Query 000813
Match_columns 1270
No_of_seqs 206 out of 318
Neff 4.0
Searched_HMMs 46136
Date Mon Apr 1 23:58:46 2013
Command hhsearch -i /work/01045/syshi/lefta3m/000813.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/leftcdd/000813hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0916 1,3-beta-glucan syntha 100.0 0E+00 0E+00 3405.5 73.0 1156 42-1267 505-1678(1679)
2 PF02364 Glucan_synthase: 1,3- 100.0 8E-274 2E-278 2397.2 47.7 740 391-1166 1-805 (817)
3 PF02364 Glucan_synthase: 1,3- 98.1 7.7E-07 1.7E-11 110.2 1.6 44 489-532 99-142 (817)
4 KOG0916 1,3-beta-glucan syntha 95.3 0.061 1.3E-06 70.6 9.6 181 1012-1230 1413-1598(1679)
5 PRK11498 bcsA cellulose syntha 78.8 1.5 3.2E-05 57.1 3.2 189 644-850 325-522 (852)
6 PRK11204 N-glycosyltransferase 77.7 3.1 6.8E-05 48.6 5.2 183 585-792 73-257 (420)
7 PRK14583 hmsR N-glycosyltransf 62.2 6.6 0.00014 47.0 3.4 129 644-790 141-276 (444)
8 PF11457 DUF3021: Protein of u 54.5 1.1E+02 0.0024 30.9 10.1 43 1194-1238 56-99 (136)
9 COG1215 Glycosyltransferases, 49.4 12 0.00026 43.5 2.7 166 590-790 80-260 (439)
10 PF15469 Sec5: Exocyst complex 43.1 90 0.002 33.2 7.8 65 216-284 72-139 (182)
11 cd06421 CESA_CelA_like CESA_Ce 41.8 20 0.00044 37.5 2.7 138 644-792 70-208 (234)
12 cd02520 Glucosylceramide_synth 34.6 30 0.00066 36.0 2.7 102 644-792 72-174 (196)
13 PF14518 Haem_oxygenas_2: Iron 30.0 17 0.00037 35.0 -0.0 75 642-736 9-89 (106)
14 TIGR03111 glyc2_xrt_Gpos1 puta 25.7 91 0.002 37.6 5.0 41 645-689 118-159 (439)
15 PF07304 SRA1: Steroid recepto 24.0 5E+02 0.011 27.9 9.4 59 248-314 44-105 (157)
16 PF10569 Thiol-ester_cl: Alpha 24.0 28 0.00061 28.1 0.2 11 811-821 9-19 (31)
17 COG4176 ProW ABC-type proline/ 21.7 5.6E+02 0.012 30.4 9.7 67 1177-1243 61-138 (290)
18 PLN02436 cellulose synthase A 20.2 7.6E+02 0.016 34.1 11.7 225 767-1026 792-1042(1094)
19 PF04156 IncA: IncA protein; 20.1 3.3E+02 0.0072 29.0 7.3 22 1149-1170 9-30 (191)
No 1
>KOG0916 consensus 1,3-beta-glucan synthase/callose synthase catalytic subunit [Cell wall/membrane/envelope biogenesis]
Probab=100.00 E-value=0 Score=3405.46 Aligned_cols=1156 Identities=54% Similarity=0.860 Sum_probs=1090.6
Q ss_pred eeeeEEeeccccchhhhhcccccccccccccccCCcchhhhhhhhhhHHHHhhhhHHHHHHHHHHHHhhhhhhhcccCcc
Q 000813 42 FAYFLQIKPLVKPTRYIVDMDAVEYSWHDFVSRNNHHALAVASLWAPVIAIYLLDIYIFYTLMSAAYGFLLGARDRLGEI 121 (1270)
Q Consensus 42 FSY~~~IkPLv~PT~~i~~~~~~~Y~wh~~~~~~~~N~~~v~~lWaPvvlvY~mD~QIWyai~s~~~G~~~G~~~~lGEI 121 (1270)
|.+..|=|--++| |+|+|+.++|+++|+++|+|||+||+|||||||+|+|+++||++|+|+|||||
T Consensus 505 ~~W~~~pr~~~Gp--------------h~~~~r~~~n~~~v~~~w~Pvv~Vy~mdtqiwy~i~s~lvggivg~f~~lgei 570 (1679)
T KOG0916|consen 505 FEWWFVPRKFPGP--------------HEFFPRFKNNIGVVIANWAPVVLVYFMDTQIWYAIFSTLVGGIVGFFFHLGEI 570 (1679)
T ss_pred HhhhcccccCCCc--------------hhhhHHHHHHHHHHHHHHhhHhheeehhhHHHHHHHHHHHHHHHHHHHHhhee
Confidence 4566666666665 99999999999999999999999999999999999999999999999999999
Q ss_pred cchHHHHHHHhhhhHHHHhhccCCCCCCCCC---CCCcccccccccccccccccHHHHHhhcccccccchhhhhhhccC-
Q 000813 122 RSVEAVHALFEEFPRAFMDTLHVPLPDRTSH---PSSGQAVEKKKFDAARFSPFWNEIIKNLREEDYITNLEMELLLMP- 197 (1270)
Q Consensus 122 R~l~~lr~rF~~~p~aF~~~l~~~~p~~~~~---~~~~~~~~~~~~~~~rFa~~WNeiI~sfReeDlisdrE~~lL~~p- 197 (1270)
|+++ |+.+|+||+.++++.-.+++.. .++.+.+..+++++++|+++||+||.++||||+|||||++++.+|
T Consensus 571 r~~~-----f~~lp~af~~~l~~~~~~r~~~~~~~ft~~~~~~~~~~a~~f~~lWn~vi~a~r~Edyis~~e~~l~i~~l 645 (1679)
T KOG0916|consen 571 RTLS-----FQPLPGAFNAYLKPKESKRKYLANKTFTAKFAPLNGKEAARFALLWNTVILAKREEDYISLRELRLLIRPL 645 (1679)
T ss_pred Eeee-----eeEchHhHhhhcCCCchhhhhhhhhcccccCCCcchHHHHHHHHHHHHHHHHhhhHHhhhccchhhhhccc
Confidence 9999 9999999999997432112211 222455677889999999999999999999999999999999999
Q ss_pred --CCCCCCCccccchhHhcchhHHHHHHHHHhccChH-HHHHHhccChhHHHHHHHHHHHHHHHHHHhcccc--chhHHH
Q 000813 198 --KNSGSLLLVQWPLFLLASKIFYAKDIAVENRDSQD-ELWERISRDEYMKYAVEEFYHTLKFILTETLEAE--GRMWVE 272 (1270)
Q Consensus 198 --~~~~~~~~i~wP~FLla~ki~~Ald~a~~~~~~~~-~l~~~i~~d~y~~~Av~e~y~s~k~il~~ll~~~--~~~~i~ 272 (1270)
.++++.. +||||+ ++|++|||+..++++ +++++|++|+||.|||+|||+|+|+++..++..+ ++.+++
T Consensus 646 ~~~~~~~~~-----~flL~s--~la~~qaK~~~g~~~~~l~~~~~~DtYm~yaV~e~y~Sik~~~~~~i~~~T~~r~i~~ 718 (1679)
T KOG0916|consen 646 STMSSYDCT-----IFLLGS--PLALDQAKILLGKMYLTLLILFFLDTYLWYAVVETYFSIKKSFYLGISILTPWRNIFS 718 (1679)
T ss_pred ccCCcccch-----hHHhcc--HHHHHHHHHhcCchHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhcCchHHHHHH
Confidence 4444443 999999 999999999998765 9999999999999999999999999999999874 889999
Q ss_pred HHHHHHHHHHhcccccceeccCCchhHHHHHHHHHHHhhccCCchhhhhHHHHHHHHHHHHHHhhhccccccccchhhhh
Q 000813 273 RIYDDINVSVEKRSIHVDFQLTKLPLVISRVTALMGVLKEAETPVLQKGAVQAVQDLYDVVRHDVLSINMRENYDTWNLL 352 (1270)
Q Consensus 273 ~i~~~i~~~i~~~~~~~~f~l~~Lp~l~~~~~~L~~~L~~~~~~~~~~~~v~~lq~l~e~v~~d~~~~~~~~~l~~~~~~ 352 (1270)
+++++|+.+|.+.++..+||++.||+++.+++.|+ +.++ -++++|+++|++++|+++++.++.+
T Consensus 719 ri~~rI~~~I~~~~~~~~fk~~vL~~~~~~~i~i~---my~e-------~l~~lq~l~ell~~qv~~e~~~~~~------ 782 (1679)
T KOG0916|consen 719 RLPKRIYSKILATDLEIEFKPKVLPSQIWNAIKIS---MYRE-------HLLALQHLQELLYHQVPSEGGGQTL------ 782 (1679)
T ss_pred HHHHHHHHHHHHhhHHHHhChhhhHHHHhhhhhee---hhHH-------HHHHHHHHHHHHHHHhhhhcccchh------
Confidence 99999999999999999999999999999999988 2221 1999999999999999987743211
Q ss_pred hcccccccccccccCCCCHHHHHHHHHHHHhccccccccCCCCChhhhHhHhhhhccCCCCCCCCccccccccceecccc
Q 000813 353 SKARTEGRLFSKLKWPKDAELKAQVKRLHSLLTIKDSASNIPRNLEARRRLEFFTNSLFMDMPPAKPAREMLSFCVFTPY 432 (1270)
Q Consensus 353 ~~~~~~~~lf~~~~~p~~~~~~~~v~Rl~~lLt~~~sa~~~P~n~EArRRisFFanSL~m~mP~a~~V~~M~sfSVlTPy 432 (1270)
...+.|.+++ +..+ |+++++|+|+||||||+||||||||+||+||||++||||||||||
T Consensus 783 ----~~~~ff~~~~---d~~~--------------~s~~~~P~n~EA~RRisFFa~SL~m~mP~a~~V~~M~sFsVLtP~ 841 (1679)
T KOG0916|consen 783 ----KAPTFFVSQD---DGSF--------------ESAEFVPSNLEARRRISFFANSLFMPMPEAPPVRNMPSFSVLTPY 841 (1679)
T ss_pred ----hcchhheecc---cccc--------------cchhhCCccHHHHHHHHHHHHhhccCCCCCCcccccCceeeeccc
Confidence 1123343333 1212 889999999999999999999999999999999999999999999
Q ss_pred ccceeccchhhhhhcCCCcccHHHHHHhhCchhhhhHHhhhCCCCCCccccccCCchhhHhhhhhhhcccchhhhccccc
Q 000813 433 YSEIVLYSMDELLKKNEDGISILFYLQKIYPDEWKNFLSRIGRDENSQDTELFDSPSDILELRFWASYRAQTLARTVRGM 512 (1270)
Q Consensus 433 Y~E~Vl~S~~eL~~e~edgvsiL~YL~~i~PdEW~NFler~~~~~~~~~~~~~~~~~~~lelRlWAS~RgQTL~RTVrGm 512 (1270)
|+||||||++||++|||||||||+||||||||||+||+||+|+.+++.+.++...||+++|||+||||||||||||||||
T Consensus 842 YsE~vl~S~~el~~e~ed~vsiL~YLqki~pdEW~nFler~k~~~~e~~~dl~~~pe~~l~lR~WaS~RgQTL~RTvrGm 921 (1679)
T KOG0916|consen 842 YSEKVLYSLRELIRENEDGVSILFYLQKIYPDEWKNFLERTKCLAEEKIDDLPFYPEYTLRLRIWASYRGQTLYRTVRGM 921 (1679)
T ss_pred chhhhhhhHHHHhhcccCCeeHHHHHHHhCcHHHHHHHHHhccchhccccccccchhHHHHHHHHHHhccccHHHHHHHH
Confidence 99999999999999999999999999999999999999999999877666777889999999999999999999999999
Q ss_pred ccHHHHHHHHHHhhcCCCcchhhhhcccccCCcchhhhHHHHHHHHhccccEEEEeeccCCCCcCCccchHhHHHHHHhC
Q 000813 513 MYYRKALMLQAYLERMTSGDTEAALSSLDASDTQGFELSREARAHADLKFTYVVTSQIYGKQKEDQKPEAADIALLMQRN 592 (1270)
Q Consensus 513 M~Y~~ALkll~~lE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~a~~KF~yVVscQ~Yg~~k~~~~~~a~dI~~Lm~~~ 592 (1270)
|||+|||||||++|+|++.++.+|++... ..+++++++||++|||||||||+||.||.++|++|+||++||++|
T Consensus 922 MyY~rAlkL~~~~e~~~~~~~~~G~~~~~------~~l~~~l~~~A~~KFtyvVscQ~Y~~~K~~~d~~ae~i~~Lm~~y 995 (1679)
T KOG0916|consen 922 MYYSRALKLLYFLENPEEVDLFEGDSNED------RSLEAELEAMADRKFTYVVSCQRYGNQKFSGDERAENILFLMRAY 995 (1679)
T ss_pred HHHHHHHHHHHHhhcchhhHHhcCCchhh------hHHHHHHHHHHhccceEEEehhHhhhhccCCChHHHHHHHHHHhC
Confidence 99999999999999999999999843211 248999999999999999999999999999999999999999999
Q ss_pred cCcEEEEecccccccCCcccceEEEEEeecC----CCCccceeEEeecCCCCcCCCCCccCcccchhcccccccccccCC
Q 000813 593 EALRVAFIDDVETLKDGKVHREFYSKLVKGD----INGKDKEIYSIKLPGNPKLGEGKPENQNHAVIFTRGNAIQTIDMN 668 (1270)
Q Consensus 593 P~LrVAYide~~~~~~g~~~~~yySvLvk~~----~~g~~~eiYRIkLPG~piLGEGKpeNQNhAiIFtRGE~lQtIDmN 668 (1270)
|+||||||||++++.+++ +++|||+|||++ +||+|+|||||||||||||||||||||||||||||||||||||||
T Consensus 996 p~LriAYide~e~~~~~~-~~~~YS~Lvk~~~~~~~~~~~~~iyrIkLpG~pilGeGKpeNQNhaiiFtRGE~iQtIDmN 1074 (1679)
T KOG0916|consen 996 PSLRIAYIDEVEPPVEEG-EPVYYSVLVKGDCEIDENGLDQEIYRIKLPGPPILGEGKPENQNHAIIFTRGEAIQTIDMN 1074 (1679)
T ss_pred ccceEeeeccccccccCC-CceEEEEeeecCcchhhcccccceEEEeCCCCCcCCCCCCcccCceeeeecchhhheeccc
Confidence 999999999988766555 679999999985 468999999999999999999999999999999999999999999
Q ss_pred ccchHHHHHhhhhhHHHHhhcC-CCCCceeecccceeecccchhhccccccchhhHHHhhhHhhcccccccccccCCccc
Q 000813 669 QDNYFEEALKMRNLLEEFHADH-GIRPPTILGVREHVFTGSVSSLAYFMSNQETSFVTLGQRVLANPLKCRMHYGHPDVF 747 (1270)
Q Consensus 669 QDnYlEEaLKmRNlL~EF~~~~-g~~p~tIlG~REhIFTgsvssLa~f~a~qE~sFvTl~qR~LA~Pl~vR~HYGHPDvf 747 (1270)
|||||||||||||||+||++.+ |.|||||||+|||||||||||||||||||||||||||||+||+|+||||||||||||
T Consensus 1075 QDnYlEE~lKmRnlL~EF~~~~~g~r~ptIlG~RE~IFt~svssLa~fms~qEqSFvTlgqR~LA~p~~vr~HYGHPD~~ 1154 (1679)
T KOG0916|consen 1075 QDNYLEEALKMRNLLQEFEELHLGIRPPTILGAREHIFTGSVSSLAWFMSGQEQSFVTLGQRTLANPGGVRLHYGHPDVF 1154 (1679)
T ss_pred chHHHHHHHHHHHHHHHHHhhcCCCCCCceeeehhheecCCchHHHHHHccCccchhhHHHHHhccccceeeecCCCcHh
Confidence 9999999999999999999999 899999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccCcccccccccccchhhhhhhhhhcccceeeeeeeEEeccccccCcccccceeeeccCCcccccchhhhhhcc
Q 000813 748 DRVFHITRGGISKASRVINISEDIYAGFNTTLRQGNVTHHEYIQVGKGRDVGLNQIAVFEGKVAGGNGEQVLSRDVYRLG 827 (1270)
Q Consensus 748 d~~F~~TRGGiSKAsk~inLSEDIFaG~N~~lRgG~I~H~EYiQcGKGRDvG~~qI~~FeaKIa~GnGEQ~LSRdvyrLG 827 (1270)
||+||+||||||||||||||||||||||||||||||||||||||||||||||||||+|||||||+|||||+|||||||||
T Consensus 1155 drif~~TRGGvSKAsk~inlsEDIfAG~n~tlRgG~itH~EYiQvGKGRDvGlnqI~~FeaKia~G~GEQ~LSRd~YrLG 1234 (1679)
T KOG0916|consen 1155 DRIFHITRGGVSKASKGINLSEDIFAGFNATLRGGNITHHEYIQVGKGRDVGLNQISNFEAKIANGNGEQTLSRDYYRLG 1234 (1679)
T ss_pred hhhhhhccccchHhhcccccchHhhhhhhHHhhCCCcccceeeecccccccCcchhhhhhhhhcCCCcchhhhHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhcCCcceeeecccccCCchhhhhccchhhhHHHHHHhhhH
Q 000813 828 QLFDFFRMMSFYFTTVGYYFCTMLTVLTVYAFLYGKTYLALSGVGEELQVRAQVTENTALTAALNTQFLFQIGIFTAVPM 907 (1270)
Q Consensus 828 ~~ldffRmLSfYyt~~GFy~n~~~~vltVy~fly~~lyLalsg~~~~~~~~~~~~~~~~l~~~l~~q~i~qlg~l~~lPm 907 (1270)
|||||||||||||||||||+|||+||+|||+||||++|+++||+|+.+...+...||++|++||+||+++|+|+++++||
T Consensus 1235 ~~ldffRmLSfyftt~GF~~n~m~ivltVy~Fl~GrlYl~lsg~~~~~~~~~~~~~~~~l~~aL~~qsifqv~~~~~lPm 1314 (1679)
T KOG0916|consen 1235 TQLDFFRMLSFYFTTVGFYFNNMFIVLTVYLFLYGRLYLVLSGYEKDISLTASPRGCYALEPALAWQSIFQVGFIMFLPM 1314 (1679)
T ss_pred ccccHHHHHHHHhccccHHHHhHHHHHHHHHHHHHhHHHHHhhhhhccccccCCCccchHHHHHhhhHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999987778899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcceeEEEEeceeeeeecccccccCeeeeccCCceeEeecchhhhhhhhhhhhHHHH
Q 000813 908 VLGFILEQGFLAAVVNFITMQLQLCSVFFTFSLGTRTHYFGRTILHGGARYQATGRGFVVRHIKFSENYRLYSRSHFVKG 987 (1270)
Q Consensus 908 ~~~~~lE~G~~~A~~~~~~~~l~l~~vFf~F~~gt~~hy~~~~il~GGAkY~aTGRGFvi~h~~F~~lY~~Ya~Shf~~g 987 (1270)
+||+++||||++|+.||+.||+||||+||||+||||+|||+|||+|||||||||||||||.|++|++|||+|||||||||
T Consensus 1315 v~e~~lErGf~~A~~~f~~mqlqLa~vF~tF~~gt~~hy~~rtllhGGAkYr~TGRGFvv~h~~FsenYrlysrshfvkg 1394 (1679)
T KOG0916|consen 1315 VMEIGLERGFLRALSRFIKMQLQLAPVFFTFSLGTYTHYFGRTLLHGGAKYRATGRGFVVFHAKFSENYRLYSRSHFVKG 1394 (1679)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhHheeeeccchhHhhhhHhhcCCeeeeccCcceEEEeccHHHHHHHhhhhHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcccCCcchhHHHHHHHHHHHHHHHhhcccccCCCCcccchhhhhHHhHhhhhccCCCCCCCCCcchh
Q 000813 988 LEVVLLLIVYIAYGYNEGGTLGYILLSISSWFMALSWLFAPYLFNPSGFEWQKVVEDFRDWTNWLFYRGGIGVKGEESWE 1067 (1270)
Q Consensus 988 ~el~llLi~y~~yg~~~~~~~~y~~~t~s~W~~~~s~l~aPF~FNP~gF~w~k~~~D~~dw~~Wl~~~gg~~~~~~~SW~ 1067 (1270)
+|+++||+||.+||+.++++..|+++|+|+||++.|||+|||+||||||+|+|+|+||+||++|+++|||++.++++||+
T Consensus 1395 ~el~lmLlvy~~fg~~~~~~~~y~~~~i~~Wf~v~swlfAPFlFNPsgF~W~~~v~D~~d~~rWl~~rG~~~~~~~~SW~ 1474 (1679)
T KOG0916|consen 1395 SELMLLLLVYQIFGPAYRSSTVYILITISFWFLVGSWLFAPFLFNPSGFEWQKFVDDYRDWIRWLWSRGGIGVHAEKSWE 1474 (1679)
T ss_pred HHHHHHHHHHHHhCccccchHHHHHHHHHHHHHHHHHHhcccccCcccccHHHHHhhHHHHHHHHHhcCCCCCCccccHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999889999999999999
Q ss_pred hchHhhhhhhcc--cccchhhhhhhhhhhhheeeeeEEEeecC-CCCceeeehhHHHHHHHHHHHhhhhhcccc-ccccc
Q 000813 1068 AWWDEELSHIRT--FSGRIAETILSLRFFIFQYGIVYKLNIQG-SDTSLTVYGLSWVVFAVLILLFKVFTFSQK-ISVNF 1143 (1270)
Q Consensus 1068 ~Ww~~e~~~~r~--~rgr~~eiil~lRff~~qygivy~l~i~~-~~~s~~v~~lsw~v~~~~~~i~~~~~~~~~-~~~~~ 1143 (1270)
+||++|++|+++ .+|+++||++++|||+||||++|++|+.. .++++.||++||+++++++++++++.+++| +++++
T Consensus 1475 ~ww~~e~~hl~~~~~~G~~~Ei~l~l~f~~f~~~~~~~ln~~~g~~~~~~v~~~s~~~i~~v~~~~~~~~~~~kk~g~~~ 1554 (1679)
T KOG0916|consen 1475 SWWEEEQEHLTGSGRRGRFLEIILPLRFFFFQYGIVYFLNIQPGTNTSLRVYILSWAPIAAVLFLFKLLGMCRKKFGAVF 1554 (1679)
T ss_pred HHHHHHHHHHhccCccchhHHHHHHHHHHHhhheeeEEEeccCCCCceEeehhhHHHHHHHHHHHHHHHHHHHhhhhhHH
Confidence 999999999998 57999999999999999999999999998 699999999999999999999999999876 88999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHhhhHH
Q 000813 1144 QLLLRFIQGLSLLVALAGLSVAVAITKLSIPDVFACILAFVPTGWGILCIASAWKPLMKKLGLWKSVRSIARLYDAGMGM 1223 (1270)
Q Consensus 1144 ~~~~Rl~~~~l~~~~v~~~~~~~~~~~l~~~d~f~~~lA~i~~g~~il~ia~~~~~~~~~~~~W~~vr~lar~yd~~~G~ 1223 (1270)
|+++|+++++++++++.+++++..++.+++.|+|+|++|++||||+++++++++||++..++.|++++.+||+||++||+
T Consensus 1555 ~~~~r~i~~~~~~~~~~v~~~l~~~~~~~~~d~~~~~la~~~t~~~~l~i~~~~r~~~~~~~~W~~~~~~~~ayd~~mg~ 1634 (1679)
T KOG0916|consen 1555 ALLARFIKVLVFLLFFEVMWVLEGWSFLTTVDLFVSILAFHPTGWGLLLIAQLTREVKKDLGWWSGVWYLARAYDFFMGH 1634 (1679)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhccchhhhhhhHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccchhhhHhhhhhhhhhccchhhhhhhcCCCCC
Q 000813 1224 LIFIPIAMFSWFPFISTFQTRLMFNQAFSRGLEISLILAGNNPN 1267 (1270)
Q Consensus 1224 iif~pia~Lsw~pf~~~~QTRllfN~aFSrgl~is~ilag~~~~ 1267 (1270)
++|+|+|+|+||||+++||||||||||||||||||+||+|++++
T Consensus 1635 li~~p~a~l~w~Pfi~~fqtr~LFn~afSR~l~i~~Il~gk~~~ 1678 (1679)
T KOG0916|consen 1635 LIFFPVAPLSWFPFISEFQTRMLFNQAFSRGLRISRILAGKQKK 1678 (1679)
T ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHhcccccCCcchhhccCccC
Confidence 99999999999999999999999999999999999999999986
No 2
>PF02364 Glucan_synthase: 1,3-beta-glucan synthase component ; InterPro: IPR003440 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This is the glycosyltransferase 48 family GT48 from CAZY, which consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase (2.4.1.34 from EC) also known as callose synthase catalyses the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall []. The reaction catalysed is:- UDP-glucose + {1,3-beta-D-glucosyl}(N) = UDP + {1,3-beta-D-glucosyl}(N+1).; GO: 0003843 1,3-beta-D-glucan synthase activity, 0006075 1,3-beta-D-glucan biosynthetic process, 0000148 1,3-beta-D-glucan synthase complex, 0016020 membrane
Probab=100.00 E-value=7.8e-274 Score=2397.22 Aligned_cols=740 Identities=51% Similarity=0.831 Sum_probs=666.7
Q ss_pred cCCCCChhhhHhHhhhhccCCCCCCCCccccccccceeccccccceeccchhhhhhcCC--CcccHHHHHHhhCchhhhh
Q 000813 391 SNIPRNLEARRRLEFFTNSLFMDMPPAKPAREMLSFCVFTPYYSEIVLYSMDELLKKNE--DGISILFYLQKIYPDEWKN 468 (1270)
Q Consensus 391 ~~~P~n~EArRRisFFanSL~m~mP~a~~V~~M~sfSVlTPyY~E~Vl~S~~eL~~e~e--dgvsiL~YL~~i~PdEW~N 468 (1270)
+++|+|+||||||+||||||+||||+||||++|||||||||||+|||+||++||++||| ||||+|+|||+||||||+|
T Consensus 1 ~~~P~~~EA~RRisFFanSL~~~mP~~~~V~~M~sfsVLtP~Y~E~Vl~Sl~eL~ke~e~~~~vtlL~YLk~l~p~EW~n 80 (817)
T PF02364_consen 1 EFFPRNSEARRRISFFANSLFMPMPEPPPVEKMPSFSVLTPYYSEKVLYSLKELIKENEQNDGVTLLEYLKQLYPDEWEN 80 (817)
T ss_pred CCCCCchHHHHHHHHHHHhcCCCCcCCCchhhccccccccccccceeccCHHHhhhcccccCCccHHHHHHHHChHHHHH
Confidence 46999999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred HHhhhCCCCCCccc--------c-----------c--------cCCchhhHhhhhhhhcccchhhhcccccccHHHHHHH
Q 000813 469 FLSRIGRDENSQDT--------E-----------L--------FDSPSDILELRFWASYRAQTLARTVRGMMYYRKALML 521 (1270)
Q Consensus 469 Fler~~~~~~~~~~--------~-----------~--------~~~~~~~lelRlWAS~RgQTL~RTVrGmM~Y~~ALkl 521 (1270)
|+||+|+..++.+. + + ...|++++|+|+|||+|||||||||+|||||++|||+
T Consensus 81 F~er~k~~~~e~~~~~~~~~~~~~~~was~r~qtL~rtv~Gfm~~~~a~~LrtrLWASlR~QTLyRTV~G~m~y~~Alkl 160 (817)
T PF02364_consen 81 FVERTKRLAEESDAEESSEKEEELRLWASYRGQTLPRTVRGFMYYEPAYTLRTRLWASLRGQTLYRTVSGFMNYSKALKL 160 (817)
T ss_pred HHHHhcccchhhhhhccccchhhhhHHHHhcccCCCchhhhhhhhhHHHHHHhhhhhccHHHhhhhhhhhhhhHHHHHhh
Confidence 99999976533211 1 0 2357899999999999999999999999999999999
Q ss_pred HHHhhcCCCcchhhhhcccccCCcchhhhHHHHHHHHhccccEEEEeeccCCCCcCCccchHhHHHHHHhCcCcEEEEec
Q 000813 522 QAYLERMTSGDTEAALSSLDASDTQGFELSREARAHADLKFTYVVTSQIYGKQKEDQKPEAADIALLMQRNEALRVAFID 601 (1270)
Q Consensus 522 l~~lE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~a~~KF~yVVscQ~Yg~~k~~~~~~a~dI~~Lm~~~P~LrVAYid 601 (1270)
|+++|+++..+..+++ . +.++++++++|++||+||||||+||+|| +++|+||+.||++||+|||||||
T Consensus 161 l~~~e~~~~~~~~~~~-------~--~~~~~~~~~~a~~KF~yVVs~Q~yg~~~---~~~a~~i~~Lm~~~P~LrVAYid 228 (817)
T PF02364_consen 161 LYRVENPSIEQMFGGN-------Y--ESLERELEAMADRKFTYVVSCQRYGKFK---KEEAEDIEFLMRAYPSLRVAYID 228 (817)
T ss_pred HhhccCCchhhhccCc-------h--HHHHHHHHHHHhcCCCEEEecchhcCCC---hHHHHHHHHHHHhCCceEEEEEe
Confidence 9999999987765542 1 4577899999999999999999999999 77899999999999999999999
Q ss_pred ccccccCCcccceEEEEEeecC----CCCccceeEEeecCCCCcCCCCCccCcccchhcccccccccccCCccchHHHHH
Q 000813 602 DVETLKDGKVHREFYSKLVKGD----INGKDKEIYSIKLPGNPKLGEGKPENQNHAVIFTRGNAIQTIDMNQDNYFEEAL 677 (1270)
Q Consensus 602 e~~~~~~g~~~~~yySvLvk~~----~~g~~~eiYRIkLPG~piLGEGKpeNQNhAiIFtRGE~lQtIDmNQDnYlEEaL 677 (1270)
|+++.++|+ +++|||||||++ ++|+++|+||||||||||||||||||||||||||||||+|||||||||||||||
T Consensus 229 e~~~~~~~~-~~~yYS~Lv~~~~~~~~~g~~~~~yri~LpG~pilGeGK~eNQNhaiiF~rGe~lQ~IDmNQDnYleE~l 307 (817)
T PF02364_consen 229 EVPDRNGGG-EPEYYSVLVKGDCEIDENGKRQEIYRIKLPGNPILGEGKPENQNHAIIFTRGEYLQTIDMNQDNYLEEAL 307 (817)
T ss_pred eecccCCCC-CceEEEEEecCCccccccCcccceEEEECCCCCcCCCCCccccceeEEEEccccccccccchhhhHHHHH
Confidence 998665554 799999999985 479999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhHHHHhhcCC--------------CCCceeecccceeecccchhhccccccchhhHHHhhhHhhcccccccccccC
Q 000813 678 KMRNLLEEFHADHG--------------IRPPTILGVREHVFTGSVSSLAYFMSNQETSFVTLGQRVLANPLKCRMHYGH 743 (1270)
Q Consensus 678 KmRNlL~EF~~~~g--------------~~p~tIlG~REhIFTgsvssLa~f~a~qE~sFvTl~qR~LA~Pl~vR~HYGH 743 (1270)
||||||+||++.++ .+||||||+|||||||||||||||||+||||||||+||+||+|+ |||||||
T Consensus 308 K~rnlL~Ef~~~~~~~~~~~~~~~~~~~~~~~aIlG~RE~IFs~~vg~L~~~aa~qE~~F~Tl~qR~la~p~-~rlHYGH 386 (817)
T PF02364_consen 308 KMRNLLEEFEEMHGDSSSPYIPGIEEEGKRPVAILGFREHIFSENVGSLGDFAAGQEQSFGTLFQRTLANPL-VRLHYGH 386 (817)
T ss_pred HHHHHHHHHHhcCCCCCCCCCCCccccCCCCceEecccceEecCCcchHHHHhhhhhHHHHHHHHHHHhcch-hhccCCC
Confidence 99999999998765 68999999999999999999999999999999999999999999 9999999
Q ss_pred CcccccccccccCcccccccccccchhhhhhhhhhcccceeeeeeeEEeccccccCcccccceeeeccCCcccccchhhh
Q 000813 744 PDVFDRVFHITRGGISKASRVINISEDIYAGFNTTLRQGNVTHHEYIQVGKGRDVGLNQIAVFEGKVAGGNGEQVLSRDV 823 (1270)
Q Consensus 744 PDvfd~~F~~TRGGiSKAsk~inLSEDIFaG~N~~lRgG~I~H~EYiQcGKGRDvG~~qI~~FeaKIa~GnGEQ~LSRdv 823 (1270)
||||||+||+||||||||||||||||||||||||+|||||||||||||||||||||||||++||||||+|||||+||||+
T Consensus 387 PD~~n~~f~~TRGGvSKAsk~lhLsEDIfaG~n~~lRGG~i~h~ey~qcGKGRD~Gf~~I~~F~~KI~~G~GEQ~LSRe~ 466 (817)
T PF02364_consen 387 PDVFNRIFMTTRGGVSKASKGLHLSEDIFAGMNATLRGGRIKHCEYIQCGKGRDVGFNSILNFETKIASGMGEQMLSREY 466 (817)
T ss_pred chhhhhhheeccCccchHhhcccccHHHHHHHHHHhcCCceeehhhhhcccccccCchhhhhhHhHhcCCccchhhhHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccccchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhcCCcceeeeccc------ccCCchhhhhcc-----
Q 000813 824 YRLGQLFDFFRMMSFYFTTVGYYFCTMLTVLTVYAFLYGKTYLALSGVGEELQVRAQ------VTENTALTAALN----- 892 (1270)
Q Consensus 824 yrLG~~ldffRmLSfYyt~~GFy~n~~~~vltVy~fly~~lyLalsg~~~~~~~~~~------~~~~~~l~~~l~----- 892 (1270)
|||||||||||||||||||||||+|||+||+|||+|+|+.++|+....+...+.... ..||.+|+++++
T Consensus 467 yrLg~~ld~~R~LSfyy~~~Gf~~n~~~i~lsv~~f~~~~~~L~~l~~~~~~~~~~~~~~~~~~~g~~~l~p~~~~~~~~ 546 (817)
T PF02364_consen 467 YRLGTRLDFFRFLSFYYAHPGFYINNMFIVLSVYLFLYVYLNLSGLEHESIICAYDKNTDVLEPIGCYNLQPVLDWIARN 546 (817)
T ss_pred HHhhccCCHHHHHHHHhcCccHhHhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCccCCcccccccHHHHHHHHH
Confidence 999999999999999999999999999999999999995554444433332332221 257999999754
Q ss_pred chhhhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhhhcceeEEEEeceeeeeecccccccCeeeeccCCceeEeecch
Q 000813 893 TQFLFQIGIFTAVPMVLGFILEQGFLAAVVNFITMQLQLCSVFFTFSLGTRTHYFGRTILHGGARYQATGRGFVVRHIKF 972 (1270)
Q Consensus 893 ~q~i~qlg~l~~lPm~~~~~lE~G~~~A~~~~~~~~l~l~~vFf~F~~gt~~hy~~~~il~GGAkY~aTGRGFvi~h~~F 972 (1270)
+|+++|+|+++++||++|+++|+|+++|+.+|+.||+|+||+||||+||||+|||++||+|||||||||||||||+|++|
T Consensus 547 ~~si~q~g~l~~lPl~~q~~lE~G~~~A~~~~~~~~lslsp~F~vF~~qt~a~~~~~~l~~GGAkYiaTGRGF~i~r~~F 626 (817)
T PF02364_consen 547 VQSIFQLGFLSFLPLIVQELLERGFWKALTRFFKHQLSLSPVFEVFSCQTYAHYFGRTLLHGGAKYIATGRGFVITRIPF 626 (817)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcccchheeeeeehhhhhhhhhhhcCccEEEecCCceEEEeccH
Confidence 59999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhhhHHHHHHHHHHHHHHHHhcccCCcchhHHHHHHHHHHHHHHHhhcccccCCCCcccchhhhhHHhHhhhh
Q 000813 973 SENYRLYSRSHFVKGLEVVLLLIVYIAYGYNEGGTLGYILLSISSWFMALSWLFAPYLFNPSGFEWQKVVEDFRDWTNWL 1052 (1270)
Q Consensus 973 ~~lY~~Ya~Shf~~g~el~llLi~y~~yg~~~~~~~~y~~~t~s~W~~~~s~l~aPF~FNP~gF~w~k~~~D~~dw~~Wl 1052 (1270)
++||++|||||||+|+|+++||++|.++ +|++.|||+|++++|||+||||||||||+|+|+++||+||++||
T Consensus 627 ~~lY~~YA~Sh~y~G~el~llLl~~~~~--------~y~~~~~~~W~~v~sll~aPFiFNP~~F~w~~~~~Dy~dw~~Wl 698 (817)
T PF02364_consen 627 AELYSRYARSHFYKGFELLLLLLFYTLT--------MYIPATLSFWFLVISLLFAPFIFNPHQFDWQKFFVDYRDWLRWL 698 (817)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHhcCcccCchhHHHHhHHHHHHHH
Confidence 9999999999999999999999887654 89999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCcchhhchHhhhhhhcccccchhhhhhhhhhhhheeeeeEEEeecCCCCceeeehhHHHHHH----HHHH
Q 000813 1053 FYRGGIGVKGEESWEAWWDEELSHIRTFSGRIAETILSLRFFIFQYGIVYKLNIQGSDTSLTVYGLSWVVFA----VLIL 1128 (1270)
Q Consensus 1053 ~~~gg~~~~~~~SW~~Ww~~e~~~~r~~rgr~~eiil~lRff~~qygivy~l~i~~~~~s~~v~~lsw~v~~----~~~~ 1128 (1270)
++ |+++++++||++||++|++|+...++|++|++.+.+..-.. ..+.....++.+++. ++.+
T Consensus 699 ~~--g~~~~~~~SW~~w~~~~~~~~tg~k~k~~~~~~e~~~~~~~------------r~~~~~~~~~ei~~~l~~~~~~~ 764 (817)
T PF02364_consen 699 SR--GNSRPHDNSWISWWREERSRITGFKRKILEDISEKRFGDHL------------RASFFNLLFSEIILPLRFFIFQF 764 (817)
T ss_pred hc--CCCCccccccHHHHHHHHHHhccccceeeccchhccccccc------------cceeeehhHHHHHHHHHHHHHHH
Confidence 83 88999999999999999999999999999988776532211 122333334444433 2333
Q ss_pred Hhhhhhccccc---cccchhHHHHHHHHHHHHHHHHHHHHh
Q 000813 1129 LFKVFTFSQKI---SVNFQLLLRFIQGLSLLVALAGLSVAV 1166 (1270)
Q Consensus 1129 i~~~~~~~~~~---~~~~~~~~Rl~~~~l~~~~v~~~~~~~ 1166 (1270)
+.+.+..+++. +...+.++|+++.+++|+++.+++++.
T Consensus 765 ~~y~finsq~~~~~~~~~n~l~Rl~i~~~~pI~~n~~vl~~ 805 (817)
T PF02364_consen 765 IAYLFINSQNGVKSSQPVNSLLRLLIVTLIPIAVNAVVLLV 805 (817)
T ss_pred hhheEEEcccCCCCCcccchHHHHHHHHHHHHHHHHHHHHH
Confidence 33444556653 356789999999999888777555543
No 3
>PF02364 Glucan_synthase: 1,3-beta-glucan synthase component ; InterPro: IPR003440 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This is the glycosyltransferase 48 family GT48 from CAZY, which consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase (2.4.1.34 from EC) also known as callose synthase catalyses the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall []. The reaction catalysed is:- UDP-glucose + {1,3-beta-D-glucosyl}(N) = UDP + {1,3-beta-D-glucosyl}(N+1).; GO: 0003843 1,3-beta-D-glucan synthase activity, 0006075 1,3-beta-D-glucan biosynthetic process, 0000148 1,3-beta-D-glucan synthase complex, 0016020 membrane
Probab=98.13 E-value=7.7e-07 Score=110.22 Aligned_cols=44 Identities=52% Similarity=0.786 Sum_probs=40.1
Q ss_pred hhhHhhhhhhhcccchhhhcccccccHHHHHHHHHHhhcCCCcc
Q 000813 489 SDILELRFWASYRAQTLARTVRGMMYYRKALMLQAYLERMTSGD 532 (1270)
Q Consensus 489 ~~~lelRlWAS~RgQTL~RTVrGmM~Y~~ALkll~~lE~~~~~~ 532 (1270)
+...++|.|||+|||||.|||+|||||++|++|+++++.....+
T Consensus 99 ~~~~~~~~was~r~qtL~rtv~Gfm~~~~a~~LrtrLWASlR~Q 142 (817)
T PF02364_consen 99 EKEEELRLWASYRGQTLPRTVRGFMYYEPAYTLRTRLWASLRGQ 142 (817)
T ss_pred cchhhhhHHHHhcccCCCchhhhhhhhhHHHHHHhhhhhccHHH
Confidence 35678999999999999999999999999999999999987653
No 4
>KOG0916 consensus 1,3-beta-glucan synthase/callose synthase catalytic subunit [Cell wall/membrane/envelope biogenesis]
Probab=95.30 E-value=0.061 Score=70.56 Aligned_cols=181 Identities=15% Similarity=0.177 Sum_probs=113.5
Q ss_pred HHHHHHHHHHHHHh-hcccccCCCCcccchhh--hhHHhHhhhhccCCCCCCCCCcchhhchHhhhhhhcccccchhhhh
Q 000813 1012 LLSISSWFMALSWL-FAPYLFNPSGFEWQKVV--EDFRDWTNWLFYRGGIGVKGEESWEAWWDEELSHIRTFSGRIAETI 1088 (1270)
Q Consensus 1012 ~~t~s~W~~~~s~l-~aPF~FNP~gF~w~k~~--~D~~dw~~Wl~~~gg~~~~~~~SW~~Ww~~e~~~~r~~rgr~~eii 1088 (1270)
..+.|.-.++..|. ..-++|-|.-|.-..+- +=+.||..|+.==+..|....+.=.|| ....+..+.+++
T Consensus 1413 ~~~~y~~~~i~~Wf~v~swlfAPFlFNPsgF~W~~~v~D~~d~~rWl~~rG~~~~~~~~SW----~~ww~~e~~hl~--- 1485 (1679)
T KOG0916|consen 1413 SSTVYILITISFWFLVGSWLFAPFLFNPSGFEWQKFVDDYRDWIRWLWSRGGIGVHAEKSW----ESWWEEEQEHLT--- 1485 (1679)
T ss_pred chHHHHHHHHHHHHHHHHHHhcccccCcccccHHHHHhhHHHHHHHHHhcCCCCCCccccH----HHHHHHHHHHHh---
Confidence 33334444444554 45799999999998653 456789999952223333333333366 566666677776
Q ss_pred hhhhhhhheeeeeEEEeecCCCCceeeehhHHHHHHHHHHHhhhhhcccccccc-chhHHHHHHHHHHHHHHHHHHHHhh
Q 000813 1089 LSLRFFIFQYGIVYKLNIQGSDTSLTVYGLSWVVFAVLILLFKVFTFSQKISVN-FQLLLRFIQGLSLLVALAGLSVAVA 1167 (1270)
Q Consensus 1089 l~lRff~~qygivy~l~i~~~~~s~~v~~lsw~v~~~~~~i~~~~~~~~~~~~~-~~~~~Rl~~~~l~~~~v~~~~~~~~ 1167 (1270)
+|+.+ |. +..+++...++++..-.+..-...+ .+..+|+.....++++++.+++
T Consensus 1486 ------------~~~~~--G~--------~~Ei~l~l~f~~f~~~~~~~ln~~~g~~~~~~v~~~s~~~i~~v~~~~--- 1540 (1679)
T KOG0916|consen 1486 ------------GSGRR--GR--------FLEIILPLRFFFFQYGIVYFLNIQPGTNTSLRVYILSWAPIAAVLFLF--- 1540 (1679)
T ss_pred ------------ccCcc--ch--------hHHHHHHHHHHHhhheeeEEEeccCCCCceEeehhhHHHHHHHHHHHH---
Confidence 33222 11 4555555555544322222222222 4566777777766655532221
Q ss_pred hcCCCC-chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHhhhHHHHHHHHH
Q 000813 1168 ITKLSI-PDVFACILAFVPTGWGILCIASAWKPLMKKLGLWKSVRSIARLYDAGMGMLIFIPIA 1230 (1270)
Q Consensus 1168 ~~~l~~-~d~f~~~lA~i~~g~~il~ia~~~~~~~~~~~~W~~vr~lar~yd~~~G~iif~pia 1230 (1270)
.-++. ++.+.+.+|.++|+..++.++..+ .+++.+..|...+.+ |.+..++.|.|..
T Consensus 1541 -~~~~~~~kk~g~~~~~~~r~i~~~~~~~~~-~v~~~l~~~~~~~~~----d~~~~~la~~~t~ 1598 (1679)
T KOG0916|consen 1541 -KLLGMCRKKFGAVFALLARFIKVLVFLLFF-EVMWVLEGWSFLTTV----DLFVSILAFHPTG 1598 (1679)
T ss_pred -HHHHHHHhhhhhHHHHHHHHHHHHHHHHHH-HHHHHHHHHhcccHH----HHHHHHHHHhhHH
Confidence 12333 678999999999999999988887 999999999999887 7777888777763
No 5
>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional
Probab=78.79 E-value=1.5 Score=57.06 Aligned_cols=189 Identities=15% Similarity=0.171 Sum_probs=111.6
Q ss_pred CCCccCcccchhcccccccccccCCccchHHHHHhhhhhHHHHhhcCCCCCceeecccceeeccc-----chhhcccccc
Q 000813 644 EGKPENQNHAVIFTRGNAIQTIDMNQDNYFEEALKMRNLLEEFHADHGIRPPTILGVREHVFTGS-----VSSLAYFMSN 718 (1270)
Q Consensus 644 EGKpeNQNhAiIFtRGE~lQtIDmNQDnYlEEaLKmRNlL~EF~~~~g~~p~tIlG~REhIFTgs-----vssLa~f~a~ 718 (1270)
.||..|-|||+=.++||++=+.|++. ..+.-. .++++..|.++ +.+.+|+.+=+.++.. .+....+..-
T Consensus 325 ~gKAGnLN~aL~~a~GEyIavlDAD~--ip~pdf-L~~~V~~f~~d---P~VglVQtp~~f~n~dp~~rnl~~~~~~~~e 398 (852)
T PRK11498 325 HAKAGNINNALKYAKGEFVAIFDCDH--VPTRSF-LQMTMGWFLKD---KKLAMMQTPHHFFSPDPFERNLGRFRKTPNE 398 (852)
T ss_pred cchHHHHHHHHHhCCCCEEEEECCCC--CCChHH-HHHHHHHHHhC---CCeEEEEcceeccCCchHHHhhHHHhhcccc
Confidence 37999999999999999999999953 332211 22444455544 3578888776655432 1211122222
Q ss_pred chhhHHHhhhHhhcccccccccccCCcccccccccccCcccccccccccchhhhhhhhhhcccceeeeee-eEEeccccc
Q 000813 719 QETSFVTLGQRVLANPLKCRMHYGHPDVFDRVFHITRGGISKASRVINISEDIYAGFNTTLRQGNVTHHE-YIQVGKGRD 797 (1270)
Q Consensus 719 qE~sFvTl~qR~LA~Pl~vR~HYGHPDvfd~~F~~TRGGiSKAsk~inLSEDIFaG~N~~lRgG~I~H~E-YiQcGKGRD 797 (1270)
+| .|-...|+-... ....+--|+-=++.|.-...=||..-- -++||.--++....+|-++.+.. =...|-
T Consensus 399 ~~-~fy~~iq~g~~~-~~a~~~~Gs~aviRReaLeeVGGfd~~----titED~dlslRL~~~Gyrv~yl~~~~a~gl--- 469 (852)
T PRK11498 399 GT-LFYGLVQDGNDM-WDATFFCGSCAVIRRKPLDEIGGIAVE----TVTEDAHTSLRLHRRGYTSAYMRIPQAAGL--- 469 (852)
T ss_pred hh-HHHHHHHhHHHh-hcccccccceeeeEHHHHHHhcCCCCC----ccCccHHHHHHHHHcCCEEEEEeccceeEE---
Confidence 22 343455543322 334445577667777767777888642 37999999999888998988864 333332
Q ss_pred cCccccccee---eeccCCcccccchhhhhhcccccchhhhhhhhccccchhhhHH
Q 000813 798 VGLNQIAVFE---GKVAGGNGEQVLSRDVYRLGQLFDFFRMMSFYFTTVGYYFCTM 850 (1270)
Q Consensus 798 vG~~qI~~Fe---aKIa~GnGEQ~LSRdvyrLG~~ldffRmLSfYyt~~GFy~n~~ 850 (1270)
.=.++..+- .+-+.| ..|.+.++---++..+.+..=+ +|....=++++.+
T Consensus 470 -aPesl~~~~~QR~RWarG-~lQi~r~~~pl~~~gL~~~qRl-~y~~~~l~~l~g~ 522 (852)
T PRK11498 470 -ATESLSAHIGQRIRWARG-MVQIFRLDNPLTGKGLKLAQRL-CYANAMLHFLSGI 522 (852)
T ss_pred -CCCCHHHHHHHHHHHHHH-HHHHHHHhChhccCCCCHHHHH-HHHHHHHHHHHHH
Confidence 223455442 345667 4777766544567777774333 3333333444443
No 6
>PRK11204 N-glycosyltransferase; Provisional
Probab=77.66 E-value=3.1 Score=48.64 Aligned_cols=183 Identities=18% Similarity=0.159 Sum_probs=92.0
Q ss_pred HHHHH-HhCcCcEEEEecccccccCCcccceEEEEEeecCCCCccceeEEeecCCCCcCCCCCccCcccchhcccccccc
Q 000813 585 IALLM-QRNEALRVAFIDDVETLKDGKVHREFYSKLVKGDINGKDKEIYSIKLPGNPKLGEGKPENQNHAVIFTRGNAIQ 663 (1270)
Q Consensus 585 I~~Lm-~~~P~LrVAYide~~~~~~g~~~~~yySvLvk~~~~g~~~eiYRIkLPG~piLGEGKpeNQNhAiIFtRGE~lQ 663 (1270)
++.++ +.||+.+|--||.-.+++..+ .++.-. .+...+--++.+.| .||+.|-|+|+-.++||++=
T Consensus 73 l~sl~~q~yp~~eiiVvdD~s~d~t~~--------~l~~~~-~~~~~v~~i~~~~n----~Gka~aln~g~~~a~~d~i~ 139 (420)
T PRK11204 73 ISHLLALRYPNYEVIAINDGSSDNTGE--------ILDRLA-AQIPRLRVIHLAEN----QGKANALNTGAAAARSEYLV 139 (420)
T ss_pred HHHHHhCCCCCeEEEEEECCCCccHHH--------HHHHHH-HhCCcEEEEEcCCC----CCHHHHHHHHHHHcCCCEEE
Confidence 44444 468988888887643211100 011000 01111333444554 48999999999999999999
Q ss_pred cccCCccchH-HHHHhhhhhHHHHhhcCCCCCceeecccceeecccchhhccccccchhhHHHhhhHhhccccccccccc
Q 000813 664 TIDMNQDNYF-EEALKMRNLLEEFHADHGIRPPTILGVREHVFTGSVSSLAYFMSNQETSFVTLGQRVLANPLKCRMHYG 742 (1270)
Q Consensus 664 tIDmNQDnYl-EEaLKmRNlL~EF~~~~g~~p~tIlG~REhIFTgsvssLa~f~a~qE~sFvTl~qR~LA~Pl~vR~HYG 742 (1270)
.+|.+ +.+ .++| +++++.|++++ .+.+++.+=.+-. ..+.++....++-.+...+.++.....-.+-..-|
T Consensus 140 ~lDaD--~~~~~d~L--~~l~~~~~~~~---~v~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 211 (420)
T PRK11204 140 CIDGD--ALLDPDAA--AYMVEHFLHNP---RVGAVTGNPRIRN-RSTLLGRIQVGEFSSIIGLIKRAQRVYGRVFTVSG 211 (420)
T ss_pred EECCC--CCCChhHH--HHHHHHHHhCC---CeEEEECCceecc-chhHHHHHHHHHHHHhhhHHHHHHHHhCCceEecc
Confidence 98765 444 2333 35666776543 3444443222221 12223332222222222122221111000000112
Q ss_pred CCcccccccccccCcccccccccccchhhhhhhhhhcccceeeeeeeEEe
Q 000813 743 HPDVFDRVFHITRGGISKASRVINISEDIYAGFNTTLRQGNVTHHEYIQV 792 (1270)
Q Consensus 743 HPDvfd~~F~~TRGGiSKAsk~inLSEDIFaG~N~~lRgG~I~H~EYiQc 792 (1270)
+==.+.|.....-||...- .++||.--++-...+|.++.++.-..|
T Consensus 212 ~~~~~rr~~l~~vgg~~~~----~~~ED~~l~~rl~~~G~~i~~~p~~~~ 257 (420)
T PRK11204 212 VITAFRKSALHEVGYWSTD----MITEDIDISWKLQLRGWDIRYEPRALC 257 (420)
T ss_pred eeeeeeHHHHHHhCCCCCC----cccchHHHHHHHHHcCCeEEeccccEE
Confidence 2223333333344665432 368999999999889999988876555
No 7
>PRK14583 hmsR N-glycosyltransferase; Provisional
Probab=62.17 E-value=6.6 Score=46.97 Aligned_cols=129 Identities=19% Similarity=0.153 Sum_probs=69.0
Q ss_pred CCCccCcccchhcccccccccccCCccchHHHHHhhhhhHHHHhhcCCCCCceeecccceeecccchhhccccccchhhH
Q 000813 644 EGKPENQNHAVIFTRGNAIQTIDMNQDNYFEEALKMRNLLEEFHADHGIRPPTILGVREHVFTGSVSSLAYFMSNQETSF 723 (1270)
Q Consensus 644 EGKpeNQNhAiIFtRGE~lQtIDmNQDnYlEEaLKmRNlL~EF~~~~g~~p~tIlG~REhIFTgsvssLa~f~a~qE~sF 723 (1270)
.||+.+.|+|+..++||++-++|+. +.++.- -++.+.+.|++++ .+.+++.+-.+...+ +.++....++-.++
T Consensus 141 ~Gka~AlN~gl~~a~~d~iv~lDAD--~~~~~d-~L~~lv~~~~~~~---~~g~v~g~~~~~~~~-~~~~~~~~~e~~~~ 213 (444)
T PRK14583 141 QGKAIALRMGAAAARSEYLVCIDGD--ALLDKN-AVPYLVAPLIANP---RTGAVTGNPRIRTRS-TLIGRVQVGEFSSI 213 (444)
T ss_pred CCHHHHHHHHHHhCCCCEEEEECCC--CCcCHH-HHHHHHHHHHhCC---CeEEEEccceecCCC-cchhhHHHHHHHHH
Confidence 4799999999999999999998874 444322 2335556665432 233443322222221 22222222221222
Q ss_pred HHhhhHhhcccccccccccCCcc-------cccccccccCcccccccccccchhhhhhhhhhcccceeeeeeeE
Q 000813 724 VTLGQRVLANPLKCRMHYGHPDV-------FDRVFHITRGGISKASRVINISEDIYAGFNTTLRQGNVTHHEYI 790 (1270)
Q Consensus 724 vTl~qR~LA~Pl~vR~HYGHPDv-------fd~~F~~TRGGiSKAsk~inLSEDIFaG~N~~lRgG~I~H~EYi 790 (1270)
..+.+|... .||.+-. |.|.-...=||-+- -.+.||+--|+-...+|.+|.+++-.
T Consensus 214 ~~~~~~~~~-------~~g~~~~~sG~~~~~rr~al~~vGg~~~----~~i~ED~dl~~rl~~~G~~i~~~p~a 276 (444)
T PRK14583 214 IGLIKRTQR-------VYGQVFTVSGVVAAFRRRALADVGYWSP----DMITEDIDISWKLQLKHWSVFFEPRG 276 (444)
T ss_pred HHHHHHHHH-------HhCCceEecCceeEEEHHHHHHcCCCCC----CcccccHHHHHHHHHcCCeEEEeecc
Confidence 222333221 1333221 22222222244431 14789999999999999999888743
No 8
>PF11457 DUF3021: Protein of unknown function (DUF3021); InterPro: IPR021560 This is a bacterial family of uncharacterised proteins.
Probab=54.48 E-value=1.1e+02 Score=30.88 Aligned_cols=43 Identities=19% Similarity=0.454 Sum_probs=28.7
Q ss_pred HHHHHHHHHHhcchhHHHHHHHHHHhhhHHHHHHHHHHhh-cccch
Q 000813 1194 ASAWKPLMKKLGLWKSVRSIARLYDAGMGMLIFIPIAMFS-WFPFI 1238 (1270)
Q Consensus 1194 a~~~~~~~~~~~~W~~vr~lar~yd~~~G~iif~pia~Ls-w~pf~ 1238 (1270)
+...-..+...+.|...+.. .-+++...+++.|++.+. |+|.-
T Consensus 56 ~~gl~s~if~~e~~s~~~~~--iiHf~~~~~~~~~~~~~~gW~~~~ 99 (136)
T PF11457_consen 56 VFGLASLIFEIERWSLLKQT--IIHFIITYAIFLILAYLLGWFPLS 99 (136)
T ss_pred HHHHHHHHHcccchhHHHHH--HHHHHHHHHHHHHHHHHhCCcchh
Confidence 33333344455778865554 567788888888888875 88874
No 9
>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=49.38 E-value=12 Score=43.50 Aligned_cols=166 Identities=16% Similarity=0.102 Sum_probs=90.8
Q ss_pred HhCcCcEEEEecccccccCCcccceEEEEEeecCCCCccceeEEeecCCCCcCCCCCccCcccchhcccccccccccCC-
Q 000813 590 QRNEALRVAFIDDVETLKDGKVHREFYSKLVKGDINGKDKEIYSIKLPGNPKLGEGKPENQNHAVIFTRGNAIQTIDMN- 668 (1270)
Q Consensus 590 ~~~P~LrVAYide~~~~~~g~~~~~yySvLvk~~~~g~~~eiYRIkLPG~piLGEGKpeNQNhAiIFtRGE~lQtIDmN- 668 (1270)
+.||...|=++|+..+.+.. ..+.+.. .+..+..++--| +.-..||+.++|.|+=..+||++=++|+.
T Consensus 80 ~dyp~~evivv~d~~~d~~~-------~~~~~~~--~~~~~~~~~~~~--~~~~~gK~~al~~~l~~~~~d~V~~~DaD~ 148 (439)
T COG1215 80 QDYPRYEVIVVDDGSTDETY-------EILEELG--AEYGPNFRVIYP--EKKNGGKAGALNNGLKRAKGDVVVILDADT 148 (439)
T ss_pred CCCCCceEEEECCCCChhHH-------HHHHHHH--hhcCcceEEEec--cccCccchHHHHHHHhhcCCCEEEEEcCCC
Confidence 34788888888774321110 0111100 011134444433 56788999999999999999999999985
Q ss_pred --ccchHHHHHhhhhhHHHHhhcCCCCCceeecccceeeccc-chhhccccccchhhHHHhhhHhhcccccccccccCCc
Q 000813 669 --QDNYFEEALKMRNLLEEFHADHGIRPPTILGVREHVFTGS-VSSLAYFMSNQETSFVTLGQRVLANPLKCRMHYGHPD 745 (1270)
Q Consensus 669 --QDnYlEEaLKmRNlL~EF~~~~g~~p~tIlG~REhIFTgs-vssLa~f~a~qE~sFvTl~qR~LA~Pl~vR~HYGHPD 745 (1270)
-.+++.|+.+ .|+..... +++|.+.+..... .+.++..-+... ..-++.+.+-
T Consensus 149 ~~~~d~l~~~~~------~f~~~~~~---~v~~~~~~~~~~~~~~~l~~~~~~~~---------------~~~~~~~~~~ 204 (439)
T COG1215 149 VPEPDALRELVS------PFEDPPVG---AVVGTPRIRNRPDPSNLLGRIQAIEY---------------LSAFYFRLRA 204 (439)
T ss_pred CCChhHHHHHHh------hhcCCCee---EEeCCceeeecCChhhhcchhcchhh---------------hhhHHHhhhh
Confidence 3556655544 56543211 4677665444221 111221111111 1111222221
Q ss_pred ccccccccccCcccccccc-----------cccchhhhhhhhhhcccceeeeeeeE
Q 000813 746 VFDRVFHITRGGISKASRV-----------INISEDIYAGFNTTLRQGNVTHHEYI 790 (1270)
Q Consensus 746 vfd~~F~~TRGGiSKAsk~-----------inLSEDIFaG~N~~lRgG~I~H~EYi 790 (1270)
.-+.-...+.+|.+.|=|. -.+.||.=-++-...+|.++.++.--
T Consensus 205 ~~~~g~~~~~~G~~~~~rr~aL~~~g~~~~~~i~ED~~lt~~l~~~G~~~~~~~~~ 260 (439)
T COG1215 205 ASKGGLISFLSGSSSAFRRSALEEVGGWLEDTITEDADLTLRLHLRGYRVVYVPEA 260 (439)
T ss_pred hhhcCCeEEEcceeeeEEHHHHHHhCCCCCCceeccHHHHHHHHHCCCeEEEeecc
Confidence 1112134455555555442 35779988888888999999988654
No 10
>PF15469 Sec5: Exocyst complex component Sec5
Probab=43.09 E-value=90 Score=33.19 Aligned_cols=65 Identities=17% Similarity=0.266 Sum_probs=48.4
Q ss_pred hhHHHHHHHHHhc---cChHHHHHHhccChhHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHhc
Q 000813 216 KIFYAKDIAVENR---DSQDELWERISRDEYMKYAVEEFYHTLKFILTETLEAEGRMWVERIYDDINVSVEK 284 (1270)
Q Consensus 216 ki~~Ald~a~~~~---~~~~~l~~~i~~d~y~~~Av~e~y~s~k~il~~ll~~~~~~~i~~i~~~i~~~i~~ 284 (1270)
++..|+..-.+++ +-...|.+-|++.+| ..+..-|.-++.++..... +..++..++++||+.+++
T Consensus 72 ~l~~~l~~l~r~~flF~LP~~L~~~i~~~dy--~~~i~dY~kak~l~~~~~~--~~~vf~~v~~eve~ii~~ 139 (182)
T PF15469_consen 72 KLRNALEFLQRNRFLFNLPSNLRECIKKGDY--DQAINDYKKAKSLFEKYKQ--QVPVFQKVWSEVEKIIEE 139 (182)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHcCcH--HHHHHHHHHHHHHHHHhhh--hHHHHHHHHHHHHHHHHH
Confidence 5666777777777 466789999999998 3456778888887765543 555788888888888754
No 11
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose. Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.
Probab=41.80 E-value=20 Score=37.46 Aligned_cols=138 Identities=17% Similarity=0.140 Sum_probs=78.0
Q ss_pred CCCccCcccchhcccccccccccCCccchHHHHHhhhhhHHHHhhcCCCCCceeecccceeecccch-hhccccccchhh
Q 000813 644 EGKPENQNHAVIFTRGNAIQTIDMNQDNYFEEALKMRNLLEEFHADHGIRPPTILGVREHVFTGSVS-SLAYFMSNQETS 722 (1270)
Q Consensus 644 EGKpeNQNhAiIFtRGE~lQtIDmNQDnYlEEaLKmRNlL~EF~~~~g~~p~tIlG~REhIFTgsvs-sLa~f~a~qE~s 722 (1270)
-||.-|-|+|+=..+||++-++|. |.++++. .+.++++.++++ ..+.+++.+-+...++.. .+..-.......
T Consensus 70 ~~~~~~~n~~~~~a~~d~i~~lD~--D~~~~~~-~l~~l~~~~~~~---~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (234)
T cd06421 70 HAKAGNLNNALAHTTGDFVAILDA--DHVPTPD-FLRRTLGYFLDD---PKVALVQTPQFFYNPDPFDWLADGAPNEQEL 143 (234)
T ss_pred CCcHHHHHHHHHhCCCCEEEEEcc--ccCcCcc-HHHHHHHHHhcC---CCeEEEecceEEecCCcchhHHHHHHHHHHH
Confidence 467888999999999999999886 7888653 666777777653 245666655443333221 122222222333
Q ss_pred HHHhhhHhhcccccccccccCCcccccccccccCcccccccccccchhhhhhhhhhcccceeeeeeeEEe
Q 000813 723 FVTLGQRVLANPLKCRMHYGHPDVFDRVFHITRGGISKASRVINISEDIYAGFNTTLRQGNVTHHEYIQV 792 (1270)
Q Consensus 723 FvTl~qR~LA~Pl~vR~HYGHPDvfd~~F~~TRGGiSKAsk~inLSEDIFaG~N~~lRgG~I~H~EYiQc 792 (1270)
|.+..+.. .++.++-.=-|.-=.+.|..+..=||... ..+.||..-+.....+|.+|.+.....|
T Consensus 144 ~~~~~~~~-~~~~~~~~~~g~~~~~r~~~~~~ig~~~~----~~~~eD~~l~~r~~~~g~~i~~~~~~~~ 208 (234)
T cd06421 144 FYGVIQPG-RDRWGAAFCCGSGAVVRREALDEIGGFPT----DSVTEDLATSLRLHAKGWRSVYVPEPLA 208 (234)
T ss_pred HHHHHHHH-HhhcCCceecCceeeEeHHHHHHhCCCCc----cceeccHHHHHHHHHcCceEEEecCccc
Confidence 32221111 00011111113333344444334455542 2467999999999999999887665444
No 12
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis. UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.
Probab=34.59 E-value=30 Score=36.02 Aligned_cols=102 Identities=16% Similarity=0.121 Sum_probs=64.8
Q ss_pred CCCccCcccchhcccccccccccCCccchH-HHHHhhhhhHHHHhhcCCCCCceeecccceeecccchhhccccccchhh
Q 000813 644 EGKPENQNHAVIFTRGNAIQTIDMNQDNYF-EEALKMRNLLEEFHADHGIRPPTILGVREHVFTGSVSSLAYFMSNQETS 722 (1270)
Q Consensus 644 EGKpeNQNhAiIFtRGE~lQtIDmNQDnYl-EEaLKmRNlL~EF~~~~g~~p~tIlG~REhIFTgsvssLa~f~a~qE~s 722 (1270)
.||..|.|+++-..+||++=.+|.. ..+ .++| +.+++.+. + +.+.++|-+
T Consensus 72 ~~~~~~~n~g~~~a~~d~i~~~D~D--~~~~~~~l--~~l~~~~~-~---~~~~~v~~~--------------------- 122 (196)
T cd02520 72 NPKVNNLIKGYEEARYDILVISDSD--ISVPPDYL--RRMVAPLM-D---PGVGLVTCL--------------------- 122 (196)
T ss_pred CHhHHHHHHHHHhCCCCEEEEECCC--ceEChhHH--HHHHHHhh-C---CCCCeEEee---------------------
Confidence 3678889999999999999998874 322 2222 24444543 1 234555543
Q ss_pred HHHhhhHhhcccccccccccCCcccccccccccCcccccccccccchhhhhhhhhhcccceeeeeeeEEe
Q 000813 723 FVTLGQRVLANPLKCRMHYGHPDVFDRVFHITRGGISKASRVINISEDIYAGFNTTLRQGNVTHHEYIQV 792 (1270)
Q Consensus 723 FvTl~qR~LA~Pl~vR~HYGHPDvfd~~F~~TRGGiSKAsk~inLSEDIFaG~N~~lRgG~I~H~EYiQc 792 (1270)
...|+==.+.|-.+-.-||-+. ....+.||..-++...-+|.+|.+++...+
T Consensus 123 ----------------~~~g~~~~~r~~~~~~~ggf~~--~~~~~~eD~~l~~rl~~~G~~i~~~~~~~~ 174 (196)
T cd02520 123 ----------------CAFGKSMALRREVLDAIGGFEA--FADYLAEDYFLGKLIWRLGYRVVLSPYVVM 174 (196)
T ss_pred ----------------cccCceeeeEHHHHHhccChHH--HhHHHHHHHHHHHHHHHcCCeEEEcchhee
Confidence 2233333444544445566632 123468999999999999999998887644
No 13
>PF14518 Haem_oxygenas_2: Iron-containing redox enzyme; PDB: 3BJD_B.
Probab=30.02 E-value=17 Score=34.95 Aligned_cols=75 Identities=25% Similarity=0.506 Sum_probs=44.8
Q ss_pred CCCCCccCcccchhcccccccccccCCcc------chHHHHHhhhhhHHHHhhcCCCCCceeecccceeecccchhhccc
Q 000813 642 LGEGKPENQNHAVIFTRGNAIQTIDMNQD------NYFEEALKMRNLLEEFHADHGIRPPTILGVREHVFTGSVSSLAYF 715 (1270)
Q Consensus 642 LGEGKpeNQNhAiIFtRGE~lQtIDmNQD------nYlEEaLKmRNlL~EF~~~~g~~p~tIlG~REhIFTgsvssLa~f 715 (1270)
.|+|.|++ ||.-+|-| .++.++++.+ .+..|+....|..--+-... ...+.++| +
T Consensus 9 ~G~G~~~~-~H~~Lf~~--~L~~~Gi~~~~~~~~~~~~~~~~~~~n~~~~~~~~~-~~~~~~lG---------------~ 69 (106)
T PF14518_consen 9 MGNGDPER-SHPELFRR--FLRALGIDDEPGAYRDPYPPETLALINLFLALCLHR-SHYPEALG---------------A 69 (106)
T ss_dssp TTTT-GGG--HHHHHHH--HHHHTT-----TT-----HHHHHHHHHHHHHH--H--SSTHHHHH---------------H
T ss_pred hCCCCccc-cHHHHHHH--HHHHcCCCCccccccccCCHHHHHHHHHHHHhcccc-hhHHHHHH---------------H
Confidence 58999884 99999977 8888888876 67789998888776654321 11233333 3
Q ss_pred cccchhhHHHhhhHhhccccc
Q 000813 716 MSNQETSFVTLGQRVLANPLK 736 (1270)
Q Consensus 716 ~a~qE~sFvTl~qR~LA~Pl~ 736 (1270)
+.+-|.+.-...+++..- ++
T Consensus 70 ~~~~E~~~~~~~~~~~~~-l~ 89 (106)
T PF14518_consen 70 LLATESSVPQIYRRLIKG-LR 89 (106)
T ss_dssp HHHHHTHHHHHHHHHHHH-HH
T ss_pred HHHHhhcChHHHHHHHHH-HH
Confidence 447888888887766553 44
No 14
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111. Members of this protein family probable glycosyltransferases of family 2, whose genes are near those for Gram-positive proteins (TIGR03110) related to the proposed exosortase (TIGR02602).
Probab=25.73 E-value=91 Score=37.61 Aligned_cols=41 Identities=24% Similarity=0.485 Sum_probs=32.0
Q ss_pred CCccCcccchhcccccccccccCCccchHHH-HHhhhhhHHHHhhc
Q 000813 645 GKPENQNHAVIFTRGNAIQTIDMNQDNYFEE-ALKMRNLLEEFHAD 689 (1270)
Q Consensus 645 GKpeNQNhAiIFtRGE~lQtIDmNQDnYlEE-aLKmRNlL~EF~~~ 689 (1270)
||+.+-|+|+=.++||+ .+=|++|+.+++ +| +++++.|+++
T Consensus 118 Gka~AlN~gl~~s~g~~--v~~~DaD~~~~~d~L--~~l~~~f~~~ 159 (439)
T TIGR03111 118 GKAKALNAAIYNSIGKY--IIHIDSDGKLHKDAI--KNMVTRFENN 159 (439)
T ss_pred CHHHHHHHHHHHccCCE--EEEECCCCCcChHHH--HHHHHHHHhC
Confidence 79999999999999999 555677888743 44 4778888754
No 15
>PF07304 SRA1: Steroid receptor RNA activator (SRA1); InterPro: IPR009917 This entry consists of several hypothetical mammalian steroid receptor RNA activator proteins. The SRA-RNAs encode stable proteins that are widely expressed and upregulated in breast cancer cell lines. SRA-RNA is a steroid receptor co-activator which acts as a functional RNA. This domain is also found at the C terminus of Sec31, a component of the coat protein complex II (COPII, which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). COPII has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules. ; PDB: 2YRU_A.
Probab=24.03 E-value=5e+02 Score=27.87 Aligned_cols=59 Identities=15% Similarity=0.232 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHHHHhccccchhHHHHH---HHHHHHHHhcccccceeccCCchhHHHHHHHHHHHhhccC
Q 000813 248 VEEFYHTLKFILTETLEAEGRMWVERI---YDDINVSVEKRSIHVDFQLTKLPLVISRVTALMGVLKEAE 314 (1270)
Q Consensus 248 v~e~y~s~k~il~~ll~~~~~~~i~~i---~~~i~~~i~~~~~~~~f~l~~Lp~l~~~~~~L~~~L~~~~ 314 (1270)
+.+.+..+..++...-..-.++.++++ ++.+.+++++|++. ..+.+++.+|.+.|...+
T Consensus 44 i~~~~~~L~~v~~~~~~~~~kr~~~D~~KRL~iLfd~ln~g~Ls--------~~v~~~L~~L~~aL~~~d 105 (157)
T PF07304_consen 44 IEEVLRELQRVLEACPPSIKKRVVDDIEKRLNILFDHLNNGKLS--------KPVVDKLHQLAQALQARD 105 (157)
T ss_dssp HHHHHHHHHHHHHHHHTTS-HHHHHHHHHHHHHHHHHHHHT-S---------HHHHHHHHHHHHHHHHT-
T ss_pred HHHHHHHHHHHHHHcccccchhHHHHHHHHHHHHHHHHhcCCCC--------HHHHHHHHHHHHHHHcCC
Confidence 345555555555544333344433444 66677788888776 348899999999998766
No 16
>PF10569 Thiol-ester_cl: Alpha-macro-globulin thiol-ester bond-forming region; InterPro: IPR019565 This entry contains serum complement C3 and C4 precursors and alpha-macrogrobulins. The alpha-macroglobulin (aM) family of proteins includes protease inhibitors [], typified by the human tetrameric a2-macroglobulin (a2M); they belong to the MEROPS proteinase inhibitor family I39, clan IL. These protease inhibitors share several defining properties, which include (i) the ability to inhibit proteases from all catalytic classes, (ii) the presence of a 'bait region' and a thiol ester, (iii) a similar protease inhibitory mechanism and (iv) the inactivation of the inhibitory capacity by reaction of the thiol ester with small primary amines. aM protease inhibitors inhibit by steric hindrance []. The mechanism involves protease cleavage of the bait region, a segment of the aM that is particularly susceptible to proteolytic cleavage, which initiates a conformational change such that the aM collapses about the protease. In the resulting aM-protease complex, the active site of the protease is sterically shielded, thus substantially decreasing access to protein substrates. Two additional events occur as a consequence of bait region cleavage, namely (i) the h-cysteinyl-g-glutamyl thiol ester becomes highly reactive and (ii) a major conformational change exposes a conserved COOH-terminal receptor binding domain [] (RBD). RBD exposure allows the aM protease complex to bind to clearance receptors and be removed from circulation []. Tetrameric, dimeric, and, more recently, monomeric aM protease inhibitors have been identified [, ]. This short highly conserved region of proteinase-binding alpha-macro-globulins contains the cysteine and a glutamine of a thiol-ester bond that is cleaved at the moment of proteinase binding, and mediates the covalent binding of the alpha-macro-globulin to the proteinase. The GCGEQ motif is highly conserved. ; PDB: 2B39_B 2PN5_A 4ACQ_C 1HZF_A 2WIN_H 2I07_B 2ICF_B 2XWJ_D 3G6J_B 2NOJ_C ....
Probab=24.02 E-value=28 Score=28.11 Aligned_cols=11 Identities=45% Similarity=0.570 Sum_probs=8.2
Q ss_pred cCCcccccchh
Q 000813 811 AGGNGEQVLSR 821 (1270)
Q Consensus 811 a~GnGEQ~LSR 821 (1270)
-.|+|||++|+
T Consensus 9 P~GCgEQtm~~ 19 (31)
T PF10569_consen 9 PYGCGEQTMSS 19 (31)
T ss_dssp --SSTTHHHHH
T ss_pred CCCcHHHHHHH
Confidence 46999999987
No 17
>COG4176 ProW ABC-type proline/glycine betaine transport system, permease component [Amino acid transport and metabolism]
Probab=21.65 E-value=5.6e+02 Score=30.36 Aligned_cols=67 Identities=24% Similarity=0.499 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcchh-HHHHHHHHH-HhhhHHHHHHHHHHhhcc---------cchhhhHh
Q 000813 1177 FACILAFVPTGWGILCIASAWKPLMKKLGLWK-SVRSIARLY-DAGMGMLIFIPIAMFSWF---------PFISTFQT 1243 (1270)
Q Consensus 1177 f~~~lA~i~~g~~il~ia~~~~~~~~~~~~W~-~vr~lar~y-d~~~G~iif~pia~Lsw~---------pf~~~~QT 1243 (1270)
..+.+|+...+|++.......--++..+|.|+ +.++||-.. -.++.+++=+|+-++++- |...-+||
T Consensus 61 i~~~la~~~~~~~~~i~t~~~l~~I~~~GlW~~tM~TLaLVl~a~~isivIGiPlGI~~ar~~~~~~i~~PiLDlMQT 138 (290)
T COG4176 61 IVALLAWFASGLGLAIFTLLGLLLIGNLGLWDQTMQTLALVLTATLISIVIGIPLGIWAARSPRVYRIVRPILDLMQT 138 (290)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHcchHHHHHhccHHHHHHHhHHHHHHhc
Confidence 44555555556665544443334567789998 567777643 455677777888888763 66777777
No 18
>PLN02436 cellulose synthase A
Probab=20.21 E-value=7.6e+02 Score=34.12 Aligned_cols=225 Identities=18% Similarity=0.173 Sum_probs=113.0
Q ss_pred cchhhhhhhhhhcccceeeee-eeE--EeccccccCcccccceeeeccCCcccccchhhhhh---cccccchhhhhhhhc
Q 000813 767 ISEDIYAGFNTTLRQGNVTHH-EYI--QVGKGRDVGLNQIAVFEGKVAGGNGEQVLSRDVYR---LGQLFDFFRMMSFYF 840 (1270)
Q Consensus 767 LSEDIFaG~N~~lRgG~I~H~-EYi--QcGKGRDvG~~qI~~FeaKIa~GnGEQ~LSRdvyr---LG~~ldffRmLSfYy 840 (1270)
++||++.|+---.||=+--+| +=. -.|---+ ++.+-..=-..=|.|+=|-.+||+-=- .+.+|.|-.-|++.
T Consensus 792 vTEDv~TG~rLH~rGWrSvY~~P~r~AF~GlAP~-~L~d~L~Qr~RWA~G~lQIffsr~nPl~~g~~~~L~l~QRL~Yl- 869 (1094)
T PLN02436 792 VTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPI-NLSDRLHQVLRWALGSVEIFLSRHCPIWYGYGGGLKWLERFSYI- 869 (1094)
T ss_pred eecHHHHHHHHHcCCCceEeCCCCchhhcCcCCC-CHHHHHHHHHHHhhcceeeeeccCCcchhcccccCCHHHHHHHH-
Confidence 689999999999999887776 311 1232111 111112223456788888889986322 35678887666544
Q ss_pred cccchhhhHHHHHHHHHHHHHHHHHHHhcCCcceeeecccccCCchhhhhccchhhhHHHHHHhhhHHHHHHHHHH----
Q 000813 841 TTVGYYFCTMLTVLTVYAFLYGKTYLALSGVGEELQVRAQVTENTALTAALNTQFLFQIGIFTAVPMVLGFILEQG---- 916 (1270)
Q Consensus 841 t~~GFy~n~~~~vltVy~fly~~lyLalsg~~~~~~~~~~~~~~~~l~~~l~~q~i~qlg~l~~lPm~~~~~lE~G---- 916 (1270)
.+.=++++++.. .+| +..=++.-+.|+. +- +-+ +...+-+.+..+++..+...+|--
T Consensus 870 ~~~ly~l~Slp~--liY--~~lP~l~LL~G~~--i~------------P~v-s~~~~~~fi~lfls~~~~~lLE~~wsG~ 930 (1094)
T PLN02436 870 NSVVYPWTSIPL--IVY--CTLPAICLLTGKF--IV------------PEI-SNYASILFMALFISIAATGILEMQWGGV 930 (1094)
T ss_pred HHHHHHHHHHHH--HHH--HHHHHHHHHcCCe--ec------------Ccc-chHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 444456666544 222 2333333355521 11 000 011223344566777777777741
Q ss_pred HHHHHHHHHHHHhh----hcceeEEEEeceeeeeecccccccCeeeeccCCceeEee-----cchhhhhhhhhhhhHHHH
Q 000813 917 FLAAVVNFITMQLQ----LCSVFFTFSLGTRTHYFGRTILHGGARYQATGRGFVVRH-----IKFSENYRLYSRSHFVKG 987 (1270)
Q Consensus 917 ~~~A~~~~~~~~l~----l~~vFf~F~~gt~~hy~~~~il~GGAkY~aTGRGFvi~h-----~~F~~lY~~Ya~Shf~~g 987 (1270)
=+++.++= .|+. .++-+|-| +++ +.. +.|| ..-+|.|+. ..|+++|..=..+-+...
T Consensus 931 si~~WWrn--Qq~w~I~~tSa~Lfav-l~~----iLK--vLgg-----s~~~F~VTsK~~d~~~~a~ly~f~~S~L~iP~ 996 (1094)
T PLN02436 931 GIDDWWRN--EQFWVIGGVSSHLFAL-FQG----LLK--VLAG-----VNTNFTVTSKAADDGEFSELYLFKWTSLLIPP 996 (1094)
T ss_pred cHHHhhhh--hhHHHHHHHHHHHHHH-HHH----HHH--Hhcc-----CcccceecccccccccccceeeecceeHhHHH
Confidence 12222221 1111 12212211 000 000 1111 123455554 347788854467788888
Q ss_pred HHHHHHHHHHHHhcccC-------CcchhHHHHHHHHHHHHHHHhh
Q 000813 988 LEVVLLLIVYIAYGYNE-------GGTLGYILLSISSWFMALSWLF 1026 (1270)
Q Consensus 988 ~el~llLi~y~~yg~~~-------~~~~~y~~~t~s~W~~~~s~l~ 1026 (1270)
.-++++-++-.+.|... ....+..-+.+++|+++..|=|
T Consensus 997 tti~ilNlvaiv~Gi~~~i~~g~~~~g~l~~~l~~~~wvvv~lyPf 1042 (1094)
T PLN02436 997 TTLLIINIIGVIVGVSDAINNGYDSWGPLFGRLFFALWVIVHLYPF 1042 (1094)
T ss_pred HHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHHH
Confidence 88887776544444221 0112233566788888776644
No 19
>PF04156 IncA: IncA protein; InterPro: IPR007285 Chlamydia trachomatis is an obligate intracellular bacterium that develops within a parasitophorous vacuole termed an inclusion. The inclusion is nonfusogenic with lysosomes but intercepts lipids from a host cell exocytic pathway. Initiation of chlamydial development is concurrent with modification of the inclusion membrane by a set of C. trachomatis-encoded proteins collectively designated Incs. One of these Incs, IncA (Inclusion membrane protein A), is functionally associated with the homotypic fusion of inclusions [].
Probab=20.09 E-value=3.3e+02 Score=29.05 Aligned_cols=22 Identities=14% Similarity=0.016 Sum_probs=8.8
Q ss_pred HHHHHHHHHHHHHHHHHhhhcC
Q 000813 1149 FIQGLSLLVALAGLSVAVAITK 1170 (1270)
Q Consensus 1149 l~~~~l~~~~v~~~~~~~~~~~ 1170 (1270)
++.+++.++++++.+++++++.
T Consensus 9 i~~iilgilli~~gI~~Lv~~~ 30 (191)
T PF04156_consen 9 IILIILGILLIASGIAALVLFI 30 (191)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3333444444443343444443
Done!