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~--~lA~~~dr~i~l~dG 218 (226)
T COG1136 143 LSGGQQQRVAIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDP--ELAKYADRVIELKDG 218 (226)
T ss_pred cCHHHHHHHHHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCH--HHHHhCCEEEEEeCC
Confidence 9999999999999999999999999999999999999999999999865 89999999996 578899999999974
No 55
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.3e-42 Score=342.89 Aligned_cols=201 Identities=28% Similarity=0.383 Sum_probs=184.1
Q ss_pred ceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCCc--ccccceEEEeccCCCCCCCCCHH
Q 000808 704 MLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ--ETFTRISGYCEQNDIHSPFVTVY 781 (1275)
Q Consensus 704 ~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~--~~~~~~~~~v~q~~~~~~~ltv~ 781 (1275)
++++||||+++.||++||+|||||||||+|++|++...+ .+|.|.+||.+..+ ...++.+|.++.+..++..||++
T Consensus 16 ~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P--~~G~v~idg~d~~~~p~~vrr~IGVl~~e~glY~RlT~r 93 (245)
T COG4555 16 QAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIP--DSGKVTIDGVDTVRDPSFVRRKIGVLFGERGLYARLTAR 93 (245)
T ss_pred hhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccC--CCceEEEeecccccChHHHhhhcceecCCcChhhhhhHH
Confidence 489999999999999999999999999999999998763 48999999998643 45678899999888899999999
Q ss_pred HHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCC
Q 000808 782 ESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 861 (1275)
Q Consensus 782 e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD 861 (1275)
|||.|.+.+. +....+.+.+++++.+.++|.++.|+.+| ++|.|+||||+|||||+++|+++++||||||||
T Consensus 94 Enl~~Fa~L~---~l~~~~~kari~~l~k~l~l~~~~~rRv~-----~~S~G~kqkV~iARAlvh~P~i~vlDEP~sGLD 165 (245)
T COG4555 94 ENLKYFARLN---GLSRKEIKARIAELSKRLQLLEYLDRRVG-----EFSTGMKQKVAIARALVHDPSILVLDEPTSGLD 165 (245)
T ss_pred HHHHHHHHHh---hhhhhHHHHHHHHHHHHhChHHHHHHHHh-----hhchhhHHHHHHHHHHhcCCCeEEEcCCCCCcc
Confidence 9999999876 45566778889999999999999999986 699999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcEEEEECCCC
Q 000808 862 ARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVGPLG 916 (1275)
Q Consensus 862 ~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~~ 916 (1275)
..+.+.+.+.++++.++|++||++||..+ ++.++||+++++++ |++++.|++.
T Consensus 166 i~~~r~~~dfi~q~k~egr~viFSSH~m~-EvealCDrvivlh~-Gevv~~gs~~ 218 (245)
T COG4555 166 IRTRRKFHDFIKQLKNEGRAVIFSSHIMQ-EVEALCDRVIVLHK-GEVVLEGSIE 218 (245)
T ss_pred HHHHHHHHHHHHHhhcCCcEEEEecccHH-HHHHhhheEEEEec-CcEEEcCCHH
Confidence 99999999999999888999999999985 78889999999997 7999999874
No 56
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=1.5e-36 Score=402.79 Aligned_cols=218 Identities=22% Similarity=0.339 Sum_probs=188.2
Q ss_pred CcEEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCc
Q 000808 675 PHSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGY 754 (1275)
Q Consensus 675 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~ 754 (1275)
...++++|+++.++. +++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.
T Consensus 926 ~~~L~I~nLsK~y~~-----------~~k~aL~~lsl~I~~Gei~aLLG~NGAGKSTLLkiLaGLl~--PtsG~I~i~G~ 992 (2272)
T TIGR01257 926 VPGVCVKNLVKIFEP-----------SGRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLP--PTSGTVLVGGK 992 (2272)
T ss_pred CceEEEEeEEEEecC-----------CCceEEEeeEEEEcCCcEEEEECCCCChHHHHHHHHhcCCC--CCceEEEECCE
Confidence 347999999988731 23569999999999999999999999999999999999876 34899999998
Q ss_pred cCCc--ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCH
Q 000808 755 PKKQ--ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLST 832 (1275)
Q Consensus 755 ~~~~--~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSg 832 (1275)
++.. ...++.+|||+|++.+++.+||+|++.|.++++. ...++.+++++++++.+||.+..++.+ +.|||
T Consensus 993 dI~~~~~~~r~~IG~~pQ~~~L~~~LTV~E~L~f~~~lkg---~~~~~~~~~v~~lL~~vgL~~~~~~~~-----~~LSG 1064 (2272)
T TIGR01257 993 DIETNLDAVRQSLGMCPQHNILFHHLTVAEHILFYAQLKG---RSWEEAQLEMEAMLEDTGLHHKRNEEA-----QDLSG 1064 (2272)
T ss_pred ECcchHHHHhhcEEEEecCCcCCCCCCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCH
Confidence 8643 2345679999999999999999999999876652 223444567899999999998888776 46999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcEEEEE
Q 000808 833 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYV 912 (1275)
Q Consensus 833 Gerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~ 912 (1275)
||||||+||+||+.+|+|++|||||+|||+.+++.+++.|++++ +|+|||++||+++ ++..++||+++|++ |+++..
T Consensus 1065 GqKQRLsLArALi~~PkVLLLDEPTSGLDp~sr~~l~~lL~~l~-~g~TIIltTHdmd-ea~~laDrI~iL~~-GkL~~~ 1141 (2272)
T TIGR01257 1065 GMQRKLSVAIAFVGDAKVVVLDEPTSGVDPYSRRSIWDLLLKYR-SGRTIIMSTHHMD-EADLLGDRIAIISQ-GRLYCS 1141 (2272)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHh-CCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEe
Confidence 99999999999999999999999999999999999999999985 5999999999985 56678999999996 799999
Q ss_pred CCCC
Q 000808 913 GPLG 916 (1275)
Q Consensus 913 g~~~ 916 (1275)
|++.
T Consensus 1142 Gs~~ 1145 (2272)
T TIGR01257 1142 GTPL 1145 (2272)
T ss_pred cCHH
Confidence 9873
No 57
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=3.3e-41 Score=332.11 Aligned_cols=213 Identities=25% Similarity=0.349 Sum_probs=183.3
Q ss_pred EEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCC
Q 000808 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1275)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 757 (1275)
+.|+||+..|. +.+++|+||||+|++||++-|+||||||||||||+|.+... +..|+|.++|+++.
T Consensus 2 I~f~~V~k~Y~------------~g~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~--pt~G~i~~~~~dl~ 67 (223)
T COG2884 2 IRFENVSKAYP------------GGREALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEER--PTRGKILVNGHDLS 67 (223)
T ss_pred eeehhhhhhcC------------CCchhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhc--CCCceEEECCeecc
Confidence 56888877664 33579999999999999999999999999999999999765 35899999999864
Q ss_pred c------ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCC
Q 000808 758 Q------ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLS 831 (1275)
Q Consensus 758 ~------~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lS 831 (1275)
. ..+||++|+|+||..+.++.||+||+.|..... .....+.++++.++|+.+||.+.++... .+||
T Consensus 68 ~l~~~~iP~LRR~IGvVFQD~rLL~~~tvyeNVA~pL~v~---G~~~~~i~~rV~~~L~~VgL~~k~~~lP-----~~LS 139 (223)
T COG2884 68 RLKGREIPFLRRQIGVVFQDFRLLPDRTVYENVALPLRVI---GKPPREIRRRVSEVLDLVGLKHKARALP-----SQLS 139 (223)
T ss_pred cccccccchhhheeeeEeeeccccccchHhhhhhhhhhcc---CCCHHHHHHHHHHHHHHhccchhhhcCc-----cccC
Confidence 3 135788999999999999999999999987665 3456677889999999999999887764 5799
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhh-hhhheeecCcEEE
Q 000808 832 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESF-DELFLMKRGGQEI 910 (1275)
Q Consensus 832 gGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~-d~~~~l~~gg~~~ 910 (1275)
|||+|||+||||++.+|++|+.||||.+|||..+..|++++.++.+.|.||++.|||. ++.+.. .+++.|.+ |+++
T Consensus 140 GGEQQRvaIARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~--~lv~~~~~rvl~l~~-Grl~ 216 (223)
T COG2884 140 GGEQQRVAIARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDL--ELVNRMRHRVLALED-GRLV 216 (223)
T ss_pred chHHHHHHHHHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccH--HHHHhccCcEEEEeC-CEEE
Confidence 9999999999999999999999999999999999999999999998899999999985 455544 56677765 7888
Q ss_pred EECCC
Q 000808 911 YVGPL 915 (1275)
Q Consensus 911 ~~g~~ 915 (1275)
.....
T Consensus 217 ~d~~~ 221 (223)
T COG2884 217 RDESR 221 (223)
T ss_pred ecccc
Confidence 76543
No 58
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.1e-41 Score=375.55 Aligned_cols=215 Identities=27% Similarity=0.396 Sum_probs=193.8
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 756 (1275)
.++++|++..+. +..+|+|+|++|++||+++|+||||||||||||+|+|..+ +.+|+|.|+|.+.
T Consensus 3 ~i~l~~v~K~yg-------------~~~~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~--~~~G~I~i~g~~v 67 (338)
T COG3839 3 ELELKNVRKSFG-------------SFEVLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEE--PTSGEILIDGRDV 67 (338)
T ss_pred EEEEeeeEEEcC-------------CceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEC
Confidence 578899988773 1129999999999999999999999999999999999876 4589999999987
Q ss_pred Cc-ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHH
Q 000808 757 KQ-ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQR 835 (1275)
Q Consensus 757 ~~-~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGer 835 (1275)
+. ...+|.+++|+|+..+||+|||+||+.|+.+++ ..++++.+++|+++.+.|+|.+..|++. ++||||||
T Consensus 68 t~l~P~~R~iamVFQ~yALyPhmtV~~Niaf~Lk~~---~~~k~ei~~rV~eva~~L~l~~lL~r~P-----~~LSGGQr 139 (338)
T COG3839 68 TDLPPEKRGIAMVFQNYALYPHMTVYENIAFGLKLR---GVPKAEIDKRVKEVAKLLGLEHLLNRKP-----LQLSGGQR 139 (338)
T ss_pred CCCChhHCCEEEEeCCccccCCCcHHHHhhhhhhhC---CCchHHHHHHHHHHHHHcCChhHHhcCc-----ccCChhhH
Confidence 65 345688999999999999999999999998776 3467788899999999999999999885 57999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhhhhheeecCcEEEEECC
Q 000808 836 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVGP 914 (1275)
Q Consensus 836 qrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~ 914 (1275)
|||+|||||+++|++++||||.|+||+..+..+...|+++.++ |.|+|.+|||.. +...++||+.+|. +|++...|+
T Consensus 140 QRVAlaRAlVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~-EAmtladri~Vm~-~G~i~Q~g~ 217 (338)
T COG3839 140 QRVALARALVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQV-EAMTLADRIVVMN-DGRIQQVGT 217 (338)
T ss_pred HHHHHHHHHhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHH-HHHhhCCEEEEEe-CCeeeecCC
Confidence 9999999999999999999999999999999999999998765 899999999974 7889999999999 489999998
Q ss_pred CC
Q 000808 915 LG 916 (1275)
Q Consensus 915 ~~ 916 (1275)
+.
T Consensus 218 p~ 219 (338)
T COG3839 218 PL 219 (338)
T ss_pred hH
Confidence 84
No 59
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.1e-41 Score=358.38 Aligned_cols=207 Identities=29% Similarity=0.445 Sum_probs=185.9
Q ss_pred cccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCc---cCCc-ccccceEEEeccCCCCCC
Q 000808 701 DKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGY---PKKQ-ETFTRISGYCEQNDIHSP 776 (1275)
Q Consensus 701 ~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~---~~~~-~~~~~~~~~v~q~~~~~~ 776 (1275)
+...+++|||+.|+.||++|++|||||||||||++|+|...+ ..|.|.+||. +... ....|.+|||+|+..+|+
T Consensus 13 ~~~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p--~~G~I~~~~~~l~D~~~~~~~~R~VGfvFQ~YALF~ 90 (345)
T COG1118 13 GAFGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETP--DAGRIRLNGRVLFDVSNLAVRDRKVGFVFQHYALFP 90 (345)
T ss_pred ccccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCC--CCceEEECCEeccchhccchhhcceeEEEechhhcc
Confidence 345699999999999999999999999999999999998763 4899999998 5544 334578999999999999
Q ss_pred CCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCC
Q 000808 777 FVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEP 856 (1275)
Q Consensus 777 ~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~~l~~~p~illlDEP 856 (1275)
+|||.||+.|+.+.+ ....++.+.+.+++++|+.+.|++..+.+. .+|||||||||++||||+.+|++|+||||
T Consensus 91 HmtVa~NIAFGl~~~-~~~p~~~~~r~rv~elL~lvqL~~la~ryP-----~QLSGGQrQRVALARALA~eP~vLLLDEP 164 (345)
T COG1118 91 HMTVADNIAFGLKVR-KERPSEAEIRARVEELLRLVQLEGLADRYP-----AQLSGGQRQRVALARALAVEPKVLLLDEP 164 (345)
T ss_pred cchHHhhhhhccccc-ccCCChhhHHHHHHHHHHHhcccchhhcCc-----hhcChHHHHHHHHHHHhhcCCCeEeecCC
Confidence 999999999998777 334556778889999999999999998875 57999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhhhhheeecCcEEEEECCCCc
Q 000808 857 TSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVGPLGR 917 (1275)
Q Consensus 857 tsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~~~ 917 (1275)
+++||..-+..+.+.|+++.++ |.|++++|||+. +.++.+||+++|++ |++...||+++
T Consensus 165 f~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~e-ea~~ladrvvvl~~-G~Ieqvg~p~e 224 (345)
T COG1118 165 FGALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQE-EALELADRVVVLNQ-GRIEQVGPPDE 224 (345)
T ss_pred chhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHH-HHHhhcceEEEecC-CeeeeeCCHHH
Confidence 9999999999999999998876 999999999986 79999999999996 79999999853
No 60
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.5e-41 Score=334.95 Aligned_cols=219 Identities=23% Similarity=0.309 Sum_probs=187.5
Q ss_pred cEEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCC---CCceEEEEEEEc
Q 000808 676 HSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRK---TGGYITGNITIS 752 (1275)
Q Consensus 676 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~---~~~~~~G~i~~~ 752 (1275)
..++.+|+++.|. ++.+|+|||+.|++++++|+||||||||||||+++.... ++-.++|+|.++
T Consensus 6 ~~~~~~~l~~yYg-------------~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~ 72 (253)
T COG1117 6 PAIEVRDLNLYYG-------------DKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLD 72 (253)
T ss_pred ceeEecceeEEEC-------------chhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEEC
Confidence 4588889988773 467999999999999999999999999999999999743 344678999999
Q ss_pred CccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccc-cccccCCC
Q 000808 753 GYPKKQ-----ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLR-QSLVGLPG 826 (1275)
Q Consensus 753 g~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~-~~~~~~~~ 826 (1275)
|+++.. ..+|+.+|.|+|.+.-|| +|++||+.|+.++.... +++.++.|++.|+...|++.. |.+-..
T Consensus 73 g~ni~~~~~d~~~lRr~vGMVFQkPnPFp-~SIydNVayG~r~~g~~---~~~ldeiVe~sLk~AaLWdEVKDrL~~s-- 146 (253)
T COG1117 73 GKNIYDPKVDVVELRRRVGMVFQKPNPFP-MSIYDNVAYGLRLHGIK---DKELDEIVESSLKKAALWDEVKDRLHKS-- 146 (253)
T ss_pred CeeccCCCCCHHHHHHHheeeccCCCCCC-chHHHHHHHhHHhhccc---hHHHHHHHHHHHHHhHhHHHhHHHhhCC--
Confidence 998643 246889999999999999 99999999998776432 266788899999999987643 433222
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecC
Q 000808 827 ESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRG 906 (1275)
Q Consensus 827 ~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~g 906 (1275)
..+|||||+||+||||||+.+|+||+||||||+|||.+...|-+++.++++ .-|||++||.+. ......|+..++..
T Consensus 147 a~~LSGGQQQRLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~-~yTIviVTHnmq-QAaRvSD~taFf~~- 223 (253)
T COG1117 147 ALGLSGGQQQRLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELKK-KYTIVIVTHNMQ-QAARVSDYTAFFYL- 223 (253)
T ss_pred ccCCChhHHHHHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHh-ccEEEEEeCCHH-HHHHHhHhhhhhcc-
Confidence 347999999999999999999999999999999999999999999999974 689999999985 56788999999996
Q ss_pred cEEEEECCCC
Q 000808 907 GQEIYVGPLG 916 (1275)
Q Consensus 907 g~~~~~g~~~ 916 (1275)
|+++.+|+++
T Consensus 224 G~LvE~g~T~ 233 (253)
T COG1117 224 GELVEFGPTD 233 (253)
T ss_pred cEEEEEcCHH
Confidence 7999999973
No 61
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=4.3e-41 Score=376.47 Aligned_cols=217 Identities=27% Similarity=0.382 Sum_probs=194.3
Q ss_pred cEEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCcc
Q 000808 676 HSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 755 (1275)
Q Consensus 676 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~ 755 (1275)
..++++|++.++. +..+|+|+|++|++||+++|+|||||||||||++|+|... +.+|+|.++|.+
T Consensus 4 ~~l~i~~v~k~yg-------------~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~--p~~G~I~l~G~~ 68 (352)
T COG3842 4 PALEIRNVSKSFG-------------DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQ--PSSGEILLDGED 68 (352)
T ss_pred ceEEEEeeeeecC-------------CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEE
Confidence 4688999988773 4579999999999999999999999999999999999876 348999999998
Q ss_pred CCcc-cccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHH
Q 000808 756 KKQE-TFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQ 834 (1275)
Q Consensus 756 ~~~~-~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGe 834 (1275)
+... ..+|.+|+|+|+..+||+|||.||+.|+.+++ ....+++.+++++++++.++|.+..++.+ .+|||||
T Consensus 69 i~~lpp~kR~ig~VFQ~YALFPHltV~~NVafGLk~~--~~~~~~~i~~rv~e~L~lV~L~~~~~R~p-----~qLSGGQ 141 (352)
T COG3842 69 ITDVPPEKRPIGMVFQSYALFPHMTVEENVAFGLKVR--KKLKKAEIKARVEEALELVGLEGFADRKP-----HQLSGGQ 141 (352)
T ss_pred CCCCChhhcccceeecCcccCCCCcHHHHhhhhhhhc--CCCCHHHHHHHHHHHHHHcCchhhhhhCh-----hhhChHH
Confidence 7653 35788999999999999999999999998743 23445667889999999999999988876 5799999
Q ss_pred HHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhhhhheeecCcEEEEEC
Q 000808 835 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVG 913 (1275)
Q Consensus 835 rqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g 913 (1275)
||||+|||||+.+|++|+||||.|+||..-+.++...++++.++ |.|.|++|||.. +.+.+.|||.+|++ |++...|
T Consensus 142 qQRVALARAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqe-EAl~msDrI~Vm~~-G~I~Q~g 219 (352)
T COG3842 142 QQRVALARALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQE-EALAMSDRIAVMND-GRIEQVG 219 (352)
T ss_pred HHHHHHHHHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHH-HHhhhccceEEccC-CceeecC
Confidence 99999999999999999999999999999999999999998765 999999999985 78899999999996 7999999
Q ss_pred CCC
Q 000808 914 PLG 916 (1275)
Q Consensus 914 ~~~ 916 (1275)
++.
T Consensus 220 tP~ 222 (352)
T COG3842 220 TPE 222 (352)
T ss_pred CHH
Confidence 884
No 62
>KOG0927 consensus Predicted transporter (ABC superfamily) [General function prediction only]
Probab=100.00 E-value=5.1e-40 Score=369.98 Aligned_cols=202 Identities=21% Similarity=0.265 Sum_probs=154.8
Q ss_pred CcEEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCc
Q 000808 675 PHSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGY 754 (1275)
Q Consensus 675 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~ 754 (1275)
|..+.++|+++.++. +..++++++|-+.+++.+|++||||+|||||||++.|... +..|.|.-.-+
T Consensus 387 ~pvi~~~nv~F~y~~------------~~~iy~~l~fgid~~srvAlVGPNG~GKsTLlKl~~gdl~--p~~G~vs~~~H 452 (614)
T KOG0927|consen 387 PPVIMVQNVSFGYSD------------NPMIYKKLNFGIDLDSRVALVGPNGAGKSTLLKLITGDLQ--PTIGMVSRHSH 452 (614)
T ss_pred CCeEEEeccccCCCC------------cchhhhhhhcccCcccceeEecCCCCchhhhHHHHhhccc--ccccccccccc
Confidence 346889999988752 2269999999999999999999999999999999999765 34666543221
Q ss_pred cCCcccccceEEEeccC--CCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccc-cccccCCCCCCCC
Q 000808 755 PKKQETFTRISGYCEQN--DIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLR-QSLVGLPGESGLS 831 (1275)
Q Consensus 755 ~~~~~~~~~~~~~v~q~--~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~-~~~~~~~~~~~lS 831 (1275)
-..++..|+ +.+.-+.++-|+++=.. + .+...+.+..++..+||.... +..+ ++||
T Consensus 453 --------~~~~~y~Qh~~e~ldl~~s~le~~~~~~----~----~~~~~e~~r~ilgrfgLtgd~q~~p~-----~~LS 511 (614)
T KOG0927|consen 453 --------NKLPRYNQHLAEQLDLDKSSLEFMMPKF----P----DEKELEEMRSILGRFGLTGDAQVVPM-----SQLS 511 (614)
T ss_pred --------ccchhhhhhhHhhcCcchhHHHHHHHhc----c----ccchHHHHHHHHHHhCCCccccccch-----hhcc
Confidence 112333333 22333456777664211 1 123345678899999998544 3343 5799
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcEEEE
Q 000808 832 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQEIY 911 (1275)
Q Consensus 832 gGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~ 911 (1275)
+|||+||.+|+.++..|.+|+|||||+|||..+...+-+.|.+. ..+||+++||.. -+-+..+++.+..+++...+
T Consensus 512 ~Gqr~rVlFa~l~~kqP~lLlLDEPtnhLDi~tid~laeaiNe~---~Ggvv~vSHDfr-lI~qVaeEi~~c~~~~~~~~ 587 (614)
T KOG0927|consen 512 DGQRRRVLFARLAVKQPHLLLLDEPTNHLDIETIDALAEAINEF---PGGVVLVSHDFR-LISQVAEEIWVCENGTVTKW 587 (614)
T ss_pred cccchhHHHHHHHhcCCcEEEecCCCcCCCchhHHHHHHHHhcc---CCceeeeechhh-HHHHHHHHhHhhccCceeec
Confidence 99999999999999999999999999999999999999888875 458999999986 47788999999998888888
Q ss_pred ECCC
Q 000808 912 VGPL 915 (1275)
Q Consensus 912 ~g~~ 915 (1275)
.|..
T Consensus 588 ~G~i 591 (614)
T KOG0927|consen 588 DGDI 591 (614)
T ss_pred CccH
Confidence 8864
No 63
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.6e-40 Score=335.62 Aligned_cols=191 Identities=23% Similarity=0.350 Sum_probs=163.3
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCC----ccccceEEEeccccccCCCCCHHHHHHHHHhccC
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDE----FVPQRTAAYISQHDVHIGEMTVRETLAFSARCQG 76 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~----~~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~ 76 (1275)
+++|+|||||||||||++|.|+..|+ +|+|.++|.++.. ...|+.+|+|+|+..+||.+||.||+..+...-
T Consensus 30 vv~iiGpSGSGKSTlLRclN~LE~~~---~G~I~i~g~~~~~~~~~~~~R~~vGmVFQ~fnLFPHlTvleNv~lap~~v- 105 (240)
T COG1126 30 VVVIIGPSGSGKSTLLRCLNGLEEPD---SGSITVDGEDVGDKKDILKLRRKVGMVFQQFNLFPHLTVLENVTLAPVKV- 105 (240)
T ss_pred EEEEECCCCCCHHHHHHHHHCCcCCC---CceEEECCEeccchhhHHHHHHhcCeecccccccccchHHHHHHhhhHHH-
Confidence 47899999999999999999999987 9999999976632 134678999999999999999999999864210
Q ss_pred CCCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhhHH
Q 000808 77 VGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTG 156 (1275)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA 156 (1275)
.. ...++++....++|+.+||.+.+| .++..|||||||||+||
T Consensus 106 --------~~------------------------~~k~eA~~~A~~lL~~VGL~~ka~-----~yP~qLSGGQqQRVAIA 148 (240)
T COG1126 106 --------KK------------------------LSKAEAREKALELLEKVGLADKAD-----AYPAQLSGGQQQRVAIA 148 (240)
T ss_pred --------cC------------------------CCHHHHHHHHHHHHHHcCchhhhh-----hCccccCcHHHHHHHHH
Confidence 00 112234445677899999998876 45778999999999999
Q ss_pred HHHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhhHH
Q 000808 157 EMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVL 234 (1275)
Q Consensus 157 ~al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~~~ 234 (1275)
|||+.+|+++|+|||||+|||....++.+.++++++. +.|.+.++|.+.-+.+.+|||+.|++|++++.|+++++.
T Consensus 149 RALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~e--GmTMivVTHEM~FAr~VadrviFmd~G~iie~g~p~~~f 224 (240)
T COG1126 149 RALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEE--GMTMIIVTHEMGFAREVADRVIFMDQGKIIEEGPPEEFF 224 (240)
T ss_pred HHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHc--CCeEEEEechhHHHHHhhheEEEeeCCEEEEecCHHHHh
Confidence 9999999999999999999999999999999999863 566666899999999999999999999999999988764
No 64
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=1.8e-39 Score=370.10 Aligned_cols=216 Identities=27% Similarity=0.411 Sum_probs=188.4
Q ss_pred cEEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCcc
Q 000808 676 HSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 755 (1275)
Q Consensus 676 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~ 755 (1275)
..++++|+++.+. ++.+|+|||++|++||++||+||||||||||+++|+|..+ +.+|+|.++|.+
T Consensus 6 ~~i~i~~l~k~~~-------------~~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~--p~~G~v~i~G~~ 70 (306)
T PRK13537 6 APIDFRNVEKRYG-------------DKLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTH--PDAGSISLCGEP 70 (306)
T ss_pred ceEEEEeEEEEEC-------------CeEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEe
Confidence 3588999998873 2469999999999999999999999999999999999876 348999999998
Q ss_pred CCc--ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHH
Q 000808 756 KKQ--ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTE 833 (1275)
Q Consensus 756 ~~~--~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgG 833 (1275)
... ...++.+||++|++.+++.+||+||+.|.+.++ ..+..+..++++++++.++|.+..++.+ ++||||
T Consensus 71 ~~~~~~~~~~~ig~v~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G 142 (306)
T PRK13537 71 VPSRARHARQRVGVVPQFDNLDPDFTVRENLLVFGRYF---GLSAAAARALVPPLLEFAKLENKADAKV-----GELSGG 142 (306)
T ss_pred cccchHHHHhcEEEEeccCcCCCCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchHhcCch-----hhCCHH
Confidence 643 234577999999999999999999999876553 2233444567889999999998888876 469999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcEEEEEC
Q 000808 834 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVG 913 (1275)
Q Consensus 834 erqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g 913 (1275)
||||++||+||+++|++|+|||||+|||+.++..+++.|++++++|+|||++||+++ ++.+.+|++++|++ |++++.|
T Consensus 143 ~~qrl~la~aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~-e~~~~~d~i~il~~-G~i~~~g 220 (306)
T PRK13537 143 MKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFME-EAERLCDRLCVIEE-GRKIAEG 220 (306)
T ss_pred HHHHHHHHHHHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEC
Confidence 999999999999999999999999999999999999999999877999999999986 67788999999996 7999999
Q ss_pred CCC
Q 000808 914 PLG 916 (1275)
Q Consensus 914 ~~~ 916 (1275)
+++
T Consensus 221 ~~~ 223 (306)
T PRK13537 221 APH 223 (306)
T ss_pred CHH
Confidence 873
No 65
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=1.1e-40 Score=330.67 Aligned_cols=207 Identities=26% Similarity=0.355 Sum_probs=183.5
Q ss_pred cccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCCccc----ccceEEEeccCCCCCC
Q 000808 701 DKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQET----FTRISGYCEQNDIHSP 776 (1275)
Q Consensus 701 ~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~~~----~~~~~~~v~q~~~~~~ 776 (1275)
++++++++||+.|++||++|++|||||||||.+.++.|...+ .+|+|.+||.+++... .+.-+||+||++..|.
T Consensus 15 ~kr~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~--d~G~i~ld~~diT~lPm~~RArlGigYLpQE~SIFr 92 (243)
T COG1137 15 KKRKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRP--DSGKILLDDEDITKLPMHKRARLGIGYLPQEASIFR 92 (243)
T ss_pred CCeeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEec--CCceEEECCcccccCChHHHhhcCcccccccchHhh
Confidence 456799999999999999999999999999999999998763 4899999999876532 2345899999999999
Q ss_pred CCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCC
Q 000808 777 FVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEP 856 (1275)
Q Consensus 777 ~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~~l~~~p~illlDEP 856 (1275)
.+||+||++.....+.. +....+++++.+++++.+++.|+++.+. ..||||||||+.|||||+.+|+.++||||
T Consensus 93 ~LtV~dNi~~vlE~~~~-d~~~~~~~~~l~~LL~ef~i~hlr~~~a-----~sLSGGERRR~EIARaLa~~P~fiLLDEP 166 (243)
T COG1137 93 KLTVEDNIMAVLEIREK-DLKKAERKEELDALLEEFHITHLRDSKA-----YSLSGGERRRVEIARALAANPKFILLDEP 166 (243)
T ss_pred cCcHHHHHHHHHhhhhc-chhHHHHHHHHHHHHHHhchHHHhcCcc-----cccccchHHHHHHHHHHhcCCCEEEecCC
Confidence 99999999887766632 2233466677889999999999999875 46999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcEEEEECCCCc
Q 000808 857 TSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVGPLGR 917 (1275)
Q Consensus 857 tsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~~~ 917 (1275)
++|+||-+...|.++++.+.+.|.-|++|-|+.+ +....+||.+++.+ |+++.+|.+++
T Consensus 167 FAGVDPiaV~dIq~iI~~L~~rgiGvLITDHNVR-EtL~i~dRaYIi~~-G~vla~G~p~e 225 (243)
T COG1137 167 FAGVDPIAVIDIQRIIKHLKDRGIGVLITDHNVR-ETLDICDRAYIISD-GKVLAEGSPEE 225 (243)
T ss_pred ccCCCchhHHHHHHHHHHHHhCCceEEEccccHH-HHHhhhheEEEEec-CeEEecCCHHH
Confidence 9999999999999999999999999999999987 78999999999997 79999999853
No 66
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=2.1e-39 Score=316.09 Aligned_cols=197 Identities=27% Similarity=0.346 Sum_probs=173.0
Q ss_pred ceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCCcc-cccceEEEeccCCCCCCCCCHHHHHHH
Q 000808 708 GVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQE-TFTRISGYCEQNDIHSPFVTVYESLLY 786 (1275)
Q Consensus 708 ~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~~-~~~~~~~~v~q~~~~~~~ltv~e~l~~ 786 (1275)
..+++|++||++||+||||||||||||.|+|... +.+|+|+|||.+.... ...|-++.++|+..+|.++||.+|+-+
T Consensus 17 ~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~--P~~G~i~i~g~d~t~~~P~~RPVSmlFQEnNLFaHLtV~qNigL 94 (231)
T COG3840 17 RFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFET--PASGEILINGVDHTASPPAERPVSMLFQENNLFAHLTVAQNIGL 94 (231)
T ss_pred EEEEeecCCcEEEEECCCCccHHHHHHHHHhccC--CCCceEEEcCeecCcCCcccCChhhhhhccccchhhhhhhhhcc
Confidence 5678899999999999999999999999999876 3489999999987542 355678999999999999999999987
Q ss_pred HHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHH
Q 000808 787 SAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAA 866 (1275)
Q Consensus 787 ~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~ 866 (1275)
+..-.+ .. ..+.+++++.++..+||..+.+++.+ +|||||||||++||+|+++-+|++||||+|.|||.-+.
T Consensus 95 Gl~P~L--kL-~a~~r~~v~~aa~~vGl~~~~~RLP~-----~LSGGqRQRvALARclvR~~PilLLDEPFsALdP~LR~ 166 (231)
T COG3840 95 GLSPGL--KL-NAEQREKVEAAAAQVGLAGFLKRLPG-----ELSGGQRQRVALARCLVREQPILLLDEPFSALDPALRA 166 (231)
T ss_pred cCCccc--cc-CHHHHHHHHHHHHHhChhhHhhhCcc-----ccCchHHHHHHHHHHHhccCCeEEecCchhhcCHHHHH
Confidence 643222 12 34456779999999999999988864 69999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhhhhheeecCcEEEEECCCC
Q 000808 867 IVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVGPLG 916 (1275)
Q Consensus 867 ~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~~ 916 (1275)
++..++.+++++ +.|++++||+|+ +.....|+++++++ |++.+.|+..
T Consensus 167 eMl~Lv~~l~~E~~~TllmVTH~~~-Da~~ia~~~~fl~~-Gri~~~g~~~ 215 (231)
T COG3840 167 EMLALVSQLCDERKMTLLMVTHHPE-DAARIADRVVFLDN-GRIAAQGSTQ 215 (231)
T ss_pred HHHHHHHHHHHhhCCEEEEEeCCHH-HHHHhhhceEEEeC-CEEEeeccHH
Confidence 999999998754 899999999997 78899999999996 7999999863
No 67
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=8.8e-39 Score=366.52 Aligned_cols=218 Identities=23% Similarity=0.307 Sum_probs=186.7
Q ss_pred EEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCC
Q 000808 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1275)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 757 (1275)
++++|+++.++.. ...+.+|+||||++++||+++|+||||||||||+++|+|..++ .+|+|.++|.++.
T Consensus 2 I~~~~lsk~y~~~---------~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p--~~G~I~i~G~~i~ 70 (343)
T TIGR02314 2 IKLSNITKVFHQG---------TKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERP--TSGSVIVDGQDLT 70 (343)
T ss_pred EEEEEEEEEECCC---------CcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CceEEEECCEECC
Confidence 6789999887411 0124699999999999999999999999999999999998763 4899999998764
Q ss_pred cc------cccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCC
Q 000808 758 QE------TFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLS 831 (1275)
Q Consensus 758 ~~------~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lS 831 (1275)
.. ..++.+||++|+..+++.+||+||+.+..... ..++++.++++.++++.+||.+..|... +.||
T Consensus 71 ~~~~~~l~~~r~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~---~~~~~~~~~~v~e~l~~vgL~~~~~~~~-----~~LS 142 (343)
T TIGR02314 71 TLSNSELTKARRQIGMIFQHFNLLSSRTVFGNVALPLELD---NTPKDEIKRKVTELLALVGLGDKHDSYP-----SNLS 142 (343)
T ss_pred cCCHHHHHHHhcCEEEEECCccccccCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhhCCh-----hhCC
Confidence 31 13567999999999999999999999876533 2344556677899999999998888775 4799
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhhhhheeecCcEEE
Q 000808 832 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDELFLMKRGGQEI 910 (1275)
Q Consensus 832 gGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~ 910 (1275)
|||||||+|||||+.+|++|+||||||+||+.++..+++.|+++.++ |.|||++||+++ .+.+.||++++|++ |+++
T Consensus 143 gGqkQRV~IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~-~v~~~~d~v~vl~~-G~iv 220 (343)
T TIGR02314 143 GGQKQRVAIARALASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMD-VVKRICDCVAVISN-GELI 220 (343)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999999765 899999999975 56688999999985 7999
Q ss_pred EECCCC
Q 000808 911 YVGPLG 916 (1275)
Q Consensus 911 ~~g~~~ 916 (1275)
..|++.
T Consensus 221 ~~g~~~ 226 (343)
T TIGR02314 221 EQGTVS 226 (343)
T ss_pred EEcCHH
Confidence 999863
No 68
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.6e-39 Score=369.70 Aligned_cols=216 Identities=25% Similarity=0.365 Sum_probs=188.1
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 756 (1275)
.++++|++++++ +++.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++
T Consensus 3 ~l~i~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~--p~~G~I~~~g~~i 68 (356)
T PRK11650 3 GLKLQAVRKSYD------------GKTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLER--ITSGEIWIGGRVV 68 (356)
T ss_pred EEEEEeEEEEeC------------CCCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCC--CCceEEEECCEEC
Confidence 378899988762 12469999999999999999999999999999999999876 3589999999876
Q ss_pred Cc-ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHH
Q 000808 757 KQ-ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQR 835 (1275)
Q Consensus 757 ~~-~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGer 835 (1275)
.. ...++.+|||+|++.++|++||+||+.|+...+ ..++.+.+++++++++.+||.+..+..+ ..||||||
T Consensus 69 ~~~~~~~r~ig~v~Q~~~lfp~~tv~eNi~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LSgGq~ 140 (356)
T PRK11650 69 NELEPADRDIAMVFQNYALYPHMSVRENMAYGLKIR---GMPKAEIEERVAEAARILELEPLLDRKP-----RELSGGQR 140 (356)
T ss_pred CCCCHHHCCEEEEeCCccccCCCCHHHHHHhHHhhc---CCCHHHHHHHHHHHHHHcCChhHhhCCh-----hhCCHHHH
Confidence 43 123467999999999999999999999986543 2344556678899999999998888776 47999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhhhhheeecCcEEEEECC
Q 000808 836 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVGP 914 (1275)
Q Consensus 836 qrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~ 914 (1275)
|||+|||||+.+|++|+||||||+||+.++..+.+.|+++.++ |.|+|++||++. ++..++|++++|++ |+++..|+
T Consensus 141 QRvalARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-ea~~l~D~i~vl~~-G~i~~~g~ 218 (356)
T PRK11650 141 QRVAMGRAIVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQV-EAMTLADRVVVMNG-GVAEQIGT 218 (356)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEEECC
Confidence 9999999999999999999999999999999999999998765 899999999985 68899999999985 89999998
Q ss_pred CC
Q 000808 915 LG 916 (1275)
Q Consensus 915 ~~ 916 (1275)
+.
T Consensus 219 ~~ 220 (356)
T PRK11650 219 PV 220 (356)
T ss_pred HH
Confidence 74
No 69
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.2e-39 Score=331.80 Aligned_cols=217 Identities=27% Similarity=0.344 Sum_probs=180.1
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 756 (1275)
-++.+|++..++... ...++|+|||++|.+||++||+|+||||||||.++|+|..++ .+|+|.++|.+.
T Consensus 3 ~l~v~nl~~~y~~~~---------~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p--~~G~I~~~G~~~ 71 (252)
T COG1124 3 LLSVRNLSIVYGGGK---------FAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKP--SSGSILLDGKPL 71 (252)
T ss_pred eEEEeceEEEecCCc---------chhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCC--CCceEEECCccc
Confidence 478899988875321 123699999999999999999999999999999999998763 589999999876
Q ss_pred Ccc----cccceEEEeccCCC--CCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccc-cccccCCCCCC
Q 000808 757 KQE----TFTRISGYCEQNDI--HSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLR-QSLVGLPGESG 829 (1275)
Q Consensus 757 ~~~----~~~~~~~~v~q~~~--~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~-~~~~~~~~~~~ 829 (1275)
... .+.+.+.+|+||+. +.|..||++.+.-.... ...++. ++++.++++.+||.+.. ++. +.+
T Consensus 72 ~~~~~~~~~~~~VQmVFQDp~~SLnP~~tv~~~l~Epl~~---~~~~~~--~~~i~~~L~~VgL~~~~l~R~-----P~e 141 (252)
T COG1124 72 APKKRAKAFYRPVQMVFQDPYSSLNPRRTVGRILSEPLRP---HGLSKS--QQRIAELLDQVGLPPSFLDRR-----PHE 141 (252)
T ss_pred CccccchhhccceeEEecCCccccCcchhHHHHHhhhhcc---CCccHH--HHHHHHHHHHcCCCHHHHhcC-----chh
Confidence 442 35678999999986 66889999988655432 223332 33489999999997533 333 357
Q ss_pred CCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhhhhheeecCcE
Q 000808 830 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDELFLMKRGGQ 908 (1275)
Q Consensus 830 lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~ 908 (1275)
||||||||+||||||+.+|++|+||||||+||+..+.+|+++|.++.++ +.|.|+++||.+ -+..+|||+++|++ |+
T Consensus 142 LSGGQ~QRiaIARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~-~v~~~cdRi~Vm~~-G~ 219 (252)
T COG1124 142 LSGGQRQRIAIARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLA-LVEHMCDRIAVMDN-GQ 219 (252)
T ss_pred cChhHHHHHHHHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHH-HHHHHhhheeeeeC-Ce
Confidence 9999999999999999999999999999999999999999999999765 789999999986 47789999999996 79
Q ss_pred EEEECCCC
Q 000808 909 EIYVGPLG 916 (1275)
Q Consensus 909 ~~~~g~~~ 916 (1275)
++..++.+
T Consensus 220 ivE~~~~~ 227 (252)
T COG1124 220 IVEIGPTE 227 (252)
T ss_pred EEEeechh
Confidence 99999974
No 70
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=1.1e-38 Score=368.70 Aligned_cols=215 Identities=26% Similarity=0.368 Sum_probs=189.0
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 756 (1275)
.++++|+++++. .+.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~--p~~G~I~i~g~~~ 68 (353)
T TIGR03265 4 YLSIDNIRKRFG-------------AFTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLER--QTAGTIYQGGRDI 68 (353)
T ss_pred EEEEEEEEEEeC-------------CeEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCC--CCceEEEECCEEC
Confidence 488999998873 2459999999999999999999999999999999999876 3589999999876
Q ss_pred Cc-ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHH
Q 000808 757 KQ-ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQR 835 (1275)
Q Consensus 757 ~~-~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGer 835 (1275)
.. ...+|.+|||+|+..++|++||+||+.|+...+ ..+..+.+++++++++.++|.+..++.. .+||||||
T Consensus 69 ~~~~~~~r~ig~v~Q~~~lfp~~tv~eNi~~~~~~~---~~~~~~~~~~~~~~l~~l~L~~~~~~~~-----~~LSgGq~ 140 (353)
T TIGR03265 69 TRLPPQKRDYGIVFQSYALFPNLTVADNIAYGLKNR---GMGRAEVAERVAELLDLVGLPGSERKYP-----GQLSGGQQ 140 (353)
T ss_pred CCCCHHHCCEEEEeCCcccCCCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCCchhhCCh-----hhCCHHHH
Confidence 43 223567999999999999999999999986543 2345566778999999999999888765 47999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhhhhheeecCcEEEEECC
Q 000808 836 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVGP 914 (1275)
Q Consensus 836 qrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~ 914 (1275)
|||+|||||+.+|++++||||||+||+.++..+.+.|+++.++ |.|+|++||+++ ++..++|++++|++ |+++..|+
T Consensus 141 QRvaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~-ea~~l~d~i~vl~~-G~i~~~g~ 218 (353)
T TIGR03265 141 QRVALARALATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQE-EALSMADRIVVMNH-GVIEQVGT 218 (353)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999998765 899999999986 68899999999996 79999998
Q ss_pred CC
Q 000808 915 LG 916 (1275)
Q Consensus 915 ~~ 916 (1275)
+.
T Consensus 219 ~~ 220 (353)
T TIGR03265 219 PQ 220 (353)
T ss_pred HH
Confidence 74
No 71
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-38 Score=366.46 Aligned_cols=215 Identities=24% Similarity=0.378 Sum_probs=189.1
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 756 (1275)
.++++|+++.+. ++.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++
T Consensus 6 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~--p~~G~I~~~g~~i 70 (351)
T PRK11432 6 FVVLKNITKRFG-------------SNTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEK--PTEGQIFIDGEDV 70 (351)
T ss_pred EEEEEeEEEEEC-------------CeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCC--CCceEEEECCEEC
Confidence 588999998873 2459999999999999999999999999999999999876 3489999999876
Q ss_pred Ccc-cccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHH
Q 000808 757 KQE-TFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQR 835 (1275)
Q Consensus 757 ~~~-~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGer 835 (1275)
... ..++.+|||+|+..++|++||+||+.|+...+ ..++.+.+++++++++.++|.+..++.. ..||||||
T Consensus 71 ~~~~~~~r~ig~vfQ~~~lfp~~tv~eNi~~~l~~~---~~~~~~~~~~v~~~l~~~gl~~~~~r~~-----~~LSgGq~ 142 (351)
T PRK11432 71 THRSIQQRDICMVFQSYALFPHMSLGENVGYGLKML---GVPKEERKQRVKEALELVDLAGFEDRYV-----DQISGGQQ 142 (351)
T ss_pred CCCCHHHCCEEEEeCCcccCCCCCHHHHHHHHHhHc---CCCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHH
Confidence 532 23467999999999999999999999987543 2345566778999999999998887765 47999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhhhhheeecCcEEEEECC
Q 000808 836 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVGP 914 (1275)
Q Consensus 836 qrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~ 914 (1275)
|||+|||||+.+|++|+|||||||||+.++..+.+.|+++.++ |+|+|++||+++ ++..++|++++|++ |+++..|+
T Consensus 143 QRVaLARaL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-e~~~laD~i~vm~~-G~i~~~g~ 220 (351)
T PRK11432 143 QRVALARALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQS-EAFAVSDTVIVMNK-GKIMQIGS 220 (351)
T ss_pred HHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999998765 899999999986 67889999999996 79999998
Q ss_pred CC
Q 000808 915 LG 916 (1275)
Q Consensus 915 ~~ 916 (1275)
++
T Consensus 221 ~~ 222 (351)
T PRK11432 221 PQ 222 (351)
T ss_pred HH
Confidence 74
No 72
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.9e-38 Score=350.74 Aligned_cols=213 Identities=25% Similarity=0.356 Sum_probs=180.6
Q ss_pred EEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCCc
Q 000808 679 TFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 758 (1275)
Q Consensus 679 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 758 (1275)
+++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+|+|+|..++ .+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p--~~G~i~~~g~~~~~ 66 (235)
T cd03261 2 ELRGLTKSFG-------------GRTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRP--DSGEVLIDGEDISG 66 (235)
T ss_pred eEEEEEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEccc
Confidence 5778887763 23599999999999999999999999999999999998653 48999999987542
Q ss_pred ------ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCH
Q 000808 759 ------ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLST 832 (1275)
Q Consensus 759 ------~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSg 832 (1275)
..+++.++|++|++.+++.+||.||+.+...... ..+.++.+++++++++.+++.+..++.+ ..|||
T Consensus 67 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 139 (235)
T cd03261 67 LSEAELYRLRRRMGMLFQSGALFDSLTVFENVAFPLREHT--RLSEEEIREIVLEKLEAVGLRGAEDLYP-----AELSG 139 (235)
T ss_pred cChhhHHHHhcceEEEccCcccCCCCcHHHHHHHHHhhcc--CCCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCH
Confidence 1245679999999999999999999988643221 1234444567889999999988777665 46999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhhhhheeecCcEEEE
Q 000808 833 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDELFLMKRGGQEIY 911 (1275)
Q Consensus 833 Gerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~ 911 (1275)
||||||+|||||+.+|++|+|||||+|||+.++..+++.|++++++ |+|||+++|+++ ++...+|++++|++ |++++
T Consensus 140 G~~qrv~ia~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~-~~~~~~d~v~~l~~-G~i~~ 217 (235)
T cd03261 140 GMKKRVALARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLD-TAFAIADRIAVLYD-GKIVA 217 (235)
T ss_pred HHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhcCEEEEEEC-CeEEE
Confidence 9999999999999999999999999999999999999999998764 899999999986 56778999999986 78999
Q ss_pred ECCC
Q 000808 912 VGPL 915 (1275)
Q Consensus 912 ~g~~ 915 (1275)
.|++
T Consensus 218 ~g~~ 221 (235)
T cd03261 218 EGTP 221 (235)
T ss_pred ecCH
Confidence 9876
No 73
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=2.2e-38 Score=364.36 Aligned_cols=216 Identities=26% Similarity=0.377 Sum_probs=187.6
Q ss_pred cEEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCcc
Q 000808 676 HSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 755 (1275)
Q Consensus 676 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~ 755 (1275)
..++++|++++++ ++.+|+||||+|++||++||+||||||||||+++|+|..++ .+|+|.++|.+
T Consensus 40 ~~i~i~nl~k~y~-------------~~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p--~~G~i~i~G~~ 104 (340)
T PRK13536 40 VAIDLAGVSKSYG-------------DKAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSP--DAGKITVLGVP 104 (340)
T ss_pred eeEEEEEEEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCC--CceEEEECCEE
Confidence 3589999998873 34699999999999999999999999999999999998763 48999999988
Q ss_pred CCc--ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHH
Q 000808 756 KKQ--ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTE 833 (1275)
Q Consensus 756 ~~~--~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgG 833 (1275)
... ...++.+||++|++.+++.+|++|++.+.+.+.. .+..+..++++++++.++|.+..++.++ .||||
T Consensus 105 ~~~~~~~~~~~ig~v~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~ll~~~~L~~~~~~~~~-----~LS~G 176 (340)
T PRK13536 105 VPARARLARARIGVVPQFDNLDLEFTVRENLLVFGRYFG---MSTREIEAVIPSLLEFARLESKADARVS-----DLSGG 176 (340)
T ss_pred CCcchHHHhccEEEEeCCccCCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCchhhCCChh-----hCCHH
Confidence 643 2345679999999999999999999987665431 2333445567889999999988888764 69999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcEEEEEC
Q 000808 834 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVG 913 (1275)
Q Consensus 834 erqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g 913 (1275)
||||++||+||+++|++|+|||||+|||+.++..+++.|+++.++|+|||++||+++ ++.+.||++++|++ |++++.|
T Consensus 177 ~kqrv~lA~aL~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~-e~~~~~d~i~il~~-G~i~~~g 254 (340)
T PRK13536 177 MKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFME-EAERLCDRLCVLEA-GRKIAEG 254 (340)
T ss_pred HHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEc
Confidence 999999999999999999999999999999999999999999877999999999986 67789999999996 7999999
Q ss_pred CCC
Q 000808 914 PLG 916 (1275)
Q Consensus 914 ~~~ 916 (1275)
+++
T Consensus 255 ~~~ 257 (340)
T PRK13536 255 RPH 257 (340)
T ss_pred CHH
Confidence 873
No 74
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=2.1e-38 Score=366.66 Aligned_cols=215 Identities=24% Similarity=0.333 Sum_probs=188.3
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEE--EEEEEcCc
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIT--GNITISGY 754 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~--G~i~~~g~ 754 (1275)
.++++|+++++. ++.+|+|+|+++++||+++|+|||||||||||++|+|..++ .+ |+|.++|.
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p--~~~~G~i~~~g~ 69 (362)
T TIGR03258 5 GIRIDHLRVAYG-------------ANTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKA--AGLTGRIAIADR 69 (362)
T ss_pred EEEEEEEEEEEC-------------CeEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCCCEEEEECCE
Confidence 588999998873 23599999999999999999999999999999999998763 46 99999998
Q ss_pred cCCc-ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHH
Q 000808 755 PKKQ-ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTE 833 (1275)
Q Consensus 755 ~~~~-~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgG 833 (1275)
+... ...++.+|||+|+..++|.+||+||+.|+...+ ..+..+.+++++++++.++|.+..++.+ ++||||
T Consensus 70 ~~~~~~~~~r~ig~vfQ~~~l~p~~tv~enl~~~l~~~---~~~~~~~~~~v~~~l~~~gL~~~~~~~~-----~~LSgG 141 (362)
T TIGR03258 70 DLTHAPPHKRGLALLFQNYALFPHLKVEDNVAFGLRAQ---KMPKADIAERVADALKLVGLGDAAAHLP-----AQLSGG 141 (362)
T ss_pred ECCCCCHHHCCEEEEECCcccCCCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHhcCCCchhhCCh-----hhCCHH
Confidence 7643 123567999999999999999999999986543 2344556678999999999999888876 479999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC--CCEEEEEecCCCHHHHHhhhhhheeecCcEEEE
Q 000808 834 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT--GRTVVCTIHQPSIDIFESFDELFLMKRGGQEIY 911 (1275)
Q Consensus 834 erqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~--g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~ 911 (1275)
|||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|+|++||+++ ++..++|++++|++ |+++.
T Consensus 142 q~QRvaLARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~-ea~~l~dri~vl~~-G~i~~ 219 (362)
T TIGR03258 142 MQQRIAIARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQD-DALTLADKAGIMKD-GRLAA 219 (362)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 999999999999999999999999999999999999999998876 799999999986 67889999999986 79999
Q ss_pred ECCCC
Q 000808 912 VGPLG 916 (1275)
Q Consensus 912 ~g~~~ 916 (1275)
.|++.
T Consensus 220 ~g~~~ 224 (362)
T TIGR03258 220 HGEPQ 224 (362)
T ss_pred EcCHH
Confidence 99874
No 75
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=5.2e-39 Score=330.34 Aligned_cols=194 Identities=25% Similarity=0.379 Sum_probs=169.5
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCcc---ccceEEEeccccccCCCCCHHHHHHHHHhccCC
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV---PQRTAAYISQHDVHIGEMTVRETLAFSARCQGV 77 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~~---~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~ 77 (1275)
+++++|||||||||+|++|.++++|+ +|+|.+||+++.+.. .|+.+|||-|+-.+||++||.|||.+-..+.+.
T Consensus 29 f~vliGpSGsGKTTtLkMINrLiept---~G~I~i~g~~i~~~d~~~LRr~IGYviQqigLFPh~Tv~eNIa~VP~L~~w 105 (309)
T COG1125 29 FLVLIGPSGSGKTTTLKMINRLIEPT---SGEILIDGEDISDLDPVELRRKIGYVIQQIGLFPHLTVAENIATVPKLLGW 105 (309)
T ss_pred EEEEECCCCCcHHHHHHHHhcccCCC---CceEEECCeecccCCHHHHHHhhhhhhhhcccCCCccHHHHHHhhhhhcCC
Confidence 47899999999999999999999998 999999999987653 478999999999999999999999986665432
Q ss_pred CCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhhHHH
Q 000808 78 GSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGE 157 (1275)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~ 157 (1275)
. +++.+.+++++++.+||+... ..+++++.|||||+|||.+||
T Consensus 106 ~----------------------------------k~~i~~r~~ELl~lvgL~p~~---~~~RyP~eLSGGQQQRVGv~R 148 (309)
T COG1125 106 D----------------------------------KERIKKRADELLDLVGLDPSE---YADRYPHELSGGQQQRVGVAR 148 (309)
T ss_pred C----------------------------------HHHHHHHHHHHHHHhCCCHHH---HhhcCchhcCcchhhHHHHHH
Confidence 1 112234578899999997532 346889999999999999999
Q ss_pred HHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhhHHH
Q 000808 158 MMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVLD 235 (1275)
Q Consensus 158 al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~~~~ 235 (1275)
||+.+|+|+|+|||+++|||-++.++.+.++++-+.. ++||+.++|+.+|+++++|||++|++|+++..++|+++..
T Consensus 149 ALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l-~kTivfVTHDidEA~kLadri~vm~~G~i~Q~~~P~~il~ 225 (309)
T COG1125 149 ALAADPPILLMDEPFGALDPITRKQLQEEIKELQKEL-GKTIVFVTHDIDEALKLADRIAVMDAGEIVQYDTPDEILA 225 (309)
T ss_pred HHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHh-CCEEEEEecCHHHHHhhhceEEEecCCeEEEeCCHHHHHh
Confidence 9999999999999999999999999999999876655 5566668999999999999999999999999999999875
No 76
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.5e-38 Score=342.34 Aligned_cols=215 Identities=23% Similarity=0.335 Sum_probs=188.0
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 756 (1275)
-+.+++++|+++ +++.+|+|+|+++++||.++|+|+||||||||+++|+|...+ .+|.|.++|.+.
T Consensus 3 ~i~~~~l~~~y~------------~~~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p--~~G~v~~~g~~~ 68 (235)
T COG1122 3 MIEAENLSFRYP------------GRKAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKP--TSGEVLVDGLDT 68 (235)
T ss_pred eEEEEEEEEEcC------------CCceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcC--CCCEEEECCeec
Confidence 367899999874 125799999999999999999999999999999999998763 479999999885
Q ss_pred C----cccccceEEEeccCCCC-CCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCC
Q 000808 757 K----QETFTRISGYCEQNDIH-SPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLS 831 (1275)
Q Consensus 757 ~----~~~~~~~~~~v~q~~~~-~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lS 831 (1275)
. ....++.+|||+|++.. +-.-||.|.+.|+..- ...+.++.+++++++++.+|+.+.+++.. ..||
T Consensus 69 ~~~~~~~~~~~~vG~VfQnpd~q~~~~tV~~evafg~~n---~g~~~~e~~~rv~~~l~~vgl~~~~~r~p-----~~LS 140 (235)
T COG1122 69 SSEKSLLELRQKVGLVFQNPDDQLFGPTVEDEVAFGLEN---LGLPREEIEERVAEALELVGLEELLDRPP-----FNLS 140 (235)
T ss_pred cchhhHHHhhcceEEEEECcccccccCcHHHHHhhchhh---cCCCHHHHHHHHHHHHHHcCchhhccCCc-----cccC
Confidence 5 34567889999999754 3457999999998642 24556678899999999999999988775 5799
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhhhhheeecCcEEE
Q 000808 832 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDELFLMKRGGQEI 910 (1275)
Q Consensus 832 gGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~ 910 (1275)
|||||||+||.+|+.+|++|+|||||||||+.++..+++.++++.++ |+|+|++|||.+ .+...+|++++|++ |+++
T Consensus 141 GGqkqRvaIA~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~-~~~~~ad~v~vl~~-G~i~ 218 (235)
T COG1122 141 GGQKQRVAIAGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLE-LVLEYADRVVVLDD-GKIL 218 (235)
T ss_pred CcceeeHHhhHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHH-HHHhhCCEEEEEEC-CEEe
Confidence 99999999999999999999999999999999999999999999877 689999999986 57788999999996 7999
Q ss_pred EECCC
Q 000808 911 YVGPL 915 (1275)
Q Consensus 911 ~~g~~ 915 (1275)
++|++
T Consensus 219 ~~g~p 223 (235)
T COG1122 219 ADGDP 223 (235)
T ss_pred ecCCH
Confidence 99986
No 77
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.3e-39 Score=340.27 Aligned_cols=191 Identities=25% Similarity=0.322 Sum_probs=168.9
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCcc------ccceEEEeccccccCCCCCHHHHHHHHHhc
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV------PQRTAAYISQHDVHIGEMTVRETLAFSARC 74 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~~------~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~ 74 (1275)
+.+|+|+||||||||+++|.++..|+ +|+|.++|.++.... .|+.+|+++|+..++.+.||.||+.|..++
T Consensus 34 I~GIIG~SGAGKSTLiR~iN~Le~Pt---sG~v~v~G~di~~l~~~~Lr~~R~~IGMIFQhFnLLssrTV~~NvA~PLei 110 (339)
T COG1135 34 IFGIIGYSGAGKSTLLRLINLLERPT---SGSVFVDGQDLTALSEAELRQLRQKIGMIFQHFNLLSSRTVFENVAFPLEL 110 (339)
T ss_pred EEEEEcCCCCcHHHHHHHHhccCCCC---CceEEEcCEecccCChHHHHHHHhhccEEeccccccccchHHhhhhhhHhh
Confidence 47899999999999999999999998 999999998876543 357899999999999999999999998877
Q ss_pred cCCCCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhh
Q 000808 75 QGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVT 154 (1275)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvs 154 (1275)
.+.. +.+.+.++.++|+.+||++..+ .++.+|||||||||+
T Consensus 111 ag~~----------------------------------k~ei~~RV~elLelVgL~dk~~-----~yP~qLSGGQKQRVa 151 (339)
T COG1135 111 AGVP----------------------------------KAEIKQRVAELLELVGLSDKAD-----RYPAQLSGGQKQRVA 151 (339)
T ss_pred cCCC----------------------------------HHHHHHHHHHHHHHcCChhhhc-----cCchhcCcchhhHHH
Confidence 5421 1233446788999999997765 567789999999999
Q ss_pred HHHHHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhhHH
Q 000808 155 TGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVL 234 (1275)
Q Consensus 155 iA~al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~~~ 234 (1275)
|||||+.+|+|||+|||||+|||.+...|++.|+++.++. +.||+.++|-++-+.+.||||.+|++|++++.|+..++.
T Consensus 152 IARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~l-glTIvlITHEm~Vvk~ic~rVavm~~G~lvE~G~v~~vF 230 (339)
T COG1135 152 IARALANNPKILLCDEATSALDPETTQSILELLKDINREL-GLTIVLITHEMEVVKRICDRVAVLDQGRLVEEGTVSEVF 230 (339)
T ss_pred HHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHc-CCEEEEEechHHHHHHHhhhheEeeCCEEEEeccHHHhh
Confidence 9999999999999999999999999999999999988765 677777999999999999999999999999999988874
No 78
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=5.2e-38 Score=363.19 Aligned_cols=217 Identities=25% Similarity=0.383 Sum_probs=186.8
Q ss_pred EEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCC
Q 000808 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1275)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 757 (1275)
++++|+++.+. ++.+|+|+|+++++||+++|+|||||||||||++|+|..++ .+|+|.++|.+..
T Consensus 3 L~i~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p--~~G~I~i~g~~i~ 67 (353)
T PRK10851 3 IEIANIKKSFG-------------RTQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQ--TSGHIRFHGTDVS 67 (353)
T ss_pred EEEEEEEEEeC-------------CeEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEECC
Confidence 67889988763 24599999999999999999999999999999999998663 4899999998764
Q ss_pred cc-cccceEEEeccCCCCCCCCCHHHHHHHHHhccCC-CCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHH
Q 000808 758 QE-TFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLP-PEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQR 835 (1275)
Q Consensus 758 ~~-~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~-~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGer 835 (1275)
.. ..++.++|++|++.++|.+||+||+.|....+.. ...+.++.+++++++++.++|.+..+..+ ..||||||
T Consensus 68 ~~~~~~r~i~~v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~LSgGq~ 142 (353)
T PRK10851 68 RLHARDRKVGFVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLAHLADRYP-----AQLSGGQK 142 (353)
T ss_pred CCCHHHCCEEEEecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCchhhhCCh-----hhCCHHHH
Confidence 32 2346799999999999999999999987653211 12344556678899999999998887775 47999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhhhhheeecCcEEEEECC
Q 000808 836 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVGP 914 (1275)
Q Consensus 836 qrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~ 914 (1275)
|||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|+|++||+++ ++..++|++++|++ |++++.|+
T Consensus 143 QRvalArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~-ea~~~~Dri~vl~~-G~i~~~g~ 220 (353)
T PRK10851 143 QRVALARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQE-EAMEVADRVVVMSQ-GNIEQAGT 220 (353)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999998765 899999999986 67889999999996 79999998
Q ss_pred CC
Q 000808 915 LG 916 (1275)
Q Consensus 915 ~~ 916 (1275)
+.
T Consensus 221 ~~ 222 (353)
T PRK10851 221 PD 222 (353)
T ss_pred HH
Confidence 74
No 79
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5e-38 Score=342.06 Aligned_cols=210 Identities=28% Similarity=0.407 Sum_probs=176.7
Q ss_pred EEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCCc
Q 000808 679 TFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 758 (1275)
Q Consensus 679 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 758 (1275)
+++|+++.++ ++.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~~ 66 (213)
T cd03259 2 ELKGLSKTYG-------------SVRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLER--PDSGEILIDGRDVTG 66 (213)
T ss_pred eeeeeEEEeC-------------CeeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEcCc
Confidence 5678887763 2469999999999999999999999999999999999865 348999999987643
Q ss_pred -ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHH
Q 000808 759 -ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKR 837 (1275)
Q Consensus 759 -~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqr 837 (1275)
...++.++|++|++.+++.+|++||+.+..... ....+..+++++++++.+++.+..++.+ ..||||||||
T Consensus 67 ~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qr 138 (213)
T cd03259 67 VPPERRNIGMVFQDYALFPHLTVAENIAFGLKLR---GVPKAEIRARVRELLELVGLEGLLNRYP-----HELSGGQQQR 138 (213)
T ss_pred CchhhccEEEEcCchhhccCCcHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCChhhhhcCh-----hhCCHHHHHH
Confidence 123457899999998889999999998765332 1223344566889999999988777765 4699999999
Q ss_pred HHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhh-CCCEEEEEecCCCHHHHHhhhhhheeecCcEEEEEC
Q 000808 838 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVG 913 (1275)
Q Consensus 838 v~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g 913 (1275)
++|||+|+.+|++++|||||+|||+.++..+.+.|+++++ .|+|||+++|+++ ++.+.+|++++|.+ |+++..|
T Consensus 139 l~la~al~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v~~l~~-G~i~~~g 213 (213)
T cd03259 139 VALARALAREPSLLLLDEPLSALDAKLREELREELKELQRELGITTIYVTHDQE-EALALADRIAVMNE-GRIVQVG 213 (213)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhcCEEEEEEC-CEEEecC
Confidence 9999999999999999999999999999999999999876 4899999999985 56788999999986 6877654
No 80
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=6.9e-38 Score=363.54 Aligned_cols=216 Identities=22% Similarity=0.324 Sum_probs=188.4
Q ss_pred cEEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCcc
Q 000808 676 HSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 755 (1275)
Q Consensus 676 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~ 755 (1275)
..++++|+++++. ++.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+
T Consensus 13 ~~L~l~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~--p~~G~I~~~g~~ 77 (375)
T PRK09452 13 PLVELRGISKSFD-------------GKEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFET--PDSGRIMLDGQD 77 (375)
T ss_pred ceEEEEEEEEEEC-------------CeEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCC--CCceEEEECCEE
Confidence 3588999998873 2459999999999999999999999999999999999876 348999999987
Q ss_pred CCc-ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHH
Q 000808 756 KKQ-ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQ 834 (1275)
Q Consensus 756 ~~~-~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGe 834 (1275)
... ...++.+||++|++.++|.+||.||+.|+...+ ..+..+.+++++++++.++|.+..++.+ .+|||||
T Consensus 78 i~~~~~~~r~ig~vfQ~~~lfp~ltv~eNi~~~l~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~p-----~~LSgGq 149 (375)
T PRK09452 78 ITHVPAENRHVNTVFQSYALFPHMTVFENVAFGLRMQ---KTPAAEITPRVMEALRMVQLEEFAQRKP-----HQLSGGQ 149 (375)
T ss_pred CCCCCHHHCCEEEEecCcccCCCCCHHHHHHHHHhhc---CCCHHHHHHHHHHHHHHcCCchhhhCCh-----hhCCHHH
Confidence 643 223567999999999999999999999986533 2344555667899999999998888775 4799999
Q ss_pred HHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhhhhheeecCcEEEEEC
Q 000808 835 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVG 913 (1275)
Q Consensus 835 rqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g 913 (1275)
||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|+|++||++. ++..++|++++|++ |+++..|
T Consensus 150 ~QRVaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~-ea~~laDri~vl~~-G~i~~~g 227 (375)
T PRK09452 150 QQRVAIARAVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQE-EALTMSDRIVVMRD-GRIEQDG 227 (375)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEc
Confidence 99999999999999999999999999999999999999998765 899999999985 67889999999996 8999999
Q ss_pred CCC
Q 000808 914 PLG 916 (1275)
Q Consensus 914 ~~~ 916 (1275)
++.
T Consensus 228 ~~~ 230 (375)
T PRK09452 228 TPR 230 (375)
T ss_pred CHH
Confidence 873
No 81
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=5.1e-38 Score=342.78 Aligned_cols=208 Identities=23% Similarity=0.324 Sum_probs=175.1
Q ss_pred EEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCC
Q 000808 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1275)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 757 (1275)
++++|++++++. +.+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~~-----------~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 68 (216)
T TIGR00960 2 IRFEQVSKAYPG-----------GHQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEK--PTRGKIRFNGQDLT 68 (216)
T ss_pred eEEEEEEEEecC-----------CCeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEehh
Confidence 568899887731 12359999999999999999999999999999999999865 34899999998753
Q ss_pred cc------cccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCC
Q 000808 758 QE------TFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLS 831 (1275)
Q Consensus 758 ~~------~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lS 831 (1275)
.. .+++.++|++|++.+++.+||.||+.+....+ ....++.+++++++++.+|+.+..+..+ ..||
T Consensus 69 ~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 140 (216)
T TIGR00960 69 RLRGREIPFLRRHIGMVFQDHRLLSDRTVYDNVAFPLRII---GVPPRDANERVSAALEKVGLEGKAHALP-----MQLS 140 (216)
T ss_pred hcChhHHHHHHHhceEEecCccccccccHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCC
Confidence 21 13567899999999999999999998875432 1223344567889999999988777665 4699
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcE
Q 000808 832 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQ 908 (1275)
Q Consensus 832 gGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~ 908 (1275)
||||||++|||||+.+|++|+|||||+|||+.++..+.+.|++++++|+|||++||+++ .+.+.+|++++|.+ |+
T Consensus 141 gG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~-~~~~~~d~i~~l~~-G~ 215 (216)
T TIGR00960 141 GGEQQRVAIARAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDIN-LVETYRHRTLTLSR-GR 215 (216)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEeC-Cc
Confidence 99999999999999999999999999999999999999999998777899999999985 56678999999986 54
No 82
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-37 Score=361.58 Aligned_cols=216 Identities=24% Similarity=0.358 Sum_probs=188.1
Q ss_pred cEEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCcc
Q 000808 676 HSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 755 (1275)
Q Consensus 676 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~ 755 (1275)
..++++|+++.+. ++.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+
T Consensus 18 ~~l~l~~v~~~~~-------------~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~--p~~G~I~i~g~~ 82 (377)
T PRK11607 18 PLLEIRNLTKSFD-------------GQHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQ--PTAGQIMLDGVD 82 (377)
T ss_pred ceEEEEeEEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCceEEEECCEE
Confidence 3589999998763 2459999999999999999999999999999999999876 348999999987
Q ss_pred CCc-ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHH
Q 000808 756 KKQ-ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQ 834 (1275)
Q Consensus 756 ~~~-~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGe 834 (1275)
... ...++.+||++|++.++|++||.||+.|+...+ ..+..+.+++++++++.++|.+..+..+ .+|||||
T Consensus 83 i~~~~~~~r~ig~vfQ~~~lfp~ltv~eNi~~~l~~~---~~~~~~~~~~v~~~l~~l~L~~~~~~~~-----~~LSgGq 154 (377)
T PRK11607 83 LSHVPPYQRPINMMFQSYALFPHMTVEQNIAFGLKQD---KLPKAEIASRVNEMLGLVHMQEFAKRKP-----HQLSGGQ 154 (377)
T ss_pred CCCCCHHHCCEEEEeCCCccCCCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHH
Confidence 643 234577999999999999999999999876543 2344556678899999999998887765 4799999
Q ss_pred HHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhhhhheeecCcEEEEEC
Q 000808 835 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVG 913 (1275)
Q Consensus 835 rqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g 913 (1275)
||||+|||||+.+|++|+|||||++||..++..+.+.|+++.++ |.|+|++|||++ ++..++|++++|++ |+++..|
T Consensus 155 ~QRVaLARAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-ea~~laDri~vl~~-G~i~~~g 232 (377)
T PRK11607 155 RQRVALARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQE-EAMTMAGRIAIMNR-GKFVQIG 232 (377)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCEEEEEeC-CEEEEEc
Confidence 99999999999999999999999999999999999999988654 899999999986 67899999999986 7999999
Q ss_pred CCC
Q 000808 914 PLG 916 (1275)
Q Consensus 914 ~~~ 916 (1275)
++.
T Consensus 233 ~~~ 235 (377)
T PRK11607 233 EPE 235 (377)
T ss_pred CHH
Confidence 874
No 83
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.3e-37 Score=340.50 Aligned_cols=215 Identities=25% Similarity=0.367 Sum_probs=179.6
Q ss_pred EEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCCc
Q 000808 679 TFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 758 (1275)
Q Consensus 679 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 758 (1275)
+++|+++.++.. ...+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~~~---------~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~ 70 (220)
T cd03293 2 EVRNVSKTYGGG---------GGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLER--PTSGEVLVDGEPVTG 70 (220)
T ss_pred eEEEEEEEcCCC---------CcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECcc
Confidence 567888776310 011469999999999999999999999999999999999865 348999999987642
Q ss_pred ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHH
Q 000808 759 ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKRL 838 (1275)
Q Consensus 759 ~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv 838 (1275)
.++.++|++|++.+++.+|++||+.+....+ ....+..+++++++++.+++.+..++.+ ..||||||||+
T Consensus 71 --~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrl 140 (220)
T cd03293 71 --PGPDRGYVFQQDALLPWLTVLDNVALGLELQ---GVPKAEARERAEELLELVGLSGFENAYP-----HQLSGGMRQRV 140 (220)
T ss_pred --ccCcEEEEecccccccCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCChhhhhCCc-----ccCCHHHHHHH
Confidence 3567899999999888899999998875433 1223344567889999999987777665 46999999999
Q ss_pred HHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhh-CCCEEEEEecCCCHHHHHhhhhhheeec-CcEEEEECCC
Q 000808 839 TIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFESFDELFLMKR-GGQEIYVGPL 915 (1275)
Q Consensus 839 ~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~~~~l~~-gg~~~~~g~~ 915 (1275)
+|||||+.+|++++|||||+|||+.++..+.+.|+++.+ .|+|||+++|+++ ++.+.+|++++|++ +|+++..++.
T Consensus 141 ~la~al~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 141 ALARALAVDPDVLLLDEPFSALDALTREQLQEELLDIWRETGKTVLLVTHDID-EAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred HHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhCCEEEEEECCCCEEEEEEEe
Confidence 999999999999999999999999999999999999865 4899999999985 56788999999985 4899888765
No 84
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=5.4e-38 Score=358.84 Aligned_cols=203 Identities=27% Similarity=0.384 Sum_probs=177.1
Q ss_pred ccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCCc--ccccceEEEeccCCCCCCCCC
Q 000808 702 KLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ--ETFTRISGYCEQNDIHSPFVT 779 (1275)
Q Consensus 702 ~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~--~~~~~~~~~v~q~~~~~~~lt 779 (1275)
++.+|+|+||+|++||++||+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.+||++|++.+++.+|
T Consensus 5 ~~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 82 (302)
T TIGR01188 5 DFKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLR--PTSGTARVAGYDVVREPRKVRRSIGIVPQYASVDEDLT 82 (302)
T ss_pred CeeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcccCHHHHHhhcEEecCCCCCCCCCc
Confidence 3569999999999999999999999999999999999876 348999999987643 233567899999999999999
Q ss_pred HHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCC
Q 000808 780 VYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 859 (1275)
Q Consensus 780 v~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsg 859 (1275)
|+||+.+.+.++ .....+.+++++++++.+||.+..++.+ +.||||||||++||+||+.+|++|+|||||+|
T Consensus 83 v~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~lllLDEPt~g 154 (302)
T TIGR01188 83 GRENLEMMGRLY---GLPKDEAEERAEELLELFELGEAADRPV-----GTYSGGMRRRLDIAASLIHQPDVLFLDEPTTG 154 (302)
T ss_pred HHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCChhHhCCch-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcC
Confidence 999999876543 2233444567889999999998888776 46999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcEEEEECCCC
Q 000808 860 LDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVGPLG 916 (1275)
Q Consensus 860 LD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~~ 916 (1275)
||+.++..+++.|++++++|+|||++||+++ ++.+.+|++++|++ |++++.|+++
T Consensus 155 LD~~~~~~l~~~l~~~~~~g~tvi~~sH~~~-~~~~~~d~v~~l~~-G~i~~~g~~~ 209 (302)
T TIGR01188 155 LDPRTRRAIWDYIRALKEEGVTILLTTHYME-EADKLCDRIAIIDH-GRIIAEGTPE 209 (302)
T ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEECCHH
Confidence 9999999999999999877999999999986 67788999999986 7999999863
No 85
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-37 Score=338.72 Aligned_cols=209 Identities=25% Similarity=0.423 Sum_probs=177.2
Q ss_pred EEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCCc
Q 000808 679 TFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 758 (1275)
Q Consensus 679 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 758 (1275)
+++|+++.+. ++.+++|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~ 66 (210)
T cd03269 2 EVENVTKRFG-------------RVTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIIL--PDSGEVLFDGKPLDI 66 (210)
T ss_pred EEEEEEEEEC-------------CEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCCchhH
Confidence 5778887763 2459999999999999999999999999999999999865 358999999987643
Q ss_pred ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHH
Q 000808 759 ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKRL 838 (1275)
Q Consensus 759 ~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv 838 (1275)
..++.++|++|++.+++.+|++||+.+....+. ....+.++.++++++.+|+.+..++.+ ..||||||||+
T Consensus 67 -~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl 137 (210)
T cd03269 67 -AARNRIGYLPEERGLYPKMKVIDQLVYLAQLKG---LKKEEARRRIDEWLERLELSEYANKRV-----EELSKGNQQKV 137 (210)
T ss_pred -HHHccEEEeccCCcCCcCCcHHHHHHHHHHHcC---CChHHHHHHHHHHHHHcCChHHHhCcH-----hhCCHHHHHHH
Confidence 345678999999999999999999987654431 223344567889999999987776655 46999999999
Q ss_pred HHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcEEEEEC
Q 000808 839 TIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVG 913 (1275)
Q Consensus 839 ~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g 913 (1275)
+||++|+.+|++++|||||+|||+.++..+.+.|+++.++|+|||+++|+++ ++.+.+|++++|.+ |++++.|
T Consensus 138 ~la~al~~~p~~lllDEP~~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-g~i~~~~ 210 (210)
T cd03269 138 QFIAAVIHDPELLILDEPFSGLDPVNVELLKDVIRELARAGKTVILSTHQME-LVEELCDRVLLLNK-GRAVLYG 210 (210)
T ss_pred HHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHH-HHHHhhhEEEEEeC-CEEEecC
Confidence 9999999999999999999999999999999999998777899999999975 46678999999986 7877654
No 86
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1e-37 Score=341.28 Aligned_cols=213 Identities=28% Similarity=0.372 Sum_probs=180.4
Q ss_pred EEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCC
Q 000808 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1275)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 757 (1275)
++++|+++++. ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 1 i~~~~~~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~ 65 (220)
T cd03265 1 IEVENLVKKYG-------------DFEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLK--PTSGRATVAGHDVV 65 (220)
T ss_pred CEEEEEEEEEC-------------CEEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEecC
Confidence 35778887763 2469999999999999999999999999999999999865 34899999997653
Q ss_pred c--ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHH
Q 000808 758 Q--ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQR 835 (1275)
Q Consensus 758 ~--~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGer 835 (1275)
. ...++.++|++|++.+++.+||+|++.+....+ ....++.+++++++++.+++.+..++.+ ..||||||
T Consensus 66 ~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~ 137 (220)
T cd03265 66 REPREVRRRIGIVFQDLSVDDELTGWENLYIHARLY---GVPGAERRERIDELLDFVGLLEAADRLV-----KTYSGGMR 137 (220)
T ss_pred cChHHHhhcEEEecCCccccccCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCHHHhhCCh-----hhCCHHHH
Confidence 2 223457899999999999999999998875443 1223344567889999999988777765 46999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhhhhheeecCcEEEEECC
Q 000808 836 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVGP 914 (1275)
Q Consensus 836 qrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~ 914 (1275)
||++||+||+.+|++++|||||+|||+.++..+.+.|+++.++ |+|||+++|+++ ++.+.+|++++|.+ |+++..|+
T Consensus 138 qr~~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~-~~~~~~d~i~~l~~-G~i~~~~~ 215 (220)
T cd03265 138 RRLEIARSLVHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYME-EAEQLCDRVAIIDH-GRIIAEGT 215 (220)
T ss_pred HHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEEeCC
Confidence 9999999999999999999999999999999999999998776 899999999986 56778999999986 78988887
Q ss_pred C
Q 000808 915 L 915 (1275)
Q Consensus 915 ~ 915 (1275)
+
T Consensus 216 ~ 216 (220)
T cd03265 216 P 216 (220)
T ss_pred h
Confidence 5
No 87
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=1.2e-36 Score=374.55 Aligned_cols=218 Identities=28% Similarity=0.435 Sum_probs=179.8
Q ss_pred CCCCcEEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEE
Q 000808 672 PFEPHSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITI 751 (1275)
Q Consensus 672 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~ 751 (1275)
|.-...++++|++|+|+. ++..+|+|+|++|+|||.+||+|+||||||||+|+|.|... +.+|+|.+
T Consensus 466 ~~~~g~I~~~nvsf~y~~-----------~~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~--p~~G~I~~ 532 (709)
T COG2274 466 PKLQGEIEFENVSFRYGP-----------DDPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYK--PQQGRILL 532 (709)
T ss_pred cccCceEEEEEEEEEeCC-----------CCcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEE
Confidence 444578999999999963 22369999999999999999999999999999999999876 45899999
Q ss_pred cCccCCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCC-------Ccccccc
Q 000808 752 SGYPKKQ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVEL-------NPLRQSL 821 (1275)
Q Consensus 752 ~g~~~~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l-------~~~~~~~ 821 (1275)
||.+... ..+|+.+|||+|++.++. -|++||+.++. | +.+.++ +.++++..|. ..-.++.
T Consensus 533 dg~dl~~i~~~~lR~~ig~V~Q~~~Lf~-gSI~eNi~l~~----p-~~~~e~----i~~A~~~ag~~~fI~~lP~gy~t~ 602 (709)
T COG2274 533 DGVDLNDIDLASLRRQVGYVLQDPFLFS-GSIRENIALGN----P-EATDEE----IIEAAQLAGAHEFIENLPMGYDTP 602 (709)
T ss_pred CCEeHHhcCHHHHHhheeEEcccchhhc-CcHHHHHhcCC----C-CCCHHH----HHHHHHHhCcHHHHHhcccccccc
Confidence 9998653 567899999999998875 69999998652 2 223222 3344443333 2334666
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhh
Q 000808 822 VGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELF 901 (1275)
Q Consensus 822 ~~~~~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~ 901 (1275)
+|.. ..+||||||||++|||||+++|+||+||||||+||+++.+.|.+.|+++. +|+|+|+++|+++ ....+|+|+
T Consensus 603 v~E~-G~~LSGGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~-~~~T~I~IaHRl~--ti~~adrIi 678 (709)
T COG2274 603 VGEG-GANLSGGQRQRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQIL-QGRTVIIIAHRLS--TIRSADRII 678 (709)
T ss_pred cccC-CCCCCHHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHh-cCCeEEEEEccch--HhhhccEEE
Confidence 6643 45899999999999999999999999999999999999999999999976 4799999999975 688999999
Q ss_pred eeecCcEEEEECCCCc
Q 000808 902 LMKRGGQEIYVGPLGR 917 (1275)
Q Consensus 902 ~l~~gg~~~~~g~~~~ 917 (1275)
+|++ |+++..|+.++
T Consensus 679 Vl~~-Gkiv~~gs~~e 693 (709)
T COG2274 679 VLDQ-GKIVEQGSHEE 693 (709)
T ss_pred EccC-CceeccCCHHH
Confidence 9986 89999999743
No 88
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=1.4e-37 Score=355.49 Aligned_cols=215 Identities=27% Similarity=0.378 Sum_probs=183.9
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 756 (1275)
.++++|+++++. ++.+|+|+||++++||++||+||||||||||+++|+|..++ .+|+|.++|.+.
T Consensus 4 ~i~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p--~~G~i~~~g~~~ 68 (303)
T TIGR01288 4 AIDLVGVSKSYG-------------DKVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISP--DRGKITVLGEPV 68 (303)
T ss_pred EEEEEeEEEEeC-------------CeEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEC
Confidence 478899998773 24599999999999999999999999999999999998653 489999999875
Q ss_pred Cc--ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHH
Q 000808 757 KQ--ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQ 834 (1275)
Q Consensus 757 ~~--~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGe 834 (1275)
.. ...++.+||++|++.+++.+||+||+.+.+... ..+..+.+++++++++.+++.+..++.+ +.|||||
T Consensus 69 ~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~ll~~~~l~~~~~~~~-----~~LSgG~ 140 (303)
T TIGR01288 69 PSRARLARVAIGVVPQFDNLDPEFTVRENLLVFGRYF---GMSTREIEAVIPSLLEFARLESKADVRV-----ALLSGGM 140 (303)
T ss_pred cccHHHHhhcEEEEeccccCCcCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHCCChhHhcCch-----hhCCHHH
Confidence 32 223567999999999999999999998755432 1233344456788999999988877776 4699999
Q ss_pred HHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcEEEEECC
Q 000808 835 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVGP 914 (1275)
Q Consensus 835 rqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~ 914 (1275)
|||++||+||+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|++++|++ |++++.|+
T Consensus 141 ~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~-~~~~~~d~i~~l~~-G~i~~~g~ 218 (303)
T TIGR01288 141 KRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFME-EAERLCDRLCVLES-GRKIAEGR 218 (303)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 99999999999999999999999999999999999999999877999999999986 57788999999986 79999998
Q ss_pred CC
Q 000808 915 LG 916 (1275)
Q Consensus 915 ~~ 916 (1275)
++
T Consensus 219 ~~ 220 (303)
T TIGR01288 219 PH 220 (303)
T ss_pred HH
Confidence 63
No 89
>COG4152 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=5e-38 Score=320.86 Aligned_cols=212 Identities=25% Similarity=0.406 Sum_probs=192.4
Q ss_pred EEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCC
Q 000808 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1275)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 757 (1275)
+++++|+.++ +++.+++|+||.++||+++|++|||||||||++++|.|... +.+|.|.++|.+.+
T Consensus 3 L~ie~vtK~F-------------g~k~av~~isf~v~~G~i~GllG~NGAGKTTtfRmILglle--~~~G~I~~~g~~~~ 67 (300)
T COG4152 3 LEIEGVTKSF-------------GDKKAVDNISFEVPPGEIFGLLGPNGAGKTTTFRMILGLLE--PTEGEITWNGGPLS 67 (300)
T ss_pred eEEecchhcc-------------CceeeecceeeeecCCeEEEeecCCCCCccchHHHHhccCC--ccCceEEEcCcchh
Confidence 5677777554 46789999999999999999999999999999999999876 45899999999877
Q ss_pred cccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHH
Q 000808 758 QETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKR 837 (1275)
Q Consensus 758 ~~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqr 837 (1275)
.. .+.++||.|.+.-+++.+||.|.|.|.|.++ .++.++.++.++.+|+.+++......++ +.||.|++|+
T Consensus 68 ~~-~~~rIGyLPEERGLy~k~tv~dql~yla~Lk---Gm~~~e~~~~~~~wLer~~i~~~~~~kI-----k~LSKGnqQK 138 (300)
T COG4152 68 QE-IKNRIGYLPEERGLYPKMTVEDQLKYLAELK---GMPKAEIQKKLQAWLERLEIVGKKTKKI-----KELSKGNQQK 138 (300)
T ss_pred hh-hhhhcccChhhhccCccCcHHHHHHHHHHhc---CCcHHHHHHHHHHHHHhccccccccchH-----HHhhhhhhHH
Confidence 53 3456899999999999999999999999887 5667788888999999999999888877 5799999999
Q ss_pred HHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcEEEEECCC
Q 000808 838 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVGPL 915 (1275)
Q Consensus 838 v~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 915 (1275)
+.+-.+++++|++++||||+|||||.+.+.+.+.+.+++++|.|||+++|+.+ .+-++||++++|++ |+.|.+|+.
T Consensus 139 IQfisaviHePeLlILDEPFSGLDPVN~elLk~~I~~lk~~GatIifSsH~Me-~vEeLCD~llmL~k-G~~V~~G~v 214 (300)
T COG4152 139 IQFISAVIHEPELLILDEPFSGLDPVNVELLKDAIFELKEEGATIIFSSHRME-HVEELCDRLLMLKK-GQTVLYGTV 214 (300)
T ss_pred HHHHHHHhcCCCEEEecCCccCCChhhHHHHHHHHHHHHhcCCEEEEecchHH-HHHHHhhhhheecC-CceEEeccH
Confidence 99999999999999999999999999999999999999999999999999986 68899999999996 789999997
No 90
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=1.5e-37 Score=338.42 Aligned_cols=210 Identities=26% Similarity=0.396 Sum_probs=177.5
Q ss_pred EEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCCc
Q 000808 679 TFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 758 (1275)
Q Consensus 679 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 758 (1275)
+++|+++.++ ++++|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~v~~~g~~~~~ 66 (213)
T cd03301 2 ELENVTKRFG-------------NVTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEE--PTSGRIYIGGRDVTD 66 (213)
T ss_pred EEEeeEEEEC-------------CeeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECCc
Confidence 5778887763 2369999999999999999999999999999999999865 348999999987643
Q ss_pred c-cccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHH
Q 000808 759 E-TFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKR 837 (1275)
Q Consensus 759 ~-~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqr 837 (1275)
. ..++.++|++|++.+++.+|++||+.+....+ ....++.+++++++++.+|+.+..+..+ +.||||||||
T Consensus 67 ~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qr 138 (213)
T cd03301 67 LPPKDRDIAMVFQNYALYPHMTVYDNIAFGLKLR---KVPKDEIDERVREVAELLQIEHLLDRKP-----KQLSGGQRQR 138 (213)
T ss_pred CCcccceEEEEecChhhccCCCHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCHHHHhCCh-----hhCCHHHHHH
Confidence 1 22456999999998888999999998765432 1233444567889999999988777765 4699999999
Q ss_pred HHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhhhhheeecCcEEEEEC
Q 000808 838 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVG 913 (1275)
Q Consensus 838 v~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g 913 (1275)
++|||+|+.+|++++|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|.+ |+++++|
T Consensus 139 ~~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~-g~~~~~g 213 (213)
T cd03301 139 VALGRAIVREPKVFLMDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQV-EAMTMADRIAVMND-GQIQQIG 213 (213)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEEEEEC-CEEEecC
Confidence 99999999999999999999999999999999999998764 899999999975 56778999999986 7888765
No 91
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=1e-37 Score=359.43 Aligned_cols=204 Identities=24% Similarity=0.294 Sum_probs=179.0
Q ss_pred cccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCCcc---cc----cceEEEeccCCC
Q 000808 701 DKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQE---TF----TRISGYCEQNDI 773 (1275)
Q Consensus 701 ~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~~---~~----~~~~~~v~q~~~ 773 (1275)
+.+.+|+|+||+|++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++... .+ ++.++||+|++.
T Consensus 4 ~~~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~--p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~ 81 (363)
T TIGR01186 4 GGKKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIE--PTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFA 81 (363)
T ss_pred CCceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCC--CCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCc
Confidence 34569999999999999999999999999999999999876 3589999999886532 12 567999999999
Q ss_pred CCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEE
Q 000808 774 HSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFM 853 (1275)
Q Consensus 774 ~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~~l~~~p~illl 853 (1275)
++|.+||+||+.|..... ..+.++.++++.++++.+||.+..++.+ ..|||||||||+|||||+.+|+||+|
T Consensus 82 l~~~~TV~eNi~~~~~~~---~~~~~~~~~~~~~~l~~vgL~~~~~~~p-----~~LSGGq~QRV~lARAL~~~p~iLLl 153 (363)
T TIGR01186 82 LFPHMTILQNTSLGPELL---GWPEQERKEKALELLKLVGLEEYEHRYP-----DELSGGMQQRVGLARALAAEPDILLM 153 (363)
T ss_pred CCCCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHHhcCCchhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 999999999999876543 2345566778899999999988877775 46999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhhhhheeecCcEEEEECCCC
Q 000808 854 DEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVGPLG 916 (1275)
Q Consensus 854 DEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~~ 916 (1275)
||||++||+.++..+.+.++++.++ |+|||++||+++ ++...+|++++|.+ |+++..|+++
T Consensus 154 DEP~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~-ea~~~~drI~vl~~-G~iv~~g~~~ 215 (363)
T TIGR01186 154 DEAFSALDPLIRDSMQDELKKLQATLQKTIVFITHDLD-EAIRIGDRIVIMKA-GEIVQVGTPD 215 (363)
T ss_pred eCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEeeCCHH
Confidence 9999999999999999999998754 899999999986 57788999999985 7999999864
No 92
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-37 Score=362.38 Aligned_cols=215 Identities=25% Similarity=0.361 Sum_probs=185.7
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 756 (1275)
.++++|+++++. ++.+|+|+|+++++||+++|+|||||||||||++|+|..++ .+|+|.++|.+.
T Consensus 3 ~l~i~~l~~~~~-------------~~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p--~~G~I~~~g~~i 67 (369)
T PRK11000 3 SVTLRNVTKAYG-------------DVVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDI--TSGDLFIGEKRM 67 (369)
T ss_pred EEEEEEEEEEeC-------------CeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCC--CceEEEECCEEC
Confidence 478899988773 24599999999999999999999999999999999998763 489999999876
Q ss_pred Cc-ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHH
Q 000808 757 KQ-ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQR 835 (1275)
Q Consensus 757 ~~-~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGer 835 (1275)
.. ...++.+||++|+..+++.+||+||+.|....+ ..+..+.+++++++++.+||.+..++.+ ..||||||
T Consensus 68 ~~~~~~~~~i~~v~Q~~~l~~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~lgL~~~~~~~~-----~~LSgGq~ 139 (369)
T PRK11000 68 NDVPPAERGVGMVFQSYALYPHLSVAENMSFGLKLA---GAKKEEINQRVNQVAEVLQLAHLLDRKP-----KALSGGQR 139 (369)
T ss_pred CCCCHhHCCEEEEeCCcccCCCCCHHHHHHhHHhhc---CCCHHHHHHHHHHHHHHcCChhhhcCCh-----hhCCHHHH
Confidence 43 123467999999999999999999999876543 1234455667899999999988877765 47999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhhhhheeecCcEEEEECC
Q 000808 836 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVGP 914 (1275)
Q Consensus 836 qrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~ 914 (1275)
|||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|+|++||+++ ++...+|++++|++ |+++..|+
T Consensus 140 QRvaLAraL~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~-~~~~~~d~i~vl~~-G~i~~~g~ 217 (369)
T PRK11000 140 QRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQV-EAMTLADKIVVLDA-GRVAQVGK 217 (369)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999998765 899999999986 67789999999996 79999998
Q ss_pred CC
Q 000808 915 LG 916 (1275)
Q Consensus 915 ~~ 916 (1275)
++
T Consensus 218 ~~ 219 (369)
T PRK11000 218 PL 219 (369)
T ss_pred HH
Confidence 74
No 93
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-37 Score=358.76 Aligned_cols=218 Identities=22% Similarity=0.302 Sum_probs=184.4
Q ss_pred EEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCC
Q 000808 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1275)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 757 (1275)
++++|++++++.. ..++.+|+|+||+|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 i~i~~l~~~y~~~---------~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~--p~~G~I~~~g~~i~ 70 (343)
T PRK11153 2 IELKNISKVFPQG---------GRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLER--PTSGRVLVDGQDLT 70 (343)
T ss_pred EEEEeEEEEeCCC---------CCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCceEEEECCEECC
Confidence 5788998887410 013469999999999999999999999999999999999876 34899999998764
Q ss_pred cc------cccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCC
Q 000808 758 QE------TFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLS 831 (1275)
Q Consensus 758 ~~------~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lS 831 (1275)
.. ..++.+||++|++.+++.+||+||+.+....+ ..+.++.+++++++++.+||.+..++.+ +.||
T Consensus 71 ~~~~~~~~~~~~~ig~v~q~~~l~~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LS 142 (343)
T PRK11153 71 ALSEKELRKARRQIGMIFQHFNLLSSRTVFDNVALPLELA---GTPKAEIKARVTELLELVGLSDKADRYP-----AQLS 142 (343)
T ss_pred cCCHHHHHHHhcCEEEEeCCCccCCCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhhCCh-----hhCC
Confidence 31 13567999999999999999999998875443 2234445567889999999988777765 4799
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhhhhheeecCcEEE
Q 000808 832 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDELFLMKRGGQEI 910 (1275)
Q Consensus 832 gGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~ 910 (1275)
||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||++||+++ ++.+.+|++++|++ |+++
T Consensus 143 gGq~qRv~lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~-~i~~~~d~v~~l~~-G~i~ 220 (343)
T PRK11153 143 GGQKQRVAIARALASNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMD-VVKRICDRVAVIDA-GRLV 220 (343)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999998765 899999999986 56778999999986 7999
Q ss_pred EECCCC
Q 000808 911 YVGPLG 916 (1275)
Q Consensus 911 ~~g~~~ 916 (1275)
+.|++.
T Consensus 221 ~~g~~~ 226 (343)
T PRK11153 221 EQGTVS 226 (343)
T ss_pred EEcCHH
Confidence 999863
No 94
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.3e-38 Score=334.08 Aligned_cols=193 Identities=26% Similarity=0.415 Sum_probs=164.6
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCc---cCCCcc-ccceEEEeccccccCCCCCHHHHHHHHHhccC
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGH---GMDEFV-PQRTAAYISQHDVHIGEMTVRETLAFSARCQG 76 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~---~~~~~~-~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~ 76 (1275)
++|++|||||||||||++|+|+..|+ +|.|.+||+ |.++.. ..|.+|||+|+..+|+.+||.|||.|+.+++.
T Consensus 30 ~vaLlGpSGaGKsTlLRiIAGLe~p~---~G~I~~~~~~l~D~~~~~~~~R~VGfvFQ~YALF~HmtVa~NIAFGl~~~~ 106 (345)
T COG1118 30 LVALLGPSGAGKSTLLRIIAGLETPD---AGRIRLNGRVLFDVSNLAVRDRKVGFVFQHYALFPHMTVADNIAFGLKVRK 106 (345)
T ss_pred EEEEECCCCCcHHHHHHHHhCcCCCC---CceEEECCEeccchhccchhhcceeEEEechhhcccchHHhhhhhcccccc
Confidence 47999999999999999999999998 999999999 665533 34789999999999999999999999987652
Q ss_pred CCCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhhHH
Q 000808 77 VGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTG 156 (1275)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA 156 (1275)
. ++.+ .+.+..++++|+.+.|+. ++++++..|||||||||++|
T Consensus 107 ~-----~p~~---------------------------~~~r~rv~elL~lvqL~~-----la~ryP~QLSGGQrQRVALA 149 (345)
T COG1118 107 E-----RPSE---------------------------AEIRARVEELLRLVQLEG-----LADRYPAQLSGGQRQRVALA 149 (345)
T ss_pred c-----CCCh---------------------------hhHHHHHHHHHHHhcccc-----hhhcCchhcChHHHHHHHHH
Confidence 1 1111 122334677888888865 45678899999999999999
Q ss_pred HHHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhhHH
Q 000808 157 EMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVL 234 (1275)
Q Consensus 157 ~al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~~~ 234 (1275)
|||+..|++||||||+++||++.+.++...|++.....+ .+.+.++|+.+|++++||||++|++|+|...|+++++.
T Consensus 150 RALA~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~-~ttvfVTHD~eea~~ladrvvvl~~G~Ieqvg~p~ev~ 226 (345)
T COG1118 150 RALAVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRLG-VTTVFVTHDQEEALELADRVVVLNQGRIEQVGPPDEVY 226 (345)
T ss_pred HHhhcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhhC-ceEEEEeCCHHHHHhhcceEEEecCCeeeeeCCHHHHh
Confidence 999999999999999999999999999999999765444 44555899999999999999999999999999999984
No 95
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.1e-37 Score=341.76 Aligned_cols=217 Identities=27% Similarity=0.392 Sum_probs=181.2
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 756 (1275)
.++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 2 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~ 66 (239)
T cd03296 2 SIEVRNVSKRFG-------------DFVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLER--PDSGTILFGGEDA 66 (239)
T ss_pred EEEEEeEEEEEC-------------CEEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEC
Confidence 367889988773 2459999999999999999999999999999999999865 3489999999876
Q ss_pred Ccc-cccceEEEeccCCCCCCCCCHHHHHHHHHhccCC-CCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHH
Q 000808 757 KQE-TFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLP-PEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQ 834 (1275)
Q Consensus 757 ~~~-~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~-~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGe 834 (1275)
... ..++.++|++|++.+++.+||+||+.+....+.. ......+.+++++++++.+++.+..++.+ ..|||||
T Consensus 67 ~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~ 141 (239)
T cd03296 67 TDVPVQERNVGFVFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIRAKVHELLKLVQLDWLADRYP-----AQLSGGQ 141 (239)
T ss_pred CcCCccccceEEEecCCcccCCCCHHHHHhhhhhhccccccCCHHHHHHHHHHHHHHcCChhhhhcCh-----hhCCHHH
Confidence 431 2245689999999998899999999876543211 00122334456788999999987777665 4699999
Q ss_pred HHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhhhhheeecCcEEEEEC
Q 000808 835 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVG 913 (1275)
Q Consensus 835 rqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g 913 (1275)
|||++|||||+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++...+|++++|++ |++++.|
T Consensus 142 ~qrl~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~ 219 (239)
T cd03296 142 RQRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQE-EALEVADRVVVMNK-GRIEQVG 219 (239)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEEec
Confidence 99999999999999999999999999999999999999998765 899999999985 56788999999985 7899998
Q ss_pred CC
Q 000808 914 PL 915 (1275)
Q Consensus 914 ~~ 915 (1275)
++
T Consensus 220 ~~ 221 (239)
T cd03296 220 TP 221 (239)
T ss_pred CH
Confidence 76
No 96
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=1.7e-37 Score=361.92 Aligned_cols=219 Identities=26% Similarity=0.357 Sum_probs=185.7
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 756 (1275)
-++++|+++++. ++.+|+|+||++++||+++|+||||||||||||+|+|..+ +.+|+|.++|.+.
T Consensus 3 ~L~~~nls~~y~-------------~~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~--p~sG~I~l~G~~i 67 (402)
T PRK09536 3 MIDVSDLSVEFG-------------DTTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLT--PTAGTVLVAGDDV 67 (402)
T ss_pred eEEEeeEEEEEC-------------CEEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCC--CCCcEEEECCEEc
Confidence 378899988773 3469999999999999999999999999999999999876 3489999999876
Q ss_pred Cc---ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCC-CCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCH
Q 000808 757 KQ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLP-PEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLST 832 (1275)
Q Consensus 757 ~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~-~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSg 832 (1275)
.. ...++.+||++|++.+++.+||+|++.++...... .....++.+++++++++.+|+.+..++.+ +.|||
T Consensus 68 ~~~~~~~~~~~ig~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~~~~~~-----~~LSg 142 (402)
T PRK09536 68 EALSARAASRRVASVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQFADRPV-----TSLSG 142 (402)
T ss_pred CcCCHHHHhcceEEEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCchhhcCCh-----hhCCH
Confidence 43 23456799999999998999999999875321100 01112334567899999999998888776 47999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcEEEEE
Q 000808 833 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYV 912 (1275)
Q Consensus 833 Gerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~ 912 (1275)
|||||+.|||||+++|++|+|||||+|||+.++..+++.|++++++|+|||+++|+++ ++.+.+|++++|++ |++++.
T Consensus 143 GerQRv~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~-~~~~~adrii~l~~-G~iv~~ 220 (402)
T PRK09536 143 GERQRVLLARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLD-LAARYCDELVLLAD-GRVRAA 220 (402)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEe
Confidence 9999999999999999999999999999999999999999999877899999999986 57789999999986 799999
Q ss_pred CCCCc
Q 000808 913 GPLGR 917 (1275)
Q Consensus 913 g~~~~ 917 (1275)
|++++
T Consensus 221 G~~~e 225 (402)
T PRK09536 221 GPPAD 225 (402)
T ss_pred cCHHH
Confidence 98753
No 97
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=2.4e-37 Score=342.61 Aligned_cols=215 Identities=27% Similarity=0.354 Sum_probs=179.5
Q ss_pred EEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCCc
Q 000808 679 TFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 758 (1275)
Q Consensus 679 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 758 (1275)
+++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~ 66 (236)
T cd03219 2 EVRGLTKRFG-------------GLVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLR--PTSGSVLFDGEDITG 66 (236)
T ss_pred eeeeeEEEEC-------------CEEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCC--CCCceEEECCEECCC
Confidence 4678877763 2359999999999999999999999999999999999865 348999999987643
Q ss_pred c---c-ccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCC-------CCHHHHHHHHHHHHHHcCCCccccccccCCCC
Q 000808 759 E---T-FTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPE-------VDSETQKMFIEEIMELVELNPLRQSLVGLPGE 827 (1275)
Q Consensus 759 ~---~-~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~-------~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~ 827 (1275)
. . .++.++|++|++.+++.+||+||+.+......... ....+.++.++++++.+|+.+..++.+
T Consensus 67 ~~~~~~~~~~i~~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~----- 141 (236)
T cd03219 67 LPPHEIARLGIGRTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREARERAEELLERVGLADLADRPA----- 141 (236)
T ss_pred CCHHHHHhcCEEEEecccccccCCCHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHcCccchhhCCh-----
Confidence 1 1 23458999999999999999999988754321110 113344567889999999987777665
Q ss_pred CCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCc
Q 000808 828 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGG 907 (1275)
Q Consensus 828 ~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg 907 (1275)
+.||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|++++|++ |
T Consensus 142 ~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~-~~~~~~d~i~~l~~-G 219 (236)
T cd03219 142 GELSYGQQRRLEIARALATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMD-VVMSLADRVTVLDQ-G 219 (236)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEEEEeC-C
Confidence 479999999999999999999999999999999999999999999998777899999999986 56788999999986 7
Q ss_pred EEEEECCC
Q 000808 908 QEIYVGPL 915 (1275)
Q Consensus 908 ~~~~~g~~ 915 (1275)
+++..|++
T Consensus 220 ~i~~~~~~ 227 (236)
T cd03219 220 RVIAEGTP 227 (236)
T ss_pred EEEeecCH
Confidence 89998876
No 98
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.7e-38 Score=350.96 Aligned_cols=203 Identities=29% Similarity=0.413 Sum_probs=174.1
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCccc-cceEEEeccccccCCCCCHHHHHHHHHhccCCCC
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFVP-QRTAAYISQHDVHIGEMTVRETLAFSARCQGVGS 79 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~~~-~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~ 79 (1275)
+++|+|||||||||||++|+|+.+|+ +|+|.++|+++++..+ +|.+++|+|+..++|.+||+||+.|+.++++..
T Consensus 31 f~vllGPSGcGKSTlLr~IAGLe~~~---~G~I~i~g~~vt~l~P~~R~iamVFQ~yALyPhmtV~~Niaf~Lk~~~~~- 106 (338)
T COG3839 31 FVVLLGPSGCGKSTLLRMIAGLEEPT---SGEILIDGRDVTDLPPEKRGIAMVFQNYALYPHMTVYENIAFGLKLRGVP- 106 (338)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCChhHCCEEEEeCCccccCCCcHHHHhhhhhhhCCCc-
Confidence 36899999999999999999999998 9999999999988655 488999999999999999999999998876421
Q ss_pred cchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhhHHHHH
Q 000808 80 RYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEMM 159 (1275)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~al 159 (1275)
+++.+.+++++.+.|+|++..| +.+.+|||||||||+|||||
T Consensus 107 ---------------------------------k~ei~~rV~eva~~L~l~~lL~-----r~P~~LSGGQrQRVAlaRAl 148 (338)
T COG3839 107 ---------------------------------KAEIDKRVKEVAKLLGLEHLLN-----RKPLQLSGGQRQRVALARAL 148 (338)
T ss_pred ---------------------------------hHHHHHHHHHHHHHcCChhHHh-----cCcccCChhhHHHHHHHHHH
Confidence 1223345777889999987665 56778999999999999999
Q ss_pred hcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhhHHHHHHh
Q 000808 160 VGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVLDFFES 239 (1275)
Q Consensus 160 ~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~~~~~f~~ 239 (1275)
+.+|+++|||||+|+||+..+.++...++++.+.. +++++.+||+..|+..++|||++|++|++...|++.++.+
T Consensus 149 Vr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l-~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q~g~p~ely~---- 223 (338)
T COG3839 149 VRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERL-GTTTIYVTHDQVEAMTLADRIVVMNDGRIQQVGTPLELYE---- 223 (338)
T ss_pred hcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhc-CCcEEEEcCCHHHHHhhCCEEEEEeCCeeeecCChHHHhh----
Confidence 99999999999999999999999999999865544 5666678999999999999999999999999999999843
Q ss_pred CCCCCCCCCChhhHH
Q 000808 240 MGFKCPERKGVADFL 254 (1275)
Q Consensus 240 ~G~~~p~~~~~ad~l 254 (1275)
.|.+.-.|+|+
T Consensus 224 ----~P~n~fVA~Fi 234 (338)
T COG3839 224 ----RPANLFVAGFI 234 (338)
T ss_pred ----Cccchhhhhhc
Confidence 45544455554
No 99
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=2.2e-37 Score=338.55 Aligned_cols=215 Identities=28% Similarity=0.428 Sum_probs=179.5
Q ss_pred EEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCC
Q 000808 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1275)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 757 (1275)
++++|+++.++.. ....++|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~v~~~~~~~---------~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 70 (218)
T cd03266 2 ITADALTKRFRDV---------KKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLE--PDAGFATVDGFDVV 70 (218)
T ss_pred eEEEEEEEecCCC---------CccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCCceEEECCEEcc
Confidence 5678888876311 011269999999999999999999999999999999999865 34899999998764
Q ss_pred c--ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHH
Q 000808 758 Q--ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQR 835 (1275)
Q Consensus 758 ~--~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGer 835 (1275)
. ..+++.++|++|++.+++.+||+||+.+....+ .....+.+++++++++.+|+.+..+..+ +.||||||
T Consensus 71 ~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~ 142 (218)
T cd03266 71 KEPAEARRRLGFVSDSTGLYDRLTARENLEYFAGLY---GLKGDELTARLEELADRLGMEELLDRRV-----GGFSTGMR 142 (218)
T ss_pred cCHHHHHhhEEEecCCcccCcCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCHHHHhhhh-----hhcCHHHH
Confidence 3 234567999999999999999999998765433 1233445567889999999988777765 46999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcEEEEEC
Q 000808 836 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVG 913 (1275)
Q Consensus 836 qrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g 913 (1275)
||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|+++ ++.+.+|++++|++ |+++..|
T Consensus 143 qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~i~~l~~-G~i~~~~ 218 (218)
T cd03266 143 QKVAIARALVHDPPVLLLDEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQ-EVERLCDRVVVLHR-GRVVYEG 218 (218)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEeecC
Confidence 9999999999999999999999999999999999999998777899999999985 56788999999986 6777654
No 100
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=3e-37 Score=352.14 Aligned_cols=213 Identities=24% Similarity=0.366 Sum_probs=184.7
Q ss_pred EEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCC
Q 000808 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1275)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 757 (1275)
++++|+++++. ++.+|+|+||++++||++||+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~--~~~G~i~i~g~~~~ 67 (301)
T TIGR03522 3 IRVSSLTKLYG-------------TQNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLP--PDSGSVQVCGEDVL 67 (301)
T ss_pred EEEEEEEEEEC-------------CEEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcc
Confidence 67889988773 2469999999999999999999999999999999999866 34899999998764
Q ss_pred c--ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHH
Q 000808 758 Q--ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQR 835 (1275)
Q Consensus 758 ~--~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGer 835 (1275)
. ...++.+||++|++.+++.+|+.||+.+.+.++. .+.++..++++++++.+||.+..++.+ +.||||||
T Consensus 68 ~~~~~~~~~ig~~~q~~~l~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~ 139 (301)
T TIGR03522 68 QNPKEVQRNIGYLPEHNPLYLDMYVREYLQFIAGIYG---MKGQLLKQRVEEMIELVGLRPEQHKKI-----GQLSKGYR 139 (301)
T ss_pred cChHHHHhceEEecCCCCCCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHCCCchHhcCch-----hhCCHHHH
Confidence 3 2345679999999999999999999998775542 233444566889999999998888776 46999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcEEEEECCC
Q 000808 836 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVGPL 915 (1275)
Q Consensus 836 qrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 915 (1275)
||++||+||+++|++|+|||||+|||+.++..+++.|+++++ ++|||++||+++ ++.+.+|++++|++ |++++.|+.
T Consensus 140 qrv~la~al~~~p~lliLDEPt~gLD~~~~~~l~~~l~~~~~-~~tiii~sH~l~-~~~~~~d~i~~l~~-G~i~~~g~~ 216 (301)
T TIGR03522 140 QRVGLAQALIHDPKVLILDEPTTGLDPNQLVEIRNVIKNIGK-DKTIILSTHIMQ-EVEAICDRVIIINK-GKIVADKKL 216 (301)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHhcC-CCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 999999999999999999999999999999999999999865 799999999986 67889999999986 799999987
Q ss_pred C
Q 000808 916 G 916 (1275)
Q Consensus 916 ~ 916 (1275)
+
T Consensus 217 ~ 217 (301)
T TIGR03522 217 D 217 (301)
T ss_pred H
Confidence 4
No 101
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=3e-37 Score=340.86 Aligned_cols=213 Identities=26% Similarity=0.360 Sum_probs=179.9
Q ss_pred EEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCCc
Q 000808 679 TFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 758 (1275)
Q Consensus 679 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 758 (1275)
+++|+++.++ ++.+|+|+||++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~ 66 (232)
T cd03218 2 RAENLSKRYG-------------KRKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVK--PDSGKILLDGQDITK 66 (232)
T ss_pred eEEEEEEEeC-------------CEEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEeccc
Confidence 5778887763 2459999999999999999999999999999999999865 347999999987532
Q ss_pred c---c-ccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHH
Q 000808 759 E---T-FTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQ 834 (1275)
Q Consensus 759 ~---~-~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGe 834 (1275)
. . .++.++|++|++.+++.+|++||+.+....+. ....+.+++++++++.+++.+..++.+ +.|||||
T Consensus 67 ~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~ 138 (232)
T cd03218 67 LPMHKRARLGIGYLPQEASIFRKLTVEENILAVLEIRG---LSKKEREEKLEELLEEFHITHLRKSKA-----SSLSGGE 138 (232)
T ss_pred CCHhHHHhccEEEecCCccccccCcHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCCHHH
Confidence 1 1 23468999999999999999999987643321 223344556789999999987777665 4699999
Q ss_pred HHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcEEEEECC
Q 000808 835 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVGP 914 (1275)
Q Consensus 835 rqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~ 914 (1275)
|||++||+||+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|+++ ++.+.+|++++|++ |+++..|+
T Consensus 139 ~qrl~la~al~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~ 216 (232)
T cd03218 139 RRRVEIARALATNPKFLLLDEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVR-ETLSITDRAYIIYE-GKVLAEGT 216 (232)
T ss_pred HHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEEEeC
Confidence 99999999999999999999999999999999999999998777899999999986 67889999999985 78998887
Q ss_pred CC
Q 000808 915 LG 916 (1275)
Q Consensus 915 ~~ 916 (1275)
.+
T Consensus 217 ~~ 218 (232)
T cd03218 217 PE 218 (232)
T ss_pred HH
Confidence 63
No 102
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=2.3e-37 Score=340.41 Aligned_cols=214 Identities=23% Similarity=0.286 Sum_probs=177.4
Q ss_pred EEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCC-----CCceEEEEEEEcC
Q 000808 679 TFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRK-----TGGYITGNITISG 753 (1275)
Q Consensus 679 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~-----~~~~~~G~i~~~g 753 (1275)
+++|++++++ ++.+|+|+|+++++||+++|+||||||||||+++|+|.. + +.+|+|.++|
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~--~~~G~i~~~g 66 (227)
T cd03260 2 ELRDLNVYYG-------------DKHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGA--PDEGEVLLDG 66 (227)
T ss_pred EEEEEEEEcC-------------CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCC--CCCeEEEECC
Confidence 5778887763 236999999999999999999999999999999999976 4 4589999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCC
Q 000808 754 YPKKQ-----ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGES 828 (1275)
Q Consensus 754 ~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~ 828 (1275)
.+... ...++.++|++|++.++ .+||+||+.+....+. ....++.+++++++++.+|+.+..+.... ..
T Consensus 67 ~~~~~~~~~~~~~~~~i~~~~q~~~~~-~~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~---~~ 140 (227)
T cd03260 67 KDIYDLDVDVLELRRRVGMVFQKPNPF-PGSIYDNVAYGLRLHG--IKLKEELDERVEEALRKAALWDEVKDRLH---AL 140 (227)
T ss_pred EEhhhcchHHHHHHhhEEEEecCchhc-cccHHHHHHhHHHhcC--CCcHHHHHHHHHHHHHHcCCChHHhccCC---cc
Confidence 87532 22356789999998888 7999999988654331 11222245668899999999876555420 24
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcE
Q 000808 829 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQ 908 (1275)
Q Consensus 829 ~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~ 908 (1275)
+||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|++++++ +|||+++|+++ ++.+.+|++++|.+ |+
T Consensus 141 ~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~tii~~sH~~~-~~~~~~d~i~~l~~-G~ 217 (227)
T cd03260 141 GLSGGQQQRLCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKKE-YTIVIVTHNMQ-QAARVADRTAFLLN-GR 217 (227)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhC-cEEEEEeccHH-HHHHhCCEEEEEeC-CE
Confidence 79999999999999999999999999999999999999999999999876 99999999986 56778999999986 79
Q ss_pred EEEECCCC
Q 000808 909 EIYVGPLG 916 (1275)
Q Consensus 909 ~~~~g~~~ 916 (1275)
+++.|++.
T Consensus 218 i~~~g~~~ 225 (227)
T cd03260 218 LVEFGPTE 225 (227)
T ss_pred EEEecCcc
Confidence 99998863
No 103
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-37 Score=311.96 Aligned_cols=215 Identities=27% Similarity=0.412 Sum_probs=181.8
Q ss_pred EEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCC
Q 000808 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1275)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 757 (1275)
++.+|++|+.. .+.+|++||++++|||++||+||||||||||||.|+|...+ .+|++.+||.+.+
T Consensus 2 i~a~nls~~~~-------------Gr~ll~~vsl~~~pGev~ailGPNGAGKSTlLk~LsGel~p--~~G~v~~~g~~l~ 66 (259)
T COG4559 2 IRAENLSYSLA-------------GRRLLDGVSLDLRPGEVLAILGPNGAGKSTLLKALSGELSP--DSGEVTLNGVPLN 66 (259)
T ss_pred eeeeeeEEEee-------------cceeccCcceeccCCcEEEEECCCCccHHHHHHHhhCccCC--CCCeEeeCCcChh
Confidence 56788998873 46799999999999999999999999999999999997763 3799999999865
Q ss_pred c---ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCC--CCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCH
Q 000808 758 Q---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPE--VDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLST 832 (1275)
Q Consensus 758 ~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~--~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSg 832 (1275)
. ....+.-+.+||+..+-...||+|-+.++.. |.. ...++..+.+++++...++.+++.+.. ..|||
T Consensus 67 ~~~~~~lA~~raVlpQ~s~laFpFtv~eVV~mGr~---p~~~g~~~~e~~~i~~~ala~~d~~~la~R~y-----~~LSG 138 (259)
T COG4559 67 SWPPEELARHRAVLPQNSSLAFPFTVQEVVQMGRI---PHRSGREPEEDERIAAQALAATDLSGLAGRDY-----RTLSG 138 (259)
T ss_pred hCCHHHHHHHhhhcccCcccccceEHHHHHHhccc---ccccCCCchhhHHHHHHHHHHcChhhhhccch-----hhcCc
Confidence 4 2334456889999888777899999998743 322 122345556889999999999887665 57999
Q ss_pred HHHHHHHHHHHHhh------CCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecC
Q 000808 833 EQRKRLTIAVELVA------NPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRG 906 (1275)
Q Consensus 833 Gerqrv~ia~~l~~------~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~g 906 (1275)
||||||.+||.|++ ++++||||||||.||...+..++++.|+++++|..|+++.||++. ...++|+|++|++
T Consensus 139 GEqQRVqlARvLaQl~~~v~~~r~L~LDEPtsaLDi~HQ~~tl~laR~la~~g~~V~~VLHDLNL-AA~YaDrivll~~- 216 (259)
T COG4559 139 GEQQRVQLARVLAQLWPPVPSGRWLFLDEPTSALDIAHQHHTLRLARQLAREGGAVLAVLHDLNL-AAQYADRIVLLHQ- 216 (259)
T ss_pred hHHHHHHHHHHHHHccCCCCCCceEEecCCccccchHHHHHHHHHHHHHHhcCCcEEEEEccchH-HHHhhheeeeeeC-
Confidence 99999999999976 456999999999999999999999999999999999999999985 5689999999996
Q ss_pred cEEEEECCCCc
Q 000808 907 GQEIYVGPLGR 917 (1275)
Q Consensus 907 g~~~~~g~~~~ 917 (1275)
||++..|++.+
T Consensus 217 Grv~a~g~p~~ 227 (259)
T COG4559 217 GRVIASGSPQD 227 (259)
T ss_pred CeEeecCCHHH
Confidence 89999999853
No 104
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=4.6e-37 Score=337.41 Aligned_cols=221 Identities=37% Similarity=0.619 Sum_probs=181.2
Q ss_pred EEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCC-ceEEEEEEEcCccC
Q 000808 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG-GYITGNITISGYPK 756 (1275)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~-~~~~G~i~~~g~~~ 756 (1275)
+.|+|+++.++.. +..+.+|+|+|+++++||+++|+||||||||||+++|+|..+. .+.+|+|.++|.+.
T Consensus 4 ~~~~~~~~~~~~~---------~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~ 74 (226)
T cd03234 4 LPWWDVGLKAKNW---------NKYARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPR 74 (226)
T ss_pred ceeecceeeeecC---------ccccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEEC
Confidence 5688888877411 0135799999999999999999999999999999999997641 13589999999876
Q ss_pred CcccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHH-HHHHcCCCccccccccCCCCCCCCHHHH
Q 000808 757 KQETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEE-IMELVELNPLRQSLVGLPGESGLSTEQR 835 (1275)
Q Consensus 757 ~~~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~-~l~~l~l~~~~~~~~~~~~~~~lSgGer 835 (1275)
.....++.++|++|++.+++.+|++||+.+......+.........+++++ .++.+++.+..++.+ +.||||||
T Consensus 75 ~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~ 149 (226)
T cd03234 75 KPDQFQKCVAYVRQDDILLPGLTVRETLTYTAILRLPRKSSDAIRKKRVEDVLLRDLALTRIGGNLV-----KGISGGER 149 (226)
T ss_pred ChHHhcccEEEeCCCCccCcCCcHHHHHHHHHHhhcccccchHHHHHHHHHHHHHhhcchhhhcccc-----cCcCHHHH
Confidence 544456779999999999999999999998765432222122222334555 889999987766654 47999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcEEEEEC
Q 000808 836 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVG 913 (1275)
Q Consensus 836 qrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g 913 (1275)
||++|||+|+.+|++++|||||+|||+.++..+.+.|+++.++|+|+|+++|++..++.+.+|++++|++ |++++.|
T Consensus 150 qrl~laral~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~-G~i~~~g 226 (226)
T cd03234 150 RRVSIAVQLLWDPKVLILDEPTSGLDSFTALNLVSTLSQLARRNRIVILTIHQPRSDLFRLFDRILLLSS-GEIVYSG 226 (226)
T ss_pred HHHHHHHHHHhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCCCHHHHHhCCEEEEEeC-CEEEecC
Confidence 9999999999999999999999999999999999999998777899999999985568899999999986 7888765
No 105
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=2.6e-37 Score=337.90 Aligned_cols=208 Identities=28% Similarity=0.398 Sum_probs=172.5
Q ss_pred EEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCCc
Q 000808 679 TFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 758 (1275)
Q Consensus 679 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 758 (1275)
+++|++++++.. ...+.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~~~---------~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~~~ 70 (218)
T cd03255 2 ELKNLSKTYGGG---------GEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDR--PTSGEVRVDGTDISK 70 (218)
T ss_pred eEeeeEEEecCC---------CcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcC--CCceeEEECCEehhh
Confidence 577888776310 001469999999999999999999999999999999999865 348999999987542
Q ss_pred cc-------ccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCC
Q 000808 759 ET-------FTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLS 831 (1275)
Q Consensus 759 ~~-------~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lS 831 (1275)
.. .++.++|++|++.+++.+||+||+.+....+. ......+++++++++.+|+.+..++.+ +.||
T Consensus 71 ~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 142 (218)
T cd03255 71 LSEKELAAFRRRHIGFVFQSFNLLPDLTALENVELPLLLAG---VPKKERRERAEELLERVGLGDRLNHYP-----SELS 142 (218)
T ss_pred cchhHHHHHHhhcEEEEeeccccCCCCcHHHHHHHHHhhcC---CCHHHHHHHHHHHHHHcCCchhhhcCh-----hhcC
Confidence 11 24578999999999999999999988754431 223334567889999999988777665 4699
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhh-CCCEEEEEecCCCHHHHHhhhhhheeecCcE
Q 000808 832 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFESFDELFLMKRGGQ 908 (1275)
Q Consensus 832 gGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~ 908 (1275)
||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++++ +|+|||+++|+++ ++ ..+|++++|++ |+
T Consensus 143 ~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~-~~~d~v~~l~~-G~ 217 (218)
T cd03255 143 GGQQQRVAIARALANDPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPE-LA-EYADRIIELRD-GK 217 (218)
T ss_pred HHHHHHHHHHHHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHH-HH-hhhcEEEEeeC-Cc
Confidence 9999999999999999999999999999999999999999999876 5899999999986 34 48999999986 54
No 106
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.6e-38 Score=327.74 Aligned_cols=177 Identities=25% Similarity=0.363 Sum_probs=154.4
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCccccceEEEeccccccCCCCCHHHHHHHHHhccCCCCc
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFVPQRTAAYISQHDVHIGEMTVRETLAFSARCQGVGSR 80 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~ 80 (1275)
+++|+||||||||||||+|+|+.+|+ +|+|.++|.++. .+...++||+|++.++|-+||+||+.|+.+..+..
T Consensus 31 fvsilGpSGcGKSTLLriiAGL~~p~---~G~V~~~g~~v~--~p~~~~~~vFQ~~~LlPW~Tv~~NV~l~l~~~~~~-- 103 (248)
T COG1116 31 FVAILGPSGCGKSTLLRLIAGLEKPT---SGEVLLDGRPVT--GPGPDIGYVFQEDALLPWLTVLDNVALGLELRGKS-- 103 (248)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCcccC--CCCCCEEEEeccCcccchhhHHhhheehhhccccc--
Confidence 47999999999999999999999997 999999998873 34568999999999999999999999988765311
Q ss_pred chhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhhHHHHHh
Q 000808 81 YDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEMMV 160 (1275)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~al~ 160 (1275)
..+....++++|+.+||....+ ++++.|||||||||+|||||+
T Consensus 104 --------------------------------~~e~~~~a~~~L~~VgL~~~~~-----~~P~qLSGGMrQRVaiARAL~ 146 (248)
T COG1116 104 --------------------------------KAEARERAKELLELVGLAGFED-----KYPHQLSGGMRQRVAIARALA 146 (248)
T ss_pred --------------------------------hHhHHHHHHHHHHHcCCcchhh-----cCccccChHHHHHHHHHHHHh
Confidence 0112235678899999987664 678899999999999999999
Q ss_pred cCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCC
Q 000808 161 GPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDA 222 (1275)
Q Consensus 161 ~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G 222 (1275)
.+|++|+||||+++||+.|+.++.+.+.++.+.. +.+++.++|+.+|+..++|||++|.++
T Consensus 147 ~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~-~~TvllVTHdi~EAv~LsdRivvl~~~ 207 (248)
T COG1116 147 TRPKLLLLDEPFGALDALTREELQDELLRLWEET-RKTVLLVTHDVDEAVYLADRVVVLSNR 207 (248)
T ss_pred cCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhh-CCEEEEEeCCHHHHHhhhCEEEEecCC
Confidence 9999999999999999999999999999887754 566677999999999999999999984
No 107
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=8.3e-38 Score=367.26 Aligned_cols=217 Identities=26% Similarity=0.426 Sum_probs=181.8
Q ss_pred CCcEEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcC
Q 000808 674 EPHSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISG 753 (1275)
Q Consensus 674 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g 753 (1275)
-...++|+||+|+|+.++ +.+||||+||+|+|||.+||+||||+||||+.+.|-...+ +.+|+|.+||
T Consensus 462 ~~G~IeF~~VsFaYP~Rp----------~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~--PtsG~IllDG 529 (716)
T KOG0058|consen 462 LQGVIEFEDVSFAYPTRP----------DVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYD--PTSGRILLDG 529 (716)
T ss_pred ccceEEEEEeeeecCCCC----------CchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcC--CCCCeEEECC
Confidence 346899999999997653 3579999999999999999999999999999999998765 4589999999
Q ss_pred ccCCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHH-----HHHHHHcCCCccccccccCC
Q 000808 754 YPKKQ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFI-----EEIMELVELNPLRQSLVGLP 825 (1275)
Q Consensus 754 ~~~~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~-----~~~l~~l~l~~~~~~~~~~~ 825 (1275)
.|+++ ..+++.+|+|.|||.+|. -|++||+.|+.. +.+.++..+.+ .+-+ .++.+-.||.+|..
T Consensus 530 ~~i~~~~~~~lr~~Ig~V~QEPvLFs-~sI~eNI~YG~~-----~~t~e~i~~AAk~ANah~FI--~~~p~gY~T~VGEk 601 (716)
T KOG0058|consen 530 VPISDINHKYLRRKIGLVGQEPVLFS-GSIRENIAYGLD-----NATDEEIEAAAKMANAHEFI--TNFPDGYNTVVGEK 601 (716)
T ss_pred eehhhcCHHHHHHHeeeeeccceeec-ccHHHHHhcCCC-----CCCHHHHHHHHHHhChHHHH--HhCccccccccCCc
Confidence 99754 456789999999999986 599999998753 33333322211 1122 34566678999865
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeec
Q 000808 826 GESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKR 905 (1275)
Q Consensus 826 ~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~ 905 (1275)
+ ..||||||||++|||||++||+||||||+||+||+++...+.+.|.+..+ ++|||++.|+++ ..+.+|+|+++++
T Consensus 602 G-~qLSGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~-~rTVlvIAHRLS--TV~~Ad~Ivvi~~ 677 (716)
T KOG0058|consen 602 G-SQLSGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQ-GRTVLVIAHRLS--TVRHADQIVVIDK 677 (716)
T ss_pred c-ccccchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhc-CCeEEEEehhhh--HhhhccEEEEEcC
Confidence 4 37999999999999999999999999999999999999999999988765 699999999975 6789999999996
Q ss_pred CcEEEEECCC
Q 000808 906 GGQEIYVGPL 915 (1275)
Q Consensus 906 gg~~~~~g~~ 915 (1275)
|+++..|.-
T Consensus 678 -G~V~E~G~h 686 (716)
T KOG0058|consen 678 -GRVVEMGTH 686 (716)
T ss_pred -CeEEecccH
Confidence 799999965
No 108
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=3.4e-37 Score=334.23 Aligned_cols=206 Identities=29% Similarity=0.389 Sum_probs=174.7
Q ss_pred EEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCCc
Q 000808 679 TFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 758 (1275)
Q Consensus 679 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 758 (1275)
+++|+++.++ ++++|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~ 66 (208)
T cd03268 2 KTNDLTKTYG-------------KKRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIK--PDSGEITFDGKSYQK 66 (208)
T ss_pred EEEEEEEEEC-------------CeEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCCcccc
Confidence 5778887763 2469999999999999999999999999999999999865 358999999987542
Q ss_pred -ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHH
Q 000808 759 -ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKR 837 (1275)
Q Consensus 759 -~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqr 837 (1275)
...++.++|++|++.+++.+|++||+.+....+. . .+++++++++.+++.+..++.+ ..||||||||
T Consensus 67 ~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~----~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qr 134 (208)
T cd03268 67 NIEALRRIGALIEAPGFYPNLTARENLRLLARLLG---I----RKKRIDEVLDVVGLKDSAKKKV-----KGFSLGMKQR 134 (208)
T ss_pred hHHHHhhEEEecCCCccCccCcHHHHHHHHHHhcC---C----cHHHHHHHHHHcCCHHHHhhhH-----hhCCHHHHHH
Confidence 2335578999999999999999999987654321 1 1345788999999988777665 4699999999
Q ss_pred HHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcEEEEEC
Q 000808 838 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVG 913 (1275)
Q Consensus 838 v~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g 913 (1275)
++||++|+.+|++++|||||+|||+.++..+.+.|++++++|+|||+++|++. ++.+.+|++++|++ |++++.|
T Consensus 135 v~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~v~~l~~-g~i~~~g 208 (208)
T cd03268 135 LGIALALLGNPDLLILDEPTNGLDPDGIKELRELILSLRDQGITVLISSHLLS-EIQKVADRIGIINK-GKLIEEG 208 (208)
T ss_pred HHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHHhcCEEEEEEC-CEEEecC
Confidence 99999999999999999999999999999999999998777899999999975 46678999999986 7887654
No 109
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2.1e-37 Score=318.32 Aligned_cols=215 Identities=27% Similarity=0.389 Sum_probs=178.8
Q ss_pred EEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCC
Q 000808 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1275)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 757 (1275)
++++|++..| ++.++|++||+++++||+++|+||||||||||||+|+|..+. .+|+|.++|.++.
T Consensus 4 L~v~~l~~~Y-------------G~~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~--~~G~I~~~G~dit 68 (237)
T COG0410 4 LEVENLSAGY-------------GKIQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRP--RSGRIIFDGEDIT 68 (237)
T ss_pred eeEEeEeecc-------------cceeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCeeEEECCeecC
Confidence 6778887665 345799999999999999999999999999999999998763 4899999999976
Q ss_pred cc----cccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcC-CCccccccccCCCCCCCCH
Q 000808 758 QE----TFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVE-LNPLRQSLVGLPGESGLST 832 (1275)
Q Consensus 758 ~~----~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~-l~~~~~~~~~~~~~~~lSg 832 (1275)
.. ..++-++||||....||.|||+|||..++..+.. ++..+..++++.+.+= |.+.+++..| .|||
T Consensus 69 ~~p~~~r~r~Gi~~VPegR~iF~~LTVeENL~~g~~~~~~----~~~~~~~~e~v~~lFP~Lker~~~~aG-----~LSG 139 (237)
T COG0410 69 GLPPHERARLGIAYVPEGRRIFPRLTVEENLLLGAYARRD----KEAQERDLEEVYELFPRLKERRNQRAG-----TLSG 139 (237)
T ss_pred CCCHHHHHhCCeEeCcccccchhhCcHHHHHhhhhhcccc----cccccccHHHHHHHChhHHHHhcCccc-----CCCh
Confidence 42 3456789999999999999999999987654422 1111222566776663 5555566654 5999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhhhhheeecCcEEEE
Q 000808 833 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDELFLMKRGGQEIY 911 (1275)
Q Consensus 833 Gerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~ 911 (1275)
||||-++|||||+.+|++|+|||||.||-|.-..+|.+.++++.++ |.||+.+-++.. ...+..||.++|.+ |++++
T Consensus 140 GEQQMLAiaRALm~~PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~-~Al~iaDr~yvle~-Griv~ 217 (237)
T COG0410 140 GEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNAR-FALEIADRGYVLEN-GRIVL 217 (237)
T ss_pred HHHHHHHHHHHHhcCCCEEEecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHH-HHHHhhCEEEEEeC-CEEEE
Confidence 9999999999999999999999999999999999999999999866 779999998875 46789999999986 89999
Q ss_pred ECCCCcc
Q 000808 912 VGPLGRH 918 (1275)
Q Consensus 912 ~g~~~~~ 918 (1275)
.|+.++.
T Consensus 218 ~G~~~eL 224 (237)
T COG0410 218 SGTAAEL 224 (237)
T ss_pred ecCHHHH
Confidence 9997543
No 110
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.3e-37 Score=338.96 Aligned_cols=217 Identities=24% Similarity=0.319 Sum_probs=180.9
Q ss_pred EEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCC
Q 000808 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1275)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 757 (1275)
++++|+++.++.. .+.+++|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 2 i~~~~l~~~~~~~---------~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~ 70 (233)
T cd03258 2 IELKNVSKVFGDT---------GGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERP--TSGSVLVDGTDLT 70 (233)
T ss_pred eEEecceEEccCC---------CCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEEcc
Confidence 5678888776310 0012699999999999999999999999999999999998763 4799999998764
Q ss_pred cc------cccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCC
Q 000808 758 QE------TFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLS 831 (1275)
Q Consensus 758 ~~------~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lS 831 (1275)
.. ..++.++|++|++.+++.+|+.||+.+....+. .......+.++++++.+++.+..+..+ ..||
T Consensus 71 ~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 142 (233)
T cd03258 71 LLSGKELRKARRRIGMIFQHFNLLSSRTVFENVALPLEIAG---VPKAEIEERVLELLELVGLEDKADAYP-----AQLS 142 (233)
T ss_pred cCCHHHHHHHHhheEEEccCcccCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHCCChhhhhcCh-----hhCC
Confidence 31 124678999999999999999999988654331 233344556889999999987777665 4799
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhhhhheeecCcEEE
Q 000808 832 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDELFLMKRGGQEI 910 (1275)
Q Consensus 832 gGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~ 910 (1275)
||||||++||++|+.+|++++|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |+++
T Consensus 143 ~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~-~~~~~~d~i~~l~~-G~i~ 220 (233)
T cd03258 143 GGQKQRVGIARALANNPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEME-VVKRICDRVAVMEK-GEVV 220 (233)
T ss_pred HHHHHHHHHHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999998765 899999999975 56778999999985 7999
Q ss_pred EECCC
Q 000808 911 YVGPL 915 (1275)
Q Consensus 911 ~~g~~ 915 (1275)
..|+.
T Consensus 221 ~~~~~ 225 (233)
T cd03258 221 EEGTV 225 (233)
T ss_pred EecCH
Confidence 98875
No 111
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=4.7e-37 Score=336.37 Aligned_cols=214 Identities=26% Similarity=0.395 Sum_probs=179.3
Q ss_pred EEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCC
Q 000808 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1275)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 757 (1275)
++++|+++.+.. +++++|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 1 l~~~~l~~~~~~-----------~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 67 (220)
T cd03263 1 LQIRNLTKTYKK-----------GTKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELR--PTSGTAYINGYSIR 67 (220)
T ss_pred CEEEeeEEEeCC-----------CCceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEecc
Confidence 357788877631 11469999999999999999999999999999999999865 34899999998764
Q ss_pred c--ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHH
Q 000808 758 Q--ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQR 835 (1275)
Q Consensus 758 ~--~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGer 835 (1275)
. ..+++.++|++|++.+++.+|++||+.+...... ...++.+++++++++.++|.+..++.+ ..||||||
T Consensus 68 ~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~ 139 (220)
T cd03263 68 TDRKAARQSLGYCPQFDALFDELTVREHLRFYARLKG---LPKSEIKEEVELLLRVLGLTDKANKRA-----RTLSGGMK 139 (220)
T ss_pred cchHHHhhhEEEecCcCCccccCCHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHHhChh-----hhCCHHHH
Confidence 2 2345668999999999889999999987654331 223334556889999999987777665 46999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcEEEEECCC
Q 000808 836 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVGPL 915 (1275)
Q Consensus 836 qrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 915 (1275)
||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|+++ .+.+.+|++++|.+ |+++..|++
T Consensus 140 qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~i~~l~~-g~i~~~~~~ 216 (220)
T cd03263 140 RKLSLAIALIGGPSVLLLDEPTSGLDPASRRAIWDLILEVRK-GRSIILTTHSMD-EAEALCDRIAIMSD-GKLRCIGSP 216 (220)
T ss_pred HHHHHHHHHhcCCCEEEECCCCCCCCHHHHHHHHHHHHHHhc-CCEEEEEcCCHH-HHHHhcCEEEEEEC-CEEEecCCH
Confidence 999999999999999999999999999999999999999876 599999999986 46678999999986 789998876
No 112
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=6.2e-37 Score=333.93 Aligned_cols=206 Identities=26% Similarity=0.343 Sum_probs=173.5
Q ss_pred EEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCC
Q 000808 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1275)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 757 (1275)
++++|++++++ +++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~------------~~~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~~ 67 (214)
T TIGR02673 2 IEFHNVSKAYP------------GGVAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALT--PSRGQVRIAGEDVN 67 (214)
T ss_pred EEEEeeeEEeC------------CCceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcc
Confidence 56788887762 12459999999999999999999999999999999999865 34899999998764
Q ss_pred cc------cccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCC
Q 000808 758 QE------TFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLS 831 (1275)
Q Consensus 758 ~~------~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lS 831 (1275)
.. .+++.++|++|++.+++.+|+.||+.+....+ .......+++++++++.+++.+..++.+ ..||
T Consensus 68 ~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 139 (214)
T TIGR02673 68 RLRGRQLPLLRRRIGVVFQDFRLLPDRTVYENVALPLEVR---GKKEREIQRRVGAALRQVGLEHKADAFP-----EQLS 139 (214)
T ss_pred cCCHHHHHHHHhheEEEecChhhccCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCC
Confidence 21 23467899999999999999999998875432 1223344567889999999987666655 4699
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecC
Q 000808 832 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRG 906 (1275)
Q Consensus 832 gGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~g 906 (1275)
||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++.++|+|||++||+++ ++...+|++++|++|
T Consensus 140 ~G~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~i~~l~~G 213 (214)
T TIGR02673 140 GGEQQRVAIARAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLS-LVDRVAHRVIILDDG 213 (214)
T ss_pred HHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEEEEecCC
Confidence 99999999999999999999999999999999999999999998777899999999985 567789999999863
No 113
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.2e-37 Score=341.91 Aligned_cols=217 Identities=27% Similarity=0.320 Sum_probs=177.9
Q ss_pred EEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCCc
Q 000808 679 TFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 758 (1275)
Q Consensus 679 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 758 (1275)
+++|+++++. +++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~------------~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~ 67 (241)
T cd03256 2 EVENLSKTYP------------NGKKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVE--PTSGSVLIDGTDINK 67 (241)
T ss_pred EEeeEEEecC------------CccEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCCceEEECCEeccc
Confidence 5678877663 11469999999999999999999999999999999999865 347999999987642
Q ss_pred c------cccceEEEeccCCCCCCCCCHHHHHHHHHhccC-----CCCCCHHHHHHHHHHHHHHcCCCccccccccCCCC
Q 000808 759 E------TFTRISGYCEQNDIHSPFVTVYESLLYSAWLRL-----PPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGE 827 (1275)
Q Consensus 759 ~------~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~-----~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~ 827 (1275)
. ..++.++|++|++.+++.+||+||+.+...... .........+++++++++.+++.+..+..+
T Consensus 68 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~----- 142 (241)
T cd03256 68 LKGKALRQLRRQIGMIFQQFNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERVGLLDKAYQRA----- 142 (241)
T ss_pred cCHhHHHHHHhccEEEcccCcccccCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHcCChhhhCCCc-----
Confidence 1 234678999999999999999999977532110 001111233456788999999987766654
Q ss_pred CCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhhhhheeecC
Q 000808 828 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDELFLMKRG 906 (1275)
Q Consensus 828 ~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~g 906 (1275)
..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++...+|++++|.+
T Consensus 143 ~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~-~~~~~~d~v~~l~~- 220 (241)
T cd03256 143 DQLSGGQQQRVAIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVD-LAREYADRIVGLKD- 220 (241)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-
Confidence 479999999999999999999999999999999999999999999998764 899999999986 56678999999986
Q ss_pred cEEEEECCCC
Q 000808 907 GQEIYVGPLG 916 (1275)
Q Consensus 907 g~~~~~g~~~ 916 (1275)
|++++.|+++
T Consensus 221 G~i~~~~~~~ 230 (241)
T cd03256 221 GRIVFDGPPA 230 (241)
T ss_pred CEEEeecCHH
Confidence 7899998863
No 114
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-37 Score=323.01 Aligned_cols=218 Identities=26% Similarity=0.359 Sum_probs=186.3
Q ss_pred EEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCC
Q 000808 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1275)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 757 (1275)
++.++++.+. +...+++|||+++++||+++|+||||||||||+|+|+|..++ ..|+|.++|.++.
T Consensus 5 L~v~~l~k~F-------------GGl~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~P--~~G~v~~~G~~it 69 (250)
T COG0411 5 LEVRGLSKRF-------------GGLTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYKP--SSGTVIFRGRDIT 69 (250)
T ss_pred eeeccceeec-------------CCEEEEeceeEEEcCCeEEEEECCCCCCceeeeeeecccccC--CCceEEECCcccC
Confidence 5566666554 456799999999999999999999999999999999998763 4899999999875
Q ss_pred ccc----ccceEEEeccCCCCCCCCCHHHHHHHHHhcc--------CCCC-CCHHHHHHHHHHHHHHcCCCccccccccC
Q 000808 758 QET----FTRISGYCEQNDIHSPFVTVYESLLYSAWLR--------LPPE-VDSETQKMFIEEIMELVELNPLRQSLVGL 824 (1275)
Q Consensus 758 ~~~----~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~--------~~~~-~~~~~~~~~~~~~l~~l~l~~~~~~~~~~ 824 (1275)
... .+.-++--+|...+|+.|||.||+..++..+ .+.. ...++..+++.++|+.+||.+.+|...|
T Consensus 70 ~l~p~~iar~Gi~RTFQ~~rlF~~lTVlENv~va~~~~~~~~~~l~~~~~~~~e~~~~e~A~~~Le~vgL~~~a~~~A~- 148 (250)
T COG0411 70 GLPPHRIARLGIARTFQITRLFPGLTVLENVAVGAHARLGLSGLLGRPRARKEEREARERARELLEFVGLGELADRPAG- 148 (250)
T ss_pred CCCHHHHHhccceeecccccccCCCcHHHHHHHHhhhhhhhhhhhccccchhhHHHHHHHHHHHHHHcCCchhhcchhh-
Confidence 422 2345677899999999999999998875433 1111 1234556778999999999999999975
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhhhhhee
Q 000808 825 PGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDELFLM 903 (1275)
Q Consensus 825 ~~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l 903 (1275)
+||+|||||+.|||||+.+|++|+||||.+||.+.....+.+.|+++.++ |.||+++-||.+ -++.++|||++|
T Consensus 149 ----~LsyG~qR~LEIArALa~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~~g~tillIEHdM~-~Vm~l~dri~Vl 223 (250)
T COG0411 149 ----NLSYGQQRRLEIARALATQPKLLLLDEPAAGLNPEETEELAELIRELRDRGGVTILLIEHDMK-LVMGLADRIVVL 223 (250)
T ss_pred ----cCChhHhHHHHHHHHHhcCCCEEEecCccCCCCHHHHHHHHHHHHHHHhcCCcEEEEEEeccH-HHhhhccEEEec
Confidence 59999999999999999999999999999999999999999999999874 799999999997 488999999999
Q ss_pred ecCcEEEEECCCCc
Q 000808 904 KRGGQEIYVGPLGR 917 (1275)
Q Consensus 904 ~~gg~~~~~g~~~~ 917 (1275)
+. |+++..|++++
T Consensus 224 ~~-G~~IAeG~P~e 236 (250)
T COG0411 224 NY-GEVIAEGTPEE 236 (250)
T ss_pred cC-CcCcccCCHHH
Confidence 96 79999999853
No 115
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.4e-37 Score=319.41 Aligned_cols=194 Identities=26% Similarity=0.370 Sum_probs=164.3
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCcc------ccceEEEeccccccCCCCCHHHHHHHHHhc
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV------PQRTAAYISQHDVHIGEMTVRETLAFSARC 74 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~~------~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~ 74 (1275)
+++|+|||||||||||++|.|+++|+ +|+|+++|.++.... .++++|+++|+-++|.++||.||+.|..+-
T Consensus 36 i~~iiGgSGsGKStlLr~I~Gll~P~---~GeI~i~G~~i~~ls~~~~~~ir~r~GvlFQ~gALFssltV~eNVafplre 112 (263)
T COG1127 36 ILAILGGSGSGKSTLLRLILGLLRPD---KGEILIDGEDIPQLSEEELYEIRKRMGVLFQQGALFSSLTVFENVAFPLRE 112 (263)
T ss_pred EEEEECCCCcCHHHHHHHHhccCCCC---CCeEEEcCcchhccCHHHHHHHHhheeEEeeccccccccchhHhhheehHh
Confidence 47999999999999999999999998 999999999986542 346799999999999999999999996542
Q ss_pred cCCCCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhh
Q 000808 75 QGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVT 154 (1275)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvs 154 (1275)
+. + . .+...++++..-|+..||... +++..+.+||||+|||++
T Consensus 113 ~~-----~----l------------------------p~~~i~~lv~~KL~~VGL~~~----~~~~~PsELSGGM~KRva 155 (263)
T COG1127 113 HT-----K----L------------------------PESLIRELVLMKLELVGLRGA----AADLYPSELSGGMRKRVA 155 (263)
T ss_pred hc-----c----C------------------------CHHHHHHHHHHHHHhcCCChh----hhhhCchhhcchHHHHHH
Confidence 21 0 0 111222344555888899754 346778899999999999
Q ss_pred HHHHHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhhHH
Q 000808 155 TGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVL 234 (1275)
Q Consensus 155 iA~al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~~~ 234 (1275)
||||++.+|+++++||||+||||.++..+.+.++++.+.. +.|+++++|+.++++..|||+++|.+|||+..|+++++.
T Consensus 156 LARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~l-g~T~i~VTHDl~s~~~i~Drv~~L~~gkv~~~Gt~~el~ 234 (263)
T COG1127 156 LARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDAL-GLTVIMVTHDLDSLLTIADRVAVLADGKVIAEGTPEELL 234 (263)
T ss_pred HHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhh-CCEEEEEECChHHHHhhhceEEEEeCCEEEEeCCHHHHH
Confidence 9999999999999999999999999999999999987765 455556899999999999999999999999999999986
Q ss_pred H
Q 000808 235 D 235 (1275)
Q Consensus 235 ~ 235 (1275)
+
T Consensus 235 ~ 235 (263)
T COG1127 235 A 235 (263)
T ss_pred h
Confidence 4
No 116
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=1e-36 Score=338.13 Aligned_cols=214 Identities=21% Similarity=0.339 Sum_probs=180.7
Q ss_pred EEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCC
Q 000808 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1275)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 757 (1275)
++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 66 (240)
T PRK09493 2 IEFKNVSKHFG-------------PTQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEE--ITSGDLIVDGLKVN 66 (240)
T ss_pred EEEEeEEEEEC-------------CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECC
Confidence 56788887763 2459999999999999999999999999999999999865 35899999998764
Q ss_pred c-----ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCH
Q 000808 758 Q-----ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLST 832 (1275)
Q Consensus 758 ~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSg 832 (1275)
. ...++.++|++|++.+++.+||+||+.+...... .....+.++++.++++.+|+.+..+..+ +.|||
T Consensus 67 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~ 139 (240)
T PRK09493 67 DPKVDERLIRQEAGMVFQQFYLFPHLTALENVMFGPLRVR--GASKEEAEKQARELLAKVGLAERAHHYP-----SELSG 139 (240)
T ss_pred cCChhHHHHhhceEEEecccccCCCCcHHHHHHhHHHHhc--CCCHHHHHHHHHHHHHHcCChHHHhcCh-----hhcCH
Confidence 2 1235678999999999999999999987542111 1233445567889999999987766665 46999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcEEEEE
Q 000808 833 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYV 912 (1275)
Q Consensus 833 Gerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~ 912 (1275)
|||||++|||+|+.+|++++|||||+|||+.++..+.+.|++++++|+|||++||+++ ++.+.+|++++|++ |++++.
T Consensus 140 G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~ 217 (240)
T PRK09493 140 GQQQRVAIARALAVKPKLMLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIG-FAEKVASRLIFIDK-GRIAED 217 (240)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEee
Confidence 9999999999999999999999999999999999999999998777899999999986 56678999999986 799999
Q ss_pred CCC
Q 000808 913 GPL 915 (1275)
Q Consensus 913 g~~ 915 (1275)
|+.
T Consensus 218 g~~ 220 (240)
T PRK09493 218 GDP 220 (240)
T ss_pred CCH
Confidence 886
No 117
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.5e-37 Score=344.85 Aligned_cols=203 Identities=24% Similarity=0.301 Sum_probs=173.2
Q ss_pred cccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCCcc---c----ccceEEEeccCCC
Q 000808 701 DKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQE---T----FTRISGYCEQNDI 773 (1275)
Q Consensus 701 ~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~~---~----~~~~~~~v~q~~~ 773 (1275)
+.+.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+.... . .++.++|++|++.
T Consensus 35 ~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p--~~G~i~i~g~~~~~~~~~~~~~~~~~~i~~v~q~~~ 112 (269)
T cd03294 35 GQTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEP--TSGKVLIDGQDIAAMSRKELRELRRKKISMVFQSFA 112 (269)
T ss_pred CCceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCeEEEECCEEccccChhhhhhhhcCcEEEEecCcc
Confidence 456799999999999999999999999999999999998753 479999999875421 1 1356899999999
Q ss_pred CCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEE
Q 000808 774 HSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFM 853 (1275)
Q Consensus 774 ~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~~l~~~p~illl 853 (1275)
+++.+|++||+.+..... .......+++++++++.+||.+..++.+ +.||||||||++|||||+.+|++|+|
T Consensus 113 ~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~Gq~qrv~lAral~~~p~illL 184 (269)
T cd03294 113 LLPHRTVLENVAFGLEVQ---GVPRAEREERAAEALELVGLEGWEHKYP-----DELSGGMQQRVGLARALAVDPDILLM 184 (269)
T ss_pred cCCCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCHhHhhCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 999999999998865432 1223344566889999999988777765 46999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhhhhheeecCcEEEEECCC
Q 000808 854 DEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVGPL 915 (1275)
Q Consensus 854 DEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 915 (1275)
||||+|||+.++..+.+.|+++.++ |+|||+++|+++ ++.+.+|++++|++ |+++..|+.
T Consensus 185 DEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~-~~~~~~d~v~~l~~-G~i~~~g~~ 245 (269)
T cd03294 185 DEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLD-EALRLGDRIAIMKD-GRLVQVGTP 245 (269)
T ss_pred cCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEEEeCCH
Confidence 9999999999999999999998754 899999999975 56788999999985 789998876
No 118
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-36 Score=333.91 Aligned_cols=217 Identities=24% Similarity=0.318 Sum_probs=179.3
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 756 (1275)
-++++|+++.+... ...+++|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~~~---------~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~i 73 (233)
T PRK11629 5 LLQCDNLCKRYQEG---------SVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDT--PTSGDVIFNGQPM 73 (233)
T ss_pred eEEEEeEEEEcCCC---------CcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEc
Confidence 47899999887410 011469999999999999999999999999999999999865 3589999999876
Q ss_pred Cccc------c-cceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCC
Q 000808 757 KQET------F-TRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESG 829 (1275)
Q Consensus 757 ~~~~------~-~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~ 829 (1275)
.... . ++.++|++|++.+++.+|++||+.+....+ ....++.+++++++++.+|+.+..++.+ ..
T Consensus 74 ~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~ 145 (233)
T PRK11629 74 SKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIG---KKKPAEINSRALEMLAAVGLEHRANHRP-----SE 145 (233)
T ss_pred CcCCHHHHHHHHhccEEEEecCcccCCCCCHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCchhhhCCh-----hh
Confidence 4311 1 256899999998999999999998865432 1223344567889999999987766654 46
Q ss_pred CCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhh-CCCEEEEEecCCCHHHHHhhhhhheeecCcE
Q 000808 830 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFESFDELFLMKRGGQ 908 (1275)
Q Consensus 830 lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~ 908 (1275)
||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ +|+|||++||+++ + ...+|++++|.+ |+
T Consensus 146 LSgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~-~-~~~~~~~~~l~~-G~ 222 (233)
T PRK11629 146 LSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQ-L-AKRMSRQLEMRD-GR 222 (233)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-H-HHhhCEEEEEEC-CE
Confidence 999999999999999999999999999999999999999999999875 5899999999975 3 445689999985 78
Q ss_pred EEEECCC
Q 000808 909 EIYVGPL 915 (1275)
Q Consensus 909 ~~~~g~~ 915 (1275)
++..|+.
T Consensus 223 i~~~~~~ 229 (233)
T PRK11629 223 LTAELSL 229 (233)
T ss_pred EEEEecc
Confidence 9988875
No 119
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.3e-37 Score=345.71 Aligned_cols=219 Identities=21% Similarity=0.304 Sum_probs=180.9
Q ss_pred EEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCC
Q 000808 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1275)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 757 (1275)
++++|+++.++... ...+.+|+||||+|++||++||+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~y~~~~--------~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~ 72 (287)
T PRK13637 3 IKIENLTHIYMEGT--------PFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLK--PTSGKIIIDGVDIT 72 (287)
T ss_pred EEEEEEEEECCCCC--------ccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCccEEEECCEECC
Confidence 67899998874110 012469999999999999999999999999999999999876 34899999998864
Q ss_pred c-----ccccceEEEeccCCC-CCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCC--ccccccccCCCCCC
Q 000808 758 Q-----ETFTRISGYCEQNDI-HSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELN--PLRQSLVGLPGESG 829 (1275)
Q Consensus 758 ~-----~~~~~~~~~v~q~~~-~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~--~~~~~~~~~~~~~~ 829 (1275)
. ...++.+||++|++. .+...||+||+.|..... ..+.++..++++++++.+||. +..++.+ +.
T Consensus 73 ~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~-----~~ 144 (287)
T PRK13637 73 DKKVKLSDIRKKVGLVFQYPEYQLFEETIEKDIAFGPINL---GLSEEEIENRVKRAMNIVGLDYEDYKDKSP-----FE 144 (287)
T ss_pred CcCccHHHHhhceEEEecCchhccccccHHHHHHhHHHHC---CCCHHHHHHHHHHHHHHcCCCchhhccCCc-----cc
Confidence 3 134567999999863 333579999998865432 234555566789999999996 5556554 57
Q ss_pred CCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhhhhheeecCcE
Q 000808 830 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDELFLMKRGGQ 908 (1275)
Q Consensus 830 lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~ 908 (1275)
||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||++||+++ ++...+|++++|++ |+
T Consensus 145 LSgGq~qrv~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~-~~~~~~drv~~l~~-G~ 222 (287)
T PRK13637 145 LSGGQKRRVAIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSME-DVAKLADRIIVMNK-GK 222 (287)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CE
Confidence 9999999999999999999999999999999999999999999999765 899999999975 56678999999986 79
Q ss_pred EEEECCCC
Q 000808 909 EIYVGPLG 916 (1275)
Q Consensus 909 ~~~~g~~~ 916 (1275)
+++.|++.
T Consensus 223 i~~~g~~~ 230 (287)
T PRK13637 223 CELQGTPR 230 (287)
T ss_pred EEEECCHH
Confidence 99999863
No 120
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-36 Score=338.25 Aligned_cols=212 Identities=26% Similarity=0.362 Sum_probs=178.9
Q ss_pred EEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCC
Q 000808 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1275)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 757 (1275)
++++|+++.+. ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~ 66 (255)
T PRK11248 2 LQISHLYADYG-------------GKPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVP--YQHGSITLDGKPVE 66 (255)
T ss_pred EEEEEEEEEeC-------------CeeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEECC
Confidence 56788887763 2459999999999999999999999999999999999865 34799999998764
Q ss_pred cccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHH
Q 000808 758 QETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKR 837 (1275)
Q Consensus 758 ~~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqr 837 (1275)
. ..+.++|++|++.+++.+||.||+.+....+ .....+.+++++++++.+|+.+..++.+ ..||||||||
T Consensus 67 ~--~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgGq~qr 136 (255)
T PRK11248 67 G--PGAERGVVFQNEGLLPWRNVQDNVAFGLQLA---GVEKMQRLEIAHQMLKKVGLEGAEKRYI-----WQLSGGQRQR 136 (255)
T ss_pred C--CCCcEEEEeCCCccCCCCcHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCChhHhhCCh-----hhCCHHHHHH
Confidence 3 2345799999999889999999998764432 1233344567889999999987766654 4699999999
Q ss_pred HHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhh-CCCEEEEEecCCCHHHHHhhhhhheeec-CcEEEEECCC
Q 000808 838 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFESFDELFLMKR-GGQEIYVGPL 915 (1275)
Q Consensus 838 v~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~~~~l~~-gg~~~~~g~~ 915 (1275)
++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ +|+|||++||+++ .+...+|++++|++ +|+++..++.
T Consensus 137 l~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tviivsH~~~-~~~~~~d~i~~l~~~~G~i~~~~~~ 215 (255)
T PRK11248 137 VGIARALAANPQLLLLDEPFGALDAFTREQMQTLLLKLWQETGKQVLLITHDIE-EAVFMATELVLLSPGPGRVVERLPL 215 (255)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeCCCcEEEEEecC
Confidence 9999999999999999999999999999999999999854 5899999999986 56788999999985 5899888765
No 121
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=3.9e-37 Score=332.80 Aligned_cols=192 Identities=29% Similarity=0.391 Sum_probs=162.6
Q ss_pred cceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCCcccccceEEEeccCCC-CCCCCCHH
Q 000808 703 LMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQETFTRISGYCEQNDI-HSPFVTVY 781 (1275)
Q Consensus 703 ~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~~~~~~~~~~v~q~~~-~~~~ltv~ 781 (1275)
+.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+......++.++|++|++. .+..+|++
T Consensus 13 ~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~~tv~ 90 (205)
T cd03226 13 TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIK--ESSGSILLNGKPIKAKERRKSIGYVMQDVDYQLFTDSVR 90 (205)
T ss_pred CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEhhhHHhhcceEEEecChhhhhhhccHH
Confidence 469999999999999999999999999999999999865 358999999987643334567999999974 33467999
Q ss_pred HHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCC
Q 000808 782 ESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 861 (1275)
Q Consensus 782 e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD 861 (1275)
||+.+..... . . ..++++++++.+|+.+..++.+ +.||||||||++|||||+.+|++++|||||+|||
T Consensus 91 e~l~~~~~~~---~--~--~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDEPt~~LD 158 (205)
T cd03226 91 EELLLGLKEL---D--A--GNEQAETVLKDLDLYALKERHP-----LSLSGGQKQRLAIAAALLSGKDLLIFDEPTSGLD 158 (205)
T ss_pred HHHhhhhhhc---C--c--cHHHHHHHHHHcCCchhcCCCc-----hhCCHHHHHHHHHHHHHHhCCCEEEEeCCCccCC
Confidence 9998754321 1 1 1245788999999988777765 4799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcEEE
Q 000808 862 ARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQEI 910 (1275)
Q Consensus 862 ~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~ 910 (1275)
+.++..+.+.|++++++|+|||++||+++ ++.+.+|++++|++ |+++
T Consensus 159 ~~~~~~l~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G~iv 205 (205)
T cd03226 159 YKNMERVGELIRELAAQGKAVIVITHDYE-FLAKVCDRVLLLAN-GAIV 205 (205)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEC
Confidence 99999999999998777999999999986 46678999999986 6653
No 122
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=8e-38 Score=350.19 Aligned_cols=206 Identities=28% Similarity=0.411 Sum_probs=176.5
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCccc-cceEEEeccccccCCCCCHHHHHHHHHhccCCCC
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFVP-QRTAAYISQHDVHIGEMTVRETLAFSARCQGVGS 79 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~~~-~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~ 79 (1275)
+++++|||||||||||++|+|...|+ +|+|.++|+++....+ +|.+|+|+|+..+||++||.||+.|+.+++...
T Consensus 33 f~~lLGPSGcGKTTlLR~IAGfe~p~---~G~I~l~G~~i~~lpp~kR~ig~VFQ~YALFPHltV~~NVafGLk~~~~~- 108 (352)
T COG3842 33 FVTLLGPSGCGKTTLLRMIAGFEQPS---SGEILLDGEDITDVPPEKRPIGMVFQSYALFPHMTVEENVAFGLKVRKKL- 108 (352)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCChhhcccceeecCcccCCCCcHHHHhhhhhhhcCCC-
Confidence 47899999999999999999999998 9999999999987654 588999999999999999999999998743210
Q ss_pred cchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhhHHHHH
Q 000808 80 RYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEMM 159 (1275)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~al 159 (1275)
..++.+.+++++|+.++|++.. ++++..|||||||||+|||||
T Consensus 109 --------------------------------~~~~i~~rv~e~L~lV~L~~~~-----~R~p~qLSGGQqQRVALARAL 151 (352)
T COG3842 109 --------------------------------KKAEIKARVEEALELVGLEGFA-----DRKPHQLSGGQQQRVALARAL 151 (352)
T ss_pred --------------------------------CHHHHHHHHHHHHHHcCchhhh-----hhChhhhChHHHHHHHHHHHh
Confidence 0112334678899999998754 567889999999999999999
Q ss_pred hcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhhHHHHHHh
Q 000808 160 VGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVLDFFES 239 (1275)
Q Consensus 160 ~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~~~~~f~~ 239 (1275)
+.+|++||||||.|+||.+-+.++...++++.+.. +.+.+.++|+.+|++.++|||++|++|+|...|+++++-
T Consensus 152 ~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~-giT~i~VTHDqeEAl~msDrI~Vm~~G~I~Q~gtP~eiY----- 225 (352)
T COG3842 152 VPEPKVLLLDEPLSALDAKLREQMRKELKELQREL-GITFVYVTHDQEEALAMSDRIAVMNDGRIEQVGTPEEIY----- 225 (352)
T ss_pred hcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhc-CCeEEEEECCHHHHhhhccceEEccCCceeecCCHHHHh-----
Confidence 99999999999999999999999999999987765 566666899999999999999999999999999999983
Q ss_pred CCCCCCCCCChhhHHHh
Q 000808 240 MGFKCPERKGVADFLQE 256 (1275)
Q Consensus 240 ~G~~~p~~~~~ad~l~~ 256 (1275)
..|...-.|+|+-+
T Consensus 226 ---~~P~~~fVA~FiG~ 239 (352)
T COG3842 226 ---ERPATRFVADFIGE 239 (352)
T ss_pred ---hCcchHHHHHHhCc
Confidence 45665556676643
No 123
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.7e-37 Score=338.87 Aligned_cols=213 Identities=27% Similarity=0.385 Sum_probs=179.0
Q ss_pred EEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCCc
Q 000808 679 TFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 758 (1275)
Q Consensus 679 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 758 (1275)
+++|++++++ +.+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~------------~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~ 67 (242)
T cd03295 2 EFENVTKRYG------------GGKKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIE--PTSGEIFIDGEDIRE 67 (242)
T ss_pred EEEEEEEEeC------------CcceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCeEcCc
Confidence 5678887763 11459999999999999999999999999999999999865 347999999987542
Q ss_pred ---ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCc--cccccccCCCCCCCCHH
Q 000808 759 ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNP--LRQSLVGLPGESGLSTE 833 (1275)
Q Consensus 759 ---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~--~~~~~~~~~~~~~lSgG 833 (1275)
...++.++|++|++.+++.+|++||+.+...++ ..+.++..+.++++++.+++.+ ..++.+ +.||||
T Consensus 68 ~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~-----~~LS~G 139 (242)
T cd03295 68 QDPVELRRKIGYVIQQIGLFPHMTVEENIALVPKLL---KWPKEKIRERADELLALVGLDPAEFADRYP-----HELSGG 139 (242)
T ss_pred CChHHhhcceEEEccCccccCCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCCcHHHHhcCh-----hhCCHH
Confidence 233567899999999999999999998765433 1233444567889999999985 555554 579999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhhhhheeecCcEEEEE
Q 000808 834 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYV 912 (1275)
Q Consensus 834 erqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~ 912 (1275)
||||++|||+|+.+|++++|||||+|||+.++..+.+.|++++++ |+|||++||+++ ++.+.+|++++|.+ |++++.
T Consensus 140 ~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~-~~~~~~d~i~~l~~-G~i~~~ 217 (242)
T cd03295 140 QQQRVGVARALAADPPLLLMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDID-EAFRLADRIAIMKN-GEIVQV 217 (242)
T ss_pred HHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEe
Confidence 999999999999999999999999999999999999999998764 899999999985 56788999999986 789998
Q ss_pred CCC
Q 000808 913 GPL 915 (1275)
Q Consensus 913 g~~ 915 (1275)
|+.
T Consensus 218 ~~~ 220 (242)
T cd03295 218 GTP 220 (242)
T ss_pred cCH
Confidence 875
No 124
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=8.9e-37 Score=332.82 Aligned_cols=206 Identities=26% Similarity=0.366 Sum_probs=173.3
Q ss_pred EEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCCc
Q 000808 679 TFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 758 (1275)
Q Consensus 679 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 758 (1275)
+++|+++.++ +++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++..
T Consensus 2 ~~~~l~~~~~------------~~~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~i~~ 67 (214)
T cd03292 2 EFINVTKTYP------------NGTAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEEL--PTSGTIRVNGQDVSD 67 (214)
T ss_pred EEEEEEEEeC------------CCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEccc
Confidence 5678887763 12469999999999999999999999999999999999865 348999999987542
Q ss_pred c------cccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCH
Q 000808 759 E------TFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLST 832 (1275)
Q Consensus 759 ~------~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSg 832 (1275)
. ..++.++|++|++.+++.+|++||+.+....+. ...++.+++++++++.+|+.+..++.+ ..|||
T Consensus 68 ~~~~~~~~~~~~i~~v~q~~~~~~~~t~~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~ 139 (214)
T cd03292 68 LRGRAIPYLRRKIGVVFQDFRLLPDRNVYENVAFALEVTG---VPPREIRKRVPAALELVGLSHKHRALP-----AELSG 139 (214)
T ss_pred CCHHHHHHHHHheEEEecCchhccCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHhhCCh-----hhcCH
Confidence 1 235679999999999999999999988754331 233444567889999999987776665 47999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcE
Q 000808 833 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQ 908 (1275)
Q Consensus 833 Gerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~ 908 (1275)
|||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++.++|+|||+++|+++ .+.+.+|++++|++ |+
T Consensus 140 G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~-~~~~~~d~i~~l~~-G~ 213 (214)
T cd03292 140 GEQQRVAIARAIVNSPTILIADEPTGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKE-LVDTTRHRVIALER-GK 213 (214)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEeC-Cc
Confidence 9999999999999999999999999999999999999999998777899999999975 46668999999986 54
No 125
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=5.8e-37 Score=341.09 Aligned_cols=218 Identities=25% Similarity=0.285 Sum_probs=178.1
Q ss_pred EEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCC
Q 000808 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1275)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 757 (1275)
++++|+++++. .++++|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~------------~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 67 (243)
T TIGR02315 2 LEVENLSKVYP------------NGKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVE--PSSGSILLEGTDIT 67 (243)
T ss_pred eEEEeeeeecC------------CCcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCccEEEECCEEhh
Confidence 46788877652 12459999999999999999999999999999999999865 34899999998754
Q ss_pred c------ccccceEEEeccCCCCCCCCCHHHHHHHHHhccC-----CCCCCHHHHHHHHHHHHHHcCCCccccccccCCC
Q 000808 758 Q------ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRL-----PPEVDSETQKMFIEEIMELVELNPLRQSLVGLPG 826 (1275)
Q Consensus 758 ~------~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~-----~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~ 826 (1275)
. ..+++.++|++|++.+++.+||+||+.+...... .......+.+++++++++.+|+.+..+..+
T Consensus 68 ~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~---- 143 (243)
T TIGR02315 68 KLRGKKLRKLRRRIGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLADKAYQRA---- 143 (243)
T ss_pred hCCHHHHHHHHhheEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcHhhhcCCc----
Confidence 2 1235679999999999999999999976421100 001112234566888999999987766654
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhhhhheeec
Q 000808 827 ESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDELFLMKR 905 (1275)
Q Consensus 827 ~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~ 905 (1275)
..||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||++||+++ .+.+.+|++++|++
T Consensus 144 -~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~-~~~~~~d~v~~l~~ 221 (243)
T TIGR02315 144 -DQLSGGQQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVD-LAKKYADRIVGLKA 221 (243)
T ss_pred -ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEEEEEC
Confidence 479999999999999999999999999999999999999999999998754 899999999986 46678999999986
Q ss_pred CcEEEEECCCC
Q 000808 906 GGQEIYVGPLG 916 (1275)
Q Consensus 906 gg~~~~~g~~~ 916 (1275)
|+++..|+++
T Consensus 222 -G~i~~~~~~~ 231 (243)
T TIGR02315 222 -GEIVFDGAPS 231 (243)
T ss_pred -CEEEecCCHH
Confidence 7899888764
No 126
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.7e-37 Score=301.53 Aligned_cols=201 Identities=26% Similarity=0.391 Sum_probs=178.0
Q ss_pred cceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCCcccccceEEEeccCCCCCCCCCHHH
Q 000808 703 LMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQETFTRISGYCEQNDIHSPFVTVYE 782 (1275)
Q Consensus 703 ~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~~~~~~~~~~v~q~~~~~~~ltv~e 782 (1275)
..+|+|+|++|.+||.++++||||||||||||+++|..+ +..|+|.+||.+++...- .-|.|+|++.++|.+|+.|
T Consensus 18 ~~~le~vsL~ia~ge~vv~lGpSGcGKTTLLnl~AGf~~--P~~G~i~l~~r~i~gPga--ergvVFQ~~~LlPWl~~~d 93 (259)
T COG4525 18 RSALEDVSLTIASGELVVVLGPSGCGKTTLLNLIAGFVT--PSRGSIQLNGRRIEGPGA--ERGVVFQNEALLPWLNVID 93 (259)
T ss_pred hhhhhccceeecCCCEEEEEcCCCccHHHHHHHHhcCcC--cccceEEECCEeccCCCc--cceeEeccCccchhhHHHH
Confidence 359999999999999999999999999999999999877 458999999998764322 2389999999999999999
Q ss_pred HHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCH
Q 000808 783 SLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA 862 (1275)
Q Consensus 783 ~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~ 862 (1275)
|+.|+..++ ..++.++.+++.+.+..+||.+..++.+ -+||||||||+.|||||+.+|+.|+||||.++||.
T Consensus 94 NvafgL~l~---Gi~k~~R~~~a~q~l~~VgL~~~~~~~i-----~qLSGGmrQRvGiARALa~eP~~LlLDEPfgAlDa 165 (259)
T COG4525 94 NVAFGLQLR---GIEKAQRREIAHQMLALVGLEGAEHKYI-----WQLSGGMRQRVGIARALAVEPQLLLLDEPFGALDA 165 (259)
T ss_pred HHHHHHHhc---CCCHHHHHHHHHHHHHHhCcccccccce-----EeecchHHHHHHHHHHhhcCcceEeecCchhhHHH
Confidence 999999887 4678888899999999999999887776 47999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhh-CCCEEEEEecCCCHHHHHhhhhhheeecC-cEEEEECCCC
Q 000808 863 RAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFESFDELFLMKRG-GQEIYVGPLG 916 (1275)
Q Consensus 863 ~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~~~~l~~g-g~~~~~g~~~ 916 (1275)
-+++.++++|-++.+ .|+.++++||+.+ +..-+.+++++|+.| |+++.-=+++
T Consensus 166 ~tRe~mQelLldlw~~tgk~~lliTH~ie-EAlflatrLvvlsp~pgRvv~~~~~d 220 (259)
T COG4525 166 LTREQMQELLLDLWQETGKQVLLITHDIE-EALFLATRLVVLSPGPGRVVERLPLD 220 (259)
T ss_pred HHHHHHHHHHHHHHHHhCCeEEEEeccHH-HHHhhhheeEEecCCCceeeEecCCC
Confidence 999999999988765 5999999999987 455678999999853 6787776663
No 127
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=1.4e-36 Score=339.24 Aligned_cols=214 Identities=26% Similarity=0.357 Sum_probs=180.1
Q ss_pred EEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCC
Q 000808 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1275)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 757 (1275)
++++|+++.+. ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 68 (250)
T PRK11264 4 IEVKNLVKKFH-------------GQTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQ--PEAGTIRVGDITID 68 (250)
T ss_pred EEEeceEEEEC-------------CeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCeEEEECCEEcc
Confidence 77889988763 2359999999999999999999999999999999999865 34799999998753
Q ss_pred c-----------ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCC
Q 000808 758 Q-----------ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPG 826 (1275)
Q Consensus 758 ~-----------~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~ 826 (1275)
. ...++.++|++|++.+++.+|++||+.+...... ....++..++++++++.+|+.+..+..+
T Consensus 69 ~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~~---- 142 (250)
T PRK11264 69 TARSLSQQKGLIRQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVK--GEPKEEATARARELLAKVGLAGKETSYP---- 142 (250)
T ss_pred ccccccchhhHHHHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCcchhhCCh----
Confidence 2 1234578999999999989999999987543111 1233444566889999999987766654
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecC
Q 000808 827 ESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRG 906 (1275)
Q Consensus 827 ~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~g 906 (1275)
+.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|+++ ++.+.+|++++|++
T Consensus 143 -~~LS~Gq~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~-~~~~~~d~i~~l~~- 219 (250)
T PRK11264 143 -RRLSGGQQQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMS-FARDVADRAIFMDQ- 219 (250)
T ss_pred -hhCChHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEEC-
Confidence 479999999999999999999999999999999999999999999998877999999999975 56678999999986
Q ss_pred cEEEEECCC
Q 000808 907 GQEIYVGPL 915 (1275)
Q Consensus 907 g~~~~~g~~ 915 (1275)
|++++.|+.
T Consensus 220 G~i~~~~~~ 228 (250)
T PRK11264 220 GRIVEQGPA 228 (250)
T ss_pred CEEEEeCCH
Confidence 789998875
No 128
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-36 Score=342.57 Aligned_cols=215 Identities=25% Similarity=0.343 Sum_probs=180.8
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 756 (1275)
-++++|+++.++ +++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~------------~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~ 69 (274)
T PRK13647 4 IIEVEDLHFRYK------------DGTKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYL--PQRGRVKVMGREV 69 (274)
T ss_pred eEEEEEEEEEeC------------CCCeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCceEEEECCEEC
Confidence 478999998773 12359999999999999999999999999999999999865 3489999999876
Q ss_pred Cc---ccccceEEEeccCCC-CCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCH
Q 000808 757 KQ---ETFTRISGYCEQNDI-HSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLST 832 (1275)
Q Consensus 757 ~~---~~~~~~~~~v~q~~~-~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSg 832 (1275)
.. ...++.+||++|++. .++..||.||+.|..... ..+..+.+++++++++.+||.+..++.+ ..|||
T Consensus 70 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~LSg 141 (274)
T PRK13647 70 NAENEKWVRSKVGLVFQDPDDQVFSSTVWDDVAFGPVNM---GLDKDEVERRVEEALKAVRMWDFRDKPP-----YHLSY 141 (274)
T ss_pred CCCCHHHHHhhEEEEecChhhhhccCcHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHHHhcCCh-----hhCCH
Confidence 43 223457999999963 445689999998764321 2334444567889999999988777765 46999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcEEEEE
Q 000808 833 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYV 912 (1275)
Q Consensus 833 Gerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~ 912 (1275)
|||||++|||||+.+|++|+|||||+|||+.++..+.+.|++++++|+|||++||+++ .+.+.+|++++|++ |++++.
T Consensus 142 G~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~-~~~~~~d~i~~l~~-G~i~~~ 219 (274)
T PRK13647 142 GQKKRVAIAGVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVD-LAAEWADQVIVLKE-GRVLAE 219 (274)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEE
Confidence 9999999999999999999999999999999999999999999877999999999975 46678999999986 789999
Q ss_pred CCC
Q 000808 913 GPL 915 (1275)
Q Consensus 913 g~~ 915 (1275)
|++
T Consensus 220 g~~ 222 (274)
T PRK13647 220 GDK 222 (274)
T ss_pred CCH
Confidence 986
No 129
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=1e-36 Score=334.44 Aligned_cols=210 Identities=28% Similarity=0.414 Sum_probs=174.7
Q ss_pred EEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCCc
Q 000808 679 TFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 758 (1275)
Q Consensus 679 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 758 (1275)
+++|++++++ ++++|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~ 66 (222)
T cd03224 2 EVENLNAGYG-------------KSQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLP--PRSGSIRFDGRDITG 66 (222)
T ss_pred EEeeEEeecC-------------CeeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcCC
Confidence 5778877653 2369999999999999999999999999999999999865 347999999987543
Q ss_pred c----cccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHc-CCCccccccccCCCCCCCCHH
Q 000808 759 E----TFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELV-ELNPLRQSLVGLPGESGLSTE 833 (1275)
Q Consensus 759 ~----~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l-~l~~~~~~~~~~~~~~~lSgG 833 (1275)
. ..++.++|++|++.+++.+|++||+.+...... ..+.++.++++++.+ ++.+..++.+ +.||||
T Consensus 67 ~~~~~~~~~~i~~~~q~~~~~~~~t~~~~l~~~~~~~~-----~~~~~~~~~~~l~~~~~l~~~~~~~~-----~~LS~G 136 (222)
T cd03224 67 LPPHERARAGIGYVPEGRRIFPELTVEENLLLGAYARR-----RAKRKARLERVYELFPRLKERRKQLA-----GTLSGG 136 (222)
T ss_pred CCHHHHHhcCeEEeccccccCCCCcHHHHHHHHhhhcC-----chhHHHHHHHHHHHHHhhhhhhhCch-----hhCCHH
Confidence 1 124568999999999999999999988654321 122344567778887 4666556554 469999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcEEEEEC
Q 000808 834 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVG 913 (1275)
Q Consensus 834 erqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g 913 (1275)
||||++|||+|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|+++ ++...+|++++|.+ |+++..|
T Consensus 137 ~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~ 214 (222)
T cd03224 137 EQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNAR-FALEIADRAYVLER-GRVVLEG 214 (222)
T ss_pred HHHHHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhccEEEEeeC-CeEEEeC
Confidence 999999999999999999999999999999999999999998777899999999975 56788999999986 7899888
Q ss_pred CC
Q 000808 914 PL 915 (1275)
Q Consensus 914 ~~ 915 (1275)
+.
T Consensus 215 ~~ 216 (222)
T cd03224 215 TA 216 (222)
T ss_pred CH
Confidence 75
No 130
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-36 Score=345.22 Aligned_cols=219 Identities=24% Similarity=0.298 Sum_probs=180.2
Q ss_pred EEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCC
Q 000808 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1275)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 757 (1275)
++++|+++.++... .....+|+|||++|++||+++|+||||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 3 i~~~~l~~~y~~~~--------~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p--~~G~i~~~g~~~~ 72 (305)
T PRK13651 3 IKVKNIVKIFNKKL--------PTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLP--DTGTIEWIFKDEK 72 (305)
T ss_pred EEEEEEEEEECCCC--------CccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCC--CCcEEEEeceecc
Confidence 77899998874110 0123599999999999999999999999999999999998663 4799999876531
Q ss_pred ---------------------------cccccceEEEeccCC-CCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHH
Q 000808 758 ---------------------------QETFTRISGYCEQND-IHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIM 809 (1275)
Q Consensus 758 ---------------------------~~~~~~~~~~v~q~~-~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l 809 (1275)
....++.+||++|++ ..+...||+|++.|..... ..+.++.++++++++
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l 149 (305)
T PRK13651 73 NKKKTKEKEKVLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSM---GVSKEEAKKRAAKYI 149 (305)
T ss_pred cccccccccccccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHc---CCCHHHHHHHHHHHH
Confidence 112356799999985 2334579999998865432 234555667789999
Q ss_pred HHcCCC-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecC
Q 000808 810 ELVELN-PLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQ 888 (1275)
Q Consensus 810 ~~l~l~-~~~~~~~~~~~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~ 888 (1275)
+.+||. +..+..+ ..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|+
T Consensus 150 ~~~gL~~~~~~~~~-----~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd 224 (305)
T PRK13651 150 ELVGLDESYLQRSP-----FELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHD 224 (305)
T ss_pred HHcCCChhhhhCCh-----hhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeC
Confidence 999996 5666654 4799999999999999999999999999999999999999999999998779999999999
Q ss_pred CCHHHHHhhhhhheeecCcEEEEECCCC
Q 000808 889 PSIDIFESFDELFLMKRGGQEIYVGPLG 916 (1275)
Q Consensus 889 ~~~~~~~~~d~~~~l~~gg~~~~~g~~~ 916 (1275)
++ .+.+.+|++++|++ |++++.|++.
T Consensus 225 ~~-~~~~~adrv~vl~~-G~i~~~g~~~ 250 (305)
T PRK13651 225 LD-NVLEWTKRTIFFKD-GKIIKDGDTY 250 (305)
T ss_pred HH-HHHHhCCEEEEEEC-CEEEEECCHH
Confidence 75 57788999999986 7999999874
No 131
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=2e-36 Score=340.56 Aligned_cols=216 Identities=20% Similarity=0.295 Sum_probs=181.5
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 756 (1275)
.++++|+++.+. ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 7 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i 71 (269)
T PRK11831 7 LVDMRGVSFTRG-------------NRCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIA--PDHGEILFDGENI 71 (269)
T ss_pred eEEEeCeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEc
Confidence 488999998763 2459999999999999999999999999999999999865 3489999999875
Q ss_pred Ccc------cccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCC
Q 000808 757 KQE------TFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGL 830 (1275)
Q Consensus 757 ~~~------~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~l 830 (1275)
... ..++.++|++|++.+++.+|+.||+.+...... ..+.+..++++.++++.+|+.+..+..+ ..|
T Consensus 72 ~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~L 144 (269)
T PRK11831 72 PAMSRSRLYTVRKRMSMLFQSGALFTDMNVFDNVAYPLREHT--QLPAPLLHSTVMMKLEAVGLRGAAKLMP-----SEL 144 (269)
T ss_pred cccChhhHHHHhhcEEEEecccccCCCCCHHHHHHHHHHHcc--CCCHHHHHHHHHHHHHHcCChhhhhCCh-----hhC
Confidence 421 124568999999999999999999987643211 1223334456788999999988777765 469
Q ss_pred CHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhhhhheeecCcEE
Q 000808 831 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDELFLMKRGGQE 909 (1275)
Q Consensus 831 SgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~ 909 (1275)
|||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|++. ++.+.+|++++|++ |++
T Consensus 145 SgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~-~~~~~~d~v~~l~~-G~i 222 (269)
T PRK11831 145 SGGMARRAALARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVP-EVLSIADHAYIVAD-KKI 222 (269)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhhCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999998765 899999999975 56788999999985 799
Q ss_pred EEECCCC
Q 000808 910 IYVGPLG 916 (1275)
Q Consensus 910 ~~~g~~~ 916 (1275)
++.|+++
T Consensus 223 ~~~g~~~ 229 (269)
T PRK11831 223 VAHGSAQ 229 (269)
T ss_pred EEeCCHH
Confidence 9999763
No 132
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-36 Score=343.58 Aligned_cols=218 Identities=25% Similarity=0.350 Sum_probs=180.5
Q ss_pred EEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCC
Q 000808 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1275)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 757 (1275)
++++|+++.++... ...+.+|+|||++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 2 i~~~~v~~~y~~~~--------~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~ 71 (288)
T PRK13643 2 IKFEKVNYTYQPNS--------PFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQ--PTEGKVTVGDIVVS 71 (288)
T ss_pred EEEEEEEEEeCCCC--------cccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCC--CCCcEEEECCEECc
Confidence 67899998884110 012359999999999999999999999999999999999876 34899999998863
Q ss_pred c-------ccccceEEEeccCC--CCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCC-ccccccccCCCC
Q 000808 758 Q-------ETFTRISGYCEQND--IHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELN-PLRQSLVGLPGE 827 (1275)
Q Consensus 758 ~-------~~~~~~~~~v~q~~--~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~~ 827 (1275)
. ...++.+||++|++ .+++ .||.|++.|..... ..+.++.++++.++++.++|. +..++.+
T Consensus 72 ~~~~~~~~~~~~~~ig~v~q~~~~~l~~-~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~~----- 142 (288)
T PRK13643 72 STSKQKEIKPVRKKVGVVFQFPESQLFE-ETVLKDVAFGPQNF---GIPKEKAEKIAAEKLEMVGLADEFWEKSP----- 142 (288)
T ss_pred cccccccHHHHHhhEEEEecCcchhccc-chHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCCChhhccCCc-----
Confidence 1 12456799999986 4454 69999999875422 234455667789999999996 4555554
Q ss_pred CCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCc
Q 000808 828 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGG 907 (1275)
Q Consensus 828 ~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg 907 (1275)
+.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||++||+++ ++.+.+|++++|++ |
T Consensus 143 ~~LSgGqkqrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~-~~~~~~dri~~l~~-G 220 (288)
T PRK13643 143 FELSGGQMRRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMD-DVADYADYVYLLEK-G 220 (288)
T ss_pred ccCCHHHHHHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEEEEEC-C
Confidence 579999999999999999999999999999999999999999999998777999999999985 56688999999986 7
Q ss_pred EEEEECCCC
Q 000808 908 QEIYVGPLG 916 (1275)
Q Consensus 908 ~~~~~g~~~ 916 (1275)
++++.|+++
T Consensus 221 ~i~~~g~~~ 229 (288)
T PRK13643 221 HIISCGTPS 229 (288)
T ss_pred EEEEECCHH
Confidence 999999874
No 133
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.4e-36 Score=330.23 Aligned_cols=208 Identities=33% Similarity=0.489 Sum_probs=174.6
Q ss_pred EEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCCc
Q 000808 679 TFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 758 (1275)
Q Consensus 679 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 758 (1275)
+++|+++.+. ++.+|+|+|+++++| +++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~~~~~~~-------------~~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~ 65 (211)
T cd03264 2 QLENLTKRYG-------------KKRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTP--PSSGTIRIDGQDVLK 65 (211)
T ss_pred EEEEEEEEEC-------------CEEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCC--CCccEEEECCCcccc
Confidence 5778887763 235999999999999 999999999999999999999865 348999999987542
Q ss_pred --ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHH
Q 000808 759 --ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRK 836 (1275)
Q Consensus 759 --~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerq 836 (1275)
...++.++|++|++.+++.+||.||+.+....+ ....++.++.++++++.+++.+..++.+ ..|||||||
T Consensus 66 ~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 137 (211)
T cd03264 66 QPQKLRRRIGYLPQEFGVYPNFTVREFLDYIAWLK---GIPSKEVKARVDEVLELVNLGDRAKKKI-----GSLSGGMRR 137 (211)
T ss_pred chHHHHhheEEecCCCcccccCCHHHHHHHHHHHh---CCCHHHHHHHHHHHHHHCCCHHHHhCch-----hhCCHHHHH
Confidence 123567899999999999999999998765443 1223334556889999999987777665 469999999
Q ss_pred HHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcEEEEEC
Q 000808 837 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVG 913 (1275)
Q Consensus 837 rv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g 913 (1275)
|++|||+|+.+|++++|||||+|||+.++..+.+.|+++++ ++|||+++|+++ .+.+.+|++++|++ |+++..|
T Consensus 138 rv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~vsH~~~-~~~~~~d~i~~l~~-g~i~~~g 211 (211)
T cd03264 138 RVGIAQALVGDPSILIVDEPTAGLDPEERIRFRNLLSELGE-DRIVILSTHIVE-DVESLCNQVAVLNK-GKLVFEG 211 (211)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC-CCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEecC
Confidence 99999999999999999999999999999999999999876 599999999985 46678999999986 7887654
No 134
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=2.4e-36 Score=330.89 Aligned_cols=208 Identities=24% Similarity=0.315 Sum_probs=174.2
Q ss_pred EEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCC
Q 000808 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1275)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 757 (1275)
++++|+++.+. +++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~i~ 67 (222)
T PRK10908 2 IRFEHVSKAYL------------GGRQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIER--PSAGKIWFSGHDIT 67 (222)
T ss_pred EEEEeeEEEec------------CCCeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcc
Confidence 56788887762 12369999999999999999999999999999999999865 34899999998754
Q ss_pred cc------cccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCC
Q 000808 758 QE------TFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLS 831 (1275)
Q Consensus 758 ~~------~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lS 831 (1275)
.. .+++.++|++|++.+++.+|++||+.+....+ ....++.++.++++++.+++.+..++.+ ..||
T Consensus 68 ~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 139 (222)
T PRK10908 68 RLKNREVPFLRRQIGMIFQDHHLLMDRTVYDNVAIPLIIA---GASGDDIRRRVSAALDKVGLLDKAKNFP-----IQLS 139 (222)
T ss_pred cCChhHHHHHHhheEEEecCccccccccHHHHHHhHHHhc---CCCHHHHHHHHHHHHHHcCChhhhhCCc-----hhCC
Confidence 21 13567899999998888899999998865432 1233444556788999999987766654 4699
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcEE
Q 000808 832 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQE 909 (1275)
Q Consensus 832 gGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~ 909 (1275)
||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|+++ ++...+|++++|++ |++
T Consensus 140 ~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i 215 (222)
T PRK10908 140 GGEQQRVGIARAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIG-LISRRSYRMLTLSD-GHL 215 (222)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEE
Confidence 99999999999999999999999999999999999999999998777899999999986 46678899999986 664
No 135
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-36 Score=346.19 Aligned_cols=220 Identities=23% Similarity=0.322 Sum_probs=180.9
Q ss_pred cEEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCcc
Q 000808 676 HSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 755 (1275)
Q Consensus 676 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~ 755 (1275)
..++++|+++.++... ...+.+|+|||++|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.+
T Consensus 20 ~~l~~~nl~~~y~~~~--------~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~--p~~G~I~i~g~~ 89 (320)
T PRK13631 20 IILRVKNLYCVFDEKQ--------ENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIK--SKYGTIQVGDIY 89 (320)
T ss_pred ceEEEEeEEEEeCCCC--------cccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCeEEECCEE
Confidence 3589999999885210 012459999999999999999999999999999999999876 348999999976
Q ss_pred CCc-------------------ccccceEEEeccCC--CCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCC
Q 000808 756 KKQ-------------------ETFTRISGYCEQND--IHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVEL 814 (1275)
Q Consensus 756 ~~~-------------------~~~~~~~~~v~q~~--~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l 814 (1275)
... ...++.+|||+|++ .+++ .|++||+.|+.... ..+.++..++++++++.+||
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~-~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL 165 (320)
T PRK13631 90 IGDKKNNHELITNPYSKKIKNFKELRRRVSMVFQFPEYQLFK-DTIEKDIMFGPVAL---GVKKSEAKKLAKFYLNKMGL 165 (320)
T ss_pred cccccccccccccccccccchHHHHHhcEEEEEECchhcccc-chHHHHHHhhHHhc---CCCHHHHHHHHHHHHHHcCC
Confidence 532 13456799999986 4555 59999998864321 22344455678899999999
Q ss_pred C-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHH
Q 000808 815 N-PLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDI 893 (1275)
Q Consensus 815 ~-~~~~~~~~~~~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~ 893 (1275)
. +..+..+ ..||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||++||+++ .+
T Consensus 166 ~~~~~~~~~-----~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~-~~ 239 (320)
T PRK13631 166 DDSYLERSP-----FGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTME-HV 239 (320)
T ss_pred ChhHhcCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HH
Confidence 6 4555543 579999999999999999999999999999999999999999999998777999999999975 46
Q ss_pred HHhhhhhheeecCcEEEEECCCC
Q 000808 894 FESFDELFLMKRGGQEIYVGPLG 916 (1275)
Q Consensus 894 ~~~~d~~~~l~~gg~~~~~g~~~ 916 (1275)
.+.+|++++|++ |+++..|++.
T Consensus 240 ~~~adri~vl~~-G~i~~~g~~~ 261 (320)
T PRK13631 240 LEVADEVIVMDK-GKILKTGTPY 261 (320)
T ss_pred HHhCCEEEEEEC-CEEEEeCCHH
Confidence 688999999996 7999999863
No 136
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-36 Score=335.86 Aligned_cols=206 Identities=22% Similarity=0.277 Sum_probs=176.3
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 756 (1275)
.++++|+++++. ++.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 12 ~l~i~~l~~~~~-------------~~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~--p~~G~i~~~g~~~ 76 (257)
T PRK11247 12 PLLLNAVSKRYG-------------ERTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLET--PSAGELLAGTAPL 76 (257)
T ss_pred cEEEEEEEEEEC-------------CcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCeEEEECCEEH
Confidence 589999998873 2469999999999999999999999999999999999865 3479999998765
Q ss_pred CcccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHH
Q 000808 757 KQETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRK 836 (1275)
Q Consensus 757 ~~~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerq 836 (1275)
. ..++.++|++|++.+++.+||+||+.+... . ..+++++++++.+|+.+..+..+ ..|||||||
T Consensus 77 ~--~~~~~i~~v~q~~~l~~~~tv~enl~~~~~-----~----~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgGqkq 140 (257)
T PRK11247 77 A--EAREDTRLMFQDARLLPWKKVIDNVGLGLK-----G----QWRDAALQALAAVGLADRANEWP-----AALSGGQKQ 140 (257)
T ss_pred H--HhhCceEEEecCccCCCCCcHHHHHHhccc-----c----hHHHHHHHHHHHcCChhHhcCCh-----hhCCHHHHH
Confidence 3 235678999999999898999999987421 0 12345788999999987766664 479999999
Q ss_pred HHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhh-CCCEEEEEecCCCHHHHHhhhhhheeecCcEEEEECCC
Q 000808 837 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVGPL 915 (1275)
Q Consensus 837 rv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 915 (1275)
|++|||+|+.+|++++|||||+|||+.++..+.+.|+++.+ .|+|||+++|+++ .+.+.+|++++|.+ |++++.|+.
T Consensus 141 rl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~-~~~~~~d~i~~l~~-G~i~~~~~~ 218 (257)
T PRK11247 141 RVALARALIHRPGLLLLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVS-EAVAMADRVLLIEE-GKIGLDLTV 218 (257)
T ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEeeccc
Confidence 99999999999999999999999999999999999999865 4899999999976 46678999999986 788888765
No 137
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-36 Score=343.09 Aligned_cols=218 Identities=26% Similarity=0.305 Sum_probs=180.2
Q ss_pred EEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCC
Q 000808 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1275)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 757 (1275)
++++|++++++... ...+++|+|||++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 3 l~~~~l~~~y~~~~--------~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~ 72 (290)
T PRK13634 3 ITFQKVEHRYQYKT--------PFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQ--PTSGTVTIGERVIT 72 (290)
T ss_pred EEEEEEEEEECCCC--------cccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCCcEEEECCEECc
Confidence 78899998884210 012469999999999999999999999999999999999866 34799999998763
Q ss_pred c-------ccccceEEEeccCC--CCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCC-ccccccccCCCC
Q 000808 758 Q-------ETFTRISGYCEQND--IHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELN-PLRQSLVGLPGE 827 (1275)
Q Consensus 758 ~-------~~~~~~~~~v~q~~--~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~~ 827 (1275)
. ...++.+||++|++ .++ ..||+||+.|..... ..+.++.+++++++++.+||. +..++.+
T Consensus 73 ~~~~~~~~~~~~~~ig~v~q~~~~~l~-~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~----- 143 (290)
T PRK13634 73 AGKKNKKLKPLRKKVGIVFQFPEHQLF-EETVEKDICFGPMNF---GVSEEDAKQKAREMIELVGLPEELLARSP----- 143 (290)
T ss_pred cccccchHHHHHhhEEEEeeCchhhhh-hhhHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHCCCChhhhhCCc-----
Confidence 1 13456799999986 344 479999998875322 233444556789999999996 5566654
Q ss_pred CCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhhhhheeecC
Q 000808 828 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDELFLMKRG 906 (1275)
Q Consensus 828 ~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~g 906 (1275)
+.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|++++++ |.|||++||+++ ++.+.+|++++|.+
T Consensus 144 ~~LSgGq~qrv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~-~~~~~~drv~~l~~- 221 (290)
T PRK13634 144 FELSGGQMRRVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSME-DAARYADQIVVMHK- 221 (290)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-
Confidence 479999999999999999999999999999999999999999999998764 899999999986 57788999999985
Q ss_pred cEEEEECCCC
Q 000808 907 GQEIYVGPLG 916 (1275)
Q Consensus 907 g~~~~~g~~~ 916 (1275)
|++++.|++.
T Consensus 222 G~i~~~g~~~ 231 (290)
T PRK13634 222 GTVFLQGTPR 231 (290)
T ss_pred CEEEEECCHH
Confidence 7999999863
No 138
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=3.6e-36 Score=332.57 Aligned_cols=212 Identities=27% Similarity=0.390 Sum_probs=177.3
Q ss_pred EEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCC
Q 000808 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1275)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 757 (1275)
++++|++++++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~i~ 66 (236)
T TIGR03864 2 LEVAGLSFAYG-------------ARRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYV--AQEGQISVAGHDLR 66 (236)
T ss_pred EEEEeeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCEEcc
Confidence 56788887763 2459999999999999999999999999999999999865 34899999998754
Q ss_pred cc--cccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHH
Q 000808 758 QE--TFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQR 835 (1275)
Q Consensus 758 ~~--~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGer 835 (1275)
.. ...+.++|++|++.+++.+|++||+.+....+ ....++..+.++++++.+|+.+..++.+ ..||||||
T Consensus 67 ~~~~~~~~~i~~~~q~~~~~~~~t~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~ 138 (236)
T TIGR03864 67 RAPRAALARLGVVFQQPTLDLDLSVRQNLRYHAALH---GLSRAEARERIAALLARLGLAERADDKV-----RELNGGHR 138 (236)
T ss_pred cCChhhhhhEEEeCCCCCCcccCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCChhhhcCCh-----hhCCHHHH
Confidence 21 22346899999998888999999998765432 1233344556888999999987776665 46999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhh-CCCEEEEEecCCCHHHHHhhhhhheeecCcEEEEECC
Q 000808 836 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVGP 914 (1275)
Q Consensus 836 qrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~ 914 (1275)
||++|||+|+.+|++++|||||+|||+.++..+.+.|+++++ +|+|||+++|+++. + ..+|++++|++ |+++..|+
T Consensus 139 qrl~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~-~-~~~d~i~~l~~-G~i~~~~~ 215 (236)
T TIGR03864 139 RRVEIARALLHRPALLLLDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVDE-I-EADDRLVVLHR-GRVLADGA 215 (236)
T ss_pred HHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChhh-H-hhCCEEEEEeC-CeEEEeCC
Confidence 999999999999999999999999999999999999999875 58999999999863 4 45999999986 78898887
Q ss_pred C
Q 000808 915 L 915 (1275)
Q Consensus 915 ~ 915 (1275)
+
T Consensus 216 ~ 216 (236)
T TIGR03864 216 A 216 (236)
T ss_pred H
Confidence 5
No 139
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=3.4e-36 Score=335.22 Aligned_cols=214 Identities=24% Similarity=0.318 Sum_probs=177.8
Q ss_pred EEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCc---eEEEEEEEcCc
Q 000808 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITISGY 754 (1275)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~---~~~G~i~~~g~ 754 (1275)
++++|+++++. ++.+++|+|+++++||+++|+|+||||||||+++|+|..++. ..+|+|.++|.
T Consensus 2 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~ 68 (247)
T TIGR00972 2 IEIENLNLFYG-------------EKEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQ 68 (247)
T ss_pred EEEEEEEEEEC-------------CeeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCE
Confidence 56888888763 235999999999999999999999999999999999976521 12799999998
Q ss_pred cCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCC----ccccccccCC
Q 000808 755 PKKQ-----ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELN----PLRQSLVGLP 825 (1275)
Q Consensus 755 ~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~----~~~~~~~~~~ 825 (1275)
+... ...++.++|++|++.+++ +|++||+.+....+. .....+.++.++++++.+|+. +..+..+
T Consensus 69 ~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~--- 142 (247)
T TIGR00972 69 DIYDKKIDVVELRRRVGMVFQKPNPFP-MSIYDNIAYGPRLHG--IKDKKELDEIVEESLKKAALWDEVKDRLHDSA--- 142 (247)
T ss_pred EccccccchHHHHhheEEEecCcccCC-CCHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCCcchhhHhhCCc---
Confidence 7642 123567999999998888 999999988654331 122344456788999999997 4455543
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeec
Q 000808 826 GESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKR 905 (1275)
Q Consensus 826 ~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~ 905 (1275)
..||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++++ ++|||+++|+++ ++.+.+|++++|++
T Consensus 143 --~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~~~~~~d~i~~l~~ 218 (247)
T TIGR00972 143 --LGLSGGQQQRLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKK-KYTIVIVTHNMQ-QAARISDRTAFFYD 218 (247)
T ss_pred --ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-cCeEEEEecCHH-HHHHhCCEEEEEEC
Confidence 57999999999999999999999999999999999999999999999876 489999999985 56788999999996
Q ss_pred CcEEEEECCC
Q 000808 906 GGQEIYVGPL 915 (1275)
Q Consensus 906 gg~~~~~g~~ 915 (1275)
|++++.|++
T Consensus 219 -G~i~~~~~~ 227 (247)
T TIGR00972 219 -GELVEYGPT 227 (247)
T ss_pred -CEEEEeCCH
Confidence 789999876
No 140
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=1.5e-36 Score=330.70 Aligned_cols=206 Identities=24% Similarity=0.348 Sum_probs=173.2
Q ss_pred EEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCCc
Q 000808 679 TFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 758 (1275)
Q Consensus 679 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 758 (1275)
+++|++++++ ++.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~ 66 (213)
T cd03262 2 EIKNLHKSFG-------------DFHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEE--PDSGTIIIDGLKLTD 66 (213)
T ss_pred EEEEEEEEEC-------------CeEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEECCc
Confidence 5778887763 2459999999999999999999999999999999999865 348999999987632
Q ss_pred -----ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHH
Q 000808 759 -----ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTE 833 (1275)
Q Consensus 759 -----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgG 833 (1275)
...++.++|++|++.+++.+|+.||+.+...... ..+.++.+++++++++.+|+.+..++.+ ..||||
T Consensus 67 ~~~~~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G 139 (213)
T cd03262 67 DKKNINELRQKVGMVFQQFNLFPHLTVLENITLAPIKVK--GMSKAEAEERALELLEKVGLADKADAYP-----AQLSGG 139 (213)
T ss_pred cchhHHHHHhcceEEecccccCCCCcHHHHHHhHHHHhc--CCCHHHHHHHHHHHHHHcCCHhHhhhCc-----cccCHH
Confidence 1245679999999999999999999987642111 1233444567889999999987767665 479999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcE
Q 000808 834 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQ 908 (1275)
Q Consensus 834 erqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~ 908 (1275)
||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|++++|++ |+
T Consensus 140 ~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~-~~~~~~d~i~~l~~-g~ 212 (213)
T cd03262 140 QQQRVAIARALAMNPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMG-FAREVADRVIFMDD-GR 212 (213)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEeC-Cc
Confidence 999999999999999999999999999999999999999998877899999999985 56678999999986 54
No 141
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-36 Score=335.81 Aligned_cols=215 Identities=27% Similarity=0.368 Sum_probs=180.9
Q ss_pred EEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCC
Q 000808 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1275)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 757 (1275)
++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 68 (241)
T PRK10895 4 LTAKNLAKAYK-------------GRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVP--RDAGNIIIDDEDIS 68 (241)
T ss_pred EEEeCcEEEeC-------------CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEECC
Confidence 67888887763 2469999999999999999999999999999999999865 34799999998764
Q ss_pred cc----cccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHH
Q 000808 758 QE----TFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTE 833 (1275)
Q Consensus 758 ~~----~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgG 833 (1275)
.. ..++.++|++|++.+++.+|+.||+.+....+. ..+.++.+++++++++.+|+.+..+..+ +.||||
T Consensus 69 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G 141 (241)
T PRK10895 69 LLPLHARARRGIGYLPQEASIFRRLSVYDNLMAVLQIRD--DLSAEQREDRANELMEEFHIEHLRDSMG-----QSLSGG 141 (241)
T ss_pred CCCHHHHHHhCeEEeccCCcccccCcHHHHHhhhhhccc--ccCHHHHHHHHHHHHHHcCCHHHhhcch-----hhCCHH
Confidence 31 134568999999999998999999987643321 1223344567889999999987666654 479999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcEEEEEC
Q 000808 834 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVG 913 (1275)
Q Consensus 834 erqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g 913 (1275)
||||++|||+|+.+|++|+|||||+|||+.++..+.+.++++.++|+|||+++|+++ ++.+.+|++++|++ |++++.|
T Consensus 142 ~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~-~~~~~~d~v~~l~~-G~i~~~~ 219 (241)
T PRK10895 142 ERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVR-ETLAVCERAYIVSQ-GHLIAHG 219 (241)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHH-HHHHhcCEEEEEeC-CeEEeeC
Confidence 999999999999999999999999999999999999999998777999999999975 57788999999985 7899988
Q ss_pred CCC
Q 000808 914 PLG 916 (1275)
Q Consensus 914 ~~~ 916 (1275)
+++
T Consensus 220 ~~~ 222 (241)
T PRK10895 220 TPT 222 (241)
T ss_pred CHH
Confidence 763
No 142
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.9e-36 Score=341.29 Aligned_cols=216 Identities=26% Similarity=0.390 Sum_probs=181.7
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 756 (1275)
-++++|+++.+. +++.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~------------~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~--p~~G~i~i~g~~~ 70 (283)
T PRK13636 5 ILKVEELNYNYS------------DGTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILK--PSSGRILFDGKPI 70 (283)
T ss_pred eEEEEeEEEEeC------------CCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCccEEEECCEEC
Confidence 588999998873 12459999999999999999999999999999999999866 3589999999876
Q ss_pred Cc-----ccccceEEEeccCCC-CCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCC
Q 000808 757 KQ-----ETFTRISGYCEQNDI-HSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGL 830 (1275)
Q Consensus 757 ~~-----~~~~~~~~~v~q~~~-~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~l 830 (1275)
.. ..+++.+||++|++. .+...|++||+.+..... ..+.++.+++++++++.+||.+..++.+ +.|
T Consensus 71 ~~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~L 142 (283)
T PRK13636 71 DYSRKGLMKLRESVGMVFQDPDNQLFSASVYQDVSFGAVNL---KLPEDEVRKRVDNALKRTGIEHLKDKPT-----HCL 142 (283)
T ss_pred CCCcchHHHHHhhEEEEecCcchhhccccHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHCCChhhhhCCc-----ccC
Confidence 31 234567999999974 234579999998764322 2234445567899999999988777765 479
Q ss_pred CHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhhhhheeecCcEE
Q 000808 831 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDELFLMKRGGQE 909 (1275)
Q Consensus 831 SgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~ 909 (1275)
|||||||++|||||+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++...+|++++|++ |++
T Consensus 143 S~G~~qrl~laraL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~-~~~~~~dri~~l~~-G~i 220 (283)
T PRK13636 143 SFGQKKRVAIAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDID-IVPLYCDNVFVMKE-GRV 220 (283)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999998765 899999999976 46678999999986 799
Q ss_pred EEECCCC
Q 000808 910 IYVGPLG 916 (1275)
Q Consensus 910 ~~~g~~~ 916 (1275)
++.|+.+
T Consensus 221 ~~~g~~~ 227 (283)
T PRK13636 221 ILQGNPK 227 (283)
T ss_pred EEeCCHH
Confidence 9999874
No 143
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-36 Score=342.06 Aligned_cols=219 Identities=21% Similarity=0.329 Sum_probs=180.3
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 756 (1275)
.++++|+++.++... ...+.+|+|||++|++||+++|+||||||||||+++|+|..+ +..|+|.++|.++
T Consensus 2 ~l~~~~l~~~y~~~~--------~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~--p~~G~i~~~g~~i 71 (286)
T PRK13646 2 TIRFDNVSYTYQKGT--------PYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLK--PTTGTVTVDDITI 71 (286)
T ss_pred EEEEEEEEEEECCCC--------ccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEEC
Confidence 378899998884110 012469999999999999999999999999999999999876 3479999999876
Q ss_pred Cc-------ccccceEEEeccCC--CCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCC-ccccccccCCC
Q 000808 757 KQ-------ETFTRISGYCEQND--IHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELN-PLRQSLVGLPG 826 (1275)
Q Consensus 757 ~~-------~~~~~~~~~v~q~~--~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~ 826 (1275)
.. ...++.+||++|++ .+++ .||.||+.|..... ..+.++.+++++++++.+||. +..++.+
T Consensus 72 ~~~~~~~~~~~~~~~ig~v~q~~~~~l~~-~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~---- 143 (286)
T PRK13646 72 THKTKDKYIRPVRKRIGMVFQFPESQLFE-DTVEREIIFGPKNF---KMNLDEVKNYAHRLLMDLGFSRDVMSQSP---- 143 (286)
T ss_pred ccccccchHHHHHhheEEEecChHhccch-hhHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHcCCChhhhhCCc----
Confidence 32 13456799999986 3554 59999998864322 234445566788999999996 5666554
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhh-CCCEEEEEecCCCHHHHHhhhhhheeec
Q 000808 827 ESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFESFDELFLMKR 905 (1275)
Q Consensus 827 ~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~~~~l~~ 905 (1275)
..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ +|+|||++||+++ ++.+.+|++++|++
T Consensus 144 -~~LSgGq~qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~-~~~~~~dri~~l~~ 221 (286)
T PRK13646 144 -FQMSGGQMRKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMN-EVARYADEVIVMKE 221 (286)
T ss_pred -ccCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC
Confidence 57999999999999999999999999999999999999999999999875 4899999999975 46788999999986
Q ss_pred CcEEEEECCCC
Q 000808 906 GGQEIYVGPLG 916 (1275)
Q Consensus 906 gg~~~~~g~~~ 916 (1275)
|++++.|++.
T Consensus 222 -G~i~~~g~~~ 231 (286)
T PRK13646 222 -GSIVSQTSPK 231 (286)
T ss_pred -CEEEEECCHH
Confidence 7999999863
No 144
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=8.4e-37 Score=344.36 Aligned_cols=195 Identities=32% Similarity=0.448 Sum_probs=168.9
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCC--ccccceEEEeccccccCCCCCHHHHHHHHHhccCCC
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDE--FVPQRTAAYISQHDVHIGEMTVRETLAFSARCQGVG 78 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~--~~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~ 78 (1275)
+++++||||||||||+++|+|.+.|+ +|+|.++|.+... ...++.+||++|++.+++.+||+||+.|.+.+++..
T Consensus 33 i~gllG~NGAGKTTllk~l~gl~~p~---~G~i~i~G~~~~~~~~~~~~~igy~~~~~~~~~~lT~~e~l~~~~~l~~~~ 109 (293)
T COG1131 33 IFGLLGPNGAGKTTLLKILAGLLKPT---SGEILVLGYDVVKEPAKVRRRIGYVPQEPSLYPELTVRENLEFFARLYGLS 109 (293)
T ss_pred EEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEEcCEeCccCHHHHHhheEEEccCCCCCccccHHHHHHHHHHHhCCC
Confidence 57999999999999999999999997 9999999988754 344678999999999999999999999999876532
Q ss_pred CcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhhHHHH
Q 000808 79 SRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEM 158 (1275)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~a 158 (1275)
. ...+..++++++.+||++.. ++.+++||+||||||+||+|
T Consensus 110 ~----------------------------------~~~~~~~~~~l~~~~L~~~~-----~~~~~~lS~G~kqrl~ia~a 150 (293)
T COG1131 110 K----------------------------------EEAEERIEELLELFGLEDKA-----NKKVRTLSGGMKQRLSIALA 150 (293)
T ss_pred h----------------------------------hHHHHHHHHHHHHcCCchhh-----CcchhhcCHHHHHHHHHHHH
Confidence 1 01123467899999998743 34566899999999999999
Q ss_pred HhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhhHHHHHH
Q 000808 159 MVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVLDFFE 238 (1275)
Q Consensus 159 l~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~~~~~f~ 238 (1275)
|+++|+++||||||+|||+.++.++++.|+++++. ++++|++++|..+++..+||+|++|++|++++.|+.+++...+.
T Consensus 151 L~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~-g~~tvlissH~l~e~~~~~d~v~il~~G~~~~~g~~~~l~~~~~ 229 (293)
T COG1131 151 LLHDPELLILDEPTSGLDPESRREIWELLRELAKE-GGVTILLSTHILEEAEELCDRVIILNDGKIIAEGTPEELKEKFG 229 (293)
T ss_pred HhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhC-CCcEEEEeCCcHHHHHHhCCEEEEEeCCEEEEeCCHHHHHHhhc
Confidence 99999999999999999999999999999998764 34677778999999999999999999999999999998876543
No 145
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=4.7e-36 Score=335.95 Aligned_cols=214 Identities=20% Similarity=0.266 Sum_probs=180.4
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 756 (1275)
.++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~ 69 (257)
T PRK10619 5 KLNVIDLHKRYG-------------EHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEK--PSEGSIVVNGQTI 69 (257)
T ss_pred cEEEeeeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEc
Confidence 488999998873 2469999999999999999999999999999999999865 3479999999865
Q ss_pred Cc----------------ccccceEEEeccCCCCCCCCCHHHHHHHHHh-ccCCCCCCHHHHHHHHHHHHHHcCCCccc-
Q 000808 757 KQ----------------ETFTRISGYCEQNDIHSPFVTVYESLLYSAW-LRLPPEVDSETQKMFIEEIMELVELNPLR- 818 (1275)
Q Consensus 757 ~~----------------~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~-l~~~~~~~~~~~~~~~~~~l~~l~l~~~~- 818 (1275)
.. ..+++.++|++|++.+++.+|++||+.+... .. .....+.++++.++++.+|+.+..
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~ 146 (257)
T PRK10619 70 NLVRDKDGQLKVADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVL---GLSKQEARERAVKYLAKVGIDERAQ 146 (257)
T ss_pred ccccccccccccccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhC---CCCHHHHHHHHHHHHHHcCCChhhh
Confidence 31 1235678999999999999999999987542 21 123344556788999999997653
Q ss_pred cccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhh
Q 000808 819 QSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFD 898 (1275)
Q Consensus 819 ~~~~~~~~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d 898 (1275)
+..+ ..||||||||++|||||+.+|++++|||||+|||+.++..+.+.|++++++|+|||+++|+++ ++...+|
T Consensus 147 ~~~~-----~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~-~~~~~~d 220 (257)
T PRK10619 147 GKYP-----VHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMG-FARHVSS 220 (257)
T ss_pred hCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcC
Confidence 4443 579999999999999999999999999999999999999999999998777999999999985 4667899
Q ss_pred hhheeecCcEEEEECCC
Q 000808 899 ELFLMKRGGQEIYVGPL 915 (1275)
Q Consensus 899 ~~~~l~~gg~~~~~g~~ 915 (1275)
++++|++ |++++.|+.
T Consensus 221 ~i~~l~~-G~i~~~~~~ 236 (257)
T PRK10619 221 HVIFLHQ-GKIEEEGAP 236 (257)
T ss_pred EEEEEEC-CEEEEeCCH
Confidence 9999986 789998876
No 146
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=3.1e-36 Score=332.07 Aligned_cols=217 Identities=24% Similarity=0.281 Sum_probs=172.2
Q ss_pred EEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCC
Q 000808 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1275)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 757 (1275)
++++|+++++... ....++|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++.
T Consensus 2 l~~~~v~~~~~~~---------~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 70 (228)
T cd03257 2 LEVKNLSVSFPTG---------GGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLK--PTSGSIIFDGKDLL 70 (228)
T ss_pred eEEEeeeEeccCC---------CcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcc
Confidence 5678888876310 001259999999999999999999999999999999999865 34799999998764
Q ss_pred c------ccccceEEEeccCC--CCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCC-ccccccccCCCCC
Q 000808 758 Q------ETFTRISGYCEQND--IHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELN-PLRQSLVGLPGES 828 (1275)
Q Consensus 758 ~------~~~~~~~~~v~q~~--~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~~~ 828 (1275)
. ..+++.++|++|++ .+++.+|++||+.+......+ ....+..+..++++++.+++. +..+..+ .
T Consensus 71 ~~~~~~~~~~~~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~ 144 (228)
T cd03257 71 KLSRRLRKIRRKEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGK-LSKKEARKEAVLLLLVGVGLPEEVLNRYP-----H 144 (228)
T ss_pred ccchhhHHHhhccEEEEecCchhhcCCcCCHHHHHHHHHHhccC-CcHHHHHHHHHHHHHHHCCCChhHhhCCc-----h
Confidence 3 13456799999998 466789999999876543321 111111122235788999985 4555554 4
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhhhhheeecCc
Q 000808 829 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDELFLMKRGG 907 (1275)
Q Consensus 829 ~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg 907 (1275)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ .+...+|++++|++ |
T Consensus 145 ~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G 222 (228)
T cd03257 145 ELSGGQRQRVAIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLG-VVAKIADRVAVMYA-G 222 (228)
T ss_pred hcCHHHHHHHHHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEEEEeC-C
Confidence 69999999999999999999999999999999999999999999998765 899999999985 46668999999986 7
Q ss_pred EEEEEC
Q 000808 908 QEIYVG 913 (1275)
Q Consensus 908 ~~~~~g 913 (1275)
+++..|
T Consensus 223 ~i~~~g 228 (228)
T cd03257 223 KIVEEG 228 (228)
T ss_pred EEEecC
Confidence 877654
No 147
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=4.5e-36 Score=344.44 Aligned_cols=230 Identities=20% Similarity=0.240 Sum_probs=184.9
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 756 (1275)
-++++|++++++............+...+++|||++|++||++||+|+||||||||+++|+|..++ .+|+|.++|.++
T Consensus 8 ~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p--~~G~I~~~G~~i 85 (331)
T PRK15079 8 LLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKA--TDGEVAWLGKDL 85 (331)
T ss_pred eEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCC--CCcEEEECCEEC
Confidence 588999998875311000000001235699999999999999999999999999999999998763 489999999876
Q ss_pred Ccc------cccceEEEeccCC--CCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCC-ccccccccCCCC
Q 000808 757 KQE------TFTRISGYCEQND--IHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELN-PLRQSLVGLPGE 827 (1275)
Q Consensus 757 ~~~------~~~~~~~~v~q~~--~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~~ 827 (1275)
... .+++.++||+|++ .++|.+|+.|++.+......+ ..++++.++++.++++.++|. +..++..
T Consensus 86 ~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~~-~~~~~~~~~~~~~~l~~vgl~~~~~~~~p----- 159 (331)
T PRK15079 86 LGMKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHP-KLSRQEVKDRVKAMMLKVGLLPNLINRYP----- 159 (331)
T ss_pred CcCCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhcc-CCCHHHHHHHHHHHHHHcCCChHHhcCCc-----
Confidence 431 2356799999997 578899999999876543211 234555667788999999994 3445544
Q ss_pred CCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhhhhheeecC
Q 000808 828 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDELFLMKRG 906 (1275)
Q Consensus 828 ~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~g 906 (1275)
.+|||||||||+|||||+.+|++|++||||+|||..++..+++.|+++.++ |.|+|++|||++ .+.+.+|++++|.+
T Consensus 160 ~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~-~~~~~~dri~vl~~- 237 (331)
T PRK15079 160 HEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLA-VVKHISDRVLVMYL- 237 (331)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-
Confidence 579999999999999999999999999999999999999999999998764 899999999985 46678999999985
Q ss_pred cEEEEECCCC
Q 000808 907 GQEIYVGPLG 916 (1275)
Q Consensus 907 g~~~~~g~~~ 916 (1275)
|+++..|+.+
T Consensus 238 G~ive~g~~~ 247 (331)
T PRK15079 238 GHAVELGTYD 247 (331)
T ss_pred CEEEEEcCHH
Confidence 7999999864
No 148
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-36 Score=340.91 Aligned_cols=217 Identities=24% Similarity=0.309 Sum_probs=182.3
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 756 (1275)
-++++|+++.++.. +.+.+|+|+|++|++||++||+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~~~----------~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i 71 (279)
T PRK13650 4 IIEVKNLTFKYKED----------QEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLE--AESGQIIIDGDLL 71 (279)
T ss_pred eEEEEeEEEEcCCC----------CcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEEC
Confidence 47899999887411 12359999999999999999999999999999999999866 3489999999886
Q ss_pred Cc---ccccceEEEeccCCC-CCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCH
Q 000808 757 KQ---ETFTRISGYCEQNDI-HSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLST 832 (1275)
Q Consensus 757 ~~---~~~~~~~~~v~q~~~-~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSg 832 (1275)
.. ...++.++|++|++. .++..||+||+.|..... ..+.++.+++++++++.+||.+..+..+ ..|||
T Consensus 72 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LSg 143 (279)
T PRK13650 72 TEENVWDIRHKIGMVFQNPDNQFVGATVEDDVAFGLENK---GIPHEEMKERVNEALELVGMQDFKEREP-----ARLSG 143 (279)
T ss_pred CcCcHHHHHhhceEEEcChHHhcccccHHHHHHhhHHhC---CCCHHHHHHHHHHHHHHCCCHhHhhCCc-----ccCCH
Confidence 43 234567899999973 667789999998865322 2344555667899999999988777765 47999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhhhhheeecCcEEEE
Q 000808 833 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDELFLMKRGGQEIY 911 (1275)
Q Consensus 833 Gerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~ 911 (1275)
|||||++|||||+.+|++|+|||||+|||+.++..+++.|++++++ |+|||++||+++ ++ ..+|++++|.+ |+++.
T Consensus 144 Gq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~-~~-~~~dri~~l~~-G~i~~ 220 (279)
T PRK13650 144 GQKQRVAIAGAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLD-EV-ALSDRVLVMKN-GQVES 220 (279)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HH-HhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999865 899999999976 34 57999999985 79999
Q ss_pred ECCCC
Q 000808 912 VGPLG 916 (1275)
Q Consensus 912 ~g~~~ 916 (1275)
.|+++
T Consensus 221 ~g~~~ 225 (279)
T PRK13650 221 TSTPR 225 (279)
T ss_pred ECCHH
Confidence 99863
No 149
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.5e-36 Score=350.55 Aligned_cols=203 Identities=23% Similarity=0.293 Sum_probs=175.0
Q ss_pred ccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCCcc---c----ccceEEEeccCCCC
Q 000808 702 KLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQE---T----FTRISGYCEQNDIH 774 (1275)
Q Consensus 702 ~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~~---~----~~~~~~~v~q~~~~ 774 (1275)
...+|+|+||+|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++... . .++.++|++|++.+
T Consensus 40 ~~~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~--p~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l 117 (400)
T PRK10070 40 LSLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIE--PTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFAL 117 (400)
T ss_pred CeEEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCC--CCCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcC
Confidence 3468999999999999999999999999999999999876 3479999999876431 1 23568999999999
Q ss_pred CCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEe
Q 000808 775 SPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMD 854 (1275)
Q Consensus 775 ~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~~l~~~p~illlD 854 (1275)
++.+||+||+.+....+ ....++.+++++++++.+||.+..++.+ +.||||||||++|||||+.+|++||||
T Consensus 118 ~~~~Tv~enl~~~~~~~---~~~~~~~~~~~~e~L~~~gL~~~~~~~~-----~~LSgGq~QRv~LArAL~~~P~iLLLD 189 (400)
T PRK10070 118 MPHMTVLDNTAFGMELA---GINAEERREKALDALRQVGLENYAHSYP-----DELSGGMRQRVGLARALAINPDILLMD 189 (400)
T ss_pred CCCCCHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCChhhhcCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEE
Confidence 99999999999876543 2233445567889999999988777765 479999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHhh-CCCEEEEEecCCCHHHHHhhhhhheeecCcEEEEECCCC
Q 000808 855 EPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVGPLG 916 (1275)
Q Consensus 855 EPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~~ 916 (1275)
|||+|||+.++..+++.|+++.+ .|+|||++||+++ ++...+|++++|++ |+++..|+++
T Consensus 190 EPts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~-~~~~~~Dri~vL~~-G~i~~~g~~~ 250 (400)
T PRK10070 190 EAFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLD-EAMRIGDRIAIMQN-GEVVQVGTPD 250 (400)
T ss_pred CCCccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHH-HHHHhCCEEEEEEC-CEEEecCCHH
Confidence 99999999999999999999875 4899999999986 57788999999986 7999998763
No 150
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=5.1e-36 Score=328.47 Aligned_cols=211 Identities=25% Similarity=0.329 Sum_probs=172.5
Q ss_pred EEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCC
Q 000808 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1275)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 757 (1275)
++++|+++++... .+.+++|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~v~~~~~~~---------~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~ 70 (221)
T TIGR02211 2 LKCENLGKRYQEG---------KLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDN--PTSGEVLFNGQSLS 70 (221)
T ss_pred EEEEeeeEEccCC---------CcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEhh
Confidence 5678888876311 012469999999999999999999999999999999999865 34899999998754
Q ss_pred cc---c---cc-ceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCC
Q 000808 758 QE---T---FT-RISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGL 830 (1275)
Q Consensus 758 ~~---~---~~-~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~l 830 (1275)
.. . ++ +.++|++|++.+++.+|++||+.+....+. ....+..+++.++++.+|+.+..+..+ ..|
T Consensus 71 ~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~L 142 (221)
T TIGR02211 71 KLSSNERAKLRNKKLGFIYQFHHLLPDFTALENVAMPLLIGK---KSVKEAKERAYEMLEKVGLEHRINHRP-----SEL 142 (221)
T ss_pred hcCHhHHHHHHHhcEEEEecccccCCCCcHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhC
Confidence 21 1 12 568999999988889999999988654321 222333456788999999987776665 469
Q ss_pred CHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhhhhheeecCcEE
Q 000808 831 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDELFLMKRGGQE 909 (1275)
Q Consensus 831 SgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~ 909 (1275)
|||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||++||+++ .+ ..+|++++|++ |++
T Consensus 143 S~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~-~~-~~~d~v~~l~~-G~i 219 (221)
T TIGR02211 143 SGGERQRVAIARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLE-LA-KKLDRVLEMKD-GQL 219 (221)
T ss_pred CHHHHHHHHHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HH-hhcCEEEEEeC-CEe
Confidence 999999999999999999999999999999999999999999998764 899999999986 34 55799999986 665
Q ss_pred E
Q 000808 910 I 910 (1275)
Q Consensus 910 ~ 910 (1275)
+
T Consensus 220 ~ 220 (221)
T TIGR02211 220 F 220 (221)
T ss_pred c
Confidence 4
No 151
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=1.5e-36 Score=330.46 Aligned_cols=199 Identities=27% Similarity=0.413 Sum_probs=163.8
Q ss_pred cceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCCcccccceEEEeccCCCCC--CCCCH
Q 000808 703 LMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQETFTRISGYCEQNDIHS--PFVTV 780 (1275)
Q Consensus 703 ~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~~~~~~~~~~v~q~~~~~--~~ltv 780 (1275)
+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.. ..++.++|++|++.+. ..+|+
T Consensus 12 ~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~--~~~~~i~~v~q~~~~~~~~~~tv 87 (213)
T cd03235 12 HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLK--PTSGSIRVFGKPLE--KERKRIGYVPQRRSIDRDFPISV 87 (213)
T ss_pred EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCCEEEECCccHH--HHHhheEEeccccccccCCCCcH
Confidence 459999999999999999999999999999999999865 34799999997653 2456789999998764 33799
Q ss_pred HHHHHHHHhccCC-CCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCC
Q 000808 781 YESLLYSAWLRLP-PEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 859 (1275)
Q Consensus 781 ~e~l~~~~~l~~~-~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsg 859 (1275)
+||+.+....... .....+..+++++++++.+++.+..++.+ ..||||||||++|||||+.+|++|+|||||+|
T Consensus 88 ~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~llllDEPt~~ 162 (213)
T cd03235 88 RDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLSELADRQI-----GELSGGQQQRVLLARALVQDPDLLLLDEPFAG 162 (213)
T ss_pred HHHHHhccccccccccCCCHHHHHHHHHHHHHcCCHHHHhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCccc
Confidence 9999875432110 00112234456889999999987766665 46999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcEEEEEC
Q 000808 860 LDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVG 913 (1275)
Q Consensus 860 LD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g 913 (1275)
||+.++..+.+.|++++++|+|||++||+++ ++.+.+|++++|++ | +++.|
T Consensus 163 LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~-~-~~~~g 213 (213)
T cd03235 163 VDPKTQEDIYELLRELRREGMTILVVTHDLG-LVLEYFDRVLLLNR-T-VVASG 213 (213)
T ss_pred CCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEcC-c-EeecC
Confidence 9999999999999998777899999999986 56678999999975 4 56654
No 152
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=2e-36 Score=329.11 Aligned_cols=193 Identities=26% Similarity=0.376 Sum_probs=162.5
Q ss_pred cceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCCc---ccccceEEEeccCCC-CCCCC
Q 000808 703 LMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ---ETFTRISGYCEQNDI-HSPFV 778 (1275)
Q Consensus 703 ~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~---~~~~~~~~~v~q~~~-~~~~l 778 (1275)
+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ..+++.++|++|++. .++.+
T Consensus 14 ~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~~ 91 (211)
T cd03225 14 RPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLG--PTSGEVLVDGKDLTKLSLKELRRKVGLVFQNPDDQFFGP 91 (211)
T ss_pred eeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEEcccCCHHHHHhhceEEecChhhhcCCC
Confidence 469999999999999999999999999999999999865 347999999987542 234567899999975 35678
Q ss_pred CHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCC
Q 000808 779 TVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTS 858 (1275)
Q Consensus 779 tv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~~l~~~p~illlDEPts 858 (1275)
|++||+.+..... .......++.++++++.+++.+..++.+ ..||||||||++|||||+.+|++++|||||+
T Consensus 92 t~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~laral~~~p~llllDEPt~ 163 (211)
T cd03225 92 TVEEEVAFGLENL---GLPEEEIEERVEEALELVGLEGLRDRSP-----FTLSGGQKQRVAIAGVLAMDPDILLLDEPTA 163 (211)
T ss_pred cHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCcHhhhcCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcc
Confidence 9999998765332 1223334456788999999987766665 4699999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecC
Q 000808 859 GLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRG 906 (1275)
Q Consensus 859 gLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~g 906 (1275)
|||+.++..+.+.|++++++|+|||++||+++ ++...+|++++|.+|
T Consensus 164 ~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~G 210 (211)
T cd03225 164 GLDPAGRRELLELLKKLKAEGKTIIIVTHDLD-LLLELADRVIVLEDG 210 (211)
T ss_pred cCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEeCC
Confidence 99999999999999998877899999999975 566779999999863
No 153
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.2e-36 Score=339.89 Aligned_cols=220 Identities=24% Similarity=0.302 Sum_probs=180.3
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 756 (1275)
.++++|+++.+.... ...+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 2 ~i~~~~l~~~~~~~~--------~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~--p~~G~i~~~g~~~ 71 (287)
T PRK13641 2 SIKFENVDYIYSPGT--------PMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLK--PSSGTITIAGYHI 71 (287)
T ss_pred EEEEEEEEEEcCCCC--------CccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEEC
Confidence 367889988774110 012469999999999999999999999999999999999876 3589999999875
Q ss_pred Cc-------ccccceEEEeccCCC-CCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCC-ccccccccCCCC
Q 000808 757 KQ-------ETFTRISGYCEQNDI-HSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELN-PLRQSLVGLPGE 827 (1275)
Q Consensus 757 ~~-------~~~~~~~~~v~q~~~-~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~~ 827 (1275)
.. ...++.++|++|++. .+..+||.||+.+..... ....++.+++++++++.+||. +..++.+
T Consensus 72 ~~~~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~----- 143 (287)
T PRK13641 72 TPETGNKNLKKLRKKVSLVFQFPEAQLFENTVLKDVEFGPKNF---GFSEDEAKEKALKWLKKVGLSEDLISKSP----- 143 (287)
T ss_pred ccccccchHHHHHhceEEEEeChhhhhccchHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCChhHhhCCc-----
Confidence 32 123457899999963 233579999998765332 223445556789999999997 5666665
Q ss_pred CCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCc
Q 000808 828 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGG 907 (1275)
Q Consensus 828 ~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg 907 (1275)
+.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.++|.|||++||+++ ++.+.+|++++|++ |
T Consensus 144 ~~LSgGq~qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~-~~~~~~d~v~~l~~-G 221 (287)
T PRK13641 144 FELSGGQMRRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMD-DVAEYADDVLVLEH-G 221 (287)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-C
Confidence 479999999999999999999999999999999999999999999998777999999999975 56788999999986 7
Q ss_pred EEEEECCCC
Q 000808 908 QEIYVGPLG 916 (1275)
Q Consensus 908 ~~~~~g~~~ 916 (1275)
+++..|++.
T Consensus 222 ~i~~~g~~~ 230 (287)
T PRK13641 222 KLIKHASPK 230 (287)
T ss_pred EEEEeCCHH
Confidence 999999863
No 154
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.6e-35 Score=365.48 Aligned_cols=218 Identities=30% Similarity=0.438 Sum_probs=180.5
Q ss_pred CCcEEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcC
Q 000808 674 EPHSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISG 753 (1275)
Q Consensus 674 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g 753 (1275)
....++|+||+|+|+.++ +.+||+|+|+.|++|+.+||+|||||||||++++|.+..+ +.+|+|.+||
T Consensus 347 ~~g~ief~nV~FsYPsRp----------dv~Il~g~sl~i~~G~~valVG~SGsGKST~i~LL~Rfyd--P~~G~V~idG 414 (1228)
T KOG0055|consen 347 IKGEIEFRNVCFSYPSRP----------DVKILKGVSLKIPSGQTVALVGPSGSGKSTLIQLLARFYD--PTSGEVLIDG 414 (1228)
T ss_pred cccceEEEEEEecCCCCC----------cchhhCCeEEEeCCCCEEEEECCCCCCHHHHHHHHHHhcC--CCCceEEEcC
Confidence 356899999999997543 3469999999999999999999999999999999999776 4589999999
Q ss_pred ccCCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHH-------cCCCcccccccc
Q 000808 754 YPKKQ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMEL-------VELNPLRQSLVG 823 (1275)
Q Consensus 754 ~~~~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~-------l~l~~~~~~~~~ 823 (1275)
.+++. +.++.++|.|.|+|.+|. .|++||+.|+- ++.+.++ ++++.+. ..|.+-.|+.+|
T Consensus 415 ~di~~~~~~~lr~~iglV~QePvlF~-~tI~eNI~~G~-----~dat~~~----i~~a~k~ana~~fi~~lp~g~~T~vg 484 (1228)
T KOG0055|consen 415 EDIRNLNLKWLRSQIGLVSQEPVLFA-TTIRENIRYGK-----PDATREE----IEEAAKAANAHDFILKLPDGYDTLVG 484 (1228)
T ss_pred ccchhcchHHHHhhcCeeeechhhhc-ccHHHHHhcCC-----CcccHHH----HHHHHHHccHHHHHHhhHHhhccccc
Confidence 98754 346778999999997765 79999998752 2222222 3333333 234455678888
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhhee
Q 000808 824 LPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLM 903 (1275)
Q Consensus 824 ~~~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l 903 (1275)
..+. +||||||||++|||||++||+||+||||||+||+++.+.+++.|.+.. .|+|.|+++|+++ ..+.+|++++|
T Consensus 485 e~g~-qLSGGQKQRIAIARalv~~P~ILLLDEaTSaLD~~se~~Vq~ALd~~~-~grTTivVaHRLS--tIrnaD~I~v~ 560 (1228)
T KOG0055|consen 485 ERGV-QLSGGQKQRIAIARALVRNPKILLLDEATSALDAESERVVQEALDKAS-KGRTTIVVAHRLS--TIRNADKIAVM 560 (1228)
T ss_pred CCCC-CCChHHHHHHHHHHHHHhCCCEEEecCcccccCHHHHHHHHHHHHHhh-cCCeEEEEeeehh--hhhccCEEEEE
Confidence 6554 599999999999999999999999999999999999999999998865 5899999999986 45669999999
Q ss_pred ecCcEEEEECCCCcc
Q 000808 904 KRGGQEIYVGPLGRH 918 (1275)
Q Consensus 904 ~~gg~~~~~g~~~~~ 918 (1275)
++ |+++..|..++.
T Consensus 561 ~~-G~IvE~G~h~EL 574 (1228)
T KOG0055|consen 561 EE-GKIVEQGTHDEL 574 (1228)
T ss_pred EC-CEEEEecCHHHH
Confidence 96 799999998543
No 155
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.3e-36 Score=338.20 Aligned_cols=214 Identities=22% Similarity=0.316 Sum_probs=179.6
Q ss_pred EEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCC
Q 000808 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1275)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 757 (1275)
++++|+++.++ +++.+|+|+||+|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~ 67 (274)
T PRK13644 2 IRLENVSYSYP------------DGTPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLR--PQKGKVLVSGIDTG 67 (274)
T ss_pred EEEEEEEEEcC------------CCCceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEECC
Confidence 56788888763 12359999999999999999999999999999999999865 35899999998764
Q ss_pred c----ccccceEEEeccCCC-CCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCH
Q 000808 758 Q----ETFTRISGYCEQNDI-HSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLST 832 (1275)
Q Consensus 758 ~----~~~~~~~~~v~q~~~-~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSg 832 (1275)
. ...++.++|++|++. .+...|+.||+.+..... ..+..+.+++++++++.+|+.+..++.+ ..|||
T Consensus 68 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~ 139 (274)
T PRK13644 68 DFSKLQGIRKLVGIVFQNPETQFVGRTVEEDLAFGPENL---CLPPIEIRKRVDRALAEIGLEKYRHRSP-----KTLSG 139 (274)
T ss_pred ccccHHHHHhheEEEEEChhhhcccchHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHHHhcCCc-----ccCCH
Confidence 2 223567999999975 356689999998765322 2334455567889999999988777765 46999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcEEEEE
Q 000808 833 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYV 912 (1275)
Q Consensus 833 Gerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~ 912 (1275)
|||||++||+||+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|+++ ++ ..+|++++|++ |++++.
T Consensus 140 G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~-~~-~~~d~v~~l~~-G~i~~~ 216 (274)
T PRK13644 140 GQGQCVALAGILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLE-EL-HDADRIIVMDR-GKIVLE 216 (274)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HH-hhCCEEEEEEC-CEEEEE
Confidence 9999999999999999999999999999999999999999998777999999999986 34 67999999986 789999
Q ss_pred CCCC
Q 000808 913 GPLG 916 (1275)
Q Consensus 913 g~~~ 916 (1275)
|+.+
T Consensus 217 g~~~ 220 (274)
T PRK13644 217 GEPE 220 (274)
T ss_pred CCHH
Confidence 9863
No 156
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.6e-36 Score=332.61 Aligned_cols=213 Identities=23% Similarity=0.328 Sum_probs=179.0
Q ss_pred EEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCC
Q 000808 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1275)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 757 (1275)
++++|+++.+. ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 67 (242)
T PRK11124 3 IQLNGINCFYG-------------AHQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEM--PRSGTLNIAGNHFD 67 (242)
T ss_pred EEEEeeEEEEC-------------CeeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEecc
Confidence 67889988773 2359999999999999999999999999999999999865 35899999998652
Q ss_pred c---------ccccceEEEeccCCCCCCCCCHHHHHHHH-HhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCC
Q 000808 758 Q---------ETFTRISGYCEQNDIHSPFVTVYESLLYS-AWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGE 827 (1275)
Q Consensus 758 ~---------~~~~~~~~~v~q~~~~~~~ltv~e~l~~~-~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~ 827 (1275)
. ...++.++|++|++.+++.+|+.||+.+. .... .....+..+++.++++.+|+.+..+..+
T Consensus 68 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~----- 139 (242)
T PRK11124 68 FSKTPSDKAIRELRRNVGMVFQQYNLWPHLTVQQNLIEAPCRVL---GLSKDQALARAEKLLERLRLKPYADRFP----- 139 (242)
T ss_pred cccccchhhHHHHHhheEEEecCccccCCCcHHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCChhhhhCCh-----
Confidence 0 12345789999999999999999999643 2221 1223334556889999999987777665
Q ss_pred CCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCc
Q 000808 828 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGG 907 (1275)
Q Consensus 828 ~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg 907 (1275)
+.||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++.++|+|+|+++|+++ ++.+.+|++++|.+ |
T Consensus 140 ~~LS~G~~qrv~laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~-~~~~~~d~i~~l~~-g 217 (242)
T PRK11124 140 LHLSGGQQQRVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVE-VARKTASRVVYMEN-G 217 (242)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEEEEEEC-C
Confidence 479999999999999999999999999999999999999999999998777999999999986 56678999999986 7
Q ss_pred EEEEECCC
Q 000808 908 QEIYVGPL 915 (1275)
Q Consensus 908 ~~~~~g~~ 915 (1275)
++++.|+.
T Consensus 218 ~i~~~~~~ 225 (242)
T PRK11124 218 HIVEQGDA 225 (242)
T ss_pred EEEEeCCH
Confidence 99999876
No 157
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.2e-36 Score=338.40 Aligned_cols=215 Identities=25% Similarity=0.364 Sum_probs=180.7
Q ss_pred EEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCC
Q 000808 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1275)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 757 (1275)
++++|++++++ +++.+|+|+||++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 4 l~~~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~ 69 (277)
T PRK13652 4 IETRDLCYSYS------------GSKEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILK--PTSGSVLIRGEPIT 69 (277)
T ss_pred EEEEEEEEEeC------------CCCceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEECC
Confidence 67889988773 12359999999999999999999999999999999999866 35899999998764
Q ss_pred c---ccccceEEEeccCCC-CCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHH
Q 000808 758 Q---ETFTRISGYCEQNDI-HSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTE 833 (1275)
Q Consensus 758 ~---~~~~~~~~~v~q~~~-~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgG 833 (1275)
. ...++.++|++|++. .+...||.||+.+..... ..+.+..+++++++++.+||.+..++.+ +.||||
T Consensus 70 ~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G 141 (277)
T PRK13652 70 KENIREVRKFVGLVFQNPDDQIFSPTVEQDIAFGPINL---GLDEETVAHRVSSALHMLGLEELRDRVP-----HHLSGG 141 (277)
T ss_pred cCCHHHHHhheEEEecCcccccccccHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHCCChhHhcCCc-----ccCCHH
Confidence 3 234567899999974 334579999998765322 2344445567889999999988777765 479999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhhhhheeecCcEEEEE
Q 000808 834 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYV 912 (1275)
Q Consensus 834 erqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~ 912 (1275)
||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|+++ ++.+.+|++++|++ |++++.
T Consensus 142 q~qrl~laraL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~-~~~~~~drv~~l~~-G~i~~~ 219 (277)
T PRK13652 142 EKKRVAIAGVIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLD-LVPEMADYIYVMDK-GRIVAY 219 (277)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEEC-CeEEEE
Confidence 999999999999999999999999999999999999999998765 899999999986 56789999999986 789999
Q ss_pred CCCC
Q 000808 913 GPLG 916 (1275)
Q Consensus 913 g~~~ 916 (1275)
|+++
T Consensus 220 g~~~ 223 (277)
T PRK13652 220 GTVE 223 (277)
T ss_pred CCHH
Confidence 9864
No 158
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=1e-36 Score=297.42 Aligned_cols=191 Identities=22% Similarity=0.339 Sum_probs=161.6
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCccc-cceEEEeccccccCCCCCHHHHHHHHHhccCCCC
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFVP-QRTAAYISQHDVHIGEMTVRETLAFSARCQGVGS 79 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~~~-~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~ 79 (1275)
++||+||||||||||||+|+|...|. +|+|++||.+.+...+ +|-+++++|+..+|..+||.+|+.++.. ++-
T Consensus 27 ~vAi~GpSGaGKSTLLnLIAGF~~P~---~G~i~i~g~d~t~~~P~~RPVSmlFQEnNLFaHLtV~qNigLGl~---P~L 100 (231)
T COG3840 27 IVAILGPSGAGKSTLLNLIAGFETPA---SGEILINGVDHTASPPAERPVSMLFQENNLFAHLTVAQNIGLGLS---PGL 100 (231)
T ss_pred EEEEECCCCccHHHHHHHHHhccCCC---CceEEEcCeecCcCCcccCChhhhhhccccchhhhhhhhhcccCC---ccc
Confidence 48999999999999999999999997 9999999999865543 5789999999999999999999988542 111
Q ss_pred cchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhhHHHHH
Q 000808 80 RYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEMM 159 (1275)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~al 159 (1275)
+.+ .+.++.++.++..+||..+.+ +.+.+|||||||||+|||+|
T Consensus 101 kL~-------------------------------a~~r~~v~~aa~~vGl~~~~~-----RLP~~LSGGqRQRvALARcl 144 (231)
T COG3840 101 KLN-------------------------------AEQREKVEAAAAQVGLAGFLK-----RLPGELSGGQRQRVALARCL 144 (231)
T ss_pred ccC-------------------------------HHHHHHHHHHHHHhChhhHhh-----hCccccCchHHHHHHHHHHH
Confidence 100 112234677889999987765 45668999999999999999
Q ss_pred hcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhhHH
Q 000808 160 VGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVL 234 (1275)
Q Consensus 160 ~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~~~ 234 (1275)
+.+-+|++||||+|+|||.-+.+....+.+++.+. +.|+++++|+.+++.+++|+++++++|+|.++|+.++..
T Consensus 145 vR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~-~~TllmVTH~~~Da~~ia~~~~fl~~Gri~~~g~~~~~~ 218 (231)
T COG3840 145 VREQPILLLDEPFSALDPALRAEMLALVSQLCDER-KMTLLMVTHHPEDAARIADRVVFLDNGRIAAQGSTQELL 218 (231)
T ss_pred hccCCeEEecCchhhcCHHHHHHHHHHHHHHHHhh-CCEEEEEeCCHHHHHHhhhceEEEeCCEEEeeccHHHHh
Confidence 99999999999999999999999999999988765 455555777788999999999999999999999988764
No 159
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=7.9e-36 Score=327.10 Aligned_cols=208 Identities=24% Similarity=0.338 Sum_probs=176.9
Q ss_pred EEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCCc
Q 000808 679 TFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 758 (1275)
Q Consensus 679 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 758 (1275)
+++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~l~~v~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~~~~~~~ 66 (223)
T TIGR03740 2 ETKNLSKRFG-------------KQTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILR--PTSGEIIFDGHPWTR 66 (223)
T ss_pred EEEeEEEEEC-------------CEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEeccc
Confidence 5677877653 2469999999999999999999999999999999999865 358999999987643
Q ss_pred ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHH
Q 000808 759 ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKRL 838 (1275)
Q Consensus 759 ~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv 838 (1275)
.. .+.++|++|++.+++.+|++||+.+....+. .. ++++.++++.+|+.+..+..+ ..||||||||+
T Consensus 67 ~~-~~~~~~~~q~~~~~~~~t~~~~~~~~~~~~~---~~----~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~~rv 133 (223)
T TIGR03740 67 KD-LHKIGSLIESPPLYENLTARENLKVHTTLLG---LP----DSRIDEVLNIVDLTNTGKKKA-----KQFSLGMKQRL 133 (223)
T ss_pred cc-cccEEEEcCCCCccccCCHHHHHHHHHHHcC---CC----HHHHHHHHHHcCCcHHHhhhH-----hhCCHHHHHHH
Confidence 22 2468999999998888999999987654331 11 234678999999988777665 46999999999
Q ss_pred HHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcEEEEECCCC
Q 000808 839 TIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVGPLG 916 (1275)
Q Consensus 839 ~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~~ 916 (1275)
+|||+|+.+|++++|||||+|||+.++..+.+.|++++++|+|||++||+++ ++.+.+|++++|.+ |++++.|++.
T Consensus 134 ~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-g~i~~~~~~~ 209 (223)
T TIGR03740 134 GIAIALLNHPKLLILDEPTNGLDPIGIQELRELIRSFPEQGITVILSSHILS-EVQQLADHIGIISE-GVLGYQGKIN 209 (223)
T ss_pred HHHHHHhcCCCEEEECCCccCCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHHhcCEEEEEeC-CEEEEecChh
Confidence 9999999999999999999999999999999999998777899999999986 56688999999986 7999999874
No 160
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=4.6e-36 Score=346.95 Aligned_cols=204 Identities=20% Similarity=0.297 Sum_probs=176.1
Q ss_pred cccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCc----cCCc---c---cc-cceEEEec
Q 000808 701 DKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGY----PKKQ---E---TF-TRISGYCE 769 (1275)
Q Consensus 701 ~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~----~~~~---~---~~-~~~~~~v~ 769 (1275)
+...+|+|+||+|++||+++|+||||||||||+++|+|..+ +.+|+|.++|. +... . .. ++.++|++
T Consensus 35 g~~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~--p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vf 112 (382)
T TIGR03415 35 GLVVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNP--VSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVF 112 (382)
T ss_pred CCEEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCCcEEEECCEecccccccCCHHHHHHHhcCCEEEEE
Confidence 45679999999999999999999999999999999999876 34899999996 2211 1 11 25699999
Q ss_pred cCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCc
Q 000808 770 QNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPS 849 (1275)
Q Consensus 770 q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~~l~~~p~ 849 (1275)
|++.+++.+||+||+.++...+ ..+.++.+++++++++.+||.+..+..+ ..||||||||++|||||+.+|+
T Consensus 113 Q~~~l~p~~Tv~eNi~~~~~~~---g~~~~~~~~~a~e~le~vgL~~~~~~~~-----~~LSgGq~QRV~LARALa~~P~ 184 (382)
T TIGR03415 113 QKFALMPWLTVEENVAFGLEMQ---GMPEAERRKRVDEQLELVGLAQWADKKP-----GELSGGMQQRVGLARAFAMDAD 184 (382)
T ss_pred CCCcCCCCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999876443 2344556677899999999998877775 4699999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhhhhheeecCcEEEEECCCC
Q 000808 850 IIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVGPLG 916 (1275)
Q Consensus 850 illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~~ 916 (1275)
||+|||||+|||+.++..+++.|+++.++ |+|||++||+++ ++.+++|++++|++ |+++..|+++
T Consensus 185 ILLlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~-e~~~l~DrI~vl~~-G~iv~~g~~~ 250 (382)
T TIGR03415 185 ILLMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLD-EALKIGNRIAIMEG-GRIIQHGTPE 250 (382)
T ss_pred EEEEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEecCHH
Confidence 99999999999999999999999998765 899999999986 57789999999986 7999999874
No 161
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.9e-36 Score=331.93 Aligned_cols=213 Identities=22% Similarity=0.337 Sum_probs=177.4
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 756 (1275)
-++++|+++.+. ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~ 69 (237)
T PRK11614 5 MLSFDKVSAHYG-------------KIQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPR--ATSGRIVFDGKDI 69 (237)
T ss_pred EEEEEeEEEeeC-------------CceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCC--CCCceEEECCEec
Confidence 478899988763 2469999999999999999999999999999999999865 3479999999876
Q ss_pred Ccc----cccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHc-CCCccccccccCCCCCCCC
Q 000808 757 KQE----TFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELV-ELNPLRQSLVGLPGESGLS 831 (1275)
Q Consensus 757 ~~~----~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l-~l~~~~~~~~~~~~~~~lS 831 (1275)
... ..++.++|++|++.+++.+||.||+.+..... ..++.++.++++++.+ ++.+..+..+ ..||
T Consensus 70 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~-----~~~~~~~~~~~~l~~~~~l~~~~~~~~-----~~LS 139 (237)
T PRK11614 70 TDWQTAKIMREAVAIVPEGRRVFSRMTVEENLAMGGFFA-----ERDQFQERIKWVYELFPRLHERRIQRA-----GTMS 139 (237)
T ss_pred CCCCHHHHHHhCEEEeccCcccCCCCcHHHHHHHhhhcc-----ChhHHHHHHHHHHHHHHHHHHHHhCch-----hhCC
Confidence 431 13456999999999999999999998754221 1122334567777777 4665555543 4699
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcEEEE
Q 000808 832 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQEIY 911 (1275)
Q Consensus 832 gGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~ 911 (1275)
||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++.++|+|||+++|+++ ++.+.+|++++|++ |++++
T Consensus 140 ~G~~qrl~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~ 217 (237)
T PRK11614 140 GGEQQMLAIGRALMSQPRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNAN-QALKLADRGYVLEN-GHVVL 217 (237)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHH-HHHhhCCEEEEEeC-CEEEe
Confidence 99999999999999999999999999999999999999999998777999999999975 57889999999986 79999
Q ss_pred ECCCC
Q 000808 912 VGPLG 916 (1275)
Q Consensus 912 ~g~~~ 916 (1275)
.|+++
T Consensus 218 ~~~~~ 222 (237)
T PRK11614 218 EDTGD 222 (237)
T ss_pred eCCHH
Confidence 99863
No 162
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8e-36 Score=334.06 Aligned_cols=215 Identities=24% Similarity=0.293 Sum_probs=177.3
Q ss_pred cEEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCc---eEEEEEEEc
Q 000808 676 HSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITIS 752 (1275)
Q Consensus 676 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~---~~~G~i~~~ 752 (1275)
..++++|+++.+. ++.+|+|+|++|++||+++|+|+||||||||+++|+|..++. +.+|+|.++
T Consensus 11 ~~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~ 77 (258)
T PRK14268 11 PQIKVENLNLWYG-------------EKQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIE 77 (258)
T ss_pred eeEEEeeeEEEeC-------------CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEEC
Confidence 3588999988763 235999999999999999999999999999999999976421 258999999
Q ss_pred CccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCc----ccccccc
Q 000808 753 GYPKKQ-----ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNP----LRQSLVG 823 (1275)
Q Consensus 753 g~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~----~~~~~~~ 823 (1275)
|.++.. ..+++.++|++|++.+++ +|++||+.+..... ..+.++.+++++++++.+++.+ ..++.+
T Consensus 78 g~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~- 152 (258)
T PRK14268 78 GEDIYEPDVDVVELRKNVGMVFQKPNPFP-MSIYDNVAYGPRIH---GANKKDLDGVVENALRSAALWDETSDRLKSPA- 152 (258)
T ss_pred CEEcccccchHHHHhhhEEEEecCCccCc-ccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCCcchhhhhcCCh-
Confidence 987532 123567999999988887 89999998865432 1233344556788999998842 234333
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhhee
Q 000808 824 LPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLM 903 (1275)
Q Consensus 824 ~~~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l 903 (1275)
..||||||||++|||||+.+|++++|||||+|||+.++..+.+.|+++.+ |+|||+++|+++ ++.+.+|++++|
T Consensus 153 ----~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~-~~tiiivsH~~~-~~~~~~d~i~~l 226 (258)
T PRK14268 153 ----LSLSGGQQQRLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKK-DYTIVIVTHNMQ-QAARISDYTGFF 226 (258)
T ss_pred ----hhCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhh-CCEEEEEECCHH-HHHHhCCEEEEE
Confidence 57999999999999999999999999999999999999999999999864 799999999975 466789999999
Q ss_pred ecCcEEEEECCC
Q 000808 904 KRGGQEIYVGPL 915 (1275)
Q Consensus 904 ~~gg~~~~~g~~ 915 (1275)
++ |++++.|++
T Consensus 227 ~~-G~i~~~~~~ 237 (258)
T PRK14268 227 LM-GELIEFGQT 237 (258)
T ss_pred EC-CEEEEeCCH
Confidence 85 799999876
No 163
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=6.5e-36 Score=332.81 Aligned_cols=219 Identities=22% Similarity=0.261 Sum_probs=175.9
Q ss_pred EEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCC
Q 000808 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1275)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 757 (1275)
++++|++++++ ++.+|+|+|+++++||+++|+||||||||||+++|+|.....+.+|+|.++|.+..
T Consensus 1 l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~ 67 (243)
T TIGR01978 1 LKIKDLHVSVE-------------DKEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLL 67 (243)
T ss_pred CeEeeEEEEEC-------------CEEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecC
Confidence 35788887763 24599999999999999999999999999999999997411145899999998754
Q ss_pred cc---c-ccceEEEeccCCCCCCCCCHHHHHHHHHhccCCC----CCCHHHHHHHHHHHHHHcCCC-ccccccccCCCCC
Q 000808 758 QE---T-FTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPP----EVDSETQKMFIEEIMELVELN-PLRQSLVGLPGES 828 (1275)
Q Consensus 758 ~~---~-~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~----~~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~~~ 828 (1275)
.. . .+..++|++|++.+++.+|++|++.+........ ..+.++..++++++++.+++. +..+..++ .
T Consensus 68 ~~~~~~~~~~~i~~v~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~----~ 143 (243)
T TIGR01978 68 ELEPDERARAGLFLAFQYPEEIPGVSNLEFLRSALNARRSARGEEPLDLLDFLKLLKAKLALLGMDEEFLNRSVN----E 143 (243)
T ss_pred CCCHHHhhccceEeeeccccccCCcCHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHcCCchhhcccccc----c
Confidence 31 1 2234899999999999999999998764322110 112233345688999999997 35555442 2
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHh-hhhhheeecCc
Q 000808 829 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFES-FDELFLMKRGG 907 (1275)
Q Consensus 829 ~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~-~d~~~~l~~gg 907 (1275)
.||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|++++++|+|||+++|+++ .+... +|++++|++ |
T Consensus 144 ~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~-~~~~~~~d~i~~l~~-G 221 (243)
T TIGR01978 144 GFSGGEKKRNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQR-LLNYIKPDYVHVLLD-G 221 (243)
T ss_pred CcCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHH-HHHhhcCCeEEEEeC-C
Confidence 49999999999999999999999999999999999999999999998777899999999985 45556 799999985 7
Q ss_pred EEEEECCC
Q 000808 908 QEIYVGPL 915 (1275)
Q Consensus 908 ~~~~~g~~ 915 (1275)
++++.|++
T Consensus 222 ~i~~~g~~ 229 (243)
T TIGR01978 222 RIVKSGDV 229 (243)
T ss_pred EEEEecCH
Confidence 89999876
No 164
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=7.7e-36 Score=333.42 Aligned_cols=214 Identities=23% Similarity=0.312 Sum_probs=179.5
Q ss_pred EEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCC
Q 000808 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1275)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 757 (1275)
++++|+++.+. ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 1 i~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~i~ 65 (252)
T TIGR03005 1 VRFSDVTKRFG-------------ILTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEP--IDEGQIQVEGEQLY 65 (252)
T ss_pred CEEEEEEEEeC-------------CeeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcc
Confidence 35788888763 2359999999999999999999999999999999999865 34899999998753
Q ss_pred c----------------ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCcccccc
Q 000808 758 Q----------------ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSL 821 (1275)
Q Consensus 758 ~----------------~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~ 821 (1275)
. ...++.++|++|++.+++..|+.||+.+..... ........++.++++++.+|+.+..+..
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~~ 143 (252)
T TIGR03005 66 HMPGRNGPLVPADEKHLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLV--LGMARAEAEKRAMELLDMVGLADKADHM 143 (252)
T ss_pred ccccccccccccchhHHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHh--cCCCHHHHHHHHHHHHHHcCChhHhhcC
Confidence 2 123567999999999999999999998753211 1123344456688999999998776665
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhhhh
Q 000808 822 VGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDEL 900 (1275)
Q Consensus 822 ~~~~~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~ 900 (1275)
. +.||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++.++ |+|||++||+++ ++...+|++
T Consensus 144 ~-----~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~-~~~~~~d~i 217 (252)
T TIGR03005 144 P-----AQLSGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMG-FAREFADRV 217 (252)
T ss_pred h-----hhcCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHhcCEE
Confidence 4 479999999999999999999999999999999999999999999998765 899999999986 566789999
Q ss_pred heeecCcEEEEECCC
Q 000808 901 FLMKRGGQEIYVGPL 915 (1275)
Q Consensus 901 ~~l~~gg~~~~~g~~ 915 (1275)
++|++ |+++..|+.
T Consensus 218 ~~l~~-G~i~~~g~~ 231 (252)
T TIGR03005 218 CFFDK-GRIVEQGKP 231 (252)
T ss_pred EEEEC-CEEEEeCCH
Confidence 99986 789998875
No 165
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=8.1e-36 Score=333.50 Aligned_cols=214 Identities=25% Similarity=0.356 Sum_probs=179.0
Q ss_pred EEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCC
Q 000808 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1275)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 757 (1275)
++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--p~~G~i~~~g~~~~ 67 (258)
T PRK13548 3 LEARNLSVRLG-------------GRTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELS--PDSGEVRLNGRPLA 67 (258)
T ss_pred EEEEeEEEEeC-------------CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEEcc
Confidence 67888888763 2459999999999999999999999999999999999865 35799999998753
Q ss_pred c---ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHH
Q 000808 758 Q---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQ 834 (1275)
Q Consensus 758 ~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGe 834 (1275)
. ...++.++|++|++.+++.+||+||+.+..... ....+..++.++++++.+|+.+..++.+ ..|||||
T Consensus 68 ~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgGe 139 (258)
T PRK13548 68 DWSPAELARRRAVLPQHSSLSFPFTVEEVVAMGRAPH---GLSRAEDDALVAAALAQVDLAHLAGRDY-----PQLSGGE 139 (258)
T ss_pred cCCHHHhhhheEEEccCCcCCCCCCHHHHHHhhhccc---CCCcHHHHHHHHHHHHHcCCHhHhcCCc-----ccCCHHH
Confidence 2 223456899999988888899999998754321 1122233456788999999987777765 4799999
Q ss_pred HHHHHHHHHHh------hCCcEEEEeCCCCCCCHHHHHHHHHHHHHHh-hCCCEEEEEecCCCHHHHHhhhhhheeecCc
Q 000808 835 RKRLTIAVELV------ANPSIIFMDEPTSGLDARAAAIVMRTVRNTV-DTGRTVVCTIHQPSIDIFESFDELFLMKRGG 907 (1275)
Q Consensus 835 rqrv~ia~~l~------~~p~illlDEPtsgLD~~~~~~i~~~l~~~~-~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg 907 (1275)
|||++||++|+ .+|++|+|||||+|||+.++..+.+.|+++. ++|+|||+++|++. ++...+|++++|.+ |
T Consensus 140 ~qrv~la~al~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G 217 (258)
T PRK13548 140 QQRVQLARVLAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLN-LAARYADRIVLLHQ-G 217 (258)
T ss_pred HHHHHHHHHHhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhcCEEEEEEC-C
Confidence 99999999999 5999999999999999999999999999987 56899999999975 56678999999986 7
Q ss_pred EEEEECCCC
Q 000808 908 QEIYVGPLG 916 (1275)
Q Consensus 908 ~~~~~g~~~ 916 (1275)
+++..|+.+
T Consensus 218 ~i~~~~~~~ 226 (258)
T PRK13548 218 RLVADGTPA 226 (258)
T ss_pred EEEeeCCHH
Confidence 899988763
No 166
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.9e-37 Score=306.12 Aligned_cols=194 Identities=24% Similarity=0.357 Sum_probs=154.1
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCC--CCCceeEEEEECCccCCCc-----cccceEEEeccccccCCCCCHHHHHHHHHh
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLD--SKLKFSGRVTYNGHGMDEF-----VPQRTAAYISQHDVHIGEMTVRETLAFSAR 73 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~--~~~~~~G~v~~~g~~~~~~-----~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~ 73 (1275)
+||++|||||||||||+++....+ |..+.+|+|.++|+++.+. ..|+.+|+|+|.|.-|| +|++||+.|+.+
T Consensus 35 VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d~~~lRr~vGMVFQkPnPFp-~SIydNVayG~r 113 (253)
T COG1117 35 VTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVDVVELRRRVGMVFQKPNPFP-MSIYDNVAYGLR 113 (253)
T ss_pred eEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCCHHHHHHHheeeccCCCCCC-chHHHHHHHhHH
Confidence 589999999999999999987644 5667899999999998543 34689999999999998 899999999999
Q ss_pred ccCCCCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCcc-ccccccCCCccccccccccch
Q 000808 74 CQGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEV-CDDTLVGDEMVRGISGGQKKR 152 (1275)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~-~~~t~vg~~~~~~LSGGqrqR 152 (1275)
+++... + ++.+ +++.-|+.-+|-+ ..|.+ ++...+|||||+||
T Consensus 114 ~~g~~~--~---~lde-----------------------------iVe~sLk~AaLWdEVKDrL--~~sa~~LSGGQQQR 157 (253)
T COG1117 114 LHGIKD--K---ELDE-----------------------------IVESSLKKAALWDEVKDRL--HKSALGLSGGQQQR 157 (253)
T ss_pred hhccch--H---HHHH-----------------------------HHHHHHHHhHhHHHhHHHh--hCCccCCChhHHHH
Confidence 876422 1 1111 1111121111111 11111 23455799999999
Q ss_pred hhHHHHHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhh
Q 000808 153 VTTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPREL 232 (1275)
Q Consensus 153 vsiA~al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~ 232 (1275)
++|||||+-+|+|||||||||+|||.+...|.+++.++.+ .-+|++++|++.++.+..|+...+..|++++.|+.++
T Consensus 158 LcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~---~yTIviVTHnmqQAaRvSD~taFf~~G~LvE~g~T~~ 234 (253)
T COG1117 158 LCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELKK---KYTIVIVTHNMQQAARVSDYTAFFYLGELVEFGPTDK 234 (253)
T ss_pred HHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHh---ccEEEEEeCCHHHHHHHhHhhhhhcccEEEEEcCHHh
Confidence 9999999999999999999999999999999999998753 4566668999999999999999999999999999988
Q ss_pred HH
Q 000808 233 VL 234 (1275)
Q Consensus 233 ~~ 234 (1275)
+.
T Consensus 235 iF 236 (253)
T COG1117 235 IF 236 (253)
T ss_pred hh
Confidence 74
No 167
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-35 Score=332.55 Aligned_cols=215 Identities=22% Similarity=0.249 Sum_probs=176.4
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCc---eEEEEEEEcC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITISG 753 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~---~~~G~i~~~g 753 (1275)
-++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..++. +.+|+|.++|
T Consensus 7 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 73 (254)
T PRK14273 7 IIETENLNLFYT-------------DFKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEG 73 (254)
T ss_pred eEEEeeeEEEeC-------------CceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECC
Confidence 588999998873 235999999999999999999999999999999999976531 2479999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCC----ccccccccC
Q 000808 754 YPKKQ-----ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELN----PLRQSLVGL 824 (1275)
Q Consensus 754 ~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~----~~~~~~~~~ 824 (1275)
.++.. ...++.++|++|++.+++ +||+||+.+...... .......+++++++++.+++. +..++.
T Consensus 74 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 147 (254)
T PRK14273 74 KNIYSNNFDILELRRKIGMVFQTPNPFL-MSIYDNISYGPKIHG--TKDKKKLDEIVEQSLKKSALWNEVKDKLNTN--- 147 (254)
T ss_pred EecccccccHHHHhhceEEEeecccccc-CcHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHhCCchhhHHHHhCC---
Confidence 87531 124567999999988775 899999988654321 112333456678889998873 233443
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheee
Q 000808 825 PGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMK 904 (1275)
Q Consensus 825 ~~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~ 904 (1275)
.+.||||||||++|||+|+.+|++|+|||||+|||+.++..+++.|+++.+ ++|||+++|+++ ++.+.+|++++|+
T Consensus 148 --~~~LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tvii~sH~~~-~~~~~~d~i~~l~ 223 (254)
T PRK14273 148 --ALSLSGGQQQRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLKE-SYTIIIVTHNMQ-QAGRISDRTAFFL 223 (254)
T ss_pred --cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEEEEE
Confidence 357999999999999999999999999999999999999999999999864 799999999986 5678899999998
Q ss_pred cCcEEEEECCC
Q 000808 905 RGGQEIYVGPL 915 (1275)
Q Consensus 905 ~gg~~~~~g~~ 915 (1275)
+ |+++..|++
T Consensus 224 ~-G~i~~~g~~ 233 (254)
T PRK14273 224 N-GCIEEESST 233 (254)
T ss_pred C-CEEEEeCCH
Confidence 5 799999876
No 168
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.4e-36 Score=334.10 Aligned_cols=218 Identities=22% Similarity=0.261 Sum_probs=180.0
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 756 (1275)
.++++|+++.+. ++++|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~ 69 (255)
T PRK11300 5 LLSVSGLMMRFG-------------GLLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYK--PTGGTILLRGQHI 69 (255)
T ss_pred eEEEeeEEEEEC-------------CEEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcC--CCcceEEECCEEC
Confidence 488999998763 2469999999999999999999999999999999999865 3589999999876
Q ss_pred Ccc---c-ccceEEEeccCCCCCCCCCHHHHHHHHHhccCC----------C--CCCHHHHHHHHHHHHHHcCCCccccc
Q 000808 757 KQE---T-FTRISGYCEQNDIHSPFVTVYESLLYSAWLRLP----------P--EVDSETQKMFIEEIMELVELNPLRQS 820 (1275)
Q Consensus 757 ~~~---~-~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~----------~--~~~~~~~~~~~~~~l~~l~l~~~~~~ 820 (1275)
... . .+..++|++|++.+++.+|++||+.+....... . .....+..+.++++++.+|+.+..+.
T Consensus 70 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~ 149 (255)
T PRK11300 70 EGLPGHQIARMGVVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEALDRAATWLERVGLLEHANR 149 (255)
T ss_pred CCCCHHHHHhcCeEEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHHHHHHHHHHHhCChhhhhhC
Confidence 431 1 233479999999999999999999876431110 0 00112234567888999999877776
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhhh
Q 000808 821 LVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDE 899 (1275)
Q Consensus 821 ~~~~~~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~ 899 (1275)
.+ +.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|+
T Consensus 150 ~~-----~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~-~~~~~~d~ 223 (255)
T PRK11300 150 QA-----GNLAYGQQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMK-LVMGISDR 223 (255)
T ss_pred Ch-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHH-HHHHhCCE
Confidence 65 469999999999999999999999999999999999999999999998765 899999999975 56788999
Q ss_pred hheeecCcEEEEECCCC
Q 000808 900 LFLMKRGGQEIYVGPLG 916 (1275)
Q Consensus 900 ~~~l~~gg~~~~~g~~~ 916 (1275)
+++|++ |++++.|+++
T Consensus 224 i~~l~~-g~i~~~~~~~ 239 (255)
T PRK11300 224 IYVVNQ-GTPLANGTPE 239 (255)
T ss_pred EEEEEC-CeEEecCCHH
Confidence 999986 7899998863
No 169
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-35 Score=331.61 Aligned_cols=217 Identities=23% Similarity=0.278 Sum_probs=178.7
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCc---eEEEEEEEcC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITISG 753 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~---~~~G~i~~~g 753 (1275)
.++++|+++.+. ++.+|+|+|+++++||+++|+||||||||||+++|+|..++. +.+|+|.++|
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g 69 (250)
T PRK14247 3 KIEIRDLKVSFG-------------QVEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDG 69 (250)
T ss_pred eEEEEeeEEEEC-------------CeeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECC
Confidence 478899988763 235999999999999999999999999999999999976421 3589999999
Q ss_pred ccCCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCc----cccccccCCC
Q 000808 754 YPKKQ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNP----LRQSLVGLPG 826 (1275)
Q Consensus 754 ~~~~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~----~~~~~~~~~~ 826 (1275)
.++.. ..+++.++|++|++.+++.+||.||+.+....+.. .....+.++.++++++.+|+.+ ..++.+
T Consensus 70 ~~i~~~~~~~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~---- 144 (250)
T PRK14247 70 QDIFKMDVIELRRRVQMVFQIPNPIPNLSIFENVALGLKLNRL-VKSKKELQERVRWALEKAQLWDEVKDRLDAPA---- 144 (250)
T ss_pred EECCcCCHHHHhccEEEEeccCccCCCCcHHHHHHHHHHhccc-cCCHHHHHHHHHHHHHHcCCCcchhhhhcCCc----
Confidence 87642 23456789999999888899999999886543211 1123344566889999999854 233333
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecC
Q 000808 827 ESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRG 906 (1275)
Q Consensus 827 ~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~g 906 (1275)
..||||||||++|||||+.+|++++|||||+|||+.++..+.+.|+++.+ |+|||+++|+++ ++.+.+|++++|++
T Consensus 145 -~~LSgG~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~~- 220 (250)
T PRK14247 145 -GKLSGGQQQRLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKK-DMTIVLVTHFPQ-QAARISDYVAFLYK- 220 (250)
T ss_pred -ccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCEEEEEEC-
Confidence 57999999999999999999999999999999999999999999999864 899999999986 56678999999985
Q ss_pred cEEEEECCC
Q 000808 907 GQEIYVGPL 915 (1275)
Q Consensus 907 g~~~~~g~~ 915 (1275)
|+++..|++
T Consensus 221 G~i~~~g~~ 229 (250)
T PRK14247 221 GQIVEWGPT 229 (250)
T ss_pred CeEEEECCH
Confidence 789998876
No 170
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-35 Score=332.53 Aligned_cols=217 Identities=24% Similarity=0.268 Sum_probs=178.4
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCc---eEEEEEEEcC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITISG 753 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~---~~~G~i~~~g 753 (1275)
.++++|+++++. ++.+|+|+|+++++||+++|+||||||||||+++|+|..++. +.+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g 70 (253)
T PRK14267 4 AIETVNLRVYYG-------------SNHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFG 70 (253)
T ss_pred eEEEEeEEEEeC-------------CeeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECC
Confidence 478899998873 235999999999999999999999999999999999986532 2489999999
Q ss_pred ccCC--c---ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCc----cccccccC
Q 000808 754 YPKK--Q---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNP----LRQSLVGL 824 (1275)
Q Consensus 754 ~~~~--~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~----~~~~~~~~ 824 (1275)
.++. . ..+++.++|++|++.+++.+|+.||+.+....+. .....++.+++++++++.+++.+ ..+..
T Consensus 71 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~-~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 146 (253)
T PRK14267 71 RNIYSPDVDPIEVRREVGMVFQYPNPFPHLTIYDNVAIGVKLNG-LVKSKKELDERVEWALKKAALWDEVKDRLNDY--- 146 (253)
T ss_pred EEccccccChHHHhhceeEEecCCccCCCCcHHHHHHHHHHhcC-ccCCHHHHHHHHHHHHHHcCCccchhhhhccC---
Confidence 8763 1 1345678999999999999999999987654321 11123344456788999999853 22333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheee
Q 000808 825 PGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMK 904 (1275)
Q Consensus 825 ~~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~ 904 (1275)
...||||||||++|||||+.+|++++|||||+|||+.++..+.+.|+++++ ++|||+++|+++ ++...+|++++|+
T Consensus 147 --~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~ 222 (253)
T PRK14267 147 --PSNLSGGQRQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKK-EYTIVLVTHSPA-QAARVSDYVAFLY 222 (253)
T ss_pred --hhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhh-CCEEEEEECCHH-HHHhhCCEEEEEE
Confidence 357999999999999999999999999999999999999999999999865 699999999986 5677899999998
Q ss_pred cCcEEEEECCC
Q 000808 905 RGGQEIYVGPL 915 (1275)
Q Consensus 905 ~gg~~~~~g~~ 915 (1275)
+ |+++..|++
T Consensus 223 ~-G~i~~~~~~ 232 (253)
T PRK14267 223 L-GKLIEVGPT 232 (253)
T ss_pred C-CEEEEeCCH
Confidence 6 799999886
No 171
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=2.7e-36 Score=291.03 Aligned_cols=197 Identities=25% Similarity=0.381 Sum_probs=169.5
Q ss_pred cccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCCc-------ccccceEEEeccCCC
Q 000808 701 DKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ-------ETFTRISGYCEQNDI 773 (1275)
Q Consensus 701 ~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~-------~~~~~~~~~v~q~~~ 773 (1275)
+...||++|++.|++||.+||+|||||||||||-+|+|...+ .+|+|.+.|++... ....+.+|+|+|...
T Consensus 21 ~~l~IL~~V~L~v~~Ge~vaiVG~SGSGKSTLl~vlAGLd~~--ssGeV~l~G~~L~~ldEd~rA~~R~~~vGfVFQSF~ 98 (228)
T COG4181 21 GELSILKGVELVVKRGETVAIVGPSGSGKSTLLAVLAGLDDP--SSGEVRLLGQPLHKLDEDARAALRARHVGFVFQSFH 98 (228)
T ss_pred cceeEeecceEEecCCceEEEEcCCCCcHHhHHHHHhcCCCC--CCceEEEcCcchhhcCHHHHHHhhccceeEEEEeee
Confidence 456799999999999999999999999999999999998763 48999999998643 123467999999999
Q ss_pred CCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEE
Q 000808 774 HSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFM 853 (1275)
Q Consensus 774 ~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~~l~~~p~illl 853 (1275)
+.|++|..||+.....++.... .+..+...+.++.+||.+-.+.+. .+|||||+|||+||||++..|+|||.
T Consensus 99 Lip~ltAlENV~lPleL~ge~~---~~~~~~A~~lL~~vGLg~Rl~HyP-----~qLSGGEQQRVAiARAfa~~P~vLfA 170 (228)
T COG4181 99 LIPNLTALENVALPLELRGESS---ADSRAGAKALLEAVGLGKRLTHYP-----AQLSGGEQQRVALARAFAGRPDVLFA 170 (228)
T ss_pred ccccchhhhhccchhhhcCCcc---ccHHHHHHHHHHHhCcccccccCc-----cccCchHHHHHHHHHHhcCCCCEEec
Confidence 9999999999998887764322 223345678999999988776664 47999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHhh-CCCEEEEEecCCCHHHHHhhhhhheeecCcEEE
Q 000808 854 DEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFESFDELFLMKRGGQEI 910 (1275)
Q Consensus 854 DEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~ 910 (1275)
||||-+||..+...|.++|-.+.+ .|.|.|++||||. +...|||.+-|.. |+++
T Consensus 171 DEPTGNLD~~Tg~~iaDLlF~lnre~G~TlVlVTHD~~--LA~Rc~R~~r~~~-G~l~ 225 (228)
T COG4181 171 DEPTGNLDRATGDKIADLLFALNRERGTTLVLVTHDPQ--LAARCDRQLRLRS-GRLV 225 (228)
T ss_pred cCCCCCcchhHHHHHHHHHHHHhhhcCceEEEEeCCHH--HHHhhhheeeeec-ceec
Confidence 999999999999999999988865 4999999999975 6789999999986 6765
No 172
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.2e-36 Score=349.45 Aligned_cols=214 Identities=26% Similarity=0.442 Sum_probs=180.5
Q ss_pred CcEEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCc
Q 000808 675 PHSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGY 754 (1275)
Q Consensus 675 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~ 754 (1275)
+.+++.+|+++.++ +++++++|+|++++||+.+||+|+||||||||+++|+|..++ .+|+|.+||.
T Consensus 318 ~~ei~~~~l~~~y~------------~g~~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~--~~G~I~vng~ 383 (559)
T COG4988 318 PIEISLENLSFRYP------------DGKPALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAP--TQGEIRVNGI 383 (559)
T ss_pred CceeeecceEEecC------------CCCcccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCC--CCceEEECCc
Confidence 45677779998875 234799999999999999999999999999999999998773 5899999998
Q ss_pred cCC---cccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCcccc------ccccCC
Q 000808 755 PKK---QETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQ------SLVGLP 825 (1275)
Q Consensus 755 ~~~---~~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~------~~~~~~ 825 (1275)
+.. ...++++++||+|++.+++ -|++||+.++. + +.+ ++.+.++++..++.+..+ +.+|.
T Consensus 384 ~l~~l~~~~~~k~i~~v~Q~p~lf~-gTireNi~l~~----~-~~s----~e~i~~al~~a~l~~~v~~p~GLdt~ige- 452 (559)
T COG4988 384 DLRDLSPEAWRKQISWVSQNPYLFA-GTIRENILLAR----P-DAS----DEEIIAALDQAGLLEFVPKPDGLDTVIGE- 452 (559)
T ss_pred cccccCHHHHHhHeeeeCCCCcccc-ccHHHHhhccC----C-cCC----HHHHHHHHHHhcHHHhhcCCCcccchhcc-
Confidence 764 3568899999999998886 59999998752 1 222 334677888888876554 44443
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeec
Q 000808 826 GESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKR 905 (1275)
Q Consensus 826 ~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~ 905 (1275)
+.++|||||+|||++||||+++++++++||||++||.++.+.|++.|.++++ ++|||++||++. ....+|+|++|++
T Consensus 453 ~G~~LSgGQ~QRlaLARAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~-~ktvl~itHrl~--~~~~~D~I~vld~ 529 (559)
T COG4988 453 GGAGLSGGQAQRLALARALLSPASLLLLDEPTAHLDAETEQIILQALQELAK-QKTVLVITHRLE--DAADADRIVVLDN 529 (559)
T ss_pred CCCCCCHHHHHHHHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHh-CCeEEEEEcChH--HHhcCCEEEEecC
Confidence 4568999999999999999999999999999999999999999999999986 599999999974 5677899999996
Q ss_pred CcEEEEECCCCc
Q 000808 906 GGQEIYVGPLGR 917 (1275)
Q Consensus 906 gg~~~~~g~~~~ 917 (1275)
|+++..|..++
T Consensus 530 -G~l~~~g~~~~ 540 (559)
T COG4988 530 -GRLVEQGTHEE 540 (559)
T ss_pred -CceeccCCHHH
Confidence 79999998743
No 173
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.4e-37 Score=303.35 Aligned_cols=191 Identities=30% Similarity=0.335 Sum_probs=167.3
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCC--ccccceEEEeccccccCCCCCHHHHHHHHHhccCCC
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDE--FVPQRTAAYISQHDVHIGEMTVRETLAFSARCQGVG 78 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~--~~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~ 78 (1275)
+|+|+|||||||||+|++|++++.|+ +|+|+++|.+... ...++.+|.++.+..++..+|++|||.|.+++.++.
T Consensus 30 i~GlLG~NGAGKTT~LRmiatlL~P~---~G~v~idg~d~~~~p~~vrr~IGVl~~e~glY~RlT~rEnl~~Fa~L~~l~ 106 (245)
T COG4555 30 ITGLLGENGAGKTTLLRMIATLLIPD---SGKVTIDGVDTVRDPSFVRRKIGVLFGERGLYARLTARENLKYFARLNGLS 106 (245)
T ss_pred EEEEEcCCCCCchhHHHHHHHhccCC---CceEEEeecccccChHHHhhhcceecCCcChhhhhhHHHHHHHHHHHhhhh
Confidence 58999999999999999999999998 9999999988743 334688999998889999999999999999876542
Q ss_pred CcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhhHHHH
Q 000808 79 SRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEM 158 (1275)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~a 158 (1275)
. .+.+.+.+++.+.|+|.++.|+++| ++|-||||||+||||
T Consensus 107 ~----------------------------------~~~kari~~l~k~l~l~~~~~rRv~-----~~S~G~kqkV~iARA 147 (245)
T COG4555 107 R----------------------------------KEIKARIAELSKRLQLLEYLDRRVG-----EFSTGMKQKVAIARA 147 (245)
T ss_pred h----------------------------------hHHHHHHHHHHHHhChHHHHHHHHh-----hhchhhHHHHHHHHH
Confidence 1 1122346778899999999998877 599999999999999
Q ss_pred HhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhhHHH
Q 000808 159 MVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVLD 235 (1275)
Q Consensus 159 l~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~~~~ 235 (1275)
|+++|++++|||||||||..++..+.+.+++... .+.+|+..+|.++|+..+||+|+++.+|++++.|+.+.+..
T Consensus 148 lvh~P~i~vlDEP~sGLDi~~~r~~~dfi~q~k~--egr~viFSSH~m~EvealCDrvivlh~Gevv~~gs~~~l~~ 222 (245)
T COG4555 148 LVHDPSILVLDEPTSGLDIRTRRKFHDFIKQLKN--EGRAVIFSSHIMQEVEALCDRVIVLHKGEVVLEGSIEALDA 222 (245)
T ss_pred HhcCCCeEEEcCCCCCccHHHHHHHHHHHHHhhc--CCcEEEEecccHHHHHHhhheEEEEecCcEEEcCCHHHHHH
Confidence 9999999999999999999999999999988643 35677778999999999999999999999999999988764
No 174
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=1.1e-35 Score=330.43 Aligned_cols=216 Identities=25% Similarity=0.308 Sum_probs=178.9
Q ss_pred EEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCC
Q 000808 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1275)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 757 (1275)
++++|+++.++ ++.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+..
T Consensus 3 i~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~ 67 (242)
T TIGR03411 3 LYLEGLSVSFD-------------GFKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTR--PDEGSVLFGGTDLT 67 (242)
T ss_pred EEEEeeEEEcC-------------CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCCeEEECCeecC
Confidence 67888887763 2359999999999999999999999999999999999865 34799999998754
Q ss_pred cc----cccceEEEeccCCCCCCCCCHHHHHHHHHhccCC-----CCCCHHHHHHHHHHHHHHcCCCccccccccCCCCC
Q 000808 758 QE----TFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLP-----PEVDSETQKMFIEEIMELVELNPLRQSLVGLPGES 828 (1275)
Q Consensus 758 ~~----~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~-----~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~ 828 (1275)
.. ..++.++|++|++.+++.+|++||+.+....... .....++.+++++++++.+|+.+..+..+ +
T Consensus 68 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~ 142 (242)
T TIGR03411 68 GLPEHQIARAGIGRKFQKPTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETIGLADEADRLA-----G 142 (242)
T ss_pred CCCHHHHHhcCeeEeccccccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHcCCchhhcCCh-----h
Confidence 21 1234699999999999999999999876432100 00112334557889999999988777665 4
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcE
Q 000808 829 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQ 908 (1275)
Q Consensus 829 ~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~ 908 (1275)
.||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|+++ ++.+.+|++++|++ |+
T Consensus 143 ~LS~Ge~qrv~laral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~i~~l~~-g~ 219 (242)
T TIGR03411 143 LLSHGQKQWLEIGMLLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAG-KHSVVVVEHDME-FVRSIADKVTVLHQ-GS 219 (242)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhc-CCEEEEEECCHH-HHHHhCCEEEEEEC-Ce
Confidence 6999999999999999999999999999999999999999999999876 789999999975 56678999999986 78
Q ss_pred EEEECCCC
Q 000808 909 EIYVGPLG 916 (1275)
Q Consensus 909 ~~~~g~~~ 916 (1275)
++..|+.+
T Consensus 220 ~~~~~~~~ 227 (242)
T TIGR03411 220 VLAEGSLD 227 (242)
T ss_pred EEeeCCHH
Confidence 89888763
No 175
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.4e-36 Score=334.44 Aligned_cols=217 Identities=26% Similarity=0.345 Sum_probs=179.8
Q ss_pred EEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCC
Q 000808 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1275)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 757 (1275)
++++|+++++. ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 67 (255)
T PRK11231 3 LRTENLTVGYG-------------TKRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLT--PQSGTVFLGDKPIS 67 (255)
T ss_pred EEEEeEEEEEC-------------CEEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCCcEEEECCEEhH
Confidence 67888888763 2469999999999999999999999999999999999765 34799999998753
Q ss_pred c---ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCC-CCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHH
Q 000808 758 Q---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLP-PEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTE 833 (1275)
Q Consensus 758 ~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~-~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgG 833 (1275)
. ...++.++|++|+..+++.+|+.||+.++...... .....+..+++++++++.+|+.+..++.+ ..||||
T Consensus 68 ~~~~~~~~~~i~~~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G 142 (255)
T PRK11231 68 MLSSRQLARRLALLPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQTRINHLADRRL-----TDLSGG 142 (255)
T ss_pred HCCHHHHhhheEEecccCCCCCCccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHcCCHHHHcCCc-----ccCCHH
Confidence 2 22345689999999888889999999875311000 01111233456788999999987777665 469999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcEEEEEC
Q 000808 834 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVG 913 (1275)
Q Consensus 834 erqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g 913 (1275)
||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|+++ ++.+.+|++++|++ |+++..|
T Consensus 143 ~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~-~~~~~~d~i~~l~~-G~i~~~~ 220 (255)
T PRK11231 143 QRQRAFLAMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLN-QASRYCDHLVVLAN-GHVMAQG 220 (255)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHH-HHHHhcCEEEEEEC-CeEEEEc
Confidence 999999999999999999999999999999999999999998777899999999986 57789999999986 7899998
Q ss_pred CCC
Q 000808 914 PLG 916 (1275)
Q Consensus 914 ~~~ 916 (1275)
+.+
T Consensus 221 ~~~ 223 (255)
T PRK11231 221 TPE 223 (255)
T ss_pred CHH
Confidence 874
No 176
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.6e-36 Score=324.46 Aligned_cols=208 Identities=25% Similarity=0.334 Sum_probs=171.4
Q ss_pred EEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCCc
Q 000808 679 TFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 758 (1275)
Q Consensus 679 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 758 (1275)
+++|++++++ ++. .|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~--~~~G~i~~~g~~~~~ 64 (211)
T cd03298 2 RLDKIRFSYG-------------EQP--MHFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFET--PQSGRVLINGVDVTA 64 (211)
T ss_pred EEEeEEEEeC-------------CEe--cceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcCc
Confidence 5778887763 112 39999999999999999999999999999999875 348999999987643
Q ss_pred -ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHH
Q 000808 759 -ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKR 837 (1275)
Q Consensus 759 -~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqr 837 (1275)
...++.++|++|++.+++.+|++||+.+....+. .. .+..+++++++++.+++.+..++.+ ..||||||||
T Consensus 65 ~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~--~~-~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qr 136 (211)
T cd03298 65 APPADRPVSMLFQENNLFAHLTVEQNVGLGLSPGL--KL-TAEDRQAIEVALARVGLAGLEKRLP-----GELSGGERQR 136 (211)
T ss_pred CCHhHccEEEEecccccCCCCcHHHHHhccccccc--Cc-cHHHHHHHHHHHHHcCCHHHHhCCc-----ccCCHHHHHH
Confidence 1234578999999999999999999987543211 11 1233456889999999987777765 4799999999
Q ss_pred HHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhhhhheeecCcEEEEEC
Q 000808 838 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVG 913 (1275)
Q Consensus 838 v~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g 913 (1275)
++|||+|+.+|++++|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |+++..|
T Consensus 137 v~ia~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~~~ 211 (211)
T cd03298 137 VALARVLVRDKPVLLLDEPFAALDPALRAEMLDLVLDLHAETKMTVLMVTHQPE-DAKRLAQRVVFLDN-GRIAAQG 211 (211)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHhhhCEEEEEEC-CEEeecC
Confidence 99999999999999999999999999999999999998754 899999999975 56678999999986 7877654
No 177
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-35 Score=335.41 Aligned_cols=216 Identities=25% Similarity=0.308 Sum_probs=181.7
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 756 (1275)
-++++|+++.+.. ..+.+|+|+|++|++||+++|+||||||||||+++|+|..++ .+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~~-----------~~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p--~~G~i~~~g~~i 71 (279)
T PRK13635 5 IIRVEHISFRYPD-----------AATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLP--EAGTITVGGMVL 71 (279)
T ss_pred eEEEEEEEEEeCC-----------CCccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCC--CCcEEEECCEEC
Confidence 4789999988731 124599999999999999999999999999999999998763 489999999876
Q ss_pred Cc---ccccceEEEeccCCC-CCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCH
Q 000808 757 KQ---ETFTRISGYCEQNDI-HSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLST 832 (1275)
Q Consensus 757 ~~---~~~~~~~~~v~q~~~-~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSg 832 (1275)
.. ...++.++|++|++. .++..||.||+.+..... ....++.+++++++++.+||.+..++.+ ..|||
T Consensus 72 ~~~~~~~~~~~i~~~~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LS~ 143 (279)
T PRK13635 72 SEETVWDVRRQVGMVFQNPDNQFVGATVQDDVAFGLENI---GVPREEMVERVDQALRQVGMEDFLNREP-----HRLSG 143 (279)
T ss_pred CcCcHHHHhhheEEEEeCHHHhcccccHHHHHhhhHhhC---CCCHHHHHHHHHHHHHHcCChhhhhCCc-----ccCCH
Confidence 43 223567899999973 666789999998765432 2234445567899999999988877765 46999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhhhhheeecCcEEEE
Q 000808 833 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDELFLMKRGGQEIY 911 (1275)
Q Consensus 833 Gerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~ 911 (1275)
|||||++|||+|+.+|++|+|||||+|||+.++..+++.|++++++ |+|||+++|+++ ++ ..+|++++|.+ |++++
T Consensus 144 G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~-~~-~~~d~i~~l~~-G~i~~ 220 (279)
T PRK13635 144 GQKQRVAIAGVLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLD-EA-AQADRVIVMNK-GEILE 220 (279)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHH-HH-HcCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999875 899999999986 34 46999999986 78999
Q ss_pred ECCCC
Q 000808 912 VGPLG 916 (1275)
Q Consensus 912 ~g~~~ 916 (1275)
.|+.+
T Consensus 221 ~g~~~ 225 (279)
T PRK13635 221 EGTPE 225 (279)
T ss_pred ECCHH
Confidence 99864
No 178
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.6e-36 Score=335.70 Aligned_cols=213 Identities=24% Similarity=0.361 Sum_probs=177.4
Q ss_pred EEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCC
Q 000808 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1275)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 757 (1275)
++++|+++++. ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~ 66 (271)
T PRK13638 2 LATSDLWFRYQ-------------DEPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLR--PQKGAVLWQGKPLD 66 (271)
T ss_pred eEEEEEEEEcC-------------CcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCccEEEECCEEcc
Confidence 56788888763 2459999999999999999999999999999999999865 34899999998763
Q ss_pred c-----ccccceEEEeccCCCC-CCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCC
Q 000808 758 Q-----ETFTRISGYCEQNDIH-SPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLS 831 (1275)
Q Consensus 758 ~-----~~~~~~~~~v~q~~~~-~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lS 831 (1275)
. ...++.++|++|++.. +...|+.||+.+..... ....++.+++++++++.+|+.+..++.+ ..||
T Consensus 67 ~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 138 (271)
T PRK13638 67 YSKRGLLALRQQVATVFQDPEQQIFYTDIDSDIAFSLRNL---GVPEAEITRRVDEALTLVDAQHFRHQPI-----QCLS 138 (271)
T ss_pred cccCCHHHHHhheEEEeeChhhccccccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCHhHhcCCc-----hhCC
Confidence 1 1234578999999753 34568999998764332 2233444556788999999988777665 4799
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcEEEE
Q 000808 832 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQEIY 911 (1275)
Q Consensus 832 gGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~ 911 (1275)
||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|+++ ++.+.+|++++|.+ |+++.
T Consensus 139 gG~~qrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~-~~~~~~d~i~~l~~-G~i~~ 216 (271)
T PRK13638 139 HGQKKRVAIAGALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDID-LIYEISDAVYVLRQ-GQILT 216 (271)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 99999999999999999999999999999999999999999998777899999999985 46678999999986 78999
Q ss_pred ECCC
Q 000808 912 VGPL 915 (1275)
Q Consensus 912 ~g~~ 915 (1275)
.|++
T Consensus 217 ~g~~ 220 (271)
T PRK13638 217 HGAP 220 (271)
T ss_pred eCCH
Confidence 9976
No 179
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2.1e-36 Score=319.93 Aligned_cols=202 Identities=24% Similarity=0.296 Sum_probs=182.9
Q ss_pred ceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCCc-------ccccceEEEeccCCCCCC
Q 000808 704 MLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ-------ETFTRISGYCEQNDIHSP 776 (1275)
Q Consensus 704 ~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~-------~~~~~~~~~v~q~~~~~~ 776 (1275)
.-++|+|++|+.||++.|||-||||||||+++|.+..+ +..|+|.++|.++.. ...++.++.|+|...++|
T Consensus 42 vGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLie--pt~G~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaLlP 119 (386)
T COG4175 42 VGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIE--PTRGEILVDGKDIAKLSAAELRELRRKKISMVFQSFALLP 119 (386)
T ss_pred EeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCC--CCCceEEECCcchhcCCHHHHHHHHhhhhhhhhhhhcccc
Confidence 46899999999999999999999999999999999877 458999999998642 123567899999999999
Q ss_pred CCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCC
Q 000808 777 FVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEP 856 (1275)
Q Consensus 777 ~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~~l~~~p~illlDEP 856 (1275)
+.||.||..|+..++ ..+++++++++.++++.+||....+.++ .+||||+||||.+||||+.+|+||++|||
T Consensus 120 hrtVl~Nv~fGLev~---Gv~~~er~~~a~~~l~~VgL~~~~~~yp-----~eLSGGMqQRVGLARAla~~~~IlLMDEa 191 (386)
T COG4175 120 HRTVLENVAFGLEVQ---GVPKAEREERALEALELVGLEGYADKYP-----NELSGGMQQRVGLARALANDPDILLMDEA 191 (386)
T ss_pred chhHhhhhhcceeec---CCCHHHHHHHHHHHHHHcCchhhhhcCc-----ccccchHHHHHHHHHHHccCCCEEEecCc
Confidence 999999999998776 5678899999999999999999999886 57999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhhhhheeecCcEEEEECCCCc
Q 000808 857 TSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVGPLGR 917 (1275)
Q Consensus 857 tsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~~~ 917 (1275)
+|+|||--+.++++.|.++.++ ++|||++|||++ |.+.+-|||.+|+ +|+++..|.+++
T Consensus 192 FSALDPLIR~~mQdeLl~Lq~~l~KTIvFitHDLd-EAlriG~rIaimk-dG~ivQ~Gtp~e 251 (386)
T COG4175 192 FSALDPLIRTEMQDELLELQAKLKKTIVFITHDLD-EALRIGDRIAIMK-DGEIVQVGTPEE 251 (386)
T ss_pred hhhcChHHHHHHHHHHHHHHHHhCCeEEEEecCHH-HHHhccceEEEec-CCeEEEeCCHHH
Confidence 9999999999999999988655 899999999997 7889999999998 589999999853
No 180
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=1.4e-35 Score=333.04 Aligned_cols=220 Identities=27% Similarity=0.358 Sum_probs=181.1
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCc-eEEEEEEEcCcc
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YITGNITISGYP 755 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~-~~~G~i~~~g~~ 755 (1275)
-++++|+++++. ++.+|+|+|+++++||+++|+||||||||||+++|+|..++. ..+|+|.++|.+
T Consensus 4 ~l~~~nl~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~ 70 (262)
T PRK09984 4 IIRVEKLAKTFN-------------QHQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRT 70 (262)
T ss_pred EEEEeeEEEEeC-------------CeEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEe
Confidence 478999988763 246999999999999999999999999999999999976532 236999999987
Q ss_pred CCc--------ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCC-----CCCHHHHHHHHHHHHHHcCCCccccccc
Q 000808 756 KKQ--------ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPP-----EVDSETQKMFIEEIMELVELNPLRQSLV 822 (1275)
Q Consensus 756 ~~~--------~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~-----~~~~~~~~~~~~~~l~~l~l~~~~~~~~ 822 (1275)
... ...++.++|++|++.+++.+|++||+.+......+. ....++.+++++++++.+|+.+..+..+
T Consensus 71 ~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~ 150 (262)
T PRK09984 71 VQREGRLARDIRKSRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMVHFAHQRV 150 (262)
T ss_pred cccccccchhHHHHHhheEEEccccccccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHcCCHHHHhCCc
Confidence 532 123456899999999999999999998753211000 1112334557889999999987777765
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhhhhh
Q 000808 823 GLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDELF 901 (1275)
Q Consensus 823 ~~~~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~ 901 (1275)
..||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ .+...+|+++
T Consensus 151 -----~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~-~~~~~~d~i~ 224 (262)
T PRK09984 151 -----STLSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVD-YALRYCERIV 224 (262)
T ss_pred -----cccCHHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEE
Confidence 469999999999999999999999999999999999999999999998754 899999999986 4678899999
Q ss_pred eeecCcEEEEECCCC
Q 000808 902 LMKRGGQEIYVGPLG 916 (1275)
Q Consensus 902 ~l~~gg~~~~~g~~~ 916 (1275)
+|.+ |++++.|+++
T Consensus 225 ~l~~-g~i~~~g~~~ 238 (262)
T PRK09984 225 ALRQ-GHVFYDGSSQ 238 (262)
T ss_pred EEEC-CEEEEeCCHH
Confidence 9986 7899999874
No 181
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-35 Score=330.25 Aligned_cols=221 Identities=24% Similarity=0.325 Sum_probs=176.9
Q ss_pred CcEEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCC---CceEEEEEEE
Q 000808 675 PHSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT---GGYITGNITI 751 (1275)
Q Consensus 675 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~---~~~~~G~i~~ 751 (1275)
|..++++|+++++. ++.+|+|+|+++++||+++|+||||||||||+++|+|... ..+.+|+|.+
T Consensus 4 ~~~l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~ 70 (253)
T PRK14242 4 PPKMEARGLSFFYG-------------DFQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILL 70 (253)
T ss_pred CcEEEEeeeEEEEC-------------CeeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEE
Confidence 34689999998873 2359999999999999999999999999999999999642 1135799999
Q ss_pred cCccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCC
Q 000808 752 SGYPKKQ-----ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPG 826 (1275)
Q Consensus 752 ~g~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~ 826 (1275)
+|.+... ...++.++|++|++.+++ .|++||+.+....+. ....+..+++++++++.+++.+....... ..
T Consensus 71 ~g~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~ 146 (253)
T PRK14242 71 DGENIYDPHVDVVELRRRVGMVFQKPNPFP-KSIFENVAYGLRVNG--VKDKAYLAERVERSLRHAALWDEVKDRLH-ES 146 (253)
T ss_pred CCEEccccccCHHHHhhcEEEEecCCCCCc-CcHHHHHHHHHHHcC--CCCHHHHHHHHHHHHHHcCCchhhhHHhh-CC
Confidence 9987642 123567999999988887 599999988754321 11223345567889999998542111111 11
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecC
Q 000808 827 ESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRG 906 (1275)
Q Consensus 827 ~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~g 906 (1275)
.+.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|+++ ++.+.+|++++|++
T Consensus 147 ~~~LSgGq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tvii~tH~~~-~~~~~~d~v~~l~~- 223 (253)
T PRK14242 147 ALGLSGGQQQRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELKA-RYTIIIVTHNMQ-QAARVSDVTAFFYM- 223 (253)
T ss_pred cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCeEEEEEecHH-HHHHhCCEEEEEEC-
Confidence 357999999999999999999999999999999999999999999999854 799999999985 56688999999986
Q ss_pred cEEEEECCC
Q 000808 907 GQEIYVGPL 915 (1275)
Q Consensus 907 g~~~~~g~~ 915 (1275)
|+++..|++
T Consensus 224 G~i~~~g~~ 232 (253)
T PRK14242 224 GKLIEVGPT 232 (253)
T ss_pred CEEEEeCCH
Confidence 789988875
No 182
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-35 Score=330.66 Aligned_cols=217 Identities=19% Similarity=0.257 Sum_probs=178.3
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCc---eEEEEEEEcC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITISG 753 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~---~~~G~i~~~g 753 (1275)
.++++|++++++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..++. +.+|+|.++|
T Consensus 4 ~l~i~~v~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g 70 (258)
T PRK14241 4 RIDVKDLNIYYG-------------SFHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDG 70 (258)
T ss_pred cEEEeeEEEEEC-------------CEeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECC
Confidence 478899998873 235999999999999999999999999999999999976421 2589999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCc----cccccccC
Q 000808 754 YPKKQ-----ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNP----LRQSLVGL 824 (1275)
Q Consensus 754 ~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~----~~~~~~~~ 824 (1275)
.++.. ...++.++|++|++.+++.+||+||+.+....+. ....+..+++++++++.+|+.+ ..+..+
T Consensus 71 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~-- 146 (258)
T PRK14241 71 EDLYGPGVDPVAVRRTIGMVFQRPNPFPTMSIRDNVVAGLKLNG--VRNKKDLDELVEKSLRGANLWNEVKDRLDKPG-- 146 (258)
T ss_pred EeccccccChHHHhcceEEEccccccCCCCcHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhhhHhhCCc--
Confidence 87531 2345679999999999999999999987654321 1123344566788999999842 333333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheee
Q 000808 825 PGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMK 904 (1275)
Q Consensus 825 ~~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~ 904 (1275)
..||||||||++|||||+.+|++++|||||+|||+.++..+.+.|+++++ ++|||+++|+++ ++.+.+|++++|+
T Consensus 147 ---~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tviivsH~~~-~~~~~~d~i~~l~ 221 (258)
T PRK14241 147 ---GGLSGGQQQRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQ-DYTIVIVTHNMQ-QAARVSDQTAFFN 221 (258)
T ss_pred ---ccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEecCHH-HHHHhCCEEEEEe
Confidence 57999999999999999999999999999999999999999999999864 689999999975 5678899999997
Q ss_pred -----cCcEEEEECCC
Q 000808 905 -----RGGQEIYVGPL 915 (1275)
Q Consensus 905 -----~gg~~~~~g~~ 915 (1275)
+.|++++.|++
T Consensus 222 ~~~~~~~g~i~~~~~~ 237 (258)
T PRK14241 222 LEATGKPGRLVEIDDT 237 (258)
T ss_pred cccCCCCceEEecCCH
Confidence 24899999986
No 183
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=3.3e-36 Score=341.14 Aligned_cols=213 Identities=27% Similarity=0.438 Sum_probs=177.4
Q ss_pred CcEEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCc
Q 000808 675 PHSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGY 754 (1275)
Q Consensus 675 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~ 754 (1275)
+..++|+|+++++. ++++||+++||+|++||.+||+|+|||||||++|+|.+..+ .+|+|.|||+
T Consensus 349 ~~~I~F~dV~f~y~------------~k~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~LlrF~d---~sG~I~IdG~ 413 (591)
T KOG0057|consen 349 GGSIEFDDVHFSYG------------PKRKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLLRFFD---YSGSILIDGQ 413 (591)
T ss_pred CCcEEEEeeEEEeC------------CCCceecceeEEecCCCEEEEECCCCCCHHHHHHHHHHHhc---cCCcEEECCe
Confidence 45699999999985 23469999999999999999999999999999999998664 3799999999
Q ss_pred cCCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCc-------cccccccC
Q 000808 755 PKKQ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNP-------LRQSLVGL 824 (1275)
Q Consensus 755 ~~~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~-------~~~~~~~~ 824 (1275)
+++. +..|+.+||||||..+|. -|+.+|+.|+. ...+.+ +|-++.+..|+.+ -.+|.+|.
T Consensus 414 dik~~~~~SlR~~Ig~VPQd~~LFn-dTIl~NI~YGn-----~sas~e----eV~e~~k~a~~hd~i~~l~~GY~T~VGe 483 (591)
T KOG0057|consen 414 DIKEVSLESLRQSIGVVPQDSVLFN-DTILYNIKYGN-----PSASDE----EVVEACKRAGLHDVISRLPDGYQTLVGE 483 (591)
T ss_pred eHhhhChHHhhhheeEeCCcccccc-hhHHHHhhcCC-----CCcCHH----HHHHHHHHcCcHHHHHhccccchhhHhh
Confidence 8754 567889999999988875 59999998863 233333 3455566666543 33455665
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheee
Q 000808 825 PGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMK 904 (1275)
Q Consensus 825 ~~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~ 904 (1275)
.+ ..|||||||||+||||++.+|+|+++|||||.||.++...+++.+++. ..|+|+|++.|+. +..+.||+|++|+
T Consensus 484 rG-~~LSGGekQrvslaRa~lKda~Il~~DEaTS~LD~~TE~~i~~~i~~~-~~~rTvI~IvH~l--~ll~~~DkI~~l~ 559 (591)
T KOG0057|consen 484 RG-LMLSGGEKQRVSLARAFLKDAPILLLDEATSALDSETEREILDMIMDV-MSGRTVIMIVHRL--DLLKDFDKIIVLD 559 (591)
T ss_pred cc-cccccchHHHHHHHHHHhcCCCeEEecCcccccchhhHHHHHHHHHHh-cCCCeEEEEEecc--hhHhcCCEEEEEE
Confidence 43 469999999999999999999999999999999999999999999984 3589999999996 4788999999999
Q ss_pred cCcEEEEECCCCc
Q 000808 905 RGGQEIYVGPLGR 917 (1275)
Q Consensus 905 ~gg~~~~~g~~~~ 917 (1275)
+ |++...|+.++
T Consensus 560 n-G~v~e~gth~e 571 (591)
T KOG0057|consen 560 N-GTVKEYGTHSE 571 (591)
T ss_pred C-CeeEEeccHHH
Confidence 7 78999998743
No 184
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=1.4e-36 Score=325.83 Aligned_cols=195 Identities=31% Similarity=0.431 Sum_probs=162.9
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCccc---cceEEEeccccccCCCCCHHHHHHHHHhccCC
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFVP---QRTAAYISQHDVHIGEMTVRETLAFSARCQGV 77 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~~~---~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~ 77 (1275)
+++|+|||||||||||++|+|.++|. +|+|.++|+++.+... .+.++||||.+.....+||+|-+.++..=+
T Consensus 30 i~~iiGpNG~GKSTLLk~l~g~l~p~---~G~V~l~g~~i~~~~~kelAk~ia~vpQ~~~~~~~~tV~d~V~~GR~p~-- 104 (258)
T COG1120 30 ITGILGPNGSGKSTLLKCLAGLLKPK---SGEVLLDGKDIASLSPKELAKKLAYVPQSPSAPFGLTVYELVLLGRYPH-- 104 (258)
T ss_pred EEEEECCCCCCHHHHHHHHhccCCCC---CCEEEECCCchhhcCHHHHhhhEEEeccCCCCCCCcEEeehHhhcCCcc--
Confidence 58999999999999999999999987 9999999999876543 378999999988888999999999863210
Q ss_pred CCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhhHHH
Q 000808 78 GSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGE 157 (1275)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~ 157 (1275)
. ...... .++.+..++..|+.+|+.+.++.. +..|||||||||.|||
T Consensus 105 -~--~~~~~~-------------------------~~~D~~~v~~aL~~~~~~~la~r~-----~~~LSGGerQrv~iAr 151 (258)
T COG1120 105 -L--GLFGRP-------------------------SKEDEEIVEEALELLGLEHLADRP-----VDELSGGERQRVLIAR 151 (258)
T ss_pred -c--ccccCC-------------------------CHhHHHHHHHHHHHhCcHHHhcCc-----ccccChhHHHHHHHHH
Confidence 0 000000 111222467789999998877644 5579999999999999
Q ss_pred HHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhhHH
Q 000808 158 MMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVL 234 (1275)
Q Consensus 158 al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~~~ 234 (1275)
||+.+|+||+||||||+||...+.++++.++++.+.. +.+++.+.|+.+.+..+||++++|++|+++.+|++++++
T Consensus 152 ALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~-~~tvv~vlHDlN~A~ryad~~i~lk~G~i~a~G~p~evl 227 (258)
T COG1120 152 ALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREK-GLTVVMVLHDLNLAARYADHLILLKDGKIVAQGTPEEVL 227 (258)
T ss_pred HHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhc-CCEEEEEecCHHHHHHhCCEEEEEECCeEEeecCcchhc
Confidence 9999999999999999999999999999999998654 566666899999999999999999999999999998775
No 185
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=1.8e-35 Score=332.31 Aligned_cols=224 Identities=25% Similarity=0.301 Sum_probs=179.3
Q ss_pred EEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCC
Q 000808 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1275)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 757 (1275)
++++|+++.++...... ..+++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~~~~~~~----~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~ 76 (265)
T TIGR02769 3 LEVRDVTHTYRTGGLFG----AKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEK--PAQGTVSFRGQDLY 76 (265)
T ss_pred EEEEeEEEEeccCcccc----ccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEcc
Confidence 67889988874110000 0113569999999999999999999999999999999999865 35899999998764
Q ss_pred cc------cccceEEEeccCC--CCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCC-ccccccccCCCCC
Q 000808 758 QE------TFTRISGYCEQND--IHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELN-PLRQSLVGLPGES 828 (1275)
Q Consensus 758 ~~------~~~~~~~~v~q~~--~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~~~ 828 (1275)
.. ..++.++|++|++ .+.+.+|++|++.+...... .......+++++++++.+|+. +..+..+ .
T Consensus 77 ~~~~~~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~~~-----~ 149 (265)
T TIGR02769 77 QLDRKQRRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHLT--SLDESEQKARIAELLDMVGLRSEDADKLP-----R 149 (265)
T ss_pred ccCHHHHHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCChhhhhCCh-----h
Confidence 21 1345799999996 46678999999976543111 122334456688999999996 5556554 4
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhhhhheeecCc
Q 000808 829 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDELFLMKRGG 907 (1275)
Q Consensus 829 ~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg 907 (1275)
.||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|++. .+.+.+|++++|++ |
T Consensus 150 ~LSgGe~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~-~~~~~~d~i~~l~~-G 227 (265)
T TIGR02769 150 QLSGGQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLR-LVQSFCQRVAVMDK-G 227 (265)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHHhcEEEEEeC-C
Confidence 79999999999999999999999999999999999999999999998765 899999999975 46678999999985 7
Q ss_pred EEEEECCCC
Q 000808 908 QEIYVGPLG 916 (1275)
Q Consensus 908 ~~~~~g~~~ 916 (1275)
++++.|+.+
T Consensus 228 ~i~~~g~~~ 236 (265)
T TIGR02769 228 QIVEECDVA 236 (265)
T ss_pred EEEEECCHH
Confidence 999999863
No 186
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=1.2e-35 Score=327.45 Aligned_cols=212 Identities=26% Similarity=0.322 Sum_probs=174.1
Q ss_pred EEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCC
Q 000808 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1275)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 757 (1275)
++++|+++.++ ++++|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 1 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 65 (230)
T TIGR03410 1 LEVSNLNVYYG-------------QSHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLP--VKSGSIRLDGEDIT 65 (230)
T ss_pred CEEEeEEEEeC-------------CeEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEECC
Confidence 35788887763 2469999999999999999999999999999999999865 34799999998754
Q ss_pred cc----cccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcC-CCccccccccCCCCCCCCH
Q 000808 758 QE----TFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVE-LNPLRQSLVGLPGESGLST 832 (1275)
Q Consensus 758 ~~----~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~-l~~~~~~~~~~~~~~~lSg 832 (1275)
.. ..++.++|++|++.+++.+|+.||+.+....+. .. ..+..+++++.++ +.+..++.+ +.|||
T Consensus 66 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~---~~---~~~~~~~~l~~~~~l~~~~~~~~-----~~LS~ 134 (230)
T TIGR03410 66 KLPPHERARAGIAYVPQGREIFPRLTVEENLLTGLAALP---RR---SRKIPDEIYELFPVLKEMLGRRG-----GDLSG 134 (230)
T ss_pred CCCHHHHHHhCeEEeccCCcccCCCcHHHHHHHHHHhcC---cc---hHHHHHHHHHHHHhHHHHhhCCh-----hhCCH
Confidence 21 124568999999999999999999987654321 11 1233566777776 455555554 47999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhhhhheeecCcEEEE
Q 000808 833 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDELFLMKRGGQEIY 911 (1275)
Q Consensus 833 Gerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~ 911 (1275)
|||||++|||+|+.+|++++|||||+|||+.++..+.+.|++++++ |+|||++||+++ ++...+|++++|.+ |+++.
T Consensus 135 G~~qrv~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v~~l~~-g~i~~ 212 (230)
T TIGR03410 135 GQQQQLAIARALVTRPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLD-FARELADRYYVMER-GRVVA 212 (230)
T ss_pred HHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999998764 899999999975 56678999999986 78999
Q ss_pred ECCCCc
Q 000808 912 VGPLGR 917 (1275)
Q Consensus 912 ~g~~~~ 917 (1275)
.|+.++
T Consensus 213 ~~~~~~ 218 (230)
T TIGR03410 213 SGAGDE 218 (230)
T ss_pred ECCHHH
Confidence 998753
No 187
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=1.9e-35 Score=321.50 Aligned_cols=209 Identities=24% Similarity=0.301 Sum_probs=174.0
Q ss_pred EEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCCc
Q 000808 679 TFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 758 (1275)
Q Consensus 679 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 758 (1275)
+++|+++.++ .+++|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~---------------~~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~ 64 (213)
T TIGR01277 2 ALDKVRYEYE---------------HLPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIE--PASGSIKVNDQSHTG 64 (213)
T ss_pred eEEeeeEEeC---------------CcceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEEccc
Confidence 5778877663 14679999999999999999999999999999999876 348999999987643
Q ss_pred -ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHH
Q 000808 759 -ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKR 837 (1275)
Q Consensus 759 -~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqr 837 (1275)
...++.++|++|++.+++.+|+.||+.+...... . .....+++++++++.+|+.+..++.+ +.||||||||
T Consensus 65 ~~~~~~~i~~v~q~~~~~~~~t~~en~~~~~~~~~--~-~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qr 136 (213)
T TIGR01277 65 LAPYQRPVSMLFQENNLFAHLTVRQNIGLGLHPGL--K-LNAEQQEKVVDAAQQVGIADYLDRLP-----EQLSGGQRQR 136 (213)
T ss_pred CChhccceEEEeccCccCCCCcHHHHHHhHhhccC--C-ccHHHHHHHHHHHHHcCcHHHhhCCc-----ccCCHHHHHH
Confidence 2345679999999999999999999986543211 1 11223456788999999987777765 4799999999
Q ss_pred HHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhhhhheeecCcEEEEECC
Q 000808 838 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVGP 914 (1275)
Q Consensus 838 v~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~ 914 (1275)
++|||+|+.+|++++|||||+|||+.++..+.+.|+++.++ |+|||+++|+++ ++.+.+|++++|.+ |+++..|.
T Consensus 137 l~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~tii~vsh~~~-~~~~~~d~v~~l~~-g~i~~~~~ 212 (213)
T TIGR01277 137 VALARCLVRPNPILLLDEPFSALDPLLREEMLALVKQLCSERQRTLLMVTHHLS-DARAIASQIAVVSQ-GKIKVVSD 212 (213)
T ss_pred HHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHhhcCeEEEEEC-CeEEEecC
Confidence 99999999999999999999999999999999999998764 899999999975 46678999999985 78888774
No 188
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-35 Score=333.00 Aligned_cols=218 Identities=27% Similarity=0.369 Sum_probs=180.5
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 756 (1275)
.++++|+++.+. ++.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 11 ~l~i~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~ 75 (265)
T PRK10575 11 TFALRNVSFRVP-------------GRTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQP--PSEGEILLDAQPL 75 (265)
T ss_pred eEEEeeEEEEEC-------------CEEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCCEEEECCEeh
Confidence 588999998773 2469999999999999999999999999999999999865 3479999999875
Q ss_pred Cc---ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCC-CCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCH
Q 000808 757 KQ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLP-PEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLST 832 (1275)
Q Consensus 757 ~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~-~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSg 832 (1275)
.. ..+++.++|++|+..+++.+|+.||+.+....... ........+++++++++.+++.+..++.+ ..|||
T Consensus 76 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 150 (265)
T PRK10575 76 ESWSSKAFARKVAYLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAHRLV-----DSLSG 150 (265)
T ss_pred hhCCHHHHhhheEEeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCCc-----ccCCH
Confidence 32 23355789999998888889999999875321100 01111233456789999999987767665 46999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhhhhheeecCcEEEE
Q 000808 833 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDELFLMKRGGQEIY 911 (1275)
Q Consensus 833 Gerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~ 911 (1275)
|||||++|||+|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|.+ |+++.
T Consensus 151 G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~-~i~~~~d~i~~l~~-G~i~~ 228 (265)
T PRK10575 151 GERQRAWIAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDIN-MAARYCDYLVALRG-GEMIA 228 (265)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEE
Confidence 9999999999999999999999999999999999999999998765 899999999986 56788999999985 78999
Q ss_pred ECCCC
Q 000808 912 VGPLG 916 (1275)
Q Consensus 912 ~g~~~ 916 (1275)
.|+.+
T Consensus 229 ~~~~~ 233 (265)
T PRK10575 229 QGTPA 233 (265)
T ss_pred ecCHH
Confidence 98864
No 189
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-35 Score=335.00 Aligned_cols=218 Identities=23% Similarity=0.328 Sum_probs=177.1
Q ss_pred EEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCC
Q 000808 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1275)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 757 (1275)
++++|++++++... ...+++|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~~~~--------~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~i~ 72 (280)
T PRK13649 3 INLQNVSYTYQAGT--------PFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHV--PTQGSVRVDDTLIT 72 (280)
T ss_pred EEEEEEEEEcCCCC--------ccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcc
Confidence 67899988874110 011359999999999999999999999999999999999865 35899999998754
Q ss_pred c-------ccccceEEEeccCC--CCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCc-cccccccCCCC
Q 000808 758 Q-------ETFTRISGYCEQND--IHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNP-LRQSLVGLPGE 827 (1275)
Q Consensus 758 ~-------~~~~~~~~~v~q~~--~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~-~~~~~~~~~~~ 827 (1275)
. ...++.++|++|++ .+++ .|++||+.+..... ..+.++.+++++++++.+||.+ ..+..+
T Consensus 73 ~~~~~~~~~~~~~~i~~~~q~~~~~~~~-~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~----- 143 (280)
T PRK13649 73 STSKNKDIKQIRKKVGLVFQFPESQLFE-ETVLKDVAFGPQNF---GVSQEEAEALAREKLALVGISESLFEKNP----- 143 (280)
T ss_pred ccccccCHHHHHhheEEEeeChhhhhcc-ccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCChhhhhCCc-----
Confidence 2 12356789999996 3444 69999998764322 1233444556788999999973 445554
Q ss_pred CCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCc
Q 000808 828 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGG 907 (1275)
Q Consensus 828 ~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg 907 (1275)
+.||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|++++++|+|||++||+++ ++.+.+|++++|++ |
T Consensus 144 ~~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~-~~~~~~d~i~~l~~-G 221 (280)
T PRK13649 144 FELSGGQMRRVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMD-DVANYADFVYVLEK-G 221 (280)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHH-HHHHhCCEEEEEEC-C
Confidence 479999999999999999999999999999999999999999999998777899999999975 56678999999985 7
Q ss_pred EEEEECCCC
Q 000808 908 QEIYVGPLG 916 (1275)
Q Consensus 908 ~~~~~g~~~ 916 (1275)
+++..|+++
T Consensus 222 ~i~~~g~~~ 230 (280)
T PRK13649 222 KLVLSGKPK 230 (280)
T ss_pred EEEEeCCHH
Confidence 899888763
No 190
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.9e-35 Score=337.64 Aligned_cols=226 Identities=23% Similarity=0.249 Sum_probs=183.7
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 756 (1275)
-++++|+++.+....... ...+.+.+|+|||++|++||++||+|+||||||||+++|+|...+ .+|+|.++|.++
T Consensus 5 ~l~v~nl~~~~~~~~~~~---~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p--~~G~i~~~g~~l 79 (327)
T PRK11308 5 LLQAIDLKKHYPVKRGLF---KPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETP--TGGELYYQGQDL 79 (327)
T ss_pred eEEEeeeEEEEcCCCCcc---ccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCC--CCcEEEECCEEc
Confidence 588999998875211000 001134699999999999999999999999999999999998653 479999999876
Q ss_pred Ccc------cccceEEEeccCC--CCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCc-cccccccCCCC
Q 000808 757 KQE------TFTRISGYCEQND--IHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNP-LRQSLVGLPGE 827 (1275)
Q Consensus 757 ~~~------~~~~~~~~v~q~~--~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~-~~~~~~~~~~~ 827 (1275)
... .+++.++|++|++ .+.|.+|+.+++........ .....+.++++.++++.+||.+ ..++.+
T Consensus 80 ~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gL~~~~~~~~p----- 152 (327)
T PRK11308 80 LKADPEAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLINT--SLSAAERREKALAMMAKVGLRPEHYDRYP----- 152 (327)
T ss_pred CcCCHHHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHcc--CCCHHHHHHHHHHHHHHCCCChHHhcCCC-----
Confidence 431 2456799999997 57889999999976544321 2344556677899999999963 445554
Q ss_pred CCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhhhhheeecC
Q 000808 828 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDELFLMKRG 906 (1275)
Q Consensus 828 ~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~g 906 (1275)
.+||||||||++|||||+.+|++|++||||++||..++..+++.|+++.++ |.|||++|||++ .+...+|++++|.+
T Consensus 153 ~~LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~-~~~~~adrv~vm~~- 230 (327)
T PRK11308 153 HMFSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLS-VVEHIADEVMVMYL- 230 (327)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-
Confidence 579999999999999999999999999999999999999999999998764 899999999975 45678999999986
Q ss_pred cEEEEECCCC
Q 000808 907 GQEIYVGPLG 916 (1275)
Q Consensus 907 g~~~~~g~~~ 916 (1275)
|+++..|+.+
T Consensus 231 G~ive~g~~~ 240 (327)
T PRK11308 231 GRCVEKGTKE 240 (327)
T ss_pred CEEEEECCHH
Confidence 7999999864
No 191
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.1e-35 Score=317.49 Aligned_cols=196 Identities=30% Similarity=0.570 Sum_probs=162.7
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCc-eEEEEEEEcCcc
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YITGNITISGYP 755 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~-~~~G~i~~~g~~ 755 (1275)
.++|+|++|.++.+ .+++.+|+|+|+++++||+++|+||||||||||+++|+|..++. +.+|+|.++|.+
T Consensus 3 ~~~~~~~~~~~~~~---------~~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~G~i~i~g~~ 73 (202)
T cd03233 3 TLSWRNISFTTGKG---------RSKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSVEGDIHYNGIP 73 (202)
T ss_pred eEEEEccEEEeccC---------CCCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHHhcccCCCCCCcceEEEECCEE
Confidence 58899999998632 13457999999999999999999999999999999999976522 458999999987
Q ss_pred CCc--ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHH
Q 000808 756 KKQ--ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTE 833 (1275)
Q Consensus 756 ~~~--~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgG 833 (1275)
... ...++.++|++|++.+++.+||+||+.+..... .+.. ...||||
T Consensus 74 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~--------------------------~~~~-----~~~LS~G 122 (202)
T cd03233 74 YKEFAEKYPGEIIYVSEEDVHFPTLTVRETLDFALRCK--------------------------GNEF-----VRGISGG 122 (202)
T ss_pred CccchhhhcceEEEEecccccCCCCcHHHHHhhhhhhc--------------------------cccc-----hhhCCHH
Confidence 643 234567999999999999999999997653211 1222 2469999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhhhhheeecCcEEEEE
Q 000808 834 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYV 912 (1275)
Q Consensus 834 erqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~ 912 (1275)
||||++|||||+.+|++++|||||+|||+.++..+.+.|+++.++ ++|+|+++|+...++.+.+|++++|++ |++++.
T Consensus 123 e~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~l~~-G~i~~~ 201 (202)
T cd03233 123 ERKRVSIAEALVSRASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLVLYE-GRQIYY 201 (202)
T ss_pred HHHHHHHHHHHhhCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEEEEC-CEEEec
Confidence 999999999999999999999999999999999999999998765 677777766644467789999999996 788776
Q ss_pred C
Q 000808 913 G 913 (1275)
Q Consensus 913 g 913 (1275)
|
T Consensus 202 g 202 (202)
T cd03233 202 G 202 (202)
T ss_pred C
Confidence 4
No 192
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-35 Score=332.35 Aligned_cols=215 Identities=28% Similarity=0.354 Sum_probs=179.0
Q ss_pred EEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCC
Q 000808 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1275)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 757 (1275)
++++|+++.+. +++.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~~ 67 (275)
T PRK13639 2 LETRDLKYSYP------------DGTEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILK--PTSGEVLIKGEPIK 67 (275)
T ss_pred EEEEEEEEEeC------------CCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCccEEEECCEECc
Confidence 56888888763 12359999999999999999999999999999999999865 34799999998763
Q ss_pred c-----ccccceEEEeccCCC-CCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCC
Q 000808 758 Q-----ETFTRISGYCEQNDI-HSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLS 831 (1275)
Q Consensus 758 ~-----~~~~~~~~~v~q~~~-~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lS 831 (1275)
. ...++.++|++|++. .+...||.||+.+..... ....++..+++.++++.++|.+..++.+ +.||
T Consensus 68 ~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~LS 139 (275)
T PRK13639 68 YDKKSLLEVRKTVGIVFQNPDDQLFAPTVEEDVAFGPLNL---GLSKEEVEKRVKEALKAVGMEGFENKPP-----HHLS 139 (275)
T ss_pred cccchHHHHHhheEEEeeChhhhhccccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHCCCchhhcCCh-----hhCC
Confidence 1 123567999999963 333479999998754321 2234445567889999999988877765 4699
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcEEEE
Q 000808 832 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQEIY 911 (1275)
Q Consensus 832 gGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~ 911 (1275)
||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++.++|+|||+++|+++ .+.+.+|++++|++ |+++.
T Consensus 140 ~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~-~~~~~~d~i~~l~~-G~i~~ 217 (275)
T PRK13639 140 GGQKKRVAIAGILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVD-LVPVYADKVYVMSD-GKIIK 217 (275)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 99999999999999999999999999999999999999999998777999999999975 56678999999986 79999
Q ss_pred ECCCC
Q 000808 912 VGPLG 916 (1275)
Q Consensus 912 ~g~~~ 916 (1275)
.|+++
T Consensus 218 ~g~~~ 222 (275)
T PRK13639 218 EGTPK 222 (275)
T ss_pred eCCHH
Confidence 99863
No 193
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-35 Score=333.44 Aligned_cols=219 Identities=22% Similarity=0.286 Sum_probs=181.7
Q ss_pred cEEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCcc
Q 000808 676 HSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 755 (1275)
Q Consensus 676 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~ 755 (1275)
..++++|++++++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+
T Consensus 6 ~~l~i~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~ 70 (265)
T PRK10253 6 ARLRGEQLTLGYG-------------KYTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMT--PAHGHVWLDGEH 70 (265)
T ss_pred cEEEEEEEEEEEC-------------CEEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCcEEEECCEE
Confidence 4688999998874 2359999999999999999999999999999999999865 347999999987
Q ss_pred CCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCC-CCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCC
Q 000808 756 KKQ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLP-PEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLS 831 (1275)
Q Consensus 756 ~~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~-~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lS 831 (1275)
... ...++.++|++|++.+++.+|++|++.+......+ .....+..+++++++++.+|+.+..++.+ ..||
T Consensus 71 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 145 (265)
T PRK10253 71 IQHYASKEVARRIGLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQATGITHLADQSV-----DTLS 145 (265)
T ss_pred hhhCCHHHHhhheEEeeccCcCCCCCcHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCCc-----ccCC
Confidence 532 22345689999999988889999999765211100 00111233456789999999987777665 4799
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhhhhheeecCcEEE
Q 000808 832 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDELFLMKRGGQEI 910 (1275)
Q Consensus 832 gGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~ 910 (1275)
||||||++|||||+.+|++++|||||+|||+.++..+.+.|+++.++ |+|||+++|++. ++.+.+|++++|.+ |+++
T Consensus 146 ~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~-~~~~~~d~i~~l~~-G~i~ 223 (265)
T PRK10253 146 GGQRQRAWIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLN-QACRYASHLIALRE-GKIV 223 (265)
T ss_pred hHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999998764 899999999986 57789999999985 7899
Q ss_pred EECCCC
Q 000808 911 YVGPLG 916 (1275)
Q Consensus 911 ~~g~~~ 916 (1275)
..|+++
T Consensus 224 ~~g~~~ 229 (265)
T PRK10253 224 AQGAPK 229 (265)
T ss_pred EeCCHH
Confidence 999874
No 194
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-35 Score=330.26 Aligned_cols=218 Identities=21% Similarity=0.271 Sum_probs=178.5
Q ss_pred CCcEEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCC--C-ceEEEEEE
Q 000808 674 EPHSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYITGNIT 750 (1275)
Q Consensus 674 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~--~-~~~~G~i~ 750 (1275)
.+..++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|... + .+.+|+|.
T Consensus 10 ~~~~l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~ 76 (260)
T PRK10744 10 APSKIQVRNLNFYYG-------------KFHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEIL 76 (260)
T ss_pred CCceEEEEEEEEEeC-------------CeEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEE
Confidence 345789999998873 2359999999999999999999999999999999999753 1 13579999
Q ss_pred EcCccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCc----ccccc
Q 000808 751 ISGYPKKQ-----ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNP----LRQSL 821 (1275)
Q Consensus 751 ~~g~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~----~~~~~ 821 (1275)
++|.+... ...++.++|++|++.+++ .|++||+.+...... ..+.++.+++++++++.+++.+ ..+..
T Consensus 77 ~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~ 153 (260)
T PRK10744 77 LDGENILTPKQDIALLRAKVGMVFQKPTPFP-MSIYDNIAFGVRLFE--KLSRAEMDERVEWALTKAALWNEVKDKLHQS 153 (260)
T ss_pred ECCEEccccccchHHHhcceEEEecCCccCc-CcHHHHHhhhHhhcC--CCCHHHHHHHHHHHHHHcCCChhhHHHHhcC
Confidence 99987632 134567999999988887 899999987653221 1233444567889999999843 23333
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhh
Q 000808 822 VGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELF 901 (1275)
Q Consensus 822 ~~~~~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~ 901 (1275)
...||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||++||+++ ++.+.+|+++
T Consensus 154 -----~~~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tiii~sH~~~-~~~~~~d~i~ 226 (260)
T PRK10744 154 -----GYSLSGGQQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQ-DYTVVIVTHNMQ-QAARCSDYTA 226 (260)
T ss_pred -----CCCCCHHHHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEeCCHH-HHHHhCCEEE
Confidence 257999999999999999999999999999999999999999999999854 789999999975 4667899999
Q ss_pred eeecCcEEEEECCC
Q 000808 902 LMKRGGQEIYVGPL 915 (1275)
Q Consensus 902 ~l~~gg~~~~~g~~ 915 (1275)
+|++ |+++..|+.
T Consensus 227 ~l~~-G~i~~~g~~ 239 (260)
T PRK10744 227 FMYL-GELIEFGNT 239 (260)
T ss_pred EEEC-CEEEEeCCH
Confidence 9986 799999876
No 195
>cd03232 ABC_PDR_domain2 The pleiotropic drug resistance-like (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.9e-35 Score=315.42 Aligned_cols=190 Identities=58% Similarity=0.943 Sum_probs=161.1
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 756 (1275)
.++++|+++.++.. ..++++|+|+|+++++||+++|+||||||||||+++|+|.....+.+|+|.++|.+.
T Consensus 3 ~l~~~~l~~~~~~~---------~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~G~i~~~g~~~ 73 (192)
T cd03232 3 VLTWKNLNYTVPVK---------GGKRQLLNNISGYVKPGTLTALMGESGAGKTTLLDVLAGRKTAGVITGEILINGRPL 73 (192)
T ss_pred EEEEeeeEEEecCC---------CCceEeEEccEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCcCCCcceEEEECCEeh
Confidence 47899999887411 012469999999999999999999999999999999999643224589999999876
Q ss_pred CcccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHH
Q 000808 757 KQETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRK 836 (1275)
Q Consensus 757 ~~~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerq 836 (1275)
. ..+++.++|++|++.+++.+|++||+.+...+ + .|||||||
T Consensus 74 ~-~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~-------------------~------------------~LSgGe~q 115 (192)
T cd03232 74 D-KNFQRSTGYVEQQDVHSPNLTVREALRFSALL-------------------R------------------GLSVEQRK 115 (192)
T ss_pred H-HHhhhceEEecccCccccCCcHHHHHHHHHHH-------------------h------------------cCCHHHhH
Confidence 4 33456789999999899999999999864210 0 49999999
Q ss_pred HHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcEEEEEC
Q 000808 837 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVG 913 (1275)
Q Consensus 837 rv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g 913 (1275)
|++|||||+.+|++++|||||+|||+.++..+.+.|++++++|+|||+++|+++.++.+.+|++++|+++|++++.|
T Consensus 116 rv~la~al~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiiivtH~~~~~~~~~~d~i~~l~~~g~i~~~g 192 (192)
T cd03232 116 RLTIGVELAAKPSILFLDEPTSGLDSQAAYNIVRFLKKLADSGQAILCTIHQPSASIFEKFDRLLLLKRGGKTVYFG 192 (192)
T ss_pred HHHHHHHHhcCCcEEEEeCCCcCCCHHHHHHHHHHHHHHHHcCCEEEEEEcCChHHHHhhCCEEEEEcCCCeEEeCC
Confidence 99999999999999999999999999999999999999877789999999998644678899999998647888865
No 196
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=3.9e-35 Score=322.95 Aligned_cols=213 Identities=25% Similarity=0.356 Sum_probs=175.3
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 756 (1275)
-++++|++++++.. ...+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 6 ~l~~~~l~~~~~~~---------~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~~ 74 (228)
T PRK10584 6 IVEVHHLKKSVGQG---------EHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDD--GSSGEVSLVGQPL 74 (228)
T ss_pred eEEEeeeEEEccCC---------CcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCC--CCCeeEEECCEEc
Confidence 48899999877411 001359999999999999999999999999999999999865 3489999999876
Q ss_pred Cccc------c-cceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCC
Q 000808 757 KQET------F-TRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESG 829 (1275)
Q Consensus 757 ~~~~------~-~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~ 829 (1275)
.... . ++.++|++|++.+++.+|+.||+.+....+ .....+.+++++++++.+++.+..+..+ ..
T Consensus 75 ~~~~~~~~~~~~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~ 146 (228)
T PRK10584 75 HQMDEEARAKLRAKHVGFVFQSFMLIPTLNALENVELPALLR---GESSRQSRNGAKALLEQLGLGKRLDHLP-----AQ 146 (228)
T ss_pred ccCCHHHHHHHHhheEEEEEcccccCCCcCHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCHhHhhCCh-----hh
Confidence 4311 1 246899999999999999999998765432 1223344567889999999987776665 46
Q ss_pred CCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhhhhheeecCcE
Q 000808 830 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDELFLMKRGGQ 908 (1275)
Q Consensus 830 lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~ 908 (1275)
||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ .+ +.+|++++|++ |+
T Consensus 147 LS~Ge~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~-~~~d~i~~l~~-g~ 223 (228)
T PRK10584 147 LSGGEQQRVALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQ-LA-ARCDRRLRLVN-GQ 223 (228)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HH-HhCCEEEEEEC-CE
Confidence 9999999999999999999999999999999999999999999998754 899999999976 34 56999999986 67
Q ss_pred EEE
Q 000808 909 EIY 911 (1275)
Q Consensus 909 ~~~ 911 (1275)
++.
T Consensus 224 i~~ 226 (228)
T PRK10584 224 LQE 226 (228)
T ss_pred EEe
Confidence 654
No 197
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.6e-35 Score=324.62 Aligned_cols=212 Identities=27% Similarity=0.400 Sum_probs=179.5
Q ss_pred EEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCCc
Q 000808 679 TFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 758 (1275)
Q Consensus 679 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 758 (1275)
.++|+++++. .+.+++|+|++++|||+++|+||||||||||+++|+|..++ ..|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~--~~G~i~~~g~~~~~ 66 (232)
T cd03300 2 ELENVSKFYG-------------GFVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETP--TSGEILLDGKDITN 66 (232)
T ss_pred EEEeEEEEeC-------------CeeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCC--CceEEEECCEEcCc
Confidence 5778887763 23699999999999999999999999999999999998763 47999999987643
Q ss_pred c-cccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHH
Q 000808 759 E-TFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKR 837 (1275)
Q Consensus 759 ~-~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqr 837 (1275)
. ..++.++|++|++.+++.+|+.||+.+....+ ..+....++.++++++.+|+.+..+..+ ..||+|||||
T Consensus 67 ~~~~~~~i~~~~q~~~~~~~~t~~~nl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS~G~~qr 138 (232)
T cd03300 67 LPPHKRPVNTVFQNYALFPHLTVFENIAFGLRLK---KLPKAEIKERVAEALDLVQLEGYANRKP-----SQLSGGQQQR 138 (232)
T ss_pred CChhhcceEEEecccccCCCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHHHH
Confidence 1 23467899999999988899999998765433 1223344556788999999988777665 4799999999
Q ss_pred HHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhhhhheeecCcEEEEECCC
Q 000808 838 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVGPL 915 (1275)
Q Consensus 838 v~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 915 (1275)
++|||+|+.+|++++|||||+|||+.++..+.+.|++++++ |+|||+++|++. ++.+.+|++++|++ |++++.|+.
T Consensus 139 l~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sh~~~-~~~~~~d~i~~l~~-G~~~~~~~~ 215 (232)
T cd03300 139 VAIARALVNEPKVLLLDEPLGALDLKLRKDMQLELKRLQKELGITFVFVTHDQE-EALTMSDRIAVMNK-GKIQQIGTP 215 (232)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEEecCCH
Confidence 99999999999999999999999999999999999998764 899999999985 46788999999986 788888864
No 198
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-35 Score=332.99 Aligned_cols=216 Identities=24% Similarity=0.306 Sum_probs=180.4
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 756 (1275)
.++++|+++.++. +++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 7 ~l~~~nl~~~~~~-----------~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~I~~~g~~i 73 (271)
T PRK13632 7 MIKVENVSFSYPN-----------SENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLK--PQSGEIKIDGITI 73 (271)
T ss_pred EEEEEeEEEEcCC-----------CCccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEec
Confidence 5889999987631 13469999999999999999999999999999999999865 3489999999886
Q ss_pred Cc---ccccceEEEeccCCC-CCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCH
Q 000808 757 KQ---ETFTRISGYCEQNDI-HSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLST 832 (1275)
Q Consensus 757 ~~---~~~~~~~~~v~q~~~-~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSg 832 (1275)
.. ..+++.++|++|++. .++.+|++||+.+..... ....++.+++++++++.+|+.+..++.+ +.|||
T Consensus 74 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~ 145 (271)
T PRK13632 74 SKENLKEIRKKIGIIFQNPDNQFIGATVEDDIAFGLENK---KVPPKKMKDIIDDLAKKVGMEDYLDKEP-----QNLSG 145 (271)
T ss_pred CcCCHHHHhcceEEEEeCHHHhcCcccHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCCHHHhhCCc-----ccCCH
Confidence 43 234567999999974 567789999998764322 1233444567889999999988777765 47999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhhhhheeecCcEEEE
Q 000808 833 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDELFLMKRGGQEIY 911 (1275)
Q Consensus 833 Gerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~ 911 (1275)
|||||++|||||+.+|++|+|||||+|||+.++..+.+.|++++++ ++|||+++|+++. + ..+|++++|.+ |+++.
T Consensus 146 G~~qrl~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~-~-~~~d~v~~l~~-G~i~~ 222 (271)
T PRK13632 146 GQKQRVAIASVLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDE-A-ILADKVIVFSE-GKLIA 222 (271)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhH-H-hhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999998766 5999999999863 4 47999999986 78998
Q ss_pred ECCCC
Q 000808 912 VGPLG 916 (1275)
Q Consensus 912 ~g~~~ 916 (1275)
.|+.+
T Consensus 223 ~g~~~ 227 (271)
T PRK13632 223 QGKPK 227 (271)
T ss_pred ecCHH
Confidence 88763
No 199
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-35 Score=327.98 Aligned_cols=215 Identities=22% Similarity=0.298 Sum_probs=175.3
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCC---CCceEEEEEEEcC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRK---TGGYITGNITISG 753 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~---~~~~~~G~i~~~g 753 (1275)
.++++|+++.+. .+.+|+|+|+++++||+++|+||||||||||+++|+|.. ++.+.+|+|.++|
T Consensus 3 ~l~~~~~~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g 69 (250)
T PRK14245 3 KIDARDVNFWYG-------------DFHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDG 69 (250)
T ss_pred EEEEEEEEEEEC-------------CEeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECC
Confidence 478899988763 245999999999999999999999999999999999952 2112479999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCcc----ccccccC
Q 000808 754 YPKKQ-----ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPL----RQSLVGL 824 (1275)
Q Consensus 754 ~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~----~~~~~~~ 824 (1275)
.+... ...++.++|++|++.+++ .|+.||+.+....+. ....+..++.++++++.+++.+. .+..
T Consensus 70 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 143 (250)
T PRK14245 70 RNIYDKGVQVDELRKNVGMVFQRPNPFP-KSIFENVAYGLRVNG--VKDNAFIRQRVEETLKGAALWDEVKDKLKES--- 143 (250)
T ss_pred EecccccccHHHHhhheEEEecCCccCc-ccHHHHHHHHHHHcC--CCcHHHHHHHHHHHHHHcCCCcchhhhhhCC---
Confidence 87642 123567999999988887 699999987654331 11223344567889999998642 2333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheee
Q 000808 825 PGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMK 904 (1275)
Q Consensus 825 ~~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~ 904 (1275)
...||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++. +++|||+++|+++ ++.+.+|++++|+
T Consensus 144 --~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tiiivtH~~~-~~~~~~d~v~~l~ 219 (250)
T PRK14245 144 --AFALSGGQQQRLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELK-KDYTIVIVTHNMQ-QAARVSDKTAFFY 219 (250)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHhhCCEEEEEE
Confidence 35799999999999999999999999999999999999999999999985 4799999999986 5678899999998
Q ss_pred cCcEEEEECCC
Q 000808 905 RGGQEIYVGPL 915 (1275)
Q Consensus 905 ~gg~~~~~g~~ 915 (1275)
+ |++++.|++
T Consensus 220 ~-G~~~~~~~~ 229 (250)
T PRK14245 220 M-GEMVEYDDT 229 (250)
T ss_pred C-CEEEEECCH
Confidence 6 799999986
No 200
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=1.8e-35 Score=331.05 Aligned_cols=217 Identities=28% Similarity=0.399 Sum_probs=179.0
Q ss_pred EEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCC
Q 000808 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1275)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 757 (1275)
++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~ 66 (256)
T TIGR03873 2 LRLSRVSWSAG-------------GRLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALR--PDAGTVDLAGVDLH 66 (256)
T ss_pred ceEEeEEEEEC-------------CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCC--CCCCEEEECCEEcc
Confidence 56788887763 2469999999999999999999999999999999999865 34799999998754
Q ss_pred c---ccccceEEEeccCCCCCCCCCHHHHHHHHHh-ccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHH
Q 000808 758 Q---ETFTRISGYCEQNDIHSPFVTVYESLLYSAW-LRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTE 833 (1275)
Q Consensus 758 ~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~-l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgG 833 (1275)
. ...++.++|++|++.+++.+||.||+.+... .+........+..+++.++++.+++.+..++.+ ..||||
T Consensus 67 ~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G 141 (256)
T TIGR03873 67 GLSRRARARRVALVEQDSDTAVPLTVRDVVALGRIPHRSLWAGDSPHDAAVVDRALARTELSHLADRDM-----STLSGG 141 (256)
T ss_pred cCCHHHHhhheEEecccCccCCCCCHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHcCcHhhhcCCc-----ccCCHH
Confidence 3 2234568999999877788999999987521 100000111233456788999999987777765 469999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcEEEEEC
Q 000808 834 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVG 913 (1275)
Q Consensus 834 erqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g 913 (1275)
||||++||+||+.+|++++|||||+|||+.+...+.+.|+++.++|.|||+++|+++ .+.+.+|++++|++ |+++..|
T Consensus 142 ~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g 219 (256)
T TIGR03873 142 ERQRVHVARALAQEPKLLLLDEPTNHLDVRAQLETLALVRELAATGVTVVAALHDLN-LAASYCDHVVVLDG-GRVVAAG 219 (256)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CCEEEec
Confidence 999999999999999999999999999999999999999998777899999999986 56788999999986 7899999
Q ss_pred CCC
Q 000808 914 PLG 916 (1275)
Q Consensus 914 ~~~ 916 (1275)
+.+
T Consensus 220 ~~~ 222 (256)
T TIGR03873 220 PPR 222 (256)
T ss_pred CHH
Confidence 864
No 201
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-35 Score=363.07 Aligned_cols=222 Identities=22% Similarity=0.303 Sum_probs=185.8
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 756 (1275)
-++++|+++++. ++.+|+||||++++||+++|+||||||||||+|+|+|..++++.+|+|.++|.+.
T Consensus 5 ~l~~~nl~~~~~-------------~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~ 71 (506)
T PRK13549 5 LLEMKNITKTFG-------------GVKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEEL 71 (506)
T ss_pred eEEEeeeEEEeC-------------CeEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEEC
Confidence 488999998873 2469999999999999999999999999999999999765323589999999876
Q ss_pred Ccc----cccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCH
Q 000808 757 KQE----TFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLST 832 (1275)
Q Consensus 757 ~~~----~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSg 832 (1275)
... ..++.+||++|++.+++.+||+||+.+....+.....+.++.+++++++++.+|+.+..+..+ ..|||
T Consensus 72 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 146 (506)
T PRK13549 72 QASNIRDTERAGIAIIHQELALVKELSVLENIFLGNEITPGGIMDYDAMYLRAQKLLAQLKLDINPATPV-----GNLGL 146 (506)
T ss_pred CCCCHHHHHHCCeEEEEeccccCCCCcHHHHhhhcccccccCCcCHHHHHHHHHHHHHHcCCCCCcccch-----hhCCH
Confidence 432 124568999999989999999999988653321111123344566889999999988777765 46999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcEEEEE
Q 000808 833 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYV 912 (1275)
Q Consensus 833 Gerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~ 912 (1275)
|||||++|||||+.+|++|||||||+|||+.++..+.+.|++++++|+|||+++|+++ .+.+.+|++++|++ |++++.
T Consensus 147 Gqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH~~~-~~~~~~d~v~~l~~-G~i~~~ 224 (506)
T PRK13549 147 GQQQLVEIAKALNKQARLLILDEPTASLTESETAVLLDIIRDLKAHGIACIYISHKLN-EVKAISDTICVIRD-GRHIGT 224 (506)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHH-HHHHhcCEEEEEEC-CEEeee
Confidence 9999999999999999999999999999999999999999999777999999999975 56678999999986 799999
Q ss_pred CCCCcc
Q 000808 913 GPLGRH 918 (1275)
Q Consensus 913 g~~~~~ 918 (1275)
|++.+.
T Consensus 225 ~~~~~~ 230 (506)
T PRK13549 225 RPAAGM 230 (506)
T ss_pred cccccC
Confidence 988654
No 202
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.2e-35 Score=336.56 Aligned_cols=222 Identities=17% Similarity=0.231 Sum_probs=180.6
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCC-c-eEEEEEEEcCc
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG-G-YITGNITISGY 754 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~-~-~~~G~i~~~g~ 754 (1275)
.++++|+++.+... .+...+|+||||+|++||++||+|+||||||||+++|+|..++ + +.+|+|.++|.
T Consensus 3 ~L~v~~l~~~~~~~---------~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~ 73 (326)
T PRK11022 3 LLNVDKLSVHFGDE---------SAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQ 73 (326)
T ss_pred eEEEeCeEEEECCC---------CccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCE
Confidence 37889999887421 1124699999999999999999999999999999999997542 2 35899999998
Q ss_pred cCCcc---c----ccceEEEeccCC--CCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCcc---ccccc
Q 000808 755 PKKQE---T----FTRISGYCEQND--IHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPL---RQSLV 822 (1275)
Q Consensus 755 ~~~~~---~----~~~~~~~v~q~~--~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~---~~~~~ 822 (1275)
++... . .++.++|++|++ .+.|.+|+.+++........ ....++.++++.++++.+||.+. .+..
T Consensus 74 ~i~~~~~~~~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~~--~~~~~~~~~~~~~~L~~~gL~~~~~~l~~~- 150 (326)
T PRK11022 74 DLQRISEKERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQ--GGNKKTRRQRAIDLLNQVGIPDPASRLDVY- 150 (326)
T ss_pred ECCcCCHHHHHHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHCCCCChHHHHhCC-
Confidence 86421 1 124689999998 47889999998866543321 22445556778999999999753 2333
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhh-CCCEEEEEecCCCHHHHHhhhhhh
Q 000808 823 GLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFESFDELF 901 (1275)
Q Consensus 823 ~~~~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~~~ 901 (1275)
..+|||||||||+|||||+.+|++|++||||+|||+.++..+++.|+++.+ .|.|+|++|||++ .+.+.+|+++
T Consensus 151 ----p~~LSgGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~-~~~~~adri~ 225 (326)
T PRK11022 151 ----PHQLSGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLA-LVAEAAHKII 225 (326)
T ss_pred ----chhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEE
Confidence 357999999999999999999999999999999999999999999999876 4899999999986 4667899999
Q ss_pred eeecCcEEEEECCCC
Q 000808 902 LMKRGGQEIYVGPLG 916 (1275)
Q Consensus 902 ~l~~gg~~~~~g~~~ 916 (1275)
+|.+ |+++..|+.+
T Consensus 226 vm~~-G~ive~g~~~ 239 (326)
T PRK11022 226 VMYA-GQVVETGKAH 239 (326)
T ss_pred EEEC-CEEEEECCHH
Confidence 9985 8999999864
No 203
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=1.5e-35 Score=325.64 Aligned_cols=198 Identities=24% Similarity=0.373 Sum_probs=167.0
Q ss_pred eeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCCcccccceEEEeccCCCCCCCCCHHHHHH
Q 000808 706 LNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQETFTRISGYCEQNDIHSPFVTVYESLL 785 (1275)
Q Consensus 706 L~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~~~~~~~~~~v~q~~~~~~~ltv~e~l~ 785 (1275)
|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..... ...+|++|++.+++.+|+.||+.
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~--~~~~~v~q~~~l~~~~tv~e~l~ 76 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQ--PTSGGVILEGKQITEPG--PDRMVVFQNYSLLPWLTVRENIA 76 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEECCCCC--hhheEEecCcccCCCCCHHHHHH
Confidence 579999999999999999999999999999999875 35899999998764321 12489999999999999999998
Q ss_pred HHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHH
Q 000808 786 YSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAA 865 (1275)
Q Consensus 786 ~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~ 865 (1275)
+......+ ....++.+++++++++.+|+.+..++.+ ..||||||||++|||+|+.+|++|+|||||+|||+.++
T Consensus 77 ~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~ 150 (230)
T TIGR01184 77 LAVDRVLP-DLSKSERRAIVEEHIALVGLTEAADKRP-----GQLSGGMKQRVAIARALSIRPKVLLLDEPFGALDALTR 150 (230)
T ss_pred HHHHhccc-CCCHHHHHHHHHHHHHHcCCHHHHcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHH
Confidence 76321111 2233444556889999999987777665 46999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhhhhheeecCcEEEEECCC
Q 000808 866 AIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVGPL 915 (1275)
Q Consensus 866 ~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 915 (1275)
..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |+++..|+.
T Consensus 151 ~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v~~l~~-G~i~~~~~~ 199 (230)
T TIGR01184 151 GNLQEELMQIWEEHRVTVLMVTHDVD-EALLLSDRVVMLTN-GPAANIGQI 199 (230)
T ss_pred HHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEeC-CcEecccCc
Confidence 9999999998764 899999999986 56788999999986 788888865
No 204
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=3.4e-35 Score=324.58 Aligned_cols=212 Identities=26% Similarity=0.396 Sum_probs=179.4
Q ss_pred EEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCCc
Q 000808 679 TFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 758 (1275)
Q Consensus 679 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 758 (1275)
+++|++++++ .+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +..|+|.++|.+...
T Consensus 2 ~i~~l~~~~~-------------~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~i~i~g~~~~~ 66 (237)
T TIGR00968 2 EIANISKRFG-------------SFQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQ--PDSGRIRLNGQDATR 66 (237)
T ss_pred EEEEEEEEEC-------------CeeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEcCc
Confidence 5778887763 2369999999999999999999999999999999999865 348999999987643
Q ss_pred c-cccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHH
Q 000808 759 E-TFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKR 837 (1275)
Q Consensus 759 ~-~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqr 837 (1275)
. ..++.++|++|++.+++.+|+.||+.+....+ ..+.....+.++++++.+++.+..++.. +.||+|||||
T Consensus 67 ~~~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS~G~~qr 138 (237)
T TIGR00968 67 VHARDRKIGFVFQHYALFKHLTVRDNIAFGLEIR---KHPKAKIKARVEELLELVQLEGLGDRYP-----NQLSGGQRQR 138 (237)
T ss_pred CChhhcCEEEEecChhhccCCcHHHHHHhHHHhc---CCCHHHHHHHHHHHHHHcCCHhHhhCCh-----hhCCHHHHHH
Confidence 2 23467899999999999999999998765432 1223334456789999999987777665 4699999999
Q ss_pred HHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhhhhheeecCcEEEEECCC
Q 000808 838 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVGPL 915 (1275)
Q Consensus 838 v~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 915 (1275)
++|||+|+.+|++++|||||+|||+.++..+.+.|+++.++ |+|||++||+++ ++.+.+|++++|++ |++++.|+.
T Consensus 139 l~laral~~~p~llllDEP~~~LD~~~~~~~~~~l~~~~~~~~~tvli~sH~~~-~~~~~~d~i~~l~~-g~i~~~~~~ 215 (237)
T TIGR00968 139 VALARALAVEPQVLLLDEPFGALDAKVRKELRSWLRKLHDEVHVTTVFVTHDQE-EAMEVADRIVVMSN-GKIEQIGSP 215 (237)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHhhcCEEEEEEC-CEEEEecCH
Confidence 99999999999999999999999999999999999998765 899999999985 56788999999985 789999886
No 205
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.3e-35 Score=329.35 Aligned_cols=217 Identities=24% Similarity=0.273 Sum_probs=177.3
Q ss_pred cEEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCC---ceEEEEEEEc
Q 000808 676 HSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGNITIS 752 (1275)
Q Consensus 676 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~---~~~~G~i~~~ 752 (1275)
..++++|+++.+. ++.+|+|+|++|++||+++|+||||||||||+++|+|..++ .+.+|+|.++
T Consensus 18 ~~l~~~nl~~~~~-------------~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~ 84 (267)
T PRK14235 18 IKMRARDVSVFYG-------------EKQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLD 84 (267)
T ss_pred ceEEEEeEEEEEC-------------CEEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEEC
Confidence 3689999998873 23599999999999999999999999999999999997542 1357999999
Q ss_pred CccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCcc----cccccc
Q 000808 753 GYPKKQ-----ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPL----RQSLVG 823 (1275)
Q Consensus 753 g~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~----~~~~~~ 823 (1275)
|.++.. ..+++.++|++|++.+++. |+.||+.+....+. ......+..++++++++.+++.+. .+..
T Consensus 85 g~~i~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~-~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~-- 160 (267)
T PRK14235 85 GEDIYDPRLDVVELRARVGMVFQKPNPFPK-SIYENVAYGPRIHG-LARSKAELDEIVETSLRKAGLWEEVKDRLHEP-- 160 (267)
T ss_pred CEECcccccchHHHhhceEEEecCCCCCCC-cHHHHHHHHHHhcc-cccchHHHHHHHHHHHHHcCCchhhhHHhhCC--
Confidence 987642 1245678999999888874 99999988654331 111223344567889999999642 2333
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhhee
Q 000808 824 LPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLM 903 (1275)
Q Consensus 824 ~~~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l 903 (1275)
.+.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|+++ .+...+|++++|
T Consensus 161 ---~~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~-~~tiiivtH~~~-~~~~~~d~v~~l 235 (267)
T PRK14235 161 ---GTGLSGGQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQ-NYTIVIVTHSMQ-QAARVSQRTAFF 235 (267)
T ss_pred ---cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhc-CCeEEEEEcCHH-HHHhhCCEEEEE
Confidence 357999999999999999999999999999999999999999999999865 789999999976 466789999999
Q ss_pred ecCcEEEEECCC
Q 000808 904 KRGGQEIYVGPL 915 (1275)
Q Consensus 904 ~~gg~~~~~g~~ 915 (1275)
++ |+++..|+.
T Consensus 236 ~~-G~i~~~g~~ 246 (267)
T PRK14235 236 HL-GNLVEVGDT 246 (267)
T ss_pred EC-CEEEEeCCH
Confidence 85 799999875
No 206
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-35 Score=330.73 Aligned_cols=219 Identities=26% Similarity=0.354 Sum_probs=177.6
Q ss_pred EEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCc------eEEEEEEE
Q 000808 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG------YITGNITI 751 (1275)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~------~~~G~i~~ 751 (1275)
++++|+++++. ++.+|+|+|++|++||+++|+||||||||||+++|+|..++. ..+|+|.+
T Consensus 2 l~~~nl~~~~~-------------~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~ 68 (272)
T PRK13547 2 LTADHLHVARR-------------HRAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTL 68 (272)
T ss_pred eEEEEEEEEEC-------------CEeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEE
Confidence 56888887763 246999999999999999999999999999999999976532 12799999
Q ss_pred cCccCCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHhccC-CCCCCHHHHHHHHHHHHHHcCCCccccccccCCCC
Q 000808 752 SGYPKKQ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRL-PPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGE 827 (1275)
Q Consensus 752 ~g~~~~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~-~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~ 827 (1275)
+|.+... ..+++.++|++|++..++.+|++||+.+...... .......+.+++++++++.+|+.+..++.+
T Consensus 69 ~g~~~~~~~~~~~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~----- 143 (272)
T PRK13547 69 NGEPLAAIDAPRLARLRAVLPQAAQPAFAFSAREIVLLGRYPHARRAGALTHRDGEIAWQALALAGATALVGRDV----- 143 (272)
T ss_pred CCEEcccCCHHHHHhhcEEecccCCCCCCCcHHHHHhhcccccccccccCCHHHHHHHHHHHHHcCcHhhhcCCc-----
Confidence 9987642 2334568999999876667999999987532110 001111234456788999999987766654
Q ss_pred CCCCHHHHHHHHHHHHHh---------hCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhh
Q 000808 828 SGLSTEQRKRLTIAVELV---------ANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESF 897 (1275)
Q Consensus 828 ~~lSgGerqrv~ia~~l~---------~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~ 897 (1275)
..||||||||++|||+|+ .+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|+++ ++.+.+
T Consensus 144 ~~LSgG~~qrv~laral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~-~~~~~~ 222 (272)
T PRK13547 144 TTLSGGELARVQFARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPN-LAARHA 222 (272)
T ss_pred ccCCHHHHHHHHHHHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhC
Confidence 469999999999999999 599999999999999999999999999998765 899999999986 566789
Q ss_pred hhhheeecCcEEEEECCCC
Q 000808 898 DELFLMKRGGQEIYVGPLG 916 (1275)
Q Consensus 898 d~~~~l~~gg~~~~~g~~~ 916 (1275)
|++++|.+ |+++..|+.+
T Consensus 223 d~i~~l~~-G~i~~~g~~~ 240 (272)
T PRK13547 223 DRIAMLAD-GAIVAHGAPA 240 (272)
T ss_pred CEEEEEEC-CeEEEecCHH
Confidence 99999986 7999999864
No 207
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-35 Score=333.72 Aligned_cols=218 Identities=23% Similarity=0.279 Sum_probs=181.0
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCce-EEEEEEEcCcc
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGY-ITGNITISGYP 755 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~-~~G~i~~~g~~ 755 (1275)
.++++|+++.++. ..+.+|+|+|++|++||+++|+||||||||||+++|+|..++.. ..|+|.++|.+
T Consensus 5 ~l~i~~l~~~~~~-----------~~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~ 73 (282)
T PRK13640 5 IVEFKHVSFTYPD-----------SKKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGIT 73 (282)
T ss_pred eEEEEEEEEEcCC-----------CCccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEE
Confidence 4889999987731 12359999999999999999999999999999999999765321 13899999988
Q ss_pred CCc---ccccceEEEeccCCC-CCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCC
Q 000808 756 KKQ---ETFTRISGYCEQNDI-HSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLS 831 (1275)
Q Consensus 756 ~~~---~~~~~~~~~v~q~~~-~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lS 831 (1275)
... ...++.+||++|++. .++..||+||+.|..... ..+.++.+++++++++.+||.+..+..+ +.||
T Consensus 74 ~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~LS 145 (282)
T PRK13640 74 LTAKTVWDIREKVGIVFQNPDNQFVGATVGDDVAFGLENR---AVPRPEMIKIVRDVLADVGMLDYIDSEP-----ANLS 145 (282)
T ss_pred CCcCCHHHHHhheEEEEECHHHhhccCCHHHHHHhhHHhC---CCCHHHHHHHHHHHHHHCCChhHhcCCc-----ccCC
Confidence 643 123567899999974 567789999998764322 2344555667889999999988777765 5799
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhhhhheeecCcEEE
Q 000808 832 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDELFLMKRGGQEI 910 (1275)
Q Consensus 832 gGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~ 910 (1275)
||||||++||+||+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++. + ..+|++++|.+ |+++
T Consensus 146 ~G~~qrv~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~-~-~~~d~i~~l~~-G~i~ 222 (282)
T PRK13640 146 GGQKQRVAIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDIDE-A-NMADQVLVLDD-GKLL 222 (282)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHH-H-HhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999998764 8999999999863 4 57999999985 7999
Q ss_pred EECCCC
Q 000808 911 YVGPLG 916 (1275)
Q Consensus 911 ~~g~~~ 916 (1275)
..|+++
T Consensus 223 ~~g~~~ 228 (282)
T PRK13640 223 AQGSPV 228 (282)
T ss_pred EeCCHH
Confidence 999863
No 208
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=3e-35 Score=318.99 Aligned_cols=225 Identities=22% Similarity=0.311 Sum_probs=182.5
Q ss_pred EEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCC-C-c-eEEEEEEEcCc
Q 000808 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT-G-G-YITGNITISGY 754 (1275)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~-~-~-~~~G~i~~~g~ 754 (1275)
++++|++.++.... +..++++||||++++||++||+|.|||||||+.++|.|..+ + + ..+|+|.++|.
T Consensus 2 L~v~nL~v~f~~~~---------g~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~ 72 (316)
T COG0444 2 LEVKNLSVSFPTDA---------GVVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGK 72 (316)
T ss_pred ceEeeeEEEEecCC---------ccEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCc
Confidence 56788887775321 23569999999999999999999999999999999999765 2 3 45789999998
Q ss_pred cCCc---c----cccceEEEeccCCC--CCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCC
Q 000808 755 PKKQ---E----TFTRISGYCEQNDI--HSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLP 825 (1275)
Q Consensus 755 ~~~~---~----~~~~~~~~v~q~~~--~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~ 825 (1275)
++-. + .+.+.+++++|++. +.|.+|+.+.+.-......... .+++..+++.++|+.+|+.+.....- .
T Consensus 73 ~l~~l~~~~~~~iRG~~I~mIfQ~p~~sLnPv~~Ig~Qi~E~l~~h~~~~-~~~ea~~~a~~~L~~Vgi~~~~~~~~--~ 149 (316)
T COG0444 73 DLLSLSEKELRKIRGKEIAMIFQDPMTSLNPVMTIGDQIAEVLRLHGKGL-SKKEAKERAIELLELVGIPDPERRLK--S 149 (316)
T ss_pred ccccCCHHHHHhhcCceEEEEEcCchhhcCChhhHHHHHHHHHHHhhcch-hhHHHHHHHHHHHHHcCCCCHHHHHh--h
Confidence 6532 1 12357999999964 6788999888865554322111 34556778899999999986532221 2
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhh-CCCEEEEEecCCCHHHHHhhhhhheee
Q 000808 826 GESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFESFDELFLMK 904 (1275)
Q Consensus 826 ~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~~~~l~ 904 (1275)
.+.+|||||||||.||.||+.+|++||.||||++||...+.+|+++|+++.+ .|.++|++|||+. -+.+.+|||+||.
T Consensus 150 YPhelSGGMrQRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~e~~~aiilITHDl~-vva~~aDri~VMY 228 (316)
T COG0444 150 YPHELSGGMRQRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQREKGTALILITHDLG-VVAEIADRVAVMY 228 (316)
T ss_pred CCcccCCcHHHHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcceEEEEE
Confidence 2457999999999999999999999999999999999999999999999986 5999999999986 4789999999999
Q ss_pred cCcEEEEECCCC
Q 000808 905 RGGQEIYVGPLG 916 (1275)
Q Consensus 905 ~gg~~~~~g~~~ 916 (1275)
. |++|..|+..
T Consensus 229 a-G~iVE~g~~~ 239 (316)
T COG0444 229 A-GRIVEEGPVE 239 (316)
T ss_pred C-cEEEEeCCHH
Confidence 5 8999999974
No 209
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=2.8e-35 Score=324.86 Aligned_cols=201 Identities=29% Similarity=0.407 Sum_probs=168.8
Q ss_pred cccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCCc--ccccceEEEec-cCCCCCCC
Q 000808 701 DKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ--ETFTRISGYCE-QNDIHSPF 777 (1275)
Q Consensus 701 ~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~--~~~~~~~~~v~-q~~~~~~~ 777 (1275)
+.+++|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ..+++.++|++ |++.+++.
T Consensus 32 ~~~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~ 109 (236)
T cd03267 32 REVEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQ--PTSGEVRVAGLVPWKRRKKFLRRIGVVFGQKTQLWWD 109 (236)
T ss_pred CCeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCEEccccchhhcccEEEEcCCccccCCC
Confidence 34579999999999999999999999999999999999865 348999999986432 23456789997 55677788
Q ss_pred CCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCC
Q 000808 778 VTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPT 857 (1275)
Q Consensus 778 ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~~l~~~p~illlDEPt 857 (1275)
+|++|++.+....+ ....++..+.++++++.+|+.+..++.+ ..||||||||++||++|+.+|++++|||||
T Consensus 110 ~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~qrl~la~al~~~p~llllDEPt 181 (236)
T cd03267 110 LPVIDSFYLLAAIY---DLPPARFKKRLDELSELLDLEELLDTPV-----RQLSLGQRMRAEIAAALLHEPEILFLDEPT 181 (236)
T ss_pred CcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCChhHhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCC
Confidence 99999998765433 1233444556788999999988777765 469999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhhhhheeecCcEEEEEC
Q 000808 858 SGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVG 913 (1275)
Q Consensus 858 sgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g 913 (1275)
+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|.+ |++++.|
T Consensus 182 ~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~-~~~~~~d~i~~l~~-G~i~~~g 236 (236)
T cd03267 182 IGLDVVAQENIRNFLKEYNRERGTTVLLTSHYMK-DIEALARRVLVIDK-GRLLYDG 236 (236)
T ss_pred CCCCHHHHHHHHHHHHHHHhcCCCEEEEEecCHH-HHHHhCCEEEEEeC-CEEEecC
Confidence 999999999999999998764 899999999985 56778999999986 7887654
No 210
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4e-35 Score=330.29 Aligned_cols=216 Identities=24% Similarity=0.297 Sum_probs=180.2
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 756 (1275)
.++++|+++.+.. ..+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 7 ~l~i~~l~~~~~~-----------~~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~ 73 (269)
T PRK13648 7 IIVFKNVSFQYQS-----------DASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEK--VKSGEIFYNNQAI 73 (269)
T ss_pred eEEEEEEEEEcCC-----------CCCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEC
Confidence 5889999988731 12359999999999999999999999999999999999865 3489999999876
Q ss_pred Cc---ccccceEEEeccCCC-CCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCH
Q 000808 757 KQ---ETFTRISGYCEQNDI-HSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLST 832 (1275)
Q Consensus 757 ~~---~~~~~~~~~v~q~~~-~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSg 832 (1275)
.. ...++.++|++|++. +++..|+.+|+.+..... ....++..++++++++.+++.+..+..+ +.|||
T Consensus 74 ~~~~~~~~~~~i~~v~q~~~~~~~~~~v~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~ 145 (269)
T PRK13648 74 TDDNFEKLRKHIGIVFQNPDNQFVGSIVKYDVAFGLENH---AVPYDEMHRRVSEALKQVDMLERADYEP-----NALSG 145 (269)
T ss_pred CcCCHHHHHhheeEEEeChHHhcccccHHHHHHhhHHhc---CCCHHHHHHHHHHHHHHcCCchhhhCCc-----ccCCH
Confidence 43 234567899999974 677789999998764322 2233444566889999999987777654 47999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhhhhheeecCcEEEE
Q 000808 833 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDELFLMKRGGQEIY 911 (1275)
Q Consensus 833 Gerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~ 911 (1275)
|||||++|||||+.+|++++|||||+|||+.++..+.+.|+++.++ |+|||+++|+++ ++. .+|++++|++ |++++
T Consensus 146 G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~-~~~-~~d~i~~l~~-G~i~~ 222 (269)
T PRK13648 146 GQKQRVAIAGVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLS-EAM-EADHVIVMNK-GTVYK 222 (269)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCch-HHh-cCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999998764 899999999986 344 4999999986 79999
Q ss_pred ECCCC
Q 000808 912 VGPLG 916 (1275)
Q Consensus 912 ~g~~~ 916 (1275)
.|+++
T Consensus 223 ~g~~~ 227 (269)
T PRK13648 223 EGTPT 227 (269)
T ss_pred ecCHH
Confidence 99874
No 211
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.4e-35 Score=334.21 Aligned_cols=220 Identities=20% Similarity=0.307 Sum_probs=177.5
Q ss_pred cEEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCcc
Q 000808 676 HSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 755 (1275)
Q Consensus 676 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~ 755 (1275)
..++++|++++++... ...+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+
T Consensus 5 ~~l~i~nl~~~~~~~~--------~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~ 74 (289)
T PRK13645 5 KDIILDNVSYTYAKKT--------PFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLII--SETGQTIVGDYA 74 (289)
T ss_pred ceEEEEEEEEEeCCCC--------ccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEE
Confidence 3588999998874110 001359999999999999999999999999999999999865 347999999987
Q ss_pred CCc--------ccccceEEEeccCCCC-CCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCC-ccccccccCC
Q 000808 756 KKQ--------ETFTRISGYCEQNDIH-SPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELN-PLRQSLVGLP 825 (1275)
Q Consensus 756 ~~~--------~~~~~~~~~v~q~~~~-~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~ 825 (1275)
... ..+++.++|++|++.. +...|++||+.+..... ....++..++++++++.++|. +..++.+
T Consensus 75 i~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~ll~~~~L~~~~~~~~~--- 148 (289)
T PRK13645 75 IPANLKKIKEVKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNL---GENKQEAYKKVPELLKLVQLPEDYVKRSP--- 148 (289)
T ss_pred ccccccccccHHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCChhHhcCCh---
Confidence 531 2345678999999732 22369999998764321 123344445678899999994 5566554
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhhhhheee
Q 000808 826 GESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDELFLMK 904 (1275)
Q Consensus 826 ~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~ 904 (1275)
+.||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|+++ ++.+.+|++++|+
T Consensus 149 --~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~-~~~~~~d~i~~l~ 225 (289)
T PRK13645 149 --FELSGGQKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMD-QVLRIADEVIVMH 225 (289)
T ss_pred --hhCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEE
Confidence 479999999999999999999999999999999999999999999998764 899999999986 5678899999998
Q ss_pred cCcEEEEECCC
Q 000808 905 RGGQEIYVGPL 915 (1275)
Q Consensus 905 ~gg~~~~~g~~ 915 (1275)
+ |++++.|+.
T Consensus 226 ~-G~i~~~g~~ 235 (289)
T PRK13645 226 E-GKVISIGSP 235 (289)
T ss_pred C-CEEEEeCCH
Confidence 6 789998875
No 212
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.1e-35 Score=326.08 Aligned_cols=215 Identities=21% Similarity=0.270 Sum_probs=175.3
Q ss_pred EEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCC-ceEEEEEEEcCccC
Q 000808 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG-GYITGNITISGYPK 756 (1275)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~-~~~~G~i~~~g~~~ 756 (1275)
++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+.+|+|.++|.+.
T Consensus 3 ~~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i 69 (246)
T PRK14269 3 AKTTNLNLFYG-------------KKQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDV 69 (246)
T ss_pred eeeeeeEEEEC-------------CEeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEec
Confidence 56788888773 23599999999999999999999999999999999997531 24589999999876
Q ss_pred Cc---ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCcc----ccccccCCCCCC
Q 000808 757 KQ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPL----RQSLVGLPGESG 829 (1275)
Q Consensus 757 ~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~----~~~~~~~~~~~~ 829 (1275)
.. ..+++.++|++|++.+++ .|++||+.+....+.. .......+++++++++.+++.+. .+.. .+.
T Consensus 70 ~~~~~~~~~~~i~~~~q~~~l~~-~tv~eni~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~-----~~~ 142 (246)
T PRK14269 70 KNQDVVALRKNVGMVFQQPNVFV-KSIYENISYAPKLHGM-IKNKDEEEALVVDCLQKVGLFEEVKDKLKQN-----ALA 142 (246)
T ss_pred ccCCHHHHhhhEEEEecCCcccc-ccHHHHhhhHHhhcCc-ccChHHHHHHHHHHHHHcCCChhhhHHhcCC-----ccc
Confidence 43 234567899999998887 6999999886543311 01123344567889999999532 2332 357
Q ss_pred CCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcEE
Q 000808 830 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQE 909 (1275)
Q Consensus 830 lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~ 909 (1275)
||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++.+ |+|||++||+++ ++.+.+|++++|++ |++
T Consensus 143 LS~G~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~~~~~~d~i~~l~~-G~i 219 (246)
T PRK14269 143 LSGGQQQRLCIARALAIKPKLLLLDEPTSALDPISSGVIEELLKELSH-NLSMIMVTHNMQ-QGKRVADYTAFFHL-GEL 219 (246)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC-CCEEEEEecCHH-HHHhhCcEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999864 899999999985 56788999999986 799
Q ss_pred EEECCC
Q 000808 910 IYVGPL 915 (1275)
Q Consensus 910 ~~~g~~ 915 (1275)
+..|+.
T Consensus 220 ~~~g~~ 225 (246)
T PRK14269 220 IEFGES 225 (246)
T ss_pred EEECCH
Confidence 999875
No 213
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=9.7e-36 Score=312.98 Aligned_cols=181 Identities=26% Similarity=0.369 Sum_probs=150.4
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCccc-------cceEEEeccccccCCCCCHHHHHHHHHh
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFVP-------QRTAAYISQHDVHIGEMTVRETLAFSAR 73 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~~~-------~~~~~yv~Q~~~~~~~lTv~e~l~f~~~ 73 (1275)
+++|+|||||||||||++|.|...|+ +|.|.++|.++..... ++.+|||+|+..++|++||+||+.+.+.
T Consensus 33 ~vaI~GpSGSGKSTLLniig~ld~pt---~G~v~i~g~d~~~l~~~~~~~~R~~~iGfvFQ~~nLl~~ltv~ENv~lpl~ 109 (226)
T COG1136 33 FVAIVGPSGSGKSTLLNLLGGLDKPT---SGEVLINGKDLTKLSEKELAKLRRKKIGFVFQNFNLLPDLTVLENVELPLL 109 (226)
T ss_pred EEEEECCCCCCHHHHHHHHhcccCCC---CceEEECCEEcCcCCHHHHHHHHHHhEEEECccCCCCCCCCHHHHHHhHHH
Confidence 48999999999999999999999997 9999999988765431 3579999999999999999999999776
Q ss_pred ccCCCCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchh
Q 000808 74 CQGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRV 153 (1275)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv 153 (1275)
+.+...+ +.....+.+++.+||++..+ ++++..|||||||||
T Consensus 110 ~~~~~~~----------------------------------~~~~~~~~l~~~lgl~~~~~----~~~p~eLSGGqqQRV 151 (226)
T COG1136 110 IAGKSAG----------------------------------RRKRAAEELLEVLGLEDRLL----KKKPSELSGGQQQRV 151 (226)
T ss_pred HcCCChh----------------------------------HHHHHHHHHHHhcCChhhhc----cCCchhcCHHHHHHH
Confidence 5442110 11223567888999986554 245678999999999
Q ss_pred hHHHHHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeE
Q 000808 154 TTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQI 224 (1275)
Q Consensus 154 siA~al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i 224 (1275)
+|||||+.+|++++.||||.+||+.++..+++.++++++.. ++++++++|+. ++...|||++.|.+|++
T Consensus 152 AIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~-g~tii~VTHd~-~lA~~~dr~i~l~dG~~ 220 (226)
T COG1136 152 AIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKER-GKTIIMVTHDP-ELAKYADRVIELKDGKI 220 (226)
T ss_pred HHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhc-CCEEEEEcCCH-HHHHhCCEEEEEeCCee
Confidence 99999999999999999999999999999999999987654 55555567765 67789999999999984
No 214
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins.
Probab=100.00 E-value=2.7e-35 Score=319.09 Aligned_cols=189 Identities=23% Similarity=0.365 Sum_probs=161.2
Q ss_pred cceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCC---c----ccccceEEEeccCCCCC
Q 000808 703 LMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK---Q----ETFTRISGYCEQNDIHS 775 (1275)
Q Consensus 703 ~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~---~----~~~~~~~~~v~q~~~~~ 775 (1275)
+++|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.. . ...++.++|++|++.++
T Consensus 11 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 88 (206)
T TIGR03608 11 KIILDDLNLTIEKGKMYAIIGESGSGKSTLLNIIGLLEK--FDSGQVYLNGKETPPLNSKKASKFRREKLGYLFQNFALI 88 (206)
T ss_pred EEEEeceEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC--CCCeEEEECCEEccccchhhHHHHHHhCeeEEecchhhc
Confidence 469999999999999999999999999999999999865 34899999998742 1 12346799999999999
Q ss_pred CCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeC
Q 000808 776 PFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDE 855 (1275)
Q Consensus 776 ~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~~l~~~p~illlDE 855 (1275)
+.+|++||+.+..... .....+..++++++++.+|+.+..++.+ .+||||||||++|||||+.+|++|+|||
T Consensus 89 ~~~t~~e~~~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS~G~~qr~~laral~~~p~llllDE 160 (206)
T TIGR03608 89 ENETVEENLDLGLKYK---KLSKKEKREKKKEALEKVGLNLKLKQKI-----YELSGGEQQRVALARAILKDPPLILADE 160 (206)
T ss_pred cCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCchhhhcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEeC
Confidence 9999999998865432 1233444567889999999988777765 4699999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhhee
Q 000808 856 PTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLM 903 (1275)
Q Consensus 856 PtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l 903 (1275)
||+|||+.+...+.+.|+++.++|+|||+++|++. ..+.+|++++|
T Consensus 161 Pt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~--~~~~~d~i~~l 206 (206)
T TIGR03608 161 PTGSLDPKNRDEVLDLLLELNDEGKTIIIVTHDPE--VAKQADRVIEL 206 (206)
T ss_pred CcCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH--HHhhcCEEEeC
Confidence 99999999999999999998777899999999975 44678988765
No 215
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.9e-35 Score=332.83 Aligned_cols=220 Identities=20% Similarity=0.288 Sum_probs=180.6
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 756 (1275)
-++++|++++++... ....+.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 4 ~l~~~~l~~~~~~~~-------~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~i~g~~i 74 (280)
T PRK13633 4 MIKCKNVSYKYESNE-------ESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLI--PSEGKVYVDGLDT 74 (280)
T ss_pred eEEEeeeEEEcCCCC-------CCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEec
Confidence 478999998874110 0013469999999999999999999999999999999999866 3489999999876
Q ss_pred Cc----ccccceEEEeccCCC-CCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCC
Q 000808 757 KQ----ETFTRISGYCEQNDI-HSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLS 831 (1275)
Q Consensus 757 ~~----~~~~~~~~~v~q~~~-~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lS 831 (1275)
.. ...++.+||++|++. .+...|+.|++.|..... .....+.+++++++++.+||.+..++.+ ..||
T Consensus 75 ~~~~~~~~~~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LS 146 (280)
T PRK13633 75 SDEENLWDIRNKAGMVFQNPDNQIVATIVEEDVAFGPENL---GIPPEEIRERVDESLKKVGMYEYRRHAP-----HLLS 146 (280)
T ss_pred cccccHHHHhhheEEEecChhhhhccccHHHHHHhhHhhc---CCCHHHHHHHHHHHHHHCCCHhHhhCCc-----ccCC
Confidence 43 224567999999974 233468999998865422 2234455567899999999988877775 4799
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhhhhheeecCcEEE
Q 000808 832 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDELFLMKRGGQEI 910 (1275)
Q Consensus 832 gGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~ 910 (1275)
||||||++|||+|+.+|++++|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++. .+|++++|++ |+++
T Consensus 147 ~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~-~~~-~~d~v~~l~~-G~i~ 223 (280)
T PRK13633 147 GGQKQRVAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYME-EAV-EADRIIVMDS-GKVV 223 (280)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChH-HHh-cCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999998764 899999999987 344 4999999986 7899
Q ss_pred EECCCC
Q 000808 911 YVGPLG 916 (1275)
Q Consensus 911 ~~g~~~ 916 (1275)
..|+++
T Consensus 224 ~~g~~~ 229 (280)
T PRK13633 224 MEGTPK 229 (280)
T ss_pred EecCHH
Confidence 999864
No 216
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-35 Score=325.99 Aligned_cols=209 Identities=26% Similarity=0.352 Sum_probs=174.5
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 756 (1275)
.++++|+++++. ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i 67 (241)
T PRK14250 3 EIEFKEVSYSSF-------------GKEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLID--PTEGSILIDGVDI 67 (241)
T ss_pred eEEEEeEEEEeC-------------CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEh
Confidence 478899988763 2359999999999999999999999999999999999865 3479999999875
Q ss_pred Cc---ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCC-ccccccccCCCCCCCCH
Q 000808 757 KQ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELN-PLRQSLVGLPGESGLST 832 (1275)
Q Consensus 757 ~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~~~~lSg 832 (1275)
.. ...++.++|++|++.+++ .|++||+.+....+ . ...++++++++.+++. +..++.+ ..|||
T Consensus 68 ~~~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~~~---~----~~~~~~~~~l~~~~l~~~~~~~~~-----~~LS~ 134 (241)
T PRK14250 68 KTIDVIDLRRKIGMVFQQPHLFE-GTVKDNIEYGPMLK---G----EKNVDVEYYLSIVGLNKEYATRDV-----KNLSG 134 (241)
T ss_pred hhcChHHhhhcEEEEecCchhch-hhHHHHHhcchhhc---C----cHHHHHHHHHHHcCCCHHHhhCCc-----ccCCH
Confidence 32 234567899999988876 69999997653221 1 1134577899999996 4555543 47999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhhhhheeecCcEEEE
Q 000808 833 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDELFLMKRGGQEIY 911 (1275)
Q Consensus 833 Gerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~ 911 (1275)
|||||++|||||+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||++||+++ ++.+.+|++++|.+ |+++.
T Consensus 135 G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~ 212 (241)
T PRK14250 135 GEAQRVSIARTLANNPEVLLLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNME-QAKRIGDYTAFLNK-GILVE 212 (241)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHH-HHHHhCCEEEEEeC-CEEEE
Confidence 9999999999999999999999999999999999999999998764 899999999986 56778999999986 78898
Q ss_pred ECCC
Q 000808 912 VGPL 915 (1275)
Q Consensus 912 ~g~~ 915 (1275)
.|++
T Consensus 213 ~~~~ 216 (241)
T PRK14250 213 YAKT 216 (241)
T ss_pred eCCH
Confidence 8876
No 217
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=5.6e-35 Score=335.69 Aligned_cols=225 Identities=20% Similarity=0.293 Sum_probs=182.4
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCc-eEEEEEEEcCcc
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YITGNITISGYP 755 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~-~~~G~i~~~g~~ 755 (1275)
.++++|+++.+... .+...+|+||||+|++||++||+|+||||||||+++|+|..++. ..+|+|.++|.+
T Consensus 12 ~L~i~~l~~~~~~~---------~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~ 82 (330)
T PRK09473 12 LLDVKDLRVTFSTP---------DGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGRE 82 (330)
T ss_pred eEEEeCeEEEEecC---------CCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEE
Confidence 58899999887421 12346999999999999999999999999999999999976531 237999999988
Q ss_pred CCc---cc---c-cceEEEeccCC--CCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCC
Q 000808 756 KKQ---ET---F-TRISGYCEQND--IHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPG 826 (1275)
Q Consensus 756 ~~~---~~---~-~~~~~~v~q~~--~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~ 826 (1275)
+.. .. + ++.++|++|++ .+.|.+|+.+++........ ..+.++..+++.++++.+||.+..+.. +..
T Consensus 83 i~~~~~~~~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~--~~~~~~~~~~~~~~L~~vgL~~~~~~~--~~~ 158 (330)
T PRK09473 83 ILNLPEKELNKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHK--GMSKAEAFEESVRMLDAVKMPEARKRM--KMY 158 (330)
T ss_pred CCcCCHHHHHHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCCChHHHh--cCC
Confidence 643 11 1 24799999998 67899999999876654321 234455566788999999997533221 122
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhhhhheeec
Q 000808 827 ESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDELFLMKR 905 (1275)
Q Consensus 827 ~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~ 905 (1275)
+.+||||||||++|||||+.+|++|++||||+|||+.++..+++.|+++.++ |.|+|++|||++ .+.+.+|++++|.+
T Consensus 159 p~~LSgG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~-~~~~~~Dri~vm~~ 237 (330)
T PRK09473 159 PHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLG-VVAGICDKVLVMYA 237 (330)
T ss_pred cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHH-HHHHhCCEEEEEEC
Confidence 4679999999999999999999999999999999999999999999998765 899999999986 46678999999985
Q ss_pred CcEEEEECCCC
Q 000808 906 GGQEIYVGPLG 916 (1275)
Q Consensus 906 gg~~~~~g~~~ 916 (1275)
|+++..|+.+
T Consensus 238 -G~ive~g~~~ 247 (330)
T PRK09473 238 -GRTMEYGNAR 247 (330)
T ss_pred -CEEEEECCHH
Confidence 7999999864
No 218
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.9e-35 Score=327.22 Aligned_cols=224 Identities=22% Similarity=0.260 Sum_probs=180.4
Q ss_pred CCCCcEEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCC---ceEEEE
Q 000808 672 PFEPHSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGN 748 (1275)
Q Consensus 672 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~---~~~~G~ 748 (1275)
|..+..++++|++++++ .+++|+|+|+++++||+++|+||||||||||+++|+|..++ .+.+|+
T Consensus 15 ~~~~~~l~~~nl~~~~~-------------~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~ 81 (267)
T PRK14237 15 PEEEIALSTKDLHVYYG-------------KKEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQ 81 (267)
T ss_pred CCCCeEEEEeeEEEEEC-------------CeeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceE
Confidence 33445799999998873 24699999999999999999999999999999999997542 135899
Q ss_pred EEEcCccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCcccccccc
Q 000808 749 ITISGYPKKQ-----ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVG 823 (1275)
Q Consensus 749 i~~~g~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~ 823 (1275)
|.++|.+... ...++.++|++|++.+++ .|++||+.+..... + ....+..++++.++++.+++.+..+....
T Consensus 82 i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~-~-~~~~~~~~~~~~~~l~~~~l~~~i~~~~~ 158 (267)
T PRK14237 82 ILYRGIDINRKEINVYEMRKHIGMVFQRPNPFA-KSIYENITFALERA-G-VKDKKVLDEIVETSLKQAALWDQVKDDLH 158 (267)
T ss_pred EEECCEEcccccCChHHHhcceEEEecCCcccc-ccHHHHHHhHHHhc-C-CCCHHHHHHHHHHHHHHcCCCchhhhhhc
Confidence 9999987632 123567899999988887 69999998864322 1 12333445668889999998542211111
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhhee
Q 000808 824 LPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLM 903 (1275)
Q Consensus 824 ~~~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l 903 (1275)
...+.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ +.|||+++|+++ ++.+.+|++++|
T Consensus 159 -~~~~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~~~~~~d~i~~l 235 (267)
T PRK14237 159 -KSALTLSGGQQQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELKK-NYTIIIVTHNMQ-QAARASDYTAFF 235 (267)
T ss_pred -CCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEecCHH-HHHHhcCEEEEE
Confidence 12357999999999999999999999999999999999999999999999854 799999999986 577889999999
Q ss_pred ecCcEEEEECCC
Q 000808 904 KRGGQEIYVGPL 915 (1275)
Q Consensus 904 ~~gg~~~~~g~~ 915 (1275)
++ |+++..|++
T Consensus 236 ~~-G~i~~~g~~ 246 (267)
T PRK14237 236 YL-GDLIEYDKT 246 (267)
T ss_pred EC-CEEEEeCCH
Confidence 85 799999986
No 219
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6e-35 Score=322.19 Aligned_cols=211 Identities=27% Similarity=0.387 Sum_probs=177.9
Q ss_pred EEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCCc
Q 000808 679 TFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 758 (1275)
Q Consensus 679 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 758 (1275)
+++|+++.+. . ++|+|+|++++|||+++|+||||||||||+++|+|..+ +..|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~-~~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~--p~~G~v~i~g~~~~~ 65 (235)
T cd03299 2 KVENLSKDWK-------------E-FKLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIK--PDSGKILLNGKDITN 65 (235)
T ss_pred eeEeEEEEeC-------------C-ceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCEEcCc
Confidence 4677776652 1 28999999999999999999999999999999999865 347999999987643
Q ss_pred c-cccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHH
Q 000808 759 E-TFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKR 837 (1275)
Q Consensus 759 ~-~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqr 837 (1275)
. ..++.++|++|++.+++.+|+.||+.+..... .....+.++.+.++++.+||.+..++.+ +.||||||||
T Consensus 66 ~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qr 137 (235)
T cd03299 66 LPPEKRDISYVPQNYALFPHMTVYKNIAYGLKKR---KVDKKEIERKVLEIAEMLGIDHLLNRKP-----ETLSGGEQQR 137 (235)
T ss_pred CChhHcCEEEEeecCccCCCccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCChhHHhcCc-----ccCCHHHHHH
Confidence 1 23457899999999999999999998764332 1223444556788999999988777765 4699999999
Q ss_pred HHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhhhhheeecCcEEEEECCC
Q 000808 838 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVGPL 915 (1275)
Q Consensus 838 v~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 915 (1275)
++|||||+.+|++++|||||+|||+.++..+.+.|++++++ |+|||+++|++. ++.+.+|++++|++ |+++..|+.
T Consensus 138 l~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~~~tili~tH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 214 (235)
T cd03299 138 VAIARALVVNPKILLLDEPFSALDVRTKEKLREELKKIRKEFGVTVLHVTHDFE-EAWALADKVAIMLN-GKLIQVGKP 214 (235)
T ss_pred HHHHHHHHcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEecCH
Confidence 99999999999999999999999999999999999998764 899999999985 46778999999986 789998875
No 220
>cd03213 ABCG_EPDR ABCG transporters are involved in eye pigment (EP) precursor transport, regulation of lipid-trafficking mechanisms, and pleiotropic drug resistance (DR). DR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. Compared to other members of the ABC transporter subfamilies, the ABCG transporter family is composed of proteins that have an ATP-binding cassette domain at the N-terminus and a TM (transmembrane) domain at the C-terminus.
Probab=100.00 E-value=5.8e-35 Score=311.90 Aligned_cols=190 Identities=50% Similarity=0.846 Sum_probs=162.0
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCC--CCceEEEEEEEcCc
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRK--TGGYITGNITISGY 754 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~--~~~~~~G~i~~~g~ 754 (1275)
.++++|+++.++... ....+++|+|+|+++++||+++|+||||||||||+++|+|.. + +.+|+|.++|.
T Consensus 3 ~l~~~~ls~~~~~~~-------~~~~~~~l~~~~~~i~~Ge~~~l~G~nGsGKStLl~~i~Gl~~~~--~~~G~i~~~g~ 73 (194)
T cd03213 3 TLSFRNLTVTVKSSP-------SKSGKQLLKNVSGKAKPGELTAIMGPSGAGKSTLLNALAGRRTGL--GVSGEVLINGR 73 (194)
T ss_pred EEEEEeeEEEEecCC-------CcccccceecceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC--CCceEEEECCE
Confidence 578999998874210 001246999999999999999999999999999999999986 5 45899999998
Q ss_pred cCCcccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHH
Q 000808 755 PKKQETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQ 834 (1275)
Q Consensus 755 ~~~~~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGe 834 (1275)
+......++.++|++|++.+++.+|++||+.+...+. .|||||
T Consensus 74 ~~~~~~~~~~i~~~~q~~~~~~~~t~~~~i~~~~~~~-------------------------------------~LS~G~ 116 (194)
T cd03213 74 PLDKRSFRKIIGYVPQDDILHPTLTVRETLMFAAKLR-------------------------------------GLSGGE 116 (194)
T ss_pred eCchHhhhheEEEccCcccCCCCCcHHHHHHHHHHhc-------------------------------------cCCHHH
Confidence 8754345667999999998889999999997642110 399999
Q ss_pred HHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcEEEEEC
Q 000808 835 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVG 913 (1275)
Q Consensus 835 rqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g 913 (1275)
|||++|||||+.+|++++|||||+|||+.++..+.+.|+++.++|+|+|+++|+++.++.+.+|++++|++ |++++.|
T Consensus 117 ~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~v~~l~~-G~i~~~~ 194 (194)
T cd03213 117 RKRVSIALELVSNPSLLFLDEPTSGLDSSSALQVMSLLRRLADTGRTIICSIHQPSSEIFELFDKLLLLSQ-GRVIYFG 194 (194)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEecCchHHHHHhcCEEEEEeC-CEEEecC
Confidence 99999999999999999999999999999999999999998777999999999987567788999999986 7887754
No 221
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.8e-35 Score=329.10 Aligned_cols=215 Identities=22% Similarity=0.263 Sum_probs=175.2
Q ss_pred cEEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCC---ceEEEEEEEc
Q 000808 676 HSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGNITIS 752 (1275)
Q Consensus 676 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~---~~~~G~i~~~ 752 (1275)
..++++|++++++ .+.+|+|+||+|++||+++|+||||||||||+++|+|..+. .+.+|+|.++
T Consensus 12 ~~l~i~nl~~~~~-------------~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~ 78 (269)
T PRK14259 12 IIISLQNVTISYG-------------TFEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFD 78 (269)
T ss_pred ceEEEEeEEEEEC-------------CEEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEEC
Confidence 4689999998873 23599999999999999999999999999999999997542 1358999999
Q ss_pred CccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCc----ccccccc
Q 000808 753 GYPKKQ-----ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNP----LRQSLVG 823 (1275)
Q Consensus 753 g~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~----~~~~~~~ 823 (1275)
|.+... ...++.++|++|++.+++ .||+||+.+....+. ... ..+++++++++.+++.. ..+..
T Consensus 79 g~~i~~~~~~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~---~~~-~~~~~~~~~l~~~~l~~~l~~~~~~~-- 151 (269)
T PRK14259 79 GTDLYDPRVDPVEVRRRIGMVFQQPNPFP-KSIYENIAFGARING---YTG-DMDELVERSLRKAAVWDECKDKLNES-- 151 (269)
T ss_pred CEEcccccCCHHHHhhceEEEccCCccch-hhHHHHHhhhhhhcC---CcH-HHHHHHHHHHHHhCCcchhhhhhCCC--
Confidence 987531 234557899999998887 499999988754331 111 23445677888888742 23333
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhhee
Q 000808 824 LPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLM 903 (1275)
Q Consensus 824 ~~~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l 903 (1275)
...||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||++||+++ ++...+|++++|
T Consensus 152 ---~~~LS~G~~qrl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~-~~tiiivtH~~~-~~~~~~d~i~~l 226 (269)
T PRK14259 152 ---GYSLSGGQQQRLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKK-NFTIVIVTHNMQ-QAVRVSDMTAFF 226 (269)
T ss_pred ---cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCEEEEE
Confidence 357999999999999999999999999999999999999999999999854 789999999986 577899999999
Q ss_pred ec----------CcEEEEECCC
Q 000808 904 KR----------GGQEIYVGPL 915 (1275)
Q Consensus 904 ~~----------gg~~~~~g~~ 915 (1275)
++ .|++++.|++
T Consensus 227 ~~~~~~~~~~g~~g~~~~~~~~ 248 (269)
T PRK14259 227 NAEEVEGGSGGKVGYLVEFNET 248 (269)
T ss_pred eccccccccccccceEEEeCCH
Confidence 85 2678999986
No 222
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.7e-35 Score=336.24 Aligned_cols=224 Identities=17% Similarity=0.204 Sum_probs=178.8
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCC--ceEEEEEEEcCc
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--GYITGNITISGY 754 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~--~~~~G~i~~~g~ 754 (1275)
-++++|+++.+... .+.+.+|+|||++|++||+++|+|+||||||||+++|+|..+. .+.+|+|.++|.
T Consensus 3 ~L~v~~l~~~y~~~---------~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~ 73 (330)
T PRK15093 3 LLDIRNLTIEFKTS---------DGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDI 73 (330)
T ss_pred eEEEeeeEEEEeCC---------CCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCE
Confidence 37889999887421 1234699999999999999999999999999999999997642 235799999998
Q ss_pred cCCcc---c----ccceEEEeccCCC--CCCCCCHHHHHHHHHhccCCCC---CCHHHHHHHHHHHHHHcCCCccc---c
Q 000808 755 PKKQE---T----FTRISGYCEQNDI--HSPFVTVYESLLYSAWLRLPPE---VDSETQKMFIEEIMELVELNPLR---Q 819 (1275)
Q Consensus 755 ~~~~~---~----~~~~~~~v~q~~~--~~~~ltv~e~l~~~~~l~~~~~---~~~~~~~~~~~~~l~~l~l~~~~---~ 819 (1275)
++... . .++.++||+|++. +.|.+||.+++........... ....+.++++.++++.+||.+.. +
T Consensus 74 ~i~~~~~~~~~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~~~ 153 (330)
T PRK15093 74 DLLRLSPRERRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWRKRRAIELLHRVGIKDHKDAMR 153 (330)
T ss_pred ECCcCCHHHHHHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHCCCCChHHHHh
Confidence 76421 1 1346999999976 5688999999975422110000 11223456788999999997532 3
Q ss_pred ccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhh
Q 000808 820 SLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFD 898 (1275)
Q Consensus 820 ~~~~~~~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d 898 (1275)
.. +.+|||||||||+||+||+.+|++|++||||+|||+.++..+.+.|+++.++ |.|||++|||++ .+.+.+|
T Consensus 154 ~~-----p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~-~v~~~~d 227 (330)
T PRK15093 154 SF-----PYELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQ-MLSQWAD 227 (330)
T ss_pred CC-----chhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCC
Confidence 33 3579999999999999999999999999999999999999999999998764 899999999985 5668899
Q ss_pred hhheeecCcEEEEECCCC
Q 000808 899 ELFLMKRGGQEIYVGPLG 916 (1275)
Q Consensus 899 ~~~~l~~gg~~~~~g~~~ 916 (1275)
++++|.+ |+++..|+.+
T Consensus 228 ri~vm~~-G~ive~g~~~ 244 (330)
T PRK15093 228 KINVLYC-GQTVETAPSK 244 (330)
T ss_pred EEEEEEC-CEEEEECCHH
Confidence 9999985 8999999863
No 223
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.4e-35 Score=323.08 Aligned_cols=211 Identities=24% Similarity=0.305 Sum_probs=175.9
Q ss_pred EEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCC
Q 000808 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1275)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 757 (1275)
++++|++++++ ++ ..|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~--~~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 64 (232)
T PRK10771 2 LKLTDITWLYH-------------HL--PMRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLT--PASGSLTLNGQDHT 64 (232)
T ss_pred eEEEEEEEEEC-------------Cc--cceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCeecC
Confidence 56889988873 11 238999999999999999999999999999999865 34799999998764
Q ss_pred cc-cccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHH
Q 000808 758 QE-TFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRK 836 (1275)
Q Consensus 758 ~~-~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerq 836 (1275)
.. ..++.++|++|++.+++.+|+.||+.+...... .. .+..+++++++++.+|+.+..++.+ ..|||||||
T Consensus 65 ~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~--~~-~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 136 (232)
T PRK10771 65 TTPPSRRPVSMLFQENNLFSHLTVAQNIGLGLNPGL--KL-NAAQREKLHAIARQMGIEDLLARLP-----GQLSGGQRQ 136 (232)
T ss_pred cCChhhccEEEEecccccccCCcHHHHHhccccccc--CC-CHHHHHHHHHHHHHcCcHHHHhCCc-----ccCCHHHHH
Confidence 31 124568999999999999999999976532111 11 1234556889999999988777776 469999999
Q ss_pred HHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhhhhheeecCcEEEEECCC
Q 000808 837 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVGPL 915 (1275)
Q Consensus 837 rv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 915 (1275)
|++|||+|+.+|++++|||||+|||+.++..+.+.|+++.++ |+|||+++|++. ++.+.+|++++|.+ |++++.|+.
T Consensus 137 rv~laral~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-g~i~~~g~~ 214 (232)
T PRK10771 137 RVALARCLVREQPILLLDEPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSLE-DAARIAPRSLVVAD-GRIAWDGPT 214 (232)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 999999999999999999999999999999999999998764 899999999986 56778999999986 799999876
No 224
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.3e-35 Score=316.17 Aligned_cols=193 Identities=27% Similarity=0.411 Sum_probs=159.1
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCccccceEEEeccc---cccCCCCCHHHHHHHHHhccCC
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFVPQRTAAYISQH---DVHIGEMTVRETLAFSARCQGV 77 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~~~~~~~~yv~Q~---~~~~~~lTv~e~l~f~~~~~~~ 77 (1275)
+++|+||||||||||+|+|+|.++|. +|+|.+.|.+......+..+|||||. |+-|| .||+|-+..+..-+.
T Consensus 32 ~~~iiGPNGaGKSTLlK~iLGll~p~---~G~i~~~g~~~~~~~~~~~IgYVPQ~~~~d~~fP-~tV~d~V~~g~~~~~- 106 (254)
T COG1121 32 ITALIGPNGAGKSTLLKAILGLLKPS---SGEIKIFGKPVRKRRKRLRIGYVPQKSSVDRSFP-ITVKDVVLLGRYGKK- 106 (254)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCcCC---cceEEEccccccccccCCeEEEcCcccccCCCCC-cCHHHHHHccCcccc-
Confidence 58999999999999999999999987 99999999887766556789999994 44444 699999998632110
Q ss_pred CCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhhHHH
Q 000808 78 GSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGE 157 (1275)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~ 157 (1275)
.......+ +....+++.|+.+|+.+..|..+| .|||||+|||-|||
T Consensus 107 ----g~~~~~~~-------------------------~d~~~v~~aL~~Vgm~~~~~r~i~-----~LSGGQ~QRV~lAR 152 (254)
T COG1121 107 ----GWFRRLNK-------------------------KDKEKVDEALERVGMEDLRDRQIG-----ELSGGQKQRVLLAR 152 (254)
T ss_pred ----cccccccH-------------------------HHHHHHHHHHHHcCchhhhCCccc-----ccCcHHHHHHHHHH
Confidence 00000000 112357888999999988887776 59999999999999
Q ss_pred HHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhhHHH
Q 000808 158 MMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVLD 235 (1275)
Q Consensus 158 al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~~~~ 235 (1275)
||+++|++|+|||||+|+|+.++..+.+.|+++.+. +.+|++++|+...+.++||+|+.| ++++.+.|+++++.+
T Consensus 153 AL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~e--g~tIl~vtHDL~~v~~~~D~vi~L-n~~~~~~G~~~~~~~ 227 (254)
T COG1121 153 ALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQE--GKTVLMVTHDLGLVMAYFDRVICL-NRHLIASGPPEEVLT 227 (254)
T ss_pred HhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHC--CCEEEEEeCCcHHhHhhCCEEEEE-cCeeEeccChhhccC
Confidence 999999999999999999999999999999998664 666777999999999999999999 557899999988753
No 225
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9e-35 Score=324.81 Aligned_cols=221 Identities=21% Similarity=0.286 Sum_probs=178.1
Q ss_pred cEEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCC--Cc-eEEEEEEEc
Q 000808 676 HSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--GG-YITGNITIS 752 (1275)
Q Consensus 676 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~--~~-~~~G~i~~~ 752 (1275)
..++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|..+ +. +.+|+|.++
T Consensus 3 ~~l~~~nl~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~ 69 (252)
T PRK14256 3 NKVKLEQLNVHFG-------------KNHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLD 69 (252)
T ss_pred cEEEEEEEEEEeC-------------CeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEEC
Confidence 3588999998873 2359999999999999999999999999999999999753 21 247999999
Q ss_pred CccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCC
Q 000808 753 GYPKKQ-----ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGE 827 (1275)
Q Consensus 753 g~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~ 827 (1275)
|.++.. ..+++.++|++|++.+++.+|++||+.+...... ..+..+.+++++++++.+++.+....... ...
T Consensus 70 g~~i~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~ 146 (252)
T PRK14256 70 DTDIYDRGVDPVSIRRRVGMVFQKPNPFPAMSIYDNVIAGYKLNG--RVNRSEADEIVESSLKRVALWDEVKDRLK-SNA 146 (252)
T ss_pred CEEcccccCChHHhhccEEEEecCCCCCCcCcHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhhHHhh-CCc
Confidence 987632 2346679999999999999999999987543221 12233344567889999998642111111 123
Q ss_pred CCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCc
Q 000808 828 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGG 907 (1275)
Q Consensus 828 ~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg 907 (1275)
..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|+++ ++.+.+|++++|.+ |
T Consensus 147 ~~LS~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~~~~~~d~i~~l~~-G 223 (252)
T PRK14256 147 MELSGGQQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKE-KYTIIIVTHNMQ-QAARVSDYTAFFYM-G 223 (252)
T ss_pred CcCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh-CCcEEEEECCHH-HHHhhCCEEEEEEC-C
Confidence 57999999999999999999999999999999999999999999999875 689999999975 56688999999985 7
Q ss_pred EEEEECCC
Q 000808 908 QEIYVGPL 915 (1275)
Q Consensus 908 ~~~~~g~~ 915 (1275)
+++..|+.
T Consensus 224 ~i~~~~~~ 231 (252)
T PRK14256 224 DLVECGET 231 (252)
T ss_pred EEEEeCCH
Confidence 99999986
No 226
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9e-35 Score=333.40 Aligned_cols=222 Identities=18% Similarity=0.239 Sum_probs=179.1
Q ss_pred cEEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCC---ceEEEEEEEc
Q 000808 676 HSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGNITIS 752 (1275)
Q Consensus 676 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~---~~~~G~i~~~ 752 (1275)
..++++|+++++.. +.+.+|+|+|++|++||++||+||||||||||+++|+|.... .+.+|+|.+|
T Consensus 79 ~~i~~~nls~~y~~-----------~~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~id 147 (329)
T PRK14257 79 NVFEIRNFNFWYMN-----------RTKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFL 147 (329)
T ss_pred ceEEEEeeEEEecC-----------CCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEEC
Confidence 46999999988741 124599999999999999999999999999999999997531 2347999999
Q ss_pred CccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCC-HHHHHHHHHHHHHHcCCCccccccccCCC
Q 000808 753 GYPKKQ-----ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVD-SETQKMFIEEIMELVELNPLRQSLVGLPG 826 (1275)
Q Consensus 753 g~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~-~~~~~~~~~~~l~~l~l~~~~~~~~~~~~ 826 (1275)
|.++.. ...++.++|++|++.+++ .|++||+.|..... ..+ .+..++.++++++.++|.+..++.++. .
T Consensus 148 G~~i~~~~~~~~~lr~~i~~v~q~~~~~~-~ti~eNi~~~~~~~---~~~~~~~~~~~~~~~l~~~~L~~~l~~~~~~-~ 222 (329)
T PRK14257 148 GTNTRSKKISSLELRTRIGMVFQKPTPFE-MSIFDNVAYGPRNN---GINDRKILEKIVEKSLKSAALWDEVKDDLDK-A 222 (329)
T ss_pred CEEccccccchHhhhccEEEEecCCccCC-CcHHHHHHhHHHhc---CCChHHHHHHHHHHHHHHcCCcchhhhhhhC-C
Confidence 998742 234667999999998875 79999999864321 122 222334567888888875433333332 2
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecC
Q 000808 827 ESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRG 906 (1275)
Q Consensus 827 ~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~g 906 (1275)
...||||||||++|||||+.+|+||+|||||+|||+.+...+.+.|+++++ ++|||+++|+++ .+.+.+|++++|++
T Consensus 223 ~~~LSgGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~-~~Tii~iTH~l~-~i~~~~Driivl~~- 299 (329)
T PRK14257 223 GNALSGGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKK-KYSIIIVTHSMA-QAQRISDETVFFYQ- 299 (329)
T ss_pred cccCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEEEEEC-
Confidence 457999999999999999999999999999999999999999999999875 699999999975 46677999999986
Q ss_pred cEEEEECCCC
Q 000808 907 GQEIYVGPLG 916 (1275)
Q Consensus 907 g~~~~~g~~~ 916 (1275)
|+++..|++.
T Consensus 300 G~i~e~g~~~ 309 (329)
T PRK14257 300 GWIEEAGETK 309 (329)
T ss_pred CEEEEeCCHH
Confidence 7999999873
No 227
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.8e-35 Score=340.15 Aligned_cols=191 Identities=24% Similarity=0.380 Sum_probs=167.1
Q ss_pred ceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCCc-------ccccceEEEeccCCCCCCCCCH
Q 000808 708 GVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ-------ETFTRISGYCEQNDIHSPFVTV 780 (1275)
Q Consensus 708 ~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~-------~~~~~~~~~v~q~~~~~~~ltv 780 (1275)
|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+... ...++.++|++|+..+++.+||
T Consensus 16 ~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~--p~~G~I~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv 93 (352)
T PRK11144 16 TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTR--PQKGRIVLNGRVLFDAEKGICLPPEKRRIGYVFQDARLFPHYKV 93 (352)
T ss_pred EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEccccccccccchhhCCEEEEcCCcccCCCCcH
Confidence 8999999999999999999999999999999865 348999999987532 1235679999999999999999
Q ss_pred HHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCC
Q 000808 781 YESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 860 (1275)
Q Consensus 781 ~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgL 860 (1275)
+||+.|... ...+++++++++.+||.+..+..+ ..||||||||++|||||+.+|++|+|||||+||
T Consensus 94 ~enl~~~~~---------~~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgGq~qRvalaraL~~~p~llLLDEPts~L 159 (352)
T PRK11144 94 RGNLRYGMA---------KSMVAQFDKIVALLGIEPLLDRYP-----GSLSGGEKQRVAIGRALLTAPELLLMDEPLASL 159 (352)
T ss_pred HHHHHhhhh---------hhhHHHHHHHHHHcCCchhhhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEcCCcccC
Confidence 999987532 112346789999999988777765 479999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhhhhheeecCcEEEEECCCC
Q 000808 861 DARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVGPLG 916 (1275)
Q Consensus 861 D~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~~ 916 (1275)
|+.++..+.+.|+++.++ |+|+|++||+++ ++..++|++++|++ |+++..|++.
T Consensus 160 D~~~~~~l~~~L~~l~~~~g~tii~vTHd~~-~~~~~~d~i~~l~~-G~i~~~g~~~ 214 (352)
T PRK11144 160 DLPRKRELLPYLERLAREINIPILYVSHSLD-EILRLADRVVVLEQ-GKVKAFGPLE 214 (352)
T ss_pred CHHHHHHHHHHHHHHHHhcCCeEEEEecCHH-HHHHhCCEEEEEeC-CEEEEecCHH
Confidence 999999999999998765 899999999985 67889999999986 7999999874
No 228
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=5.4e-35 Score=340.37 Aligned_cols=195 Identities=24% Similarity=0.375 Sum_probs=169.1
Q ss_pred ceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCCc-------ccccceEEEeccCCCCCCCCCH
Q 000808 708 GVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ-------ETFTRISGYCEQNDIHSPFVTV 780 (1275)
Q Consensus 708 ~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~-------~~~~~~~~~v~q~~~~~~~ltv 780 (1275)
|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+... ...++.++|++|++.+++.+||
T Consensus 15 ~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~--p~~G~I~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv 92 (354)
T TIGR02142 15 DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTR--PDEGEIVLNGRTLFDSRKGIFLPPEKRRIGYVFQEARLFPHLSV 92 (354)
T ss_pred EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECccCccccccchhhCCeEEEecCCccCCCCcH
Confidence 8999999999999999999999999999999865 348999999987532 1235679999999999999999
Q ss_pred HHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCC
Q 000808 781 YESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 860 (1275)
Q Consensus 781 ~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgL 860 (1275)
+||+.|+.... ...+.+++++++++.+||.+..++.+ ..||||||||++|||||+.+|++|+|||||+||
T Consensus 93 ~enl~~~~~~~-----~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LSgGqkqRvalAraL~~~p~lllLDEPts~L 162 (354)
T TIGR02142 93 RGNLRYGMKRA-----RPSERRISFERVIELLGIGHLLGRLP-----GRLSGGEKQRVAIGRALLSSPRLLLMDEPLAAL 162 (354)
T ss_pred HHHHHHHhhcc-----ChhHHHHHHHHHHHHcCChhHhcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCC
Confidence 99998865321 12334556889999999988877765 479999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhhhhheeecCcEEEEECCCC
Q 000808 861 DARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVGPLG 916 (1275)
Q Consensus 861 D~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~~ 916 (1275)
|+.++..+.+.|++++++ |+|||++||+++ ++...+|++++|++ |+++..|+++
T Consensus 163 D~~~~~~l~~~L~~l~~~~g~tiiivtH~~~-~~~~~~d~i~~l~~-G~i~~~g~~~ 217 (354)
T TIGR02142 163 DDPRKYEILPYLERLHAEFGIPILYVSHSLQ-EVLRLADRVVVLED-GRVAAAGPIA 217 (354)
T ss_pred CHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEeC-CEEEEECCHH
Confidence 999999999999998765 899999999986 57788999999986 7999999863
No 229
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=6.8e-35 Score=327.75 Aligned_cols=224 Identities=19% Similarity=0.248 Sum_probs=179.5
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 756 (1275)
-++++|+++++..+.. ....+.+++|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~~~~~----~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~ 77 (267)
T PRK15112 4 LLEVRNLSKTFRYRTG----WFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIE--PTSGELLIDDHPL 77 (267)
T ss_pred eEEEeceEEEecCCCC----cccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCC--CCCCEEEECCEEC
Confidence 3789999988742110 000112469999999999999999999999999999999999876 3489999999876
Q ss_pred Ccc---cccceEEEeccCCC--CCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCC-ccccccccCCCCCCC
Q 000808 757 KQE---TFTRISGYCEQNDI--HSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELN-PLRQSLVGLPGESGL 830 (1275)
Q Consensus 757 ~~~---~~~~~~~~v~q~~~--~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~~~~l 830 (1275)
... ..++.++|++|++. +++.+|+.|++.+....+. .....+..+.++++++.+|+. +..+..+ ..|
T Consensus 78 ~~~~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~L 150 (267)
T PRK15112 78 HFGDYSYRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNT--DLEPEQREKQIIETLRQVGLLPDHASYYP-----HML 150 (267)
T ss_pred CCCchhhHhccEEEEecCchhhcCcchhHHHHHHHHHHhcc--CCCHHHHHHHHHHHHHHcCCChHHHhcCc-----hhc
Confidence 421 22356899999975 5678899999987654332 122334455688999999994 5555544 479
Q ss_pred CHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhhhhheeecCcEE
Q 000808 831 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDELFLMKRGGQE 909 (1275)
Q Consensus 831 SgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~ 909 (1275)
|||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++...+|++++|++ |++
T Consensus 151 S~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~-~~~~~~d~i~~l~~-G~i 228 (267)
T PRK15112 151 APGQKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHLG-MMKHISDQVLVMHQ-GEV 228 (267)
T ss_pred CHHHHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHH-HHHHhcCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999998764 899999999985 56678999999985 789
Q ss_pred EEECCC
Q 000808 910 IYVGPL 915 (1275)
Q Consensus 910 ~~~g~~ 915 (1275)
+..|+.
T Consensus 229 ~~~~~~ 234 (267)
T PRK15112 229 VERGST 234 (267)
T ss_pred EecCCH
Confidence 888875
No 230
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-34 Score=324.79 Aligned_cols=215 Identities=27% Similarity=0.307 Sum_probs=174.9
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCC--C-ceEEEEEEEcC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYITGNITISG 753 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~--~-~~~~G~i~~~g 753 (1275)
-++++|+++++. ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ + .+.+|+|.++|
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g 71 (252)
T PRK14239 5 ILQVSDLSVYYN-------------KKKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNG 71 (252)
T ss_pred eEEEEeeEEEEC-------------CeeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECC
Confidence 478999998873 2359999999999999999999999999999999999632 2 12479999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCc----cccccccC
Q 000808 754 YPKKQ-----ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNP----LRQSLVGL 824 (1275)
Q Consensus 754 ~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~----~~~~~~~~ 824 (1275)
.+... ..+++.++|++|++.+++ .|++||+.+....+. ....+..++.++++++.+++.+ ..+..
T Consensus 72 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 145 (252)
T PRK14239 72 HNIYSPRTDTVDLRKEIGMVFQQPNPFP-MSIYENVVYGLRLKG--IKDKQVLDEAVEKSLKGASIWDEVKDRLHDS--- 145 (252)
T ss_pred EECcCcccchHhhhhcEEEEecCCccCc-CcHHHHHHHHHHHcC--CCcHHHHHHHHHHHHHHcCCchhHHHHHhcC---
Confidence 87632 123567999999998887 899999987654321 1122334456788899998753 22333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheee
Q 000808 825 PGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMK 904 (1275)
Q Consensus 825 ~~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~ 904 (1275)
...||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|+++ ++.+.+|++++|+
T Consensus 146 --~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~i~~l~ 221 (252)
T PRK14239 146 --ALGLSGGQQQRVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKD-DYTMLLVTRSMQ-QASRISDRTGFFL 221 (252)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhh-CCeEEEEECCHH-HHHHhCCEEEEEE
Confidence 357999999999999999999999999999999999999999999999865 689999999975 5778899999998
Q ss_pred cCcEEEEECCC
Q 000808 905 RGGQEIYVGPL 915 (1275)
Q Consensus 905 ~gg~~~~~g~~ 915 (1275)
+ |++++.|+.
T Consensus 222 ~-G~i~~~g~~ 231 (252)
T PRK14239 222 D-GDLIEYNDT 231 (252)
T ss_pred C-CEEEEeCCH
Confidence 6 789999986
No 231
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.7e-35 Score=317.62 Aligned_cols=191 Identities=24% Similarity=0.381 Sum_probs=162.5
Q ss_pred ceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCCc-------ccccceEEEeccCCCCCCCCCH
Q 000808 708 GVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ-------ETFTRISGYCEQNDIHSPFVTV 780 (1275)
Q Consensus 708 ~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~-------~~~~~~~~~v~q~~~~~~~ltv 780 (1275)
|+|+++++ |+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++.+++.+|+
T Consensus 16 ~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t~ 92 (214)
T cd03297 16 KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEK--PDGGTIVLNGTVLFDSRKKINLPPQQRKIGLVFQQYALFPHLNV 92 (214)
T ss_pred CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEecccccchhhhhhHhhcEEEEecCCccCCCCCH
Confidence 99999999 9999999999999999999999865 348999999987531 1234578999999999989999
Q ss_pred HHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCC
Q 000808 781 YESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 860 (1275)
Q Consensus 781 ~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgL 860 (1275)
+||+.+..... .....+++++++++.+|+.+..+..+ ..||||||||++||++|+.+|++++|||||+||
T Consensus 93 ~~~l~~~~~~~-----~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~llllDEPt~~L 162 (214)
T cd03297 93 RENLAFGLKRK-----RNREDRISVDELLDLLGLDHLLNRYP-----AQLSGGEKQRVALARALAAQPELLLLDEPFSAL 162 (214)
T ss_pred HHHHHHHHhhC-----CHHHHHHHHHHHHHHcCCHhHhhcCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccC
Confidence 99998764321 22334456788999999987666654 479999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhhhhheeecCcEEEEEC
Q 000808 861 DARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVG 913 (1275)
Q Consensus 861 D~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g 913 (1275)
|+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |+++..|
T Consensus 163 D~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g 214 (214)
T cd03297 163 DRALRLQLLPELKQIKKNLNIPVIFVTHDLS-EAEYLADRIVVMED-GRLQYIG 214 (214)
T ss_pred CHHHHHHHHHHHHHHHHHcCcEEEEEecCHH-HHHHhcCEEEEEEC-CEEEecC
Confidence 999999999999998765 899999999975 46678999999986 7887765
No 232
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.6e-35 Score=325.77 Aligned_cols=215 Identities=20% Similarity=0.267 Sum_probs=175.9
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCC--Cc-eEEEEEEEcC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--GG-YITGNITISG 753 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~--~~-~~~G~i~~~g 753 (1275)
-++++|+++.+. ++.+|+|+|++|++||+++|+||||||||||+++|+|... +. +.+|+|.++|
T Consensus 12 ~l~i~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g 78 (259)
T PRK14274 12 VYQINGMNLWYG-------------QHHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNG 78 (259)
T ss_pred eEEEeeEEEEEC-------------CeeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECC
Confidence 488999998763 2359999999999999999999999999999999999753 11 1479999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCcc----ccccccC
Q 000808 754 YPKKQ-----ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPL----RQSLVGL 824 (1275)
Q Consensus 754 ~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~----~~~~~~~ 824 (1275)
.+... ...++.++|++|++.+++. |++||+.+...... ....++.+++++++++.+++.+. .+..
T Consensus 79 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~l~~~--- 152 (259)
T PRK14274 79 SNILKGKVDLVELRKNIGMVFQKGNPFPQ-SIFDNVAYGPRIHG--TKNKKKLQEIVEKSLKDVALWDEVKDRLHTQ--- 152 (259)
T ss_pred EEccccccCHHHHhhceEEEecCCccccc-CHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhhhhhhCC---
Confidence 87632 1335678999999888875 99999987643321 11233445567888999998542 2333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheee
Q 000808 825 PGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMK 904 (1275)
Q Consensus 825 ~~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~ 904 (1275)
.++||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++.+ ++|||+++|+++ .+.+.+|++++|+
T Consensus 153 --~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivtH~~~-~~~~~~d~i~~l~ 228 (259)
T PRK14274 153 --ALSLSGGQQQRLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKE-KYTIVIVTHNMQ-QAARVSDQTAFFY 228 (259)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEEcCHH-HHHHhCCEEEEEE
Confidence 357999999999999999999999999999999999999999999999865 799999999985 5678899999998
Q ss_pred cCcEEEEECCC
Q 000808 905 RGGQEIYVGPL 915 (1275)
Q Consensus 905 ~gg~~~~~g~~ 915 (1275)
+ |+++..|++
T Consensus 229 ~-G~i~~~g~~ 238 (259)
T PRK14274 229 M-GELVECNDT 238 (259)
T ss_pred C-CEEEEECCH
Confidence 5 799999986
No 233
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=9.8e-36 Score=337.28 Aligned_cols=212 Identities=25% Similarity=0.373 Sum_probs=179.2
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 756 (1275)
.++++|++++|+.+ ..++|+|+|+++++||++||+|+||||||||++.|.|..+ +.+|+|.+||.++
T Consensus 336 ~l~~~~vsF~y~~~-----------~~~~L~~~~l~l~~GEkvAIlG~SGsGKSTllqLl~~~~~--~~~G~i~~~g~~~ 402 (573)
T COG4987 336 ALELRNVSFTYPGQ-----------QTKALKNFNLTLAQGEKVAILGRSGSGKSTLLQLLAGAWD--PQQGSITLNGVEI 402 (573)
T ss_pred eeeeccceeecCCC-----------ccchhhccceeecCCCeEEEECCCCCCHHHHHHHHHhccC--CCCCeeeECCcCh
Confidence 79999999998632 2469999999999999999999999999999999999765 3589999999886
Q ss_pred Cc---ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccc-------cccCCC
Q 000808 757 KQ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQS-------LVGLPG 826 (1275)
Q Consensus 757 ~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~-------~~~~~~ 826 (1275)
.. ...++.+++++|...+|. -|+++||..+. ++.+ ++.+.++++.+||.+.... .+|. +
T Consensus 403 ~~l~~~~~~e~i~vl~Qr~hlF~-~Tlr~NL~lA~-----~~As----DEel~~aL~qvgL~~l~~~~p~gl~t~lge-~ 471 (573)
T COG4987 403 ASLDEQALRETISVLTQRVHLFS-GTLRDNLRLAN-----PDAS----DEELWAALQQVGLEKLLESAPDGLNTWLGE-G 471 (573)
T ss_pred hhCChhhHHHHHhhhccchHHHH-HHHHHHHhhcC-----CCCC----HHHHHHHHHHcCHHHHHHhChhhhhchhcc-C
Confidence 43 335667899999987775 59999997652 2233 3447889999999876543 4443 4
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecC
Q 000808 827 ESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRG 906 (1275)
Q Consensus 827 ~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~g 906 (1275)
++.||||||||++|||+|++|.++++|||||.|||+.+.+++++.+.+.++ |+|+|++||+.. -.+.||+|++|++
T Consensus 472 G~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~~-~kTll~vTHrL~--~le~~drIivl~~- 547 (573)
T COG4987 472 GRRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHAE-GKTLLMVTHRLR--GLERMDRIIVLDN- 547 (573)
T ss_pred CCcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHhc-CCeEEEEecccc--cHhhcCEEEEEEC-
Confidence 568999999999999999999999999999999999999999999988765 899999999976 4688999999996
Q ss_pred cEEEEECCCC
Q 000808 907 GQEIYVGPLG 916 (1275)
Q Consensus 907 g~~~~~g~~~ 916 (1275)
|+++..|...
T Consensus 548 Gkiie~G~~~ 557 (573)
T COG4987 548 GKIIEEGTHA 557 (573)
T ss_pred CeeeecCCHH
Confidence 7999999874
No 234
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-34 Score=324.85 Aligned_cols=217 Identities=22% Similarity=0.289 Sum_probs=177.4
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCc-e--EEEEEEEcC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-Y--ITGNITISG 753 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~-~--~~G~i~~~g 753 (1275)
.++++|+++.+. ++.+|+|+|+++++||+++|+|+||||||||+++|+|..+.. + .+|+|.++|
T Consensus 7 ~l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g 73 (259)
T PRK14260 7 AIKVKDLSFYYN-------------TSKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFG 73 (259)
T ss_pred eEEEEEEEEEEC-------------CeEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECC
Confidence 588999998773 235999999999999999999999999999999999975421 2 479999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCc----cccccccC
Q 000808 754 YPKKQ-----ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNP----LRQSLVGL 824 (1275)
Q Consensus 754 ~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~----~~~~~~~~ 824 (1275)
.++.. ...++.++|++|++.+++ .|++||+.+....+. .....+.+++++++++.+++.+ ..+..
T Consensus 74 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 147 (259)
T PRK14260 74 QNIYDPRININRLRRQIGMVFQRPNPFP-MSIYENVAYGVRISA--KLPQADLDEIVESALKGAALWQEVKDKLNKS--- 147 (259)
T ss_pred EeccccccchHhhhhheEEEecccccCC-ccHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCcchhhhHhcCC---
Confidence 87532 123457899999998887 899999987654331 1122334456788899998842 33333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheee
Q 000808 825 PGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMK 904 (1275)
Q Consensus 825 ~~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~ 904 (1275)
...||||||||++|||||+.+|++++|||||+|||+.++..+.+.|+++++ ++|||++||+++ ++.+.+|++++|+
T Consensus 148 --~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~i~~~~d~i~~l~ 223 (259)
T PRK14260 148 --ALGLSGGQQQRLCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRS-ELTIAIVTHNMQ-QATRVSDFTAFFS 223 (259)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCeEEEEe
Confidence 357999999999999999999999999999999999999999999999865 699999999986 5778899999997
Q ss_pred c----CcEEEEECCCC
Q 000808 905 R----GGQEIYVGPLG 916 (1275)
Q Consensus 905 ~----gg~~~~~g~~~ 916 (1275)
+ .|+++..|++.
T Consensus 224 ~~~~~~G~i~~~~~~~ 239 (259)
T PRK14260 224 TDESRIGQMVEFGVTT 239 (259)
T ss_pred ccCCCCceEEEeCCHH
Confidence 3 48999999863
No 235
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-34 Score=323.82 Aligned_cols=219 Identities=19% Similarity=0.258 Sum_probs=174.0
Q ss_pred EEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCC--Cc-eEEEEEEEcCc
Q 000808 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--GG-YITGNITISGY 754 (1275)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~--~~-~~~G~i~~~g~ 754 (1275)
-+++|+++.++ ++.+|+|+||++++||+++|+||||||||||+++|+|... +. +.+|+|.++|.
T Consensus 6 ~~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~ 72 (251)
T PRK14244 6 ASVKNLNLWYG-------------SKQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGI 72 (251)
T ss_pred EEeeeEEEEEC-------------CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCE
Confidence 45778887663 2469999999999999999999999999999999999753 11 25799999998
Q ss_pred cCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCC
Q 000808 755 PKKQ-----ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESG 829 (1275)
Q Consensus 755 ~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~ 829 (1275)
++.. ...++.++|++|++.+++. |++||+.+....+. ........++.++++++.+|+.+....... .....
T Consensus 73 ~i~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~~ni~~~~~~~~-~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~~ 149 (251)
T PRK14244 73 DVYSVDTNVVLLRAKVGMVFQKPNPFPK-SIYDNVAYGPKLHG-LAKNKKKLDEIVEKSLTSVGLWEELGDRLK-DSAFE 149 (251)
T ss_pred ehHhcccchHHHhhhEEEEecCcccccC-CHHHHHHHHHHhcC-CCCCHHHHHHHHHHHHHHcCCCchhhhHhh-cChhh
Confidence 7532 1245678999999888875 99999987643321 111223344567889999998652111111 11357
Q ss_pred CCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcEE
Q 000808 830 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQE 909 (1275)
Q Consensus 830 lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~ 909 (1275)
||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++. +|+|||+++|+++ ++.+.+|++++|++ |++
T Consensus 150 LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~-~~~tiiiisH~~~-~~~~~~d~i~~l~~-G~i 226 (251)
T PRK14244 150 LSGGQQQRLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELK-KNFTIIVVTHSMK-QAKKVSDRVAFFQS-GRI 226 (251)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHhhcCEEEEEEC-CEE
Confidence 99999999999999999999999999999999999999999999985 4899999999986 56778999999996 789
Q ss_pred EEECCC
Q 000808 910 IYVGPL 915 (1275)
Q Consensus 910 ~~~g~~ 915 (1275)
+..|+.
T Consensus 227 ~~~~~~ 232 (251)
T PRK14244 227 VEYNTT 232 (251)
T ss_pred EEeCCH
Confidence 998875
No 236
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-34 Score=323.35 Aligned_cols=216 Identities=21% Similarity=0.241 Sum_probs=176.5
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCc---eEEEEEEEcC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITISG 753 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~---~~~G~i~~~g 753 (1275)
.++++|+++.+. ++.+|+|+|+++++||+++|+||||||||||+++|+|..++. +.+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g 70 (251)
T PRK14270 4 KMESKNLNLWYG-------------EKQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDG 70 (251)
T ss_pred EEEEEEeEEEEC-------------CeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECC
Confidence 578999988763 235999999999999999999999999999999999975421 2579999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCc----cccccccC
Q 000808 754 YPKKQ-----ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNP----LRQSLVGL 824 (1275)
Q Consensus 754 ~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~----~~~~~~~~ 824 (1275)
.+... ...++.++|++|++.+++ .|++||+.+...... ....++.+++++++++.+++.+ ..+..
T Consensus 71 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 144 (251)
T PRK14270 71 KNIYDKDVDVVELRKRVGMVFQKPNPFP-MSIYDNVAYGPRIHG--IKDKKELDKIVEWALKKAALWDEVKDDLKKS--- 144 (251)
T ss_pred EecccccccHHHHHhheEEEecCCCcCC-CcHHHHHHhHHHhcC--CCcHHHHHHHHHHHHHHcCCchhhhhHhhCC---
Confidence 87642 123566899999998887 899999987654321 1123344556788999998742 23333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheee
Q 000808 825 PGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMK 904 (1275)
Q Consensus 825 ~~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~ 904 (1275)
...||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++.+ ++|||++||+++ ++.+.+|++++|+
T Consensus 145 --~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~-~~tiiivsH~~~-~~~~~~d~v~~l~ 220 (251)
T PRK14270 145 --ALKLSGGQQQRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKK-EYTIVIVTHNMQ-QASRVSDYTAFFL 220 (251)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-CCeEEEEEcCHH-HHHHhcCEEEEEE
Confidence 357999999999999999999999999999999999999999999999876 689999999985 5678899999998
Q ss_pred cCcEEEEECCCC
Q 000808 905 RGGQEIYVGPLG 916 (1275)
Q Consensus 905 ~gg~~~~~g~~~ 916 (1275)
+ |+++..|+++
T Consensus 221 ~-G~i~~~~~~~ 231 (251)
T PRK14270 221 M-GDLIEFNKTE 231 (251)
T ss_pred C-CeEEEeCCHH
Confidence 6 7899999863
No 237
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-34 Score=322.65 Aligned_cols=215 Identities=21% Similarity=0.298 Sum_probs=175.2
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCc---eEEEEEEEcC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITISG 753 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~---~~~G~i~~~g 753 (1275)
.++++|+++.+. ++.+|+|+||+|++||+++|+||||||||||+++|+|..+.. +.+|+|.++|
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g 69 (250)
T PRK14240 3 KISVKDLDLFYG-------------DFQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDG 69 (250)
T ss_pred eEEEEEEEEEEC-------------CceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECC
Confidence 478899998773 235999999999999999999999999999999999964311 2479999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCc----cccccccC
Q 000808 754 YPKKQ-----ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNP----LRQSLVGL 824 (1275)
Q Consensus 754 ~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~----~~~~~~~~ 824 (1275)
.+... ...++.++|++|++.+++ .|++||+.+....+. ....++.+++++++++.+++.+ ..+..
T Consensus 70 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~t~~~ni~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 143 (250)
T PRK14240 70 QDIYKSDIDVNQLRKRVGMVFQQPNPFP-MSIYDNVAYGPRTHG--IKDKKKLDEIVEKSLKGAALWDEVKDRLKKS--- 143 (250)
T ss_pred EEccccccchHHHhccEEEEecCCccCc-ccHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhHHHHhcC---
Confidence 87642 124567899999988887 899999988654321 1123344566788888888743 23333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheee
Q 000808 825 PGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMK 904 (1275)
Q Consensus 825 ~~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~ 904 (1275)
...||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++.+ ++|||++||+++ .+.+.+|++++|+
T Consensus 144 --~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~v~~l~ 219 (250)
T PRK14240 144 --ALGLSGGQQQRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELKK-DYTIVIVTHNMQ-QASRISDKTAFFL 219 (250)
T ss_pred --CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEEeCHH-HHHhhCCEEEEEE
Confidence 357999999999999999999999999999999999999999999999854 799999999975 5678899999998
Q ss_pred cCcEEEEECCC
Q 000808 905 RGGQEIYVGPL 915 (1275)
Q Consensus 905 ~gg~~~~~g~~ 915 (1275)
+ |+++..|+.
T Consensus 220 ~-G~i~~~~~~ 229 (250)
T PRK14240 220 N-GEIVEFGDT 229 (250)
T ss_pred C-CEEEEeCCH
Confidence 6 789998875
No 238
>COG4604 CeuD ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.2e-36 Score=297.58 Aligned_cols=207 Identities=24% Similarity=0.374 Sum_probs=179.1
Q ss_pred cccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCCc---ccccceEEEeccCCCCCCC
Q 000808 701 DKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ---ETFTRISGYCEQNDIHSPF 777 (1275)
Q Consensus 701 ~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~---~~~~~~~~~v~q~~~~~~~ 777 (1275)
+++.+|+++|..|++|.+++|+|||||||||||.+++...+ ..+|+|+++|.++.. ..+.+..+..-|+......
T Consensus 12 ~~~~vl~~isl~i~~g~iTs~IGPNGAGKSTLLS~~sRL~~--~d~G~i~i~g~~~~~~~s~~LAk~lSILkQ~N~i~~r 89 (252)
T COG4604 12 GTKVVLDDVSLDIPKGGITSIIGPNGAGKSTLLSMMSRLLK--KDSGEITIDGLELTSTPSKELAKKLSILKQENHINSR 89 (252)
T ss_pred CCEEeeccceeeecCCceeEEECCCCccHHHHHHHHHHhcc--ccCceEEEeeeecccCChHHHHHHHHHHHhhchhhhe
Confidence 45689999999999999999999999999999999998765 348999999998753 3345667888899888889
Q ss_pred CCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCC
Q 000808 778 VTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPT 857 (1275)
Q Consensus 778 ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~~l~~~p~illlDEPt 857 (1275)
+||+|-+.|+..-. ......++.+..++++++.++|++..|+.. .+||||||||.-||+.++++.+.++||||.
T Consensus 90 lTV~dLv~FGRfPY-SqGRlt~eD~~~I~~aieyl~L~~l~dryL-----d~LSGGQrQRAfIAMVlaQdTdyvlLDEPL 163 (252)
T COG4604 90 LTVRDLVGFGRFPY-SQGRLTKEDRRIINEAIEYLHLEDLSDRYL-----DELSGGQRQRAFIAMVLAQDTDYVLLDEPL 163 (252)
T ss_pred eEHHHHhhcCCCcc-cCCCCchHHHHHHHHHHHHhcccchHHHhH-----HhcccchhhhhhhheeeeccCcEEEecCcc
Confidence 99999999873211 122334556678999999999999999987 479999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhhhhheeecCcEEEEECCCCc
Q 000808 858 SGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVGPLGR 917 (1275)
Q Consensus 858 sgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~~~ 917 (1275)
++||...+..+|+.|++++++ |+||+++.||.+. .-.+.|+|+-|++ |+++..|++++
T Consensus 164 NNLDmkHsv~iMk~Lrrla~el~KtiviVlHDINf-AS~YsD~IVAlK~-G~vv~~G~~~e 222 (252)
T COG4604 164 NNLDMKHSVQIMKILRRLADELGKTIVVVLHDINF-ASCYSDHIVALKN-GKVVKQGSPDE 222 (252)
T ss_pred cccchHHHHHHHHHHHHHHHHhCCeEEEEEecccH-HHhhhhheeeecC-CEEEecCCHHH
Confidence 999999999999999999876 9999999999874 4567899999996 79999999864
No 239
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=8.9e-35 Score=356.67 Aligned_cols=220 Identities=25% Similarity=0.320 Sum_probs=184.4
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 756 (1275)
-++++|++++++ ++.+|+|+||++++||+++|+||||||||||||+|+|..++ .+|+|.++|.+.
T Consensus 4 ~i~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p--~~G~i~~~g~~~ 68 (501)
T PRK10762 4 LLQLKGIDKAFP-------------GVKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTR--DAGSILYLGKEV 68 (501)
T ss_pred eEEEeeeEEEeC-------------CeEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEEC
Confidence 378899998773 24699999999999999999999999999999999998653 489999999876
Q ss_pred Ccc----cccceEEEeccCCCCCCCCCHHHHHHHHHhccCC-CCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCC
Q 000808 757 KQE----TFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLP-PEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLS 831 (1275)
Q Consensus 757 ~~~----~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~-~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lS 831 (1275)
... ..++.++|++|++.+++.+||+|++.++...+.. ...+..+.+++++++++.+|+.+..+..+ ..||
T Consensus 69 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 143 (501)
T PRK10762 69 TFNGPKSSQEAGIGIIHQELNLIPQLTIAENIFLGREFVNRFGRIDWKKMYAEADKLLARLNLRFSSDKLV-----GELS 143 (501)
T ss_pred CCCCHHHHHhCCEEEEEcchhccCCCcHHHHhhhccccccccCccCHHHHHHHHHHHHHHcCCCCCccCch-----hhCC
Confidence 321 1245689999999899999999999886432211 11223334556889999999988777766 3699
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcEEEE
Q 000808 832 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQEIY 911 (1275)
Q Consensus 832 gGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~ 911 (1275)
||||||++||+||+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|++++|.+ |+++.
T Consensus 144 gG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd~~-~~~~~~d~i~~l~~-G~i~~ 221 (501)
T PRK10762 144 IGEQQMVEIAKVLSFESKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHRLK-EIFEICDDVTVFRD-GQFIA 221 (501)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEE
Confidence 99999999999999999999999999999999999999999999777899999999986 57788999999986 79999
Q ss_pred ECCCCcc
Q 000808 912 VGPLGRH 918 (1275)
Q Consensus 912 ~g~~~~~ 918 (1275)
.|+..+.
T Consensus 222 ~~~~~~~ 228 (501)
T PRK10762 222 EREVADL 228 (501)
T ss_pred ecCcCcC
Confidence 9988654
No 240
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-34 Score=321.64 Aligned_cols=215 Identities=23% Similarity=0.321 Sum_probs=175.6
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCc---eEEEEEEEcC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITISG 753 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~---~~~G~i~~~g 753 (1275)
-++++|+++.+. ++.+|+|+||++++||+++|+||||||||||+++|+|...+. +.+|+|.++|
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g 69 (250)
T PRK14262 3 IIEIENFSAYYG-------------EKKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKG 69 (250)
T ss_pred eEEEEeeEEEeC-------------CceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECC
Confidence 378899988763 235999999999999999999999999999999999975421 2579999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCcc----ccccccC
Q 000808 754 YPKKQ-----ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPL----RQSLVGL 824 (1275)
Q Consensus 754 ~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~----~~~~~~~ 824 (1275)
.+... ...++.++|++|++.+++ .|++||+.+...... ....+..++.++++++.+++.+. .+..
T Consensus 70 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 143 (250)
T PRK14262 70 QDIYDPQLDVTEYRKKVGMVFQKPTPFP-MSIYDNVAFGPRIHG--VKSKHKLDRIVEESLKKAALWDEVKSELNKP--- 143 (250)
T ss_pred EEcccchhhHHHhhhhEEEEecCCccCc-ccHHHHHHHHHHHcC--CCcHHHHHHHHHHHHHHcCCCchhHHHHhCC---
Confidence 87542 123567999999998887 899999987654321 11223344567888999988542 3333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheee
Q 000808 825 PGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMK 904 (1275)
Q Consensus 825 ~~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~ 904 (1275)
..+||||||||++|||||+.+|++++|||||+|||+.++..+.+.|+++.+ ++|||++||+++ .+.+.+|++++|+
T Consensus 144 --~~~LS~Gq~qr~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tili~sH~~~-~~~~~~d~i~~l~ 219 (250)
T PRK14262 144 --GTRLSGGQQQRLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSE-NYTIVIVTHNIG-QAIRIADYIAFMY 219 (250)
T ss_pred --hhhcCHHHHHHHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhc-CcEEEEEeCCHH-HHHHhCCEEEEEE
Confidence 357999999999999999999999999999999999999999999999865 799999999975 4778899999998
Q ss_pred cCcEEEEECCC
Q 000808 905 RGGQEIYVGPL 915 (1275)
Q Consensus 905 ~gg~~~~~g~~ 915 (1275)
+ |+++..|++
T Consensus 220 ~-G~i~~~g~~ 229 (250)
T PRK14262 220 R-GELIEYGPT 229 (250)
T ss_pred C-CEEEEecCH
Confidence 6 789998876
No 241
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-34 Score=326.59 Aligned_cols=217 Identities=23% Similarity=0.293 Sum_probs=180.4
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 756 (1275)
-++++|++++++.. ..+.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 4 ~l~~~~l~~~~~~~----------~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~i 71 (277)
T PRK13642 4 ILEVENLVFKYEKE----------SDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFE--EFEGKVKIDGELL 71 (277)
T ss_pred eEEEEEEEEEcCCC----------CcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCCCEEEECCEEC
Confidence 47899999887410 12359999999999999999999999999999999999876 3589999999876
Q ss_pred Cc---ccccceEEEeccCCC-CCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCH
Q 000808 757 KQ---ETFTRISGYCEQNDI-HSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLST 832 (1275)
Q Consensus 757 ~~---~~~~~~~~~v~q~~~-~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSg 832 (1275)
.. ...++.+||++|++. .++..||.||+.+..... ....++..++++++++.+||.+..++.+ ..|||
T Consensus 72 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~ 143 (277)
T PRK13642 72 TAENVWNLRRKIGMVFQNPDNQFVGATVEDDVAFGMENQ---GIPREEMIKRVDEALLAVNMLDFKTREP-----ARLSG 143 (277)
T ss_pred CcCCHHHHhcceEEEEECHHHhhccCCHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHhHhhCCc-----ccCCH
Confidence 43 234567999999974 567789999998764322 1233444567889999999988777654 47999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhhhhheeecCcEEEE
Q 000808 833 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDELFLMKRGGQEIY 911 (1275)
Q Consensus 833 Gerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~ 911 (1275)
|||||++|||+|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||++||+++. + ..+|++++|++ |+++.
T Consensus 144 G~~qrv~lAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~-~-~~~d~i~~l~~-G~i~~ 220 (277)
T PRK13642 144 GQKQRVAVAGIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDE-A-ASSDRILVMKA-GEIIK 220 (277)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHH-H-HhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999998775 8999999999863 4 46999999996 78999
Q ss_pred ECCCC
Q 000808 912 VGPLG 916 (1275)
Q Consensus 912 ~g~~~ 916 (1275)
.|+++
T Consensus 221 ~g~~~ 225 (277)
T PRK13642 221 EAAPS 225 (277)
T ss_pred eCCHH
Confidence 99863
No 242
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=100.00 E-value=8.8e-35 Score=320.01 Aligned_cols=201 Identities=24% Similarity=0.310 Sum_probs=166.3
Q ss_pred eeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCc--eEEEEEEEcCccCCcccc-cceEEEeccCCC--CCCCCC
Q 000808 705 LLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG--YITGNITISGYPKKQETF-TRISGYCEQNDI--HSPFVT 779 (1275)
Q Consensus 705 iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~--~~~G~i~~~g~~~~~~~~-~~~~~~v~q~~~--~~~~lt 779 (1275)
+|+|+|+++++||+++|+||||||||||+++|+|..++. +.+|+|.++|.+...... ++.++|++|++. +.+.+|
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~~~t 80 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQTSGEILLDGRPLLPLSIRGRHIATIMQNPRTAFNPLFT 80 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCccccEEEECCEechhhhhhhheeEEEecCchhhcCcccC
Confidence 578999999999999999999999999999999986530 158999999987653222 357899999984 556789
Q ss_pred HHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCC---ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCC
Q 000808 780 VYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELN---PLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEP 856 (1275)
Q Consensus 780 v~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~---~~~~~~~~~~~~~~lSgGerqrv~ia~~l~~~p~illlDEP 856 (1275)
+.|++.+...... ...+..+++++++++.+++. +..+..+ ..|||||||||+|||+|+.+|++|+||||
T Consensus 81 ~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~-----~~LS~G~~qrv~laral~~~p~vllLDEP 152 (230)
T TIGR02770 81 MGNHAIETLRSLG---KLSKQARALILEALEAVGLPDPEEVLKKYP-----FQLSGGMLQRVMIALALLLEPPFLIADEP 152 (230)
T ss_pred HHHHHHHHHHHcC---ccHHHHHHHHHHHHHHcCCCchHHHHhCCh-----hhcCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 9999977543221 11233456688999999997 3444444 46999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhhhhheeecCcEEEEECCC
Q 000808 857 TSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVGPL 915 (1275)
Q Consensus 857 tsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 915 (1275)
|+|||+.+...+.+.|++++++ |+|||+++|+++ ++...+|++++|++ |+++..|++
T Consensus 153 t~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 210 (230)
T TIGR02770 153 TTDLDVVNQARVLKLLRELRQLFGTGILLITHDLG-VVARIADEVAVMDD-GRIVERGTV 210 (230)
T ss_pred ccccCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 9999999999999999998764 899999999986 56778999999986 799998876
No 243
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=1.5e-34 Score=323.90 Aligned_cols=215 Identities=25% Similarity=0.269 Sum_probs=174.9
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCcc-
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP- 755 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~- 755 (1275)
.++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+
T Consensus 6 ~l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~ 70 (258)
T PRK11701 6 LLSVRGLTKLYG-------------PRKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLA--PDAGEVHYRMRDG 70 (258)
T ss_pred eEEEeeeEEEcC-------------CceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCccc
Confidence 488999998763 2359999999999999999999999999999999999865 347999999986
Q ss_pred ----CCcc---c----ccceEEEeccCCC--CCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCc-ccccc
Q 000808 756 ----KKQE---T----FTRISGYCEQNDI--HSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNP-LRQSL 821 (1275)
Q Consensus 756 ----~~~~---~----~~~~~~~v~q~~~--~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~-~~~~~ 821 (1275)
+... . .++.++|++|++. +.+.+|+.||+.+..... . .....+.++.+.++++.+++.+ ..++.
T Consensus 71 ~~~~i~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~-~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~ 148 (258)
T PRK11701 71 QLRDLYALSEAERRRLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMAV-G-ARHYGDIRATAGDWLERVEIDAARIDDL 148 (258)
T ss_pred cccccccCCHHHHHHHhhcceEEEeeCcccccCccccHHHHHHHHHHHh-c-cCcHHHHHHHHHHHHHHcCCChhHHhCC
Confidence 4321 1 2346899999974 567789999987643211 1 1122234556788999999964 44554
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhhhh
Q 000808 822 VGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDEL 900 (1275)
Q Consensus 822 ~~~~~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~ 900 (1275)
+ ..||||||||++|||||+.+|++|+|||||+|||+.+...+.+.|++++++ |.|||+++|+++ .+...+|++
T Consensus 149 ~-----~~LS~Gq~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~-~~~~~~d~i 222 (258)
T PRK11701 149 P-----TTFSGGMQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLA-VARLLAHRL 222 (258)
T ss_pred C-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHhcCEE
Confidence 4 479999999999999999999999999999999999999999999998764 899999999975 466689999
Q ss_pred heeecCcEEEEECCC
Q 000808 901 FLMKRGGQEIYVGPL 915 (1275)
Q Consensus 901 ~~l~~gg~~~~~g~~ 915 (1275)
++|++ |++++.|++
T Consensus 223 ~~l~~-g~i~~~~~~ 236 (258)
T PRK11701 223 LVMKQ-GRVVESGLT 236 (258)
T ss_pred EEEEC-CEEEEeCCH
Confidence 99986 799999976
No 244
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-34 Score=323.84 Aligned_cols=216 Identities=23% Similarity=0.262 Sum_probs=176.9
Q ss_pred cEEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCC---ceEEEEEEEc
Q 000808 676 HSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGNITIS 752 (1275)
Q Consensus 676 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~---~~~~G~i~~~ 752 (1275)
..++++|+++.+. ++.+|+|+||++++||+++|+||||||||||+++|+|..+. .+.+|+|.++
T Consensus 24 ~~l~~~nl~~~~~-------------~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~ 90 (272)
T PRK14236 24 TALEVRNLNLFYG-------------DKQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLD 90 (272)
T ss_pred cEEEEEEEEEEEC-------------CeeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEEC
Confidence 4689999998873 23599999999999999999999999999999999997542 1358999999
Q ss_pred CccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCc----ccccccc
Q 000808 753 GYPKKQ-----ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNP----LRQSLVG 823 (1275)
Q Consensus 753 g~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~----~~~~~~~ 823 (1275)
|.+... ...++.++|++|++.+++. |++||+.+...... ....+..++.++++++.+++.+ ..+..
T Consensus 91 g~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~-- 165 (272)
T PRK14236 91 GQNIYDKKVDVAELRRRVGMVFQRPNPFPK-SIYENVVYGLRLQG--INNRRVLDEAVERSLRGAALWDEVKDRLHEN-- 165 (272)
T ss_pred CEECcccccCHHHHhccEEEEecCCccCcc-cHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHcCCChhHHHHhhCC--
Confidence 987642 1345679999999988885 99999987654321 1122233456788899988863 22332
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhhee
Q 000808 824 LPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLM 903 (1275)
Q Consensus 824 ~~~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l 903 (1275)
...||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++++ ++|||++||+++ ++.+.+|++++|
T Consensus 166 ---~~~LS~Gq~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~-~~tiiivtH~~~-~~~~~~d~i~~l 240 (272)
T PRK14236 166 ---AFGLSGGQQQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKS-KYTIVIVTHNMQ-QAARVSDYTAFM 240 (272)
T ss_pred ---cccCCHHHHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-CCeEEEEeCCHH-HHHhhCCEEEEE
Confidence 357999999999999999999999999999999999999999999999875 789999999975 567789999999
Q ss_pred ecCcEEEEECCC
Q 000808 904 KRGGQEIYVGPL 915 (1275)
Q Consensus 904 ~~gg~~~~~g~~ 915 (1275)
++ |+++..|+.
T Consensus 241 ~~-G~i~~~g~~ 251 (272)
T PRK14236 241 YM-GKLVEYGDT 251 (272)
T ss_pred EC-CEEEecCCH
Confidence 86 799999876
No 245
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.6e-35 Score=357.51 Aligned_cols=219 Identities=26% Similarity=0.311 Sum_probs=183.1
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 756 (1275)
-++++|++++++ ++.+|+|+||++++||+++|+||||||||||+|+|+|..+ +.+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~i 69 (510)
T PRK09700 5 YISMAGIGKSFG-------------PVHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHE--PTKGTITINNINY 69 (510)
T ss_pred eEEEeeeEEEcC-------------CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcC--CCccEEEECCEEC
Confidence 488999998773 2469999999999999999999999999999999999865 3479999999876
Q ss_pred Ccc----cccceEEEeccCCCCCCCCCHHHHHHHHHhcc--C-CC-CCCHHHHHHHHHHHHHHcCCCccccccccCCCCC
Q 000808 757 KQE----TFTRISGYCEQNDIHSPFVTVYESLLYSAWLR--L-PP-EVDSETQKMFIEEIMELVELNPLRQSLVGLPGES 828 (1275)
Q Consensus 757 ~~~----~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~--~-~~-~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~ 828 (1275)
... ..++.++|++|++.+++.+||+||+.+..... . .. ..+.++.+++++++++.+|+.+..++.+ .
T Consensus 70 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~ 144 (510)
T PRK09700 70 NKLDHKLAAQLGIGIIYQELSVIDELTVLENLYIGRHLTKKVCGVNIIDWREMRVRAAMMLLRVGLKVDLDEKV-----A 144 (510)
T ss_pred CCCCHHHHHHCCeEEEeecccccCCCcHHHHhhhccccccccccccccCHHHHHHHHHHHHHHcCCCCCcccch-----h
Confidence 431 12346899999999999999999998753210 0 00 0122344567889999999988777776 4
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcE
Q 000808 829 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQ 908 (1275)
Q Consensus 829 ~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~ 908 (1275)
.|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|+++ .+...+|++++|++ |+
T Consensus 145 ~LSgG~~qrv~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsHd~~-~~~~~~d~v~~l~~-G~ 222 (510)
T PRK09700 145 NLSISHKQMLEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLA-EIRRICDRYTVMKD-GS 222 (510)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CE
Confidence 69999999999999999999999999999999999999999999999877999999999975 56678999999985 78
Q ss_pred EEEECCCCc
Q 000808 909 EIYVGPLGR 917 (1275)
Q Consensus 909 ~~~~g~~~~ 917 (1275)
+++.|++++
T Consensus 223 i~~~g~~~~ 231 (510)
T PRK09700 223 SVCSGMVSD 231 (510)
T ss_pred Eeeecchhh
Confidence 999998764
No 246
>PRK13543 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=1.6e-34 Score=313.94 Aligned_cols=201 Identities=23% Similarity=0.284 Sum_probs=171.3
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 756 (1275)
-++++|+++++. ++.+++++|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.++
T Consensus 11 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~i 75 (214)
T PRK13543 11 LLAAHALAFSRN-------------EEPVFGPLDFHVDAGEALLVQGDNGAGKTTLLRVLAGLLHV--ESGQIQIDGKTA 75 (214)
T ss_pred eEEEeeEEEecC-------------CceeeecceEEECCCCEEEEEcCCCCCHHHHHHHHhCCCCC--CCeeEEECCEEc
Confidence 588999988763 23599999999999999999999999999999999998653 479999999876
Q ss_pred CcccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHH
Q 000808 757 KQETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRK 836 (1275)
Q Consensus 757 ~~~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerq 836 (1275)
.....++.++|++|++.+++.+|+.||+.+....+. .. .++.++++++.+++.+..++.+ ..|||||||
T Consensus 76 ~~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~---~~---~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 144 (214)
T PRK13543 76 TRGDRSRFMAYLGHLPGLKADLSTLENLHFLCGLHG---RR---AKQMPGSALAIVGLAGYEDTLV-----RQLSAGQKK 144 (214)
T ss_pred cchhhhhceEEeecCcccccCCcHHHHHHHHHHhcC---Cc---HHHHHHHHHHHcCChhhccCCh-----hhCCHHHHH
Confidence 543334568999999988888999999987654321 11 2345678899999987777765 469999999
Q ss_pred HHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheee
Q 000808 837 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMK 904 (1275)
Q Consensus 837 rv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~ 904 (1275)
|++|||+++.+|++++|||||+|||+.++..+.+.|+++.++|+|||+++|+++ ++.+.+|++++++
T Consensus 145 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~~~i~~l~ 211 (214)
T PRK13543 145 RLALARLWLSPAPLWLLDEPYANLDLEGITLVNRMISAHLRGGGAALVTTHGAY-AAPPVRTRMLTLE 211 (214)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecChh-hhhhhcceEEEEe
Confidence 999999999999999999999999999999999999998878899999999986 5778899998886
No 247
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-34 Score=321.27 Aligned_cols=216 Identities=24% Similarity=0.282 Sum_probs=174.9
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCce---EEEEEEEcC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGY---ITGNITISG 753 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~---~~G~i~~~g 753 (1275)
-++++|+++.++ ++.+|+|+||+|++||+++|+||||||||||+|+|+|..++.+ .+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g 70 (252)
T PRK14272 4 LLSAQDVNIYYG-------------DKQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDG 70 (252)
T ss_pred EEEEeeeEEEEC-------------CEEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECC
Confidence 477889988763 2469999999999999999999999999999999999754322 379999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCc----cccccccC
Q 000808 754 YPKKQ-----ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNP----LRQSLVGL 824 (1275)
Q Consensus 754 ~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~----~~~~~~~~ 824 (1275)
.+... ..+++.++|++|++.+++.+|+.||+.+...... ....++..+.++++++.+++.+ ..++.
T Consensus 71 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 145 (252)
T PRK14272 71 QDIYGPRVDPVAMRRRVGMVFQKPNPFPTMSVFDNVVAGLKLAG--IRDRDHLMEVAERSLRGAALWDEVKDRLKTP--- 145 (252)
T ss_pred EEcccCccCHHHhhceeEEEeccCccCcCCCHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCcchhhhhhhcCC---
Confidence 87642 1335578999999999999999999987653221 1122333455677777777642 23333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheee
Q 000808 825 PGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMK 904 (1275)
Q Consensus 825 ~~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~ 904 (1275)
.+.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|+++ .+.+.+|++++|+
T Consensus 146 --~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~ 221 (252)
T PRK14272 146 --ATGLSGGQQQRLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKK-VTTIIIVTHNMH-QAARVSDTTSFFL 221 (252)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEeCCHH-HHHHhCCEEEEEE
Confidence 357999999999999999999999999999999999999999999999864 799999999986 5667899999998
Q ss_pred cCcEEEEECCC
Q 000808 905 RGGQEIYVGPL 915 (1275)
Q Consensus 905 ~gg~~~~~g~~ 915 (1275)
+ |++++.|++
T Consensus 222 ~-G~i~~~~~~ 231 (252)
T PRK14272 222 V-GDLVEHGPT 231 (252)
T ss_pred C-CEEEEeCCH
Confidence 6 789999886
No 248
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=2.3e-34 Score=314.67 Aligned_cols=211 Identities=23% Similarity=0.345 Sum_probs=175.2
Q ss_pred EEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCC
Q 000808 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1275)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 757 (1275)
++++|+++.+... .+.+.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~~~---------~~~~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~--~~~G~i~~~g~~~~ 70 (220)
T TIGR02982 2 ISIRNLNHYYGHG---------SLRKQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRS--VQEGSLKVLGQELY 70 (220)
T ss_pred EEEEEEEEEccCC---------CcceeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEhH
Confidence 5788888876310 112569999999999999999999999999999999999765 35899999998764
Q ss_pred cc------cccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCC
Q 000808 758 QE------TFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLS 831 (1275)
Q Consensus 758 ~~------~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lS 831 (1275)
.. ..++.++|++|++.+++.+|+.||+.+...... ....++.+++++++++.+|+.+..+..+ +.||
T Consensus 71 ~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~~n~~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS 143 (220)
T TIGR02982 71 GASEKELVQLRRNIGYIFQAHNLLGFLTARQNVQMALELQP--NLSYQEARERARAMLEAVGLGDHLDYYP-----HNLS 143 (220)
T ss_pred hcCHhHHHHHHhheEEEcCChhhcCCCCHHHHHHHHHHhcc--CCCHHHHHHHHHHHHHHcCChhhhhcCh-----hhCC
Confidence 21 235679999999999998999999988654321 1233445567889999999987777665 4799
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhh-CCCEEEEEecCCCHHHHHhhhhhheeecCcEE
Q 000808 832 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFESFDELFLMKRGGQE 909 (1275)
Q Consensus 832 gGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~ 909 (1275)
+|||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++.+ +|+|||+++|+++ ..+.+|++++|.+ |++
T Consensus 144 ~G~~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sh~~~--~~~~~d~v~~l~~-g~~ 219 (220)
T TIGR02982 144 GGQKQRVAIARALVHRPKLVLADEPTAALDSKSGRDVVELMQKLAREQGCTILIVTHDNR--ILDVADRIVHMED-GKL 219 (220)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH--HHhhCCEEEEEEC-CEE
Confidence 9999999999999999999999999999999999999999999876 4899999999975 4578999999986 554
No 249
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=3.3e-35 Score=369.01 Aligned_cols=211 Identities=24% Similarity=0.387 Sum_probs=175.4
Q ss_pred cEEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCcc
Q 000808 676 HSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 755 (1275)
Q Consensus 676 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~ 755 (1275)
..++++|+++.+. +++++|+|+|++++|||++||+||||||||||+++|+|.. + .+|+|.+||.+
T Consensus 348 ~~i~~~~vsf~~~------------~~~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p--~~G~I~i~g~~ 412 (588)
T PRK11174 348 VTIEAEDLEILSP------------DGKTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-P--YQGSLKINGIE 412 (588)
T ss_pred ceEEEEeeEEecc------------CCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-C--CCcEEEECCEe
Confidence 4699999987542 1246999999999999999999999999999999999977 4 37999999988
Q ss_pred CCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCc-------cccccccCC
Q 000808 756 KKQ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNP-------LRQSLVGLP 825 (1275)
Q Consensus 756 ~~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~-------~~~~~~~~~ 825 (1275)
... ..+++.++||+|++.++. .|++||+.++. ++.++ ++++++++..++.+ -.|+.+|..
T Consensus 413 i~~~~~~~lr~~i~~v~Q~~~LF~-~TI~eNI~~g~-----~~~~~----eei~~al~~a~l~~~i~~lp~G~dT~vge~ 482 (588)
T PRK11174 413 LRELDPESWRKHLSWVGQNPQLPH-GTLRDNVLLGN-----PDASD----EQLQQALENAWVSEFLPLLPQGLDTPIGDQ 482 (588)
T ss_pred cccCCHHHHHhheEEecCCCcCCC-cCHHHHhhcCC-----CCCCH----HHHHHHHHHhCHHHHHHhcccccccccccC
Confidence 653 456788999999998886 59999998752 12333 33566666666543 336777754
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeec
Q 000808 826 GESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKR 905 (1275)
Q Consensus 826 ~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~ 905 (1275)
..+||||||||++|||||+++|+||+||||||+||++++..+.+.|+++. +++|+|+++|+++ ..+.+|+|++|++
T Consensus 483 -G~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~-~~~TvIiItHrl~--~i~~aD~Iivl~~ 558 (588)
T PRK11174 483 -AAGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAAS-RRQTTLMVTHQLE--DLAQWDQIWVMQD 558 (588)
T ss_pred -CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHh-CCCEEEEEecChH--HHHhCCEEEEEeC
Confidence 35799999999999999999999999999999999999999999999875 4799999999984 5678999999986
Q ss_pred CcEEEEECCCC
Q 000808 906 GGQEIYVGPLG 916 (1275)
Q Consensus 906 gg~~~~~g~~~ 916 (1275)
|+++..|+.+
T Consensus 559 -G~i~e~G~~~ 568 (588)
T PRK11174 559 -GQIVQQGDYA 568 (588)
T ss_pred -CeEeecCCHH
Confidence 7999999853
No 250
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-34 Score=321.98 Aligned_cols=222 Identities=22% Similarity=0.267 Sum_probs=177.6
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCc---eEEEEEEEcC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITISG 753 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~---~~~G~i~~~g 753 (1275)
.++++|+++.+. ++.+|+|+||++++||+++|+|+||||||||+++|+|..++. ...|+|.++|
T Consensus 7 ~l~~~nl~~~~~-------------~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g 73 (261)
T PRK14258 7 AIKVNNLSFYYD-------------TQKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFN 73 (261)
T ss_pred eEEEeeEEEEeC-------------CeeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECC
Confidence 588999998873 235999999999999999999999999999999999975431 1369999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCC
Q 000808 754 YPKKQ-----ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGES 828 (1275)
Q Consensus 754 ~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~ 828 (1275)
.+... ...++.++|++|++.+++ .|+.||+.+...... .....+.++++.++++.+++.+..+...+ ....
T Consensus 74 ~~i~~~~~~~~~~~~~i~~~~q~~~l~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~ 149 (261)
T PRK14258 74 QNIYERRVNLNRLRRQVSMVHPKPNLFP-MSVYDNVAYGVKIVG--WRPKLEIDDIVESALKDADLWDEIKHKIH-KSAL 149 (261)
T ss_pred EEhhccccchHHhhccEEEEecCCccCc-ccHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHcCCcchhhhHhc-CCcc
Confidence 87521 133567899999988888 899999987643221 11223334567889999998542211111 1235
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhh-CCCEEEEEecCCCHHHHHhhhhhheeecC-
Q 000808 829 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFESFDELFLMKRG- 906 (1275)
Q Consensus 829 ~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~~~~l~~g- 906 (1275)
.||||||||++|||+|+.+|++++|||||+|||+.+...+.+.|+++++ +|+|||+++|+++ ++.+.+|++++|++|
T Consensus 150 ~LSgGq~qrv~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiiivsH~~~-~i~~~~d~i~~l~~~~ 228 (261)
T PRK14258 150 DLSGGQQQRLCIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSELTMVIVSHNLH-QVSRLSDFTAFFKGNE 228 (261)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHH-HHHHhcCEEEEEccCC
Confidence 7999999999999999999999999999999999999999999999865 4899999999985 577899999999863
Q ss_pred ---cEEEEECCCC
Q 000808 907 ---GQEIYVGPLG 916 (1275)
Q Consensus 907 ---g~~~~~g~~~ 916 (1275)
|+++++|+++
T Consensus 229 ~~~G~i~~~~~~~ 241 (261)
T PRK14258 229 NRIGQLVEFGLTK 241 (261)
T ss_pred CcCceEEEeCCHH
Confidence 7999999873
No 251
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.7e-35 Score=300.01 Aligned_cols=200 Identities=25% Similarity=0.324 Sum_probs=162.6
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCcc------ccceEEEeccccccCCCCCHHHHHHHHHhc
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV------PQRTAAYISQHDVHIGEMTVRETLAFSARC 74 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~~------~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~ 74 (1275)
+++|+|||||||||||++|.|..+|+ +|+|.+||.++.... .++.+||++|+..+.+.+||.+|++.+..-
T Consensus 32 ~VaiIG~SGaGKSTLLR~lngl~d~t---~G~i~~~g~~i~~~~~k~lr~~r~~iGmIfQ~~nLv~r~sv~~NVl~grl~ 108 (258)
T COG3638 32 MVAIIGPSGAGKSTLLRSLNGLVDPT---SGEILFNGVQITKLKGKELRKLRRDIGMIFQQFNLVPRLSVLENVLLGRLG 108 (258)
T ss_pred EEEEECCCCCcHHHHHHHHhcccCCC---cceEEecccchhccchHHHHHHHHhceeEeccCCcccccHHHHHHHhhhcc
Confidence 58999999999999999999999987 999999998875543 357899999999999999999999986532
Q ss_pred cCCCCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhh
Q 000808 75 QGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVT 154 (1275)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvs 154 (1275)
+. ..+... ..+. ..+.+..+-+.|+.+|+.+.+.++.+ +|||||+|||+
T Consensus 109 ~~-----s~~~sl------fglf---------------sk~dk~~Al~aLervgi~~~A~qra~-----~LSGGQQQRVa 157 (258)
T COG3638 109 YT-----STWRSL------FGLF---------------SKEDKAQALDALERVGILDKAYQRAS-----TLSGGQQQRVA 157 (258)
T ss_pred cc-----hHHHHH------hCCC---------------CHHHHHHHHHHHHHcCcHHHHHHHhc-----cCCcchhHHHH
Confidence 11 111100 0111 11122233456899999888776554 69999999999
Q ss_pred HHHHHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhhHH
Q 000808 155 TGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVL 234 (1275)
Q Consensus 155 iA~al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~~~ 234 (1275)
|||||+.+|+|+|-|||+++|||.+++++++.|++.+...+.| ++...|..+-+.++||||+-|++|+|+|+||++++.
T Consensus 158 IARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~T-vi~nLH~vdlA~~Y~~Riigl~~G~ivfDg~~~el~ 236 (258)
T COG3638 158 IARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGIT-VIVNLHQVDLAKKYADRIIGLKAGRIVFDGPASELT 236 (258)
T ss_pred HHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCE-EEEEechHHHHHHHHhhheEecCCcEEEeCChhhhh
Confidence 9999999999999999999999999999999999998765445 555677788999999999999999999999998875
Q ss_pred H
Q 000808 235 D 235 (1275)
Q Consensus 235 ~ 235 (1275)
+
T Consensus 237 ~ 237 (258)
T COG3638 237 D 237 (258)
T ss_pred H
Confidence 4
No 252
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=2.7e-34 Score=320.96 Aligned_cols=214 Identities=21% Similarity=0.279 Sum_probs=174.4
Q ss_pred cEEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCc--eEEEEEEEcC
Q 000808 676 HSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG--YITGNITISG 753 (1275)
Q Consensus 676 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~--~~~G~i~~~g 753 (1275)
..++++|++++++ +.+|+|+|+++++||+++|+||||||||||+++|+|..++. +.+|+|.++|
T Consensus 3 ~~l~~~~l~~~~~--------------~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g 68 (254)
T PRK10418 3 QQIELRNIALQAA--------------QPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDG 68 (254)
T ss_pred cEEEEeCeEEEec--------------cceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECC
Confidence 4688999998762 25999999999999999999999999999999999986531 1579999999
Q ss_pred ccCCcccc-cceEEEeccCCC--CCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCc---cccccccCCCC
Q 000808 754 YPKKQETF-TRISGYCEQNDI--HSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNP---LRQSLVGLPGE 827 (1275)
Q Consensus 754 ~~~~~~~~-~~~~~~v~q~~~--~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~---~~~~~~~~~~~ 827 (1275)
.++..... ++.++|++|++. +.+..|+.+++.+.+.... ... .+++++++++.+++.+ ..++.+
T Consensus 69 ~~i~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~~~~~~~~l~~~~l~~~~~~~~~~~----- 138 (254)
T PRK10418 69 KPVAPCALRGRKIATIMQNPRSAFNPLHTMHTHARETCLALG---KPA--DDATLTAALEAVGLENAARVLKLYP----- 138 (254)
T ss_pred eeccccccccceEEEEecCCccccCccccHHHHHHHHHHHcC---CCh--HHHHHHHHHHHcCCCChhhhhhcCC-----
Confidence 87643222 356899999974 4466799998866433211 111 2356788999999976 234443
Q ss_pred CCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhhhhheeecC
Q 000808 828 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDELFLMKRG 906 (1275)
Q Consensus 828 ~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~g 906 (1275)
+.||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|.+
T Consensus 139 ~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~~g~til~~sH~~~-~~~~~~d~v~~l~~- 216 (254)
T PRK10418 139 FEMSGGMLQRMMIALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQKRALGMLLVTHDMG-VVARLADDVAVMSH- 216 (254)
T ss_pred cccCHHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhCCEEEEEEC-
Confidence 579999999999999999999999999999999999999999999998764 899999999975 46678999999985
Q ss_pred cEEEEECCC
Q 000808 907 GQEIYVGPL 915 (1275)
Q Consensus 907 g~~~~~g~~ 915 (1275)
|+++..|+.
T Consensus 217 G~i~~~~~~ 225 (254)
T PRK10418 217 GRIVEQGDV 225 (254)
T ss_pred CEEEEecCH
Confidence 789998886
No 253
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-34 Score=321.08 Aligned_cols=215 Identities=24% Similarity=0.266 Sum_probs=174.6
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCc---eEEEEEEEcC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITISG 753 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~---~~~G~i~~~g 753 (1275)
.++++|+++.+. ++.+|+|+|+++++||+++|+||||||||||+++|+|..++. +.+|+|.++|
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 69 (249)
T PRK14253 3 KFNIENLDLFYG-------------ENQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDG 69 (249)
T ss_pred eEEEeccEEEEC-------------CeeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECC
Confidence 467888888763 245999999999999999999999999999999999975421 2479999999
Q ss_pred ccCCc----ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCc----cccccccCC
Q 000808 754 YPKKQ----ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNP----LRQSLVGLP 825 (1275)
Q Consensus 754 ~~~~~----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~----~~~~~~~~~ 825 (1275)
.+... ...++.++|++|++.+++ .|+.||+.+...... ....+..++++.++++.+++.+ ..+..
T Consensus 70 ~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~---- 142 (249)
T PRK14253 70 EDIYGNIDVADLRIKVGMVFQKPNPFP-MSIYENVAYGLRAQG--IKDKKVLDEVVERSLRGAALWDEVKDRLKSH---- 142 (249)
T ss_pred EEcccccchHHHHhheeEEecCCCcCc-ccHHHHHHhHHHhcC--CCchHHHHHHHHHHHHHcCCchhhhHHhhcC----
Confidence 87531 234567899999998887 899999987643221 1122333456778888888753 22333
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeec
Q 000808 826 GESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKR 905 (1275)
Q Consensus 826 ~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~ 905 (1275)
...||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++++ ++|||+++|+++ ++.+.+|++++|++
T Consensus 143 -~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tii~~sh~~~-~~~~~~d~i~~l~~ 219 (249)
T PRK14253 143 -AFGLSGGQQQRLCIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKK-NYTIVIVTHSMQ-QARRISDRTAFFLM 219 (249)
T ss_pred -cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEecCHH-HHHHhCCEEEEEEC
Confidence 357999999999999999999999999999999999999999999999875 589999999985 57778999999986
Q ss_pred CcEEEEECCC
Q 000808 906 GGQEIYVGPL 915 (1275)
Q Consensus 906 gg~~~~~g~~ 915 (1275)
|+++..|+.
T Consensus 220 -G~i~~~g~~ 228 (249)
T PRK14253 220 -GELVEHDDT 228 (249)
T ss_pred -CEEEEeCCH
Confidence 799998875
No 254
>PRK13538 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=1.4e-34 Score=312.12 Aligned_cols=187 Identities=24% Similarity=0.323 Sum_probs=159.2
Q ss_pred EEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCC
Q 000808 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1275)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 757 (1275)
++++|+++++. ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--p~~G~v~~~g~~~~ 66 (204)
T PRK13538 2 LEARNLACERD-------------ERILFSGLSFTLNAGELVQIEGPNGAGKTSLLRILAGLAR--PDAGEVLWQGEPIR 66 (204)
T ss_pred eEEEEEEEEEC-------------CEEEEecceEEECCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEcc
Confidence 56788887763 2459999999999999999999999999999999999866 34799999998754
Q ss_pred c--ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHH
Q 000808 758 Q--ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQR 835 (1275)
Q Consensus 758 ~--~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGer 835 (1275)
. ..+++.++|++|++.+++.+|+.||+.+...... . ..+++++++++.+|+.+..++.+ ..||||||
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~tv~e~l~~~~~~~~---~---~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~ 135 (204)
T PRK13538 67 RQRDEYHQDLLYLGHQPGIKTELTALENLRFYQRLHG---P---GDDEALWEALAQVGLAGFEDVPV-----RQLSAGQQ 135 (204)
T ss_pred cchHHhhhheEEeCCccccCcCCcHHHHHHHHHHhcC---c---cHHHHHHHHHHHcCCHHHhhCCh-----hhcCHHHH
Confidence 2 2345678999999988899999999987654321 1 12356788999999987777664 46999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCC
Q 000808 836 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPS 890 (1275)
Q Consensus 836 qrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~ 890 (1275)
||++||+||+++|++++|||||+|||+.+...+.+.|++++++|+|||+++|+++
T Consensus 136 qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~ 190 (204)
T PRK13538 136 RRVALARLWLTRAPLWILDEPFTAIDKQGVARLEALLAQHAEQGGMVILTTHQDL 190 (204)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEecChh
Confidence 9999999999999999999999999999999999999998777899999999975
No 255
>PRK00349 uvrA excinuclease ABC subunit A; Reviewed
Probab=100.00 E-value=1.4e-33 Score=356.19 Aligned_cols=123 Identities=24% Similarity=0.306 Sum_probs=102.5
Q ss_pred CCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCcc-ccccccCCCCCCCCHHHHHHHHHHHHHhhCC---cEEEE
Q 000808 778 VTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPL-RQSLVGLPGESGLSTEQRKRLTIAVELVANP---SIIFM 853 (1275)
Q Consensus 778 ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~-~~~~~~~~~~~~lSgGerqrv~ia~~l~~~p---~illl 853 (1275)
+|+.|++.|...+. . .....+.++.+||... .+..+ ..||||||||+.||++|+.+| ++++|
T Consensus 792 ltv~E~l~~f~~~~---~------i~~~l~~L~~vgL~~l~l~~~~-----~tLSgGEkQRl~LAraL~~~p~~~~llIL 857 (943)
T PRK00349 792 MTVEEALEFFEAIP---K------IARKLQTLVDVGLGYIKLGQPA-----TTLSGGEAQRVKLAKELSKRSTGKTLYIL 857 (943)
T ss_pred CcHHHHHHHHHhch---h------hhHHHHHHHHCCCCcccccCCc-----ccCCHHHHHHHHHHHHHhcCCCCCeEEEE
Confidence 78999988865432 1 1124578999999753 45444 469999999999999999999 99999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheee-----cCcEEEEECCCC
Q 000808 854 DEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMK-----RGGQEIYVGPLG 916 (1275)
Q Consensus 854 DEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~-----~gg~~~~~g~~~ 916 (1275)
||||+|||+.+...+++.|+++.++|.|||+++|+++ ....+|+++.|. +||++++.|+++
T Consensus 858 DEPtsGLD~~~~~~L~~~L~~l~~~G~TVIiitH~~~--~i~~aD~ii~Lgp~~G~~~G~Iv~~Gt~~ 923 (943)
T PRK00349 858 DEPTTGLHFEDIRKLLEVLHRLVDKGNTVVVIEHNLD--VIKTADWIIDLGPEGGDGGGEIVATGTPE 923 (943)
T ss_pred ECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH--HHHhCCEEEEecCCcCCCCCEEEEeCCHH
Confidence 9999999999999999999999878999999999975 446899999994 478999999863
No 256
>PRK15056 manganese/iron transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-34 Score=325.27 Aligned_cols=219 Identities=23% Similarity=0.392 Sum_probs=174.9
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 756 (1275)
.++++|+++++. +++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 6 ~l~~~~l~~~~~------------~~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i 71 (272)
T PRK15056 6 GIVVNDVTVTWR------------NGHTALRDASFTVPGGSIAALVGVNGSGKSTLFKALMGFVR--LASGKISILGQPT 71 (272)
T ss_pred eEEEEeEEEEec------------CCcEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEh
Confidence 588999998773 12469999999999999999999999999999999999865 3489999999876
Q ss_pred CcccccceEEEeccCCCCC--CCCCHHHHHHHHHhccCC-CCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHH
Q 000808 757 KQETFTRISGYCEQNDIHS--PFVTVYESLLYSAWLRLP-PEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTE 833 (1275)
Q Consensus 757 ~~~~~~~~~~~v~q~~~~~--~~ltv~e~l~~~~~l~~~-~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgG 833 (1275)
.....++.++|++|++.+. ...+++|++.+....... ........+++++++++.+|+.+..++.+ ..||||
T Consensus 72 ~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgG 146 (272)
T PRK15056 72 RQALQKNLVAYVPQSEEVDWSFPVLVEDVVMMGRYGHMGWLRRAKKRDRQIVTAALARVDMVEFRHRQI-----GELSGG 146 (272)
T ss_pred HHhhccceEEEeccccccccCCCcchhhheecccccccccccCCCHHHHHHHHHHHHHcCChhHhcCCc-----ccCCHH
Confidence 4322234689999997653 234788888653211000 01111223456788999999988777765 469999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcEEEEEC
Q 000808 834 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVG 913 (1275)
Q Consensus 834 erqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g 913 (1275)
||||++|||||+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|+++++ + |++++.|
T Consensus 147 ~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~g~tviivsH~~~-~~~~~~d~v~~~-~-G~i~~~g 223 (272)
T PRK15056 147 QKKRVFLARAIAQQGQVILLDEPFTGVDVKTEARIISLLRELRDEGKTMLVSTHNLG-SVTEFCDYTVMV-K-GTVLASG 223 (272)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEE-C-CEEEeec
Confidence 999999999999999999999999999999999999999998777999999999975 567889998666 4 7999999
Q ss_pred CCCc
Q 000808 914 PLGR 917 (1275)
Q Consensus 914 ~~~~ 917 (1275)
++++
T Consensus 224 ~~~~ 227 (272)
T PRK15056 224 PTET 227 (272)
T ss_pred CHHh
Confidence 8753
No 257
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter. The CCM family is involved in bacterial cytochrome c biogenesis. Cytochrome c maturation in E. coli requires the ccm operon, which encodes eight membrane proteins (CcmABCDEFGH). CcmE is a periplasmic heme chaperone that binds heme covalently and transfers it onto apocytochrome c in the presence of CcmF, CcmG, and CcmH. The CcmAB proteins represent an ABC transporter and the CcmCD proteins participate in heme transfer to CcmE.
Probab=100.00 E-value=1.5e-34 Score=310.99 Aligned_cols=195 Identities=27% Similarity=0.331 Sum_probs=164.7
Q ss_pred EEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCCc
Q 000808 679 TFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 758 (1275)
Q Consensus 679 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 758 (1275)
+++|+++.++ ++.+|+|+|++|++||++||+|+||||||||+++|+|..++ .+|+|.++|.+...
T Consensus 2 ~i~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~ 66 (201)
T cd03231 2 EADELTCERD-------------GRALFSGLSFTLAAGEALQVTGPNGSGKTTLLRILAGLSPP--LAGRVLLNGGPLDF 66 (201)
T ss_pred EEEEEEEEeC-------------CceeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEeccc
Confidence 5678877663 24699999999999999999999999999999999998653 47999999987532
Q ss_pred --ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHH
Q 000808 759 --ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRK 836 (1275)
Q Consensus 759 --~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerq 836 (1275)
..+++.++|++|++.+++.+|++||+.+.... . .+++++++++.+++.+..++.+ ..|||||||
T Consensus 67 ~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~-----~----~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 132 (201)
T cd03231 67 QRDSIARGLLYLGHAPGIKTTLSVLENLRFWHAD-----H----SDEQVEEALARVGLNGFEDRPV-----AQLSAGQQR 132 (201)
T ss_pred ccHHhhhheEEeccccccCCCcCHHHHHHhhccc-----c----cHHHHHHHHHHcCChhhhcCch-----hhCCHHHHH
Confidence 23456789999999888899999999875311 1 2345788999999987777665 469999999
Q ss_pred HHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhhee
Q 000808 837 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLM 903 (1275)
Q Consensus 837 rv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l 903 (1275)
|++|||+|+.+|++++|||||+|||+.+...+.+.|+++.++|+|+|+++|++. +....+|+++.+
T Consensus 133 rl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~-~~~~~~~~~~~~ 198 (201)
T cd03231 133 RVALARLLLSGRPLWILDEPTTALDKAGVARFAEAMAGHCARGGMVVLTTHQDL-GLSEAGARELDL 198 (201)
T ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCch-hhhhccceeEec
Confidence 999999999999999999999999999999999999998777999999999975 566777887665
No 258
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-34 Score=324.84 Aligned_cols=215 Identities=20% Similarity=0.275 Sum_probs=174.4
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCC--C-ceEEEEEEEcC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYITGNITISG 753 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~--~-~~~~G~i~~~g 753 (1275)
.++++|+++.+. ++.+|+|+|++|++||+++|+||||||||||+++|+|... + .+.+|+|.++|
T Consensus 39 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g 105 (286)
T PRK14275 39 HVVAKNFSIYYG-------------EFEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDG 105 (286)
T ss_pred EEEEeeeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECC
Confidence 588999998873 2359999999999999999999999999999999999632 1 02579999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCC----ccccccccC
Q 000808 754 YPKKQ-----ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELN----PLRQSLVGL 824 (1275)
Q Consensus 754 ~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~----~~~~~~~~~ 824 (1275)
.++.. ...++.++|++|++.+++. |+.||+.+....+. ..+....++++.++++.+++. +..+..
T Consensus 106 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 179 (286)
T PRK14275 106 EDIYGKFTDEVLLRKKIGMVFQKPNPFPK-SIFDNIAYGPRLHG--INDKKQLEEIVEKSLRKAALWDEVSDRLDKN--- 179 (286)
T ss_pred EEhhhcccchHHhhhcEEEECCCCCCCcc-CHHHHHHhHHHhcC--CCcHHHHHHHHHHHHHHhCCccchhhHhhCC---
Confidence 87532 1245679999999988875 99999988654321 112233345677888888874 233333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheee
Q 000808 825 PGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMK 904 (1275)
Q Consensus 825 ~~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~ 904 (1275)
...||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|+++ ++.+.+|++++|+
T Consensus 180 --~~~LSgGq~qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~-~~tvIivsH~~~-~~~~~~d~i~~L~ 255 (286)
T PRK14275 180 --ALGLSGGQQQRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRG-SYTIMIVTHNMQ-QASRVSDYTMFFY 255 (286)
T ss_pred --hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEeCCHH-HHHHhCCEEEEEE
Confidence 357999999999999999999999999999999999999999999999865 689999999986 4667899999998
Q ss_pred cCcEEEEECCC
Q 000808 905 RGGQEIYVGPL 915 (1275)
Q Consensus 905 ~gg~~~~~g~~ 915 (1275)
+ |+++..|+.
T Consensus 256 ~-G~i~~~g~~ 265 (286)
T PRK14275 256 E-GVLVEHAPT 265 (286)
T ss_pred C-CEEEEeCCH
Confidence 6 789999886
No 259
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.3e-34 Score=322.94 Aligned_cols=215 Identities=20% Similarity=0.252 Sum_probs=174.2
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCC--C-ceEEEEEEEcC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYITGNITISG 753 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~--~-~~~~G~i~~~g 753 (1275)
-++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|... + .+.+|+|.++|
T Consensus 21 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 87 (268)
T PRK14248 21 ILEVKDLSIYYG-------------EKRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEG 87 (268)
T ss_pred eEEEEEEEEEeC-------------CceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECC
Confidence 488999998873 2459999999999999999999999999999999999632 1 13579999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCc----cccccccC
Q 000808 754 YPKKQ-----ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNP----LRQSLVGL 824 (1275)
Q Consensus 754 ~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~----~~~~~~~~ 824 (1275)
.+... ...++.++|++|++.+++. |++||+.+...... .......++.+.++++.+++.+ ..+..
T Consensus 88 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 161 (268)
T PRK14248 88 LNILDSNINVVNLRREIGMVFQKPNPFPK-SIYNNITHALKYAG--ERRKSVLDEIVEESLTKAALWDEVKDRLHSS--- 161 (268)
T ss_pred EEcccccccHHHHhccEEEEecCCccCcc-cHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHcCCCcchHHHHhcC---
Confidence 87642 1235678999999988874 99999987643221 1112233455778888888852 23333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheee
Q 000808 825 PGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMK 904 (1275)
Q Consensus 825 ~~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~ 904 (1275)
...||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|+++ ++.+.+|++++|+
T Consensus 162 --~~~LSgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~~~~~~d~v~~l~ 237 (268)
T PRK14248 162 --ALSLSGGQQQRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKE-EYSIIIVTHNMQ-QALRVSDRTAFFL 237 (268)
T ss_pred --cccCCHHHHHHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhc-CCEEEEEEeCHH-HHHHhCCEEEEEE
Confidence 357999999999999999999999999999999999999999999999865 689999999975 5678899999998
Q ss_pred cCcEEEEECCC
Q 000808 905 RGGQEIYVGPL 915 (1275)
Q Consensus 905 ~gg~~~~~g~~ 915 (1275)
+ |++++.|+.
T Consensus 238 ~-G~i~~~~~~ 247 (268)
T PRK14248 238 N-GDLVEYDQT 247 (268)
T ss_pred C-CEEEEeCCH
Confidence 6 799999875
No 260
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=9.9e-35 Score=324.49 Aligned_cols=212 Identities=19% Similarity=0.289 Sum_probs=173.9
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 756 (1275)
.++++|+++.++. +...+|+|+|++|++||+++|+||||||||||+++|+|..+ .+|+|.++|.++
T Consensus 2 ~i~~~nls~~~~~-----------~~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~---~~G~I~i~g~~i 67 (275)
T cd03289 2 QMTVKDLTAKYTE-----------GGNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN---TEGDIQIDGVSW 67 (275)
T ss_pred eEEEEEEEEEeCC-----------CCCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC---CCcEEEECCEEh
Confidence 4789999988741 12359999999999999999999999999999999999865 269999999876
Q ss_pred Cc---ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccC------CCC
Q 000808 757 KQ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGL------PGE 827 (1275)
Q Consensus 757 ~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~------~~~ 827 (1275)
.. ...++.++|++|++.+++ .|++||+.... ... ++.+.+.++.+||.+..+...+. +..
T Consensus 68 ~~~~~~~lr~~i~~v~q~~~lf~-~tv~~nl~~~~------~~~----~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g 136 (275)
T cd03289 68 NSVPLQKWRKAFGVIPQKVFIFS-GTFRKNLDPYG------KWS----DEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGG 136 (275)
T ss_pred hhCCHHHHhhhEEEECCCcccch-hhHHHHhhhcc------CCC----HHHHHHHHHHcCCHHHHHhCcccccceecCCC
Confidence 43 234667999999999887 49999995321 111 23467788889998765554431 123
Q ss_pred CCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCc
Q 000808 828 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGG 907 (1275)
Q Consensus 828 ~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg 907 (1275)
..||||||||++|||||+.+|+||+|||||++||+.+...+.+.|++.. +++|||+++|+++ ....+|++++|++ |
T Consensus 137 ~~LS~G~~qrl~LaRall~~p~illlDEpts~LD~~~~~~l~~~l~~~~-~~~tii~isH~~~--~i~~~dri~vl~~-G 212 (275)
T cd03289 137 CVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPITYQVIRKTLKQAF-ADCTVILSEHRIE--AMLECQRFLVIEE-N 212 (275)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEECccccCCHHHHHHHHHHHHHhc-CCCEEEEEECCHH--HHHhCCEEEEecC-C
Confidence 5699999999999999999999999999999999999999999999875 4899999999974 3456999999986 7
Q ss_pred EEEEECCCCc
Q 000808 908 QEIYVGPLGR 917 (1275)
Q Consensus 908 ~~~~~g~~~~ 917 (1275)
+++++|++.+
T Consensus 213 ~i~~~g~~~~ 222 (275)
T cd03289 213 KVRQYDSIQK 222 (275)
T ss_pred eEeecCCHHH
Confidence 9999999843
No 261
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.6e-34 Score=319.92 Aligned_cols=215 Identities=25% Similarity=0.326 Sum_probs=174.5
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCC--c-eEEEEEEEcC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--G-YITGNITISG 753 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~--~-~~~G~i~~~g 753 (1275)
.++++|+++++. .+++|+|+|++|++||+++|+||||||||||+++|+|..++ . +.+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g 70 (251)
T PRK14251 4 IISAKDVHLSYG-------------NYEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEG 70 (251)
T ss_pred eEEEEeeEEEEC-------------CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECC
Confidence 478999998873 23599999999999999999999999999999999997541 1 2589999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCc----cccccccC
Q 000808 754 YPKKQ-----ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNP----LRQSLVGL 824 (1275)
Q Consensus 754 ~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~----~~~~~~~~ 824 (1275)
.+... ...++.++|++|++.+++ .|++||+.+...... ....+..++.++++++.+++.. ..+..
T Consensus 71 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 144 (251)
T PRK14251 71 QNIYGSKMDLVELRKEVGMVFQQPTPFP-FSVYDNVAYGLKIAG--VKDKELIDQRVEESLKQAAIWKETKDNLDRN--- 144 (251)
T ss_pred EEcccccchHHHhhccEEEEecCCccCC-CcHHHHHHHHHHHcC--CCCHHHHHHHHHHHHHHcCCCcchHHHhccC---
Confidence 87532 123567899999988876 799999987643221 1122333456788899999852 22332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheee
Q 000808 825 PGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMK 904 (1275)
Q Consensus 825 ~~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~ 904 (1275)
...||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++.+ ++|||+++|+++ ++.+.+|++++|+
T Consensus 145 --~~~LS~Gq~qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiiiisH~~~-~~~~~~d~i~~l~ 220 (251)
T PRK14251 145 --AQAFSGGQQQRICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKH-QYTFIMVTHNLQ-QAGRISDQTAFLM 220 (251)
T ss_pred --hhhCCHHHHHHHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHc-CCeEEEEECCHH-HHHhhcCEEEEEE
Confidence 357999999999999999999999999999999999999999999999854 689999999986 5677899999998
Q ss_pred cCcEEEEECCC
Q 000808 905 RGGQEIYVGPL 915 (1275)
Q Consensus 905 ~gg~~~~~g~~ 915 (1275)
+ |+++..|+.
T Consensus 221 ~-G~i~~~~~~ 230 (251)
T PRK14251 221 N-GDLIEAGPT 230 (251)
T ss_pred C-CEEEEeCCH
Confidence 6 789988875
No 262
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.1e-34 Score=322.21 Aligned_cols=219 Identities=23% Similarity=0.289 Sum_probs=177.6
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCC---ceEEEEEEEcC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGNITISG 753 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~---~~~~G~i~~~g 753 (1275)
.++++|++++++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+.+|+|.++|
T Consensus 21 ~l~i~nl~~~~~-------------~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g 87 (276)
T PRK14271 21 AMAAVNLTLGFA-------------GKTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGG 87 (276)
T ss_pred EEEEeeEEEEEC-------------CEEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECC
Confidence 589999998874 24699999999999999999999999999999999997542 13589999999
Q ss_pred ccCCc----ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCC
Q 000808 754 YPKKQ----ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESG 829 (1275)
Q Consensus 754 ~~~~~----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~ 829 (1275)
.++.. ...++.++|++|++.+++ .|++||+.+...... ..+.++.++.+.++++.+++.+..+.... .....
T Consensus 88 ~~i~~~~~~~~~~~~i~~v~q~~~l~~-~tv~eni~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~l~-~~~~~ 163 (276)
T PRK14271 88 RSIFNYRDVLEFRRRVGMLFQRPNPFP-MSIMDNVLAGVRAHK--LVPRKEFRGVAQARLTEVGLWDAVKDRLS-DSPFR 163 (276)
T ss_pred EEccccchhHHHhhheEEeccCCccCC-ccHHHHHHHHHHhcc--CCCHHHHHHHHHHHHHHcCCCchhhhHhh-CCccc
Confidence 87542 134567899999998887 899999987643221 12333444556788999998653221111 12357
Q ss_pred CCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcEE
Q 000808 830 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQE 909 (1275)
Q Consensus 830 lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~ 909 (1275)
||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++.+ ++|||+++|+++ ++.+.+|++++|.+ |++
T Consensus 164 LSgGq~qrl~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tiiivsH~~~-~~~~~~dri~~l~~-G~i 240 (276)
T PRK14271 164 LSGGQQQLLCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLAD-RLTVIIVTHNLA-QAARISDRAALFFD-GRL 240 (276)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999876 589999999975 56788999999996 799
Q ss_pred EEECCC
Q 000808 910 IYVGPL 915 (1275)
Q Consensus 910 ~~~g~~ 915 (1275)
+..|++
T Consensus 241 ~~~g~~ 246 (276)
T PRK14271 241 VEEGPT 246 (276)
T ss_pred EEeCCH
Confidence 999986
No 263
>cd03220 ABC_KpsT_Wzt ABC_KpsT_Wzt The KpsT/Wzt ABC transporter subfamily is involved in extracellular polysaccharide export. Among the variety of membrane-linked or extracellular polysaccharides excreted by bacteria, only capsular polysaccharides, lipopolysaccharides, and teichoic acids have been shown to be exported by ABC transporters. A typical system is made of a conserved integral membrane and an ABC. In addition to these proteins, capsular polysaccharide exporter systems require two 'accessory' proteins to perform their function: a periplasmic (E.coli) or a lipid-anchored outer membrane protein called OMA (Neisseria meningitidis and Haemophilus influenzae) and a cytoplasmic membrane protein MPA2.
Probab=100.00 E-value=2.6e-34 Score=314.23 Aligned_cols=192 Identities=27% Similarity=0.357 Sum_probs=159.1
Q ss_pred cccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCCcccccceEEEeccCCCCCCCCCH
Q 000808 701 DKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQETFTRISGYCEQNDIHSPFVTV 780 (1275)
Q Consensus 701 ~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~~~~~~~~~~v~q~~~~~~~ltv 780 (1275)
+++++|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ..+...+.+.+||
T Consensus 33 ~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~~---------~~~~~~~~~~~tv 101 (224)
T cd03220 33 GEFWALKDVSFEVPRGERIGLIGRNGAGKSTLLRLLAGIYP--PDSGTVTVRGRVSSL---------LGLGGGFNPELTG 101 (224)
T ss_pred CCeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEchh---------hcccccCCCCCcH
Confidence 34679999999999999999999999999999999999865 358999999976421 1112234567999
Q ss_pred HHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCC
Q 000808 781 YESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 860 (1275)
Q Consensus 781 ~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgL 860 (1275)
+||+.+..... ..+..+.+++++++++.+++.+..++.+ ..||||||||++|||+|+.+|++++|||||+||
T Consensus 102 ~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~laral~~~p~llllDEP~~gL 173 (224)
T cd03220 102 RENIYLNGRLL---GLSRKEIDEKIDEIIEFSELGDFIDLPV-----KTYSSGMKARLAFAIATALEPDILLIDEVLAVG 173 (224)
T ss_pred HHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccC
Confidence 99998765432 1223344556788999999988777765 469999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcEEEEEC
Q 000808 861 DARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVG 913 (1275)
Q Consensus 861 D~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g 913 (1275)
|+.++..+.+.|++++++|+|||+++|+++ ++...+|++++|.+ |+++..|
T Consensus 174 D~~~~~~~~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g 224 (224)
T cd03220 174 DAAFQEKCQRRLRELLKQGKTVILVSHDPS-SIKRLCDRALVLEK-GKIRFDG 224 (224)
T ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEecC
Confidence 999999999999998777899999999975 56678999999985 7887655
No 264
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.8e-34 Score=319.98 Aligned_cols=215 Identities=25% Similarity=0.269 Sum_probs=174.9
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCc---eEEEEEEEcC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITISG 753 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~---~~~G~i~~~g 753 (1275)
-++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..... ..+|+|.++|
T Consensus 6 ~i~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 72 (253)
T PRK14261 6 ILSTKNLNLWYG-------------EKHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNG 72 (253)
T ss_pred eEEEeeeEEEEC-------------CeeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECC
Confidence 488999998763 245999999999999999999999999999999999964311 1479999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCc----cccccccC
Q 000808 754 YPKKQ-----ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNP----LRQSLVGL 824 (1275)
Q Consensus 754 ~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~----~~~~~~~~ 824 (1275)
.++.. ...++.++|++|++.+++. ||+||+.+....+.. ....+.++.+.++++.+++.+ ..+..
T Consensus 73 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~-tv~eni~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 146 (253)
T PRK14261 73 ENIMDSGADVVALRRKIGMVFQRPNPFPK-SIYENVAYGPRIHGE--KNKKTLDTIVEKSLKGAALWDEVKDRLHDS--- 146 (253)
T ss_pred EEccccccchhhhhceEEEEecCCccCcc-cHHHHHHhhHHhcCC--CCHHHHHHHHHHHHHHhcCchhhHHHhhcC---
Confidence 87642 2235678999999988874 999999887543311 122334456788888888753 22333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheee
Q 000808 825 PGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMK 904 (1275)
Q Consensus 825 ~~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~ 904 (1275)
.+.||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++++ ++|||+++|++. ++.+.+|++++|+
T Consensus 147 --~~~LS~G~~qrv~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~-~~tvii~sh~~~-~~~~~~d~v~~l~ 222 (253)
T PRK14261 147 --ALSLSGGQQQRLCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKK-EYTVIIVTHNMQ-QAARVSDYTGFMY 222 (253)
T ss_pred --hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhh-CceEEEEEcCHH-HHHhhCCEEEEEE
Confidence 357999999999999999999999999999999999999999999999865 689999999975 4667899999998
Q ss_pred cCcEEEEECCC
Q 000808 905 RGGQEIYVGPL 915 (1275)
Q Consensus 905 ~gg~~~~~g~~ 915 (1275)
+ |+++..|+.
T Consensus 223 ~-G~i~~~g~~ 232 (253)
T PRK14261 223 L-GKLIEFDKT 232 (253)
T ss_pred C-CEEEEcCCH
Confidence 6 789998886
No 265
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=3.1e-34 Score=322.39 Aligned_cols=225 Identities=25% Similarity=0.326 Sum_probs=179.0
Q ss_pred EEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCC
Q 000808 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1275)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 757 (1275)
++++|+++.+.... ..+ ...++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 4 l~~~nl~~~~~~~~---~~~-~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~sG~i~~~g~~~~ 77 (268)
T PRK10419 4 LNVSGLSHHYAHGG---LSG-KHQHQTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLES--PSQGNVSWRGEPLA 77 (268)
T ss_pred EEEeceEEEecCCc---ccc-ccCceeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEecc
Confidence 67889988774100 000 0013569999999999999999999999999999999999765 35899999998754
Q ss_pred cc------cccceEEEeccCC--CCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCC-ccccccccCCCCC
Q 000808 758 QE------TFTRISGYCEQND--IHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELN-PLRQSLVGLPGES 828 (1275)
Q Consensus 758 ~~------~~~~~~~~v~q~~--~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~~~ 828 (1275)
.. ..++.++|++|++ .+.+..|+.|++.+..... ......+..++++++++.+|+. +..+..+ .
T Consensus 78 ~~~~~~~~~~~~~i~~v~q~~~~~~~~~~t~~~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~-----~ 150 (268)
T PRK10419 78 KLNRAQRKAFRRDIQMVFQDSISAVNPRKTVREIIREPLRHL--LSLDKAERLARASEMLRAVDLDDSVLDKRP-----P 150 (268)
T ss_pred ccChhHHHHHHhcEEEEEcChhhccCCCCCHHHHHHHHHHhh--ccCCHHHHHHHHHHHHHHcCCChhHhhCCC-----c
Confidence 21 2356799999997 3567789999987653211 1123344455788999999996 4555554 4
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhhhhheeecCc
Q 000808 829 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDELFLMKRGG 907 (1275)
Q Consensus 829 ~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg 907 (1275)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ .+.+.+|++++|.+ |
T Consensus 151 ~LS~Ge~qrl~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiiivsH~~~-~i~~~~d~i~~l~~-G 228 (268)
T PRK10419 151 QLSGGQLQRVCLARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLR-LVERFCQRVMVMDN-G 228 (268)
T ss_pred cCChHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHHcCcEEEEEECCHH-HHHHhCCEEEEEEC-C
Confidence 69999999999999999999999999999999999999999999998765 899999999975 56678999999985 7
Q ss_pred EEEEECCCCc
Q 000808 908 QEIYVGPLGR 917 (1275)
Q Consensus 908 ~~~~~g~~~~ 917 (1275)
++++.|+..+
T Consensus 229 ~i~~~g~~~~ 238 (268)
T PRK10419 229 QIVETQPVGD 238 (268)
T ss_pred EEeeeCChhh
Confidence 9999998743
No 266
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.4e-34 Score=319.02 Aligned_cols=219 Identities=19% Similarity=0.242 Sum_probs=174.4
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCc---eEEEEEEEcC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITISG 753 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~---~~~G~i~~~g 753 (1275)
.++++|+++.+. ++.+|+|+|++|++||+++|+||||||||||+++|+|..++. +..|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 70 (251)
T PRK14249 4 KIKIRGVNFFYH-------------KHQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDN 70 (251)
T ss_pred eEEEEEEEEEEC-------------CeeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECC
Confidence 478899998763 235999999999999999999999999999999999976531 2369999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCC
Q 000808 754 YPKKQ-----ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGES 828 (1275)
Q Consensus 754 ~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~ 828 (1275)
.+... ...++.++|++|++.+++. |++||+.+....+.. ...+..++.++++++.+++.+...... +....
T Consensus 71 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~-~~~~~ 146 (251)
T PRK14249 71 ENIYSPNLDVVNLRKRVGMVFQQPNPFPK-SIFDNVAFGPRMLGT--TAQSRLDEVVEKSLRQAALWDEVKDNL-HKSGL 146 (251)
T ss_pred EEccccccChHHhhceEEEEecCCccCcC-cHHHHHhhHHHhcCC--ChhhHHHHHHHHHHHHhCCchhhhhHh-hCCcc
Confidence 87532 1345679999999988875 999999886543211 112233455777888888753211111 11235
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcE
Q 000808 829 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQ 908 (1275)
Q Consensus 829 ~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~ 908 (1275)
.||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++. +++|||+++|+++ .+.+.+|++++|.+ |+
T Consensus 147 ~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tilivsh~~~-~~~~~~d~i~~l~~-G~ 223 (251)
T PRK14249 147 ALSGGQQQRLCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELK-QNYTIAIVTHNMQ-QAARASDWTGFLLT-GD 223 (251)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCEEEEEeCCHH-HHHhhCCEEEEEeC-Ce
Confidence 799999999999999999999999999999999999999999999985 5899999999975 56678899999985 78
Q ss_pred EEEECCC
Q 000808 909 EIYVGPL 915 (1275)
Q Consensus 909 ~~~~g~~ 915 (1275)
+++.|+.
T Consensus 224 i~~~~~~ 230 (251)
T PRK14249 224 LVEYGRT 230 (251)
T ss_pred EEEeCCH
Confidence 9999986
No 267
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.6e-34 Score=323.06 Aligned_cols=213 Identities=23% Similarity=0.293 Sum_probs=173.5
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCC---ceEEEEEEEcC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGNITISG 753 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~---~~~~G~i~~~g 753 (1275)
.++++|+++.+. ++.+|+|+||+|++||+++|+||||||||||+++|+|..++ .+.+|+|.++|
T Consensus 39 ~l~i~~l~~~~~-------------~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G 105 (285)
T PRK14254 39 VIEARDLNVFYG-------------DEQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRG 105 (285)
T ss_pred eEEEEEEEEEEC-------------CEeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECC
Confidence 588999998873 23599999999999999999999999999999999997542 13579999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCc----cccccccC
Q 000808 754 YPKKQ-----ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNP----LRQSLVGL 824 (1275)
Q Consensus 754 ~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~----~~~~~~~~ 824 (1275)
.+... ...++.++|++|++.+++. |+.||+.+....+. ... ..+++++++++.+++.+ ..+..
T Consensus 106 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~---~~~-~~~~~~~~~l~~~~l~~~i~~~~~~~--- 177 (285)
T PRK14254 106 KNVYDADVDPVALRRRIGMVFQKPNPFPK-SIYDNVAYGLKIQG---YDG-DIDERVEESLRRAALWDEVKDQLDSS--- 177 (285)
T ss_pred EEccccccchHhhhccEEEEecCCccCcC-CHHHHHHHHHHHcC---CcH-HHHHHHHHHHHHcCCCchhHHHHhCC---
Confidence 87532 2345679999999888875 99999987654331 112 23456888999999853 23333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhhe-e
Q 000808 825 PGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFL-M 903 (1275)
Q Consensus 825 ~~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~-l 903 (1275)
...||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|+++ .+...+|++++ |
T Consensus 178 --~~~LSgGe~qrv~LAraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~-~~tiii~tH~~~-~i~~~~dri~v~l 253 (285)
T PRK14254 178 --GLDLSGGQQQRLCIARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAE-EYTVVIVTHNMQ-QAARISDKTAVFL 253 (285)
T ss_pred --cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHhhcCEEEEEe
Confidence 357999999999999999999999999999999999999999999999876 489999999975 56678999764 5
Q ss_pred ecCcEEEEECCC
Q 000808 904 KRGGQEIYVGPL 915 (1275)
Q Consensus 904 ~~gg~~~~~g~~ 915 (1275)
. +|+++..|+.
T Consensus 254 ~-~G~i~~~g~~ 264 (285)
T PRK14254 254 T-GGELVEFDDT 264 (285)
T ss_pred e-CCEEEEeCCH
Confidence 6 4799998875
No 268
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=2.9e-34 Score=352.75 Aligned_cols=220 Identities=23% Similarity=0.347 Sum_probs=181.3
Q ss_pred EEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCC
Q 000808 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1275)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 757 (1275)
++++|++++++ ++.+|+|||+++++||+++|+||||||||||+++|+|..++++.+|+|.++|.+..
T Consensus 2 l~i~~l~~~~~-------------~~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~ 68 (500)
T TIGR02633 2 LEMKGIVKTFG-------------GVKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGSPLK 68 (500)
T ss_pred EEEEeEEEEeC-------------CeEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECC
Confidence 56788888763 24599999999999999999999999999999999997653224899999998764
Q ss_pred cc----cccceEEEeccCCCCCCCCCHHHHHHHHHhccCCC-CCCHHHHHHHHHHHHHHcCCCccc-cccccCCCCCCCC
Q 000808 758 QE----TFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPP-EVDSETQKMFIEEIMELVELNPLR-QSLVGLPGESGLS 831 (1275)
Q Consensus 758 ~~----~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~-~~~~~~~~~~~~~~l~~l~l~~~~-~~~~~~~~~~~lS 831 (1275)
.. ..++.++|++|++.+++.+||+||+.+........ ....++.+++++++++.+++.+.. +..+ +.||
T Consensus 69 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LS 143 (500)
T TIGR02633 69 ASNIRDTERAGIVIIHQELTLVPELSVAENIFLGNEITLPGGRMAYNAMYLRAKNLLRELQLDADNVTRPV-----GDYG 143 (500)
T ss_pred CCCHHHHHhCCEEEEeeccccCCCCcHHHHHHhhccccccccccCHHHHHHHHHHHHHHcCCCCCcccCch-----hhCC
Confidence 31 12356899999998899999999998764332111 122334456788999999997654 3444 4699
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcEEEE
Q 000808 832 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQEIY 911 (1275)
Q Consensus 832 gGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~ 911 (1275)
|||||||+||+||+.+|++|+|||||+|||+.+...+.+.|++++++|+|||+++|+++ .+.+.+|++++|++ |+++.
T Consensus 144 gG~~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiitHd~~-~~~~~~d~i~~l~~-G~i~~ 221 (500)
T TIGR02633 144 GGQQQLVEIAKALNKQARLLILDEPSSSLTEKETEILLDIIRDLKAHGVACVYISHKLN-EVKAVCDTICVIRD-GQHVA 221 (500)
T ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCcHH-HHHHhCCEEEEEeC-CeEee
Confidence 99999999999999999999999999999999999999999999878999999999975 56778999999986 78999
Q ss_pred ECCCCc
Q 000808 912 VGPLGR 917 (1275)
Q Consensus 912 ~g~~~~ 917 (1275)
.|++.+
T Consensus 222 ~~~~~~ 227 (500)
T TIGR02633 222 TKDMST 227 (500)
T ss_pred ecCccc
Confidence 998754
No 269
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.3e-34 Score=318.27 Aligned_cols=219 Identities=19% Similarity=0.229 Sum_probs=176.8
Q ss_pred cEEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCC--c-eEEEEEEEc
Q 000808 676 HSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--G-YITGNITIS 752 (1275)
Q Consensus 676 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~--~-~~~G~i~~~ 752 (1275)
..+..+++++.+. ++.+|+|+|+++++||+++|+|+||||||||+++|+|..++ + +.+|+|.++
T Consensus 7 ~~~~~~~~~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~ 73 (261)
T PRK14263 7 IVMDCKLDKIFYG-------------NFMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFL 73 (261)
T ss_pred ceEEEEeEEEEeC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEEC
Confidence 4577777776652 34699999999999999999999999999999999997642 1 258999999
Q ss_pred CccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCC
Q 000808 753 GYPKKQ-----ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGE 827 (1275)
Q Consensus 753 g~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~ 827 (1275)
|.+... ..+++.++|++|++.++ .+|+.||+.+....+. . ..+.++.++++++.+++.+..+...+ ...
T Consensus 74 g~~i~~~~~~~~~~~~~i~~v~q~~~~~-~~tv~enl~~~~~~~~---~-~~~~~~~~~~~l~~~~l~~~i~~~~~-~~~ 147 (261)
T PRK14263 74 GQDVYGKGVDPVVVRRYIGMVFQQPNPF-SMSIFDNVAFGLRLNR---Y-KGDLGDRVKHALQGAALWDEVKDKLK-VSG 147 (261)
T ss_pred CEeccccccchHhhhhceEEEecCCccc-cccHHHHHHHHHhhcC---c-hHHHHHHHHHHHHHcCCchhhhhhhh-CCc
Confidence 987632 13456789999998877 5999999988754331 1 12234568889999998643222221 123
Q ss_pred CCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheee---
Q 000808 828 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMK--- 904 (1275)
Q Consensus 828 ~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~--- 904 (1275)
+.||||||||++|||||+++|++|+|||||+|||+.++..+.+.|+++. +++|||+++|+++ ++.+.+|++++|+
T Consensus 148 ~~LS~G~~qrv~laral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~-~~~tii~isH~~~-~i~~~~d~v~~l~~~~ 225 (261)
T PRK14263 148 LSLSGGQQQRLCIARAIATEPEVLLLDEPCSALDPIATRRVEELMVELK-KDYTIALVTHNMQ-QAIRVADTTAFFSVDI 225 (261)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHHhCCEEEEEeccc
Confidence 5799999999999999999999999999999999999999999999985 4799999999986 5678899999996
Q ss_pred ----cCcEEEEECCC
Q 000808 905 ----RGGQEIYVGPL 915 (1275)
Q Consensus 905 ----~gg~~~~~g~~ 915 (1275)
++|+++..|+.
T Consensus 226 ~~~~~~G~i~~~g~~ 240 (261)
T PRK14263 226 SQGTRTGYLVEMGPT 240 (261)
T ss_pred ccccCCceEEEeCCH
Confidence 35899999986
No 270
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=2.5e-34 Score=352.76 Aligned_cols=212 Identities=21% Similarity=0.317 Sum_probs=181.4
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 756 (1275)
-++++|++++++ ++.+|+|+||++++||+++|+|||||||||||++|+|..++ .+|+|.++|.+.
T Consensus 11 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~ 75 (510)
T PRK15439 11 LLCARSISKQYS-------------GVEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPP--DSGTLEIGGNPC 75 (510)
T ss_pred eEEEEeEEEEeC-------------CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEC
Confidence 488999998873 24599999999999999999999999999999999998653 489999999876
Q ss_pred Ccc---c-ccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCH
Q 000808 757 KQE---T-FTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLST 832 (1275)
Q Consensus 757 ~~~---~-~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSg 832 (1275)
... . .++.+||++|++.+++.+||+|++.+... . ..+.+++++++++.+|+.+..+..+ ..|||
T Consensus 76 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~-----~--~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 143 (510)
T PRK15439 76 ARLTPAKAHQLGIYLVPQEPLLFPNLSVKENILFGLP-----K--RQASMQKMKQLLAALGCQLDLDSSA-----GSLEV 143 (510)
T ss_pred CCCCHHHHHhCCEEEEeccCccCCCCcHHHHhhcccc-----c--chHHHHHHHHHHHHcCCCccccCCh-----hhCCH
Confidence 431 1 22458999999999999999999987531 1 1233456889999999988777765 46999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcEEEEE
Q 000808 833 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYV 912 (1275)
Q Consensus 833 Gerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~ 912 (1275)
||||||+|||+|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|+++ .+.+.+|++++|.+ |++++.
T Consensus 144 G~~qrv~la~aL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~-~~~~~~d~i~~l~~-G~i~~~ 221 (510)
T PRK15439 144 ADRQIVEILRGLMRDSRILILDEPTASLTPAETERLFSRIRELLAQGVGIVFISHKLP-EIRQLADRISVMRD-GTIALS 221 (510)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEe
Confidence 9999999999999999999999999999999999999999999877999999999975 46788999999986 789999
Q ss_pred CCCCc
Q 000808 913 GPLGR 917 (1275)
Q Consensus 913 g~~~~ 917 (1275)
|+.++
T Consensus 222 g~~~~ 226 (510)
T PRK15439 222 GKTAD 226 (510)
T ss_pred cChHH
Confidence 98754
No 271
>TIGR01166 cbiO cobalt transport protein ATP-binding subunit. This model describes the ATP binding subunit of the multisubunit cobalt transporter in bacteria and its equivalents in archaea. The model is restricted to ATP subunit that is a part of the cobalt transporter, which belongs to the ABC transporter superfamily (ATP Binding Cassette). The model excludes ATP binding subunit that are associated with other transporters belonging to ABC transporter superfamily. This superfamily includes two groups, one which catalyze the uptake of small molecules, including ions from the external milieu and the other group which is engaged in the efflux of small molecular weight compounds and ions from within the cell. Energy derived from the hydrolysis of ATP drive the both the process of uptake and efflux.
Probab=100.00 E-value=2.5e-34 Score=306.97 Aligned_cols=179 Identities=26% Similarity=0.330 Sum_probs=150.5
Q ss_pred ccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCCc-----ccccceEEEeccCCC-CC
Q 000808 702 KLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ-----ETFTRISGYCEQNDI-HS 775 (1275)
Q Consensus 702 ~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~-----~~~~~~~~~v~q~~~-~~ 775 (1275)
++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++. .+
T Consensus 4 ~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 81 (190)
T TIGR01166 4 GPEVLKGLNFAAERGEVLALLGANGAGKSTLLLHLNGLLR--PQSGAVLIDGEPLDYSRKGLLERRQRVGLVFQDPDDQL 81 (190)
T ss_pred ccceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceeEEECCEEccccccchHHHHhhEEEEecChhhcc
Confidence 3569999999999999999999999999999999999865 348999999987531 123557899999973 23
Q ss_pred CCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeC
Q 000808 776 PFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDE 855 (1275)
Q Consensus 776 ~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~~l~~~p~illlDE 855 (1275)
...|++||+.+..... ..+.++.+++++++++.+|+.+..++.+ ..||||||||++|||||+.+|++++|||
T Consensus 82 ~~~tv~~nl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDE 153 (190)
T TIGR01166 82 FAADVDQDVAFGPLNL---GLSEAEVERRVREALTAVGASGLRERPT-----HCLSGGEKKRVAIAGAVAMRPDVLLLDE 153 (190)
T ss_pred ccccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCchhhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcC
Confidence 3479999998865322 1233444566889999999988777765 4699999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCC
Q 000808 856 PTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPS 890 (1275)
Q Consensus 856 PtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~ 890 (1275)
||+|||+.++..+.+.|++++++|+|||+++|+++
T Consensus 154 Pt~~LD~~~~~~~~~~l~~~~~~~~tili~sH~~~ 188 (190)
T TIGR01166 154 PTAGLDPAGREQMLAILRRLRAEGMTVVISTHDVD 188 (190)
T ss_pred CcccCCHHHHHHHHHHHHHHHHcCCEEEEEeeccc
Confidence 99999999999999999998777999999999975
No 272
>CHL00131 ycf16 sulfate ABC transporter protein; Validated
Probab=100.00 E-value=6.3e-34 Score=318.39 Aligned_cols=221 Identities=24% Similarity=0.287 Sum_probs=175.6
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 756 (1275)
.++++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|.....+.+|+|.++|.+.
T Consensus 7 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~G~i~~~g~~~ 73 (252)
T CHL00131 7 ILEIKNLHASVN-------------ENEILKGLNLSINKGEIHAIMGPNGSGKSTLSKVIAGHPAYKILEGDILFKGESI 73 (252)
T ss_pred eEEEEeEEEEeC-------------CEEeeecceeEEcCCcEEEEECCCCCCHHHHHHHHcCCCcCcCCCceEEECCEEc
Confidence 488999988763 2359999999999999999999999999999999999621114589999999876
Q ss_pred Ccc---cccc-eEEEeccCCCCCCCCCHHHHHHHHHhccCC----CCCCHHHHHHHHHHHHHHcCCC-ccccccccCCCC
Q 000808 757 KQE---TFTR-ISGYCEQNDIHSPFVTVYESLLYSAWLRLP----PEVDSETQKMFIEEIMELVELN-PLRQSLVGLPGE 827 (1275)
Q Consensus 757 ~~~---~~~~-~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~----~~~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~~ 827 (1275)
... ..++ .++|++|++.+++.+|+.|++.+....... ......+..+++.++++.+++. +..+..++
T Consensus 74 ~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~---- 149 (252)
T CHL00131 74 LDLEPEERAHLGIFLAFQYPIEIPGVSNADFLRLAYNSKRKFQGLPELDPLEFLEIINEKLKLVGMDPSFLSRNVN---- 149 (252)
T ss_pred ccCChhhhheeeEEEEeccccccccccHHHHHHHhhhhhhcccccccccHHHHHHHHHHHHHHcCCchhhhccccc----
Confidence 431 2222 478999999999999999998765432110 0112223345678899999996 34455442
Q ss_pred CCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHh-hhhhheeecC
Q 000808 828 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFES-FDELFLMKRG 906 (1275)
Q Consensus 828 ~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~-~d~~~~l~~g 906 (1275)
..||||||||++||+||+.+|++++|||||+|||+.++..+.+.|++++++|+|||++||+++ .+... +|++++|.+
T Consensus 150 ~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~~tH~~~-~~~~~~~d~i~~l~~- 227 (252)
T CHL00131 150 EGFSGGEKKRNEILQMALLDSELAILDETDSGLDIDALKIIAEGINKLMTSENSIILITHYQR-LLDYIKPDYVHVMQN- 227 (252)
T ss_pred cCCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHhhhCCEEEEEeC-
Confidence 249999999999999999999999999999999999999999999998777899999999975 34444 799999985
Q ss_pred cEEEEECCCC
Q 000808 907 GQEIYVGPLG 916 (1275)
Q Consensus 907 g~~~~~g~~~ 916 (1275)
|++++.|+++
T Consensus 228 G~i~~~~~~~ 237 (252)
T CHL00131 228 GKIIKTGDAE 237 (252)
T ss_pred CEEEEecChh
Confidence 7999999874
No 273
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=6.8e-35 Score=371.63 Aligned_cols=210 Identities=28% Similarity=0.391 Sum_probs=177.3
Q ss_pred cEEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCcc
Q 000808 676 HSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 755 (1275)
Q Consensus 676 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~ 755 (1275)
..++++|++|+|+. +++++|+|+|++|+|||++||+||||||||||+|+|+|..+ +.+|+|.+||.+
T Consensus 450 ~~I~~~nvsf~Y~~-----------~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~--p~~G~I~idg~~ 516 (686)
T TIGR03797 450 GAIEVDRVTFRYRP-----------DGPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFET--PESGSVFYDGQD 516 (686)
T ss_pred ceEEEEEEEEEcCC-----------CCccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEE
Confidence 46999999999841 23469999999999999999999999999999999999876 348999999998
Q ss_pred CCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCcc-------ccccccCC
Q 000808 756 KKQ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPL-------RQSLVGLP 825 (1275)
Q Consensus 756 ~~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~-------~~~~~~~~ 825 (1275)
++. ..+++.+|||+|++.+++ -|++||+.++. + .+ ++.++++++..++.+. .|+.+|..
T Consensus 517 i~~~~~~~lr~~i~~v~Q~~~lf~-gTI~eNi~~~~----~--~~----~e~i~~al~~a~l~~~i~~lp~G~dt~ige~ 585 (686)
T TIGR03797 517 LAGLDVQAVRRQLGVVLQNGRLMS-GSIFENIAGGA----P--LT----LDEAWEAARMAGLAEDIRAMPMGMHTVISEG 585 (686)
T ss_pred cCcCCHHHHHhccEEEccCCccCc-ccHHHHHhcCC----C--CC----HHHHHHHHHHcCcHHHHHhccccccccccCC
Confidence 753 456788999999999886 59999998642 1 22 2346677887777643 35666644
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeec
Q 000808 826 GESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKR 905 (1275)
Q Consensus 826 ~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~ 905 (1275)
..+||||||||++|||||+++|+||+||||||+||+.+++.+.+.|+++ ++|+|+++|+++ ..+.+|+|++|++
T Consensus 586 -G~~LSGGQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~---~~T~IiItHr~~--~i~~~D~Iivl~~ 659 (686)
T TIGR03797 586 -GGTLSGGQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSESLERL---KVTRIVIAHRLS--TIRNADRIYVLDA 659 (686)
T ss_pred -CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh---CCeEEEEecChH--HHHcCCEEEEEEC
Confidence 3579999999999999999999999999999999999999999999876 589999999974 5678999999986
Q ss_pred CcEEEEECCCC
Q 000808 906 GGQEIYVGPLG 916 (1275)
Q Consensus 906 gg~~~~~g~~~ 916 (1275)
|+++..|+.+
T Consensus 660 -G~iv~~G~~~ 669 (686)
T TIGR03797 660 -GRVVQQGTYD 669 (686)
T ss_pred -CEEEEECCHH
Confidence 7999999863
No 274
>PRK00635 excinuclease ABC subunit A; Provisional
Probab=100.00 E-value=3e-33 Score=365.55 Aligned_cols=136 Identities=21% Similarity=0.236 Sum_probs=108.6
Q ss_pred CCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCcc-ccccccCCCCCCCCHHHHHHHHHHHHHh---hCCc
Q 000808 774 HSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPL-RQSLVGLPGESGLSTEQRKRLTIAVELV---ANPS 849 (1275)
Q Consensus 774 ~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~-~~~~~~~~~~~~lSgGerqrv~ia~~l~---~~p~ 849 (1275)
.+...||.|+|.++..-........++..+++ ++++.+||.+. .+..+ ..||||||||++||++|+ .+|+
T Consensus 759 ~~~~~tI~evL~mtv~ea~~~f~~~~~i~~~l-~~L~~vGL~~l~l~q~~-----~tLSGGE~QRV~LAraL~~~~~~P~ 832 (1809)
T PRK00635 759 RYKGKNIADILEMTAYEAEKFFLDEPSIHEKI-HALCSLGLDYLPLGRPL-----SSLSGGEIQRLKLAYELLAPSKKPT 832 (1809)
T ss_pred ccCCCCHHHHHHcCHHHHHHcccChHHHHHHH-HHHHHcCCcchhhcCcc-----ccCCHHHHHHHHHHHHHhhcCCCCC
Confidence 45568999999877542211112233444556 57889999875 56554 469999999999999998 6999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheee-----cCcEEEEECCCCc
Q 000808 850 IIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMK-----RGGQEIYVGPLGR 917 (1275)
Q Consensus 850 illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~-----~gg~~~~~g~~~~ 917 (1275)
+++|||||+|||+.+...+++.|+++.++|.|||+++|+++ .+ +.+|++++|. +||+++..|++++
T Consensus 833 LLILDEPTsGLD~~~~~~Ll~lL~~L~~~G~TVIiIsHdl~-~i-~~aDrVi~L~p~gg~~~G~iv~~Gtpee 903 (1809)
T PRK00635 833 LYVLDEPTTGLHTHDIKALIYVLQSLTHQGHTVVIIEHNMH-VV-KVADYVLELGPEGGNLGGYLLASCSPEE 903 (1809)
T ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HH-HhCCEEEEEccCCCCCCCEEEEeCCHHH
Confidence 99999999999999999999999999888999999999975 34 8999999995 3589999998753
No 275
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.8e-34 Score=318.50 Aligned_cols=215 Identities=25% Similarity=0.319 Sum_probs=173.2
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCC--Cc-eEEEEEEEcC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--GG-YITGNITISG 753 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~--~~-~~~G~i~~~g 753 (1275)
-++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +. ..+|+|.++|
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 71 (252)
T PRK14255 5 IITSSDVHLFYG-------------KFEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRG 71 (252)
T ss_pred eEEEEeEEEEEC-------------CeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcC
Confidence 478999998773 2459999999999999999999999999999999999643 11 2479999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCc----cccccccC
Q 000808 754 YPKKQ-----ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNP----LRQSLVGL 824 (1275)
Q Consensus 754 ~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~----~~~~~~~~ 824 (1275)
.+... ...++.++|++|++.+++ .|+.||+.+....+.. ...+..++.+.+.++.+++.. ..+..
T Consensus 72 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~i~~~~~~~--- 145 (252)
T PRK14255 72 QNIYAPNEDVVQLRKQVGMVFQQPNPFP-FSIYENVIYGLRLAGV--KDKAVLDEAVETSLKQAAIWDEVKDHLHES--- 145 (252)
T ss_pred EEcccccccHHHhcCeEEEEECCCccCC-CcHHHHHHHHHHHcCC--CCHHHHHHHHHHHHHHcCCccchhhHHhcC---
Confidence 87631 134567999999998887 6999999876543211 112223345677888887642 22333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheee
Q 000808 825 PGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMK 904 (1275)
Q Consensus 825 ~~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~ 904 (1275)
...||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++.+ +.|||+++|+++ .+.+.+|++++|+
T Consensus 146 --~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~vsH~~~-~~~~~~d~i~~l~ 221 (252)
T PRK14255 146 --ALSLSGGQQQRVCIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRD-QYTIILVTHSMH-QASRISDKTAFFL 221 (252)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHh-CCEEEEEECCHH-HHHHhCCEEEEEE
Confidence 357999999999999999999999999999999999999999999999865 589999999985 5677899999998
Q ss_pred cCcEEEEECCC
Q 000808 905 RGGQEIYVGPL 915 (1275)
Q Consensus 905 ~gg~~~~~g~~ 915 (1275)
+ |+++..|++
T Consensus 222 ~-G~i~~~~~~ 231 (252)
T PRK14255 222 T-GNLIEFADT 231 (252)
T ss_pred C-CEEEEeCCH
Confidence 5 799998876
No 276
>COG1245 Predicted ATPase, RNase L inhibitor (RLI) homolog [General function prediction only]
Probab=100.00 E-value=9.7e-34 Score=311.99 Aligned_cols=173 Identities=25% Similarity=0.297 Sum_probs=132.4
Q ss_pred eeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCCcccccceEEEeccCCCCCCCCCHHHHHH
Q 000808 706 LNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQETFTRISGYCEQNDIHSPFVTVYESLL 785 (1275)
Q Consensus 706 L~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~~~~~~~~~~v~q~~~~~~~ltv~e~l~ 785 (1275)
|+==.+++..||+++++||||-||||+.++|+|..++ .+|+ .. .-.++|-||--.--...||++-|.
T Consensus 357 L~V~~G~i~~gEvigilGpNgiGKTTFvk~LAG~ikP--deg~----~~-------~~~vSyKPQyI~~~~~gtV~~~l~ 423 (591)
T COG1245 357 LEVEEGEIYDGEVIGILGPNGIGKTTFVKLLAGVIKP--DEGS----EE-------DLKVSYKPQYISPDYDGTVEDLLR 423 (591)
T ss_pred EEecCCeeecceEEEEECCCCcchHHHHHHHhccccC--CCCC----Cc-------cceEeecceeecCCCCCcHHHHHH
Confidence 3334567888999999999999999999999997653 2454 11 123677787644445689999875
Q ss_pred HHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHH
Q 000808 786 YSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAA 865 (1275)
Q Consensus 786 ~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~ 865 (1275)
-...-+...+ -...++.+-|.|.+..+..+ .+|||||.|||+||.+|.+++++++||||++.||.+.+
T Consensus 424 ~~~~~~~~~s-------~~~~ei~~pl~l~~i~e~~v-----~~LSGGELQRvaIaa~L~reADlYllDEPSA~LDvEqR 491 (591)
T COG1245 424 SAIRSAFGSS-------YFKTEIVKPLNLEDLLERPV-----DELSGGELQRVAIAAALSREADLYLLDEPSAYLDVEQR 491 (591)
T ss_pred Hhhhhhcccc-------hhHHhhcCccchHHHHhccc-----ccCCchhHHHHHHHHHhccccCEEEecCchhhccHHHH
Confidence 4432221111 12357888899998888887 47999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhhhhheee
Q 000808 866 AIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDELFLMK 904 (1275)
Q Consensus 866 ~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~ 904 (1275)
..+-+.||+.... ++|.+++-||.-. +--..||+++..
T Consensus 492 ~~vakvIRR~~e~~~kta~vVdHDi~~-~dyvsDr~ivF~ 530 (591)
T COG1245 492 IIVAKVIRRFIENNEKTALVVDHDIYM-IDYVSDRLIVFE 530 (591)
T ss_pred HHHHHHHHHHHhhcCceEEEEecceeh-hhhhhceEEEEe
Confidence 9999999998754 7899999999753 223456666654
No 277
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=2.4e-34 Score=315.19 Aligned_cols=209 Identities=22% Similarity=0.363 Sum_probs=169.8
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 756 (1275)
-++++|+++.+. ++++++|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 7 ~i~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~ 71 (225)
T PRK10247 7 LLQLQNVGYLAG-------------DAKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLIS--PTSGTLLFEGEDI 71 (225)
T ss_pred eEEEeccEEeeC-------------CceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccC--CCCCeEEECCEEc
Confidence 588999998763 2469999999999999999999999999999999999765 3489999999875
Q ss_pred Cc---ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCC-ccccccccCCCCCCCCH
Q 000808 757 KQ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELN-PLRQSLVGLPGESGLST 832 (1275)
Q Consensus 757 ~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~~~~lSg 832 (1275)
.. ..+++.++|++|++.+++ .|++||+.+....+. . . ..+++++++++.+++. ...++.+ ..|||
T Consensus 72 ~~~~~~~~~~~i~~~~q~~~l~~-~tv~enl~~~~~~~~--~-~--~~~~~~~~~l~~~~l~~~~~~~~~-----~~LS~ 140 (225)
T PRK10247 72 STLKPEIYRQQVSYCAQTPTLFG-DTVYDNLIFPWQIRN--Q-Q--PDPAIFLDDLERFALPDTILTKNI-----AELSG 140 (225)
T ss_pred CcCCHHHHHhccEEEeccccccc-ccHHHHHHhHHhhcC--C-C--hHHHHHHHHHHHcCCChHHhcCCc-----ccCCH
Confidence 32 224567899999988887 499999987543321 1 1 1234577899999995 3555554 47999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhhhhheeecCcEEEE
Q 000808 833 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDELFLMKRGGQEIY 911 (1275)
Q Consensus 833 Gerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~ 911 (1275)
|||||++|||+|+.+|++++|||||+|||+.+...+.+.|+++.++ |+|||+++|+++ .+ +.+|++++|.+.+..+.
T Consensus 141 G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~-~~-~~~d~i~~l~~~~~~~~ 218 (225)
T PRK10247 141 GEKQRISLIRNLQFMPKVLLLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKD-EI-NHADKVITLQPHAGEMQ 218 (225)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChH-HH-HhCCEEEEEecccchHh
Confidence 9999999999999999999999999999999999999999998764 899999999986 34 56999999964444454
Q ss_pred EC
Q 000808 912 VG 913 (1275)
Q Consensus 912 ~g 913 (1275)
.|
T Consensus 219 ~~ 220 (225)
T PRK10247 219 EA 220 (225)
T ss_pred hh
Confidence 44
No 278
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.8e-34 Score=320.92 Aligned_cols=216 Identities=19% Similarity=0.235 Sum_probs=174.4
Q ss_pred cEEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCc---eEEEEEEEc
Q 000808 676 HSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITIS 752 (1275)
Q Consensus 676 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~---~~~G~i~~~ 752 (1275)
.-++++|+++.+. ++.+|+|+|+++++||+++|+||||||||||+++|+|..+.. +.+|+|.++
T Consensus 19 ~~l~~~nl~~~~~-------------~~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~ 85 (274)
T PRK14265 19 SVFEVEGVKVFYG-------------GFLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYR 85 (274)
T ss_pred ceEEEeeEEEEeC-------------CeEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEEC
Confidence 4689999998873 235999999999999999999999999999999999974311 247999999
Q ss_pred CccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCc----ccccccc
Q 000808 753 GYPKKQ-----ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNP----LRQSLVG 823 (1275)
Q Consensus 753 g~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~----~~~~~~~ 823 (1275)
|.+... ..+++.++|++|++.+++. |+.||+.+....+. .. ...++.+++.++.+++.. ..+..
T Consensus 86 g~~l~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~~nl~~~~~~~~---~~-~~~~~~~~~~l~~~~l~~~l~~~~~~~-- 158 (274)
T PRK14265 86 DRNIYDSQINSVKLRRQVGMVFQRPNPFPK-SIYENIAFAPRANG---YK-GNLDELVEDSLRRAAIWEEVKDKLKEK-- 158 (274)
T ss_pred CEecccccchhHHHhhcEEEEccCCccccc-cHHHHHHhHHHhcC---ch-HHHHHHHHHHHHHcccchhhHHHhcCC--
Confidence 987532 2345678999999888874 99999987643321 11 122344667788888742 22333
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhhee
Q 000808 824 LPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLM 903 (1275)
Q Consensus 824 ~~~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l 903 (1275)
...||||||||++|||||+.+|++|||||||+|||+.+...+.+.|+++.+ ++|||+++|+++ .+.+.+|++++|
T Consensus 159 ---~~~LSgGq~qrv~LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l 233 (274)
T PRK14265 159 ---GTALSGGQQQRLCIARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKE-QYTIIMVTHNMQ-QASRVADWTAFF 233 (274)
T ss_pred ---cccCCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEEEE
Confidence 357999999999999999999999999999999999999999999999865 689999999986 577889999999
Q ss_pred e--------cCcEEEEECCCC
Q 000808 904 K--------RGGQEIYVGPLG 916 (1275)
Q Consensus 904 ~--------~gg~~~~~g~~~ 916 (1275)
+ +.|+++..|+++
T Consensus 234 ~~~~~~~~~~~G~~~~~g~~~ 254 (274)
T PRK14265 234 NTEIDEYGKRRGKLVEFSPTE 254 (274)
T ss_pred ecccccccccCceEEEeCCHH
Confidence 7 258999999873
No 279
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.4e-34 Score=320.92 Aligned_cols=215 Identities=21% Similarity=0.224 Sum_probs=172.9
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCC--C-ceEEEEEEEcC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYITGNITISG 753 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~--~-~~~~G~i~~~g 753 (1275)
-++++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|..+ + .+.+|+|.++|
T Consensus 24 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g 90 (271)
T PRK14238 24 VFDTQNLNLWYG-------------EDHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRD 90 (271)
T ss_pred EEEEeeeEEEEC-------------CcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECC
Confidence 589999998873 2359999999999999999999999999999999999753 1 13589999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCC----ccccccccC
Q 000808 754 YPKKQ-----ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELN----PLRQSLVGL 824 (1275)
Q Consensus 754 ~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~----~~~~~~~~~ 824 (1275)
.+... ..+++.++|++|++.+++ .|++||+.+....+. ..+.+..++.+.++++.+++. +..+..
T Consensus 91 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~--- 164 (271)
T PRK14238 91 QNIFDKSYSVEELRTNVGMVFQKPNPFP-KSIYDNVTYGPKIHG--IKDKKTLDEIVEKSLRGAAIWDELKDRLHDN--- 164 (271)
T ss_pred EEcccccccHHHHhhhEEEEecCCcccc-ccHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHcCCcchHHHHHhcC---
Confidence 87632 134567999999998887 599999987653321 112222344567777777543 222333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheee
Q 000808 825 PGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMK 904 (1275)
Q Consensus 825 ~~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~ 904 (1275)
...||||||||++|||+|+.+|++|+|||||+|||+.+...+.+.|+++.+ ++|||+++|+++ .+.+.+|++++|+
T Consensus 165 --~~~LSgGe~qrv~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~i~~~~d~i~~l~ 240 (271)
T PRK14238 165 --AYGLSGGQQQRLCIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKK-DYSIIIVTHNMQ-QAARISDKTAFFL 240 (271)
T ss_pred --cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHc-CCEEEEEEcCHH-HHHHhCCEEEEEE
Confidence 357999999999999999999999999999999999999999999999865 799999999975 4667899999998
Q ss_pred cCcEEEEECCC
Q 000808 905 RGGQEIYVGPL 915 (1275)
Q Consensus 905 ~gg~~~~~g~~ 915 (1275)
+ |+++..|+.
T Consensus 241 ~-G~i~~~g~~ 250 (271)
T PRK14238 241 N-GYVNEYDDT 250 (271)
T ss_pred C-CEEEEeCCH
Confidence 6 789999876
No 280
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=4.1e-35 Score=365.81 Aligned_cols=214 Identities=29% Similarity=0.451 Sum_probs=177.9
Q ss_pred CcEEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCc
Q 000808 675 PHSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGY 754 (1275)
Q Consensus 675 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~ 754 (1275)
...++|+|++|.++. ++++|+|+|++++|||++||+||||||||||++.|.|..++ .+|+|.+||.
T Consensus 326 ~~~I~f~~vsf~y~~------------~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~--~~G~I~idg~ 391 (567)
T COG1132 326 IGSIEFENVSFSYPG------------KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDP--TSGEILIDGI 391 (567)
T ss_pred CCeEEEEEEEEEcCC------------CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCC--CCCeEEECCE
Confidence 356999999999852 35799999999999999999999999999999999998763 5899999998
Q ss_pred cCCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCC-------CccccccccC
Q 000808 755 PKKQ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVEL-------NPLRQSLVGL 824 (1275)
Q Consensus 755 ~~~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l-------~~~~~~~~~~ 824 (1275)
+++. ..+++.++||+|++.+|. -|++||+.++. ++.++++ ++++++..++ .+-.|+.+|.
T Consensus 392 dI~~i~~~~lr~~I~~V~Qd~~LF~-~TI~~NI~~g~-----~~at~ee----i~~a~k~a~~~d~I~~lp~g~dt~vge 461 (567)
T COG1132 392 DIRDISLDSLRKRIGIVSQDPLLFS-GTIRENIALGR-----PDATDEE----IEEALKLANAHEFIANLPDGYDTIVGE 461 (567)
T ss_pred ehhhcCHHHHHHhccEEcccceeec-ccHHHHHhcCC-----CCCCHHH----HHHHHHHhChHHHHHhCcccccceecC
Confidence 8754 456788999999999988 79999998763 1233333 3344443332 3346888883
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheee
Q 000808 825 PGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMK 904 (1275)
Q Consensus 825 ~~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~ 904 (1275)
++..||||||||++||||++++|+||+||||||+||+++...+++.++++. +++|+|+++|+++ ....+|+|++|+
T Consensus 462 -~G~~LSgGQrQrlaiARall~~~~ILILDEaTSalD~~tE~~I~~~l~~l~-~~rT~iiIaHRls--ti~~aD~IiVl~ 537 (567)
T COG1132 462 -RGVNLSGGQRQRLAIARALLRNPPILILDEATSALDTETEALIQDALKKLL-KGRTTLIIAHRLS--TIKNADRIIVLD 537 (567)
T ss_pred -CCccCCHHHHHHHHHHHHHhcCCCEEEEeccccccCHHhHHHHHHHHHHHh-cCCEEEEEeccHh--HHHhCCEEEEEE
Confidence 445899999999999999999999999999999999999999999999876 5789999999985 445699999999
Q ss_pred cCcEEEEECCCCc
Q 000808 905 RGGQEIYVGPLGR 917 (1275)
Q Consensus 905 ~gg~~~~~g~~~~ 917 (1275)
+ |+++..|+.++
T Consensus 538 ~-G~i~e~G~h~e 549 (567)
T COG1132 538 N-GRIVERGTHEE 549 (567)
T ss_pred C-CEEEEecCHHH
Confidence 6 78999998743
No 281
>PRK13546 teichoic acids export protein ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-33 Score=315.51 Aligned_cols=219 Identities=20% Similarity=0.258 Sum_probs=176.0
Q ss_pred cEEEEEeEEEEEeccch----hhh---ccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEE
Q 000808 676 HSLTFDEVTYSVDMPKE----MKL---QGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGN 748 (1275)
Q Consensus 676 ~~~~~~~~~~~~~~~~~----~~~---~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~ 748 (1275)
+.+.++|++..++.... .+. ......++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~is~~i~~Ge~~~liG~NGsGKSTLlk~L~Gl~~--p~~G~ 80 (264)
T PRK13546 3 VSVNIKNVTKEYRIYRTNKERMKDALIPKHKNKTFFALDDISLKAYEGDVIGLVGINGSGKSTLSNIIGGSLS--PTVGK 80 (264)
T ss_pred ceEEEeeeEEEEEecccchHHHHHHhhhhccCCceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCceE
Confidence 46788888766654211 110 0112245679999999999999999999999999999999999865 34799
Q ss_pred EEEcCccCCcccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCC
Q 000808 749 ITISGYPKKQETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGES 828 (1275)
Q Consensus 749 i~~~g~~~~~~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~ 828 (1275)
|.++|. +++++|...+.+.+|+.||+.+..... ..+.++..+.++++++.+++.+..+..+ +
T Consensus 81 I~~~g~----------~~~~~~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~ 142 (264)
T PRK13546 81 VDRNGE----------VSVIAISAGLSGQLTGIENIEFKMLCM---GFKRKEIKAMTPKIIEFSELGEFIYQPV-----K 142 (264)
T ss_pred EEECCE----------EeEEecccCCCCCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhcCCc-----c
Confidence 999984 356677776778899999998754332 1233444556778889899987776654 4
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcE
Q 000808 829 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQ 908 (1275)
Q Consensus 829 ~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~ 908 (1275)
.||||||||++||++|+.+|++|+|||||+|||+.+...+.+.|+++.++|+|||+++|++. ++.+.+|++++|.+ |+
T Consensus 143 ~LS~Gq~qrv~Laral~~~p~iLlLDEPt~gLD~~~~~~l~~~L~~~~~~g~tiIiisH~~~-~i~~~~d~i~~l~~-G~ 220 (264)
T PRK13546 143 KYSSGMRAKLGFSINITVNPDILVIDEALSVGDQTFAQKCLDKIYEFKEQNKTIFFVSHNLG-QVRQFCTKIAWIEG-GK 220 (264)
T ss_pred cCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHcCEEEEEEC-CE
Confidence 79999999999999999999999999999999999999999999998777999999999975 56678999999985 78
Q ss_pred EEEECCCC
Q 000808 909 EIYVGPLG 916 (1275)
Q Consensus 909 ~~~~g~~~ 916 (1275)
++..|+.+
T Consensus 221 i~~~g~~~ 228 (264)
T PRK13546 221 LKDYGELD 228 (264)
T ss_pred EEEeCCHH
Confidence 99998864
No 282
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.9e-34 Score=350.12 Aligned_cols=217 Identities=27% Similarity=0.324 Sum_probs=180.4
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 756 (1275)
-++++|++++++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~I~~~g~~i 68 (501)
T PRK11288 4 YLSFDGIGKTFP-------------GVKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQ--PDAGSILIDGQEM 68 (501)
T ss_pred eEEEeeeEEEEC-------------CEEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEEC
Confidence 478899998873 2359999999999999999999999999999999999865 3479999999876
Q ss_pred Cc----ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCH
Q 000808 757 KQ----ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLST 832 (1275)
Q Consensus 757 ~~----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSg 832 (1275)
.. ..+++.++|++|++.+++.+||.||+.+.............+.+++++++++.+|+.+..+..+ ..|||
T Consensus 69 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 143 (501)
T PRK11288 69 RFASTTAALAAGVAIIYQELHLVPEMTVAENLYLGQLPHKGGIVNRRLLNYEAREQLEHLGVDIDPDTPL-----KYLSI 143 (501)
T ss_pred CCCCHHHHHhCCEEEEEechhccCCCCHHHHHHhcccccccCCCCHHHHHHHHHHHHHHcCCCCCcCCch-----hhCCH
Confidence 42 1234678999999989999999999987532111111223344567889999999987666655 46999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcEEEEE
Q 000808 833 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYV 912 (1275)
Q Consensus 833 Gerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~ 912 (1275)
|||||++|||+|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|+++ ++...+|++++|++ |+++..
T Consensus 144 Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiiitHd~~-~~~~~~d~i~~l~~-G~i~~~ 221 (501)
T PRK11288 144 GQRQMVEIAKALARNARVIAFDEPTSSLSAREIEQLFRVIRELRAEGRVILYVSHRME-EIFALCDAITVFKD-GRYVAT 221 (501)
T ss_pred HHHHHHHHHHHHHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEee
Confidence 9999999999999999999999999999999999999999999877999999999986 56788999999986 788876
Q ss_pred CCC
Q 000808 913 GPL 915 (1275)
Q Consensus 913 g~~ 915 (1275)
++.
T Consensus 222 ~~~ 224 (501)
T PRK11288 222 FDD 224 (501)
T ss_pred cCc
Confidence 654
No 283
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=1.7e-34 Score=319.87 Aligned_cols=209 Identities=24% Similarity=0.396 Sum_probs=162.1
Q ss_pred EEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCCc
Q 000808 679 TFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 758 (1275)
Q Consensus 679 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 758 (1275)
+++|+++.+.. +++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~~-----------~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~ 68 (237)
T cd03252 2 TFEHVRFRYKP-----------DGPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYV--PENGRVLVDGHDLAL 68 (237)
T ss_pred EEEEEEEecCC-----------CCccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcC--CCCCEEEECCeehHh
Confidence 57788877631 12469999999999999999999999999999999999865 347999999987532
Q ss_pred ---ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHH-----HHHHHHHHc--CCCccccccccCCCCC
Q 000808 759 ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKM-----FIEEIMELV--ELNPLRQSLVGLPGES 828 (1275)
Q Consensus 759 ---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~-----~~~~~l~~l--~l~~~~~~~~~~~~~~ 828 (1275)
..+++.++|++|++.+++ .||.||+.+... ........+ ..++.++.+ ++....+.. ..
T Consensus 69 ~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~-----~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~-----~~ 137 (237)
T cd03252 69 ADPAWLRRQVGVVLQENVLFN-RSIRDNIALADP-----GMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQ-----GA 137 (237)
T ss_pred cCHHHHhhcEEEEcCCchhcc-chHHHHhhccCC-----CCCHHHHHHHHHHcCcHHHHHhCcccccchhhcC-----CC
Confidence 234567899999987765 699999976421 111111110 112333333 333333332 35
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcE
Q 000808 829 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQ 908 (1275)
Q Consensus 829 ~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~ 908 (1275)
.|||||||||+|||+|+.+|++++|||||+|||+.++..+.+.|+++++ |+|||+++|+++ ++ ..+|++++|++ |+
T Consensus 138 ~LSgG~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~-~~~d~v~~l~~-G~ 213 (237)
T cd03252 138 GLSGGQRQRIAIARALIHNPRILIFDEATSALDYESEHAIMRNMHDICA-GRTVIIIAHRLS-TV-KNADRIIVMEK-GR 213 (237)
T ss_pred cCCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHhcC-CCEEEEEeCCHH-HH-HhCCEEEEEEC-CE
Confidence 7999999999999999999999999999999999999999999999864 899999999986 34 56999999996 79
Q ss_pred EEEECCC
Q 000808 909 EIYVGPL 915 (1275)
Q Consensus 909 ~~~~g~~ 915 (1275)
+++.|+.
T Consensus 214 i~~~~~~ 220 (237)
T cd03252 214 IVEQGSH 220 (237)
T ss_pred EEEEcCH
Confidence 9999986
No 284
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=8.1e-35 Score=308.00 Aligned_cols=192 Identities=23% Similarity=0.332 Sum_probs=168.7
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCccc-------cceEEEeccccccCCCCCHHHHHHHHHh
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFVP-------QRTAAYISQHDVHIGEMTVRETLAFSAR 73 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~~~-------~~~~~yv~Q~~~~~~~lTv~e~l~f~~~ 73 (1275)
+..|||-||||||||+++|.++.+|+ .|+|+++|.++..... ++.+++|+|+-.++|..||.||..|+.+
T Consensus 56 IfViMGLSGSGKSTLvR~~NrLiept---~G~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaLlPhrtVl~Nv~fGLe 132 (386)
T COG4175 56 IFVIMGLSGSGKSTLVRLLNRLIEPT---RGEILVDGKDIAKLSAAELRELRRKKISMVFQSFALLPHRTVLENVAFGLE 132 (386)
T ss_pred EEEEEecCCCCHHHHHHHHhccCCCC---CceEEECCcchhcCCHHHHHHHHhhhhhhhhhhhccccchhHhhhhhccee
Confidence 47899999999999999999999998 9999999999865432 3679999999999999999999999998
Q ss_pred ccCCCCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchh
Q 000808 74 CQGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRV 153 (1275)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv 153 (1275)
+++.+. ++++.+..+.|+..||+...+ +++++|||||||||
T Consensus 133 v~Gv~~----------------------------------~er~~~a~~~l~~VgL~~~~~-----~yp~eLSGGMqQRV 173 (386)
T COG4175 133 VQGVPK----------------------------------AEREERALEALELVGLEGYAD-----KYPNELSGGMQQRV 173 (386)
T ss_pred ecCCCH----------------------------------HHHHHHHHHHHHHcCchhhhh-----cCcccccchHHHHH
Confidence 876431 123334667899999998775 45678999999999
Q ss_pred hHHHHHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhhH
Q 000808 154 TTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELV 233 (1275)
Q Consensus 154 siA~al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~~ 233 (1275)
.|||||+.+|+|||+|||+|+|||--+.+..+.|.++-+..+ +||+.++|+.+|++++.|||.+|++|+|+..|+++|+
T Consensus 174 GLARAla~~~~IlLMDEaFSALDPLIR~~mQdeLl~Lq~~l~-KTIvFitHDLdEAlriG~rIaimkdG~ivQ~Gtp~eI 252 (386)
T COG4175 174 GLARALANDPDILLMDEAFSALDPLIRTEMQDELLELQAKLK-KTIVFITHDLDEALRIGDRIAIMKDGEIVQVGTPEEI 252 (386)
T ss_pred HHHHHHccCCCEEEecCchhhcChHHHHHHHHHHHHHHHHhC-CeEEEEecCHHHHHhccceEEEecCCeEEEeCCHHHH
Confidence 999999999999999999999999999999999988766654 5566689999999999999999999999999999999
Q ss_pred HH
Q 000808 234 LD 235 (1275)
Q Consensus 234 ~~ 235 (1275)
..
T Consensus 253 l~ 254 (386)
T COG4175 253 LL 254 (386)
T ss_pred Hc
Confidence 74
No 285
>cd03230 ABC_DR_subfamily_A This family of ATP-binding proteins belongs to a multisubunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity. In bacteria and archaea, these transporters usually include an ATP-binding protein and one or two integral membrane proteins. Eukaryote systems of the ABCA subfamily display ABC domains that are quite similar to this family. The ATP-binding domain shows the highest similarity between all members of the ABC transporter family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.1e-34 Score=299.91 Aligned_cols=168 Identities=28% Similarity=0.423 Sum_probs=147.9
Q ss_pred EEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCCc
Q 000808 679 TFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 758 (1275)
Q Consensus 679 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 758 (1275)
+++|++++++ .+++|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~--~~G~i~~~g~~~~~ 66 (173)
T cd03230 2 EVRNLSKRYG-------------KKTALDDISLTVEKGEIYGLLGPNGAGKTTLIKIILGLLKP--DSGEIKVLGKDIKK 66 (173)
T ss_pred EEEEEEEEEC-------------CeeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCeEEEECCEEccc
Confidence 5678877663 23599999999999999999999999999999999998653 48999999987543
Q ss_pred --ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHH
Q 000808 759 --ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRK 836 (1275)
Q Consensus 759 --~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerq 836 (1275)
..+++.++|++|++.+++.+|+.||+. |||||||
T Consensus 67 ~~~~~~~~i~~~~q~~~~~~~~tv~~~~~--------------------------------------------LS~G~~q 102 (173)
T cd03230 67 EPEEVKRRIGYLPEEPSLYENLTVRENLK--------------------------------------------LSGGMKQ 102 (173)
T ss_pred chHhhhccEEEEecCCccccCCcHHHHhh--------------------------------------------cCHHHHH
Confidence 234567899999998888899999873 8999999
Q ss_pred HHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecC
Q 000808 837 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRG 906 (1275)
Q Consensus 837 rv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~g 906 (1275)
|++|||+|+.+|++++|||||+|||+.++..+.+.|++++++|.|+|+++|+++ ++.+.+|++++|++|
T Consensus 103 rv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~th~~~-~~~~~~d~i~~l~~g 171 (173)
T cd03230 103 RLALAQALLHDPELLILDEPTSGLDPESRREFWELLRELKKEGKTILLSSHILE-EAERLCDRVAILNNG 171 (173)
T ss_pred HHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHH-HHHHhCCEEEEEeCC
Confidence 999999999999999999999999999999999999999877899999999975 566789999999864
No 286
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.6e-34 Score=319.77 Aligned_cols=214 Identities=20% Similarity=0.258 Sum_probs=172.8
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCC--c-eEEEEEEEcC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--G-YITGNITISG 753 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~--~-~~~G~i~~~g 753 (1275)
.++++|++++++ ++++|+|+|++|++||+++|+||||||||||+++|+|.... . +.+|+|.++|
T Consensus 10 ~l~i~~v~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 76 (264)
T PRK14243 10 VLRTENLNVYYG-------------SFLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHG 76 (264)
T ss_pred EEEEeeeEEEEC-------------CEEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECC
Confidence 488999998773 23599999999999999999999999999999999996431 1 2479999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCc----cccccccC
Q 000808 754 YPKKQ-----ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNP----LRQSLVGL 824 (1275)
Q Consensus 754 ~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~----~~~~~~~~ 824 (1275)
.++.. ...++.++|++|++.+++ .|+.||+.+....+. .. ...+++++++++.+++.+ ..+..
T Consensus 77 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~---~~-~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 148 (264)
T PRK14243 77 KNLYAPDVDPVEVRRRIGMVFQKPNPFP-KSIYDNIAYGARING---YK-GDMDELVERSLRQAALWDEVKDKLKQS--- 148 (264)
T ss_pred EEccccccChHHHhhhEEEEccCCcccc-ccHHHHHHhhhhhcC---cc-hHHHHHHHHHHHHhCchhhHHHHhcCC---
Confidence 87531 233567899999988887 499999987653321 11 123345677788888743 22222
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheee
Q 000808 825 PGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMK 904 (1275)
Q Consensus 825 ~~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~ 904 (1275)
...||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|+++ ++.+.+|++++|+
T Consensus 149 --~~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tvi~vtH~~~-~~~~~~d~v~~l~ 224 (264)
T PRK14243 149 --GLSLSGGQQQRLCIARAIAVQPEVILMDEPCSALDPISTLRIEELMHELKE-QYTIIIVTHNMQ-QAARVSDMTAFFN 224 (264)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEecCHH-HHHHhCCEEEEEe
Confidence 357999999999999999999999999999999999999999999999875 589999999986 5788999999998
Q ss_pred c--------CcEEEEECCC
Q 000808 905 R--------GGQEIYVGPL 915 (1275)
Q Consensus 905 ~--------gg~~~~~g~~ 915 (1275)
+ .|+++..|++
T Consensus 225 ~~~~~~~~~~g~i~~~~~~ 243 (264)
T PRK14243 225 VELTEGGGRYGYLVEFDRT 243 (264)
T ss_pred cccccccccCceEEEeCCH
Confidence 2 4799999986
No 287
>TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK. Members of this family are the PhnK protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated complex. This protein (PhnK) and the adjacent-encoded PhnL resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this complex rather than part of a transporter per se.
Probab=100.00 E-value=8.7e-34 Score=317.25 Aligned_cols=215 Identities=26% Similarity=0.291 Sum_probs=172.6
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCcc-
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP- 755 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~- 755 (1275)
-++++|+++.++ .+.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~ 67 (253)
T TIGR02323 3 LLQVSGLSKSYG-------------GGKGCRDVSFDLYPGEVLGIVGESGSGKSTLLGCLAGRLAP--DHGTATYIMRSG 67 (253)
T ss_pred eEEEeeeEEEeC-------------CceEeecceEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEEecccc
Confidence 378899988763 23589999999999999999999999999999999998653 47999999876
Q ss_pred ----CCc---c----cccceEEEeccCCC--CCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCc-ccccc
Q 000808 756 ----KKQ---E----TFTRISGYCEQNDI--HSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNP-LRQSL 821 (1275)
Q Consensus 756 ----~~~---~----~~~~~~~~v~q~~~--~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~-~~~~~ 821 (1275)
... . ..++.++|++|++. +.+.+|+.|++.+..... . .....+.++.++++++.+++.+ ..++.
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~i~~~~~~~-~-~~~~~~~~~~~~~~l~~l~l~~~~~~~~ 145 (253)
T TIGR02323 68 AELELYQLSEAERRRLMRTEWGFVHQNPRDGLRMRVSAGANIGERLMAI-G-ARHYGNIRAAAHDWLEEVEIDPTRIDDL 145 (253)
T ss_pred cccccccCCHHHHHHhhhcceEEEEeCcccccCccccHHHHHHHHHHHh-c-ccchHHHHHHHHHHHHHcCCChhhhhcC
Confidence 321 1 12345899999974 345679999986542211 1 0111233466789999999963 55555
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhhhh
Q 000808 822 VGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDEL 900 (1275)
Q Consensus 822 ~~~~~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~ 900 (1275)
+ +.||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|||+++|++. .+...+|++
T Consensus 146 ~-----~~LSgG~~qrv~laral~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~vsH~~~-~~~~~~d~~ 219 (253)
T TIGR02323 146 P-----RAFSGGMQQRLQIARNLVTRPRLVFMDEPTGGLDVSVQARLLDLLRGLVRDLGLAVIIVTHDLG-VARLLAQRL 219 (253)
T ss_pred c-----hhcCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEE
Confidence 4 479999999999999999999999999999999999999999999998654 899999999975 566789999
Q ss_pred heeecCcEEEEECCC
Q 000808 901 FLMKRGGQEIYVGPL 915 (1275)
Q Consensus 901 ~~l~~gg~~~~~g~~ 915 (1275)
++|++ |+++..|+.
T Consensus 220 ~~l~~-G~i~~~~~~ 233 (253)
T TIGR02323 220 LVMQQ-GRVVESGLT 233 (253)
T ss_pred EEEEC-CEEEEECCH
Confidence 99986 799999875
No 288
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-33 Score=315.54 Aligned_cols=216 Identities=23% Similarity=0.301 Sum_probs=174.8
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCC--ce--EEEEEEEc
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--GY--ITGNITIS 752 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~--~~--~~G~i~~~ 752 (1275)
.+.++++++++. ++.+|+|+||++++||+++|+||||||||||+++|+|...+ |. +.|++.++
T Consensus 10 ~i~~~~~~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~iaG~~~~~~G~v~~~G~~~~~ 76 (257)
T PRK14246 10 VFNISRLYLYIN-------------DKAILKDITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIEIYDSKIKVDGKVLYF 76 (257)
T ss_pred heeeeeEEEecC-------------CceeEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCcCceeEcCEEEEC
Confidence 488999988763 34699999999999999999999999999999999997542 21 23666666
Q ss_pred CccCCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCc----cccccccCC
Q 000808 753 GYPKKQ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNP----LRQSLVGLP 825 (1275)
Q Consensus 753 g~~~~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~----~~~~~~~~~ 825 (1275)
|.+... ...++.++|++|++.+++.+|++||+.+...... ....++.+++++++++.+++.+ ..+..
T Consensus 77 g~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~---- 150 (257)
T PRK14246 77 GKDIFQIDAIKLRKEVGMVFQQPNPFPHLSIYDNIAYPLKSHG--IKEKREIKKIVEECLRKVGLWKEVYDRLNSP---- 150 (257)
T ss_pred CcccccCCHHHHhcceEEEccCCccCCCCcHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCCCccchhhhcCC----
Confidence 665431 2345678999999999999999999988653321 1123344566889999999964 23333
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeec
Q 000808 826 GESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKR 905 (1275)
Q Consensus 826 ~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~ 905 (1275)
...||+|||||++|||+|+.+|++++|||||+|||+.+...+.+.|+++.+ ++|||+++|+++ .+...+|++++|++
T Consensus 151 -~~~LS~G~~qrl~laral~~~P~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiilvsh~~~-~~~~~~d~v~~l~~ 227 (257)
T PRK14246 151 -ASQLSGGQQQRLTIARALALKPKVLLMDEPTSMIDIVNSQAIEKLITELKN-EIAIVIVSHNPQ-QVARVADYVAFLYN 227 (257)
T ss_pred -cccCCHHHHHHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CcEEEEEECCHH-HHHHhCCEEEEEEC
Confidence 357999999999999999999999999999999999999999999999864 699999999975 46688999999985
Q ss_pred CcEEEEECCC
Q 000808 906 GGQEIYVGPL 915 (1275)
Q Consensus 906 gg~~~~~g~~ 915 (1275)
|+++..|+.
T Consensus 228 -g~i~~~g~~ 236 (257)
T PRK14246 228 -GELVEWGSS 236 (257)
T ss_pred -CEEEEECCH
Confidence 799999976
No 289
>PRK13539 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=4.9e-34 Score=308.51 Aligned_cols=196 Identities=28% Similarity=0.384 Sum_probs=162.8
Q ss_pred EEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCC
Q 000808 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1275)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 757 (1275)
++++|+++.+. ++.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 67 (207)
T PRK13539 3 LEGEDLACVRG-------------GRVLFSGLSFTLAAGEALVLTGPNGSGKTTLLRLIAGLLP--PAAGTIKLDGGDID 67 (207)
T ss_pred EEEEeEEEEEC-------------CeEEEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEeCc
Confidence 67888887763 2359999999999999999999999999999999999865 34799999998753
Q ss_pred cccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHH
Q 000808 758 QETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKR 837 (1275)
Q Consensus 758 ~~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqr 837 (1275)
....++.++|++|++.+++.+|+.||+.+..... ... ++.++++++.+|+.+..+..+ +.||||||||
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~tv~~~l~~~~~~~---~~~----~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qr 135 (207)
T PRK13539 68 DPDVAEACHYLGHRNAMKPALTVAENLEFWAAFL---GGE----ELDIAAALEAVGLAPLAHLPF-----GYLSAGQKRR 135 (207)
T ss_pred chhhHhhcEEecCCCcCCCCCcHHHHHHHHHHhc---CCc----HHHHHHHHHHcCCHHHHcCCh-----hhcCHHHHHH
Confidence 2224567899999988888999999998754332 111 234788999999987666655 4699999999
Q ss_pred HHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhhee
Q 000808 838 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLM 903 (1275)
Q Consensus 838 v~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l 903 (1275)
++|||+|+.+|++++|||||+|||+.+...+.+.|++++++|+|||+++|++. ++ .. |+++.+
T Consensus 136 l~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~-~~-~~~~~~ 198 (207)
T PRK13539 136 VALARLLVSNRPIWILDEPTAALDAAAVALFAELIRAHLAQGGIVIAATHIPL-GL-PG-ARELDL 198 (207)
T ss_pred HHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCch-hh-cc-CcEEee
Confidence 99999999999999999999999999999999999998777999999999975 33 33 777655
No 290
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=1.9e-34 Score=323.30 Aligned_cols=227 Identities=29% Similarity=0.430 Sum_probs=187.8
Q ss_pred CCCcccCCCCcEEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceE
Q 000808 666 KRGMVLPFEPHSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYI 745 (1275)
Q Consensus 666 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~ 745 (1275)
...+.+|.....++++++++..+ ..++++|+|+||.+++||-+||+||||||||||.|+|.|--. +.
T Consensus 323 ~~~m~LP~P~g~L~Ve~l~~~PP-----------g~~~pil~~isF~l~~G~~lgIIGPSgSGKSTLaR~lvG~w~--p~ 389 (580)
T COG4618 323 AERMPLPAPQGALSVERLTAAPP-----------GQKKPILKGISFALQAGEALGIIGPSGSGKSTLARLLVGIWP--PT 389 (580)
T ss_pred cCCCCCCCCCceeeEeeeeecCC-----------CCCCcceecceeEecCCceEEEECCCCccHHHHHHHHHcccc--cC
Confidence 34567777778999999998431 235789999999999999999999999999999999999765 35
Q ss_pred EEEEEEcCccCCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHH-----HHHHHHHHHcCCCcc
Q 000808 746 TGNITISGYPKKQ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQK-----MFIEEIMELVELNPL 817 (1275)
Q Consensus 746 ~G~i~~~g~~~~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~-----~~~~~~l~~l~l~~~ 817 (1275)
+|.|.+||.+.++ +.+-+.+||.||+-.+|+ -||.||+. |...+.+.+..- ..+.|++ +.+.+-
T Consensus 390 ~G~VRLDga~l~qWd~e~lG~hiGYLPQdVeLF~-GTIaeNIa-----Rf~~~~d~~kIieAA~lAgvHelI--l~lP~G 461 (580)
T COG4618 390 SGSVRLDGADLRQWDREQLGRHIGYLPQDVELFD-GTIAENIA-----RFGEEADPEKVIEAARLAGVHELI--LRLPQG 461 (580)
T ss_pred CCcEEecchhhhcCCHHHhccccCcCcccceecC-CcHHHHHH-----hccccCCHHHHHHHHHHcChHHHH--HhCcCC
Confidence 8999999988754 456688999999999887 59999994 333333333211 1233332 456667
Q ss_pred ccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhh
Q 000808 818 RQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESF 897 (1275)
Q Consensus 818 ~~~~~~~~~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~ 897 (1275)
.||.+|..+ ..||||||||+++||||..+|.+++||||-|+||.+....+.+.|.+..++|+|+|+++|+|+ +....
T Consensus 462 YdT~iG~~G-~~LSgGQRQRIaLARAlYG~P~lvVLDEPNsNLD~~GE~AL~~Ai~~~k~rG~~vvviaHRPs--~L~~~ 538 (580)
T COG4618 462 YDTRIGEGG-ATLSGGQRQRIALARALYGDPFLVVLDEPNSNLDSEGEAALAAAILAAKARGGTVVVIAHRPS--ALASV 538 (580)
T ss_pred ccCccCCCC-CCCCchHHHHHHHHHHHcCCCcEEEecCCCCCcchhHHHHHHHHHHHHHHcCCEEEEEecCHH--HHhhc
Confidence 789998654 589999999999999999999999999999999999999999999999989999999999986 67889
Q ss_pred hhhheeecCcEEEEECCCCc
Q 000808 898 DELFLMKRGGQEIYVGPLGR 917 (1275)
Q Consensus 898 d~~~~l~~gg~~~~~g~~~~ 917 (1275)
|+|++|++ |++-.||+.++
T Consensus 539 Dkilvl~~-G~~~~FG~r~e 557 (580)
T COG4618 539 DKILVLQD-GRIAAFGPREE 557 (580)
T ss_pred ceeeeecC-ChHHhcCCHHH
Confidence 99999985 89999999853
No 291
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.4e-34 Score=350.00 Aligned_cols=207 Identities=25% Similarity=0.322 Sum_probs=173.9
Q ss_pred cceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCCcc----cccceEEEeccCCCCCCCC
Q 000808 703 LMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQE----TFTRISGYCEQNDIHSPFV 778 (1275)
Q Consensus 703 ~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~~----~~~~~~~~v~q~~~~~~~l 778 (1275)
+.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+.... ..++.++|++|++.+++.+
T Consensus 11 ~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 88 (491)
T PRK10982 11 VKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQK--DSGSILFQGKEIDFKSSKEALENGISMVHQELNLVLQR 88 (491)
T ss_pred EEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCC--CceEEEECCEECCCCCHHHHHhCCEEEEecccccccCC
Confidence 4699999999999999999999999999999999998653 489999999876421 2345689999999888999
Q ss_pred CHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCC
Q 000808 779 TVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTS 858 (1275)
Q Consensus 779 tv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~~l~~~p~illlDEPts 858 (1275)
||+||+.+..........+.++..++++++++.+++.+..+..+ ..|||||||||+|||+|+.+|++|+|||||+
T Consensus 89 tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgGq~qrv~lA~al~~~p~lllLDEPt~ 163 (491)
T PRK10982 89 SVMDNMWLGRYPTKGMFVDQDKMYRDTKAIFDELDIDIDPRAKV-----ATLSVSQMQMIEIAKAFSYNAKIVIMDEPTS 163 (491)
T ss_pred CHHHHhhcccccccccccCHHHHHHHHHHHHHHcCCCCCccCch-----hhCCHHHHHHHHHHHHHHhCCCEEEEeCCCC
Confidence 99999987532111111123334567889999999987777665 4699999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcEEEEECCCCcc
Q 000808 859 GLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVGPLGRH 918 (1275)
Q Consensus 859 gLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~~~~ 918 (1275)
|||+.++..+.+.|++++++|+|||+++|+++ ++...+|++++|++ |+++..|++.+.
T Consensus 164 ~LD~~~~~~l~~~l~~l~~~g~tvii~tH~~~-~~~~~~d~i~~l~~-G~i~~~~~~~~~ 221 (491)
T PRK10982 164 SLTEKEVNHLFTIIRKLKERGCGIVYISHKME-EIFQLCDEITILRD-GQWIATQPLAGL 221 (491)
T ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEeecChhhC
Confidence 99999999999999999877999999999985 56778999999996 799999987543
No 292
>KOG0062 consensus ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b [Amino acid transport and metabolism; Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=6.7e-34 Score=319.04 Aligned_cols=205 Identities=20% Similarity=0.219 Sum_probs=150.8
Q ss_pred CCcEEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcC
Q 000808 674 EPHSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISG 753 (1275)
Q Consensus 674 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g 753 (1275)
.|..+.+.++++.++.. .-+++.+++..++.-+..+++|+||+||||++|++.|... +..|.+.+.+
T Consensus 359 ~~p~l~i~~V~f~y~p~-----------~y~~~~~~~~d~e~~sRi~~vg~ng~gkst~lKi~~~~l~--~~rgi~~~~~ 425 (582)
T KOG0062|consen 359 SPPNLRISYVAFEYTPS-----------EYQWRKQLGLDRESDSRISRVGENGDGKSTLLKILKGDLT--PTRGIVGRHP 425 (582)
T ss_pred CCCeeEEEeeeccCCCc-----------chhhhhccCCccchhhhhheeccCchhHHHHHHHHhccCC--cccceeeecc
Confidence 35578899998877521 1168899999999999999999999999999999998654 2356655543
Q ss_pred ccCCcccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHH
Q 000808 754 YPKKQETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTE 833 (1275)
Q Consensus 754 ~~~~~~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgG 833 (1275)
+.+++|-.|...-+-.+.|.+ +.+-...+ +.... +.+++-+..+||..-.- .....+||||
T Consensus 426 --------r~ri~~f~Qhhvd~l~~~v~~-vd~~~~~~--pG~~~----ee~r~hl~~~Gl~g~la----~~si~~LSGG 486 (582)
T KOG0062|consen 426 --------RLRIKYFAQHHVDFLDKNVNA-VDFMEKSF--PGKTE----EEIRRHLGSFGLSGELA----LQSIASLSGG 486 (582)
T ss_pred --------cceecchhHhhhhHHHHHhHH-HHHHHHhC--CCCCH----HHHHHHHHhcCCCchhh----hccccccCCc
Confidence 456789988765444444433 22333333 12222 23567788899964321 1113579999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcEEEEEC
Q 000808 834 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVG 913 (1275)
Q Consensus 834 erqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g 913 (1275)
||-||++|.....+|.+|+|||||+.||-++-..+.+.|+.. +..||++||+.+ -+-..|+.+.+..+|.-.-+.|
T Consensus 487 QKsrvafA~~~~~~PhlLVLDEPTNhLD~dsl~AL~~Al~~F---~GGVv~VSHd~~-fi~~~c~E~Wvve~g~vt~ieg 562 (582)
T KOG0062|consen 487 QKSRVAFAACTWNNPHLLVLDEPTNHLDRDSLGALAKALKNF---NGGVVLVSHDEE-FISSLCKELWVVEDGKVTPIEG 562 (582)
T ss_pred chhHHHHHHHhcCCCcEEEecCCCccccHHHHHHHHHHHHhc---CCcEEEEECcHH-HHhhcCceeEEEcCCcEEeeec
Confidence 999999999999999999999999999999999999999876 347999999964 3566889999998754333444
Q ss_pred C
Q 000808 914 P 914 (1275)
Q Consensus 914 ~ 914 (1275)
.
T Consensus 563 ~ 563 (582)
T KOG0062|consen 563 G 563 (582)
T ss_pred c
Confidence 4
No 293
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=3.5e-34 Score=359.69 Aligned_cols=211 Identities=22% Similarity=0.359 Sum_probs=178.4
Q ss_pred cEEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCcc
Q 000808 676 HSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 755 (1275)
Q Consensus 676 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~ 755 (1275)
..++++|++++++ +++++|+|+|++++|||++||+|+||||||||+|+|+|..++ .+|+|.+||.+
T Consensus 339 ~~i~~~~v~f~y~------------~~~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p--~~G~I~idg~~ 404 (592)
T PRK10790 339 GRIDIDNVSFAYR------------DDNLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPL--TEGEIRLDGRP 404 (592)
T ss_pred CeEEEEEEEEEeC------------CCCceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCC--CCceEEECCEE
Confidence 4699999999984 123599999999999999999999999999999999998763 47999999988
Q ss_pred CCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCcc-------ccccccCC
Q 000808 756 KKQ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPL-------RQSLVGLP 825 (1275)
Q Consensus 756 ~~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~-------~~~~~~~~ 825 (1275)
... ..+++.++||+|++.+++. |++||+.++. +.+ +++++++++.+|+.+. .|+.+|..
T Consensus 405 i~~~~~~~l~~~i~~v~Q~~~lF~~-Ti~~NI~~~~------~~~----d~~i~~a~~~~gl~~~i~~lp~Gldt~i~e~ 473 (592)
T PRK10790 405 LSSLSHSVLRQGVAMVQQDPVVLAD-TFLANVTLGR------DIS----EEQVWQALETVQLAELARSLPDGLYTPLGEQ 473 (592)
T ss_pred hhhCCHHHHHhheEEEccCCccccc-hHHHHHHhCC------CCC----HHHHHHHHHHcCcHHHHHhccccccccccCC
Confidence 653 4567889999999999885 9999998752 122 2346778888887643 35556543
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeec
Q 000808 826 GESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKR 905 (1275)
Q Consensus 826 ~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~ 905 (1275)
..+||||||||++|||||+++|+|++||||||+||+++++.+.+.|+++.+ ++|+|+++|+++ ....+|++++|++
T Consensus 474 -g~~LSGGqrQRialARaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~~-~~tvIivtHr~~--~l~~~D~ii~l~~ 549 (592)
T PRK10790 474 -GNNLSVGQKQLLALARVLVQTPQILILDEATANIDSGTEQAIQQALAAVRE-HTTLVVIAHRLS--TIVEADTILVLHR 549 (592)
T ss_pred -CCCCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhC-CCEEEEEecchH--HHHhCCEEEEEEC
Confidence 357999999999999999999999999999999999999999999998764 699999999974 5678999999985
Q ss_pred CcEEEEECCCC
Q 000808 906 GGQEIYVGPLG 916 (1275)
Q Consensus 906 gg~~~~~g~~~ 916 (1275)
|+++..|+.+
T Consensus 550 -G~i~~~G~~~ 559 (592)
T PRK10790 550 -GQAVEQGTHQ 559 (592)
T ss_pred -CEEEEEcCHH
Confidence 8999999863
No 294
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-34 Score=332.97 Aligned_cols=191 Identities=26% Similarity=0.351 Sum_probs=161.6
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCcc-ccceEEEeccccccCCCCCHHHHHHHHHhccCCCC
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV-PQRTAAYISQHDVHIGEMTVRETLAFSARCQGVGS 79 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~~-~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~ 79 (1275)
+++|+|||||||||||++|+|..+|+ +|+|.++|+++.+.. .++.++||+|++.++|.+||+||+.|+.+.++..
T Consensus 32 ~~~llG~sGsGKSTLLr~iaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~v~Q~~~lfp~~tv~eNi~~~~~~~~~~- 107 (356)
T PRK11650 32 FIVLVGPSGCGKSTLLRMVAGLERIT---SGEIWIGGRVVNELEPADRDIAMVFQNYALYPHMSVRENMAYGLKIRGMP- 107 (356)
T ss_pred EEEEECCCCCcHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCccccCCCCHHHHHHhHHhhcCCC-
Confidence 47999999999999999999999987 999999999886533 3478999999999999999999999976532110
Q ss_pred cchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhhHHHHH
Q 000808 80 RYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEMM 159 (1275)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~al 159 (1275)
..+....++++++.+||++..+ +.+++|||||||||+|||||
T Consensus 108 ---------------------------------~~~~~~~~~~~l~~~gL~~~~~-----~~~~~LSgGq~QRvalARAL 149 (356)
T PRK11650 108 ---------------------------------KAEIEERVAEAARILELEPLLD-----RKPRELSGGQRQRVAMGRAI 149 (356)
T ss_pred ---------------------------------HHHHHHHHHHHHHHcCChhHhh-----CChhhCCHHHHHHHHHHHHH
Confidence 0011224567899999976554 45668999999999999999
Q ss_pred hcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhhHH
Q 000808 160 VGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVL 234 (1275)
Q Consensus 160 ~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~~~ 234 (1275)
+.+|++|+||||||+||+.++.++.+.++++.+.. +++++.++|+..++..++|+|++|++|+++..|+++++.
T Consensus 150 ~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~-g~tii~vTHd~~ea~~l~D~i~vl~~G~i~~~g~~~~~~ 223 (356)
T PRK11650 150 VREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRL-KTTSLYVTHDQVEAMTLADRVVVMNGGVAEQIGTPVEVY 223 (356)
T ss_pred hcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEECCHHHHH
Confidence 99999999999999999999999999999876533 456666899999999999999999999999999998874
No 295
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=2.1e-34 Score=361.65 Aligned_cols=214 Identities=23% Similarity=0.307 Sum_probs=178.0
Q ss_pred cEEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCcc
Q 000808 676 HSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 755 (1275)
Q Consensus 676 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~ 755 (1275)
..++++|++|+++. +++++|+|+|++++|||++||+||||||||||+++|+|..++ .+|+|.+||.+
T Consensus 340 ~~i~~~~vsf~y~~-----------~~~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p--~~G~I~i~g~~ 406 (582)
T PRK11176 340 GDIEFRNVTFTYPG-----------KEVPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDI--DEGEILLDGHD 406 (582)
T ss_pred CeEEEEEEEEecCC-----------CCCccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCC--CCceEEECCEE
Confidence 46999999998841 235699999999999999999999999999999999998763 47999999998
Q ss_pred CCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCc-------cccccccCC
Q 000808 756 KKQ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNP-------LRQSLVGLP 825 (1275)
Q Consensus 756 ~~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~-------~~~~~~~~~ 825 (1275)
.+. ..+++.++|++|++.+++ -|++||+.++. +...++ ++++++++..++.+ -.|+.+|..
T Consensus 407 i~~~~~~~~~~~i~~v~Q~~~lf~-~Ti~~Ni~~~~----~~~~~~----~~i~~al~~~~l~~~i~~lp~Gldt~ig~~ 477 (582)
T PRK11176 407 LRDYTLASLRNQVALVSQNVHLFN-DTIANNIAYAR----TEQYSR----EQIEEAARMAYAMDFINKMDNGLDTVIGEN 477 (582)
T ss_pred hhhcCHHHHHhhceEEccCceeec-chHHHHHhcCC----CCCCCH----HHHHHHHHHhCcHHHHHhcccccCceeCCC
Confidence 653 346778999999999886 69999997641 212232 34566777776543 246667654
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeec
Q 000808 826 GESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKR 905 (1275)
Q Consensus 826 ~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~ 905 (1275)
...||||||||++|||||+++|+||+||||||+||++++..+.+.|+++. +++|+|++||+++ ..+.+|+|++|++
T Consensus 478 -g~~LSGGqrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~-~~~tvI~VtHr~~--~~~~~D~Ii~l~~ 553 (582)
T PRK11176 478 -GVLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQ-KNRTSLVIAHRLS--TIEKADEILVVED 553 (582)
T ss_pred -CCcCCHHHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHh-CCCEEEEEecchH--HHHhCCEEEEEEC
Confidence 35799999999999999999999999999999999999999999999875 4799999999974 5788999999986
Q ss_pred CcEEEEECCCC
Q 000808 906 GGQEIYVGPLG 916 (1275)
Q Consensus 906 gg~~~~~g~~~ 916 (1275)
|+++..|+.+
T Consensus 554 -g~i~e~g~~~ 563 (582)
T PRK11176 554 -GEIVERGTHA 563 (582)
T ss_pred -CEEEEeCCHH
Confidence 7999999863
No 296
>PRK09580 sufC cysteine desulfurase ATPase component; Reviewed
Probab=100.00 E-value=1.3e-33 Score=315.21 Aligned_cols=219 Identities=26% Similarity=0.303 Sum_probs=170.4
Q ss_pred EEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCC
Q 000808 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1275)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 757 (1275)
++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|.....+.+|+|.++|.+..
T Consensus 2 i~~~nl~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~ 68 (248)
T PRK09580 2 LSIKDLHVSVE-------------DKAILRGLNLEVRPGEVHAIMGPNGSGKSTLSATLAGREDYEVTGGTVEFKGKDLL 68 (248)
T ss_pred eEEEEEEEEeC-------------CeeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCccCCCCceEEEECCCccc
Confidence 56888888763 23599999999999999999999999999999999997421135899999998754
Q ss_pred cc---c-ccceEEEeccCCCCCCCCCHHHHHHHHHh-ccC--CCC-CCHHHHHHHHHHHHHHcCCC-ccccccccCCCCC
Q 000808 758 QE---T-FTRISGYCEQNDIHSPFVTVYESLLYSAW-LRL--PPE-VDSETQKMFIEEIMELVELN-PLRQSLVGLPGES 828 (1275)
Q Consensus 758 ~~---~-~~~~~~~v~q~~~~~~~ltv~e~l~~~~~-l~~--~~~-~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~~~ 828 (1275)
.. . .++.++|++|++.+++.+|+.+++.+... ++. ... ......+++++++++.+++. +..+..+. +
T Consensus 69 ~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~----~ 144 (248)
T PRK09580 69 ELSPEDRAGEGIFMAFQYPVEIPGVSNQFFLQTALNAVRSYRGQEPLDRFDFQDLMEEKIALLKMPEDLLTRSVN----V 144 (248)
T ss_pred cCCHHHHhhcceEEEecCchhccchhHHHHHHHhhhhhhcccccccchHHHHHHHHHHHHHHcCCChhhcccCCC----C
Confidence 21 1 23468999999988888887777653211 110 000 11222345678889999984 34444431 3
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHh-hhhhheeecCc
Q 000808 829 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFES-FDELFLMKRGG 907 (1275)
Q Consensus 829 ~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~-~d~~~~l~~gg 907 (1275)
.||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|++++++|+|||++||+++ .+... +|++++|++ |
T Consensus 145 ~LS~G~~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~l~~~~~tiii~sH~~~-~~~~~~~d~i~~l~~-g 222 (248)
T PRK09580 145 GFSGGEKKRNDILQMAVLEPELCILDESDSGLDIDALKIVADGVNSLRDGKRSFIIVTHYQR-ILDYIKPDYVHVLYQ-G 222 (248)
T ss_pred CCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHhhhCCEEEEEEC-C
Confidence 69999999999999999999999999999999999999999999998777899999999975 34444 799999985 7
Q ss_pred EEEEECCC
Q 000808 908 QEIYVGPL 915 (1275)
Q Consensus 908 ~~~~~g~~ 915 (1275)
++++.|+.
T Consensus 223 ~i~~~g~~ 230 (248)
T PRK09580 223 RIVKSGDF 230 (248)
T ss_pred eEEEeCCH
Confidence 89999986
No 297
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=4.3e-34 Score=312.95 Aligned_cols=210 Identities=26% Similarity=0.397 Sum_probs=167.8
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 756 (1275)
.++++|+++.+.. .++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +..|+|.++|.+.
T Consensus 2 ~l~~~~l~~~~~~-----------~~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~ 68 (220)
T cd03245 2 RIEFRNVSFSYPN-----------QEIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYK--PTSGSVLLDGTDI 68 (220)
T ss_pred eEEEEEEEEEcCC-----------CCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcC--CCCCeEEECCEEh
Confidence 3678888877631 12459999999999999999999999999999999999865 3479999999875
Q ss_pred Cc---ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCcccccccc------CCCC
Q 000808 757 KQ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVG------LPGE 827 (1275)
Q Consensus 757 ~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~------~~~~ 827 (1275)
.. ...++.++|++|++.+++ .|+.|++.+... ... ++.+.++++.+++.+..+.... ....
T Consensus 69 ~~~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~-----~~~----~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~ 138 (220)
T cd03245 69 RQLDPADLRRNIGYVPQDVTLFY-GTLRDNITLGAP-----LAD----DERILRAAELAGVTDFVNKHPNGLDLQIGERG 138 (220)
T ss_pred HHCCHHHHHhhEEEeCCCCcccc-chHHHHhhcCCC-----CCC----HHHHHHHHHHcCcHHHHHhccccccceecCCC
Confidence 32 223457899999998876 699999876321 111 2235678888888776655331 1123
Q ss_pred CCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCc
Q 000808 828 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGG 907 (1275)
Q Consensus 828 ~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg 907 (1275)
..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|++++++ +|||+++|+++ . .+.+|++++|.+ |
T Consensus 139 ~~LSgG~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~tii~~sH~~~-~-~~~~d~v~~l~~-g 214 (220)
T cd03245 139 RGLSGGQRQAVALARALLNDPPILLLDEPTSAMDMNSEERLKERLRQLLGD-KTLIIITHRPS-L-LDLVDRIIVMDS-G 214 (220)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhcCC-CEEEEEeCCHH-H-HHhCCEEEEEeC-C
Confidence 579999999999999999999999999999999999999999999998764 89999999986 3 478999999986 6
Q ss_pred EEEEEC
Q 000808 908 QEIYVG 913 (1275)
Q Consensus 908 ~~~~~g 913 (1275)
++++.|
T Consensus 215 ~i~~~~ 220 (220)
T cd03245 215 RIVADG 220 (220)
T ss_pred eEeecC
Confidence 777654
No 298
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=1.2e-33 Score=328.96 Aligned_cols=224 Identities=22% Similarity=0.303 Sum_probs=186.4
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCc--eEEEEEEEcCc
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG--YITGNITISGY 754 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~--~~~G~i~~~g~ 754 (1275)
-++++|++.++... .+...+++||||++++||++||+|.|||||||+.++|.|..+.+ ..+|+|.++|.
T Consensus 5 lL~V~nL~v~~~~~---------~~~~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~ 75 (539)
T COG1123 5 LLEVENLTVEFATD---------GGRVPAVRDVSFEVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGR 75 (539)
T ss_pred eEEEeceEEEEecC---------CcceeeeecceEEecCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCc
Confidence 58899998877532 12346999999999999999999999999999999999975533 35799999998
Q ss_pred cCCc-------ccccceEEEeccCCC--CCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCC
Q 000808 755 PKKQ-------ETFTRISGYCEQNDI--HSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLP 825 (1275)
Q Consensus 755 ~~~~-------~~~~~~~~~v~q~~~--~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~ 825 (1275)
+... ..+.+.++|++|++. +.|-+|+.+.+.=...++.+ .+.++..+++.++++.+||.+.... ..
T Consensus 76 dl~~l~~~~~r~~rg~~Ia~i~Q~p~~slnP~~tIg~Qi~E~~~~h~~--~~~~ea~~~a~elL~~Vgl~~~~~~---~~ 150 (539)
T COG1123 76 DLLGLSEREMRKLRGKRIAMIFQDPMTSLNPVMTIGDQIREALRLHGK--GSRAEARKRAVELLEQVGLPDPERR---DR 150 (539)
T ss_pred chhcCCHHHHHHhccccEEEEecCchhhcCchhhHHHHHHHHHHHhcc--ccHHHHHHHHHHHHHHcCCCChhhh---cc
Confidence 6422 123467999999975 55778998888765555542 2367777889999999999876654 22
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhh-CCCEEEEEecCCCHHHHHhhhhhheee
Q 000808 826 GESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFESFDELFLMK 904 (1275)
Q Consensus 826 ~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~~~~l~ 904 (1275)
.+.+|||||||||.||+||+.+|++|++||||++||+.++.+|+++|+++.+ .|.++|++|||+. -+.+.+|++++|.
T Consensus 151 yPheLSGG~rQRv~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~llk~l~~e~g~a~l~ITHDl~-Vva~~aDrv~Vm~ 229 (539)
T COG1123 151 YPHQLSGGMRQRVMIAMALALKPKLLIADEPTTALDVTTQAQILDLLKDLQRELGMAVLFITHDLG-VVAELADRVVVMY 229 (539)
T ss_pred CCcccCchHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHHHHHHHcCcEEEEEcCCHH-HHHHhcCeEEEEE
Confidence 3568999999999999999999999999999999999999999999999975 4999999999986 4778999999999
Q ss_pred cCcEEEEECCCC
Q 000808 905 RGGQEIYVGPLG 916 (1275)
Q Consensus 905 ~gg~~~~~g~~~ 916 (1275)
+ |+++..|+++
T Consensus 230 ~-G~iVE~G~~~ 240 (539)
T COG1123 230 K-GEIVETGPTE 240 (539)
T ss_pred C-CEEEEecCHH
Confidence 6 8999999974
No 299
>PRK03695 vitamin B12-transporter ATPase; Provisional
Probab=100.00 E-value=7.2e-34 Score=315.86 Aligned_cols=198 Identities=24% Similarity=0.364 Sum_probs=168.2
Q ss_pred eeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCCc---ccccceEEEeccCCCCCCCCCHH
Q 000808 705 LLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ---ETFTRISGYCEQNDIHSPFVTVY 781 (1275)
Q Consensus 705 iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~---~~~~~~~~~v~q~~~~~~~ltv~ 781 (1275)
+|+|+|+++++||+++|+||||||||||+++|+|..+ . +|+|.++|.+... ...++.++|++|++.+++.+|++
T Consensus 11 ~l~~vsl~i~~Gei~~l~G~nGsGKSTLl~~l~Gl~~--~-~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~tv~ 87 (248)
T PRK03695 11 RLGPLSAEVRAGEILHLVGPNGAGKSTLLARMAGLLP--G-SGSIQFAGQPLEAWSAAELARHRAYLSQQQTPPFAMPVF 87 (248)
T ss_pred eecceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--C-CeEEEECCEecCcCCHHHHhhheEEecccCccCCCccHH
Confidence 7999999999999999999999999999999999764 2 7999999987642 12345689999998888889999
Q ss_pred HHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhh-------CCcEEEEe
Q 000808 782 ESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKRLTIAVELVA-------NPSIIFMD 854 (1275)
Q Consensus 782 e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~~l~~-------~p~illlD 854 (1275)
||+.+.... .....+..++++++++.+++.+..++.+ +.||||||||++||++|+. +|++++||
T Consensus 88 ~nl~~~~~~----~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~~~~~~p~p~llllD 158 (248)
T PRK03695 88 QYLTLHQPD----KTRTEAVASALNEVAEALGLDDKLGRSV-----NQLSGGEWQRVRLAAVVLQVWPDINPAGQLLLLD 158 (248)
T ss_pred HHHHhcCcc----CCCcHHHHHHHHHHHHHcCCHhHhcCCc-----ccCCHHHHHHHHHHHHHhccccccCCCCCEEEEc
Confidence 999875321 1122333556889999999987766665 4699999999999999998 67999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcEEEEECCCC
Q 000808 855 EPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVGPLG 916 (1275)
Q Consensus 855 EPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~~ 916 (1275)
|||+|||+.++..+.+.|++++++|+|||+++|+++ ++...+|++++|++ |+++..|+.+
T Consensus 159 EPt~~LD~~~~~~l~~~L~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~-G~i~~~g~~~ 218 (248)
T PRK03695 159 EPMNSLDVAQQAALDRLLSELCQQGIAVVMSSHDLN-HTLRHADRVWLLKQ-GKLLASGRRD 218 (248)
T ss_pred CCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEECCHH
Confidence 999999999999999999998777899999999975 57789999999986 7999998763
No 300
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.2e-34 Score=308.89 Aligned_cols=191 Identities=26% Similarity=0.368 Sum_probs=163.0
Q ss_pred EEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCC----CccccceEEEecccc-ccCCCCCHHHHHHHHHhccC
Q 000808 2 TLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMD----EFVPQRTAAYISQHD-VHIGEMTVRETLAFSARCQG 76 (1275)
Q Consensus 2 ~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~----~~~~~~~~~yv~Q~~-~~~~~lTv~e~l~f~~~~~~ 76 (1275)
++|+||||||||||+++|+|.+.|. +|.|.++|.+.. ....++.+|||+|++ ..+...||.|.+.|+.+..+
T Consensus 33 ~~i~G~nGsGKSTL~~~l~GLl~p~---~G~v~~~g~~~~~~~~~~~~~~~vG~VfQnpd~q~~~~tV~~evafg~~n~g 109 (235)
T COG1122 33 VLLIGPNGSGKSTLLKLLNGLLKPT---SGEVLVDGLDTSSEKSLLELRQKVGLVFQNPDDQLFGPTVEDEVAFGLENLG 109 (235)
T ss_pred EEEECCCCCCHHHHHHHHcCcCcCC---CCEEEECCeeccchhhHHHhhcceEEEEECcccccccCcHHHHHhhchhhcC
Confidence 7899999999999999999999997 899999999865 234568899999984 45667799999999887654
Q ss_pred CCCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhhHH
Q 000808 77 VGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTG 156 (1275)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA 156 (1275)
... ++...++++.++.+||.+..+ +.+..|||||||||+||
T Consensus 110 ~~~----------------------------------~e~~~rv~~~l~~vgl~~~~~-----r~p~~LSGGqkqRvaIA 150 (235)
T COG1122 110 LPR----------------------------------EEIEERVAEALELVGLEELLD-----RPPFNLSGGQKQRVAIA 150 (235)
T ss_pred CCH----------------------------------HHHHHHHHHHHHHcCchhhcc-----CCccccCCcceeeHHhh
Confidence 321 112345778899999987754 55678999999999999
Q ss_pred HHHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhhHHH
Q 000808 157 EMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVLD 235 (1275)
Q Consensus 157 ~al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~~~~ 235 (1275)
.+|+.+|++++|||||||||+..+.++++.++++... ++.++++++|+.+.+..++|++++|++|+++++|++.++.+
T Consensus 151 ~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~-~~~tii~~tHd~~~~~~~ad~v~vl~~G~i~~~g~p~~i~~ 228 (235)
T COG1122 151 GVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEE-GGKTIIIVTHDLELVLEYADRVVVLDDGKILADGDPAEIFN 228 (235)
T ss_pred HHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhc-CCCeEEEEeCcHHHHHhhCCEEEEEECCEEeecCCHHHHhh
Confidence 9999999999999999999999999999999998654 35566678999999999999999999999999999877654
No 301
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.2e-34 Score=330.87 Aligned_cols=191 Identities=24% Similarity=0.357 Sum_probs=162.2
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCccc-cceEEEeccccccCCCCCHHHHHHHHHhccCCCC
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFVP-QRTAAYISQHDVHIGEMTVRETLAFSARCQGVGS 79 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~~~-~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~ 79 (1275)
+++|+|||||||||||++|+|+.+|+ +|+|.++|+++..... ++.++||+|+..+||.+||.||+.|+.+.++..
T Consensus 34 ~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~vfQ~~~lfp~~tv~eNi~~~l~~~~~~- 109 (351)
T PRK11432 34 MVTLLGPSGCGKTTVLRLVAGLEKPT---EGQIFIDGEDVTHRSIQQRDICMVFQSYALFPHMSLGENVGYGLKMLGVP- 109 (351)
T ss_pred EEEEECCCCCcHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCcccCCCCCHHHHHHHHHhHcCCC-
Confidence 47999999999999999999999987 9999999998865433 478999999999999999999999986543211
Q ss_pred cchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhhHHHHH
Q 000808 80 RYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEMM 159 (1275)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~al 159 (1275)
..+....++++++.+||.+.. ++.++.|||||||||+|||||
T Consensus 110 ---------------------------------~~~~~~~v~~~l~~~gl~~~~-----~r~~~~LSgGq~QRVaLARaL 151 (351)
T PRK11432 110 ---------------------------------KEERKQRVKEALELVDLAGFE-----DRYVDQISGGQQQRVALARAL 151 (351)
T ss_pred ---------------------------------HHHHHHHHHHHHHHcCCchhh-----cCChhhCCHHHHHHHHHHHHH
Confidence 001122456788899997654 455678999999999999999
Q ss_pred hcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhhHH
Q 000808 160 VGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVL 234 (1275)
Q Consensus 160 ~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~~~ 234 (1275)
+.+|++|||||||+|||+.++.++.+.|+++.+.. +++++.++|+.+++..++|+|++|++|+++..|+++++.
T Consensus 152 ~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~-g~tii~vTHd~~e~~~laD~i~vm~~G~i~~~g~~~~~~ 225 (351)
T PRK11432 152 ILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQF-NITSLYVTHDQSEAFAVSDTVIVMNKGKIMQIGSPQELY 225 (351)
T ss_pred HcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 99999999999999999999999999999876543 455666899999999999999999999999999998874
No 302
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-33 Score=314.79 Aligned_cols=219 Identities=22% Similarity=0.274 Sum_probs=174.8
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCC--C-ceEEEEEEEcC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYITGNITISG 753 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~--~-~~~~G~i~~~g 753 (1275)
.++++|+++.+. ++.+|+|+|+++++||+++|+||||||||||+++|+|... + .+.+|+|.+||
T Consensus 3 ~l~~~~v~~~~~-------------~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 69 (250)
T PRK14266 3 RIEVENLNTYFD-------------DAHILKNVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDG 69 (250)
T ss_pred EEEEEeEEEEeC-------------CeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECC
Confidence 377889988763 2459999999999999999999999999999999999643 1 12579999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCC
Q 000808 754 YPKKQ-----ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGES 828 (1275)
Q Consensus 754 ~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~ 828 (1275)
.++.. ...++.++|++|++.+++. |+.||+.+...... ..+.+..++++.++++.+++.+...... +....
T Consensus 70 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~~-t~~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~-~~~~~ 145 (250)
T PRK14266 70 VDIYDPAVDVVELRKKVGMVFQKPNPFPK-SIFDNVAYGLRIHG--EDDEDFIEERVEESLKAAALWDEVKDKL-DKSAL 145 (250)
T ss_pred EEcccccccHHHHhhheEEEecCCccCcc-hHHHHHHhHHhhcC--CCCHHHHHHHHHHHHHHcCCchhHHHHH-hCCcc
Confidence 87542 1235679999999988875 99999987643221 1123334566788899998854211111 11235
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcE
Q 000808 829 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQ 908 (1275)
Q Consensus 829 ~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~ 908 (1275)
.||||||||++|||+|+.+|++++|||||+|||+.+...+.+.|+++++ ++|||+++|++. ++.+.+|++++|.+ |+
T Consensus 146 ~LS~Gq~qrv~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~-~~tiii~sh~~~-~~~~~~~~i~~l~~-G~ 222 (250)
T PRK14266 146 GLSGGQQQRLCIARTIAVSPEVILMDEPCSALDPISTTKIEDLIHKLKE-DYTIVIVTHNMQ-QATRVSKYTSFFLN-GE 222 (250)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEECCHH-HHHhhcCEEEEEEC-Ce
Confidence 7999999999999999999999999999999999999999999999864 799999999986 57788899999985 79
Q ss_pred EEEECCC
Q 000808 909 EIYVGPL 915 (1275)
Q Consensus 909 ~~~~g~~ 915 (1275)
+++.|++
T Consensus 223 i~~~g~~ 229 (250)
T PRK14266 223 IIESGLT 229 (250)
T ss_pred EEEeCCH
Confidence 9999986
No 303
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=1.3e-34 Score=370.93 Aligned_cols=211 Identities=27% Similarity=0.389 Sum_probs=176.1
Q ss_pred cEEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCcc
Q 000808 676 HSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 755 (1275)
Q Consensus 676 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~ 755 (1275)
..++++|++|+|+. .++++|+|+|++|+|||.+||+||||||||||+|+|+|..+ +.+|+|.+||.+
T Consensus 476 ~~I~~~~vsf~y~~-----------~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~--p~~G~I~idg~~ 542 (710)
T TIGR03796 476 GYVELRNITFGYSP-----------LEPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQ--PWSGEILFDGIP 542 (710)
T ss_pred CeEEEEEEEEecCC-----------CCCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEe
Confidence 46999999999852 23469999999999999999999999999999999999876 348999999998
Q ss_pred CCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCcc-------ccccccCC
Q 000808 756 KKQ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPL-------RQSLVGLP 825 (1275)
Q Consensus 756 ~~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~-------~~~~~~~~ 825 (1275)
.+. ..+++.+|||+|++.+++ .|++||+.++. + +.++ +.+.++++..++.+. .|+.+|..
T Consensus 543 i~~~~~~~lr~~i~~v~Q~~~lf~-gTi~eNi~l~~----~-~~~~----~~i~~al~~~~l~~~i~~lp~gl~t~i~e~ 612 (710)
T TIGR03796 543 REEIPREVLANSVAMVDQDIFLFE-GTVRDNLTLWD----P-TIPD----ADLVRACKDAAIHDVITSRPGGYDAELAEG 612 (710)
T ss_pred HHHCCHHHHHhheeEEecCChhhh-ccHHHHhhCCC----C-CCCH----HHHHHHHHHhCCHHHHHhCcCcccceeccC
Confidence 643 356788999999998885 59999997531 1 2222 335667777776543 35566643
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeec
Q 000808 826 GESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKR 905 (1275)
Q Consensus 826 ~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~ 905 (1275)
..+||||||||++|||||+++|+||+||||||+||+.++..+.+.|++ .++|+|+++|+++ ....+|++++|++
T Consensus 613 -G~~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~---~~~T~IiitHrl~--~i~~~D~Iivl~~ 686 (710)
T TIGR03796 613 -GANLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR---RGCTCIIVAHRLS--TIRDCDEIIVLER 686 (710)
T ss_pred -CCCCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh---cCCEEEEEecCHH--HHHhCCEEEEEeC
Confidence 468999999999999999999999999999999999999999999986 4899999999975 5677999999986
Q ss_pred CcEEEEECCCC
Q 000808 906 GGQEIYVGPLG 916 (1275)
Q Consensus 906 gg~~~~~g~~~ 916 (1275)
|+++..|+.+
T Consensus 687 -G~i~~~G~~~ 696 (710)
T TIGR03796 687 -GKVVQRGTHE 696 (710)
T ss_pred -CEEEEecCHH
Confidence 7999999863
No 304
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=2.3e-34 Score=358.20 Aligned_cols=213 Identities=27% Similarity=0.421 Sum_probs=178.8
Q ss_pred cEEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCcc
Q 000808 676 HSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 755 (1275)
Q Consensus 676 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~ 755 (1275)
..++++|++++++. +++++|+|+|++++|||++||+||||||||||+++|+|..+ +.+|+|.+||.+
T Consensus 337 ~~i~~~~v~f~y~~-----------~~~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~--p~~G~I~i~g~~ 403 (574)
T PRK11160 337 VSLTLNNVSFTYPD-----------QPQPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWD--PQQGEILLNGQP 403 (574)
T ss_pred CeEEEEEEEEECCC-----------CCCcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEE
Confidence 47999999999841 12469999999999999999999999999999999999876 348999999998
Q ss_pred CCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccc------cccccCCC
Q 000808 756 KKQ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLR------QSLVGLPG 826 (1275)
Q Consensus 756 ~~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~------~~~~~~~~ 826 (1275)
.+. ..+++.++||+|++.+++ .|++||+.++. + +.+ ++.++++++.+++.+.. |+.+|..
T Consensus 404 i~~~~~~~~r~~i~~v~Q~~~lf~-~ti~~Ni~~~~----~-~~~----~~~i~~al~~~~l~~~i~~p~GldT~vge~- 472 (574)
T PRK11160 404 IADYSEAALRQAISVVSQRVHLFS-ATLRDNLLLAA----P-NAS----DEALIEVLQQVGLEKLLEDDKGLNAWLGEG- 472 (574)
T ss_pred hhhCCHHHHHhheeEEcccchhhc-ccHHHHhhcCC----C-ccC----HHHHHHHHHHcCCHHHHcCccccCchhcCC-
Confidence 653 356778999999998886 59999997752 1 222 34577888888887653 4555543
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecC
Q 000808 827 ESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRG 906 (1275)
Q Consensus 827 ~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~g 906 (1275)
...||||||||++|||||+++|++|+||||||+||+.++..+.+.|+++. +++|+|+++|+++ ....+|++++|++
T Consensus 473 g~~LSgGqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~-~~~tviiitHr~~--~~~~~d~i~~l~~- 548 (574)
T PRK11160 473 GRQLSGGEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHA-QNKTVLMITHRLT--GLEQFDRICVMDN- 548 (574)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecChh--HHHhCCEEEEEeC-
Confidence 45799999999999999999999999999999999999999999999875 4899999999986 4567999999986
Q ss_pred cEEEEECCCC
Q 000808 907 GQEIYVGPLG 916 (1275)
Q Consensus 907 g~~~~~g~~~ 916 (1275)
|+++..|+.+
T Consensus 549 G~i~~~g~~~ 558 (574)
T PRK11160 549 GQIIEQGTHQ 558 (574)
T ss_pred CeEEEeCCHH
Confidence 7999999863
No 305
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=3.7e-34 Score=329.93 Aligned_cols=192 Identities=20% Similarity=0.310 Sum_probs=162.1
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCccc-------cceEEEeccccccCCCCCHHHHHHHHHh
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFVP-------QRTAAYISQHDVHIGEMTVRETLAFSAR 73 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~~~-------~~~~~yv~Q~~~~~~~lTv~e~l~f~~~ 73 (1275)
+++|+|||||||||||++|+|+++|+ +|+|.++|.++..... ++.++||+|++.+++.+||+||+.|+.+
T Consensus 21 i~~l~G~sGsGKSTLLr~L~Gl~~p~---~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l~~~~TV~eNi~~~~~ 97 (363)
T TIGR01186 21 IFVIMGLSGSGKSTTVRMLNRLIEPT---AGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFALFPHMTILQNTSLGPE 97 (363)
T ss_pred EEEEECCCCChHHHHHHHHhCCCCCC---ceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcCCCCCCHHHHHHHHHH
Confidence 47999999999999999999999987 9999999998865432 5689999999999999999999999765
Q ss_pred ccCCCCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchh
Q 000808 74 CQGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRV 153 (1275)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv 153 (1275)
+.+.. ..+....+.++++.+||++..+ +.+..|||||||||
T Consensus 98 ~~~~~----------------------------------~~~~~~~~~~~l~~vgL~~~~~-----~~p~~LSGGq~QRV 138 (363)
T TIGR01186 98 LLGWP----------------------------------EQERKEKALELLKLVGLEEYEH-----RYPDELSGGMQQRV 138 (363)
T ss_pred HcCCC----------------------------------HHHHHHHHHHHHHhcCCchhhh-----CChhhCCHHHHHHH
Confidence 43210 0011223567889999976544 45668999999999
Q ss_pred hHHHHHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhhH
Q 000808 154 TTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELV 233 (1275)
Q Consensus 154 siA~al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~~ 233 (1275)
+|||||+.+|+|+||||||+|||+.++.++.+.++++.+.. +.+|+.++|+.+++..++|+|++|++|+++..|+++++
T Consensus 139 ~lARAL~~~p~iLLlDEP~saLD~~~r~~l~~~l~~l~~~~-~~Tii~vTHd~~ea~~~~drI~vl~~G~iv~~g~~~ei 217 (363)
T TIGR01186 139 GLARALAAEPDILLMDEAFSALDPLIRDSMQDELKKLQATL-QKTIVFITHDLDEAIRIGDRIVIMKAGEIVQVGTPDEI 217 (363)
T ss_pred HHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEeCCEEEeeCCHHHH
Confidence 99999999999999999999999999999999999875433 45666689999999999999999999999999999887
Q ss_pred HH
Q 000808 234 LD 235 (1275)
Q Consensus 234 ~~ 235 (1275)
..
T Consensus 218 ~~ 219 (363)
T TIGR01186 218 LR 219 (363)
T ss_pred Hh
Confidence 53
No 306
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.9e-34 Score=317.45 Aligned_cols=209 Identities=26% Similarity=0.351 Sum_probs=163.9
Q ss_pred EEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCCc
Q 000808 679 TFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 758 (1275)
Q Consensus 679 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 758 (1275)
+++|++++++. .++.+++|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~~-----------~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~ 68 (234)
T cd03251 2 EFKNVTFRYPG-----------DGPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYD--VDSGRILIDGHDVRD 68 (234)
T ss_pred EEEEEEEEeCC-----------CCccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcccc--CCCCEEEECCEEhhh
Confidence 57788777631 11359999999999999999999999999999999999865 348999999986532
Q ss_pred ---ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHH-----HHHHHHHHc--CCCccccccccCCCCC
Q 000808 759 ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKM-----FIEEIMELV--ELNPLRQSLVGLPGES 828 (1275)
Q Consensus 759 ---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~-----~~~~~l~~l--~l~~~~~~~~~~~~~~ 828 (1275)
...++.++|++|++.+++ .|++||+.+.... .......+ .+++.++.+ ++.+..+.. ..
T Consensus 69 ~~~~~~~~~i~~~~q~~~~~~-~tv~enl~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-----~~ 137 (234)
T cd03251 69 YTLASLRRQIGLVSQDVFLFN-DTVAENIAYGRPG-----ATREEVEEAARAANAHEFIMELPEGYDTVIGER-----GV 137 (234)
T ss_pred CCHHHHHhhEEEeCCCCeecc-ccHHHHhhccCCC-----CCHHHHHHHHHHcCcHHHHHhcccCcceeeccC-----CC
Confidence 233567899999988876 6999999764321 11111111 234445544 454444433 35
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcE
Q 000808 829 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQ 908 (1275)
Q Consensus 829 ~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~ 908 (1275)
.||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++.+ ++|||+++|+++ ++ ..+|++++|.+ |+
T Consensus 138 ~LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~-~~tii~~sh~~~-~~-~~~d~v~~l~~-G~ 213 (234)
T cd03251 138 KLSGGQRQRIAIARALLKDPPILILDEATSALDTESERLVQAALERLMK-NRTTFVIAHRLS-TI-ENADRIVVLED-GK 213 (234)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhcC-CCEEEEEecCHH-HH-hhCCEEEEecC-Ce
Confidence 7999999999999999999999999999999999999999999999864 899999999986 34 45999999996 68
Q ss_pred EEEECCC
Q 000808 909 EIYVGPL 915 (1275)
Q Consensus 909 ~~~~g~~ 915 (1275)
++..|+.
T Consensus 214 i~~~~~~ 220 (234)
T cd03251 214 IVERGTH 220 (234)
T ss_pred EeeeCCH
Confidence 8888875
No 307
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=3.8e-34 Score=331.20 Aligned_cols=192 Identities=21% Similarity=0.323 Sum_probs=162.3
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCcee--EEEEECCccCCCccc-cceEEEeccccccCCCCCHHHHHHHHHhccCC
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFS--GRVTYNGHGMDEFVP-QRTAAYISQHDVHIGEMTVRETLAFSARCQGV 77 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~--G~v~~~g~~~~~~~~-~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~ 77 (1275)
+++|+|||||||||||++|+|..+|+ + |+|.++|+++..... ++.++||+|+..+++.+||+||+.|+.+.++.
T Consensus 33 ~~~llGpsGsGKSTLLr~iaGl~~p~---~~~G~i~~~g~~~~~~~~~~r~ig~vfQ~~~l~p~~tv~enl~~~l~~~~~ 109 (362)
T TIGR03258 33 LLALIGKSGCGKTTLLRAIAGFVKAA---GLTGRIAIADRDLTHAPPHKRGLALLFQNYALFPHLKVEDNVAFGLRAQKM 109 (362)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CCCEEEEECCEECCCCCHHHCCEEEEECCcccCCCCcHHHHHHHHHHHcCC
Confidence 47999999999999999999999987 7 999999998764332 46799999999999999999999998653321
Q ss_pred CCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhhHHH
Q 000808 78 GSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGE 157 (1275)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~ 157 (1275)
. ..+.+..++++++.+||++..+ +.+++|||||||||+|||
T Consensus 110 ~----------------------------------~~~~~~~v~~~l~~~gL~~~~~-----~~~~~LSgGq~QRvaLAR 150 (362)
T TIGR03258 110 P----------------------------------KADIAERVADALKLVGLGDAAA-----HLPAQLSGGMQQRIAIAR 150 (362)
T ss_pred C----------------------------------HHHHHHHHHHHHHhcCCCchhh-----CChhhCCHHHHHHHHHHH
Confidence 0 0011224567899999986654 456689999999999999
Q ss_pred HHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhhHH
Q 000808 158 MMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVL 234 (1275)
Q Consensus 158 al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~~~ 234 (1275)
||+.+|++|+|||||+|||+.++.++.+.|+++.+..++++++.++|+.+++..++|+|++|++|+++..|+++++.
T Consensus 151 AL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G~i~~~g~~~~~~ 227 (362)
T TIGR03258 151 AIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDGRLAAHGEPQALY 227 (362)
T ss_pred HHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 99999999999999999999999999999998765432556677899999999999999999999999999998874
No 308
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=4.6e-34 Score=330.31 Aligned_cols=192 Identities=24% Similarity=0.371 Sum_probs=162.6
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCcc-ccceEEEeccccccCCCCCHHHHHHHHHhccCCCC
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV-PQRTAAYISQHDVHIGEMTVRETLAFSARCQGVGS 79 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~~-~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~ 79 (1275)
+++|+|||||||||||++|+|..+|+ +|+|.++|+++.... .++.++||+|+..+||.+||+||+.|+.+.++..
T Consensus 32 ~~~l~GpsGsGKSTLLr~iaGl~~p~---~G~I~i~g~~~~~~~~~~r~ig~v~Q~~~lfp~~tv~eNi~~~~~~~~~~- 107 (353)
T TIGR03265 32 FVCLLGPSGCGKTTLLRIIAGLERQT---AGTIYQGGRDITRLPPQKRDYGIVFQSYALFPNLTVADNIAYGLKNRGMG- 107 (353)
T ss_pred EEEEECCCCCCHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCcccCCCCcHHHHHHHHHHhcCCC-
Confidence 47999999999999999999999987 999999999886533 3478999999999999999999999976532110
Q ss_pred cchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhhHHHHH
Q 000808 80 RYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEMM 159 (1275)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~al 159 (1275)
..+.+..++++++.+||++..+ +.+++|||||||||+|||||
T Consensus 108 ---------------------------------~~~~~~~~~~~l~~l~L~~~~~-----~~~~~LSgGq~QRvaLARaL 149 (353)
T TIGR03265 108 ---------------------------------RAEVAERVAELLDLVGLPGSER-----KYPGQLSGGQQQRVALARAL 149 (353)
T ss_pred ---------------------------------HHHHHHHHHHHHHHcCCCchhh-----CChhhCCHHHHHHHHHHHHH
Confidence 0011224677899999987654 45678999999999999999
Q ss_pred hcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhhHHH
Q 000808 160 VGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVLD 235 (1275)
Q Consensus 160 ~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~~~~ 235 (1275)
+.+|+++|||||||+||+.++.++.+.|+++.+.. +.+++.++|+.+++..++|+|++|++|++++.|+++++.+
T Consensus 150 ~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~-~~tvi~vTHd~~ea~~l~d~i~vl~~G~i~~~g~~~~~~~ 224 (353)
T TIGR03265 150 ATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRL-GVTTIMVTHDQEEALSMADRIVVMNHGVIEQVGTPQEIYR 224 (353)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 99999999999999999999999999999876543 4556668899999999999999999999999999988753
No 309
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=4.7e-34 Score=327.51 Aligned_cols=191 Identities=22% Similarity=0.311 Sum_probs=160.8
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCcc------ccceEEEeccccccCCCCCHHHHHHHHHhc
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV------PQRTAAYISQHDVHIGEMTVRETLAFSARC 74 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~~------~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~ 74 (1275)
+++|+||||||||||+++|+|+.+|+ +|+|.++|.++.... .++.++|++|+..+++..||+||+.++...
T Consensus 33 i~gIiG~sGaGKSTLlr~I~gl~~p~---~G~I~i~G~~i~~~~~~~l~~~r~~Ig~v~Q~~~l~~~~tv~eni~~~~~~ 109 (343)
T TIGR02314 33 IYGVIGASGAGKSTLIRCVNLLERPT---SGSVIVDGQDLTTLSNSELTKARRQIGMIFQHFNLLSSRTVFGNVALPLEL 109 (343)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHHHhcCEEEEECCccccccCcHHHHHHHHHHH
Confidence 47999999999999999999999987 999999999886532 246799999999999999999999987643
Q ss_pred cCCCCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhh
Q 000808 75 QGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVT 154 (1275)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvs 154 (1275)
.+.. ..+....+.++++.+||++..| +.+..|||||||||+
T Consensus 110 ~~~~----------------------------------~~~~~~~v~e~l~~vgL~~~~~-----~~~~~LSgGqkQRV~ 150 (343)
T TIGR02314 110 DNTP----------------------------------KDEIKRKVTELLALVGLGDKHD-----SYPSNLSGGQKQRVA 150 (343)
T ss_pred cCCC----------------------------------HHHHHHHHHHHHHHcCCchhhh-----CChhhCCHHHHHHHH
Confidence 2210 0011123567889999987655 456689999999999
Q ss_pred HHHHHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhhHH
Q 000808 155 TGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVL 234 (1275)
Q Consensus 155 iA~al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~~~ 234 (1275)
|||||+.+|++|+|||||||||+.++.++++.|+++.+.. +.+|+.++|..+.+.++||+|++|++|++++.|+++++.
T Consensus 151 IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~-g~tiiliTH~~~~v~~~~d~v~vl~~G~iv~~g~~~~v~ 229 (343)
T TIGR02314 151 IARALASNPKVLLCDEATSALDPATTQSILELLKEINRRL-GLTILLITHEMDVVKRICDCVAVISNGELIEQGTVSEIF 229 (343)
T ss_pred HHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 9999999999999999999999999999999999986543 455666899999999999999999999999999988874
No 310
>PRK13540 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=1.6e-33 Score=302.99 Aligned_cols=194 Identities=24% Similarity=0.312 Sum_probs=162.1
Q ss_pred EEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCC
Q 000808 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1275)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 757 (1275)
+.++|+++++. ++++|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~v~~~g~~~~ 66 (200)
T PRK13540 2 LDVIELDFDYH-------------DQPLLQQISFHLPAGGLLHLKGSNGAGKTTLLKLIAGLLN--PEKGEILFERQSIK 66 (200)
T ss_pred EEEEEEEEEeC-------------CeeEEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCeeEEECCCccc
Confidence 56788887763 2459999999999999999999999999999999999865 35899999998764
Q ss_pred c--ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHH
Q 000808 758 Q--ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQR 835 (1275)
Q Consensus 758 ~--~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGer 835 (1275)
. ..+++.++|++|+..+++.+||+||+.+..... .. +..++++++.+++.+..+..+ ..||||||
T Consensus 67 ~~~~~~~~~i~~~~q~~~~~~~~tv~~~~~~~~~~~------~~--~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~ 133 (200)
T PRK13540 67 KDLCTYQKQLCFVGHRSGINPYLTLRENCLYDIHFS------PG--AVGITELCRLFSLEHLIDYPC-----GLLSSGQK 133 (200)
T ss_pred cCHHHHHhheEEeccccccCcCCCHHHHHHHHHhcC------cc--hHHHHHHHHHcCCchhhhCCh-----hhcCHHHH
Confidence 2 234567999999988888999999998764211 11 235788999999987666654 36999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhh
Q 000808 836 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELF 901 (1275)
Q Consensus 836 qrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~ 901 (1275)
||++|||+|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|++. ....+|...
T Consensus 134 ~rv~laral~~~p~~lilDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~--~~~~~d~~~ 197 (200)
T PRK13540 134 RQVALLRLWMSKAKLWLLDEPLVALDELSLLTIITKIQEHRAKGGAVLLTSHQDL--PLNKADYEE 197 (200)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHcCCEEEEEeCCch--hccccchhh
Confidence 9999999999999999999999999999999999999998777999999999975 345566544
No 311
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=6.6e-35 Score=289.59 Aligned_cols=193 Identities=21% Similarity=0.343 Sum_probs=165.0
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCccc----cceEEEeccccccCCCCCHHHHHHHHHhccC
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFVP----QRTAAYISQHDVHIGEMTVRETLAFSARCQG 76 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~~~----~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~ 76 (1275)
+++++|||||||||.+.++.|+..|+ +|+|.++|.+++.... +..+||+||++..|..+||+|||.-..+.+.
T Consensus 32 iVGLLGPNGAGKTT~Fymi~Glv~~d---~G~i~ld~~diT~lPm~~RArlGigYLpQE~SIFr~LtV~dNi~~vlE~~~ 108 (243)
T COG1137 32 IVGLLGPNGAGKTTTFYMIVGLVRPD---SGKILLDDEDITKLPMHKRARLGIGYLPQEASIFRKLTVEDNIMAVLEIRE 108 (243)
T ss_pred EEEEECCCCCCceeEEEEEEEEEecC---CceEEECCcccccCChHHHhhcCcccccccchHhhcCcHHHHHHHHHhhhh
Confidence 47899999999999999999999998 9999999999987654 3468999999999999999999987665432
Q ss_pred CCCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhhHH
Q 000808 77 VGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTG 156 (1275)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA 156 (1275)
... ...+.+...+.+|+.|++.+..+. ....||||||||+.||
T Consensus 109 ~d~--------------------------------~~~~~~~~l~~LL~ef~i~hlr~~-----~a~sLSGGERRR~EIA 151 (243)
T COG1137 109 KDL--------------------------------KKAERKEELDALLEEFHITHLRDS-----KAYSLSGGERRRVEIA 151 (243)
T ss_pred cch--------------------------------hHHHHHHHHHHHHHHhchHHHhcC-----cccccccchHHHHHHH
Confidence 100 011223346789999999877764 4557999999999999
Q ss_pred HHHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhhHHH
Q 000808 157 EMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVLD 235 (1275)
Q Consensus 157 ~al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~~~~ 235 (1275)
|||+.+|++++||||++|+||.+..+|.+.++.+.. ++.-|+++.|+..|...+|||..++.+|++..+|+++++.+
T Consensus 152 RaLa~~P~fiLLDEPFAGVDPiaV~dIq~iI~~L~~--rgiGvLITDHNVREtL~i~dRaYIi~~G~vla~G~p~ei~~ 228 (243)
T COG1137 152 RALAANPKFILLDEPFAGVDPIAVIDIQRIIKHLKD--RGIGVLITDHNVRETLDICDRAYIISDGKVLAEGSPEEIVN 228 (243)
T ss_pred HHHhcCCCEEEecCCccCCCchhHHHHHHHHHHHHh--CCceEEEccccHHHHHhhhheEEEEecCeEEecCCHHHHhc
Confidence 999999999999999999999999999999998764 36667778999999999999999999999999999999864
No 312
>cd03229 ABC_Class3 This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.1e-34 Score=300.05 Aligned_cols=170 Identities=29% Similarity=0.422 Sum_probs=148.5
Q ss_pred EEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCCc
Q 000808 679 TFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 758 (1275)
Q Consensus 679 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 758 (1275)
+++|+++.++ ++++++|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~ 66 (178)
T cd03229 2 ELKNVSKRYG-------------QKTVLNDVSLNIEAGEIVALLGPSGSGKSTLLRCIAGLEE--PDSGSILIDGEDLTD 66 (178)
T ss_pred EEEEEEEEEC-------------CeEEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEccc
Confidence 5678877663 2459999999999999999999999999999999999865 348999999987542
Q ss_pred -----ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHH
Q 000808 759 -----ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTE 833 (1275)
Q Consensus 759 -----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgG 833 (1275)
...++.++|++|++.+++.+|++|++.+. ||||
T Consensus 67 ~~~~~~~~~~~i~~~~q~~~~~~~~t~~~~l~~~------------------------------------------lS~G 104 (178)
T cd03229 67 LEDELPPLRRRIGMVFQDFALFPHLTVLENIALG------------------------------------------LSGG 104 (178)
T ss_pred cchhHHHHhhcEEEEecCCccCCCCCHHHheeec------------------------------------------CCHH
Confidence 23456799999999888889999987531 8999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhhhhheeecC
Q 000808 834 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDELFLMKRG 906 (1275)
Q Consensus 834 erqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~g 906 (1275)
||||++||++|+.+|++++|||||+|||+.++..+.+.|++++++ |+|+|+++|++. ++.+.+|++++|++|
T Consensus 105 ~~qr~~la~al~~~p~llilDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~g 177 (178)
T cd03229 105 QQQRVALARALAMDPDVLLLDEPTSALDPITRREVRALLKSLQAQLGITVVLVTHDLD-EAARLADRVVVLRDG 177 (178)
T ss_pred HHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEeCC
Confidence 999999999999999999999999999999999999999998876 899999999975 466689999999863
No 313
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=3.4e-34 Score=317.63 Aligned_cols=210 Identities=29% Similarity=0.427 Sum_probs=161.0
Q ss_pred EEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCCc
Q 000808 679 TFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 758 (1275)
Q Consensus 679 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 758 (1275)
+++|+++.+.. .+++.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~i~~l~~~~~~----------~~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~ 69 (238)
T cd03249 2 EFKNVSFRYPS----------RPDVPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYD--PTSGEILLDGVDIRD 69 (238)
T ss_pred eEEEEEEecCC----------CCCccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCC--CCCCEEEECCEehhh
Confidence 56788776631 012469999999999999999999999999999999999865 347999999987532
Q ss_pred ---ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccc-------cccCCCCC
Q 000808 759 ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQS-------LVGLPGES 828 (1275)
Q Consensus 759 ---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~-------~~~~~~~~ 828 (1275)
...++.++|++|++.+++ .|++|++.+.... ...++ .++.++..++.+..+. ... ....
T Consensus 70 ~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~~-----~~~~~----~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~ 138 (238)
T cd03249 70 LNLRWLRSQIGLVSQEPVLFD-GTIAENIRYGKPD-----ATDEE----VEEAAKKANIHDFIMSLPDGYDTLVG-ERGS 138 (238)
T ss_pred cCHHHHHhhEEEECCchhhhh-hhHHHHhhccCCC-----CCHHH----HHHHHHHcChHHHHHhhccccceeec-cCCc
Confidence 223456999999988776 6999999764211 11111 2223333333221111 111 1235
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcE
Q 000808 829 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQ 908 (1275)
Q Consensus 829 ~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~ 908 (1275)
.||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++. +|+|||+++|+++ ++ +.+|++++|++ |+
T Consensus 139 ~LS~G~~qrv~la~al~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~-~g~~vi~~sh~~~-~~-~~~d~v~~l~~-G~ 214 (238)
T cd03249 139 QLSGGQKQRIAIARALLRNPKILLLDEATSALDAESEKLVQEALDRAM-KGRTTIVIAHRLS-TI-RNADLIAVLQN-GQ 214 (238)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhc-CCCEEEEEeCCHH-HH-hhCCEEEEEEC-CE
Confidence 799999999999999999999999999999999999999999999986 7899999999986 34 47999999986 78
Q ss_pred EEEECCC
Q 000808 909 EIYVGPL 915 (1275)
Q Consensus 909 ~~~~g~~ 915 (1275)
+++.|+.
T Consensus 215 i~~~~~~ 221 (238)
T cd03249 215 VVEQGTH 221 (238)
T ss_pred EEEeCCH
Confidence 9998875
No 314
>PRK14252 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3e-33 Score=314.55 Aligned_cols=217 Identities=22% Similarity=0.246 Sum_probs=174.7
Q ss_pred CcEEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCC--c-eEEEEEEE
Q 000808 675 PHSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--G-YITGNITI 751 (1275)
Q Consensus 675 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~--~-~~~G~i~~ 751 (1275)
+..++++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|..++ + +.+|+|.+
T Consensus 14 ~~~l~~~~l~~~~~-------------~~~vl~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~sG~i~~ 80 (265)
T PRK14252 14 QQKSEVNKLNFYYG-------------GYQALKNINMMVHEKQVTALIGPSGCGKSTFLRCFNRMHDLYPGNHYEGEIIL 80 (265)
T ss_pred CceEEEEEEEEEEC-------------CeeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCCCcccEEEE
Confidence 34689999998873 23599999999999999999999999999999999997542 1 25899999
Q ss_pred cCccCC---c----ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCc----cccc
Q 000808 752 SGYPKK---Q----ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNP----LRQS 820 (1275)
Q Consensus 752 ~g~~~~---~----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~----~~~~ 820 (1275)
+|.+.. . ...++.++|++|++.+++. |++||+.+...... . ......+++++++++.+++.+ ..+.
T Consensus 81 ~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~-tv~eni~~~~~~~~-~-~~~~~~~~~~~~~l~~~~l~~~l~~~~~~ 157 (265)
T PRK14252 81 HPDNVNILSPEVDPIEVRMRISMVFQKPNPFPK-SIFENVAYGLRIRG-V-KRRSILEERVENALRNAALWDEVKDRLGD 157 (265)
T ss_pred cCccccccccccCHHHHhccEEEEccCCcCCcc-hHHHHHHhHHHHcC-C-ChHHHHHHHHHHHHHHcCCchhhhHHHhC
Confidence 987642 1 1245678999999988885 99999987643221 1 111223456778888888742 2233
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhh
Q 000808 821 LVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEL 900 (1275)
Q Consensus 821 ~~~~~~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~ 900 (1275)
. ...||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++++ ++|||+++|+++ ++.+.+|++
T Consensus 158 ~-----~~~LS~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~-~~tiiivth~~~-~~~~~~d~i 230 (265)
T PRK14252 158 L-----AFNLSGGQQQRLCIARALATDPEILLFDEPTSALDPIATASIEELISDLKN-KVTILIVTHNMQ-QAARVSDYT 230 (265)
T ss_pred C-----cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHh-CCEEEEEecCHH-HHHHhCCEE
Confidence 3 347999999999999999999999999999999999999999999999865 689999999975 567889999
Q ss_pred heeecCcEEEEECCC
Q 000808 901 FLMKRGGQEIYVGPL 915 (1275)
Q Consensus 901 ~~l~~gg~~~~~g~~ 915 (1275)
++|++ |+++..|+.
T Consensus 231 ~~l~~-G~i~~~g~~ 244 (265)
T PRK14252 231 AYMYM-GELIEFGAT 244 (265)
T ss_pred EEEEC-CEEEEeCCH
Confidence 99985 799999876
No 315
>TIGR02324 CP_lyasePhnL phosphonate C-P lyase system protein PhnL. Members of this family are the PhnL protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated C-P lysase complex. This protein (PhnL) and the adjacent-encoded PhnK (TIGR02323) resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this C-P lyase complex rather than part of a transporter per se.
Probab=100.00 E-value=1.8e-33 Score=308.87 Aligned_cols=210 Identities=22% Similarity=0.272 Sum_probs=165.5
Q ss_pred EEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcC--c-
Q 000808 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISG--Y- 754 (1275)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g--~- 754 (1275)
++++|+++.++.... ...++.+|+|+|++|++||+++|+||||||||||+++|+|..++ ..|+|.++| .
T Consensus 2 l~~~~l~~~~~~~~~------~~~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~~~g~~ 73 (224)
T TIGR02324 2 LEVEDLSKTFTLHQQ------GGVRLPVLKNVSLTVNAGECVALSGPSGAGKSTLLKSLYANYLP--DSGRILVRHEGAW 73 (224)
T ss_pred EEEEeeEEEeecccC------CCcceEEEecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCCeEEEecCCCc
Confidence 567888887742100 00124699999999999999999999999999999999998653 479999984 2
Q ss_pred -cCCc---cc----ccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCcc-ccccccCC
Q 000808 755 -PKKQ---ET----FTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPL-RQSLVGLP 825 (1275)
Q Consensus 755 -~~~~---~~----~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~-~~~~~~~~ 825 (1275)
+... .. .++.++|++|++.+++.+|++|++.+..... ....+...+++.++++.+|+.+. .+..+
T Consensus 74 ~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~--- 147 (224)
T TIGR02324 74 VDLAQASPREVLEVRRKTIGYVSQFLRVIPRVSALEVVAEPLLER---GVPREAARARARELLARLNIPERLWHLPP--- 147 (224)
T ss_pred cchhhcCHHHHHHHHhcceEEEecccccCCCccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhhhCCc---
Confidence 3211 11 1346899999999999999999998764322 12233345567889999999753 34443
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheee
Q 000808 826 GESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMK 904 (1275)
Q Consensus 826 ~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~ 904 (1275)
..||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++.++|+|||+++|++. .+...+|+++.+.
T Consensus 148 --~~LS~G~~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vsH~~~-~~~~~~d~i~~~~ 223 (224)
T TIGR02324 148 --ATFSGGEQQRVNIARGFIADYPILLLDEPTASLDAANRQVVVELIAEAKARGAALIGIFHDEE-VRELVADRVMDVT 223 (224)
T ss_pred --ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcceeEecC
Confidence 579999999999999999999999999999999999999999999998777999999999954 3556889988763
No 316
>COG4161 ArtP ABC-type arginine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=6.1e-34 Score=271.28 Aligned_cols=214 Identities=23% Similarity=0.334 Sum_probs=178.6
Q ss_pred EEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCC
Q 000808 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1275)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 757 (1275)
+..+++++.|. ..++|.||+++.+.||.+.++||||||||||++.|.-... +.+|+..|.|..-+
T Consensus 3 irv~~in~~yg-------------~~q~lfdi~l~~~~getlvllgpsgagkssllr~lnlle~--p~sg~l~ia~~~fd 67 (242)
T COG4161 3 IQLNGINCFYG-------------AHQALFDITLDCPEGETLVLLGPSGAGKSSLLRVLNLLEM--PRSGTLNIAGNHFD 67 (242)
T ss_pred eEEcccccccc-------------cchheeeeeecCCCCCEEEEECCCCCchHHHHHHHHHHhC--CCCCeEEecccccc
Confidence 55667766653 4569999999999999999999999999999999986433 34677777665321
Q ss_pred -------c--ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCC
Q 000808 758 -------Q--ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGES 828 (1275)
Q Consensus 758 -------~--~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~ 828 (1275)
+ ..+|+.+|.|+|+-.++|.+||.|||.-+ .++. ...++++.+.+..++++.+.|.+.+|... -
T Consensus 68 ~s~~~~~k~i~~lr~~vgmvfqqy~lwphltv~enliea-p~kv-~gl~~~qa~~~a~ellkrlrl~~~adr~p-----l 140 (242)
T COG4161 68 FSKTPSDKAIRDLRRNVGMVFQQYNLWPHLTVQENLIEA-PCRV-LGLSKDQALARAEKLLKRLRLKPYADRYP-----L 140 (242)
T ss_pred cccCccHHHHHHHHHhhhhhhhhhccCchhHHHHHHHhh-hHHH-hCCCHHHHHHHHHHHHHHhccccccccCc-----e
Confidence 1 23567899999999999999999998543 2221 24566777788899999999999998874 4
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcE
Q 000808 829 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQ 908 (1275)
Q Consensus 829 ~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~ 908 (1275)
.|||||+|||+|||||+.+|++|+.||||++|||+-..++++++++++..|.|-++++|..+. .-+.+.+++.|.+ |+
T Consensus 141 hlsggqqqrvaiaralmmkpqvllfdeptaaldpeitaqvv~iikel~~tgitqvivthev~v-a~k~as~vvyme~-g~ 218 (242)
T COG4161 141 HLSGGQQQRVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIKELAETGITQVIVTHEVEV-ARKTASRVVYMEN-GH 218 (242)
T ss_pred ecccchhhhHHHHHHHhcCCcEEeecCcccccCHHHHHHHHHHHHHHHhcCceEEEEEeehhH-HHhhhhheEeeec-Ce
Confidence 699999999999999999999999999999999999999999999999999999999998652 3457789999986 79
Q ss_pred EEEECCC
Q 000808 909 EIYVGPL 915 (1275)
Q Consensus 909 ~~~~g~~ 915 (1275)
++..|+.
T Consensus 219 ive~g~a 225 (242)
T COG4161 219 IVEQGDA 225 (242)
T ss_pred eEeecch
Confidence 9999986
No 317
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=4.8e-34 Score=325.58 Aligned_cols=191 Identities=26% Similarity=0.358 Sum_probs=161.5
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCc--cccceEEEeccccccCCCCCHHHHHHHHHhccCCC
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEF--VPQRTAAYISQHDVHIGEMTVRETLAFSARCQGVG 78 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~--~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~ 78 (1275)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.+|||+|++.+++.+||+||+.|.+++.+..
T Consensus 35 i~gllGpNGaGKSTLl~~l~Gl~~p~---~G~v~i~G~~~~~~~~~~~~~ig~v~q~~~~~~~~tv~e~l~~~~~~~~~~ 111 (306)
T PRK13537 35 CFGLLGPNGAGKTTTLRMLLGLTHPD---AGSISLCGEPVPSRARHARQRVGVVPQFDNLDPDFTVRENLLVFGRYFGLS 111 (306)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEecccchHHHHhcEEEEeccCcCCCCCcHHHHHHHHHHHcCCC
Confidence 47999999999999999999999987 99999999987543 23567999999999999999999999866543210
Q ss_pred CcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhhHHHH
Q 000808 79 SRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEM 158 (1275)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~a 158 (1275)
. .+....++.+++.++|.+..++.+ ++|||||||||+||+|
T Consensus 112 ~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~la~a 152 (306)
T PRK13537 112 A----------------------------------AAARALVPPLLEFAKLENKADAKV-----GELSGGMKRRLTLARA 152 (306)
T ss_pred H----------------------------------HHHHHHHHHHHHHcCCchHhcCch-----hhCCHHHHHHHHHHHH
Confidence 0 001123466788999987776655 4799999999999999
Q ss_pred HhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhhHHH
Q 000808 159 MVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVLD 235 (1275)
Q Consensus 159 l~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~~~~ 235 (1275)
|+++|++++|||||+|||+.++.++++.++++.+ .+++|+.++|..+++.++||+|++|++|++++.|+++++.+
T Consensus 153 L~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~--~g~till~sH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~ 227 (306)
T PRK13537 153 LVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLA--RGKTILLTTHFMEEAERLCDRLCVIEEGRKIAEGAPHALIE 227 (306)
T ss_pred HhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh--CCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 9999999999999999999999999999998753 35667778999999999999999999999999999988764
No 318
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=4.9e-34 Score=281.59 Aligned_cols=184 Identities=23% Similarity=0.351 Sum_probs=159.6
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCcc------ccceEEEeccccccCCCCCHHHHHHHHHhc
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV------PQRTAAYISQHDVHIGEMTVRETLAFSARC 74 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~~------~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~ 74 (1275)
++-|+||||||||||||+|.+...|+ .|+|+++|.++.... .||+||+|+||.-+++..||.||+.|+.+.
T Consensus 30 f~fl~GpSGAGKSTllkLi~~~e~pt---~G~i~~~~~dl~~l~~~~iP~LRR~IGvVFQD~rLL~~~tvyeNVA~pL~v 106 (223)
T COG2884 30 FVFLTGPSGAGKSTLLKLIYGEERPT---RGKILVNGHDLSRLKGREIPFLRRQIGVVFQDFRLLPDRTVYENVALPLRV 106 (223)
T ss_pred EEEEECCCCCCHHHHHHHHHhhhcCC---CceEEECCeecccccccccchhhheeeeEeeeccccccchHhhhhhhhhhc
Confidence 46799999999999999999999998 999999999986543 368999999999999999999999998876
Q ss_pred cCCCCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhh
Q 000808 75 QGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVT 154 (1275)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvs 154 (1275)
.+.. ..+.+..+.+.|+..||.+..+. .+..|||||||||+
T Consensus 107 ~G~~----------------------------------~~~i~~rV~~~L~~VgL~~k~~~-----lP~~LSGGEQQRva 147 (223)
T COG2884 107 IGKP----------------------------------PREIRRRVSEVLDLVGLKHKARA-----LPSQLSGGEQQRVA 147 (223)
T ss_pred cCCC----------------------------------HHHHHHHHHHHHHHhccchhhhc-----CccccCchHHHHHH
Confidence 5521 11223356778999999887753 45689999999999
Q ss_pred HHHHHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEec
Q 000808 155 TGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQG 228 (1275)
Q Consensus 155 iA~al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G 228 (1275)
||||++.+|++|+-||||.+|||..+.+|++.+.++.+ .+|+|++.+|+..-+..+-.|++.|++|+++...
T Consensus 148 IARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr--~GtTVl~ATHd~~lv~~~~~rvl~l~~Grl~~d~ 219 (223)
T COG2884 148 IARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINR--LGTTVLMATHDLELVNRMRHRVLALEDGRLVRDE 219 (223)
T ss_pred HHHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhh--cCcEEEEEeccHHHHHhccCcEEEEeCCEEEecc
Confidence 99999999999999999999999999999999999865 3677887899998888899999999999998654
No 319
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=2.9e-34 Score=366.33 Aligned_cols=213 Identities=27% Similarity=0.427 Sum_probs=177.9
Q ss_pred cEEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCcc
Q 000808 676 HSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 755 (1275)
Q Consensus 676 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~ 755 (1275)
..++++|++++|+. +++++|+|+|++|+|||++||+|+||||||||+|+|+|..+ +.+|+|.+||.+
T Consensus 462 ~~I~~~~vsf~Y~~-----------~~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~--p~~G~I~idg~~ 528 (694)
T TIGR03375 462 GEIEFRNVSFAYPG-----------QETPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQ--PTEGSVLLDGVD 528 (694)
T ss_pred ceEEEEEEEEEeCC-----------CCccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEE
Confidence 46999999999841 23469999999999999999999999999999999999876 348999999998
Q ss_pred CCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCcc-------ccccccCC
Q 000808 756 KKQ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPL-------RQSLVGLP 825 (1275)
Q Consensus 756 ~~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~-------~~~~~~~~ 825 (1275)
.+. ..+++.++||+|++.+++ .|++||+.++. + +.+. +++.++++..++.+. .|+.+|..
T Consensus 529 l~~~~~~~lr~~i~~v~Q~~~lf~-~TI~eNi~~~~----~-~~~~----~~i~~a~~~~~l~~~i~~lp~gl~T~i~e~ 598 (694)
T TIGR03375 529 IRQIDPADLRRNIGYVPQDPRLFY-GTLRDNIALGA----P-YADD----EEILRAAELAGVTEFVRRHPDGLDMQIGER 598 (694)
T ss_pred hhhCCHHHHHhccEEECCChhhhh-hhHHHHHhCCC----C-CCCH----HHHHHHHHHcChHHHHHhCcccccceecCC
Confidence 653 456788999999998887 59999997641 1 2232 335666776666442 35666654
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeec
Q 000808 826 GESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKR 905 (1275)
Q Consensus 826 ~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~ 905 (1275)
..+||||||||++|||||+++|++++||||||+||++++..+++.|+++.+ ++|+|+++|+++ ..+.+|+|++|++
T Consensus 599 -G~~LSgGQrQRlalARall~~p~iliLDE~Ts~LD~~te~~i~~~l~~~~~-~~T~iiItHrl~--~~~~~D~iivl~~ 674 (694)
T TIGR03375 599 -GRSLSGGQRQAVALARALLRDPPILLLDEPTSAMDNRSEERFKDRLKRWLA-GKTLVLVTHRTS--LLDLVDRIIVMDN 674 (694)
T ss_pred -CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhC-CCEEEEEecCHH--HHHhCCEEEEEeC
Confidence 357999999999999999999999999999999999999999999998764 799999999985 5688999999986
Q ss_pred CcEEEEECCCC
Q 000808 906 GGQEIYVGPLG 916 (1275)
Q Consensus 906 gg~~~~~g~~~ 916 (1275)
|+++..|+.+
T Consensus 675 -G~i~e~G~~~ 684 (694)
T TIGR03375 675 -GRIVADGPKD 684 (694)
T ss_pred -CEEEeeCCHH
Confidence 7999999863
No 320
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.6e-34 Score=295.67 Aligned_cols=190 Identities=25% Similarity=0.284 Sum_probs=161.6
Q ss_pred EEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCcc----ccceEEEeccccc--cCCCCCHHHHHHHHHhcc
Q 000808 2 TLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV----PQRTAAYISQHDV--HIGEMTVRETLAFSARCQ 75 (1275)
Q Consensus 2 ~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~~----~~~~~~yv~Q~~~--~~~~lTv~e~l~f~~~~~ 75 (1275)
.+|+|+||||||||.++|+|..+|+ +|+|.++|.+..... ..+.+.+|+||+. +-|..||++.|.-+.+.+
T Consensus 36 lgivGeSGsGKSTL~r~l~Gl~~p~---~G~I~~~G~~~~~~~~~~~~~~~VQmVFQDp~~SLnP~~tv~~~l~Epl~~~ 112 (252)
T COG1124 36 LGIVGESGSGKSTLARLLAGLEKPS---SGSILLDGKPLAPKKRAKAFYRPVQMVFQDPYSSLNPRRTVGRILSEPLRPH 112 (252)
T ss_pred EEEEcCCCCCHHHHHHHHhcccCCC---CceEEECCcccCccccchhhccceeEEecCCccccCcchhHHHHHhhhhccC
Confidence 6899999999999999999999997 999999998775532 4578999999854 568889999998776543
Q ss_pred CCCCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhhH
Q 000808 76 GVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTT 155 (1275)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsi 155 (1275)
+.++ .+..+.++++.+||++.. -++++..|||||||||+|
T Consensus 113 ~~~~------------------------------------~~~~i~~~L~~VgL~~~~----l~R~P~eLSGGQ~QRiaI 152 (252)
T COG1124 113 GLSK------------------------------------SQQRIAELLDQVGLPPSF----LDRRPHELSGGQRQRIAI 152 (252)
T ss_pred CccH------------------------------------HHHHHHHHHHHcCCCHHH----HhcCchhcChhHHHHHHH
Confidence 3211 011256689999998654 357788999999999999
Q ss_pred HHHHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhhHHH
Q 000808 156 GEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVLD 235 (1275)
Q Consensus 156 A~al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~~~~ 235 (1275)
||||..+|++|+||||||+||+..+.+|++.|.++.+. .+.+.+.++|+..-+.++||||++|++|++++.++.+++.+
T Consensus 153 ARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~-~~lt~l~IsHdl~~v~~~cdRi~Vm~~G~ivE~~~~~~l~~ 231 (252)
T COG1124 153 ARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKE-RGLTYLFISHDLALVEHMCDRIAVMDNGQIVEIGPTEELLS 231 (252)
T ss_pred HHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHh-cCceEEEEeCcHHHHHHHhhheeeeeCCeEEEeechhhhhc
Confidence 99999999999999999999999999999999998664 46677779999999999999999999999999999998864
No 321
>COG4598 HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2.7e-34 Score=278.87 Aligned_cols=205 Identities=22% Similarity=0.329 Sum_probs=173.0
Q ss_pred cccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCCc----------------ccccce
Q 000808 701 DKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ----------------ETFTRI 764 (1275)
Q Consensus 701 ~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~----------------~~~~~~ 764 (1275)
+...+|++||++.++|+.+.|+|.|||||||+|+||.-... +..|.|.+||..+.. ...|..
T Consensus 17 G~~eVLKGvSL~A~~GdVisIIGsSGSGKSTfLRCiN~LE~--P~~G~I~v~geei~~k~~~~G~l~~ad~~q~~r~Rs~ 94 (256)
T COG4598 17 GEHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEK--PSAGSIRVNGEEIRLKRDKDGQLKPADKRQLQRLRTR 94 (256)
T ss_pred ccchhhcceeeecCCCCEEEEecCCCCchhHHHHHHHhhcC--CCCceEEECCeEEEeeeCCCCCeeeCCHHHHHHHHHH
Confidence 44579999999999999999999999999999999987655 458999999975421 112345
Q ss_pred EEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHH
Q 000808 765 SGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKRLTIAVEL 844 (1275)
Q Consensus 765 ~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~~l 844 (1275)
.|+|+|...++.++||.||+.-+- ... ...++.+..++.+..|+.+|+.+.++.+. ..|||||+||++|||||
T Consensus 95 L~mVFQ~FNLWsHmtvLeNViEaP-vhV-Lg~~k~ea~e~Ae~~L~kVGi~ek~~~YP-----~~LSGGQQQR~aIARaL 167 (256)
T COG4598 95 LGMVFQHFNLWSHMTVLENVIEAP-VHV-LGVSKAEAIERAEKYLAKVGIAEKADAYP-----AHLSGGQQQRVAIARAL 167 (256)
T ss_pred hhHhhhhcchhHHHHHHHHHHhcc-hHh-hcCCHHHHHHHHHHHHHHhCchhhhhcCc-----cccCchHHHHHHHHHHH
Confidence 799999999999999999986432 111 13456667778899999999999888764 46999999999999999
Q ss_pred hhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcEEEEECCCC
Q 000808 845 VANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVGPLG 916 (1275)
Q Consensus 845 ~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~~ 916 (1275)
+.+|++++.|||||+|||+-.-++.+.+++++++|+|++++||.... .-+...+++.|.+ |.+-..||+.
T Consensus 168 ameP~vmLFDEPTSALDPElVgEVLkv~~~LAeEgrTMv~VTHEM~F-AR~Vss~v~fLh~-G~iEE~G~P~ 237 (256)
T COG4598 168 AMEPEVMLFDEPTSALDPELVGEVLKVMQDLAEEGRTMVVVTHEMGF-ARDVSSHVIFLHQ-GKIEEEGPPE 237 (256)
T ss_pred hcCCceEeecCCcccCCHHHHHHHHHHHHHHHHhCCeEEEEeeehhH-HHhhhhheEEeec-ceecccCChH
Confidence 99999999999999999999999999999999999999999998652 3456789999986 7999999983
No 322
>TIGR01189 ccmA heme ABC exporter, ATP-binding protein CcmA. This model describes the cyt c biogenesis protein encoded by ccmA in bacteria. An exception is, an arabidopsis protein. Quite likely this is encoded by an organelle. Bacterial c-type cytocromes are located on the periplasmic side of the cytoplasmic membrane. Several gene products encoded in a locus designated as 'ccm' are implicated in the transport and assembly of the functional cytochrome C. This cluster includes genes: ccmA;B;C;D;E;F;G and H. The posttranslational pathway includes the transport of heme moiety, the secretion of the apoprotein and the covalent attachment of the heme with the apoprotein. The proteins ccmA and B represent an ABC transporter; ccmC and D participate in heme transfer to ccmE, which function as a periplasmic heme chaperone. The presence of ccmF, G and H is suggested to be obligatory for the final functional assembly of cytochrome c.
Probab=100.00 E-value=1.8e-33 Score=302.35 Aligned_cols=185 Identities=25% Similarity=0.326 Sum_probs=156.6
Q ss_pred EEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCCc
Q 000808 679 TFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 758 (1275)
Q Consensus 679 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 758 (1275)
+++|+++.+. ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~ 66 (198)
T TIGR01189 2 AARNLACSRG-------------ERMLFEGLSFTLNAGEALQVTGPNGIGKTTLLRILAGLLR--PDSGEVRWNGTALAE 66 (198)
T ss_pred EEEEEEEEEC-------------CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCccEEEECCEEccc
Confidence 5677877653 2469999999999999999999999999999999999865 347999999987532
Q ss_pred --ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHH
Q 000808 759 --ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRK 836 (1275)
Q Consensus 759 --~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerq 836 (1275)
..+++.++|++|++.+++.+|+.||+.+....+. . + ++.++++++.+++.+..++.+ ..|||||||
T Consensus 67 ~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~----~-~--~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 134 (198)
T TIGR01189 67 QRDEPHRNILYLGHLPGLKPELSALENLHFWAAIHG----G-A--QRTIEDALAAVGLTGFEDLPA-----AQLSAGQQR 134 (198)
T ss_pred chHHhhhheEEeccCcccccCCcHHHHHHHHHHHcC----C-c--HHHHHHHHHHcCCHHHhcCCh-----hhcCHHHHH
Confidence 2234678999999888888999999987653321 1 1 235778999999988777665 469999999
Q ss_pred HHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCC
Q 000808 837 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPS 890 (1275)
Q Consensus 837 rv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~ 890 (1275)
|++|||+|+.+|++++|||||+|||+.++..+.+.|++++++|.|||+++|++.
T Consensus 135 rv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~ 188 (198)
T TIGR01189 135 RLALARLWLSRAPLWILDEPTTALDKAGVALLAGLLRAHLARGGIVLLTTHQDL 188 (198)
T ss_pred HHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEEcccc
Confidence 999999999999999999999999999999999999998777899999999975
No 323
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.5e-33 Score=326.03 Aligned_cols=229 Identities=26% Similarity=0.385 Sum_probs=193.5
Q ss_pred cEEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCcc
Q 000808 676 HSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 755 (1275)
Q Consensus 676 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~ 755 (1275)
.-++++|+++++. ..++|+||||++++||++||+|.||||||||+|+|+|... +.+|+|.+||.+
T Consensus 7 ~ll~~~~i~K~Fg-------------gV~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~--p~~G~I~~~G~~ 71 (500)
T COG1129 7 PLLELRGISKSFG-------------GVKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYP--PDSGEILIDGKP 71 (500)
T ss_pred ceeeeecceEEcC-------------CceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCccc--CCCceEEECCEE
Confidence 3588999988774 3569999999999999999999999999999999999766 458999999997
Q ss_pred CCc----ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCC-CCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCC
Q 000808 756 KKQ----ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLP-PEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGL 830 (1275)
Q Consensus 756 ~~~----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~-~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~l 830 (1275)
... .....-++.|.|+..+.|++||.||+.++...+.+ .-.+.....++..++++.+++....++.++ .|
T Consensus 72 ~~~~sp~~A~~~GI~~V~QEl~L~p~LsVaeNifLgre~~~~~g~id~~~m~~~A~~~l~~lg~~~~~~~~v~-----~L 146 (500)
T COG1129 72 VAFSSPRDALAAGIATVHQELSLVPNLSVAENIFLGREPTRRFGLIDRKAMRRRARELLARLGLDIDPDTLVG-----DL 146 (500)
T ss_pred ccCCCHHHHHhCCcEEEeechhccCCccHHHHhhcccccccCCCccCHHHHHHHHHHHHHHcCCCCChhhhhh-----hC
Confidence 642 22345689999999999999999999776544331 234566777788999999999644777775 69
Q ss_pred CHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcEEE
Q 000808 831 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQEI 910 (1275)
Q Consensus 831 SgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~ 910 (1275)
|.||||.|.|||||..+++||+||||||.|+......+.+.++++.++|.+||++||.++ ++++.+|++.+|.+ |+.+
T Consensus 147 siaqrQ~VeIArAl~~~arllIlDEPTaaLt~~E~~~Lf~~ir~Lk~~Gv~ii~ISHrl~-Ei~~i~DritVlRD-G~~v 224 (500)
T COG1129 147 SIAQRQMVEIARALSFDARVLILDEPTAALTVKETERLFDLIRRLKAQGVAIIYISHRLD-EVFEIADRITVLRD-GRVV 224 (500)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEcCcHH-HHHHhcCEEEEEeC-CEEe
Confidence 999999999999999999999999999999999999999999999999999999999996 89999999999997 7889
Q ss_pred EECCC-Cccc-hHHHHHH
Q 000808 911 YVGPL-GRHS-CHLIRYF 926 (1275)
Q Consensus 911 ~~g~~-~~~~-~~~~~~f 926 (1275)
-.++. ++.. ++++...
T Consensus 225 ~~~~~~~~~~~~~lv~~M 242 (500)
T COG1129 225 GTRPTAAETSEDELVRLM 242 (500)
T ss_pred eecccccCCCHHHHHHHh
Confidence 88883 4332 3444443
No 324
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.8e-34 Score=314.01 Aligned_cols=211 Identities=25% Similarity=0.389 Sum_probs=164.8
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 756 (1275)
.++++|+++++. +.+.+++|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++
T Consensus 2 ~l~~~~l~~~~~------------~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~ 67 (229)
T cd03254 2 EIEFENVNFSYD------------EKKPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYD--PQKGQILIDGIDI 67 (229)
T ss_pred eEEEEEEEEecC------------CCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcC--CCCCEEEECCEeH
Confidence 478899988763 12359999999999999999999999999999999999865 3479999999865
Q ss_pred Cc---ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccc-c-----CCCC
Q 000808 757 KQ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLV-G-----LPGE 827 (1275)
Q Consensus 757 ~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~-~-----~~~~ 827 (1275)
.. ..+++.++|++|++.+++. |++||+.+... .... ..+++.++.+++.+..+... | ....
T Consensus 68 ~~~~~~~~~~~i~~~~q~~~~~~~-tv~~~~~~~~~-----~~~~----~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 137 (229)
T cd03254 68 RDISRKSLRSMIGVVLQDTFLFSG-TIMENIRLGRP-----NATD----EEVIEAAKEAGAHDFIMKLPNGYDTVLGENG 137 (229)
T ss_pred HHcCHHHHhhhEEEecCCchhhhh-HHHHHHhccCC-----CCCH----HHHHHHHHHhChHHHHHhCcccccCHhhcCC
Confidence 32 2345668999999887775 99999976421 1111 12344444444433322211 0 1123
Q ss_pred CCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCc
Q 000808 828 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGG 907 (1275)
Q Consensus 828 ~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg 907 (1275)
..||||||||++||++|+.+|++++|||||+|||+.++..+++.|+++. +|+|||++||+++ ++ ..+|++++|++ |
T Consensus 138 ~~LS~G~~~rv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~-~~~tii~~sh~~~-~~-~~~d~i~~l~~-g 213 (229)
T cd03254 138 GNLSQGERQLLAIARAMLRDPKILILDEATSNIDTETEKLIQEALEKLM-KGRTSIIIAHRLS-TI-KNADKILVLDD-G 213 (229)
T ss_pred CcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhc-CCCEEEEEecCHH-HH-hhCCEEEEEeC-C
Confidence 5799999999999999999999999999999999999999999999985 4899999999985 34 56999999986 7
Q ss_pred EEEEECCC
Q 000808 908 QEIYVGPL 915 (1275)
Q Consensus 908 ~~~~~g~~ 915 (1275)
++++.|+.
T Consensus 214 ~~~~~~~~ 221 (229)
T cd03254 214 KIIEEGTH 221 (229)
T ss_pred eEEEeCCH
Confidence 88888764
No 325
>COG0396 sufC Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=5.2e-33 Score=283.95 Aligned_cols=229 Identities=25% Similarity=0.299 Sum_probs=192.7
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 756 (1275)
.++.+|+++++. +++.||++||++|++||+.+||||||||||||.++|+|.+....++|+|.++|.++
T Consensus 3 ~L~I~dLhv~v~------------~~keILkgvnL~v~~GEvhaiMGPNGsGKSTLa~~i~G~p~Y~Vt~G~I~~~GedI 70 (251)
T COG0396 3 MLEIKDLHVEVE------------GKKEILKGVNLTVKEGEVHAIMGPNGSGKSTLAYTIMGHPKYEVTEGEILFDGEDI 70 (251)
T ss_pred eeEEeeeEEEec------------CchhhhcCcceeEcCCcEEEEECCCCCCHHHHHHHHhCCCCceEecceEEECCccc
Confidence 478899998874 22579999999999999999999999999999999999987777899999999987
Q ss_pred Cc----ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCc-cccccccCCCCCCCC
Q 000808 757 KQ----ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNP-LRQSLVGLPGESGLS 831 (1275)
Q Consensus 757 ~~----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~-~~~~~~~~~~~~~lS 831 (1275)
.. ++.+.-+...+|.|.-+|..|+.+.|..+...+........+..+.+++.++.+++.+ ..++.+. .|+|
T Consensus 71 ~~l~~~ERAr~GifLafQ~P~ei~GV~~~~fLr~a~n~~~~~~~~~~~~~~~~~e~~~~l~~~~~~l~R~vN----~GFS 146 (251)
T COG0396 71 LELSPDERARAGIFLAFQYPVEIPGVTNSDFLRAAMNARRGARGILPEFIKELKEKAELLGLDEEFLERYVN----EGFS 146 (251)
T ss_pred ccCCHhHHHhcCCEEeecCCccCCCeeHHHHHHHHHHhhhccccccHHHHHHHHHHHHHcCCCHHHhhcccC----CCcC
Confidence 53 2345557788999999999999999987765443221112344567888999999987 5566664 4799
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhh--hhhheeecCcEE
Q 000808 832 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESF--DELFLMKRGGQE 909 (1275)
Q Consensus 832 gGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~--d~~~~l~~gg~~ 909 (1275)
||||||..|+.+++.+|++.+||||-||||..+-+.+-+.++++.+.|++++++||.. .+.++. |++.+|.+ |++
T Consensus 147 GGEkKR~EilQ~~~lePkl~ILDE~DSGLDIdalk~V~~~i~~lr~~~~~~liITHy~--rll~~i~pD~vhvl~~-GrI 223 (251)
T COG0396 147 GGEKKRNEILQLLLLEPKLAILDEPDSGLDIDALKIVAEGINALREEGRGVLIITHYQ--RLLDYIKPDKVHVLYD-GRI 223 (251)
T ss_pred cchHHHHHHHHHHhcCCCEEEecCCCcCccHHHHHHHHHHHHHHhcCCCeEEEEecHH--HHHhhcCCCEEEEEEC-CEE
Confidence 9999999999999999999999999999999999999999999998999999999985 577776 99999996 799
Q ss_pred EEECCCCccchHHHHHHhcC
Q 000808 910 IYVGPLGRHSCHLIRYFEGI 929 (1275)
Q Consensus 910 ~~~g~~~~~~~~~~~~f~~~ 929 (1275)
+..|.+ ++..+.+.-
T Consensus 224 v~sG~~-----el~~~le~~ 238 (251)
T COG0396 224 VKSGDP-----ELAEELEEK 238 (251)
T ss_pred EecCCH-----HHHHHHHHh
Confidence 999987 456666654
No 326
>TIGR00630 uvra excinuclease ABC, A subunit. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=100.00 E-value=2.5e-32 Score=344.26 Aligned_cols=123 Identities=23% Similarity=0.283 Sum_probs=99.0
Q ss_pred CCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCcc-ccccccCCCCCCCCHHHHHHHHHHHHHhh---CCcEEEE
Q 000808 778 VTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPL-RQSLVGLPGESGLSTEQRKRLTIAVELVA---NPSIIFM 853 (1275)
Q Consensus 778 ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~-~~~~~~~~~~~~lSgGerqrv~ia~~l~~---~p~illl 853 (1275)
+||.|.+.|...+. . ..+..++++.+||... .+..+ +.||||||||+.||++|+. +|++++|
T Consensus 790 ~tv~e~~~f~~~~~---~------i~~~l~~L~~~gL~~l~l~~~~-----~tLSgGe~QRl~LA~aL~~~~~~p~llIL 855 (924)
T TIGR00630 790 MTVEEAYEFFEAVP---S------ISRKLQTLCDVGLGYIKLGQPA-----TTLSGGEAQRIKLAKELSKRSTGRTLYIL 855 (924)
T ss_pred CcHHHHHHHHHhcc---c------hhHHHHHHHHcCCCchhhcCcc-----ccCCHHHHHHHHHHHHHhhcCCCCCEEEE
Confidence 56677766654331 0 1124578888999653 34443 4799999999999999997 5999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheee-----cCcEEEEECCCC
Q 000808 854 DEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMK-----RGGQEIYVGPLG 916 (1275)
Q Consensus 854 DEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~-----~gg~~~~~g~~~ 916 (1275)
||||+|||+.+...+++.|+++.++|.|||+++|+++ ....+|+++.|. +||++++.|+++
T Consensus 856 DEPtsgLD~~~~~~L~~~L~~l~~~G~TVIvi~H~~~--~i~~aD~ii~Lgp~~G~~gG~iv~~G~~~ 921 (924)
T TIGR00630 856 DEPTTGLHFDDIKKLLEVLQRLVDQGNTVVVIEHNLD--VIKTADYIIDLGPEGGDGGGTIVASGTPE 921 (924)
T ss_pred ECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH--HHHhCCEEEEecCCccCCCCEEEEeCCHH
Confidence 9999999999999999999999878999999999975 446799999994 578999999863
No 327
>PRK13545 tagH teichoic acids export protein ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-33 Score=327.38 Aligned_cols=209 Identities=20% Similarity=0.274 Sum_probs=171.0
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 756 (1275)
.++++|+++.+... ..+.+|+|+||++++||++||+|||||||||||++|+|..+ +.+|+|.++|.+.
T Consensus 21 mL~lknL~~~~~~~----------~~~~IL~nVSfsI~~GEivgIiGpNGSGKSTLLkiLaGLl~--P~sGeI~I~G~~~ 88 (549)
T PRK13545 21 FDKLKDLFFRSKDG----------EYHYALNNISFEVPEGEIVGIIGLNGSGKSTLSNLIAGVTM--PNKGTVDIKGSAA 88 (549)
T ss_pred eeEEEEEEEecCCC----------ccceEEeeeEEEEeCCCEEEEEcCCCCCHHHHHHHHhCCCC--CCceEEEECCEee
Confidence 47788887765311 12469999999999999999999999999999999999865 3489999999641
Q ss_pred CcccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHH
Q 000808 757 KQETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRK 836 (1275)
Q Consensus 757 ~~~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerq 836 (1275)
++.+...+.+.+|++|++.+..... ..+.++..++++++++.+++.+..+..+ +.|||||||
T Consensus 89 ----------~i~~~~~l~~~lTV~EnL~l~~~~~---~~~~~e~~e~i~elLe~lgL~~~ld~~~-----~~LSGGQrQ 150 (549)
T PRK13545 89 ----------LIAISSGLNGQLTGIENIELKGLMM---GLTKEKIKEIIPEIIEFADIGKFIYQPV-----KTYSSGMKS 150 (549)
T ss_pred ----------eEEeccccCCCCcHHHHHHhhhhhc---CCCHHHHHHHHHHHHHHcCChhHhhCCc-----ccCCHHHHH
Confidence 1222334567789999998754332 1233444556788999999988777765 479999999
Q ss_pred HHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcEEEEECCCC
Q 000808 837 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVGPLG 916 (1275)
Q Consensus 837 rv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~~ 916 (1275)
|++|||||+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|+++ .+...+|++++|.+ |+++..|+++
T Consensus 151 RVaLArAL~~~P~LLLLDEPTsgLD~~sr~~LlelL~el~~~G~TIIIVSHdl~-~i~~l~DrIivL~~-GkIv~~G~~~ 228 (549)
T PRK13545 151 RLGFAISVHINPDILVIDEALSVGDQTFTKKCLDKMNEFKEQGKTIFFISHSLS-QVKSFCTKALWLHY-GQVKEYGDIK 228 (549)
T ss_pred HHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHhCCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEECCHH
Confidence 999999999999999999999999999999999999998777999999999985 56778999999985 7999999874
Q ss_pred c
Q 000808 917 R 917 (1275)
Q Consensus 917 ~ 917 (1275)
+
T Consensus 229 e 229 (549)
T PRK13545 229 E 229 (549)
T ss_pred H
Confidence 3
No 328
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=4.3e-34 Score=365.60 Aligned_cols=211 Identities=24% Similarity=0.364 Sum_probs=175.9
Q ss_pred cEEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCcc
Q 000808 676 HSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 755 (1275)
Q Consensus 676 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~ 755 (1275)
..++++|++|+|+ +++++|+|+|++|+|||.+||+||||||||||+++|+|..+ +.+|+|.+||.+
T Consensus 472 ~~I~~~~vsf~y~------------~~~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~--p~~G~I~idg~~ 537 (708)
T TIGR01193 472 GDIVINDVSYSYG------------YGSNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQ--ARSGEILLNGFS 537 (708)
T ss_pred CcEEEEEEEEEcC------------CCCcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCC--CCCcEEEECCEE
Confidence 4699999999984 12469999999999999999999999999999999999876 358999999988
Q ss_pred CCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCcc-------ccccccCC
Q 000808 756 KKQ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPL-------RQSLVGLP 825 (1275)
Q Consensus 756 ~~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~-------~~~~~~~~ 825 (1275)
+.. ..+++.+|||+|++.+++. |++||+.++.. .+.+. +.+.++++..++.+. .|+.+|..
T Consensus 538 i~~~~~~~lr~~i~~v~Q~~~lf~g-TI~eNi~l~~~----~~~~~----~~i~~a~~~a~l~~~i~~lp~gldt~i~e~ 608 (708)
T TIGR01193 538 LKDIDRHTLRQFINYLPQEPYIFSG-SILENLLLGAK----ENVSQ----DEIWAACEIAEIKDDIENMPLGYQTELSEE 608 (708)
T ss_pred HHHcCHHHHHHheEEEecCceehhH-HHHHHHhccCC----CCCCH----HHHHHHHHHhCCHHHHHhcccccCcEecCC
Confidence 643 4567889999999998864 99999986421 12222 335666666666432 36666653
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeec
Q 000808 826 GESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKR 905 (1275)
Q Consensus 826 ~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~ 905 (1275)
..+||||||||++|||||+++|+||+||||||+||++++..+++.|+++ +|+|+|+++|+++ ..+.+|++++|++
T Consensus 609 -G~~LSgGQrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~--~~~T~IiitHr~~--~~~~~D~i~~l~~ 683 (708)
T TIGR01193 609 -GSSISGGQKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNL--QDKTIIFVAHRLS--VAKQSDKIIVLDH 683 (708)
T ss_pred -CCCCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh--cCCEEEEEecchH--HHHcCCEEEEEEC
Confidence 3579999999999999999999999999999999999999999999875 4799999999985 5688999999986
Q ss_pred CcEEEEECCC
Q 000808 906 GGQEIYVGPL 915 (1275)
Q Consensus 906 gg~~~~~g~~ 915 (1275)
|+++..|+.
T Consensus 684 -G~i~~~G~~ 692 (708)
T TIGR01193 684 -GKIIEQGSH 692 (708)
T ss_pred -CEEEEECCH
Confidence 799999986
No 329
>PRK14264 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.2e-33 Score=318.35 Aligned_cols=221 Identities=24% Similarity=0.293 Sum_probs=173.8
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCC---ceEEEEEEEcC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGNITISG 753 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~---~~~~G~i~~~g 753 (1275)
.+.++|+++.+. .+.+|+++|++|++||+++|+||||||||||+++|+|...+ .+.+|+|.++|
T Consensus 45 ~l~i~nl~~~~~-------------~~~iL~~is~~i~~Ge~~~IvG~nGsGKSTLl~~L~Gl~~~~~~~p~~G~I~i~g 111 (305)
T PRK14264 45 KLSVEDLDVYYG-------------DDHALKGVSMDIPEKSVTALIGPSGCGKSTFLRCLNRMNDRIKAARIDGSVELDG 111 (305)
T ss_pred eEEEEEEEEEeC-------------CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECC
Confidence 588999998873 23599999999999999999999999999999999997531 13589999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCC---------CCC-HHHHHHHHHHHHHHcCCCccc
Q 000808 754 YPKKQ-----ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPP---------EVD-SETQKMFIEEIMELVELNPLR 818 (1275)
Q Consensus 754 ~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~---------~~~-~~~~~~~~~~~l~~l~l~~~~ 818 (1275)
.++.. ...++.++|++|++.+++ .||+||+.+....+... ... .+..++.++++++.+++.+..
T Consensus 112 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~ 190 (305)
T PRK14264 112 QDIYQDGVNLVELRKRVGMVFQSPNPFP-KSIRENISYGPRKHGDINTGLLARLLGRDDKDAEDELVERSLRQAALWDEV 190 (305)
T ss_pred EEcccccccHHHHhhceEEEccCCcccc-ccHHHHHHhHHhhcccccccccccccccCchHHHHHHHHHHHHHcCCchhh
Confidence 87542 123467899999988877 59999998764321100 011 122345678899999884322
Q ss_pred cccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhh
Q 000808 819 QSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFD 898 (1275)
Q Consensus 819 ~~~~~~~~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d 898 (1275)
.... +...+.||||||||++||+||+.+|+||||||||+|||+.++..+.+.|+++++ ++|||+++|+++ .+.+.+|
T Consensus 191 ~~~~-~~~~~~LSgGq~qrv~LAraL~~~p~lLLLDEPtsgLD~~~~~~l~~~L~~~~~-~~tiiivtH~~~-~i~~~~d 267 (305)
T PRK14264 191 NDRL-DDNALGLSGGQQQRLCIARCLAVDPEVILMDEPASALDPIATSKIEDLIEELAE-EYTVVVVTHNMQ-QAARISD 267 (305)
T ss_pred hHHh-cCccccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEEcCHH-HHHHhcC
Confidence 1111 112357999999999999999999999999999999999999999999999876 589999999986 4677899
Q ss_pred hhh-eeecCcEEEEECCC
Q 000808 899 ELF-LMKRGGQEIYVGPL 915 (1275)
Q Consensus 899 ~~~-~l~~gg~~~~~g~~ 915 (1275)
+++ +|.+ |+++..|++
T Consensus 268 ~i~~~l~~-G~i~~~g~~ 284 (305)
T PRK14264 268 QTAVFLTG-GELVEYDDT 284 (305)
T ss_pred EEEEEecC-CEEEEeCCH
Confidence 975 5664 899999986
No 330
>PRK09544 znuC high-affinity zinc transporter ATPase; Reviewed
Probab=100.00 E-value=2e-33 Score=311.76 Aligned_cols=199 Identities=24% Similarity=0.328 Sum_probs=166.7
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 756 (1275)
-++++|+++.+. ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.
T Consensus 4 ~l~~~~l~~~~~-------------~~~vl~~vs~~i~~Ge~~~I~G~NGsGKSTLl~~i~Gl~~--p~~G~i~~~~~-- 66 (251)
T PRK09544 4 LVSLENVSVSFG-------------QRRVLSDVSLELKPGKILTLLGPNGAGKSTLVRVVLGLVA--PDEGVIKRNGK-- 66 (251)
T ss_pred EEEEeceEEEEC-------------CceEEEeEEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCc--
Confidence 478899988773 2359999999999999999999999999999999999865 34799999872
Q ss_pred CcccccceEEEeccCCCCCCCC--CHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHH
Q 000808 757 KQETFTRISGYCEQNDIHSPFV--TVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQ 834 (1275)
Q Consensus 757 ~~~~~~~~~~~v~q~~~~~~~l--tv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGe 834 (1275)
..++|++|++.+++.+ |+.+++.+. .... ++++.++++.+|+.+..+..+ ..|||||
T Consensus 67 ------~~i~~v~q~~~~~~~l~~~~~~~~~~~------~~~~----~~~~~~~l~~~gl~~~~~~~~-----~~LSgGq 125 (251)
T PRK09544 67 ------LRIGYVPQKLYLDTTLPLTVNRFLRLR------PGTK----KEDILPALKRVQAGHLIDAPM-----QKLSGGE 125 (251)
T ss_pred ------cCEEEeccccccccccChhHHHHHhcc------cccc----HHHHHHHHHHcCChHHHhCCh-----hhCCHHH
Confidence 3589999998777654 777776431 1111 234678999999988777665 4699999
Q ss_pred HHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhhhhheeecCcEEEEEC
Q 000808 835 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVG 913 (1275)
Q Consensus 835 rqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g 913 (1275)
|||++||++|+.+|++++|||||+|||+.++..+.+.|+++.++ |+|||+++|+++ ++.+.+|++++|. + +++..|
T Consensus 126 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tiiivsH~~~-~i~~~~d~i~~l~-~-~i~~~g 202 (251)
T PRK09544 126 TQRVLLARALLNRPQLLVLDEPTQGVDVNGQVALYDLIDQLRRELDCAVLMVSHDLH-LVMAKTDEVLCLN-H-HICCSG 202 (251)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEC-C-ceEeeC
Confidence 99999999999999999999999999999999999999998765 899999999986 5678899999995 4 588888
Q ss_pred CCC
Q 000808 914 PLG 916 (1275)
Q Consensus 914 ~~~ 916 (1275)
+++
T Consensus 203 ~~~ 205 (251)
T PRK09544 203 TPE 205 (251)
T ss_pred CHH
Confidence 763
No 331
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=7.2e-34 Score=329.99 Aligned_cols=191 Identities=27% Similarity=0.359 Sum_probs=161.5
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCcc-ccceEEEeccccccCCCCCHHHHHHHHHhccCCCC
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV-PQRTAAYISQHDVHIGEMTVRETLAFSARCQGVGS 79 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~~-~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~ 79 (1275)
+++|+|||||||||||++|+|..+|+ +|+|.++|+++.... .++.++||+|++.+||.+||.||+.|+.+.++..
T Consensus 42 ~~~LlGpsGsGKSTLLr~IaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~vfQ~~~lfp~ltv~eNi~~~l~~~~~~- 117 (375)
T PRK09452 42 FLTLLGPSGCGKTTVLRLIAGFETPD---SGRIMLDGQDITHVPAENRHVNTVFQSYALFPHMTVFENVAFGLRMQKTP- 117 (375)
T ss_pred EEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHCCEEEEecCcccCCCCCHHHHHHHHHhhcCCC-
Confidence 47999999999999999999999987 999999999886533 2467999999999999999999999976432110
Q ss_pred cchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhhHHHHH
Q 000808 80 RYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEMM 159 (1275)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~al 159 (1275)
..+....++++++.+||++..+ +.+.+|||||||||+|||||
T Consensus 118 ---------------------------------~~~~~~~~~~~l~~~~l~~~~~-----~~p~~LSgGq~QRVaLARaL 159 (375)
T PRK09452 118 ---------------------------------AAEITPRVMEALRMVQLEEFAQ-----RKPHQLSGGQQQRVAIARAV 159 (375)
T ss_pred ---------------------------------HHHHHHHHHHHHHHcCCchhhh-----CChhhCCHHHHHHHHHHHHH
Confidence 0011223567888999976554 45668999999999999999
Q ss_pred hcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhhHH
Q 000808 160 VGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVL 234 (1275)
Q Consensus 160 ~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~~~ 234 (1275)
+.+|++|||||||++||+.++.++.+.|+++.+.. +++++.++|+..++..++|+|++|++|+++..|+++++.
T Consensus 160 ~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~-g~tiI~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~i~ 233 (375)
T PRK09452 160 VNKPKVLLLDESLSALDYKLRKQMQNELKALQRKL-GITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPREIY 233 (375)
T ss_pred hcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 99999999999999999999999999999876543 455666899999999999999999999999999998874
No 332
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=2.1e-33 Score=346.51 Aligned_cols=216 Identities=23% Similarity=0.272 Sum_probs=175.7
Q ss_pred EEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcC----
Q 000808 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISG---- 753 (1275)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g---- 753 (1275)
++++|+++++. ++.+|+|+|+++++||+++|+|||||||||||++|+|..+..+.+|+|.++|
T Consensus 1 l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~iiG~nGsGKSTLl~~l~Gl~~~~p~~G~i~~~~~~~~ 67 (520)
T TIGR03269 1 IEVKNLTKKFD-------------GKEVLKNISFTIEEGEVLGILGRSGAGKSVLMHVLRGMDQYEPTSGRIIYHVALCE 67 (520)
T ss_pred CEEEEEEEEEC-------------CeEeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhhcccCCCCceEEEEeccccc
Confidence 35788887763 2469999999999999999999999999999999999741013479999872
Q ss_pred -------------------ccCC----------c---ccccceEEEeccC-CCCCCCCCHHHHHHHHHhccCCCCCCHHH
Q 000808 754 -------------------YPKK----------Q---ETFTRISGYCEQN-DIHSPFVTVYESLLYSAWLRLPPEVDSET 800 (1275)
Q Consensus 754 -------------------~~~~----------~---~~~~~~~~~v~q~-~~~~~~ltv~e~l~~~~~l~~~~~~~~~~ 800 (1275)
.++. . ...++.++|++|+ +.+++.+||+|++.+..... ....++
T Consensus 68 ~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~---~~~~~~ 144 (520)
T TIGR03269 68 KCGYVERPSKVGEPCPVCGGTLEPEEVDFWNLSDKLRRRIRKRIAIMLQRTFALYGDDTVLDNVLEALEEI---GYEGKE 144 (520)
T ss_pred cccccccccccccccccccccccccchhhhccCHHHHHHhhhcEEEEeccccccCCCCCHHHHHHHHHHHc---CCCHHH
Confidence 1110 0 1134568999997 67888899999998865432 123344
Q ss_pred HHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhh-CC
Q 000808 801 QKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TG 879 (1275)
Q Consensus 801 ~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~-~g 879 (1275)
.++++.++++.+||.+..+..+ ..|||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++++ .|
T Consensus 145 ~~~~~~~~l~~~gl~~~~~~~~-----~~LSgGq~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~g 219 (520)
T TIGR03269 145 AVGRAVDLIEMVQLSHRITHIA-----RDLSGGEKQRVVLARQLAKEPFLFLADEPTGTLDPQTAKLVHNALEEAVKASG 219 (520)
T ss_pred HHHHHHHHHHHcCChhhhhcCc-----ccCCHHHHHHHHHHHHHhcCCCEEEeeCCcccCCHHHHHHHHHHHHHHHHhcC
Confidence 5567899999999988777665 47999999999999999999999999999999999999999999999865 48
Q ss_pred CEEEEEecCCCHHHHHhhhhhheeecCcEEEEECCCC
Q 000808 880 RTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVGPLG 916 (1275)
Q Consensus 880 ~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~~ 916 (1275)
+|||+++|+++ .+.+.+|++++|++ |++++.|+.+
T Consensus 220 ~tviivtHd~~-~~~~~~d~i~~l~~-G~i~~~g~~~ 254 (520)
T TIGR03269 220 ISMVLTSHWPE-VIEDLSDKAIWLEN-GEIKEEGTPD 254 (520)
T ss_pred cEEEEEeCCHH-HHHHhcCEEEEEeC-CEEeeecCHH
Confidence 99999999986 46678999999986 7888888763
No 333
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2.5e-34 Score=337.98 Aligned_cols=193 Identities=22% Similarity=0.390 Sum_probs=157.3
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCccc---cceEEEeccccccCCCCCHHHHHHHHHhccCC
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFVP---QRTAAYISQHDVHIGEMTVRETLAFSARCQGV 77 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~~~---~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~ 77 (1275)
.||||||||+||||+.++|...++|+ +|+|++||+|+++.+. |+.+|+|.|+|.+|. .||+|||.|+...
T Consensus 496 ~vALVGPSGsGKSTiasLL~rfY~Pt---sG~IllDG~~i~~~~~~~lr~~Ig~V~QEPvLFs-~sI~eNI~YG~~~--- 568 (716)
T KOG0058|consen 496 VVALVGPSGSGKSTIASLLLRFYDPT---SGRILLDGVPISDINHKYLRRKIGLVGQEPVLFS-GSIRENIAYGLDN--- 568 (716)
T ss_pred EEEEECCCCCCHHHHHHHHHHhcCCC---CCeEEECCeehhhcCHHHHHHHeeeeeccceeec-ccHHHHHhcCCCC---
Confidence 48999999999999999999999998 9999999999987764 589999999999885 5999999997541
Q ss_pred CCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhhHHH
Q 000808 78 GSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGE 157 (1275)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~ 157 (1275)
.+.++...+|.+. .+++. ..+++++.||.||+++. .||||||||++|||
T Consensus 569 ----------------------~t~e~i~~AAk~A------Nah~F--I~~~p~gY~T~VGEkG~-qLSGGQKQRIAIAR 617 (716)
T KOG0058|consen 569 ----------------------ATDEEIEAAAKMA------NAHEF--ITNFPDGYNTVVGEKGS-QLSGGQKQRIAIAR 617 (716)
T ss_pred ----------------------CCHHHHHHHHHHh------ChHHH--HHhCccccccccCCccc-cccchHHHHHHHHH
Confidence 1111112222111 11112 23589999999997665 79999999999999
Q ss_pred HHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhhHHH
Q 000808 158 MMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVLD 235 (1275)
Q Consensus 158 al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~~~~ 235 (1275)
||+.||+||+|||.||+||+++...+.+.|.+..+ +.++++|.|.. +..+.+|+|+++++|++++.|+++|+++
T Consensus 618 ALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~---~rTVlvIAHRL-STV~~Ad~Ivvi~~G~V~E~G~h~eLl~ 691 (716)
T KOG0058|consen 618 ALLRNPRVLILDEATSALDAESEYLVQEALDRLMQ---GRTVLVIAHRL-STVRHADQIVVIDKGRVVEMGTHDELLS 691 (716)
T ss_pred HHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhc---CCeEEEEehhh-hHhhhccEEEEEcCCeEEecccHHHHhh
Confidence 99999999999999999999999999999987643 34555566665 5677899999999999999999999875
No 334
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=5.3e-34 Score=362.79 Aligned_cols=212 Identities=26% Similarity=0.405 Sum_probs=174.2
Q ss_pred cEEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCcc
Q 000808 676 HSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 755 (1275)
Q Consensus 676 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~ 755 (1275)
..++++|++++|+.. +++++|+|+|++++|||++||+||||||||||+|+|+|..++ .+|+|.+||.+
T Consensus 477 ~~I~~~nVsf~Y~~~----------~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p--~~G~I~idg~~ 544 (711)
T TIGR00958 477 GLIEFQDVSFSYPNR----------PDVPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQP--TGGQVLLDGVP 544 (711)
T ss_pred CeEEEEEEEEECCCC----------CCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCC--CCCEEEECCEE
Confidence 469999999998521 124699999999999999999999999999999999998763 48999999998
Q ss_pred CCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCcc-------ccccccCC
Q 000808 756 KKQ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPL-------RQSLVGLP 825 (1275)
Q Consensus 756 ~~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~-------~~~~~~~~ 825 (1275)
+++ ..+++.++||+|++.+++ .|++||+.++. + +.+ ++.+.++++..++.+. .|+.+|..
T Consensus 545 i~~~~~~~lr~~i~~v~Q~~~lF~-gTIreNI~~g~----~-~~~----~e~i~~al~~a~l~~~i~~lp~GldT~ige~ 614 (711)
T TIGR00958 545 LVQYDHHYLHRQVALVGQEPVLFS-GSVRENIAYGL----T-DTP----DEEIMAAAKAANAHDFIMEFPNGYDTEVGEK 614 (711)
T ss_pred HHhcCHHHHHhhceEEecCccccc-cCHHHHHhcCC----C-CCC----HHHHHHHHHHcCCHHHHHhCCCccCCcccCC
Confidence 653 346778999999998886 69999997642 1 222 2346677777776543 35566643
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeec
Q 000808 826 GESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKR 905 (1275)
Q Consensus 826 ~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~ 905 (1275)
..+||||||||++|||||+++|+|++||||||+||+++++.+.+ .. ..+++|+|+++|+++ ..+.+|+|++|++
T Consensus 615 -G~~LSGGQkQRlalARALl~~p~ILILDEpTSaLD~~te~~i~~-~~--~~~~~TvIiItHrl~--~i~~aD~IivL~~ 688 (711)
T TIGR00958 615 -GSQLSGGQKQRIAIARALVRKPRVLILDEATSALDAECEQLLQE-SR--SRASRTVLLIAHRLS--TVERADQILVLKK 688 (711)
T ss_pred -CCcCCHHHHHHHHHHHHHhcCCCEEEEEccccccCHHHHHHHHH-hh--ccCCCeEEEEeccHH--HHHhCCEEEEEEC
Confidence 35799999999999999999999999999999999999999988 22 235899999999975 5678999999985
Q ss_pred CcEEEEECCCC
Q 000808 906 GGQEIYVGPLG 916 (1275)
Q Consensus 906 gg~~~~~g~~~ 916 (1275)
|+++..|+.+
T Consensus 689 -G~ive~Gt~~ 698 (711)
T TIGR00958 689 -GSVVEMGTHK 698 (711)
T ss_pred -CEEEEeeCHH
Confidence 7999999863
No 335
>cd03215 ABC_Carb_Monos_II This family represents domain II of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. In members of Carb_Monos family the single hydrophobic gene product forms a homodimer, while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=100.00 E-value=2e-33 Score=297.22 Aligned_cols=160 Identities=26% Similarity=0.440 Sum_probs=141.2
Q ss_pred eeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCCcc----cccceEEEeccCC---CCCCC
Q 000808 705 LLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQE----TFTRISGYCEQND---IHSPF 777 (1275)
Q Consensus 705 iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~~----~~~~~~~~v~q~~---~~~~~ 777 (1275)
+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.... ..++.++|++|++ .+++.
T Consensus 15 ~l~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~ 92 (182)
T cd03215 15 AVRDVSFEVRAGEIVGIAGLVGNGQTELAEALFGLRP--PASGEITLDGKPVTRRSPRDAIRAGIAYVPEDRKREGLVLD 92 (182)
T ss_pred eecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEECCccCHHHHHhCCeEEecCCcccCcccCC
Confidence 8999999999999999999999999999999999866 3479999999876431 2356799999984 57788
Q ss_pred CCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCC
Q 000808 778 VTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPT 857 (1275)
Q Consensus 778 ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~~l~~~p~illlDEPt 857 (1275)
+|++||+.+... ||||||||++|||||+.+|++++|||||
T Consensus 93 ~t~~e~l~~~~~----------------------------------------LS~G~~qrl~la~al~~~p~llllDEP~ 132 (182)
T cd03215 93 LSVAENIALSSL----------------------------------------LSGGNQQKVVLARWLARDPRVLILDEPT 132 (182)
T ss_pred CcHHHHHHHHhh----------------------------------------cCHHHHHHHHHHHHHccCCCEEEECCCC
Confidence 999999975320 8999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcE
Q 000808 858 SGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQ 908 (1275)
Q Consensus 858 sgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~ 908 (1275)
+|||+.++..+.+.|+++.++|+|+|+++|+++ ++.+.+|++++|++ |+
T Consensus 133 ~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~-~~~~~~d~v~~l~~-G~ 181 (182)
T cd03215 133 RGVDVGAKAEIYRLIRELADAGKAVLLISSELD-ELLGLCDRILVMYE-GR 181 (182)
T ss_pred cCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEecC-Cc
Confidence 999999999999999998777899999999975 57788999999986 44
No 336
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminus, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resistance lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=1.8e-33 Score=308.31 Aligned_cols=210 Identities=23% Similarity=0.332 Sum_probs=166.4
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 756 (1275)
.++++|++++++. +++.+|+|+||++++||+++|+||||||||||+++|+|... +.+|+|.++|.+.
T Consensus 2 ~l~~~~l~~~~~~-----------~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~ 68 (221)
T cd03244 2 DIEFKNVSLRYRP-----------NLPPVLKNISFSIKPGEKVGIVGRTGSGKSSLLLALFRLVE--LSSGSILIDGVDI 68 (221)
T ss_pred cEEEEEEEEecCC-----------CCcccccceEEEECCCCEEEEECCCCCCHHHHHHHHHcCCC--CCCCEEEECCEEh
Confidence 4788999887631 12469999999999999999999999999999999999865 3479999999875
Q ss_pred Cc---ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCcccccc-cc-----CCCC
Q 000808 757 KQ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSL-VG-----LPGE 827 (1275)
Q Consensus 757 ~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~-~~-----~~~~ 827 (1275)
.. ..+++.++|++|++.+++ .|++||+.+.. ... .+.+.+.++.+++.+..+.. .| ....
T Consensus 69 ~~~~~~~~~~~i~~~~q~~~l~~-~tv~enl~~~~------~~~----~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~ 137 (221)
T cd03244 69 SKIGLHDLRSRISIIPQDPVLFS-GTIRSNLDPFG------EYS----DEELWQALERVGLKEFVESLPGGLDTVVEEGG 137 (221)
T ss_pred HhCCHHHHhhhEEEECCCCcccc-chHHHHhCcCC------CCC----HHHHHHHHHHhCcHHHHHhcccccccccccCC
Confidence 32 234567999999988776 59999986421 111 12355667777765543321 00 1124
Q ss_pred CCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCc
Q 000808 828 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGG 907 (1275)
Q Consensus 828 ~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg 907 (1275)
..||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++.+ +.|||+++|+++ ++ ..+|++++|++ |
T Consensus 138 ~~LS~G~~qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tii~~sh~~~-~~-~~~d~i~~l~~-g 213 (221)
T cd03244 138 ENLSVGQRQLLCLARALLRKSKILVLDEATASVDPETDALIQKTIREAFK-DCTVLTIAHRLD-TI-IDSDRILVLDK-G 213 (221)
T ss_pred CcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhcC-CCEEEEEeCCHH-HH-hhCCEEEEEEC-C
Confidence 67999999999999999999999999999999999999999999999864 689999999985 34 45899999986 7
Q ss_pred EEEEECC
Q 000808 908 QEIYVGP 914 (1275)
Q Consensus 908 ~~~~~g~ 914 (1275)
+++..|+
T Consensus 214 ~~~~~~~ 220 (221)
T cd03244 214 RVVEFDS 220 (221)
T ss_pred eEEecCC
Confidence 8888775
No 337
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=4.8e-34 Score=295.97 Aligned_cols=204 Identities=25% Similarity=0.335 Sum_probs=169.5
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCcccc----ceEEEeccccccCCCCCHHHHHHHHHhccC
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFVPQ----RTAAYISQHDVHIGEMTVRETLAFSARCQG 76 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~~~~----~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~ 76 (1275)
+++|+||||||||||+|+|+|.++|+ +|+|.++|++++...++ ..++.-+|...+|+++||.||+..++..+.
T Consensus 32 i~~LIGPNGAGKTTlfNlitG~~~P~---~G~v~~~G~~it~l~p~~iar~Gi~RTFQ~~rlF~~lTVlENv~va~~~~~ 108 (250)
T COG0411 32 IVGLIGPNGAGKTTLFNLITGFYKPS---SGTVIFRGRDITGLPPHRIARLGIARTFQITRLFPGLTVLENVAVGAHARL 108 (250)
T ss_pred EEEEECCCCCCceeeeeeecccccCC---CceEEECCcccCCCCHHHHHhccceeecccccccCCCcHHHHHHHHhhhhh
Confidence 58999999999999999999999998 99999999999876543 457888999999999999999999865431
Q ss_pred CCCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhhHH
Q 000808 77 VGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTG 156 (1275)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA 156 (1275)
. +.......+ ...+..+..+....+|+.+||.+.+|+..| +||+|||||+.||
T Consensus 109 ~---~~~~l~~~~-------------------~~~~e~~~~e~A~~~Le~vgL~~~a~~~A~-----~LsyG~qR~LEIA 161 (250)
T COG0411 109 G---LSGLLGRPR-------------------ARKEEREARERARELLEFVGLGELADRPAG-----NLSYGQQRRLEIA 161 (250)
T ss_pred h---hhhhhcccc-------------------chhhHHHHHHHHHHHHHHcCCchhhcchhh-----cCChhHhHHHHHH
Confidence 0 000000000 000112334456789999999999887665 5999999999999
Q ss_pred HHHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhhHHH
Q 000808 157 EMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVLD 235 (1275)
Q Consensus 157 ~al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~~~~ 235 (1275)
|||+.+|++|+||||.+||.+....++.+.++++.+ ..+.+|+.+.|+++-+..+||||+||+.|+++.+|+|+++.+
T Consensus 162 rALa~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~-~~g~tillIEHdM~~Vm~l~dri~Vl~~G~~IAeG~P~eV~~ 239 (250)
T COG0411 162 RALATQPKLLLLDEPAAGLNPEETEELAELIRELRD-RGGVTILLIEHDMKLVMGLADRIVVLNYGEVIAEGTPEEVRN 239 (250)
T ss_pred HHHhcCCCEEEecCccCCCCHHHHHHHHHHHHHHHh-cCCcEEEEEEeccHHHhhhccEEEeccCCcCcccCCHHHHhc
Confidence 999999999999999999999999999999999865 346788889999999999999999999999999999999864
No 338
>COG4148 ModC ABC-type molybdate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.3e-34 Score=297.25 Aligned_cols=186 Identities=26% Similarity=0.389 Sum_probs=161.0
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCc-------cccceEEEeccccccCCCCCHHHHHHHHHh
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEF-------VPQRTAAYISQHDVHIGEMTVRETLAFSAR 73 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~-------~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~ 73 (1275)
+|||-|+||||||||+|+|+|+..|+ +|.|.+||..+.+. ..+|.+|||+|+--+||.+||+-|+.|+..
T Consensus 26 vTAlFG~SGsGKTslin~IaGL~rPd---eG~I~lngr~L~Ds~k~i~lp~~~RriGYVFQDARLFpH~tVrgNL~YG~~ 102 (352)
T COG4148 26 ITALFGPSGSGKTSLINMIAGLTRPD---EGRIELNGRVLVDAEKGIFLPPEKRRIGYVFQDARLFPHYTVRGNLRYGMW 102 (352)
T ss_pred eEEEecCCCCChhhHHHHHhccCCcc---ccEEEECCEEeecccCCcccChhhheeeeEeeccccccceEEecchhhhhc
Confidence 58999999999999999999999998 99999999765332 235889999999999999999999999653
Q ss_pred ccCCCCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchh
Q 000808 74 CQGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRV 153 (1275)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv 153 (1275)
.. .....|.+.+.||+++.. ++++.+|||||||||
T Consensus 103 ~~----------------------------------------~~~~fd~iv~lLGI~hLL-----~R~P~~LSGGEkQRV 137 (352)
T COG4148 103 KS----------------------------------------MRAQFDQLVALLGIEHLL-----DRYPGTLSGGEKQRV 137 (352)
T ss_pred cc----------------------------------------chHhHHHHHHHhCcHHHH-----hhCCCccCcchhhHH
Confidence 11 011246678889998765 466778999999999
Q ss_pred hHHHHHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhhH
Q 000808 154 TTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELV 233 (1275)
Q Consensus 154 siA~al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~~ 233 (1275)
+|+|||++.|++|+||||.+.||-.-..+++-.|.++.++. +.-|+.++|..+|+.+++|+|++|++|||...|+.+++
T Consensus 138 AIGRALLt~P~LLLmDEPLaSLD~~RK~EilpylERL~~e~-~IPIlYVSHS~~Ev~RLAd~vV~le~GkV~A~g~~e~v 216 (352)
T COG4148 138 AIGRALLTAPELLLMDEPLASLDLPRKREILPYLERLRDEI-NIPILYVSHSLDEVLRLADRVVVLENGKVKASGPLEEV 216 (352)
T ss_pred HHHHHHhcCCCeeeecCchhhcccchhhHHHHHHHHHHHhc-CCCEEEEecCHHHHHhhhheEEEecCCeEEecCcHHHH
Confidence 99999999999999999999999999999999999987655 45566689999999999999999999999999999887
Q ss_pred HH
Q 000808 234 LD 235 (1275)
Q Consensus 234 ~~ 235 (1275)
.+
T Consensus 217 ~~ 218 (352)
T COG4148 217 WG 218 (352)
T ss_pred hc
Confidence 53
No 339
>cd03217 ABC_FeS_Assembly ABC-type transport system involved in Fe-S cluster assembly, ATPase component. Biosynthesis of iron-sulfur clusters (Fe-S) depends on multiprotein systems. The SUF system of E. coli and Erwinia chrysanthemi is important for Fe-S biogenesis under stressful conditions. The SUF system is made of six proteins: SufC is an atypical cytoplasmic ABC-ATPase, which forms a complex with SufB and SufD; SufA plays the role of a scaffold protein for assembly of iron-sulfur clusters and delivery to target proteins; SufS is a cysteine desulfurase which mobilizes the sulfur atom from cysteine and provides it to the cluster; SufE has no associated function yet.
Probab=100.00 E-value=3.6e-33 Score=299.89 Aligned_cols=183 Identities=25% Similarity=0.305 Sum_probs=152.7
Q ss_pred EEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCCc
Q 000808 679 TFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 758 (1275)
Q Consensus 679 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 758 (1275)
+++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|.....+.+|+|.+||.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~p~~G~i~~~g~~~~~ 68 (200)
T cd03217 2 EIKDLHVSVG-------------GKEILKGVNLTIKKGEVHALMGPNGSGKSTLAKTIMGHPKYEVTEGEILFKGEDITD 68 (200)
T ss_pred eEEEEEEEeC-------------CEEeeeccceEECCCcEEEEECCCCCCHHHHHHHHhCCCcCCCCccEEEECCEECCc
Confidence 5778887763 235999999999999999999999999999999999974111458999999987643
Q ss_pred c---c-ccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHH
Q 000808 759 E---T-FTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQ 834 (1275)
Q Consensus 759 ~---~-~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGe 834 (1275)
. . .++.++|++|++.+++..|+++++. .. .+.|||||
T Consensus 69 ~~~~~~~~~~i~~v~q~~~~~~~~~~~~~l~----------------------------------~~-----~~~LS~G~ 109 (200)
T cd03217 69 LPPEERARLGIFLAFQYPPEIPGVKNADFLR----------------------------------YV-----NEGFSGGE 109 (200)
T ss_pred CCHHHHhhCcEEEeecChhhccCccHHHHHh----------------------------------hc-----cccCCHHH
Confidence 1 1 2345899999988888888877650 00 13599999
Q ss_pred HHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHH-hhhhhheeecCcEEEEEC
Q 000808 835 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFE-SFDELFLMKRGGQEIYVG 913 (1275)
Q Consensus 835 rqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~-~~d~~~~l~~gg~~~~~g 913 (1275)
|||++|||+|+.+|++++|||||+|||+.++..+.+.|++++++|+|||+++|+++ .+.+ .+|++++|++ |+++..|
T Consensus 110 ~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~L~~~~~~~~tiii~sh~~~-~~~~~~~d~i~~l~~-G~i~~~~ 187 (200)
T cd03217 110 KKRNEILQLLLLEPDLAILDEPDSGLDIDALRLVAEVINKLREEGKSVLIITHYQR-LLDYIKPDRVHVLYD-GRIVKSG 187 (200)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhhCCEEEEEEC-CEEEEEc
Confidence 99999999999999999999999999999999999999998777899999999975 3444 6999999986 7899988
Q ss_pred CC
Q 000808 914 PL 915 (1275)
Q Consensus 914 ~~ 915 (1275)
+.
T Consensus 188 ~~ 189 (200)
T cd03217 188 DK 189 (200)
T ss_pred cH
Confidence 54
No 340
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-33 Score=349.93 Aligned_cols=220 Identities=20% Similarity=0.260 Sum_probs=179.0
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 756 (1275)
-++++|+++++... .+..++|+||||++++||++||+||||||||||+++|+|...+ .+|+|.++|...
T Consensus 12 ~l~v~~l~~~y~~~---------~~~~~~l~~is~~v~~Ge~~~lvG~nGsGKSTLl~~l~Gll~p--~~G~i~~~g~~~ 80 (623)
T PRK10261 12 VLAVENLNIAFMQE---------QQKIAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQ--AGGLVQCDKMLL 80 (623)
T ss_pred eEEEeceEEEecCC---------CCceeEEEeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCC--CCeEEEECCEEe
Confidence 48899999887421 1124699999999999999999999999999999999998653 368888887532
Q ss_pred C-------------cc---cc-cceEEEeccCC--CCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCc-
Q 000808 757 K-------------QE---TF-TRISGYCEQND--IHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNP- 816 (1275)
Q Consensus 757 ~-------------~~---~~-~~~~~~v~q~~--~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~- 816 (1275)
. .. .. ++.+|||+|++ .+++.+||.|++.+...... ..+..+.+++++++++.+||.+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~r~~~ig~v~Q~~~~~l~~~~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gL~~~ 158 (623)
T PRK10261 81 RRRSRQVIELSEQSAAQMRHVRGADMAMIFQEPMTSLNPVFTVGEQIAESIRLHQ--GASREEAMVEAKRMLDQVRIPEA 158 (623)
T ss_pred ccccccccccccCCHHHHHHHhCCCEEEEEeCchhhcCCCCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHCCCCCh
Confidence 1 00 11 24689999997 67888999999998765421 2234445567899999999964
Q ss_pred --cccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHH
Q 000808 817 --LRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDI 893 (1275)
Q Consensus 817 --~~~~~~~~~~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~ 893 (1275)
..+..+ ..|||||||||+||+||+.+|++|||||||++||+.++..+.++|++++++ |+|||++||++. .+
T Consensus 159 ~~~~~~~~-----~~LSgGq~QRv~iA~AL~~~P~lLllDEPt~~LD~~~~~~l~~ll~~l~~~~g~tvi~itHdl~-~~ 232 (623)
T PRK10261 159 QTILSRYP-----HQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQKEMSMGVIFITHDMG-VV 232 (623)
T ss_pred hhHHhCCC-----ccCCHHHHHHHHHHHHHhCCCCEEEEeCCCCccCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HH
Confidence 345544 479999999999999999999999999999999999999999999999765 899999999975 56
Q ss_pred HHhhhhhheeecCcEEEEECCCC
Q 000808 894 FESFDELFLMKRGGQEIYVGPLG 916 (1275)
Q Consensus 894 ~~~~d~~~~l~~gg~~~~~g~~~ 916 (1275)
.+.+|++++|++ |+++..|++.
T Consensus 233 ~~~adri~vl~~-G~i~~~g~~~ 254 (623)
T PRK10261 233 AEIADRVLVMYQ-GEAVETGSVE 254 (623)
T ss_pred HHhCCEEEEeeC-CeecccCCHH
Confidence 788999999996 7999888763
No 341
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=4.6e-33 Score=343.88 Aligned_cols=222 Identities=20% Similarity=0.256 Sum_probs=179.5
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCc---eEEEEEEEcC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITISG 753 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~---~~~G~i~~~g 753 (1275)
-++++|++++++.. ...+.+|+|+||++++||++||+||||||||||+++|+|..++. +.+|+|.++|
T Consensus 5 ~l~~~~l~~~~~~~---------~~~~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g 75 (529)
T PRK15134 5 LLAIENLSVAFRQQ---------QTVRTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHG 75 (529)
T ss_pred eEEEeceEEEecCC---------CCceeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECC
Confidence 37889999887410 01246999999999999999999999999999999999976531 2589999999
Q ss_pred ccCCcc------cc-cceEEEeccCCC--CCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCcc---cccc
Q 000808 754 YPKKQE------TF-TRISGYCEQNDI--HSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPL---RQSL 821 (1275)
Q Consensus 754 ~~~~~~------~~-~~~~~~v~q~~~--~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~---~~~~ 821 (1275)
.++... .. ++.+||++|++. +.+.+|+.|++.+...... ..+..+.+++++++++.+||.+. .++.
T Consensus 76 ~~i~~~~~~~~~~~~~~~ig~v~Q~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~ 153 (529)
T PRK15134 76 ESLLHASEQTLRGVRGNKIAMIFQEPMVSLNPLHTLEKQLYEVLSLHR--GMRREAARGEILNCLDRVGIRQAAKRLTDY 153 (529)
T ss_pred EecccCCHHHHHHHhcCceEEEecCchhhcCchhhHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHCCCCChHHHHhhC
Confidence 876421 11 246899999974 5677899999876432211 22344456778999999999763 3555
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhhhh
Q 000808 822 VGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDEL 900 (1275)
Q Consensus 822 ~~~~~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~ 900 (1275)
+ ..|||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ .+...+|++
T Consensus 154 ~-----~~LSgGe~qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~-~~~~~~dri 227 (529)
T PRK15134 154 P-----HQLSGGERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQQELNMGLLFITHNLS-IVRKLADRV 227 (529)
T ss_pred C-----cccCHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHHHHHhcCCeEEEEcCcHH-HHHHhcCEE
Confidence 4 479999999999999999999999999999999999999999999998765 899999999986 466789999
Q ss_pred heeecCcEEEEECCCC
Q 000808 901 FLMKRGGQEIYVGPLG 916 (1275)
Q Consensus 901 ~~l~~gg~~~~~g~~~ 916 (1275)
++|++ |++++.|++.
T Consensus 228 ~~l~~-G~i~~~g~~~ 242 (529)
T PRK15134 228 AVMQN-GRCVEQNRAA 242 (529)
T ss_pred EEEEC-CEEEEeCCHH
Confidence 99996 7899998763
No 342
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.3e-33 Score=312.62 Aligned_cols=208 Identities=26% Similarity=0.402 Sum_probs=161.7
Q ss_pred EEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCCc
Q 000808 679 TFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 758 (1275)
Q Consensus 679 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 758 (1275)
+++|+++.+. +++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++..
T Consensus 2 ~~~~l~~~~~------------~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~--~~~G~v~~~g~~~~~ 67 (236)
T cd03253 2 EFENVTFAYD------------PGRPVLKDVSFTIPAGKKVAIVGPSGSGKSTILRLLFRFYD--VSSGSILIDGQDIRE 67 (236)
T ss_pred EEEEEEEEeC------------CCCceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccC--CCCCEEEECCEEhhh
Confidence 5778877652 12359999999999999999999999999999999999865 358999999987532
Q ss_pred ---ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccc-------cccCCCCC
Q 000808 759 ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQS-------LVGLPGES 828 (1275)
Q Consensus 759 ---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~-------~~~~~~~~ 828 (1275)
..+++.++|++|++.+++ .|++||+.+... ...... +.+.++..++.+..+. ... ...+
T Consensus 68 ~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~-----~~~~~~----~~~~~~~~~l~~~~~~l~~~~~~~~~-~~~~ 136 (236)
T cd03253 68 VTLDSLRRAIGVVPQDTVLFN-DTIGYNIRYGRP-----DATDEE----VIEAAKAAQIHDKIMRFPDGYDTIVG-ERGL 136 (236)
T ss_pred CCHHHHHhhEEEECCCChhhc-chHHHHHhhcCC-----CCCHHH----HHHHHHHcCcHHHHHhccccccchhh-cCCC
Confidence 234567899999988875 699999976531 111111 2333344443322111 111 1235
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcE
Q 000808 829 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQ 908 (1275)
Q Consensus 829 ~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~ 908 (1275)
.||||||||++|||+|+.+|++++|||||+|||+.+...+.+.|+++.+ |+|||+++|+++ .+ ..+|++++|++ |+
T Consensus 137 ~LS~G~~~rl~la~aL~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sh~~~-~~-~~~d~~~~l~~-g~ 212 (236)
T cd03253 137 KLSGGEKQRVAIARAILKNPPILLLDEATSALDTHTEREIQAALRDVSK-GRTTIVIAHRLS-TI-VNADKIIVLKD-GR 212 (236)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHhcC-CCEEEEEcCCHH-HH-HhCCEEEEEEC-CE
Confidence 7999999999999999999999999999999999999999999999876 899999999986 34 45999999986 78
Q ss_pred EEEECCC
Q 000808 909 EIYVGPL 915 (1275)
Q Consensus 909 ~~~~g~~ 915 (1275)
++..|+.
T Consensus 213 i~~~~~~ 219 (236)
T cd03253 213 IVERGTH 219 (236)
T ss_pred EEeeCCH
Confidence 8888875
No 343
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.3e-33 Score=276.65 Aligned_cols=191 Identities=22% Similarity=0.341 Sum_probs=162.6
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCccccceEEEeccccccCCCCCHHHHHHHHHhccCCCCc
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFVPQRTAAYISQHDVHIGEMTVRETLAFSARCQGVGSR 80 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~ 80 (1275)
.++++||||||||||||+++|.++|. .|+|.+||++++... ..-|.|+|++.++|-+||.||+.|+.+++++++
T Consensus 33 ~vv~lGpSGcGKTTLLnl~AGf~~P~---~G~i~l~~r~i~gPg--aergvVFQ~~~LlPWl~~~dNvafgL~l~Gi~k- 106 (259)
T COG4525 33 LVVVLGPSGCGKTTLLNLIAGFVTPS---RGSIQLNGRRIEGPG--AERGVVFQNEALLPWLNVIDNVAFGLQLRGIEK- 106 (259)
T ss_pred EEEEEcCCCccHHHHHHHHhcCcCcc---cceEEECCEeccCCC--ccceeEeccCccchhhHHHHHHHHHHHhcCCCH-
Confidence 36899999999999999999999997 999999999886543 245899999999999999999999999887532
Q ss_pred chhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhhHHHHHh
Q 000808 81 YDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEMMV 160 (1275)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~al~ 160 (1275)
.++..++...+...||++..+.. +-.|||||||||.|||||+
T Consensus 107 ---------------------------------~~R~~~a~q~l~~VgL~~~~~~~-----i~qLSGGmrQRvGiARALa 148 (259)
T COG4525 107 ---------------------------------AQRREIAHQMLALVGLEGAEHKY-----IWQLSGGMRQRVGIARALA 148 (259)
T ss_pred ---------------------------------HHHHHHHHHHHHHhCcccccccc-----eEeecchHHHHHHHHHHhh
Confidence 11223466788999998876544 4579999999999999999
Q ss_pred cCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEec--CCeEEEecChhhHHHH
Q 000808 161 GPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLS--DAQIVYQGPRELVLDF 236 (1275)
Q Consensus 161 ~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~--~G~i~~~G~~~~~~~~ 236 (1275)
.+|++|+||||+++||+-+++++.+.|.+..+..+ .-++.++|..+|+.-+++++++|+ .|+|+..-+++..+.|
T Consensus 149 ~eP~~LlLDEPfgAlDa~tRe~mQelLldlw~~tg-k~~lliTH~ieEAlflatrLvvlsp~pgRvv~~~~~df~rR~ 225 (259)
T COG4525 149 VEPQLLLLDEPFGALDALTREQMQELLLDLWQETG-KQVLLITHDIEEALFLATRLVVLSPGPGRVVERLPLDFARRY 225 (259)
T ss_pred cCcceEeecCchhhHHHHHHHHHHHHHHHHHHHhC-CeEEEEeccHHHHHhhhheeEEecCCCceeeEecCCCHHHHh
Confidence 99999999999999999999999999998877654 455568999999999999999998 5899988777655443
No 344
>KOG0066 consensus eIF2-interacting protein ABC50 (ABC superfamily) [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=2.3e-32 Score=297.07 Aligned_cols=194 Identities=20% Similarity=0.303 Sum_probs=147.3
Q ss_pred CCcEEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcC
Q 000808 674 EPHSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISG 753 (1275)
Q Consensus 674 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g 753 (1275)
.|..+-+.||+|.++ +.++++++++|-|.--..++|+||||.||||||+.|.|...+ ..|+..-|
T Consensus 583 ~PPvLGlH~VtFgy~------------gqkpLFkkldFGiDmdSRiaIVGPNGVGKSTlLkLL~Gkl~P--~~GE~RKn- 647 (807)
T KOG0066|consen 583 NPPVLGLHDVTFGYP------------GQKPLFKKLDFGIDMDSRIAIVGPNGVGKSTLLKLLIGKLDP--NDGELRKN- 647 (807)
T ss_pred CCCeeecccccccCC------------CCCchhhcccccccccceeEEECCCCccHHHHHHHHhcCCCC--Ccchhhcc-
Confidence 356788899998874 456899999999999999999999999999999999998763 35553322
Q ss_pred ccCCcccccceEEEeccCC--CCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCC
Q 000808 754 YPKKQETFTRISGYCEQND--IHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLS 831 (1275)
Q Consensus 754 ~~~~~~~~~~~~~~v~q~~--~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lS 831 (1275)
.+-.+|+..|+. .+-..-|.-|.|.-.. +.+.+ .....|-.+||...++++- .+.||
T Consensus 648 -------hrL~iG~FdQh~~E~L~~Eetp~EyLqr~F------Nlpyq----~ARK~LG~fGL~sHAHTik----ikdLS 706 (807)
T KOG0066|consen 648 -------HRLRIGWFDQHANEALNGEETPVEYLQRKF------NLPYQ----EARKQLGTFGLASHAHTIK----IKDLS 706 (807)
T ss_pred -------ceeeeechhhhhHHhhccccCHHHHHHHhc------CCChH----HHHHHhhhhhhhhccceEe----eeecC
Confidence 233578877753 2334457777764221 22222 2456788899998888764 35799
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCc
Q 000808 832 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGG 907 (1275)
Q Consensus 832 gGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg 907 (1275)
||||-||++|..-+..|+||||||||++||.++...+-+.|++. ...||+++||.+. +.+.-+.+.++.+.|
T Consensus 707 GGQKaRValaeLal~~PDvlILDEPTNNLDIESIDALaEAIney---~GgVi~VsHDeRL-i~eT~C~LwVvE~Q~ 778 (807)
T KOG0066|consen 707 GGQKARVALAELALGGPDVLILDEPTNNLDIESIDALAEAINEY---NGGVIMVSHDERL-IVETDCNLWVVENQG 778 (807)
T ss_pred CcchHHHHHHHHhcCCCCEEEecCCCCCcchhhHHHHHHHHHhc---cCcEEEEecccce-eeecCceEEEEccCC
Confidence 99999999999999999999999999999999999999998886 4579999999763 344445556665544
No 345
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=1.6e-33 Score=321.90 Aligned_cols=191 Identities=26% Similarity=0.328 Sum_probs=160.1
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCc--cccceEEEeccccccCCCCCHHHHHHHHHhccCCC
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEF--VPQRTAAYISQHDVHIGEMTVRETLAFSARCQGVG 78 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~--~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~ 78 (1275)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++|++|++.+++.+||+||+.+.+++.+..
T Consensus 21 ~~~l~G~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~ 97 (302)
T TIGR01188 21 VFGFLGPNGAGKTTTIRMLTTLLRPT---SGTARVAGYDVVREPRKVRRSIGIVPQYASVDEDLTGRENLEMMGRLYGLP 97 (302)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccCHHHHHhhcEEecCCCCCCCCCcHHHHHHHHHHHcCCC
Confidence 47999999999999999999999987 99999999887532 22457999999999999999999999876543210
Q ss_pred CcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhhHHHH
Q 000808 79 SRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEM 158 (1275)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~a 158 (1275)
. .+....++++++.+||++..++. ++.|||||||||+||+|
T Consensus 98 ~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSgG~~qrv~la~a 138 (302)
T TIGR01188 98 K----------------------------------DEAEERAEELLELFELGEAADRP-----VGTYSGGMRRRLDIAAS 138 (302)
T ss_pred H----------------------------------HHHHHHHHHHHHHcCChhHhCCc-----hhhCCHHHHHHHHHHHH
Confidence 0 00112356789999998766554 45799999999999999
Q ss_pred HhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhhHHH
Q 000808 159 MVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVLD 235 (1275)
Q Consensus 159 l~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~~~~ 235 (1275)
|+.+|++++|||||+|||+.++..+++.++++.+ . +++|+.++|+.+++.++||+|++|++|++++.|+++++.+
T Consensus 139 l~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~-~-g~tvi~~sH~~~~~~~~~d~v~~l~~G~i~~~g~~~~l~~ 213 (302)
T TIGR01188 139 LIHQPDVLFLDEPTTGLDPRTRRAIWDYIRALKE-E-GVTILLTTHYMEEADKLCDRIAIIDHGRIIAEGTPEELKR 213 (302)
T ss_pred HhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh-C-CCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHH
Confidence 9999999999999999999999999999998754 3 5566678999999999999999999999999999988764
No 346
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.5e-33 Score=289.94 Aligned_cols=191 Identities=23% Similarity=0.351 Sum_probs=155.1
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCccc----cceEEEeccccccCCCCCHHHHHHHHHhccC
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFVP----QRTAAYISQHDVHIGEMTVRETLAFSARCQG 76 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~~~----~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~ 76 (1275)
+++|+||||+||||||++|+|..++. +|+|.++|++++...+ +..++||||....|+.+||+|||..++..+.
T Consensus 31 iv~llG~NGaGKTTlLkti~Gl~~~~---~G~I~~~G~dit~~p~~~r~r~Gi~~VPegR~iF~~LTVeENL~~g~~~~~ 107 (237)
T COG0410 31 IVALLGRNGAGKTTLLKTIMGLVRPR---SGRIIFDGEDITGLPPHERARLGIAYVPEGRRIFPRLTVEENLLLGAYARR 107 (237)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CeeEEECCeecCCCCHHHHHhCCeEeCcccccchhhCcHHHHHhhhhhccc
Confidence 58999999999999999999999876 9999999999977644 3579999999999999999999998764321
Q ss_pred CCCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhC-CccccccccCCCccccccccccchhhH
Q 000808 77 VGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLG-LEVCDDTLVGDEMVRGISGGQKKRVTT 155 (1275)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lg-L~~~~~t~vg~~~~~~LSGGqrqRvsi 155 (1275)
. ++.. + . ..+++.+.|= |.+-. ++...+|||||||-++|
T Consensus 108 ~-~~~~------~----------~------------------~~e~v~~lFP~Lker~-----~~~aG~LSGGEQQMLAi 147 (237)
T COG0410 108 D-KEAQ------E----------R------------------DLEEVYELFPRLKERR-----NQRAGTLSGGEQQMLAI 147 (237)
T ss_pred c-cccc------c----------c------------------cHHHHHHHChhHHHHh-----cCcccCCChHHHHHHHH
Confidence 1 0000 0 0 0112222211 22222 23455799999999999
Q ss_pred HHHHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhhHHH
Q 000808 156 GEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVLD 235 (1275)
Q Consensus 156 A~al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~~~~ 235 (1275)
||||+++|++|+|||||.||-|.-..+|.+.++++.+. .+.+|+.+.|+...+.+++||.++|++|+++++|+.+++.+
T Consensus 148 aRALm~~PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~-~g~tIlLVEQn~~~Al~iaDr~yvle~Griv~~G~~~eL~~ 226 (237)
T COG0410 148 ARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIKELRKE-GGMTILLVEQNARFALEIADRGYVLENGRIVLSGTAAELLA 226 (237)
T ss_pred HHHHhcCCCEEEecCCccCcCHHHHHHHHHHHHHHHHc-CCcEEEEEeccHHHHHHhhCEEEEEeCCEEEEecCHHHHhc
Confidence 99999999999999999999999999999999998754 35678889999999999999999999999999999998864
No 347
>cd03247 ABCC_cytochrome_bd The CYD subfamily implicated in cytochrome bd biogenesis. The CydC and CydD proteins are important for the formation of cytochrome bd terminal oxidase of E. coli and it has been proposed that they were necessary for biosynthesis of the cytochrome bd quinol oxidase and for periplasmic c-type cytochromes. CydCD were proposed to determine a heterooligomeric complex important for heme export into the periplasm or to be involved in the maintenance of the proper redox state of the periplasmic space. In Bacillus subtilius, the absence of CydCD does not affect the presence of halo-cytochrome c in the membrane and this observation suggests that CydCD proteins are not involved in the export of heme in this organism.
Probab=100.00 E-value=2.8e-33 Score=295.22 Aligned_cols=176 Identities=27% Similarity=0.474 Sum_probs=148.5
Q ss_pred EEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCC
Q 000808 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1275)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 757 (1275)
++++|+++.+.. .++.+++|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 1 i~~~~~~~~~~~-----------~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~--~~G~i~~~g~~~~ 67 (178)
T cd03247 1 LSINNVSFSYPE-----------QEQQVLKNLSLELKQGEKIALLGRSGSGKSTLLQLLTGDLKP--QQGEITLDGVPVS 67 (178)
T ss_pred CEEEEEEEEeCC-----------CCccceEEEEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCC--CCCEEEECCEEHH
Confidence 357788877631 113599999999999999999999999999999999998653 4799999998653
Q ss_pred c--ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHH
Q 000808 758 Q--ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQR 835 (1275)
Q Consensus 758 ~--~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGer 835 (1275)
. ..+++.++|++|++.+++ .|++||+ ...||||||
T Consensus 68 ~~~~~~~~~i~~~~q~~~~~~-~tv~~~i------------------------------------------~~~LS~G~~ 104 (178)
T cd03247 68 DLEKALSSLISVLNQRPYLFD-TTLRNNL------------------------------------------GRRFSGGER 104 (178)
T ss_pred HHHHHHHhhEEEEccCCeeec-ccHHHhh------------------------------------------cccCCHHHH
Confidence 2 234567899999987775 6888886 136999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcEEEEEC
Q 000808 836 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVG 913 (1275)
Q Consensus 836 qrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g 913 (1275)
||++|||+|+.+|++++|||||+|||+.++..+++.|+++. +++|||+++|+++ .+ +.+|++++|++ |++++.|
T Consensus 105 qrv~laral~~~p~~lllDEP~~~LD~~~~~~l~~~l~~~~-~~~tii~~sh~~~-~~-~~~d~~~~l~~-g~i~~~~ 178 (178)
T cd03247 105 QRLALARILLQDAPIVLLDEPTVGLDPITERQLLSLIFEVL-KDKTLIWITHHLT-GI-EHMDKILFLEN-GKIIMQG 178 (178)
T ss_pred HHHHHHHHHhcCCCEEEEECCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecCHH-HH-HhCCEEEEEEC-CEEEecC
Confidence 99999999999999999999999999999999999999985 4899999999986 34 57999999986 7887654
No 348
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.4e-34 Score=316.92 Aligned_cols=217 Identities=26% Similarity=0.376 Sum_probs=178.2
Q ss_pred CCcEEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcC
Q 000808 674 EPHSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISG 753 (1275)
Q Consensus 674 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g 753 (1275)
..+.++|+|+++.|+ .+|++|+||||++.||+.+||+||||+||||++++|....+ ..+|.|.|||
T Consensus 534 ~~G~i~fsnvtF~Y~------------p~k~vl~disF~v~pGktvAlVG~SGaGKSTimRlLfRffd--v~sGsI~iDg 599 (790)
T KOG0056|consen 534 TQGKIEFSNVTFAYD------------PGKPVLSDISFTVQPGKTVALVGPSGAGKSTIMRLLFRFFD--VNSGSITIDG 599 (790)
T ss_pred cCCeEEEEEeEEecC------------CCCceeecceEEecCCcEEEEECCCCCchhHHHHHHHHHhh--ccCceEEEcC
Confidence 457899999999986 35689999999999999999999999999999999998655 4589999999
Q ss_pred ccCCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHH--HHH-HHcCCCccccccccCCCC
Q 000808 754 YPKKQ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIE--EIM-ELVELNPLRQSLVGLPGE 827 (1275)
Q Consensus 754 ~~~~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~--~~l-~~l~l~~~~~~~~~~~~~ 827 (1275)
++++. ...|+.+|.||||..+|.+ |+..|+.|+. | +.+.++..+... .+- +.++..+-.++.+|..+.
T Consensus 600 qdIrnvt~~SLRs~IGVVPQDtvLFNd-TI~yNIryak----~-~AsneevyaAAkAA~IHdrIl~fPegY~t~VGERGL 673 (790)
T KOG0056|consen 600 QDIRNVTQSSLRSSIGVVPQDTVLFND-TILYNIRYAK----P-SASNEEVYAAAKAAQIHDRILQFPEGYNTRVGERGL 673 (790)
T ss_pred chHHHHHHHHHHHhcCcccCcceeecc-eeeeheeecC----C-CCChHHHHHHHHHhhHHHHHhcCchhhhhhhhhccc
Confidence 99754 4577889999999988864 8888888752 2 223333222111 111 235666667888886543
Q ss_pred CCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCc
Q 000808 828 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGG 907 (1275)
Q Consensus 828 ~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg 907 (1275)
.|||||||||+|||+++++|.|++|||+||+||..+.+.|+..|.++++ ++|.|++.|+.|. .-.+|.|+++++ |
T Consensus 674 -kLSGGEKQRVAiARtiLK~P~iIlLDEATSALDT~tER~IQaaL~rlca-~RTtIVvAHRLST--ivnAD~ILvi~~-G 748 (790)
T KOG0056|consen 674 -KLSGGEKQRVAIARTILKAPSIILLDEATSALDTNTERAIQAALARLCA-NRTTIVVAHRLST--IVNADLILVISN-G 748 (790)
T ss_pred -ccCCcchhhHHHHHHHhcCCcEEEEcchhhhcCCccHHHHHHHHHHHhc-CCceEEEeeeehh--eecccEEEEEeC-C
Confidence 5999999999999999999999999999999999999999999999875 7899999999873 446799999996 7
Q ss_pred EEEEECCC
Q 000808 908 QEIYVGPL 915 (1275)
Q Consensus 908 ~~~~~g~~ 915 (1275)
+++.-|.-
T Consensus 749 ~IvErG~H 756 (790)
T KOG0056|consen 749 RIVERGRH 756 (790)
T ss_pred eEeecCcH
Confidence 99999875
No 349
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=100.00 E-value=1.4e-33 Score=310.14 Aligned_cols=208 Identities=25% Similarity=0.377 Sum_probs=164.5
Q ss_pred cEEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCcc
Q 000808 676 HSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 755 (1275)
Q Consensus 676 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~ 755 (1275)
..++++|+++.++.. +++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+
T Consensus 10 ~~l~~~~l~~~~~~~----------~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~ 77 (226)
T cd03248 10 GIVKFQNVTFAYPTR----------PDTLVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQ--PQGGQVLLDGKP 77 (226)
T ss_pred ceEEEEEEEEEeCCC----------CCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcC--CCCcEEEECCCc
Confidence 358899999887411 12359999999999999999999999999999999999865 347999999986
Q ss_pred CCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCH---HHHHHHHHHHHHHc--CCCccccccccCCCC
Q 000808 756 KKQ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDS---ETQKMFIEEIMELV--ELNPLRQSLVGLPGE 827 (1275)
Q Consensus 756 ~~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~---~~~~~~~~~~l~~l--~l~~~~~~~~~~~~~ 827 (1275)
... ...++.++|++|++.+++ .|++||+.+..... .... ......+++.++.+ |+.+..+..+
T Consensus 78 ~~~~~~~~~~~~i~~~~q~~~l~~-~tv~~nl~~~~~~~---~~~~~~~~~~~~~~~~~l~~l~~gl~~~~~~~~----- 148 (226)
T cd03248 78 ISQYEHKYLHSKVSLVGQEPVLFA-RSLQDNIAYGLQSC---SFECVKEAAQKAHAHSFISELASGYDTEVGEKG----- 148 (226)
T ss_pred hHHcCHHHHHhhEEEEecccHHHh-hhHHHHhccccCCC---CHHHHHHHHHHcCcHHHHHhccccccchhhcCC-----
Confidence 532 223467899999988776 59999997643211 1100 01112346777877 6766555543
Q ss_pred CCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCc
Q 000808 828 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGG 907 (1275)
Q Consensus 828 ~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg 907 (1275)
+.||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++++ ++|+|+++|+++ ++ ..+|++++|++ |
T Consensus 149 ~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~~sh~~~-~~-~~~d~i~~l~~-g 224 (226)
T cd03248 149 SQLSGGQKQRVAIARALIRNPQVLILDEATSALDAESEQQVQQALYDWPE-RRTVLVIAHRLS-TV-ERADQILVLDG-G 224 (226)
T ss_pred CcCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHcC-CCEEEEEECCHH-HH-HhCCEEEEecC-C
Confidence 57999999999999999999999999999999999999999999999865 689999999986 34 45999999986 4
Q ss_pred E
Q 000808 908 Q 908 (1275)
Q Consensus 908 ~ 908 (1275)
+
T Consensus 225 ~ 225 (226)
T cd03248 225 R 225 (226)
T ss_pred c
Confidence 4
No 350
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=3e-33 Score=346.98 Aligned_cols=213 Identities=29% Similarity=0.414 Sum_probs=173.1
Q ss_pred cEEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCcc
Q 000808 676 HSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 755 (1275)
Q Consensus 676 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~ 755 (1275)
..++++|++++++. +++++|+|+|++++|||+++|+||||||||||+++|+|..+ +.+|+|.+||.+
T Consensus 315 ~~i~~~~v~~~y~~-----------~~~~~l~~~~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~--~~~G~i~~~g~~ 381 (544)
T TIGR01842 315 GHLSVENVTIVPPG-----------GKKPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWP--PTSGSVRLDGAD 381 (544)
T ss_pred CeEEEEEEEEEcCC-----------CCccccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEe
Confidence 46999999998841 22469999999999999999999999999999999999876 348999999987
Q ss_pred CCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCc-------cccccccCC
Q 000808 756 KKQ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNP-------LRQSLVGLP 825 (1275)
Q Consensus 756 ~~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~-------~~~~~~~~~ 825 (1275)
... ..+++.++|++|++.+++. |++||+.+.. .+.+++ .+.++++..++.+ -.|+.+|..
T Consensus 382 i~~~~~~~~~~~i~~v~q~~~lf~~-ti~~Ni~~~~-----~~~~~~----~~~~~~~~~~~~~~i~~l~~gl~t~~~~~ 451 (544)
T TIGR01842 382 LKQWDRETFGKHIGYLPQDVELFPG-TVAENIARFG-----ENADPE----KIIEAAKLAGVHELILRLPDGYDTVIGPG 451 (544)
T ss_pred hhhCCHHHHhhheEEecCCcccccc-cHHHHHhccC-----CCCCHH----HHHHHHHHhChHHHHHhCccccccccCCC
Confidence 643 3456789999999998875 9999997432 122222 2334444444332 224555543
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeec
Q 000808 826 GESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKR 905 (1275)
Q Consensus 826 ~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~ 905 (1275)
...||||||||++|||||+++|++|+|||||||||++++..+.+.|+++..+|+|+|+++|+++ ..+.+|++++|++
T Consensus 452 -g~~LSgGq~qrl~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~ith~~~--~~~~~d~i~~l~~ 528 (544)
T TIGR01842 452 -GATLSGGQRQRIALARALYGDPKLVVLDEPNSNLDEEGEQALANAIKALKARGITVVVITHRPS--LLGCVDKILVLQD 528 (544)
T ss_pred -cCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccccCHHHHHHHHHHHHHHhhCCCEEEEEeCCHH--HHHhCCEEEEEEC
Confidence 4579999999999999999999999999999999999999999999988656899999999985 4678999999986
Q ss_pred CcEEEEECCC
Q 000808 906 GGQEIYVGPL 915 (1275)
Q Consensus 906 gg~~~~~g~~ 915 (1275)
|+++..|+.
T Consensus 529 -G~i~~~g~~ 537 (544)
T TIGR01842 529 -GRIARFGER 537 (544)
T ss_pred -CEEEeeCCH
Confidence 799999986
No 351
>cd03246 ABCC_Protease_Secretion This family represents the ABC component of the protease secretion system PrtD, a 60-kDa integral membrane protein sharing 37% identity with HlyB, the ABC component of the alpha-hemolysin secretion pathway, in the C-terminal domain. They export degradative enzymes by using a type I protein secretion system and lack an N-terminal signal peptide, but contain a C-terminal secretion signal. The Type I secretion apparatus is made up of three components, an ABC transporter, a membrane fusion protein (MFP), and an outer membrane protein (OMP). For the HlyA transporter complex, HlyB (ABC transporter) and HlyD (MFP) reside in the inner membrane of E. coli. The OMP component is TolC, which is thought to interact with the MFP to form a continuous channel across the periplasm from the cytoplasm to the exterior. HlyB belongs to the family of ABC transporters, which are ubiquitous, ATP-dependent transmembrane pumps or channels. The spectrum of transport substra
Probab=100.00 E-value=4e-33 Score=292.39 Aligned_cols=168 Identities=28% Similarity=0.451 Sum_probs=145.0
Q ss_pred EEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCCc
Q 000808 679 TFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 758 (1275)
Q Consensus 679 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 758 (1275)
+++|++++++. .++.+++|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~~-----------~~~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~--~~~G~i~~~g~~~~~ 68 (173)
T cd03246 2 EVENVSFRYPG-----------AEPPVLRNVSFSIEPGESLAIIGPSGSGKSTLARLILGLLR--PTSGRVRLDGADISQ 68 (173)
T ss_pred EEEEEEEEcCC-----------CCCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHHhccC--CCCCeEEECCEEccc
Confidence 57788876631 12459999999999999999999999999999999999865 347999999987642
Q ss_pred ---ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHH
Q 000808 759 ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQR 835 (1275)
Q Consensus 759 ---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGer 835 (1275)
..+++.++|++|++.+++ .|++||+ ||||||
T Consensus 69 ~~~~~~~~~i~~~~q~~~~~~-~tv~~~l---------------------------------------------LS~G~~ 102 (173)
T cd03246 69 WDPNELGDHVGYLPQDDELFS-GSIAENI---------------------------------------------LSGGQR 102 (173)
T ss_pred CCHHHHHhheEEECCCCcccc-CcHHHHC---------------------------------------------cCHHHH
Confidence 234567899999988777 4998876 899999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcE
Q 000808 836 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQ 908 (1275)
Q Consensus 836 qrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~ 908 (1275)
||++|||+|+.+|++++|||||+|||+.++..+.+.|+++.++|+|||+++|+++ .+ +.+|++++|++ |+
T Consensus 103 qrv~la~al~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~-~~-~~~d~v~~l~~-G~ 172 (173)
T cd03246 103 QRLGLARALYGNPRILVLDEPNSHLDVEGERALNQAIAALKAAGATRIVIAHRPE-TL-ASADRILVLED-GR 172 (173)
T ss_pred HHHHHHHHHhcCCCEEEEECCccccCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HH-HhCCEEEEEEC-CC
Confidence 9999999999999999999999999999999999999998777999999999975 34 68999999986 54
No 352
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.1e-33 Score=325.45 Aligned_cols=191 Identities=21% Similarity=0.295 Sum_probs=161.3
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCcc-ccceEEEeccccccCCCCCHHHHHHHHHhccCCCC
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV-PQRTAAYISQHDVHIGEMTVRETLAFSARCQGVGS 79 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~~-~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~ 79 (1275)
+++|+|||||||||||++|+|..+|+ +|+|.++|+++.... .++.+|||+|++.+|+.+||.||+.|+.+.++..
T Consensus 47 ~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~i~g~~i~~~~~~~r~ig~vfQ~~~lfp~ltv~eNi~~~l~~~~~~- 122 (377)
T PRK11607 47 IFALLGASGCGKSTLLRMLAGFEQPT---AGQIMLDGVDLSHVPPYQRPINMMFQSYALFPHMTVEQNIAFGLKQDKLP- 122 (377)
T ss_pred EEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCCccCCCCCHHHHHHHHHHHcCCC-
Confidence 47999999999999999999999987 999999999875433 3578999999999999999999999976532110
Q ss_pred cchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhhHHHHH
Q 000808 80 RYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEMM 159 (1275)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~al 159 (1275)
..+....++++++.+||.+.. ++.+.+|||||||||+|||||
T Consensus 123 ---------------------------------~~~~~~~v~~~l~~l~L~~~~-----~~~~~~LSgGq~QRVaLARAL 164 (377)
T PRK11607 123 ---------------------------------KAEIASRVNEMLGLVHMQEFA-----KRKPHQLSGGQRQRVALARSL 164 (377)
T ss_pred ---------------------------------HHHHHHHHHHHHHHcCCchhh-----cCChhhCCHHHHHHHHHHHHH
Confidence 001122456788999997554 455678999999999999999
Q ss_pred hcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhhHH
Q 000808 160 VGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVL 234 (1275)
Q Consensus 160 ~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~~~ 234 (1275)
+.+|++|||||||++||+.++.++.+.++++.+.. +.+++.++|+.+++..++|++++|++|+++..|+++++.
T Consensus 165 ~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~-g~tii~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~~~ 238 (377)
T PRK11607 165 AKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERV-GVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEIY 238 (377)
T ss_pred hcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEcCCHHHHHHhCCEEEEEeCCEEEEEcCHHHHH
Confidence 99999999999999999999999999998876544 456666899999999999999999999999999998874
No 353
>COG1119 ModF ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.8e-33 Score=289.92 Aligned_cols=218 Identities=23% Similarity=0.356 Sum_probs=181.3
Q ss_pred CcEEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCc
Q 000808 675 PHSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGY 754 (1275)
Q Consensus 675 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~ 754 (1275)
..-++++|++..++ +|+||+|||.+|+|||..+|+|||||||||||++++|...+. +|.+.+.|+
T Consensus 29 ~~li~l~~v~v~r~-------------gk~iL~~isW~V~~ge~W~I~G~NGsGKTTLL~ll~~~~~ps--sg~~~~~G~ 93 (257)
T COG1119 29 EPLIELKNVSVRRN-------------GKKILGDLSWQVNPGEHWAIVGPNGAGKTTLLSLLTGEHPPS--SGDVTLLGR 93 (257)
T ss_pred cceEEecceEEEEC-------------CEeeccccceeecCCCcEEEECCCCCCHHHHHHHHhcccCCC--CCceeeeee
Confidence 34699999998763 567999999999999999999999999999999999976643 788999988
Q ss_pred cCCc----ccccceEEEeccC--CCCCCCCCHHHHHHH--HHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCC
Q 000808 755 PKKQ----ETFTRISGYCEQN--DIHSPFVTVYESLLY--SAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPG 826 (1275)
Q Consensus 755 ~~~~----~~~~~~~~~v~q~--~~~~~~ltv~e~l~~--~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~ 826 (1275)
...+ ...|+.+|+|.-+ ..+.+..+|+|-+.- .+..........++..+++..+++.+|+.+.+|+..+
T Consensus 94 ~~G~~~~~~elrk~IG~vS~~L~~~~~~~~~v~dvVlSg~~~siG~y~~~~~~~~~~~a~~lle~~g~~~la~r~~~--- 170 (257)
T COG1119 94 RFGKGETIFELRKRIGLVSSELHERFRVRETVRDVVLSGFFASIGIYQEDLTAEDLAAAQWLLELLGAKHLADRPFG--- 170 (257)
T ss_pred eccCCcchHHHHHHhCccCHHHHhhcccccccceeeeecccccccccccCCCHHHHHHHHHHHHHcchhhhccCchh---
Confidence 7543 3457889999643 334456788888752 2333333322334556778999999999999999875
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC--CCEEEEEecCCCHHHHHhhhhhheee
Q 000808 827 ESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT--GRTVVCTIHQPSIDIFESFDELFLMK 904 (1275)
Q Consensus 827 ~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~--g~tvi~~~H~~~~~~~~~~d~~~~l~ 904 (1275)
.||-||||||-|||||+.+|++||||||++|||...++.+.+.|.+++.. +.++|++||.+. ++-..|+++++++
T Consensus 171 --~LS~Ge~rrvLiaRALv~~P~LLiLDEP~~GLDl~~re~ll~~l~~~~~~~~~~~ll~VtHh~e-Ei~~~~th~lll~ 247 (257)
T COG1119 171 --SLSQGEQRRVLIARALVKDPELLILDEPAQGLDLIAREQLLNRLEELAASPGAPALLFVTHHAE-EIPPCFTHRLLLK 247 (257)
T ss_pred --hcCHhHHHHHHHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHhcCCCCceEEEEEcchh-hcccccceEEEee
Confidence 69999999999999999999999999999999999999999999998765 789999999986 7889999999999
Q ss_pred cCcEEEEECC
Q 000808 905 RGGQEIYVGP 914 (1275)
Q Consensus 905 ~gg~~~~~g~ 914 (1275)
+ |+++++|.
T Consensus 248 ~-g~v~~~g~ 256 (257)
T COG1119 248 E-GEVVAQGK 256 (257)
T ss_pred C-Cceeeccc
Confidence 6 78998874
No 354
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit. The gene pair cydCD encodes an ABC-family transporter in which each gene contains an N-terminal membrane-spanning domain (pfam00664) and a C-terminal ATP-binding domain (pfam00005). In E. coli these genes were discovered as mutants which caused the terminal heme-copper oxidase complex cytochrome bd to fail to assemble. Recent work has shown that the transporter is involved in export of redox-active thiol compounds such as cysteine and glutathione. The linkage to assembly of the cytochrome bd complex is further supported by the conserved operon structure found outside the gammaproteobacteria (cydABCD) containing both the transporter and oxidase genes components. The genes used as the seed members for this model are all either found in the gammproteobacterial context or the CydABCD context. All members of this family scoring above trusted at the time of its creation were from genomes which encode a cytochrome bd complex.
Probab=100.00 E-value=1.9e-33 Score=348.56 Aligned_cols=188 Identities=28% Similarity=0.444 Sum_probs=157.4
Q ss_pred cEEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCcc
Q 000808 676 HSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 755 (1275)
Q Consensus 676 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~ 755 (1275)
..++++|++|+|+ +++++|+|+|++++|||++||+||||||||||+|+|+|..++ .+|+|.+||.+
T Consensus 333 ~~I~~~~vsf~Y~------------~~~~vL~~isl~i~~G~~vaIvG~SGsGKSTLl~lL~g~~~p--~~G~I~i~g~~ 398 (529)
T TIGR02868 333 PTLELRDLSFGYP------------GSPPVLDGVSLDLPPGERVAILGPSGSGKSTLLMLLTGLLDP--LQGEVTLDGVS 398 (529)
T ss_pred ceEEEEEEEEecC------------CCCceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCcEEEECCEE
Confidence 4699999999984 123599999999999999999999999999999999998763 48999999987
Q ss_pred CC--cccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCcc-------ccccccCCC
Q 000808 756 KK--QETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPL-------RQSLVGLPG 826 (1275)
Q Consensus 756 ~~--~~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~-------~~~~~~~~~ 826 (1275)
++ ...+++.++||+|++.+++ -|++||+.++. + +.+ +++++++++..++.+. .|+.+|..+
T Consensus 399 i~~~~~~lr~~i~~V~Q~~~lF~-~TI~eNI~~g~----~-~~~----~e~i~~al~~a~l~~~i~~lp~GldT~ige~G 468 (529)
T TIGR02868 399 VSSLQDELRRRISVFAQDAHLFD-TTVRDNLRLGR----P-DAT----DEELWAALERVGLADWLRSLPDGLDTVLGEGG 468 (529)
T ss_pred hhhHHHHHHhheEEEccCccccc-ccHHHHHhccC----C-CCC----HHHHHHHHHHcCCHHHHHhCcccccchhcccc
Confidence 65 3456678999999999886 49999998752 1 222 2346777887777543 367777543
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCC
Q 000808 827 ESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQP 889 (1275)
Q Consensus 827 ~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~ 889 (1275)
.+||||||||++|||||+++|+||+||||||+||++++..+.+.++++. +++|+|+++|++
T Consensus 469 -~~LSGGQrQRiaiARall~~~~iliLDE~TSaLD~~te~~I~~~l~~~~-~~~TvIiItHrl 529 (529)
T TIGR02868 469 -ARLSGGERQRLALARALLADAPILLLDEPTEHLDAGTESELLEDLLAAL-SGKTVVVITHHL 529 (529)
T ss_pred -CcCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHhc-CCCEEEEEecCC
Confidence 5799999999999999999999999999999999999999999999864 479999999984
No 355
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=1.4e-33 Score=347.53 Aligned_cols=192 Identities=27% Similarity=0.416 Sum_probs=155.7
Q ss_pred EEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCcc---ccceEEEeccccccCCCCCHHHHHHHHHhccCCC
Q 000808 2 TLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV---PQRTAAYISQHDVHIGEMTVRETLAFSARCQGVG 78 (1275)
Q Consensus 2 ~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~~---~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~ 78 (1275)
+||+|+||||||||+|+|+|++.|. +|+|.+||.|+.+.+ .|+++|||+|++.+| +.|++||+.++..
T Consensus 502 vaIvG~SGsGKSTL~KLL~gly~p~---~G~I~~dg~dl~~i~~~~lR~~ig~V~Q~~~Lf-~gSI~eNi~l~~p----- 572 (709)
T COG2274 502 VAIVGRSGSGKSTLLKLLLGLYKPQ---QGRILLDGVDLNDIDLASLRRQVGYVLQDPFLF-SGSIRENIALGNP----- 572 (709)
T ss_pred EEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEeHHhcCHHHHHhheeEEcccchhh-cCcHHHHHhcCCC-----
Confidence 7999999999999999999999997 999999999987654 468999999987765 6799999998532
Q ss_pred CcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhhHHHH
Q 000808 79 SRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEM 158 (1275)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~a 158 (1275)
+.+.+..+++|....- ++ ....+|.+.+|.||+. +.+||||||||++||||
T Consensus 573 --------------------~~~~e~i~~A~~~ag~------~~--fI~~lP~gy~t~v~E~-G~~LSGGQrQrlalARa 623 (709)
T COG2274 573 --------------------EATDEEIIEAAQLAGA------HE--FIENLPMGYDTPVGEG-GANLSGGQRQRLALARA 623 (709)
T ss_pred --------------------CCCHHHHHHHHHHhCc------HH--HHHhcccccccccccC-CCCCCHHHHHHHHHHHH
Confidence 1122222333322111 11 1234899999999965 55899999999999999
Q ss_pred HhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhhHHH
Q 000808 159 MVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVLD 235 (1275)
Q Consensus 159 l~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~~~~ 235 (1275)
|+++|+||+||||||+||+.+...|.+.|.+..+ ++|+|+ ++|.. ...+.||||++|++|+++++|+++++.+
T Consensus 624 Ll~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~~--~~T~I~-IaHRl-~ti~~adrIiVl~~Gkiv~~gs~~ell~ 696 (709)
T COG2274 624 LLSKPKILLLDEATSALDPETEAIILQNLLQILQ--GRTVII-IAHRL-STIRSADRIIVLDQGKIVEQGSHEELLA 696 (709)
T ss_pred hccCCCEEEEeCcccccCHhHHHHHHHHHHHHhc--CCeEEE-EEccc-hHhhhccEEEEccCCceeccCCHHHHHH
Confidence 9999999999999999999999999999998642 456555 44433 5788999999999999999999999986
No 356
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=3.8e-33 Score=321.03 Aligned_cols=191 Identities=26% Similarity=0.353 Sum_probs=160.6
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCc--cccceEEEeccccccCCCCCHHHHHHHHHhccCCC
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEF--VPQRTAAYISQHDVHIGEMTVRETLAFSARCQGVG 78 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~--~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~ 78 (1275)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.+||++|++.+++.+||.||+.+.+.+.+..
T Consensus 69 i~gLlGpNGaGKSTLl~~L~Gl~~p~---~G~i~i~G~~~~~~~~~~~~~ig~v~q~~~~~~~~tv~e~l~~~~~~~~~~ 145 (340)
T PRK13536 69 CFGLLGPNGAGKSTIARMILGMTSPD---AGKITVLGVPVPARARLARARIGVVPQFDNLDLEFTVRENLLVFGRYFGMS 145 (340)
T ss_pred EEEEECCCCCCHHHHHHHHHcCCCCC---ceEEEECCEECCcchHHHhccEEEEeCCccCCCCCcHHHHHHHHHHHcCCC
Confidence 47999999999999999999999987 99999999987542 23567999999999999999999999765432210
Q ss_pred CcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhhHHHH
Q 000808 79 SRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEM 158 (1275)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~a 158 (1275)
. .+....++.+++.+||++..++.+ ++|||||||||+||+|
T Consensus 146 ----------~------------------------~~~~~~~~~ll~~~~L~~~~~~~~-----~~LS~G~kqrv~lA~a 186 (340)
T PRK13536 146 ----------T------------------------REIEAVIPSLLEFARLESKADARV-----SDLSGGMKRRLTLARA 186 (340)
T ss_pred ----------H------------------------HHHHHHHHHHHHHcCCchhhCCCh-----hhCCHHHHHHHHHHHH
Confidence 0 001112456788899987766555 4799999999999999
Q ss_pred HhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhhHHH
Q 000808 159 MVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVLD 235 (1275)
Q Consensus 159 l~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~~~~ 235 (1275)
|+++|++++|||||+|||+.++.++++.++++.+ . +.+|++++|+.+++.++||+|++|++|++++.|+++++.+
T Consensus 187 L~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~-~-g~tilisSH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~ 261 (340)
T PRK13536 187 LINDPQLLILDEPTTGLDPHARHLIWERLRSLLA-R-GKTILLTTHFMEEAERLCDRLCVLEAGRKIAEGRPHALID 261 (340)
T ss_pred HhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHh-C-CCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 9999999999999999999999999999999754 3 5567778999999999999999999999999999998864
No 357
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=3.7e-33 Score=322.77 Aligned_cols=195 Identities=25% Similarity=0.346 Sum_probs=161.2
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCccc-cceEEEeccccccCCCCCHHHHHHHHHhccCCCC
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFVP-QRTAAYISQHDVHIGEMTVRETLAFSARCQGVGS 79 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~~~-~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~ 79 (1275)
+++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++||+|++.+++.+||+||+.|+.+......
T Consensus 30 ~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~i~g~~i~~~~~~~r~i~~v~Q~~~l~p~~tv~eni~~~~~~~~~~~ 106 (353)
T PRK10851 30 MVALLGPSGSGKTTLLRIIAGLEHQT---SGHIRFHGTDVSRLHARDRKVGFVFQHYALFRHMTVFDNIAFGLTVLPRRE 106 (353)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHCCEEEEecCcccCCCCcHHHHHHhhhhhccccc
Confidence 47999999999999999999999987 9999999998754332 4679999999999999999999999754311000
Q ss_pred cchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhhHHHHH
Q 000808 80 RYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEMM 159 (1275)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~al 159 (1275)
... ..+....++++++.+||++..+ +.+..|||||||||+|||||
T Consensus 107 ~~~------------------------------~~~~~~~~~~~l~~~~L~~~~~-----~~~~~LSgGq~QRvalArAL 151 (353)
T PRK10851 107 RPN------------------------------AAAIKAKVTQLLEMVQLAHLAD-----RYPAQLSGGQKQRVALARAL 151 (353)
T ss_pred CCC------------------------------HHHHHHHHHHHHHHcCCchhhh-----CChhhCCHHHHHHHHHHHHH
Confidence 000 0011224567899999976554 45668999999999999999
Q ss_pred hcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhhHH
Q 000808 160 VGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVL 234 (1275)
Q Consensus 160 ~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~~~ 234 (1275)
+.+|++++|||||+|||+.++.++.+.|+++.+. .+.+++.++|+.+++..++|+|++|++|++++.|+++++.
T Consensus 152 ~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~-~g~tii~vTHd~~ea~~~~Dri~vl~~G~i~~~g~~~~i~ 225 (353)
T PRK10851 152 AVEPQILLLDEPFGALDAQVRKELRRWLRQLHEE-LKFTSVFVTHDQEEAMEVADRVVVMSQGNIEQAGTPDQVW 225 (353)
T ss_pred hcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 9999999999999999999999999999987653 3556667899999999999999999999999999998874
No 358
>TIGR03771 anch_rpt_ABC anchored repeat-type ABC transporter, ATP-binding subunit. This protein family is the ATP-binding cassette subunit of binding protein-dependent ABC transporter complex that strictly co-occurs with TIGR03769. TIGRFAMs model TIGR03769 describes a protein domain that occurs singly or as one of up to three repeats in proteins of a number of Actinobacteria, including Propionibacterium acnes KPA171202. The TIGR03769 domain occurs both in an adjacent gene for the substrate-binding protein and in additional (often nearby) proteins, often with LPXTG-like sortase recognition signals. Homologous ATP-binding subunits outside the scope of this family include manganese transporter MntA in Synechocystis sp. PCC 6803 and chelated iron transporter subunits. The function of this transporter complex is unknown.
Probab=100.00 E-value=5e-33 Score=304.12 Aligned_cols=194 Identities=24% Similarity=0.336 Sum_probs=159.5
Q ss_pred EEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCCcccccceEEEeccCCCCCC--CCCHHHHHHHHH
Q 000808 711 GAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQETFTRISGYCEQNDIHSP--FVTVYESLLYSA 788 (1275)
Q Consensus 711 ~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~~~~~~~~~~v~q~~~~~~--~ltv~e~l~~~~ 788 (1275)
+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... .++.++|++|++.+++ .+|+.|++.+..
T Consensus 1 l~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~--~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~ 76 (223)
T TIGR03771 1 LSADKGELLGLLGPNGAGKTTLLRAILGLIP--PAKGTVKVAGASPGK--GWRHIGYVPQRHEFAWDFPISVAHTVMSGR 76 (223)
T ss_pred CccCCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCccchH--hhCcEEEecccccccCCCCccHHHHHHhcc
Confidence 4689999999999999999999999999865 347999999987532 3456899999987643 479999998753
Q ss_pred hccCC-CCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHH
Q 000808 789 WLRLP-PEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAI 867 (1275)
Q Consensus 789 ~l~~~-~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~ 867 (1275)
..... ........+++++++++.+++.+..++.+ ..||||||||++|||+|+.+|++++|||||+|||+.++..
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llilDEP~~~LD~~~~~~ 151 (223)
T TIGR03771 77 TGHIGWLRRPCVADFAAVRDALRRVGLTELADRPV-----GELSGGQRQRVLVARALATRPSVLLLDEPFTGLDMPTQEL 151 (223)
T ss_pred ccccccccCCcHHHHHHHHHHHHHhCCchhhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHH
Confidence 21100 00111233456888999999987777665 4699999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcEEEEECCCC
Q 000808 868 VMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVGPLG 916 (1275)
Q Consensus 868 i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~~ 916 (1275)
+.+.|+++.++|+|||+++|+++ ++.+.+|+++++ + |++++.|+.+
T Consensus 152 l~~~l~~~~~~~~tvii~sH~~~-~~~~~~d~i~~l-~-G~i~~~~~~~ 197 (223)
T TIGR03771 152 LTELFIELAGAGTAILMTTHDLA-QAMATCDRVVLL-N-GRVIADGTPQ 197 (223)
T ss_pred HHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEE-C-CEEEeecCHH
Confidence 99999998777999999999976 577889999998 5 7999999874
No 359
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=100.00 E-value=3.9e-33 Score=349.56 Aligned_cols=211 Identities=26% Similarity=0.377 Sum_probs=174.8
Q ss_pred cEEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCcc
Q 000808 676 HSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 755 (1275)
Q Consensus 676 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~ 755 (1275)
..++++|++++++. ++++|+|+|++++|||+++|+|+||||||||+|+|+|..++ .+|+|.+||.+
T Consensus 333 ~~I~~~~vsf~y~~------------~~~iL~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~p--~~G~I~i~g~~ 398 (588)
T PRK13657 333 GAVEFDDVSFSYDN------------SRQGVEDVSFEAKPGQTVAIVGPTGAGKSTLINLLQRVFDP--QSGRILIDGTD 398 (588)
T ss_pred CeEEEEEEEEEeCC------------CCceecceeEEECCCCEEEEECCCCCCHHHHHHHHhcCcCC--CCCEEEECCEE
Confidence 46999999999841 23599999999999999999999999999999999998763 48999999988
Q ss_pred CCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCcc-------ccccccCC
Q 000808 756 KKQ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPL-------RQSLVGLP 825 (1275)
Q Consensus 756 ~~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~-------~~~~~~~~ 825 (1275)
... ..+++.++|++|++.+++ .|++||+.++. + +.++ +.++++++.+++.+. .|+.+|..
T Consensus 399 i~~~~~~~~r~~i~~v~Q~~~lf~-~Ti~~Ni~~~~----~-~~~d----~~i~~al~~~~l~~~i~~lp~gldt~i~~~ 468 (588)
T PRK13657 399 IRTVTRASLRRNIAVVFQDAGLFN-RSIEDNIRVGR----P-DATD----EEMRAAAERAQAHDFIERKPDGYDTVVGER 468 (588)
T ss_pred hhhCCHHHHHhheEEEecCccccc-ccHHHHHhcCC----C-CCCH----HHHHHHHHHhCHHHHHHhCcccccchhcCC
Confidence 653 356778999999998886 59999997641 1 2222 235566666665432 35556543
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeec
Q 000808 826 GESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKR 905 (1275)
Q Consensus 826 ~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~ 905 (1275)
.+.||||||||++|||||+++|+|++||||||+||+.++..+.+.|+++. +++|+|++||+++ ..+.+|++++|++
T Consensus 469 -g~~LSgGq~QRialARall~~~~iliLDEpts~LD~~t~~~i~~~l~~~~-~~~tvIiitHr~~--~~~~~D~ii~l~~ 544 (588)
T PRK13657 469 -GRQLSGGERQRLAIARALLKDPPILILDEATSALDVETEAKVKAALDELM-KGRTTFIIAHRLS--TVRNADRILVFDN 544 (588)
T ss_pred -CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHh-cCCEEEEEEecHH--HHHhCCEEEEEEC
Confidence 45799999999999999999999999999999999999999999998875 4799999999974 5688999999986
Q ss_pred CcEEEEECCC
Q 000808 906 GGQEIYVGPL 915 (1275)
Q Consensus 906 gg~~~~~g~~ 915 (1275)
|+++..|+.
T Consensus 545 -G~i~~~g~~ 553 (588)
T PRK13657 545 -GRVVESGSF 553 (588)
T ss_pred -CEEEEeCCH
Confidence 789988875
No 360
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.2e-33 Score=307.35 Aligned_cols=192 Identities=28% Similarity=0.374 Sum_probs=156.1
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCcc------ccceEEEeccccccCCCCCHHHHHHHHHhc
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV------PQRTAAYISQHDVHIGEMTVRETLAFSARC 74 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~~------~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~ 74 (1275)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+||+||+.++...
T Consensus 28 ~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~ 104 (235)
T cd03261 28 ILAIIGPSGSGKSTLLRLIVGLLRPD---SGEVLIDGEDISGLSEAELYRLRRRMGMLFQSGALFDSLTVFENVAFPLRE 104 (235)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccChhhHHHHhcceEEEccCcccCCCCcHHHHHHHHHhh
Confidence 47999999999999999999999987 999999998875422 245799999999899999999999986432
Q ss_pred cCCCCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhh
Q 000808 75 QGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVT 154 (1275)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvs 154 (1275)
.. . .. . ++....++++++.+||++..++ .++.|||||||||+
T Consensus 105 ~~-~--~~------~------------------------~~~~~~~~~~l~~~~l~~~~~~-----~~~~LSgG~~qrv~ 146 (235)
T cd03261 105 HT-R--LS------E------------------------EEIREIVLEKLEAVGLRGAEDL-----YPAELSGGMKKRVA 146 (235)
T ss_pred cc-C--CC------H------------------------HHHHHHHHHHHHHcCCchhhcC-----ChhhCCHHHHHHHH
Confidence 10 0 00 0 0011234567888999765543 45679999999999
Q ss_pred HHHHHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhhHH
Q 000808 155 TGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVL 234 (1275)
Q Consensus 155 iA~al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~~~ 234 (1275)
|||||+.+|++++|||||+|||+.++..+.+.+++..+.. +++|++++|+.+++..+||++++|++|++++.|+++++.
T Consensus 147 ia~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tvi~vsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 225 (235)
T cd03261 147 LARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKEL-GLTSIMVTHDLDTAFAIADRIAVLYDGKIVAEGTPEELR 225 (235)
T ss_pred HHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhc-CcEEEEEecCHHHHHHhcCEEEEEECCeEEEecCHHHHc
Confidence 9999999999999999999999999999999999875432 455666888888999999999999999999999887653
No 361
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=2.3e-33 Score=357.76 Aligned_cols=214 Identities=26% Similarity=0.411 Sum_probs=176.6
Q ss_pred CcEEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCc
Q 000808 675 PHSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGY 754 (1275)
Q Consensus 675 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~ 754 (1275)
...++++|++++|+. +++.+|+|+|++++|||++||+|+||||||||+|+|+|..++ .+|+|.+||.
T Consensus 453 ~~~i~~~~vsf~y~~-----------~~~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~p--~~G~I~idg~ 519 (694)
T TIGR01846 453 RGAITFENIRFRYAP-----------DSPEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTP--QHGQVLVDGV 519 (694)
T ss_pred CCeEEEEEEEEEcCC-----------CCccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECCE
Confidence 357999999999841 234699999999999999999999999999999999998763 4799999999
Q ss_pred cCCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCcc-------ccccccC
Q 000808 755 PKKQ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPL-------RQSLVGL 824 (1275)
Q Consensus 755 ~~~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~-------~~~~~~~ 824 (1275)
+++. ..+++.++||+|++.+++ .|++||+.++. + +.+. +.+.++++..++.+. .|+.+|.
T Consensus 520 ~i~~~~~~~~r~~i~~v~q~~~lf~-~ti~eNi~~~~----~-~~~~----~~i~~a~~~~~l~~~i~~lp~gl~t~i~~ 589 (694)
T TIGR01846 520 DLAIADPAWLRRQMGVVLQENVLFS-RSIRDNIALCN----P-GAPF----EHVIHAAKLAGAHDFISELPQGYNTEVGE 589 (694)
T ss_pred ehhhCCHHHHHHhCeEEccCCeehh-hhHHHHHhcCC----C-CCCH----HHHHHHHHHcChHHHHHhCcCccCcEecC
Confidence 8653 356778999999998886 59999997631 1 2222 235566666665432 3566665
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheee
Q 000808 825 PGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMK 904 (1275)
Q Consensus 825 ~~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~ 904 (1275)
. ..+||||||||++|||||+++|++|+||||||+||+.++..+.+.|+++. +++|+|+++|+++ ....+|++++|+
T Consensus 590 ~-g~~LSgGq~qri~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~-~~~t~i~itH~~~--~~~~~d~ii~l~ 665 (694)
T TIGR01846 590 K-GANLSGGQRQRIAIARALVGNPRILIFDEATSALDYESEALIMRNMREIC-RGRTVIIIAHRLS--TVRACDRIIVLE 665 (694)
T ss_pred C-CCCCCHHHHHHHHHHHHHHhCCCEEEEECCCcCCCHHHHHHHHHHHHHHh-CCCEEEEEeCChH--HHHhCCEEEEEe
Confidence 4 46899999999999999999999999999999999999999999999875 5899999999985 456799999998
Q ss_pred cCcEEEEECCCC
Q 000808 905 RGGQEIYVGPLG 916 (1275)
Q Consensus 905 ~gg~~~~~g~~~ 916 (1275)
+ |+++..|+.+
T Consensus 666 ~-G~i~~~g~~~ 676 (694)
T TIGR01846 666 K-GQIAESGRHE 676 (694)
T ss_pred C-CEEEEeCCHH
Confidence 6 7999999863
No 362
>cd03223 ABCD_peroxisomal_ALDP Peroxisomal ATP-binding cassette transporter (Pat) is involved in the import of very long-chain fatty acids (VLCFA) into the peroxisome. The peroxisomal membrane forms a permeability barrier for a wide variety of metabolites required for and formed during fatty acid beta-oxidation. To communicate with the cytoplasm and mitochondria, peroxisomes need dedicated proteins to transport such hydrophilic molecules across their membranes. X-linked adrenoleukodystrophy (X-ALD) is caused by mutations in the ALD gene, which encodes ALDP (adrenoleukodystrophy protein ), a peroxisomal integral membrane protein that is a member of the ATP-binding cassette (ABC) transporter protein family. The disease is characterized by a striking and unpredictable variation in phenotypic expression. Phenotypes include the rapidly progressive childhood cerebral form (CCALD), the milder adult form, adrenomyeloneuropathy (AMN), and variants without neurologic involvement (i.e. asympt
Probab=100.00 E-value=1.1e-32 Score=286.44 Aligned_cols=164 Identities=27% Similarity=0.424 Sum_probs=141.3
Q ss_pred EEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCCc
Q 000808 679 TFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 758 (1275)
Q Consensus 679 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 758 (1275)
+++|+++.++ +++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.
T Consensus 2 ~~~~~~~~~~------------~~~~~l~~i~l~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~~~---- 63 (166)
T cd03223 2 ELENLSLATP------------DGRVLLKDLSFEIKPGDRLLITGPSGTGKSSLFRALAGLWP--WGSGRIGMPEG---- 63 (166)
T ss_pred EEEEEEEEcC------------CCCeeeecCeEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCC----
Confidence 5778887763 12459999999999999999999999999999999999865 34799999873
Q ss_pred ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHH
Q 000808 759 ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKRL 838 (1275)
Q Consensus 759 ~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv 838 (1275)
+.++|++|++.++ ..|++||+.+. . ...||||||||+
T Consensus 64 ----~~i~~~~q~~~~~-~~tv~~nl~~~---------------------------------~-----~~~LS~G~~~rv 100 (166)
T cd03223 64 ----EDLLFLPQRPYLP-LGTLREQLIYP---------------------------------W-----DDVLSGGEQQRL 100 (166)
T ss_pred ----ceEEEECCCCccc-cccHHHHhhcc---------------------------------C-----CCCCCHHHHHHH
Confidence 5689999998764 57999998642 0 146999999999
Q ss_pred HHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcE
Q 000808 839 TIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQ 908 (1275)
Q Consensus 839 ~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~ 908 (1275)
+|||+|+.+|++++|||||+|||+.++..+.+.++++ ++|+|+++|+++ ....+|++++|+++|.
T Consensus 101 ~laral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~---~~tiiivsh~~~--~~~~~d~i~~l~~~~~ 165 (166)
T cd03223 101 AFARLLLHKPKFVFLDEATSALDEESEDRLYQLLKEL---GITVISVGHRPS--LWKFHDRVLDLDGEGG 165 (166)
T ss_pred HHHHHHHcCCCEEEEECCccccCHHHHHHHHHHHHHh---CCEEEEEeCChh--HHhhCCEEEEEcCCCC
Confidence 9999999999999999999999999999999999876 589999999975 4578999999998774
No 363
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.7e-33 Score=324.03 Aligned_cols=191 Identities=25% Similarity=0.374 Sum_probs=159.4
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCcc-ccceEEEeccccccCCCCCHHHHHHHHHhccCCCC
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV-PQRTAAYISQHDVHIGEMTVRETLAFSARCQGVGS 79 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~~-~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~ 79 (1275)
+++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.+||+||+.|+.+.++..
T Consensus 31 ~~~l~G~nGsGKSTLL~~iaGl~~p~---~G~I~~~g~~i~~~~~~~~~i~~v~Q~~~l~~~~tv~eni~~~~~~~~~~- 106 (369)
T PRK11000 31 FVVFVGPSGCGKSTLLRMIAGLEDIT---SGDLFIGEKRMNDVPPAERGVGMVFQSYALYPHLSVAENMSFGLKLAGAK- 106 (369)
T ss_pred EEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHhHCCEEEEeCCcccCCCCCHHHHHHhHHhhcCCC-
Confidence 47999999999999999999999987 999999999875432 2467999999999999999999999976432210
Q ss_pred cchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhhHHHHH
Q 000808 80 RYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEMM 159 (1275)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~al 159 (1275)
. .+....++++++.+||++..+ +.+.+|||||||||+|||||
T Consensus 107 ---------~------------------------~~~~~~~~~~l~~lgL~~~~~-----~~~~~LSgGq~QRvaLAraL 148 (369)
T PRK11000 107 ---------K------------------------EEINQRVNQVAEVLQLAHLLD-----RKPKALSGGQRQRVAIGRTL 148 (369)
T ss_pred ---------H------------------------HHHHHHHHHHHHHcCChhhhc-----CChhhCCHHHHHHHHHHHHH
Confidence 0 011123567889999976554 44567999999999999999
Q ss_pred hcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhhHH
Q 000808 160 VGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVL 234 (1275)
Q Consensus 160 ~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~~~ 234 (1275)
+.+|++|||||||+|||+.++.++.+.|+++.+.. +++++.++|+.+++..++|+|++|++|+++..|+++++.
T Consensus 149 ~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~-g~tvI~vTHd~~~~~~~~d~i~vl~~G~i~~~g~~~~i~ 222 (369)
T PRK11000 149 VAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRL-GRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELY 222 (369)
T ss_pred hcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHh-CCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 99999999999999999999999999999876533 455666888889999999999999999999999988874
No 364
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=5.9e-33 Score=310.47 Aligned_cols=212 Identities=23% Similarity=0.303 Sum_probs=165.2
Q ss_pred cEEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCcc
Q 000808 676 HSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 755 (1275)
Q Consensus 676 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~ 755 (1275)
..++++|++++++. .++.+|+|+|++++|||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+
T Consensus 18 ~~i~~~~l~~~~~~-----------~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~i~g~~ 84 (257)
T cd03288 18 GEIKIHDLCVRYEN-----------NLKPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVD--IFDGKIVIDGID 84 (257)
T ss_pred ceEEEEEEEEEeCC-----------CCCcceeEEEEEEcCCCEEEEECCCCCCHHHHHHHHHcccC--CCCCeEEECCEE
Confidence 46999999988741 12459999999999999999999999999999999999865 358999999987
Q ss_pred CCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCcccccc-------ccCC
Q 000808 756 KKQ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSL-------VGLP 825 (1275)
Q Consensus 756 ~~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~-------~~~~ 825 (1275)
... ..+++.++|++|++.+++ .|++||+.... .... +.++++++..++.+..+.. .+ .
T Consensus 85 i~~~~~~~~~~~i~~v~q~~~l~~-~tv~~nl~~~~------~~~~----~~~~~~l~~~~l~~~~~~~~~~l~~~~~-~ 152 (257)
T cd03288 85 ISKLPLHTLRSRLSIILQDPILFS-GSIRFNLDPEC------KCTD----DRLWEALEIAQLKNMVKSLPGGLDAVVT-E 152 (257)
T ss_pred hhhCCHHHHhhhEEEECCCCcccc-cHHHHhcCcCC------CCCH----HHHHHHHHHhCcHHHHhhcccccCcEec-c
Confidence 643 234567899999998776 59999884311 1111 1233344444443322221 11 1
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeec
Q 000808 826 GESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKR 905 (1275)
Q Consensus 826 ~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~ 905 (1275)
....||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.++++. +++|||+++|+++. +. .+|++++|++
T Consensus 153 ~~~~LS~G~~qrl~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~~~-~~~tiii~sh~~~~-~~-~~dri~~l~~ 229 (257)
T cd03288 153 GGENFSVGQRQLFCLARAFVRKSSILIMDEATASIDMATENILQKVVMTAF-ADRTVVTIAHRVST-IL-DADLVLVLSR 229 (257)
T ss_pred CCCcCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHhc-CCCEEEEEecChHH-HH-hCCEEEEEEC
Confidence 235799999999999999999999999999999999999999999999874 48999999999863 44 5999999986
Q ss_pred CcEEEEECCCC
Q 000808 906 GGQEIYVGPLG 916 (1275)
Q Consensus 906 gg~~~~~g~~~ 916 (1275)
|+++..|+++
T Consensus 230 -G~i~~~g~~~ 239 (257)
T cd03288 230 -GILVECDTPE 239 (257)
T ss_pred -CEEEEeCCHH
Confidence 7999998863
No 365
>cd03214 ABC_Iron-Siderophores_B12_Hemin ABC transporters, involved in the uptake of siderophores, heme, and vitamin B12, are widely conserved in bacteria and archaea. Only very few species lack representatives of the siderophore family transporters. The E. coli BtuCD protein is an ABC transporter mediating vitamin B12 uptake. The two ATP-binding cassettes (BtuD) are in close contact with each other, as are the two membrane-spanning subunits (BtuC); this arrangement is distinct from that observed for the E. coli lipid flippase MsbA. The BtuC subunits provide 20 transmembrane helices grouped around a translocation pathway that is closed to the cytoplasm by a gate region, whereas the dimer arrangement of the BtuD subunits resembles the ATP-bound form of the Rad50 DNA repair enzyme. A prominent cytoplasmic loop of BtuC forms the contact region with the ATP-binding cassette and represent a conserved motif among the ABC transporters.
Probab=100.00 E-value=3.6e-33 Score=294.73 Aligned_cols=175 Identities=28% Similarity=0.443 Sum_probs=144.3
Q ss_pred EEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCCc-
Q 000808 680 FDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ- 758 (1275)
Q Consensus 680 ~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~- 758 (1275)
++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~l~~~~~-------------~~~~l~~~~~~i~~G~~~~l~G~nGsGKStLl~~i~G~~~--~~~G~v~~~g~~~~~~ 66 (180)
T cd03214 2 VENLSVGYG-------------GRTVLDDLSLSIEAGEIVGILGPNGAGKSTLLKTLAGLLK--PSSGEILLDGKDLASL 66 (180)
T ss_pred eeEEEEEEC-------------CeeeEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEECCcC
Confidence 567777663 2359999999999999999999999999999999999865 348999999987542
Q ss_pred --ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHH
Q 000808 759 --ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRK 836 (1275)
Q Consensus 759 --~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerq 836 (1275)
..+++.++|++| +++.+|+.+..++.+ +.|||||||
T Consensus 67 ~~~~~~~~i~~~~q-------------------------------------~l~~~gl~~~~~~~~-----~~LS~G~~q 104 (180)
T cd03214 67 SPKELARKIAYVPQ-------------------------------------ALELLGLAHLADRPF-----NELSGGERQ 104 (180)
T ss_pred CHHHHHHHHhHHHH-------------------------------------HHHHcCCHhHhcCCc-----ccCCHHHHH
Confidence 112334566666 556667765555443 469999999
Q ss_pred HHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhhhhheeecCcEEEEEC
Q 000808 837 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVG 913 (1275)
Q Consensus 837 rv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g 913 (1275)
|++|||+|+.+|++++|||||+|||+.++..+.+.|++++++ |+|+|+++|+++ ++.+.+|++++|.+ |++++.|
T Consensus 105 rl~laral~~~p~llllDEP~~~LD~~~~~~~~~~l~~~~~~~~~tiii~sh~~~-~~~~~~d~~~~l~~-g~i~~~~ 180 (180)
T cd03214 105 RVLLARALAQEPPILLLDEPTSHLDIAHQIELLELLRRLARERGKTVVMVLHDLN-LAARYADRVILLKD-GRIVAQG 180 (180)
T ss_pred HHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEecC
Confidence 999999999999999999999999999999999999998766 899999999986 56688999999986 6777653
No 366
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1). NFT1 belongs to the MRP (mulrtidrug resisitance-associated protein) family of ABC transporters. Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=1.6e-32 Score=297.33 Aligned_cols=200 Identities=23% Similarity=0.273 Sum_probs=159.9
Q ss_pred cEEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCcc
Q 000808 676 HSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 755 (1275)
Q Consensus 676 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~ 755 (1275)
..++++|+++.++. ..+.+++|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+
T Consensus 5 ~~l~~~~l~~~~~~-----------~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~ 71 (207)
T cd03369 5 GEIEVENLSVRYAP-----------DLPPVLKNVSFKVKAGEKIGIVGRTGAGKSTLILALFRFLEA--EEGKIEIDGID 71 (207)
T ss_pred CeEEEEEEEEEeCC-----------CCcccccCceEEECCCCEEEEECCCCCCHHHHHHHHhcccCC--CCCeEEECCEE
Confidence 35889999987641 123599999999999999999999999999999999998653 47999999987
Q ss_pred CCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCH
Q 000808 756 KKQ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLST 832 (1275)
Q Consensus 756 ~~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSg 832 (1275)
... ...++.++|++|++.+++ .|++||+.+.. .... +.+.+.++ + +.. ...|||
T Consensus 72 ~~~~~~~~~~~~i~~v~q~~~~~~-~tv~~~l~~~~------~~~~----~~~~~~l~---~----~~~-----~~~LS~ 128 (207)
T cd03369 72 ISTIPLEDLRSSLTIIPQDPTLFS-GTIRSNLDPFD------EYSD----EEIYGALR---V----SEG-----GLNLSQ 128 (207)
T ss_pred hHHCCHHHHHhhEEEEecCCcccC-ccHHHHhcccC------CCCH----HHHHHHhh---c----cCC-----CCcCCH
Confidence 532 223567999999998776 59999996421 1111 11333333 2 222 357999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcEEEEE
Q 000808 833 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYV 912 (1275)
Q Consensus 833 Gerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~ 912 (1275)
|||||++|||+|+.+|++++|||||+|||+.+...+.+.|+++. +|+|+|+++|+++. + ..+|++++|++ |+++..
T Consensus 129 G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~-~~~tiii~th~~~~-~-~~~d~v~~l~~-g~i~~~ 204 (207)
T cd03369 129 GQRQLLCLARALLKRPRVLVLDEATASIDYATDALIQKTIREEF-TNSTILTIAHRLRT-I-IDYDKILVMDA-GEVKEY 204 (207)
T ss_pred HHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHhc-CCCEEEEEeCCHHH-H-hhCCEEEEEEC-CEEEec
Confidence 99999999999999999999999999999999999999999985 48999999999863 4 45899999996 788887
Q ss_pred CCC
Q 000808 913 GPL 915 (1275)
Q Consensus 913 g~~ 915 (1275)
|++
T Consensus 205 g~~ 207 (207)
T cd03369 205 DHP 207 (207)
T ss_pred CCC
Confidence 753
No 367
>PRK13541 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=2.2e-32 Score=292.89 Aligned_cols=191 Identities=20% Similarity=0.289 Sum_probs=156.1
Q ss_pred EEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCC
Q 000808 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1275)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 757 (1275)
++++|+++++. ++.+++ +|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~l~~-vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~i~ 65 (195)
T PRK13541 2 LSLHQLQFNIE-------------QKNLFD-LSITFLPSAITYIKGANGCGKSSLLRMIAGIMQ--PSSGNIYYKNCNIN 65 (195)
T ss_pred eEEEEeeEEEC-------------CcEEEE-EEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCcccC
Confidence 56788888763 123555 999999999999999999999999999999865 34899999998764
Q ss_pred cccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHH
Q 000808 758 QETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKR 837 (1275)
Q Consensus 758 ~~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqr 837 (1275)
... ++.++|++|++.+++..|++||+.+..... . .+++++++++.+++.+..++.+ +.||||||||
T Consensus 66 ~~~-~~~~~~~~~~~~~~~~~tv~~~l~~~~~~~---~-----~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~~r 131 (195)
T PRK13541 66 NIA-KPYCTYIGHNLGLKLEMTVFENLKFWSEIY---N-----SAETLYAAIHYFKLHDLLDEKC-----YSLSSGMQKI 131 (195)
T ss_pred hhh-hhhEEeccCCcCCCccCCHHHHHHHHHHhc---c-----cHHHHHHHHHHcCCHhhhccCh-----hhCCHHHHHH
Confidence 322 345799999988888899999998754322 1 1235678889999987766654 4699999999
Q ss_pred HHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhh
Q 000808 838 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEL 900 (1275)
Q Consensus 838 v~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~ 900 (1275)
++|||+|+.+|++++|||||+|||+.++..+.+.|++..++|+|||+++|+++ ....+|-+
T Consensus 132 l~la~al~~~p~~lllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~--~i~~~~~~ 192 (195)
T PRK13541 132 VAIARLIACQSDLWLLDEVETNLSKENRDLLNNLIVMKANSGGIVLLSSHLES--SIKSAQIL 192 (195)
T ss_pred HHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCcc--ccchhhee
Confidence 99999999999999999999999999999999999876667899999999976 33444543
No 368
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=4.4e-33 Score=349.39 Aligned_cols=213 Identities=25% Similarity=0.363 Sum_probs=176.8
Q ss_pred cEEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCcc
Q 000808 676 HSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 755 (1275)
Q Consensus 676 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~ 755 (1275)
..++++|++++++. .++++|+|+|+++++||+++|+|+||||||||+++|+|..++ .+|+|.+||.+
T Consensus 329 ~~i~~~~v~f~y~~-----------~~~~il~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~~--~~G~I~i~g~~ 395 (571)
T TIGR02203 329 GDVEFRNVTFRYPG-----------RDRPALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEP--DSGQILLDGHD 395 (571)
T ss_pred CeEEEEEEEEEcCC-----------CCCccccCeeEEecCCCEEEEECCCCCCHHHHHHHHHhccCC--CCCeEEECCEe
Confidence 46999999999841 124699999999999999999999999999999999998763 47999999987
Q ss_pred CCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCcc-------ccccccCC
Q 000808 756 KKQ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPL-------RQSLVGLP 825 (1275)
Q Consensus 756 ~~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~-------~~~~~~~~ 825 (1275)
.+. ..+++.++|++|++.+++ .|++||+.++. +.+.+ +++++++++.+|+.+. .|+.+|..
T Consensus 396 i~~~~~~~~~~~i~~v~Q~~~lf~-~Ti~~Ni~~~~----~~~~~----~~~i~~~l~~~~l~~~i~~lp~gldt~i~~~ 466 (571)
T TIGR02203 396 LADYTLASLRRQVALVSQDVVLFN-DTIANNIAYGR----TEQAD----RAEIERALAAAYAQDFVDKLPLGLDTPIGEN 466 (571)
T ss_pred HHhcCHHHHHhhceEEccCccccc-ccHHHHHhcCC----CCCCC----HHHHHHHHHHcChHHHHHhCcCcccceecCC
Confidence 643 346678999999998875 59999997642 11222 2346777888777543 35556644
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeec
Q 000808 826 GESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKR 905 (1275)
Q Consensus 826 ~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~ 905 (1275)
.+.||||||||++|||+++++|+|++||||||+||+.++..+.+.|++.. +++|+|++||+++ ..+.+|++++|++
T Consensus 467 -g~~LSgGqrQRiaLARall~~~~illLDEpts~LD~~~~~~i~~~L~~~~-~~~tiIiitH~~~--~~~~~D~ii~l~~ 542 (571)
T TIGR02203 467 -GVLLSGGQRQRLAIARALLKDAPILILDEATSALDNESERLVQAALERLM-QGRTTLVIAHRLS--TIEKADRIVVMDD 542 (571)
T ss_pred -CCcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHh-CCCEEEEEehhhH--HHHhCCEEEEEeC
Confidence 45799999999999999999999999999999999999999999999875 4799999999974 6788999999985
Q ss_pred CcEEEEECCC
Q 000808 906 GGQEIYVGPL 915 (1275)
Q Consensus 906 gg~~~~~g~~ 915 (1275)
|+++..|+.
T Consensus 543 -g~i~~~g~~ 551 (571)
T TIGR02203 543 -GRIVERGTH 551 (571)
T ss_pred -CEEEeeCCH
Confidence 799988875
No 369
>COG4619 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=1.2e-33 Score=271.89 Aligned_cols=191 Identities=22% Similarity=0.339 Sum_probs=163.2
Q ss_pred cccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCCc---ccccceEEEeccCCCCCCC
Q 000808 701 DKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ---ETFTRISGYCEQNDIHSPF 777 (1275)
Q Consensus 701 ~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~---~~~~~~~~~v~q~~~~~~~ 777 (1275)
...++|+++|+++++||..+|.||||||||||+|+++...+ +.+|.+++.|.+.+. ..+|.+++||.|.+.+|+.
T Consensus 14 ~~a~il~~isl~v~~Ge~iaitGPSG~GKStllk~va~Lis--p~~G~l~f~Ge~vs~~~pea~Rq~VsY~~Q~paLfg~ 91 (223)
T COG4619 14 GDAKILNNISLSVRAGEFIAITGPSGCGKSTLLKIVASLIS--PTSGTLLFEGEDVSTLKPEAYRQQVSYCAQTPALFGD 91 (223)
T ss_pred CCCeeecceeeeecCCceEEEeCCCCccHHHHHHHHHhccC--CCCceEEEcCccccccChHHHHHHHHHHHcCcccccc
Confidence 34579999999999999999999999999999999999876 458999999998753 4678889999999999985
Q ss_pred CCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccc-cccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCC
Q 000808 778 VTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLR-QSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEP 856 (1275)
Q Consensus 778 ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~-~~~~~~~~~~~lSgGerqrv~ia~~l~~~p~illlDEP 856 (1275)
||++|+.|...+|-.. .+ .....+.++.+++.+.. ++.+ ..||||||||++|+|-|..-|+||+||||
T Consensus 92 -tVeDNlifP~~~r~rr-~d----r~aa~~llar~~l~~~~L~k~i-----t~lSGGE~QriAliR~Lq~~P~ILLLDE~ 160 (223)
T COG4619 92 -TVEDNLIFPWQIRNRR-PD----RAAALDLLARFALPDSILTKNI-----TELSGGEKQRIALIRNLQFMPKILLLDEI 160 (223)
T ss_pred -chhhccccchHHhccC-CC----hHHHHHHHHHcCCchhhhcchh-----hhccchHHHHHHHHHHhhcCCceEEecCc
Confidence 9999999988776322 22 23456788888886543 2322 47999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHh-hCCCEEEEEecCCCHHHHHhhhhhheeec
Q 000808 857 TSGLDARAAAIVMRTVRNTV-DTGRTVVCTIHQPSIDIFESFDELFLMKR 905 (1275)
Q Consensus 857 tsgLD~~~~~~i~~~l~~~~-~~g~tvi~~~H~~~~~~~~~~d~~~~l~~ 905 (1275)
||+||+.+++.|-++|.++. .+.+.++-+||++. +....+|+++-+..
T Consensus 161 TsALD~~nkr~ie~mi~~~v~~q~vAv~WiTHd~d-qa~rha~k~itl~~ 209 (223)
T COG4619 161 TSALDESNKRNIEEMIHRYVREQNVAVLWITHDKD-QAIRHADKVITLQP 209 (223)
T ss_pred hhhcChhhHHHHHHHHHHHhhhhceEEEEEecChH-HHhhhhheEEEecc
Confidence 99999999999999999987 56899999999986 56788999998886
No 370
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=8.5e-33 Score=338.87 Aligned_cols=206 Identities=18% Similarity=0.199 Sum_probs=171.6
Q ss_pred EEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCC
Q 000808 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1275)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 757 (1275)
++++|++++++ ++.+|+|+|+++++||+++|+||||||||||+|+|+|..+ +.+|+|.++|.+..
T Consensus 4 l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~liG~nGsGKSTLl~~l~G~~~--p~~G~i~~~~~~~~ 68 (490)
T PRK10938 4 LQISQGTFRLS-------------DTKTLQLPSLTLNAGDSWAFVGANGSGKSALARALAGELP--LLSGERQSQFSHIT 68 (490)
T ss_pred EEEEeEEEEcC-------------CeeecccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCC--CCCceEEECCcccc
Confidence 77899998873 2359999999999999999999999999999999999865 34799999887643
Q ss_pred c---ccccceEEEeccCCCC--C------CCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCC
Q 000808 758 Q---ETFTRISGYCEQNDIH--S------PFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPG 826 (1275)
Q Consensus 758 ~---~~~~~~~~~v~q~~~~--~------~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~ 826 (1275)
. ...++.++|++|++.. + ..+|++|++.+. .+.+++++++++.+|+.+..+..+
T Consensus 69 ~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~l~~~~l~~~~~~~~---- 133 (490)
T PRK10938 69 RLSFEQLQKLVSDEWQRNNTDMLSPGEDDTGRTTAEIIQDE-----------VKDPARCEQLAQQFGITALLDRRF---- 133 (490)
T ss_pred cCCHHHHHHHhceeccCcchhhcccchhhccccHHHhcccc-----------hhHHHHHHHHHHHcCCHhhhhCCc----
Confidence 2 1233458999998643 1 146888876431 122456789999999988777776
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecC
Q 000808 827 ESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRG 906 (1275)
Q Consensus 827 ~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~g 906 (1275)
..|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|+++ .+.+.+|++++|++
T Consensus 134 -~~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tvii~tH~~~-~~~~~~d~v~~l~~- 210 (490)
T PRK10938 134 -KYLSTGETRKTLLCQALMSEPDLLILDEPFDGLDVASRQQLAELLASLHQSGITLVLVLNRFD-EIPDFVQFAGVLAD- 210 (490)
T ss_pred -ccCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCeEEEEeCCHH-HHHhhCCEEEEEEC-
Confidence 469999999999999999999999999999999999999999999999877999999999986 56788999999986
Q ss_pred cEEEEECCCC
Q 000808 907 GQEIYVGPLG 916 (1275)
Q Consensus 907 g~~~~~g~~~ 916 (1275)
|+++..|+++
T Consensus 211 G~i~~~~~~~ 220 (490)
T PRK10938 211 CTLAETGERE 220 (490)
T ss_pred CEEEEeCCHH
Confidence 7899998764
No 371
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=7.6e-33 Score=344.59 Aligned_cols=212 Identities=22% Similarity=0.346 Sum_probs=174.1
Q ss_pred cEEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCcc
Q 000808 676 HSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 755 (1275)
Q Consensus 676 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~ 755 (1275)
..++++|++++++. +++.+|+|+|++++|||+++|+||||||||||+++|+|..+ +.+|+|.+||.+
T Consensus 312 ~~I~~~~v~~~y~~-----------~~~~~l~~i~~~i~~G~~~~ivG~sGsGKSTLl~ll~g~~~--p~~G~i~~~g~~ 378 (569)
T PRK10789 312 GELDVNIRQFTYPQ-----------TDHPALENVNFTLKPGQMLGICGPTGSGKSTLLSLIQRHFD--VSEGDIRFHDIP 378 (569)
T ss_pred CcEEEEEEEEECCC-----------CCCccccCeeEEECCCCEEEEECCCCCCHHHHHHHHhcccC--CCCCEEEECCEE
Confidence 46899999998741 12469999999999999999999999999999999999876 348999999987
Q ss_pred CCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCc-------cccccccCC
Q 000808 756 KKQ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNP-------LRQSLVGLP 825 (1275)
Q Consensus 756 ~~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~-------~~~~~~~~~ 825 (1275)
... ..+++.++|++|++.+++ .|++||+.++. + +.+. +.++++++..++.+ -.|+.+|..
T Consensus 379 ~~~~~~~~~~~~i~~v~q~~~lf~-~ti~~Ni~~~~----~-~~~~----~~~~~~~~~~~l~~~i~~lp~gl~t~~~~~ 448 (569)
T PRK10789 379 LTKLQLDSWRSRLAVVSQTPFLFS-DTVANNIALGR----P-DATQ----QEIEHVARLASVHDDILRLPQGYDTEVGER 448 (569)
T ss_pred HhhCCHHHHHhheEEEccCCeecc-ccHHHHHhcCC----C-CCCH----HHHHHHHHHcCCHHHHHhCcCcccceecCC
Confidence 643 345678999999998886 49999997642 1 2222 23456666666543 235556543
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeec
Q 000808 826 GESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKR 905 (1275)
Q Consensus 826 ~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~ 905 (1275)
..+||||||||++|||||+++|++++||||||+||+.++..+.+.|+++. +|+|+|+++|+++ ..+.+|++++|++
T Consensus 449 -g~~LSgGq~qRi~lARall~~~~illlDEpts~LD~~~~~~i~~~l~~~~-~~~tii~itH~~~--~~~~~d~i~~l~~ 524 (569)
T PRK10789 449 -GVMLSGGQKQRISIARALLLNAEILILDDALSAVDGRTEHQILHNLRQWG-EGRTVIISAHRLS--ALTEASEILVMQH 524 (569)
T ss_pred -CCcCCHHHHHHHHHHHHHhcCCCEEEEECccccCCHHHHHHHHHHHHHHh-CCCEEEEEecchh--HHHcCCEEEEEeC
Confidence 35799999999999999999999999999999999999999999999875 5899999999985 4577999999986
Q ss_pred CcEEEEECCC
Q 000808 906 GGQEIYVGPL 915 (1275)
Q Consensus 906 gg~~~~~g~~ 915 (1275)
|+++..|+.
T Consensus 525 -G~i~~~g~~ 533 (569)
T PRK10789 525 -GHIAQRGNH 533 (569)
T ss_pred -CEEEEecCH
Confidence 799999986
No 372
>COG4148 ModC ABC-type molybdate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.9e-33 Score=292.35 Aligned_cols=191 Identities=24% Similarity=0.399 Sum_probs=165.9
Q ss_pred ceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCC---c----ccccceEEEeccCCCCCCCCCH
Q 000808 708 GVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK---Q----ETFTRISGYCEQNDIHSPFVTV 780 (1275)
Q Consensus 708 ~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~---~----~~~~~~~~~v~q~~~~~~~ltv 780 (1275)
++++..+.-.++||-|+||||||||+|+|+|...+ .+|.|.+||.-.. + ...+|.+|||+||-.+||++||
T Consensus 16 ~a~~~~p~~GvTAlFG~SGsGKTslin~IaGL~rP--deG~I~lngr~L~Ds~k~i~lp~~~RriGYVFQDARLFpH~tV 93 (352)
T COG4148 16 DANFTLPARGITALFGPSGSGKTSLINMIAGLTRP--DEGRIELNGRVLVDAEKGIFLPPEKRRIGYVFQDARLFPHYTV 93 (352)
T ss_pred EEeccCCCCceEEEecCCCCChhhHHHHHhccCCc--cccEEEECCEEeecccCCcccChhhheeeeEeeccccccceEE
Confidence 56777777579999999999999999999998763 4789999986431 1 1346789999999999999999
Q ss_pred HHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCC
Q 000808 781 YESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 860 (1275)
Q Consensus 781 ~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgL 860 (1275)
+.||.|+.+.. .....+++.+.||+.|..++.. ..|||||||||+|+|||++.|++|+||||.++|
T Consensus 94 rgNL~YG~~~~---------~~~~fd~iv~lLGI~hLL~R~P-----~~LSGGEkQRVAIGRALLt~P~LLLmDEPLaSL 159 (352)
T COG4148 94 RGNLRYGMWKS---------MRAQFDQLVALLGIEHLLDRYP-----GTLSGGEKQRVAIGRALLTAPELLLMDEPLASL 159 (352)
T ss_pred ecchhhhhccc---------chHhHHHHHHHhCcHHHHhhCC-----CccCcchhhHHHHHHHHhcCCCeeeecCchhhc
Confidence 99999985422 2234688999999999999885 469999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhhhhheeecCcEEEEECCCC
Q 000808 861 DARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVGPLG 916 (1275)
Q Consensus 861 D~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~~ 916 (1275)
|...+.+++-.|.++.++ +.-|+.+||.+. |+..++|++++|.+ |++..+|+.+
T Consensus 160 D~~RK~EilpylERL~~e~~IPIlYVSHS~~-Ev~RLAd~vV~le~-GkV~A~g~~e 214 (352)
T COG4148 160 DLPRKREILPYLERLRDEINIPILYVSHSLD-EVLRLADRVVVLEN-GKVKASGPLE 214 (352)
T ss_pred ccchhhHHHHHHHHHHHhcCCCEEEEecCHH-HHHhhhheEEEecC-CeEEecCcHH
Confidence 999999999999999876 789999999985 79999999999996 7999999973
No 373
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-32 Score=318.61 Aligned_cols=191 Identities=24% Similarity=0.339 Sum_probs=158.8
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCcc------ccceEEEeccccccCCCCCHHHHHHHHHhc
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV------PQRTAAYISQHDVHIGEMTVRETLAFSARC 74 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~~------~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~ 74 (1275)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+||+||+.++...
T Consensus 33 i~~iiG~nGsGKSTLlk~L~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~~~~ig~v~q~~~l~~~~tv~eni~~~~~~ 109 (343)
T PRK11153 33 IFGVIGASGAGKSTLIRCINLLERPT---SGRVLVDGQDLTALSEKELRKARRQIGMIFQHFNLLSSRTVFDNVALPLEL 109 (343)
T ss_pred EEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCcCCHHHHHHHhcCEEEEeCCCccCCCCcHHHHHHHHHHH
Confidence 47999999999999999999999987 999999999875432 245799999999999999999999987543
Q ss_pred cCCCCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhh
Q 000808 75 QGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVT 154 (1275)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvs 154 (1275)
.+.. . .+....++++++.+||++..++ .++.|||||||||+
T Consensus 110 ~~~~----------~------------------------~~~~~~~~~~l~~~gL~~~~~~-----~~~~LSgGq~qRv~ 150 (343)
T PRK11153 110 AGTP----------K------------------------AEIKARVTELLELVGLSDKADR-----YPAQLSGGQKQRVA 150 (343)
T ss_pred cCCC----------H------------------------HHHHHHHHHHHHHcCCchhhhC-----ChhhCCHHHHHHHH
Confidence 2210 0 0011235668899999765544 45679999999999
Q ss_pred HHHHHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhhHH
Q 000808 155 TGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVL 234 (1275)
Q Consensus 155 iA~al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~~~ 234 (1275)
|||||+.+|++++|||||+|||+.++..+.+.|+++.+.. +++|++++|+.+++.++||++++|++|++++.|+++++.
T Consensus 151 lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~-g~tiilvtH~~~~i~~~~d~v~~l~~G~i~~~g~~~~~~ 229 (343)
T PRK11153 151 IARALASNPKVLLCDEATSALDPATTRSILELLKDINREL-GLTIVLITHEMDVVKRICDRVAVIDAGRLVEQGTVSEVF 229 (343)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 9999999999999999999999999999999999876532 456666888888999999999999999999999988774
No 374
>COG4586 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=5.2e-33 Score=288.99 Aligned_cols=202 Identities=26% Similarity=0.366 Sum_probs=171.4
Q ss_pred cceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCCc--ccccceEEEec-cCCCCCCCCC
Q 000808 703 LMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ--ETFTRISGYCE-QNDIHSPFVT 779 (1275)
Q Consensus 703 ~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~--~~~~~~~~~v~-q~~~~~~~lt 779 (1275)
..+++||||+|++|++++++|||||||||+||+|+|... +.+|.|.++|++.-. +.+-+.+++|+ |.-.+...+-
T Consensus 37 ~~AVqdisf~IP~G~ivgflGaNGAGKSTtLKmLTGll~--p~~G~v~V~G~~Pf~~~~~~~~~~~~v~gqk~ql~Wdlp 114 (325)
T COG4586 37 IEAVQDISFEIPKGEIVGFLGANGAGKSTTLKMLTGLLL--PTSGKVRVNGKDPFRRREEYLRSIGLVMGQKLQLWWDLP 114 (325)
T ss_pred hhhhheeeeecCCCcEEEEEcCCCCcchhhHHHHhCccc--cCCCeEEecCcCcchhHHHHHHHHHHHhhhhheeeeech
Confidence 358999999999999999999999999999999999876 348999999987532 23345566664 5555666677
Q ss_pred HHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCC
Q 000808 780 VYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 859 (1275)
Q Consensus 780 v~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsg 859 (1275)
+.|.+.....+. +.+..+-+++.+...+.|+|++..+..+ +.||-|||.|+.||.+|+++|+||||||||=|
T Consensus 115 ~~ds~~v~~~Iy---~Ipd~~F~~r~~~l~eiLdl~~~lk~~v-----r~LSlGqRmraeLaaaLLh~p~VLfLDEpTvg 186 (325)
T COG4586 115 ALDSLEVLKLIY---EIPDDEFAERLDFLTEILDLEGFLKWPV-----RKLSLGQRMRAELAAALLHPPKVLFLDEPTVG 186 (325)
T ss_pred hhhhHHHHHHHH---hCCHHHHHHHHHHHHHHhcchhhhhhhh-----hhccchHHHHHHHHHHhcCCCcEEEecCCccC
Confidence 777776544333 4556677788899999999998888776 57999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHhh-CCCEEEEEecCCCHHHHHhhhhhheeecCcEEEEECCCC
Q 000808 860 LDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVGPLG 916 (1275)
Q Consensus 860 LD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~~ 916 (1275)
||..++..|.+.|++..+ .++||+.+||+.+ ++...||||++++. |+++|.|+..
T Consensus 187 LDV~aq~~ir~Flke~n~~~~aTVllTTH~~~-di~~lc~rv~~I~~-Gqlv~dg~l~ 242 (325)
T COG4586 187 LDVNAQANIREFLKEYNEERQATVLLTTHIFD-DIATLCDRVLLIDQ-GQLVFDGTLA 242 (325)
T ss_pred cchhHHHHHHHHHHHHHHhhCceEEEEecchh-hHHHhhhheEEeeC-CcEeecccHH
Confidence 999999999999999865 4899999999997 79999999999996 7999999973
No 375
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=100.00 E-value=2.3e-32 Score=308.30 Aligned_cols=216 Identities=23% Similarity=0.328 Sum_probs=187.7
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 756 (1275)
.++++++++.++ ...+++|||++|++||+.||+|.||||||||+++|.|... +.+|+|.++|++.
T Consensus 4 ~l~~~~itK~f~-------------~~~And~V~l~v~~GeIHaLLGENGAGKSTLm~iL~G~~~--P~~GeI~v~G~~v 68 (501)
T COG3845 4 ALEMRGITKRFP-------------GVVANDDVSLSVKKGEIHALLGENGAGKSTLMKILFGLYQ--PDSGEIRVDGKEV 68 (501)
T ss_pred eEEEeccEEEcC-------------CEEecCceeeeecCCcEEEEeccCCCCHHHHHHHHhCccc--CCcceEEECCEEe
Confidence 578888887764 3569999999999999999999999999999999999876 3589999999986
Q ss_pred Cc----ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCH
Q 000808 757 KQ----ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLST 832 (1275)
Q Consensus 757 ~~----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSg 832 (1275)
.- +..+.-+|.|.|+..+.|++||.||+..+..-......+.....++++++.+..||.--.|.+++ .||-
T Consensus 69 ~~~sP~dA~~~GIGMVhQHF~Lv~~lTV~ENiiLg~e~~~~~~~~~~~~~~~i~~l~~~yGl~vdp~~~V~-----dLsV 143 (501)
T COG3845 69 RIKSPRDAIRLGIGMVHQHFMLVPTLTVAENIILGLEPSKGGLIDRRQARARIKELSERYGLPVDPDAKVA-----DLSV 143 (501)
T ss_pred ccCCHHHHHHcCCcEEeeccccccccchhhhhhhcCccccccccCHHHHHHHHHHHHHHhCCCCCccceee-----cCCc
Confidence 42 23345689999999999999999999887543222234556667789999999999888888875 5999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcEEEEE
Q 000808 833 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYV 912 (1275)
Q Consensus 833 Gerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~ 912 (1275)
||||||.|-++|.++|++|||||||+-|-|.....+.++|++++++|+|||++||... |+.+.+|++.+|.+ |+++-.
T Consensus 144 G~qQRVEIlKaLyr~a~iLILDEPTaVLTP~E~~~lf~~l~~l~~~G~tIi~ITHKL~-Ev~~iaDrvTVLR~-Gkvvgt 221 (501)
T COG3845 144 GEQQRVEILKALYRGARLLILDEPTAVLTPQEADELFEILRRLAAEGKTIIFITHKLK-EVMAIADRVTVLRR-GKVVGT 221 (501)
T ss_pred chhHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHH-HHHHhhCeeEEEeC-CeEEee
Confidence 9999999999999999999999999999999999999999999999999999999986 79999999999996 677766
Q ss_pred CC
Q 000808 913 GP 914 (1275)
Q Consensus 913 g~ 914 (1275)
-+
T Consensus 222 ~~ 223 (501)
T COG3845 222 VD 223 (501)
T ss_pred ec
Confidence 55
No 376
>cd03216 ABC_Carb_Monos_I This family represents the domain I of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. Pentoses include xylose, arabinose, and ribose. Important hexoses include glucose, galactose, and fructose. In members of the Carb_monos family, the single hydrophobic gene product forms a homodimer while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=100.00 E-value=2.5e-32 Score=282.82 Aligned_cols=158 Identities=28% Similarity=0.418 Sum_probs=136.2
Q ss_pred EEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCC
Q 000808 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1275)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 757 (1275)
++++|+++.++ ++++++|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 1 l~~~~l~~~~~-------------~~~vl~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~v~~~g~~~~ 65 (163)
T cd03216 1 LELRGITKRFG-------------GVKALDGVSLSVRRGEVHALLGENGAGKSTLMKILSGLYK--PDSGEILVDGKEVS 65 (163)
T ss_pred CEEEEEEEEEC-------------CeEEEeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEECC
Confidence 35788888763 2359999999999999999999999999999999999876 34799999998754
Q ss_pred cc----cccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHH
Q 000808 758 QE----TFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTE 833 (1275)
Q Consensus 758 ~~----~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgG 833 (1275)
.. ..++.++|++| ||||
T Consensus 66 ~~~~~~~~~~~i~~~~q-----------------------------------------------------------LS~G 86 (163)
T cd03216 66 FASPRDARRAGIAMVYQ-----------------------------------------------------------LSVG 86 (163)
T ss_pred cCCHHHHHhcCeEEEEe-----------------------------------------------------------cCHH
Confidence 31 12345777777 8999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcEEEE
Q 000808 834 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQEIY 911 (1275)
Q Consensus 834 erqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~ 911 (1275)
||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++.++|.|||+++|++. ++.+.+|++++|.+ |++++
T Consensus 87 ~~qrl~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~-~~~~~~d~~~~l~~-g~i~~ 162 (163)
T cd03216 87 ERQMVEIARALARNARLLILDEPTAALTPAEVERLFKVIRRLRAQGVAVIFISHRLD-EVFEIADRVTVLRD-GRVVG 162 (163)
T ss_pred HHHHHHHHHHHhcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEe
Confidence 999999999999999999999999999999999999999998777899999999975 46678999999986 67654
No 377
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.5e-32 Score=300.52 Aligned_cols=190 Identities=29% Similarity=0.374 Sum_probs=155.5
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCc--cccceEEEeccccccCCCCCHHHHHHHHHhccCCC
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEF--VPQRTAAYISQHDVHIGEMTVRETLAFSARCQGVG 78 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~--~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~ 78 (1275)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++|++|++.+++.+||+||+.+.....+..
T Consensus 28 ~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~ 104 (220)
T cd03265 28 IFGLLGPNGAGKTTTIKMLTTLLKPT---SGRATVAGHDVVREPREVRRRIGIVFQDLSVDDELTGWENLYIHARLYGVP 104 (220)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEecCcChHHHhhcEEEecCCccccccCcHHHHHHHHHHHcCCC
Confidence 47999999999999999999999887 99999999876432 22357999999998899999999999865432110
Q ss_pred CcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhhHHHH
Q 000808 79 SRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEM 158 (1275)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~a 158 (1275)
..+....++++++.+||++..++. +..|||||||||+||+|
T Consensus 105 ----------------------------------~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qr~~la~a 145 (220)
T cd03265 105 ----------------------------------GAERRERIDELLDFVGLLEAADRL-----VKTYSGGMRRRLEIARS 145 (220)
T ss_pred ----------------------------------HHHHHHHHHHHHHHcCCHHHhhCC-----hhhCCHHHHHHHHHHHH
Confidence 000112356788999997655544 45799999999999999
Q ss_pred HhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhhH
Q 000808 159 MVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELV 233 (1275)
Q Consensus 159 l~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~~ 233 (1275)
++.+|++++|||||+|||+.++..+.+.++++.+.. ++++++++|+.+++...+|++++|++|+++..|+++++
T Consensus 146 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 219 (220)
T cd03265 146 LVHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEF-GMTILLTTHYMEEAEQLCDRVAIIDHGRIIAEGTPEEL 219 (220)
T ss_pred HhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEeCChHHc
Confidence 999999999999999999999999999999876532 45666688999999999999999999999999887653
No 378
>TIGR01192 chvA glucan exporter ATP-binding protein. This model describes glucan exporter ATP binding protein in bacteria. It belongs to the larger ABC transporter superfamily with the characteristic ATP binding motif. The In general, this protein is in some ways implicated in osmoregulation and suggested to participate in the export of glucan from the cytoplasm to periplasm. The cyclic beta-1,2-glucan in the bactrerial periplasmic space is suggested to confer the property of high osmolority. It has also been demonstrated that mutants in this loci have lost functions of virulence and motility. It is unclear as to how virulence and osmoadaptaion are related.
Probab=100.00 E-value=2.2e-32 Score=340.90 Aligned_cols=212 Identities=25% Similarity=0.310 Sum_probs=171.5
Q ss_pred cEEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCcc
Q 000808 676 HSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 755 (1275)
Q Consensus 676 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~ 755 (1275)
..++++|++++++ +++++|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.+||.+
T Consensus 333 ~~i~~~~v~~~y~------------~~~~~l~~i~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~--~~~G~i~~~g~~ 398 (585)
T TIGR01192 333 GAVEFRHITFEFA------------NSSQGVFDVSFEAKAGQTVAIVGPTGAGKTTLINLLQRVYD--PTVGQILIDGID 398 (585)
T ss_pred CeEEEEEEEEECC------------CCCccccceeEEEcCCCEEEEECCCCCCHHHHHHHHccCCC--CCCCEEEECCEE
Confidence 4699999999874 12358999999999999999999999999999999999876 358999999987
Q ss_pred CCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCc-------cccccccCC
Q 000808 756 KKQ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNP-------LRQSLVGLP 825 (1275)
Q Consensus 756 ~~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~-------~~~~~~~~~ 825 (1275)
... ..+++.++|++|++.+++ .|++||+.++. + +.++++ ++++++..++.+ -.|+.+|..
T Consensus 399 ~~~~~~~~~~~~i~~v~q~~~lf~-~ti~~Ni~~~~----~-~~~~~~----~~~a~~~~~~~~~i~~l~~g~~t~~~~~ 468 (585)
T TIGR01192 399 INTVTRESLRKSIATVFQDAGLFN-RSIRENIRLGR----E-GATDEE----VYEAAKAAAAHDFILKRSNGYDTLVGER 468 (585)
T ss_pred hhhCCHHHHHhheEEEccCCccCc-ccHHHHHhcCC----C-CCCHHH----HHHHHHHhCcHHHHHhccccccchhcCC
Confidence 643 345678999999998876 69999997642 1 222222 334444444432 234555543
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeec
Q 000808 826 GESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKR 905 (1275)
Q Consensus 826 ~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~ 905 (1275)
..+||||||||++|||||+++|++|+|||||||||+.++..+.+.|+++. +++|+|+++|+++ ..+.+|++++|++
T Consensus 469 -~~~LSgGq~qrl~lARall~~p~ililDEpts~LD~~~~~~i~~~l~~~~-~~~tvI~isH~~~--~~~~~d~i~~l~~ 544 (585)
T TIGR01192 469 -GNRLSGGERQRLAIARAILKNAPILVLDEATSALDVETEARVKNAIDALR-KNRTTFIIAHRLS--TVRNADLVLFLDQ 544 (585)
T ss_pred -CCCCCHHHHHHHHHHHHHhcCCCEEEEECCccCCCHHHHHHHHHHHHHHh-CCCEEEEEEcChH--HHHcCCEEEEEEC
Confidence 45799999999999999999999999999999999999999999999874 4899999999985 4577999999986
Q ss_pred CcEEEEECCCC
Q 000808 906 GGQEIYVGPLG 916 (1275)
Q Consensus 906 gg~~~~~g~~~ 916 (1275)
|+++..|+.+
T Consensus 545 -G~i~~~g~~~ 554 (585)
T TIGR01192 545 -GRLIEKGSFQ 554 (585)
T ss_pred -CEEEEECCHH
Confidence 7899999863
No 379
>TIGR02857 CydD thiol reductant ABC exporter, CydD subunit. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD
Probab=100.00 E-value=8.7e-33 Score=342.64 Aligned_cols=201 Identities=28% Similarity=0.447 Sum_probs=166.8
Q ss_pred cEEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCcc
Q 000808 676 HSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 755 (1275)
Q Consensus 676 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~ 755 (1275)
..++++|++++++. .++++|+|+|++++|||+++|+||||||||||+|+|+|..++ .+|+|.+||.+
T Consensus 319 ~~i~~~~v~f~y~~-----------~~~~il~~i~l~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~--~~G~I~~~g~~ 385 (529)
T TIGR02857 319 PSLEFSGLSVAYPG-----------RRAPALRPVSFTVPPGERVALVGPSGAGKSTLLNLLLGFVDP--TEGSIAVNGVP 385 (529)
T ss_pred CeEEEEEEEEECCC-----------CCcccccceeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCcEEEECCEe
Confidence 36999999999841 124699999999999999999999999999999999998763 47999999998
Q ss_pred CCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCcc-------ccccccCC
Q 000808 756 KKQ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPL-------RQSLVGLP 825 (1275)
Q Consensus 756 ~~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~-------~~~~~~~~ 825 (1275)
..+ ..+++.++||+|++.+++ .|++||+.++. + +.+ ++.++++++..++.+. .|+.+|..
T Consensus 386 i~~~~~~~lr~~i~~v~Q~~~lf~-~ti~~Ni~~~~----~-~~~----~~~i~~a~~~~~l~~~i~~lp~Gldt~v~e~ 455 (529)
T TIGR02857 386 LADADADSWRDQIAWVPQHPFLFA-GTIAENIRLAR----P-DAS----DAEIRRALERAGLDEFVAALPQGLDTLIGEG 455 (529)
T ss_pred hhhCCHHHHHhheEEEcCCCcccC-cCHHHHHhccC----C-CCC----HHHHHHHHHHcCcHHHHHhCcccccchhccc
Confidence 653 356778999999998886 59999997642 1 122 2346677777777543 35566543
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhhee
Q 000808 826 GESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLM 903 (1275)
Q Consensus 826 ~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l 903 (1275)
...||||||||++|||||+++|++++||||||+||+.+++.+.+.++++. +++|+|+++|+++ ..+.+|++++|
T Consensus 456 -g~~LSgGq~qri~laRal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~--~~~~~d~i~~l 529 (529)
T TIGR02857 456 -GAGLSGGQAQRLALARAFLRDAPLLLLDEPTAHLDAETEALVTEALRALA-QGRTVLLVTHRLA--LAERADRIVVL 529 (529)
T ss_pred -cccCCHHHHHHHHHHHHHhcCCCEEEEeCcccccCHHHHHHHHHHHHHhc-CCCEEEEEecCHH--HHHhCCEEEeC
Confidence 35799999999999999999999999999999999999999999999875 5899999999974 56789999875
No 380
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=1.9e-32 Score=313.28 Aligned_cols=191 Identities=26% Similarity=0.360 Sum_probs=157.7
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCc--cccceEEEeccccccCCCCCHHHHHHHHHhccCCC
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEF--VPQRTAAYISQHDVHIGEMTVRETLAFSARCQGVG 78 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~--~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~ 78 (1275)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++|++|++.+++.+||+||+.+.....+..
T Consensus 32 ~~~l~G~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~ 108 (303)
T TIGR01288 32 CFGLLGPNGAGKSTIARMLLGMISPD---RGKITVLGEPVPSRARLARVAIGVVPQFDNLDPEFTVRENLLVFGRYFGMS 108 (303)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECcccHHHHhhcEEEEeccccCCcCCcHHHHHHHHHHHcCCC
Confidence 47999999999999999999999887 99999999876432 22467999999998889999999998754322100
Q ss_pred CcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhhHHHH
Q 000808 79 SRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEM 158 (1275)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~a 158 (1275)
. .+....++.+++.++|++..++.+ ++|||||||||+||+|
T Consensus 109 ----------~------------------------~~~~~~~~~ll~~~~l~~~~~~~~-----~~LSgG~~qrv~la~a 149 (303)
T TIGR01288 109 ----------T------------------------REIEAVIPSLLEFARLESKADVRV-----ALLSGGMKRRLTLARA 149 (303)
T ss_pred ----------H------------------------HHHHHHHHHHHHHCCChhHhcCch-----hhCCHHHHHHHHHHHH
Confidence 0 000112456788899987666544 5799999999999999
Q ss_pred HhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhhHHH
Q 000808 159 MVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVLD 235 (1275)
Q Consensus 159 l~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~~~~ 235 (1275)
|+.+|++++|||||+|||+.++.++.+.++++.+ . +.+|+.++|+.+++.++||++++|++|++++.|+++++.+
T Consensus 150 l~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~-~-g~til~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 224 (303)
T TIGR01288 150 LINDPQLLILDEPTTGLDPHARHLIWERLRSLLA-R-GKTILLTTHFMEEAERLCDRLCVLESGRKIAEGRPHALID 224 (303)
T ss_pred HhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh-C-CCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 9999999999999999999999999999998754 3 5566678999999999999999999999999999988754
No 381
>cd03250 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=2.5e-32 Score=294.99 Aligned_cols=195 Identities=21% Similarity=0.394 Sum_probs=148.4
Q ss_pred EEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCC
Q 000808 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1275)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 757 (1275)
++++|+++.+.... ...+.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|
T Consensus 1 l~~~~l~~~~~~~~--------~~~~~il~~~s~~i~~G~~~~i~G~nG~GKSTLl~~i~G~~~--~~~G~i~~~g---- 66 (204)
T cd03250 1 ISVEDASFTWDSGE--------QETSFTLKDINLEVPKGELVAIVGPVGSGKSSLLSALLGELE--KLSGSVSVPG---- 66 (204)
T ss_pred CEEeEEEEecCCCC--------ccccceeeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCcCC--CCCCeEEEcC----
Confidence 35788887763100 001359999999999999999999999999999999999765 3579999998
Q ss_pred cccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCcccc-------ccccCCCCCCC
Q 000808 758 QETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQ-------SLVGLPGESGL 830 (1275)
Q Consensus 758 ~~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~-------~~~~~~~~~~l 830 (1275)
.++|++|++.++ ..|++||+.+... ...+ ...+.++.+++.+..+ +.... ....|
T Consensus 67 ------~i~~~~q~~~l~-~~t~~enl~~~~~------~~~~----~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~l 128 (204)
T cd03250 67 ------SIAYVSQEPWIQ-NGTIRENILFGKP------FDEE----RYEKVIKACALEPDLEILPDGDLTEIGE-KGINL 128 (204)
T ss_pred ------EEEEEecCchhc-cCcHHHHhccCCC------cCHH----HHHHHHHHcCcHHHHHhccCcccceecC-CCCcC
Confidence 489999999887 4699999976421 1111 1233444444432211 11111 23579
Q ss_pred CHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHH-HHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecC
Q 000808 831 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMR-TVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRG 906 (1275)
Q Consensus 831 SgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~-~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~g 906 (1275)
|+|||||++|||+|+.+|++++|||||+|||+.+...+.+ ++++..++|+|||+++|+++ .+.. +|++++|++|
T Consensus 129 S~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~ll~~~~~~~~tvi~~sh~~~-~~~~-~d~i~~l~~G 203 (204)
T cd03250 129 SGGQKQRISLARAVYSDADIYLLDDPLSAVDAHVGRHIFENCILGLLLNNKTRILVTHQLQ-LLPH-ADQIVVLDNG 203 (204)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHhccCCCEEEEEeCCHH-HHhh-CCEEEEEeCC
Confidence 9999999999999999999999999999999999999988 56666666899999999975 3444 9999999863
No 382
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-32 Score=319.19 Aligned_cols=191 Identities=20% Similarity=0.298 Sum_probs=158.8
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCccc-------cceEEEeccccccCCCCCHHHHHHHHHh
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFVP-------QRTAAYISQHDVHIGEMTVRETLAFSAR 73 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~~~-------~~~~~yv~Q~~~~~~~lTv~e~l~f~~~ 73 (1275)
+++|+||||||||||+++|+|+++|+ +|+|.++|.++..... ++.++|++|++.+++.+||+||+.++..
T Consensus 56 i~~LvG~NGsGKSTLLr~I~Gl~~p~---sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l~~~~Tv~enl~~~~~ 132 (400)
T PRK10070 56 IFVIMGLSGSGKSTMVRLLNRLIEPT---RGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPHMTVLDNTAFGME 132 (400)
T ss_pred EEEEECCCCchHHHHHHHHHcCCCCC---CCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcCCCCCCHHHHHHHHHH
Confidence 47999999999999999999999987 9999999998754321 2479999999999999999999999765
Q ss_pred ccCCCCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchh
Q 000808 74 CQGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRV 153 (1275)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv 153 (1275)
..+... .+....++++++.+||.+..+ +.++.|||||||||
T Consensus 133 ~~~~~~----------------------------------~~~~~~~~e~L~~~gL~~~~~-----~~~~~LSgGq~QRv 173 (400)
T PRK10070 133 LAGINA----------------------------------EERREKALDALRQVGLENYAH-----SYPDELSGGMRQRV 173 (400)
T ss_pred hcCCCH----------------------------------HHHHHHHHHHHHHcCCChhhh-----cCcccCCHHHHHHH
Confidence 432100 001123566889999976544 44568999999999
Q ss_pred hHHHHHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhhH
Q 000808 154 TTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELV 233 (1275)
Q Consensus 154 siA~al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~~ 233 (1275)
+|||||+.+|++|||||||+|||+.++.++.+.|+++.+.. +++|++++|+.+++.+++|+|++|++|++++.|+++++
T Consensus 174 ~LArAL~~~P~iLLLDEPts~LD~~~r~~l~~~L~~l~~~~-g~TIIivTHd~~~~~~~~Dri~vL~~G~i~~~g~~~~l 252 (400)
T PRK10070 174 GLARALAINPDILLMDEAFSALDPLIRTEMQDELVKLQAKH-QRTIVFISHDLDEAMRIGDRIAIMQNGEVVQVGTPDEI 252 (400)
T ss_pred HHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHC-CCeEEEEECCHHHHHHhCCEEEEEECCEEEecCCHHHH
Confidence 99999999999999999999999999999999999875433 45566688889999999999999999999999998876
Q ss_pred H
Q 000808 234 L 234 (1275)
Q Consensus 234 ~ 234 (1275)
.
T Consensus 253 ~ 253 (400)
T PRK10070 253 L 253 (400)
T ss_pred H
Confidence 4
No 383
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2e-32 Score=298.01 Aligned_cols=185 Identities=26% Similarity=0.383 Sum_probs=150.7
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCcc-ccceEEEeccccccCCCCCHHHHHHHHHhccCCCC
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV-PQRTAAYISQHDVHIGEMTVRETLAFSARCQGVGS 79 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~~-~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~ 79 (1275)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+||+||+.++....+..
T Consensus 28 ~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~- 103 (213)
T cd03259 28 FLALLGPSGCGKTTLLRLIAGLERPD---SGEILIDGRDVTGVPPERRNIGMVFQDYALFPHLTVAENIAFGLKLRGVP- 103 (213)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CeEEEECCEEcCcCchhhccEEEEcCchhhccCCcHHHHHHhHHHHcCCC-
Confidence 47999999999999999999999887 999999998875422 2457999999988888999999998864321100
Q ss_pred cchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhhHHHHH
Q 000808 80 RYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEMM 159 (1275)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~al 159 (1275)
. .+....++++++.+||++..++ .+..|||||||||+|||||
T Consensus 104 ---------~------------------------~~~~~~~~~~l~~~~l~~~~~~-----~~~~LSgG~~qrl~la~al 145 (213)
T cd03259 104 ---------K------------------------AEIRARVRELLELVGLEGLLNR-----YPHELSGGQQQRVALARAL 145 (213)
T ss_pred ---------H------------------------HHHHHHHHHHHHHcCChhhhhc-----ChhhCCHHHHHHHHHHHHH
Confidence 0 0011124567888999765544 3457999999999999999
Q ss_pred hcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEec
Q 000808 160 VGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQG 228 (1275)
Q Consensus 160 ~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G 228 (1275)
+.+|++++|||||+|||+.++.++.+.++++++. .+++|++++|+.+++.++||++++|++|++++.|
T Consensus 146 ~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~g 213 (213)
T cd03259 146 AREPSLLLLDEPLSALDAKLREELREELKELQRE-LGITTIYVTHDQEEALALADRIAVMNEGRIVQVG 213 (213)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHH-cCCEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 9999999999999999999999999999987643 2455666888888999999999999999998765
No 384
>KOG0059 consensus Lipid exporter ABCA1 and related proteins, ABC superfamily [Lipid transport and metabolism; General function prediction only]
Probab=100.00 E-value=1.9e-30 Score=333.86 Aligned_cols=223 Identities=28% Similarity=0.390 Sum_probs=193.0
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 756 (1275)
.+..++++..+.. .+.+++++|+.|++||+.|++|+|||||||++|+|.|..+ +.+|++.++|++.
T Consensus 564 ~~~~~~L~k~y~~------------~~~Av~~ls~~V~~gecfgLLG~NGAGKtT~f~mltG~~~--~t~G~a~i~g~~i 629 (885)
T KOG0059|consen 564 ALVLNNLSKVYGG------------KDGAVRGLSFAVPPGECFGLLGVNGAGKTTTFKMLTGETK--PTSGEALIKGHDI 629 (885)
T ss_pred eEEEcceeeeecc------------hhhhhcceEEEecCCceEEEecCCCCCchhhHHHHhCCcc--CCcceEEEecCcc
Confidence 4666677655531 1119999999999999999999999999999999999876 4589999999987
Q ss_pred Cc----ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCH
Q 000808 757 KQ----ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLST 832 (1275)
Q Consensus 757 ~~----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSg 832 (1275)
.. ...++.+|||||+|.+.+.+|.||++.+.+++|. ....+.++.++.+++.++|.+.+++.++ .+||
T Consensus 630 ~~~~~~~~~~~~iGyCPQ~d~l~~~lT~rEhL~~~arlrG---~~~~di~~~v~~ll~~~~L~~~~~~~~~-----~ySg 701 (885)
T KOG0059|consen 630 TVSTDFQQVRKQLGYCPQFDALWEELTGREHLEFYARLRG---LPRSDIGSAIEKLLRLVGLGPYANKQVR-----TYSG 701 (885)
T ss_pred ccccchhhhhhhcccCCchhhhhhhccHHHHHHHHHHHcC---CChhHHHHHHHHHHHHcCChhhhccchh-----hCCC
Confidence 53 1256789999999999999999999999999884 3344556679999999999999999875 6999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcEEEEE
Q 000808 833 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYV 912 (1275)
Q Consensus 833 Gerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~ 912 (1275)
|+|||+++|.||+.+|++++|||||+|+||.+++.++++++++.++|+.||.|||..+ |...+|||+.+|.+ |+....
T Consensus 702 G~kRkLs~aialig~p~vi~LDEPstGmDP~arr~lW~ii~~~~k~g~aiiLTSHsMe-E~EaLCtR~aImv~-G~l~ci 779 (885)
T KOG0059|consen 702 GNKRRLSFAIALIGDPSVILLDEPSTGLDPKARRHLWDIIARLRKNGKAIILTSHSME-EAEALCTRTAIMVI-GQLRCI 779 (885)
T ss_pred cchhhHHHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHHhhhhheeec-CeeEEe
Confidence 9999999999999999999999999999999999999999999888789999999865 67779999999997 789999
Q ss_pred CCCCccchHHHHHHh
Q 000808 913 GPLGRHSCHLIRYFE 927 (1275)
Q Consensus 913 g~~~~~~~~~~~~f~ 927 (1275)
|++ +++...|.
T Consensus 780 Gs~----q~LKsrfG 790 (885)
T KOG0059|consen 780 GSP----QELKSRYG 790 (885)
T ss_pred cCh----HHHHhhcC
Confidence 998 56666654
No 385
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3e-32 Score=306.38 Aligned_cols=191 Identities=24% Similarity=0.327 Sum_probs=156.6
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCcc-------ccceEEEeccccccCCCCCHHHHHHHHHh
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV-------PQRTAAYISQHDVHIGEMTVRETLAFSAR 73 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~~-------~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~ 73 (1275)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+||+||+.+...
T Consensus 52 ~~~l~G~nGsGKSTLl~~L~Gl~~p~---~G~i~i~g~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~ 128 (269)
T cd03294 52 IFVIMGLSGSGKSTLLRCINRLIEPT---SGKVLIDGQDIAAMSRKELRELRRKKISMVFQSFALLPHRTVLENVAFGLE 128 (269)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEccccChhhhhhhhcCcEEEEecCcccCCCCcHHHHHHHHHH
Confidence 47999999999999999999999887 999999998875421 13469999999999989999999998654
Q ss_pred ccCCCCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchh
Q 000808 74 CQGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRV 153 (1275)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv 153 (1275)
..+.. . .+....++++++.+||++..++. ++.|||||||||
T Consensus 129 ~~~~~-------~---------------------------~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~Gq~qrv 169 (269)
T cd03294 129 VQGVP-------R---------------------------AEREERAAEALELVGLEGWEHKY-----PDELSGGMQQRV 169 (269)
T ss_pred hcCCC-------H---------------------------HHHHHHHHHHHHHcCCHhHhhCC-----cccCCHHHHHHH
Confidence 32100 0 00112345678899997665544 457999999999
Q ss_pred hHHHHHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhhH
Q 000808 154 TTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELV 233 (1275)
Q Consensus 154 siA~al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~~ 233 (1275)
+|||||+.+|++++|||||+|||+.++.++.+.++++.+. .+.+|++++|+.+++.+++|++++|++|++++.|+++++
T Consensus 170 ~lAral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~-~g~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 248 (269)
T cd03294 170 GLARALAVDPDILLMDEAFSALDPLIRREMQDELLRLQAE-LQKTIVFITHDLDEALRLGDRIAIMKDGRLVQVGTPEEI 248 (269)
T ss_pred HHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999987643 245566678888889999999999999999999988776
Q ss_pred H
Q 000808 234 L 234 (1275)
Q Consensus 234 ~ 234 (1275)
.
T Consensus 249 ~ 249 (269)
T cd03294 249 L 249 (269)
T ss_pred H
Confidence 4
No 386
>TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.
Probab=100.00 E-value=1.7e-32 Score=344.27 Aligned_cols=213 Identities=25% Similarity=0.401 Sum_probs=175.0
Q ss_pred cEEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCcc
Q 000808 676 HSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 755 (1275)
Q Consensus 676 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~ 755 (1275)
..++++|++++++.. +++.+|+|+|++++|||+++|+|+||||||||+|+|+|..++ .+|+|.+||.+
T Consensus 336 ~~i~~~~v~f~y~~~----------~~~~iL~~inl~i~~Ge~i~IvG~sGsGKSTLlklL~gl~~p--~~G~I~i~g~~ 403 (576)
T TIGR02204 336 GEIEFEQVNFAYPAR----------PDQPALDGLNLTVRPGETVALVGPSGAGKSTLFQLLLRFYDP--QSGRILLDGVD 403 (576)
T ss_pred ceEEEEEEEEECCCC----------CCCccccceeEEecCCCEEEEECCCCCCHHHHHHHHHhccCC--CCCEEEECCEE
Confidence 469999999998521 124699999999999999999999999999999999998763 47999999987
Q ss_pred CCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCcc-------ccccccCC
Q 000808 756 KKQ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPL-------RQSLVGLP 825 (1275)
Q Consensus 756 ~~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~-------~~~~~~~~ 825 (1275)
.+. ..+++.++|+||++.+++ .|++||+.++. + +.+ +++++++++.+++.+. .|+.+|..
T Consensus 404 i~~~~~~~~~~~i~~~~Q~~~lf~-~Ti~~Ni~~~~----~-~~~----~~~~~~~l~~~~l~~~i~~l~~gl~t~i~~~ 473 (576)
T TIGR02204 404 LRQLDPAELRARMALVPQDPVLFA-ASVMENIRYGR----P-DAT----DEEVEAAARAAHAHEFISALPEGYDTYLGER 473 (576)
T ss_pred HHhcCHHHHHHhceEEccCCcccc-ccHHHHHhcCC----C-CCC----HHHHHHHHHHcCcHHHHHhCCCCCCceeCCC
Confidence 643 345678999999998875 59999997641 1 122 2346677777776533 24445443
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeec
Q 000808 826 GESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKR 905 (1275)
Q Consensus 826 ~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~ 905 (1275)
...||||||||++||||++++|++++||||||+||+.+++.+.+.|+++. +++|+|++||+++ ....+|++++|++
T Consensus 474 -g~~LSgGq~Qrl~laRal~~~~~ililDEpts~lD~~~~~~i~~~l~~~~-~~~t~IiitH~~~--~~~~~d~vi~l~~ 549 (576)
T TIGR02204 474 -GVTLSGGQRQRIAIARAILKDAPILLLDEATSALDAESEQLVQQALETLM-KGRTTLIIAHRLA--TVLKADRIVVMDQ 549 (576)
T ss_pred -CCcCCHHHHHHHHHHHHHHhCCCeEEEeCcccccCHHHHHHHHHHHHHHh-CCCEEEEEecchH--HHHhCCEEEEEEC
Confidence 45799999999999999999999999999999999999999999999875 4899999999974 5678999999986
Q ss_pred CcEEEEECCC
Q 000808 906 GGQEIYVGPL 915 (1275)
Q Consensus 906 gg~~~~~g~~ 915 (1275)
|+++..|+.
T Consensus 550 -g~~~~~g~~ 558 (576)
T TIGR02204 550 -GRIVAQGTH 558 (576)
T ss_pred -CEEEeeecH
Confidence 789998885
No 387
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.98 E-value=3.6e-32 Score=301.32 Aligned_cols=195 Identities=25% Similarity=0.365 Sum_probs=155.7
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCcc-ccceEEEeccccccCCCCCHHHHHHHHHhccCCCC
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV-PQRTAAYISQHDVHIGEMTVRETLAFSARCQGVGS 79 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~~-~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~ 79 (1275)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+||+||+.++....+...
T Consensus 30 ~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~ 106 (239)
T cd03296 30 LVALLGPSGSGKTTLLRLIAGLERPD---SGTILFGGEDATDVPVQERNVGFVFQHYALFRHMTVFDNVAFGLRVKPRSE 106 (239)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCCccccceEEEecCCcccCCCCHHHHHhhhhhhccccc
Confidence 47999999999999999999999887 999999998865432 23579999999888889999999998654221000
Q ss_pred cchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhhHHHHH
Q 000808 80 RYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEMM 159 (1275)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~al 159 (1275)
+.+ ..+....++.+++.+||++..++ .+.+|||||||||+|||||
T Consensus 107 ~~~------------------------------~~~~~~~~~~~l~~~~l~~~~~~-----~~~~LS~G~~qrl~la~al 151 (239)
T cd03296 107 RPP------------------------------EAEIRAKVHELLKLVQLDWLADR-----YPAQLSGGQRQRVALARAL 151 (239)
T ss_pred cCC------------------------------HHHHHHHHHHHHHHcCChhhhhc-----ChhhCCHHHHHHHHHHHHH
Confidence 000 00011234567888998755443 4557999999999999999
Q ss_pred hcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhhHH
Q 000808 160 VGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVL 234 (1275)
Q Consensus 160 ~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~~~ 234 (1275)
+.+|++++|||||+|||+.++..+.+.++++++.. +.+|++++|+.+++...+|++++|++|++++.|+++++.
T Consensus 152 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~-~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 225 (239)
T cd03296 152 AVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDEL-HVTTVFVTHDQEEALEVADRVVVMNKGRIEQVGTPDEVY 225 (239)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHHh
Confidence 99999999999999999999999999999876532 445666788888899999999999999999999887753
No 388
>cd03290 ABCC_SUR1_N The SUR domain 1. The sulfonylurea receptor SUR is an ATP transporter of the ABCC/MRP family with tandem ATPase binding domains. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=99.98 E-value=6.9e-32 Score=294.81 Aligned_cols=187 Identities=24% Similarity=0.328 Sum_probs=147.3
Q ss_pred cceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCCc-------ccccceEEEeccCCCCC
Q 000808 703 LMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ-------ETFTRISGYCEQNDIHS 775 (1275)
Q Consensus 703 ~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~-------~~~~~~~~~v~q~~~~~ 775 (1275)
+.+++|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+... ...++.++|++|++.++
T Consensus 14 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 91 (218)
T cd03290 14 LATLSNINIRIPTGQLTMIVGQVGCGKSSLLLAILGEMQ--TLEGKVHWSNKNESEPSFEATRSRNRYSVAYAAQKPWLL 91 (218)
T ss_pred CcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCC--CCCCeEEECCcccccccccccchhhcceEEEEcCCCccc
Confidence 469999999999999999999999999999999999865 347999999986532 12345689999998877
Q ss_pred CCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccc-------cccCCCCCCCCHHHHHHHHHHHHHhhCC
Q 000808 776 PFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQS-------LVGLPGESGLSTEQRKRLTIAVELVANP 848 (1275)
Q Consensus 776 ~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~-------~~~~~~~~~lSgGerqrv~ia~~l~~~p 848 (1275)
..|++||+.+... ... +...++++.+++.+..+. ..+. ....||||||||++|||+|+.+|
T Consensus 92 -~~t~~~nl~~~~~------~~~----~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~LS~G~~qrv~laral~~~p 159 (218)
T cd03290 92 -NATVEENITFGSP------FNK----QRYKAVTDACSLQPDIDLLPFGDQTEIGE-RGINLSGGQRQRICVARALYQNT 159 (218)
T ss_pred -cccHHHHHhhcCc------CCH----HHHHHHHHHhCcHHHHHhCcCccccCccc-CCCcCCHHHHHHHHHHHHHhhCC
Confidence 5799999976421 111 123455666666443221 1111 23579999999999999999999
Q ss_pred cEEEEeCCCCCCCHHHHHHHHH--HHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeec
Q 000808 849 SIIFMDEPTSGLDARAAAIVMR--TVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKR 905 (1275)
Q Consensus 849 ~illlDEPtsgLD~~~~~~i~~--~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~ 905 (1275)
++++|||||+|||+.+...+++ .++.+.++|+|+|+++|+++ .+ ..+|++++|.+
T Consensus 160 ~illlDEPt~~LD~~~~~~l~~~~ll~~~~~~~~tii~~sH~~~-~~-~~~d~i~~l~~ 216 (218)
T cd03290 160 NIVFLDDPFSALDIHLSDHLMQEGILKFLQDDKRTLVLVTHKLQ-YL-PHADWIIAMKD 216 (218)
T ss_pred CEEEEeCCccccCHHHHHHHHHHHHHHHHhcCCCEEEEEeCChH-HH-hhCCEEEEecC
Confidence 9999999999999999999998 66666566899999999986 34 57999999985
No 389
>cd03228 ABCC_MRP_Like The MRP (Mutidrug Resistance Protein)-like transporters are involved in drug, peptide, and lipid export. They belong to the subfamily C of the ATP-binding cassette (ABC) superfamily of transport proteins. The ABCC subfamily contains transporters with a diverse functional spectrum that includes ion transport, cell surface receptor, and toxin secretion activities. The MRP-like family, simlar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains, each composed of six transmembrane (TM) helices, and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.98 E-value=2.9e-32 Score=285.31 Aligned_cols=166 Identities=31% Similarity=0.512 Sum_probs=141.1
Q ss_pred EEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCCc
Q 000808 679 TFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 758 (1275)
Q Consensus 679 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 758 (1275)
+++|+++.+.. .+..+++|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~~-----------~~~~~l~~i~~~i~~G~~~~l~G~nGsGKstLl~~i~G~~~~--~~G~i~~~g~~~~~ 68 (171)
T cd03228 2 EFKNVSFSYPG-----------RPKPVLKDVSLTIKPGEKVAIVGPSGSGKSTLLKLLLRLYDP--TSGEILIDGVDLRD 68 (171)
T ss_pred EEEEEEEEcCC-----------CCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCC--CCCEEEECCEEhhh
Confidence 56777776531 112599999999999999999999999999999999998653 47999999987542
Q ss_pred ---ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHH
Q 000808 759 ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQR 835 (1275)
Q Consensus 759 ---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGer 835 (1275)
..+++.++|++|++.+++ .|+.||+ ||||||
T Consensus 69 ~~~~~~~~~i~~~~~~~~~~~-~t~~e~l---------------------------------------------LS~G~~ 102 (171)
T cd03228 69 LDLESLRKNIAYVPQDPFLFS-GTIRENI---------------------------------------------LSGGQR 102 (171)
T ss_pred cCHHHHHhhEEEEcCCchhcc-chHHHHh---------------------------------------------hCHHHH
Confidence 234567899999987765 5888776 899999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecC
Q 000808 836 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRG 906 (1275)
Q Consensus 836 qrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~g 906 (1275)
||++|||+|+.+|++++|||||+|||+.++..+.+.|+++.+ ++|||+++|++. ++.. +|++++|++|
T Consensus 103 ~rl~la~al~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~-~~tii~~sh~~~-~~~~-~d~~~~l~~g 170 (171)
T cd03228 103 QRIAIARALLRDPPILILDEATSALDPETEALILEALRALAK-GKTVIVIAHRLS-TIRD-ADRIIVLDDG 170 (171)
T ss_pred HHHHHHHHHhcCCCEEEEECCCcCCCHHHHHHHHHHHHHhcC-CCEEEEEecCHH-HHHh-CCEEEEEcCC
Confidence 999999999999999999999999999999999999999854 799999999986 4544 9999999863
No 390
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=99.98 E-value=2.8e-32 Score=311.37 Aligned_cols=190 Identities=25% Similarity=0.341 Sum_probs=159.8
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCc--cccceEEEeccccccCCCCCHHHHHHHHHhccCCC
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEF--VPQRTAAYISQHDVHIGEMTVRETLAFSARCQGVG 78 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~--~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~ 78 (1275)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.+||++|++.+++.+||.||+.+.+.+.+..
T Consensus 30 i~~l~G~NGaGKTTLl~~l~Gl~~~~---~G~i~i~g~~~~~~~~~~~~~ig~~~q~~~l~~~~tv~e~l~~~~~~~~~~ 106 (301)
T TIGR03522 30 IVGFLGPNGAGKSTTMKIITGYLPPD---SGSVQVCGEDVLQNPKEVQRNIGYLPEHNPLYLDMYVREYLQFIAGIYGMK 106 (301)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccChHHHHhceEEecCCCCCCCCCcHHHHHHHHHHHcCCC
Confidence 47999999999999999999999987 99999999887542 22467999999999999999999999876543210
Q ss_pred CcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhhHHHH
Q 000808 79 SRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEM 158 (1275)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~a 158 (1275)
. ++....++.+++.+||.+..++. ++.|||||||||+||+|
T Consensus 107 ~----------------------------------~~~~~~~~~~l~~~gl~~~~~~~-----~~~LS~G~~qrv~la~a 147 (301)
T TIGR03522 107 G----------------------------------QLLKQRVEEMIELVGLRPEQHKK-----IGQLSKGYRQRVGLAQA 147 (301)
T ss_pred H----------------------------------HHHHHHHHHHHHHCCCchHhcCc-----hhhCCHHHHHHHHHHHH
Confidence 0 00112346688999998766544 45799999999999999
Q ss_pred HhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhhHHH
Q 000808 159 MVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVLD 235 (1275)
Q Consensus 159 l~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~~~~ 235 (1275)
|+++|++++|||||+|||+.++.++++.++++. . +++|+.++|..+++.++||||++|++|++++.|+.+++..
T Consensus 148 l~~~p~lliLDEPt~gLD~~~~~~l~~~l~~~~-~--~~tiii~sH~l~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 221 (301)
T TIGR03522 148 LIHDPKVLILDEPTTGLDPNQLVEIRNVIKNIG-K--DKTIILSTHIMQEVEAICDRVIIINKGKIVADKKLDELSA 221 (301)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHhc-C--CCEEEEEcCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHH
Confidence 999999999999999999999999999999874 2 3567778999999999999999999999999999998764
No 391
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=99.98 E-value=2.3e-32 Score=316.24 Aligned_cols=192 Identities=25% Similarity=0.374 Sum_probs=151.6
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCc---cccceEEEeccccccCCCCCHHHHHHHHHhccCC
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEF---VPQRTAAYISQHDVHIGEMTVRETLAFSARCQGV 77 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~---~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~ 77 (1275)
.|+|+|+||||||||+++|+|+.+|+ +|+|.+||.+.++. .++++++||+|++.+|+ .|+||||.++..-..
T Consensus 349 ~talvG~SGaGKSTLl~lL~G~~~~~---~G~I~vng~~l~~l~~~~~~k~i~~v~Q~p~lf~-gTireNi~l~~~~~s- 423 (559)
T COG4988 349 LTALVGASGAGKSTLLNLLLGFLAPT---QGEIRVNGIDLRDLSPEAWRKQISWVSQNPYLFA-GTIRENILLARPDAS- 423 (559)
T ss_pred EEEEECCCCCCHHHHHHHHhCcCCCC---CceEEECCccccccCHHHHHhHeeeeCCCCcccc-ccHHHHhhccCCcCC-
Confidence 38999999999999999999999987 99999999987665 46789999999987765 599999998532100
Q ss_pred CCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhhHHH
Q 000808 78 GSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGE 157 (1275)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~ 157 (1275)
-.++.+..+. ..+.+.+.-+.+.||.+|+ ++++|||||+|||++||
T Consensus 424 ------~e~i~~al~~---------------------------a~l~~~v~~p~GLdt~ige-~G~~LSgGQ~QRlaLAR 469 (559)
T COG4988 424 ------DEEIIAALDQ---------------------------AGLLEFVPKPDGLDTVIGE-GGAGLSGGQAQRLALAR 469 (559)
T ss_pred ------HHHHHHHHHH---------------------------hcHHHhhcCCCcccchhcc-CCCCCCHHHHHHHHHHH
Confidence 0011110000 0122333336788999996 56689999999999999
Q ss_pred HHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhhHHH
Q 000808 158 MMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVLD 235 (1275)
Q Consensus 158 al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~~~~ 235 (1275)
|++++++++++||||++||.++++.|.+.|.+.++ ++|+++ ++|.. +....+|+|++|++|++++.|+++++.+
T Consensus 470 All~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~--~ktvl~-itHrl-~~~~~~D~I~vld~G~l~~~g~~~~L~~ 543 (559)
T COG4988 470 ALLSPASLLLLDEPTAHLDAETEQIILQALQELAK--QKTVLV-ITHRL-EDAADADRIVVLDNGRLVEQGTHEELSE 543 (559)
T ss_pred HhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHh--CCeEEE-EEcCh-HHHhcCCEEEEecCCceeccCCHHHHhh
Confidence 99999999999999999999999999999998764 345444 56655 4556679999999999999999999854
No 392
>TIGR01187 potA spermidine/putrescine ABC transporter ATP-binding subunit. This model describes spermidine/putrescine ABC transporter, ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Polyamines like spermidine and putrescine play vital role in cell proliferation, differentiation, and ion homeostasis. The concentration of polyamines within the cell are regulated by biosynthesis, degradation and transport (uptake and efflux included).
Probab=99.98 E-value=3.8e-32 Score=312.69 Aligned_cols=184 Identities=28% Similarity=0.390 Sum_probs=158.1
Q ss_pred EEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCCc-ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHH
Q 000808 721 LMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ-ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSE 799 (1275)
Q Consensus 721 i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~-~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~ 799 (1275)
|+|||||||||||++|+|..+ +.+|+|.++|.+... ...++.++|++|++.+++.+||+||+.|....+ .....
T Consensus 1 l~G~nGsGKSTLl~~iaGl~~--p~~G~I~i~g~~i~~~~~~~~~i~~v~q~~~l~~~~tv~enl~~~~~~~---~~~~~ 75 (325)
T TIGR01187 1 LLGPSGCGKTTLLRLLAGFEQ--PDSGSIMLDGEDVTNVPPHLRHINMVFQSYALFPHMTVEENVAFGLKMR---KVPRA 75 (325)
T ss_pred CcCCCCCCHHHHHHHHHCCCC--CCceEEEECCEECCCCCHHHCCEEEEecCccccCCCcHHHHHHHHHhhc---CCCHH
Confidence 689999999999999999876 348999999987643 223567999999999999999999999875432 12334
Q ss_pred HHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-
Q 000808 800 TQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT- 878 (1275)
Q Consensus 800 ~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~- 878 (1275)
+.+++++++++.++|.+..++.+ ..|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++.++
T Consensus 76 ~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgGq~qRvalaraL~~~p~lllLDEP~s~LD~~~~~~l~~~l~~l~~~~ 150 (325)
T TIGR01187 76 EIKPRVLEALRLVQLEEFADRKP-----HQLSGGQQQRVALARALVFKPKILLLDEPLSALDKKLRDQMQLELKTIQEQL 150 (325)
T ss_pred HHHHHHHHHHHHcCCcchhcCCh-----hhCCHHHHHHHHHHHHHHhCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhc
Confidence 45567889999999988777765 479999999999999999999999999999999999999999999998765
Q ss_pred CCEEEEEecCCCHHHHHhhhhhheeecCcEEEEECCCC
Q 000808 879 GRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVGPLG 916 (1275)
Q Consensus 879 g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~~ 916 (1275)
|+|||++||+++ ++...+|++++|++ |+++..|+++
T Consensus 151 g~tiiivTHd~~-e~~~~~d~i~vl~~-G~i~~~g~~~ 186 (325)
T TIGR01187 151 GITFVFVTHDQE-EAMTMSDRIAIMRK-GKIAQIGTPE 186 (325)
T ss_pred CCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEcCHH
Confidence 899999999985 67788999999986 7999999874
No 393
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=99.98 E-value=3.3e-32 Score=301.46 Aligned_cols=200 Identities=24% Similarity=0.317 Sum_probs=156.8
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCccc----cceEEEeccccccCCCCCHHHHHHHHHhccC
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFVP----QRTAAYISQHDVHIGEMTVRETLAFSARCQG 76 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~~~----~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~ 76 (1275)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||+||+.++.....
T Consensus 28 ~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv~~~l~~~~~~~~ 104 (236)
T cd03219 28 IHGLIGPNGAGKTTLFNLISGFLRPT---SGSVLFDGEDITGLPPHEIARLGIGRTFQIPRLFPELTVLENVMVAAQART 104 (236)
T ss_pred EEEEECCCCCCHHHHHHHHcCCCCCC---CceEEECCEECCCCCHHHHHhcCEEEEecccccccCCCHHHHHHHHHhhcc
Confidence 47999999999999999999999887 9999999988754321 3469999999999999999999998654221
Q ss_pred CCCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhhHH
Q 000808 77 VGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTG 156 (1275)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA 156 (1275)
.. .. ... . ... ...+....++++++.+||++..+ +.++.|||||||||+||
T Consensus 105 ~~-~~------~~~---~---~~~-----------~~~~~~~~~~~~l~~~~l~~~~~-----~~~~~LSgG~~qrv~la 155 (236)
T cd03219 105 GS-GL------LLA---R---ARR-----------EEREARERAEELLERVGLADLAD-----RPAGELSYGQQRRLEIA 155 (236)
T ss_pred cc-cc------ccc---c---ccc-----------cHHHHHHHHHHHHHHcCccchhh-----CChhhCCHHHHHHHHHH
Confidence 00 00 000 0 000 00011223567888999976544 34567999999999999
Q ss_pred HHHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhhHH
Q 000808 157 EMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVL 234 (1275)
Q Consensus 157 ~al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~~~ 234 (1275)
|||+.+|++++|||||+|||+.++.++.+.++++.+ . +.+|+.++|+.+++.+++|++++|++|++++.|+++++.
T Consensus 156 ~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 231 (236)
T cd03219 156 RALATDPKLLLLDEPAAGLNPEETEELAELIRELRE-R-GITVLLVEHDMDVVMSLADRVTVLDQGRVIAEGTPDEVR 231 (236)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-C-CCEEEEEecCHHHHHHhCCEEEEEeCCEEEeecCHHHhc
Confidence 999999999999999999999999999999998754 3 455666888888999999999999999999999887753
No 394
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.98 E-value=3.8e-32 Score=308.01 Aligned_cols=192 Identities=24% Similarity=0.356 Sum_probs=155.9
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCc-----cccceEEEeccccc-cCCCCCHHHHHHHHHhc
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEF-----VPQRTAAYISQHDV-HIGEMTVRETLAFSARC 74 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~-----~~~~~~~yv~Q~~~-~~~~lTv~e~l~f~~~~ 74 (1275)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.+|||+|++. .+...||+||+.|+...
T Consensus 35 ~~~i~G~nGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~ 111 (287)
T PRK13637 35 FVGLIGHTGSGKSTLIQHLNGLLKPT---SGKIIIDGVDITDKKVKLSDIRKKVGLVFQYPEYQLFEETIEKDIAFGPIN 111 (287)
T ss_pred EEEEECCCCCcHHHHHHHHhcCCCCC---ccEEEECCEECCCcCccHHHHhhceEEEecCchhccccccHHHHHHhHHHH
Confidence 47999999999999999999999987 99999999987542 22467999999853 34467999999986532
Q ss_pred cCCCCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCc--cccccccCCCccccccccccch
Q 000808 75 QGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLE--VCDDTLVGDEMVRGISGGQKKR 152 (1275)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~--~~~~t~vg~~~~~~LSGGqrqR 152 (1275)
.+.. .++....++++++.+||+ +.. ++.++.||||||||
T Consensus 112 ~~~~----------------------------------~~~~~~~~~~~l~~~gL~~~~~~-----~~~~~~LSgGq~qr 152 (287)
T PRK13637 112 LGLS----------------------------------EEEIENRVKRAMNIVGLDYEDYK-----DKSPFELSGGQKRR 152 (287)
T ss_pred CCCC----------------------------------HHHHHHHHHHHHHHcCCCchhhc-----cCCcccCCHHHHHH
Confidence 2110 001122356788999996 333 35567899999999
Q ss_pred hhHHHHHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhh
Q 000808 153 VTTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPREL 232 (1275)
Q Consensus 153 vsiA~al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~ 232 (1275)
++|||||+.+|++|+|||||+|||+.++.++.+.++++.+. .+++|++++|+.+++..+||||++|++|++++.|++++
T Consensus 153 v~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~-~g~tvi~vtHd~~~~~~~~drv~~l~~G~i~~~g~~~~ 231 (287)
T PRK13637 153 VAIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKE-YNMTIILVSHSMEDVAKLADRIIVMNKGKCELQGTPRE 231 (287)
T ss_pred HHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHH
Confidence 99999999999999999999999999999999999987653 35666778898889999999999999999999999988
Q ss_pred HHH
Q 000808 233 VLD 235 (1275)
Q Consensus 233 ~~~ 235 (1275)
+.+
T Consensus 232 ~~~ 234 (287)
T PRK13637 232 VFK 234 (287)
T ss_pred HHh
Confidence 743
No 395
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=99.98 E-value=4.3e-32 Score=313.93 Aligned_cols=191 Identities=24% Similarity=0.293 Sum_probs=158.0
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCc----cCCCcc------c-cceEEEeccccccCCCCCHHHHHH
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGH----GMDEFV------P-QRTAAYISQHDVHIGEMTVRETLA 69 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~----~~~~~~------~-~~~~~yv~Q~~~~~~~lTv~e~l~ 69 (1275)
+++|+||||||||||+++|+|+++|+ +|+|.++|+ ++.... . ++.++||+|++.+++.+||+||+.
T Consensus 52 i~~I~G~nGsGKSTLlr~L~Gl~~p~---~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vfQ~~~l~p~~Tv~eNi~ 128 (382)
T TIGR03415 52 ICVLMGLSGSGKSSLLRAVNGLNPVS---RGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVFQKFALMPWLTVEENVA 128 (382)
T ss_pred EEEEECCCCCcHHHHHHHHhCCCCCC---CcEEEECCEecccccccCCHHHHHHHhcCCEEEEECCCcCCCCCcHHHHHH
Confidence 47999999999999999999999987 999999996 332221 1 247999999999999999999999
Q ss_pred HHHhccCCCCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccc
Q 000808 70 FSARCQGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQ 149 (1275)
Q Consensus 70 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGq 149 (1275)
++....+... .+....++++++.+||++..+. .+..|||||
T Consensus 129 ~~~~~~g~~~----------------------------------~~~~~~a~e~le~vgL~~~~~~-----~~~~LSgGq 169 (382)
T TIGR03415 129 FGLEMQGMPE----------------------------------AERRKRVDEQLELVGLAQWADK-----KPGELSGGM 169 (382)
T ss_pred HHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhcC-----ChhhCCHHH
Confidence 9765332100 0111235678899999766554 455799999
Q ss_pred cchhhHHHHHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecC
Q 000808 150 KKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGP 229 (1275)
Q Consensus 150 rqRvsiA~al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~ 229 (1275)
||||+|||||+.+|+||||||||+|||+.++.++.+.|+++.+.. +++|++++|+.+++.+++|+|++|++|+++..|+
T Consensus 170 ~QRV~LARALa~~P~ILLlDEPts~LD~~~r~~l~~~L~~l~~~~-~~TII~iTHdl~e~~~l~DrI~vl~~G~iv~~g~ 248 (382)
T TIGR03415 170 QQRVGLARAFAMDADILLMDEPFSALDPLIRTQLQDELLELQAKL-NKTIIFVSHDLDEALKIGNRIAIMEGGRIIQHGT 248 (382)
T ss_pred HHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecC
Confidence 999999999999999999999999999999999999999876533 4566668999999999999999999999999999
Q ss_pred hhhHH
Q 000808 230 RELVL 234 (1275)
Q Consensus 230 ~~~~~ 234 (1275)
++++.
T Consensus 249 ~~ei~ 253 (382)
T TIGR03415 249 PEEIV 253 (382)
T ss_pred HHHHh
Confidence 98875
No 396
>cd03237 ABC_RNaseL_inhibitor_domain2 The ATPase domain 2 of RNase L inhibitor. The ABC ATPase, RNase L inhibitor (RLI), is a key enzyme in ribosomal biogenesis, formation of translation preinitiation complexes, and assembly of HIV capsids. RLI's are not transport proteins and thus cluster with a group of soluble proteins that lack the transmembrane components commonly found in other members of the family. Structurally, RLI's have an N-terminal Fe-S domain and two nucleotide-binding domains which are arranged to form two composite active sites in their interface cleft. RLI is one of the most conserved enzymes between archaea and eukaryotes with a sequence identity of more than 48%. The high degree of evolutionary conservation suggests that RLI performs a central role in archaeal and eukaryotic physiology.
Probab=99.98 E-value=1.1e-31 Score=296.17 Aligned_cols=200 Identities=21% Similarity=0.236 Sum_probs=157.7
Q ss_pred eeeceEEEEe-----CCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCCcccccceEEEeccCCCCCCCCC
Q 000808 705 LLNGVSGAFR-----PGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQETFTRISGYCEQNDIHSPFVT 779 (1275)
Q Consensus 705 iL~~vs~~i~-----~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~~~~~~~~~~v~q~~~~~~~lt 779 (1275)
.++|++++++ +||+++|+||||||||||+++|+|..+ +.+|+|.++|. .++|++|+....+.+|
T Consensus 9 ~~~~~~l~~~~~~i~~Ge~~~i~G~NGsGKSTLlk~L~G~~~--p~~G~i~~~g~---------~i~~~~q~~~~~~~~t 77 (246)
T cd03237 9 TLGEFTLEVEGGSISESEVIGILGPNGIGKTTFIKMLAGVLK--PDEGDIEIELD---------TVSYKPQYIKADYEGT 77 (246)
T ss_pred ccCcEEEEEecCCcCCCCEEEEECCCCCCHHHHHHHHhCCCc--CCCCeEEECCc---------eEEEecccccCCCCCC
Confidence 5666666665 799999999999999999999999865 34799999874 4799999987777899
Q ss_pred HHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCC
Q 000808 780 VYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 859 (1275)
Q Consensus 780 v~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsg 859 (1275)
|+|++.+...... . .....+++++.+++.+..++.+ ..||||||||++||++|+.+|++++|||||++
T Consensus 78 v~e~l~~~~~~~~----~---~~~~~~~~l~~l~l~~~~~~~~-----~~LSgGe~qrv~iaraL~~~p~llllDEPt~~ 145 (246)
T cd03237 78 VRDLLSSITKDFY----T---HPYFKTEIAKPLQIEQILDREV-----PELSGGELQRVAIAACLSKDADIYLLDEPSAY 145 (246)
T ss_pred HHHHHHHHhhhcc----c---cHHHHHHHHHHcCCHHHhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCccc
Confidence 9999875432110 0 1123578899999987777665 46999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhhhhheeecCcEEE--EECCCCccchHHHHHHhcC
Q 000808 860 LDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDELFLMKRGGQEI--YVGPLGRHSCHLIRYFEGI 929 (1275)
Q Consensus 860 LD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~--~~g~~~~~~~~~~~~f~~~ 929 (1275)
||+.++..+.+.|++++++ |+|||+++|++. .+...+|++++|.+ +..+ ..+++......+..|++..
T Consensus 146 LD~~~~~~l~~~l~~~~~~~~~tiiivsHd~~-~~~~~~d~i~~l~~-~~~~~~~~~~~~~~~~~~~~~l~~~ 216 (246)
T cd03237 146 LDVEQRLMASKVIRRFAENNEKTAFVVEHDII-MIDYLADRLIVFEG-EPSVNGVANPPQSLRSGMNRFLKNL 216 (246)
T ss_pred CCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEcC-CCeeEEEeCCchHHHHHHHHHHHHC
Confidence 9999999999999998754 899999999975 46668999999974 3222 3444443333455566544
No 397
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=99.98 E-value=2.4e-32 Score=298.18 Aligned_cols=180 Identities=24% Similarity=0.341 Sum_probs=147.1
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCcc------ccceEEEeccccccCCCCCHHHHHHHHHhc
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV------PQRTAAYISQHDVHIGEMTVRETLAFSARC 74 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~~------~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~ 74 (1275)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+||.||+.++...
T Consensus 31 ~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~ 107 (216)
T TIGR00960 31 MVFLVGHSGAGKSTFLKLILGIEKPT---RGKIRFNGQDLTRLRGREIPFLRRHIGMVFQDHRLLSDRTVYDNVAFPLRI 107 (216)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEehhhcChhHHHHHHHhceEEecCccccccccHHHHHHHHHHh
Confidence 47999999999999999999999887 999999998774321 245799999999889999999999986543
Q ss_pred cCCCCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhh
Q 000808 75 QGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVT 154 (1275)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvs 154 (1275)
.+.. . ++....++++++.+||++..+. .+.+|||||||||+
T Consensus 108 ~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~-----~~~~LSgG~~qrv~ 148 (216)
T TIGR00960 108 IGVP----------P------------------------RDANERVSAALEKVGLEGKAHA-----LPMQLSGGEQQRVA 148 (216)
T ss_pred cCCC----------H------------------------HHHHHHHHHHHHHcCChhhhhC-----ChhhCCHHHHHHHH
Confidence 2110 0 0011234667888999765544 44579999999999
Q ss_pred HHHHHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeE
Q 000808 155 TGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQI 224 (1275)
Q Consensus 155 iA~al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i 224 (1275)
|||||+.+|++++|||||+|||+.++.++.+.++++.+ . +.+|++++|+.+++..+||++++|++|++
T Consensus 149 laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tii~vsH~~~~~~~~~d~i~~l~~G~i 216 (216)
T TIGR00960 149 IARAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNR-R-GTTVLVATHDINLVETYRHRTLTLSRGRL 216 (216)
T ss_pred HHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999999999999998754 3 45566688888899999999999999975
No 398
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=99.98 E-value=4.8e-32 Score=299.33 Aligned_cols=189 Identities=21% Similarity=0.349 Sum_probs=154.7
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCcc----ccceEEEeccccccCCCCCHHHHHHHHHhccC
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV----PQRTAAYISQHDVHIGEMTVRETLAFSARCQG 76 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~~----~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~ 76 (1275)
+++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+||+||+.+.....+
T Consensus 28 ~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~ 104 (232)
T cd03218 28 IVGLLGPNGAGKTTTFYMIVGLVKPD---SGKILLDGQDITKLPMHKRARLGIGYLPQEASIFRKLTVEENILAVLEIRG 104 (232)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEecccCCHhHHHhccEEEecCCccccccCcHHHHHHHHHHhcC
Confidence 47999999999999999999999887 999999998765432 12469999999999999999999988643221
Q ss_pred CCCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhhHH
Q 000808 77 VGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTG 156 (1275)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA 156 (1275)
.. . .+....++.+++.+||++..++ .++.|||||||||+||
T Consensus 105 ~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~-----~~~~LS~G~~qrl~la 145 (232)
T cd03218 105 LS----------K------------------------KEREEKLEELLEEFHITHLRKS-----KASSLSGGERRRVEIA 145 (232)
T ss_pred CC----------H------------------------HHHHHHHHHHHHHcCChhhhhC-----ChhhCCHHHHHHHHHH
Confidence 00 0 0011234667888898765544 4567999999999999
Q ss_pred HHHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhhH
Q 000808 157 EMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELV 233 (1275)
Q Consensus 157 ~al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~~ 233 (1275)
||++.+|++++|||||+|||+.++.++.+.+++..+ . +.+|++++|+.+++.+++|++++|++|++++.|+.+++
T Consensus 146 ~al~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~-~-~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 220 (232)
T cd03218 146 RALATNPKFLLLDEPFAGVDPIAVQDIQKIIKILKD-R-GIGVLITDHNVRETLSITDRAYIIYEGKVLAEGTPEEI 220 (232)
T ss_pred HHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEEECCeEEEEeCHHHh
Confidence 999999999999999999999999999999998754 2 45566688888899999999999999999999987765
No 399
>COG4674 Uncharacterized ABC-type transport system, ATPase component [General function prediction only]
Probab=99.98 E-value=1.8e-32 Score=270.62 Aligned_cols=218 Identities=24% Similarity=0.312 Sum_probs=181.9
Q ss_pred cEEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcC-c
Q 000808 676 HSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISG-Y 754 (1275)
Q Consensus 676 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g-~ 754 (1275)
..+..+|++.+.+ ...+|+|+||++.|||+-+|+|||||||||++++|+|...+ ..|++.++| .
T Consensus 4 ~iL~~~~vsVsF~-------------GF~Aln~ls~~v~~Gelr~lIGpNGAGKTT~mD~ItGKtrp--~~G~v~f~g~~ 68 (249)
T COG4674 4 IILYLDGVSVSFG-------------GFKALNDLSFSVDPGELRVLIGPNGAGKTTLMDVITGKTRP--QEGEVLFDGDT 68 (249)
T ss_pred ceEEEeceEEEEc-------------ceeeeeeeEEEecCCeEEEEECCCCCCceeeeeeecccCCC--CcceEEEcCch
Confidence 3577888887763 46799999999999999999999999999999999997653 479999999 5
Q ss_pred cCCcc----cccceEEEeccCCCCCCCCCHHHHHHHHHhccCCC-----CCCHHHHHHHHHHHHHHcCCCccccccccCC
Q 000808 755 PKKQE----TFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPP-----EVDSETQKMFIEEIMELVELNPLRQSLVGLP 825 (1275)
Q Consensus 755 ~~~~~----~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~-----~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~ 825 (1275)
++... ..+.-+|--+|.|..|+.+||+|||..+..-..+- .....+.+++++++|+..||.+.++...+
T Consensus 69 dl~~~~e~~IAr~GIGRKFQ~PtVfe~ltV~eNLelA~~~~k~v~a~L~~r~~~~e~~ride~La~igL~~~~~~~A~-- 146 (249)
T COG4674 69 DLTKLPEHRIARAGIGRKFQKPTVFENLTVRENLELALNRDKSVFASLFARLRAEERRRIDELLATIGLGDERDRLAA-- 146 (249)
T ss_pred hhccCCHHHHHHhccCccccCCeehhhccHHHHHHHHhcCCcchHHHhhhhcChhHHHHHHHHHHHcccchhhhhhhh--
Confidence 55431 22445788899999999999999999874321110 01122345679999999999999988865
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeec
Q 000808 826 GESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKR 905 (1275)
Q Consensus 826 ~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~ 905 (1275)
.||.||||++.|++.++++|++|+||||++|+-.+.....-++|+.++. +++|+++-||.. -+-+++|+|.+|++
T Consensus 147 ---~LSHGqKQwLEIGMll~Q~P~lLLlDEPvAGMTd~Et~~taeLl~~la~-~hsilVVEHDM~-Fvr~~A~~VTVlh~ 221 (249)
T COG4674 147 ---LLSHGQKQWLEIGMLLAQDPKLLLLDEPVAGMTDAETEKTAELLKSLAG-KHSILVVEHDMG-FVREIADKVTVLHE 221 (249)
T ss_pred ---hhccchhhhhhhheeeccCCcEEEecCccCCCcHHHHHHHHHHHHHHhc-CceEEEEeccHH-HHHHhhheeEEEec
Confidence 5999999999999999999999999999999999999999999999975 689999999976 46678999999997
Q ss_pred CcEEEEECCCC
Q 000808 906 GGQEIYVGPLG 916 (1275)
Q Consensus 906 gg~~~~~g~~~ 916 (1275)
|.+...|+.+
T Consensus 222 -G~VL~EGsld 231 (249)
T COG4674 222 -GSVLAEGSLD 231 (249)
T ss_pred -cceeecccHH
Confidence 7999999864
No 400
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.98 E-value=4.6e-32 Score=299.55 Aligned_cols=191 Identities=25% Similarity=0.336 Sum_probs=156.1
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCcc------ccceEEEeccccccCCCCCHHHHHHHHHhc
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV------PQRTAAYISQHDVHIGEMTVRETLAFSARC 74 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~~------~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~ 74 (1275)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|++||+.+....
T Consensus 33 ~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~ 109 (233)
T cd03258 33 IFGIIGRSGAGKSTLIRCINGLERPT---SGSVLVDGTDLTLLSGKELRKARRRIGMIFQHFNLLSSRTVFENVALPLEI 109 (233)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcccCCHHHHHHHHhheEEEccCcccCCCCcHHHHHHHHHHH
Confidence 47999999999999999999999987 999999999875421 145799999999999999999999886542
Q ss_pred cCCCCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhh
Q 000808 75 QGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVT 154 (1275)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvs 154 (1275)
.+.. . .+....++++++.+||++..+. .+..|||||||||+
T Consensus 110 ~~~~-------~---------------------------~~~~~~~~~~l~~~~l~~~~~~-----~~~~LS~G~~qrv~ 150 (233)
T cd03258 110 AGVP-------K---------------------------AEIEERVLELLELVGLEDKADA-----YPAQLSGGQKQRVG 150 (233)
T ss_pred cCCC-------H---------------------------HHHHHHHHHHHHHCCChhhhhc-----ChhhCCHHHHHHHH
Confidence 2100 0 0011134567888999765543 45679999999999
Q ss_pred HHHHHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhhHH
Q 000808 155 TGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVL 234 (1275)
Q Consensus 155 iA~al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~~~ 234 (1275)
||||++.+|++++|||||+|||+.++..+.+.++++.+. ++++|++++|+.+++.+++|++++|++|++++.|+++++.
T Consensus 151 la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~-~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 229 (233)
T cd03258 151 IARALANNPKVLLCDEATSALDPETTQSILALLRDINRE-LGLTIVLITHEMEVVKRICDRVAVMEKGEVVEEGTVEEVF 229 (233)
T ss_pred HHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHh
Confidence 999999999999999999999999999999999987543 2456666788888899999999999999999999877653
No 401
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.98 E-value=5.8e-32 Score=295.86 Aligned_cols=185 Identities=27% Similarity=0.367 Sum_probs=151.5
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCccccceEEEeccccccCCCCCHHHHHHHHHhccCCCCc
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFVPQRTAAYISQHDVHIGEMTVRETLAFSARCQGVGSR 80 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~ 80 (1275)
+++|+||||||||||+++|+|..+|+ +|+|.++|+++.. .++.++|++|++.+++.+||+||+.++....+..
T Consensus 32 ~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~--~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~-- 104 (220)
T cd03293 32 FVALVGPSGCGKSTLLRIIAGLERPT---SGEVLVDGEPVTG--PGPDRGYVFQQDALLPWLTVLDNVALGLELQGVP-- 104 (220)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECcc--ccCcEEEEecccccccCCCHHHHHHHHHHHcCCC--
Confidence 47999999999999999999999887 9999999987753 3467999999988888899999999865432110
Q ss_pred chhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhhHHHHHh
Q 000808 81 YDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEMMV 160 (1275)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~al~ 160 (1275)
. .+....++.+++.+||++..+. .+..||||||||++|||||+
T Consensus 105 -----~---------------------------~~~~~~~~~~l~~~~l~~~~~~-----~~~~LSgG~~qrl~la~al~ 147 (220)
T cd03293 105 -----K---------------------------AEARERAEELLELVGLSGFENA-----YPHQLSGGMRQRVALARALA 147 (220)
T ss_pred -----H---------------------------HHHHHHHHHHHHHcCChhhhhC-----CcccCCHHHHHHHHHHHHHH
Confidence 0 0011234667888999765544 34579999999999999999
Q ss_pred cCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEec--CCeEEEecCh
Q 000808 161 GPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLS--DAQIVYQGPR 230 (1275)
Q Consensus 161 ~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~--~G~i~~~G~~ 230 (1275)
.+|++++|||||+|||+.++..+.+.+++..+.. +++|++++|+.+++.+.+|++++|+ +|++++.++.
T Consensus 148 ~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~-~~tiii~sH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 148 VDPDVLLLDEPFSALDALTREQLQEELLDIWRET-GKTVLLVTHDIDEAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred cCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHc-CCEEEEEecCHHHHHHhCCEEEEEECCCCEEEEEEEe
Confidence 9999999999999999999999999999875433 4556667888888999999999999 7999988764
No 402
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=99.98 E-value=5.1e-32 Score=314.83 Aligned_cols=185 Identities=24% Similarity=0.360 Sum_probs=156.6
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCc-------cccceEEEeccccccCCCCCHHHHHHHHHh
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEF-------VPQRTAAYISQHDVHIGEMTVRETLAFSAR 73 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~-------~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~ 73 (1275)
+++|+|||||||||||++|+|.++|+ +|+|.++|+++... ..++.++|++|++.+++.+||+||+.|+.+
T Consensus 26 ~~~l~G~nGsGKSTLl~~iaGl~~p~---~G~I~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv~enl~~~~~ 102 (352)
T PRK11144 26 ITAIFGRSGAGKTSLINAISGLTRPQ---KGRIVLNGRVLFDAEKGICLPPEKRRIGYVFQDARLFPHYKVRGNLRYGMA 102 (352)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccccchhhCCEEEEcCCcccCCCCcHHHHHHhhhh
Confidence 47999999999999999999999987 99999999886431 224679999999999999999999988532
Q ss_pred ccCCCCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchh
Q 000808 74 CQGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRV 153 (1275)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv 153 (1275)
. . ....++++++.+||++..+ +.+++|||||||||
T Consensus 103 ~-----------~-----------------------------~~~~~~~~l~~~gl~~~~~-----~~~~~LSgGq~qRv 137 (352)
T PRK11144 103 K-----------S-----------------------------MVAQFDKIVALLGIEPLLD-----RYPGSLSGGEKQRV 137 (352)
T ss_pred h-----------h-----------------------------hHHHHHHHHHHcCCchhhh-----CCcccCCHHHHHHH
Confidence 0 0 0112456788899976554 44568999999999
Q ss_pred hHHHHHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhhH
Q 000808 154 TTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELV 233 (1275)
Q Consensus 154 siA~al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~~ 233 (1275)
+|||||+.+|++++|||||+|||+.++..+.+.|+++.+.. +.+++.++|+.+++..++|++++|++|+++..|+++++
T Consensus 138 alaraL~~~p~llLLDEPts~LD~~~~~~l~~~L~~l~~~~-g~tii~vTHd~~~~~~~~d~i~~l~~G~i~~~g~~~~i 216 (352)
T PRK11144 138 AIGRALLTAPELLLMDEPLASLDLPRKRELLPYLERLAREI-NIPILYVSHSLDEILRLADRVVVLEQGKVKAFGPLEEV 216 (352)
T ss_pred HHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhc-CCeEEEEecCHHHHHHhCCEEEEEeCCEEEEecCHHHH
Confidence 99999999999999999999999999999999999876533 45566688988999999999999999999999999887
Q ss_pred H
Q 000808 234 L 234 (1275)
Q Consensus 234 ~ 234 (1275)
.
T Consensus 217 ~ 217 (352)
T PRK11144 217 W 217 (352)
T ss_pred H
Confidence 5
No 403
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.98 E-value=4.5e-32 Score=294.61 Aligned_cols=183 Identities=26% Similarity=0.367 Sum_probs=150.7
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCccccceEEEeccccccCCCCCHHHHHHHHHhccCCCCc
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFVPQRTAAYISQHDVHIGEMTVRETLAFSARCQGVGSR 80 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~ 80 (1275)
+++|+||||||||||+++|+|.++|+ +|+|.++|+++.. ..++.++|++|++.+++.+||+||+.+.....+...
T Consensus 28 ~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~-~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~- 102 (210)
T cd03269 28 IFGLLGPNGAGKTTTIRMILGIILPD---SGEVLFDGKPLDI-AARNRIGYLPEERGLYPKMKVIDQLVYLAQLKGLKK- 102 (210)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCCchhH-HHHccEEEeccCCcCCcCCcHHHHHHHHHHHcCCCh-
Confidence 47999999999999999999999887 9999999987653 335679999999988888999999988654321100
Q ss_pred chhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhhHHHHHh
Q 000808 81 YDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEMMV 160 (1275)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~al~ 160 (1275)
.+....++++++.+||++..++ .+++|||||||||+||+|++
T Consensus 103 ---------------------------------~~~~~~~~~~l~~~~l~~~~~~-----~~~~LS~G~~qrl~la~al~ 144 (210)
T cd03269 103 ---------------------------------EEARRRIDEWLERLELSEYANK-----RVEELSKGNQQKVQFIAAVI 144 (210)
T ss_pred ---------------------------------HHHHHHHHHHHHHcCChHHHhC-----cHhhCCHHHHHHHHHHHHHh
Confidence 0011235667888999765554 35579999999999999999
Q ss_pred cCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEec
Q 000808 161 GPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQG 228 (1275)
Q Consensus 161 ~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G 228 (1275)
.+|++++|||||+|||+.++..+.+.++++.+ . +.+|++++|+.+++.+++|++++|++|++++.|
T Consensus 145 ~~p~~lllDEP~~~LD~~~~~~~~~~l~~~~~-~-~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~ 210 (210)
T cd03269 145 HDPELLILDEPFSGLDPVNVELLKDVIRELAR-A-GKTVILSTHQMELVEELCDRVLLLNKGRAVLYG 210 (210)
T ss_pred cCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHH-C-CCEEEEECCCHHHHHHhhhEEEEEeCCEEEecC
Confidence 99999999999999999999999999998754 2 456666888888999999999999999998764
No 404
>cd03291 ABCC_CFTR1 The CFTR subfamily domain 1. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits, or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=99.98 E-value=3.2e-31 Score=297.44 Aligned_cols=201 Identities=19% Similarity=0.334 Sum_probs=157.2
Q ss_pred CCCCcEEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEE
Q 000808 672 PFEPHSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITI 751 (1275)
Q Consensus 672 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~ 751 (1275)
+..+..++++|+++. . +.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.+
T Consensus 34 ~~~~~~l~i~nls~~-~--------------~~vL~~vs~~i~~Ge~~~liG~NGsGKSTLl~~I~Gl~~p--~~G~I~i 96 (282)
T cd03291 34 SSDDNNLFFSNLCLV-G--------------APVLKNINLKIEKGEMLAITGSTGSGKTSLLMLILGELEP--SEGKIKH 96 (282)
T ss_pred CCCCCeEEEEEEEEe-c--------------ccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEE
Confidence 334567999999874 1 2599999999999999999999999999999999998763 4799999
Q ss_pred cCccCCcccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCcccc-------ccccC
Q 000808 752 SGYPKKQETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQ-------SLVGL 824 (1275)
Q Consensus 752 ~g~~~~~~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~-------~~~~~ 824 (1275)
+| .++|++|++.+++. |++||+.+.... ... .+.+.++.+++.+..+ +.++.
T Consensus 97 ~g----------~i~yv~q~~~l~~~-tv~enl~~~~~~------~~~----~~~~~l~~~~l~~~l~~~~~~~~~~~~~ 155 (282)
T cd03291 97 SG----------RISFSSQFSWIMPG-TIKENIIFGVSY------DEY----RYKSVVKACQLEEDITKFPEKDNTVLGE 155 (282)
T ss_pred CC----------EEEEEeCccccccc-CHHHHhhccccc------CHH----HHHHHHHHhCCHHHHHhccccccceecC
Confidence 87 27999999888774 999999764211 111 1233444444433221 12211
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHH-HHHhhCCCEEEEEecCCCHHHHHhhhhhhee
Q 000808 825 PGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTV-RNTVDTGRTVVCTIHQPSIDIFESFDELFLM 903 (1275)
Q Consensus 825 ~~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l-~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l 903 (1275)
....||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.+ +++. ++.|||+++|+++. ...+|++++|
T Consensus 156 -~~~~LSgGq~qrv~lAraL~~~p~iLiLDEPt~gLD~~~~~~l~~~ll~~~~-~~~tIiiisH~~~~--~~~~d~i~~l 231 (282)
T cd03291 156 -GGITLSGGQRARISLARAVYKDADLYLLDSPFGYLDVFTEKEIFESCVCKLM-ANKTRILVTSKMEH--LKKADKILIL 231 (282)
T ss_pred -CCCcCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHhh-CCCEEEEEeCChHH--HHhCCEEEEE
Confidence 23579999999999999999999999999999999999999998865 4554 47999999999863 3679999999
Q ss_pred ecCcEEEEECCC
Q 000808 904 KRGGQEIYVGPL 915 (1275)
Q Consensus 904 ~~gg~~~~~g~~ 915 (1275)
++ |++++.|+.
T Consensus 232 ~~-G~i~~~g~~ 242 (282)
T cd03291 232 HE-GSSYFYGTF 242 (282)
T ss_pred EC-CEEEEECCH
Confidence 86 789999986
No 405
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.98 E-value=2.9e-32 Score=309.25 Aligned_cols=191 Identities=26% Similarity=0.373 Sum_probs=151.8
Q ss_pred EEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCcc---ccceEEEeccccccCCCCCHHHHHHHHHhccCCC
Q 000808 2 TLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV---PQRTAAYISQHDVHIGEMTVRETLAFSARCQGVG 78 (1275)
Q Consensus 2 ~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~~---~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~ 78 (1275)
+||+|+|||||||++++|.+..+ . +|+|.+||.++.+.. .|+.||||||+..+| +.||.+||.++..-.
T Consensus 381 VaIvG~nGsGKSTilr~LlrF~d-~---sG~I~IdG~dik~~~~~SlR~~Ig~VPQd~~LF-ndTIl~NI~YGn~sa--- 452 (591)
T KOG0057|consen 381 VAIVGSNGSGKSTILRLLLRFFD-Y---SGSILIDGQDIKEVSLESLRQSIGVVPQDSVLF-NDTILYNIKYGNPSA--- 452 (591)
T ss_pred EEEECCCCCCHHHHHHHHHHHhc-c---CCcEEECCeeHhhhChHHhhhheeEeCCccccc-chhHHHHhhcCCCCc---
Confidence 69999999999999999999988 3 899999999986654 467899999987766 559999999964311
Q ss_pred CcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhhHHHH
Q 000808 79 SRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEM 158 (1275)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~a 158 (1275)
..+.+.+. .+..++ .+. ...|+++.+|.||+++. .|||||||||+||||
T Consensus 453 -s~eeV~e~---~k~a~~------------------------hd~--i~~l~~GY~T~VGerG~-~LSGGekQrvslaRa 501 (591)
T KOG0057|consen 453 -SDEEVVEA---CKRAGL------------------------HDV--ISRLPDGYQTLVGERGL-MLSGGEKQRVSLARA 501 (591)
T ss_pred -CHHHHHHH---HHHcCc------------------------HHH--HHhccccchhhHhhccc-ccccchHHHHHHHHH
Confidence 11111111 111111 111 23489999999997654 699999999999999
Q ss_pred HhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhhHHH
Q 000808 159 MVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVLD 235 (1275)
Q Consensus 159 l~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~~~~ 235 (1275)
++.+|+|+++|||||+||+++..++++.+.+. ..++| ++.+.|+. ...+.||+|++|++|++.+.|++++++.
T Consensus 502 ~lKda~Il~~DEaTS~LD~~TE~~i~~~i~~~--~~~rT-vI~IvH~l-~ll~~~DkI~~l~nG~v~e~gth~ell~ 574 (591)
T KOG0057|consen 502 FLKDAPILLLDEATSALDSETEREILDMIMDV--MSGRT-VIMIVHRL-DLLKDFDKIIVLDNGTVKEYGTHSELLA 574 (591)
T ss_pred HhcCCCeEEecCcccccchhhHHHHHHHHHHh--cCCCe-EEEEEecc-hhHhcCCEEEEEECCeeEEeccHHHHhh
Confidence 99999999999999999999999999999883 23444 44466665 4677899999999999999999999875
No 406
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.98 E-value=4.8e-32 Score=294.58 Aligned_cols=183 Identities=27% Similarity=0.388 Sum_probs=150.5
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCc--cccceEEEeccccccCCCCCHHHHHHHHHhccCCC
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEF--VPQRTAAYISQHDVHIGEMTVRETLAFSARCQGVG 78 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~--~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~ 78 (1275)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++|++|++.+++.+||+||+.+.....+..
T Consensus 27 ~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~ 103 (211)
T cd03264 27 MYGLLGPNGAGKTTLMRILATLTPPS---SGTIRIDGQDVLKQPQKLRRRIGYLPQEFGVYPNFTVREFLDYIAWLKGIP 103 (211)
T ss_pred cEEEECCCCCCHHHHHHHHhCCCCCC---ccEEEECCCccccchHHHHhheEEecCCCcccccCCHHHHHHHHHHHhCCC
Confidence 47999999999999999999999887 99999999876532 22467999999999999999999999865432110
Q ss_pred CcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhhHHHH
Q 000808 79 SRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEM 158 (1275)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~a 158 (1275)
. .+....++.+++.+||++..++. +..|||||||||+||||
T Consensus 104 ----------~------------------------~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~la~a 144 (211)
T cd03264 104 ----------S------------------------KEVKARVDEVLELVNLGDRAKKK-----IGSLSGGMRRRVGIAQA 144 (211)
T ss_pred ----------H------------------------HHHHHHHHHHHHHCCCHHHHhCc-----hhhCCHHHHHHHHHHHH
Confidence 0 00112346678888997655544 45799999999999999
Q ss_pred HhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEec
Q 000808 159 MVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQG 228 (1275)
Q Consensus 159 l~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G 228 (1275)
|+.+|++++|||||+|||+.++.++.+.+++.++ + .++++++|+.+++.+++|++++|++|++++.|
T Consensus 145 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~vsH~~~~~~~~~d~i~~l~~g~i~~~g 211 (211)
T cd03264 145 LVGDPSILIVDEPTAGLDPEERIRFRNLLSELGE--D-RIVILSTHIVEDVESLCNQVAVLNKGKLVFEG 211 (211)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC--C-CEEEEEcCCHHHHHHhCCEEEEEECCEEEecC
Confidence 9999999999999999999999999999998753 3 56666889888999999999999999998765
No 407
>PRK10522 multidrug transporter membrane component/ATP-binding component; Provisional
Probab=99.98 E-value=7.6e-32 Score=334.37 Aligned_cols=207 Identities=21% Similarity=0.280 Sum_probs=166.8
Q ss_pred cEEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCcc
Q 000808 676 HSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 755 (1275)
Q Consensus 676 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~ 755 (1275)
..++++|++++++ +++++|+|+|++++|||++||+||||||||||+++|+|..+ +.+|+|.+||.+
T Consensus 321 ~~i~~~~v~f~y~------------~~~~~l~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~--~~~G~i~~~g~~ 386 (547)
T PRK10522 321 QTLELRNVTFAYQ------------DNGFSVGPINLTIKRGELLFLIGGNGSGKSTLAMLLTGLYQ--PQSGEILLDGKP 386 (547)
T ss_pred ceEEEEEEEEEeC------------CCCeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEE
Confidence 4699999999984 12359999999999999999999999999999999999876 358999999998
Q ss_pred CCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCH
Q 000808 756 KKQ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLST 832 (1275)
Q Consensus 756 ~~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSg 832 (1275)
... ..+++.++|++|++.+++ .|++|| . .. ..++.+++.++.+++.+..+...|.....+|||
T Consensus 387 ~~~~~~~~~~~~i~~v~q~~~lf~-~ti~~n---~------~~----~~~~~~~~~~~~~~l~~~~~~~~~~~~G~~LSg 452 (547)
T PRK10522 387 VTAEQPEDYRKLFSAVFTDFHLFD-QLLGPE---G------KP----ANPALVEKWLERLKMAHKLELEDGRISNLKLSK 452 (547)
T ss_pred CCCCCHHHHhhheEEEecChhHHH-Hhhccc---c------Cc----hHHHHHHHHHHHcCCchhhhccccCCCCCCCCH
Confidence 753 345678999999987765 466665 0 11 223456788888888764432111111357999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhh-CCCEEEEEecCCCHHHHHhhhhhheeecCcEEEE
Q 000808 833 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFESFDELFLMKRGGQEIY 911 (1275)
Q Consensus 833 Gerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~ 911 (1275)
|||||++|||||+++|++|+||||||+||++++..+.+.+.+..+ .|+|+|+++|+++ ....+|++++|++ |+++.
T Consensus 453 Gq~qRl~lARal~~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tvi~itH~~~--~~~~~d~i~~l~~-G~i~e 529 (547)
T PRK10522 453 GQKKRLALLLALAEERDILLLDEWAADQDPHFRREFYQVLLPLLQEMGKTIFAISHDDH--YFIHADRLLEMRN-GQLSE 529 (547)
T ss_pred HHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEEechH--HHHhCCEEEEEEC-CEEEE
Confidence 999999999999999999999999999999999999999976643 5899999999974 5778999999997 56665
Q ss_pred EC
Q 000808 912 VG 913 (1275)
Q Consensus 912 ~g 913 (1275)
..
T Consensus 530 ~~ 531 (547)
T PRK10522 530 LT 531 (547)
T ss_pred ec
Confidence 53
No 408
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.98 E-value=5e-32 Score=307.23 Aligned_cols=206 Identities=24% Similarity=0.343 Sum_probs=161.8
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCc-------cccceEEEecccc--ccCCCCCHHHHHHHH
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEF-------VPQRTAAYISQHD--VHIGEMTVRETLAFS 71 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~-------~~~~~~~yv~Q~~--~~~~~lTv~e~l~f~ 71 (1275)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++||+|++ .++ ..||.||+.|+
T Consensus 34 ~v~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~~l~-~~tv~~~l~~~ 109 (288)
T PRK13643 34 YTALIGHTGSGKSTLLQHLNGLLQPT---EGKVTVGDIVVSSTSKQKEIKPVRKKVGVVFQFPESQLF-EETVLKDVAFG 109 (288)
T ss_pred EEEEECCCCChHHHHHHHHhcCCCCC---CcEEEECCEECccccccccHHHHHhhEEEEecCcchhcc-cchHHHHHHhH
Confidence 47999999999999999999999987 99999999987421 1246799999985 444 46999999987
Q ss_pred HhccCCCCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCcc-ccccccCCCcccccccccc
Q 000808 72 ARCQGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEV-CDDTLVGDEMVRGISGGQK 150 (1275)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~-~~~t~vg~~~~~~LSGGqr 150 (1275)
....+.. . .+....+++.++.+||.+ ..+ +.++.||||||
T Consensus 110 ~~~~~~~----------~------------------------~~~~~~~~~~l~~~~L~~~~~~-----~~~~~LSgGqk 150 (288)
T PRK13643 110 PQNFGIP----------K------------------------EKAEKIAAEKLEMVGLADEFWE-----KSPFELSGGQM 150 (288)
T ss_pred HHHcCCC----------H------------------------HHHHHHHHHHHHHcCCChhhcc-----CCcccCCHHHH
Confidence 5432110 0 011123566788889853 333 45678999999
Q ss_pred chhhHHHHHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecCh
Q 000808 151 KRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPR 230 (1275)
Q Consensus 151 qRvsiA~al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~ 230 (1275)
||++|||+|+.+|++++|||||+|||+.++..+.+.++++.+ . +.+|++++|+.+++..+||+|++|++|++++.|++
T Consensus 151 qrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~-~-g~til~vtHd~~~~~~~~dri~~l~~G~i~~~g~~ 228 (288)
T PRK13643 151 RRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQ-S-GQTVVLVTHLMDDVADYADYVYLLEKGHIISCGTP 228 (288)
T ss_pred HHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHH-C-CCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCH
Confidence 999999999999999999999999999999999999998754 3 55666788888899999999999999999999999
Q ss_pred hhHHH---HHHhCCCCCCCCCChh
Q 000808 231 ELVLD---FFESMGFKCPERKGVA 251 (1275)
Q Consensus 231 ~~~~~---~f~~~G~~~p~~~~~a 251 (1275)
+++.+ .+...|+.+|.....+
T Consensus 229 ~~~~~~~~~~~~~~~~~p~~~~~~ 252 (288)
T PRK13643 229 SDVFQEVDFLKAHELGVPKATHFA 252 (288)
T ss_pred HHHHcCHHHHHHcCCCCChHHHHH
Confidence 88743 3445566665543333
No 409
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=99.98 E-value=4e-32 Score=298.80 Aligned_cols=189 Identities=22% Similarity=0.312 Sum_probs=152.0
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCC-----CCCCceeEEEEECCccCCCcc-----ccceEEEeccccccCCCCCHHHHHHH
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKL-----DSKLKFSGRVTYNGHGMDEFV-----PQRTAAYISQHDVHIGEMTVRETLAF 70 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~-----~~~~~~~G~v~~~g~~~~~~~-----~~~~~~yv~Q~~~~~~~lTv~e~l~f 70 (1275)
+++|+||||||||||+++|+|.+ +|. +|+|.++|+++.... .++.++|++|++.++ .+||+||+.+
T Consensus 28 ~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~-~~tv~e~l~~ 103 (227)
T cd03260 28 ITALIGPSGCGKSTLLRLLNRLNDLIPGAPD---EGEVLLDGKDIYDLDVDVLELRRRVGMVFQKPNPF-PGSIYDNVAY 103 (227)
T ss_pred EEEEECCCCCCHHHHHHHHHhhcccccCCCC---CeEEEECCEEhhhcchHHHHHHhhEEEEecCchhc-cccHHHHHHh
Confidence 47999999999999999999998 776 899999998875322 245799999998877 8999999988
Q ss_pred HHhccCCCCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCcccccccccc
Q 000808 71 SARCQGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQK 150 (1275)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqr 150 (1275)
+....+... . .+....++++++.+||.+..+.... +.+||||||
T Consensus 104 ~~~~~~~~~------~---------------------------~~~~~~~~~~l~~~~l~~~~~~~~~---~~~LSgG~~ 147 (227)
T cd03260 104 GLRLHGIKL------K---------------------------EELDERVEEALRKAALWDEVKDRLH---ALGLSGGQQ 147 (227)
T ss_pred HHHhcCCCc------H---------------------------HHHHHHHHHHHHHcCCChHHhccCC---cccCCHHHH
Confidence 654321000 0 0011234567888899765443320 468999999
Q ss_pred chhhHHHHHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecCh
Q 000808 151 KRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPR 230 (1275)
Q Consensus 151 qRvsiA~al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~ 230 (1275)
||++|||||+.+|++++|||||+|||+.++.++.+.|++..+ + ++|++++|+.+++.++||++++|++|++++.|++
T Consensus 148 qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~ 224 (227)
T cd03260 148 QRLCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKK--E-YTIVIVTHNMQQAARVADRTAFLLNGRLVEFGPT 224 (227)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhh--C-cEEEEEeccHHHHHHhCCEEEEEeCCEEEEecCc
Confidence 999999999999999999999999999999999999998754 3 5666688888899999999999999999999987
Q ss_pred hh
Q 000808 231 EL 232 (1275)
Q Consensus 231 ~~ 232 (1275)
++
T Consensus 225 ~~ 226 (227)
T cd03260 225 EQ 226 (227)
T ss_pred cc
Confidence 64
No 410
>TIGR01187 potA spermidine/putrescine ABC transporter ATP-binding subunit. This model describes spermidine/putrescine ABC transporter, ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Polyamines like spermidine and putrescine play vital role in cell proliferation, differentiation, and ion homeostasis. The concentration of polyamines within the cell are regulated by biosynthesis, degradation and transport (uptake and efflux included).
Probab=99.98 E-value=6.4e-32 Score=310.82 Aligned_cols=188 Identities=28% Similarity=0.349 Sum_probs=156.3
Q ss_pred EeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCcc-ccceEEEeccccccCCCCCHHHHHHHHHhccCCCCcch
Q 000808 4 LLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV-PQRTAAYISQHDVHIGEMTVRETLAFSARCQGVGSRYD 82 (1275)
Q Consensus 4 ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~~-~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~ 82 (1275)
|+|||||||||||++|+|..+|+ +|+|.++|+++.... .++.++|++|++.+++.+||+||+.|+.+..+..
T Consensus 1 l~G~nGsGKSTLl~~iaGl~~p~---~G~I~i~g~~i~~~~~~~~~i~~v~q~~~l~~~~tv~enl~~~~~~~~~~---- 73 (325)
T TIGR01187 1 LLGPSGCGKTTLLRLLAGFEQPD---SGSIMLDGEDVTNVPPHLRHINMVFQSYALFPHMTVEENVAFGLKMRKVP---- 73 (325)
T ss_pred CcCCCCCCHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEecCccccCCCcHHHHHHHHHhhcCCC----
Confidence 68999999999999999999987 999999998875432 2467999999999999999999999975432110
Q ss_pred hhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhhHHHHHhcC
Q 000808 83 MLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEMMVGP 162 (1275)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~al~~~ 162 (1275)
. .+....++++++.+||++..+ +.+..|||||||||+|||||+.+
T Consensus 74 ------~------------------------~~~~~~~~~~l~~~~l~~~~~-----~~~~~LSgGq~qRvalaraL~~~ 118 (325)
T TIGR01187 74 ------R------------------------AEIKPRVLEALRLVQLEEFAD-----RKPHQLSGGQQQRVALARALVFK 118 (325)
T ss_pred ------H------------------------HHHHHHHHHHHHHcCCcchhc-----CChhhCCHHHHHHHHHHHHHHhC
Confidence 0 001123566788899976554 44568999999999999999999
Q ss_pred CeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhhHH
Q 000808 163 ALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVL 234 (1275)
Q Consensus 163 p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~~~ 234 (1275)
|++++|||||+|||+.++.++.+.|+++.+.. +++++.++|+.+++..++|+|++|++|+++..|+++++.
T Consensus 119 p~lllLDEP~s~LD~~~~~~l~~~l~~l~~~~-g~tiiivTHd~~e~~~~~d~i~vl~~G~i~~~g~~~~~~ 189 (325)
T TIGR01187 119 PKILLLDEPLSALDKKLRDQMQLELKTIQEQL-GITFVFVTHDQEEAMTMSDRIAIMRKGKIAQIGTPEEIY 189 (325)
T ss_pred CCEEEEeCCCccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 99999999999999999999999999876543 455666888889999999999999999999999988874
No 411
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=99.98 E-value=7.8e-32 Score=293.55 Aligned_cols=185 Identities=29% Similarity=0.409 Sum_probs=150.9
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCcc-ccceEEEeccccccCCCCCHHHHHHHHHhccCCCC
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV-PQRTAAYISQHDVHIGEMTVRETLAFSARCQGVGS 79 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~~-~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~ 79 (1275)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++..||+||+.++....+..
T Consensus 28 ~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~v~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~- 103 (213)
T cd03301 28 FVVLLGPSGCGKTTTLRMIAGLEEPT---SGRIYIGGRDVTDLPPKDRDIAMVFQNYALYPHMTVYDNIAFGLKLRKVP- 103 (213)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCCcccceEEEEecChhhccCCCHHHHHHHHHHhcCCC-
Confidence 47899999999999999999999887 999999998875432 2357999999988888999999998865432100
Q ss_pred cchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhhHHHHH
Q 000808 80 RYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEMM 159 (1275)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~al 159 (1275)
. ++....++++++.+||.+..+. .++.||||||||++||||+
T Consensus 104 ---------~------------------------~~~~~~~~~~l~~~~l~~~~~~-----~~~~LS~G~~qr~~laral 145 (213)
T cd03301 104 ---------K------------------------DEIDERVREVAELLQIEHLLDR-----KPKQLSGGQRQRVALGRAI 145 (213)
T ss_pred ---------H------------------------HHHHHHHHHHHHHcCCHHHHhC-----ChhhCCHHHHHHHHHHHHH
Confidence 0 0011234667888999765554 4457999999999999999
Q ss_pred hcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEec
Q 000808 160 VGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQG 228 (1275)
Q Consensus 160 ~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G 228 (1275)
+.+|++++|||||+|||+.++.++.+.++++++.. +.+|++++|+.+++.+++|++++|++|++++.|
T Consensus 146 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tvi~~sH~~~~~~~~~d~i~~l~~g~~~~~g 213 (213)
T cd03301 146 VREPKVFLMDEPLSNLDAKLRVQMRAELKRLQQRL-GTTTIYVTHDQVEAMTMADRIAVMNDGQIQQIG 213 (213)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 99999999999999999999999999999876533 455666788888999999999999999999876
No 412
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=99.98 E-value=8e-32 Score=313.78 Aligned_cols=189 Identities=24% Similarity=0.400 Sum_probs=157.2
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCc-------cccceEEEeccccccCCCCCHHHHHHHHHh
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEF-------VPQRTAAYISQHDVHIGEMTVRETLAFSAR 73 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~-------~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~ 73 (1275)
+++|+|||||||||||++|+|.++|+ +|+|.++|+++... ..++.++|++|++.+++.+||+||+.|+..
T Consensus 25 i~~l~G~nGsGKSTLl~~iaGl~~p~---~G~I~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv~enl~~~~~ 101 (354)
T TIGR02142 25 VTAIFGRSGSGKTTLIRLIAGLTRPD---EGEIVLNGRTLFDSRKGIFLPPEKRRIGYVFQEARLFPHLSVRGNLRYGMK 101 (354)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECccCccccccchhhCCeEEEecCCccCCCCcHHHHHHHHhh
Confidence 47999999999999999999999987 99999999887432 124679999999999999999999998643
Q ss_pred ccCCCCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchh
Q 000808 74 CQGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRV 153 (1275)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv 153 (1275)
... . .+....++++++.+||++..+ +.+..|||||||||
T Consensus 102 ~~~---------~---------------------------~~~~~~~~~~l~~~gL~~~~~-----~~~~~LSgGqkqRv 140 (354)
T TIGR02142 102 RAR---------P---------------------------SERRISFERVIELLGIGHLLG-----RLPGRLSGGEKQRV 140 (354)
T ss_pred ccC---------h---------------------------hHHHHHHHHHHHHcCChhHhc-----CChhhCCHHHHHHH
Confidence 110 0 001123566788999976554 44567999999999
Q ss_pred hHHHHHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhhH
Q 000808 154 TTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELV 233 (1275)
Q Consensus 154 siA~al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~~ 233 (1275)
+|||||+.+|++++|||||+|||+.++..+.+.|+++.+.. +.++++++|+.+++..++|++++|++|++++.|+++++
T Consensus 141 alAraL~~~p~lllLDEPts~LD~~~~~~l~~~L~~l~~~~-g~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 219 (354)
T TIGR02142 141 AIGRALLSSPRLLLMDEPLAALDDPRKYEILPYLERLHAEF-GIPILYVSHSLQEVLRLADRVVVLEDGRVAAAGPIAEV 219 (354)
T ss_pred HHHHHHHcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHhc-CCEEEEEecCHHHHHHhCCEEEEEeCCEEEEECCHHHH
Confidence 99999999999999999999999999999999999876533 45566688888999999999999999999999998876
Q ss_pred H
Q 000808 234 L 234 (1275)
Q Consensus 234 ~ 234 (1275)
.
T Consensus 220 ~ 220 (354)
T TIGR02142 220 W 220 (354)
T ss_pred h
Confidence 4
No 413
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=99.97 E-value=5.6e-32 Score=296.29 Aligned_cols=188 Identities=30% Similarity=0.429 Sum_probs=154.3
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCc--cccceEEEeccccccCCCCCHHHHHHHHHhccCCC
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEF--VPQRTAAYISQHDVHIGEMTVRETLAFSARCQGVG 78 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~--~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~ 78 (1275)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++|++|++.+++.+||+||+.+.....+..
T Consensus 30 ~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~ 106 (220)
T cd03263 30 IFGLLGHNGAGKTTTLKMLTGELRPT---SGTAYINGYSIRTDRKAARQSLGYCPQFDALFDELTVREHLRFYARLKGLP 106 (220)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEecccchHHHhhhEEEecCcCCccccCCHHHHHHHHHHHcCCC
Confidence 47999999999999999999999887 99999999887432 22456999999988888999999998865432110
Q ss_pred CcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhhHHHH
Q 000808 79 SRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEM 158 (1275)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~a 158 (1275)
. .+....++++++.+||++..++. +..||||||||++||||
T Consensus 107 ----------~------------------------~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~la~a 147 (220)
T cd03263 107 ----------K------------------------SEIKEEVELLLRVLGLTDKANKR-----ARTLSGGMKRKLSLAIA 147 (220)
T ss_pred ----------H------------------------HHHHHHHHHHHHHcCCHHHHhCh-----hhhCCHHHHHHHHHHHH
Confidence 0 00111245678888997665544 45799999999999999
Q ss_pred HhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhhH
Q 000808 159 MVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELV 233 (1275)
Q Consensus 159 l~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~~ 233 (1275)
++.+|++++|||||+|||+.++.++.+.|++..+ + .+++.++|+.+++.+.+|++++|++|++++.|+++++
T Consensus 148 l~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 219 (220)
T cd03263 148 LIGGPSVLLLDEPTSGLDPASRRAIWDLILEVRK--G-RSIILTTHSMDEAEALCDRIAIMSDGKLRCIGSPQEL 219 (220)
T ss_pred HhcCCCEEEECCCCCCCCHHHHHHHHHHHHHHhc--C-CEEEEEcCCHHHHHHhcCEEEEEECCEEEecCCHHHc
Confidence 9999999999999999999999999999998743 3 5666688888889999999999999999999987654
No 414
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.97 E-value=9.9e-32 Score=298.79 Aligned_cols=199 Identities=25% Similarity=0.345 Sum_probs=155.8
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCcc------ccceEEEeccccccCCCCCHHHHHHHHHhc
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV------PQRTAAYISQHDVHIGEMTVRETLAFSARC 74 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~~------~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~ 74 (1275)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+||+||+.++...
T Consensus 29 ~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~ 105 (241)
T cd03256 29 FVALIGPSGAGKSTLLRCLNGLVEPT---SGSVLIDGTDINKLKGKALRQLRRQIGMIFQQFNLIERLSVLENVLSGRLG 105 (241)
T ss_pred EEEEECCCCCCHHHHHHHHhCCcCCC---CceEEECCEeccccCHhHHHHHHhccEEEcccCcccccCcHHHHHHhhhcc
Confidence 47999999999999999999999886 899999998875432 245799999999889999999999875321
Q ss_pred cCCCCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhh
Q 000808 75 QGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVT 154 (1275)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvs 154 (1275)
.. ... .... .. ...+....++++++.+||++..+ +.+..|||||||||+
T Consensus 106 ~~--~~~---~~~~------~~---------------~~~~~~~~~~~~l~~~~l~~~~~-----~~~~~LS~G~~qrv~ 154 (241)
T cd03256 106 RR--STW---RSLF------GL---------------FPKEEKQRALAALERVGLLDKAY-----QRADQLSGGQQQRVA 154 (241)
T ss_pred cc--hhh---hhhc------cc---------------CcHHHHHHHHHHHHHcCChhhhC-----CCcccCCHHHHHHHH
Confidence 00 000 0000 00 00011123566788899975444 345689999999999
Q ss_pred HHHHHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhhHH
Q 000808 155 TGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVL 234 (1275)
Q Consensus 155 iA~al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~~~ 234 (1275)
|||||+.+|++++|||||+|||+.++..+.+.|+++.+.. +.+|++++|+.+++.+++|++++|++|++++.|+++++.
T Consensus 155 la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tii~~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 233 (241)
T cd03256 155 IARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREE-GITVIVSLHQVDLAREYADRIVGLKDGRIVFDGPPAELT 233 (241)
T ss_pred HHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecCHHHhh
Confidence 9999999999999999999999999999999999876433 455666888888999999999999999999999887753
No 415
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=99.97 E-value=8.9e-32 Score=295.24 Aligned_cols=188 Identities=23% Similarity=0.389 Sum_probs=151.1
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCcc----ccceEEEeccccccCCCCCHHHHHHHHHhccC
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV----PQRTAAYISQHDVHIGEMTVRETLAFSARCQG 76 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~~----~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~ 76 (1275)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|++||+.++.....
T Consensus 28 ~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~~~l~~~~~~~~ 104 (222)
T cd03224 28 IVALLGRNGAGKTTLLKTIMGLLPPR---SGSIRFDGRDITGLPPHERARAGIGYVPEGRRIFPELTVEENLLLGAYARR 104 (222)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcCCCCHHHHHhcCeEEeccccccCCCCcHHHHHHHHhhhcC
Confidence 47999999999999999999999987 999999998775432 13569999999999999999999988643211
Q ss_pred CCCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHh-CCccccccccCCCccccccccccchhhH
Q 000808 77 VGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVL-GLEVCDDTLVGDEMVRGISGGQKKRVTT 155 (1275)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-gL~~~~~t~vg~~~~~~LSGGqrqRvsi 155 (1275)
. .+ ....++.+++.+ ++++..+ +.++.||||||||++|
T Consensus 105 ---~----~~-----------------------------~~~~~~~~l~~~~~l~~~~~-----~~~~~LS~G~~qrv~l 143 (222)
T cd03224 105 ---R----AK-----------------------------RKARLERVYELFPRLKERRK-----QLAGTLSGGEQQMLAI 143 (222)
T ss_pred ---c----hh-----------------------------HHHHHHHHHHHHHhhhhhhh-----CchhhCCHHHHHHHHH
Confidence 0 00 001123445555 3554443 3456799999999999
Q ss_pred HHHHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhhHH
Q 000808 156 GEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVL 234 (1275)
Q Consensus 156 A~al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~~~ 234 (1275)
||||+.+|++++|||||+|||+.++..+.+.|++..+ .+.+|++++|+.+++.+.+|++++|++|++++.|+.+++.
T Consensus 144 aral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 220 (222)
T cd03224 144 ARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIRELRD--EGVTILLVEQNARFALEIADRAYVLERGRVVLEGTAAELL 220 (222)
T ss_pred HHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHhccEEEEeeCCeEEEeCCHHHHh
Confidence 9999999999999999999999999999999998754 3456666788888999999999999999999999877653
No 416
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=99.97 E-value=7.3e-32 Score=338.73 Aligned_cols=192 Identities=24% Similarity=0.347 Sum_probs=151.0
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCcc---ccceEEEeccccccCCCCCHHHHHHHHHhccCC
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV---PQRTAAYISQHDVHIGEMTVRETLAFSARCQGV 77 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~~---~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~ 77 (1275)
.+||+||||||||||+++|+|.+ |. +|+|.+||.++++.. .++.++||+|++.+|+ .|++|||.++.+-
T Consensus 378 ~vaIvG~SGsGKSTL~~lL~g~~-p~---~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~LF~-~TI~eNI~~g~~~--- 449 (588)
T PRK11174 378 RIALVGPSGAGKTSLLNALLGFL-PY---QGSLKINGIELRELDPESWRKHLSWVGQNPQLPH-GTLRDNVLLGNPD--- 449 (588)
T ss_pred EEEEECCCCCCHHHHHHHHhcCC-CC---CcEEEECCEecccCCHHHHHhheEEecCCCcCCC-cCHHHHhhcCCCC---
Confidence 37999999999999999999999 86 899999999887654 3578999999988775 5999999985210
Q ss_pred CCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhhHHH
Q 000808 78 GSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGE 157 (1275)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~ 157 (1275)
.+.++..+++... ..++.++ .|+++.||.||++ +.+||||||||++|||
T Consensus 450 ----------------------~~~eei~~al~~a------~l~~~i~--~lp~G~dT~vge~-G~~LSGGQrQRialAR 498 (588)
T PRK11174 450 ----------------------ASDEQLQQALENA------WVSEFLP--LLPQGLDTPIGDQ-AAGLSVGQAQRLALAR 498 (588)
T ss_pred ----------------------CCHHHHHHHHHHh------CHHHHHH--hcccccccccccC-CCCCCHHHHHHHHHHH
Confidence 0011111111100 0122222 3788999999976 5589999999999999
Q ss_pred HHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhhHHH
Q 000808 158 MMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVLD 235 (1275)
Q Consensus 158 al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~~~~ 235 (1275)
|++++|+|++||||||+||+.++..+.+.+++.. .++|+|+ ++|.. +..+.+|+|++|++|++++.|+++++.+
T Consensus 499 All~~~~IliLDE~TSaLD~~te~~i~~~l~~~~--~~~TvIi-ItHrl-~~i~~aD~Iivl~~G~i~e~G~~~eL~~ 572 (588)
T PRK11174 499 ALLQPCQLLLLDEPTASLDAHSEQLVMQALNAAS--RRQTTLM-VTHQL-EDLAQWDQIWVMQDGQIVQQGDYAELSQ 572 (588)
T ss_pred HHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHh--CCCEEEE-EecCh-HHHHhCCEEEEEeCCeEeecCCHHHHHh
Confidence 9999999999999999999999999999998763 2455555 55554 4567799999999999999999999864
No 417
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=99.97 E-value=1.1e-31 Score=308.10 Aligned_cols=194 Identities=21% Similarity=0.221 Sum_probs=158.6
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCcc------ccceEEEecccc--ccCCCCCHHHHHHHHH
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV------PQRTAAYISQHD--VHIGEMTVRETLAFSA 72 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~~------~~~~~~yv~Q~~--~~~~~lTv~e~l~f~~ 72 (1275)
+++|+|+||||||||+++|+|+++|+ +|+|.++|.++.... .++.++||+|++ .+++.+||.||+.+..
T Consensus 49 ~~~lvG~sGsGKSTLlk~i~Gl~~p~---~G~I~~~G~~i~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l 125 (331)
T PRK15079 49 TLGVVGESGCGKSTFARAIIGLVKAT---DGEVAWLGKDLLGMKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPL 125 (331)
T ss_pred EEEEECCCCCCHHHHHHHHHCCCCCC---CcEEEECCEECCcCCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHH
Confidence 47999999999999999999999886 999999999876432 245799999997 5788999999999865
Q ss_pred hccCCCCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccch
Q 000808 73 RCQGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKR 152 (1275)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqR 152 (1275)
...... .. ..+....++++++.+||.. .+.++.++.||||||||
T Consensus 126 ~~~~~~--------~~------------------------~~~~~~~~~~~l~~vgl~~----~~~~~~p~~LSgG~~QR 169 (331)
T PRK15079 126 RTYHPK--------LS------------------------RQEVKDRVKAMMLKVGLLP----NLINRYPHEFSGGQCQR 169 (331)
T ss_pred HHhccC--------CC------------------------HHHHHHHHHHHHHHcCCCh----HHhcCCcccCCHHHHHH
Confidence 422100 00 0011223567788999942 12345677899999999
Q ss_pred hhHHHHHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhh
Q 000808 153 VTTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPREL 232 (1275)
Q Consensus 153 vsiA~al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~ 232 (1275)
|+|||||+.+|++|++||||+|||+.++.++.+.|+++.+. .+.++++++|+...+.+++|+|++|++|++++.|+.++
T Consensus 170 v~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~-~~~til~iTHdl~~~~~~~dri~vl~~G~ive~g~~~~ 248 (331)
T PRK15079 170 IGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQRE-MGLSLIFIAHDLAVVKHISDRVLVMYLGHAVELGTYDE 248 (331)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHH
Confidence 99999999999999999999999999999999999987653 35667778999999999999999999999999999888
Q ss_pred HH
Q 000808 233 VL 234 (1275)
Q Consensus 233 ~~ 234 (1275)
+.
T Consensus 249 i~ 250 (331)
T PRK15079 249 VY 250 (331)
T ss_pred HH
Confidence 75
No 418
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=99.97 E-value=6.3e-32 Score=295.41 Aligned_cols=184 Identities=30% Similarity=0.411 Sum_probs=150.5
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCc--cccceEEEeccccccCCCCCHHHHHHHHHhccCCC
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEF--VPQRTAAYISQHDVHIGEMTVRETLAFSARCQGVG 78 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~--~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~ 78 (1275)
+++|+||||||||||+++|+|.++|+ +|+|.++|+++... ..++.++|++|++.+++.+||+||+.+.....+..
T Consensus 33 ~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~ 109 (218)
T cd03266 33 VTGLLGPNGAGKTTTLRMLAGLLEPD---AGFATVDGFDVVKEPAEARRRLGFVSDSTGLYDRLTARENLEYFAGLYGLK 109 (218)
T ss_pred EEEEECCCCCCHHHHHHHHhCCcCCC---CceEEECCEEcccCHHHHHhhEEEecCCcccCcCCCHHHHHHHHHHHcCCC
Confidence 47999999999999999999999887 99999999887532 22467999999998899899999998754322110
Q ss_pred CcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhhHHHH
Q 000808 79 SRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEM 158 (1275)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~a 158 (1275)
. .+....++++++.+||++..+. .++.||||||||++||||
T Consensus 110 ----------~------------------------~~~~~~~~~~l~~~~l~~~~~~-----~~~~LS~G~~qrv~lara 150 (218)
T cd03266 110 ----------G------------------------DELTARLEELADRLGMEELLDR-----RVGGFSTGMRQKVAIARA 150 (218)
T ss_pred ----------H------------------------HHHHHHHHHHHHHcCCHHHHhh-----hhhhcCHHHHHHHHHHHH
Confidence 0 0011235668888999765543 456799999999999999
Q ss_pred HhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEec
Q 000808 159 MVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQG 228 (1275)
Q Consensus 159 l~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G 228 (1275)
++.+|++++|||||+|||+.++..+.+.|+++.+ . +.++++++|+.+++.+.+|++++|++|++++.|
T Consensus 151 l~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tii~~tH~~~~~~~~~d~i~~l~~G~i~~~~ 218 (218)
T cd03266 151 LVHDPPVLLLDEPTTGLDVMATRALREFIRQLRA-L-GKCILFSTHIMQEVERLCDRVVVLHRGRVVYEG 218 (218)
T ss_pred HhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhcCEEEEEECCEEeecC
Confidence 9999999999999999999999999999998753 3 455666888888999999999999999998754
No 419
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=1.2e-31 Score=304.49 Aligned_cols=191 Identities=21% Similarity=0.299 Sum_probs=154.2
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCc-------cccceEEEeccccc-cCCCCCHHHHHHHHH
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEF-------VPQRTAAYISQHDV-HIGEMTVRETLAFSA 72 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~-------~~~~~~~yv~Q~~~-~~~~lTv~e~l~f~~ 72 (1275)
+++|+||||||||||+++|+|.++|+ +|+|.++|+++... ..++.++||+|++. .+...||+||+.|+.
T Consensus 35 ~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~~l~~~tv~eni~~~~ 111 (290)
T PRK13634 35 YVAIIGHTGSGKSTLLQHLNGLLQPT---SGTVTIGERVITAGKKNKKLKPLRKKVGIVFQFPEHQLFEETVEKDICFGP 111 (290)
T ss_pred EEEEECCCCCcHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhhEEEEeeCchhhhhhhhHHHHHHHHH
Confidence 47999999999999999999999987 99999999987421 12357999999852 333579999999865
Q ss_pred hccCCCCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCc-cccccccCCCccccccccccc
Q 000808 73 RCQGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLE-VCDDTLVGDEMVRGISGGQKK 151 (1275)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~~t~vg~~~~~~LSGGqrq 151 (1275)
...+.. ..+....++++++.+||+ ...+ +.++.|||||||
T Consensus 112 ~~~~~~----------------------------------~~~~~~~~~~~l~~~gL~~~~~~-----~~~~~LSgGq~q 152 (290)
T PRK13634 112 MNFGVS----------------------------------EEDAKQKAREMIELVGLPEELLA-----RSPFELSGGQMR 152 (290)
T ss_pred HHcCCC----------------------------------HHHHHHHHHHHHHHCCCChhhhh-----CCcccCCHHHHH
Confidence 422110 001112356788999996 3344 445679999999
Q ss_pred hhhHHHHHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChh
Q 000808 152 RVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRE 231 (1275)
Q Consensus 152 RvsiA~al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~ 231 (1275)
||+|||||+.+|++++|||||+|||+.++.++.+.|+++.+. .+.+|++++|+.+++.+.||||++|++|++++.|+++
T Consensus 153 rv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~-~g~tviiitHd~~~~~~~~drv~~l~~G~i~~~g~~~ 231 (290)
T PRK13634 153 RVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKE-KGLTTVLVTHSMEDAARYADQIVVMHKGTVFLQGTPR 231 (290)
T ss_pred HHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHH
Confidence 999999999999999999999999999999999999987653 3556667899999999999999999999999999988
Q ss_pred hHH
Q 000808 232 LVL 234 (1275)
Q Consensus 232 ~~~ 234 (1275)
++.
T Consensus 232 ~~~ 234 (290)
T PRK13634 232 EIF 234 (290)
T ss_pred HHh
Confidence 764
No 420
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.97 E-value=1.2e-31 Score=297.74 Aligned_cols=191 Identities=25% Similarity=0.374 Sum_probs=155.5
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCcc---ccceEEEeccccccCCCCCHHHHHHHHHhccCC
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV---PQRTAAYISQHDVHIGEMTVRETLAFSARCQGV 77 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~~---~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~ 77 (1275)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+||+||+.++....+.
T Consensus 29 ~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~ 105 (242)
T cd03295 29 FLVLIGPSGSGKTTTMKMINRLIEPT---SGEIFIDGEDIREQDPVELRRKIGYVIQQIGLFPHMTVEENIALVPKLLKW 105 (242)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCeEcCcCChHHhhcceEEEccCccccCCCcHHHHHHHHHHHcCC
Confidence 47999999999999999999999887 899999998765422 245799999999999999999999886443210
Q ss_pred CCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCcc--ccccccCCCccccccccccchhhH
Q 000808 78 GSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEV--CDDTLVGDEMVRGISGGQKKRVTT 155 (1275)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~--~~~t~vg~~~~~~LSGGqrqRvsi 155 (1275)
. . .+....+.++++.+||+. .. ++.+..|||||||||+|
T Consensus 106 ~----------~------------------------~~~~~~~~~~l~~l~l~~~~~~-----~~~~~~LS~G~~qrv~l 146 (242)
T cd03295 106 P----------K------------------------EKIRERADELLALVGLDPAEFA-----DRYPHELSGGQQQRVGV 146 (242)
T ss_pred C----------H------------------------HHHHHHHHHHHHHcCCCcHHHH-----hcChhhCCHHHHHHHHH
Confidence 0 0 001123456788899974 33 34566899999999999
Q ss_pred HHHHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhhHH
Q 000808 156 GEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVL 234 (1275)
Q Consensus 156 A~al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~~~ 234 (1275)
|||++.+|++++|||||+|||+.++..+.+.|++..+. .+++|++++|+.+++.+++|+|++|++|++++.|+++++.
T Consensus 147 aral~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~-~g~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 224 (242)
T cd03295 147 ARALAADPPLLLMDEPFGALDPITRDQLQEEFKRLQQE-LGKTIVFVTHDIDEAFRLADRIAIMKNGEIVQVGTPDEIL 224 (242)
T ss_pred HHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHH-cCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHH
Confidence 99999999999999999999999999999999987643 2456666788888899999999999999999999887653
No 421
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=99.97 E-value=6.8e-32 Score=291.90 Aligned_cols=177 Identities=27% Similarity=0.343 Sum_probs=144.5
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCccccceEEEeccccc-cCCCCCHHHHHHHHHhccCCCC
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFVPQRTAAYISQHDV-HIGEMTVRETLAFSARCQGVGS 79 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~~~~~~~~yv~Q~~~-~~~~lTv~e~l~f~~~~~~~~~ 79 (1275)
+++|+|||||||||||++|+|.++|+ +|+|.++|.++.....++.++|++|++. .+..+||+||+.++.....
T Consensus 28 ~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~~tv~e~l~~~~~~~~--- 101 (205)
T cd03226 28 IIALTGKNGAGKTTLAKILAGLIKES---SGSILLNGKPIKAKERRKSIGYVMQDVDYQLFTDSVREELLLGLKELD--- 101 (205)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEhhhHHhhcceEEEecChhhhhhhccHHHHHhhhhhhcC---
Confidence 47999999999999999999999887 9999999988754334567999999864 3456799999987542110
Q ss_pred cchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhhHHHHH
Q 000808 80 RYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEMM 159 (1275)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~al 159 (1275)
+....++++++.+||.+..++ .+..||||||||++|||||
T Consensus 102 -----------------------------------~~~~~~~~~l~~~~l~~~~~~-----~~~~LS~G~~qrv~laral 141 (205)
T cd03226 102 -----------------------------------AGNEQAETVLKDLDLYALKER-----HPLSLSGGQKQRLAIAAAL 141 (205)
T ss_pred -----------------------------------ccHHHHHHHHHHcCCchhcCC-----CchhCCHHHHHHHHHHHHH
Confidence 000124567888999765554 4557999999999999999
Q ss_pred hcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEE
Q 000808 160 VGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIV 225 (1275)
Q Consensus 160 ~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~ 225 (1275)
+.+|++++|||||+|||+.++..+.+.|++..+ . +.+|+.++|+.+++.+++|++++|++|+++
T Consensus 142 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tii~~sH~~~~~~~~~d~i~~l~~G~iv 205 (205)
T cd03226 142 LSGKDLLIFDEPTSGLDYKNMERVGELIRELAA-Q-GKAVIVITHDYEFLAKVCDRVLLLANGAIV 205 (205)
T ss_pred HhCCCEEEEeCCCccCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEEECCEEC
Confidence 999999999999999999999999999998754 3 455666788888899999999999999874
No 422
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=99.97 E-value=7.4e-32 Score=294.84 Aligned_cols=180 Identities=25% Similarity=0.350 Sum_probs=145.3
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCcc-------ccceEEEeccccccCCCCCHHHHHHHHHh
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV-------PQRTAAYISQHDVHIGEMTVRETLAFSAR 73 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~~-------~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~ 73 (1275)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+||+||+.++..
T Consensus 32 ~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~ 108 (218)
T cd03255 32 FVAIVGPSGSGKSTLLNILGGLDRPT---SGEVRVDGTDISKLSEKELAAFRRRHIGFVFQSFNLLPDLTALENVELPLL 108 (218)
T ss_pred EEEEEcCCCCCHHHHHHHHhCCcCCC---ceeEEECCEehhhcchhHHHHHHhhcEEEEeeccccCCCCcHHHHHHHHHh
Confidence 47999999999999999999999887 999999998875432 13579999999999999999999998654
Q ss_pred ccCCCCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchh
Q 000808 74 CQGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRV 153 (1275)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv 153 (1275)
..+.. . .+....++++++.+||++..+ +.++.|||||||||
T Consensus 109 ~~~~~-------~---------------------------~~~~~~~~~~l~~~~l~~~~~-----~~~~~LS~G~~qrv 149 (218)
T cd03255 109 LAGVP-------K---------------------------KERRERAEELLERVGLGDRLN-----HYPSELSGGQQQRV 149 (218)
T ss_pred hcCCC-------H---------------------------HHHHHHHHHHHHHcCCchhhh-----cChhhcCHHHHHHH
Confidence 32110 0 001123566788899976544 34567999999999
Q ss_pred hHHHHHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeE
Q 000808 154 TTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQI 224 (1275)
Q Consensus 154 siA~al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i 224 (1275)
+|||||+.+|++++|||||+|||+.++.++.+.++++.+.. +.+|++++|+.+++. .||++++|++|++
T Consensus 150 ~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~-~~tii~~sH~~~~~~-~~d~v~~l~~G~i 218 (218)
T cd03255 150 AIARALANDPKIILADEPTGNLDSETGKEVMELLRELNKEA-GTTIVVVTHDPELAE-YADRIIELRDGKI 218 (218)
T ss_pred HHHHHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhc-CCeEEEEECCHHHHh-hhcEEEEeeCCcC
Confidence 99999999999999999999999999999999999876432 455566777777776 9999999999974
No 423
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=99.97 E-value=9.9e-32 Score=291.45 Aligned_cols=180 Identities=25% Similarity=0.354 Sum_probs=148.9
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCc-cccceEEEeccccccCCCCCHHHHHHHHHhccCCCC
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEF-VPQRTAAYISQHDVHIGEMTVRETLAFSARCQGVGS 79 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~-~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~ 79 (1275)
+++|+||||||||||+++|+|..+|+ +|+|.++|.++... ..++.++|++|++.+++.+||+||+.+.....+.
T Consensus 28 ~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~-- 102 (208)
T cd03268 28 IYGFLGPNGAGKTTTMKIILGLIKPD---SGEITFDGKSYQKNIEALRRIGALIEAPGFYPNLTARENLRLLARLLGI-- 102 (208)
T ss_pred EEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCCcccchHHHHhhEEEecCCCccCccCcHHHHHHHHHHhcCC--
Confidence 47999999999999999999999887 99999999876432 2245799999998889999999999886432110
Q ss_pred cchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhhHHHHH
Q 000808 80 RYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEMM 159 (1275)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~al 159 (1275)
....++++++.+||++..++ .++.|||||||||+||||+
T Consensus 103 ------------------------------------~~~~~~~~l~~~~l~~~~~~-----~~~~LS~G~~qrv~la~al 141 (208)
T cd03268 103 ------------------------------------RKKRIDEVLDVVGLKDSAKK-----KVKGFSLGMKQRLGIALAL 141 (208)
T ss_pred ------------------------------------cHHHHHHHHHHcCCHHHHhh-----hHhhCCHHHHHHHHHHHHH
Confidence 00124557888888765544 4557999999999999999
Q ss_pred hcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEec
Q 000808 160 VGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQG 228 (1275)
Q Consensus 160 ~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G 228 (1275)
+.+|++++|||||+|||+.++..+.+.+++..+ . +.++++++|+.+++.+.+|++++|++|++++.|
T Consensus 142 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tii~~tH~~~~~~~~~d~v~~l~~g~i~~~g 208 (208)
T cd03268 142 LGNPDLLILDEPTNGLDPDGIKELRELILSLRD-Q-GITVLISSHLLSEIQKVADRIGIINKGKLIEEG 208 (208)
T ss_pred hcCCCEEEECCCcccCCHHHHHHHHHHHHHHHH-C-CCEEEEEcCCHHHHHHhcCEEEEEECCEEEecC
Confidence 999999999999999999999999999998754 3 455666788888999999999999999998765
No 424
>PRK10535 macrolide transporter ATP-binding /permease protein; Provisional
Probab=99.97 E-value=6.2e-31 Score=329.98 Aligned_cols=219 Identities=23% Similarity=0.337 Sum_probs=184.4
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 756 (1275)
-++++|+++.++.. .+.+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|++.+||.++
T Consensus 4 ~l~~~nl~~~y~~~---------~~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~i 72 (648)
T PRK10535 4 LLELKDIRRSYPSG---------EEQVEVLKGISLDIYAGEMVAIVGASGSGKSTLMNILGCLDK--PTSGTYRVAGQDV 72 (648)
T ss_pred EEEEeeEEEEeCCC---------CCCeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCeEEEECCEEc
Confidence 48899999887411 112469999999999999999999999999999999999876 3489999999876
Q ss_pred Ccc---c----ccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCC
Q 000808 757 KQE---T----FTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESG 829 (1275)
Q Consensus 757 ~~~---~----~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~ 829 (1275)
... . .++.++|++|+..+++.+|+.||+.+..... .....+.++++.++++.+|+.+..|... ..
T Consensus 73 ~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~lgl~~~~~~~~-----~~ 144 (648)
T PRK10535 73 ATLDADALAQLRREHFGFIFQRYHLLSHLTAAQNVEVPAVYA---GLERKQRLLRAQELLQRLGLEDRVEYQP-----SQ 144 (648)
T ss_pred CcCCHHHHHHHHhccEEEEeCCcccCCCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHCCChhhhcCCc-----cc
Confidence 431 1 1457899999999999999999998764322 1233455667889999999988777765 46
Q ss_pred CCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcEE
Q 000808 830 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQE 909 (1275)
Q Consensus 830 lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~ 909 (1275)
||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|+|+++|+++ ..+.+|++++|++ |++
T Consensus 145 LS~Gq~qrv~LAraL~~~P~lLllDEP~~gLD~~s~~~l~~ll~~l~~~g~tilivsH~~~--~~~~~d~i~~l~~-G~i 221 (648)
T PRK10535 145 LSGGQQQRVSIARALMNGGQVILADEPTGALDSHSGEEVMAILHQLRDRGHTVIIVTHDPQ--VAAQAERVIEIRD-GEI 221 (648)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhcCCEEEEECCCHH--HHHhCCEEEEEEC-CEE
Confidence 9999999999999999999999999999999999999999999998777999999999975 4567999999986 799
Q ss_pred EEECCCCc
Q 000808 910 IYVGPLGR 917 (1275)
Q Consensus 910 ~~~g~~~~ 917 (1275)
+..|+.++
T Consensus 222 ~~~g~~~~ 229 (648)
T PRK10535 222 VRNPPAQE 229 (648)
T ss_pred EeecCccc
Confidence 99998853
No 425
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=99.97 E-value=8.8e-32 Score=313.94 Aligned_cols=194 Identities=24% Similarity=0.397 Sum_probs=158.6
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCcc---ccceEEEeccccccCCCCCHHHHHHHHHhccCC
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV---PQRTAAYISQHDVHIGEMTVRETLAFSARCQGV 77 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~~---~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~ 77 (1275)
+++|+|||||||||||++|+|.++|. +|+|.++|+++.... .++.++||+|++.+++.+||+||+.++..-..
T Consensus 31 iv~liGpNGaGKSTLLk~LaGll~p~---sG~I~l~G~~i~~~~~~~~~~~ig~v~q~~~l~~~~tv~e~v~~~~~~~~- 106 (402)
T PRK09536 31 LVGLVGPNGAGKTTLLRAINGTLTPT---AGTVLVAGDDVEALSARAASRRVASVPQDTSLSFEFDVRQVVEMGRTPHR- 106 (402)
T ss_pred EEEEECCCCchHHHHHHHHhcCCCCC---CcEEEECCEEcCcCCHHHHhcceEEEccCCCCCCCCCHHHHHHhccchhc-
Confidence 47999999999999999999999987 999999998876532 24679999999988889999999998532100
Q ss_pred CCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhhHHH
Q 000808 78 GSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGE 157 (1275)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~ 157 (1275)
.++.. . ..+....+++.++.+||.+..++ .++.|||||||||+|||
T Consensus 107 -~~~~~---~-------------------------~~~~~~~v~~~le~vgl~~~~~~-----~~~~LSgGerQRv~IAr 152 (402)
T PRK09536 107 -SRFDT---W-------------------------TETDRAAVERAMERTGVAQFADR-----PVTSLSGGERQRVLLAR 152 (402)
T ss_pred -ccccC---C-------------------------CHHHHHHHHHHHHHcCCchhhcC-----ChhhCCHHHHHHHHHHH
Confidence 00000 0 00112245778899999766554 45679999999999999
Q ss_pred HHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhhHH
Q 000808 158 MMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVL 234 (1275)
Q Consensus 158 al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~~~ 234 (1275)
||+.+|++|+|||||+|||+.++.++.+.|+++++ . +++|++++|+.+++.++|||+++|++|++++.|+++++.
T Consensus 153 AL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~-~-g~TIIivsHdl~~~~~~adrii~l~~G~iv~~G~~~ev~ 227 (402)
T PRK09536 153 ALAQATPVLLLDEPTASLDINHQVRTLELVRRLVD-D-GKTAVAAIHDLDLAARYCDELVLLADGRVRAAGPPADVL 227 (402)
T ss_pred HHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHh-c-CCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHh
Confidence 99999999999999999999999999999999864 3 456666899999999999999999999999999998764
No 426
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=99.97 E-value=9.7e-32 Score=269.52 Aligned_cols=193 Identities=28% Similarity=0.398 Sum_probs=155.0
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCccc---cceEEEeccccccCCCCCHHHHHHHHHhccCC
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFVP---QRTAAYISQHDVHIGEMTVRETLAFSARCQGV 77 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~~~---~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~ 77 (1275)
|++|+|||||||||||+.|+|++.|+ +|++.+||.+++.... .+.-+..||+..+-...||+|.+.++..=.+.
T Consensus 29 v~ailGPNGAGKSTlLk~LsGel~p~---~G~v~~~g~~l~~~~~~~lA~~raVlpQ~s~laFpFtv~eVV~mGr~p~~~ 105 (259)
T COG4559 29 VLAILGPNGAGKSTLLKALSGELSPD---SGEVTLNGVPLNSWPPEELARHRAVLPQNSSLAFPFTVQEVVQMGRIPHRS 105 (259)
T ss_pred EEEEECCCCccHHHHHHHhhCccCCC---CCeEeeCCcChhhCCHHHHHHHhhhcccCcccccceEHHHHHHhccccccc
Confidence 57999999999999999999999998 9999999999866433 24568999998887778999999997542211
Q ss_pred CCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhhHHH
Q 000808 78 GSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGE 157 (1275)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~ 157 (1275)
+.. ..+...+.+..|...++...+. +....|||||||||.+||
T Consensus 106 g~~--------------------------------~~e~~~i~~~ala~~d~~~la~-----R~y~~LSGGEqQRVqlAR 148 (259)
T COG4559 106 GRE--------------------------------PEEDERIAAQALAATDLSGLAG-----RDYRTLSGGEQQRVQLAR 148 (259)
T ss_pred CCC--------------------------------chhhHHHHHHHHHHcChhhhhc-----cchhhcCchHHHHHHHHH
Confidence 100 0112223455666666665443 445689999999999999
Q ss_pred HHhc------CCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChh
Q 000808 158 MMVG------PALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRE 231 (1275)
Q Consensus 158 al~~------~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~ 231 (1275)
.|+. ++++||||||||+||....+++++..+++++. +..|+.+.|+.+-+..+||||++|.+||++.+|+++
T Consensus 149 vLaQl~~~v~~~r~L~LDEPtsaLDi~HQ~~tl~laR~la~~--g~~V~~VLHDLNLAA~YaDrivll~~Grv~a~g~p~ 226 (259)
T COG4559 149 VLAQLWPPVPSGRWLFLDEPTSALDIAHQHHTLRLARQLARE--GGAVLAVLHDLNLAAQYADRIVLLHQGRVIASGSPQ 226 (259)
T ss_pred HHHHccCCCCCCceEEecCCccccchHHHHHHHHHHHHHHhc--CCcEEEEEccchHHHHhhheeeeeeCCeEeecCCHH
Confidence 9985 34599999999999999999999999999874 344555889999999999999999999999999998
Q ss_pred hHHH
Q 000808 232 LVLD 235 (1275)
Q Consensus 232 ~~~~ 235 (1275)
++..
T Consensus 227 ~vlt 230 (259)
T COG4559 227 DVLT 230 (259)
T ss_pred HhcC
Confidence 8753
No 427
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=2e-31 Score=300.26 Aligned_cols=189 Identities=24% Similarity=0.304 Sum_probs=153.5
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCcc---ccceEEEeccccc-cCCCCCHHHHHHHHHhccC
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV---PQRTAAYISQHDV-HIGEMTVRETLAFSARCQG 76 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~~---~~~~~~yv~Q~~~-~~~~lTv~e~l~f~~~~~~ 76 (1275)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++. .++..||.||+.|+....+
T Consensus 33 ~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~ 109 (274)
T PRK13647 33 KTALLGPNGAGKSTLLLHLNGIYLPQ---RGRVKVMGREVNAENEKWVRSKVGLVFQDPDDQVFSSTVWDDVAFGPVNMG 109 (274)
T ss_pred EEEEECCCCCcHHHHHHHHhcCCCCC---ceEEEECCEECCCCCHHHHHhhEEEEecChhhhhccCcHHHHHHhhHHHcC
Confidence 47999999999999999999999987 999999998875432 2357999999863 4556899999998643211
Q ss_pred CCCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhhHH
Q 000808 77 VGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTG 156 (1275)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA 156 (1275)
.. . .+....++.+++.+||.+..+. .+..|||||||||+||
T Consensus 110 ~~----------~------------------------~~~~~~~~~~l~~~~L~~~~~~-----~~~~LSgG~~qrv~la 150 (274)
T PRK13647 110 LD----------K------------------------DEVERRVEEALKAVRMWDFRDK-----PPYHLSYGQKKRVAIA 150 (274)
T ss_pred CC----------H------------------------HHHHHHHHHHHHHCCCHHHhcC-----ChhhCCHHHHHHHHHH
Confidence 10 0 0011234667888999765544 4567999999999999
Q ss_pred HHHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhhH
Q 000808 157 EMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELV 233 (1275)
Q Consensus 157 ~al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~~ 233 (1275)
|||+.+|++++|||||+|||+.++.++.+.+++++. . +.+|++++|+.+++.+.||++++|++|++++.|+++++
T Consensus 151 raL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-g~tili~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 225 (274)
T PRK13647 151 GVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHN-Q-GKTVIVATHDVDLAAEWADQVIVLKEGRVLAEGDKSLL 225 (274)
T ss_pred HHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHh
Confidence 999999999999999999999999999999998754 3 45666688999899999999999999999999998654
No 428
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=1.5e-31 Score=305.97 Aligned_cols=189 Identities=23% Similarity=0.372 Sum_probs=152.5
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCc-------------------cccceEEEecccc--ccC
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEF-------------------VPQRTAAYISQHD--VHI 59 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~-------------------~~~~~~~yv~Q~~--~~~ 59 (1275)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++||+|++ .++
T Consensus 54 ~~~I~G~nGsGKSTLl~~L~Gl~~p~---~G~I~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~ 130 (320)
T PRK13631 54 IYFIIGNSGSGKSTLVTHFNGLIKSK---YGTIQVGDIYIGDKKNNHELITNPYSKKIKNFKELRRRVSMVFQFPEYQLF 130 (320)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CCeEEECCEEcccccccccccccccccccchHHHHHhcEEEEEECchhccc
Confidence 47999999999999999999999987 99999999876432 1246799999986 455
Q ss_pred CCCCHHHHHHHHHhccCCCCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCcc-ccccccC
Q 000808 60 GEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEV-CDDTLVG 138 (1275)
Q Consensus 60 ~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~-~~~t~vg 138 (1275)
+ .||+||+.|+....+.. ..+....++++++.+||+. ..
T Consensus 131 ~-~tv~eni~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~gL~~~~~----- 170 (320)
T PRK13631 131 K-DTIEKDIMFGPVALGVK----------------------------------KSEAKKLAKFYLNKMGLDDSYL----- 170 (320)
T ss_pred c-chHHHHHHhhHHhcCCC----------------------------------HHHHHHHHHHHHHHcCCChhHh-----
Confidence 4 59999998864321100 0011123556788899963 23
Q ss_pred CCccccccccccchhhHHHHHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEE
Q 000808 139 DEMVRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIIL 218 (1275)
Q Consensus 139 ~~~~~~LSGGqrqRvsiA~al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~ 218 (1275)
++.+.+|||||||||+|||||+.+|++|+|||||+|||+.++.++.+.++++.. . +++|++++|+.+++...||+|++
T Consensus 171 ~~~~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~-~-g~TiiivtHd~~~~~~~adri~v 248 (320)
T PRK13631 171 ERSPFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKA-N-NKTVFVITHTMEHVLEVADEVIV 248 (320)
T ss_pred cCCcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHH-C-CCEEEEEecCHHHHHHhCCEEEE
Confidence 345678999999999999999999999999999999999999999999998754 3 55666688888889999999999
Q ss_pred ecCCeEEEecChhhHH
Q 000808 219 LSDAQIVYQGPRELVL 234 (1275)
Q Consensus 219 l~~G~i~~~G~~~~~~ 234 (1275)
|++|++++.|+++++.
T Consensus 249 l~~G~i~~~g~~~~~~ 264 (320)
T PRK13631 249 MDKGKILKTGTPYEIF 264 (320)
T ss_pred EECCEEEEeCCHHHHh
Confidence 9999999999998764
No 429
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=99.97 E-value=2.1e-31 Score=299.85 Aligned_cols=192 Identities=21% Similarity=0.331 Sum_probs=155.6
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCcc------ccceEEEeccccccCCCCCHHHHHHHHHhc
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV------PQRTAAYISQHDVHIGEMTVRETLAFSARC 74 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~~------~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~ 74 (1275)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+||.||+.+....
T Consensus 35 ~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~ 111 (269)
T PRK11831 35 ITAIMGPSGIGKTTLLRLIGGQIAPD---HGEILFDGENIPAMSRSRLYTVRKRMSMLFQSGALFTDMNVFDNVAYPLRE 111 (269)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEccccChhhHHHHhhcEEEEecccccCCCCCHHHHHHHHHHH
Confidence 47999999999999999999999887 999999998775321 245699999998888999999999885421
Q ss_pred cCCCCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhh
Q 000808 75 QGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVT 154 (1275)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvs 154 (1275)
.. ..+ . .+....++.+++.+||++..+. .+..|||||||||+
T Consensus 112 ~~---~~~------~------------------------~~~~~~~~~~l~~~gl~~~~~~-----~~~~LSgGq~qrv~ 153 (269)
T PRK11831 112 HT---QLP------A------------------------PLLHSTVMMKLEAVGLRGAAKL-----MPSELSGGMARRAA 153 (269)
T ss_pred cc---CCC------H------------------------HHHHHHHHHHHHHcCChhhhhC-----ChhhCCHHHHHHHH
Confidence 10 000 0 0011224567888999765554 34579999999999
Q ss_pred HHHHHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhhHH
Q 000808 155 TGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVL 234 (1275)
Q Consensus 155 iA~al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~~~ 234 (1275)
|||||+.+|++++|||||+|||+.++..+.+.++++.+. ++.+|++++|+.+++.+.+|++++|++|++++.|+++++.
T Consensus 154 laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~-~g~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 232 (269)
T PRK11831 154 LARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSA-LGVTCVVVSHDVPEVLSIADHAYIVADKKIVAHGSAQALQ 232 (269)
T ss_pred HHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHh-cCcEEEEEecCHHHHHHhhCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999999987543 2456666888888999999999999999999999987764
No 430
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=2.5e-31 Score=293.39 Aligned_cols=186 Identities=23% Similarity=0.298 Sum_probs=149.6
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCccc-------cceEEEeccccccCCCCCHHHHHHHHHh
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFVP-------QRTAAYISQHDVHIGEMTVRETLAFSAR 73 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~~~-------~~~~~yv~Q~~~~~~~lTv~e~l~f~~~ 73 (1275)
+++|+||||||||||+++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++.+||+||+.+...
T Consensus 37 ~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~ 113 (233)
T PRK11629 37 MMAIVGSSGSGKSTLLHLLGGLDTPT---SGDVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPLL 113 (233)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCCHHHHHHHHhccEEEEecCcccCCCCCHHHHHHHHHH
Confidence 47999999999999999999999887 9999999988754321 2469999999888999999999998654
Q ss_pred ccCCCCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchh
Q 000808 74 CQGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRV 153 (1275)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv 153 (1275)
..+.. . .+.+..++++++.+||++..++ .+..||||||||+
T Consensus 114 ~~~~~----------~------------------------~~~~~~~~~~l~~~gl~~~~~~-----~~~~LSgG~~qrl 154 (233)
T PRK11629 114 IGKKK----------P------------------------AEINSRALEMLAAVGLEHRANH-----RPSELSGGERQRV 154 (233)
T ss_pred hcCCC----------H------------------------HHHHHHHHHHHHHcCCchhhhC-----ChhhCCHHHHHHH
Confidence 22100 0 0011234667889999765543 4567999999999
Q ss_pred hHHHHHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecCh
Q 000808 154 TTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPR 230 (1275)
Q Consensus 154 siA~al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~ 230 (1275)
+||||++.+|++++|||||+|||+.++.++.+.+++..+. ++++|+.++|+.+++.. +|++++|++|++++.|+.
T Consensus 155 ~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~-~g~tvii~sH~~~~~~~-~~~~~~l~~G~i~~~~~~ 229 (233)
T PRK11629 155 AIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRL-QGTAFLVVTHDLQLAKR-MSRQLEMRDGRLTAELSL 229 (233)
T ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHh-CCCEEEEEeCCHHHHHh-hCEEEEEECCEEEEEecc
Confidence 9999999999999999999999999999999999987543 34556667888877766 589999999999988853
No 431
>PRK15177 Vi polysaccharide export ATP-binding protein VexC; Provisional
Probab=99.97 E-value=2.4e-31 Score=288.09 Aligned_cols=193 Identities=19% Similarity=0.180 Sum_probs=152.9
Q ss_pred eeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEE-EcCccCCcccccceEEEeccCCCCCCCCCHHHH
Q 000808 705 LLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIT-ISGYPKKQETFTRISGYCEQNDIHSPFVTVYES 783 (1275)
Q Consensus 705 iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~-~~g~~~~~~~~~~~~~~v~q~~~~~~~ltv~e~ 783 (1275)
+|+|||++|++||+++|+||||||||||+++|+|..++ .+|+|. ++|... .+.+++.+++.+|++||
T Consensus 2 vl~~vs~~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~~--~sG~i~~~~~~~~----------~~~~~~~l~~~ltv~en 69 (213)
T PRK15177 2 VLDKTDFVMGYHEHIGILAAPGSGKTTLTRLLCGLDAP--DEGDFIGLRGDAL----------PLGANSFILPGLTGEEN 69 (213)
T ss_pred eeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCccC--CCCCEEEecCcee----------ccccccccCCcCcHHHH
Confidence 79999999999999999999999999999999997653 478886 666422 12345667889999999
Q ss_pred HHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHH
Q 000808 784 LLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDAR 863 (1275)
Q Consensus 784 l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~ 863 (1275)
+.+...... ...++. .+.+.+.+++.+..++.+ +.||||||||++||++|+.+|++++|||||+++|+.
T Consensus 70 l~~~~~~~~---~~~~~~---~~~~~~~~~l~~~~~~~~-----~~lS~G~~qrv~la~al~~~p~llllDEP~~~lD~~ 138 (213)
T PRK15177 70 ARMMASLYG---LDGDEF---SHFCYQLTQLEQCYTDRV-----SEYSVTMKTHLAFAINLLLPCRLYIADGKLYTGDNA 138 (213)
T ss_pred HHHHHHHcC---CCHHHH---HHHHHHHhChhHHhhchH-----hhcCHHHHHHHHHHHHHhcCCCEEEECCCCccCCHH
Confidence 988655431 222222 233445667777666665 469999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcEEEEECCCCccchHHHHHHh
Q 000808 864 AAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVGPLGRHSCHLIRYFE 927 (1275)
Q Consensus 864 ~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~~~~~~~~~~~f~ 927 (1275)
++..+.+.+.+..+ ++|+|+++|+++ .+...+|++++|.+ |++++.|+.. .+.++++
T Consensus 139 ~~~~~~~~l~~~~~-~~~ii~vsH~~~-~~~~~~d~i~~l~~-G~i~~~~~~~----~~~~~~~ 195 (213)
T PRK15177 139 TQLRMQAALACQLQ-QKGLIVLTHNPR-LIKEHCHAFGVLLH-GKITMCEDLA----QATALFE 195 (213)
T ss_pred HHHHHHHHHHHHhh-CCcEEEEECCHH-HHHHhcCeeEEEEC-CeEEEeCCHH----HHHHHHH
Confidence 99999998865443 468999999986 46678999999985 7999999873 4455544
No 432
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=1.1e-31 Score=305.33 Aligned_cols=190 Identities=22% Similarity=0.311 Sum_probs=153.2
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCC---------------------------ccccceEEEec
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDE---------------------------FVPQRTAAYIS 53 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~---------------------------~~~~~~~~yv~ 53 (1275)
+++|+||||||||||+++|+|.++|+ +|+|.++|.+... ...++.+|||+
T Consensus 35 ~v~iiG~nGsGKSTLl~~L~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~ 111 (305)
T PRK13651 35 FIAIIGQTGSGKTTFIEHLNALLLPD---TGTIEWIFKDEKNKKKTKEKEKVLEKLVIQKTRFKKIKKIKEIRRRVGVVF 111 (305)
T ss_pred EEEEECCCCCcHHHHHHHHhCCCCCC---CcEEEEeceecccccccccccccccccccccccccccchHHHHHhceEEEe
Confidence 47999999999999999999999987 8999999875421 11245799999
Q ss_pred ccc-ccCCCCCHHHHHHHHHhccCCCCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCc-c
Q 000808 54 QHD-VHIGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLE-V 131 (1275)
Q Consensus 54 Q~~-~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~ 131 (1275)
|++ ..+...||+||+.|+....+.. .++....++++++.+||+ +
T Consensus 112 Q~~~~~l~~~tv~e~i~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~gL~~~ 157 (305)
T PRK13651 112 QFAEYQLFEQTIEKDIIFGPVSMGVS----------------------------------KEEAKKRAAKYIELVGLDES 157 (305)
T ss_pred eCcccccccccHHHHHHhhHHHcCCC----------------------------------HHHHHHHHHHHHHHcCCChh
Confidence 985 3445679999999865432110 001112356788999996 3
Q ss_pred ccccccCCCccccccccccchhhHHHHHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHh
Q 000808 132 CDDTLVGDEMVRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYD 211 (1275)
Q Consensus 132 ~~~t~vg~~~~~~LSGGqrqRvsiA~al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~ 211 (1275)
..+ +.+..|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.++++.+ . +.+|++++|+.+++.+
T Consensus 158 ~~~-----~~~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~-~-g~tiiivtHd~~~~~~ 230 (305)
T PRK13651 158 YLQ-----RSPFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNK-Q-GKTIILVTHDLDNVLE 230 (305)
T ss_pred hhh-----CChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHH-C-CCEEEEEeeCHHHHHH
Confidence 333 45668999999999999999999999999999999999999999999998753 3 5566778999999999
Q ss_pred hcccEEEecCCeEEEecChhhHH
Q 000808 212 LFDDIILLSDAQIVYQGPRELVL 234 (1275)
Q Consensus 212 ~~D~ii~l~~G~i~~~G~~~~~~ 234 (1275)
.||||++|++|++++.|+++++.
T Consensus 231 ~adrv~vl~~G~i~~~g~~~~~~ 253 (305)
T PRK13651 231 WTKRTIFFKDGKIIKDGDTYDIL 253 (305)
T ss_pred hCCEEEEEECCEEEEECCHHHHh
Confidence 99999999999999999988864
No 433
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=99.97 E-value=1.6e-31 Score=297.31 Aligned_cols=198 Identities=23% Similarity=0.287 Sum_probs=154.5
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCcc------ccceEEEeccccccCCCCCHHHHHHHHHhc
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV------PQRTAAYISQHDVHIGEMTVRETLAFSARC 74 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~~------~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~ 74 (1275)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+||+||+.++...
T Consensus 30 ~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~ 106 (243)
T TIGR02315 30 FVAIIGPSGAGKSTLLRCINRLVEPS---SGSILLEGTDITKLRGKKLRKLRRRIGMIFQHYNLIERLTVLENVLHGRLG 106 (243)
T ss_pred EEEEECCCCCCHHHHHHHHhCCcCCC---ccEEEECCEEhhhCCHHHHHHHHhheEEEcCCCcccccccHHHHHhhcccc
Confidence 47999999999999999999999887 999999998865321 245799999998889999999999874311
Q ss_pred cCCCCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhh
Q 000808 75 QGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVT 154 (1275)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvs 154 (1275)
.. ... ..... . ...+....++++++.+||.+..+ +.+..|||||||||+
T Consensus 107 ~~--~~~---~~~~~------~---------------~~~~~~~~~~~~l~~~~l~~~~~-----~~~~~LSgG~~qrv~ 155 (243)
T TIGR02315 107 YK--PTW---RSLLG------R---------------FSEEDKERALSALERVGLADKAY-----QRADQLSGGQQQRVA 155 (243)
T ss_pred cc--cch---hhhhc------c---------------ccHHHHHHHHHHHHHcCcHhhhc-----CCcccCCHHHHHHHH
Confidence 00 000 00000 0 00011123566788899975544 345679999999999
Q ss_pred HHHHHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhhH
Q 000808 155 TGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELV 233 (1275)
Q Consensus 155 iA~al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~~ 233 (1275)
|||||+.+|++++|||||+|||+.++..+.+.|+++.+.. +.+|++++|+.+++.++||++++|++|++++.|+++++
T Consensus 156 la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 233 (243)
T TIGR02315 156 IARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKED-GITVIINLHQVDLAKKYADRIVGLKAGEIVFDGAPSEL 233 (243)
T ss_pred HHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHhcCeEEEEECCEEEecCCHHHh
Confidence 9999999999999999999999999999999999875432 45666688888889999999999999999999987764
No 434
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=99.97 E-value=3.2e-31 Score=293.12 Aligned_cols=191 Identities=24% Similarity=0.353 Sum_probs=153.3
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCcc--ccceEEEeccccccCCCCCHHHHHHHHHhccCCC
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV--PQRTAAYISQHDVHIGEMTVRETLAFSARCQGVG 78 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~~--~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~ 78 (1275)
+++|+||||||||||+++|+|..+|+ +|+|.++|.++.... ..+.++|++|++.+++.+|++||+.+.....+..
T Consensus 29 ~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~i~~~~~~~~~~i~~~~q~~~~~~~~t~~~~l~~~~~~~~~~ 105 (236)
T TIGR03864 29 FVALLGPNGAGKSTLFSLLTRLYVAQ---EGQISVAGHDLRRAPRAALARLGVVFQQPTLDLDLSVRQNLRYHAALHGLS 105 (236)
T ss_pred EEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCEEcccCChhhhhhEEEeCCCCCCcccCcHHHHHHHHHHhcCCC
Confidence 47999999999999999999999887 999999998765322 2257999999988888999999998754322100
Q ss_pred CcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhhHHHH
Q 000808 79 SRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEM 158 (1275)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~a 158 (1275)
. .+....++++++.+||++..++. +..||||||||++||||
T Consensus 106 -------~---------------------------~~~~~~~~~~l~~~gl~~~~~~~-----~~~LS~G~~qrl~lara 146 (236)
T TIGR03864 106 -------R---------------------------AEARERIAALLARLGLAERADDK-----VRELNGGHRRRVEIARA 146 (236)
T ss_pred -------H---------------------------HHHHHHHHHHHHHcCChhhhcCC-----hhhCCHHHHHHHHHHHH
Confidence 0 00111345678888997655543 45799999999999999
Q ss_pred HhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhhHHH
Q 000808 159 MVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVLD 235 (1275)
Q Consensus 159 l~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~~~~ 235 (1275)
|+.+|++++|||||+|||+.++..+.+.++++++.. +.++++++|+.+++.. +|++++|++|++++.|+++++.+
T Consensus 147 l~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~-~~tiii~sH~~~~~~~-~d~i~~l~~G~i~~~~~~~~~~~ 221 (236)
T TIGR03864 147 LLHRPALLLLDEPTVGLDPASRAAIVAHVRALCRDQ-GLSVLWATHLVDEIEA-DDRLVVLHRGRVLADGAAAELRG 221 (236)
T ss_pred HhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhC-CCEEEEEecChhhHhh-CCEEEEEeCCeEEEeCCHHHHHH
Confidence 999999999999999999999999999999876433 4556667888877764 99999999999999998877653
No 435
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=2.9e-31 Score=299.81 Aligned_cols=190 Identities=21% Similarity=0.313 Sum_probs=153.8
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCcc---ccceEEEeccccc-cCCCCCHHHHHHHHHhccC
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV---PQRTAAYISQHDV-HIGEMTVRETLAFSARCQG 76 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~~---~~~~~~yv~Q~~~-~~~~lTv~e~l~f~~~~~~ 76 (1275)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++. .++..||+||+.|+....+
T Consensus 35 ~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~~tv~eni~~~~~~~~ 111 (279)
T PRK13650 35 WLSIIGHNGSGKSTTVRLIDGLLEAE---SGQIIIDGDLLTEENVWDIRHKIGMVFQNPDNQFVGATVEDDVAFGLENKG 111 (279)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECCcCcHHHHHhhceEEEcChHHhcccccHHHHHHhhHHhCC
Confidence 47999999999999999999999987 999999999875422 2457999999863 6778899999998643221
Q ss_pred CCCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhhHH
Q 000808 77 VGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTG 156 (1275)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA 156 (1275)
.. ..+....++++++.+||++..+. .+..||||||||++||
T Consensus 112 ~~----------------------------------~~~~~~~~~~~l~~~gL~~~~~~-----~~~~LSgGq~qrv~lA 152 (279)
T PRK13650 112 IP----------------------------------HEEMKERVNEALELVGMQDFKER-----EPARLSGGQKQRVAIA 152 (279)
T ss_pred CC----------------------------------HHHHHHHHHHHHHHCCCHhHhhC-----CcccCCHHHHHHHHHH
Confidence 10 00111235668899999765543 4567999999999999
Q ss_pred HHHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhhHH
Q 000808 157 EMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVL 234 (1275)
Q Consensus 157 ~al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~~~ 234 (1275)
|||+.+|++|+|||||+|||+.++..+.+.++++++.. +++|++++|+.+++ ..+|++++|++|+++..|+++++.
T Consensus 153 ral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~-g~tilivtH~~~~~-~~~dri~~l~~G~i~~~g~~~~~~ 228 (279)
T PRK13650 153 GAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDY-QMTVISITHDLDEV-ALSDRVLVMKNGQVESTSTPRELF 228 (279)
T ss_pred HHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEecCHHHH-HhCCEEEEEECCEEEEECCHHHHH
Confidence 99999999999999999999999999999999876532 45566677877777 579999999999999999988765
No 436
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=99.97 E-value=2.7e-31 Score=292.35 Aligned_cols=194 Identities=23% Similarity=0.255 Sum_probs=154.4
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCC----CCceeEEEEECCccCCCccc-cceEEEeccccc--cCCCCCHHHHHHHHHh
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDS----KLKFSGRVTYNGHGMDEFVP-QRTAAYISQHDV--HIGEMTVRETLAFSAR 73 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~----~~~~~G~v~~~g~~~~~~~~-~~~~~yv~Q~~~--~~~~lTv~e~l~f~~~ 73 (1275)
+++|+||||||||||+++|+|.++| + +|+|.++|+++..... ++.++|++|++. +.+.+|+.||+.+...
T Consensus 14 ~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~~~t~~~~~~~~~~ 90 (230)
T TIGR02770 14 VLALVGESGSGKSLTCLAILGLLPPGLTQT---SGEILLDGRPLLPLSIRGRHIATIMQNPRTAFNPLFTMGNHAIETLR 90 (230)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCccCcc---ccEEEECCEechhhhhhhheeEEEecCchhhcCcccCHHHHHHHHHH
Confidence 4799999999999999999999987 5 8999999988754333 257999999974 5567899999987543
Q ss_pred ccCCCCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchh
Q 000808 74 CQGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRV 153 (1275)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv 153 (1275)
..+.. . .+....++++++.+||++. +...++.+..|||||||||
T Consensus 91 ~~~~~------~----------------------------~~~~~~~~~~l~~~~l~~~--~~~~~~~~~~LS~G~~qrv 134 (230)
T TIGR02770 91 SLGKL------S----------------------------KQARALILEALEAVGLPDP--EEVLKKYPFQLSGGMLQRV 134 (230)
T ss_pred HcCcc------H----------------------------HHHHHHHHHHHHHcCCCch--HHHHhCChhhcCHHHHHHH
Confidence 21100 0 0011235668888999743 1122445668999999999
Q ss_pred hHHHHHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhhH
Q 000808 154 TTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELV 233 (1275)
Q Consensus 154 siA~al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~~ 233 (1275)
+||||++.+|++++|||||+|||+.++..+.+.++++.+. .+++|++++|+.+++..++|++++|++|+++..|+++++
T Consensus 135 ~laral~~~p~vllLDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 213 (230)
T TIGR02770 135 MIALALLLEPPFLIADEPTTDLDVVNQARVLKLLRELRQL-FGTGILLITHDLGVVARIADEVAVMDDGRIVERGTVKEI 213 (230)
T ss_pred HHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999987543 345666688888899999999999999999999998776
Q ss_pred H
Q 000808 234 L 234 (1275)
Q Consensus 234 ~ 234 (1275)
.
T Consensus 214 ~ 214 (230)
T TIGR02770 214 F 214 (230)
T ss_pred H
Confidence 4
No 437
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=99.97 E-value=2.5e-31 Score=296.96 Aligned_cols=190 Identities=23% Similarity=0.318 Sum_probs=154.3
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCc-----------cccceEEEeccccccCCCCCHHHHHH
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEF-----------VPQRTAAYISQHDVHIGEMTVRETLA 69 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~-----------~~~~~~~yv~Q~~~~~~~lTv~e~l~ 69 (1275)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++|++|++.+++..||+||+.
T Consensus 31 ~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~ 107 (250)
T PRK11264 31 VVAIIGPSGSGKTTLLRCINLLEQPE---AGTIRVGDITIDTARSLSQQKGLIRQLRQHVGFVFQNFNLFPHRTVLENII 107 (250)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEccccccccchhhHHHHhhhhEEEEecCcccCCCCCHHHHHH
Confidence 47999999999999999999999887 89999999876431 12457999999988888899999998
Q ss_pred HHHhc-cCCCCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCcccccccc
Q 000808 70 FSARC-QGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGG 148 (1275)
Q Consensus 70 f~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGG 148 (1275)
++... ++.. . .+....++++++.+||++..+ +.++.||||
T Consensus 108 ~~~~~~~~~~-------~---------------------------~~~~~~~~~~l~~~gl~~~~~-----~~~~~LS~G 148 (250)
T PRK11264 108 EGPVIVKGEP-------K---------------------------EEATARARELLAKVGLAGKET-----SYPRRLSGG 148 (250)
T ss_pred HHHHHhcCCC-------H---------------------------HHHHHHHHHHHHHcCCcchhh-----CChhhCChH
Confidence 75321 1100 0 001123456788899976544 345679999
Q ss_pred ccchhhHHHHHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEec
Q 000808 149 QKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQG 228 (1275)
Q Consensus 149 qrqRvsiA~al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G 228 (1275)
|||||+|||||+.+|++++|||||+|||+.++..+.+.++++.+ . +.++++++|+.+++.+++|++++|++|++++.|
T Consensus 149 q~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~ 226 (250)
T PRK11264 149 QQQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQ-E-KRTMVIVTHEMSFARDVADRAIFMDQGRIVEQG 226 (250)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHh-c-CCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeC
Confidence 99999999999999999999999999999999999999998754 2 455666788888999999999999999999999
Q ss_pred ChhhHH
Q 000808 229 PRELVL 234 (1275)
Q Consensus 229 ~~~~~~ 234 (1275)
+++++.
T Consensus 227 ~~~~~~ 232 (250)
T PRK11264 227 PAKALF 232 (250)
T ss_pred CHHHHh
Confidence 887763
No 438
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=99.97 E-value=3.1e-31 Score=304.72 Aligned_cols=199 Identities=20% Similarity=0.189 Sum_probs=160.3
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCccc-------cceEEEecccc--ccCCCCCHHHHHHHH
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFVP-------QRTAAYISQHD--VHIGEMTVRETLAFS 71 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~~~-------~~~~~yv~Q~~--~~~~~lTv~e~l~f~ 71 (1275)
+++|+|+||||||||+++|+|.++|+...+|+|.++|.++..... ++.++||+|++ .+.+.+|+.+++.+.
T Consensus 44 ~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~ 123 (330)
T PRK09473 44 TLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKELNKLRAEQISMIFQDPMTSLNPYMRVGEQLMEV 123 (330)
T ss_pred EEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHHHHHHhcCCEEEEEcCchhhcCCCCCHHHHHHHH
Confidence 479999999999999999999998742248999999998754321 14799999997 678899999999875
Q ss_pred HhccCCCCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccc
Q 000808 72 ARCQGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKK 151 (1275)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrq 151 (1275)
...... . . ..+....+.++++.+||++..+. -++.+++|||||||
T Consensus 124 ~~~~~~-~--------~------------------------~~~~~~~~~~~L~~vgL~~~~~~--~~~~p~~LSgG~~Q 168 (330)
T PRK09473 124 LMLHKG-M--------S------------------------KAEAFEESVRMLDAVKMPEARKR--MKMYPHEFSGGMRQ 168 (330)
T ss_pred HHHhcC-C--------C------------------------HHHHHHHHHHHHHHcCCCChHHH--hcCCcccCCHHHHH
Confidence 433210 0 0 00111235667888999754322 24677899999999
Q ss_pred hhhHHHHHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChh
Q 000808 152 RVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRE 231 (1275)
Q Consensus 152 RvsiA~al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~ 231 (1275)
||+|||||+.+|+++++||||+|||+.++.++.+.|+++.+. .+.++++++|+...+.+++|+|++|++|++++.|+.+
T Consensus 169 Rv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~-~g~til~iTHdl~~~~~~~Dri~vm~~G~ive~g~~~ 247 (330)
T PRK09473 169 RVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKRE-FNTAIIMITHDLGVVAGICDKVLVMYAGRTMEYGNAR 247 (330)
T ss_pred HHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHH-cCCEEEEEECCHHHHHHhCCEEEEEECCEEEEECCHH
Confidence 999999999999999999999999999999999999988654 3566777899999999999999999999999999998
Q ss_pred hHHH
Q 000808 232 LVLD 235 (1275)
Q Consensus 232 ~~~~ 235 (1275)
++.+
T Consensus 248 ~i~~ 251 (330)
T PRK09473 248 DVFY 251 (330)
T ss_pred HHHh
Confidence 8753
No 439
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=99.97 E-value=2.5e-31 Score=292.14 Aligned_cols=190 Identities=23% Similarity=0.273 Sum_probs=151.9
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCccccceEEEeccccccCCCCCHHHHHHHHHhccCCCCc
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFVPQRTAAYISQHDVHIGEMTVRETLAFSARCQGVGSR 80 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~ 80 (1275)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ..+|++|++.+++.+||.||+.++..... . .
T Consensus 13 ~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~--~~~~v~q~~~l~~~~tv~e~l~~~~~~~~-~-~ 85 (230)
T TIGR01184 13 FISLIGHSGCGKSTLLNLISGLAQPT---SGGVILEGKQITEPGP--DRMVVFQNYSLLPWLTVRENIALAVDRVL-P-D 85 (230)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCCh--hheEEecCcccCCCCCHHHHHHHHHHhcc-c-C
Confidence 47999999999999999999999887 9999999988754322 24899999999999999999988532100 0 0
Q ss_pred chhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhhHHHHHh
Q 000808 81 YDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEMMV 160 (1275)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~al~ 160 (1275)
.+ . .+....++++++.+||++..++ .+..||||||||++|||||+
T Consensus 86 ~~------~------------------------~~~~~~~~~~l~~~~l~~~~~~-----~~~~LSgG~~qrv~la~al~ 130 (230)
T TIGR01184 86 LS------K------------------------SERRAIVEEHIALVGLTEAADK-----RPGQLSGGMKQRVAIARALS 130 (230)
T ss_pred CC------H------------------------HHHHHHHHHHHHHcCCHHHHcC-----ChhhCCHHHHHHHHHHHHHH
Confidence 00 0 0011234667888999765554 34579999999999999999
Q ss_pred cCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhhH
Q 000808 161 GPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELV 233 (1275)
Q Consensus 161 ~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~~ 233 (1275)
.+|++++|||||+|||+.++.++.+.+++..+.. +.+|+.++|+.+++.+.+|++++|++|++++.|+..++
T Consensus 131 ~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~~-~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 202 (230)
T TIGR01184 131 IRPKVLLLDEPFGALDALTRGNLQEELMQIWEEH-RVTVLMVTHDVDEALLLSDRVVMLTNGPAANIGQILEV 202 (230)
T ss_pred cCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhcCEEEEEeCCcEecccCceec
Confidence 9999999999999999999999999999876533 45566678888899999999999999999998865443
No 440
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=1.9e-31 Score=302.45 Aligned_cols=190 Identities=18% Similarity=0.254 Sum_probs=153.9
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCc-------cccceEEEecccc--ccCCCCCHHHHHHHH
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEF-------VPQRTAAYISQHD--VHIGEMTVRETLAFS 71 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~-------~~~~~~~yv~Q~~--~~~~~lTv~e~l~f~ 71 (1275)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.+|||+|++ .+++ .||.||+.|+
T Consensus 35 ~~~i~G~nGsGKSTLl~~L~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~~l~~-~tv~e~i~~~ 110 (286)
T PRK13646 35 YYAIVGQTGSGKSTLIQNINALLKPT---TGTVTVDDITITHKTKDKYIRPVRKRIGMVFQFPESQLFE-DTVEREIIFG 110 (286)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhheEEEecChHhccch-hhHHHHHHhh
Confidence 47999999999999999999999987 99999999887432 1346799999985 3444 5999999986
Q ss_pred HhccCCCCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCc-cccccccCCCcccccccccc
Q 000808 72 ARCQGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLE-VCDDTLVGDEMVRGISGGQK 150 (1275)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~~t~vg~~~~~~LSGGqr 150 (1275)
....+.. . .+....++++++.+||. +..+ +.+..||||||
T Consensus 111 ~~~~~~~----------~------------------------~~~~~~~~~~l~~~gL~~~~~~-----~~~~~LSgGq~ 151 (286)
T PRK13646 111 PKNFKMN----------L------------------------DEVKNYAHRLLMDLGFSRDVMS-----QSPFQMSGGQM 151 (286)
T ss_pred HHHcCCC----------H------------------------HHHHHHHHHHHHHcCCChhhhh-----CCcccCCHHHH
Confidence 4321110 0 01112356678889996 3444 44568999999
Q ss_pred chhhHHHHHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecCh
Q 000808 151 KRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPR 230 (1275)
Q Consensus 151 qRvsiA~al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~ 230 (1275)
|||+|||||+.+|++++|||||+|||+.++.++.+.++++.+. .+++|++++|+.+++.+.+|++++|++|++++.|++
T Consensus 152 qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~-~g~tvl~vtH~~~~~~~~~dri~~l~~G~i~~~g~~ 230 (286)
T PRK13646 152 RKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTD-ENKTIILVSHDMNEVARYADEVIVMKEGSIVSQTSP 230 (286)
T ss_pred HHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHh-CCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCH
Confidence 9999999999999999999999999999999999999987543 356677789999899999999999999999999998
Q ss_pred hhHH
Q 000808 231 ELVL 234 (1275)
Q Consensus 231 ~~~~ 234 (1275)
+++.
T Consensus 231 ~~~~ 234 (286)
T PRK13646 231 KELF 234 (286)
T ss_pred HHHH
Confidence 8764
No 441
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=99.97 E-value=2.6e-31 Score=294.78 Aligned_cols=190 Identities=19% Similarity=0.324 Sum_probs=154.6
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCc-----cccceEEEeccccccCCCCCHHHHHHHHHh-c
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEF-----VPQRTAAYISQHDVHIGEMTVRETLAFSAR-C 74 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~-----~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~-~ 74 (1275)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++|++|++.+++.+||+||+.++.. .
T Consensus 29 ~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~ 105 (240)
T PRK09493 29 VVVIIGPSGSGKSTLLRCINKLEEIT---SGDLIVDGLKVNDPKVDERLIRQEAGMVFQQFYLFPHLTALENVMFGPLRV 105 (240)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCChhHHHHhhceEEEecccccCCCCcHHHHHHhHHHHh
Confidence 47999999999999999999999887 99999999887532 124579999999888889999999987532 1
Q ss_pred cCCCCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhh
Q 000808 75 QGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVT 154 (1275)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvs 154 (1275)
.+. + . .+....++++++.+||++..+. .++.||||||||++
T Consensus 106 ~~~----~------~------------------------~~~~~~~~~~l~~~gl~~~~~~-----~~~~LS~G~~qrv~ 146 (240)
T PRK09493 106 RGA----S------K------------------------EEAEKQARELLAKVGLAERAHH-----YPSELSGGQQQRVA 146 (240)
T ss_pred cCC----C------H------------------------HHHHHHHHHHHHHcCChHHHhc-----ChhhcCHHHHHHHH
Confidence 100 0 0 0011234667888999755443 45679999999999
Q ss_pred HHHHHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhhHH
Q 000808 155 TGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVL 234 (1275)
Q Consensus 155 iA~al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~~~ 234 (1275)
||||++.+|++++|||||+|||+.++.++.+.++++.+ . +++|++++|+.+++..++|++++|++|++++.|+.+++.
T Consensus 147 la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~-~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 224 (240)
T PRK09493 147 IARALAVKPKLMLFDEPTSALDPELRHEVLKVMQDLAE-E-GMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGDPQVLI 224 (240)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-c-CCEEEEEeCCHHHHHHhCCEEEEEECCEEEeeCCHHHHh
Confidence 99999999999999999999999999999999998753 3 455666788888999999999999999999999887764
No 442
>TIGR01194 cyc_pep_trnsptr cyclic peptide transporter. This model describes cyclic peptide transporter in bacteria. Bacteria have elaborate pathways for the production of toxins and secondary metabolites. Many such compounds, including syringomycin and pyoverdine are synthesized on non-ribosomal templates consisting of a multienzyme complex. On several occasions the proteins of the complex and transporter protein are present on the same operon. Often times these compounds cross the biological membrane by specific transporters. Syringomycin is an amphipathic, cylclic lipodepsipeptide when inserted into host causes formation of channels, permeable to variety of cations. On the other hand, pyoverdine is a cyclic octa-peptidyl dihydroxyquinoline, which is efficient in sequestering iron for uptake.
Probab=99.97 E-value=3.8e-31 Score=328.02 Aligned_cols=210 Identities=17% Similarity=0.230 Sum_probs=167.8
Q ss_pred cEEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCcc
Q 000808 676 HSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 755 (1275)
Q Consensus 676 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~ 755 (1275)
..++++|++++++... ..++++|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.+||.+
T Consensus 336 ~~i~~~~v~f~y~~~~--------~~~~~~l~~vs~~i~~G~~~aivG~sGsGKSTl~~ll~g~~~--p~~G~i~~~g~~ 405 (555)
T TIGR01194 336 DSIELKDVHMNPKAPE--------GSEGFALGPIDLRIAQGDIVFIVGENGCGKSTLAKLFCGLYI--PQEGEILLDGAA 405 (555)
T ss_pred ceEEEEEEEEEeCCCC--------CCcCceeccceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEE
Confidence 4699999999985210 012359999999999999999999999999999999999766 358999999998
Q ss_pred CCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccc-cCCCCCCCC
Q 000808 756 KKQ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLV-GLPGESGLS 831 (1275)
Q Consensus 756 ~~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~-~~~~~~~lS 831 (1275)
+.. ..+++.++||+|++.++. -|++||. . + +..++.++++++.+++.+..+... |......||
T Consensus 406 i~~~~~~~~~~~i~~v~q~~~lf~-~ti~~n~------~-~-----~~~~~~~~~~~~~~~l~~~~~~lp~g~~t~~~LS 472 (555)
T TIGR01194 406 VSADSRDDYRDLFSAIFADFHLFD-DLIGPDE------G-E-----HASLDNAQQYLQRLEIADKVKIEDGGFSTTTALS 472 (555)
T ss_pred CCCCCHHHHHhhCcEEccChhhhh-hhhhccc------c-c-----chhHHHHHHHHHHcCCchhhcccccccCCcccCC
Confidence 754 345678999999988775 4777773 1 1 123345778899999876554332 222235799
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHH-HHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcEEE
Q 000808 832 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVR-NTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQEI 910 (1275)
Q Consensus 832 gGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~-~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~ 910 (1275)
||||||++|||||+++|++++||||||+||++++..+.+.+. .+..+|+|+|+++|+++ ..+.+|++++|++ |+++
T Consensus 473 gGq~qRlalaRall~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tiiiisH~~~--~~~~~d~i~~l~~-G~i~ 549 (555)
T TIGR01194 473 TGQQKRLALICAWLEDRPILLFDEWAADQDPAFKRFFYEELLPDLKRQGKTIIIISHDDQ--YFELADQIIKLAA-GCIV 549 (555)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHH--HHHhCCEEEEEEC-CEEE
Confidence 999999999999999999999999999999999999988664 45456899999999975 5678999999986 6765
Q ss_pred E
Q 000808 911 Y 911 (1275)
Q Consensus 911 ~ 911 (1275)
.
T Consensus 550 ~ 550 (555)
T TIGR01194 550 K 550 (555)
T ss_pred E
Confidence 4
No 443
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.97 E-value=3.6e-31 Score=288.24 Aligned_cols=183 Identities=28% Similarity=0.412 Sum_probs=149.3
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCc-------cccceEEEeccccccCCCCCHHHHHHHHHh
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEF-------VPQRTAAYISQHDVHIGEMTVRETLAFSAR 73 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~-------~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~ 73 (1275)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++|++|++.+++.+|++||+.+...
T Consensus 25 ~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~~~l~~~~~ 101 (214)
T cd03297 25 VTGIFGASGAGKSTLLRCIAGLEKPD---GGTIVLNGTVLFDSRKKINLPPQQRKIGLVFQQYALFPHLNVRENLAFGLK 101 (214)
T ss_pred eEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEecccccchhhhhhHhhcEEEEecCCccCCCCCHHHHHHHHHh
Confidence 47999999999999999999999887 99999999876421 124579999999988889999999987542
Q ss_pred ccCCCCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchh
Q 000808 74 CQGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRV 153 (1275)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv 153 (1275)
... + . ..+..++++++.+||++..+ +.+..||||||||+
T Consensus 102 ~~~-----~------~-------------------------~~~~~~~~~l~~~~l~~~~~-----~~~~~LS~G~~qrv 140 (214)
T cd03297 102 RKR-----N------R-------------------------EDRISVDELLDLLGLDHLLN-----RYPAQLSGGEKQRV 140 (214)
T ss_pred hCC-----H------H-------------------------HHHHHHHHHHHHcCCHhHhh-----cCcccCCHHHHHHH
Confidence 100 0 0 00112456788889875444 34567999999999
Q ss_pred hHHHHHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEec
Q 000808 154 TTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQG 228 (1275)
Q Consensus 154 siA~al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G 228 (1275)
+||||++.+|++++|||||+|||+.++..+.+.++++++.. +++|++++|+.+++.+.+|++++|++|++++.|
T Consensus 141 ~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g 214 (214)
T cd03297 141 ALARALAAQPELLLLDEPFSALDRALRLQLLPELKQIKKNL-NIPVIFVTHDLSEAEYLADRIVVMEDGRLQYIG 214 (214)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHc-CcEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 99999999999999999999999999999999999876532 455666888888999999999999999998765
No 444
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.97 E-value=2.7e-31 Score=288.67 Aligned_cols=185 Identities=24% Similarity=0.344 Sum_probs=150.0
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCcc-ccceEEEeccccccCCCCCHHHHHHHHHhccCCCC
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV-PQRTAAYISQHDVHIGEMTVRETLAFSARCQGVGS 79 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~~-~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~ 79 (1275)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+||+||+.++..... .
T Consensus 26 ~~~l~G~nGsGKSTLl~~l~gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~-~- 100 (211)
T cd03298 26 ITAIVGPSGSGKSTLLNLIAGFETPQ---SGRVLINGVDVTAAPPADRPVSMLFQENNLFAHLTVEQNVGLGLSPGL-K- 100 (211)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcCcCCHhHccEEEEecccccCCCCcHHHHHhccccccc-C-
Confidence 47999999999999999999999887 999999998875432 24579999999998989999999987532110 0
Q ss_pred cchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhhHHHHH
Q 000808 80 RYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEMM 159 (1275)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~al 159 (1275)
. . .+.+..++++++.+||.+..++. +..||||||||++||||+
T Consensus 101 -~---~----------------------------~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~ia~al 143 (211)
T cd03298 101 -L---T----------------------------AEDRQAIEVALARVGLAGLEKRL-----PGELSGGERQRVALARVL 143 (211)
T ss_pred -c---c----------------------------HHHHHHHHHHHHHcCCHHHHhCC-----cccCCHHHHHHHHHHHHH
Confidence 0 0 00112346678888987655543 457999999999999999
Q ss_pred hcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEec
Q 000808 160 VGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQG 228 (1275)
Q Consensus 160 ~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G 228 (1275)
+.+|++++|||||+|||+.++..+.+.++++.+. .+.+|+.++|+.+++.+++|++++|++|++++.|
T Consensus 144 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~-~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 144 VRDKPVLLLDEPFAALDPALRAEMLDLVLDLHAE-TKMTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 9999999999999999999999999999987543 2455666889899999999999999999998754
No 445
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=99.97 E-value=5.4e-31 Score=289.30 Aligned_cols=187 Identities=33% Similarity=0.517 Sum_probs=147.1
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCC---CCCceeEEEEECCccCCCccccceEEEeccccccCCCCCHHHHHHHHHhccCC
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLD---SKLKFSGRVTYNGHGMDEFVPQRTAAYISQHDVHIGEMTVRETLAFSARCQGV 77 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~---~~~~~~G~v~~~g~~~~~~~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~ 77 (1275)
+++|+||||||||||+++|+|.++ |+ +|+|.++|.++.....++.++|++|++.+++.+||+||+.+++.....
T Consensus 35 ~~~l~G~nGsGKSTLlk~l~G~~~~~~~~---~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~ 111 (226)
T cd03234 35 VMAILGSSGSGKTTLLDAISGRVEGGGTT---SGQILFNGQPRKPDQFQKCVAYVRQDDILLPGLTVRETLTYTAILRLP 111 (226)
T ss_pred EEEEECCCCCCHHHHHHHHhCccCCCCCC---ceEEEECCEECChHHhcccEEEeCCCCccCcCCcHHHHHHHHHHhhcc
Confidence 479999999999999999999998 65 999999998875444567899999999999999999999986543211
Q ss_pred CCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHH-HHHHhCCccccccccCCCccccccccccchhhHH
Q 000808 78 GSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDY-YLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTG 156 (1275)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA 156 (1275)
.... .. ......+. .++.+++.+.. ++.++.|||||||||+||
T Consensus 112 ~~~~---~~----------------------------~~~~~~~~~~l~~~~l~~~~-----~~~~~~LS~G~~qrl~la 155 (226)
T cd03234 112 RKSS---DA----------------------------IRKKRVEDVLLRDLALTRIG-----GNLVKGISGGERRRVSIA 155 (226)
T ss_pred cccc---hH----------------------------HHHHHHHHHHHHhhcchhhh-----cccccCcCHHHHHHHHHH
Confidence 0000 00 00011222 67777776444 345568999999999999
Q ss_pred HHHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCC-hhHHhhcccEEEecCCeEEEec
Q 000808 157 EMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPA-PETYDLFDDIILLSDAQIVYQG 228 (1275)
Q Consensus 157 ~al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~-~~~~~~~D~ii~l~~G~i~~~G 228 (1275)
|||+.+|++++|||||+|||+.++.++.+.+++..+ .+.+ +++++|.. .++.+.+|++++|++|++++.|
T Consensus 156 ral~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~-~~~t-iii~sh~~~~~~~~~~d~i~~l~~G~i~~~g 226 (226)
T cd03234 156 VQLLWDPKVLILDEPTSGLDSFTALNLVSTLSQLAR-RNRI-VILTIHQPRSDLFRLFDRILLLSSGEIVYSG 226 (226)
T ss_pred HHHHhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHH-CCCE-EEEEecCCCHHHHHhCCEEEEEeCCEEEecC
Confidence 999999999999999999999999999999998754 3344 44456665 6899999999999999998875
No 446
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=99.97 E-value=3e-31 Score=289.21 Aligned_cols=179 Identities=27% Similarity=0.372 Sum_probs=145.9
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCcc------ccceEEEeccccccCCCCCHHHHHHHHHhc
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV------PQRTAAYISQHDVHIGEMTVRETLAFSARC 74 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~~------~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~ 74 (1275)
+++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.+||.||+.++...
T Consensus 30 ~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~ 106 (214)
T TIGR02673 30 FLFLTGPSGAGKTTLLKLLYGALTPS---RGQVRIAGEDVNRLRGRQLPLLRRRIGVVFQDFRLLPDRTVYENVALPLEV 106 (214)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcccCCHHHHHHHHhheEEEecChhhccCCcHHHHHHHHHHH
Confidence 47999999999999999999999887 999999998875432 245799999999888899999999986542
Q ss_pred cCCCCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhh
Q 000808 75 QGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVT 154 (1275)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvs 154 (1275)
.+.. . .+.+..++++++.+||++..++ .+..|||||||||+
T Consensus 107 ~~~~-------~---------------------------~~~~~~~~~~l~~~~l~~~~~~-----~~~~LS~G~~qrl~ 147 (214)
T TIGR02673 107 RGKK-------E---------------------------REIQRRVGAALRQVGLEHKADA-----FPEQLSGGEQQRVA 147 (214)
T ss_pred cCCC-------H---------------------------HHHHHHHHHHHHHcCChhhhhC-----ChhhCCHHHHHHHH
Confidence 2100 0 0011234667888898764443 34579999999999
Q ss_pred HHHHHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCe
Q 000808 155 TGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQ 223 (1275)
Q Consensus 155 iA~al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~ 223 (1275)
|||||+.+|++++|||||+|||+.++.++.+.++++.+ . +.+|+.++|+.+++.++||++++|++|+
T Consensus 148 la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tii~~tH~~~~~~~~~d~i~~l~~G~ 214 (214)
T TIGR02673 148 IARAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNK-R-GTTVIVATHDLSLVDRVAHRVIILDDGR 214 (214)
T ss_pred HHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-c-CCEEEEEeCCHHHHHHhcCEEEEecCCC
Confidence 99999999999999999999999999999999998754 3 4556667888889999999999999985
No 447
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=6.4e-31 Score=324.86 Aligned_cols=205 Identities=23% Similarity=0.345 Sum_probs=166.0
Q ss_pred EEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCC
Q 000808 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1275)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 757 (1275)
++++|+++++. ++++|+|+||+|++||+++|+|||||||||||++|+|..++ .+|+|.++|.
T Consensus 2 l~i~~ls~~~~-------------~~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p--~~G~i~~~~~--- 63 (530)
T PRK15064 2 LSTANITMQFG-------------AKPLFENISVKFGGGNRYGLIGANGCGKSTFMKILGGDLEP--SAGNVSLDPN--- 63 (530)
T ss_pred EEEEEEEEEeC-------------CcEeEeCCEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEecCC---
Confidence 57889988773 24699999999999999999999999999999999997653 4799999873
Q ss_pred cccccceEEEeccCCCCCCCCCHHHHHHHHHh-c-----------cCCC---C--------------CCHHHHHHHHHHH
Q 000808 758 QETFTRISGYCEQNDIHSPFVTVYESLLYSAW-L-----------RLPP---E--------------VDSETQKMFIEEI 808 (1275)
Q Consensus 758 ~~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~-l-----------~~~~---~--------------~~~~~~~~~~~~~ 808 (1275)
+.+||++|++.+++.+||+|++.++.. . ..+. . ....+.+++++++
T Consensus 64 -----~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (530)
T PRK15064 64 -----ERLGKLRQDQFAFEEFTVLDTVIMGHTELWEVKQERDRIYALPEMSEEDGMKVADLEVKFAEMDGYTAEARAGEL 138 (530)
T ss_pred -----CEEEEEeccCCcCCCCcHHHHHHHhhHHHHHHHHHHHHHhcccccccchHHHHHHHHHHHHhcCchhHHHHHHHH
Confidence 347999999988899999999976421 0 0000 0 0001223567889
Q ss_pred HHHcCCCccc-cccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEec
Q 000808 809 MELVELNPLR-QSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIH 887 (1275)
Q Consensus 809 l~~l~l~~~~-~~~~~~~~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H 887 (1275)
++.+|+.+.. +..+ ..|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|++ .|.|||+++|
T Consensus 139 l~~~gl~~~~~~~~~-----~~LSgGq~qrv~lA~aL~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~---~~~tiiivsH 210 (530)
T PRK15064 139 LLGVGIPEEQHYGLM-----SEVAPGWKLRVLLAQALFSNPDILLLDEPTNNLDINTIRWLEDVLNE---RNSTMIIISH 210 (530)
T ss_pred HHhCCCChhHhcCch-----hhcCHHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHHh---CCCeEEEEeC
Confidence 9999997543 3333 46999999999999999999999999999999999999999999864 4899999999
Q ss_pred CCCHHHHHhhhhhheeecCcEE-EEECCC
Q 000808 888 QPSIDIFESFDELFLMKRGGQE-IYVGPL 915 (1275)
Q Consensus 888 ~~~~~~~~~~d~~~~l~~gg~~-~~~g~~ 915 (1275)
+++ .+.+.+|++++|++ |++ ++.|+.
T Consensus 211 d~~-~~~~~~d~i~~l~~-g~i~~~~g~~ 237 (530)
T PRK15064 211 DRH-FLNSVCTHMADLDY-GELRVYPGNY 237 (530)
T ss_pred CHH-HHHhhcceEEEEeC-CEEEEecCCH
Confidence 986 56788999999996 677 588876
No 448
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=3.1e-31 Score=300.93 Aligned_cols=190 Identities=23% Similarity=0.321 Sum_probs=153.0
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCc-------cccceEEEeccccc-cCCCCCHHHHHHHHH
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEF-------VPQRTAAYISQHDV-HIGEMTVRETLAFSA 72 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~-------~~~~~~~yv~Q~~~-~~~~lTv~e~l~f~~ 72 (1275)
+++|+||||||||||+++|+|.++|+ +|+|.++|+++... ..++.++|++|++. .+..+||.||+.|+.
T Consensus 35 ~~~iiG~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~ 111 (287)
T PRK13641 35 FVALVGHTGSGKSTLMQHFNALLKPS---SGTITIAGYHITPETGNKNLKKLRKKVSLVFQFPEAQLFENTVLKDVEFGP 111 (287)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhceEEEEeChhhhhccchHHHHHHHHH
Confidence 47999999999999999999999987 99999999887432 12357999999862 333689999998864
Q ss_pred hccCCCCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCc-cccccccCCCccccccccccc
Q 000808 73 RCQGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLE-VCDDTLVGDEMVRGISGGQKK 151 (1275)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~~t~vg~~~~~~LSGGqrq 151 (1275)
...... . ++....++++++.+||. ...+ +.++.|||||||
T Consensus 112 ~~~~~~----------~------------------------~~~~~~~~~~l~~~gL~~~~~~-----~~~~~LSgGq~q 152 (287)
T PRK13641 112 KNFGFS----------E------------------------DEAKEKALKWLKKVGLSEDLIS-----KSPFELSGGQMR 152 (287)
T ss_pred HHcCCC----------H------------------------HHHHHHHHHHHHHcCCChhHhh-----CCcccCCHHHHH
Confidence 321100 0 01112356678889996 3333 445679999999
Q ss_pred hhhHHHHHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChh
Q 000808 152 RVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRE 231 (1275)
Q Consensus 152 RvsiA~al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~ 231 (1275)
||+|||||+.+|++|+|||||+|||+.++..+.+.++++.+ .+++|++++|+.+++.+.||++++|++|++++.|+++
T Consensus 153 rl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~--~g~tvlivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~ 230 (287)
T PRK13641 153 RVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQK--AGHTVILVTHNMDDVAEYADDVLVLEHGKLIKHASPK 230 (287)
T ss_pred HHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHh--CCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 99999999999999999999999999999999999998743 3566677899999999999999999999999999988
Q ss_pred hHH
Q 000808 232 LVL 234 (1275)
Q Consensus 232 ~~~ 234 (1275)
++.
T Consensus 231 ~~~ 233 (287)
T PRK13641 231 EIF 233 (287)
T ss_pred HHh
Confidence 764
No 449
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=5.1e-31 Score=297.57 Aligned_cols=190 Identities=26% Similarity=0.351 Sum_probs=154.0
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCcc---ccceEEEeccccc-cCCCCCHHHHHHHHHhccC
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV---PQRTAAYISQHDV-HIGEMTVRETLAFSARCQG 76 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~~---~~~~~~yv~Q~~~-~~~~lTv~e~l~f~~~~~~ 76 (1275)
+++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++. .++..||.||+.++....+
T Consensus 35 ~~~i~G~nGaGKSTLl~~i~G~~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~~~~~~~tv~enl~~~~~~~~ 111 (279)
T PRK13635 35 WVAIVGHNGSGKSTLAKLLNGLLLPE---AGTITVGGMVLSEETVWDVRRQVGMVFQNPDNQFVGATVQDDVAFGLENIG 111 (279)
T ss_pred EEEEECCCCCcHHHHHHHHhcCCCCC---CcEEEECCEECCcCcHHHHhhheEEEEeCHHHhcccccHHHHHhhhHhhCC
Confidence 47999999999999999999999987 999999999875432 2457999999863 6777899999988643221
Q ss_pred CCCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhhHH
Q 000808 77 VGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTG 156 (1275)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA 156 (1275)
.. . .+....++++++.+||++..++. +..|||||||||+||
T Consensus 112 ~~----------~------------------------~~~~~~~~~~l~~~gL~~~~~~~-----~~~LS~G~~qrv~la 152 (279)
T PRK13635 112 VP----------R------------------------EEMVERVDQALRQVGMEDFLNRE-----PHRLSGGQKQRVAIA 152 (279)
T ss_pred CC----------H------------------------HHHHHHHHHHHHHcCChhhhhCC-----cccCCHHHHHHHHHH
Confidence 00 0 01112356778889997665544 457999999999999
Q ss_pred HHHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhhHH
Q 000808 157 EMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVL 234 (1275)
Q Consensus 157 ~al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~~~ 234 (1275)
|||+.+|++++|||||+|||+.++.++.+.|+++... .+++|++++|+.+++. .+|++++|++|++++.|+.+++.
T Consensus 153 ral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~-~~~tilivsH~~~~~~-~~d~i~~l~~G~i~~~g~~~~~~ 228 (279)
T PRK13635 153 GVLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQ-KGITVLSITHDLDEAA-QADRVIVMNKGEILEEGTPEEIF 228 (279)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHc-CCCEEEEEecCHHHHH-cCCEEEEEECCEEEEECCHHHHh
Confidence 9999999999999999999999999999999987653 3556666788877776 59999999999999999988765
No 450
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=99.97 E-value=2.9e-31 Score=289.38 Aligned_cols=180 Identities=24% Similarity=0.356 Sum_probs=146.6
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCcc------ccceEEEeccccccCCCCCHHHHHHHHHhc
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV------PQRTAAYISQHDVHIGEMTVRETLAFSARC 74 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~~------~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~ 74 (1275)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|++||+.+....
T Consensus 29 ~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~~~~t~~~~l~~~~~~ 105 (214)
T cd03292 29 FVFLVGPSGAGKSTLLKLIYKEELPT---SGTIRVNGQDVSDLRGRAIPYLRRKIGVVFQDFRLLPDRNVYENVAFALEV 105 (214)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcccCCHHHHHHHHHheEEEecCchhccCCcHHHHHHHHHHH
Confidence 47999999999999999999999887 999999998875432 245799999999999999999999986543
Q ss_pred cCCCCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhh
Q 000808 75 QGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVT 154 (1275)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvs 154 (1275)
.+.. . ++....++++++.+||++..++ .+.+||||||||++
T Consensus 106 ~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~-----~~~~LS~G~~qrv~ 146 (214)
T cd03292 106 TGVP----------P------------------------REIRKRVPAALELVGLSHKHRA-----LPAELSGGEQQRVA 146 (214)
T ss_pred cCCC----------H------------------------HHHHHHHHHHHHHcCCHHHhhC-----ChhhcCHHHHHHHH
Confidence 2100 0 0011134567888898765544 34579999999999
Q ss_pred HHHHHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeE
Q 000808 155 TGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQI 224 (1275)
Q Consensus 155 iA~al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i 224 (1275)
|||||+.+|++++|||||+|||+.++..+.+.++++.+ . +.++++++|+.+++.+++|++++|++|++
T Consensus 147 laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~-~-~~tiiivtH~~~~~~~~~d~i~~l~~G~~ 214 (214)
T cd03292 147 IARAIVNSPTILIADEPTGNLDPDTTWEIMNLLKKINK-A-GTTVVVATHAKELVDTTRHRVIALERGKL 214 (214)
T ss_pred HHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHH-c-CCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999999999999998754 3 45666688888889999999999999974
No 451
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=3.8e-31 Score=293.67 Aligned_cols=191 Identities=19% Similarity=0.321 Sum_probs=154.6
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCcc----ccceEEEeccccccCCCCCHHHHHHHHHhccC
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV----PQRTAAYISQHDVHIGEMTVRETLAFSARCQG 76 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~~----~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~ 76 (1275)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+||.||+.+..+...
T Consensus 31 ~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~ 107 (241)
T PRK10895 31 IVGLLGPNGAGKTTTFYMVVGIVPRD---AGNIIIDDEDISLLPLHARARRGIGYLPQEASIFRRLSVYDNLMAVLQIRD 107 (241)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHHHHhCeEEeccCCcccccCcHHHHHhhhhhccc
Confidence 47999999999999999999999887 999999998875432 24579999999988888999999987543210
Q ss_pred CCCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhhHH
Q 000808 77 VGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTG 156 (1275)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA 156 (1275)
. .+ ..+....++++++.+||++..+ +.++.|||||||||+||
T Consensus 108 ~---~~------------------------------~~~~~~~~~~~l~~~~l~~~~~-----~~~~~LS~G~~qrv~la 149 (241)
T PRK10895 108 D---LS------------------------------AEQREDRANELMEEFHIEHLRD-----SMGQSLSGGERRRVEIA 149 (241)
T ss_pred c---cC------------------------------HHHHHHHHHHHHHHcCCHHHhh-----cchhhCCHHHHHHHHHH
Confidence 0 00 0001123466788888875433 44568999999999999
Q ss_pred HHHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhhHH
Q 000808 157 EMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVL 234 (1275)
Q Consensus 157 ~al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~~~ 234 (1275)
||++.+|++++|||||+|||+.++.++.+.++++.. . +.++++++|+.+++.+.+|++++|++|++++.|+++++.
T Consensus 150 ral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-g~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 225 (241)
T PRK10895 150 RALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRD-S-GLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEIL 225 (241)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh-c-CCEEEEEEcCHHHHHHhcCEEEEEeCCeEEeeCCHHHHh
Confidence 999999999999999999999999999999988653 3 455666788888999999999999999999999887753
No 452
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=99.97 E-value=2.6e-31 Score=355.66 Aligned_cols=214 Identities=21% Similarity=0.357 Sum_probs=170.5
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEc-Ccc
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITIS-GYP 755 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~-g~~ 755 (1275)
.++++|++++|+.. .++++|+|+|++|++||++||+||||||||||+++|+|..+ +.+|+|.++ |.+
T Consensus 382 ~I~~~nVsf~Y~~~----------~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~--p~~G~I~i~~g~~ 449 (1466)
T PTZ00265 382 KIQFKNVRFHYDTR----------KDVEIYKDLNFTLTEGKTYAFVGESGCGKSTILKLIERLYD--PTEGDIIINDSHN 449 (1466)
T ss_pred cEEEEEEEEEcCCC----------CCCceeccceEEEcCCCEEEEECCCCCCHHHHHHHHHHhcc--CCCCeEEEeCCcc
Confidence 69999999998521 12469999999999999999999999999999999999866 358999995 566
Q ss_pred CCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHhc-cC--------CCC----------------------------
Q 000808 756 KKQ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWL-RL--------PPE---------------------------- 795 (1275)
Q Consensus 756 ~~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l-~~--------~~~---------------------------- 795 (1275)
+.. ..+++.+|||+|++.+++ .|++||+.++... +. ...
T Consensus 450 i~~~~~~~lr~~Ig~V~Q~~~LF~-~TI~eNI~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (1466)
T PTZ00265 450 LKDINLKWWRSKIGVVSQDPLLFS-NSIKNNIKYSLYSLKDLEALSNYYNEDGNDSQENKNKRNSCRAKCAGDLNDMSNT 528 (1466)
T ss_pred hhhCCHHHHHHhccEecccccchh-ccHHHHHHhcCCCccccchhccccccccccccccccccccccccccchhhhcccc
Confidence 532 345678999999999987 5999999986310 00 000
Q ss_pred -----------CCHHHHHHHHHHHHHHcCCCcc-------ccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCC
Q 000808 796 -----------VDSETQKMFIEEIMELVELNPL-------RQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPT 857 (1275)
Q Consensus 796 -----------~~~~~~~~~~~~~l~~l~l~~~-------~~~~~~~~~~~~lSgGerqrv~ia~~l~~~p~illlDEPt 857 (1275)
......++.+.++++.+++.+. .|+.+|.. ...||||||||++|||||+++|+||+|||||
T Consensus 529 ~~~~~~l~~~~~~~~~~~~~v~~a~~~~~l~~~i~~lp~g~dT~vg~~-g~~LSGGQkQRiaIARAll~~P~ILlLDEpT 607 (1466)
T PTZ00265 529 TDSNELIEMRKNYQTIKDSEVVDVSKKVLIHDFVSALPDKYETLVGSN-ASKLSGGQKQRISIARAIIRNPKILILDEAT 607 (1466)
T ss_pred cchhhhhhcccccccCCHHHHHHHHHHhCcHHHHHhCccccCceeCCC-CCcCCHHHHHHHHHHHHHhcCCCEEEEeCcc
Confidence 0001123457778888877554 35556543 4579999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHhh-CCCEEEEEecCCCHHHHHhhhhhheeecC
Q 000808 858 SGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFESFDELFLMKRG 906 (1275)
Q Consensus 858 sgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~~~~l~~g 906 (1275)
|+||+.++..+++.|+++.+ +|+|+|+++|+++ ..+.+|++++|++|
T Consensus 608 SaLD~~se~~i~~~L~~~~~~~g~TvIiIsHrls--~i~~aD~Iivl~~g 655 (1466)
T PTZ00265 608 SSLDNKSEYLVQKTINNLKGNENRITIIIAHRLS--TIRYANTIFVLSNR 655 (1466)
T ss_pred cccCHHHHHHHHHHHHHHhhcCCCEEEEEeCCHH--HHHhCCEEEEEeCC
Confidence 99999999999999999875 5899999999986 34789999999874
No 453
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=6e-31 Score=290.13 Aligned_cols=191 Identities=21% Similarity=0.340 Sum_probs=155.2
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCcc-ccceEEEeccccccCCCCCHHHHHHHHHhccCCCC
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV-PQRTAAYISQHDVHIGEMTVRETLAFSARCQGVGS 79 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~~-~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~ 79 (1275)
+++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.+|+.||+.+..... .
T Consensus 27 ~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~-~-- 100 (232)
T PRK10771 27 RVAILGPSGAGKSTLLNLIAGFLTPA---SGSLTLNGQDHTTTPPSRRPVSMLFQENNLFSHLTVAQNIGLGLNPG-L-- 100 (232)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCeecCcCChhhccEEEEecccccccCCcHHHHHhcccccc-c--
Confidence 47899999999999999999999887 899999998875432 2357999999998899899999998743210 0
Q ss_pred cchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhhHHHHH
Q 000808 80 RYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEMM 159 (1275)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~al 159 (1275)
... ......++++++.+||++..++. ++.||||||||++||||+
T Consensus 101 ~~~-------------------------------~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~laral 144 (232)
T PRK10771 101 KLN-------------------------------AAQREKLHAIARQMGIEDLLARL-----PGQLSGGQRQRVALARCL 144 (232)
T ss_pred CCC-------------------------------HHHHHHHHHHHHHcCcHHHHhCC-----cccCCHHHHHHHHHHHHH
Confidence 000 00112356678889997655544 457999999999999999
Q ss_pred hcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhhHH
Q 000808 160 VGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVL 234 (1275)
Q Consensus 160 ~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~~~ 234 (1275)
+.+|++++|||||+|||+.++..+.+.|+++.+.. ++++++++|+.+++.+.+|++++|++|++++.|+++++.
T Consensus 145 ~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~-~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~g~~~~~~ 218 (232)
T PRK10771 145 VREQPILLLDEPFSALDPALRQEMLTLVSQVCQER-QLTLLMVSHSLEDAARIAPRSLVVADGRIAWDGPTDELL 218 (232)
T ss_pred hcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 99999999999999999999999999999875533 455666888888999999999999999999999887765
No 454
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=5.7e-31 Score=302.39 Aligned_cols=199 Identities=19% Similarity=0.185 Sum_probs=158.2
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCC-ceeEEEEECCccCCCccc-------cceEEEecccc--ccCCCCCHHHHHHH
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKL-KFSGRVTYNGHGMDEFVP-------QRTAAYISQHD--VHIGEMTVRETLAF 70 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~-~~~G~v~~~g~~~~~~~~-------~~~~~yv~Q~~--~~~~~lTv~e~l~f 70 (1275)
+++|+|+||||||||+++|+|++++.. ..+|+|.++|+++..... ++.++|++|++ .+.+.+||.+++..
T Consensus 35 ~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~ 114 (326)
T PRK11022 35 VVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIME 114 (326)
T ss_pred EEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHHHHHHhCCCEEEEecCchhhcCCcCCHHHHHHH
Confidence 479999999999999999999987421 248999999998754321 13699999987 47888999999877
Q ss_pred HHhccCCCCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCcccccccccc
Q 000808 71 SARCQGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQK 150 (1275)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqr 150 (1275)
....... . ...+....++++++.+||++..+ .-++.+++||||||
T Consensus 115 ~l~~~~~-~--------------------------------~~~~~~~~~~~~L~~~gL~~~~~--~l~~~p~~LSgGq~ 159 (326)
T PRK11022 115 AIKVHQG-G--------------------------------NKKTRRQRAIDLLNQVGIPDPAS--RLDVYPHQLSGGMS 159 (326)
T ss_pred HHHHhcC-C--------------------------------CHHHHHHHHHHHHHHCCCCChHH--HHhCCchhCCHHHH
Confidence 5432110 0 00111224567899999975321 12456788999999
Q ss_pred chhhHHHHHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecCh
Q 000808 151 KRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPR 230 (1275)
Q Consensus 151 qRvsiA~al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~ 230 (1275)
|||+|||||+.+|++|++||||+|||+.++.++++.|+++.+.. +.+++.++|+...+.+++|+|++|++|++++.|++
T Consensus 160 QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~-g~til~iTHdl~~~~~~adri~vm~~G~ive~g~~ 238 (326)
T PRK11022 160 QRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKE-NMALVLITHDLALVAEAAHKIIVMYAGQVVETGKA 238 (326)
T ss_pred HHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCH
Confidence 99999999999999999999999999999999999999986543 55667789999999999999999999999999999
Q ss_pred hhHHH
Q 000808 231 ELVLD 235 (1275)
Q Consensus 231 ~~~~~ 235 (1275)
+++.+
T Consensus 239 ~~~~~ 243 (326)
T PRK11022 239 HDIFR 243 (326)
T ss_pred HHHhh
Confidence 88753
No 455
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=99.97 E-value=4.8e-31 Score=293.17 Aligned_cols=180 Identities=21% Similarity=0.262 Sum_probs=149.0
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCccccceEEEeccccccCCCCCHHHHHHHHHhccCCCCc
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFVPQRTAAYISQHDVHIGEMTVRETLAFSARCQGVGSR 80 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~ 80 (1275)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.. .++.++|++|++.+++.+||+||+.++..
T Consensus 40 ~~~I~G~NGsGKSTLlk~l~Gl~~p~---~G~i~~~g~~~~~--~~~~i~~v~q~~~l~~~~tv~enl~~~~~------- 107 (257)
T PRK11247 40 FVAVVGRSGCGKSTLLRLLAGLETPS---AGELLAGTAPLAE--AREDTRLMFQDARLLPWKKVIDNVGLGLK------- 107 (257)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEHHH--hhCceEEEecCccCCCCCcHHHHHHhccc-------
Confidence 47999999999999999999999887 9999999976532 34579999999888888999999987421
Q ss_pred chhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhhHHHHHh
Q 000808 81 YDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEMMV 160 (1275)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~al~ 160 (1275)
. . ....++++++.+||.+..+ +.+..|||||||||+|||||+
T Consensus 108 -~---~-----------------------------~~~~~~~~l~~~gl~~~~~-----~~~~~LSgGqkqrl~laraL~ 149 (257)
T PRK11247 108 -G---Q-----------------------------WRDAALQALAAVGLADRAN-----EWPAALSGGQKQRVALARALI 149 (257)
T ss_pred -c---h-----------------------------HHHHHHHHHHHcCChhHhc-----CChhhCCHHHHHHHHHHHHHh
Confidence 0 0 0012355788889876544 345679999999999999999
Q ss_pred cCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChh
Q 000808 161 GPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRE 231 (1275)
Q Consensus 161 ~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~ 231 (1275)
.+|++++|||||+|||+.++..+.+.|+++.+.. +.+|++++|+.+++.+.+|++++|++|++++.|+.+
T Consensus 150 ~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~-~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~~~~ 219 (257)
T PRK11247 150 HRPGLLLLDEPLGALDALTRIEMQDLIESLWQQH-GFTVLLVTHDVSEAVAMADRVLLIEEGKIGLDLTVD 219 (257)
T ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecccc
Confidence 9999999999999999999999999999875433 455666888888899999999999999999988653
No 456
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=6.8e-31 Score=292.76 Aligned_cols=186 Identities=25% Similarity=0.352 Sum_probs=151.2
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCccccceEEEeccccccCCCCCHHHHHHHHHhccCCCCc
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFVPQRTAAYISQHDVHIGEMTVRETLAFSARCQGVGSR 80 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~ 80 (1275)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++... ...++|++|++.+++.+||.||+.+.....+..
T Consensus 29 ~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~--~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~~~-- 101 (255)
T PRK11248 29 LLVVLGPSGCGKTTLLNLIAGFVPYQ---HGSITLDGKPVEGP--GAERGVVFQNEGLLPWRNVQDNVAFGLQLAGVE-- 101 (255)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCC--CCcEEEEeCCCccCCCCcHHHHHHhHHHHcCCC--
Confidence 47999999999999999999999887 99999999887532 245899999988888899999998864321100
Q ss_pred chhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhhHHHHHh
Q 000808 81 YDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEMMV 160 (1275)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~al~ 160 (1275)
. .+....++++++.+||++..+ +.+..|||||||||+|||||+
T Consensus 102 --------~------------------------~~~~~~~~~~l~~~gl~~~~~-----~~~~~LSgGq~qrl~laral~ 144 (255)
T PRK11248 102 --------K------------------------MQRLEIAHQMLKKVGLEGAEK-----RYIWQLSGGQRQRVGIARALA 144 (255)
T ss_pred --------H------------------------HHHHHHHHHHHHHcCChhHhh-----CChhhCCHHHHHHHHHHHHHh
Confidence 0 001123566788999976544 345679999999999999999
Q ss_pred cCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEec--CCeEEEecChh
Q 000808 161 GPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLS--DAQIVYQGPRE 231 (1275)
Q Consensus 161 ~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~--~G~i~~~G~~~ 231 (1275)
.+|++++|||||+|||+.++..+.+.|+++.+.. +.+|++++|+.+++..+||++++|+ +|+++..++.+
T Consensus 145 ~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~-g~tviivsH~~~~~~~~~d~i~~l~~~~G~i~~~~~~~ 216 (255)
T PRK11248 145 ANPQLLLLDEPFGALDAFTREQMQTLLLKLWQET-GKQVLLITHDIEEAVFMATELVLLSPGPGRVVERLPLN 216 (255)
T ss_pred cCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEeCCCcEEEEEecCC
Confidence 9999999999999999999999999999875433 4556668888889999999999998 59999888643
No 457
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=99.97 E-value=6.6e-31 Score=285.26 Aligned_cols=199 Identities=23% Similarity=0.301 Sum_probs=164.8
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCC-C-CCceeEEEEECCccCCCccc-------cceEEEeccc--cccCCCCCHHHHHH
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLD-S-KLKFSGRVTYNGHGMDEFVP-------QRTAAYISQH--DVHIGEMTVRETLA 69 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~-~-~~~~~G~v~~~g~~~~~~~~-------~~~~~yv~Q~--~~~~~~lTv~e~l~ 69 (1275)
+++|+|.|||||||+.++|+|+++ | ....+|+|.++|+++-.... .+.++|++|+ ..+-|..||.+.+.
T Consensus 33 ~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~~l~~l~~~~~~~iRG~~I~mIfQ~p~~sLnPv~~Ig~Qi~ 112 (316)
T COG0444 33 ILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGKDLLSLSEKELRKIRGKEIAMIFQDPMTSLNPVMTIGDQIA 112 (316)
T ss_pred EEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCcccccCCHHHHHhhcCceEEEEEcCchhhcCChhhHHHHHH
Confidence 479999999999999999999997 4 33467999999998744321 2579999998 45778899999998
Q ss_pred HHHhccCCCCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccc
Q 000808 70 FSARCQGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQ 149 (1275)
Q Consensus 70 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGq 149 (1275)
-..+.+.... ..++....+.++|+.+||++.+. +.+.++.+|||||
T Consensus 113 E~l~~h~~~~--------------------------------~~~ea~~~a~~~L~~Vgi~~~~~--~~~~YPhelSGGM 158 (316)
T COG0444 113 EVLRLHGKGL--------------------------------SKKEAKERAIELLELVGIPDPER--RLKSYPHELSGGM 158 (316)
T ss_pred HHHHHhhcch--------------------------------hhHHHHHHHHHHHHHcCCCCHHH--HHhhCCcccCCcH
Confidence 7665322100 01123345677899999986542 4467899999999
Q ss_pred cchhhHHHHHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecC
Q 000808 150 KKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGP 229 (1275)
Q Consensus 150 rqRvsiA~al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~ 229 (1275)
||||.||.||+.+|++|+.||||++||..++.+|++.|+++.++ .+++++.++|+..-+.++||||+||..|+|++.|+
T Consensus 159 rQRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~e-~~~aiilITHDl~vva~~aDri~VMYaG~iVE~g~ 237 (316)
T COG0444 159 RQRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQRE-KGTALILITHDLGVVAEIADRVAVMYAGRIVEEGP 237 (316)
T ss_pred HHHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhcceEEEEECcEEEEeCC
Confidence 99999999999999999999999999999999999999998764 57778889999999999999999999999999999
Q ss_pred hhhHH
Q 000808 230 RELVL 234 (1275)
Q Consensus 230 ~~~~~ 234 (1275)
.+++.
T Consensus 238 ~~~i~ 242 (316)
T COG0444 238 VEEIF 242 (316)
T ss_pred HHHHh
Confidence 98875
No 458
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.97 E-value=5.7e-31 Score=283.07 Aligned_cols=166 Identities=44% Similarity=0.732 Sum_probs=139.1
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCc--cccceEEEeccccccCCCCCHHHHHHHHHhccCCC
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEF--VPQRTAAYISQHDVHIGEMTVRETLAFSARCQGVG 78 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~--~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~ 78 (1275)
+++|+||||||||||+++|+|.++|....+|+|.++|.++... ..++.++|++|++.+++.+||+||+.+++...
T Consensus 35 ~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~G~i~i~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~--- 111 (202)
T cd03233 35 MVLVLGRPGSGCSTLLKALANRTEGNVSVEGDIHYNGIPYKEFAEKYPGEIIYVSEEDVHFPTLTVRETLDFALRCK--- 111 (202)
T ss_pred EEEEECCCCCCHHHHHHHhcccCCCCCCcceEEEECCEECccchhhhcceEEEEecccccCCCCcHHHHHhhhhhhc---
Confidence 4799999999999999999999983112399999999887543 23467999999999999999999998743210
Q ss_pred CcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhhHHHH
Q 000808 79 SRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEM 158 (1275)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~a 158 (1275)
.++.+..||||||||++||||
T Consensus 112 -----------------------------------------------------------~~~~~~~LS~Ge~qrl~lara 132 (202)
T cd03233 112 -----------------------------------------------------------GNEFVRGISGGERKRVSIAEA 132 (202)
T ss_pred -----------------------------------------------------------cccchhhCCHHHHHHHHHHHH
Confidence 123445799999999999999
Q ss_pred HhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEec
Q 000808 159 MVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQG 228 (1275)
Q Consensus 159 l~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G 228 (1275)
|+.+|++++|||||+|||+.++..+.+.++++.+..+.++++++||+.+++.+.+|++++|++|++++.|
T Consensus 133 l~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~l~~G~i~~~g 202 (202)
T cd03233 133 LVSRASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLVLYEGRQIYYG 202 (202)
T ss_pred HhhCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEEEECCEEEecC
Confidence 9999999999999999999999999999998765334566776777778999999999999999998765
No 459
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=99.97 E-value=1.4e-30 Score=322.68 Aligned_cols=206 Identities=25% Similarity=0.350 Sum_probs=167.0
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 756 (1275)
-++++|+++++. +++.+|+|+||+|++||+++|+|||||||||||++|+|..++ .+|+|.+++.
T Consensus 6 ~l~i~~l~~~y~------------~~~~il~~vs~~i~~Ge~~~iiG~NGsGKSTLlk~i~G~~~p--~~G~i~~~~~-- 69 (556)
T PRK11819 6 IYTMNRVSKVVP------------PKKQILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKE--FEGEARPAPG-- 69 (556)
T ss_pred EEEEeeEEEEeC------------CCCeeeeCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEecCC--
Confidence 588999998873 124699999999999999999999999999999999998653 4799998752
Q ss_pred CcccccceEEEeccCCCCCCCCCHHHHHHHHHh-cc------------CCCCCC--------------------HHHHHH
Q 000808 757 KQETFTRISGYCEQNDIHSPFVTVYESLLYSAW-LR------------LPPEVD--------------------SETQKM 803 (1275)
Q Consensus 757 ~~~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~-l~------------~~~~~~--------------------~~~~~~ 803 (1275)
..+||++|++.+++.+||.|++.+... .+ ...... ..+.++
T Consensus 70 ------~~i~~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (556)
T PRK11819 70 ------IKVGYLPQEPQLDPEKTVRENVEEGVAEVKAALDRFNEIYAAYAEPDADFDALAAEQGELQEIIDAADAWDLDS 143 (556)
T ss_pred ------CEEEEEecCCCCCCCCcHHHHHHHhhHHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHHHHHHHhcCccchHH
Confidence 358999999999999999999987521 00 000000 001235
Q ss_pred HHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEE
Q 000808 804 FIEEIMELVELNPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVV 883 (1275)
Q Consensus 804 ~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi 883 (1275)
+++++++.+|+.. .+..+ ..|||||||||+||++|+.+|++|||||||+|||+.+...+.+.|+++ +.|||
T Consensus 144 ~~~~~l~~~gl~~-~~~~~-----~~LSgGqkqrv~la~al~~~p~vlLLDEPt~~LD~~~~~~l~~~L~~~---~~tvi 214 (556)
T PRK11819 144 QLEIAMDALRCPP-WDAKV-----TKLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVAWLEQFLHDY---PGTVV 214 (556)
T ss_pred HHHHHHHhCCCCc-ccCch-----hhcCHHHHHHHHHHHHHhCCCCEEEEcCCCCcCChHHHHHHHHHHHhC---CCeEE
Confidence 6788899999953 45554 469999999999999999999999999999999999999999999986 25999
Q ss_pred EEecCCCHHHHHhhhhhheeecCcEEE-EECCC
Q 000808 884 CTIHQPSIDIFESFDELFLMKRGGQEI-YVGPL 915 (1275)
Q Consensus 884 ~~~H~~~~~~~~~~d~~~~l~~gg~~~-~~g~~ 915 (1275)
++||+++ .+...+|++++|++ |+++ |.|+.
T Consensus 215 iisHd~~-~~~~~~d~i~~l~~-g~i~~~~g~~ 245 (556)
T PRK11819 215 AVTHDRY-FLDNVAGWILELDR-GRGIPWEGNY 245 (556)
T ss_pred EEeCCHH-HHHhhcCeEEEEeC-CEEEEecCCH
Confidence 9999986 56678999999996 6765 77875
No 460
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=99.97 E-value=6.1e-31 Score=293.00 Aligned_cols=192 Identities=23% Similarity=0.377 Sum_probs=153.3
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCC--CceeEEEEECCccCCCc-----cccceEEEeccccccCCCCCHHHHHHHHHh
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSK--LKFSGRVTYNGHGMDEF-----VPQRTAAYISQHDVHIGEMTVRETLAFSAR 73 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~--~~~~G~v~~~g~~~~~~-----~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~ 73 (1275)
+++|+||||||||||+++|+|.++|+ ...+|+|.++|+++... ..++.++|++|++.+++ .|++||+.+...
T Consensus 29 ~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~e~l~~~~~ 107 (247)
T TIGR00972 29 VTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVVELRRRVGMVFQKPNPFP-MSIYDNIAYGPR 107 (247)
T ss_pred EEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchHHHHhheEEEecCcccCC-CCHHHHHHhHHH
Confidence 47999999999999999999999763 11279999999887531 12467999999988888 999999998654
Q ss_pred ccCCCCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCc----cccccccCCCccccccccc
Q 000808 74 CQGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLE----VCDDTLVGDEMVRGISGGQ 149 (1275)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~~~t~vg~~~~~~LSGGq 149 (1275)
.++.. . . .+....++.+++.+||. +.. ++.++.|||||
T Consensus 108 ~~~~~---~------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~~~~~LSgG~ 149 (247)
T TIGR00972 108 LHGIK---D------K------------------------KELDEIVEESLKKAALWDEVKDRL-----HDSALGLSGGQ 149 (247)
T ss_pred hcCCC---C------H------------------------HHHHHHHHHHHHHcCCCcchhhHh-----hCCcccCCHHH
Confidence 32100 0 0 00112345678888886 333 34566899999
Q ss_pred cchhhHHHHHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecC
Q 000808 150 KKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGP 229 (1275)
Q Consensus 150 rqRvsiA~al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~ 229 (1275)
||||+|||||+.+|++++|||||+|||+.++..+.+.++++.+ + .+|++++|+.+++.+++|++++|++|++++.|+
T Consensus 150 ~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~ 226 (247)
T TIGR00972 150 QQRLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKK--K-YTIVIVTHNMQQAARISDRTAFFYDGELVEYGP 226 (247)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--c-CeEEEEecCHHHHHHhCCEEEEEECCEEEEeCC
Confidence 9999999999999999999999999999999999999998754 3 456668888889999999999999999999998
Q ss_pred hhhHH
Q 000808 230 RELVL 234 (1275)
Q Consensus 230 ~~~~~ 234 (1275)
++++.
T Consensus 227 ~~~~~ 231 (247)
T TIGR00972 227 TEQIF 231 (247)
T ss_pred HHHHH
Confidence 87764
No 461
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=99.97 E-value=5.7e-31 Score=288.47 Aligned_cols=181 Identities=23% Similarity=0.324 Sum_probs=144.0
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCccc------c-ceEEEeccccccCCCCCHHHHHHHHHh
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFVP------Q-RTAAYISQHDVHIGEMTVRETLAFSAR 73 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~~~------~-~~~~yv~Q~~~~~~~lTv~e~l~f~~~ 73 (1275)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... + +.++|++|++.+++.+||+||+.+...
T Consensus 33 ~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~ 109 (221)
T TIGR02211 33 IVAIVGSSGSGKSTLLHLLGGLDNPT---SGEVLFNGQSLSKLSSNERAKLRNKKLGFIYQFHHLLPDFTALENVAMPLL 109 (221)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEhhhcCHhHHHHHHHhcEEEEecccccCCCCcHHHHHHHHHH
Confidence 47999999999999999999999887 9999999988754321 2 569999999888889999999988643
Q ss_pred ccCCCCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchh
Q 000808 74 CQGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRV 153 (1275)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv 153 (1275)
.... + . .+....++++++.+||++..+ +.++.|||||||||
T Consensus 110 ~~~~----~------~------------------------~~~~~~~~~~l~~~~l~~~~~-----~~~~~LS~G~~qrv 150 (221)
T TIGR02211 110 IGKK----S------V------------------------KEAKERAYEMLEKVGLEHRIN-----HRPSELSGGERQRV 150 (221)
T ss_pred hcCC----C------H------------------------HHHHHHHHHHHHHcCChhhhh-----CChhhCCHHHHHHH
Confidence 2110 0 0 001112456788899975544 34567999999999
Q ss_pred hHHHHHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEE
Q 000808 154 TTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIV 225 (1275)
Q Consensus 154 siA~al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~ 225 (1275)
+|||||+.+|++++|||||+|||+.++..+.+.|+++.+.. +.+|++++|+.+++. .+|++++|++|+++
T Consensus 151 ~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tii~~tH~~~~~~-~~d~v~~l~~G~i~ 220 (221)
T TIGR02211 151 AIARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNREL-NTSFLVVTHDLELAK-KLDRVLEMKDGQLF 220 (221)
T ss_pred HHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHh-hcCEEEEEeCCEec
Confidence 99999999999999999999999999999999999876433 445555777777765 47999999999975
No 462
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=99.97 E-value=8.1e-31 Score=288.98 Aligned_cols=187 Identities=24% Similarity=0.309 Sum_probs=146.7
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCcc------ccceEEEecccc--ccCCCCCHHHHHHHHH
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV------PQRTAAYISQHD--VHIGEMTVRETLAFSA 72 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~~------~~~~~~yv~Q~~--~~~~~lTv~e~l~f~~ 72 (1275)
+++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++|++|++ .+++.+||+||+.+..
T Consensus 33 ~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~tv~~nl~~~~ 109 (228)
T cd03257 33 TLGLVGESGSGKSTLARAILGLLKPT---SGSIIFDGKDLLKLSRRLRKIRRKEIQMVFQDPMSSLNPRMTIGEQIAEPL 109 (228)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEccccchhhHHHhhccEEEEecCchhhcCCcCCHHHHHHHHH
Confidence 47999999999999999999999887 999999998875432 246799999997 4567899999998865
Q ss_pred hccCCCCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCc-cccccccCCCccccccccccc
Q 000808 73 RCQGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLE-VCDDTLVGDEMVRGISGGQKK 151 (1275)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~~t~vg~~~~~~LSGGqrq 151 (1275)
........ . .......+++++.++|. ...+ +.+..|||||||
T Consensus 110 ~~~~~~~~-----~---------------------------~~~~~~~~~~l~~~~l~~~~~~-----~~~~~LS~G~~q 152 (228)
T cd03257 110 RIHGKLSK-----K---------------------------EARKEAVLLLLVGVGLPEEVLN-----RYPHELSGGQRQ 152 (228)
T ss_pred HhccCCcH-----H---------------------------HHHHHHHHHHHHHCCCChhHhh-----CCchhcCHHHHH
Confidence 42210000 0 00001123567788884 2333 445679999999
Q ss_pred hhhHHHHHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEec
Q 000808 152 RVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQG 228 (1275)
Q Consensus 152 RvsiA~al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G 228 (1275)
||+|||||+.+|++++|||||+|||+.++..+.+.+++.++.. +.+|++++|+.+++...+|++++|++|+++..|
T Consensus 153 rv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g 228 (228)
T cd03257 153 RVAIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEEL-GLTLLFITHDLGVVAKIADRVAVMYAGKIVEEG 228 (228)
T ss_pred HHHHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHhcCeEEEEeCCEEEecC
Confidence 9999999999999999999999999999999999999876532 455666788888899999999999999998765
No 463
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=9.3e-31 Score=300.39 Aligned_cols=193 Identities=18% Similarity=0.196 Sum_probs=158.4
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCcc------ccceEEEecccc--ccCCCCCHHHHHHHHH
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV------PQRTAAYISQHD--VHIGEMTVRETLAFSA 72 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~~------~~~~~~yv~Q~~--~~~~~lTv~e~l~f~~ 72 (1275)
+++|+|+||||||||+++|+|.++|+ +|+|.++|+++.... .++.++||+|++ .+.+.+||.+++.+..
T Consensus 43 ~~~IvG~sGsGKSTLl~~l~gl~~p~---~G~i~~~g~~l~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~ 119 (327)
T PRK11308 43 TLAVVGESGCGKSTLARLLTMIETPT---GGELYYQGQDLLKADPEAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPL 119 (327)
T ss_pred EEEEECCCCCcHHHHHHHHHcCCCCC---CcEEEECCEEcCcCCHHHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHH
Confidence 47999999999999999999999886 899999999875432 245799999987 5788899999998755
Q ss_pred hccCCCCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCcc-ccccccCCCccccccccccc
Q 000808 73 RCQGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEV-CDDTLVGDEMVRGISGGQKK 151 (1275)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~-~~~t~vg~~~~~~LSGGqrq 151 (1275)
..... .. ..+....+.++++.+||.. .. ++.++.|||||||
T Consensus 120 ~~~~~---------~~------------------------~~~~~~~~~~~l~~~gL~~~~~-----~~~p~~LSgGq~Q 161 (327)
T PRK11308 120 LINTS---------LS------------------------AAERREKALAMMAKVGLRPEHY-----DRYPHMFSGGQRQ 161 (327)
T ss_pred HHccC---------CC------------------------HHHHHHHHHHHHHHCCCChHHh-----cCCCccCCHHHHH
Confidence 43210 00 0011224567899999953 33 4566789999999
Q ss_pred hhhHHHHHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChh
Q 000808 152 RVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRE 231 (1275)
Q Consensus 152 RvsiA~al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~ 231 (1275)
||+|||||+.+|++|++||||+|||..++.++++.|+++.+. .++++++++|+...+.+++|+|++|++|++++.|+.+
T Consensus 162 Rv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~-~g~til~iTHdl~~~~~~adrv~vm~~G~ive~g~~~ 240 (327)
T PRK11308 162 RIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQE-LGLSYVFISHDLSVVEHIADEVMVMYLGRCVEKGTKE 240 (327)
T ss_pred HHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHH
Confidence 999999999999999999999999999999999999987654 3566777899999999999999999999999999998
Q ss_pred hHHH
Q 000808 232 LVLD 235 (1275)
Q Consensus 232 ~~~~ 235 (1275)
++.+
T Consensus 241 ~~~~ 244 (327)
T PRK11308 241 QIFN 244 (327)
T ss_pred HHhc
Confidence 8753
No 464
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=99.97 E-value=7.3e-31 Score=289.37 Aligned_cols=187 Identities=24% Similarity=0.305 Sum_probs=150.3
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCcc----ccceEEEeccccccCCCCCHHHHHHHHHhccC
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV----PQRTAAYISQHDVHIGEMTVRETLAFSARCQG 76 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~~----~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~ 76 (1275)
+++|+||||||||||+++|+|.++|. +|+|.++|.++.... .++.++|++|++.+++.+|++||+.++....+
T Consensus 28 ~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~ 104 (230)
T TIGR03410 28 VTCVLGRNGVGKTTLLKTLMGLLPVK---SGSIRLDGEDITKLPPHERARAGIAYVPQGREIFPRLTVEENLLTGLAALP 104 (230)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEECCCCCHHHHHHhCeEEeccCCcccCCCcHHHHHHHHHHhcC
Confidence 47999999999999999999999987 999999998875432 13569999999999999999999988653211
Q ss_pred CCCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhC-CccccccccCCCccccccccccchhhH
Q 000808 77 VGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLG-LEVCDDTLVGDEMVRGISGGQKKRVTT 155 (1275)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lg-L~~~~~t~vg~~~~~~LSGGqrqRvsi 155 (1275)
.. . ....+++++.++ +++.. ++.++.||||||||++|
T Consensus 105 ~~----------~---------------------------~~~~~~~l~~~~~l~~~~-----~~~~~~LS~G~~qrv~l 142 (230)
T TIGR03410 105 RR----------S---------------------------RKIPDEIYELFPVLKEML-----GRRGGDLSGGQQQQLAI 142 (230)
T ss_pred cc----------h---------------------------HHHHHHHHHHHHhHHHHh-----hCChhhCCHHHHHHHHH
Confidence 00 0 001233455554 33323 34566899999999999
Q ss_pred HHHHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhhH
Q 000808 156 GEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELV 233 (1275)
Q Consensus 156 A~al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~~ 233 (1275)
||||+.+|++++|||||+|||+.++.++.+.|++..+. ++.+++.++|+.+++..++|++++|++|++++.|+.+++
T Consensus 143 a~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tii~~sH~~~~~~~~~d~v~~l~~g~i~~~~~~~~~ 219 (230)
T TIGR03410 143 ARALVTRPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAE-GGMAILLVEQYLDFARELADRYYVMERGRVVASGAGDEL 219 (230)
T ss_pred HHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHc-CCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHc
Confidence 99999999999999999999999999999999987543 245666688888899999999999999999999988765
No 465
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=7.7e-31 Score=300.97 Aligned_cols=196 Identities=20% Similarity=0.273 Sum_probs=154.5
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCC--CceeEEEEECCccCCCc-----cccceEEEeccccccCCCCCHHHHHHHHHh
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSK--LKFSGRVTYNGHGMDEF-----VPQRTAAYISQHDVHIGEMTVRETLAFSAR 73 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~--~~~~G~v~~~g~~~~~~-----~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~ 73 (1275)
+++|+||||||||||+++|+|+.++. ...+|+|.++|.++... ..++.++||+|+++++ +.|++||+.|+..
T Consensus 110 ~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~~~~~~~lr~~i~~v~q~~~~~-~~ti~eNi~~~~~ 188 (329)
T PRK14257 110 VTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSKKISSLELRTRIGMVFQKPTPF-EMSIFDNVAYGPR 188 (329)
T ss_pred EEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHhhhccEEEEecCCccC-CCcHHHHHHhHHH
Confidence 47999999999999999999998631 12389999999988531 2356799999998877 5799999998643
Q ss_pred ccCCCCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchh
Q 000808 74 CQGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRV 153 (1275)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv 153 (1275)
..+... . +..+..++..++..+|.+..++.++ +.+.+|||||||||
T Consensus 189 ~~~~~~----------~-----------------------~~~~~~~~~~l~~~~L~~~l~~~~~-~~~~~LSgGqkqRl 234 (329)
T PRK14257 189 NNGIND----------R-----------------------KILEKIVEKSLKSAALWDEVKDDLD-KAGNALSGGQQQRL 234 (329)
T ss_pred hcCCCh----------H-----------------------HHHHHHHHHHHHHcCCcchhhhhhh-CCcccCCHHHHHHH
Confidence 221000 0 0001123455667777554445554 46778999999999
Q ss_pred hHHHHHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhhH
Q 000808 154 TTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELV 233 (1275)
Q Consensus 154 siA~al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~~ 233 (1275)
+||||++.+|+|++|||||+|||+.+...+.+.+++..+ +.++++++|..+.+.+.+|||++|++|++++.|+++++
T Consensus 235 ~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~---~~Tii~iTH~l~~i~~~~Driivl~~G~i~e~g~~~~l 311 (329)
T PRK14257 235 CIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKK---KYSIIIVTHSMAQAQRISDETVFFYQGWIEEAGETKTI 311 (329)
T ss_pred HHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc---CCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999999999999999999988643 35666788989899999999999999999999999987
Q ss_pred H
Q 000808 234 L 234 (1275)
Q Consensus 234 ~ 234 (1275)
.
T Consensus 312 ~ 312 (329)
T PRK14257 312 F 312 (329)
T ss_pred h
Confidence 5
No 466
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=99.97 E-value=4.2e-31 Score=329.82 Aligned_cols=193 Identities=24% Similarity=0.371 Sum_probs=154.1
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCcc---ccceEEEeccccccCCCCCHHHHHHHHHhccCC
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV---PQRTAAYISQHDVHIGEMTVRETLAFSARCQGV 77 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~~---~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~ 77 (1275)
.+||+||||||||||++.|+|.++|+ +|+|.+||.++++.. .++.++||+|++.+|. .||+|||.++.+-
T Consensus 357 ~vaiVG~sGsGKSTl~~LL~r~~~~~---~G~I~idg~dI~~i~~~~lr~~I~~V~Qd~~LF~-~TI~~NI~~g~~~--- 429 (567)
T COG1132 357 KVAIVGPSGSGKSTLIKLLLRLYDPT---SGEILIDGIDIRDISLDSLRKRIGIVSQDPLLFS-GTIRENIALGRPD--- 429 (567)
T ss_pred EEEEECCCCCCHHHHHHHHhccCCCC---CCeEEECCEehhhcCHHHHHHhccEEcccceeec-ccHHHHHhcCCCC---
Confidence 37999999999999999999999987 999999999987654 4688999999988886 7999999995321
Q ss_pred CCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhhHHH
Q 000808 78 GSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGE 157 (1275)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~ 157 (1275)
...++..+++... ...+.++ .++++.||.||+ ++.+||||||||++|||
T Consensus 430 ----------------------at~eei~~a~k~a------~~~d~I~--~lp~g~dt~vge-~G~~LSgGQrQrlaiAR 478 (567)
T COG1132 430 ----------------------ATDEEIEEALKLA------NAHEFIA--NLPDGYDTIVGE-RGVNLSGGQRQRLAIAR 478 (567)
T ss_pred ----------------------CCHHHHHHHHHHh------ChHHHHH--hCcccccceecC-CCccCCHHHHHHHHHHH
Confidence 0011111111110 1122233 368899999994 55689999999999999
Q ss_pred HHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhhHHH
Q 000808 158 MMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVLD 235 (1275)
Q Consensus 158 al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~~~~ 235 (1275)
|++.+|+||+||||||+||+.+...+.+.+++.. .++|+++ +.|..+.+.+ +|+|++|++|++++.|+++++..
T Consensus 479 all~~~~ILILDEaTSalD~~tE~~I~~~l~~l~--~~rT~ii-IaHRlsti~~-aD~IiVl~~G~i~e~G~h~eLl~ 552 (567)
T COG1132 479 ALLRNPPILILDEATSALDTETEALIQDALKKLL--KGRTTLI-IAHRLSTIKN-ADRIIVLDNGRIVERGTHEELLA 552 (567)
T ss_pred HHhcCCCEEEEeccccccCHHhHHHHHHHHHHHh--cCCEEEE-EeccHhHHHh-CCEEEEEECCEEEEecCHHHHHH
Confidence 9999999999999999999999999999998654 2346666 6666655555 99999999999999999999875
No 467
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=6.9e-31 Score=290.83 Aligned_cols=188 Identities=24% Similarity=0.373 Sum_probs=149.9
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCcc----ccceEEEeccccccCCCCCHHHHHHHHHhccC
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV----PQRTAAYISQHDVHIGEMTVRETLAFSARCQG 76 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~~----~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~ 76 (1275)
+++|+||||||||||+++|+|..+|+ +|+|.++|.++.... .++.++|++|++.+++.+||.||+.++.....
T Consensus 33 ~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~ 109 (237)
T PRK11614 33 IVTLIGANGAGKTTLLGTLCGDPRAT---SGRIVFDGKDITDWQTAKIMREAVAIVPEGRRVFSRMTVEENLAMGGFFAE 109 (237)
T ss_pred EEEEECCCCCCHHHHHHHHcCCCCCC---CceEEECCEecCCCCHHHHHHhCEEEeccCcccCCCCcHHHHHHHhhhccC
Confidence 47999999999999999999999887 999999998875432 23579999999888998999999988532110
Q ss_pred CCCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHh-CCccccccccCCCccccccccccchhhH
Q 000808 77 VGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVL-GLEVCDDTLVGDEMVRGISGGQKKRVTT 155 (1275)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-gL~~~~~t~vg~~~~~~LSGGqrqRvsi 155 (1275)
. .+. ...++.+++.+ ++.+..+ +.++.||||||||++|
T Consensus 110 ---~----~~~-----------------------------~~~~~~~l~~~~~l~~~~~-----~~~~~LS~G~~qrl~l 148 (237)
T PRK11614 110 ---R----DQF-----------------------------QERIKWVYELFPRLHERRI-----QRAGTMSGGEQQMLAI 148 (237)
T ss_pred ---h----hHH-----------------------------HHHHHHHHHHHHHHHHHHh-----CchhhCCHHHHHHHHH
Confidence 0 000 00123344555 3543333 3456799999999999
Q ss_pred HHHHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhhHH
Q 000808 156 GEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVL 234 (1275)
Q Consensus 156 A~al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~~~ 234 (1275)
|||++.+|++++|||||+|||+.++..+.+.++++.+ . +.+|+.++|+.+++.+.+|++++|++|++++.|+++++.
T Consensus 149 a~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 225 (237)
T PRK11614 149 GRALMSQPRLLLLDEPSLGLAPIIIQQIFDTIEQLRE-Q-GMTIFLVEQNANQALKLADRGYVLENGHVVLEDTGDALL 225 (237)
T ss_pred HHHHHhCCCEEEEcCccccCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCcHHHHHhhCCEEEEEeCCEEEeeCCHHHHh
Confidence 9999999999999999999999999999999998754 3 455666788888999999999999999999999988764
No 468
>PRK10908 cell division protein FtsE; Provisional
Probab=99.97 E-value=7.6e-31 Score=287.43 Aligned_cols=181 Identities=22% Similarity=0.285 Sum_probs=147.2
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCcc------ccceEEEeccccccCCCCCHHHHHHHHHhc
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV------PQRTAAYISQHDVHIGEMTVRETLAFSARC 74 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~~------~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~ 74 (1275)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++..|++||+.+....
T Consensus 30 ~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~ 106 (222)
T PRK10908 30 MAFLTGHSGAGKSTLLKLICGIERPS---AGKIWFSGHDITRLKNREVPFLRRQIGMIFQDHHLLMDRTVYDNVAIPLII 106 (222)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccCChhHHHHHHhheEEEecCccccccccHHHHHHhHHHh
Confidence 47999999999999999999999887 999999998775421 245799999998888899999999886532
Q ss_pred cCCCCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhh
Q 000808 75 QGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVT 154 (1275)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvs 154 (1275)
.+.. . ++....++..++.+||.+..+ +.+..||||||||++
T Consensus 107 ~~~~-------~---------------------------~~~~~~~~~~l~~~~l~~~~~-----~~~~~LS~G~~qrv~ 147 (222)
T PRK10908 107 AGAS-------G---------------------------DDIRRRVSAALDKVGLLDKAK-----NFPIQLSGGEQQRVG 147 (222)
T ss_pred cCCC-------H---------------------------HHHHHHHHHHHHHcCChhhhh-----CCchhCCHHHHHHHH
Confidence 2100 0 001112456788888876444 345679999999999
Q ss_pred HHHHHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEE
Q 000808 155 TGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIV 225 (1275)
Q Consensus 155 iA~al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~ 225 (1275)
||||++.+|++++|||||+|||+.++..+.+.+++..+ . +.++++++|+.+++...+|++++|++|+++
T Consensus 148 laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tiii~sH~~~~~~~~~d~i~~l~~G~i~ 216 (222)
T PRK10908 148 IARAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNR-V-GVTVLMATHDIGLISRRSYRMLTLSDGHLH 216 (222)
T ss_pred HHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEEECCEEc
Confidence 99999999999999999999999999999999998754 2 456666888888999999999999999975
No 469
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=99.97 E-value=1.2e-30 Score=283.89 Aligned_cols=186 Identities=20% Similarity=0.297 Sum_probs=151.0
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCc-cccceEEEeccccccCCCCCHHHHHHHHHhccCCCC
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEF-VPQRTAAYISQHDVHIGEMTVRETLAFSARCQGVGS 79 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~-~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~ 79 (1275)
+++|+||||||||||+++|+|.++|+ +|+|.++|+++... ..++.++|++|++.+++.+|+.||+.+...... ..
T Consensus 26 ~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~t~~en~~~~~~~~~-~~ 101 (213)
T TIGR01277 26 IVAIMGPSGAGKSTLLNLIAGFIEPA---SGSIKVNDQSHTGLAPYQRPVSMLFQENNLFAHLTVRQNIGLGLHPGL-KL 101 (213)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEEcccCChhccceEEEeccCccCCCCcHHHHHHhHhhccC-Cc
Confidence 47999999999999999999999987 99999999887532 234679999999999988999999987532100 00
Q ss_pred cchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhhHHHHH
Q 000808 80 RYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEMM 159 (1275)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~al 159 (1275)
+ .+.+..++++++.+||++..++ .++.||||||||++||||+
T Consensus 102 --~-------------------------------~~~~~~~~~~l~~~~l~~~~~~-----~~~~LS~G~~qrl~laral 143 (213)
T TIGR01277 102 --N-------------------------------AEQQEKVVDAAQQVGIADYLDR-----LPEQLSGGQRQRVALARCL 143 (213)
T ss_pred --c-------------------------------HHHHHHHHHHHHHcCcHHHhhC-----CcccCCHHHHHHHHHHHHH
Confidence 0 0011224567888999765443 4567999999999999999
Q ss_pred hcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecC
Q 000808 160 VGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGP 229 (1275)
Q Consensus 160 ~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~ 229 (1275)
+.+|++++|||||+|||+.++..+.+.+++..+. .+++|++++|+.+++.+.+|++++|++|++++.|.
T Consensus 144 ~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~-~~~tii~vsh~~~~~~~~~d~v~~l~~g~i~~~~~ 212 (213)
T TIGR01277 144 VRPNPILLLDEPFSALDPLLREEMLALVKQLCSE-RQRTLLMVTHHLSDARAIASQIAVVSQGKIKVVSD 212 (213)
T ss_pred hcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHhhcCeEEEEECCeEEEecC
Confidence 9999999999999999999999999999987543 24566668888888899999999999999998874
No 470
>COG4136 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=99.97 E-value=8.1e-31 Score=247.29 Aligned_cols=180 Identities=26% Similarity=0.329 Sum_probs=155.1
Q ss_pred ccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCc-eEEEEEEEcCccCCc-ccccceEEEeccCCCCCCCCC
Q 000808 702 KLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YITGNITISGYPKKQ-ETFTRISGYCEQNDIHSPFVT 779 (1275)
Q Consensus 702 ~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~-~~~G~i~~~g~~~~~-~~~~~~~~~v~q~~~~~~~lt 779 (1275)
+..+|-|+|++|.+||++.||||||||||||+..+.|...+. ..+|++++|++.++. ..-+|++|..+||+.+||.++
T Consensus 14 g~cLLa~~n~Tia~GeivtlMGPSGcGKSTLls~~~G~La~~F~~~G~~~l~~~~l~~lPa~qRq~GiLFQD~lLFphls 93 (213)
T COG4136 14 GSCLLANVNFTIAKGEIVTLMGPSGCGKSTLLSWMIGALAGQFSCTGELWLNEQRLDMLPAAQRQIGILFQDALLFPHLS 93 (213)
T ss_pred CceEEEeeeEEecCCcEEEEECCCCccHHHHHHHHHhhcccCcceeeEEEECCeeccccchhhhheeeeecccccccccc
Confidence 356999999999999999999999999999999999965433 478999999988654 234688999999999999999
Q ss_pred HHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCC
Q 000808 780 VYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 859 (1275)
Q Consensus 780 v~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsg 859 (1275)
|.+|+.|+. |.+...+.+++.++..+++.||....+... ..||||||-||++-|+|+..|+.++||||+|.
T Consensus 94 Vg~Nl~fAl----p~~~KG~aRr~~a~aAL~~~gL~g~f~~dP-----~tlSGGQrARvaL~R~Lla~Pk~lLLDEPFS~ 164 (213)
T COG4136 94 VGQNLLFAL----PATLKGNARRNAANAALERSGLDGAFHQDP-----ATLSGGQRARVALLRALLAQPKALLLDEPFSR 164 (213)
T ss_pred cccceEEec----CcccccHHHHhhHHHHHHHhccchhhhcCh-----hhcCcchHHHHHHHHHHHhCcceeeeCCchhH
Confidence 999998863 455555677778899999999998877653 47999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHh-hCCCEEEEEecCCC
Q 000808 860 LDARAAAIVMRTVRNTV-DTGRTVVCTIHQPS 890 (1275)
Q Consensus 860 LD~~~~~~i~~~l~~~~-~~g~tvi~~~H~~~ 890 (1275)
||..-+.+..+.+-... ..|..+|.+|||..
T Consensus 165 LD~ALR~qfR~wVFs~~r~agiPtv~VTHD~~ 196 (213)
T COG4136 165 LDVALRDQFRQWVFSEVRAAGIPTVQVTHDLQ 196 (213)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCeEEEecccc
Confidence 99999999888876544 45899999999854
No 471
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=6.7e-31 Score=297.53 Aligned_cols=192 Identities=24% Similarity=0.324 Sum_probs=154.8
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCC--c---cccceEEEeccccc-cCCCCCHHHHHHHHHhc
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDE--F---VPQRTAAYISQHDV-HIGEMTVRETLAFSARC 74 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~--~---~~~~~~~yv~Q~~~-~~~~lTv~e~l~f~~~~ 74 (1275)
+++|+||||||||||+++|+|.++|+ +|+|.++|+++.. . ..++.++|++|++. .+...||+||+.++...
T Consensus 34 ~~~i~G~nGaGKSTLl~~i~Gl~~p~---~G~i~i~g~~~~~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~ 110 (283)
T PRK13636 34 VTAILGGNGAGKSTLFQNLNGILKPS---SGRILFDGKPIDYSRKGLMKLRESVGMVFQDPDNQLFSASVYQDVSFGAVN 110 (283)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---ccEEEECCEECCCCcchHHHHHhhEEEEecCcchhhccccHHHHHHhHHHH
Confidence 47999999999999999999999987 9999999988742 1 22467999999863 34467999999886432
Q ss_pred cCCCCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhh
Q 000808 75 QGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVT 154 (1275)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvs 154 (1275)
.+.. . .+....++.+++.+||.+..+ +.++.||||||||++
T Consensus 111 ~~~~----------~------------------------~~~~~~~~~~l~~~gL~~~~~-----~~~~~LS~G~~qrl~ 151 (283)
T PRK13636 111 LKLP----------E------------------------DEVRKRVDNALKRTGIEHLKD-----KPTHCLSFGQKKRVA 151 (283)
T ss_pred cCCC----------H------------------------HHHHHHHHHHHHHCCChhhhh-----CCcccCCHHHHHHHH
Confidence 1100 0 001123566788999976554 456689999999999
Q ss_pred HHHHHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhhHH
Q 000808 155 TGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVL 234 (1275)
Q Consensus 155 iA~al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~~~ 234 (1275)
|||||+.+|++|+|||||+|||+.++..+.+.++++++. .+++|+.++|+.+++...|||+++|++|++++.|+++++.
T Consensus 152 laraL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~-~g~tillvsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~ 230 (283)
T PRK13636 152 IAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKE-LGLTIIIATHDIDIVPLYCDNVFVMKEGRVILQGNPKEVF 230 (283)
T ss_pred HHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHh-CCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999999987653 2456666889998999999999999999999999988765
Q ss_pred H
Q 000808 235 D 235 (1275)
Q Consensus 235 ~ 235 (1275)
.
T Consensus 231 ~ 231 (283)
T PRK13636 231 A 231 (283)
T ss_pred c
Confidence 3
No 472
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=1.1e-30 Score=291.59 Aligned_cols=198 Identities=22% Similarity=0.254 Sum_probs=154.4
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCC--CceeEEEEECCccCCCc---cccceEEEeccccccCCCCCHHHHHHHHHhcc
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSK--LKFSGRVTYNGHGMDEF---VPQRTAAYISQHDVHIGEMTVRETLAFSARCQ 75 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~--~~~~G~v~~~g~~~~~~---~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~ 75 (1275)
+++|+||||||||||+++|+|.++|. ...+|+|.++|.++... ..++.++|++|++.+++.+||.||+.++....
T Consensus 31 ~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~ 110 (250)
T PRK14247 31 ITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIELRRRVQMVFQIPNPIPNLSIFENVALGLKLN 110 (250)
T ss_pred EEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHHHhccEEEEeccCccCCCCcHHHHHHHHHHhc
Confidence 47999999999999999999998741 12489999999887532 23467999999988888999999999865322
Q ss_pred CCCCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhhH
Q 000808 76 GVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTT 155 (1275)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsi 155 (1275)
..... ..+....+++.++.+||.+..... -++.+.+|||||||||+|
T Consensus 111 ~~~~~--------------------------------~~~~~~~~~~~l~~~~l~~~~~~~-~~~~~~~LSgG~~qrv~l 157 (250)
T PRK14247 111 RLVKS--------------------------------KKELQERVRWALEKAQLWDEVKDR-LDAPAGKLSGGQQQRLCI 157 (250)
T ss_pred cccCC--------------------------------HHHHHHHHHHHHHHcCCCcchhhh-hcCCcccCCHHHHHHHHH
Confidence 10000 000112345678888885421111 134567899999999999
Q ss_pred HHHHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhhHH
Q 000808 156 GEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVL 234 (1275)
Q Consensus 156 A~al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~~~ 234 (1275)
||||+.+|++++|||||+|||+.++.++.+.+++..+ +.++++++|+.+++.+.+|++++|++|++++.|+++++.
T Consensus 158 aral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~---~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 233 (250)
T PRK14247 158 ARALAFQPEVLLADEPTANLDPENTAKIESLFLELKK---DMTIVLVTHFPQQAARISDYVAFLYKGQIVEWGPTREVF 233 (250)
T ss_pred HHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc---CCEEEEEeCCHHHHHHhcCEEEEEECCeEEEECCHHHHH
Confidence 9999999999999999999999999999999998742 355666888888899999999999999999999987764
No 473
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=99.97 E-value=1e-30 Score=292.83 Aligned_cols=191 Identities=21% Similarity=0.283 Sum_probs=154.2
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCc----------------cccceEEEeccccccCCCCCH
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEF----------------VPQRTAAYISQHDVHIGEMTV 64 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~----------------~~~~~~~yv~Q~~~~~~~lTv 64 (1275)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++|++|++.+++.+||
T Consensus 33 ~~~l~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~sv 109 (257)
T PRK10619 33 VISIIGSSGSGKSTFLRCINFLEKPS---EGSIVVNGQTINLVRDKDGQLKVADKNQLRLLRTRLTMVFQHFNLWSHMTV 109 (257)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CeEEEECCEEcccccccccccccccchHHHHHhhceEEEecCcccCCCCcH
Confidence 47999999999999999999999887 89999999876420 124579999999999999999
Q ss_pred HHHHHHHHh-ccCCCCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccc
Q 000808 65 RETLAFSAR-CQGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVR 143 (1275)
Q Consensus 65 ~e~l~f~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~ 143 (1275)
+||+.++.. ..... ..+.+..+.++++.+||.+.. .++.+.
T Consensus 110 ~enl~~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~gl~~~~----~~~~~~ 151 (257)
T PRK10619 110 LENVMEAPIQVLGLS----------------------------------KQEARERAVKYLAKVGIDERA----QGKYPV 151 (257)
T ss_pred HHHHHHHHHHhCCCC----------------------------------HHHHHHHHHHHHHHcCCChhh----hhCCcc
Confidence 999987532 11000 001112345678889997542 124456
Q ss_pred cccccccchhhHHHHHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCe
Q 000808 144 GISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQ 223 (1275)
Q Consensus 144 ~LSGGqrqRvsiA~al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~ 223 (1275)
.||||||||++|||||+.+|++++|||||+|||+.++..+.+.|+++.+ . +.+|++++|+.+++..+||++++|++|+
T Consensus 152 ~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~-~-g~tiiivsH~~~~~~~~~d~i~~l~~G~ 229 (257)
T PRK10619 152 HLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAE-E-GKTMVVVTHEMGFARHVSSHVIFLHQGK 229 (257)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-c-CCEEEEEeCCHHHHHHhcCEEEEEECCE
Confidence 8999999999999999999999999999999999999999999998754 2 5566668888888999999999999999
Q ss_pred EEEecChhhHH
Q 000808 224 IVYQGPRELVL 234 (1275)
Q Consensus 224 i~~~G~~~~~~ 234 (1275)
+++.|+++++.
T Consensus 230 i~~~~~~~~~~ 240 (257)
T PRK10619 230 IEEEGAPEQLF 240 (257)
T ss_pred EEEeCCHHHhh
Confidence 99999887754
No 474
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=99.97 E-value=1.1e-30 Score=290.37 Aligned_cols=197 Identities=19% Similarity=0.283 Sum_probs=155.1
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCcc----ccceEEEeccccccCCCCCHHHHHHHHHhccC
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV----PQRTAAYISQHDVHIGEMTVRETLAFSARCQG 76 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~~----~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~ 76 (1275)
+++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+||+||+.++.....
T Consensus 30 ~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~ 106 (242)
T TIGR03411 30 LRVIIGPNGAGKTTMMDVITGKTRPD---EGSVLFGGTDLTGLPEHQIARAGIGRKFQKPTVFENLTVFENLELALPRDK 106 (242)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CCeEEECCeecCCCCHHHHHhcCeeEeccccccCCCCCHHHHHHHhhhccc
Confidence 47999999999999999999999887 999999998775432 13469999999999999999999998543110
Q ss_pred CCCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhhHH
Q 000808 77 VGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTG 156 (1275)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA 156 (1275)
..+....... ..+....+++.++.+|+++..++ .++.|||||||||+||
T Consensus 107 --~~~~~~~~~~------------------------~~~~~~~~~~~l~~~~l~~~~~~-----~~~~LS~Ge~qrv~la 155 (242)
T TIGR03411 107 --SVFASLFFRL------------------------SAEEKDRIEEVLETIGLADEADR-----LAGLLSHGQKQWLEIG 155 (242)
T ss_pred --cccccccccc------------------------HHHHHHHHHHHHHHcCCchhhcC-----ChhhCCHHHHHHHHHH
Confidence 0000000000 00112235678888999765544 4557999999999999
Q ss_pred HHHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhhHH
Q 000808 157 EMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVL 234 (1275)
Q Consensus 157 ~al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~~~ 234 (1275)
||++.+|++++|||||+|||+.++..+.+.++++.+ + .+|++++|+.+++.++||++++|++|++++.|+++++.
T Consensus 156 ral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~~sH~~~~~~~~~d~i~~l~~g~~~~~~~~~~~~ 230 (242)
T TIGR03411 156 MLLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAG--K-HSVVVVEHDMEFVRSIADKVTVLHQGSVLAEGSLDQVQ 230 (242)
T ss_pred HHHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhc--C-CEEEEEECCHHHHHHhCCEEEEEECCeEEeeCCHHHHh
Confidence 999999999999999999999999999999998753 3 45666888888999999999999999999999877653
No 475
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=8.9e-31 Score=295.80 Aligned_cols=191 Identities=25% Similarity=0.331 Sum_probs=154.5
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCcc---ccceEEEeccccc-cCCCCCHHHHHHHHHhccC
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV---PQRTAAYISQHDV-HIGEMTVRETLAFSARCQG 76 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~~---~~~~~~yv~Q~~~-~~~~lTv~e~l~f~~~~~~ 76 (1275)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++. .+...||.||+.+.....+
T Consensus 32 ~~~i~G~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~~ 108 (277)
T PRK13652 32 RIAVIGPNGAGKSTLFRHFNGILKPT---SGSVLIRGEPITKENIREVRKFVGLVFQNPDDQIFSPTVEQDIAFGPINLG 108 (277)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHhheEEEecCcccccccccHHHHHHhHHHHcC
Confidence 47999999999999999999999987 999999998875422 2357899999863 3446799999987543211
Q ss_pred CCCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhhHH
Q 000808 77 VGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTG 156 (1275)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA 156 (1275)
.. ..+....++..++.+||.+..++. ++.||||||||++||
T Consensus 109 ~~----------------------------------~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~Gq~qrl~la 149 (277)
T PRK13652 109 LD----------------------------------EETVAHRVSSALHMLGLEELRDRV-----PHHLSGGEKKRVAIA 149 (277)
T ss_pred CC----------------------------------HHHHHHHHHHHHHHCCChhHhcCC-----cccCCHHHHHHHHHH
Confidence 00 000112356678889997655544 457999999999999
Q ss_pred HHHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhhHH
Q 000808 157 EMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVL 234 (1275)
Q Consensus 157 ~al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~~~ 234 (1275)
|||+.+|++++|||||+|||+.++..+.+.++++.+. .+++|+.++|+.+++.+.||++++|++|++++.|+++++.
T Consensus 150 raL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~-~g~tvli~tH~~~~~~~~~drv~~l~~G~i~~~g~~~~~~ 226 (277)
T PRK13652 150 GVIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPET-YGMTVIFSTHQLDLVPEMADYIYVMDKGRIVAYGTVEEIF 226 (277)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEecCHHHHHHhCCEEEEEECCeEEEECCHHHHh
Confidence 9999999999999999999999999999999987653 2456666888888999999999999999999999988874
No 476
>COG4608 AppF ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism]
Probab=99.97 E-value=1.4e-30 Score=276.99 Aligned_cols=189 Identities=26% Similarity=0.351 Sum_probs=157.7
Q ss_pred EEEEEeEEEEEeccchhhhcccccc-ccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCcc
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILED-KLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 755 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~ 755 (1275)
-++.+|++..+..... .... ...+++||||+|++||.+||+|.||||||||-++|.|..+ +.+|+|.++|.+
T Consensus 4 ll~v~~l~k~f~~~~~-----~~~~~~v~avd~Vsf~i~~ge~~glVGESG~GKSTlgr~i~~L~~--pt~G~i~f~g~~ 76 (268)
T COG4608 4 LLEVKNLKKYFPVGKG-----FGKKRYVKAVDGVSFSIKEGETLGLVGESGCGKSTLGRLILGLEE--PTSGEILFEGKD 76 (268)
T ss_pred eEEEeccEEEEecccc-----cCcccceEEecceeEEEcCCCEEEEEecCCCCHHHHHHHHHcCcC--CCCceEEEcCcc
Confidence 4778888877754321 0111 2479999999999999999999999999999999999876 458999999987
Q ss_pred CCcccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCc-cccccccCCCCCCCCHHH
Q 000808 756 KKQETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNP-LRQSLVGLPGESGLSTEQ 834 (1275)
Q Consensus 756 ~~~~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~-~~~~~~~~~~~~~lSgGe 834 (1275)
+.... .+++.+++.++++.+|+.. ..++. +.++||||
T Consensus 77 i~~~~-------------------------------------~~~~~~~v~elL~~Vgl~~~~~~ry-----PhelSGGQ 114 (268)
T COG4608 77 ITKLS-------------------------------------KEERRERVLELLEKVGLPEEFLYRY-----PHELSGGQ 114 (268)
T ss_pred hhhcc-------------------------------------hhHHHHHHHHHHHHhCCCHHHhhcC-----CcccCchh
Confidence 54211 3455677899999999865 33333 35799999
Q ss_pred HHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhhhhheeecCcEEEEEC
Q 000808 835 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVG 913 (1275)
Q Consensus 835 rqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g 913 (1275)
|||+.|||||+.+|+++++|||||.||...+.++.++|+++.++ |.|.++++||.+ .+...+|++.+|.. |+++..|
T Consensus 115 rQRi~IARALal~P~liV~DEpvSaLDvSiqaqIlnLL~dlq~~~~lt~lFIsHDL~-vv~~isdri~VMy~-G~iVE~g 192 (268)
T COG4608 115 RQRIGIARALALNPKLIVADEPVSALDVSVQAQILNLLKDLQEELGLTYLFISHDLS-VVRYISDRIAVMYL-GKIVEIG 192 (268)
T ss_pred hhhHHHHHHHhhCCcEEEecCchhhcchhHHHHHHHHHHHHHHHhCCeEEEEEEEHH-hhhhhcccEEEEec-CceeEec
Confidence 99999999999999999999999999999999999999999765 999999999986 46778999999996 7999999
Q ss_pred CCC
Q 000808 914 PLG 916 (1275)
Q Consensus 914 ~~~ 916 (1275)
+.+
T Consensus 193 ~~~ 195 (268)
T COG4608 193 PTE 195 (268)
T ss_pred CHH
Confidence 873
No 477
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=8.1e-31 Score=295.38 Aligned_cols=189 Identities=26% Similarity=0.355 Sum_probs=152.3
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCcc----ccceEEEeccccc-cCCCCCHHHHHHHHHhcc
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV----PQRTAAYISQHDV-HIGEMTVRETLAFSARCQ 75 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~~----~~~~~~yv~Q~~~-~~~~lTv~e~l~f~~~~~ 75 (1275)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++. .+...|+.||+.+.....
T Consensus 30 ~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~ 106 (274)
T PRK13644 30 YIGIIGKNGSGKSTLALHLNGLLRPQ---KGKVLVSGIDTGDFSKLQGIRKLVGIVFQNPETQFVGRTVEEDLAFGPENL 106 (274)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEECCccccHHHHHhheEEEEEChhhhcccchHHHHHHhhHHHc
Confidence 47999999999999999999999887 999999998875422 2457999999865 366789999998864321
Q ss_pred CCCCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhhH
Q 000808 76 GVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTT 155 (1275)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsi 155 (1275)
+.. . .+....++++++.+||++..++. ++.||||||||++|
T Consensus 107 ~~~----------~------------------------~~~~~~~~~~l~~~gl~~~~~~~-----~~~LS~G~~qrv~l 147 (274)
T PRK13644 107 CLP----------P------------------------IEIRKRVDRALAEIGLEKYRHRS-----PKTLSGGQGQCVAL 147 (274)
T ss_pred CCC----------H------------------------HHHHHHHHHHHHHCCCHHHhcCC-----cccCCHHHHHHHHH
Confidence 100 0 00112346678889997665544 45799999999999
Q ss_pred HHHHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhhHH
Q 000808 156 GEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVL 234 (1275)
Q Consensus 156 A~al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~~~ 234 (1275)
||||+.+|++++|||||+|||+.++..+.+.++++.+ .+++|++++|+.+++ ..+|++++|++|++++.|+++++.
T Consensus 148 aral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~--~g~til~~tH~~~~~-~~~d~v~~l~~G~i~~~g~~~~~~ 223 (274)
T PRK13644 148 AGILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHE--KGKTIVYITHNLEEL-HDADRIIVMDRGKIVLEGEPENVL 223 (274)
T ss_pred HHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--CCCEEEEEecCHHHH-hhCCEEEEEECCEEEEECCHHHHh
Confidence 9999999999999999999999999999999998754 355666678888887 569999999999999999988764
No 478
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=1.2e-30 Score=292.56 Aligned_cols=206 Identities=21% Similarity=0.280 Sum_probs=156.2
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCcc----ccceEEEeccccccCCCCCHHHHHHHHHhccC
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV----PQRTAAYISQHDVHIGEMTVRETLAFSARCQG 76 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~~----~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~ 76 (1275)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .+..++|++|++.+++.+||+||+.++.....
T Consensus 33 ~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~ 109 (255)
T PRK11300 33 IVSLIGPNGAGKTTVFNCLTGFYKPT---GGTILLRGQHIEGLPGHQIARMGVVRTFQHVRLFREMTVIENLLVAQHQQL 109 (255)
T ss_pred EEEEECCCCCCHHHHHHHHhCCcCCC---cceEEECCEECCCCCHHHHHhcCeEEeccCcccCCCCcHHHHHHHhhhccc
Confidence 47999999999999999999999987 999999998875432 12358999999999999999999998643110
Q ss_pred CCCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhhHH
Q 000808 77 VGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTG 156 (1275)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA 156 (1275)
. .+....... . .... ....+....++++++.+||++..+ +.++.||||||||++||
T Consensus 110 ~---~~~~~~~~~--------~-~~~~-------~~~~~~~~~~~~~l~~~gl~~~~~-----~~~~~LS~G~~qrv~la 165 (255)
T PRK11300 110 K---TGLFSGLLK--------T-PAFR-------RAESEALDRAATWLERVGLLEHAN-----RQAGNLAYGQQRRLEIA 165 (255)
T ss_pred c---chhhhhhcc--------c-cccc-------cchhHHHHHHHHHHHhCChhhhhh-----CChhhCCHHHHHHHHHH
Confidence 0 000000000 0 0000 000011223566788899875444 44567999999999999
Q ss_pred HHHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhhHH
Q 000808 157 EMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVL 234 (1275)
Q Consensus 157 ~al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~~~ 234 (1275)
+|++.+|++++|||||+|||+.++..+.+.|+++.+. .+++|+.++|+.+++.+.||++++|++|++++.|+++++.
T Consensus 166 ~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~-~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~ 242 (255)
T PRK11300 166 RCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNE-HNVTVLLIEHDMKLVMGISDRIYVVNQGTPLANGTPEEIR 242 (255)
T ss_pred HHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhh-cCCEEEEEeCCHHHHHHhCCEEEEEECCeEEecCCHHHHh
Confidence 9999999999999999999999999999999987543 2456666888888999999999999999999999887653
No 479
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=1.7e-30 Score=292.72 Aligned_cols=190 Identities=21% Similarity=0.290 Sum_probs=152.1
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCcc---ccceEEEeccccc-cCCCCCHHHHHHHHHhccC
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV---PQRTAAYISQHDV-HIGEMTVRETLAFSARCQG 76 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~~---~~~~~~yv~Q~~~-~~~~lTv~e~l~f~~~~~~ 76 (1275)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++. +++..|+++|+.+.....+
T Consensus 37 ~~~I~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~v~~~~~~~~~~~~ 113 (269)
T PRK13648 37 WTSIVGHNGSGKSTIAKLMIGIEKVK---SGEIFYNNQAITDDNFEKLRKHIGIVFQNPDNQFVGSIVKYDVAFGLENHA 113 (269)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHhheeEEEeChHHhcccccHHHHHHhhHHhcC
Confidence 47999999999999999999999887 999999998875422 2457999999874 6778899999988643211
Q ss_pred CCCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhhHH
Q 000808 77 VGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTG 156 (1275)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA 156 (1275)
.. . .+....++.+++.+|+.+..++ .++.||||||||++||
T Consensus 114 ~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~-----~~~~LS~G~~qrl~la 154 (269)
T PRK13648 114 VP----------Y------------------------DEMHRRVSEALKQVDMLERADY-----EPNALSGGQKQRVAIA 154 (269)
T ss_pred CC----------H------------------------HHHHHHHHHHHHHcCCchhhhC-----CcccCCHHHHHHHHHH
Confidence 00 0 0011234567888898765543 4567999999999999
Q ss_pred HHHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhhHH
Q 000808 157 EMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVL 234 (1275)
Q Consensus 157 ~al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~~~ 234 (1275)
||++.+|++++|||||+|||+.++..+.+.++++.+. ++++|++++|+.+++.. +|++++|++|++++.|+++++.
T Consensus 155 ral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~-~~~tiiivtH~~~~~~~-~d~i~~l~~G~i~~~g~~~~~~ 230 (269)
T PRK13648 155 GVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSE-HNITIISITHDLSEAME-ADHVIVMNKGTVYKEGTPTEIF 230 (269)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEecCchHHhc-CCEEEEEECCEEEEecCHHHHh
Confidence 9999999999999999999999999999999987543 24555567777777765 9999999999999999988764
No 480
>COG5265 ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
Probab=99.97 E-value=1.9e-31 Score=292.60 Aligned_cols=216 Identities=26% Similarity=0.407 Sum_probs=175.0
Q ss_pred CCCcEEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEc
Q 000808 673 FEPHSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITIS 752 (1275)
Q Consensus 673 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~ 752 (1275)
..+..+.|+++++.++ +++++|+++||++++|+++|++||||+||||++++|....+ ..+|.|.+|
T Consensus 258 ~~~g~v~F~~V~F~y~------------~~r~iL~~isf~i~~g~tvAiVg~SG~gKsTI~rllfRFyD--~~sG~I~id 323 (497)
T COG5265 258 VRLGAVAFINVSFAYD------------PRRPILNGISFTIPLGKTVAIVGESGAGKSTILRLLFRFYD--VNSGSITID 323 (497)
T ss_pred cccceEEEEEEEeecc------------ccchhhcCccccccCccEEEEEeCCCCcHHHHHHHHHHHhC--CcCceEEEc
Confidence 3456799999999986 34679999999999999999999999999999999998766 358999999
Q ss_pred CccCCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHH-----HHHHHHcCCCccccccccC
Q 000808 753 GYPKKQ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFI-----EEIMELVELNPLRQSLVGL 824 (1275)
Q Consensus 753 g~~~~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~-----~~~l~~l~l~~~~~~~~~~ 824 (1275)
|+++.. ...++-+|.||||..++. -|...|+.|+. .+.+.++..... ...++ .+.+-.++.||.
T Consensus 324 ~qdir~vtq~slR~aIg~VPQDtvLFN-Dti~yni~ygr-----~~at~eev~aaa~~aqi~~fi~--~lP~gy~t~Vge 395 (497)
T COG5265 324 GQDIRDVTQQSLRRAIGIVPQDTVLFN-DTIAYNIKYGR-----PDATAEEVGAAAEAAQIHDFIQ--SLPEGYDTGVGE 395 (497)
T ss_pred chhHHHhHHHHHHHHhCcCcccceehh-hhHHHHHhccC-----ccccHHHHHHHHHHhhhhHHHH--hCchhhhcccch
Confidence 998653 457788999999998875 48888887753 233333332211 11222 233445677775
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheee
Q 000808 825 PGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMK 904 (1275)
Q Consensus 825 ~~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~ 904 (1275)
.+. .|||||||||+|||+++.+|+||++||+||+||..+.+.|+..|++.+ .|+|.+++.|+++ ..-.+|.|++|+
T Consensus 396 rgl-klSggekqrvaiar~ilk~p~il~~deatsaldt~te~~iq~~l~~~~-~~rttlviahrls--ti~~adeiivl~ 471 (497)
T COG5265 396 RGL-KLSGGEKQRVAIARTILKNPPILILDEATSALDTHTEQAIQAALREVS-AGRTTLVIAHRLS--TIIDADEIIVLD 471 (497)
T ss_pred hee-eccCchHHHHHHHHHHhcCCCEEEEehhhhHhhhhHHHHHHHHHHHHh-CCCeEEEEeehhh--hccCCceEEEee
Confidence 433 499999999999999999999999999999999999999999999986 5899999999987 345689999999
Q ss_pred cCcEEEEECCC
Q 000808 905 RGGQEIYVGPL 915 (1275)
Q Consensus 905 ~gg~~~~~g~~ 915 (1275)
+ |+++.-|.-
T Consensus 472 ~-g~i~erg~h 481 (497)
T COG5265 472 N-GRIVERGTH 481 (497)
T ss_pred C-CEEEecCcH
Confidence 6 799999975
No 481
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=1.2e-30 Score=294.34 Aligned_cols=190 Identities=28% Similarity=0.371 Sum_probs=152.0
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCc-----cccceEEEecccccc-CCCCCHHHHHHHHHhc
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEF-----VPQRTAAYISQHDVH-IGEMTVRETLAFSARC 74 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~-----~~~~~~~yv~Q~~~~-~~~lTv~e~l~f~~~~ 74 (1275)
+++|+||||||||||+++|+|.++|+ +|+|.++|+++... ..++.++|++|++.. +...|+.||+.+....
T Consensus 29 ~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~l~~~~~~ 105 (271)
T PRK13638 29 VTGLVGANGCGKSTLFMNLSGLLRPQ---KGAVLWQGKPLDYSKRGLLALRQQVATVFQDPEQQIFYTDIDSDIAFSLRN 105 (271)
T ss_pred EEEEECCCCCCHHHHHHHHcCCCCCC---ccEEEECCEEcccccCCHHHHHhheEEEeeChhhccccccHHHHHHHHHHH
Confidence 47999999999999999999999987 99999999887421 123579999998652 4456899999886432
Q ss_pred cCCCCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhh
Q 000808 75 QGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVT 154 (1275)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvs 154 (1275)
.+.. . .+....++.+++.+||.+..++ .+..||||||||++
T Consensus 106 ~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~-----~~~~LSgG~~qrl~ 146 (271)
T PRK13638 106 LGVP----------E------------------------AEITRRVDEALTLVDAQHFRHQ-----PIQCLSHGQKKRVA 146 (271)
T ss_pred cCCC----------H------------------------HHHHHHHHHHHHHcCCHhHhcC-----CchhCCHHHHHHHH
Confidence 2100 0 0011124567888888765544 45579999999999
Q ss_pred HHHHHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhhHH
Q 000808 155 TGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVL 234 (1275)
Q Consensus 155 iA~al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~~~ 234 (1275)
|||||+.+|++++|||||+|||+.++..+.+.|+++.. . +.+|++++|+.+++.+++|++++|++|++++.|+++++.
T Consensus 147 laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~-g~tii~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 224 (271)
T PRK13638 147 IAGALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVA-Q-GNHVIISSHDIDLIYEISDAVYVLRQGQILTHGAPGEVF 224 (271)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 99999999999999999999999999999999998754 3 455666889888999999999999999999999987764
No 482
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=1.5e-30 Score=295.17 Aligned_cols=190 Identities=21% Similarity=0.303 Sum_probs=150.9
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCc-------cccceEEEeccccc-cCCCCCHHHHHHHHH
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEF-------VPQRTAAYISQHDV-HIGEMTVRETLAFSA 72 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~-------~~~~~~~yv~Q~~~-~~~~lTv~e~l~f~~ 72 (1275)
+++|+||||||||||+++|+|.++|+ +|+|.++|+++... ..++.++|++|++. .+...||+||+.+..
T Consensus 35 ~~~l~G~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~tv~e~l~~~~ 111 (280)
T PRK13649 35 YTAFIGHTGSGKSTIMQLLNGLHVPT---QGSVRVDDTLITSTSKNKDIKQIRKKVGLVFQFPESQLFEETVLKDVAFGP 111 (280)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccCHHHHHhheEEEeeChhhhhccccHHHHHHHHH
Confidence 47999999999999999999999887 99999999887532 12457999999862 233479999998864
Q ss_pred hccCCCCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCcc-ccccccCCCccccccccccc
Q 000808 73 RCQGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEV-CDDTLVGDEMVRGISGGQKK 151 (1275)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~-~~~t~vg~~~~~~LSGGqrq 151 (1275)
...+.. . ++....++.+++.+||.. ..+ +.++.|||||||
T Consensus 112 ~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~-----~~~~~LSgG~~q 152 (280)
T PRK13649 112 QNFGVS----------Q------------------------EEAEALAREKLALVGISESLFE-----KNPFELSGGQMR 152 (280)
T ss_pred HHcCCC----------H------------------------HHHHHHHHHHHHHcCCChhhhh-----CCcccCCHHHHH
Confidence 321100 0 001123456788888863 233 445679999999
Q ss_pred hhhHHHHHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChh
Q 000808 152 RVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRE 231 (1275)
Q Consensus 152 RvsiA~al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~ 231 (1275)
|++|||||+.+|++++|||||+|||+.++..+.+.|+++.+ . +.+|++++|+.+++.+++|++++|++|++++.|+++
T Consensus 153 rv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 230 (280)
T PRK13649 153 RVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQ-S-GMTIVLVTHLMDDVANYADFVYVLEKGKLVLSGKPK 230 (280)
T ss_pred HHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-C-CCEEEEEeccHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 99999999999999999999999999999999999998754 3 456666788888899999999999999999999988
Q ss_pred hHH
Q 000808 232 LVL 234 (1275)
Q Consensus 232 ~~~ 234 (1275)
++.
T Consensus 231 ~~~ 233 (280)
T PRK13649 231 DIF 233 (280)
T ss_pred HHh
Confidence 764
No 483
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=99.97 E-value=1.4e-30 Score=291.23 Aligned_cols=191 Identities=30% Similarity=0.425 Sum_probs=153.7
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCcc---ccceEEEeccccccCCCCCHHHHHHHHHhccCC
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV---PQRTAAYISQHDVHIGEMTVRETLAFSARCQGV 77 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~~---~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~ 77 (1275)
+++|+||||||||||+++|+|..+|+ +|+|.++|.++.... .++.++|++|++.+++.+||+||+.++......
T Consensus 30 ~~~i~G~nGsGKSTLl~~i~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~ 106 (258)
T PRK13548 30 VVAILGPNGAGKSTLLRALSGELSPD---SGEVRLNGRPLADWSPAELARRRAVLPQHSSLSFPFTVEEVVAMGRAPHGL 106 (258)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEEcccCCHHHhhhheEEEccCCcCCCCCCHHHHHHhhhcccCC
Confidence 47999999999999999999999887 999999998764322 235699999998887889999999885421100
Q ss_pred CCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhhHHH
Q 000808 78 GSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGE 157 (1275)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~ 157 (1275)
.. ++....++++++.+||++..++. +..|||||||||+|||
T Consensus 107 --~~--------------------------------~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSgGe~qrv~la~ 147 (258)
T PRK13548 107 --SR--------------------------------AEDDALVAAALAQVDLAHLAGRD-----YPQLSGGEQQRVQLAR 147 (258)
T ss_pred --Cc--------------------------------HHHHHHHHHHHHHcCCHhHhcCC-----cccCCHHHHHHHHHHH
Confidence 00 00111245678888997655544 4579999999999999
Q ss_pred HHh------cCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChh
Q 000808 158 MMV------GPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRE 231 (1275)
Q Consensus 158 al~------~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~ 231 (1275)
||+ .+|++++|||||+|||+.++..+.+.++++.+.. +.+|++++|+.+++..++|++++|++|++++.|+++
T Consensus 148 al~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~ 226 (258)
T PRK13548 148 VLAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHER-GLAVIVVLHDLNLAARYADRIVLLHQGRLVADGTPA 226 (258)
T ss_pred HHhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEECCHHHHHHhcCEEEEEECCEEEeeCCHH
Confidence 999 5999999999999999999999999999876333 455666888888999999999999999999999887
Q ss_pred hHH
Q 000808 232 LVL 234 (1275)
Q Consensus 232 ~~~ 234 (1275)
++.
T Consensus 227 ~~~ 229 (258)
T PRK13548 227 EVL 229 (258)
T ss_pred HHh
Confidence 654
No 484
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=1.1e-30 Score=294.43 Aligned_cols=190 Identities=24% Similarity=0.326 Sum_probs=151.9
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCc---cccceEEEeccccc-cCCCCCHHHHHHHHHhccC
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEF---VPQRTAAYISQHDV-HIGEMTVRETLAFSARCQG 76 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~---~~~~~~~yv~Q~~~-~~~~lTv~e~l~f~~~~~~ 76 (1275)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++|++|++. .++.+||+||+.++.....
T Consensus 37 ~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~ 113 (271)
T PRK13632 37 YVAILGHNGSGKSTISKILTGLLKPQ---SGEIKIDGITISKENLKEIRKKIGIIFQNPDNQFIGATVEDDIAFGLENKK 113 (271)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEecCcCCHHHHhcceEEEEeCHHHhcCcccHHHHHHhHHHHcC
Confidence 47999999999999999999999987 99999999987542 23467999999863 5778899999988643211
Q ss_pred CCCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhhHH
Q 000808 77 VGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTG 156 (1275)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA 156 (1275)
. + .++....++++++.+||.+..++. ++.||||||||++||
T Consensus 114 ~----~------------------------------~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrl~la 154 (271)
T PRK13632 114 V----P------------------------------PKKMKDIIDDLAKKVGMEDYLDKE-----PQNLSGGQKQRVAIA 154 (271)
T ss_pred C----C------------------------------HHHHHHHHHHHHHHcCCHHHhhCC-----cccCCHHHHHHHHHH
Confidence 0 0 000112356678889997655544 457999999999999
Q ss_pred HHHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhhHH
Q 000808 157 EMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVL 234 (1275)
Q Consensus 157 ~al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~~~ 234 (1275)
|||+.+|++++|||||+|||+.++..+.+.++++.+. ++++|++++|+.+++. .+|++++|++|++++.|+.+++.
T Consensus 155 ral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~-~~~tiii~sH~~~~~~-~~d~v~~l~~G~i~~~g~~~~~~ 230 (271)
T PRK13632 155 SVLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKT-RKKTLISITHDMDEAI-LADKVIVFSEGKLIAQGKPKEIL 230 (271)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCcEEEEEEechhHHh-hCCEEEEEECCEEEEecCHHHHh
Confidence 9999999999999999999999999999999987643 3355555677777774 79999999999999999887754
No 485
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=99.97 E-value=1.6e-30 Score=285.12 Aligned_cols=182 Identities=25% Similarity=0.328 Sum_probs=150.8
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCccccceEEEeccccccCCCCCHHHHHHHHHhccCCCCc
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFVPQRTAAYISQHDVHIGEMTVRETLAFSARCQGVGSR 80 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~ 80 (1275)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .+.++|++|++.+++.+|++||+.+.....+.
T Consensus 28 ~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~~~~~~~~~-~~~~~~~~q~~~~~~~~t~~~~~~~~~~~~~~--- 100 (223)
T TIGR03740 28 VYGLLGPNGAGKSTLLKMITGILRPT---SGEIIFDGHPWTRKD-LHKIGSLIESPPLYENLTARENLKVHTTLLGL--- 100 (223)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEeccccc-cccEEEEcCCCCccccCCHHHHHHHHHHHcCC---
Confidence 47999999999999999999999887 999999998765322 35799999998888889999999875432110
Q ss_pred chhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhhHHHHHh
Q 000808 81 YDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEMMV 160 (1275)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~al~ 160 (1275)
....++.+++.+||.+..+. .+..||||||||++||||++
T Consensus 101 -----------------------------------~~~~~~~~l~~~~l~~~~~~-----~~~~LS~G~~~rv~laral~ 140 (223)
T TIGR03740 101 -----------------------------------PDSRIDEVLNIVDLTNTGKK-----KAKQFSLGMKQRLGIAIALL 140 (223)
T ss_pred -----------------------------------CHHHHHHHHHHcCCcHHHhh-----hHhhCCHHHHHHHHHHHHHh
Confidence 00123456788888765443 45679999999999999999
Q ss_pred cCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChh
Q 000808 161 GPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRE 231 (1275)
Q Consensus 161 ~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~ 231 (1275)
.+|++++|||||+|||+.++..+.+.|++..+ . +.+|+.++|+.+++.+.+|++++|++|++++.|++.
T Consensus 141 ~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~-~-~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~ 209 (223)
T TIGR03740 141 NHPKLLILDEPTNGLDPIGIQELRELIRSFPE-Q-GITVILSSHILSEVQQLADHIGIISEGVLGYQGKIN 209 (223)
T ss_pred cCCCEEEECCCccCCCHHHHHHHHHHHHHHHH-C-CCEEEEEcCCHHHHHHhcCEEEEEeCCEEEEecChh
Confidence 99999999999999999999999999998753 3 455666788888899999999999999999999764
No 486
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.97 E-value=1.2e-30 Score=252.03 Aligned_cols=181 Identities=25% Similarity=0.330 Sum_probs=151.8
Q ss_pred EEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCccc-------cceEEEeccccccCCCCCHHHHHHHHHhc
Q 000808 2 TLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFVP-------QRTAAYISQHDVHIGEMTVRETLAFSARC 74 (1275)
Q Consensus 2 ~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~~~-------~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~ 74 (1275)
++|+|||||||||||-+|+|+-.|+ +|+|.+.|+++..... .+.+|+|+|.-.++|++|..||+...+.+
T Consensus 39 vaiVG~SGSGKSTLl~vlAGLd~~s---sGeV~l~G~~L~~ldEd~rA~~R~~~vGfVFQSF~Lip~ltAlENV~lPleL 115 (228)
T COG4181 39 VAIVGPSGSGKSTLLAVLAGLDDPS---SGEVRLLGQPLHKLDEDARAALRARHVGFVFQSFHLIPNLTALENVALPLEL 115 (228)
T ss_pred EEEEcCCCCcHHhHHHHHhcCCCCC---CceEEEcCcchhhcCHHHHHHhhccceeEEEEeeeccccchhhhhccchhhh
Confidence 6899999999999999999999987 9999999998865431 36899999999999999999999998877
Q ss_pred cCCCCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhh
Q 000808 75 QGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVT 154 (1275)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvs 154 (1275)
++-+.+ +......+.|+.+||.+-.+ .++++|||||+|||+
T Consensus 116 ~ge~~~----------------------------------~~~~~A~~lL~~vGLg~Rl~-----HyP~qLSGGEQQRVA 156 (228)
T COG4181 116 RGESSA----------------------------------DSRAGAKALLEAVGLGKRLT-----HYPAQLSGGEQQRVA 156 (228)
T ss_pred cCCccc----------------------------------cHHHHHHHHHHHhCcccccc-----cCccccCchHHHHHH
Confidence 652111 01123456789999986543 356789999999999
Q ss_pred HHHHHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEE
Q 000808 155 TGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVY 226 (1275)
Q Consensus 155 iA~al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~ 226 (1275)
||||+...|+|||-||||-+||..+..+|.+.+-.+.+. .+++.+.++|+. .....|||.+-|.+|+++.
T Consensus 157 iARAfa~~P~vLfADEPTGNLD~~Tg~~iaDLlF~lnre-~G~TlVlVTHD~-~LA~Rc~R~~r~~~G~l~~ 226 (228)
T COG4181 157 LARAFAGRPDVLFADEPTGNLDRATGDKIADLLFALNRE-RGTTLVLVTHDP-QLAARCDRQLRLRSGRLVE 226 (228)
T ss_pred HHHHhcCCCCEEeccCCCCCcchhHHHHHHHHHHHHhhh-cCceEEEEeCCH-HHHHhhhheeeeecceecc
Confidence 999999999999999999999999999999999888765 466666677765 5677899999999999874
No 487
>cd03236 ABC_RNaseL_inhibitor_domain1 The ATPase domain 1 of RNase L inhibitor. The ABC ATPase, RNase L inhibitor (RLI), is a key enzyme in ribosomal biogenesis, formation of translation preinitiation complexes, and assembly of HIV capsids. RLI s are not transport proteins and thus cluster with a group of soluble proteins that lack the transmembrane components commonly found in other members of the family. Structurally, RLIs have an N-terminal Fe-S domain and two nucleotide binding domains which are arranged to form two composite active sites in their interface cleft. RLI is one of the most conserved enzymes between archaea and eukaryotes with a sequence identity more than 48%. The high degree of evolutionary conservation suggests that RLI performs a central role in archaeal and eukaryotic physiology.
Probab=99.97 E-value=9.8e-31 Score=289.74 Aligned_cols=191 Identities=21% Similarity=0.246 Sum_probs=154.6
Q ss_pred ceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEE-----------EcCccCCcc--c-c--cceEEE
Q 000808 704 MLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIT-----------ISGYPKKQE--T-F--TRISGY 767 (1275)
Q Consensus 704 ~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~-----------~~g~~~~~~--~-~--~~~~~~ 767 (1275)
.+|+|+| .+++||+++|+|||||||||||++|+|..++ .+|+|. ++|.+.... . . ...++|
T Consensus 15 ~~l~~i~-~i~~Ge~~~IvG~nGsGKSTLlk~l~Gl~~p--~~G~I~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~ 91 (255)
T cd03236 15 FKLHRLP-VPREGQVLGLVGPNGIGKSTALKILAGKLKP--NLGKFDDPPDWDEILDEFRGSELQNYFTKLLEGDVKVIV 91 (255)
T ss_pred hhhhcCC-CCCCCCEEEEECCCCCCHHHHHHHHhCCcCC--CCceEeeccccchhhhhccCchhhhhhHHhhhcccceee
Confidence 5999999 5999999999999999999999999998763 478885 777765321 1 1 123689
Q ss_pred eccCCCCCCCCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhC
Q 000808 768 CEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKRLTIAVELVAN 847 (1275)
Q Consensus 768 v~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~~l~~~ 847 (1275)
++|+...++. ++.+++.+.. + ....++.+.++++.+|+.+..+..+ ..||||||||++||++|+.+
T Consensus 92 ~~~~~~~~~~-~~~~~i~~~l--~------~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~qrv~laral~~~ 157 (255)
T cd03236 92 KPQYVDLIPK-AVKGKVGELL--K------KKDERGKLDELVDQLELRHVLDRNI-----DQLSGGELQRVAIAAALARD 157 (255)
T ss_pred ecchhccCch-HHHHHHHHHh--c------hhHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHHHHHHHHHHHHhC
Confidence 9998777774 7888876532 1 1223456789999999987766654 46999999999999999999
Q ss_pred CcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhhhhheeecCcEEEEECC
Q 000808 848 PSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVGP 914 (1275)
Q Consensus 848 p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~ 914 (1275)
|++++|||||+|||+.+...+.+.|+++.++|+|||+++|+++ .+...+|++++|. |++.++|-
T Consensus 158 p~illlDEPts~LD~~~~~~l~~~l~~l~~~~~tIIiiSHd~~-~~~~~ad~i~~l~--~~~~~~~~ 221 (255)
T cd03236 158 ADFYFFDEPSSYLDIKQRLNAARLIRELAEDDNYVLVVEHDLA-VLDYLSDYIHCLY--GEPGAYGV 221 (255)
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCEEEEEC--CCCCccee
Confidence 9999999999999999999999999998877899999999975 4566899999996 34665553
No 488
>COG4161 ArtP ABC-type arginine transport system, ATPase component [Amino acid transport and metabolism]
Probab=99.97 E-value=1.1e-30 Score=249.08 Aligned_cols=188 Identities=25% Similarity=0.319 Sum_probs=152.7
Q ss_pred EEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCc---------cccceEEEeccccccCCCCCHHHHHHHHH
Q 000808 2 TLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEF---------VPQRTAAYISQHDVHIGEMTVRETLAFSA 72 (1275)
Q Consensus 2 ~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~---------~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~ 72 (1275)
+.++||||+|||||++.|.=+..|. +|+..+.|...+-. ..|+.+|+|+|+..++|.+||.||+.-+.
T Consensus 31 lvllgpsgagkssllr~lnlle~p~---sg~l~ia~~~fd~s~~~~~k~i~~lr~~vgmvfqqy~lwphltv~enlieap 107 (242)
T COG4161 31 LVLLGPSGAGKSSLLRVLNLLEMPR---SGTLNIAGNHFDFSKTPSDKAIRDLRRNVGMVFQQYNLWPHLTVQENLIEAP 107 (242)
T ss_pred EEEECCCCCchHHHHHHHHHHhCCC---CCeEEecccccccccCccHHHHHHHHHhhhhhhhhhccCchhHHHHHHHhhh
Confidence 5789999999999999998776676 99999988654211 12467999999999999999999997632
Q ss_pred hccCCCCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccch
Q 000808 73 RCQGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKR 152 (1275)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqR 152 (1275)
++-. -+.++++.....++|+.+.|.+.+| +.+-.|||||+||
T Consensus 108 -~kv~--------------------------------gl~~~qa~~~a~ellkrlrl~~~ad-----r~plhlsggqqqr 149 (242)
T COG4161 108 -CRVL--------------------------------GLSKDQALARAEKLLKRLRLKPYAD-----RYPLHLSGGQQQR 149 (242)
T ss_pred -HHHh--------------------------------CCCHHHHHHHHHHHHHHhccccccc-----cCceecccchhhh
Confidence 1100 0112223344567899999987765 5566799999999
Q ss_pred hhHHHHHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhh
Q 000808 153 VTTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPREL 232 (1275)
Q Consensus 153 vsiA~al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~ 232 (1275)
|+|||||+..|++|++||||++|||.-..++++.++++... +.+-++++|..+-+.+.+.+|+.|++|+|++.|+.+.
T Consensus 150 vaiaralmmkpqvllfdeptaaldpeitaqvv~iikel~~t--gitqvivthev~va~k~as~vvyme~g~ive~g~a~~ 227 (242)
T COG4161 150 VAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIKELAET--GITQVIVTHEVEVARKTASRVVYMENGHIVEQGDASC 227 (242)
T ss_pred HHHHHHHhcCCcEEeecCcccccCHHHHHHHHHHHHHHHhc--CceEEEEEeehhHHHhhhhheEeeecCeeEeecchhh
Confidence 99999999999999999999999999999999999998753 4555557888888999999999999999999998754
No 489
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=1.3e-30 Score=291.98 Aligned_cols=195 Identities=17% Similarity=0.264 Sum_probs=151.2
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCC--ceeEEEEECCccCCCc-----cccceEEEeccccccCCCCCHHHHHHHHHh
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKL--KFSGRVTYNGHGMDEF-----VPQRTAAYISQHDVHIGEMTVRETLAFSAR 73 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~--~~~G~v~~~g~~~~~~-----~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~ 73 (1275)
+++|+||||||||||+++|+|..+|.. ..+|+|.++|.++... ..++.++|++|++.+++ +|++||+.+..+
T Consensus 40 ~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~ 118 (258)
T PRK14268 40 VTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDVVELRKNVGMVFQKPNPFP-MSIYDNVAYGPR 118 (258)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchHHHHhhhEEEEecCCccCc-ccHHHHHHHHHH
Confidence 479999999999999999999987510 1389999999876431 12457999999988777 899999998654
Q ss_pred ccCCCCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchh
Q 000808 74 CQGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRV 153 (1275)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv 153 (1275)
..+.. .. +....++++++.+|+....... -++.+..|||||||||
T Consensus 119 ~~~~~----------~~------------------------~~~~~~~~~l~~~~l~~~~~~~-~~~~~~~LSgG~~qrv 163 (258)
T PRK14268 119 IHGAN----------KK------------------------DLDGVVENALRSAALWDETSDR-LKSPALSLSGGQQQRL 163 (258)
T ss_pred HcCCC----------HH------------------------HHHHHHHHHHHHcCCCcchhhh-hcCChhhCCHHHHHHH
Confidence 22110 00 0011245567777774211111 1345668999999999
Q ss_pred hHHHHHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhhH
Q 000808 154 TTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELV 233 (1275)
Q Consensus 154 siA~al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~~ 233 (1275)
+|||||+.+|++++|||||+|||+.++..+.+.++++.+ +.+|++++|+.+++.++||++++|++|++++.|+++++
T Consensus 164 ~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~---~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 240 (258)
T PRK14268 164 CIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKK---DYTIVIVTHNMQQAARISDYTGFFLMGELIEFGQTRQI 240 (258)
T ss_pred HHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhh---CCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999999999999999999998742 35666688888899999999999999999999998776
Q ss_pred H
Q 000808 234 L 234 (1275)
Q Consensus 234 ~ 234 (1275)
.
T Consensus 241 ~ 241 (258)
T PRK14268 241 F 241 (258)
T ss_pred h
Confidence 3
No 490
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=99.97 E-value=8.5e-31 Score=284.97 Aligned_cols=179 Identities=28% Similarity=0.402 Sum_probs=143.4
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCcc---ccceEEEeccccc-cCCCCCHHHHHHHHHhccC
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV---PQRTAAYISQHDV-HIGEMTVRETLAFSARCQG 76 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~~---~~~~~~yv~Q~~~-~~~~lTv~e~l~f~~~~~~ 76 (1275)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++. .++.+|++||+.++....+
T Consensus 29 ~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~~t~~~~l~~~~~~~~ 105 (211)
T cd03225 29 FVLIVGPNGSGKSTLLRLLNGLLGPT---SGEVLVDGKDLTKLSLKELRRKVGLVFQNPDDQFFGPTVEEEVAFGLENLG 105 (211)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEcccCCHHHHHhhceEEecChhhhcCCCcHHHHHHHHHHHcC
Confidence 47999999999999999999999887 999999998775322 2457999999864 3667899999988543211
Q ss_pred CCCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhhHH
Q 000808 77 VGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTG 156 (1275)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA 156 (1275)
.. . .+....++++++.+||++..+ +.+..|||||||||+||
T Consensus 106 ~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~-----~~~~~LSgG~~qrv~la 146 (211)
T cd03225 106 LP----------E------------------------EEIEERVEEALELVGLEGLRD-----RSPFTLSGGQKQRVAIA 146 (211)
T ss_pred CC----------H------------------------HHHHHHHHHHHHHcCcHhhhc-----CCcccCCHHHHHHHHHH
Confidence 00 0 001113456788889875444 34567999999999999
Q ss_pred HHHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCe
Q 000808 157 EMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQ 223 (1275)
Q Consensus 157 ~al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~ 223 (1275)
|||+.+|++++|||||+|||+.++.++.+.++++.+. +++|+.++|+.+++..+||++++|++|+
T Consensus 147 ral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~--~~tvi~~sH~~~~~~~~~d~i~~l~~G~ 211 (211)
T cd03225 147 GVLAMDPDILLLDEPTAGLDPAGRRELLELLKKLKAE--GKTIIIVTHDLDLLLELADRVIVLEDGK 211 (211)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHhCCEEEEEeCCC
Confidence 9999999999999999999999999999999987642 4566668888889999999999999985
No 491
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=1.3e-30 Score=291.55 Aligned_cols=196 Identities=20% Similarity=0.251 Sum_probs=150.1
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCC--ceeEEEEECCccCCCc-----cccceEEEeccccccCCCCCHHHHHHHHHh
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKL--KFSGRVTYNGHGMDEF-----VPQRTAAYISQHDVHIGEMTVRETLAFSAR 73 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~--~~~G~v~~~g~~~~~~-----~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~ 73 (1275)
+++|+||||||||||+++|+|.++|.. ..+|+|.++|+++... ..++.++|++|++.+++ +||+||+.++..
T Consensus 35 ~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~ 113 (254)
T PRK14273 35 ITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDILELRRKIGMVFQTPNPFL-MSIYDNISYGPK 113 (254)
T ss_pred EEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccHHHHhhceEEEeecccccc-CcHHHHHHHHHH
Confidence 479999999999999999999998621 1389999999876421 23467999999987774 899999998653
Q ss_pred ccCCCCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchh
Q 000808 74 CQGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRV 153 (1275)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv 153 (1275)
..+.. + . .+.+..++..++.+++.+... ..-++.++.|||||||||
T Consensus 114 ~~~~~---~---~---------------------------~~~~~~~~~~l~~~~l~~~l~-~~~~~~~~~LSgG~~qrv 159 (254)
T PRK14273 114 IHGTK---D---K---------------------------KKLDEIVEQSLKKSALWNEVK-DKLNTNALSLSGGQQQRL 159 (254)
T ss_pred hcCCC---C---H---------------------------HHHHHHHHHHHHHhCCchhhH-HHHhCCcccCCHHHHHHH
Confidence 22100 0 0 001112345566677632100 011334568999999999
Q ss_pred hHHHHHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhhH
Q 000808 154 TTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELV 233 (1275)
Q Consensus 154 siA~al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~~ 233 (1275)
+|||||+.+|++++|||||+|||+.++..+.+.|+++.+ + .++++++|+.+++.+.+|++++|++|+++..|+++++
T Consensus 160 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--~-~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 236 (254)
T PRK14273 160 CIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLKE--S-YTIIIVTHNMQQAGRISDRTAFFLNGCIEEESSTDEL 236 (254)
T ss_pred HHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhc--C-CEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999999999999999999998742 3 5566688888899999999999999999999998876
Q ss_pred H
Q 000808 234 L 234 (1275)
Q Consensus 234 ~ 234 (1275)
.
T Consensus 237 ~ 237 (254)
T PRK14273 237 F 237 (254)
T ss_pred H
Confidence 4
No 492
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.97 E-value=1.9e-30 Score=286.32 Aligned_cols=191 Identities=24% Similarity=0.399 Sum_probs=155.5
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCcc-ccceEEEeccccccCCCCCHHHHHHHHHhccCCCC
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV-PQRTAAYISQHDVHIGEMTVRETLAFSARCQGVGS 79 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~~-~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~ 79 (1275)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|+.||+.++....+..
T Consensus 27 ~~~i~G~nG~GKStLl~~l~G~~~p~---~G~v~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~- 102 (235)
T cd03299 27 YFVILGPTGSGKSVLLETIAGFIKPD---SGKILLNGKDITNLPPEKRDISYVPQNYALFPHMTVYKNIAYGLKKRKVD- 102 (235)
T ss_pred EEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCEEcCcCChhHcCEEEEeecCccCCCccHHHHHHHHHHHcCCC-
Confidence 47999999999999999999999987 899999998875422 2457999999998898999999998864321100
Q ss_pred cchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhhHHHHH
Q 000808 80 RYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEMM 159 (1275)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~al 159 (1275)
. .+....+.++++.+||++..++. ++.||||||||++||||+
T Consensus 103 ---------~------------------------~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrl~laral 144 (235)
T cd03299 103 ---------K------------------------KEIERKVLEIAEMLGIDHLLNRK-----PETLSGGEQQRVAIARAL 144 (235)
T ss_pred ---------H------------------------HHHHHHHHHHHHHcCChhHHhcC-----cccCCHHHHHHHHHHHHH
Confidence 0 00111245678888997655544 457999999999999999
Q ss_pred hcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhhHH
Q 000808 160 VGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVL 234 (1275)
Q Consensus 160 ~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~~~ 234 (1275)
+.+|++++|||||+|||+.++.++.+.++++.... ++++++++|..+++.+.+|++++|++|++++.|+++++.
T Consensus 145 ~~~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~-~~tili~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 218 (235)
T cd03299 145 VVNPKILLLDEPFSALDVRTKEKLREELKKIRKEF-GVTVLHVTHDFEEAWALADKVAIMLNGKLIQVGKPEEVF 218 (235)
T ss_pred HcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHH
Confidence 99999999999999999999999999999875432 455666788888899999999999999999999887654
No 493
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=99.97 E-value=1.3e-30 Score=291.65 Aligned_cols=196 Identities=21% Similarity=0.282 Sum_probs=150.5
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCC--CCCceeEEEEECCccCCCc-----cccceEEEeccccccCCCCCHHHHHHHHHh
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLD--SKLKFSGRVTYNGHGMDEF-----VPQRTAAYISQHDVHIGEMTVRETLAFSAR 73 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~--~~~~~~G~v~~~g~~~~~~-----~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~ 73 (1275)
+++|+||||||||||+++|+|... |....+|+|.++|+++... ..++.++|++|++.+++ .||+||+.++..
T Consensus 34 ~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~ 112 (253)
T PRK14242 34 VTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVDVVELRRRVGMVFQKPNPFP-KSIFENVAYGLR 112 (253)
T ss_pred EEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccCHHHHhhcEEEEecCCCCCc-CcHHHHHHHHHH
Confidence 479999999999999999999864 1001389999999887431 12467999999988787 599999998654
Q ss_pred ccCCCCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchh
Q 000808 74 CQGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRV 153 (1275)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv 153 (1275)
..+... . ++....++..++.+||.+...+.. ++.++.|||||||||
T Consensus 113 ~~~~~~-----~----------------------------~~~~~~~~~~l~~~~l~~~~~~~~-~~~~~~LSgGq~qrv 158 (253)
T PRK14242 113 VNGVKD-----K----------------------------AYLAERVERSLRHAALWDEVKDRL-HESALGLSGGQQQRL 158 (253)
T ss_pred HcCCCC-----H----------------------------HHHHHHHHHHHHHcCCchhhhHHh-hCCcccCCHHHHHHH
Confidence 321100 0 000112445677777753211112 345678999999999
Q ss_pred hHHHHHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhhH
Q 000808 154 TTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELV 233 (1275)
Q Consensus 154 siA~al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~~ 233 (1275)
+|||||+.+|++++|||||+|||+.++.++.+.|+++. . +.+|++++|+.+++.+++|++++|++|++++.|+++++
T Consensus 159 ~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~-~--~~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 235 (253)
T PRK14242 159 CIARALAVEPEVLLMDEPASALDPIATQKIEELIHELK-A--RYTIIIVTHNMQQAARVSDVTAFFYMGKLIEVGPTEQI 235 (253)
T ss_pred HHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHh-c--CCeEEEEEecHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 99999999999999999999999999999999999873 2 35666688888899999999999999999999988776
Q ss_pred H
Q 000808 234 L 234 (1275)
Q Consensus 234 ~ 234 (1275)
.
T Consensus 236 ~ 236 (253)
T PRK14242 236 F 236 (253)
T ss_pred H
Confidence 3
No 494
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=1.2e-30 Score=289.98 Aligned_cols=189 Identities=25% Similarity=0.324 Sum_probs=152.0
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCC---------ccccceEEEeccccccCCCCCHHHHHHHH
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDE---------FVPQRTAAYISQHDVHIGEMTVRETLAFS 71 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~---------~~~~~~~~yv~Q~~~~~~~lTv~e~l~f~ 71 (1275)
+++|+||||||||||+++|+|..+|+ +|+|.++|.++.. ...++.++|++|++.+++.+||.||+.+.
T Consensus 30 ~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~i~~~ 106 (242)
T PRK11124 30 TLVLLGPSGAGKSSLLRVLNLLEMPR---SGTLNIAGNHFDFSKTPSDKAIRELRRNVGMVFQQYNLWPHLTVQQNLIEA 106 (242)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEecccccccchhhHHHHHhheEEEecCccccCCCcHHHHHHHH
Confidence 47999999999999999999999887 9999999987621 01245799999999999999999999753
Q ss_pred -HhccCCCCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCcccccccccc
Q 000808 72 -ARCQGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQK 150 (1275)
Q Consensus 72 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqr 150 (1275)
....+.. . .+....++++++.+||+...+. .+..||||||
T Consensus 107 ~~~~~~~~----------~------------------------~~~~~~~~~~l~~~gl~~~~~~-----~~~~LS~G~~ 147 (242)
T PRK11124 107 PCRVLGLS----------K------------------------DQALARAEKLLERLRLKPYADR-----FPLHLSGGQQ 147 (242)
T ss_pred HHHHcCCC----------H------------------------HHHHHHHHHHHHHcCChhhhhC-----ChhhCCHHHH
Confidence 2111100 0 0011235667888999765443 4567999999
Q ss_pred chhhHHHHHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecCh
Q 000808 151 KRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPR 230 (1275)
Q Consensus 151 qRvsiA~al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~ 230 (1275)
||++||||++.+|++++|||||+|||+.++..+.+.++++.. . ++++++++|+..++.+++|++++|++|++++.|++
T Consensus 148 qrv~laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tii~~sh~~~~~~~~~d~i~~l~~g~i~~~~~~ 225 (242)
T PRK11124 148 QRVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAE-T-GITQVIVTHEVEVARKTASRVVYMENGHIVEQGDA 225 (242)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHH-c-CCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCH
Confidence 999999999999999999999999999999999999998743 3 45566678888889899999999999999999987
Q ss_pred hhH
Q 000808 231 ELV 233 (1275)
Q Consensus 231 ~~~ 233 (1275)
+++
T Consensus 226 ~~~ 228 (242)
T PRK11124 226 SCF 228 (242)
T ss_pred HHh
Confidence 654
No 495
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=99.97 E-value=2e-30 Score=291.42 Aligned_cols=192 Identities=23% Similarity=0.295 Sum_probs=153.7
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCcc------ccceEEEecccc--ccCCCCCHHHHHHHHH
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV------PQRTAAYISQHD--VHIGEMTVRETLAFSA 72 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~~------~~~~~~yv~Q~~--~~~~~lTv~e~l~f~~ 72 (1275)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++ .+.+.+||+||+.+..
T Consensus 39 ~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~ 115 (265)
T TIGR02769 39 TVGLLGRSGCGKSTLARLLLGLEKPA---QGTVSFRGQDLYQLDRKQRRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPL 115 (265)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEccccCHHHHHHHhhceEEEecChhhhcCCCCCHHHHHHHHH
Confidence 47999999999999999999999887 999999998875432 245799999986 4567899999998754
Q ss_pred hccCCCCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCc-cccccccCCCccccccccccc
Q 000808 73 RCQGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLE-VCDDTLVGDEMVRGISGGQKK 151 (1275)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~~t~vg~~~~~~LSGGqrq 151 (1275)
.... ... ..+....++++++.+||. ...+ +.+..|||||||
T Consensus 116 ~~~~---~~~------------------------------~~~~~~~~~~~l~~~gl~~~~~~-----~~~~~LSgGe~q 157 (265)
T TIGR02769 116 RHLT---SLD------------------------------ESEQKARIAELLDMVGLRSEDAD-----KLPRQLSGGQLQ 157 (265)
T ss_pred HHhc---CCC------------------------------HHHHHHHHHHHHHHcCCChhhhh-----CChhhCCHHHHH
Confidence 3110 000 000112356678888985 3333 445689999999
Q ss_pred hhhHHHHHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChh
Q 000808 152 RVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRE 231 (1275)
Q Consensus 152 RvsiA~al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~ 231 (1275)
||+|||||+.+|++++|||||+|||+.++..+.+.|+++.+.. +++|++++|+.+.+..++|++++|++|++++.|+++
T Consensus 158 rv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~-g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 236 (265)
T TIGR02769 158 RINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAF-GTAYLFITHDLRLVQSFCQRVAVMDKGQIVEECDVA 236 (265)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CcEEEEEeCCHHHHHHHhcEEEEEeCCEEEEECCHH
Confidence 9999999999999999999999999999999999999876532 456666888888999999999999999999999988
Q ss_pred hHH
Q 000808 232 LVL 234 (1275)
Q Consensus 232 ~~~ 234 (1275)
++.
T Consensus 237 ~~~ 239 (265)
T TIGR02769 237 QLL 239 (265)
T ss_pred HHc
Confidence 764
No 496
>COG1101 PhnK ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=99.97 E-value=7.7e-31 Score=263.63 Aligned_cols=205 Identities=23% Similarity=0.341 Sum_probs=164.3
Q ss_pred cccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccCCcccc---cceEEEeccCCC--CC
Q 000808 701 DKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQETF---TRISGYCEQNDI--HS 775 (1275)
Q Consensus 701 ~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~~~~---~~~~~~v~q~~~--~~ 775 (1275)
..+++|+++|++|..|+++.|+|.||||||||+|+|+|... +.+|+|.|+|.++++... ...++-|+|++. .+
T Consensus 17 ~ek~~l~~~sL~I~~g~FvtViGsNGAGKSTlln~iaG~l~--~t~G~I~Idg~dVtk~~~~~RA~~larVfQdp~~gt~ 94 (263)
T COG1101 17 LEKRALNGLSLEIAEGDFVTVIGSNGAGKSTLLNAIAGDLK--PTSGQILIDGVDVTKKSVAKRANLLARVFQDPLAGTA 94 (263)
T ss_pred hHHHHHhcCceeecCCceEEEEcCCCccHHHHHHHhhCccc--cCCceEEECceecccCCHHHHhhHHHHHhcchhhCCc
Confidence 35689999999999999999999999999999999999876 458999999998865322 234567899975 57
Q ss_pred CCCCHHHHHHHHHhccCCCCCC---HHHHHHHHHHHHHH--cCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcE
Q 000808 776 PFVTVYESLLYSAWLRLPPEVD---SETQKMFIEEIMEL--VELNPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSI 850 (1275)
Q Consensus 776 ~~ltv~e~l~~~~~l~~~~~~~---~~~~~~~~~~~l~~--l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~~l~~~p~i 850 (1275)
+.+|+.||+..+..-....... ...+++...+-++. +||++..++.+| -|||||||-+++++|-++.|+|
T Consensus 95 ~~lTieENl~la~~Rg~~rgl~~~ln~~~~~~f~~~l~~l~lgLenrL~~~ig-----lLSGGQRQalsL~MAtl~~pki 169 (263)
T COG1101 95 PELTIEENLALAESRGKKRGLSSALNERRRSSFRERLARLGLGLENRLSDRIG-----LLSGGQRQALSLLMATLHPPKI 169 (263)
T ss_pred ccccHHHHHHHHHhcCcccccchhhhHHHHHHHHHHHhhcccchhhhhcChhh-----hccchHHHHHHHHHHhcCCCcE
Confidence 9999999998765321111111 12233333444444 566777778776 4999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhhhhheeecCcEEEEECC
Q 000808 851 IFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVGP 914 (1275)
Q Consensus 851 lllDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~ 914 (1275)
|+|||-|++|||.++..+++.-.++.++ +.|.+++||..+ +...+-+|.++|++ |+++.+=.
T Consensus 170 LLLDEHTAALDPkta~~vm~lT~kiV~~~klTtlMVTHnm~-~Al~yG~RlImLh~-G~IvlDv~ 232 (263)
T COG1101 170 LLLDEHTAALDPKTAEFVMELTAKIVEEHKLTTLMVTHNME-DALDYGNRLIMLHS-GKIVLDVT 232 (263)
T ss_pred EEecchhhcCCcchHHHHHHHHHHHHHhcCCceEEEeccHH-HHHhhCCeEEEEeC-CeEEEEcc
Confidence 9999999999999999999999998654 789999999986 57788899999985 78887543
No 497
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=99.97 E-value=2.6e-30 Score=320.30 Aligned_cols=206 Identities=26% Similarity=0.365 Sum_probs=163.5
Q ss_pred EEEEEeEEEEEeccchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCceEEEEEEEcCccC
Q 000808 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1275)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~~GaGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 756 (1275)
-++++|++++++ +++.+|+|+|++|++||+++|+|||||||||||++|+|..++ .+|+|.+++
T Consensus 4 ~i~~~nls~~~~------------~~~~il~~is~~i~~Ge~~~liG~NGsGKSTLl~~i~G~~~p--~~G~i~~~~--- 66 (552)
T TIGR03719 4 IYTMNRVSKVVP------------PKKEILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKE--FNGEARPAP--- 66 (552)
T ss_pred EEEEeeEEEecC------------CCCeeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEecC---
Confidence 478899998873 124699999999999999999999999999999999998653 479999875
Q ss_pred CcccccceEEEeccCCCCCCCCCHHHHHHHHHhc-cC-----------CCCCCHH---------------------HHHH
Q 000808 757 KQETFTRISGYCEQNDIHSPFVTVYESLLYSAWL-RL-----------PPEVDSE---------------------TQKM 803 (1275)
Q Consensus 757 ~~~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~l-~~-----------~~~~~~~---------------------~~~~ 803 (1275)
...+||++|++.+++.+||+|++.++... +. ......+ ...+
T Consensus 67 -----~~~i~~v~Q~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (552)
T TIGR03719 67 -----GIKVGYLPQEPQLDPTKTVRENVEEGVAEIKDALDRFNEISAKFAEPDADMDALLAEQAELQEIIDAADAWDLDR 141 (552)
T ss_pred -----CCEEEEEeccCCCCCCCcHHHHHHHhhHHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHHHHHHHhcCcchhHH
Confidence 13589999999999999999999874311 00 0000010 0123
Q ss_pred HHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEE
Q 000808 804 FIEEIMELVELNPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVV 883 (1275)
Q Consensus 804 ~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGerqrv~ia~~l~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi 883 (1275)
+++++++.+|+.. .+..+ ..|||||||||+||++|+.+|++|+|||||++||+.++..+.+.|+++ +.|||
T Consensus 142 ~~~~~l~~~~l~~-~~~~~-----~~LSgGqkqrv~la~al~~~p~lLLLDEPt~~LD~~~~~~l~~~L~~~---~~tvI 212 (552)
T TIGR03719 142 KLEIAMDALRCPP-WDADV-----TKLSGGERRRVALCRLLLSKPDMLLLDEPTNHLDAESVAWLEQHLQEY---PGTVV 212 (552)
T ss_pred HHHHHHhhCCCCc-ccCch-----hhcCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCChHHHHHHHHHHHhC---CCeEE
Confidence 4566777777743 34444 479999999999999999999999999999999999999999999876 35999
Q ss_pred EEecCCCHHHHHhhhhhheeecCcEEE-EECCC
Q 000808 884 CTIHQPSIDIFESFDELFLMKRGGQEI-YVGPL 915 (1275)
Q Consensus 884 ~~~H~~~~~~~~~~d~~~~l~~gg~~~-~~g~~ 915 (1275)
+++|+++ .+...+|++++|.+ |+++ +.|+.
T Consensus 213 iisHd~~-~~~~~~d~v~~l~~-g~i~~~~g~~ 243 (552)
T TIGR03719 213 AVTHDRY-FLDNVAGWILELDR-GRGIPWEGNY 243 (552)
T ss_pred EEeCCHH-HHHhhcCeEEEEEC-CEEEEecCCH
Confidence 9999975 46678999999996 6755 77775
No 498
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=99.97 E-value=1.8e-30 Score=290.20 Aligned_cols=191 Identities=21% Similarity=0.296 Sum_probs=154.9
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCc----------------cccceEEEeccccccCCCCCH
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEF----------------VPQRTAAYISQHDVHIGEMTV 64 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~----------------~~~~~~~yv~Q~~~~~~~lTv 64 (1275)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++|++|++.+++..||
T Consensus 28 ~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv 104 (252)
T TIGR03005 28 KVALIGPSGSGKSTILRILMTLEPID---EGQIQVEGEQLYHMPGRNGPLVPADEKHLRQMRNKIGMVFQSFNLFPHKTV 104 (252)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccccccccchhHHHHHhhCeEEEecCcccCCCCcH
Confidence 47999999999999999999999887 99999999876431 124679999999988999999
Q ss_pred HHHHHHHHhc-cCCCCcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccc
Q 000808 65 RETLAFSARC-QGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVR 143 (1275)
Q Consensus 65 ~e~l~f~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~ 143 (1275)
.||+.++... .+.. . .+....++++++.+|+.+..+ +.+.
T Consensus 105 ~~nl~~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~gl~~~~~-----~~~~ 145 (252)
T TIGR03005 105 LDNVTEAPVLVLGMA----------R------------------------AEAEKRAMELLDMVGLADKAD-----HMPA 145 (252)
T ss_pred HHHHHHHHHHhcCCC----------H------------------------HHHHHHHHHHHHHcCChhHhh-----cChh
Confidence 9999885321 0000 0 001113456788889875544 3456
Q ss_pred cccccccchhhHHHHHhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCe
Q 000808 144 GISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQ 223 (1275)
Q Consensus 144 ~LSGGqrqRvsiA~al~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~ 223 (1275)
.||||||||++|||||+.+|++++|||||+|||+.++..+.+.|++..+. .++++++++|+.+++.+++|++++|++|+
T Consensus 146 ~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~-~~~tiiivsH~~~~~~~~~d~i~~l~~G~ 224 (252)
T TIGR03005 146 QLSGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASE-HDLTMLLVTHEMGFAREFADRVCFFDKGR 224 (252)
T ss_pred hcCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCcEEEEEeCCHHHHHHhcCEEEEEECCE
Confidence 79999999999999999999999999999999999999999999987643 35566668888889999999999999999
Q ss_pred EEEecChhhHH
Q 000808 224 IVYQGPRELVL 234 (1275)
Q Consensus 224 i~~~G~~~~~~ 234 (1275)
+++.|+++++.
T Consensus 225 i~~~g~~~~~~ 235 (252)
T TIGR03005 225 IVEQGKPDEIF 235 (252)
T ss_pred EEEeCCHHHHh
Confidence 99999887664
No 499
>COG4152 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=99.97 E-value=8.8e-31 Score=267.97 Aligned_cols=192 Identities=22% Similarity=0.328 Sum_probs=167.5
Q ss_pred CEEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCccccceEEEeccccccCCCCCHHHHHHHHHhccCCCCc
Q 000808 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFVPQRTAAYISQHDVHIGEMTVRETLAFSARCQGVGSR 80 (1275)
Q Consensus 1 ~~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~ 80 (1275)
|.+++|||||||||++++|+|.++|+ +|+|.++|.+++.. .+.+|||+|++--+++.+||.|.+.|.|+++++..
T Consensus 30 i~GllG~NGAGKTTtfRmILglle~~---~G~I~~~g~~~~~~-~~~rIGyLPEERGLy~k~tv~dql~yla~LkGm~~- 104 (300)
T COG4152 30 IFGLLGPNGAGKTTTFRMILGLLEPT---EGEITWNGGPLSQE-IKNRIGYLPEERGLYPKMTVEDQLKYLAELKGMPK- 104 (300)
T ss_pred EEEeecCCCCCccchHHHHhccCCcc---CceEEEcCcchhhh-hhhhcccChhhhccCccCcHHHHHHHHHHhcCCcH-
Confidence 57899999999999999999999997 99999999987643 24579999999999999999999999999987531
Q ss_pred chhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhhHHHHHh
Q 000808 81 YDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEMMV 160 (1275)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~al~ 160 (1275)
++.+...+..|+.+++..... +++.+||.|.+|++.+-.+++
T Consensus 105 ---------------------------------~e~~~~~~~wLer~~i~~~~~-----~kIk~LSKGnqQKIQfisavi 146 (300)
T COG4152 105 ---------------------------------AEIQKKLQAWLERLEIVGKKT-----KKIKELSKGNQQKIQFISAVI 146 (300)
T ss_pred ---------------------------------HHHHHHHHHHHHhcccccccc-----chHHHhhhhhhHHHHHHHHHh
Confidence 112233567899998876654 446689999999999999999
Q ss_pred cCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhhHHHHH
Q 000808 161 GPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVLDFF 237 (1275)
Q Consensus 161 ~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~~~~~f 237 (1275)
++|++++||||+|||||.+.+-+-+.+.++.. .+.+|+..+|.++.+.++||++++|++|+.+.+|+.++++.-|
T Consensus 147 HePeLlILDEPFSGLDPVN~elLk~~I~~lk~--~GatIifSsH~Me~vEeLCD~llmL~kG~~V~~G~v~~ir~~~ 221 (300)
T COG4152 147 HEPELLILDEPFSGLDPVNVELLKDAIFELKE--EGATIIFSSHRMEHVEELCDRLLMLKKGQTVLYGTVEDIRRSF 221 (300)
T ss_pred cCCCEEEecCCccCCChhhHHHHHHHHHHHHh--cCCEEEEecchHHHHHHHhhhhheecCCceEEeccHHHHHHhc
Confidence 99999999999999999999999999998754 4677777899999999999999999999999999999998744
No 500
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=99.97 E-value=9.5e-31 Score=293.70 Aligned_cols=195 Identities=28% Similarity=0.403 Sum_probs=156.3
Q ss_pred EEEeCCCCCCHHHHHHHHhCCCCCCCceeEEEEECCccCCCcc---ccceEEEeccccccCCCCCHHHHHHHHHhccCCC
Q 000808 2 TLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV---PQRTAAYISQHDVHIGEMTVRETLAFSARCQGVG 78 (1275)
Q Consensus 2 ~~ilG~~GsGKSTLl~~L~G~~~~~~~~~G~v~~~g~~~~~~~---~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~ 78 (1275)
++|+||||||||||.++|.|-.+|. +|.|.+||.+++.-+ ..+.+||.||+-.+|+ .||.|||.= +.
T Consensus 365 lgIIGPSgSGKSTLaR~lvG~w~p~---~G~VRLDga~l~qWd~e~lG~hiGYLPQdVeLF~-GTIaeNIaR---f~--- 434 (580)
T COG4618 365 LGIIGPSGSGKSTLARLLVGIWPPT---SGSVRLDGADLRQWDREQLGRHIGYLPQDVELFD-GTIAENIAR---FG--- 434 (580)
T ss_pred EEEECCCCccHHHHHHHHHcccccC---CCcEEecchhhhcCCHHHhccccCcCcccceecC-CcHHHHHHh---cc---
Confidence 6899999999999999999999887 999999999886543 3478999999876665 699999952 11
Q ss_pred CcchhhhHhhHHHHhcCCCCCCchhHHHHHhhhhcchhhhhHHHHHHHhCCccccccccCCCccccccccccchhhHHHH
Q 000808 79 SRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEM 158 (1275)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~a 158 (1275)
++.|.++..+++.... +.++ .+.|++++||.||+. ..+||||||||+++|||
T Consensus 435 -------------------~~~d~~kIieAA~lAg------vHel--Il~lP~GYdT~iG~~-G~~LSgGQRQRIaLARA 486 (580)
T COG4618 435 -------------------EEADPEKVIEAARLAG------VHEL--ILRLPQGYDTRIGEG-GATLSGGQRQRIALARA 486 (580)
T ss_pred -------------------ccCCHHHHHHHHHHcC------hHHH--HHhCcCCccCccCCC-CCCCCchHHHHHHHHHH
Confidence 1233444444433221 1222 245999999999975 45899999999999999
Q ss_pred HhcCCeEEEEeCCCcccchHHHHHHHHHHHHHhHhcCCEEEEEecCCChhHHhhcccEEEecCCeEEEecChhhHHHHH
Q 000808 159 MVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVLDFF 237 (1275)
Q Consensus 159 l~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~ii~l~~G~i~~~G~~~~~~~~f 237 (1275)
|+++|.+++||||-|+||.....-+.+.+.+.. ..++++|++ +| .+.+...+|+|++|++|++..+|+.+|+....
T Consensus 487 lYG~P~lvVLDEPNsNLD~~GE~AL~~Ai~~~k-~rG~~vvvi-aH-RPs~L~~~Dkilvl~~G~~~~FG~r~eVLa~~ 562 (580)
T COG4618 487 LYGDPFLVVLDEPNSNLDSEGEAALAAAILAAK-ARGGTVVVI-AH-RPSALASVDKILVLQDGRIAAFGPREEVLAKV 562 (580)
T ss_pred HcCCCcEEEecCCCCCcchhHHHHHHHHHHHHH-HcCCEEEEE-ec-CHHHHhhcceeeeecCChHHhcCCHHHHHHHh
Confidence 999999999999999999999999999998864 345565554 43 34688999999999999999999999998754
Done!