BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 000814
(1269 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224061865|ref|XP_002300637.1| predicted protein [Populus trichocarpa]
gi|222842363|gb|EEE79910.1| predicted protein [Populus trichocarpa]
Length = 1183
Score = 1398 bits (3618), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 734/1253 (58%), Positives = 872/1253 (69%), Gaps = 150/1253 (11%)
Query: 6 NPNPNYRKPLNAYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGT 65
NP+P +YH+GGIQVEFPY+PYG+QL FM RVISTLDRAQRDGHCHALLESPTGT
Sbjct: 11 NPDPK-----KSYHIGGIQVEFPYKPYGTQLAFMGRVISTLDRAQRDGHCHALLESPTGT 65
Query: 66 GKSLSLLCSTLAWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTN 125
GKSLSLLCSTLAWQQN KLKNQ AN++HS P+ EA+TDPLA+GGGF+PES PS+ P+
Sbjct: 66 GKSLSLLCSTLAWQQNYKLKNQYANLTHSTPNPEAITDPLAHGGGFVPESTPSSTEPTAA 125
Query: 126 GQTAQVAMNNKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNK 185
+ AQ +NK KKK P I+YASRTHSQISQV+SE++KT YRVPMAVLASRKHYCTN
Sbjct: 126 VELAQKVASNK--KKKAVPKIYYASRTHSQISQVVSEFRKTTYRVPMAVLASRKHYCTNV 183
Query: 186 YVRDKENIDEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVR 245
+V KENIDEECKLLL D+ GC QFKN +KVRGHPSLQKGGCHEVHDIEDLV VGQVV+
Sbjct: 184 HVNRKENIDEECKLLLKDKEAGCLQFKNANKVRGHPSLQKGGCHEVHDIEDLVKVGQVVK 243
Query: 246 GCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSV 305
GCSYYAARSMADDAQLVFCPY+YIINPVIRGAMEVDI GAIL+LDEAHNIEDIARDAGSV
Sbjct: 244 GCSYYAARSMADDAQLVFCPYNYIINPVIRGAMEVDIIGAILVLDEAHNIEDIARDAGSV 303
Query: 306 DIDEDVLLKLQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTG 365
D++EDVL KLQ EL+++C V+PMIYQPL EM QDL+ WIERRK L KREFQH+ SCW G
Sbjct: 304 DVEEDVLQKLQTELQELCPVDPMIYQPLYEMAQDLLSWIERRKNKLEKREFQHYCSCWAG 363
Query: 366 DKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVITLEGLFSSLTYFF 425
DKALRE QEANIS+QCFPILL+CA +AIK ATDTE+E HLSGMSV+ LEGLFSSLTYFF
Sbjct: 364 DKALREFQEANISQQCFPILLDCAKQAIKAATDTEAEGSHLSGMSVVLLEGLFSSLTYFF 423
Query: 426 SRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGT 485
SRNG VSD+QLAL++Y+KRD K G+WT TLSLWCLNPAVVFKD+A+LSLS+ILTSGT
Sbjct: 424 SRNGCQVSDFQLALRRYVKRDGKK-AGDWTCTLSLWCLNPAVVFKDIADLSLSVILTSGT 482
Query: 486 LSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTAD------- 538
LSPMNSFSSELGVQFGTCLEAPHV+DV+ QV SVIST PDNYPLNASYKTAD
Sbjct: 483 LSPMNSFSSELGVQFGTCLEAPHVVDVESQVCVSVISTSPDNYPLNASYKTADCYTFQDA 542
Query: 539 ---------------------GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDF 577
YKLMEKL NRWRETGQWSRLNA+KPLFVEP+GGSQEDF
Sbjct: 543 LGKSLEEICKIVPAGSLVFFPSYKLMEKLSNRWRETGQWSRLNARKPLFVEPRGGSQEDF 602
Query: 578 EIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVG 637
+ +LK YY+ I + + A+ RK++VK+ N L+ ES +N+ K GA+FLAVCRGK+ G
Sbjct: 603 DSILKGYYDCIRRDKRPALGRKRKVKKVDANHLDGTESTDNSEKGGAAFLAVCRGKVSEG 662
Query: 638 IPFPNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAII 697
I F + +KKYND Y++SKNLL GNEWYC QAFRALNQA+GRCIRH+FDYG+II
Sbjct: 663 IDFSDD-----YARKKYNDAYKTSKNLLGGNEWYCQQAFRALNQAVGRCIRHKFDYGSII 717
Query: 698 LLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFRDVKGWVGKKMFNGLENSD- 756
LLDER++EERNR +ISKWLRKSI+Q+++FD SLE L+SFFR+ K VGK M L NSD
Sbjct: 718 LLDERYKEERNRVYISKWLRKSIQQHNNFDMSLEVLRSFFRNAKEKVGKNMEEFLLNSDT 777
Query: 757 NDVDHVSSMDQCKEVTKQNTQELNKSDHSGQNVQSISKYD-PFSHQKSQGNFEVQTSLQT 815
N ++ MDQ T+ +Q+L+ SD G+ + S++K + S KSQ + EVQ S Q
Sbjct: 778 NKEKNIPRMDQIVGHTRNKSQKLSNSDQYGEKIVSLTKCEGAVSKLKSQDDVEVQASFQI 837
Query: 816 DQN-NSCIEYIDLERMNDKNNHSIDSSKGSTRKENKKLNSYDNSGQKLHSSVKYDSFPGL 874
D S E IDLE DS GS E + P +
Sbjct: 838 DDELESSQEIIDLE---------CDSHIGSRCSE-----------------ASFHEDPEI 871
Query: 875 NLLDEVEVQEFVQLDRVSSCKDYINTQCSLQKSSRCCEASSMPFSNEDPELLLVKETPAM 934
L+ E C A+S F ++D
Sbjct: 872 TLVKETP------------------------GMGECGAAASPGFFSKD----------GN 897
Query: 935 DDNNTMASPGSLSKDGNSSSTIFQASTQSPDQLSVHSQSLTNPVRVPSSAQPEMVVTPEK 994
+ M +P L+ G S + +PD+ +Q M+VTPEK
Sbjct: 898 SSSTMMQAPNELADQGLVSLVSVTNQSAAPDK-----------------SQCSMLVTPEK 940
Query: 995 EVTGDTSNLPPERDSSLSSSVNSHTQKRRKTMVSPSVDLM-------------------- 1034
E+T T NL PE +SSL+ SVNSHTQKRRK+M ++L
Sbjct: 941 ELTITTCNLRPEVESSLNLSVNSHTQKRRKSMDLSLINLQGEQSDTSYAETPGCVSFTRS 1000
Query: 1035 LMASREANRRIEFNSETNYVKNKSKTS------NNCAESHLSSTPVMDKTLQISCSLCRS 1088
+ S + NRRIEF ETN + +S N+C S SS +MDK LQISCSLC+S
Sbjct: 1001 SVTSGDTNRRIEFGLETNCRERQSTKHASPLLPNSCGTSCASSDSLMDKRLQISCSLCKS 1060
Query: 1089 PLGLPENHLYVRCSVTSSAKAHLVSLLKQRQELCA--NVTSIPVIMTDISSVDQLLTNQS 1146
PLG PEN+LYV CS+TSS+K HL SL+K+R E CA T +PV++TDISSVDQ L N +
Sbjct: 1061 PLGRPENNLYVECSLTSSSKVHLASLVKERMERCAKNKSTCVPVLVTDISSVDQRLCNIA 1120
Query: 1147 FGGASGQGIWCEEDGCVYNTLFCPFCSSPSNCLGVQIVASNALNFQLLNKILF 1199
A +G+W EEDGCV+N++FCPFCS SNCLGV+I+A++A N QLLNK+ F
Sbjct: 1121 LQDAQQKGVWSEEDGCVFNSVFCPFCSM-SNCLGVKIMATDASNVQLLNKVGF 1172
>gi|359491914|ref|XP_002272718.2| PREDICTED: Fanconi anemia group J protein-like [Vitis vinifera]
Length = 1255
Score = 1384 bits (3583), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 741/1330 (55%), Positives = 910/1330 (68%), Gaps = 160/1330 (12%)
Query: 2 VSEANPNPNYRKPLNAYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLES 61
+ A P N P N YH+GGI VEFPYQPYGSQL FM RVISTLDRAQRDGHCHALLES
Sbjct: 1 MGSATPATN---PKNVYHIGGIAVEFPYQPYGSQLAFMGRVISTLDRAQRDGHCHALLES 57
Query: 62 PTGTGKSLSLLCSTLAWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIP 121
PTGTGKSLSLLCS LAWQ+N + KN ++S+SKPD EA++DPL +GGGF+PE++PS+IP
Sbjct: 58 PTGTGKSLSLLCSALAWQKNYRPKNMNGDVSNSKPDPEALSDPLGHGGGFVPETEPSSIP 117
Query: 122 PSTNGQTAQVAMNNKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHY 181
N + A A N KN KKK PTIFYASRTH+QISQVI EY+KTAYRVPMAVLASRKHY
Sbjct: 118 APENSEPASAA-NGKNKKKKRKPTIFYASRTHTQISQVIREYRKTAYRVPMAVLASRKHY 176
Query: 182 CTNKYVRDKENIDEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVG 241
CTN+ + K NIDEECKLL+ D++ GCP+FKN+HKV+GHPSLQKGGCHE HDIEDLV VG
Sbjct: 177 CTNRKINAKANIDEECKLLVRDQDFGCPEFKNMHKVKGHPSLQKGGCHEAHDIEDLVKVG 236
Query: 242 QVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARD 301
QVV+GC+YYAAR MAD+AQLVFCPYSYIINPVIRGAME+DI+GAILILDEAHNIED+ARD
Sbjct: 237 QVVKGCAYYAARDMADNAQLVFCPYSYIINPVIRGAMELDIEGAILILDEAHNIEDMARD 296
Query: 302 AGSVDIDEDVLLKLQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFS 361
AGSVD++EDVL KLQ EL Q+C + MIYQPL EMTQD++ WI+R+K TL KREFQH+FS
Sbjct: 297 AGSVDVEEDVLHKLQTELGQLCPADAMIYQPLYEMTQDIISWIDRKKNTLEKREFQHYFS 356
Query: 362 CWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVITLEGLFSSL 421
CWTGDKALRELQEANIS+Q FPIL ECA KAIK A D ES + HLSGMSVITLEGL+S+L
Sbjct: 357 CWTGDKALRELQEANISQQSFPILQECARKAIKAAIDIESRVAHLSGMSVITLEGLYSAL 416
Query: 422 TYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIIL 481
+YFFS NG H DYQLALQ+Y+K+D+ + G+WT T SLWCLNPAVVF+ +A+LSLS+IL
Sbjct: 417 SYFFSENGLHTVDYQLALQRYVKKDAGSVAGSWTCTFSLWCLNPAVVFRGIADLSLSVIL 476
Query: 482 TSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTADGY- 540
TSGTLSPM+SFSSELGVQFGTCLEAPHVID++ Q+ ++ ST P NYPLNASYKTAD Y
Sbjct: 477 TSGTLSPMHSFSSELGVQFGTCLEAPHVIDIESQLWAAIFSTSPGNYPLNASYKTADAYA 536
Query: 541 ---------------------------KLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGS 573
KLMEKLC+RWRETGQWS+LN +K LF+EP+GGS
Sbjct: 537 FQDALGKSLEEIFKIVPGGTLVFFPSYKLMEKLCSRWRETGQWSQLNEQKFLFIEPRGGS 596
Query: 574 QEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGK 633
Q+DFE +LK YY S+ +G+K + RK+R K+ + + ESQ+N+ KKGA+FLAV RGK
Sbjct: 597 QDDFEPILKAYYESVRRGTKPTLGRKRRTKKMDLSQSDEKESQDNSKKKGAAFLAVFRGK 656
Query: 634 ---------------IVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRA 678
I+VGIPFPN++DIQV+ KKKYND Y+SSK+LLSGNEWYC+QAFRA
Sbjct: 657 VSEGIDFSDENARAVIIVGIPFPNVHDIQVAQKKKYNDMYKSSKDLLSGNEWYCHQAFRA 716
Query: 679 LNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
LNQA GRCIRHRFDYG IILLDERF+E+RN A+ISKWLRKSIKQY+SFD SLE LKSFF
Sbjct: 717 LNQAAGRCIRHRFDYGGIILLDERFREDRNTAYISKWLRKSIKQYESFDMSLERLKSFFI 776
Query: 739 DVKGWVGKKMFNGLENSDNDVDHVSSMDQCKEVTKQNTQELNKSDHSGQNVQSISKYDPF 798
D K VG K N L++++ +V + SMDQ T++ Q+L K DH
Sbjct: 777 DAKEQVGDKAVNVLQSAETNVQEILSMDQIIGSTRKKNQKLKKPDHGV------------ 824
Query: 799 SHQKSQGNFEVQTSLQTDQNNSCIEYIDLERMNDKNNHSIDSSKGSTRKENKKLNSYDNS 858
QK + F +SC EYIDLE K++ ++ ++ + ++
Sbjct: 825 --QKDEEGF-----------SSCKEYIDLECSPQKDSRCSKATSPASSHDGPEV------ 865
Query: 859 GQKLHSSVKYDSFPGLNLLDEVEVQEFVQLDRVSSCKDYINTQCSLQKSSRCCEAS---S 915
S VK PG++ Q VS KD ++ +Q S+ + S S
Sbjct: 866 -----SIVK--ETPGVD-------GNITQTSPVSFSKDENSSSTIIQASTDLPDQSLFHS 911
Query: 916 MPFSNEDPELLLVKETPAMDDNNTMASPGSLSKDGNSSSTIFQASTQSPDQLSV--HSQS 973
M ++N P+ + + +P +D ++++ T+SP LSV H+Q
Sbjct: 912 MSYTNS-------SGPPSRAMCSLLVTP---ERDFIANTSNMMPETESPLNLSVNSHAQK 961
Query: 974 LTNPVRVPS--SAQPEMVVTPEKEVTGDTSNLPPERDSSLSSSVNSHTQKRRKTMVSPSV 1031
+ +PS Q E P+ + G N
Sbjct: 962 RRKSMILPSVNPTQAEHSDAPDAKTPGHIGN----------------------------- 992
Query: 1032 DLMLMASREANRRIEFNSETNYVKNKSK--------TSNNCAESHLSSTPVMDKTLQISC 1083
MA+R+ANRRIEF + + ++K K T N+C S +SS MDK LQI C
Sbjct: 993 ---SMATRDANRRIEFGFGSKFSEDKLKKSNIRQLLTMNHCDASSVSSCCSMDKQLQIFC 1049
Query: 1084 SLCRSPLGLPENHLYVRCSVTSSAKAHLVSLLKQRQE-LCANV-TSIPVIMTDISSVDQL 1141
SLCR+PLGLPEN LYV CS+TSS+K HL SLL+ E L N TSIPV+++D SSV+Q
Sbjct: 1050 SLCRNPLGLPENDLYVMCSLTSSSKVHLASLLRGSLESLAVNTSTSIPVVVSDSSSVNQR 1109
Query: 1142 LTNQSFGGASGQGIWCEEDGCVYNTLFCPFCSSPSNCLGVQIVASNALNFQLLNKILFYL 1201
L N++ GGA G+WCEEDGCV+NT++CPFCS+P+NCLGVQI+A+NA N LLNKILFY
Sbjct: 1110 LCNKTLGGAQEHGVWCEEDGCVFNTIYCPFCSTPNNCLGVQIMATNASNVDLLNKILFYF 1169
Query: 1202 DRLEIRIPESGKFK-------SEAKDSSPITHSAMDKVAAFSCIEKFSY--SPILEDSGG 1252
DRLEI+ PE+ K SE KD SP + S D+V+ EKFSY ++S G
Sbjct: 1170 DRLEIKNPEASTDKGIKNPESSEDKDLSPPSGSNSDEVSELDPFEKFSYKHQEPQQNSNG 1229
Query: 1253 WRSTKSKLRL 1262
WR+TKSK R+
Sbjct: 1230 WRTTKSKNRI 1239
>gi|297745566|emb|CBI40731.3| unnamed protein product [Vitis vinifera]
Length = 1218
Score = 1263 bits (3269), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 702/1335 (52%), Positives = 860/1335 (64%), Gaps = 207/1335 (15%)
Query: 2 VSEANPNPNYRKPLNAYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLES 61
+ A P N P N YH+GGI VEFPYQPYGSQL FM RVISTLDRAQRDGHCHALLES
Sbjct: 1 MGSATPATN---PKNVYHIGGIAVEFPYQPYGSQLAFMGRVISTLDRAQRDGHCHALLES 57
Query: 62 PTGTGKSLSLLCSTLAWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIP 121
PTGTGKSLSLLCS LAWQ+N + KN ++S+SKPD EA++DPL +GGGF+PE++PST
Sbjct: 58 PTGTGKSLSLLCSALAWQKNYRPKNMNGDVSNSKPDPEALSDPLGHGGGFVPETEPST-- 115
Query: 122 PSTNGQTAQVAMNNKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHY 181
N + A A N KN KKK PTIFYASRTH+QISQVI EY+KTAYRVPMAVLASRKHY
Sbjct: 116 -PENSEPASAA-NGKNKKKKRKPTIFYASRTHTQISQVIREYRKTAYRVPMAVLASRKHY 173
Query: 182 CTNKYVRDKENIDEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVG 241
CTN+ + K NIDEECKLL+ D++ GCP+FKN+HKV+GHPSLQKGGCHE HDIEDLV VG
Sbjct: 174 CTNRKINAKANIDEECKLLVRDQDFGCPEFKNMHKVKGHPSLQKGGCHEAHDIEDLVKVG 233
Query: 242 QVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAH-------- 293
QVV+GC+YYAAR MAD+AQLVFCPYSYIINPVIRGAME+DI+GAILILDEAH
Sbjct: 234 QVVKGCAYYAARDMADNAQLVFCPYSYIINPVIRGAMELDIEGAILILDEAHSVFVLYMT 293
Query: 294 ----------NIEDIARDAGSVDIDEDVLLKLQMELEQVCSVNPMIYQPLIEMTQDLVGW 343
NIED+ARDAGSVD++EDVL KLQ EL Q+C + MIYQPL EMTQD++ W
Sbjct: 294 SPIMSETITFNIEDMARDAGSVDVEEDVLHKLQTELGQLCPADAMIYQPLYEMTQDIISW 353
Query: 344 IERRKATLAKREFQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESEL 403
I+R+K TL KREFQH+FSCWTGDKALRELQEANIS+Q FPIL ECA KAIK A D ES +
Sbjct: 354 IDRKKNTLEKREFQHYFSCWTGDKALRELQEANISQQSFPILQECARKAIKAAIDIESRV 413
Query: 404 PHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGG----------- 452
HLSGMSVITLEGL+S+L+YFFS NG H DYQLALQ+Y+K+D+ +
Sbjct: 414 AHLSGMSVITLEGLYSALSYFFSENGLHTVDYQLALQRYVKKDAGHHLSVRLHLIKLMLV 473
Query: 453 ----NWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPH 508
NWT T SLWCLNPAVVF+ +A+LSLS+ILTSGTLSPM+SFSSELGVQFGTCLEAPH
Sbjct: 474 EFIQNWTCTFSLWCLNPAVVFRGIADLSLSVILTSGTLSPMHSFSSELGVQFGTCLEAPH 533
Query: 509 VIDVDLQVLTSVISTGPDNYPLNASYKTADGYKLMEKLCNRWRET-----GQWSRLNAKK 563
VID++ Q+ ++ ST P NYPLNASYKTAD Y + L E GQWS+LN +K
Sbjct: 534 VIDIESQLWAAIFSTSPGNYPLNASYKTADAYAFQDALGKSLEEIFKIVPGQWSQLNEQK 593
Query: 564 PLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKG 623
LF+EP+GGSQ+DFE +LK YY S SQ+N+ KKG
Sbjct: 594 FLFIEPRGGSQDDFEPILKAYYES---------------------------SQDNSKKKG 626
Query: 624 ASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSGN 668
A+FLAV RGK I+VGIPFPN++DIQV+ KKKYND Y+SSK+LLSGN
Sbjct: 627 AAFLAVFRGKVSEGIDFSDENARAVIIVGIPFPNVHDIQVAQKKKYNDMYKSSKDLLSGN 686
Query: 669 EWYCNQAFRALNQAIGRCIRHRFDYGAIILL-DERFQEERNRAHISKWLRKSIKQYDSFD 727
EWYC+QAFRALNQA GRCIRHRFDYG IILL DERF+E+RN A+ISKWLRKSIKQY+SFD
Sbjct: 687 EWYCHQAFRALNQAAGRCIRHRFDYGGIILLADERFREDRNTAYISKWLRKSIKQYESFD 746
Query: 728 ASLEGLKSFFRDVKGWVGKKMFNGLENSDNDVDHVSSMDQCKEVTKQNTQELNKSDHSGQ 787
SLE LKSFF D K VG K N L++++ +V + SMDQ T++ Q+L K DH Q
Sbjct: 747 MSLERLKSFFIDAKEQVGDKAVNVLQSAETNVQEILSMDQIIGSTRKKNQKLKKPDHGVQ 806
Query: 788 NVQSISKYDPFSHQKSQGNFEVQTSLQTDQN--NSCIEYIDLERMNDKNNHSIDSSKGST 845
V S N Q + D+ +SC EYIDLE K++ ++ ++
Sbjct: 807 KVVS-------------NNTRFQKLVLKDEEGFSSCKEYIDLECSPQKDSRCSKATSPAS 853
Query: 846 RKENKKLNSYDNSGQKLHSSVKYDSFPGLNLLDEVEVQEFVQLDRVSSCKDYINTQCSLQ 905
+ +++ + PG++ Q VS KD ++ +Q
Sbjct: 854 SHDGPEVSIVKET-------------PGVD-------GNITQTSPVSFSKDENSSSTIIQ 893
Query: 906 KSSRCCEAS---SMPFSNEDPELLLVKETPAMDDNNTMASPGSLSKDGNSSSTIFQASTQ 962
S+ + S SM ++N P+ + + +P +D ++++ T+
Sbjct: 894 ASTDLPDQSLFHSMSYTNS-------SGPPSRAMCSLLVTP---ERDFIANTSNMMPETE 943
Query: 963 SPDQLSV--HSQSLTNPVRVPS--SAQPEMVVTPEKEVTGDTSNLPPERDSSLSSSVNSH 1018
SP LSV H+Q + +PS Q E P+ + G N
Sbjct: 944 SPLNLSVNSHAQKRRKSMILPSVNPTQAEHSDAPDAKTPGHIGN---------------- 987
Query: 1019 TQKRRKTMVSPSVDLMLMASREANRRIEFNSETNYVKNKSKTSNNCAESHLSSTPVMDKT 1078
MA+R+ANRRIEF MDK
Sbjct: 988 ----------------SMATRDANRRIEFGFG------------------------MDKQ 1007
Query: 1079 LQISCSLCRSPLGLPENHLYVRCSVTSSAKAHLVSLLKQRQE-LCANV-TSIPVIMTDIS 1136
LQI CSLCR+PLGLPEN LYV CS+TSS+K HL SLL+ E L N TSIPV+++D S
Sbjct: 1008 LQIFCSLCRNPLGLPENDLYVMCSLTSSSKVHLASLLRGSLESLAVNTSTSIPVVVSDSS 1067
Query: 1137 SVDQLLTNQSFGGASGQGIWCEEDGCVYNTLFCPFCSSPSNCLGVQIVASNALNFQLLNK 1196
SV+Q L N++ GGA G+WCEEDGCV+NT++CPFCS+P+NCLGVQI+A+NA N LLNK
Sbjct: 1068 SVNQRLCNKTLGGAQEHGVWCEEDGCVFNTIYCPFCSTPNNCLGVQIMATNASNVDLLNK 1127
Query: 1197 ILFYLDRLEIRIPESGKFKSEAK-------DSSPITHSAMDKVAAFSCIEKFSY--SPIL 1247
+ D L + + + K D SP + S D+V+ EKFSY
Sbjct: 1128 VWLSCDLLVLGNYPAKSYDDYFKFLLAYLQDLSPPSGSNSDEVSELDPFEKFSYKHQEPQ 1187
Query: 1248 EDSGGWRSTKSKLRL 1262
++S GWR+TKSK+
Sbjct: 1188 QNSNGWRTTKSKVEF 1202
>gi|449519583|ref|XP_004166814.1| PREDICTED: Fanconi anemia group J protein homolog [Cucumis sativus]
Length = 1239
Score = 1262 bits (3265), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 705/1321 (53%), Positives = 877/1321 (66%), Gaps = 152/1321 (11%)
Query: 4 EANPNPNYRKPLNAYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPT 63
++ PNP Y+ N Y +GGIQVEFP++PYGSQL FM RVISTLDRAQR+GHCHALLESPT
Sbjct: 11 KSKPNPTYQLTKNVYPIGGIQVEFPFRPYGSQLAFMGRVISTLDRAQREGHCHALLESPT 70
Query: 64 GTGKSLSLLCSTLAWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQ-PSTI-- 120
GTGKSLSLLCS+LAWQ+N K+KN AN H+K EA TDPL GGGFIPE Q PS
Sbjct: 71 GTGKSLSLLCSSLAWQKNYKIKNPDANPCHTKAAPEAATDPLGFGGGFIPEVQTPSKFAC 130
Query: 121 --PPSTNGQTAQVAMNNKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASR 178
P N A++ + KK PTI+YASRTHSQISQVI EY+KTAYRVPMAVLASR
Sbjct: 131 LYPDYPNISNARIQL------KKTAPTIYYASRTHSQISQVIREYRKTAYRVPMAVLASR 184
Query: 179 KHYCTNKYVRDKENIDEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLV 238
KH CTN YVR K+N+DEECKLLL D+ GC +FKN +KV+ HP+LQKGGCHEVHDIEDLV
Sbjct: 185 KHLCTNPYVRGKDNLDEECKLLLKDQIAGCSEFKNANKVKCHPTLQKGGCHEVHDIEDLV 244
Query: 239 NVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDI 298
VG+ V+GCSYYAARSMADDAQLVFCPYSYIINPVIRGAM+VDIKGAI+I DEAHNIEDI
Sbjct: 245 KVGEAVKGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMDVDIKGAIVIFDEAHNIEDI 304
Query: 299 ARDAGSVDIDEDVLLKLQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQH 358
AR GSVDI+ED L KLQMELE +C ++ ++YQPL EMTQDL WI++RK TL KREFQH
Sbjct: 305 ARHGGSVDIEEDTLNKLQMELEDLCPIDSLVYQPLYEMTQDLTSWIDQRKTTLQKREFQH 364
Query: 359 FFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVITLEGLF 418
+ +CWTG+ A RELQEANI++QCFPILLECATKAIK A+DTES+ HLSG+SVITLEGLF
Sbjct: 365 YVTCWTGNHAQRELQEANITQQCFPILLECATKAIKAASDTESDDAHLSGLSVITLEGLF 424
Query: 419 SSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLS 478
SSLTYFFSRNG H+SDYQLALQ+YIKRD WT TLSLWCLNPAVVF+D+++LSLS
Sbjct: 425 SSLTYFFSRNGCHMSDYQLALQRYIKRDPGKAYAEWTVTLSLWCLNPAVVFRDISDLSLS 484
Query: 479 IILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTAD 538
+ILTSGTLSPMNSFSSELGVQFGT LEAPHVIDV+ QV +VISTGP NYPLN SYKTAD
Sbjct: 485 VILTSGTLSPMNSFSSELGVQFGTSLEAPHVIDVESQVWPAVISTGPGNYPLNGSYKTAD 544
Query: 539 G----------------------------YKLMEKLCNRWRETGQWSRLNAKKPLFVEPK 570
G YKLMEKL NRW ETGQWSRLNA+K LFVEP+
Sbjct: 545 GYAFQDALGKSLEEIFFIAPGGCLVFFPSYKLMEKLQNRWSETGQWSRLNARKSLFVEPR 604
Query: 571 GGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVC 630
GG+QEDF+ +LK YY++I G A+ +K R K+ ND + + EN K+GA+ LAV
Sbjct: 605 GGAQEDFDSILKGYYDTIRLGDNFAIGKKSRGKKVKPND-SYVVGCENP-KEGAALLAVF 662
Query: 631 RGK---------------IVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQA 675
RGK I+VGIPFPN+NDIQV+LKKK+ND Y+ SKNLLSGNEWYC QA
Sbjct: 663 RGKVSEGIDFSDDNARVVIIVGIPFPNVNDIQVALKKKFNDAYKMSKNLLSGNEWYCQQA 722
Query: 676 FRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKS 735
FRALNQA GRCIRH+FDYGAI+LLDERFQEERNR +ISKWLRKSIKQ+D+F+ S+E LKS
Sbjct: 723 FRALNQAAGRCIRHKFDYGAIMLLDERFQEERNRTYISKWLRKSIKQFDNFEQSMEELKS 782
Query: 736 FFRDVKGWVGKKMFNGLENSDNDVDHVSSMDQCKEVTKQNTQELNKSDHSGQNVQSISKY 795
FF +K + + L NS+N+ +H++S C S + I K+
Sbjct: 783 FFSHIKERISNNKESELPNSENE-EHITST--CP---------------SSRRRMKIGKF 824
Query: 796 DPFSHQKSQGNFEVQTSLQTDQNNSCIEYIDLERMNDKNNHSIDSSKGSTRKENKKLNSY 855
D F+H+ + + +V+ +CI IDLE T N + S
Sbjct: 825 DKFNHRGQKAHEDVK---------NCI--IDLE------------CSVETETRNHEFLSM 861
Query: 856 DNSGQKLHSSVKYDSFPGLNLLDEVEVQEFVQLDRVSSCKDYINTQCSLQKSSRCCEASS 915
+ + P ++ E + V KD +T ++ S +
Sbjct: 862 NTVLE----------VPDSPIVQETPCVDIVGATSPRESKDERSTSTVIEAYSELSDQ-- 909
Query: 916 MPFSNEDPELLLVKETPAMDDNNTMASPGSLSKDGNSSSTIFQASTQSPDQLSVHSQSL- 974
S++ L+ +P + + + +P ++ + ++ F T+S +SV+S +
Sbjct: 910 --LSHQSLPLIKSTRSPLTSETSMLNTP---ERNVSVNAYSFAQDTESSLNMSVNSHTQK 964
Query: 975 ---TNPVRVPSSAQPEMVVTPEKEVTGDTSNLPPERDSSLSSSVNSHTQKRRKTMVSPSV 1031
+ + + AQ E + P+ T N PE +S SS+ S + + SP
Sbjct: 965 RRKSMGITITKLAQEEFLTDPK------TKN--PECNSVDRSSIIS------RNLTSP-- 1008
Query: 1032 DLMLMASREANRRIEFNSETNYVKNKSKTS--NNCAESHLSSTPVMDKTLQISCSLCRSP 1089
++ N I + + N ++ N+ + +LSS MDK L +SC+LCRSP
Sbjct: 1009 -------KDTNYEILLTEKKSNGLNVTQMPKLNDTSPVYLSSGLPMDKKLHLSCALCRSP 1061
Query: 1090 LGLPENHLYVRCSVTSSAKAHLVSLLKQR--QELCANVTSIPVIMTDISSVDQLLTNQSF 1147
LG PENHL + CS T S+K HL+S+ ++R + + SI +I+TDI V+Q L +S
Sbjct: 1062 LGRPENHLNITCSFTVSSKTHLISIYEERFKAQTANSSASIQLIITDILFVNQRLLVRS- 1120
Query: 1148 GGASGQGIWCEEDGCVYNTLFCPFCSSPSNCLGVQIVASNALNFQLLNKILFYLDRLEIR 1207
SG+GIW EEDGCVYN +FCPFC S NC+GVQI+A++A N LLNK++F++D LEI+
Sbjct: 1121 SKNSGRGIWSEEDGCVYNYVFCPFCYS-DNCIGVQIMATDASNIPLLNKVMFFVDCLEIQ 1179
Query: 1208 --IPESGKFKSEAKDSSPITHSAMDKVAAFSCIEKFSYSPILEDSGGWRSTKSKLRLPKK 1265
++GK S K+ SP++ SA K A IE FSYSP SGGWRSTK K+R +K
Sbjct: 1180 DLKADTGK-ASINKEVSPVSSSAKSKYAVMEPIENFSYSPSPLTSGGWRSTKLKVR--RK 1236
Query: 1266 G 1266
G
Sbjct: 1237 G 1237
>gi|255539256|ref|XP_002510693.1| brca1 interacting protein helicase 1 brip1, putative [Ricinus
communis]
gi|223551394|gb|EEF52880.1| brca1 interacting protein helicase 1 brip1, putative [Ricinus
communis]
Length = 1248
Score = 1235 bits (3195), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 612/881 (69%), Positives = 699/881 (79%), Gaps = 53/881 (6%)
Query: 6 NPNPNYRKPLNAYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGT 65
NPNP K NAYH+GGIQVEFPYQPYG QL FM RVISTLDRA RDGHCHALLESPTGT
Sbjct: 10 NPNP---KSKNAYHIGGIQVEFPYQPYGPQLAFMGRVISTLDRAVRDGHCHALLESPTGT 66
Query: 66 GKSLSLLCSTLAWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTN 125
GKSLSLLCSTLAWQQN K K QLA+++ SKP+ EA+TDP+ +GGGFIPE+QPS+IPPS N
Sbjct: 67 GKSLSLLCSTLAWQQNYKSKQQLADLTQSKPNPEAITDPIGHGGGFIPETQPSSIPPSGN 126
Query: 126 GQTAQVAMNNKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNK 185
+ AQ A +K KKK PTIFY+SRTH QI+QVI EY+KTAYRVPMAVLASR+HYCTN
Sbjct: 127 LEAAQPAAVSKTQKKKAAPTIFYSSRTHGQITQVIREYRKTAYRVPMAVLASRRHYCTNA 186
Query: 186 YVRDKENIDEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVR 245
+V KENIDEECKLLL D + GC QFKN HKV+GHPSLQ+GGCHEVHDIEDLV VG+VVR
Sbjct: 187 HVNGKENIDEECKLLLKDPDAGCLQFKNAHKVKGHPSLQRGGCHEVHDIEDLVKVGKVVR 246
Query: 246 GCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSV 305
GCSYYAARSMADDAQLVFCPY+Y+INPVIRGAME+DI+GAILILDEAHNIEDIARDAGSV
Sbjct: 247 GCSYYAARSMADDAQLVFCPYNYVINPVIRGAMEIDIRGAILILDEAHNIEDIARDAGSV 306
Query: 306 DIDEDVLLKLQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTG 365
D++ED+L KLQ ELEQ+C N IYQPL EMTQDL+ WI++RK+TL K FQH+FS W+G
Sbjct: 307 DVEEDILYKLQTELEQLCVHNTSIYQPLYEMTQDLLSWIDQRKSTLQKHGFQHYFSSWSG 366
Query: 366 DKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVITLEGLFSSLTYFF 425
DKALRELQEANIS+QCFPILL+CA KAIK ATDTE ++ HLSGM+VI LEGLFSSLTYFF
Sbjct: 367 DKALRELQEANISQQCFPILLDCALKAIKAATDTEPDIAHLSGMAVIVLEGLFSSLTYFF 426
Query: 426 SRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGT 485
SRNG HVSDYQLALQ++IKRD K+P G WT TLSLWCLNPAVVF+D+A+LSLS+ILTSGT
Sbjct: 427 SRNGCHVSDYQLALQRHIKRDRKSPVGEWTLTLSLWCLNPAVVFRDIADLSLSVILTSGT 486
Query: 486 LSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTAD------- 538
LSPMNSFSSELGVQFGTCLEAPHVID + QV +VISTGPDNYPLNASYKTAD
Sbjct: 487 LSPMNSFSSELGVQFGTCLEAPHVIDNESQVWAAVISTGPDNYPLNASYKTADEFAFQDA 546
Query: 539 ---------------------GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDF 577
YKLMEKLCNRWRETGQWSRLNAKK LFVEP+G +E+F
Sbjct: 547 LGKTLEEICMIVPAGSLVFFPSYKLMEKLCNRWRETGQWSRLNAKKSLFVEPRGSQEEEF 606
Query: 578 EIVLKHYYNSISQGSKCAVVRKKRVKREGNNDL-NTIESQENANKKGASFLAVCRGK--- 633
+ VLK YY+SI + + AV RKKRVKR DL +ES EN KGA+FLAVCRGK
Sbjct: 607 DSVLKGYYDSICKCNTHAVGRKKRVKRL---DLKKAVESTENLG-KGAAFLAVCRGKVSE 662
Query: 634 ------------IVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQ 681
IVVGIPFPNI DIQV LKK YNDTY++SKNLLSGNEWYC QAFRALNQ
Sbjct: 663 GMDFSDDNARVVIVVGIPFPNILDIQVRLKKSYNDTYKTSKNLLSGNEWYCYQAFRALNQ 722
Query: 682 AIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFRDVK 741
AIGRCIRHRFDYGAIILLDER+++E+NR +ISKWLRKSI QYDS+ S+EGLKSFFRDVK
Sbjct: 723 AIGRCIRHRFDYGAIILLDERYKKEQNRMYISKWLRKSICQYDSYSMSIEGLKSFFRDVK 782
Query: 742 GWVGKKMFNGLENSDNDVDHVSSMDQCKEVTKQNTQELNKSDHSGQNVQSISKYDPFSHQ 801
+GKKM + L NS+ + +S + T++ Q+LNKSD+ + S K + SH
Sbjct: 783 ENIGKKMVDQLPNSETEGQKISPREPANGFTRKKNQKLNKSDNCAGKLVSSMKCNAISHL 842
Query: 802 KSQGNFEVQTSLQTDQN-NSCIEYIDLERMNDKNNHSIDSS 841
KSQ E Q+ +Q DQ+ +S E D+ER K + ++ S
Sbjct: 843 KSQDYIE-QSYMQIDQDIDSRREITDVERDFPKESRFLEES 882
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 219/451 (48%), Positives = 296/451 (65%), Gaps = 38/451 (8%)
Query: 839 DSSKGSTRKENKKLNSYDNSGQKLHSSVKYDSFPGLNLLDEVEVQEFVQLDR-VSSCKDY 897
+ + G TRK+N+KLN DN KL SS+K ++ L D +E Q ++Q+D+ + S ++
Sbjct: 807 EPANGFTRKKNQKLNKSDNCAGKLVSSMKCNAISHLKSQDYIE-QSYMQIDQDIDSRREI 865
Query: 898 INTQCSLQKSSRCCEASSMPFSNEDPELLLVKETPAMDDNNTMASPGSLSKDGNSSSTIF 957
+ + K SR E SS EDPE+ LVKETP M N T AS GS SKDGNSS T+
Sbjct: 866 TDVERDFPKESRFLEESS----QEDPEMTLVKETPGMGFNGTTASSGSFSKDGNSSLTMI 921
Query: 958 QASTQSPDQLSVHSQSLTNPVRVPSSAQPEMVVTPEKEVTGDTSNLPPERDSSLSSSVNS 1017
QAS + DQ S +S SLTN + P A + VTP+K+ +T +L PE +S+L+ SVNS
Sbjct: 922 QASVEHTDQESSYSVSLTNASKDPGKACCSLAVTPKKDFNANTCSLIPEAESTLNLSVNS 981
Query: 1018 HTQKRRKTMVSPSVDLM-------------------LMASREANRRIEFNSETNYVKNKS 1058
HTQK+R+ + P ++L+ MAS++ANRRIEF+ T+ +++S
Sbjct: 982 HTQKKRQPIGLPFINLVEGPDSPDMESPGCFRSTTDTMASKDANRRIEFDLATDSAEHQS 1041
Query: 1059 KTS--------NNCAESHLSSTPVMDKTLQISCSLCRSPLGLPENHLYVRCSVTSSAKAH 1110
S NNCA S ++S PVMD+ LQISCSLC+SPLGLPEN LYVRCS+TS++K H
Sbjct: 1042 MESKAPRVLPTNNCAPSSINSDPVMDQKLQISCSLCKSPLGLPENQLYVRCSLTSTSKIH 1101
Query: 1111 LVSLLKQRQELCANVT-SIPVIMTDISSVDQLLTNQSFGGASGQGIWCEEDGCVYNTLFC 1169
L SL K+R E C+N T S+PV+M DI+SVDQ L N + G+G+WCEEDGCV+N+++C
Sbjct: 1102 LTSLGKERFEYCSNNTKSVPVLMADIASVDQRLYNITLKDNPGRGVWCEEDGCVFNSIYC 1161
Query: 1170 PFCSSPSNCLGVQIVASNALNFQLLNKILFYLDRLEIRIPESGKFKSEAKDSSPITHSAM 1229
PFCSS SNCLGVQI+A++A N QLLNKILFY D LEI+ E+ A + +M
Sbjct: 1162 PFCSS-SNCLGVQIMATDASNVQLLNKILFYFDGLEIQNLEAS--TDRASKQKEVHSPSM 1218
Query: 1230 DKVAAFSCIEKFSYSPILEDSGGWRSTKSKL 1260
DK AAF+ I++FSYSP ++SGGWR+T+ K+
Sbjct: 1219 DKTAAFNSIDRFSYSP-HQNSGGWRTTRPKV 1248
>gi|240254129|ref|NP_173495.5| RAD3-like DNA-binding helicase protein [Arabidopsis thaliana]
gi|332191893|gb|AEE30014.1| RAD3-like DNA-binding helicase protein [Arabidopsis thaliana]
Length = 1175
Score = 1063 bits (2750), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 521/837 (62%), Positives = 629/837 (75%), Gaps = 59/837 (7%)
Query: 10 NYRKPLNAYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSL 69
N + P N Y +GG+QVEFPYQPYG+QL FM RVISTLDRAQRDGHCHALLESPTGTGKSL
Sbjct: 19 NSKNPKNVYQIGGLQVEFPYQPYGTQLAFMSRVISTLDRAQRDGHCHALLESPTGTGKSL 78
Query: 70 SLLCSTLAWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTA 129
SLLCS LAWQQN K + N+SHSK EA TDPL +GGGFIPE+QPS P STN + A
Sbjct: 79 SLLCSVLAWQQNYKSRLLKGNLSHSKAAPEAATDPLNHGGGFIPETQPSDTPASTNVEKA 138
Query: 130 QVAMNNKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRD 189
+ A K+ PTI+YASRTHSQI+QVI EY+KT YRVPMAVLASRKHYCTN++V
Sbjct: 139 ETATK----KRTKIPTIYYASRTHSQITQVIREYRKTGYRVPMAVLASRKHYCTNRHVLG 194
Query: 190 KENIDEECKLLLGDR-NLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCS 248
K+N+D+EC+LLL D+ N+ C +FKNV+K+ HPSLQ G +EVHDIEDLV VG+ VRGC
Sbjct: 195 KDNVDDECRLLLKDKANIQCSEFKNVNKITSHPSLQPRGHNEVHDIEDLVKVGKNVRGCP 254
Query: 249 YYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDID 308
Y+A+ SMA++AQLVFCPYSYI+NPVIR +EVD+KGAI+I DEAHN+EDIAR+AGS++++
Sbjct: 255 YFASWSMAENAQLVFCPYSYIVNPVIRAGVEVDLKGAIIIFDEAHNMEDIAREAGSINLE 314
Query: 309 EDVLLKLQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKA 368
ED L KLQ ELEQ+ PMIYQPL E+ + L+ WI R+K +LAKR+FQH+FS WTGDKA
Sbjct: 315 EDTLFKLQNELEQMSVAQPMIYQPLCEVVEGLISWIGRKKDSLAKRDFQHYFSSWTGDKA 374
Query: 369 LRELQEANISRQCFPILLECATKAIKEA--TDTESELPHLSGMSVITLEGLFSSLTYFFS 426
LREL+E+NI+R+CFPILLEC TKAI+ + + ES++ +LSG+SV+TLE LFSSLTYFFS
Sbjct: 375 LRELEESNITRECFPILLECFTKAIRTSKEAEMESDMLYLSGISVLTLEELFSSLTYFFS 434
Query: 427 RNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTL 486
RNGSH+ DYQL LQ+ KR +P G WTHT SLWC+NPAVVFKD+A++SLS+ILTSGTL
Sbjct: 435 RNGSHILDYQLGLQRSTKRG--DPSGTWTHTFSLWCMNPAVVFKDLADISLSVILTSGTL 492
Query: 487 SPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTADG------- 539
SPMNSFSSELG+QFGT LEAPHVID ++QV IS GP NYPLNASYKTAD
Sbjct: 493 SPMNSFSSELGMQFGTSLEAPHVIDPNMQVWAGAISNGPSNYPLNASYKTADAYSFQDAL 552
Query: 540 ---------------------YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFE 578
YKLMEKLC RWRET QWSRL KK LFVEP+GG+Q++F+
Sbjct: 553 GKSLEEICTIVPGGSLVFFPSYKLMEKLCMRWRETEQWSRLCLKKDLFVEPRGGAQDEFD 612
Query: 579 IVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGK----- 633
VLK YY+SI +G + R +R K+ G T ++ +KKGA+FLAVCRGK
Sbjct: 613 SVLKGYYDSI-RGKNKIIGRNRRAKKAGPIKTET----QDDSKKGAAFLAVCRGKVSEGI 667
Query: 634 ----------IVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAI 683
I+VGIPFPN++DIQV LKKKYNDTY+SSK+LL G+EWYC QA+RALNQA
Sbjct: 668 DFADDNARAVIIVGIPFPNLHDIQVGLKKKYNDTYKSSKSLLGGSEWYCQQAYRALNQAA 727
Query: 684 GRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFRDVKGW 743
GRCIRHRFDYGAII LDER++E+RNRA ISKWLR+SIK YD+F+AS+EGL+SFF VK
Sbjct: 728 GRCIRHRFDYGAIIFLDERYKEQRNRASISKWLRQSIKVYDNFEASMEGLRSFFNSVKEQ 787
Query: 744 VGKKMFNGLENSDNDVDHVSSMDQCKEVTKQNTQELNKSDHSGQNVQSISKYDPFSH 800
V KM E+S + SS Q KE ++ Q NKS V+ + +P H
Sbjct: 788 VDSKMLGSQEDSVE--KNFSSEKQSKEFRRKENQIQNKSSQVEPKVEDYTNSNPKYH 842
Score = 140 bits (353), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 72/158 (45%), Positives = 104/158 (65%), Gaps = 8/158 (5%)
Query: 1115 LKQRQELCANVTSIPVIMTDISSVDQLLTNQ----SFGGASGQGIWCEEDGCVYNTLFCP 1170
LK+R+ + V + V +D + + NQ F G GQGIWCE+DGCV+NT++CP
Sbjct: 1011 LKRRKFTSSPVIDLEVENSDAPRPNCSMVNQRLCRKFEGLKGQGIWCEQDGCVFNTIYCP 1070
Query: 1171 FCSSPSNCLGVQIVASNALNFQLLNKILFYLDRLEIRIPESGKFKSEAKDSSPI--THSA 1228
FCS P+ CLGVQ++A+++ N Q L+KILF+ D LE+ E+ S K P+ T++A
Sbjct: 1071 FCSIPNTCLGVQVMATDSSNVQFLSKILFFADHLEV-TNEAASKDSTLKHKEPLAETNAA 1129
Query: 1229 MDKVAAFSCIEKFSYSP-ILEDSGGWRSTKSKLRLPKK 1265
+DK I++F+YSP ++SGGWR+TKSKLRLPK+
Sbjct: 1130 VDKSDVLKSIDRFAYSPNQQQESGGWRTTKSKLRLPKR 1167
Score = 86.3 bits (212), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 130/286 (45%), Gaps = 39/286 (13%)
Query: 777 QELNKSDHSGQNVQSISKYDPFSHQKSQGNFEVQTSLQTDQNNSCIEYIDLERMN----- 831
++ N++ S QSI YD NFE NS E +D + +
Sbjct: 749 EQRNRASISKWLRQSIKVYD---------NFEASMEGLRSFFNSVKEQVDSKMLGSQEDS 799
Query: 832 -DKNNHSIDSSKGSTRKENK----------KLNSYDNSGQKLHSSVKYDSFPGLN----- 875
+KN S SK RKEN+ K+ Y NS K H + +F G +
Sbjct: 800 VEKNFSSEKQSKEFRRKENQIQNKSSQVEPKVEDYTNSNPKYHFMYESKAF-GYHRDVKP 858
Query: 876 -LLDEVE-----VQEFVQL-DRVSSCKDYINTQCSLQKSSRCCEASSMPFSNEDPELLLV 928
+ +++ Q FVQ+ + C++ I+ +C +Q CE SS+ +E PE V
Sbjct: 859 KIAEDLRSMGHSAQTFVQVKEEAECCREVIDLECGVQPDLGYCEVSSVTNCDEAPETSFV 918
Query: 929 KETPAMDDNNTMASPGSLSKDGNSS-STIFQASTQSPDQLSVHSQSLTNPVRVPSSAQPE 987
+ET M + ++ASP S S + +SS +T+ S SPDQL S N + P +
Sbjct: 919 QETSGMINGISVASPCSCSMNESSSPATVGLRSPGSPDQLLKQHISTPNFRKSPLGTESS 978
Query: 988 MVVTPEKEVTGDTSNLPPERDSSLSSSVNSHTQKRRKTMVSPSVDL 1033
+V T E+ G T +L E +SS + SVNS KRRK SP +DL
Sbjct: 979 VVATSERYSFGGTRSLTLEAESSFNMSVNSQALKRRKFTSSPVIDL 1024
>gi|297850492|ref|XP_002893127.1| hypothetical protein ARALYDRAFT_889526 [Arabidopsis lyrata subsp.
lyrata]
gi|297338969|gb|EFH69386.1| hypothetical protein ARALYDRAFT_889526 [Arabidopsis lyrata subsp.
lyrata]
Length = 1171
Score = 1060 bits (2742), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 574/1093 (52%), Positives = 708/1093 (64%), Gaps = 158/1093 (14%)
Query: 10 NYRKPLNAYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSL 69
N + P N Y +GG+QVEFPYQPYG+QL FM RVISTLDRAQRDGHCHALLESPTGTGKSL
Sbjct: 19 NSKNPKNVYQIGGLQVEFPYQPYGTQLAFMSRVISTLDRAQRDGHCHALLESPTGTGKSL 78
Query: 70 SLLCSTLAWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTA 129
SLLCS LAWQQN K + N+SHSK EA TDPL +GGGFIPE+QPS P STN + A
Sbjct: 79 SLLCSVLAWQQNYKSRLLKGNLSHSKAAPEAATDPLNHGGGFIPETQPSDTPASTNVEKA 138
Query: 130 QVAMNNKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRD 189
+ A K+ PTI+YASRTHSQI+QVI EY+KT YRVPMAVLASRKHYCTN++V
Sbjct: 139 ETATK----KRTKIPTIYYASRTHSQITQVIREYRKTGYRVPMAVLASRKHYCTNRHVLG 194
Query: 190 KENIDEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSY 249
K+N+D+E NV+K+ HPSLQ G +EVHDIEDLV VG+ VRGC Y
Sbjct: 195 KDNVDDEW---------------NVNKITSHPSLQPRGHNEVHDIEDLVKVGKNVRGCPY 239
Query: 250 YAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAH---------------- 293
+A+ SMA++AQLVFCPYSYI+NPVIR +EVD+KGAI+I DEA
Sbjct: 240 FASWSMAENAQLVFCPYSYIVNPVIRAGVEVDLKGAIIIFDEAQFLSMLVMLMIRPSTKS 299
Query: 294 -----NIEDIARDAGSVDIDEDVLLKLQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRK 348
N+EDIAR+AG KLQ ELEQ+ PMIYQPL E+ + L+ WI R+K
Sbjct: 300 FTVHSNMEDIAREAG----------KLQNELEQMSLAQPMIYQPLCEVVEGLISWIGRKK 349
Query: 349 ATLAKREFQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEA--TDTESELPHL 406
+LAKR+FQH+FS WTGDKALREL+E+NI+R+CFPILLEC TKAI+ + + ES++ +L
Sbjct: 350 DSLAKRDFQHYFSSWTGDKALRELEESNITRECFPILLECFTKAIRTSKEAEMESDMLYL 409
Query: 407 SGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPA 466
SG+SV+TLE LFSSLTYFFSRNGSH+ DYQL LQ+ KR +P WTHT SLWC+NPA
Sbjct: 410 SGISVLTLEELFSSLTYFFSRNGSHILDYQLGLQRSTKRG--DPSRTWTHTFSLWCMNPA 467
Query: 467 VVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPD 526
VVFKD+A++SLSIILTSGTLSPMNSFSSELG+QFGT LEAPHVID ++QV IS GP
Sbjct: 468 VVFKDLADISLSIILTSGTLSPMNSFSSELGMQFGTSLEAPHVIDPNMQVWAGAISNGPS 527
Query: 527 NYPLNASYKTAD----------------------------GYKLMEKLCNRWRETGQWSR 558
NYPLNASYKTAD YKLMEKLC RWRETGQWSR
Sbjct: 528 NYPLNASYKTADTYSFQDALGKSLEEICTIVPGGSLIFFPSYKLMEKLCTRWRETGQWSR 587
Query: 559 LNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQEN 618
L KK LFVEP+GG+Q++F+ VLK YY+SI +G V R +R K+ G T ++
Sbjct: 588 LCLKKDLFVEPRGGAQDEFDSVLKGYYDSI-RGKNKLVGRNRRAKKAGPIKTET----QD 642
Query: 619 ANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKKYNDTYRSSKN 663
+KKGA+FLAVCRGK I+VGIPFPN++DIQV LKKKYNDTY+SSK+
Sbjct: 643 DSKKGAAFLAVCRGKVSEGIDFADDNARAVIIVGIPFPNLHDIQVGLKKKYNDTYKSSKS 702
Query: 664 LLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQY 723
LL G+EWYC QA+RALNQA GRCIRHRFDYGAII LDER++E+RNRA ISKWLR+SIK Y
Sbjct: 703 LLGGSEWYCQQAYRALNQAAGRCIRHRFDYGAIIFLDERYKEQRNRASISKWLRQSIKVY 762
Query: 724 DSFDASLEGLKSFFRDVKGWVGKKMFNGLENSDNDVDHVSSMD-QCKEVTKQNTQELNKS 782
D+F+AS+EGL+ FF VK V KM L + D+ V+ S++ Q KE ++ Q NKS
Sbjct: 763 DNFEASMEGLRYFFNSVKEQVDSKM---LGSQDDTVEKNFSLENQSKEYRRKENQIQNKS 819
Query: 783 DHSGQNVQSISKYDPFSHQKSQGNFEVQTSLQTDQNNSCIEYIDLERMNDKNNHSIDSSK 842
V+ + Y +N +ID
Sbjct: 820 SQVEPKVEDVENY--------------------TNSNPKYPFID---------------- 843
Query: 843 GSTRKENKKLNSYDNSGQKLHSSVKYDSFPGLNLLDEVEVQEFVQL-DRVSSCKDYINTQ 901
E+K + + K+ ++Y Q FVQ+ + C++ I+ +
Sbjct: 844 -----ESKAFGDHRDVEPKIAEDLRYMGH---------SAQTFVQVKEEAECCREVIDLE 889
Query: 902 CSLQKSSRCCEASSMPFSNEDPELLLVKETPAMDDNNTMASPGSLSKDGNSS-STIFQAS 960
C +Q CE SS+ +ED E VKE+ M + ++ASP S S + +SS +TI + S
Sbjct: 890 CGVQPEPGYCEVSSVTNYDEDLETSFVKESSGMINGISVASPCSCSVNESSSPTTIGRRS 949
Query: 961 TQSPDQLSVHSQSLTNPVRVPSSAQPEMVVTPEKEVTGDTSNLPPERDSSLSSSVNSHTQ 1020
+SPDQL S N + P A+ +V T E+ GDT +L E +SS + SVNS
Sbjct: 950 PRSPDQLLKQHISTPNFRKSPLGAESSVVATSERYSFGDTRSLTLEAESSFNMSVNSQAL 1009
Query: 1021 KRRKTMVSPSVDL 1033
KRRK SP +DL
Sbjct: 1010 KRRKFTSSPVIDL 1022
Score = 144 bits (362), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 79/162 (48%), Positives = 107/162 (66%), Gaps = 18/162 (11%)
Query: 1115 LKQRQELCANVTSIPVI--------MTDISSVDQLLTNQSFGGASGQGIWCEEDGCVYNT 1166
LK+R+ TS PVI + S V+Q L + F G+ GQGIWCE+DGCV+NT
Sbjct: 1009 LKRRK-----FTSSPVIDLEDENSDAPNCSMVNQRLCRK-FEGSKGQGIWCEQDGCVFNT 1062
Query: 1167 LFCPFCSSPSNCLGVQIVASNALNFQLLNKILFYLDRLEIRIPESGKFKSEAKDSSPI-- 1224
+ CPFCS P+ CLGVQ++A+++ N Q L+KILF+ D LE+ E+ S K P+
Sbjct: 1063 ISCPFCSIPNTCLGVQVMATDSSNVQFLSKILFFADHLEV-TNEAASKDSTLKHKEPLAE 1121
Query: 1225 THSAMDKVAAFSCIEKFSYSP-ILEDSGGWRSTKSKLRLPKK 1265
T++A+DK F IE+F+YSP +DSGGWR+TKSKLRLPK+
Sbjct: 1122 TNAAVDKSDVFKSIERFAYSPNQQQDSGGWRTTKSKLRLPKR 1163
>gi|449519585|ref|XP_004166815.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group J protein
homolog [Cucumis sativus]
Length = 1041
Score = 1052 bits (2720), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 533/834 (63%), Positives = 634/834 (76%), Gaps = 62/834 (7%)
Query: 4 EANPNPNYRKPLNAYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPT 63
++ PN YR N Y +GG+QVEFP++PYGSQL FM RVISTLDRAQR+GHCHALLESPT
Sbjct: 11 KSKPNRTYRLKKNVYRIGGVQVEFPFRPYGSQLEFMDRVISTLDRAQREGHCHALLESPT 70
Query: 64 GTGKSLSLLCSTLAWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIP-- 121
GTGKSLSLLCS+LAWQ+N K+KNQ AN H++P EA T+PL GGGFIPE QPS+
Sbjct: 71 GTGKSLSLLCSSLAWQKNFKIKNQDANFCHTRPAPEAATNPLGFGGGFIPEVQPSSKNIK 130
Query: 122 ---PSTNGQTAQVAMNNKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASR 178
ST+ +++ NNK KKK PTI+Y+SRTHSQISQVI EY+KTAYRVPMAVLASR
Sbjct: 131 GSLVSTDTESSLPGPNNKIRKKKTAPTIYYSSRTHSQISQVIREYRKTAYRVPMAVLASR 190
Query: 179 KHYCTNKYVRDKENIDEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLV 238
KH CTN VR K+N+DE+CKLLL D++ GC +FKN +KV+ HP+LQKGG HEVHDI+DLV
Sbjct: 191 KHLCTNPRVRGKDNLDEKCKLLLKDQDAGCSEFKNGNKVKCHPTLQKGGRHEVHDIQDLV 250
Query: 239 NVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDI 298
G+ V+GCSYYAARSMA +AQLVFCPYSYIINPVIR A+ VD+K AI+I DEAHNIEDI
Sbjct: 251 KTGEAVKGCSYYAARSMAYNAQLVFCPYSYIINPVIRRAIGVDVKDAIVIFDEAHNIEDI 310
Query: 299 ARDAGSVDIDEDVLLKLQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQH 358
AR GSVDI+ED L KLQMELEQ+C +N ++YQPL EMTQDL WI+RRK TL +REFQH
Sbjct: 311 ARHGGSVDIEEDTLNKLQMELEQLCFINYLVYQPLYEMTQDLKSWIDRRKTTLQEREFQH 370
Query: 359 FFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVITLEGLF 418
+ +CWTG+ A RELQEANI++QCFPILLECATKA K A+ T S+ HLSG+SV+TLEGLF
Sbjct: 371 YVTCWTGNHAQRELQEANITQQCFPILLECATKATKAASYTVSDDAHLSGLSVLTLEGLF 430
Query: 419 SSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLS 478
SSLTYFFSRNG H+SDYQLALQ+Y KRD + WT TLSLWCLNPAVVF+D+ +LSLS
Sbjct: 431 SSLTYFFSRNGCHMSDYQLALQRYTKRDPEKACAKWTVTLSLWCLNPAVVFRDIGDLSLS 490
Query: 479 IILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTAD 538
+ILTSGTLSP+NSFSSELGV+FGT LEAPHVIDV+ QV ++IS GP NYPLNASYKTAD
Sbjct: 491 VILTSGTLSPLNSFSSELGVRFGTSLEAPHVIDVESQVWPAIISIGPGNYPLNASYKTAD 550
Query: 539 G----------------------------YKLMEKLCNRWRETGQWSRLNAKKPLFVEPK 570
G YKLMEKL NRW ETGQWSRLNA+K LFVEP
Sbjct: 551 GYAFQDALGKSLEEIFFIAPGGCLVFFPSYKLMEKLRNRWSETGQWSRLNARKSLFVEPC 610
Query: 571 GGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVC 630
GG+QEDF+ +LK YY++I G AV +K + D + + EN KGA+ LAV
Sbjct: 611 GGAQEDFDSILKGYYDTIRLGDNFAVGKKVK------PDESYVFGCENP--KGAALLAVF 662
Query: 631 RGK---------------IVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQA 675
RGK I+VGIPFP+IN IQV+LKKK+ND Y+ SKNLLSGNEWYC QA
Sbjct: 663 RGKVSEGIDFSDDNARVVIIVGIPFPDINGIQVALKKKFNDKYKMSKNLLSGNEWYCQQA 722
Query: 676 FRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKS 735
FRALNQA GRCIRH+FDYGAI+LLDERFQEERNR +ISKWLRKSIKQ+D+F+ S+E LKS
Sbjct: 723 FRALNQAAGRCIRHKFDYGAIVLLDERFQEERNRTYISKWLRKSIKQFDNFEQSMEELKS 782
Query: 736 FFRDVKGWVGKKMFNGLENSDNDVDHVSSM--DQCKEVTKQNTQELNKSDHSGQ 787
FF +K + K + L S N+ +H++S C+ + +E +K ++ GQ
Sbjct: 783 FFSHIKERISNKTESELPKSVNE-EHITSTCPSSCR---RTKIEEFDKFNYRGQ 832
Score = 142 bits (359), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/166 (46%), Positives = 105/166 (63%), Gaps = 8/166 (4%)
Query: 1048 NSETNYVKNKSKTSNNCAESHLSSTPVM----DKTLQISCSLCRSPLGLPENHLYVRCSV 1103
N E N V S S N +S ++ DK L +SC+LCR+PLG PENHL + CS
Sbjct: 858 NHECNSVDRSSAISGNLTSPKDTSDEILLTEEDKKLHLSCALCRNPLGRPENHLNITCSF 917
Query: 1104 TSSAKAHLVSLLKQR--QELCANVTSIPVIMTDISSVDQLLTNQSFGGASGQGIWCEEDG 1161
T S+K HL+S+ K+R + + SI +I+TDI ++Q L +S S GIW EEDG
Sbjct: 918 TVSSKTHLISIYKERFKAQTANSSASIQLIITDILFINQRLLVRS-SKNSACGIWSEEDG 976
Query: 1162 CVYNTLFCPFCSSPSNCLGVQIVASNALNFQLLNKILFYLDRLEIR 1207
CVYN +FCPFC S NC+GVQI+A+NA N LL K++F++ LEI+
Sbjct: 977 CVYNXVFCPFCFS-DNCIGVQIMATNASNIPLLYKVMFFVGCLEIQ 1021
>gi|449455726|ref|XP_004145602.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group J protein
homolog [Cucumis sativus]
Length = 1042
Score = 1028 bits (2658), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 526/835 (62%), Positives = 627/835 (75%), Gaps = 63/835 (7%)
Query: 4 EANPNPNYRKPLNAYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPT 63
++ PN YR N Y +GG+QVEFP++PYGSQL FM RVISTLDRAQR+GHCHALLESPT
Sbjct: 11 KSKPNRTYRLKKNVYRIGGVQVEFPFRPYGSQLEFMDRVISTLDRAQREGHCHALLESPT 70
Query: 64 GTGKSLSLLCSTLAWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIP-- 121
GTGKSLSLLCS+LAWQ+N K+KNQ AN H++P EA T+PL GGGFIPE QPS+
Sbjct: 71 GTGKSLSLLCSSLAWQKNFKIKNQDANFCHTRPAPEAATNPLGFGGGFIPEVQPSSKNIK 130
Query: 122 ---PSTNGQTAQVAMNNKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASR 178
ST+ +++ NNK KKK PTI+Y+SRTHSQISQVI EY+KTAYRVPMAVLASR
Sbjct: 131 GSLVSTDTESSLPGPNNKIRKKKTAPTIYYSSRTHSQISQVIREYRKTAYRVPMAVLASR 190
Query: 179 KHYCTNKYVRDKENIDEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLV 238
KH CTN VR K+N+DE+CKLLL D++ GC +FKN +KV+ HP+LQKGG HEVHDI+DLV
Sbjct: 191 KHLCTNPRVRGKDNLDEKCKLLLKDQDAGCSEFKNGNKVKCHPTLQKGGRHEVHDIQDLV 250
Query: 239 NVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDI 298
G+ V+GCSYYAARSMADDAQLVFCPYSYIINPVIR A+ VD+K AI+I DEAHNIEDI
Sbjct: 251 KTGEAVKGCSYYAARSMADDAQLVFCPYSYIINPVIRRAIGVDVKDAIVIFDEAHNIEDI 310
Query: 299 ARDAGSVDIDEDVLLKLQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQH 358
AR GSVDI+ED L KLQMELEQ+C +N ++YQPL EMTQDL WI+RRK TL +REFQH
Sbjct: 311 ARHGGSVDIEEDTLNKLQMELEQLCFINYLVYQPLYEMTQDLKSWIDRRKTTLQEREFQH 370
Query: 359 FFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVITLEGLF 418
+ +CWTG+ A RELQEANI++QCFPILLECATKA K A+ T S+ HLSG+SV+TLEGLF
Sbjct: 371 YVTCWTGNHAQRELQEANITQQCFPILLECATKATKAASYTVSDDAHLSGLSVLTLEGLF 430
Query: 419 SSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLS 478
SSLTYFFSRNG H+SDYQLALQ+Y KRD + WT TLSLWCLNPAVVF+D+ +LSLS
Sbjct: 431 SSLTYFFSRNGCHMSDYQLALQRYTKRDPEKACAKWTVTLSLWCLNPAVVFRDIGDLSLS 490
Query: 479 IILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASY---- 534
+ILTSGTLSP+NSFSSELGV+FGT LEAPHVIDV+ QV ++IS GP L +
Sbjct: 491 VILTSGTLSPLNSFSSELGVRFGTSLEAPHVIDVESQVWPAIISIGPGYLNLYVRFSCLI 550
Query: 535 -----KTADG--------------------YKLMEKLCNRWRETGQWSRLNAKKPLFVEP 569
K A G YKLMEKL NRW ETGQWSRLNA+K LFVEP
Sbjct: 551 LAIFLKDALGKSLEEIFFIAPGGCLVFFPSYKLMEKLRNRWSETGQWSRLNARKSLFVEP 610
Query: 570 KGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAV 629
GG+QEDF+ +LK YY++I G AV +K + D + + EN KGA+ LAV
Sbjct: 611 CGGAQEDFDSILKGYYDTIRLGDNFAVGKKVK------PDESYVFGCENP--KGAALLAV 662
Query: 630 CRGK---------------IVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQ 674
RGK I+VGIPFP+IN IQV+LKKK+ND Y+ SKNLLSGNEWYC Q
Sbjct: 663 FRGKVSEGIDFSDDNARVVIIVGIPFPDINGIQVALKKKFNDKYKMSKNLLSGNEWYCQQ 722
Query: 675 AFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLK 734
AFRALNQA GRCIRH+FDYGAI+LLDERFQEERNR +ISKWLRKSIKQ+D+F+ S+E LK
Sbjct: 723 AFRALNQAAGRCIRHKFDYGAIVLLDERFQEERNRTYISKWLRKSIKQFDNFEQSMEELK 782
Query: 735 SFFRDVKGWVGKKMFNGLENSDNDVDHVSSM--DQCKEVTKQNTQELNKSDHSGQ 787
SFF +K + K + L S N+ +H++S C+ + +E +K ++ GQ
Sbjct: 783 SFFSHIKERISNKTESELPKSVNE-EHITSTCPSSCR---RTKIEEFDKFNYRGQ 833
Score = 142 bits (358), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/166 (46%), Positives = 105/166 (63%), Gaps = 8/166 (4%)
Query: 1048 NSETNYVKNKSKTSNNCAESHLSSTPVM----DKTLQISCSLCRSPLGLPENHLYVRCSV 1103
N E N V S S N +S ++ DK L +SC+LCR+PLG PENHL + CS
Sbjct: 859 NHECNSVDRSSAISGNLTSPKDTSDEILLTEEDKKLHLSCALCRNPLGRPENHLNITCSF 918
Query: 1104 TSSAKAHLVSLLKQR--QELCANVTSIPVIMTDISSVDQLLTNQSFGGASGQGIWCEEDG 1161
T S+K HL+S+ K+R + + SI +I+TDI ++Q L +S S GIW EEDG
Sbjct: 919 TVSSKTHLISIYKERFKAQTANSSASIQLIITDILFINQRLLVRS-SKNSACGIWSEEDG 977
Query: 1162 CVYNTLFCPFCSSPSNCLGVQIVASNALNFQLLNKILFYLDRLEIR 1207
CVYN +FCPFC S NC+GVQI+A+NA N LL K++F++ LEI+
Sbjct: 978 CVYNXVFCPFCFS-DNCIGVQIMATNASNIPLLYKVMFFVGCLEIQ 1022
>gi|147865346|emb|CAN84083.1| hypothetical protein VITISV_018998 [Vitis vinifera]
Length = 1261
Score = 991 bits (2562), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 568/1146 (49%), Positives = 714/1146 (62%), Gaps = 190/1146 (16%)
Query: 213 NVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINP 272
N+HKV+GHPSLQKGGCHE HDIEDLV VGQVV+GC+YYAAR MAD+AQLVFCPYSYIINP
Sbjct: 146 NMHKVKGHPSLQKGGCHEAHDIEDLVKVGQVVKGCAYYAARDMADNAQLVFCPYSYIINP 205
Query: 273 VIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQVCSVNPMIYQP 332
VIRGAME+DI+GAILILDEAHNIED+ARDAGSVD++EDVL KLQ EL Q+C + MIYQP
Sbjct: 206 VIRGAMELDIEGAILILDEAHNIEDMARDAGSVDVEEDVLHKLQTELGQLCPADAMIYQP 265
Query: 333 LIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRELQEANISRQCFPILLECATKA 392
L EMTQD++ WI+R+K TL KREFQH+FSCWTGDKALRELQEANIS+Q FPIL ECA KA
Sbjct: 266 LYEMTQDIISWIDRKKNTLEKREFQHYFSCWTGDKALRELQEANISQQSFPILQECARKA 325
Query: 393 IKEATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGG 452
IK A D ES + HLSGMSVITLEGL+S+L+YFFS NG H DYQLALQ+Y+K+D+ + G
Sbjct: 326 IKAAIDIESRVAHLSGMSVITLEGLYSALSYFFSENGLHTVDYQLALQRYVKKDAGSVAG 385
Query: 453 NWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDV 512
+WT T SLWCLNPAVVF+ +A+LSLS+ILTSGTLSPM+SFSSELGVQFGTCLEAPHVID+
Sbjct: 386 SWTCTFSLWCLNPAVVFRGIADLSLSVILTSGTLSPMHSFSSELGVQFGTCLEAPHVIDI 445
Query: 513 DLQVLTSVISTGPDNYPLNASYKTADGY----------------------------KLME 544
+ Q+ ++ ST P NYPLNASYKTAD Y KLME
Sbjct: 446 ESQLWAAIFSTSPGNYPLNASYKTADAYAFQDALGKSLEEIFKIVPGGTLVFFPSYKLME 505
Query: 545 KLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKR 604
KLC+RWRET EP+GGSQ+DFE +LK YY S+ +G+K + RK+R K+
Sbjct: 506 KLCSRWRET--------------EPRGGSQDDFEPILKAYYESVRRGTKPTLGRKRRTKK 551
Query: 605 EGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNIN-------------------- 644
+ + ESQ+N+ KKGA+FLAV RGK+ GI F + N
Sbjct: 552 MDLSQSDEKESQDNSKKKGAAFLAVFRGKVSEGIDFSDENARAVVSFLPSLKSNIHFNIS 611
Query: 645 -----DIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILL 699
DIQV+ KKKYND Y+SSK+LLSGNEWYC+QAFRALNQA
Sbjct: 612 SVNSHDIQVAQKKKYNDMYKSSKDLLSGNEWYCHQAFRALNQAA---------------- 655
Query: 700 DERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFRDVKGWVGKKMFNGLENSDNDV 759
DERF+E+RN A+ISKWLRKSIKQY+SFD SLE LKSFF D K VG K N L++++ +V
Sbjct: 656 DERFREDRNTAYISKWLRKSIKQYESFDMSLERLKSFFIDAKEQVGDKAVNVLQSAETNV 715
Query: 760 DHVSSMDQCKEVTKQNTQELNKSDHSGQNVQS----------------ISKYDPFSH-QK 802
+ SMDQ T++ Q+L K DH Q V S ++Y+ F H Q+
Sbjct: 716 QEILSMDQIIGSTRKKNQKLKKPDHGVQKVVSNNTRVTKRTARICXSPTTEYNTFFHQQR 775
Query: 803 SQGNFEVQTSLQTDQN--NSCIEYIDLERMNDKNNHSIDSSKGSTRKENKKLNSYDNSGQ 860
S GN + Q + D+ + C EYIDLE K++ ++ ++ + ++
Sbjct: 776 SPGNTKFQKXVLKDEEGFSXCKEYIDLECSPQKDSRCSKATSPASSHDGPEV-------- 827
Query: 861 KLHSSVKYDSFPGLNLLDEVEVQEFVQLDRVSSCKDYINTQCSLQKSSRCCEAS---SMP 917
S VK PG++ Q S KD ++ +Q S+ + S SM
Sbjct: 828 ---SIVK--ETPGVD-------GNITQTSPXSFSKDENSSSTIIQASTDXPDQSLFHSMS 875
Query: 918 FSNEDPELLLVKETPAMDDNNTMASPGSLSKDGNSSSTIFQASTQSPDQLSV--HSQSLT 975
++N P+ + +P +D ++++ T+SP LSV H+Q
Sbjct: 876 YTNS-------SGPPSRAMCSLXVTP---ERDFIANTSNMMPETESPLNLSVNSHAQKRR 925
Query: 976 NPVRVPS--SAQPEMVVTPEKEVTGDTSNLPPERDSSLSSSVNSHTQKRRKTMVSPSVDL 1033
+ +PS Q E P+ + G N RD
Sbjct: 926 KSMILPSVNPTQAEHSDAPDAKTPGHIGNSMATRD------------------------- 960
Query: 1034 MLMASREANRRIEFNSETNYVKNKSK--------TSNNCAESHLSSTPVMDKTLQISCSL 1085
ANRRIEF + + ++K K T N+C S +SS MDK LQI CSL
Sbjct: 961 -------ANRRIEFGFGSKFSEDKLKKSNIXQLLTMNHCDASSVSSCCSMDKQLQIFCSL 1013
Query: 1086 CRSPLGLPENHLYVRCSVTSSAKAHLVSLLKQRQELCA--NVTSIPVIMTDISSVDQLLT 1143
CR+PLGLPEN LYV CS+TSS+K HL SLL+ E A TSIPV+++D SSV+Q L
Sbjct: 1014 CRNPLGLPENDLYVMCSLTSSSKVHLASLLRGSLESLAVNTTTSIPVVVSDSSSVNQRLC 1073
Query: 1144 NQSFGGASGQGIWCEEDGCVYNTLFCPFCSSPSNCLGVQIVASNALNFQLLNKILFYLDR 1203
N++ GGA G+WCEEDGCV+NT++CPFCS+P+NCLGVQI+A+NA N +LLNKILFY DR
Sbjct: 1074 NKTLGGAQEHGVWCEEDGCVFNTIYCPFCSTPNNCLGVQIMATNASNVELLNKILFYFDR 1133
Query: 1204 LEIRIPESGKFK-------SEAKDSSPITHSAMDKVAAFSCIEKFSY--SPILEDSGGWR 1254
LEI+ PE+ K SE KD SP + S D+V+ EK SY ++S GWR
Sbjct: 1134 LEIKNPEASTDKGIKNPESSEDKDLSPPSGSNSDEVSELDPFEKXSYKHQEPQQNSNGWR 1193
Query: 1255 STKSKL 1260
+TKSK+
Sbjct: 1194 TTKSKV 1199
Score = 207 bits (526), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 100/140 (71%), Positives = 113/140 (80%), Gaps = 1/140 (0%)
Query: 14 PLNAYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLC 73
P N YH+GGI VEFPYQPYGSQL FM RVISTLDRAQRDGHCHALLESPTGTGKSLSLLC
Sbjct: 10 PKNVYHIGGIAVEFPYQPYGSQLAFMGRVISTLDRAQRDGHCHALLESPTGTGKSLSLLC 69
Query: 74 STLAWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAM 133
S LAWQ+N + KN ++SHSKPD EA++DPL +GGGF+PE++PS+IP N + A A
Sbjct: 70 SALAWQKNYRPKNMNGDVSHSKPDPEALSDPLGHGGGFVPETEPSSIPAPENSEPASAA- 128
Query: 134 NNKNVKKKMTPTIFYASRTH 153
N KN KKK PTIFYAS H
Sbjct: 129 NGKNKKKKRKPTIFYASNMH 148
>gi|8886948|gb|AAF80634.1|AC069251_27 F2D10.21 [Arabidopsis thaliana]
Length = 1273
Score = 936 bits (2418), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 488/878 (55%), Positives = 590/878 (67%), Gaps = 137/878 (15%)
Query: 10 NYRKPLNAYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSL 69
N + P N Y +GG+QVEFPYQPYG+QL FM RVISTLDRAQRDGHCHALLESPTGTGKSL
Sbjct: 19 NSKNPKNVYQIGGLQVEFPYQPYGTQLAFMSRVISTLDRAQRDGHCHALLESPTGTGKSL 78
Query: 70 SLLCSTLAWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTA 129
SLLCS LAWQQN K + N+SHSK EA TDPL +GGGFIPE+QPS P STN + A
Sbjct: 79 SLLCSVLAWQQNYKSRLLKGNLSHSKAAPEAATDPLNHGGGFIPETQPSDTPASTNVEKA 138
Query: 130 QVAMNNKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVL-------------- 175
+ A K+ PTI+YASRTHSQI+QVI EY+KT YRVPMAVL
Sbjct: 139 ETATK----KRTKIPTIYYASRTHSQITQVIREYRKTGYRVPMAVLVCLIDFALLCGLAY 194
Query: 176 -------------------ASRKHYCTNKYVRDKENIDEECKLLLGDR-NLGCPQFKNVH 215
ASRKHYCTN++V K+N+D+EC+LLL D+ N+ C +FKNV+
Sbjct: 195 FMVNQDQISYLTGPSSLCKASRKHYCTNRHVLGKDNVDDECRLLLKDKANIQCSEFKNVN 254
Query: 216 KVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIR 275
K+ HPSLQ G +EVHDIEDLV VG+ VRGC Y+A+ SMA++AQLVFCPYSYI+NPVIR
Sbjct: 255 KITSHPSLQPRGHNEVHDIEDLVKVGKNVRGCPYFASWSMAENAQLVFCPYSYIVNPVIR 314
Query: 276 GAMEVDIKGAILILDEAH------------------NIEDIARDAGSVDIDEDVLLKLQM 317
+EVD+KGAI+I DEAH N+EDIAR+A +LQ
Sbjct: 315 AGVEVDLKGAIIIFDEAHMLLMLMIRPSTKSFTVHSNMEDIAREA-----------ELQN 363
Query: 318 ELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRELQEANI 377
ELEQ+ PMIYQPL E+ + L+ WI R+K +LAKR+FQH+FS WTGDKALREL+E+NI
Sbjct: 364 ELEQMSVAQPMIYQPLCEVVEGLISWIGRKKDSLAKRDFQHYFSSWTGDKALRELEESNI 423
Query: 378 SRQCFPILLECATKAIKEA--TDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDY 435
+R+CFPILLEC TKAI+ + + ES++ +LSG+SV+TLE LFSSLTYFFSRNGSH+ DY
Sbjct: 424 TRECFPILLECFTKAIRTSKEAEMESDMLYLSGISVLTLEELFSSLTYFFSRNGSHILDY 483
Query: 436 QLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSE 495
QL LQ+ KR +P G WTHT SLWC+NPAVVFKD+A++SLS+ILTSGTLSPMNSFSSE
Sbjct: 484 QLGLQRSTKRG--DPSGTWTHTFSLWCMNPAVVFKDLADISLSVILTSGTLSPMNSFSSE 541
Query: 496 LGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTADG---------------- 539
LG+QFGT LEAPHVID ++QV IS GP NYPLNASYKTAD
Sbjct: 542 LGMQFGTSLEAPHVIDPNMQVWAGAISNGPSNYPLNASYKTADAYSFQDALGKSLEEICT 601
Query: 540 ------------YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNS 587
YKLMEKLC RWRET QWSRL KK LFVEP+GG+Q++F+ VLK YY+S
Sbjct: 602 IVPGGSLVFFPSYKLMEKLCMRWRETEQWSRLCLKKDLFVEPRGGAQDEFDSVLKGYYDS 661
Query: 588 ISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVV-----GIPFPN 642
I +G + R +R K+ G T ++ +KKGA+FLAVCRGK ++ GI F +
Sbjct: 662 I-RGKNKIIGRNRRAKKAGPIKTET----QDDSKKGAAFLAVCRGKSMLLQVSEGIDFAD 716
Query: 643 INDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDER 702
N V A+RALNQA GRCIRHRFDYGAII LDER
Sbjct: 717 DNARAV--------------------------AYRALNQAAGRCIRHRFDYGAIIFLDER 750
Query: 703 FQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFRDVKGWVGKKMFNGLENSDNDVDHV 762
++E+RNRA ISKWLR+SIK YD+F+AS+EGL+SFF VK V KM E+S +
Sbjct: 751 YKEQRNRASISKWLRQSIKVYDNFEASMEGLRSFFNSVKEQVDSKMLGSQEDSVE--KNF 808
Query: 763 SSMDQCKEVTKQNTQELNKSDHSGQNVQSISKYDPFSH 800
SS Q KE ++ Q NKS V+ + +P H
Sbjct: 809 SSEKQSKEFRRKENQIQNKSSQVEPKVEDYTNSNPKYH 846
Score = 263 bits (672), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 201/535 (37%), Positives = 287/535 (53%), Gaps = 68/535 (12%)
Query: 777 QELNKSDHSGQNVQSISKYDPFSHQKSQGNFEVQTSLQTDQNNSCIEYIDLERMN----- 831
++ N++ S QSI YD NFE NS E +D + +
Sbjct: 753 EQRNRASISKWLRQSIKVYD---------NFEASMEGLRSFFNSVKEQVDSKMLGSQEDS 803
Query: 832 -DKNNHSIDSSKGSTRKENK----------KLNSYDNSGQKLHSSVKYDSFPGLN----- 875
+KN S SK RKEN+ K+ Y NS K H + +F G +
Sbjct: 804 VEKNFSSEKQSKEFRRKENQIQNKSSQVEPKVEDYTNSNPKYHFMYESKAF-GYHRDVKP 862
Query: 876 -LLDEVE-----VQEFVQL-DRVSSCKDYINTQCSLQKSSRCCEASSMPFSNEDPELLLV 928
+ +++ Q FVQ+ + C++ I+ +C +Q CE SS+ +E PE V
Sbjct: 863 KIAEDLRSMGHSAQTFVQVKEEAECCREVIDLECGVQPDLGYCEVSSVTNCDEAPETSFV 922
Query: 929 KETPAMDDNNTMASPGSLSKDGNSS-STIFQASTQSPDQLSVHSQSLTNPVRVPSSAQPE 987
+ET M + ++ASP S S + +SS +T+ S SPDQL S N + P +
Sbjct: 923 QETSGMINGISVASPCSCSMNESSSPATVGLRSPGSPDQLLKQHISTPNFRKSPLGTESS 982
Query: 988 MVVTPEKEVTGDTSNLPPERDSSLSSSVNSHTQKRRKTMVSPSVDLMLMAS--------- 1038
+V T E+ G T +L E +SS + SVNS KRRK SP +DL + S
Sbjct: 983 VVATSERYSFGGTRSLTLEAESSFNMSVNSQALKRRKFTSSPVIDLEVENSDAPRPSTRP 1042
Query: 1039 ---REANRRIEFNSETNYVKNKSKTSNNCAESHLSSTPVMDKTLQISCSLCRSPLGLPEN 1095
RRIEF + + +S+ N + S P +++ +Q+SCSLCRSPLGLPEN
Sbjct: 1043 SDHTSLTRRIEFG----FTEPRSQNYN------IYSFPEVNQKVQLSCSLCRSPLGLPEN 1092
Query: 1096 HLYVRCSVTSSAKAHLVSLLK--QRQELCANVTSIPVIMTDISSVDQLLTNQSFGGASGQ 1153
H YV C +TSS+K +L+SLLK R TS+ +IMTD S V+Q L + F G GQ
Sbjct: 1093 HSYVNCLLTSSSKKYLLSLLKKTSRTGAAEMSTSVSIIMTDCSMVNQRLCRK-FEGLKGQ 1151
Query: 1154 GIWCEEDGCVYNTLFCPFCSSPSNCLGVQIVASNALNFQLLNKILFYLDRLEIRIPESGK 1213
GIWCE+DGCV+NT++CPFCS P+ CLGVQ++A+++ N Q L+KILF+ D LE+ E+
Sbjct: 1152 GIWCEQDGCVFNTIYCPFCSIPNTCLGVQVMATDSSNVQFLSKILFFADHLEV-TNEAAS 1210
Query: 1214 FKSEAKDSSPI--THSAMDKVAAFSCIEKFSYSP-ILEDSGGWRSTKSKLRLPKK 1265
S K P+ T++A+DK I++F+YSP ++SGGWR+TKSKLRLPK+
Sbjct: 1211 KDSTLKHKEPLAETNAAVDKSDVLKSIDRFAYSPNQQQESGGWRTTKSKLRLPKR 1265
>gi|297850494|ref|XP_002893128.1| hypothetical protein ARALYDRAFT_472311 [Arabidopsis lyrata subsp.
lyrata]
gi|297338970|gb|EFH69387.1| hypothetical protein ARALYDRAFT_472311 [Arabidopsis lyrata subsp.
lyrata]
Length = 1138
Score = 887 bits (2293), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/803 (55%), Positives = 565/803 (70%), Gaps = 97/803 (12%)
Query: 10 NYRKPLNAYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSL 69
N + P N Y +GG+QVEFPYQPYG+QL FM RVISTLDRAQRDGH HALLESPTGTGKSL
Sbjct: 19 NSKNPKNVYQIGGLQVEFPYQPYGTQLAFMSRVISTLDRAQRDGHSHALLESPTGTGKSL 78
Query: 70 SLLCSTLAWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTA 129
SLLCS LAWQ++ K + N++HS+ + PS S N +
Sbjct: 79 SLLCSVLAWQKSYKSRFPNGNLTHSR-------------------THPSDNAASCNVEPP 119
Query: 130 QVAMNNKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRD 189
+ A+ PTI+YASRTH+QI+QVI EY+KT YRVPM VL SRK YCTN +V+
Sbjct: 120 EPAI----------PTIYYASRTHAQITQVIREYRKTGYRVPMTVLGSRKRYCTNSHVQG 169
Query: 190 KENIDEECKLLLGDR-NLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCS 248
KEN+DE+C+LLL D+ N+ C +FK V ++ +PSLQ+ G + VHDIEDLV +G+ V GC
Sbjct: 170 KENVDEKCRLLLKDKKNIKCAEFKGVGQILAYPSLQQNGHNGVHDIEDLVKIGKTVTGCP 229
Query: 249 YYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDID 308
Y+A+ M + AQLVFCPYSYII+PVIRG V+++GAI+I DEAHN+EDIAR+AGS++++
Sbjct: 230 YFASWKMLEVAQLVFCPYSYIIDPVIRGG--VNLQGAIIIFDEAHNMEDIAREAGSINME 287
Query: 309 EDVLLKLQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKA 368
ED+L KL+ ELEQV P IY+ L + + L+ WI R+K +L KR+ +H+FS WTGD+A
Sbjct: 288 EDILFKLKNELEQVSENEPEIYESLYIVVEGLISWIGRKKDSLVKRDSEHYFSNWTGDRA 347
Query: 369 LRELQEANISRQCFPILLECATKAI--KEATDTESELPHLSGMSVITLEGLFSSLTYFFS 426
L+EL+E NI+ + FP L C +AI EA++ + + P+LSG+SV TLE LF++LTYFFS
Sbjct: 348 LKELKEFNITPENFPNLEACFNQAITKSEASEMDPDKPYLSGISVSTLEELFATLTYFFS 407
Query: 427 RNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTL 486
RNGSHV DY++ LQ+ KR +++ G WTHT SLWC+NP+VVFKD+A+LSLSIILTSGTL
Sbjct: 408 RNGSHVLDYEMGLQRSAKRGTRDNG--WTHTFSLWCMNPSVVFKDLADLSLSIILTSGTL 465
Query: 487 SPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTADG------- 539
SPMNSFSSELG+QFGTCLEAPHVID ++QV IS+GP N+PLNASYKTAD
Sbjct: 466 SPMNSFSSELGMQFGTCLEAPHVIDPNMQVWAGAISSGPGNFPLNASYKTADAYAFQDAL 525
Query: 540 ---------------------YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFE 578
YKLMEKLC RW ETGQWSRL K+ F+EP+GG+++DFE
Sbjct: 526 GKSLEEICSIVPGGSLVFFPSYKLMEKLCTRWHETGQWSRLCLKRDFFIEPRGGAKDDFE 585
Query: 579 IVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGK----- 633
VLK YY+SIS G+ + R RVK+ G + I ++ +K+G++FLAVCRGK
Sbjct: 586 TVLKEYYDSIS-GNNRSNGRNSRVKKAG----SVITEAQDDSKRGSAFLAVCRGKVSEGL 640
Query: 634 ----------IVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAI 683
I+VGIPFPN+ DI V LK+KYNDT +SSK LL G+EWYC QA+RALNQA
Sbjct: 641 DFSDDNARAVIIVGIPFPNLGDILVELKRKYNDTNKSSKKLLGGSEWYCQQAYRALNQAA 700
Query: 684 GRCIRHRFDYGAIILL-------------DERFQEERNRAHISKWLRKSIKQYDSFDASL 730
GRCIRHRFDYGAII L DER+++ RNRA ISKWLR+SIK YD+F+AS+
Sbjct: 701 GRCIRHRFDYGAIIFLVMIDLRLSCFGVPDERYRQPRNRASISKWLRQSIKVYDNFEASM 760
Query: 731 EGLKSFFRDVKGWVGKKMFNGLE 753
EGL+ FF VK V K+ E
Sbjct: 761 EGLRYFFNSVKETVDSKILESHE 783
Score = 183 bits (464), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 124/291 (42%), Positives = 168/291 (57%), Gaps = 24/291 (8%)
Query: 919 SNEDPELLLVKETPAMDDNNTMASPGSLSKDGNSSSTIFQASTQSPDQLSVHSQSLTNPV 978
SN DPE KET + + ASP S SK+ +SS S +SPDQ S +N
Sbjct: 792 SNADPE----KETSGI----SAASPCSSSKNESSSLETGLRSLRSPDQFLKRHVSTSNFG 843
Query: 979 RVPSSAQPEMVVTPEKEVTGDTSNLPPERDSSLSSSVNSHTQKRRKTMVSPSV-DLMLMA 1037
R P A+ ++VTPE+ GDT + E +S L+ SVNSH KRRK SP + DL
Sbjct: 844 RPPLGAESSVIVTPERYSIGDTRSSILEAESPLNMSVNSHALKRRKFTTSPIIIDLEEEN 903
Query: 1038 SREANRRIEFNSETNYVKNKSKTSNNCAESHLSSTPVMDKTLQISCSLCRSPLGLPENHL 1097
S + R E T + + V + ++ISCSLCRS LG PENH
Sbjct: 904 SNSPDTRPE--DHTRFTR----------RIEFGFPEVDQRVMRISCSLCRSSLGHPENHS 951
Query: 1098 YVRCSVTSSAKAHLVSLLKQRQELCAN--VTSIPVIMTDISSVDQLLTNQSFGGASGQGI 1155
Y +C +TSS+K +L+SLLK+ + + TS+ VIMTD S V+Q L S + GQGI
Sbjct: 952 YPKCLLTSSSKMYLLSLLKETSGIGSAEMPTSVSVIMTDCSLVNQRLCRSS-EISKGQGI 1010
Query: 1156 WCEEDGCVYNTLFCPFCSSPSNCLGVQIVASNALNFQLLNKILFYLDRLEI 1206
W E+DGCV+ T+FCPFCS P+ CLGVQ++A+++ N Q ++KILF+ D LE+
Sbjct: 1011 WSEQDGCVFKTIFCPFCSVPNTCLGVQVMATDSSNAQFMSKILFFADHLEV 1061
>gi|50726319|dbj|BAD33894.1| putative BRCA1 interacting protein C-terminal helicase 1 [Oryza
sativa Japonica Group]
Length = 1366
Score = 852 bits (2201), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 542/1361 (39%), Positives = 758/1361 (55%), Gaps = 223/1361 (16%)
Query: 18 YHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLA 77
Y VGG+ VEFPY+PYG+QL FM RVI+TLDRA+R G HALLESPTGTGKSLSLLCS LA
Sbjct: 25 YQVGGVPVEFPYKPYGTQLAFMGRVIATLDRARRQGRSHALLESPTGTGKSLSLLCSALA 84
Query: 78 WQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKN 137
WQ++ L+ A +GGGF+P+ P + K
Sbjct: 85 WQRHYPLRAPPAAAPDP----------FLHGGGFVPDDTQKQATP---------GVPEKA 125
Query: 138 VKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEEC 197
+KK PTI+YA+RTH+QI+QV+ EY+KT+YRV MA+LASRKHYC NK V NIDE C
Sbjct: 126 TRKKNVPTIYYATRTHAQITQVVREYRKTSYRVRMAILASRKHYCVNKNVCMSGNIDELC 185
Query: 198 KLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMAD 257
K LL D GCP++KN K+ HPSLQ GGC+EVHDIEDLV VG+ V+GC Y+AA++MA+
Sbjct: 186 KSLLDDSAQGCPEYKNAQKLSRHPSLQIGGCYEVHDIEDLVRVGRKVKGCPYFAAQTMAE 245
Query: 258 DAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQM 317
AQLVFCPY+Y+I+P++R AM++DI+G+I++LDEAHNIEDIARDAGS D+DE+ LL L+
Sbjct: 246 AAQLVFCPYNYLISPIVRRAMDIDIRGSIIVLDEAHNIEDIARDAGSFDVDEESLLFLRQ 305
Query: 318 ELEQVCSVNPM--IYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRELQEA 375
ELE + + + IY+PL E+ Q L GWI+ + L K EF+H S WTG++A++EL+ A
Sbjct: 306 ELEGLVTDEAVAKIYEPLHEVIQGLNGWIDEQGNNLQKNEFEHPASFWTGEEAMKELKYA 365
Query: 376 NISRQCFPILLECATKAIKEATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDY 435
I+ FP+L ECATKAIK A+D ESE HLSG S +TLE LFSSL+YFF+ NG H +DY
Sbjct: 366 GITPVNFPVLQECATKAIKAASDAESEGVHLSGGSAMTLESLFSSLSYFFAENGRHSNDY 425
Query: 436 QLALQKYIKRDSKNPGG-------------NWTHTLSLWCLNPAVVFKDVAELSLSIILT 482
QLALQ++ KR+ N W +SLWCLNPAVVF+D+A+L+LS+ILT
Sbjct: 426 QLALQRFAKREGANVMSYDLIICNSVTSFIGWKCVMSLWCLNPAVVFRDIADLTLSVILT 485
Query: 483 SGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTAD---- 538
SGTLSPM SF+SELGVQF C+EAPHVI+ D QV +V+S+GP LNASY+TA+
Sbjct: 486 SGTLSPMGSFASELGVQFEACMEAPHVINADSQVFATVLSSGPTGRRLNASYRTANEYSF 545
Query: 539 ------------------------GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQ 574
Y L+EKL RW +T EP+ GS
Sbjct: 546 QDELGATLEEICRVVPGGALVFFPSYNLLEKLQRRWSQT--------------EPR-GST 590
Query: 575 EDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKI 634
E+ E VLK YYN+I G + K+ N + SQE+A K GA+FLAVCRGK+
Sbjct: 591 EELEPVLKGYYNAI-LGKAPPKKGRGGAKQIVKNRVTKDSSQESA-KGGAAFLAVCRGKV 648
Query: 635 VVGIPFPN---------------------INDIQVSLKKKYNDTYRSSKNLLSGNEWYCN 673
GI F + IND+QV LKK+YND+Y+SSK+LLSGNEWYC+
Sbjct: 649 SEGIDFSDDKARVVVSFVFSSYVFYAPERINDVQVKLKKRYNDSYKSSKDLLSGNEWYCH 708
Query: 674 QAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGL 733
QAFRALNQA GRCIRH+FDYG IIL+DER+QEERN +ISKWLR SI+ +F +++GL
Sbjct: 709 QAFRALNQAAGRCIRHKFDYGGIILIDERYQEERNIVYISKWLRNSIRNCGTFQETMDGL 768
Query: 734 KSFFRDVKGWVGKKMFNGLENSDNDVDHVSSMDQCKEVTKQNTQELNKSDHSGQNVQSIS 793
FF++ + + K G+ D +D C ++ + ++L
Sbjct: 769 TRFFQNAEEQIKIKA-QGVSPKDR-------LDACVLPSQGDKRKL-------------- 806
Query: 794 KYDPFSHQKSQGNFEVQTSLQTDQNNSCIEYID---LERM-----NDKNNHSIDSSKGST 845
P+ + NF QT LQ +++ +ID ++RM + ++ H G
Sbjct: 807 ---PW----PEPNFSNQTVLQNNKDVKSESHIDGAGVDRMKLSDTSSESWHLSSKHSGLV 859
Query: 846 RK------ENKKLNSYDNSGQKLHSSVKYDSFPGLNLLDEVEVQEFVQLDRVSSCKDYIN 899
+K EN + K+ +++ ++ G N EV + F+ L+ + Y+
Sbjct: 860 KKQISPEPENVPMACQLPPSYKVQYNLEGEADNGTNY--EVNIN-FIDLEECDTKPRYVK 916
Query: 900 TQCSLQKSSRCCEASSMPFSNEDPELLLVKETPAMDDNNT---MASPGSLSKDGNSSSTI 956
+ +P + +++ M++ +ASP +++G ++ST+
Sbjct: 917 ------------------LTIFNPSEHITQQSTVMEETYAEVPIASPS--NRNGENASTV 956
Query: 957 FQASTQSPDQLSVHSQSLTNPVRVPSSAQPEMVVTPEKEVTGDTSNLPPERDSSLSSSVN 1016
D S + N V +SA TPE+ +G S+L E +S + SVN
Sbjct: 957 MNEGDPVLDLPISLSAANRNISCVSTSA-----ATPER--SGSISHL--EHESWTNRSVN 1007
Query: 1017 SHTQKRRKTMVSPSVDLMLMASREANRRIEF---NSETNYVKNKSKTSNNCAE------- 1066
SH QKRRK +S + R + + + + + +T C +
Sbjct: 1008 SHCQKRRK--LSSPMSCCTYTERSCSPSKPYLHGGCDVSMLPGDLRTDGMCCKSMKMSRC 1065
Query: 1067 --------SHLSSTPVMDKT---LQISCSLCRSPLGLPENHLYVRCSVTSSAKAHLVSL- 1114
S L+ P + T L I C+ C++ LGL E+ V CS + S+K +L L
Sbjct: 1066 ENVKVERNSKLAEFPSRESTQEKLFICCARCKTALGLQEDGFLVSCSSSLSSKFYLTYLW 1125
Query: 1115 --------LKQRQELCANVTSIPVIMTDISSVDQL----LTNQSFGGASGQGIWCEEDGC 1162
L + L + I V++ ++SSV+++ L+N+ G A W E+DGC
Sbjct: 1126 RHGPSADILPGKDFLASPPLKIKVMVCNVSSVNKMMLGNLSNE--GSAHNSSFWSEKDGC 1183
Query: 1163 VYNTLFCPFCSSPSNC---LGVQIVASNALNFQLLNKILFYLDRLEIRIPESGKFKSEAK 1219
VY + C CS + C LG Q+VA+++ N Q +K++ + D L ++ G K +A
Sbjct: 1184 VYKPVTCQTCSCKNACVTTLGAQVVATDSSNQQFCDKVILFDDLLHVK---HGPSKDQAL 1240
Query: 1220 DSSPITHSAMDKVAAFSCIEKFSYSPILEDSGGWRSTKSKL 1260
S+PI +E F+Y P+ +D + +SK
Sbjct: 1241 -SAPIGTVKPISPPPVIDLESFAYKPLKKDPVPVNTRRSKF 1280
>gi|218202591|gb|EEC85018.1| hypothetical protein OsI_32311 [Oryza sativa Indica Group]
Length = 1265
Score = 851 bits (2199), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 544/1347 (40%), Positives = 758/1347 (56%), Gaps = 205/1347 (15%)
Query: 39 MCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCKLKNQLANISHSKPDT 98
M RVI+TLDRA+R G HALLESPTGTGKSLSLLCS LAWQ++ L+ A
Sbjct: 1 MGRVIATLDRARRQGRSHALLESPTGTGKSLSLLCSALAWQRHYPLRAPPAA------AA 54
Query: 99 EAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKKMTPTIFYASRTHSQISQ 158
A DP +GGGF+P+ P + K +KK PTI+YA+RTH+QI+Q
Sbjct: 55 AAAPDPFLHGGGFVPDDTQKQATP---------GVPEKATRKKNVPTIYYATRTHAQITQ 105
Query: 159 VISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEECKLLLGDRNLGCPQFKNVHKVR 218
V+ EY+KT+YRV MA+LASRKHYC NK V NIDE CK LL D GCP++KN K+
Sbjct: 106 VVREYRKTSYRVRMAILASRKHYCVNKNVCMSGNIDELCKSLLDDSAQGCPEYKNAQKLS 165
Query: 219 GHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAM 278
HPSLQ GGC+EVHDIEDL+ VG+ V+GC Y+AA++MA+ AQLVFCPY+Y+I+P++R AM
Sbjct: 166 RHPSLQIGGCYEVHDIEDLIRVGRKVKGCPYFAAQTMAEAAQLVFCPYNYLISPIVRRAM 225
Query: 279 EVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQVCSVNPM--IYQPLIEM 336
++DI+G+I++LDEAHNIEDIARDAGS D+DE+ LL L+ ELE + + + IY+PL E+
Sbjct: 226 DIDIRGSIIVLDEAHNIEDIARDAGSFDVDEESLLFLRQELEGLVTDEAVAKIYEPLHEV 285
Query: 337 TQDLVGWIERRKATLAKREFQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEA 396
Q L GWI+ + L K EF+H S WTG++A++EL+ A I+ FP+L ECATKAIK A
Sbjct: 286 IQGLNGWIDEQGNNLQKNEFEHPASFWTGEEAMKELKYAGITPVNFPVLQECATKAIKAA 345
Query: 397 TDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGG---- 452
+D ESE HLSG S +TLE LFSSL+YFF+ NG H +DYQLALQ++ K + N
Sbjct: 346 SDAESEGVHLSGGSAMTLESLFSSLSYFFAENGRHSNDYQLALQRFAKCEGANMMSYDLI 405
Query: 453 ---------NWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTC 503
W +SLWCLNPAVVF+D+A+L+LS+ILTSGTLSPM SF+SELGVQF C
Sbjct: 406 ICNSVTSFIGWKCVMSLWCLNPAVVFRDIADLTLSVILTSGTLSPMGSFASELGVQFEAC 465
Query: 504 LEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTAD------------------------- 538
+EAPHVI+ D QV +V+S+GP LNASY+TA+
Sbjct: 466 MEAPHVINADSQVFATVLSSGPTGRRLNASYRTANEYSFQDELGATLEEICRVVPGGALV 525
Query: 539 ---GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCA 595
Y L+EKL RW +TGQW+RL A+K + VEP+ GS E+ E VLK YYN+I G
Sbjct: 526 FFPSYNLLEKLQRRWYQTGQWARLEAQKHVCVEPR-GSTEELEPVLKGYYNAI-LGKVPP 583
Query: 596 VVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPN------------- 642
+ K+ N + SQE+A K GA+FLAVCRGK+ GI F +
Sbjct: 584 KKGRGGAKQIVKNRVTKDSSQESA-KGGAAFLAVCRGKVSEGIDFSDDKARVVVSFVFSS 642
Query: 643 --------INDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYG 694
IND+QV LKK+YND+Y+SSK+LLSGNEWYC+QAFRALNQA GRCIRH+FDYG
Sbjct: 643 YVFYAPERINDVQVKLKKRYNDSYKSSKDLLSGNEWYCHQAFRALNQAAGRCIRHKFDYG 702
Query: 695 AIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFRDVKGWVGKKMFNGLEN 754
IIL+DER+QEERN +ISKWLR SI+ +F +++GL FF++ + + K G+
Sbjct: 703 GIILIDERYQEERNIVYISKWLRNSIRNCGTFQETMDGLTRFFQNAEEQIKIKA-QGVSP 761
Query: 755 SDNDVDHVSSMDQCKEVTKQNTQELNKSDHSGQNVQSISKYDPFSHQKSQGNFEVQTSLQ 814
D +D C ++ + ++L P+ + NF QT LQ
Sbjct: 762 KDR-------LDACVLPSQGDKRKL-----------------PW----PEPNFSNQTVLQ 793
Query: 815 TDQNNSCIEYID---LERM-----NDKNNHSIDSSKGSTRK------ENKKLNSYDNSGQ 860
+++ +ID ++RM + ++ H G +K EN +
Sbjct: 794 NNKDVKSESHIDGAGVDRMKLSDTSSESWHFSSKHSGLVKKQISPEPENVPMACQLPPSY 853
Query: 861 KLHSSVKYDSFPGLNLLDEVEVQEFVQLDRVSSCKDYINTQCSLQKSSRCCEASSMPFSN 920
K+ +++ ++ G N EV + F+ L+ + Y +
Sbjct: 854 KVQYNLEGEADNGTNY--EVNIN-FIDLEECDTKPRYAK------------------LTI 892
Query: 921 EDPELLLVKETPAMDDNNT---MASPGSLSKDGNSSSTIFQASTQSPDQLSVHSQSLTNP 977
+P + +++ M++ +ASP +++G ++ST+ D S + N
Sbjct: 893 FNPSEHITQQSTVMEETYAEVPIASPS--NRNGENASTVMNEGDLVLDLPISLSAANRNI 950
Query: 978 VRVPSSAQPEMVVTPEKEVTGDTSNLPPERDSSLSSSVNSHTQKRRKTMVSPSVDLMLMA 1037
V +SA TPE+ +G S+L E +S + SVNSH QKRRK +S +
Sbjct: 951 SCVSTSA-----ATPER--SGSISHL--EHESWTNRSVNSHCQKRRK--LSSPMSCCTYT 999
Query: 1038 SREANRRIEF------------NSETNYVKNKSKTSNNCA------ESHLSSTPVMDKT- 1078
R + + + T+ V KS + C S L+ P + T
Sbjct: 1000 ERSCSPSKPYLHGGCDVSMLPGDLRTDGVCCKSMKMSRCENVKVERNSKLAEFPSRESTQ 1059
Query: 1079 --LQISCSLCRSPLGLPENHLYVRCSVTSSAKAHLVSL---------LKQRQELCANVTS 1127
L I C+ C++ LGL E+ V CS + S+K +L L L + L +
Sbjct: 1060 EKLFICCARCKTALGLQEDGFLVSCSSSLSSKFYLTYLWRHGPSADILPGKDFLASPPLK 1119
Query: 1128 IPVIMTDISSVDQL----LTNQSFGGASGQGIWCEEDGCVYNTLFCPFCSSPSNC---LG 1180
I V++ ++SSV+++ L+N+ G A W E+DGCVY + C CS + C LG
Sbjct: 1120 IKVMVCNVSSVNKMMLGNLSNE--GSAHNSSFWSEKDGCVYKPVTCQTCSCKNACVTTLG 1177
Query: 1181 VQIVASNALNFQLLNKILFYLDRLEIRIPESGKFKSEAKDSSPITHSAMDKVAAFSCIEK 1240
Q+VA+++ N Q +K+L + D L ++ G K +A S+PI +E
Sbjct: 1178 AQVVATDSSNQQFCDKVLLFDDLLHVK---HGPSKDQAA-SAPIGTVKPISPPPVIDLES 1233
Query: 1241 FSYSPILEDSGGWRSTKSKLRLPKKGR 1267
F+Y P+ +D + +SKLRLP +
Sbjct: 1234 FAYKPLKKDPVPVNTRRSKLRLPGTAK 1260
>gi|222642047|gb|EEE70179.1| hypothetical protein OsJ_30256 [Oryza sativa Japonica Group]
Length = 1456
Score = 843 bits (2179), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 537/1347 (39%), Positives = 755/1347 (56%), Gaps = 209/1347 (15%)
Query: 39 MCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCKLKNQLANISHSKPDT 98
M RVI+TLDRA+R G HALLESPTGTGKSLSLLCS LAWQ++ L+ A
Sbjct: 1 MGRVIATLDRARRQGRSHALLESPTGTGKSLSLLCSALAWQRHYPLRAPPAAAPDP---- 56
Query: 99 EAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKKMTPTIFYASRTHSQISQ 158
+GGGF+P+ P + K +KK PTI+YA+RTH+QI+Q
Sbjct: 57 ------FLHGGGFVPDDTQKQATP---------GVPEKATRKKNVPTIYYATRTHAQITQ 101
Query: 159 VISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEECKLLLGDRNLGCPQFKNVHKVR 218
V+ EY+KT+YRV MA+LASRKHYC NK V NIDE CK LL D GCP++KN K+
Sbjct: 102 VVREYRKTSYRVRMAILASRKHYCVNKNVCMSGNIDELCKSLLDDSAQGCPEYKNAQKLS 161
Query: 219 GHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAM 278
HPSLQ GGC+EVHDIEDLV VG+ V+GC Y+AA++MA+ AQLVFCPY+Y+I+P++R AM
Sbjct: 162 RHPSLQIGGCYEVHDIEDLVRVGRKVKGCPYFAAQTMAEAAQLVFCPYNYLISPIVRRAM 221
Query: 279 EVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQVCSVNPM--IYQPLIEM 336
++DI+G+I++LDEAHNIEDIARDAGS D+DE+ LL L+ ELE + + + IY+PL E+
Sbjct: 222 DIDIRGSIIVLDEAHNIEDIARDAGSFDVDEESLLFLRQELEGLVTDEAVAKIYEPLHEV 281
Query: 337 TQDLVGWIERRKATLAKREFQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEA 396
Q L GWI+ + L K EF+H S WTG++A++EL+ A I+ FP+L ECATKAIK A
Sbjct: 282 IQGLNGWIDEQGNNLQKNEFEHPASFWTGEEAMKELKYAGITPVNFPVLQECATKAIKAA 341
Query: 397 TDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGG---- 452
+D ESE HLSG S +TLE LFSSL+YFF+ NG H +DYQLALQ++ KR+ N
Sbjct: 342 SDAESEGVHLSGGSAMTLESLFSSLSYFFAENGRHSNDYQLALQRFAKREGANVMSYDLI 401
Query: 453 ---------NWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTC 503
W +SLWCLNPAVVF+D+A+L+LS+ILTSGTLSPM SF+SELGVQF C
Sbjct: 402 ICNSVTSFIGWKCVMSLWCLNPAVVFRDIADLTLSVILTSGTLSPMGSFASELGVQFEAC 461
Query: 504 LEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTAD------------------------- 538
+EAPHVI+ D QV +V+S+GP LNASY+TA+
Sbjct: 462 MEAPHVINADSQVFATVLSSGPTGRRLNASYRTANEYSFQDELGATLEEICRVVPGGALV 521
Query: 539 ---GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCA 595
Y L+EKL RW +TGQW+RL A+K + VEP+ GS E+ E VLK YYN+I G
Sbjct: 522 FFPSYNLLEKLQRRWSQTGQWARLEAQKHVCVEPR-GSTEELEPVLKGYYNAI-LGKAPP 579
Query: 596 VVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPN------------- 642
+ K+ N + SQE+A K GA+FLAVCRGK+ GI F +
Sbjct: 580 KKGRGGAKQIVKNRVTKDSSQESA-KGGAAFLAVCRGKVSEGIDFSDDKARVVVSFVFSS 638
Query: 643 --------INDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYG 694
IND+QV LKK+YND+Y+SSK+LLSGNEWYC+QAFRALNQA GRCIRH+FDYG
Sbjct: 639 YVFYAPERINDVQVKLKKRYNDSYKSSKDLLSGNEWYCHQAFRALNQAAGRCIRHKFDYG 698
Query: 695 AIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFRDVKGWVGKKMFNGLEN 754
IIL+DER+QEERN +ISKWLR SI+ +F +++GL FF++ + + K G+
Sbjct: 699 GIILIDERYQEERNIVYISKWLRNSIRNCGTFQETMDGLTRFFQNAEEQIKIKA-QGVSP 757
Query: 755 SDNDVDHVSSMDQCKEVTKQNTQELNKSDHSGQNVQSISKYDPFSHQKSQGNFEVQTSLQ 814
D +D C ++ + ++L P+ + NF QT LQ
Sbjct: 758 KDR-------LDACVLPSQGDKRKL-----------------PW----PEPNFSNQTVLQ 789
Query: 815 TDQNNSCIEYID---LERM-----NDKNNHSIDSSKGSTRK------ENKKLNSYDNSGQ 860
+++ +ID ++RM + ++ H G +K EN +
Sbjct: 790 NNKDVKSESHIDGAGVDRMKLSDTSSESWHLSSKHSGLVKKQISPEPENVPMACQLPPSY 849
Query: 861 KLHSSVKYDSFPGLNLLDEVEVQEFVQLDRVSSCKDYINTQCSLQKSSRCCEASSMPFSN 920
K+ +++ ++ G N EV + F+ L+ + Y+ +
Sbjct: 850 KVQYNLEGEADNGTNY--EVNIN-FIDLEECDTKPRYVK------------------LTI 888
Query: 921 EDPELLLVKETPAMDDNNT---MASPGSLSKDGNSSSTIFQASTQSPDQLSVHSQSLTNP 977
+P + +++ M++ +ASP +++G ++ST+ D S + N
Sbjct: 889 FNPSEHITQQSTVMEETYAEVPIASPS--NRNGENASTVMNEGDPVLDLPISLSAANRNI 946
Query: 978 VRVPSSAQPEMVVTPEKEVTGDTSNLPPERDSSLSSSVNSHTQKRRKTMVSPSVDLMLMA 1037
V +SA TPE+ +G S+L E +S + SVNSH QKRRK +S +
Sbjct: 947 SCVSTSA-----ATPER--SGSISHL--EHESWTNRSVNSHCQKRRK--LSSPMSCCTYT 995
Query: 1038 SRE---ANRRIEFNSETNYVKNKSKTSNNCAE---------------SHLSSTPVMDKT- 1078
R + + + + + +T C + S L+ P + T
Sbjct: 996 ERSCSPSKPYLHGGCDVSMLPGDLRTDGMCCKSMKMSRCENVKVERNSKLAEFPSRESTQ 1055
Query: 1079 --LQISCSLCRSPLGLPENHLYVRCSVTSSAKAHLVSL---------LKQRQELCANVTS 1127
L I C+ C++ LGL E+ V CS + S+K +L L L + L +
Sbjct: 1056 EKLFICCARCKTALGLQEDGFLVSCSSSLSSKFYLTYLWRHGPSADILPGKDFLASPPLK 1115
Query: 1128 IPVIMTDISSVDQL----LTNQSFGGASGQGIWCEEDGCVYNTLFCPFCSSPSNC---LG 1180
I V++ ++SSV+++ L+N+ G A W E+DGCVY + C CS + C LG
Sbjct: 1116 IKVMVCNVSSVNKMMLGNLSNE--GSAHNSSFWSEKDGCVYKPVTCQTCSCKNACVTTLG 1173
Query: 1181 VQIVASNALNFQLLNKILFYLDRLEIRIPESGKFKSEAKDSSPITHSAMDKVAAFSCIEK 1240
Q+VA+++ N Q +K++ + D L ++ G K +A S+PI +E
Sbjct: 1174 AQVVATDSSNQQFCDKVILFDDLLHVK---HGPSKDQAL-SAPIGTVKPISPPPVIDLES 1229
Query: 1241 FSYSPILEDSGGWRSTKSKLRLPKKGR 1267
F+Y P+ +D + +SK +P + R
Sbjct: 1230 FAYKPLKKDPVPVNTRRSKDWMPNRRR 1256
>gi|449455724|ref|XP_004145601.1| PREDICTED: regulator of telomere elongation helicase 1 homolog
[Cucumis sativus]
Length = 1027
Score = 790 bits (2041), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/513 (74%), Positives = 433/513 (84%), Gaps = 6/513 (1%)
Query: 4 EANPNPNYRKPLNAYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPT 63
++ PNP Y+ N Y +GGIQVEFP++PYGSQL FM RVISTLDRAQR+GHCHALLESPT
Sbjct: 11 KSKPNPTYQLTKNVYPIGGIQVEFPFRPYGSQLEFMDRVISTLDRAQREGHCHALLESPT 70
Query: 64 GTGKSLSLLCSTLAWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPS 123
GTGKSLSLLCS+LAWQ+N K+KN AN H+K EA TDPL GGGFIPE Q +
Sbjct: 71 GTGKSLSLLCSSLAWQKNYKIKNPDANPCHTKAAPEAATDPLGFGGGFIPEVQ------T 124
Query: 124 TNGQTAQVAMNNKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCT 183
N +++ NNK+ KKK PTI+YASRTHSQISQVI EY+KTAYRVPMAVLASRKH CT
Sbjct: 125 PNTESSLPGPNNKSQKKKTAPTIYYASRTHSQISQVIREYRKTAYRVPMAVLASRKHLCT 184
Query: 184 NKYVRDKENIDEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQV 243
N YVR K+N+DEECKLLL D+ GC +FKN +KV+ HP+LQKGGCHEVHDIEDLV VG+
Sbjct: 185 NPYVRGKDNLDEECKLLLKDQIAGCSEFKNANKVKCHPTLQKGGCHEVHDIEDLVKVGEA 244
Query: 244 VRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAG 303
V+GCSYYAARSMADDAQLVFCPYSYIINPVIRGAM+VDIKGAI+I DEAHNIEDIAR G
Sbjct: 245 VKGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMDVDIKGAIVIFDEAHNIEDIARHGG 304
Query: 304 SVDIDEDVLLKLQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCW 363
SVDI+ED L KLQMELE +C ++ ++YQPL EMTQDL WI++RK TL KREFQH+ +CW
Sbjct: 305 SVDIEEDTLNKLQMELEDLCPIDSLVYQPLYEMTQDLTSWIDQRKTTLQKREFQHYVTCW 364
Query: 364 TGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVITLEGLFSSLTY 423
TG+ A RELQEANI++QCFPILLECATKAIK A+DTES+ HLSG+SVITLEGLFSSLTY
Sbjct: 365 TGNHAQRELQEANITQQCFPILLECATKAIKAASDTESDDAHLSGLSVITLEGLFSSLTY 424
Query: 424 FFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTS 483
FFSRNG H+SDYQLALQ+Y KRD WT TLSLWCLNPAVVF+D+ +LSLS+ILTS
Sbjct: 425 FFSRNGCHMSDYQLALQRYTKRDPGKAYAEWTVTLSLWCLNPAVVFRDIGDLSLSVILTS 484
Query: 484 GTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQV 516
GTLSPMNSFSSELGVQFGT LEAPHVIDV+ QV
Sbjct: 485 GTLSPMNSFSSELGVQFGTSLEAPHVIDVESQV 517
Score = 253 bits (645), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 183/474 (38%), Positives = 257/474 (54%), Gaps = 69/474 (14%)
Query: 828 ERMNDKNNHSIDSSKGSTRKENK--KLNSYDNSGQKLHSSVKYDSFPGLNLLDEVEVQEF 885
E N +N I S+ S+R+ K K + +++ GQK H VK
Sbjct: 586 ELPNSENEEHITSTCPSSRRRMKIGKFDKFNHRGQKAHEDVK------------------ 627
Query: 886 VQLDRVSSCKDYINTQCSLQKSSRCCEASSMPFSNEDPELLLVKETPAMDDNNTMASPGS 945
+C I+ +CS++ +R E SM E P+ +V+ETP +D A+
Sbjct: 628 -------NC--IIDLECSVETETRNHEFLSMNTVLEVPDSPIVQETPCVDI--VGATSPR 676
Query: 946 LSKDGNSSSTIFQASTQSPDQLSVHSQSLTNPVRVPSSAQPEMVVTPEKEVTGDTSNLPP 1005
SKD S+ST+ +A ++ DQLS S L R P +++ M+ TPE+ V+ + +
Sbjct: 677 ESKDERSTSTVIEAYSELSDQLSHQSLPLIKSTRSPLTSETSMLNTPERNVSVNAYSFAQ 736
Query: 1006 ERDSSLSSSVNSHTQKRRKTM-------------VSP--------SVDLMLMASREANRR 1044
+ +SSL+ SVNSHTQKRRK+M P SVD + SR
Sbjct: 737 DTESSLNMSVNSHTQKRRKSMGITITKLAQEEFLTDPKTKNPECNSVDRSSIISRNLTSP 796
Query: 1045 IEFNSETNYVKNKSK--------TSNNCAESHLSSTPVMDKTLQISCSLCRSPLGLPENH 1096
+ N E + KS N+ + +LSS MDK L +SC+LCRSPLG PENH
Sbjct: 797 KDTNYEILLTEKKSNGLNVTQMPKLNDTSPVYLSSGLPMDKKLHLSCALCRSPLGRPENH 856
Query: 1097 LYVRCSVTSSAKAHLVSLLKQR--QELCANVTSIPVIMTDISSVDQLLTNQSFGGASGQG 1154
L + CS T S+K HL+S+ ++R + + SI +I+TDI V+Q L +S SG+G
Sbjct: 857 LNITCSFTVSSKTHLISIYEERFKAQTANSSASIQLIITDILFVNQRLLVRS-SKNSGRG 915
Query: 1155 IWCEEDGCVYNTLFCPFCSSPSNCLGVQIVASNALNFQLLNKILFYLDRLEIR--IPESG 1212
IW EEDGCVYN +FCPFC S NC+GVQI+A++A N LLNK++F++D LEI+ ++G
Sbjct: 916 IWSEEDGCVYNYVFCPFCYS-DNCIGVQIMATDASNIPLLNKVMFFVDCLEIQDLKADTG 974
Query: 1213 KFKSEAKDSSPITHSAMDKVAAFSCIEKFSYSPILEDSGGWRSTKSKLRLPKKG 1266
K S K+ SP++ SA K A IE FSYSP SGGWRSTK K+R +KG
Sbjct: 975 K-ASINKEVSPVSSSAKSKYAVMEPIENFSYSPSPLTSGGWRSTKLKVR--RKG 1025
>gi|334182721|ref|NP_173498.3| RAD3-like DNA-binding helicase protein [Arabidopsis thaliana]
gi|332191897|gb|AEE30018.1| RAD3-like DNA-binding helicase protein [Arabidopsis thaliana]
Length = 1144
Score = 788 bits (2035), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/825 (51%), Positives = 533/825 (64%), Gaps = 132/825 (16%)
Query: 10 NYRKPLNAYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSL 69
N + P N Y +GG+QVEFPYQPYG+QL FM RVISTLDRAQRDGH HALLESPTGTGKSL
Sbjct: 19 NSKNPKNVYQIGGLQVEFPYQPYGTQLAFMSRVISTLDRAQRDGHSHALLESPTGTGKSL 78
Query: 70 SLLCSTLAWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTA 129
SLLCS LAWQ++ K + N+SHSK +QPS I S+N +
Sbjct: 79 SLLCSVLAWQKSYKSRFPNGNLSHSK-------------------TQPSDIAGSSNVEPH 119
Query: 130 QVAMNNKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRD 189
+ + PTI+YASRTH+QI+QVI EY+KT YRVPM VL SRK YCTN +V+
Sbjct: 120 EPQI----------PTIYYASRTHAQITQVIREYRKTGYRVPMTVLGSRKRYCTNSHVQG 169
Query: 190 KENIDEECKLLLGDR-NLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCS 248
KEN+DE+C+LLL D+ N+ C +F V ++ +PSLQ+ G + VHDIEDLV +G+ V G
Sbjct: 170 KENVDEKCRLLLKDKKNIKCAEFNGVGRILAYPSLQQTGHNGVHDIEDLVKIGKTVTG-- 227
Query: 249 YYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDID 308
R + S+ ++ N+EDIAR+AGS++++
Sbjct: 228 ----RLLK----------SFTVH---------------------SNMEDIAREAGSINLE 252
Query: 309 EDVLLKLQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKA 368
ED++ KL+ ELEQ+ V P IY L E+ + L+ WI R+K +LAKR+ H+FS WTGD+A
Sbjct: 253 EDIIFKLKNELEQMSEVEPEIYDSLYEVVEGLISWIGRKKDSLAKRDVDHYFSNWTGDRA 312
Query: 369 LRELQEANISRQCFPILLECATKAI--KEATDTESELPHLSGMSVITLEGLFSSLTYFFS 426
L+EL+E NI+R+ FP L C +AI EA + + + P+LSG+SV TLE LF++LTYFFS
Sbjct: 313 LKELKEFNITRENFPNLKACFNQAITKSEAAEIDPDKPYLSGISVSTLEELFATLTYFFS 372
Query: 427 RNGSHVSDYQLALQKYIKRDSKNPGGN-WTHTLSLWCLNPAVVFKDVAELSLSIILTSGT 485
RNGSHV DY++ LQ+ KR G N WT+T SLWC+NP+VVFKD+A+LSLSIILTSGT
Sbjct: 373 RNGSHVLDYEMGLQRSAKR-----GDNGWTNTFSLWCMNPSVVFKDLADLSLSIILTSGT 427
Query: 486 LSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTADG------ 539
LSPMNSFSSELG+QFGTCLEAPHVID ++QV IST P NYPLNASY+TA+
Sbjct: 428 LSPMNSFSSELGMQFGTCLEAPHVIDPNMQVWAGAISTVPGNYPLNASYRTAEAYAFQDA 487
Query: 540 ----------------------YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDF 577
YKLMEKLC RW ETGQWSRL K LF+EP+GGS++DF
Sbjct: 488 LGKSLEEICTIVPGGSLVFFPSYKLMEKLCTRWHETGQWSRLCLKTDLFIEPRGGSKDDF 547
Query: 578 EIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGK---- 633
E VLK YY+SIS G + R VK+ G + I ++ +K+G++FLAVCRGK
Sbjct: 548 ETVLKEYYDSIS-GKNRLIGRNSSVKKAG----SVITEAQDDSKRGSAFLAVCRGKVSEG 602
Query: 634 -----------IVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQA 682
I+VGIP PN+ DI V LK+KYNDT +SSKNLL G+EWYC QA+RALNQA
Sbjct: 603 MDFSDDNARAVIIVGIPLPNLGDILVELKRKYNDTNKSSKNLLGGSEWYCQQAYRALNQA 662
Query: 683 IGRCIRHRFDYGAIILL---DERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFRD 739
GRCIRHRFDYGAII L R + ++ K + SIK YD+F+AS+EGL+ FF
Sbjct: 663 AGRCIRHRFDYGAIIFLVIVALRLPTTKEQSVYFKVAKASIKVYDNFEASMEGLRYFFSS 722
Query: 740 VKGWVGKKMFNGLENSDNDVDHVSSMDQCKEVTKQNTQELNKSDH 784
VK V KM E ++SS +Q E ++ Q NKS H
Sbjct: 723 VKERVDSKMLESHEQ------NLSSENQRNEFVRKENQTQNKSSH 761
Score = 192 bits (487), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 134/338 (39%), Positives = 181/338 (53%), Gaps = 36/338 (10%)
Query: 880 VEVQEFVQLDR-VSSCKDYINTQCSLQKSSRCCEASSMPFSNEDPELLLVKETPAMDDNN 938
+ F+Q+ R CK I+ C +Q CE SS+ +EDPE V M +
Sbjct: 768 IPAHTFIQVKREAECCKGVIDLDCEVQPEPGYCEESSVTNCDEDPETSFVS---GMINGI 824
Query: 939 TMASPGSLSKDGNSSSTIFQASTQSPDQLSVHSQSLTNPVRVPSSAQPEMVVTPEKEVTG 998
A P S SK +SS S +SPDQ S N R P A E VTPE+ G
Sbjct: 825 ATARPCSSSKYESSSLETGLRSLKSPDQFLKRHVSNANFRRSPLGA--ESSVTPERYSIG 882
Query: 999 DTSNLPPERDSSLSSSVNSHTQKRRKTMVSPSVDLMLMASREANRRIEFNSETNYVKNKS 1058
D N+ E +S L+ SVNSH KRRK SP + I+ E S
Sbjct: 883 DMRNMTLEAESPLNMSVNSHVLKRRKFTTSPII-------------IDLEEEN------S 923
Query: 1059 KTSNNCAESHLSST-------PVMD-KTLQISCSLCRSPLGLPENHLYVRCSVTSSAKAH 1110
+N E H S T P +D + ++ISCSLCRS L PEN+ Y C +TSS+K +
Sbjct: 924 NAPDNRPEDHTSFTRRIEFGFPEVDQRVMRISCSLCRSTLSHPENNSYPICMLTSSSKTY 983
Query: 1111 LVSLLKQRQELCAN--VTSIPVIMTDISSVDQLLTNQSFGGASGQGIWCEEDGCVYNTLF 1168
L+SLLK+ + TS+ VIMTD S V+Q L S ++GQGIWC++DGCV+ T+F
Sbjct: 984 LLSLLKETSGTGSAEMPTSVSVIMTDCSLVNQRLCTNS-ESSNGQGIWCQQDGCVFKTIF 1042
Query: 1169 CPFCSSPSNCLGVQIVASNALNFQLLNKILFYLDRLEI 1206
CPFCS P+ CLG+Q++A+++ N Q ++KILF+ D LE+
Sbjct: 1043 CPFCSVPNTCLGMQVMATDSSNVQFMSKILFFADHLEV 1080
>gi|168030243|ref|XP_001767633.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681162|gb|EDQ67592.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1378
Score = 746 bits (1925), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/831 (45%), Positives = 522/831 (62%), Gaps = 118/831 (14%)
Query: 7 PNPNYRKPLNAYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQ---RDGHCHALLESPT 63
P+P+ R + GI V+FPY+PYG+QL FM +V++ L++++ R +ALLESPT
Sbjct: 4 PHPSLR-------ICGIPVDFPYKPYGTQLAFMGKVLAALEQSRHSHRSCSVNALLESPT 56
Query: 64 GTGKSLSLLCSTLAWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPS 123
G+GK+L+LLC+TLAWQ+ L + A DPL GGGFI + S + P
Sbjct: 57 GSGKTLALLCATLAWQKQFPALPLLPS---------APADPLLAGGGFIVDEPLSVLAPY 107
Query: 124 TNGQTAQVAM----------------NNKNVKKKMTPTIFYASRTHSQISQVISEYKKTA 167
+ + N + K + P I+YASRTH+QI+QVI E +KT
Sbjct: 108 STAELNHYPFSFQTYNARHWLSTGRSNTQKSKNRKVPMIYYASRTHTQITQVIRELRKTK 167
Query: 168 YRVPMAVLASRKHYCTNKYVRDKENIDEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGG 227
Y V MAVL +RKHYCTNK V K N+DE+CKLL+ D CP FKNV K++ HPSLQKGG
Sbjct: 168 YHVSMAVLGARKHYCTNKSVVRKNNVDEDCKLLMKDEERSCPHFKNVMKLKSHPSLQKGG 227
Query: 228 CHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAIL 287
+ +HDIEDLV +G V+GC+Y+AAR++A +A +VFCPY+YI++P+IR AMEV+++GAI+
Sbjct: 228 ANNIHDIEDLVELGHKVKGCAYFAARALATEADIVFCPYNYILDPIIRSAMEVNLQGAIV 287
Query: 288 ILDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQVCSVNPM--IYQPLIEMTQDLVGWIE 345
+LDEAHNIED+AR+AGS+D++ +L L++ELEQ+ + + IY PL+EM Q + WI
Sbjct: 288 VLDEAHNIEDVAREAGSIDLETSLLQDLRLELEQLATSDETSDIYSPLLEMVQAWLDWIY 347
Query: 346 RRKATLAKREFQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPH 405
++ L+K +F+H+ S W G KA++EL+ A + F +LLEC+ KAI A++ + + H
Sbjct: 348 HQEKCLSKLDFEHYASSWRGSKAIQELRLAGTCLETFQVLLECSKKAIGAASNPDETVNH 407
Query: 406 LSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNP 465
LSG + I +EGLFS+L + NG DYQL +++++KRD W T+SLWCLNP
Sbjct: 408 LSGRATIAIEGLFSALKFMLQENGRRAGDYQLVVRRFVKRDEGLAVTGWVTTVSLWCLNP 467
Query: 466 AVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVL-------- 517
VVF+D+A ++ SIILTSGTLSPM+SF+SELG+ F +EAPHV+D++ QVL
Sbjct: 468 GVVFEDIASVTRSIILTSGTLSPMDSFASELGIPFEFQMEAPHVVDMEKQVLLLEPYATI 527
Query: 518 -----------------------------TSVISTGPDNYPLNASYKTADG--------- 539
+ +STGPDN LNASYK ADG
Sbjct: 528 CCMCILRVVKLIIFPQAAMCSRFSRYQVWAAAVSTGPDNVSLNASYKNADGYSFQDALGV 587
Query: 540 -------------------YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIV 580
YK ++KLC RW+ TGQW RL++ K LF+EP+G + + FE++
Sbjct: 588 VLEEVFKVVPDGALTFFPSYKFLDKLCARWKSTGQWGRLSSVKELFLEPRGNNDQ-FELI 646
Query: 581 LKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKK--GASFLAVCRGKIVVGI 638
L+ +YNSI+ R ++V E N D+ T + + +K GA+FLAVCRGK+ GI
Sbjct: 647 LQDFYNSINSDRTPG--RNRKVGVEKNRDVKTRGTPRSTGRKAGGAAFLAVCRGKVSEGI 704
Query: 639 PFPNIN-----------DIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCI 687
F + N DIQV+LKK+YN R K LLSG+EWYC Q FRALNQA+GRCI
Sbjct: 705 DFSDRNARIVVSFVVRKDIQVTLKKQYNQENRVIKKLLSGDEWYCQQTFRALNQAVGRCI 764
Query: 688 RHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
RHR DYGAI+LLD+RF+ N ++SKWLR SI+QY+SF SL+GLK FF+
Sbjct: 765 RHRNDYGAILLLDDRFKRPGNIQYMSKWLRNSIRQYESFRDSLDGLKEFFK 815
Score = 63.9 bits (154), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 37/53 (69%)
Query: 1154 GIWCEEDGCVYNTLFCPFCSSPSNCLGVQIVASNALNFQLLNKILFYLDRLEI 1206
G+W EDGCVY +FCP C S C+GV +VA + +N L++K++F+ + +++
Sbjct: 1283 GVWIREDGCVYEHIFCPSCEDQSICVGVHVVACDKVNLSLMDKVVFFEEYVKV 1335
>gi|8886947|gb|AAF80633.1|AC069251_26 F2D10.24 [Arabidopsis thaliana]
Length = 1119
Score = 744 bits (1922), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/815 (49%), Positives = 514/815 (63%), Gaps = 137/815 (16%)
Query: 10 NYRKPLNAYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSL 69
N + P N Y +GG+QVEFPYQPYG+QL FM RVISTLDRAQRDGH HALLESPTGTGKSL
Sbjct: 19 NSKNPKNVYQIGGLQVEFPYQPYGTQLAFMSRVISTLDRAQRDGHSHALLESPTGTGKSL 78
Query: 70 SLLCSTLAWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTA 129
SLLCS LAWQ++ K + N+SHSK +QPS I S+N +
Sbjct: 79 SLLCSVLAWQKSYKSRFPNGNLSHSK-------------------TQPSDIAGSSNVEPH 119
Query: 130 QVAMNNKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRD 189
+ + PTI+YASRTH+QI+QVI EY+KT YRVPM VL SRK YCTN +V+
Sbjct: 120 EPQI----------PTIYYASRTHAQITQVIREYRKTGYRVPMTVLGSRKRYCTNSHVQG 169
Query: 190 KENIDEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSY 249
KEN+DE+C V ++ +PSLQ+ G + VHDIEDLV +G+ V G
Sbjct: 170 KENVDEKC---------------GVGRILAYPSLQQTGHNGVHDIEDLVKIGKTVTG--- 211
Query: 250 YAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDE 309
R + S+ ++ N+EDIAR+AGS++++E
Sbjct: 212 ---RLLK----------SFTVH---------------------SNMEDIAREAGSINLEE 237
Query: 310 DVLLKLQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKAL 369
D++ KL+ ELEQ+ V P IY L E+ + L+ WI R+K +LAKR+ H+FS WTGD+AL
Sbjct: 238 DIIFKLKNELEQMSEVEPEIYDSLYEVVEGLISWIGRKKDSLAKRDVDHYFSNWTGDRAL 297
Query: 370 RELQEANISRQCFPILLECATKAI--KEATDTESELPHLSGMSVITLEGLFSSLTYFFSR 427
+EL+E NI+R+ FP L C +AI EA + + + P+LSG+SV TLE LF++LTYFFSR
Sbjct: 298 KELKEFNITRENFPNLKACFNQAITKSEAAEIDPDKPYLSGISVSTLEELFATLTYFFSR 357
Query: 428 NGSHVSDYQLALQKYIKRDSKNPGGN-WTHTLSLWCLNPAVVFKDVAELSLSIILTSGTL 486
NGSHV DY++ LQ+ KR G N WT+T SLWC+NP+VVFKD+A+LSLSIILTSGTL
Sbjct: 358 NGSHVLDYEMGLQRSAKR-----GDNGWTNTFSLWCMNPSVVFKDLADLSLSIILTSGTL 412
Query: 487 SPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTADG------- 539
SPMNSFSSELG+QFGTCLEAPHVID ++QV IST P NYPLNASY+TA+
Sbjct: 413 SPMNSFSSELGMQFGTCLEAPHVIDPNMQVWAGAISTVPGNYPLNASYRTAEAYAFQDAL 472
Query: 540 ---------------------YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFE 578
YKLMEKLC RW ETGQWSRL K LF+EP+GGS++DFE
Sbjct: 473 GKSLEEICTIVPGGSLVFFPSYKLMEKLCTRWHETGQWSRLCLKTDLFIEPRGGSKDDFE 532
Query: 579 IVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGK----- 633
VLK YY+SIS G + R VK+ G + I ++ +K+G++FLAVCRGK
Sbjct: 533 TVLKEYYDSIS-GKNRLIGRNSSVKKAG----SVITEAQDDSKRGSAFLAVCRGKGPYEH 587
Query: 634 -IVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFD 692
+ F + V LK+KYNDT +SSKNLL G+EWYC QA+RALNQA GRCIRHRFD
Sbjct: 588 QSMTWFVFKFYMFLSVELKRKYNDTNKSSKNLLGGSEWYCQQAYRALNQAAGRCIRHRFD 647
Query: 693 YGAIILL---DERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFRDVKGWVGKKMF 749
YGAII L R + ++ K + SIK YD+F+AS+EGL+ FF VK V KM
Sbjct: 648 YGAIIFLVIVALRLPTTKEQSVYFKVAKASIKVYDNFEASMEGLRYFFSSVKERVDSKML 707
Query: 750 NGLENSDNDVDHVSSMDQCKEVTKQNTQELNKSDH 784
E ++SS +Q E ++ Q NKS H
Sbjct: 708 ESHEQ------NLSSENQRNEFVRKENQTQNKSSH 736
Score = 192 bits (488), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 134/338 (39%), Positives = 181/338 (53%), Gaps = 36/338 (10%)
Query: 880 VEVQEFVQLDR-VSSCKDYINTQCSLQKSSRCCEASSMPFSNEDPELLLVKETPAMDDNN 938
+ F+Q+ R CK I+ C +Q CE SS+ +EDPE V M +
Sbjct: 743 IPAHTFIQVKREAECCKGVIDLDCEVQPEPGYCEESSVTNCDEDPETSFVS---GMINGI 799
Query: 939 TMASPGSLSKDGNSSSTIFQASTQSPDQLSVHSQSLTNPVRVPSSAQPEMVVTPEKEVTG 998
A P S SK +SS S +SPDQ S N R P A E VTPE+ G
Sbjct: 800 ATARPCSSSKYESSSLETGLRSLKSPDQFLKRHVSNANFRRSPLGA--ESSVTPERYSIG 857
Query: 999 DTSNLPPERDSSLSSSVNSHTQKRRKTMVSPSVDLMLMASREANRRIEFNSETNYVKNKS 1058
D N+ E +S L+ SVNSH KRRK SP + I+ E S
Sbjct: 858 DMRNMTLEAESPLNMSVNSHVLKRRKFTTSPII-------------IDLEEEN------S 898
Query: 1059 KTSNNCAESHLSST-------PVMD-KTLQISCSLCRSPLGLPENHLYVRCSVTSSAKAH 1110
+N E H S T P +D + ++ISCSLCRS L PEN+ Y C +TSS+K +
Sbjct: 899 NAPDNRPEDHTSFTRRIEFGFPEVDQRVMRISCSLCRSTLSHPENNSYPICMLTSSSKTY 958
Query: 1111 LVSLLKQRQELCAN--VTSIPVIMTDISSVDQLLTNQSFGGASGQGIWCEEDGCVYNTLF 1168
L+SLLK+ + TS+ VIMTD S V+Q L S ++GQGIWC++DGCV+ T+F
Sbjct: 959 LLSLLKETSGTGSAEMPTSVSVIMTDCSLVNQRLCTNS-ESSNGQGIWCQQDGCVFKTIF 1017
Query: 1169 CPFCSSPSNCLGVQIVASNALNFQLLNKILFYLDRLEI 1206
CPFCS P+ CLG+Q++A+++ N Q ++KILF+ D LE+
Sbjct: 1018 CPFCSVPNTCLGMQVMATDSSNVQFMSKILFFADHLEV 1055
>gi|302768379|ref|XP_002967609.1| hypothetical protein SELMODRAFT_408754 [Selaginella moellendorffii]
gi|300164347|gb|EFJ30956.1| hypothetical protein SELMODRAFT_408754 [Selaginella moellendorffii]
Length = 1004
Score = 722 bits (1863), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/756 (48%), Positives = 491/756 (64%), Gaps = 82/756 (10%)
Query: 18 YHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRD--GHCHALLESPTGTGKSLSLLCST 75
Y + G++VEFPY+ YGSQL FM +VI+TL+RA RD GHC+ALLESPTG+GKSLSLLC+
Sbjct: 8 YQICGVKVEFPYRAYGSQLAFMGKVITTLERAFRDPDGHCNALLESPTGSGKSLSLLCAA 67
Query: 76 LAWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNN 135
LAWQQ+ ++ + P T+ GGGFIPE P++ + A N
Sbjct: 68 LAWQQH-----RMVAAASIGPATQF-------GGGFIPEG------PASGAEDKHQAKKN 109
Query: 136 KNVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDE 195
K PTIF+A+RTHSQISQ++ E KKT YRVPMA+LA+RKHYCTN++V K N+D+
Sbjct: 110 K------PPTIFFATRTHSQISQIVHELKKTNYRVPMAILAARKHYCTNQHVCKKANLDD 163
Query: 196 ECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSM 255
ECK+LL D + CPQFKNV+K++ HP+L+KGGCHE HDIEDLV + + VRGC+Y+ +R M
Sbjct: 164 ECKVLLKDPHKACPQFKNVNKLKHHPALRKGGCHETHDIEDLVTLARSVRGCAYFTSRIM 223
Query: 256 ADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKL 315
A DAQ+VFCPYSYI++P+ R AM+VDI+GAI+I DEAHNIED++R+AGSVD+D +L
Sbjct: 224 AADAQIVFCPYSYILSPIFRKAMDVDIRGAIIIFDEAHNIEDMSREAGSVDLDTSILEAS 283
Query: 316 QMELEQVCSVNPM------IYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKAL 369
EL +Y+PL +M Q+L+ WI ++ L ++E H++S WTG K L
Sbjct: 284 SEELRNELEELSSSEDSHDLYRPLFDMVQELLIWIRQQDENLQRKEVDHYYSNWTGPKGL 343
Query: 370 RELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVITLEGLFSSLTYFFSRNG 429
+LQ A IS + F I L+CA KA A+D + E PHLSG +EGLF +L + S+
Sbjct: 344 EQLQAAGISSESFSIQLDCAVKAAGAASDPDPEKPHLSGRCASAMEGLFCALKFMLSKP- 402
Query: 430 SHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPM 489
++ DYQ+ +Q+ + + W H LS WCLNP VVF ++A + S++LTSGTLSPM
Sbjct: 403 EYIHDYQIVVQRVLNKVEGT--DEWLHKLSFWCLNPGVVFNEIATICKSVVLTSGTLSPM 460
Query: 490 NSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTA------------ 537
SF+SELG F +EAPH+ID++ Q+L S +S GP N PLNASY+ A
Sbjct: 461 GSFASELGTSFEMVMEAPHIIDLNSQLLVSAVSFGPGNVPLNASYQYANTVAFQDALGTA 520
Query: 538 ---------DG-------YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVL 581
DG YKL++++CNRW+ TGQW R+ K +FVEP+ GS FE +L
Sbjct: 521 LEQICNIVPDGALVFFPSYKLLQRVCNRWKTTGQWKRILDIKSVFVEPQ-GSTGKFEDIL 579
Query: 582 KHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFP 641
K +Y I +G R+KR+ L + GA+FLAVCRGK+VVGIPFP
Sbjct: 580 KDFYKVI-KGENVEPSRRKRI-------LTPKNFTSAGGQTGAAFLAVCRGKVVVGIPFP 631
Query: 642 NINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDE 701
N+ND+QV++KK YND ++ K+LL G++W GRCIRHR DYGAI+LLDE
Sbjct: 632 NLNDVQVAMKKNYNDNQKTLKSLLGGDQW----------NVTGRCIRHRGDYGAIVLLDE 681
Query: 702 RFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFF 737
RF + ++SKWLRKSI + SF +L L++FF
Sbjct: 682 RFNKANYTGYMSKWLRKSIMRPASFQEALRDLQAFF 717
Score = 57.8 bits (138), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 9/90 (10%)
Query: 1125 VTSIPVIMTDISSVDQL--LTNQSFGG-------ASGQGIWCEEDGCVYNTLFCPFCSSP 1175
+T+ P++ I L N + GG A G+W EEDGCV+ + C +C+
Sbjct: 866 MTATPLLRVIIMEAQHLHSYLNDNPGGQAFRERNACSSGVWIEEDGCVFKPIVCGWCTDL 925
Query: 1176 SNCLGVQIVASNALNFQLLNKILFYLDRLE 1205
CLG I+A++ N + K++ +LD +E
Sbjct: 926 DVCLGAHILAADPANMKYAGKVVLFLDSIE 955
>gi|414886610|tpg|DAA62624.1| TPA: hypothetical protein ZEAMMB73_124196 [Zea mays]
Length = 1167
Score = 709 bits (1830), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/740 (51%), Positives = 490/740 (66%), Gaps = 92/740 (12%)
Query: 18 YHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLA 77
Y VGG+ VEFPY+PYG+QL FM RVI+TLDRA+R G HALLESPTGTGKSLSLLCS LA
Sbjct: 32 YQVGGVPVEFPYKPYGTQLAFMGRVIATLDRARRQGRSHALLESPTGTGKSLSLLCSALA 91
Query: 78 WQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPE-SQPSTIPPSTNGQTAQVAMNNK 136
WQ++ L++ A DPL +GGGF+P+ +QP P + K
Sbjct: 92 WQRHYPLRSPPA------------PDPLLHGGGFVPDDTQPQPTP----------VVPEK 129
Query: 137 NVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE 196
VKKK P I+YA+RTH+QISQV+ EY+KT+YRV MA+LASRKHYC NK+ +NIDE+
Sbjct: 130 AVKKKNAPIIYYATRTHAQISQVVREYRKTSYRVRMAILASRKHYCVNKFACASDNIDEK 189
Query: 197 CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMA 256
N K+ HPSLQ GGC+EVHDIEDLV VGQ +GC Y+AA+ MA
Sbjct: 190 W---------------NAQKLSRHPSLQIGGCYEVHDIEDLVRVGQKAKGCPYFAAQHMA 234
Query: 257 DDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVL---- 312
+ AQLVFCPY+Y+I+PV+R AM++DI G+I+ILDEAHNIEDIARDAGS+DIDE+ L
Sbjct: 235 EAAQLVFCPYNYLISPVVRRAMDIDISGSIIILDEAHNIEDIARDAGSIDIDEESLCYLK 294
Query: 313 --LKL-------QMELEQVCS--VNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFS 361
LKL Q EL+ + + MIYQPL ++ Q L+GWI R+ L EF H S
Sbjct: 295 QMLKLIHYGEVLQGELQNLAANEAVAMIYQPLHDIIQALIGWIAEREDNLHNHEFGHPAS 354
Query: 362 CWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVITLEGLFSSL 421
WTG+KA+ ELQ A IS FP+L ECATKAIK A+DTES+ HLSG S +TLE LFSSL
Sbjct: 355 YWTGEKAMNELQRAGISPMYFPVLQECATKAIKAASDTESDGSHLSGGSAMTLESLFSSL 414
Query: 422 TYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIIL 481
+YFF++ G + DYQLALQ+++K++ K+ + T T+SLWCLNPAVVF+++A+ +LS+IL
Sbjct: 415 SYFFAQKGRNSCDYQLALQRFVKKEGKDVISS-TCTMSLWCLNPAVVFQEIADRTLSVIL 473
Query: 482 TSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTADGYK 541
TSGTLSPM SF+SELGVQF C+EAPHVI+ D QV +V+S+GP LNASYKTAD
Sbjct: 474 TSGTLSPMGSFTSELGVQFEACMEAPHVINADSQVFAAVLSSGPTRQILNASYKTADNSS 533
Query: 542 LMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKR 601
++L E R+ L P ++++ K G + +K
Sbjct: 534 FQDELGASLEEI---CRIVPGGALVFFP------SYKLMDKLQVRWSQTGQWARLNAQKH 584
Query: 602 VKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYNDTYRSS 661
V + N D I ND+QV LK++YND+Y+SS
Sbjct: 585 VFVDTNIDSTWIR-----------------------------NDVQVKLKRRYNDSYKSS 615
Query: 662 KNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIK 721
K+LLSG+EWYC+QAFRALNQA GRCIRH+ DYG IIL+DER+Q++RN +ISKWLR +IK
Sbjct: 616 KHLLSGSEWYCHQAFRALNQAAGRCIRHKSDYGGIILIDERYQDDRNVLYISKWLRNAIK 675
Query: 722 QYDSFDASLEGLKSFFRDVK 741
+YDSF ++ L+ FF++ +
Sbjct: 676 KYDSFQETMAKLQKFFQNAQ 695
Score = 110 bits (275), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 95/314 (30%), Positives = 144/314 (45%), Gaps = 50/314 (15%)
Query: 988 MVVTPEKEVTGDTSNLPPERDSSLSSSVNSHTQKRRK----------TMVSPSVDLMLMA 1037
+ TPE+ D DS ++ SVNSH +K+R+ T SP
Sbjct: 869 LAATPERTTDKDC------HDSFINRSVNSHYEKKRRLSSPMSCTYTTQSSPPSKSFCHT 922
Query: 1038 SREANRRIEFNSETNYVKN-------KSKTSNNCAESHLSSTPVMDKTLQISCSLCRSPL 1090
+ NSE KN K N + +S+ M K L I+C C++ L
Sbjct: 923 GSVMPGDLNRNSEL-CCKNIGLSRCENVKFERNYSPEEVSAKKSMQKKLLINCIRCKTAL 981
Query: 1091 GLPENHLYVRCSVTSSAKAHLVSLLKQ--------RQELCANV-TSIPVIMTDISSVDQL 1141
GL E+ V C+ S+K +L LLK + A+ T + V+ + SS
Sbjct: 982 GLEEDGFLVTCTQYYSSKLYLAYLLKHGLSTFGILEDDFSASTPTEVHVVQCEASS---- 1037
Query: 1142 LTNQSFGGASGQG-IWCEEDGCVYNTLFCPFCSSPSN---CLGVQIVASNALNFQLLNKI 1197
L FG S QG +W +DGCVYN + C CSS + LGVQ++A++ N QL+ K+
Sbjct: 1038 LNKNVFGKFSSQGHVWFAKDGCVYNAMTCSLCSSENTSAMVLGVQVLATDRSNQQLVEKV 1097
Query: 1198 LFYLDRLEIRI-PESGKFKSEAKDSSPI-THSAMDKVAAFSCIEKFSYSPILEDSGGWRS 1255
L + DRL+++ P G+ +D+S I S +D ++ F+Y P+ +D S
Sbjct: 1098 LLFSDRLDVQSEPSKGQISRTRRDASNICQQSVID-------LDSFAYKPLKKDPVALNS 1150
Query: 1256 TKSKLRLPKKGRGS 1269
+SKLRLP + +
Sbjct: 1151 RRSKLRLPAPNKST 1164
>gi|357159919|ref|XP_003578599.1| PREDICTED: uncharacterized protein LOC100829852 [Brachypodium
distachyon]
Length = 1225
Score = 694 bits (1792), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/651 (54%), Positives = 452/651 (69%), Gaps = 54/651 (8%)
Query: 26 EFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCKLK 85
EFPY+PYG+QL FM RVI+TLDRA+R G HALLESPTGTGKSLSLLCS LAWQ++ L+
Sbjct: 38 EFPYKPYGTQLAFMGRVIATLDRARRQGRSHALLESPTGTGKSLSLLCSALAWQRHYPLR 97
Query: 86 NQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKKMTPT 145
DP +GGGF+P+ T Q A + K KKK PT
Sbjct: 98 APP---------APPAADPFLHGGGFVPDD--------TQQQQATPGVPEKAAKKKNAPT 140
Query: 146 IFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEECKLLLGDRN 205
I+YA+RTHSQI+QV+ E +KT+YRV MAVLASRKHYC NK V +NIDE+CKLLL D+
Sbjct: 141 IYYATRTHSQITQVVRELRKTSYRVRMAVLASRKHYCVNKNVCMSDNIDEQCKLLLDDKV 200
Query: 206 LGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCP 265
GCP+FKN K+ HPSLQKGGC+EVHDIEDL+ VG+ V+GC Y+AA++MA+ AQLVFCP
Sbjct: 201 QGCPEFKNAQKLSRHPSLQKGGCYEVHDIEDLLRVGRQVKGCPYFAAQTMAETAQLVFCP 260
Query: 266 YSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQVCSV 325
Y+Y+I+P++R AM++DI G+I+ILDEAHNIEDIARDAGSVD+DE+ L L EL + +
Sbjct: 261 YNYLISPIVRRAMDIDISGSIVILDEAHNIEDIARDAGSVDVDEESLTTLAGELANLATN 320
Query: 326 NPM--IYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRELQEANISRQCFP 383
+ IYQPL E+ + L+ WI + L EF+H S WTG+ A++ELQ+A I+ FP
Sbjct: 321 EAVAKIYQPLHEVIEGLINWITDQVGNLRDNEFEHPASFWTGENAMKELQKAGITPAYFP 380
Query: 384 ILLECATKAIKEATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYI 443
IL ECATKA+K A+DTES+ +L+G V+TL+ LFSSL++FF+ NG H DYQLA Q ++
Sbjct: 381 ILQECATKAVKAASDTESDGEYLTGRGVMTLDSLFSSLSHFFAGNGCHFYDYQLAFQHFV 440
Query: 444 KRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTC 503
+R+ + +SLWCL+PAVVF+ +++L+LS+ILTSGTLSPM SF+SELGVQF C
Sbjct: 441 QREGSSSVIGSRSVMSLWCLSPAVVFQGISDLTLSVILTSGTLSPMGSFASELGVQFDAC 500
Query: 504 LEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTAD------------------------- 538
+EAPHVID D QV SVIS+GP YPLNASYKTAD
Sbjct: 501 MEAPHVIDADSQVFASVISSGPTKYPLNASYKTADVYSFQDELGASIEEICRIVPGGALV 560
Query: 539 ---GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCA 595
YKL++K+ RW +TGQW+RL+A KP+FVEP+ GS E+ E +LK YY++I A
Sbjct: 561 FFPSYKLLDKMKVRWAQTGQWARLHANKPVFVEPR-GSTEELEPILKGYYDAILGK---A 616
Query: 596 VVRKKR--VKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNIN 644
++K R K+ N + SQE+A K GA+FLAVCRGK+ GI F + N
Sbjct: 617 PLKKGRGGAKQIVKNRVRKNSSQESA-KGGAAFLAVCRGKVSEGIDFSDDN 666
Score = 103 bits (256), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 106/201 (52%), Gaps = 22/201 (10%)
Query: 1079 LQISCSLCRSPLGLPENHLYVRCSVTSSAKAHLVSLLK---------QRQELCANVTSIP 1129
L I CS C++PLGL ++ V CS++S + +L LL+ Q + + +
Sbjct: 1014 LLIYCSRCKTPLGLQKDGFLVSCSLSSPSNFYLTYLLRHGLSSVGFAQDDLMASPPAMVN 1073
Query: 1130 VIMTDISSVDQ--LLTNQSFGGASGQGIWCEEDGCVYNTLFCPFCSSPSNC---LGVQIV 1184
VI+ D SS++Q L + G A G+W E+DGCVY + CPFC + C LGV+++
Sbjct: 1074 VIVCDASSLNQETLTKFRGQGSAHHSGVWSEKDGCVYKPVTCPFCPCENACAMPLGVRVL 1133
Query: 1185 ASNALNFQLLNKILFYLDRLEIRIPESGKFKSEAKDSSPITHSAMDKVAAFSCI--EKFS 1242
A++A N L+++L + DRL+I K +S + + A + + I E F+
Sbjct: 1134 ATDASNLHSLDRVLLFADRLDI------KHESSNEQVTSNQKGAGNPMPPPPVIDLETFA 1187
Query: 1243 YSPILEDSGGWRSTKSKLRLP 1263
Y P+ +D + +SKLRLP
Sbjct: 1188 YKPLKKDPVPLNTRRSKLRLP 1208
>gi|242050104|ref|XP_002462796.1| hypothetical protein SORBIDRAFT_02g032150 [Sorghum bicolor]
gi|241926173|gb|EER99317.1| hypothetical protein SORBIDRAFT_02g032150 [Sorghum bicolor]
Length = 1153
Score = 690 bits (1780), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/719 (51%), Positives = 475/719 (66%), Gaps = 73/719 (10%)
Query: 26 EFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCKLK 85
EFPY+PYG+QL FM RVI+TLDRA+R G HALLESPTGTGKSLSLLCS LAWQ++ L+
Sbjct: 34 EFPYKPYGTQLAFMGRVIATLDRARRQGRSHALLESPTGTGKSLSLLCSALAWQRHYPLR 93
Query: 86 NQLANISHSKPDTEAVTDPLANGGGFIPE-SQPSTIPPSTNGQTAQVAMNNKNVKKKMTP 144
+ P DP +GGGF+P+ +QP P + K KKK P
Sbjct: 94 ------TPPAPAPAPSPDPFLHGGGFVPDDTQPQATP----------VVPEKAAKKKNAP 137
Query: 145 TIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEECKLLLGDR 204
TI+YA+RTH+QISQV+ EY+KT+YRV MA+LASRKHYC N + +NIDE+
Sbjct: 138 TIYYATRTHAQISQVVREYRKTSYRVRMAILASRKHYCVNMFACASDNIDEQW------- 190
Query: 205 NLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFC 264
N K+ HPSLQ GGC+EVHDIEDLV VGQ +GC Y+AA+ MA+ AQLVFC
Sbjct: 191 --------NAQKLSRHPSLQIGGCYEVHDIEDLVRVGQKAKGCPYFAAQHMAEAAQLVFC 242
Query: 265 PYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQVCS 324
PY+Y+I+PV+R AM++DI +I+ILDEAHNIEDIARDAGS+DIDE+ L LQ EL+ + +
Sbjct: 243 PYNYLISPVVRRAMDIDISSSIIILDEAHNIEDIARDAGSIDIDEESLHLLQGELQNLAT 302
Query: 325 --VNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRELQEANISRQCF 382
MIYQPL ++ Q L+GWI R+ L EF H S WTG+KA+ ELQ A IS F
Sbjct: 303 DEAVAMIYQPLHDIIQGLIGWIAEREGNLHNHEFGHPASYWTGEKAMNELQRAGISPMYF 362
Query: 383 PILLECATKAIKEATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKY 442
P+L ECATKAIK A+DTES+ HLSG +TLE LFSSL+YFF + G + DYQLALQ++
Sbjct: 363 PVLQECATKAIKAASDTESDGSHLSGGRAMTLESLFSSLSYFFGQKGRNSCDYQLALQRF 422
Query: 443 IKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGT 502
+K++ + + T+SLWCLNPAVVF+++A+ +LS+ILTSGTLSPM SF+SELGVQF
Sbjct: 423 VKKEGNDEISSRC-TMSLWCLNPAVVFQEIADRTLSVILTSGTLSPMGSFTSELGVQFEA 481
Query: 503 CLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTADGYKLMEKLCNRWRETGQWSRLNAK 562
C+EAPHVI+ D QV +V+S+GP LNASYKTAD ++L E R+
Sbjct: 482 CMEAPHVINADSQVFAAVLSSGPTRQILNASYKTADNLSFQDELGASLEEI---CRIVPG 538
Query: 563 KPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKK 622
L P ++++ K G + +K V + N D I
Sbjct: 539 GALVFFP------SYKLLDKLQVRWSQTGQWARLNAQKHVFVDTNIDSTWIR-------- 584
Query: 623 GASFLAVCRGKIVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQA 682
ND+QV LKK+YND+Y+SSK+LLSG+EWYC+QAFRALNQA
Sbjct: 585 ---------------------NDVQVKLKKRYNDSYKSSKHLLSGSEWYCHQAFRALNQA 623
Query: 683 IGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFRDVK 741
GRCIRH+ DYG IIL+DER+QE RN A+ISKWLR +IK+YDSF ++ L+ FF++ +
Sbjct: 624 AGRCIRHKSDYGGIILIDERYQEGRNVAYISKWLRNAIKKYDSFQETMAELQKFFQNAE 682
Score = 100 bits (248), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 108/379 (28%), Positives = 177/379 (46%), Gaps = 61/379 (16%)
Query: 917 PFSNEDPELLLVKETPAMDDNNTMASPGSLSKDGNSSSTIFQASTQSPDQLSVHSQSLTN 976
P + + LV+ET A +ASP + S + N+S I + DQ+ SL +
Sbjct: 795 PLEDRSRQPTLVEETSAA---TPVASPSNYS-EVNTSVRI-----NNGDQIVNTPISLFS 845
Query: 977 PVR-VPSSAQPEMVVTPEKEVTGDTSNLPPERDSSLSSSVNSHTQKRRKTMV-------- 1027
R + S + P TPE+ D +S ++ SVNSH +K+R+
Sbjct: 846 TNRNISSLSTP--AATPERTTDKDC------HESLINRSVNSHCEKKRRLSSPMSCCTYT 897
Query: 1028 ----SPSVDLMLMASR---EANRRIEF---NSETNYVKNKSKTSNNCAESHLSSTPVMDK 1077
SP S + NR E N + +N K N +S+ + K
Sbjct: 898 IRSSSPGKSFCHTGSAVPGDVNRNAELCCKNIGLSSCEN-VKLERNYKPEEVSAKKMQKK 956
Query: 1078 TLQISCSLCRSPLGLPENHLYVRCSVTSSAKAHLVSLLKQ--------RQELCANVTS-I 1128
+ISC C++ LGL E+ V C+ +SS+K +L LL+ + A+ + +
Sbjct: 957 --RISCIRCKTALGLEEDGFLVTCTQSSSSKLYLAYLLRHGLSAAGFPEDDFSASTPAEV 1014
Query: 1129 PVIMTDISSVDQLLTNQSFGGASGQG-IWCEEDGCVYNTLFCPFCSSPSNC---LGVQIV 1184
V+ + SS++Q + FG QG +W +DGCVY+ + C FCSS + C LGVQ++
Sbjct: 1015 QVVECEASSLNQNI----FGKFGNQGPVWSAKDGCVYSAMTCTFCSSENTCAMVLGVQVL 1070
Query: 1185 ASNALNFQLLNKILFYLDRLEIRI-PESGKFKSEAKDSSPITHSAMDKVAAFSCIEKFSY 1243
A++ LN QL+ K+L + DRL+++ P +G+ +D+S +++ +E F+Y
Sbjct: 1071 ATDKLNQQLVEKVLLFSDRLDVQSEPSNGQISRTRRDAS----NSISPQPVMIDLESFAY 1126
Query: 1244 SPILEDSGGWRSTKSKLRL 1262
P+ D S +SK L
Sbjct: 1127 KPLKMDPVALNSRRSKFCL 1145
>gi|297609925|ref|NP_001063870.2| Os09g0551800 [Oryza sativa Japonica Group]
gi|255679120|dbj|BAF25784.2| Os09g0551800 [Oryza sativa Japonica Group]
Length = 1187
Score = 686 bits (1771), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/655 (53%), Positives = 449/655 (68%), Gaps = 54/655 (8%)
Query: 18 YHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLA 77
Y VGG+ VEFPY+PYG+QL FM RVI+TLDRA+R G HALLESPTGTGKSLSLLCS LA
Sbjct: 25 YQVGGVPVEFPYKPYGTQLAFMGRVIATLDRARRQGRSHALLESPTGTGKSLSLLCSALA 84
Query: 78 WQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKN 137
WQ++ L+ A +GGGF+P+ P + K
Sbjct: 85 WQRHYPLRAPPAAAPDP----------FLHGGGFVPDDTQKQATP---------GVPEKA 125
Query: 138 VKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEEC 197
+KK PTI+YA+RTH+QI+QV+ EY+KT+YRV MA+LASRKHYC NK V NIDE C
Sbjct: 126 TRKKNVPTIYYATRTHAQITQVVREYRKTSYRVRMAILASRKHYCVNKNVCMSGNIDELC 185
Query: 198 KLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMAD 257
K LL D GCP++KN K+ HPSLQ GGC+EVHDIEDLV VG+ V+GC Y+AA++MA+
Sbjct: 186 KSLLDDSAQGCPEYKNAQKLSRHPSLQIGGCYEVHDIEDLVRVGRKVKGCPYFAAQTMAE 245
Query: 258 DAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQM 317
AQLVFCPY+Y+I+P++R AM++DI+G+I++LDEAHNIEDIARDAGS D+DE+ LL L+
Sbjct: 246 AAQLVFCPYNYLISPIVRRAMDIDIRGSIIVLDEAHNIEDIARDAGSFDVDEESLLFLRQ 305
Query: 318 ELEQVCSVNPM--IYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRELQEA 375
ELE + + + IY+PL E+ Q L GWI+ + L K EF+H S WTG++A++EL+ A
Sbjct: 306 ELEGLVTDEAVAKIYEPLHEVIQGLNGWIDEQGNNLQKNEFEHPASFWTGEEAMKELKYA 365
Query: 376 NISRQCFPILLECATKAIKEATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDY 435
I+ FP+L ECATKAIK A+D ESE HLSG S +TLE LFSSL+YFF+ NG H +DY
Sbjct: 366 GITPVNFPVLQECATKAIKAASDAESEGVHLSGGSAMTLESLFSSLSYFFAENGRHSNDY 425
Query: 436 QLALQKYIKRDSKNPGG--NWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFS 493
QLALQ++ KR+ + W +SLWCLNPAVVF+D+A+L+LS+ILTSGTLSPM SF+
Sbjct: 426 QLALQRFAKREGNSVTSFIGWKCVMSLWCLNPAVVFRDIADLTLSVILTSGTLSPMGSFA 485
Query: 494 SELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTAD--------------- 538
SELGVQF C+EAPHVI+ D QV +V+S+GP LNASY+TA+
Sbjct: 486 SELGVQFEACMEAPHVINADSQVFATVLSSGPTGRRLNASYRTANEYSFQDELGATLEEI 545
Query: 539 -------------GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYY 585
Y L+EKL RW +TGQW+RL A+K + VEP+ GS E+ E VLK YY
Sbjct: 546 CRVVPGGALVFFPSYNLLEKLQRRWSQTGQWARLEAQKHVCVEPR-GSTEELEPVLKGYY 604
Query: 586 NSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPF 640
N+I G + K+ N + SQE+A K GA+FLAVCRGK+ GI F
Sbjct: 605 NAI-LGKAPPKKGRGGAKQIVKNRVTKDSSQESA-KGGAAFLAVCRGKVSEGIDF 657
Score = 80.5 bits (197), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 98/357 (27%), Positives = 162/357 (45%), Gaps = 56/357 (15%)
Query: 940 MASPGSLSKDGNSSSTIFQASTQSPDQLSVHSQSLTNPVRVPSSAQPEMVVTPEKEVTGD 999
+ASP + ++G ++ST+ D S + N V +SA TPE+ +G
Sbjct: 845 IASPSN--RNGENASTVMNEGDPVLDLPISLSAANRNISCVSTSA-----ATPER--SGS 895
Query: 1000 TSNLPPERDSSLSSSVNSHTQKRRKTMVSPSVDLMLMASREANRRIEF---NSETNYVKN 1056
S+L E +S + SVNSH QKRRK +S + R + + + + +
Sbjct: 896 ISHL--EHESWTNRSVNSHCQKRRK--LSSPMSCCTYTERSCSPSKPYLHGGCDVSMLPG 951
Query: 1057 KSKTSNNCAES---------------HLSSTPVMDKT---LQISCSLCRSPLGLPENHLY 1098
+T C +S L+ P + T L I C+ C++ LGL E+
Sbjct: 952 DLRTDGMCCKSMKMSRCENVKVERNSKLAEFPSRESTQEKLFICCARCKTALGLQEDGFL 1011
Query: 1099 VRCSVTSSAKAHLVSL---------LKQRQELCANVTSIPVIMTDISSVDQL----LTNQ 1145
V CS + S+K +L L L + L + I V++ ++SSV+++ L+N+
Sbjct: 1012 VSCSSSLSSKFYLTYLWRHGPSADILPGKDFLASPPLKIKVMVCNVSSVNKMMLGNLSNE 1071
Query: 1146 SFGGASGQGIWCEEDGCVYNTLFCPFCSSPSNC---LGVQIVASNALNFQLLNKILFYLD 1202
G A W E+DGCVY + C CS + C LG Q+VA+++ N Q +K++ + D
Sbjct: 1072 --GSAHNSSFWSEKDGCVYKPVTCQTCSCKNACVTTLGAQVVATDSSNQQFCDKVILFDD 1129
Query: 1203 RLEIRIPESGKFKSEAKDSSPITHSAMDKVAAFSCIEKFSYSPILEDSGGWRSTKSK 1259
L ++ G K +A S+PI +E F+Y P+ +D + +SK
Sbjct: 1130 LLHVK---HGPSKDQAL-SAPIGTVKPISPPPVIDLESFAYKPLKKDPVPVNTRRSK 1182
>gi|414886609|tpg|DAA62623.1| TPA: hypothetical protein ZEAMMB73_124196, partial [Zea mays]
Length = 631
Score = 632 bits (1629), Expect = e-178, Method: Compositional matrix adjust.
Identities = 337/617 (54%), Positives = 423/617 (68%), Gaps = 83/617 (13%)
Query: 16 NAYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCST 75
Y VGG+ VEFPY+PYG+QL FM RVI+TLDRA+R G HALLESPTGTGKSLSLLCS
Sbjct: 30 GVYQVGGVPVEFPYKPYGTQLAFMGRVIATLDRARRQGRSHALLESPTGTGKSLSLLCSA 89
Query: 76 LAWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPE-SQPSTIPPSTNGQTAQVAMN 134
LAWQ++ L++ A DPL +GGGF+P+ +QP P +
Sbjct: 90 LAWQRHYPLRSPPA------------PDPLLHGGGFVPDDTQPQPTP----------VVP 127
Query: 135 NKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENID 194
K VKKK P I+YA+RTH+QISQV+ EY+KT+YRV MA+LASRKHYC NK+ +NID
Sbjct: 128 EKAVKKKNAPIIYYATRTHAQISQVVREYRKTSYRVRMAILASRKHYCVNKFACASDNID 187
Query: 195 EECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARS 254
E+ N K+ HPSLQ GGC+EVHDIEDLV VGQ +GC Y+AA+
Sbjct: 188 EKW---------------NAQKLSRHPSLQIGGCYEVHDIEDLVRVGQKAKGCPYFAAQH 232
Query: 255 MADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVL-- 312
MA+ AQLVFCPY+Y+I+PV+R AM++DI G+I+ILDEAHNIEDIARDAGS+DIDE+ L
Sbjct: 233 MAEAAQLVFCPYNYLISPVVRRAMDIDISGSIIILDEAHNIEDIARDAGSIDIDEESLCY 292
Query: 313 LK-----------LQMELEQVCS--VNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHF 359
LK LQ EL+ + + MIYQPL ++ Q L+GWI R+ L EF H
Sbjct: 293 LKQMLKLIHYGEVLQGELQNLAANEAVAMIYQPLHDIIQALIGWIAEREDNLHNHEFGHP 352
Query: 360 FSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVITLEGLFS 419
S WTG+KA+ ELQ A IS FP+L ECATKAIK A+DTES+ HLSG S +TLE LFS
Sbjct: 353 ASYWTGEKAMNELQRAGISPMYFPVLQECATKAIKAASDTESDGSHLSGGSAMTLESLFS 412
Query: 420 SLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSI 479
SL+YFF++ G + DYQLALQ+++K++ K+ + T T+SLWCLNPAVVF+++A+ +LS+
Sbjct: 413 SLSYFFAQKGRNSCDYQLALQRFVKKEGKDVISS-TCTMSLWCLNPAVVFQEIADRTLSV 471
Query: 480 ILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTAD- 538
ILTSGTLSPM SF+SELGVQF C+EAPHVI+ D QV +V+S+GP LNASYKTAD
Sbjct: 472 ILTSGTLSPMGSFTSELGVQFEACMEAPHVINADSQVFAAVLSSGPTRQILNASYKTADN 531
Query: 539 ---------------------------GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKG 571
YKLM+KL RW +TGQW+RLNA+K +FVEPK
Sbjct: 532 SSFQDELGASLEEICRIVPGGALVFFPSYKLMDKLQVRWSQTGQWARLNAQKHVFVEPK- 590
Query: 572 GSQEDFEIVLKHYYNSI 588
GS E+ + VLK YY++I
Sbjct: 591 GSSEELDPVLKGYYDAI 607
>gi|224149616|ref|XP_002336837.1| predicted protein [Populus trichocarpa]
gi|222836982|gb|EEE75375.1| predicted protein [Populus trichocarpa]
Length = 339
Score = 550 bits (1416), Expect = e-153, Method: Compositional matrix adjust.
Identities = 256/328 (78%), Positives = 288/328 (87%), Gaps = 2/328 (0%)
Query: 14 PLNAYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLC 73
P +YH+GGIQVEFPY+PYG+QL FM RVISTLDRAQRDGHCHALLESPTGTGKSLSLLC
Sbjct: 14 PKKSYHIGGIQVEFPYKPYGTQLAFMGRVISTLDRAQRDGHCHALLESPTGTGKSLSLLC 73
Query: 74 STLAWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAM 133
STLAWQQN KLKNQ AN++HS P+ EA+TDPLA+GGGF+PES PS+ P+ + AQ
Sbjct: 74 STLAWQQNYKLKNQYANLTHSTPNPEAITDPLAHGGGFVPESTPSSTEPTAAVELAQKVA 133
Query: 134 NNKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENI 193
+NK KKK P I+YASRTHSQISQV+SE++KT YRVPMAVLASRKHYCTN +V KEN+
Sbjct: 134 SNK--KKKAVPKIYYASRTHSQISQVVSEFRKTTYRVPMAVLASRKHYCTNVHVNRKENV 191
Query: 194 DEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAAR 253
DEECKLLL D+ GC QFKN +KVRGHPSLQKGGCHEVHDIEDLV VGQVV+GCSYYAAR
Sbjct: 192 DEECKLLLKDKEAGCLQFKNANKVRGHPSLQKGGCHEVHDIEDLVKVGQVVKGCSYYAAR 251
Query: 254 SMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLL 313
SMADDAQLVFCPY+YIINPVIRGAMEVDI GAIL+LDEAHNIEDIARDAGSVD++EDVL
Sbjct: 252 SMADDAQLVFCPYNYIINPVIRGAMEVDIIGAILVLDEAHNIEDIARDAGSVDVEEDVLH 311
Query: 314 KLQMELEQVCSVNPMIYQPLIEMTQDLV 341
KLQ EL+++C V+PMIYQPL EM Q +V
Sbjct: 312 KLQTELQELCPVDPMIYQPLYEMAQVIV 339
>gi|384246051|gb|EIE19542.1| DNA repair helicase [Coccomyxa subellipsoidea C-169]
Length = 1621
Score = 463 bits (1191), Expect = e-127, Method: Compositional matrix adjust.
Identities = 289/795 (36%), Positives = 413/795 (51%), Gaps = 162/795 (20%)
Query: 39 MCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCKLKNQLANISHSKPDT 98
M +VI T+ A R+ +ALLE+PTG+GK+LSLLCS L+WQ+ K + + +P+
Sbjct: 1 MAKVIQTV--ANRE---NALLEAPTGSGKTLSLLCSALSWQRKLKQEG-YSEAWEGRPNI 54
Query: 99 EAVTDPLANGGGFIPESQPSTIPP----------STNGQTAQVAMNNKNVKKKMTPTIFY 148
P G PE + PP + G T N ++ P IFY
Sbjct: 55 -----PDDGQGQETPEGKSVKTPPEPISCTPPGSGSAGSTEGEVTPNGAPPREPLPRIFY 109
Query: 149 ASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEECKLLLGDRNLGC 208
A+RTHSQI+Q ASR HYC + V K N+DEEC+ LL DR+ C
Sbjct: 110 ATRTHSQIAQ-----------------ASRSHYCVHSGVSKKPNVDEECEKLLEDRS--C 150
Query: 209 PQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSY 268
F N+ KV + +VHDIEDLV VG+ ++ C Y+ AR +A+ A+L+FCPY+Y
Sbjct: 151 RYFNNLPKVLNGLATY---VPQVHDIEDLVQVGKEIKACPYFVARKIAEHAELLFCPYNY 207
Query: 269 IINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQVC--SVN 326
+I+PVIR +M ++I+ A++I DEAHNIEDI+RDA SV+++ ++ +Q E C + +
Sbjct: 208 LIDPVIRSSMGINIQHAVIIFDEAHNIEDISRDAASVEMERASMVDVQKAFEYKCLEADS 267
Query: 327 PMIYQPLIEMTQDLVGWIERR--KATLAKRE--FQHFFSCWTGDKALRELQEANISRQCF 382
IY PL + W++ R + + K++ Q + +G + EL+EA + ++
Sbjct: 268 REIYGPLADAFGRFANWLKERCERPDVRKQQGAGQRYEGITSGLQMREELEEAGLGKEQV 327
Query: 383 PILLECATKA-IKEATDTESELPHLS---GMSVITLEGLFSS-----------------L 421
+L E KA +E E P L+ G S L+ + SS L
Sbjct: 328 DLLHELYVKARAEEQKKEEPPAPALAEEDGASEHQLQNVASSQAKKKGAGFALGQTSRLL 387
Query: 422 TYFFSRNGSHVSDYQLALQKYIKRDSKNPG--------------GNWTHTLSLWCLNPAV 467
T S+VSDY+LALQ++ + S P W LWCLNPAV
Sbjct: 388 TILNLMYSSNVSDYRLALQRWYR--SSQPRRRGRRREDDEEDEVAGWALQFCLWCLNPAV 445
Query: 468 VFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDN 527
F +A + SIILTSGTLSP++SF+SEL F EAPHVI+ LQV I GPD+
Sbjct: 446 AFHSIAAAARSIILTSGTLSPLDSFASELDTSFPVRFEAPHVINARLQVWAGSICAGPDD 505
Query: 528 YPLNASYK---------------------TADG-------YKLMEKLCNRWRETGQWSRL 559
+ A+Y+ DG Y ++++L RW+ TG W++L
Sbjct: 506 VKIAATYEHSLKPDFQDSVGASIAAIAGIVPDGLLVFLPSYVMLDRLMERWKVTGVWAQL 565
Query: 560 NAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENA 619
K + EP+ G+ + F+ V+ +Y +I +G
Sbjct: 566 QQTKAIVCEPR-GTGDAFDAVMSDFYTAIREG---------------------------- 596
Query: 620 NKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKKYNDTYR--SSK 662
+GA F A+CRGK IVVGIPFPN+ D +V+LKKKYND + S+
Sbjct: 597 --RGAIFFAICRGKVSEGLDFTDKNARAVIVVGIPFPNVKDTKVNLKKKYNDAGQRDRSR 654
Query: 663 NLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQ 722
+LL+G++WY QAFRALNQA+GRCIRH+ DYGAI+LLD RF N+ H+S+W+R SI
Sbjct: 655 SLLTGDQWYSQQAFRALNQAVGRCIRHKLDYGAIVLLDRRFSNTANQRHLSRWVRTSINV 714
Query: 723 YDSFDASLEGLKSFF 737
++SF +LE +K FF
Sbjct: 715 HESFAPALESMKEFF 729
>gi|198429884|ref|XP_002120239.1| PREDICTED: similar to BRIP1 [Ciona intestinalis]
Length = 1145
Score = 461 bits (1186), Expect = e-126, Method: Compositional matrix adjust.
Identities = 283/797 (35%), Positives = 418/797 (52%), Gaps = 130/797 (16%)
Query: 13 KPLNAYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLL 72
KP +GG+++ FP++PY SQL M ++ L R++ H LLESPTG+GK+LSLL
Sbjct: 5 KPHVELMIGGVKIHFPFKPYPSQLSMMSMIVKGLQRSE-----HCLLESPTGSGKTLSLL 59
Query: 73 CSTLAWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVA 132
CS LAWQQ+ ++ Q + + + + + E PP
Sbjct: 60 CSALAWQQDLAMRLQKKEELYEQSNVDCAEE----------ECCSIEQPPK--------- 100
Query: 133 MNNKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYR-VPMAVLASRKHYCTNKYVRDKE 191
+K+ PTI++ +RTH QI+Q+ E T YR V M++L+SR+H C + +
Sbjct: 101 ------EKEKVPTIWFGTRTHKQIAQITHELATTQYRHVNMSILSSREHACIHPLNSQSK 154
Query: 192 NIDEECKLLLGDRN-----LGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRG 246
+E CK L + C ++NV+++R H SL+ G + D+EDLV +G V+
Sbjct: 155 TKNEGCKELRKGIHPDLPGTHCIFYQNVNRLRSHASLKNCGITQAWDLEDLVKLGTRVKS 214
Query: 247 CSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVD 306
C YYAAR + A ++FCPY+Y+I+P IR +M++D++ I+ILDEAHNIED +R+A S
Sbjct: 215 CPYYAARELQKTASIIFCPYNYLIDPSIRSSMQIDLQNDIVILDEAHNIEDSSREAASFT 274
Query: 307 IDEDVLLKLQMELEQVCSVNPMI--YQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWT 364
E L+ +LE + SV + +Q L + + GW+ + L + ++ + WT
Sbjct: 275 AVETDLMSTVADLEHLISVESNVEEHQKLHLVLSKMGGWMNKHVKDLKESAYETWSKVWT 334
Query: 365 GDKALRELQEANISRQCFPILLECATKAIKEATDTESELPH------LSGMSVITLEGLF 418
G+ + L E I+ +L+E KA++ + E + + MS L LF
Sbjct: 335 GEDFIPHLDEWGITADTLSLLVEAFLKAVETKEEEEGGVEEEKKEMIMHSMSKSFLGALF 394
Query: 419 SSLTYFFSRNGSHVSDYQLALQKYIK---------RD-----SKNPGGNWTHTLSLWCLN 464
LTY + + DY++ + + + RD +K + L WCLN
Sbjct: 395 DVLTYILASSKKFAGDYRVTMIRTAQFGIPPPKRTRDGWVTINKRKSKFFLLKLHFWCLN 454
Query: 465 PAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTG 524
PAV F D+A+ + IILTSGTLSPM+SFSSELG+ F LEA HVI + QV + G
Sbjct: 455 PAVAFTDLAD-TRCIILTSGTLSPMSSFSSELGLAFPIQLEAAHVIS-NSQVFVGSLGCG 512
Query: 525 PDNYPLNASYKTAD----------------------------GYKLMEKLCNRWRETGQW 556
P+ + L A+Y+ + YK++EKLC RW+ TG W
Sbjct: 513 PNGHRLQATYQNTNSLDFQDELGKLVQSVCNVVPYGVLCFFSSYKMLEKLCERWKNTGLW 572
Query: 557 SRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQ 616
+ KK + EP G ++ DF+ VL+++Y+++ A+V G +DL
Sbjct: 573 YDICQKKEIVCEPHGRNKADFDGVLQNFYHTV------AMV--------GTSDLT----- 613
Query: 617 ENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKKYNDTYRSS 661
GA FLAVCRGK I VGIPFPN D QV LKK YN+ +
Sbjct: 614 ------GALFLAVCRGKASEGLDFANNNARAVITVGIPFPNYRDKQVELKKTYNNFHCQD 667
Query: 662 KNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERF-QEERNRAH-ISKWLRKS 719
+ LL+GN+WY QAFRALNQA+GRCIRHR D+GA+I++D+RF Q R +SKW+R+
Sbjct: 668 RGLLTGNDWYEIQAFRALNQALGRCIRHRNDWGALIIVDDRFCQNPRKYCKGLSKWVRQK 727
Query: 720 IKQYDSFDASLEGLKSF 736
+K YD F E L +F
Sbjct: 728 VKSYDKFKVFEESLANF 744
>gi|405960555|gb|EKC26471.1| Fanconi anemia group J protein [Crassostrea gigas]
Length = 1410
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 288/843 (34%), Positives = 428/843 (50%), Gaps = 158/843 (18%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ G++V FP +PY SQ M +VI ++R + + LLESPTG+GKSL+LLCS LAWQ
Sbjct: 26 IHGVEVVFPCKPYPSQFSMMEKVIKGIERRE-----NCLLESPTGSGKSLALLCSALAWQ 80
Query: 80 -----QNCKLKNQLANISHSKPDTEAVTDPL--------ANGGGFIPES----QPSTI-- 120
N K Q +N TE+++ L A+ F + QP T
Sbjct: 81 TAEYSHNNKKSLQDSNSGCMDHKTESLSTWLWSVLNAVSASPSAFDDDDDDFKQPGTFRT 140
Query: 121 -------------------PP----STNGQTAQVAM-----NNKNVKKKMTPTIFYASRT 152
PP STN + + + K + P I++ +RT
Sbjct: 141 PGNTKQNARPYVSISYETSPPECEQSTNSGSPDTSKPCTCGADSAPKARKVPKIYFGTRT 200
Query: 153 HSQISQVISEYKKTAYR-VPMAVLASRKHYCTNKYVRDKENIDEECKLLLGDRNLGCPQF 211
H QI+Q+I E KKTAYR V M +LA+R+H C + V + +E CK LL GC +F
Sbjct: 201 HKQIAQIIRELKKTAYREVKMTILAAREHTCIHPAVSQMKGKNEGCKELLD--GPGC-KF 257
Query: 212 KNVHKVRGHPSLQ----KGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYS 267
+ +++ P+ Q K G E DIED V + + ++ C Y+A R + A +VFCPY+
Sbjct: 258 ND--RLKRMPATQDYVKKQGLTEAWDIEDFVGLSKNIKVCPYFATRGLRSGADIVFCPYN 315
Query: 268 YIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQVCSVNP 327
Y+I+PVIR +ME+ +K ++ILDEAHN+ED +RD+ I +D L K EL+++
Sbjct: 316 YLIDPVIRKSMEISLKDQVVILDEAHNMEDTSRDSAGEKIGDDALEKAVNELDEMIKYEI 375
Query: 328 MIYQPL--IEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRELQEANISRQCFPIL 385
+ + L ++ L+G I + L +F H + CW+ + L++ + F +
Sbjct: 376 LTAEHLRVRQLCAGLLGLIRDNQDNLQNMDFDHEYKCWSSYDIVVRLEKIGAGPKHFQDM 435
Query: 386 LECATKAIKEATDTESELPHLSGMSVI-------TLEGLFSSLTYFFSRNGSHVSDYQLA 438
+ +EA D E+ + +SG V TLE + LTY + + +V+DY++A
Sbjct: 436 QQHLKAVFEEALDKETVVKDMSGRVVKISSATLQTLEHIVKVLTYLYKDDLKYVTDYRMA 495
Query: 439 LQKYIKRDSKNPGGN--WTH----------------TLSLWCLNPAVVFKDVAELSLSII 480
+ K ++NP + W + TL+ WC+NP V F D++ + S++
Sbjct: 496 VVKATVY-TRNPNTDDMWLNSKRRRGGQSMIPTTQLTLNFWCMNPGVAFSDLS-VCRSVV 553
Query: 481 LTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTAD-- 538
LTSGTLSP+NSF SELGV F LEA HVI+ D QV + GP L A Y++ +
Sbjct: 554 LTSGTLSPINSFESELGVPFPIKLEANHVIE-DKQVWVGAVGQGPRGGTLEAVYRSVETL 612
Query: 539 --------------------------GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGG 572
Y + KL NRW TG W R+ K + VEP+
Sbjct: 613 QFQDELGDLVLRVCQHVPHGVLCFVPSYSTLSKLRNRWEITGLWERIKEHKEVMVEPRSS 672
Query: 573 SQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRG 632
+ DFE +++ +Y+S+ N ++ Q K GA F+AV RG
Sbjct: 673 ERVDFEDIMRQFYDSV----------------------NMLQDQTEGKKTGALFVAVFRG 710
Query: 633 K---------------IVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFR 677
K I VGIP+PN D+QV K++YN+ YR S+ LLSG+EWY QAFR
Sbjct: 711 KVSEGMDFADNYARAVITVGIPYPNSKDVQVKYKQEYNNMYRLSRGLLSGSEWYDIQAFR 770
Query: 678 ALNQAIGRCIRHRFDYGAIILLDERFQEERNRAH-ISKWLRKSIKQYDSFDASLEGLKSF 736
ALNQA+GRCIRHR D+GAIIL+D RF +N+ +SKW+R+ + Y +FD+++ + F
Sbjct: 771 ALNQALGRCIRHRKDWGAIILVDNRFVRNQNKVQGLSKWVRRKVHTYQTFDSAITSIDKF 830
Query: 737 FRD 739
+D
Sbjct: 831 TKD 833
>gi|160333450|ref|NP_001103766.1| BRCA1 interacting protein C-terminal helicase 1 [Danio rerio]
gi|126843119|gb|ABO27623.1| Fanconi anemia J [Danio rerio]
Length = 1217
Score = 438 bits (1126), Expect = e-119, Method: Compositional matrix adjust.
Identities = 247/678 (36%), Positives = 368/678 (54%), Gaps = 101/678 (14%)
Query: 144 PTIFYASRTHSQISQVISEYKKTAYR-VPMAVLASRKHYCTNKYVRDKENIDEECKLLLG 202
P IF+ +RTH QI+Q+ E K+T Y VPM +L+SR H C + V N +E CK L
Sbjct: 272 PKIFFGTRTHKQITQIARELKRTLYSTVPMTILSSRDHTCVHPEVVPHANRNERCKEFLE 331
Query: 203 DRN-LGCPQFKNVHKVRGHPSLQ-KGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQ 260
+N C + NVHK+R +LQ G H+ DIE+LV +G +R C+YYAAR + +A
Sbjct: 332 AKNGRSCRYYHNVHKMRDQSTLQWVHGLHQAWDIEELVRLGGKLRSCAYYAARELMQEAC 391
Query: 261 LVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELE 320
+VFCPY+Y+++P+IR +ME+++K I++LDEAHNIED AR++ S +++ LL + E++
Sbjct: 392 IVFCPYNYLLDPLIRESMEINLKEQIVVLDEAHNIEDCARESASFTLNQAQLLLARDEID 451
Query: 321 QVCSVNPMI--YQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRELQEANIS 378
+ + N ++PL+ L W++ L +RE++ WTG + L + I+
Sbjct: 452 GMVTHNIRRDQHRPLLAFCCSLTNWVQESCGGLEEREYESSCKVWTGVEVLGIFRGLGIT 511
Query: 379 RQCFPILLECATKAIKE--------ATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGS 430
FP+L + +++ + ++P +S + L+ LF L + F +N
Sbjct: 512 ADTFPLLQKNLAAVLEKEERVGLVNGREETVQVPTISSNTQSMLKSLFMVLEFLFRQNCR 571
Query: 431 HVSDYQLALQK-YI------------------KRDSKNPGGNWTHTLSLWCLNPAVVFKD 471
DY++ALQ+ Y+ +R N HTLS WCLNPAV F D
Sbjct: 572 FADDYRVALQQSYMWTTQQDLPDAQGFFARPHRRRQSNRTKTLVHTLSFWCLNPAVAFSD 631
Query: 472 VAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLN 531
++ SI+LTSGTLSPM SFSSELG++F LEA HVI+ QV I GP L
Sbjct: 632 LSSTVRSIVLTSGTLSPMGSFSSELGIKFSIQLEANHVINKS-QVWVGTIGAGPQGRKLC 690
Query: 532 ASYKTAD----------------------------GYKLMEKLCNRWRETGQWSRLNAKK 563
A+++ A+ YK+++KL +RW TG W +L K
Sbjct: 691 ATFQHAETFAFQDEVGALLLKVCHTVSRGVLCFLPSYKMLDKLRDRWTNTGLWDKLEECK 750
Query: 564 PLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKG 623
+ EP+GG + DF+ +L+ YY +I R K E + G
Sbjct: 751 TVITEPRGGGKGDFDELLQTYYEAI---------RGTAAKGE--------------KRDG 787
Query: 624 ASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSGN 668
A +AVCRGK + +GIPFPNI D+QV LK KYND + S+ LL G
Sbjct: 788 ALLVAVCRGKVSEGLDFTDDNARAVVTIGIPFPNIKDLQVELKMKYNDKHAKSRGLLPGG 847
Query: 669 EWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNR--AHISKWLRKSIKQYDSF 726
WY QA+RALNQA+GRCIRHR D+GA+IL+D+RF+ N+ +SKW+R+ ++ +D+F
Sbjct: 848 RWYEIQAYRALNQALGRCIRHRNDWGALILVDDRFRTNPNKYITGLSKWVRQLVRHHDTF 907
Query: 727 DASLEGLKSFFRDVKGWV 744
+++ L+SF + +G V
Sbjct: 908 TGAMQSLESFSQGQRGAV 925
Score = 75.1 bits (183), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 50/87 (57%), Gaps = 5/87 (5%)
Query: 18 YHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLA 77
Y +GG+++ FP + Y SQL M +I L+ Q H LLESPTG+GKSL+LLCS LA
Sbjct: 8 YTIGGVKINFPCKAYPSQLAMMNSIIRGLNNGQ-----HCLLESPTGSGKSLALLCSALA 62
Query: 78 WQQNCKLKNQLANISHSKPDTEAVTDP 104
WQQ +K Q A + V P
Sbjct: 63 WQQAQFVKEQDAGTGFADCKKSGVVTP 89
>gi|452822263|gb|EME29284.1| putative DNA helicase required for mitotic chromosome segregation
CHL1 [Galdieria sulphuraria]
Length = 984
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 275/829 (33%), Positives = 414/829 (49%), Gaps = 146/829 (17%)
Query: 18 YHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLA 77
+ V G ++EFPY+PY Q VFM +++ + +Q +ALLESPTGTGKSL+LLC+ LA
Sbjct: 3 FQVYGTEIEFPYEPYPVQFVFMEKILRACENSQ-----NALLESPTGTGKSLALLCAVLA 57
Query: 78 WQQNCKLKNQLANISH---SKPDTEAVTDPLANGGGFIPESQP----------------- 117
WQ+ K K QL I K +A +G G P +
Sbjct: 58 WQKKTKNKMQLERIEKENIGKQRFDAAVAKYRHGRGKEPLADTFQDNQTNRHMEKRDLDN 117
Query: 118 --------------------STIPPSTNGQTAQVAMNNKNVKKKMTP-TIFYASRTHSQI 156
TI ++ NN + K++ P IF+A+RTH+QI
Sbjct: 118 CLEEKSISSDDDFQQGIGTNQTIDSDSDDWITHDEDNNLDSDKEIIPPKIFFATRTHTQI 177
Query: 157 SQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEECKLLLGDRNLGCPQFKNVHK 216
QV+ E ++T+YR M +L SR YC + V +N +EECK LL +R+ C V K
Sbjct: 178 DQVVQELRRTSYRPKMDILGSRDRYCIHNKVIRSQNRNEECKKLLEERS--CSYAFGVEK 235
Query: 217 VRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRG 276
V L + H+V DIEDLV +G+ C Y++++ + A+L+FCPYSY+++PV+R
Sbjct: 236 VHNIKELSENHIHQVWDIEDLVRIGKRHNLCPYFSSQELMKTAELIFCPYSYLLDPVVRN 295
Query: 277 AMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQV-CSVNPMIYQPLI- 334
AM+V++ +I+ILDEAHNIED+ R+A S ++ + L +++ ELE + + N + + L
Sbjct: 296 AMQVELSNSIVILDEAHNIEDVCREAASCEVFIEELEQVRTELETLDMNQNTSMGRHLSL 355
Query: 335 --EMTQDLVGWIERRKA----TLAKREFQ-HFFSCWTGDKALRELQEANISRQCFPILLE 387
++ W + A + K +F+ FSC TG L L+ +++ + +
Sbjct: 356 VNSFVSGVISWCHEQDAHQKFVVDKSDFEKETFSC-TGKLLLDALECCGVTKTIYSEIRR 414
Query: 388 CATKAIK---------EATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLA 438
++ + T T+ + L + ITLE L L + F+ + D+ L
Sbjct: 415 SVSRITNTELFLSEHLDETSTKKKRVGLPEWASITLERLMCPLEFIFNSSVDRSDDFLLV 474
Query: 439 LQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGV 498
L K K G W+ L LWC NPAV F + S I+L+SGTL+PM+SFSSELG+
Sbjct: 475 LMKTRK------GTMWSFKLCLWCFNPAVSFSYLQSHSRCIVLSSGTLTPMDSFSSELGI 528
Query: 499 QFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTA--------------------- 537
F PHVIDV QV S GP++ ++++ +
Sbjct: 529 HFDIMNSLPHVIDVKNQVCAIASSCGPNSVDYDSTFAASSSIAYHDCLGQSILEYCRVIP 588
Query: 538 DG-------YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQ 590
DG Y+L+E + RWR++G W L + K +F+EP + F+ +L YY++I +
Sbjct: 589 DGVICFFPSYRLLESVVRRWRQSGYWKELESCKQVFIEPCQNDRVYFDNILLSYYHAIHK 648
Query: 591 GSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGK---------------IV 635
K+GA FLAVCRGK I+
Sbjct: 649 ------------------------------KQGALFLAVCRGKVSEGIDFKDEYARGVII 678
Query: 636 VGIPFPNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGA 695
VG+P+PN+ D+QV KK+YND Y +S+ LL+G WY QAFR+LNQAIGRCIRH+ DYG
Sbjct: 679 VGLPYPNLRDLQVIQKKEYNDRYSASRKLLNGQRWYALQAFRSLNQAIGRCIRHKNDYGV 738
Query: 696 IILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFRDVKGWV 744
I+LLD+R+ ++ KWL I+ + ++ + F V+ V
Sbjct: 739 IVLLDKRYTRHETLRNLPKWLAHQIRIATYHEVAISMISHFIPQVEARV 787
>gi|224076637|ref|XP_002196566.1| PREDICTED: Fanconi anemia group J protein homolog [Taeniopygia
guttata]
Length = 1249
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 249/685 (36%), Positives = 376/685 (54%), Gaps = 107/685 (15%)
Query: 136 KNVKKKMTPTIFYASRTHSQISQVISEYKKTAYR-VPMAVLASRKHYCTNKYVRDKENID 194
+N + P IF+ +RTH QI+Q+ E K+TAY VPM +L+SR + C + V + N +
Sbjct: 248 ENGDRLCVPKIFFGTRTHKQITQISRELKRTAYSSVPMTILSSRDYTCIHPVVSNSSNRN 307
Query: 195 EEC-KLLLGDRNLGCPQFKNVHKVRGHPSLQ-KGGCHEVHDIEDLVNVGQVVRGCSYYAA 252
E C +LL G C + VHK+ +LQ G + DIEDLV++G+ +R C Y+AA
Sbjct: 308 EMCVELLEGKHGKSCSYYHGVHKLSEQHALQPAAGLCQAWDIEDLVSLGRKLRACPYFAA 367
Query: 253 RSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVL 312
R + A +VFCPY+Y+++P IR +M++++K ++ILDEAHNIED AR++ S + E L
Sbjct: 368 RELMVGADIVFCPYNYLLDPQIRDSMDINLKDQVVILDEAHNIEDCARESVSYGVTERQL 427
Query: 313 LKLQMELEQVCSVN--PMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALR 370
+ EL+ + + N ++PL + L+ W++ L +R ++ W+G + L
Sbjct: 428 QAAREELDFMVNSNIRQKHHEPLRAVCCSLINWLQESSGQLVERAYETACKVWSGKEMLN 487
Query: 371 ELQEANISRQCFPIL-------LECATKAIKEATDTESELPHLSGMSVITLEGLFSSLTY 423
L + I+ FPIL LE K + E+P +S + I L+GLF L+
Sbjct: 488 FLYKMGITGITFPILQKHLAAVLEKEEKVSMHGREELIEVPVVSPAAQIVLKGLFMVLSC 547
Query: 424 FFSRNGSHVSDYQLALQK---YIKRDSKNPGG-----------------NWTHTLSLWCL 463
F N DY++ALQ+ ++ D ++ H L+ WCL
Sbjct: 548 LFKENSRFADDYRVALQQTYTWMTEDQRDDADTSSFFMRPKHKKSSRQKTLVHMLNFWCL 607
Query: 464 NPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVIST 523
NPAV F D+ E+ +I+LTSGTLSPM+SFSSELGV+F LEA HVI + QV +
Sbjct: 608 NPAVAFSDLNEVR-TIVLTSGTLSPMDSFSSELGVKFSIQLEANHVIQ-NSQVWVGTVGV 665
Query: 524 GPDNYPLNASYKTAD----------------------------GYKLMEKLCNRWRETGQ 555
GP+ L A+++ + YK+++KL +RW TG
Sbjct: 666 GPNGRKLCATFQHTETFEFQDEVGALLLSVCQTLGQGILCFLPSYKMLDKLKDRWMHTGL 725
Query: 556 WSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIES 615
W +L K + EP+GG++ DF+ +LK YY++I KC
Sbjct: 726 WRKLEDVKTVIAEPQGGAKSDFDELLKIYYDAI----KC--------------------- 760
Query: 616 QENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKKYNDTYRS 660
K GA +AVCRGK + +GIPFPN+ D+QV LK+KYND ++S
Sbjct: 761 --KGEKDGALLIAVCRGKVSEGLDFCDENARAVVTIGIPFPNVKDLQVELKRKYNDQHKS 818
Query: 661 SKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNR--AHISKWLRK 718
++ LLSG++WY QA+RALNQA+GRCIRHR D+GA+IL+D+RF++ N+ +SKW+R+
Sbjct: 819 TRGLLSGSQWYEIQAYRALNQALGRCIRHRNDWGALILVDDRFKKNPNKYITGLSKWIRQ 878
Query: 719 SIKQYDSFDASLEGLKSF-FRDVKG 742
I+ +D+F +LE L +F R+ +G
Sbjct: 879 QIQHHDTFGTALESLHAFALRNQRG 903
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 43/63 (68%), Gaps = 5/63 (7%)
Query: 18 YHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLA 77
Y +GG+++ FP + Y SQL M ++ L+ Q H LLESPTG+GKSL+LLCS L+
Sbjct: 8 YTIGGVKILFPCKAYPSQLAMMNAIVKGLNSRQ-----HCLLESPTGSGKSLALLCSALS 62
Query: 78 WQQ 80
WQQ
Sbjct: 63 WQQ 65
>gi|449269835|gb|EMC80576.1| Fanconi anemia group J protein like protein [Columba livia]
Length = 1261
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 263/730 (36%), Positives = 396/730 (54%), Gaps = 122/730 (16%)
Query: 134 NNKNVKKK------MTPTIFYASRTHSQISQVISEYKKTAYR-VPMAVLASRKHYCTNKY 186
+ N KKK P I++ +RTH QISQ+ E K+TAY VPM +L+SR + C +
Sbjct: 240 DTSNTKKKESGDQSFIPKIYFGTRTHKQISQITRELKRTAYSSVPMTILSSRDYTCIHPV 299
Query: 187 VRDK-ENIDEEC-KLLLGDRNLGCPQFKNVHKVRGHPSLQKG-GCHEVHDIEDLVNVGQV 243
V + N +E C +LL G C + VHKV H LQ + DIEDLV++G+
Sbjct: 300 VSNSGSNRNEMCVELLEGKHGKSCLYYHGVHKVSEHHGLQSAHNMSQAWDIEDLVHLGKK 359
Query: 244 VRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAG 303
+R C Y+AAR + A +VFCPY+Y+++P IR +M++++KG ++ILDEAHNIED AR++
Sbjct: 360 LRACPYFAARELMVGADIVFCPYNYLLDPQIRESMDINLKGHVVILDEAHNIEDSARESV 419
Query: 304 SVDIDEDVLLKLQMELEQVC--SVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFS 361
S + E+ L Q EL+ + ++ M + PL + L W+ + L +R ++
Sbjct: 420 SYGVTENQLRAAQEELDFMVNNNIRQMDHGPLRAVCCSLTNWLRESSSQLVERGYETSCK 479
Query: 362 CWTGDKALRELQEANISRQCFPIL-------LECATKAIKEATDTESELPHLSGMSVITL 414
W+G + L L + I+ FPIL LE K + E+P +S + I L
Sbjct: 480 VWSGKEMLPILHQMGITGITFPILQKHLATVLEKEEKISVLGREELIEIPVVSPATQIVL 539
Query: 415 EGLFSSLTYFFSRNGSHVSDYQLALQK-YIKRDSKNPGGNWT------------------ 455
+GLF L + F N + DY++ALQ+ Y + P + T
Sbjct: 540 KGLFMVLLFLFKDNSRYADDYRVALQQTYAWMNENQPDVSETSALVTRPRHKRNLRQKTM 599
Query: 456 -HTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDL 514
H L+ WCLNPAV F D++++ +I+LTSGTLSPM+SFSSELGV+F LEA H+I +
Sbjct: 600 VHVLNFWCLNPAVAFSDLSDVR-TIVLTSGTLSPMDSFSSELGVKFSIQLEANHIIR-NS 657
Query: 515 QVLTSVISTGPDNYPLNASYKTAD----------------------------GYKLMEKL 546
QV + GP+ L A+++ + YKL++KL
Sbjct: 658 QVWVGTVGAGPNRRKLCATFQHTETFEFQDEVGALLLSVCQTVGQGILCFLPSYKLLDKL 717
Query: 547 CNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREG 606
+RW TG W L K + EP+GG++ DF+ +LK YY++I KC +G
Sbjct: 718 KDRWMHTGLWRNLELVKTVIAEPQGGAKSDFDELLKIYYDAI----KC----------KG 763
Query: 607 NNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLK 651
D GA +AVCRGK I +GIPFPN+ D+QV LK
Sbjct: 764 ERD-------------GALLIAVCRGKVSEGLDFCDENARAVITIGIPFPNVKDLQVELK 810
Query: 652 KKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNR-- 709
+KYND +++++ LL G++WY QA+RALNQA+GRCIRHR D+GA+IL+D+RF+ N+
Sbjct: 811 RKYNDQHKNTRGLLPGSQWYEIQAYRALNQALGRCIRHRNDWGALILVDDRFRNNPNKYI 870
Query: 710 AHISKWLRKSIKQYDSFDASLEGLKSFF-RDVKGWVGKKMFNGLENSDNDVDHVSSMDQC 768
+SKW+R+ I+ +++F ++LE L++F R+ KG + L ++ HV S
Sbjct: 871 TGLSKWIRQQIQHHENFSSALESLQAFATRNQKG------IDALSECSSEFPHVPS--NS 922
Query: 769 KEVTKQNTQE 778
K++++ + QE
Sbjct: 923 KDLSQASQQE 932
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 46/67 (68%), Gaps = 5/67 (7%)
Query: 15 LNAYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCS 74
++ Y +GG+++ FP + Y SQL M ++ L+ Q H LLESPTG+GKSL+LLCS
Sbjct: 5 VSEYTIGGVKIRFPCKAYPSQLAMMNAIVKGLNNRQ-----HCLLESPTGSGKSLALLCS 59
Query: 75 TLAWQQN 81
L+WQQ+
Sbjct: 60 ALSWQQS 66
>gi|431890862|gb|ELK01741.1| Fanconi anemia group J protein [Pteropus alecto]
Length = 1164
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 249/721 (34%), Positives = 382/721 (52%), Gaps = 110/721 (15%)
Query: 98 TEAVTDPLANGGGFIPE------SQPSTIPPSTNGQTAQVAMNNKNVKKKMTPTIFYASR 151
T + PL F P+ S+ NGQ + A+ K P I++ +R
Sbjct: 192 TTKLNSPLGKTNSFSPQKLSGHCSRCYCSTKQGNGQDSSNAIKKDQGAKSKIPKIYFGTR 251
Query: 152 THSQISQVISEYKKTAYR-VPMAVLASRKHYCTNKYVRDKENIDEEC-KLLLGDRNLGCP 209
TH QI+Q+ E ++TAY VPM +L+SR H C + V N +E+C +LL G C
Sbjct: 252 THKQIAQITRELRRTAYSGVPMTILSSRDHTCVHPEVVGNFNRNEKCMELLDGKNGKSCY 311
Query: 210 QFKNVHKVRGHPSLQK-GGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSY 268
+ VHK+ +LQ G ++ DIE+L+++G+ V+ C YY AR + ++A ++FCPY+Y
Sbjct: 312 FYHGVHKISDQHTLQTFQGMYKAWDIEELISLGKKVKACPYYTARELMENADIIFCPYNY 371
Query: 269 IINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQVC--SVN 326
+++ IR +M++++K ++ILDEAHNIED AR++ S + E L + EL+ + ++
Sbjct: 372 LLDAQIRESMDINLKEQVIILDEAHNIEDCARESASYSVTEVQLRFARDELDSMVNNNIR 431
Query: 327 PMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRELQEANISRQCFPILL 386
+ PL + L+ W+E L +R+++ W+G + L LQ+ I+ FPIL
Sbjct: 432 KKDHGPLRAVCYGLINWLEANSEHLVERDYESSCKIWSGSEMLLNLQKMGITTATFPILQ 491
Query: 387 ECATKAIKEATDTES--------ELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLA 438
+ +++ S E+P +S + I L+GLF L Y F +NG DY++A
Sbjct: 492 GHFSAVLQKEEKISSIHGKEEAREVPIISASTQIMLKGLFMVLDYLFRQNGRFADDYKVA 551
Query: 439 LQKYI----KRDSKNPGG--------------NWTHTLSLWCLNPAVVFKDVAELSLSII 480
+Q+ + D+ + G H L+ WCLNPAV F D+ + +I+
Sbjct: 552 IQQTYSWINQTDALDKNGFLVLPKNKKCLRQKTAVHVLNFWCLNPAVAFSDINDKVWTIV 611
Query: 481 LTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTAD-- 538
LTSGTLSPM SFSSELGV F LEA HVI+ + QV I +GP L A+++ +
Sbjct: 612 LTSGTLSPMKSFSSELGVTFTIQLEANHVIN-NSQVWVGTIGSGPKGQNLCATFQHTETF 670
Query: 539 --------------------------GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGG 572
YKL+EKL RW +TG W L K + +EP+ G
Sbjct: 671 AFQDEVGALLLSVCQTVSQGILCFLPSYKLLEKLKERWLDTGLWRDLELVKTVIIEPQRG 730
Query: 573 SQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRG 632
+ +F+ +L+ YY++I K +G D GA +AVCRG
Sbjct: 731 EKTNFDELLQVYYDAI--------------KYKGGKD-------------GALLVAVCRG 763
Query: 633 K---------------IVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFR 677
K I +GIPFPN+ D+QV LK++YND + + LL G +WY QA+R
Sbjct: 764 KVSEGLDFSDDNARAVITIGIPFPNVKDLQVELKRRYNDQHSQLRGLLPGRQWYEIQAYR 823
Query: 678 ALNQAIGRCIRHRFDYGAIILLDERFQEERNR--AHISKWLRKSIKQYDSFDASLEGLKS 735
ALNQA+GRCIRH+ D+GA+IL+D+RF+ NR + +SKW+R+ I+ + +F+++LE L
Sbjct: 824 ALNQALGRCIRHKNDWGALILVDDRFRSNPNRYISGLSKWIRQQIQHHSTFESALESLAE 883
Query: 736 F 736
F
Sbjct: 884 F 884
Score = 72.4 bits (176), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 44/64 (68%), Gaps = 5/64 (7%)
Query: 18 YHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLA 77
Y +GG+++ FP + Y SQL M ++ L+ Q H LLESPTG+GKSL+LLCS LA
Sbjct: 8 YTIGGVKINFPCKAYPSQLAMMNSIVRGLNNKQ-----HCLLESPTGSGKSLALLCSALA 62
Query: 78 WQQN 81
WQQ+
Sbjct: 63 WQQS 66
>gi|308806570|ref|XP_003080596.1| putative BRCA1 interacting protein C-terminal helicase 1 (ISS)
[Ostreococcus tauri]
gi|116059057|emb|CAL54764.1| putative BRCA1 interacting protein C-terminal helicase 1 (ISS)
[Ostreococcus tauri]
Length = 1045
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 277/820 (33%), Positives = 418/820 (50%), Gaps = 139/820 (16%)
Query: 3 SEANPNPNYRKPLNAYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESP 62
+++ P +R+ +N G+++ FP PY SQ+ M +VI RA C AL+ESP
Sbjct: 29 TQSTPGSTWRRMIN-----GVEIRFPLVPYASQIAVMSQVI----RAVTSKQC-ALVESP 78
Query: 63 TGTGKSLSLLCSTLAWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPP 122
TG+GKSL+LLCS LAW + S D T G G
Sbjct: 79 TGSGKSLALLCSALAWCEKMA----------SGEDEGWGTSGAERGAG------------ 116
Query: 123 STNGQTAQ---VAMNNKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYR-VPMAVLASR 178
+G+ A+ N + +K +TP +FYA+RTHSQI+QV+ E +T+Y+ VLASR
Sbjct: 117 --SGEMAEENRGGRNGRGRQKTLTPKVFYATRTHSQIAQVVGELARTSYKSARTVVLASR 174
Query: 179 KHYCTNKYVRDKENIDEECKLLL--GDRNLGCPQFKNVHKVRGHPSLQKGGCHEVH--DI 234
+HYC NK + N++EEC+ L+ GC H + L + ++V DI
Sbjct: 175 EHYCVNKSAKKSGNVNEECRKLMDVSAEGRGC-----YHAGKAASMLAEHAKNQVDPLDI 229
Query: 235 EDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHN 294
EDLV +G++ +GC Y+A++ MA+ A+LVFCPY+YI++P R AM++DI+G+++I DEAHN
Sbjct: 230 EDLVTLGRMKKGCPYFASKIMAESAELVFCPYNYILDPRTRAAMDIDIEGSLIIFDEAHN 289
Query: 295 IEDIARDAGSVDI-DEDVLLKLQM--ELEQVCSVNPMIYQPLIEMTQDLVGWIER----- 346
IED AR+A S + E++ ++ E+ + +VN + + L++ L W R
Sbjct: 290 IEDTAREAASEETWLEEIAYTVERLKEVRRRATVNLIETELLMKTMNGLYEWFLRFCDDS 349
Query: 347 RKATLAKREFQHFFSCWT---GDKALRELQEANISRQCFPILLECATKAIKEATDTESEL 403
++ Q F +C G+++L+ L+ ++R +++E K + +
Sbjct: 350 SDCYGLQQNPQAFETCSATIRGEQSLQALENIGLTRSSVSVVMEALVTVTKHNQENKDPK 409
Query: 404 PHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDS-----------KNPGG 452
+ G T E + + + + S+ + DY++ K I + K
Sbjct: 410 ERVPGGVFATCEKVLNPIRFLLSKGEATARDYRIVFTKTIDPERVATTQHKSSQLKRLPI 469
Query: 453 NWTHTLSLWCLNPAVVFKDVA--ELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVI 510
+ ++ W LNPA+ F+D+ + + S+ILTSGTL+P+NSF+SELGV+F LEA H I
Sbjct: 470 DEVVKINFWALNPALAFRDLVGEDGARSVILTSGTLAPLNSFASELGVEFPIRLEAQHCI 529
Query: 511 DVDLQVLTSVISTGPDNYPLNASYKTAD----------------------------GYKL 542
D+ QV SV+ GP+N P+NA +K+ Y L
Sbjct: 530 DMKRQVYGSVVGIGPNNVPMNAGFKSRSDYGFQDELGTSLKEWAQVTPHGMLMFFPSYSL 589
Query: 543 MEKLCNRWRETGQWSRLN--AKKPLFVEPKGGSQE------DFEIVLKHYYNSISQGSKC 594
M+ + RWRETG W + + K +F EP S E ++ YY++I++ +
Sbjct: 590 MDNIIRRWRETGMWQTIEKASGKRMFQEPSKSSHNYGKKPLTLEQIMVKYYDAIAKSVRA 649
Query: 595 AVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIP 639
A + E A +GA AVCRGK I VGIP
Sbjct: 650 A-------------KHPYAPAPETATCRGAILFAVCRGKISEGIDFADANARAVISVGIP 696
Query: 640 FPNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILL 699
+PNI D V+ K+ YND R + LLSG++WY QA+RALNQA+GRC+RHR D+GAIIL+
Sbjct: 697 YPNIKDSLVAEKRSYNDEGR-GQGLLSGSQWYDQQAYRALNQAVGRCLRHRHDHGAIILV 755
Query: 700 DERFQEERNRAHISKWLRKSIKQYDS--FDASLEGLKSFF 737
DERF +RN + KWLR +I F L LK FF
Sbjct: 756 DERFN-QRNIHSLPKWLRPAIVHNPGAQFADQLASLKQFF 794
>gi|74271901|ref|NP_001028230.1| Fanconi anemia group J protein homolog [Gallus gallus]
gi|78099252|sp|Q3YK19.1|FANCJ_CHICK RecName: Full=Fanconi anemia group J protein homolog; Short=Protein
FACJ; AltName: Full=ATP-dependent RNA helicase BRIP1
gi|72199300|gb|AAZ66861.1| BRIP1 [Gallus gallus]
Length = 1252
Score = 428 bits (1100), Expect = e-116, Method: Compositional matrix adjust.
Identities = 254/691 (36%), Positives = 374/691 (54%), Gaps = 114/691 (16%)
Query: 137 NVKKK------MTPTIFYASRTHSQISQVISEYKKTAYR-VPMAVLASRKHYCTNKYVRD 189
N KKK P IF+ +RTH QI+Q+ E K+TAY VPM +L+SR + C + V
Sbjct: 240 NTKKKANGDQTFIPKIFFGTRTHKQIAQITRELKRTAYSGVPMTILSSRDYTCIHPVVSS 299
Query: 190 -KENIDEEC-KLLLGDRNLGCPQFKNVHKVRGHPSLQKG-GCHEVHDIEDLVNVGQVVRG 246
N +E C +LL G C + VHK+ H +LQ ++ DIEDLV++G+ +R
Sbjct: 300 SNSNRNELCVELLEGKHGKSCLYYHGVHKLSEHYALQSAHNTYQAWDIEDLVSLGKKLRA 359
Query: 247 CSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVD 306
C Y+AAR + A +VFCPY+Y+++P IR +ME+++KG ++ILDEAHNIED AR+A S
Sbjct: 360 CPYFAARELMVGADIVFCPYNYLLDPQIRESMEINLKGQVVILDEAHNIEDSAREAVSYS 419
Query: 307 IDEDVLLKLQMELEQVC--SVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWT 364
+ E L + EL+ + ++ ++ L M L W+ + L + ++ W+
Sbjct: 420 VTESQLNAAREELDFMVNNNIRQKDHEQLRAMCCSLTNWLRESSSQLVETGYETSCKVWS 479
Query: 365 GDKALRELQEANISRQCFPIL-------LECATKAIKEATDTESELPHLSGMSVITLEGL 417
G + L + I+ FPIL LE K + E+P +S + I L+GL
Sbjct: 480 GKEMLNHFHDMGITNISFPILQKHLSAVLEKEEKISMFGKEELVEIPIVSSATQIVLKGL 539
Query: 418 FSSLTYFFSRNGSHVSDYQLALQK-YIKRDSKNPGGNWT-------------------HT 457
F L Y F N DY++ALQ+ Y + P + T H
Sbjct: 540 FMVLLYLFKDNSRFADDYRVALQQTYAWTNDNQPDVSDTSAFFTKTKHKRNLRHKTVVHM 599
Query: 458 LSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVL 517
L+ WCLNPAV F D+ ++ +++LTSGTLSPM+SFSSELGV+F LEA HVI + QV
Sbjct: 600 LNFWCLNPAVAFSDLNDVR-TVVLTSGTLSPMDSFSSELGVKFSIQLEANHVIR-NSQVW 657
Query: 518 TSVISTGPDNYPLNASYKTAD----------------------------GYKLMEKLCNR 549
I TGP+ L A+++ + YKL++KL +R
Sbjct: 658 VGTIGTGPNGRKLCATFQHTETFEFQDEVGALLLSVCQKVGQGILCFLPSYKLLDKLKDR 717
Query: 550 WRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNND 609
W TG W L K + EP+GG++ DF+ +LK YY++I K +G D
Sbjct: 718 WIHTGLWRNLELVKTVIAEPQGGAKSDFDELLKIYYDAI--------------KFKGEKD 763
Query: 610 LNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKKY 654
GA +AVCRGK I +GIPFPN+ D+QV LK+KY
Sbjct: 764 -------------GALLIAVCRGKVSEGLDFCDENARAVITIGIPFPNVKDLQVELKRKY 810
Query: 655 NDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNR--AHI 712
ND +++++ LL G++WY QA+RALNQA+GRCIRHR D+GA+IL+D+RF+ N+ +
Sbjct: 811 NDQHKTTRGLLPGSQWYEIQAYRALNQALGRCIRHRSDWGALILVDDRFRNNPNKYITGL 870
Query: 713 SKWLRKSIKQYDSFDASLEGLKSFF-RDVKG 742
SKW+R+ ++ +++F ++LE L +F R+ KG
Sbjct: 871 SKWIRQQVQHHENFGSALESLHAFAERNQKG 901
Score = 70.9 bits (172), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 49/74 (66%), Gaps = 5/74 (6%)
Query: 15 LNAYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCS 74
++ Y +GG+++ FP + Y SQL M ++ L+ Q H LLESPTG+GKSL+LLCS
Sbjct: 5 VSQYTIGGVKIMFPCKAYPSQLAMMNAIVKGLNNRQ-----HCLLESPTGSGKSLALLCS 59
Query: 75 TLAWQQNCKLKNQL 88
L+WQQ+ K+ L
Sbjct: 60 ALSWQQSLYEKSLL 73
>gi|432894997|ref|XP_004076035.1| PREDICTED: Fanconi anemia group J protein homolog [Oryzias latipes]
Length = 1273
Score = 428 bits (1100), Expect = e-116, Method: Compositional matrix adjust.
Identities = 253/711 (35%), Positives = 373/711 (52%), Gaps = 112/711 (15%)
Query: 108 GGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKKMTPTIFYASRTHSQISQVISEYKKTA 167
GG +PE ST + A ++K K P IF+ +RTH QI+Q+ E K+T
Sbjct: 276 GGAKVPEPCSRCPCASTKDTVKEKAKDDK----KRIPKIFFGTRTHKQITQIAHELKRTV 331
Query: 168 YR-VPMAVLASRKHYCTNKYVRDKENIDEECKLLLGDRN-LGCPQFKNVHKVRGHPSLQK 225
Y V M +L+SR H C N V N +E CK LL +N C + V K+R H +LQ+
Sbjct: 332 YSSVHMTILSSRDHTCVNPEVVPHFNRNERCKDLLEAKNGKSCRFYHGVQKMRDHHTLQR 391
Query: 226 -GGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKG 284
G HE D+EDLV V + +R CSYYAAR + A ++FCPY+Y+++P+IR +ME+D+ G
Sbjct: 392 VHGLHEAWDVEDLVTVAKRLRSCSYYAARELMQGASIIFCPYNYLLDPMIRESMEIDLAG 451
Query: 285 AILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQVC--SVNPMIYQPLIEMTQDLVG 342
IL+LDEAHNIED AR++ S +DE L + EL+ + ++ ++PL + L+
Sbjct: 452 QILVLDEAHNIEDCARESTSFTLDESSLKTCREELDSMVKNNIRRSQHEPLRDFCYALIN 511
Query: 343 WIERRKATLAKREFQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKE------- 395
WI+ + L++R ++ W+G L I+ F IL + +++
Sbjct: 512 WIQECQVLLSERGYESASKVWSGKDILGIFYGLGITADTFRILKQNLAAVLEKEERVGLV 571
Query: 396 -ATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQK------YIKRDSK 448
+ ++P +S M+ L+ LF L + + N DY++ALQ+ + D
Sbjct: 572 HGKEDMVQVPTISSMTSTVLKNLFMVLDFLYRDNCRFAEDYKVALQRSYSWTNQVPPDVP 631
Query: 449 NPGGNWTH----------------TLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSF 492
+ G TLS WCLNPAV F D++ SI+LTSGTLSPM SF
Sbjct: 632 DAQGFLVRPRPRRRQTARVKTEILTLSFWCLNPAVAFSDLSGSVRSIVLTSGTLSPMGSF 691
Query: 493 SSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTAD-------------- 538
SSELGV+F LEA HVI+ QV + GP L A+++ +
Sbjct: 692 SSELGVKFSIQLEANHVINKS-QVWVGTVGAGPQGKKLCATFQHTETYAFQDEVGDLLLH 750
Query: 539 --------------GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHY 584
YKL++KL +RW TG W +L +K + EP+GG++ DF+ +L+ Y
Sbjct: 751 ICKVIAKGVLCFLPSYKLLDKLRDRWSNTGLWEKLEQQKTVITEPRGGAKGDFDELLQTY 810
Query: 585 YNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGK----------- 633
Y++I KC R GA +AVCRGK
Sbjct: 811 YDAI----KCCDER-----------------------DGALLIAVCRGKVSEGLDFTDDN 843
Query: 634 ----IVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRH 689
+ +GIPFPNI D+QV LK KYND + S+ LL G+ WY QA+RALNQA+GRCIRH
Sbjct: 844 ARAVVTIGIPFPNIKDLQVELKMKYNDQHCKSRGLLPGHRWYEIQAYRALNQALGRCIRH 903
Query: 690 RFDYGAIILLDERFQEERNR--AHISKWLRKSIKQYDSFDASLEGLKSFFR 738
+ D+GA+IL+D+R+ N+ +SKW+R+ ++ + +F +++ LK+F R
Sbjct: 904 KNDWGALILVDDRYGNNPNKYITGLSKWVRQLVQHHYTFSNAMQSLKAFSR 954
Score = 71.6 bits (174), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 44/63 (69%), Gaps = 5/63 (7%)
Query: 18 YHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLA 77
Y +GG+++ FP + Y SQL M ++ L+ Q H LLESPTG+GKSL+LLCSTLA
Sbjct: 8 YTIGGVKIHFPCKAYPSQLSMMNSIVRGLNYGQ-----HCLLESPTGSGKSLALLCSTLA 62
Query: 78 WQQ 80
WQ+
Sbjct: 63 WQR 65
>gi|301777952|ref|XP_002924394.1| PREDICTED: Fanconi anemia group J protein-like [Ailuropoda
melanoleuca]
gi|281342514|gb|EFB18098.1| hypothetical protein PANDA_013720 [Ailuropoda melanoleuca]
Length = 1249
Score = 427 bits (1099), Expect = e-116, Method: Compositional matrix adjust.
Identities = 253/731 (34%), Positives = 388/731 (53%), Gaps = 112/731 (15%)
Query: 98 TEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKK------MTPTIFYASR 151
T + PL F P++ P + ++ N KK P I++ +R
Sbjct: 192 TTKLNSPLGKKNSFSPQNPPGPCSRCCCSTKQGSSQDSSNTTKKDHGGKSKIPKIYFGTR 251
Query: 152 THSQISQVISEYKKTAYR-VPMAVLASRKHYCTNKYVRDKENIDEEC-KLLLGDRNLGCP 209
TH QI+Q+ E ++TAY VPM +L+SR H C + V N +E+C +LL G C
Sbjct: 252 THKQIAQITRELRRTAYSGVPMTILSSRDHTCVHPEVVGNFNRNEKCMELLDGKNGKSCY 311
Query: 210 QFKNVHKVRGHPSLQ--KGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYS 267
+ VHK+ +LQ +G C + DIE+LV++G+ ++ C YY AR + +DA ++FCPY+
Sbjct: 312 FYHGVHKISDQHTLQTLQGMC-KAWDIEELVSLGKKLKACPYYTARELIEDAHIIFCPYN 370
Query: 268 YIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQVC--SV 325
Y+++ IR +M++++K I+ILDEAHNIED AR++ S + E L + EL+ + ++
Sbjct: 371 YLLDAQIRESMDINLKEQIVILDEAHNIEDCARESASYSVTEVQLRFARDELDSMVNNNI 430
Query: 326 NPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRELQEANISRQCFPIL 385
++PL + L+ W+E L +R+++ W+G + L L + I+ FPIL
Sbjct: 431 RKKDHEPLRAVCYSLINWLEANSEHLVERDYESSCKIWSGSEMLLNLHKMGITTATFPIL 490
Query: 386 -------LECATKAIKEATDTESEL-PHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQL 437
L+ K + ES + P +S + I L+GLF Y F +N DY++
Sbjct: 491 QGHFSAVLQKEEKVLPIHGKEESRIVPIISASTQIMLKGLFMVFDYLFRQNSRFADDYKV 550
Query: 438 ALQK---YIKR-DSKNPGGNW--------------THTLSLWCLNPAVVFKDVAELSLSI 479
A+Q+ +I + D+ + G + H L+ WCLNPAV F D++ +I
Sbjct: 551 AIQQTYSWINQIDTSDKNGFFALAKNKKRSRQKTAVHVLNFWCLNPAVAFSDISGKVWTI 610
Query: 480 ILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTAD- 538
+LTSGTLSPM SFSSELGV F LEA HVI+ + QV I +GP L A+++ +
Sbjct: 611 VLTSGTLSPMKSFSSELGVTFTIQLEANHVIN-NSQVWVGTIGSGPKGRNLCATFQHTET 669
Query: 539 ---------------------------GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKG 571
YKL+EKL RW +TG W L K + VEP+G
Sbjct: 670 FEFQDEVGELLLSVCQTVSQGILCFLPSYKLLEKLKERWLDTGLWDNLELVKTVIVEPQG 729
Query: 572 GSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCR 631
G + DF+ +L+ YY++I K +G D GA +AVCR
Sbjct: 730 GEKTDFDELLQVYYDAI--------------KYKGEKD-------------GALLVAVCR 762
Query: 632 GK---------------IVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAF 676
GK I +GIPFPN+ D+QV LK++YND + + LL G +WY QA+
Sbjct: 763 GKVSEGLDFSDDNARAVITIGIPFPNVKDLQVELKRQYNDQHSKLRGLLPGRQWYEIQAY 822
Query: 677 RALNQAIGRCIRHRFDYGAIILLDERFQEERNR--AHISKWLRKSIKQYDSFDASLEGLK 734
RALNQA+GRCIRH+ D+GA+IL+D+RF+ +R + +SKW+R+ I+ + +F+++LE L
Sbjct: 823 RALNQALGRCIRHKNDWGALILVDDRFRSNPSRYISGLSKWVRQQIQHHSTFESALESLT 882
Query: 735 SFFRDVKGWVG 745
F + + +G
Sbjct: 883 EFSKKHQKVIG 893
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 45/64 (70%), Gaps = 5/64 (7%)
Query: 18 YHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLA 77
Y +GG+++ FPY+ Y SQL M ++ L+ Q H LLESPTG+GKSL+LLCS LA
Sbjct: 8 YTIGGVKITFPYKAYPSQLAMMNSIVRGLNSKQ-----HCLLESPTGSGKSLALLCSALA 62
Query: 78 WQQN 81
WQQ+
Sbjct: 63 WQQS 66
>gi|403274761|ref|XP_003929130.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group J protein
[Saimiri boliviensis boliviensis]
Length = 1252
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 258/754 (34%), Positives = 395/754 (52%), Gaps = 114/754 (15%)
Query: 98 TEAVTDPLANGGGFIPESQP---STIPPSTNGQTAQVAMNN---KNVKKKMTPTIFYASR 151
T + PL N P+ P S ST +Q ++N + K P I++ +R
Sbjct: 192 TIKLNSPLGNINSLSPQKPPGHCSRCCCSTKQGNSQESLNTIKKDHTGKSKIPKIYFGTR 251
Query: 152 THSQISQVISEYKKTAYR-VPMAVLASRKHYCTNKYVRDKENIDEEC-KLLLGDRNLGCP 209
TH QI+Q+ E ++TAY VPM +L+SR H C + V N +E+C +LL G C
Sbjct: 252 THKQIAQITRELRRTAYSGVPMTILSSRDHTCIHPEVVGNFNRNEKCMELLDGKNGKSCY 311
Query: 210 QFKNVHKVRGHPSLQ--KGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYS 267
+ VHK+ +LQ +G C + DIE+LV++G+ +R C YY AR + DA ++FCPY+
Sbjct: 312 FYHGVHKISDQHTLQTFQGMC-KAWDIEELVSLGKKLRVCPYYTARELIQDADIIFCPYN 370
Query: 268 YIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQVC--SV 325
Y+++ IR M++++K ++ILDEAHNIED AR++ S + E L + EL+ + ++
Sbjct: 371 YLLDAQIRETMDLNLKEQVVILDEAHNIEDCARESASYSVTEVQLRFARDELDSMVNNNI 430
Query: 326 NPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRELQEANISRQCFPIL 385
++PL + L+ W+E L +R+++ W+G++ L L + I+ FPIL
Sbjct: 431 RKKDHEPLRAVCYSLINWLEANSEYLVERDYESSCKIWSGNEMLLNLHKMGITTATFPIL 490
Query: 386 LECATKAIKE--------ATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQL 437
+ +++ + E+P +S + I L+GLF L Y F N DY++
Sbjct: 491 QGHFSAVLQKEEKISPIYGKEEAREVPIISASTQIMLKGLFMVLDYLFRHNSKFADDYKI 550
Query: 438 ALQKYI------------------KRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSI 479
A+Q+ K ++ H L+ WCLNPAV F D+ +I
Sbjct: 551 AIQQTYSWTNQIDISDKNGWLVLPKNKKRSRQKTAVHVLNFWCLNPAVAFSDINGKVRTI 610
Query: 480 ILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTAD- 538
+LTSGTLSPM SFSSELGV F LEA HVI + QV I +GP L A+++ +
Sbjct: 611 VLTSGTLSPMKSFSSELGVTFTIQLEANHVIK-NSQVWVGTIGSGPKGRNLCATFQNTET 669
Query: 539 ---------------------------GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKG 571
YKL+EKL RW TG W +L K + VEP+G
Sbjct: 670 FEFQDEVGALLLSVCQTVSQGILCFLPSYKLLEKLRERWLSTGLWHKLELAKTVIVEPQG 729
Query: 572 GSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCR 631
G + DF+ +L+ YY++ VK +G D GA +AVCR
Sbjct: 730 GEKTDFDELLQVYYDA--------------VKYKGEKD-------------GALLVAVCR 762
Query: 632 GK---------------IVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAF 676
GK I +GIPFPN+ D+QV LK++YND + + LL G +WY QA+
Sbjct: 763 GKVSEGLDFSDDNARAVITIGIPFPNVKDLQVELKRQYNDHHSKLRGLLPGRQWYEIQAY 822
Query: 677 RALNQAIGRCIRHRFDYGAIILLDERFQEERNR--AHISKWLRKSIKQYDSFDASLEGLK 734
RALNQA+GRCIRHR D+GA+IL+D+R++ +R + +SKW+R+ I+ + +F+++LE L
Sbjct: 823 RALNQALGRCIRHRNDWGALILVDDRYRNNPSRYISGLSKWIRQQIQHHSTFESALESLA 882
Query: 735 SFFRDVKGW--VGKKMFNGLENSDNDVDHVSSMD 766
F + + V K ++++ + V+ +SSMD
Sbjct: 883 EFSKKHQKVLDVSIKDRTNIQDNGSTVEVISSMD 916
Score = 73.2 bits (178), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 44/64 (68%), Gaps = 5/64 (7%)
Query: 18 YHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLA 77
Y + G+++ FPY+ Y SQL M ++ L+ Q H LLESPTG+GKSL+LLCS LA
Sbjct: 8 YTISGVKINFPYKAYPSQLAMMNSILRGLNSKQ-----HCLLESPTGSGKSLALLCSALA 62
Query: 78 WQQN 81
WQQ+
Sbjct: 63 WQQS 66
>gi|345805276|ref|XP_852649.2| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group J protein
[Canis lupus familiaris]
Length = 1247
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 251/725 (34%), Positives = 385/725 (53%), Gaps = 114/725 (15%)
Query: 98 TEAVTDPLANGGGFIPESQPS-------TIPPSTNGQTAQVAMNNKNVKKKMTPTIFYAS 150
T + PL F P++ P + +N ++ + K K+ P I++ +
Sbjct: 191 TTKLNSPLEKINSFSPQNPPGHCSRCCCSTKQGSNQDSSNTTKKDHGGKSKI-PKIYFGT 249
Query: 151 RTHSQISQVISEYKKTAYR-VPMAVLASRKHYCTNKYVRDKENIDEEC-KLLLGDRNLGC 208
RTH QI+Q+ E ++TAY VPM +L+SR H C + V N +E+C +LL G C
Sbjct: 250 RTHKQIAQITRELRRTAYSGVPMTILSSRDHTCVHPEVVGNFNRNEKCMELLDGKNGKSC 309
Query: 209 PQFKNVHKVRGHPSLQ--KGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPY 266
+ VHK+ +LQ +G C + DIE+LV++G+ ++ C YY AR + +DA ++FCPY
Sbjct: 310 YFYHGVHKISNQHTLQTLQGMC-KAWDIEELVSLGKKLKACPYYTARELIEDAHIIFCPY 368
Query: 267 SYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQVC--S 324
+Y+++ IR +M++++K ++ILDEAHNIED AR++ S + E L + EL+ + +
Sbjct: 369 NYLLDAQIRESMDINLKEQVVILDEAHNIEDCARESASYSVTEVQLRFARDELDSMVNNN 428
Query: 325 VNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRELQEANISRQCFPI 384
+ ++PL + L+ W+E L +R+++ W+G + + L + I+ FPI
Sbjct: 429 IRKKNHEPLRAVCYSLINWLEANSEHLVERDYESSCKIWSGSEMVLNLHKMGITTATFPI 488
Query: 385 L-------LECATKAIKEATDTES-ELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQ 436
L L+ K + E+ E+P +S + I L+GLF Y F +N DY+
Sbjct: 489 LQGHFSAVLQKEEKVLPIHGKEETREVPIISASTQIMLKGLFMVFDYLFRQNSRFADDYK 548
Query: 437 LALQKYI----KRDSKNPGGNW--------------THTLSLWCLNPAVVFKDVAELSLS 478
+A+Q+ + D+ + G + H L+ WCLNPAV F D+ L+
Sbjct: 549 VAIQQTYSWINQTDTSDKNGFFAPAKNKKHLRQKTAVHVLNFWCLNPAVAFSDINGKVLT 608
Query: 479 IILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTAD 538
I+LTSGTLSPM SFSSELGV F LEA HVI+ + QV I +GP L A+++ +
Sbjct: 609 IVLTSGTLSPMKSFSSELGVTFTIQLEANHVIN-NSQVWVGTIGSGPKGRNLCATFQHTE 667
Query: 539 ----------------------------GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPK 570
YKL+EKL RW TG W L K + VEP+
Sbjct: 668 TFEFQDEVGALLLSVCQTVNQGILCFLPSYKLLEKLKERWLYTGLWHNLELVKTVIVEPQ 727
Query: 571 GGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVC 630
GG + DF +L+ YY++I K +G D GA +AVC
Sbjct: 728 GGEKTDFNELLQVYYDAI--------------KYKGEKD-------------GALLVAVC 760
Query: 631 RGK---------------IVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQA 675
RGK I +GIPFPN+ D+QV LK++YND + + LL G +WY QA
Sbjct: 761 RGKVSEGLDFSDDNARAVITIGIPFPNVKDLQVELKRQYNDQHSKLRGLLPGRQWYEIQA 820
Query: 676 FRALNQAIGRCIRHRFDYGAIILLDERFQEERNR--AHISKWLRKSIKQYDSFDASLEGL 733
+RALNQA+GRCIRH+ D+GA+IL+D+RF+ +R + +SKW+R+ I+ + +F+++LE L
Sbjct: 821 YRALNQALGRCIRHKNDWGALILVDDRFRSNPSRYISGLSKWIRQQIQHHSTFESALESL 880
Query: 734 KSFFR 738
F R
Sbjct: 881 SDFSR 885
Score = 77.8 bits (190), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 46/64 (71%), Gaps = 5/64 (7%)
Query: 18 YHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLA 77
Y +GG+++ FPY+ Y SQL M ++ L+ Q H LLESPTG+GKSL+LLCSTLA
Sbjct: 8 YTIGGVKITFPYKAYPSQLAMMNSIVRGLNSKQ-----HCLLESPTGSGKSLALLCSTLA 62
Query: 78 WQQN 81
WQQ+
Sbjct: 63 WQQS 66
>gi|296201899|ref|XP_002806878.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group J protein
[Callithrix jacchus]
Length = 1252
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 243/689 (35%), Positives = 367/689 (53%), Gaps = 106/689 (15%)
Query: 125 NGQTAQVAMNNKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYR-VPMAVLASRKHYCT 183
N Q + + + K P I++ +RTH QI+Q+ E ++TAY VPM +L+SR H C
Sbjct: 225 NSQESLNTIKKDHTGKSKIPKIYFGTRTHKQIAQITRELRRTAYSGVPMTILSSRDHTCV 284
Query: 184 NKYVRDKENIDEEC-KLLLGDRNLGCPQFKNVHKVRGHPSLQ--KGGCHEVHDIEDLVNV 240
+ V N +E+C +LL G C + VHK+ +LQ +G C + DIE+LV++
Sbjct: 285 HPEVVGNFNRNEKCMELLDGKNGKSCYFYHGVHKISDQHTLQTFQGMC-KAWDIEELVSL 343
Query: 241 GQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIAR 300
G+ +R C YY AR + DA ++FCPY+Y+++ IR M++++K ++ILDEAHNIED AR
Sbjct: 344 GKKLRACPYYTARELIQDADIIFCPYNYLLDAQIRETMDLNLKEQVVILDEAHNIEDCAR 403
Query: 301 DAGSVDIDEDVLLKLQMELEQVC--SVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQH 358
++ S + E L + EL+ + +V ++PL + L+ W+E L +R+++
Sbjct: 404 ESASYSVTEVQLRFARDELDSMVNNNVRKKDHEPLRAVCYSLINWLEANSEYLVERDYES 463
Query: 359 FFSCWTGDKALRELQEANISRQCFPILLECATKAIKE--------ATDTESELPHLSGMS 410
W+G++ L L + I+ FPIL + +++ + E+P +S +
Sbjct: 464 SCKIWSGNEMLLNLHKMGITTATFPILQGHFSAVLQKEEKIPPIYGKEEAIEVPIISAST 523
Query: 411 VITLEGLFSSLTYFFSRNGSHVSDYQLALQKYI------------------KRDSKNPGG 452
I L+GLF L Y F +N DY++A+Q+ K ++
Sbjct: 524 QIMLKGLFMVLDYLFRQNSRFADDYKIAIQQTYSWTNQVDISDKNGWLVLPKNKKRSRQK 583
Query: 453 NWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDV 512
H L+ WCLNPAV F D+ +I+LTSGTLSPM SFSSELGV F LEA HVI
Sbjct: 584 TAVHVLNFWCLNPAVAFSDINGKVRTIVLTSGTLSPMKSFSSELGVTFTIQLEANHVIK- 642
Query: 513 DLQVLTSVISTGPDNYPLNASYKTAD----------------------------GYKLME 544
+ QV + +GP L A+++ + YKL+E
Sbjct: 643 NSQVWVGTVGSGPKGRNLCATFQNTETFEFQDEVGALLLSVCQTVSQGILCFLPSYKLLE 702
Query: 545 KLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKR 604
KL RW TG W +L K + VEP+GG + DF+ +L+ YY++I K
Sbjct: 703 KLKERWLSTGLWHKLELVKTVIVEPQGGEKTDFDELLQVYYDAI--------------KY 748
Query: 605 EGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVS 649
+G D GA +AVCRGK I +GIPFPN+ D+QV
Sbjct: 749 KGEKD-------------GALLVAVCRGKVSEGLDFSDDNARAVITIGIPFPNVKDLQVE 795
Query: 650 LKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNR 709
LK++YND + + LL G +WY QA+RALNQA+GRCIRHR D+GA+IL+D+RF+ R
Sbjct: 796 LKRQYNDHHSKLRGLLPGRQWYEIQAYRALNQALGRCIRHRNDWGALILVDDRFRNNPGR 855
Query: 710 --AHISKWLRKSIKQYDSFDASLEGLKSF 736
+ +SKW+R+ I+ + +F+++LE L F
Sbjct: 856 YISGLSKWIRQQIQHHSTFESALESLAEF 884
Score = 72.8 bits (177), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 44/64 (68%), Gaps = 5/64 (7%)
Query: 18 YHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLA 77
Y + G+++ FPY+ Y SQL M ++ L+ Q H LLESPTG+GKSL+LLCS LA
Sbjct: 8 YTISGVKINFPYKAYPSQLAMMNSILRGLNSKQ-----HCLLESPTGSGKSLALLCSALA 62
Query: 78 WQQN 81
WQQ+
Sbjct: 63 WQQS 66
>gi|297715610|ref|XP_002834155.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group J protein
[Pongo abelii]
Length = 1248
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 246/722 (34%), Positives = 375/722 (51%), Gaps = 112/722 (15%)
Query: 98 TEAVTDPLANGGGFIPESQPSTI------PPSTNGQTAQVAMNNKNVKKKMTPTIFYASR 151
T + PL F+P+ P N Q + + + K P I++ +R
Sbjct: 192 TVKLNSPLGKINSFLPQKTPGHCSRCCCSTKQGNSQESSNTIKKDHTGKSKIPKIYFGTR 251
Query: 152 THSQISQVISEYKKTAYR-VPMAVLASRKHYCTNKYVRDKENIDEEC-KLLLGDRNLGCP 209
TH QI+Q+ E ++TAY VPM +L+SR H C + N +E+C +LL G C
Sbjct: 252 THKQIAQITRELRRTAYSGVPMTILSSRDHTCVHPEAVGNFNRNEKCMELLDGKNGKSCY 311
Query: 210 QFKNVHKVRGHPSLQ--KGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYS 267
+ VHK+ +LQ +G C + DIE+LV++G+ ++ C YY AR + DA ++FCPY+
Sbjct: 312 FYHGVHKISDQHTLQTFQGMC-KAWDIEELVSLGKKIKACPYYTARELIQDADIIFCPYN 370
Query: 268 YIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQVC--SV 325
Y+++ IR +M++++K ++ILDEAHNIED AR++ S + E L + EL+ + ++
Sbjct: 371 YLLDAQIRESMDLNLKEQVVILDEAHNIEDCARESASYSVTEVQLRFARDELDSMVNNNI 430
Query: 326 NPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRELQEANISRQCFPIL 385
++PL + L+ W+E L +R+++ W+G++ L L + I+ FPIL
Sbjct: 431 RKKDHEPLRAVCYSLINWLEANSEYLVERDYESACKIWSGNEMLLTLHKMGITTATFPIL 490
Query: 386 LECATKAIKE--------ATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQL 437
+ +++ + E+P +S + I L+GLF L Y F +N DY++
Sbjct: 491 QGHFSAVLQKEEKILPIYGKEETREVPVISASTQIMLKGLFMVLDYLFRQNSRFADDYKI 550
Query: 438 ALQKYI------------------KRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSI 479
A+Q+ K ++ H L+ WCLNPAV F D+ +I
Sbjct: 551 AIQQTYSWTNQIDISDKNGLLVLPKNKKRSRQKTAVHVLNFWCLNPAVAFSDINGKVQTI 610
Query: 480 ILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTAD- 538
+LTSGTLSPM SFSSELGV F LEA HVI + QV I +GP L A+++ +
Sbjct: 611 VLTSGTLSPMKSFSSELGVTFTIQLEANHVIK-NSQVWVGTIGSGPKGRNLCATFQNTET 669
Query: 539 ---------------------------GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKG 571
YKL+EKL RW TG W L K + VEP+G
Sbjct: 670 FEFQDEVGALLLSVCQTVSQGILCFLPSYKLLEKLKERWLSTGLWHNLELVKTVIVEPQG 729
Query: 572 GSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCR 631
G + +F+ +L+ YY++I K +G D GA +AVCR
Sbjct: 730 GEKTNFDELLQVYYDAI--------------KYKGEKD-------------GALLVAVCR 762
Query: 632 GK---------------IVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAF 676
GK I +GIPFPN+ D+QV LK++YND + + LL G +WY QA+
Sbjct: 763 GKVSEGLDFSDDNARAVITIGIPFPNVKDLQVELKRQYNDHHSKLRGLLPGRQWYEIQAY 822
Query: 677 RALNQAIGRCIRHRFDYGAIILLDERFQEERNR--AHISKWLRKSIKQYDSFDASLEGLK 734
RALNQA+GRCIRHR D+GA+IL+D+RF+ R + +SKW+R+ I+ + +F+++LE L
Sbjct: 823 RALNQALGRCIRHRNDWGALILVDDRFRNNPGRYISGLSKWVRQQIQHHSTFESALESLA 882
Query: 735 SF 736
F
Sbjct: 883 EF 884
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 45/64 (70%), Gaps = 5/64 (7%)
Query: 18 YHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLA 77
Y +GG+++ FPY+ Y SQL M ++ L+ Q H LLESPTG+GKSL+LLCS LA
Sbjct: 8 YTIGGVKIYFPYKAYPSQLAMMNSILRGLNSKQ-----HCLLESPTGSGKSLALLCSALA 62
Query: 78 WQQN 81
WQQ+
Sbjct: 63 WQQS 66
>gi|426238589|ref|XP_004013233.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group J protein
[Ovis aries]
Length = 1234
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 242/673 (35%), Positives = 361/673 (53%), Gaps = 104/673 (15%)
Query: 140 KKMTPTIFYASRTHSQISQVISEYKKTAYR-VPMAVLASRKHYCTNKYVRDKENIDEEC- 197
K P I++ +RTH QI+Q+ E ++TAY VPM +L+SR H C + V N +E C
Sbjct: 238 KSKIPKIYFGTRTHKQIAQITRELQRTAYSGVPMTILSSRDHSCVHPEVIGNFNRNERCM 297
Query: 198 KLLLGDRNLGCPQFKNVHKVRGHPSLQK-GGCHEVHDIEDLVNVGQVVRGCSYYAARSMA 256
+LL G C + VHK+ +LQ G H+ DIE+LV++G+ ++ C YY AR +
Sbjct: 298 ELLDGKNGKSCYFYHGVHKISDQHTLQTFQGMHKAWDIEELVSLGRKLKACPYYTARELM 357
Query: 257 DDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQ 316
DA ++FCPY+Y+++ IR M++++K ++ILDEAHNIED AR++ S + E L +
Sbjct: 358 QDADIIFCPYNYLLDAQIRETMDINLKEQVVILDEAHNIEDCARESASYSVTEVQLRFAR 417
Query: 317 MELEQVCSVN--PMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRELQE 374
EL+ + + N ++PL + L+ W+E L +R+++ W+G + L L +
Sbjct: 418 DELDSMINYNIRKKDHEPLRAVCCSLINWLEASSEHLVERDYESSCKVWSGSEMLLNLHK 477
Query: 375 ANISRQCFPILLECATKAIKEATDTES--------ELPHLSGMSVITLEGLFSSLTYFFS 426
I+ FPIL + ++ S E+P +S + I L+GLF L Y F
Sbjct: 478 MGITTATFPILQGHFSAVLQREEKVPSIHGKEEAREIPVISASTQIMLKGLFMVLDYLFR 537
Query: 427 RNGSHVSDYQLALQKYI----KRDSKNPGG--------------NWTHTLSLWCLNPAVV 468
+N DY++A+Q+ + D+ + G H L+ WCLNPAV
Sbjct: 538 QNSRFADDYKVAIQQTYSWINQTDTTDKNGLLILSKNKKRSRQKAAVHVLNFWCLNPAVA 597
Query: 469 FKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNY 528
F D+ +I+LTSGTLSPM SFSSELGV F LEA HVI+ + QV I +GP
Sbjct: 598 FSDINGKVWTIVLTSGTLSPMKSFSSELGVTFTIQLEANHVIN-NSQVWVGTIGSGPKGR 656
Query: 529 PLNASYKTAD----------------------------GYKLMEKLCNRWRETGQWSRLN 560
L A+++ + YKL+EKL RW TG W L
Sbjct: 657 NLCATFQHTETFEFQDEVGALLLSVCQTVSQGILCFLPSYKLLEKLKERWLSTGLWHNLE 716
Query: 561 AKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENAN 620
K + VEP+GG + DF+ +L+ YY++I K +G D
Sbjct: 717 LVKTVIVEPQGGEKIDFDELLQVYYDAI--------------KYKGEKD----------- 751
Query: 621 KKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKKYNDTYRSSKNLL 665
GA +AVCRGK + +GIPFPN+ D+QV LKK+YND + + LL
Sbjct: 752 --GALLVAVCRGKVSEGLDFSDDNARAVVTIGIPFPNVKDLQVELKKQYNDQHSKLRGLL 809
Query: 666 SGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNR--AHISKWLRKSIKQY 723
G +WY QA+RALNQA+GRCIRH+ D+GA+IL+D+RF+ +R + +SKW+R+ I+ +
Sbjct: 810 PGRQWYEIQAYRALNQALGRCIRHKNDWGALILVDDRFRSNPSRYISGLSKWVRQLIQHH 869
Query: 724 DSFDASLEGLKSF 736
+F+++LE L F
Sbjct: 870 STFESALESLAEF 882
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 44/64 (68%), Gaps = 5/64 (7%)
Query: 18 YHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLA 77
Y +GG+++ FP + Y SQL M ++ L+ Q H LLESPTG+GKSL+LLCS LA
Sbjct: 6 YTIGGVKINFPCKAYPSQLAMMNSIVRGLNSKQ-----HCLLESPTGSGKSLALLCSALA 60
Query: 78 WQQN 81
WQQ+
Sbjct: 61 WQQS 64
>gi|332258882|ref|XP_003278520.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group J protein
[Nomascus leucogenys]
Length = 1248
Score = 421 bits (1083), Expect = e-114, Method: Compositional matrix adjust.
Identities = 250/723 (34%), Positives = 380/723 (52%), Gaps = 112/723 (15%)
Query: 97 DTEAVTDPLANGGGFIPESQP---STIPPSTNGQTAQVAMNN---KNVKKKMTPTIFYAS 150
+T + PL F P+ P S ST +Q ++N + K P I++ +
Sbjct: 191 NTVKLNSPLGKINSFSPQKPPGHCSRCCCSTKQGNSQESLNTIKKDHTGKSKIPKIYFGT 250
Query: 151 RTHSQISQVISEYKKTAYR-VPMAVLASRKHYCTNKYVRDKENIDEEC-KLLLGDRNLGC 208
RTH QI+Q+ E ++TAY VPM +L+SR H C + V N +E+C +L G C
Sbjct: 251 RTHKQIAQITRELRRTAYSGVPMTILSSRDHTCVHPEVVGNFNRNEKCMELRDGKNGKSC 310
Query: 209 PQFKNVHKVRGHPSLQ--KGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPY 266
+ VHK+ +LQ +G C + DIE+LV++G+ ++ C YY AR + DA ++FCPY
Sbjct: 311 YFYHGVHKISDQHTLQTFQGMC-KAWDIEELVSLGKKLKACPYYTARELIQDADIIFCPY 369
Query: 267 SYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQVC--S 324
+Y+++ IR +M++++K ++ILDEAHNIED AR++ S + E L + EL+ + +
Sbjct: 370 NYLLDAQIRESMDLNLKEQVVILDEAHNIEDCARESASYSVTEVQLRFARDELDSMVNNN 429
Query: 325 VNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRELQEANISRQCFPI 384
+ ++PL + L+ W+E L +R+++ W+G++ L L + I+ FPI
Sbjct: 430 IRKKDHEPLRAVCYSLINWLEANSEYLVERDYESACKIWSGNEMLLNLHKMGITTATFPI 489
Query: 385 LLECATKAIKE--------ATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQ 436
L + +++ + E+P +S + I L+GLF L Y F +N DY+
Sbjct: 490 LQGHFSAVLQKEEKISPIYGKEEAREVPIISASTQIMLKGLFMVLDYLFRQNNRFADDYK 549
Query: 437 LALQKYI------------------KRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLS 478
+A+Q+ K ++ H L+ WCLNPAV F D+ +
Sbjct: 550 IAIQQTYSWTNQIDISDKNGLLVLPKNKKRSRQKTAVHVLNFWCLNPAVAFSDINGKVQT 609
Query: 479 IILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTAD 538
I+LTSGTLSPM SFSSELGV F LEA HVI D QV I +GP L A+++ +
Sbjct: 610 IVLTSGTLSPMKSFSSELGVTFTIQLEANHVIK-DSQVWVGTIGSGPKGRNLCATFQNTE 668
Query: 539 ----------------------------GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPK 570
YKL+EKL RW TG W L K + VEP+
Sbjct: 669 TFEFQDEVGALLLSVCQTVSQGILCFLPSYKLLEKLKERWFSTGLWHNLELVKTVIVEPQ 728
Query: 571 GGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVC 630
GG + +F+ +L+ YY++I K +G D GA +AVC
Sbjct: 729 GGEKTNFDELLQVYYDAI--------------KYKGEKD-------------GALLVAVC 761
Query: 631 RGK---------------IVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQA 675
RGK I +GIPFPN+ D+QV LK++YND + + LL G +WY QA
Sbjct: 762 RGKVSEGLDFSDDNARAVITIGIPFPNVKDLQVELKRQYNDHHSKLRGLLPGRQWYEIQA 821
Query: 676 FRALNQAIGRCIRHRFDYGAIILLDERFQEERNR--AHISKWLRKSIKQYDSFDASLEGL 733
+RALNQA+GRCIRHR D+GA+IL+D+RF+ +R + +SKW+R+ I+ + +F+++LE L
Sbjct: 822 YRALNQALGRCIRHRNDWGALILVDDRFRNNPSRYISGLSKWVRQQIQHHSTFESALESL 881
Query: 734 KSF 736
F
Sbjct: 882 AEF 884
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 45/64 (70%), Gaps = 5/64 (7%)
Query: 18 YHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLA 77
Y +GG+++ FPY+ Y SQL M ++ L+ Q H LLESPTG+GKSL+LLCS LA
Sbjct: 8 YTIGGVKIYFPYKAYPSQLAMMNSILRGLNSKQ-----HCLLESPTGSGKSLALLCSALA 62
Query: 78 WQQN 81
WQQ+
Sbjct: 63 WQQS 66
>gi|395845987|ref|XP_003795698.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group J protein
[Otolemur garnettii]
Length = 1234
Score = 421 bits (1082), Expect = e-114, Method: Compositional matrix adjust.
Identities = 247/715 (34%), Positives = 371/715 (51%), Gaps = 110/715 (15%)
Query: 104 PLANGGGFIPESQPSTI-----PPSTNGQTAQVAMNNKNVKKKMTPTIFYASRTHSQISQ 158
PL F P++ P N Q + + K P I++ +RTH QI+Q
Sbjct: 198 PLGKINSFSPQNPPGHCSKCCSTKQGNSQESSNTTKKDHGGKFKIPKIYFGTRTHKQIAQ 257
Query: 159 VISEYKKTAYR-VPMAVLASRKHYCTNKYVRDKENIDEEC-KLLLGDRNLGCPQFKNVHK 216
+ E ++TAY VPM +L+SR H C + V N +E+C +LL G C + VHK
Sbjct: 258 ITKELRRTAYSGVPMTILSSRDHTCVHPEVVGNFNRNEKCMELLDGKNGKSCYFYHGVHK 317
Query: 217 VRGHPSLQK-GGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIR 275
+ +LQ G + DIE+LV++G+ ++ C YY AR + DA ++FCPY+Y+++ IR
Sbjct: 318 ISDQHTLQTLQGMSKAWDIEELVSLGKKLKACPYYTARELIGDADIIFCPYNYLLDSQIR 377
Query: 276 GAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQVC--SVNPMIYQPL 333
+M++++K ++ILDEAHNIED AR++ S + E L + EL+ + ++ ++PL
Sbjct: 378 ESMDLNLKEQVVILDEAHNIEDCARESASYSVTEVQLRFARDELDSLVNNNIRKKDHEPL 437
Query: 334 IEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRELQEANISRQCFPILLECATKAI 393
+ L+ W+E L +R+++ W+G + L L I+ FPIL + +
Sbjct: 438 RAVCCSLINWLEANSEHLIERDYESSCKIWSGSEMLLNLHRMGITTATFPILQGHFSAVL 497
Query: 394 KE--------ATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYI-- 443
++ + E+P +S + I L+GLF L Y F +N DY++A+Q+
Sbjct: 498 QKEEKVSAIYGKEEAREVPIISASTQIMLKGLFMVLDYLFRQNSRFADDYKIAIQQTYSW 557
Query: 444 -----------------KRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTL 486
K ++ H L+ WCLNPAV F D+ +I+LTSGTL
Sbjct: 558 INETNTSDKNMLVALLPKNKKRSRQKTAVHVLNFWCLNPAVAFSDINGKVRTIVLTSGTL 617
Query: 487 SPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTAD-------- 538
SPM SFSSELGV F LEA HVI + QV I +GP L A+++ +
Sbjct: 618 SPMKSFSSELGVTFTIQLEANHVIK-NSQVWVGTIGSGPKGRNLCATFQHTETFEFQDEV 676
Query: 539 --------------------GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFE 578
YKL+EKL RW TG W L K + VEP+GG + +F+
Sbjct: 677 GALLLSVCQTVSQGILCFLPSYKLLEKLKERWLSTGLWHNLELVKTVIVEPQGGEKTNFD 736
Query: 579 IVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGK----- 633
+L+ YY++I K +G D GA +AVCRGK
Sbjct: 737 ELLQLYYDAI--------------KFKGEKD-------------GALLVAVCRGKVSEGL 769
Query: 634 ----------IVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAI 683
I +GIPFPN+ D+QV LK+KYND + + +LSG +WY QA+RALNQA+
Sbjct: 770 DFSDDNARAVITIGIPFPNVKDLQVELKRKYNDHHSKLRGVLSGRQWYEIQAYRALNQAL 829
Query: 684 GRCIRHRFDYGAIILLDERFQEERNR--AHISKWLRKSIKQYDSFDASLEGLKSF 736
GRCIRHR D+GA+IL+D+RF+ NR + +SKW+R+ I+ + +F+++LE L F
Sbjct: 830 GRCIRHRNDWGALILVDDRFRSNPNRYISGLSKWIRQQIQHHSTFESALESLAEF 884
Score = 76.3 bits (186), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 44/63 (69%), Gaps = 5/63 (7%)
Query: 18 YHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLA 77
Y +GG+++ FPY+ Y SQL M ++ L+ Q H LLESPTG+GKSL+LLCS LA
Sbjct: 8 YTIGGVKINFPYKAYPSQLAMMNSIVRGLNSKQ-----HCLLESPTGSGKSLALLCSALA 62
Query: 78 WQQ 80
WQQ
Sbjct: 63 WQQ 65
>gi|326931537|ref|XP_003211885.1| PREDICTED: Fanconi anemia group J protein homolog [Meleagris
gallopavo]
Length = 1257
Score = 421 bits (1082), Expect = e-114, Method: Compositional matrix adjust.
Identities = 253/702 (36%), Positives = 376/702 (53%), Gaps = 111/702 (15%)
Query: 123 STNGQTAQVAMNNK---NVKKKMTPTIFYASRTHSQISQVISEYKKTAYR-VPMAVLASR 178
S+ +T + A N K N + P IF+ +RTH QI+Q+ E K+TAY V M +L+SR
Sbjct: 230 SSGKETRKDAGNTKKKANGDQTFIPKIFFGTRTHKQIAQITRELKRTAYSGVSMTILSSR 289
Query: 179 KHYCTN-KYVRDKENIDEEC-KLLLGDRNLGCPQFKNVHKVRGHPSLQKG-GCHEVHDIE 235
+ C + N +E C +LL G C + VHK+ H +L ++ DIE
Sbjct: 290 DYTCIHPVVSSSSSNRNELCVELLEGKHGKSCLYYHGVHKLTEHYALHSAHNTYQAWDIE 349
Query: 236 DLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNI 295
DLV++G+ +R C Y+AAR + A +VFCPY+Y+++P IR +ME+++KG ++ILDEAHNI
Sbjct: 350 DLVSLGKKLRACPYFAARELMVGADIVFCPYNYLLDPQIRESMEINLKGQVVILDEAHNI 409
Query: 296 EDIARDAGSVDIDEDVLLKLQMELEQVC--SVNPMIYQPLIEMTQDLVGWIERRKATLAK 353
ED AR+A S + E L + EL+ + ++ ++ L + L W+ + L +
Sbjct: 410 EDSAREAVSYSVTESQLNAAREELDFMVNNNIRQKDHEHLRAVCYSLTNWLRASSSQLVE 469
Query: 354 REFQHFFSCWTGDKALRELQEANISRQCFPIL-------LECATKAIKEATDTESELPHL 406
++ W+G + L E I+ FPIL LE K + E+P +
Sbjct: 470 TGYETSCKVWSGKEMLNHFHEMGITNISFPILQKHLSAVLEKEEKISMFGKEELVEIPIV 529
Query: 407 SGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQK-YIKRDSKNPGGNWT---------- 455
S + I L+GLF L Y F N DY++ALQ+ Y + P + T
Sbjct: 530 SSATQIVLKGLFMVLLYLFKDNSRFADDYRVALQQTYAWTNENQPDVSDTSAFLTKTKHK 589
Query: 456 ---------HTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEA 506
H L+ WCLNPAV F D+ ++ +I+LTSGTLSPM+SFSSELGV+F LEA
Sbjct: 590 RNLRHKTVVHMLNFWCLNPAVAFSDLNDVR-TIVLTSGTLSPMDSFSSELGVKFSIQLEA 648
Query: 507 PHVIDVDLQVLTSVISTGPDNYPLNASYKTAD---------------------------- 538
HVI + QV I GP+ L A+++ +
Sbjct: 649 NHVIR-NSQVWVGTIGAGPNGRKLCATFQHTETFEFQDEVGALLLSVCQTVGQGILCFLP 707
Query: 539 GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVR 598
YKL++KL +RW TG W L K + EP+GG++ DF+ +LK YY++I
Sbjct: 708 SYKLLDKLKDRWMHTGLWRNLELVKTVIAEPQGGAKSDFDELLKIYYDAI---------- 757
Query: 599 KKRVKREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNI 643
K +G D GA +AVCRGK I +GIPFPN+
Sbjct: 758 ----KFKGGKD-------------GALLIAVCRGKVSEGLDFCDENARAVITIGIPFPNV 800
Query: 644 NDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERF 703
D+QV LK+KYND +++++ LL G++WY QA+RALNQA+GRCIRHR D+GA+IL+D+RF
Sbjct: 801 KDLQVELKRKYNDQHKTTRGLLPGSQWYEIQAYRALNQALGRCIRHRSDWGALILVDDRF 860
Query: 704 QEERNR--AHISKWLRKSIKQYDSFDASLEGLKSFF-RDVKG 742
+ N+ +SKW+R+ ++ +++F ++LE L +F R+ KG
Sbjct: 861 RNNPNKYITGLSKWIRQQVQHHENFGSALESLHAFAERNQKG 902
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 45/66 (68%), Gaps = 5/66 (7%)
Query: 15 LNAYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCS 74
++ Y +GG+++ FP + Y SQL M ++ L+ Q H LLESPTG+GKSL+LLCS
Sbjct: 5 VSQYTIGGVKIMFPCKAYPSQLAMMNAIVKGLNNGQ-----HCLLESPTGSGKSLALLCS 59
Query: 75 TLAWQQ 80
L+WQQ
Sbjct: 60 ALSWQQ 65
>gi|402899850|ref|XP_003912899.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group J protein
[Papio anubis]
Length = 1248
Score = 421 bits (1081), Expect = e-114, Method: Compositional matrix adjust.
Identities = 244/689 (35%), Positives = 372/689 (53%), Gaps = 106/689 (15%)
Query: 125 NGQTAQVAMNNKNVKKKMTPTIFYASRTHSQISQVISEYKKTAY-RVPMAVLASRKHYCT 183
N Q + + + K P I++ +RTH QI+Q+ E ++TAY RVPM +L+SR H C
Sbjct: 225 NSQESSNTIKKDHAGKSKIPKIYFGTRTHKQIAQITRELRRTAYSRVPMTILSSRDHTCV 284
Query: 184 NKYVRDKENIDEECKLLLGDRN-LGCPQFKNVHKVRGHPSLQ--KGGCHEVHDIEDLVNV 240
+ V N +E+C LL RN C + VHK+ +LQ +G C + DIE+LV++
Sbjct: 285 HPEVVGNFNRNEKCMELLDGRNGKSCYFYHGVHKISDQHTLQTFQGMC-KAWDIEELVSL 343
Query: 241 GQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIAR 300
G+ ++ C YY AR + DA ++FCPY+Y+++ IR +M++++K ++ILDEAHNIED AR
Sbjct: 344 GKKLKACPYYTARELIQDADIIFCPYNYLLDAQIRESMDLNLKEQVVILDEAHNIEDCAR 403
Query: 301 DAGSVDIDEDVLLKLQMELEQVC--SVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQH 358
++ S I E L + EL+ + ++ ++PL + L+ W+E L +R+++
Sbjct: 404 ESASYSITEVQLRFARDELDSMVNNNIRRKDHEPLRAVCYSLINWLEANSEYLVERDYES 463
Query: 359 FFSCWTGDKALRELQEANISRQCFPILLECATKAIKE--------ATDTESELPHLSGMS 410
W+G++ L L + I+ FPIL + +++ + E+P +S +
Sbjct: 464 ACKIWSGNEMLLNLHKMGITTATFPILQGHFSAVLQKEEKISPIYGKEEAREVPIISAST 523
Query: 411 VITLEGLFSSLTYFFSRNGSHVSDYQLALQKYI----KRDSKNPGG------NWTHT--- 457
I L+GLF L Y F +N DY++A+Q+ + D + G N H+
Sbjct: 524 QIMLKGLFMVLDYLFRQNSRFADDYKIAIQQTYSWTNQIDISDKNGLLILPKNKKHSRQK 583
Query: 458 -----LSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDV 512
L+ WCLNPAV F D+ +I+LTSGTLSPM SFSSELGV F LEA HVI
Sbjct: 584 TAVRVLNFWCLNPAVAFSDINGKVQTIVLTSGTLSPMKSFSSELGVTFTVQLEANHVIK- 642
Query: 513 DLQVLTSVISTGPDNYPLNASYKTAD----------------------------GYKLME 544
+ QV I +GP L A+++ + YKL+E
Sbjct: 643 NSQVWVGTIGSGPKGRNLCATFQNTETFEFQDEVGALLLSVCQTVSQGILCFLPSYKLLE 702
Query: 545 KLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKR 604
KL RW TG W L K + VEP+GG + +F+ +L+ YY++I K
Sbjct: 703 KLKERWLSTGLWHNLELVKTVIVEPQGGEKTNFDELLQVYYDAI--------------KY 748
Query: 605 EGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVS 649
+G D GA +AVCRGK + +GIPFPN+ D+QV
Sbjct: 749 KGEKD-------------GALLVAVCRGKVSEGLDFSDDNARAVVTIGIPFPNVKDLQVE 795
Query: 650 LKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNR 709
LK++YND + + LL G +WY QA+RALNQA+GRCIRH+ D+GA+IL+D+RF+ +R
Sbjct: 796 LKRRYNDHHSKLRGLLPGRQWYEIQAYRALNQALGRCIRHQNDWGALILVDDRFRNNPSR 855
Query: 710 --AHISKWLRKSIKQYDSFDASLEGLKSF 736
+ +SKW+R+ I+ + +F+++LE L F
Sbjct: 856 YISGLSKWVRQQIQHHSTFESALESLAEF 884
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 45/64 (70%), Gaps = 5/64 (7%)
Query: 18 YHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLA 77
Y +GG+++ FPY+ Y SQL M ++ L+ Q H LLESPTG+GKSL+LLCS LA
Sbjct: 8 YTIGGVKIYFPYKAYPSQLAMMNSILRGLNSKQ-----HCLLESPTGSGKSLALLCSALA 62
Query: 78 WQQN 81
WQQ+
Sbjct: 63 WQQS 66
>gi|30795235|ref|NP_840094.1| Fanconi anemia group J protein homolog [Mus musculus]
gi|78099253|sp|Q5SXJ3.1|FANCJ_MOUSE RecName: Full=Fanconi anemia group J protein homolog; Short=Protein
FACJ; AltName: Full=ATP-dependent RNA helicase BRIP1;
AltName: Full=BRCA1-associated C-terminal helicase 1;
AltName: Full=BRCA1-interacting protein C-terminal
helicase 1; Short=BRCA1-interacting protein 1
gi|62740250|gb|AAH94252.1| BRCA1 interacting protein C-terminal helicase 1 [Mus musculus]
Length = 1174
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 241/673 (35%), Positives = 360/673 (53%), Gaps = 108/673 (16%)
Query: 144 PTIFYASRTHSQISQVISEYKKTAYR-VPMAVLASRKHYCTNKYVRDKENIDEEC-KLLL 201
P I++ +RTH QI+Q+ E +KTAY VPM +L+SR H C + V N E+C +LL
Sbjct: 247 PKIYFGTRTHKQIAQITRELRKTAYSGVPMTILSSRDHSCVHPEVVGNFNRKEKCMELLD 306
Query: 202 GDRNLGCPQFKNVHKVRGHPSLQK-GGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQ 260
G C + VHK+ +LQ G DIE+LV++G+ ++ C YY AR + +DA
Sbjct: 307 GKHGKSCYFYHGVHKISNQQTLQHLQGMSRAWDIEELVSLGRKLKACPYYTARELIEDAD 366
Query: 261 LVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELE 320
+VFCPY+Y+++ IR M++ +KG ++ILDEAHNIED AR++ S + E L + EL+
Sbjct: 367 IVFCPYNYLLDSQIRETMDIKLKGQVVILDEAHNIEDCARESASYSVTEVQLRFARDELD 426
Query: 321 QVCSVN--PMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRELQEANIS 378
+ + N ++PL ++ +L+ W+E L +R ++ W+G++ L L I+
Sbjct: 427 SLINGNIRKKSHEPLRDVCYNLINWLETNSKHLVERGYESSCKIWSGNEMLLNLYRMGIT 486
Query: 379 RQCFPILLECATKAIKE--------ATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGS 430
FP+L + +++ + ++P +S + + L+GLF L Y F N
Sbjct: 487 TATFPVLQRHLSAVLQKEEKVTPIHGKEEAIQIPIISASTQVVLKGLFMVLDYLFRENSR 546
Query: 431 HVSDYQLALQKYI--------------------KRDSKNPGGNWTHTLSLWCLNPAVVFK 470
DY++A+Q+ K+ S+ G + L+ WCLNPAV F
Sbjct: 547 FADDYKVAIQQTYSWTNQIAIFDKTGVLAVPKNKKHSRQKIG--VNALNFWCLNPAVAFS 604
Query: 471 DVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPL 530
D+ + +I+LTSGTLSP+ SFSSELGV F LEA HVI + QV + +GP L
Sbjct: 605 DINDKVRTIVLTSGTLSPLKSFSSELGVTFSIQLEANHVIS-NSQVWVGTVGSGPKGRNL 663
Query: 531 NASYKTAD----------------------------GYKLMEKLCNRWRETGQWSRLNAK 562
A+++ + YKL+EKL RW TG W L +
Sbjct: 664 CATFQHTETFEFQDEVGMLLLSVCQTVSQGILCFLPSYKLLEKLRERWIFTGLWHSLESV 723
Query: 563 KPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKK 622
K + EP+GG + DF+ +L+ YY++I K +G D
Sbjct: 724 KTVIAEPQGGEKTDFDELLQVYYDAI--------------KFKGEKD------------- 756
Query: 623 GASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSG 667
GA +AVCRGK I VGIPFPN+ D+QV LK++YND + S+ LL G
Sbjct: 757 GALLIAVCRGKVSEGLDFSDDNARAVITVGIPFPNVKDLQVELKRQYNDHHSKSRGLLPG 816
Query: 668 NEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNR--AHISKWLRKSIKQYDS 725
+WY QA+RALNQA+GRCIRH+ D+GA+IL+D+RF NR + +SKW+R+ I+ + S
Sbjct: 817 RQWYEIQAYRALNQALGRCIRHKNDWGALILVDDRFNNNPNRYISGLSKWVRQQIQHHSS 876
Query: 726 FDASLEGLKSFFR 738
F ++LE L F R
Sbjct: 877 FASALESLTEFSR 889
Score = 73.2 bits (178), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 47/67 (70%), Gaps = 5/67 (7%)
Query: 15 LNAYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCS 74
L+ Y +GG+++ FP + Y +QL M ++ L+ +Q H LLESPTG+GKSL+LLCS
Sbjct: 5 LSDYTIGGVKIHFPCRAYPAQLAMMNSIVRGLNSSQ-----HCLLESPTGSGKSLALLCS 59
Query: 75 TLAWQQN 81
LAWQQ+
Sbjct: 60 ALAWQQS 66
>gi|301897118|ref|NP_114432.2| Fanconi anemia group J protein [Homo sapiens]
gi|119571815|gb|EAW51430.1| BRCA1 interacting protein C-terminal helicase 1, isoform CRA_a
[Homo sapiens]
gi|119571816|gb|EAW51431.1| BRCA1 interacting protein C-terminal helicase 1, isoform CRA_a
[Homo sapiens]
gi|119571817|gb|EAW51432.1| BRCA1 interacting protein C-terminal helicase 1, isoform CRA_a
[Homo sapiens]
gi|119571818|gb|EAW51433.1| BRCA1 interacting protein C-terminal helicase 1, isoform CRA_a
[Homo sapiens]
Length = 1249
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 246/722 (34%), Positives = 376/722 (52%), Gaps = 112/722 (15%)
Query: 98 TEAVTDPLANGGGFIPESQPSTI------PPSTNGQTAQVAMNNKNVKKKMTPTIFYASR 151
T + PL F P+ P N Q + + + K P I++ +R
Sbjct: 192 TVKLNSPLEKINSFSPQKPPGHCSRCCCSTKQGNSQESSNTIKKDHTGKSKIPKIYFGTR 251
Query: 152 THSQISQVISEYKKTAYR-VPMAVLASRKHYCTNKYVRDKENIDEEC-KLLLGDRNLGCP 209
TH QI+Q+ E ++TAY VPM +L+SR H C + V N +E+C +LL G C
Sbjct: 252 THKQIAQITRELRRTAYSGVPMTILSSRDHTCVHPEVVGNFNRNEKCMELLDGKNGKSCY 311
Query: 210 QFKNVHKVRGHPSLQ--KGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYS 267
+ VHK+ +LQ +G C + DIE+LV++G+ ++ C YY AR + DA ++FCPY+
Sbjct: 312 FYHGVHKISDQHTLQTFQGMC-KAWDIEELVSLGKKLKACPYYTARELIQDADIIFCPYN 370
Query: 268 YIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQVC--SV 325
Y+++ IR +M++++K ++ILDEAHNIED AR++ S + E L + EL+ + ++
Sbjct: 371 YLLDAQIRESMDLNLKEQVVILDEAHNIEDCARESASYSVTEVQLRFARDELDSMVNNNI 430
Query: 326 NPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRELQEANISRQCFPIL 385
++PL + L+ W+E L +R+++ W+G++ L L + I+ FPIL
Sbjct: 431 RKKDHEPLRAVCCSLINWLEANAEYLVERDYESACKIWSGNEMLLTLHKMGITTATFPIL 490
Query: 386 LECATKAIKE--------ATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQL 437
+ +++ + E+P +S + I L+GLF L Y F +N DY++
Sbjct: 491 QGHFSAVLQKEEKISPIYGKEEAREVPVISASTQIMLKGLFMVLDYLFRQNSRFADDYKI 550
Query: 438 ALQKYI------------------KRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSI 479
A+Q+ K ++ H L+ WCLNPAV F D+ +I
Sbjct: 551 AIQQTYSWTNQIDISDKNGLLVLPKNKKRSRQKTAVHVLNFWCLNPAVAFSDINGKVQTI 610
Query: 480 ILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTAD- 538
+LTSGTLSPM SFSSELGV F LEA H+I + QV I +GP L A+++ +
Sbjct: 611 VLTSGTLSPMKSFSSELGVTFTIQLEANHIIK-NSQVWVGTIGSGPKGRNLCATFQNTET 669
Query: 539 ---------------------------GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKG 571
YKL+EKL RW TG W L K + VEP+G
Sbjct: 670 FEFQDEVGALLLSVCQTVSQGILCFLPSYKLLEKLKERWLSTGLWHNLELVKTVIVEPQG 729
Query: 572 GSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCR 631
G + +F+ +L+ YY++I K +G D GA +AVCR
Sbjct: 730 GEKTNFDELLQVYYDAI--------------KYKGEKD-------------GALLVAVCR 762
Query: 632 GK---------------IVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAF 676
GK I +GIPFPN+ D+QV LK++YND + + LL G +WY QA+
Sbjct: 763 GKVSEGLDFSDDNARAVITIGIPFPNVKDLQVELKRQYNDHHSKLRGLLPGRQWYEIQAY 822
Query: 677 RALNQAIGRCIRHRFDYGAIILLDERFQEERNR--AHISKWLRKSIKQYDSFDASLEGLK 734
RALNQA+GRCIRHR D+GA+IL+D+RF+ +R + +SKW+R+ I+ + +F+++LE L
Sbjct: 823 RALNQALGRCIRHRNDWGALILVDDRFRNNPSRYISGLSKWVRQQIQHHSTFESALESLA 882
Query: 735 SF 736
F
Sbjct: 883 EF 884
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 45/64 (70%), Gaps = 5/64 (7%)
Query: 18 YHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLA 77
Y +GG+++ FPY+ Y SQL M ++ L+ Q H LLESPTG+GKSL+LLCS LA
Sbjct: 8 YTIGGVKIYFPYKAYPSQLAMMNSILRGLNSKQ-----HCLLESPTGSGKSLALLCSALA 62
Query: 78 WQQN 81
WQQ+
Sbjct: 63 WQQS 66
>gi|57012613|sp|Q9BX63.1|FANCJ_HUMAN RecName: Full=Fanconi anemia group J protein; Short=Protein FACJ;
AltName: Full=ATP-dependent RNA helicase BRIP1; AltName:
Full=BRCA1-associated C-terminal helicase 1; AltName:
Full=BRCA1-interacting protein C-terminal helicase 1;
Short=BRCA1-interacting protein 1
gi|13661819|gb|AAK38111.1|AF360549_1 BRCA1-binding helicase-like protein BACH1 [Homo sapiens]
gi|75516497|gb|AAI01473.1| BRCA1 interacting protein C-terminal helicase 1 [Homo sapiens]
gi|75516501|gb|AAI01475.1| BRCA1 interacting protein C-terminal helicase 1 [Homo sapiens]
gi|313883612|gb|ADR83292.1| BRCA1 interacting protein C-terminal helicase 1 [synthetic
construct]
Length = 1249
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 246/722 (34%), Positives = 376/722 (52%), Gaps = 112/722 (15%)
Query: 98 TEAVTDPLANGGGFIPESQPSTI------PPSTNGQTAQVAMNNKNVKKKMTPTIFYASR 151
T + PL F P+ P N Q + + + K P I++ +R
Sbjct: 192 TVKLNSPLEKINSFSPQKPPGHCSRCCCSTKQGNSQESSNTIKKDHTGKSKIPKIYFGTR 251
Query: 152 THSQISQVISEYKKTAYR-VPMAVLASRKHYCTNKYVRDKENIDEEC-KLLLGDRNLGCP 209
TH QI+Q+ E ++TAY VPM +L+SR H C + V N +E+C +LL G C
Sbjct: 252 THKQIAQITRELRRTAYSGVPMTILSSRDHTCVHPEVVGNFNRNEKCMELLDGKNGKSCY 311
Query: 210 QFKNVHKVRGHPSLQ--KGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYS 267
+ VHK+ +LQ +G C + DIE+LV++G+ ++ C YY AR + DA ++FCPY+
Sbjct: 312 FYHGVHKISDQHTLQTFQGMC-KAWDIEELVSLGKKLKACPYYTARELIQDADIIFCPYN 370
Query: 268 YIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQVC--SV 325
Y+++ IR +M++++K ++ILDEAHNIED AR++ S + E L + EL+ + ++
Sbjct: 371 YLLDAQIRESMDLNLKEQVVILDEAHNIEDCARESASYSVTEVQLRFARDELDSMVNNNI 430
Query: 326 NPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRELQEANISRQCFPIL 385
++PL + L+ W+E L +R+++ W+G++ L L + I+ FPIL
Sbjct: 431 RKKDHEPLRAVCCSLINWLEANAEYLVERDYESACKIWSGNEMLLTLHKMGITTATFPIL 490
Query: 386 LECATKAIKE--------ATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQL 437
+ +++ + E+P +S + I L+GLF L Y F +N DY++
Sbjct: 491 QGHFSAVLQKEEKISPIYGKEEAREVPVISASTQIMLKGLFMVLDYLFRQNSRFADDYKI 550
Query: 438 ALQKYI------------------KRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSI 479
A+Q+ K ++ H L+ WCLNPAV F D+ +I
Sbjct: 551 AIQQTYSWTNQIDISDKNGLLVLPKNKKRSRQKTAVHVLNFWCLNPAVAFSDINGKVQTI 610
Query: 480 ILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTAD- 538
+LTSGTLSPM SFSSELGV F LEA H+I + QV I +GP L A+++ +
Sbjct: 611 VLTSGTLSPMKSFSSELGVTFTIQLEANHIIK-NSQVWVGTIGSGPKGRNLCATFQNTET 669
Query: 539 ---------------------------GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKG 571
YKL+EKL RW TG W L K + VEP+G
Sbjct: 670 FEFQDEVGALLLSVCQTVSQGILCFLPSYKLLEKLKERWLSTGLWHNLELVKTVIVEPQG 729
Query: 572 GSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCR 631
G + +F+ +L+ YY++I K +G D GA +AVCR
Sbjct: 730 GEKTNFDELLQVYYDAI--------------KYKGEKD-------------GALLVAVCR 762
Query: 632 GK---------------IVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAF 676
GK I +GIPFPN+ D+QV LK++YND + + LL G +WY QA+
Sbjct: 763 GKVSEGLDFSDDNARAVITIGIPFPNVKDLQVELKRQYNDHHSKLRGLLPGRQWYEIQAY 822
Query: 677 RALNQAIGRCIRHRFDYGAIILLDERFQEERNR--AHISKWLRKSIKQYDSFDASLEGLK 734
RALNQA+GRCIRHR D+GA+IL+D+RF+ +R + +SKW+R+ I+ + +F+++LE L
Sbjct: 823 RALNQALGRCIRHRNDWGALILVDDRFRNNPSRYISGLSKWVRQQIQHHSTFESALESLA 882
Query: 735 SF 736
F
Sbjct: 883 EF 884
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 45/64 (70%), Gaps = 5/64 (7%)
Query: 18 YHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLA 77
Y +GG+++ FPY+ Y SQL M ++ L+ Q H LLESPTG+GKSL+LLCS LA
Sbjct: 8 YTIGGVKIYFPYKAYPSQLAMMNSILRGLNSKQ-----HCLLESPTGSGKSLALLCSALA 62
Query: 78 WQQN 81
WQQ+
Sbjct: 63 WQQS 66
>gi|148683833|gb|EDL15780.1| BRCA1 interacting protein C-terminal helicase 1, isoform CRA_b [Mus
musculus]
Length = 1180
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 241/673 (35%), Positives = 360/673 (53%), Gaps = 108/673 (16%)
Query: 144 PTIFYASRTHSQISQVISEYKKTAYR-VPMAVLASRKHYCTNKYVRDKENIDEEC-KLLL 201
P I++ +RTH QI+Q+ E +KTAY VPM +L+SR H C + V N E+C +LL
Sbjct: 253 PKIYFGTRTHKQIAQITRELRKTAYSGVPMTILSSRDHSCVHPEVVGNFNRKEKCMELLD 312
Query: 202 GDRNLGCPQFKNVHKVRGHPSLQK-GGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQ 260
G C + VHK+ +LQ G DIE+LV++G+ ++ C YY AR + +DA
Sbjct: 313 GKHGKSCYFYHGVHKISNQQTLQHLQGMSRAWDIEELVSLGRKLKACPYYTARELIEDAD 372
Query: 261 LVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELE 320
+VFCPY+Y+++ IR M++ +KG ++ILDEAHNIED AR++ S + E L + EL+
Sbjct: 373 IVFCPYNYLLDSQIRETMDIKLKGQVVILDEAHNIEDCARESASYSVTEVQLRFARDELD 432
Query: 321 QVCSVN--PMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRELQEANIS 378
+ + N ++PL ++ +L+ W+E L +R ++ W+G++ L L I+
Sbjct: 433 SLINGNIRKKSHEPLRDVCYNLINWLETNSKHLVERGYESSCKIWSGNEMLLNLYRMGIT 492
Query: 379 RQCFPILLECATKAIKE--------ATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGS 430
FP+L + +++ + ++P +S + + L+GLF L Y F N
Sbjct: 493 TATFPVLQRHLSAVLQKEEKVTPIHGKEEAIQIPIISASTQVVLKGLFMVLDYLFRENSR 552
Query: 431 HVSDYQLALQKYI--------------------KRDSKNPGGNWTHTLSLWCLNPAVVFK 470
DY++A+Q+ K+ S+ G + L+ WCLNPAV F
Sbjct: 553 FADDYKVAIQQTYSWTNQIAIFDKTGVLAVPKNKKHSRQKIG--VNALNFWCLNPAVAFS 610
Query: 471 DVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPL 530
D+ + +I+LTSGTLSP+ SFSSELGV F LEA HVI + QV + +GP L
Sbjct: 611 DINDKVRTIVLTSGTLSPLKSFSSELGVTFSIQLEANHVIS-NSQVWVGTVGSGPKGRNL 669
Query: 531 NASYKTAD----------------------------GYKLMEKLCNRWRETGQWSRLNAK 562
A+++ + YKL+EKL RW TG W L +
Sbjct: 670 CATFQHTETFEFQDEVGMLLLSVCQTVSQGILCFLPSYKLLEKLRERWIFTGLWHSLESV 729
Query: 563 KPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKK 622
K + EP+GG + DF+ +L+ YY++I K +G D
Sbjct: 730 KTVIAEPQGGEKTDFDELLQVYYDAI--------------KFKGEKD------------- 762
Query: 623 GASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSG 667
GA +AVCRGK I VGIPFPN+ D+QV LK++YND + S+ LL G
Sbjct: 763 GALLIAVCRGKVSEGLDFSDDNARAVITVGIPFPNVKDLQVELKRQYNDHHSKSRGLLPG 822
Query: 668 NEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNR--AHISKWLRKSIKQYDS 725
+WY QA+RALNQA+GRCIRH+ D+GA+IL+D+RF NR + +SKW+R+ I+ + S
Sbjct: 823 RQWYEIQAYRALNQALGRCIRHKNDWGALILVDDRFNNNPNRYISGLSKWVRQQIQHHSS 882
Query: 726 FDASLEGLKSFFR 738
F ++LE L F R
Sbjct: 883 FASALESLTEFSR 895
Score = 73.2 bits (178), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 47/67 (70%), Gaps = 5/67 (7%)
Query: 15 LNAYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCS 74
L+ Y +GG+++ FP + Y +QL M ++ L+ +Q H LLESPTG+GKSL+LLCS
Sbjct: 11 LSDYTIGGVKIHFPCRAYPAQLAMMNSIVRGLNSSQ-----HCLLESPTGSGKSLALLCS 65
Query: 75 TLAWQQN 81
LAWQQ+
Sbjct: 66 ALAWQQS 72
>gi|397486822|ref|XP_003814520.1| PREDICTED: Fanconi anemia group J protein [Pan paniscus]
Length = 1249
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 246/722 (34%), Positives = 376/722 (52%), Gaps = 112/722 (15%)
Query: 98 TEAVTDPLANGGGFIPESQPSTI------PPSTNGQTAQVAMNNKNVKKKMTPTIFYASR 151
T + PL F P+ P N Q + + + K P I++ +R
Sbjct: 192 TVKLNSPLEKINSFSPQKPPGHCSRCCCSTKQGNSQESSNTIKKDHTGKSKIPKIYFGTR 251
Query: 152 THSQISQVISEYKKTAYR-VPMAVLASRKHYCTNKYVRDKENIDEEC-KLLLGDRNLGCP 209
TH QI+Q+ E ++TAY VPM +L+SR H C + V N +E+C +LL G C
Sbjct: 252 THKQIAQITRELRRTAYSGVPMTILSSRDHTCVHPEVVGNFNRNEKCMELLDGKNGKSCY 311
Query: 210 QFKNVHKVRGHPSLQ--KGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYS 267
+ VHK+ +LQ +G C + DIE+LV++G+ ++ C YY AR + DA ++FCPY+
Sbjct: 312 FYHGVHKISDQHTLQTFQGMC-KAWDIEELVSLGKKLKSCPYYTARELIQDADIIFCPYN 370
Query: 268 YIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQVC--SV 325
Y+++ IR +M++++K ++ILDEAHNIED AR++ S + E L + EL+ + ++
Sbjct: 371 YLLDAQIRESMDLNLKEQVVILDEAHNIEDCARESASYSVTEVQLRFARDELDSMVNNNI 430
Query: 326 NPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRELQEANISRQCFPIL 385
++PL + L+ W+E L +R+++ W+G++ L L + I+ FPIL
Sbjct: 431 RKKDHEPLRAVCCSLINWLEANAEYLVERDYESACKIWSGNEMLLTLHKMGITTATFPIL 490
Query: 386 LECATKAIKE--------ATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQL 437
+ +++ + E+P +S + I L+GLF L Y F +N DY++
Sbjct: 491 QGHFSAVLQKEEKISPIYGKEEAREVPVISASTQIMLKGLFMVLDYLFRQNSRFADDYKI 550
Query: 438 ALQKYI------------------KRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSI 479
A+Q+ K ++ H L+ WCLNPAV F D+ +I
Sbjct: 551 AIQQTYSWTNQIDISDKNGLLVLPKNKKRSRQKTAVHVLNFWCLNPAVAFSDINGKVQTI 610
Query: 480 ILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTAD- 538
+LTSGTLSPM SFSSELGV F LEA H+I + QV I +GP L A+++ +
Sbjct: 611 VLTSGTLSPMKSFSSELGVTFTIQLEANHIIK-NSQVWVGTIGSGPKGRNLCATFQNTET 669
Query: 539 ---------------------------GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKG 571
YKL+EKL RW TG W L K + VEP+G
Sbjct: 670 FEFQDEVGALLLSVCQTVSQGILCFLPSYKLLEKLKERWLSTGLWHNLELVKTVIVEPQG 729
Query: 572 GSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCR 631
G + +F+ +L+ YY++I K +G D GA +AVCR
Sbjct: 730 GEKTNFDELLQVYYDAI--------------KYKGEKD-------------GALLVAVCR 762
Query: 632 GK---------------IVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAF 676
GK I +GIPFPN+ D+QV LK++YND + + LL G +WY QA+
Sbjct: 763 GKVSEGLDFSDDNARAVITIGIPFPNVKDLQVELKRQYNDHHSKLRGLLPGRQWYEIQAY 822
Query: 677 RALNQAIGRCIRHRFDYGAIILLDERFQEERNR--AHISKWLRKSIKQYDSFDASLEGLK 734
RALNQA+GRCIRHR D+GA+IL+D+RF+ +R + +SKW+R+ I+ + +F+++LE L
Sbjct: 823 RALNQALGRCIRHRNDWGALILVDDRFRNNPSRYISGLSKWVRQQIQHHSTFESALESLA 882
Query: 735 SF 736
F
Sbjct: 883 EF 884
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 45/64 (70%), Gaps = 5/64 (7%)
Query: 18 YHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLA 77
Y +GG+++ FPY+ Y SQL M ++ L+ Q H LLESPTG+GKSL+LLCS LA
Sbjct: 8 YTIGGVKIYFPYKAYPSQLAMMNSILRGLNSKQ-----HCLLESPTGSGKSLALLCSALA 62
Query: 78 WQQN 81
WQQ+
Sbjct: 63 WQQS 66
>gi|114669761|ref|XP_511607.2| PREDICTED: Fanconi anemia group J protein [Pan troglodytes]
gi|410223276|gb|JAA08857.1| BRCA1 interacting protein C-terminal helicase 1 [Pan troglodytes]
gi|410257750|gb|JAA16842.1| BRCA1 interacting protein C-terminal helicase 1 [Pan troglodytes]
gi|410303552|gb|JAA30376.1| BRCA1 interacting protein C-terminal helicase 1 [Pan troglodytes]
gi|410331379|gb|JAA34636.1| BRCA1 interacting protein C-terminal helicase 1 [Pan troglodytes]
Length = 1249
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 246/722 (34%), Positives = 376/722 (52%), Gaps = 112/722 (15%)
Query: 98 TEAVTDPLANGGGFIPESQPSTI------PPSTNGQTAQVAMNNKNVKKKMTPTIFYASR 151
T + PL F P+ P N Q + + + K P I++ +R
Sbjct: 192 TVKLNSPLEKINSFSPQKPPGHCSRCCCSTKQGNSQESSNTIKKDHTGKSKIPKIYFGTR 251
Query: 152 THSQISQVISEYKKTAYR-VPMAVLASRKHYCTNKYVRDKENIDEEC-KLLLGDRNLGCP 209
TH QI+Q+ E ++TAY VPM +L+SR H C + V N +E+C +LL G C
Sbjct: 252 THKQIAQITRELRRTAYSGVPMTILSSRDHTCVHPEVVGNFNRNEKCMELLDGKNGKSCY 311
Query: 210 QFKNVHKVRGHPSLQ--KGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYS 267
+ VHK+ +LQ +G C + DIE+LV++G+ ++ C YY AR + DA ++FCPY+
Sbjct: 312 FYHGVHKISDQHTLQTFQGMC-KAWDIEELVSLGKKLKSCPYYTARELIQDADIIFCPYN 370
Query: 268 YIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQVC--SV 325
Y+++ IR +M++++K ++ILDEAHNIED AR++ S + E L + EL+ + ++
Sbjct: 371 YLLDAQIRESMDLNLKEQVVILDEAHNIEDCARESASYSVTEVQLRFARDELDSMVNNNI 430
Query: 326 NPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRELQEANISRQCFPIL 385
++PL + L+ W+E L +R+++ W+G++ L L + I+ FPIL
Sbjct: 431 RKKDHEPLRAVCCSLINWLEANAEYLVERDYESACKIWSGNEMLLTLHKMGITTATFPIL 490
Query: 386 LECATKAIKE--------ATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQL 437
+ +++ + E+P +S + I L+GLF L Y F +N DY++
Sbjct: 491 QGHFSAVLQKEEKISPIYGKEEAREVPVISASTQIMLKGLFMVLDYLFRQNSRFADDYKI 550
Query: 438 ALQKYI------------------KRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSI 479
A+Q+ K ++ H L+ WCLNPAV F D+ +I
Sbjct: 551 AIQQTYSWTNQIDISDKNGLLVLPKNKKRSRQKTAVHVLNFWCLNPAVAFSDINGKVQTI 610
Query: 480 ILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTAD- 538
+LTSGTLSPM SFSSELGV F LEA H+I + QV I +GP L A+++ +
Sbjct: 611 VLTSGTLSPMKSFSSELGVTFTIQLEANHIIK-NSQVWVGTIGSGPKGRNLCATFQNTET 669
Query: 539 ---------------------------GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKG 571
YKL+EKL RW TG W L K + VEP+G
Sbjct: 670 FEFQDEVGALLLSVCQTVSQGILCFLPSYKLLEKLKERWLSTGLWHNLELVKTVIVEPQG 729
Query: 572 GSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCR 631
G + +F+ +L+ YY++I K +G D GA +AVCR
Sbjct: 730 GEKTNFDELLQVYYDAI--------------KYKGEKD-------------GALLVAVCR 762
Query: 632 GK---------------IVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAF 676
GK I +GIPFPN+ D+QV LK++YND + + LL G +WY QA+
Sbjct: 763 GKVSEGLDFSDDNARAVITIGIPFPNVKDLQVELKRQYNDHHSKLRGLLPGRQWYEIQAY 822
Query: 677 RALNQAIGRCIRHRFDYGAIILLDERFQEERNR--AHISKWLRKSIKQYDSFDASLEGLK 734
RALNQA+GRCIRHR D+GA+IL+D+RF+ +R + +SKW+R+ I+ + +F+++LE L
Sbjct: 823 RALNQALGRCIRHRNDWGALILVDDRFRNNPSRYISGLSKWVRQQIQHHSTFESALESLA 882
Query: 735 SF 736
F
Sbjct: 883 EF 884
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 45/64 (70%), Gaps = 5/64 (7%)
Query: 18 YHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLA 77
Y +GG+++ FPY+ Y SQL M ++ L+ Q H LLESPTG+GKSL+LLCS LA
Sbjct: 8 YTIGGVKIYFPYKAYPSQLAMMNSILRGLNSKQ-----HCLLESPTGSGKSLALLCSALA 62
Query: 78 WQQN 81
WQQ+
Sbjct: 63 WQQS 66
>gi|74138560|dbj|BAE41179.1| unnamed protein product [Mus musculus]
gi|74216986|dbj|BAE26603.1| unnamed protein product [Mus musculus]
Length = 898
Score = 418 bits (1074), Expect = e-113, Method: Compositional matrix adjust.
Identities = 240/673 (35%), Positives = 360/673 (53%), Gaps = 108/673 (16%)
Query: 144 PTIFYASRTHSQISQVISEYKKTAYR-VPMAVLASRKHYCTNKYVRDKENIDEEC-KLLL 201
P I++ +RTH QI+Q+ E +KTAY VPM +L+SR H C + V N E+C +LL
Sbjct: 247 PKIYFGTRTHKQIAQITRELRKTAYSGVPMTILSSRDHSCVHPEVVGNFNRKEKCMELLD 306
Query: 202 GDRNLGCPQFKNVHKVRGHPSLQK-GGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQ 260
G C + VHK+ +LQ G DIE+LV++G+ ++ C YY AR + +DA
Sbjct: 307 GKHGKSCYFYHGVHKISNQQTLQHLQGMSRAWDIEELVSLGRKLKACPYYTARELIEDAD 366
Query: 261 LVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELE 320
+VFCPY+Y+++ IR M++ +KG ++ILDEAHNIED AR++ S + E L + EL+
Sbjct: 367 IVFCPYNYLLDSQIRETMDIKLKGQVVILDEAHNIEDCARESASYSVTEVQLRFARDELD 426
Query: 321 QVC--SVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRELQEANIS 378
+ ++ ++PL ++ +L+ W+E L +R ++ W+G++ L L I+
Sbjct: 427 SLINGNIRKKSHEPLRDVCYNLINWLETNSKHLVERGYESSCKIWSGNEMLLNLYRMGIT 486
Query: 379 RQCFPILLECATKAIKE--------ATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGS 430
FP+L + +++ + ++P +S + + L+GLF L Y F N
Sbjct: 487 TATFPVLQRHLSAVLQKEEKVTPIHGKEEAIQIPIISASTQVVLKGLFMVLDYLFRENSR 546
Query: 431 HVSDYQLALQKYI--------------------KRDSKNPGGNWTHTLSLWCLNPAVVFK 470
DY++A+Q+ K+ S+ G + L+ WCLNPAV F
Sbjct: 547 FADDYKVAIQQTYSWTNQIAIFDKTGVLAVPKNKKHSRQKIG--VNALNFWCLNPAVAFS 604
Query: 471 DVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPL 530
D+ + +I+LTSGTLSP+ SFSSELGV F LEA HVI + QV + +GP L
Sbjct: 605 DINDKVRTIVLTSGTLSPLKSFSSELGVTFSIQLEANHVIS-NSQVWVGTVGSGPKGRNL 663
Query: 531 NASYKTAD----------------------------GYKLMEKLCNRWRETGQWSRLNAK 562
A+++ + YKL+EKL RW TG W L +
Sbjct: 664 CATFQHTETFEFQDEVGMLLLSVCQTVSQGILCFLPSYKLLEKLRERWIFTGLWHSLESV 723
Query: 563 KPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKK 622
K + EP+GG + DF+ +L+ YY++I K +G D
Sbjct: 724 KTVIAEPQGGEKTDFDELLQVYYDAI--------------KFKGEKD------------- 756
Query: 623 GASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSG 667
GA +AVCRGK I VGIPFPN+ D+QV LK++YND + S+ LL G
Sbjct: 757 GALLIAVCRGKVSEGLDFSDDNARAVITVGIPFPNVKDLQVELKRQYNDHHSKSRGLLPG 816
Query: 668 NEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNR--AHISKWLRKSIKQYDS 725
+WY QA+RALNQA+GRCIRH+ D+GA+IL+D+RF NR + +SKW+R+ I+ + S
Sbjct: 817 RQWYEIQAYRALNQALGRCIRHKNDWGALILVDDRFNNNPNRYISGLSKWVRQQIQHHSS 876
Query: 726 FDASLEGLKSFFR 738
F ++LE L F R
Sbjct: 877 FASALESLTEFSR 889
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 47/67 (70%), Gaps = 5/67 (7%)
Query: 15 LNAYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCS 74
L+ Y +GG+++ FP + Y +QL M ++ L+ +Q H LLESPTG+GKSL+LLCS
Sbjct: 5 LSDYTIGGVKIHFPCRAYPAQLAMMNSIVRGLNSSQ-----HCLLESPTGSGKSLALLCS 59
Query: 75 TLAWQQN 81
LAWQQ+
Sbjct: 60 ALAWQQS 66
>gi|297486418|ref|XP_002695655.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group J protein,
partial [Bos taurus]
gi|296477040|tpg|DAA19155.1| TPA: BRCA1 interacting protein C-terminal helicase 1 [Bos taurus]
Length = 1169
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 238/670 (35%), Positives = 359/670 (53%), Gaps = 103/670 (15%)
Query: 144 PTIFYASRTHSQISQVISEYKKTAYR-VPMAVLASRKHYCTNKYVRDKENIDEEC-KLLL 201
P I++ +RTH QI+Q+ E ++TAY VPM +L+SR H C + V N +E+C +LL
Sbjct: 180 PKIYFGTRTHKQIAQITRELQRTAYSGVPMTILSSRDHTCVHPEVMGNFNRNEKCMELLD 239
Query: 202 GDRNLGCPQFKNVHKVRGHPSLQK-GGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQ 260
G C + VHK+ +LQ G H+ DIE+LV++G+ ++ C YY AR + +A
Sbjct: 240 GKNGKSCYFYHGVHKMSDQHTLQTFQGMHKAWDIEELVSLGRKLKACPYYTARELMQNAD 299
Query: 261 LVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELE 320
++FCPY+Y+++ IR M++++K ++ILDEAHNIED AR++ S + E L + EL+
Sbjct: 300 IIFCPYNYLLDAQIRETMDINLKEQVVILDEAHNIEDCARESASYSVTEVQLRFARDELD 359
Query: 321 QVCSVN--PMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRELQEANIS 378
+ + N ++PL + L+ W+E L +R ++ W+G + L L + I+
Sbjct: 360 SMINYNIRKKDHEPLRAVCCSLINWLEASSEHLVERNYESSCKVWSGSEMLLNLHKMGIT 419
Query: 379 RQCFPILLECATKAIKEATDTES--------ELPHLSGMSVITLEGLFSSLTYFFSRNGS 430
FPIL + ++ S E+P +S + I L+GLF L Y F +N
Sbjct: 420 TATFPILQGHFSAVLQREEKVPSIHGKEEAREIPVISASTQIMLKGLFMVLDYLFRQNSR 479
Query: 431 HVSDYQLALQK---YIKRDSKNPGG--------------NWTHTLSLWCLNPAVVFKDVA 473
DY++A+Q+ +I + G L+ WCLNPAV F D+
Sbjct: 480 FADDYKVAIQQTYSWINQSDTTDHGLLILSKNKKRLRQKAAVRVLNFWCLNPAVAFSDIN 539
Query: 474 ELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNAS 533
+I+LTSGTLSPM SFSSELGV F LEA HVI+ + QV I +GP L A+
Sbjct: 540 GKVWAIVLTSGTLSPMKSFSSELGVTFTIQLEANHVIN-NSQVWVGTIGSGPKGRSLCAT 598
Query: 534 YKTAD----------------------------GYKLMEKLCNRWRETGQWSRLNAKKPL 565
++ + YKL+EKL RW TG W L K +
Sbjct: 599 FQHTETFEFQDEVGALLLSVCQTISQGILCFLPSYKLLEKLKERWLSTGLWYNLELVKTV 658
Query: 566 FVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGAS 625
VEP+GG + DF+ +L+ YY++I K +G D GA
Sbjct: 659 IVEPQGGEKIDFDELLQMYYDAI--------------KYKGEKD-------------GAL 691
Query: 626 FLAVCRGK---------------IVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSGNEW 670
+AVCRGK + +GIPFPN+ D+QV LK++YND + + LL G +W
Sbjct: 692 LVAVCRGKVSEGLDFSDDNARAVVTIGIPFPNVKDLQVELKRQYNDQHSKLRGLLPGRQW 751
Query: 671 YCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNR--AHISKWLRKSIKQYDSFDA 728
Y QA+RALNQA+GRCIRH+ D+GA+IL+D+RF+ +R + +SKW+R+ I+ + +F++
Sbjct: 752 YEIQAYRALNQALGRCIRHKNDWGALILVDDRFRSNPSRYISGLSKWVRQLIQHHSTFES 811
Query: 729 SLEGLKSFFR 738
+LE L F +
Sbjct: 812 ALESLAEFAK 821
>gi|297462303|ref|XP_002702129.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group J protein [Bos
taurus]
Length = 1232
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 238/670 (35%), Positives = 359/670 (53%), Gaps = 103/670 (15%)
Query: 144 PTIFYASRTHSQISQVISEYKKTAYR-VPMAVLASRKHYCTNKYVRDKENIDEEC-KLLL 201
P I++ +RTH QI+Q+ E ++TAY VPM +L+SR H C + V N +E+C +LL
Sbjct: 243 PKIYFGTRTHKQIAQITRELQRTAYSGVPMTILSSRDHTCVHPEVMGNFNRNEKCMELLD 302
Query: 202 GDRNLGCPQFKNVHKVRGHPSLQK-GGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQ 260
G C + VHK+ +LQ G H+ DIE+LV++G+ ++ C YY AR + +A
Sbjct: 303 GKNGKSCYFYHGVHKMSDQHTLQTFQGMHKAWDIEELVSLGRKLKACPYYTARELMQNAD 362
Query: 261 LVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELE 320
++FCPY+Y+++ IR M++++K ++ILDEAHNIED AR++ S + E L + EL+
Sbjct: 363 IIFCPYNYLLDAQIRETMDINLKEQVVILDEAHNIEDCARESASYSVTEVQLRFARDELD 422
Query: 321 QVCSVN--PMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRELQEANIS 378
+ + N ++PL + L+ W+E L +R ++ W+G + L L + I+
Sbjct: 423 SMINYNIRKKDHEPLRAVCCSLINWLEASSEHLVERNYESSCKVWSGSEMLLNLHKMGIT 482
Query: 379 RQCFPILLECATKAIKEATDTES--------ELPHLSGMSVITLEGLFSSLTYFFSRNGS 430
FPIL + ++ S E+P +S + I L+GLF L Y F +N
Sbjct: 483 TATFPILQGHFSAVLQREEKVPSIHGKEEAREIPVISASTQIMLKGLFMVLDYLFRQNSR 542
Query: 431 HVSDYQLALQK---YIKRDSKNPGG--------------NWTHTLSLWCLNPAVVFKDVA 473
DY++A+Q+ +I + G L+ WCLNPAV F D+
Sbjct: 543 FADDYKVAIQQTYSWINQSDTTDHGLLILSKNKKRLRQKAAVRVLNFWCLNPAVAFSDIN 602
Query: 474 ELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNAS 533
+I+LTSGTLSPM SFSSELGV F LEA HVI+ + QV I +GP L A+
Sbjct: 603 GKVWAIVLTSGTLSPMKSFSSELGVTFTIQLEANHVIN-NSQVWVGTIGSGPKGRSLCAT 661
Query: 534 YKTAD----------------------------GYKLMEKLCNRWRETGQWSRLNAKKPL 565
++ + YKL+EKL RW TG W L K +
Sbjct: 662 FQHTETFEFQDEVGALLLSVCQTISQGILCFLPSYKLLEKLKERWLSTGLWYNLELVKTV 721
Query: 566 FVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGAS 625
VEP+GG + DF+ +L+ YY++I K +G D GA
Sbjct: 722 IVEPQGGEKIDFDELLQMYYDAI--------------KYKGEKD-------------GAL 754
Query: 626 FLAVCRGK---------------IVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSGNEW 670
+AVCRGK + +GIPFPN+ D+QV LK++YND + + LL G +W
Sbjct: 755 LVAVCRGKVSEGLDFSDDNARAVVTIGIPFPNVKDLQVELKRQYNDQHSKLRGLLPGRQW 814
Query: 671 YCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNR--AHISKWLRKSIKQYDSFDA 728
Y QA+RALNQA+GRCIRH+ D+GA+IL+D+RF+ +R + +SKW+R+ I+ + +F++
Sbjct: 815 YEIQAYRALNQALGRCIRHKNDWGALILVDDRFRSNPSRYISGLSKWVRQLIQHHSTFES 874
Query: 729 SLEGLKSFFR 738
+LE L F +
Sbjct: 875 ALESLAEFAK 884
Score = 72.4 bits (176), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 44/64 (68%), Gaps = 5/64 (7%)
Query: 18 YHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLA 77
Y +GG+++ FP + Y SQL M ++ L+ Q H LLESPTG+GKSL+LLCS LA
Sbjct: 7 YTIGGVKINFPCKAYPSQLAMMNSIVRGLNSKQ-----HCLLESPTGSGKSLALLCSALA 61
Query: 78 WQQN 81
WQQ+
Sbjct: 62 WQQS 65
>gi|297272722|ref|XP_002808171.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group J protein-like
[Macaca mulatta]
Length = 1151
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 272/821 (33%), Positives = 412/821 (50%), Gaps = 143/821 (17%)
Query: 18 YHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLA 77
Y +GG+++ FPY+ Y SQL M ++ L+ Q H LLESPTG+GKSL+LLCS LA
Sbjct: 8 YTIGGVKIYFPYKAYPSQLAMMNSILRGLNSKQ-----HCLLESPTGSGKSLALLCSALA 62
Query: 78 WQQNCKLKNQLANIS-------------HSKPDTEAVTDPLANGGGFIPESQPSTIPPST 124
WQQ+ K IS HSK T+ N G + PST PPS
Sbjct: 63 WQQSLSEKPADEGISGKTEVPLSCCCTCHSKD----FTNNDMNQGTSHHFNYPST-PPSE 117
Query: 125 NGQTAQVAMNNKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYRV-PMAVLAS-RKHYC 182
T+ ++ +K A + S +++ R+ P+ RK +C
Sbjct: 118 RKSTSLTCQDSP--EKTTLAAKLSAKKQASIYRDENDDFQVEKKRIRPLETTQQIRKRHC 175
Query: 183 TNKYVRDKE-NIDEECKLLLGD-----------RNLGCPQFKNVHKVRGHPSLQ--KGGC 228
V + + +D + L + C + VHK+ +LQ +G C
Sbjct: 176 FGTEVHNLDAKVDSGKTVKLNSPSGKINSFSPRKGKSCYFYHGVHKISDQHTLQTFQGMC 235
Query: 229 HEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILI 288
+ DIE+LV++G+ ++ C YY AR + DA ++FCPY+Y+++ IR +M++++K ++I
Sbjct: 236 -KAWDIEELVSLGKKLKACPYYTARELIQDADIIFCPYNYLLDAQIRESMDLNLKEQVVI 294
Query: 289 LDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQVC--SVNPMIYQPLIEMTQDLVGWIER 346
LDEAHNIED AR++ S I E L + EL+ + ++ ++PL + L+ W+E
Sbjct: 295 LDEAHNIEDCARESASYSITEVQLRFARDELDSMVNNNIRRKDHEPLRAVCYSLINWLEA 354
Query: 347 RKATLAKREFQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKE--------ATD 398
L +R+++ W+G++ L L + I+ FPIL + +++ +
Sbjct: 355 NSEYLVERDYESACKIWSGNEMLLNLHKMGITTATFPILQGHFSAVLQKEEKISPIYGKE 414
Query: 399 TESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYI----KRDSKNPGG-- 452
E+P +S + I L+GLF L Y F +N DY++A+Q+ + D + G
Sbjct: 415 EAREVPIISASTQIMLKGLFMVLDYLFRQNSRFADDYKIAIQQTYSWTNQIDISDKNGLL 474
Query: 453 ------------NWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQF 500
L+ WCLNPAV F D+ +I+LTSGTLSPM SFSSELGV F
Sbjct: 475 ILPKNKKLSRQKTAVRVLNFWCLNPAVAFSDINGKVQTIVLTSGTLSPMKSFSSELGVTF 534
Query: 501 GTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTAD---------------------- 538
LEA HVI + QV I +GP L A+++ +
Sbjct: 535 TVQLEANHVIK-NSQVWVGTIGSGPKGRNLCATFQNTETFEFQDEVGALLLSVCQTVSQG 593
Query: 539 ------GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGS 592
YKL+EKL RW TG W L K + VEP+GG + +F+ +L+ YY++I
Sbjct: 594 ILCFLPSYKLLEKLKERWLSTGLWHNLELVKTVIVEPQGGEKTNFDELLQVYYDAI---- 649
Query: 593 KCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVG 637
K +G D GA +AVCRGK I +G
Sbjct: 650 ----------KYKGEKD-------------GALLVAVCRGKVSEGLDFSDDNARAVITIG 686
Query: 638 IPFPNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAII 697
IPFPN+ D+QV LK++YND + + LL G +WY QA+RALNQA+GRCIRH+ D+GA+I
Sbjct: 687 IPFPNVKDLQVELKRRYNDHHSKLRGLLPGRQWYEIQAYRALNQALGRCIRHQNDWGALI 746
Query: 698 LLDERFQEERNR--AHISKWLRKSIKQYDSFDASLEGLKSF 736
L+D+RF+ +R + +SKW+R+ I+ + +F+++LE L F
Sbjct: 747 LVDDRFRNNPSRYISGLSKWVRQQIQHHSTFESALESLAEF 787
>gi|410928893|ref|XP_003977834.1| PREDICTED: Fanconi anemia group J protein homolog [Takifugu
rubripes]
Length = 1109
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 246/720 (34%), Positives = 378/720 (52%), Gaps = 116/720 (16%)
Query: 105 LANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKK-----KMTPTIFYASRTHSQISQV 159
L G FI + Q P + G Q + +K+ K + P IF+ +RTH QI+QV
Sbjct: 166 LEQGVIFIDDDQE---PENAAGPCTQCSCASKDGAKDQNSNRRVPKIFFGTRTHKQITQV 222
Query: 160 ISEYKKTAY-RVPMAVLASRKHYCTNKYVRDKENIDEECKLLLGDRN-LGCPQFKNVHKV 217
E ++T Y +VPM +L+SR H C N V +E CK L ++ C + V K+
Sbjct: 223 AHELRRTVYSKVPMTILSSRDHTCVNPEVAPHSKRNELCKERLEAKDGRSCRYYHGVQKM 282
Query: 218 RGHPSLQK-GGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRG 276
LQ+ G E DIEDLV++G+ +R CSY+AAR + +A ++FCPY+Y+++P+IR
Sbjct: 283 GEQYLLQQVHGVSEAWDIEDLVSLGKRLRSCSYFAARELMAEAVIIFCPYNYLLDPLIRE 342
Query: 277 AMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQVC--SVNPMIYQPLI 334
+M++++ G IL+LDEAHNIED AR++ S ++ D LL + ELE + + ++PL
Sbjct: 343 SMDINLSGQILVLDEAHNIEDCARESASFTVNYDSLLASRDELESMVKNKIREAKHEPLQ 402
Query: 335 EMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIK 394
L+ WI+ ++ +++R ++ W+G + I+ F +L ++
Sbjct: 403 NFCYSLINWIQESQSLMSERGYESASKVWSGRDIVGIFHTLGITDATFNMLKANLAAVLE 462
Query: 395 E--------ATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQK----- 441
+ + ++P +S + L+GLF L Y F DY++ALQ+
Sbjct: 463 KEERLGFVNGKEDVVQIPTISSATSAVLKGLFMVLDYLFRDKCRFAEDYRVALQRSYAWT 522
Query: 442 -YIKRDSKNPGGNWTH----------------TLSLWCLNPAVVFKDVAELSLSIILTSG 484
+ D+ + G + TLS WCLNPAV F D++ SI+LTSG
Sbjct: 523 NQVPPDAPDAQGFFVRPRQRQRQSIRVKAEMLTLSFWCLNPAVAFSDLSNSLKSIVLTSG 582
Query: 485 TLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTAD------ 538
TLSPM SFSSELGV+F LEA HVI+ QV + GP L A+++ A+
Sbjct: 583 TLSPMGSFSSELGVKFSIQLEANHVINKS-QVWVGTVGAGPHGRKLCATFQHAETYTFQD 641
Query: 539 ----------------------GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQED 576
YK+++KL +RW TG W +L +K + EP+GG + D
Sbjct: 642 EVGALLLHVCQVMAKGVLCFLPSYKMLDKLRDRWSNTGLWEKLEQQKTVITEPRGGGKGD 701
Query: 577 FEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGK--- 633
F+ +L+ YY +I +G + + GA +AVCRGK
Sbjct: 702 FDELLQTYYEAI-KGCQ--------------------------ERDGALLIAVCRGKVSE 734
Query: 634 ------------IVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQ 681
+ +GIPFPNI D+QV LK KYND + S+ LLSG+ WY QA+RALNQ
Sbjct: 735 GLDFTDDNARAVVTIGIPFPNIKDLQVELKMKYNDQHAKSRGLLSGHRWYEIQAYRALNQ 794
Query: 682 AIGRCIRHRFDYGAIILLDERFQEERNR--AHISKWLRKSIKQYDSFDASLEGLKSFFRD 739
A+GRCIRHR D+GA+IL+D+R++ N+ +SKW+R+ ++ +D+F +++ L +F R+
Sbjct: 795 ALGRCIRHRNDWGALILVDDRYKNNPNKYITGLSKWVRQLVQHHDTFSNAMQSLGAFSRE 854
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 47/70 (67%), Gaps = 5/70 (7%)
Query: 18 YHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLA 77
Y +GG++++FP + Y SQL M +I L+ Q H LLESPTG+GKSL+LLCSTL
Sbjct: 8 YTIGGVKIQFPRKAYPSQLAMMNSIIRGLNTGQ-----HCLLESPTGSGKSLALLCSTLG 62
Query: 78 WQQNCKLKNQ 87
WQQ +K Q
Sbjct: 63 WQQAQYVKLQ 72
>gi|348567428|ref|XP_003469501.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group J protein-like
[Cavia porcellus]
Length = 1209
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 240/697 (34%), Positives = 369/697 (52%), Gaps = 104/697 (14%)
Query: 125 NGQTAQVAMNNKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYR-VPMAVLASRKHYCT 183
N Q + + + K P I++ +RTH QI+Q+ E +KTAY VPM +L+SR H C
Sbjct: 225 NNQESSNTIKKDHGGKFKRPKIYFGTRTHKQIAQITRELRKTAYSGVPMTILSSRDHTCV 284
Query: 184 NKYVRDKENIDEEC-KLLLGDRNLGCPQFKNVHKVRGHPSLQK-GGCHEVHDIEDLVNVG 241
+ V N +E+C +LL G C + V+K+ + Q G H+ DIE+LV++G
Sbjct: 285 HPEVVGNFNRNEKCMELLDGKNGKSCYFYHGVNKISDQHTFQALQGMHKAWDIEELVSLG 344
Query: 242 QVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARD 301
+ ++ C YY AR + + A ++FCPY+Y+++ IR +M++++K ++ILDEAHNIED AR+
Sbjct: 345 RKLKACPYYTARELTEGADIIFCPYNYLLDAQIRESMDINLKEQVVILDEAHNIEDCARE 404
Query: 302 AGSVDIDEDVLLKLQMELEQVCS--VNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHF 359
+ S + E L + EL+ + S + ++PL + L+ W+E L +R+++
Sbjct: 405 SASYSVTEVQLRFARDELDSMVSNNIRKRDHEPLRAVCCSLINWLEANTEHLVERDYESS 464
Query: 360 FSCWTGDKALRELQEANISRQCFPILLECATKAIKE--------ATDTESELPHLSGMSV 411
WTG++ L L + I+ FPIL + +++ + E+P +S +
Sbjct: 465 CKIWTGNEMLLNLYKMGITAATFPILQGHFSSVLQKEEKVSPIYGKEETVEVPIISASTQ 524
Query: 412 ITLEGLFSSLTYFFSRNGSHVSDYQLALQK-----------------YIKRDSKNPGGNW 454
I L+GLF L Y F +N DY++A+Q+ + ++ ++
Sbjct: 525 IMLKGLFMVLDYLFRQNSRFADDYKIAIQQTYSWTHHTDMSDKSEFFVLPKNKRSRQKIA 584
Query: 455 THTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDL 514
H L+ WCLNPAV F D+ +I+LTSGTLSPMNSFSSELGV F LEA HVI+ +
Sbjct: 585 VHVLNFWCLNPAVAFSDINGRVRTIVLTSGTLSPMNSFSSELGVTFTIQLEANHVIN-NS 643
Query: 515 QVLTSVISTGPDNYPLNASYKTAD----------------------------GYKLMEKL 546
QV I +GP L A+++ + YKL+EKL
Sbjct: 644 QVWVGTIGSGPKGRNLCATFQHIETFEFQDEVGALLLSVCQTVGQGILCFLPSYKLLEKL 703
Query: 547 CNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREG 606
RW TG W L K + VEP+ G + DF+ +L+ YY++I K G
Sbjct: 704 KERWISTGLWHNLELVKTVIVEPQRGEKTDFDELLQVYYDAI--------------KYRG 749
Query: 607 NNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLK 651
D GA +AVCRGK I +GIPFPN+ D+QV LK
Sbjct: 750 EKD-------------GALLVAVCRGKVSEGLDFSDDNARAVITIGIPFPNVKDLQVELK 796
Query: 652 KKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERN--- 708
+KYND + + LL G +WY QA+RALNQA+GRCIRH+ D+GA+ L+D+RF+ +
Sbjct: 797 RKYNDHHSKLRGLLPGRQWYEIQAYRALNQALGRCIRHKNDWGALFLVDDRFRSTQALYI 856
Query: 709 RAHISKWLRKSIKQYDSFDASLEGLKSFFRDVKGWVG 745
+SKW+R+ I+ + +F+++LE L F + + +G
Sbjct: 857 SXGLSKWVRQQIQHHSTFESALESLAEFSKKHQKVIG 893
Score = 72.8 bits (177), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 115/265 (43%), Gaps = 32/265 (12%)
Query: 18 YHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLA 77
Y +GG+++ FP + Y SQL M ++ L+ Q H LLESPTG+GKSL+LLCS LA
Sbjct: 8 YTIGGVKINFPCKAYPSQLAMMNCIVRGLNSRQ-----HCLLESPTGSGKSLALLCSALA 62
Query: 78 WQQNCKLK------NQLANI-------SHSKPDTEAVTDPLANGGGFIPESQPSTIPPST 124
WQQ+ K N+ A + HSK T + + F S P T P
Sbjct: 63 WQQSLSGKPVDEGLNKKAEVPLSCCCTCHSKSSTHSDVNQ-ETSHHF---SSPGTPLPER 118
Query: 125 NGQTA--QVAMNNKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYC 182
NG+++ Q + + K++ I AS+ + +E K+ R RK +C
Sbjct: 119 NGRSSICQNSPEKNTLAAKLSAKI-QASKYRDENDDFQAEKKRI--RPLETAQQIRKRHC 175
Query: 183 TNKYVRDKENIDEECKLL-----LGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDL 237
K V + D +L LG RN Q H + S ++G E +
Sbjct: 176 FEKEVHHSDAQDASGNILKLNSPLGKRNSFSSQNPPGHCSKCCCSAKQGNNQESSNTIKK 235
Query: 238 VNVGQVVRGCSYYAARSMADDAQLV 262
+ G+ R Y+ R+ AQ+
Sbjct: 236 DHGGKFKRPKIYFGTRTHKQIAQIT 260
>gi|334322387|ref|XP_001363088.2| PREDICTED: Fanconi anemia group J protein [Monodelphis domestica]
Length = 1179
Score = 415 bits (1066), Expect = e-112, Method: Compositional matrix adjust.
Identities = 284/863 (32%), Positives = 428/863 (49%), Gaps = 175/863 (20%)
Query: 15 LNAYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQR--------DGHCHALLESPTGTG 66
L+ Y +GG+++ FP + Y SQL M ++ L+ Q G ALL S
Sbjct: 5 LSEYIIGGVKIHFPCKAYPSQLALMNSIVRGLNSKQHCLLESPTGSGKSLALLCSALAWQ 64
Query: 67 KSLSLLCS---TLAWQQNCKLKNQLANISHSKPD-------------------------- 97
+SLS + TLA + + K Q + +S K D
Sbjct: 65 QSLSEDSTPKITLAAKLSAK--KQASLLSDEKDDFQIDKKRIRPLETKQQVRKRPCFAKE 122
Query: 98 ----TEAVT--------DPLANGGGFIPESQP--STIPP--------STNGQTAQVAMNN 135
E VT PL F P+ + PP S + +QV +
Sbjct: 123 VYDLDEKVTPERIMKPNSPLGKKISFSPQKSMYYNLHPPGPCTWCSCSIKSEKSQV---D 179
Query: 136 KNVKKK------MTPTIFYASRTHSQISQVISEYKKTAYR-VPMAVLASRKHYCTNKYVR 188
N+ KK P IF+ +RTH QI+Q+ E ++T+Y V M +L+SR H C + V
Sbjct: 180 DNITKKEHGGKFKIPKIFFGTRTHKQIAQITRELRRTSYSGVRMTILSSRDHTCVHPEVT 239
Query: 189 DKENIDEECKLLLGDRNLGCPQFKN-VHKVRGHPSLQK--GGCHEVHDIEDLVNVGQVVR 245
N +E+C L+ +N F + VHK+ +LQ G C DIEDLV++G+ ++
Sbjct: 240 GNFNRNEKCMELMDGKNGKSCYFNHGVHKMSEQQALQTFPGMCR-AWDIEDLVSLGKKLK 298
Query: 246 GCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSV 305
C YYAAR + DA +VFCPY+Y+++ IR +M++++K I+ILDEAHNIE+ AR++ S
Sbjct: 299 ACPYYAARELMLDADIVFCPYNYLLDSQIRESMDINLKEQIIILDEAHNIEECARESASY 358
Query: 306 DIDEDVLLKLQMELEQVCS--VNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCW 363
+ E L + EL+ + S + ++PL + L+ W++ L +R+++ W
Sbjct: 359 SVTEIQLRFARDELDSMVSNNIRKKDHEPLRAVCYSLLNWLQENSKHLEERDYESSCKVW 418
Query: 364 TGDKALRELQEANISRQCFPILLECATKAIKE--------ATDTESELPHLSGMSVITLE 415
+G++ + L + I+ FPIL T +++ + E+P +S + I L+
Sbjct: 419 SGNEMISHLYKMGITAATFPILQGHFTAVLQKEEKFMLLNGKEQVKEIPIVSPSTQIMLK 478
Query: 416 GLFSSLTYFFSRNGSHVSDYQLALQK---YIKRDSKNPGGNW--------------THTL 458
GLF L Y F +N DY++A+Q+ + + D + G + H L
Sbjct: 479 GLFMVLDYLFRQNSRFADDYKVAIQRTYSWTQIDIPDKNGFFAIPKNKKRSRQKMAVHVL 538
Query: 459 SLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLT 518
+ WCLNPAV F D++ +I+LTSGTLSPMNSFSSELGV F LEA HVI + QV
Sbjct: 539 NFWCLNPAVAFLDISSKVRTIVLTSGTLSPMNSFSSELGVTFAIQLEANHVIQ-NSQVWV 597
Query: 519 SVISTGPDNYPLNASYKTAD----------------------------GYKLMEKLCNRW 550
I +GP L A+++ + YKL+EKL RW
Sbjct: 598 GTIGSGPKGRNLCATFQHTETFAFQDEVGALLLSVCQTVGQGILCFLPSYKLLEKLKERW 657
Query: 551 RETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDL 610
TG W+ L K + EP + F+ VL+ YY++I KC +G+ D
Sbjct: 658 IHTGLWNNLELVKTVITEPPRAEKAAFDEVLQVYYDAI----KC----------KGDRD- 702
Query: 611 NTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKKYN 655
GA +AVCRGK I +GIPFPN+ D+QV LK+KYN
Sbjct: 703 ------------GALLMAVCRGKVSEGLDFSDENARAVITIGIPFPNMKDLQVELKRKYN 750
Query: 656 DTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNR--AHIS 713
D + + LL G +WY QA+RALNQA+GRCIRH+ D+GA+IL+D+RF+ +R + +S
Sbjct: 751 DQHSKLRGLLPGRQWYEIQAYRALNQALGRCIRHKNDWGALILVDDRFRSNPDRYISGLS 810
Query: 714 KWLRKSIKQYDSFDASLEGLKSF 736
KW+R+ IK + +F+++L+ L F
Sbjct: 811 KWVRQQIKHHTTFESALKSLAVF 833
>gi|109488700|ref|XP_340870.3| PREDICTED: Fanconi anemia group J protein homolog [Rattus
norvegicus]
gi|109491562|ref|XP_001081096.1| PREDICTED: Fanconi anemia group J protein homolog [Rattus
norvegicus]
Length = 1166
Score = 414 bits (1063), Expect = e-112, Method: Compositional matrix adjust.
Identities = 236/671 (35%), Positives = 361/671 (53%), Gaps = 108/671 (16%)
Query: 144 PTIFYASRTHSQISQVISEYKKTAYR-VPMAVLASRKHYCTNKYVRDKENIDEEC-KLLL 201
P I++ +RTH QI+Q+ E +KTAY VPM +L+SR H C + V N +E+C +LL
Sbjct: 241 PKIYFGTRTHKQIAQITRELRKTAYSGVPMTILSSRDHTCVHPEVVGNFNRNEKCMELLD 300
Query: 202 GDRNLGCPQFKNVHKVRGHPSLQ-KGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQ 260
G C + VH++ +LQ G + DIE+LV++G+ ++ C YY AR + D A
Sbjct: 301 GKHGKSCYFYHGVHRISNQQTLQFLHGISKAWDIEELVSLGRKLKACPYYTARELIDSAD 360
Query: 261 LVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELE 320
++FCPY+Y+++ IR +M++ +K ++ILDEAHNIE+ AR+ S + E L + EL+
Sbjct: 361 IIFCPYNYLLDSQIRESMDIKLKEQVVILDEAHNIEECARETASYSVTEVQLRFARDELD 420
Query: 321 QVCSVN--PMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRELQEANIS 378
+ + N ++PL ++ +L+ W+E L +R+++ W+G++ L L I+
Sbjct: 421 SLINSNIRKKSHEPLRDVCYNLINWLETNSKNLVERDYESSCKIWSGNEMLLNLHRMGIT 480
Query: 379 RQCFPIL---LECATKAIKEATDTES-----ELPHLSGMSVITLEGLFSSLTYFFSRNGS 430
FP+L L + ++ T T ++P +S + I L+GLF L Y F +N
Sbjct: 481 AASFPVLQKHLSAVLQKEEKVTSTHGKEEAIQIPIISASTQIMLKGLFMVLDYLFRKNSR 540
Query: 431 HVSDYQLALQKYI--------------------KRDSKNPGGNWTHTLSLWCLNPAVVFK 470
DY++A+Q+ K+ S+ G + L+ WCLNPAV F
Sbjct: 541 FADDYKVAIQQTYSWTNQIAIFDKNALLPVPKNKKHSRQKIG--VNVLNFWCLNPAVAFS 598
Query: 471 DVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPL 530
D+ + +I+LTSGTLSP+ SFSSELGV F LEA HVI + QV + +GP L
Sbjct: 599 DINDKVRTIVLTSGTLSPLKSFSSELGVTFNIQLEANHVIS-NSQVWVGTVGSGPKGRNL 657
Query: 531 NASYKTAD----------------------------GYKLMEKLCNRWRETGQWSRLNAK 562
A+++ + YKL+EKL RW TG W L +
Sbjct: 658 CATFQHTETFEFQDEVGMLLLSVCQTVSQGILCFLPSYKLLEKLRERWIFTGLWHSLESV 717
Query: 563 KPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKK 622
K + EP+GG + DF+ +L+ YY++I K +G D
Sbjct: 718 KTVIAEPQGGEKTDFDELLQVYYDAI--------------KFKGEKD------------- 750
Query: 623 GASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSG 667
GA +AVCRGK I +GIPFPN+ D+QV LK++YND + + LL G
Sbjct: 751 GALLIAVCRGKVSEGLDFSDDNARAVITIGIPFPNVKDLQVELKRQYNDHHSKLRGLLPG 810
Query: 668 NEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNR--AHISKWLRKSIKQYDS 725
+WY QA+RALNQA+GRCIRH+ D+GA+IL+D+RF +R + +SKW+R+ I+ + +
Sbjct: 811 RQWYEIQAYRALNQALGRCIRHKNDWGALILVDDRFNNNPDRYISGLSKWVRQQIQHHST 870
Query: 726 FDASLEGLKSF 736
F ++LE L F
Sbjct: 871 FASALESLTEF 881
Score = 73.6 bits (179), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 47/67 (70%), Gaps = 5/67 (7%)
Query: 15 LNAYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCS 74
L+ Y +GG+++ FP + Y +QL M ++ L+ +Q H LLESPTG+GKSL+LLCS
Sbjct: 5 LSEYTIGGVKIHFPCRAYPAQLAMMNSIVRGLNSSQ-----HCLLESPTGSGKSLALLCS 59
Query: 75 TLAWQQN 81
LAWQQ+
Sbjct: 60 ALAWQQS 66
>gi|255078886|ref|XP_002503023.1| predicted protein [Micromonas sp. RCC299]
gi|226518289|gb|ACO64281.1| predicted protein [Micromonas sp. RCC299]
Length = 1566
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 282/846 (33%), Positives = 403/846 (47%), Gaps = 178/846 (21%)
Query: 31 PYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCKLKNQLA- 89
P+ Q V M +V+ D + +ALLESPTG+GKSL+LLCS LAWQ+ K N
Sbjct: 28 PHSHQGV-MGKVLKAADAGE-----NALLESPTGSGKSLALLCSALAWQERWKRDNLGVK 81
Query: 90 -NISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKKMTPTIFY 148
+++ K D E G +P S PP+ + N + K P ++Y
Sbjct: 82 FGVNNVKVDDE---------GWIVPSS---GDPPALEDKENDAGSAN-DKKPPKVPRVYY 128
Query: 149 ASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDK-ENIDEECKLLLG----- 202
A+RTHSQI QV+ E K+TAYR M VL SR HYC + VR + NI++ECK LL
Sbjct: 129 ATRTHSQIQQVVRELKRTAYRPAMVVLGSRDHYCIHPSVRKRGRNINDECKQLLERGVRG 188
Query: 203 ---------------DRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGC 247
D GC K+ G+ S Q E DIEDLV G+ R C
Sbjct: 189 GGGGGDASGAPSSGEDTGRGCGYSHGAMKLAGNVSRQGA---EPLDIEDLVVAGKKSRAC 245
Query: 248 SYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDI 307
Y+AA+ A+ A+LVFCPY+Y+++P +R AM++D+KGAI+ILDEAHN+ED +R+A S DI
Sbjct: 246 PYFAAKHAAEGAELVFCPYNYLLDPAVRSAMDIDVKGAIVILDEAHNVEDTSREAASCDI 305
Query: 308 DEDVLLKLQMELEQVCS-----VNPMIYQPLIEMTQDLVG--------W------IERRK 348
D + L + V S +P T ++G W ++ +
Sbjct: 306 DLERLEEAAAAFAGVASNSGGDGEGRSNEPDTTDTHAVLGGIVANVARWLRGASDLDHPR 365
Query: 349 ATLAKREFQHFFSCWTGDKAL-RELQEANISRQCFPILLECATKAIKEATDTESELP-HL 406
L F+ + + W+G A+ R++++ + E KEA D ++ +
Sbjct: 366 CPLRPHGFERWMAVWSGGSAVARQMRDMGLDPASVAAAEEAKRSVAKEANDAKTPADRRV 425
Query: 407 SGMSVITLEGLFSSLTYFFS--RNG-------SHVSDYQLALQKYIKRDSKNPGGNWTH- 456
SG ++ T E L +S Y R G V DY+L +QK K PG +
Sbjct: 426 SGAALKTAETLLTSARYALHGYRGGPSGGPVAGAVHDYRLVIQKSFK---DAPGSDGERD 482
Query: 457 ---TLSLWCLNPAVVFKDVAELSLS--IILTSGTLSPMNSFSSELGVQFGTCLEAPHVID 511
TLSLW LNPA+ F D+A + ++LTSGTL+P++SF+SELGV F +EAPH +D
Sbjct: 483 VAVTLSLWALNPALAFNDLAGPGGARCVVLTSGTLAPLSSFASELGVSFPIRMEAPHCVD 542
Query: 512 VDLQVLTSVISTGPDNYPLNASYKTA----------------------------DGYKLM 543
V QV + GP L ++KTA Y L+
Sbjct: 543 VHKQVWAGAVGVGPAGAQLCGTFKTAAEFAYQDDLGNALREWCRDIPHGVLVFFPSYSLL 602
Query: 544 EKLCNRWRETGQWSRLN--AKKPLFVEPK------------------------------- 570
+++ RW+ TG W L K +F EP+
Sbjct: 603 DRVTQRWKSTGAWKALEQATGKKMFQEPRGNEQPHHAEAGGRGGGSRGGGRGGRAGSRGG 662
Query: 571 ----GGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASF 626
GGS+ + +L YY ++ + E+ +GA
Sbjct: 663 KTTQGGSENALDAMLARYYRAVRASVA-------------AAPHAHAPAPESHPARGAVL 709
Query: 627 LAVCRGKIVVGI---------------PFPNINDIQVSLKKKYNDTYRSSKNLLSGNEWY 671
LAV RGK+ GI P+PN+ D +V LK+ YN+ S+ LLSG++WY
Sbjct: 710 LAVVRGKVSEGIDFADANARGVVVVGVPYPNVKDKRVELKRLYNNEG-VSRGLLSGDQWY 768
Query: 672 CNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLE 731
QAFRALNQA+GRC+RHR D+GAI+L DER+ + H+ KWLR ++++ F+ S
Sbjct: 769 SQQAFRALNQAVGRCLRHRNDHGAILLADERYLRDDMTRHLPKWLRPAMRKCAGFEDSRR 828
Query: 732 GLKSFF 737
GL+SFF
Sbjct: 829 GLRSFF 834
>gi|348532245|ref|XP_003453617.1| PREDICTED: Fanconi anemia group J protein [Oreochromis niloticus]
Length = 1236
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 242/693 (34%), Positives = 366/693 (52%), Gaps = 112/693 (16%)
Query: 126 GQTAQVAMNNKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYR-VPMAVLASRKHYCTN 184
G T + + +K TP IF+ +RTH QI+Q+ E K+T Y VPM +L+SR H C N
Sbjct: 241 GSTEDAVKDKEKDGRKKTPKIFFGTRTHKQITQITHELKRTVYSGVPMTILSSRDHTCVN 300
Query: 185 KYVRDKENIDEECKLLLGDRN-LGCPQFKNVHKVRGHPSLQK-GGCHEVHDIEDLVNVGQ 242
V N +E CK LL ++ C + V ++R +LQ G DIEDLV +G+
Sbjct: 301 PDVVPHTNRNERCKDLLEAKDGRSCRYYHGVQRMRDQNTLQHVHGLRAAWDIEDLVTLGK 360
Query: 243 VVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDA 302
+R CSY+AAR + A ++FCPY+Y+++P+IR +ME+D++G IL+LDEAHNIED AR++
Sbjct: 361 RLRSCSYFAARELMQSAWIIFCPYNYLLDPMIRESMEIDLEGQILVLDEAHNIEDCARES 420
Query: 303 GSVDIDEDVLLKLQMELEQVCSVNPMIYQPLIEMTQ----DLVGWIERRKATLAKREFQH 358
S +D LL + EL+ + VN I + E+ + L+ WI+ ++ +++R ++
Sbjct: 421 ASYTLDYKSLLMSRDELDSM--VNNNIRRSKHELLRGFCYSLINWIQESQSLMSERGYET 478
Query: 359 FFSCWTGDKALRELQEANISRQCFPILLECATKAIKE--------ATDTESELPHLSGMS 410
W+G + + I+ F IL + +++ + ++P +S +
Sbjct: 479 AGKVWSGKEIVGIFHTLGITADTFNILKQNLAAVLEKEEHAGVVNGREDVVQIPTISPPT 538
Query: 411 VITLEGLFSSLTYFFSRNGSHVSDYQLALQK------YIKRDSKNPGGNWTH-------- 456
L+ LF L + F + DY++ALQK + D N G
Sbjct: 539 ATVLKNLFMVLDFLFRDSCRFADDYRVALQKSYAWTNQVPPDVPNAQGFIVRPRGRRQTV 598
Query: 457 -------TLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHV 509
TLS WCLNPAV F D++ SI+LTSGTLSPM+SFSSELGV+F LEA HV
Sbjct: 599 RVKTEVLTLSFWCLNPAVAFSDLSGSVHSIVLTSGTLSPMDSFSSELGVKFSIQLEANHV 658
Query: 510 IDVDLQVLTSVISTGPDNYPLNASYKTAD----------------------------GYK 541
I+ QV + GP L A+++ A+ YK
Sbjct: 659 INKS-QVWVGTVGAGPQGRKLCATFQNAETYAFQDEVGGLLLHVCQVMAKGVLCFLPSYK 717
Query: 542 LMEKLCNRWRETGQWSRLNAKKPLFVEPK-GGSQEDFEIVLKHYYNSISQGSKCAVVRKK 600
+++KL +RW +TG W +L +K + EP+ GG + DF+ +L YY++I +
Sbjct: 718 MLDKLRDRWTKTGLWDKLEQQKTVITEPRGGGGKGDFDELLHTYYSAIKYCEE------- 770
Query: 601 RVKREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNIND 645
K GA +AVCRGK + VGIPFPNI D
Sbjct: 771 --------------------KDGALLIAVCRGKVSEGLDFTDDNARAVVAVGIPFPNIKD 810
Query: 646 IQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQE 705
+QV LK KYND + S+ LL G+ WY QA+RALNQA+GRCIRHR D+GA++L+D+R++
Sbjct: 811 LQVELKMKYNDLHSKSRGLLPGSRWYEIQAYRALNQALGRCIRHRNDWGALVLVDDRYRN 870
Query: 706 ERNR--AHISKWLRKSIKQYDSFDASLEGLKSF 736
N+ +SKW+R+ ++ + +F +++ L +F
Sbjct: 871 NPNKYITGLSKWVRQLVQHHSTFSDAMQSLVAF 903
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 41/63 (65%), Gaps = 5/63 (7%)
Query: 18 YHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLA 77
Y +GG+++ FP + Y SQL M ++ L+ Q + LLESPTG+GKSL+LLCS L
Sbjct: 8 YTIGGVKIHFPCKAYPSQLAMMNLIVRGLNTGQ-----YCLLESPTGSGKSLALLCSALG 62
Query: 78 WQQ 80
WQ
Sbjct: 63 WQH 65
>gi|149053741|gb|EDM05558.1| BRCA1 interacting protein C-terminal helicase 1 (predicted) [Rattus
norvegicus]
Length = 964
Score = 411 bits (1057), Expect = e-111, Method: Compositional matrix adjust.
Identities = 236/671 (35%), Positives = 361/671 (53%), Gaps = 108/671 (16%)
Query: 144 PTIFYASRTHSQISQVISEYKKTAYR-VPMAVLASRKHYCTNKYVRDKENIDEEC-KLLL 201
P I++ +RTH QI+Q+ E +KTAY VPM +L+SR H C + V N +E+C +LL
Sbjct: 241 PKIYFGTRTHKQIAQITRELRKTAYSGVPMTILSSRDHTCVHPEVVGNFNRNEKCMELLD 300
Query: 202 GDRNLGCPQFKNVHKVRGHPSLQ-KGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQ 260
G C + VH++ +LQ G + DIE+LV++G+ ++ C YY AR + D A
Sbjct: 301 GKHGKSCYFYHGVHRISNQQTLQFLHGISKAWDIEELVSLGRKLKACPYYTARELIDSAD 360
Query: 261 LVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELE 320
++FCPY+Y+++ IR +M++ +K ++ILDEAHNIE+ AR+ S + E L + EL+
Sbjct: 361 IIFCPYNYLLDSQIRESMDIKLKEQVVILDEAHNIEECARETASYSVTEVQLRFARDELD 420
Query: 321 QVCSVN--PMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRELQEANIS 378
+ + N ++PL ++ +L+ W+E L +R+++ W+G++ L L I+
Sbjct: 421 SLINSNIRKKSHEPLRDVCYNLINWLETNSKNLVERDYESSCKIWSGNEMLLNLHRMGIT 480
Query: 379 RQCFPIL---LECATKAIKEATDTES-----ELPHLSGMSVITLEGLFSSLTYFFSRNGS 430
FP+L L + ++ T T ++P +S + I L+GLF L Y F +N
Sbjct: 481 AASFPVLQKHLSAVLQKEEKVTSTHGKEEAIQIPIISASTQIMLKGLFMVLDYLFRKNSR 540
Query: 431 HVSDYQLALQKYI--------------------KRDSKNPGGNWTHTLSLWCLNPAVVFK 470
DY++A+Q+ K+ S+ G + L+ WCLNPAV F
Sbjct: 541 FADDYKVAIQQTYSWTNQIAIFDKNALLPVPKNKKHSRQKIG--VNVLNFWCLNPAVAFS 598
Query: 471 DVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPL 530
D+ + +I+LTSGTLSP+ SFSSELGV F LEA HVI + QV + +GP L
Sbjct: 599 DINDKVRTIVLTSGTLSPLKSFSSELGVTFNIQLEANHVIS-NSQVWVGTVGSGPKGRNL 657
Query: 531 NASYKTAD----------------------------GYKLMEKLCNRWRETGQWSRLNAK 562
A+++ + YKL+EKL RW TG W L +
Sbjct: 658 CATFQHTETFEFQDEVGMLLLSVCQTVSQGILCFLPSYKLLEKLRERWIFTGLWHSLESV 717
Query: 563 KPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKK 622
K + EP+GG + DF+ +L+ YY++I K +G D
Sbjct: 718 KTVIAEPQGGEKTDFDELLQVYYDAI--------------KFKGEKD------------- 750
Query: 623 GASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSG 667
GA +AVCRGK I +GIPFPN+ D+QV LK++YND + + LL G
Sbjct: 751 GALLIAVCRGKVSEGLDFSDDNARAVITIGIPFPNVKDLQVELKRQYNDHHSKLRGLLPG 810
Query: 668 NEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNR--AHISKWLRKSIKQYDS 725
+WY QA+RALNQA+GRCIRH+ D+GA+IL+D+RF +R + +SKW+R+ I+ + +
Sbjct: 811 RQWYEIQAYRALNQALGRCIRHKNDWGALILVDDRFNNNPDRYISGLSKWVRQQIQHHST 870
Query: 726 FDASLEGLKSF 736
F ++LE L F
Sbjct: 871 FASALESLTEF 881
Score = 73.2 bits (178), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 47/67 (70%), Gaps = 5/67 (7%)
Query: 15 LNAYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCS 74
L+ Y +GG+++ FP + Y +QL M ++ L+ +Q H LLESPTG+GKSL+LLCS
Sbjct: 5 LSEYTIGGVKIHFPCRAYPAQLAMMNSIVRGLNSSQ-----HCLLESPTGSGKSLALLCS 59
Query: 75 TLAWQQN 81
LAWQQ+
Sbjct: 60 ALAWQQS 66
>gi|354497402|ref|XP_003510809.1| PREDICTED: Fanconi anemia group J protein homolog [Cricetulus
griseus]
gi|344242804|gb|EGV98907.1| Fanconi anemia group J protein-like [Cricetulus griseus]
Length = 1166
Score = 410 bits (1055), Expect = e-111, Method: Compositional matrix adjust.
Identities = 232/670 (34%), Positives = 360/670 (53%), Gaps = 105/670 (15%)
Query: 144 PTIFYASRTHSQISQVISEYKKTAYR-VPMAVLASRKHYCTNKYVRDKENIDEECKLLLG 202
P I++ +RTH QI+Q+ E +KTAY VPM +L+SR H C + V N +E+C LL
Sbjct: 242 PKIYFGTRTHKQIAQITRELQKTAYSGVPMTILSSRDHTCVHPEVMGNFNRNEKCMELLD 301
Query: 203 -DRNLGCPQFKNVHKVRGHPSLQK-GGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQ 260
+ C + VH++ +LQ G + DIE+LV++G+ ++ C YY AR + D+A
Sbjct: 302 VKQGKSCYFYHGVHRINNQHTLQSFPGMSKAWDIEELVSLGRKLKACPYYTARELIDEAD 361
Query: 261 LVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELE 320
++FCPY+Y+++ IR +M++ +K ++ILDEAHNIE+ AR++ S + E L + EL+
Sbjct: 362 IIFCPYNYLLDAQIRESMDIKLKDQVVILDEAHNIEECARESASYSVTEVQLRFARDELD 421
Query: 321 QVC--SVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRELQEANIS 378
+ +V ++PL ++ +L+ W+E L +R+++ W+G++ L L I+
Sbjct: 422 SLINSNVRKKNHEPLRDVCYNLINWLETNSEHLVERDYESSCKIWSGNEMLLSLYRMGIT 481
Query: 379 RQCFPILLECATKAIKE-----ATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVS 433
FP+L + +++ + ++P +S + I L+GLF L Y F N
Sbjct: 482 NATFPVLQRHFSAVLQKEEKAYGKEEAIQIPIISASTQIMLKGLFMVLDYLFRENSRFAD 541
Query: 434 DYQLALQKYI--------------------KRDSKNPGGNWTHTLSLWCLNPAVVFKDVA 473
DY++A+Q+ K+ S+ G + L+ WCLNPAV F D+
Sbjct: 542 DYKIAIQQTYSWTNQIAIFDKSGVLAVPKNKKHSRQKIG--VNVLNFWCLNPAVAFSDIN 599
Query: 474 ELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNAS 533
+ +I+LTSGTLSP+ SFSSELGV F LEA HV+ + QV + +GP L A+
Sbjct: 600 DKVRTIVLTSGTLSPLKSFSSELGVTFNIQLEANHVVS-NSQVWVGTVGSGPQGRNLCAT 658
Query: 534 YKTAD----------------------------GYKLMEKLCNRWRETGQWSRLNAKKPL 565
++ + YKL+EKL RW TG W L + K +
Sbjct: 659 FQHTETFEFQDEVGMLLLSVCQTVSQGILCFLPSYKLLEKLRERWVSTGLWHSLESVKTV 718
Query: 566 FVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGAS 625
EP+ G + DF+ +L+ YY++I K +G D GA
Sbjct: 719 IAEPQRGEKTDFDELLQVYYDAI--------------KFKGEKD-------------GAL 751
Query: 626 FLAVCRGK---------------IVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSGNEW 670
+AVCRGK + VGIPFPN+ D+QV LK++YND + + LL G +W
Sbjct: 752 LIAVCRGKVSEGLDFSDDNARAVVTVGIPFPNVKDLQVELKRQYNDHHSKLRGLLPGRQW 811
Query: 671 YCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNR--AHISKWLRKSIKQYDSFDA 728
Y QA+RALNQA+GRCIRH+ D+GA+IL+D+RF NR + +SKW+R+ I+ + +F +
Sbjct: 812 YEIQAYRALNQALGRCIRHKNDWGALILVDDRFNSNPNRYISGLSKWVRQQIQHHSTFAS 871
Query: 729 SLEGLKSFFR 738
+LE L F R
Sbjct: 872 ALESLTEFSR 881
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 45/64 (70%), Gaps = 5/64 (7%)
Query: 18 YHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLA 77
Y +GG+++ FP + Y +QL M ++ L+ +Q H LLESPTG+GKSL+LLCS LA
Sbjct: 8 YTIGGVKINFPCKAYPAQLAMMNSIVRGLNSSQ-----HCLLESPTGSGKSLALLCSALA 62
Query: 78 WQQN 81
WQQ+
Sbjct: 63 WQQS 66
>gi|410980592|ref|XP_003996661.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group J protein
[Felis catus]
Length = 1230
Score = 407 bits (1047), Expect = e-110, Method: Compositional matrix adjust.
Identities = 244/722 (33%), Positives = 372/722 (51%), Gaps = 112/722 (15%)
Query: 98 TEAVTDPLANGGGFIPESQPSTI------PPSTNGQTAQVAMNNKNVKKKMTPTIFYASR 151
T + PL F P++ P N Q + K P I++ +R
Sbjct: 192 TTKLNSPLGKINSFSPQNPPGHCSRCCCSTKQGNSQGYSNTTKKDHGGKSKIPKIYFGTR 251
Query: 152 THSQISQVISEYKKTAYR-VPMAVLASRKHYCTNKYVRDKENIDEEC-KLLLGDRNLGCP 209
TH QI+Q+ E ++TAY VPM +L+SR H C + V N +E+C +LL G C
Sbjct: 252 THKQIAQITRELRRTAYSGVPMTILSSRDHTCVHPEVVGNFNRNEKCMELLDGKNGKSCY 311
Query: 210 QFKNVHKVRGHPSLQ--KGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYS 267
+ VHK+ +LQ +G C + DIE+LV++G+ ++ C YY AR + +DA +VFCPY+
Sbjct: 312 FYHGVHKISDQHTLQTLEGMC-KAWDIEELVSLGKKLKACPYYTARELIEDAHIVFCPYN 370
Query: 268 YIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQVC--SV 325
Y+++ IR +M++++K I+ILDEAHNIED AR++ S + E L + EL+ + ++
Sbjct: 371 YLLDAQIRESMDINLKEQIVILDEAHNIEDCARESASYSVTEVQLWFARDELDTMVNNNI 430
Query: 326 NPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRELQEANISRQCFPIL 385
++PL + L+ W+E L +R+++ W+G + L L + I+ FPIL
Sbjct: 431 RKKDHEPLRAVCYSLINWLEANSEHLVERDYESSCKIWSGREMLLNLHKMGITTATFPIL 490
Query: 386 -------LECATKAIK-EATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQL 437
L+ K + + E+P +S + I L+GLF Y F +N DY++
Sbjct: 491 QGHFSSVLQKEEKVLPIHGREETREVPVISASTQIILKGLFMVFDYLFRQNSKFADDYKV 550
Query: 438 ALQK---YIKRDSKNPGGNW---------------THTLSLWCLNPAVVFKDVAELSLSI 479
A+Q+ +I + + + L+ WCLNPAV F D+ +I
Sbjct: 551 AIQQTYSWINQTDSSDKNEFFAQAKSRKRVRQKTAVRVLNFWCLNPAVAFSDINGKVWTI 610
Query: 480 ILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTAD- 538
++TSGTLSPM SFSSELGV F LEA HVI+ + QV I +GP L A+++ +
Sbjct: 611 VVTSGTLSPMKSFSSELGVTFSIQLEANHVIN-NSQVWVGTIGSGPKGRNLCATFQHTET 669
Query: 539 ---------------------------GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKG 571
YKL+EKL RW TG W L K + VEP
Sbjct: 670 FEFQDEVGALVLSVCQTVSQGILCFLPSYKLLEKLKERWLSTGLWHNLELVKTVIVEPPA 729
Query: 572 GSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCR 631
G + DF+ +L+ YY++I K +G D GA +AVCR
Sbjct: 730 GEKIDFDELLQMYYDAI--------------KYKGEKD-------------GALLVAVCR 762
Query: 632 GK---------------IVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAF 676
GK I +GIPFPN+ D+QV LK++YND + + LL G +WY QA+
Sbjct: 763 GKVSEGLDFSDDNARAVITIGIPFPNVKDLQVVLKRQYNDQHSKLRGLLPGRQWYEIQAY 822
Query: 677 RALNQAIGRCIRHRFDYGAIILLDERFQEERNR--AHISKWLRKSIKQYDSFDASLEGLK 734
RALNQA+GRCIRH+ D+GA+IL+D+RF + + +SKW+R+ ++ + +F++++E L
Sbjct: 823 RALNQALGRCIRHKNDWGALILVDDRFSSNPAQYISGLSKWIRQQVQYHSTFESAMESLA 882
Query: 735 SF 736
F
Sbjct: 883 EF 884
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 45/64 (70%), Gaps = 5/64 (7%)
Query: 18 YHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLA 77
Y +GG+++ FPY+ Y SQL M ++ L+ Q H LLESPTG+GKS++LLCS LA
Sbjct: 8 YTIGGVKITFPYKAYPSQLAMMNSIVRGLNSKQ-----HCLLESPTGSGKSVALLCSALA 62
Query: 78 WQQN 81
WQQ+
Sbjct: 63 WQQS 66
>gi|301608630|ref|XP_002933884.1| PREDICTED: Fanconi anemia group J protein-like [Xenopus (Silurana)
tropicalis]
Length = 1229
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 240/682 (35%), Positives = 367/682 (53%), Gaps = 111/682 (16%)
Query: 136 KNVKKKMTPTIFYASRTHSQISQVISEYKKTAYR-VPMAVLASRKHYCTNKYVRDKENID 194
+N +K P IF+ +RTH QI+Q+ E ++TAY V M +L+SR+H C + + N
Sbjct: 243 ENGEKPKVPKIFFGTRTHKQIAQITRELRRTAYSSVRMTILSSREHTCVHPDIHSNRN-- 300
Query: 195 EECKLLLGDRN-LGCPQFKNVHKVRGHPSLQ-KGGCHEVHDIEDLVNVGQVVRGCSYYAA 252
E+CK LL ++ C + V K+ L+ + G + DIE+LV +G+ +R C Y+AA
Sbjct: 301 EKCKELLEAKDGHSCRFYHGVQKMNEQNLLKYRHGVDKAWDIEELVGLGKRLRACPYFAA 360
Query: 253 RSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVL 312
R + +A +VFCPY+Y+++ IR +M++ ++G ++ILDEAHNIED AR++ S ++ L
Sbjct: 361 RELMQEADIVFCPYNYLLDSQIRESMDIFLEGQVVILDEAHNIEDCARESASFSCSDEQL 420
Query: 313 LKLQMELEQVCSVNPMI----YQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKA 368
+ + E++ + VN I ++PL + L WI L +RE++ W G +
Sbjct: 421 MYARDEIDSM--VNHGIRVSDHEPLRAVCYSLTNWIRECSDQLVEREYEASCKVWNGKEI 478
Query: 369 LRELQEANISRQCFPILLECATKAIKEATDTES---------ELPHLSGMSVITLEGLFS 419
L + I+ FP LL+ A+ E + + ++P LS + + L+GLF
Sbjct: 479 LAIFHDMGITNATFP-LLKANLAAVVEKEEKITMLHGQENVIKIPTLSPQTQMVLKGLFL 537
Query: 420 SLTYFFSRNGSHVSDYQLALQKYI----KRDSKNPGGNW--------------THTLSLW 461
L Y F +N DY++ALQ+ ++D + G + +TL+ W
Sbjct: 538 VLDYLFRQNNRFAEDYRIALQQSYTWANRQDIPDENGFFARPRNRRAVRQKIMVYTLNFW 597
Query: 462 CLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVI 521
CLNPAV F D++ + +I+LTSGTLSPM SFSSELGV+F LEA HVI QV +
Sbjct: 598 CLNPAVAFSDLSSNARTIVLTSGTLSPMGSFSSELGVKFSIQLEANHVIHKS-QVWVGTV 656
Query: 522 STGPDNYPLNASYKTAD----------------------------GYKLMEKLCNRWRET 553
GP L A+++ + YK++EKL +RW T
Sbjct: 657 GAGPKGRKLCATFQHTETFDFQDEIGALLLSVCQTVSHGVLCFLPSYKMLEKLKDRWMHT 716
Query: 554 GQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTI 613
G W L K + EP+GG + DF+ +L+ YY++I R K E
Sbjct: 717 GLWENLERIKTVIKEPQGGDKTDFDKMLQMYYDAI------------RYKGE-------- 756
Query: 614 ESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKKYNDTY 658
K GA +AVCRGK + VGIPFPNI D+QV LK+KYND +
Sbjct: 757 -------KDGALLIAVCRGKVSEGLDFSDNNARAVVTVGIPFPNIKDLQVELKRKYNDQH 809
Query: 659 RSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEE-RNRAHISKWLR 717
S+ LL G++WY QA+RALNQA+GRCIRH+ D+GA+IL+D+RF+ + +SKW+R
Sbjct: 810 AKSRGLLPGSQWYEIQAYRALNQALGRCIRHKNDWGALILVDDRFRSNPKYITGLSKWVR 869
Query: 718 KSIKQYDSFDASLEGLKSFFRD 739
+ ++ + +F+ +LE L F ++
Sbjct: 870 QLVQHHSTFNGALESLNEFSKN 891
Score = 71.2 bits (173), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 45/66 (68%), Gaps = 5/66 (7%)
Query: 15 LNAYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCS 74
L+ Y +GG+++ FP + Y SQL M ++ L+ Q H LLESPTG+GKSL+LLCS
Sbjct: 5 LSEYTIGGVKILFPCRAYPSQLAMMNSIMRGLNCKQ-----HCLLESPTGSGKSLALLCS 59
Query: 75 TLAWQQ 80
LAWQQ
Sbjct: 60 ALAWQQ 65
>gi|338711555|ref|XP_001917874.2| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group J
protein-like, partial [Equus caballus]
Length = 1219
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 232/671 (34%), Positives = 348/671 (51%), Gaps = 100/671 (14%)
Query: 125 NGQTAQVAMNNKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYR-VPMAVLASRKHYCT 183
N Q + + K P I++ +RTH QI+Q+ E ++TAY VPM +L+SR H C
Sbjct: 224 NSQDSSNTIKKDQGGKSRIPKIYFGTRTHKQIAQITRELRRTAYSGVPMTILSSRDHTCV 283
Query: 184 NKYVRDKENIDEEC-KLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQ 242
+ V N +E+C +LL G C + +HK+ LQ G + DIE+LV +G+
Sbjct: 284 HPDVVGNFNRNEKCMELLDGKNGKSCYFYHGIHKISDQHKLQTEGISKAWDIEELVTLGK 343
Query: 243 VVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDA 302
++ C YY AR + +DA +VFCPY+Y+++ IR +M++++K I+ILDEAHNI D AR++
Sbjct: 344 KLKACPYYTARELIEDADIVFCPYNYLLDAQIRESMDINLKEQIVILDEAHNIVDCARES 403
Query: 303 GSVDIDEDVLLKLQMELEQVC--SVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFF 360
S I E L + EL+ + ++ ++PL + L+ W+E L +R+++
Sbjct: 404 ASYSITEVRLRFARDELDSMVNNNIRKKDHEPLRAVCYSLINWLEANSEHLVERDYESSC 463
Query: 361 SCWTGDKALRELQEANISRQCFPIL-------LECATKAIKEATDTESELPHLSGMSVIT 413
W+G + L L + I+ FPIL L+ K + E+P +S + I
Sbjct: 464 KIWSGSEMLLNLHKMGITTATFPILQGHFSAVLQKEEKVLPIHGKESREVPIISASTQIM 523
Query: 414 LEGLFSSLTYFFSRNGSHVSDYQLALQK-YIKRDSKNPGG-----------------NWT 455
L+GLF L Y F +N DY++A+Q+ Y + +P
Sbjct: 524 LKGLFMVLDYLFRQNSRFADDYKVAIQQTYSWVNQTDPSDKNEFFALPKNKKRLRQKTAV 583
Query: 456 HTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQ 515
H L+ WCLNPAV F D+ +I+LTSGTLSPM SFSSELGV F +EA HVI+ + Q
Sbjct: 584 HVLNFWCLNPAVAFSDINGKVWTIVLTSGTLSPMKSFSSELGVTFTIQMEANHVIN-NSQ 642
Query: 516 VLTSVISTGPDNYPLNASYKTAD----------------------------GYKLMEKLC 547
V I +GP L A+++ + YKL+EKL
Sbjct: 643 VWVGTIGSGPKGRNLCATFQRTETFEFQDEVGALLLSVCQTVSQGILCFLPSYKLLEKLK 702
Query: 548 NRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGN 607
RW TG W L K + VEP+GG + DFE +L+ YY++ VK +G
Sbjct: 703 ERWLYTGLWHNLELVKTVIVEPQGGEKTDFEELLQVYYDA--------------VKYKGE 748
Query: 608 NDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSG 667
N ++ NI IQV LK++YND + + LL G
Sbjct: 749 KVKNKLQG--------------------------NIVRIQVELKRRYNDQHSKLRGLLPG 782
Query: 668 NEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNR--AHISKWLRKSIKQYDS 725
+WY QA+RALNQA+GRCIRH+ D+GA+IL+D+RF+ NR + +SKW+R+ I+ + +
Sbjct: 783 RQWYEIQAYRALNQALGRCIRHKNDWGALILVDDRFRSNPNRYISGLSKWVRQQIQHHST 842
Query: 726 FDASLEGLKSF 736
F+++LE L F
Sbjct: 843 FESALESLAEF 853
Score = 76.3 bits (186), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 45/64 (70%), Gaps = 5/64 (7%)
Query: 18 YHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLA 77
Y +GG+++ FPY+ Y SQL M ++ L+ Q H LLESPTG+GKSL+LLCS LA
Sbjct: 7 YTIGGVKINFPYKAYPSQLAMMNSIVRGLNSKQ-----HCLLESPTGSGKSLALLCSALA 61
Query: 78 WQQN 81
WQQ+
Sbjct: 62 WQQS 65
>gi|196012030|ref|XP_002115878.1| hypothetical protein TRIADDRAFT_30066 [Trichoplax adhaerens]
gi|190581654|gb|EDV21730.1| hypothetical protein TRIADDRAFT_30066 [Trichoplax adhaerens]
Length = 995
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 231/680 (33%), Positives = 357/680 (52%), Gaps = 108/680 (15%)
Query: 135 NKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYR-VPMAVLASRKHYCTNKYVRDKENI 193
N V + P IF+ +RTH QI+Q+I E KKTAYR V M +L+SR C + + +
Sbjct: 240 NVLVLLRSVPKIFFGTRTHKQIAQIIRELKKTAYRNVKMTILSSRDFTCIHPKISKSSSK 299
Query: 194 DEECKLLLGDRNLG-CPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAA 252
+++C+L + +G C NV +++ H +L+ G + DIE+ V V + C YYAA
Sbjct: 300 NDDCRLAI---EVGSCVYHHNVPRLKSHQALEARGINSAWDIEEFVQVCNKSKACPYYAA 356
Query: 253 RSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVL 312
R + D ++++FCPY+Y+I IR M++ ++ I+ILDEAHNIED AR+A S +I L
Sbjct: 357 RGLIDQSEIIFCPYNYLIESSIRDLMDITLRNQIVILDEAHNIEDSAREATSFEITALTL 416
Query: 313 LKLQMELEQVCSVNPMI--YQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALR 370
++ +L + + + + P+ M L WI +L F+ W+ + L
Sbjct: 417 KEMIDDLNFLIERDILTGHHGPIHAMCHKLWLWINDESHSLKNTGFEQASKVWSAIEILA 476
Query: 371 ELQEANISRQCFPILLECATKAIKEATDTESELPHL----------SGMSVITLEGLFSS 420
+ +IS + +P + + K T +P L SG +++ L+G+
Sbjct: 477 IFERMDISVETYPTIQ--VYRYNKGLNLTVMHIPILRIETGVVLAASGKTLLYLKGMMLV 534
Query: 421 LTYFFSRNGSHVSDYQLALQ----------------KYIKRDSKNP----GGNWTHTLSL 460
Y + + +DY+L LQ +K P WT++L+
Sbjct: 535 FGYLLRTDKKYCTDYKLMLQIIQSLIFGYMIIFYRITLVKSVVNIPVEATRKQWTYSLNF 594
Query: 461 WCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSV 520
WC+NPAV F D+ + S+ILTSGTLSPMNSFSSELG+ F LEA H+I+ Q L +
Sbjct: 595 WCMNPAVAFDDIGPAAHSVILTSGTLSPMNSFSSELGLAFSIRLEAAHIINYS-QALVAT 653
Query: 521 ISTGPDNYPLNASYKTAD----------------------------GYKLMEKLCNRWRE 552
+S G + LNASY++A+ Y L++K+ RW+
Sbjct: 654 LSEGINGVSLNASYRSAETFAFQDELGNIILEACRIIPGGILCFFPSYNLLDKVVKRWQN 713
Query: 553 TGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNT 612
T W+ LNA K + EP+GG++ DF+ +L+ +Y+S++ LN
Sbjct: 714 TDTWNSLNAVKIVIAEPRGGNKSDFDDLLQKFYDSVTA-------------------LNM 754
Query: 613 IESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKKYNDT 657
+ + G FLAVCRGK I VGIP+PNI D+++ LKKKYND
Sbjct: 755 M-----SGPSGGLFLAVCRGKVSEGLDFADDNARAVITVGIPYPNIKDLKIELKKKYNDK 809
Query: 658 YRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERF-QEERNRAHISKWL 716
+ + +NLL+G EWY QA+RALNQA+GRCIR+R D+GA++LLD+RF + + A ++KW+
Sbjct: 810 FSAQRNLLTGKEWYEIQAYRALNQALGRCIRNRNDWGALLLLDDRFGKSTKYTAGLAKWV 869
Query: 717 RKSIKQYDSFDASLEGLKSF 736
R+ ++ + +L L SF
Sbjct: 870 RQRVQHFSLASDTLATLSSF 889
Score = 76.6 bits (187), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 47/65 (72%), Gaps = 5/65 (7%)
Query: 17 AYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+Y + G+QVEFPY+ Y SQL M ++I L Q+ HC LLESPTG+GKSL+LLCS L
Sbjct: 19 SYTISGVQVEFPYKAYPSQLSMMSKIIQGL---QQRKHC--LLESPTGSGKSLALLCSAL 73
Query: 77 AWQQN 81
AWQ +
Sbjct: 74 AWQAH 78
>gi|159472757|ref|XP_001694511.1| ATP-dependent DNA helicase [Chlamydomonas reinhardtii]
gi|158276735|gb|EDP02506.1| ATP-dependent DNA helicase [Chlamydomonas reinhardtii]
Length = 897
Score = 381 bits (979), Expect = e-102, Method: Compositional matrix adjust.
Identities = 251/759 (33%), Positives = 377/759 (49%), Gaps = 137/759 (18%)
Query: 18 YHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLA 77
Y + G +V FP+QPYG QL FM +++ TLD +ALLE+PTG GK+LSLLC+ LA
Sbjct: 4 YSIRGHEVHFPHQPYGVQLSFMEKMLRTLDE-----QGNALLEAPTGCGKTLSLLCAALA 58
Query: 78 WQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKN 137
WQ K + Q + + E G + + S + + +
Sbjct: 59 WQAKRKRELQERAAARLRRQVEGGGSGDGPGPSTHSAAPEAAAGGSGGSRGRERRSHRDK 118
Query: 138 VKKKMTPTIFYASRTHS-QISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE 196
K + + S QI+QV+ E K+TAY+ MA+LA+++HYC NK V +DEE
Sbjct: 119 AGGKAPGKGAHGNADDSIQIAQVVRELKRTAYKPSMAILAAKQHYCINKAVLRTGRVDEE 178
Query: 197 CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMA 256
C+ L + C +F+N K G ++ +VHDIE+L + + C Y+ AR +A
Sbjct: 179 CERLAREEAFPC-RFRN--KGGGKQPMRVAVAAQVHDIEELSSACAKAKTCPYFTARDLA 235
Query: 257 DDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQ 316
A+LVFCPYSY+++PV+R A+ +D+ ++LI DEAHN+ED+ R+ GS+D+D D L +++
Sbjct: 236 LTAELVFCPYSYLLDPVVRAALGLDVGSSVLIFDEAHNMEDVCREGGSMDLDLDALREVE 295
Query: 317 MELEQVCSVN--PMIYQPLIEMTQDLVGWIER---RKATLAKREFQHFFSCWTGDKALRE 371
L ++ P IY+PL E LV W+ R R +A F+ + W G +AL
Sbjct: 296 AALRLAAALTGRPEIYEPLAEGCNRLVLWLARYEERPDGMAASGFEEHEAVWQGPRALTA 355
Query: 372 LQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSH 431
L E +S L +A ++A E + + T EG ++ +R+ S
Sbjct: 356 LDEMGLSSHMVAELW----RAYEQAKAFEEK-------ATFTTEGDAANEAVPANRDNS- 403
Query: 432 VSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNS 491
DY++ ++++I +K+ SGTL+P++S
Sbjct: 404 -GDYRVVVKRWIAHGAKD-----------------------------RRKASGTLAPLDS 433
Query: 492 FSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTA-------------- 537
F+SELG +F LEAPHV+D+ QV V+ GP L++++K A
Sbjct: 434 FASELGTEFHVRLEAPHVVDMGRQVWAGVVPRGPGGGVLSSTFKEAATFRFQDEAGEAVL 493
Query: 538 -------DG-------YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKH 583
DG Y L++KL RW+ TG WSRL K L E + + FE +
Sbjct: 494 RYCQVIPDGVLMFVPSYGLLDKLVTRWKATGLWSRLEGCKTLVTEGREAGK-GFEDAMSR 552
Query: 584 YYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGK---------- 633
YY ++ G +G F+A+CRGK
Sbjct: 553 YYAAVRSG------------------------------RGGLFMAICRGKASEGIDFADQ 582
Query: 634 -----IVVGIPFPNINDIQVSLKKKYNDTYRS-------SKNLLSGNEWYCNQAFRALNQ 681
I++GIPFP + D +V LKK+YND S+ LLSG+ WY QAFRALNQ
Sbjct: 583 HARGVILLGIPFPAVKDTKVRLKKEYNDAGSGPTSGRPPSQRLLSGDAWYSQQAFRALNQ 642
Query: 682 AIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSI 720
A+GRCIRH++D+GAIILLDERF+ + +S+W+R ++
Sbjct: 643 AVGRCIRHKYDWGAIILLDERFRGPGRQQQLSRWVRAAV 681
>gi|390345521|ref|XP_781875.3| PREDICTED: Fanconi anemia group J protein-like [Strongylocentrotus
purpuratus]
Length = 1704
Score = 381 bits (978), Expect = e-102, Method: Compositional matrix adjust.
Identities = 230/635 (36%), Positives = 339/635 (53%), Gaps = 96/635 (15%)
Query: 136 KNVKKK------MTPTIFYASRTHSQISQVISEYKKTAYR-VPMAVLASRKHYCTNKYVR 188
KNVK+ P I++ +RTH QI+Q+I E +TAY+ V M++L SR+H C + V
Sbjct: 302 KNVKRDGDAKPIKVPRIYFGTRTHKQIAQIIRELGRTAYKSVRMSILGSREHTCVHPEVS 361
Query: 189 DKENIDEECKLLLGDRNLG-CPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGC 247
+N +E CK LL D+ G C F NVHK++ ++ G E DIEDLV +G+ V+ C
Sbjct: 362 RSKNKNEGCKDLLDDKTGGTCKFFTNVHKMKQQWQIRDYGLTEAWDIEDLVALGKRVKAC 421
Query: 248 SYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDI 307
Y+++RS+ D A ++FCPY+Y+I+P+IR +ME+D+K ++ILDEAHNIED AR+A S+ +
Sbjct: 422 PYFSSRSLKDQADVIFCPYNYLIDPMIRQSMEIDLKDQVVILDEAHNIEDSAREAASLTV 481
Query: 308 DEDVLLKLQMELEQVCSVNPMIYQPLI--EMTQDLVGWIERRKATLAKREFQHFFSCWTG 365
+ L EL+++ + + ++ L+ WI +TL + +F W+G
Sbjct: 482 TSEQLKDATDELDKLLTFKFREEHTRVIHSVSSSLLRWINDYSSTLRQNDFDRASRMWSG 541
Query: 366 DKALRELQEANISRQCFPILLECATKAIKEATDTES--EL-PHLSGMSVITLEGLFSSLT 422
+ + L IS P L+ A+ E D E+ P L ++ GLF
Sbjct: 542 QEMVAALANMGISPATLPT-LQHHLSALMEDEDERGIKEMGPTLGVLTGALFNGLFVIFN 600
Query: 423 YFFSRNGSHVSDYQLALQK-------------YIKRDSKNPGGNWTHTLSLWCLNPAVVF 469
+ F + DY++AL K +I+R ++ +T +L+ WCLNPAV F
Sbjct: 601 FMFKDDMKFTKDYKVALLKTKARNQFPNTNNTWIQRRRRSAEAVFTLSLNFWCLNPAVAF 660
Query: 470 KDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYP 529
D E +IILTSGTLSPM+SF+SELGV F LEA HVI+ QV S + GP+ +
Sbjct: 661 TDFGEAVRTIILTSGTLSPMSSFASELGVSFPIQLEANHVINKS-QVWVSTWAFGPNGHS 719
Query: 530 LNASYKTAD----------------------------GYKLMEKLCNRWRETGQWSRLNA 561
LNA+Y+ A+ Y +M K+ RW+ TG + +L +
Sbjct: 720 LNATYRNAETFAFQDDLGRVVLEVCRVIPYGVLCFVSSYSMMNKVIERWKTTGLYDQLQS 779
Query: 562 KKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANK 621
K + E +GG + F+ LK +Y++I +V E N L EN
Sbjct: 780 LKQVMCEARGGDKSVFDEQLKEFYDTI------------KVCEE--NGL------ENYPI 819
Query: 622 KGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLS 666
G AVCRGK I VGIP+PN+ D QV K+ YND + +S+ LL+
Sbjct: 820 TGVLMFAVCRGKISEGMDFADNNARAVITVGIPYPNVRDAQVEAKRHYNDQHSASRGLLT 879
Query: 667 GNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDE 701
G+EWY QA+RALNQA+GRCIRH+ +++LDE
Sbjct: 880 GSEWYEVQAYRALNQALGRCIRHK-----VLMLDE 909
Score = 114 bits (285), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 51/103 (49%), Positives = 71/103 (68%), Gaps = 2/103 (1%)
Query: 636 VGIPFPNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGA 695
VGIP+PN+ D QV K+ YND + +++ LL+G+EWY QA+RALNQA+GRCIRH+ D+GA
Sbjct: 910 VGIPYPNVRDAQVEAKRHYNDQHAAARGLLTGSEWYEVQAYRALNQALGRCIRHKKDWGA 969
Query: 696 IILLDERFQEERNR--AHISKWLRKSIKQYDSFDASLEGLKSF 736
I+L+DERF N+ + ISKW+R + +L L F
Sbjct: 970 ILLVDERFSRNPNKYCSGISKWVRGKVIHNTHARDALTSLSEF 1012
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 47/72 (65%), Gaps = 5/72 (6%)
Query: 18 YHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLA 77
Y + G+++ FP + Y +QL M +I ++R Q + LLESPTG+GKSL+LLCS+LA
Sbjct: 36 YTILGVKLAFPCKAYPTQLSMMSMIIKGINRRQ-----NCLLESPTGSGKSLALLCSSLA 90
Query: 78 WQQNCKLKNQLA 89
WQ+ + K A
Sbjct: 91 WQEGEREKQHKA 102
>gi|328770876|gb|EGF80917.1| hypothetical protein BATDEDRAFT_1044 [Batrachochytrium
dendrobatidis JAM81]
Length = 639
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 235/692 (33%), Positives = 361/692 (52%), Gaps = 86/692 (12%)
Query: 56 HALLESPTGTGKSLSLLCSTLAWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPES 115
+ALLESPTGTGK+L++L + LAW+ E+
Sbjct: 10 NALLESPTGTGKTLTILTAVLAWR----------------------------------EA 35
Query: 116 QPSTIPPSTNGQTAQVAMNNKNVKKKMTPTIFYASRTHSQISQVISEYK-KTAYRVPMAV 174
+ + I TN +T +K + + + PTIF ASRT QI Q++ E + K+ YR +++
Sbjct: 36 ERTNI---TNIRTEHFNEKSKALNESI-PTIFIASRTQKQIQQIVRELREKSTYRPRISI 91
Query: 175 LASRKHYCTNKYVRDKENIDEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDI 234
L SR+HYC N ++ N EEC L+ + C F +++GH +Q + + DI
Sbjct: 92 LGSREHYCINPQLKRSTNKGEECTSLIETDS--CGYFNRTRQLQGHAKIQGEERNAIWDI 149
Query: 235 EDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHN 294
EDLV VG+ RGC YYAA+++A+ A+++F PY+YII+P +R + + ++ +ILI+DEAHN
Sbjct: 150 EDLVTVGKRTRGCPYYAAKALAETAEVIFAPYNYIIDPHVRASSGISLENSILIIDEAHN 209
Query: 295 IEDIARDAGSVDIDEDVLLKLQMELEQVCSVNPMI--YQPLIEMTQDLVGWIERRKATLA 352
IE D+GS D E +++ +LE + + Y LI + + + W + + +
Sbjct: 210 IESSCMDSGSADFTEQEMIETSRDLEGIVKQGHHVDEYNTLIHLIKMFLDWRCKFEDSFT 269
Query: 353 KREFQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGM--S 410
EF W G + + L + I P++ + A I+E + + L S
Sbjct: 270 IHEFSKSLKIWQGPEISQLLGDMGILPGSIPMITQ-AYATIQETMGSSDKFKLLKREYPS 328
Query: 411 VITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFK 470
+L+ + YF ++ DS W +T S WC+NPAV+FK
Sbjct: 329 QRSLQLIGGKQIYFLHYEIMFITHLLFGNTLTNILDSLP----WVYTFSFWCMNPAVIFK 384
Query: 471 DVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPL 530
+ ++ SIILTSGT+SP++SFS ELGV+F LEAPH+I D Q+ + +G +N PL
Sbjct: 385 HIESMTKSIILTSGTMSPISSFSRELGVKFAHTLEAPHIIKDD-QLCIGSLPSGANNMPL 443
Query: 531 NASYKTADGYKLMEKL------------------CNRWRETGQWSRLNAKKPLFVEPKGG 572
YK+ + + ++L + TG RL K +F EP+
Sbjct: 444 VGVYKSFETFDYQDQLGLSIARLANLIPQGLLVFLPSYMYTGLEQRLGKTKYIFTEPRAN 503
Query: 573 SQEDFEIVLKHYYNSISQGSKCAVVR-KKRVKREGNNDLNTIESQENANKKGASFLAVCR 631
++++ E ++ Y +SIS A++ R K D + + R
Sbjct: 504 AKKELENLMAKY-DSISSTESGAILFCVYRGKMSEGIDFSDHRA---------------R 547
Query: 632 GKIVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRF 691
G I VG+PFPNI DI+V K+ YN SS+ LL+G+EWY QA+RALNQA+GRCIRHR
Sbjct: 548 GVICVGLPFPNIKDIKVLQKRDYNTQRASSRGLLTGSEWYSMQAYRALNQALGRCIRHRN 607
Query: 692 DYGAIILLDERFQEERNRAHISKWLRKSIKQY 723
D+GAIILLDERF + R +++SKW+R I+Q+
Sbjct: 608 DWGAIILLDERFSQSRCTSNLSKWMRTKIRQW 639
>gi|47224934|emb|CAG06504.1| unnamed protein product [Tetraodon nigroviridis]
Length = 862
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 229/659 (34%), Positives = 346/659 (52%), Gaps = 103/659 (15%)
Query: 143 TPTIFYASRTHSQISQVISEYKKTAY-RVPMAVLASRKHYCTNKYVRDKENIDEECKLLL 201
P IF+ +RTH QI+QV E ++T Y RVPM +L+SR H C N V +E CK L
Sbjct: 230 VPKIFFGTRTHKQITQVAHELRRTVYSRVPMTILSSRDHTCVNPEVAPHSKRNELCKERL 289
Query: 202 GDRN-LGCPQFKNVHKVRGHPSLQK-GGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDA 259
++ C + V K+ LQ+ G E DIEDLV++G+ +R CSY+AAR + DA
Sbjct: 290 EAKDGRSCHYYHGVQKMGEQYQLQRVHGLCEAWDIEDLVSLGKRLRSCSYFAARELMMDA 349
Query: 260 QLVFCPYSYIINPVIRGA----------MEVDIKGAILILDEAHNIEDIARDAGSVDIDE 309
+V CPY+Y+++P+IR + M++++ G IL+LDEAHNIED AR++ S ++
Sbjct: 350 DIVLCPYNYLLDPLIRESVSLEEQLEEMMDINLSGQILVLDEAHNIEDCARESASFTLNY 409
Query: 310 DVLLKLQMELEQVC--SVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDK 367
D LL + ELE + ++ P ++PL L+ WI+ ++ L++R ++ W+G
Sbjct: 410 DSLLSSRDELESMIRNNIRPDKHEPLRAFCYSLINWIQESQSLLSERGYESASKVWSGRD 469
Query: 368 ALRELQEANISRQCFPILLECATKAIKE--------ATDTESELPHLSGMSVITLEGLFS 419
+ I+ F IL + +++ + ++P +S + I L+GLF
Sbjct: 470 MVDIFHNLGITSATFNILKQKLMAVLEKEERIGVVNGREDLVQVPTISSATSIVLKGLFM 529
Query: 420 SLTYFFSRNGSHVSDYQLALQK------YIKRDSKNPGGNWTH----------------T 457
L Y F + DY++ALQ+ + D+ + G + T
Sbjct: 530 VLDYLFRDSCRFAEDYRVALQRSFAWTNQVPPDAPDAQGFFGRPHQRQRRSIRVKSEVLT 589
Query: 458 LSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVL 517
+S WCLNPAV F D+ + SI+LTSGTLSPM SFSSELGV+F LEA HVI+ QV
Sbjct: 590 VSFWCLNPAVAFSDLGDAVRSIVLTSGTLSPMASFSSELGVKFSIQLEANHVINKS-QVW 648
Query: 518 TSVISTGPDNYPLNASYKTADGYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDF 577
+ GP L A+++ A+ Y Q++
Sbjct: 649 VGTVGAGPHGKKLCATFQQAETYTF-------------------------------QDEV 677
Query: 578 EIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGK---- 633
+L H +++G C + K + I+ E + GA +AVCRGK
Sbjct: 678 GALLLHVCQVMTKGVLCFLPSYKTY-------YDAIKHCE--ERDGALLIAVCRGKVSEG 728
Query: 634 -----------IVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQA 682
+ +GIPFPNI D+QV LK KYND + S+ LLSG+ WY QA+RALNQA
Sbjct: 729 LDFTDDNARAVVTIGIPFPNIKDLQVELKMKYNDHHARSRGLLSGHRWYEIQAYRALNQA 788
Query: 683 IGRCIRHRFDYGAIILLDERFQEERNR--AHISKWLRKSIKQYDSFDASLEGLKSFFRD 739
+GRCIRHR D+GA+IL+DER++ N+ +SKW+R+ ++ +D+F +++ L F R+
Sbjct: 789 LGRCIRHRNDWGALILVDERYKNNPNKYITGLSKWVRQLVQHHDTFSNAMQSLVVFSRE 847
Score = 67.4 bits (163), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 41/63 (65%), Gaps = 5/63 (7%)
Query: 18 YHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLA 77
Y +GG+++ FP + Y SQL M +I L+ H LLESPTG+GKSL+LLCS L
Sbjct: 8 YTIGGVKIHFPCKAYPSQLAMMNSIIRGLNAGN-----HCLLESPTGSGKSLALLCSALG 62
Query: 78 WQQ 80
WQ+
Sbjct: 63 WQR 65
>gi|148683832|gb|EDL15779.1| BRCA1 interacting protein C-terminal helicase 1, isoform CRA_a [Mus
musculus]
Length = 901
Score = 377 bits (969), Expect = e-101, Method: Compositional matrix adjust.
Identities = 225/639 (35%), Positives = 340/639 (53%), Gaps = 95/639 (14%)
Query: 172 MAVLASRKHYCTNKYVRDKENIDEEC-KLLLGDRNLGCPQFKNVHKVRGHPSLQK-GGCH 229
M +L+SR H C + V N E+C +LL G C + VHK+ +LQ G
Sbjct: 1 MTILSSRDHSCVHPEVVGNFNRKEKCMELLDGKHGKSCYFYHGVHKISNQQTLQHLQGMS 60
Query: 230 EVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILIL 289
DIE+LV++G+ ++ C YY AR + +DA +VFCPY+Y+++ IR M++ +KG ++IL
Sbjct: 61 RAWDIEELVSLGRKLKACPYYTARELIEDADIVFCPYNYLLDSQIRETMDIKLKGQVVIL 120
Query: 290 DEAHNIEDIARDAGSVDIDEDVLLKLQMELEQVC--SVNPMIYQPLIEMTQDLVGWIERR 347
DEAHNIED AR++ S + E L + EL+ + ++ ++PL ++ +L+ W+E
Sbjct: 121 DEAHNIEDCARESASYSVTEVQLRFARDELDSLINGNIRKKSHEPLRDVCYNLINWLETN 180
Query: 348 KATLAKREFQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKE--------ATDT 399
L +R ++ W+G++ L L I+ FP+L + +++ +
Sbjct: 181 SKHLVERGYESSCKIWSGNEMLLNLYRMGITTATFPVLQRHLSAVLQKEEKVTPIHGKEE 240
Query: 400 ESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVS---------DYQLALQKYI------- 443
++P +S + + L+GLF L Y F N S +S DY++A+Q+
Sbjct: 241 AIQIPIISASTQVVLKGLFMVLDYLFRENSSSISIVFPFRFADDYKVAIQQTYSWTNQIA 300
Query: 444 -------------KRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMN 490
K+ S+ G + L+ WCLNPAV F D+ + +I+LTSGTLSP+
Sbjct: 301 IFDKTGVLAVPKNKKHSRQKIG--VNALNFWCLNPAVAFSDINDKVRTIVLTSGTLSPLK 358
Query: 491 SFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTAD------------ 538
SFSSELGV F LEA HVI + QV + +GP L A+++ +
Sbjct: 359 SFSSELGVTFSIQLEANHVIS-NSQVWVGTVGSGPKGRNLCATFQHTETFEFQDEVGMLL 417
Query: 539 ----------------GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLK 582
YKL+EKL RW TG W L + K + EP+GG + DF+ +L+
Sbjct: 418 LSVCQTVSQGILCFLPSYKLLEKLRERWIFTGLWHSLESVKTVIAEPQGGEKTDFDELLQ 477
Query: 583 HYYNSIS-QGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFP 641
YY++I +G K R K D S +NA R I VGIPFP
Sbjct: 478 VYYDAIKFKGEKVC-----RGKVSEGLDF----SDDNA-----------RAVITVGIPFP 517
Query: 642 NINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDE 701
N+ D+QV LK++YND + S+ LL G +WY QA+RALNQA+GRCIRH+ D+GA+IL+D+
Sbjct: 518 NVKDLQVELKRQYNDHHSKSRGLLPGRQWYEIQAYRALNQALGRCIRHKNDWGALILVDD 577
Query: 702 RFQEERNR--AHISKWLRKSIKQYDSFDASLEGLKSFFR 738
RF NR + +SKW+R+ I+ + SF ++LE L F R
Sbjct: 578 RFNNNPNRYISGLSKWVRQQIQHHSSFASALESLTEFSR 616
>gi|145349251|ref|XP_001419051.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579282|gb|ABO97344.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 1067
Score = 374 bits (961), Expect = e-100, Method: Compositional matrix adjust.
Identities = 253/798 (31%), Positives = 400/798 (50%), Gaps = 133/798 (16%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ +V FP PY SQ+ +V+S + RA R G C AL+ESPTG+GK+L+LLC+ LAW
Sbjct: 38 IASCEVRFPLTPYKSQV----QVMSAVVRAARRGTC-ALVESPTGSGKTLALLCAALAWS 92
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVK 139
++ ES+ + + + K
Sbjct: 93 ES--------------------------------ESERREDVGVDDDEDGEEDEARKRET 120
Query: 140 KKM----TPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDE 195
K++ P I+YA+RTH+QI+Q++ E +TAY+ VLASR+HYC NK R +++
Sbjct: 121 KRIGNGKPPKIYYATRTHAQIAQIVGELSRTAYKPHTVVLASREHYCVNKSARKGGDVNA 180
Query: 196 ECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCH--EVHDIEDLVNVGQVVRGCSYYAAR 253
EC+ L+ G + +G L + + DIEDLV +G +GC Y+A++
Sbjct: 181 ECRRLMDAGAAGGDGKGCFYSGQGASKLASLAKNHPDALDIEDLVKMGTSKKGCPYFASK 240
Query: 254 SMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDI--DE-- 309
MA+ A+L+FCPY+Y+++P R AM++DI+G+++I DEAHNIED AR+A S +I D+
Sbjct: 241 IMAESAELIFCPYNYLLDPRTRSAMDIDIEGSLIIFDEAHNIEDTAREAASEEIILDDVA 300
Query: 310 ---DVLLKLQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWT-G 365
D L +++ S ++ + + + +G+ + + + ++ Q S G
Sbjct: 301 NAIDRLSEMRRRATANVSECELVLRSMKGVYDWFIGFCDEKSPSYGLKQAQEALSAMVRG 360
Query: 366 DKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVITLEGLFSSLTYFF 425
++ L+ L EA ++ + ++ K + + ++G T E + + + +
Sbjct: 361 EQILQTLAEAGLTEESVLEVMRALGVITKYNQENKDPKERVAGSVFNTCEKVLNPIKFLL 420
Query: 426 SRNGSHVSDYQLALQKYIKRD------------SKNPGGNWTHTLSLWCLNPAVVFKDVA 473
SR DY++ K + D ++ P ++ W LNPA+ F+++
Sbjct: 421 SRGEVTARDYKIVFTKTRESDRVVSTQRVNSELNRLPVEELVK-INFWALNPALAFRELV 479
Query: 474 EL---SLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPL 530
+ S++LTSGTL+P+NSF+SELGV F +EAPH +D+D QV +++ GP N L
Sbjct: 480 SENGGARSVVLTSGTLAPLNSFASELGVPFPIRMEAPHCVDMDRQVWGGIVAAGPSNIAL 539
Query: 531 NASYK---------------------TADG-------YKLMEKLCNRWRETGQWSRLN-- 560
NA YK T G Y L+E + RWRETG +
Sbjct: 540 NAGYKSRGDTSFQDELGACLRDVAKVTPHGLLMFFPSYSLLETIVRRWRETGLLRAIEQA 599
Query: 561 AKKPLFVEPK-----GGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIES 615
+ K +F EP G E VL+ YY++++ K A +
Sbjct: 600 SGKKIFQEPGKSCSYGKKPVTLETVLEKYYSAVATSVKAA-------------KHPYAPA 646
Query: 616 QENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKKYNDTYRS 660
NA +GA AVCRGK I VGIP+PNI D V+ K+ YN+ +
Sbjct: 647 PANAKCRGAILFAVCRGKISEGIDFADANARAVICVGIPYPNIKDALVAAKRSYNEEG-A 705
Query: 661 SKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSI 720
+ LLSG++WY QAFRALNQA+GRC+RHR D+GAI+L+D RF +A + KWLR ++
Sbjct: 706 HRGLLSGSKWYDQQAFRALNQAVGRCLRHRHDHGAIMLVDSRFNNSNIQA-LPKWLRPAM 764
Query: 721 KQYDS-FDASLEGLKSFF 737
++ S F ++ L++FF
Sbjct: 765 QKSASRFGDQVKSLENFF 782
>gi|344285337|ref|XP_003414418.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group J protein-like
[Loxodonta africana]
Length = 1240
Score = 363 bits (931), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 227/691 (32%), Positives = 345/691 (49%), Gaps = 118/691 (17%)
Query: 121 PPSTNGQTAQVAMNNKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYR-VPMAVLASRK 179
P N Q + A+ + K P I++ +RTH QI+Q+ E ++TAY VPM +L+SR
Sbjct: 222 PKQGNSQDSSNAIKKDHGGKSKIPKIYFGTRTHKQIAQITRELRRTAYSGVPMTILSSRD 281
Query: 180 HYCTNKYVRDKENIDEEC-KLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLV 238
H C + N E+C +LL G C + VHK+R +LQ ++ ++
Sbjct: 282 HTCVHPEAVGNFNRKEKCMELLDGKNGKSCYFYHGVHKIRDQHTLQT--------LQGMM 333
Query: 239 NVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDI 298
++ Y S +QL I+ V+ M++++K ++ILDEAHNIED
Sbjct: 334 -FSSILASTHYMPVAS----SQLWHQKCLQILPDVL--GMDINLKEQVVILDEAHNIEDC 386
Query: 299 ARDAGSVDIDEDVLLKLQMELEQVCS--VNPMIYQPLIEMTQDLVGWIERRKATLAKREF 356
AR++ S + E L + EL+ + + + + PL + L+ W+E L +R +
Sbjct: 387 ARESASYSVTEVQLWFARDELDSMVNNNIRKKDHDPLRAVCYSLIHWLEAHSEHLVERHY 446
Query: 357 QHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTES--------ELPHLSG 408
+ W+G++ + L + I+ FPIL + +++ S E+P +S
Sbjct: 447 ESSCKIWSGNEMIFHLHKMGITSATFPILQGHFSAVLQKEEKVSSVHGKEEAREIPVISA 506
Query: 409 MSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYI------------------KRDSKNP 450
+ + L+GLF L Y F +N DY++A+Q+ K ++
Sbjct: 507 STQVMLKGLFMVLDYLFRQNSRFADDYKVAIQQTYSWINQTDTSDRNEFFALPKNKKRSR 566
Query: 451 GGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVI 510
H L+ WCLNPAV F D+ E +I+LTSGTLSPM SFSSELGV F LEA HVI
Sbjct: 567 QKTAVHVLNFWCLNPAVAFSDIDEKVQTIVLTSGTLSPMKSFSSELGVTFTIQLEANHVI 626
Query: 511 DVDLQVLTSVISTGPDNYPLNASYKTAD----------------------------GYKL 542
+ + QV I +GP L A+++ + YKL
Sbjct: 627 N-NSQVWVGTIGSGPTGRNLCATFQHTETFEFQDEVGALLLSVCQTVSQGILCFLPSYKL 685
Query: 543 MEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRV 602
+EKL RW TG W L K + VEP+GG + +F+ +L+ YY++ V
Sbjct: 686 LEKLKERWHSTGLWRNLELVKTVIVEPQGGDKTEFDELLQVYYDA--------------V 731
Query: 603 KREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQ 647
K G D GA +AVCRGK I VGIPFPN+ D+Q
Sbjct: 732 KYRGEKD-------------GALLVAVCRGKVSEGLDFSDDNARAVITVGIPFPNVKDLQ 778
Query: 648 VSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEER 707
V LK++YND + + LL G +WY QA+RALNQA+GRCIRH+ D+GA+IL+D+RF+
Sbjct: 779 VELKRQYNDQHSKLRGLLPGRQWYEIQAYRALNQALGRCIRHKNDWGALILVDDRFRSNP 838
Query: 708 NR--AHISKWLRKSIKQYDSFDASLEGLKSF 736
+R + +SKW+R+ I+ + +F+++LE L F
Sbjct: 839 SRYISGLSKWVRQQIQHHSTFESALESLTEF 869
Score = 71.2 bits (173), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 44/64 (68%), Gaps = 5/64 (7%)
Query: 18 YHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLA 77
Y +GG+++ FP + Y SQL M ++ L+ Q H LLESPTG+GKSL+LLCS LA
Sbjct: 8 YTIGGVKINFPCKAYPSQLAMMNCIVRGLNSKQ-----HCLLESPTGSGKSLALLCSALA 62
Query: 78 WQQN 81
WQQ+
Sbjct: 63 WQQS 66
>gi|428173640|gb|EKX42541.1| hypothetical protein GUITHDRAFT_111516 [Guillardia theta CCMP2712]
Length = 1115
Score = 362 bits (930), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 225/638 (35%), Positives = 343/638 (53%), Gaps = 68/638 (10%)
Query: 144 PTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENID-EECKLLLG 202
P I++ASRTHSQI+Q++ E +KT Y + VL SR+HYC N V E EECK L
Sbjct: 151 PKIYFASRTHSQIAQLVRELRKTKYSPRICVLGSREHYCINPRVMASEKPKGEECKAKLK 210
Query: 203 DRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLV 262
+ + C + V ++ H LQ G +HDIE +V GC Y+AARS+A A ++
Sbjct: 211 ENS--CSFYHGVQRLENHKDLQPHGKLRLHDIEGRDRPPKV-HGCPYFAARSLAKRANVI 267
Query: 263 FCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQV 322
FCPY+Y++ P IR AM V+++G +I+DEAHNIED+ R+A S+++ + L++ + E++
Sbjct: 268 FCPYNYLVEPAIRDAMGVELEGNTVIIDEAHNIEDVCREAASLELKHEDLVETNRQWEEM 327
Query: 323 -CSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRELQEANISRQC 381
+ + Y L + ++L +++ + L ++ + + +G A + A I+ +
Sbjct: 328 QFAEDAHNYMLLDAVVRNLASYMKEQSQNLIQQNHLYSYKIQSGFIATDVFRNAGINEET 387
Query: 382 FPILLECATKAIKEATDTESEL-----PHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQ 436
L KAIK+ + E++ P S+ ++ +FS F + DY+
Sbjct: 388 LKPLNSFLQKAIKKLDEVENQREEESSPLPPAKSLKLVQDIFSKAQLLF----QNPFDYR 443
Query: 437 LALQKYIKRDSKN---PG-GNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSF 492
LA+++ R+ + PG ++SLWCLNPAV FK V+ + ++ILTSGTLSP+ SF
Sbjct: 444 LAIEQRTTREERGGRRPGQAKLELSMSLWCLNPAVAFKAVSSQTRAVILTSGTLSPITSF 503
Query: 493 SSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDN--YPLNASYKTAD------------ 538
++ELG F +APHVID QV + + P N LN SYK D
Sbjct: 504 ATELGTTFHMTYQAPHVIDTSKQVFVGSVCSVPGNPLLKLNGSYKHQDSVIYQDNLGAAV 563
Query: 539 ----------------GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLK 582
Y L+EK+ +RW TGQ+ +++ K + VEP+ G EDF+ ++
Sbjct: 564 LELCKIIPFGVLCFFPSYGLLEKVKSRWMATGQYEKIDEVKDIIVEPRTG--EDFDRAME 621
Query: 583 HYYNSI--SQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPF 640
YY++I S+G KK + K GA FLAVCRGK+ V
Sbjct: 622 SYYDAIARSKGEAAPKATKKAASKSFFKKAGQKVPTPGKAKTGAVFLAVCRGKVKV---- 677
Query: 641 PNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLD 700
KK YND + LL+G+EWY QAFRA+NQA+GRCIRH DYG+II LD
Sbjct: 678 ----------KKTYNDN-KVGDGLLNGDEWYSLQAFRAINQAVGRCIRHVNDYGSIIFLD 726
Query: 701 ERFQEERN-RAHISKWLRKSIKQYDSFDASLEGLKSFF 737
ER+Q++ + ++++SKW+R+ + Y +F+ L FF
Sbjct: 727 ERYQQKSSIKSNLSKWVRECLVDYKTFEDCAGRLGGFF 764
>gi|351703518|gb|EHB06437.1| Fanconi anemia group J protein [Heterocephalus glaber]
Length = 836
Score = 362 bits (928), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 205/581 (35%), Positives = 312/581 (53%), Gaps = 101/581 (17%)
Query: 229 HEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILI 288
++ DIE+LV++G+ ++ C YY AR + +DA ++FCPY+Y+++ IR +M++++K ++I
Sbjct: 2 YKAWDIEELVSLGRKLKACPYYTARELTEDADIIFCPYNYLLDAQIRESMDINLKEQVVI 61
Query: 289 LDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQVCSVN--PMIYQPLIEMTQDLVGWIER 346
LDEAHNIED AR++ S + E L + EL+ + + N ++PL + L+ W+E
Sbjct: 62 LDEAHNIEDCARESASYSVTEVQLRFARDELDSLVNSNIRKKDHEPLRAVCCSLINWLEA 121
Query: 347 RKATLAKREFQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKE--------ATD 398
L +R+++ W+G++ L L + I+ FPIL + +++ +
Sbjct: 122 NTEHLVERDYESSCKIWSGNEMLLNLYKMGITTATFPILQGHLSSVLQKEEKVSPIFGKE 181
Query: 399 TESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYI--------------- 443
E+P +S + I L+GLF L Y F +N DY++A+Q+
Sbjct: 182 ETIEVPIISASTQIMLKGLFMVLEYLFRQNSRFADDYKVAIQQTYSWTHHTDISDKNGFF 241
Query: 444 ---KRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQF 500
K + N H L+ WCLNPAV F D+ +I+LTSGTLSPM SFSSELGV F
Sbjct: 242 AVPKNKKSSRQKNAVHVLNFWCLNPAVAFSDINGKVRTIVLTSGTLSPMKSFSSELGVTF 301
Query: 501 GTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTAD---------------------- 538
LEA HVI+ + QV I +GP L A+++ +
Sbjct: 302 TIQLEANHVIN-NSQVWVGTIGSGPKGRNLCATFQHTETFEFQDEVGALLLSVCQTVSQG 360
Query: 539 ------GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGS 592
YKL+EKL RW TG W L K + VEP+GG + DF+ +L+ YY++
Sbjct: 361 ILCFLPSYKLLEKLKERWLYTGLWHNLELVKTVIVEPQGGEKTDFDELLQVYYDA----- 415
Query: 593 KCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVG 637
VK G D GA +AVCRGK I +G
Sbjct: 416 ---------VKYRGEKD-------------GALLVAVCRGKVSEGLDFSDDNARAVITIG 453
Query: 638 IPFPNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAII 697
IPFPN+ D+QV LK++YND + + LL G +WY QA+RALNQA+GRCIRH+ D+GA+I
Sbjct: 454 IPFPNVKDLQVELKRQYNDHHSKLRGLLPGRQWYEIQAYRALNQALGRCIRHKNDWGALI 513
Query: 698 LLDERFQEERNR--AHISKWLRKSIKQYDSFDASLEGLKSF 736
L+D+RF+ +R + +SKW+R+ I+ + +F+++LE L F
Sbjct: 514 LVDDRFRNNPSRYISGLSKWIRQQIQHHLTFESALESLAEF 554
>gi|260808249|ref|XP_002598920.1| hypothetical protein BRAFLDRAFT_79851 [Branchiostoma floridae]
gi|229284195|gb|EEN54932.1| hypothetical protein BRAFLDRAFT_79851 [Branchiostoma floridae]
Length = 1352
Score = 360 bits (923), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 216/604 (35%), Positives = 316/604 (52%), Gaps = 86/604 (14%)
Query: 139 KKKMTPTIFYASRTHSQISQVISEYKKTAYR-VPMAVLASRKHYCTNKYVRDKENIDEEC 197
KKK P IF+ +RTH QI+Q+ E KTAY+ M +L+SR+H C N +R +N + C
Sbjct: 220 KKKRAPKIFFGTRTHKQIAQITRELGKTAYKGARMTILSSREHTCINASIRGNKN--DGC 277
Query: 198 KLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMAD 257
+ LL + C NV ++ +Q G DIE+LV +G+ ++ C YY+AR +
Sbjct: 278 RELLDHK--ACSFHHNVVRMSNQAQIQYRGL-SAWDIEELVKLGKKIKACPYYSARELML 334
Query: 258 DAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQM 317
+A +VFCPY+Y+++PVIR M++ +K +++LDEAHNIED AR+A S + ED L
Sbjct: 335 EADIVFCPYNYLVDPVIRENMQISLKNHVIVLDEAHNIEDSAREAASFSMTEDQLDNCMS 394
Query: 318 ELEQVCSVNPMI--YQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRELQEA 375
ELE + N + ++ L + WI+ + L +R+F+ TG + L
Sbjct: 395 ELENLVLHNVQMDDHRALHIVCGSFKKWIKDSSSLLKERDFERQTKVQTGMDMVAVLNTM 454
Query: 376 NISRQCFPILLECATKAIKEATDTES--------ELPHLSGMSVITLEGLFSSLTYFFSR 427
I+ F +L K + TD E+ E L S L+G+F L + F
Sbjct: 455 GINPDTFGLL----KKNLSAVTDPENKPEPKQGQEQMWLGSASAQMLKGMFFVLGFLFKE 510
Query: 428 NGSHVSDYQLALQK---YIKRDSKNPGG------------NWTHTLSLWCLNPAVVFKDV 472
N DY++ +++ Y R P G ++H L WCLNPAV F ++
Sbjct: 511 NMKFAEDYRVVIERTVEYSNRPEYFPNGYVRMKKGRGMDKTFSHQLHFWCLNPAVAFSEL 570
Query: 473 AELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNA 532
A +I+L+SGTLSP++SF SELGV F LEA HV+ QV + GP L A
Sbjct: 571 ANCR-AIVLSSGTLSPIDSFQSELGVPFPIQLEANHVVGKK-QVWVGTVGAGPRGRKLMA 628
Query: 533 SYKTAD-----------GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVL 581
+Y+ + YKL+ KLC RW+ T W ++ K + EP+GG + DF+ +L
Sbjct: 629 TYQHTETISHGVLCFLPSYKLLGKLCQRWQMTRLWEQIEEHKQVIREPQGGDKADFDDIL 688
Query: 582 KHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGAS-FLAVCRGK------- 633
K +Y++I KC+ E EN +G + FLAVCRGK
Sbjct: 689 KQFYDAI----KCS------------------EDTENGGGRGGALFLAVCRGKVSEGLDF 726
Query: 634 --------IVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGR 685
I VGIP+PN D+QV LK+ YN+ + ++ LL+G +WY QA+RALNQA+GR
Sbjct: 727 ADNNARAVITVGIPYPNFKDLQVELKQNYNNQHSGARGLLTGRQWYEIQAYRALNQALGR 786
Query: 686 CIRH 689
CIRH
Sbjct: 787 CIRH 790
Score = 67.0 bits (162), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 43/66 (65%), Gaps = 5/66 (7%)
Query: 14 PLNAYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLC 73
P Y + G+ V+FP Y +Q+ M +++ L+R Q + LLESPTG+GKSL+LLC
Sbjct: 7 PGRKYTISGVNVQFPCNAYPTQIAMMHKILQGLEREQ-----NCLLESPTGSGKSLALLC 61
Query: 74 STLAWQ 79
S LAWQ
Sbjct: 62 SCLAWQ 67
>gi|321476840|gb|EFX87800.1| hypothetical protein DAPPUDRAFT_311920 [Daphnia pulex]
Length = 824
Score = 358 bits (918), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 234/664 (35%), Positives = 331/664 (49%), Gaps = 137/664 (20%)
Query: 144 PTIFYASRTHSQISQVISEYKKTAY-RVPMAVLASRKHYCTNKYVRDKENIDEECKLLLG 202
P IF+ +RTH QI+QV+ E+++T Y PM VLASR+H C + V N
Sbjct: 60 PKIFFGTRTHKQITQVVKEFRRTVYCNTPMGVLASREHTCIHPEVSRSAN---------- 109
Query: 203 DRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLV 262
KN ++ P L DIEDLV++G+ +R C YYA+R M++ AQ+V
Sbjct: 110 ---------KNEDQIFTSPLL---------DIEDLVSLGRRIRVCPYYASRDMSEQAQIV 151
Query: 263 FCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARD-AGSVDIDEDVLLKLQMELEQ 321
F PY+Y+I+P +R +M++ I I+ILDEAHNIED AR+ AG ED L L + E+
Sbjct: 152 FSPYNYLIDPRVRQSMKIPINDNIIILDEAHNIEDSARESAGGSWSQEDFRLALN-DCEK 210
Query: 322 VCSVNPMIYQP---LIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRELQEANIS 378
+ + +P + + L + + ++ WI + + F TG + + AN+S
Sbjct: 211 IGNRHPTMEKEIDRLAKFSSYMMQWIGKHATNMKSVGFDREVHVMTGTEFV-----ANLS 265
Query: 379 RQCFPILLECATKAIKEATDTE-----------SELPHLSGMSVITLEGLFSSLTYFFSR 427
+ + KAI + E S+ P LSG + LEG + +
Sbjct: 266 VDGYGPEMLVELKAIIDYIFNEQLESDWNDKEGSQDPQLSGATQTLLEGFLMIMDLMLNG 325
Query: 428 NGSHVSDYQLALQKYIKR-DSKNPGGN----------WTHTLSLWCLNPAVVFKDVAELS 476
N H DY+ + + ++R K PG + WT+ L+LWCLN AVV ++ E +
Sbjct: 326 NQIHRDDYRAVVVRTVERKQKKGPGSSFFGKANIASQWTYALNLWCLNSAVVMHEIKEST 385
Query: 477 LSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKT 536
SII+TSGTLSP+ S+ SEL + F LEA HVI +V IS GP N LN ++K
Sbjct: 386 RSIIVTSGTLSPLASYQSELDIDFKLTLEANHVIPAK-RVWIGTISQGPRNTLLNGTFKV 444
Query: 537 AD----------------------------GYKLMEKLCNRWRETGQWSRLNAKKPLFVE 568
Y L+EKL RW++TG W L+ K + E
Sbjct: 445 TGTFEYQDELGRLALSVCQTIPHGVLCFLPSYSLLEKLVTRWQDTGLWQHLSNYKTIVCE 504
Query: 569 PKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLA 628
+ DFE LK +Y++I +++ N GA LA
Sbjct: 505 SRDS--RDFEETLKSFYSAI---------------------------EDSVN--GALMLA 533
Query: 629 VCRGK---------------IVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCN 673
VCRGK I VGIPFPN D QV LK++YND +S LL+G+EWY
Sbjct: 534 VCRGKVSEGLDFTDNNARAVICVGIPFPNFKDTQVELKRQYNDKLSASTPLLNGSEWYEI 593
Query: 674 QAFRALNQAIGRCIRHRFDYGAIILLDERF-QEERNRAHISKWLRKSIKQYDSFDASLEG 732
QAFRALNQA+GRCIRH+ D+GAI+L+D+RF + R +SKW+R SI+ + F L
Sbjct: 594 QAFRALNQALGRCIRHKADWGAILLVDDRFAKTPRYVNQLSKWVRSSIRHFHCFPPMLNS 653
Query: 733 LKSF 736
LK F
Sbjct: 654 LKEF 657
>gi|325191332|emb|CCA26115.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 957
Score = 357 bits (917), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 268/906 (29%), Positives = 421/906 (46%), Gaps = 221/906 (24%)
Query: 20 VGGIQVEFPY--QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLA 77
+ G +V F +P+ +QL M RV+ L Q HALLESPTG+GK+L++LCS L+
Sbjct: 22 IMGYKVAFATDKKPFPAQLAVMNRVLLALKTNQ-----HALLESPTGSGKTLAILCSCLS 76
Query: 78 ----------WQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPE------------- 114
+Q+ + K + N ++S D A P + F+PE
Sbjct: 77 FQKQYTEELLFQKEVQQKEEALNTNNSVQD--ASFSPSEDRKPFVPEDDDEDFEPNDSAV 134
Query: 115 ------------------------SQPSTIPPSTNGQTAQVAMNNKNVKKKMT------- 143
S PS +T G Q+ N V K+
Sbjct: 135 VKFADMWNSHDPILMRDTSNKAEASCPSNAASTTIGYQDQIEHNKDAVATKIRRLPASFT 194
Query: 144 --------------------------PTIFYASRTHSQISQVISEYKK--TAY------- 168
P IF+ SRTHSQ++Q + E++K ++Y
Sbjct: 195 SASEPDPDRIGSNVTFSPSTIAAVRPPKIFFCSRTHSQLAQAVEEFRKCPSSYFHFLGDY 254
Query: 169 -------RVPMAVLASRKHYCTNKYVR----DKENIDEECKLLLGDRNLGCPQFKNVHKV 217
R+ +LAS+ H+C N + D ++DE+C+ LL + C + +++
Sbjct: 255 PELEFRSRLRSCILASKSHFCINSRAKQNKHDNRSVDEKCQNLLSENK--C----SFYRL 308
Query: 218 RGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGA 277
+ Q V DIE+ +++ + + C+YY+A + A +VFCPYSY+I+P IR A
Sbjct: 309 GRESNAQSPKIPHVWDIEEFISLSKRKKECAYYSALNTLPFADIVFCPYSYLIHPSIRSA 368
Query: 278 MEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQVC--SVNPMIYQPLIE 335
+++ +K AI++LDEAHN+EDI R + S ++ +D L QV + P Y L++
Sbjct: 369 VKISVKDAIVVLDEAHNVEDICRSSASFEVTKDTLSICIQSFTQVIEKANRPQAYPSLLK 428
Query: 336 MTQDLVGWIERRKAT--LAKREFQHFFSCWTGDKALRELQE---------------ANIS 378
+ W++ T L F+ + W+G A+ E +N+
Sbjct: 429 ILTGFERWMDMVSTTVKLQTTGFEEESNVWSGSDAIAMFDEYAGMNQDNFSSLQVASNLV 488
Query: 379 RQCFPILL--ECATKAIKEATDTESELPH--LSGMSVITLEGLFSSLTYFFSRNGSHVSD 434
+ IL+ E T +++ + P L +++ T+E + ++ F N ++ D
Sbjct: 489 HEHERILMQEEKGTGNDEKSGSIQPNSPEVLLRPIALKTVETILCVASFMFRDNFKYLDD 548
Query: 435 YQLAL-----QKYIK----------RDSK---NPGGNWTHTLSLWCLNPAVVFKDVAELS 476
++L QK+ K +D K N G W L++WCL+ AVVF D+A+ +
Sbjct: 549 FKLLFFKSRAQKWSKDIPSDDHLAMKDKKATTNTAG-WQFRLAIWCLSGAVVFADIAKDA 607
Query: 477 LSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKT 536
S+ILTSGTL+PM+S++ ELG+ FG LEA HV+D+ QV I GP L+ +Y+
Sbjct: 608 RSVILTSGTLTPMDSYAGELGLDFGVRLEANHVVDMRTQVFIRAIMQGPGQVDLSTTYQN 667
Query: 537 AD----------------------------GYKLMEKLCNRWRETGQWSRLNAKKPLFVE 568
+ Y+L+ L NRW++TG W ++N K +F E
Sbjct: 668 QNTFRYQDALGNLLKQYVELIPGGILMFLPSYRLLGILVNRWKQTGVWYQINTAKKVFTE 727
Query: 569 PKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLA 628
+ +F+ L+ Y K AV K + ++D ++ ++GA FLA
Sbjct: 728 ARSAGI-NFDADLEQY--------KLAV-----QKEDSSSD------AQSPKQRGAIFLA 767
Query: 629 VCRGK---------------IVVGIPFPNINDIQVSLKKKYNDTY-RSSKNLLSGNEWYC 672
V RGK I VGIPFPN+ +QVSLK++Y D + + LL+G++WY
Sbjct: 768 VYRGKVSEGIDFSDGNARAVIAVGIPFPNLKQLQVSLKREYQDRKCKIERKLLNGHQWYQ 827
Query: 673 NQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEG 732
QAFRALNQA+GRCIRHR DYGAI L+D R + + + SKW+R I + + D L
Sbjct: 828 LQAFRALNQAVGRCIRHRNDYGAIFLVDSRHRMQAYAPNFSKWMRSLIVEQEHTDDCLPE 887
Query: 733 LKSFFR 738
L FF+
Sbjct: 888 LSQFFQ 893
>gi|321471679|gb|EFX82651.1| hypothetical protein DAPPUDRAFT_48831 [Daphnia pulex]
Length = 720
Score = 357 bits (916), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 239/676 (35%), Positives = 342/676 (50%), Gaps = 127/676 (18%)
Query: 144 PTIFYASRTHSQISQVISEYKKTAY-RVPMAVLASRKHYCTNKYVRDKENIDEECKLLLG 202
P IF+ +RTH QI+QV+ E+++T Y + M VLASR+H C + V N +E C+ L
Sbjct: 1 PKIFFGTRTHKQITQVVKEFRRTMYCKTRMTVLASREHACIHPDVSRSFNKNEGCQQL-N 59
Query: 203 DRNLGCPQFKNVHKVRGHPSLQKG--GCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQ 260
D+ N+++ RG L K G DIEDLV +G+ ++ C YYA+R + + A+
Sbjct: 60 DQT----SESNLYRTRGIEMLSKHVYGYDNGWDIEDLVGLGRKLQRCPYYASRDLMEQAE 115
Query: 261 LVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDI-DEDVLLKLQMEL 319
+VF PY+Y+I+P +R M + I G+I+ILDEAHNIED AR A S ED L L +
Sbjct: 116 IVFVPYNYLIDPAVRKRMHIPINGSIIILDEAHNIEDSARAAASGAFSQEDFRLALN-DC 174
Query: 320 EQVCSVN-------------PMIYQPLIEMTQDLVGWIERR----KATLAKREFQHFFSC 362
E+V +V + Q M + G + +A + +EF
Sbjct: 175 EKVTNVRVKDQKSKDRLKQISKLAQFSSYMMNLMDGMAPKSSFDDEAIMTGKEFL----- 229
Query: 363 WTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVITLEGLFSSLT 422
DK + + NI + ++ E + ++ + L HL + TLE + +
Sbjct: 230 ---DKLVLDEYGPNILSELSFVIEEGEEEPEIDSKLVDPRL-HLLATTRATLEDFLTIVN 285
Query: 423 YFFSRNGSHVSDYQLAL--------------QKYIKRDSKNPGGNWTHTLSLWCLNPAVV 468
+H+ DYQ+A+ Q ++ + S +P WTH L LWCLNPA+V
Sbjct: 286 LMLGDEQTHLDDYQVAVARTSNFVIISNYLTQVFLNKFSSSPS-RWTHVLKLWCLNPAIV 344
Query: 469 FKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNY 528
K + + + SII+TSGTLSP++S++SELG+ F LEA HVI + +V + IS GP +
Sbjct: 345 LKQIRQTTRSIIVTSGTLSPLDSYASELGIDFMITLEASHVIPAN-RVWIASISQGPRST 403
Query: 529 PLNASYKTAD----------------------------GYKLMEKLCNRWRETGQWSRLN 560
LN SYKT Y L+EKL RW++TG W L+
Sbjct: 404 KLNGSYKTTSTFEYQDELGRLMLSVCQTIPHGVLCFLPSYSLLEKLVARWQDTGLWQHLS 463
Query: 561 AKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENAN 620
A K L E + S FE LK +Y++I +
Sbjct: 464 AIKTLVCESRNSSA--FEETLKDFYSAIED-----------------------------S 492
Query: 621 KKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKKYNDTYRSSKNLL 665
+ GA LAVCRGK + VGIPFP + D QV LK+KYND + +LL
Sbjct: 493 QSGALMLAVCRGKVSEGLDFTDNNARAVVCVGIPFPYLKDKQVELKRKYNDKKSTCSSLL 552
Query: 666 SGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEE-RNRAHISKWLRKSIKQYD 724
SG+EWY QAFRALNQA+GRCIRH+ D+GAI+L+D+RF + R +SKW R SI+ YD
Sbjct: 553 SGSEWYEIQAFRALNQALGRCIRHKGDWGAILLVDDRFAKTPRYVNQLSKWARSSIRHYD 612
Query: 725 SFDASLEGLKSFFRDV 740
F L L F +++
Sbjct: 613 YFAPMLHYLSEFTKEL 628
>gi|410898938|ref|XP_003962954.1| PREDICTED: regulator of telomere elongation helicase 1-like
[Takifugu rubripes]
Length = 1074
Score = 356 bits (913), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 259/807 (32%), Positives = 388/807 (48%), Gaps = 150/807 (18%)
Query: 15 LNAYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCS 74
+++ + G+ V FP+ PY Q +M +VI L + + +LESPTGTGK+L LLC+
Sbjct: 1 MSSLTLNGVTVNFPFTPYDCQKDYMTKVIECLQKRN-----NGVLESPTGTGKTLCLLCA 55
Query: 75 TLAWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMN 134
TLAW++ +LK+Q++ + + L GG ++ P T VA +
Sbjct: 56 TLAWRE--QLKDQISR--------KMIERRL---GGETSQNIPIT-------SWGSVAAD 95
Query: 135 NKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENID 194
+ P I YASRTHSQ++QVI E K T+YR ++VL SR+ C N+ V +E+
Sbjct: 96 GEATCYTDIPKIIYASRTHSQLAQVIKELKNTSYRPKISVLGSREQLCINQEVMRQESSH 155
Query: 195 EE---CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYA 251
+ C+ + R+ CP + N ++ S + H + D+EDLV G R C YY
Sbjct: 156 VKVHMCRRKVSTRS--CPFYNNTEEI----STDRELTHSILDVEDLVKFGNKKRVCPYYL 209
Query: 252 ARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDE-D 310
+RS+ +A ++F PY+Y+++P R A +++ GA++I DEAHN+E ++ S D+ D
Sbjct: 210 SRSLKQEADIIFMPYNYLVDPKSRRAHNIELNGAVVIFDEAHNLEKTCEESTSFDLTPYD 269
Query: 311 V------LLKLQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWT 364
V + +L +E Q S+ P I + + D G ++ T+AK + +
Sbjct: 270 VASAIAAVDRLLLEQVQDASLGPTITE---QFNADYSG-LKIDATTIAKIK-KILLDLEA 324
Query: 365 GDKALRELQEANISRQCFPI--LLECATKAIKEATDTESELPHLSG---------MSVIT 413
+ E I++ I LLE A + T+ L +SG +
Sbjct: 325 AIDSYDVPSERGITKPGIFIYELLERAHLTYQTKTEVHEALEQISGYLAGQSGIFLQTGG 384
Query: 414 LEGLFSSLTYFFSRNGSH--VSDYQLALQKYIKRDS----KNPGGNWT--------HTLS 459
L+ L L F + S V + +I RD+ K WT + LS
Sbjct: 385 LQKLADILQLVFCGDPSEKDVKSSAAHFKVHIHRDTSHKKKQTTDIWTTSSSNKQGNILS 444
Query: 460 LWCLNPAVVFKDVAELSLS-IILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLT 518
WC +P +D+ + IILTSGTLSP++SF+SE+ ++F LE HVID D Q+
Sbjct: 445 YWCFSPGFSMQDLVNQGVRCIILTSGTLSPLSSFTSEMRIEFPVSLENSHVIDRD-QIFV 503
Query: 519 SVISTGPDNYPLNASYKTA----------------------------DGYKLMEKLCNRW 550
SV+ GPD L++++ + LMEK+ W
Sbjct: 504 SVVDRGPDGVQLSSAFDKRFVPENMASLGNTVANLTRVVPHGLLVFFSSFPLMEKMLEFW 563
Query: 551 RETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDL 610
R GQ R+++ KP+FVEPKG + +F V+ YYN + ND
Sbjct: 564 RANGQAERIDSLKPIFVEPKG--KANFTEVIDGYYNKV-------------------NDP 602
Query: 611 NTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKKYN 655
T KG SF AVCRGK I+ G+PFP D +V LK ++
Sbjct: 603 QT---------KGGSFFAVCRGKASEGLDFADTFGRAVIITGLPFPPKMDPRVILKMQFL 653
Query: 656 DTYRSSKN----LLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAH 711
D S+K LSG +WY QAFRA+NQAIGR IRHR D+GAI+L D RF+ RA
Sbjct: 654 DEMSSNKTSKLKFLSGQQWYKQQAFRAVNQAIGRVIRHRHDFGAILLCDHRFKNPDARAQ 713
Query: 712 ISKWLRKSIKQYDSFDASLEGLKSFFR 738
+ W++ + QYDSF + + FFR
Sbjct: 714 LPLWVKPYVNQYDSFGNVIRDVSKFFR 740
>gi|345487716|ref|XP_001605873.2| PREDICTED: Fanconi anemia group J protein homolog [Nasonia
vitripennis]
Length = 950
Score = 350 bits (899), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 248/814 (30%), Positives = 383/814 (47%), Gaps = 139/814 (17%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ G+ V+FP PY SQ+ M VI G H LLESPTG+GK+L+LLC+ L WQ
Sbjct: 175 IAGVPVKFPVSPYRSQISVMNAVIKGCK-----GKEHCLLESPTGSGKTLALLCAALGWQ 229
Query: 80 QNCK---LKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNK 136
++ + L + + + PD DP G QP S + A K
Sbjct: 230 ESFEQSHLLDAAKKLRNHDPD-----DP----SGL---CQPGK---SVDDWKAIEFDETK 274
Query: 137 NVKKKMTPTIFYASRTHSQISQVISEYKKTAY-RVPMAVLASRKHYCTNKYVRDKENIDE 195
+K P I+Y SRTH QI QVI E++KTAY M +L+SR+H C V+ +
Sbjct: 275 EANEKKIPKIYYGSRTHKQIEQVIREFRKTAYAHKNMTILSSREHTCIQSPVKGISKT-Q 333
Query: 196 ECKLLL--GDRNLGCPQFK--NVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYA 251
C LL + GC +K N + + +L G DIEDLV++G+ + C Y+A
Sbjct: 334 LCNNLLDPAKKTGGCEYYKENNKQAISCNSALSSCGLKTPWDIEDLVDLGKQEKACPYFA 393
Query: 252 ARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDV 311
AR++ +A ++FCPY+Y+I+PVIR M++++ G ++I+DEAHNIE I RD GS D ED
Sbjct: 394 ARALMAEADIIFCPYNYLIDPVIRETMKINLNGDVVIVDEAHNIESICRDVGSADFREDN 453
Query: 312 LLKLQMELEQVCSV---NPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFS-CWTGDK 367
L + + + V ++ N Y+ L + ++ I+ ++ + +++ S CWTG++
Sbjct: 454 LGEAIEDCKLVANLLVRNNESYKLLEQYISSMLKMIQEQQLPQSTNQYEDVTSACWTGEQ 513
Query: 368 ALRELQEANISRQCFPILLECATKAIKEATDTESELPHLS--------------GMSVIT 413
+ + F A+K+ + + ++ G
Sbjct: 514 TWTLFKMHKLGGPAFAEFEVACKIAVKDYNEVKEDIKESKMAGHQEEEYEYDEFGKMKKK 573
Query: 414 LEGLFSSLTYFFS-------------RNGSHVSDYQLALQKYIKRDSK----------NP 450
++T+ ++ + DY+ + + +D+K
Sbjct: 574 KNKKKPAITFVTKKLLEELLSSLKNIQHAEYSKDYRCTISQSYHKDAKVKMEENKWTSGQ 633
Query: 451 GGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVI 510
GG T+ C+N A+VF +A + +IL SGTLSP ++F SELG +F L A HV+
Sbjct: 634 GGRRLRTIKFMCMNSAIVFSQMARATRCVILASGTLSPTSTFESELGTKFVHKLHANHVV 693
Query: 511 DVDLQVLTSVISTGPDNYPLNASYKTAD----------------------------GYKL 542
D QV I++GP L A+YK Y +
Sbjct: 694 PRD-QVYVRGIASGPKGTTLRATYKNVQMLPFKDDLGRLVLDVCQTVPHGVLCFFSSYSM 752
Query: 543 MEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRV 602
M +RW+ET W L K + EP+ S D E +++ + + I ++
Sbjct: 753 MLSQIDRWKETDIWYELQQCKHIVQEPR--SNNDLEDIMREFRDVI----------RETA 800
Query: 603 KREGNNDLNTIESQENANKKGASFLAVCRGKIV---------------VGIPFPNINDIQ 647
RE +N GA AV RGK+ +GIP+ ND Q
Sbjct: 801 DREAACGIN-----------GALLFAVFRGKVAEGIDFSDNEARAVLTIGIPYAVQNDPQ 849
Query: 648 VSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEER 707
V LK++YND +R +K LL G EWY QA+RALNQA+GRCIRHR D+GA++L+DER
Sbjct: 850 VKLKREYNDMHR-NKGLLPGGEWYSVQAYRALNQALGRCIRHRNDWGAVLLVDERLMWPD 908
Query: 708 NRAHISKWLRKSIKQYDSFDASLEGLKSFFRDVK 741
+ ++ KW+R+ ++ +D E LK F ++ K
Sbjct: 909 SINYLPKWIREMRREGAIYDLKSE-LKEFVKEQK 941
>gi|42563365|ref|NP_178113.3| regulator of telomere elongation helicase 1 [Arabidopsis thaliana]
gi|332198212|gb|AEE36333.1| regulator of telomere elongation helicase 1 [Arabidopsis thaliana]
Length = 1040
Score = 347 bits (890), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 259/791 (32%), Positives = 383/791 (48%), Gaps = 108/791 (13%)
Query: 18 YHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLA 77
Y + GI VEFP++ Y SQ+++M RVI +L CHALLESPTGTGK+L LLC+TLA
Sbjct: 49 YSIRGINVEFPFEAYQSQIIYMDRVIESLQ-----NKCHALLESPTGTGKTLCLLCATLA 103
Query: 78 WQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKN 137
W+++ L + S K + IP S S P S +G A
Sbjct: 104 WRKS------LGSFSTRKDRKNSA----------IPWSD-SDEPLSQSGGGGGGAF---- 142
Query: 138 VKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRD--KENIDE 195
PTI YASRTHSQ+ QVI E K+++YR M VL SR+ C N+ V + +
Sbjct: 143 ------PTIVYASRTHSQLRQVIKELKRSSYRPKMVVLGSREQLCVNEEVNSLRGKALTN 196
Query: 196 ECKLLLGDRN-LGCPQFKNVHKVRGHPSLQKGGCH---EVHDIEDLVNVGQVVRGCSYYA 251
C+ L R C F + P K H E DIEDLVN+G+ C YY
Sbjct: 197 ACQYLCKKRGKRQCNHFNRL------PDYLKHNPHIGDEPVDIEDLVNIGKDSGPCPYYI 250
Query: 252 ARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDV 311
R + D ++F PY+Y+I+ R ++V+ ++LI DEAHN+E + D+ S D+ V
Sbjct: 251 TRELHKDVDIIFAPYNYLISNGYRKFLKVNWTNSVLIFDEAHNLESLCADSASFDL-PSV 309
Query: 312 LLKLQMELEQVC--------------SVNP---MIYQPLIEMTQDLVGWIERRKATLAKR 354
LL + Q C S+NP I + L+ Q+L+ K + KR
Sbjct: 310 LLSACISEAQECVQLAAARRDSLNDVSINPENFAILKGLLLKLQELIS-----KVPIPKR 364
Query: 355 EFQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVITL 414
+ + F G L+ NI+ + P L+ +A A E E + + L
Sbjct: 365 D-EGFTK--PGPYIYEMLKSLNITHETAPKLIGTVEEA---AVFLEEEKQRTATNAGSKL 418
Query: 415 EGLFSSLTYFFSRNGS-HVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVA 473
E + L F NGS H Y++ +Q+ + + G + TLS WC +P + D+A
Sbjct: 419 EIIADMLKLIFRENGSNHADVYRVHVQELEQNSTDVMKGKVSRTLSWWCFSPGITMLDIA 478
Query: 474 ELSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNA 532
+ + SIILTSGTLSPM+S + EL + F LE PHVI + Q+ V+STGP Y LN+
Sbjct: 479 QKGVGSIILTSGTLSPMDSLAQELKLDFPIRLENPHVISSN-QLWAGVVSTGPSGYVLNS 537
Query: 533 SYKTADGYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKH--YYNSISQ 590
SY+ D + ++L N +SR+ + L P + K+ Y NS++
Sbjct: 538 SYRNRDVPEYKQELGN---AIVNFSRVVPEGLLIFFPSYYLMDSCITFWKNGCYRNSMTV 594
Query: 591 GSKCAVVRKKRVKREGNNDLNTI-----ESQENANKKGASFLAVCRGK------------ 633
+ ++K ++ + ++ E ++ G F AVCRGK
Sbjct: 595 WERICKLKKPVIEPKDSSLFPAAMRDFSEKLQDRATSGVVFFAVCRGKVSEGLDFADGAG 654
Query: 634 ---IVVGIPFPNINDIQVSLKKKY-------NDTYRSSKNLLSGNEWYCNQAFRALNQAI 683
++ G+P+ + D +V LK+++ D LLSG+ WY +A RA+NQAI
Sbjct: 655 RAVVITGLPYARVTDPRVKLKREFLDEQSQLADVKLPRSTLLSGSMWYSQEAARAVNQAI 714
Query: 684 GRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFRDVKGW 743
GR IRHR DYGAII D+RF++ ++ IS W+R ++K Y + + L FFR +
Sbjct: 715 GRVIRHRHDYGAIIFCDDRFEQPSQQSKISLWIRPNVKCYSRYGEVISDLARFFRTERSN 774
Query: 744 VGKKMFNGLEN 754
++ EN
Sbjct: 775 FPARLVTEQEN 785
>gi|339240165|ref|XP_003376008.1| fanconi anemia group J protein-like protein [Trichinella spiralis]
gi|316975301|gb|EFV58747.1| fanconi anemia group J protein-like protein [Trichinella spiralis]
Length = 822
Score = 346 bits (888), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 249/791 (31%), Positives = 381/791 (48%), Gaps = 167/791 (21%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
VGG + FP+ PY SQ M R + L + + L+ESPTGTGKSL+LLCS LAWQ
Sbjct: 18 VGGADISFPFSPYPSQRAIMDRTLRALKHSN-----NCLIESPTGTGKSLALLCSALAWQ 72
Query: 80 Q----NCKLKNQLANISHSKPDT-EAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMN 134
+ N K N + +P + + +T+ +N ++ + PP T M+
Sbjct: 73 KKFLGNRKSMNDIKIDKSPQPQSCKVMTNLTSNFEDSFEDTNDFSSPPRKKYSTNVCKMD 132
Query: 135 ------------------NKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYR-VPMAVL 175
+K K P IFYA+RTH Q++Q++ E KKT Y+ V M ++
Sbjct: 133 LYESSFEDEYCLDGAQNDGPCLKSKSCPKIFYAARTHKQLAQMVRELKKTHYQNVKMTIM 192
Query: 176 ASRKHYCTNKYVRDKENIDEEC-KLLLGDRNLGCPQFKNVHK----VRG-----HPSLQK 225
ASR+ C N V + + C KLLL +N GC +N+ K + G + S+++
Sbjct: 193 ASREFTCLNPNVCQEVDKSAACQKLLLDHKNGGCIFMRNLKKYDRNISGLRKLLYYSIKR 252
Query: 226 GGCHE------VHDIEDLVNVGQVVRGCSYYAARS-MADDAQLVFCPYSYIINPVIRGAM 278
E DIED++ +G+ C Y+A +A DAQL+FCPY+Y+I+P+IR +
Sbjct: 253 KSLEETTDSGFAWDIEDIMQLGECHTICPYFACIDILARDAQLIFCPYNYLIDPMIRDTL 312
Query: 279 EVDIKGAILILDEAHNIEDIARDAGSVDIDE---DVLLKLQMELEQVCSVNPMIYQPLIE 335
++ +KG I+I DEAHN+EDI R+A S +I + D+ + + L + + +P +
Sbjct: 313 QISLKGQIIIFDEAHNMEDICREASSFEIKKMELDMAINILTLLAEKSDFINEVAKPFVS 372
Query: 336 MTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRELQEANISRQC---FPILLECATKA 392
+++V WIER K K WTG +LQ + R+ +L C +
Sbjct: 373 YAKNIVDWIEREKGLYTK--------IWTGADMYVQLQSMGLQRESIDELKTVLSCLLEV 424
Query: 393 IKEATDTESELPHLSGMSVIT----LEGLFSSLTYFFSRNGSH------VSDYQLALQK- 441
++ + ++ ++ +E L +L Y + ++ Y++ L+K
Sbjct: 425 DSNSSQGTGKHRVINDDKLLNCIKPMEKLLYALDYLYRDFDNYGEKNFGCYSYRMCLRKE 484
Query: 442 ---YIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGV 498
+K DSKN F DV+ + S+IL SGTLSP+ S+++ELG+
Sbjct: 485 RLELLKSDSKN----------------LRAFDDVSSKTKSVILASGTLSPLKSYATELGL 528
Query: 499 QFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTAD-------------------- 538
F LEAPHV+ + + S I GP++ PL A+++ A+
Sbjct: 529 PFQFSLEAPHVVPPERMWIGS-IGVGPNDIPLKATFQQAESFAFQDELASLLTDVCNVVP 587
Query: 539 --------GYKLMEKLCNRWRET-GQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSIS 589
Y+L+ KL NRW++ G W RLN K + VEPKG E E L +Y +I
Sbjct: 588 GGILCFIPSYRLLNKLVNRWKQVPGLWDRLNDSKQVIVEPKGS--EHLESALTSFYYAIE 645
Query: 590 QGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGK---------------I 634
++ N+ GA LAV RGK I
Sbjct: 646 HSTEI-----------------------NSKCTGALLLAVYRGKISEGIDFSDNSARAVI 682
Query: 635 VVGIPFPNINDIQVSLKKKYNDTYRSSK-------NLLSGNEWYCNQAFRALNQAIGRCI 687
VGIPFPN+ +IQV LKK+YN+T + +L+SG+EW QA+RALNQA+GRC+
Sbjct: 683 AVGIPFPNLKNIQVQLKKQYNNTRLKNAVGLGVQHSLISGDEWLEIQAYRALNQALGRCL 742
Query: 688 RHRFDYGAIIL 698
RH+ D+GA++L
Sbjct: 743 RHKMDWGALLL 753
>gi|297842871|ref|XP_002889317.1| hypothetical protein ARALYDRAFT_477264 [Arabidopsis lyrata subsp.
lyrata]
gi|297335158|gb|EFH65576.1| hypothetical protein ARALYDRAFT_477264 [Arabidopsis lyrata subsp.
lyrata]
Length = 1016
Score = 346 bits (887), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 266/825 (32%), Positives = 392/825 (47%), Gaps = 127/825 (15%)
Query: 3 SEANPNPNYRKPLNAYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESP 62
SEA PNY + GI V+FP++ Y SQ+++M RVI +L CHALLESP
Sbjct: 28 SEAKIMPNY-------SIRGINVDFPFEAYQSQIIYMDRVIESLQ-----NKCHALLESP 75
Query: 63 TGTGKSLSLLCSTLAWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPP 122
TGTGK+L LLC+TLAW+++ L + S K D + + P ++ + +S +
Sbjct: 76 TGTGKTLCLLCATLAWRKS------LGSFSTRK-DRKNCSIPWSDSDDLMSQSGGAF--- 125
Query: 123 STNGQTAQVAMNNKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYC 182
PTI YASRTHSQ+ QVI E K+ +YR M VL SR+ C
Sbjct: 126 ---------------------PTIIYASRTHSQLRQVIKELKRCSYRPKMVVLGSREQLC 164
Query: 183 TNKYVRD--KENIDEECKLLLGDRN-LGCPQFKNVHKVRGHPSLQKGGCH---EVHDIED 236
N+ V + + C+ L R C F + P K H E DIED
Sbjct: 165 VNEEVNSLRGKALTNACQYLCKKRGKRQCNHFNRI------PDYLKHNTHIGDEPLDIED 218
Query: 237 LVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIE 296
LVN+G+ C YY R + D ++F PY+Y+I+ R ++V+ ++LI DEAHN+E
Sbjct: 219 LVNIGKDSGPCPYYITRELHKDVDIIFAPYNYLISNGYRKFLKVNWNNSVLIFDEAHNLE 278
Query: 297 DIARDAGSVDIDEDVLLKLQMELEQVC--------------SVNP---MIYQPLIEMTQD 339
+ D+ S D+ VLL + Q C S+NP I + L+ Q+
Sbjct: 279 SLCADSASFDL-PSVLLSACISEAQECVQLAAARRNSLNDVSINPENFAILKGLLLKLQE 337
Query: 340 LVGWIERRKATLAKREFQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDT 399
L+ K + KR+ + F G L+ NI+ + P L+ +A A
Sbjct: 338 LIS-----KVPIPKRD-EGFTK--PGPYIYEMLKSLNITHETAPKLIGTVEEA---AVFL 386
Query: 400 ESELPHLSGMSVITLEGLFSSLTYFFSRNGS-HVSDYQLALQKYIKRDSKNPGGNWTHTL 458
E E + + LE + L F NGS H Y++ +Q+ + + G + TL
Sbjct: 387 EEEKQRTATNAGSKLEIIADMLKLIFRENGSNHADVYRVHVQELEQNSTDVMKGKVSRTL 446
Query: 459 SLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVL 517
S WC +P + D+A+ + SIILTSGTLSPM+S + EL + F LE PHVI + Q+
Sbjct: 447 SWWCFSPGITMLDIAKKGVGSIILTSGTLSPMDSLAQELKLDFPVRLENPHVISSN-QLW 505
Query: 518 TSVISTGPDNYPLNASYKTADGYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDF 577
V+STGP Y LN+SY+ D + ++L N +SR+ + L P S
Sbjct: 506 AGVVSTGPSGYVLNSSYRNRDVPEYKQELGN---AIVNFSRVVPEGLLIFFP---SYYLM 559
Query: 578 EIVLKHYYNSISQGSKCAVVR----KKRVKREGNNDLNTIESQENANK------KGASFL 627
+ + + N + S R KK V ++ L Q+ + K G F
Sbjct: 560 DSCISFWKNGCHRNSMTVWERICKLKKPVIEPKDSSLFPAAMQDFSEKLQDRSTSGVVFF 619
Query: 628 AVCRGK---------------IVVGIPFPNINDIQVSLKKKY-------NDTYRSSKNLL 665
AVCRGK ++ G+P+ + D +V LK+++ D LL
Sbjct: 620 AVCRGKVSEGLDFADGAGRAVVITGLPYARVTDPRVILKREFLDEQSQLADVKLPRSTLL 679
Query: 666 SGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDS 725
SG+ WY +A RA+NQAIGR IRHR DYGAII D+RF++ ++ IS W+R ++K Y
Sbjct: 680 SGSMWYSQEAARAVNQAIGRVIRHRHDYGAIIFCDDRFEQPSQQSKISLWIRPNVKCYSR 739
Query: 726 FDASLEGLKSFFRDVKGWVGKKMFNGLENSDNDVDHVSSMDQCKE 770
+ + L FFR + ++ EN N V + M+ K+
Sbjct: 740 YGEVISDLARFFRTERSNFPARLVTDQEN--NIVSTLVPMESTKD 782
>gi|350407679|ref|XP_003488158.1| PREDICTED: Fanconi anemia group J protein-like [Bombus impatiens]
Length = 959
Score = 345 bits (886), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 255/810 (31%), Positives = 382/810 (47%), Gaps = 129/810 (15%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ GI+V+ P +PY Q+ M ++I + + + LLESPTG+GK+L+LLC LAW
Sbjct: 205 ISGIKVKLPVKPYSCQVAVMNQLIQGCIKQE-----NCLLESPTGSGKTLALLCGVLAWH 259
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPS--TIPPSTNGQTAQVAMNNKN 137
H D ++ T N G +PES + T + + +
Sbjct: 260 ------------DHHVGDCKSTTSH-ENNGEDLPESSSTKCTDYCEDYDEEEDFEDSYEK 306
Query: 138 VKKKMTPTIFYASRTHSQISQVISEYKKTAYR-VPMAVLASRKHYCTNKYVRDKENIDEE 196
KK IFY +RTH QI QV+ E +KT+Y+ M +L+SR+H C + ++K E
Sbjct: 307 SKKIKISKIFYGTRTHKQIEQVVRELRKTSYKHKKMTILSSREHTCIQETTKNK---TEL 363
Query: 197 CKLLLGDRN-LGCPQF-----KNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYY 250
C LL +N GCP + K + RG ++ G ++ DIEDLV +G+ C Y+
Sbjct: 364 CNDLLDTQNHKGCPFYNESNKKTIATFRG---VKSRGLDDIWDIEDLVAIGKNEGLCPYF 420
Query: 251 AARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDED 310
AARS+A+ A ++FCPY+YI++P IR +M++D+ G ++ILDEAHNIEDI R+ SV ED
Sbjct: 421 AARSLAEHADIIFCPYNYIVDPDIRESMQLDVTGHVIILDEAHNIEDICREVASVSFRED 480
Query: 311 VLLKLQMELEQVC---SVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFS-CWTGD 366
L + E E + + + IY L + LV +++ + S WTG
Sbjct: 481 HLTAVASECESLMKQRAADSEIYGTLQTYSLKLVDFLKITVVDKVGYNSDNLSSPYWTGA 540
Query: 367 KALRELQEANISRQCFPILLECATKAIKEATDTESEL--------PHLSGMSVITLEGLF 418
+ L ++ + + L AI ++ + E P +S + +E L
Sbjct: 541 ELLELFNMNGLNEAMYTMFLGACNAAIADSNRAKEERRTFQKVLQPVISPTTKKLIEQLM 600
Query: 419 SSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGN-W---------THTLSLWCLNPAVV 468
++ S +++D++ + + +D K N W TL L C+NP V
Sbjct: 601 FTIRMITS--SEYMNDFRACVTETTVKDFKYATENTWLSSKVCTQRARTLKLLCMNPGVT 658
Query: 469 FKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNY 528
F +A + SIIL SGTLSP SF SELG F L HVI + QV + GP+
Sbjct: 659 FAPLARQARSIILASGTLSPTASFQSELGTSFAHVLNTGHVIPKE-QVYAICVPQGPNEV 717
Query: 529 PLNASYKTADG----------------------------YKLMEKLCNRWRETGQWSRLN 560
L A+Y++ + Y +M RW W+++
Sbjct: 718 KLRANYQSVNSWAFQDELGAVLLDVCESVPHGILCFFSSYNVMHTQMQRWISNSIWTKIT 777
Query: 561 AKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENAN 620
+ K +F+EP+ G D + ++ Y I Q S KR G
Sbjct: 778 SVKQIFIEPRYGG--DLKDIMYEYRQVIEQTSG---------KRRGK------------- 813
Query: 621 KKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKKYNDTYRSSKNLL 665
GA FLAV RGK I VGIP+ D + +K YNDT K LL
Sbjct: 814 ITGALFLAVFRGKVAEGIDFKDNEARCVITVGIPYAVRKDPVIDMKLSYNDT-NVKKGLL 872
Query: 666 SGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDS 725
G+EWY QAFRALNQA+GRC+RH D+GA++L+DERF N+ ++ KW++ +
Sbjct: 873 KGSEWYSIQAFRALNQALGRCLRHINDWGAVLLVDERFLMHENKENLPKWVKTMWVNQNG 932
Query: 726 FDASLEGLKSFFRDVKGWVGKKMFNGLENS 755
++ E LK F K K++ G+ NS
Sbjct: 933 YNLR-ENLKDFVSKQKAREEKQL--GITNS 959
>gi|12324581|gb|AAG52242.1|AC011717_10 hypothetical protein; 30600-24965 [Arabidopsis thaliana]
Length = 959
Score = 343 bits (880), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 255/790 (32%), Positives = 380/790 (48%), Gaps = 110/790 (13%)
Query: 18 YHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLA 77
Y + GI VEFP++ Y SQ+++M RVI +L CHALLESPTGTGK+L LLC+TLA
Sbjct: 49 YSIRGINVEFPFEAYQSQIIYMDRVIESLQ-----NKCHALLESPTGTGKTLCLLCATLA 103
Query: 78 WQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKN 137
W+++ L + S K + + S IP S + + +
Sbjct: 104 WRKS------LGSFSTRK------------------DRKNSAIPWSDSDEPLS---QSGG 136
Query: 138 VKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRD--KENIDE 195
PTI YASRTHSQ+ QVI E K+++YR M VL SR+ C N+ V + +
Sbjct: 137 GGGGAFPTIVYASRTHSQLRQVIKELKRSSYRPKMVVLGSREQLCVNEEVNSLRGKALTN 196
Query: 196 ECKLLLGDRN-LGCPQFKNVHKVRGHPSLQKGGCH---EVHDIEDLVNVGQVVRGCSYYA 251
C+ L R C F + P K H E DIEDLVN+G+ C YY
Sbjct: 197 ACQYLCKKRGKRQCNHFNRL------PDYLKHNPHIGDEPVDIEDLVNIGKDSGPCPYYI 250
Query: 252 ARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDV 311
R + D ++F PY+Y+I+ R ++V+ ++LI DEAHN+E + D+ S D+ V
Sbjct: 251 TRELHKDVDIIFAPYNYLISNGYRKFLKVNWTNSVLIFDEAHNLESLCADSASFDL-PSV 309
Query: 312 LLKLQMELEQVC--------------SVNP---MIYQPLIEMTQDLVGWIERRKATLAKR 354
LL + Q C S+NP I + L+ Q+L+ K + KR
Sbjct: 310 LLSACISEAQECVQLAAARRDSLNDVSINPENFAILKGLLLKLQELIS-----KVPIPKR 364
Query: 355 EFQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVITL 414
+ + F G L+ NI+ + P L+ +A A E E + + L
Sbjct: 365 D-EGFTK--PGPYIYEMLKSLNITHETAPKLIGTVEEA---AVFLEEEKQRTATNAGSKL 418
Query: 415 EGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAE 474
E + L F NGS+ +D L++ K G + TLS WC +P + D+A+
Sbjct: 419 EIIADMLKLIFRENGSNHADVYRELEQNSTDVMK---GKVSRTLSWWCFSPGITMLDIAQ 475
Query: 475 LSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNAS 533
+ SIILTSGTLSPM+S + EL + F LE PHVI + Q+ V+STGP Y LN+S
Sbjct: 476 KGVGSIILTSGTLSPMDSLAQELKLDFPIRLENPHVISSN-QLWAGVVSTGPSGYVLNSS 534
Query: 534 YKTADGYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKH--YYNSISQG 591
Y+ D + ++L N +SR+ + L P + K+ Y NS++
Sbjct: 535 YRNRDVPEYKQELGN---AIVNFSRVVPEGLLIFFPSYYLMDSCITFWKNGCYRNSMTVW 591
Query: 592 SKCAVVRKKRVKREGNNDLNTI-----ESQENANKKGASFLAVCRGK------------- 633
+ ++K ++ + ++ E ++ G F AVCRGK
Sbjct: 592 ERICKLKKPVIEPKDSSLFPAAMRDFSEKLQDRATSGVVFFAVCRGKVSEGLDFADGAGR 651
Query: 634 --IVVGIPFPNINDIQVSLKKKY-------NDTYRSSKNLLSGNEWYCNQAFRALNQAIG 684
++ G+P+ + D +V LK+++ D LLSG+ WY +A RA+NQAIG
Sbjct: 652 AVVITGLPYARVTDPRVKLKREFLDEQSQLADVKLPRSTLLSGSMWYSQEAARAVNQAIG 711
Query: 685 RCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFRDVKGWV 744
R IRHR DYGAII D+RF++ ++ IS W+R ++K Y + + L FFR +
Sbjct: 712 RVIRHRHDYGAIIFCDDRFEQPSQQSKISLWIRPNVKCYSRYGEVISDLARFFRTERSNF 771
Query: 745 GKKMFNGLEN 754
++ EN
Sbjct: 772 PARLVTEQEN 781
>gi|340717629|ref|XP_003397282.1| PREDICTED: Fanconi anemia group J protein homolog [Bombus
terrestris]
Length = 976
Score = 342 bits (878), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 256/817 (31%), Positives = 382/817 (46%), Gaps = 126/817 (15%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ GI+V+ P +PY Q+ M ++I + + + LLESPTG+GK+L+LLC LAW
Sbjct: 205 ISGIKVKLPVKPYSCQVAVMNQLIQGCIKQE-----NCLLESPTGSGKTLALLCGVLAWH 259
Query: 80 -------QNCKLKNQL-ANISHSKPDTEAVTDPLANGGGFIPESQPS-TIPPSTNGQTAQ 130
QN KL+ Q+ +IS D ++ T NG S T +
Sbjct: 260 DHHVAEVQNQKLEKQIQEDISR---DCKSTTSHENNGEDLAESSNTKCTDYCEDYDEEED 316
Query: 131 VAMNNKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYR-VPMAVLASRKHYCTNKYVRD 189
+ + KK IFY +RTH QI QV+ E +KT+YR M +L+SR+H C + ++
Sbjct: 317 FEDSYEKSKKIKISKIFYGTRTHKQIEQVVRELRKTSYRHKKMTILSSREHTCIQETTKN 376
Query: 190 KENIDEECKLLLGDRN-LGCPQF-----KNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQV 243
K E C LL +N GCP + K + RG S G ++ DIEDLV +G+
Sbjct: 377 K---TELCNDLLDTQNHKGCPFYNESNKKIIATFRGAKS---RGLDDIWDIEDLVAIGKN 430
Query: 244 VRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAG 303
C Y+AARS+ + A ++FCPY+YI++P IR +M++D+ G ++ILDEAHNIEDI R+
Sbjct: 431 EGLCPYFAARSLMEHADIIFCPYNYIVDPDIRESMQLDVAGHVIILDEAHNIEDICREVA 490
Query: 304 SVDIDEDVLLKLQMELEQVC---SVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFF 360
SV ED L + E E + + + IY L + LV +++ +
Sbjct: 491 SVSFREDHLTAVATECESLMKQRAADSEIYGTLQTYSLKLVNFLKTTVVDKVGYNSDNLS 550
Query: 361 S-CWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESEL--------PHLSGMSV 411
S WTG + L ++ + L AI ++ + E P +S +
Sbjct: 551 SPYWTGAELLELFNMNGLNEAMYTSFLGACNAAIADSNRAKEERRIFQKVLQPVISPTTK 610
Query: 412 ITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGN-W---------THTLSLW 461
+E L ++ S +++D++ + + +D K N W TL L
Sbjct: 611 KLIEQLMFTIRMITS--SEYMNDFRACITETTVKDFKYATENTWLSSKVCTQRVRTLKLL 668
Query: 462 CLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVI 521
C+NP V F +A + SIIL SGTLSP SF SELG F L HVI + QV I
Sbjct: 669 CMNPGVTFAPLARQARSIILASGTLSPTASFQSELGTSFAHVLNTGHVIPKE-QVYAICI 727
Query: 522 STGPDNYPLNASYKTADG----------------------------YKLMEKLCNRWRET 553
GP+ L A+Y++ + Y +M RW
Sbjct: 728 PQGPNEVKLRANYQSVNSWAFQDELGAVLLDVCESVPHGILCFFSSYNVMHTQMQRWINN 787
Query: 554 GQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTI 613
W+++ + K +F+EP+ G D + ++ Y I Q S
Sbjct: 788 SIWTKITSVKQIFIEPRHGG--DLKDIMYEYRQVIEQTS--------------------- 824
Query: 614 ESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKKYNDTY 658
++ GA FLAV RGK I VGIP+ D + +K YND
Sbjct: 825 -DKQRGKITGALFLAVFRGKVAEGIDFKDNEARCVITVGIPYAVRKDPVIDMKLSYNDM- 882
Query: 659 RSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRK 718
+ LL G+EWY QAFRALNQA+GRC+RH D+GA++L+DERF N+ ++ KW++
Sbjct: 883 NVKRGLLKGSEWYSIQAFRALNQALGRCLRHINDWGAVLLVDERFLMHENKENLPKWVKT 942
Query: 719 SIKQYDSFDASLEGLKSFFRDVKGWVGKKMFNGLENS 755
+ ++ E LK F K K++ G+ NS
Sbjct: 943 MWVNQNGYNLR-ENLKDFVSKQKAREEKQL--GITNS 976
>gi|383856223|ref|XP_003703609.1| PREDICTED: Fanconi anemia group J protein-like [Megachile
rotundata]
Length = 935
Score = 342 bits (878), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 248/772 (32%), Positives = 364/772 (47%), Gaps = 134/772 (17%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ GI+V+FP +PY Q+ M +VI +++ + LLESPTGTGK+L+LLCS LAW
Sbjct: 197 ISGIKVKFPAKPYSCQMAVMNKVIQGCVKSE-----NCLLESPTGTGKTLALLCSVLAWH 251
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLAN--GGGFIPESQPSTIPPSTNGQTAQVAMNNKN 137
+ HS D + D N G G + + + ++
Sbjct: 252 DH-----------HS--DVNPIDDGDFNDCGAGVLYTCEAY--------DEEYLKKFDEP 290
Query: 138 VKKKMTPTIFYASRTHSQISQVISEYKKTAYR-VPMAVLASRKHYCTNKYVRDKENIDEE 196
K+ P I+Y +RTH QI QV E +KTAY+ M +L+SR+H C + R+K E
Sbjct: 291 TKRSKIPKIYYGTRTHKQIQQVTRELRKTAYKQKKMTILSSREHTCIQESNRNKT---EL 347
Query: 197 CKLLL----GDRNLGCPQFKNVHK--VRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYY 250
C LL G R CP + +K + SL+ G + DIEDLV +G+ C Y+
Sbjct: 348 CNDLLDPLKGKR---CPFYNESNKKSINSFTSLEIRGVNSAWDIEDLVAIGKEEGICPYF 404
Query: 251 AARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDED 310
AAR++ + A ++FCPY+YII+P IR +M++D+K ++ILDEAHNIEDI R+ SV ED
Sbjct: 405 AARNLMEFADIIFCPYNYIIDPDIRESMQIDLKDEVVILDEAHNIEDICREVASVAFRED 464
Query: 311 VLLKLQMELEQVCSVNP---MIYQPLIEMTQDLVGWIERRKATLAKREFQHFFS-CWTGD 366
L+ + E E + Y + LV +++ + S WTG
Sbjct: 465 QLVVVATECEALTKQREDDFATYNTIKVYVLKLVKFMKTISLDIVDNITDTSSSPYWTGA 524
Query: 367 KALRELQEANISRQCFPILLECATKAIKEATDTESE--------LPHLSGMSVITLEGLF 418
+ L N+ + L A+ + + + E P +S + TL L
Sbjct: 525 ELLELFNMHNLGESVYKEFLAACNAAMADVNNMKEESRMHQKNLKPIISPSTQTTLGHLG 584
Query: 419 SSLTYFFSRNGSHVSDYQLALQ-------KYIKRDSKNPGGNWTH---TLSLWCLNPAVV 468
S+ + +V+DY+ + K++ D+ H TL L C+NP V+
Sbjct: 585 FSMRMITT--PQYVNDYRACVIENTVKDFKFLAEDTWQTFKKQEHRARTLKLICMNPGVI 642
Query: 469 FKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNY 528
F+ ++ IIL SGTL+P S+ SEL F L A HVI + QV + IS GP+
Sbjct: 643 FEPLSRSVRCIILASGTLTPTASYQSELNTTFSHILNAGHVIPKE-QVYATCISKGPNGI 701
Query: 529 PLNASYKTAD----------------------------GYKLMEKLCNRWRETGQWSRLN 560
L A+Y+T + Y +M K RW+ T W+ ++
Sbjct: 702 QLRANYQTVNSWGFQDELGLVLLRICESIPHGVLCFFSSYNVMYKQTERWKHTSTWNEIS 761
Query: 561 AKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENAN 620
K +FVEP+ GS+ E ++ Y I S +
Sbjct: 762 RIKRVFVEPRHGSE--LEFIMNEYREVIENTSAGPI----------------------GK 797
Query: 621 KKGASFLAVCRGKIV---------------VGIPFPNINDIQVSLKKKYNDTYRSSKNLL 665
G FLAV RGK+ VGIPFP D + +K KYND ++K LL
Sbjct: 798 INGGLFLAVYRGKVAEGIDFKDNEARCVVCVGIPFPVRKDPVIDMKFKYNDA-NTAKGLL 856
Query: 666 SGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLR 717
G EWY QAFRALNQA+GRC+RH D+GA+IL+DERF +A++ KW++
Sbjct: 857 RGTEWYSIQAFRALNQALGRCLRHINDWGAVILVDERFLLPEYKANLPKWVK 908
>gi|301094332|ref|XP_002896272.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262109667|gb|EEY67719.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 988
Score = 342 bits (876), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 223/710 (31%), Positives = 342/710 (48%), Gaps = 135/710 (19%)
Query: 131 VAMNNKNVKKKMTPTIFYASRTHSQISQVISEYKK--TAY------------RVPMAVLA 176
VA + K+ + P IF+ SRTHSQ++QV+ E K +Y ++ VL
Sbjct: 217 VAPDQPKKKRVVPPQIFFCSRTHSQLAQVVDELKNCPVSYLDSPEDSNTYTKQLQTCVLG 276
Query: 177 SRKHYCTNKYV-RDKENIDEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIE 235
S+++ C N+ V RD +DE+C+L L C F+ K K V DIE
Sbjct: 277 SKRNMCVNRKVNRDPSQVDEKCRLAL--EGSSCSFFRKRKKTNDL----KRSVPPVWDIE 330
Query: 236 DLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNI 295
DLV + Q R C+Y+ AR D A +VF PY+Y+++P IRGA+ + +K AI++LDEAHN+
Sbjct: 331 DLVKLAQKHRECAYFHAREALDHANIVFAPYNYLLDPTIRGAVGITLKDAIIVLDEAHNV 390
Query: 296 EDIARDAGSVDIDEDVLLKLQMELEQVCSVN--PMIYQPLIEMTQDLVGWIE----RRKA 349
ED R + SV++ D L V P Y L+++ + W++ A
Sbjct: 391 EDTCRSSASVEVTTDALAASIKAFTIVIKHGNRPKTYNALLKLLNGINRWLQSVDSNANA 450
Query: 350 TLAKREFQHFFSCWTGDKALRELQE-ANISRQCFPILLECATKAIKEATDTESELPH--- 405
L ++ W G AL L E + +++ LE + ++E + E+ L +
Sbjct: 451 ILQPSGYEEKSKVWDGADALAMLAEYSGLTKDN----LEEMKENVQEVREYENGLGNSAE 506
Query: 406 -----------------------LSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQK- 441
L +++ T+E + + + Y F + D++L + K
Sbjct: 507 SSQQPPTQAAQDAAANPTGASVLLGALALATVESIMNVVDYMFRDRLKFIEDFKLVVIKS 566
Query: 442 ---------YIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSF 492
+ +N G W + +WCLN AV F D+A + S+ILTSGTLSPM SF
Sbjct: 567 KSTWKENASFRSPTKRNGGDEWELKMCIWCLNAAVAFSDIASQARSVILTSGTLSPMESF 626
Query: 493 SSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTAD-------------- 538
+ ELGV F LEA HV+++ QV + GP N L ++Y
Sbjct: 627 AGELGVDFPIRLEANHVVNMRKQVFIGAVMHGPGNVDLQSTYNNQQDPRYQDSMGQLLLQ 686
Query: 539 --------------GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHY 584
Y L+ KL RW++T W + K ++ EP+ + DF+ +L+ Y
Sbjct: 687 YSQAIPGGILMFFPSYSLLNKLTTRWKKTKLWGEIEQFKAIYSEPRNAGK-DFDRLLEDY 745
Query: 585 YNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKI---------- 634
+I+ C+ ++G+ + NK GA FLAV RGK+
Sbjct: 746 KETIT----CS--------KDGD----------DGNKTGAVFLAVYRGKVSEGIDFSNDN 783
Query: 635 -----VVGIPFPNINDIQVSLKKKYNDTY-RSSKNLLSGNEWYCNQAFRALNQAIGRCIR 688
VGIPFP++ ++QVSLK+KY D R + L++G+ WY QAFRALNQA+GRCIR
Sbjct: 784 ARAVLCVGIPFPSVKELQVSLKRKYQDEKSRMNMKLVNGHIWYNLQAFRALNQALGRCIR 843
Query: 689 HRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
HR DYGAI+LLD R + ++ +SKW+R I++++ + FF+
Sbjct: 844 HRQDYGAIMLLDSRHRFNKHTKSLSKWMRPYIQEFEHSQMCVPMFSDFFQ 893
Score = 60.8 bits (146), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 44/67 (65%), Gaps = 7/67 (10%)
Query: 16 NAYHVGGIQVEFPY--QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLC 73
N + + G VEFP +P+ +Q M +V++ L Q HALLESPTG+GK+L+LLC
Sbjct: 7 NRFMIMGYNVEFPQGKRPFPAQFAVMNKVLTALKTEQ-----HALLESPTGSGKTLALLC 61
Query: 74 STLAWQQ 80
S+L +Q+
Sbjct: 62 SSLTFQK 68
>gi|328871465|gb|EGG19835.1| DEAD/DEAH box helicase [Dictyostelium fasciculatum]
Length = 1125
Score = 339 bits (869), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 222/689 (32%), Positives = 342/689 (49%), Gaps = 108/689 (15%)
Query: 122 PSTNGQTAQVAMNNKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHY 181
P+TN T + K + P IF+ SRTHSQI+Q+ SE KT YR M VLASR HY
Sbjct: 281 PTTNVSTPDLLEKAKE-EVASVPKIFFCSRTHSQIAQLTSELLKTPYRPRMCVLASRDHY 339
Query: 182 CTNKYVRDKENIDEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVG 241
C N + + ++C+ + +RN + + + P GG EV IED ++ G
Sbjct: 340 CINPKLAGYDRKKDKCRKVRKERNCRFERRTKQYSLSQIPKFLPGGEKEVWSIEDFIDGG 399
Query: 242 QVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARD 301
+ + C YYA++ + A L+FCPY+YII P IR + +I+I DEAHNIED
Sbjct: 400 KDLGECPYYASKGFIEHANLIFCPYNYIIEPSIRKIFKEHFDNSIIIFDEAHNIEDSLMS 459
Query: 302 AGSVDIDEDVL----------LKLQMELEQVC--SVNPMIYQPLIEMTQDLVGWIERRKA 349
A S ++ ++ + + M ++Q M+Y L + + W+ R +
Sbjct: 460 AASFELTKEEVNESTTQCKDTMSNSMIMDQATPNEKETMLY--LYSLFDKMGTWMSRNEK 517
Query: 350 TLAKREFQHFFSCWTGDKALRELQ-EANISRQCFPILLECATKAIKEATD----TESELP 404
L +++++ + W+G K L L+ + ++ + L E + K+ T+ +E P
Sbjct: 518 VLTDQDYKNQNNVWSGRKILEVLEKDFGLTAANYRKLRESLDRLEKDDTEGGGTVSAETP 577
Query: 405 HLSGMSVITLE------------------------GLFSSLTY---FFSRNGSHVSDYQL 437
+ G + E G+ ++L F N +SD+++
Sbjct: 578 NKPGEKGLADEHQSKTKQRVKMEKRDNELLSPKILGILANLAQVYDFVFGNLQFISDFRM 637
Query: 438 ALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELG 497
Q+ +WC+NP FK + E + +IILTSGTL+P+NSF+SEL
Sbjct: 638 FFQR-------------QEVYGIWCMNPRSAFKSIREKARTIILTSGTLAPLNSFASELS 684
Query: 498 VQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTAD------------------- 538
F E ++ D+ +V + G +N ++ ++K ++
Sbjct: 685 SPFPVTAELGNLGDITKRVWIGTLGVGTNNTKMDCTFKGSENLQFQDALGDAILKHLQVV 744
Query: 539 ---------GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSIS 589
Y MEK+ NRW TG +++++ KP+F EPK +DF+ VL+ Y +++
Sbjct: 745 PNGVLVFFPSYAFMEKIKNRWEMTGMYNKIDQCKPIFFEPK--QTKDFKRVLEGYNDAVK 802
Query: 590 QGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVS 649
G+ V + +V EG N S E A RG I+VGIP PNI D++V
Sbjct: 803 TGATLFSVCRGKVS-EGIN-----FSDEYA-----------RGVIIVGIPLPNIKDLRVD 845
Query: 650 LKKKYNDTYRS-SKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERN 708
LKKKYND+ S +NL++GNEWY Q +RALNQAIGRCIRH+ DYG+I+L+D RF +E
Sbjct: 846 LKKKYNDSNCSIIQNLINGNEWYTLQGYRALNQAIGRCIRHKDDYGSILLIDSRFTQESV 905
Query: 709 RAHISKWLRKSIKQYDSFDASLEGLKSFF 737
++S+W R IK +S D SL LKSFF
Sbjct: 906 WRNLSRWARMCIKNNNSIDRSLPSLKSFF 934
Score = 71.2 bits (173), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 50/76 (65%), Gaps = 6/76 (7%)
Query: 17 AYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
Y + G ++FPY+PY +Q M R++ ++ Q +ALLES TGTGK+LSLLC+TL
Sbjct: 109 TYKINGHNIKFPYEPYDTQATMMHRILEACEKGQ-----NALLESATGTGKTLSLLCATL 163
Query: 77 AWQQNCKLKNQLANIS 92
WQ+ KL + +NI+
Sbjct: 164 EWQKG-KLAERDSNIN 178
>gi|380021224|ref|XP_003694471.1| PREDICTED: Fanconi anemia group J protein homolog, partial [Apis
florea]
Length = 878
Score = 338 bits (866), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 235/775 (30%), Positives = 374/775 (48%), Gaps = 140/775 (18%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ GI+V+ P +PY Q+ M ++I + + + LLESPTG+GK+L+LLC LAW
Sbjct: 154 ISGIKVKLPVKPYSCQIAVMNKLIQGCVKGE-----NCLLESPTGSGKTLALLCGVLAWH 208
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNG-QTAQVAMNNKNV 138
H + + T N ES + S + + + + +
Sbjct: 209 D------------HYIGEGKQTTSCENNEKDCCQESSKKCMLDSDDSYEDYEDLLEDAKG 256
Query: 139 KKKMTPTIFYASRTHSQISQVISEYKKTAYR-VPMAVLASRKHYCTNKYVRDKENIDEEC 197
KK P IFY +RTH QI QV+ E +KT Y+ M +L+SR++ C ++K + E
Sbjct: 257 KKLKVPRIFYGTRTHKQIEQVVKELRKTCYKHKKMTILSSREYTCIQNTTKNKTELCNE- 315
Query: 198 KLLLGDRNLGCPQFKNVHK--VRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSM 255
LL ++ GCP + +K + +L++ G + DIEDLV++G+ C Y+AAR++
Sbjct: 316 -LLDTAKHKGCPYYNETNKKTIGTFWALERFGLRPIWDIEDLVDIGKEKESCPYFAARTL 374
Query: 256 ADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKL 315
D A ++FCPY+YII+P IR ++++D+K ++ILDEAHNIEDI+RD SV ED L
Sbjct: 375 MDTADIIFCPYNYIIDPNIRESLQLDMKDQVIILDEAHNIEDISRDVSSVSFREDHLQAT 434
Query: 316 QMELEQVC---SVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQH---FFSCWTG---- 365
E E + + + Y L +++ ++ + +L K ++ + WTG
Sbjct: 435 AHECETLAKQRAEDFTTYDTLKTFLLNVMAFL--KDMSLDKVDYNNENRSSKYWTGVELS 492
Query: 366 ------DKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVITLEGLFS 419
+KA+ +L +A + + K+I + P +S + +T+E L
Sbjct: 493 MFLMACNKAISDLNKAKEDNRMY--------KSITK--------PIISSSTKMTIENLMY 536
Query: 420 SLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGN-W---------THTLSLWCLNPAVVF 469
++ S+ + +DY+ + + +D K+ N W TL L C+NP V F
Sbjct: 537 TIRMITSK--EYQNDYRACVIESTVKDFKHMSENAWISVKKCEQRVRTLKLVCMNPGVAF 594
Query: 470 KDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYP 529
+A + IIL SGTL+P SF SELG F L HVI + QV + I GP+
Sbjct: 595 SPLALNARCIILASGTLTPTASFQSELGTSFTHVLNTGHVIPKE-QVYATCIPKGPNGIL 653
Query: 530 LNASYKTADGYKLMEKL----------------------------CNRWRETGQWSRLNA 561
L A+Y+ + ++ ++L RW++ WS++ +
Sbjct: 654 LKANYQIVNTWQFQDELGQVLLDVCESIPHGILCFFSSYNVMNTQMERWKQNSIWSKITS 713
Query: 562 KKPLFVEPK-GGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENAN 620
K +F+EP+ GG D ++ Y I S ++
Sbjct: 714 VKTVFIEPRHGGGLTD---IMNEYREVIEYTS----------------------TESKGR 748
Query: 621 KKGASFLAVCRGKI---------------VVGIPFPNINDIQVSLKKKYNDTYRSSKNLL 665
GA FLAV RGK+ VGIP+ D + +K YND SK LL
Sbjct: 749 ITGALFLAVFRGKVAEGIDFRDNEARCVVTVGIPYAVRKDPVIDMKMTYNDM-NVSKGLL 807
Query: 666 SGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSI 720
G+EWY QA+RALNQA+GRC+RH D+GA++L+DERF +N+ ++ KW++ +
Sbjct: 808 RGSEWYSIQAYRALNQALGRCLRHIHDWGAVLLVDERFLVSQNKENLPKWVKSMV 862
>gi|348687642|gb|EGZ27456.1| hypothetical protein PHYSODRAFT_554000 [Phytophthora sojae]
Length = 1025
Score = 338 bits (866), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 229/717 (31%), Positives = 349/717 (48%), Gaps = 135/717 (18%)
Query: 126 GQTAQVAMNNKNVKKKMTP-TIFYASRTHSQISQVISEYKK--TAY------------RV 170
G TA V + K KK++ P I++ SRTHSQ++QV+ E K +Y ++
Sbjct: 245 GATA-VGPDGKPKKKRVVPPRIYFCSRTHSQLAQVVDELKNCPVSYLDSPEDSNTYTKQL 303
Query: 171 PMAVLASRKHYCTNKYV-RDKENIDEECKLLLGDRNLGCPQFKNVHK---VRGHPSLQKG 226
VL S+++ C N+ V RD +DE+C+L L C FK K +R H
Sbjct: 304 QTCVLGSKRNMCVNRKVNRDPSQVDEKCRLAL--EGASCSYFKKRKKANDLRRH------ 355
Query: 227 GCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAI 286
V DIEDLV + Q R C+Y+ AR D A +VF PY+Y+++P IR A+ + +K +I
Sbjct: 356 -VPPVWDIEDLVKLAQKHRECAYFHAREALDHANIVFAPYNYLLDPSIREAVGITLKDSI 414
Query: 287 LILDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQVCSVN--PMIYQPLIEMTQDLVGWI 344
++LDEAHN+ED R + SV++ +VL V P Y L+++ + W+
Sbjct: 415 IVLDEAHNVEDTCRSSASVEVTTEVLAASIKAFSIVIKHGNRPKSYNALLKLLNGINRWL 474
Query: 345 E----RRKATLAKREFQHFFSCWTGDKALRELQE-------------ANISR-QCFPILL 386
+ A L ++ W G AL L E AN+ + + L
Sbjct: 475 QSVDSNANAILQPSGYEEKSKVWDGADALAMLAEYSGLTKDNLAEMKANVQEVREYENEL 534
Query: 387 ECATKAIKEATDTESELPH----------LSGMSVITLEGLFSSLTYFFSRNGSHVSDYQ 436
+ ++ ++AT +++ L +++ T++ + + Y F N + D++
Sbjct: 535 GNSAESSQQATQSKASQDAAANPTGASVLLGALALATVQSIMNVADYMFRDNLKFIDDFK 594
Query: 437 LALQK----------YIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTL 486
L + K + +N G W + +WCLN AV F D+A + S+ILTSGTL
Sbjct: 595 LVVIKSTSTWKESASFRSPTKRNGGDEWELKMCIWCLNAAVAFSDIASQARSVILTSGTL 654
Query: 487 SPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTAD-------- 538
SPM SF+ ELGV F LEA HV+++ QV + GP N L ++Y
Sbjct: 655 SPMESFAGELGVDFPIRLEANHVVNMRKQVFIGAVMHGPGNVDLQSTYNNQQDPRYQDSM 714
Query: 539 --------------------GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFE 578
Y L+ KL RW++T W + K ++ EP+ + DF+
Sbjct: 715 GQLLLQYSQAIPGGILMFFPSYSLLNKLTTRWKKTKLWGEIEQFKTVYSEPRNAGK-DFD 773
Query: 579 IVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKK-GASFLAVCRGKI--- 634
+L+ Y ++I +KC T E E +KK GA FLAV RGK+
Sbjct: 774 ALLEDYKDTI---TKC-----------------TAEGDEAQDKKSGAIFLAVYRGKVSEG 813
Query: 635 ------------VVGIPFPNINDIQVSLKKKYND-TYRSSKNLLSGNEWYCNQAFRALNQ 681
VGIPFP++ ++QVSLK+KY D R + L++G+ WY QAFRALNQ
Sbjct: 814 IDFSNDNARAVLCVGIPFPSVKELQVSLKRKYQDEKSRMNMKLVNGHVWYHLQAFRALNQ 873
Query: 682 AIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
A+GRCIRHR DYGAI+LLD R + ++ +SKW+R I++++ + FF+
Sbjct: 874 ALGRCIRHRQDYGAIMLLDSRHRFNKHTKSLSKWMRPYIQEFEHGQMCVPMFGDFFQ 930
Score = 63.5 bits (153), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 54/84 (64%), Gaps = 8/84 (9%)
Query: 16 NAYHVGGIQVEFPY--QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLC 73
NA+ + G VEFP +P+ +Q M +V++ L Q HALLESPTG+GK+L+LLC
Sbjct: 20 NAFMIMGYNVEFPRGKRPFPAQFAVMNKVLTALKTEQ-----HALLESPTGSGKTLALLC 74
Query: 74 STLAWQQNCKLKNQLANISHSKPD 97
S+L +Q+ +++++A + + D
Sbjct: 75 SSLTFQKQF-VRDKVAALKKEQED 97
>gi|328714715|ref|XP_003245432.1| PREDICTED: Fanconi anemia group J protein homolog isoform 2
[Acyrthosiphon pisum]
Length = 912
Score = 334 bits (856), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 250/782 (31%), Positives = 364/782 (46%), Gaps = 172/782 (21%)
Query: 86 NQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKKMTPT 145
N ++S S ++ D AN + E + I P Q+ N + + P
Sbjct: 158 NNSRDLSMSNDESIMTNDSSANNS-LMTEDEDEKIEP-------QIETNMPKKSRPVIPV 209
Query: 146 IFYASRTHSQISQVISEYKKTAYRVPMA-VLASRKHYC---TNKYVRD--KENIDEECKL 199
I++ +RTH QI QVI E ++T++ + VLASR+H C +N Y ++ E C+
Sbjct: 210 IYFCTRTHKQIEQVIKELQRTSFNTAKSCVLASREHTCIQDSNIYYPQISYKSKTELCRD 269
Query: 200 LLG---------------DRNLGCPQFKNVH-KVRGHPSLQKGGCHEVHDIEDLVNVGQV 243
LL DR C + N K+ + L K G V DIED+V +G
Sbjct: 270 LLDPKARRRNSIKFRRTIDR---CSYYDNGGVKISTYGQLAKFGVESVWDIEDIVRLGIS 326
Query: 244 VRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAG 303
+ C YY R + A++VFCPY+YII+PVIR M + +KG ++I+DEAHNIED R+A
Sbjct: 327 KKSCPYYGTRLLLKTAEIVFCPYNYIIDPVIRNTMNLKLKGHVIIVDEAHNIEDQCREAA 386
Query: 304 SVDIDEDVLLKLQMELEQV---CSVNPMIYQPLIEMTQDLVGWIERRKATLAKRE-FQHF 359
S+ +D+ + + + E+V CS N + Y L +L WI+++ + + +
Sbjct: 387 SLQLDQTNMNLAKADCEKVYKSCS-NSLSYSRLARYLSELSKWIDQKSNDIKTYDDYNRG 445
Query: 360 FSCWTGDKALRELQEANIS--------RQCFPILLECATKAIKEAT--DT----ESELPH 405
WTG + + I + C +L + A ++ + T DT E+EL
Sbjct: 446 VVSWTGTYTIASFDDFGIGLTAFEKFKKDCETVLADSAEESEPDDTKMDTKDNGENELVE 505
Query: 406 LSGMSVI------TLEG-----------------LFSSLTYFFS--RNGSHVSDYQLALQ 440
++ TLE L SS+ FS + + DY ++L+
Sbjct: 506 KEDSDLVEKDEDETLENRSSQDNVDAAITNATKTLLSSICSVFSLLYDEKYKFDYHVSLE 565
Query: 441 KYIK--------RDSKNPGGN---------------WTHTLSLWCLNPAVVFKDVAELSL 477
K ++ R+ K G W + +S CLNPA VF ++ +
Sbjct: 566 KIMELKKYEHKDRNMKTTGIGGWINAAAQPDDSRPVWKNVISFLCLNPAAVFGELKSTAR 625
Query: 478 SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTA 537
+IILTSGTLSPM SF SELG QF LEA HVI D Q S +S GPD LN Y+
Sbjct: 626 TIILTSGTLSPMQSFQSELGTQFPIALEAGHVIKPD-QCWVSSVSVGPDGTDLNGQYRNI 684
Query: 538 D----------------------------GYKLMEKLCNRWRETGQWSRLNAKKPLFVEP 569
+ Y LMEKL +RW+ TGQ +RL K + EP
Sbjct: 685 NTYNYQDEMGKVLWDVCAAVPHGVLCFMPSYMLMEKLYSRWQVTGQLNRLKQIKVVMCEP 744
Query: 570 KGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAV 629
+ G Q E ++ YY ++ K GA FLAV
Sbjct: 745 RRGDQ--LEELMTKYYAAVRGDEK--------------------------GPSGALFLAV 776
Query: 630 CRGKI---------------VVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQ 674
RGKI VGIPFPN D V+ KK YND + +K LL G EWY Q
Sbjct: 777 YRGKISEGLDFSDNNARAVVAVGIPFPNYKDAAVTHKKDYNDKHHKNKGLLPGWEWYQIQ 836
Query: 675 AFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLK 734
A+RALNQA+GRCIRHR D+GAI+L+D R+++ +N + +SKW+R +++ +S+ + LK
Sbjct: 837 AYRALNQALGRCIRHRNDWGAILLVDSRYEQPKNLSGLSKWIRGRVERNNSWSTIVTKLK 896
Query: 735 SF 736
+F
Sbjct: 897 NF 898
Score = 75.9 bits (185), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 51/76 (67%), Gaps = 6/76 (7%)
Query: 5 ANPNPNYRKPLNAYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTG 64
+N P+ R PL Y +GG+++E P +PY SQ+ M +VI R Q + LLESPTG
Sbjct: 2 SNAKPDDR-PLFTYTIGGVKIEMPVRPYPSQVSMMDKVIRGCQRQQ-----NCLLESPTG 55
Query: 65 TGKSLSLLCSTLAWQQ 80
+GK+L+LLCS LAWQ+
Sbjct: 56 SGKTLALLCSALAWQK 71
>gi|328714717|ref|XP_001943091.2| PREDICTED: Fanconi anemia group J protein homolog isoform 1
[Acyrthosiphon pisum]
Length = 918
Score = 333 bits (855), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 246/771 (31%), Positives = 359/771 (46%), Gaps = 171/771 (22%)
Query: 97 DTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKKMTPTIFYASRTHSQI 156
D +T+ + + E + I P Q+ N + + P I++ +RTH QI
Sbjct: 174 DESIMTNDSSANNSLMTEDEDEKIEP-------QIETNMPKKSRPVIPVIYFCTRTHKQI 226
Query: 157 SQVISEYKKTAYRVPMA-VLASRKHYC---TNKYVRD--KENIDEECKLLLG-------- 202
QVI E ++T++ + VLASR+H C +N Y ++ E C+ LL
Sbjct: 227 EQVIKELQRTSFNTAKSCVLASREHTCIQDSNIYYPQISYKSKTELCRDLLDPKARRRNS 286
Query: 203 -------DRNLGCPQFKNVH-KVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARS 254
DR C + N K+ + L K G V DIED+V +G + C YY R
Sbjct: 287 IKFRRTIDR---CSYYDNGGVKISTYGQLAKFGVESVWDIEDIVRLGISKKSCPYYGTRL 343
Query: 255 MADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLK 314
+ A++VFCPY+YII+PVIR M + +KG ++I+DEAHNIED R+A S+ +D+ +
Sbjct: 344 LLKTAEIVFCPYNYIIDPVIRNTMNLKLKGHVIIVDEAHNIEDQCREAASLQLDQTNMNL 403
Query: 315 LQMELEQV---CSVNPMIYQPLIEMTQDLVGWIERRKATLAKRE-FQHFFSCWTGDKALR 370
+ + E+V CS N + Y L +L WI+++ + + + WTG +
Sbjct: 404 AKADCEKVYKSCS-NSLSYSRLARYLSELSKWIDQKSNDIKTYDDYNRGVVSWTGTYTIA 462
Query: 371 ELQEANIS--------RQCFPILLECATKAIKEAT--DT----ESELPHLSGMSVI---- 412
+ I + C +L + A ++ + T DT E+EL ++
Sbjct: 463 SFDDFGIGLTAFEKFKKDCETVLADSAEESEPDDTKMDTKDNGENELVEKEDSDLVEKDE 522
Query: 413 --TLEG-----------------LFSSLTYFFS--RNGSHVSDYQLALQKYIK------- 444
TLE L SS+ FS + + DY ++L+K ++
Sbjct: 523 DETLENRSSQDNVDAAITNATKTLLSSICSVFSLLYDEKYKFDYHVSLEKIMELKKYEHK 582
Query: 445 -RDSKNPGGN---------------WTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSP 488
R+ K G W + +S CLNPA VF ++ + +IILTSGTLSP
Sbjct: 583 DRNMKTTGIGGWINAAAQPDDSRPVWKNVISFLCLNPAAVFGELKSTARTIILTSGTLSP 642
Query: 489 MNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTAD---------- 538
M SF SELG QF LEA HVI D Q S +S GPD LN Y+ +
Sbjct: 643 MQSFQSELGTQFPIALEAGHVIKPD-QCWVSSVSVGPDGTDLNGQYRNINTYNYQDEMGK 701
Query: 539 ------------------GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIV 580
Y LMEKL +RW+ TGQ +RL K + EP+ G Q E +
Sbjct: 702 VLWDVCAAVPHGVLCFMPSYMLMEKLYSRWQVTGQLNRLKQIKVVMCEPRRGDQ--LEEL 759
Query: 581 LKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKI------ 634
+ YY ++ K GA FLAV RGKI
Sbjct: 760 MTKYYAAVRGDEK--------------------------GPSGALFLAVYRGKISEGLDF 793
Query: 635 ---------VVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGR 685
VGIPFPN D V+ KK YND + +K LL G EWY QA+RALNQA+GR
Sbjct: 794 SDNNARAVVAVGIPFPNYKDAAVTHKKDYNDKHHKNKGLLPGWEWYQIQAYRALNQALGR 853
Query: 686 CIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSF 736
CIRHR D+GAI+L+D R+++ +N + +SKW+R +++ +S+ + LK+F
Sbjct: 854 CIRHRNDWGAILLVDSRYEQPKNLSGLSKWIRGRVERNNSWSTIVTKLKNF 904
Score = 75.9 bits (185), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 51/76 (67%), Gaps = 6/76 (7%)
Query: 5 ANPNPNYRKPLNAYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTG 64
+N P+ R PL Y +GG+++E P +PY SQ+ M +VI R Q + LLESPTG
Sbjct: 2 SNAKPDDR-PLFTYTIGGVKIEMPVRPYPSQVSMMDKVIRGCQRQQ-----NCLLESPTG 55
Query: 65 TGKSLSLLCSTLAWQQ 80
+GK+L+LLCS LAWQ+
Sbjct: 56 SGKTLALLCSALAWQK 71
>gi|356547406|ref|XP_003542103.1| PREDICTED: regulator of telomere elongation helicase 1-like
[Glycine max]
Length = 1001
Score = 332 bits (851), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 259/831 (31%), Positives = 384/831 (46%), Gaps = 160/831 (19%)
Query: 15 LNAYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCS 74
+ Y + GI V+FPY+ Y SQLV+M +VI +L C+ALLESPTGTGK+L LLC+
Sbjct: 1 MPTYKIRGIDVDFPYEAYESQLVYMDKVIQSLQEK-----CNALLESPTGTGKTLCLLCA 55
Query: 75 TLAWQQNCKLKNQLANISHSKPD-TEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAM 133
TLAW+++ L + +S D +E D +
Sbjct: 56 TLAWRKS--LGSFTTGVSMQADDKSEGKND-----------------------------V 84
Query: 134 NNKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTN---KYVRDK 190
++ + TI YASRTHSQI QVI E K+T+YR M VL SR+ C + K +R K
Sbjct: 85 SSSQSESSRFSTIVYASRTHSQIRQVIQELKRTSYRPKMVVLGSREQLCIHDEVKLLRGK 144
Query: 191 ENIDEECKLLLGDRN-LGCPQFKNVHK-VRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCS 248
+ C+LL R C FK V + ++ +P L + E DIEDLVN+G+ C
Sbjct: 145 TQTNA-CRLLCRRRGKRHCNHFKKVPEYMKDNPQLGE----EPVDIEDLVNIGRRFGPCP 199
Query: 249 YYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDID 308
YY ++ + +VF PY+Y+I+ R ++++ +ILI DEAHN+E I DA S D+
Sbjct: 200 YYLSKELHKFVDIVFAPYNYLIDRGYRKSLQLSWSNSILIFDEAHNLESICADAASFDLP 259
Query: 309 EDVLLKLQMELEQVC-------------SVNPMIYQPLIEMTQDLVGWIERRKATLAKRE 355
+L E E S NP + L + L+ +E+R A + E
Sbjct: 260 SWLLTACISEAESCIDLSIERRDKSNDKSQNPDDFAIL----RALLLKLEKRIAEVPI-E 314
Query: 356 FQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVITLE 415
+ G L + NI+ + L + A +T E S +V L+
Sbjct: 315 SKELGYTKPGPYIYELLADLNITHKTASKLRDIVAVA---STLLEEHNQQKSTGTVCRLD 371
Query: 416 GLFSSLTYFFSRNG--SHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVA 473
+ L F R+G +H Y++ L++ G + TLS WC NP + +D
Sbjct: 372 RIGEILDMVF-RDGRTAHAKYYRVHLREVEAWSGNGSKGKVSRTLSWWCFNPGIAMEDFP 430
Query: 474 ELSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNA 532
+ + SIILTSGTLSPM SF+ EL + F LE PHVI + Q+ V+ GP N+
Sbjct: 431 KYGVRSIILTSGTLSPMESFAQELKLDFPIRLENPHVITAN-QIWAGVLPVGPSGRTFNS 489
Query: 533 SYKTAD----------------------------GYKLMEKLCNRWRETGQ-----WSRL 559
SY+T D Y L++++ W+ + + W R+
Sbjct: 490 SYRTRDSPEYKQELGNAIVNLARIVPDGLLVFFPSYYLLDQIIACWKSSNENSTSIWDRI 549
Query: 560 NAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENA 619
K +EP+ S F + +K Y +++ +
Sbjct: 550 CKHKKPVIEPRDSSS--FPLSIKDYMTTLN----------------------------DT 579
Query: 620 NKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKKYNDTYRSSKN- 663
+ GA F AVCRGK ++ G+PF D +V LK++Y D +
Sbjct: 580 SASGAIFFAVCRGKVSEGLDFADHAGRAVVITGLPFATSTDPKVRLKREYLDQQSRPQGE 639
Query: 664 ------LLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLR 717
+L+G+EWY QA RA+NQA+GR IRHR+DYGAII DERF ++ +S+W++
Sbjct: 640 LFKVMPVLTGDEWYNQQASRAVNQAVGRVIRHRYDYGAIIFCDERFSHPHRQSQVSRWIQ 699
Query: 718 KSIKQYDSFDASLEGLKSFFRDVKGWVGKKMFNGLENSD-NDVDHVSSMDQ 767
IK + F + L FFRDV G G + LE + ++ + S DQ
Sbjct: 700 PHIKCFSRFGEVVFTLTRFFRDV-GTQGPTKVSMLEAKNGGNIGEIPSSDQ 749
>gi|157120352|ref|XP_001653621.1| regulator of telomere elongation helicase 1 rtel1 [Aedes aegypti]
gi|122117342|sp|Q16X92.1|RTEL1_AEDAE RecName: Full=Regulator of telomere elongation helicase 1 homolog
gi|108875002|gb|EAT39227.1| AAEL008960-PA [Aedes aegypti]
Length = 1010
Score = 332 bits (850), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 248/817 (30%), Positives = 376/817 (46%), Gaps = 152/817 (18%)
Query: 18 YHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLA 77
Y + GI V FP++PY Q +M RVI L + + +LESPTGTGK+LSLLCS+LA
Sbjct: 4 YQINGITVNFPFEPYQVQRDYMSRVIECLQNS-----TNGVLESPTGTGKTLSLLCSSLA 58
Query: 78 WQQNCKLK---NQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMN 134
W + K + N NI+ K L GG E + + A+ +
Sbjct: 59 WVLHKKAQVQANMRTNITDLKEFEMVQRKKLGGDGGSGMEELLDKLHDGCGPEGAKWGV- 117
Query: 135 NKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYR-VPMAVLASRKHYCTNKYVRDKENI 193
P I YASRTHSQ++QV+ E K T+Y + +L SR C + V +E
Sbjct: 118 ---------PKIVYASRTHSQLTQVMQEMKNTSYSFMKGVILGSRDQLCIHPEVSKEEGN 168
Query: 194 DEE---CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYY 250
+ CK + R C + V + P + + + DIEDLV VG VR C ++
Sbjct: 169 STKTNLCKAKVQSRT--CSFYSRVESCKERPEVV---SNVIMDIEDLVKVGTKVRACPFF 223
Query: 251 AARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDI-DE 309
++ + + A ++F PY+Y+++P R A ++I I+ILDEAHN+E + ++ S+ I
Sbjct: 224 LSKELIESADILFMPYNYLLDPKARKANNLEISNTIIILDEAHNVEKMCEESASMQIRST 283
Query: 310 DVLLKLQ-----MELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKR------EFQH 358
D+ L + M++ P + + T D + ++ L K F
Sbjct: 284 DIALCIDDVTSIMKVMDHSVAIPEDDETKKDFTIDDLALLKEMLLQLEKTVDSIPVMFSQ 343
Query: 359 FFSCWTGDKALRELQEANISRQCFPI---LLECATKAIKEATDTESELPHLSGMSVITLE 415
+ + G ++ANI + I LLE + I T+ + + G+ +
Sbjct: 344 GGNTFPGTYIFEIFEKANIKEGNYHIIAQLLENIIQYIATITEKNNFVRRGGGLQI---- 399
Query: 416 GLFSSLTYFFSRNGSHVSDYQLALQKYIK-----RDSKNPGGN------WTHT------- 457
L +L+ F+ +G +Y+ ++ K K + K GN WT T
Sbjct: 400 -LAEALSIIFAGSG---PEYRASIDKCYKVHIEIEEQKKTRGNVKQADGWTATKQLVPSV 455
Query: 458 ------LSLWCLNPAVVFKD-VAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVI 510
+S WC NP + + + SIILTSGTL+P+ SEL + LE PH+I
Sbjct: 456 KANAKVVSFWCFNPGFGMRQLLGRNARSIILTSGTLAPLKPLISELDIPIAVRLENPHII 515
Query: 511 DVDLQVLTSVISTGPDNYPLNASYKTAD----------------------------GYKL 542
D QV ++ GPD LN+SY D Y L
Sbjct: 516 DGS-QVCVKIVGQGPDKESLNSSYGNRDNPKYISSLGRTILSFCPIIPGGLLVFFPSYPL 574
Query: 543 MEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRV 602
+ K W+ETG W++++ KP+FVEP+G Q F + YY I+
Sbjct: 575 LNKCQEAWQETGIWAQISRTKPIFVEPRGKDQ--FLNTMSEYYQKIN------------- 619
Query: 603 KREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQ 647
+ + KGA F+AVCRGK I+ G+PFP + D +
Sbjct: 620 ---------------DPDGKGAVFMAVCRGKVSEGLDFADMNGRAVIITGLPFPPLKDAR 664
Query: 648 VSLKKKYNDTYRSSKN-LLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEE 706
V LKKKY R+ +N ++SG+EWY +A RA+NQAIGR IRH+ DYGAI+L D RF
Sbjct: 665 VILKKKYLQEVRTRENEIISGDEWYSLEAARAVNQAIGRVIRHKNDYGAILLCDNRFHNH 724
Query: 707 RNRAHISKWLRKSI--KQYDSFDASLEGLKSFFRDVK 741
R ++ +S W++K + Q+ +F + L FFR+ +
Sbjct: 725 RQKSQLSSWIQKHLNTNQHQNFGPIIGELSRFFRNAE 761
>gi|255574578|ref|XP_002528200.1| regulator of telomere elongation helicase 1 rtel1, putative
[Ricinus communis]
gi|223532412|gb|EEF34207.1| regulator of telomere elongation helicase 1 rtel1, putative
[Ricinus communis]
Length = 1049
Score = 327 bits (839), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 247/806 (30%), Positives = 366/806 (45%), Gaps = 165/806 (20%)
Query: 15 LNAYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCS 74
+ Y + GI V+FPY+ Y QLV+M +VI +L C+ALLESPTGTGK+L LLC+
Sbjct: 1 MPTYKIRGIDVDFPYEAYDCQLVYMEKVIQSLQ-----SRCNALLESPTGTGKTLCLLCA 55
Query: 75 TLAWQQNCKLKNQLANISHSKPDTEAVTDPLANG----GGFIPESQPSTIPPSTNGQTAQ 130
TLAW+++ P G G S+ PPS + TA
Sbjct: 56 TLAWRKSL--------------------GPFTTGKIERNGRTAGSKSDDTPPSPSEGTA- 94
Query: 131 VAMNNKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYV--- 187
PTI Y SRTHSQ+ QV+ E K+++YR M +L SR+ C + V
Sbjct: 95 ------------LPTIVYTSRTHSQLRQVVQELKRSSYRPKMVILGSREQLCIHDEVSLL 142
Query: 188 RDKENIDEECKLLLGDR-NLGCPQFKNVHK-VRGHPSLQKGGCHEVHDIEDLVNVGQVVR 245
R K + C + R C F V VR +P L E DIEDLV +G+
Sbjct: 143 RGKAQTNA-CHYVCKRREKRQCTHFARVSDYVRKNPHLGD----EPVDIEDLVKMGRRFG 197
Query: 246 GCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSV 305
C YY +R + ++F PY+Y+I+ R ++++D +ILI DEAHN+E + DA S
Sbjct: 198 PCPYYVSRELHKVVDILFAPYNYLIDRSYRKSLKIDWDKSILIFDEAHNLESLCADAASF 257
Query: 306 DIDEDVLLKLQMELEQVC-------------SVNPMIYQPLIEMTQDLVGWIERRKATLA 352
D+ +L E + S NP + L + ++ +E+R A +
Sbjct: 258 DLSSGLLTACISEAKSCIELSVARREDSNDKSRNPDNFAIL----KAILLKLEKRIAEVP 313
Query: 353 KREFQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVI 412
F+ G L + +I+ + L + +A A E + + + +V
Sbjct: 314 IESKDLGFT-RPGPYIYELLADLHITHETATKLTDIIEEA---ALLLEEDKQNTAKGTVC 369
Query: 413 TLEGLFSSLTYFF-SRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKD 471
LE + F ++ +H + Y++ +Q+ S + G + TLS WC NP V ++
Sbjct: 370 RLESMGDIFKIIFREKSNAHANFYRVHVQEVEASASDSLRGKASRTLSWWCFNPGVAMEE 429
Query: 472 VAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPL 530
+ + + SIILTSGTLSPM+SF+ EL + F LE PHVI Q+ V+ GP
Sbjct: 430 FSRMGVCSIILTSGTLSPMDSFAQELKLDFPIRLENPHVISSK-QIWAGVVPVGPSGRSF 488
Query: 531 NASYKTAD----------------------------GYKLMEKLCNRWR------ETGQW 556
N+SY+ D Y L+++ W+ T W
Sbjct: 489 NSSYRNRDSLEYKQELGNAIVNFARIVPDGLLVFFPSYYLLDQCIGCWKNVTHASSTTIW 548
Query: 557 SRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQ 616
R+ K VEP+ S F + ++ Y +
Sbjct: 549 ERICKHKQPVVEPRQSSL--FPLAIEDYMAKL---------------------------- 578
Query: 617 ENANKKGASFLAVCRGKI---------------VVGIPFPNINDIQVSLKKKY------- 654
++ + GA F AVCRGK+ ++G+PFP+ ND +V LK+++
Sbjct: 579 KDTSTSGAVFFAVCRGKVSEGLDFADHTGRAVMIIGMPFPSRNDPKVRLKREFLDEQLCL 638
Query: 655 -NDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHIS 713
D Y+S LL+G WY QA RA+NQA+GR IRHR DYGAII DERF +++ IS
Sbjct: 639 QRDAYKS--QLLTGESWYTQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHSNSQSQIS 696
Query: 714 KWLRKSIKQYDSFDASLEGLKSFFRD 739
W++ IK + F + L FFRD
Sbjct: 697 LWIQPHIKCHSKFGDVVFTLSRFFRD 722
>gi|339265705|ref|XP_003366015.1| fanconi anemia group J protein [Trichinella spiralis]
gi|316965098|gb|EFV49922.1| fanconi anemia group J protein [Trichinella spiralis]
Length = 824
Score = 326 bits (836), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 255/865 (29%), Positives = 404/865 (46%), Gaps = 201/865 (23%)
Query: 17 AYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
++ V G ++ FP+ PY +Q M R + TL +Q + L+ESPTGTGKSL+LLC+ L
Sbjct: 5 SFFVNGTKINFPFSPYPAQKAIMDRTLRTLKHSQ-----NCLVESPTGTGKSLALLCAAL 59
Query: 77 AWQ------QNCKLKNQLA---NISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQ 127
AWQ Q ++ QL N SH + D + L+ P + + + +
Sbjct: 60 AWQREFSSAQGSEIAMQLVPNLNESHDEVDCNS---ELSEEIFCSPNCKRKNMDKFSTNK 116
Query: 128 TAQVAMNNKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYR-VPMAVLASRKHYCTNKY 186
+ A N+ +K+ P IFYA+RTH Q+SQ++ E KKT Y+ V M ++ASR C N
Sbjct: 117 SQCSAANSAACQKRRVPKIFYATRTHKQLSQMVRELKKTEYKNVRMTIMASRDFTCLN-- 174
Query: 187 VRDKENIDEECKLLLGDRNLGCPQFKNVHKV--------------------------RGH 220
+ ++ C D+ C Q K+V ++ R H
Sbjct: 175 ----DKVNNHC-----DKAAACLQVKDVLEIFLQFLLIKNCSYYKGLQAFGQETSMLRKH 225
Query: 221 PSLQKGGCHEVH-----------DIEDLVNVGQVVRGCSYYAA-RSMADDAQLVFCPYSY 268
K ++ DIE+LV G+ + C Y+A+ +M DA L+FCPY Y
Sbjct: 226 VQSSKKRVKDIWEIIEENDDFAWDIEELVEAGRKLNFCPYFASVDNMYQDANLIFCPYGY 285
Query: 269 IINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQVCSVNPM 328
+I+PV+R + +++KG ++I DEAHN+ED + S I + L+ L + + P
Sbjct: 286 LIDPVVRSSSNINLKGQVIIFDEAHNMEDECCEKASFQITKQELVDAVEYLSSIEELVPE 345
Query: 329 IYQPL----IEMTQDLVGWIERRKAT--LAKREFQHFFSCWTGDKALRELQEANISRQCF 382
+ L E+ + ++ WI+++ + + + W+G ELQE +
Sbjct: 346 SKKSLQDNCTELVKSVIEWIDKKSVIEEMTNHSEKFYTKIWSGRAMYAELQEMKLHHD-- 403
Query: 383 PILLECATKAIKE------------ATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGS 430
KAI++ T T E H + LE L +L Y +
Sbjct: 404 --------KAIQKFDSVFKPDNSLNITGTVFEKKH-DNQPLTVLEKLILTLKYIYKDYHL 454
Query: 431 HVSD------YQLALQK-YIKRDSKNPGGNW---------THTLSLWCLNPAVV--FKDV 472
+D Y+L L+K + + N W +++ WC+NP +V F D+
Sbjct: 455 TPTDSYDCYSYKLCLKKEKLSGFTFNSAEGWLSKKRLNCFVDSINFWCMNPGIVNIFHDI 514
Query: 473 AELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNA 532
+ + S+IL SGTL+P+ ++++ELG+ F LEAPHVI D +V GP + PL A
Sbjct: 515 SSSARSVILASGTLAPLKTYANELGLPFQYLLEAPHVILPD-RVWIGATGVGPKHVPLKA 573
Query: 533 SYK---------------------TADG-------YKLMEKLCNRWRE----------TG 554
+Y+ T DG Y ++ L RW++ +
Sbjct: 574 TYQLAQSTEFQDELGRLLIEICKVTPDGVLCFLPSYTFIDCLLTRWKKVPPNCNFQVNSS 633
Query: 555 QWSRLNAKKPLFVEP-KGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTI 613
WS+LN K + VEP K GS D +++ + +I K+V + N
Sbjct: 634 LWSQLNVYKMVVVEPRKNGS--DVRLIMDRFTETIKD--------PKKVGPQCN------ 677
Query: 614 ESQENANKKGASFLAVCRGKI---------------VVGIPFPNINDIQVSLKKKYN-DT 657
GA LAV RGKI VGIP+P++ D+++ LK +YN +
Sbjct: 678 ---------GALLLAVYRGKISEGVDFADQQARAVVAVGIPYPDMEDMRIRLKIQYNNER 728
Query: 658 YRSSKN------LLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAH 711
+++K L+SGN+WY QAFRALNQA+GRC+RH+ D+GA++L+D RFQ +
Sbjct: 729 LKNAKRIAEMAPLISGNQWYQAQAFRALNQALGRCLRHKLDWGALLLVDSRFQNAEYSCN 788
Query: 712 ISKWLRKSIKQYDSFDASLEGLKSF 736
+S W+RK+++ YD FD + L++F
Sbjct: 789 LSTWIRKNLRCYDRFDQMICNLQTF 813
>gi|66807703|ref|XP_637574.1| DEAD/DEAH box helicase [Dictyostelium discoideum AX4]
gi|60465999|gb|EAL64066.1| DEAD/DEAH box helicase [Dictyostelium discoideum AX4]
Length = 1078
Score = 326 bits (835), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 224/689 (32%), Positives = 326/689 (47%), Gaps = 130/689 (18%)
Query: 140 KKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEECKL 199
KK +PTIF+ SRTHSQI Q+ E KKT YR M VLASR YC N ++D E+CK
Sbjct: 423 KKKSPTIFFCSRTHSQIKQLTGELKKTPYRPNMVVLASRDQYCINPLLKDVPKKLEKCKK 482
Query: 200 LLGDRNLGCPQFKNVHKVRGHPSLQK------GGCHEVHDIEDLVNVGQVVRGCSYYAAR 253
LL D GC +FK K SL K GG EV DIEDL+ GQ C Y+A+R
Sbjct: 483 LLLDH--GC-RFK---KTEQQTSLAKSSDFLGGGKKEVWDIEDLMEAGQAHSECPYFASR 536
Query: 254 SMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLL 313
M + A L+FCPY+Y+I+P IR + + G+I+I DEAHNIED + S D + L
Sbjct: 537 DMIEKADLIFCPYNYLIDPQIRKSFADKVAGSIVIFDEAHNIEDALMETSSFDSSLEELN 596
Query: 314 KLQMELEQVCSVNPMIYQPL-----------IEMTQDLVGWIERRKATLAKREFQHFFSC 362
+ + + C +N L ++ + ++ WI ++ TL +F+ +
Sbjct: 597 EHCYQNFKDCIMNSRTMSMLSNEKALAIHYCYKLLESIIAWINKKVQTLKPIDFEKHQNV 656
Query: 363 WTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSV----------- 411
W G+K L +E ++ + + E T G S+
Sbjct: 657 WKGEKILNIFEEFGLNETNYFSFRDHLATLFDEGDGTSDNGKEGGGGSLSFPSKGKGGIG 716
Query: 412 ---------------ITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSK-----NPG 451
+ L F +T +N + DY+L LQK + N G
Sbjct: 717 VGSNKQKIDPVPQRALVLLESFEKVTAMIYQNKGWIEDYRLVLQKASAFQTNGGKKSNQG 776
Query: 452 GNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVID 511
W + +W ++P + F + + + S++LTSGTLSP+ SF EL +F E ++ D
Sbjct: 777 TKWNYQFGIWAMSPRIAFSSLVQATRSVVLTSGTLSPLYSFPMELAAKFPISAEMGNLPD 836
Query: 512 VDLQVLTSVISTGPDNYPLNASYKTADG----------------------------YKLM 543
+ + +S G L ++ ++G Y +
Sbjct: 837 IAQRAWIGTLSHGVKGTKLICTHGPSEGLDFQDSLGETILQHIELIPSGVLCFFPSYGFL 896
Query: 544 EKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVK 603
EKL +RW ETG ++NAKK F EPK +Q +F L +Y ++ +K
Sbjct: 897 EKLLSRWDETGILKKINAKKRYFYEPK--NQREFIETLDNY--------------REEIK 940
Query: 604 REGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQV 648
+ N KGA AVCRGK IVVGIP+P++ D+++
Sbjct: 941 QRPN--------------KGAILFAVCRGKVSEGIDFSDEYARGVIVVGIPYPSLVDLRI 986
Query: 649 SLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERN 708
LKK++NDT +K +SG +WY QA+RALNQA+GRCIRH+ DYG+I+L+DERF + N
Sbjct: 987 VLKKEHNDT---NKKGISGGDWYKLQAYRALNQALGRCIRHKNDYGSILLIDERFTQMGN 1043
Query: 709 RAHISKWLRKSIKQYDSFDASLEGLKSFF 737
+SKW R IK + + SL LK F+
Sbjct: 1044 WNSLSKWTRSCIKNNRNLNTSLSSLKLFY 1072
Score = 76.6 bits (187), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 48/71 (67%), Gaps = 5/71 (7%)
Query: 17 AYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
Y +G +V+FP++PY Q M R++ LD + + +LESPTGTGK+LSLLCS+L
Sbjct: 190 VYKIGNYKVKFPFKPYACQASMMSRILEGLDSKE-----NCILESPTGTGKTLSLLCSSL 244
Query: 77 AWQQNCKLKNQ 87
AWQ+ K KNQ
Sbjct: 245 AWQEENKKKNQ 255
>gi|241638389|ref|XP_002409109.1| hypothetical protein IscW_ISCW019247 [Ixodes scapularis]
gi|215501299|gb|EEC10793.1| hypothetical protein IscW_ISCW019247 [Ixodes scapularis]
Length = 805
Score = 325 bits (833), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 198/612 (32%), Positives = 301/612 (49%), Gaps = 109/612 (17%)
Query: 172 MAVLASRKHYCTNKYVRDKENIDEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEV 231
M +L+SR+ C + + N +EECK LL D +GC N+ K + +PSL + E
Sbjct: 1 MCILSSRERTCIHPRISRSSNKNEECKELLDD--VGCRFQGNLKKGKEYPSLYESRIIEP 58
Query: 232 HDIEDLVNVGQ--------------VVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGA 277
+D+EDLV +G + C YY + M D + +VFCPY+Y+I+PVIR
Sbjct: 59 YDLEDLVRIGTRQKASALPAPNSTYSLGACPYYWSLDMVDSSDIVFCPYNYLIDPVIRKC 118
Query: 278 MEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQVCSVN--PMIYQPLIE 335
+ +++ A+++LDEAHNIEDI+R+ S+ I +D + + M+LE + + P ++ L
Sbjct: 119 LSINLDNAVVVLDEAHNIEDISREVMSLSITQDQIRDIIMDLEDMIRQDALPDLHHSLAR 178
Query: 336 MTQDLVGWIERRKATLAK-REFQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIK 394
+ + WI + L R F+ W+G+ + + + + + F +
Sbjct: 179 VMSKISVWISQHSDHLNDYRSFEQSGKVWSGNDIIALMIDIGLGPEAFESFRKTVAFVTS 238
Query: 395 EATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYI--KRDSKNPGG 452
D E P L + L+ L L +F+ N ++SD++ A+ K + +R S+ GG
Sbjct: 239 VEKDPEKYQPMLLASTSAILQNLVIILDFFYRSNMKYMSDFRAAVVKSVSKRRRSEAAGG 298
Query: 453 ----------NWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGT 502
+WTHTLS WCLNPAV D+ + S+I+ SGTLSPM SF SEL + F +
Sbjct: 299 WHTKSSAGNNSWTHTLSFWCLNPAVAMSDIKDKVHSLIVASGTLSPMESFESELDMPFKS 358
Query: 503 CLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTADGYKLMEKLCNRWRETGQWSRLNAK 562
L+A HVI PD TG W ++
Sbjct: 359 QLQAKHVIP-------------PDG------------------------NTGMWDNISEH 381
Query: 563 KPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKK 622
K +FVEP+ F+ + Y C ++ V G
Sbjct: 382 KCIFVEPQKADAASFDASMVEY---------CRYATREAVDVPGT--------------- 417
Query: 623 GASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKKYND-TYRSSKNLLS 666
GA LAVCRGK + VGIPFPN+ DIQV K+KYND +S + ++
Sbjct: 418 GALLLAVCRGKVSEGMDFADNTARAVVTVGIPFPNVKDIQVDQKRKYNDQCSKSGRPVMC 477
Query: 667 GNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEE-RNRAHISKWLRKSIKQYDS 725
GN WY QAFRALNQA+GRCIRHR D+GA+I++D+RF E R + +SKW+ + ++
Sbjct: 478 GNFWYETQAFRALNQALGRCIRHRLDWGALIVVDQRFSENGRYQKALSKWISDRFRCFNR 537
Query: 726 FDASLEGLKSFF 737
++ ++ LK+F
Sbjct: 538 YEEAMGSLKAFM 549
>gi|449486421|ref|XP_002193824.2| PREDICTED: regulator of telomere elongation helicase 1 [Taeniopygia
guttata]
Length = 1107
Score = 324 bits (831), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 252/825 (30%), Positives = 371/825 (44%), Gaps = 186/825 (22%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ GI V+FP+QPY Q +M +V+ L + + +LESPTGTGK+L LLCSTLAW+
Sbjct: 6 LNGITVDFPFQPYPCQEAYMAKVLECLQKK-----VNGILESPTGTGKTLCLLCSTLAWR 60
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVK 139
++ K I+ NG P+ P S+ G A + +V
Sbjct: 61 EHFKDTISARKIAQR-----------MNGVELFPDR-----PVSSWG----TAATDGDVP 100
Query: 140 KKMT--PTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE- 196
T P I YASRTHSQ++QVI+E K T YR + VL SR+ C N V+ +E+ +
Sbjct: 101 TYYTDIPKIIYASRTHSQLTQVINELKNTVYRPKICVLGSREQLCINPEVKRQESNHMQI 160
Query: 197 --CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARS 254
C++ + R C + NV + S +K + DIEDLV G R C YY +RS
Sbjct: 161 YMCRMKVMAR--ACHFYNNVEE----KSTEKELIESIMDIEDLVKNGNKHRACPYYLSRS 214
Query: 255 MADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDE----- 309
+ A ++F PY+Y+++ R A +D+KG ++ILDEAHN+E + ++ S D+
Sbjct: 215 LKQQADIIFMPYNYLLDSKSRKAHNLDLKGTVVILDEAHNVEKLCEESSSFDLTPYDLAS 274
Query: 310 -----DVLLK-----------------------LQMELEQVCSVNPMIYQPLIEMTQDLV 341
+V+L+ L MELE + + ++ Q +E D V
Sbjct: 275 AMEAINVVLEEQAKVVQQNEINAEFNMELASSGLNMELEDIAKIKKILLQ--LESAIDAV 332
Query: 342 GWIERRKATLAKREFQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTES 401
+E + F + EA I+ Q LLE + ++ +
Sbjct: 333 ELPANGNGV--TKEGSYIFDLFA---------EAQITLQTKSSLLESLEQILQFLSGRTG 381
Query: 402 ELPHLSGMSVIT--LEGLFS------SLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGN 453
+ SG+ ++ ++ +FS T F R +S Y + +I D+ N
Sbjct: 382 IFVNTSGLHKVSDIIQTVFSVDPPEGVTTGFLPRQA--ISKY---YKVHIHVDNSNQKKK 436
Query: 454 -----WT--------HTLSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQ 499
W TLS WC +P ++ + +IILTSGTLSP++SF+ E+ +
Sbjct: 437 QRTDLWNSSSSKRQGKTLSYWCFSPGYSMHELVRQGVRTIILTSGTLSPLSSFTMEMQIP 496
Query: 500 FGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTA---------------------- 537
F CLE PHVID Q+ +I GPD L ++Y+
Sbjct: 497 FPVCLENPHVIDKH-QLWVGIIPKGPDGTVLTSTYERRFSEDYLSSLGKTIGNLVRVVPH 555
Query: 538 ------DGYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQG 591
Y +M+K WRE R+ KP+FVEP+ ++ F V+ YY+ ++
Sbjct: 556 GMLVFFPSYPVMDKSLEYWREHDFAKRIEEVKPMFVEPR--NKGSFSEVIDAYYDKVT-- 611
Query: 592 SKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVV 636
C GA+FLAVCRGK I+
Sbjct: 612 --C------------------------PKSNGAAFLAVCRGKASEGLDFADINGRGVIIT 645
Query: 637 GIPFPNINDIQVSLKKKYNDTYRSS---KNLLSGNEWYCNQAFRALNQAIGRCIRHRFDY 693
G+PFP + +V LK ++ D R S LSG EWY QA RA+NQAIGR IRHR DY
Sbjct: 646 GLPFPPRMEPRVILKMQFLDEMRRSGAGAQYLSGREWYSQQASRAVNQAIGRVIRHRQDY 705
Query: 694 GAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
GAI L D RF R + W+R + YD+F ++ + FFR
Sbjct: 706 GAIFLCDHRFTTCDVRGKLPSWVRPYVNVYDNFGHAVRSVSVFFR 750
>gi|242057873|ref|XP_002458082.1| hypothetical protein SORBIDRAFT_03g026670 [Sorghum bicolor]
gi|241930057|gb|EES03202.1| hypothetical protein SORBIDRAFT_03g026670 [Sorghum bicolor]
Length = 759
Score = 323 bits (829), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 250/779 (32%), Positives = 380/779 (48%), Gaps = 93/779 (11%)
Query: 15 LNAYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCS 74
+ Y + G+ V+FP+ Y Q+ +M RVI +L + + +ALLESPTGTGK+L LLC+
Sbjct: 1 MPVYRIRGVDVDFPFDAYDCQITYMDRVIESLQQGK-----NALLESPTGTGKTLCLLCA 55
Query: 75 TLAWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMN 134
+LAW++ + + T L G SQPS S + + Q
Sbjct: 56 SLAWRRTF---GEFLRVGRGG--GGGGTQQLPYG------SQPSVSQQSEDSTSQQ---- 100
Query: 135 NKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYV---RDKE 191
++ P I YASRTHSQ+ QVI E K T+YR MAVL SR+ C + V R +
Sbjct: 101 ----QQSRYPVIIYASRTHSQLRQVIKELKATSYRPKMAVLGSREQMCIHNEVSKLRGRA 156
Query: 192 NIDEECKLLLGDRNLGCPQFKNVHK-VRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYY 250
+ C L R CP +V + ++ P L +E DIEDL+N+G+ C YY
Sbjct: 157 Q-NNACHFLCKKRR--CPHNNHVSEFMKNKPELG----NEPFDIEDLINIGRRKGPCPYY 209
Query: 251 AARSMADDAQLVFCPYSYIINPVIRGAME-VDIKGAILILDEAHNIEDIARDAGSVDIDE 309
+R ++ ++F PY+Y+I+P R ++ + A+LI DEAHN+E I DA S D+
Sbjct: 210 ISRELSKSVDILFAPYNYLIDPGNRRSLNGIPWDNAVLIFDEAHNLESICADAASFDLFP 269
Query: 310 DVLLKLQMELEQ---VCSVNPMI-------YQPL-IEMTQDLVGWIERRKATL--AKREF 356
+ L E + +C+ I + P + + L+ +E++ L A +E
Sbjct: 270 NNLTACIAEAHECIKLCAAKRSIEKSADKQFDPENYAILKALLMALEKKIGELLIASKEL 329
Query: 357 QHFFSCWTGDKALRELQEANISRQCFPILLEC---ATKAIKEATDTESELPHLSGMSVIT 413
+ G L E NI+ L+E A+ ++E E+ + +V
Sbjct: 330 GY---TKAGSYIYDFLSELNITSDTSKKLIETIDGASLLLEEGNSAETGRGVQAKATVSR 386
Query: 414 LEGLFSSLTYFFSRNG-SHVSDYQLALQ--KYIKRDSKNPGGNWTHTLSLWCLNPAVVFK 470
LE + L F G +H Y+ + + D+ G + TLS WC NP + +
Sbjct: 387 LESIRDMLDIIFRGGGQNHAKYYRFHVNESQQTSGDALKVLGKSSRTLSWWCFNPGLAME 446
Query: 471 DVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYP 529
+ +L + SIILTSGTLSP++S + EL ++F LE PHVI D Q+ V+ GP +
Sbjct: 447 EFLKLGVRSIILTSGTLSPLDSLAMELNLEFPVRLENPHVISSD-QIWVGVVPVGPSGHA 505
Query: 530 LNASYKTADGYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVL---KHYYN 586
LN+SY+ + + ++L ++R+ L P S D + +++ N
Sbjct: 506 LNSSYRMRNTIQYKQELGT---AIVNFARIVPDGLLVFFP-SYSMMDMCVEFWKNRNHSN 561
Query: 587 SISQGSKCAVVRKKRV----KREGNNDLNTIE---SQENANKKGASFLAVCRGK------ 633
S S+ + + K + R+ +N + IE ++ + + GA F AVCRGK
Sbjct: 562 SASENTIWQRICKHKQPVIEPRQSSNFQSAIEDYRAKLHDSSSGAIFFAVCRGKVSEGLD 621
Query: 634 ---------IVVGIPFPNINDIQVSLKKKYNDTYRSSKN----LLSGNEWYCNQAFRALN 680
IV G+PF D +V LK++Y D + N L+G EWY QA RA+N
Sbjct: 622 FADRAGRAVIVTGMPFATPTDAKVRLKREYLDKQGTPSNKNTKTLTGEEWYVQQAARAVN 681
Query: 681 QAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFRD 739
QA+GR IRHR DYGAI+ DERF ++ +S WLR IK Y + ++GL FFRD
Sbjct: 682 QAVGRVIRHRHDYGAILYCDERFAWPNYQSQMSYWLRPHIKCYSKYGEVVQGLTRFFRD 740
>gi|345490538|ref|XP_001606129.2| PREDICTED: regulator of telomere elongation helicase 1 homolog
[Nasonia vitripennis]
Length = 1111
Score = 323 bits (828), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 235/812 (28%), Positives = 380/812 (46%), Gaps = 161/812 (19%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ G+ ++FP++PY Q +M +VI L + + +LESPTGTGK+LSLLCS+L W
Sbjct: 6 LNGVVIKFPFKPYQVQEDYMKKVIECLQEGK-----NGVLESPTGTGKTLSLLCSSLGWL 60
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVK 139
K + Q+ + + D + +G ++ + S + T Q N
Sbjct: 61 MIKKAQIQI------QVQSLGALDQVGSGNSYLDQFAKS-LDKGGGKSTNQAPTNTFGWS 113
Query: 140 KKMTPTIFYASRTHSQISQVISEYKKTAYR-VPMAVLASRKHYCTNKYVRDKENIDEE-- 196
P I YASRTHSQ+SQ + E K+T+YR V + VL SR C + V ++N +
Sbjct: 114 ---MPKIIYASRTHSQLSQAMQELKRTSYRHVSVTVLGSRDQLCIHPEVAKEQNTSNKIH 170
Query: 197 -CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSM 255
C+ + RN C + NV + P+++ + DIEDLV GQ ++ C Y+ ++ +
Sbjct: 171 MCQAKIKARN--CFYYNNVELRKDDPTIKDN----ILDIEDLVKTGQKLKCCPYFLSKEL 224
Query: 256 ADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAG-----SVDI--- 307
+A ++F PY+Y+++P R ++++ +++LDEAHN+E + DA S DI
Sbjct: 225 KQNADIIFMPYNYLLDPKTRKNQGIELQNNVVLLDEAHNVEKMCEDAASLQISSTDIAVC 284
Query: 308 ----------------DEDVL------LKLQMELEQVCSVNPMIYQPLIEMTQDLVGWIE 345
D+D L + E +C + M + +E D + +
Sbjct: 285 IDEITHVMKDMANETNDQDFLSEGSNAAQKDFSAEDLCILKAMFLE--LEKAIDSIQITK 342
Query: 346 RRKATLAKREFQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPH 405
R + + G L++A+I++ ++++ K + T +
Sbjct: 343 RDEG-----------DTYPGGYIFEILEKADITQGKELLVIDKLDKIVTYLTTVSASSFT 391
Query: 406 LSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYI-----KRDSKNPGGNW-----T 455
G ++ L + + S N + + + YI K+ KN W T
Sbjct: 392 RKGNALQKFSDLLR-VVFAGSTNNRYREKIKQCYKVYIQAEPAKKSFKNDA--WETKKIT 448
Query: 456 HT----LSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVI 510
T +S WC +P + + + + S+ILTSGTLSP+ F SE+G++ G LE PH++
Sbjct: 449 KTDGKLISYWCFSPGFGMQQLLDQGVRSVILTSGTLSPLKPFISEIGIEIGAQLENPHIV 508
Query: 511 DVDLQVLTSVISTGPDNYPLNASYKTAD----------------------------GYKL 542
+ Q+ +IS G D LN+SY T + Y +
Sbjct: 509 S-NKQICVGIISNGYDGCSLNSSYNTRNDPKYIASLGETIKILSCILPHGMLIFFPSYPI 567
Query: 543 MEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRV 602
M+K W++ G+WS++ A KP+FVEP+ S+E F V+ YY I
Sbjct: 568 MKKCQEEWQKMGKWSQIEASKPIFVEPQ--SKEGFNNVMTEYYKKI-------------- 611
Query: 603 KREGNNDLNTIESQENANKKGASFLAVCRGKI---------------VVGIPFPNINDIQ 647
+ KGA F+AVCRGK+ + G+PFP + D +
Sbjct: 612 --------------HDPAHKGAIFMAVCRGKVSEGLDFANANGRAVLITGLPFPPLKDPR 657
Query: 648 VSLKKKYNDTYRSS-KNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEE 706
+ LK++Y + R+S K LSG +WY +A RA+NQAIGR IRH+ DYGAI+L D RF
Sbjct: 658 IILKQRYLEENRASGKESLSGQQWYQLEASRAVNQAIGRIIRHKNDYGAILLCDCRFDNP 717
Query: 707 RNRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
+ H+S W+R IK++ F ++ L+ FFR
Sbjct: 718 SFKQHLSSWIRPHIKKFQDFRMVVKELREFFR 749
>gi|326428226|gb|EGD73796.1| hypothetical protein PTSG_05489 [Salpingoeca sp. ATCC 50818]
Length = 1032
Score = 322 bits (824), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 250/770 (32%), Positives = 365/770 (47%), Gaps = 83/770 (10%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+GG+ V FP+ PY Q +M +I L+ + +A+LESPTGTGK+L LLC++LAWQ
Sbjct: 7 IGGVWVSFPHNPYDLQTAYMNSLIQALNEGK-----NAMLESPTGTGKTLCLLCASLAWQ 61
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPES--QPSTIPPSTNGQTAQVAMNNKN 137
+ K A +A GGG P Q S Q Q +
Sbjct: 62 EQFT-KALTAQAEEDAAKAKAKAMAAGLGGGQGPHQGWQASGTGYEQQHQQHQPGNPAQG 120
Query: 138 V--KKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYV-RDKENID 194
+K P I YA+RTHSQI+Q I+E K+T+Y+ + VL SR+ C N V R N
Sbjct: 121 FTPQKPKAPRIIYATRTHSQIAQTIAELKRTSYKPNICVLGSREQLCINPEVSRLDTNAA 180
Query: 195 EE--CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAA 252
+ C+ + + C + V K G L H + DIEDLV +G+ C YY A
Sbjct: 181 KTRTCRHKVASQE--CSYYFQVPK--GKKDLAD---HGIADIEDLVKIGRSASCCPYYLA 233
Query: 253 RSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVL 312
R + AQLVF PY+YI+N R +D++ +++ILDEAHNIE + DA S D+ L
Sbjct: 234 RDGLESAQLVFVPYNYILNSRTRRNQRIDVETSVVILDEAHNIESVCEDASSFDLSTTDL 293
Query: 313 LKLQMELEQVCSVNPMIYQPLIEMTQD-------LVGWIERRKATLAKR---EFQHFFSC 362
EL ++ + + + L E+T D LV IE + L + Q
Sbjct: 294 AAFSNELARLSTADAEV---LGELTADDAKALHKLVLQIEEKLDALPVKIGAPMQR---- 346
Query: 363 WTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVITLEGLFSSLT 422
+GD R + N++ + ++L +A +S HLS + I L LF + T
Sbjct: 347 -SGDFIFRFFEGLNMTFETVQVILPKVEQAADAVGALKSSRCHLSKFADI-LRLLFGAET 404
Query: 423 YFFSRNGSHVSDYQLALQKYIKRDSKN----------PGGNWTHTLSLWCLNPAVVFKDV 472
N + + Y KR + P GN T+S WC + K +
Sbjct: 405 ---KDNLAMIRQYYYVNVSESKRQQQQQQQSGWAVAAPAGN-PRTISFWCFTSSFAMKSL 460
Query: 473 AELSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLN 531
+ + S++LTSGTLSP+++F++EL V F LE PH+I QV V++ GP + LN
Sbjct: 461 IQDGVRSVVLTSGTLSPLDTFAAELMVDFPIRLENPHIISKK-QVWAGVLTCGPRGHELN 519
Query: 532 ASYKTADGYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDF-----EIVLKHYYN 586
ASY T L N ++R+ K L P G + + ++
Sbjct: 520 ASYTTRSSPAYQADLGN---AIVNFARVVPKGLLVFFPSYGFMRQCIEGWQQSSGRSIWD 576
Query: 587 SISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGK------------- 633
I++ K V + + K E + Q G+ F AVCRGK
Sbjct: 577 QIAEYKKPVV--EPQNKHEFVAAMEVFYQQLKEPDAGSVFFAVCRGKVSEGLDFADENGR 634
Query: 634 --IVVGIPFPNINDIQVSLKKKYNDTYRSSKNL-LSGNEWYCNQAFRALNQAIGRCIRHR 690
I+ G+P+P D +V LKKK+ D ++ + LSG WY QA RA+NQAIGR IRHR
Sbjct: 635 AVIITGLPYPAAMDPRVLLKKKFLDRMKAQGTMRLSGQHWYSTQATRAVNQAIGRVIRHR 694
Query: 691 FDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFRDV 740
DYGAIIL D RF+ RN+ + WLR ++++ F + +++FF +V
Sbjct: 695 KDYGAIILADTRFKRTRNQ--LPAWLRAHVQEFRDFGEAQRSVRTFFNNV 742
>gi|149033944|gb|EDL88727.1| similar to helicase-like protein NHL isoform 2 [Rattus norvegicus]
Length = 1264
Score = 320 bits (821), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 242/800 (30%), Positives = 375/800 (46%), Gaps = 149/800 (18%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ G+ V+FP+QPY Q +M +V+ L + + +LESPTGTGK+L LLC+TLAW+
Sbjct: 6 LNGVTVDFPFQPYPCQQEYMTKVLECLQKK-----VNGILESPTGTGKTLCLLCTTLAWR 60
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPS-TNGQTAQVAMNNKNV 138
++ L++ ++++ ++ G F + S + NG + +
Sbjct: 61 EH--LRDAVSSLKIAE---------RVQGELFASRTLSSWRSAADANGDSIDCYTD---- 105
Query: 139 KKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE-- 196
P I YASRTHSQ++QVI E + T+YR + VL SR+ C + V+ +E+ +
Sbjct: 106 ----IPKIIYASRTHSQLTQVIGELRNTSYRPKVCVLGSREQLCIHPEVKKQESNHMQIS 161
Query: 197 -CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSM 255
C+ + R+ C + NV + SL++ + DIEDLV G + C YY +R++
Sbjct: 162 LCRKKVASRS--CHFYNNVEE----KSLEQELATPILDIEDLVKNGSKHKVCPYYLSRNL 215
Query: 256 ADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDID-EDVLLK 314
A ++F PY+Y+++ R A +D+KG ++I DEAHN+E I ++ S D+ DV
Sbjct: 216 KQQADIIFMPYNYLLDAKSRKAHNIDLKGTVVIFDEAHNVEKICEESASFDLTPRDVASG 275
Query: 315 LQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRE--- 371
L++ + QV + Q E+ Q+ + L E D+ + +
Sbjct: 276 LEV-INQVLEEQARVAQ-HGELQQEFIIDTSSSVILLHLEEAIDAVQLPGDDRGVTKPGS 333
Query: 372 -----LQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVITLEGLFSSLTYFFS 426
EA I+ Q +LE + I+ T + +G L+ L + FS
Sbjct: 334 YIFELFAEAQITFQTKGCILESLDQIIQHLTGRTGVFTNTAG-----LQKLMDIIQIVFS 388
Query: 427 RN---GSHVSDYQLALQKYIK---------RDSKNPGGNWTHT--------LSLWCLNPA 466
+ GS S L + K R + W+ T LS WC +P+
Sbjct: 389 VDPLEGSPGSQVGLGSSHFYKVHIHPETSHRRAAQRSDAWSTTASRKQGKVLSYWCFSPS 448
Query: 467 VVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGP 525
+++ + + ++ILTSGTL+P++SF+ E+ + F CLE PH+ID + Q+ VI GP
Sbjct: 449 HSMRELVQQGVRTLILTSGTLAPLSSFALEMQIPFPVCLENPHIIDKN-QLWVGVIPRGP 507
Query: 526 DNYPLNASYKTA----------------------------DGYKLMEKLCNRWRETGQWS 557
D L+++Y Y +MEK W+ G
Sbjct: 508 DGVQLSSAYDKRFSEECLSSLGKALGNIARVVPHGLLVFFPSYPVMEKSLEFWQAQGMSK 567
Query: 558 RLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQE 617
++ A KPLFVEP+ ++ F V+ YY ++V G+N
Sbjct: 568 KVEALKPLFVEPR--NKGSFSEVIDAYY--------------QQVASPGSN--------- 602
Query: 618 NANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKKYNDTYRSSK 662
GA+FLAVCRGK IV G+P+P D +V LK ++ D +
Sbjct: 603 -----GATFLAVCRGKASEGLDFSDMNGRGVIVTGLPYPPRMDPRVILKMQFLDEMKGRS 657
Query: 663 NL----LSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRK 718
+ LSG EWY QA RA+NQAIGR IRHR DYGAI L D RF RAH+ W+R
Sbjct: 658 RVGGQCLSGQEWYQQQASRAVNQAIGRVIRHRHDYGAIFLCDHRFAYADARAHLPSWVRP 717
Query: 719 SIKQYDSFDASLEGLKSFFR 738
+K YD+F + + FFR
Sbjct: 718 YLKVYDNFGRVIRDVAQFFR 737
>gi|414881660|tpg|DAA58791.1| TPA: hypothetical protein ZEAMMB73_410850, partial [Zea mays]
Length = 941
Score = 320 bits (821), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 253/808 (31%), Positives = 376/808 (46%), Gaps = 153/808 (18%)
Query: 15 LNAYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCS 74
+ Y + G+ V+FP+ Y Q+ +M RVI +L + + +ALLESPTGTGK+L LLC+
Sbjct: 1 MPVYSIRGVNVDFPFDAYDCQITYMDRVIESLQQGK-----NALLESPTGTGKTLCLLCA 55
Query: 75 TLAWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMN 134
+LAW++ T + GGG + +P + +Q + +
Sbjct: 56 SLAWRR-----------------TFGEFLRVGRGGGGTKQ-----LPYGSQPSASQQSED 93
Query: 135 NKNVKKKMT--PTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYV----- 187
+ + K++ + P I YASRTHSQ+ QVI E K T+YR MAVL SR+ C + V
Sbjct: 94 STSQKQQQSRYPVIIYASRTHSQLRQVIKELKATSYRPKMAVLGSREQMCIHDEVSKLHG 153
Query: 188 RDKENIDEECKLLLGDRNLGCPQFKNVHK-VRGHPSLQKGGCHEVHDIEDLVNVGQVVRG 246
R + N C L R CP +V + ++ P L +E DIEDL+N+G+
Sbjct: 154 RAQNN---ACHFLCKKRR--CPHNNHVAEFIKNKPELG----NEPFDIEDLINIGRHKGP 204
Query: 247 CSYYAARSMADDAQLVFCPYSYIINPVIRGAME-VDIKGAILILDEAHNIEDIARDAGSV 305
C YY +R ++ ++F PY+Y+I+P R ++ + A+LI DEAHN+E I DA S
Sbjct: 205 CPYYISRELSKSVDILFAPYNYLIDPGNRRSLNGIPWDNAVLIFDEAHNLESICADAASF 264
Query: 306 DIDEDVLLKLQMELEQ---VCSVNPMI-------YQPL-IEMTQDLVGWIERRKATLAKR 354
D+ + L E + +CS I + P + + L+ +E++ A L
Sbjct: 265 DLFPNNLTACIAEAHECIKLCSAKRSIENSADKQFDPENYAILKALLMALEKKIAELLIG 324
Query: 355 EFQHFFSCWTGDKALRELQEANISRQCFPILLE---CATKAIKEATDTESELPHLSGMSV 411
+ G L E NI+ L+E CA+ ++E ++ + +V
Sbjct: 325 SELGYTK--AGSYIYDFLSELNITSDTSKKLIETIDCASLLLEEGNSAQTGPGVQAKAAV 382
Query: 412 ITLEGLFSSLTYFFSRNG-SHVSDYQLALQ--KYIKRDSKNPGGNWTHTLSLWCLNPAVV 468
LE + L F G +H Y+ + + D+ G + TLS WC NP +
Sbjct: 383 SRLESIRDMLDIIFRGGGQNHAKYYRFHVNESQQTHGDALKFLGKSSRTLSWWCFNPGLA 442
Query: 469 FKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDN 527
++ +L + SIILTSGTLSP++S + EL ++F LE PHVI D QV V+ GP
Sbjct: 443 MEEFLKLGVRSIILTSGTLSPLDSLAMELNLEFPVRLENPHVISSD-QVWVGVVPVGPSG 501
Query: 528 YPLNASYKT---------------------ADG-------YKLMEKLCNRWR-------- 551
+ LN+SY+T DG Y +M+ + W+
Sbjct: 502 HALNSSYRTRNTIQYKQELGTAIVNFARIVPDGLLVFFPSYSMMDMCVDFWKNRNHSNSA 561
Query: 552 -ETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDL 610
E W R+ K +EP+ S +F+ ++ Y + S
Sbjct: 562 SENTIWQRICKHKQPVIEPRQSS--NFQSAIEDYRAKLHDSS------------------ 601
Query: 611 NTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKKYN 655
GA F AVCRGK IV G+PF D +V LK++Y
Sbjct: 602 -----------SGAIFFAVCRGKVSEGLDFADRAGRAVIVTGMPFATPTDAKVRLKREYL 650
Query: 656 DTYRSSKN----LLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAH 711
D + N +L+G EWY QA RA+NQA+GR IRHR DYGAII DERF ++
Sbjct: 651 DKQGTPSNKNTKMLTGEEWYVQQAARAVNQAVGRVIRHRHDYGAIIYCDERFVWPNYQSQ 710
Query: 712 ISKWLRKSIKQYDSFDASLEGLKSFFRD 739
+S WLR IK Y + ++GL FFRD
Sbjct: 711 MSYWLRPHIKCYSKYGEVVQGLTRFFRD 738
>gi|359482607|ref|XP_002279773.2| PREDICTED: regulator of telomere elongation helicase 1-like [Vitis
vinifera]
Length = 1084
Score = 318 bits (816), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 248/777 (31%), Positives = 367/777 (47%), Gaps = 99/777 (12%)
Query: 18 YHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLA 77
Y + GI V+FP++ Y QLV+M +VI +L C+ALLESPTGTGK+L LLC+TLA
Sbjct: 4 YKIRGIDVDFPFEAYDCQLVYMEKVIQSLQE-----RCNALLESPTGTGKTLCLLCATLA 58
Query: 78 WQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKN 137
W+++ L S + + G I SQ S +P S + +T
Sbjct: 59 WRKS------LGGFSTGR----------SEWNGQIMGSQHSDVPHSQSAKTN-------- 94
Query: 138 VKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYV---RDKENID 194
PTI YASRTHSQ+ QVI E K+T+YR M VL SR+ C ++ V R + +
Sbjct: 95 -----LPTIIYASRTHSQLRQVIQELKRTSYRPKMVVLGSREQLCIHEEVSLLRGRAQTN 149
Query: 195 EECKLLLGDRNLG--CPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAA 252
C L R C + V + G + DIEDLVN+G+ C YY +
Sbjct: 150 A-CHSLCRKRTKKGYCGHYSRVSDFMKY---NPGLGDDPIDIEDLVNIGRSNGPCPYYVS 205
Query: 253 RSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVL 312
R + ++F PY+Y+I+ R ++ V +ILI DEAHN+E + DA S D+ +L
Sbjct: 206 RELHKVVDILFAPYNYLIDRGNRKSLSVCWNNSILIFDEAHNLEGLCADAASFDLPSWLL 265
Query: 313 LKLQMELEQVCSVNPMIYQPLIEMTQD-------------LVGWIERRKATLAKREFQHF 359
E + V+ I + IE D L+ +E++ A + +
Sbjct: 266 TACISEAKNC--VDLSISRREIEKANDKSCNPDNFAILRALLLKLEKQIAEVPIESKELG 323
Query: 360 FSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVITLEGLFS 419
F+ G L + NI+ + +L++ +A + + + ++ LE +
Sbjct: 324 FT-RPGPYIYELLADLNITHKTATMLIDIIEEAALLLEEDAKGVAQKTKSTICRLETMSD 382
Query: 420 SLTYFFSRNG-SHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSL- 477
L F G +H Y++ +Q+ + G + TLS WC NP + ++ A L +
Sbjct: 383 ILKIIFRDGGNAHAKFYRVHVQEVEANAADALKGKASRTLSWWCFNPGIAMQEFAVLGVS 442
Query: 478 SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTA 537
SIILTSGTLSP+ SF+ EL ++F LE PHVI + Q+ V+ GP N+SY+T
Sbjct: 443 SIILTSGTLSPLESFAQELKLEFPVRLENPHVISSN-QIWAGVVPAGPSGCSFNSSYRTR 501
Query: 538 DGYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVV 597
D + ++L N ++R+ L P E K+ ++ S S
Sbjct: 502 DSLEYKQELGN---AIVNFARIVPDGLLVFFPSYYILEQCVGCWKNKSHANSTNSSTIWE 558
Query: 598 RKKRVK------REGNNDLNTIESQENANK----KGASFLAVCRGK-------------- 633
R + K R+ + ++IE N K GA F AVCRGK
Sbjct: 559 RICKHKQPVIEPRQSSLFPSSIEDYMNKLKDSSMSGAVFFAVCRGKVSEGLDFADHAGRA 618
Query: 634 -IVVGIPFPNINDIQVSLKKKYNDTYRSSK---------NLLSGNEWYCNQAFRALNQAI 683
++ GIPF D +V LK+++ D S+ +L+G EWY QA RA+NQA+
Sbjct: 619 VVITGIPFAMRTDPKVRLKREFLDQRGLSQKEGCKTLPIQVLTGEEWYTQQASRAVNQAV 678
Query: 684 GRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFRDV 740
GR IRH D+GAII DERF ++ IS W++ IK Y F + L FFRD
Sbjct: 679 GRVIRHCHDFGAIIFCDERFAHPNRQSQISLWIQPHIKCYSKFGDVVFTLTRFFRDA 735
>gi|363741498|ref|XP_417435.3| PREDICTED: regulator of telomere elongation helicase 1 [Gallus
gallus]
Length = 1220
Score = 318 bits (816), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 242/801 (30%), Positives = 364/801 (45%), Gaps = 167/801 (20%)
Query: 22 GIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQN 81
G+ V+FP+QPY Q +M +V+ L + +LESPTGTGK+L LLCSTLAW+++
Sbjct: 8 GVTVDFPFQPYECQETYMAKVLECLQ-----TKVNGILESPTGTGKTLCLLCSTLAWREH 62
Query: 82 CKLKNQLANISHSKPDTEAVTD-PLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKK 140
K I+ E D P+++ G +T+G +
Sbjct: 63 FKDTISARKIAQRMNGVELFPDRPMSSWGN-----------AATDGDIPTYYTD------ 105
Query: 141 KMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE---C 197
P I YASRTHSQ++QVI+E K T YR + VL SR+ C N V+ +E+ + C
Sbjct: 106 --IPKIIYASRTHSQLTQVINELKNTVYRPKICVLGSREQLCINPEVKRQESNHMQIYMC 163
Query: 198 KLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMAD 257
+ + R C + NV + S +KG + DIEDLV G R C YY +RS+
Sbjct: 164 RKKVMAR--ACHFYNNVEE----KSTEKGLMDSIMDIEDLVKNGSKHRACPYYLSRSLKQ 217
Query: 258 DAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQM 317
A ++F PY+Y+++ R A +++KG ++ILDEAHN+E + ++ S D+
Sbjct: 218 QADIIFMPYNYLLDAKSRRAHNIELKGTVVILDEAHNVERLCEESSSFDLT-------AY 270
Query: 318 ELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALR-ELQEAN 376
+L V ++ +E + + + E F+ + L EL++
Sbjct: 271 DLASAIDVINLV--------------LEEQAKVVQQNEVNAEFNMESISSGLNMELEDIA 316
Query: 377 ISRQCFPILLECATKAIK------EATDTESELPHLSGMSVIT-------LEGLFSSLTY 423
++ + LE A A++ T S + L + IT LE L L +
Sbjct: 317 KIKKIL-LQLESAIDAVELPPNDSGVTKDGSYIFELFAQAQITFQTKTSLLESLDQILQF 375
Query: 424 FFSRNGSHVSDYQL-----ALQKYIKRDSKNPGGN------WT--------HTLSLWCLN 464
R G ++ L +Q +I D+ N W TLS WC +
Sbjct: 376 LSGRTGIFINTSGLHKLSDIIQVHIHLDNSNQKKKKERTDLWDSSAAKKQGKTLSYWCFS 435
Query: 465 PAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVIST 523
P ++ + +IILTSGTLSP++SF+ E+ + F LE PHVID Q+ +I
Sbjct: 436 PGYSMHELVRQGVRTIILTSGTLSPLSSFTMEMQIPFPVLLENPHVID-KRQLWVGIIPK 494
Query: 524 GPDNYPLNASYKTA----------------------------DGYKLMEKLCNRWRETGQ 555
GPD LN++Y+ Y +M+K WRE
Sbjct: 495 GPDGTVLNSAYERRFSEDYLSSLGKTIGNLVRVVPHGLLVFFPSYPVMDKSLEYWREHDF 554
Query: 556 WSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIES 615
R+ KP+FVEP+ ++ F V+ YY+ I+ C
Sbjct: 555 AKRIEEVKPMFVEPR--NKGSFAEVMDAYYSKIA----C--------------------- 587
Query: 616 QENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKKYNDTYRS 660
GA+FLAVCRGK I+ G+PFP + +V LK ++ + +
Sbjct: 588 ---PKSNGAAFLAVCRGKASEGLDFADMNGRGVIITGLPFPPRWEPRVVLKMQFLNEMKK 644
Query: 661 S---KNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLR 717
S LSG++WY QA RA+NQAIGR IRHR DYGAI L D+RF + R + W+R
Sbjct: 645 SNMGAQCLSGHQWYNQQASRAVNQAIGRVIRHRQDYGAIFLCDDRFTTDNVRGKLPSWVR 704
Query: 718 KSIKQYDSFDASLEGLKSFFR 738
+ YD+F ++ + FFR
Sbjct: 705 PYVNVYDNFGHAVRSVSVFFR 725
>gi|224054204|ref|XP_002298143.1| predicted protein [Populus trichocarpa]
gi|222845401|gb|EEE82948.1| predicted protein [Populus trichocarpa]
Length = 749
Score = 317 bits (813), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 248/806 (30%), Positives = 366/806 (45%), Gaps = 166/806 (20%)
Query: 15 LNAYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCS 74
+ Y + GI V+FP++ Y QLV+M +VI +L C+ALLESPTGTGK+L LLC+
Sbjct: 2 MPTYKIRGIDVDFPFEAYDCQLVYMEKVIQSLQ-----NKCNALLESPTGTGKTLCLLCA 56
Query: 75 TLAWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMN 134
TLAW+++ GGF ST NG+ A ++
Sbjct: 57 TLAWRKSL--------------------------GGF------STGKIERNGRIAGGKLD 84
Query: 135 ---NKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYV---R 188
+ + + PTI YASRTHSQ+ QVI E K+++YR M +L SR+ C ++ V R
Sbjct: 85 IVPSSQSEDRNLPTIVYASRTHSQLRQVIQELKRSSYRPKMVILGSREQLCIHEEVSLLR 144
Query: 189 DKENIDEECKLLLGDRN-LGCPQFKNVHK-VRGHPSLQKGGCHEVHDIEDLVNVGQVVRG 246
K + C L+ R C + V V+ +P L E DIEDLVN+G+
Sbjct: 145 GKVQ-NNACHLICKTRGKRQCTHYSRVADYVKCNPHLGD----EPVDIEDLVNIGRTFGP 199
Query: 247 CSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVD 306
C YY +R + ++F PY+Y+I+ R ++ +D +ILI DEAHN+E + DA S D
Sbjct: 200 CPYYISRELHKVVDILFAPYNYLIDRGNRKSLAIDWDNSILIFDEAHNLESLCADAASFD 259
Query: 307 IDEDVLLKLQMELEQVCSV--------NPMIYQPL-IEMTQDLVGWIERRKATLAKREFQ 357
+ +L E + + N + P + + L+ +E+R A + +
Sbjct: 260 LPSWLLTACISEAKSCIDLSVTRREESNDKSWNPDNFAILRALLLKLEKRIAEVPIESKE 319
Query: 358 HFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDT----ESELPHLSGMSVIT 413
F+ G L + N++ + ATK I D E + S +
Sbjct: 320 LGFTK-PGPYIYELLADLNVTH-------DTATKIIDIIKDAAVLLEEDKQDKSKGTGCR 371
Query: 414 LEGLFSSLTYFF-SRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDV 472
LE + L F +N SH + Y+ P + TLS WC NP + ++
Sbjct: 372 LESISDFLQIIFREKNNSHANFYREGEANAADVLKGKP----SRTLSWWCFNPGIAMQEF 427
Query: 473 AELSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLN 531
+ + + SIILTSGTLSP++SF+ EL + F LE PHVI + Q+ V+ GP LN
Sbjct: 428 SRMGVRSIILTSGTLSPLDSFAQELKLDFPIRLENPHVISSN-QIWAGVVPAGPSGRSLN 486
Query: 532 ASYKTAD----------------------------GYKLMEKLCNRWRETGQ------WS 557
+SY+T D Y L+++ + W+ Q W
Sbjct: 487 SSYRTRDSLEYKQELGNAIVNFARIVPDGLLVFFPSYYLLDQCISCWKNMSQANSTTIWE 546
Query: 558 RLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQE 617
R+ K VEP+ S F + ++ Y + +
Sbjct: 547 RICKHKKPVVEPRQSSL--FPLAIEDYLAKL----------------------------K 576
Query: 618 NANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKKYNDTYRSSK 662
+ + GA F AVCRGK ++ G+PF D +V LK++Y D S+
Sbjct: 577 DTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFAMRTDPKVRLKREYLDGQTHSQ 636
Query: 663 ---------NLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHIS 713
+LSG EWY QA RA+NQA+GR IRHR+DYGAII DERF+ + IS
Sbjct: 637 RDGCKMLKLQVLSGEEWYGQQASRAVNQAVGRVIRHRYDYGAIIFCDERFEHRNRQTQIS 696
Query: 714 KWLRKSIKQYDSFDASLEGLKSFFRD 739
W++ IK + F + L FFRD
Sbjct: 697 LWIQPHIKCHSKFGDVVFTLSRFFRD 722
>gi|396080955|gb|AFN82575.1| Rad3/XPD ATP-dependent DNA-binding helicase [Encephalitozoon
romaleae SJ-2008]
Length = 678
Score = 317 bits (812), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 223/755 (29%), Positives = 367/755 (48%), Gaps = 115/755 (15%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ G+ +E P++PY +Q++ M ++IS L L+ESPTGTGKSLS+LC+ L +
Sbjct: 6 ISGVPIEMPFEPYPAQIITMTKLISCLMTG-----TSGLVESPTGTGKSLSILCAALGYS 60
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVK 139
+ H K + GGG M + VK
Sbjct: 61 E------------HLKRGIRSGCGKRREGGG----------------------MKGEEVK 86
Query: 140 KKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEECKL 199
++ I SRTH Q+ Q+I + +KT Y+ +++LASR YC + +R+
Sbjct: 87 EEKLKIII-CSRTHKQLDQLIDQLRKTQYKPRISILASRSQYCVSPKLRE---------- 135
Query: 200 LLGDRNLGCPQF---KNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMA 256
+ D+N GC + N G L K V DIE+L G+ GC YYA+R +
Sbjct: 136 -VTDKNTGCNELVKSGNCAYFTGKDRLAKRVGDRVFDIEELKGEGRRCGGCPYYASRILN 194
Query: 257 DDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQ 316
+DA+++F PY+Y+I+P IR + ++ +++I+DEAHNIED+ R +GS+++ + +Q
Sbjct: 195 EDAEVIFAPYNYLIDPRIRENTGIGLENSVVIIDEAHNIEDVCRSSGSIELGSRAIEIIQ 254
Query: 317 MELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALR------ 370
E+ + ++ + ++ + + + R+ EF + G +R
Sbjct: 255 NEILGAVKRSGILGEIKLDFINLMDFFRKLREGADNTDEFDR--DTFGGKLRIRRGKDIK 312
Query: 371 -ELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVITLEGLFSSLTYFFSRNG 429
EL+ IS++ F + ++ + AI++ + + +L ++S + V LEGL S L+ + +
Sbjct: 313 DELERMGISKE-FVLKIKNSIYAIQKNEEAK-DLLNVSTLHV--LEGLDSVLS---AIHF 365
Query: 430 SHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPM 489
S Y K + +N + + + W L+ F+ S++L SGTL+P
Sbjct: 366 SGCDAYSFVFHKVNDENVRNSRAS-KFSYNFWLLDAGYTFRSFVGKVRSVVLLSGTLTPF 424
Query: 490 NSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTADGYKLMEKLCN- 548
+SFSSELG +F + APH+I QV S + G + L +Y +D + +++LC
Sbjct: 425 SSFSSELGHEFAHSIVAPHLI-TQKQVFVSCVRKGHLSKELTGTYGVSDTPQYLDQLCKI 483
Query: 549 ---------------------RWRETGQWSRLNAKKP-LFVEPKGGSQEDFEIVLKHYYN 586
+ E Q R+ P + EPK G+ +FE V+K Y N
Sbjct: 484 IVDVSSKIKGHGGTLVFVPSYSFLENLQ-KRMGGTNPGILTEPKNGAGNEFEKVMKRYKN 542
Query: 587 SISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDI 646
I+ + R K D + R I VGIP+P+++D
Sbjct: 543 RIAMKQSAVFMCVYRGKASEGIDFKD---------------SFARAVIAVGIPYPSLHDP 587
Query: 647 QVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEE 706
QV LKK++ND Y+S +G WY QAFRA+NQA+GR IRH+ D+G ++LLD R+ E+
Sbjct: 588 QVELKKEFNDRYKS----FNGRLWYEAQAFRAVNQALGRAIRHKDDWGIVMLLDNRYSEK 643
Query: 707 RNRAHISKWLRKSIKQYDSFDASLEGLKSFFRDVK 741
R + H+SKW+ ++IK YDS+D + L F +K
Sbjct: 644 RVQNHLSKWVAENIKVYDSYDGCVSDLLRFLSLIK 678
>gi|300797873|ref|NP_001178786.1| regulator of telomere elongation helicase 1 [Rattus norvegicus]
gi|229891752|sp|Q5RJZ1.2|RTEL1_RAT RecName: Full=Regulator of telomere elongation helicase 1
Length = 1274
Score = 317 bits (812), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 247/813 (30%), Positives = 376/813 (46%), Gaps = 162/813 (19%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ G+ V+FP+QPY Q +M +V+ L + + +LESPTGTGK+L LLC+TLAW+
Sbjct: 6 LNGVTVDFPFQPYPCQQEYMTKVLECLQKK-----VNGILESPTGTGKTLCLLCTTLAWR 60
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPS-TNGQTAQVAMNNKNV 138
++ L++ ++++ ++ G F + S + NG + +
Sbjct: 61 EH--LRDAVSSLKIAE---------RVQGELFASRTLSSWRSAADANGDSIDCYTD---- 105
Query: 139 KKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE-- 196
P I YASRTHSQ++QVI E + T+YR + VL SR+ C + V+ +E+ +
Sbjct: 106 ----IPKIIYASRTHSQLTQVIGELRNTSYRPKVCVLGSREQLCIHPEVKKQESNHMQIS 161
Query: 197 -CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSM 255
C+ + R+ C + NV + SL++ + DIEDLV G + C YY +R++
Sbjct: 162 LCRKKVASRS--CHFYNNVEE----KSLEQELATPILDIEDLVKNGSKHKVCPYYLSRNL 215
Query: 256 ADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDID-EDVLLK 314
A ++F PY+Y+++ R A +D+KG ++I DEAHN+E I ++ S D+ DV
Sbjct: 216 KQQADIIFMPYNYLLDAKSRKAHNIDLKGTVVIFDEAHNVEKICEESASFDLTPRDVASG 275
Query: 315 LQMELEQVCSVNPMIYQPLIEMTQDLV------GW------IERRKATLAKREFQHFFSC 362
L++ + QV + Q E+ Q+ + G I + K L E
Sbjct: 276 LEV-INQVLEEQARVAQ-HGELQQEFIIDTSSSGLNMELEDIAKLKMILLHLEEAIDAVQ 333
Query: 363 WTGDK---------ALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVIT 413
GD EA I+ Q +LE + I+ T + +G
Sbjct: 334 LPGDDRGVTKPGSYIFELFAEAQITFQTKGCILESLDQIIQHLTGRTGVFTNTAG----- 388
Query: 414 LEGLFSSLTYFFSRN---GSHVSDYQLALQKYIK---------RDSKNPGGNWTHT---- 457
L+ L + FS + GS S L + K R + W+ T
Sbjct: 389 LQKLMDIIQIVFSVDPLEGSPGSQVGLGSSHFYKVHIHPETSHRRAAQRSDAWSTTASRK 448
Query: 458 ----LSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDV 512
LS WC +P+ +++ + + ++ILTSGTL+P++SF+ E+ + F CLE PH+ID
Sbjct: 449 QGKVLSYWCFSPSHSMRELVQQGVRTLILTSGTLAPLSSFALEMQIPFPVCLENPHIIDK 508
Query: 513 DLQVLTSVISTGPDNYPLNASYKTA----------------------------DGYKLME 544
+ Q+ VI GPD L+++Y Y +ME
Sbjct: 509 N-QLWVGVIPRGPDGVQLSSAYDKRFSEECLSSLGKALGNIARVVPHGLLVFFPSYPVME 567
Query: 545 KLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKR 604
K W+ G ++ A KPLFVEP+ ++ F V+ YY ++V
Sbjct: 568 KSLEFWQAQGMSKKVEALKPLFVEPR--NKGSFSEVIDAYY--------------QQVAS 611
Query: 605 EGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVS 649
G+N GA+FLAVCRGK IV G+P+P D +V
Sbjct: 612 PGSN--------------GATFLAVCRGKASEGLDFSDMNGRGVIVTGLPYPPRMDPRVI 657
Query: 650 LKKKYNDTY----RSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQE 705
LK ++ D R LSG EWY QA RA+NQAIGR IRHR DYGAI L D RF
Sbjct: 658 LKMQFLDEMKGRSRVGGQCLSGQEWYQQQASRAVNQAIGRVIRHRHDYGAIFLCDHRFAY 717
Query: 706 ERNRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
RAH+ W+R +K YD+F + + FFR
Sbjct: 718 ADARAHLPSWVRPYLKVYDNFGRVIRDVAQFFR 750
>gi|357455003|ref|XP_003597782.1| Regulator of telomere elongation helicase [Medicago truncatula]
gi|355486830|gb|AES68033.1| Regulator of telomere elongation helicase [Medicago truncatula]
Length = 1089
Score = 317 bits (811), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 247/824 (29%), Positives = 366/824 (44%), Gaps = 172/824 (20%)
Query: 13 KPLNAYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLL 72
K + Y + GI V+FPY+ Y SQLV+M +V+ +L +ALLESPTGTGK+L LL
Sbjct: 40 KKMPTYKIRGIDVDFPYEAYDSQLVYMDKVMQSLQE-----ESNALLESPTGTGKTLCLL 94
Query: 73 CSTLAWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVA 132
C+TLAW+++ G F S +I NG+T +V+
Sbjct: 95 CATLAWRKSL--------------------------GSF---STGMSIKTGDNGKT-EVS 124
Query: 133 MNNKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTN---KYVRD 189
+ PTI YASRTHSQI QVI E K+T+YR M VL SR+ +C + K +R
Sbjct: 125 SSQSEPGASKFPTIVYASRTHSQIRQVIQELKRTSYRPKMTVLGSREQFCIHDEVKLLRG 184
Query: 190 KENIDEECKLLLGDR---NLGCPQFKNV-HKVRGHPSLQKGGCHEVHDIEDLVNVGQVVR 245
+ + C+ R C F V ++ +P+L + E DIEDLVN+G+
Sbjct: 185 RTQTNA-CRFACRRRAKQKRRCNHFNQVLDYLKQNPNLGE----EPVDIEDLVNIGKTSG 239
Query: 246 GCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSV 305
C Y+ A+ + ++F PY+Y+I+ R A+++ +ILI DEAHN+E I DA S
Sbjct: 240 PCPYHLAKELHKAVDIIFAPYNYLIDRGKRKALQISWSNSILIFDEAHNLESICADAASF 299
Query: 306 DIDEDVLLK--------LQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQ 357
D+ +L + + +E+ N P + ++ E +
Sbjct: 300 DLPSWLLTACISEAQSCVDLLIERRNKSNDKSQNPDDFAILKALLLKLEKRIAEVHIESK 359
Query: 358 HFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVITLEGL 417
G L + NI+ + P L T A +T E + S ++ LE +
Sbjct: 360 ELGFTKPGPYIFELLADLNITHKTAPKLKSIVTDA---STLLEEDSQEKSTSNICRLETM 416
Query: 418 FSSLTYFFSRNG--SHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAEL 475
L F R+G SH Y++ +++ + G + TLS WC NP + ++ A+
Sbjct: 417 KDILDIIF-RDGRTSHAKYYRVHVKEAEAWAANGSLGKVSRTLSWWCFNPGIALEEFAKD 475
Query: 476 SL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASY 534
+ SIILTSGTLSP++SF+ EL + F LE PHVI + Q+ V+ GP N+SY
Sbjct: 476 GVRSIILTSGTLSPLDSFAEELKLDFPIRLENPHVIGPN-QIWAGVVPVGPLGRTFNSSY 534
Query: 535 KTAD----------------------------GYKLMEKLCNRWRETGQ-----WSRLNA 561
+T D Y L+E+ W+ W R+
Sbjct: 535 RTRDTMEYKQELGNAIVNLTRIVPDGLLVFFPSYYLLEQSIGCWKSLSNDGSSIWERICK 594
Query: 562 KKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANK 621
K +EP+ S F +K Y ++ +
Sbjct: 595 NKKPVIEPRESSM--FTSSIKDYLTKLN----------------------------DTTA 624
Query: 622 KGASFLAVCRGK---------------IVVGIPFPNINDIQ------------------- 647
GA F AVCRGK +V G+P+ + D +
Sbjct: 625 SGAVFFAVCRGKVSEGLDFADHAGRAVVVTGLPYATVTDPKSIAANSAAITAARCGAVLE 684
Query: 648 --------VSLKKKYNDTYRSSKN----LLSGNEWYCNQAFRALNQAIGRCIRHRFDYGA 695
V LK++Y D ++ +L+G+EWY QA RA+NQA+GR IRHR DYGA
Sbjct: 685 RYATSHSVVRLKREYLDQQSGAQGGSFKVLTGDEWYNQQASRAVNQAVGRVIRHRHDYGA 744
Query: 696 IILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFRD 739
II DERF + ++ +SKW++ IK Y F + L FFRD
Sbjct: 745 IIFCDERFTQPHRQSQVSKWIQPHIKCYSRFGEVVFTLTRFFRD 788
>gi|401825484|ref|XP_003886837.1| RAD3-like DNA-binding helicase [Encephalitozoon hellem ATCC 50504]
gi|392997993|gb|AFM97856.1| RAD3-like DNA-binding helicase [Encephalitozoon hellem ATCC 50504]
Length = 678
Score = 316 bits (809), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 225/769 (29%), Positives = 373/769 (48%), Gaps = 143/769 (18%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ G+ ++ P++PY +Q+V M ++IS L L+ESPTGTGKSLS+LC+ L +
Sbjct: 6 ISGVPIDMPFEPYPAQIVTMTKLISCLMTG-----TSGLVESPTGTGKSLSILCAVLGYN 60
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVK 139
++ LK + S + + GGG G+ A
Sbjct: 61 EH--LKKGIGGCSAKRRE----------GGG-------------QKGEEA---------- 85
Query: 140 KKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEECKL 199
K+ I SRTH Q+ Q+I + +KT YR +++LASR YC + + D
Sbjct: 86 KEEKLKIIICSRTHKQLDQLIDQLRKTQYRPRISILASRSQYCISPKLGD---------- 135
Query: 200 LLGDRNLGCPQF---KNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMA 256
+ D+N GC + + G L K + DIE+L G+ GC YYA+R +
Sbjct: 136 -VADKNTGCNELVKSGSCAYFTGKDRLAKRVGDRIFDIEELKGEGRRCGGCPYYASRILN 194
Query: 257 DDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQ 316
+DA+++F PY+Y+I+P IRG + ++ +++I+DEAHNIED+ R +GS+++ + +Q
Sbjct: 195 EDAEVIFAPYNYLIDPRIRGNTGISLENSVVIVDEAHNIEDVCRSSGSIELGSRTIEIIQ 254
Query: 317 MELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALR------ 370
E+ + ++ + ++ + + + R+ + EF + G +R
Sbjct: 255 NEILGAVKRSGILGEVKLDFINLMDFFKKLREGAESTDEFDR--DTFGGKLRIRKGRDIK 312
Query: 371 -ELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVITLEGLFSSLTYFFSRNG 429
EL+ I ++ F + ++ + AI++ + + +L ++S + LEGL S L+ + +
Sbjct: 313 DELERMGIGKE-FVLKIKNSIYAIQKNEEAK-DLLNVSTFHI--LEGLDSVLS---AIHF 365
Query: 430 SHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPM 489
S Y K + +N + + + W L+ F+ S++L SGTL+P
Sbjct: 366 SGCDAYSFVFHKVSDENIRNSRSS-KFSYNFWLLDAGYTFRSFVGKVRSVVLLSGTLTPF 424
Query: 490 NSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTADGYKLMEKLC-- 547
+SFSSELG +F + APH+I QV S I G L +Y +D + +++L
Sbjct: 425 SSFSSELGHEFAHSIVAPHLI-TQKQVFVSCIKKGHLARELTGTYGVSDTPQYLDQLLRI 483
Query: 548 -----NRWRETG-------QWSRL--------NAKKPLFVEPKGGSQEDFEIVLKHYYNS 587
N+ + G +S L + +EPK G+ +FE V+K Y N
Sbjct: 484 IVDVSNKIKGHGGTLVFVPSYSFLENLQKRMGGGASGILIEPKSGAGNEFEKVMKRYKNR 543
Query: 588 ISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGK-------------- 633
I A K+ A F+ V RGK
Sbjct: 544 I------------------------------ATKQSAIFMCVYRGKASEGIDFKDSFARA 573
Query: 634 -IVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFD 692
I VGIP+P+++D QV LKK++ND Y+S +G WY QAFRA+NQA+GR IRH+ D
Sbjct: 574 VIAVGIPYPSLHDPQVELKKEFNDRYKS----FNGRLWYEAQAFRAVNQALGRAIRHKDD 629
Query: 693 YGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFRDVK 741
+G ++LLD R+ E+R ++H+SKW+ ++I+ YDS+D + L F +K
Sbjct: 630 WGVVMLLDNRYSEKRVQSHLSKWVTENIRVYDSYDGCVSELSGFLSSIK 678
>gi|170034957|ref|XP_001845338.1| fanconi anemia group J protein [Culex quinquefasciatus]
gi|229891619|sp|B0W9F4.1|RTEL1_CULQU RecName: Full=Regulator of telomere elongation helicase 1 homolog
gi|167876796|gb|EDS40179.1| fanconi anemia group J protein [Culex quinquefasciatus]
Length = 978
Score = 315 bits (808), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 240/822 (29%), Positives = 374/822 (45%), Gaps = 160/822 (19%)
Query: 18 YHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLA 77
Y + GI V FP++PY Q +M RVI L + + +LESPTGTGK+LSLLCS+LA
Sbjct: 4 YLINGIPVNFPFEPYQVQRDYMARVIECLQNSS-----NGVLESPTGTGKTLSLLCSSLA 58
Query: 78 WQQNCKLK---NQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMN 134
W + K + +Q N+S K F + +
Sbjct: 59 WILHKKAQVQASQRTNVSELKEFE------------FEKKKMGGGGGGPKPEMDKLLDEL 106
Query: 135 NKNVKKKM----TPTIFYASRTHSQISQVISEYKKTAYRVPMAV-LASRKHYCTNKYVRD 189
N+N K+ P I YASRTHSQ++Q + E K T+Y AV L SR C + V
Sbjct: 107 NENSGKEGGRWGVPKIIYASRTHSQLTQAMQEMKNTSYGFMRAVILGSRDQLCIHPEVAK 166
Query: 190 KENIDEE---CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRG 246
+E + CK + R C + V + P + + DIEDLV V ++
Sbjct: 167 EEGNAVKTNLCKAKIQAR--ACSFYSRVEACKERPEITGS---TIMDIEDLVRVSTKLKA 221
Query: 247 CSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVD 306
C ++ ++ + ++A ++F PY+Y+++P R A +++ I+ILDEAHN++ + ++ S+
Sbjct: 222 CPFFMSKELIENADVLFMPYNYLLDPKARKANNLELANTIIILDEAHNVDKMCEESASMQ 281
Query: 307 IDEDVLLKLQMELEQVCSVNPMIYQPLI---------EMTQDLVGWIERRKATLAKR--- 354
I + + ++ V S+ ++ + + T D + ++ +L K
Sbjct: 282 IRSS---DIALCIDDVTSIMKVMDNTVAIPEDDDAKKDFTIDDLALLKEMLLSLEKTVDE 338
Query: 355 ---EFQHFFSCWTGDKALRELQEANISRQCFPI---LLECATKAIKEATDTESELPHLSG 408
F S G ++ANI + I LLE + I T+ + + G
Sbjct: 339 IPVMFSQGGSTQPGTYIFEIFEKANIKEGNYHIIAQLLENIIQYIATITEKNNFVRRGGG 398
Query: 409 MSVITLEGLFSSLTYFFSRNGSHVSD---------YQLALQKYIKRDSKNPGGNWTHT-- 457
+ + L SL+ F+ +G + + QK ++ ++K G WT T
Sbjct: 399 LQI-----LAESLSIMFAGSGPQYRESIDKCYKCHIDIEEQKKVRGNTKQADG-WTATKQ 452
Query: 458 -----------LSLWCLNPAVVFKD-VAELSLSIILTSGTLSPMNSFSSELGVQFGTCLE 505
++ WC NP + + + SIILTSGTL+P+ SEL + LE
Sbjct: 453 LVPSVKANAKVINFWCFNPGFGMRQLLGRNARSIILTSGTLAPLKPLISELDIPIAVKLE 512
Query: 506 APHVIDVDLQVLTSVISTGPDNYPLNASYKTAD--------------------------- 538
PH+ID QV ++ GPD LN+SY D
Sbjct: 513 NPHIIDGS-QVCVKIVGQGPDKESLNSSYGNRDNPKYISSLGRTILSFCPIIPGGLLVFF 571
Query: 539 -GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVV 597
Y L+ K W+ETG W++++ KP+FVEP+G Q F + YY I+
Sbjct: 572 PSYPLLNKCQEAWQETGIWAQISRTKPIFVEPRGKDQ--FLNTMTEYYAKIN-------- 621
Query: 598 RKKRVKREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPN 642
+ + KGA F+AVCRGK I+ G+PFP
Sbjct: 622 --------------------DPDGKGAVFMAVCRGKVSEGLDFADMNGRACIITGLPFPP 661
Query: 643 INDIQVSLKKKYNDTYRSSKN-LLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDE 701
+ D +V LKK+Y R+ +N ++SG+EWY +A RA+NQAIGR IRH+ DYGAI+L D
Sbjct: 662 LKDARVILKKRYLQEVRTRENEIISGDEWYSLEAARAVNQAIGRVIRHKNDYGAILLCDN 721
Query: 702 RFQEERNRAHISKWLRKSI--KQYDSFDASLEGLKSFFRDVK 741
RF R +A +S W++K + Q+ +F + L FFR+ +
Sbjct: 722 RFHNPRQKAQLSSWIQKHLNTAQHPTFGPIVRELSQFFRNAE 763
>gi|19074028|ref|NP_584634.1| ATP-DEPENDENT DNA-BINDING HELICASE (RAD3/XPD subfamily)
[Encephalitozoon cuniculi GB-M1]
gi|19068670|emb|CAD25138.1| ATP-DEPENDENT DNA-BINDING HELICASE (RAD3/XPD subfamily)
[Encephalitozoon cuniculi GB-M1]
gi|449329243|gb|AGE95516.1| ATP-dependent DNA-binding helicase [Encephalitozoon cuniculi]
Length = 678
Score = 315 bits (808), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 222/770 (28%), Positives = 365/770 (47%), Gaps = 145/770 (18%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ G+ +E P++PY +Q+V M ++IS L L+ESPTGTGKSLS++C+ L +
Sbjct: 6 ISGVPIEMPFEPYPAQIVTMTKLISCLMT-----RTSGLVESPTGTGKSLSIICAVLGYN 60
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVK 139
+ H K + GGG P+ + +
Sbjct: 61 E------------HLKRSIRGIGAKRREGGG--PKGEEA--------------------- 85
Query: 140 KKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEECKL 199
++ I SRTH Q+ Q++ + +KT YR +++LASR YC + + D
Sbjct: 86 REEKLKIIICSRTHKQLDQLVDQLRKTQYRPRISILASRAQYCISPKLSD---------- 135
Query: 200 LLGDRNLGCPQF---KNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMA 256
+ D+N GC + + G L K ++ DIE+L G+ GC YYA+R +
Sbjct: 136 -VADKNTGCSELVKSGSCAYFTGKDRLAKKVGDKIFDIEELKGEGRRCVGCPYYASRILN 194
Query: 257 DDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQ 316
+DA+++F PY+Y+I+ IR + + ++ +++I+DEAHNIED+ R +GS+++ ++ +Q
Sbjct: 195 EDAEVIFAPYNYLIDSRIRESTGISLENSVVIVDEAHNIEDVCRSSGSIELSSRIMEIIQ 254
Query: 317 MELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHF-----FSCWTGDKALRE 371
E+ + + + ++ + + + R+ + EF G + E
Sbjct: 255 NEILGAVKRSGALGEIRMDFVNLMDFFRKLREGAESTDEFDRVTAGGKLRIRKGREIKEE 314
Query: 372 LQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSH 431
L+ I ++ F + ++ + AI+++ D + +L ++S V LEGL S L+ H
Sbjct: 315 LERMGIGKE-FVLKIKNSIYAIQKSEDAK-DLLNVSTFHV--LEGLDSVLSAI------H 364
Query: 432 VSD---YQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSP 488
SD Y K + KN + + + W L+ F+ S++L SGTL+P
Sbjct: 365 FSDCDAYSFVFHKMNDENVKNS-RSCRFSYNFWLLDGGYTFRSFVGKVRSVVLLSGTLTP 423
Query: 489 MNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTADGYKLMEKLCN 548
+SFSSELG +F + APH+I QV S + G L +Y +D + +++LC
Sbjct: 424 FSSFSSELGHEFAHTIVAPHLI-TQKQVFVSCVRKGHLLKELIGTYGVSDTPQYLDQLCR 482
Query: 549 ----------------------RWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYN 586
+ E Q L VEPK G+ +FE V++ Y N
Sbjct: 483 VIVDVSCKIKDHGGTLVFVPSYSFLENLQKRMGGVSSGLLVEPKSGAGNEFEKVMRRYKN 542
Query: 587 SISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGK------------- 633
I A K+ A F+ V RGK
Sbjct: 543 RI------------------------------ATKQSAVFMCVYRGKASEGIDFKDSFAR 572
Query: 634 --IVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRF 691
I VGIP+P+++D QV LKK++ND Y+S +G WY QAFRA+NQA+GR IRH+
Sbjct: 573 AVIAVGIPYPSLHDPQVELKKEFNDKYKS----FNGRLWYEAQAFRAVNQALGRAIRHKD 628
Query: 692 DYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFRDVK 741
D+G ++LLD R+ E+R ++ +SKW+ ++IK YDS+D + L F +K
Sbjct: 629 DWGIVMLLDSRYSEKRVQSQLSKWVAENIKTYDSYDGCVSELVRFLSLIK 678
>gi|327284022|ref|XP_003226738.1| PREDICTED: regulator of telomere elongation helicase 1-like [Anolis
carolinensis]
Length = 1142
Score = 315 bits (808), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 244/801 (30%), Positives = 358/801 (44%), Gaps = 164/801 (20%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ GI V+FP++PY Q +M RV+ L + + +LESPTGTGK+L LLCSTLAWQ
Sbjct: 6 LNGITVDFPFEPYKCQEEYMSRVLECLQK-----QVNGILESPTGTGKTLCLLCSTLAWQ 60
Query: 80 QNCKLKNQLANISHSKPDTEAVTD-PLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNV 138
++ K I+ E D P++ G + +++ +P
Sbjct: 61 EHFKDAISAQKIAQRLGGAELFADRPMSFWGNAVTDAE---LPAYYTD------------ 105
Query: 139 KKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE-- 196
P I YASRTHSQ++QVI E K T YR + VL SR+ C + V+ +E+ +
Sbjct: 106 ----IPKIIYASRTHSQLTQVIGELKNTVYRPKVCVLGSREQLCIHPEVKKQESNHVQIH 161
Query: 197 -CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSM 255
C++ + R C + NV + S +K + + D+EDLV G R C YY +R++
Sbjct: 162 MCRMKVTTRT--CHFYNNVEE----KSTEKELINPILDVEDLVKSGNKHRVCPYYLSRTL 215
Query: 256 ADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKL 315
A ++F PY+Y+++ R A +D+KG ++ILDEAHN+E + S D+ L
Sbjct: 216 KQQADIIFMPYNYLLDSKSRRAHNLDLKGTVVILDEAHNVEKQCEELASFDLTP---YDL 272
Query: 316 QMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRELQEA 375
++ + V +E + + + EF F+ L E
Sbjct: 273 ASAMDAISIV------------------LEEQAKKVQQNEFNSEFNMERVSSELNMEVED 314
Query: 376 NISRQCFPILLECATKAIKEATDTE------SELPHLSGMSVIT-------LEGLFSSLT 422
+ +LLE A A++ A D S + L + IT LE L
Sbjct: 315 IAKIKKILLLLEDAIDAVELAPDGSGITKDGSYIFDLFAKAQITFQTYSSILESLEQIQQ 374
Query: 423 YFFSRNGSHVSDYQL-----ALQKYIKRDSKNPGGN-----WTHT--------LSLWCLN 464
Y R G + L +Q +I DS N W + LS WC +
Sbjct: 375 YLAGRTGIFTNTAGLHKCTDIIQVHIHPDSSNQRKKQRTDLWNSSVTKKQGKVLSYWCFS 434
Query: 465 PAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVIST 523
P ++ + +IILTSGTLSP++SF+ E+ + F CLE PHVID QV ++
Sbjct: 435 PGYSMHELVRQGVRTIILTSGTLSPLSSFTMEMQIPFPICLENPHVIDKH-QVWVGILPK 493
Query: 524 GPDNYPLNASYKTA----------------------------DGYKLMEKLCNRWRETGQ 555
GPD L+++Y+ Y +M+K W++
Sbjct: 494 GPDGGLLSSTYEKRFSPECLSSLGKTIGNLVKIIPHGLLVFFPSYPVMDKSLEYWKDHRF 553
Query: 556 WSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIES 615
++ A KP+FVEP+ ++ F V+ YY I C
Sbjct: 554 VEKIEAVKPIFVEPR--NKGTFTEVIDAYYEKIV----C--------------------- 586
Query: 616 QENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKKYNDTYRS 660
KGA FLAVCRGK I+ G+PFP D +V LK ++ D R+
Sbjct: 587 ---PKAKGAVFLAVCRGKASEGLDFADTNGRGVIITGLPFPPRLDPRVVLKMQFLDEMRA 643
Query: 661 ---SKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLR 717
LSGN WY QA RA+NQAIGR IRHR D+GAI L D RF RA + W+R
Sbjct: 644 RSGGGQFLSGNSWYKQQASRAVNQAIGRVIRHRQDFGAIFLCDHRFMNIDTRAQLPSWVR 703
Query: 718 KSIKQYDSFDASLEGLKSFFR 738
+K Y++F + + FFR
Sbjct: 704 PYVKIYENFGHVVRDVSQFFR 724
>gi|444517021|gb|ELV11342.1| Regulator of telomere elongation helicase 1 [Tupaia chinensis]
Length = 1288
Score = 315 bits (808), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 258/858 (30%), Positives = 373/858 (43%), Gaps = 202/858 (23%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+GG+ V+FP+QPY Q +M +V+ L + H LLESPTGTGK+L LLC+TLAW+
Sbjct: 6 LGGVVVDFPFQPYKCQEQYMTKVLECLQK-----KVHGLLESPTGTGKTLCLLCTTLAWR 60
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVK 139
++ + I+ P L+ G + P +A +
Sbjct: 61 EHLRDSISARKIAERVPGELFSDQALSWGNAVAVDGDP-------------IACYSD--- 104
Query: 140 KKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEECKL 199
P I YASRTHSQ++QVI E + T+YR + VL SR+ C + V+ +E+ + +
Sbjct: 105 ---IPKILYASRTHSQLTQVIGELRSTSYRPKVCVLGSREQLCIHPEVKRQESSHVQVRT 161
Query: 200 LLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVH--------------------------- 232
L G + +VR H SL ++H
Sbjct: 162 LPWVPAGGV-HLRQEWQVRLHSSLVLAFLLQIHLCRRKVASRSCHFYNNVEEWSQEQELS 220
Query: 233 ----DIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILI 288
DIEDLV G R C YY +R+ A L+F PY+Y+++P R A +D+KG ++I
Sbjct: 221 SPILDIEDLVRSGSQHRVCPYYLSRNRKQQADLIFMPYNYLLDPKSRRAHGIDLKGTVVI 280
Query: 289 LDEAHNIEDIARDAGSVDIDE----------DVLLKLQMELEQVCSVNPMIYQPLIEMTQ 338
LDEAHN+E + ++ S D+ D +L+ Q +L Q +P E++
Sbjct: 281 LDEAHNVEKMCEESASFDLTPHDVASGLDALDQVLEEQTKLAQRSESHP-------ELST 333
Query: 339 DLV--GWIERRKATLAKREFQHFFSCWT--GDKALRELQEANISRQCFPILLECATKAIK 394
D + R +A + E T G EA I+ Q +L+ + I+
Sbjct: 334 DATNSAILLRLEAAIDAVELPGDRGGVTKPGSYIFELFAEAQITFQTKDCILDSLDQVIQ 393
Query: 395 EATDTESEL-----PHL---------SGMSVIT----LEGLFSSLTYFFSRNGSHVSDYQ 436
+L P L +G V+T L+ L L FS + S
Sbjct: 394 HLAGRNVQLGPGATPPLLCCGPSSCPTGAGVLTNTAGLQRLTDILQTVFSVDPPDSSPGS 453
Query: 437 ----LALQKY----------IKRDSKNPGGNWTHT---LSLWCLNPAVVFKDVAELSL-S 478
ALQ Y ++ ++ P T T LS WC +P +++ + +
Sbjct: 454 GGGPEALQPYKLVAAGSAGAMRVRAQWPSPTLTPTGKVLSYWCFSPGHSMRELVRQGVRT 513
Query: 479 IILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASY---- 534
+ILTSGTL+P++SF+ E+ V F CLE PHVID Q+ V+ GPD L++++
Sbjct: 514 LILTSGTLAPVSSFALEMQVPFPVCLENPHVIDKH-QIWVGVVPKGPDGAQLSSAFDKRT 572
Query: 535 -----KTADG------------------------------YKLMEKLCNRWRETGQWSRL 559
A G Y +MEK WR R+
Sbjct: 573 EQPPLPGAGGDWGTRCGDLAAFAGNIARVVPHGLLVFFPSYPVMEKSLEFWRARDLTRRV 632
Query: 560 NAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENA 619
+KPLFVEP+ S+ F VL YY KRV G++
Sbjct: 633 EVQKPLFVEPR--SKGSFSEVLDAYY--------------KRVAAPGSS----------- 665
Query: 620 NKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKKYNDTYRSSKNL 664
GA+FLAVCRGK IV G+P+P D +V LK ++ D ++
Sbjct: 666 ---GATFLAVCRGKASEGLDFSDMNGRGVIVTGLPYPPRMDPRVVLKMQFLDEMKARSGA 722
Query: 665 ----LSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSI 720
LSG +WY QA RA+NQA+GR IRHR DYGAI L D RF RA + W+R +
Sbjct: 723 GGRCLSGQDWYRMQASRAVNQAVGRVIRHRHDYGAIFLCDHRFAHADARAQLPSWVRPYV 782
Query: 721 KQYDSFDASLEGLKSFFR 738
K YDSF + + FFR
Sbjct: 783 KVYDSFGHVIRDVAQFFR 800
>gi|281208566|gb|EFA82742.1| DEAD/DEAH box helicase [Polysphondylium pallidum PN500]
Length = 997
Score = 315 bits (807), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 214/684 (31%), Positives = 327/684 (47%), Gaps = 117/684 (17%)
Query: 143 TPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEECKLLLG 202
PTIF+ SRTHSQI Q+ E +KT YR M VL SR YC N + + E CK ++
Sbjct: 319 VPTIFFCSRTHSQIKQLTDELRKTPYRPRMVVLGSRDQYCVNSKLEGLYSKKERCKKMVK 378
Query: 203 DRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLV 262
D+ C F K + G H+V DIED G+ R C Y+A++SM A L+
Sbjct: 379 DKE--CI-FHRQSKTYNLATQFSGAPHQVWDIEDFRVAGKETRECPYFASKSMVPTANLI 435
Query: 263 FCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDI-----DEDVLLKLQM 317
FCPY+YII+ IR + +I+I DEAHNIED A S DI E + L+
Sbjct: 436 FCPYNYIIDMSIRSHFKDKFTNSIVIFDEAHNIEDALMSAASFDIVREDLQESIYTNLKP 495
Query: 318 ELEQVCSVNPMI--YQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRELQEA 375
+ MI + + ++ + + W+E + TL +F+ + W G + L L E
Sbjct: 496 HILDSLLPAGMIGNLKIIYQLGEGINNWLENKIKTLKDIDFEKQANVWHGVQILGILSEM 555
Query: 376 NISRQCFPILLECATKAIKEATDTESE--------------------------------- 402
I + + +L+ TK +E ++ +
Sbjct: 556 GIHKGNYRFILDTFTKITEEDSEDNNSGSSSSGSSGGNSTTGSQVNGHLMNKVRKEMGMP 615
Query: 403 -LPHLSG-----------------MSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIK 444
LP+ SG S+I E L ++ +F +V D++ LQK +
Sbjct: 616 PLPNRSGGNSNGNKRDTPDILTPKTSIIFNEILKTA--WFLFEYPEYVPDFKFVLQK--Q 671
Query: 445 RDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCL 504
+ G W H +W +NP V FK ++E + S+ILTSGTLSP++SF+SELG F
Sbjct: 672 SEIVREGTKWKHVFGIWSMNPRVAFKSISENTRSVILTSGTLSPLSSFASELGAPFPITA 731
Query: 505 EAPHVIDVDLQVLTSVISTGPDNYPLNASYKTAD-------------------------- 538
E ++ D+ +V + G +N L+A++K++D
Sbjct: 732 ELGNLEDITKRVWIGTLGFGANNTKLDATFKSSDMLVFQDALGNAILKHIELIPDGVLVF 791
Query: 539 --GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSI--SQGSKC 594
Y M+K+ RW++TG + ++ KP+F EPK +DF+ VL Y ++ +G
Sbjct: 792 FPSYFFMDKMILRWKKTGVYDLIDRIKPIFTEPKFA--KDFQPVLNDYNKAVQSKRGGLL 849
Query: 595 AVVRKKRVKREGNNDLNTIESQENANKKGASFL-AVCRGKIVVGIPFPNINDIQVSLKKK 653
+ + +V +G +F RG I++GIP+PN D+++ LKKK
Sbjct: 850 FSIYRGKVS------------------EGINFSDQFARGVIIIGIPYPNFKDLKIDLKKK 891
Query: 654 YNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHIS 713
YN+ S K +++G+ WY QA+RALNQA+GRCIRH+ D+G+I+L+DERF + S
Sbjct: 892 YNE-LNSKKGMMNGSSWYNLQAYRALNQALGRCIRHKDDFGSILLIDERFTNPSLWTNFS 950
Query: 714 KWLRKSIKQYDSFDASLEGLKSFF 737
KW R I + +SL L+ FF
Sbjct: 951 KWARVCITNNKNISSSLTSLQQFF 974
Score = 68.2 bits (165), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 43/64 (67%), Gaps = 5/64 (7%)
Query: 16 NAYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCST 75
N Y + G V+FP+QPY Q M +++ L + GH +ALLES TGTGK+LSLLC+T
Sbjct: 141 NTYLINGYNVKFPFQPYECQSTMMHQILEAL----KGGH-NALLESATGTGKTLSLLCAT 195
Query: 76 LAWQ 79
L WQ
Sbjct: 196 LEWQ 199
>gi|357454989|ref|XP_003597775.1| Regulator of telomere elongation helicase [Medicago truncatula]
gi|355486823|gb|AES68026.1| Regulator of telomere elongation helicase [Medicago truncatula]
Length = 1048
Score = 315 bits (806), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 246/822 (29%), Positives = 365/822 (44%), Gaps = 172/822 (20%)
Query: 15 LNAYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCS 74
+ Y + GI V+FPY+ Y SQLV+M +V+ +L +ALLESPTGTGK+L LLC+
Sbjct: 1 MPTYKIRGIDVDFPYEAYDSQLVYMDKVMQSLQE-----ESNALLESPTGTGKTLCLLCA 55
Query: 75 TLAWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMN 134
TLAW+++ G F S +I NG+T +V+ +
Sbjct: 56 TLAWRKSL--------------------------GSF---STGMSIKTGDNGKT-EVSSS 85
Query: 135 NKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTN---KYVRDKE 191
PTI YASRTHSQI QVI E K+T+YR M VL SR+ +C + K +R +
Sbjct: 86 QSEPGASKFPTIVYASRTHSQIRQVIQELKRTSYRPKMTVLGSREQFCIHDEVKLLRGRT 145
Query: 192 NIDEECKLLLGDR---NLGCPQFKNV-HKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGC 247
+ C+ R C F V ++ +P+L + E DIEDLVN+G+ C
Sbjct: 146 QTNA-CRFACRRRAKQKRRCNHFNQVLDYLKQNPNLGE----EPVDIEDLVNIGKTSGPC 200
Query: 248 SYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDI 307
Y+ A+ + ++F PY+Y+I+ R A+++ +ILI DEAHN+E I DA S D+
Sbjct: 201 PYHLAKELHKAVDIIFAPYNYLIDRGKRKALQISWSNSILIFDEAHNLESICADAASFDL 260
Query: 308 DEDVLLK--------LQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHF 359
+L + + +E+ N P + ++ E +
Sbjct: 261 PSWLLTACISEAQSCVDLLIERRNKSNDKSQNPDDFAILKALLLKLEKRIAEVHIESKEL 320
Query: 360 FSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVITLEGLFS 419
G L + NI+ + P L T A +T E + S ++ LE +
Sbjct: 321 GFTKPGPYIFELLADLNITHKTAPKLKSIVTDA---STLLEEDSQEKSTSNICRLETMKD 377
Query: 420 SLTYFFSRNG--SHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSL 477
L F R+G SH Y++ +++ + G + TLS WC NP + ++ A+ +
Sbjct: 378 ILDIIF-RDGRTSHAKYYRVHVKEAEAWAANGSLGKVSRTLSWWCFNPGIALEEFAKDGV 436
Query: 478 -SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKT 536
SIILTSGTLSP++SF+ EL + F LE PHVI + Q+ V+ GP N+SY+T
Sbjct: 437 RSIILTSGTLSPLDSFAEELKLDFPIRLENPHVIGPN-QIWAGVVPVGPLGRTFNSSYRT 495
Query: 537 AD----------------------------GYKLMEKLCNRWRETGQ-----WSRLNAKK 563
D Y L+E+ W+ W R+ K
Sbjct: 496 RDTMEYKQELGNAIVNLTRIVPDGLLVFFPSYYLLEQSIGCWKSLSNDGSSIWERICKNK 555
Query: 564 PLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKG 623
+EP+ S F +K Y ++ + G
Sbjct: 556 KPVIEPRESSM--FTSSIKDYLTKLN----------------------------DTTASG 585
Query: 624 ASFLAVCRGK---------------IVVGIPFPNINDIQ--------------------- 647
A F AVCRGK +V G+P+ + D +
Sbjct: 586 AVFFAVCRGKVSEGLDFADHAGRAVVVTGLPYATVTDPKSIAANSAAITAARCGAVLERY 645
Query: 648 ------VSLKKKYNDTYRSSKN----LLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAII 697
V LK++Y D ++ +L+G+EWY QA RA+NQA+GR IRHR DYGAII
Sbjct: 646 ATSHSVVRLKREYLDQQSGAQGGSFKVLTGDEWYNQQASRAVNQAVGRVIRHRHDYGAII 705
Query: 698 LLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFRD 739
DERF + ++ +SKW++ IK Y F + L FFRD
Sbjct: 706 FCDERFTQPHRQSQVSKWIQPHIKCYSRFGEVVFTLTRFFRD 747
>gi|348554129|ref|XP_003462878.1| PREDICTED: regulator of telomere elongation helicase 1-like [Cavia
porcellus]
Length = 1250
Score = 315 bits (806), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 245/816 (30%), Positives = 372/816 (45%), Gaps = 174/816 (21%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ G+ V+FP+QPY Q +M +V+ L + + +LESPTGTGK+L LLC+TLAW+
Sbjct: 6 LNGVTVDFPFQPYHCQQEYMSKVLECLQKK-----VNGILESPTGTGKTLCLLCTTLAWR 60
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVK 139
++ + I+ + L++ G A A +
Sbjct: 61 EHLRDTISARKIAERVQGELFLNQDLSSWG------------------NATAADGDSIAC 102
Query: 140 KKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE--- 196
P I YASRTHSQ++QVI+E + TAYR + VL SR+ C + V+ +E+ +
Sbjct: 103 YTDIPKIIYASRTHSQLTQVINELRNTAYRPRVCVLGSREQLCIHPEVKKQESNHVQIHL 162
Query: 197 CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMA 256
C+ + R+ C + NV + SL++ + DIEDLV G + C YY +R++
Sbjct: 163 CRKKVASRS--CHFYNNVEE----KSLEQELVTPILDIEDLVKKGSKHKVCPYYLSRNLK 216
Query: 257 DDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDI--------- 307
A L+F PY+Y+++ R A +D+KG ++I DEAHN+E + ++ S D+
Sbjct: 217 QQADLIFMPYNYLLDTKSRKAHNIDLKGTVVIFDEAHNVEKMCEESASFDLTPHDVASGL 276
Query: 308 -------DEDVLLKLQMELEQVCSVNP------MIYQPLIEMTQDLVGWIERRKATLAKR 354
+E + Q EL+ S++P M + + ++ L+ R +A +
Sbjct: 277 EAIDQVLEEQTRMAQQSELQLELSMDPTSSGLNMQLEDIAKLKMILL----RLEAAIDAV 332
Query: 355 EFQHFFSCWT--GDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSG---- 408
+ S T G EA I+ Q +LE + I+ HL+G
Sbjct: 333 QLPGDGSGVTKPGSYIFNLFAEAQITFQSKICILESLDQIIQ----------HLAGRAGV 382
Query: 409 -MSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIK---------RDSKNPGGNWTHT- 457
S L+ L + FS + + S L + ++ K R + W+ T
Sbjct: 383 FTSTAGLQKLMDIIQIVFSLDPAEGS---LGISQFYKVHIHPDTGLRKAAQRSDAWSTTA 439
Query: 458 -------LSLWCLNPAVVFKD-VAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHV 509
LS WC +P ++ V + ++ILTSGTL+P++SF+ E+ + F CLE PHV
Sbjct: 440 SRKQGKVLSYWCFSPGHSMRELVCQGVRTLILTSGTLAPLSSFALEMQIPFPVCLENPHV 499
Query: 510 IDVDLQVLTSVISTGPDNYPLNASY-------------KTAD---------------GYK 541
I+ Q+ V+ GPD L++++ KT Y
Sbjct: 500 IEKH-QLWVGVVPRGPDGAELSSAFDKRFSEECLSSLGKTLGNIARVVPHGLLVFFPSYP 558
Query: 542 LMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKR 601
+MEK WR +L A KPLFVEP+ S+ F V+ YY +R
Sbjct: 559 VMEKSLEFWRARDLARKLEALKPLFVEPR--SKVSFSEVIDAYY--------------QR 602
Query: 602 VKREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDI 646
V G++ GA+FLAVCRGK I+ G+P+P D
Sbjct: 603 VASPGSS--------------GATFLAVCRGKASEGLDFSDTNGRGVIITGLPYPPRMDP 648
Query: 647 QVSLKKKYNDTYRS----SKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDER 702
+V LK ++ D R LSG EWY QA RA+NQAIGR IRHR DYGAI L D R
Sbjct: 649 RVVLKMQFLDEMRGQNQPGSQFLSGQEWYRQQASRAVNQAIGRVIRHRHDYGAIFLCDHR 708
Query: 703 FQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
F +A + W+R +K YD+F + + FFR
Sbjct: 709 FTYADAKAQLPSWVRPYLKVYDNFGHVIRDVAQFFR 744
>gi|395829361|ref|XP_003787828.1| PREDICTED: regulator of telomere elongation helicase 1 [Otolemur
garnettii]
Length = 1303
Score = 315 bits (806), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 243/813 (29%), Positives = 365/813 (44%), Gaps = 166/813 (20%)
Query: 22 GIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQN 81
G+ V+FP++PY Q +M +V+ L + + +LESPTGTGK+L LLC+TLAW+++
Sbjct: 8 GVTVDFPFRPYRCQQEYMTKVLECLQK-----RVNGILESPTGTGKTLCLLCTTLAWREH 62
Query: 82 CKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKK 141
+ I+ + L++ G A +A + V
Sbjct: 63 LRDSVSARKIAERVQGELFLDRALSSWG------------------NAAIAGGDPIVCYT 104
Query: 142 MTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE---CK 198
P I YASRTHSQ++QVISE + T+YR + VL SR+ C + V+ +E+ + C+
Sbjct: 105 DIPKIIYASRTHSQLTQVISELRNTSYRPKVCVLGSREQLCIHPEVKKQESNHMQIHLCR 164
Query: 199 LLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADD 258
+ R+ C + NV + SL++ + DIEDLV G R C YY +RS+
Sbjct: 165 KKVASRS--CHFYNNVEE----KSLEQELATPILDIEDLVKSGSKHRVCPYYLSRSLKQQ 218
Query: 259 AQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQME 318
A ++F PY+Y+++ R A VD+KG ++I DEAHN+E + ++ S D+ L
Sbjct: 219 ADIIFMPYNYLLDAKSRRAHNVDLKGTVVIFDEAHNVEKMCEESASFDLTPHDLASGLDV 278
Query: 319 LEQVCSVNPMIYQP---LIEMTQD---------------LVGWIERRKATLAKREFQHFF 360
++QV M+ Q +E + D L + R + + E
Sbjct: 279 IDQVLEEQAMVAQQGELRLEFSADSSSSGLNMELEDIAKLKTILLRLEGAIDAVELPGDD 338
Query: 361 SCWT--GDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVI-----T 413
S T G EA I+ Q +L+ + I+ HL+G + +
Sbjct: 339 SGITKPGSYIFELFAEAQITFQTKGCILDSLDQIIQ----------HLAGRTRVFTNTAG 388
Query: 414 LEGLFSSLTYFFSRNGSHVSDYQLA----LQKYIKRDSKNPG--------GNWTHT---- 457
L+ L + FS + S V LQ Y + G +W T
Sbjct: 389 LQKLADIIQIVFSADMSEVGPSSAVGLGTLQSYKVHIHPDTGCQRTAPRSDSWGTTAPRK 448
Query: 458 ----LSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDV 512
LS WC +P +++ + S+ILTSGTL+P++SF+ E+ + F CLE PH+I+
Sbjct: 449 PGKVLSYWCFSPGHSMRELVRQGVHSLILTSGTLAPVSSFALEMQIPFPICLENPHIIE- 507
Query: 513 DLQVLTSVISTGPDNYPLNASY-------------KTAD---------------GYKLME 544
Q+ VI GPD L++++ KT Y +ME
Sbjct: 508 QHQIWVGVIPKGPDGAQLSSAFDKRFSEECLSSLGKTLGNIARVVPHGLLVFFPSYPVME 567
Query: 545 KLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKR 604
K WR ++ A KPLFVEP+ S+ F V+ YY ++
Sbjct: 568 KSLAFWRTRDLARKVEALKPLFVEPR--SKGSFSEVIDAYYKQVA--------------- 610
Query: 605 EGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVS 649
+ GA+FLAVCRGK I+ G+P+P D +V
Sbjct: 611 -------------SPGSSGATFLAVCRGKASEGLDFSDMNGRGVIITGLPYPPRMDPRVV 657
Query: 650 LKKKYNDTY----RSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQE 705
LK ++ D ++ LSG EWY QA RA+NQAIGR IRHR DYGA+ L D RF
Sbjct: 658 LKMQFLDEIQGQSQAGVQFLSGQEWYRQQASRAVNQAIGRVIRHRHDYGAVFLCDHRFAY 717
Query: 706 ERNRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
RA + W+R +K YDSF + + FFR
Sbjct: 718 ADARAQLPSWVRPHVKVYDSFGPMIRDVAQFFR 750
>gi|449274178|gb|EMC83461.1| Regulator of telomere elongation helicase 1, partial [Columba
livia]
Length = 1124
Score = 315 bits (806), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 251/820 (30%), Positives = 373/820 (45%), Gaps = 178/820 (21%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ GI V+FP+QPY Q +M +V+ L + + +LESPTGTGK+L LLCSTLAW+
Sbjct: 6 LNGIAVDFPFQPYPCQEAYMAKVLECLQKK-----VNGILESPTGTGKTLCLLCSTLAWR 60
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVK 139
++ K I+ NG PE P S+ G A + ++
Sbjct: 61 EHFKDTISARKIAQR-----------MNGMELFPER-----PMSSWGNAA----TDADIP 100
Query: 140 KKMT--PTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE- 196
T P I YASRTHSQ++QVI+E K T YR + VL SR+ C + V+ +E+ +
Sbjct: 101 AYYTDIPKIIYASRTHSQLTQVINELKNTVYRPKICVLGSREQLCIHPEVKRQESNHMQI 160
Query: 197 --CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARS 254
C++ + R C + NV + S +K + DIEDLV G R C YY +RS
Sbjct: 161 YMCRMKVMAR--ACHFYNNVEE----KSTEKELIESIMDIEDLVKNGNKHRACPYYLSRS 214
Query: 255 MADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDE----- 309
+ A ++F PY+Y+++ R A +D+KG ++ILDEAHN+E + ++ S D+
Sbjct: 215 LKQQADIIFMPYNYLLDSKSRRAHNLDLKGTVVILDEAHNVEKLCEESSSFDLTPYDLAS 274
Query: 310 -----DVLLK-----------------------LQMELEQVCSVNPMIYQPLIEMTQDLV 341
+V+L+ L MELE + + ++ Q +E D V
Sbjct: 275 ALDAINVVLEEQAKVVQQNEINAEFNMEMASSGLNMELEDIAKIKKILLQ--LESAIDAV 332
Query: 342 GWIERRKATLAKREFQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTES 401
+ A + K E + F + EA I+ Q LLE + ++ +
Sbjct: 333 E-LPANGAGVTK-EGSYIFDLFA---------EAQITFQTKSSLLESIEQILQFLSGRTG 381
Query: 402 ELPHLSGM--------SVITLEGLFSSLTYFFSRNGSHVSDYQLAL----QKYIKRD--- 446
+ SG+ +V ++ S + R+ S + L QK +R
Sbjct: 382 IFVNTSGLHKLSDIIQTVFNIDPPEGSTGFMPHRSISKYYKVHIHLDSNNQKKKQRTDLW 441
Query: 447 SKNPGGNWTHTLSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLE 505
+ + TLS WC +P ++ + +IILTSGTLSP++SF+ E+ + F LE
Sbjct: 442 NSSSAKKQGKTLSYWCFSPGYSMHELVRQGVRTIILTSGTLSPLSSFTMEMQIPFPVSLE 501
Query: 506 APHVIDVDLQVLTSVISTGPDNYPLNASYK---TAD------------------------ 538
PHVID Q+ +I GPD L ++Y+ + D
Sbjct: 502 NPHVIDKH-QLWVGIIPKGPDGTVLTSTYERRFSGDYLSSLGKTIGNLVRVVPHGLLVFF 560
Query: 539 -GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKG-GSQEDFEIVLKHYYNSISQGSKCAV 596
Y +M+K WRE R+ KP+FVEP+ GS + + ++
Sbjct: 561 PSYPVMDKSLEYWREHDFARRIEEVKPMFVEPRNKGSFAEVDYLM--------------- 605
Query: 597 VRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFP 641
K V + N GA+FLAVCRGK I+ G+PFP
Sbjct: 606 --DKVVCPKSN---------------GAAFLAVCRGKASEGLDFADVNGRGVIITGLPFP 648
Query: 642 NINDIQVSLKKKYNDTYRSS---KNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIIL 698
+ +V LK ++ D RSS LSG EWY QA RA+NQAIGR IRHR DYGAI L
Sbjct: 649 PRLEPRVVLKMQFLDELRSSGAGTQYLSGREWYSQQASRAVNQAIGRVIRHRQDYGAIFL 708
Query: 699 LDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
D RF R+ + W+R + YD+F ++ + FFR
Sbjct: 709 CDHRFTTGDVRSKLPSWVRPYVNVYDNFGHAVRSVSLFFR 748
>gi|194764312|ref|XP_001964274.1| GF20802 [Drosophila ananassae]
gi|229891621|sp|B3MSG8.1|RTEL1_DROAN RecName: Full=Regulator of telomere elongation helicase 1 homolog
gi|190619199|gb|EDV34723.1| GF20802 [Drosophila ananassae]
Length = 994
Score = 315 bits (806), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 242/816 (29%), Positives = 372/816 (45%), Gaps = 163/816 (19%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ GI V FP++PY Q +M +VI L +DG + +LESPTGTGK+LSLLCS+LAW
Sbjct: 6 IAGIPVHFPFEPYPVQRAYMEKVIQCL----KDG-TNGVLESPTGTGKTLSLLCSSLAWI 60
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVK 139
+ + ++Q I K P ++ NN V
Sbjct: 61 RTRQSEHQQQMIKLDKGADLL-------------GGGAGGGPELSDLAKTMGKANNWGV- 106
Query: 140 KKMTPTIFYASRTHSQISQVISEYKKTAY-RVPMAVLASRKHYCTNKYV-RDKENIDE-- 195
P + YASRTHSQ++Q + E K+TAY + VL SR C + V R+ N ++
Sbjct: 107 ----PKVIYASRTHSQLTQAMRELKRTAYSNMRSVVLGSRDQLCIHPEVSREVGNSNKVN 162
Query: 196 ECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSM 255
CKL + + C V + HP + + DIEDL+ VGQ ++ C YYA++ +
Sbjct: 163 MCKLRVHSKT--CTFQLRVESKKDHPDFRG---PSIMDIEDLIKVGQKLKMCPYYASKEL 217
Query: 256 ADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDI-DEDVLLK 314
A + F PY+Y+++P R A ++++ I+ILDEAHNIE I ++ SV I DV +
Sbjct: 218 VPQADITFMPYNYLLDPKARKANKIELGNTIVILDEAHNIEKICEESASVQIKSSDVAIA 277
Query: 315 LQ---MELEQVCSVNPMIY---QP----------LIEMTQDLVGWIERRKATLAKREFQH 358
++ ++ S +P +P L EM DL I+ A
Sbjct: 278 IEDVTHIMKAFASDSPQDMAGDEPKDFTIDDLMLLKEMLLDLEKAID---AVAVDNPIDG 334
Query: 359 FFSCWTGDKALRELQEANISRQCFPILLECATKAIKE-ATDTESELPHLSGMSVITLEGL 417
+ + L +AN + ++ K ++ ++ ++ G S L L
Sbjct: 335 --ATYPASMIYELLGKANFTYGNVATIVALLDKLVQYLMVASQQQMSLRKGGSFTLLSDL 392
Query: 418 FSSLTYFFSRNGSHVSDYQLALQKYIK-RDSKNP---------GGNWTHTLSL------- 460
LT F+ S + + + +++ +SK P G W SL
Sbjct: 393 ---LTIVFANKESVMGKVHASFKVHVQVEESKQPQGKQAPAKQAGGWLSKASLTNGSTGK 449
Query: 461 -------WCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDV 512
WC NP + + + S+ILTSGTL+P+ +EL + LE PH++D
Sbjct: 450 VAKIINFWCFNPGFGMEQLLNTQVRSVILTSGTLAPLKPLIAELAIPVAQHLENPHIVDQ 509
Query: 513 DLQVLTSVISTGPDNYPLNASYKTAD----------------------------GYKLME 544
QV +I TGPD PL ++Y D Y ++
Sbjct: 510 S-QVYVKIIGTGPDRQPLISNYTNRDNPKYISSLGQTILNVSRLVPDGLLVFFPSYPMLN 568
Query: 545 KLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKR 604
K + W+ +G W+ + +KKP+F+EP+G Q F ++ +Y +I
Sbjct: 569 KCVDAWQASGLWADIASKKPIFLEPRGKDQ--FTSTMEEFYQAIR--------------- 611
Query: 605 EGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVS 649
+ KGA F+AVCRGK I+ G+PFP + D +V
Sbjct: 612 ---------------DSKGACFMAVCRGKVSEGLDFADRNGRAVIITGLPFPPLKDPKVI 656
Query: 650 LKKKYNDTYRSSKN-LLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERN 708
LK++Y ++ R+ +N LLSGNEWY +A RA+NQAIGR IRHR DYGAI+L D RF++
Sbjct: 657 LKRRYLESNRTRENQLLSGNEWYNLEATRAVNQAIGRVIRHRNDYGAILLCDSRFKDAAQ 716
Query: 709 RAHISKWLRKSI---KQYDSFDASLEGLKSFFRDVK 741
+SKW+R + Q F + L+ FF++ +
Sbjct: 717 VQQLSKWIRGHLGDRPQCSPFGPIVRELRQFFKNAE 752
>gi|195470104|ref|XP_002099973.1| GE16425 [Drosophila yakuba]
gi|229891631|sp|B4PZB4.1|RTEL1_DROYA RecName: Full=Regulator of telomere elongation helicase 1 homolog
gi|194187497|gb|EDX01081.1| GE16425 [Drosophila yakuba]
Length = 985
Score = 314 bits (804), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 241/819 (29%), Positives = 367/819 (44%), Gaps = 167/819 (20%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ GI V FP++PY Q +M +VI L RDG + +LESPTGTGK+LSLLCS+LAW
Sbjct: 6 IAGIPVHFPFEPYPVQRAYMEKVIQCL----RDG-TNGVLESPTGTGKTLSLLCSSLAWI 60
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVK 139
+ + ++Q + K D F + + NN V
Sbjct: 61 RTRQSEHQQQMVKMEKAD-------------FTGLGGGAAGGDLSELAKTMGRANNWGV- 106
Query: 140 KKMTPTIFYASRTHSQISQVISEYKKTAY-RVPMAVLASRKHYCTNKYV-RDKENIDEE- 196
P + YASRTHSQ++Q + E K+TAY + VL SR C + V R++ N ++
Sbjct: 107 ----PKVIYASRTHSQLTQAMRELKRTAYANMRSVVLGSRDQLCIHPEVMREQGNSNKTN 162
Query: 197 -CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSM 255
CKL + + C V + HP L+ + DIEDLV VGQ ++ C Y+A+R +
Sbjct: 163 MCKLRVHSKT--CSFQMRVESRKDHPDLRGPS---IMDIEDLVKVGQRLKICPYFASREL 217
Query: 256 ADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKL 315
A + F PY+Y+++P R A ++++ I+ILDEAHNIE I ++ SV I +
Sbjct: 218 VPQADITFMPYNYLLDPKARKANKIELGNTIVILDEAHNIEKICEESASVQIKSS---DV 274
Query: 316 QMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAK--------REFQHFFSCWTGDK 367
M +E V I Q +G E + TL EF+ +
Sbjct: 275 AMAIEDVTH----IMQVFASGESQDMGGDEPKDFTLDDLTLLKEMLLEFEKAIDAVVVEN 330
Query: 368 ALRE-----------LQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVITLEG 416
A+ L +AN + ++ K ++ ++ G + L
Sbjct: 331 AVEGTTFPASMMYELLGKANFTYGNVATIVSLLDKLVQYLLVASQQMTIRKGGTFTMLSD 390
Query: 417 LFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPG----------GNW------------ 454
L LT F+ +S + + +++ + G G W
Sbjct: 391 L---LTIVFANKEDVMSKVYASFKVHVQLEEVKQGHGKQQGGKQHGGWLGKGTIAAATGS 447
Query: 455 ---THTLSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVI 510
++ WC NP + + + S+ILTSGTL+P+ +EL + LE PH++
Sbjct: 448 IKVAKIINFWCFNPGFGMEQLLNTQVRSVILTSGTLAPLKPLIAELAIPVAQHLENPHIV 507
Query: 511 DVDLQVLTSVISTGPD------NYP---------------LNASYKTADG-------YKL 542
D QV +I TGPD NY LN S DG Y +
Sbjct: 508 DQS-QVYVKIIGTGPDRQQLISNYANRDNPKYISSLGQTILNVSRIVPDGLLVFFPSYPM 566
Query: 543 MEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRV 602
+ K + W+ +G W+ ++ KKP+F+EP+ S++ F ++ +Y +I
Sbjct: 567 LNKCVDAWQASGLWADISVKKPIFLEPR--SKDQFTSTMEEFYQAIR------------- 611
Query: 603 KREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQ 647
+ KGA F+AVCRGK I+ G+PFP + D +
Sbjct: 612 -----------------DSKGAVFMAVCRGKVSEGLDFADRNGRAVIITGLPFPPLKDPK 654
Query: 648 VSLKKKYNDTYRSSKN-LLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEE 706
V LK++Y + R+ +N LLSG EWY A RA+NQAIGR IRHR DYGAI+L D RF++
Sbjct: 655 VILKRRYLEANRTRENQLLSGQEWYNLDATRAVNQAIGRVIRHRNDYGAILLCDSRFKDA 714
Query: 707 RNRAHISKWLRKSI---KQYDSFDASLEGLKSFFRDVKG 742
+SKW+R + Q F + L+ FF++ +
Sbjct: 715 SQVQQLSKWIRGHLGDRPQCSPFGPIVRELRQFFKNAEA 753
>gi|300707205|ref|XP_002995821.1| hypothetical protein NCER_101193 [Nosema ceranae BRL01]
gi|239605041|gb|EEQ82150.1| hypothetical protein NCER_101193 [Nosema ceranae BRL01]
Length = 695
Score = 314 bits (804), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 224/761 (29%), Positives = 377/761 (49%), Gaps = 116/761 (15%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ GI V+FPY+PY SQ M ++++ + ++ESPTGTGKSLS+LC+ LA++
Sbjct: 6 IKGISVDFPYEPYESQKQTMEKILTCMMEGST-----GMIESPTGTGKSLSILCAVLAYK 60
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVK 139
++ K N I KP + + D + ES+ S I N T + A N+ + K
Sbjct: 61 EHIKRNN----IPLHKPPKKPLLDA-------VDESKQSDINELLNA-TQEKAENDNDFK 108
Query: 140 KKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEECKL 199
IF SRTH Q+ Q++ + KT Y+ +++LASR YC + +++
Sbjct: 109 ------IFICSRTHKQLDQLVQQLNKTRYKPRISILASRNQYCIHPKLQN---------- 152
Query: 200 LLGDRNLGCPQF--KN-VHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMA 256
+ D+ C ++ KN + V G L K + DIE++V G+ GC Y+AAR +A
Sbjct: 153 -VTDKASACSEYIKKNQCNYVNGKDRLAKRVGQNIFDIEEIVREGKRCGGCPYFAARKLA 211
Query: 257 DDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQ 316
DDA ++F PY+Y+++ +RG +++ +I+I+DEAHNI+D+ R +GS+++ +++ +
Sbjct: 212 DDADIIFAPYNYLLDRNVRGNTAIELSNSIIIIDEAHNIDDVCRSSGSIELTSNIIDIIV 271
Query: 317 MELEQVCSVNPMI------YQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALR 370
EL + + Y L+E+ + LV +E+ + F + LR
Sbjct: 272 NELLNAVKKSAYLGETKGDYLILLELFRKLVFNVEKVTS----------FDKTNKNVKLR 321
Query: 371 ELQEANISRQCFPILLEC--------ATKAIKEATDTESELPHLSGMSVI-TLEGLFSSL 421
+ NI + + + C A I++ D +S L +S +I TL+ + S L
Sbjct: 322 IRKGKNIKNELIEMTITCEFMTQFKNAIYGIEQVQDGKS-LVSVSTWHIIETLDSILSPL 380
Query: 422 TYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIIL 481
+ S Y A K + G + + W ++ A VF + ++IL
Sbjct: 381 LF------SDCDVYSYAFNKC----ENDFQGRTFFSYNFWLMDGAYVFSPFVKQVKALIL 430
Query: 482 TSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTADGYK 541
SGTL+P SFSSELG +F + APH+I+ D QVL + + G L +YK A+
Sbjct: 431 LSGTLTPFVSFSSELGHKFAHQISAPHLIN-DKQVLVTCLKRGHLKQELIGTYKIAESLA 489
Query: 542 LMEKLCNRWRETGQ-----------------WSRLNAK------KPLFVEPKGGSQEDFE 578
++++ +T L+A+ LF EPK G +FE
Sbjct: 490 YLDQIARVVYDTAYKVHGHGGTLVFVPSYTFLDNLHARIKLLRLDNLFCEPKAGGINEFE 549
Query: 579 IVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGI 638
+LK Y+N I++ ++ R K + E + K +S R I VGI
Sbjct: 550 SILKKYHNRINEKKPVVLLCVYRGK-----------ASEGIDFKDSS----ARAVICVGI 594
Query: 639 PFPNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIIL 698
P+P++ D Q+ LKK++ND ++ +G WY QA RA+NQA+GR IRH+ D+G II+
Sbjct: 595 PYPSLVDPQIELKKEFNDKHKH----FNGRRWYETQALRAVNQAVGRAIRHKDDWGIIIM 650
Query: 699 LDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFRD 739
LD R+ ++R +S W+ + +K ++ +++ ++ + F D
Sbjct: 651 LDSRYSDKRVSVQLSGWVSQFLKVHNDYESCIKSINLFLSD 691
>gi|302756033|ref|XP_002961440.1| hypothetical protein SELMODRAFT_77246 [Selaginella moellendorffii]
gi|300170099|gb|EFJ36700.1| hypothetical protein SELMODRAFT_77246 [Selaginella moellendorffii]
Length = 787
Score = 313 bits (803), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 240/805 (29%), Positives = 361/805 (44%), Gaps = 167/805 (20%)
Query: 15 LNAYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCS 74
+ +Y + G+ V FPY Y QLV+M VI+ L + Q +ALLESPTGTGK+L LLC+
Sbjct: 2 MPSYKLKGVDVRFPYDAYDCQLVYMESVIAALQKGQ-----NALLESPTGTGKTLCLLCA 56
Query: 75 TLAWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMN 134
TLAW++ S + PD G SQ S + P+++ + ++
Sbjct: 57 TLAWRE-----------SLAPPD---------RGRRMSASSQSSDLDPTSSQEANKL--- 93
Query: 135 NKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENID 194
PT+ YASRTHSQ+ QVI E K T+YR M L SR+ C K V+
Sbjct: 94 ---------PTVIYASRTHSQLQQVIHELKATSYRPKMVALGSREQLCIEKDVQKLRGRA 144
Query: 195 EECKLLLGDRNLGCPQFKNVHK-VRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAAR 253
+ + C V++ ++ +P L +E DIEDLV +G+ C Y+ +R
Sbjct: 145 QNNACRTSCKARKCYHHTRVNEYLKNNPELG----NEPIDIEDLVRIGRTHGPCPYFLSR 200
Query: 254 SMADDAQLVFCPYSYIINPVIRGAME-VDIKGAILILDEAHNIEDIARDAGSVDIDEDVL 312
+ ++F PY+Y+I+ R ++ + + +++I DEAHN+E + DA S D+ L
Sbjct: 201 ELHGSVDMIFVPYNYLIDKENRKSLTGIRWENSVIIFDEAHNLEGVCADAASFDLPTTTL 260
Query: 313 LKLQMELEQVCSVNPMIYQPLIEMTQDLVGWIER-------------RKATLAKREFQHF 359
E Q + + Q I D G E +K + +
Sbjct: 261 SACISEAGQCVELATL--QRSISNNADKSGDSENFALLKGALLLELSKKIDDISFDSEEL 318
Query: 360 FSCWTGDKALRELQEANISRQCFPIL---LECATKAIKEATDTESELPHLSGMSVITLEG 416
G L E I+ + +L ++ A ++E + S P S + L
Sbjct: 319 GFTRPGSYIYDFLSELKITWETSTMLTDTIDSAISLLQEDSSAPSGKPKTSTCKLELLRD 378
Query: 417 LFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELS 476
F T F ++ +H + Y++++ K + S+ T S WC NP + ++ ++L
Sbjct: 379 AFR--TIFRGKDSTHATCYRVSVFKVCDKKSR--------TFSWWCFNPGIAMEEFSKLG 428
Query: 477 L-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYK 535
+ +I+LTSGTLSP+ SF+ EL + F LE PHVI + Q+ V+S+GP LN+SY+
Sbjct: 429 VRTIVLTSGTLSPLESFAIELKLPFDVRLENPHVIGAN-QIWVGVVSSGPSGRALNSSYR 487
Query: 536 TAD----------------------------GYKLMEKLCNRWRETGQ------WSRLNA 561
T D Y L+ + W+ Q W R+
Sbjct: 488 TRDSPEYKNDLGNTIVNFARIVPNGLLVFFPSYYLLNSCVDSWQTPNQVNGHTLWERICK 547
Query: 562 KKPLFVEPK-----GGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQ 616
K VEPK + EDF +K
Sbjct: 548 HKQPVVEPKESALFNQAHEDFLAKVK---------------------------------- 573
Query: 617 ENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKKYND----- 656
++ GA F AVCRGK IV G+PF D +V LK++Y D
Sbjct: 574 -DSTGTGAVFFAVCRGKVSEGLDFADETGRAVIVTGMPFAMKTDPKVRLKRQYLDEEGRR 632
Query: 657 TYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWL 716
T S++ +L+G +WY QA RA+NQA+GR IRH+ DYGAIIL DERF + ++ +S WL
Sbjct: 633 TKTSTRKVLTGEDWYVQQASRAVNQAVGRVIRHKNDYGAIILCDERFAQAGAQSQLSLWL 692
Query: 717 RKSIKQYDSFDASLEGLKSFFRDVK 741
R +K Y F + L FF+D K
Sbjct: 693 RPHVKLYSKFGDAAFTLTRFFKDKK 717
>gi|334312296|ref|XP_001375942.2| PREDICTED: regulator of telomere elongation helicase 1 [Monodelphis
domestica]
Length = 1605
Score = 313 bits (803), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 248/822 (30%), Positives = 369/822 (44%), Gaps = 180/822 (21%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ G+ V+FP+QPY Q +M +V+ L + + +LESPTGTGK+L LLC+TLAW+
Sbjct: 6 ISGVTVDFPFQPYKCQEDYMTKVLECLQKK-----VNGVLESPTGTGKTLCLLCTTLAWR 60
Query: 80 QNCKLKNQLANISHSKPDTEAVTD-PLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNV 138
++ K I+ E D P+++ G +T+G T +
Sbjct: 61 EHFKDTITARKIAERMQGVELFPDRPMSSWGN-----------AATDGDTTAYYTD---- 105
Query: 139 KKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE-- 196
P I YASRTHSQ++QVISE + T+YR + VL SR+ C N VR E+ +
Sbjct: 106 ----IPKIIYASRTHSQLTQVISELRNTSYRPKVCVLGSREQLCINPEVRKIESNHIQIH 161
Query: 197 -CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSM 255
C+ + R+ C + NV + S +K + DIEDLV G R C YY +R++
Sbjct: 162 VCRKKVSTRS--CHFYNNVEE----KSTEKELVTSILDIEDLVKSGNKHRVCPYYLSRTL 215
Query: 256 ADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDI-------- 307
A ++F PY+Y+++ R A +D+KG ++I DEAHN+E + ++ S D+
Sbjct: 216 KQQADIIFMPYNYLLDSKTRRAHNIDLKGTVVIFDEAHNVEKVCEESASFDLTPFDLASG 275
Query: 308 ---------DEDVLLK----------------LQMELEQVCSVNPMIYQPLIEMTQDLVG 342
++ LL+ L MELE + V ++ + +E D +
Sbjct: 276 LDAINQVLEEQTKLLQQNEIHAQFNMELDNSGLNMELEDIAKVKIILLK--LESVIDAIE 333
Query: 343 WIERRKATLAKREFQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESE 402
+ + K G EA+I+ Q LLE + I+
Sbjct: 334 -LPGNNTGMTK----------PGSYIFDLFAEAHITFQTKSSLLESLEQIIQFMAGRTGI 382
Query: 403 LPHLSGMS--VITLEGLFSSLTYFFSRN---GSHVSDYQLALQKYIKRDSKNPGGN---- 453
+ +G+ V ++ +FS + N G VS Y + +I DS N
Sbjct: 383 FNNTAGLQKLVDIIQIVFSIEPPEGAANLMQGHTVSKY---YKVHIHLDSSNRKKTQRTD 439
Query: 454 -WT--------HTLSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTC 503
WT LS WC +P ++ + + +IILTSGTL+P++SFS E+ + F C
Sbjct: 440 AWTAPVAKKQGKILSYWCFSPGFSMHELIQQGVRTIILTSGTLAPISSFSMEMQIPFHVC 499
Query: 504 LEAPHVIDVDLQVLTSVISTGPDNYPLNASY-------------KTAD------------ 538
LE PHVID Q+ ++ GPD L+++Y KT
Sbjct: 500 LENPHVID-QHQIWVGIVPKGPDGVLLSSAYDKRFSDECLSSLGKTIGNIARVVPHGLLV 558
Query: 539 ---GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCA 595
Y +MEK WR+ ++ K +FVEP+ S+ F V+ YY I C
Sbjct: 559 FFPSYPVMEKSLEYWRDHDFARKMEELKAIFVEPR--SKGGFTEVIDAYYEKIV----C- 611
Query: 596 VVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPF 640
GA+F+AVCRGK I+ G+PF
Sbjct: 612 -----------------------PKSNGATFMAVCRGKASEGLDFADMNGRGVIITGLPF 648
Query: 641 PNINDIQVSLKKKYNDTYR----SSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAI 696
P D +V LK ++ D R + L+G+EWY QA RA+NQAIGR IRHR D+GAI
Sbjct: 649 PPRMDPRVILKMQFLDEMRGKSGAGGQYLTGHEWYRQQASRAVNQAIGRVIRHRQDFGAI 708
Query: 697 ILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
L D RF RA + W+R +K YD+F + FFR
Sbjct: 709 FLCDHRFTNSDARAQLPSWVRPYVKVYDNFGHIIRDAAQFFR 750
>gi|148675458|gb|EDL07405.1| regulator of telomere elongation helicase 1 [Mus musculus]
Length = 1273
Score = 313 bits (803), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 242/806 (30%), Positives = 368/806 (45%), Gaps = 161/806 (19%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ G+ V+FP+QPY Q +M +V+ L + + +LESPTGTGK+L LLCSTLAWQ
Sbjct: 6 LNGVTVDFPFQPYPCQQEYMTKVLECLQKK-----VNGILESPTGTGKTLCLLCSTLAWQ 60
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVK 139
Q+ L++ ++++ ++ Q T A + +
Sbjct: 61 QH--LRDAVSSLKIAE------------------RVQGELFASRTLSSWGSAAAASGDSI 100
Query: 140 KKMT--PTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE- 196
+ T P I YASRTHSQ++QVI E + TAYR + VL SR+ C + V+ +E+ +
Sbjct: 101 ECYTDIPKIIYASRTHSQLTQVIRELRNTAYRPKVCVLGSREQLCIHPEVKKQESNHMQI 160
Query: 197 --CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARS 254
C+ + R+ C + NV L++ + DIEDLV G + C YY +R+
Sbjct: 161 SLCRKKVASRS--CHFYNNVEA----KFLEQDLATPILDIEDLVKNGSKQKMCPYYLSRN 214
Query: 255 MADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDID-EDVLL 313
M A ++F PY+Y+++ R A +D+KG ++I DEAHN+E I ++ S D+ DV
Sbjct: 215 MKQQADIIFMPYNYLLDAKSRKAHSIDLKGTVVIFDEAHNVEKICEESASFDLTPRDVAS 274
Query: 314 KLQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRE-- 371
L++ + QV + Q E+ Q+ + L E D+ + +
Sbjct: 275 GLEI-INQVLEEQARVTQ-QGELQQEFIVDTSSSVILLRLEEAIDAVQLPGDDRGVTKPG 332
Query: 372 ------LQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVI-----TLEGLFSS 420
EA I+ Q +LE + I+ HL+G + + L+ L
Sbjct: 333 SYIFELFAEAQITFQTKGCILESLDQIIQ----------HLAGRTGVFTNTAGLQKLMDI 382
Query: 421 LTYFFSRN---GSHVSDYQLALQKYIK---------RDSKNPGGNWTHT--------LSL 460
+ FS + GS S L + K R + W+ T LS
Sbjct: 383 IQIVFSVDPPEGSPGSLVGLGISHSYKVHIHPETSHRRAAKRSDAWSTTASRKQGKVLSY 442
Query: 461 WCLNPAVVFKD-VAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTS 519
WC +P+ ++ V + ++ILTSGTL+P++SF+ E+ + F CLE PH+ID + Q+
Sbjct: 443 WCFSPSQSMRELVCQGVRTLILTSGTLAPLSSFALEMQIPFPVCLENPHIIDKN-QLWVG 501
Query: 520 VISTGPDNYPLNASYKTA----------------------------DGYKLMEKLCNRWR 551
++ GPD L+++Y Y +MEK W+
Sbjct: 502 IVPRGPDGVQLSSAYDKRFSEECLSSLGKALSNIARVVPHGLLVFFPSYPVMEKSLEFWQ 561
Query: 552 ETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLN 611
G ++ A KPLFVEP+ ++ F V+ YY ++
Sbjct: 562 VQGLARKVEALKPLFVEPR--NKGSFSEVIDAYYQQVA---------------------- 597
Query: 612 TIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKKYND 656
+ GA+FLAVCRGK IV G+P+P D +V LK ++ D
Sbjct: 598 ------SPASNGATFLAVCRGKASEGLDFSDMNGRGVIVTGLPYPPRMDPRVVLKMQFLD 651
Query: 657 TYRSSKNL----LSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHI 712
R + LSG EWY QA RA+NQAIGR IRHR DYGAI L D RF RA +
Sbjct: 652 EMRGRSGVGGQCLSGQEWYQQQASRAVNQAIGRVIRHRHDYGAIFLCDHRFAYADARAQL 711
Query: 713 SKWLRKSIKQYDSFDASLEGLKSFFR 738
W+R +K YD+F + + FFR
Sbjct: 712 PSWVRPYLKVYDNFGHVIRDVAQFFR 737
>gi|162462746|ref|NP_001104820.1| FancJ-like protein [Bombyx mori]
gi|161339205|dbj|BAF94023.1| FancJ-like protein [Bombyx mori]
Length = 851
Score = 313 bits (802), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 235/797 (29%), Positives = 369/797 (46%), Gaps = 140/797 (17%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ G++V P PYG+Q + +VI T+ AQ + LLESPTG+GK+L+LLC TLAW
Sbjct: 66 IAGVKVNLPVNPYGTQKALIHQVIKTIKAAQ-----NCLLESPTGSGKTLALLCGTLAWL 120
Query: 80 Q-------NCKLKNQLANISHSKPDTEA--------VTDPLANGGGFI-PESQPSTI--- 120
Q ++++ I +K D A V +P + F PE +I
Sbjct: 121 QAEIERINKLQMESYFEEIFENKMDDSAGNANNRKHVDNPFTSEVSFAKPEYGKKSIYSS 180
Query: 121 PPSTNGQTAQVAM-------NNKNV--------------KKKMTPTIFYASRTHSQISQV 159
P + AM N N+ K + P ++Y +RTH Q+ QV
Sbjct: 181 PKKFDSSPRHYAMSLGSPAENITNISDSPRSPSNSQNPPKHERVPVVYYGTRTHKQLQQV 240
Query: 160 ISEYKKTAY--RVPMAVLASRKHYCT----NKYVRDKENIDEEC-KLLLGDRNLGCPQFK 212
I E+K+T Y + M++LA R C K + K+++ EC K N PQ
Sbjct: 241 IKEFKRTVYCKEIRMSILAGRDRTCLMPFDRKVWKTKDDMCAECIKTKSSLMNASSPQTS 300
Query: 213 NVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINP 272
+ SL DIEDLV G ++ C Y+AA+SMA A+++FCPY+Y+INP
Sbjct: 301 SCKFYDNRMSLTHSNLPPAFDIEDLVEAGAKLKACPYFAAKSMAARAKIIFCPYNYLINP 360
Query: 273 VIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQVCSVNPMIYQP 332
IR M +++ I+++DE HNIEDI RD + I+ + + +L+ +
Sbjct: 361 FIRERMRINLADNIVVIDEGHNIEDICRDEATCTIERRRISEAVDQLQYA--------KR 412
Query: 333 LIEMTQDLVGWIERRKATLAKREFQHFFSC---------------WTGDKALRELQEANI 377
++M QD E + Q + C W ++ + L E I
Sbjct: 413 YVKMGQDEAARGE--TIDFFIKTLQIWDKCLIEQSDRVSRENTDMWNMNEFMAMLNENGI 470
Query: 378 SRQCFPILLECATKAIKEATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQL 437
+ + +K ++ + +L + +V LE + S+L Y F H D+
Sbjct: 471 GQNNYHNFNFHLSKLLR----MQDDLYGVGQHTVALLETMDSALGYLFKDECKHAEDFVP 526
Query: 438 ALQK-------YIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMN 490
L K Y +R ++ L C++PAV+F+ + + + SIIL SGTLSP+
Sbjct: 527 MLLKGDDSRALYRRRSYTGEFKGANISIRLLCMSPAVLFEGLTK-ARSIILASGTLSPVG 585
Query: 491 SFSSELGVQFG-TCLEAPHVIDVDLQVLTSV--------ISTGPDNYP------------ 529
S ELG +F +CL HVI + + ++ + DN
Sbjct: 586 SMKHELGAEFNVSCLN--HVISRERVWIGTLRNCESSEQLKCTKDNMEKKQVQDSIGKAI 643
Query: 530 LNASYKTADG-------YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLK 582
L T G Y M L RW++TG W +LN+ K +F E + D + ++K
Sbjct: 644 LRVCDVTPHGVLCFHSSYTSMRLLHQRWQQTGLWDKLNSLKYIFKESDNTT--DHDEIMK 701
Query: 583 HYYNS--ISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPF 640
YY++ + +G+ V + +V E + +++ R + +G+PF
Sbjct: 702 EYYSAAEVDRGAILFAVYRGKVS----------EGMDFRDRQA-------RAVVTIGVPF 744
Query: 641 PNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLD 700
P I D V+ K KYND + + K L+ G +WY QAFRA+NQAIGRC+RH D+GA++++D
Sbjct: 745 PTIGDRMVTEKMKYNDKHSNGKKLMRGWDWYNVQAFRAMNQAIGRCVRHLNDWGAVLMID 804
Query: 701 ERFQEERNRAHISKWLR 717
ER E+RN ++SKW+R
Sbjct: 805 ERIAEQRNLEYLSKWVR 821
>gi|354481991|ref|XP_003503184.1| PREDICTED: LOW QUALITY PROTEIN: regulator of telomere elongation
helicase 1-like [Cricetulus griseus]
Length = 1259
Score = 313 bits (802), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 247/820 (30%), Positives = 373/820 (45%), Gaps = 179/820 (21%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ G+ V+FP+QPY Q +M +V+ L + + +LESPTGTGK+L LLC+TLAW+
Sbjct: 6 LNGVTVDFPFQPYPCQQEYMTKVLECLQK-----KVNGILESPTGTGKTLCLLCTTLAWR 60
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVK 139
++ L++ ++++ I E + S + + A +
Sbjct: 61 EH--LRDAVSSLK-------------------IAERVQGELFASRSLSSWNAADGDSIAC 99
Query: 140 KKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE--- 196
P I YASRTHSQ++QVISE + T+YR + VL SR+ C + V+ +E+ +
Sbjct: 100 YTDIPKIIYASRTHSQLTQVISELRNTSYRPKVCVLGSREQLCIHPEVKKQESNHMQIHL 159
Query: 197 CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMA 256
C+ + R+ C + NV + SL++ + DIEDLV G + C YY +R+M
Sbjct: 160 CRKKVASRS--CHFYNNVEE----KSLEQELATPILDIEDLVKNGSKHKVCPYYLSRNMK 213
Query: 257 DDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDI--------- 307
A ++F PY+Y+++ R A +D+KG ++I DEAHN+E I ++ S D+
Sbjct: 214 QQADIIFMPYNYLLDAKSRKAHNIDLKGTVVIFDEAHNVEKICEESASFDLTPRDVASGL 273
Query: 308 -------DEDVLLKLQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFF 360
+E L Q EL+ S + P ++ +L I + K L + E
Sbjct: 274 EAINQVLEEQARLAQQGELQLEFSAD----TPSSGLSMELED-IAKLKMILLRLEGAIDA 328
Query: 361 SCWTGDK---------ALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSG--- 408
GD EA I+ Q +LE + I+ HL+G
Sbjct: 329 IQLPGDDRGVTKPGSYIFELFAEAQITFQTKGCILESLDQIIQ----------HLAGRTG 378
Query: 409 --MSVITLEGLFSSLTYFFSRN---GSHVSDYQLALQKYIK---------RDSKNPGGNW 454
++ + L+ L + FS + GS S L + K R + W
Sbjct: 379 VFINTVGLQKLMDIIQIVFSVDPPEGSPGSLVGLGVSHSYKVHIHPETSHRRAAQRSDAW 438
Query: 455 THT--------LSLWCLNPAVVFKD-VAELSLSIILTSGTLSPMNSFSSELGVQFGTCLE 505
+ T LS WC +P+ ++ V + ++ILTSGTL+P++SF+ E+ + F CLE
Sbjct: 439 STTTSRKQGKVLSYWCFSPSHSMRELVCQGVRTLILTSGTLAPLSSFALEMQIPFPVCLE 498
Query: 506 APHVIDVDLQVLTSVISTGPDNYPLNASYKTA---------------------------- 537
PH+ID + Q+ VI GPD L+++Y
Sbjct: 499 NPHIIDRN-QLWVGVIPRGPDGVQLSSAYDKRFSEECLSSLGKALGNIARVVPHGLLVFF 557
Query: 538 DGYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVV 597
Y +MEK WR R+ KPLFVEP+ ++ F V+ YY
Sbjct: 558 PSYPVMEKSLEFWRAQDLAKRVEVLKPLFVEPR--NKGSFSEVIDAYY------------ 603
Query: 598 RKKRVKREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPN 642
+RV G++ GA+FLAVCRGK IV G+P+P
Sbjct: 604 --QRVASPGSS--------------GATFLAVCRGKASEGLDFSDMNGRGVIVTGLPYPP 647
Query: 643 INDIQVSLKKKYNDTYR----SSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIIL 698
D +V LK ++ D R + LSG EWY QA RA+NQAIGR IRHR DYGAI L
Sbjct: 648 RMDPRVVLKMQFLDELRGRNRAGGQCLSGQEWYQQQASRAVNQAIGRVIRHRHDYGAIFL 707
Query: 699 LDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
D RF +A + W+R +K YD+F + + FFR
Sbjct: 708 CDHRFAYADTKAQLPSWVRPYLKVYDNFGHVIRDVSQFFR 747
>gi|344254979|gb|EGW11083.1| Regulator of telomere elongation helicase 1 [Cricetulus griseus]
Length = 1225
Score = 313 bits (801), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 247/820 (30%), Positives = 373/820 (45%), Gaps = 179/820 (21%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ G+ V+FP+QPY Q +M +V+ L + + +LESPTGTGK+L LLC+TLAW+
Sbjct: 6 LNGVTVDFPFQPYPCQQEYMTKVLECLQK-----KVNGILESPTGTGKTLCLLCTTLAWR 60
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVK 139
++ L++ ++++ I E + S + + A +
Sbjct: 61 EH--LRDAVSSLK-------------------IAERVQGELFASRSLSSWNAADGDSIAC 99
Query: 140 KKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE--- 196
P I YASRTHSQ++QVISE + T+YR + VL SR+ C + V+ +E+ +
Sbjct: 100 YTDIPKIIYASRTHSQLTQVISELRNTSYRPKVCVLGSREQLCIHPEVKKQESNHMQIHL 159
Query: 197 CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMA 256
C+ + R+ C + NV + SL++ + DIEDLV G + C YY +R+M
Sbjct: 160 CRKKVASRS--CHFYNNVEE----KSLEQELATPILDIEDLVKNGSKHKVCPYYLSRNMK 213
Query: 257 DDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDI--------- 307
A ++F PY+Y+++ R A +D+KG ++I DEAHN+E I ++ S D+
Sbjct: 214 QQADIIFMPYNYLLDAKSRKAHNIDLKGTVVIFDEAHNVEKICEESASFDLTPRDVASGL 273
Query: 308 -------DEDVLLKLQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFF 360
+E L Q EL+ S + P ++ +L I + K L + E
Sbjct: 274 EAINQVLEEQARLAQQGELQLEFSAD----TPSSGLSMELED-IAKLKMILLRLEGAIDA 328
Query: 361 SCWTGDK---------ALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSG--- 408
GD EA I+ Q +LE + I+ HL+G
Sbjct: 329 IQLPGDDRGVTKPGSYIFELFAEAQITFQTKGCILESLDQIIQ----------HLAGRTG 378
Query: 409 --MSVITLEGLFSSLTYFFSRN---GSHVSDYQLALQKYIK---------RDSKNPGGNW 454
++ + L+ L + FS + GS S L + K R + W
Sbjct: 379 VFINTVGLQKLMDIIQIVFSVDPPEGSPGSLVGLGVSHSYKVHIHPETSHRRAAQRSDAW 438
Query: 455 THT--------LSLWCLNPAVVFKD-VAELSLSIILTSGTLSPMNSFSSELGVQFGTCLE 505
+ T LS WC +P+ ++ V + ++ILTSGTL+P++SF+ E+ + F CLE
Sbjct: 439 STTTSRKQGKVLSYWCFSPSHSMRELVCQGVRTLILTSGTLAPLSSFALEMQIPFPVCLE 498
Query: 506 APHVIDVDLQVLTSVISTGPDNYPLNASYKTA---------------------------- 537
PH+ID + Q+ VI GPD L+++Y
Sbjct: 499 NPHIIDRN-QLWVGVIPRGPDGVQLSSAYDKRFSEECLSSLGKALGNIARVVPHGLLVFF 557
Query: 538 DGYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVV 597
Y +MEK WR R+ KPLFVEP+ ++ F V+ YY
Sbjct: 558 PSYPVMEKSLEFWRAQDLAKRVEVLKPLFVEPR--NKGSFSEVIDAYY------------ 603
Query: 598 RKKRVKREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPN 642
+RV G++ GA+FLAVCRGK IV G+P+P
Sbjct: 604 --QRVASPGSS--------------GATFLAVCRGKASEGLDFSDMNGRGVIVTGLPYPP 647
Query: 643 INDIQVSLKKKYNDTYR----SSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIIL 698
D +V LK ++ D R + LSG EWY QA RA+NQAIGR IRHR DYGAI L
Sbjct: 648 RMDPRVVLKMQFLDELRGRNRAGGQCLSGQEWYQQQASRAVNQAIGRVIRHRHDYGAIFL 707
Query: 699 LDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
D RF +A + W+R +K YD+F + + FFR
Sbjct: 708 CDHRFAYADTKAQLPSWVRPYLKVYDNFGHVIRDVSQFFR 747
>gi|38707234|gb|AAR27235.1| DEAH helicase isoform 2 [Mus musculus]
Length = 1203
Score = 312 bits (799), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 245/817 (29%), Positives = 372/817 (45%), Gaps = 170/817 (20%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ G+ V+FP+QPY Q +M +V+ L + + +LESPTGTGK+L LLCSTLAWQ
Sbjct: 6 LNGVTVDFPFQPYPCQQEYMTKVLECLQKK-----VNGILESPTGTGKTLCLLCSTLAWQ 60
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVK 139
Q+ L++ ++++ ++ G F + S + + +
Sbjct: 61 QH--LRDAVSSLKIAE---------RVQGELFASRTLSSWGSAAAASGDSIECYTD---- 105
Query: 140 KKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE--- 196
P I YASRTHSQ++QVI E + TAYR + VL SR+ C + V+ +E+ +
Sbjct: 106 ---IPKIIYASRTHSQLTQVIRELRNTAYRPKVCVLGSREQLCIHPEVKKQESNHMQISL 162
Query: 197 CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMA 256
C+ + R+ C + NV L++ + DIEDLV G + C YY +R+M
Sbjct: 163 CRKKVASRS--CHFYNNVEA----KFLEQDLATPILDIEDLVKNGSKQKMCPYYLSRNMK 216
Query: 257 DDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDID-EDVLLKL 315
A ++F PY+Y+++ R A +D+KG ++I DEAHN+E I ++ S D+ DV L
Sbjct: 217 QQADIIFMPYNYLLDAKSRKAHSIDLKGTVVIFDEAHNVEKICEESASFDLTPRDVASGL 276
Query: 316 QMELEQVCSVNPMIYQPLIEMTQDLV------GW------IERRKATLAKREFQHFFSCW 363
++ + QV + Q E+ Q+ + G I + K L + E
Sbjct: 277 EI-INQVLEEQARVTQQ-GELQQEFIVDTSSSGLNMELEDIAKLKMILLRLEEAIDAVQL 334
Query: 364 TGDK---------ALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVI-- 412
GD EA I+ Q +LE + I+ HL+G + +
Sbjct: 335 PGDDRGVTKPGSYIFELFAEAQITFQTKGCILESLDQIIQ----------HLAGRTRVFT 384
Query: 413 ---TLEGLFSSLTYFFSRN---GSHVSDYQLALQKYIK---------RDSKNPGGNWTHT 457
L+ L + FS + GS S L++ K R + W+ T
Sbjct: 385 NTAGLQKLMDIIQIVFSVDPPEGSPGSLVGLSISHSYKVHIHPETSHRRAAKRSDAWSTT 444
Query: 458 --------LSLWCLNPAVVFKD-VAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPH 508
LS WC +P+ ++ V + ++ILTSGTL+P++SF+ E+ + F CLE PH
Sbjct: 445 ASRKQGKVLSYWCFSPSQSMRELVCQGVRTLILTSGTLAPLSSFALEMQIPFPVCLENPH 504
Query: 509 VIDVDLQVLTSVISTGPDNYPLNASYKTA----------------------------DGY 540
+ID + Q+ ++ GPD L+++Y Y
Sbjct: 505 IIDKN-QLWVGIVPRGPDGVQLSSAYDKRFSEECLSSLGKALSNIARVVPHGLLVFFPSY 563
Query: 541 KLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKK 600
+MEK W+ G ++ A KPLFVEP+ ++ F V+ YY ++
Sbjct: 564 PVMEKSLEFWQVQGLARKVEALKPLFVEPR--NKGSFSEVIDAYYQQVA----------- 610
Query: 601 RVKREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNIND 645
+ GA+FLAVCRGK IV G+P+P D
Sbjct: 611 -----------------SPASNGATFLAVCRGKASEGLDFSDMNGRGVIVTGLPYPPRMD 653
Query: 646 IQVSLKKKYNDTYRSSKNL----LSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDE 701
+V LK ++ D R + LSG EWY QA RA+NQAIGR IRHR DYGAI L D
Sbjct: 654 PRVVLKMQFLDEMRGRSGVGGQCLSGQEWYQQQASRAVNQAIGRVIRHRHDYGAIFLCDH 713
Query: 702 RFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
RF RA + W+R +K YD+F + + FFR
Sbjct: 714 RFAYADARAQLPSWVRPYLKVYDNFGHVIRDVAQFFR 750
>gi|38707232|gb|AAR27234.1| DEAH helicase isoform 1 [Mus musculus]
Length = 1209
Score = 311 bits (798), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 245/817 (29%), Positives = 372/817 (45%), Gaps = 170/817 (20%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ G+ V+FP+QPY Q +M +V+ L + + +LESPTGTGK+L LLCSTLAWQ
Sbjct: 6 LNGVTVDFPFQPYPCQQEYMTKVLECLQKK-----VNGILESPTGTGKTLCLLCSTLAWQ 60
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVK 139
Q+ L++ ++++ ++ G F + S + + +
Sbjct: 61 QH--LRDAVSSLKIAE---------RVQGELFASRTLSSWGSAAAASGDSIECYTD---- 105
Query: 140 KKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE--- 196
P I YASRTHSQ++QVI E + TAYR + VL SR+ C + V+ +E+ +
Sbjct: 106 ---IPKIIYASRTHSQLTQVIRELRNTAYRPKVCVLGSREQLCIHPEVKKQESNHMQISL 162
Query: 197 CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMA 256
C+ + R+ C + NV L++ + DIEDLV G + C YY +R+M
Sbjct: 163 CRKKVASRS--CHFYNNVEA----KFLEQDLATPILDIEDLVKNGSKQKMCPYYLSRNMK 216
Query: 257 DDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDID-EDVLLKL 315
A ++F PY+Y+++ R A +D+KG ++I DEAHN+E I ++ S D+ DV L
Sbjct: 217 QQADIIFMPYNYLLDAKSRKAHSIDLKGTVVIFDEAHNVEKICEESASFDLTPRDVASGL 276
Query: 316 QMELEQVCSVNPMIYQPLIEMTQDLV------GW------IERRKATLAKREFQHFFSCW 363
++ + QV + Q E+ Q+ + G I + K L + E
Sbjct: 277 EI-INQVLEEQARVTQQ-GELQQEFIVDTSSSGLNMELEDIAKLKMILLRLEEAIDAVQL 334
Query: 364 TGDK---------ALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVI-- 412
GD EA I+ Q +LE + I+ HL+G + +
Sbjct: 335 PGDDRGVTKPGSYIFELFAEAQITFQTKGCILESLDQIIQ----------HLAGRTRVFT 384
Query: 413 ---TLEGLFSSLTYFFSRN---GSHVSDYQLALQKYIK---------RDSKNPGGNWTHT 457
L+ L + FS + GS S L++ K R + W+ T
Sbjct: 385 NTAGLQKLMDIIQIVFSVDPPEGSPGSLVGLSISHSYKVHIHPETSHRRAAKRSDAWSTT 444
Query: 458 --------LSLWCLNPAVVFKD-VAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPH 508
LS WC +P+ ++ V + ++ILTSGTL+P++SF+ E+ + F CLE PH
Sbjct: 445 ASRKQGKVLSYWCFSPSQSMRELVCQGVRTLILTSGTLAPLSSFALEMQIPFPVCLENPH 504
Query: 509 VIDVDLQVLTSVISTGPDNYPLNASYKTA----------------------------DGY 540
+ID + Q+ ++ GPD L+++Y Y
Sbjct: 505 IIDKN-QLWVGIVPRGPDGVQLSSAYDKRFSEECLSSLGKALSNIARVVPHGLLVFFPSY 563
Query: 541 KLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKK 600
+MEK W+ G ++ A KPLFVEP+ ++ F V+ YY ++
Sbjct: 564 PVMEKSLEFWQVQGLARKVEALKPLFVEPR--NKGSFSEVIDAYYQQVA----------- 610
Query: 601 RVKREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNIND 645
+ GA+FLAVCRGK IV G+P+P D
Sbjct: 611 -----------------SPASNGATFLAVCRGKASEGLDFSDMNGRGVIVTGLPYPPRMD 653
Query: 646 IQVSLKKKYNDTYRSSKNL----LSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDE 701
+V LK ++ D R + LSG EWY QA RA+NQAIGR IRHR DYGAI L D
Sbjct: 654 PRVVLKMQFLDEMRGRSGVGGQCLSGQEWYQQQASRAVNQAIGRVIRHRHDYGAIFLCDH 713
Query: 702 RFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
RF RA + W+R +K YD+F + + FFR
Sbjct: 714 RFAYADARAQLPSWVRPYLKVYDNFGHVIRDVAQFFR 750
>gi|222618779|gb|EEE54911.1| hypothetical protein OsJ_02439 [Oryza sativa Japonica Group]
Length = 1025
Score = 311 bits (798), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 257/820 (31%), Positives = 369/820 (45%), Gaps = 158/820 (19%)
Query: 15 LNAYHVGGIQVEFPYQPYG--SQLVFMCRVISTLDRAQRDGHC----HALLESPTGTGKS 68
+ Y + G+ V+FP P S S+ D + G +ALLESPTGTGK+
Sbjct: 1 MPVYRIRGVDVDFPTTPTTARSHTWTASSNPSSSDGGELAGSIRQGKNALLESPTGTGKT 60
Query: 69 LSLLCSTLAWQQNCK--LKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNG 126
L LLCS LAW++ L+ A + G SQPS
Sbjct: 61 LCLLCSALAWRRTFGEFLRGGGGGGGGGGGGGGAGSQQPPYG------SQPS------GS 108
Query: 127 QTAQVAMNNKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKY 186
Q + V+ + + P I YASRTHSQ+ QVI E K T+YR MAVL SR+ C ++
Sbjct: 109 QHSGVSAS----QSSRYPVIIYASRTHSQLRQVIKELKATSYRPKMAVLGSREQMCIHEE 164
Query: 187 V---RDKENIDEECKLLLGDRNLGCPQFKNVHK-VRGHPSLQKGGCHEVHDIEDLVNVGQ 242
V R ++ + C L R C +V + +R + L C DIEDLVN+G+
Sbjct: 165 VSKLRGRQQ-NNACHYLCKKR--WCRHHNSVAEFMRNNSELGSEAC----DIEDLVNIGR 217
Query: 243 VVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAME-VDIKGAILILDEAHNIEDIARD 301
C YY +R ++ ++F PY+Y+I+P R ++ + A+LI DEAHN+E I D
Sbjct: 218 TKGPCPYYISRELSKSVDILFAPYNYLIDPGNRRSLNGIPWDNAVLIFDEAHNLESICAD 277
Query: 302 AGSVDIDEDVL---LKLQMELEQVCSV------------NPMIYQPLIEMTQDLVGWIER 346
A S D+ + L + E Q+CS +P Y L + L I
Sbjct: 278 AASFDLLPNNLSSCIAEAQECIQLCSAKRTFENSADKQFDPENYAILKALLMALEKKIS- 336
Query: 347 RKATLAKREFQHFFSCWTGDKALRELQEANISRQCFPILLEC---ATKAIKEATDTESEL 403
+ + +E H G+ L E NI+ + L++ A+ ++E E+
Sbjct: 337 -EVVIDSKELGH---TKPGNYIYEFLSELNITSETSKKLIDTIDGASLLLEEGNSAETGP 392
Query: 404 PHLSGMSVITLEGLFSSLTYFFSRNG-SHVSDYQLALQKYIKRDSKNPG------GNWTH 456
+ +V LE + L F G SH Y+ ++ +N G G +
Sbjct: 393 GMKAKATVCRLETIRDILDIIFRGGGQSHAKYYRF----HVNECQQNSGDALKVLGKVSR 448
Query: 457 TLSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQ 515
TLS WC NP + ++ +L + SIILTSGTLSP++S + EL ++F LE PHVI D Q
Sbjct: 449 TLSWWCFNPGLAMEEFLKLGVRSIILTSGTLSPLDSLALELNLEFPVRLENPHVIASD-Q 507
Query: 516 VLTSVISTGPDNYPLNASYKT---------------------ADG-------YKLMEKLC 547
+ V+ GP +PLN+SY+T DG Y +M+K
Sbjct: 508 IWVGVVPVGPSGHPLNSSYRTRETLKYKQELGITIVNFARIVPDGLLVFFPSYSMMDKCI 567
Query: 548 NRWRETGQ---------WSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVR 598
N W++ W R+ K +EP+ S +F ++ Y +
Sbjct: 568 NCWKDRNHENSSDEHTIWQRICKHKQPVIEPRQSS--NFPNAIEDYAAKL---------- 615
Query: 599 KKRVKREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNI 643
+++ GA F AVCRGK IV G+PF
Sbjct: 616 ------------------RDSSTTGAIFFAVCRGKVSEGLDFADRAGRAVIVTGMPFATP 657
Query: 644 NDIQVSLKKKYNDTYRSSKN----LLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILL 699
D +V LK+ Y D S+ N L+G EWY QA RA+NQA+GR IRHR DYGAII
Sbjct: 658 TDPKVRLKRDYLDKLGSASNKNSKALTGEEWYVQQAARAVNQAVGRVIRHRHDYGAIIYC 717
Query: 700 DERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFRD 739
DERF + ++ +S WLR IK Y + ++GL FFRD
Sbjct: 718 DERFVWQNYQSQMSYWLRPYIKCYKKYGEVVQGLTRFFRD 757
>gi|50510779|dbj|BAD32375.1| mKIAA1088 protein [Mus musculus]
Length = 1211
Score = 311 bits (798), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 245/817 (29%), Positives = 371/817 (45%), Gaps = 170/817 (20%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ G+ V+FP+QPY Q +M +V+ L + + +LESPTGTGK+L LLCSTLAWQ
Sbjct: 8 LNGVTVDFPFQPYPCQQEYMTKVLECLQKK-----VNGILESPTGTGKTLCLLCSTLAWQ 62
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVK 139
Q+ L++ ++++ ++ G F + S + + +
Sbjct: 63 QH--LRDAVSSLKIAE---------RVQGELFASRTLSSWGSAAAASGDSIECYTD---- 107
Query: 140 KKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE--- 196
P I YASRTHSQ++QVI E + TAYR + VL SR+ C + V+ +E+ +
Sbjct: 108 ---IPKIIYASRTHSQLTQVIRELRNTAYRPKVCVLGSREQLCIHPEVKKQESNHMQISL 164
Query: 197 CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMA 256
C+ + R+ C + NV L++ + DIEDLV G + C YY +R+M
Sbjct: 165 CRKKVASRS--CHFYNNVEA----KFLEQDLATPILDIEDLVKNGSKQKMCPYYLSRNMK 218
Query: 257 DDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDID-EDVLLKL 315
A ++F PY+Y+++ R A +D+KG ++I DEAHN+E I ++ S D+ DV L
Sbjct: 219 QQADIIFMPYNYLLDAKSRKAHSIDLKGTVVIFDEAHNVEKICEESASFDLTPRDVASGL 278
Query: 316 QMELEQVCSVNPMIYQPLIEMTQDLV------GW------IERRKATLAKREFQHFFSCW 363
++ + QV + Q E+ Q+ + G I + K L + E
Sbjct: 279 EI-INQVLEEQARVTQQ-GELQQEFIVDTSSSGLNMELEDIAKLKMILLRLEEAIDAVQL 336
Query: 364 TGDK---------ALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVI-- 412
GD EA I+ Q +LE + I+ HL+G + +
Sbjct: 337 PGDDRGVTKPGSYIFELFAEAQITFQTKGCILESLDQIIQ----------HLAGRTGVFT 386
Query: 413 ---TLEGLFSSLTYFFSRN---GSHVSDYQLALQKYIK---------RDSKNPGGNWTHT 457
L+ L + FS + GS S L + K R + W+ T
Sbjct: 387 NTAGLQKLMDIIQIVFSVDPPEGSPGSLVGLGISHSYKVHIHPETSHRRAAKRSDAWSTT 446
Query: 458 --------LSLWCLNPAVVFKD-VAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPH 508
LS WC +P+ ++ V + ++ILTSGTL+P++SF+ E+ + F CLE PH
Sbjct: 447 ASRKQGKVLSYWCFSPSQSMRELVCQGVRTLILTSGTLAPLSSFALEMQIPFPVCLENPH 506
Query: 509 VIDVDLQVLTSVISTGPDNYPLNASYKTA----------------------------DGY 540
+ID + Q+ ++ GPD L+++Y Y
Sbjct: 507 IIDKN-QLWVGIVPRGPDGVQLSSAYDKRFSEECLSSLGKALSNIARVVPHGLLVFFPSY 565
Query: 541 KLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKK 600
+MEK W+ G ++ A KPLFVEP+ ++ F V+ YY ++
Sbjct: 566 PVMEKSLEFWQVQGLARKVEALKPLFVEPR--NKGSFSEVIDAYYQQVA----------- 612
Query: 601 RVKREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNIND 645
+ GA+FLAVCRGK IV G+P+P D
Sbjct: 613 -----------------SPASNGATFLAVCRGKASEGLDFSDMNGRGVIVTGLPYPPRMD 655
Query: 646 IQVSLKKKYNDTYRSSKNL----LSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDE 701
+V LK ++ D R + LSG EWY QA RA+NQAIGR IRHR DYGAI L D
Sbjct: 656 PRVVLKMQFLDEMRGRSGVGGQCLSGQEWYQQQASRAVNQAIGRVIRHRHDYGAIFLCDH 715
Query: 702 RFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
RF RA + W+R +K YD+F + + FFR
Sbjct: 716 RFAYADARAQLPSWVRPYLKVYDNFGHVIRDVAQFFR 752
>gi|218188567|gb|EEC70994.1| hypothetical protein OsI_02661 [Oryza sativa Indica Group]
Length = 984
Score = 311 bits (798), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 250/788 (31%), Positives = 358/788 (45%), Gaps = 159/788 (20%)
Query: 39 MCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCKLKNQLANISHSKPDT 98
M RV+ +L + + +ALLESPTGTGK+L LLCS LAW++ L
Sbjct: 1 MDRVLESLQQGK-----NALLESPTGTGKTLCLLCSALAWRRT--FGEFLRGGGGGGGGG 53
Query: 99 EAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKKMTPTIFYASRTHSQISQ 158
+ P SQPS + G +Q + P I YASRTHSQ+ Q
Sbjct: 54 GSQQPPYG--------SQPSG-SQHSGGSASQSSR---------YPVIIYASRTHSQLRQ 95
Query: 159 VISEYKKTAYRVPMAVLASRKHYCTNKYV---RDKENIDEECKLLLGDRNLGCPQFKNVH 215
VI E K T+YR MAVL SR+ C ++ V R ++ + C L R C +V
Sbjct: 96 VIKELKATSYRPKMAVLGSREQMCIHEEVSKLRGRQQ-NNACHYLCKKR--WCRHHNSVA 152
Query: 216 K-VRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVI 274
+ +R + L C DIEDLVN+G+ C YY +R ++ ++F PY+Y+I+P
Sbjct: 153 EFMRNNSELGSEAC----DIEDLVNIGRTKGPCPYYISRELSKSVDILFAPYNYLIDPGN 208
Query: 275 RGAME-VDIKGAILILDEAHNIEDIARDAGSVDIDEDVL---LKLQMELEQVCSV----- 325
R ++ + A+LI DEAHN+E I DA S D+ + L + E Q+CS
Sbjct: 209 RRSLNGIPWDNAVLIFDEAHNLESICADAASFDLLPNNLSSCIAEAQECIQLCSAKRTFE 268
Query: 326 -------NPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRELQEANIS 378
+P Y L + L I + + +E H G+ L E NI+
Sbjct: 269 NSADKQFDPENYAILKALLMALEKKIS--EVVIDSKELGH---TKPGNYIYEFLSELNIT 323
Query: 379 RQCFPILLEC---ATKAIKEATDTESELPHLSGMSVITLEGLFSSLTYFFSRNG-SHVSD 434
+ L++ A+ ++E E+ + +V LE + L F G SH
Sbjct: 324 SETSKKLIDTIDGASLLLEEGNSAETGPGMKAKATVCRLETIRDILDIIFRGGGQSHAKY 383
Query: 435 YQLALQKYIKRDSKNPG------GNWTHTLSLWCLNPAVVFKDVAELSL-SIILTSGTLS 487
Y+ ++ +N G G + TLS WC NP + ++ +L + SIILTSGTLS
Sbjct: 384 YRF----HVNECQQNSGDALKVLGKVSRTLSWWCFNPGLAMEEFLKLGVRSIILTSGTLS 439
Query: 488 PMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKT----------- 536
P++S + EL ++F LE PHVI D Q+ V+ GP +PLN+SY+T
Sbjct: 440 PLDSLALELNLEFPVRLENPHVIASD-QIWVGVVPVGPSGHPLNSSYRTRETLKYKQELG 498
Query: 537 ----------ADG-------YKLMEKLCNRWRETGQ---------WSRLNAKKPLFVEPK 570
DG Y +M+K N W++ W R+ K +EP+
Sbjct: 499 ITIVNFARIVPDGLLVFFPSYSMMDKCINCWKDRNHENSSDEHTIWQRICKHKQPVIEPR 558
Query: 571 GGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVC 630
S +F ++ Y + +++ GA F AVC
Sbjct: 559 QSS--NFPNAIEDYAAKL----------------------------RDSSTTGAIFFAVC 588
Query: 631 RGK---------------IVVGIPFPNINDIQVSLKKKYNDTYRSSKN----LLSGNEWY 671
RGK IV G+PF D +V LK+ Y D S+ N L+G EWY
Sbjct: 589 RGKVSEGLDFADRAGRAVIVTGMPFATPTDPKVRLKRDYLDKLGSASNKNSKALTGEEWY 648
Query: 672 CNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLE 731
QA RA+NQA+GR IRHR DYGAII DERF + ++ +S WLR IK Y + ++
Sbjct: 649 VQQAARAVNQAVGRVIRHRHDYGAIIYCDERFVWQNYQSQMSYWLRPYIKCYKKYGEVVQ 708
Query: 732 GLKSFFRD 739
GL FFRD
Sbjct: 709 GLTRFFRD 716
>gi|262263443|ref|NP_001160137.1| regulator of telomere elongation helicase 1 isoform 2 [Mus
musculus]
gi|229891754|sp|Q0VGM9.2|RTEL1_MOUSE RecName: Full=Regulator of telomere elongation helicase 1
gi|148878220|gb|AAI45659.1| Rtel1 protein [Mus musculus]
gi|219519260|gb|AAI44979.1| Rtel1 protein [Mus musculus]
Length = 1203
Score = 311 bits (797), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 246/819 (30%), Positives = 371/819 (45%), Gaps = 174/819 (21%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ G+ V+FP+QPY Q +M +V+ L + + +LESPTGTGK+L LLCSTLAWQ
Sbjct: 6 LNGVTVDFPFQPYPCQQEYMTKVLECLQKK-----VNGILESPTGTGKTLCLLCSTLAWQ 60
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVK 139
Q+ L++ ++++ ++ Q T A + +
Sbjct: 61 QH--LRDAVSSLKIAE------------------RVQGELFASRTLSSWGSAAAASGDSI 100
Query: 140 KKMT--PTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE- 196
+ T P I YASRTHSQ++QVI E + TAYR + VL SR+ C + V+ +E+ +
Sbjct: 101 ECYTDIPKIIYASRTHSQLTQVIRELRNTAYRPKVCVLGSREQLCIHPEVKKQESNHMQI 160
Query: 197 --CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARS 254
C+ + R+ C + NV L++ + DIEDLV G + C YY +R+
Sbjct: 161 SLCRKKVASRS--CHFYNNVEA----KFLEQDLATPILDIEDLVKNGSKQKMCPYYLSRN 214
Query: 255 MADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDID-EDVLL 313
M A ++F PY+Y+++ R A +D+KG ++I DEAHN+E I ++ S D+ DV
Sbjct: 215 MKQQADIIFMPYNYLLDAKSRKAHSIDLKGTVVIFDEAHNVEKICEESASFDLTPRDVAS 274
Query: 314 KLQMELEQVCSVNPMIYQPLIEMTQDLV------GW------IERRKATLAKREFQHFFS 361
L++ + QV + Q E+ Q+ + G I + K L + E
Sbjct: 275 GLEI-INQVLEEQARVTQQ-GELQQEFIVDTSSSGLNMELEDIAKLKMILLRLEEAIDAV 332
Query: 362 CWTGDK---------ALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVI 412
GD EA I+ Q +LE + I+ HL+G + +
Sbjct: 333 QLPGDDRGVTKPGSYIFELFAEAQITFQTKGCILESLDQIIQ----------HLAGRTGV 382
Query: 413 -----TLEGLFSSLTYFFSRN---GSHVSDYQLALQKYIK---------RDSKNPGGNWT 455
L+ L + FS + GS S L + K R + W+
Sbjct: 383 FTNTAGLQKLMDIIQIVFSVDPPEGSPGSLVGLGISHSYKVHIHPETSHRRAAKRSDAWS 442
Query: 456 HT--------LSLWCLNPAVVFKD-VAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEA 506
T LS WC +P+ ++ V + ++ILTSGTL+P++SF+ E+ + F CLE
Sbjct: 443 TTASRKQGKVLSYWCFSPSQSMRELVCQGVRTLILTSGTLAPLSSFALEMQIPFPVCLEN 502
Query: 507 PHVIDVDLQVLTSVISTGPDNYPLNASYKTA----------------------------D 538
PH+ID + Q+ ++ GPD L+++Y
Sbjct: 503 PHIIDKN-QLWVGIVPRGPDGVQLSSAYDKRFSEECLSSLGKALSNIARVVPHGLLVFFP 561
Query: 539 GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVR 598
Y +MEK W+ G ++ A KPLFVEP+ ++ F V+ YY ++
Sbjct: 562 SYPVMEKSLEFWQVQGLARKVEALKPLFVEPR--NKGSFSEVIDAYYQQVA--------- 610
Query: 599 KKRVKREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNI 643
+ GA+FLAVCRGK IV G+P+P
Sbjct: 611 -------------------SPASNGATFLAVCRGKASEGLDFSDMNGRGVIVTGLPYPPR 651
Query: 644 NDIQVSLKKKYNDTYRSSKNL----LSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILL 699
D +V LK ++ D R + LSG EWY QA RA+NQAIGR IRHR DYGAI L
Sbjct: 652 MDPRVVLKMQFLDEMRGRSGVGGQCLSGQEWYQQQASRAVNQAIGRVIRHRHDYGAIFLC 711
Query: 700 DERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
D RF RA + W+R +K YD+F + + FFR
Sbjct: 712 DHRFAYADARAQLPSWVRPYLKVYDNFGHVIRDVAQFFR 750
>gi|262263441|ref|NP_001001882.3| regulator of telomere elongation helicase 1 isoform 1 [Mus
musculus]
Length = 1209
Score = 311 bits (797), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 246/819 (30%), Positives = 371/819 (45%), Gaps = 174/819 (21%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ G+ V+FP+QPY Q +M +V+ L + + +LESPTGTGK+L LLCSTLAWQ
Sbjct: 6 LNGVTVDFPFQPYPCQQEYMTKVLECLQKK-----VNGILESPTGTGKTLCLLCSTLAWQ 60
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVK 139
Q+ L++ ++++ ++ Q T A + +
Sbjct: 61 QH--LRDAVSSLKIAE------------------RVQGELFASRTLSSWGSAAAASGDSI 100
Query: 140 KKMT--PTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE- 196
+ T P I YASRTHSQ++QVI E + TAYR + VL SR+ C + V+ +E+ +
Sbjct: 101 ECYTDIPKIIYASRTHSQLTQVIRELRNTAYRPKVCVLGSREQLCIHPEVKKQESNHMQI 160
Query: 197 --CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARS 254
C+ + R+ C + NV L++ + DIEDLV G + C YY +R+
Sbjct: 161 SLCRKKVASRS--CHFYNNVEA----KFLEQDLATPILDIEDLVKNGSKQKMCPYYLSRN 214
Query: 255 MADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDID-EDVLL 313
M A ++F PY+Y+++ R A +D+KG ++I DEAHN+E I ++ S D+ DV
Sbjct: 215 MKQQADIIFMPYNYLLDAKSRKAHSIDLKGTVVIFDEAHNVEKICEESASFDLTPRDVAS 274
Query: 314 KLQMELEQVCSVNPMIYQPLIEMTQDLV------GW------IERRKATLAKREFQHFFS 361
L++ + QV + Q E+ Q+ + G I + K L + E
Sbjct: 275 GLEI-INQVLEEQARVTQQ-GELQQEFIVDTSSSGLNMELEDIAKLKMILLRLEEAIDAV 332
Query: 362 CWTGDK---------ALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVI 412
GD EA I+ Q +LE + I+ HL+G + +
Sbjct: 333 QLPGDDRGVTKPGSYIFELFAEAQITFQTKGCILESLDQIIQ----------HLAGRTGV 382
Query: 413 -----TLEGLFSSLTYFFSRN---GSHVSDYQLALQKYIK---------RDSKNPGGNWT 455
L+ L + FS + GS S L + K R + W+
Sbjct: 383 FTNTAGLQKLMDIIQIVFSVDPPEGSPGSLVGLGISHSYKVHIHPETSHRRAAKRSDAWS 442
Query: 456 HT--------LSLWCLNPAVVFKD-VAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEA 506
T LS WC +P+ ++ V + ++ILTSGTL+P++SF+ E+ + F CLE
Sbjct: 443 TTASRKQGKVLSYWCFSPSQSMRELVCQGVRTLILTSGTLAPLSSFALEMQIPFPVCLEN 502
Query: 507 PHVIDVDLQVLTSVISTGPDNYPLNASYKTA----------------------------D 538
PH+ID + Q+ ++ GPD L+++Y
Sbjct: 503 PHIIDKN-QLWVGIVPRGPDGVQLSSAYDKRFSEECLSSLGKALSNIARVVPHGLLVFFP 561
Query: 539 GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVR 598
Y +MEK W+ G ++ A KPLFVEP+ ++ F V+ YY ++
Sbjct: 562 SYPVMEKSLEFWQVQGLARKVEALKPLFVEPR--NKGSFSEVIDAYYQQVA--------- 610
Query: 599 KKRVKREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNI 643
+ GA+FLAVCRGK IV G+P+P
Sbjct: 611 -------------------SPASNGATFLAVCRGKASEGLDFSDMNGRGVIVTGLPYPPR 651
Query: 644 NDIQVSLKKKYNDTYRSSKNL----LSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILL 699
D +V LK ++ D R + LSG EWY QA RA+NQAIGR IRHR DYGAI L
Sbjct: 652 MDPRVVLKMQFLDEMRGRSGVGGQCLSGQEWYQQQASRAVNQAIGRVIRHRHDYGAIFLC 711
Query: 700 DERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
D RF RA + W+R +K YD+F + + FFR
Sbjct: 712 DHRFAYADARAQLPSWVRPYLKVYDNFGHVIRDVAQFFR 750
>gi|402881970|ref|XP_003904529.1| PREDICTED: regulator of telomere elongation helicase 1 [Papio
anubis]
Length = 1301
Score = 311 bits (797), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 245/813 (30%), Positives = 370/813 (45%), Gaps = 166/813 (20%)
Query: 22 GIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQN 81
G+ ++FP+QPY Q +M +V+ L + + +LESPTGTGK+L LLC+TLAWQ++
Sbjct: 8 GVTIDFPFQPYKCQQEYMTKVLECLQQ-----KVNGILESPTGTGKTLCLLCTTLAWQEH 62
Query: 82 CKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKK 141
L + ++ E V G P S+ G TA A +
Sbjct: 63 ------LRDTISARKIAERVQ------GELFPNQALSSW-----GNTAAAAEDPIACYTD 105
Query: 142 MTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE---CK 198
+ P I YASRTHSQ++QVI+E + T+YR + VL SR+ C + V+ +E+ + C+
Sbjct: 106 I-PKIIYASRTHSQLTQVINELRNTSYRPKVCVLGSREQLCIHPEVKKQESNHMQIHLCR 164
Query: 199 LLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADD 258
+ R+ C + NV + L++ + DIEDLV G R C YY +R++
Sbjct: 165 KKVASRS--CHFYNNVEEK----GLEQELASPILDIEDLVKSGSKHRVCPYYLSRNLKQQ 218
Query: 259 AQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDE--------- 309
A +VF PY+Y+++ R A +D+KG ++I DEAHN+E + ++ S D+
Sbjct: 219 ADIVFMPYNYLLDAKSRRAHSIDLKGTVVIFDEAHNVEKMCEESASFDLTPHDLASGLDV 278
Query: 310 -DVLLKLQMELEQVCSVNPMIY----QPLIEMTQDLVGWIE----RRKATLAKREFQHFF 360
D +L+ Q + Q+ +P P + M + + ++ R + + E
Sbjct: 279 IDQVLEEQTKTAQLGEPHPEFSTDSPSPGLNMELEDIAKLKMILLRLEGAIDAVELPGDD 338
Query: 361 SCWT--GDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVI-----T 413
S T G EA I+ Q +L+ + I+ HL+G + +
Sbjct: 339 SGVTKPGSYIFELFAEAQITFQTKGCILDSLDQIIQ----------HLAGRAGVFTNTAG 388
Query: 414 LEGLFSSLTYFFSRN---GSHVSDYQLA-LQKYI--------KRDSKNPGGNWTHT---- 457
L+ L + FS + GS S L LQ Y R + W+ T
Sbjct: 389 LQKLADIIQIVFSVDPSEGSRGSPAGLGPLQSYKVHIHPDAGHRRTAQRSDAWSTTAARK 448
Query: 458 ----LSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDV 512
LS WC +P +++ + S+ILTSGTL+P++SF+ E+ + F CLE PH+ID
Sbjct: 449 RGKVLSYWCFSPGHSMRELVRQGVRSLILTSGTLAPVSSFALEMQIPFPVCLENPHIIDK 508
Query: 513 DLQVLTSVISTGPDNYPLNASYKTA----------------------------DGYKLME 544
Q+ V+ GPD L++++ Y +ME
Sbjct: 509 H-QIWVGVVPRGPDGAQLSSAFDRRFSEECLSSLGKALGNIARVVPYGLLIFFPSYPVME 567
Query: 545 KLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKR 604
K WR ++ A KPLFVEP+ S+ F + YY RV
Sbjct: 568 KSLEFWRARDLARKMEALKPLFVEPR--SKGSFSETISAYY--------------ARVAA 611
Query: 605 EGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVS 649
G+ GA+FLAVCRGK IV G+P+P D +V
Sbjct: 612 PGST--------------GATFLAVCRGKASEGLDFSDTNGRGVIVTGLPYPPRMDPRVV 657
Query: 650 LKKKYNDTYR----SSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQE 705
LK ++ D + + LSG EWY QA RA+NQAIGR IRHR DYGA+ L D RF
Sbjct: 658 LKMQFLDEMKGQGGAGGQFLSGQEWYRQQASRAVNQAIGRVIRHRQDYGAVFLCDHRFAF 717
Query: 706 ERNRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
RA + W+R ++ YD+F + + FFR
Sbjct: 718 ADARAQLPSWVRPHVRVYDNFGHVIRDVAQFFR 750
>gi|38707236|gb|AAR27236.1| DEAH helicase isoform 3 [Mus musculus]
Length = 1164
Score = 311 bits (797), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 246/819 (30%), Positives = 372/819 (45%), Gaps = 174/819 (21%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ G+ V+FP+QPY Q +M +V+ L + + +LESPTGTGK+L LLCSTLAWQ
Sbjct: 6 LNGVTVDFPFQPYPCQQEYMTKVLECLQKK-----VNGILESPTGTGKTLCLLCSTLAWQ 60
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVK 139
Q+ L++ ++++ ++ Q T A + +
Sbjct: 61 QH--LRDAVSSLKIAE------------------RVQGELFASRTLSSWGSAAAASGDSI 100
Query: 140 KKMT--PTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE- 196
+ T P I YASRTHSQ++QVI E + TAYR + VL SR+ C + V+ +E+ +
Sbjct: 101 ECYTDIPKIIYASRTHSQLTQVIRELRNTAYRPKVCVLGSREQLCIHPEVKKQESNHMQI 160
Query: 197 --CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARS 254
C+ + R+ C + NV L++ + DIEDLV G + C YY +R+
Sbjct: 161 SLCRKKVASRS--CHFYNNVEA----KFLEQDLATPILDIEDLVKNGSKQKMCPYYLSRN 214
Query: 255 MADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDID-EDVLL 313
M A ++F PY+Y+++ R A +D+KG ++I DEAHN+E I ++ S D+ DV
Sbjct: 215 MKQQADIIFMPYNYLLDAKSRKAHSIDLKGTVVIFDEAHNVEKICEESASFDLTPRDVAS 274
Query: 314 KLQMELEQVCSVNPMIYQPLIEMTQDLV------GW------IERRKATLAKREFQHFFS 361
L++ + QV + Q E+ Q+ + G I + K L + E
Sbjct: 275 GLEI-INQVLEEQARVTQQ-GELQQEFIVDTSSSGLNMELEDIAKLKMILLRLEEAIDAV 332
Query: 362 CWTGDK---------ALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVI 412
GD EA I+ Q +LE + I+ HL+G + +
Sbjct: 333 QLPGDDRGVTKPGSYIFELFAEAQITFQTKGCILESLDQIIQ----------HLAGRTRV 382
Query: 413 -----TLEGLFSSLTYFFSRN---GSHVSDYQLALQKYIK---------RDSKNPGGNWT 455
L+ L + FS + GS S L++ K R + W+
Sbjct: 383 FTNTAGLQKLMDIIQIVFSVDPPEGSPGSLVGLSISHSYKVHIHPETSHRRAAKRSDAWS 442
Query: 456 HT--------LSLWCLNPAVVFKD-VAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEA 506
T LS WC +P+ ++ V + ++ILTSGTL+P++SF+ E+ + F CLE
Sbjct: 443 TTASRKQGKVLSYWCFSPSQSMRELVCQGVRTLILTSGTLAPLSSFALEMQIPFPVCLEN 502
Query: 507 PHVIDVDLQVLTSVISTGPDNYPLNASYKTA----------------------------D 538
PH+ID + Q+ ++ GPD L+++Y
Sbjct: 503 PHIIDKN-QLWVGIVPRGPDGVQLSSAYDKRFSEECLSSLGKALSNIARVVPHGLLVFFP 561
Query: 539 GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVR 598
Y +MEK W+ G ++ A KPLFVEP+ ++ F V+ YY ++
Sbjct: 562 SYPVMEKSLEFWQVQGLARKVEALKPLFVEPR--NKGSFSEVIDAYYQQVA--------- 610
Query: 599 KKRVKREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNI 643
+ GA+FLAVCRGK IV G+P+P
Sbjct: 611 -------------------SPASNGATFLAVCRGKASEGLDFSDMNGRGVIVTGLPYPPR 651
Query: 644 NDIQVSLKKKYNDTYRSSKNL----LSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILL 699
D +V LK ++ D R + LSG EWY QA RA+NQAIGR IRHR DYGAI L
Sbjct: 652 MDPRVVLKMQFLDEMRGRSGVGGQCLSGQEWYQQQASRAVNQAIGRVIRHRHDYGAIFLC 711
Query: 700 DERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
D RF RA + W+R +K YD+F + + FFR
Sbjct: 712 DHRFAYADARAQLPSWVRPYLKVYDNFGHVIRDVAQFFR 750
>gi|38707238|gb|AAR27237.1| DEAH helicase isoform 5 [Mus musculus]
Length = 1170
Score = 311 bits (797), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 245/817 (29%), Positives = 372/817 (45%), Gaps = 170/817 (20%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ G+ V+FP+QPY Q +M +V+ L + + +LESPTGTGK+L LLCSTLAWQ
Sbjct: 6 LNGVTVDFPFQPYPCQQEYMTKVLECLQKK-----VNGILESPTGTGKTLCLLCSTLAWQ 60
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVK 139
Q+ L++ ++++ ++ G F + S + + +
Sbjct: 61 QH--LRDAVSSLKIAE---------RVQGELFASRTLSSWGSAAAASGDSIECYTD---- 105
Query: 140 KKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE--- 196
P I YASRTHSQ++QVI E + TAYR + VL SR+ C + V+ +E+ +
Sbjct: 106 ---IPKIIYASRTHSQLTQVIRELRNTAYRPKVCVLGSREQLCIHPEVKKQESNHMQISL 162
Query: 197 CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMA 256
C+ + R+ C + NV L++ + DIEDLV G + C YY +R+M
Sbjct: 163 CRKKVASRS--CHFYNNVEA----KFLEQDLATPILDIEDLVKNGSKQKMCPYYLSRNMK 216
Query: 257 DDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDID-EDVLLKL 315
A ++F PY+Y+++ R A +D+KG ++I DEAHN+E I ++ S D+ DV L
Sbjct: 217 QQADIIFMPYNYLLDAKSRKAHSIDLKGTVVIFDEAHNVEKICEESASFDLTPRDVASGL 276
Query: 316 QMELEQVCSVNPMIYQPLIEMTQDLV------GW------IERRKATLAKREFQHFFSCW 363
++ + QV + Q E+ Q+ + G I + K L + E
Sbjct: 277 EI-INQVLEEQARVTQQ-GELQQEFIVDTSSSGLNMELEDIAKLKMILLRLEEAIDAVQL 334
Query: 364 TGDK---------ALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVI-- 412
GD EA I+ Q +LE + I+ HL+G + +
Sbjct: 335 PGDDRGVTKPGSYIFELFAEAQITFQTKGCILESLDQIIQ----------HLAGRTRVFT 384
Query: 413 ---TLEGLFSSLTYFFSRN---GSHVSDYQLALQKYIK---------RDSKNPGGNWTHT 457
L+ L + FS + GS S L++ K R + W+ T
Sbjct: 385 NTAGLQKLMDIIQIVFSVDPPEGSPGSLVGLSISHSYKVHIHPETSHRRAAKRSDAWSTT 444
Query: 458 --------LSLWCLNPAVVFKD-VAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPH 508
LS WC +P+ ++ V + ++ILTSGTL+P++SF+ E+ + F CLE PH
Sbjct: 445 ASRKQGKVLSYWCFSPSQSMRELVCQGVRTLILTSGTLAPLSSFALEMQIPFPVCLENPH 504
Query: 509 VIDVDLQVLTSVISTGPDNYPLNASYKTA----------------------------DGY 540
+ID + Q+ ++ GPD L+++Y Y
Sbjct: 505 IIDKN-QLWVGIVPRGPDGVQLSSAYDKRFSEECLSSLGKALSNIARVVPHGLLVFFPSY 563
Query: 541 KLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKK 600
+MEK W+ G ++ A KPLFVEP+ ++ F V+ YY ++
Sbjct: 564 PVMEKSLEFWQVQGLARKVEALKPLFVEPR--NKGSFSEVIDAYYQQVA----------- 610
Query: 601 RVKREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNIND 645
+ GA+FLAVCRGK IV G+P+P D
Sbjct: 611 -----------------SPASNGATFLAVCRGKASEGLDFSDMNGRGVIVTGLPYPPRMD 653
Query: 646 IQVSLKKKYNDTYRSSKNL----LSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDE 701
+V LK ++ D R + LSG EWY QA RA+NQAIGR IRHR DYGAI L D
Sbjct: 654 PRVVLKMQFLDEMRGRSGVGGQCLSGQEWYQQQASRAVNQAIGRVIRHRHDYGAIFLCDH 713
Query: 702 RFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
RF RA + W+R +K YD+F + + FFR
Sbjct: 714 RFAYADARAQLPSWVRPYLKVYDNFGHVIRDVAQFFR 750
>gi|38707240|gb|AAR27238.1| DEAH helicase isoform 6 [Mus musculus]
Length = 1128
Score = 311 bits (796), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 245/817 (29%), Positives = 372/817 (45%), Gaps = 170/817 (20%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ G+ V+FP+QPY Q +M +V+ L + + +LESPTGTGK+L LLCSTLAWQ
Sbjct: 6 LNGVTVDFPFQPYPCQQEYMTKVLECLQKK-----VNGILESPTGTGKTLCLLCSTLAWQ 60
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVK 139
Q+ L++ ++++ ++ G F + S + + +
Sbjct: 61 QH--LRDAVSSLKIAE---------RVQGELFASRTLSSWGSAAAASGDSIECYTD---- 105
Query: 140 KKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE--- 196
P I YASRTHSQ++QVI E + TAYR + VL SR+ C + V+ +E+ +
Sbjct: 106 ---IPKIIYASRTHSQLTQVIRELRNTAYRPKVCVLGSREQLCIHPEVKKQESNHMQISL 162
Query: 197 CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMA 256
C+ + R+ C + NV L++ + DIEDLV G + C YY +R+M
Sbjct: 163 CRKKVASRS--CHFYNNVEA----KFLEQDLATPILDIEDLVKNGSKQKMCPYYLSRNMK 216
Query: 257 DDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDID-EDVLLKL 315
A ++F PY+Y+++ R A +D+KG ++I DEAHN+E I ++ S D+ DV L
Sbjct: 217 QQADIIFMPYNYLLDAKSRKAHSIDLKGTVVIFDEAHNVEKICEESASFDLTPRDVASGL 276
Query: 316 QMELEQVCSVNPMIYQPLIEMTQDLV------GW------IERRKATLAKREFQHFFSCW 363
++ + QV + Q E+ Q+ + G I + K L + E
Sbjct: 277 EI-INQVLEEQARVTQQ-GELQQEFIVDTSSSGLNMELEDIAKLKMILLRLEEAIDAVQL 334
Query: 364 TGDK---------ALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVI-- 412
GD EA I+ Q +LE + I+ HL+G + +
Sbjct: 335 PGDDRGVTKPGSYIFELFAEAQITFQTKGCILESLDQIIQ----------HLAGRTRVFT 384
Query: 413 ---TLEGLFSSLTYFFSRN---GSHVSDYQLALQKYIK---------RDSKNPGGNWTHT 457
L+ L + FS + GS S L++ K R + W+ T
Sbjct: 385 NTAGLQKLMDIIQIVFSVDPPEGSPGSLVGLSISHSYKVHIHPETSHRRAAKRSDAWSTT 444
Query: 458 --------LSLWCLNPAVVFKD-VAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPH 508
LS WC +P+ ++ V + ++ILTSGTL+P++SF+ E+ + F CLE PH
Sbjct: 445 ASRKQGKVLSYWCFSPSQSMRELVCQGVRTLILTSGTLAPLSSFALEMQIPFPVCLENPH 504
Query: 509 VIDVDLQVLTSVISTGPDNYPLNASYKTA----------------------------DGY 540
+ID + Q+ ++ GPD L+++Y Y
Sbjct: 505 IIDKN-QLWVGIVPRGPDGVQLSSAYDKRFSEECLSSLGKALSNIARVVPHGLLVFFPSY 563
Query: 541 KLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKK 600
+MEK W+ G ++ A KPLFVEP+ ++ F V+ YY ++
Sbjct: 564 PVMEKSLEFWQVQGLARKVEALKPLFVEPR--NKGSFSEVIDAYYQQVA----------- 610
Query: 601 RVKREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNIND 645
+ GA+FLAVCRGK IV G+P+P D
Sbjct: 611 -----------------SPASNGATFLAVCRGKASEGLDFSDMNGRGVIVTGLPYPPRMD 653
Query: 646 IQVSLKKKYNDTYRSSKNL----LSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDE 701
+V LK ++ D R + LSG EWY QA RA+NQAIGR IRHR DYGAI L D
Sbjct: 654 PRVVLKMQFLDEMRGRSGVGGQCLSGQEWYQQQASRAVNQAIGRVIRHRHDYGAIFLCDH 713
Query: 702 RFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
RF RA + W+R +K YD+F + + FFR
Sbjct: 714 RFAYADARAQLPSWVRPYLKVYDNFGHVIRDVAQFFR 750
>gi|111493941|gb|AAI05579.1| Rtel1 protein [Mus musculus]
Length = 1203
Score = 310 bits (795), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 244/817 (29%), Positives = 371/817 (45%), Gaps = 170/817 (20%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ G+ V+FP+QPY Q +M +V+ L + + +LESPTGTGK+L LLCSTLAWQ
Sbjct: 6 LNGVTVDFPFQPYPCQQEYMTKVLECLQKK-----VNGILESPTGTGKTLCLLCSTLAWQ 60
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVK 139
Q+ L++ ++++ ++ G F + S + + +
Sbjct: 61 QH--LRDAVSSLKIAE---------RVQGELFASRTLSSWGSAAAASGDSIECYTD---- 105
Query: 140 KKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE--- 196
P I YASRTHSQ++QVI E + TAYR + VL SR+ C + V+ +E+ +
Sbjct: 106 ---IPKIIYASRTHSQLTQVIRELRNTAYRPKVCVLGSREQLCIHPEVKKQESNHMQISL 162
Query: 197 CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMA 256
C+ + R+ C + NV L++ + DIEDLV G + C YY +R+M
Sbjct: 163 CRKKVASRS--CHFYNNVET----KFLEQDLATPILDIEDLVKNGSKQKMCPYYLSRNMK 216
Query: 257 DDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDID-EDVLLKL 315
A ++F PY+Y+++ R A +D+KG ++I DEAHN+E I ++ S D+ DV L
Sbjct: 217 QQADIIFMPYNYLLDAKSRKAHSIDLKGTVVIFDEAHNVEKICEESASFDLTPRDVASGL 276
Query: 316 QMELEQVCSVNPMIYQPLIEMTQDLV------GW------IERRKATLAKREFQHFFSCW 363
++ + QV + Q E+ Q+ + G I + K L + E
Sbjct: 277 EI-INQVLEEQARVTQQ-GELQQEFIVDTSSSGLNMELEDIAKLKMILLRLEEAIDAVQL 334
Query: 364 TGDK---------ALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVIT- 413
GD EA I+ Q +LE + I+ HL+G + ++
Sbjct: 335 PGDDRGVTKPGSYIFELFAEAQITFQTKGCILESLDQIIQ----------HLAGRTGVST 384
Query: 414 ----LEGLFSSLTYFFSRN---GSHVSDYQLALQKYIK---------RDSKNPGGNWTHT 457
L+ L + FS + GS S L + K R + W+ T
Sbjct: 385 NTAGLQKLMDIIQIVFSADPPEGSPGSLVGLGISHSYKVHIHPETSHRRAAKRSDAWSTT 444
Query: 458 --------LSLWCLNPAVVFKD-VAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPH 508
LS WC +P+ ++ V + ++ILTSGTL+P++SF+ E+ + F CLE PH
Sbjct: 445 ASRKQGKVLSYWCFSPSQSMRELVCQGVRTLILTSGTLAPLSSFALEMQIPFPVCLENPH 504
Query: 509 VIDVDLQVLTSVISTGPDNYPLNASYKTA----------------------------DGY 540
+ID + Q+ ++ GPD L+++Y Y
Sbjct: 505 IIDKN-QLWVGIVPRGPDGVQLSSAYDKRFSEECLSSLGKALSNIARVVPHGLLVFFPSY 563
Query: 541 KLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKK 600
+MEK W+ G ++ A KPLFVEP+ ++ F V+ YY ++
Sbjct: 564 PVMEKSLEFWQVQGLARKVEALKPLFVEPR--NKGSFSEVIDAYYQQVA----------- 610
Query: 601 RVKREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNIND 645
+ GA+ LAVCRGK IV G+P+P D
Sbjct: 611 -----------------SPASNGATLLAVCRGKASEGLDSSDMNGRGVIVTGLPYPPRMD 653
Query: 646 IQVSLKKKYNDTYRSSKNL----LSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDE 701
+V LK ++ D R + LSG EWY QA RA+NQAIGR IRHR DYGAI L D
Sbjct: 654 PRVVLKMQFLDEMRGRSGVGGQCLSGQEWYQQQASRAVNQAIGRVIRHRHDYGAIFLCDH 713
Query: 702 RFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
RF RA + W+R +K YD+F + + FFR
Sbjct: 714 RFAYADARAQLPSWVRPYLKVYDNFGHVIRDVAQFFR 750
>gi|332030654|gb|EGI70342.1| Regulator of telomere elongation helicase 1-like protein
[Acromyrmex echinatior]
Length = 976
Score = 310 bits (795), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 249/826 (30%), Positives = 383/826 (46%), Gaps = 187/826 (22%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ I V FP++PY Q +M +VI L Q H +LESPTGTGK+L+LLCS+L+W
Sbjct: 6 INDIIVTFPFKPYPVQEEYMKKVIECLQNGQ-----HGVLESPTGTGKTLNLLCSSLSWL 60
Query: 80 --QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKN 137
+ +L+ Q+ + K D GG F ++ + A +N
Sbjct: 61 LTKKAQLQAQVIAGAIEKKDF---------GGNFFKYL-------TSGLEKAAGVPDNVQ 104
Query: 138 VKKKMTPTIFYASRTHSQISQVISEYKKTAYR-VPMAVLASRKHYCTNKYVRDKE---NI 193
P I YASRTHSQ+SQ + E KKT+Y+ V AVL SR C + V + N
Sbjct: 105 SFGWAIPKIIYASRTHSQLSQAMYELKKTSYKHVATAVLGSRDQLCIHPEVSKETSSFNK 164
Query: 194 DEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAAR 253
C + R C F NV + P ++ EV DIEDLV VGQ + C Y+ A+
Sbjct: 165 IHMCHAKVKSRT--CFYFNNVEARKDDPVFKQ----EVLDIEDLVKVGQKHKCCPYFLAK 218
Query: 254 SMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLL 313
+ +A +VF PY+Y+++P R + +D++ +++LDEAHN+E + +A S+ I
Sbjct: 219 ELKQNADIVFMPYNYLLDPKTRRSQGIDLQNTVVLLDEAHNVEKVCEEAASLQISST--- 275
Query: 314 KLQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSC----------W 363
+ M +++V +V QD+ E++ L++ Q F+
Sbjct: 276 DIAMCIDEVTAV-----------MQDMAKDSEQQNDFLSENNVQKDFTAEDLCILKAMFL 324
Query: 364 TGDKALRELQEANISR-QCFP--ILLECATKAIKEATDTESELPHLSGMSVITLEGLFSS 420
+KA+ ++ N S FP + E K EL H G I ++ L
Sbjct: 325 ELEKAIDSIELKNRSDGDTFPGGYIFELLEKI---------ELTH--GKEQIVVDKLDKL 373
Query: 421 LTYFFSRNGSHVSDYQLALQKY--IKRDSKNPGGNWTH---------------------- 456
+ Y + + S + ALQK+ + + + N G + T
Sbjct: 374 ILYLTTTSTSPFARKGNALQKFSDLLKTAFNSGASITRHKEKVKRCYKVHIQMEEQKKNY 433
Query: 457 ----------------TLSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQ 499
+S WC +P + + E + S++LTSGTLSP+ F SELG+
Sbjct: 434 RNDVWESKKTTKTDGKLISYWCFSPGFGMEQMVEQGIRSVVLTSGTLSPLKPFISELGIP 493
Query: 500 FGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTAD--------------------- 538
LE PH++ + QV V+S GPDN+PLN+SY T +
Sbjct: 494 IAVQLENPHIVTKE-QVCVGVLSQGPDNHPLNSSYNTRNDPKYIASLGRTVYNFSCIVPH 552
Query: 539 -------GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQG 591
Y +M+K + W+ G W+++ +KP++VEP S++ F V+ YY I
Sbjct: 553 GLLIFFPSYPIMKKCRDEWQNMGLWTQIAERKPIYVEP--NSKDGFVNVMNEYYQKIKDP 610
Query: 592 SKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKI---------------VV 636
S C KGA F+AVCRGK+ ++
Sbjct: 611 S-C---------------------------KGAVFMAVCRGKVSEGLDFANANGRAVLII 642
Query: 637 GIPFPNINDIQVSLKKKYNDTYRSSKNL-LSGNEWYCNQAFRALNQAIGRCIRHRFDYGA 695
G+PFP + D ++ LK++Y + R++K L+G EWY +A RA+NQAIGR IRH+ DYGA
Sbjct: 643 GLPFPPLKDPRIMLKQRYLEEIRTTKKEGLTGQEWYQLEASRAVNQAIGRIIRHKSDYGA 702
Query: 696 IILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFRDVK 741
+IL D RF+ + +S WLR IK++ +F + L+ FFR+ +
Sbjct: 703 VILCDCRFENPNFKKQLSAWLRPYIKKFTNFGMITKELREFFRNAE 748
>gi|262263445|ref|NP_001160138.1| regulator of telomere elongation helicase 1 isoform 3 [Mus
musculus]
Length = 1170
Score = 310 bits (795), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 246/819 (30%), Positives = 371/819 (45%), Gaps = 174/819 (21%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ G+ V+FP+QPY Q +M +V+ L + + +LESPTGTGK+L LLCSTLAWQ
Sbjct: 6 LNGVTVDFPFQPYPCQQEYMTKVLECLQKK-----VNGILESPTGTGKTLCLLCSTLAWQ 60
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVK 139
Q+ L++ ++++ ++ Q T A + +
Sbjct: 61 QH--LRDAVSSLKIAE------------------RVQGELFASRTLSSWGSAAAASGDSI 100
Query: 140 KKMT--PTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE- 196
+ T P I YASRTHSQ++QVI E + TAYR + VL SR+ C + V+ +E+ +
Sbjct: 101 ECYTDIPKIIYASRTHSQLTQVIRELRNTAYRPKVCVLGSREQLCIHPEVKKQESNHMQI 160
Query: 197 --CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARS 254
C+ + R+ C + NV L++ + DIEDLV G + C YY +R+
Sbjct: 161 SLCRKKVASRS--CHFYNNVEA----KFLEQDLATPILDIEDLVKNGSKQKMCPYYLSRN 214
Query: 255 MADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDID-EDVLL 313
M A ++F PY+Y+++ R A +D+KG ++I DEAHN+E I ++ S D+ DV
Sbjct: 215 MKQQADIIFMPYNYLLDAKSRKAHSIDLKGTVVIFDEAHNVEKICEESASFDLTPRDVAS 274
Query: 314 KLQMELEQVCSVNPMIYQPLIEMTQDLV------GW------IERRKATLAKREFQHFFS 361
L++ + QV + Q E+ Q+ + G I + K L + E
Sbjct: 275 GLEI-INQVLEEQARVTQQ-GELQQEFIVDTSSSGLNMELEDIAKLKMILLRLEEAIDAV 332
Query: 362 CWTGDK---------ALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVI 412
GD EA I+ Q +LE + I+ HL+G + +
Sbjct: 333 QLPGDDRGVTKPGSYIFELFAEAQITFQTKGCILESLDQIIQ----------HLAGRTGV 382
Query: 413 -----TLEGLFSSLTYFFSRN---GSHVSDYQLALQKYIK---------RDSKNPGGNWT 455
L+ L + FS + GS S L + K R + W+
Sbjct: 383 FTNTAGLQKLMDIIQIVFSVDPPEGSPGSLVGLGISHSYKVHIHPETSHRRAAKRSDAWS 442
Query: 456 HT--------LSLWCLNPAVVFKD-VAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEA 506
T LS WC +P+ ++ V + ++ILTSGTL+P++SF+ E+ + F CLE
Sbjct: 443 TTASRKQGKVLSYWCFSPSQSMRELVCQGVRTLILTSGTLAPLSSFALEMQIPFPVCLEN 502
Query: 507 PHVIDVDLQVLTSVISTGPDNYPLNASYKTA----------------------------D 538
PH+ID + Q+ ++ GPD L+++Y
Sbjct: 503 PHIIDKN-QLWVGIVPRGPDGVQLSSAYDKRFSEECLSSLGKALSNIARVVPHGLLVFFP 561
Query: 539 GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVR 598
Y +MEK W+ G ++ A KPLFVEP+ ++ F V+ YY ++
Sbjct: 562 SYPVMEKSLEFWQVQGLARKVEALKPLFVEPR--NKGSFSEVIDAYYQQVA--------- 610
Query: 599 KKRVKREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNI 643
+ GA+FLAVCRGK IV G+P+P
Sbjct: 611 -------------------SPASNGATFLAVCRGKASEGLDFSDMNGRGVIVTGLPYPPR 651
Query: 644 NDIQVSLKKKYNDTYRSSKNL----LSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILL 699
D +V LK ++ D R + LSG EWY QA RA+NQAIGR IRHR DYGAI L
Sbjct: 652 MDPRVVLKMQFLDEMRGRSGVGGQCLSGQEWYQQQASRAVNQAIGRVIRHRHDYGAIFLC 711
Query: 700 DERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
D RF RA + W+R +K YD+F + + FFR
Sbjct: 712 DHRFAYADARAQLPSWVRPYLKVYDNFGHVIRDVAQFFR 750
>gi|262263447|ref|NP_001160139.1| regulator of telomere elongation helicase 1 isoform 4 [Mus
musculus]
gi|219521615|gb|AAI44978.1| Rtel1 protein [Mus musculus]
Length = 1164
Score = 310 bits (795), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 246/819 (30%), Positives = 371/819 (45%), Gaps = 174/819 (21%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ G+ V+FP+QPY Q +M +V+ L + + +LESPTGTGK+L LLCSTLAWQ
Sbjct: 6 LNGVTVDFPFQPYPCQQEYMTKVLECLQKK-----VNGILESPTGTGKTLCLLCSTLAWQ 60
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVK 139
Q+ L++ ++++ ++ Q T A + +
Sbjct: 61 QH--LRDAVSSLKIAE------------------RVQGELFASRTLSSWGSAAAASGDSI 100
Query: 140 KKMT--PTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE- 196
+ T P I YASRTHSQ++QVI E + TAYR + VL SR+ C + V+ +E+ +
Sbjct: 101 ECYTDIPKIIYASRTHSQLTQVIRELRNTAYRPKVCVLGSREQLCIHPEVKKQESNHMQI 160
Query: 197 --CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARS 254
C+ + R+ C + NV L++ + DIEDLV G + C YY +R+
Sbjct: 161 SLCRKKVASRS--CHFYNNVEA----KFLEQDLATPILDIEDLVKNGSKQKMCPYYLSRN 214
Query: 255 MADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDID-EDVLL 313
M A ++F PY+Y+++ R A +D+KG ++I DEAHN+E I ++ S D+ DV
Sbjct: 215 MKQQADIIFMPYNYLLDAKSRKAHSIDLKGTVVIFDEAHNVEKICEESASFDLTPRDVAS 274
Query: 314 KLQMELEQVCSVNPMIYQPLIEMTQDLV------GW------IERRKATLAKREFQHFFS 361
L++ + QV + Q E+ Q+ + G I + K L + E
Sbjct: 275 GLEI-INQVLEEQARVTQQ-GELQQEFIVDTSSSGLNMELEDIAKLKMILLRLEEAIDAV 332
Query: 362 CWTGDK---------ALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVI 412
GD EA I+ Q +LE + I+ HL+G + +
Sbjct: 333 QLPGDDRGVTKPGSYIFELFAEAQITFQTKGCILESLDQIIQ----------HLAGRTGV 382
Query: 413 -----TLEGLFSSLTYFFSRN---GSHVSDYQLALQKYIK---------RDSKNPGGNWT 455
L+ L + FS + GS S L + K R + W+
Sbjct: 383 FTNTAGLQKLMDIIQIVFSVDPPEGSPGSLVGLGISHSYKVHIHPETSHRRAAKRSDAWS 442
Query: 456 HT--------LSLWCLNPAVVFKD-VAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEA 506
T LS WC +P+ ++ V + ++ILTSGTL+P++SF+ E+ + F CLE
Sbjct: 443 TTASRKQGKVLSYWCFSPSQSMRELVCQGVRTLILTSGTLAPLSSFALEMQIPFPVCLEN 502
Query: 507 PHVIDVDLQVLTSVISTGPDNYPLNASYKTA----------------------------D 538
PH+ID + Q+ ++ GPD L+++Y
Sbjct: 503 PHIIDKN-QLWVGIVPRGPDGVQLSSAYDKRFSEECLSSLGKALSNIARVVPHGLLVFFP 561
Query: 539 GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVR 598
Y +MEK W+ G ++ A KPLFVEP+ ++ F V+ YY ++
Sbjct: 562 SYPVMEKSLEFWQVQGLARKVEALKPLFVEPR--NKGSFSEVIDAYYQQVA--------- 610
Query: 599 KKRVKREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNI 643
+ GA+FLAVCRGK IV G+P+P
Sbjct: 611 -------------------SPASNGATFLAVCRGKASEGLDFSDMNGRGVIVTGLPYPPR 651
Query: 644 NDIQVSLKKKYNDTYRSSKNL----LSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILL 699
D +V LK ++ D R + LSG EWY QA RA+NQAIGR IRHR DYGAI L
Sbjct: 652 MDPRVVLKMQFLDEMRGRSGVGGQCLSGQEWYQQQASRAVNQAIGRVIRHRHDYGAIFLC 711
Query: 700 DERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
D RF RA + W+R +K YD+F + + FFR
Sbjct: 712 DHRFAYADARAQLPSWVRPYLKVYDNFGHVIRDVAQFFR 750
>gi|262263449|ref|NP_001160140.1| regulator of telomere elongation helicase 1 isoform 5 [Mus
musculus]
Length = 1128
Score = 310 bits (795), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 246/819 (30%), Positives = 371/819 (45%), Gaps = 174/819 (21%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ G+ V+FP+QPY Q +M +V+ L + + +LESPTGTGK+L LLCSTLAWQ
Sbjct: 6 LNGVTVDFPFQPYPCQQEYMTKVLECLQKK-----VNGILESPTGTGKTLCLLCSTLAWQ 60
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVK 139
Q+ L++ ++++ ++ Q T A + +
Sbjct: 61 QH--LRDAVSSLKIAE------------------RVQGELFASRTLSSWGSAAAASGDSI 100
Query: 140 KKMT--PTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE- 196
+ T P I YASRTHSQ++QVI E + TAYR + VL SR+ C + V+ +E+ +
Sbjct: 101 ECYTDIPKIIYASRTHSQLTQVIRELRNTAYRPKVCVLGSREQLCIHPEVKKQESNHMQI 160
Query: 197 --CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARS 254
C+ + R+ C + NV L++ + DIEDLV G + C YY +R+
Sbjct: 161 SLCRKKVASRS--CHFYNNVEA----KFLEQDLATPILDIEDLVKNGSKQKMCPYYLSRN 214
Query: 255 MADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDID-EDVLL 313
M A ++F PY+Y+++ R A +D+KG ++I DEAHN+E I ++ S D+ DV
Sbjct: 215 MKQQADIIFMPYNYLLDAKSRKAHSIDLKGTVVIFDEAHNVEKICEESASFDLTPRDVAS 274
Query: 314 KLQMELEQVCSVNPMIYQPLIEMTQDLV------GW------IERRKATLAKREFQHFFS 361
L++ + QV + Q E+ Q+ + G I + K L + E
Sbjct: 275 GLEI-INQVLEEQARVTQQ-GELQQEFIVDTSSSGLNMELEDIAKLKMILLRLEEAIDAV 332
Query: 362 CWTGDK---------ALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVI 412
GD EA I+ Q +LE + I+ HL+G + +
Sbjct: 333 QLPGDDRGVTKPGSYIFELFAEAQITFQTKGCILESLDQIIQ----------HLAGRTGV 382
Query: 413 -----TLEGLFSSLTYFFSRN---GSHVSDYQLALQKYIK---------RDSKNPGGNWT 455
L+ L + FS + GS S L + K R + W+
Sbjct: 383 FTNTAGLQKLMDIIQIVFSVDPPEGSPGSLVGLGISHSYKVHIHPETSHRRAAKRSDAWS 442
Query: 456 HT--------LSLWCLNPAVVFKD-VAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEA 506
T LS WC +P+ ++ V + ++ILTSGTL+P++SF+ E+ + F CLE
Sbjct: 443 TTASRKQGKVLSYWCFSPSQSMRELVCQGVRTLILTSGTLAPLSSFALEMQIPFPVCLEN 502
Query: 507 PHVIDVDLQVLTSVISTGPDNYPLNASYKTA----------------------------D 538
PH+ID + Q+ ++ GPD L+++Y
Sbjct: 503 PHIIDKN-QLWVGIVPRGPDGVQLSSAYDKRFSEECLSSLGKALSNIARVVPHGLLVFFP 561
Query: 539 GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVR 598
Y +MEK W+ G ++ A KPLFVEP+ ++ F V+ YY ++
Sbjct: 562 SYPVMEKSLEFWQVQGLARKVEALKPLFVEPR--NKGSFSEVIDAYYQQVA--------- 610
Query: 599 KKRVKREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNI 643
+ GA+FLAVCRGK IV G+P+P
Sbjct: 611 -------------------SPASNGATFLAVCRGKASEGLDFSDMNGRGVIVTGLPYPPR 651
Query: 644 NDIQVSLKKKYNDTYRSSKNL----LSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILL 699
D +V LK ++ D R + LSG EWY QA RA+NQAIGR IRHR DYGAI L
Sbjct: 652 MDPRVVLKMQFLDEMRGRSGVGGQCLSGQEWYQQQASRAVNQAIGRVIRHRHDYGAIFLC 711
Query: 700 DERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
D RF RA + W+R +K YD+F + + FFR
Sbjct: 712 DHRFAYADARAQLPSWVRPYLKVYDNFGHVIRDVAQFFR 750
>gi|74146859|dbj|BAE41393.1| unnamed protein product [Mus musculus]
Length = 824
Score = 310 bits (794), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 184/536 (34%), Positives = 277/536 (51%), Gaps = 105/536 (19%)
Query: 278 MEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQVCS--VNPMIYQPLIE 335
M++ +KG ++ILDEAHNIED AR++ S + E L + EL+ + + + ++PL +
Sbjct: 310 MDIKLKGQVVILDEAHNIEDCARESASYSVTEVQLRFARDELDSLINGNIRKKSHEPLRD 369
Query: 336 MTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKE 395
+ +L+ W+E L +R ++ W+G++ L L I+ FP+L + +++
Sbjct: 370 VCYNLINWLETNSKHLVERGYESSCKIWSGNEMLLNLYRMGITTATFPVLQRHLSAVLQK 429
Query: 396 --------ATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYI---- 443
+ ++P +S + + L+GLF L Y F N DY++A+Q+
Sbjct: 430 EEKVTPIHGKEEAIQIPIISASTQVVLKGLFMVLDYLFRENSRFADDYKVAIQQTYSWAN 489
Query: 444 ----------------KRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLS 487
K+ S+ G + L+ WCLNPAV F D+ + +I+LTSGTLS
Sbjct: 490 QIAIFDKTGVLAVPKNKKHSRQKIG--VNALNFWCLNPAVAFSDINDKVRTIVLTSGTLS 547
Query: 488 PMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTAD--------- 538
P+ SFSSELGV F LEA HVI + QV + +GP L A+++ +
Sbjct: 548 PLKSFSSELGVTFSIQLEANHVIS-NSQVWVGTVGSGPKGRNLCATFQHTETFEFQDEVG 606
Query: 539 -------------------GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEI 579
YKL+EKL RW TG W L + K + EP+GG + DF+
Sbjct: 607 MLLLSVCQTVSQGILCFLPSYKLLEKLRERWIFTGLWHSLESVKTVIAEPQGGEKTDFDE 666
Query: 580 VLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGK------ 633
+L+ YY++I K +G D GA +AVCRGK
Sbjct: 667 LLQVYYDAI--------------KFKGEKD-------------GALLIAVCRGKVSEGLD 699
Query: 634 ---------IVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIG 684
I VGIPFPN+ D+QV LK++YND + S+ LL G +WY QA+RALNQA+G
Sbjct: 700 FSDDNARAVITVGIPFPNVKDLQVELKRQYNDHHSKSRGLLPGRQWYEIQAYRALNQALG 759
Query: 685 RCIRHRFDYGAIILLDERFQEERNR--AHISKWLRKSIKQYDSFDASLEGLKSFFR 738
RCIRH+ D+GA+IL+D+RF NR + +SKW+R+ I+ + SF ++LE L F R
Sbjct: 760 RCIRHKNDWGALILVDDRFNNNPNRYISGLSKWVRQQIQHHSSFASALESLTEFSR 815
Score = 72.8 bits (177), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 47/67 (70%), Gaps = 5/67 (7%)
Query: 15 LNAYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCS 74
L+ Y +GG+++ FP + Y +QL M ++ L+ +Q H LLESPTG+GKSL+LLCS
Sbjct: 5 LSDYTIGGVKIHFPCRAYPAQLAMMNSIVRGLNSSQ-----HCLLESPTGSGKSLALLCS 59
Query: 75 TLAWQQN 81
LAWQQ+
Sbjct: 60 ALAWQQS 66
>gi|301111400|ref|XP_002904779.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262095109|gb|EEY53161.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 1058
Score = 310 bits (794), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 245/797 (30%), Positives = 370/797 (46%), Gaps = 167/797 (20%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ GI VEFP+ PY SQL++M +V+ L Q +A+LESPTGTGK+L LLC+TLAW+
Sbjct: 6 ICGIPVEFPFPPYDSQLIYMEKVLLALTSKQ-----NAILESPTGTGKTLCLLCATLAWR 60
Query: 80 QNCKLK---NQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNK 136
+ + K N LA P LA G ++G++ +
Sbjct: 61 RELQKKLGTNTLAPAKRPGPS-------LAYEGY------------GSDGESDAPQL--- 98
Query: 137 NVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDE- 195
P I Y+SRTHSQ+ QV+ E K T+YR +AVL SR+H C N+ V +
Sbjct: 99 -------PRIIYSSRTHSQLKQVVQELKNTSYRPNVAVLGSREHLCVNEKVSKLRGTRQN 151
Query: 196 -ECKLLLGDR----NLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYY 250
C+ DR LG + K + P + DIE+LV + C ++
Sbjct: 152 LACRSTCKDRRCMHKLGFDSYAKRSKKQAQP---------IMDIEELVTTMKEKIICPFF 202
Query: 251 AARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDED 310
R+M +A++VF PY+Y+I+P+ R ++ + I+ +ILI DEAHN+E IA +A S + +
Sbjct: 203 LTRNMLPEAEIVFVPYNYLIDPMARRSIGISIENSILIFDEAHNVESIASEAASYALSSN 262
Query: 311 VLLKLQMELEQVC---SVNPMIYQPLIEMT-QDLVGWIERRKATLAKREFQHFFSCWTGD 366
+ E++ S N + +T +D R L + Q+ F +
Sbjct: 263 DISGCISEVDTFIRGLSTNSIQLNAGSNLTLEDSAVSRCLRMEVLPRYPGQYIFEFF--- 319
Query: 367 KALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVITLEGLFSSLTYFFS 426
++ N++ + P++L + I+ A + S + L+ + S L F
Sbjct: 320 ------EQFNVNFETCPLVLSMIEEIIEVAHGGDD-----SQRAASKLDTMLSFLGTIFR 368
Query: 427 RNGSHV---SDYQLALQKYIKRDSK-----NPG----GNWTHTLSLWCLNPAVVFKDVAE 474
H+ +Y++ +Q+ +R S N G T + WC +P V F+++
Sbjct: 369 SKEQHLQAAKNYRVHIQEIRERPSNSGRLFNSGRKNKTTTTRVFNYWCFHPGVAFREICT 428
Query: 475 LSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNAS 533
++ ++ILTSGTLSP+++ ELG+ F LE HV+D D QV V+ TG LN+S
Sbjct: 429 NNVHNVILTSGTLSPLDTTVKELGIDFPVRLENNHVVDAD-QVWVGVVGTGVTGKKLNSS 487
Query: 534 YKTAD----------------------------GYKLMEKLCNRWRE--TGQ-----WSR 558
Y Y ++E+ ++W+ TGQ W R
Sbjct: 488 YNFRSTETYLLELGNTIVNFTRLVPHGLLVFFPSYSILEESIDKWQRPATGQSALSIWDR 547
Query: 559 LNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQEN 618
+ +K FVEP+G + DF+ V+ Y+ +I+
Sbjct: 548 IVQQKQTFVEPRG--RADFKAVVDEYHQAIAD---------------------------- 577
Query: 619 ANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKKYNDTYRSSKN 663
N KGA F AVCRGK I+ G+PFP D ++ LKK D S
Sbjct: 578 -NPKGAVFFAVCRGKVSEGIDFSNDKGRAVIITGLPFPPTKDPKIMLKKSILDEAVVSPG 636
Query: 664 --LLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIK 721
L+GN WY QA RA+NQAIGR IRHR DYGAIILLDERF ++ + +SKWL+
Sbjct: 637 ELKLTGNAWYIQQASRAVNQAIGRVIRHRHDYGAIILLDERFALKQQQECLSKWLQPYCH 696
Query: 722 QYDSFDASLEGLKSFFR 738
+ + GL FF+
Sbjct: 697 TCRGYGEAHIGLTRFFK 713
>gi|302776424|ref|XP_002971377.1| hypothetical protein SELMODRAFT_94786 [Selaginella moellendorffii]
gi|300161359|gb|EFJ27975.1| hypothetical protein SELMODRAFT_94786 [Selaginella moellendorffii]
Length = 792
Score = 310 bits (793), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 243/809 (30%), Positives = 357/809 (44%), Gaps = 174/809 (21%)
Query: 15 LNAYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCS 74
+ +Y + G+ V FPY Y QLV+M VI+ L + Q +ALLESPTGTGK+L LLC+
Sbjct: 2 MPSYKLKGVDVRFPYDAYDCQLVYMESVIAALQKGQ-----NALLESPTGTGKTLCLLCA 56
Query: 75 TLAWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMN 134
TLAW++ S + PD G SQ S + P+++ + ++
Sbjct: 57 TLAWRE-----------SLAPPD---------RGRRMSASSQSSDLDPTSSQEANKL--- 93
Query: 135 NKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENI- 193
PT+ YASRTHSQ+ QVI E K T+YR M L SR+ C K V+
Sbjct: 94 ---------PTVIYASRTHSQLQQVIHELKATSYRPKMVALGSREQLCIEKDVQKLRGRA 144
Query: 194 -DEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGG--CHEVHDIEDLVNVGQVVRGCSYY 250
+ C+ C K H R + L+K +E DIEDLV +G+ C Y+
Sbjct: 145 QNNACRT-------SCKARKCYHHTRVNEYLKKNPELGNEPIDIEDLVRIGRTHGPCPYF 197
Query: 251 AARSMADDAQLVFCPYSYIINPVIRGAME-VDIKGAILILDEAHNIEDIARDAGSVDIDE 309
+R + ++F PY+Y+I+ R ++ + + +++I DEAHN+E + DA S D+
Sbjct: 198 LSRELHGSVDMIFVPYNYLIDKENRKSLTGIRWENSVIIFDEAHNLEGVCADAASFDLPT 257
Query: 310 DVLLKLQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKR------------EFQ 357
L E Q + + Q I D G E A + +
Sbjct: 258 TTLSACISEAGQCVELATL--QRSISNNADKSGDPENFALLKALLLELSKKIDDISFDSE 315
Query: 358 HFFSCWTGDKALRELQEANISRQCFPIL---LECATKAIKEATDTESELPHLSGMSVITL 414
G L E I+ + +L ++ A ++E + S P S + L
Sbjct: 316 ELGFTRPGSYIYDFLSELKITWETSTMLTDTIDSAISLLQEDSSAPSGKPKTSTCKLELL 375
Query: 415 EGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAE 474
F T F ++ SH + Y++++ K + S+ T S WC NP + ++ ++
Sbjct: 376 RDAFR--TIFRGKDSSHATCYRVSVFKVCDKKSR--------TFSWWCFNPGIAMEEFSK 425
Query: 475 LSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNAS 533
L + +I+LTSGTLSP+ SF+ EL + F LE PHVI + Q+ V+S+GP LN+S
Sbjct: 426 LGVRTIVLTSGTLSPLESFAIELKLPFDVRLENPHVIGAN-QIWVGVVSSGPSGRALNSS 484
Query: 534 YKTAD----------------------------GYKLMEKLCNRWRETGQ------WSRL 559
Y+T D Y L+ + W+ Q W R+
Sbjct: 485 YRTRDSPEYKNDLGNTIVNFARIVPDGLLVFFPSYYLLNSCVDSWQTPNQVNGHTLWERI 544
Query: 560 NAKKPLFVEPKGG-----SQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIE 614
K VEPK + EDF +K
Sbjct: 545 CKHKQPVVEPKESALFNQAHEDFLAKVK-------------------------------- 572
Query: 615 SQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKKYND--- 656
++ GA F AVCRGK IV G+PF D +V LK++Y D
Sbjct: 573 ---DSTATGAVFFAVCRGKVSEGLDFADETGRAVIVTGMPFAMKTDPKVRLKRQYLDEEG 629
Query: 657 ----TYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHI 712
T +L+G +WY QA RA+NQA+GR IRH+ DYGAIIL DERF + ++ +
Sbjct: 630 RRTKTITKPFQVLTGEDWYVQQASRAVNQAVGRVIRHKNDYGAIILCDERFAQAGAQSQL 689
Query: 713 SKWLRKSIKQYDSFDASLEGLKSFFRDVK 741
S WLR +K Y F + L FF+D K
Sbjct: 690 SLWLRPHVKLYSKFGDAAFTLTRFFKDKK 718
>gi|347964194|ref|XP_311162.5| AGAP000634-PA [Anopheles gambiae str. PEST]
gi|387912925|sp|Q7QEI1.5|RTEL1_ANOGA RecName: Full=Regulator of telomere elongation helicase 1 homolog
gi|333467418|gb|EAA06834.5| AGAP000634-PA [Anopheles gambiae str. PEST]
Length = 991
Score = 310 bits (793), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 236/815 (28%), Positives = 366/815 (44%), Gaps = 160/815 (19%)
Query: 18 YHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLA 77
Y + GI V FP++PY Q +M +VI L + +LESPTGTGK+LSLLCS++A
Sbjct: 4 YMINGIPVNFPFEPYELQKNYMAKVIECLQ-----NKTNGVLESPTGTGKTLSLLCSSMA 58
Query: 78 WQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKN 137
W + K K H + + +P PE + Q + N
Sbjct: 59 WLLHMKSKQP----KHRMETIDTLPEP--------PELSNAKHAALDPEQALALQQQKAN 106
Query: 138 VKKKMTPTIFYASRTHSQISQVISEYKKTAYR-VPMAVLASRKHYCTNKYVRDKENIDEE 196
K K I YASRTHSQ+SQ + E K T+Y V +L SR C + + +EN +
Sbjct: 107 AKMK----IIYASRTHSQLSQAMQELKNTSYLFVRSIILGSRDQLCIHPDISKQENNAIK 162
Query: 197 ---CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAAR 253
C+ + RN C + V + P + V DIEDLV VG+ ++ C YY ++
Sbjct: 163 TVLCRESVKARN--CSFYNRVETAKDRPDV---ATVPVMDIEDLVTVGRKLKACPYYLSK 217
Query: 254 SMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLL 313
+ + A ++F PY+Y+++P R + + ++ ++ILDEAHN+E + + GS +
Sbjct: 218 ELVEQADVIFMPYNYLLDPKARKSNGLSLQNTVIILDEAHNVEKMCEEVGSALLRSS--- 274
Query: 314 KLQMELEQVCSVNPMIY----------QPLIEMTQDLVGWIERRKATLAKRE------FQ 357
+ + +E SV + + +E+T D + ++ + K F
Sbjct: 275 DIALAIEDTSSVIKSMMDGGGAWTGDGEKQLELTLDDLVLLKEILLGVEKAVDDIPILFS 334
Query: 358 HFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVITLEGL 417
+ G L++ANI ++L+ I T ++ G V GL
Sbjct: 335 QGGTTHPGTYIFDLLEKANIKFGNINVVLQVMNSLITHITTEKT------GGFVRRGAGL 388
Query: 418 FSSLTYFFSRNGSHVSDYQLALQK--YIKRDSKNP-----GG-----NWTHT-------- 457
S + + S +Y+ A++K + + + P GG WT T
Sbjct: 389 QSMVDFLEVVFASSGPEYRQAVEKCFRVHIEPEEPKQLAKGGVKRADGWTATKQPLKAPV 448
Query: 458 ------LSLWCLNPAVVFKDVAEL-SLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVI 510
++ WC NP + + + + SIILTSGTL+P+ F SEL + LE PH+I
Sbjct: 449 KSTSKVINFWCFNPGFGMRQLVDSGTRSIILTSGTLAPLKPFISELSLPVAVSLENPHII 508
Query: 511 DVDLQVLTSVISTGPDNYPLNASYKTAD----------------------------GYKL 542
QV VI+ GPD LN+S+K Y L
Sbjct: 509 -ARSQVYVKVITHGPDRVELNSSFKNRSNPEYIASLGRTALSLCPIIPGGLLIFFPSYPL 567
Query: 543 MEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRV 602
+ K W+ +G W +++ K +FVEP+G Q F + YY +
Sbjct: 568 LNKCSEEWQASGIWGQISRLKQIFVEPRGKDQ--FTTTMAEYYAQV-------------- 611
Query: 603 KREGNNDLNTIESQENANKKGASFLAVCRGKI---------------VVGIPFPNINDIQ 647
+ +GA F+AVCRGK+ + G+PFP + D +
Sbjct: 612 --------------RDPASRGAIFMAVCRGKVSEGLDFADANGRAVMITGLPFPPMMDAR 657
Query: 648 VSLKKKYNDTYRSSKN-LLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEE 706
V LKK+Y DT R+ +N L++GN+WY +A RA+NQAIGR IRH+ DYGAI+L D RFQ
Sbjct: 658 VVLKKQYLDTNRTRENELITGNDWYSLEASRAVNQAIGRVIRHKDDYGAILLCDSRFQNA 717
Query: 707 RNRAHISKWLRKSIKQYDS---FDASLEGLKSFFR 738
R +A +S W+ +++ + F + + FFR
Sbjct: 718 RQQAQLSAWIHSHLRESSAVPNFGTVVGEMSRFFR 752
>gi|301780626|ref|XP_002925736.1| PREDICTED: LOW QUALITY PROTEIN: regulator of telomere elongation
helicase 1-like [Ailuropoda melanoleuca]
Length = 1303
Score = 310 bits (793), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 243/809 (30%), Positives = 370/809 (45%), Gaps = 159/809 (19%)
Query: 22 GIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQN 81
G+ V+FP+QPY Q +M +V+ L + + +LESPTGTGK+L LLC+TLAW+++
Sbjct: 8 GVTVDFPFQPYKCQEEYMSKVLECLQK-----KVNGILESPTGTGKTLCLLCTTLAWREH 62
Query: 82 CKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKK 141
+ I+ A G F+ + S +++G +
Sbjct: 63 LRDAVSARKIAER-----------AQGELFLDRTLSSWGVGTSDGDITGCYAD------- 104
Query: 142 MTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE---CK 198
P I YASRTHSQ++QVISE + T+YR + VL SR+ C + V+ +E+ + C+
Sbjct: 105 -IPKIIYASRTHSQLTQVISELRNTSYRPRVCVLGSREQLCIHPEVKKQESNHMQIHLCR 163
Query: 199 LLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADD 258
+ R+ C + NV + SL++ + DIEDLV G + C YY +R++
Sbjct: 164 KKVASRS--CHFYNNVEEK----SLEQELATPILDIEDLVRSGNKHKLCPYYLSRNLKQQ 217
Query: 259 AQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDE--------- 309
A ++F PY+Y+++ R A +D+KG I+I DEAHN+E + + S D+
Sbjct: 218 ADIIFMPYNYLLDAKSRRAHSIDLKGTIVIFDEAHNVEKMCEETASFDLTPHDLASGLDA 277
Query: 310 -DVLLKLQMELEQ---------VCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHF 359
D +L+ Q + Q S + ++ L E T L + R + + E
Sbjct: 278 IDQVLEEQTKAAQQDELHMGFGAGSADSGLHMGL-EDTAKLKMMLLRLEGAIDAVELPGD 336
Query: 360 FSCWT--GDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVIT--LE 415
S T G EA I+ Q +L+ + I+ + +G+ ++ L+
Sbjct: 337 HSGVTKPGSYIFELFAEAQITFQTKGCILDSLDQIIQHLAGRAGLFTNTAGLQKLSDILQ 396
Query: 416 GLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGN---------WTHT--------L 458
+FS+ S G+ S + ++ K G+ W T L
Sbjct: 397 IVFSA----DSAEGAPGSMVGPGVSQFYKVHIHPDAGHQRKSQRSDAWNSTTARKQGKVL 452
Query: 459 SLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVL 517
S WC +P +++ + +IILTSGTL+P+ SF+ E+ + F CLE PHVID Q+
Sbjct: 453 SYWCFSPGRSMRELVRQGVHTIILTSGTLAPLASFALEMQIPFPVCLENPHVIDRQ-QMW 511
Query: 518 TSVISTGPDNYPLNASY--KTADG--------------------------YKLMEKLCNR 549
++ GPD L++++ + +D Y +MEK
Sbjct: 512 VGIVPKGPDGAQLSSAFDKRFSDACLSSLGKALGNIARVVPHGLLVFFPSYPVMEKSLEF 571
Query: 550 WRETGQWSRLNAKKPLFVEPKGGSQEDF-EIVLKHYYNSISQGSKCAVVRKKRVKREGNN 608
WR +L A KP+FVEP+ S+ F E+V +Y + S GS
Sbjct: 572 WRAHDFARKLEALKPVFVEPR--SKGGFSEVVDAYYTRAASPGS---------------- 613
Query: 609 DLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKK 653
GA FLAVCRGK IV G+P+P D +V LK +
Sbjct: 614 -------------SGAVFLAVCRGKASEGLDFADMNGRGVIVTGLPYPPRMDPRVVLKMQ 660
Query: 654 YNDTYRS----SKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNR 709
+ D + +LSG+EWY QA RA+NQAIGR IRHR DYGAI L D RF R
Sbjct: 661 FLDELKGRGGPGGQVLSGHEWYRQQASRAVNQAIGRVIRHRHDYGAIFLCDHRFAHADAR 720
Query: 710 AHISKWLRKSIKQYDSFDASLEGLKSFFR 738
A + W+R +K YDSF + + FFR
Sbjct: 721 AQLPSWVRPHVKVYDSFGHVIRDVAQFFR 749
>gi|449448190|ref|XP_004141849.1| PREDICTED: regulator of telomere elongation helicase 1-like
[Cucumis sativus]
Length = 1054
Score = 309 bits (791), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 243/798 (30%), Positives = 368/798 (46%), Gaps = 158/798 (19%)
Query: 18 YHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLA 77
Y + GI V+FP+ Y QLV+M +VI +L C+ALLESPTGTGK+L LLC+TLA
Sbjct: 4 YTIRGIDVDFPFDAYDCQLVYMEKVIQSLQEK-----CNALLESPTGTGKTLCLLCATLA 58
Query: 78 WQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKN 137
W+++ G F S ++ S N + +++++
Sbjct: 59 WRKSL--------------------------GEF---SSGRSVSNSQNIEGDPNVLSSQS 89
Query: 138 VKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYV-----RDKEN 192
K PTI Y +RTHSQ+ QVI E KKT+YR M VL SR+ C ++ V R + N
Sbjct: 90 TSPKH-PTIVYTTRTHSQLRQVIQELKKTSYRPKMVVLGSREQLCIHEDVSLLRGRTQNN 148
Query: 193 IDEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAA 252
C+ L R G K+ ++V G+ E DIEDLV +G+ C YY +
Sbjct: 149 ---ACRSLC--RKSGKRHCKHYNRVSGYVKENPHLGDEPIDIEDLVKIGKSFGPCPYYVS 203
Query: 253 RSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVL 312
R + ++F PY+Y+I+ R ++ ++ K ++LI DEAHN+E I DA S D+ +L
Sbjct: 204 RELHKAVDIMFAPYNYLIDRGYRKSLVLEWKNSVLIFDEAHNLESICADAASFDLTSWLL 263
Query: 313 LKLQMELEQVC-------------SVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHF 359
E + S NP + L + L+ +E+ + + +
Sbjct: 264 TACISEAKNCIDLSIKRRDESNDKSGNPDNFAIL----RALLLKLEKGISDIPIHSKELG 319
Query: 360 FSCWTGDKALRELQEANISRQCFPIL---LECATKAIKEATDTESELPHLSGMSVITLEG 416
F+ G L E NI+ + L +E A ++E D + ++ + LE
Sbjct: 320 FTK-PGPYIYELLAELNITHESASKLKGIIEEAAILLEE--DKQQKIQNTG----CRLEN 372
Query: 417 LFSSLTYFF-SRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAEL 475
+ L F ++ +H YQ+ +Q+ G + TLS WC NP + + +
Sbjct: 373 ITDILDIVFREKDNAHAKFYQVHVQENEASAMDGLKGKASRTLSWWCFNPGIALEAFPKK 432
Query: 476 SL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASY 534
+ SIILTSGTLSP++SF+ EL + F LE PHVI + Q+ V+S GP N+SY
Sbjct: 433 EVGSIILTSGTLSPLDSFAQELKLDFPIRLENPHVISSN-QIWAGVVSVGPSGCSFNSSY 491
Query: 535 --KTADGYKL--------------------------MEKLCNRWR------ETGQWSRLN 560
+ ++ YKL +++ + W+ T W R++
Sbjct: 492 WNRESEAYKLDLGNAIVNFARIVPDGLLVFFPSYYFLDQCISCWKNQSLSSSTTIWERIS 551
Query: 561 AKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENAN 620
K +EP+ S F ++ Y + E+ +
Sbjct: 552 KHKKPVIEPRQSSL--FPSSIEDYMFKL----------------------------EDTS 581
Query: 621 KKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKKYND----TYRSS 661
GA F AVCRGK I+ G+PF + ND +V LK+ Y D + R +
Sbjct: 582 SSGAVFFAVCRGKVSEGLDFADHAGRAVIITGMPFASRNDPKVRLKRGYLDHQSQSQRGN 641
Query: 662 KNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIK 721
+++G +WY QA RA+NQA+GR IRHR DYGAII DERF ++ IS W++ IK
Sbjct: 642 CQIMTGEDWYTQQAMRAVNQAVGRVIRHRHDYGAIIFCDERFAHSSRQSQISVWIQPHIK 701
Query: 722 QYDSFDASLEGLKSFFRD 739
Y F + L FFR+
Sbjct: 702 CYSKFGDVVYTLTRFFRN 719
>gi|410953370|ref|XP_003983344.1| PREDICTED: regulator of telomere elongation helicase 1 [Felis
catus]
Length = 1477
Score = 308 bits (790), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 241/808 (29%), Positives = 368/808 (45%), Gaps = 158/808 (19%)
Query: 22 GIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQN 81
G+ V+FP+QPY Q +M +V+ L + + +LESPTGTGK+L LLC+TLAW+++
Sbjct: 8 GVTVDFPFQPYKCQEEYMSKVLECLQK-----KVNGILESPTGTGKTLCLLCTTLAWREH 62
Query: 82 CKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKK 141
+ I+ V L+ G +++G + +
Sbjct: 63 LRDTISARKIAERAQGVLFVDHTLSWGAA------------ASDGDSTACYSD------- 103
Query: 142 MTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE---CK 198
P I YASRTHSQ++QVISE + T+YR + VL SR+ C + V+ +E+ + C+
Sbjct: 104 -VPKIIYASRTHSQLTQVISELRSTSYRPRVCVLGSREQLCIHPEVKKQESNHMQIHLCR 162
Query: 199 LLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADD 258
+ R+ C + NV + SL++ + DIEDLV G + C YY +R++
Sbjct: 163 KKVASRS--CHFYNNVEEK----SLEQELTTSILDIEDLVKSGNKHKLCPYYLSRNLKQQ 216
Query: 259 AQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIE--------------DIARDAGS 304
A ++F PY+Y+++ R A +D+KG ++I DEAHN+E D+A +
Sbjct: 217 ADIIFMPYNYLLDAKSRRAHSIDLKGTVVIFDEAHNVEKMCEESASFDLTPHDVASGLDA 276
Query: 305 VD--IDEDVLLKLQMELEQVCSVNPMIYQPLIEMTQDLVGW---IERRKATLAKREFQHF 359
+D ++E + Q E S + + +E+ +DL + R + + E
Sbjct: 277 IDQVLEEQTKVAQQGEFHLDFSADSVASGLRMEL-EDLAKLKVILLRLEGAIDAVELPGN 335
Query: 360 FSCWT--GDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVIT---- 413
S T G EA I+ Q +L+ + I+ + +G+ ++
Sbjct: 336 QSGVTKPGSYIFELFAEAQITFQTKGCILDSLDQIIQHLAGRTGPFTNTAGLQKLSDIIQ 395
Query: 414 -------LEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHT--------L 458
EG+ SS+ V + A + R S W T L
Sbjct: 396 IVFSADPAEGVSSSVMGPGVSQSYKVHIHPDASHQRTARRSDA----WNATAARKQGKVL 451
Query: 459 SLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVL 517
S WC +P +++ + ++ILTSGTL+P++SF+ EL + F CLE PHVID Q+
Sbjct: 452 SYWCFSPGHSMRELVRQGVRTLILTSGTLAPVSSFALELQIPFPVCLENPHVIDKH-QIW 510
Query: 518 TSVISTGPDNYPLNASY--KTADG--------------------------YKLMEKLCNR 549
++ GPD L++++ + +D Y +MEK
Sbjct: 511 VGIVPKGPDGAQLSSAFDKRFSDACLSSLGKALGNIARVVPHGLLVFFPSYPVMEKSLEF 570
Query: 550 WRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNND 609
WR +L + KPLFVEP+ S+ F V+ YY RV G++
Sbjct: 571 WRARDFARKLESLKPLFVEPR--SKGGFSEVVDAYYT--------------RVASPGSS- 613
Query: 610 LNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKKY 654
GA+FLAVCRGK IV G+P+P D +V LK ++
Sbjct: 614 -------------GATFLAVCRGKASEGLDFADTNGRGVIVTGLPYPPRMDPRVVLKMQF 660
Query: 655 NDTYRS----SKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRA 710
D + LLSG+EWY QA RA+NQAIGR IRHR DYGAI L D RF RA
Sbjct: 661 LDELKGRSGPGGQLLSGHEWYRQQASRAVNQAIGRVIRHRHDYGAIFLCDHRFTHADARA 720
Query: 711 HISKWLRKSIKQYDSFDASLEGLKSFFR 738
+ W+R +K YDSF + + FFR
Sbjct: 721 QLPSWVRPHVKVYDSFGHVIRDVAQFFR 748
>gi|308802574|ref|XP_003078600.1| Helicase of the DEAD superfamily (ISS) [Ostreococcus tauri]
gi|116057053|emb|CAL51480.1| Helicase of the DEAD superfamily (ISS) [Ostreococcus tauri]
Length = 970
Score = 308 bits (788), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 241/784 (30%), Positives = 376/784 (47%), Gaps = 123/784 (15%)
Query: 20 VGGIQVEFP--YQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLA 77
+GG QV+FP P+ +Q++ M +I TL R + HA++ESPTGTGK+L+LLC LA
Sbjct: 104 IGGCQVKFPEGLDPHPAQMMTMSTIIRTLTRKE-----HAMIESPTGTGKTLALLCGALA 158
Query: 78 WQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKN 137
WQ+ K++ + ++ + E A + + P+ P Q + +++
Sbjct: 159 WQEKNKVEMMASGMTTA---VERAKYEKARVEYLMQKCDPTRKKPPVCAQGPGWSADDEY 215
Query: 138 VK----KKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENI 193
K M P IF SRTHSQ+ Q++ E K+T Y +VL+SR+ C +
Sbjct: 216 FKPGSGSSMNPKIFICSRTHSQLGQILGELKRTGYSPRYSVLSSRQRMC------QMQKN 269
Query: 194 DEECKLLLGDR-------NLGCPQF-KNVHKVRGHPSLQKGGCHEVH----DIEDLVNVG 241
D ECK L+G GCP + K+ H VR G ++ D+ED V
Sbjct: 270 DAECKQLIGSDEGKKKTGTTGCPYYNKHTHVVRAMERYPLNGSQGMYPQAWDMEDFERVV 329
Query: 242 QVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARD 301
V GCS++A R M + A +VFCPY+Y+ + IR M ++ +GA +I+DE HNIED+ R+
Sbjct: 330 DEVDGCSFFALRKMYESADVVFCPYNYLFDINIRRKMSIETEGACVIIDEGHNIEDVCRE 389
Query: 302 AGSVDIDEDVLLKLQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFS 361
S + L+ E S N +G + LA +F S
Sbjct: 390 GASAEFS----LQAVGEAMDALSKN--------------LGHVNVETNMLA--DFFRSIS 429
Query: 362 CWTGDKALRELQEANI--SRQCFPILLECATK---AIKEATDTE-------SELPHLSGM 409
+ D E+ I S Q L E ++ A AT +E ++ HL+ +
Sbjct: 430 AFLEDMFRTNRAESTIIQSNQVPSFLQEMLSRFDAAHDMATLSETVNDLMTTKAKHLTPI 489
Query: 410 SV--ITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAV 467
I+L G +S+ S + ++ I DS PG + + C+ P+V
Sbjct: 490 VAPHISLAGDLASIVTMASTQ-PEAYNVIFGMKVDINSDS-CPG------VIIQCMKPSV 541
Query: 468 VFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVI---DVDLQVLTSV---- 520
F VA+ + S+ILTSGTLSPM +F +ELGV+FG +EAPHV+ +V ++V ++
Sbjct: 542 AFNSVAKKARSVILTSGTLSPMTTFEAELGVRFGAKIEAPHVVPNENVYVEVTGALGEIT 601
Query: 521 ------------ISTGPDNYPLNASYKTADG-------YKLMEKLCNRWRETGQWSRLNA 561
+ NY L + G Y L+E++ W +G + +LN
Sbjct: 602 YKATESENAGRRFAQNLGNYLLRYAKIIPGGMLVFFPKYSLIERVVREWHMSGLFGQLND 661
Query: 562 KKPLFVEPKGGSQEDFEIVLKHY-YNSISQGSKCAVVRKKRVKREGNNDLNTIESQENAN 620
K L E +G + F+ L + + GS V + +V EG I+ +++
Sbjct: 662 HKFLCCETRGA--KGFQETLNQFDRGNTRSGSLMLAVYRGKVS-EG------IDFKDDK- 711
Query: 621 KKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYNDTYRSS-KNLLSGNEWYCNQAFRAL 679
R VGIPFP++ D +V KK++ND+ S + +L+G EWY QA+RA
Sbjct: 712 ---------ARAVFCVGIPFPSVFDPRVKAKKEFNDSPTSKQQGMLAGGEWYRAQAYRAY 762
Query: 680 NQAIGRCIRHRFDYGAIILLDERFQEERNRA--HISKWLRKSIKQYDSFDASLEGLKSFF 737
NQA+GRCIRH DY A+ L+D RF+E +ISKW+R + + D + S+ + +FF
Sbjct: 763 NQALGRCIRHPKDYAALFLVDARFREGGAWMLNNISKWIRNNTRASDDVNVSVRQVSAFF 822
Query: 738 RDVK 741
+ ++
Sbjct: 823 KRLR 826
>gi|348685651|gb|EGZ25466.1| hypothetical protein PHYSODRAFT_485995 [Phytophthora sojae]
Length = 1080
Score = 308 bits (788), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 237/811 (29%), Positives = 367/811 (45%), Gaps = 171/811 (21%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ GI VEFP+ PY SQLV+M +V+ L Q +A+LESPTGTGK+L LLC+TLAW+
Sbjct: 6 ICGIPVEFPFPPYDSQLVYMEKVLLALTSKQ-----NAILESPTGTGKTLCLLCATLAWR 60
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVK 139
+ + + ++ S + LA G ++G++ +
Sbjct: 61 RQLQKTLGKSAMATSSAAQQRPGASLAYEGY------------GSDGESDAPQL------ 102
Query: 140 KKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDE--EC 197
P I Y+SRTHSQ+ QV+ E K T+YR +AVL SR+H C N+ V + C
Sbjct: 103 ----PRIIYSSRTHSQLKQVVQELKNTSYRPNVAVLGSREHLCVNEKVSKLRGTRQNLAC 158
Query: 198 KLLLGDR----NLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAAR 253
+ DR LG + K + P + DIE+LV + C ++ R
Sbjct: 159 RSTCKDRRCMYKLGFDAYAKRSKKQAQP---------IMDIEELVTTMKEKTICPFFLTR 209
Query: 254 SMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVL- 312
+M +A+++F PY+Y+I+P+ R ++ + I+ +ILI DEAHN+E IA +A S + + +
Sbjct: 210 NMLPEAEIIFVPYNYLIDPLARRSIGISIENSILIFDEAHNVESIASEAASYALSSNDIS 269
Query: 313 -----------------LKLQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKRE 355
++LQ + +E+ + L G+ K
Sbjct: 270 GCISEVDTFIRALQNNSVQLQAGSNLTMESTQTLRALFMEINKGLNGFPLSSSGGFTK-- 327
Query: 356 FQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVITLE 415
G ++ N++ + P++L + I+ A + S + L+
Sbjct: 328 --------PGQYIFEFFEQFNVNFETCPLVLNMIEEIIEVAHGGDD-----SQRAASKLD 374
Query: 416 GLFSSLTYFFSRNGSHVS---DYQLALQKYIKRDSK-----NPGGN---WTHTLSLWCLN 464
+ S L F H+ +Y++ +Q+ +R S N G N T + WC +
Sbjct: 375 TMLSFLGTIFRSKEQHLQAAKNYRVHIQEVRERPSNAGRLFNGGRNKKTTTRVFNYWCFH 434
Query: 465 PAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVIST 523
P V F+++ ++ ++ILTSGTLSP+++ ELG+ F LE HV+D D QV V+ T
Sbjct: 435 PGVAFREICANNVHNVILTSGTLSPLDTTVKELGIDFPVRLENNHVVDAD-QVWVGVVGT 493
Query: 524 GPDNYPLNASYKTAD----------------------------GYKLMEKLCNRWRETGQ 555
G LN+SY Y ++E+ ++W+
Sbjct: 494 GVTGKRLNSSYNFRSTETYLLELGNTIVNFTRLVPHGLLVFFPSYSILEESIDKWKRPAA 553
Query: 556 -------WSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNN 608
W R+ +K FVEP+G + DF+ V+ Y+ +I+
Sbjct: 554 GESALSIWDRIVQQKQTFVEPRG--RADFKAVVDEYHQAITD------------------ 593
Query: 609 DLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKK 653
N KGA F AVCRGK ++ G+PFP D ++ LKK
Sbjct: 594 -----------NPKGAVFFAVCRGKVSEGIDFSNDKGRAVVITGLPFPPTKDPKIVLKKS 642
Query: 654 YND--TYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAH 711
D + L+GN WY QA RA+NQAIGR IRHR DYGAIILLDERF ++ +
Sbjct: 643 ILDEAMVPPGELKLTGNAWYIQQASRAVNQAIGRVIRHRHDYGAIILLDERFVLKQQQEC 702
Query: 712 ISKWLRKSIKQYDSFDASLEGLKSFFRDVKG 742
+SKWL+ + S GL FF++ K
Sbjct: 703 LSKWLQPYCHTCRGYGESHIGLTRFFKNNKA 733
>gi|303388455|ref|XP_003072462.1| Rad3/XPD ATP-dependent DNA-binding helicase [Encephalitozoon
intestinalis ATCC 50506]
gi|303301602|gb|ADM11102.1| Rad3/XPD ATP-dependent DNA-binding helicase [Encephalitozoon
intestinalis ATCC 50506]
Length = 678
Score = 307 bits (786), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 227/753 (30%), Positives = 367/753 (48%), Gaps = 111/753 (14%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ G+ +E P++PY +Q+V M ++IS L L+ESPTGTGKSLS++C+ L +
Sbjct: 6 ISGVPIEMPFEPYPAQIVTMTKLISCLTTG-----TSGLVESPTGTGKSLSIICAVLGYS 60
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVK 139
+ K + N+ + GG S G+ A
Sbjct: 61 EYLKRGAKSINVKRRE-------------GG------------SLKGEEA---------- 85
Query: 140 KKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEECKL 199
K+ I SRTH Q+ Q+I + +KT YR +++LASR YC + + D + + C
Sbjct: 86 KEEKLKIIICSRTHKQLDQLIEQLRKTHYRPRISILASRSQYCISPKLGDVTDKNTGCNE 145
Query: 200 LLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDA 259
L+ ++ C F G L K + DIE+L G+ GC YYA+R + +DA
Sbjct: 146 LV--KSGSCAYFT------GKDRLAKRVGDRIFDIEELKGEGRRCGGCPYYASRILNEDA 197
Query: 260 QLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMEL 319
+++F PY+Y+I+ IR + ++ +++I+DEAHNIED+ R +GS+++ + +Q E+
Sbjct: 198 EVIFAPYNYLIDSRIRENTGISLENSVVIVDEAHNIEDVCRSSGSIELSSRTIEIIQNEI 257
Query: 320 EQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALR--------- 370
+ M L E+ D V ++ + E F T LR
Sbjct: 258 LGAIRRSGM----LGEIKLDFVNLMDFFRKLREGAESTDGFDRTTFGGKLRIRKGKEIKD 313
Query: 371 ELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGS 430
EL++ I+++ F + ++ + AI++ D + +L ++S V LEGL S L+ + + S
Sbjct: 314 ELEKMGITKE-FVLKIKNSIYAIQKNEDAK-DLLNMSTFHV--LEGLDSVLS---AIHFS 366
Query: 431 HVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMN 490
Y QK + +N + + + W L+ F+ SI+L SGTL+P +
Sbjct: 367 GCDAYSFVFQKTNDENIRNSRLS-KFSYNFWLLDAGYTFRSFVGKVRSIVLLSGTLTPFS 425
Query: 491 SFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTADGYKLMEKL---- 546
SFSSELG F + APH++ + QV S + G L +Y +D + +++L
Sbjct: 426 SFSSELGHDFTHSIVAPHLV-TEKQVFASCVRKGHLLKDLTGTYGVSDTPQYLDQLSRII 484
Query: 547 ---CNRWRETG-------QWSRL-NAKK-------PLFVEPKGGSQEDFEIVLKHYYNSI 588
N+ + G +S L N +K L +EPK G +FE V+K Y N I
Sbjct: 485 VDVSNKVKSHGGTLVFVPSYSFLENLQKRMGGESSGLLIEPKSGGGNEFEKVMKRYKNRI 544
Query: 589 SQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQV 648
+ + + R K D + R I VGIP+P+++D QV
Sbjct: 545 ATKQRAIFMCVYRGKASEGIDFKD---------------SFARAVIAVGIPYPSLHDPQV 589
Query: 649 SLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERN 708
LKK++ND Y+S +G WY QAFRA+NQA+GR IRH+ D+G ++LLD R+ E+R
Sbjct: 590 ELKKEFNDRYKS----FNGRLWYEAQAFRAVNQALGRAIRHKDDWGIVMLLDSRYSEKRV 645
Query: 709 RAHISKWLRKSIKQYDSFDASLEGLKSFFRDVK 741
+ H+SKW+ +I+ +DS+D L F +K
Sbjct: 646 QTHLSKWVTDNIRVHDSYDTCASELSGFLSLIK 678
>gi|81872267|sp|Q6H1L8.1|RTEL1_MUSSP RecName: Full=Regulator of telomere elongation helicase 1
gi|38707220|gb|AAR27228.1| DEAH helicase isoform 2 [Mus spretus]
Length = 1203
Score = 307 bits (786), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 245/819 (29%), Positives = 369/819 (45%), Gaps = 174/819 (21%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ G+ V+FP+QPY Q +M +V+ L + + +LESPTGTGK+L LLCSTLAWQ
Sbjct: 6 LNGVTVDFPFQPYPCQQEYMTKVLECLQKK-----VNGILESPTGTGKTLCLLCSTLAWQ 60
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVK 139
Q+ L++ ++++ ++ Q T A + +
Sbjct: 61 QH--LRDAISSLKIAE------------------RVQGELFASRTLSSWGSAAAASGDSI 100
Query: 140 KKMT--PTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE- 196
+ T P I YASRTHSQ +QVI E + TAYR + VL SR+ C + V+ +E+ +
Sbjct: 101 ECYTDIPKIIYASRTHSQPTQVIRELRNTAYRPKVCVLGSREQLCIHPEVKKQESNHMQI 160
Query: 197 --CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARS 254
C+ + R+ C + NV L++ + DIEDLV G + C YY +R+
Sbjct: 161 SLCRKKVASRS--CHFYNNVEA----KFLEQDLATPILDIEDLVKNGSKQKMCPYYLSRN 214
Query: 255 MADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDID-EDVLL 313
M A ++F PY+Y+++ R A +D+KG ++I DEAHN+E I ++ S D+ DV
Sbjct: 215 MKQQADIIFMPYNYLLDAKSRKAHSIDLKGTVVIFDEAHNVEKICEESASFDLTPRDVAS 274
Query: 314 KLQMELEQVCSVNPMIYQPLIEMTQDLV------GW------IERRKATLAKREFQHFFS 361
L++ + QV + Q E+ Q+ + G I + K L + E
Sbjct: 275 GLEI-INQVLEEQARVTQQ-GELQQEFIVDTSSSGLNMELEDIAKLKMILLRLEEAIDAV 332
Query: 362 CWTGDK---------ALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVI 412
GD EA I+ Q +LE + I+ HL+G + +
Sbjct: 333 QLPGDDRGVTKPGSYIFELFAEAQITFQTKGCILESLDQIIQ----------HLAGRTGV 382
Query: 413 -----TLEGLFSSLTYFFSRN---GSHVSDYQLALQKYIK---------RDSKNPGGNWT 455
L+ L + FS + GS S L + K R + W+
Sbjct: 383 FTNTAGLQKLMDIIQIVFSVDPPEGSPGSLVGLGISHSYKVHIHPETSHRRAAKRSDAWS 442
Query: 456 HT--------LSLWCLNPAVVFKD-VAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEA 506
T LS WC +P+ ++ V + ++ILTSGTL+P++SF+ E + F CLE
Sbjct: 443 TTASRKQGKVLSYWCFSPSQSMRELVCQGVRTLILTSGTLAPLSSFALEKQIPFPVCLEN 502
Query: 507 PHVIDVDLQVLTSVISTGPDNYPLNASYKTA----------------------------D 538
PH+ID + Q+ ++ GPD L+++Y
Sbjct: 503 PHIIDKN-QLWVGIVPRGPDGVQLSSAYDKRFSEECLSSLGKALSNIARVVPHGLLVFFP 561
Query: 539 GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVR 598
Y +MEK W+ G ++ A KPLFVEP+ ++ F V+ YY ++
Sbjct: 562 SYPVMEKSLEFWQVQGLARKVEALKPLFVEPR--NKGSFSEVIDAYYQQVA--------- 610
Query: 599 KKRVKREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNI 643
+ GA+FLAVCRGK IV G+P+P
Sbjct: 611 -------------------SPASNGATFLAVCRGKASEGLDFSDMNGRGVIVTGLPYPPR 651
Query: 644 NDIQVSLKKKYNDTYRSSKNL----LSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILL 699
D +V LK ++ D R + LSG EWY QA RA+NQAIGR IRHR DYGAI L
Sbjct: 652 MDPRVVLKMQFLDEMRGRSGVGGQCLSGQEWYQQQASRAVNQAIGRVIRHRHDYGAIFLC 711
Query: 700 DERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
D RF RA + W+R +K YD+F ++ + F R
Sbjct: 712 DHRFAYADARAQLPSWVRPYLKVYDNFGHAIRDVAQFLR 750
>gi|46452191|gb|AAS98192.1| DEAH helicase isoform 1 [Mus spretus]
Length = 1209
Score = 306 bits (785), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 244/817 (29%), Positives = 369/817 (45%), Gaps = 170/817 (20%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ G+ V+FP+QPY Q +M +V+ L + + +LESPTGTGK+L LLCSTLAWQ
Sbjct: 6 LNGVTVDFPFQPYPCQQEYMTKVLECLQKK-----VNGILESPTGTGKTLCLLCSTLAWQ 60
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVK 139
Q+ L++ ++++ ++ G F + S + + +
Sbjct: 61 QH--LRDAISSLKIAE---------RVQGELFASRTLSSWGSAAAASGDSIECYTD---- 105
Query: 140 KKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE--- 196
P I YASRTHSQ +QVI E + TAYR + VL SR+ C + V+ +E+ +
Sbjct: 106 ---IPKIIYASRTHSQPTQVIRELRNTAYRPKVCVLGSREQLCIHPEVKKQESNHMQISL 162
Query: 197 CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMA 256
C+ + R+ C + NV L++ + DIEDLV G + C YY +R+M
Sbjct: 163 CRKKVASRS--CHFYNNVEA----KFLEQDLATPILDIEDLVKNGSKQKMCPYYLSRNMK 216
Query: 257 DDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDID-EDVLLKL 315
A ++F PY+Y+++ R A +D+KG ++I DEAHN+E I ++ S D+ DV L
Sbjct: 217 QQADIIFMPYNYLLDAKSRKAHSIDLKGTVVIFDEAHNVEKICEESASFDLTPRDVASGL 276
Query: 316 QMELEQVCSVNPMIYQPLIEMTQDLV------GW------IERRKATLAKREFQHFFSCW 363
++ + QV + Q E+ Q+ + G I + K L + E
Sbjct: 277 EI-INQVLEEQARVTQQ-GELQQEFIVDTSSSGLNMELEDIAKLKMILLRLEEAIDAVQL 334
Query: 364 TGDK---------ALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVI-- 412
GD EA I+ Q +LE + I+ HL+G + +
Sbjct: 335 PGDDRGVTKPGSYIFELFAEAQITFQTKGCILESLDQIIQ----------HLAGRTGVFT 384
Query: 413 ---TLEGLFSSLTYFFSRN---GSHVSDYQLALQKYIK---------RDSKNPGGNWTHT 457
L+ L + FS + GS S L + K R + W+ T
Sbjct: 385 NTAGLQKLMDIIQIVFSVDPPEGSPGSLVGLGISHSYKVHIHPETSHRRAAKRSDAWSTT 444
Query: 458 --------LSLWCLNPAVVFKD-VAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPH 508
LS WC +P+ ++ V + ++ILTSGTL+P++SF+ E + F CLE PH
Sbjct: 445 ASRKQGKVLSYWCFSPSQSMRELVCQGVRTLILTSGTLAPLSSFALEKQIPFPVCLENPH 504
Query: 509 VIDVDLQVLTSVISTGPDNYPLNASYKTA----------------------------DGY 540
+ID + Q+ ++ GPD L+++Y Y
Sbjct: 505 IIDKN-QLWVGIVPRGPDGVQLSSAYDKRFSEECLSSLGKALSNIARVVPHGLLVFFPSY 563
Query: 541 KLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKK 600
+MEK W+ G ++ A KPLFVEP+ ++ F V+ YY ++
Sbjct: 564 PVMEKSLEFWQVQGLARKVEALKPLFVEPR--NKGSFSEVIDAYYQQVA----------- 610
Query: 601 RVKREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNIND 645
+ GA+FLAVCRGK IV G+P+P D
Sbjct: 611 -----------------SPASNGATFLAVCRGKASEGLDFSDMNGRGVIVTGLPYPPRMD 653
Query: 646 IQVSLKKKYNDTYRSSKNL----LSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDE 701
+V LK ++ D R + LSG EWY QA RA+NQAIGR IRHR DYGAI L D
Sbjct: 654 PRVVLKMQFLDEMRGRSGVGGQCLSGQEWYQQQASRAVNQAIGRVIRHRHDYGAIFLCDH 713
Query: 702 RFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
RF RA + W+R +K YD+F ++ + F R
Sbjct: 714 RFAYADARAQLPSWVRPYLKVYDNFGHAIRDVAQFLR 750
>gi|332858954|ref|XP_003317100.1| PREDICTED: regulator of telomere elongation helicase 1 isoform 1
[Pan troglodytes]
gi|410301716|gb|JAA29458.1| regulator of telomere elongation helicase 1 [Pan troglodytes]
gi|410341613|gb|JAA39753.1| regulator of telomere elongation helicase 1 [Pan troglodytes]
Length = 1220
Score = 306 bits (784), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 244/813 (30%), Positives = 368/813 (45%), Gaps = 166/813 (20%)
Query: 22 GIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQN 81
G+ V+FP+QPY Q +M +V+ L + + +LESPTGTGK+L LLC+TLAW+++
Sbjct: 8 GVTVDFPFQPYKCQQEYMTKVLECLQQ-----KVNGILESPTGTGKTLCLLCTTLAWREH 62
Query: 82 CKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKK 141
+ IS K A G P+ S+ + +A
Sbjct: 63 LR-----DGISARKIAERAQ-------GELFPDRALSSWGNAAAAAGDPIACYTD----- 105
Query: 142 MTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE---CK 198
P I YASRTHSQ++QVI+E + T+YR + VL SR+ C + V+ +E+ + C+
Sbjct: 106 -IPKIIYASRTHSQLTQVINELRNTSYRPKVCVLGSREQLCIHPEVKKQESNHLQIHLCR 164
Query: 199 LLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADD 258
+ R+ C + NV + SL++ + DIEDLV G R C YY +R++
Sbjct: 165 KKVASRS--CHFYNNVEEK----SLEQELASPILDIEDLVKSGSKHRVCPYYLSRNLKQQ 218
Query: 259 AQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDE--------- 309
A ++F PY+Y+++ R A +D+KG ++I DEAHN+E + ++ S D+
Sbjct: 219 ADIIFMPYNYLLDAKSRRAHNIDLKGTVVIFDEAHNVEKMCEESASFDLTPHDLASGLDV 278
Query: 310 -DVLLKLQMELEQVCSVNPMIY----QPLIEMTQDLVGWIE----RRKATLAKREFQHFF 360
D +L+ Q + Q +P P + M + + ++ R + + E
Sbjct: 279 IDQVLEEQTKAAQQGEPHPEFSTDSPSPGLNMELEDIAKLKMILLRLEGAIDAVELPGDD 338
Query: 361 SCWT--GDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVI-----T 413
S T G EA I+ Q +L+ + I+ HL+G + +
Sbjct: 339 SGVTKPGSYIFELFAEAQITFQTKGCILDSLDQIIQ----------HLAGRAGVFTNTAG 388
Query: 414 LEGLFSSLTYFFSRN---GSHVSDYQL-ALQKYI--------KRDSKNPGGNWTHT---- 457
L+ L + FS + GS S L ALQ Y R + W+ T
Sbjct: 389 LQKLADIIQIVFSVDPSEGSPGSPAGLGALQSYKVHIHPDAGHRRTAQRSDAWSTTAARK 448
Query: 458 ----LSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDV 512
LS WC +P +++ + S+ILTSGTL+P++SF+ E+ + F CLE PH+ID
Sbjct: 449 RGKVLSYWCFSPGHSMRELLRQGVRSLILTSGTLAPVSSFALEMQIPFPVCLENPHIIDK 508
Query: 513 DLQVLTSVISTGPDNYPLNASYKTA----------------------------DGYKLME 544
Q+ V+ GPD L++++ Y +ME
Sbjct: 509 H-QIWVGVVPRGPDGAQLSSAFDRRFSEECLSSLGKALGNIARVVPYGLLIFFPSYPVME 567
Query: 545 KLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKR 604
K WR ++ A KPLFVEP+ S+ F + YY RV
Sbjct: 568 KSLEFWRARDLARKMEALKPLFVEPR--SKGGFSETISAYY--------------ARVAA 611
Query: 605 EGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVS 649
G+ GA+FLAVCRGK IV G+P+P D +V
Sbjct: 612 PGST--------------GATFLAVCRGKASEGLDFSDTNGRGVIVTGLPYPPRMDPRVV 657
Query: 650 LKKKYNDTYR----SSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQE 705
LK ++ D + + LSG EWY QA RA+NQAIGR IRHR DYGA+ L D RF
Sbjct: 658 LKMQFLDEMKGQGGAGGQFLSGQEWYRQQASRAVNQAIGRVIRHRQDYGAVFLCDHRFAF 717
Query: 706 ERNRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
RA + W+R ++ YD+F + + FFR
Sbjct: 718 ADARAQLPSWVRPHVRVYDNFGHVIRDVAQFFR 750
>gi|410219260|gb|JAA06849.1| regulator of telomere elongation helicase 1 [Pan troglodytes]
gi|410263662|gb|JAA19797.1| regulator of telomere elongation helicase 1 [Pan troglodytes]
Length = 1220
Score = 306 bits (784), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 244/813 (30%), Positives = 368/813 (45%), Gaps = 166/813 (20%)
Query: 22 GIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQN 81
G+ V+FP+QPY Q +M +V+ L + + +LESPTGTGK+L LLC+TLAW+++
Sbjct: 8 GVTVDFPFQPYKCQQEYMTKVLECLQQ-----KVNGILESPTGTGKTLCLLCTTLAWREH 62
Query: 82 CKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKK 141
+ IS K A G P+ S+ + +A
Sbjct: 63 LR-----DGISARKIAERAQ-------GELFPDRALSSWGNAAAAAGDPIACYTD----- 105
Query: 142 MTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE---CK 198
P I YASRTHSQ++QVI+E + T+YR + VL SR+ C + V+ +E+ + C+
Sbjct: 106 -IPKIIYASRTHSQLTQVINELRNTSYRPKVCVLGSREQLCIHPEVKKQESNHLQIHLCR 164
Query: 199 LLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADD 258
+ R+ C + NV + SL++ + DIEDLV G R C YY +R++
Sbjct: 165 KKVASRS--CHFYNNVEEK----SLEQELASPILDIEDLVKSGSKHRVCPYYLSRNLKQQ 218
Query: 259 AQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDE--------- 309
A ++F PY+Y+++ R A +D+KG ++I DEAHN+E + ++ S D+
Sbjct: 219 ADIIFMPYNYLLDAKSRRAHNIDLKGTVVIFDEAHNVEKMCEESASFDLTPHDLASGLDV 278
Query: 310 -DVLLKLQMELEQVCSVNPMIY----QPLIEMTQDLVGWIE----RRKATLAKREFQHFF 360
D +L+ Q + Q +P P + M + + ++ R + + E
Sbjct: 279 IDQVLEEQTKAAQQGEPHPEFSTDSPSPGLNMELEDIAKLKMILLRLEGAIDAVELPGDD 338
Query: 361 SCWT--GDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVI-----T 413
S T G EA I+ Q +L+ + I+ HL+G + +
Sbjct: 339 SGVTKPGSYIFELFAEAQITFQTKGCILDSLDQIIQ----------HLAGRAGVFTNTAG 388
Query: 414 LEGLFSSLTYFFSRN---GSHVSDYQL-ALQKYI--------KRDSKNPGGNWTHT---- 457
L+ L + FS + GS S L ALQ Y R + W+ T
Sbjct: 389 LQKLADIIQIVFSVDPSEGSPGSPAGLGALQSYKVHIHPDAGHRRTAQRSDAWSTTAARK 448
Query: 458 ----LSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDV 512
LS WC +P +++ + S+ILTSGTL+P++SF+ E+ + F CLE PH+ID
Sbjct: 449 RGKVLSYWCFSPGHSMRELLRQGVRSLILTSGTLAPVSSFALEMQIPFPVCLENPHIIDK 508
Query: 513 DLQVLTSVISTGPDNYPLNASYKTA----------------------------DGYKLME 544
Q+ V+ GPD L++++ Y +ME
Sbjct: 509 H-QIWVGVVPRGPDGAQLSSAFDRRFSEECLSSLGKALGNIARVVPYGLLIFFPSYPVME 567
Query: 545 KLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKR 604
K WR ++ A KPLFVEP+ S+ F + YY RV
Sbjct: 568 KSLEFWRARDLARKMEALKPLFVEPR--SKGGFSETISAYY--------------ARVAA 611
Query: 605 EGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVS 649
G+ GA+FLAVCRGK IV G+P+P D +V
Sbjct: 612 PGST--------------GATFLAVCRGKASEGLDFSDTNGRGVIVTGLPYPPRMDPRVV 657
Query: 650 LKKKYNDTYR----SSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQE 705
LK ++ D + + LSG EWY QA RA+NQAIGR IRHR DYGA+ L D RF
Sbjct: 658 LKMQFLDEMKGQGGAGGQFLSGQEWYRQQASRAVNQAIGRVIRHRQDYGAVFLCDHRFAF 717
Query: 706 ERNRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
RA + W+R ++ YD+F + + FFR
Sbjct: 718 ADARAQLPSWVRPHVRVYDNFGHVIRDVAQFFR 750
>gi|260789809|ref|XP_002589937.1| hypothetical protein BRAFLDRAFT_231064 [Branchiostoma floridae]
gi|229275123|gb|EEN45948.1| hypothetical protein BRAFLDRAFT_231064 [Branchiostoma floridae]
Length = 823
Score = 306 bits (783), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 248/820 (30%), Positives = 373/820 (45%), Gaps = 164/820 (20%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
V G+ VEFP++PY Q +M +VI L + +LESPTGTGK+L LLC+TLAW+
Sbjct: 6 VRGVDVEFPFEPYACQRSYMEKVIQCLQEG-----TNGVLESPTGTGKTLCLLCATLAWR 60
Query: 80 QNCKLKNQLANISHSKPDTE----AVTDPLAN--GGGFIPESQPSTIPPSTNGQTAQVAM 133
K Q + E + LAN GG + G T Q A
Sbjct: 61 SAYVAKMQFEGLKQQFTKDEDGQSTYGELLANQLGGA------------AGWGNTEQAAG 108
Query: 134 NNKNVKKKMTPTIFYASRTHSQISQVISEYKKTAY-RVPMAVLASRKHYCTNKYVRDKEN 192
+ P I YASRTHSQ+SQ ++E K T+Y + + +L SR+ C + V+++ N
Sbjct: 109 PFMEI-----PKIIYASRTHSQLSQAVAELKNTSYSNLKVCILGSREQLCIHPEVQEQTN 163
Query: 193 IDEE---CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSY 249
+ CK R C + N+ +K DIEDLV VG+ + C Y
Sbjct: 164 NSTKVHMCKAKTSSRL--CTFYNNLD------GNEKEFTEAPLDIEDLVKVGKKHKVCPY 215
Query: 250 YAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDI-- 307
+ AR + A ++F PY+Y+++P R A VD+K I++ DEAHN+E + ++ S D+
Sbjct: 216 FMARELKSSADIIFMPYNYLLDPKSRKAHSVDLKSHIVVFDEAHNLEKMCEESSSFDLTS 275
Query: 308 --------DEDVLLKLQMELEQV-------CSVNPMI----YQPLIEMTQDLVGWIERRK 348
+ D L K E+E + S + ++ + L+ ++ LVG + +
Sbjct: 276 YDLASCVEELDNLHKSVAEIEVLNEKFHTESSTHGLVCLYDFYFLLNVSF-LVGMLLELE 334
Query: 349 ATLAKREFQHFFSCWT--GDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHL 406
+ + T G E I+ PILLE K + AT T + +
Sbjct: 335 KKIDSLPLPANGTGLTRPGSFIYELFAELQITFDTAPILLEVLDKVVAYAT-TNTGTSVV 393
Query: 407 SGMSVITLEGLFSSLTYFFSRN------GSHVSDYQLALQK-YIK------RDSKNPGGN 453
G + L L FS + GS +++ K Y+K + SK
Sbjct: 394 FGNKAAGVSKLGDVLKIAFSHDSSASQKGSKLANLMAKYYKVYVKTEEGFQKKSKANADP 453
Query: 454 WT-----------HTLSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFG 501
W TLS WC +P +D+A + SIILTSGTLSP+ SF++E+ + F
Sbjct: 454 WATTSSSKPKKQGRTLSYWCFSPGHAMQDLANHGVRSIILTSGTLSPLESFTAEMHIDFP 513
Query: 502 TCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTAD----------------------- 538
LE PHVI+ QV +++ GPD LN+SY+ +
Sbjct: 514 VHLENPHVIERH-QVWLGMVTKGPDGVRLNSSYENRNSTDYINSLGNAIVNFARIVPNGL 572
Query: 539 -----GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSK 593
Y +M K W+++G +R++ K + VEP+G +Q F ++ +Y I+ +
Sbjct: 573 LVFFPSYPVMNKCLEVWQDSGISNRISQYKTMVVEPRGKTQ--FVEAMEQFYEKINDPT- 629
Query: 594 CAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGI 638
LN GA+F AVCRGK ++ G+
Sbjct: 630 ----------------LN-----------GAAFFAVCRGKVSEGLDFADINGRAVVITGL 662
Query: 639 PFPNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIIL 698
PFP D +V LK + D +++ L+G +WY QA RA+NQAIGR IRHR DYGAI+L
Sbjct: 663 PFPPRMDPKVMLKMSFLDEGKTASKGLTGRQWYRQQASRAVNQAIGRVIRHRQDYGAILL 722
Query: 699 LDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
D RF RA + W+R Y++F +++ L SFF+
Sbjct: 723 CDHRFTYADARAQLPSWVRPYATTYNTFGHAIKDLISFFK 762
>gi|38707228|gb|AAR27232.1| DEAH helicase isoform 6 [Mus spretus]
Length = 1128
Score = 306 bits (783), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 245/819 (29%), Positives = 369/819 (45%), Gaps = 174/819 (21%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ G+ V+FP+QPY Q +M +V+ L + + +LESPTGTGK+L LLCSTLAWQ
Sbjct: 6 LNGVTVDFPFQPYPCQQEYMTKVLECLQKK-----VNGILESPTGTGKTLCLLCSTLAWQ 60
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVK 139
Q+ L++ ++++ ++ Q T A + +
Sbjct: 61 QH--LRDAISSLKIAE------------------RVQGELFASRTLSSWGSAAAASGDSI 100
Query: 140 KKMT--PTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE- 196
+ T P I YASRTHSQ +QVI E + TAYR + VL SR+ C + V+ +E+ +
Sbjct: 101 ECYTDIPKIIYASRTHSQPTQVIRELRNTAYRPKVCVLGSREQLCIHPEVKKQESNHMQI 160
Query: 197 --CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARS 254
C+ + R+ C + NV L++ + DIEDLV G + C YY +R+
Sbjct: 161 SLCRKKVASRS--CHFYNNVEA----KFLEQDLATPILDIEDLVKNGSKQKMCPYYLSRN 214
Query: 255 MADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDID-EDVLL 313
M A ++F PY+Y+++ R A +D+KG ++I DEAHN+E I ++ S D+ DV
Sbjct: 215 MKQQADIIFMPYNYLLDAKSRKAHSIDLKGTVVIFDEAHNVEKICEESASFDLTPRDVAS 274
Query: 314 KLQMELEQVCSVNPMIYQPLIEMTQDLV------GW------IERRKATLAKREFQHFFS 361
L++ + QV + Q E+ Q+ + G I + K L + E
Sbjct: 275 GLEI-INQVLEEQARVTQQ-GELQQEFIVDTSSSGLNMELEDIAKLKMILLRLEEAIDAV 332
Query: 362 CWTGDK---------ALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVI 412
GD EA I+ Q +LE + I+ HL+G + +
Sbjct: 333 QLPGDDRGVTKPGSYIFELFAEAQITFQTKGCILESLDQIIQ----------HLAGRTGV 382
Query: 413 -----TLEGLFSSLTYFFSRN---GSHVSDYQLALQKYIK---------RDSKNPGGNWT 455
L+ L + FS + GS S L + K R + W+
Sbjct: 383 FTNTAGLQKLMDIIQIVFSVDPPEGSPGSLVGLGISHSYKVHIHPETSHRRAAKRSDAWS 442
Query: 456 HT--------LSLWCLNPAVVFKD-VAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEA 506
T LS WC +P+ ++ V + ++ILTSGTL+P++SF+ E + F CLE
Sbjct: 443 TTASRKQGKVLSYWCFSPSQSMRELVCQGVRTLILTSGTLAPLSSFALEKQIPFPVCLEN 502
Query: 507 PHVIDVDLQVLTSVISTGPDNYPLNASYKTA----------------------------D 538
PH+ID + Q+ ++ GPD L+++Y
Sbjct: 503 PHIIDKN-QLWVGIVPRGPDGVQLSSAYDKRFSEECLSSLGKALSNIARVVPHGLLVFFP 561
Query: 539 GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVR 598
Y +MEK W+ G ++ A KPLFVEP+ ++ F V+ YY ++
Sbjct: 562 SYPVMEKSLEFWQVQGLARKVEALKPLFVEPR--NKGSFSEVIDAYYQQVA--------- 610
Query: 599 KKRVKREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNI 643
+ GA+FLAVCRGK IV G+P+P
Sbjct: 611 -------------------SPASNGATFLAVCRGKASEGLDFSDMNGRGVIVTGLPYPPR 651
Query: 644 NDIQVSLKKKYNDTYRSSKNL----LSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILL 699
D +V LK ++ D R + LSG EWY QA RA+NQAIGR IRHR DYGAI L
Sbjct: 652 MDPRVVLKMQFLDEMRGRSGVGGQCLSGQEWYQQQASRAVNQAIGRVIRHRHDYGAIFLC 711
Query: 700 DERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
D RF RA + W+R +K YD+F ++ + F R
Sbjct: 712 DHRFAYADARAQLPSWVRPYLKVYDNFGHAIRDVAQFLR 750
>gi|145345288|ref|XP_001417148.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577375|gb|ABO95441.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 938
Score = 306 bits (783), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 235/805 (29%), Positives = 361/805 (44%), Gaps = 183/805 (22%)
Query: 12 RKPLNAYHVGGIQVEFP--YQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSL 69
R+ +GG +V+FP P+ +Q + M +I L + + HA++ESPTGTGK+L
Sbjct: 119 RREFTTKAIGGCKVKFPEGLNPHPAQTMTMSSIIRALTKRE-----HAMIESPTGTGKTL 173
Query: 70 SLLCSTLAWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTA 129
+LLC LAWQ+ V + G+ E QTA
Sbjct: 174 ALLCGALAWQER------------------EVALSMEKNKGYWSEKMKY--------QTA 207
Query: 130 QVAMNNKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRD 189
+ A + IF SRTHSQI+Q++ E K+T Y +VL+SR+ C
Sbjct: 208 RNAYKD---------AIFICSRTHSQINQILRELKRTGYSPRYSVLSSRQRMCP------ 252
Query: 190 KENIDEECKLLLGDRNLGCPQ--------FKNVHK-----VRGHPSL-QKGGCHEVHDIE 235
E D +CK LLG G Q F N HK + +P ++G D+E
Sbjct: 253 MEKNDAQCKELLG---TGVAQQSGRTACGFFNRHKHVSSNMERYPKAGEEGMFPSAWDME 309
Query: 236 DLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNI 295
D V + GCS+YA R M A L+FCPY+Y+ + IR M++D+K A +I+DE HN+
Sbjct: 310 DFERVVNEIEGCSFYALREMVKTADLIFCPYNYLFDVNIRRKMKIDLKDAAVIIDEGHNL 369
Query: 296 EDIARDAGSVDIDEDVLLKLQMELEQV-------CSVNPMIYQPLIEMTQDLVGWIERRK 348
ED+ R+ S++ D + K EL + S+ ++ + + L
Sbjct: 370 EDVCREGSSIEFSLDTIGKGMDELSKTWGKINNETSLIARFFRAISAFMEGLFCTNTAPT 429
Query: 349 ATLAKREFQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESEL--PHL 406
+ + ++F + L+ N + +++ K + E ++ S + PH
Sbjct: 430 TVIQSNQLEYFVNDM--------LKTFNAVGEYTQDIIDVVEKLLTEDSNLMSPIIAPH- 480
Query: 407 SGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPA 466
IT G L H + Y + + ++ D G+ + + C+ P+
Sbjct: 481 -----ITFAG---DLAEVLQNAVKHAAAYNIFIGSRVEID-----GDECPGMVIQCMKPS 527
Query: 467 VVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPD 526
V F VAE + S+I+TSGTLSPMN+F +EL +F T +EAPHV+ D + + G
Sbjct: 528 VAFHAVAEKARSVIITSGTLSPMNTFEAELAEKFPTKIEAPHVVPNDHVYVEVTSAIG-- 585
Query: 527 NYPLNASYKTADG--------------------------------YKLMEKLCNRWRETG 554
+YK DG Y L++++ W TG
Sbjct: 586 ----EVTYKATDGHVQGPKFAKKLGEYLLKYAQVIPGGMLVFLPKYSLIDRVLREWHVTG 641
Query: 555 QWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIE 614
+ ++N K + VE +G F+ L N+ N
Sbjct: 642 LFGKMNDYKRVVVETRGA--RGFQDTL--------------------------NEFNL-- 671
Query: 615 SQENANKKGASFLAVCRGKI---------------VVGIPFPNINDIQVSLKKKYNDTYR 659
N N KG+ LAV RGK+ VGIPFP++ DI+V KK++ND
Sbjct: 672 --GNTNGKGSLMLAVYRGKVSEGIDFKDDSARAVFCVGIPFPSVYDIKVKAKKEFNDLPV 729
Query: 660 S-SKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRA-HISKWLR 717
S ++ +LSG EWY QA+RA NQA+GRCIRH DY A+ L+D RF+E R +ISKW+R
Sbjct: 730 SRAQGMLSGGEWYRAQAYRAYNQALGRCIRHPKDYAALFLVDSRFRESRWMLNNISKWIR 789
Query: 718 KSIKQYDSFDASLEGLKSFFRDVKG 742
+ + D + S+ + FF+ ++G
Sbjct: 790 NNAQASDDVNQSVRVVDGFFKRLRG 814
>gi|38707224|gb|AAR27230.1| DEAH helicase isoform 4 [Mus spretus]
Length = 1165
Score = 306 bits (783), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 245/819 (29%), Positives = 369/819 (45%), Gaps = 174/819 (21%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ G+ V+FP+QPY Q +M +V+ L + + +LESPTGTGK+L LLCSTLAWQ
Sbjct: 6 LNGVTVDFPFQPYPCQQEYMTKVLECLQKK-----VNGILESPTGTGKTLCLLCSTLAWQ 60
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVK 139
Q+ L++ ++++ ++ Q T A + +
Sbjct: 61 QH--LRDAISSLKIAE------------------RVQGELFASRTLSSWGSAAAASGDSI 100
Query: 140 KKMT--PTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE- 196
+ T P I YASRTHSQ +QVI E + TAYR + VL SR+ C + V+ +E+ +
Sbjct: 101 ECYTDIPKIIYASRTHSQPTQVIRELRNTAYRPKVCVLGSREQLCIHPEVKKQESNHMQI 160
Query: 197 --CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARS 254
C+ + R+ C + NV L++ + DIEDLV G + C YY +R+
Sbjct: 161 SLCRKKVASRS--CHFYNNVEA----KFLEQDLATPILDIEDLVKNGSKQKMCPYYLSRN 214
Query: 255 MADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDID-EDVLL 313
M A ++F PY+Y+++ R A +D+KG ++I DEAHN+E I ++ S D+ DV
Sbjct: 215 MKQQADIIFMPYNYLLDAKSRKAHSIDLKGTVVIFDEAHNVEKICEESASFDLTPRDVAS 274
Query: 314 KLQMELEQVCSVNPMIYQPLIEMTQDLV------GW------IERRKATLAKREFQHFFS 361
L++ + QV + Q E+ Q+ + G I + K L + E
Sbjct: 275 GLEI-INQVLEEQARVTQQ-GELQQEFIVDTSSSGLNMELEDIAKLKMILLRLEEAIDAV 332
Query: 362 CWTGDK---------ALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVI 412
GD EA I+ Q +LE + I+ HL+G + +
Sbjct: 333 QLPGDDRGVTKPGSYIFELFAEAQITFQTKGCILESLDQIIQ----------HLAGRTGV 382
Query: 413 -----TLEGLFSSLTYFFSRN---GSHVSDYQLALQKYIK---------RDSKNPGGNWT 455
L+ L + FS + GS S L + K R + W+
Sbjct: 383 FTNTAGLQKLMDIIQIVFSVDPPEGSPGSLVGLGISHSYKVHIHPETSHRRAAKRSDAWS 442
Query: 456 HT--------LSLWCLNPAVVFKD-VAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEA 506
T LS WC +P+ ++ V + ++ILTSGTL+P++SF+ E + F CLE
Sbjct: 443 TTASRKQGKVLSYWCFSPSQSMRELVCQGVRTLILTSGTLAPLSSFALEKQIPFPVCLEN 502
Query: 507 PHVIDVDLQVLTSVISTGPDNYPLNASYKTA----------------------------D 538
PH+ID + Q+ ++ GPD L+++Y
Sbjct: 503 PHIIDKN-QLWVGIVPRGPDGVQLSSAYDKRFSEECLSSLGKALSNIARVVPHGLLVFFP 561
Query: 539 GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVR 598
Y +MEK W+ G ++ A KPLFVEP+ ++ F V+ YY ++
Sbjct: 562 SYPVMEKSLEFWQVQGLARKVEALKPLFVEPR--NKGSFSEVIDAYYQQVA--------- 610
Query: 599 KKRVKREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNI 643
+ GA+FLAVCRGK IV G+P+P
Sbjct: 611 -------------------SPASNGATFLAVCRGKASEGLDFSDMNGRGVIVTGLPYPPR 651
Query: 644 NDIQVSLKKKYNDTYRSSKNL----LSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILL 699
D +V LK ++ D R + LSG EWY QA RA+NQAIGR IRHR DYGAI L
Sbjct: 652 MDPRVVLKMQFLDEMRGRSGVGGQCLSGQEWYQQQASRAVNQAIGRVIRHRHDYGAIFLC 711
Query: 700 DERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
D RF RA + W+R +K YD+F ++ + F R
Sbjct: 712 DHRFAYADARAQLPSWVRPYLKVYDNFGHAIRDVAQFLR 750
>gi|426241833|ref|XP_004014789.1| PREDICTED: regulator of telomere elongation helicase 1 [Ovis aries]
Length = 1305
Score = 306 bits (783), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 245/845 (28%), Positives = 363/845 (42%), Gaps = 194/845 (22%)
Query: 22 GIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQN 81
G+ V+FP+QPY Q +M +V+ L + + +LESPTGTGK+L LLCSTLAW+++
Sbjct: 8 GVTVDFPFQPYKCQEEYMSKVLECLQK-----KVNGILESPTGTGKTLCLLCSTLAWREH 62
Query: 82 CKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKK 141
+ I+ LA+ G IPE +P
Sbjct: 63 LRDAVSARRIAERASGELFPDRTLASWGNAIPEGD---VPACYTD--------------- 104
Query: 142 MTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE---CK 198
P I YASRTHSQ++QVISE + T+YR + VL SR+ C + V+ +E+ + C+
Sbjct: 105 -IPKIIYASRTHSQLTQVISELRNTSYRPRVCVLGSREQLCIHPEVKKQESNHMQVHLCR 163
Query: 199 LLLGDRNLGCPQFKNV---HKVRGHPSLQKG---GCHE---------------------- 230
+ R+ C + NV +R S+ +G GC
Sbjct: 164 RKVAGRS--CHFYNNVVYCGALRPSVSMLQGVDCGCLRGSGLAAFYTSLELRCLSEKSLE 221
Query: 231 ------VHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKG 284
+ DIEDLV G + C YY +R++ A ++F PY+Y+++ R A +D+KG
Sbjct: 222 QELATPILDIEDLVRSGTKHKLCPYYLSRNLKQQADIIFMPYNYLLDAKSRRAHSIDLKG 281
Query: 285 AILILDEAHNIEDIARDAGSVDIDE----------DVLLKLQMELEQVCSVNPMIYQPLI 334
++I DEAHN+E + +A S D+ D +L+ Q ++ Q ++P
Sbjct: 282 TVVIFDEAHNVEKMCEEAASFDLTPHDVASGLDVIDQVLEEQTKVAQQAELHP------- 334
Query: 335 EMTQDLVG---------------WIERRKATLAKREFQHFFSCWT--GDKALRELQEANI 377
E + D G + R + + E S T G EA I
Sbjct: 335 EFSADSAGSGLNLELEDLAKLKMILLRLEGAIDAVELPGGNSGVTKPGSYIFELFAEAQI 394
Query: 378 SRQCFPILLECATKAIKEATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQL 437
+ Q +L+ + I+ + +G+ L + + S G V L
Sbjct: 395 TFQTKGCILDSLDQLIQHLAGRAGLFTNTAGLQ--KLADIIQIVFSVDSAEGDPVPMVGL 452
Query: 438 ALQKYI--------KRDSKNPGGNWTHT--------LSLWCLNPAVVFKDVAELSL-SII 480
A Q Y R + W T LS WC +P +++ + ++I
Sbjct: 453 ASQSYKVHIHLDAGHRRTAQRSDVWNTTAARKPGKVLSYWCFSPGHSMRELVRQGVRTLI 512
Query: 481 LTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASY--KTAD 538
LTSGTL+PM SFS E+ + F CLE PHVI Q+ VI GPD L++++ + +D
Sbjct: 513 LTSGTLAPMASFSLEMQIPFPVCLENPHVIS-QHQIWVGVIPKGPDGAQLSSAFDRRFSD 571
Query: 539 --------------------------GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGG 572
Y +MEK WR +L +KPLFVEP+
Sbjct: 572 ECLSSLGKVLSNISRVVPHGLLVFFPSYPVMEKSLEFWRAHDFTRKLEVRKPLFVEPR-- 629
Query: 573 SQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRG 632
S+ F V++ +Y ++ GA FLAVCRG
Sbjct: 630 SKGGFSEVMEAFYARVA----------------------------APESSGAIFLAVCRG 661
Query: 633 K---------------IVVGIPFPNINDIQVSLKKKYNDTYRSSKN----LLSGNEWYCN 673
K IV G+P+P D +V LK ++ D ++ LSG++WY
Sbjct: 662 KASEGLDFADMNGRGVIVTGLPYPPRMDPRVLLKMQFLDEMKAQSGAGGQFLSGHDWYRQ 721
Query: 674 QAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGL 733
QA RA+NQAIGR IRHR DYGA+ L D RF RA + W+R +K YDSF + +
Sbjct: 722 QASRAVNQAIGRVIRHRHDYGAVFLCDHRFAHADTRAQLPSWVRPHVKVYDSFGHVIRDV 781
Query: 734 KSFFR 738
FFR
Sbjct: 782 AQFFR 786
>gi|38707226|gb|AAR27231.1| DEAH helicase isoform 5 [Mus spretus]
Length = 1170
Score = 306 bits (783), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 245/819 (29%), Positives = 369/819 (45%), Gaps = 174/819 (21%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ G+ V+FP+QPY Q +M +V+ L + + +LESPTGTGK+L LLCSTLAWQ
Sbjct: 6 LNGVTVDFPFQPYPCQQEYMTKVLECLQKK-----VNGILESPTGTGKTLCLLCSTLAWQ 60
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVK 139
Q+ L++ ++++ ++ Q T A + +
Sbjct: 61 QH--LRDAISSLKIAE------------------RVQGELFASRTLSSWGSAAAASGDSI 100
Query: 140 KKMT--PTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE- 196
+ T P I YASRTHSQ +QVI E + TAYR + VL SR+ C + V+ +E+ +
Sbjct: 101 ECYTDIPKIIYASRTHSQPTQVIRELRNTAYRPKVCVLGSREQLCIHPEVKKQESNHMQI 160
Query: 197 --CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARS 254
C+ + R+ C + NV L++ + DIEDLV G + C YY +R+
Sbjct: 161 SLCRKKVASRS--CHFYNNVEA----KFLEQDLATPILDIEDLVKNGSKQKMCPYYLSRN 214
Query: 255 MADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDID-EDVLL 313
M A ++F PY+Y+++ R A +D+KG ++I DEAHN+E I ++ S D+ DV
Sbjct: 215 MKQQADIIFMPYNYLLDAKSRKAHSIDLKGTVVIFDEAHNVEKICEESASFDLTPRDVAS 274
Query: 314 KLQMELEQVCSVNPMIYQPLIEMTQDLV------GW------IERRKATLAKREFQHFFS 361
L++ + QV + Q E+ Q+ + G I + K L + E
Sbjct: 275 GLEI-INQVLEEQARVTQQ-GELQQEFIVDTSSSGLNMELEDIAKLKMILLRLEEAIDAV 332
Query: 362 CWTGDK---------ALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVI 412
GD EA I+ Q +LE + I+ HL+G + +
Sbjct: 333 QLPGDDRGVTKPGSYIFELFAEAQITFQTKGCILESLDQIIQ----------HLAGRTGV 382
Query: 413 -----TLEGLFSSLTYFFSRN---GSHVSDYQLALQKYIK---------RDSKNPGGNWT 455
L+ L + FS + GS S L + K R + W+
Sbjct: 383 FTNTAGLQKLMDIIQIVFSVDPPEGSPGSLVGLGISHSYKVHIHPETSHRRAAKRSDAWS 442
Query: 456 HT--------LSLWCLNPAVVFKD-VAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEA 506
T LS WC +P+ ++ V + ++ILTSGTL+P++SF+ E + F CLE
Sbjct: 443 TTASRKQGKVLSYWCFSPSQSMRELVCQGVRTLILTSGTLAPLSSFALEKQIPFPVCLEN 502
Query: 507 PHVIDVDLQVLTSVISTGPDNYPLNASYKTA----------------------------D 538
PH+ID + Q+ ++ GPD L+++Y
Sbjct: 503 PHIIDKN-QLWVGIVPRGPDGVQLSSAYDKRFSEECLSSLGKALSNIARVVPHGLLVFFP 561
Query: 539 GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVR 598
Y +MEK W+ G ++ A KPLFVEP+ ++ F V+ YY ++
Sbjct: 562 SYPVMEKSLEFWQVQGLARKVEALKPLFVEPR--NKGSFSEVIDAYYQQVA--------- 610
Query: 599 KKRVKREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNI 643
+ GA+FLAVCRGK IV G+P+P
Sbjct: 611 -------------------SPASNGATFLAVCRGKASEGLDFSDMNGRGVIVTGLPYPPR 651
Query: 644 NDIQVSLKKKYNDTYRSSKNL----LSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILL 699
D +V LK ++ D R + LSG EWY QA RA+NQAIGR IRHR DYGAI L
Sbjct: 652 MDPRVVLKMQFLDEMRGRSGVGGQCLSGQEWYQQQASRAVNQAIGRVIRHRHDYGAIFLC 711
Query: 700 DERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
D RF RA + W+R +K YD+F ++ + F R
Sbjct: 712 DHRFAYADARAQLPSWVRPYLKVYDNFGHAIRDVAQFLR 750
>gi|410055436|ref|XP_003953846.1| PREDICTED: regulator of telomere elongation helicase 1 [Pan
troglodytes]
Length = 1301
Score = 305 bits (782), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 244/813 (30%), Positives = 368/813 (45%), Gaps = 166/813 (20%)
Query: 22 GIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQN 81
G+ V+FP+QPY Q +M +V+ L + + +LESPTGTGK+L LLC+TLAW+++
Sbjct: 8 GVTVDFPFQPYKCQQEYMTKVLECLQQ-----KVNGILESPTGTGKTLCLLCTTLAWREH 62
Query: 82 CKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKK 141
+ IS K A G P+ S+ + +A
Sbjct: 63 LR-----DGISARKIAERAQ-------GELFPDRALSSWGNAAAAAGDPIACYTD----- 105
Query: 142 MTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE---CK 198
P I YASRTHSQ++QVI+E + T+YR + VL SR+ C + V+ +E+ + C+
Sbjct: 106 -IPKIIYASRTHSQLTQVINELRNTSYRPKVCVLGSREQLCIHPEVKKQESNHLQIHLCR 164
Query: 199 LLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADD 258
+ R+ C + NV + SL++ + DIEDLV G R C YY +R++
Sbjct: 165 KKVASRS--CHFYNNVEEK----SLEQELASPILDIEDLVKSGSKHRVCPYYLSRNLKQQ 218
Query: 259 AQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDE--------- 309
A ++F PY+Y+++ R A +D+KG ++I DEAHN+E + ++ S D+
Sbjct: 219 ADIIFMPYNYLLDAKSRRAHNIDLKGTVVIFDEAHNVEKMCEESASFDLTPHDLASGLDV 278
Query: 310 -DVLLKLQMELEQVCSVNPMIY----QPLIEMTQDLVGWIE----RRKATLAKREFQHFF 360
D +L+ Q + Q +P P + M + + ++ R + + E
Sbjct: 279 IDQVLEEQTKAAQQGEPHPEFSTDSPSPGLNMELEDIAKLKMILLRLEGAIDAVELPGDD 338
Query: 361 SCWT--GDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVI-----T 413
S T G EA I+ Q +L+ + I+ HL+G + +
Sbjct: 339 SGVTKPGSYIFELFAEAQITFQTKGCILDSLDQIIQ----------HLAGRAGVFTNTAG 388
Query: 414 LEGLFSSLTYFFSRN---GSHVSDYQL-ALQKYI--------KRDSKNPGGNWTHT---- 457
L+ L + FS + GS S L ALQ Y R + W+ T
Sbjct: 389 LQKLADIIQIVFSVDPSEGSPGSPAGLGALQSYKVHIHPDAGHRRTAQRSDAWSTTAARK 448
Query: 458 ----LSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDV 512
LS WC +P +++ + S+ILTSGTL+P++SF+ E+ + F CLE PH+ID
Sbjct: 449 RGKVLSYWCFSPGHSMRELLRQGVRSLILTSGTLAPVSSFALEMQIPFPVCLENPHIIDK 508
Query: 513 DLQVLTSVISTGPDNYPLNASYKTA----------------------------DGYKLME 544
Q+ V+ GPD L++++ Y +ME
Sbjct: 509 H-QIWVGVVPRGPDGAQLSSAFDRRFSEECLSSLGKALGNIARVVPYGLLIFFPSYPVME 567
Query: 545 KLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKR 604
K WR ++ A KPLFVEP+ S+ F + YY RV
Sbjct: 568 KSLEFWRARDLARKMEALKPLFVEPR--SKGGFSETISAYY--------------ARVAA 611
Query: 605 EGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVS 649
G+ GA+FLAVCRGK IV G+P+P D +V
Sbjct: 612 PGST--------------GATFLAVCRGKASEGLDFSDTNGRGVIVTGLPYPPRMDPRVV 657
Query: 650 LKKKYNDTYR----SSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQE 705
LK ++ D + + LSG EWY QA RA+NQAIGR IRHR DYGA+ L D RF
Sbjct: 658 LKMQFLDEMKGQGGAGGQFLSGQEWYRQQASRAVNQAIGRVIRHRQDYGAVFLCDHRFAF 717
Query: 706 ERNRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
RA + W+R ++ YD+F + + FFR
Sbjct: 718 ADARAQLPSWVRPHVRVYDNFGHVIRDVAQFFR 750
>gi|38707222|gb|AAR27229.1| DEAH helicase isoform 3 [Mus spretus]
Length = 1164
Score = 305 bits (782), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 245/819 (29%), Positives = 369/819 (45%), Gaps = 174/819 (21%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ G+ V+FP+QPY Q +M +V+ L + + +LESPTGTGK+L LLCSTLAWQ
Sbjct: 6 LNGVTVDFPFQPYPCQQEYMTKVLECLQKK-----VNGILESPTGTGKTLCLLCSTLAWQ 60
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVK 139
Q+ L++ ++++ ++ Q T A + +
Sbjct: 61 QH--LRDAISSLKIAE------------------RVQGELFASRTLSSWGSAAAASGDSI 100
Query: 140 KKMT--PTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE- 196
+ T P I YASRTHSQ +QVI E + TAYR + VL SR+ C + V+ +E+ +
Sbjct: 101 ECYTDIPKIIYASRTHSQPTQVIRELRNTAYRPKVCVLGSREQLCIHPEVKKQESNHMQI 160
Query: 197 --CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARS 254
C+ + R+ C + NV L++ + DIEDLV G + C YY +R+
Sbjct: 161 SLCRKKVASRS--CHFYNNVEA----KFLEQDLATPILDIEDLVKNGSKQKMCPYYLSRN 214
Query: 255 MADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDID-EDVLL 313
M A ++F PY+Y+++ R A +D+KG ++I DEAHN+E I ++ S D+ DV
Sbjct: 215 MKQQADIIFMPYNYLLDAKSRKAHSIDLKGTVVIFDEAHNVEKICEESASFDLTPRDVAS 274
Query: 314 KLQMELEQVCSVNPMIYQPLIEMTQDLV------GW------IERRKATLAKREFQHFFS 361
L++ + QV + Q E+ Q+ + G I + K L + E
Sbjct: 275 GLEI-INQVLEEQARVTQQ-GELQQEFIVDTSSSGLNMELEDIAKLKMILLRLEEAIDAV 332
Query: 362 CWTGDK---------ALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVI 412
GD EA I+ Q +LE + I+ HL+G + +
Sbjct: 333 QLPGDDRGVTKPGSYIFELFAEAQITFQTKGCILESLDQIIQ----------HLAGRTGV 382
Query: 413 -----TLEGLFSSLTYFFSRN---GSHVSDYQLALQKYIK---------RDSKNPGGNWT 455
L+ L + FS + GS S L + K R + W+
Sbjct: 383 FTNTAGLQKLMDIIQIVFSVDPPEGSPGSLVGLGISHSYKVHIHPETSHRRAAKRSDAWS 442
Query: 456 HT--------LSLWCLNPAVVFKD-VAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEA 506
T LS WC +P+ ++ V + ++ILTSGTL+P++SF+ E + F CLE
Sbjct: 443 TTASRKQGKVLSYWCFSPSQSMRELVCQGVRTLILTSGTLAPLSSFALEKQIPFPVCLEN 502
Query: 507 PHVIDVDLQVLTSVISTGPDNYPLNASYKTA----------------------------D 538
PH+ID + Q+ ++ GPD L+++Y
Sbjct: 503 PHIIDKN-QLWVGIVPRGPDGVQLSSAYDKRFSEECLSSLGKALSNIARVVPHGLLVFFP 561
Query: 539 GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVR 598
Y +MEK W+ G ++ A KPLFVEP+ ++ F V+ YY ++
Sbjct: 562 SYPVMEKSLEFWQVQGLARKVEALKPLFVEPR--NKGSFSEVIDAYYQQVA--------- 610
Query: 599 KKRVKREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNI 643
+ GA+FLAVCRGK IV G+P+P
Sbjct: 611 -------------------SPASNGATFLAVCRGKASEGLDFSDMNGRGVIVTGLPYPPR 651
Query: 644 NDIQVSLKKKYNDTYRSSKNL----LSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILL 699
D +V LK ++ D R + LSG EWY QA RA+NQAIGR IRHR DYGAI L
Sbjct: 652 MDPRVVLKMQFLDEMRGRSGVGGQCLSGQEWYQQQASRAVNQAIGRVIRHRHDYGAIFLC 711
Query: 700 DERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
D RF RA + W+R +K YD+F ++ + F R
Sbjct: 712 DHRFAYADARAQLPSWVRPYLKVYDNFGHAIRDVAQFLR 750
>gi|7706541|ref|NP_057518.1| regulator of telomere elongation helicase 1 isoform 1 [Homo
sapiens]
gi|229462743|sp|Q9NZ71.2|RTEL1_HUMAN RecName: Full=Regulator of telomere elongation helicase 1; AltName:
Full=Novel helicase-like
gi|6969265|gb|AAF33687.1|AF217795_1 helicase-like protein NHL [Homo sapiens]
gi|119595644|gb|EAW75238.1| hCG22751, isoform CRA_a [Homo sapiens]
gi|119595645|gb|EAW75239.1| hCG22751, isoform CRA_a [Homo sapiens]
gi|119595647|gb|EAW75241.1| hCG22751, isoform CRA_a [Homo sapiens]
Length = 1219
Score = 305 bits (782), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 244/813 (30%), Positives = 367/813 (45%), Gaps = 166/813 (20%)
Query: 22 GIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQN 81
G+ V+FP+QPY Q +M +V+ L + + +LESPTGTGK+L LLC+TLAW+++
Sbjct: 8 GVTVDFPFQPYKCQQEYMTKVLECLQQ-----KVNGILESPTGTGKTLCLLCTTLAWREH 62
Query: 82 CKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKK 141
+ IS K A G P+ S+ + +A
Sbjct: 63 LR-----DGISARKIAERAQ-------GELFPDRALSSWGNAAAAAGDPIACYTD----- 105
Query: 142 MTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE---CK 198
P I YASRTHSQ++QVI+E + T+YR + VL SR+ C + V+ +E+ + C+
Sbjct: 106 -IPKIIYASRTHSQLTQVINELRNTSYRPKVCVLGSREQLCIHPEVKKQESNHLQIHLCR 164
Query: 199 LLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADD 258
+ R+ C + NV + SL++ + DIEDLV G R C YY +R++
Sbjct: 165 KKVASRS--CHFYNNVEEK----SLEQELASPILDIEDLVKSGSKHRVCPYYLSRNLKQQ 218
Query: 259 AQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDE--------- 309
A ++F PY+Y+++ R A +D+KG ++I DEAHN+E + ++ S D+
Sbjct: 219 ADIIFMPYNYLLDAKSRRAHNIDLKGTVVIFDEAHNVEKMCEESASFDLTPHDLASGLDV 278
Query: 310 -DVLLKLQMELEQVCSVNPMIY----QPLIEMTQDLVGWIE----RRKATLAKREFQHFF 360
D +L+ Q + Q +P P + M + + ++ R + + E
Sbjct: 279 IDQVLEEQTKAAQQGEPHPEFSADSPSPGLNMELEDIAKLKMILLRLEGAIDAVELPGDD 338
Query: 361 SCWT--GDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVI-----T 413
S T G EA I+ Q +L+ + I+ HL+G + +
Sbjct: 339 SGVTKPGSYIFELFAEAQITFQTKGCILDSLDQIIQ----------HLAGRAGVFTNTAG 388
Query: 414 LEGLFSSLTYFFSRN---GSHVSDYQL-ALQKYI--------KRDSKNPGGNWTHT---- 457
L+ L + FS + GS S L ALQ Y R + W+ T
Sbjct: 389 LQKLADIIQIVFSVDPSEGSPGSPAGLGALQSYKVHIHPDAGHRRTAQRSDAWSTTAARK 448
Query: 458 ----LSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDV 512
LS WC +P ++ + S+ILTSGTL+P++SF+ E+ + F CLE PH+ID
Sbjct: 449 RGKVLSYWCFSPGHSMHELVRQGVRSLILTSGTLAPVSSFALEMQIPFPVCLENPHIIDK 508
Query: 513 DLQVLTSVISTGPDNYPLNASYKTA----------------------------DGYKLME 544
Q+ V+ GPD L++++ Y +ME
Sbjct: 509 H-QIWVGVVPRGPDGAQLSSAFDRRFSEECLSSLGKALGNIARVVPYGLLIFFPSYPVME 567
Query: 545 KLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKR 604
K WR ++ A KPLFVEP+ S+ F + YY RV
Sbjct: 568 KSLEFWRARDLARKMEALKPLFVEPR--SKGSFSETISAYY--------------ARVAA 611
Query: 605 EGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVS 649
G+ GA+FLAVCRGK IV G+P+P D +V
Sbjct: 612 PGST--------------GATFLAVCRGKASEGLDFSDTNGRGVIVTGLPYPPRMDPRVV 657
Query: 650 LKKKYNDTYR----SSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQE 705
LK ++ D + + LSG EWY QA RA+NQAIGR IRHR DYGA+ L D RF
Sbjct: 658 LKMQFLDEMKGQGGAGGQFLSGQEWYRQQASRAVNQAIGRVIRHRQDYGAVFLCDHRFAF 717
Query: 706 ERNRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
RA + W+R ++ YD+F + + FFR
Sbjct: 718 ADARAQLPSWVRPHVRVYDNFGHVIRDVAQFFR 750
>gi|197098236|ref|NP_001124929.1| regulator of telomere elongation helicase 1 [Pongo abelii]
gi|75042437|sp|Q5RE34.1|RTEL1_PONAB RecName: Full=Regulator of telomere elongation helicase 1
gi|55726407|emb|CAH89973.1| hypothetical protein [Pongo abelii]
Length = 1302
Score = 305 bits (782), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 244/813 (30%), Positives = 373/813 (45%), Gaps = 165/813 (20%)
Query: 22 GIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQN 81
G+ V+FP+QPY Q +M +V+ L + + +LES TGTGK+L LLC+TLAW+++
Sbjct: 8 GVTVDFPFQPYKCQQEYMTKVLECLQQ-----KVNGILESHTGTGKTLCLLCTTLAWREH 62
Query: 82 CKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKK 141
L++ ++ ++ E V G P+ S+ G A A +
Sbjct: 63 --LRDGIS----ARKIAERVQ------GELFPDRALSSW-----GNAAAAAAGDPIACYT 105
Query: 142 MTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE---CK 198
P I YASRTHSQ++QVI+E + T+YR + VL SR+ C + V+ +E+ + C+
Sbjct: 106 DIPKIIYASRTHSQLTQVINELRNTSYRPKVCVLGSREQLCIHPEVKKQESNHIQIHLCR 165
Query: 199 LLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADD 258
+ R+ C + NV + SL++ + DIEDLV G R C YY +R++
Sbjct: 166 KKVASRS--CHFYNNVEEK----SLEQELASPILDIEDLVKSGSKHRVCPYYLSRNLKQQ 219
Query: 259 AQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDE--------- 309
A ++F PY+Y+++ R A +D+KG ++I DEAHN+E + ++ S D+
Sbjct: 220 ADIIFMPYNYLLDAKSRRAHNIDLKGTVVIFDEAHNVEKMCEESASFDLTPHDLASGLDI 279
Query: 310 -DVLLKLQMELEQVCSVNPMI----YQPLIEMTQDLVGWIE----RRKATLAKREFQHFF 360
D +L+ Q + Q +P P + M + + ++ R + + E
Sbjct: 280 IDQVLEEQTKTAQQGEPHPEFSADSTSPGLNMELEDIAKLKMILLRLEGAIDAVELPGDD 339
Query: 361 SCWT--GDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVI-----T 413
S T G EA I+ Q +L+ + I+ HL+G + +
Sbjct: 340 SGVTKPGSYIFELFAEAQITFQTKVCILDSLDQIIQ----------HLAGRAGVFTNTAG 389
Query: 414 LEGLFSSLTYFFSRNGSHVSDYQL----ALQKYI--------KRDSKNPGGNWTHT---- 457
L+ L + FS + S L ALQ Y R + W+ T
Sbjct: 390 LQKLADIIQIVFSVDPSEGGPGSLAGLGALQSYKVHIHPDAGHRQTAQRSDAWSTTAARK 449
Query: 458 ----LSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDV 512
LS WC +P + +++ + S+ILTSGTL+P++SF+ E+ + F CLE PH+ID
Sbjct: 450 RGKVLSYWCFSPGLSMRELVRQGVRSLILTSGTLAPVSSFALEMQIPFPVCLENPHIIDK 509
Query: 513 DLQVLTSVISTGPDNYPLNASY-----------------KTA-----------DGYKLME 544
Q+ V+ GPD L++++ TA Y +ME
Sbjct: 510 H-QIWVGVVPRGPDGAQLSSAFDRRFSEECLSSLGKALGNTARVVPCGLLIFFPSYPVME 568
Query: 545 KLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKR 604
K WR ++ A KPLFVEP+ S+ F + YY RV
Sbjct: 569 KSLEFWRARDLARKMEALKPLFVEPR--SKGSFSETISAYY--------------ARVAA 612
Query: 605 EGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVS 649
G+ GA+FLAVCRGK IV G+P+P D +V
Sbjct: 613 PGST--------------GATFLAVCRGKASEGLDFSDTNGRGVIVTGLPYPPRMDPRVV 658
Query: 650 LKKKYNDTYR----SSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQE 705
LK ++ D + + LSG EWY QA RA+NQAIGR IRHR DYGA+ L D RF
Sbjct: 659 LKMQFLDEMKGQGGAGGQFLSGQEWYRQQASRAVNQAIGRVIRHRQDYGAVFLCDHRFAF 718
Query: 706 ERNRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
RA + W+R ++ YD+F + + FFR
Sbjct: 719 ADARAQLPSWVRPHVRVYDNFGHVIRDVAQFFR 751
>gi|426392489|ref|XP_004062582.1| PREDICTED: regulator of telomere elongation helicase 1 isoform 1
[Gorilla gorilla gorilla]
Length = 1220
Score = 305 bits (782), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 246/813 (30%), Positives = 370/813 (45%), Gaps = 166/813 (20%)
Query: 22 GIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQN 81
G+ V+FP+QPY Q +M +V+ L + + +LESPTGTGK+L LLC+TLAW+++
Sbjct: 8 GVTVDFPFQPYKCQQEYMTKVLECLQQ-----KVNGILESPTGTGKTLCLLCTTLAWREH 62
Query: 82 CKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKK 141
+ IS K A G P+ S+ G A A +
Sbjct: 63 LR-----DGISARKIAERAQ-------GELFPDRALSSW-----GNAAAAAGDAIACYTD 105
Query: 142 MTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE---CK 198
+ P I YASRTHSQ++QVI+E + T+YR + VL SR+ C + V+ +E+ + C+
Sbjct: 106 I-PKIIYASRTHSQLTQVINELRNTSYRPKVCVLGSREQLCIHPEVKKQESNHIQIHLCR 164
Query: 199 LLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADD 258
+ R+ C + NV + SL++ + DIEDLV G R C YY +R++
Sbjct: 165 KKVASRS--CHFYNNVEEK----SLEQELASPILDIEDLVKSGSKHRVCPYYLSRNLKQQ 218
Query: 259 AQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDE--------- 309
A ++F PY+Y+++ R A +D+KG ++I DEAHN+E + ++ S D+
Sbjct: 219 ADIIFMPYNYLLDAKSRRAHNIDLKGTVVIFDEAHNVEKMCEESASFDLTPHDLASGLDV 278
Query: 310 -DVLLKLQMELEQVCSVNPMIY----QPLIEMTQDLVGWIE----RRKATLAKREFQHFF 360
D +L+ Q + Q +P P + M + + ++ R + + E
Sbjct: 279 IDQVLEEQTKAAQQGERHPEFSADSPSPGLNMELEDIAKLKMILLRLEGAIDAVELPGDD 338
Query: 361 SCWT--GDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVI-----T 413
S T G EA I+ Q +L+ + I+ HL+G + +
Sbjct: 339 SGVTKPGSYIFELFAEAQITFQTKGCILDSLDQIIQ----------HLAGRAGVFTNTAG 388
Query: 414 LEGLFSSLTYFFSRN---GSHVSDYQL-ALQKYI--------KRDSKNPGGNWTHT---- 457
L+ L + FS + GS S L ALQ Y R + W+ T
Sbjct: 389 LQKLADIIQIVFSVDPSEGSPGSPAGLGALQSYKVHIHPDAGHRRTAQRSDAWSTTAARK 448
Query: 458 ----LSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDV 512
LS WC +P +++ + S+ILTSGTL+P++SF+ E+ + F CLE PH+ID
Sbjct: 449 RGKVLSYWCFSPGHSMRELIRQGVRSLILTSGTLAPVSSFALEMQIPFPVCLENPHIIDK 508
Query: 513 DLQVLTSVISTGPDNYPLNASYKTA----------------------------DGYKLME 544
Q+ V+ GPD L++++ Y +ME
Sbjct: 509 H-QIWVGVVPRGPDGAQLSSAFDRRFSEECLSSLGKALGNIARVVPYGLLIFFPSYPVME 567
Query: 545 KLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKR 604
K WR ++ A KPLFVEP+ S+ F + YY RV
Sbjct: 568 KSLEFWRARDLARKMEALKPLFVEPR--SKGSFSETISAYY--------------ARVAA 611
Query: 605 EGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVS 649
G+ GA+FLAVCRGK IV G+P+P D +V
Sbjct: 612 PGST--------------GATFLAVCRGKASEGLDFSDTNGRGVIVTGLPYPPRMDPRVV 657
Query: 650 LKKKYNDTYR----SSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQE 705
LK ++ D + + LSG EWY QA RA+NQAIGR IRHR DYGA+ L D RF
Sbjct: 658 LKMQFLDEMKGQGGAGGQFLSGQEWYRQQASRAVNQAIGRVIRHRQDYGAVFLCDHRFAF 717
Query: 706 ERNRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
RA + W+R ++ YD+F + + FFR
Sbjct: 718 ADARAQLPSWVRPHVRVYDNFGHVIRDVAQFFR 750
>gi|169806602|ref|XP_001828045.1| DNA repair helicase [Enterocytozoon bieneusi H348]
gi|161779173|gb|EDQ31197.1| DNA repair helicase [Enterocytozoon bieneusi H348]
Length = 670
Score = 305 bits (782), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 218/749 (29%), Positives = 349/749 (46%), Gaps = 130/749 (17%)
Query: 15 LNAYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCS 74
+ Y +GG V FPY+PY +Q+ + + T+ ++ C AL+ESPTGTGKSL++LC+
Sbjct: 1 MERYKIGGYTVWFPYKPYPAQI----QTMETMLKSFGSSKC-ALIESPTGTGKSLAILCA 55
Query: 75 TLAWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMN 134
+ + + K D + DP + T N
Sbjct: 56 VMGYLE--------------KKDLNDIIDPKKR---------------RIDNDTENFVNN 86
Query: 135 NKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENID 194
N+ PTI+ SRTH QI Q+I++ +KT Y +++L SRK YC N +R +I+
Sbjct: 87 NQ----IGNPTIYICSRTHKQIDQLINQLRKTKYNPRISILGSRKQYCINSQLRRALDIN 142
Query: 195 EECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARS 254
CK L+ + C V +++ S ++DIE++ N G+ GC Y+A+R
Sbjct: 143 TACKDLIDTKR--CIYKSGVSRLKKQIS-------NIYDIEEIRNSGKKCGGCPYFASRE 193
Query: 255 MADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLK 314
+A++A+++F PY+YII+P IR ++++++K AI+I+DEAHNIED R GS +++ L
Sbjct: 194 IANEAEIIFAPYNYIIDPHIRKSLDIELKNAIVIIDEAHNIEDTCRSVGSFELNSRTLDI 253
Query: 315 LQMEL----EQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAK-REFQHFFSCWTGDKAL 369
EL + + I +++++ + + + K R+F + + G +
Sbjct: 254 WMSELLSSARKAILLEGSIENDFLQLSEFIKKFKTKIDIQFEKSRDFH--YKVFKGTYMI 311
Query: 370 RELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVITLEGLFSSLTYFFSRNG 429
+L+ I++ + L IK D E LS LE L L +
Sbjct: 312 EQLKILGITQ----VSLNLFQSNIKNIRDNEKAKALLSQNLQQGLESLDFVLKNILTNRA 367
Query: 430 SHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPM 489
+Y ++++K S W L+P+++F + SIIL SGTL+P
Sbjct: 368 K--DEYIFCFKQFVKDKS--------FAYCFWLLDPSIIFAGLRNEVRSIILLSGTLTPF 417
Query: 490 NSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTAD----------- 538
+F+SEL V F L APH++ V QV + I G L +Y A+
Sbjct: 418 ATFTSELKVNFENKLIAPHIL-VSNQVFVANIKKGHLKTELTGTYSIANTPEYLSQIATI 476
Query: 539 -------------------GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEI 579
Y ++KL N+ K P+ VEP S E F+
Sbjct: 477 IENIATQIHIYGGTLVFVPSYVFLKKLHNK-----------MKLPVIVEPDTNSTEKFDA 525
Query: 580 VLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFL-AVCRGKIVVGI 638
L Y N + S A+ +G +F R I +GI
Sbjct: 526 TLIEYENKLKDSSHPAIF---------------FCVYRGKASEGINFQDKYARAVIGIGI 570
Query: 639 PFPNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIIL 698
P+P+IND Q++ KK+YN T ++ G+EWY QA RA+NQA+GR +RH D+GA+ L
Sbjct: 571 PYPSINDPQITTKKEYNSTIKN----FGGSEWYMIQAIRAVNQALGRIVRHPGDWGAVFL 626
Query: 699 LDERFQEERNRAHISKWLRKSIKQYDSFD 727
L+ R+Q + R + +W+ +SIK YD+FD
Sbjct: 627 LETRYQTPQIRKQLPQWITRSIKDYDTFD 655
>gi|397477200|ref|XP_003809966.1| PREDICTED: regulator of telomere elongation helicase 1 isoform 2
[Pan paniscus]
Length = 1401
Score = 305 bits (781), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 242/813 (29%), Positives = 366/813 (45%), Gaps = 166/813 (20%)
Query: 22 GIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQN 81
G+ V+FP+QPY Q +M +V+ L + + +LESPTGTGK+L LLC+TLAW+++
Sbjct: 8 GVTVDFPFQPYKCQQEYMTKVLECLQQ-----KVNGILESPTGTGKTLCLLCTTLAWREH 62
Query: 82 CKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKK 141
+ I+ + E D + G + I T+
Sbjct: 63 LRDGISARKIA-ERAQGEVFPDRALSSWGNAAAAAGDPIACYTD---------------- 105
Query: 142 MTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENID---EECK 198
P I YASRTHSQ++QVI+E + T+YR + VL SR+ C + V+ +E+ C+
Sbjct: 106 -IPKIIYASRTHSQLTQVINELRNTSYRPKVCVLGSREQLCIHPEVKKQESNHLQIHSCR 164
Query: 199 LLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADD 258
+ R+ C + NV + SL++ + DIEDLV G R C YY +R++
Sbjct: 165 KKVASRS--CHFYNNVEEK----SLEQELASPILDIEDLVKSGSKHRVCPYYLSRNLKQQ 218
Query: 259 AQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDE--------- 309
A ++F PY+Y+++ R A +D+KG ++I DEAHN+E + ++ S D+
Sbjct: 219 ADIIFMPYNYLLDAKSRRAHNIDLKGTVVIFDEAHNVEKMCEESASFDLTPHDLASGLDV 278
Query: 310 -DVLLKLQMELEQVCSVNPMIY----QPLIEMTQDLVGWIE----RRKATLAKREFQHFF 360
D +L+ Q + Q +P P + M + + ++ R + + E
Sbjct: 279 IDQVLEEQTKAAQQGEPHPEFSTDSPSPGLNMELEDIAKLKMILLRLEGAIDAVELPGDD 338
Query: 361 SCWT--GDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVI-----T 413
S T G EA I+ Q +L+ + I+ HL+G + +
Sbjct: 339 SGVTKPGSYIFELFAEAQITFQTKGCILDSLDQIIQ----------HLAGRAGVFTNTAG 388
Query: 414 LEGLFSSLTYFFSRN---GSHVSDYQL-ALQKYI--------KRDSKNPGGNWTHT---- 457
L+ L + FS + GS S L ALQ Y R + W+ T
Sbjct: 389 LQKLADIIQIVFSVDPSEGSPGSPAGLGALQSYKVHIHPDAGHRRTAQRSDAWSTTAARK 448
Query: 458 ----LSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDV 512
LS WC +P +++ + S+ILTSGTL+P++SF+ E+ + F CLE PH+ID
Sbjct: 449 RGKVLSYWCFSPGHSMRELLRQGVRSLILTSGTLAPVSSFALEMQIPFPVCLENPHIIDK 508
Query: 513 DLQVLTSVISTGPDNYPLNASYKTA----------------------------DGYKLME 544
Q+ V+ GPD L++++ Y +ME
Sbjct: 509 H-QIWVGVVPRGPDGAQLSSAFDRRFSEECLSSLGKALGNIARVVPYGLLIFFPSYPVME 567
Query: 545 KLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKR 604
K WR ++ A KPLFVEP+ S+ F + YY RV
Sbjct: 568 KSLEFWRARDLARKMEALKPLFVEPR--SKGGFSETISAYY--------------ARVAA 611
Query: 605 EGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVS 649
G+ GA+FLAVCRGK IV G+P+P D +V
Sbjct: 612 PGST--------------GATFLAVCRGKASEGLDFSDTNGRGVIVTGLPYPPRMDPRVV 657
Query: 650 LKKKYNDTYR----SSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQE 705
LK ++ D + + LSG EWY QA RA+NQAIGR IRHR DYGA+ L D RF
Sbjct: 658 LKMQFLDEMKGQGGAGGQFLSGQEWYRQQASRAVNQAIGRVIRHRQDYGAVFLCDHRFAF 717
Query: 706 ERNRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
RA + W+R ++ YD+F + + FFR
Sbjct: 718 ADARAQLPSWVRPHVRVYDNFGHVIRDVAQFFR 750
>gi|119595646|gb|EAW75240.1| hCG22751, isoform CRA_b [Homo sapiens]
gi|119595651|gb|EAW75245.1| hCG22751, isoform CRA_b [Homo sapiens]
Length = 1300
Score = 305 bits (781), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 244/813 (30%), Positives = 367/813 (45%), Gaps = 166/813 (20%)
Query: 22 GIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQN 81
G+ V+FP+QPY Q +M +V+ L + + +LESPTGTGK+L LLC+TLAW+++
Sbjct: 8 GVTVDFPFQPYKCQQEYMTKVLECLQQ-----KVNGILESPTGTGKTLCLLCTTLAWREH 62
Query: 82 CKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKK 141
+ IS K A G P+ S+ + +A
Sbjct: 63 LR-----DGISARKIAERAQ-------GELFPDRALSSWGNAAAAAGDPIACYTD----- 105
Query: 142 MTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE---CK 198
P I YASRTHSQ++QVI+E + T+YR + VL SR+ C + V+ +E+ + C+
Sbjct: 106 -IPKIIYASRTHSQLTQVINELRNTSYRPKVCVLGSREQLCIHPEVKKQESNHLQIHLCR 164
Query: 199 LLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADD 258
+ R+ C + NV + SL++ + DIEDLV G R C YY +R++
Sbjct: 165 KKVASRS--CHFYNNVEEK----SLEQELASPILDIEDLVKSGSKHRVCPYYLSRNLKQQ 218
Query: 259 AQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDE--------- 309
A ++F PY+Y+++ R A +D+KG ++I DEAHN+E + ++ S D+
Sbjct: 219 ADIIFMPYNYLLDAKSRRAHNIDLKGTVVIFDEAHNVEKMCEESASFDLTPHDLASGLDV 278
Query: 310 -DVLLKLQMELEQVCSVNPMIY----QPLIEMTQDLVGWIE----RRKATLAKREFQHFF 360
D +L+ Q + Q +P P + M + + ++ R + + E
Sbjct: 279 IDQVLEEQTKAAQQGEPHPEFSADSPSPGLNMELEDIAKLKMILLRLEGAIDAVELPGDD 338
Query: 361 SCWT--GDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVI-----T 413
S T G EA I+ Q +L+ + I+ HL+G + +
Sbjct: 339 SGVTKPGSYIFELFAEAQITFQTKGCILDSLDQIIQ----------HLAGRAGVFTNTAG 388
Query: 414 LEGLFSSLTYFFSRN---GSHVSDYQL-ALQKYI--------KRDSKNPGGNWTHT---- 457
L+ L + FS + GS S L ALQ Y R + W+ T
Sbjct: 389 LQKLADIIQIVFSVDPSEGSPGSPAGLGALQSYKVHIHPDAGHRRTAQRSDAWSTTAARK 448
Query: 458 ----LSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDV 512
LS WC +P ++ + S+ILTSGTL+P++SF+ E+ + F CLE PH+ID
Sbjct: 449 RGKVLSYWCFSPGHSMHELVRQGVRSLILTSGTLAPVSSFALEMQIPFPVCLENPHIIDK 508
Query: 513 DLQVLTSVISTGPDNYPLNASYKTA----------------------------DGYKLME 544
Q+ V+ GPD L++++ Y +ME
Sbjct: 509 H-QIWVGVVPRGPDGAQLSSAFDRRFSEECLSSLGKALGNIARVVPYGLLIFFPSYPVME 567
Query: 545 KLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKR 604
K WR ++ A KPLFVEP+ S+ F + YY RV
Sbjct: 568 KSLEFWRARDLARKMEALKPLFVEPR--SKGSFSETISAYY--------------ARVAA 611
Query: 605 EGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVS 649
G+ GA+FLAVCRGK IV G+P+P D +V
Sbjct: 612 PGST--------------GATFLAVCRGKASEGLDFSDTNGRGVIVTGLPYPPRMDPRVV 657
Query: 650 LKKKYNDTYR----SSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQE 705
LK ++ D + + LSG EWY QA RA+NQAIGR IRHR DYGA+ L D RF
Sbjct: 658 LKMQFLDEMKGQGGAGGQFLSGQEWYRQQASRAVNQAIGRVIRHRQDYGAVFLCDHRFAF 717
Query: 706 ERNRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
RA + W+R ++ YD+F + + FFR
Sbjct: 718 ADARAQLPSWVRPHVRVYDNFGHVIRDVAQFFR 750
>gi|426392493|ref|XP_004062584.1| PREDICTED: regulator of telomere elongation helicase 1 isoform 3
[Gorilla gorilla gorilla]
Length = 1301
Score = 305 bits (781), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 246/813 (30%), Positives = 370/813 (45%), Gaps = 166/813 (20%)
Query: 22 GIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQN 81
G+ V+FP+QPY Q +M +V+ L + + +LESPTGTGK+L LLC+TLAW+++
Sbjct: 8 GVTVDFPFQPYKCQQEYMTKVLECLQQ-----KVNGILESPTGTGKTLCLLCTTLAWREH 62
Query: 82 CKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKK 141
+ IS K A G P+ S+ G A A +
Sbjct: 63 LR-----DGISARKIAERAQ-------GELFPDRALSSW-----GNAAAAAGDAIACYTD 105
Query: 142 MTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE---CK 198
+ P I YASRTHSQ++QVI+E + T+YR + VL SR+ C + V+ +E+ + C+
Sbjct: 106 I-PKIIYASRTHSQLTQVINELRNTSYRPKVCVLGSREQLCIHPEVKKQESNHIQIHLCR 164
Query: 199 LLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADD 258
+ R+ C + NV + SL++ + DIEDLV G R C YY +R++
Sbjct: 165 KKVASRS--CHFYNNVEEK----SLEQELASPILDIEDLVKSGSKHRVCPYYLSRNLKQQ 218
Query: 259 AQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDE--------- 309
A ++F PY+Y+++ R A +D+KG ++I DEAHN+E + ++ S D+
Sbjct: 219 ADIIFMPYNYLLDAKSRRAHNIDLKGTVVIFDEAHNVEKMCEESASFDLTPHDLASGLDV 278
Query: 310 -DVLLKLQMELEQVCSVNPMIY----QPLIEMTQDLVGWIE----RRKATLAKREFQHFF 360
D +L+ Q + Q +P P + M + + ++ R + + E
Sbjct: 279 IDQVLEEQTKAAQQGERHPEFSADSPSPGLNMELEDIAKLKMILLRLEGAIDAVELPGDD 338
Query: 361 SCWT--GDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVI-----T 413
S T G EA I+ Q +L+ + I+ HL+G + +
Sbjct: 339 SGVTKPGSYIFELFAEAQITFQTKGCILDSLDQIIQ----------HLAGRAGVFTNTAG 388
Query: 414 LEGLFSSLTYFFSRN---GSHVSDYQL-ALQKYI--------KRDSKNPGGNWTHT---- 457
L+ L + FS + GS S L ALQ Y R + W+ T
Sbjct: 389 LQKLADIIQIVFSVDPSEGSPGSPAGLGALQSYKVHIHPDAGHRRTAQRSDAWSTTAARK 448
Query: 458 ----LSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDV 512
LS WC +P +++ + S+ILTSGTL+P++SF+ E+ + F CLE PH+ID
Sbjct: 449 RGKVLSYWCFSPGHSMRELIRQGVRSLILTSGTLAPVSSFALEMQIPFPVCLENPHIIDK 508
Query: 513 DLQVLTSVISTGPDNYPLNASYKTA----------------------------DGYKLME 544
Q+ V+ GPD L++++ Y +ME
Sbjct: 509 H-QIWVGVVPRGPDGAQLSSAFDRRFSEECLSSLGKALGNIARVVPYGLLIFFPSYPVME 567
Query: 545 KLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKR 604
K WR ++ A KPLFVEP+ S+ F + YY RV
Sbjct: 568 KSLEFWRARDLARKMEALKPLFVEPR--SKGSFSETISAYY--------------ARVAA 611
Query: 605 EGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVS 649
G+ GA+FLAVCRGK IV G+P+P D +V
Sbjct: 612 PGST--------------GATFLAVCRGKASEGLDFSDTNGRGVIVTGLPYPPRMDPRVV 657
Query: 650 LKKKYNDTYR----SSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQE 705
LK ++ D + + LSG EWY QA RA+NQAIGR IRHR DYGA+ L D RF
Sbjct: 658 LKMQFLDEMKGQGGAGGQFLSGQEWYRQQASRAVNQAIGRVIRHRQDYGAVFLCDHRFAF 717
Query: 706 ERNRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
RA + W+R ++ YD+F + + FFR
Sbjct: 718 ADARAQLPSWVRPHVRVYDNFGHVIRDVAQFFR 750
>gi|119595649|gb|EAW75243.1| hCG22751, isoform CRA_d [Homo sapiens]
Length = 1023
Score = 305 bits (780), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 244/813 (30%), Positives = 367/813 (45%), Gaps = 166/813 (20%)
Query: 22 GIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQN 81
G+ V+FP+QPY Q +M +V+ L + + +LESPTGTGK+L LLC+TLAW+++
Sbjct: 8 GVTVDFPFQPYKCQQEYMTKVLECLQQK-----VNGILESPTGTGKTLCLLCTTLAWREH 62
Query: 82 CKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKK 141
+ IS K A G P+ S+ + +A
Sbjct: 63 LR-----DGISARKIAERA-------QGELFPDRALSSWGNAAAAAGDPIACYTD----- 105
Query: 142 MTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE---CK 198
P I YASRTHSQ++QVI+E + T+YR + VL SR+ C + V+ +E+ + C+
Sbjct: 106 -IPKIIYASRTHSQLTQVINELRNTSYRPKVCVLGSREQLCIHPEVKKQESNHLQIHLCR 164
Query: 199 LLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADD 258
+ R+ C + NV + SL++ + DIEDLV G R C YY +R++
Sbjct: 165 KKVASRS--CHFYNNVEE----KSLEQELASPILDIEDLVKSGSKHRVCPYYLSRNLKQQ 218
Query: 259 AQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDE--------- 309
A ++F PY+Y+++ R A +D+KG ++I DEAHN+E + ++ S D+
Sbjct: 219 ADIIFMPYNYLLDAKSRRAHNIDLKGTVVIFDEAHNVEKMCEESASFDLTPHDLASGLDV 278
Query: 310 -DVLLKLQMELEQVCSVNPMIY----QPLIEMTQDLVGWIE----RRKATLAKREFQHFF 360
D +L+ Q + Q +P P + M + + ++ R + + E
Sbjct: 279 IDQVLEEQTKAAQQGEPHPEFSADSPSPGLNMELEDIAKLKMILLRLEGAIDAVELPGDD 338
Query: 361 SCWT--GDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVI-----T 413
S T G EA I+ Q +L+ + I+ HL+G + +
Sbjct: 339 SGVTKPGSYIFELFAEAQITFQTKGCILDSLDQIIQ----------HLAGRAGVFTNTAG 388
Query: 414 LEGLFSSLTYFFSRN---GSHVSDYQL-ALQKYI--------KRDSKNPGGNWTHT---- 457
L+ L + FS + GS S L ALQ Y R + W+ T
Sbjct: 389 LQKLADIIQIVFSVDPSEGSPGSPAGLGALQSYKVHIHPDAGHRRTAQRSDAWSTTAARK 448
Query: 458 ----LSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDV 512
LS WC +P ++ + S+ILTSGTL+P++SF+ E+ + F CLE PH+ID
Sbjct: 449 RGKVLSYWCFSPGHSMHELVRQGVRSLILTSGTLAPVSSFALEMQIPFPVCLENPHIIDK 508
Query: 513 DLQVLTSVISTGPDNYPLNASYKTA----------------------------DGYKLME 544
Q+ V+ GPD L++++ Y +ME
Sbjct: 509 H-QIWVGVVPRGPDGAQLSSAFDRRFSEECLSSLGKALGNIARVVPYGLLIFFPSYPVME 567
Query: 545 KLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKR 604
K WR ++ A KPLFVEP+ S+ F + YY RV
Sbjct: 568 KSLEFWRARDLARKMEALKPLFVEPR--SKGSFSETISAYY--------------ARVAA 611
Query: 605 EGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVS 649
G+ GA+FLAVCRGK IV G+P+P D +V
Sbjct: 612 PGST--------------GATFLAVCRGKASEGLDFSDTNGRGVIVTGLPYPPRMDPRVV 657
Query: 650 LKKKYNDTYR----SSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQE 705
LK ++ D + + LSG EWY QA RA+NQAIGR IRHR DYGA+ L D RF
Sbjct: 658 LKMQFLDEMKGQGGAGGQFLSGQEWYRQQASRAVNQAIGRVIRHRQDYGAVFLCDHRFAF 717
Query: 706 ERNRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
RA + W+R ++ YD+F + + FFR
Sbjct: 718 ADARAQLPSWVRPHVRVYDNFGHVIRDVAQFFR 750
>gi|7012929|gb|AAF35243.1| helicase-like protein NHL [Homo sapiens]
Length = 1400
Score = 304 bits (779), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 244/813 (30%), Positives = 367/813 (45%), Gaps = 166/813 (20%)
Query: 22 GIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQN 81
G+ V+FP+QPY Q +M +V+ L + + +LESPTGTGK+L LLC+TLAW+++
Sbjct: 8 GVTVDFPFQPYKCQQEYMTKVLECLQQ-----KVNGILESPTGTGKTLCLLCTTLAWREH 62
Query: 82 CKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKK 141
+ IS K A G P+ S+ + +A
Sbjct: 63 LR-----DGISARKIAERAQ-------GELFPDRALSSWGNAAAAAGDPIACYTD----- 105
Query: 142 MTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE---CK 198
P I YASRTHSQ++QVI+E + T+YR + VL SR+ C + V+ +E+ + C+
Sbjct: 106 -IPKIIYASRTHSQLTQVINELRNTSYRPKVCVLGSREQLCIHPEVKKQESNHLQIHLCR 164
Query: 199 LLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADD 258
+ R+ C + NV + SL++ + DIEDLV G R C YY +R++
Sbjct: 165 KKVASRS--CHFYNNVEEK----SLEQELASPILDIEDLVKSGSKHRVCPYYLSRNLKQQ 218
Query: 259 AQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDE--------- 309
A ++F PY+Y+++ R A +D+KG ++I DEAHN+E + ++ S D+
Sbjct: 219 ADIIFMPYNYLLDAKSRRAHNIDLKGTVVIFDEAHNVEKMCEESASFDLTPHDLASGLDV 278
Query: 310 -DVLLKLQMELEQVCSVNPMIY----QPLIEMTQDLVGWIE----RRKATLAKREFQHFF 360
D +L+ Q + Q +P P + M + + ++ R + + E
Sbjct: 279 IDQVLEEQTKAAQQGEPHPEFSADSPSPGLNMELEDIAKLKMILLRLEGAIDAVELPGDD 338
Query: 361 SCWT--GDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVI-----T 413
S T G EA I+ Q +L+ + I+ HL+G + +
Sbjct: 339 SGVTKPGSYIFELFAEAQITFQTKGCILDSLDQIIQ----------HLAGRAGVFTNTAG 388
Query: 414 LEGLFSSLTYFFSRN---GSHVSDYQL-ALQKYI--------KRDSKNPGGNWTHT---- 457
L+ L + FS + GS S L ALQ Y R + W+ T
Sbjct: 389 LQKLADIIQIVFSVDPSEGSPGSPAGLGALQSYKVHIHPDAGHRRTAQRSDAWSTTAARK 448
Query: 458 ----LSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDV 512
LS WC +P ++ + S+ILTSGTL+P++SF+ E+ + F CLE PH+ID
Sbjct: 449 RGKVLSYWCFSPGHSMHELVRQGVRSLILTSGTLAPVSSFALEMQIPFPVCLENPHIIDK 508
Query: 513 DLQVLTSVISTGPDNYPLNASYKTA----------------------------DGYKLME 544
Q+ V+ GPD L++++ Y +ME
Sbjct: 509 H-QIWVGVVPRGPDGAQLSSAFDRRFSEECLSSLGKALGNIARVVPYGLLIFFPSYPVME 567
Query: 545 KLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKR 604
K WR ++ A KPLFVEP+ S+ F + YY RV
Sbjct: 568 KSLEFWRARDLARKMEALKPLFVEPR--SKGSFSETISAYY--------------ARVAA 611
Query: 605 EGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVS 649
G+ GA+FLAVCRGK IV G+P+P D +V
Sbjct: 612 PGST--------------GATFLAVCRGKASEGLDFSDTNGRGVIVTGLPYPPRMDPRVV 657
Query: 650 LKKKYNDTYR----SSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQE 705
LK ++ D + + LSG EWY QA RA+NQAIGR IRHR DYGA+ L D RF
Sbjct: 658 LKMQFLDEMKGQGGAGGQFLSGQEWYRQQASRAVNQAIGRVIRHRQDYGAVFLCDHRFAF 717
Query: 706 ERNRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
RA + W+R ++ YD+F + + FFR
Sbjct: 718 ADARAQLPSWVRPHVRVYDNFGHVIRDVAQFFR 750
>gi|119595650|gb|EAW75244.1| hCG22751, isoform CRA_e [Homo sapiens]
Length = 1400
Score = 304 bits (779), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 244/813 (30%), Positives = 367/813 (45%), Gaps = 166/813 (20%)
Query: 22 GIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQN 81
G+ V+FP+QPY Q +M +V+ L + + +LESPTGTGK+L LLC+TLAW+++
Sbjct: 8 GVTVDFPFQPYKCQQEYMTKVLECLQQ-----KVNGILESPTGTGKTLCLLCTTLAWREH 62
Query: 82 CKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKK 141
+ IS K A G P+ S+ + +A
Sbjct: 63 LR-----DGISARKIAERAQ-------GELFPDRALSSWGNAAAAAGDPIACYTD----- 105
Query: 142 MTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE---CK 198
P I YASRTHSQ++QVI+E + T+YR + VL SR+ C + V+ +E+ + C+
Sbjct: 106 -IPKIIYASRTHSQLTQVINELRNTSYRPKVCVLGSREQLCIHPEVKKQESNHLQIHLCR 164
Query: 199 LLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADD 258
+ R+ C + NV + SL++ + DIEDLV G R C YY +R++
Sbjct: 165 KKVASRS--CHFYNNVEEK----SLEQELASPILDIEDLVKSGSKHRVCPYYLSRNLKQQ 218
Query: 259 AQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDE--------- 309
A ++F PY+Y+++ R A +D+KG ++I DEAHN+E + ++ S D+
Sbjct: 219 ADIIFMPYNYLLDAKSRRAHNIDLKGTVVIFDEAHNVEKMCEESASFDLTPHDLASGLDV 278
Query: 310 -DVLLKLQMELEQVCSVNPMIY----QPLIEMTQDLVGWIE----RRKATLAKREFQHFF 360
D +L+ Q + Q +P P + M + + ++ R + + E
Sbjct: 279 IDQVLEEQTKAAQQGEPHPEFSADSPSPGLNMELEDIAKLKMILLRLEGAIDAVELPGDD 338
Query: 361 SCWT--GDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVI-----T 413
S T G EA I+ Q +L+ + I+ HL+G + +
Sbjct: 339 SGVTKPGSYIFELFAEAQITFQTKGCILDSLDQIIQ----------HLAGRAGVFTNTAG 388
Query: 414 LEGLFSSLTYFFSRN---GSHVSDYQL-ALQKYI--------KRDSKNPGGNWTHT---- 457
L+ L + FS + GS S L ALQ Y R + W+ T
Sbjct: 389 LQKLADIIQIVFSVDPSEGSPGSPAGLGALQSYKVHIHPDAGHRRTAQRSDAWSTTAARK 448
Query: 458 ----LSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDV 512
LS WC +P ++ + S+ILTSGTL+P++SF+ E+ + F CLE PH+ID
Sbjct: 449 RGKVLSYWCFSPGHSMHELVRQGVRSLILTSGTLAPVSSFALEMQIPFPVCLENPHIIDK 508
Query: 513 DLQVLTSVISTGPDNYPLNASYKTA----------------------------DGYKLME 544
Q+ V+ GPD L++++ Y +ME
Sbjct: 509 H-QIWVGVVPRGPDGAQLSSAFDRRFSEECLSSLGKALGNIARVVPYGLLIFFPSYPVME 567
Query: 545 KLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKR 604
K WR ++ A KPLFVEP+ S+ F + YY RV
Sbjct: 568 KSLEFWRARDLARKMEALKPLFVEPR--SKGSFSETISAYY--------------ARVAA 611
Query: 605 EGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVS 649
G+ GA+FLAVCRGK IV G+P+P D +V
Sbjct: 612 PGST--------------GATFLAVCRGKASEGLDFSDTNGRGVIVTGLPYPPRMDPRVV 657
Query: 650 LKKKYNDTYR----SSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQE 705
LK ++ D + + LSG EWY QA RA+NQAIGR IRHR DYGA+ L D RF
Sbjct: 658 LKMQFLDEMKGQGGAGGQFLSGQEWYRQQASRAVNQAIGRVIRHRQDYGAVFLCDHRFAF 717
Query: 706 ERNRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
RA + W+R ++ YD+F + + FFR
Sbjct: 718 ADARAQLPSWVRPHVRVYDNFGHVIRDVAQFFR 750
>gi|374674404|dbj|BAA83040.3| KIAA1088 protein, partial [Homo sapiens]
Length = 1400
Score = 304 bits (779), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 244/813 (30%), Positives = 367/813 (45%), Gaps = 166/813 (20%)
Query: 22 GIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQN 81
G+ V+FP+QPY Q +M +V+ L + + +LESPTGTGK+L LLC+TLAW+++
Sbjct: 8 GVTVDFPFQPYKCQQEYMTKVLECLQQK-----VNGILESPTGTGKTLCLLCTTLAWREH 62
Query: 82 CKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKK 141
+ IS K A G P+ S+ + +A
Sbjct: 63 LR-----DGISARKIAERAQ-------GELFPDRALSSWGNAAAAAGDPIACYTD----- 105
Query: 142 MTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE---CK 198
P I YASRTHSQ++QVI+E + T+YR + VL SR+ C + V+ +E+ + C+
Sbjct: 106 -IPKIIYASRTHSQLTQVINELRNTSYRPKVCVLGSREQLCIHPEVKKQESNHLQIHLCR 164
Query: 199 LLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADD 258
+ R+ C + NV + SL++ + DIEDLV G R C YY +R++
Sbjct: 165 KKVASRS--CHFYNNVEEK----SLEQELASPILDIEDLVKSGSKHRVCPYYLSRNLKQQ 218
Query: 259 AQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDE--------- 309
A ++F PY+Y+++ R A +D+KG ++I DEAHN+E + ++ S D+
Sbjct: 219 ADIIFMPYNYLLDAKSRRAHNIDLKGTVVIFDEAHNVEKMCEESASFDLTPHDLASGLDV 278
Query: 310 -DVLLKLQMELEQVCSVNPMIY----QPLIEMTQDLVGWIE----RRKATLAKREFQHFF 360
D +L+ Q + Q +P P + M + + ++ R + + E
Sbjct: 279 IDQVLEEQTKAAQQGEPHPEFSADSPSPGLNMELEDIAKLKMILLRLEGAIDAVELPGDD 338
Query: 361 SCWT--GDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVI-----T 413
S T G EA I+ Q +L+ + I+ HL+G + +
Sbjct: 339 SGVTKPGSYIFELFAEAQITFQTKGCILDSLDQIIQ----------HLAGRAGVFTNTAG 388
Query: 414 LEGLFSSLTYFFSRN---GSHVSDYQL-ALQKYI--------KRDSKNPGGNWTHT---- 457
L+ L + FS + GS S L ALQ Y R + W+ T
Sbjct: 389 LQKLADIIQIVFSVDPSEGSPGSPAGLGALQSYKVHIHPDAGHRRTAQRSDAWSTTAARK 448
Query: 458 ----LSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDV 512
LS WC +P ++ + S+ILTSGTL+P++SF+ E+ + F CLE PH+ID
Sbjct: 449 RGKVLSYWCFSPGHSMHELVRQGVRSLILTSGTLAPVSSFALEMQIPFPVCLENPHIIDK 508
Query: 513 DLQVLTSVISTGPDNYPLNASYKTA----------------------------DGYKLME 544
Q+ V+ GPD L++++ Y +ME
Sbjct: 509 H-QIWVGVVPRGPDGAQLSSAFDRRFSEECLSSLGKALGNIARVVPYGLLIFFPSYPVME 567
Query: 545 KLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKR 604
K WR ++ A KPLFVEP+ S+ F + YY RV
Sbjct: 568 KSLEFWRARDLARKMEALKPLFVEPR--SKGSFSETISAYY--------------ARVAA 611
Query: 605 EGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVS 649
G+ GA+FLAVCRGK IV G+P+P D +V
Sbjct: 612 PGST--------------GATFLAVCRGKASEGLDFSDTNGRGVIVTGLPYPPRMDPRVV 657
Query: 650 LKKKYNDTYR----SSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQE 705
LK ++ D + + LSG EWY QA RA+NQAIGR IRHR DYGA+ L D RF
Sbjct: 658 LKMQFLDEMKGQGGAGGQFLSGQEWYRQQASRAVNQAIGRVIRHRQDYGAVFLCDHRFAF 717
Query: 706 ERNRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
RA + W+R ++ YD+F + + FFR
Sbjct: 718 ADARAQLPSWVRPHVRVYDNFGHVIRDVAQFFR 750
>gi|194387848|dbj|BAG61337.1| unnamed protein product [Homo sapiens]
Length = 1004
Score = 303 bits (777), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 243/813 (29%), Positives = 367/813 (45%), Gaps = 166/813 (20%)
Query: 22 GIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQN 81
G+ V+FP+QPY Q +M +V+ L + + +LESPTGTG++L LLC+TLAW+++
Sbjct: 8 GVTVDFPFQPYKCQQEYMTKVLECLQQK-----VNGILESPTGTGRTLCLLCTTLAWREH 62
Query: 82 CKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKK 141
+ IS K A G P+ S+ + +A
Sbjct: 63 LR-----DGISARKIAERA-------QGELFPDRALSSWGNAAAAAGDPIACYTD----- 105
Query: 142 MTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE---CK 198
P I YASRTHSQ++QVI+E + T+YR + VL SR+ C + V+ +E+ + C+
Sbjct: 106 -IPKIIYASRTHSQLTQVINELRNTSYRPKVCVLGSREQLCIHPEVKKQESNHLQIHLCR 164
Query: 199 LLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADD 258
+ R+ C + NV + SL++ + DIEDLV G R C YY +R++
Sbjct: 165 KKVASRS--CHFYNNVEE----KSLEQELASPILDIEDLVKSGSKHRVCPYYLSRNLKQQ 218
Query: 259 AQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDE--------- 309
A ++F PY+Y+++ R A +D+KG ++I DEAHN+E + ++ S D+
Sbjct: 219 ADIIFMPYNYLLDAKSRRAHNIDLKGTVVIFDEAHNVEKMCEESASFDLTPHDLASGLDV 278
Query: 310 -DVLLKLQMELEQVCSVNPMIY----QPLIEMTQDLVGWIE----RRKATLAKREFQHFF 360
D +L+ Q + Q +P P + M + + ++ R + + E
Sbjct: 279 IDQVLEEQTKAAQQGEPHPEFSADSPSPGLNMELEDIAKLKMILLRLEGAIDAVELPGDD 338
Query: 361 SCWT--GDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVI-----T 413
S T G EA I+ Q +L+ + I+ HL+G + +
Sbjct: 339 SGVTKPGSYIFELFAEAQITFQTKGCILDSLDQIIQ----------HLAGRAGVFTNTAG 388
Query: 414 LEGLFSSLTYFFSRN---GSHVSDYQL-ALQKYI--------KRDSKNPGGNWTHT---- 457
L+ L + FS + GS S L ALQ Y R + W+ T
Sbjct: 389 LQKLADIIQIVFSVDPSEGSPGSPAGLGALQSYKVHIHPDAGHRRTAQRSDAWSTTAARK 448
Query: 458 ----LSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDV 512
LS WC +P ++ + S+ILTSGTL+P++SF+ E+ + F CLE PH+ID
Sbjct: 449 RGKVLSYWCFSPGHSMHELVRQGVRSLILTSGTLAPVSSFALEMQIPFPVCLENPHIIDK 508
Query: 513 DLQVLTSVISTGPDNYPLNASYKTA----------------------------DGYKLME 544
Q+ V+ GPD L++++ Y +ME
Sbjct: 509 H-QIWVGVVPRGPDGAQLSSAFDRRFSEECLSSLGKALGNIARVVPYGLLIFFPSYPVME 567
Query: 545 KLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKR 604
K WR ++ A KPLFVEP+ S+ F + YY RV
Sbjct: 568 KSLEFWRARDLARKMEALKPLFVEPR--SKGSFSETISAYY--------------ARVAA 611
Query: 605 EGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVS 649
G+ GA+FLAVCRGK IV G+P+P D +V
Sbjct: 612 PGST--------------GATFLAVCRGKASEGLDFSDTNGRGVIVTGLPYPPRMDPRVV 657
Query: 650 LKKKYNDTYR----SSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQE 705
LK ++ D + + LSG EWY QA RA+NQAIGR IRHR DYGA+ L D RF
Sbjct: 658 LKMQFLDEMKGQGGAGGQFLSGQEWYRQQASRAVNQAIGRVIRHRQDYGAVFLCDHRFAF 717
Query: 706 ERNRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
RA + W+R ++ YD+F + + FFR
Sbjct: 718 ADARAQLPSWVRPHVRVYDNFGHVIRDVAQFFR 750
>gi|403282703|ref|XP_003932780.1| PREDICTED: LOW QUALITY PROTEIN: regulator of telomere elongation
helicase 1 [Saimiri boliviensis boliviensis]
Length = 1604
Score = 303 bits (776), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 243/832 (29%), Positives = 368/832 (44%), Gaps = 204/832 (24%)
Query: 22 GIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQN 81
G+ V+FP++PY Q +M +V+ L + + +LESPTGTGK+L LLC+TLAW+++
Sbjct: 8 GVTVDFPFEPYKCQQEYMAKVLECLQK-----KVNGILESPTGTGKTLCLLCTTLAWREH 62
Query: 82 CKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKK 141
+ IS K + + L G P+ S+ +A A +
Sbjct: 63 LR-----DTISARK-----IAERLQ--GELFPDRALSSW------GSAAAADGDPTACYT 104
Query: 142 MTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE---CK 198
P I YASRTHSQ++QVISE + T+YR + VL SR+ C + V+ +E+ + C+
Sbjct: 105 DIPKIIYASRTHSQLTQVISELRNTSYRPKVCVLGSREQLCIHPEVKKQESNHMQIHLCR 164
Query: 199 LLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADD 258
+ R+ C + NV + SL++ + DIEDLV G R C YY +R++
Sbjct: 165 KKVASRS--CHFYNNVEEK----SLEQELASPILDIEDLVKSGSRHRVCPYYLSRNLKQQ 218
Query: 259 AQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGS-----------VDI 307
A ++F PY+Y+++ R A +D+KG ++I DEAHN+E + ++ S +D+
Sbjct: 219 ADIIFMPYNYLLDAKSRRAHSIDLKGTVVIFDEAHNVEKMCEESASFDLTPHDLASGLDV 278
Query: 308 DEDVLLK----------------------LQMELEQVCSVNPMIYQPL------IEMTQD 339
+ VL + L MELE + + MI L IE+ D
Sbjct: 279 IDRVLEEQTKAAQQGEPHPGFSADTPSSGLNMELEDIAKLK-MILLRLEGAIDAIELPGD 337
Query: 340 LVGWIERRKATLAKREFQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDT 399
G + G EA ++ Q +L+ + I+
Sbjct: 338 SSGVTK------------------PGSYIFELFAEAQLTFQTKGCILDSLDQIIQ----- 374
Query: 400 ESELPHLSGMSVI-----TLEGLFSSLTYFFSRNGSHVSDYQL----ALQKYIKRDSKNP 450
HL+G + + L+ L + FS + S S L ALQ Y +
Sbjct: 375 -----HLAGRAGVFTNTAGLQKLADIIQIVFSVDPSEGSPGFLEGLGALQSYKVHIHPDA 429
Query: 451 GGN--------WTHT--------LSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFS 493
G W+ T LS WC +P +++ + ++ILTSGTL+P++SF+
Sbjct: 430 GHRRAVQRSDAWSTTAARKPGKVLSYWCFSPGHSMRELVRQGVRALILTSGTLAPVSSFA 489
Query: 494 SELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTA---------------- 537
E+ + F CLE PH+ID Q+ V+ GPD L++++
Sbjct: 490 LEMQIPFPVCLENPHIIDKH-QIWVGVVPRGPDGAQLSSAFDRRFSEECLSSLGKALGNI 548
Query: 538 ------------DGYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYY 585
Y +MEK WR ++ A KPLFVEP+ S+ F + YY
Sbjct: 549 ARVVPCGLLVFFPSYPVMEKSLEFWRARDLARKIEALKPLFVEPR--SKVSFSETISAYY 606
Query: 586 NSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGK------------ 633
I+ + GA+FLAVCRGK
Sbjct: 607 ERIT----------------------------SPGSTGAAFLAVCRGKASEGLDFSDTNG 638
Query: 634 ---IVVGIPFPNINDIQVSLKKKYNDTYR----SSKNLLSGNEWYCNQAFRALNQAIGRC 686
IV G+P+P D +V LK ++ D + + LSG EWY QA RA+NQAIGR
Sbjct: 639 RGVIVTGLPYPPRMDPRVVLKMQFLDEMKGQGGAGGQFLSGQEWYRQQASRAVNQAIGRV 698
Query: 687 IRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
IRHR DYGA+ L D RF RA + W+R ++ YD+F + + FFR
Sbjct: 699 IRHRQDYGAVFLCDHRFAFADARAQLPSWVRPHVRVYDNFGHVIRDVVQFFR 750
>gi|123486053|ref|XP_001324631.1| helicase [Trichomonas vaginalis G3]
gi|121907517|gb|EAY12408.1| helicase, putative [Trichomonas vaginalis G3]
Length = 880
Score = 303 bits (776), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 233/793 (29%), Positives = 376/793 (47%), Gaps = 163/793 (20%)
Query: 22 GIQVEFPYQ-PYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQ 80
GI V+FP+ PY +Q M + + L +++ +ALLESPTGTGK+LSLL S+L +Q
Sbjct: 2 GIDVDFPFSTPYPAQKAIMAKTMVALKQSE-----NALLESPTGTGKTLSLLASSLGYQ- 55
Query: 81 NCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKK 140
L++Q KP+ DP A G E P T ++
Sbjct: 56 -TWLQSQ-------KPEPPKKIDPAALYGEKYTELDPET-------------------EE 88
Query: 141 KMTPTIFYASRTHSQISQVISEYKKT--AYRVPMAVLASRKHYCTNKYVRDKENIDEECK 198
+ ++Y SRTH+Q+SQV+SE K+ YR MA+LASR+ C N VR+K +ID C+
Sbjct: 89 EPQLKVYYTSRTHNQLSQVVSELKRKLPTYRPKMAILASRQQLCINDNVRNKPDIDAACR 148
Query: 199 LLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADD 258
L G ++ C K++ R S+ G + +DIE+L++V + C Y+ R++A
Sbjct: 149 LEHGTKH-NCEFGKSMTIPR---SMMPDGEYSKYDIENLIDVCREEVKCPYFVTRNLAKR 204
Query: 259 AQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQME 318
A+ + PY+YI++ IRG M++++ +++I DE HNIE I RDA S+ +D + +Q
Sbjct: 205 AEFILAPYNYILDGRIRGTMKIELANSVVIFDEGHNIEGICRDAASLSLDYKEVSYIQGY 264
Query: 319 LEQVCSVNPM-------IYQPLIEMTQ---DLVGWIER------------RKATLAK-RE 355
+ + M ++Q + + + + W R R+ T + ++
Sbjct: 265 IATLAQREDMRLQIGNTLFQHFLSIGRLFDKIFEWFTRTIEESPWEQNRNRQETFFQYQD 324
Query: 356 FQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVITLE 415
+ S WT +K L + ++ E + K D +S +P + L
Sbjct: 325 VEMILSGWTLNKERFVLYKEDME--------EIISANEKTTGDQDSIIPTIVAA---ILG 373
Query: 416 GLFSSLTYFFSRNGSHVSDYQLALQKYIK-RDSKNPGGNWTHTLSLWCLNPAVVFKDVAE 474
++L + ++ + + D++L + Y K ++ NP L L C++P V F+ +
Sbjct: 374 KTLTTLNFIYTNDS--ICDFRLIITDYEKNKEEINP------KLELLCMSPGVAFRSIVA 425
Query: 475 LSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVI---------STGP 525
+ S+I+TSGTLSP+ + SEL +F L A HVID QVL+ +I ST
Sbjct: 426 KTHSVIITSGTLSPLTQYESELRTKFTHQLSAKHVIDPS-QVLSMIIQRMDGVELTSTAK 484
Query: 526 D----------NYPLNASYKTADGYKL-------MEKLCNRWRETGQWSRLNAKKPLFVE 568
+ L K DG L M K WR + KP+F E
Sbjct: 485 SLNNNIYKKLGDIVLTIVQKVPDGILLFFPSGSTMRKCLEIWRSESLLYEIQKFKPVFNE 544
Query: 569 PKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLA 628
G ++ K Y +SI++G KG ++
Sbjct: 545 NSGNKKKGEGDAFKEYRSSINKG------------------------------KGGLLIS 574
Query: 629 VCRGK---------------IVVGIPFPNINDIQVSLKKKYNDTYRSSKNL----LSGNE 669
VCRG+ I+ GIP+P++ ++ LK+ YND + KN+ G+E
Sbjct: 575 VCRGRVSEGTDFADRQARCVIIFGIPYPSLYAPEIILKRNYNDDHAKQKNVEFATSDGSE 634
Query: 670 WYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDAS 729
WY QAFRAL+QA+GRCIRH+ DYG+II++D RF +ER++ +W++ +K+ S
Sbjct: 635 WYSAQAFRALSQAVGRCIRHKDDYGSIIMIDSRFMQERSK--FPRWMQDGLKRNPITSLS 692
Query: 730 LEG--LKSFFRDV 740
G L +F++D+
Sbjct: 693 ELGGQLANFYQDM 705
>gi|321469304|gb|EFX80285.1| hypothetical protein DAPPUDRAFT_128417 [Daphnia pulex]
Length = 892
Score = 303 bits (775), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 234/817 (28%), Positives = 362/817 (44%), Gaps = 176/817 (21%)
Query: 23 IQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNC 82
+ +EFP+QPY Q FM RVI L + + LLESPTGTGK+L LLCSTL W
Sbjct: 9 VPIEFPFQPYDVQEKFMERVIECLQKG-----VNGLLESPTGTGKTLCLLCSTLGW---- 59
Query: 83 KLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKKM 142
L + A I + LA G ++Q S G A
Sbjct: 60 -LATRKAQIQSGQ---------LAGDMGVDIKNQLSNATGLGWGDAATPGAG-------- 101
Query: 143 TPTIFYASRTHSQISQVISEYKKTAYR-VPMAVLASRKHYCTNKYVRDKENIDEE---CK 198
P I YASRTHSQ+SQVISE K+++YR + + +L SR C + V + N + C
Sbjct: 102 VPKIIYASRTHSQLSQVISELKRSSYRYMKVCILGSRDQLCIHPEVSKETNNAVKLHMCH 161
Query: 199 LLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADD 258
R C N+ + P + +V DIEDLV +G+ C Y+ + +
Sbjct: 162 ARTTTRT--CYFHTNLDAKKEEPDFK----MDVLDIEDLVTLGKKHSACPYFMTKEIRKG 215
Query: 259 AQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDI----------- 307
A ++F PY+Y+++P +R ++++G I+I DEAHN+E + ++ S+++
Sbjct: 216 ADIIFMPYNYLLDPKVRKIHNIELQGNIVIFDEAHNVEKMCEESSSIELRSLDIALCVDE 275
Query: 308 ------------------DEDVLLKL-------QMELEQVCSVNPMIYQPLIEMTQDLVG 342
D D ++ + L+ +C + M + +E D +
Sbjct: 276 VTQRYFLLQVMKKFRENSDNDGIMDILSPSTPKDFSLDDLCILKAMFLE--LEKAIDAIP 333
Query: 343 WIERRKATLAKREFQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESE 402
TL G+ L L +A++S ++ + + I+ T +
Sbjct: 334 ITSPEGNTLP------------GEFMLDILAKADLSPGKKDVIADLLDRVIQFLTVANTS 381
Query: 403 LPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRD---SKNPGGNWT---- 455
G + L + H+ + + + +IK + S+ G +W+
Sbjct: 382 PYQRKGTGLQKFSDLVKIVFSKSHFTADHMERVKRSYKVHIKVEQPKSRGKGDSWSTPKV 441
Query: 456 -----HTLSLWCLNPAVVFKD-VAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHV 509
LS WC +P +D V E + +ILTSGTLSP+NSF++EL V F LE PH+
Sbjct: 442 VGKAGRVLSYWCFSPGFGMRDLVEEGARCLILTSGTLSPLNSFAAELQVPFPVTLENPHI 501
Query: 510 IDVDLQVLTSVISTGPDNYPLNASYK---------------------TADG-------YK 541
I QVL V++ GPD L++SYK DG Y
Sbjct: 502 ISSS-QVLVGVVTHGPDGTQLDSSYKNRSNSQYVQSLGRTIRSTAQVVPDGLLVFFPSYP 560
Query: 542 LMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKR 601
+M+ W+ +G W +N KP+FVEP S+E F+ + +YN+++
Sbjct: 561 VMKACQEAWQLSGLWDAINQVKPIFVEP--NSKEGFQEAMTGFYNAVA------------ 606
Query: 602 VKREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDI 646
+ ++KGA F+AVCRGK I+ G+P+P D
Sbjct: 607 ----------------SEDRKGACFMAVCRGKVSEGLDFCDGNGRAVIITGLPYPPSRDP 650
Query: 647 QVSLKKKYNDTYRSSKNL--LSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQ 704
+V K+KY + R + L+G +WY +A RA+NQAIGR IRH+ DYGAI+L D+RF
Sbjct: 651 RVMEKQKYLEDNRKNPQFKGLTGQQWYRLEATRAVNQAIGRVIRHQKDYGAILLCDQRFS 710
Query: 705 EERNRAHISKWLRKSIKQYDSFDASLEGLKSFFRDVK 741
+ +S W+R + + L L FFR+ +
Sbjct: 711 GKDIIQQLSAWVRPRVVNFPKIGPLLRDLGIFFRNAE 747
>gi|168269672|dbj|BAG09963.1| tumor necrosis factor receptor superfamily member 6B precursor
[synthetic construct]
Length = 1400
Score = 302 bits (774), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 243/813 (29%), Positives = 366/813 (45%), Gaps = 166/813 (20%)
Query: 22 GIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQN 81
G+ V+FP+QPY Q +M +V+ L + + +LESPTGTGK+L LLC+TLAW+++
Sbjct: 8 GVTVDFPFQPYKCQQEYMTKVLECLQQK-----VNGILESPTGTGKTLCLLCTTLAWREH 62
Query: 82 CKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKK 141
+ IS K A G P+ S+ + +A
Sbjct: 63 LR-----DGISARKIAERAQ-------GELFPDRALSSWGNAAAAAGDPIACYTD----- 105
Query: 142 MTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE---CK 198
P I YASRTHSQ++QVI+E + T+YR + VL SR+ C + V+ +E+ + C+
Sbjct: 106 -IPKIIYASRTHSQLTQVINELRNTSYRPKVCVLGSREQLCIHPEVKKQESNHLQIHLCR 164
Query: 199 LLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADD 258
+ R+ C + NV + SL++ + DIEDLV G R C YY +R++
Sbjct: 165 KKVASRS--CHFYNNVEEK----SLEQELASPILDIEDLVKSGSKHRVCPYYLSRNLKQQ 218
Query: 259 AQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDE--------- 309
A ++F PY+Y+++ R A +D+KG ++I DEAHN+E + ++ S D+
Sbjct: 219 ADIIFMPYNYLLDAKSRRAHNIDLKGTVVIFDEAHNVEKMCEESASFDLTPHDLASGLDV 278
Query: 310 -DVLLKLQMELEQVCSVNPMIY----QPLIEMTQDLVGWIE----RRKATLAKREFQHFF 360
D +L+ Q + +P P + M + + ++ R + + E
Sbjct: 279 IDQVLEEQTKAAHEGEPHPEFSADSPSPGLNMELEDIAKLKMILLRLEGAIDAVELPGDD 338
Query: 361 SCWT--GDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVI-----T 413
S T G EA I+ Q +L+ + I+ HL+G + +
Sbjct: 339 SGVTKPGSYIFELFAEAQITFQTKGCILDSLDQIIQ----------HLAGRAGVFTNTAG 388
Query: 414 LEGLFSSLTYFFSRN---GSHVSDYQL-ALQKYI--------KRDSKNPGGNWTHT---- 457
L+ L + FS + GS S L ALQ Y R + W+ T
Sbjct: 389 LQKLADIIQIVFSVDPSEGSPGSPAGLGALQSYKVHIHPDAGHRRTAQRSDAWSTTAARK 448
Query: 458 ----LSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDV 512
LS WC +P ++ + S+ILTSGTL+P++SF+ E+ + F CLE PH+ID
Sbjct: 449 RGKVLSYWCFSPGHSMHELVRQGVRSLILTSGTLAPVSSFALEMQIPFPVCLENPHIIDK 508
Query: 513 DLQVLTSVISTGPDNYPLNASYKTA----------------------------DGYKLME 544
Q+ V+ GPD L++++ Y +ME
Sbjct: 509 H-QIWVGVVPRGPDGAQLSSAFDRRFSEECLSSLGKALGNIARVVPYGLLIFFPSYPVME 567
Query: 545 KLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKR 604
K WR ++ A KPLFVEP+ S+ F + YY RV
Sbjct: 568 KSLEFWRARDLARKMEALKPLFVEPR--SKGSFSETISAYY--------------ARVAA 611
Query: 605 EGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVS 649
G+ GA+FLAVCRGK IV G+P+P D +V
Sbjct: 612 PGST--------------GATFLAVCRGKASEGLDFSDTNGRGVIVTGLPYPPRMDPRVV 657
Query: 650 LKKKYNDTYR----SSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQE 705
LK ++ D + + LSG EWY QA RA+NQAIGR IRHR DYGA+ L D RF
Sbjct: 658 LKMQFLDEMKGQGGAGGQFLSGQEWYRQQASRAVNQAIGRVIRHRQDYGAVFLCDHRFAF 717
Query: 706 ERNRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
RA + W+R ++ YD+F + + FFR
Sbjct: 718 ADARAQLPSWVRPHVRVYDNFGHVIRDVAQFFR 750
>gi|351714866|gb|EHB17785.1| Regulator of telomere elongation helicase 1, partial
[Heterocephalus glaber]
Length = 1184
Score = 302 bits (774), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 241/813 (29%), Positives = 374/813 (46%), Gaps = 168/813 (20%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ G+ V+FP+QPY Q +M +V+ L + + +LESPTGTGK+L LLC+TLAW+
Sbjct: 6 LNGVTVDFPFQPYQCQQEYMSKVLECLQK-----KVNGILESPTGTGKTLCLLCTTLAWR 60
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVK 139
++ L + ++ E A G F+ ++ S +T +A
Sbjct: 61 EH------LWDTVSARKIAER-----AQGELFLDQAL-SAWGSATAADGEPIACYTD--- 105
Query: 140 KKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE--- 196
P I YASRTHSQ++QVI+E + TAYR + VL SR+ C + V+ +E+ +
Sbjct: 106 ---IPKIIYASRTHSQLTQVINELRNTAYRPRVCVLGSREQLCIHPEVKKQESNHMQIHL 162
Query: 197 CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMA 256
C+ + R+ C + NV + SL++ + DIEDLV G + C YY +R++
Sbjct: 163 CRKKVASRS--CHFYNNVEE----KSLEQELVTPILDIEDLVKNGSKHKVCPYYLSRNLK 216
Query: 257 DDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDI--------- 307
A ++F PY+Y+++ R A +D+KG ++I DEAHN+E + ++ S D+
Sbjct: 217 QQADIIFMPYNYLLDAKSRKAHNIDLKGTVVIFDEAHNVEKMCEESASFDLTPHDVASGL 276
Query: 308 -------DEDVLLKLQMELEQVCSVNP------MIYQPLIEMTQDLVGWIERRKATLAKR 354
+E + Q EL+ S++P M + + ++ L+ R + +
Sbjct: 277 DAIGQVLEEQTRVVQQSELQLGLSLDPTSSGLNMQLEDIAKLKMILL----RLEGAIDAV 332
Query: 355 EFQHFFSCWT--GDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVI 412
+ S T G EA I+ Q +LE + I+ HL+G + +
Sbjct: 333 QLPGDGSGVTKPGSYIFNLFAEAQITFQSKVCILESLDQIIQ----------HLAGRAGV 382
Query: 413 -----TLEGLFSSLTYFFSRNGSHVS-----DYQLALQKYI-KRDSKNPGGNWT------ 455
L+ L + FS + + S Y++ + I R + W+
Sbjct: 383 FTNTAGLQKLMDIIQIVFSVDPTEGSPGISQSYKVHIHPDIGPRRAAQRSDAWSAATSRK 442
Query: 456 --HTLSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDV 512
LS WC +P +++ + ++ILTSGTL+P++SF E+ + F CLE PHVID
Sbjct: 443 QGKVLSYWCFSPGHSMQELLRQGVRTVILTSGTLAPLSSFVLEMQIPFPVCLENPHVIDK 502
Query: 513 DLQVLTSVISTGPDNYPLNASY-------------KTAD---------------GYKLME 544
Q+ VI GPD L++++ KT Y +ME
Sbjct: 503 H-QLWVGVIPRGPDGAELSSAFDKRFSEECLSSLGKTLGNIARVVPHGLLVFFPSYPVME 561
Query: 545 KLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKR 604
WR ++ KPLFVEP+ S+ F V+ YY +RV
Sbjct: 562 NSLAFWRARDLARKVEVLKPLFVEPR--SKGSFSEVIDAYY--------------QRVAS 605
Query: 605 EGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVS 649
G++ GA+FLAVCRGK I+ G+P+P D +V
Sbjct: 606 PGSS--------------GATFLAVCRGKASEGLDFSDINGRGVIITGLPYPPRMDPRVV 651
Query: 650 LKKKYNDTYR----SSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQE 705
LK ++ D R + LSG EWY QA RA+NQAIGR IRHR DYGAI L D RF
Sbjct: 652 LKMQFLDEMRGQSQAGGQFLSGQEWYRQQASRAVNQAIGRVIRHRHDYGAIFLCDHRFTY 711
Query: 706 ERNRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
+A + W+R +K Y++F + + FFR
Sbjct: 712 ADAKAQLPSWVRPYLKVYNNFGHVIRDVAQFFR 744
>gi|91080377|ref|XP_975038.1| PREDICTED: similar to fanconi anemia group J protein [Tribolium
castaneum]
Length = 750
Score = 302 bits (774), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 227/803 (28%), Positives = 365/803 (45%), Gaps = 176/803 (21%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ G+ V+FP+ PY Q +M +VI L+ Q + +LESPTGTGK+LSLLC++LAW
Sbjct: 6 IRGVPVKFPFAPYDIQTKYMEKVIDCLENRQ-----NGILESPTGTGKTLSLLCASLAW- 59
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVK 139
EA + A +S P T+P
Sbjct: 60 ------------------LEARREKFAAQPKKCDDSPPITLP------------------ 83
Query: 140 KKMTPTIFYASRTHSQISQVISEYKKTAY-RVPMAVLASRKHYCTNKYVRDKENIDEECK 198
I YASRTH+Q+SQ + E K+TAY + VL SR C + V ++N +
Sbjct: 84 -----RIIYASRTHTQLSQAMQEMKRTAYNHLKACVLGSRDQMCIDPEVIQEKNASFKVN 138
Query: 199 LLLGD-RNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMAD 257
L + C ++ + + P + + DIED+V +G+ C Y+ AR + +
Sbjct: 139 LCRAKVKRKQCKYYQRIERASHVPPVSD---LNIIDIEDVVKLGRECDFCPYHMARELKN 195
Query: 258 DAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQM 317
+ +VF PY+Y+++P M+V+I G I+I DEAHNIE I D+ SV I +
Sbjct: 196 RSDVVFMPYNYLLDPRTSKNMDVEIFGNIIIFDEAHNIEKICEDSVSVQIKSS---DVDS 252
Query: 318 ELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTG-DKALRELQEAN 376
+E V SVN ++ + G+++ + Q F T ++ L +++
Sbjct: 253 AVEDVESVNEVLTK----------GFVDVENVAFTSEDLQTFSQMLTKFNRELNGIKQFK 302
Query: 377 ISRQCFPILLECATKAIKEATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQ 436
+++ + + K+A E +S + V L+ F S T + R+G + +
Sbjct: 303 LTQAGSVFDGDYIFEMFKKAEIFEENSSGISDLIVGVLD--FMSTTSYIQRSGFGLQIFN 360
Query: 437 ----LALQK-----------------------YIKRD--SKN-PGGNWTHTLSLWCLNPA 466
+A K Y++R S+N N L+ WC +P
Sbjct: 361 NLLFIAFYKQGPEFRQKIKECFKVQVEDERPEYVRRTRYSQNMDKKNTCRVLNFWCFSPG 420
Query: 467 VVFKDVAELSLS-IILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGP 525
+ + ++ +ILTSGTL+P+ SEL ++ G +E PH++ D QV ++S GP
Sbjct: 421 FAMNMLMDRNIHCVILTSGTLAPLKPLISELELEIGVRIENPHIVKGD-QVCVKILSKGP 479
Query: 526 DNYPLNASYK---------------------TADG-------YKLMEKLCNRWRETGQWS 557
D PLN++++ DG Y +M+K W+ G W
Sbjct: 480 DMEPLNSNFENRSNPKYLQSLGLVISNLIRVIPDGVLIFFPSYVIMQKTIEHWQNDGTWD 539
Query: 558 RLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQE 617
+N KP+++EPK + +F + YY I +
Sbjct: 540 SINRTKPIYIEPK--DKIEFATAMSEYYAKI----------------------------Q 569
Query: 618 NANKKGASFLAVCRGKI---------------VVGIPFPNINDIQVSLKKKYNDTYRSSK 662
+ + GA F+ VCRGK+ + G+P+P + D ++ LKK+Y D +R SK
Sbjct: 570 DPSYSGAIFMGVCRGKVSEGLDFADINGRAVFITGLPYPPLKDPKIILKKQYLD-FRYSK 628
Query: 663 N--LLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSI 720
N L G++WY +A RA+NQAIGR IRH+ DYGAIILLD RF R + ++S WLR+ I
Sbjct: 629 NKEYLKGDDWYSLEATRAINQAIGRVIRHKSDYGAIILLDSRFTNPRIKNNLSLWLRQHI 688
Query: 721 KQYDSFDASLEGLKSFFRDVKGW 743
+F + ++ FF++ + +
Sbjct: 689 TDMKNFGEIIRNVRVFFQNAQKF 711
>gi|345789824|ref|XP_543101.3| PREDICTED: regulator of telomere elongation helicase 1 [Canis lupus
familiaris]
Length = 1689
Score = 301 bits (772), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 246/817 (30%), Positives = 372/817 (45%), Gaps = 176/817 (21%)
Query: 22 GIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQN 81
G+ V+FP++PY Q +M +V+ L + + +LESPTGTGK+L LLCSTLAW+++
Sbjct: 8 GVAVDFPFEPYKCQEEYMSKVLECLQK-----RVNGILESPTGTGKTLCLLCSTLAWREH 62
Query: 82 CKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKK 141
+ I+ + E D T A +
Sbjct: 63 LRDAISAHKIA-ERVQGELFLD-------------------RTLSSWGDAAADAGAACYA 102
Query: 142 MTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE---CK 198
P I YASRTHSQ++QVI E + T+YR + VL SR+ C + V+ +E+ + C+
Sbjct: 103 DIPKIIYASRTHSQLTQVIRELRNTSYRPRVCVLGSREQLCIHPEVKKQESNHMQIHLCR 162
Query: 199 LLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADD 258
+ R+ C + NV + SL++ + DIEDLV G + C YY +R++
Sbjct: 163 KKVASRS--CHFYNNVEEK----SLEQELATPILDIEDLVKSGNKHKLCPYYLSRNLKQQ 216
Query: 259 AQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDI-DEDVLLKLQM 317
A ++F PY+Y+++ R A +D+KG ++I DEAHN+E + + S D+ DV L +
Sbjct: 217 ADIIFMPYNYLLDTKSRRAHSIDLKGTVVIFDEAHNVEKMCEETASFDLTPHDVASGLDV 276
Query: 318 ELEQVC-------------------SVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQH 358
L+QV SVN ++ L ++ + L + R +A + E
Sbjct: 277 -LDQVLEEQTKAAQQDELRSEFSADSVNSGLHMELEDLAK-LKMILLRLEAAIDAVELPG 334
Query: 359 FFSCWT--GDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVI---- 412
S T G EA I+ Q +L+ + I+ HL+G + +
Sbjct: 335 DHSGVTKPGSYIFELFAEAQITFQTKGCILDSLDQIIQ----------HLAGRTGLFSNT 384
Query: 413 -TLEGLFSSLTYFFSRNGSHVSDYQL----ALQKY---IKRDS----KNPGGN-WTHT-- 457
L+ L + FS + + + L A Q Y I D+ K P + W+ T
Sbjct: 385 AGLQKLSDIIQIVFSADPAEGTPGSLGGPGACQSYKVHIHPDAGHHRKGPRSDAWSSTAA 444
Query: 458 ------LSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVI 510
LS WC +P + + + + ++ILTSGTL+P++SF+ E+ + F CLE PHVI
Sbjct: 445 RKPGKVLSYWCFSPGHSMRQLVQQGVRTVILTSGTLAPVSSFALEMQIPFPVCLENPHVI 504
Query: 511 DVDLQVLTSVISTGPDNYPLNASYKTA----------------------------DGYKL 542
Q+ ++S GPD L++++ Y +
Sbjct: 505 HQQ-QIWVGIVSRGPDGAQLSSAFDKRFSEACLSSLGKALGNIARVVPHGLLVFFPSYPV 563
Query: 543 MEKLCNRWRETGQWSRLNAKKPLFVEP--KGGSQEDFEIVLKHYYNSISQGSKCAVVRKK 600
+E+ WR +L A KP+FVEP KGG F V+ YY
Sbjct: 564 LERSLQFWRTHDSAGKLEALKPVFVEPRNKGG----FSEVVDAYY--------------A 605
Query: 601 RVKREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNIND 645
RV G+ GA+FLAVCRGK I+ G+P+P D
Sbjct: 606 RVACPGST--------------GATFLAVCRGKASEGLDFADMNGRGVIITGLPYPPRMD 651
Query: 646 IQVSLKKKYNDTYRSSKN----LLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDE 701
+V LK ++ D ++ + LLSG+EWY QA RA+NQAIGR IRHR DYGAI L D
Sbjct: 652 PRVVLKMQFLDEIKNHRGPGGQLLSGHEWYRQQASRAVNQAIGRVIRHRHDYGAIFLCDH 711
Query: 702 RFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
RF RA + W+R ++ YDSF + + FFR
Sbjct: 712 RFAHVDARAQLPSWVRPHVRVYDSFGPVIRDVAQFFR 748
>gi|330843781|ref|XP_003293824.1| hypothetical protein DICPUDRAFT_5561 [Dictyostelium purpureum]
gi|325075810|gb|EGC29655.1| hypothetical protein DICPUDRAFT_5561 [Dictyostelium purpureum]
Length = 617
Score = 300 bits (769), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 221/690 (32%), Positives = 310/690 (44%), Gaps = 134/690 (19%)
Query: 22 GIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQN 81
G V+FP++PY SQ M R++S LD + + LLESPTGTGK+L+LLCS L W +
Sbjct: 1 GHTVKFPFKPYPSQASMMSRILSGLDNKE-----NCLLESPTGTGKTLTLLCSALEWHRE 55
Query: 82 CKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKK 141
LK N + S D DP+ N F P PS
Sbjct: 56 -DLKKSNNNNNGSDSDDTDSEDPVEN---FRP--NPS----------------------- 86
Query: 142 MTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEECKLLL 201
PTIF+ SRTHSQI Q+ E KT YR M V+ SR HYC NK ++D E CK ++
Sbjct: 87 --PTIFFCSRTHSQIKQLTEELAKTPYRPNMLVMGSRDHYCINKELKDVPRKKERCKKII 144
Query: 202 GDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQL 261
D GC +K + + +KGG +V DIEDL GQ C ++ ++ M + L
Sbjct: 145 KDP--GCRYYKKEFVLSSISTFRKGGAKQVWDIEDLKKAGQEHSECPFFVSKDMLPSSDL 202
Query: 262 VFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQ 321
VFCPY+Y+I+P IR ++ +K +I+I DEAHNIED DA S + D L + ++ +
Sbjct: 203 VFCPYNYLIDPSIRSTLKDKVKNSIVIFDEAHNIEDALMDASSFESTLDELYENVFQVLK 262
Query: 322 VCSVNPMIYQPLI-----------EMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALR 370
+NP I + L + +LV WI + +L +F+ W G + L
Sbjct: 263 QIRMNPKIIKNLSPEKEHAINIIHPIMDELVAWIREKSESLKPIDFEKHSRVWKGKEILD 322
Query: 371 ELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGS 430
LQ +S + + KA+ + TD + G LE FS + F +N +
Sbjct: 323 ILQGIGLSESNY-FEFSSSVKALSDETDDKQNKKDKLGKPSAILEE-FSKVIEFIFKNAN 380
Query: 431 HVSDYQLALQK-------YIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTS 483
V DY L LQK ++K K W +S+W L+P + F + + SIILTS
Sbjct: 381 WVDDYVLVLQKQTVLTNSFVK---KQQSSKWNLIVSIWALSPRIAFSSLNSKTHSIILTS 437
Query: 484 GTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTAD----- 538
GTLSP+ SF EL F E ++ D+ + +S G N ++ D
Sbjct: 438 GTLSPLYSFPFELASPFPISAEMGNLSDIKNRAWIGTLSHGVRNEKFLCTHGNTDSFSFQ 497
Query: 539 -----------------------GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQE 575
Y +EK+ +RW TG ++N KP F EPK + +
Sbjct: 498 DSLGETIIEHIKIIPSGVLCFFPSYGFLEKITDRWASTGLLDKINELKPAFAEPK--NIK 555
Query: 576 DFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGK-- 633
DF L Y ++ Q N KKGA AVCRGK
Sbjct: 556 DFNETLIGYRQTV---------------------------QSNP-KKGAILFAVCRGKVS 587
Query: 634 -------------IVVGIPFPNINDIQVSL 650
IVVGIP+PN+ D++V L
Sbjct: 588 EGIDFSDEYARGVIVVGIPYPNLKDLRVDL 617
>gi|312379509|gb|EFR25759.1| hypothetical protein AND_08621 [Anopheles darlingi]
Length = 972
Score = 300 bits (769), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 241/860 (28%), Positives = 375/860 (43%), Gaps = 219/860 (25%)
Query: 15 LNAYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCS 74
+ Y +GG+ V+FP++PY Q +M +++ L ++ + LLESPTGTGK+LS+LC+
Sbjct: 1 MPVYDIGGVPVDFPFEPYQVQRDYMSKLLQCLQQS-----TNGLLESPTGTGKTLSILCA 55
Query: 75 TLAWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMN 134
+LAW + HS+ +
Sbjct: 56 SLAW------------LVHSR--------------------------------------S 65
Query: 135 NKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYR-VPMAVLASRKHYCTNKYVRDKEN- 192
+ N K I YASRTHSQ+SQ + E KK++Y V VL SR C + V EN
Sbjct: 66 HHNATKAGRTKIIYASRTHSQLSQAMQELKKSSYNYVRAIVLGSRIQLCIHPDVPKSENN 125
Query: 193 --IDEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYY 250
+ CK + R+ C ++ V +++ L + DIEDLV VG + C +Y
Sbjct: 126 ATVTYLCKEKVATRS--CVYYRRVEQMKDSSELANV---PILDIEDLVTVGSRTKACPFY 180
Query: 251 AARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDED 310
++ M + A ++F PY+Y+++ R A ++++ +++ILDEAHN+E + D+GS +
Sbjct: 181 LSKEMVERADIIFMPYNYLLDAKARKANNLELQNSVIILDEAHNVERMCEDSGSAVLSST 240
Query: 311 VLLKLQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALR 370
+ + +E V V + + + + G E K+EF
Sbjct: 241 ---DIALAIEDVSHVMETMGE-----SASVAGLAETENE---KKEF-------------- 275
Query: 371 ELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVITLEGLFSS-LTYF----- 424
L E ++ +Q L + A+ E ++SG V++L G + LT
Sbjct: 276 SLHELSLLKQQLLDLEKSVDDIAFPASQREVHFHNVSG--VVSLFGAITGYLTTLSERNS 333
Query: 425 FSRNGS---HVSDYQLAL-----QKYI-------------------KRDSKNPGGNWTHT 457
F R GS VSD+ + ++YI KR+ K G WT T
Sbjct: 334 FKRRGSGLQAVSDFLEIVYAGQGEEYIAAVRRCFKVYVVAEEPKQTKRNFKRADG-WTAT 392
Query: 458 ---------------LSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFG 501
+ WC NP + +A + SI+LTSGTL+P+ +EL +
Sbjct: 393 NQPAAHAPLKSSAKIVHFWCFNPGFGMRQLASRGVRSIVLTSGTLAPLTPLINELNISIP 452
Query: 502 TCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTAD----------------------- 538
LE PH+ID QVL VI+ G D L++ Y +
Sbjct: 453 VTLENPHIIDRS-QVLVRVIAKGSDGQLLSSVYNNRNNPDYIRSLGRTLLSVCPVIPNGL 511
Query: 539 -----GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSK 593
Y +++K W+ G WS +N +K +FVEP+ +++ F + +Y I
Sbjct: 512 LVFFPSYTVLDKCVEGWQSGGLWSEINNRKAIFVEPR--TKDAFNTTMDEFYQRI----- 564
Query: 594 CAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKI---------------VVGI 638
++ KGA FLAVCRGK+ + G+
Sbjct: 565 -----------------------QDTQAKGAIFLAVCRGKVSEGLDFADINGRAVLITGL 601
Query: 639 PFPNINDIQVSLKKKYNDTYRSSKN-LLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAII 697
PFP ++D +V LKK+Y + R+ +N L++G+EWY QA RA+NQAIGR IRHR DYGAI+
Sbjct: 602 PFPPLHDPRVVLKKEYLTSNRTPENRLITGDEWYALQASRAVNQAIGRVIRHRNDYGAIL 661
Query: 698 LLDERFQEERNRAHISKWLRKSIKQ--YDSFDASLEGLKSFFRDVKGWVGKKMFNGLENS 755
L D RFQ + +S W+R + F ++ L +FFR K +
Sbjct: 662 LCDARFQNAHQQMQLSSWVRSHLVHDPNQRFGTVIKDLANFFRIAKNTAMPAAQREFQEK 721
Query: 756 DNDV-DHVSSMDQCKEVTKQ 774
D + D V+ C T Q
Sbjct: 722 DTGIGDKVNDSKLCSTSTNQ 741
>gi|298706777|emb|CBJ29700.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1061
Score = 299 bits (765), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 225/744 (30%), Positives = 347/744 (46%), Gaps = 148/744 (19%)
Query: 94 SKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKKMTPTIFYASRTH 153
KP +EAVT P + P G+ + + ++K P +++ SRTH
Sbjct: 196 GKPPSEAVT--------------PDDVKPKKRGKAVK-----QEARRKRAPRVYFCSRTH 236
Query: 154 SQISQVISEYK--KTAYR-------------VPMAVLASRKHYCTNKYV-RDKENIDEEC 197
SQ++QV++E + +TA++ MA+LASRK C N+ D + ID+ C
Sbjct: 237 SQLNQVVAELRTCRTAFQDTSAVGIGDDGKPFSMALLASRKSTCINREACSDPKGIDDAC 296
Query: 198 KLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMAD 257
K LL ++ C ++ + V D+E+ V +GQ + C YY AR+
Sbjct: 297 KRLLKEK--ACTYYRRA-------KWAQTKLPPVWDVEEAVRMGQENQACPYYTARASLV 347
Query: 258 DAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQM 317
+A LV CPY+Y+++P +R M +++K A++I DEAHN+ED AR+A S + L
Sbjct: 348 NADLVLCPYNYLVDPGVREIMGINLKNAVVIFDEAHNLEDSAREAASAKLSLRALANAAG 407
Query: 318 ELEQV----CSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRELQ 373
E+ ++ S++P Y L + + ++E + L ++ + G +AL +Q
Sbjct: 408 EMHRLGAKSLSLSPS-YDLLRGVIIGVQAFLEEEDSRLTIGSYEKAHKVYKGAEALGLMQ 466
Query: 374 -EANISRQCFPILLECATKAIKEATDTE---------SELPH-------LSGMSVITLEG 416
A ++ + L E I E + + + H LS SV
Sbjct: 467 SRAGVTSESLVYLKEALKMVINEDGNADPYARDQADGASFDHRLGGDEVLSSGSVHVTAS 526
Query: 417 LFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHT----------------LSL 460
L L + + +V Y++ + + +R P + L
Sbjct: 527 LVKVLGFLLTEGMENVDHYKMVVLR--ERGPWEPVSSRGRRGRNRPGSGSITAMETYLCF 584
Query: 461 WCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVL-TS 519
WC + + F ++ + S++LTSGTLSPMNSF+ ELG++F LEA HVI+V Q L TS
Sbjct: 585 WCQSASTCFSEIDKQVHSVVLTSGTLSPMNSFAGELGIEFPHRLEANHVINVKKQCLVTS 644
Query: 520 VISTGPDNYPLNASY------KTADG----------------------YKLMEKLCNRWR 551
V G L+A Y K D Y LM+K+ +RW
Sbjct: 645 VGYFG--KVSLDARYTNQHDLKYQDALGNALLQHARVVPGGILVFFPSYGLMDKMHDRWE 702
Query: 552 ETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLN 611
TG L K +++EP+G Q + VL YY I A R+ + +E +
Sbjct: 703 VTGLLQALQEIKGVYLEPRG--QGKIDGVLAEYYEDI------AAARENQSSKENQYHSS 754
Query: 612 TIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKKYND 656
T + GA LAV RGK ++VGIP+P+ D+QV LKK+Y D
Sbjct: 755 T--------RTGAMMLAVARGKVSEGIDFSDDAARMCVIVGIPYPSSKDLQVMLKKEYQD 806
Query: 657 TYRS-SKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEE-RNRAHISK 714
R+ L+ G WY QAFRA+NQA+GRCIRHR D+GAI+L D R+ A +SK
Sbjct: 807 QRRTRDPRLVGGRAWYSLQAFRAVNQAVGRCIRHRSDFGAIVLCDPRYASSTETTASLSK 866
Query: 715 WLRKSIKQYDSFDASLEGLKSFFR 738
W+R S++Q S + SL +++FFR
Sbjct: 867 WVRSSVRQCRSVEVSLPLVEAFFR 890
Score = 42.7 bits (99), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 50/90 (55%), Gaps = 7/90 (7%)
Query: 16 NAYHVGGIQVEFP--YQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLC 73
N + G V FP +P+ QL M +++ + + + + LLESPTGTGK+L+LLC
Sbjct: 5 NIIMIRGFPVSFPKGRKPFAPQLALMSKLLVGVQKGE-----NCLLESPTGTGKTLALLC 59
Query: 74 STLAWQQNCKLKNQLANISHSKPDTEAVTD 103
+ LAWQ+ + + A S + + E + D
Sbjct: 60 AALAWQRQQREQGVAAETSDCESEEEPMID 89
>gi|380013392|ref|XP_003690744.1| PREDICTED: regulator of telomere elongation helicase 1 homolog,
partial [Apis florea]
Length = 970
Score = 298 bits (763), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 235/802 (29%), Positives = 377/802 (47%), Gaps = 143/802 (17%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ I V FP++PY Q +M +VI L ++ + +LESPTGTGK+LSLLCS+L+W
Sbjct: 6 INNIIVNFPFKPYSIQEEYMAKVIQCLQNSK-----NGVLESPTGTGKTLSLLCSSLSWL 60
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVK 139
+ K + Q ++ + + +P +G F Q + + G T + N N
Sbjct: 61 LSKKAQLQAQSLMNK------IEEPNFSGHFF---KQLNNGLKKSTGDTEPTIVFNWN-- 109
Query: 140 KKMTPTIFYASRTHSQISQVISEYKKTAYR-VPMAVLASRKHYCTNKYVRDKENIDEECK 198
P I YASRTHSQ+SQ + E K+T+Y+ V AVL SR C + V + N +
Sbjct: 110 ---APKIIYASRTHSQLSQAMQELKRTSYKHVGTAVLGSRDQLCIHPEVSKETNSSNKIY 166
Query: 199 LLLGD-RNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMAD 257
+ ++ C + NV + P ++ E+ DIEDLV GQ + C Y+ +R +
Sbjct: 167 MCHSKVKSRTCFYYNNVESRKDDPFFKQ----EILDIEDLVKAGQKFKCCPYFLSRELKQ 222
Query: 258 DAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDID--------E 309
+A ++F PY+YI++ R +DI+ I++ DEAHNIE I + S+ I +
Sbjct: 223 NADIIFMPYNYILDTKSRKIQGIDIQNNIILFDEAHNIEKICEETASLQISSTDIAMCID 282
Query: 310 DVLLKLQMELEQVCSVNPMIYQPLIEMTQDLVG---------WIERRKA----TLAKREF 356
++ + ++ + + N + + + +D ++E KA ++ KR+
Sbjct: 283 EITVVMEDMAKDIEQQNNFLMENSENVQKDFTADDLCILKAMFLELEKAIDDISIVKRDE 342
Query: 357 QHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVITLEG 416
F G L +A ++ +++E K + T T + G ++
Sbjct: 343 GDTFP---GGYIFELLGKAQLTHGREQLVIEKLEKIVFYLTTTSTSPFTRKGNALQKFSD 399
Query: 417 LFSSLTYFFSRNGSHVSD------YQLALQKYIKRDSKNPG---------GNWTHTLSLW 461
L + FS + S +S Y++ +Q ++ SK N ++ W
Sbjct: 400 LLKTA---FSSDNSLLSKEKIKQYYKVYIQLEEQKKSKQNDVWEKKKILPKNEGKIINYW 456
Query: 462 CLNPAVVFKDVAEL-SLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSV 520
C +P + + + + +IILTSGTLSP+ F SELG+ LE H++ D Q+ +
Sbjct: 457 CFSPGFSMQQLKDQGTRAIILTSGTLSPLKPFISELGIPIEVQLENSHIVKED-QICVGI 515
Query: 521 ISTGPDNYPLNASYKTAD----------------------------GYKLMEKLCNRWRE 552
+S GPD Y LN+S+ T + Y +M+K W+
Sbjct: 516 LSRGPDGYSLNSSFNTRNDPKYIGSLGQTIFNFSCLVPYGLLVFFPSYPIMKKCKEEWQN 575
Query: 553 TGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNT 612
TG W+++ +KP++VEP+ ++ F V+ YY I
Sbjct: 576 TGLWTKIADRKPIYVEPQ--YKDGFINVMNEYYEKI------------------------ 609
Query: 613 IESQENANKKGASFLAVCRGKI---------------VVGIPFPNINDIQVSLKKKY-ND 656
N + KGA F+AVCRGK+ + G+PFP + D +V LK++Y +
Sbjct: 610 ----RNPSCKGAIFMAVCRGKVSEGLDFANANGRAVLITGLPFPPLKDPRVILKQRYLEE 665
Query: 657 TYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWL 716
+ K +LSG +WY +A RA+NQAIGR IRH+ DYGAIIL D RF + H+S WL
Sbjct: 666 IKKQDKEVLSGQQWYQLEASRAVNQAIGRIIRHKNDYGAIILCDHRFDNPNFKKHLSAWL 725
Query: 717 RKSIKQYDSFDASLEGLKSFFR 738
R IK + F ++ LK FFR
Sbjct: 726 RPHIKNFTCFGVIIKELKGFFR 747
>gi|196008361|ref|XP_002114046.1| hypothetical protein TRIADDRAFT_27892 [Trichoplax adhaerens]
gi|190583065|gb|EDV23136.1| hypothetical protein TRIADDRAFT_27892 [Trichoplax adhaerens]
Length = 702
Score = 298 bits (762), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 234/785 (29%), Positives = 350/785 (44%), Gaps = 168/785 (21%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
V GI+V+FP+ PY QL +M VI L + + +LESPTGTGK+L LLC+ LAW+
Sbjct: 6 VRGIEVDFPFNPYPCQLDYMTNVIQCLQEGK-----NGILESPTGTGKTLCLLCACLAWR 60
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVK 139
Q + QL Q N N
Sbjct: 61 QTYVAQVQL-----------------------------------NQRIQMQQLQQNPNTD 85
Query: 140 KKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE--- 196
+ M P I Y+SRTHSQ+SQV++E K T YR + +L SR+ C + V ++ +
Sbjct: 86 RNM-PKIIYSSRTHSQLSQVVNELKHTIYRPKICILGSREQMCIHPEVAKLQSNTAKIHA 144
Query: 197 CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMA 256
C+ + R C NV + PS + + DIE+LV +G + C YY AR +
Sbjct: 145 CRAKVNART--CHFCNNVETKKDDPSFSEN----ILDIEELVELGGKQKVCPYYMARELR 198
Query: 257 DDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQ 316
+A +VF PY+Y+I+ R + +D+K AI+I DEAHN+E I D+ S D+ +
Sbjct: 199 SNADIVFMPYNYLIDFKSRQSNSIDMKNAIIICDEAHNLEKICEDSASFDLSSADIANC- 257
Query: 317 MELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQ--------HFFSCWTGDKA 368
I+ + + ++R K+T E+ + C T
Sbjct: 258 -----------------IDEVDNFINILQRIKSTTDSEEYDATGMRCNVNNLYCLTMRYV 300
Query: 369 LRE------LQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVITLEGLFSSLT 422
+ ++ N++ + + ++ K I +AT ++S+ LE + LT
Sbjct: 301 IESSYIYEIFKQLNVTFETKHLFVQVLGKCI-DATVSDSKTLRAKHFG---LEKVLDILT 356
Query: 423 YFF---SRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSL-S 478
F S S S + YI+ N LS WC +P+ K++ + + +
Sbjct: 357 VIFLDLSSGSSSNSQRYYKVIIYIETLIDYYSSNCCRILSYWCFSPSYSMKELIDQEVRA 416
Query: 479 IILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYK--- 535
+ILTSGTLSP+ S +E V F L+ PHVID Q+ +S GP LN+SY+
Sbjct: 417 VILTSGTLSPIESLVAEFQVSFPVQLQNPHVIDKK-QIWIGTVSKGPCGTALNSSYRNRS 475
Query: 536 ------------------TADG-------YKLMEKLCNRWRETGQWSRLNAKKPLFVEPK 570
DG Y +M W+ +G W R+ K L +EP+
Sbjct: 476 SAEYLSSLGNTIVNFARIIPDGLLVFFPSYPVMNSCIEHWQSSGIWDRICQHKSLHIEPQ 535
Query: 571 GGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVC 630
S+ F V+ YY+S+ + N GA FL VC
Sbjct: 536 HKSE--FNRVMDEYYSSV----------------------------RDENCSGAIFLGVC 565
Query: 631 RGK---------------IVVGIPFPNINDIQVSLKKKYNDT---YRSSKNLLSGNEWYC 672
RGK I+ G+PFP + +V LK +Y D ++ K++ G +WY
Sbjct: 566 RGKVSEGVDFADINGRAVIITGLPFPPSKEAKVMLKMQYLDENIGFKEHKSI-CGRDWYR 624
Query: 673 NQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEG 732
QA RA+NQAIGR IRHR DYGAIIL DERF ++ + + + KWL+ ++ Y SF + +
Sbjct: 625 QQASRAVNQAIGRVIRHRNDYGAIILCDERFNQKDSISQLPKWLKDYVQAYGSFGLTQKS 684
Query: 733 LKSFF 737
LK FF
Sbjct: 685 LKDFF 689
>gi|332025865|gb|EGI66021.1| Fanconi anemia group J protein-like protein [Acromyrmex echinatior]
Length = 653
Score = 296 bits (759), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 214/660 (32%), Positives = 330/660 (50%), Gaps = 101/660 (15%)
Query: 139 KKKMTPTIFYASRTHSQISQVISEYKKTAY-RVPMAVLASRKHYCTNKYVRDKENIDEEC 197
K K P IFY SRTH Q+ QV+ E+KKTAY M +L+SRK C + ++K D+ C
Sbjct: 23 KTKKVPKIFYGSRTHGQLEQVVKEFKKTAYSHKRMTILSSRKKTCIQETDKNK---DKLC 79
Query: 198 KLLLGDRNLG--CPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSM 255
LL R C + + + P++ DIEDLV++G+ V C Y+ AR +
Sbjct: 80 NELLDPRLKAKKCKYYND--DAKKKPTIF-SKMDTPWDIEDLVSLGKEVGTCPYFGARVL 136
Query: 256 ADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKL 315
DA+++FCPY+YI+ P IR +M+++++G I+ILDEAHNIE+I R+A +VDI +D LL
Sbjct: 137 MADAEIIFCPYNYILYPEIRDSMQINLRGNIVILDEAHNIENICREAATVDIRDDKLLIA 196
Query: 316 QMELEQVCSVN--PMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRELQ 373
E + ++ + Y + E DL+ ++ + R + W G REL
Sbjct: 197 VKECKHFLDMDYKSITYATIHEYLTDLIKFLNDIEVKDNDRN-EMVSKHWVG-AVFRELL 254
Query: 374 EAN-ISRQCFPILLECATKAIKEATDTESEL------PHLSGMSVITLEGLFSSLTYFFS 426
N I FP + + AI + E P +S S LE L + S
Sbjct: 255 NVNEIGCPRFPDFIAASKIAIDDFKQNMKEENSKKINPTISQESKKLLEYLCFGMQMIAS 314
Query: 427 RNGSHVSDYQLAL---QKYIKRDSKNPGGNWT------HTLSLWCLNPAVVFKDVAELSL 477
V DY++ + ++I++ ++N + T T+ L C+NPA+VF+ +A
Sbjct: 315 ---DKVDDYRMCIVETNEFIEKVTENDWFSTTKKLTKVRTMILKCMNPAIVFEPLAHEVR 371
Query: 478 SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTA 537
S+IL SGTL+P S+ SELG +F + H+I + Q+ I G PL A+Y
Sbjct: 372 SVILASGTLTPTVSYQSELGTKFSYIINPDHIIPKN-QLYIRYIPQGLSGKPLKATYDQV 430
Query: 538 D----------------------------GYKLMEKLCNRWRETGQWSRLNAKKPLFVEP 569
+ YK M + NRWR G W +L+ K +FVEP
Sbjct: 431 NTWAFQDELGNLILQVCDAVPFGVLCFFSSYKAMNTIHNRWRNNGIWDKLSNLKTIFVEP 490
Query: 570 KGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAV 629
K ++D V+K Y +RV E S++ +GA F AV
Sbjct: 491 K--YEKDLNPVMKAY---------------RRVIEES-------LSEQYQTVRGAIFFAV 526
Query: 630 CRGKIVVGIPFPN--------------INDIQVSLKKKYNDTYRS--SKNLLSGNEWYCN 673
R K+ GI F + + V++K +YN+ +S S+ LLSG+EWY
Sbjct: 527 FRAKVAEGIDFSDNEARCVLAIGIPYLLQSSDVTMKMEYNNLNKSNESRQLLSGSEWYTV 586
Query: 674 QAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGL 733
AFRALNQAIGRC+RH+ D+GA++L+D+RF+ ++N ++ KW++ +++ S+ +L+ L
Sbjct: 587 NAFRALNQAIGRCVRHKNDWGAVLLVDKRFELQQNINYLPKWVKTNVRLKISYIYNLQVL 646
>gi|307108093|gb|EFN56334.1| hypothetical protein CHLNCDRAFT_144794 [Chlorella variabilis]
Length = 1763
Score = 296 bits (759), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 261/863 (30%), Positives = 374/863 (43%), Gaps = 190/863 (22%)
Query: 22 GIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQN 81
G++VEFP++ Y QL +M +VI L Q HALLESPTGTGK+L LLC+TLAW+Q+
Sbjct: 283 GVEVEFPFEAYPCQLDYMTKVIQALQEGQ-----HALLESPTGTGKTLCLLCATLAWRQS 337
Query: 82 CKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKK 141
L Q SH P AV + AN Q S ST Q + A K
Sbjct: 338 --LTTQARPASH--PAAAAVGEVQAN--------QHS----STLVQGLREAWAEHRATKM 381
Query: 142 M-------TPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRD-KENI 193
P I Y+SRTHSQ+ QV+ E K +Y+ A +ASR+H C + V +
Sbjct: 382 AEGGPGSGLPQIVYSSRTHSQLQQVMRELKSCSYKPRTATVASRQHGCLHPVVSTMQAGA 441
Query: 194 DEECKLLLGDRNLGCPQFKNVHK-VRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAA 252
++ C+ L+ R C + V K VR +P EV DIEDL +G+ C YY A
Sbjct: 442 NQACRALVSKR--ACKWYNGVEKFVRQNPDANA----EVLDIEDLGRIGESRTVCPYYLA 495
Query: 253 RSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVL 312
R MA A +VF PY+Y+++ R + + + A+LI DEAHN+E + D+ S D+ L
Sbjct: 496 REMAATADIVFMPYNYLLDAKTRTGLGIAWQSAVLIFDEAHNVEQVCSDSMSFDLPAAAL 555
Query: 313 LKLQMELEQVCSVNPMIYQPLIEMTQDLVGW------------IERRKATLAK--REFQH 358
EL V I + +L G + R +A L + +E
Sbjct: 556 ASAIEELGTAAEVAANKGDAPINVFNELGGQDRNISLASVAAELHRARAVLCRLEQEVAG 615
Query: 359 FFSCWTGDKALRE--------------------LQEANISRQCFPILLECATKAIKEATD 398
+G+ A + L I+ Q + +L +C A+ T+
Sbjct: 616 LVKPGSGEAAWQHTPAAQRDAGLTRPGAFLFELLGRCGINSQTWRVLQQCLDTAMSVLTE 675
Query: 399 TESELPHLSG--MSVITLEGLFSSLTYFF--------------SRNGSHVSDYQLALQKY 442
E SG S L + +L F + +G Q LQ+
Sbjct: 676 EAVEAGRRSGSRASTYCLHQVAEALRLAFVGTAAGPEEPPPPLASSGGQWPPPQAVLQQL 735
Query: 443 IK----------------RDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSL-SIILTSGT 485
SKN G T TLS WC +P + + + ++ + SI+LTSGT
Sbjct: 736 AAPQVPASHAAYRVHVHLEKSKN--GRVTPTLSYWCFSPGLSMQQLTDMKVRSILLTSGT 793
Query: 486 LSPMNSFSSELGVQFGTCLEAPHVIDVDLQ--VLTSVISTGPDNYPLNASYKTAD--GYK 541
LSP++SF+ ELG+ F LE PHVI + V V+ TGP + LN+SY+ + Y+
Sbjct: 794 LSPLDSFAHELGLPFPIRLENPHVIAKEQASGVWVGVVPTGPSGHALNSSYQNRENAAYR 853
Query: 542 --LMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRK 599
L + L N R + P G L ++ S +Q C V
Sbjct: 854 SDLGQALVNFCR---------------IIPDG---------LLVFFTSYAQLQSC-VATW 888
Query: 600 KRVKREGNNDL---------NTIESQE----------------NANKKGASFLAVCRGK- 633
K+V G + IE +E N GA+F AV RGK
Sbjct: 889 KQVPSSGGPSIWERIAKSKQPVIEPRESAAFNAAALDFRAKLLNPAYNGAAFFAVTRGKL 948
Query: 634 --------------IVVGIPFPNINDIQVSLKKKYNDTYRSSKNL-------------LS 666
++ GIP+ +D +V LK++ + RS+ LS
Sbjct: 949 SEGLDFSDAAGRAVVLTGIPYAMRHDPKVRLKQEVLNEARSAPRKRGAAGGASAAPQGLS 1008
Query: 667 GNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSF 726
G++WY A RA+NQA+GR IRH DYGAIIL DERF+ + +S WLR + ++
Sbjct: 1009 GDQWYSQNAMRAVNQAVGRVIRHARDYGAIILCDERFKSPNVQRQLSCWLRGQVAVCPTY 1068
Query: 727 DASLEGLKSFFRDVKGWVGKKMF 749
A+ L FF+ +G V +K
Sbjct: 1069 GAANSSLVQFFKQ-QGAVARKAL 1090
>gi|326932020|ref|XP_003212120.1| PREDICTED: regulator of telomere elongation helicase 1-like
[Meleagris gallopavo]
Length = 1136
Score = 296 bits (757), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 251/897 (27%), Positives = 394/897 (43%), Gaps = 185/897 (20%)
Query: 55 CHALLESPTGTGKSLSLLCSTLAWQQNCKLKNQLANISHSKPDTEAVTD-PLANGGGFIP 113
+ +LESPTGTGK+L LLCSTLAW+++ K I+ E D P+++ G
Sbjct: 17 VNGILESPTGTGKTLCLLCSTLAWREHFKDTISARKIAQRMNGVELFPDRPMSSWGN--- 73
Query: 114 ESQPSTIPPSTNGQTAQVAMNNKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMA 173
+T+G + P I YASRTHSQ++QVI+E K T YR +
Sbjct: 74 --------AATDGDIPAYYTD--------IPKIIYASRTHSQLTQVINELKNTVYRPKVC 117
Query: 174 VLASRKHYCTNKYVRDKENIDEE---CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHE 230
VL SR+ C N V+ +E+ + C+ + R C + NV + S +KG
Sbjct: 118 VLGSREQLCINPEVKRQESNHMQIYMCRKKVMAR--ACHFYNNVEE----KSTEKGLMDS 171
Query: 231 VHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILD 290
+ DIEDLV G R C YY +RS+ A ++F PY+Y+++ R A +++KG ++I D
Sbjct: 172 IMDIEDLVKNGSKHRACPYYLSRSLKQQADIIFMPYNYLLDAKSRQAHNIELKGTVIIFD 231
Query: 291 EAHNIEDIARD-----------AGSVDIDEDVLLK----------------------LQM 317
EAHN+E + + A ++D+ VL + L M
Sbjct: 232 EAHNVERLCEESSSFDLTAYDLASAIDVINVVLEEQAKVVQQNEVNAEFNMESISSGLNM 291
Query: 318 ELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRELQEANI 377
ELE + + ++ Q +E D V + + + K G +A I
Sbjct: 292 ELEDIAKIKKILLQ--LESAIDAVE-LPPNDSGVTK----------DGSYIFELFAKAQI 338
Query: 378 SRQCFPILLECATKAIKEATDTESELPHLSGMSVIT--LEGLFS------SLTYFFSRNG 429
+ Q LLE + ++ + + SG+ ++ ++ +F+ + ++ ++
Sbjct: 339 TFQTKASLLESLEQILQFLSGRTGIFINTSGLHKLSDIIQTVFNIDLPEDTTSFLPPQSI 398
Query: 430 SHVSDYQLALQKYIKRDSKNPGGNWT--------HTLSLWCLNPAVVFKDVAELSL-SII 480
S + L ++ K W TLS WC +P ++ + +II
Sbjct: 399 SRYYKVHIHLDNSNQKKKKERTDLWDSSAAKKQGKTLSYWCFSPGYSMHELVRQGVRTII 458
Query: 481 LTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTA--- 537
LTSGTLSP++SF+ E+ + F LE PHVID Q+ +I GPD LN++Y+
Sbjct: 459 LTSGTLSPLSSFTMEMQIPFPVLLENPHVID-KRQLWVGIIPKGPDGTVLNSTYERRFSE 517
Query: 538 -------------------------DGYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGG 572
Y +M+K WRE R+ KP+FVEP+
Sbjct: 518 DYLSSLGKTIGNLVRVVPHGLLVFFPSYPVMDKSLEYWREHDFAKRIEEVKPMFVEPR-- 575
Query: 573 SQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRG 632
++ F V+ YY I+ C GA+FLAVCRG
Sbjct: 576 NKGSFAEVIDAYYGKIA----C------------------------PKSNGAAFLAVCRG 607
Query: 633 K---------------IVVGIPFPNINDIQVSLKKKY-NDTYRSS--KNLLSGNEWYCNQ 674
K I+ G+PFP + +V LK ++ N+ +SS LSG++WY Q
Sbjct: 608 KASEGLDFADMNGRGVIITGLPFPPRWEPRVVLKMQFLNEMKKSSMGAQYLSGHQWYNQQ 667
Query: 675 AFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLK 734
A RA+NQAIGR IRHR DYGAI L D+RF E R + W+R + YD+F ++ +
Sbjct: 668 ASRAVNQAIGRVIRHRQDYGAIFLCDDRFTTENVRGKLPSWVRPYVNVYDNFGHAVRSVS 727
Query: 735 SFFR---DVKGWVGKKMFNG--LENSDNDVDHVSSMDQCKEVTKQNTQELNKSDHSGQNV 789
FFR ++ + +G + S+NDV+ +S +Q + K + DH V
Sbjct: 728 VFFRVAQEIMPLPAAQCLSGSAVTLSENDVEPSTSSEQILSLQKAKILD----DH----V 779
Query: 790 QSISKYDPFSHQKSQGNFEVQTSLQTDQ---NNSCIEYIDLERMNDKNNHSIDSSKG 843
S+ + G + T + + CI +D N+KN+ ++ G
Sbjct: 780 PSLKRKRMVMPLNGGGASSLCTEYEQEMISPRRQCIGLLDALERNEKNSKEVEEDDG 836
>gi|307177078|gb|EFN66346.1| Fanconi anemia group J protein [Camponotus floridanus]
Length = 772
Score = 295 bits (756), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 216/677 (31%), Positives = 328/677 (48%), Gaps = 124/677 (18%)
Query: 136 KNVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVP-MAVLASRKHYCTNKYVRDKENID 194
+ K + P I+Y +RTH QI QV+ E KKT YR M +L+SR++ C K ++K +
Sbjct: 118 RKAKAQKVPKIYYGTRTHKQIQQVVRELKKTVYRDKRMTILSSRQYTCIQKSNKNK---N 174
Query: 195 EECKLLLGD-RNLGCPQFKNVHKVRG--HPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYA 251
E CK LL ++ C + + K R L+K DIEDL + G+ + C Y+
Sbjct: 175 ELCKELLDPLKSTKCLYYNDQSKKRMALFNELEKPW-----DIEDLFSFGKDIGICPYFG 229
Query: 252 ARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDV 311
ARS+ D A+++FCPY+YI++P IR +M++++KG I+ILDEAHNIED R+A SV+ D
Sbjct: 230 ARSLMDQAEIIFCPYNYIVDPHIRESMQINLKGDIVILDEAHNIEDTCREAASVNFRND- 288
Query: 312 LLKLQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAK----------REFQHFFS 361
+L++ + C+ Y+ + +D+ IE +AK + +
Sbjct: 289 --ELRIAADD-CTHWSRKYRNR-DRDRDIYTIIETYLTDIAKFLEAIDVKQNSNNEMVNN 344
Query: 362 CWTGDKALRELQEANISRQCFPILLECATKAI------KEATDTESELPHLSGMSVITLE 415
CW G + L L NI F + + AI K+ T + + +S + LE
Sbjct: 345 CWLGAEFLVLLDMNNIGSSKFSAFHDASKMAIQHYEEMKQETRPDKIVQAISQDTKRILE 404
Query: 416 GLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSK--NPGGNWTHT---------------- 457
L ++ S + V+DY++ + + ++ K P W T
Sbjct: 405 DLCFAIQMLTS--DTFVNDYRVCVIESMEPSKKIVIPENTWISTKKNFEFSFFKNKPLRI 462
Query: 458 LSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVL 517
+ L C+NPAVVF +A + S+I+ SGTL+P+ SF SELG +F + H+I D QV
Sbjct: 463 MKLLCMNPAVVFAPLARIVRSVIVASGTLTPITSFQSELGTKFPHVVNPDHIISKD-QVY 521
Query: 518 TSVISTGPDNYPLNASYKTADGYKL----------------------------MEKLCNR 549
I GP+ L A+++ + + M KL +R
Sbjct: 522 VRCIPRGPNGKTLMANFENVNSWNFQDELGSLVLQVCDAVPYGVLCFFSSYITMNKLHDR 581
Query: 550 WRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNND 609
WR TG WS+L K +FVEP+ S + +++ Y N I + S
Sbjct: 582 WRNTGTWSKLEKLKKIFVEPRNNS--NLPTMMEEYCNVIRESS----------------- 622
Query: 610 LNTIESQENANKKGASFLAVCRGKI---------------VVGIPFPNINDIQVSLKKKY 654
S+ GA F AV RGK+ VGIP+ N N +VS+K Y
Sbjct: 623 -----SKSFHVASGAIFFAVYRGKVAEGIDFSDNDARCVLAVGIPYRNKN--EVSMKMNY 675
Query: 655 NDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISK 714
ND+ + SK L G+EWY AFRALNQA+GRCIRH+ D+GA++L+DERFQ ++ K
Sbjct: 676 NDSNK-SKGFLPGSEWYTVDAFRALNQALGRCIRHKNDWGAVLLVDERFQNRHKINYLPK 734
Query: 715 WLRKSIKQYDSFDASLE 731
W++ ++D E
Sbjct: 735 WIKTKWMYDGNYDLQTE 751
>gi|403369956|gb|EJY84835.1| Isoform 4 of Regulator of telomere elongation helicase 1 [Oxytricha
trifallax]
Length = 1415
Score = 294 bits (753), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 244/854 (28%), Positives = 361/854 (42%), Gaps = 229/854 (26%)
Query: 18 YHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLA 77
+ G V FP++PY Q+ FM +VI L++ + +ALLESPTGTGK+LSLLC++LA
Sbjct: 280 FQTDGHTVYFPFKPYSCQVDFMSKVIKGLNQNE-----NALLESPTGTGKTLSLLCASLA 334
Query: 78 WQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKN 137
W KL+ + I Q+ V
Sbjct: 335 W---LKLQREKVGI-----------------------------------QSGDV------ 350
Query: 138 VKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEEC 197
P I Y SRTHSQ++QV E + TAY +L SR H C + E
Sbjct: 351 ------PRIIYTSRTHSQLAQVQKELRNTAYNPRSVILGSRDHLC----------VHPEI 394
Query: 198 KLLLGDR-NLGCPQFKN-----VHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYA 251
KLL G+ NL C + + + +L K E +DIE+L + + C Y+A
Sbjct: 395 KLLRGNALNLACQKAQKAIDPCIFGKNRDIALTKLSW-EPYDIEELHEIATKMIFCPYFA 453
Query: 252 ARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDV 311
++ A ++F PY+Y+I+ IR +++ KG+I+I DEAHN A D S +++ +
Sbjct: 454 SKDRMQGADVIFMPYNYLIDDKIRENFDINYKGSIIIFDEAHNASSTAEDVASFELNTKL 513
Query: 312 LLKLQMELEQV------------CSVNPMIYQPLIEMTQDLVGWIER------------- 346
L + + EL+++ N Q L+ MT+ +I+
Sbjct: 514 LEQSEFELQKLQDERRLRGDEFTFKSNDEDTQNLMYMTKKFREFIDNYELDQTQVKNFRV 573
Query: 347 ---------------------RKATLAKREFQ------------HFFSCW-----TGDKA 368
RK T EFQ + FS W D
Sbjct: 574 DKQYLKDASVVMPGREIFEIFRKGT----EFQCLDRVNQQSKMTNIFSEWGRWQQAFDNI 629
Query: 369 LRE---LQEANISRQ--CFPILLECATKAIKEATDTESELPHLSGMSVI--TLEGLFSSL 421
L + LQ+A Q + +++ ++ +++A + L G S T + +
Sbjct: 630 LNDIQTLQQATTKLQLDIWYDIVKRVSRLMRKAVQKKKNLEQNPGQSKAQETTDDVDDFY 689
Query: 422 TYFFSRNGSHVSDYQLALQKYIKRDSKNP--GGNWTHTLSLWCLNPAVVFKDVAEL-SLS 478
Y F + QL KR++++ NW LS WC N + F+++ EL S
Sbjct: 690 IYLFDEEDQQ--NDQLTFNMKKKRNNRDVFVQKNWMRKLSFWCFNAGIGFREIQELLPRS 747
Query: 479 IILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTAD 538
IILTSGTLSP+NSF +EL +QF LE PHVI + QV ++++ G N S+ D
Sbjct: 748 IILTSGTLSPLNSFQAELQIQFNQRLENPHVISPE-QVSINILTKGVRESLFNFSFNNRD 806
Query: 539 G----------------------------YKLMEKLCNRWRETGQWSRLNAKKPLFVEPK 570
Y++M++ W + K L++EPK
Sbjct: 807 NENTMVDLGMSIASIAQVTPGGMLVFFPSYRVMQRCEEVWNNQKVRQHIEKHKKLYMEPK 866
Query: 571 GGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVC 630
SQ ++ + YY SI + GA + VC
Sbjct: 867 DPSQ--YQTTMDLYYKSI------------------------FSPKPTDKTNGAILMGVC 900
Query: 631 RGKI---------------VVGIPFPNINDIQVSLKKKY-----NDTYRSSKNL---LSG 667
RG+I VVGIP+P + D +V LKK Y N R+ N LSG
Sbjct: 901 RGRISEGLDFSDNAARCVIVVGIPYPQMTDARVILKKDYLDKRLNQQSRNKNNQYPPLSG 960
Query: 668 NEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFD 727
+WY QA R++NQAIGR IRH DYG+IIL+DER+ R +SKWLR IK ++
Sbjct: 961 KDWYSQQATRSVNQAIGRVIRHVQDYGSIILIDERYNWGTMRGQVSKWLRDRIKLHNKCS 1020
Query: 728 ASLEGLKSFFRDVK 741
+KSFF ++K
Sbjct: 1021 DMQNEMKSFFEEMK 1034
>gi|320167785|gb|EFW44684.1| DEAH helicase isoform 6 [Capsaspora owczarzaki ATCC 30864]
Length = 1319
Score = 293 bits (751), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 241/853 (28%), Positives = 377/853 (44%), Gaps = 204/853 (23%)
Query: 17 AYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
++ + G+ VEFP+ PY QLV+M +VI L +ALLESPTGTGK+L LLC+ L
Sbjct: 6 SFTIRGVDVEFPFNPYDCQLVYMEQVIQCLQEG-----TNALLESPTGTGKTLCLLCAAL 60
Query: 77 AWQQNCKLKNQLANISH------------SKPDTEAVTDPLAN----------GGGFIPE 114
W+Q +QLA + + +P E V+ G F +
Sbjct: 61 GWRQAAVAAHQLAKLDNRYGGLTLPSGDQQQPGDELVSSEAKAAAFAAVGKSLAGNFADD 120
Query: 115 -----------SQPSTIPPSTNGQTAQVAMNNKNVKKKMTPTIFYASRTHSQISQVISEY 163
++P P + +G + P I Y+SRTHSQ++Q I E
Sbjct: 121 LSKRLGEASWSAKPGDKPSAVDGDSP-------------VPRIIYSSRTHSQLAQAIKEL 167
Query: 164 KKTAYRVPMAVLASRKHYCTNKYVRDKENID----EECKLLLGDRNLGCPQFKNVHKVRG 219
+ T+Y+ +++ SR+ C + V + +I C+ L+G + C + N+ + +
Sbjct: 168 QCTSYKPIASIIGSREQMCIHPEV-SQVHIQSVQVHNCRKLVGLHS--CSFYNNLERNK- 223
Query: 220 HPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAME 279
+ + ++V DIE LV V C YY +R + + +++F PY+Y+++P R A
Sbjct: 224 ---MSRDISNQVLDIEGLVEV------CPYYLSRQLQNRGEIIFMPYNYLLDPTARKAAN 274
Query: 280 VDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQVCSVNPMIYQPLIEMTQD 339
+++ +I+I DEAHN+E I D+ S + L + M + + S + ++
Sbjct: 275 LNLANSIIIFDEAHNLESICEDSASFQLTS---LDIAMAISEAQSCHDLVSD------AK 325
Query: 340 LVGWIE------------RRKATLAKREF--QHFFSCWTGDKALRELQEANISRQCFPIL 385
+G IE R ++ +A+ Q F+ G + N++ + F +
Sbjct: 326 YIGSIEPDDLLLLKKVLLRIESAIAETPLHPQDGFTAH-GTFIFDLFRSFNLTFETFSPV 384
Query: 386 LEC---ATKAIKEATDTESELPHLSGMSVITLEGLFSSL-TYFFSRNGSHVSDYQLALQK 441
LE +A+ EA T + + I+L L T F N ++ + +
Sbjct: 385 LELINSVIEALAEARGTRTS-------ASISLSKFADVLKTMFTEENKVNMDGIRKYYRC 437
Query: 442 YIKRDSKNP-------GGNWTH--------TLSLWCLNPAVVFKDVAELSL-SIILTSGT 485
+I +++ P G+ H TLS WC +P +D+ ++ + SIILTSGT
Sbjct: 438 HIGQEAAKPVTKASSGWGSTVHVAPSAAGRTLSFWCFSPGFAMRDLTKIGVRSIILTSGT 497
Query: 486 LSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKT--------- 536
LSP+ SF +E+ + F LE PHVI Q+ V+STGP N LN+S+KT
Sbjct: 498 LSPLASFGAEMQLPFPITLENPHVISKS-QLWCGVVSTGPSNCNLNSSFKTRSDESYLTD 556
Query: 537 ------------ADG-------YKLMEKLCNRWRETGQ------WSRLNAKKPLFVEPKG 571
DG Y +M + N W+ W L+ K +EP+
Sbjct: 557 LGSAIVNYARIVPDGLLVFFPSYSVMTQCINHWQNRSGTSAKNVWDMLHQHKHAVIEPR- 615
Query: 572 GSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCR 631
+ F + +Y A VR + +GA F AVCR
Sbjct: 616 -EKNLFPSAINEFY---------AKVRDPTI-------------------RGAVFFAVCR 646
Query: 632 GK---------------IVVGIPFPNINDIQVSLKKKYND-----TYRSSKNLLSGNEWY 671
GK I+ GIP+P ++D +V +KK+Y D +S ++G EWY
Sbjct: 647 GKVSEGLDFADMNGRAVIITGIPYPALHDPRVKIKKQYLDENKAENLKSGIAAINGIEWY 706
Query: 672 CNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLE 731
A RA+NQAIGR IRHR DYGAIIL D RF A + W+R +K +F SL
Sbjct: 707 NQTAARAVNQAIGRVIRHRSDYGAIILCDSRFAAPGTIAQLPLWVRPYVKTCKNFGDSLA 766
Query: 732 GLKSFFRDVKGWV 744
L FF+ K V
Sbjct: 767 QLAQFFKTAKADV 779
>gi|384485133|gb|EIE77313.1| hypothetical protein RO3G_02017 [Rhizopus delemar RA 99-880]
Length = 667
Score = 293 bits (750), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 187/568 (32%), Positives = 277/568 (48%), Gaps = 96/568 (16%)
Query: 144 PTIFYASRTHSQISQVISEYKK-TAYRVPMAVLASRKHYCTNKYVRDKENIDEECKLLLG 202
P I+ SRTH Q++Q+ISE K+ T Y M VL SR C + V N +E+C LL
Sbjct: 111 PRIYVGSRTHKQLTQLISELKRNTQYTPRMTVLGSRDQLCIHPKVSKSANKNEDCVNLLD 170
Query: 203 DRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLV 262
+ C KV H +LQ V DIED++++G+ VRGC YY +R++ + A++V
Sbjct: 171 KQ--ACGYAHRTKKVLAHSALQ--STLRVWDIEDMISLGKEVRGCPYYTSRNLFESAEVV 226
Query: 263 FCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQV 322
FCPY+YI++PVIR M +D++G+I+ILDEAHN+ED AR AGS ++D+ L +++EL Q+
Sbjct: 227 FCPYNYILDPVIRKVMNIDLEGSIVILDEAHNMEDAARSAGSFELDDRALSMVKIELTQI 286
Query: 323 CSVNPMI--YQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRELQEANISRQ 380
+ +Q L + L W+ +E++ W+G K + +L+E NI+
Sbjct: 287 IKSGFEVSAHQILEYLFDGLWEWVCSADNVYDIKEYERHICVWSGQKIIEKLKELNITAH 346
Query: 381 CF-----PILLECATKA-----------------IKEATDTESELP-H----LSGMSVIT 413
F P +T A KE D ++E+ H LS S+
Sbjct: 347 VFESQFVPAYRIASTHAETVRKESENRGLVDDNSEKEEKDNDAEVTVHRRKCLSNSSLNI 406
Query: 414 LEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGG-----------NWTHTLSLWC 462
++G+F Y F + + DY++AL K + R K G W + L WC
Sbjct: 407 VQGIFLIFGYLFREDSDYTEDYRMALMKRVDRGGKIYGAKKNNRKSTHDSTWAYKLGFWC 466
Query: 463 LNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVIS 522
LNP ++F+D+ + S+ILTSGTLSPM++F+SEL +F LEA HVID QV S +
Sbjct: 467 LNPGIIFQDMCAKTKSVILTSGTLSPMDTFASELDTKFSGKLEANHVIDPS-QVWVSCLP 525
Query: 523 TGPDNYPLNASYKTAD----------------------------GYKLMEKLCNRWRETG 554
GP+ L Y + Y ++KL RW TG
Sbjct: 526 VGPNGTYLKGVYSNMESFQYQDDIGEAICQIAETVPFGILCFLPSYNALDKLMERWALTG 585
Query: 555 QWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIE 614
R+ +KK + EPKG ++ FE + +Y+ I + N +
Sbjct: 586 IKERMESKKLILSEPKGSDKKVFEKAINRFYDHIDKAK------------------NYLA 627
Query: 615 SQENANKKGASFLAVCRGKIVVGIPFPN 642
+ K GA F AV RGK+ GI F N
Sbjct: 628 DE----KDGAIFFAVYRGKVSEGIDFTN 651
>gi|145354926|ref|XP_001421725.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581963|gb|ABP00019.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 749
Score = 293 bits (749), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 233/800 (29%), Positives = 362/800 (45%), Gaps = 147/800 (18%)
Query: 19 HVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
H V+FP++ Y +QLVFM + + + R + HALLESPTGTGK+L LL S LA+
Sbjct: 17 HKRAFTVDFPFEAYDNQLVFMEKALLAMCRGE-----HALLESPTGTGKTLCLLASALAF 71
Query: 79 QQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNV 138
+ S + + + +G G ++ T+G+ + + +
Sbjct: 72 VR-----------SEGRARKRKFREEVRDGRGGAGDADDVA---GTSGR--EFVDDVEKK 115
Query: 139 KKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE-- 196
++ P I YA+RTHSQ+ QV+ E K LASR+H C VR +++
Sbjct: 116 ERTRAPVIVYATRTHSQVDQVVRELKLFDSTTRATTLASRRHACARDDVRALNGTEQKNR 175
Query: 197 CKLLLGDRNLGCPQF--KNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARS 254
C L+ + G + + G L G V DIEDLV+ + C +Y AR+
Sbjct: 176 CAKLVQQQKCGAKVTLDRALQGRDGRFDLFSDG---VQDIEDLVSKAKARGPCPFYLART 232
Query: 255 MADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLK 314
+A+++F PY+Y+++ +R +E+ + A++I+DEAHN+E A D+ S + L K
Sbjct: 233 KCAEAEIIFMPYNYLLDESVRKGLEIAWENAVIIVDEAHNLESSASDSMSYSLTAAKLAK 292
Query: 315 LQMELEQVCSVN---------------------PMIYQPLIEMTQDLVGWIERRKATLAK 353
E E+ M+ L+++ + L+ I R A
Sbjct: 293 AIKESERAYETKLTLEDTSGEGIDAAAFKGEDFKMLTGVLVQL-EGLLDSICREAAKAPN 351
Query: 354 REFQHFFSCWTGDKALRE--LQEANISRQCF---PILLECATKAIKEATD-----TESEL 403
+ + GD A L E NI+ + L++ A++ ++ +D T++E
Sbjct: 352 AKHEGGLGERIGDGAFIYVILAELNITADTYEHITKLIKSASRTVQLGSDFMAQPTQNET 411
Query: 404 PHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCL 463
P + + I + YF +R G + ++ + R P TLS WC
Sbjct: 412 PLMEIGNFIERIFVHRYEQYFVTRLGPDMEKFKTS-----NRARAGP------TLSYWCF 460
Query: 464 NPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVIS 522
P + K + + + + +L SGTLSPM SF+SEL + F LE PHVI + QV V++
Sbjct: 461 FPGLCLKALIDKGVGTFLLASGTLSPMESFASELALDFPVRLENPHVIKRN-QVWGGVVT 519
Query: 523 TGPDNYPLNAS--------YKTADG--------------------YKLMEKLCNRWRETG 554
GP+N LN+S YKT G Y +M N WR TG
Sbjct: 520 HGPNNGVLNSSFRFRDTREYKTEIGSVILSTARIVPDGLLVFFPSYGVMHSCVNHWRSTG 579
Query: 555 QWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIE 614
W++L K VEP + ++F Y ++ + S
Sbjct: 580 LWNQLETNKTCLVEPS--NADEFHACYDSYNKALEEDS---------------------- 615
Query: 615 SQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKKYNDTYR 659
++GA+F AVCRGK I+ GIP+ D V K+ Y D +
Sbjct: 616 ------RRGAAFFAVCRGKLSEGIDFADKACRGVILTGIPYAGAKDPLVMHKRTYLDKRK 669
Query: 660 S-SKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRK 718
+ + SGNEWY A RA+NQA+GR IRH+ D+GA+IL DERF E R +S WLR
Sbjct: 670 ADNGGAYSGNEWYSQTAMRAVNQALGRVIRHKDDFGAVILADERFANENARNQLSLWLRP 729
Query: 719 SIKQYDSFDASLEGLKSFFR 738
S++ + F +++ GLK FF+
Sbjct: 730 SVQVHSVFHSAVHGLKEFFQ 749
>gi|323510681|ref|NP_116575.3| regulator of telomere elongation helicase 1 isoform 2 [Homo
sapiens]
Length = 1243
Score = 292 bits (748), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 245/837 (29%), Positives = 368/837 (43%), Gaps = 190/837 (22%)
Query: 22 GIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQN 81
G+ V+FP+QPY Q +M +V+ L + + +LESPTGTGK+L LLC+TLAW+++
Sbjct: 8 GVTVDFPFQPYKCQQEYMTKVLECLQQ-----KVNGILESPTGTGKTLCLLCTTLAWREH 62
Query: 82 CKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKK 141
+ IS K A G P+ S+ + +A
Sbjct: 63 LR-----DGISARKIAERAQ-------GELFPDRALSSWGNAAAAAGDPIACYTD----- 105
Query: 142 MTPTIFYASRTHSQISQVISEYKKTAYR------------VP------------MAVLAS 177
P I YASRTHSQ++QVI+E + T+YR P + VL S
Sbjct: 106 -IPKIIYASRTHSQLTQVINELRNTSYRSRCRATLWVLETAPPRPTVLSPTRPKVCVLGS 164
Query: 178 RKHYCTNKYVRDKENIDEE---CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDI 234
R+ C + V+ +E+ + C+ + R+ C + NV + SL++ + DI
Sbjct: 165 REQLCIHPEVKKQESNHLQIHLCRKKVASRS--CHFYNNVEEK----SLEQELASPILDI 218
Query: 235 EDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHN 294
EDLV G R C YY +R++ A ++F PY+Y+++ R A +D+KG ++I DEAHN
Sbjct: 219 EDLVKSGSKHRVCPYYLSRNLKQQADIIFMPYNYLLDAKSRRAHNIDLKGTVVIFDEAHN 278
Query: 295 IEDIARDAGSVDIDE----------DVLLKLQMELEQVCSVNPMIY----QPLIEMTQDL 340
+E + ++ S D+ D +L+ Q + Q +P P + M +
Sbjct: 279 VEKMCEESASFDLTPHDLASGLDVIDQVLEEQTKAAQQGEPHPEFSADSPSPGLNMELED 338
Query: 341 VGWIE----RRKATLAKREFQHFFSCWT--GDKALRELQEANISRQCFPILLECATKAIK 394
+ ++ R + + E S T G EA I+ Q +L+ + I+
Sbjct: 339 IAKLKMILLRLEGAIDAVELPGDDSGVTKPGSYIFELFAEAQITFQTKGCILDSLDQIIQ 398
Query: 395 EATDTESELPHLSGMSVI-----TLEGLFSSLTYFFSRN---GSHVSDYQL-ALQKYI-- 443
HL+G + + L+ L + FS + GS S L ALQ Y
Sbjct: 399 ----------HLAGRAGVFTNTAGLQKLADIIQIVFSVDPSEGSPGSPAGLGALQSYKVH 448
Query: 444 ------KRDSKNPGGNWTHT--------LSLWCLNPAVVFKDVAELSL-SIILTSGTLSP 488
R + W+ T LS WC +P ++ + S+ILTSGTL+P
Sbjct: 449 IHPDAGHRRTAQRSDAWSTTAARKRGKVLSYWCFSPGHSMHELVRQGVRSLILTSGTLAP 508
Query: 489 MNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTA----------- 537
++SF+ E+ + F CLE PH+ID Q+ V+ GPD L++++
Sbjct: 509 VSSFALEMQIPFPVCLENPHIIDKH-QIWVGVVPRGPDGAQLSSAFDRRFSEECLSSLGK 567
Query: 538 -----------------DGYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIV 580
Y +MEK WR ++ A KPLFVEP+ S+ F
Sbjct: 568 ALGNIARVVPYGLLIFFPSYPVMEKSLEFWRARDLARKMEALKPLFVEPR--SKGSFSET 625
Query: 581 LKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGK------- 633
+ YY RV G+ GA+FLAVCRGK
Sbjct: 626 ISAYY--------------ARVAAPGST--------------GATFLAVCRGKASEGLDF 657
Query: 634 --------IVVGIPFPNINDIQVSLKKKYNDTYR----SSKNLLSGNEWYCNQAFRALNQ 681
IV G+P+P D +V LK ++ D + + LSG EWY QA RA+NQ
Sbjct: 658 SDTNGRGVIVTGLPYPPRMDPRVVLKMQFLDEMKGQGGAGGQFLSGQEWYRQQASRAVNQ 717
Query: 682 AIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
AIGR IRHR DYGA+ L D RF RA + W+R ++ YD+F + + FFR
Sbjct: 718 AIGRVIRHRQDYGAVFLCDHRFAFADARAQLPSWVRPHVRVYDNFGHVIRDVAQFFR 774
>gi|426392491|ref|XP_004062583.1| PREDICTED: regulator of telomere elongation helicase 1 isoform 2
[Gorilla gorilla gorilla]
Length = 1244
Score = 292 bits (747), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 247/837 (29%), Positives = 371/837 (44%), Gaps = 190/837 (22%)
Query: 22 GIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQN 81
G+ V+FP+QPY Q +M +V+ L + + +LESPTGTGK+L LLC+TLAW+++
Sbjct: 8 GVTVDFPFQPYKCQQEYMTKVLECLQQ-----KVNGILESPTGTGKTLCLLCTTLAWREH 62
Query: 82 CKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKK 141
+ IS K A G P+ S+ G A A +
Sbjct: 63 LR-----DGISARKIAERAQ-------GELFPDRALSSW-----GNAAAAAGDAIACYTD 105
Query: 142 MTPTIFYASRTHSQISQVISEYKKTAYR------------VP------------MAVLAS 177
+ P I YASRTHSQ++QVI+E + T+YR P + VL S
Sbjct: 106 I-PKIIYASRTHSQLTQVINELRNTSYRSRCRATLWVLETAPPRPTVLSPTRPKVCVLGS 164
Query: 178 RKHYCTNKYVRDKENIDEE---CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDI 234
R+ C + V+ +E+ + C+ + R+ C + NV + SL++ + DI
Sbjct: 165 REQLCIHPEVKKQESNHIQIHLCRKKVASRS--CHFYNNVEEK----SLEQELASPILDI 218
Query: 235 EDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHN 294
EDLV G R C YY +R++ A ++F PY+Y+++ R A +D+KG ++I DEAHN
Sbjct: 219 EDLVKSGSKHRVCPYYLSRNLKQQADIIFMPYNYLLDAKSRRAHNIDLKGTVVIFDEAHN 278
Query: 295 IEDIARDAGSVDIDE----------DVLLKLQMELEQVCSVNPMIY----QPLIEMTQDL 340
+E + ++ S D+ D +L+ Q + Q +P P + M +
Sbjct: 279 VEKMCEESASFDLTPHDLASGLDVIDQVLEEQTKAAQQGERHPEFSADSPSPGLNMELED 338
Query: 341 VGWIE----RRKATLAKREFQHFFSCWT--GDKALRELQEANISRQCFPILLECATKAIK 394
+ ++ R + + E S T G EA I+ Q +L+ + I+
Sbjct: 339 IAKLKMILLRLEGAIDAVELPGDDSGVTKPGSYIFELFAEAQITFQTKGCILDSLDQIIQ 398
Query: 395 EATDTESELPHLSGMSVI-----TLEGLFSSLTYFFSRN---GSHVSDYQL-ALQKYI-- 443
HL+G + + L+ L + FS + GS S L ALQ Y
Sbjct: 399 ----------HLAGRAGVFTNTAGLQKLADIIQIVFSVDPSEGSPGSPAGLGALQSYKVH 448
Query: 444 ------KRDSKNPGGNWTHT--------LSLWCLNPAVVFKDVAELSL-SIILTSGTLSP 488
R + W+ T LS WC +P +++ + S+ILTSGTL+P
Sbjct: 449 IHPDAGHRRTAQRSDAWSTTAARKRGKVLSYWCFSPGHSMRELIRQGVRSLILTSGTLAP 508
Query: 489 MNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTA----------- 537
++SF+ E+ + F CLE PH+ID Q+ V+ GPD L++++
Sbjct: 509 VSSFALEMQIPFPVCLENPHIIDKH-QIWVGVVPRGPDGAQLSSAFDRRFSEECLSSLGK 567
Query: 538 -----------------DGYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIV 580
Y +MEK WR ++ A KPLFVEP+ S+ F
Sbjct: 568 ALGNIARVVPYGLLIFFPSYPVMEKSLEFWRARDLARKMEALKPLFVEPR--SKGSFSET 625
Query: 581 LKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGK------- 633
+ YY RV G+ GA+FLAVCRGK
Sbjct: 626 ISAYY--------------ARVAAPGST--------------GATFLAVCRGKASEGLDF 657
Query: 634 --------IVVGIPFPNINDIQVSLKKKYNDTYR----SSKNLLSGNEWYCNQAFRALNQ 681
IV G+P+P D +V LK ++ D + + LSG EWY QA RA+NQ
Sbjct: 658 SDTNGRGVIVTGLPYPPRMDPRVVLKMQFLDEMKGQGGAGGQFLSGQEWYRQQASRAVNQ 717
Query: 682 AIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
AIGR IRHR DYGA+ L D RF RA + W+R ++ YD+F + + FFR
Sbjct: 718 AIGRVIRHRQDYGAVFLCDHRFAFADARAQLPSWVRPHVRVYDNFGHVIRDVAQFFR 774
>gi|384253151|gb|EIE26626.1| DNA repair helicase [Coccomyxa subellipsoidea C-169]
Length = 812
Score = 292 bits (747), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 239/782 (30%), Positives = 359/782 (45%), Gaps = 117/782 (14%)
Query: 18 YHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLA 77
Y + GI+V+FP++ Y Q+ +M RVI+ L + +ALLESPTGTGK+L LLC+TLA
Sbjct: 4 YSIRGIEVQFPHEAYECQVTYMERVITALQEGK-----NALLESPTGTGKTLCLLCATLA 58
Query: 78 WQQNCK----LKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAM 133
WQ++ K K +ISH+K + +TD L +G
Sbjct: 59 WQESLKQGKVTKKMHNHISHTK-KSFGLTD-LRSG------------------------- 91
Query: 134 NNKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKEN- 192
TPTI YASRTHSQ++Q + + R A+L SR+ C N V+
Sbjct: 92 -----DLSATPTIIYASRTHSQLAQTLWRW----CRPRAAILGSRQQMCLNPGVKRLPGG 142
Query: 193 -IDEECKLLLGDRNLGCPQFKNVHK-VRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYY 250
+++ C+ + R C + V R HP E DIE+LV +G C +Y
Sbjct: 143 AMNQACRAHVSSRT--CSWYNKVESWTRMHPDANG----EALDIEELVRLGSSGGPCPFY 196
Query: 251 AARSMADDAQLVFCPYSYIINPVIRGAME-VDIKGAILILDEAHNIEDIARDAGSVDIDE 309
+R MA AQ+VF PY+Y+++ IRG ++ + A+L+ DEAHN+E + DA S D+
Sbjct: 197 LSRDMASTAQIVFMPYNYLVDAKIRGGIKMLSWDNAVLVFDEAHNVEGVCSDAASFDLTG 256
Query: 310 DVLLKLQMELEQVCSVNPMIYQPLIEMTQDL------VGWIERRKATLAKREFQHFFSCW 363
+L +++ V + ++ QDL + +E A+LA + ++
Sbjct: 257 ALLGTALQDVQAAVEVALLKRDGEAQLIQDLRMLGALLSKLEGAIASLAASAGNNGYTA- 315
Query: 364 TGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVITLEGLFSSLTY 423
G+ L + ++ + +A + +E + ++ LF LT+
Sbjct: 316 KGEFLFELLAKIGLNTDNHFYMERLLDEAADLLSGAAAEQGRRWAPQFLQIDELFL-LTF 374
Query: 424 FFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLS-IILT 482
+ S++ Y + + K + G TLS WC P V + L + I+LT
Sbjct: 375 YCSKSVFASQGYAICCL-FWKSKWAHGCGQEVPTLSYWCFEPGVAMAALCALKVRCILLT 433
Query: 483 SGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTADGYKL 542
SGTL+P++SF+ EL + F LE PHV++ QV V+ GP LN+SY T
Sbjct: 434 SGTLAPLDSFAQELSLDFPVTLENPHVVNTS-QVWVGVVPVGPKGVVLNSSYATRTSPAY 492
Query: 543 MEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHY-YNSISQGS--------- 592
ME L W+R+ L S E L+H+ NS Q
Sbjct: 493 MEDLG---LALANWARIVPDGLLVFF---ASYTVLEACLRHWKANSGDQRGGVLGFNGTL 546
Query: 593 -------KCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGK------------ 633
K AV+ +R + + ++ + +GA F AVCRGK
Sbjct: 547 WDRIVRDKQAVIEPRRSEEFQAAADDYRAKLKDPSSRGAIFFAVCRGKVSEGLDFSDRAG 606
Query: 634 ---IVVGIPFPNINDIQVSLKKKYNDTYRSSKNL-------------LSGNEWYCNQAFR 677
++ G+PF + D +V LKK+ D R S L+G WY QA R
Sbjct: 607 RAVVITGLPFAMVTDPKVRLKKEVLDETRRSAGAAKRTRDGAAPALRLTGEAWYSQQATR 666
Query: 678 ALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFF 737
A+NQA+GR IRH DYGAIIL DERF+ E N+ +SKWLR K + +F + L+ FF
Sbjct: 667 AVNQAMGRVIRHMHDYGAIILADERFKSETNQRQLSKWLRPLSKTHTNFGEAAASLQRFF 726
Query: 738 RD 739
D
Sbjct: 727 AD 728
>gi|397477198|ref|XP_003809965.1| PREDICTED: regulator of telomere elongation helicase 1 isoform 1
[Pan paniscus]
Length = 1090
Score = 292 bits (747), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 243/837 (29%), Positives = 367/837 (43%), Gaps = 190/837 (22%)
Query: 22 GIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQN 81
G+ V+FP+QPY Q +M +V+ L + + +LESPTGTGK+L LLC+TLAW+++
Sbjct: 8 GVTVDFPFQPYKCQQEYMTKVLECLQQ-----KVNGILESPTGTGKTLCLLCTTLAWREH 62
Query: 82 CKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKK 141
+ I+ + E D + G + I T+
Sbjct: 63 LRDGISARKIAE-RAQGEVFPDRALSSWGNAAAAAGDPIACYTD---------------- 105
Query: 142 MTPTIFYASRTHSQISQVISEYKKTAYR------------VP------------MAVLAS 177
P I YASRTHSQ++QVI+E + T+YR P + VL S
Sbjct: 106 -IPKIIYASRTHSQLTQVINELRNTSYRSRCRATLWVLETAPPRPTVLSPTRPKVCVLGS 164
Query: 178 RKHYCTNKYVRDKENID---EECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDI 234
R+ C + V+ +E+ C+ + R+ C + NV + SL++ + DI
Sbjct: 165 REQLCIHPEVKKQESNHLQIHSCRKKVASRS--CHFYNNVEEK----SLEQELASPILDI 218
Query: 235 EDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHN 294
EDLV G R C YY +R++ A ++F PY+Y+++ R A +D+KG ++I DEAHN
Sbjct: 219 EDLVKSGSKHRVCPYYLSRNLKQQADIIFMPYNYLLDAKSRRAHNIDLKGTVVIFDEAHN 278
Query: 295 IEDIARDAGSVDIDE----------DVLLKLQMELEQVCSVNPMIY----QPLIEMTQDL 340
+E + ++ S D+ D +L+ Q + Q +P P + M +
Sbjct: 279 VEKMCEESASFDLTPHDLASGLDVIDQVLEEQTKAAQQGEPHPEFSTDSPSPGLNMELED 338
Query: 341 VGWIE----RRKATLAKREFQHFFSCWT--GDKALRELQEANISRQCFPILLECATKAIK 394
+ ++ R + + E S T G EA I+ Q +L+ + I+
Sbjct: 339 IAKLKMILLRLEGAIDAVELPGDDSGVTKPGSYIFELFAEAQITFQTKGCILDSLDQIIQ 398
Query: 395 EATDTESELPHLSGMSVI-----TLEGLFSSLTYFFSRN---GSHVSDYQL-ALQKYI-- 443
HL+G + + L+ L + FS + GS S L ALQ Y
Sbjct: 399 ----------HLAGRAGVFTNTAGLQKLADIIQIVFSVDPSEGSPGSPAGLGALQSYKVH 448
Query: 444 ------KRDSKNPGGNWTHT--------LSLWCLNPAVVFKDVAELSL-SIILTSGTLSP 488
R + W+ T LS WC +P +++ + S+ILTSGTL+P
Sbjct: 449 IHPDAGHRRTAQRSDAWSTTAARKRGKVLSYWCFSPGHSMRELLRQGVRSLILTSGTLAP 508
Query: 489 MNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTA----------- 537
++SF+ E+ + F CLE PH+ID Q+ V+ GPD L++++
Sbjct: 509 VSSFALEMQIPFPVCLENPHIIDKH-QIWVGVVPRGPDGAQLSSAFDRRFSEECLSSLGK 567
Query: 538 -----------------DGYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIV 580
Y +MEK WR ++ A KPLFVEP+ S+ F
Sbjct: 568 ALGNIARVVPYGLLIFFPSYPVMEKSLEFWRARDLARKMEALKPLFVEPR--SKGGFSET 625
Query: 581 LKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGK------- 633
+ YY RV G+ GA+FLAVCRGK
Sbjct: 626 ISAYY--------------ARVAAPGST--------------GATFLAVCRGKASEGLDF 657
Query: 634 --------IVVGIPFPNINDIQVSLKKKYNDTYR----SSKNLLSGNEWYCNQAFRALNQ 681
IV G+P+P D +V LK ++ D + + LSG EWY QA RA+NQ
Sbjct: 658 SDTNGRGVIVTGLPYPPRMDPRVVLKMQFLDEMKGQGGAGGQFLSGQEWYRQQASRAVNQ 717
Query: 682 AIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
AIGR IRHR DYGA+ L D RF RA + W+R ++ YD+F + + FFR
Sbjct: 718 AIGRVIRHRQDYGAVFLCDHRFAFADARAQLPSWVRPHVRVYDNFGHVIRDVAQFFR 774
>gi|441639260|ref|XP_004090200.1| PREDICTED: LOW QUALITY PROTEIN: regulator of telomere elongation
helicase 1 [Nomascus leucogenys]
Length = 1342
Score = 291 bits (744), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 245/837 (29%), Positives = 376/837 (44%), Gaps = 190/837 (22%)
Query: 22 GIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQN 81
G+ ++FP+QPY Q +M +V+ L + + +LESPTGTGK+L LLC+TLAW+++
Sbjct: 8 GVTIDFPFQPYKCQQEYMTKVLECLQQ-----KVNGILESPTGTGKTLCLLCTTLAWREH 62
Query: 82 CKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKK 141
L++ ++ ++ E V G P+ S+ G A A +
Sbjct: 63 --LRDGIS----ARKIAERVQ------GELFPDRALSSW-----GNAAAAAGDPIGXYTD 105
Query: 142 MTPTIFYASRTHSQISQVISEYKKTAYR------------VP------------MAVLAS 177
+ P I YASRTHSQ++QVI+E + T+YR P + VL S
Sbjct: 106 I-PKIIYASRTHSQLTQVINELRNTSYRSHCGTTLWLLETAPPGPTVLSPTRPKVCVLGS 164
Query: 178 RKHYCTNKYVRDKENIDEE---CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDI 234
R+ C + V+ +E+ + C+ + R+ C + NV + L++ + DI
Sbjct: 165 REQLCIHPEVKKQESNHIQIHLCRKKVASRS--CHFYNNVEEK----GLEQELASPILDI 218
Query: 235 EDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHN 294
EDLV G R C YY +R++ A ++F PY+Y+++ R A +D+KG ++I DEAHN
Sbjct: 219 EDLVKNGSKHRVCPYYLSRNLKQQADIIFMPYNYLLDAKSRRAHNIDLKGTVVIFDEAHN 278
Query: 295 IEDIARDAGSVDIDE----------DVLLKLQMELEQVCSVNPMIY----QPLIEMTQDL 340
+E + ++ S D+ D +L+ Q ++ Q +P P + M +
Sbjct: 279 VEKMCEESASFDLTPHDLASGLDVIDQVLEEQTKMAQQGKPHPEFSADSPSPGLNMELED 338
Query: 341 VGWIE----RRKATLAKREFQHFFSCWT--GDKALRELQEANISRQCFPILLECATKAIK 394
+ ++ R + + E S T G EA I+ Q +L+ + I+
Sbjct: 339 IAKLKMILLRLEGAIDAVELPGDDSGVTKPGSYIFELFAEAQITFQTKGCILDSLDQIIQ 398
Query: 395 EATDTESELPHLSGMSVI-----TLEGLFSSLTYFFSRN---GSHVSDYQL-ALQKY--- 442
HL+G + + L+ L + FS + G S L ALQ Y
Sbjct: 399 ----------HLAGRAGVFTNTAGLQKLADIIQIVFSVDPSEGGPGSPAGLGALQSYKVH 448
Query: 443 IKRDSKNPGGN-----WTHT--------LSLWCLNPAVVFKDVAELSL-SIILTSGTLSP 488
I D+ + N W+ T LS WC +P +++ + S+ILTSGTL+P
Sbjct: 449 IHPDAGHRRTNQRSDAWSTTAARKRGKVLSYWCFSPGHSMRELVRQGVRSLILTSGTLAP 508
Query: 489 MNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTA----------- 537
++SF+ E+ + F CLE PH+ID Q+ V+ GPD L++++
Sbjct: 509 VSSFALEMQIPFPVCLENPHIIDKH-QIWVGVVPRGPDGAQLSSAFDRRFSEECLSSLGK 567
Query: 538 -----------------DGYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIV 580
Y +MEK WR ++ A KPLFVEP+ S+ F
Sbjct: 568 ALGNIARVVPCGLLIFFPSYPVMEKSLEFWRARDLARKMEALKPLFVEPR--SKGSFSET 625
Query: 581 LKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGK------- 633
+ YY RV G+ GA+FLAVCRGK
Sbjct: 626 ISAYY--------------ARVAAPGST--------------GATFLAVCRGKASEGLDF 657
Query: 634 --------IVVGIPFPNINDIQVSLKKKYNDTYR----SSKNLLSGNEWYCNQAFRALNQ 681
IV G+P+P D + LK ++ D + + LSG EWY QA RA+NQ
Sbjct: 658 SDTNGRGVIVTGLPYPPRMDHRXVLKMQFLDEMKGQGGAGGQFLSGQEWYRQQASRAVNQ 717
Query: 682 AIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
AIGR IRHR DYGA+ L D RF RA + W+R I+ YD+F + + FFR
Sbjct: 718 AIGRVIRHRQDYGAVFLCDHRFAFADARAQLPSWVRPHIRVYDNFGHVIRDVAQFFR 774
>gi|194379638|dbj|BAG63785.1| unnamed protein product [Homo sapiens]
Length = 1243
Score = 290 bits (742), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 244/837 (29%), Positives = 367/837 (43%), Gaps = 190/837 (22%)
Query: 22 GIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQN 81
G+ V+FP+QPY Q +M +V+ L + + +L SPTGTGK+L LLC+TLAW+++
Sbjct: 8 GVTVDFPFQPYKCQQEYMTKVLECLQQ-----KVNGILGSPTGTGKTLCLLCTTLAWREH 62
Query: 82 CKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKK 141
+ IS K A G P+ S+ + +A
Sbjct: 63 LR-----DGISARKIAERAQ-------GELFPDRALSSWGNAAAAAGDPIACYTD----- 105
Query: 142 MTPTIFYASRTHSQISQVISEYKKTAYR------------VP------------MAVLAS 177
P I YASRTHSQ++QVI+E + T+YR P + VL S
Sbjct: 106 -IPKIIYASRTHSQLTQVINELRNTSYRSRCRATLWVLETAPPRPTVLSPTRPKVCVLGS 164
Query: 178 RKHYCTNKYVRDKENIDEE---CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDI 234
R+ C + V+ +E+ + C+ + R+ C + NV + SL++ + DI
Sbjct: 165 REQLCIHPEVKKQESNHLQIHLCRKKVASRS--CHFYNNVEEK----SLEQELASPILDI 218
Query: 235 EDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHN 294
EDLV G R C YY +R++ A ++F PY+Y+++ R A +D+KG ++I DEAHN
Sbjct: 219 EDLVKSGSKHRVCPYYLSRNLKQQADIIFMPYNYLLDAKSRRAHNIDLKGTVVIFDEAHN 278
Query: 295 IEDIARDAGSVDIDE----------DVLLKLQMELEQVCSVNPMIY----QPLIEMTQDL 340
+E + ++ S D+ D +L+ Q + Q +P P + M +
Sbjct: 279 VEKMCEESASFDLTPHDLASGLDVIDQVLEEQTKAAQQGEPHPEFSADSPSPGLNMELED 338
Query: 341 VGWIE----RRKATLAKREFQHFFSCWT--GDKALRELQEANISRQCFPILLECATKAIK 394
+ ++ R + + E S T G EA I+ Q +L+ + I+
Sbjct: 339 IAKLKMILLRLEGAIDAVELPGDDSGVTKPGSYIFELFAEAQITFQTKGCILDSLDQIIQ 398
Query: 395 EATDTESELPHLSGMSVI-----TLEGLFSSLTYFFSRN---GSHVSDYQL-ALQKYI-- 443
HL+G + + L+ L + FS + GS S L ALQ Y
Sbjct: 399 ----------HLAGRAGVFTNTAGLQKLADIIQIVFSVDPSEGSPGSPAGLGALQSYKVH 448
Query: 444 ------KRDSKNPGGNWTHT--------LSLWCLNPAVVFKDVAELSL-SIILTSGTLSP 488
R + W+ T LS WC +P ++ + S+ILTSGTL+P
Sbjct: 449 IHPDAGHRRTAQRSDAWSTTAARKRGKVLSYWCFSPGHSMHELVRQGVRSLILTSGTLAP 508
Query: 489 MNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTA----------- 537
++SF+ E+ + F CLE PH+ID Q+ V+ GPD L++++
Sbjct: 509 VSSFALEMQIPFPVCLENPHIIDKH-QIWVGVVPRGPDGAQLSSAFDRRFSEECLSSLGK 567
Query: 538 -----------------DGYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIV 580
Y +MEK WR ++ A KPLFVEP+ S+ F
Sbjct: 568 ALGNIARVVPYGLLIFFPSYPVMEKSLEFWRARDLARKMEALKPLFVEPR--SKGSFSET 625
Query: 581 LKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGK------- 633
+ YY RV G+ GA+FLAVCRGK
Sbjct: 626 ISAYY--------------ARVAAPGST--------------GATFLAVCRGKASEGLDF 657
Query: 634 --------IVVGIPFPNINDIQVSLKKKYNDTYR----SSKNLLSGNEWYCNQAFRALNQ 681
IV G+P+P D +V LK ++ D + + LSG EWY QA RA+NQ
Sbjct: 658 SDTNGRGVIVTGLPYPPRMDPRVVLKMQFLDEMKGQGGAGGQFLSGQEWYRQQASRAVNQ 717
Query: 682 AIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
AIGR IRHR DYGA+ L D RF RA + W+R ++ YD+F + + FFR
Sbjct: 718 AIGRVIRHRQDYGAVFLCDHRFAFADARAQLPSWVRPHVRVYDNFGHVIRDVAQFFR 774
>gi|429962084|gb|ELA41628.1| hypothetical protein VICG_01376 [Vittaforma corneae ATCC 50505]
Length = 657
Score = 286 bits (733), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 218/741 (29%), Positives = 343/741 (46%), Gaps = 126/741 (17%)
Query: 22 GIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQN 81
GI VE PY+PY QLV + ++I + +AL+ESPTGTGKSLS+LCS LA+ +
Sbjct: 8 GIPVEIPYEPYPPQLVTISKLIECFQT-----NTNALIESPTGTGKSLSILCSVLAFYEQ 62
Query: 82 CKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKK 141
K + N +N K
Sbjct: 63 EKRR-----------------------------------------------FNEQNKPFK 75
Query: 142 MTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEECKLLL 201
IF SRTH QI Q+I + +KT YR + VL S+ YC N + E+ + C L+
Sbjct: 76 ----IFICSRTHKQIDQLIDQLRKTIYRPRITVLGSKNQYCINSTLSKVEDKNTACAELI 131
Query: 202 GDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQL 261
+ C F G L K ++ DIE+L G+ GC Y+ AR + +DA +
Sbjct: 132 KKK--ACVYFN------GKDRLIKRIGEKIFDIEELKREGKKCAGCPYFTARELQEDADI 183
Query: 262 VFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQ 321
+F PY+Y+I+ +R + E+ + AILI+DEAHNIED R AGSV+I ++ + EL
Sbjct: 184 IFAPYNYLIDTSVRESSEIKLDNAILIIDEAHNIEDCCRSAGSVEITSKLIEIVINELIG 243
Query: 322 VCSVNPMI------YQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRELQEA 375
+ ++ + L+++ + L + + + +E Q G + + EL +
Sbjct: 244 AIKRSALLGEVRGEFLSLMDIFRKLKDHSQTNEFDVKGKENQ--MKIRKGKEVIEELDKM 301
Query: 376 NISRQCFPILLECATKAIKEATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDY 435
+ ++ F + + + +AI + D +S L + + +E + + + GS Y
Sbjct: 302 GVGKEAF-LSYKNSLQAIMKNEDAKSLLSLNTSRFLQEMERILGMVLF----TGSEA--Y 354
Query: 436 QLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSE 495
KY K+ G ++ +LW L+P+V+F + SI L SGTL+P +SF SE
Sbjct: 355 AYCFTKY-----KDEG----YSYNLWLLDPSVMFLPLVSKIKSISLLSGTLTPFSSFCSE 405
Query: 496 LGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTADGYKLMEKLCNRWRETG- 554
L QF L APH+I + QV + I G L +Y TA+ ++++ +
Sbjct: 406 LKFQFQHKLVAPHIIRTE-QVFVASIRKGHLKQDLCGTYSTAETVAYLDQVSKIVVDIAL 464
Query: 555 -------------QWSRLNAKK----PLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVV 597
+S LN VEPK G +FE ++ Y I + + +
Sbjct: 465 HVKNEGGTLVFVPSYSFLNKLAGRISGAIVEPKDGGMVEFEKAIEAYKQRIQKKATSIFI 524
Query: 598 RKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYNDT 657
R K D S R + +GIP+P+I D Q+ LKK+YND
Sbjct: 525 CVYRGKASEGVDFRDEYS---------------RAVVAIGIPYPSIRDPQIGLKKEYNDK 569
Query: 658 YRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLR 717
+G WY QAFRALNQA+GR IRH D+G++ L+D R+ E+R ++ + W+
Sbjct: 570 TSG----YNGRLWYEAQAFRALNQALGRSIRHSNDWGSVFLIDSRYGEKRYQSGLPSWIV 625
Query: 718 KSIKQYDSFDASLEGLKSFFR 738
+IK ++++ S+E KSF +
Sbjct: 626 SNIKIFETYSQSVESFKSFIK 646
>gi|391338586|ref|XP_003743639.1| PREDICTED: LOW QUALITY PROTEIN: regulator of telomere elongation
helicase 1 homolog [Metaseiulus occidentalis]
Length = 1132
Score = 286 bits (733), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 238/808 (29%), Positives = 361/808 (44%), Gaps = 143/808 (17%)
Query: 1 MVSEANPN---PNYRKPLNAY-HVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCH 56
M + +P+ P KP +A + + + FP++PY Q +M V+ L + +
Sbjct: 1 MSEDGDPDEDAPVSSKPRSALVEIRMVNISFPFEPYELQKDYMSAVLECLQKG-----WN 55
Query: 57 ALLESPTGTGKSLSLLCSTLAWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQ 116
LLESPTGTGK+LSLLCS+LAW ++ K QL S A + + + +P+
Sbjct: 56 GLLESPTGTGKTLSLLCSSLAWLEDRKAAMQLNCEFRSAQSXSAYRETVRS----LPKLS 111
Query: 117 PSTIPPSTNGQTAQVAMNNKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYR-VPMAVL 175
+ P T+ P + Y+SRTHSQ+SQ E K+T YR + VL
Sbjct: 112 AAETPTQTSSSF------------DFYPQVLYSSRTHSQLSQASRELKRTKYRYMNSVVL 159
Query: 176 ASRKHYCTNKYVRDKENIDEE---CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVH 232
SR C N V N ++ C++L+ R C +N H + V
Sbjct: 160 GSRDQLCINPEVNGLPNSAQKIRKCQILVNSR--ACEYHRNYETKVSHEDFT---TNHVV 214
Query: 233 DIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEA 292
DIEDLV +G+ C YYA + + + +VF PY+Y+++P R A + ++ I+I DEA
Sbjct: 215 DIEDLVTLGKKHCCCPYYATKILRKKSDVVFVPYNYVVDPSTRRAQGIGLERNIVIFDEA 274
Query: 293 HNIEDIARDAGSVDIDEDVLLKLQMELEQVC--------SVNPMIYQPLIEMTQDLVGWI 344
HNIE D+ S + + E++ V + N + + + ++G +
Sbjct: 275 HNIESFCEDSLSFAMSSTDMAGAMKEIDAVAQNLANSEEADNMEFNVAELSVLKSMLGEL 334
Query: 345 ERRKATLAKREFQHFFSCWTGDKALRELQEANISRQCFPI--LLECATKAIKEATDTESE 402
E R A+ + +H+ GD + LQ + I Q I LL+ K I+ + S+
Sbjct: 335 ETRFDKAAETD-KHY----DGDFIVEMLQASEIDAQHERITGLLDSLLKYIQSIS---SQ 386
Query: 403 LPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWT------- 455
P G I L+ + L+ +S G + + + + + + + P +
Sbjct: 387 GPW--GPKGIGLQKVLDMLSTVYS--GGTAQELRESFKLFFEHPKEGPKEVFVVERKKKK 442
Query: 456 HTLSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVD- 513
L CL P V K + + + S+ILTSGTLSPM + ++ELG+ F L H+I D
Sbjct: 443 WELHFVCLAPGVRMKSIVQAGVHSVILTSGTLSPMGTLATELGIPFQIQLSNDHIITPDK 502
Query: 514 LQVLTSVISTGPDNYPLNASYKTADGYKL----------------------------MEK 545
+QVL + GPDN L ++Y+ K M+
Sbjct: 503 IQVL--CVPKGPDNVELISTYQNRSSEKYIRSLGLTLNEMSRRVPHGVLVFFPSFACMKA 560
Query: 546 LCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKRE 605
L +W E G RL A K L E G S +NS Q + AV+
Sbjct: 561 LVEKWEEFGIMRRLKAHKMLLQEEPGSSS----------FNSTIQCYRDAVIN------- 603
Query: 606 GNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSL 650
N +GA AVCRGK I+VGIP+ D +V L
Sbjct: 604 --------------NAQGAMLFAVCRGKSSEGVDFSDEFARAVIIVGIPYAPRQDNRVKL 649
Query: 651 KKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRA 710
K Y + Y S ++GN WY QA RA+NQAIGR IRHR D+G I+ LD+RF E+ +
Sbjct: 650 KIDYLNKYGSDG--MNGNTWYQIQAIRAINQAIGRVIRHRNDFGVILFLDKRFAEQGTIS 707
Query: 711 HISKWLRKSIKQYDSFDASLEGLKSFFR 738
+SKW+R + F ++ G+ SFF+
Sbjct: 708 QLSKWVRNRVDTLREFRKAIVGVSSFFQ 735
>gi|123505191|ref|XP_001328927.1| helicase [Trichomonas vaginalis G3]
gi|121911876|gb|EAY16704.1| helicase, putative [Trichomonas vaginalis G3]
Length = 884
Score = 285 bits (730), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 230/805 (28%), Positives = 379/805 (47%), Gaps = 135/805 (16%)
Query: 13 KPLNAYHVGGIQVEFPYQ-PYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSL 71
KP + + V GI+V FP++ PY +Q+ M VI ++ Q +A+LESPTGTGKS++L
Sbjct: 5 KPAHQFKVAGIEVPFPHEKPYAAQMALMAGVIKSMRTGQ-----NAILESPTGTGKSIAL 59
Query: 72 LCSTLAWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQ--------------- 116
L + LA+Q++ K N P T++ GF P +
Sbjct: 60 LSAALAFQKSQKEVNITPPGQIDPPITKSYL-------GFFPPMKLVHTDQEIFSPLLTQ 112
Query: 117 ---PSTIP-----PSTNGQTAQVAMNNKNVKKKMTPTIFYASRTHSQISQVISEYKKTAY 168
PS IP T G T + +K+ I+YA+RTH Q+ Q++ E KK +
Sbjct: 113 GLNPSEIPRYSEFEGTEGPT-DYTTDFYVKRKQHAGQIWYATRTHQQLKQLVKEMKKLPF 171
Query: 169 RVPMAVLASRKHYCTNKYVRDKENIDEECKLLLGDRNLGCPQFKNVHKVRGHP-SLQKGG 227
M ++ASR C N + ++ ++D C L +N GCP K +G P + G
Sbjct: 172 HPQMVIMASRAQVCVNPKIMNQSDVDGHCSDL--QKNGGCP----YDKKKGIPKEFKPNG 225
Query: 228 CHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAIL 287
+ +IEDL + + +GC Y+ +R M A +VFCPY+Y ++P I+G M++D+ G L
Sbjct: 226 ILDKFEIEDLKDWCRKNKGCPYFISRKMMMAADIVFCPYNYFLDPKIKGQMQLDLTGVYL 285
Query: 288 ILDEAHNIEDIARDAGSV-----DIDEDVL-LKLQMELEQVCSVNPMIYQPLIEMTQDLV 341
I+DEAHNIE+ RD GS D++ ++ L+ ++ + S+ + ++E+
Sbjct: 286 IIDEAHNIENSCRDGGSFHQSRKDLEWALMYLRKSIKKSDIPSLRKA-FMIVLELITKEY 344
Query: 342 GWIERRKATLAKREFQHFFSCWTGDKALRELQEANISR-----QCFPILLE-CATKAIKE 395
W L + + F +KA + N+S F + + C T +
Sbjct: 345 EWFTSTTKYLRLQGQKEFIV--RDNKAFYDSLRLNLSFYTKLVAAFDCIFKFCNTMNFPQ 402
Query: 396 ATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWT 455
++P + G ++ + + +LT + + +Y A+ + D N +
Sbjct: 403 IYQEADKIPMILG-GILEQQWVAIALTLKYD-----LRNYAFAI--VLGDDESN---DIF 451
Query: 456 HTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQ 515
H L C+NP VF + ++IL+SGTL+P+ F +E GV F L APHVI D Q
Sbjct: 452 HGL---CMNPGAVFHRPGTEASNVILSSGTLTPLEEFENEFGVPFPIRLSAPHVISPD-Q 507
Query: 516 VLTSVISTGPDNYPLNASYKTAD--------------------------------GYKLM 543
V+ I T DN L++ ++ + + +
Sbjct: 508 VVGFTI-TSCDNVTLSSRHQYLESQGMRNDVNLKLAEILLHILPVIPNGVLFFVTSHSFL 566
Query: 544 EKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVK 603
++ + W++ G + +++ K +F E E F+ Y S +GS V + R
Sbjct: 567 MRMLDAWQKAGLYEKIDKIKKIFYETPDSDPEFFD----KYKASCEEGSLLIGVFRGR-S 621
Query: 604 REGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYNDTYRSSKN 663
EG ++ ++ Q R IV GIPFP+ DI V LKK+YND Y++
Sbjct: 622 SEG---IDFVDEQ-------------ARAVIVFGIPFPSYYDIDVKLKKEYND-YKNQ-- 662
Query: 664 LLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQY 723
+GN WY QA+R+L QA+GRCIRH+ D+G++IL+D+R+ E +R KWL+ I+
Sbjct: 663 --TGNVWYDTQAYRSLFQALGRCIRHKNDFGSVILIDQRYPNELHR--FPKWLKTQIRND 718
Query: 724 DSFDASLEGLKSFFRDVKGWVGKKM 748
+ + L F++ +K +K+
Sbjct: 719 VGLNQIVTELSRFYQRMKEKFPRKI 743
>gi|328719600|ref|XP_001948918.2| PREDICTED: regulator of telomere elongation helicase 1 homolog
[Acyrthosiphon pisum]
Length = 946
Score = 284 bits (726), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 233/811 (28%), Positives = 369/811 (45%), Gaps = 162/811 (19%)
Query: 15 LNAYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCS 74
+ ++ G+ V+FPY+PY Q ++ +V+ L ++GH + +LESPTGTGK+LSLLCS
Sbjct: 1 MTSFECRGVLVDFPYEPYEVQKRYIEKVLECL----QNGH-NGVLESPTGTGKTLSLLCS 55
Query: 75 TLAWQQNCKLKNQLANISHSK--PDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVA 132
+LAW L + A I ++ P +T + G + P++ + NG
Sbjct: 56 SLAW-----LLAKKAAIQANRMCPTESNLTISINTAAGV--DKNPNS---AWNGVIR--- 102
Query: 133 MNNKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYR-VPMAVLASRKHYCTNKYVRDKE 191
P I Y SRTH+Q++QV+ E ++T Y+ + + ++ SR C + V +
Sbjct: 103 ----------PPRIIYGSRTHTQLNQVMKELRRTNYKHMKVGIIGSRDQLCIHPEVTKEA 152
Query: 192 NIDEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYA 251
+ L + QF N +++ + + G + DIEDLVN G+ C YY
Sbjct: 153 TSSVKIALCRAKVSTRTCQFYNNVELKSKDAFVENG---IADIEDLVNKGKKFNCCPYYG 209
Query: 252 ARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDE-- 309
+R + D ++F PY+YII+P R A ++ ++ILDE HN+E + ++ SVDI
Sbjct: 210 SRELQKDVDILFTPYNYIIDPRTRKAQDIQFSDDVIILDEGHNVEKMCEESCSVDISSTD 269
Query: 310 ---------DVLLKLQMELEQVCSVNPMIYQP-------------LIEMTQDLVGWIERR 347
D++ +L E S P+ +P L + ++ IE
Sbjct: 270 IALCIDAVTDIMKQLYDEKNTEFSTEPIQLKPREFSDDDICVLKALFLEIEKVIDGIELT 329
Query: 348 KATLAKREFQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLS 407
+T K+ G + LQ A+I+ + + + + S PH +
Sbjct: 330 NSTNDKK--------MEGSYIFKLLQGADITPSNMSKFISFLSSVTLYMSSSNSNAPHQA 381
Query: 408 GMSVIT-----LEGLFSSLTYFFSRNG------SHVSDY-QLALQKYI-KRDS-KNPGGN 453
+ + LE + SL NG + Y QL KY K DS K
Sbjct: 382 KEACLYKFQQFLECVLQSL----GTNGDPKNTDKYFRTYIQLEQSKYKPKNDSIKLKEFK 437
Query: 454 WTHTLSLWCLNPAVVFKDVAELSLS-IILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDV 512
TL+ WC +P +D+ + ++ IILTSGTLSP+ + SE+G+ L+ HVI
Sbjct: 438 KGKTLNFWCFSPGFGMRDLLDRNVRCIILTSGTLSPLAATISEIGIPVKVQLQNAHVIK- 496
Query: 513 DLQVLTSVISTGPDNYPL--------NASYKTADG--------------------YKLME 544
+ QV SVI +GP N PL N+ + T+ G Y ++
Sbjct: 497 NSQVCVSVIKSGPSNKPLICNYTSRNNSDFLTSLGQTLVNFSRIIPGGTLVFFPSYPFLD 556
Query: 545 KLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKR 604
+ N W+ W+ + K +FVEPK +++ V++ YY +I
Sbjct: 557 QCVNHWQGCNIWASITKNKSIFVEPK--NKDVLNSVIEEYYKAI---------------- 598
Query: 605 EGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVS 649
QEN KGA LAV RGK I++G+P+P D +V
Sbjct: 599 -----------QEN---KGAILLAVYRGKVSEGLDFSDWKARAVIILGLPYPPYQDPRVV 644
Query: 650 LKKKYNDTYR-SSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERN 708
+K++Y D R + LSG EWY +A +A+NQA+GR IRH D+G+II DER+
Sbjct: 645 MKREYLDEMRKENSQCLSGQEWYKLEAIKAVNQAMGRVIRHIGDWGSIIFCDERYASFNI 704
Query: 709 RAHISKWLRKSIKQYDSFDASLEGLKSFFRD 739
++ +S WL+ IK YD F + FF++
Sbjct: 705 KSQLSAWLQPHIKIYDQFSIAYRENMKFFKE 735
>gi|340374870|ref|XP_003385960.1| PREDICTED: regulator of telomere elongation helicase 1-like
[Amphimedon queenslandica]
Length = 717
Score = 282 bits (722), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 243/782 (31%), Positives = 358/782 (45%), Gaps = 181/782 (23%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ + V FP+ PY Q+ +M +VI L + +A+LESPTGTGK+LSLLC+TL+W+
Sbjct: 12 IENVPVSFPFTPYPCQIEYMEKVIKALQ-----NNTNAILESPTGTGKTLSLLCATLSWR 66
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVK 139
Q QL S+ D ++ D GG
Sbjct: 67 Q------QLPAPVISEWDLQS--DSKGPLGG----------------------------- 89
Query: 140 KKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE--- 196
P I YASRTHSQ+SQ I E K T+YR ++++ SR C N V K++ E+
Sbjct: 90 ---RPKIIYASRTHSQLSQAIHELKSTSYRPKVSIIGSRDQLCINSEVMSKDSNAEKVHA 146
Query: 197 CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMA 256
C + ++ C + NV R S+ +G + DIE+LV +G + C YY AR M
Sbjct: 147 CHAKVAAKS--CTYYNNVDLKR--LSVPEGF---IPDIEELVGMGTKNKMCPYYLAREMK 199
Query: 257 DDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDI--------- 307
+A L+F PY+YI++ R ++I ++ILDEAHNIE + D+ S ++
Sbjct: 200 TEADLIFMPYNYILDLRTRLVHGINITNTVVILDEAHNIERVCEDSSSFELTSTDIAHCI 259
Query: 308 -DEDVLLKLQME--LEQVCSVNPMIYQPLIEMT--QDLVGWIERRKATLAKREF--QHFF 360
D D LLK + E E + ++ L ++ ++L +E +L K E ++
Sbjct: 260 KDIDYLLKNKYEEAKEYLSELDTQTQNTLKDLANLKELFLCLED---SLDKIELKSENNE 316
Query: 361 SCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVITLEGLFSS 420
G L +A I+ + +L++ ++AI T +S H + + L+ +
Sbjct: 317 CVKPGSYIFEFLGKAGITTETHVVLIDQCSQAIASLTSDQS--LHRTSTN---LQKFLEA 371
Query: 421 LTYFFS----RNGSHVSDYQLALQKYIKRDS---KNPGGNWT---------HTLSLWCLN 464
+ FS + L + YIK D+ K WT L WC N
Sbjct: 372 IKIVFSGSCPAGMTRERMASLHYRVYIKSDNNKRKKKSDVWTTDNNTDDTCRRLCYWCFN 431
Query: 465 PAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVIST 523
P ++ + S+ILTSGTLSP+ SF+SEL ++F L+ HVI D QV V+S
Sbjct: 432 PGYAMTELVRQGVRSVILTSGTLSPLESFTSELQLEFPVSLQGSHVIGKD-QVWVGVVSK 490
Query: 524 GPDNYPLNASYKT---------------------ADG-------YKLMEKLCNRWRE-TG 554
GPDN LN+SY+T DG Y +ME L W+E +
Sbjct: 491 GPDNVHLNSSYQTRFTPAYMDSLGNTLVNFFRIIPDGVLVFFPSYVVMETLVTHWKEHSN 550
Query: 555 QWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIE 614
+ R+ K +F EPK + +F V+ YY I
Sbjct: 551 IFMRMEQHKQIFKEPK--FKNEFNSVMSAYYEKIG------------------------- 583
Query: 615 SQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKKYNDTYR 659
+A+K G +F VCRGK I+ G+P+P + +V LK +Y R
Sbjct: 584 ---SADKVGGAFFGVCRGKVSEGLDFADNNGRAVIITGLPYPPFAEPKVQLKMEYLKDAR 640
Query: 660 SSKN---LLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDER----FQEER---NR 709
S+ N L++ +WY QA RA+NQAIGR IRH+ DYGAIIL DER F + R N+
Sbjct: 641 SNFNRTELITDKQWYNQQATRAVNQAIGRVIRHKNDYGAIILCDERKLAWFVDVRISLNK 700
Query: 710 AH 711
AH
Sbjct: 701 AH 702
>gi|322792265|gb|EFZ16249.1| hypothetical protein SINV_00648 [Solenopsis invicta]
Length = 599
Score = 282 bits (722), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 198/650 (30%), Positives = 307/650 (47%), Gaps = 143/650 (22%)
Query: 139 KKKMTPTIFYASRTHSQISQVISEYKKTAYRVP-MAVLASRKHYCTNKYVRDKENIDEEC 197
+ + P I+Y +RTH QI+QV+ E K+TAY+ M +L+SR H C + R+K ++ E
Sbjct: 1 RAQKVPKIYYGTRTHKQIAQVVKELKRTAYKHKRMTILSSRDHTCIQQTNRNKNDLCNE- 59
Query: 198 KLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMAD 257
LL +N CP + N H + G DIEDLV++G + C Y+ ARS+
Sbjct: 60 -LLDPHKNKTCPYY-NEHSKKKASIF--GSMPTPWDIEDLVSLGNSIGACPYFGARSLMT 115
Query: 258 DAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQM 317
A ++FCPY+YI++P IR +M++ ++G I+ILDEAHNIEDI R+A +V + +D + M
Sbjct: 116 KADIIFCPYNYILDPAIRESMQIRLRGDIVILDEAHNIEDICREAANVILRDDEINTAIM 175
Query: 318 ELEQVCSV---------NPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKA 368
+ + +V +Y + + +D V +I++ K E +H
Sbjct: 176 DCHHLSAVYRDKYHDPNTAAVYDTIEKYFEDFVKFIQKIDVEQNKNEERH---------- 225
Query: 369 LRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVITLEGLFSSLTYFFSRN 428
+ I+R DT++ L HL + +E + S +
Sbjct: 226 --NKIKPTITR------------------DTKNILEHLC----LAIEMITSDI------- 254
Query: 429 GSHVSDYQLALQKYIKRD-------------SKNPGGNWTHTLSLWCLNPAVVFKDVAEL 475
+ +DY++ + + I+ SKN TL + C+NPAV F +A
Sbjct: 255 --YANDYRIYVVETIEASKIKPVCLSNLIWLSKNTEKTKIRTLKVICMNPAVTFAPLARD 312
Query: 476 SLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYK 535
+ S+IL SGTL+P SF SELG +F + H+I D Q+ I P+ Y+
Sbjct: 313 TRSVILASGTLTPTTSFQSELGTKFPRIVNPNHIIPKD-QIYIRCIPRAPNGQSFKVVYE 371
Query: 536 TAD----------------------------GYKLMEKLCNRWRETGQWSRLNAKKPLFV 567
+ Y +M +CNRW+E W +L+ K +F+
Sbjct: 372 EVNKWTFQDNLGNLVIQVCDAVPYGVLCFFSSYHVMNTICNRWKENKMWDKLSTLKTIFM 431
Query: 568 EPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFL 627
EPK + V++ Y + I + S +Q + GA
Sbjct: 432 EPKDHREN--HQVMEEYRSVIEKSS----------------------TQSFRDSCGALLF 467
Query: 628 AVCRGK---------------IVVGIP-FPNINDIQVSLKKKYNDTYRSSKNLLSGNEWY 671
AV RGK + +GIP F NDI ++K YND SK LLSG EWY
Sbjct: 468 AVFRGKMAEGIDFSDNEARCVLAIGIPYFRQSNDI--TMKMNYNDA-NISKGLLSGREWY 524
Query: 672 CNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIK 721
AFRALNQAIGRC+RH D+GA++L+DER + +N ++ KW+++++K
Sbjct: 525 TVNAFRALNQAIGRCVRHINDWGAVLLIDERHMQSKNNDYLPKWIKQNMK 574
>gi|339251144|ref|XP_003373055.1| fanconi anemia group J protein [Trichinella spiralis]
gi|316969101|gb|EFV53261.1| fanconi anemia group J protein [Trichinella spiralis]
Length = 1052
Score = 281 bits (718), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 214/727 (29%), Positives = 330/727 (45%), Gaps = 192/727 (26%)
Query: 132 AMNNKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYR-VPMAVLASRKHYCTNKYVRDK 190
A N+ +K+ P IFYA+RTH Q+SQ+I E KKT Y+ V M ++ASR C N
Sbjct: 385 AANSAACQKRRVPKIFYATRTHKQLSQMIRELKKTEYKNVRMTIMASRDFTCLN------ 438
Query: 191 ENIDEECKLLLGDRNLGCPQFKNVHKV--------------------------RGHPSLQ 224
+ ++ C D+ C Q K+V ++ R H
Sbjct: 439 DKVNNHC-----DKAAACLQVKDVLEIFLQFLLIKNCSYYKGLQAFGQETSMLRKHVQSS 493
Query: 225 KGGCHEVH-----------DIEDLVNVGQVVRGCSYYAA-RSMADDAQLVFCPYSYIINP 272
K ++ DIE+LV G+ + C Y+A+ +M DA L+FCPY Y+I+P
Sbjct: 494 KKRVKDIWEIIEENDDFAWDIEELVEAGRKLNFCPYFASVDNMYQDANLIFCPYGYLIDP 553
Query: 273 VIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQVCSVNPMIYQP 332
V+R + +++KG ++I DEAHN+ED + S I + L+ L + + P +
Sbjct: 554 VVRSSSNINLKGQVIIFDEAHNMEDECCEKASFQITKQELVDAVEYLSSIEELVPESKKS 613
Query: 333 L----IEMTQDLVGWIERRKAT--LAKREFQHFFSCWTGDKALRELQEANISRQCFPILL 386
L E+ + ++ WI+++ + + + W+G ELQE + IL
Sbjct: 614 LQDNCTELVKSVIEWIDKKSVIEEMTNHSEKFYTKIWSGRAMYAELQEMKLHYDAGNIL- 672
Query: 387 ECATKAIKE------------ATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSD 434
KAI++ T T E H + LE L L Y + D
Sbjct: 673 ---QKAIQKFDSVFKPDNSLNVTGTIFEKKH-DNQPLTVLEKLILILKYIYK-------D 721
Query: 435 YQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSS 494
Y+L T T S C + +F D++ + S+IL SGTL+P+ ++++
Sbjct: 722 YRL-----------------TPTDSYDCYSYKFIFHDISSSARSVILASGTLAPLKTYAN 764
Query: 495 ELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTA----------------- 537
ELG+ F LEAPHVI D +V GP + PL A+Y+ A
Sbjct: 765 ELGLPFQYLLEAPHVILPD-RVWIGATGVGPKHVPLKATYQLAQSTEFQDELGRLLIEIC 823
Query: 538 ----DG-------YKLMEKLCNRWRE----------TGQWSRLNAKKPLFVEP-KGGSQE 575
DG Y ++ L RW++ + WS+LN K + VEP K GS
Sbjct: 824 KVTPDGVLCFLPSYTFIDCLLTRWKKVPPSCNFQVNSSLWSQLNVYKMVVVEPRKNGS-- 881
Query: 576 DFEIVLKHYYNSISQ----GSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCR 631
D +++ + +I G KC GA LAV R
Sbjct: 882 DVRLIMDRFTETIKDPKKVGPKC---------------------------NGALLLAVYR 914
Query: 632 GKI---------------VVGIPFPNINDIQVSLKKKYN-DTYRSSKN------LLSGNE 669
GKI VGIP+P++ D+++ LK +YN + +++K L+SGN+
Sbjct: 915 GKISEGVDFADQQARAVVTVGIPYPDMEDMRIRLKIQYNNERLKNAKRIAEMAPLISGNQ 974
Query: 670 WYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDAS 729
WY QAFRALNQA+GRC+RH+ D+GA++L+D RFQ ++S W+RK+++ YD FD
Sbjct: 975 WYQAQAFRALNQALGRCLRHKLDWGALLLVDSRFQNAEYSCNLSTWIRKNLRCYDRFDQM 1034
Query: 730 LEGLKSF 736
+ L++F
Sbjct: 1035 ICNLQTF 1041
>gi|5902361|gb|AAD55463.1|AC009322_3 Hypothetical protein [Arabidopsis thaliana]
Length = 912
Score = 281 bits (718), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 237/789 (30%), Positives = 351/789 (44%), Gaps = 155/789 (19%)
Query: 18 YHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLA 77
Y + GI VEFP++ Y SQ+++M RVI +L CHALLESPTGTGK+L LLC+TLA
Sbjct: 49 YSIRGINVEFPFEAYQSQIIYMDRVIESLQ-----NKCHALLESPTGTGKTLCLLCATLA 103
Query: 78 WQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKN 137
W+++ L + S K + IP S S P S +G A
Sbjct: 104 WRKS------LGSFSTRKDRKNSA----------IPWSD-SDEPLSQSGGGGGGAF---- 142
Query: 138 VKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRD--KENIDE 195
PTI YASRTHSQ+ QVI E K+++YR M VL SR+ C N+ V + +
Sbjct: 143 ------PTIVYASRTHSQLRQVIKELKRSSYRPKMVVLGSREQLCVNEEVNSLRGKALTN 196
Query: 196 ECKLLLGDRN-LGCPQFKNVHKVRGHPSLQKGGCH---EVHDIEDLVNVGQVVRGCSYYA 251
C+ L R C F + P K H E DIEDLVN+G+ C YY
Sbjct: 197 ACQYLCKKRGKRQCNHFNRL------PDYLKHNPHIGDEPVDIEDLVNIGKDSGPCPYYI 250
Query: 252 ARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDV 311
R + D ++F PY+Y+I+ R ++V+ ++LI DEAHN+E + D+ S D+ V
Sbjct: 251 TRELHKDVDIIFAPYNYLISNGYRKFLKVNWTNSVLIFDEAHNLESLCADSASFDL-PSV 309
Query: 312 LLKLQMELEQVC--------------SVNP---MIYQPLIEMTQDLVGWIERRKATLAKR 354
LL + Q C S+NP I + L+ Q+L+ K + KR
Sbjct: 310 LLSACISEAQECVQLAAARRDSLNDVSINPENFAILKGLLLKLQELIS-----KVPIPKR 364
Query: 355 EFQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVITL 414
+ + F G L+ NI+ + P L+ +A A E E + + L
Sbjct: 365 D-EGFTK--PGPYIYEMLKSLNITHETAPKLIGTVEEA---AVFLEEEKQRTATNAGSKL 418
Query: 415 EGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAE 474
E + L F NGS+ +D V++ + E
Sbjct: 419 EIIADMLKLIFRENGSNHAD---------------------------------VYRLIME 445
Query: 475 LSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASY 534
S F F LE PHVI + Q+ V+STGP Y LN+SY
Sbjct: 446 TSF--------------FGKRR--DFPIRLENPHVISSN-QLWAGVVSTGPSGYVLNSSY 488
Query: 535 KTADGYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKH--YYNSISQGS 592
+ D + ++L N +SR+ + L P + K+ Y NS++
Sbjct: 489 RNRDVPEYKQELGN---AIVNFSRVVPEGLLIFFPSYYLMDSCITFWKNGCYRNSMTVWE 545
Query: 593 KCAVVRKKRVKREGNNDLNTI-----ESQENANKKGASFLAVCRGKI------------- 634
+ ++K ++ + ++ E ++ G F AVCRGK+
Sbjct: 546 RICKLKKPVIEPKDSSLFPAAMRDFSEKLQDRATSGVVFFAVCRGKVSEGLDFADGAGRA 605
Query: 635 --VVGIPFPNINDIQVSLKKKY-------NDTYRSSKNLLSGNEWYCNQAFRALNQAIGR 685
+ G+P+ + D +V LK+++ D LLSG+ WY +A RA+NQAIGR
Sbjct: 606 VVITGLPYARVTDPRVKLKREFLDEQSQLADVKLPRSTLLSGSMWYSQEAARAVNQAIGR 665
Query: 686 CIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFRDVKGWVG 745
IRHR DYGAII D+RF++ ++ IS W+R ++K Y + + L FFR +
Sbjct: 666 VIRHRHDYGAIIFCDDRFEQPSQQSKISLWIRPNVKCYSRYGEVISDLARFFRTERSNFP 725
Query: 746 KKMFNGLEN 754
++ EN
Sbjct: 726 ARLVTEQEN 734
>gi|300176870|emb|CBK25439.2| unnamed protein product [Blastocystis hominis]
Length = 1177
Score = 280 bits (717), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 242/864 (28%), Positives = 381/864 (44%), Gaps = 197/864 (22%)
Query: 14 PLNAYHVGGIQVEFPYQ--PYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSL 71
P Y G++VEFP P+ SQ M ++ +L R + +A++ESPTGTGK+L++
Sbjct: 42 PYTTYRFYGLEVEFPQDRIPFSSQKSTMTAIVKSLSRNE-----NAIVESPTGTGKTLAI 96
Query: 72 LCSTLAWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQ- 130
LCS+L+W I ++P I +QPS IPP +
Sbjct: 97 LCSSLSW------------IKSTQP---------------IEATQPSEIPPVPEATQSSD 129
Query: 131 -----------VAMNNKNVKKKMTPTIFYASRTHSQISQVISEYKKTAY----------- 168
A+NN K+ T I+Y SRTHSQ+ Q I E K++ +
Sbjct: 130 YEAIDKLREKLRALNNSLTKQ--THHIYYCSRTHSQLDQAIQELKRSNFLMYTHRSEGRI 187
Query: 169 -------------RVPMAVLASRKHYCTNKYVRDKEN--IDEEC----KLLLGDRNLGCP 209
+ M VLAS+ HYC NK V + N +DE C +L +
Sbjct: 188 ALSLPVLVTEQQRELSMTVLASKSHYCINKAVLENPNFSVDEICGHERELAFLSQGETEK 247
Query: 210 QFK-NVHKVRGHPSLQK--GGCHEVHDIEDLVNVGQVVRGCSY-----------YAARSM 255
F N K R + H V DIED+ + Q C Y + AR +
Sbjct: 248 SFDMNFCKFRKQERIFACAKSIHGVLDIEDMKRLCQRKNVCPYVCRIRFRIDVKFVAREL 307
Query: 256 ADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKL 315
+Q++F PY+Y+I+P IR +M +++ + +I DEAHNI AR + + I L +
Sbjct: 308 MTKSQIIFAPYNYVIDPQIRDSMSINLAKSSIIFDEAHNILTTARSSAGMTIK---LREF 364
Query: 316 QMELEQVCSVNPMIYQPLIEMTQD-----LVGWIERRKATLAKREFQHFFSCWTGDKALR 370
Q + S + L+++ +D +E +TL F +G+ ++
Sbjct: 365 QEKTNHFIS-----FMSLLKIEKDNKYLSFTNLVELWNSTLNSHSDDSLFRLESGE-SMM 418
Query: 371 ELQEANISRQCFPI--------LLECATKAIKEATDTE-------SELPH-LSGMSVI-T 413
L ++ + + + L++ K I + TD + + + H L+ M V+
Sbjct: 419 NLLKSGFFQNPYDLDIISKNIDLIDAWKKEIDQMTDQDELGDKERNFIRHCLASMGVLGV 478
Query: 414 LEGLFSSLTYFFSRNGSHVSDYQLALQKYI-------------KRDSKNPGGNWTHTLSL 460
L L +TY F+ G +VSD++L +++ + S NP LS+
Sbjct: 479 LRNLARVMTYLFTDAGKYVSDFRLLIEQALPSKSKSKSKFYSKFYSSTNPEPANVE-LSI 537
Query: 461 WCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSV 520
CLN A+VF+D+ SI+LTSGTL+P++SF++EL + F +E IDV Q+ +V
Sbjct: 538 LCLNAAIVFEDIKSTCSSIVLTSGTLAPLSSFANELNIPFQNQMEGIASIDVHRQLFAAV 597
Query: 521 IST-------GPDNYPLNASYKTADG--------------------YKLMEKLCNRWRET 553
+ + G N Y A G Y ++ + + W++T
Sbjct: 598 VPSYHNVSLLGSYQNRSNPLYMDAVGDVLLDCVQVIPAGVVFFFPSYSVLNQFLSYWKKT 657
Query: 554 GQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVV----RKKRVKREGNND 609
RL+ K +++E + F VL +Y + + C R + K G
Sbjct: 658 KFIDRLSQIKQVYIEQRDAV--GFSAVLTNYTTFMD--NFCTFFPPFSRPDKCKERG--- 710
Query: 610 LNTIESQENANKKGASFLAVCRGKIVVGI---------------PFPNINDIQVSLKKKY 654
+ ++ GA F VCRGKI GI P+PN + ++ L ++Y
Sbjct: 711 ------IQPSSVTGALFFGVCRGKISEGIDFKDYMARAVISLSIPYPNSHAHEIRLMREY 764
Query: 655 NDT-YRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHIS 713
D ++ + N+ G+ WY QAFRALNQ +GRCIRH DYGAIILL+ RF + +S
Sbjct: 765 MDQQHQLNPNVQDGSSWYDEQAFRALNQGLGRCIRHSRDYGAIILLESRFGNPEVKKRLS 824
Query: 714 KWLRKSIKQYDSFDASLEGLKSFF 737
+W R I+ S + GLK+FF
Sbjct: 825 RWFRDEIRVSRSDAELIRGLKAFF 848
>gi|198421637|ref|XP_002120480.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
Length = 1008
Score = 279 bits (714), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 228/821 (27%), Positives = 361/821 (43%), Gaps = 184/821 (22%)
Query: 17 AYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
A + GI+VEFP+ Y Q +M +VI L+ H +A LESPTGTGK+L LLCSTL
Sbjct: 3 ALDIHGIKVEFPFTAYEVQKSYMTKVIQALN-----THQNAALESPTGTGKTLCLLCSTL 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNK 136
AW++ +++ K T V+ A +S+ S IP
Sbjct: 58 AWRRQ--------HLNELKKHTNPVSQEDAWSSS--EKSKDSAIP--------------- 92
Query: 137 NVKKKMTPTIFYASRTHSQISQVISEYKKTAY--RVPMAVLASRKHYCTNKYVRDKENID 194
P I YASRTHSQISQV+ E K+T Y + +++L SR+ C + V + +
Sbjct: 93 ------APKIIYASRTHSQISQVVKELKRTDYGKDITISILGSREQMCIHPEVSKQTSNQ 146
Query: 195 EECKLLLGDRNL-GCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAAR 253
+ G N C + NV + + +V DIE+LV VG+ C YY+ R
Sbjct: 147 AMVHMCRGKINKHTCQFYNNVEDAKKNNIFTT----KVMDIEELVTVGKSRTVCPYYSER 202
Query: 254 SMA--DDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVD----- 306
++ ++ ++F PY+Y+++ R ++I+G I+I DEAHN+E + ++ S D
Sbjct: 203 EVSKQNECGIIFTPYNYLLDRKSRATNNLEIRGNIVIFDEAHNLEKLCEESTSFDLTSLE 262
Query: 307 ----IDE-----DVLLKLQ--------------MELEQVCSVNPMIYQPLIEMTQDLVGW 343
I+E D K + + L + S + I + + + L+
Sbjct: 263 VAKCIEEVGDVLDAATKFEESGTVADGHENGESLSLSEFKSQDLAIMKSVFIALEKLLDQ 322
Query: 344 IERRKATLAKREFQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESEL 403
+E K T ++ E F L + N++ + I+L+ K I T S
Sbjct: 323 VELNKDTKSRSEPGKFM--------FEFLSKINLTESTYQIMLDVVDK-ISTYLSTLSNS 373
Query: 404 PHLSGMSVITLEGLFS-SLTYFFSRNGSHVSDYQLALQKY-------------------I 443
+ G ++ + + ++ H++ Q +Q+ +
Sbjct: 374 LRIRGAALQKFSEIVKVAFSWMEDETKGHMTRAQ-RMQELCMCYRVHICENAETGKSTDV 432
Query: 444 KRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGT 502
+ S N T+S WC +P ++ + + ++ILTSGTLSP+ SF+SEL + F
Sbjct: 433 WKRSANTSSKPGRTISFWCFSPGYAMTNLVKCGVRNLILTSGTLSPLESFTSELQIDFPI 492
Query: 503 CLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKT--------------AD---------- 538
LE HVID QV ++ G LN+++KT AD
Sbjct: 493 TLENDHVID-KHQVFVITLTHGKKGGLLNSTFKTRKDVNQVQELGLTVADMIAAAPGGAL 551
Query: 539 ----GYKLMEKLCNRWRETGQWSRLNAK-KPLFVEPKGGSQEDFEIVLKHYYNSISQGSK 593
Y M + W+E L K KP VEPK ++ + + YY ++ G
Sbjct: 552 VFFPSYSAMAEYLTIWKENSNVMTLVEKVKPCTVEPK--NKHELRTAIDKYYTDVNTG-- 607
Query: 594 CAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGI 638
G +FLAVCRGK I+VGI
Sbjct: 608 -----------------------------GGTFLAVCRGKVSEGLDFSDDNGRTVIIVGI 638
Query: 639 PFPNINDIQVSLKKKYNDTYRS--SKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAI 696
P+P D ++ +K + D R+ + +LL+G EWY QA RA+NQAIGR IRHR+DYGAI
Sbjct: 639 PYPPAFDPRIKMKMAFLDDLRTKGATSLLTGREWYRQQACRAVNQAIGRVIRHRYDYGAI 698
Query: 697 ILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFF 737
+L D R+ + + KW++ + ++++ + L+SFF
Sbjct: 699 VLCDHRYAGRDQLSELPKWVQPHVVKFNNAAKCIRRLRSFF 739
>gi|350414537|ref|XP_003490348.1| PREDICTED: regulator of telomere elongation helicase 1 homolog
[Bombus impatiens]
Length = 980
Score = 278 bits (711), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 241/816 (29%), Positives = 366/816 (44%), Gaps = 171/816 (20%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ + V FP++PY Q +M +VI L + + +LESPTGTGK+LSLLCS+L+W
Sbjct: 6 INNVIVNFPFKPYSIQEEYMVKVIECLQNGK-----NGVLESPTGTGKTLSLLCSSLSWL 60
Query: 80 QNCKLKNQLANI--SHSKPDTEA-VTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNK 136
K + Q ++ + KPD L+NG + E + P S G
Sbjct: 61 LTKKAQLQAQSLIGAIEKPDFGGHFFKQLSNG---LKEGTGDSKPTSNLGWAP------- 110
Query: 137 NVKKKMTPTIFYASRTHSQISQVISEYKKTAYR-VPMAVLASRKHYCTNKYVRDKENIDE 195
P I YASRTHSQ+SQ + E K+T+Y+ V AVL SR C + V + +
Sbjct: 111 -------PKIIYASRTHSQLSQAMQELKRTSYKHVSTAVLGSRDQLCIHPEVSKETSSSN 163
Query: 196 E---CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAA 252
+ C + R C + NV + P ++ EV DIEDLV GQ + C Y+ +
Sbjct: 164 KIYMCHSKIKSRT--CFYYNNVESRKDDPLFKQ----EVLDIEDLVKAGQKFKCCPYFLS 217
Query: 253 RSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILIL----------DEAHNIEDIARD- 301
R + +A + F PY+Y+++ R +DI+ I++L +EA +++ + D
Sbjct: 218 RELKQNADITFMPYNYLLDSKSRKTQGIDIQNNIILLDEAHNIEKTCEEAASLQICSTDI 277
Query: 302 AGSVDIDEDVLLKLQMELEQ--------------------VCSVNPMIYQPLIEMTQDLV 341
A +D V+ + +EQ +C + M + +E D +
Sbjct: 278 AMCIDEITAVMEDMASNVEQENDFSMENSGNTVKDFTADDLCILKAMFLE--LEKAIDAI 335
Query: 342 GWIERRKATLAKREFQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTES 401
+ R + + G L +A ++ +++E K T T +
Sbjct: 336 EILNRNEG-----------DTFPGGYIFELLGKAQLTHGREQLVIEKLEKIAFYLTTTST 384
Query: 402 ELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSD---------YQLALQKYIKRDS----- 447
G ++ L T F S N + QL QK K++
Sbjct: 385 SPFTRKGHALQKFSDLLK--TVFSSGNSPRYREKIKQCYKVYIQLEEQKKTKQNEVWETK 442
Query: 448 KNPGGNWTHTLSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLEA 506
K N + +S WC +P + + + + SIILTSGTLSP+ F SELG+ LE
Sbjct: 443 KILKKNESKVISYWCFSPGFSMQQLMDQGVRSIILTSGTLSPLKPFISELGIPIELQLEN 502
Query: 507 PHVIDVDLQVLTSVISTGPDNYPLNASYKTAD---------------------------- 538
PH++ D Q+ V+S GPD Y LN+S+ T +
Sbjct: 503 PHIVKGD-QICVGVLSQGPDGYSLNSSFNTRNDPKYIASLGRTVLNFSCIIPHGLLVFFP 561
Query: 539 GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVR 598
Y +M+K W+ TG W+++ +KP++VEP+ ++ F V+ YY I S C
Sbjct: 562 SYPIMKKCKEEWQTTGLWTKIADRKPIYVEPQ--YRDGFINVMNEYYEKIKDPS-C---- 614
Query: 599 KKRVKREGNNDLNTIESQENANKKGASFLAVCRGKI---------------VVGIPFPNI 643
KGA F+AVCRGK+ + G+PFP +
Sbjct: 615 -----------------------KGAIFMAVCRGKVSEGLDFANANGRAVLITGLPFPPL 651
Query: 644 NDIQVSLKKKY-NDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDER 702
D +V LK++Y + + +K LSG +WY +A RA+NQAIGR IRH+ DYGAIIL D R
Sbjct: 652 KDPRVILKQRYLEEMKKQNKEALSGQQWYQLEASRAVNQAIGRIIRHKNDYGAIILCDCR 711
Query: 703 FQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
F + H+S WLR IK + SF ++ LK FFR
Sbjct: 712 FDNPSFKKHLSAWLRPHIKNFTSFGIIMKELKDFFR 747
>gi|154341304|ref|XP_001566605.1| putative helicase [Leishmania braziliensis MHOM/BR/75/M2904]
gi|134063928|emb|CAM40119.1| putative helicase [Leishmania braziliensis MHOM/BR/75/M2904]
Length = 954
Score = 276 bits (706), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 234/821 (28%), Positives = 349/821 (42%), Gaps = 209/821 (25%)
Query: 19 HVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
+V GI V FP+ PY +Q+ FM V+ L + LLESPTGTGK+L LLCSTLAW
Sbjct: 6 NVSGITVSFPFDPYPAQVEFMRSVVECLQHG-----FNGLLESPTGTGKTLCLLCSTLAW 60
Query: 79 QQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNV 138
SQ + P++ + M+ V
Sbjct: 61 --------------------------------IAATSQDAIFRPTSGREQKGRGMHTHKV 88
Query: 139 KKKMTPTIFYASRTHSQISQVISEYKKTAY--RVPMAVLASRKHYCTNKYVR---DKENI 193
Y SRTH+Q++QV+ E ++T+Y R MAVL SR+H C NK V +
Sbjct: 89 --------VYCSRTHAQLTQVVRELRRTSYAQRFTMAVLGSREHMCLNKEVTRLPSSQAQ 140
Query: 194 DEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAAR 253
+ C +L +RN C F+ + L C VHD+EDL+ G C Y+ R
Sbjct: 141 NTMCSVLRSERN--CRFFRGLQSAAAGAGLLPPEC-VVHDMEDLMREGSRSGFCPYFHER 197
Query: 254 SMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHN------------------- 294
A DA +VF PY+YI++P+++ + +++ ILI+DEAHN
Sbjct: 198 DAAKDADVVFLPYNYILDPLLQKQLPFELRNCILIVDEAHNLPSVLSSSSCQTLSPLDVT 257
Query: 295 --IEDIARDAG-------SVDIDEDVLLKLQMELEQVCSVNPMIYQPLIEMTQDLVGWIE 345
I D +R ++DEDV L+ + EL + I +EM + E
Sbjct: 258 TAIHDCSRAIAMHRLTTKKAELDEDVALEEEQELASL-----KILLSRLEMCL----YAE 308
Query: 346 RRKATLAKREFQHFFSCWTGDKALRELQEANISRQCFPILLECATKA-----IKEATDT- 399
+ +A G L++A I+R+ F + + T A I T
Sbjct: 309 PMEEGMAASTPMQCDMVRNGSYMFAFLEKALITREVFGVQSDSVTSASGLTGIMGKCVTL 368
Query: 400 --ESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHT 457
ESE P S V LT+ F + +H+ + LQ+ + T
Sbjct: 369 LAESERPATSMARVQEF------LTFVFDFDPAHLDSTRFVLQQQLV------AAKAART 416
Query: 458 LSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVL 517
L W L+ + + V S +LTSGTLSP++ F++ELGV+F L+ HVI D QVL
Sbjct: 417 LGFWELDNTRLMRQVVLPLHSTLLTSGTLSPLDQFAAELGVEFQVRLKGSHVIQPD-QVL 475
Query: 518 TSVISTGPDNYPLNA--SYKTADGYKL--------------------------MEKLCNR 549
V+ GP LN SY+++ Y++ M +
Sbjct: 476 GGVLCRGPSGEKLNGGFSYRSSVDYRVGLGMSLANIARNTPGGTLVFFPSYAAMNSVVEL 535
Query: 550 WRE-TGQ-------WSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKR 601
WR +G+ W L+ KP+FVEP
Sbjct: 536 WRAGSGRAGDTKTVWGLLSELKPIFVEPN------------------------------- 564
Query: 602 VKREGNNDLNTI-----ESQENANKKGASFLAVCRGKI---------------VVGIPFP 641
+NDL TI + + + +GA LAVCRGK+ V GIP+
Sbjct: 565 ----NSNDLPTIVQGFQKEVDTSPLRGAILLAVCRGKVSEGIDFADNHGRCVFVTGIPYA 620
Query: 642 NINDIQVSLKKKYNDTYRSSKNLL-----SGNEWYCNQAFRALNQAIGRCIRHRFDYGAI 696
N D+ V LK++Y + L+ +G++WY +A RA+NQ +GR IRH+ DYG +
Sbjct: 621 NHTDLFVRLKREYITLVAPQRPLVHGRPFTGDDWYRCEAMRAVNQCLGRVIRHKDDYGVV 680
Query: 697 ILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFF 737
+L DERF E + +S+W+R+ + + F + + FF
Sbjct: 681 LLADERF--EGLLSGVSEWVRRRTRVFSDFRGAYAAVAQFF 719
>gi|342180293|emb|CCC89770.1| putative helicase [Trypanosoma congolense IL3000]
Length = 965
Score = 276 bits (705), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 242/829 (29%), Positives = 363/829 (43%), Gaps = 197/829 (23%)
Query: 15 LNAYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCS 74
+++ + I+V FP+ PY Q+ +M V+ +L A +ALLESPTGTGK++ LLC+
Sbjct: 1 MSSIPIDNIEVAFPFSPYTVQVEYMQAVLRSLKGAH-----NALLESPTGTGKTMCLLCA 55
Query: 75 TLAWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMN 134
TLAW ++ + + +NG N
Sbjct: 56 TLAWLEDWRAYCR------------------------------------SNG------FN 73
Query: 135 NKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYR--VPMAVLASRKHYCTN-KYVR--D 189
+ + ++ + Y SRTH+Q++QVI E+++T Y MAVL SR H C N + VR
Sbjct: 74 DPTLLRR----VVYCSRTHAQLTQVIREFERTRYSSCFSMAVLGSRDHMCVNPQVVRLPS 129
Query: 190 KENIDEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHE--VHDIEDLVNVGQVVRGC 247
+ + C L +RN C F+ +G+ + E VHD+EDLV GQ C
Sbjct: 130 QHAQQKMCSTLREERN--CRFFRGY---QGYSDNKNSLMDEFWVHDMEDLVKEGQKCGLC 184
Query: 248 SYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDI 307
Y+ R A DA +VF PY+Y+ + +R + ++ G+ILI+DEAHN+ + +++
Sbjct: 185 PYFYERDKARDADIVFLPYNYVFDTSLRKQLPFELSGSILIVDEAHNLPSVLGAVSGMNL 244
Query: 308 D-----------------EDVLLKLQMELEQVCSVNPMIYQPLIEMTQ---DLVGWIERR 347
VL+K + E+ C + M Q L + DL +I
Sbjct: 245 QPLDLTNAIHDCSRAMALRKVLMKAAEDSEEQCDL--MDEQELAALKIILCDLETFIAGE 302
Query: 348 KATLAKREFQHFFSCWTGDKALRE-------------LQEANISRQCFPILLECATKAIK 394
A L E +S G E L++A+I+R F + A +
Sbjct: 303 PAQLPDGEDSKKYSHRVGGTGFVEGEIVRRGSYMIPFLKKASITRDMF-FGEDNAKGGMN 361
Query: 395 EATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNW 454
E L + + + L + LT+ F + V D + +I + G
Sbjct: 362 EVISKALTLLNQGETAGVGLSKVQQFLTFVFGQC-LEVDDDEACF--FIMTSGRGTGDRC 418
Query: 455 T-HTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVD 513
+ TLS WC++ + K V + + S++LTSGTLSP++ F+ ELG+ F L+ HVI+
Sbjct: 419 SVRTLSYWCMDISRSIKGVVDSTHSLLLTSGTLSPLDHFAMELGIHFEVRLKGDHVIE-Q 477
Query: 514 LQVLTSVISTGPDNYPLNASY--KTADGYK--------------------------LMEK 545
QV+ SV+ GP LN SY + GY+ M
Sbjct: 478 KQVVASVLCKGPGGERLNGSYAFRCGAGYRGAIGATLVNISTLTPGGMLVFFPSYVAMNA 537
Query: 546 LCNRWRETGQ---------WSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAV 596
+ WR TG W+ L KP+FVEP G+ ED VLK Y + +
Sbjct: 538 AVDLWR-TGSGRVGETETIWAALVKNKPVFVEP--GNAEDANTVLKSYQQEVDKDP---- 590
Query: 597 VRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFP 641
+GA LAVCRG+ +VVGIPF
Sbjct: 591 ------------------------TRGALLLAVCRGRTGEGVDFADHHGRCVVVVGIPFA 626
Query: 642 NINDIQVSLKKKYND---TYRSSKN--LLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAI 696
N D+ V LK++Y T+R + L +G+EWY N+A R+++Q IGR IRHR DYGAI
Sbjct: 627 NCTDLLVRLKREYITRVATHRPKVDGKLFTGDEWYVNEAMRSVSQCIGRVIRHRNDYGAI 686
Query: 697 ILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSF---FRDVKG 742
+L DERF + N + KW+ + F S + F FR VKG
Sbjct: 687 VLADERFADRMN--CLPKWVASRCTVHREFGGSYACVADFFKSFRRVKG 733
>gi|357631598|gb|EHJ79067.1| FancJ-like protein [Danaus plexippus]
Length = 830
Score = 275 bits (703), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 203/687 (29%), Positives = 318/687 (46%), Gaps = 136/687 (19%)
Query: 136 KNVKKKMTPTIFYASRTHSQISQVISEYKKTAY--RVPMAVLASRKHYCTNKY-VRDKEN 192
K V+ K P I+Y +RTH Q+ QV+ E+ KT Y M +L+SR+H C + ++ +
Sbjct: 188 KGVQSKSLPIIYYGARTHKQLEQVVQEFSKTVYAENALMTILSSREHSCIKDFDIKRWPS 247
Query: 193 IDEECKLLLGDRN-----LGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGC 247
++ C+ ++N C + N HK+ H +L + +E L++VG+ + C
Sbjct: 248 KNDMCRGCTKNQNSSDSETSCVYYDN-HKLLKHSTLPRA-----FSLETLLSVGRKKKAC 301
Query: 248 SYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDI 307
YYAAR MA A +VFCPYSY+I P IR +M+++++ ++I+DEAHNIEDI R+A +
Sbjct: 302 PYYAARKMAAVAHIVFCPYSYLIEPAIRKSMQINLENNVVIIDEAHNIEDICREAATF-- 359
Query: 308 DEDVLLKLQME--LEQVCSVNPMIYQP---------LIEMTQDLVGWIERRKATL----- 351
KLQME L+++ + + + L ++ W +K L
Sbjct: 360 ---TFTKLQMENALKEMKAASSFRFANDEAIDYITYLQTSLEEWCLWFANQKPLLDNQPR 416
Query: 352 --AKREFQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGM 409
A E+ W + + L +I ++ +P + A K+ D L ++
Sbjct: 417 NGAASEY-----AWDVHQFVETLNNHSIGQKQYPEFNKHAGIFCKKFRDDPRLLVGITQS 471
Query: 410 SVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNW------------THT 457
+ +E L + L Y F +G+ + DY+ L + I+ + NW + +
Sbjct: 472 TNTIIENLDTVLGYLFRNSGTCMDDYKPILVRKIESYDASYNHNWRKSNFEQKVLPESLS 531
Query: 458 LSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVL 517
L+L CLNPAV+F V S ++L SGTL+PM S SELG F + A + I D +V
Sbjct: 532 LTLCCLNPAVLFASVLS-SRCVVLASGTLTPMASLHSELGTHFTHAVSATYEISKD-RVW 589
Query: 518 TSVISTGPDNYPL-----------------NASYKTAD-----------GYKLMEKLCNR 549
+ +G + Y D Y+LM L R
Sbjct: 590 VGSLKSGTSGEKICCISKYTSVSNVQDDLGEMVYGVCDVTPHGVLCFLPSYRLMNLLVKR 649
Query: 550 WRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNND 609
WR + W RL AKK +FVE +K + N + C
Sbjct: 650 WRYSHLWERLEAKKHVFVESTH---------MKTHVNMMKAFDNCV-------------- 686
Query: 610 LNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKKY 654
+GA LAV RGK I +GIP+P+ D V K KY
Sbjct: 687 ---------GTDRGALLLAVYRGKVAEGMDFKDHQARAVIAIGIPYPS-KDRAVEEKMKY 736
Query: 655 NDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISK 714
ND Y ++NLL+G EW QA+RALNQA+GR +RH D+G ++L+D R+QE + H+++
Sbjct: 737 NDKYSKNRNLLNGREWLKIQAYRALNQAVGRVMRHVGDWGGVLLVDSRYQEPQYSEHLAQ 796
Query: 715 WLR----KSIKQYDSFDASLEGLKSFF 737
W++ K+ ++S S GL++F
Sbjct: 797 WVKDLLGKNHHDFNSLFKSDAGLRAFM 823
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 42/60 (70%), Gaps = 5/60 (8%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ G++V P +PY Q+V M +VI ++ Q + LLESPTGTGK+L+LLCS+LAWQ
Sbjct: 14 ILGVEVVLPIEPYRCQMVVMSKVIKAINEGQ-----NCLLESPTGTGKTLALLCSSLAWQ 68
>gi|328783139|ref|XP_396001.4| PREDICTED: regulator of telomere elongation helicase 1 homolog
[Apis mellifera]
Length = 976
Score = 275 bits (703), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 234/811 (28%), Positives = 373/811 (45%), Gaps = 155/811 (19%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ I + FP++PY Q +M +VI L ++ + +LESPTGTGK+LSLLCS+L+W
Sbjct: 6 INNIIINFPFKPYSIQEEYMAKVIQCLQNSK-----NGVLESPTGTGKTLSLLCSSLSWL 60
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVK 139
K + Q ++ ++ + +P N GG + + + ST G + + N
Sbjct: 61 LTKKAQLQAQSLVNT------IEEP--NFGGHFFKQLNNGLKKST-GDSESITFNWN--- 108
Query: 140 KKMTPTIFYASRTHSQISQVISEYKKTAYR-VPMAVLASRKHYCTNKYVRDKENIDEECK 198
P I YASRTHSQ+SQ + E K+T+Y+ V AVL SR C + V + N +
Sbjct: 109 ---APKIIYASRTHSQLSQAMQELKRTSYKHVGTAVLGSRDQLCIHPEVSKETNSSNKIY 165
Query: 199 LLLGD-RNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMAD 257
+ ++ C + N+ + P ++ E+ DIEDLV GQ + C Y+ +R +
Sbjct: 166 MCHSKVKSRTCFYYNNIESRKDDPFFKQ----EILDIEDLVKAGQKFKCCPYFLSRELKQ 221
Query: 258 DAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDID--------E 309
+A ++F PY+YI++ R +DI+ I++ DEAHNIE I + S+ I +
Sbjct: 222 NADIIFMPYNYILDAKSRKIQGIDIQNNIILFDEAHNIEKICEETASLQISSTDIAMCID 281
Query: 310 DVLLKLQMELEQVCSVNPMIYQPLIEMTQDLVG---------WIERRKA----TLAKREF 356
++ + ++ + + N + + + +D ++E KA ++ KR+
Sbjct: 282 EITVVMEDMAKDIEQQNNFLMENSENVQKDFTADDLCILKAMFLELEKAIDAISIVKRDE 341
Query: 357 QHFFSC-----WTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSV 411
F G L +E + + I+ T + T + L S +
Sbjct: 342 GDTFPGGYIFELLGKAQLIHGREQLVIEKLEKIVFYLTTTSTSPFTRKGNALQKFSDL-- 399
Query: 412 ITLEGLFSSLTYFFSRNGSHVSDY-----QLALQKYIKRD---------SKNPGGNWTHT 457
L+ FSS FS+ + Y QL K K++ SKN G
Sbjct: 400 --LKTAFSSDNSLFSK--EKIKQYYKVYIQLEEHKKSKQNDVWDKKKILSKNEG----KI 451
Query: 458 LSLWCLNPAVVFKDVA-ELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQV 516
++ WC +P + + + + +IILTSGTLSP+ F SELG+ LE H++ D Q+
Sbjct: 452 INYWCFSPGFSMQQLKNQGARAIILTSGTLSPLKPFISELGIPIEVQLENSHIVKED-QI 510
Query: 517 LTSVISTGPDNYPLNASYKTAD----------------------------GYKLMEKLCN 548
++S GPD Y LN+S+ T + Y +M+K
Sbjct: 511 CVGILSQGPDGYSLNSSFNTRNDPKYIRSLGQTIFNFSCLVPYGLLVFFPSYPIMKKCKE 570
Query: 549 RWRETGQWSRLNAKKP----LFVEPKGGSQED-FEIVLKHYYNSISQGSKCAVVRKKRVK 603
W+ TG W+++ +K ++++ +++D F V+ YY I S C
Sbjct: 571 EWQNTGLWTKIADRKVIIFNIYIKMIIYNKKDGFINVMNEYYEKIKDPS-CT-------- 621
Query: 604 REGNNDLNTIESQENANKKGASFLAVCRGKI---------------VVGIPFPNINDIQV 648
GA F+AVCRGK+ + G+PFP + D +V
Sbjct: 622 -------------------GAIFMAVCRGKVSEGLDFANANGRAVLITGLPFPPLKDPRV 662
Query: 649 SLKKKY-NDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEER 707
LK++Y + + K LSG +WY +A RA+NQAIGR IRH+ DYGAIIL D RF
Sbjct: 663 ILKQRYLEEIKKQDKEALSGQQWYQLEASRAVNQAIGRIIRHKNDYGAIILCDYRFDNPS 722
Query: 708 NRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
+ +S WLR IK + F ++ LK FFR
Sbjct: 723 FKKQLSAWLRPHIKNFTCFGIIVKELKGFFR 753
>gi|380006443|gb|AFD29612.1| RTEL1 [Schmidtea mediterranea]
Length = 1057
Score = 275 bits (703), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 232/815 (28%), Positives = 378/815 (46%), Gaps = 157/815 (19%)
Query: 19 HVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
++ G+ ++FP++PY Q+++M +VI +L +DG +A+LESPTGTGK+L LLC+ LAW
Sbjct: 5 NICGVSIDFPFEPYACQIIYMEKVIESL----KDGK-NAILESPTGTGKTLCLLCAALAW 59
Query: 79 QQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNV 138
Q + K ++ + D E + +NG + + + S Q+ ++ NV
Sbjct: 60 QDHVK------KVTTNSED-EILLHLNSNGNQYWNKLKKS-----------QLNISKINV 101
Query: 139 KKKMTPTIFYASRTHSQISQVISEYKKTAY-RVPMAVLASRKHYCTNKYVRDKENIDEE- 196
P I Y+SRTHSQ+SQ I+ K+T Y + ++ASR+ C N V + E+ +
Sbjct: 102 ----VPKIIYSSRTHSQLSQCINALKRTQYCDRKVGMIASREQLCINPKVMNLESNTAKI 157
Query: 197 --CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARS 254
CK + R C + K + S + ++ DIEDL+ +G+ C Y+ +R
Sbjct: 158 YGCKSRVKTRK--CFFYNQFEKAKEILSSET----KIADIEDLLTIGKKKSVCPYFLSRE 211
Query: 255 MADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLK 314
M D A + F PY+Y+++ IR +++KG I+I DEAHNIE + D+ SV + +
Sbjct: 212 MFDSADITFMPYNYLLDSKIRRLYNINLKGNIVIFDEAHNIEQVCEDSASVQLTS---IN 268
Query: 315 LQMELEQVCSVNPMIYQPLIEMTQDLVG---------------WIERRKATLAKREFQHF 359
+ +E++ + IY I+ T ++ I K L E F
Sbjct: 269 IASCIEELKVLGEFIYS--IQSTDAIIDEADNESRSDEIPDLTQIIHLKQNLCILE-SEF 325
Query: 360 FSCWTGDKALRELQ-EANISRQC-------------FPILLECATKAIKEATDTESELPH 405
S G+ A L E NI Q F LLE + I +++ P
Sbjct: 326 HSIDLGNNANAGLTVEVNILFQLLNRCGFKHSNKLHFIDLLEKCSSFIGMSSE-----PT 380
Query: 406 LSGMSVITLEGLFSSL-TYFFSRNGSHVSD-----------YQLALQK-YIKRDSKNPGG 452
L+ + LE + + T FF G Y++ +Q+ I ++N
Sbjct: 381 LTKHGIKGLEKVQEFMKTVFFDEIGEEFDSIDNLEKKLSACYRVFIQENEIATSNRNNKI 440
Query: 453 NW------------THTLSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQ 499
NW LS WC+ K +A + SIILTSGTL P+ + ++ ++
Sbjct: 441 NWGSNKNQAVNGDKNRVLSFWCMTAGRTMKSLAGCEVRSIILTSGTLYPIETLKLDMDIK 500
Query: 500 FGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTAD--------------------- 538
F L HVI+ D Q++ SV + G D PLN+SY T +
Sbjct: 501 FEVELRNSHVINAD-QMMVSVCTKGADGEPLNSSYLTREKISYTNSLGNSILNLSKIIPR 559
Query: 539 -------GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSIS-- 589
Y +M K RW ++ + K L VEP+ ++ F + ++ +Y+ S
Sbjct: 560 GLLVVFPSYGMMRKCIERWESCDIYNSMMQHKQLIVEPQDKTK--FTLAMEQFYSKNSDP 617
Query: 590 ---QGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDI 646
+GS V + ++ E + ++ +G RG IVVG+P+P++ D
Sbjct: 618 LSNKGSILLSVARGKIS----------EGLDLSDHQG-------RGVIVVGLPYPSMMDP 660
Query: 647 QVSLKKKY-NDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQE 705
++ LK + +D + K + G WY QA+RA+NQ+IGR IRH D+GAI L DERF
Sbjct: 661 RIRLKMSFLDDRLKLFKFGIDGRCWYKQQAYRAVNQSIGRVIRHSRDFGAIYLFDERFAT 720
Query: 706 ERNRAHISKWLRKSIKQYDSFDASLEGLKSFFRDV 740
+R + WL+ +I + F ++ +FFR++
Sbjct: 721 ADSRFQLPLWLQSNIVISNHFGDAIRNTCNFFRNI 755
>gi|440797062|gb|ELR18157.1| DNA repair helicase (rad3) subfamily protein [Acanthamoeba
castellanii str. Neff]
Length = 1026
Score = 275 bits (703), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 228/815 (27%), Positives = 351/815 (43%), Gaps = 204/815 (25%)
Query: 12 RKPLNAYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSL 71
++ + Y + G+ V FP+ Y S TGK+L L
Sbjct: 48 QREMQVYDIRGVPVGFPFNAYDS------------------------------TGKTLCL 77
Query: 72 LCSTLAWQQNCKLKNQLANISHSKPD-------TEAVTDPLANGGGFIPESQPSTIPPST 124
LC++LAW+Q L +Q +N + S D E L +GGG +P
Sbjct: 78 LCASLAWRQQW-LHSQ-SNSAQSAADFAAEWRSKEKPQSLLFSGGGDMPL---------- 125
Query: 125 NGQTAQVAMNNKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTN 184
V ++ P I Y SRTHSQ++QV+ E K+TAY M VL SR+ C N
Sbjct: 126 -------------VVREKPPRIIYTSRTHSQLTQVMKELKRTAYSPRMTVLGSRRQLCVN 172
Query: 185 KYVRDKENIDEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCH----------EVHDI 234
V + D +C+ L+ R C + + ++ L +G C+ E+ DI
Sbjct: 173 PDVVNTPGRDHKCRSLVTSRR--CDYYNRLDDLKKSEQL-RGSCNGMFGEEVAEGEITDI 229
Query: 235 EDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHN 294
E+L+ G+ C++Y AR + A ++F PY+Y+I+P IR ++ VD++GA++I DEAHN
Sbjct: 230 EELLQSGRDRGLCAFYLARELQYSADIIFAPYNYLIDPAIRRSLGVDLRGAVIIFDEAHN 289
Query: 295 IEDIARDAGSVDI---DEDVLLKLQMELEQVCSV----------NPMIYQPLIEMTQDLV 341
+E + D+ S D+ D V +K ELE+ + N M L+
Sbjct: 290 VESVCEDSASFDLRVADMKVAIK---ELERAAELAASPSYSGETNKDDITRFKGMVWALI 346
Query: 342 GWIERRKATLAKREFQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTES 401
I K ++ F GD L + +I+ + A+ D+ S
Sbjct: 347 NDIN--KVHVSGDGFTR-----PGDYIYELLNQVDINAD--------TSVALTNLCDSPS 391
Query: 402 ELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYI--KRDSKNPGG------N 453
+ G+ ++L+ L L F D+ L + ++ + + G N
Sbjct: 392 DEESGMGLKPLSLKSLNDCLKTLFKDGVDRREDFSLYYKIHVHDQASAAQRGAYRFQSRN 451
Query: 454 WTHTLSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDV 512
+S WC NP + ++A + +IILTSGTLSP+ S ++EL + F LE HVI
Sbjct: 452 AERVVSCWCFNPGLAMLELAAQGVRNIILTSGTLSPLASTAAELKIPFPIRLENSHVIQP 511
Query: 513 DLQVLTSVISTGPDNYPLNASYKTAD----------------------------GYKLME 544
QV V+S GP +YPLN+S+KT + Y +
Sbjct: 512 S-QVWVGVLSNGPSDYPLNSSFKTRETEDYKQALGNALINFMRIVPNGLLVFFPSYTALT 570
Query: 545 KLCNRWRETGQ-------WSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVV 597
+ W+ + W R+ K +EP+ Q F++ ++ YY
Sbjct: 571 TCVDAWKRPDEQARNGSIWERMCRYKQAIIEPREAFQ--FKLAMEDYY------------ 616
Query: 598 RKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKI---------------VVGIPFPN 642
+VK EG GA F AVCRGK+ + G+PFP+
Sbjct: 617 --AKVKTEG----------------GAVFFAVCRGKVSEGLDFSDDNGRAVVITGLPFPS 658
Query: 643 INDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDER 702
+ D +V K+ Y D R +L + QA RA+NQA+GR IRH D+GAIIL D+R
Sbjct: 659 LTDAKVKQKRSYLDHQR---QILGTSSL---QAMRAVNQAVGRVIRHSRDHGAIILADQR 712
Query: 703 FQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFF 737
F N++ +S WLR +K Y+ F + L FF
Sbjct: 713 FGMATNQSGLSLWLRPQVKVYNQFGVAALALTRFF 747
>gi|432094035|gb|ELK25827.1| Regulator of telomere elongation helicase 1 [Myotis davidii]
Length = 1389
Score = 275 bits (702), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 225/827 (27%), Positives = 361/827 (43%), Gaps = 178/827 (21%)
Query: 22 GIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQN 81
G+ V+FP+QPY Q +M +V+ L + + +LESPTGTGK+L LLCSTLAW+++
Sbjct: 8 GVTVDFPFQPYKCQEEYMAKVLECLQK-----KVNGVLESPTGTGKTLCLLCSTLAWREH 62
Query: 82 CKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKK 141
+ I+ + PL++ G E +
Sbjct: 63 LRDAISARKIAERTQGDLFLDRPLSSWGNAASE-------------------GDATACYA 103
Query: 142 MTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE---CK 198
P + YASRTHSQ++QVI E + T+YR + VL SR+ C + V+ +E+ + C+
Sbjct: 104 DIPKVIYASRTHSQLTQVIGELRNTSYRPRVCVLGSREQLCIHPEVKKQESNHMQIHLCR 163
Query: 199 LLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADD 258
+ R+ C + NV + SL++ + DIEDLV G + C YY +R++
Sbjct: 164 KKVASRS--CHFYNNVEE----KSLEQDLATPILDIEDLVKSGNRHKLCPYYLSRNLKQQ 217
Query: 259 AQLVFCPYSYIIN-------------------------PVI------------------- 274
A ++F PY+Y+++ PV+
Sbjct: 218 ADIIFMPYNYLLDAKGHRLTLPCVQRLVLHVVEAPWMCPVLQHRLGPRNHADSALCQAQV 277
Query: 275 --RGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDE-------DVLLKL---------- 315
R A +D+KG ++I DEAHN+E + ++ S D+ DVL ++
Sbjct: 278 SSRRAHGIDLKGTVVIFDEAHNVEKMCEESASFDLTPHDVASGLDVLDQILEEQSRAAQQ 337
Query: 316 -QMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWT--GDKALREL 372
++ LE N + L ++ + L + R + + E T G
Sbjct: 338 GELRLEFSADANSGLNMELEDIAK-LKMILLRLEGAIDAVELPGGDGGVTKPGSYIFELF 396
Query: 373 QEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHV 432
EA I+ Q +LE + I+ H +G L+ L + FS + +
Sbjct: 397 AEAQITLQTKGCILESLDQIIQHLAGRAGLFTHTAG-----LQKLADIIQMVFSTDPAEG 451
Query: 433 S-----DYQLALQKYIKRDSKNPG-----GNWTHT--------LSLWCLNPAVVFKDVAE 474
S + L+ + +I D+ + G W+ T LS WC +P +++
Sbjct: 452 SSPVGPEASLSYKVHIHPDTSHRGTAHRSDAWSSTASRRQGKVLSYWCFSPGCCMRELVR 511
Query: 475 LSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNAS 533
+ +++LTSGTL+P++SF+ E+ + F CLE PHVID Q+ ++ GPD L+++
Sbjct: 512 QGVRTLLLTSGTLAPVSSFALEMQIPFPVCLENPHVIDKH-QIWVGIVPRGPDGAQLSSA 570
Query: 534 YKTADGYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQE---DFEIVLKHYYNSISQ 590
+ D E L + + +R+ L P E +F V+ YY +++
Sbjct: 571 F---DKRFSDECLSSLGKALVNITRVVPHGLLVFFPSYPVLEKSLEFWRVMGAYYAAVA- 626
Query: 591 GSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGK---------------IV 635
+ +GA+FLAVCRGK +V
Sbjct: 627 ---------------------------SPGSRGAAFLAVCRGKASEGLDFADVNGRGVVV 659
Query: 636 VGIPFPNINDIQVSLKKKYNDTYR----SSKNLLSGNEWYCNQAFRALNQAIGRCIRHRF 691
G+P+P D +V LK ++ D + +S LSG +WY QA RA+NQAIGR IRHR
Sbjct: 660 TGLPYPPRKDPRVILKMQFLDEMKGRSGASGQFLSGQDWYRQQASRAMNQAIGRVIRHRH 719
Query: 692 DYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
DYGAI L D RF RA + W+R ++ Y+ F + + FFR
Sbjct: 720 DYGAIFLCDHRFTSADTRAQLPSWVRPHVQVYNHFGHVIRDVAQFFR 766
>gi|412990074|emb|CCO20716.1| predicted protein [Bathycoccus prasinos]
Length = 1018
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 195/651 (29%), Positives = 314/651 (48%), Gaps = 84/651 (12%)
Query: 144 PTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEECKLLLGD 203
P IF SRTHSQI+Q+ E K+ YR +VL SR+ +C K DEEC+ +
Sbjct: 389 PRIFLCSRTHSQIAQLARELKRCPYRPNFSVLGSRQQFCPAK------KTDEECQEM--- 439
Query: 204 RNLGCPQFKNVHKVRGHPSLQKGGCH--------EVHDIEDLVNVGQVVRGCSYYAARSM 255
GC + H + H + DIEDL + C++Y + +
Sbjct: 440 -TRGCVKAVPPHSTSSKCAYFNRQAHLLDEMRNAHIWDIEDLKYAAEEHEACTFYVTKEL 498
Query: 256 ADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKL 315
DA+ V CPY+YI + IR AM++D+ A +I+DE HNIED+ R+ SV++ E L +
Sbjct: 499 YKDAEFVLCPYNYIFDEGIRAAMDIDLTNAAIIIDEGHNIEDVCREGASVEVYEKDLERY 558
Query: 316 QMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWT---GDKALREL 372
E+ + P P+ + WI R+ ++EF + T + + EL
Sbjct: 559 LNEIGILVVTFPEAL-PVKNFLIQIAAWISRKMKQ--RQEFDRYKQTRTISDPNVIIEEL 615
Query: 373 QEANISRQCFPILLECATKAIKEATDTESELPHL---SGMSVITLEGL-----FSSLTYF 424
+A + + L+ K ++ T +S+ + G V + G+ + +
Sbjct: 616 WDALCNPKREEETLDSVLKKVQTITAKQSKTMQMISEQGEKVTGVLGMQAMRFANEIATK 675
Query: 425 FSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHT-----LSLWCLNPAVVFKDVAELSLSI 479
FS + +DY L + ++ NP H +LWCL PAV F+ VAE + +
Sbjct: 676 FSLFKKYSNDYVLCIAQFAHDAFSNPADKPKHDEKTGGFALWCLRPAVAFERVAEKARCV 735
Query: 480 ILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVD------LQVLTSVISTGPDNYPLNAS 533
ILTSGTLSP +S ELGV F ++APHV+ + L L ++ + + S
Sbjct: 736 ILTSGTLSPTSSLEGELGVPFPIKVDAPHVVPNNQIFVESLDTLGAITRRNLQSSGQDFS 795
Query: 534 YKTAD------------------GYKLMEKLCNRW-RETGQWSRLNAKKPLFVEPKGGSQ 574
+ D Y+L++++ + W TG ++++ K + E GGS+
Sbjct: 796 ARLGDMLLRYCKHIPGGVLVFLPSYELIQRISDEWFHTTGHHAQISKHKKIVFE-TGGSR 854
Query: 575 EDFEIVLKHYYNSI-SQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGK 633
F+ L+ + + + +GS V + + EG ++ ++NA R
Sbjct: 855 -GFDETLEDFRDGLKKKGSLLFAVFRGKCS-EG------LDFKDNA----------ARAV 896
Query: 634 IVVGIPFPNINDIQVSLKKKYNDT-YRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFD 692
+GIPFPN+ D++V+LKK++N + + + KNLL GN WY +QAFRA NQA+GRC+RH D
Sbjct: 897 FCIGIPFPNLGDVKVNLKKQFNSSAHGAQKNLLDGNRWYEHQAFRAYNQALGRCVRHLHD 956
Query: 693 YGAIILLDERFQEERNRAH-ISKWLRKSIKQYDSFDASLEGLKSFFRDVKG 742
Y AI L+D+RF R + ISKW+R ++ + S+ L FF+ ++
Sbjct: 957 YAAIFLVDQRFCHNRENINLISKWVRGRVRTSGGANESVGTLNEFFQTLRA 1007
Score = 59.7 bits (143), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 67/129 (51%), Gaps = 12/129 (9%)
Query: 16 NAYHVGGIQVEFP--YQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLC 73
N + + GI V FP P Q + M +V+ L Q HAL+ESPTGTGKSL+LLC
Sbjct: 158 NTFPMMGIPVAFPKGLTPLIPQKIVMSKVLQALKTKQ-----HALVESPTGTGKSLALLC 212
Query: 74 STLAWQQNCK--LKNQLANISHSKPDTEAVTDPLANGGG-FIPESQPSTIPPSTNGQTAQ 130
++LA+Q+ + + + A I + P+ + + D G F+ + T+ T G+ +
Sbjct: 213 ASLAFQKEMRRQIWEKRAKIG-AAPENKGLPDGWRTANGMFVGAKEAETVKMET-GEEVK 270
Query: 131 VAMNNKNVK 139
+N +K
Sbjct: 271 EDKDNARIK 279
>gi|209878272|ref|XP_002140577.1| DNA repair helicase family protein [Cryptosporidium muris RN66]
gi|209556183|gb|EEA06228.1| DNA repair helicase family protein [Cryptosporidium muris RN66]
Length = 1091
Score = 273 bits (698), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 255/906 (28%), Positives = 398/906 (43%), Gaps = 189/906 (20%)
Query: 15 LNAYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCS 74
LN Y + G V FPY+ Y Q+ +M +V+ +L + HALLESPTGTGK++ LL S
Sbjct: 5 LNVYTIDGYSVNFPYKAYDCQITYMEKVLYSLKHRK-----HALLESPTGTGKTMCLLAS 59
Query: 75 TLAWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMN 134
TLA+Q++C +K L ++ + + + E I S N N
Sbjct: 60 TLAFQRDCIVKYNLTRKLNNSCEVDRNLKTTGTSNLYEEEHTKIEIDKSYNLNEEHGDSN 119
Query: 135 NKNVKKK-MTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLAS----------RKHYCT 183
K K + + P I Y+SRTHSQ+SQV+ E + + ++ A+ + R+ T
Sbjct: 120 LKKQKSEFILPRIIYSSRTHSQLSQVMRELRSS--KIVEALWKNLNDLNIENSLRQDSPT 177
Query: 184 NKYVRDKENIDEECKL----LLGDRNLGCPQFKNVHKVRG-------HPSLQKGGCH--- 229
NK R+ + KL +LG R+ C K + K RG + ++G C
Sbjct: 178 NKKQRNTMK-NPGNKLFKATILGSRDQLCVHPK-ISKYRGSALVKNCRKTTKEGKCRYHN 235
Query: 230 ------------EVHDIEDLVNVGQVVRG--CSYYAARSMADDAQLVFCPYSYIINPVIR 275
++ DIEDL + G C +YA R +A+ ++ PY+Y+++ + R
Sbjct: 236 NLKQANMTGIAGDIEDIEDLKRIASTDSGYFCPFYATREIANICNVILLPYNYLLDSITR 295
Query: 276 GAMEVDIKGAILILDEAHNIEDIARDAGSVDI-DEDV-----------------LLK--- 314
+++D+ I+ILDEAHN+E +A +A S D+ D D+ LLK
Sbjct: 296 QNLKLDLNNTIIILDEAHNVESVAEEAYSYDLRDIDLALSQKAIQNMLEAARSGLLKERE 355
Query: 315 ---------LQMELEQVCSVNPMIYQPLIEMTQDLVGWI-----ERRKATLAKREFQHFF 360
+ ++E + +Y+ L ++ +D+ + ER ++ L E F
Sbjct: 356 SDKKEDDISISFDIEIAIHLATSVYE-LSKLIRDIPCKVPNNRNERIRSKLGDVEGTIF- 413
Query: 361 SCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVIT---LEGL 417
G + A + F + EC T I + LS +S IT L
Sbjct: 414 ---PGSYIHTLFKSAGFTIDKFQNMDECLTSMINFGQGLSGNISDLSSLSDITPIQLNAR 470
Query: 418 FSSLTYF-----FSRNGSHVSD---------YQLALQKYIKR----------DSKNPGGN 453
+L F + N VS+ Y+++ Q + D++ G
Sbjct: 471 IGALERFQRCLRLTFNTCAVSNPQWFKVYVHYEISQQNGLNSEESIDINRDIDTEYDGNY 530
Query: 454 WTHTLSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSEL---GVQFGTCLEAPHV 509
+ LS WC +PA + + S+I+TSGTLSP+++ + + F LE HV
Sbjct: 531 YNLCLSFWCFSPAAALTSLVSSGVRSLIVTSGTLSPLDTLAQQFSCANFSFEVFLENDHV 590
Query: 510 IDVDLQVLTSVISTG-PDNYPL---------NASYKTADG-------------------- 539
I+ + Q+ + I G P+N N +Y A G
Sbjct: 591 INGNEQLWVAAIEQGAPENKTQLIGSFESRSNPAYFEALGSTVLDSVKRIPGGVLLFFAS 650
Query: 540 YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRK 599
Y LM++ N W G R+ A K +FVEP+ + +L+ Y I SK V
Sbjct: 651 YTLMDQAINLWTIQGLMDRIKALKSVFVEPRNSYE--LNSILESYKGCIELKSKNNV--- 705
Query: 600 KRVKREGNNDLNTIESQENANKKGASF----LAVCRGKI---------------VVGIPF 640
+N L+ + N KK A+F +AVCRGKI + G+PF
Sbjct: 706 ------KSNSLDKLTDFTNITKKCANFGSLLIAVCRGKISEGIDFSDDTCRGVIIAGMPF 759
Query: 641 PNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLD 700
P+I D +V LKK+Y D YR + WY QA RA+NQA+GR +RHR DYGA+I D
Sbjct: 760 PSIADPRVCLKKQYMDEYR-----MDSRRWYNQQAIRAVNQAVGRVVRHRLDYGAVIFAD 814
Query: 701 ERFQEERNRAHISKWLRKSIKQYDSFDAS-LEGLKSFF-RDVKGWVGKKMFNGLENSDND 758
+RF R +SKWLR I+ + + + L + +FF RD+ K + N +DN
Sbjct: 815 KRFTHTNIRNQLSKWLRGYIRCLEYLNTTNLNSISTFFNRDLH---NKLIGNSNNLNDNK 871
Query: 759 VDHVSS 764
+D +S+
Sbjct: 872 LDLLSN 877
>gi|401415594|ref|XP_003872292.1| putative helicase [Leishmania mexicana MHOM/GT/2001/U1103]
gi|322488516|emb|CBZ23762.1| putative helicase [Leishmania mexicana MHOM/GT/2001/U1103]
Length = 953
Score = 272 bits (695), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 225/817 (27%), Positives = 341/817 (41%), Gaps = 203/817 (24%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
V GI V FP+ PY +Q+ FM V+ L + LLESPTGTGK+L LLCSTL W
Sbjct: 7 VNGITVSFPFDPYPAQVEFMRSVVKCLQHG-----FNGLLESPTGTGKTLCLLCSTLGW- 60
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVK 139
++Q A + H PS Q +
Sbjct: 61 --LAARSQGAVLRH----------------------------PSDQDQKG---------R 81
Query: 140 KKMTPTIFYASRTHSQISQVISEYKKTAYR--VPMAVLASRKHYCTNKYVRDKENIDEE- 196
K + + Y SRTH+Q++QV+ E K+T+Y MA+L SR+H C NK V + +
Sbjct: 82 GKYSHKVVYCSRTHAQLAQVVRELKRTSYAQCFTMAILGSREHMCLNKEVTRLPSSQAQH 141
Query: 197 --CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARS 254
C L +RN C F+ + SL C VHD+EDL+ G C Y+ R
Sbjct: 142 AMCSALRSERN--CRFFRGLQSAGAGASLLPPAC-AVHDMEDLMREGSRSGFCPYFHERD 198
Query: 255 MADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAG----------- 303
A DA +V PY+YI++P + + ++ ILI+DEAHN+ + +G
Sbjct: 199 AARDADVVLMPYNYILDPSLHKQLPFELANCILIVDEAHNLPSVLSSSGCQTLSPLDVTT 258
Query: 304 -----------------SVDIDEDVLLKLQMELEQVCSVNPMIYQPLIEMTQDLVGWIER 346
++DEDV ++ + EL + I +EM + E
Sbjct: 259 AIHDCSRAIAMHRLTAKKAELDEDVAVEEEQELASL-----KILLNRLEMCV----YAEP 309
Query: 347 RKATLAKREFQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHL 406
A G L++A I+R+ F A + +ES L
Sbjct: 310 MAEGTAASTPTQCAVVRDGSYMFAFLEKAFITREVF--------GAQSDGVTSESGLAGT 361
Query: 407 SGMSVITLEG----------LFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTH 456
G V L + LT F+ + +H+ + LQ+++
Sbjct: 362 MGKCVTLLADSERPATSMARVQEFLTCVFAFDMAHIDSTRFVLQQHLV------AAKAAR 415
Query: 457 TLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQV 516
TL W L+ + + V S++LTSGTLSP++ F++ELG++F L+ HVI D QV
Sbjct: 416 TLGFWELDNTRLMRQVVSPLHSVLLTSGTLSPLDQFAAELGMEFQVRLKGNHVIQPD-QV 474
Query: 517 LTSVISTGPDNYPLNAS--------YKTADG--------------------YKLMEKLCN 548
L V+ GP LN Y+ G Y M + +
Sbjct: 475 LGGVLCRGPSGEKLNGGFSFRSSVDYRVGLGMSLANIARNTPGGTLVFFPSYAAMNSVVD 534
Query: 549 RWRE-TGQ-------WSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKK 600
WR +G+ W L+ KP+FVEP + D +++ + +
Sbjct: 535 LWRAGSGRAGDTKTVWGMLSELKPIFVEPN--NTNDLPTIVQGFQKEV------------ 580
Query: 601 RVKREGNNDLNTIESQENANKKGASFLAVCRGKI---------------VVGIPFPNIND 645
+ + +GA LAVCRGKI V GIP+ N D
Sbjct: 581 ----------------DTSPLRGAILLAVCRGKISEGIDFADNHGRCVLVAGIPYANHTD 624
Query: 646 IQVSLKKKYNDTYRSSKNLL-----SGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLD 700
+ V LK++Y + + L+ +G++WY N+A RA+NQ +GR IRH+ DYG ++L D
Sbjct: 625 LFVRLKREYITSVAPQRPLVDGKPFTGDDWYRNEAMRAVNQCVGRVIRHKDDYGVVLLAD 684
Query: 701 ERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFF 737
ERF E +S+W+R+ + + F + + FF
Sbjct: 685 ERF--EGLLGSVSEWVRRRTRVFTDFRGAYAAVAQFF 719
>gi|322781255|gb|EFZ10173.1| hypothetical protein SINV_12884 [Solenopsis invicta]
Length = 884
Score = 269 bits (688), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 231/815 (28%), Positives = 373/815 (45%), Gaps = 170/815 (20%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ I V FP++PY QL +M +VI L +Q H +LESPTGTGK+LSLLCS+L+W
Sbjct: 6 INDIVVNFPFKPYPVQLEYMKKVIECLQNSQ-----HGVLESPTGTGKTLSLLCSSLSWL 60
Query: 80 --QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAM--NN 135
+ +L+ Q+ + K D GG F TNG V + N
Sbjct: 61 LTKKAQLQAQMIAGAIEKKDL---------GGHFFKHL--------TNGLEKAVGLPDNV 103
Query: 136 KNVKKKMTPTIFYASRTHSQISQVISEYKKTAYR-VPMAVLASRKHYCTNKYVRDKENID 194
++ M I YASRTHSQ+SQ + E K+T+Y+ V VL SR C + V + N
Sbjct: 104 QSFGWSMA-KIIYASRTHSQLSQAMHELKRTSYKHVATTVLGSRDQLCIHPEVSKETNTF 162
Query: 195 EECKLLLGD-RNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAAR 253
+ + ++ C + NV + P ++ EV DIEDLV +GQ + C Y+ +
Sbjct: 163 NKIHMCHSKVKSRTCFYYNNVEARKDDPVFKE----EVLDIEDLVKLGQKHKCCPYFLTK 218
Query: 254 SMADDAQLVFCPYSYIINPVIRGAMEVDIKGAI--------------------------- 286
+ +A +VF PY+Y+++P R + +D++ +
Sbjct: 219 ELKQNADIVFMPYNYLLDPKTRRSQGIDLQNTVVLLDEAHNVEKVCEEAASLQISSTDIA 278
Query: 287 LILDEAHNI-EDIAR--DAGSVDIDEDVLLKLQMELEQVCSVNPMIYQPLIEMTQDLVGW 343
+ +DE ++ +D+A+ D S D + ++ E +C + M + + +
Sbjct: 279 MCIDEVTSVMQDMAKNSDQQSFDFLSENNVQKDFTAEDLCLLKAMFLE-----LEKAIDS 333
Query: 344 IERRKATLAKREFQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESEL 403
IE + ++ + + G L++ ++ I++E K I T T +
Sbjct: 334 IELKNSSEG--------NTFPGGFIFELLEKVELTHGKEQIVIEKLEKIILYLTTTSTSP 385
Query: 404 PHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYI-----KRDSKN---PGGNWT 455
G ++ L ++ + H + + +I K++ KN T
Sbjct: 386 FARKGNALQKFSDLLRTVFNSGASIARHREKVKRCYKVHIQIEEQKKNYKNDVWESKKMT 445
Query: 456 HT----LSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVI 510
T +S WC +P + + E + S++LTSGTLSP+ SF SELG+ LE PH++
Sbjct: 446 KTDGKLISYWCFSPGFGMEQMVEQGIRSVVLTSGTLSPLKSFISELGIPIAVQLENPHIV 505
Query: 511 DVDLQVLTSVISTGPDNYPLNASYKTAD----------------------------GYKL 542
QV ++S GPDN+PLN+SY T + Y +
Sbjct: 506 -TKGQVCVGILSQGPDNHPLNSSYNTRNDPKYIASLGRTVYNFSCIVPHGLLIFFPSYPI 564
Query: 543 MEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRV 602
M+K + W+ G W+++ A++P S+E F V+ YY I S C
Sbjct: 565 MKKCRDEWQNMGLWTQI-AEQP-------NSKEGFVNVMNEYYQKIRDPS-C-------- 607
Query: 603 KREGNNDLNTIESQENANKKGASFLAVCRGKI---------------VVGIPFPNINDIQ 647
KGA F+AVCRGK+ ++G+PFP + D +
Sbjct: 608 -------------------KGAVFMAVCRGKVSEGLDFANANGRAVLIIGLPFPPLKDPR 648
Query: 648 VSLKKKYNDTYRSS-KNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEE 706
V LK++Y + +++ K L+G EWY +A RA+NQAIGR IRH+ DYGA+IL D RF+
Sbjct: 649 VMLKQRYLEEIKTTEKESLTGQEWYQLEASRAVNQAIGRIIRHKSDYGAVILCDCRFENP 708
Query: 707 RNRAHISKWLRKSIKQYDSFDASLEGLKSFFRDVK 741
+ +S WLR IK++ +F + L+ FF++ +
Sbjct: 709 NFKKQLSTWLRPYIKKFTNFGMITKELRDFFKNAE 743
>gi|402467806|gb|EJW03051.1| DNA repair helicase (rad3) [Edhazardia aedis USNM 41457]
Length = 704
Score = 269 bits (687), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 212/765 (27%), Positives = 351/765 (45%), Gaps = 126/765 (16%)
Query: 24 QVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCK 83
Q++ P++PY +Q + +++ ++ + +L+ESPTGTGK+ S+LCS L++ N K
Sbjct: 8 QLKMPFKPYEAQRITTSQILDSICTS-----TSSLIESPTGTGKTYSILCSVLSYLSNTK 62
Query: 84 LKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKKMT 143
S D+ D N NN+
Sbjct: 63 ----------SFKDSRDTKDSKEN--------------------------NNRK------ 80
Query: 144 PTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEECKLLLGD 203
P IF +RTH QISQ++ +K + +AVL+SR C N+ V+ + ++ C L+
Sbjct: 81 PKIFICTRTHKQISQMLDSLRKLSDVPQIAVLSSRTQLCINQIVKIASDRNDACLKLIKK 140
Query: 204 RNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVF 263
+N GC F+N SL + ++ DIE+L G+ + GC Y+A R + A ++F
Sbjct: 141 KN-GCKYFENTD------SLAQNLSSKIMDIEELAKAGKTMAGCPYFAMRKLQATADIIF 193
Query: 264 CPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQVC 323
PY+Y+++P IR ++ +++K A++I+DEAHNIED R AGS ++ + + E+++
Sbjct: 194 APYNYLVDPSIRASLNIELKNAVVIVDEAHNIEDFCRSAGSFQATSELFVIIIDEIKKKL 253
Query: 324 SVNPMIYQPLIEMTQDLVGWI--------------ERRKATLAKRE-FQHFFS----CWT 364
VN MI ++ Q + G++ K + K + + H FS +
Sbjct: 254 -VNGMIAPEIVAHLQTIRGFLLIFTQFPSKNGSAKHDMKGKIGKFDNYSHQFSNKHNFLS 312
Query: 365 GDKALRELQEANISRQCFPIL---------LECATKAIK--EATDTESELPHLSGMSVIT 413
DK + N S+ FP ++ + I+ E+ + + E+ L S+
Sbjct: 313 SDKKFSVQSQMNKSK-TFPQSKVSAKNNENVKTGREIIEFLESMNIKKEMVLLLKQSLNA 371
Query: 414 LEG-------------LFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSL 460
L L SSL Y H D A Q I S + +++
Sbjct: 372 LSDENYRDLISPSYIKLMSSLVYVLEHILFHSPDC-YAFQLKISETSS------SFSINF 424
Query: 461 WCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSV 520
W L+PAV+FK A + S+IL SGTL P S SELG F +EAPHVI D + S+
Sbjct: 425 WLLDPAVIFKPFACAAKSVILLSGTLKPFESLRSELGFSFKNAVEAPHVIK-DTNICVSI 483
Query: 521 ISTGPDNYPLNASYKTADGYKLMEKLCNRWRETGQWSRLNAKKP---LFVEPKGGSQEDF 577
I G L Y ++ ++ ++++ + + N K L P E+F
Sbjct: 484 IKKGHLGKELIGKYGDSESFEYLDQI----KHILLMIKKNLGKAGGILVFVPSYTFLENF 539
Query: 578 EI----VLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGK 633
+ + Y+ S S ++RK K++ + + +
Sbjct: 540 QKRSTNIENIYFESKSAAEFGKILRK--FKKDADTSVPICMCVYRGRAAEGMDFKDNHAR 597
Query: 634 IVV--GIPFPNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRF 691
+VV GIP+P D +V K+ YND + K G WY QAFRA+NQAIGR +RH+
Sbjct: 598 VVVALGIPYPAYKDPEVVSKRMYNDKNKEIK----GQMWYEFQAFRAVNQAIGRVVRHKN 653
Query: 692 DYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSF 736
D+GA++ LD R+ +N+ H+ KW++ ++K Y+S + + +F
Sbjct: 654 DWGAVVFLDSRYCWHKNQTHLPKWVKTNLKTYESVSSFINVFSAF 698
>gi|355717481|gb|AES05950.1| regulator of telomere elongation helicase 1 [Mustela putorius furo]
Length = 1114
Score = 269 bits (687), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 208/691 (30%), Positives = 318/691 (46%), Gaps = 144/691 (20%)
Query: 144 PTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE---CKLL 200
P I YASRTHSQ++Q I E + T+YR + VL SR+ C + V+ +E+ + C+
Sbjct: 26 PKIVYASRTHSQLTQAIGELRHTSYRPRVCVLGSREQLCIHPEVKKQESSHMQIHLCRKK 85
Query: 201 LGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQ 260
+ R+ C + NV + SL++ + DIEDLV G C YY +R++ A
Sbjct: 86 VASRS--CHFYNNVEEK----SLERELATTILDIEDLVRSGNKHSLCPYYLSRNLKQQAD 139
Query: 261 LVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDE-------DVLL 313
++F PY+Y+++ R A +D+KG ++I DEAHN+E + + S D+ DVL
Sbjct: 140 IIFMPYNYLLDAKSRRAHGIDLKGTVVIFDEAHNVEKMCEETASFDLTPHDLASGLDVLD 199
Query: 314 KL-----------QMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSC 362
+L ++ ++ + +P ++ L ++ + L + R + + E S
Sbjct: 200 QLLEEQTKAAQQGELHVDFSTAADPGLHLELQDIAK-LKTILLRLEGAIDAVELPGNHSG 258
Query: 363 WT--GDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSG-----MSVITLE 415
T G EA I+ Q +L+ + I+ HL+G S L+
Sbjct: 259 VTKPGSYIFELFAEAQITLQTKGCILDSLDQIIQ----------HLAGRAGPWTSTAGLQ 308
Query: 416 GLFSSLTYFFSRN------GSHVS-----DYQLALQKYIKRDSKNPGGN-WTHT------ 457
L + F+ + GS V Y++ + + K + W T
Sbjct: 309 KLSDIIQIVFTADPAEGVPGSMVGPGVSQSYKVHIHPDVGHQRKAQRSDAWNSTAARKQG 368
Query: 458 --LSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDL 514
LS WC +P +++ + S+ILTSGTL+P++S + E+ + F CLE PHVI
Sbjct: 369 KVLSYWCFSPGHSMQELVRQGVRSVILTSGTLAPVSSLALEMQIPFPVCLENPHVISKQ- 427
Query: 515 QVLTSVISTGPDNYPLNASY--KTAD--------------------------GYKLMEKL 546
Q+ ++ GPD L++++ + +D Y +MEK
Sbjct: 428 QIWVGIVPKGPDGAQLSSAFDKRFSDVCLSSLGKALGNIARVVPHGLLVFFPSYPVMEKS 487
Query: 547 CNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREG 606
WR +L A KP+FVEP+ S+ F V+ YY K+V G
Sbjct: 488 LEFWRAHDFARKLEALKPVFVEPR--SKGGFSEVVGAYY--------------KQVAAPG 531
Query: 607 NNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLK 651
++ GASFLAVCRGK IV G+P+P D +V LK
Sbjct: 532 SS--------------GASFLAVCRGKASEGLDFADMNGRGVIVTGLPYPPRTDPRVVLK 577
Query: 652 KKYNDTYRS----SKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEER 707
++ D +S LLSG+EWY QA RA+NQAIGR IRHR DYGAI L D RF +
Sbjct: 578 MQFLDELKSLGGPGGQLLSGHEWYRQQASRAVNQAIGRVIRHRHDYGAIFLCDHRFTQPD 637
Query: 708 NRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
RA + W+R +K YDSF + + FFR
Sbjct: 638 ARAQLPSWVRPHVKVYDSFGHIIRDVAQFFR 668
>gi|389594205|ref|XP_003722349.1| putative helicase [Leishmania major strain Friedlin]
gi|321438847|emb|CBZ12607.1| putative helicase [Leishmania major strain Friedlin]
Length = 953
Score = 269 bits (687), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 231/832 (27%), Positives = 352/832 (42%), Gaps = 233/832 (28%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
V GI V FP+ PY +Q+ FM V+ L + LLESPTGTGK+L LLCSTL W
Sbjct: 7 VSGITVSFPFDPYPAQVEFMRSVVKCLQNG-----FNGLLESPTGTGKTLCLLCSTLGW- 60
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVK 139
+Q A + H+ S Q + N+K
Sbjct: 61 --LSATSQGAVLRHA----------------------------SDQDQKGRGKHNHK--- 87
Query: 140 KKMTPTIFYASRTHSQISQVISEYKKTAY--RVPMAVLASRKHYCTNKYVRDKENIDEE- 196
+ Y SRTH+Q++QV+ E K+T+Y R MAVL SR+H C NK V + +
Sbjct: 88 ------VVYCSRTHAQLTQVVRELKRTSYAQRFTMAVLGSREHMCLNKEVTRLPSSQAQH 141
Query: 197 --CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARS 254
C L +RN C F + SL C VHD+EDL+ G C Y+ R
Sbjct: 142 AMCSALRLERN--CRFFSGLQSAAAGASLLPPEC-AVHDMEDLMREGSRSGFCPYFHERD 198
Query: 255 MADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAG----------- 303
A DA +V PY+Y+++P + + ++ ILI+DEAHN+ + +G
Sbjct: 199 AAKDADVVLMPYNYVLDPSLHKQLPFELANCILIVDEAHNLPSVLSSSGCQTLSPLEVTT 258
Query: 304 -----------------SVDIDEDVLLKLQMELEQVC----SVNPMIY-QPLIEMTQ--- 338
++DED+ + ++EL + + +Y +P+ E T
Sbjct: 259 AIHDCSRAIAMHRITTKKAELDEDMAAEEELELASLKILLRRLEMCVYAEPMAEGTATPT 318
Query: 339 ----DLVGWIERRKATLAKREFQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIK 394
D+V R+ + F+ L++A I+R+ F + + T A
Sbjct: 319 PTQCDVV------------RDGSYMFAF---------LEKALITREVFGVQSDGVTSASG 357
Query: 395 EATD--------TESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRD 446
A +SE P S V LT F+ + +H+ + LQ+++
Sbjct: 358 LAGTMGKCVTLLADSERPATSMARVQEF------LTRVFAFDMAHLDSTRFVLQQHLV-- 409
Query: 447 SKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEA 506
TL W L+ + + V S++LTSGTLSP++ F++ELG++F L+
Sbjct: 410 ----AAKAARTLGFWELDNTRLMRQVVSPLHSVLLTSGTLSPLDQFAAELGMEFQVRLKG 465
Query: 507 PHVIDVDLQVLTSVISTGPDNYPLNA--SYKTADGYKL---------------------- 542
HVI D QVL V+ GP LN S++++ Y++
Sbjct: 466 KHVIQAD-QVLGGVLCRGPSGEKLNGGFSFRSSVDYRVGLGMSLANIARNTPGGTLVFFP 524
Query: 543 ----MEKLCNRWRE-TGQ-------WSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQ 590
M + WR +G+ W L+ KP+FVEP
Sbjct: 525 SYASMNSVVELWRAGSGRAGDTKTVWGMLSELKPIFVEPNN------------------- 565
Query: 591 GSKCAVVRKKRVKREGNNDLNTI-----ESQENANKKGASFLAVCRGKI----------- 634
+NDL TI + + + +GA LAVCRGKI
Sbjct: 566 ----------------SNDLPTIVQGFQKEVDTSPLRGAILLAVCRGKISEGIDFADNHG 609
Query: 635 ----VVGIPFPNINDIQVSLKKKYNDTYRSSKNLL-----SGNEWYCNQAFRALNQAIGR 685
V GIP+ N D+ V LK+ Y + + L+ +G++WY N+A RA+NQ +GR
Sbjct: 610 RCVLVAGIPYANHTDLFVRLKRDYITSVAPQRPLVHGKPFTGDDWYRNEAMRAVNQCVGR 669
Query: 686 CIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFF 737
IRH+ DYG ++L DERF E +S+W+R+ + + F + + FF
Sbjct: 670 VIRHKDDYGVVLLADERF--EGLLESVSEWVRRRTRVFSDFRGAYAAVAQFF 719
>gi|452820691|gb|EME27730.1| DNA excision repair protein ERCC-2 [Galdieria sulphuraria]
Length = 777
Score = 267 bits (683), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 225/782 (28%), Positives = 355/782 (45%), Gaps = 106/782 (13%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ G++V FP+QPY Q +M +VI L +Q HA+LESPTGTGK+L LLCSTLAW+
Sbjct: 4 ILGVEVAFPFQPYPVQRDYMEKVIQALQTSQ-----HAMLESPTGTGKTLCLLCSTLAWR 58
Query: 80 QNCKLKNQLANIS--------HSKPDT-EAVTDPLANGGGFIPESQPSTIPPSTNGQTAQ 130
Q+ K QL+ IS HS + + + L+ G + +T Q
Sbjct: 59 QSFIAKCQLSTISKGQSSSLHHSDAEFFQGLESSLSRAVGKENQRALENDDGATLDDLFQ 118
Query: 131 VAMNNKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTN---KYV 187
N+ ++ TP I Y SRTHSQ++Q I + +KT YR + VL SR+ C + ++
Sbjct: 119 SLGGNQGIQP--TPRIIYTSRTHSQLAQAIDQLRKTIYRPSVIVLGSREQLCIHPQVSHL 176
Query: 188 RDKENIDEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGC 247
R E + C+ L + GC N+ + + E+ D+ED VN G+ C
Sbjct: 177 RGSEQ-NRLCRSLCESK--GCKYRNNLKNFYKYEKM----ADEILDLEDWVNFGKKEEIC 229
Query: 248 SYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDI 307
YY A+ ++L+F PY+Y+++ +R ++ +D I++ DEAH+IEDIA + S ++
Sbjct: 230 PYYLAKEREPTSELIFLPYNYLVDLHLRESLRMDFSNDIILFDEAHHIEDIAANCASFEL 289
Query: 308 DEDVLLKLQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDK 367
+L +L++V S + + + +QD V + + H + +
Sbjct: 290 TTSLLDACIHQLQRVKSKGDNL-SSIQQYSQDAVS-LLLALFRTLLNDMHHLLDGVSAHE 347
Query: 368 ALRE-------LQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVITLEGLFSS 420
+ E L + N++ + F ++K + D S+ + + +F+
Sbjct: 348 LVYEPSFLFQLLSKVNLTPKTFDAF---SSKIEQLFGDQHSDFESSVDFQSSSNDAVFTF 404
Query: 421 LTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSII 480
L Y + +L+ I + K TLS WC NP VV K + + ++
Sbjct: 405 LKYMRLLFKLSEEEARLSYVVCIYGEQKTEETRRRITLSYWCFNPGVVMKQLVKGVRCLV 464
Query: 481 LTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTAD-- 538
LTSGTLSP++ SEL + F LE H+I Q+ ++ GP LN+SY+
Sbjct: 465 LTSGTLSPLSFLESELQIPFPIQLENRHIISQH-QLFVGMLGLGPSGEVLNSSYRNRSLI 523
Query: 539 --------------------------GYKLMEKLCNRWRETGQ------------WSRLN 560
Y+L+ W+ W +
Sbjct: 524 SYKRELGRCIYNFSLVIPGGMLVFFPSYQLLMDCVEYWKTYSMQTSDQSKDFVSIWDSIY 583
Query: 561 AKKPLFVEPKGGSQEDFEIVLKHYYNSI-SQGSKCAVVRKKRVKREGNNDLNTIESQENA 619
+K L VE K +++F+ +HY + S+ S C + R + D S E A
Sbjct: 584 RRKSLVVESK--EEKEFQESFRHYQEQVDSRASGCILFGVCRGRMSEGIDF----SDEYA 637
Query: 620 NKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRAL 679
R I+VGIPFP + +V +K+ Y T + KN + WY +A RA+
Sbjct: 638 -----------RAVILVGIPFPPLQQRKVKMKQHYLSTVK--KN--NPQRWYRLEALRAM 682
Query: 680 NQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQ--YDSFDASLEGLKSFF 737
NQAIGR IRH D+GAIIL DERF + +S W++ +K Y SF A L FF
Sbjct: 683 NQAIGRVIRHEKDFGAIILCDERFPSMVHE--LSLWVQPFVKNGCY-SFGALQSELIRFF 739
Query: 738 RD 739
++
Sbjct: 740 KN 741
>gi|357622566|gb|EHJ73993.1| fanconi anemia group J protein [Danaus plexippus]
Length = 950
Score = 267 bits (682), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 241/832 (28%), Positives = 381/832 (45%), Gaps = 205/832 (24%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW- 78
+ GI V FP++PY Q +M +VI +L + +A+LESPTGTGK+LSLLCS+LAW
Sbjct: 6 IYGIPVTFPFEPYEVQKSYMEKVIESLQ-----NNTNAVLESPTGTGKTLSLLCSSLAWL 60
Query: 79 ---QQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNN 135
+ ++ QL N S + A+ D L + G +
Sbjct: 61 LVKKAQLQMNAQLGNFSEHSGYSNALRDNLKSNAG-----------------------KS 97
Query: 136 KNVKKKMTPTIFYASRTHSQISQVISEYKKTAYR-VPMAVLASRKHYCTNKYV-RDKENI 193
K+ P I Y+SRTHSQ++Q + E K+++YR V AVL SR C + V ++ N+
Sbjct: 98 KDNTSWGMPKIIYSSRTHSQLTQAMQELKRSSYRHVKAAVLGSRDQMCIHPEVSKETNNM 157
Query: 194 DE--ECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYA 251
++ C+L + R C + NV + S+ KG ++ DIEDLV+VG+
Sbjct: 158 NKVHMCQLKVKSRT--CHFYNNVESKKDDRSV-KG--DDILDIEDLVSVGK--------- 203
Query: 252 ARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDI-DED 310
+L CPY Y+ + E+ I+ + + ++ +R A V++ +
Sbjct: 204 --------KLKCCPY-YL-------SKELKQDADIIFMPYNYLLDPKSRRANGVELMNNI 247
Query: 311 VLLKLQMELEQVC--SVNPMIYQPLIEMTQDLVGWI-------ERRKATLAKREFQHFFS 361
++L +E++C S + I + + D + +I E TL + + F +
Sbjct: 248 IILDEAHNVEKMCEESASLQIRTTDVALCIDEITYIMKSFADGEDLDVTLDPNQPKDF-T 306
Query: 362 C----------WTGDKALRELQEANISRQCFP--ILLECATKAIKEATD---------TE 400
C +KA+ E+Q + FP + E +KA E TD E
Sbjct: 307 CDDLCTLKEMMLAFEKAVDEIQVGS-EGSTFPGGYIFELLSKA--EITDRNQMSVIGLIE 363
Query: 401 SELPHLSGMSV-------ITLEGLFSSLTYFFSRNGSHVSD-------YQLALQKYIKRD 446
+ + +LS S + L+ + L FS G+ V+ Y++ +Q K++
Sbjct: 364 NLIQYLSTASSSPFTRKGVGLQKIVDLLNVVFS--GTTVAYKERVKLCYKVHVQVEDKKN 421
Query: 447 SKNPGGNW-----------THTLSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSS 494
+K +W LS WC +P K + E ++ SIILTSGTL+P+ S
Sbjct: 422 NKK-TDSWGALKASNTKSAERVLSYWCFSPGFGMKQLLEQNVRSIILTSGTLAPLKPLIS 480
Query: 495 ELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYK------------------- 535
ELG+ G LE PH++ + Q+ +I GPD+ LN++Y+
Sbjct: 481 ELGIPIGVQLENPHIVKSN-QIHVKIIGQGPDSETLNSNYQNRNNPKYISSLGRTILSFS 539
Query: 536 --TADG-------YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYN 586
DG Y +M K W+ G WS +N+ KP+FVEP+ ++ F ++ YY+
Sbjct: 540 RVIPDGLLVFFPSYPIMTKCQEMWQAEGIWSSINSIKPIFVEPQ--RKDTFNSIINDYYS 597
Query: 587 SISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGK------------- 633
I + N +GA F+AVCRGK
Sbjct: 598 KI----------------------------RDPNSRGACFMAVCRGKVSEGLDFADMNGR 629
Query: 634 --IVVGIPFPNINDIQVSLKKKYNDTYR-SSKNLLSGNEWYCNQAFRALNQAIGRCIRHR 690
I+ G+PFP + D ++ LKKKY + R + K LSG+EWY +A RA+NQAIGR IRH+
Sbjct: 630 AVIITGLPFPPLKDPRIILKKKYLEELRVNQKEYLSGDEWYSLEASRAVNQAIGRVIRHQ 689
Query: 691 FDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFRDVKG 742
DYGAI+L D RF + + +S WLR I + F ++ + FF++ +
Sbjct: 690 NDYGAILLCDTRFNNPKLKNQLSAWLRDHIVVSNKFGLTVSEICRFFKNAEA 741
>gi|341883785|gb|EGT39720.1| hypothetical protein CAEBREN_25454 [Caenorhabditis brenneri]
Length = 810
Score = 267 bits (682), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 231/830 (27%), Positives = 355/830 (42%), Gaps = 198/830 (23%)
Query: 25 VEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCKL 84
V+FP++PY Q +FM VI LD A LESPTGTGK+LSLLCSTLAW K
Sbjct: 22 VKFPFEPYECQRIFMKNVIDVLD-----SKLDAALESPTGTGKTLSLLCSTLAWVNREK- 75
Query: 85 KNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKKMTP 144
+KP A GG A +KK P
Sbjct: 76 --------ETKPLDFATWQTSGAGG----------------------AGTEDKLKKTFIP 105
Query: 145 TIFYASRTHSQISQVISEYKKTAYR-VPMAVLASRKHYCTNKYVRDKENIDEE---CKLL 200
TIFYASRTHSQ+ QV+ E +T Y+ V +L SR+H+C N+ V+ + + + C+ L
Sbjct: 106 TIFYASRTHSQLEQVVHELNRTEYKWVKTTILGSREHFCINQKVKKIKESNRQAHVCRGL 165
Query: 201 LGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQ 260
+ R+ C + E DIED V +G C YY +R ++ A+
Sbjct: 166 VSKRS--CHYHNKFDACTTDKMTEILDTGEAMDIEDFVKLGTQNSICPYYMSRQRSETAE 223
Query: 261 LVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVD-------------- 306
L+ PY+YII+P +R ++D+K +I+I DEAHN+E I S +
Sbjct: 224 LILLPYNYIIDPKMRRRYKLDLKNSIVIFDEAHNLESICESNASTELSSTSIALCIEELK 283
Query: 307 ------IDEDVLLKLQME--LEQVCSVNPMIYQPLIE--MTQDLVGWIERRKATLAKREF 356
+DE+ + + + +E S + + LIE T+DL+ +E K L + E
Sbjct: 284 KVLALLVDEEETARTEADGCMEAFGSQKIDLTKRLIENLKTEDLMALLE--KVFLLEEEI 341
Query: 357 QHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVITL-- 414
F DK L+ + + +LLE +A + E + L L
Sbjct: 342 DKLFE---SDK-LKNIPPLDGKASDGEVLLEVLARAGFDGNSVERFVDVLRDAISYLLSK 397
Query: 415 ----------EGLFSSLTYFFSRNGSHVSDYQLAL--------------------QKYIK 444
+G+ + + S +H + A+ + YIK
Sbjct: 398 NEEVSLTEKGDGMETLADFLLSIYSTHAQEIAAAVGDESVKLVDRIDLKTVANNCKLYIK 457
Query: 445 RDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTC 503
++ G+ T+ +C ++ + + + +++L SGTLSP+ +F+ +G+ FG+
Sbjct: 458 KEE----GSGKLTIKYFCFQASISMRMLKMRGVRNVLLASGTLSPIQAFTYNMGLNFGSI 513
Query: 504 LEAPHVIDVDLQVLTSVIS-------TGPDNYPLNASYKTADG----------------- 539
LE H + + VLTS+++ TG N Y T G
Sbjct: 514 LENEHALK-QVPVLTSIVTRGKRGGLTGSFQNRKNIDYVTDVGESLIRVMESTPQGILVF 572
Query: 540 ---YKLMEKLCNRWRETGQ--------WSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSI 588
Y M++L W+ T + W R+ K + VEP+ ++E+ V Y +
Sbjct: 573 FSSYSQMDELVATWKTTKRPNDSLETLWERMEKSKKVVVEPR--AKEELAAVRLRYTQGV 630
Query: 589 SQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGK--------------- 633
S+ GA+ LAVCRGK
Sbjct: 631 SE------------------------------PHGAALLAVCRGKVSEGIDFCDAESRAV 660
Query: 634 IVVGIPFPNINDIQVSLKKKYNDTYRSSKNLL----SGNEWYCNQAFRALNQAIGRCIRH 689
I+VGIP+P I+D +V LKK Y D K+ S +WY +AFRA+NQAIGR +RH
Sbjct: 661 IIVGIPYPPIHDERVVLKKMYLDDLMGRKDKTHERQSSQDWYQMEAFRAVNQAIGRVLRH 720
Query: 690 RFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFRD 739
+ D+G ++LLD R+ + KWLR +I + DS +L + FF++
Sbjct: 721 KNDFGTVVLLDTRYASAKPEM-FPKWLRSTISRIDSDGCALRTAR-FFKE 768
>gi|323454890|gb|EGB10759.1| hypothetical protein AURANDRAFT_62227 [Aureococcus anophagefferens]
Length = 1120
Score = 267 bits (682), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 214/786 (27%), Positives = 338/786 (43%), Gaps = 147/786 (18%)
Query: 25 VEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCKL 84
VEFP+ PY QL FM + + +D A+LESPTGTGK+L LL STLAW +
Sbjct: 122 VEFPFDPYACQLDFMDKALGAVD-----AGTSAILESPTGTGKTLCLLVSTLAWAKR-HA 175
Query: 85 KNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKKMTP 144
Q A H P PP
Sbjct: 176 PAQTAKADHGGP------------------------PPERR------------------- 192
Query: 145 TIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENI--DEECKLLLG 202
+ YASRTH+Q+SQ + + ++Y +AV+ SR+H C + V+ ++ C+ L
Sbjct: 193 AVVYASRTHAQLSQAVKALRASSYAPRVAVIGSREHLCGHSVVKRLRGTAQNKACRALCA 252
Query: 203 DRNLGCPQFKNVHK-VRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQL 261
R GC + K ++ G DIE+LV+ G+ C+Y+ AR+ DA L
Sbjct: 253 AR--GCSLRNELDKQLKARKGEDFGDV--ALDIEELVDDGKRRGTCAYFGARANLKDADL 308
Query: 262 VFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQ 321
VF PY+Y+++ R +D +G I++LDEAHN+ +A DA S ++ + EL+
Sbjct: 309 VFAPYNYVLDERHRATSGIDWRGTIVVLDEAHNVASVAEDAASFELTAADVGGAARELDH 368
Query: 322 -VCSVNPMIYQPLIEMTQDLV--------GWIERRKATLAKREFQHFFSCWT----GDKA 368
V ++ M + ++ + G ++ ++ L + +C T G A
Sbjct: 369 CVDALGRMQLKASLDAKDGGLDAELPSEEGLLQLKRVVLGLEDALGRVACPTKDPEGGAA 428
Query: 369 LRELQEANISRQCF-PILLECATKA------IKEATD------------TESELPHLSGM 409
E + + P L CA A ++ A D ++L L
Sbjct: 429 YLEDRGGRLHELVLHPAGLTCAAAAEWFASGLRGAADVLAGDGDEASKNASAKLELLERA 488
Query: 410 SVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVF 469
+ + G S G D + Y + GG+ L WC +P +
Sbjct: 489 TRLAFRGQLSVPGADAPPAGG--DDAKELGDAYYRVHVSEGGGDAPAALCYWCFSPGLAV 546
Query: 470 KDVAEL-SLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNY 528
++ L + S++ SGTLSP+ SF++ELG++ + LE PHVID Q+ +V+ P
Sbjct: 547 SELLALGARSLLFASGTLSPLPSFAAELGLRKPSVLENPHVIDAATQLYAAVVGVAPSAR 606
Query: 529 PLNAS--------YKTADG---------------------YKLMEKLCNRWRETGQWSRL 559
PL ++ YK G Y M+ + W+ TG +
Sbjct: 607 PLKSTWAVRSRPEYKADLGAVVARVAAAVPRGGVLVFFPSYGAMDDALSAWKRTGVLDDI 666
Query: 560 NAK--KPLFVEPKGGSQEDFEIVLKHY----YNSISQGSKCAVVRKKRVKREGNNDLNTI 613
+ K + EP+ D + V++ + AV R K
Sbjct: 667 ERRSGKVVLSEPR--KAADMKAVIRSFDAAAAPGAPGALLLAVCRGK-----------VS 713
Query: 614 ESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKY-NDTYRSSKNLLSGNEWYC 672
E + A+ + CR +V G+P+ D +V K+ + +D R +++ LSG WY
Sbjct: 714 EGMDFADDR-------CRCVVVTGLPYAPARDRKVRGKRSFLDDKKRQNRDGLSGGAWYD 766
Query: 673 NQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEG 732
QA RA+NQA+GR IRH+ D+GA++L DERF RA +SKW+ S+K +F + +G
Sbjct: 767 QQAARAVNQALGRAIRHKGDFGAVLLCDERFASRGKRAMLSKWIDDSLKTPATFQEAEDG 826
Query: 733 LKSFFR 738
L++FFR
Sbjct: 827 LRAFFR 832
>gi|110741966|dbj|BAE98923.1| hypothetical protein [Arabidopsis thaliana]
Length = 652
Score = 266 bits (679), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 213/680 (31%), Positives = 321/680 (47%), Gaps = 101/680 (14%)
Query: 18 YHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLA 77
Y + GI VEFP++ Y SQ+++M RVI +L CHALLESPTGTGK+L LLC+TLA
Sbjct: 4 YSIRGINVEFPFEAYQSQIIYMDRVIESLQ-----NKCHALLESPTGTGKTLCLLCATLA 58
Query: 78 WQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKN 137
W+++ L + S K + + S IP S + + +
Sbjct: 59 WRKS------LGSFSTRK------------------DRKNSAIPWSDSDEPLS---QSGG 91
Query: 138 VKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRD--KENIDE 195
PTI YASRTHSQ+ QVI E K+++YR M VL SR+ C N+ V + +
Sbjct: 92 GGGGAFPTIVYASRTHSQLRQVIKELKRSSYRPKMVVLGSREQLCVNEEVNSLRGKALTN 151
Query: 196 ECKLLLGDRN-LGCPQFKNVHKVRGHPSLQKGGCH---EVHDIEDLVNVGQVVRGCSYYA 251
C+ L R C F + P K H E DIEDLVN+G+ C YY
Sbjct: 152 ACQYLCKKRGKRQCNHFNRL------PDYLKHNPHIGDEPVDIEDLVNIGKDSGPCPYYI 205
Query: 252 ARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDV 311
R + D ++F PY+Y+I+ R ++V+ ++LI DEAHN+E + D+ S D+ V
Sbjct: 206 TRELHKDVDIIFAPYNYLISNGYRKFLKVNWTNSVLIFDEAHNLESLCADSASFDL-PSV 264
Query: 312 LLKLQMELEQVC--------------SVNP---MIYQPLIEMTQDLVGWIERRKATLAKR 354
LL + Q C S+NP I + L+ Q+L+ K + KR
Sbjct: 265 LLSACISEAQECVQLAAARRDSLNDVSINPENFAILKGLLLKLQELIS-----KVPIPKR 319
Query: 355 EFQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVITL 414
+ + F G L+ NI+ + P L+ +A A E E + + L
Sbjct: 320 D-EGFTK--PGPYIYEMLKSLNITHETAPKLIGTVEEA---AVFLEEEKQRTATNAGSKL 373
Query: 415 EGLFSSLTYFFSRNGS-HVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVA 473
E + L F NGS H Y++ +Q+ + + G + TLS WC +P + D+A
Sbjct: 374 EIIADMLKLIFRENGSNHADVYRVHVQELEQNSTDVMKGKVSRTLSWWCFSPGITMLDIA 433
Query: 474 ELSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNA 532
+ + SIILTSGTLSPM+S + EL + F LE PHVI + Q+ V+STGP Y LN+
Sbjct: 434 QKGVGSIILTSGTLSPMDSLAQELKLDFPIRLENPHVISSN-QLWAGVVSTGPSGYVLNS 492
Query: 533 SYKTADGYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKH--YYNSISQ 590
SY+ D + ++L N +SR+ + L P + K+ Y NS++
Sbjct: 493 SYRNRDVPEYKQELGN---AIVNFSRVVPEGLLIFFPSYYLMDSCITFWKNGCYRNSMTV 549
Query: 591 GSKCAVVRKKRVKREGNNDLNTI-----ESQENANKKGASFLAVCRGK------------ 633
+ ++K ++ + ++ E ++ G F AVCRGK
Sbjct: 550 WERICKLKKPVIEPKDSSLFPAAMRDFSEKLQDRATSGVVFFAVCRGKVSEGLDFADGAG 609
Query: 634 ---IVVGIPFPNINDIQVSL 650
++ G+P+ + D +V L
Sbjct: 610 RAVVITGLPYARVTDPRVCL 629
>gi|350590580|ref|XP_003483097.1| PREDICTED: Fanconi anemia group J protein-like [Sus scrofa]
Length = 801
Score = 265 bits (678), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 151/439 (34%), Positives = 235/439 (53%), Gaps = 34/439 (7%)
Query: 140 KKMTPTIFYASRTHSQISQVISEYKKTAYR-VPMAVLASRKHYCTNKYVRDKENIDEECK 198
K P I++ +RTH QI+Q+ E ++TAY VPM +L+SR H C + V N E C
Sbjct: 240 KSKIPKIYFGTRTHKQIAQITRELRRTAYSGVPMTILSSRDHTCVHPEVVGNFNRKENCM 299
Query: 199 LLLGDRN-LGCPQFKNVHKVRGHPSLQ--KGGCHEVHDIEDLVNVGQVVRGCSYYAARSM 255
LL RN C + +HK+ +LQ G C + DIE+LV +G+ ++ C YY AR +
Sbjct: 300 ELLDGRNGKSCYLYHGIHKISDQRTLQTLHGMC-KAWDIEELVTLGKKIKACPYYTAREL 358
Query: 256 ADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKL 315
DA ++FCPY+Y+++ IR +ME+++K ++ILDEAHNIED AR++ S + E L
Sbjct: 359 MQDADIIFCPYNYLLDVQIRESMEINLKEQVVILDEAHNIEDCARESASYSVTEVQLRFA 418
Query: 316 QMELEQVC--SVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRELQ 373
+ EL+ + ++ ++P+ + L+ W+E L +R+++ W+G + L L
Sbjct: 419 RDELDSMVINNIRKKDHEPIRAVCYSLINWLEVNSEHLMERDYESSCKIWSGSEMLSNLH 478
Query: 374 EANISRQCFPILLECATKAIKEATDTES--------ELPHLSGMSVITLEGLFSSLTYFF 425
+ I+ FPIL +++ S E+P +S + + L+GLF L Y F
Sbjct: 479 KMGITTATFPILQGHLFAILQKEEKVSSIHGKEEAVEIPIISASTRVMLKGLFMVLDYLF 538
Query: 426 SRNGSHVSDYQLALQKYI------------------KRDSKNPGGNWTHTLSLWCLNPAV 467
+N DY++A+Q+ K + P L+ WCLNPAV
Sbjct: 539 RQNSRFADDYKVAIQQTYSWINQPDSSDKNVFFVLPKNKKRLPQKTAVRVLNFWCLNPAV 598
Query: 468 VFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDN 527
F D+ +I+LTSGTLSPM SFSSELGV F LEA HVI+ + QV I +GP
Sbjct: 599 AFSDINGKVWNIVLTSGTLSPMKSFSSELGVTFTIQLEANHVIN-NSQVWVGTIGSGPQG 657
Query: 528 YPLNASYKTADGYKLMEKL 546
L A+++ + + +++
Sbjct: 658 RNLCATFQHTETFAFQDEV 676
Score = 76.3 bits (186), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 46/64 (71%), Gaps = 5/64 (7%)
Query: 18 YHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLA 77
Y +GG++++FPY+ Y SQL M ++ L+ Q H LLESPTG+GKSL+LLCS LA
Sbjct: 8 YTIGGVKIDFPYKAYPSQLAMMNSIVRGLNSKQ-----HCLLESPTGSGKSLALLCSALA 62
Query: 78 WQQN 81
WQQ+
Sbjct: 63 WQQS 66
>gi|398019061|ref|XP_003862695.1| helicase, putative [Leishmania donovani]
gi|322500925|emb|CBZ36002.1| helicase, putative [Leishmania donovani]
Length = 953
Score = 265 bits (676), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 229/799 (28%), Positives = 352/799 (44%), Gaps = 167/799 (20%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
V GI V FP++PY +Q+ FM V+ L + LLESPTGTGK+L LLCSTL W
Sbjct: 7 VSGITVSFPFEPYPAQVEFMRSVVKCLQHG-----FNGLLESPTGTGKTLCLLCSTLGW- 60
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVK 139
+Q A + H+ S Q + N+K
Sbjct: 61 --LAATSQGAVLRHT----------------------------SDQDQKGRGKYNHK--- 87
Query: 140 KKMTPTIFYASRTHSQISQVISEYKKTAYR--VPMAVLASRKHYCTNKYVRDKENIDEE- 196
+ Y SRTH+Q++QV+ E K+T+Y MAVL SR+H C NK V + +
Sbjct: 88 ------VVYCSRTHAQLTQVVRELKRTSYAQCFTMAVLGSREHMCLNKEVTRLPSSQAQH 141
Query: 197 --CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARS 254
C L +RN C F+ + SL C VHD+EDL+ G C Y+ R
Sbjct: 142 AMCSALRSERN--CRFFRGLLSAAAGASLLSPEC-AVHDMEDLMREGSRSGFCPYFHERD 198
Query: 255 MADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAG----------- 303
A DA +V PY+Y+++P + + ++ ILI+DEAHN+ + +G
Sbjct: 199 AAKDADVVLMPYNYVLDPSLHKQLPFELADCILIVDEAHNLPSVLSSSGCQTLSPLDVTT 258
Query: 304 -----------------SVDIDEDVLLKLQMELEQVCSVNPMIYQPLIEMTQDLVGWIER 346
++DEDV + + EL + + L+ + V
Sbjct: 259 AIHDCSRAIAMHRLTTKGAELDEDVAAEDEQELASL--------KILLSRLEMCVYAEPM 310
Query: 347 RKATLAKREFQHFFSC---WTGDKALRELQEANISRQCFPILLECATKAIKEATD----- 398
+AT A Q C G L++A I+R+ F + T A A
Sbjct: 311 TEATAAPTPTQ----CDVVRDGSYMFVFLEKAFITREVFGAQSDGVTSASGLAGTMGKCV 366
Query: 399 ---TESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWT 455
+SE P S V LT F+ + +H+ + LQ+++
Sbjct: 367 TLLADSERPATSMARVQEF------LTRVFAFDMAHLDSTRFVLQQHLV------AAKAA 414
Query: 456 HTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQ 515
TL W L+ + + V S++LTSGTLSP++ F++ELG++F L+ HVI D Q
Sbjct: 415 RTLGFWELDNTRLMRQVVLPLHSVLLTSGTLSPLDQFAAELGMEFQVRLKGNHVIQPD-Q 473
Query: 516 VLTSVISTGPDNYPLNA--SYKTADGYK--LMEKLCNRWRETG--------QWSRLNAKK 563
VL V+ GP LN S++++ Y+ L L N R T ++ +N+
Sbjct: 474 VLGGVLCRGPSGEKLNGGFSFRSSVDYRVGLGMSLANIARNTPGGTLVFFPSYASMNSVV 533
Query: 564 PLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTI-----ESQEN 618
L+ G + + K + +S+ ++ V+ +NDL TI + +
Sbjct: 534 ELWQAGSGRAGDT-----KTVWGMLSE------LKPIFVEPSNSNDLPTIVQSFQKEVDT 582
Query: 619 ANKKGASFLAVCRGKI---------------VVGIPFPNINDIQVSLKKKYNDTYRSSK- 662
+ +GA LAVCRGKI V GIP+ N D+ V LK+ Y + +
Sbjct: 583 SPLRGAILLAVCRGKISEGIDFADNHGRCVLVAGIPYANHTDLFVRLKRDYITSVAPQRP 642
Query: 663 ----NLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRK 718
L +G++WY N+A RA+NQ +GR IRH+ DYG ++L DERF E +S+W+++
Sbjct: 643 LVHGKLFTGDDWYRNEAMRAVNQCVGRVIRHKDDYGVVLLADERF--EGLLGSVSEWVQR 700
Query: 719 SIKQYDSFDASLEGLKSFF 737
+ + F + + FF
Sbjct: 701 RTRVFSDFRGAYAAVAQFF 719
>gi|146093363|ref|XP_001466793.1| putative helicase [Leishmania infantum JPCM5]
gi|134071156|emb|CAM69841.1| putative helicase [Leishmania infantum JPCM5]
Length = 953
Score = 265 bits (676), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 229/799 (28%), Positives = 352/799 (44%), Gaps = 167/799 (20%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
V GI V FP++PY +Q+ FM V+ L + LLESPTGTGK+L LLCSTL W
Sbjct: 7 VSGITVSFPFEPYPAQVEFMRSVVKCLQHG-----FNGLLESPTGTGKTLCLLCSTLGW- 60
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVK 139
+Q A + H+ S Q + N+K
Sbjct: 61 --LAATSQGAVLRHT----------------------------SDQDQKGRGKYNHK--- 87
Query: 140 KKMTPTIFYASRTHSQISQVISEYKKTAYR--VPMAVLASRKHYCTNKYVRDKENIDEE- 196
+ Y SRTH+Q++QV+ E K+T+Y MAVL SR+H C NK V + +
Sbjct: 88 ------VVYCSRTHAQLTQVVRELKRTSYAQCFTMAVLGSREHMCLNKEVTRLPSSQAQH 141
Query: 197 --CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARS 254
C L +RN C F+ + SL C VHD+EDL+ G C Y+ R
Sbjct: 142 AMCSALRSERN--CRFFRGLLSAAAGASLLSPEC-AVHDMEDLMREGSRSGFCPYFHERD 198
Query: 255 MADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAG----------- 303
A DA +V PY+Y+++P + + ++ ILI+DEAHN+ + +G
Sbjct: 199 AAKDADVVLMPYNYVLDPSLHKQLPFELADCILIVDEAHNLPSVLSSSGCQTLSPLDVTT 258
Query: 304 -----------------SVDIDEDVLLKLQMELEQVCSVNPMIYQPLIEMTQDLVGWIER 346
++DEDV + + EL + + L+ + V
Sbjct: 259 AIHDCSRAIAMHRLTTKGAELDEDVAAEDEQELASL--------KILLSRLEMCVYAEPM 310
Query: 347 RKATLAKREFQHFFSC---WTGDKALRELQEANISRQCFPILLECATKAIKEATD----- 398
+AT A Q C G L++A I+R+ F + T A A
Sbjct: 311 TEATAAPTPTQ----CDVVRDGSYMFVFLEKAFITREVFGAQSDGVTSASGLAGTMGKCV 366
Query: 399 ---TESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWT 455
+SE P S V LT F+ + +H+ + LQ+++
Sbjct: 367 TLLADSERPATSMARVQEF------LTRVFAFDMAHLDSTRFVLQQHLV------AAKAA 414
Query: 456 HTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQ 515
TL W L+ + + V S++LTSGTLSP++ F++ELG++F L+ HVI D Q
Sbjct: 415 RTLGFWELDNTRLMRQVVLPLHSVLLTSGTLSPLDQFAAELGMEFQVRLKGNHVIQPD-Q 473
Query: 516 VLTSVISTGPDNYPLNA--SYKTADGYK--LMEKLCNRWRETG--------QWSRLNAKK 563
VL V+ GP LN S++++ Y+ L L N R T ++ +N+
Sbjct: 474 VLGGVLCRGPSGEKLNGGFSFRSSVDYRVGLGMSLANIARNTPGGTLVFFPSYASMNSVV 533
Query: 564 PLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTI-----ESQEN 618
L+ G + + K + +S+ ++ V+ +NDL TI + +
Sbjct: 534 ELWQAGSGRAGDT-----KTVWGMLSE------LKPIFVEPSNSNDLPTIVQSFQKEVDT 582
Query: 619 ANKKGASFLAVCRGKI---------------VVGIPFPNINDIQVSLKKKYNDTYRSSK- 662
+ +GA LAVCRGKI V GIP+ N D+ V LK+ Y + +
Sbjct: 583 SPLRGAILLAVCRGKISEGIDFADNHGRCVLVAGIPYANHTDLFVRLKRDYITSVAPQRP 642
Query: 663 ----NLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRK 718
L +G++WY N+A RA+NQ +GR IRH+ DYG ++L DERF E +S+W+++
Sbjct: 643 LVHGKLFTGDDWYRNEAMRAVNQCVGRVIRHKDDYGVVLLADERF--EGLLGSVSEWVQR 700
Query: 719 SIKQYDSFDASLEGLKSFF 737
+ + F + + FF
Sbjct: 701 RTRVFSDFRGAYAAVAQFF 719
>gi|270006398|gb|EFA02846.1| regulator of telomere elongation helicase 1 [Tribolium castaneum]
Length = 1338
Score = 262 bits (669), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 192/679 (28%), Positives = 315/679 (46%), Gaps = 129/679 (18%)
Query: 144 PTIFYASRTHSQISQVISEYKKTAY-RVPMAVLASRKHYCTNKYVRDKENIDEECKLLLG 202
P I YASRTH+Q+SQ + E K+TAY + VL SR C + V ++N + L
Sbjct: 671 PRIIYASRTHTQLSQAMQEMKRTAYNHLKACVLGSRDQMCIDPEVIQEKNASFKVNLCRA 730
Query: 203 D-RNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQL 261
+ C ++ + + P + + DIED+V +G+ C Y+ AR + + + +
Sbjct: 731 KVKRKQCKYYQRIERASHVPPVSD---LNIIDIEDVVKLGRECDFCPYHMARELKNRSDV 787
Query: 262 VFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQ 321
VF PY+Y+++P M+V+I G I+I DEAHNIE I D+ SV I + +E
Sbjct: 788 VFMPYNYLLDPRTSKNMDVEIFGNIIIFDEAHNIEKICEDSVSVQIKSS---DVDSAVED 844
Query: 322 VCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTG-DKALRELQEANISRQ 380
V SVN ++ + G+++ + Q F T ++ L +++ +++
Sbjct: 845 VESVNEVLTK----------GFVDVENVAFTSEDLQTFSQMLTKFNRELNGIKQFKLTQA 894
Query: 381 CFPILLECATKAIKEATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQ---- 436
+ + K+A E +S + V L+ F S T + R+G + +
Sbjct: 895 GSVFDGDYIFEMFKKAEIFEENSSGISDLIVGVLD--FMSTTSYIQRSGFGLQIFNNLLF 952
Query: 437 LALQK-----------------------YIKRD--SKN-PGGNWTHTLSLWCLNPAVVFK 470
+A K Y++R S+N N L+ WC +P
Sbjct: 953 IAFYKQGPEFRQKIKECFKVQVEDERPEYVRRTRYSQNMDKKNTCRVLNFWCFSPGFAMN 1012
Query: 471 DVAELSLS-IILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYP 529
+ + ++ +ILTSGTL+P+ SEL ++ G +E PH++ D QV ++S GPD P
Sbjct: 1013 MLMDRNIHCVILTSGTLAPLKPLISELELEIGVRIENPHIVKGD-QVCVKILSKGPDMEP 1071
Query: 530 LNASYK---------------------TADG-------YKLMEKLCNRWRETGQWSRLNA 561
LN++++ DG Y +M+K W+ G W +N
Sbjct: 1072 LNSNFENRSNPKYLQSLGLVISNLIRVIPDGVLIFFPSYVIMQKTIEHWQNDGTWDSINR 1131
Query: 562 KKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANK 621
KP+++EPK + +F + YY I ++ +
Sbjct: 1132 TKPIYIEPK--DKIEFATAMSEYYAKI----------------------------QDPSY 1161
Query: 622 KGASFLAVCRGKI---------------VVGIPFPNINDIQVSLKKKYNDTYRSSKN--L 664
GA F+ VCRGK+ + G+P+P + D ++ LKK+Y D +R SKN
Sbjct: 1162 SGAIFMGVCRGKVSEGLDFADINGRAVFITGLPYPPLKDPKIILKKQYLD-FRYSKNKEY 1220
Query: 665 LSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYD 724
L G++WY +A RA+NQAIGR IRH+ DYGAIILLD RF R + ++S WLR+ I
Sbjct: 1221 LKGDDWYSLEATRAINQAIGRVIRHKSDYGAIILLDSRFTNPRIKNNLSLWLRQHITDMK 1280
Query: 725 SFDASLEGLKSFFRDVKGW 743
+F + ++ FF++ + +
Sbjct: 1281 NFGEIIRNVRVFFQNAQKF 1299
Score = 183 bits (465), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 146/528 (27%), Positives = 229/528 (43%), Gaps = 107/528 (20%)
Query: 286 ILILDEAHNIEDIARDAGSVDI---------DEDVLLKLQMELEQVCSVN----PMIYQP 332
+L DE HNIE I D+ S+ I DE + + E + N P + P
Sbjct: 1 MLYFDEGHNIEKICEDSASIQIKSADIALCIDEVTGVMRALSDETILDFNDKEVPKDFTP 60
Query: 333 -----LIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRELQEANISRQCFPILLE 387
L E+ + ++ + E +F G +A I+ + +L
Sbjct: 61 DELCILKEIFLNFEKVLDEIEVKAGAPEGTYF----EGSYIFEMFNKAGINDGNYNSVLS 116
Query: 388 CATKAIK-EATDTESELPHLS-GMSVIT--LEGLFSSLTYFFSRNGSHVSDYQLALQKYI 443
K I+ A+ E G+ + + L FSS++ F +A+++
Sbjct: 117 VMDKIIQFLASGNEGPFARKGVGLQLFSDLLTIAFSSVSPQFKEKIKRCYKVHIAVEEGK 176
Query: 444 KRD-----SKNPGGNWTHTLSLWCLNPAVVFKDVAELSLS-IILTSGTLSPMNSFSSELG 497
K+ SK + LS WC +P + + + +ILTSGTL+P+ SEL
Sbjct: 177 KKAADDWLSKATLKTRSRVLSYWCFSPGFGMNMLLDQGVHCVILTSGTLAPLKPLISELE 236
Query: 498 VQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTAD------------------- 538
+ G +E PH++ D QV +++ GPD PLN +Y+ D
Sbjct: 237 LNVGVRIENPHIVKGD-QVCVKILTKGPDGEPLNCNYQNRDNPNYLMSLGQVVLNLIRII 295
Query: 539 ---------GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSIS 589
Y +M+K W+E+G W +N K +FVEPK + F + YY+ +
Sbjct: 296 PHGVLIFFPSYPIMQKCQQYWQESGIWDGINKIKAIFVEPK--DKNSFTFAMSEYYSKV- 352
Query: 590 QGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKI--------------- 634
++ N KGA F+ VCRGK+
Sbjct: 353 ---------------------------KDPNYKGAIFMGVCRGKVSEGLDFADSNGRAVF 385
Query: 635 VVGIPFPNINDIQVSLKKKYNDTYRS-SKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDY 693
++G+P+P + D ++ LKK+Y D + K L G++WY +A RA+NQAIGR IRH+ DY
Sbjct: 386 IIGLPYPPLKDPKIILKKRYLDVCNAKDKEYLKGDDWYSLEATRAINQAIGRVIRHKNDY 445
Query: 694 GAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFRDVK 741
GAIILLD RF R + ++S WL+K IK +F A L+ FF++ +
Sbjct: 446 GAIILLDSRFTNPRIQGNLSLWLKKHIKIMQNFGALTRDLRLFFQNAQ 493
>gi|443682315|gb|ELT86966.1| hypothetical protein CAPTEDRAFT_219962 [Capitella teleta]
Length = 1021
Score = 261 bits (667), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 186/634 (29%), Positives = 275/634 (43%), Gaps = 149/634 (23%)
Query: 140 KKMTPTIFYASRTHSQISQVISEYKKTAYR-VPMAVLASRKHYCTNKYVRDKENIDEECK 198
KK P I++ +RTH QI Q+ E KT Y+ M++L+SR+H C + + ++ECK
Sbjct: 72 KKKVPKIWFGTRTHKQIGQIARELGKTDYKHTRMSILSSREHTCIHPQISSSSYKNDECK 131
Query: 199 LLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADD 258
L GC + V + S+ G + +E+ V
Sbjct: 132 AL--REGPGCRFHEQVKRAVSQKSIASQGLQQAWQLEEFVT------------------- 170
Query: 259 AQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQME 318
FC +R M++ +KG I+ILDE HNIED R+A S + E L + +
Sbjct: 171 ----FC---------LRNKMDISLKGEIVILDEGHNIEDACREAASYTVQEKQLTEGVQD 217
Query: 319 LEQVCS--VNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRELQEAN 376
L+ + P + ++++ Q V I + + L + W G + + +++
Sbjct: 218 LQHLIEEKFKPGEHGVMMKLLQGFVDLIGKNQDALEDGDQS---KVWGGMEMIAQIESVG 274
Query: 377 ISRQCFPILLECATKAIKEATD----TESELPHLSGMSVITLEGLFSSLTYFFSRNGSHV 432
I + C + +E +D E + ++ LEGL + + + N H
Sbjct: 275 IGAHNVELYQRCLNEITEEESDPKKREEQKFLKAKSQTLNALEGLLMVIKFALADNHKHA 334
Query: 433 SDYQ------------------LALQK---YIKRDSKNPGGNWTHT-------------L 458
DY+ LA+ K YI R + +P W L
Sbjct: 335 DDYRCCVSVMTAFNTHQIMPSRLAITKTTMYI-RQATSPRNGWLSRRKGNRMQQETVCFL 393
Query: 459 SLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLT 518
+ WCLNPAV F + + S+ILTSGTLSPM SF SELG F LEA HVI QV
Sbjct: 394 NFWCLNPAVAFGSMGLDARSVILTSGTLSPMTSFQSELGASFPIQLEANHVISPS-QVWV 452
Query: 519 SVISTGPDNYPLNASYKTA---------------------DG-------YKLMEKLCNRW 550
IS GP L SY+ + DG YK ++KL +RW
Sbjct: 453 GTISHGPKGGSLLGSYQNSETLRYQDEIGELILHVCQIVPDGVLCFLPSYKSLQKLADRW 512
Query: 551 RETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDL 610
+ TG W++ K +F E + +E+F+ ++K++Y++I
Sbjct: 513 KNTGLWAQFMNHKQVFSESRASDKENFDEIMKNFYDAIHD-------------------- 552
Query: 611 NTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKKYN 655
E+ G F AVCRGK I +GIPFPN D QV LK+KYN
Sbjct: 553 ------EDQEVNGGLFFAVCRGKVSEGMDFSDRNARAVIAIGIPFPNYKDAQVELKQKYN 606
Query: 656 DTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRH 689
+ + + LLSG +WY QA+RALNQA+GRCIRH
Sbjct: 607 NMFGQKRGLLSGRDWYEIQAYRALNQALGRCIRH 640
>gi|167526369|ref|XP_001747518.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773964|gb|EDQ87598.1| predicted protein [Monosiga brevicollis MX1]
Length = 1029
Score = 259 bits (662), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 198/665 (29%), Positives = 299/665 (44%), Gaps = 113/665 (16%)
Query: 151 RTHSQISQVISEYKKTAYRVPMAVLASRKHYCTN---KYVRDKENIDEECKLLLGDRNLG 207
R +SQ + E K T YR AVL SR C + K + CK+ + +
Sbjct: 48 RAELLLSQTVKELKNTDYRARSAVLGSRDQLCVHPEVKTISSNAAKTRVCKIRVNAHD-- 105
Query: 208 CPQFKNVHKV-RGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPY 266
C ++NV V R + H D+EDLV +G+ C Y+ +RSM A ++ PY
Sbjct: 106 CSFYQNVDPVFRDVDADLATNPHPALDLEDLVQLGERRHACPYFLSRSMQSGADVILLPY 165
Query: 267 SYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQVCSV- 325
+Y+I+ R + +D+ GA++I DEAHNIE +A S D+ L E++Q+ V
Sbjct: 166 NYLIDKQTRASQGIDLNGAVVIFDEAHNIESSCEEAASFDLTSADLAGFLTEIDQLLRVA 225
Query: 326 ---NPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRELQEANISRQCF 382
P + + + + + V +E A L + E ++ GD + EA IS
Sbjct: 226 DADRPELSEDRLLLLKKAVLDLE---AALDRIELKNGGFKAKGDYMYQFFAEAGISSTTH 282
Query: 383 ----PILLECATKAIKEATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLA 438
+L +C +++ + +LS + L+ FS R Y +
Sbjct: 283 HDLSELLEQCVMTLLQQQANATGRC-YLSKFQDV-LKVAFSDAAKTDPRVLEKF--YYVH 338
Query: 439 LQKYIKRDSKNPGGNWTH-----------TLSLWCLNPAVVFKDV-AELSLSIILTSGTL 486
+++ R S+ +W++ TLSLWC +PA K + AE ++ILTSGTL
Sbjct: 339 VEEKANRSSQKKTSDWSNSMQKLDKRTVRTLSLWCFSPAFAMKSLMAEGIKTLILTSGTL 398
Query: 487 SPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTAD-------- 538
+P+NSF +EL F LE PH+I QV V+ GP N L ++Y+ +
Sbjct: 399 APLNSFKAELMTDFPVMLENPHII-TGKQVWAGVLPVGPSNARLISNYENRNLPAYKNEL 457
Query: 539 --------------------GYKLMEKLCNRWRE---TGQ--WSRLNAKKPLFVEPKGGS 573
Y +M W++ TG W RL+ K + VEP+
Sbjct: 458 GNSLVNFSRIVPAGLLVFFPSYGVMASCVEAWQQPSSTGACIWDRLSQYKTVIVEPR--E 515
Query: 574 QEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGK 633
+ +F + +Y+ I ++ GA FLAVCRGK
Sbjct: 516 KHEFVAAMHAFYDKI----------------------------QDPALSGAIFLAVCRGK 547
Query: 634 ---------------IVVGIPFPNINDIQVSLKKKY-NDTYRSSKNLLSGNEWYCNQAFR 677
I+ G+P+P + + +V LK++Y +D R LSG +WY QA R
Sbjct: 548 VSEGLDFANSNGRAVIITGLPYPAVKEPRVVLKRQYMDDACRRRATTLSGQDWYQMQATR 607
Query: 678 ALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFF 737
A+NQAIGR IRHR DYGAIIL D RF +ER RA + KWL+K ++ + F + L FF
Sbjct: 608 AVNQAIGRVIRHRQDYGAIILADSRFADERQRACLPKWLQKHVEVFTKFGEAQRSLTLFF 667
Query: 738 RDVKG 742
R K
Sbjct: 668 RRAKA 672
>gi|148232300|ref|NP_001083272.1| BRCA1 interacting protein C-terminal helicase 1 [Xenopus laevis]
gi|37747678|gb|AAH60014.1| MGC68622 protein [Xenopus laevis]
Length = 713
Score = 258 bits (659), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 156/445 (35%), Positives = 244/445 (54%), Gaps = 40/445 (8%)
Query: 136 KNVKKKMTPTIFYASRTHSQISQVISEYKKTAYR-VPMAVLASRKHYCTNKYVRDKENID 194
+N +K P IF+ +RTH QI+Q+ E ++TAY V M +L+SR+H C + + N
Sbjct: 243 ENGEKPKVPKIFFGTRTHKQIAQITRELRRTAYSSVRMTILSSREHTCVHPDIHSNRN-- 300
Query: 195 EECKLLLGDRN-LGCPQFKNVHKVRGHPSLQ-KGGCHEVHDIEDLVNVGQVVRGCSYYAA 252
E CK LL ++ C + VHK+ LQ + G + DIE+LV +G+ +R C+Y+AA
Sbjct: 301 ERCKELLEAKDGHSCRFYHGVHKMNEQSLLQYRHGIDKAWDIEELVGLGKRLRACAYFAA 360
Query: 253 RSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVL 312
R + A +VFCPY+Y+++ IR +ME+ ++ ++ILDEAHNIED AR++ S ++ L
Sbjct: 361 RELMQGADIVFCPYNYLLDSQIRESMEICLENQVVILDEAHNIEDCARESASFSCSDEQL 420
Query: 313 LKLQMELEQVCSVNPMI----YQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKA 368
+ + E++ + VN I ++PL + L WI + L +RE++ W G +
Sbjct: 421 MYARDEIDSM--VNHGIRVSDHEPLRAVCYSLTNWIRQCSDQLVEREYEASCKVWNGKEI 478
Query: 369 LRELQEANISRQCFPILLECATKAIKEATDTES---------ELPHLSGMSVITLEGLFS 419
L + I+ FP LL+ A+ E + + ++P LS S + L+GLF
Sbjct: 479 LSIFHDMGITNATFP-LLKVNLAAVVEKEEKITMFHGQENVIKIPTLSPQSQMVLKGLFL 537
Query: 420 SLTYFFSRNGSHVSDYQLALQK---YIKR-DSKNPGGNW--------------THTLSLW 461
L Y F +N DY++ALQ+ + R D + G + +TL+ W
Sbjct: 538 VLDYLFRQNNRFAEDYRVALQQSYTWTNRPDIPDENGFFARPRSRRSIRQKIMVYTLNFW 597
Query: 462 CLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVI 521
CLNPAV F D++ + +I+LTSGTLSPM SFSSELGV+F LEA HVI QV +
Sbjct: 598 CLNPAVAFSDLSSNARTIVLTSGTLSPMGSFSSELGVKFSIQLEANHVIHKS-QVWVGTV 656
Query: 522 STGPDNYPLNASYKTADGYKLMEKL 546
GP L A+++ + + +++
Sbjct: 657 GAGPKGRKLCATFQHTETFDFQDEI 681
Score = 70.9 bits (172), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 46/67 (68%), Gaps = 5/67 (7%)
Query: 15 LNAYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCS 74
L+ Y +GG+++ FP + Y SQL M ++ L+ Q H LLESPTG+GKSL+LLCS
Sbjct: 5 LSEYTIGGVKILFPCRAYPSQLAMMNSIMRGLNCKQ-----HCLLESPTGSGKSLALLCS 59
Query: 75 TLAWQQN 81
LAWQQ+
Sbjct: 60 ALAWQQS 66
>gi|340379357|ref|XP_003388193.1| PREDICTED: hypothetical protein LOC100635447 [Amphimedon
queenslandica]
Length = 1055
Score = 258 bits (659), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 151/399 (37%), Positives = 213/399 (53%), Gaps = 72/399 (18%)
Query: 393 IKEATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGG 452
+K D P L V ++ LF + Y F ++ ++AL+K + + G
Sbjct: 3 LKSKEDKRPPPPKLPVGIVHIIDSLFIIMGYLFKQSK------KIALKKAMSIQPQKKLG 56
Query: 453 NW-----TH------TLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFG 501
W TH +L WCLNPAV F ++ +++ SIILTSGTLSPM+SFSSELGV F
Sbjct: 57 GWRGRSNTHEKVLLISLHFWCLNPAVAFSEL-QVAHSIILTSGTLSPMSSFSSELGVIFP 115
Query: 502 TCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTAD----------------------- 538
LEA HV+ Q S +S GP + PLNASY+ AD
Sbjct: 116 IQLEANHVV-AQSQTWVSTLSHGPSSQPLNASYQFADTFEFQDEIGNAILEVCKVVPFGV 174
Query: 539 -----GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSK 593
YKL+EKL +RW++TG W ++ KK + EP+ + DFEIV+ +Y + +
Sbjct: 175 LCFVSSYKLLEKLTSRWQDTGTWFQILKKKHIVCEPRAADKADFEIVMSQFYTRV----Q 230
Query: 594 CAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGI 638
AV R + D N + + + GA F AVCRGK I +GI
Sbjct: 231 TAVERAR-----SGEDTNVDDEDSESVQDGALFFAVCRGKVSEGLDFADNNARAVITIGI 285
Query: 639 PFPNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIIL 698
PFPN+ D QV LK++YN+++ + LLSG+EWY QA+RALNQA+GRCIRH+ D+GA+IL
Sbjct: 286 PFPNVKDEQVGLKREYNNSHSYHRGLLSGSEWYEIQAYRALNQALGRCIRHKKDWGALIL 345
Query: 699 LDERF-QEERNRAHISKWLRKSIKQYDSFDASLEGLKSF 736
+DERF + R +SKW+R+ + + F ++ L F
Sbjct: 346 IDERFSKSARYVKGLSKWVRQRVGHHSVFTDAMSSLNEF 384
>gi|328772350|gb|EGF82388.1| hypothetical protein BATDEDRAFT_22849 [Batrachochytrium
dendrobatidis JAM81]
Length = 996
Score = 254 bits (650), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 216/743 (29%), Positives = 341/743 (45%), Gaps = 131/743 (17%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ I V+FP+QPY Q M +I+ L +++ +AL+ESPTGTGK+L LLCSTLAW+
Sbjct: 21 INRIAVQFPFQPYPQQNALMTTIINALQKSE-----NALVESPTGTGKTLCLLCSTLAWR 75
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANG--GGFIPESQPSTIPPSTNGQTAQVAMNNKN 137
L + A S ++ DT V D L+ G + +P PP
Sbjct: 76 STYMLWRKEAMRSETERDT-LVLDQLSMQAFGSMHSDDRPIGKPPQ-------------- 120
Query: 138 VKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPM-AVLASRKHYCTNKYVRDKENIDEE 196
IF+ASRTHSQ+SQ ISE + TAYR + V+ SR C N V +N
Sbjct: 121 --------IFFASRTHSQLSQAISELRNTAYRNAVCTVVGSRDQMCINPAVAQVKNTLRA 172
Query: 197 --CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARS 254
CK ++ + C + H + DIEDLV G+ + C YY +++
Sbjct: 173 SLCKSMVQKQT--CSYHAESEGLHNH----AAATALIMDIEDLVVFGRERKACPYYMSKA 226
Query: 255 MADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLK 314
+ A ++F PY+Y+++ R + ++ +I+I D E +LL
Sbjct: 227 IQPRADIIFLPYNYLVDRNSRNSQNFSLENSIIIFD------------------EALLLN 268
Query: 315 LQMELEQVCSVNPMIYQPLIE--MTQDLVGWIERRKATLAKREFQHFFSCWTGDKALREL 372
L++ ++++ S P + +E L G +E F+ D L L
Sbjct: 269 LKINIQKLLS-TPRVSSKELEGSYILKLFGPVELDGVV-------QNFNSKVVDTCLGIL 320
Query: 373 --QEANISRQCFPILLECATK---AIKEATDTESELPHLSGMSVITLEGLFSSLTYFFSR 427
+ + ++ P LL + A++ A + S L H M I S S+
Sbjct: 321 TYDQIFVKKRQHPSLLTFKSALRIAVQAANEDHSALSHY--MIYIQYTSTKSD-----SK 373
Query: 428 NGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSL-SIILTSGTL 486
+ +H Y K N LS WC N V +++ + + SI++ SGTL
Sbjct: 374 SATH---YGFIPDK----------NNQDILLSFWCFNSGVAMQELKRMKVRSIVVASGTL 420
Query: 487 SPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTADGYKLMEKL 546
SP++ FS E+G+ F LE HVID QV SV++ G N P++ +YK+ + ++
Sbjct: 421 SPLDGFSDEMGIPFPHRLENTHVIDQS-QVYISVVTKGSQNIPISTAYKSRETNNSTKEF 479
Query: 547 CNRWRETGQ------------WSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKC 594
N E + +S +N ++ +P +++ K + SIS+
Sbjct: 480 GNAIIEFAKIVPDGMLVFFTSYSIMNTCISVWKQPSN------DLISKSIWESISELK-- 531
Query: 595 AVVRKKRVKREGNNDLNTIESQENANK-KGASFLAVCRGKI---------------VVGI 638
+ + R ++E + + E + + K F A+CRG++ + GI
Sbjct: 532 YPIMESRNQQEFVLAMKSFEERIDQKKWPPPIFFAICRGRVSEGIDFSDRKGRAVVIYGI 591
Query: 639 PFPNINDIQVSLKKKYNDTYRS-SKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAII 697
P+P D V LK+KY D+ + S+ + G EWY QA R++NQAIGR IRH+ D+GAI+
Sbjct: 592 PYPTYKDPNVMLKQKYLDSAAAKSQGRIRGKEWYLQQACRSVNQAIGRVIRHKNDFGAIL 651
Query: 698 LLDERFQEERNRAHISKWLRKSI 720
L DERFQE + ++ WLR SI
Sbjct: 652 LCDERFQETKTIRNLPHWLRSSI 674
>gi|17506821|ref|NP_492769.1| Protein RTEL-1 [Caenorhabditis elegans]
gi|75018688|sp|Q93575.3|RTEL1_CAEEL RecName: Full=Regulator of telomere elongation helicase 1 homolog
gi|3876338|emb|CAB02102.1| Protein RTEL-1 [Caenorhabditis elegans]
Length = 994
Score = 253 bits (647), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 225/835 (26%), Positives = 351/835 (42%), Gaps = 203/835 (24%)
Query: 23 IQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNC 82
+ V+FP++PY Q +FM V+ LDR A LESPTGTGK+LSLLCSTLAW Q
Sbjct: 17 LSVKFPFEPYECQRIFMKNVVDVLDR-----KLDAALESPTGTGKTLSLLCSTLAWVQRQ 71
Query: 83 KLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKKM 142
K +KP A GG ++ +K
Sbjct: 72 K---------ETKPLDFATWQTSGAGGA---------------------EKTDEKLKSAY 101
Query: 143 TPTIFYASRTHSQISQVISEYKKTAYR-VPMAVLASRKHYCTNKYVRDKENIDEE---CK 198
PTIFYASRTHSQ+ QV+ E +T Y+ V +L SR+H+C N+ V+ + + + C+
Sbjct: 102 VPTIFYASRTHSQLEQVVHELNRTEYKWVKTTILGSREHFCINQKVKKIKESNRQAHVCR 161
Query: 199 LLLGDRNLGCP---QFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSM 255
L+ R C +F + L KG E DIED V +G C Y+ +R
Sbjct: 162 GLVSKR--ACHYYNKFDACTTDKMTEFLDKG---EAMDIEDFVKLGTQNSLCPYFMSRQR 216
Query: 256 ADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKL 315
++ A+L+ PY+YII+P +R ++D+K +I+I DEAHN+E I S ++ +
Sbjct: 217 SETAELILLPYNYIIDPKMRRRYKLDLKNSIVIFDEAHNLESICESNASAELTSTSIALC 276
Query: 316 QMELEQVC----------------------SVNPMIYQPLIE--MTQDLVGWIERRKATL 351
EL++V S + + LIE T+DL+ +E K
Sbjct: 277 IEELKKVLALLVDEEETARSEADAETGAFGSAKIDLTKKLIENLRTEDLMTVLE--KIFS 334
Query: 352 AKREFQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSV 411
+ E F G L+ + + ILLE KA +A E + L
Sbjct: 335 LEEEMDKLF----GSSQLKSVPPLSGKASDGEILLETLAKAGFDANSVERLVDVLRDAIS 390
Query: 412 ITL------------EGLFSSLTYFFSRNGSHVSDYQLAL-------------------- 439
L +G+ + S +H D A+
Sbjct: 391 YLLSKNEEVALTEKGDGMEKVADFLLSIYSTHAQDVAAAVGEETVKLVDRVDPKTVARNC 450
Query: 440 QKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGV 498
+ YI++D N T+ +C ++ + + + +++L SGTLSP+ +F+ +G+
Sbjct: 451 KLYIQKDKDNEK----LTIKYFCFQASISMRMLKMRGVRNVLLASGTLSPIQAFTYNMGL 506
Query: 499 QFGTCLEAPHVIDVDLQVLTSVISTGPDNYPL-------NASYKTA-------------- 537
FG LE H + + VLTS+++ G N Y T
Sbjct: 507 NFGAILENEHALK-QVPVLTSIVTRGKRGGLAGSFQNRKNLDYVTGVAEALLRVMEVIPQ 565
Query: 538 ------DGYKLMEKLCNRWRETGQ--------WSRLNAKKPLFVEPKGGSQEDFEIVLKH 583
Y M++L W+ T W ++ K + VEP+ ++E+ +
Sbjct: 566 GILIFFSSYSQMDELVATWKTTKWSSNSNESFWEKMEKTKRVVVEPR--AKEELAAIRLR 623
Query: 584 YYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNI 643
Y +S+ + GA+ LAVCRGK+ GI F +
Sbjct: 624 YTQGVSE------------------------------QHGAALLAVCRGKVSEGIDFCDA 653
Query: 644 ---------------NDIQVSLKKKYNDTYRSSKNL----LSGNEWYCNQAFRALNQAIG 684
+D +V LKK Y D K+ S +WY +AFRA+NQAIG
Sbjct: 654 ESRAVIIIGIPYPPIHDERVVLKKMYLDDLMGRKDTKSERQSSQDWYQMEAFRAVNQAIG 713
Query: 685 RCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFRD 739
R +RH+ D+G ++L+D R+ + KWLR +I + D+ +L+ + FF++
Sbjct: 714 RVLRHKDDFGTVVLMDTRYASAKPEM-FPKWLRNTISRSDTDGCALKTSR-FFKE 766
>gi|297597115|ref|NP_001043456.2| Os01g0592900 [Oryza sativa Japonica Group]
gi|53791584|dbj|BAD52706.1| DEAH helicase isoform 5-like [Oryza sativa Japonica Group]
gi|255673416|dbj|BAF05370.2| Os01g0592900 [Oryza sativa Japonica Group]
Length = 876
Score = 251 bits (642), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 200/651 (30%), Positives = 295/651 (45%), Gaps = 126/651 (19%)
Query: 172 MAVLASRKHYCTNKYV---RDKENIDEECKLLLGDRNLGCPQFKNVHK-VRGHPSLQKGG 227
MAVL SR+ C ++ V R ++ + C L R C +V + +R + L
Sbjct: 1 MAVLGSREQMCIHEEVSKLRGRQQ-NNACHYLCKKR--WCRHHNSVAEFMRNNSELGSEA 57
Query: 228 CHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAME-VDIKGAI 286
C DIEDLVN+G+ C YY +R ++ ++F PY+Y+I+P R ++ + A+
Sbjct: 58 C----DIEDLVNIGRTKGPCPYYISRELSKSVDILFAPYNYLIDPGNRRSLNGIPWDNAV 113
Query: 287 LILDEAHNIEDIARDAGSVDIDEDVL---LKLQMELEQVCSV------------NPMIYQ 331
LI DEAHN+E I DA S D+ + L + E Q+CS +P Y
Sbjct: 114 LIFDEAHNLESICADAASFDLLPNNLSSCIAEAQECIQLCSAKRTFENSADKQFDPENYA 173
Query: 332 PLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRELQEANISRQCFPILLEC--- 388
L + L I + + +E H G+ L E NI+ + L++
Sbjct: 174 ILKALLMALEKKIS--EVVIDSKELGH---TKPGNYIYEFLSELNITSETSKKLIDTIDG 228
Query: 389 ATKAIKEATDTESELPHLSGMSVITLEGLFSSLTYFFSRNG-SHVSDYQLALQKYIKR-- 445
A+ ++E E+ + +V LE + L F G SH Y+ + + +
Sbjct: 229 ASLLLEEGNSAETGPGMKAKATVCRLETIRDILDIIFRGGGQSHAKYYRFHVNECQQNSG 288
Query: 446 DSKNPGGNWTHTLSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCL 504
D+ G + TLS WC NP + ++ +L + SIILTSGTLSP++S + EL ++F L
Sbjct: 289 DALKVLGKVSRTLSWWCFNPGLAMEEFLKLGVRSIILTSGTLSPLDSLALELNLEFPVRL 348
Query: 505 EAPHVIDVDLQVLTSVISTGPDNYPLNASYKT---------------------ADG---- 539
E PHVI D Q+ V+ GP +PLN+SY+T DG
Sbjct: 349 ENPHVIASD-QIWVGVVPVGPSGHPLNSSYRTRETLKYKQELGITIVNFARIVPDGLLVF 407
Query: 540 ---YKLMEKLCNRWRETGQ---------WSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNS 587
Y +M+K N W++ W R+ K +EP+ S +F ++ Y
Sbjct: 408 FPSYSMMDKCINCWKDRNHENSSDEHTIWQRICKHKQPVIEPRQSS--NFPNAIEDYAAK 465
Query: 588 ISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGK-------------- 633
+ +++ GA F AVCRGK
Sbjct: 466 L----------------------------RDSSTTGAIFFAVCRGKVSEGLDFADRAGRA 497
Query: 634 -IVVGIPFPNINDIQVSLKKKYNDTYRSSKN----LLSGNEWYCNQAFRALNQAIGRCIR 688
IV G+PF D +V LK+ Y D S+ N L+G EWY QA RA+NQA+GR IR
Sbjct: 498 VIVTGMPFATPTDPKVRLKRDYLDKLGSASNKNSKALTGEEWYVQQAARAVNQAVGRVIR 557
Query: 689 HRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFRD 739
HR DYGAII DERF + ++ +S WLR IK Y + ++GL FFRD
Sbjct: 558 HRHDYGAIIYCDERFVWQNYQSQMSYWLRPYIKCYKKYGEVVQGLTRFFRD 608
>gi|256053044|ref|XP_002570021.1| brca1 interacting protein C-terminal helicase 1 brip1 [Schistosoma
mansoni]
Length = 725
Score = 248 bits (633), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 185/648 (28%), Positives = 291/648 (44%), Gaps = 147/648 (22%)
Query: 233 DIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEA 292
DIEDLV + C Y+ +RS+A A ++FCPY Y+++P+ R A +++ I+ILDEA
Sbjct: 59 DIEDLVQALIPIPSCPYFCSRSLARSADIIFCPYDYLLDPLNRSATSLEVTDHIIILDEA 118
Query: 293 HNIEDIARDAGSVDIDEDVLLKLQMELE--QVCSVNPMIYQPLIEMTQDLVGWIERRKAT 350
HNIED +R+A S I E L + +LE ++ P LI M ++ ++ +
Sbjct: 119 HNIEDASREAASFTITEQQLKSARDDLEGLRIVGFEPEACSTLIAMVDGILRVMQLTLSR 178
Query: 351 LAKR-EFQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESE------- 402
L + E WTG + + + + K D E+
Sbjct: 179 LVRAGETTQPTQVWTGREICGLMSTVGLGPEQMIEQSSAYQKLSASIMDNENYEDWYRNR 238
Query: 403 ----------LPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYI--------- 443
P + ++ LF+ L Y F N H+SDY++ L + +
Sbjct: 239 NRDNSSNNQFQPKPTHRTLHFFNALFTVLNYMFRDNMCHLSDYRVVLVETMGYEKQLTKE 298
Query: 444 -----KRDSKNPGGNWTH--------------TLSLWCLNPAVVFKDVAELSLSIILTSG 484
K+ +++ W +L+ WCLNP+VVF +A ++ +IL SG
Sbjct: 299 SITDHKKSTESKMDAWISKKHVKPLFVENKQLSLNFWCLNPSVVFSQLASMAHCVILMSG 358
Query: 485 TLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTAD------ 538
TLSP++S +EL VQF LEA HVI + ++L + +S GP+ L A+Y+ +
Sbjct: 359 TLSPLDSLEAELNVQFPLRLEANHVIS-NTRLLVTTLSHGPNGTRLCATYQHQNTYTFQD 417
Query: 539 ----------------------GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQED 576
Y L++KL RW TG + LN K + +EP+ S
Sbjct: 418 EIGAVVVNACRLVPGGVLCFLPSYSLLDKLIQRWELTGLLNHLNMIKHVMIEPR--SSVG 475
Query: 577 FEIVLKHYYNSISQGSKCAVVRKKRVK-REGNNDLNTIESQENA-----NKKGASFLAVC 630
+ L+ +Y S++Q A ++ +R + NN+ + + N N+ G+ AVC
Sbjct: 476 LDDWLEEFYTSVNQNVPNAKLKSRRKSIGQANNNESPSSTTLNGNSLVLNQTGSIIFAVC 535
Query: 631 RGK---------------IVVGIPFPNINDIQVSLKKKYNDT-YRSS------------- 661
RGK I +GIP+P + QV K+++ND Y+SS
Sbjct: 536 RGKVSEGLDFADSYARLVIAIGIPYPAFTNPQVQQKREFNDALYKSSSPKMACADKHIRS 595
Query: 662 -------------------------------KNLLSGNEWYCNQAFRALNQAIGRCIRHR 690
+ +LSG+EWY QA+RALNQA+GRCIRH
Sbjct: 596 PLQSLNSSMEKYSDTNDDITSSTSNVSSPRPRKVLSGSEWYDAQAYRALNQALGRCIRHA 655
Query: 691 FDYGAIILLDERFQEERNR--AHISKWLRKSIKQYDSFDASLEGLKSF 736
D+G+IIL D RF E+ +R IS+W+R + + S+D+ L+SF
Sbjct: 656 NDWGSIILADARFVEQSSRYMCGISRWIRSRVNHHCSWDSLECQLQSF 703
>gi|350646191|emb|CCD59102.1| brca1 interacting protein C-terminal helicase 1 brip1, putative
[Schistosoma mansoni]
Length = 725
Score = 248 bits (632), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 185/648 (28%), Positives = 291/648 (44%), Gaps = 147/648 (22%)
Query: 233 DIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEA 292
DIEDLV + C Y+ +RS+A A ++FCPY Y+++P+ R A +++ I+ILDEA
Sbjct: 59 DIEDLVQALIPIPSCPYFCSRSLARSADIIFCPYDYLLDPLNRSATSLEVTDHIIILDEA 118
Query: 293 HNIEDIARDAGSVDIDEDVLLKLQMELE--QVCSVNPMIYQPLIEMTQDLVGWIERRKAT 350
HNIED +R+A S I E L + +LE ++ P LI M ++ ++ +
Sbjct: 119 HNIEDASREAASFTITEQQLKSARDDLEGLRIVGFEPEACSTLIAMVDGILRVMQLTLSR 178
Query: 351 LAKR-EFQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESE------- 402
L + E WTG + + + + K D E+
Sbjct: 179 LVRAGETTQPTQVWTGREICGLMSTVGLGPEQMIEQSSAYQKLSASIMDNENYEDWYRNR 238
Query: 403 ----------LPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYI--------- 443
P + ++ LF+ L Y F N H+SDY++ L + +
Sbjct: 239 NRDNSSNNQFQPKPTHRTLHFFNALFTVLNYMFRDNMCHLSDYRVVLVETMGYEKQLTKE 298
Query: 444 -----KRDSKNPGGNWTH--------------TLSLWCLNPAVVFKDVAELSLSIILTSG 484
K+ +++ W +L+ WCLNP+VVF +A ++ +IL SG
Sbjct: 299 SITDHKKSTESKMDAWISKKHVKPHFVENKQLSLNFWCLNPSVVFSQLASMAHCVILMSG 358
Query: 485 TLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTAD------ 538
TLSP++S +EL VQF LEA HVI + ++L + +S GP+ L A+Y+ +
Sbjct: 359 TLSPLDSLEAELNVQFPLRLEANHVIS-NTRLLVTTLSHGPNGTRLCATYQHQNTYTFQD 417
Query: 539 ----------------------GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQED 576
Y L++KL RW TG + LN K + +EP+ S
Sbjct: 418 EIGAVVVNACRLVPGGVLCFLPSYSLLDKLIQRWELTGLLNHLNMIKHVMIEPR--SSVG 475
Query: 577 FEIVLKHYYNSISQGSKCAVVRKKRVK-REGNNDLNTIESQENA-----NKKGASFLAVC 630
+ L+ +Y S++Q A ++ +R + NN+ + + N N+ G+ AVC
Sbjct: 476 LDDWLEEFYTSVNQNVPNAKLKSRRKSIGQANNNESPSSTTLNGNSLVLNQTGSIIFAVC 535
Query: 631 RGK---------------IVVGIPFPNINDIQVSLKKKYNDT-YRSS------------- 661
RGK I +GIP+P + QV K+++ND Y+SS
Sbjct: 536 RGKVSEGLDFADSYARLVIAIGIPYPAFTNPQVQQKREFNDALYKSSSPKMACADKHIRS 595
Query: 662 -------------------------------KNLLSGNEWYCNQAFRALNQAIGRCIRHR 690
+ +LSG+EWY QA+RALNQA+GRCIRH
Sbjct: 596 PLQSLNSSMEKYSDTNDDITSSTSNVSSPRPRKVLSGSEWYDAQAYRALNQALGRCIRHA 655
Query: 691 FDYGAIILLDERFQEERNR--AHISKWLRKSIKQYDSFDASLEGLKSF 736
D+G+IIL D RF E+ +R IS+W+R + + S+D+ L+SF
Sbjct: 656 NDWGSIILADARFVEQSSRYMCGISRWIRSRVNHHCSWDSLECQLQSF 703
>gi|426347270|ref|XP_004041278.1| PREDICTED: Fanconi anemia group J protein-like [Gorilla gorilla
gorilla]
Length = 469
Score = 246 bits (629), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 143/386 (37%), Positives = 200/386 (51%), Gaps = 91/386 (23%)
Query: 414 LEGLFSSLTYFFSRNGSHVSDYQLALQKYI------------------KRDSKNPGGNWT 455
L+GLF L Y F +N DY++A+Q+ K ++
Sbjct: 2 LKGLFMVLDYLFRQNSRFADDYKIAIQQTYSWTNQIDISDKNGLLVLPKNKKRSRQKTAV 61
Query: 456 HTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQ 515
H L+ WCLNPAV F D+ +I+LTSGTLSPM SFSSELGV F LEA H+I + Q
Sbjct: 62 HVLNFWCLNPAVAFSDINGKVQTIVLTSGTLSPMKSFSSELGVTFTIQLEANHIIK-NSQ 120
Query: 516 VLTSVISTGPDNYPLNASYKTAD----------------------------GYKLMEKLC 547
V I +GP L A+++ + YKL+EKL
Sbjct: 121 VWVGTIGSGPKGRNLCATFQNTETFEFQDEVGALLLSVCQTVSQGILCFLPSYKLLEKLK 180
Query: 548 NRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGN 607
RW TG W L K + VEP+GG + +F+ +L+ YY++I K +G
Sbjct: 181 ERWLSTGLWHNLELVKTVIVEPQGGEKTNFDELLQVYYDAI--------------KYKGE 226
Query: 608 NDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKK 652
D GA +AVCRGK I +GIPFPN+ D+QV LK+
Sbjct: 227 KD-------------GALLVAVCRGKVSEGLDFSDDNARAVITIGIPFPNVKDLQVELKR 273
Query: 653 KYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNR--A 710
+YND + + LL G +WY QA+RALNQA+GRCIRHR D+GA+IL+D+RF+ +R +
Sbjct: 274 QYNDHHSKLRGLLPGRQWYEIQAYRALNQALGRCIRHRNDWGALILVDDRFRNNPSRYIS 333
Query: 711 HISKWLRKSIKQYDSFDASLEGLKSF 736
+SKW+R+ I+ + +F+++LE L F
Sbjct: 334 GLSKWVRQQIQHHSTFESALESLAEF 359
>gi|71660707|ref|XP_822069.1| helicase [Trypanosoma cruzi strain CL Brener]
gi|70887462|gb|EAO00218.1| helicase, putative [Trypanosoma cruzi]
Length = 951
Score = 246 bits (629), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 226/826 (27%), Positives = 338/826 (40%), Gaps = 216/826 (26%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+G + V FP+ PY +Q+ +M VI L G C+ALLESPTGTGK+L LLCS LAW
Sbjct: 6 IGDVGVSFPFNPYPAQVEYMRAVIDALK-----GRCNALLESPTGTGKTLCLLCSALAWL 60
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVK 139
+ NG T Q ++
Sbjct: 61 EK------------------------------------------RNGMTQQ----RYQIE 74
Query: 140 KKMTPTIFYASRTHSQISQVISEYKKTAYR--VPMAVLASRKHYCTNKYVRDKENIDEE- 196
+ Y SRTH+Q+SQVI E K+T Y M++L SR+H C N V +
Sbjct: 75 GAGRTRVIYCSRTHAQLSQVIRELKRTRYGDIFSMSLLGSREHMCVNSQVLRLPTAQAQQ 134
Query: 197 --CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARS 254
C L ++N C ++ H + K G VHD+EDLV+ G+ C YY+ R
Sbjct: 135 SMCNTLREEKN--CRFYRGFQARNDHNTAVKDG-KWVHDMEDLVSDGRKCGYCPYYSERE 191
Query: 255 MADDAQLVFCPYSYIIN------------------------PVIRGA------MEVDIKG 284
A +A +VF PY+Y+ + P + GA +++
Sbjct: 192 EAKEADIVFLPYNYVFDLSIRKQLPFNLKGSILIVDEAHNLPSVLGASSCMNLQPLELTN 251
Query: 285 AILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQVCSVNPMIYQPLIEMTQDLVGWI 344
AI A ++ I D + D + L + E + + + + E QD
Sbjct: 252 AIHDCSRAIEMKRILMDTAAADDNSQDGLMDEQEFASLKIILCRLESCIAEENQD----- 306
Query: 345 ERRKATLAKREFQHFFSCWTGDKALRE-------LQEANISRQCF--------PILLECA 389
+ K ++ E G + +RE L +A I+R F + +
Sbjct: 307 DEEKKKISSNEVN---GSLPGVEIVREGSYMIPFLSKALITRDLFFGGNNQNGGGINDVI 363
Query: 390 TKAIKEATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSK- 448
TKAI + +ES + + L + L + + R S + ++I R +K
Sbjct: 364 TKAIAVLSQSES--------AALGLSKVQQFLNFVYERCESDDDE----AYRFILRGAKG 411
Query: 449 -NPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAP 507
N G N +L WCL+ + K + S++LTSGTLSP+ F++ELG++FG L+
Sbjct: 412 ANRGSN-QRSLGYWCLDTSCAVKTLVAGLNSLLLTSGTLSPLEHFAAELGIEFGVSLKGA 470
Query: 508 HVIDVDLQVLTSVISTGPDNYPLNASYK---------------------TADG------- 539
HVI + QVL V+ GP LN +Y T G
Sbjct: 471 HVIQQN-QVLGCVLCKGPSGEKLNGAYAYRNSVDYRVGLGMSLVNISRNTPGGVLVFFPS 529
Query: 540 YKLMEKLCNRWRE-TGQ-------WSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQG 591
Y + + WR +G+ W L KP+FVEP S D ++ + +
Sbjct: 530 YVALNAAIDLWRAGSGRPGESLTVWGMLEDLKPVFVEPVEAS--DLRTIVSRFQREV--- 584
Query: 592 SKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKI---------------VV 636
++A +GA LAVCRGKI V
Sbjct: 585 -------------------------DSAPSRGAILLAVCRGKISEGIDFADNHGRCVVVA 619
Query: 637 GIPFPNINDIQVSLKKKYNDTYRSSK-----NLLSGNEWYCNQAFRALNQAIGRCIRHRF 691
GIPF N D+ V LK++Y S + L +G++WY N+A RA+NQ +GR IRH+
Sbjct: 620 GIPFANHTDLFVRLKREYLTRVASHRPKVRGKLFTGDDWYMNEAMRAVNQCVGRVIRHKD 679
Query: 692 DYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFF 737
DYG ++L DERF E + +S+W+ Y F + + FF
Sbjct: 680 DYGVVLLADERFAERLD--GLSEWVANRCSIYREFREAYASVAQFF 723
>gi|156089201|ref|XP_001612007.1| DNA repair helicase (rad3) family protein [Babesia bovis]
gi|154799261|gb|EDO08439.1| DNA repair helicase (rad3) family protein [Babesia bovis]
Length = 948
Score = 246 bits (628), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 232/859 (27%), Positives = 369/859 (42%), Gaps = 185/859 (21%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ GI+V FPY PY +Q V+M VI +A R G +ALLESPTGTGK+LSL+CSTLA
Sbjct: 11 IDGIEVRFPYTPYENQTVYMETVI----KAVRHGK-NALLESPTGTGKTLSLICSTLACI 65
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVK 139
+ + K++ + + KP + L + +S Q + + K K
Sbjct: 66 WHTRFKDETS--FNLKPVQTTSEEGLMKTMQDLRDSI----------QQKKTIVKFKGSK 113
Query: 140 KKMTPTIFYASRTHSQISQVISEYKKTAYRVPMA-------VLASRKHYCTNKYVRDK-- 190
K I YASRTH+Q+ QVI E KKT+Y A +L SR C + ++
Sbjct: 114 KLR---ILYASRTHNQLKQVIREAKKTSYAKEFASKGLTTVLLGSRDQLCIHPGKKNATG 170
Query: 191 ENIDEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYY 250
E ++ C+ ++ ++ GC ++ + K +Q +E DIEDL+++G+ R C +Y
Sbjct: 171 EALNAFCRKMV--KHQGCMYYRGLKKKEISRKIQ---FYEFVDIEDLISLGKSTRCCPFY 225
Query: 251 AARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDED 310
A R + A + PY+Y+++P+ R AM++ + A+LI+DEAHNIE +A + I +
Sbjct: 226 ACRDAHESADVTMLPYNYLLSPISRDAMDIVLDNAVLIIDEAHNIESVAESSAGFTIRQV 285
Query: 311 VLLKLQMELEQVC----------------SVNPMIYQPLIEMTQDL-------------- 340
+ + M L + C V P+ L ++ L
Sbjct: 286 DIARFLMVLRRFCEYHIKAIEYQASNNTQEVAPIDLSALARLSVSLKGVDRFLTNVQFEN 345
Query: 341 -----------------VGWIERRKATLAKREFQHFFSCWTGDKALRELQEANISRQCFP 383
VG I R A + +F G LR + R C
Sbjct: 346 HGKDGEQGNNNVAYSWRVGDINRAHAVFRGVDILQYFLLTLGFNELRACNIEDTIRSCIS 405
Query: 384 IL------LECATKAIKEATDTESELPHLSGMSVITLEGLFSSL-----TYF--FSRNGS 430
+ A ++ E+T E + M + L+ +FS YF F +
Sbjct: 406 AISVDIDDFSLAHQSSYESTKVIQEDAQIMNMLLEFLQHIFSKEFFACPEYFHVFVTHDR 465
Query: 431 HVSDYQLALQKYIKRDSKNP-GGNWTH-----------------------TLSLWCLNPA 466
+D + R + P GG W + ++ C+
Sbjct: 466 RFADIDNSNTGGADRAASQPSGGGWKNKAAFRQSSTSSNNSTETNAPFPKVMAFECMQST 525
Query: 467 VVFKDVAELSL-SIILTSGTLSPMNSFSSELG---VQFGTCLEAPHVIDVD---LQVLT- 518
F + + S+ILTSGTLSP+ ++ +G V+F L + H++ V +V+T
Sbjct: 526 PSFLGLQNAGVRSVILTSGTLSPLADLANSIGGDKVRFEYQLSSSHIVPVSNLCPRVITG 585
Query: 519 -----SVISTGPDNYPLNASYKTADG--------------------YKLMEKLCNRWRET 553
S++S+ +N SY A G Y ++E N W+
Sbjct: 586 GDVDGSILSSDYNNRS-TPSYIKALGESVLTFVRCVPAGVLVFFVSYPVLEDTVNAWKSA 644
Query: 554 GQWSRLNAKKPLFVEPKGGSQ-------------EDFEIVLKHYYNSISQGSKCAVVRKK 600
G ++ L +K +F+E KG ++ +D + LK Y+ +G C +
Sbjct: 645 GIFAALEKEKRVFIESKGSAKSFVGNYYNRNTNVDDTQSQLKEYFTLTDKGVGCLFLGVC 704
Query: 601 RVK-REGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKY-NDTY 658
R K EG I+ +++ CRG + G+P+PN + ++LK Y Y
Sbjct: 705 RGKLAEG------IDFSDDS----------CRGVFLCGVPYPNPYEETIALKMDYLRKLY 748
Query: 659 RSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRK 718
KN + W+ +QA RA+NQAIGR IRH DYGAI+L D RF E +S W+ +
Sbjct: 749 --GKNNENVTHWFTSQAIRAVNQAIGRVIRHINDYGAIVLADRRFSAEHILKSVSSWVTR 806
Query: 719 SIKQYDSFDASLEGLKSFF 737
+I D+ +AS + FF
Sbjct: 807 NIMISDNMNASKIDILDFF 825
>gi|290987559|ref|XP_002676490.1| predicted protein [Naegleria gruberi]
gi|284090092|gb|EFC43746.1| predicted protein [Naegleria gruberi]
Length = 640
Score = 243 bits (621), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 195/684 (28%), Positives = 310/684 (45%), Gaps = 126/684 (18%)
Query: 133 MNNKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKEN 192
MN ++V P I + SRTHSQ++ I E KK+AY + V+ SR+ C N V +
Sbjct: 1 MNGQHVGP--IPKIIFTSRTHSQLTHAIKELKKSAYTPEIVVMGSREQSCINPDVISLKG 58
Query: 193 IDEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHD--IEDLVNVGQVVRG---- 246
+ K R+ GC + N SL+K G H+ E + +G
Sbjct: 59 FQQISKCTSLVRSGGCKYYTNF------TSLKKSGELFTHEKEDEIEDIEDLLEKGLKRC 112
Query: 247 -CSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSV 305
C ++ +R A+++F PY+Y+I+P++R + VDI +I+I DEAHN++ + +A S
Sbjct: 113 FCPFFYSREKQKVAEIIFMPYNYLIDPLLRKKVNVDISNSIIIFDEAHNVQKLCAEASSF 172
Query: 306 DIDEDVLLKLQMELEQV------CSVNPMIYQPLIEMTQD---LVGWIERRKATLAKREF 356
D + K E+E+ +++P Q E+ D + + + + E
Sbjct: 173 DFSTINISKAIAEIEKCRAEMDKLTIDPSDIQKSTELRSDCFDVSSALLDLDIHIDEMEI 232
Query: 357 QHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEA-TDTESELPHLSGMSVI--T 413
S TGD A+I P E + I+ T +++ SG+ +
Sbjct: 233 PEEGSTSTGDSIYEVFSYASIH----PSTWETFNEKIRSIITFLQNKKQSCSGLERVKEA 288
Query: 414 LEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNW--THTLSLWCLNPAVVFKD 471
+E +F+ N V ++ + YI K PG ++ + TLS WC NP + ++
Sbjct: 289 VERVFNEA------NCEEV--FKNFYKVYIYYSKKQPGKDFRKSKTLSFWCFNPGLSMQN 340
Query: 472 VA-ELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPL 530
+A E LS ILTSGTLSPM SF+ ELG+ F LE PHV++ + Q+ GP L
Sbjct: 341 LAKEGPLSFILTSGTLSPMESFAYELGLSFPIRLENPHVVNRE-QICVMAAQCGPGGTKL 399
Query: 531 NASYK---------------------TADG-------YKLMEKLCNRWRET-----GQWS 557
N+S+ DG Y LM++ W+++ W
Sbjct: 400 NSSFTNRASEPYLREVGTTLLNLSKVVPDGLLVFFPSYTLMDQCIEIWKKSNGGAKSTWD 459
Query: 558 RLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQE 617
+ K + EPK S+ V++ Y +SI R+GN
Sbjct: 460 SVTQNKTIITEPKESSK--LNQVIREYEDSIKN-------------RKGNTT-------- 496
Query: 618 NANKKGASFLAVCRGKI---------------VVGIPFPNINDIQVSLKKKYND------ 656
GA F AVCRG++ +VG+PFP + D++V LK+ Y D
Sbjct: 497 -----GACFFAVCRGRVSEGLDFINRNGRCCMIVGLPFPPLFDLKVKLKRDYLDETAKRI 551
Query: 657 -TYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKW 715
T + ++G++WY ++ RA+NQAIGR IRHR+DYGA++L DER+ + R +S+W
Sbjct: 552 TTENPNAKPITGSQWYTQESSRAVNQAIGRIIRHRYDYGAVVLCDERYATQNQRQQLSRW 611
Query: 716 LRKSIKQYDSFDASLEGLKSFFRD 739
L+ +K F L F+++
Sbjct: 612 LQPHLKVAGQFSEVNNALSLFYKN 635
>gi|391337516|ref|XP_003743113.1| PREDICTED: Fanconi anemia group J protein-like [Metaseiulus
occidentalis]
Length = 567
Score = 241 bits (616), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 176/552 (31%), Positives = 283/552 (51%), Gaps = 60/552 (10%)
Query: 13 KPLNAYH-VGGIQVEFPYQ-PYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLS 70
KP H +GG++V FPY+ PY Q V M R+I+ L + + + LLESPTGTGKSLS
Sbjct: 8 KPEQYSHPLGGLKVLFPYENPYPQQKVMMSRLITALKQKK-----NCLLESPTGTGKSLS 62
Query: 71 LLCSTLAWQQNCKLKNQ--LANISHSKP-----DTEAVTDP-LANGGGFIPESQPSTIPP 122
LLC+ LA+ ++ K K++ L P + ++ +P L + + P
Sbjct: 63 LLCAALAFCEDEKRKHRKGLEKFPDGLPPKAEESSHSLLEPELPKTKSVMDMYDDECVKP 122
Query: 123 STNGQTAQVAMNNKN------VKKKMTPTIFYASRTHSQISQVISEYKKTAYR-VPMAVL 175
N ++ +N K+ V+ P IFY +RTH Q+SQV++E+++T Y + M +L
Sbjct: 123 H-NESASKSLLNEKSPHAPEGVRILKAPKIFYGTRTHRQVSQVVNEFRRTGYHNMKMTIL 181
Query: 176 ASRKHYC-TNKYVRDKENIDEECKLLLGD--RNLGCPQFKNVHKVR--GHPSLQKGGCHE 230
SR+ C + K + I EEC+ + + LGC + K+ +P+ +GG E
Sbjct: 182 GSRERMCVSRKAIESVHGISEECRNFRKESKKGLGCRFLHRLQKINRYSYPTSMEGGKTE 241
Query: 231 VHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILD 290
DIED+V VG+ C YY + +A+DA +VFCPY+YI++P IR A+++ ++ I+ILD
Sbjct: 242 PWDIEDIVTVGKRHTLCPYYWSIQLAEDADIVFCPYNYILDPRIRAAVDIQVENNIVILD 301
Query: 291 EAHNIEDIARDAGSVDIDEDVLLKLQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKAT 350
EAHNIEDI RDA ++I +L ++ +E ++ ++ ++ A
Sbjct: 302 EAHNIEDICRDAMGMEIKLSDILHIEDFIENS-----------VKNHKETAALMQMSPAI 350
Query: 351 LAKREFQHFFSCWTGDKALRE------------LQEANISRQCFP----ILLECATKAIK 394
A R H D L+E L+ A + +P IL + ++I+
Sbjct: 351 GALR---HLLLNEAADVPLQEPRKLSTAQLCQLLEAAGLGPTTWPRVSEILGQLLNESIE 407
Query: 395 EATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRD-SKNPGGN 453
E ++ L S I + L + + + NG + ++ A+ K I ++ K G+
Sbjct: 408 EGGGEVADERLLDTRSRIFFDALCGTGGHMYKMNGKFLDCFRGAVSKKIAKEFQKELKGS 467
Query: 454 WTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVD 513
TL ++CLNPAV D+ + S+++ SGTLSPM SF ELG+ F L HV+ +
Sbjct: 468 PEITLQIFCLNPAVALVDIRDKLHSLVVASGTLSPMKSFECELGIPFPFSLSLNHVVREE 527
Query: 514 LQVLTSVISTGP 525
Q+L V++ GP
Sbjct: 528 -QMLACVLAKGP 538
>gi|47204868|emb|CAF94395.1| unnamed protein product [Tetraodon nigroviridis]
Length = 529
Score = 240 bits (612), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 160/480 (33%), Positives = 241/480 (50%), Gaps = 77/480 (16%)
Query: 143 TPTIFYASRTHSQISQVISEYKKTAY-RVPMAVLASRKHYCTNKYVRDKENIDEECKLLL 201
P IF+ +RTH QI+QV E ++T Y RVPM +L+SR H C N V +E CK L
Sbjct: 26 VPKIFFGTRTHKQITQVAHELRRTVYSRVPMTILSSRDHTCVNPEVAPHSKRNELCKERL 85
Query: 202 GDRN-LGCPQFKNVHKVRGHPSLQK-GGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDA 259
++ C + V K+ LQ+ G E DIEDLV++G+ +R CSY+AAR + DA
Sbjct: 86 EAKDGRSCHYYHGVQKMGEQYQLQRVHGLCEAWDIEDLVSLGKRLRSCSYFAARELMMDA 145
Query: 260 QLVFCPYSYIINPVIRGA----------MEVDIKGAILILDEAHNIEDIARDAGSVDIDE 309
+V CPY+Y+++P+IR + M++++ G IL+LDEAHNIED AR++ S ++
Sbjct: 146 DIVLCPYNYLLDPLIRESVSLEEQLEEMMDINLSGQILVLDEAHNIEDCARESASFTLNY 205
Query: 310 DVLLKLQMELEQVC--SVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDK 367
D LL + ELE + ++ P ++PL L+ WI+ ++ L++R ++ W+G
Sbjct: 206 DSLLSSRDELESMIRNNIRPDKHEPLRAFCYSLINWIQESQSLLSERGYESASKVWSGRD 265
Query: 368 ALRELQEANISRQCFPILLECATKAIK---------------EATDTESELPHLSGMSVI 412
+ I+ F IL + ++ + + LP LS + +
Sbjct: 266 MVDIFHNLGITSATFNILKQKLMAVLEKEERIGVVNGREDLVQVPTQSAPLPPLSSKAFL 325
Query: 413 -------------TLEGLFSSLTYFFSR-----NGSHVS------DYQLALQK------Y 442
T + S L F R N S VS DY++ALQ+
Sbjct: 326 WSWITSSETAAGQTETDIASRLCRFCQRVTLANNASTVSVRRFAEDYRVALQRSFAWTNQ 385
Query: 443 IKRDSKNPGGNWTH----------------TLSLWCLNPAVVFKDVAELSLSIILTSGTL 486
+ D+ + G + T+S WCLNPAV F D+ + SI+LTSGTL
Sbjct: 386 VPPDAPDAQGFFGRPHQRQRRSIRVKSEVLTVSFWCLNPAVAFSDLGDAVRSIVLTSGTL 445
Query: 487 SPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTADGYKLMEKL 546
SPM SFSSELGV+F LEA HVI+ QV + GP L A+++ A+ Y +++
Sbjct: 446 SPMASFSSELGVKFSIQLEANHVINKS-QVWVGTVGAGPHGKKLCATFQQAETYTFQDEV 504
>gi|268569974|ref|XP_002640663.1| C. briggsae CBR-DOG-1 protein [Caenorhabditis briggsae]
Length = 869
Score = 240 bits (612), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 216/838 (25%), Positives = 357/838 (42%), Gaps = 198/838 (23%)
Query: 23 IQVEFP--YQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW-- 78
+ V FP Y +Q + + R+++ L +Q + L ESPTG+GK+++LL ST AW
Sbjct: 71 VPVRFPKGMSLYPTQKLMIVRILAALKSSQ-----NVLGESPTGSGKTMALLSSTCAWLN 125
Query: 79 ---------QQNCKLKNQLANI------------SHSKPDTEAVTDPLA----NGGGFIP 113
++ C + + + + S+ E + +A F
Sbjct: 126 QYIEEKKKSREKCPIHGSMGGVRKEEYGEEEAEENQSEVKVEVKQENIAVKTEKKDLFEE 185
Query: 114 ESQPSTIPPSTNGQTAQVAMNNKNVKKKMTPT-----------IFYASRTHSQISQVISE 162
+ + IP G + + M++ ++K+ I+Y +RTH QI+QV+ E
Sbjct: 186 QWRDDFIPHGGPGPSLKFEMDSVKKEEKVENAATDCTCMPRVRIYYGTRTHKQIAQVVKE 245
Query: 163 YKKTAYR--VPMAVLASRKHYCTNKYVRDKENIDEECKLLLGDRNLGC-------PQFKN 213
+ + Y + +LASR C N R + +I CK + +GC P+F+
Sbjct: 246 FSRLPYANIIKHTILASRDQSCINPTARKQPDISGYCKEINSAHGIGCQFKNAMRPRFEK 305
Query: 214 VHKVRGHPSLQKGGCHEVHDIEDLVNVGQVV--RGCSYYAA-RSMADDAQLVFCPYSYII 270
+R H L G V D+E++V + + C Y++ R + DA L+FCP+SY++
Sbjct: 306 ASMLRSH--LMDQGTM-VFDMEEIVETLALAYPQICPYFSTNRILTQDADLIFCPFSYLV 362
Query: 271 NPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQVCSVNPMIY 330
+P+IR + +V +K +++ILDEAHNIED R+A S E
Sbjct: 363 DPLIRNSSDVHVKNSVVILDEAHNIEDTCREAASFTFTEK-------------------- 402
Query: 331 QPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRELQEANISRQCFP---ILLE 387
E+ L+ + +R A + S + ++A ++ +A+I + F + LE
Sbjct: 403 ----ELDDSLLSFRLKRVA------IDNITSNKSAEEAFADVPDASIHMKEFKGHLMYLE 452
Query: 388 CATKAI---KEATDTESELPHLS---GMSVITL--EGLFSSLT-------YFFSRNGSHV 432
T I E+ P S G+ TL E LFSSLT F N
Sbjct: 453 HLTLEILRWVRHVAEEARTPPKSRQEGLKTCTLSSETLFSSLTNAEIGVDLFAPPNTPKH 512
Query: 433 SDYQLALQKYIKR--------DSKNPGGNWTHTLSLWCLNPAVV----FKDVAELSLSII 480
+ + K+ D P + W + ++ + SII
Sbjct: 513 NAIATSFGAITKQNEPEMKEMDQFKPSATAIVVIEKWLYFQSYFGNQQYRPTYSETRSII 572
Query: 481 LTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYK-TAD- 538
L SGTL PM++ +ELG++F +E VI D + +V+ GP + +Y+ T+D
Sbjct: 573 LASGTLCPMDTLKTELGMEFKQQVEGDQVISPD-NIFAAVLPIGPHGNRITCTYRNTSDP 631
Query: 539 ----------------------------GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPK 570
Y+++E+L + + +KK + EP+
Sbjct: 632 ESPFYEEVASIVKYVCTNVPAGILCFLPSYRVLEQLKMCMYKNQSMLHIKSKKVILFEPR 691
Query: 571 GGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVC 630
S+ V+ + +I ++ A GA AV
Sbjct: 692 RSSE--LSAVMDEFDEAIFNPTRFG-----------------------ATINGALMFAVF 726
Query: 631 RGK---------------IVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQA 675
RGK I VGIP+PN D QV+ KK YND +L+G+EWY QA
Sbjct: 727 RGKVSEGIDFADDRARVVISVGIPYPNAMDDQVNAKKMYNDQNSKEMGILNGDEWYTTQA 786
Query: 676 FRALNQAIGRCIRHRFDYGAIILLDERFQEERNR-------AHISKWLRKSIKQYDSF 726
+RALNQA+GRC+RH+ D+GA++++D+R + + ++ A +SKW+R +K Y SF
Sbjct: 787 YRALNQALGRCLRHKNDWGAMLMIDDRLERQTSQLTTGASSARVSKWIRAQLKSYPSF 844
>gi|384483940|gb|EIE76120.1| hypothetical protein RO3G_00824 [Rhizopus delemar RA 99-880]
Length = 762
Score = 240 bits (612), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 149/505 (29%), Positives = 250/505 (49%), Gaps = 90/505 (17%)
Query: 295 IEDIARDAGSVDIDEDVLLKLQMELEQVC--SVNPMIYQPLIEMTQDLVGWIERRKATLA 352
+ED AR AGS ++D+ L L++EL Q+ P ++ L + + WI
Sbjct: 1 MEDAARSAGSFELDDKSLSILKIELTQIIKGGFEPDAHRVLEHLFDGIWEWINSPGNKYD 60
Query: 353 KREFQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDT------------- 399
E++ + W+G K + +L+ NI+ + A K + + ++
Sbjct: 61 IEEYERHINIWSGRKIIDKLKGLNITAHVYEAEFIPAYKTVSQHAESVRRESENIMIDDE 120
Query: 400 -ESELPH--------LSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQK--------- 441
E P LS S+ ++G+F + F ++ +V DY++AL K
Sbjct: 121 LEGSQPEVRVHRQECLSNNSLSIVQGIFMVFGFLFRKDRDYVQDYRMALMKRKEKGNELN 180
Query: 442 --YIKRDSKNPGGN-WTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGV 498
+ K+ +K+ + W++ +S WCLNP ++F+D+ + S+ILTSGTLSPM +F+SEL
Sbjct: 181 VAHSKKSAKSTQDSLWSYKISFWCLNPGIIFQDMCAETRSVILTSGTLSPMETFASELET 240
Query: 499 QFG---------TCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTADGYKLMEKLCNR 549
F + +E+ D + ++ ++ T P Y ++KL R
Sbjct: 241 DFPNGAHLRGVYSNIESFRYQDDVGEAISQIVETVPFGILCFLP-----SYNALDKLMQR 295
Query: 550 WRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNND 609
W TG + KK +F+EP+G ++ FE V+ +Y+ I + C+
Sbjct: 296 WTLTGTLEHIKRKKFVFLEPRGSDKKKFERVINAFYDQIDELVDCS-------------- 341
Query: 610 LNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKKY 654
+ K GA F AV RGK I +G+P+P + DI+VSLKK+Y
Sbjct: 342 --------DDEKDGAIFFAVYRGKVSEGVDFSDAYCRAVIALGLPYPGLKDIEVSLKKEY 393
Query: 655 NDTYRSSKN---LLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAH 711
ND + +++ +++G +WY QA+RA+NQA+GRCIRH+ D+GAIILL++RFQE +
Sbjct: 394 NDLKQRTQHHGGVMNGRDWYATQAYRAMNQALGRCIRHKNDWGAIILLEDRFQESEHIKG 453
Query: 712 ISKWLRKSIKQYDSFDASLEGLKSF 736
+SKW+R + ++SF+ + LK F
Sbjct: 454 LSKWIRNRVHIHESFNEGISSLKEF 478
>gi|242003120|ref|XP_002422617.1| regulator of telomere elongation helicase 1 rtel1, putative
[Pediculus humanus corporis]
gi|212505418|gb|EEB09879.1| regulator of telomere elongation helicase 1 rtel1, putative
[Pediculus humanus corporis]
Length = 1016
Score = 239 bits (611), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 212/772 (27%), Positives = 345/772 (44%), Gaps = 123/772 (15%)
Query: 22 GIQVEFPYQ-PYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQ 80
G V FPY PY Q +M +V++ LD HA+LESPTGTGK+L L AW +
Sbjct: 8 GYDVSFPYPIPYDIQKSYMNKVLTCLDE-----KTHAVLESPTGTGKTLCLFAPVTAWAK 62
Query: 81 NCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKK 140
K KN + +++ +S P Q K+ K
Sbjct: 63 R-KKKNAVVHVTQ--------------------DSNKELNSPHFESTEHQGPWGVKSKSK 101
Query: 141 KMTPTIFYASRTHSQISQVISEYKKTAYR-VPMAVLASRKHYCTNKYV---RDKENIDEE 196
++Y +RTHSQI+Q +SE +K + + V+ +R C N+ V +D +
Sbjct: 102 -----VWYTARTHSQIAQTVSEVRKCDIEGLHVRVMGARDQLCINELVLEEKDSYIKTVK 156
Query: 197 CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMA 256
CK L+ + C + + + + G EV DIEDLV++G+ C Y+ A+ +
Sbjct: 157 CKELVKSKK--CKYYTKLSYEKDFKRFYQSG--EVLDIEDLVSIGKSCGICPYFLAKRAS 212
Query: 257 DDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDE-DVLLKL 315
+ A ++ PY+YII+ R + + ++ ++I DE HN+ ++ DV + +
Sbjct: 213 ETADILLLPYNYIIDRESRESNGLQLQNDVIIFDEGHNVPSTCEESYEFSFTSLDVAIGI 272
Query: 316 QMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRELQEA 375
+ + + S L ++T+DL IE + ++K K L E
Sbjct: 273 KNIQDVMLS--------LSKLTEDL---IEDEEIDVSKHVSNSMMMVEMLQKLESALSEM 321
Query: 376 NISRQCFPI--LLECATKAIK----EATDTESELPHLSGMSVITLEGLFSSLTYFFSRNG 429
N S + P+ L + A+ + ++SE L+G ++ T L ++ + G
Sbjct: 322 NASNELLPVSELYNFLSSAVLIDGISSFKSDSEKLSLTGSTLETFNLLEKMMSVMY---G 378
Query: 430 SHVSDYQLALQKYIKRDSK-----NPGGNWTHTLSLWCLNPAVVFKDVAEL-SLSIILTS 483
S V + ++ + R K +P ++ SL+C NP+ K + L S SII+TS
Sbjct: 379 STVRSFDKSI---VDRSFKCVITTDPERHFAKKFSLYCFNPSFGIKSLLALGSQSIIITS 435
Query: 484 GTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYK-------- 535
GTLSP+ +F ELG+ LE H+ QV ++ TG +N ++ +YK
Sbjct: 436 GTLSPLRTFIYELGLPKPVTLENKHIAK-KCQVPFVILGTGVNNVKMDGAYKNRNDPKYV 494
Query: 536 -------------TADG-------YKLMEKLCNRW-RETGQWSRLNAKKPLFVEPKGGSQ 574
DG Y +M+ L W ++ G W+RLN+ K +FVEP+ ++
Sbjct: 495 SSLGMSLTNLIASIPDGILLLFSSYTMMQSLKESWEKDLGIWTRLNSLKRVFVEPR--NK 552
Query: 575 EDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKI 634
+F +++Y +I G+ ++ R K D CRG
Sbjct: 553 NEFINCMENYRRAIDSGNGAILMGVLRGKISEGMDFKD---------------QYCRGVF 597
Query: 635 VVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQ------AFRALNQAIGRCIR 688
++G+PFP I D++V K+KY+++ E NQ A +A NQAIGR IR
Sbjct: 598 IIGVPFPPIQDLRVIGKQKYSESLMIYNEKTKTEEKLYNQPYLSIEAMKATNQAIGRVIR 657
Query: 689 HRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFRDV 740
H DYG IIL+D RF R +IS WLR +F + + + FF++V
Sbjct: 658 HGKDYGVIILVDYRFAWPRLFYNISSWLRDDFPTESNFPTAKKLISDFFKNV 709
>gi|357130391|ref|XP_003566832.1| PREDICTED: regulator of telomere elongation helicase 1-like
[Brachypodium distachyon]
Length = 872
Score = 238 bits (606), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 201/647 (31%), Positives = 290/647 (44%), Gaps = 118/647 (18%)
Query: 172 MAVLASRKHYCTNKYV---RDKENIDEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGC 228
MAVL SR+ C + V R K + C L R L C +R + L
Sbjct: 1 MAVLGSREQMCIHDEVSKLRGKAQ-NNGCHYLCKKR-LCCHNNIVTEYMRNNSELGS--- 55
Query: 229 HEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAME-VDIKGAIL 287
E DIEDLVN+G+ C YY +R ++ ++F PY+Y+I+P R ++ + A+L
Sbjct: 56 -EPFDIEDLVNIGRTKGPCPYYISRELSKSVDILFAPYNYLIDPGNRRSLTGIPWDNAVL 114
Query: 288 ILDEAHNIEDIARDAGSVDIDEDVLLKLQMELE---QVCSVNPMI-------YQPL-IEM 336
I DEAHN+E I DA S D+ L E + Q+CS I + P +
Sbjct: 115 IFDEAHNLESICADAASFDLLPHNLTSCIAEAQECIQLCSFKRSIENSADKQFDPENYAI 174
Query: 337 TQDLVGWIERRKATLAKREFQHFFSCWTGDKALRELQEANISRQCFPILLEC---ATKAI 393
+ L+ +E++ + L E + G L E NI+ + L+E A+ +
Sbjct: 175 LKALLMALEKKVSELVI-ESKELGYTKPGSYIHEFLSELNITSETSKKLIETIDSASLLL 233
Query: 394 KEATDTESELPHLSGMSVITLEGLFSSLTYFFSRNG--SHVSDYQLALQ--KYIKRDSKN 449
+E E++ + +V LE + L F R G H Y+ + + DS
Sbjct: 234 EEGNSGETKAGVKAKATVSRLETIRDMLDIIF-RGGRQDHAKYYRFHVNESRQASGDSLQ 292
Query: 450 PGGNWTHTLSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPH 508
G T TLS WC NP + ++ +L + SIILTSGTLSP++S + EL ++F LE PH
Sbjct: 293 LFGKATRTLSWWCFNPGLAMEEFLKLGVRSIILTSGTLSPLDSLAMELNLEFPVRLENPH 352
Query: 509 VIDVDLQVLTSVISTGPDNYPLNASYKT---------------------ADG-------Y 540
VI D Q+ V+ GP + LN+SY+T DG Y
Sbjct: 353 VISPD-QIWVGVVPVGPSGHSLNSSYRTRETIKYKQELGLVIVNFARIVPDGLLVFFPSY 411
Query: 541 KLMEKLCNRWR---------ETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQG 591
+M+K + W+ E W R+ K +EP+ S +F ++ Y
Sbjct: 412 SMMDKCIDFWKNRNHEHSVDENTIWQRMCKHKQPVIEPRQSS--NFPDAIEDY------- 462
Query: 592 SKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVV 636
A +R +++ GA F AVCRGK IV
Sbjct: 463 --AAKLR-------------------DSSTSGAIFFAVCRGKVSEGLDFADRAGRAVIVT 501
Query: 637 GIPFPNINDIQVSLKKKYNDTYRSSKNL----LSGNEWYCNQAFRALNQAIGRCIRHRFD 692
G+PF D +V LK+ Y D + N L+G EWY QA RA+NQA+GR IRHR D
Sbjct: 502 GMPFSTPTDPKVRLKRDYLDKQATPSNKNPKGLTGEEWYVQQAARAVNQAVGRVIRHRHD 561
Query: 693 YGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFRD 739
YGAII DERF ++ +S WL+ IK Y + ++ L FFRD
Sbjct: 562 YGAIIYCDERFVWPNYQSQMSYWLKPYIKCYSKYGEVVQTLTKFFRD 608
>gi|407849947|gb|EKG04513.1| helicase, putative [Trypanosoma cruzi]
Length = 951
Score = 237 bits (604), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 225/852 (26%), Positives = 343/852 (40%), Gaps = 215/852 (25%)
Query: 15 LNAYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCS 74
+++ + + V FP+ PY +Q+ +M VI L+ G C+ALLESPTGTGK+L LLCS
Sbjct: 1 MSSISIADVGVSFPFNPYPAQVEYMRAVIDALN-----GRCNALLESPTGTGKTLCLLCS 55
Query: 75 TLAWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMN 134
LAW + G T Q
Sbjct: 56 ALAWLEK------------------------------------------RRGMTQQ---- 69
Query: 135 NKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYR--VPMAVLASRKHYCTNKYVRDKEN 192
++ + Y SRTH+Q+ QVI E K+T Y M++L SR+H C N V
Sbjct: 70 RYQIEGAGRTRVIYCSRTHAQLRQVIRELKRTRYGDIFSMSLLGSREHMCVNSQVLRLPT 129
Query: 193 IDEE---CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSY 249
+ C L ++ C ++ H + K G VHD+EDLV+ G+ C Y
Sbjct: 130 AQAQQSMCNTLREEKK--CRFYRGFQARNDHNTAVKDG-KWVHDMEDLVSDGRKCGYCPY 186
Query: 250 YAARSMADDAQLVFCPYSYIIN------------------------PVIRGA------ME 279
Y+ R A +A +VF PY+Y+ + P + GA
Sbjct: 187 YSEREEAKEADIVFLPYNYVFDLSIRKQLPFNLKGSILIVDEAHNLPSVLGASSCMNLQP 246
Query: 280 VDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQVCSVNPMIYQPLIEMTQD 339
+++ AI A ++ I D + D + L + E + + + + E QD
Sbjct: 247 LELTNAIHDCSRAIEMKRILMDTAAADDNSQDGLMDEQEFASLKIILCRLESCIAEENQD 306
Query: 340 LVGWIERRKATLAKREFQHFFSCWTGDKALRE-------LQEANISRQCF--------PI 384
+ K ++ E G + +RE L +A I+R F
Sbjct: 307 -----DEEKKKMSSHEVT---GSLPGVEIVREGSYMIPFLSKALITRDLFFGANNQHGGG 358
Query: 385 LLECATKAIKEATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIK 444
+ + TKAI + +ES + + L + L + + R S + + + +K
Sbjct: 359 INDVITKAIAVLSQSES--------AALGLSKVQQFLNFVYERCESDDDEAYRFILRGVK 410
Query: 445 RDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCL 504
N G N +L WCL+ + K + S++LTSGTLSP+ F++ELG++FG L
Sbjct: 411 --GANRGSN-QRSLGYWCLDTSCAVKTLVAGLNSLLLTSGTLSPLEHFAAELGIEFGVSL 467
Query: 505 EAPHVIDVDLQVLTSVISTGPDNYPLNASYK---------------------TADG---- 539
+ HVI + QVL V+ GP LN +Y T G
Sbjct: 468 KGAHVIQQN-QVLGCVLCKGPSGEKLNGAYAYRNSVDYRVGLGMSLVNISRNTPGGVLVF 526
Query: 540 ---YKLMEKLCNRWRE-TGQ-------WSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSI 588
Y + WR +G+ W L KP+FVEP S D + ++ + +
Sbjct: 527 FPSYVALNAAIELWRAGSGRPGESLTVWGMLEDLKPVFVEPVEAS--DLQTIVSRFQREV 584
Query: 589 SQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKI-------------- 634
++A +GA LAVCRGKI
Sbjct: 585 ----------------------------DSAPSRGAILLAVCRGKISEGIDFADNHGRCV 616
Query: 635 -VVGIPFPNINDIQVSLKKKYNDTYRSSK-----NLLSGNEWYCNQAFRALNQAIGRCIR 688
V GIPF N D+ V LK++Y S + L +G++WY +A RA+NQ +GR IR
Sbjct: 617 VVAGIPFANHTDLFVRLKREYLTRVASHRPKVRGKLFTGDDWYMTEAMRAVNQCVGRVIR 676
Query: 689 HRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSF---FRDVKGWVG 745
H+ DYG I+L DERF E + +S+W+ Y F + + F FR G V
Sbjct: 677 HKDDYGVILLADERFAERLD--GLSEWVANRCSIYREFREAYASVAQFFASFRRRSGDVA 734
Query: 746 KKMFNGLENSDN 757
F+ + D+
Sbjct: 735 PPFFSSFGSVDS 746
>gi|82752532|ref|XP_727340.1| DNA repair helicase [Plasmodium yoelii yoelii 17XNL]
gi|23483134|gb|EAA18905.1| DNA repair helicase, putative [Plasmodium yoelii yoelii]
Length = 1069
Score = 228 bits (581), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 220/858 (25%), Positives = 362/858 (42%), Gaps = 206/858 (24%)
Query: 18 YHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLA 77
Y + ++V FPY+ Y Q +M V++ L + + +A+LESPTGTGK+L LLC++++
Sbjct: 21 YTINDVEVCFPYELYDCQYNYMLSVLNALKKKE-----NAILESPTGTGKTLCLLCASIS 75
Query: 78 WQQNCKLK----NQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAM 133
+ N K N+ NI +K + GF + NG +
Sbjct: 76 YLVNVLEKKGHFNESINIRENKSNV---------SFGF---------KENDNGPKKAI-- 115
Query: 134 NNKNVKKKMTPTIFYASRTHSQISQVISEYKKT-------AYRVPMAVLASRKHYCTNKY 186
K P I YASRTHSQ+ QVI E K Y++ +L SR C +
Sbjct: 116 ------KADYPKIIYASRTHSQLKQVIKELKNVYFIKNNEKYKLLTTILGSRDQLCVH-- 167
Query: 187 VRDKENIDEECKLLLGDRNLGCPQFKNVHKVRGHPSLQ-----KGGCHEVHDIEDLV--- 238
NI CK + N C + + + H L+ K D+E L
Sbjct: 168 -----NISYNCKGTM--LNNMCKRVRKSGECMYHNGLKHLYKYKHLFTTPMDVETLNEIG 220
Query: 239 ----NVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHN 294
+VGQ + C +YA R + ++ ++ PY+Y+ R +++D++ I+I+DE HN
Sbjct: 221 KGNNSVGQNIHFCPFYATREIQNECHVILLPYNYLFEENTRRILKLDLENCIIIIDEGHN 280
Query: 295 IEDIARDAGSVDI-DEDVLLKLQ------MELEQVCSVNPMIYQP--------LIEMTQD 339
IE++A +A S I D D+ L L+ LE+V ++ I + L
Sbjct: 281 IENVAEEAVSFKIRDSDLNLFLESIKATLTILEKVNDIDKEIQEKINVDELFILNRSINS 340
Query: 340 LVGWIE-RRKATLAKREFQHFFSCWTGDKALRELQEANIS---------RQCFPILLECA 389
L+ W++ R K++ + + G+K + NI+ ++E
Sbjct: 341 LITWLDNERLERNDKKKIKERHKTYEGNKIFDIFENNNINISKSNFENFNNLLSNMIELL 400
Query: 390 TKAIKEATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDY-QLAL--QKYIKRD 446
K I + ++ ++ +++ + T++ + + + FS + +Y QL + +K + D
Sbjct: 401 NKYINDFKLSQMDVKNVNKY-IATIDNVKKAFSILFSDIVKNCIEYFQLYINEEKVLYND 459
Query: 447 SKNPGGNWTH-----------------------TLSLWCLNP-AVVFKDVAELSLSIILT 482
S +P + H T+SL C + A + + E SII+T
Sbjct: 460 SNDPNKVYDHMKKFTKIKTKIGYDNQNNYTMSKTISLLCFSATASLCGIIKEKVNSIIVT 519
Query: 483 SGTLSPMNSFSSELG---VQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPL-------NA 532
SGTLSP+ FS +L F LE HVI Q+ ++ + L N
Sbjct: 520 SGTLSPVEPFSKQLSGSYFSFHHILENDHVIKSH-QLFVGCMTHYNNQLLLSTYENRSNE 578
Query: 533 SYKTADG--------------------YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGG 572
+Y A G Y M + W++ + ++N+ K +FVEP
Sbjct: 579 NYIKALGNCIFDIIACIPFGVLIFFSSYSSMTETVATWKKLKIFDKINSYKTIFVEPNKA 638
Query: 573 SQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRG 632
+ D + +L Y N +++KKR KGA + VCRG
Sbjct: 639 A--DLKDILFQYEN---------IIKKKR--------------------KGAILMGVCRG 667
Query: 633 K---------------IVVGIPFPNINDIQVSLKKKYNDTYRSS-------------KNL 664
K I+ G+P+ N+ D ++ K+++ D ++S N
Sbjct: 668 KISEGIDFKDDCCRGVIICGLPYGNVYDSKIIFKREFLDNFKSEITESNNSSETNNDNNT 727
Query: 665 LSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYD 724
GN+WY +A R++NQ+IGR IRH+ DYGAI+ LD RF + ISKW+R + Y
Sbjct: 728 SKGNKWYNEEAMRSINQSIGRVIRHKDDYGAILFLDSRFSNNQRIKEISKWVRAHFRVYR 787
Query: 725 SFDASLEGLKSFFRDVKG 742
D ++ FF KG
Sbjct: 788 DIDQIQNDIEKFFELFKG 805
>gi|414881659|tpg|DAA58790.1| TPA: regulator of telomere elongation helicase 1 [Zea mays]
Length = 619
Score = 225 bits (573), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 200/681 (29%), Positives = 308/681 (45%), Gaps = 134/681 (19%)
Query: 18 YHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLA 77
Y + G+ V+FP+ Y Q+ +M RVI +L + + +ALLESPTGTGK+L LLC++LA
Sbjct: 4 YSIRGVNVDFPFDAYDCQITYMDRVIESLQQGK-----NALLESPTGTGKTLCLLCASLA 58
Query: 78 WQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKN 137
W++ T + GGG + +P + +Q + ++ +
Sbjct: 59 WRR-----------------TFGEFLRVGRGGGGTKQ-----LPYGSQPSASQQSEDSTS 96
Query: 138 VKKKMT--PTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYV-----RDK 190
K++ + P I YASRTHSQ+ QVI E K T+YR MAVL SR+ C + V R +
Sbjct: 97 QKQQQSRYPVIIYASRTHSQLRQVIKELKATSYRPKMAVLGSREQMCIHDEVSKLHGRAQ 156
Query: 191 ENIDEECKLLLGDRNLGCPQFKNVHK-VRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSY 249
N C L R CP +V + ++ P L +E DIEDL+N+G+ C Y
Sbjct: 157 NN---ACHFLCKKRR--CPHNNHVAEFIKNKPELG----NEPFDIEDLINIGRHKGPCPY 207
Query: 250 YAARSMADDAQLVFCPYSYIINPVIRGAME-VDIKGAILILDEAHNIEDIARDAGSVDID 308
Y +R ++ ++F PY+Y+I+P R ++ + A+LI DEAHN+E I DA S D+
Sbjct: 208 YISRELSKSVDILFAPYNYLIDPGNRRSLNGIPWDNAVLIFDEAHNLESICADAASFDLF 267
Query: 309 EDVLLKLQMELEQ---VCSVNPMI-------YQPL-IEMTQDLVGWIERRKATLAKREFQ 357
+ L E + +CS I + P + + L+ +E++ A L
Sbjct: 268 PNNLTACIAEAHECIKLCSAKRSIENSADKQFDPENYAILKALLMALEKKIAELLIGSEL 327
Query: 358 HFFSCWTGDKALRELQEANISRQCFPILLE---CATKAIKEATDTESELPHLSGMSVITL 414
+ G L E NI+ L+E CA+ ++E ++ + +V L
Sbjct: 328 GYTK--AGSYIYDFLSELNITSDTSKKLIETIDCASLLLEEGNSAQTGPGVQAKAAVSRL 385
Query: 415 EGLFSSLTYFFSRNG-SHVSDYQLALQ--KYIKRDSKNPGGNWTHTLSLWCLNPAVVFKD 471
E + L F G +H Y+ + + D+ G + TLS WC NP + ++
Sbjct: 386 ESIRDMLDIIFRGGGQNHAKYYRFHVNESQQTHGDALKFLGKSSRTLSWWCFNPGLAMEE 445
Query: 472 VAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPL 530
+L + SIILTSGTLSP++S + EL ++F LE PHVI D QV V+ GP + L
Sbjct: 446 FLKLGVRSIILTSGTLSPLDSLAMELNLEFPVRLENPHVISSD-QVWVGVVPVGPSGHAL 504
Query: 531 NASYKT---------------------ADG-------YKLMEKLCNRWR---------ET 553
N+SY+T DG Y +M+ + W+ E
Sbjct: 505 NSSYRTRNTIQYKQELGTAIVNFARIVPDGLLVFFPSYSMMDMCVDFWKNRNHSNSASEN 564
Query: 554 GQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTI 613
W R+ K +EP+ S +F+ ++ Y + S
Sbjct: 565 TIWQRICKHKQPVIEPRQSS--NFQSAIEDYRAKLHDSS--------------------- 601
Query: 614 ESQENANKKGASFLAVCRGKI 634
GA F AVCRGK+
Sbjct: 602 --------SGAIFFAVCRGKV 614
>gi|226494081|ref|NP_001152397.1| regulator of telomere elongation helicase 1 [Zea mays]
gi|195655863|gb|ACG47399.1| regulator of telomere elongation helicase 1 [Zea mays]
Length = 619
Score = 224 bits (572), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 200/682 (29%), Positives = 308/682 (45%), Gaps = 134/682 (19%)
Query: 17 AYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
Y + G+ V+FP+ Y Q+ +M RVI +L + + +ALLESPTGTGK+L LLC++L
Sbjct: 3 VYSIRGVNVDFPFDAYDCQITYMDRVIESLQQGK-----NALLESPTGTGKTLCLLCASL 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNK 136
AW++ T + GGG + +P + +Q + ++
Sbjct: 58 AWRR-----------------TFGEFLRVGRGGGGTMQ-----LPYGSQPSASQQSEDST 95
Query: 137 NVKKKMT--PTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYV-----RD 189
+ K++ + P I YASRTHSQ+ QVI E K T+YR MAVL SR+ C + V R
Sbjct: 96 SQKQQQSRYPVIIYASRTHSQLRQVIKELKATSYRPKMAVLGSREQMCIHDEVSKLHGRA 155
Query: 190 KENIDEECKLLLGDRNLGCPQFKNVHK-VRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCS 248
+ N C L R CP +V + ++ P L +E DIEDL+N+G+ C
Sbjct: 156 QNN---ACHFLCKKRR--CPHNNHVAEFIKNKPELG----NEPFDIEDLINIGRHKGPCP 206
Query: 249 YYAARSMADDAQLVFCPYSYIINPVIRGAME-VDIKGAILILDEAHNIEDIARDAGSVDI 307
YY +R ++ ++F PY+Y+I+P R ++ + A+LI DEAHN+E I DA S D+
Sbjct: 207 YYISRELSKSVDILFAPYNYLIDPGNRRSLNGIPWDNAVLIFDEAHNLESICADAASFDL 266
Query: 308 DEDVLLKLQMELEQ---VCSVNPMI-------YQPL-IEMTQDLVGWIERRKATLAKREF 356
+ L E + +CS I + P + + L+ +E++ A L
Sbjct: 267 FPNNLTACIAEAHECIKLCSAKRSIKNSADKQFDPENYAILKALLMALEKKIAELLIGSE 326
Query: 357 QHFFSCWTGDKALRELQEANISRQCFPILLE---CATKAIKEATDTESELPHLSGMSVIT 413
+ G L E NI+ L+E CA+ ++E ++ + +V
Sbjct: 327 LGYTK--AGSYIYDFLSELNITSDTSKKLIETIDCASLLLEEGNSAQTGPGVQAKAAVSR 384
Query: 414 LEGLFSSLTYFFSRNG-SHVSDYQLALQ--KYIKRDSKNPGGNWTHTLSLWCLNPAVVFK 470
LE + L F G +H Y+ + + D+ G + TLS WC NP + +
Sbjct: 385 LESIRDMLDIIFRGGGQNHAKYYRFHVNESQQTHGDALKFLGKSSRTLSWWCFNPGLAME 444
Query: 471 DVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYP 529
+ +L + SIILTSGTLSP++S + EL ++F LE PHVI D QV V+ GP +
Sbjct: 445 EFLKLGVRSIILTSGTLSPLDSLAMELNLEFPVRLENPHVISSD-QVWVGVVPVGPSGHA 503
Query: 530 LNASYKT---------------------ADG-------YKLMEKLCNRWR---------E 552
LN+SY+T DG Y +M+ + W+ E
Sbjct: 504 LNSSYRTRNTIQYKQELGTAIVNFARIVPDGLLVFFPSYSMMDMCVDFWKNRNHSNSASE 563
Query: 553 TGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNT 612
W R+ K +EP+ S +F+ ++ Y + S
Sbjct: 564 NTIWQRICKHKQPVIEPRQSS--NFQSAIEDYRAKLHDSS-------------------- 601
Query: 613 IESQENANKKGASFLAVCRGKI 634
GA F AVCRGK+
Sbjct: 602 ---------SGAIFFAVCRGKV 614
>gi|255088938|ref|XP_002506391.1| predicted protein [Micromonas sp. RCC299]
gi|226521663|gb|ACO67649.1| predicted protein [Micromonas sp. RCC299]
Length = 644
Score = 221 bits (563), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 197/671 (29%), Positives = 284/671 (42%), Gaps = 119/671 (17%)
Query: 25 VEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCKL 84
V+FPY Y Q+ M RV+ L + +ALLESPTGTGK+L LLC+ L W++
Sbjct: 19 VDFPYDAYDCQVTMMERVVEALHAGE-----NALLESPTGTGKTLCLLCAALGWREK--- 70
Query: 85 KNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKKMTP 144
+H+ GGG P+ T+ P A A + P
Sbjct: 71 -------AHA-------------GGG--PDD--VTVGPDA---RAAAAARGDDRAPDRGP 103
Query: 145 TIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEECKLLLGDR 204
I YASRTHSQ++QVI E + T YR MA++ SR+ C +K VR + +
Sbjct: 104 LIVYASRTHSQLAQVIRELRATRYRPRMAIMGSRQQMCVHKDVRVLAGAAQNAACKARTQ 163
Query: 205 NLGCPQFKNV-HKVRGHPSLQKGGCHEVHDIEDLVNVGQ------VVRGCSYYAARSMAD 257
+ C + H R P+ G + DIEDLV +G+ C Y+ + M
Sbjct: 164 SRSCAHHNELEHFRRREPNF---GRDDPVDIEDLVKLGERGVVGGGCGPCPYFMSLDMYK 220
Query: 258 DAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQM 317
+A +VF PY+Y+++P +R + + GAI++ DEAHNIE + DA DI L +
Sbjct: 221 EADIVFMPYNYVVDPAMRDVLGDRLDGAIVLFDEAHNIESVCSDAAGFDIPASHLAQAIN 280
Query: 318 ELEQVCSVNPMIY--------QPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKAL 369
E ++ +P E Q L G + + +A + + C + L
Sbjct: 281 EAQEAFEAAGADPGADARKPPRPAAEYKQ-LRGVLLALEDKVAAQVGNNGEECVKPGEWL 339
Query: 370 RELQEA-NISRQCFPILLECATKAI-----KEATDTESELPHLSGMSVITLEGLFSSLTY 423
EL + I+ Q ++ A A + A + SG + L
Sbjct: 340 FELLASLKITEQTLEMIKSIAQDAASLLAGEAAAVGQRSRARASGYRINELAEALE--LA 397
Query: 424 FFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSL-SIILT 482
F +R HV ++L + R G TLS WC +P+V +AE + S+ILT
Sbjct: 398 FRARREGHVGSFRLRIGADESRGGFGAGHGAGPTLSFWCFSPSVTMSHLAEKGVKSVILT 457
Query: 483 SGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTAD---- 538
SGTLSPM+SF+SELG+ F LE PHV+ QV V+ GP LN++Y+ D
Sbjct: 458 SGTLSPMSSFASELGLNFRVRLENPHVV-APHQVWGGVVPVGPSGKRLNSTYRFRDTDEY 516
Query: 539 ------------------------GYKLMEKLCNRWRETGQ---WSRLNAKKPLFVEPKG 571
Y +M WR TG W R+ A K VEP G
Sbjct: 517 KSELGNVVVNFARIVPDGMLVFFPSYGVMRACVEHWRNTGTPSIWERICASKHAVVEPSG 576
Query: 572 GSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCR 631
+E+F K + N+ L + GA+F AVCR
Sbjct: 577 --KEEFREAFKEF----------------------NDALEATPGGGAGGRNGAAFFAVCR 612
Query: 632 GKIVVGIPFPN 642
GK+ GI F +
Sbjct: 613 GKVSEGIDFAD 623
>gi|221060536|ref|XP_002260913.1| DNA-repair helicase [Plasmodium knowlesi strain H]
gi|193810987|emb|CAQ42885.1| DNA-repair helicase, putative [Plasmodium knowlesi strain H]
Length = 1106
Score = 221 bits (562), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 218/897 (24%), Positives = 368/897 (41%), Gaps = 228/897 (25%)
Query: 6 NPNPNYRKPLNAYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGT 65
N + N+R Y + ++V FPY+ Y Q +M V++ L + + +A+LESPTGT
Sbjct: 14 NEDVNHR-----YTINDVEVYFPYELYDCQYNYMLSVLNALKKKE-----NAILESPTGT 63
Query: 66 GKSLSLLCSTL-----------AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPE 114
GK+L LLC+++ A+ +N + NIS + E
Sbjct: 64 GKTLCLLCASISYLVDVLEKKGAFSENINITENKKNISLDFKENEN------------SR 111
Query: 115 SQPSTIPPSTNGQTAQVAMNNKNVKKKMTPTIFYASRTHSQISQVISEYKKT-------A 167
S P P+ + P I YASRTHSQ+ QVI E K
Sbjct: 112 SSPPKASPAND-----------------FPKIIYASRTHSQLKQVIKELKNVYFIKNNEK 154
Query: 168 YRVPMAVLASRKHYCTNK--YVRDKENIDEECKLLLGDRNLGCPQ---FKNVHKVRGHPS 222
Y++ +L SR C + Y ++ CK +N C K ++K++ H
Sbjct: 155 YKLLTTILGSRDQLCVHNINYNYKGTMLNNMCKR--ARKNGECMYHNGLKYLYKLK-HLF 211
Query: 223 LQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDI 282
+ +I +VGQ + C +YA R + ++ ++ PY+Y+ R +++++
Sbjct: 212 TIPMDVETLSEIGKGNSVGQNIHFCPFYATREIQNECHVILLPYNYLFEESTRKILKLNL 271
Query: 283 KGAILILDEAHNIEDIARDAGSVDI-DEDVLLKL----------------QMELEQVCSV 325
+ +I+I+DE HNIE +A +A S I D D+ L L E+ + SV
Sbjct: 272 ENSIIIIDEGHNIETVAEEAVSFKIKDSDLNLFLDGIKATLTVLDKVKDVDKEMRERISV 331
Query: 326 NPMIYQPLIEMTQDLVGWIERRKATLA-KREFQHFFSCWTGDKALRELQEANI-----SR 379
+ + L L+ W+E + ++ K + + + G + Q+ NI +
Sbjct: 332 DELF--KLNRSITALISWLENERLEISGKNKIKEKHKTYEGKEIFDIFQKNNINITKDNF 389
Query: 380 QCFPILLECAT----KAIKEATDTESELPHLSGMSVITLEGLFSSLTYFFS---RN---- 428
+ F LL C + I + T ++ +++ + T++ + S + FS RN
Sbjct: 390 EKFHTLLTCMVELLNRYINDFKITAMDVKNINKY-IATIDNIRKSFSILFSDVVRNCIEY 448
Query: 429 --------------GSHVSDYQLALQKYIKRDSKNPGGNWTHTL----SLWCLNPAVVFK 470
+ VS ++K+ K +K + +T+ SL C +
Sbjct: 449 FQLFINEEKVPYTECADVSKVYDNMKKFTKSKTKIVYDKYNYTMSKNISLLCFSATASLC 508
Query: 471 DVAELSL-SIILTSGTLSPMNSFSSELG---VQFGTCLEAPHVID-----------VDLQ 515
+ + + SII+TSGTLSP+ FS +L F LE HVI + Q
Sbjct: 509 GILKEKVNSIIVTSGTLSPIEPFSKQLSGNYFSFKHILENDHVIKSHQLFVGCMTHYNNQ 568
Query: 516 VLTSVIST-GPDNYPLNASYKTAD--------------GYKLMEKLCNRWRETGQWSRLN 560
+L S DNY D Y M + N W++ + ++N
Sbjct: 569 ILLSTYENRSNDNYIQALGNCIFDLIICIPYGVLIFFSSYSSMTETVNAWKKFKIFEKIN 628
Query: 561 AKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENAN 620
+ K +FVEP ++ + +L+ Y +++KKR
Sbjct: 629 SYKTIFVEPNKAAE--LKDILQQYE---------YIIKKKR------------------- 658
Query: 621 KKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKKYNDTYR------ 659
KGA + VCRGK I+ G+P+ N+ D ++ KK++ D ++
Sbjct: 659 -KGAILMGVCRGKISEGIDFKDDCCRGVIICGLPYGNVYDSKIIFKKEFLDNFKYEFSPP 717
Query: 660 -----------------SSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDER 702
+ N+ GN+WY +A R++NQ+IGR IRH+ DYG+I LD R
Sbjct: 718 NDILGGDNGAGALSNNTTLSNISKGNKWYNEEAMRSINQSIGRVIRHKNDYGSIFFLDSR 777
Query: 703 FQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFRDVKGWVGKKMFNGLENSDNDV 759
F + ISKW+R + Y + + FF ++F G+E ++ DV
Sbjct: 778 FSNNQRIKEISKWVRTHFRIYRDIEQIQSDIDKFF---------ELFKGIEQNNLDV 825
>gi|449529467|ref|XP_004171721.1| PREDICTED: regulator of telomere elongation helicase 1-like,
partial [Cucumis sativus]
Length = 695
Score = 221 bits (562), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 199/703 (28%), Positives = 311/703 (44%), Gaps = 154/703 (21%)
Query: 18 YHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLA 77
Y + GI V+FP+ Y QLV+M +VI +L C+ALLESPTGTGK+L LLC+TLA
Sbjct: 4 YTIRGIDVDFPFDAYDCQLVYMEKVIQSLQEK-----CNALLESPTGTGKTLCLLCATLA 58
Query: 78 WQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKN 137
W+++ G F S ++ S N + +++++
Sbjct: 59 WRKSL--------------------------GEF---SSGRSVSNSQNIEGDPNVLSSQS 89
Query: 138 VKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYV-----RDKEN 192
K PTI Y +RTHSQ+ QVI E KKT+YR M VL SR+ C ++ V R + N
Sbjct: 90 TSPKH-PTIVYTTRTHSQLRQVIQELKKTSYRPKMVVLGSREQLCIHEDVSLLRGRTQNN 148
Query: 193 IDEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAA 252
C+ L R G K+ ++V G+ E DIEDLV +G+ C YY +
Sbjct: 149 ---ACRSLC--RKSGKRHCKHYNRVSGYVKENPHLGDEPIDIEDLVKIGKSFGPCPYYVS 203
Query: 253 RSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVL 312
R + ++F PY+Y+I+ R ++ ++ K ++LI DEAHN+E I DA S D+ +L
Sbjct: 204 RELHKAVDIMFAPYNYLIDRGYRKSLVLEWKNSVLIFDEAHNLESICADAASFDLTSWLL 263
Query: 313 LKLQMELEQVCSV-------------NPMIYQPLIEMTQDLVGWIERRKATLAKREFQHF 359
E + + NP + L + L+ +E+ + + +
Sbjct: 264 TACISEAKNCIDLSIKRRDESNDKSGNPDNFAIL----RALLLKLEKGISDIPIHSKELG 319
Query: 360 FSCWTGDKALRELQEANISRQC---FPILLECATKAIKEATDTESELPHLSGMSVITLEG 416
F+ G L E NI+ + ++E A ++E D + ++ + LE
Sbjct: 320 FTK-PGPYIYELLAELNITHESASKLKGIIEEAAILLEE--DKQQKIQNTG----CRLEN 372
Query: 417 LFSSLTYFF-SRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAEL 475
+ L F ++ +H YQ+ +Q+ G + TLS WC NP + + +
Sbjct: 373 ITDILDIVFREKDNAHAKFYQVHVQENEASAMDGLKGKASRTLSWWCFNPGIALEAFPKK 432
Query: 476 SL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASY 534
+ SIILTSGTLSP++SF+ EL + F LE PHVI + Q+ V+S GP N+SY
Sbjct: 433 EVGSIILTSGTLSPLDSFAQELKLDFPIRLENPHVISSN-QIWAGVVSVGPSGCSFNSSY 491
Query: 535 --KTADGYKL--------------------------MEKLCNRWR------ETGQWSRLN 560
+ ++ YKL +++ + W+ T W R++
Sbjct: 492 WNRESEAYKLDLGNAIVNFARIVPDGLLVFFPSYYFLDQCISCWKNQSLSSSTTIWERIS 551
Query: 561 AKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENAN 620
K +EP+ S F ++ Y + E+ +
Sbjct: 552 KHKKPVIEPRQSSL--FPSSIEDYMFKL----------------------------EDTS 581
Query: 621 KKGASFLAVCRGK---------------IVVGIPFPNINDIQV 648
GA F AVCRGK I+ G+PF + ND +V
Sbjct: 582 SSGAVFFAVCRGKVSEGLDFADHAGRAVIITGMPFASRNDPKV 624
>gi|307108452|gb|EFN56692.1| hypothetical protein CHLNCDRAFT_57565 [Chlorella variabilis]
Length = 1523
Score = 218 bits (554), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 132/383 (34%), Positives = 195/383 (50%), Gaps = 69/383 (18%)
Query: 18 YHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLA 77
Y +GG QV FP++ YG QL FM +VI+ L+ GH +ALLE+PTG+GK+LSLLCS LA
Sbjct: 4 YTIGGCQVHFPHKAYGVQLSFMNKVIAALE----GGH-NALLEAPTGSGKTLSLLCSALA 58
Query: 78 WQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKN 137
WQ + K ++ ++ A + PP G +A A +
Sbjct: 59 WQ--VREKQRIEEGLAAEKAAAAEAAAGGGDPAAAAMGEAGQGPPCPLGGSAGCAHPGSS 116
Query: 138 ----------------------------VKKKMTPTIFYASRTHSQISQV---------- 159
++ P IFYA+RTHSQI+Q
Sbjct: 117 SGCGPSAAAEAGAGDGGFMADAAAQEAPAPRRKPPKIFYATRTHSQIAQARRRGGLVSGG 176
Query: 160 ---------------ISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEECKLLLGDR 204
+ E K+ Y+ MAVL SRKHYC N++ + +IDE C+ LL +
Sbjct: 177 GGGVLGGGGGAGAVVVKELKRCEYKPRMAVLGSRKHYCINQHATRQGSIDEACEELLKES 236
Query: 205 NLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFC 264
C FKNVH + G + +HDIEDL +G+ + C YY AR AD+A+++F
Sbjct: 237 Q--CQYFKNVHSF-----VSSGFQYRLHDIEDLKGMGRSNKACPYYTARKWADEAEVIFA 289
Query: 265 PYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQVCS 324
PYSY+I+PVIR AM VD++G +L+ DEAHN+ED+ R+A S ++D + ++ ++
Sbjct: 290 PYSYLIDPVIRRAMAVDVEGCMLVFDEAHNMEDVCREAASTEVDLATMAEVLGCFQKAHD 349
Query: 325 VNPM--IYQPLIEMTQDLVGWIE 345
+N +Y PL+ + +V W+E
Sbjct: 350 LNGRQEVYGPLVGCARAVVAWME 372
Score = 160 bits (404), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 111/326 (34%), Positives = 163/326 (50%), Gaps = 67/326 (20%)
Query: 458 LSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVL 517
+ LWC+NPAV F+ VA+ + S++LTSGTL+P+ F+SELG F LEAPHV+D+ QV
Sbjct: 566 MCLWCMNPAVAFRPVAQAAHSVVLTSGTLAPLEGFASELGTPFAITLEAPHVVDMRRQVW 625
Query: 518 TSVISTGPDNYPLNASYK---------------------TADG-------YKLMEKLCNR 549
V+ GP PLNA++K DG Y L++KL R
Sbjct: 626 AGVVGAGPGGTPLNATWKNQNEAGFQDGVGRLILEGAASIPDGLLVFLPSYVLLDKLMAR 685
Query: 550 WRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNND 609
W+ +G ++L A K + EP+GG Q+ + ++ YY +I G A R K D
Sbjct: 686 WKFSGLLAQLEALKKVVQEPRGGGQDALKKTMQEYYAAIQAGGGAAFFAVCRGKVSEGLD 745
Query: 610 LNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSGNE 669
+ NA RG I+VGIPFP D++V KK +ND + +L+SG+
Sbjct: 746 F----ADGNA-----------RGVIIVGIPFPAAKDLKVQEKKAFNDRGQRQLSLVSGDV 790
Query: 670 WYCNQAFRALNQA-------IGR------CIR-HRFDYGAIILLDERFQEERNRAHISKW 715
WY QAFRALNQA +GR C + R D + L R R R
Sbjct: 791 WYSQQAFRALNQAGWPGRRLMGRPMPLSSCGKLSRVDAARLTSLPAR----RRR------ 840
Query: 716 LRKSIKQYDSFDASLEGLKSFFRDVK 741
+R ++ + +F+A ++ + +FF ++
Sbjct: 841 VRGALAVHPTFEAGMQSMAAFFAAIQ 866
>gi|390462826|ref|XP_002747823.2| PREDICTED: LOW QUALITY PROTEIN: regulator of telomere elongation
helicase 1 [Callithrix jacchus]
Length = 1823
Score = 217 bits (552), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 172/616 (27%), Positives = 261/616 (42%), Gaps = 164/616 (26%)
Query: 231 VHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILD 290
+ DIEDLV G R C YY +R++ A ++F PY+Y+++ R A +D+KG ++ILD
Sbjct: 324 ILDIEDLVKSGSRHRVCPYYLSRNLKQQADIIFMPYNYLLDAKSRRAHSIDLKGTVVILD 383
Query: 291 EAHNIEDIARD-----------AGSVDIDEDVLLK----------------------LQM 317
EAHN+E I + A +D+ + VL + L M
Sbjct: 384 EAHNVEKICEESASFDLTPQDLASGLDVIDRVLEEQTKAAQQGEPHPEFSADTPSSGLNM 443
Query: 318 ELEQVCSVNPMIYQPL------IEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRE 371
ELE + + MI L IE+ D G + G
Sbjct: 444 ELEDIAKLK-MILLRLEGAIDAIELPGDNSGVTK------------------PGSYIFEL 484
Query: 372 LQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVIT------------------ 413
EA ++ Q +L+ + I+ + +G+ +
Sbjct: 485 FAEAQLTFQTKGCILDSLDQIIQHLAGRAGVFTNTAGLQKLADIIQIVFSVDPSEFGPDF 544
Query: 414 LEGLFSSLTYFFSRNGSHVSDYQLALQK---YIKRDSKNPGGNWTHTLSLWCLNPAVVFK 470
LEGL + +Y + H + + A Q+ + ++ PG LS WC +P +
Sbjct: 545 LEGLGALRSYKVHIH--HDAGHWRAAQQSDAWSTTAARKPG----KVLSYWCFSPGHSMR 598
Query: 471 DVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYP 529
++ + ++ILTSGTL+P++SF+ E+ + F CLE PH+ID Q+ V+ GPD
Sbjct: 599 ELVRQGVRTLILTSGTLAPVSSFALEMQIPFPVCLENPHIIDKH-QIWVGVVPRGPDGAQ 657
Query: 530 LNASYKTA----------------------------DGYKLMEKLCNRWRETGQWSRLNA 561
L++++ Y +MEK WR ++ A
Sbjct: 658 LSSAFDRRYSEECLSSLGKALGNIARVVPYGLLVFFPSYPVMEKSLEFWRARDFARKIEA 717
Query: 562 KKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANK 621
KPLFVEP+ S+ F + YY +RV G+
Sbjct: 718 LKPLFVEPR--SKGSFSETISAYY--------------ERVTSPGST------------- 748
Query: 622 KGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKKYNDTYR----SSK 662
GA+FLAVCRGK IV G+P+P D +V LK ++ D + +
Sbjct: 749 -GAAFLAVCRGKASEGLDFSDTNGRGVIVTGLPYPPRMDPRVVLKMQFLDEMKGQGGAGG 807
Query: 663 NLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQ 722
LSG EWY QA RA+NQAIGR IRHR DYGA+ L D RF RA + W+R ++
Sbjct: 808 QFLSGQEWYRQQASRAVNQAIGRVIRHRQDYGAVFLCDHRFAFADARAQLPSWVRPHVRV 867
Query: 723 YDSFDASLEGLKSFFR 738
Y++F + + FFR
Sbjct: 868 YNNFGHVIRDVVQFFR 883
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 93/171 (54%), Gaps = 22/171 (12%)
Query: 22 GIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQN 81
G+ V+FP++PY Q +M +V+ L + + +LESPTGTGK+L LLC+TLAW+++
Sbjct: 8 GVTVDFPFKPYKCQQEYMAKVLECLQK-----KVNGILESPTGTGKTLCLLCTTLAWREH 62
Query: 82 CKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKK 141
+ IS K + + L G P+ S+ G A A +
Sbjct: 63 LR-----DTISARK-----IAERLQ--GELFPDRALSSW-----GSAAAAADGDPIACYT 105
Query: 142 MTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKEN 192
P I YASRTHSQ++QVISE + T+YR + VL SR+ C + V+ +E+
Sbjct: 106 DVPKIIYASRTHSQLTQVISELRNTSYRPKVCVLGSREQLCIHPEVKKQES 156
>gi|156102350|ref|XP_001616868.1| DNA repair helicase [Plasmodium vivax Sal-1]
gi|148805742|gb|EDL47141.1| DNA repair helicase, putative [Plasmodium vivax]
Length = 1103
Score = 217 bits (552), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 217/873 (24%), Positives = 368/873 (42%), Gaps = 206/873 (23%)
Query: 6 NPNPNYRKPLNAYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGT 65
N + N+R Y + ++V FPY+ Y Q +M V++ L R + +A+LESPTGT
Sbjct: 14 NEDVNHR-----YTINDVEVYFPYELYDCQYNYMLSVLNALKRKE-----NAILESPTGT 63
Query: 66 GKSLSLLCSTLAWQQNCKLK----NQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIP 121
GK+L LLC+++++ + K ++ NI+ +K + N G P+ +
Sbjct: 64 GKTLCLLCASISYLVDVLEKKGAFSENINITENKKNISFDFKENENSKG-----SPAKVA 118
Query: 122 PSTNGQTAQVAMNNKNVKKKMTPTIFYASRTHSQISQVISEYKKT-------AYRVPMAV 174
P ++ P I YASRTHSQ+ QVI E K Y++ +
Sbjct: 119 PPSD-----------------FPKIIYASRTHSQLKQVIKELKNVYFIKNNEKYKLLTTI 161
Query: 175 LASRKHYCTNK--YVRDKENIDEECKLLLGDRNLGCPQ---FKNVHKVRGHPSLQKGGCH 229
L SR C + Y ++ CK +N C K ++K++ H
Sbjct: 162 LGSRDQLCVHNINYNYKGTMLNNMCKR--TRKNGECMYHNGLKYLYKLK-HLFTTPMDVE 218
Query: 230 EVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILIL 289
+ +I +VGQ + C +YA R + ++ ++ PY+Y+ R ++++++ +I+I+
Sbjct: 219 TLSEIGKGNSVGQNIHFCPFYATREIQNECHVILLPYNYLFEESTRKILKLNLENSIIII 278
Query: 290 DEAHNIEDIARDAGSVDIDEDVLLKLQME-----LEQVCSVNPMIYQPLIEMTQD----- 339
DE HNIE++A +A S I D L L +E L + VN + + ++ D
Sbjct: 279 DEGHNIENVAEEAVSFKI-RDSELNLFLEGIKATLTVLDKVNDVDKETKDKINVDELFIL 337
Query: 340 ------LVGWIE-RRKATLAKREFQHFFSCWTGDKALRELQEANI-----SRQCFPILL- 386
L+ W++ R K + + + G + ++ NI + + F LL
Sbjct: 338 NRSITALIAWLDNERLEKNEKNKIKEKHKTYEGKQIFDIFEKNNINITKDNFENFHTLLS 397
Query: 387 ---ECATKAIKEATDTESELPHLSGMSVITLEGLFSSLTYFFS---RNGSHVSDYQLA-- 438
E + I + T+ ++ +++ + T++ + S + FS RN + +QL
Sbjct: 398 SMVELLNRYINDFKITQMDVKNINRY-ISTIDNVRKSFSILFSDIVRNC--IEYFQLYIN 454
Query: 439 ------------------LQKYIKRDSKNPGGNWTHTL----SLWCLNP-AVVFKDVAEL 475
++K+ K +K + +T+ SL C + A + + E
Sbjct: 455 EEKVSYSECGDVNKVYDNMKKFAKNKTKIVYDKYNYTMSKNISLLCFSATASLCGIIKEK 514
Query: 476 SLSIILTSGTLSPMNSFSSELG---VQFGTCLEAPHVID-----------VDLQVLTSVI 521
S+I+TSGTLSP+ FS +L F LE HVI + Q+L S
Sbjct: 515 VNSVIVTSGTLSPIEPFSKQLSGNYFSFKHILENDHVIKSHQLFVGCMTHYNNQILLSTY 574
Query: 522 ST-GPDNYPLNASYKTAD--------------GYKLMEKLCNRWRETGQWSRLNAKKPLF 566
DNY D Y M + N W++ + ++N+ K +F
Sbjct: 575 ENRSNDNYVKALGNCIFDIIICIPYGVLIFFSSYSSMTETVNAWKKFKIFEKINSYKTIF 634
Query: 567 VEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASF 626
VEP S+ + +L Y N +++KKR KGA
Sbjct: 635 VEPNKASE--LKDILDQYEN---------IIKKKR--------------------KGAIL 663
Query: 627 LAVCRGK---------------IVVGIPFPNINDIQVSLKKKYNDTYR------------ 659
+ VCRGK I+ G+P+ N+ D ++ KK++ D ++
Sbjct: 664 MGVCRGKISEGIDFKDDCCRGVIICGLPYGNVYDSKIIFKKEFLDNFKYENAASDMMGGA 723
Query: 660 ----------SSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNR 709
+ N+ GN+WY +A R++NQ+IGR IRH+ DYG+I LD RF +
Sbjct: 724 NGGGAQSNSTTLSNISKGNKWYNEEAMRSINQSIGRVIRHKNDYGSIFFLDSRFSNNQRI 783
Query: 710 AHISKWLRKSIKQYDSFDASLEGLKSFFRDVKG 742
ISKW+R + Y + + FF KG
Sbjct: 784 KEISKWVRTHFRIYRDIEQIQSDIDKFFELFKG 816
>gi|414886608|tpg|DAA62622.1| TPA: hypothetical protein ZEAMMB73_124196, partial [Zea mays]
Length = 203
Score = 216 bits (551), Expect = 5e-53, Method: Composition-based stats.
Identities = 109/194 (56%), Positives = 134/194 (69%), Gaps = 23/194 (11%)
Query: 18 YHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLA 77
Y VGG+ VEFPY+PYG+QL FM RVI+TLDRA+R G HALLESPTGTGKSLSLLCS LA
Sbjct: 32 YQVGGVPVEFPYKPYGTQLAFMGRVIATLDRARRQGRSHALLESPTGTGKSLSLLCSALA 91
Query: 78 WQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIP-ESQPSTIPPSTNGQTAQVAMNNK 136
WQ++ L++ A DPL +GGGF+P ++QP P + K
Sbjct: 92 WQRHYPLRSPPA------------PDPLLHGGGFVPDDTQPQPTP----------VVPEK 129
Query: 137 NVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE 196
VKKK P I+YA+RTH+QISQV+ EY+KT+YRV MA+LASRKHYC NK+ +NIDE+
Sbjct: 130 AVKKKNAPIIYYATRTHAQISQVVREYRKTSYRVRMAILASRKHYCVNKFACASDNIDEK 189
Query: 197 CKLLLGDRNLGCPQ 210
CK LL GCP+
Sbjct: 190 CKSLLDKTVQGCPE 203
>gi|378756742|gb|EHY66766.1| hypothetical protein NERG_00406 [Nematocida sp. 1 ERTm2]
Length = 690
Score = 216 bits (549), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 195/668 (29%), Positives = 297/668 (44%), Gaps = 97/668 (14%)
Query: 95 KPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQT-----AQVAMNNKNVKKKMTPTIFYA 149
+ E + L NG + ES P+ G+T A VA NKN +K I+
Sbjct: 22 RKSIETILTCLDNGESGMIES------PTGTGKTLSILEAVVAWVNKNPEKLEGGQIYVT 75
Query: 150 SRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEECKLLLGDRNLG-- 207
+RT Q SQ+I+ KK M +LASR+H C N V +ID CK D N
Sbjct: 76 TRTIKQASQLIAHLKKMKNAPMMNLLASRRHLCLNSEVSKSNDIDSACKKKNKDPNKDSR 135
Query: 208 CPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYS 267
C ++ ++ + + V IEDLV+ G C +Y R + A ++F PY+
Sbjct: 136 CKYYRTPNE-KEQERDRNISLPGVFSIEDLVSAGGECNSCPFYYTRERQEKATIIFSPYN 194
Query: 268 YIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQVCSV-N 326
YI++ I A+++D+ G++LI+DEAHNI+D+ R GSVDI L L L + +
Sbjct: 195 YIVSERISAALKIDLTGSVLIVDEAHNIDDVCRSTGSVDIKRADLASLISRLGTGSGMES 254
Query: 327 PMIYQPLIE---MTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRELQEANISRQCFP 383
P + ++E + ++ ++E L K + C RE+ +
Sbjct: 255 PEVANSMMETGKFVKKIMNYLEETTDVLNKLDPGQ---CVINSDNQREISIPS------- 304
Query: 384 ILLECATKAIKEATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQ--- 440
KE T ++ G+S +T++ FSS+ F +Q Q
Sbjct: 305 ----------KEMISTLEKM----GISKLTIDDTFSSIELLFKDMIPDDYFFQWITQIKD 350
Query: 441 --KYIKRDSKNPGGNWTHT--LSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSEL 496
KYI D +N G + +S L+ A +F + E + S+IL SGTL P +EL
Sbjct: 351 VLKYIMNDGENKYGMVVSSDKISFLLLHAAAIFNPIYEKARSVILLSGTLEPFQELVTEL 410
Query: 497 GVQ---FGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTADGYKLMEKLCNRWRET 553
+ F L A H+I Q+ T+ +S ++ P+ +Y+ + + L + +
Sbjct: 411 TTKKNSFKHFLSADHIISQS-QLYTAEVSQY-NSVPILGTYQGSKHPDYISTLVSSIVDI 468
Query: 554 GQ---------------------WSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGS 592
+L LFVE K S+ FE L+ Y G
Sbjct: 469 AHSLEKVGGVLCFVPSYNMLTLLERKLEKHVKLFVENKSNSK--FEYELEQYRRYCKMG- 525
Query: 593 KCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKK 652
KC + R K + ES R I+VGIP+PNI + V LKK
Sbjct: 526 KCIFLCVFRGKASEGINFRDHES---------------RAVILVGIPYPNIRNHSVILKK 570
Query: 653 KYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHI 712
+YND Y +S +G++WY QAFRA+NQA+GRCIRH+ D+G+I +LD R++ I
Sbjct: 571 QYNDRYLNS----TGSKWYEQQAFRAVNQALGRCIRHKNDWGSIFMLDSRYRSAVRSLKI 626
Query: 713 SKWLRKSI 720
SKW S+
Sbjct: 627 SKWAIASV 634
>gi|432092892|gb|ELK25255.1| Fanconi anemia group J protein [Myotis davidii]
Length = 1114
Score = 215 bits (547), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 122/314 (38%), Positives = 169/314 (53%), Gaps = 73/314 (23%)
Query: 468 VFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDN 527
F D+ +I+LTSGTLSPM SFSSELGV F LEA HVI+ + QV I +GP
Sbjct: 467 AFSDINGKVWTIVLTSGTLSPMKSFSSELGVTFTIQLEANHVIN-NSQVWVGTIGSGPKG 525
Query: 528 YPLNASYKTAD----------------------------GYKLMEKLCNRWRETGQWSRL 559
L A+++ + YKL+EKL RW TG W L
Sbjct: 526 RNLCATFQHTETFEFQDEVGALLLSVCQIVGQGILCFLPSYKLLEKLKERWLSTGLWHNL 585
Query: 560 NAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENA 619
K + VEP+GG + DF+ +L+ YY++I KC
Sbjct: 586 ELVKTVIVEPQGGEKTDFDELLQVYYDAI----KC-----------------------KG 618
Query: 620 NKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKKYNDTYRSSKNL 664
K GA +AVCRGK I +GIPFPN+ D+QV LK++YND + + L
Sbjct: 619 EKDGALLVAVCRGKVSEGLDFSDDNARAVITIGIPFPNVKDLQVELKRQYNDQHSKLRGL 678
Query: 665 LSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNR--AHISKWLRKSIKQ 722
L G +WY QA+RALNQA+GRCIRH+ D+GA+IL+D+RF+ +R + +SKW+R+ I+
Sbjct: 679 LPGRQWYEIQAYRALNQALGRCIRHKNDWGALILVDDRFRSNPSRYISGLSKWVRQQIQH 738
Query: 723 YDSFDASLEGLKSF 736
+ +F+++LE L F
Sbjct: 739 HSTFESALESLAEF 752
Score = 169 bits (427), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 100/313 (31%), Positives = 157/313 (50%), Gaps = 53/313 (16%)
Query: 125 NGQTAQVAMNNKNVKKKMTPTIFYASRTHSQISQVISEYKKTAY-RVPMAVLASRKHYCT 183
N Q A A + K P I++ +RTH QI+Q+ E ++TAY RVPM +L+SR H C
Sbjct: 154 NSQDASNATKKDHGGKSKIPKIYFGTRTHKQIAQITRELRRTAYSRVPMTILSSRDHTCV 213
Query: 184 NKYVRDKENIDEEC-KLLLGDRNLGCPQFKNVHKVRGHPSLQ--KGGCHEVHDIEDLVNV 240
+ V N +E+C +LL G C + VHK+ G + Q +G C + DIE+LV++
Sbjct: 214 HPEVVGNFNRNEKCMELLDGKNGKSCYFYHGVHKISGQHTFQTLQGMC-KAWDIEELVSL 272
Query: 241 GQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIAR 300
G+ ++ C YY AR + +DA ++FCPY+Y+++ IR +M++++K ++ILDEAHNIED AR
Sbjct: 273 GKKLKACPYYTARELIEDADIIFCPYNYLLDAQIRESMDINLKEQVVILDEAHNIEDCAR 332
Query: 301 DAGSVDIDE----------------DVLLKLQMELEQVCS--VNPMIYQPLIEMTQDL-- 340
++ S I E ++ K L+ VC +NP P ++T L
Sbjct: 333 ESASYSITEVQLRFARDELDSMVNNNIRKKDHEPLQAVCCSLINPDRLDPSSKLTYQLEH 392
Query: 341 ----------------------------VGWIERRKATLAKREFQHFFSCWTGDKALREL 372
GW+E L +R+++ W+G + L
Sbjct: 393 LPLLVSEHHSHWSTSRLSAPWWSVHIKASGWLEANSEHLVERDYESSCKIWSGSEMLLNF 452
Query: 373 QEANISRQCFPIL 385
+ I+ FPIL
Sbjct: 453 HKMGITTATFPIL 465
>gi|320169108|gb|EFW46007.1| hypothetical protein CAOG_03975 [Capsaspora owczarzaki ATCC 30864]
Length = 1452
Score = 214 bits (546), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 124/367 (33%), Positives = 179/367 (48%), Gaps = 86/367 (23%)
Query: 454 WTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVD 513
W+ +L+ WCLNP V F+ +++ + S+ILTSGTLSPM SF+SEL +F +E H +D
Sbjct: 682 WSFSLNFWCLNPGVGFRSLSK-ARSVILTSGTLSPMTSFASELQTEFAVRMEGKHQVDPS 740
Query: 514 LQVLTSVISTGPDNYPLNASYKTAD----------------------------GYKLMEK 545
Q+ + GP L+ YK+A+ Y L+EK
Sbjct: 741 -QLWVGAVGVGPSGTELSGVYKSAETFSYQDEVGQLVLRVCRTVPHGVLCFFPSYSLLEK 799
Query: 546 LCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCA---------- 595
+ RWR+TG W +L A+K +FVEPK + FE +++ Y + I +G +
Sbjct: 800 MTLRWRDTGVWQQLAAQKTMFVEPKSADKAAFEEMMQRYQSVIERGKSQSPAGAHGNKSG 859
Query: 596 ----------------------VVRKKRVKREGNNDLNT-------IESQENANKKGASF 626
+++K V + L T ++ GA
Sbjct: 860 SSASSGASASTKPPRSAFTSFFTLQQKAVAGSRTSKLGTQKKGAANADTSSPTTGNGALL 919
Query: 627 LAVCRGKI---------------VVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSGNEWY 671
L VCRGKI +V IPFPN D QV LK+ +ND R + LL+G +WY
Sbjct: 920 LGVCRGKISEGIDFADDQARAVIIVSIPFPNYTDPQVELKRLHND-QRVKQGLLAGKDWY 978
Query: 672 CNQAFRALNQAIGRCIRHRFDYGAIILLDERFQE-ERNRAHISKWLRKSIKQYDSFDASL 730
QAFRA+NQA+GRCIRH+ D+GAII D+RF +R +S W+R ++K Y FD +
Sbjct: 979 EIQAFRAVNQAVGRCIRHKADWGAIIFADQRFSANDRLHGSLSSWVRHNLKTYKQFDPMM 1038
Query: 731 EGLKSFF 737
+ L SF
Sbjct: 1039 QSLASFM 1045
Score = 151 bits (382), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/316 (32%), Positives = 159/316 (50%), Gaps = 53/316 (16%)
Query: 97 DTEAVTD---PLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKKMTPTIFYASRTH 153
DT+ V D P +G G++ + +PP + T +V PTIFY +RTH
Sbjct: 243 DTDMVHDESVPPDSGAGYM-----TGMPPPSTPDTNRV------------PTIFYGTRTH 285
Query: 154 SQISQVISEYKKTA-YRVPMAVLASRKHYCTNKYVRDKENIDEECKLLLGDRNLGCPQFK 212
QISQ++ E +++ V M VLASR C + V +E CK + + C +
Sbjct: 286 KQISQMVRELRRSGQTNVTMCVLASRDKTCIHSKVAASSQKNELCKSAIETHD--CRYYH 343
Query: 213 NVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINP 272
NV + H + V DIEDLV +G+ R C Y+AAR M +A +VFCPY+Y+++P
Sbjct: 344 NVKTLTRHSDFRANQRLAVWDIEDLVELGKKTRSCPYFAAREMVGEANIVFCPYNYLVDP 403
Query: 273 VIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQME---LEQVCSVN-PM 328
VIR M ++IK +I+ILDEAHNIED+AR++ S+ + + L+ + E L +CS
Sbjct: 404 VIRKQMGLNIKDSIIILDEAHNIEDVARESMSLTVSLEELVDAENETGSLRLMCSPGCRE 463
Query: 329 IYQPLIEMTQDLVGWIERRKATLAKR--------------------------EFQHFFSC 362
+ ++ M D G ++R ATL + F+ S
Sbjct: 464 SFGDVVAMDTDDGGPAQQRLATLERSYSQLNDFLSRLNAWLLLQTNSLTEAVAFEKAQSR 523
Query: 363 WTGDKALRELQEANIS 378
W+G +A+ L++A ++
Sbjct: 524 WSGMQAVAVLEQAGVT 539
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 45/60 (75%), Gaps = 5/60 (8%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+GG++V FP+QPY +Q+ M VI +++ Q +AL+ES TGTGKSL++LC++L+WQ
Sbjct: 11 IGGVRVTFPFQPYPAQIAMMSSVIRAVEKRQ-----NALIESATGTGKSLAMLCASLSWQ 65
>gi|389585879|dbj|GAB68609.1| DNA repair helicase, partial [Plasmodium cynomolgi strain B]
Length = 1101
Score = 213 bits (542), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 213/871 (24%), Positives = 370/871 (42%), Gaps = 202/871 (23%)
Query: 6 NPNPNYRKPLNAYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGT 65
N + N+R Y + ++V FPY+ Y Q +M V++ L + + +A+LESPTGT
Sbjct: 14 NEDVNHR-----YTINDVEVYFPYELYDCQYNYMLSVLNALKKKE-----NAILESPTGT 63
Query: 66 GKSLSLLCSTLAWQQNCKLK----NQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIP 121
GK+L LLC+++++ + K ++ NI+ +K + N G P+ +
Sbjct: 64 GKTLCLLCASISYLVDVMEKKGAFSENINITENKKNISFDFKENENSKG-----SPAKVA 118
Query: 122 PSTNGQTAQVAMNNKNVKKKMTPTIFYASRTHSQISQVISEYKKT-------AYRVPMAV 174
P ++ P I YASRTHSQ+ QVI E K Y++ +
Sbjct: 119 PPSD-----------------FPKIIYASRTHSQLKQVIKELKNVYFIKNNEKYKLLTTI 161
Query: 175 LASRKHYCTNK--YVRDKENIDEECKLLLGDRNLGCPQ---FKNVHKVRGHPSLQKGGCH 229
L SR C + Y ++ CK +N C K ++K++ H
Sbjct: 162 LGSRDQLCVHNINYNYKGTMLNNMCKR--TRKNGECMYHNGLKYLYKLK-HLFTTPMDVE 218
Query: 230 EVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILIL 289
+ +I +VGQ + C +YA R + ++ ++ PY+Y+ R ++++++ +I+I+
Sbjct: 219 TLSEIGKGNSVGQNIHFCPFYATREIQNECHVILLPYNYLFEESTRKILKLNLENSIIII 278
Query: 290 DEAHNIEDIARDAGSVDIDEDVLLKLQME-----LEQVCSVNPMIYQPLIEMTQD----- 339
DE HNIE +A +A S I D L L +E L + VN + + ++ D
Sbjct: 279 DEGHNIETVAEEAVSFKI-RDSELNLFLEGIKATLTVLDKVNDVDKETKDKVNVDQLFIL 337
Query: 340 ------LVGWIE-RRKATLAKREFQHFFSCWTGDKALRELQEANI-----SRQCFPILL- 386
L+ W++ R K + + + G + ++ NI + + F LL
Sbjct: 338 NRSITALISWLDNERLEKNEKNKVKEKHKTYEGKQIFDIFEKNNINITKDNFENFHTLLS 397
Query: 387 ---ECATKAIKEATDTESELPHLSGMSVITLEGLFSSLTYFFS---RN-----GSHVSDY 435
E + I + ++ ++ +++ + T++ + S + FS RN ++++
Sbjct: 398 SMVELLNRYINDFKISQMDVKNITKY-ISTIDNIRKSFSILFSDIVRNCIEYFQLYINEE 456
Query: 436 QLA-------------LQKYIKRDSKNPGGNWTHTL----SLWCLNP-AVVFKDVAELSL 477
++A ++K+ K +K + +T+ SL C + A + + E
Sbjct: 457 KVAYSECGDVNKVYDNMKKFAKNKTKIVYDKYNYTMSKNISLLCFSATASLCGIIKEKVN 516
Query: 478 SIILTSGTLSPMNSFSSELG---VQFGTCLEAPHVID-----------VDLQVLTSVIST 523
S+I+TSGTLSP+ FS +L F LE HVI + Q+L S
Sbjct: 517 SVIVTSGTLSPIEPFSKQLSGNYFSFKHILENDHVIKSHQLFVGCMTHYNNQILLSTYEN 576
Query: 524 -GPDNYPLNASYKTAD--------------GYKLMEKLCNRWRETGQWSRLNAKKPLFVE 568
DNY D Y M + N W++ + ++N+ K +FVE
Sbjct: 577 RSNDNYMKALGNCIFDLIICIPYGVLIFFSSYSSMTETVNAWKKFKIFEKINSYKTIFVE 636
Query: 569 PKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLA 628
P ++ + +L Y N +++KKR KGA +
Sbjct: 637 PNKAAE--LKDILDQYEN---------IIKKKR--------------------KGAILMG 665
Query: 629 VCRGK---------------IVVGIPFPNINDIQVSLKKKYNDTYR-------------- 659
VCRGK I+ G+P+ N+ D ++ KK++ D ++
Sbjct: 666 VCRGKISEGIDFKDDCCRGVIICGLPYGNVYDSKIIFKKEFLDNFKYESSGNDMIGGANG 725
Query: 660 --------SSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAH 711
+ N+ GN+WY +A R++NQ+IGR IRH+ DYG+I LD RF +
Sbjct: 726 GGVQSNNTTLSNISKGNKWYNEEAMRSINQSIGRVIRHKNDYGSIFFLDSRFSNNQRIKE 785
Query: 712 ISKWLRKSIKQYDSFDASLEGLKSFFRDVKG 742
ISKW+R + Y + + FF KG
Sbjct: 786 ISKWVRTHFRIYRDIEQIQSDIDKFFELFKG 816
>gi|302847399|ref|XP_002955234.1| hypothetical protein VOLCADRAFT_96085 [Volvox carteri f.
nagariensis]
gi|300259526|gb|EFJ43753.1| hypothetical protein VOLCADRAFT_96085 [Volvox carteri f.
nagariensis]
Length = 1606
Score = 213 bits (541), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 114/309 (36%), Positives = 165/309 (53%), Gaps = 76/309 (24%)
Query: 457 TLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQV 516
+L LWCLNPAV F+ +A+ + S++LTSGTL+P++SF+SELG +F LEAPHV+D+ QV
Sbjct: 698 SLGLWCLNPAVAFRSLADKAHSVVLTSGTLAPLDSFASELGTEFHFRLEAPHVVDMSRQV 757
Query: 517 LTSVISTGPDNYPLNASYKTAD----------------------------GYKLMEKLCN 548
V+ GP L+A+Y+ + Y L+++L +
Sbjct: 758 WAGVVPRGPGGSLLSATYRESGTLAFQDDAGEAVLRYCQVIPGGVLLFMPSYSLLDRLMS 817
Query: 549 RWRE-TGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGN 607
RW+ TG WSRL A K + VEP+ + FE + YY + S+G A
Sbjct: 818 RWQSSTGLWSRLEAVKTVVVEPREAGR-GFEEAMSSYYGAASEGIDFAD----------- 865
Query: 608 NDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSG 667
RG I++GIPFP I D +K LL+G
Sbjct: 866 --------------------GFARGVILLGIPFPAIKD---------------TKRLLTG 890
Query: 668 NEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFD 727
+ WY QAFRALNQA+GRCIRH++D+GAIILLDERF+ + +S+W+R ++K ++ F+
Sbjct: 891 DAWYNQQAFRALNQAVGRCIRHKYDWGAIILLDERFRGSGRQQQLSRWVRTAVKVHEDFN 950
Query: 728 ASLEGLKSF 736
S+ L +F
Sbjct: 951 TSITELDAF 959
Score = 187 bits (475), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 96/255 (37%), Positives = 149/255 (58%), Gaps = 17/255 (6%)
Query: 134 NNKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENI 193
+ +V+ P IF+A+RTHSQI+QV+ E K++ Y+ MA+LA+++HYC NK VR +
Sbjct: 190 DEDDVQDFKPPKIFFATRTHSQIAQVVRELKRSGYKPTMAILAAKQHYCINKKVRRTGRV 249
Query: 194 DEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHE---VHDIEDLVNVGQVVRG--CS 248
DEEC LL + GC + RG + + G +HDIE+L R C+
Sbjct: 250 DEECDKLLKESEYGC-------RYRGKAAGRAGRTPPEIGLHDIEELAAKCSNGRNPTCA 302
Query: 249 YYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDID 308
Y+ AR +A A LVFCPY+Y+++P++R A+ +D+ GA+LI DEAHN+ED+ R+ GS+D+D
Sbjct: 303 YFVARDLALTADLVFCPYTYLLDPLVRAALGIDVGGAVLIFDEAHNMEDVCREGGSMDLD 362
Query: 309 EDVLLKLQMELEQVCSVN--PMIYQPLIEMTQDL---VGWIERRKATLAKREFQHFFSCW 363
DVL ++++ + P +Y PL E+ L +G E A + F+ + +
Sbjct: 363 LDVLREVEVSFRLAAQLTSRPELYSPLAEVVGRLGAVLGRYEASSAGMTACGFEQHEAVF 422
Query: 364 TGDKALRELQEANIS 378
G +AL L EA +
Sbjct: 423 QGPRALNMLSEAGLG 437
Score = 42.4 bits (98), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/28 (67%), Positives = 22/28 (78%)
Query: 56 HALLESPTGTGKSLSLLCSTLAWQQNCK 83
+ALLE PTG GK+LSLLC+ LAWQ K
Sbjct: 13 NALLEMPTGCGKTLSLLCAALAWQTQRK 40
>gi|294887329|ref|XP_002772055.1| regulator of telomere elongation helicase 1 rtel1, putative
[Perkinsus marinus ATCC 50983]
gi|239875993|gb|EER03871.1| regulator of telomere elongation helicase 1 rtel1, putative
[Perkinsus marinus ATCC 50983]
Length = 946
Score = 204 bits (518), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 219/793 (27%), Positives = 347/793 (43%), Gaps = 132/793 (16%)
Query: 39 MCRVISTLDRAQRD-------GHCHALLESPTGTGKSLSLLCSTLAWQQNC---KLKNQL 88
M +VI TL A D +ALLESPTGTGK+L LLC+TLAW+++ K+ +
Sbjct: 1 MTKVIETLQAAYSDPPKTGSPAVHNALLESPTGTGKTLCLLCATLAWRRSLTEDKIPSSS 60
Query: 89 ANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKK------- 141
++ + + E V PL + I P + V + + ++
Sbjct: 61 SSANAASLPIEDV--PLETQPEIAHAVEFGIIGPRWRSKQLIVEEHQRQSRRSPSPPSRK 118
Query: 142 ---MTPTIFYASRTHSQISQVISEYKKTAYR--VPMAVLASRKHYCTNKYVRDKENIDEE 196
P I Y+SRTHSQ+ QV+ E + T+Y LASR+HYC N + + +
Sbjct: 119 SPVAVPKIVYSSRTHSQLRQVMRELRSTSYAKDCQHITLASREHYCVNTRISAIQGSRKT 178
Query: 197 CK---LLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAAR 253
L+L + CP + + ++ PS+ D+E+L + + C +Y AR
Sbjct: 179 AACTSLILKN---ACPYYNRMWQMNETPSMIP---PPALDVEELTSHARGKGYCPFYYAR 232
Query: 254 SMADDAQLVFC---PYSYIIN-PVIRGAMEVD-IKGAILILDEAHNIEDIARDAGSVDID 308
+A + + C PY+Y+ + ++GA+ ++GAI+I+DE HNIE + ++ S +
Sbjct: 233 KVAREGSNLGCMLVPYNYLFDLSALKGALGPQALEGAIVIVDEGHNIEAVCEESASFEWG 292
Query: 309 EDVLLKLQMELEQV---CSVNPMIYQPLIEMTQD---------------LVGWIERRKAT 350
+ E+++ C+ +P I +E D L + +AT
Sbjct: 293 NFDIFAAVEEVDEAAYRCNNSPKILGLNVEHAPDDSPSAAPVTEDDLLLLKEDLMSLEAT 352
Query: 351 LAKREFQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMS 410
L + + G L ++A I+ Q + AI T E G S
Sbjct: 353 LTSAD---IVTATEGSAVLDFFKQAGITDQTVTRIRSTLEGAISLFHTTAPE-ADAGGHS 408
Query: 411 VITLEGLFSSLTYF--FSR--NGSHVSDYQLALQKYIKRDSK-NPGGNWTHTLSLWCLNP 465
G SS + F R + +D +L L K +R S N G + C +
Sbjct: 409 NNNTLGAASSGAFLGSFLRIIDLVFANDIEL-LDKASRRTSVLNRNGRFR------CFSG 461
Query: 466 AVVFKDV--AELSLSIILTSGTLSPMNSFSSEL-GVQFGTCLEAPHVIDVDLQVLTSVIS 522
V + + +E LS+I+TSGTL+P+ F L GV F LE H+I + +I
Sbjct: 462 GVAARKLLASEGILSLIVTSGTLAPLTEFKRGLRGVDFPIMLENDHII-----IWGGIIC 516
Query: 523 TGPDNYPLNASYKTADGYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEI--- 579
GP N LN S++ + + +++L N V PK G
Sbjct: 517 AGPTNVKLNGSFRARNSHDYLQELGNVLAN--------------VAPKAGDGVLVAFSSY 562
Query: 580 ----VLKHYYNSISQGSKCAVVRKKRVKREGNN--DLNTIESQENA-----NKKGASFLA 628
K +++S ++ R R+ E N+ L + ++ A + GA A
Sbjct: 563 AQLRTAKDFWDSHDITNRFQ-QRGLRIFEEPNDATRLRPVLAEYTAAIASNSCNGAILCA 621
Query: 629 VCRGKI---------------VVGIPFPNINDIQVSLKKKYNDTYRSSKNLLS------G 667
VCRGK+ VVGIP+P D +V LK +Y DT R +++ G
Sbjct: 622 VCRGKVCEGVDLTDRQCRIVMVVGIPYPMFKDERVQLKMQYLDTARDIEDIQKGAHAPLG 681
Query: 668 NEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFD 727
WY +A RA+NQA+GR IRH+ D+GA++L DERFQ E +R + WLR +K Y +F
Sbjct: 682 RAWYSLEAMRAVNQAVGRIIRHKNDFGAVLLCDERFQSEAHR--LPAWLRPYVKTYQAFG 739
Query: 728 ASLEGLKSFFRDV 740
++ L FF +
Sbjct: 740 PAIGSLTQFFNQI 752
>gi|348682926|gb|EGZ22742.1| hypothetical protein PHYSODRAFT_330481 [Phytophthora sojae]
Length = 873
Score = 203 bits (516), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 126/349 (36%), Positives = 180/349 (51%), Gaps = 58/349 (16%)
Query: 434 DYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFS 493
D++L + K ++ + KN T TL +WCL+ AVVF +A + S+IL SGTLSPM+SF+
Sbjct: 483 DFKLLITKKMRINDKNEEVIDT-TLCIWCLSAAVVFSSLALQAHSVILASGTLSPMDSFA 541
Query: 494 SELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTAD--------------- 538
ELGV F LE+ HV+++ QV I GP N L ++YK
Sbjct: 542 GELGVDFPIRLESNHVVNMRKQVFIGAIMNGPGNVDLISTYKNQQKFQYQDSMGFLLLQY 601
Query: 539 -------------GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYY 585
Y LM L RW+ TG W +L K +F EP+ G +E F+ +L Y
Sbjct: 602 AQVIPGGILMFFPSYALMHILKARWQRTGIWDQLGKHKRMFWEPRLGGKE-FDALLIQYK 660
Query: 586 NSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKI----------- 634
I++ S V + E + GA FLAV R K+
Sbjct: 661 TVIAEHSVSHSTPSGWV------------NSEEPTQTGAIFLAVYRDKVSEGIDFSDDNA 708
Query: 635 ----VVGIPFPNINDIQVSLKKKYND-TYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRH 689
VGIPFPN D+QVSL+++Y D R ++ L++G+ WY QAFRALNQA+GRCIRH
Sbjct: 709 RAVLAVGIPFPNFKDLQVSLRREYQDHKSRVNRKLVNGSWWYKLQAFRALNQALGRCIRH 768
Query: 690 RFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
R DYGA+IL++ R + + +SKW+R ++++ S + FF+
Sbjct: 769 RRDYGAVILIESRHRGNSHGNSLSKWMRPHVQEFYSSEDCNPLFAEFFQ 817
Score = 84.7 bits (208), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 57/83 (68%)
Query: 230 EVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILIL 289
+V DIED+ C+Y+ ++S ++A +VFCPY+Y+++P IR A+ +++ AI++L
Sbjct: 322 QVWDIEDITKEASTCDECAYFFSKSALEEAHIVFCPYNYVLDPAIRKAVGINLHNAIVVL 381
Query: 290 DEAHNIEDIARDAGSVDIDEDVL 312
DEAHN+ED R S+++ E +L
Sbjct: 382 DEAHNVEDTCRSGASLELTEHML 404
>gi|325180138|emb|CCA14540.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 911
Score = 202 bits (515), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 159/567 (28%), Positives = 252/567 (44%), Gaps = 130/567 (22%)
Query: 255 MADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDID-EDV-- 311
M A ++F PY+Y+ +P+ R ++ + I+ AILI DEAHN+E +A DA S ED+
Sbjct: 1 MLQHADIIFVPYNYLTDPIARTSLGISIENAILIFDEAHNVESVASDAFSYSFSCEDISA 60
Query: 312 ---------------LLKLQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREF 356
+ L E + M+ L+E+ + L + L KR
Sbjct: 61 CVSEIQHFVFAVETKRILLSSETQINIESAEMLKALLLEIGKALAEFSLSPSGGLTKR-- 118
Query: 357 QHFFSCWTGDKALRELQEANISRQCFPILLECATKAI----KEATDTESELPHLSGMSVI 412
G+ + N++ + P+++ + I ++ + S M +
Sbjct: 119 --------GEYIFEFFKRFNVTFKTCPLVISTIEEIIELTQRQGGEESSHRNSRLDMFMT 170
Query: 413 TLEGLFSSLTYFFSRNGSHVS-DYQLALQKYIKRDSKNP---------GGNWTHTLSLWC 462
L +F S + +S Y++ +Q+ +R + P G T + WC
Sbjct: 171 FLNTVFRS-----EKEAQAISRHYRVHIQETKQRRANTPKLFNSFGNNTGKMTRVFNYWC 225
Query: 463 LNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVI 521
+P + F+D+ ++ +IILTSGTLSP+ + ELG++F LE HVID Q V+
Sbjct: 226 FHPGLTFQDIRSKNVYNIILTSGTLSPLKTTIRELGIEFPIQLENKHVIDAS-QAWVGVL 284
Query: 522 STGPDNYPLNASYK---------------------TADG-------YKLMEKLCNRWRET 553
S G LN+SY T +G Y ++E + W+++
Sbjct: 285 SKGVTGKRLNSSYNYRSTPEYLSELGNTIVNFVRATPNGILVFFPSYTILEDSISFWQKS 344
Query: 554 --GQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLN 611
W R+ K +FVEP+ ++ +F +++ Y+ SI +VK+EG
Sbjct: 345 PCTIWIRIAKLKEVFVEPR--NRTEFNVIVDEYHQSI------------KVKQEG----- 385
Query: 612 TIESQENANKKGASFLAVCRGKI---------------VVGIPFPNINDIQVSLKKKYND 656
A F AVCRG++ + G+PFP D ++ LKK D
Sbjct: 386 ------------AVFFAVCRGRVSEGIDFANEKGRAVVITGLPFPPTKDPKIILKKGILD 433
Query: 657 TYRSSKN-----LLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAH 711
++N L+GN+WY QA RA+NQAIGR IRHR DYGAIIL DERF + +
Sbjct: 434 EATVAENETASCKLTGNQWYIQQASRAVNQAIGRVIRHRHDYGAIILCDERFGLSQQQKC 493
Query: 712 ISKWLRKSIKQYDSFDASLEGLKSFFR 738
+SKWL+ Y S+ + L FF+
Sbjct: 494 LSKWLQPFCYGYKSYGDAHISLMRFFK 520
>gi|358341159|dbj|GAA28295.2| regulator of telomere elongation helicase 1 [Clonorchis sinensis]
Length = 1325
Score = 202 bits (514), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 162/568 (28%), Positives = 252/568 (44%), Gaps = 95/568 (16%)
Query: 231 VHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILD 290
V DIEDLV +G+ C YY +R DA+++F PY+Y+++P IR ++++ +I D
Sbjct: 148 VVDIEDLVKLGKSTGCCPYYMSRESKTDAEIIFTPYNYLLDPKIRKLYNIELQNTAVIFD 207
Query: 291 EAHNIEDIARDAGSVDIDEDVLLKL-------QMELEQVCSVNPMIYQPLIEMTQDLVGW 343
EAHNI R + S+ + +L K E E +C+ ++ Q M +
Sbjct: 208 EAHNI---VRSSWSM-LYAYILSKTPGYASRTTAEYECICTYKCLVQQYFYMMHCSSI-- 261
Query: 344 IERRKATLAKREFQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESEL 403
I L+ W E+ E + IL+ C + D+++
Sbjct: 262 ITAPAVPLS-------VDSWNLSTFWNEVSEF---LKVISILVHCIADLFQVVFDSKNVS 311
Query: 404 PHLSGMSVITLEGL-FSSLTYFFSRNGSHVSDYQLALQKYIKRD----SKNPGGNWT--- 455
PH + S++ L G+ +S F++ D QLA + + D S+ G N
Sbjct: 312 PHSNIFSLLRLPGVDYSHCYRVFAK------DEQLANRGRVTADRVWDSRGVGSNQPVTD 365
Query: 456 HTLSLWCLNPAVVFKD-VAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDL 514
TLS WCL+P +D + E +ILTSGTL P+ SEL + F L+ PHVI +
Sbjct: 366 RTLSYWCLSPGRAMQDLIKERVRCVILTSGTLYPIEPIQSELHMNFPISLQNPHVIKPE- 424
Query: 515 QVLTSVISTGPDNYPLNASYKTAD----------------------------GYKLMEKL 546
QV +VI+ G D LN+SY T D Y +M +
Sbjct: 425 QVRLAVITRGKDGIALNSSYATRDKPEYRTSLGLTLVEIIQIVPAGLLVFFTSYGMMSQC 484
Query: 547 CNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREG 606
+ W+ + ++ K +FVEP+ Q F V Y + S C V G
Sbjct: 485 VDAWKNEQLYDKMLRYKRIFVEPRDKVQ--FAKVFSDYRDVASGAVPCDV--------NG 534
Query: 607 NNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYNDTYRSSKN--- 663
+ + + A F RG +V+G+P+P +D +V LK Y D + N
Sbjct: 535 AALFAVMRGRASEGLDLADFAG--RGVVVLGLPYPPFHDARVRLKMSYLDEQLAELNNQA 592
Query: 664 -------------LLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRA 710
+G +WY QA+RA+NQ+IGR IRH D+GAI L DERF + R+
Sbjct: 593 SKSGSDAKAFVASHPTGKKWYNQQAWRAVNQSIGRVIRHHRDFGAIFLCDERFAQVSARS 652
Query: 711 HISKWLRKSIKQYDSFDASLEGLKSFFR 738
W++ S++ Y + A+LE +F++
Sbjct: 653 QFPHWMQPSMRVYTNLRAALEETSTFYK 680
>gi|74217142|dbj|BAC34798.2| unnamed protein product [Mus musculus]
Length = 577
Score = 200 bits (508), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 107/331 (32%), Positives = 183/331 (55%), Gaps = 22/331 (6%)
Query: 144 PTIFYASRTHSQISQVISEYKKTAYR-VPMAVLASRKHYCTNKYVRDKENIDEEC-KLLL 201
P I++ +RTH QI+Q+ E +KTAY VPM +L+SR H C + V N E+C +LL
Sbjct: 247 PKIYFGTRTHKQIAQITRELRKTAYSGVPMTILSSRDHSCVHPEVVGNFNRKEKCMELLD 306
Query: 202 GDRNLGCPQFKNVHKVRGHPSLQK-GGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQ 260
G C + VHK+ +LQ G DIE+LV++G+ ++ C YY AR + +DA
Sbjct: 307 GKHGKSCYFYHGVHKISNQQTLQHLQGMSRAWDIEELVSLGRKLKACPYYTARELIEDAD 366
Query: 261 LVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELE 320
+VFCPY+Y+++ IR M++ +KG ++ILDEAHNIED AR++ S + E L + EL+
Sbjct: 367 IVFCPYNYLLDSQIRETMDIKLKGQVVILDEAHNIEDCARESASYSVTEVQLRFARDELD 426
Query: 321 QVC--SVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRELQEANIS 378
+ ++ ++PL ++ +L+ W+E L +R ++ W+G++ L L I+
Sbjct: 427 SLINGNIRKKSHEPLRDVCYNLINWLETNSKHLVERGYESSCKIWSGNEMLLNLYRMGIT 486
Query: 379 RQCFPILLECATKAIKE--------ATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGS 430
FP+L + +++ + ++P +S + + L+GLF L Y F N
Sbjct: 487 TATFPVLQRHLSAVLQKEEKVTPIHGKEEAIQIPIISASTQVVLKGLFMVLDYLFRENSR 546
Query: 431 HVSDYQLALQKYIKRDSKNPGGNWTHTLSLW 461
DY++A+Q+ +WT+ ++++
Sbjct: 547 FADDYKVAIQQTY---------SWTNQIAIF 568
Score = 72.8 bits (177), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 47/67 (70%), Gaps = 5/67 (7%)
Query: 15 LNAYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCS 74
L+ Y +GG+++ FP + Y +QL M ++ L+ +Q H LLESPTG+GKSL+LLCS
Sbjct: 5 LSDYTIGGVKIHFPCRAYPAQLAMMNSIVRGLNSSQ-----HCLLESPTGSGKSLALLCS 59
Query: 75 TLAWQQN 81
LAWQQ+
Sbjct: 60 ALAWQQS 66
>gi|307176988|gb|EFN66294.1| Regulator of telomere elongation helicase 1 [Camponotus floridanus]
Length = 978
Score = 199 bits (506), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 120/347 (34%), Positives = 177/347 (51%), Gaps = 84/347 (24%)
Query: 440 QKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGV 498
+K IK D K +S WC +P + + E + S+ILTSGTLSP+ F SELG+
Sbjct: 441 KKTIKTDGK--------LISYWCFSPGFGMEQMVEQGIRSVILTSGTLSPLKPFISELGI 492
Query: 499 QFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTAD-------------------- 538
LE PH++ QV V+S GPDN+PLN+SY T +
Sbjct: 493 PIAVQLENPHIV-TKQQVCVGVLSQGPDNHPLNSSYNTRNDPKYIASLGRTVYNFSCIIP 551
Query: 539 --------GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQ 590
Y +M+K + W+ G W+++ +KP++VEP S++ F V+ YY I
Sbjct: 552 HGLLIFFPSYPIMKKCRDEWQNMGLWTQIAERKPIYVEP--NSKDGFVNVMNEYYQKI-- 607
Query: 591 GSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKI---------------V 635
R+ +N KGA F+AVCRGK+ +
Sbjct: 608 -------------RDPSN-------------KGAVFMAVCRGKVSEGLDFANANGRAVLI 641
Query: 636 VGIPFPNINDIQVSLKKKYNDTYRSS-KNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYG 694
+G+PFP + D +V LK++Y + R++ K L+G EWY +A RA+NQAIGR IRH+ DYG
Sbjct: 642 IGLPFPPLKDPRVMLKQRYLEEIRTAEKESLTGQEWYQLEASRAVNQAIGRIIRHKSDYG 701
Query: 695 AIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFRDVK 741
A+IL D RF+ + +S WLR IK++ +F + L+ FFR+ +
Sbjct: 702 AVILCDCRFENPNFKKQLSAWLRPYIKKFTNFGMITKELREFFRNAE 748
Score = 141 bits (355), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 107/299 (35%), Positives = 157/299 (52%), Gaps = 43/299 (14%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ I V FP++PY Q +M +VI L Q H +LESPTGTGK+LSLLCS+L+W
Sbjct: 6 INDIIVSFPFKPYSVQEEYMRKVIECLQNGQ-----HGVLESPTGTGKTLSLLCSSLSWL 60
Query: 80 --QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPE-----SQPSTIPPSTNGQTAQVA 132
+ +L+ Q+ + K D GG F + S +P N Q+ A
Sbjct: 61 LTKKAQLQAQVIAGAIEKKDF---------GGHFFKYLVDGLEKASGVP--DNVQSFGWA 109
Query: 133 MNNKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYR-VPMAVLASRKHYCTNKYVRDKE 191
M P I YASRTHSQ+SQ + E KKT+Y+ V AVL SR C + V +
Sbjct: 110 M----------PKIIYASRTHSQLSQAMYELKKTSYKHVATAVLGSRDQLCIHPEVSKEA 159
Query: 192 ---NIDEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCS 248
N C + R C + NV + P ++ EV DIEDLV +GQ + C
Sbjct: 160 SAFNKIHMCHSKVKSRT--CFYYNNVEARKDDPVFKQ----EVLDIEDLVKIGQKHKCCP 213
Query: 249 YYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDI 307
Y+ A+ + +A +VF PY+Y+++P R + +D++ +++LDEAHN+E + +A S+ I
Sbjct: 214 YFLAKELKQNADIVFMPYNYLLDPKTRKSQGIDLQNTVVLLDEAHNVEKVCEEAASLQI 272
>gi|301097939|ref|XP_002898063.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262105424|gb|EEY63476.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 622
Score = 198 bits (504), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 163/546 (29%), Positives = 247/546 (45%), Gaps = 117/546 (21%)
Query: 144 PTIFYASRTHSQISQVISEYKK--TAYR--VPMA------VLASRKHYCTNKYVRDKEN- 192
P IF+ SRTHSQ++Q ++E K +Y +P + VLA ++ C N+ V +
Sbjct: 136 PKIFFCSRTHSQLTQAVNELKDCPASYMRAIPGSTELRSCVLAVKRLLCVNEDVNSEPML 195
Query: 193 IDEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCH--------------EVHDIEDLV 238
++E+C+ L + K ++ G +GGC +V DIED+
Sbjct: 196 VNEKCQELRME--------KERRRMAGDEE-GEGGCKYNQTSFSELRAQSPQVWDIEDIT 246
Query: 239 NVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDI 298
+ C+Y+ ++S + A +VFCPY+YI++P IR A+ + + +I++LDEAHN+ED
Sbjct: 247 KLASTCEECAYFFSKSKLETAHIVFCPYNYILDPAIRKAVGITLHNSIVVLDEAHNVEDT 306
Query: 299 ARDAGSVDIDEDVLLKLQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQH 358
R S++I +++L + + V +QP A A R
Sbjct: 307 CRSGASLEITDNMLGRAIKSFDDVIWQGDEGFQP---------------PAYDAVRRMLS 351
Query: 359 FFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVITLEGLF 418
W EL E +K AT + L LS ++ T L
Sbjct: 352 SVETWFAVN--EELHEQ-----------------LKLATPGKKVL--LSNSALNTATRLI 390
Query: 419 SSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHT-LSLWCLNPAVVFKDVAELSL 477
S TY FS N + D++L + K ++ + + G T L +WCL+ AVVF +VA S
Sbjct: 391 SVATYMFSDNCKNADDFKLLITKKMRVNDE--GEEIIDTKLCIWCLSAAVVFAEVARNSH 448
Query: 478 SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTA 537
S+IL SGTLSPMNSF+ ELGV F LEA HV+++ QV + GP L ++YK
Sbjct: 449 SVILASGTLSPMNSFAGELGVDFPIRLEANHVVNMRKQVFVGALMNGPGGVDLLSTYKNQ 508
Query: 538 D----------------------------GYKLMEKLCNRWRETGQWSRLNAKKPLFVEP 569
Y L+ L RW TG W++L K +F EP
Sbjct: 509 QNFQYQDSMGYLLLQYAQMIPGGILMFFPSYALLGILKARWERTGIWAKLVKHKKMFSEP 568
Query: 570 KGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKK--GASFL 627
+ G + F+ +L Y NSI+ + + D + +NA + GA FL
Sbjct: 569 RQGGKF-FDELLDKYKNSIA-------------RHAASQDAPSGWMNDNAEPRETGAIFL 614
Query: 628 AVCRGK 633
AV RGK
Sbjct: 615 AVYRGK 620
>gi|348688344|gb|EGZ28158.1| hypothetical protein PHYSODRAFT_470654 [Phytophthora sojae]
Length = 826
Score = 198 bits (504), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 214/874 (24%), Positives = 350/874 (40%), Gaps = 217/874 (24%)
Query: 22 GIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW--- 78
G FPY+PY QL M ++ TL+R GHC + ESPTGTGKS+SL+C L W
Sbjct: 3 GAFFSFPYEPYSIQLDLMRQIWETLER----GHC-GIFESPTGTGKSISLICGALTWLTK 57
Query: 79 --------------QQNCKLKNQ-----LANISHSKPDTEAVTDPLANG---------GG 110
Q K + Q LA I + + EA T G
Sbjct: 58 HTDDWLSDFEQKTADQEVKFRQQMAKEALAGIEKLRLEPEATTKKRKMAIAYNYTDRKRG 117
Query: 111 FIPESQPSTIPPSTNGQTAQV----AMNNKNVKKKMTPT--------------------- 145
S S+ +G A A ++ V++ T +
Sbjct: 118 RQSNSTSSSRERKQDGDDADEHLVDAYDSDRVRRGSTDSDEESAVTRGRFGEEKPDFGVV 177
Query: 146 -IFYASRTHSQISQVISEYKKTAY--RVPMAVLASRKHYCTN----KYVRDKENIDEECK 198
I Y SRTHSQISQ + E +KTA+ R+ + L SRK+ CTN K D D+
Sbjct: 178 KIIYCSRTHSQISQFVREIRKTAFAERIRVVSLGSRKNLCTNPNVTKLTSDLRMTDKCLD 237
Query: 199 LLL------GDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAA 252
++ G + CP ++ ++ GH + V DIEDL +G+ + CSYY
Sbjct: 238 MMQSGKTKNGKKVGKCPFYEK--ELLGH--YKDYALAHVQDIEDLHTLGEDMSICSYYGT 293
Query: 253 RSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVL 312
R AQ+V PYS +++ R + + ++ I+I DEAHNI D + V+I L
Sbjct: 294 RESIPLAQIVTVPYSLLLSKDARETLGLGLENNIVIFDEAHNIIDAINNTYKVEITSKQL 353
Query: 313 LKLQMEL--------EQVCSVNPMIYQPLIEMTQDLVGWIER------RKATLAKRE--- 355
+ + L ++ N + L+ + + L ++ + + A++ E
Sbjct: 354 VVARRSLWSYFTRYEKRFKGKNAFYIKQLLSIMESLTKFLRQLSKSAGKAASVGDDEDGA 413
Query: 356 ------------FQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEA------- 396
F + K L L E+ ++++ + T A
Sbjct: 414 TGAQMMTINDFLFSARIDHFNMFKILEYLSESGLAKKLVGFVDSTGTSGSSAAPPPQNAT 473
Query: 397 --TDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNW 454
+D E H+S + T+E L +LT + D ++ Q N
Sbjct: 474 DDSDEGFESRHISPLR--TVEALLKALT-------AAGGDGRILTQ------PNNASKGV 518
Query: 455 THTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSEL-------GVQFGTCLEAP 507
+ LNP + F+++ + S S+IL GT+ P++ +L V +C
Sbjct: 519 EGLVRFILLNPVIHFQEIVKKSRSVILAGGTMQPVSQVIDQLFSSVPRESVDLFSC---G 575
Query: 508 HVIDVDLQVLTSVISTGPDNYPLNASY-KTAD---------------------------G 539
HVI + +L +++GP L +Y + D
Sbjct: 576 HVIPPE-NLLGFSLASGPSQKHLEFTYSRRGDMEALDELGRILFNLSRIVPGGVVVFFPS 634
Query: 540 YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRK 599
Y+ + RW+ T Q+ ++ AKK +F EPK S E E+++++ + C
Sbjct: 635 YRFEDNAVRRWQTTKQYEQIQAKKAIFREPK-KSDELAEVLMQY-------SAAC----- 681
Query: 600 KRVKREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNIN 644
SQ+N + GA L+V GK ++VG+P+PN
Sbjct: 682 ---------------SQDNRDGSGAMLLSVVGGKMSEGINFSDELARCVVMVGMPYPNAR 726
Query: 645 DIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQ 704
D ++ K + D ++ SG ++Y + +A+NQ+IG IRH+ DY I+L+D R+
Sbjct: 727 DAELVEKMAFLD----KRSPGSGRQFYASLCMKAVNQSIGTSIRHQKDYSTILLVDHRYS 782
Query: 705 EERNRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
R+ + +W++K + SF L F+R
Sbjct: 783 SSAVRSRLPEWIQKRVHPPTSFGQVYSQLVQFYR 816
>gi|410055438|ref|XP_003953847.1| PREDICTED: regulator of telomere elongation helicase 1 [Pan
troglodytes]
Length = 997
Score = 197 bits (500), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 163/567 (28%), Positives = 243/567 (42%), Gaps = 134/567 (23%)
Query: 265 PYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDE----------DVLLK 314
PY+Y+++ R A +D+KG ++I DEAHN+E + ++ S D+ D +L+
Sbjct: 2 PYNYLLDAKSRRAHNIDLKGTVVIFDEAHNVEKMCEESASFDLTPHDLASGLDVIDQVLE 61
Query: 315 LQMELEQVCSVNPMIY----QPLIEMTQDLVGWIE----RRKATLAKREFQHFFSCWT-- 364
Q + Q +P P + M + + ++ R + + E S T
Sbjct: 62 EQTKAAQQGEPHPEFSTDSPSPGLNMELEDIAKLKMILLRLEGAIDAVELPGDDSGVTKP 121
Query: 365 GDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVI-----TLEGLFS 419
G EA I+ Q +L+ + I+ HL+G + + L+ L
Sbjct: 122 GSYIFELFAEAQITFQTKGCILDSLDQIIQ----------HLAGRAGVFTNTAGLQKLAD 171
Query: 420 SLTYFFSRN---GSHVSDYQL-ALQKYI--------KRDSKNPGGNWTHT--------LS 459
+ FS + GS S L ALQ Y R + W+ T LS
Sbjct: 172 IIQIVFSVDPSEGSPGSPAGLGALQSYKVHIHPDAGHRRTAQRSDAWSTTAARKRGKVLS 231
Query: 460 LWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLT 518
WC +P +++ + S+ILTSGTL+P++SF+ E+ + F CLE PH+ID Q+
Sbjct: 232 YWCFSPGHSMRELLRQGVRSLILTSGTLAPVSSFALEMQIPFPVCLENPHIIDKH-QIWV 290
Query: 519 SVISTGPDNYPLNASYKTA----------------------------DGYKLMEKLCNRW 550
V+ GPD L++++ Y +MEK W
Sbjct: 291 GVVPRGPDGAQLSSAFDRRFSEECLSSLGKALGNIARVVPYGLLIFFPSYPVMEKSLEFW 350
Query: 551 RETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDL 610
R ++ A KPLFVEP+ S+ F + YY RV G+
Sbjct: 351 RARDLARKMEALKPLFVEPR--SKGGFSETISAYY--------------ARVAAPGST-- 392
Query: 611 NTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKKYN 655
GA+FLAVCRGK IV G+P+P D +V LK ++
Sbjct: 393 ------------GATFLAVCRGKASEGLDFSDTNGRGVIVTGLPYPPRMDPRVVLKMQFL 440
Query: 656 DTYR----SSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAH 711
D + + LSG EWY QA RA+NQAIGR IRHR DYGA+ L D RF RA
Sbjct: 441 DEMKGQGGAGGQFLSGQEWYRQQASRAVNQAIGRVIRHRQDYGAVFLCDHRFAFADARAQ 500
Query: 712 ISKWLRKSIKQYDSFDASLEGLKSFFR 738
+ W+R ++ YD+F + + FFR
Sbjct: 501 LPSWVRPHVRVYDNFGHVIRDVAQFFR 527
>gi|194388328|dbj|BAG65548.1| unnamed protein product [Homo sapiens]
Length = 996
Score = 196 bits (499), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 163/567 (28%), Positives = 242/567 (42%), Gaps = 134/567 (23%)
Query: 265 PYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDE----------DVLLK 314
PY+Y+++ R A +D+KG ++I DEAHN+E + ++ S D+ D +L+
Sbjct: 2 PYNYLLDAKSRRAHNIDLKGTVVIFDEAHNVEKMCEESASFDLTPHDLASGLDVIDQVLE 61
Query: 315 LQMELEQVCSVNPMIY----QPLIEMTQDLVGWIE----RRKATLAKREFQHFFSCWT-- 364
Q + Q +P P + M + + ++ R + + E S T
Sbjct: 62 EQTKAAQQGEPHPEFSADSPSPGLNMELEDIAKLKMILLRLEGAIDAVELPGDDSGVTKP 121
Query: 365 GDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVI-----TLEGLFS 419
G EA I+ Q +L+ + I+ HL+G + + L+ L
Sbjct: 122 GSYIFELFAEAQITFQTKGCILDSLDQIIQ----------HLAGRAGVFTNTAGLQKLAD 171
Query: 420 SLTYFFSRN---GSHVSDYQL-ALQKYI--------KRDSKNPGGNWTHT--------LS 459
+ FS + GS S L ALQ Y R + W+ T LS
Sbjct: 172 IIQIVFSVDPSEGSPGSPAGLGALQSYKVHIHPDAGHRRTAQRSDAWSTTAARKRGKVLS 231
Query: 460 LWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLT 518
WC +P ++ + S+ILTSGTL+P++SF+ E+ + F CLE PH+ID Q+
Sbjct: 232 YWCFSPGHSMHELVRQGVRSLILTSGTLAPVSSFALEMQIPFPVCLENPHIIDKH-QIWV 290
Query: 519 SVISTGPDNYPLNASYKTA----------------------------DGYKLMEKLCNRW 550
V+ GPD L++++ Y +MEK W
Sbjct: 291 GVVPRGPDGAQLSSAFDRRFSEECLSSLGKALGNIARVVPYGLLIFFPSYPVMEKSLEFW 350
Query: 551 RETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDL 610
R ++ A KPLFVEP+ S+ F + YY RV G+
Sbjct: 351 RARDLARKMEALKPLFVEPR--SKGSFSETISAYY--------------ARVAAPGST-- 392
Query: 611 NTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKKYN 655
GA+FLAVCRGK IV G+P+P D +V LK ++
Sbjct: 393 ------------GATFLAVCRGKASEGLDFSDTNGRGVIVTGLPYPPRMDPRVVLKMQFL 440
Query: 656 DTYR----SSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAH 711
D + + LSG EWY QA RA+NQAIGR IRHR DYGA+ L D RF RA
Sbjct: 441 DEMKGQGGAGGQFLSGQEWYRQQASRAVNQAIGRVIRHRQDYGAVFLCDHRFAFADARAQ 500
Query: 712 ISKWLRKSIKQYDSFDASLEGLKSFFR 738
+ W+R ++ YD+F + + FFR
Sbjct: 501 LPSWVRPHVRVYDNFGHVIRDVAQFFR 527
>gi|387594391|gb|EIJ89415.1| hypothetical protein NEQG_00185 [Nematocida parisii ERTm3]
gi|387596770|gb|EIJ94391.1| hypothetical protein NEPG_01059 [Nematocida parisii ERTm1]
Length = 689
Score = 196 bits (498), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 190/645 (29%), Positives = 289/645 (44%), Gaps = 111/645 (17%)
Query: 122 PSTNGQT-----AQVAMNNKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVP-MAVL 175
P+ G+T + VA NKN K+ ++ +RT Q Q+I EY KT P M++L
Sbjct: 43 PTGTGKTLSILESVVAWINKN-KQNKEVKVYVTTRTIKQAQQLI-EYFKTIRHAPKMSLL 100
Query: 176 ASRKHYCTNKYVRDKENIDEECKLLLGDRNLGCP-QFKNVHKVRGHPSLQKGGCHEVHDI 234
ASR H C N VR N+D CK D N ++ ++ K S + V I
Sbjct: 101 ASRAHLCLNPEVRTAGNLDSACKNKNKDINSKNKCKYYSIDK-ESRTSSMENSLPTVFSI 159
Query: 235 EDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHN 294
EDL+ G C YY + M D + +VF PY+YIIN I AM +D+ G+I+I+DEAHN
Sbjct: 160 EDLIQSGSECSTCPYYYTKDMQDKSTIVFAPYNYIINKSIVKAMGIDLNGSIIIVDEAHN 219
Query: 295 IEDIARDAGSVDID----EDVLLKLQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKAT 350
++DI R +GSVDI+ + +L KL E +VN I P + ++ I
Sbjct: 220 LDDICRSSGSVDIERIILDGILTKLTTE-----TVNASIEVPEVFTCISIIKGI------ 268
Query: 351 LAKREF----QHFFSCWTGDKALREL---QEANISRQCFPILLECATKAIK-EATDT--- 399
RE+ S D + ++ QE +I ++C IL E + I E+ D
Sbjct: 269 ---REYFDGVPDLLSEVPQDMKIYDVNGKQELSIPQKC--ILSELSKLGITPESVDKVFS 323
Query: 400 -------ESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGG 452
S L ++ LE +F + +G DY + + +
Sbjct: 324 DINGLIRNSVLDEFMERWLVQLETVFKLIL----SDGKQ-RDYGMVISE----------- 367
Query: 453 NWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGT---CLEAPHV 509
+S L AV F + +++ S+IL SGTL P +EL G+ L A HV
Sbjct: 368 ---DKVSFILLRAAVQFDPIYKMARSVILLSGTLQPFPELVNELTYNSGSFKYFLSAGHV 424
Query: 510 IDVDLQVLTSVISTGPDNYPLNASYKTADG-------YKLMEKLCNRWRETG-------- 554
I D Q+ T + + + L +YK +++ + + G
Sbjct: 425 IS-DSQLYTRTVGQ-YNGHTLTGTYKETKNPVYFQTISRVITDIAHSLERVGGVLCFVPN 482
Query: 555 --QWSRLNAK--KPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDL 610
+ L +K K L + + FE L+ Y + G KC + R K +
Sbjct: 483 YNTITLLKSKLEKQLLLYTESTDNGIFEDNLRKYRSKCLNG-KCVFLCVFRGKASEGINF 541
Query: 611 NTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSGNEW 670
ES R ++VGIP+PNI + + LKK+YN+ Y + SG++W
Sbjct: 542 KDHES---------------RAVVLVGIPYPNIRNHGIILKKQYNNQYMNG----SGSKW 582
Query: 671 YCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKW 715
Y QAFRA+NQA+GRCIRH+ D+G+I ++D R+ + IS+W
Sbjct: 583 YDQQAFRAVNQALGRCIRHKNDWGSIFMIDSRYGSAVKSSKISEW 627
>gi|307197478|gb|EFN78712.1| Regulator of telomere elongation helicase 1 [Harpegnathos saltator]
Length = 963
Score = 194 bits (494), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 112/326 (34%), Positives = 168/326 (51%), Gaps = 76/326 (23%)
Query: 458 LSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQV 516
+S WC +P + + E + S++LTSGTLSP+ F SELG+ LE PH++ + QV
Sbjct: 450 ISYWCFSPGFGMQQMVEQGVRSVVLTSGTLSPLKPFISELGIPIAVQLENPHIVTKE-QV 508
Query: 517 LTSVISTGPDNYPLNASYKTAD----------------------------GYKLMEKLCN 548
V+S GPDN+PLN+SY T + Y +M K +
Sbjct: 509 CVGVLSQGPDNHPLNSSYNTRNDPKYIASLGRTLYNFSCIVPHGLLIFFPSYPIMRKCRD 568
Query: 549 RWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNN 608
W+ G W++++ +KP++VEP S++ F V+ YY I + C
Sbjct: 569 EWQNMGLWTQISERKPIYVEP--NSKDGFVNVMNEYYQKI-KDPLC-------------- 611
Query: 609 DLNTIESQENANKKGASFLAVCRGKI---------------VVGIPFPNINDIQVSLKKK 653
KGA F+AVCRGK+ ++G+PFP + D +V LK++
Sbjct: 612 -------------KGAIFMAVCRGKVSEGLDFANANGRAVLIIGLPFPPLKDPRVMLKQR 658
Query: 654 YNDTYRSS-KNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHI 712
Y + R++ K L+G EWY +A RA+NQAIGR IRH+ DYGA+IL D RF+ + +
Sbjct: 659 YLEEIRTTEKQGLTGQEWYQLEASRAVNQAIGRIIRHKNDYGAVILCDCRFENPNFKKQL 718
Query: 713 SKWLRKSIKQYDSFDASLEGLKSFFR 738
S WLR IK++ +F + L+ FF+
Sbjct: 719 SAWLRPYIKKFTNFGIITKELREFFK 744
Score = 149 bits (376), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 109/294 (37%), Positives = 156/294 (53%), Gaps = 35/294 (11%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ I V FP++PY Q +M +VI L Q H +LESPTGTGK+LSLLCS+L+W
Sbjct: 6 INDIIVSFPFKPYSVQEEYMRKVIECLQNGQ-----HGVLESPTGTGKTLSLLCSSLSWL 60
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNG--QTAQVAMNNKN 137
K + Q I+ K D GG F T+G + A V N +N
Sbjct: 61 LAKKAQLQAQVIAIEKKDL---------GGNFFKHL--------TSGLEKAAGVPDNPQN 103
Query: 138 VKKKMTPTIFYASRTHSQISQVISEYKKTAYR-VPMAVLASRKHYCTNKYVRDKE---NI 193
M P I YASRTHSQ+SQ + E K+T+Y+ +P AVL SR C + V + N
Sbjct: 104 FGWAM-PKIIYASRTHSQLSQAMHELKRTSYKHIPTAVLGSRDQLCIHPEVSKEPTTFNK 162
Query: 194 DEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAAR 253
C + R C F NV + P+ ++ EV DIEDLV GQ + C Y+ A+
Sbjct: 163 IHMCHSKVKSRT--CFYFNNVEARKDDPTFRQ----EVLDIEDLVKAGQKHKCCPYFLAK 216
Query: 254 SMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDI 307
+ A +VF PY+Y+++P R + +D++ +++LDEAHN+E + +A S+ I
Sbjct: 217 ELKQSADIVFMPYNYLLDPKTRKSQGIDLQNTVVLLDEAHNVEKVCEEAASLQI 270
>gi|340715420|ref|XP_003396211.1| PREDICTED: LOW QUALITY PROTEIN: regulator of telomere elongation
helicase 1 homolog [Bombus terrestris]
Length = 996
Score = 194 bits (493), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 117/331 (35%), Positives = 165/331 (49%), Gaps = 76/331 (22%)
Query: 453 NWTHTLSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVID 511
N +S WC +P + + + + SIILTSGTLSP+ F SELG+ LE PH++
Sbjct: 448 NEGKVISYWCFSPGFSMQQLMDQGVRSIILTSGTLSPLKPFISELGIPIELQLENPHIVK 507
Query: 512 VDLQVLTSVISTGPDNYPLNASYKTAD----------------------------GYKLM 543
D Q+ V+S GPD Y LN+S+ T + Y +M
Sbjct: 508 GD-QICVGVLSQGPDGYSLNSSFNTRNDPKYIASLGRTVLNFSCIIPYGLLVFFPSYPIM 566
Query: 544 EKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVK 603
+K W+ TG W+++ +KP++VEP+ ++ F V+ YY I S C
Sbjct: 567 KKCKEEWQTTGLWTKIADRKPIYVEPQ--YRDGFINVMNEYYEKIKDPS-C--------- 614
Query: 604 REGNNDLNTIESQENANKKGASFLAVCRGKI---------------VVGIPFPNINDIQV 648
KGA F+AVCRGK+ + G+PFP + D +V
Sbjct: 615 ------------------KGAIFMAVCRGKVSEGLDFANANGRAVLITGLPFPPLKDPRV 656
Query: 649 SLKKKY-NDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEER 707
LK++Y + + +K LSG +WY +A RA+NQAIGR IRH+ DYGAIIL D RF
Sbjct: 657 ILKQRYLEEMKKQNKEALSGQQWYQLEASRAVNQAIGRIIRHKNDYGAIILCDCRFDNPN 716
Query: 708 NRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
+ H+S WLR IK + SF ++ LK FFR
Sbjct: 717 FKKHLSAWLRPHIKNFTSFGIIMKELKDFFR 747
Score = 134 bits (336), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 103/295 (34%), Positives = 152/295 (51%), Gaps = 35/295 (11%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ + V FP++PY Q +M +VI L + + +LESPTGTGK+LSLLCS+L+W
Sbjct: 6 INNVIVNFPFKPYSIQEEYMVKVIECLQNGK-----NGVLESPTGTGKTLSLLCSSLSWL 60
Query: 80 QNCKLKNQLANI--SHSKPDTEA-VTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNK 136
K + Q ++ + KPD L+NG + E + P S G
Sbjct: 61 LTKKAQLQAQSLIGAIEKPDFGGHFFKQLSNG---LKEGTGDSEPTSNLGWAP------- 110
Query: 137 NVKKKMTPTIFYASRTHSQISQVISEYKKTAYR-VPMAVLASRKHYCTNKYVRDKENIDE 195
P I YASRTHSQ+SQ + E K+T+Y+ V AVL SR C + V + +
Sbjct: 111 -------PKIIYASRTHSQLSQAMQELKRTSYKHVSTAVLGSRDQLCIHPEVSKETSSSN 163
Query: 196 E---CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAA 252
+ C + R C + NV + P ++ EV DIEDLV VGQ + C Y+ +
Sbjct: 164 KIYMCHSKIKSRT--CFYYNNVESRKDDPLFKQ----EVLDIEDLVKVGQKFKCCPYFLS 217
Query: 253 RSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDI 307
R + +A + F PY+Y+++ R +DI+ I++LDEAHNIE +A S+ I
Sbjct: 218 RELKQNADITFMPYNYLLDSKSRKTQGIDIQNNIILLDEAHNIEKTCEEAASLQI 272
>gi|164657658|ref|XP_001729955.1| hypothetical protein MGL_2941 [Malassezia globosa CBS 7966]
gi|159103849|gb|EDP42741.1| hypothetical protein MGL_2941 [Malassezia globosa CBS 7966]
Length = 891
Score = 193 bits (490), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 178/710 (25%), Positives = 317/710 (44%), Gaps = 120/710 (16%)
Query: 109 GGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKKMTPTIFYASRTHSQISQVISEYKKTAY 168
GG PE+ P T P IFYASRTHSQ++Q+I+E K+T +
Sbjct: 222 GGMAPENTPET-----------------------RPKIFYASRTHSQLAQLINEVKRTPF 258
Query: 169 ---RVPM--AVLASRKHYCTNKYVR------DKENIDEEC-KLLLGDRNLGCPQFKNVHK 216
R P+ L SRKH C + VR + ++E C +L+ + CP F H
Sbjct: 259 GKAREPVRSISLGSRKHMCLHADVRRVGATSGTDAMNERCLELIQNKKGQRCP-FLPPHD 317
Query: 217 VRGHPSLQKGGCH---EVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPV 273
G ++ + H +VHDIE+LV +G+ +R C Y+ R A +A+LV PY+ ++
Sbjct: 318 AMGQVTMDRYRDHALAQVHDIEELVQLGKDLRICPYFGTRHSARNAELVTLPYNLLLQHD 377
Query: 274 IRGAMEVDIKGAILILDEAHNIEDI-----ARDAGSVDIDE-----DVLL-KLQMELEQV 322
R A+++ ++ +IL++DEAHN+ D + IDE DV L + L+ V
Sbjct: 378 AREALQLSLEESILLIDEAHNLIDTILATYTTELTQAHIDEATAQVDVYLQRFSKRLKGV 437
Query: 323 CSVNPMIYQPLIEMTQDLVGWIERRKATLAKRE----FQHFFSCWTGD-------KALRE 371
+ I Q ++ Q I + K + +R+ F + G + R
Sbjct: 438 NEEHIRILQVILHAMQSFCAEICKNKQHMWQRDTSLTLPAFMAHLGGSVDQINLVRLERW 497
Query: 372 LQEANISRQCFPI---LLECATKAIKEATDTESELPHLSGMSVITLEGLFSSLTYFFSRN 428
L++ I+R+ + E A + +T + P ++ +LE +L S N
Sbjct: 498 LKDTRIARKIGGYANKVWERAQTSENPSTWRPATRPSCMTRAMHSLEAFLLALCN-RSMN 556
Query: 429 GSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSP 488
G + + A+ D+ GG L L+P F+ + + +I+LT GT+ P
Sbjct: 557 GCILVSNERAISGGRGTDNTVSGGVRFKYL---LLHPGDAFEPLVADARAIVLTGGTMEP 613
Query: 489 MNSFSSELGVQFG----TCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTADGYKLME 544
++ F ++L + H++ D VL +V+ GP + L +++ L++
Sbjct: 614 ISDFRTQLFSNLPDERLSLFSCGHIVPRD-HVLGAVVPVGPKGHTLEFTHEAWQRPCLLD 672
Query: 545 KLCN----------------------------RWRETGQWSRLNAKKPLFVEPKGGSQED 576
+L N +WR+TG RL+ +K +F+EPK +D
Sbjct: 673 ELGNVLSNYSNIVPHGMVVFFPSYASLDMTVAQWRKTGMLDRLSKRKQVFMEPKDA--KD 730
Query: 577 FEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVV 636
+ +L+ Y +++S + +G L + ++ + LA C ++V
Sbjct: 731 VDTILRQYASTVSTPPPTSP--------KGAMLLAVVGAKLSEGINFQDELARC--VVMV 780
Query: 637 GIPFPNINDIQVSLKKKYNDT-----YRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRF 691
G+PFP+ +++ + + + RSS + G + Y N RA+NQ++GR IRH
Sbjct: 781 GLPFPHSQSPELAERLAFARSTQPPDTRSSTD--PGRDLYVNMCMRAVNQSMGRAIRHSA 838
Query: 692 DYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFRDVK 741
DY ++LD+R+ + + W+R ++ ++ F +S++ + FF+ K
Sbjct: 839 DYAVFLMLDQRYGRDSILMRLPGWIRTQVQVHERFGSSIKAVAQFFQQRK 888
Score = 45.8 bits (107), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 48/104 (46%), Gaps = 12/104 (11%)
Query: 7 PNPNYRKPLNAYHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGT 65
P P +P + FPY Y QL M + T+++ + + ESPTGT
Sbjct: 11 PVPGSSEPQSDDAARSRAFHFPYPTAYRIQLDLMSALFDTIEQGK-----AGVFESPTGT 65
Query: 66 GKSLSLLCSTLAWQQNCKLKNQLANISHSKPDTEAVTDPLANGG 109
GK+LSLLCS L W + N+ +I + TE T A GG
Sbjct: 66 GKTLSLLCSALTWLE----MNRQRHILGVRASTE--TKETATGG 103
>gi|328853665|gb|EGG02802.1| hypothetical protein MELLADRAFT_38383 [Melampsora larici-populina
98AG31]
Length = 791
Score = 192 bits (489), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 178/679 (26%), Positives = 297/679 (43%), Gaps = 108/679 (15%)
Query: 121 PPSTNGQTAQVAMNNKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVP--MAVLASR 178
P GQ + N + +I++ SRTHSQ+SQ +SE +KT++ + + L SR
Sbjct: 148 PEDDEGQEDTIGPNG------LPRSIYFTSRTHSQLSQFVSELRKTSFGLGTRLIALGSR 201
Query: 179 KHYCTNKYVRDK----ENIDEECKLLLGDRNLGC-PQFKNVHKVRGHPSLQKGGCHEVHD 233
+ C N+ V+ K E ++E C D G P N+ R EV D
Sbjct: 202 SNLCVNEEVKKKAKSLEALNEACT----DLQKGVLPNDLNLSYARQS---------EVRD 248
Query: 234 IEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAH 293
IE+L ++G+ C YY AR AQ+V PY+ ++ R A+ + + ++I+DEAH
Sbjct: 249 IEELASLGKERGVCPYYGARKALRQAQIVTLPYNLLLQKSSRNALGISLTDNVIIVDEAH 308
Query: 294 NIEDIARDAGSVDIDEDVL--------LKLQMELEQVCSVNPMIYQPLIEMTQDLVGWIE 345
N+ D S I + L + ++ +++ N + Q L+ + + L + +
Sbjct: 309 NLIDNVLAIHSTSISSNFLELVKNSFKIYIKKFEKKLKGSNLVHLQQLVRVFECLGNYCD 368
Query: 346 RRKATLAKREFQHFFSCWTGDKA----------LRELQEANISRQCFPILLECATKAIKE 395
L K +H T + +L+E + + ATK
Sbjct: 369 ELAKALPKNLGKHEEIITTNSLLQKTGVLDLLNMHDLEEYLNESKIINKISGYATKVETV 428
Query: 396 ATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWT 455
+T+S+ S + G + ++ + + + L+ + D K
Sbjct: 429 MNNTDSDDKAFKTRSTF-VTGFYRIQSFMLALSNAEKDGRVLSSSERSSTDEKK----VV 483
Query: 456 HTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFG--TCLE--APHVID 511
TL LNP+ F+DVA + S+IL GT++P++ F ++L G LE H++
Sbjct: 484 VTLRYQLLNPSETFRDVASEARSVILAGGTMAPISDFRTQLFPYLGPDQFLEFACAHIVP 543
Query: 512 VDLQVLTSVISTGPDNYPLNASYKT---------------------ADG-------YKLM 543
+ +L V+ GP PL + + DG Y ++
Sbjct: 544 QE-NLLVRVVPHGPSKTPLELKFASRGDNKLLDDLGQSISNICNVVKDGIVCFFPSYAIL 602
Query: 544 EKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQ------GSKCAVV 597
+ L +RW+ +G SRL +K +F EPK S D E LK Y ++I+ G+ V
Sbjct: 603 DSLRDRWKTSGLLSRLENRKKVFNEPK--SSADVETTLKDYASAITSPTLPQTGALLFAV 660
Query: 598 RKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYNDT 657
++ EG N N + CR IV+GIP+PN N I++ + KY +T
Sbjct: 661 VGGKLS-EGINFSNEL----------------CRAVIVIGIPYPNANSIELKERIKYAET 703
Query: 658 YRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLR 717
K +G Y N AF+A+NQ+IG+ IRH D+ +IILLD R+ E ++ + W+
Sbjct: 704 LSGGKRE-AGAALYSNMAFKAVNQSIGQSIRHANDWSSIILLDSRYGTENSQKKLPGWIN 762
Query: 718 KSIKQYDSFDASLEGLKSF 736
S++ D+F ++ L F
Sbjct: 763 SSLQISDNFGKLVKDLAQF 781
Score = 43.1 bits (100), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/25 (68%), Positives = 20/25 (80%)
Query: 54 HCHALLESPTGTGKSLSLLCSTLAW 78
H + ESPTGTGKSLS++CSTL W
Sbjct: 19 HKVGIFESPTGTGKSLSIICSTLTW 43
>gi|345325239|ref|XP_001508332.2| PREDICTED: regulator of telomere elongation helicase 1
[Ornithorhynchus anatinus]
Length = 1585
Score = 192 bits (487), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 155/572 (27%), Positives = 258/572 (45%), Gaps = 109/572 (19%)
Query: 22 GIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQN 81
G+ V+FP+QPY Q +M +V+ L + + +LESPTGTGK+L LLC+TLAW+++
Sbjct: 8 GVTVDFPFQPYKCQEDYMAKVLECLQK-----KVNGILESPTGTGKTLCLLCTTLAWREH 62
Query: 82 CKLKNQLANISHSKPDTEAVTD-PLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKK 140
+ I+ E + P+++ G +T+G T +
Sbjct: 63 FRDTISARKIAERMNGEELFPNRPMSSWGTA-----------ATDGDTTAYYTD------ 105
Query: 141 KMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE---C 197
P I YASRTHSQ++QVI E + T YR + VL SR+ C N V+ +E+ + C
Sbjct: 106 --VPKIIYASRTHSQLTQVIGELRSTTYRPKVCVLGSREQLCINPEVKKQESNHMQIHMC 163
Query: 198 KLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMAD 257
+ + + C + NV + S +K + DIEDLV G + C YY +RS+
Sbjct: 164 RKKVATHS--CYFYNNVEEK----STEKELITSILDIEDLVKSGSKHKVCPYYFSRSLKQ 217
Query: 258 DAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARD-----------AGSVD 306
A ++F PY+Y+++ R A +D+KG ++I DEAHN+E + + A +D
Sbjct: 218 QADIIFMPYNYLLDSKSRRAHNIDLKGTVVIFDEAHNVEKMCEESASFDLTPYDLASGLD 277
Query: 307 IDEDVLLK----------------------LQMELEQVCSVNPMIYQ-----PLIEMTQD 339
+ VL + L MELE + + ++ Q IE+ D
Sbjct: 278 VINQVLEEQAKVLQQNEIQAEFNMEFANSGLNMELEDIAKIKSILLQLESAIDAIELPGD 337
Query: 340 LVGWIERRKATLAKREFQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDT 399
G + + F + +A I+ Q LLE + I+
Sbjct: 338 SSG---------VTKPGSYIFDLFA---------KAQINFQTKCSLLESLEQIIQFLAGR 379
Query: 400 ESELPHLSGMS--VITLEGLFS------SLTYFFSRNGSHVSDYQLALQKYIKRDSKNPG 451
+ +G+ V ++ +FS + ++ + S + L ++ ++
Sbjct: 380 AGIFTNTAGLQKLVDIIQIVFSIDPPEDAASFMVGQKASQYYKVHIHLDTSNRKKTQRTD 439
Query: 452 GNWT--------HTLSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGT 502
W+ LS WC +P ++ + +IILTSGTL+P++SF+ E+ + F
Sbjct: 440 A-WSAPVTKKQGKVLSYWCFSPGYSMHELVRQGVRTIILTSGTLAPISSFTMEMQIPFPV 498
Query: 503 CLEAPHVIDVDLQVLTSVISTGPDNYPLNASY 534
LE PHVID Q+ ++ GPD L+++Y
Sbjct: 499 SLENPHVIDKH-QIWVGIVPKGPDGAQLSSAY 529
>gi|301629712|ref|XP_002943978.1| PREDICTED: regulator of telomere elongation helicase 1-like
[Xenopus (Silurana) tropicalis]
Length = 688
Score = 191 bits (485), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 125/373 (33%), Positives = 175/373 (46%), Gaps = 94/373 (25%)
Query: 429 GSHVSDYQLALQKYIK-------RDSKNPGGN-WTHT-------LSLWCLNPAVVFKDVA 473
G++VS + + KY K K P G+ W+++ LS WC +P D+
Sbjct: 6 GANVSSFNQNISKYYKVHIHPDTNQRKKPRGDVWSNSKKQGGKVLSYWCFSPGYTMHDLV 65
Query: 474 ELSLS-IILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNA 532
+ +ILTSGTL P++SF+ E+ + F LE PHVID Q+ ++ GPD L++
Sbjct: 66 RQGVRCVILTSGTLCPLSSFTMEMQIPFPVSLENPHVIDKH-QIWVGIVPRGPDGSQLSS 124
Query: 533 SY-------------KTAD---------------GYKLMEKLCNRWRETGQWSRLNAKKP 564
SY KT Y +++K W+E G ++++ KP
Sbjct: 125 SYDRRFSEEYLSSLGKTIGNIARVVPHGLLVFFPSYPVLDKSIEFWKERGLSAKIDDVKP 184
Query: 565 LFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGA 624
+FVEP+G + F V+ YY I +AN GA
Sbjct: 185 MFVEPRG--KGSFTEVIDAYYEKI----------------------------RSANGSGA 214
Query: 625 SFLAVCRGK---------------IVVGIPFPNINDIQVSLKKKYNDTYRSSKN----LL 665
SFLAVCRGK I+ G+PFP D +V LK ++ D R S+ L
Sbjct: 215 SFLAVCRGKASEGLDFADNNGRGVIITGLPFPPRMDPRVVLKMQFLDEMRRSQGSAGLYL 274
Query: 666 SGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDS 725
SG EWY QA RA+NQAIGR IRHR DYGAI L D RF + RA + W+R ++ YD+
Sbjct: 275 SGQEWYRQQASRAVNQAIGRVIRHRNDYGAIFLCDHRFNQSDARAQLPSWVRPYVRTYDN 334
Query: 726 FDASLEGLKSFFR 738
F + + FFR
Sbjct: 335 FGHIIRDVSQFFR 347
>gi|67470878|ref|XP_651401.1| DNA repair helicase [Entamoeba histolytica HM-1:IMSS]
gi|56468131|gb|EAL46015.1| DNA repair helicase, putative [Entamoeba histolytica HM-1:IMSS]
gi|449710566|gb|EMD49619.1| regulator of telomere elongation helicase rtel1, putative
[Entamoeba histolytica KU27]
Length = 1033
Score = 190 bits (483), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 197/789 (24%), Positives = 329/789 (41%), Gaps = 218/789 (27%)
Query: 27 FPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCKLKN 86
FPYQPY Q+ M +++ +A ++G H L+ESPTGTGK+L LL STL +
Sbjct: 86 FPYQPYQPQIEMM----NSIQQAVKEGK-HLLMESPTGTGKTLVLLHSTLTF-------- 132
Query: 87 QLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKKMTPTI 146
PD V T+ Q AQV
Sbjct: 133 ---------PDMRVV------------------YASRTHNQLAQV--------------- 150
Query: 147 FYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEEC----KLLLG 202
++E KK + VLASR YC ++ ++ + C LLL
Sbjct: 151 -------------VNETKKIG-NIKGIVLASRDLYCIYNPIKTCDDKNYWCTAKPNLLLK 196
Query: 203 DRNLG-CPQ--FKNVHKVRGHPSLQKGGCH-EVHDI----EDLVNVGQVVRGCSYYAARS 254
+++ CP F + K+ H + + E++ I E+LV V Q C YY AR
Sbjct: 197 LKHINPCPYRPFGDDGKILPHVVMACQAVYKELNGIIIPQEELVKVCQKHNLCPYYYARW 256
Query: 255 MADDAQLVFCPYSYIINPVIRGAMEVDI--------KGAILILDEAHNIEDIARDAGSVD 306
++L+ CPY+++ + IR + ++ + + +L++DEAHN+ED D+ + +
Sbjct: 257 ATVRSKLILCPYNFVTSVSIRHSSDIFLIDQNSAHQREFVLVMDEAHNVEDAFMDSLTFN 316
Query: 307 IDEDVL-----------LKLQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKRE 355
E +L +++ E + +++ + LI + W++ R +L ++
Sbjct: 317 FTESLLNQTIETIQFHKKRIKQTPENLLTIS--LLTELISTVESFSIWMKNR--SLPYKD 372
Query: 356 FQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIK-----EATDTESELPH----L 406
+H+ D+A E + S LLE ++ IK + D + PH +
Sbjct: 373 SEHYLYGVFEDQAFLPFVERSPSSSR---LLEAISEYIKVVDNLDDLDIFTREPHVIRYI 429
Query: 407 SGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPA 466
+ + +E + + F R + +++ + Y N + CL+P+
Sbjct: 430 NSFTTQYIEMILFYIQVF--RTPTLTKFFKIVITDY----------NGLREMLFRCLSPS 477
Query: 467 VVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGT-----------CLEAPHVIDVDLQ 515
+ + + S+I SGTLSPM + + EL ++ L HV+
Sbjct: 478 LPMSLLQIVVRSVIFASGTLSPMKAMAQELDIKEHVYKDFIISPGYRMLSTEHVVPPSRV 537
Query: 516 VLTSVIS------------TGPDNYPLNASYKTA---------------DGYKLMEKLCN 548
+IS T DN + + T Y ++ ++
Sbjct: 538 FGRIIISSSLGKSFIFTKKTSQDNEMIEQAGDTMFRVLSKSPGGALVFFSSYNMLNRIVE 597
Query: 549 RWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNN 608
W++ G +++LN K +F+E K S+ F+ K Y
Sbjct: 598 LWKQHGIYTQLNKLKAIFIESKDKSE--FKKDFKEY------------------------ 631
Query: 609 DLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKK 653
+ +KKGA FL V RGK IVVGIP+P++ DI V+LK++
Sbjct: 632 --------QIQSKKGAVFLGVFRGKLSEGIDFGDDMARLVIVVGIPYPSLGDINVNLKRE 683
Query: 654 YNDTYRSSKN--LLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAH 711
YN ++ + KN LSG+EWY QA RA+NQA+GR IRH DYGA +L D+R+ +
Sbjct: 684 YN-SHENLKNPDCLSGSEWYSIQALRAVNQAVGRVIRHINDYGAFLLFDKRYSTNSVKEM 742
Query: 712 ISKWLRKSI 720
+S W++KS+
Sbjct: 743 LSGWMKKSL 751
>gi|22760335|dbj|BAC11156.1| unnamed protein product [Homo sapiens]
Length = 375
Score = 190 bits (483), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 109/293 (37%), Positives = 155/293 (52%), Gaps = 73/293 (24%)
Query: 489 MNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTAD---------- 538
M SFSSELGV F LEA H++ + QV I +GP L A+++ +
Sbjct: 1 MKSFSSELGVTFTIQLEANHIVK-NSQVWVGTIGSGPKGRNLCATFQNTETFEFQDEVGA 59
Query: 539 ------------------GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIV 580
YKL+EKL RW TG W L K + VEP+GG + +F+ +
Sbjct: 60 LLLSVCQTVSQGILCFLPSYKLLEKLKERWLSTGLWHNLELVKTVIVEPQGGEKTNFDEL 119
Query: 581 LKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGK------- 633
L+ YY++I K +G D GA +AVCRGK
Sbjct: 120 LQVYYDAI--------------KYKGEKD-------------GALLVAVCRGKVSEGLDF 152
Query: 634 --------IVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGR 685
I +GIPFPN+ D+QV LK++YND + + LL G +WY QA+RALNQA+GR
Sbjct: 153 SDDNARAVITIGIPFPNVKDLQVELKRQYNDHHSKLRGLLPGRQWYEIQAYRALNQALGR 212
Query: 686 CIRHRFDYGAIILLDERFQEERNR--AHISKWLRKSIKQYDSFDASLEGLKSF 736
CIRHR D+GA+IL+D+RF+ +R + +SKW+R+ I+ + +F+++LE L F
Sbjct: 213 CIRHRNDWGALILVDDRFRNNPSRYISGLSKWVRQQIQHHSTFESALESLAEF 265
>gi|432960238|ref|XP_004086424.1| PREDICTED: regulator of telomere elongation helicase 1-like
[Oryzias latipes]
Length = 1167
Score = 189 bits (481), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 117/351 (33%), Positives = 164/351 (46%), Gaps = 90/351 (25%)
Query: 444 KRDSKNPGGNWTHT--------LSLWCLNPAVVFKDVAELSLS-IILTSGTLSPMNSFSS 494
++ S NP WT + LS WC +P +D+ + IILTSGTLSP++SF+S
Sbjct: 434 RKQSTNP---WTSSSSKKQGNILSYWCFSPGFSMQDLERQGVRCIILTSGTLSPLSSFTS 490
Query: 495 ELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTA----------------- 537
E+ ++F LE HVI+ D Q+ SV+ GPD PL++++
Sbjct: 491 EMRIEFPVSLENSHVIERD-QIFVSVVDRGPDGVPLSSAFDRRFVPENMSSLGNTVANFS 549
Query: 538 -----------DGYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYN 586
+ LMEK + W+ G R+ KP+FVEPKG F ++ YYN
Sbjct: 550 RVVPHGLLVFFPSFPLMEKTLDFWKANGHADRIENVKPMFVEPKGSGS--FSEIIDGYYN 607
Query: 587 SISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGK------------- 633
+S + KG SF AVCRGK
Sbjct: 608 KVS----------------------------DPASKGGSFFAVCRGKASEGLDFADTFSR 639
Query: 634 --IVVGIPFPNINDIQVSLKKKYNDTYRSSK----NLLSGNEWYCNQAFRALNQAIGRCI 687
I+ G+PFP D +V LK ++ + +K L G EWY QAFRA+NQAIGR I
Sbjct: 640 GVIITGLPFPPRMDPRVILKMQFLEEMSKNKAPGVRYLLGQEWYRQQAFRAVNQAIGRVI 699
Query: 688 RHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
RH+ DYGAI L D+RF+ RA + W++ ++ YD F + + FFR
Sbjct: 700 RHKEDYGAIFLCDQRFKSSDARALLPSWVKPHVRVYDGFGNVVRDVSQFFR 750
Score = 160 bits (404), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 96/287 (33%), Positives = 152/287 (52%), Gaps = 28/287 (9%)
Query: 22 GIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQN 81
G+ V+FP+ PY Q +M +V+ L + + +LESPTGTGK+L LLC+TLAW+++
Sbjct: 8 GVTVDFPFPPYDCQKDYMAKVLQCLQQ-----KVNGVLESPTGTGKTLCLLCATLAWREH 62
Query: 82 CKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKK 141
+ IS K + + L F + S +T+G ++
Sbjct: 63 FR-----DTISACK-----IAERLKGENMFPNTTLASWGTAATDGDKQAYYLD------- 105
Query: 142 MTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEECKLLL 201
P I YASRTHSQ++QVI E + T+YR + VL SR+ C N V +E+ + +
Sbjct: 106 -VPKIIYASRTHSQLAQVIGELRNTSYRPKVCVLGSREQLCINPEVMRQESNHVKVHMCR 164
Query: 202 GD-RNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQ 260
G C + NV + S K + + D+EDLV G + C YY +RS+ A
Sbjct: 165 GKVSTRSCLYYNNVDE----RSTDKDLVNSILDVEDLVKFGNKQKVCPYYLSRSLKQQAD 220
Query: 261 LVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDI 307
++F PY+Y+++P R A +++ GA++I DEAHN+E + ++ S D+
Sbjct: 221 IIFMPYNYLLDPKSRRAHNIELSGAVVIFDEAHNLEKMCEESSSFDL 267
>gi|308812532|ref|XP_003083573.1| helicase-related (ISS) [Ostreococcus tauri]
gi|116055454|emb|CAL58122.1| helicase-related (ISS) [Ostreococcus tauri]
Length = 1048
Score = 187 bits (474), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 129/410 (31%), Positives = 192/410 (46%), Gaps = 93/410 (22%)
Query: 385 LLECATKAIKEATDTESELPHLSGMSVITLEGLFSSLT--YFFSRNGSHVSDYQLALQKY 442
+++ + ++ AT T E P + I E LF+ YF +R G +++ +
Sbjct: 399 MVQLGSDFMEAATGTHKETPLTEIANFI--ERLFTKRADQYFVTRVGPDTDNFKTS---- 452
Query: 443 IKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFG 501
+R + P TLS WC P + K++ E ++ S +L SGTLSPM SFSSEL ++F
Sbjct: 453 -QRQRQGP------TLSYWCFFPGLCLKELIEKNVGSFLLASGTLSPMESFSSELAMEFP 505
Query: 502 TCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTAD----------------------- 538
LE PHVI + Q+ V++ GP LN+S++ D
Sbjct: 506 VRLENPHVIQRN-QIWGGVLTHGPGGNVLNSSFRFRDTDNYKKEIGSVILSTAKIVPDGL 564
Query: 539 -----GYKLMEKLCNRWR--ETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQG 591
Y +M + WR E G W+ + A K F+EP + E+F+ K Y +++ G
Sbjct: 565 LVFFPSYGVMNSCIDHWRFVEGGLWAGIEASKTCFIEP--SNSEEFQECYKRYNEALNDG 622
Query: 592 SKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVV 636
++ +GA F AVCRGK I+
Sbjct: 623 TR----------------------------RGAIFFAVCRGKVSEGIDFADKACRGVILT 654
Query: 637 GIPFPNINDIQVSLKKKYNDTYRSSKN-LLSGNEWYCNQAFRALNQAIGRCIRHRFDYGA 695
GIP+ D V K+ + D R++ SGNEWY A RA+NQA+GR IRH+ D+GA
Sbjct: 655 GIPYAGAKDPLVMHKRSFLDKRRANDGESYSGNEWYSQTAMRAVNQALGRAIRHKNDFGA 714
Query: 696 IILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFRDVKGWVG 745
+IL DERF E R +S WLR SI+ + F++ + GL+ FF+ G V
Sbjct: 715 VILADERFANENARNQLSLWLRPSIQVHSVFNSVVSGLRDFFQSNVGSVA 764
Score = 144 bits (363), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 106/308 (34%), Positives = 152/308 (49%), Gaps = 54/308 (17%)
Query: 25 VEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCKL 84
V FPY Y +Q+VF+ R + + R Q ALLESPTGTGK+L LL + LA+ +N
Sbjct: 20 VSFPYDAYDAQIVFIERALEAMCRKQ-----SALLESPTGTGKTLCLLSAALAYARNEGR 74
Query: 85 KNQLANISHSKPDT-EAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKKMT 143
+ + K T E VT+ + A+V +++
Sbjct: 75 AKKRRARAREKASTSETVTEEFVD---------------------AEV-----RRERERA 108
Query: 144 PTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVR----DKENIDEECKL 199
PTI YA+RTHSQ+ QV+ E K LASRKH C + VR D +N C
Sbjct: 109 PTIVYATRTHSQVRQVLGELKVLDSNTRATTLASRKHACAREDVRALVGDAQN--NRCSK 166
Query: 200 LLGDRNLGCPQFKNVHKVRGHPSLQKGGCHE--------VHDIEDLVNVGQVVRG-CSYY 250
L+ +R G KNV + SL + G E V DIEDLV Q RG C +Y
Sbjct: 167 LVAERKCGA---KNVLDM----SLNRKGIGEKFDVFEGGVRDIEDLVIAAQKSRGPCPFY 219
Query: 251 AARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDED 310
+R+ DA+++F PY+Y++N +R +++ + A++I+DEAHN+E A D+ S +
Sbjct: 220 LSRTKCADAEIIFMPYNYLLNDTVRRGLDIVWEDAVVIVDEAHNLESSAADSMSYSLTAA 279
Query: 311 VLLKLQME 318
L K E
Sbjct: 280 KLAKAIQE 287
>gi|443694244|gb|ELT95437.1| hypothetical protein CAPTEDRAFT_179377 [Capitella teleta]
Length = 837
Score = 187 bits (474), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 114/333 (34%), Positives = 163/333 (48%), Gaps = 76/333 (22%)
Query: 457 TLSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQ 515
TLS WC +P+ D+ + SIILTSGTLSP++SF SE+G+ F LE PHVID Q
Sbjct: 461 TLSYWCFSPSHTMLDLISRGVKSIILTSGTLSPISSFKSEMGIDFQIELENPHVIDPK-Q 519
Query: 516 VLTSVISTGPDNYPLNASYKTA----------------------------DGYKLMEKLC 547
V +S GPDN PL + Y T Y +M++
Sbjct: 520 VWVGTLSKGPDNEPLCSDYNTRFKESYQKSLGNAVVNFSRIVPHGLLLFFPSYPVMDQCV 579
Query: 548 NRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGN 607
WR WSR++ K ++VEP+ ++ +F + YY+ I N
Sbjct: 580 TNWRSGTLWSRMDQMKSVYVEPR--NKHEFNTTMAAYYDKI------------------N 619
Query: 608 NDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKK 652
+D GA+F AVCRGK ++ G+P+P D +V LK
Sbjct: 620 DD----------TCNGATFAAVCRGKVSEGLDFADRNGRAVVITGLPYPPRMDPKVMLKM 669
Query: 653 KYND-TYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAH 711
K+ D T R+ L+G EWY QA RA+NQAIGR IRH+ D+GAIIL D RF ++R
Sbjct: 670 KFLDETRRAGGKGLTGQEWYGQQATRAVNQAIGRVIRHKDDFGAIILCDRRFADQRAINQ 729
Query: 712 ISKWLRKSIKQYDSFDASLEGLKSFFRDVKGWV 744
+ W+R ++Y F ++ + +FF++ + V
Sbjct: 730 LPSWVRPKCQRYSQFGMAVRDMIAFFKEAERMV 762
Score = 160 bits (404), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 102/305 (33%), Positives = 156/305 (51%), Gaps = 29/305 (9%)
Query: 22 GIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW--Q 79
G+ V FP+ PY Q+ +M V+S L Q +A+LESPTGTGK+L LLCS+LAW
Sbjct: 8 GVSVNFPFDPYPCQVDYMSSVVSCLKTGQ-----NAILESPTGTGKTLCLLCSSLAWLET 62
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTN-GQTAQVAMNNKNV 138
+ ++ +Q NI+ + D +GG S N G+ N+
Sbjct: 63 KRAQITSQRWNIAQANAD---------DGG-----------EGSLNVGKQDLAGKLNEAA 102
Query: 139 KKKMTPTIFYASRTHSQISQVISEYKKTAY-RVPMAVLASRKHYCTNKYVRDKENIDEEC 197
P I YASRTHSQ++QVI E K++AY ++VL SR+ C + V +E+ +
Sbjct: 103 VLLAPPKIIYASRTHSQLTQVIQELKRSAYSHFKVSVLGSREQMCIHPQVMKEESNTVKV 162
Query: 198 KLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMAD 257
+ F N + +++ DIEDLV G+ + C YY AR + +
Sbjct: 163 HMCRSKVTSRTCHFYNNMDTEFSADAKHNFTNQLMDIEDLVVQGKKMNCCPYYVARELKN 222
Query: 258 DAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQM 317
DA ++F PY+Y+++P R A V+++G I+I DEAHN+E + D+ S D +
Sbjct: 223 DADIIFLPYNYLLDPKSRKAHGVELQGNIVIFDEAHNLEKMCEDSASFDFTSTDIASAMR 282
Query: 318 ELEQV 322
E++ V
Sbjct: 283 EVDSV 287
>gi|195131929|ref|XP_002010396.1| GI15901 [Drosophila mojavensis]
gi|229891624|sp|B4L1Z2.1|RTEL1_DROMO RecName: Full=Regulator of telomere elongation helicase 1 homolog
gi|193908846|gb|EDW07713.1| GI15901 [Drosophila mojavensis]
Length = 1014
Score = 186 bits (472), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 113/343 (32%), Positives = 164/343 (47%), Gaps = 88/343 (25%)
Query: 451 GGNWTHTLS-------LWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGT 502
G N T T+S WC NP + + + S+ILTSGTL+P+ +EL +
Sbjct: 441 GNNATSTVSKTAKIINFWCFNPGFGMEQLLNTQVRSVILTSGTLAPLKPLIAELAIPVAQ 500
Query: 503 CLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTAD------------------------ 538
LE PH++D QV +I TGPD L ++YK D
Sbjct: 501 HLENPHIVDQS-QVYVKIIGTGPDREQLISNYKNRDNPKYISSLGQTILNVSRIVPDGLL 559
Query: 539 ----GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKC 594
Y ++ + + W+ +G W+ L+++KP+F+EP+G Q F ++ +Y +I
Sbjct: 560 VFFPSYPMLNQCVDAWQASGLWADLSSRKPIFLEPRGKDQ--FTSTMEEFYQAIR----- 612
Query: 595 AVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIP 639
+ KGA F+AVCRGK I+ G+P
Sbjct: 613 -------------------------DSKGACFMAVCRGKVSEGLDFADRNGRAVIITGLP 647
Query: 640 FPNINDIQVSLKKKYNDTYRSSKN-LLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIIL 698
FP + D +V LK++Y +T R+ +N LLSG EWY A RA+NQAIGR IRHR DYGAI+L
Sbjct: 648 FPPLKDPKVILKRRYLETNRTKENQLLSGQEWYNLDATRAVNQAIGRVIRHRHDYGAILL 707
Query: 699 LDERFQEERNRAHISKWLRKSI---KQYDSFDASLEGLKSFFR 738
D RFQ+ +SKW+R + Q F + L+ FF+
Sbjct: 708 CDARFQDASQVQQLSKWIRGHLGARPQSSPFGPIVRELRQFFK 750
Score = 168 bits (426), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 162/302 (53%), Gaps = 32/302 (10%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ GI V FP++PY Q FM +VI L RDG + +LESPTGTGK+LSLLCS+LAW
Sbjct: 6 IAGIPVHFPFEPYEVQRAFMEKVIMCL----RDG-TNGVLESPTGTGKTLSLLCSSLAWI 60
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVK 139
+ + ++Q+ N+ + + + A GG S G + +A+
Sbjct: 61 RTRQSEHQI-NMQKLQMEQQQRQ---ATGG-------------SATGAISDLALTMGKAN 103
Query: 140 KKMTPTIFYASRTHSQISQVISEYKKTAY-RVPMAVLASRKHYCTNKYVRDKE---NIDE 195
P + YASRTHSQ++Q + E K+TAY + VL SR C + V ++ N
Sbjct: 104 NWGVPKVIYASRTHSQLTQAMRELKRTAYASMRSVVLGSRDQLCIHPDVMKEQGNSNKVN 163
Query: 196 ECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSM 255
CKL + + C V + HP + + DIEDLV VGQ ++ C YYA++ +
Sbjct: 164 MCKLKVHAKT--CSFQLRVESKKDHPDFRGPS---IMDIEDLVKVGQRLKMCPYYASKEL 218
Query: 256 ADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDI-DEDVLLK 314
A + F PY+Y+++P R A ++++ I+ILDEAHNIE I ++ SV I DV +
Sbjct: 219 VSSADITFMPYNYLLDPKARKANKIELSNTIVILDEAHNIEKICEESASVQIRSSDVAMA 278
Query: 315 LQ 316
++
Sbjct: 279 IE 280
>gi|123491434|ref|XP_001325843.1| helicase [Trichomonas vaginalis G3]
gi|121908748|gb|EAY13620.1| helicase, putative [Trichomonas vaginalis G3]
Length = 747
Score = 186 bits (472), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 189/760 (24%), Positives = 332/760 (43%), Gaps = 158/760 (20%)
Query: 19 HVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
++ + + FPY+PY Q +M +VI + D +A+LESPTGTGK+LSLLCS L+W
Sbjct: 4 NINEVSIHFPYKPYPLQETYMSKVIESCDTGN-----YAILESPTGTGKTLSLLCSVLSW 58
Query: 79 QQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNV 138
+Q +N + I +S T+ Q + V K
Sbjct: 59 RQQ---RNTSSRIIYSS---------------------------RTHSQLSNVIKELKRT 88
Query: 139 KKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEECK 198
K + T +I ASRT+ + I + + + L SR +C +++ D E K
Sbjct: 89 KFQPTTSII-ASRTYLCLHDNIQKMESS--------LQSR--FCRELRQKNQCIYDNESK 137
Query: 199 LLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADD 258
+ + K + + DI+ V++ + C ++ ++
Sbjct: 138 I---------------------EQVSKKVINSLLDIDSFVDICRNEAVCPFFVSQFNVKT 176
Query: 259 AQLVFCPYSYIINPVIRGAM-EVDIKGAILILDEAHNIEDIARD--AGSVDIDEDVLLKL 315
A + PY+YI +P+ R ++ V +++I DEAHN + + + SV ++ +L+
Sbjct: 177 ADFILSPYTYIADPISRSSLPSVVFNKSVVIFDEAHNFPEQCCEYFSMSVPFNKFCVLRS 236
Query: 316 QMELEQVCSVNPMIYQPL--IEMTQDLVGWIERRKATL------------AKREFQHFFS 361
+ +Q + ++ + +E+ ++ + + L AK F F
Sbjct: 237 FLSRQQSNVIGEVVTFGITSVELAKEFSNLVCDKLELLRKEIHQNFVLKNAKFLFDFFSK 296
Query: 362 CWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVITLEGLFSSL 421
C + +R + + P+L C ++ +E+ D + F L
Sbjct: 297 CKIDYRTIRPFKRLLKAFLDNPVLY-CLSQNEQESLD--------------LILQFFDFL 341
Query: 422 TYFFSRNGSHVSD-YQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELS-LSI 479
+ RN S + + Y ++L H +++C P F ++ L +I
Sbjct: 342 YHENKRNESLIDNFYTISLST-------------DHCFNIYCFTPEKAFSEIVNLQPRTI 388
Query: 480 ILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTADG 539
ILTSGTL+P+ +F+S G +F LE PH+ + Q+L GP L+ +Y
Sbjct: 389 ILTSGTLAPLETFASYFGYKFPIILENPHIAKPE-QLLVICCGEGPFGNRLSFTY----- 442
Query: 540 YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRK 599
NR + +A LF GS +V ++S+S+ ++ K
Sbjct: 443 -------ANRNDNQQKVELKSALSKLFSLSPNGS-----LVFFPSFSSLSEFDVHSIDTK 490
Query: 600 KRVKREGNN--DLNTIESQ--ENANK-KGASFLAVCRGKI---------------VVGIP 639
K++ E D ++I SQ ENA K +GA+ AVCRGK+ VVGIP
Sbjct: 491 KKIFIEPRTFGDFSSIVSQFKENAVKEEGAALFAVCRGKMSEGIDFSDDYARSVFVVGIP 550
Query: 640 FPNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILL 699
FPN D +V L+K++ + SK SG +WY + A R +NQ+IGR IRH+ D+ ++L+
Sbjct: 551 FPNTKDPKVILRKQFYE----SKKKGSGMKWYIDSAMRVVNQSIGRAIRHKDDWSVVVLI 606
Query: 700 DERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFRD 739
D R+ + + KW++ S+ ++++ + LK F+ +
Sbjct: 607 DNRY--DGMIELLPKWVKPSVITLNNWNVLEKKLKLFYEE 644
>gi|348533666|ref|XP_003454326.1| PREDICTED: regulator of telomere elongation helicase 1-like
[Oreochromis niloticus]
Length = 1193
Score = 186 bits (472), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 113/329 (34%), Positives = 158/329 (48%), Gaps = 79/329 (24%)
Query: 458 LSLWCLNPAVVFKDVAELSLS-IILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQV 516
LS WC +P +D+ + IILTSGTLSP++SF+SE+ ++F LE HVI+ D Q+
Sbjct: 451 LSYWCFSPGFSMQDLVNQGVRCIILTSGTLSPLSSFTSEMRIEFPVRLENSHVIERD-QI 509
Query: 517 LTSVISTGPDNYPLNASYKTA----------------------------DGYKLMEKLCN 548
S+I+ GPD L++++ + LMEK
Sbjct: 510 FVSIIAQGPDGAHLSSAFDRRFVPENMASLGNTVANLSRVVPHGLLVFFPSFPLMEKTLE 569
Query: 549 RWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNN 608
W+ G +R+ KP+FVEPKG + F V+ YY+ ++
Sbjct: 570 FWKANGHANRIENIKPMFVEPKG--KGTFNDVIDGYYSKVN------------------- 608
Query: 609 DLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKK 653
+ KG SF AVCRGK I+ G+PFP ND +V LK +
Sbjct: 609 ---------DPASKGGSFFAVCRGKASEGLDFADTYGRGVIITGLPFPPKNDPRVILKMQ 659
Query: 654 YNDTYRSSK----NLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNR 709
+ D K LSG +WY QAFRA+NQAIGR IRH+ DYGAI L D+RF+ R
Sbjct: 660 FLDEMNRKKAPGLKYLSGQDWYKQQAFRAVNQAIGRVIRHKEDYGAIFLCDQRFKSADAR 719
Query: 710 AHISKWLRKSIKQYDSFDASLEGLKSFFR 738
A + W+R ++ DSF + + FFR
Sbjct: 720 AQLPSWVRSYVRLCDSFGNVVRDVSQFFR 748
Score = 170 bits (431), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 106/289 (36%), Positives = 156/289 (53%), Gaps = 29/289 (10%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ G+ V FP+ PY Q +M +VI L + + +LESPTGTGK+L LLC+TLAW+
Sbjct: 6 LSGVTVNFPFSPYECQKAYMNKVIECLQKK-----VNGVLESPTGTGKTLCLLCATLAWR 60
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVK 139
+N K IS K + + L E P+T P S+ G A +K
Sbjct: 61 ENFK-----GTISARK-----IAERLGK------EMFPNT-PLSSWGTAA--TDGDKPTY 101
Query: 140 KKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEECKL 199
P I YASRTHSQ++QVISE K T+YR + VL SR+ C N+ V +E+ + +
Sbjct: 102 YTDVPKIVYASRTHSQLAQVISELKNTSYRPKVCVLGSREQLCINQEVMRQESNHVKVHM 161
Query: 200 LLGDRNL-GCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADD 258
G + C + NV + S + + + D+EDLV G R C YY +RS+
Sbjct: 162 CRGKVSTRSCVYYNNVEE----KSTDRDLVNSILDVEDLVQFGTKQRVCPYYLSRSLKQQ 217
Query: 259 AQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDI 307
A ++F PY+Y+++P R A +D+ GA++I DEAHN+E ++ S D+
Sbjct: 218 ADVIFMPYNYLLDPKSRKAHNIDLNGAVVIFDEAHNVEKTCEESTSFDL 266
>gi|320165278|gb|EFW42177.1| DNA repair helicase [Capsaspora owczarzaki ATCC 30864]
Length = 1329
Score = 186 bits (471), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 117/368 (31%), Positives = 163/368 (44%), Gaps = 78/368 (21%)
Query: 418 FSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSL 477
+ F SR+ + Q Y + D+ T L +WCLN A+ F D E
Sbjct: 800 WGDFALFASRSDAQDRSSQRGTIAYEEEDAP-----ITTALEIWCLNSALCFSDFREGVR 854
Query: 478 SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTA 537
S+ILTSGTLSPMNSF+SELG F LE HVI D +S GP L A+Y
Sbjct: 855 SVILTSGTLSPMNSFASELGTAFPVVLEGAHVIPPD-HTFVRCLSRGPSTNALRATYSVL 913
Query: 538 D----------------------------------GYKLMEKLCNRWRETGQWSRLNAKK 563
Y +M+K RW ++G + L
Sbjct: 914 SDYTSSTIFFDDVGSIISQVAHTVPRGTGTLVFFASYSMMDKAATRWSQSGFLNELRLTH 973
Query: 564 PLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKG 623
+ EP+ E ++ + I A + R G
Sbjct: 974 QVVFEPREAKM--LEETMRMFNLGIYTSPPPAHPQLPR---------------------G 1010
Query: 624 ASFLAVCRGKI---------------VVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSGN 668
+ AVCRGK+ VGIPFPN+ Q+ +K+ YND + S ++LL+G+
Sbjct: 1011 SVMFAVCRGKVSEGIDFADNQARAVLAVGIPFPNLGTDQIVIKRSYNDLHASERDLLTGS 1070
Query: 669 EWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDA 728
+WY QA+RALNQA+GRCIRHR D+GAI+LLDERF+ +S+W+R+ ++
Sbjct: 1071 QWYDIQAYRALNQALGRCIRHRNDWGAILLLDERFRHANAINSLSRWVRQRLQHNTELPE 1130
Query: 729 SLEGLKSF 736
L L+SF
Sbjct: 1131 LLTHLRSF 1138
Score = 114 bits (284), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 95/170 (55%), Gaps = 12/170 (7%)
Query: 144 PTIFYASRTHSQISQVISEYKKTAYRVP------MAVLASRKHYCTNKYVRD--KENIDE 195
P I++ +RTH QI+Q++ E ++ +Y M +LASR C + V + I +
Sbjct: 424 PIIYFTTRTHKQIAQIVRELRRISYLTDSDSPDLMTILASRSKTCVHPLVNSGKPDEIRD 483
Query: 196 ECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSM 255
C + R C + + S ++ + V +IEDL++ GC Y+A R M
Sbjct: 484 RCNEAVQARR--CSHREKTTTMVD--SFRRKSEYIVWEIEDLISFSDKSGGCPYFATREM 539
Query: 256 ADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSV 305
A A +V CPY+Y+++PVIR ME+D+ I+I+DEAHNIED+ RD+ S+
Sbjct: 540 AGFANIVLCPYNYVLDPVIRKNMEIDLSNNIVIVDEAHNIEDVCRDSLSM 589
Score = 75.5 bits (184), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 51/76 (67%), Gaps = 8/76 (10%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+GG+ V FP+ PY +QL M +VI L+ Q +ALLESPTGTGKSL+LLCS LAW+
Sbjct: 107 IGGVSVRFPFPPYPTQLTMMQKVIQALESKQ-----NALLESPTGTGKSLTLLCSALAWR 161
Query: 80 QNCKLKNQLANISHSK 95
++ K N+ HS+
Sbjct: 162 RSYLNK---VNMQHSE 174
>gi|395836775|ref|XP_003791325.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8-like [Otolemur garnettii]
Length = 880
Score = 185 bits (470), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 178/702 (25%), Positives = 300/702 (42%), Gaps = 163/702 (23%)
Query: 146 IFYASRTHSQISQVISEYKKTAY--RVPMAVLASRKHYCTN------------------- 184
I+Y SRTHSQ++Q + E +K+ + V + L SR++ C N
Sbjct: 229 IYYCSRTHSQLAQFVHEVQKSPFGKDVRLVSLGSRQNLCVNQDVKRLGSVQLINDRCMDM 288
Query: 185 ---KYVRDKENIDEECKLLLGDRNLGCP--QFKNVHKVRGHPSLQKGGCHEVHDIEDLVN 239
K+ + E +E+ K ++ CP ++++H +R EV DIE LV
Sbjct: 289 QRSKHEKRNEAEEEKPKRRRQEKQAACPFYSYEHMHLLRDEV------LAEVKDIEQLVA 342
Query: 240 VGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIA 299
+G+ C YY +R AQLV PY +++ R A + ++G ++I+DEAHN+ D
Sbjct: 343 LGKEAWACPYYGSRFAIPAAQLVVLPYQMLLHAATREAAGIQLQGQVVIIDEAHNLIDAI 402
Query: 300 RDAGSVDIDEDVLLKLQMELEQ---------------VC----------SVNPMIYQPLI 334
SV++ L + +L Q +C ++N ++Q I
Sbjct: 403 TGIHSVEVSGSQLCQAHSQLLQYMERYGCRALGSAGRLCIPSVVWMELKTINDFLFQSQI 462
Query: 335 E---------------MTQDLVGWIERRKATLAKRE------FQHFFSCWTGDKALRELQ 373
+ +++ L G+ ER A L+ +E FQ F L+ LQ
Sbjct: 463 DNINLFKVRRYCEKSMVSRKLFGFTERYGAVLSSQEKPRLTGFQEF---------LQRLQ 513
Query: 374 EANISRQCFPILLECATKAIKEATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVS 433
P + E + E P ++ +EG ++LT +++G +
Sbjct: 514 ---------PGVTEAPATPVDEGQARPPTSP------LMHIEGFLTALTTA-NQDGRIIL 557
Query: 434 DYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFS 493
++Q +L + +L LNPAV F V + ++++ GTL P++ F
Sbjct: 558 NHQGSLSQ--------------SSLKFLLLNPAVHFAQVVKECRAMVIAGGTLQPVSDFR 603
Query: 494 SEL----GVQFGTCLE--APHVIDVDLQVLTSVISTGPDNYPLNASYKTADGYKLMEK-- 545
+L GV+ +E HVI D +L V+STG N PL+ Y+ + ++M++
Sbjct: 604 EQLLACAGVEAERVVEFSCGHVIPPD-NILPIVLSTGISNRPLDFKYQHRELPQMMDEAG 662
Query: 546 -----LCN---------------------RWRETGQWSRLNAKKPLFVEPKGGSQEDFEI 579
LCN W ++G RL ++K +F EPK +Q E
Sbjct: 663 RILFCLCNVIPGGVVCFFPSYEYQRQVHAYWEKSGVLCRLASRKKIFQEPKSTNQ--VEQ 720
Query: 580 VLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIP 639
VL Y I C VR K V G L+ + + + + L C ++VG+P
Sbjct: 721 VLTEYSKCIE---NCGQVRGKMVT--GALLLSVVGGKMSEGINFSDNLGRC--VVMVGMP 773
Query: 640 FPNINDIQVSLKKKYNDTY--RSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAII 697
+PN+ ++ K Y D R G N RA+NQ+IGR IRH+ D+ +I+
Sbjct: 774 YPNVRSPELQEKMAYLDQTLPRIPGKAPPGKALAENLCMRAVNQSIGRAIRHQRDFASIV 833
Query: 698 LLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFRD 739
LD+R+ + A + W+R +K +F +++ L+ F R+
Sbjct: 834 FLDQRYAQPPVLAKMPGWIRDRVKTKATFGSAIAMLQKFHRE 875
Score = 55.1 bits (131), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 5/68 (7%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ GI FP+ PY Q FM ++ L+ + + ESPTGTGKSLSL+C +L+W
Sbjct: 8 IDGIHFPFPFTPYSIQKDFMAQLYQVLEAGK-----IGIFESPTGTGKSLSLICGSLSWL 62
Query: 80 QNCKLKNQ 87
++ + K +
Sbjct: 63 RDFEQKKR 70
>gi|195049134|ref|XP_001992658.1| GH24089 [Drosophila grimshawi]
gi|229891623|sp|B4JNS2.1|RTEL1_DROGR RecName: Full=Regulator of telomere elongation helicase 1 homolog
gi|193893499|gb|EDV92365.1| GH24089 [Drosophila grimshawi]
Length = 986
Score = 185 bits (470), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 107/329 (32%), Positives = 163/329 (49%), Gaps = 81/329 (24%)
Query: 458 LSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQV 516
++ WC NP + + + S+ILTSGTL+P+ +EL + LE PH+++ + QV
Sbjct: 455 INFWCFNPGFGMEQLLNTHVRSVILTSGTLAPLKPLIAELAIPVAQHLENPHIVN-EAQV 513
Query: 517 LTSVISTGPDNYPLNASYKTAD----------------------------GYKLMEKLCN 548
+I TGPD L ++YK D Y ++ + +
Sbjct: 514 YVKIIGTGPDREQLISNYKNRDNPKYISSLGQTILNVSRIVPDGLLVFFPSYPMLNQCVD 573
Query: 549 RWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNN 608
W+ +G W+ ++++KP+F+EP+G Q F ++ +Y +I
Sbjct: 574 AWQASGLWADISSRKPIFLEPRGKDQ--FTSTMEEFYQAIR------------------- 612
Query: 609 DLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKK 653
+ KGA F+AVCRGK I+ G+PFP + D +V LK++
Sbjct: 613 -----------DSKGACFMAVCRGKVSEGLDFADRNGRAVIITGLPFPPLKDPKVILKRR 661
Query: 654 YNDTYRSSKN-LLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHI 712
Y +T R+ +N LLSGNEWY +A RA+NQAIGR IRHR DYGAI+L D RFQ+ +
Sbjct: 662 YLETNRTRENQLLSGNEWYNLEATRAVNQAIGRVIRHRNDYGAILLCDARFQDASQVQQL 721
Query: 713 SKWLRKSI---KQYDSFDASLEGLKSFFR 738
SKW+R + Q F + L+ FF+
Sbjct: 722 SKWIRNHLGARPQSSPFGPIVRELRQFFK 750
Score = 160 bits (406), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 163/302 (53%), Gaps = 31/302 (10%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ GI V FP++PY Q +M +VI L RDG + +LESPTGTGK+LSLLCSTL W
Sbjct: 6 IAGIPVHFPFEPYDVQRAYMEKVIICL----RDG-TNGVLESPTGTGKTLSLLCSTLGWI 60
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVK 139
+ + + QL N+ + D + A G + + I S N
Sbjct: 61 RTRQSEVQL-NMQKLQHDQQTQLTGAAGAGAAMGSEIAAVIGKSNNWGV----------- 108
Query: 140 KKMTPTIFYASRTHSQISQVISEYKKTAY-RVPMAVLASRKHYCTNKYV-RDKENIDE-- 195
P + YASRTHSQ++Q + E K+TAY + VL SR C + V R++ N ++
Sbjct: 109 ----PKVIYASRTHSQLTQAMRELKRTAYANMRAVVLGSRDQLCIHPDVMREQGNSNKVN 164
Query: 196 ECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSM 255
CKL + ++ C V + HP + + DIEDLV VGQ ++ C Y+A++ +
Sbjct: 165 MCKLKVHAKS--CTFQLRVESKKDHPDFRGPS---IMDIEDLVKVGQRLKMCPYFASKEL 219
Query: 256 ADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDI-DEDVLLK 314
+ A + F PY+Y+++P R A ++++ AI+ILDE HNIE I ++ SV I DV +
Sbjct: 220 VNSADITFMPYNYLLDPKARKANKIELSNAIVILDEGHNIEKICEESASVQIRSSDVAIA 279
Query: 315 LQ 316
++
Sbjct: 280 IE 281
>gi|195162511|ref|XP_002022098.1| GL14463 [Drosophila persimilis]
gi|229891625|sp|B4GU19.1|RTEL1_DROPE RecName: Full=Regulator of telomere elongation helicase 1 homolog
gi|194103996|gb|EDW26039.1| GL14463 [Drosophila persimilis]
Length = 1009
Score = 185 bits (469), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 109/329 (33%), Positives = 159/329 (48%), Gaps = 81/329 (24%)
Query: 458 LSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQV 516
++ WC NP + + + S+ILTSGTL+P+ +EL + LE PH++D QV
Sbjct: 455 VNFWCFNPGFGMEQLLNTQVRSVILTSGTLAPLKPLIAELAIPVAQHLENPHIVDQS-QV 513
Query: 517 LTSVISTGPDNYPLNASYKTAD----------------------------GYKLMEKLCN 548
+I TGPD L +++K D Y ++ K +
Sbjct: 514 YVKIIGTGPDRQQLISNFKNRDNPKYISSLGQTILNVARIVPDGLLVFFPSYPMLNKCVD 573
Query: 549 RWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNN 608
W+ +G W+ ++ KKP+FVEP+G Q F ++ +Y +I
Sbjct: 574 AWQASGLWADISCKKPIFVEPRGKDQ--FTSTMEEFYQAIR------------------- 612
Query: 609 DLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKK 653
+ KGA F+AVCRGK I+ G+PFP + D +V LK++
Sbjct: 613 -----------DSKGAVFMAVCRGKVSEGLDFADRNGRAVIITGLPFPPLKDPKVILKRR 661
Query: 654 YNDTYRSSKN-LLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHI 712
Y +T R+ +N LLSG EWY A RA+NQAIGR IRHR DYGAI+L D RFQ+ +
Sbjct: 662 YLETNRTKENQLLSGQEWYNLDATRAVNQAIGRVIRHRNDYGAILLCDSRFQDASQVQQL 721
Query: 713 SKWLRKSI---KQYDSFDASLEGLKSFFR 738
SKW+R + Q F + L+ FF+
Sbjct: 722 SKWIRGHLGARPQSSPFGPIVRELRQFFK 750
Score = 159 bits (402), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 104/302 (34%), Positives = 155/302 (51%), Gaps = 33/302 (10%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ GI V FP++PY Q +M +VI L RDG + +LESPTGTGK+LSLLC++LAW
Sbjct: 6 IAGIPVHFPFEPYNVQRDYMEKVIICL----RDG-TNGVLESPTGTGKTLSLLCASLAWI 60
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVK 139
+ + ++Q I E G +++AM
Sbjct: 61 RTRQSEHQQQMIKLKATSKEGGPGS------------------GPGGDLSELAMTVGQAN 102
Query: 140 KKMTPTIFYASRTHSQISQVISEYKKTAY-RVPMAVLASRKHYCTNKYVRDKE---NIDE 195
P + YASRTHSQ++Q + E K+TAY + VL SR C + V ++ N
Sbjct: 103 NWGVPKVIYASRTHSQLNQAMRELKRTAYANMRSVVLGSRDQLCIHPEVMKEQGNSNKVN 162
Query: 196 ECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSM 255
CKL + + C V + HP + + DIEDLV VGQ ++ C YYA++ +
Sbjct: 163 LCKLRVHSKT--CTFQLRVESKKDHPDFRGPS---IMDIEDLVRVGQKLKMCPYYASKEL 217
Query: 256 ADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDI-DEDVLLK 314
A + F PY+Y+++P R A ++++ I+ILDEAHNIE I ++ SV I DV +
Sbjct: 218 VAQADITFMPYNYLLDPKARKANKIELGNTIIILDEAHNIEKICEESASVQIRSSDVAMA 277
Query: 315 LQ 316
++
Sbjct: 278 IE 279
>gi|198467617|ref|XP_001354453.2| GA17940 [Drosophila pseudoobscura pseudoobscura]
gi|229891755|sp|Q29FS3.2|RTEL1_DROPS RecName: Full=Regulator of telomere elongation helicase 1 homolog
gi|198149329|gb|EAL31506.2| GA17940 [Drosophila pseudoobscura pseudoobscura]
Length = 1009
Score = 185 bits (469), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 109/329 (33%), Positives = 159/329 (48%), Gaps = 81/329 (24%)
Query: 458 LSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQV 516
++ WC NP + + + S+ILTSGTL+P+ +EL + LE PH++D QV
Sbjct: 455 VNFWCFNPGFGMEQLLNTQVRSVILTSGTLAPLKPLIAELAIPVAQHLENPHIVDQS-QV 513
Query: 517 LTSVISTGPDNYPLNASYKTAD----------------------------GYKLMEKLCN 548
+I TGPD L +++K D Y ++ K +
Sbjct: 514 YVKIIGTGPDRQQLISNFKNRDNPKYISSLGQTILNVARIVPDGLLVFFPSYPMLNKCVD 573
Query: 549 RWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNN 608
W+ +G W+ ++ KKP+FVEP+G Q F ++ +Y +I
Sbjct: 574 AWQASGLWADISCKKPIFVEPRGKDQ--FTSTMEEFYQAIR------------------- 612
Query: 609 DLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKK 653
+ KGA F+AVCRGK I+ G+PFP + D +V LK++
Sbjct: 613 -----------DSKGAVFMAVCRGKVSEGLDFADRNGRAVIITGLPFPPLKDPKVILKRR 661
Query: 654 YNDTYRSSKN-LLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHI 712
Y +T R+ +N LLSG EWY A RA+NQAIGR IRHR DYGAI+L D RFQ+ +
Sbjct: 662 YLETNRTKENQLLSGQEWYNLDATRAVNQAIGRVIRHRNDYGAILLCDSRFQDASQVQQL 721
Query: 713 SKWLRKSI---KQYDSFDASLEGLKSFFR 738
SKW+R + Q F + L+ FF+
Sbjct: 722 SKWIRGHLGARPQSSPFGPIVRELRQFFK 750
Score = 159 bits (402), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 104/302 (34%), Positives = 155/302 (51%), Gaps = 33/302 (10%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ GI V FP++PY Q +M +VI L RDG + +LESPTGTGK+LSLLC++LAW
Sbjct: 6 IAGIPVHFPFEPYNVQRDYMEKVIICL----RDG-TNGVLESPTGTGKTLSLLCASLAWI 60
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVK 139
+ + ++Q I E G +++AM
Sbjct: 61 RTRQSEHQQQMIKLKATSKEGGPGS------------------GPGGDLSELAMTVGQAN 102
Query: 140 KKMTPTIFYASRTHSQISQVISEYKKTAY-RVPMAVLASRKHYCTNKYVRDKE---NIDE 195
P + YASRTHSQ++Q + E K+TAY + VL SR C + V ++ N
Sbjct: 103 NWGVPKVIYASRTHSQLNQAMRELKRTAYANMRSVVLGSRDQLCIHPEVMKEQGNSNKVN 162
Query: 196 ECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSM 255
CKL + + C V + HP + + DIEDLV VGQ ++ C YYA++ +
Sbjct: 163 LCKLRVHSKT--CTFQLRVESKKDHPDFRGPS---IMDIEDLVRVGQKLKMCPYYASKEL 217
Query: 256 ADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDI-DEDVLLK 314
A + F PY+Y+++P R A ++++ I+ILDEAHNIE I ++ SV I DV +
Sbjct: 218 VAQADITFMPYNYLLDPKARKANKIELGNTIIILDEAHNIEKICEESASVQIRSSDVAMA 277
Query: 315 LQ 316
++
Sbjct: 278 IE 279
>gi|195448955|ref|XP_002071885.1| GK24923 [Drosophila willistoni]
gi|229891630|sp|B4NDG5.1|RTEL1_DROWI RecName: Full=Regulator of telomere elongation helicase 1 homolog
gi|194167970|gb|EDW82871.1| GK24923 [Drosophila willistoni]
Length = 998
Score = 184 bits (467), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 114/370 (30%), Positives = 177/370 (47%), Gaps = 87/370 (23%)
Query: 457 TLSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQ 515
++ WC NP + + + S+ILTSGTL+P+ +EL + LE PH++D Q
Sbjct: 459 VINFWCFNPGFGMEQLLNTQVRSVILTSGTLAPLKPLIAELAIPVAQHLENPHIVDQS-Q 517
Query: 516 VLTSVISTGPDNYPLNASYKTAD----------------------------GYKLMEKLC 547
V +I TGPD L +++K D Y ++ K
Sbjct: 518 VYVKIIGTGPDRQQLISNFKNRDNPKYISSLGQTILNVSRIVPDGLLVFFPSYPMLNKCV 577
Query: 548 NRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGN 607
+ W+ +G W+ + AKKP+F+EP+G Q F ++ +Y +I
Sbjct: 578 DAWQTSGLWADIAAKKPIFLEPRGKDQ--FTTTMEEFYQAIR------------------ 617
Query: 608 NDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKK 652
+ KGA F+AVCRGK I+ G+P+P + D +V LK+
Sbjct: 618 ------------DSKGACFMAVCRGKVSEGLDFADRNGRAVIITGLPYPPLKDPKVILKR 665
Query: 653 KYNDTYRSSKN-LLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAH 711
+Y + R+ +N LL+G EWY A RA+NQAIGR IRHR DYGAI+L D RFQ+
Sbjct: 666 RYLEANRTKENQLLTGQEWYNLDATRAVNQAIGRVIRHRHDYGAILLCDSRFQDNSQVQQ 725
Query: 712 ISKWLRKSI---KQYDSFDASLEGLKSFFRDVKGWVGKKMFNGLENSDNDVDHVSSMDQC 768
+SKW+R + Q F + L+ FFR + + M E +D + + ++ +
Sbjct: 726 LSKWIRGHLGARPQCSPFGPIVRELRQFFRHAE----ETMEQPKERTDEPL--LKNVYKT 779
Query: 769 KEVTKQNTQE 778
+ VT++N +E
Sbjct: 780 EAVTQENNEE 789
Score = 172 bits (436), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 104/292 (35%), Positives = 161/292 (55%), Gaps = 30/292 (10%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ GI V FP++PY Q FM +VI L RDG + +LESPTGTGK+LSLLCS+LAW
Sbjct: 6 IAGIPVHFPFEPYEVQRAFMEKVIICL----RDG-TNGVLESPTGTGKTLSLLCSSLAWI 60
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVK 139
+ + + Q + +A + G +P G+ A++A+
Sbjct: 61 RTRQSEQQ----KQIRKLQDAANNTKVGPTGIVP------------GEAAELALTVGKAN 104
Query: 140 KKMTPTIFYASRTHSQISQVISEYKKTAYR-VPMAVLASRKHYCTNKYV-RDKENIDE-- 195
P + YASRTHSQ++Q + E K++AY + VL SR C + V R++ N ++
Sbjct: 105 NWGVPKVIYASRTHSQLTQAMRELKRSAYAGMRSVVLGSRDQLCIHPEVMREQGNSNKVN 164
Query: 196 ECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSM 255
CK+ + + C V + HP + + DIEDLV VGQ ++ C Y+A++ +
Sbjct: 165 MCKMRVHSKT--CSFQLRVESKKDHPDFRGPS---IMDIEDLVKVGQKLKMCPYFASKEL 219
Query: 256 ADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDI 307
+DA + F PY+Y+++P+ R A ++++ I+ILDEAHNIE I ++ SV I
Sbjct: 220 VNDADITFMPYNYLLDPMARKANKIELSNTIVILDEAHNIEKICEESASVQI 271
>gi|91080379|ref|XP_975049.1| PREDICTED: similar to fanconi anemia group J protein [Tribolium
castaneum]
Length = 676
Score = 184 bits (467), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 146/528 (27%), Positives = 229/528 (43%), Gaps = 107/528 (20%)
Query: 286 ILILDEAHNIEDIARDAGSVDI---------DEDVLLKLQMELEQVCSVN----PMIYQP 332
+L DE HNIE I D+ S+ I DE + + E + N P + P
Sbjct: 31 MLYFDEGHNIEKICEDSASIQIKSADIALCIDEVTGVMRALSDETILDFNDKEVPKDFTP 90
Query: 333 -----LIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRELQEANISRQCFPILLE 387
L E+ + ++ + E +F G +A I+ + +L
Sbjct: 91 DELCILKEIFLNFEKVLDEIEVKAGAPEGTYF----EGSYIFEMFNKAGINDGNYNSVLS 146
Query: 388 CATKAIK-EATDTESELPHLS-GMSVIT--LEGLFSSLTYFFSRNGSHVSDYQLALQKYI 443
K I+ A+ E G+ + + L FSS++ F +A+++
Sbjct: 147 VMDKIIQFLASGNEGPFARKGVGLQLFSDLLTIAFSSVSPQFKEKIKRCYKVHIAVEEGK 206
Query: 444 KRD-----SKNPGGNWTHTLSLWCLNPAVVFKDVAELSLS-IILTSGTLSPMNSFSSELG 497
K+ SK + LS WC +P + + + +ILTSGTL+P+ SEL
Sbjct: 207 KKAADDWLSKATLKTRSRVLSYWCFSPGFGMNMLLDQGVHCVILTSGTLAPLKPLISELE 266
Query: 498 VQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTAD------------------- 538
+ G +E PH++ D QV +++ GPD PLN +Y+ D
Sbjct: 267 LNVGVRIENPHIVKGD-QVCVKILTKGPDGEPLNCNYQNRDNPNYLMSLGQVVLNLIRII 325
Query: 539 ---------GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSIS 589
Y +M+K W+E+G W +N K +FVEPK + F + YY+ +
Sbjct: 326 PHGVLIFFPSYPIMQKCQQYWQESGIWDGINKIKAIFVEPK--DKNSFTFAMSEYYSKV- 382
Query: 590 QGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKI--------------- 634
++ N KGA F+ VCRGK+
Sbjct: 383 ---------------------------KDPNYKGAIFMGVCRGKVSEGLDFADSNGRAVF 415
Query: 635 VVGIPFPNINDIQVSLKKKYNDTYRS-SKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDY 693
++G+P+P + D ++ LKK+Y D + K L G++WY +A RA+NQAIGR IRH+ DY
Sbjct: 416 IIGLPYPPLKDPKIILKKRYLDVCNAKDKEYLKGDDWYSLEATRAINQAIGRVIRHKNDY 475
Query: 694 GAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFRDVK 741
GAIILLD RF R + ++S WL+K IK +F A L+ FF++ +
Sbjct: 476 GAIILLDSRFTNPRIQGNLSLWLKKHIKIMQNFGALTRDLRLFFQNAQ 523
>gi|407037674|gb|EKE38739.1| DNA repair helicase, putative [Entamoeba nuttalli P19]
Length = 1034
Score = 182 bits (463), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 190/764 (24%), Positives = 330/764 (43%), Gaps = 162/764 (21%)
Query: 146 IFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEEC----KLLL 201
+ YASRTH+Q++QV++E KK + VLASR YC ++ ++ + C LLL
Sbjct: 138 VVYASRTHNQLAQVVNETKKIG-NIKGIVLASRDLYCIYNPIKTCDDKNYWCTAKPNLLL 196
Query: 202 GDRNLG-CPQ--FKNVHKVRGHPSLQKGGCH-EVHDI----EDLVNVGQVVRGCSYYAAR 253
+++ CP F + KV H + + E++ I E+LV V Q C YY AR
Sbjct: 197 KLKHINPCPYRPFGDDGKVLPHVVMACQAVYKELNGIIKPQEELVKVCQKHNLCPYYYAR 256
Query: 254 SMADDAQLVFCPYSYIINPVIRGAMEVDI--------KGAILILDEAHNIEDIARDAGSV 305
++L+ CPY+++ + IR + ++ + + +L++DEAHN+ED D+ +
Sbjct: 257 WATVRSKLILCPYNFVTSVSIRHSSDIFLIDQNSAHQREFVLVMDEAHNVEDAFMDSLTF 316
Query: 306 DIDEDVL------LKLQMELEQVCSVNPM---IYQPLIEMTQDLVGWIERRKATLAKREF 356
+ E +L +K + + N + + LI + W++ R +L ++
Sbjct: 317 NFTESLLNQTIETIKFHKKRVKQIPENFLTISLLTELISTIESFSIWMKNR--SLPYKDS 374
Query: 357 QHFFSCWTGDKALRELQEANI--SRQCFPILLECATKAIKEA---------TDTESELPH 405
+H+ D+A E + SR LLE ++ IK T + +
Sbjct: 375 EHYLYGVFEDQAFLPFVERSPPSSR-----LLEAISEYIKVVDDLDDLDIFTREPHAIRY 429
Query: 406 LSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNP 465
++ + +E + + F R + +++ + + N + CL+P
Sbjct: 430 INSFTTQYIEMILFYIQVF--RTPTLTKFFKIVVTDH----------NGLREMLFRCLSP 477
Query: 466 AVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGT-----------CLEAPHVIDVDL 514
++ + + S+I SGTLSPM + + EL ++ L HV+
Sbjct: 478 SLPMSLLQMVVRSVIFASGTLSPMKAMAQELDIKEHVYKDFIISPGYRMLSTEHVVPPSR 537
Query: 515 QVLTSVIS------------TGPDNYPLNASYKTA---------------DGYKLMEKLC 547
+IS T DN + + T Y ++ ++
Sbjct: 538 VFGRIIISSSLGKSFIFTKKTSQDNEMIEQAGDTMFRVLSKSRGGALVFFSSYNMLNRIV 597
Query: 548 NRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGN 607
W++ G +++LN K +F+E K K E
Sbjct: 598 ELWKQHGIYTQLNKLKAIFIESKD-------------------------------KNEFK 626
Query: 608 NDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKK 652
D + Q +KKGA FL V RGK IVVGIP+P++ DI V+LK+
Sbjct: 627 KDFKEYQIQ---SKKGAVFLGVFRGKLSEGIDFGDDMARLVIVVGIPYPSLGDINVNLKR 683
Query: 653 KYNDTYRSSKN--LLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRA 710
+YN+ + + KN LSG+EWY QA RA+NQA+GR IRH DYGA +L D+R+ +
Sbjct: 684 EYNN-HENLKNSDCLSGSEWYSIQALRAVNQAVGRVIRHINDYGAFLLFDKRYSTNSVKE 742
Query: 711 HISKWLRKSIKQYDSFDASLEGLKSFFRDVKGWVGK-KMFNGLENSDNDVDHVSSMDQCK 769
+S W++KS+ D K++ +D++ + + F +++ V + K
Sbjct: 743 MLSGWMKKSLVVAD---------KNWEQDLQDFFAQFSQFPIIKHEPQQVQDIKKESVIK 793
Query: 770 EVTKQNTQELNKSDHSGQNVQSISKYDPFSHQKSQGNFEVQTSL 813
TK ++ELNK + ++ S K+ +K+ N Q S+
Sbjct: 794 CRTK--SEELNKENQVVESKMSSGKFIHIPTRKASRNMSQQYSI 835
>gi|19115889|ref|NP_594977.1| ATP-dependent DNA helicase Chl1 (predicted) [Schizosaccharomyces
pombe 972h-]
gi|74581973|sp|O14147.1|CHL1_SCHPO RecName: Full=ATP-dependent RNA helicase chl1; AltName:
Full=Chromosome loss protein 1
gi|2408082|emb|CAB16287.1| ATP-dependent DNA helicase Chl1 (predicted) [Schizosaccharomyces
pombe]
Length = 844
Score = 182 bits (462), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 183/693 (26%), Positives = 286/693 (41%), Gaps = 115/693 (16%)
Query: 125 NGQTAQVA-----MNNKNVKKKMTPTIFYASRTHSQISQVISEYKKT---AYRVPMAV-- 174
NG +++V+ ++ N K + I++ SRTHSQ+ Q++ E KK + P+ V
Sbjct: 188 NGYSSKVSELLRKLSPDNEKPPIVQKIYFTSRTHSQLQQLVQEIKKLNNQTFSTPIRVVS 247
Query: 175 LASRKHYCTNKYVRD---KENIDEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEV 231
LASRK+ C N VR ++E+C L G + CP ++ ++ + E+
Sbjct: 248 LASRKNLCINNEVRKLRPTSALNEKCIELQGSAH-KCPFLQDNTQLW---DFRDEALAEI 303
Query: 232 HDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDE 291
DIE+LV +GQ ++ C YY R D AQ+V PY ++ R A+ + +K I I+DE
Sbjct: 304 MDIEELVELGQRLKVCPYYGTREAVDSAQIVTLPYPLLLQESARNALNLTLKDNICIIDE 363
Query: 292 AHNIEDIARDAGSVDIDEDVLLKLQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATL 351
AHN+ D S I QVC + Q + + L G L
Sbjct: 364 AHNLIDAICSMHSSSIS----------FRQVCIAETQLQQYFLRFEKRLNGNNRMHIKQL 413
Query: 352 AKREFQ---HFFSCW---TGDKALR--ELQEANISRQCFPILLECATKAIKEATDTESEL 403
K + F +C T K + L +N + Q L K A +
Sbjct: 414 IKVVYNLKSFFLNCLETNTNSKVINVDSLLVSNGADQINLHHLSEYLNVSKLARKVDGYT 473
Query: 404 PHLSGMSVITLEGLFSSLTYFFSR-NGSHVSDYQLALQK------------------YIK 444
++ + LE L + FS NG Y L + Y K
Sbjct: 474 KYMHSLGTQELESLNDLRSERFSNGNGYEEDPYTPVLMQLESFLLNIANPAPEGKLFYEK 533
Query: 445 RDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCL 504
+ NP L L+P+ + + E S+ L GT+SP++ F + L + +
Sbjct: 534 QTGDNP------YLKYLLLDPSKHVEILTEQCRSVNLAGGTMSPIDDFITLLFSDEQSRI 587
Query: 505 ---EAPHVIDVDLQVLTSVISTGPDNYPLNASYKTAD----------------------- 538
H++ + + T ++S GP P ++K D
Sbjct: 588 LPFSCDHIVPPE-NITTILVSQGPAGVPFEFTHKRKDDENLLKDLGRTFQNFISIIPDGV 646
Query: 539 -----GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSK 593
+ +++ W G +RLNAKKPLF+E K + +HY S+ G
Sbjct: 647 VVFFPSFAFLQQAVKVWEMNGITNRLNAKKPLFIESKDFGDNPLD-TFEHYKQSVDAGLS 705
Query: 594 CAV--VRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLK 651
+ V R+ EG N ++K G R +VVG+PFPN D++ K
Sbjct: 706 GMLFSVIGGRLS-EGIN---------FSDKLG-------RAVMVVGMPFPNSQDVEWQAK 748
Query: 652 KKYNDTYRSSKNL---LSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERN 708
Y + K + + E+Y N RA+NQ+IGR IRHR DY +IILLD R+
Sbjct: 749 VSYVEEKAKEKGINAKQASQEFYENTCMRAVNQSIGRAIRHRDDYASIILLDSRYNRSSI 808
Query: 709 RAHISKWLRKSIKQYDSFDASLEGLKSFFRDVK 741
+ + WL K+I +F ++ L +FFR K
Sbjct: 809 QRKLPNWLSKNIHSSPNFGPAIRQLATFFRAKK 841
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 33/51 (64%), Gaps = 5/51 (9%)
Query: 28 PYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
PY PY QL FM + S++ DG + ESPTGTGKSLSL+C++L W
Sbjct: 16 PYTPYDIQLEFMRSLYSSIS----DGKI-GIFESPTGTGKSLSLICASLTW 61
>gi|195396523|ref|XP_002056881.1| GJ16649 [Drosophila virilis]
gi|229891629|sp|B4M891.1|RTEL1_DROVI RecName: Full=Regulator of telomere elongation helicase 1 homolog
gi|194146648|gb|EDW62367.1| GJ16649 [Drosophila virilis]
Length = 1005
Score = 182 bits (461), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 107/329 (32%), Positives = 159/329 (48%), Gaps = 81/329 (24%)
Query: 458 LSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQV 516
++ WC NP + + + S+ILTSGTL+P+ +EL + LE PH++D QV
Sbjct: 454 INFWCFNPGFGMEQLLNAHVRSVILTSGTLAPLKPLIAELAIPVAQHLENPHIVDRS-QV 512
Query: 517 LTSVISTGPDNYPLNASYKTAD----------------------------GYKLMEKLCN 548
+I TGPD L ++YK D Y ++ + +
Sbjct: 513 YVKIIGTGPDREQLISNYKNRDNPKYISSLGQTILNVSRIVPDGLLVFFPSYPMLNQCVD 572
Query: 549 RWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNN 608
W+ +G W+ ++ +KP+F+EP+G Q F ++ +Y +I
Sbjct: 573 AWQASGLWADISCRKPIFLEPRGKDQ--FTSTMEEFYQAIR------------------- 611
Query: 609 DLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKK 653
+ KGA F+AVCRGK I+ G+PFP + D +V LK++
Sbjct: 612 -----------DSKGACFMAVCRGKVSEGLDFADRNGRAVIITGLPFPPLKDPKVVLKRR 660
Query: 654 YNDTYRSSKN-LLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHI 712
Y +T R+ +N LLSG EWY A RA+NQAIGR IRHR DYGAI+L D RFQ+ +
Sbjct: 661 YLETNRTKENQLLSGQEWYNLDATRAVNQAIGRVIRHRNDYGAILLCDARFQDMSQVQQL 720
Query: 713 SKWLRKSI---KQYDSFDASLEGLKSFFR 738
SKW+R + Q F + L+ FF+
Sbjct: 721 SKWIRGHLGARPQSSPFGPIVRELRQFFK 749
Score = 152 bits (385), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 105/302 (34%), Positives = 156/302 (51%), Gaps = 34/302 (11%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ GI V FP++PY Q +M +VI L RDG + +LESPTGTGK+LSLLC++LAW
Sbjct: 6 IAGIPVHFPFEPYEVQRAYMEKVIMCL----RDG-TNGVLESPTGTGKTLSLLCASLAW- 59
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVK 139
I + + + L N + NN V
Sbjct: 60 -----------IRTRQSEQQQYMQKLQLDQQKQATGGAGAGVADLNAVMGKA--NNWGV- 105
Query: 140 KKMTPTIFYASRTHSQISQVISEYKKTAY-RVPMAVLASRKHYCTNKYV-RDKENIDE-- 195
P + YASRTHSQ+SQ + E K+TAY + VL SR C + V R++ N ++
Sbjct: 106 ----PKVIYASRTHSQLSQAMRELKRTAYANMKSVVLGSRDQLCIHPDVMREQGNSNKVN 161
Query: 196 ECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSM 255
CKL + + C V + HP + + DIEDLV VGQ ++ C Y+A++ +
Sbjct: 162 MCKLKVHAKT--CSFQLRVESKKDHPDFRG---PSIMDIEDLVKVGQRLKMCPYFASKEL 216
Query: 256 ADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDI-DEDVLLK 314
+ A + F PY+Y+++P R A ++++ I+ILDEAHNIE I ++ SV I DV +
Sbjct: 217 VNGADITFMPYNYLLDPKARKANKIELSNTIVILDEAHNIEKICEESASVQIRSSDVAMA 276
Query: 315 LQ 316
++
Sbjct: 277 IE 278
>gi|229891626|sp|A4K436.1|RTEL1_BOVIN RecName: Full=Regulator of telomere elongation helicase 1
gi|89887297|gb|ABD78308.1| regulator of telomere length splice variant isoform 3 [Bos taurus]
Length = 1216
Score = 181 bits (458), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 113/340 (33%), Positives = 159/340 (46%), Gaps = 83/340 (24%)
Query: 447 SKNPGGNWTHTLSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLE 505
++ PG LS WC +P +++ + ++ILTSGTL+PM SFS E+ + F CLE
Sbjct: 444 ARKPG----KVLSYWCFSPGHSMRELVRQGVRTLILTSGTLAPMASFSLEMQIPFPVCLE 499
Query: 506 APHVIDVDLQVLTSVISTGPDNYPLNASY--KTAD------------------------- 538
PHVI+ Q+ VI GPD L++++ + +D
Sbjct: 500 NPHVIN-QHQIWVGVIPKGPDGAQLSSAFDRRFSDECLSSLGKVLSNISRVVPHGLLVFF 558
Query: 539 -GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVV 597
Y +MEK WR +L +KPLFVEP+ S+ F V++ +Y ++
Sbjct: 559 PSYPVMEKSLEFWRARDFTRKLEVRKPLFVEPR--SKGGFSEVMEAFYARVA-------- 608
Query: 598 RKKRVKREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPN 642
GA FLAVCRGK IV G+P+P
Sbjct: 609 --------------------APESSGAIFLAVCRGKASEGLDFADVNGRGVIVTGLPYPP 648
Query: 643 INDIQVSLKKKYNDTYRSSKN----LLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIIL 698
D +V LK ++ D ++ LSG++WY QA RA+NQAIGR IRHR DYGA+ L
Sbjct: 649 RMDPRVLLKMQFLDEMKAQSGAGGQFLSGHDWYRQQASRAVNQAIGRVIRHRHDYGAVFL 708
Query: 699 LDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
D RF RA + W+R +K YDSF + + FFR
Sbjct: 709 CDHRFAHADTRAQLPSWVRPHVKVYDSFGHVIRDVAQFFR 748
Score = 163 bits (413), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 100/289 (34%), Positives = 153/289 (52%), Gaps = 33/289 (11%)
Query: 22 GIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQN 81
G+ V+FP+QPY Q +M +V+ L + +LESPTGTGK+L LLCSTLAW+++
Sbjct: 8 GVTVDFPFQPYKCQEEYMSKVLECLQEK-----VNGILESPTGTGKTLCLLCSTLAWREH 62
Query: 82 CKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKK 141
+ I+ LA+ G IPE +P
Sbjct: 63 LRDAVSARRIAERASGELFPDRTLASWGNAIPEGD---VPACYTD--------------- 104
Query: 142 MTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE---CK 198
P I YASRTHSQ++QVISE + T+YR + VL SR+ C + V+ +E+ + C+
Sbjct: 105 -IPKIIYASRTHSQLTQVISELRNTSYRPRVCVLGSREQLCIHPEVKKQESNHMQVHLCR 163
Query: 199 LLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADD 258
+ R+ C + NV + SL++ + DIEDLV G + C YY +R++
Sbjct: 164 RKVASRS--CHFYNNVEE----KSLEQELATPILDIEDLVRSGTKHKLCPYYLSRNLKQQ 217
Query: 259 AQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDI 307
A ++F PY+Y+++ R A +D+KG ++I DEAHN+E + +A S D+
Sbjct: 218 ADIIFMPYNYLLDAKSRRAHGIDLKGTVVIFDEAHNVEKMCEEAASFDL 266
>gi|302129716|ref|NP_001013328.2| regulator of telomere elongation helicase 1 [Danio rerio]
Length = 1177
Score = 181 bits (458), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 110/331 (33%), Positives = 150/331 (45%), Gaps = 79/331 (23%)
Query: 456 HTLSLWCLNPAVVFKDVAELSLS-IILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDL 514
+ LS WC +P +++ + IILTSGTLSP++SF+ E+ + F LE PHVI D
Sbjct: 450 NVLSYWCFSPGFSMQELLRQEVRCIILTSGTLSPLSSFTCEMQIPFPVSLENPHVIQRD- 508
Query: 515 QVLTSVISTGPDNYPLNASYKTA----------------------------DGYKLMEKL 546
Q+ S+I GPD L+ ++ Y +M+K
Sbjct: 509 QIFVSIIEKGPDGVQLSTAFDRRFVPENMSSMGNTLVNLSRVVPHGLLVFFPSYPVMDKT 568
Query: 547 CNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREG 606
WR G R+ KP+FVEP+G + F V+ YY +
Sbjct: 569 LEFWRAKGHADRIENVKPMFVEPRG--KGTFTEVIDGYYGKV------------------ 608
Query: 607 NNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLK 651
++ N G SF AVCRGK ++ G+PFP D +V LK
Sbjct: 609 ----------DDPNSSGGSFFAVCRGKASEGLDFADTYGRGVVITGLPFPPRMDPRVVLK 658
Query: 652 KKYNDTYRSSK----NLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEER 707
+Y D +K L+G EWY QA RA+NQAIGR IRHR DYGAI L D RF+
Sbjct: 659 MQYLDEMCRNKISGVKYLTGQEWYRQQASRAVNQAIGRVIRHREDYGAIFLCDHRFKSAD 718
Query: 708 NRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
R + W+R +K YD F + + FFR
Sbjct: 719 ARNQLPSWVRPYVKIYDGFGTMVRDVAQFFR 749
Score = 170 bits (431), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 104/289 (35%), Positives = 156/289 (53%), Gaps = 32/289 (11%)
Query: 22 GIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQN 81
GI V+FP+ PY Q +M +VI L + + +LESPTGTGK+L LLCSTLAW+ +
Sbjct: 8 GINVDFPFTPYPCQEDYMSKVIECLQKK-----VNGVLESPTGTGKTLCLLCSTLAWRDH 62
Query: 82 CKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKK 141
K IS K +T+ + F S +T+G T +
Sbjct: 63 FK-----DTISARK-----ITERMGGAELFADRPMSSWGTAATDGDTPTYYTD------- 105
Query: 142 MTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENID---EECK 198
P I YASRTHSQ++QV++E K T+YR + VL SR+ C N+ V E+ C+
Sbjct: 106 -IPKIIYASRTHSQLTQVVNELKNTSYRPKICVLGSREQLCINQEVMRHESNHIKVHMCR 164
Query: 199 LLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADD 258
+ R+ C + NV + S K + + D+EDLV G+ R C YY +RS+
Sbjct: 165 AKVSSRS--CIFYNNVDE----KSTDKEIVNSILDVEDLVKTGKKQRVCPYYLSRSLKQH 218
Query: 259 AQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDI 307
A ++F PY+Y+++P R A +++KGA++I DEAHN+E + ++ S D+
Sbjct: 219 ADVIFMPYNYLLDPKSRRAHNIELKGAVVIFDEAHNVEKMCEESTSFDL 267
>gi|440889948|gb|ELR44730.1| Regulator of telomere elongation helicase 1 [Bos grunniens mutus]
Length = 1264
Score = 181 bits (458), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 113/340 (33%), Positives = 159/340 (46%), Gaps = 83/340 (24%)
Query: 447 SKNPGGNWTHTLSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLE 505
++ PG LS WC +P +++ + ++ILTSGTL+PM SFS E+ + F CLE
Sbjct: 442 ARKPG----KVLSYWCFSPGHSMRELVRQGVRTLILTSGTLAPMASFSLEMQIPFPVCLE 497
Query: 506 APHVIDVDLQVLTSVISTGPDNYPLNASY--KTAD------------------------- 538
PHVI+ Q+ VI GPD L++++ + +D
Sbjct: 498 NPHVIN-QHQIWVGVIPKGPDGAQLSSAFDRRFSDECLSSLGKVLSNISRVVPHGLLVFF 556
Query: 539 -GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVV 597
Y +MEK WR +L +KPLFVEP+ S+ F V++ +Y ++
Sbjct: 557 PSYPVMEKSLEFWRARDFTRKLEVRKPLFVEPR--SKGGFSEVMEAFYARVA-------- 606
Query: 598 RKKRVKREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPN 642
GA FLAVCRGK IV G+P+P
Sbjct: 607 --------------------APESSGAIFLAVCRGKASEGLDFADVNGRGVIVTGLPYPP 646
Query: 643 INDIQVSLKKKYNDTYRSSKN----LLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIIL 698
D +V LK ++ D ++ LSG++WY QA RA+NQAIGR IRHR DYGA+ L
Sbjct: 647 RMDPRVLLKMQFLDEMKAQSGAGGQFLSGHDWYRQQASRAVNQAIGRVIRHRHDYGAVFL 706
Query: 699 LDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
D RF RA + W+R +K YDSF + + FFR
Sbjct: 707 CDHRFAHADTRAQLPSWVRPHVKVYDSFGHVIRDVAQFFR 746
Score = 125 bits (314), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 142/296 (47%), Gaps = 49/296 (16%)
Query: 22 GIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQN 81
G+ V+FP+QPY Q +M +V+ L + +LESPTGTGK+L LLCSTLAW+++
Sbjct: 8 GVTVDFPFQPYKCQEEYMSKVLECLQEK-----VNGILESPTGTGKTLCLLCSTLAWREH 62
Query: 82 CKLKNQLANISHSKPDTEAVTDPLANGG-----GFIPESQP--STIPPSTNGQTAQVAMN 134
+ I+ LA+ G G +PE+ P S +PP Q ++
Sbjct: 63 LRDAVSARRIAERASGELFPDRTLASWGNAIPEGDVPEACPHFSALPPHLPWTLTQAGLS 122
Query: 135 NKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENID 194
+ + P + VL SR+ C + V+ +E+
Sbjct: 123 RR--ESPCQPRV--------------------------CVLGSREQLCIHPEVKKQESNH 154
Query: 195 EE---CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYA 251
+ C+ + R+ C + NV + SL++ + DIEDLV G + C YY
Sbjct: 155 MQVHLCRRKVASRS--CHFYNNVEEK----SLEQELATPILDIEDLVRSGTKHKLCPYYL 208
Query: 252 ARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDI 307
+R++ A ++F PY+Y+++ R A +D+KG ++I DEAHN+E + +A S D+
Sbjct: 209 SRNLKQQADIIFMPYNYLLDAKSRRAHGIDLKGTVVIFDEAHNVEKMCEEAASFDL 264
>gi|148225626|ref|NP_001091044.1| regulator of telomere elongation helicase 1 [Bos taurus]
gi|84105070|gb|ABC54575.1| regulator of telomere length helicase 1 [Bos taurus]
gi|84105072|gb|ABC54576.1| regulator of telomere length helicase 1 [Bos taurus]
Length = 1266
Score = 181 bits (458), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 113/340 (33%), Positives = 159/340 (46%), Gaps = 83/340 (24%)
Query: 447 SKNPGGNWTHTLSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLE 505
++ PG LS WC +P +++ + ++ILTSGTL+PM SFS E+ + F CLE
Sbjct: 444 ARKPG----KVLSYWCFSPGHSMRELVRQGVRTLILTSGTLAPMASFSLEMQIPFPVCLE 499
Query: 506 APHVIDVDLQVLTSVISTGPDNYPLNASY--KTAD------------------------- 538
PHVI+ Q+ VI GPD L++++ + +D
Sbjct: 500 NPHVIN-QHQIWVGVIPKGPDGAQLSSAFDRRFSDECLSSLGKVLSNISRVVPHGLLVFF 558
Query: 539 -GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVV 597
Y +MEK WR +L +KPLFVEP+ S+ F V++ +Y ++
Sbjct: 559 PSYPVMEKSLEFWRARDFTRKLEVRKPLFVEPR--SKGGFSEVMEAFYARVA-------- 608
Query: 598 RKKRVKREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPN 642
GA FLAVCRGK IV G+P+P
Sbjct: 609 --------------------APESSGAIFLAVCRGKASEGLDFADVNGRGVIVTGLPYPP 648
Query: 643 INDIQVSLKKKYNDTYRSSKN----LLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIIL 698
D +V LK ++ D ++ LSG++WY QA RA+NQAIGR IRHR DYGA+ L
Sbjct: 649 RMDPRVLLKMQFLDEMKAQSGAGGQFLSGHDWYRQQASRAVNQAIGRVIRHRHDYGAVFL 708
Query: 699 LDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
D RF RA + W+R +K YDSF + + FFR
Sbjct: 709 CDHRFAHADTRAQLPSWVRPHVKVYDSFGHVIRDVAQFFR 748
Score = 163 bits (412), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 100/289 (34%), Positives = 153/289 (52%), Gaps = 33/289 (11%)
Query: 22 GIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQN 81
G+ V+FP+QPY Q +M +V+ L + +LESPTGTGK+L LLCSTLAW+++
Sbjct: 8 GVTVDFPFQPYKCQEEYMSKVLECLQE-----KVNGILESPTGTGKTLCLLCSTLAWREH 62
Query: 82 CKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKK 141
+ I+ LA+ G IPE +P
Sbjct: 63 LRDAVSARRIAERASGELFPDRTLASWGNAIPEGD---VPACYTD--------------- 104
Query: 142 MTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE---CK 198
P I YASRTHSQ++QVISE + T+YR + VL SR+ C + V+ +E+ + C+
Sbjct: 105 -IPKIIYASRTHSQLTQVISELRNTSYRPRVCVLGSREQLCIHPEVKKQESNHMQVHLCR 163
Query: 199 LLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADD 258
+ R+ C + NV + SL++ + DIEDLV G + C YY +R++
Sbjct: 164 RKVASRS--CHFYNNVEE----KSLEQELATPILDIEDLVRSGTKHKLCPYYLSRNLKQQ 217
Query: 259 AQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDI 307
A ++F PY+Y+++ R A +D+KG ++I DEAHN+E + +A S D+
Sbjct: 218 ADIIFMPYNYLLDAKSRRAHGIDLKGTVVIFDEAHNVEKMCEEAASFDL 266
>gi|229891620|sp|P0C928.1|RTEL1_DANRE RecName: Full=Regulator of telomere elongation helicase 1
Length = 1177
Score = 180 bits (457), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 110/331 (33%), Positives = 150/331 (45%), Gaps = 79/331 (23%)
Query: 456 HTLSLWCLNPAVVFKDVAELSLS-IILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDL 514
+ LS WC +P +++ + IILTSGTLSP++SF+ E+ + F LE PHVI D
Sbjct: 450 NVLSYWCFSPGFSMQELLRQEVRCIILTSGTLSPLSSFTCEMQIPFPVSLENPHVIQRD- 508
Query: 515 QVLTSVISTGPDNYPLNASYKTA----------------------------DGYKLMEKL 546
Q+ S+I GPD L+ ++ Y +M+K
Sbjct: 509 QIFVSIIEKGPDGVQLSTAFDRRFVPENMSSMGNTLVNLSRVVPHGLLVFFPSYPVMDKT 568
Query: 547 CNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREG 606
WR G R+ KP+FVEP+G + F V+ YY +
Sbjct: 569 LEFWRAKGHADRIENVKPMFVEPRG--KGTFTEVIDGYYGKV------------------ 608
Query: 607 NNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLK 651
++ N G SF AVCRGK ++ G+PFP D +V LK
Sbjct: 609 ----------DDPNSSGGSFFAVCRGKASEGLDFADTYGRGVVITGLPFPPRMDPRVVLK 658
Query: 652 KKYNDTYRSSK----NLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEER 707
+Y D +K L+G EWY QA RA+NQAIGR IRHR DYGAI L D RF+
Sbjct: 659 MQYLDEMCRNKISGVKYLTGQEWYRQQASRAVNQAIGRVIRHREDYGAIFLCDHRFKSAD 718
Query: 708 NRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
R + W+R +K YD F + + FFR
Sbjct: 719 ARNQLPSWVRPYVKIYDGFGTMVRDVAQFFR 749
Score = 170 bits (431), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 104/289 (35%), Positives = 156/289 (53%), Gaps = 32/289 (11%)
Query: 22 GIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQN 81
GI V+FP+ PY Q +M +VI L + + +LESPTGTGK+L LLCSTLAW+ +
Sbjct: 8 GINVDFPFTPYPCQEDYMSKVIECLQKK-----VNGVLESPTGTGKTLCLLCSTLAWRDH 62
Query: 82 CKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKK 141
K IS K +T+ + F S +T+G T +
Sbjct: 63 FK-----DTISARK-----ITERMGGAELFADRPMSSWGTAATDGDTPTYYTD------- 105
Query: 142 MTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENID---EECK 198
P I YASRTHSQ++QV++E K T+YR + VL SR+ C N+ V E+ C+
Sbjct: 106 -IPKIIYASRTHSQLTQVVNELKNTSYRPKICVLGSREQLCINQEVMRHESNHIKVHMCR 164
Query: 199 LLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADD 258
+ R+ C + NV + S K + + D+EDLV G+ R C YY +RS+
Sbjct: 165 AKVSSRS--CIFYNNVDE----KSTDKEIVNSILDVEDLVKTGKKQRVCPYYLSRSLKQH 218
Query: 259 AQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDI 307
A ++F PY+Y+++P R A +++KGA++I DEAHN+E + ++ S D+
Sbjct: 219 ADVIFMPYNYLLDPKSRRAHNIELKGAVVIFDEAHNVEKMCEESTSFDL 267
>gi|89887295|gb|ABD78307.1| regulator of telomere length splice variant isoform 2 [Bos taurus]
Length = 1237
Score = 180 bits (457), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 113/340 (33%), Positives = 159/340 (46%), Gaps = 83/340 (24%)
Query: 447 SKNPGGNWTHTLSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLE 505
++ PG LS WC +P +++ + ++ILTSGTL+PM SFS E+ + F CLE
Sbjct: 444 ARKPG----KVLSYWCFSPGHSMRELVRQGVRTLILTSGTLAPMASFSLEMQIPFPVCLE 499
Query: 506 APHVIDVDLQVLTSVISTGPDNYPLNASY--KTAD------------------------- 538
PHVI+ Q+ VI GPD L++++ + +D
Sbjct: 500 NPHVIN-QHQIWVGVIPKGPDGAQLSSAFDRRFSDECLSSLGKVLSNISRVVPHGLLVFF 558
Query: 539 -GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVV 597
Y +MEK WR +L +KPLFVEP+ S+ F V++ +Y ++
Sbjct: 559 PSYPVMEKSLEFWRARDFTRKLEVRKPLFVEPR--SKGGFSEVMEAFYARVA-------- 608
Query: 598 RKKRVKREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPN 642
GA FLAVCRGK IV G+P+P
Sbjct: 609 --------------------APESSGAIFLAVCRGKASEGLDFADVNGRGVIVTGLPYPP 648
Query: 643 INDIQVSLKKKYNDTYRSSKN----LLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIIL 698
D +V LK ++ D ++ LSG++WY QA RA+NQAIGR IRHR DYGA+ L
Sbjct: 649 RMDPRVLLKMQFLDEMKAQSGAGGQFLSGHDWYRQQASRAVNQAIGRVIRHRHDYGAVFL 708
Query: 699 LDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
D RF RA + W+R +K YDSF + + FFR
Sbjct: 709 CDHRFAHADTRAQLPSWVRPHVKVYDSFGHVIRDVAQFFR 748
Score = 163 bits (412), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 100/289 (34%), Positives = 153/289 (52%), Gaps = 33/289 (11%)
Query: 22 GIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQN 81
G+ V+FP+QPY Q +M +V+ L + +LESPTGTGK+L LLCSTLAW+++
Sbjct: 8 GVTVDFPFQPYKCQEEYMSKVLECLQEK-----VNGILESPTGTGKTLCLLCSTLAWREH 62
Query: 82 CKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKK 141
+ I+ LA+ G IPE +P
Sbjct: 63 LRDAVSARRIAERASGELFPDRTLASWGNAIPEGD---VPACYTD--------------- 104
Query: 142 MTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE---CK 198
P I YASRTHSQ++QVISE + T+YR + VL SR+ C + V+ +E+ + C+
Sbjct: 105 -IPKIIYASRTHSQLTQVISELRNTSYRPRVCVLGSREQLCIHPEVKKQESNHMQVHLCR 163
Query: 199 LLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADD 258
+ R+ C + NV + SL++ + DIEDLV G + C YY +R++
Sbjct: 164 RKVASRS--CHFYNNVEE----KSLEQELATPILDIEDLVRSGTKHKLCPYYLSRNLKQQ 217
Query: 259 AQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDI 307
A ++F PY+Y+++ R A +D+KG ++I DEAHN+E + +A S D+
Sbjct: 218 ADIIFMPYNYLLDAKSRRAHGIDLKGTVVIFDEAHNVEKMCEEAASFDL 266
>gi|89887299|gb|ABD78309.1| regulator of telomere length splice variant isoform 4 [Bos taurus]
Length = 1121
Score = 180 bits (457), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 113/340 (33%), Positives = 159/340 (46%), Gaps = 83/340 (24%)
Query: 447 SKNPGGNWTHTLSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLE 505
++ PG LS WC +P +++ + ++ILTSGTL+PM SFS E+ + F CLE
Sbjct: 444 ARKPG----KVLSYWCFSPGHSMRELVRQGVRTLILTSGTLAPMASFSLEMQIPFPVCLE 499
Query: 506 APHVIDVDLQVLTSVISTGPDNYPLNASY--KTAD------------------------- 538
PHVI+ Q+ VI GPD L++++ + +D
Sbjct: 500 NPHVIN-QHQIWVGVIPKGPDGAQLSSAFDRRFSDECLSSLGKVLSNISRVVPHGLLVFF 558
Query: 539 -GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVV 597
Y +MEK WR +L +KPLFVEP+ S+ F V++ +Y ++
Sbjct: 559 PSYPVMEKSLEFWRARDFTRKLEVRKPLFVEPR--SKGGFSEVMEAFYARVA-------- 608
Query: 598 RKKRVKREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPN 642
GA FLAVCRGK IV G+P+P
Sbjct: 609 --------------------APESSGAIFLAVCRGKASEGLDFADVNGRGVIVTGLPYPP 648
Query: 643 INDIQVSLKKKYNDTYRSSKN----LLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIIL 698
D +V LK ++ D ++ LSG++WY QA RA+NQAIGR IRHR DYGA+ L
Sbjct: 649 RMDPRVLLKMQFLDEMKAQSGAGGQFLSGHDWYRQQASRAVNQAIGRVIRHRHDYGAVFL 708
Query: 699 LDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
D RF RA + W+R +K YDSF + + FFR
Sbjct: 709 CDHRFAHADTRAQLPSWVRPHVKVYDSFGHVIRDVAQFFR 748
Score = 163 bits (413), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 100/289 (34%), Positives = 153/289 (52%), Gaps = 33/289 (11%)
Query: 22 GIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQN 81
G+ V+FP+QPY Q +M +V+ L + +LESPTGTGK+L LLCSTLAW+++
Sbjct: 8 GVTVDFPFQPYKCQEEYMSKVLECLQEK-----VNGILESPTGTGKTLCLLCSTLAWREH 62
Query: 82 CKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKK 141
+ I+ LA+ G IPE +P
Sbjct: 63 LRDAVSARRIAERASGELFPDRTLASWGNAIPEGD---VPACYTD--------------- 104
Query: 142 MTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE---CK 198
P I YASRTHSQ++QVISE + T+YR + VL SR+ C + V+ +E+ + C+
Sbjct: 105 -IPKIIYASRTHSQLTQVISELRNTSYRPRVCVLGSREQLCIHPEVKKQESNHMQVHLCR 163
Query: 199 LLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADD 258
+ R+ C + NV + SL++ + DIEDLV G + C YY +R++
Sbjct: 164 RKVASRS--CHFYNNVEE----KSLEQELATPILDIEDLVRSGTKHKLCPYYLSRNLKQQ 217
Query: 259 AQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDI 307
A ++F PY+Y+++ R A +D+KG ++I DEAHN+E + +A S D+
Sbjct: 218 ADIIFMPYNYLLDAKSRRAHGIDLKGTVVIFDEAHNVEKMCEEAASFDL 266
>gi|89887293|gb|ABD78306.1| regulator of telomere length splice variant isoform 1 [Bos taurus]
Length = 1082
Score = 180 bits (457), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 113/340 (33%), Positives = 159/340 (46%), Gaps = 83/340 (24%)
Query: 447 SKNPGGNWTHTLSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLE 505
++ PG LS WC +P +++ + ++ILTSGTL+PM SFS E+ + F CLE
Sbjct: 444 ARKPG----KVLSYWCFSPGHSMRELVRQGVRTLILTSGTLAPMASFSLEMQIPFPVCLE 499
Query: 506 APHVIDVDLQVLTSVISTGPDNYPLNASY--KTAD------------------------- 538
PHVI+ Q+ VI GPD L++++ + +D
Sbjct: 500 NPHVIN-QHQIWVGVIPKGPDGAQLSSAFDRRFSDECLSSLGKVLSNISRVVPHGLLVFF 558
Query: 539 -GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVV 597
Y +MEK WR +L +KPLFVEP+ S+ F V++ +Y ++
Sbjct: 559 PSYPVMEKSLEFWRARDFTRKLEVRKPLFVEPR--SKGGFSEVMEAFYARVA-------- 608
Query: 598 RKKRVKREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPN 642
GA FLAVCRGK IV G+P+P
Sbjct: 609 --------------------APESSGAIFLAVCRGKASEGLDFADVNGRGVIVTGLPYPP 648
Query: 643 INDIQVSLKKKYNDTYRSSKN----LLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIIL 698
D +V LK ++ D ++ LSG++WY QA RA+NQAIGR IRHR DYGA+ L
Sbjct: 649 RMDPRVLLKMQFLDEMKAQSGAGGQFLSGHDWYRQQASRAVNQAIGRVIRHRHDYGAVFL 708
Query: 699 LDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
D RF RA + W+R +K YDSF + + FFR
Sbjct: 709 CDHRFAHADTRAQLPSWVRPHVKVYDSFGHVIRDVAQFFR 748
Score = 163 bits (413), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 100/289 (34%), Positives = 153/289 (52%), Gaps = 33/289 (11%)
Query: 22 GIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQN 81
G+ V+FP+QPY Q +M +V+ L + +LESPTGTGK+L LLCSTLAW+++
Sbjct: 8 GVTVDFPFQPYKCQEEYMSKVLECLQEK-----VNGILESPTGTGKTLCLLCSTLAWREH 62
Query: 82 CKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKK 141
+ I+ LA+ G IPE +P
Sbjct: 63 LRDAVSARRIAERASGELFPDRTLASWGNAIPEGD---VPACYTD--------------- 104
Query: 142 MTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE---CK 198
P I YASRTHSQ++QVISE + T+YR + VL SR+ C + V+ +E+ + C+
Sbjct: 105 -IPKIIYASRTHSQLTQVISELRNTSYRPRVCVLGSREQLCIHPEVKKQESNHMQVHLCR 163
Query: 199 LLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADD 258
+ R+ C + NV + SL++ + DIEDLV G + C YY +R++
Sbjct: 164 RKVASRS--CHFYNNVEE----KSLEQELATPILDIEDLVRSGTKHKLCPYYLSRNLKQQ 217
Query: 259 AQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDI 307
A ++F PY+Y+++ R A +D+KG ++I DEAHN+E + +A S D+
Sbjct: 218 ADIIFMPYNYLLDAKSRRAHGIDLKGTVVIFDEAHNVEKMCEEAASFDL 266
>gi|449664763|ref|XP_002167953.2| PREDICTED: regulator of telomere elongation helicase 1-like [Hydra
magnipapillata]
Length = 1225
Score = 180 bits (457), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 133/442 (30%), Positives = 200/442 (45%), Gaps = 114/442 (25%)
Query: 455 THTLSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVD 513
TLS WC NP + K++ + + SIILTSGTLSP+ S +E + F LE HVI+
Sbjct: 476 ARTLSYWCFNPGLTMKELRDQGVRSIILTSGTLSPLASLKAEFLIPFDVELENGHVIEKQ 535
Query: 514 LQVLTSVISTGPDNYPLNASYKT---------------------ADG-------YKLMEK 545
QV ++ GPD LN+SY++ DG Y +M+
Sbjct: 536 -QVFVGILPQGPDGKKLNSSYQSRSTSEYQVSLGNTIVNLSRIIPDGLLVFFPSYPVMDM 594
Query: 546 LCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKRE 605
+ +W+E G W+R+ K L+VE +G + F + +Y I
Sbjct: 595 VLAKWQECGIWNRIATNKGLYVEGRG--KLGFNETIDEFYLKI----------------- 635
Query: 606 GNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSL 650
+ KGA F AVCRGK ++ G+PFP D +V L
Sbjct: 636 -----------HDPALKGAVFFAVCRGKVSEGLDFSDANGRGVVITGLPFPPSFDPRVIL 684
Query: 651 KKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRA 710
K++Y D ++S+ +SG EWY QA RA+NQAIGR IRH+ D+GAI+L DERF + +
Sbjct: 685 KQQYLDEHKSNVT-ISGKEWYRQQASRAVNQAIGRVIRHKNDFGAILLCDERFCQPSAKE 743
Query: 711 HISKWLRKSIKQYDSFDASLEGLKSFFRDVKGWVGKKMFNGLENSDNDVDHVSSMDQCKE 770
H+ W+++ K+Y F + L FFR+++ +G + + +CK
Sbjct: 744 HLPSWIKQQTKEYKDFGQAQRDLVIFFRNIQEKMG-----------------TVLTKCKS 786
Query: 771 VTKQNTQELNKSDHSGQNVQSISKYDPFSHQKSQGNFEVQTSLQTDQNNSCIEYIDLERM 830
K E N S H V + SK +H + +F QN +C
Sbjct: 787 KRKVEVYE-NPSSHL---VNAKSKSIKLTHISQRDDF---------QNTTC--------F 825
Query: 831 NDKNNHSIDSSKGSTRKENKKL 852
N++N+ I ++K S E+ L
Sbjct: 826 NERNDSRISAAKSSVPSESLAL 847
Score = 153 bits (387), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 95/291 (32%), Positives = 153/291 (52%), Gaps = 29/291 (9%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ G+ ++FP++PY Q+ +M +VI+ L + + LLESPTGTGK+L LLC+TL W+
Sbjct: 6 ICGVNIDFPFEPYECQIKYMEKVITCLQKG-----LNGLLESPTGTGKTLCLLCATLGWR 60
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVK 139
+ + QL + K A +D L ST+ ++ + A + +
Sbjct: 61 ETYVARLQLERVG--KLQQNAFSDSLG-----------STLGEASGEKNAGGSWERGFLD 107
Query: 140 KKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE--- 196
P I YASRTHSQI+Q ++E K T Y + VL SR+ C N V +EN + +
Sbjct: 108 ---VPKIIYASRTHSQITQCVNELKNTRYVPKICVLGSREQMCINSEVMREENNNGKVHM 164
Query: 197 CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMA 256
C++ + + C + N+ + G + DIEDLV++G + C YY AR +
Sbjct: 165 CRIKVAGKQ--CFFYNNLEERSEDKDKVPPG---MLDIEDLVSIGTEKKFCPYYMARELR 219
Query: 257 DDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDI 307
+A L+F PY+Y+++ R VD+ I++LDEAHN+E + S ++
Sbjct: 220 KEADLLFMPYNYVLDFKARNVHGVDLTNTIVLLDEAHNLESHCENNASFEL 270
>gi|426347251|ref|XP_004041270.1| PREDICTED: Fanconi anemia group J protein-like, partial [Gorilla
gorilla gorilla]
Length = 491
Score = 179 bits (455), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 102/300 (34%), Positives = 167/300 (55%), Gaps = 13/300 (4%)
Query: 98 TEAVTDPLANGGGFIPESQP---STIPPST---NGQTAQVAMNNKNVKKKMTPTIFYASR 151
T + PL F P+ P S ST N Q + + + K P I++ +R
Sbjct: 192 TVKLNSPLERINSFSPQKPPGHCSRCCCSTKQGNSQESSNTIKKDHTGKSKIPKIYFGTR 251
Query: 152 THSQISQVISEYKKTAYR-VPMAVLASRKHYCTNKYVRDKENIDEEC-KLLLGDRNLGCP 209
TH QI+Q+ E ++TAY VPM +L+SR H C + V N +E+C +LL G C
Sbjct: 252 THKQIAQITRELRRTAYSGVPMTILSSRDHTCVHPEVVGNFNRNEKCMELLDGKNGKSCY 311
Query: 210 QFKNVHKVRGHPSLQ--KGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYS 267
+ VHK+ +LQ +G C + DIE+LV++G+ ++ C YY AR + DA ++FCPY+
Sbjct: 312 FYHGVHKISDQHTLQTFQGMC-KAWDIEELVSLGKKLKACPYYTARELIQDADIIFCPYN 370
Query: 268 YIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQVC--SV 325
Y+++ IR +M++++K ++ILDEAHNIED AR++ S + E L + EL+ + ++
Sbjct: 371 YLLDAQIRESMDLNLKEQVVILDEAHNIEDCARESASYSVTEVQLRFARDELDSMVNNNI 430
Query: 326 NPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRELQEANISRQCFPIL 385
++PL + L+ W+E L +R+++ W+G++ L L + I+ FPIL
Sbjct: 431 RKKDHEPLRAVCCSLINWLEANAEYLVERDYESACKIWSGNEMLLTLHKMGITTATFPIL 490
Score = 71.2 bits (173), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 44/64 (68%), Gaps = 5/64 (7%)
Query: 18 YHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLA 77
Y +GG+++ FP + Y SQL M ++ L+ Q H LLESPTG+GKSL+LLCS LA
Sbjct: 8 YTIGGVKIYFPCKAYPSQLAMMNSILRGLNSKQ-----HCLLESPTGSGKSLALLCSALA 62
Query: 78 WQQN 81
WQQ+
Sbjct: 63 WQQS 66
>gi|194888991|ref|XP_001977003.1| GG18780 [Drosophila erecta]
gi|229891622|sp|B3NSW1.1|RTEL1_DROER RecName: Full=Regulator of telomere elongation helicase 1 homolog
gi|190648652|gb|EDV45930.1| GG18780 [Drosophila erecta]
Length = 985
Score = 179 bits (455), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 109/333 (32%), Positives = 162/333 (48%), Gaps = 81/333 (24%)
Query: 458 LSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQV 516
++ WC NP + + + S+ILTSGTL+P+ +EL + LE PH++D QV
Sbjct: 454 INFWCFNPGFGMEQLLNTQVRSVILTSGTLAPLKPLIAELAIPVAQHLENPHIVDQS-QV 512
Query: 517 LTSVISTGPD------NYP---------------LNASYKTADG-------YKLMEKLCN 548
+I TGPD NY LN S DG Y ++ K +
Sbjct: 513 YVKIIGTGPDRQQLISNYANRDNPKYISSLGQTILNVSRIVPDGLLVFFPSYPMLNKCVD 572
Query: 549 RWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNN 608
W+ +G W+ ++ KKP+F+EP+ S++ F ++ +Y +I
Sbjct: 573 AWQASGLWADISCKKPIFLEPR--SKDQFTSTMEEFYQAIR------------------- 611
Query: 609 DLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKK 653
+ KGA F+AVCRGK I+ G+PFP + D +V LK++
Sbjct: 612 -----------DSKGAVFMAVCRGKVSEGLDFADRNGRAVIITGLPFPPLKDPKVILKRR 660
Query: 654 YNDTYRSSKN-LLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHI 712
Y + R+ +N LLSG EWY A RA+NQAIGR IRHR DYGAI+L D RF++ +
Sbjct: 661 YLEANRTRENQLLSGQEWYNLDATRAVNQAIGRVIRHRNDYGAILLCDSRFKDASQVQQL 720
Query: 713 SKWLRKSI---KQYDSFDASLEGLKSFFRDVKG 742
SKW+R + Q F + L+ FF++ +
Sbjct: 721 SKWIRGHLGDRPQCSPFGPIVRELRQFFKNAEA 753
Score = 171 bits (434), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 109/302 (36%), Positives = 163/302 (53%), Gaps = 33/302 (10%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ GI V FP++PY Q +M +VI L RDG + +LESPTGTGK+LSLLCS+LAW
Sbjct: 6 IAGIPVHFPFEPYPVQRAYMEKVIQCL----RDG-TNGVLESPTGTGKTLSLLCSSLAWI 60
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVK 139
+ + ++Q + K D LA G +T G+ + +
Sbjct: 61 RTRQSEHQQQMVKIEKADFSG----LAGG--------------ATGGELSDLGKTMGRAN 102
Query: 140 KKMTPTIFYASRTHSQISQVISEYKKTAY-RVPMAVLASRKHYCTNKYV-RDKENIDEE- 196
P + YASRTHSQ++Q + E K+TAY + VL SR C + V R++ N ++
Sbjct: 103 NWGVPKVIYASRTHSQLTQAMRELKRTAYANMRSVVLGSRDQLCIHPEVMREQGNSNKTN 162
Query: 197 -CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSM 255
CKL + + C V + HP L+ + DIEDLV VGQ ++ C Y+A+R +
Sbjct: 163 MCKLRVHSKT--CTFQMRVESRKDHPDLRG---PSIMDIEDLVKVGQRLKICPYFASREL 217
Query: 256 ADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDI-DEDVLLK 314
A + F PY+Y+++P R A ++++ I+ILDEAHNIE I ++ SV I DV +
Sbjct: 218 VPQADITFMPYNYLLDPKARKANKIELGNTIVILDEAHNIEKICEESASVQIKSSDVAMA 277
Query: 315 LQ 316
++
Sbjct: 278 IE 279
>gi|431894622|gb|ELK04422.1| Regulator of telomere elongation helicase 1 [Pteropus alecto]
Length = 1198
Score = 179 bits (454), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 114/340 (33%), Positives = 162/340 (47%), Gaps = 83/340 (24%)
Query: 447 SKNPGGNWTHTLSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLE 505
+K PG LS WC +P +++ + ++ILTSGTL+P++SF+ E+ + F LE
Sbjct: 457 AKKPG----KVLSYWCFSPGYSMRELVRQGVRTLILTSGTLAPVSSFALEMQIPFPVSLE 512
Query: 506 APHVIDVDLQVLTSVISTGPDNYPLNASY--KTAD------------------------- 538
PHVID Q+ ++ GPD L++++ + +D
Sbjct: 513 NPHVIDKH-QIWVGIVPKGPDGTQLSSAFDKRFSDECLSSLGKALGNIARVVPHGLLVFF 571
Query: 539 -GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVV 597
Y +MEK WR S+L A KPLFVEP+ S+ F V+ YY S
Sbjct: 572 PSYPVMEKSLEFWRARDFASKLEALKPLFVEPR--SKAGFSEVIGAYYTS---------- 619
Query: 598 RKKRVKREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPN 642
V R G+ +GA+FLAVCRGK +V G+P+P
Sbjct: 620 ----VIRPGS--------------RGAAFLAVCRGKASEGLDFADMNGRGVVVTGLPYPP 661
Query: 643 INDIQVSLKKKYNDTYR----SSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIIL 698
D +V LK ++ D + + LSG +WY QA RA+NQAIGR IRHR DYG ++L
Sbjct: 662 RKDPRVILKMQFLDEMKGRSEAKGQFLSGQDWYRQQASRAVNQAIGRVIRHRHDYGVVLL 721
Query: 699 LDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
D RF RA + W+R +K YD F + + FFR
Sbjct: 722 CDHRFACADARAQLPSWVRPHVKVYDHFGHVIRDVAQFFR 761
Score = 157 bits (396), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 98/283 (34%), Positives = 155/283 (54%), Gaps = 33/283 (11%)
Query: 22 GIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQN 81
G+ V+FP+QPY Q +M +V+ L + + +LESPTGTGK+L LLC+TLAW+++
Sbjct: 8 GVTVDFPFQPYKCQEEYMAKVLECLQK-----KVNGVLESPTGTGKTLCLLCTTLAWREH 62
Query: 82 CKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKK 141
L++ L+ +H + G P+ S+ + + + A +
Sbjct: 63 --LRDALS--AHKIAERAQ--------GELFPDRPLSSWGSAASDRDAPACYAD------ 104
Query: 142 MTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE---CK 198
P + YASRTHSQ++QVISE + TAYR + VL SR+ C + V+ +E+ + C+
Sbjct: 105 -IPKVIYASRTHSQLTQVISELRNTAYRPRVCVLGSREQLCIHPEVKKQESSHMQIHLCR 163
Query: 199 LLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADD 258
+ R+ C + NV + SL++ + DIEDLV G R C YY AR++
Sbjct: 164 KKVASRS--CHFYNNVEEK----SLEQELATPILDIEDLVKSGNKHRLCPYYLARNLKQQ 217
Query: 259 AQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARD 301
A +VF PY+Y+++ R A +D+KG ++I DEAHN+ R+
Sbjct: 218 ADIVFMPYNYLLDAKSRRAHSIDLKGTVVIFDEAHNVPPAPRN 260
>gi|307202440|gb|EFN81860.1| Fanconi anemia group J protein [Harpegnathos saltator]
Length = 293
Score = 179 bits (454), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 110/308 (35%), Positives = 162/308 (52%), Gaps = 70/308 (22%)
Query: 457 TLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQV 516
TL L C+NPAVVF+ ++ ++ S+IL SGTL+P +SF SELG +F L A H+I + QV
Sbjct: 1 TLKLVCMNPAVVFEPLSRITRSVILASGTLAPTSSFESELGTRFPHKLHANHIIPRE-QV 59
Query: 517 LTSVISTGPDNYPLNASYKTADGY-------KLMEKLCN--------------------- 548
I GP+ L A+YK + + KL+ ++C+
Sbjct: 60 YVRCIPRGPNGESLLANYKNVNSWSFQDELGKLIVQVCDAIPYGVLCFFSSYSAMNKIHM 119
Query: 549 RWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNN 608
RW++ G W++L K +FVEPK + +++ Y I + S
Sbjct: 120 RWKDIGIWAKLAELKEIFVEPK--ENRELPEIMREYREVIKESS---------------- 161
Query: 609 DLNTIESQENANKKGASFLAVCRGKIV---------------VGIPFPNINDIQVSLKKK 653
S+ + GA AV RGK+ VGIPF +I ++ V++KK
Sbjct: 162 ------SKSFRERSGAILFAVFRGKVAEGIDFSDNEARCVLTVGIPFTSIKNVAVAMKKD 215
Query: 654 YNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERF-QEERNRAHI 712
YND+ SK LLSG+EWY AFRALNQA+GRCIRH D+GA++L+DERF Q +N ++
Sbjct: 216 YNDS-NMSKGLLSGSEWYTINAFRALNQALGRCIRHINDWGAVLLVDERFLQRPKNADYL 274
Query: 713 SKWLRKSI 720
KW+++ +
Sbjct: 275 PKWIKEMV 282
>gi|392577022|gb|EIW70152.1| hypothetical protein TREMEDRAFT_29466 [Tremella mesenterica DSM
1558]
Length = 840
Score = 179 bits (453), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 184/703 (26%), Positives = 287/703 (40%), Gaps = 167/703 (23%)
Query: 146 IFYASRTHSQISQVISEYKKTAYRVP----------------MAVLASRKHYCTNKYVR- 188
I++ASRTH+Q+ Q+ SE KT + VP M L SRK C N VR
Sbjct: 185 IYFASRTHTQLRQLTSELLKTTF-VPSSSDTPDSEGDTHGISMVPLGSRKQLCINDKVRA 243
Query: 189 -----DKENIDEECKLLLGDRNLGC---PQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNV 240
E ++E C L ++ C P+ ++V + ++ EV DIED+V +
Sbjct: 244 LARNGGDERMNEAC--LDMQKSSECEFLPKSEDVAMLDARDAV----LAEVRDIEDIVQM 297
Query: 241 GQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIAR 300
G+ C YY+ R AQLV PY+ ++ R A+++D+KG ++++DEAHN+ D
Sbjct: 298 GRKCGVCPYYSTRRAVKQAQLVTLPYNLLLQKNAREALDIDLKGQVVVIDEAHNLIDTIL 357
Query: 301 DAGSVDIDEDVLLKLQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLA-------- 352
S + L +L+Q S +P+ + WI + + L
Sbjct: 358 SIHSTTLTHHHLTSAISQLQQYLSRFKTRLKPIHTL------WIRQTLSVLTGLSKVCLS 411
Query: 353 -------------------KREFQHFFSCWTGDK-------ALRELQEANISRQC--FPI 384
+ F + G +R L+E+ ++R+ F
Sbjct: 412 FSTATPSSSNSSQNKSRSEMMDVNTFMARAGGSTDQVNLMDLVRYLKESKLARKVSGFAE 471
Query: 385 LLECATKAIKEATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIK 444
+E A+K + ++ H + + +E SLT D ++ L
Sbjct: 472 KVEEASKKRNKGERSDVRTRHAAIAAFHLVESFLLSLT-------DAKDDGRVILS---- 520
Query: 445 RDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGT-- 502
+ GG L LNPA F++V E + S++L GT+ P+N F +L F T
Sbjct: 521 ----DEGGKL--ELRYILLNPAERFREVVEQARSVVLAGGTMEPINDFLRQL-FPFVTPS 573
Query: 503 ---CLEAPHVIDVDLQVLTSVISTGPDNYPLNASYK---------------------TAD 538
L HVI +LT V+S GP L Y D
Sbjct: 574 RIITLSCSHVIPKS-NLLTQVVSCGPRKIELEFKYSNRSDDSLLAELGSVILSTVGLVPD 632
Query: 539 G-------YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQG 591
G Y ++K+ + W T +L KK +F EP+ + + E VL+ Y +IS
Sbjct: 633 GIVVFLPSYSFLDKIKHTW--TAVLPKLAEKKHVFYEPQ--TSGEVETVLRDYSLAISTV 688
Query: 592 SKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVV 636
S + K +KGA AV GK I+V
Sbjct: 689 SPPGIGDK---------------------RKGALLFAVVGGKLSEGINFSDRLGRCVIMV 727
Query: 637 GIPFPNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAI 696
G+PF NI +++S + KY + S E Y N RA+NQ+IGR IRH DY I
Sbjct: 728 GLPFANIASVELSERMKYVSGLPGAGPDAS-KELYENLCMRAVNQSIGRAIRHANDYACI 786
Query: 697 ILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFRD 739
+L+D+R+ +R R + KW+R+ ++ + GL FFR+
Sbjct: 787 LLVDKRYASQRIRRKLPKWIREDVQVPPDWAGVARGLAGFFRE 829
>gi|24639946|ref|NP_572254.1| CG4078, isoform A [Drosophila melanogaster]
gi|442615242|ref|NP_001259262.1| CG4078, isoform B [Drosophila melanogaster]
gi|75027961|sp|Q9W484.1|RTEL1_DROME RecName: Full=Regulator of telomere elongation helicase 1 homolog
gi|7290625|gb|AAF46074.1| CG4078, isoform A [Drosophila melanogaster]
gi|60677863|gb|AAX33438.1| RE31401p [Drosophila melanogaster]
gi|220952186|gb|ACL88636.1| CG4078-PA [synthetic construct]
gi|440216460|gb|AGB95108.1| CG4078, isoform B [Drosophila melanogaster]
Length = 985
Score = 178 bits (452), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 108/333 (32%), Positives = 162/333 (48%), Gaps = 81/333 (24%)
Query: 458 LSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQV 516
++ WC NP + + + S+ILTSGTL+P+ +EL + LE PH++D QV
Sbjct: 454 INFWCFNPGFGMEQLLNTQVRSVILTSGTLAPLKPLIAELAIPVAQHLENPHIVDQS-QV 512
Query: 517 LTSVISTGPD------NYP---------------LNASYKTADG-------YKLMEKLCN 548
+I TGPD NY LN + DG Y ++ K +
Sbjct: 513 YVKIIGTGPDRQQLISNYANRDNPKYISSLGQTILNVARIVPDGLLVFFPSYPMLNKCVD 572
Query: 549 RWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNN 608
W+ +G W+ ++ KKP+F+EP+ S++ F ++ +Y +I
Sbjct: 573 AWQASGLWADISCKKPIFLEPR--SKDQFTSTMEEFYQAIR------------------- 611
Query: 609 DLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKK 653
+ KGA F+AVCRGK I+ G+PFP + D +V LK++
Sbjct: 612 -----------DSKGAVFMAVCRGKVSEGLDFADRNGRAVIITGLPFPPLKDPKVILKRR 660
Query: 654 YNDTYRSSKN-LLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHI 712
Y + R+ +N LLSG EWY A RA+NQAIGR IRHR DYGAI+L D RF++ +
Sbjct: 661 YLEANRTRENQLLSGQEWYNLDATRAVNQAIGRVIRHRNDYGAILLCDSRFKDASQVQQL 720
Query: 713 SKWLRKSI---KQYDSFDASLEGLKSFFRDVKG 742
SKW+R + Q F + L+ FF++ +
Sbjct: 721 SKWIRGHLGDRPQCSPFGPIVRELRQFFKNAEA 753
Score = 163 bits (412), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 106/302 (35%), Positives = 161/302 (53%), Gaps = 33/302 (10%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ GI V FP++PY Q +M +VI L RDG + +LESPTGTGK+LSLLCS+LAW
Sbjct: 6 IAGIPVHFPFEPYPVQRAYMEKVIHCL----RDG-TNGVLESPTGTGKTLSLLCSSLAWI 60
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVK 139
+ + ++Q + K D + + G +++A
Sbjct: 61 RTRQSEHQKQMVKMEKADFSGLGGG------------------APGGDLSELAKTMGRAN 102
Query: 140 KKMTPTIFYASRTHSQISQVISEYKKTAY-RVPMAVLASRKHYCTNKYV-RDKENIDEE- 196
P + YASRTHSQ++Q + E K+TAY + VL SR C + V R++ N ++
Sbjct: 103 NWGVPKVIYASRTHSQLTQAMRELKRTAYANMRSVVLGSRDQLCIHPEVMREQGNSNKTN 162
Query: 197 -CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSM 255
CKL + + C V + HP L+ + DIEDLV VGQ ++ C Y+A+R +
Sbjct: 163 MCKLRVHSKT--CSFQMRVESRKDHPDLRG---PTIMDIEDLVKVGQRLKICPYFASREL 217
Query: 256 ADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDI-DEDVLLK 314
A + F PY+Y+++P R A ++++ I+ILDEAHNIE I ++ SV I DV +
Sbjct: 218 VPQADITFMPYNYLLDPKARKANKIELGNTIVILDEAHNIEKICEESASVQIKSSDVAMA 277
Query: 315 LQ 316
++
Sbjct: 278 IE 279
>gi|195340550|ref|XP_002036876.1| GM12432 [Drosophila sechellia]
gi|229891628|sp|B4I0K4.1|RTEL1_DROSE RecName: Full=Regulator of telomere elongation helicase 1 homolog
gi|194130992|gb|EDW53035.1| GM12432 [Drosophila sechellia]
Length = 966
Score = 178 bits (452), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 108/333 (32%), Positives = 162/333 (48%), Gaps = 81/333 (24%)
Query: 458 LSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQV 516
++ WC NP + + + S+ILTSGTL+P+ +EL + LE PH++D QV
Sbjct: 435 INFWCFNPGFGMEQLLNTQVRSVILTSGTLAPLKPLIAELAIPVAQHLENPHIVDQS-QV 493
Query: 517 LTSVISTGPD------NYP---------------LNASYKTADG-------YKLMEKLCN 548
+I TGPD NY LN + DG Y ++ K +
Sbjct: 494 YVKIIGTGPDRQQLISNYANRDNPKYVSSLGQTILNVARIVPDGLLVFFPSYPMLNKCVD 553
Query: 549 RWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNN 608
W+ +G W+ ++ KKP+F+EP+ S++ F ++ +Y +I
Sbjct: 554 AWQASGLWADISCKKPIFLEPR--SKDQFTSTMEEFYQAIR------------------- 592
Query: 609 DLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKK 653
+ KGA F+AVCRGK I+ G+PFP + D +V LK++
Sbjct: 593 -----------DSKGAVFMAVCRGKVSEGLDFADRNGRAVIITGLPFPPLKDPKVILKRR 641
Query: 654 YNDTYRSSKN-LLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHI 712
Y + R+ +N LLSG EWY A RA+NQAIGR IRHR DYGAI+L D RF++ +
Sbjct: 642 YLEANRTRENQLLSGQEWYNLDATRAVNQAIGRVIRHRNDYGAILLCDSRFKDASQVQQL 701
Query: 713 SKWLRKSI---KQYDSFDASLEGLKSFFRDVKG 742
SKW+R + Q F + L+ FF++ +
Sbjct: 702 SKWIRGHLGDRPQCSPFGPIVRELRQFFKNAEA 734
Score = 135 bits (339), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/302 (32%), Positives = 146/302 (48%), Gaps = 52/302 (17%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ GI V FP++PY Q +M +VI L RDG + +LESPTGTGK+LSLLCS+LAW
Sbjct: 6 IAGIPVHFPFEPYPVQRAYMEKVIHCL----RDG-TNGVLESPTGTGKTLSLLCSSLAWI 60
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVK 139
+ + ++Q+ + K D + + G +++A
Sbjct: 61 RTRQSEHQMQMVKMEKADFSGIGG------------------GAPGGDLSELAKTMGRAN 102
Query: 140 KKMTPTIFYASRTHSQISQVISEYKKTAY-RVPMAVLASRKHYCTNKYVRDK---ENIDE 195
P + YASRTHSQ++Q + E K+TAY + VL SR C + V + N
Sbjct: 103 NWGVPKVIYASRTHSQLTQAMRELKRTAYANMRSVVLGSRDQLCIHPEVMRELGNSNKTN 162
Query: 196 ECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSM 255
CKL + + C V + HP L+ + DIEDLV VGQ ++ C Y+A+R +
Sbjct: 163 MCKLRVHSKT--CSFQMRVESRKDHPDLRG---PTIMDIEDLVKVGQRLKICPYFASREL 217
Query: 256 ADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDI-DEDVLLK 314
A A ++++ I+ILDEAHNIE I + SV I DV +
Sbjct: 218 AR-------------------ANKIELGNTIVILDEAHNIEKICEEYASVQIKSSDVAMT 258
Query: 315 LQ 316
++
Sbjct: 259 IE 260
>gi|297259357|ref|XP_001113864.2| PREDICTED: regulator of telomere elongation helicase 1-like [Macaca
mulatta]
Length = 1347
Score = 177 bits (449), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 110/330 (33%), Positives = 153/330 (46%), Gaps = 79/330 (23%)
Query: 457 TLSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQ 515
LS WC +P +++ + S+ILTSGTL+P++SF+ E+ + F CLE PH+ID Q
Sbjct: 498 VLSYWCFSPGHSMRELVRQGVRSLILTSGTLAPVSSFALEMQIPFPVCLENPHIIDKH-Q 556
Query: 516 VLTSVISTGPDNYPLNASYKTA----------------------------DGYKLMEKLC 547
+ V+ GPD L++++ Y +MEK
Sbjct: 557 IWVGVVPRGPDGAQLSSAFDRRFSEECLSSLGKALGNIARVVPYGLLIFFPSYPVMEKSL 616
Query: 548 NRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGN 607
WR ++ A KPLFVEP+ S+ F + YY RV G+
Sbjct: 617 EFWRARDLARKMEALKPLFVEPR--SKGSFSETISAYY--------------ARVAAPGS 660
Query: 608 NDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKK 652
GA+FLAVCRGK IV G+P+P D +V LK
Sbjct: 661 T--------------GATFLAVCRGKASEGLDFSDTNGRGVIVTGLPYPPRMDPRVVLKM 706
Query: 653 KYNDTYR----SSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERN 708
++ D + + LSG EWY QA RA+NQAIGR IRHR DYGA+ L D RF
Sbjct: 707 QFLDEMKGQGGAGGQFLSGQEWYRQQASRAVNQAIGRVIRHRQDYGAVFLCDHRFAFADA 766
Query: 709 RAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
RA + W+R ++ YD+F + + FFR
Sbjct: 767 RAQLPSWVRPHVRVYDNFGHVIRDVAQFFR 796
Score = 154 bits (390), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 96/289 (33%), Positives = 154/289 (53%), Gaps = 32/289 (11%)
Query: 22 GIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQN 81
G+ ++FP+QPY Q +M +V+ L + + +LESPTGTGK+L LLC+TLAW+++
Sbjct: 8 GVTIDFPFQPYKCQQEYMTKVLECLQQ-----KVNGILESPTGTGKTLCLLCTTLAWREH 62
Query: 82 CKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKK 141
L + ++ E V G P S+ + +A
Sbjct: 63 ------LRDTISARKIAERVQ------GELFPNQALSSWGNAAAAAEDPIACYTD----- 105
Query: 142 MTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE---CK 198
P I YASRTHSQ++QVI+E + T+YR + VL SR+ C + V+ +E+ + C+
Sbjct: 106 -IPKIIYASRTHSQLTQVINELRNTSYRPKVCVLGSREQLCIHPEVKKQESNHMQIHLCR 164
Query: 199 LLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADD 258
+ R+ C + NV + L++ + DIEDLV G R C YY +R++
Sbjct: 165 KKVASRS--CHFYNNVEEK----GLEQELASPILDIEDLVKSGSKHRVCPYYLSRNLKQQ 218
Query: 259 AQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDI 307
A +VF PY+Y+++ R A +D+KG ++I DEAHN+E + ++ S D+
Sbjct: 219 ADIVFMPYNYLLDAKSRRAHSIDLKGTVVIFDEAHNVEKMCEESASFDL 267
>gi|167999293|ref|XP_001752352.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696747|gb|EDQ83085.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 765
Score = 177 bits (449), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 120/344 (34%), Positives = 170/344 (49%), Gaps = 35/344 (10%)
Query: 424 FFSRNGSHVSDYQLALQKYIKRDSKNPGGNWT-HTLSLWCLNPAVVFKDVAELSL-SIIL 481
F N SH Y++ L I+ GN LS WC NP + ++ +++ + S+IL
Sbjct: 390 FRDNNVSHAGSYKVTL---IRSPGLFTAGNKKGRMLSWWCFNPGLAMEEFSKMGVRSVIL 446
Query: 482 TSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTADGYK 541
TSGTL+P+ SF+ EL + F LE PHVID QV V+S GP PLN+SY++ D +
Sbjct: 447 TSGTLAPLESFAIELNLAFDVRLENPHVIDAS-QVWVGVVSNGPSGRPLNSSYRSRDSIE 505
Query: 542 LMEKLCNRWRETGQWSRLNAKKPLFVEPK----GGSQEDFEIVLKHYYNSISQG---SKC 594
+L N ++R+ L P E ++ V ++ + +K
Sbjct: 506 YKLELGN---TIVNFARIVPDGVLVFFPSYYLLNSCIEAWQTVTSGPAATVWERICRNKQ 562
Query: 595 AVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKI---------------VVGIP 639
VV K + + + + GA F AVCRGK+ V GIP
Sbjct: 563 PVVEPKESALFNQANEDFVAKINDPTSTGAIFFAVCRGKVSEGLDFADRSGRAVVVTGIP 622
Query: 640 FPNINDIQVSLKKKYNDTYRSSK----NLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGA 695
F D +V LK+++ D S+ +L+G EWY QA RA+NQA+GR IRHR DYGA
Sbjct: 623 FAMKMDPKVRLKREFLDEQARSRITKHKVLTGEEWYVQQASRAVNQAVGRVIRHRNDYGA 682
Query: 696 IILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFRD 739
IIL DERF + ++ +S WLR IK Y F + L FF+D
Sbjct: 683 IILCDERFGQSGPQSQMSLWLRPYIKTYHKFGDAAFSLTRFFKD 726
Score = 166 bits (420), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 109/304 (35%), Positives = 155/304 (50%), Gaps = 51/304 (16%)
Query: 15 LNAYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCS 74
+ Y V GI V+FPY Y QLV+M RVIS+L + + +ALLESPTGTGK+L LLC+
Sbjct: 1 MPTYKVAGISVQFPYDAYDCQLVYMERVISSLQQGR-----NALLESPTGTGKTLCLLCA 55
Query: 75 TLAWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAM- 133
TLAW+++ IP Q S Q++Q +
Sbjct: 56 TLAWRES-----------------------------LIPLQQTSQSSQRVTSQSSQRGLM 86
Query: 134 -----NNKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVP-MAVLASRKHYCTNKYV 187
+++ + PTI Y+SRTHSQ+ QVI E K T Y P M VL SR+ C ++ V
Sbjct: 87 SLSQNDSEEALQPKLPTIVYSSRTHSQLQQVIRELKATVYSRPKMVVLGSREQMCIHREV 146
Query: 188 RDKENI--DEECKLLLGDRNLGCPQFKNVHK-VRGHPSLQKGGCHEVHDIEDLVNVGQVV 244
++ + C+ L RN C + V + HP L + E DIEDLV +G+
Sbjct: 147 QNLRGRAQNHACRSLTKGRN--CKHYNGVADYAKNHPQLGE----EPIDIEDLVKIGKTE 200
Query: 245 RGCSYYAARSMADDAQLVFCPYSYIINPVIRGAME-VDIKGAILILDEAHNIEDIARDAG 303
C Y+ +R + + A ++F PY+Y+I +R ++ V ILI DEAHN+ I DA
Sbjct: 201 GPCPYFLSRELHNSADILFVPYNYLIEKEMRRSLTGVSWGRTILIFDEAHNLARICADAA 260
Query: 304 SVDI 307
S D+
Sbjct: 261 SFDL 264
>gi|338719447|ref|XP_001492963.3| PREDICTED: regulator of telomere elongation helicase 1-like [Equus
caballus]
Length = 1344
Score = 177 bits (448), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 114/332 (34%), Positives = 154/332 (46%), Gaps = 83/332 (25%)
Query: 457 TLSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQ 515
LS WC +P +++ + ++ILTSGTL+P++SF+ E+ + F CLE PHVID Q
Sbjct: 453 VLSYWCFSPGHSMRELVRQGVRTLILTSGTLAPVSSFALEMQIPFPVCLENPHVIDKH-Q 511
Query: 516 VLTSVISTGPDNYPLN------------ASYKTADG----------------YKLMEKLC 547
+ V+ GPD L+ AS A G Y +MEK
Sbjct: 512 IWVGVVPKGPDGAQLSSAFDKRFSDTCLASLGKALGNIARVVPHGLLVFFPSYPVMEKSL 571
Query: 548 NRWRETGQWSRLNAKKPLFVEP--KGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKRE 605
WR +L A KP+FVEP KGG E V+ YY++++
Sbjct: 572 EFWRAQDFARKLEALKPVFVEPRSKGGLSE----VMDAYYSTVA---------------- 611
Query: 606 GNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSL 650
+ GA FLAVCRGK IV G+P+P D +V L
Sbjct: 612 ------------SPGASGAVFLAVCRGKVSEGLDFADTNGRGVIVTGLPYPPRMDPRVVL 659
Query: 651 KKKYNDTYR----SSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEE 706
K ++ D + + LSG +WY QA RA+NQAIGR IRHR DYGA+ L D RF
Sbjct: 660 KMQFLDEMKGQGGARGQFLSGRDWYRQQASRAVNQAIGRVIRHRHDYGAVFLCDHRFSYA 719
Query: 707 RNRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
RA + W+R +K YD F + + FFR
Sbjct: 720 DARAQLPSWVRPHVKVYDGFGHVIRDVAQFFR 751
Score = 158 bits (399), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/289 (34%), Positives = 154/289 (53%), Gaps = 31/289 (10%)
Query: 22 GIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQN 81
G+ V+FP+QPY Q +M +V+ L + + +LESPTGTGK+L LLC+TLAW+++
Sbjct: 8 GVTVDFPFQPYKCQEEYMTKVLECLQK-----KVNGVLESPTGTGKTLCLLCTTLAWREH 62
Query: 82 CKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKK 141
IS K A G P+ S+ G A +
Sbjct: 63 LH-----DAISARKIAARA-------QGELFPDRALSSW-----GNAASDGDGDNTACYT 105
Query: 142 MTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE---CK 198
P I YASRTHSQ++QVISE + T+YR + VL SR+ C + V+ +E+ + C+
Sbjct: 106 DIPKIIYASRTHSQLTQVISELRNTSYRPRVCVLGSREQLCIHPEVKKQESNHMQIHLCR 165
Query: 199 LLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADD 258
+ R+ C + NV + SL++ + DIEDLV G + C YY +R++
Sbjct: 166 KKVASRS--CHFYNNVEEK----SLEQELAAPILDIEDLVKSGNRHKLCPYYLSRNLKQQ 219
Query: 259 AQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDI 307
A ++F PY+Y+++ R A +D+KG ++I DEAHN+E + ++ S D+
Sbjct: 220 ADIIFMPYNYLLDAKSRRAHSIDLKGTVVIFDEAHNVEKMCEESASFDL 268
>gi|156379412|ref|XP_001631451.1| predicted protein [Nematostella vectensis]
gi|156218492|gb|EDO39388.1| predicted protein [Nematostella vectensis]
Length = 1082
Score = 177 bits (448), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 112/337 (33%), Positives = 160/337 (47%), Gaps = 79/337 (23%)
Query: 458 LSLWCLNPAVVFKDVAELSLS-IILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQV 516
+ WC +P KD+ +S +ILTSGTLSP+NSF++E+ + F LE PHVI+ Q+
Sbjct: 454 IHYWCFSPGHAMKDLMSQGVSSVILTSGTLSPLNSFTAEMQIPFPIRLENPHVIEKH-QM 512
Query: 517 LTSVISTGPDNYPLNASYK--------TADG--------------------YKLMEKLCN 548
+ +V++ PD LN+SY+ T G Y +M K
Sbjct: 513 MVAVVTKAPDGATLNSSYEFRSTPGYMTGLGNTIANFARTIPNGLLVFFPSYPVMNKCLE 572
Query: 549 RWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNN 608
W+ TG W+RL+ KP+F EP+G + DF ++ +Y I+ S
Sbjct: 573 HWQNTGIWARLSQYKPMFAEPRG--KGDFVQTMEDFYAKINDPS---------------- 614
Query: 609 DLNTIESQENANKKGASFLAVCRGKI---------------VVGIPFPNINDIQVSLKKK 653
LN GA+F AVCRGK+ + G+PFP + D +V LK
Sbjct: 615 -LN-----------GATFFAVCRGKVSEGLDFSDINGRAVVITGLPFPPMMDAKVKLKMS 662
Query: 654 YNDTY----RSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNR 709
+ D +S+ L+G EWY QA RA+NQA+GR IRHR D+GAI+L D RF
Sbjct: 663 FLDEMSRKDKSAIKGLTGREWYRQQASRAVNQAVGRVIRHRQDFGAILLCDVRFTYPDAL 722
Query: 710 AHISKWLRKSIKQYDSFDASLEGLKSFFRDVKGWVGK 746
+ W++ +K + F L FFR V K
Sbjct: 723 RELPSWVKPQVKIFKEFGHVQRELIQFFRKADIMVDK 759
Score = 170 bits (430), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 104/307 (33%), Positives = 165/307 (53%), Gaps = 37/307 (12%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
V + V+FP++PY Q+ +M +VI L + +A+LESPTGTGK+L LLC+TLAW+
Sbjct: 4 VRKVDVDFPFKPYDCQVAYMEKVIECLQTRK-----NAVLESPTGTGKTLCLLCATLAWR 58
Query: 80 QN--CKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKN 137
Q+ L+ Q + +K + + L N + E+ T S + + + +
Sbjct: 59 QSYVANLQLQQRGLCAAKEEEDGFQKSLGNK---LAEAASGTWDDSCSNKGSNFEI---- 111
Query: 138 VKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE- 196
P I YASRTHSQ+SQ + E K T YR ++++ SR+ C N V +++ +
Sbjct: 112 ------PKIIYASRTHSQLSQAVQELKATVYRPRVSIIGSREQLCINSDVLKQDSNSAKV 165
Query: 197 --CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARS 254
C+ + R C + N+ + +P+ E+ DIEDLV +GQ + C YY AR
Sbjct: 166 HMCRAKVTART--CHFYNNLEGNKSNPAF----TTEILDIEDLVRLGQKHKVCPYYMARE 219
Query: 255 MADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDID------ 308
+ A ++F PY+Y+++P R A +DI G+I++ DEAHN+E + + S D+
Sbjct: 220 LKTSADIIFMPYNYLLDPKSRKAHNLDISGSIVVFDEAHNLEKVCEETVSFDLTSFDIAS 279
Query: 309 --EDVLL 313
EDVLL
Sbjct: 280 CVEDVLL 286
>gi|119595648|gb|EAW75242.1| hCG22751, isoform CRA_c [Homo sapiens]
Length = 784
Score = 176 bits (446), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 110/330 (33%), Positives = 152/330 (46%), Gaps = 79/330 (23%)
Query: 457 TLSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQ 515
LS WC +P ++ + S+ILTSGTL+P++SF+ E+ + F CLE PH+ID Q
Sbjct: 17 VLSYWCFSPGHSMHELVRQGVRSLILTSGTLAPVSSFALEMQIPFPVCLENPHIIDKH-Q 75
Query: 516 VLTSVISTGPDNYPLNASYKTA----------------------------DGYKLMEKLC 547
+ V+ GPD L++++ Y +MEK
Sbjct: 76 IWVGVVPRGPDGAQLSSAFDRRFSEECLSSLGKALGNIARVVPYGLLIFFPSYPVMEKSL 135
Query: 548 NRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGN 607
WR ++ A KPLFVEP+ S+ F + YY RV G+
Sbjct: 136 EFWRARDLARKMEALKPLFVEPR--SKGSFSETISAYY--------------ARVAAPGS 179
Query: 608 NDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKK 652
GA+FLAVCRGK IV G+P+P D +V LK
Sbjct: 180 T--------------GATFLAVCRGKASEGLDFSDTNGRGVIVTGLPYPPRMDPRVVLKM 225
Query: 653 KYNDTYR----SSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERN 708
++ D + + LSG EWY QA RA+NQAIGR IRHR DYGA+ L D RF
Sbjct: 226 QFLDEMKGQGGAGGQFLSGQEWYRQQASRAVNQAIGRVIRHRQDYGAVFLCDHRFAFADA 285
Query: 709 RAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
RA + W+R ++ YD+F + + FFR
Sbjct: 286 RAQLPSWVRPHVRVYDNFGHVIRDVAQFFR 315
>gi|119595652|gb|EAW75246.1| hCG22751, isoform CRA_f [Homo sapiens]
Length = 865
Score = 176 bits (446), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 110/330 (33%), Positives = 152/330 (46%), Gaps = 79/330 (23%)
Query: 457 TLSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQ 515
LS WC +P ++ + S+ILTSGTL+P++SF+ E+ + F CLE PH+ID Q
Sbjct: 17 VLSYWCFSPGHSMHELVRQGVRSLILTSGTLAPVSSFALEMQIPFPVCLENPHIIDKH-Q 75
Query: 516 VLTSVISTGPDNYPLNASYKTA----------------------------DGYKLMEKLC 547
+ V+ GPD L++++ Y +MEK
Sbjct: 76 IWVGVVPRGPDGAQLSSAFDRRFSEECLSSLGKALGNIARVVPYGLLIFFPSYPVMEKSL 135
Query: 548 NRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGN 607
WR ++ A KPLFVEP+ S+ F + YY RV G+
Sbjct: 136 EFWRARDLARKMEALKPLFVEPR--SKGSFSETISAYY--------------ARVAAPGS 179
Query: 608 NDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKK 652
GA+FLAVCRGK IV G+P+P D +V LK
Sbjct: 180 T--------------GATFLAVCRGKASEGLDFSDTNGRGVIVTGLPYPPRMDPRVVLKM 225
Query: 653 KYNDTYR----SSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERN 708
++ D + + LSG EWY QA RA+NQAIGR IRHR DYGA+ L D RF
Sbjct: 226 QFLDEMKGQGGAGGQFLSGQEWYRQQASRAVNQAIGRVIRHRQDYGAVFLCDHRFAFADA 285
Query: 709 RAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
RA + W+R ++ YD+F + + FFR
Sbjct: 286 RAQLPSWVRPHVRVYDNFGHVIRDVAQFFR 315
>gi|395506651|ref|XP_003757644.1| PREDICTED: regulator of telomere elongation helicase 1 [Sarcophilus
harrisii]
Length = 1361
Score = 176 bits (446), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 113/329 (34%), Positives = 157/329 (47%), Gaps = 79/329 (24%)
Query: 458 LSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQV 516
LS WC +P +++ + + +IILTSGTL+P++SF+ E+ + F CLE PHVID Q+
Sbjct: 453 LSYWCFSPGFSMQELIQQEVRTIILTSGTLAPISSFTMEMQIPFPVCLENPHVIDKH-QI 511
Query: 517 LTSVISTGPDNYPLNASY-------------KTAD---------------GYKLMEKLCN 548
++ GPD L+++Y KT Y +MEK
Sbjct: 512 WVGIVPKGPDGVFLSSAYDKRFSEECLSSLGKTIGNIARVVPHGLLIFFPSYPVMEKSLE 571
Query: 549 RWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNN 608
WR+ ++ KP+FVEP+ S+ F V+ YY I
Sbjct: 572 YWRDHDFARKIEELKPVFVEPR--SKGGFTEVIDAYYEKI-------------------- 609
Query: 609 DLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKK 653
I + N GA+F+AVCRGK I+ G+PFP D +V LK +
Sbjct: 610 ----ICPKSN----GAAFMAVCRGKASEGLDFADMNGRGVIITGLPFPPRMDPRVILKMQ 661
Query: 654 YNDTYR----SSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNR 709
+ D R + LSG+EWY QA RA+NQAIGR IRHR D+GAI L D RF R
Sbjct: 662 FLDEMRGKSGTGGQYLSGHEWYRQQASRAVNQAIGRVIRHRQDFGAIFLCDHRFTNNDAR 721
Query: 710 AHISKWLRKSIKQYDSFDASLEGLKSFFR 738
A + W+R +K YD+F + FFR
Sbjct: 722 AQLPSWVRPYVKVYDNFGHIIRDAAQFFR 750
Score = 166 bits (420), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 101/292 (34%), Positives = 155/292 (53%), Gaps = 34/292 (11%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ G+ V+FP+QPY Q +M +V+ L + + +LESPTGTGK+L LLC+TLAW+
Sbjct: 6 LNGVTVDFPFQPYKCQEDYMAKVLECLQKK-----VNGILESPTGTGKTLCLLCTTLAWR 60
Query: 80 QNCKLKNQLANISHSKPDTEAVTD-PLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNV 138
++ K I+ E D P+++ G +T+G T +
Sbjct: 61 EHFKDTITARKIAERMQGVELFPDRPMSSWGN-----------AATDGDTTAYYTD---- 105
Query: 139 KKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE-- 196
P I YASRTHSQ+SQVISE + T YR + VL SR+ C N VR E+ +
Sbjct: 106 ----IPKIIYASRTHSQLSQVISELRSTTYRPKVCVLGSREQLCINPEVRKIESNHIQIH 161
Query: 197 -CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSM 255
C+ + + C + NV + S +K + DIEDLV G + C YY +R++
Sbjct: 162 VCRKKVSTHS--CHFYNNVEE----KSTEKELVTPILDIEDLVKGGNRHKVCPYYLSRTL 215
Query: 256 ADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDI 307
A ++F PY+Y+++ R A +D+KG ++I DEAHN+E + ++ S D+
Sbjct: 216 KQQADIIFMPYNYLLDSKTRRAHNIDLKGTVVIFDEAHNVEKVCEESASFDL 267
>gi|358334134|dbj|GAA52588.1| fanconi anemia group J protein homolog [Clonorchis sinensis]
Length = 668
Score = 176 bits (446), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 164/605 (27%), Positives = 251/605 (41%), Gaps = 176/605 (29%)
Query: 226 GGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGA 285
G C +V+ +V QV C Y+ +R +A A +VFCPYSY+++P+ R A+E G
Sbjct: 70 GACLKVYFGARYTDVVQV-PSCPYFCSRRLAKTADIVFCPYSYLLDPINRSALE----GM 124
Query: 286 ILILDEAHNI----------------EDIARDAGSVDIDEDVLLKLQMELEQVCSVNPMI 329
+ ++ H ++I+ +V + + + + MELE + V +
Sbjct: 125 LRVMQLTHTRLVHAGESAQPTQVWTGQEISGILSTVGLGPEKVTR--MELEGMLRVMQLT 182
Query: 330 YQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRELQEANISRQCFPIL---- 385
+ L+ E + T WTG + L + + +
Sbjct: 183 HTRLVHAG-------ESAQPT----------QVWTGQEISGILSTVGLGPEKVTRMEMAY 225
Query: 386 --LECATKAIKEATDTE-----SELPHLSGMSVITLEGLFSSLTYFFSRNGS-------- 430
L T E TD +E P L+ S+ E LF +L Y FS + +
Sbjct: 226 RKLSAYTSDSTEWTDRNGRSEGTEQPKLASGSLHLFEALFVALRYMFSFDSTAEGFYSEC 285
Query: 431 ---------HVSDYQLALQKYIKRDSK---------NPGGNWTH--------------TL 458
H++DY+ L + I + + N +W + +L
Sbjct: 286 LVFHRDDSKHLADYRFVLMETINYERQATDSSTEKDNSLNSWLNKRSAKSRYVEARELSL 345
Query: 459 SLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLT 518
+ WCLNP+VVF D+A +IL SGTLSP+ + +ELGV F LEA HVI D + T
Sbjct: 346 NFWCLNPSVVFSDLASEVRCLILVSGTLSPLEALEAELGVAFPIRLEAAHVIPKDRLLTT 405
Query: 519 SVISTGPDNYPLNASYKTADGYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFE 578
++ S+L K + +EP+ S +
Sbjct: 406 DLL-----------------------------------SQLRQVKHVMLEPR--SSVGLD 428
Query: 579 IVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGK----- 633
L +Y ++ Q S ++ R R + + S ++ GA LAVCRGK
Sbjct: 429 SWLAEFYAAVDQ-SVMSLSRSPRHPVSTPSAASRCHSH-SSQINGALVLAVCRGKVSEGL 486
Query: 634 ----------IVVGIPFPNINDIQVSLKKKYND-TYRSSKNL------------------ 664
I VGIP+P N+ QV K+++ND +RS L
Sbjct: 487 DFADAYGRLVIAVGIPYPAFNNPQVQQKREFNDRAHRSPGTLPTPPTIGSPANAAASTSP 546
Query: 665 ----------LSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNR--AHI 712
L+G+EWY QA+RALNQA+GRCIRH D+GAI L+D RF E+ +R A I
Sbjct: 547 SLSNPRITRVLTGSEWYDAQAYRALNQALGRCIRHLNDWGAIFLVDARFVEQPSRYLAGI 606
Query: 713 SKWLR 717
S+W+R
Sbjct: 607 SRWIR 611
>gi|297842879|ref|XP_002889321.1| hypothetical protein ARALYDRAFT_477275 [Arabidopsis lyrata subsp.
lyrata]
gi|297335162|gb|EFH65580.1| hypothetical protein ARALYDRAFT_477275 [Arabidopsis lyrata subsp.
lyrata]
Length = 868
Score = 175 bits (444), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 217/875 (24%), Positives = 351/875 (40%), Gaps = 231/875 (26%)
Query: 27 FPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCKLKN 86
FPY+PY Q+ FM + LD+ ++LESPTGTGKSLS++CS L W + K K
Sbjct: 10 FPYKPYSIQIDFMNALYQFLDKGGV-----SMLESPTGTGKSLSIICSALQWLIDRKDKR 64
Query: 87 QLANISH--------SKPD-----TEAVTDPLANGGGFIP---ESQPSTIPPSTNGQTAQ 130
+ SH +PD T D ++ P E P T G Q
Sbjct: 65 NSESESHKVDGNDDADEPDWMRTFTPNEEDRASDDKSPFPLRKERLPQVFSNPTEGDDDQ 124
Query: 131 VAM------------NNKNVKKKMTPT--------------------IFYASRTHSQISQ 158
+ N K+K +F+ SRTHSQ+SQ
Sbjct: 125 EFLLEEYQSQDESSPGGGNSKRKPARAFDTSSSEDEDDCSDDEQGFKVFFCSRTHSQLSQ 184
Query: 159 VISEYKKTAYRVPMAV--LASRKHYCTNKYVRDKEN---IDEECKLL------------- 200
+ E +KT + + V L SRK+ C N+ V N I+E C L
Sbjct: 185 FVKELRKTVFASILNVVSLGSRKNLCINEDVLKLANVTRINESCLDLQKKKKSQVSKKKN 244
Query: 201 LG--------DRNLGCPQFKNVHKVRGH---PSLQKGGCHEVHDIEDLVNVGQVVRGCSY 249
LG + GCP + HK++ S Q+ E DIEDLV +G+ +R C Y
Sbjct: 245 LGANVRIGRTKASCGCPLLRK-HKLQREFKAESFQQ----EAMDIEDLVQLGRQMRTCPY 299
Query: 250 YAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDE 309
Y +R MA A LV PY +++ R ++ + +K +++I+DEAHN+ DI I
Sbjct: 300 YGSRRMAPAADLVILPYQSLLSKSSRESLGLSLKNSVVIIDEAHNLADILLSMHDAKITL 359
Query: 310 DVLLKLQMELEQVCSVNPMIYQPLIEMTQDLVGWIERR----KATLAKREFQHFFSCWTG 365
L +Q CS+ + + Q+L+G RR L + + S W
Sbjct: 360 SQLEDIQ------CSI-----ESYLGRFQNLLGAGNRRYIQIMLILTRALLKPLASDWNL 408
Query: 366 DKALRELQEANISRQ-------------CFPILLECATKAIKEATDTESELPH-LSG--- 408
+ L N S+ F + ++ A ES + H +SG
Sbjct: 409 NSVNVGLDTGNPSKSKPCGACSMAINDFLFSLNIDNINLVKLLAYIKESNIIHKVSGYGE 468
Query: 409 --------------MSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNW 454
MS +T FS + + N D ++ + + S PGG+
Sbjct: 469 RVAMLQKDPVAHEEMSNLTSFRAFSDMLVALTNNN---GDGRIIVSRTSSSASGQPGGHI 525
Query: 455 THTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSEL-------GVQFGTCLEAP 507
+ + L A +F +V + + ++IL GTL P+ L +QF +C
Sbjct: 526 KYVM----LTGAKLFSEVVDEAHAVILAGGTLQPIEETRERLFPWLPSDQLQFFSC---S 578
Query: 508 HVIDVDLQVLTSVISTGPDNYPLNASYKTADGYKLMEKLC-------------------- 547
H++ + ++ +S GP + S+ + +++++L
Sbjct: 579 HIVPSE-SIMPIAVSHGPSGQSFDFSHSSRSSTRMIQELGLLMSNLVAVVPEGVIVFFSS 637
Query: 548 --------NRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSI--SQGSKCAVV 597
W +G R+ KK +F EP+ ++ E VL+ Y +I +G+ V
Sbjct: 638 FEYETQVHTAWSNSGILRRIMKKKRVFREPRRNTE--VEAVLRDYKEAIESERGAIMLAV 695
Query: 598 RKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKY--- 654
+V EG N +++ CR ++VG+P+P+ +DI++ + K+
Sbjct: 696 VGGKVS-EGINFSDSM----------------CRCVVMVGLPYPSPSDIELLERIKHIEG 738
Query: 655 ---NDTYRSSKNLLS---------------------GNEWYCNQAFRALNQAIGRCIRHR 690
+D+ + S L+ G E+Y N +A+NQ+IGR IRH
Sbjct: 739 LGDSDSVKPSVTLVDDSYYSGDVQAGFGVLKSCKRRGKEYYENLCMKAVNQSIGRAIRHE 798
Query: 691 FDYGAIILLDERFQEERNR----AHISKWLRKSIK 721
DY +I+L+D R+ + ++ +H S L K IK
Sbjct: 799 KDYASILLVDARYSNDPSKRTSHSHPSNKLPKWIK 833
>gi|313233484|emb|CBY09656.1| unnamed protein product [Oikopleura dioica]
Length = 675
Score = 174 bits (442), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 179/735 (24%), Positives = 305/735 (41%), Gaps = 134/735 (18%)
Query: 57 ALLESPTGTGKSLSLLCSTLAWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQ 116
+ ESPTGTGKSLS++CS + W ++ + + QL K D E +G +
Sbjct: 14 GIFESPTGTGKSLSIICSAIKWLKDHRNRAQLVT-QQPKVDKEE------DGELDWLDLD 66
Query: 117 PSTIPPSTNGQTAQVAMNNKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYR--VPMAV 174
GQ + IFYASRTHSQ+SQ + E +K+ ++ V +A
Sbjct: 67 SDYDDDDGEGQ-------------EFVEKIFYASRTHSQLSQFVKEIRKSPFKDSVTVAP 113
Query: 175 LASRKHYCTNKYVRDKENI---DEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEV 231
+ASR C N V+ + +E CK L ++N GC +FK +G L + +
Sbjct: 114 IASRATLCVNPKVKKLSTVSQMNESCKQL--NKNQGC-EFKTK---KGLSLLSHRMNNTL 167
Query: 232 HDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDE 291
DIED V G + C +Y AR + PY+ ++ P R + +++K +++I+DE
Sbjct: 168 MDIEDTVKFGNENKCCPFYGAREALPTVDVCVLPYNLLVVPSARESCGINLKNSVVIIDE 227
Query: 292 AHNIEDIARDAGSVDIDEDVLLKLQMELEQV-----CSVNP-------MIYQPLIEMTQD 339
AHN+ SV + + L + +L +NP + LI + +D
Sbjct: 228 AHNLAGAIESCYSVGVTLNALTEAYKQLNAYKAKFSARLNPENLMFVKQLLAVLIGLGKD 287
Query: 340 LVGWIERRKATLAKREFQHFFSCWTGDKALRELQEANISRQCFPILLECATKA-----IK 394
L + + RE L +A + LL+ TK+ +K
Sbjct: 288 LKRVNNSEQKIVTVREI---------------LNDAKLDNINLFELLKYMTKSLIAHKVK 332
Query: 395 EATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNW 454
D + P + ++ ++L ++N L + K + N G
Sbjct: 333 GFADKVANTPK------VIVKPKENALKEMLTKNVLITPGADLRIIK-----NANDG--- 378
Query: 455 THTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFG----TCLEAPHVI 510
+ ++ LNPA +F ++++ + S++L GT+ P + +L + + HVI
Sbjct: 379 KAQMKVFLLNPASIFAEISKDARSVLLAGGTMKPYQTLKDQLFAEVSSEKLSWFNCEHVI 438
Query: 511 DVDLQVLTSVISTGPDNYPLNASYKTADGYKLMEKLCN---------------------- 548
D Q+ V+ GP N ++ D + + + L
Sbjct: 439 S-DSQMNALVLQRGPTNERFIFNHSNKDNFAMKQDLGRALVDIVQTVPSGVVVFFASYKQ 497
Query: 549 ------RWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSIS-QGSKCAVVRKKR 601
++++G ++ K LF EPK +L+ Y S+ +G+ V +
Sbjct: 498 ETMFYEMFKKSGFLQQIENVKTLFREPK--ETAGVAPLLEKYEMSVRVRGAILFAVVGGK 555
Query: 602 VKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYNDTYRSS 661
V EG N + +CR I++G+P+P+I ++ L+ DT +S
Sbjct: 556 VS-EGINFSD----------------GLCRAVIMIGVPYPDIKSAEIKLRM---DTL-NS 594
Query: 662 KNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIK 721
K G Y RA+NQ +GR IRHR D I+ D R+ E R R H+ W++ +
Sbjct: 595 KRPGGGQMLYTGLCMRAVNQCVGRAIRHRDDSSLILFCDGRYSEPRVRDHLPDWIKTRLT 654
Query: 722 QYDSFDASLEGLKSF 736
YD+FD + + + F
Sbjct: 655 SYDNFDTAKKHMIDF 669
>gi|339239905|ref|XP_003375878.1| DNA repair helicase family protein [Trichinella spiralis]
gi|316975433|gb|EFV58877.1| DNA repair helicase family protein [Trichinella spiralis]
Length = 810
Score = 173 bits (438), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 205/878 (23%), Positives = 353/878 (40%), Gaps = 232/878 (26%)
Query: 35 QLVFMCRVISTLDRAQRDGH---CHALLESPTGTGKSLSLLCSTLAW------------- 78
+++ C + + +D A+R + + ESPTGTGKSLSLLC +L W
Sbjct: 19 EVLVECDIAAEVDLAKRSSNELNKIGIFESPTGTGKSLSLLCGSLTWLKRRRNNYIEELE 78
Query: 79 ---QQNCKLKNQLA-----------------------NISHSKPDTEAVTDPLANGGGFI 112
++ K+ + A + + E +++ +N +
Sbjct: 79 RTVEEKTKIIKETALENWLEEFDLKAEAQKSLDEAKIEVDQIRRVQERLSEVKSNVEELL 138
Query: 113 PESQPSTIPPSTNGQTAQVAMNNKNVKK-KMTPTIFYASRTHSQISQVISEYKKTAYR-- 169
+ + +T+ +T + + + ++ + P I+Y SRTHSQ++Q+ E K+ +
Sbjct: 139 IDYESEDDLDATSEKTVDIGERSDDERECILKPKIYYCSRTHSQLAQIAQELCKSVHEES 198
Query: 170 VPMAVLASRKHYCTNKYVRDKENIDEECKLLLGDRNLGCPQFKNVHKVRGH--------- 220
M L SR+ C N+ VR +++ L+ ++ L + + K H
Sbjct: 199 TTMVTLGSRQTLCINESVRKLKSVG-----LMNEKCLDLQKESSKVKKSDHGCSKKKKSK 253
Query: 221 -PSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAME 279
P L++ +D++++G VR C YYA R A +V PY N R
Sbjct: 254 CPFLRR---------DDVLHLGTAVRACPYYACRKSVAAADIVLMPYQMFFNRATRNTCG 304
Query: 280 VDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQVCSVNPMIYQPLIEMTQD 339
+ + ++I+DEAHN+ + M ++C +Q L Q
Sbjct: 305 LSLSECVVIVDEAHNLLETIE---------------SMYRFEIC------FQKLNLAKQQ 343
Query: 340 LVGWIER--RKATLAKREFQHF--FSCWTGDKALRELQEANISR----------QCFPI- 384
L +I+R K L R F+ FS +KA+ + + +IS CF +
Sbjct: 344 LQQYIQRYQTKNLLHLRHFETVLKFSANFLEKAVGKGESYSISEFACLIGIDSINCFKLH 403
Query: 385 -----------LLECATKAIKEATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVS 433
L ++A K +D + SV GLF S+ + S + +
Sbjct: 404 EFIEKSHLCEKLRGFTSRAGKYVSD------QMEDFSV----GLFHSIMSYISCFTNKIG 453
Query: 434 DYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFS 493
D + ++K + + + LNPA +DV + + S++L GT+ P++ +
Sbjct: 454 DGRFLIEKTLS----------SSRIIFILLNPAAFLEDVFKEARSVVLAGGTMEPISELN 503
Query: 494 SELG----------VQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTADGYKLM 543
S L VQF HV+ + +L ++ TGP L + + +
Sbjct: 504 SRLFDILSIPKQRIVQFS----CDHVVS-NKNILPIILHTGPGGNVLKFDFSSRTSAAIF 558
Query: 544 EKLCN----------------------------RWRETGQWSRLNAKKPLFVEPKGGSQE 575
++L N +++G L AKK +F EPK S
Sbjct: 559 QELGNCLVQLSKIIPGGIVCFLPSYNYEETVFQYLKKSGLLQELAAKKEIFREPKTAS-- 616
Query: 576 DFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGK-- 633
D VL Y + V + G N+ N+ K GA AV GK
Sbjct: 617 DVNSVLSKYADV--------------VMKFGTNN--------NSEKNGAFLFAVVGGKMS 654
Query: 634 -------------IVVGIPFPNINDIQVSLKKKYNDTYRSSKN--LLSGNEWYCNQAFRA 678
I+VG+P+P+I+ ++ +K KY D + S+KN + +G E+Y N F+A
Sbjct: 655 EGINFSDALARCVIMVGLPYPDISSSEMKIKMKYLDEHVSNKNSAMNAGREFYENICFKA 714
Query: 679 LNQAIGRCIRHRFDYGAIILLDERFQEERNRAHIS------KWLRKSIKQYDSFDASLEG 732
+NQ+IGR IRH+ DY AII LD R + + +W +++ Q F A++
Sbjct: 715 VNQSIGRAIRHKDDYSAIIFLDSRSLTAADDTSSTSCDEPRQWFIENV-QETFFTATVAL 773
Query: 733 LKSFFRDVKGWVGKKMFNGLENSDNDVDHVSSMDQCKE 770
L+ +V + N+ +D+DH S+ Q KE
Sbjct: 774 LEQIL-----FVRRMNLRKPPNTTDDLDHFPSIHQIKE 806
>gi|51491862|ref|NP_001003919.1| probable ATP-dependent RNA helicase DDX11 [Mus musculus]
gi|81884425|sp|Q6AXC6.1|DDX11_MOUSE RecName: Full=Probable ATP-dependent RNA helicase DDX11; AltName:
Full=DEAD/H box protein 11
gi|50926041|gb|AAH79656.1| DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 (CHL1-like helicase
homolog, S. cerevisiae) [Mus musculus]
Length = 880
Score = 172 bits (436), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 180/711 (25%), Positives = 297/711 (41%), Gaps = 155/711 (21%)
Query: 146 IFYASRTHSQISQVISEYKKTAY--RVPMAVLASRKHYCTNKYVRDKENIDEECKLLLGD 203
I+Y SRTHSQ++Q + E K+ + + L SR+ C N+ V++ ++ L+ D
Sbjct: 201 IYYCSRTHSQLAQFVREVLKSPFGKETRLVSLGSRQTLCVNEDVKNLGSVQ-----LMND 255
Query: 204 R--------------------------NLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDL 237
R CP F N ++ L+ EV D+E L
Sbjct: 256 RCVDMQRSKREKNGTGEDKPKRKRQKIQTSCP-FYNHEQME---LLRDEILLEVKDMEQL 311
Query: 238 VNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIED 297
V +G+ R C YY +R AQLV PY +++ R A + ++G ++I+DEAHN+ D
Sbjct: 312 VALGKEARACPYYGSRFAIPAAQLVVLPYPMLLHAATRQAAGIRLQGQVVIIDEAHNLID 371
Query: 298 IARDAGSVDIDEDVLLKLQMELEQ--------VCSVNPMIYQPLIEMTQDLV----GWIE 345
+ S +++ L + +L Q + + N M + ++ + + V G ++
Sbjct: 372 TITNIHSTEVNGSQLCQAHSQLLQYMERYRKRLKAKNLMYIKQILYLLEKFVAVLGGNVK 431
Query: 346 RRKATLAKRE------------FQHFFSCWTGDKALRELQEANISRQCFPILLECATKAI 393
+ T + + FQ K R L+++ +SR+ F EC +
Sbjct: 432 QNPTTQSLSQTGSELKSINDFLFQSQVDNINLFKVQRYLEKSMLSRKLFG-FTECFGVVL 490
Query: 394 KEATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVS----------DYQLALQKYI 443
+D++ E L+G L+ L S T G V+ + LA
Sbjct: 491 PSLSDSQ-ENRGLAGFQQF-LKSLQSGPTEDSPEEGQAVALRPASPLMHIEAFLAALTTA 548
Query: 444 KRDSK----NPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSEL--- 496
+D + G +L LNPAV F V + ++++ GT+ PM+ F +L
Sbjct: 549 NQDGRVIVNRQGSVGQSSLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPMSDFREQLLAC 608
Query: 497 -GVQFGTCLE--APHVIDVDLQVLTSVISTGPDNYPLNASYKTADGYKLMEK-------L 546
GV+ G +E HVI D +L +I +GP N L +Y+ + +++E+ L
Sbjct: 609 SGVEAGRVVEFSCGHVIPPD-NILPLIICSGPSNQQLEFTYQRRELPQMVEETGRILCNL 667
Query: 547 CN---------------------RWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYY 585
CN W +TG +RL+ +K +F EPK SQ E VL Y
Sbjct: 668 CNVVPGGVVCFLPSYEYLRQVHAHWDKTGLLTRLSVRKKIFQEPKRASQ--VEQVLMAY- 724
Query: 586 NSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGK------------ 633
SKC + S + GA L+V GK
Sbjct: 725 ------SKCIMSC----------------SHSEGHLTGALLLSVVGGKMSEGINFSDDLG 762
Query: 634 ---IVVGIPFPNINDIQVSLKKKY-NDTY-RSSKNLLSGNEWYCNQAFRALNQAIGRCIR 688
++VG+P+PNI ++ K Y N T R+ L G N +A+NQ+IGR IR
Sbjct: 763 RCVVMVGMPYPNIKSPELQEKMAYLNQTLPRTQGQPLPGTVLIENLCMKAINQSIGRAIR 822
Query: 689 HRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFRD 739
H+ D+ +I+LLD R+ A + W+R ++ +F + ++ F R+
Sbjct: 823 HQRDFASIVLLDHRYARPSILAKLPAWIRDRVEVKATFGPAFAAVRKFHRE 873
Score = 41.6 bits (96), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 54/108 (50%), Gaps = 17/108 (15%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+GGI FP+ PY Q FM + L+ G + ESPTGTGKSLSL+C L+W
Sbjct: 8 IGGIHFPFPFPPYPIQKDFMAELYKVLE-----GGKIGIFESPTGTGKSLSLICGALSW- 61
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQ 127
L + K EA+ LA G G P S+ +++ S++ Q
Sbjct: 62 --------LRDFEKKKLQAEALL--LAPGSG-PPSSEKNSLLTSSSCQ 98
>gi|268566755|ref|XP_002639805.1| C. briggsae CBR-BCH-1 protein [Caenorhabditis briggsae]
gi|229891627|sp|A8WS58.1|RTEL1_CAEBR RecName: Full=Regulator of telomere elongation helicase 1 homolog
Length = 994
Score = 172 bits (436), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 108/308 (35%), Positives = 159/308 (51%), Gaps = 47/308 (15%)
Query: 25 VEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCKL 84
++FP++PY Q +FM VI LD A LESPTGTGK+LSLLCSTLAW Q K
Sbjct: 19 IKFPFEPYECQRIFMKNVIDVLDM-----KLDAALESPTGTGKTLSLLCSTLAWVQKLK- 72
Query: 85 KNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKKMTP 144
SKP A GG E + +K P
Sbjct: 73 --------ESKPMDFATWQSSGAGGAEKTEDK---------------------LKNSFIP 103
Query: 145 TIFYASRTHSQISQVISEYKKTAYR-VPMAVLASRKHYCTNKYVRDKENIDEE---CKLL 200
TIFYASRTHSQ+ QV+ E +T Y+ V +L SR+H+C N+ V+ + + + C+ L
Sbjct: 104 TIFYASRTHSQLEQVVHELNRTEYKWVKTTILGSREHFCINQKVKKIKESNRQAHVCRGL 163
Query: 201 LGDRNLGCP---QFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMAD 257
+ R+ C +F + + + L+KG E DIED V +G C Y+ +R ++
Sbjct: 164 VSKRS--CHYYNKFDALTTDKANEILEKG---EAMDIEDFVKIGTQNSICPYFMSRQRSE 218
Query: 258 DAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQM 317
A+L+ PY+YII+P +R ++D+K +I+I DEAHN+E I S ++ +
Sbjct: 219 TAELILLPYNYIIDPKMRRRYKLDLKNSIVIFDEAHNLESICESNASAELSSTSIALCIE 278
Query: 318 ELEQVCSV 325
EL++V ++
Sbjct: 279 ELKKVLAL 286
Score = 127 bits (319), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 158/354 (44%), Gaps = 97/354 (27%)
Query: 442 YIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQF 500
YI++DS + +C ++ + + + +++L SGTLSP+ +F+ +G+ F
Sbjct: 453 YIRKDSGK------LVIKYFCFQASISMRMLKMRGVRNVLLASGTLSPIQAFTYNMGLNF 506
Query: 501 GTCLEAPHVIDVDLQVLTSVISTGPDNYPL-------NASYKTADG-------------- 539
G LE H + + VLTS+++ G + N Y + G
Sbjct: 507 GAILENEHALK-QVPVLTSIVTRGKHGGLVGSFQNRKNIEYVSDVGESLIRVMETTPQGV 565
Query: 540 ------YKLMEKLCNRWRETGQ---------WSRLNAKKPLFVEPKGGSQEDFEIVLKHY 584
Y M++L W++T + W ++ K + VEP+ ++E V Y
Sbjct: 566 LVFFSSYSQMDELVEVWKKTKRGASDSPETFWEKMEKTKKIAVEPR--AKEQLAAVRLRY 623
Query: 585 YNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGK----------- 633
+S+ GA+ LAVCRGK
Sbjct: 624 TQGVSE------------------------------PHGAALLAVCRGKVSEGIDFCDAE 653
Query: 634 ----IVVGIPFPNINDIQVSLKKKYNDTYRSSKNLL----SGNEWYCNQAFRALNQAIGR 685
I+VGIP+P I+D +V LKK Y D K+L S +WY +AFRA+NQAIGR
Sbjct: 654 SRAVIIVGIPYPPIHDERVVLKKMYLDDLMGRKDLTNEPQSSRDWYQMEAFRAVNQAIGR 713
Query: 686 CIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFRD 739
+RH+ D+G ++L+D R+ + KWLR +I + DS + +L+ + FF++
Sbjct: 714 VLRHKNDFGTVVLIDTRYASAKPEM-FPKWLRNTISRCDSNNCALKTAR-FFKE 765
>gi|148706380|gb|EDL38327.1| DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 (CHL1-like helicase
homolog, S. cerevisiae), isoform CRA_a [Mus musculus]
Length = 942
Score = 172 bits (436), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 180/711 (25%), Positives = 297/711 (41%), Gaps = 155/711 (21%)
Query: 146 IFYASRTHSQISQVISEYKKTAY--RVPMAVLASRKHYCTNKYVRDKENIDEECKLLLGD 203
I+Y SRTHSQ++Q + E K+ + + L SR+ C N+ V++ ++ L+ D
Sbjct: 263 IYYCSRTHSQLAQFVREVLKSPFGKETRLVSLGSRQTLCVNEDVKNLGSVQ-----LMND 317
Query: 204 R--------------------------NLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDL 237
R CP F N ++ L+ EV D+E L
Sbjct: 318 RCVDMQRSKREKNGTGEDKPKRKRQKIQTSCP-FYNHEQME---LLRDEILLEVKDMEQL 373
Query: 238 VNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIED 297
V +G+ R C YY +R AQLV PY +++ R A + ++G ++I+DEAHN+ D
Sbjct: 374 VALGKEARACPYYGSRFAIPAAQLVVLPYPMLLHAATRQAAGIRLQGQVVIIDEAHNLID 433
Query: 298 IARDAGSVDIDEDVLLKLQMELEQ--------VCSVNPMIYQPLIEMTQDLV----GWIE 345
+ S +++ L + +L Q + + N M + ++ + + V G ++
Sbjct: 434 TITNIHSTEVNGSQLCQAHSQLLQYMERYRKRLKAKNLMYIKQILYLLEKFVAVLGGNVK 493
Query: 346 RRKATLAKRE------------FQHFFSCWTGDKALRELQEANISRQCFPILLECATKAI 393
+ T + + FQ K R L+++ +SR+ F EC +
Sbjct: 494 QNPTTQSLSQTGSELKSINDFLFQSQVDNINLFKVQRYLEKSMLSRKLFG-FTECFGVVL 552
Query: 394 KEATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVS----------DYQLALQKYI 443
+D++ E L+G L+ L S T G V+ + LA
Sbjct: 553 PSLSDSQ-ENRGLAGFQQF-LKSLQSGPTEDSPEEGQAVALRPASPLMHIEAFLAALTTA 610
Query: 444 KRDSK----NPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSEL--- 496
+D + G +L LNPAV F V + ++++ GT+ PM+ F +L
Sbjct: 611 NQDGRVIVNRQGSVGQSSLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPMSDFREQLLAC 670
Query: 497 -GVQFGTCLE--APHVIDVDLQVLTSVISTGPDNYPLNASYKTADGYKLMEK-------L 546
GV+ G +E HVI D +L +I +GP N L +Y+ + +++E+ L
Sbjct: 671 SGVEAGRVVEFSCGHVIPPD-NILPLIICSGPSNQQLEFTYQRRELPQMVEETGRILCNL 729
Query: 547 CN---------------------RWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYY 585
CN W +TG +RL+ +K +F EPK SQ E VL Y
Sbjct: 730 CNVVPGGVVCFLPSYEYLRQVHAHWDKTGLLTRLSVRKKIFQEPKRASQ--VEQVLMAY- 786
Query: 586 NSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGK------------ 633
SKC + S + GA L+V GK
Sbjct: 787 ------SKCIMSC----------------SHSEGHLTGALLLSVVGGKMSEGINFSDDLG 824
Query: 634 ---IVVGIPFPNINDIQVSLKKKY-NDTY-RSSKNLLSGNEWYCNQAFRALNQAIGRCIR 688
++VG+P+PNI ++ K Y N T R+ L G N +A+NQ+IGR IR
Sbjct: 825 RCVVMVGMPYPNIKSPELQEKMAYLNQTLPRTQGQPLPGTVLIENLCMKAINQSIGRAIR 884
Query: 689 HRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFRD 739
H+ D+ +I+LLD R+ A + W+R ++ +F + ++ F R+
Sbjct: 885 HQRDFASIVLLDHRYARPSILAKLPAWIRDRVEVKATFGPAFAAVRKFHRE 935
Score = 41.6 bits (96), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 54/108 (50%), Gaps = 17/108 (15%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+GGI FP+ PY Q FM + L+ G + ESPTGTGKSLSL+C L+W
Sbjct: 44 IGGIHFPFPFPPYPIQKDFMAELYKVLE-----GGKIGIFESPTGTGKSLSLICGALSW- 97
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQ 127
L + K EA+ LA G G P S+ +++ S++ Q
Sbjct: 98 --------LRDFEKKKLQAEALL--LAPGSG-PPSSEKNSLLTSSSCQ 134
>gi|430812749|emb|CCJ29870.1| unnamed protein product [Pneumocystis jirovecii]
Length = 850
Score = 172 bits (435), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 175/693 (25%), Positives = 307/693 (44%), Gaps = 135/693 (19%)
Query: 146 IFYASRTHSQISQVISEYKKTAYR----------VPMAVLASRKHYCTNKYVRDKENID- 194
I YASRTHSQ++Q I+E ++ ++ V LASRK+ C N V NI+
Sbjct: 196 IIYASRTHSQLTQFINELRRVSFPSTFQDNTVQPVRHIALASRKNLCINPNVSKLSNINL 255
Query: 195 --EECKLLLGD--------RNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVV 244
E+C L R L +H R H + DIEDLV +GQ +
Sbjct: 256 INEKCIELQKHNTIPEGRCRYLPKDDKTKIHNFRDH------ALANIRDIEDLVILGQKL 309
Query: 245 RGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARD--A 302
C YY++R+ A+++ PY ++ R + + +K I+I+DEAHN+ D +
Sbjct: 310 DICPYYSSRTALKLAEIITLPYPLLLQASARETLNLSLKNNIVIIDEAHNLIDTITSIYS 369
Query: 303 GSVDIDEDVLLKLQMEL------EQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREF 356
++ + L Q+ + +++ N + + +I++ +++ ++E + + +
Sbjct: 370 STITFSQVSLAMNQINIYLSKFNKKLKGKNLVYIKQIIKLLKNISNFMECKNNIIGDIQV 429
Query: 357 QHFFSCWTGD-------KALRELQEANISRQCFPILLECATKAIKEATDTESE----LPH 405
+ + G K + ++ + ++R+ + + + T+TE LP
Sbjct: 430 EQSEILFYGGGDQVNIYKLEKYMKNSGLARKVDEYFEKKSKNLDQTKTNTEKNIILGLPI 489
Query: 406 LSGMS--VITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCL 463
LS + ++ L F+ FF H+ Q+ N N L L
Sbjct: 490 LSHIQTFLLNLTNPFTEGKIFFG----HIEKAQI-----------NGKTNTDCYLKYLLL 534
Query: 464 NPAVVFKDVAELSLSIILTSGTLSPMNSFSSEL-------GVQFGTCLEAPHVIDVDLQV 516
NP FK++ + ++IL GT+ PM+ F +L + +C H+I D +
Sbjct: 535 NPCYQFKEIVNEARAVILAGGTMEPMDDFIYQLFPYLQKEKIHRFSC---GHIISPD-HL 590
Query: 517 LTSVISTGPDNYPLNASYKTADGYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKG----- 571
++STGP +Y+ + ++ +L + + +N + V P G
Sbjct: 591 CAIIVSTGPTRKEFIFNYEKRNNDDILNELGS--------ALINLCR---VIPDGVICFF 639
Query: 572 GSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDL--------NTIESQENANKKG 623
S + E ++K ++ I QG+K ++ + K++ + D+ NTI S ++ G
Sbjct: 640 PSYDYLEEIVKKWH--IKQGTKLSIWERLEQKKKFSTDIENMLQNYSNTINSSNTSHYNG 697
Query: 624 ASFLAVC---------------RGKIVVGIPFPNINDIQVSLKKKY-NDTYR-------- 659
A L+V RG I+VG+PFPNI + K ++ + +R
Sbjct: 698 ALLLSVIGGKLSEGINFSDKLGRGVIIVGLPFPNIQSAEWKAKLEFVENNFRQNFLNNPS 757
Query: 660 ----SSKNLLSG--NEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHIS 713
S +NL+ E+Y N R++NQ+IGR IRHR DY AII LD+R++ E R IS
Sbjct: 758 IQKGSIENLIKSIRKEYYENTCMRSVNQSIGRAIRHRNDYAAIIFLDKRYESEHIRDKIS 817
Query: 714 KWLRKSI-----KQYDSFDASLEGLKSFFRDVK 741
KW++ SI + D+F L+ L +FF + K
Sbjct: 818 KWIKNSIISPDKETKDNFGLLLKHLINFFENKK 850
>gi|390352857|ref|XP_001196422.2| PREDICTED: regulator of telomere elongation helicase 1-like
[Strongylocentrotus purpuratus]
Length = 402
Score = 172 bits (435), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 106/305 (34%), Positives = 145/305 (47%), Gaps = 75/305 (24%)
Query: 478 SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTA 537
SIILTSGTL+P+NSF SEL + F LE PHVID Q++ V++ GPD LN+SY+T
Sbjct: 11 SIILTSGTLAPLNSFKSELSIDFPIQLENPHVIDKH-QMVVGVMTKGPDGTVLNSSYQTR 69
Query: 538 ----------------------------DGYKLMEKLCNRWRETGQWSRLNAKKPLFVEP 569
Y +M W+E+G +R+ K +F+EP
Sbjct: 70 FKKEYVLSLGNAIVNFARMVPNGLLVFFPSYPVMNHAIEIWQESGVSNRITQYKEMFIEP 129
Query: 570 KGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAV 629
+G + DF+ ++ +Y E + GA+F AV
Sbjct: 130 RG--KRDFKEAMESFY----------------------------ERVRDPTLNGAAFFAV 159
Query: 630 CRGK---------------IVVGIPFPNINDIQVSLKKKYND-TYRSSKNLLSGNEWYCN 673
CRGK ++ G+PFP D +V LK +Y D R + LSG WY
Sbjct: 160 CRGKVSEGLDFADNNGRAVVITGLPFPPRKDPRVMLKMQYLDEAKRRNPQGLSGQMWYRQ 219
Query: 674 QAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGL 733
QA RA+NQAIGR IRHR D+GAI+L D RF RA + W+R + YD F + L
Sbjct: 220 QASRAVNQAIGRVIRHRQDFGAILLCDTRFTNSEARAQLPSWVRPHLTVYDKFGQGVRDL 279
Query: 734 KSFFR 738
+FF+
Sbjct: 280 MNFFK 284
>gi|383862044|ref|XP_003706494.1| PREDICTED: regulator of telomere elongation helicase 1 homolog
[Megachile rotundata]
Length = 974
Score = 171 bits (434), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 105/334 (31%), Positives = 157/334 (47%), Gaps = 77/334 (23%)
Query: 453 NWTHTLSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVID 511
N +S WC +P + E + SI+LTSGTLSP+ F S+LG+ LE PH++
Sbjct: 446 NEGKIISYWCFSPGYSMHQLMEQGVHSIVLTSGTLSPLQPFISDLGIPIEVQLENPHIVK 505
Query: 512 VDLQVLTSVISTGPDNYPLNASYKTAD----------------------------GYKLM 543
D Q+ V+S GPD Y LN+S+ T + Y +M
Sbjct: 506 GD-QICVGVLSQGPDGYSLNSSFNTRNDPKYIMSLGRTIFNFSCLIPEGLLVFFPSYPVM 564
Query: 544 EKLCNRWRETGQWSRLNAKK---PLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKK 600
+K W+ G W+++ +K +++F ++ YY I+ S
Sbjct: 565 KKCREEWQNVGLWTKIAERKVIIIYICYIIIYIRDEFASIMSEYYEKINDPS-------- 616
Query: 601 RVKREGNNDLNTIESQENANKKGASFLAVCRGKI---------------VVGIPFPNIND 645
KGA F+AVCRGK+ + G+PFP + D
Sbjct: 617 --------------------HKGAIFMAVCRGKVSEGLDFANANGRAVLITGLPFPPLKD 656
Query: 646 IQVSLKKKY-NDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQ 704
+V LK++Y + R K LSG +WY +A RA+NQAIGR IRH+ DYGAIIL D RF+
Sbjct: 657 PRVILKQQYLEEMKRLDKETLSGQQWYQLEASRAVNQAIGRIIRHKNDYGAIILCDCRFE 716
Query: 705 EERNRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
+ +S WLR +K++++F + L+ FF+
Sbjct: 717 NPSFKKQLSAWLRPHVKKFNNFGVITKDLRDFFK 750
Score = 142 bits (357), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 107/298 (35%), Positives = 155/298 (52%), Gaps = 41/298 (13%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ + V FP++PY Q +M +VI L + + +LESPTGTGK+LSLLCS+L+W
Sbjct: 6 INNVIVNFPFKPYSVQEEYMTKVIECLQNNK-----NGVLESPTGTGKTLSLLCSSLSWL 60
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGF------IPESQPSTIPPSTNGQTAQVAM 133
K + Q ++ AV +P G F + E+ ST PST A
Sbjct: 61 LTRKAQMQAQSL------IGAVDNPTFGGHFFKKLNNELKEATGST-KPSTGFTWA---- 109
Query: 134 NNKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYR-VPMAVLASRKHYCTNKYVRDKEN 192
P I YASRTHSQ+SQ + E K+T+Y+ V +AVL SR C + V + N
Sbjct: 110 ---------APKIIYASRTHSQLSQAMQELKRTSYKHVSVAVLGSRDQLCIHPEVSKETN 160
Query: 193 IDEE---CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSY 249
+ C L R C + NV + P ++ EV DIEDLV GQ R C Y
Sbjct: 161 SSNKIHMCHSKLKSRT--CFYYNNVETRKEDPFFKQ----EVLDIEDLVKAGQKYRCCPY 214
Query: 250 YAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDI 307
+ +R + A + F PY+Y+++P R + +D++ +++LDEAHNIE I +A S+ I
Sbjct: 215 FLSRELKQTADITFMPYNYLLDPKSRRSQGIDLQNCVVLLDEAHNIEKICEEAASLQI 272
>gi|324502086|gb|ADY40918.1| Fanconi anemia group J protein [Ascaris suum]
Length = 962
Score = 171 bits (434), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 105/330 (31%), Positives = 156/330 (47%), Gaps = 79/330 (23%)
Query: 457 TLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQV 516
T + WC+ PA+ + D + S+IL SGTL PM++F SELG +F +E VI D +
Sbjct: 641 TFNFWCMRPALAYLDAFKECRSVILASGTLCPMDTFRSELGTEFQQMMEGSQVIPSD-HI 699
Query: 517 LTSVISTGPDNYPLNASYKTADG-----------------------------YKLMEKLC 547
+VI +GP YPL +Y+ + Y+L++++
Sbjct: 700 FAAVIPSGPTGYPLCGTYRNINSDDRFVREISLLLKSVCEIVPKGVLCFLASYRLLDQIY 759
Query: 548 NRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKH---YYNSISQGSKCAVVRKKRVKR 604
G ++ K + EP+ SQ + EI+ ++ NS G +C
Sbjct: 760 EFMETAGILRQIQTIKRVLCEPRRSSQMN-EIMAQYEEAITNSARYGPQCT--------- 809
Query: 605 EGNNDLNTIESQENANKKGASFLAVCRGKIV---------------VGIPFPNINDIQVS 649
GA AV RGK+ VGIPFPN D QVS
Sbjct: 810 ------------------GALMFAVFRGKVSEGIDFADDRARCVVSVGIPFPNAMDEQVS 851
Query: 650 LKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEER-- 707
KKK+ND +L+G+EWY QA+RALNQA+GRC+RHR D+GAI+++DER + R
Sbjct: 852 EKKKFNDDNCKKMRILTGDEWYTMQAYRALNQALGRCLRHRSDWGAILMVDERLLQRRSN 911
Query: 708 -NRAHISKWLRKSIKQYDSFDASLEGLKSF 736
N +SKW+R+ ++ + +E L+ F
Sbjct: 912 PNATKVSKWIREQLRPLSGYKHFVEELQQF 941
Score = 132 bits (332), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 105/371 (28%), Positives = 173/371 (46%), Gaps = 78/371 (21%)
Query: 20 VGGIQVEFP--YQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLA 77
VGG+ V+ P PY +Q M +++ +L +AL+ESPTG+GK+L LL +T A
Sbjct: 52 VGGLVVKLPPGLTPYTTQRTMMAKILMSLK-----NKLNALIESPTGSGKTLGLLSATCA 106
Query: 78 WQQNCKLKNQLANISHSKPDTEAV--TDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNN 135
W K + + + + AV + + G ES P+++ S T ++++
Sbjct: 107 WLVRYKEERKRSKAECRACNKHAVLPINSMLPGQENSLESLPTSLTDSPEPSTEN-SLDS 165
Query: 136 KNVKKKMT------------PTIFYASRT------------------------------- 152
+VK +T P+ Y R+
Sbjct: 166 PSVKPMLTLEDEFDSDFAASPSSTYIRRSSLLSAEMKRSRLEEADGEEKESREGHTCLPR 225
Query: 153 ---------HSQISQVISEYKKTAY----RVPMAVLASRKHYCTNKYVRDKENIDEECKL 199
H QISQV+ E+ + Y + +LASR+H C N VR+ +++ +CK
Sbjct: 226 VTIYYGTRTHKQISQVVGEFARLPYGHDGTIRHTILASREHSCINLAVRNSGDVNGKCKE 285
Query: 200 LLGDRNLGCPQFKNVHK--------VRGHPSLQKGGCHEVHDIEDLVNVGQVVRG--CSY 249
L+ +GC +KN + VR S +V DIEDLV+ + C Y
Sbjct: 286 LISAAGVGC-SYKNSMRGKYEKSGSVRKLVSQNLERSDDVWDIEDLVSALKTSSPALCPY 344
Query: 250 YAA-RSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDID 308
+++ R + DA +VFCP+SY+++P+IR +V +K A++ILDEAHN+ED+ R+A S
Sbjct: 345 FSSTRVLTQDADIVFCPFSYMLDPIIRDNSDVTLKNAVVILDEAHNVEDVCREAVSFSFT 404
Query: 309 EDVLLKLQMEL 319
E ++ + +L
Sbjct: 405 EREIVGTRADL 415
>gi|350590582|ref|XP_003483098.1| PREDICTED: Fanconi anemia group J protein-like, partial [Sus
scrofa]
Length = 487
Score = 171 bits (433), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 89/212 (41%), Positives = 123/212 (58%), Gaps = 44/212 (20%)
Query: 542 LMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKR 601
L+EKL RW TG W L K + VEP+ G + DF+ +LK YY++I
Sbjct: 1 LLEKLKERWLSTGLWHNLELVKTVIVEPQKGEKTDFDELLKVYYDAI------------- 47
Query: 602 VKREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDI 646
K +G D GA +AVCRGK I VGIPFPN+ D+
Sbjct: 48 -KYKGEKD-------------GALLVAVCRGKVSEGLDFSDDNARAVITVGIPFPNVKDL 93
Query: 647 QVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEE 706
QV LK++YND + + LL G +WY QA+RALNQA+GRCIRH+ D+GA+IL+D+RF+
Sbjct: 94 QVELKRQYNDQHSKVRGLLPGRQWYEIQAYRALNQALGRCIRHKNDWGALILVDDRFRSN 153
Query: 707 RNR--AHISKWLRKSIKQYDSFDASLEGLKSF 736
NR + +SKW+R+ I+ Y +F+++LE L F
Sbjct: 154 PNRYISGLSKWVRQLIQHYSTFESALESLAQF 185
>gi|195420017|ref|XP_002060746.1| GK24077 [Drosophila willistoni]
gi|194156831|gb|EDW71732.1| GK24077 [Drosophila willistoni]
Length = 297
Score = 171 bits (433), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 102/308 (33%), Positives = 147/308 (47%), Gaps = 80/308 (25%)
Query: 478 SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTA 537
S+ILTSGTL+P+ +EL + LE PH++D QV +I TGPD +S+K
Sbjct: 11 SVILTSGTLAPLKPLIAELAIPVAQHLENPHIVDQS-QVYVKIIGTGPDRQQFISSFKNR 69
Query: 538 D----------------------------GYKLMEKLCNRWRETGQWSRLNAKKPLFVEP 569
D Y ++ K + W+ +G W+ + AKKP+F+EP
Sbjct: 70 DNPKYISSLGQTILNVSRIVPDGLLVFFPSYPMLNKCVDAWQTSGLWADIAAKKPIFLEP 129
Query: 570 KGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAV 629
+G Q F ++ +Y +I + KGA F+AV
Sbjct: 130 RGKDQ--FTTTMEEFYQAIR------------------------------DSKGACFMAV 157
Query: 630 CRGK---------------IVVGIPFPNINDIQVSLKKKYNDTYRSSKN-LLSGNEWYCN 673
CRGK I+ G+P+P + D +V LK++Y + R+ +N LL+G EWY
Sbjct: 158 CRGKVSEGLDFADRNGRAVIIAGLPYPPLKDPKVILKRRYLEANRTKENQLLTGQEWYNL 217
Query: 674 QAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSI---KQYDSFDASL 730
A RA+N AIGR IRHR DYGAI+L D RFQ+ +SKW+R + Q F +
Sbjct: 218 DATRAVNHAIGRVIRHRHDYGAILLCDSRFQDNSQVQQLSKWIRGHLGARPQCSPFGPIV 277
Query: 731 EGLKSFFR 738
L+ FFR
Sbjct: 278 RELRQFFR 285
>gi|254571493|ref|XP_002492856.1| Conserved nuclear protein required to establish sister-chromatid
pairing during S-phase [Komagataella pastoris GS115]
gi|238032654|emb|CAY70677.1| Conserved nuclear protein required to establish sister-chromatid
pairing during S-phase [Komagataella pastoris GS115]
gi|328353133|emb|CCA39531.1| chromosome transmission fidelity protein 1 [Komagataella pastoris
CBS 7435]
Length = 811
Score = 171 bits (433), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 165/674 (24%), Positives = 288/674 (42%), Gaps = 133/674 (19%)
Query: 146 IFYASRTHSQISQVISEYKKTAY---------RVPMAVLASRKHYCTNKYVRDKENI--- 193
I ++SRTHSQ++Q S+ + T++ + + SRK C N V +++
Sbjct: 188 ILFSSRTHSQLNQFTSQLRLTSFPSSLGAVEEHIKYLPIGSRKQLCINPKVNHYQSLPLL 247
Query: 194 DEECKLLLGDRNLGCPQF---KNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYY 250
+E C L ++ C + N ++ + E+HDIEDL +G+ + C YY
Sbjct: 248 NEAC--LEAQKDSNCKYYDQPNNPQTMQRMQEFRDYTYSEIHDIEDLNGIGESLDICPYY 305
Query: 251 AARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDED 310
+ R ++++ PY ++ R + +D++ +I+I+DEAHN+ D S +
Sbjct: 306 SIRKSIPLSEIISLPYQMLLERNTRQILNIDLRNSIVIVDEAHNLMDTIMALNSTSLSYK 365
Query: 311 VLLKLQMELE--------QVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSC 362
L+ ++ L+ ++ S N + L+++T+ L+ +I+R+K T K
Sbjct: 366 ELIDMRKSLKYYLQKFSTRMNSGNRINCLKLVKLTELLLTYIKRKKETRIK--------- 416
Query: 363 WTGDKA-LRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVITLEGLFSSL 421
G+K L ++ N+ F LE K A E+ + SG
Sbjct: 417 -PGEKLDLMDIFPTNVDINIFQ--LETYLTTSKLAFKVETYMEKCSG------------- 460
Query: 422 TYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTH---------TLSLWCLNPAVVFKDV 472
R+ +H S L+K++ S +P N +L L+P+ +F+D+
Sbjct: 461 -----RHANHASPLLFKLKKFLSSLS-HPSDNGCFFFEVAGDDISLKFLLLDPSEIFQDI 514
Query: 473 AELSLSIILTSGTLSPMNSFSSEL-------GVQFGTCLEAPHVI-DVDLQVLTSVISTG 524
+ S +IL GT+ PM + + L ++ +C H+I +L+V +S G
Sbjct: 515 VDESRCVILAGGTMEPMEDYVNFLFKHTPRNKIKMFSC---DHIIPKNNLKVFA--LSNG 569
Query: 525 PDNYPLNASYKTAD----------------------------GYKLMEKLCNRWRETG-- 554
+ LN S+ + YK +EK+ W+ T
Sbjct: 570 MEGNLLNFSFSNRESPAIIKDLGTSILKIVQCVPGGTVIFFPSYKYLEKVVEHWKLTSPL 629
Query: 555 QWSRLNAKKPLFVEPK-GGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTI 613
WS LN K +F EP G ED VL Y IS+ K + V G I
Sbjct: 630 MWSTLNRLKDIFTEPTDSGKVED---VLSDYSRKISENPKRGAILFSVV---GGKMSEGI 683
Query: 614 ESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKY------NDTYRSSKNLLSG 667
Q++ + RG I+VG+PFPN ++ ++K+ +T +L +
Sbjct: 684 NFQDD----------LARGIIMVGLPFPNAFSGELIARRKFIEDSVLKETNSRKASLQAS 733
Query: 668 NEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFD 727
++Y N R++NQ++GR IRH DY I LLD R+ + +S W+RK + +
Sbjct: 734 KDFYENICMRSVNQSVGRAIRHINDYAVIFLLDNRYNNTNIQQKLSGWIRKRFASF-TMS 792
Query: 728 ASLEGLKSFFRDVK 741
++ + FFR+ K
Sbjct: 793 KAISETEDFFRNRK 806
Score = 53.1 bits (126), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 4/59 (6%)
Query: 28 PYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCKLKN 86
P++PY Q M + T+ G+ L ESPTGTGK+LS++CS ++W + K KN
Sbjct: 7 PFKPYDIQTQLMTAIYDTI----AGGYKVGLFESPTGTGKTLSIICSVMSWLREYKTKN 61
>gi|340385001|ref|XP_003390999.1| PREDICTED: regulator of telomere elongation helicase 1-like,
partial [Amphimedon queenslandica]
Length = 466
Score = 171 bits (432), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 156/515 (30%), Positives = 236/515 (45%), Gaps = 100/515 (19%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ + V FP+ PY Q+ +M +VI L + +A+LESPTGTGK+LSLLC+TL+W+
Sbjct: 12 IENVPVSFPFTPYPCQIEYMEKVIKALQ-----NNTNAILESPTGTGKTLSLLCATLSWR 66
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVK 139
Q QL S+ D ++ D GG
Sbjct: 67 Q------QLPAPVISEWDLQS--DSKGPLGG----------------------------- 89
Query: 140 KKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE--- 196
P I YASRTHSQ+SQ I E K T+YR ++++ SR C N V KE+ E+
Sbjct: 90 ---RPKIIYASRTHSQLSQAIHELKSTSYRPKVSIIGSRDQLCINSEVMSKESNAEKVHA 146
Query: 197 CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHE--VHDIEDLVNVGQVVRGCSYYAARS 254
C + ++ C + NV L++ E + DIE+LV +G + C YY AR
Sbjct: 147 CHAKVAAKS--CTYYNNV-------DLKRLSVPESFIPDIEELVGMGTKNKMCPYYLARE 197
Query: 255 MADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDI------- 307
M +A L+F PY+YI++ R ++I ++ILDEAHNIE + D+ S ++
Sbjct: 198 MKTEADLIFMPYNYILDLRTRLVHGINITNTVVILDEAHNIERVCEDSSSFELTSTDIAH 257
Query: 308 ---DEDVLLKLQME--LEQVCSVNPMIYQPLIEMT--QDLVGWIERRKATLAKREF--QH 358
D D LLK + E E + ++ L ++ ++L IE +L K E ++
Sbjct: 258 CIKDIDYLLKNKYEEAREYLSELDTQTQNTLKDLANLKELFLCIED---SLDKIELKSEN 314
Query: 359 FFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVITLEGLF 418
G L +A I+ + +L++ ++AI T +S L S L+
Sbjct: 315 NECVKPGSYIFEFLGKAGINTETHVVLIDQCSQAIASLTSDQS----LHRTSTY-LQKFL 369
Query: 419 SSLTYFFSRN----GSHVSDYQLALQKYIKRDS---KNPGGNWT---------HTLSLWC 462
++ FS + + L + YIK D+ K WT L WC
Sbjct: 370 EAIKIVFSGSCPVGMTRERMASLHYRVYIKSDNNRKKRKSDVWTTDNNTDDTCRRLCYWC 429
Query: 463 LNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSEL 496
NP ++ + S+ILTSGTLSP+ SF+SEL
Sbjct: 430 FNPGYAMTELVRQGVRSVILTSGTLSPLESFTSEL 464
>gi|449672585|ref|XP_004207744.1| PREDICTED: Fanconi anemia group J protein homolog, partial [Hydra
magnipapillata]
Length = 372
Score = 170 bits (431), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 106/281 (37%), Positives = 138/281 (49%), Gaps = 71/281 (25%)
Query: 444 KRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTC 503
K SK WT+ + CLNPAVVF +V S +IL+SGTLSPM+SF+SELG+ F
Sbjct: 95 KSKSKYLEKVWTYEIKWCCLNPAVVFSEVGRHSRCVILSSGTLSPMSSFASELGIDFPIT 154
Query: 504 LEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTAD------------------------- 538
E H+I D QV S +S GP +NA+Y ++
Sbjct: 155 YEGNHIIS-DSQVWVSTLSVGPSGNVINANYTNSETFLFQDDIGNILLHICEAIPRGILC 213
Query: 539 ---GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCA 595
Y +MEKL RW TG +++A K +F EP+G ++ F+ LK +Y ++
Sbjct: 214 FFPSYHMMEKLHKRWEATGLLDKMSAFKVVFSEPRGNEKKVFDETLKQFYECVTT----- 268
Query: 596 VVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKI---------------VVGIPF 640
+N GA LAVCRGK+ VGIPF
Sbjct: 269 ---------------------DNGKINGALLLAVCRGKVSEGLDFSDDNARAVVAVGIPF 307
Query: 641 PNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQ 681
PN+ D+ V+LK+KYND Y SK LLSGN WY QAFRALNQ
Sbjct: 308 PNVKDLSVTLKRKYNDLY-FSKGLLSGNNWYELQAFRALNQ 347
>gi|302829651|ref|XP_002946392.1| hypothetical protein VOLCADRAFT_30322 [Volvox carteri f.
nagariensis]
gi|300268138|gb|EFJ52319.1| hypothetical protein VOLCADRAFT_30322 [Volvox carteri f.
nagariensis]
Length = 700
Score = 170 bits (431), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 109/340 (32%), Positives = 155/340 (45%), Gaps = 84/340 (24%)
Query: 457 TLSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQ 515
TLS WC P + F+ +A L L S +LTSGTLSPM+SF+ EL + F LE PHVI+ Q
Sbjct: 387 TLSYWCFIPGMAFRRLAALRLRSFLLTSGTLSPMDSFAGELQIPFQVRLENPHVIEPS-Q 445
Query: 516 VLTSVISTGPDNYPLNASYKTADG----------------------------YKLMEKLC 547
V V+ TGP PLN++Y + D Y M+
Sbjct: 446 VWVGVLPTGPSGAPLNSTYASRDSATYKDELGNALVNVARLVPDGLLVFFASYAAMDSAI 505
Query: 548 NRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGN 607
N W++ G GG +E +++H K VV + G
Sbjct: 506 NHWKQNGG--------------AGGVGSTWERIVRH---------KAPVVEPRESSAFGA 542
Query: 608 NDLNTIESQENANKKGASFLAVCRGKI---------------VVGIPFPNINDIQVSLKK 652
++ +GA F AVCRGK+ + GIP+ ND +V LK+
Sbjct: 543 AIEEFRSKLDDPATQGAVFFAVCRGKVSEGLDFSDRAGRAVVITGIPYAVKNDPKVRLKR 602
Query: 653 KYNDTYRSSKNL--------------LSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIIL 698
D ++ L L+G WY N A RA+NQA+GR IRHR+DYGAI+L
Sbjct: 603 DVLD--EEARALSSGSSALAGEGVEPLTGEAWYTNTAMRAVNQAMGRVIRHRYDYGAILL 660
Query: 699 LDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
D+RF+ + ++S+W+R+ + YD F + L FF+
Sbjct: 661 ADDRFRNPNTQRNMSRWVREHVVVYDRFGTASASLTKFFK 700
Score = 150 bits (379), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 101/315 (32%), Positives = 146/315 (46%), Gaps = 70/315 (22%)
Query: 19 HVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
+ GI VEFP++PY Q +M VI L + +ALLESPTGTGK+L LLCSTLAW
Sbjct: 1 QIAGIPVEFPFEPYACQRNYMESVIKALQEGR-----NALLESPTGTGKTLCLLCSTLAW 55
Query: 79 QQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNV 138
+++ K+ T ++ G G
Sbjct: 56 RESLKVGR---------------TSWMSGGAG---------------------------- 72
Query: 139 KKKMTPTIFYASRTHSQISQVISEYKKTAY--RVPMAVLASRKHYCTNKYVRDKENIDEE 196
K P I Y+SRTHSQ++QV+ E + ++Y RV VL+SR+ C +
Sbjct: 73 -KPELPIIIYSSRTHSQLAQVMKELRNSSYKDRVRSTVLSSRQQTCLHPTAN-------- 123
Query: 197 CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGG--------CHEVHDIEDLVNVGQVVRGCS 248
KL G N C + K H L+ G V DIE+LV VG+ C
Sbjct: 124 -KLSGGAANQACKALTSARKCSWHNQLKFGKYRNAAASLVSSVPDIEELVTVGKTHGVCP 182
Query: 249 YYAARSMADDAQLVFCPYSYIINPVIRGAM--EVDIKGAILILDEAHNIEDIARDAGSVD 306
++ R +A +VF PY+Y+++P R M ++ A++I DEAHN+E ++ DA S D
Sbjct: 183 FFLGRDAGKEADIVFLPYNYLLDPATRRTMADSINWNNAVVIFDEAHNVESVSSDACSFD 242
Query: 307 IDEDVLLKLQMELEQ 321
I L +E ++
Sbjct: 243 ITAKQLTDAMLEAKR 257
>gi|219113321|ref|XP_002186244.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209583094|gb|ACI65714.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 614
Score = 170 bits (431), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 176/651 (27%), Positives = 275/651 (42%), Gaps = 124/651 (19%)
Query: 146 IFYASRTHSQISQVISEYKKTAY--RVPMAVLASRKHYCTNKYV---RDKENIDEECKLL 200
I YA+RTHSQ+SQ + E ++TA+ V + L RK C N V + + ++E C L
Sbjct: 4 IIYAARTHSQLSQFVGELRRTAWGDHVRVVALGGRKALCGNAAVARLKSEAAVNEACLDL 63
Query: 201 LGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQ 260
++ CP + V +L V DIE +G+ + C+YYA+R+ A+
Sbjct: 64 QKAKSCNCPLLASKDTV---DTLAMHTLASVTDIEQASQLGKASQTCAYYASRTALAAAE 120
Query: 261 LVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELE 320
+V PYS +++P R A+ + +K +++I+DEAHN+ + R S + V++ LE
Sbjct: 121 VVVLPYSMLLSPQTRSAVGLSLKESLVIVDEAHNLPEALRSLHSCSLSLPVVMA---SLE 177
Query: 321 QVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGD-------------- 366
Q+ L +G I + T F+ F C T +
Sbjct: 178 QLALCTTKYASRLAGRNIYYLGQIRKVLVT-----FRKHFECTTPNHKLEERMVSPGELL 232
Query: 367 -----------KALRELQEANISRQC--FPILL--ECATKAIKEATDTESELP----HLS 407
K LR L+ + ++++ F L+ E K E D + H+S
Sbjct: 233 IELKLDSVNLFKILRYLERSRLAQKLLGFTSLVSTEVQAKTGDEGDDAQETTTGISKHVS 292
Query: 408 GMSVIT--LEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGN-----WTH-TLS 459
MS++ LE L SLT + G V+D S NP N H
Sbjct: 293 AMSLVQNFLEKL--SLT---GQEGKIVTDR--------PGISPNPDHNPRVRQRQHPAFR 339
Query: 460 LWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSE-LGVQFGTCLEA---PHVIDVDLQ 515
L PAV F++V + ++ L GTL P ++E LG Q + A HV+ +
Sbjct: 340 YVLLQPAVFFENVLTEAHALALVGGTLRPFVHVAAELLGNQISSSFAAFSCDHVVSPN-N 398
Query: 516 VLTSVISTGPDNYPLNASY---KTADG-------------------------YKLMEKLC 547
VL GP L+ + KTA Y L
Sbjct: 399 VLLQCHLKGPTGKSLDFRHQQRKTATACNELGATLLHLCRSVPSGMVVFLPSYSYEAHLV 458
Query: 548 NRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGN 607
W+ +G W+ L K ++ EPK SQ D L+ Y +G+ V ++ EG
Sbjct: 459 QHWKRSGIWNDLQKIKSIYREPKQSSQLD--TTLQAYSRDALKGALLFSVIGGKMS-EGI 515
Query: 608 NDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSG 667
N N + R +VVG+P+P+I D ++ K D R+ +SG
Sbjct: 516 NFSNDM----------------ARCVVVVGLPYPDITDPELLEKMAMMD--RAPDKTISG 557
Query: 668 NEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRK 718
+Y N RA+NQ++GR IRH DY A++L D+R+ EER + + WL++
Sbjct: 558 RAYYQNLCMRAVNQSVGRAIRHADDYAAVVLCDQRYSEERIWSALPGWLKR 608
>gi|414886611|tpg|DAA62625.1| TPA: hypothetical protein ZEAMMB73_124196, partial [Zea mays]
Length = 113
Score = 169 bits (428), Expect = 1e-38, Method: Composition-based stats.
Identities = 71/106 (66%), Positives = 93/106 (87%)
Query: 636 VGIPFPNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGA 695
VGIPFPNIND+QV LK++YND+Y+SSK+LLSG+EWYC+QAFRALNQA GRCIRH+ DYG
Sbjct: 1 VGIPFPNINDVQVKLKRRYNDSYKSSKHLLSGSEWYCHQAFRALNQAAGRCIRHKSDYGG 60
Query: 696 IILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFRDVK 741
IIL+DER+Q++RN +ISKWLR +IK+YDSF ++ L+ FF++ +
Sbjct: 61 IILIDERYQDDRNVLYISKWLRNAIKKYDSFQETMAKLQKFFQNAQ 106
>gi|68069879|ref|XP_676851.1| DNA repair helicase [Plasmodium berghei strain ANKA]
gi|56496730|emb|CAH94015.1| DNA repair helicase, putative [Plasmodium berghei]
Length = 939
Score = 169 bits (427), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 154/614 (25%), Positives = 264/614 (42%), Gaps = 145/614 (23%)
Query: 240 VGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIA 299
VGQ + C +YA R + ++ ++ PY+Y+ R +++D++ I+I+DE HNIE++A
Sbjct: 96 VGQNIHFCPFYATREIQNECHVILLPYNYLFEENTRRILKLDLENCIIIIDEGHNIENVA 155
Query: 300 RDAGSVDI-DEDVLLKLQME------LEQVCSVNPMIYQPLIEMTQ---------DLVGW 343
+A S I D D+ L L+ LE+V ++ I Q I + + L+ W
Sbjct: 156 EEAVSFKIRDSDLNLFLESIKATLNILEKVNDIDKEI-QDKINVDELFILNRSINSLITW 214
Query: 344 IE-RRKATLAKREFQHFFSCWTGDKALRELQEANIS---------RQCFPILLECATKAI 393
++ R K++ + + G+K + NI+ ++E K I
Sbjct: 215 LDNERLERNDKKKIKERHKTYEGNKIFDIFENNNINISKSNFENFNNLLSNMIELLNKYI 274
Query: 394 KEATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDY-QLAL--QKYIKRDSKNP 450
+ ++ ++ +++ + T++ + + + FS + +Y QL + +K + DS +P
Sbjct: 275 NDFKLSQIDVKNVNKY-IATIDNVKKAFSILFSDIVKNCIEYFQLYINEEKVLYNDSNDP 333
Query: 451 GGNWTH-----------------------TLSLWCLNP-AVVFKDVAELSLSIILTSGTL 486
+ H T+SL C + A + + E SII+TSGTL
Sbjct: 334 NKVYDHMKKFTKIKTKIGYDNQNNYTMSKTISLLCFSATASLCGIIKEKVNSIIVTSGTL 393
Query: 487 SPMNSFSSELG---VQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPL-------NASYKT 536
SP+ FS +L F LE HVI Q+ ++ + L N +Y
Sbjct: 394 SPVEPFSKQLSGSYFSFHHILENDHVIKSH-QLFVGCMTHYNNQLLLSTYENRSNENYIK 452
Query: 537 ADG--------------------YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQED 576
A G Y M + W++ + ++N+ K +FVEP + D
Sbjct: 453 ALGNCIFDVIAYIPFGVLIFFSSYSSMTETVATWKKLKIFDKINSYKTIFVEPNKAA--D 510
Query: 577 FEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKI-- 634
+ +L Y N +++KKR KGA + VCRGKI
Sbjct: 511 LKDILFQYEN---------IIKKKR--------------------KGAILMGVCRGKISE 541
Query: 635 -------------VVGIPFPNINDIQVSLKKKYNDTYRSS-------------KNLLSGN 668
+ G+P+ N+ D ++ K+++ D ++S N+ GN
Sbjct: 542 GIDFKDDCCRGVIICGLPYGNVYDSKIIFKREFLDNFKSEITESNNYSEKNNDNNISKGN 601
Query: 669 EWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDA 728
+WY +A R++NQ+IGR IRH+ DYGAI+ LD RF + ISKW+R + Y D
Sbjct: 602 KWYNEEAMRSINQSIGRVIRHKDDYGAILFLDSRFSNNQRIKEISKWVRAHFRVYRDIDQ 661
Query: 729 SLEGLKSFFRDVKG 742
++ FF KG
Sbjct: 662 IQNDIEKFFELFKG 675
>gi|395538820|ref|XP_003771372.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein 8
[Sarcophilus harrisii]
Length = 901
Score = 169 bits (427), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 172/718 (23%), Positives = 292/718 (40%), Gaps = 172/718 (23%)
Query: 146 IFYASRTHSQISQVISEYKKTAY--RVPMAVLASRKHYCTNKYVR--------------- 188
I+Y SRTHSQ++Q + E +K+ + + L SR++ C N+ V+
Sbjct: 227 IYYCSRTHSQLTQFVREVQKSPFGKETRLVSLGSRQNLCVNEEVKRLGSATLINDRCLEM 286
Query: 189 ------DKENIDEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQ 242
K DE+ K + + CP F N +++ L+ EV DIE LV +G+
Sbjct: 287 QKSKHEKKNKEDEKAKKRKTETHTSCP-FYNYEQMQ---FLRDEVLMEVKDIEQLVVLGK 342
Query: 243 VVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDA 302
C YY +R AQLV PY +++ R A + ++G ++I+DEAHN+ D
Sbjct: 343 ETHACPYYGSRFAIPSAQLVVLPYQMLLHAATRHAAGIKLQGQVVIIDEAHNLIDSITSI 402
Query: 303 GSVDIDEDVLLKLQMELEQ--------VCSVNPMIYQPLIEMTQDLV----GWIERRK-- 348
S +++ L + +L Q + + N M + ++ + + V G +++
Sbjct: 403 HSAEVNGSQLCQAHSQLSQYMERYRKLLKAKNLMYIKQILYLLEKFVTVLGGNVKQNPNT 462
Query: 349 ----------ATLAKREFQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATD 398
T+ FQ K R +++ +SR+ F E +I ++
Sbjct: 463 QNLCQTGTELKTINDFLFQSQIDNINLFKVQRYFEKSMVSRKLFGFTTEYGGVSILPSSK 522
Query: 399 TESEL----------------------------PHLSGMSVITLEGLFSSLTYFFSRNGS 430
+S+L P G ++ +E ++LT +++G
Sbjct: 523 EQSKLTGFQHFLQSLQPGPGAAPSSAPGEDEGGPPRLGSPLMQIESFLAALTTA-NQDGR 581
Query: 431 HVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMN 490
+ Q +L + +L LNP+V F V + ++I+ GT+ P+
Sbjct: 582 VIVSRQGSLSQ--------------SSLRFLLLNPSVHFAQVVKECRAMIIAGGTMQPVA 627
Query: 491 SFSSEL------GVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTADGYKLME 544
F +L G + HVI D +L V+ +GP N L Y+ + ++M+
Sbjct: 628 DFREQLLECAGVGTERVVEFSCGHVIPPD-NILPIVLCSGPSNQQLEFIYQKRELPQMMD 686
Query: 545 K-------LCN---------------------RWRETGQWSRLNAKKPLFVEPKGGSQED 576
+ LCN W+++G +RL KK +F EP +Q
Sbjct: 687 EVGRILCNLCNVVPGGLVCFFSSYDYLHKIHAHWKQSGLLTRLAVKKKIFQEPNRANQ-- 744
Query: 577 FEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGK--- 633
E VL Y SKC +KR SQ GA L+V GK
Sbjct: 745 VEQVLTEY-------SKC-------IKRC---------SQVKGVMTGALLLSVVGGKMSE 781
Query: 634 ------------IVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQ 681
++VG+P+PNI +++ K Y D + G N +A+NQ
Sbjct: 782 GINFSDDLGRCVVMVGMPYPNIKSLELQEKMAYLDQTLPNN---PGKSLMENLCMKAVNQ 838
Query: 682 AIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFRD 739
+IGR IRHR D+ +I+LLD+R+ A + W+R ++ +F + L+ F R+
Sbjct: 839 SIGRAIRHRQDFASILLLDQRYSRPSILAKLPGWIRDQVEIKTAFGPAFATLRKFHRE 896
Score = 58.2 bits (139), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 52/107 (48%), Gaps = 6/107 (5%)
Query: 21 GGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQ 80
G I FPY PY Q FM + L+ + + ESPTGTGKSLSL+C L+W +
Sbjct: 8 GSIHFPFPYTPYSIQKDFMAELYRVLEAGKI-----GIFESPTGTGKSLSLICGALSWLR 62
Query: 81 NCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQ 127
+ + K Q +H A D L G + +Q ++ P + G+
Sbjct: 63 DFEQKKQQEE-AHLLDTGIAPPDFLEEGPPHMSTNQEASDAPKSTGE 108
>gi|397614354|gb|EJK62748.1| hypothetical protein THAOC_16627, partial [Thalassiosira oceanica]
Length = 1353
Score = 168 bits (426), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 109/316 (34%), Positives = 157/316 (49%), Gaps = 54/316 (17%)
Query: 14 PLNAYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLC 73
P + + GI + FP+QPY Q +M VI+ L +Q HALLESPTGTGK+L LLC
Sbjct: 39 PATSISINGIDIHFPFQPYNVQHQYMSSVITALQASQ-----HALLESPTGTGKTLCLLC 93
Query: 74 STLAWQ--QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQV 131
S LAWQ + ++ +L I + E TD LA P Q
Sbjct: 94 SALAWQIREKSRMSVELEGIQSQQ---EGKTDELA--------------PGPDQSQDGSD 136
Query: 132 AMNNKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYV---- 187
+N +V +K P I YASRTHSQ+SQV+ E + T YR ++L SR+H C + V
Sbjct: 137 EFSNHSVPRKKAPVIIYASRTHSQLSQVMGELRNTRYRPKHSILGSREHSCIHPKVNPIV 196
Query: 188 -----------RDKENIDEECKLLLGDRNLGCPQFKNVHKVRGH------PSLQKGGCHE 230
+ ++ C L +R C N+ +G P++Q+ ++
Sbjct: 197 AKGKGSPGVEPKTSTEVNNGCSKLCKERK--CMFRNNLEDAQGKSGVWLPPTVQRADENK 254
Query: 231 -----VHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAM--EVDIK 283
V DIEDLV +G+ + C +Y +RS +A+L+ PY+Y+ + R EVD
Sbjct: 255 SFEQPVLDIEDLVALGKQHKICPFYHSRSHLKEAELILVPYNYLFDRDARETTLAEVDFS 314
Query: 284 GAILILDEAHNIEDIA 299
A+LI DEAHN+E+ A
Sbjct: 315 NAVLIFDEAHNLEEFA 330
Score = 104 bits (259), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/216 (34%), Positives = 105/216 (48%), Gaps = 33/216 (15%)
Query: 556 WSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSIS-QGSKCAVVRKKRVKREGNNDLNTIE 614
W RL +KK + +EP+ S D + Y I+ S A++ R ++E ++
Sbjct: 670 WQRLLSKKAIVIEPR--STSDLSDAIGEYKKFIALPKSNGAIMMGARFRKESILRVSAQV 727
Query: 615 SQENA-NKKGASFLA-----VCRGKIVVGIPFPNINDIQVSLKKKYNDTYRSS------- 661
S A FL + R +V G+PF D +V LK+++ D R+S
Sbjct: 728 SLRAAIGIDAVQFLITYPDDMARAVVVTGLPFAPYLDPKVKLKREFLDAARASAKSRPST 787
Query: 662 ---------KNL-------LSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQE 705
K+L L G EWY QA RA+NQA+GR IRHR DYGA++LLD RF E
Sbjct: 788 DGGFGSGDIKSLPRAPPKSLGGQEWYSQQAHRAVNQALGRVIRHRHDYGAVLLLDYRFAE 847
Query: 706 ERNRAHISKWLRKSIKQYDSFDASLEGLKSFFRDVK 741
N +SKWL+ +K +S + GL FFR+ K
Sbjct: 848 PGNTNGLSKWLKPHLKN-ESCGSVSRGLVQFFRESK 882
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 63/108 (58%), Gaps = 2/108 (1%)
Query: 442 YIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQF 500
+I + ++ G + T+S WC P++ +++ L++ SI++TSGTLSP+ SFS ELG+ F
Sbjct: 484 HISKVNRGGGFDTGRTISFWCFAPSLAMRELTFLNVRSILITSGTLSPLPSFSMELGLDF 543
Query: 501 GTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTADGYKLMEKLCN 548
LE HVI D Q+ V+ G L++ Y D + +++L +
Sbjct: 544 PVQLENDHVIKPD-QIFVRVLGKGVSGKELSSKYGRRDDPEYIKELGD 590
>gi|297743289|emb|CBI36156.3| unnamed protein product [Vitis vinifera]
Length = 777
Score = 168 bits (425), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 118/339 (34%), Positives = 167/339 (49%), Gaps = 35/339 (10%)
Query: 432 VSDYQLALQKYIKRDSKNPG-GNWTHTLSLWCLNPAVVFKDVAELSLS-IILTSGTLSPM 489
V + L+ K+ NP G + TLS WC NP + ++ A L +S IILTSGTLSP+
Sbjct: 426 VFKVDIRLRSAHKKTKANPNIGKASRTLSWWCFNPGIAMQEFAVLGVSSIILTSGTLSPL 485
Query: 490 NSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTADGYKLMEKLCNR 549
SF+ EL ++F LE PHVI + Q+ V+ GP N+SY+T D + ++L N
Sbjct: 486 ESFAQELKLEFPVRLENPHVISSN-QIWAGVVPAGPSGCSFNSSYRTRDSLEYKQELGN- 543
Query: 550 WRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVK------ 603
++R+ L P E K+ ++ S S R + K
Sbjct: 544 --AIVNFARIVPDGLLVFFPSYYILEQCVGCWKNKSHANSTNSSTIWERICKHKQPVIEP 601
Query: 604 REGNNDLNTIESQENANK----KGASFLAVCRGKI---------------VVGIPFPNIN 644
R+ + ++IE N K GA F AVCRGK+ + GIPF
Sbjct: 602 RQSSLFPSSIEDYMNKLKDSSMSGAVFFAVCRGKVSEGLDFADHAGRAVVITGIPFAMRT 661
Query: 645 DIQVSLKKKYND----TYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLD 700
D +V LK+++ D + + +L+G EWY QA RA+NQA+GR IRH D+GAII D
Sbjct: 662 DPKVRLKREFLDQRGLSQKEGCKVLTGEEWYTQQASRAVNQAVGRVIRHCHDFGAIIFCD 721
Query: 701 ERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFRD 739
ERF ++ IS W++ IK Y F + L FFRD
Sbjct: 722 ERFAHPNRQSQISLWIQPHIKCYSKFGDVVFTLTRFFRD 760
Score = 158 bits (399), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 105/296 (35%), Positives = 147/296 (49%), Gaps = 67/296 (22%)
Query: 18 YHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLA 77
Y + GI V+FP++ Y QLV+M +VI +L C+ALLESPTGTGK+L LLC+TLA
Sbjct: 4 YKIRGIDVDFPFEAYDCQLVYMEKVIQSLQE-----RCNALLESPTGTGKTLCLLCATLA 58
Query: 78 WQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKN 137
W++N +P SQ +
Sbjct: 59 WRKN------------------------------VPHSQSA------------------- 69
Query: 138 VKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYV---RDKENID 194
K PTI YASRTHSQ+ QVI E K+T+YR M VL SR+ C ++ V R + +
Sbjct: 70 --KTNLPTIIYASRTHSQLRQVIQELKRTSYRPKMVVLGSREQLCIHEEVSLLRGRAQTN 127
Query: 195 EECKLLLGDRNLG--CPQFKNVHK-VRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYA 251
C L R C + V ++ +P L + DIEDLVN+G+ C YY
Sbjct: 128 A-CHSLCRKRTKKGYCGHYSRVSDFMKYNPGLGD----DPIDIEDLVNIGRSNGPCPYYV 182
Query: 252 ARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDI 307
+R + ++F PY+Y+I+ R ++ V +ILI DEAHN+E + DA S D+
Sbjct: 183 SRELHKVVDILFAPYNYLIDRGNRKSLSVCWNNSILIFDEAHNLEGLCADAASFDL 238
>gi|358054721|dbj|GAA99647.1| hypothetical protein E5Q_06350 [Mixia osmundae IAM 14324]
Length = 830
Score = 167 bits (424), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 169/673 (25%), Positives = 282/673 (41%), Gaps = 132/673 (19%)
Query: 146 IFYASRTHSQISQVISEYKKTAY--RVPMAVLASRKHYCTNKYVR-----DKENIDEEC- 197
++YASRTHSQ++Q + E +KT++ + L SR C N ++ + E ++E C
Sbjct: 201 VYYASRTHSQLAQFVQEIRKTSFADTTRIVPLGSRASLCINDKLKKACGGNTETLNERCL 260
Query: 198 ---KLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARS 254
K G R P + K+ G + D+EDL ++G+ C YY +R
Sbjct: 261 ELQKAEKGSRCEFLPSQEEEDKMIG---FRDRILATTLDLEDLEDLGRATHVCPYYGSRR 317
Query: 255 MADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDE----- 309
A +V PY+ ++ R ++ + +KG I+I+DEAHN+ D +V I
Sbjct: 318 AIRQAHVVTLPYNMLLQHAARESLGISLKGHIVIIDEAHNLIDTVLSINTVSIASTSISN 377
Query: 310 ---DVLLKLQMELEQVCSVNPMIYQPLIEMTQDL----VGWIERRKATLAKREFQHFFSC 362
V L LQ ++ N + + L+ + + L + W E R+ A E
Sbjct: 378 ALSGVQLYLQRFKTRLKGSNTVYLKQLLAIFRRLEAYCITWSESRQNAKAIEELML---- 433
Query: 363 WTGDKALRELQEANI--------------SRQCFPILLECATKAIKEATDTESELPHLSG 408
KAL E + +I S+ I +A K+A + H
Sbjct: 434 ---PKALMEDLQGSIDQVDLHKLAAYMKTSKIAHKISGYANMQAEKQARAQQKPNKH--- 487
Query: 409 MSVITLEGLFSSLTYFF-----SRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCL 463
V+ + ++ ++ SR+G + DS N +L L
Sbjct: 488 -KVLLVNAVYQIQSFLLALTNPSRDGRIIVSRAA--------DSSNV------SLRYLLL 532
Query: 464 NPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFG--------TCLEAPHVIDVDLQ 515
NPA F+ + + + S+IL GT+SP++ F ++L FG L HV+
Sbjct: 533 NPADSFRSIVDDARSVILAGGTMSPLSDFDNQL---FGHLAADQKPMALSCGHVVPRQ-N 588
Query: 516 VLTSVISTGPDNYPLNASYKTAD----------------------------GYKLMEKLC 547
+ SVI +GP +Y+ D Y ++KL
Sbjct: 589 ISVSVIRSGPTKQDFRFTYENRDNLAMLQDLGSAIATLARVCPAGIVCFVPSYAFLDKLQ 648
Query: 548 NRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGN 607
W+ +G R+ K +F+EPK + D VLK Y + S G+K A++
Sbjct: 649 AVWKSSGMIERIRKNKLIFMEPKTAGEVD--AVLKGYSTANSSGNKGAIL---------- 696
Query: 608 NDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYNDTYRSSKNLL-- 665
+ ++ + A +A R I+VGIP+PN + LK++ + SK
Sbjct: 697 --FAVVGAKLSEGINFADDMA--RAVIIVGIPYPNAASTE--LKERMHHLSAESKKRKEI 750
Query: 666 --SGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQY 723
G++ Y N AFRA+NQ+IGR IRH D+ +I+L+D R+ +A + +W+ ++
Sbjct: 751 TDGGDQLYSNLAFRAVNQSIGRAIRHANDWASILLIDTRYATPALQAKLPQWIASEVQVP 810
Query: 724 DSFDASLEGLKSF 736
+SF L+ F
Sbjct: 811 ESFGLVLQKTARF 823
Score = 51.2 bits (121), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 45/80 (56%), Gaps = 12/80 (15%)
Query: 28 PYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCKLKNQ 87
PY+PY Q M V ++ ++ A++ESPTGTGKSLSL+CSTL+W ++ + Q
Sbjct: 14 PYKPYDIQSDLMRHVYKAIECSR-----PAIVESPTGTGKSLSLICSTLSWLRDNTARAQ 68
Query: 88 L-------ANISHSKPDTEA 100
A ++H+ D A
Sbjct: 69 TVVRADLQAQLAHTLSDEPA 88
>gi|324503421|gb|ADY41490.1| Regulator of telomere elongation helicase 1 [Ascaris suum]
Length = 993
Score = 167 bits (423), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 111/293 (37%), Positives = 158/293 (53%), Gaps = 54/293 (18%)
Query: 19 HVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
+G I VEFPY+PY QL++M +VI TL R+ +A LESPTGTGK+L LLC+T+A+
Sbjct: 5 QIGKISVEFPYEPYDCQLLYMEKVIETLKRS-----FNAALESPTGTGKTLCLLCATIAF 59
Query: 79 QQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNV 138
+ K + IS D AN G P S
Sbjct: 60 TKEMK-----SRIS---------VDATANPQGTTPGS----------------------- 82
Query: 139 KKKMTPTIFYASRTHSQISQVISEYKKTAYR-VPMAVLASRKHYCTNKYVRDKENIDEE- 196
+ P I YASRTHSQ++QV+ E KT Y+ A LASR C N+ V ++N +
Sbjct: 83 ---LYPKIIYASRTHSQLAQVVRELNKTVYKDTKTATLASRDFLCINETVMKEQNSTTKA 139
Query: 197 --CKLLLGDRNLGCPQFKNVHKVRGHPSLQK-GGCH-EVHDIEDLVNVGQVVRGCSYYAA 252
C+ L+ +R C ++ N + + SL+ C+ V DIED+VN+G+ C +Y
Sbjct: 140 LMCRNLVKNRK--C-RYYNEYDRQSKDSLEIIYNCNGMVPDIEDIVNIGKKHSVCPFYRT 196
Query: 253 RSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSV 305
RS+ D+A L+ PY+Y+I+P +R +V +KG I+I DEAHN+E I +A SV
Sbjct: 197 RSLVDEADLLLMPYNYVIDPRLRRMHDVGLKGNIVIFDEAHNLEAICEEAVSV 249
Score = 147 bits (371), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 115/395 (29%), Positives = 186/395 (47%), Gaps = 63/395 (15%)
Query: 457 TLSLWCLNPAVVFKDV-AELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQ 515
TL+ WC +P V + + A SII+TSGTLSP+ +F LGV LE HV D Q
Sbjct: 451 TLNYWCFSPVVAMRYMHARGVRSIIVTSGTLSPLKAFIEVLGVDMRITLENDHVASSD-Q 509
Query: 516 VLTSVISTGPDNYPLNASYK--TADGYKL-----MEKLCN-------------------- 548
V+ + + + + S+K ++D Y L + ++C+
Sbjct: 510 VIGACVYGDDNGLAICGSFKNRSSDAYLLGVGSVIRRICSIVPEGILVFFSSYVLMNTCI 569
Query: 549 -RWRE---TGQ--WSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRV 602
+W+ TG WS + K LFVEPK S+ + +++L + S+ Q + A+ R
Sbjct: 570 RKWKAHNVTGSSPWSEMAQSKKLFVEPK--SKVELKLILAQFRESVHQDNGAALFAVCRA 627
Query: 603 KREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKY------ND 656
K D + ES R +VVG+PF I+D ++ LKK+Y ND
Sbjct: 628 KVSEGIDFSDSES---------------RAVVVVGVPFAPISDPRIQLKKQYLCERRVND 672
Query: 657 TYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWL 716
++S N++SG EWY A RA+NQAIGR +RH+ D+GA++L+D RF + S W+
Sbjct: 673 --KNSTNMMSGEEWYQVDALRAVNQAIGRVLRHKDDFGAVVLVDSRFSAMGPK-RFSSWM 729
Query: 717 RKSIKQYDSFDASLEGLKSFFRDVKGWVGKKMFNGLENSDNDVDHVS--SMDQCKEVTKQ 774
R S+K Y + FF+D GK + NS N V M+ ++ +
Sbjct: 730 RNSLKTYKNVGEFEPLCAKFFKDHGLNPGKPASLVVSNSGNRNGEVKKRKMEADADMAQN 789
Query: 775 NTQELNKSDHSGQNVQSISKYDPFSHQKSQGNFEV 809
+ + ++ + + S+ ++D + + + EV
Sbjct: 790 SKFGIEAANRGHRLLDSLCEFDGLYEKTNNASLEV 824
>gi|167384070|ref|XP_001736798.1| regulator of telomere elongation helicase 1 rtel1 [Entamoeba dispar
SAW760]
gi|165900684|gb|EDR26949.1| regulator of telomere elongation helicase 1 rtel1, putative
[Entamoeba dispar SAW760]
Length = 1030
Score = 167 bits (423), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 169/674 (25%), Positives = 277/674 (41%), Gaps = 161/674 (23%)
Query: 146 IFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEECKLLLGDRN 205
I YASRTHSQ++QV++E KK + VLASR YC +R + D+N
Sbjct: 137 IVYASRTHSQLAQVVNETKKIG-DIKGIVLASRDLYCIYNPIR-----------ICDDKN 184
Query: 206 LGCPQFKNVHKVRGH-------PSLQKG--------GCHEVHD--------IEDLVNVGQ 242
C NV + H P G C V+ +DLV V Q
Sbjct: 185 YWCTAKPNVLETLKHIKPCPYRPFGNDGKVLPNVVMACQAVYKELNGVIKIQDDLVKVCQ 244
Query: 243 VVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEV------DIK--GAILILDEAHN 294
C YY +R ++L+ CPY+++ + IR + ++ DI +L++DEAHN
Sbjct: 245 KHNLCPYYYSRWATKRSKLILCPYNFVTSVSIRHSSDIFLIDENDIHRHEFVLVMDEAHN 304
Query: 295 IEDIARDAGSVDIDEDVLLK----LQMELEQVCSV-----NPMIYQPLIEMTQDLVGWIE 345
+ED D+ + E +L + +Q +++ + + LI + W+E
Sbjct: 305 VEDAFMDSLTFTFTETLLNRTIETIQFHQKRIKQTPENFRSFSLLGELISTIESFSIWME 364
Query: 346 RRKATLAKREFQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPH 405
R E Q + + L ++ + S + + E K + D E PH
Sbjct: 365 NRSLPFKDSE-QCLYGVFEDQAFLPFIERSPSSTRLTEAIFE-YIKLVDNLDDLIQE-PH 421
Query: 406 L----SGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLW 461
L + + +E + + F R +++ + + N +
Sbjct: 422 LIRYVNPFTTQYIEMVLFYIQVF--RTPKLTKFFKIIITE----------RNDLREMLFR 469
Query: 462 CLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQ---FGTCLEAP--------HVI 510
CL+P++ + S+I SGTLSPM + + EL ++ + + +P HV+
Sbjct: 470 CLSPSLPMSLLQREVRSVIFASGTLSPMKAMAQELNIKEHLYKNIIISPGYRMLSTQHVV 529
Query: 511 DVDLQVLTSVIS-------------TGPDNYPLNASYKTA---------------DGYKL 542
V VI T DN + + T Y +
Sbjct: 530 PPS-HVFGRVIGSSSFGKSFIFTKKTSQDNEMIEQAGNTMFRVLSKSPGGGLVFFASYSM 588
Query: 543 MEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRV 602
+ ++ W++ G +++LN K +F+E K + +F+ K Y
Sbjct: 589 LNRVVELWKQQGVYTQLNKLKAIFIESK--DKNEFKKDFKEY------------------ 628
Query: 603 KREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQ 647
+ +K GA FL V RGK I+VGIP+P++ DI
Sbjct: 629 --------------QILSKTGAVFLGVFRGKLSEGIDFGDDMARVVIIVGIPYPSLGDIN 674
Query: 648 VSLKKKYNDTYR-SSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEE 706
V+LK+ YN+ + + LSG+EWY QA RA+NQA+GR IRH DYGA +LLD+R+
Sbjct: 675 VNLKRDYNNQENLKNPDCLSGSEWYSIQALRAVNQAVGRVIRHINDYGAFLLLDKRYSTN 734
Query: 707 RNRAHISKWLRKSI 720
+ +S W++KS+
Sbjct: 735 PVKEMLSGWMKKSL 748
>gi|399218668|emb|CCF75555.1| unnamed protein product [Babesia microti strain RI]
Length = 838
Score = 167 bits (423), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 173/703 (24%), Positives = 297/703 (42%), Gaps = 152/703 (21%)
Query: 146 IFYASRTHSQISQVISEYKKTAYR-------VPMAVLASRKHYCTNKYVRDKEN--IDEE 196
I Y +RTH Q++ I+E+KK Y + +L SR C + + +D
Sbjct: 72 IIYTTRTHGQLNHFINEFKKVPYYDRLREIGINATILGSRDKLCIHSQCSKMKGNALDGY 131
Query: 197 CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMA 256
CK L+ R C + N ++ + + +L +V D+EDL ++G+ C +Y R
Sbjct: 132 CKALVHTRT--CTYY-NGYRSKEYNNLNI--LMDVMDVEDLTSMGKKYGFCPFYVMREAH 186
Query: 257 DDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDE-DVLLKL 315
+ + PY+Y+ IR ++E+D+ AI+I+DEAHNI+D A S +I + DV+ +
Sbjct: 187 KTSNFILMPYNYLFCQTIRDSIELDLNDAIIIIDEAHNIDDFAERVMSFNIYQMDVIRSI 246
Query: 316 QMELEQVCSVNPMIYQ------PLIEMTQDLVGWIERRKATLA-------------KREF 356
+ +VN +Y P + L ++R L+ KR
Sbjct: 247 DFLKRIITTVNEDMYNKEKDDNPYLNKLLSLYATLQRLDCFLSSLDLDNNRMMHKIKRVD 306
Query: 357 QHFFSCWTGD--------KALRELQEANI---SRQCFPILLECATKAIKEATDTESELPH 405
H+ GD L L A + S+ C T + ES +
Sbjct: 307 FHYTVGKVGDDFVIFDTISILNTLTSAILDKNSQNSLEQEFGCLTFIMATKISDESFNKN 366
Query: 406 LSGMSVITLEGLFSSLTYFFSR----NGSHVSDYQLALQKYIKRDSKNPGGNWTH-TLSL 460
++ + + +++ L +SL S+ N H ++ D+ N + + +L
Sbjct: 367 VN-IEIQSIDRLKNSLLQLTSQWLRANCQH-------FYAVLRIDTGNNNNKFMYRSLLF 418
Query: 461 WCLNPAVVFKDVA-ELSLSIILTSGTLSPMNSFSSELG---VQFGTCLEAPHVIDVD--- 513
C+N + F + E ++ILTSGTLSP+++F S + ++F LE H+I D
Sbjct: 419 ECMNASCTFTKLKNEKIRNLILTSGTLSPIDNFISNISGGYIKFPIVLENEHIISSDRVW 478
Query: 514 -------LQVLTSVISTGPDNYP---LNASYKTADGYKLMEKL----------------- 546
L++ N+ L ++Y T ++ + KL
Sbjct: 479 VGCISSKLKIFRERFRDKVGNFEDQQLISTYSTRSSHEYIVKLGILLKLFVKSVPGGILC 538
Query: 547 -----------CNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCA 595
W+ TG + L + K +F+E
Sbjct: 539 FFPSYTNMNETIEVWKNTGIYHNLYSYKLIFIE--------------------------- 571
Query: 596 VVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKI---------------VVGIPF 640
VV+ +++LN+ ++ ++ +GA F AV RGKI + GIP+
Sbjct: 572 VVKSTDSNDSIDDNLNSFKNVVDSG-RGALFFAVFRGKIAEGVDFPNDYCRGIFICGIPY 630
Query: 641 PNINDIQVSLKKKY-NDTYRSSKNLLSG-----NEWYCNQAFRALNQAIGRCIRHRFDYG 694
PN +D +VSLK Y +T +S ++++ W+ A +A+NQA+GRCIRH DYG
Sbjct: 631 PNPHDFRVSLKMNYIRNTQNNSTDVVNALRDGTYNWHVLSAIKAVNQAMGRCIRHADDYG 690
Query: 695 AIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFF 737
AI+L D R++ + + +SKW+ KS++ + A L FF
Sbjct: 691 AILLADVRYEYKNIQVQLSKWVLKSLEIFSDTVALSNSLDKFF 733
Score = 57.8 bits (138), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 42/63 (66%), Gaps = 5/63 (7%)
Query: 16 NAYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCST 75
N V GI V+FPY+ Y Q + + +I +++ Q +AL+ESPTGTGK+L LLC++
Sbjct: 4 NVVSVLGIDVQFPYKIYEPQKLLIEAIIRSIEYGQ-----NALIESPTGTGKTLCLLCAS 58
Query: 76 LAW 78
LA+
Sbjct: 59 LAY 61
>gi|223997568|ref|XP_002288457.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220975565|gb|EED93893.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 746
Score = 167 bits (423), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 107/291 (36%), Positives = 149/291 (51%), Gaps = 37/291 (12%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ +QV FP++PY Q +M V++ L + HALLESPTGTGK+L LLCS LAWQ
Sbjct: 1 INNLQVHFPFRPYDVQTQYMKSVLNALQSSN-----HALLESPTGTGKTLCLLCSALAWQ 55
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVK 139
Q K K + + + + P + L+ G +G + N
Sbjct: 56 QGEKAKIRTSGVIATAPTVQPTGGDLSQNDG--------------DGNAPALRTNK---- 97
Query: 140 KKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYC----TNKYVRDKENIDE 195
P I YASRTHSQ+SQV+ E K T YR AVL SR+H C N V ++
Sbjct: 98 ---LPVIIYASRTHSQLSQVVRELKNTRYRPKHAVLGSREHMCVHPKVNPLVAKAKSSAN 154
Query: 196 ECKLLLGDRNLGCPQFKNVHKVRGHPSLQK---GGCHE--VHDIEDLVNVGQVVRGCSYY 250
+ + N GC + K +L + GG +E V D+EDLV VG+ + C +Y
Sbjct: 155 AAPVSSSEVNHGCNKLNKERKCMFRNNLDEVLAGGEYEQPVLDMEDLVTVGKQYKVCPFY 214
Query: 251 AARSMADDAQLVFCPYSYIINPVIRGAM--EVDIKGAILILDEAHNIEDIA 299
RS+ DA+L+F PY+Y+ + R + EVD A+LI DEAHN+E+ A
Sbjct: 215 HTRSLIKDAELIFVPYNYLFDRDARESTLAEVDFANAVLIFDEAHNLEEFA 265
Score = 155 bits (391), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 105/332 (31%), Positives = 162/332 (48%), Gaps = 57/332 (17%)
Query: 457 TLSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQ 515
T+S WC PA+ ++++ L + SI++TSGTLSP+ SFS ELG+ F LE HVI D Q
Sbjct: 425 TISYWCFAPALAMRELSFLKVRSILITSGTLSPLPSFSLELGLDFPVQLENDHVIQSD-Q 483
Query: 516 VLTSVISTGPDNYPLNASYKTADG--YKL-----MEKLC--------------------- 547
+ V+ G L++ + D Y L + LC
Sbjct: 484 IFVRVLGKGVSGKELSSKFGRRDDPEYILELGNTLGSLCRNIPGGVLVFFPSYSAMYNCI 543
Query: 548 -NRWRETGQ----WSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRV 602
N + T + W RL +K + +EP+ S I + ++ + C + R
Sbjct: 544 ENHFMTTSETSTPWKRLLTRKAIVIEPRSTSDLSDAIAEFKRFIALPKSPGCFLFGICRG 603
Query: 603 KREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYNDTYRSSK 662
K D + +CR +V G+PF D +V LK+++ D R+S+
Sbjct: 604 KVSEGIDFSD---------------DMCRAVVVTGLPFAPYLDPKVKLKREFLDAARASE 648
Query: 663 ------NLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWL 716
+ LSG EWY QA RA+NQAIGR IRHR DYGA++LLD RF ++ NR +SKW+
Sbjct: 649 KARPVPSTLSGAEWYNQQAHRAVNQAIGRVIRHRNDYGAVLLLDHRFAQQSNRDGLSKWI 708
Query: 717 RKSIKQYDSFDASLEGLKSFFRDVKGWVGKKM 748
R ++ ++ + GL F+++ K G+++
Sbjct: 709 RPYLRD-ETVGTATRGLVQFYKESKQKAGERI 739
>gi|308499977|ref|XP_003112174.1| hypothetical protein CRE_29819 [Caenorhabditis remanei]
gi|308268655|gb|EFP12608.1| hypothetical protein CRE_29819 [Caenorhabditis remanei]
Length = 385
Score = 167 bits (422), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 103/290 (35%), Positives = 149/290 (51%), Gaps = 47/290 (16%)
Query: 25 VEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCKL 84
V+FP++PY Q +FM V+ LDR A LESPTGTGK+LSLLCSTLAW Q K
Sbjct: 21 VKFPFEPYECQRIFMKNVVDVLDR-----KLDAALESPTGTGKTLSLLCSTLAWVQKQK- 74
Query: 85 KNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKKMTP 144
KP + GG E + +K P
Sbjct: 75 --------EIKPLDFSTWQSSGAGGAEKTEEK---------------------LKNSFIP 105
Query: 145 TIFYASRTHSQISQVISEYKKTAYR-VPMAVLASRKHYCTNKYVRDKENIDEE---CKLL 200
TIFYASRTHSQ+ QV+ E +T Y+ V +L SR+H+C N+ V+ + + + C+ L
Sbjct: 106 TIFYASRTHSQLEQVVHELNRTEYKWVKTTILGSREHFCINQKVKKIKESNRQSHVCRGL 165
Query: 201 LGDRNLGCP---QFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMAD 257
+ R C +F + + + L KG + DIED V +G C Y+ +R ++
Sbjct: 166 VSKR--ACHYYNKFDAMTTDKMNEVLDKG---DAMDIEDFVKLGTQNSLCPYFMSRQRSE 220
Query: 258 DAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDI 307
A+L+ PY+YII+P +R ++D+K +I+I DEAHN+E I S ++
Sbjct: 221 TAELILLPYNYIIDPKMRRRYKLDLKNSIVIFDEAHNLESICESNASAEL 270
>gi|390367138|ref|XP_792082.3| PREDICTED: probable ATP-dependent RNA helicase DDX11-like
[Strongylocentrotus purpuratus]
Length = 792
Score = 167 bits (422), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 182/708 (25%), Positives = 289/708 (40%), Gaps = 137/708 (19%)
Query: 146 IFYASRTHSQISQVISEYKKTAYR--VPMAVLASRKHYCTNKYVRDKENIDEECKLLLGD 203
IFY SRTHSQ+SQ + E +K+ Y V + L SR++ C N+ V+ ++ L+ D
Sbjct: 101 IFYCSRTHSQLSQFVHEVQKSPYHDDVKVVTLGSRQNLCINEAVKKLRSMT-----LIND 155
Query: 204 RNL------------------------------GCPQFKNVHKVRGHPSLQKGGCH-EVH 232
R L CP F +G SL K EV
Sbjct: 156 RCLEMQSKKKPAAKKDDDSTTKPKRKRSKQSLKACPHFS-----QGQLSLYKDRVAVEVM 210
Query: 233 DIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEA 292
D+E L VG+ ++ C YY R +AQLV PY+ +++ R A +++KG I+I+DEA
Sbjct: 211 DMEQLGKVGKELKACPYYGTRYAVPNAQLVVLPYNILLHKSTRKACRINLKGNIVIIDEA 270
Query: 293 HNIEDIARDAGSVDIDEDVLLKLQMELEQ--------VCSVNPMIYQPLIEMTQDLVGWI 344
HN+ + + SV++ L + +L Q + + N M + L+++ V +
Sbjct: 271 HNLIETICNVHSVEVTGAQLCRAHSQLSQYMQKFKSRLLAKNLMYIKQLLQILSSWVRQL 330
Query: 345 ERRKATLA---KREFQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDT-- 399
R + K S +T + L E Q NI+ F + C I +
Sbjct: 331 GGRTDSAPDSQKLSGSGSTSVFTINNFLFETQMDNIN--LFKLQRYCQKSQISRKLNGFV 388
Query: 400 -----------ESELPHLSGMSVI-----------------TLEGLFSSLTYFFSRNGSH 431
+ E P SGM+ T + T+ FS H
Sbjct: 389 ERYQPLSVKVHQPEKPKGSGMTQFLHQISKRDQAPSQNQPPTPDKSGDDETHVFSSPLMH 448
Query: 432 VSDYQLALQKYIK--RDSKNPGGNWTH-TLSLWCLNPAVVFKDVAELSLSIILTSGTLSP 488
+ + LAL K R N + +L LNPAV F DV + + +II+ GT+ P
Sbjct: 449 IEGFLLALTNANKDGRVVVNKKELVSQCSLRFQLLNPAVHFTDVVKEARAIIVAGGTMQP 508
Query: 489 MNSFSSEL----GVQFGTCLE--APHVIDVDLQVLTSVISTGPDNYPLNASYKTADGYKL 542
+ F +L GVQ LE HVI + +L +S GP L+ +Y+ D ++
Sbjct: 509 VEDFKHQLFVCTGVQPERILEFSCGHVIPPE-HLLPISLSKGPTGLELDFTYQHRDLPQM 567
Query: 543 ME----------------------------KLCNRWRETGQWSRLNAKKPLFVEPKGGSQ 574
M+ ++ W G +RL +K ++ EP+ +Q
Sbjct: 568 MDEVGRILVNISNIVPGGVVCFFPSYDYEKQIYQYWESHGVLTRLGHRKKIYREPRKANQ 627
Query: 575 EDFEIVLKHYYNSISQG-SKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLA-VCRG 632
D VL Y +I + S C + G N +G +F + R
Sbjct: 628 VD--QVLGQYSATIEKACSGCTL--------SGLNGAMLFCVVGGKMSEGINFSDNLGRC 677
Query: 633 KIVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLS-GNEWYCNQAFRALNQAIGRCIRHRF 691
++VG+P+ NI ++ K Y + N S G Y N +A+NQ+IGR IRH+
Sbjct: 678 IVMVGLPYANIKSPELKEKMDYLNANMPQINGRSAGQVHYDNLCMKAVNQSIGRAIRHKG 737
Query: 692 DYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFRD 739
DY +++LLD R+ R+ + W+ + + F + + FF D
Sbjct: 738 DYASMLLLDHRYTRPSIRSKLPAWISERLLVASRFGPAFASINKFFVD 785
>gi|405976070|gb|EKC40591.1| Putative ATP-dependent RNA helicase DDX11 [Crassostrea gigas]
Length = 921
Score = 166 bits (421), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 174/696 (25%), Positives = 295/696 (42%), Gaps = 129/696 (18%)
Query: 146 IFYASRTHSQISQVISEYKKTAYRVPMAVLA--SRKHYCTNKYVRDKENI---DEECKLL 200
I+Y SRTHSQ++Q + E K+ Y VL+ SR++ C N VR ++ ++ C L
Sbjct: 244 IYYCSRTHSQLAQFVREIIKSPYGSNTRVLSLGSRQNMCVNDEVRKLNSLSMMNDMCLDL 303
Query: 201 LGDRNLGCPQFKNVHKV-RGHPSLQKGGC----------------HEVHDIEDLVNVGQV 243
+++ G + ++ V + L GC EV D+E +V G+
Sbjct: 304 QKNKSKGTEKKESDEAVQKKRKKLGSNGCPFYKQETMEDLGNQILTEVTDMEQIVISGRR 363
Query: 244 VRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAG 303
++ C YY +R A++V PY+ +++ +R A + ++G I+++DEAHN+ +
Sbjct: 364 MKACPYYTSRLSLPLAEVVVLPYNILLHKAMREASGIRLEGNIVLIDEAHNLLETINAVY 423
Query: 304 SVDIDEDVLLKLQMELEQVCS----VNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHF 359
SV I L K +L Q S N + + ++ + L+ ++E R +R +
Sbjct: 424 SVMITGAQLSKAHSQLSQFRSRLKAKNLLYVKQILFVLNCLLRFLEGRTDNKKQRSEKSE 483
Query: 360 FSCWTGDKALRELQEANISRQCFPILLECATKAIK---------------EATDTESELP 404
T ++ L + NI+ F IL C I + D E
Sbjct: 484 SKVLTVNQFLSDSGFDNIN--LFKILQYCRKSQISKKLNGFVEKYANCEVQIADKPKENV 541
Query: 405 HLSGM-------------------------SVITLEGLFSSLTYFFSRNGSHVSDYQLAL 439
+SG + + + + FF+ S D ++ L
Sbjct: 542 GISGFLKEIAQTKENLVEETQTTDNTRQSEKAVVMRSPLAHIEGFFASLTSADKDGRIVL 601
Query: 440 QKY-IKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGV 498
++ + ++S TL +NPAV FKDV + S+++ GT+ P+ F +L
Sbjct: 602 TRHTLLKES---------TLKFLQMNPAVHFKDVLSQARSVVVAGGTMQPVEEFKQQLFY 652
Query: 499 QFGTCLE------APHVIDVDLQVLTSVISTGPDNYPLNASYKTADGYKLMEKL------ 546
G E HVI D +L + +GP + ++ + + L+ +L
Sbjct: 653 AAGIGPENIHEYSCGHVIPSD-HLLALAMKSGPLGVDFDFTFSSRENSALLNELGLVISN 711
Query: 547 -CN---------------------RWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHY 584
CN W ++G ++L KK +F EPK SQ E VL Y
Sbjct: 712 VCNIIPGGVVCFFPSYKYQHLVYQHWNKSGILAKLEKKKKIFQEPKLSSQ--VEQVLGEY 769
Query: 585 YNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNIN 644
SI +G VK G L + + + + L C I+VG+P+PNI
Sbjct: 770 SKSIQKG----------VKGTGAILLCVVGGKMSEGINFSDDLGRCV--IMVGMPYPNIM 817
Query: 645 DIQVSLKKKY-NDTYRSSKN-LLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDER 702
++ K +Y N + K+ L G Y N +A+NQ+IGR IRH DY I+LLD+R
Sbjct: 818 SPELQEKMQYLNSNFPKDKDGHLPGQIHYENLCMKAVNQSIGRAIRHSQDYATILLLDKR 877
Query: 703 FQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
+ E R+ + W+ K +++ D + S+ + FF+
Sbjct: 878 YCRESVRSKLPTWIAKDLQRMDKYGPSMAAISKFFQ 913
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 31/52 (59%), Gaps = 5/52 (9%)
Query: 27 FPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
FP++PY Q FM + L++ Q + ESPTGTGKSLSL+C L W
Sbjct: 36 FPFKPYDVQKKFMENLYLCLEKGQV-----GIFESPTGTGKSLSLICGALKW 82
>gi|47212324|emb|CAF91262.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1212
Score = 166 bits (420), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 99/289 (34%), Positives = 150/289 (51%), Gaps = 34/289 (11%)
Query: 22 GIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQN 81
G+ V+FP+ PY Q +M +VI L++ + +LESPTGTGK+L LLCS LAW++
Sbjct: 8 GVTVQFPFAPYACQREYMRKVIECLEQ-----KTNGVLESPTGTGKTLCLLCSALAWREQ 62
Query: 82 CKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKK 141
K K + + + LA+ G A + +
Sbjct: 63 LKDKISSKMMERRLGGETSHSTGLASWGS--------------------AAADGEAAYYT 102
Query: 142 MTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE---CK 198
P I YASRTHSQ++QVI E K TAYR + VL SR+ C N V +E+ + C+
Sbjct: 103 DIPKIIYASRTHSQLAQVIKELKNTAYRPKICVLGSREQLCINPEVMRQESSHVKVHMCR 162
Query: 199 LLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADD 258
+ R+ CP + N + S + H + D+EDLV G R C YY +RS+ +
Sbjct: 163 KKVSTRS--CPFYNNTEES----STDRDLTHSILDVEDLVKFGNKKRVCPYYLSRSLKQE 216
Query: 259 AQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDI 307
A ++F PY+Y+++P R A +++ GA++I DEAHN+E ++ S D+
Sbjct: 217 ADVIFMPYNYLVDPKSRRAHNIELNGAVVIFDEAHNLEKTCEESTSFDL 265
Score = 145 bits (367), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 119/399 (29%), Positives = 162/399 (40%), Gaps = 146/399 (36%)
Query: 458 LSLWCLNPAVVFKDVAELSLS-IILTSGTLSPMNSFSSEL-------------------- 496
LS WC +P +D+ + +ILTSGTLSP++SF+SE+
Sbjct: 435 LSYWCFSPGFSMQDLVNQGVRCVILTSGTLSPLDSFTSEMRIDFPVRLENGHVIERDQIF 494
Query: 497 ---------GVQFGTCLEAPHVIDVDLQVLT---------SVISTG---PDNYP------ 529
GVQ + + ++ D+ LT S+ G P+N
Sbjct: 495 VSVVDRGPDGVQLSSAFDRRFLLHPDMLHLTGSQAQLRSLSLFFCGRFLPENMASLGNTV 554
Query: 530 LNASYKTADG-------YKLMEKLCNRWRETGQ------W---------------SRLNA 561
N S G + LMEK+ + WR +G W R++A
Sbjct: 555 ANLSRVVPHGLLVFFPSFPLMEKVLDFWRVSGDGGSPASWCESSSPLAPQAHGHAERIDA 614
Query: 562 KKPLFVEPKG--------GSQED---FEI--VLKHYYNSISQGSKCAVVRKKRVKREGNN 608
KP+FVEPKG G E F I V+ YYN + N
Sbjct: 615 LKPIFVEPKGKANFSEASGRAETDSLFSISQVMDGYYNKV-------------------N 655
Query: 609 DLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKK 653
D T KG SF AVCRGK ++ G+PFP D +V LK +
Sbjct: 656 DPQT---------KGGSFFAVCRGKASEGLDFADAFGRAVVITGLPFPPRMDPRVILKMQ 706
Query: 654 YNDTYRSSKN--------------LLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILL 699
+ D +SK LSG +WY QAFRA+NQA+GR IRHR D+GAI L
Sbjct: 707 FLDEMNASKTSKMKPAVAFRVLVQFLSGQQWYRQQAFRAVNQAVGRVIRHRHDFGAIFLC 766
Query: 700 DERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
D RF+ RA + WL+ + DSF + + + FFR
Sbjct: 767 DHRFKNPEARAQLPSWLKPCVHLCDSFGSVIRDVSKFFR 805
>gi|412985226|emb|CCO20251.1| regulator of telomere elongation helicase 1 [Bathycoccus prasinos]
Length = 1313
Score = 166 bits (419), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 119/352 (33%), Positives = 171/352 (48%), Gaps = 69/352 (19%)
Query: 444 KRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGT 502
KR +K P T+S WC+ P V+ ++ EL + S++L SGTLSPM+SF+SEL F
Sbjct: 556 KRLAKGP------TMSFWCMVPGVIVNELCELGVKSLLLASGTLSPMDSFASELRAPFPV 609
Query: 503 CLEAPHVIDVDLQVLTSVISTGPDN-YPLNASYK---------------------TADG- 539
LE PHVI + V GP N LN+SY+ T DG
Sbjct: 610 RLENPHVIPQE-NVWAGAFLKGPSNAVSLNSSYRFRDTEQYKNELGLLILRVARVTPDGV 668
Query: 540 ------YKLMEKLCNRWR-ETGQWSRL--NAKKPLFVEPKGGSQEDFEIVLKHYYNSISQ 590
Y +M K W+ T W+ + KK L VEPK + D + +N +
Sbjct: 669 LVFFPSYGVMAKCIEFWKTRTSIWNDIARTTKKTLVVEPK---ESDAFLEAFESFNKALE 725
Query: 591 GSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGK---------------IV 635
SK K + + + + A K GA FLAVCRGK I+
Sbjct: 726 RSKTNSWSKVGLTNTDGSAKDDETAVTLAAKGGAMFLAVCRGKVSEGIDFADKAGRAVIL 785
Query: 636 VGIPFPNINDIQVSLKKKY----------NDTYRSSKNLLSGNEWYCNQAFRALNQAIGR 685
GIP+ +V K+++ N+T++S N+ SG +WY A RA NQAIGR
Sbjct: 786 TGIPYAPKASARVRYKREFLDAAIMVHKRNNTHQSC-NITSGEQWYSQTAMRATNQAIGR 844
Query: 686 CIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFF 737
IRH+ D+GA+IL DERF +++ +S WLR +++ +D+F+ +E L +FF
Sbjct: 845 VIRHKDDFGAVILADERFAYRNHQSQLSLWLRPAMQTFDTFERGIESLSAFF 896
Score = 79.3 bits (194), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 91/170 (53%), Gaps = 27/170 (15%)
Query: 25 VEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCK 83
V+FP+ +PY SQ+V M +++ L R+G +ALLESPTGTGK++ LLC+TLA+ ++ +
Sbjct: 26 VKFPFPEPYPSQIVMMEKILFAL----REG-TNALLESPTGTGKTVCLLCATLAFAEH-E 79
Query: 84 LKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKKMT 143
K ++ + K +T+ D + + K VK++ T
Sbjct: 80 EKQRIKQKNTKKKNTKKRKD--------------TEKEEKEEKEEDLELKRTKGVKEEYT 125
Query: 144 P------TIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYV 187
TI Y SRTHSQ+ QVISE K T Y +V+ SRK C N++V
Sbjct: 126 GGEPSKVTIVYVSRTHSQLQQVISELKATEYAPRSSVVGSRKQLCVNEWV 175
Score = 67.4 bits (163), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 48/82 (58%), Gaps = 5/82 (6%)
Query: 231 VHDIEDLVNVGQVVRG-CSYYAARSMADDAQLVFCPYSYIINPVIR----GAMEVDIKGA 285
+ DIEDLV G+ G C YY AR M A+++F PYSYI++ +R G ++ +
Sbjct: 293 IMDIEDLVKEGKRANGPCPYYLAREMTRGAEIIFAPYSYILDAGVRKRALGDTVMNWHNS 352
Query: 286 ILILDEAHNIEDIARDAGSVDI 307
I+I DEAHN E +A S D+
Sbjct: 353 IVIFDEAHNAESACEEAASRDL 374
>gi|444313385|ref|XP_004177350.1| hypothetical protein TBLA_0A00310 [Tetrapisispora blattae CBS 6284]
gi|387510389|emb|CCH57831.1| hypothetical protein TBLA_0A00310 [Tetrapisispora blattae CBS 6284]
Length = 893
Score = 165 bits (418), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 152/663 (22%), Positives = 288/663 (43%), Gaps = 108/663 (16%)
Query: 146 IFYASRTHSQISQVISE--------------YKKTAYRVPMAVLASRKHYCTNKYVRDK- 190
I++ SRTHSQ++Q S+ + T ++ LASRK C N + K
Sbjct: 266 IYFTSRTHSQLNQFASQLDLINSKFKSSFEKFDITKEKIKYLPLASRKQLCINSKITSKY 325
Query: 191 ---ENIDEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGC 247
E+I+E C L+ + GCP ++N V+ + +HDIED+ +G+ ++ C
Sbjct: 326 NTVESINEACIDLINSKE-GCPYYENYKLVQNQSNFTNHLFTSIHDIEDMFQLGKSLKTC 384
Query: 248 SYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDI 307
YY +++ ++++++ PY Y+++ R ++ +D+K +I+I+DEAHN+ D S I
Sbjct: 385 PYYTSKTSIENSEIITLPYQYLLSQSTRLSLNIDLKDSIVIIDEAHNLIDTINSIYSSKI 444
Query: 308 DEDVLLKLQMELEQVCSVNPMIYQP--------LIEMTQDLVGWIER--RKATLAKREFQ 357
L+K++ L + P ++++ L+ +I + + K +
Sbjct: 445 LLSDLIKIKTGLNSYLKKFKLKLNPGNRINLLKILKLANILIEFILYYPKDSKNIKIDPM 504
Query: 358 HFFSCWTGDKA-LRELQE-ANISRQCFPILLECATKAIKEATDTESELPHLSGMSVITLE 415
FF D + +LQ+ IS+ + I E + + P + + L
Sbjct: 505 DFFEGSNADILNIHKLQKYIKISKISYKI--EAFIQNSNANNSNIANSPSTTSPVLFKLS 562
Query: 416 GLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAEL 475
SSL+ N S+ + + L++ ++++ L P F+ +
Sbjct: 563 KFLSSLS-----NPSNEGQFFIDLKE--------------NSINYMLLEPFHPFQSIIND 603
Query: 476 SLSIILTSGTLSPMNSFSSELGVQFG----TCLEAPHVIDVDLQVLTSVISTGP------ 525
+ IIL GT+ P+N F L + + H+I D LT+ I P
Sbjct: 604 AKCIILAGGTMEPINDFVDNLLINIPKGQISTFACNHIIPDD--YLTTFIINNPIFDFTF 661
Query: 526 ---------DNYPLNASYKTAD-------------GYKLMEKLCNRWRETGQWSRLNAK- 562
+N N K ++ Y ++ + + W++ + +++
Sbjct: 662 AKRSNLNLINNELFNFFIKLSNQTPKNGGIVAFFPNYDYLKLIIDNWQKINIFDKIDKNI 721
Query: 563 KPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKK 622
+P+F E K G +L+ Y S+ SK A + G L +I + + +
Sbjct: 722 RPIFFETKDGPD-----ILQDYITSVENSSKIA-------SKLGAGILFSIVGGKLS--E 767
Query: 623 GASFL-AVCRGKIVVGIPFPNINDIQVSLKKKY--NDTYRSSKNLLSGNE----WYCNQA 675
G +F +CR ++VG+P+PNI ++ +KK + + ++ + NE +Y N
Sbjct: 768 GINFQDNLCRAVVMVGLPYPNIFSNEMLIKKNHLKDKILKNGGTINQVNEKTKLFYENIC 827
Query: 676 FRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKS 735
+A+NQ++GR IRH+ D+ I LLD R+ + + +S W+RK + D +
Sbjct: 828 MKAVNQSVGRAIRHKDDFANIYLLDRRYATDAIKLKLSNWVRKRVIISSKIDEVMHQTNL 887
Query: 736 FFR 738
FF+
Sbjct: 888 FFK 890
Score = 48.5 bits (114), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 35/56 (62%), Gaps = 4/56 (7%)
Query: 28 PYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCK 83
P+ PY QL M + +L ++ ++ESPTGTGK+LSL+CSTL + ++ K
Sbjct: 29 PFHPYDIQLQLMTFLYDSLFLEKK----VLIVESPTGTGKTLSLICSTLTYLRDIK 80
>gi|402080753|gb|EJT75898.1| DEAD_2 domain-containing protein [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 936
Score = 165 bits (417), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 193/750 (25%), Positives = 299/750 (39%), Gaps = 194/750 (25%)
Query: 146 IFYASRTHSQISQVISEYKKT----------------------AYRVPMAVLASRKHYCT 183
IFY SRTHSQ+SQ ISE ++ A V L+SR+ C
Sbjct: 217 IFYTSRTHSQLSQFISELRRPNFPPSFPNPSAGADQGQADGSQAECVKHIPLSSRQRLCI 276
Query: 184 NKYVR---DKENIDEECKLLL----GDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIED 236
N V I++ C L G + CP N + + + DIED
Sbjct: 277 NPAVARLGSVSAINDRCAELQTPKSGSKGNKCPFVPNQENLGETHEFRDTALATLPDIED 336
Query: 237 LVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIE 296
+G+ +R C YYA R+ A+++ PY ++ R A +D+KG+++++DEAHNI
Sbjct: 337 AHRLGKSLRVCPYYATRTAIPGAEIITLPYPLLLQRSAREAFGIDLKGSVVVIDEAHNIM 396
Query: 297 DIARDAGSVDIDEDVLLKLQMEL--------EQVCSVNPMIYQPLIEMTQDLVGWIERRK 348
D + ++ L + + L +++ N ++ + Q L W+ER
Sbjct: 397 DAVAGVHAAEVRLGDLRRAREMLSVYAKRFGKKLKGENRIMVGQVARAVQGLSEWLER-- 454
Query: 349 ATLAKREFQHFFS--CWTGDKALREL---------QEANISR--QCFPILLE--CATKAI 393
TL R Q K + ++ QE+ ++ + + L+ A A
Sbjct: 455 -TLEARTEQGIVDPRVLLKTKGMDQMDMFALVGYIQESKLAFKIESYATRLDEKKAEAAG 513
Query: 394 KEATDTESELPH-LSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGG 452
K+AT S + H LSG ++ L L S FF R +P
Sbjct: 514 KQATTRSSPVLHSLSGF-LLALTNLSSEGRIFFER-----------------LPPASPAD 555
Query: 453 NWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFG----TCLEAPH 508
LS L+P F +A + +I+L GT+SP + + L T L H
Sbjct: 556 KADIKLSYLLLSPTHAFSSIASSARAIVLAGGTMSPFQDYETHLFPMHPPAKITTLSCGH 615
Query: 509 VI---DVDLQVLTSV-------ISTGPDNYP-------------------LNASYKTADG 539
VI ++ + L+S+ TG D + LN DG
Sbjct: 616 VIPPSNLCVWTLSSMRPGPAAAKGTGNDVFDFSFQKRRDKNMIQQLGTAILNTCSVVPDG 675
Query: 540 -------YKLMEKLCNRWRE-----TGQ---WSRLNAKKPLFVEPKGGSQEDFEIVLKHY 584
Y ++++ W+E TG W RL AKK +F E KGGS E+ VL++Y
Sbjct: 676 VVVFFPSYGYLDEVIASWKERPSGPTGPPPIWDRLQAKKAVFRESKGGSSEE---VLQNY 732
Query: 585 YNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGK----------- 633
++I G++ A K K E NN + GA L+V GK
Sbjct: 733 TSAILGGAEDAKASAK--KTEPNNTAQS----------GALLLSVVGGKMSEGINFSDRL 780
Query: 634 ----IVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSG---------------------- 667
++VG+P+PNI + + +Y ++ S+ + L G
Sbjct: 781 GRCVVIVGLPYPNIASPEWKARMEYIES--STVDRLLGKQQQQQQQQQSTQAAGMTREQA 838
Query: 668 --------NEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKS 719
E+Y N RA+NQ+IGR IRHR DY AI+LLD RF +R R + W+R
Sbjct: 839 AAAGKQAAREFYENACMRAVNQSIGRAIRHRGDYAAIVLLDSRFGADRIRGKLPGWIRGG 898
Query: 720 I------KQYDSFDASLEG----LKSFFRD 739
+ ++ + + L G L FFR+
Sbjct: 899 MPAPGGAEERRAREGGLPGLMGALSKFFRE 928
Score = 57.0 bits (136), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 39/61 (63%), Gaps = 5/61 (8%)
Query: 25 VEF--PYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNC 82
V+F P+ PY QL FM V S L Q DG A+LESPTGTGKSLSL+C+ + W +
Sbjct: 18 VDFNHPFTPYDVQLEFMSTVYSVLQ--QGDGQV-AVLESPTGTGKSLSLICACMTWLRRH 74
Query: 83 K 83
K
Sbjct: 75 K 75
>gi|297743271|emb|CBI36138.3| unnamed protein product [Vitis vinifera]
Length = 826
Score = 165 bits (417), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 214/850 (25%), Positives = 348/850 (40%), Gaps = 220/850 (25%)
Query: 27 FPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCKLKN 86
FPY+PY Q+ FM + +L++ ++LESPTGTGK+LS++CS L W + K
Sbjct: 12 FPYEPYSIQIDFMKALYRSLNKGGV-----SMLESPTGTGKTLSIICSALQWLVD--RKQ 64
Query: 87 QLANISHSKPDTEAVTDPLANGGGFIPESQP--------------STIPPSTNGQTAQVA 132
QL K + P GGG + +P + + P+ +
Sbjct: 65 QL------KSEANQTQTP---GGGTGSDDEPDWMKNFGRNQGSCRNLLSPNLVEEGIHEK 115
Query: 133 MNNKNVKKKMTPTI---------------------FYASRTHSQISQVISEYKKTAYRVP 171
+ K+ +K +I ++ SRTHSQ+SQ + E +KT +
Sbjct: 116 KDRKSKRKAGGVSINSSSDEEEEDDNEEDGEGLKIYFCSRTHSQLSQFVKELRKTIFGNE 175
Query: 172 MAV--LASRKHYCTNKYVRDKEN---IDEECKLLLGDR--------NLG----------- 207
M V L SRK C N+ V N I+E C L ++ NLG
Sbjct: 176 MKVVCLGSRKISCINEEVLKLGNSTRINERCLELQQNKKKEVSKLKNLGSEGRIRRTKAS 235
Query: 208 --CPQFKNVHKVRGHPSLQKGGCHEVH-----DIEDLVNVGQVVRGCSYYAARSMADDAQ 260
CP +N HK LQK E+ DIEDLV++G+ + C YY +RS+ A
Sbjct: 236 SGCPMLRN-HK------LQKQFRSEISQEGALDIEDLVHLGRRMGTCPYYGSRSIIPAAD 288
Query: 261 LVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELE 320
LV PY +++ R ++ +++K I+I+DEAHN+ D I L + ++
Sbjct: 289 LVVLPYQSLLSKSSRESLGLNLKNNIVIIDEAHNLADSLISMYDAKITSSQLEHVHSHIK 348
Query: 321 Q--------VCSVNPMIYQPLIEMTQDLVGWIERRKATL-------AKREF--------- 356
Q + N Q L+ +T+ + + K T A++ F
Sbjct: 349 QYLQRFRNFLGPGNRRYIQTLLVVTRAFLQILLNGKDTSLVDPGHDAEKAFGAKSASDSS 408
Query: 357 ----QHFFSCWTGD----KALRELQEANISRQCFPILLECA----TKAIKEATDTESELP 404
FS + K L ++E+NI + + A A+ + ++ E
Sbjct: 409 MAINDFLFSLNIDNINLVKLLHYIKESNIIHKVSGYGDKVAYLRKGSALNDGGESNEEGS 468
Query: 405 HLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLN 464
LSG + SLT ++ D ++ + + + S GG + + L
Sbjct: 469 TLSGFRAFV--DMLQSLT-------NNDGDGKIIISRAKQACSGQQGGYLKYVM----LT 515
Query: 465 PAVVFKDVAELSLSIILTSGTLSPMNSFSSEL-------GVQFGTCLEAPHVIDVDLQVL 517
+F ++ + + ++IL GTL P+ L F +C H+I + +L
Sbjct: 516 GEKIFSEIVDQAHAVILAGGTLQPIEETRERLFPWLTSDQFHFFSC---SHIIPPE-SIL 571
Query: 518 TSVISTGPDNYPLNASYKTADGYKLMEK----LCN------------------------R 549
+S GP + SY + ++E+ LCN
Sbjct: 572 PVALSHGPSGQSFDFSYSSRSSSIMIEELGLLLCNLVTVVPEGIVVFFSSFDYEGQVHDA 631
Query: 550 WRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNND 609
W+ +G R+ KK +F EP+ + D E VLK Y +I + S D
Sbjct: 632 WKASGILERIMKKKCVFREPRKNT--DVEFVLKEYKEAIDKSS----------------D 673
Query: 610 LNTIESQENANKKGASFLAVCRGKI---------------VVGIPFPNINDIQVSLKKKY 654
N + ++ + GA LAV GKI +VG+P+P+ +DI++ + KY
Sbjct: 674 RN--QKEDPVPQNGAILLAVVGGKISEGINFSDGMGRCIVMVGLPYPSPSDIELLERVKY 731
Query: 655 NDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEE---RNRAH 711
+ G E+Y N +A+NQ+IGR IRH DY AI+L+D R+ + R+ +H
Sbjct: 732 IEGLGH-----RGKEYYENLCMKAVNQSIGRAIRHINDYAAILLVDARYASDPLKRSFSH 786
Query: 712 ISKWLRKSIK 721
+ L + IK
Sbjct: 787 PTNKLPQWIK 796
>gi|296481054|tpg|DAA23169.1| TPA: regulator of telomere elongation helicase 1 [Bos taurus]
Length = 583
Score = 164 bits (415), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 100/289 (34%), Positives = 153/289 (52%), Gaps = 33/289 (11%)
Query: 22 GIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQN 81
G+ V+FP+QPY Q +M +V+ L + +LESPTGTGK+L LLCSTLAW+++
Sbjct: 8 GVTVDFPFQPYKCQEEYMSKVLECLQEK-----VNGILESPTGTGKTLCLLCSTLAWREH 62
Query: 82 CKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKK 141
+ I+ LA+ G IPE +P
Sbjct: 63 LRDAVSARRIAERASGELFPDRTLASWGNAIPEGD---VPACYTD--------------- 104
Query: 142 MTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE---CK 198
P I YASRTHSQ++QVISE + T+YR + VL SR+ C + V+ +E+ + C+
Sbjct: 105 -IPKIIYASRTHSQLTQVISELRNTSYRPRVCVLGSREQLCIHPEVKKQESNHMQVHLCR 163
Query: 199 LLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADD 258
+ R+ C + NV + SL++ + DIEDLV G + C YY +R++
Sbjct: 164 RKVASRS--CHFYNNVEE----KSLEQELATPILDIEDLVRSGTKHKLCPYYLSRNLKQQ 217
Query: 259 AQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDI 307
A ++F PY+Y+++ R A +D+KG ++I DEAHN+E + +A S D+
Sbjct: 218 ADIIFMPYNYLLDAKSRRAHGIDLKGTVVIFDEAHNVEKMCEEAASFDL 266
Score = 68.2 bits (165), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 53/89 (59%), Gaps = 6/89 (6%)
Query: 447 SKNPGGNWTHTLSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLE 505
++ PG LS WC +P +++ + ++ILTSGTL+PM SFS E+ + F CLE
Sbjct: 444 ARKPG----KVLSYWCFSPGHSMRELVRQGVRTLILTSGTLAPMASFSLEMQIPFPVCLE 499
Query: 506 APHVIDVDLQVLTSVISTGPDNYPLNASY 534
PHVI+ Q+ VI GPD L++++
Sbjct: 500 NPHVIN-QHQIWVGVIPKGPDGAQLSSAF 527
>gi|268574822|ref|XP_002642390.1| Hypothetical protein CBG18394 [Caenorhabditis briggsae]
Length = 834
Score = 164 bits (415), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 198/879 (22%), Positives = 347/879 (39%), Gaps = 222/879 (25%)
Query: 27 FPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNC---- 82
FP+QPY QL M + ++ DG + ESPTGTGKSLS+LCSTL W +N
Sbjct: 6 FPFQPYDIQLRLMREIRDCIE----DGKV-GIFESPTGTGKSLSVLCSTLTWLENEENRI 60
Query: 83 ------KLKNQLANISHSKPDTEAVTDPLA----------------------------NG 108
KL+ NI+ SK + D L
Sbjct: 61 ETELNEKLRKIQENIAESKKSGASWEDALKLSLEAEKEESEVMEAIEKRKRLTTRIDLAK 120
Query: 109 GGFIPESQPSTIP------------------PS----TNGQTAQVAMNNKNVKKKMTPT- 145
G + S+ P PS ++G++ NNK+ +++ +
Sbjct: 121 QGMVDVSRKRKAPARDADFALADDEPKDEAAPSEEYHSDGESGSELHNNKDDEEEDQESP 180
Query: 146 ----IFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRD-KEN--IDEECK 198
IFYASRTHSQ+ Q++ E KT ++ + +SR + C N+ V+ K N I+E+C
Sbjct: 181 KCLKIFYASRTHSQLEQLVDELGKTRFQPRVVTCSSRGNLCVNEEVKKLKLNHLINEKCM 240
Query: 199 LLLGDRNLGCPQFKNVHKVRGHPSLQKGG------------CHEVHDIEDLVN------- 239
L R G K + GG + IEDLVN
Sbjct: 241 EL---RKNGTSDKDKKQKT------EDGGEKKKKSCSKSCEFYSSTQIEDLVNGVLANKL 291
Query: 240 --------VGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDE 291
G +GC Y+A+R QLV PY +++ R A +D+K +++LDE
Sbjct: 292 KTTIQVTKEGVSSKGCPYFASRKAVPQCQLVLLPYQVLLHEGTRNAWGIDLKDNVIVLDE 351
Query: 292 AHNIEDIARDAGSVDIDEDVL-LKLQMELE-------QVCSVNPMIYQPLIEMTQDLVGW 343
AHN+ S +I E L L L++ E ++ + N + + L ++T ++ +
Sbjct: 352 AHNVLTTINSLYSAEISEKSLSLALRLIREYNAKYKLRLKAKNLLYMKQLEQLTSKMLIF 411
Query: 344 I--ERRKATLAKREFQHFFSCWTGD--KALRELQEANISRQCFPILLECATKAIKEATDT 399
+ + ++ + + + + K ++++++ ++ L+ +I
Sbjct: 412 LNSQSKEDVMTMAQLSRNLNILELNLFKLATYIEKSDLCKKFHGFYLQSMRASID--LKK 469
Query: 400 ESELPHLSGMSV-----------------------ITLEGLFSSLTYFFSRNGSHVSDYQ 436
E+E P L+G+ IT+ SL F + D +
Sbjct: 470 ENEKPKLTGIQKLMVKKEEAEKIKAEENQEEVRPQITVSSPLFSLKSFIDALTNKCEDGR 529
Query: 437 LALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSEL 496
+ + K +K+P + LNPA +V + + +L GT+ P L
Sbjct: 530 ILIDK-----TKDPKYRYI------LLNPADRLAEVVKACRATVLVGGTMEPSELLVETL 578
Query: 497 --------GVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTAD---------- 538
++ +C HVI+ D Q+L I D P +YKT
Sbjct: 579 SRGSVGPDAIRRFSC---AHVIN-DSQLLAVTIQKTVDGKPFQLTYKTRQNPETLKSIGR 634
Query: 539 ------------------GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIV 580
Y+++ L + +ET ++ KK +F E + S
Sbjct: 635 TLQVLSQHIPNGVVIFVPSYEILTDLIKKMKETKIMEQIGRKKSVFAETRQSSS-----T 689
Query: 581 LKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFL-AVCRGKIVVGIP 639
+ Y++ ++ S+ A++ +G +F + R IV+G+P
Sbjct: 690 MLSDYSTAAKSSRGAIL---------------FAVMGGKMSEGINFSDELGRAVIVIGLP 734
Query: 640 FPNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILL 699
+PN +++ + ++ D+ ++ GN Y + ++NQ+IGR IRHR DY A+ L
Sbjct: 735 YPNKTGVELRERMRFLDSQMAN----GGNMLYESMCMHSVNQSIGRAIRHRKDYAAVYLF 790
Query: 700 DERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
D+R+ E ++ +S W+ ++ F ++ +FF+
Sbjct: 791 DDRYALESTKSKLSAWIGDRTQRNLRFPQIIQKSNAFFK 829
>gi|195132879|ref|XP_002010867.1| GI21782 [Drosophila mojavensis]
gi|193907655|gb|EDW06522.1| GI21782 [Drosophila mojavensis]
Length = 852
Score = 164 bits (415), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 185/699 (26%), Positives = 286/699 (40%), Gaps = 150/699 (21%)
Query: 146 IFYASRTHSQISQVISEYKKTAY--RVPMAVLASRKHYCTNKYVRDKENIDEECKLLLGD 203
IF+ SRTHSQ+SQ+++E +KT + V L SR+ C N VR NI L+ +
Sbjct: 195 IFFCSRTHSQLSQIVAELRKTPHGQNVRCIALGSRQQLCINAQVRKLPNIG-----LINE 249
Query: 204 RNLGCPQFK----NVHKVRGHPS------------LQKGGCHEVHDIEDLVNVGQVVRGC 247
R L Q K + K R S L E DIE+LV G GC
Sbjct: 250 RCLDMAQSKISANAISKSRQTLSRCVYKSSAQLQRLSNAALCEPFDIEELVAEGSACGGC 309
Query: 248 SYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDI 307
YYA R+ AQL+ PY ++ R + +D++GAI+I+DEAHN+ D S ++
Sbjct: 310 PYYATRAAQSQAQLLLLPYPMLLQRSARQQLGLDLRGAIIIVDEAHNLLDTIAQLHSSEL 369
Query: 308 DEDVLLKLQMELEQVC-----------SVNPMIYQPLIEMTQDLVGWIERRKATLAKREF 356
L +LQ+ +Q+ S N + L+ + + L+ +E R +
Sbjct: 370 S---LAQLQLAKQQLAGYKQRYARRLSSANLLRINQLLYVVRRLLQLLEAGGEPRMLRTY 426
Query: 357 Q-----HFFS---------CWTGDKAL------RELQE--------------------AN 376
+ FF+ C A R+LQ A
Sbjct: 427 ELSAEGDFFNIDVHELLEFCARTRLAQKMQSFGRQLQREPHPSENRPPPTQQLLQRLAAQ 486
Query: 377 ISRQCFPILLECATKAIKE-ATDTESELPH-LSGMSVITLEGLFSSLTYFFSRNGSHVSD 434
+QC L +C KA E A D + PH + F L F S+ +D
Sbjct: 487 HEQQC-QTLSKCKRKAADENADDKAKQPPHPQPAAQTPAMSSPFRPLIAFLETLTSNAAD 545
Query: 435 YQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSS 494
++ L NP T TL LNPA F D+ + + ++I+ GT+ P +
Sbjct: 546 GRVLL---------NP---ETATLKYLLLNPAEHFADIVKEARALIIAGGTMRPTQELTE 593
Query: 495 ELGVQFGTCLEA------PHVIDVDLQVLTSVISTGPDNYPLNASY--KTADG------- 539
+L F C E HV+ D VL ++ TGP L SY +T+
Sbjct: 594 QL---FAHCPERVVERFYDHVVPAD-AVLPFILPTGPTGARLCFSYAERTSPAMLKELSM 649
Query: 540 -------------------YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIV 580
Y ++ + ++G R+ +K +F E GG+ E +
Sbjct: 650 VLQNLCGVLPAGVVCFLPSYAYLDTVYGHLEQSGALQRIGQRKRIFRETAGGA--GVEQL 707
Query: 581 LKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPF 640
L+ Y N+I Q + A++ L+ + + + A L RG IVVG+P+
Sbjct: 708 LQQYANAIDQTAGGALL------------LSVVGGKLSEGLNFADQLG--RGVIVVGLPY 753
Query: 641 PNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLD 700
PN ++ + ++ D + +GNE+Y N +A+NQ IGR +RH DY + LLD
Sbjct: 754 PNRTSPELKERMRHLDATLGNG---AGNEYYENLCMKAVNQCIGRSVRHIRDYACVYLLD 810
Query: 701 ERFQEERNRAHISKWLRKSIK-QYDSFDASLEGLKSFFR 738
ER+ ER + + W+ + I + F A FF+
Sbjct: 811 ERYGSERIQQKLPAWIARHIHVASEGFGAVQARTARFFK 849
Score = 47.0 bits (110), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
Query: 27 FPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
FPY PY Q M ++ L+ Q + ESPTGTGKSL+L C L W
Sbjct: 18 FPYTPYEIQEQLMQQLFQVLEHKQ-----IGIFESPTGTGKSLTLTCGALTW 64
>gi|357129541|ref|XP_003566420.1| PREDICTED: probable ATP-dependent RNA helicase DDX11-like
[Brachypodium distachyon]
Length = 932
Score = 164 bits (415), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 207/855 (24%), Positives = 334/855 (39%), Gaps = 240/855 (28%)
Query: 27 FPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCKLKN 86
FP+ PY Q FM + + L R ALLESPTGTGK+LS++CS L W L +
Sbjct: 86 FPFTPYPIQSEFMSFLYAALSSGPR---ALALLESPTGTGKTLSIICSALQW-----LVD 137
Query: 87 QLANISHSKPDTEAVTDPLANGGG-----------FIP-----ESQPSTIPPSTNGQTAQ 130
PD E + +A GG F P E++ T P Q +
Sbjct: 138 HREAAGRGHPDQENGSATVAGGGAGDDDEPDWMRDFTPLLPKPENRKKTKPHPARRQEPR 197
Query: 131 VAMNNKNVK------------------------------------KKMTPTIFYASRTHS 154
A +++ + ++TP +++ SRTHS
Sbjct: 198 NAKDSEKSEGIGGNDSEEEFLLVEYDSDDEEGTRRHEDDEGEEDEAEVTPKVYFTSRTHS 257
Query: 155 QISQVISEYKKTAY--RVPMAVLASRKHYCTNKYVR---DKENIDEECKLLL-------- 201
Q+SQ + E KKT + ++ M L SR + C N VR I+E C L
Sbjct: 258 QLSQFVGELKKTQFSAKLRMVCLGSRMNLCINNDVRKLGSANRINERCLELQKNKKSSKI 317
Query: 202 ---GDRNLG--------CPQFKNVHKVRGHPSLQKGGCHEVH-----DIEDLVNVGQVVR 245
GD CP + SLQK EV DIEDL +G+ +
Sbjct: 318 KVDGDNQKARQAKISCQCPMLRKR-------SLQKEFRSEVSANGALDIEDLAQIGKKIG 370
Query: 246 GCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSV 305
C YY R M A LV PY ++ R ++ +++K +++I+DEAHN+ D S+
Sbjct: 371 TCPYYGVRDMVPAADLVVLPYQSLLLKSARESLGLNLKNSVIIIDEAHNLAD---SLTSM 427
Query: 306 DIDEDVLLKLQMELEQVCSVNPMIYQPLIEMTQDLVGWIERR---KATLAKREFQHFFSC 362
+ +L+ L + + ++ Q+++G RR + R FQ
Sbjct: 428 YNSKVTCPQLRAALSHL--------EAYLDRFQNVLGAGNRRYIQTLIVLTRSFQRVL-- 477
Query: 363 WTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPH-LSGMS---VITLEGLF 418
+G+ + ++ F + ++ ES + H +SG + +IT +G
Sbjct: 478 MSGEDGSCAVTSVTVNNFLFSLDIDNINIVKLCQYLKESNIIHKVSGYANKLIITQDGA- 536
Query: 419 SSLTYFFSRN-GSHVSDYQLALQKYIKR------------DSKNPGGNWTHT-LSLWCLN 464
S+L + + GS +S +Q A+ +++ + PGG L L
Sbjct: 537 SNLNHQQQHDEGSTISSFQ-AVANFLRSLLNSNVDGRIIVARQKPGGQPEDAYLKFIMLC 595
Query: 465 PAVVFKDVAELSLSIILTSGTLSPMNSFSSEL-------GVQFGTCLEAPHVIDVDLQVL 517
P +F +V E + ++++ GTL P+ L V+F +C H++ + +L
Sbjct: 596 PEKIFSEVTEDAHAVVMAGGTLQPIEETRLRLFPSLSTSDVKFFSC---NHIVPAE-SIL 651
Query: 518 TSVISTGPDNYPLNASYKTADGYKLMEK----LCN------------------------R 549
++ GP + S+ + ++E+ LCN
Sbjct: 652 PIAVTRGPSGMEFDFSFGSRRSPAMIEELGRFLCNIVTIVPDGVVMFFTSYEYEKQVYDA 711
Query: 550 WRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNND 609
W +G S+++ KK +F EPK + + E +L Y +I S
Sbjct: 712 WTASGTISKISKKKCVFREPK--NSVNVEGILNKYKEAIQSCS----------------- 752
Query: 610 LNTIESQENANKKGASFLAVCRGKI---------------VVGIPFPNINDIQV------ 648
E + GA LAV GKI +VG+P+P+ +D+++
Sbjct: 753 ----EHSQGTGVNGALLLAVVGGKISEGINFSDGMGRCVLMVGLPYPSPDDVELMETIKH 808
Query: 649 --------------SLKKKYN---------DTYRSSKNLLSGNEWYCNQAFRALNQAIGR 685
SL +Y+ DT R SG E Y N +A+NQ+IGR
Sbjct: 809 IGNHSSSSTVGDNNSLSSQYDHECTVEPGFDTLRRCGK--SGREHYENLCMKAVNQSIGR 866
Query: 686 CIRHRFDYGAIILLD 700
IRH DY A++L+D
Sbjct: 867 AIRHVNDYAAMLLVD 881
>gi|219110231|ref|XP_002176867.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411402|gb|EEC51330.1| predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]
Length = 791
Score = 164 bits (415), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 110/345 (31%), Positives = 162/345 (46%), Gaps = 76/345 (22%)
Query: 455 THTLSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVD 513
+ T+S WC PA+ +++A L++ SII+TSGTLSP+ S+S ELG+ F LE PH++ D
Sbjct: 449 SRTVSYWCFAPALAMEELASLNVRSIIVTSGTLSPLPSYSMELGLNFPHTLENPHIVS-D 507
Query: 514 LQVLTSVISTGPDNYPLNASY-KTADG---------------------------YKLMEK 545
Q+ VI G L +SY + DG Y +ME
Sbjct: 508 NQIHVRVIGKGVSGKELTSSYERRKDGEYYSELGNTLVALSKVTPAGMLVFFPSYSVMET 567
Query: 546 LCNRW----------RETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCA 595
RW W RL + K + VEPK + I H + + + C
Sbjct: 568 CIERWGGPSLNYNIKSPKTPWKRLLSTKSVVVEPKSSANLPEAIADFHRFLGMLKSPGCI 627
Query: 596 VVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYN 655
++ R K D +S R ++ G+PFP D +V LK+ +
Sbjct: 628 LMGVCRGKISEGIDFANEQS---------------RAVVITGLPFPPSFDAKVKLKRDFL 672
Query: 656 DTYR------------------SSKNL---LSGNEWYCNQAFRALNQAIGRCIRHRFDYG 694
D R S+ NL LSG++WY QA RA+NQAIGR IR+R DYG
Sbjct: 673 DGARAIGSMKASNVGGFADNASSTSNLATKLSGHDWYAQQAHRAVNQAIGRVIRNRSDYG 732
Query: 695 AIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFRD 739
A++LLD RF ++RN+ +SKW+R +K+ + F ++ L F+R+
Sbjct: 733 AVLLLDSRFSQQRNQEGLSKWVRPHLKKDEGFGTAVGALAKFYRE 777
Score = 161 bits (407), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 105/303 (34%), Positives = 154/303 (50%), Gaps = 48/303 (15%)
Query: 14 PLNAYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLC 73
P V G++V FP++PY Q +M +V+ L R++ +ALLESPTGTGK+L LLC
Sbjct: 35 PPTTVDVRGVRVHFPFRPYKCQETYMEKVLDALLRSE-----NALLESPTGTGKTLCLLC 89
Query: 74 STLAWQ-QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVA 132
STLAWQ + +L Q + + ++ A N Q A
Sbjct: 90 STLAWQREQSRLLQQASELQNTDASLLA------------------------NSQDAP-- 123
Query: 133 MNNKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDK-- 190
+ PTI YASRTHSQ+SQV+ E + T YR AVL SR C N V+ +
Sbjct: 124 -----ARAARVPTIIYASRTHSQLSQVVRELRNTRYRPQHAVLGSRDQMCVNPKVKKQGC 178
Query: 191 --ENIDEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHE--VHDIEDLVNVGQVVRG 246
+++ +C L DR C +F+N P+ + G + V D+EDLV +G+ +
Sbjct: 179 SATDVNHDCSKLGKDRK--C-RFRNNLDGFTAPANENSGTNTQPVMDMEDLVTMGKSHKV 235
Query: 247 CSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDI--KGAILILDEAHNIEDIARDAGS 304
C +Y R++ A+L+ PY+Y+ + R DI A+LI DEAHN+E A ++ S
Sbjct: 236 CPFYYTRALVAKAELILVPYNYLFDKDARATTLSDIPWDNAVLIFDEAHNLESFASESAS 295
Query: 305 VDI 307
D+
Sbjct: 296 FDL 298
>gi|301117338|ref|XP_002906397.1| ATP-dependent RNA helicase, putative [Phytophthora infestans T30-4]
gi|262107746|gb|EEY65798.1| ATP-dependent RNA helicase, putative [Phytophthora infestans T30-4]
Length = 819
Score = 164 bits (414), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 172/700 (24%), Positives = 294/700 (42%), Gaps = 133/700 (19%)
Query: 123 STNGQTAQVAMNNKNVKKKMTPTIFYASRTHSQISQVISEYKKTAY--RVPMAVLASRKH 180
S +GQ +V + VK I Y SRTHSQISQ + E +KTA+ + + L SRK+
Sbjct: 159 SLSGQVGEVRPDIGVVK------IIYCSRTHSQISQFVREIRKTAFADHIRVVSLGSRKN 212
Query: 181 YCTNKYVRDKEN---IDEECKLLL-------GDRNLGCPQFKNVHKVRGHPSLQKGGCHE 230
CTN V + + ++C ++ G + CP ++ ++ GH +
Sbjct: 213 LCTNPKVTKLSSDLRMTDKCLDMMQSGKTKNGKKVAKCPFYEK--ELLGH--YKDYALAH 268
Query: 231 VHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILD 290
V DIEDL +G + CSYY R AQ+V PYS +++ R + + ++ I+I D
Sbjct: 269 VQDIEDLHTLGDEMSICSYYGTRESIPLAQIVTVPYSMLLSKDTRETLGIALEDNIVIFD 328
Query: 291 EAHNIEDIARDAGSVDIDEDVLLKLQMEL--------EQVCSVNPMIYQPLIEMTQDLVG 342
EAHNI D + V+I L+ + L ++ N + L+ + + L
Sbjct: 329 EAHNIIDAINNTYKVEITSKQLVVARRTLWSYFSKYEKRFKGKNAFYIKQLLSILESLTK 388
Query: 343 WIERRKATLAKRE---------------------FQHFFSCWTGDKALRELQEANISRQC 381
++ + ++ K F + K L L E+ + ++
Sbjct: 389 FLRQLSKSVGKATSTGENEDGALGAQMMTINDFLFSARIDHFNMFKILEYLGESGLVKKL 448
Query: 382 FPILLECATKAIK--------EATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVS 433
+ +T + + +D E H+S + T+E L +LT S
Sbjct: 449 MGFVDSTSTGSPAAAPPAAATDDSDEGFESRHISPLR--TVEALLKALT-------SAGG 499
Query: 434 DYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFS 493
D ++ Q + SK G + LNPA+ F+++ S S+IL GT+ P++
Sbjct: 500 DGRILAQPH--HASKGVEG----LIRFILLNPAIHFQEIVNKSRSVILAGGTMQPVSQVI 553
Query: 494 SEL-------GVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASY------------ 534
+L + +C HVI +L +++GP L +Y
Sbjct: 554 DQLFSSIPREHIDLFSC---GHVIPPK-NLLGFSLASGPSQKHLEFTYSQRGDMEALDEL 609
Query: 535 --------KTADG--------YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFE 578
+ G Y+ E RW+ T Q+ ++ AKK +F EPK ++
Sbjct: 610 GRILLNLLRIVPGGIVVFFPSYRFEESAVRRWQATKQYEQIQAKKAIFSEPK--KSDELA 667
Query: 579 IVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGI 638
VL Y + S+ AV+ L+ + + + + LA C ++VG+
Sbjct: 668 EVLMQYSAACSRSGNGAVL------------LSVVGGKMSEGINFSDELARC--VVMVGM 713
Query: 639 PFPNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIIL 698
P+PN D ++ K + D SG ++Y + +A+NQ+IGR IRH+ DY I+L
Sbjct: 714 PYPNARDAELVEKMAFLDKITPG----SGRQFYESLCMKAVNQSIGRSIRHQKDYSTILL 769
Query: 699 LDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
+D R+ R+ + +W++ ++ SF L FFR
Sbjct: 770 VDCRYSSPAVRSRLPEWIQTRVQPPTSFGQVYSQLVQFFR 809
Score = 59.7 bits (143), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 35/52 (67%), Gaps = 5/52 (9%)
Query: 27 FPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
FPY PY QL M ++ +TL++ GHC + ESPTGTGKS+SL+C L W
Sbjct: 8 FPYDPYSIQLELMRQIWATLEQ----GHC-GIFESPTGTGKSISLICGALTW 54
>gi|353232615|emb|CCD79969.1| putative regulator of telomere elongation helicase 1 rtel1
[Schistosoma mansoni]
Length = 1165
Score = 163 bits (413), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 105/312 (33%), Positives = 160/312 (51%), Gaps = 31/312 (9%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ G++++FPYQPY Q +M +V+ +L+ + HA+LESPTGTGK+L LLC++LAW
Sbjct: 6 IDGVEIDFPYQPYDCQFEYMTKVLLSLNEGK-----HAILESPTGTGKTLCLLCASLAWL 60
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVK 139
QL + + +K N G P S S A + N K
Sbjct: 61 DKQANSVQLISATDAKHQ---------NTMGKRPTSDNVDNALSHQNFLASLGKVNNGCK 111
Query: 140 KKMTPTIFYASRTHSQISQVISEYKKTAY-RVPMAVLASRKHYCTNKYVRDKENIDEE-- 196
I YASRTHSQ++Q I+ K T Y R ++V+ SR C V E+ +
Sbjct: 112 ------IIYASRTHSQLAQAINALKGTVYSRRSVSVVGSRDQLCLLPDVTSLESNSAKIY 165
Query: 197 -CKLLLGDRNLGCPQFKNVHKVRGH--PSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAAR 253
C++ + R C F+N R +L+ G + DIEDL N GQ ++ C Y+ +R
Sbjct: 166 ACRMRVQTRT--CEYFRNFDSKRDEILTNLKSEG---IVDIEDLSNYGQKIKCCPYFISR 220
Query: 254 SMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLL 313
+ D+ L+F PY+Y+++P IR ++++ +I DEAHNIE + DA SV + +L
Sbjct: 221 ELKTDSSLIFMPYNYVLDPRIRSLYNINLENTTVIFDEAHNIEQVCEDASSVTLSSALLA 280
Query: 314 KLQMELEQVCSV 325
++ VC V
Sbjct: 281 SAIEHVKCVCEV 292
Score = 144 bits (362), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 99/339 (29%), Positives = 158/339 (46%), Gaps = 68/339 (20%)
Query: 452 GNWTHTLSLWCLNPAVVFKDVAELSLS-IILTSGTLSPMNSFSSELGVQFGTCLEAPHVI 510
G T+S WC +P + + + ++ IILTSGTL P+ +EL ++F L PHVI
Sbjct: 478 GTTNRTISYWCFSPGRAIQQLIQQNVRCIILTSGTLYPVEPIEAELNLKFPITLRNPHVI 537
Query: 511 DVDLQVLTSVISTGPDNYPLNASYKTAD----------------------------GYKL 542
+ D Q+ S+I GPD LNA+Y + Y
Sbjct: 538 NPD-QLNLSIIPRGPDGEKLNATYSVRETSAYRNSLGLLLIQLADVVPAGLLIFFPSYSF 596
Query: 543 MEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSI----SQGSKCAVVR 598
M + W++ + +L+ K +F+EP+ +Q F + Y + S G+ V
Sbjct: 597 MSQCIEYWKDGDVYEKLSRSKHIFIEPREKNQ--FNKIFNEYRKTACIENSVGAILFAVM 654
Query: 599 KKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKY---- 654
+ RV EG ++ +NA RG ++GIP+ I+D +VSLK Y
Sbjct: 655 RGRVS-EG------LDLADNAG----------RGVFILGIPYAPIHDPRVSLKMAYLDEQ 697
Query: 655 ------NDTYRSSKNLL-----SGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERF 703
N T+ + L +G +WY QA+RA+NQA+GR IRH DYG I L DERF
Sbjct: 698 FVKLKSNSTHDQLQKTLIDKYPTGRQWYNLQAWRAINQAVGRVIRHYKDYGIIYLCDERF 757
Query: 704 QEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFRDVKG 742
+ +++ W++ K Y++ + ++ FFR+++
Sbjct: 758 ASNNAQLNLAGWMQTKCKVYNNVELVVKDTDEFFRNMRN 796
>gi|390602956|gb|EIN12348.1| DNA repair helicase [Punctularia strigosozonata HHB-11173 SS5]
Length = 868
Score = 163 bits (413), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 184/747 (24%), Positives = 312/747 (41%), Gaps = 151/747 (20%)
Query: 111 FIPESQPSTIPPSTNGQTAQVAMNNK------NVKKKMTPT---IFYASRTHSQISQVIS 161
F+PE + P N A A+ NK + + PT ++YASRTHSQ+SQ+I
Sbjct: 151 FLPEDDEESSPDGLNISPAVRALMNKLSGGTASAIPEAPPTCTKVYYASRTHSQLSQIIP 210
Query: 162 EYKKTAYRV-------------PMAV---------------------------LASRKHY 181
E +K R P++ L SRK
Sbjct: 211 ELRKLKLRPASNQRNDRPRSHHPISTTDATSKRKSSEDEPENEELVTHVRSLSLGSRKQL 270
Query: 182 CTNKYVRDKE-NIDEECKLLLGDR-NLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVN 239
C +R K +IDE C+ LL ++ + CP + P L+ DIEDL N
Sbjct: 271 CIYDELRSKTTDIDEACRTLLSEKGDKRCPYLPAIDDNTRIPKLRDIILSSPMDIEDLAN 330
Query: 240 VGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIA 299
G+ C Y+ +RS +QLV PY+ +++ R A+ +D+K ++++DEAHN+
Sbjct: 331 AGRRHETCPYFGSRSAIPQSQLVLLPYNLLLHRSAREALGIDLKDQVVVIDEAHNLIPTL 390
Query: 300 RDAGSVDIDEDVLLKLQMELEQVC-----------SVNPMIYQPLIEMTQDLVGWIERRK 348
SV + E + ++ L Q+ S + + + L+ + + G +
Sbjct: 391 LSLSSVQVAEHTI---RLSLSQLAAYVSRFRSRLASKHLVCLKRLVSFLKAMYGVVNEFA 447
Query: 349 AT--------LAKREFQ--HFFSCWTGDKA----LRELQEANISRQCFPILLECATKAIK 394
T L+K E H F G K L E++E + R + + A+
Sbjct: 448 TTGAKEPQGPLSKPEVMTVHEFVSRLGRKVDGINLLEVEEY-LRRSKIARKISSYSDAV- 505
Query: 395 EATDTESELPHLSGMSVIT----LEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNP 450
E + P S T +E L +LT S D +++L + +
Sbjct: 506 ----VEKQGPKRSNAGAPTPLHVVESLIVALT-------SPNEDGRVSLSRV------HE 548
Query: 451 GGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGT----CLEA 506
G+ T + LNP+ FK+V + + ++IL GT+SPM+ + ++L Q +
Sbjct: 549 AGHDTVVVRYQQLNPSTHFKEVVDTARTVILAGGTMSPMSDYVTQLFPQIKSDNLMLRTY 608
Query: 507 PHVIDVDLQVLTSVISTGPDNYPLNASYK---------------------TADG------ 539
H++ + T V+S GP + T G
Sbjct: 609 GHIVPAS-NIQTVVVSKGPRGNDFEFKFASRRDPLAIAELGQALSNLINITPGGMVIFFP 667
Query: 540 -YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVR 598
Y ++ WRE+G ++ KK + EP+ S+ E VL+ Y + IS+ +
Sbjct: 668 SYAFLDSAKASWRESGLLAKWTTKKKVHYEPQSASE--VETVLRDYASDISR------ID 719
Query: 599 KKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYNDTY 658
K++G L + ++ + A LA C ++VG+PF N++ ++ + KY ++
Sbjct: 720 PSTSKKQGAILLAVVGAKLSEGLNFADDLARC--VVIVGLPFANLDSPELKERMKYVNSL 777
Query: 659 ------RSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHI 712
++S + +E Y N A+NQ+IGR IRHR D+ +I+LLD R+ R R+ +
Sbjct: 778 ETANGGKASGAKDAAHELYENMCMNAVNQSIGRAIRHRADWASIVLLDRRYSSPRIRSKL 837
Query: 713 SKWLRKSIKQYDSFDASLEGLKSFFRD 739
KWL S +F ++ + F+R+
Sbjct: 838 PKWLGDSTVVPQTFGQVIKEMSLFYRN 864
Score = 46.2 bits (108), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 33/53 (62%), Gaps = 6/53 (11%)
Query: 27 FPYQP-YGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
FPYQP Y +Q M + S L+ + H ++ES T TGK+L LLC+TL+W
Sbjct: 14 FPYQPPYPNQQELMKHLYSVLEHRR-----HTIVESRTSTGKTLVLLCATLSW 61
>gi|297845000|ref|XP_002890381.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297336223|gb|EFH66640.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 515
Score = 163 bits (412), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 93/185 (50%), Positives = 113/185 (61%), Gaps = 31/185 (16%)
Query: 29 YQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCKLKNQL 88
YQPYG+ L FM RVISTL RAQR GH H LLESPT TGKSLSLLCS L WQ++ K +
Sbjct: 6 YQPYGTHLAFMSRVISTLYRAQRYGHSHTLLESPTNTGKSLSLLCSVLPWQKSYKSRFPN 65
Query: 89 ANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKKMTPTIFY 148
N+SHSK +QPST A +N + PTI+Y
Sbjct: 66 GNLSHSK-------------------TQPST-----------AASSNVEPPEPAIPTIYY 95
Query: 149 ASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEECKLLLGDRNLGC 208
A RTH+QI+QVI EY+KT YRVPM VL SRK YCTN +V+ KEN DE+ LL +N+ C
Sbjct: 96 A-RTHAQITQVILEYRKTGYRVPMTVLVSRKRYCTNSHVQGKENADEKLLLLKDKKNIKC 154
Query: 209 PQFKN 213
++ +
Sbjct: 155 AEYAD 159
Score = 117 bits (294), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/139 (46%), Positives = 88/139 (63%), Gaps = 20/139 (14%)
Query: 596 VVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKI----------VVGIPFPNIND 645
V R RVK+ + + ++ +KKG++FLAVCRGK+ +VGIPFPN ++
Sbjct: 218 VGRNSRVKKA----WSFLTEAQDDSKKGSAFLAVCRGKVSEGLDDCAQMIVGIPFPNFSN 273
Query: 646 IQVS-----LKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLD 700
+S LK+KY DT +SSKNL G+EWYC QA+ ALNQA GRCIRHRFDYGAII L
Sbjct: 274 ESLSCQVVELKRKYKDTNKSSKNL-GGSEWYCQQAYHALNQAAGRCIRHRFDYGAIIFLI 332
Query: 701 ERFQEERNRAHISKWLRKS 719
+E+ ++K + +S
Sbjct: 333 PTTKEQSVYFKVTKAIYQS 351
>gi|45201086|ref|NP_986656.1| AGL010Wp [Ashbya gossypii ATCC 10895]
gi|74691951|sp|Q750G3.1|CHL1_ASHGO RecName: Full=ATP-dependent RNA helicase CHL1; AltName:
Full=Chromosome loss protein 1
gi|44985869|gb|AAS54480.1| AGL010Wp [Ashbya gossypii ATCC 10895]
gi|374109907|gb|AEY98812.1| FAGL010Wp [Ashbya gossypii FDAG1]
Length = 801
Score = 162 bits (410), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 195/851 (22%), Positives = 336/851 (39%), Gaps = 188/851 (22%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+G + P+ PY QL M ++ L+ ++ G + ESPTGTGK+LSL+CST W
Sbjct: 1 MGRCEFYHPFTPYRIQLELMQQIYGLLESGKKMG----IFESPTGTGKTLSLICSTFTWL 56
Query: 80 QNCKL----------------------------KNQLANISHSKPDTE----AV-TDPLA 106
+ K ++ LA+++ S E AV TD L
Sbjct: 57 REHKAGYLQGSTGAQDSEEDSEDEPAWVKENYEQSVLADVTASMRAYEQRLAAVDTDLLV 116
Query: 107 NGGG-----------------FIPESQPSTIP--PSTNGQTAQVAMN-NKNVKKKMTPT- 145
G F+P++ S + PS G Q+ + ++K+ +
Sbjct: 117 KGAAKRQRVEVAVERPDDGAEFLPDAYHSDVEERPSHAGGRGQLRKQLDADIKRLLRKLD 176
Query: 146 ----------------IFYASRTHSQISQVISEYKKTAY----------RVPMAVLASRK 179
+++ASRTH+Q+ Q ++ + + RV L SRK
Sbjct: 177 EPDAADKSRLAANPLKVYFASRTHTQLGQFAAQLRLPQFPPSLAGLEQERVKFLPLGSRK 236
Query: 180 HYCTNKYVRD--KENIDEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDL 237
C +K V + I+E C + C F + Q + DIEDL
Sbjct: 237 QLCIHKKVSKVKSDGINEACMDAVSKSE--CSFFSAAREPDIIRQFQDQAFSTIQDIEDL 294
Query: 238 VNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIED 297
V +G + C YY++R + + A+++ PY +++ R M +D++ +I+++DEAHN+ D
Sbjct: 295 VGIGNTLHACPYYSSRELIEGAEVITLPYQHLLLENARKTMGIDLRDSIIVIDEAHNLID 354
Query: 298 IARDAGSVDIDEDVLLKLQMELE--------QVCSVNPMIYQPLIEMTQDLVGWIERRKA 349
S I L + ++ L+ ++ S N + LI+M L +IE +
Sbjct: 355 TINSIHSASISLTELRQCKLALQAYLAKFKTRLNSGNRVNLLKLIKMVDVLSQFIETQYK 414
Query: 350 TLAKR--EFQHFFSCWTGD-----KALRELQEANISRQCFPILLECATKAIKEATDTESE 402
KR + F + D K + ++ + ++ + + + +++ + +
Sbjct: 415 N-GKRINDPNDIFMGTSMDVVNIHKLEKYMKTSKVAYKIDKYIQATTSNDLQDRGSRDIK 473
Query: 403 LPHLSGM-SVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLW 461
P L + S + S FF NG HV Y L
Sbjct: 474 QPILFKVASFLKTLANPSEEGQFFFENG-HVLKYML------------------------ 508
Query: 462 CLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFG----TCLEAPHVIDVD---- 513
L P+ V K + + +IL GT+ P+N F ++L T HVI D
Sbjct: 509 -LEPSEVLKSIVTEAKCVILAGGTMEPVNDFFTQLVPYLAPTDVTTYSCGHVIPDDNLNA 567
Query: 514 -------------------LQVLTSVISTGPDNYPLNASYKTADGYKLMEKLCNRWRETG 554
++ L I P + YK ++ + W + G
Sbjct: 568 FIVSENFEFTFANREDIALIERLFHFIYQLASRVPFGMVVFFS-SYKYIDFVVKTWTDRG 626
Query: 555 QWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKR--EGNNDLNT 612
SRL+A K ++ E G+ VLK Y +I K A++ R EG N N
Sbjct: 627 LLSRLDAIKRIYHETSDGAD-----VLKGYSETIQSEKKGAILLAVVGGRLSEGINFENE 681
Query: 613 IESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKY--NDTYRSSKNLLSGN-- 668
+ R ++VG+PFPN+ ++ +K+++ R+ N
Sbjct: 682 L----------------ARAVVLVGLPFPNMFSGEMIVKQQHIKEKVIRNGGTQEDVNKA 725
Query: 669 --EWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSF 726
E+Y N +A+NQ++GR IRH D+ + L+D+R+ R + +S W+RK I+ +
Sbjct: 726 VREFYENICMKAVNQSVGRAIRHASDFANVYLIDKRYSGPRIQQKLSDWVRKRIQSASNI 785
Query: 727 DASLEGLKSFF 737
L ++FF
Sbjct: 786 PKILSDTEAFF 796
>gi|429329870|gb|AFZ81629.1| DNA repair helicase, putative [Babesia equi]
Length = 956
Score = 162 bits (409), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 115/331 (34%), Positives = 177/331 (53%), Gaps = 43/331 (12%)
Query: 12 RKPLNAYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSL 71
+ P + + + G++V FPY PY SQ ++M VI +A ++G +ALLESPTGTGK+LSL
Sbjct: 3 KDPDSLHIIEGVEVRFPYPPYQSQKLYMEAVI----KAVKNGK-NALLESPTGTGKTLSL 57
Query: 72 LCSTLAWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQV 131
+CS+LA C L N+ N K A TD AN + ES S + ++ + V
Sbjct: 58 ICSSLA----CLLNNKFNN----KGGFNAPTDN-ANNNQYTLES--SLLNKMSDLRKTPV 106
Query: 132 AMNNKN-VKKKMTPTIFYASRTHSQISQVISEYKKTAYR-------VPMAVLASRKHYCT 183
+ K ++ + I YASRTH+Q+ QV+ E +K+ Y + +L SR C
Sbjct: 107 SDQKKTKLRNRNRIHIVYASRTHTQLRQVLKEVRKSLYTNEFNSKGIKAVLLGSRDQLCI 166
Query: 184 N--KYVRDKENIDEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGC------HEVHDIE 235
N + E ++ CK L+ +R K H L+ G +E+ DIE
Sbjct: 167 NPARGNSSGEALNALCKNLVQNR-----------KCIYHSGLKMGKVNEDMSFYELLDIE 215
Query: 236 DLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNI 295
D+V++G+ + C YYA + + A L PY+Y+++ IR AME++++GAILI+DEAHNI
Sbjct: 216 DMVSLGKSKKCCPYYAVKDAHESADLTLLPYNYLLSTTIREAMELNLQGAILIIDEAHNI 275
Query: 296 EDIARDAGSVDIDEDVLLKLQMELEQVCSVN 326
E IA +A S I + + + L + S +
Sbjct: 276 ESIAENAASFYIRQVDIARYMAALRRFASFH 306
Score = 120 bits (300), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 97/337 (28%), Positives = 154/337 (45%), Gaps = 75/337 (22%)
Query: 458 LSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELG---VQFGTCLEAPHVIDVD 513
L+ CL F + + + SIILTSGTL+P+ ++G + F L+ HVI+
Sbjct: 518 LNFECLQAVPTFLRIKDEGVRSIILTSGTLAPLYVLEKQIGGNKLPFEIKLQNRHVIEPS 577
Query: 514 LQVLTSVISTGPDN-YPLNASYKTA----------------------------DGYKLME 544
+V +++ D+ + L++ Y T Y M
Sbjct: 578 -RVWAGIVTGDKDDPHSLSSVYNTRATTPYVKALGESLLSFIKCVPSGVLVFFGSYPAMN 636
Query: 545 KLCNRWRETGQWSRLNAKKPLFVEPKGG---SQEDFEIVLKHYYNSISQGSKCAVVRKKR 601
+ + W++ G +S++ K +F+E + S E+++ + K +S ++ ++ K
Sbjct: 637 QTVSMWKQLGLYSKMEMFKSIFIESRSSELNSAENYQELSK--LDSSYGLTQAQIMEYKS 694
Query: 602 VKREGNNDLNTIESQENANKKGASFLAVCRGKI---------------VVGIPFPNINDI 646
G KG+ F+ +CRGKI V GIP+PN D
Sbjct: 695 HITSG---------------KGSIFIGICRGKIAEGIDFSDDYCRGVFVCGIPYPNRYDD 739
Query: 647 QVSLKKKY-----NDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDE 701
+LK Y N S+KN L+ +WY QA RA+NQAIGR IRH DYGA++L D
Sbjct: 740 NTALKMDYLRRNGNCETESAKNDLA-YDWYTTQAIRAINQAIGRSIRHINDYGAVLLADY 798
Query: 702 RFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
R+Q + +IS+W+ +K Y S D S + LK FF+
Sbjct: 799 RYQLSPIKQNISEWVANRLKIYQSIDDSTDSLKRFFK 835
>gi|320034910|gb|EFW16853.1| ATP-dependent RNA helicase [Coccidioides posadasii str. Silveira]
Length = 905
Score = 162 bits (409), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 178/703 (25%), Positives = 295/703 (41%), Gaps = 157/703 (22%)
Query: 146 IFYASRTHSQISQVISEYKKTAY--------------------RVP---------MAVLA 176
IFY SRTHSQ++Q E ++ A+ R P L
Sbjct: 241 IFYCSRTHSQLAQFARELRRVAFPPSIPPETEDGEIDTQGEGRRHPDTELEEPTKHVSLG 300
Query: 177 SRKHYCTNKYVRDKEN---IDEECKLLLGDRNL---GCPQFKNVHKVRGHPSLQKGGCHE 230
SRK C N +R N I+E C L L CP + + E
Sbjct: 301 SRKTMCINPKIRRLGNATAINERCLDLQSSNVLPEHKCPFAPSKENELAISDFRDHVLAE 360
Query: 231 VHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILD 290
VHDIED+ +GQ C YYA+RS+ +++V PY ++ R A+++ +K ++I+D
Sbjct: 361 VHDIEDIGKIGQRTGICPYYASRSVIGHSEIVTLPYQLLLQKSARDALDISLKDHVIIID 420
Query: 291 EAHNIEDIARDAGSVDIDEDVLLKLQMELEQVCSVNPMIYQP--------LIEMTQDLVG 342
EAHN+ D+ + SV++ L +L++ LEQ+ ++ Y+ + L+G
Sbjct: 421 EAHNLMDVIANIHSVNVS---LTQLRIGLEQL-TIYARKYKARLKGKNRVYVAQVMRLLG 476
Query: 343 WIERR-KATLAKREFQH------FFSCWTG------DKALRELQEANISRQCFPILLECA 389
I + ++ LA RE + + G K R LQE+ ++R+ +E +
Sbjct: 477 SIAKYLESVLAARELREGAVDPSYLMSGKGVDQINLHKLSRYLQESKLARKV-DGYIESS 535
Query: 390 TKAIKEATDTESELPHLSGMSVITLEGLFSSLT--YFFSRNGSHVSDYQLALQKYIKRDS 447
T ++ +T + +P L + L + S FF +NG+ V L KY
Sbjct: 536 TSLEEKNPETSTTVPVLFQVQSFLLSLMNPSAEGRLFFEKNGNDV------LLKYT---- 585
Query: 448 KNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFG----TC 503
L+P F++ E + ++IL GT+SPM+ + L
Sbjct: 586 --------------LLDPTAHFREAVEEARAVILAGGTMSPMSDYRDHLFSYLAPGQLRT 631
Query: 504 LEAPHVIDVDLQVLTSVISTGPDNYPLNASYK---------------------TADG--- 539
HVI + +S G + + +++ T DG
Sbjct: 632 FSYGHVIPTS-NLSARPVSRGILDTEFDFTFEKRNSRAMIIDLGKTISEICKATPDGVVA 690
Query: 540 ----YKLMEKLCNRWRE----TGQWSRLNA---KKPLFVEPKGGSQEDFEIVLKHYYNSI 588
Y + ++ W++ +G S L++ KPL E K + + E +L+ Y N I
Sbjct: 691 FFPSYDFLNQVVEIWKQPCSNSGNPSILDSLGLVKPLLYESKEKAM-NTEALLQKYANFI 749
Query: 589 SQGSKCAVVRKKRVK-REGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQ 647
+G ++ K EG N +++ G RG IV+G+PF NI +
Sbjct: 750 DEGKGALLLSVMGGKLSEGIN---------FSDRLG-------RGVIVIGLPFANIRSAE 793
Query: 648 VSLKKKYND--TY---------RSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAI 696
K +Y + TY R SK L+G ++Y N R +NQ IGR IRH+ DY AI
Sbjct: 794 WQAKIQYVERKTYERSSGGEETRRSKAKLAGRDFYENACMRVVNQCIGRAIRHQHDYAAI 853
Query: 697 ILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFRD 739
++ D R+ R ++ + +W+R+S+ A++ L +FF +
Sbjct: 854 LMFDRRYGTARIQSKLPEWIRRSLVS-APIGATINNLYTFFEE 895
Score = 42.7 bits (99), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 15/77 (19%)
Query: 28 PYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGT----------GKSLSLLCSTLA 77
PY PY Q+ FM + + ++ + + ESPTGT GKSLSL+C +L
Sbjct: 11 PYSPYDIQVQFMRSLYTCIEECKV-----GIFESPTGTVSILTPEGGVGKSLSLICGSLT 65
Query: 78 WQQNCKLKNQLANISHS 94
W ++ K L +I +S
Sbjct: 66 WLRDHKRSVFLEDIENS 82
>gi|303310525|ref|XP_003065274.1| DNA repair helicase family protein [Coccidioides posadasii C735
delta SOWgp]
gi|240104936|gb|EER23129.1| DNA repair helicase family protein [Coccidioides posadasii C735
delta SOWgp]
Length = 864
Score = 162 bits (409), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 178/703 (25%), Positives = 294/703 (41%), Gaps = 157/703 (22%)
Query: 146 IFYASRTHSQISQVISEYKKTAY--------------------RVP---------MAVLA 176
IFY SRTHSQ++Q E ++ A+ R P L
Sbjct: 200 IFYCSRTHSQLAQFARELRRVAFPPSIPPETEDGEIDTQGEGRRHPDTELEEPTKHVSLG 259
Query: 177 SRKHYCTNKYVRDKEN---IDEECKLLLGDRNL---GCPQFKNVHKVRGHPSLQKGGCHE 230
SRK C N +R N I+E C L L CP + + E
Sbjct: 260 SRKTMCINPKIRRLGNATAINERCLDLQSSNVLPEHKCPFAPSKENELAISDFRDHVLAE 319
Query: 231 VHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILD 290
VHDIED+ +GQ C YYA+RS+ +++V PY ++ R A+++ +K ++I+D
Sbjct: 320 VHDIEDIGKIGQRTGICPYYASRSVIGHSEIVTLPYQLLLQKSARDALDISLKDHVIIID 379
Query: 291 EAHNIEDIARDAGSVDIDEDVLLKLQMELEQVCSVNPMIYQP--------LIEMTQDLVG 342
EAHN+ D+ + SV++ L +L++ LEQ+ ++ Y+ + L+G
Sbjct: 380 EAHNLMDVIANIHSVNVS---LTQLRIGLEQL-TIYARKYKARLKGKNRVYVAQVMRLLG 435
Query: 343 WIERR-KATLAKREFQH------FFSCWTG------DKALRELQEANISRQCFPILLECA 389
I + ++ LA RE + + G K R LQE+ ++R+ +E +
Sbjct: 436 SIAKYLESVLAARELREGAVDPSYLMSGKGVDQINLHKLSRYLQESKLARKV-DGYIESS 494
Query: 390 TKAIKEATDTESELPHLSGMSVITLEGLFSSLT--YFFSRNGSHVSDYQLALQKYIKRDS 447
T ++ +T + +P L + L + S FF +NG+ V L KY
Sbjct: 495 TSLEEKNPETSTTVPVLFQVQSFLLSLMNPSAEGRLFFEKNGNDV------LLKYT---- 544
Query: 448 KNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFG----TC 503
L+P F++ E + ++IL GT+SPM+ + L
Sbjct: 545 --------------LLDPTAHFREAVEEARAVILAGGTMSPMSDYRDHLFSYLAPGQLRT 590
Query: 504 LEAPHVIDVDLQVLTSVISTGPDNYPLNASYK---------------------TADG--- 539
HVI + +S G + + +++ T DG
Sbjct: 591 FSYGHVIPTS-NLSARPVSRGILDTEFDFTFEKRNSRAMIIDLGKTISEICKATPDGVVA 649
Query: 540 ----YKLMEKLCNRWRE----TGQWSRLNA---KKPLFVEPKGGSQEDFEIVLKHYYNSI 588
Y + ++ W++ +G S L++ KPL E K + + E +L+ Y N I
Sbjct: 650 FFPSYDFLNQVVEIWKQPCSNSGNPSILDSLGLVKPLLYESKEKAM-NTEALLQKYANFI 708
Query: 589 SQGSKCAVVRKKRVK-REGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQ 647
+G ++ K EG N +++ G RG IV+G+PF NI +
Sbjct: 709 DEGKGALLLSVMGGKLSEGIN---------FSDRLG-------RGVIVIGLPFANIRSAE 752
Query: 648 VSLKKKY--NDTY---------RSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAI 696
K +Y TY R SK L+G ++Y N R +NQ IGR IRH+ DY AI
Sbjct: 753 WQAKIQYVERKTYERSSGGEETRRSKAKLAGRDFYENACMRVVNQCIGRAIRHQHDYAAI 812
Query: 697 ILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFRD 739
++ D R+ R ++ + +W+R+S+ A++ L +FF +
Sbjct: 813 LMFDRRYGTARIQSKLPEWIRRSLVS-APIGATINNLYTFFEE 854
Score = 53.5 bits (127), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 5/72 (6%)
Query: 28 PYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCKLKNQ 87
PY PY Q+ FM + + ++ + + ESPTGTGKSLSL+C +L W ++ K
Sbjct: 11 PYSPYDIQVQFMRSLYTCIEECKV-----GIFESPTGTGKSLSLICGSLTWLRDHKRSVF 65
Query: 88 LANISHSKPDTE 99
L +I +S D E
Sbjct: 66 LEDIENSDGDDE 77
>gi|119195411|ref|XP_001248309.1| hypothetical protein CIMG_02080 [Coccidioides immitis RS]
gi|121932141|sp|Q1E5T3.1|CHL1_COCIM RecName: Full=ATP-dependent RNA helicase CHL1; AltName:
Full=Chromosome loss protein 1
Length = 861
Score = 161 bits (408), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 180/709 (25%), Positives = 298/709 (42%), Gaps = 169/709 (23%)
Query: 146 IFYASRTHSQISQVISEYKKTAY--------------------RVP---------MAVLA 176
IFY SRTHSQ++Q E ++ + R P L
Sbjct: 197 IFYCSRTHSQLAQFARELRRVVFPPSIPPETEDGEIDTQGEGRRHPDTELEEPTKHVSLG 256
Query: 177 SRKHYCTNKYVRDKEN---IDEEC------KLLLGDRNLGCPQFKN---VHKVRGHPSLQ 224
SRK C N VR N I+E C +L G + P +N ++ R H
Sbjct: 257 SRKTMCINPKVRRLGNATAINERCLDLQSSNVLPGHKCPFAPSKENELAINDFRDHV--- 313
Query: 225 KGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKG 284
EVHDIED+ +GQ C YYA+RS+ +++V PY ++ R A+++ +K
Sbjct: 314 ---LAEVHDIEDIGKIGQRTGICPYYASRSVIGHSEIVTLPYQLLLQKSARDALDISLKD 370
Query: 285 AILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQVCSVNPMIYQP--------LIEM 336
++I+DEAHN+ D+ + SV++ L +L++ LEQ+ ++ Y+ +
Sbjct: 371 HVIIIDEAHNLMDVIANIHSVNVS---LTQLRIGLEQL-TIYARKYKARLKGKNRVYVAQ 426
Query: 337 TQDLVGWIERR-KATLAKREFQH------FFSCWTG------DKALRELQEANISRQCFP 383
L+G I + ++ LA RE + + G K R LQE+ ++R+
Sbjct: 427 VMRLLGSIAKYLESVLAARELREGAVDPSYLMSGKGIDQINLHKLSRYLQESKLARKV-D 485
Query: 384 ILLECATKAIKEATDTESELPHLSGMSVITLEGLFSSLT--YFFSRNGSHVSDYQLALQK 441
+E +T ++ +T + +P L + L + S FF +NG+ V L K
Sbjct: 486 GYIESSTSLEEKNPETSTTVPVLFQVQSFLLSLMNPSAEGRLFFEKNGNDV------LLK 539
Query: 442 YIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFG 501
Y L+P F++ E + ++IL GT+SPM+ + L
Sbjct: 540 YT------------------LLDPTAHFREAVEEARAVILAGGTMSPMSDYRDHLFSYLA 581
Query: 502 ----TCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYK---------------------T 536
HVI + +S G + + +++ T
Sbjct: 582 PGQLRTFSYGHVIPTS-NLSARPVSRGILDTEFDFTFEKRNSRAMIIDLGKTISEICKAT 640
Query: 537 ADG-------YKLMEKLCNRWRE----TGQWSRLNA---KKPLFVEPKGGSQEDFEIVLK 582
DG Y + ++ W++ +G S L++ KPL E K + + E +L+
Sbjct: 641 PDGVVAFFPSYDFLNQVVEIWKQPCSNSGNPSILDSLGLVKPLLYESKEKAM-NTEALLQ 699
Query: 583 HYYNSISQGSKCAVVRKKRVK-REGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFP 641
Y N I +G ++ K EG N +++ G RG IV+G+PF
Sbjct: 700 KYANFIDEGKGALLLSVMGGKLSEGIN---------FSDRLG-------RGVIVIGLPFA 743
Query: 642 NINDIQVSLKKKY--NDTY---------RSSKNLLSGNEWYCNQAFRALNQAIGRCIRHR 690
NI + K +Y TY R SK L+G ++Y N R +NQ IGR IRH+
Sbjct: 744 NIRSAEWQAKIQYVERKTYERSSGGEETRRSKAKLAGRDFYENACMRVVNQCIGRAIRHQ 803
Query: 691 FDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFRD 739
DY AI++ D R+ R ++ + +W+R+S+ A++ L +FF +
Sbjct: 804 HDYAAILMFDRRYGTARIQSKLPEWIRRSLIS-APIGATISNLYTFFEE 851
Score = 53.5 bits (127), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 5/72 (6%)
Query: 28 PYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCKLKNQ 87
PY PY Q+ FM + + ++ + + ESPTGTGKSLSL+C +L W ++ K
Sbjct: 11 PYSPYDIQVQFMRSLYTCIEECKV-----GIFESPTGTGKSLSLICGSLTWLRDHKRSVF 65
Query: 88 LANISHSKPDTE 99
L +I +S D E
Sbjct: 66 LEDIENSDGDDE 77
>gi|388583056|gb|EIM23359.1| DNA repair helicase [Wallemia sebi CBS 633.66]
Length = 831
Score = 161 bits (407), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 167/669 (24%), Positives = 289/669 (43%), Gaps = 125/669 (18%)
Query: 146 IFYASRTHSQISQVISEYKKTAYRVPMAV--LASRKHYCTNKYVRDK----ENIDEECKL 199
IF+ASRTHSQ+SQ ISE KT Y+ V LASRK+ C N+ R+ ++E C+
Sbjct: 205 IFFASRTHSQLSQFISEINKTTYKQDARVISLASRKNLCINEKARNAPGGDAGLNERCRE 264
Query: 200 LL---GDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMA 256
L C + + + + + ++EDL +G+ + C YY +R
Sbjct: 265 LRTAPASSEKRCKFYPKIEEQTKLLEFRDHALASIRNVEDLEELGKNLNVCPYYGSRRAI 324
Query: 257 DDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIED------------------- 297
+++ PY+ +++ R +M + +K I+++DEAHN+ D
Sbjct: 325 KQSEICTLPYNLLLSKRARESMGISLKDHIVVIDEAHNLIDTILAVHSCSVSLKTLNAAM 384
Query: 298 ------IARDAGSVDIDEDVLLKLQMEL--------EQVCSVNPMIYQPLIEMTQDLVGW 343
I R + + V LKL + ++V SVN Q +I + +D+VG
Sbjct: 385 KALSTYIQRYGKRLKGNHVVSLKLYAKTLKGLINFCQKVRSVNKKPTQEIIYLPKDVVG- 443
Query: 344 IERRKATLAKREFQHFFSCWTGDKALRELQEANISRQCFPILLECATK-AIKEATDTESE 402
+F + + LR ++++S++ A K +K T E
Sbjct: 444 -----------DFGEDVNLGNVEAYLR---DSHMSQKLGSFAEREAKKDGLKNGQLTSPE 489
Query: 403 -LPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLW 461
L + S S+ ++ L +L Y +G V + D++ P LS
Sbjct: 490 SLSYASANSMHQVQSLLLALAY-PDADGRVVVTF----------DAEIP------RLSYQ 532
Query: 462 CLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSEL-----GVQFGTCLEAPHVIDVDLQV 516
LN A FK + + + SIIL GT+ P++ F + L +F + L HVI +
Sbjct: 533 LLNGAEHFKSIVDDARSIILAGGTMHPVSDFKTFLMPSLPASRFNS-LSCEHVIP-PTNL 590
Query: 517 LTSVISTGPDNYPLNASYKT---------------------ADG-------YKLMEKLCN 548
L + I+ GP ++ ++ DG Y + + +
Sbjct: 591 LATAITKGPSGQEMDFRFENRSKVDLLNELGMIIQNLVNLIPDGLVIFFPSYGYLNTVES 650
Query: 549 RWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNN 608
W+ +G R+ KK +F EPK + D + L Y +I S K G+
Sbjct: 651 HWKASGLLKRIEQKKKVFREPKEST--DVQATLDKYAEAILNKSD---------KMTGSI 699
Query: 609 DLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSGN 668
+ ++ + + LA RG +VG+PFP+ + + +K Y ++ N +GN
Sbjct: 700 LFAVVGAKLSEGINFSDNLA--RGIAMVGLPFPSPSP-ALEERKNYVRSFNKQANQDTGN 756
Query: 669 EWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDA 728
E NQ RA+NQ+IGR IRH+ D+ +IL+D+RF + + + W++KS+ +SF
Sbjct: 757 ELVMNQCMRAVNQSIGRAIRHQNDWAGLILIDKRFATSQIQNKLPGWIKKSVSVSNSFPQ 816
Query: 729 SLEGLKSFF 737
+++ + F+
Sbjct: 817 AIKTIAPFY 825
>gi|326433574|gb|EGD79144.1| hypothetical protein PTSG_09876 [Salpingoeca sp. ATCC 50818]
Length = 879
Score = 161 bits (407), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 102/313 (32%), Positives = 154/313 (49%), Gaps = 41/313 (13%)
Query: 123 STNGQTAQVAMNNKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYR-VPMAVLASRKHY 181
++ G Q +K+++ K P IF+ASRTH Q+ Q+ E ++AYR V M VL+SR+
Sbjct: 208 TSEGGGEQPLKRSKHLRPKRPPKIFFASRTHKQLEQITKELGRSAYRDVHMTVLSSREQT 267
Query: 182 CTNKYVRDKENIDEECKLLLGDRNLG-----CPQFKNVHKVRGHPSLQKGGCHEVHDIED 236
C + V +EECKL+L R G C + N K+ + + D+ED
Sbjct: 268 CIHPRVSKSPAKNEECKLMLEQRAFGGGGSGCAYYNNAQKL-----ASRRFRTQSWDLED 322
Query: 237 LVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIE 296
LV+ G+ +RGC YYA+R M A +VFCPY+Y+I+PVIR M+++ AI+ILDEAHNIE
Sbjct: 323 LVSAGKRIRGCPYYASREMLPSADIVFCPYNYLIDPVIRSTMDINPANAIIILDEAHNIE 382
Query: 297 DIARDAGSVDIDEDVL------LKLQMELEQVCSVNPMIY-------------------- 330
D+ARD+ S + + L L+ + P++Y
Sbjct: 383 DVARDSASTSLTVEALESAITDLQGAHGGDGSGGGAPILYETTGARARARAHEEEQVALA 442
Query: 331 ---QPLIEMTQDLVGWIERRKATLA-KREFQHFFSCWTGDKALRELQEANISRQCFPILL 386
Q L + LVGW ++ A KR++Q + +A+ L I +L
Sbjct: 443 EHVQRLTASLRALVGWAKQEITHPACKRDYQTKNRVFGASEAVASLSRYGIVPGTPSLLQ 502
Query: 387 ECATKAIKEATDT 399
E + K+ DT
Sbjct: 503 ESFNQLFKDTDDT 515
Score = 160 bits (406), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 82/213 (38%), Positives = 117/213 (54%), Gaps = 49/213 (23%)
Query: 540 YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRK 599
Y +++L RWR T Q+ LNA K +FVEP+ GS++DF+ +L +YN +S
Sbjct: 567 YSALDRLVERWRLTHQFHALNAVKRVFVEPRSGSKDDFDELLADFYNHVS---------- 616
Query: 600 KRVKREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNIN 644
GA F AVCRGK + VGIPFPNI
Sbjct: 617 ----------------------TGAVFFAVCRGKASEGIDFSNERARLVVTVGIPFPNIK 654
Query: 645 DIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQ 704
D++V++KK YND S + LL G EWY QAFRALNQA+GRCIRHR D+G ++++D RF+
Sbjct: 655 DLKVNMKKAYNDA-NSQRGLLRGAEWYDIQAFRALNQALGRCIRHRLDWGGLLMVDSRFR 713
Query: 705 EERNRAH-ISKWLRKSIKQYDSFDASLEGLKSF 736
+ +SKW+R+ + Q+ + + + L +F
Sbjct: 714 TKSKYVQSLSKWIRQRVHQFPTLNEAATSLNAF 746
Score = 68.6 bits (166), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 46/66 (69%), Gaps = 5/66 (7%)
Query: 15 LNAYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCS 74
+ Y + G ++ FP++PY SQ + + ++ LD+ +ALLESPTG+GKSL+LLC+
Sbjct: 1 MKEYQICGKRIVFPFKPYPSQFLLISAILKALDKGD-----NALLESPTGSGKSLALLCA 55
Query: 75 TLAWQQ 80
+LAWQ+
Sbjct: 56 SLAWQK 61
>gi|402594364|gb|EJW88290.1| hypothetical protein WUBG_00802 [Wuchereria bancrofti]
Length = 961
Score = 161 bits (407), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 103/330 (31%), Positives = 154/330 (46%), Gaps = 81/330 (24%)
Query: 458 LSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVL 517
+S WC+ P+V + D + S+IL SGTLSP ++F +ELG F +E +I D Q+
Sbjct: 635 ISFWCMRPSVAYLDAFKGCRSVILASGTLSPTDTFRTELGTTFQQEMEGNQIIP-DEQIF 693
Query: 518 TSVISTGPDNYPLNASYKTAD-----------------------------GYKLMEKLCN 548
+VI +GP L +Y+ + Y++++ +
Sbjct: 694 AAVIPSGPSGEKLCGTYRIINRDDRFIREISLILSHVCKIIPKGVLCFFSSYRVLDHIYE 753
Query: 549 RWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHY----YNSISQGSKCAVVRKKRVKR 604
TG ++ K + EP+ S V+ Y NS+ G +C
Sbjct: 754 YMETTGILRQIQNIKLVLKEPRRSSL--MNSVMMQYERAIVNSLDIGPQCT--------- 802
Query: 605 EGNNDLNTIESQENANKKGASFLAVCRGKI---------------VVGIPFPNINDIQVS 649
GA +AV RGK+ VGIPFPN D QV
Sbjct: 803 ------------------GALLMAVFRGKVSEGIDFTDDRARCVMTVGIPFPNAMDEQVI 844
Query: 650 LKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEER-- 707
KKKYND Y + +LSG+EWY QA+RALNQA+GRC+RHR D+G+I++LDER + R
Sbjct: 845 EKKKYNDDYCTKLQILSGDEWYTMQAYRALNQALGRCLRHRSDWGSILMLDERLLQTRTN 904
Query: 708 -NRAHISKWLRKSIKQYDSFDASLEGLKSF 736
N +S+W+RK ++ +++ L L +F
Sbjct: 905 PNAKKVSRWIRKQLRPLTNYEHFLSELANF 934
Score = 122 bits (305), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/189 (34%), Positives = 106/189 (56%), Gaps = 14/189 (7%)
Query: 145 TIFYASRTHSQISQVISEYKKTAYR----VPMAVLASRKHYCTNKYVRDKENIDEECKLL 200
TI+Y +RTH QISQV+ E+ + Y + +LASR+H C N +R ++I+ +CK
Sbjct: 239 TIYYGTRTHKQISQVVKEFSRLPYGKDGVMKHTILASREHMCINPAIRVNDDINSKCKEF 298
Query: 201 LGDRNLGCP-------QFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRG--CSYYA 251
+ +GC +++ +R + + V D+EDLV + C Y++
Sbjct: 299 ISSDGIGCSYKNSMRGKYERPSAIRRLIAQTTQKVNYVWDVEDLVEALKCSTPSLCPYFS 358
Query: 252 -ARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDED 310
AR + DDA ++FCP+SY+I+P+IR + +K I+ILDEAHN+ED+ R+A S E
Sbjct: 359 TARVLIDDADIIFCPFSYLIDPIIRTNSGLSLKNTIVILDEAHNVEDVCREAVSFTFMER 418
Query: 311 VLLKLQMEL 319
L+ +L
Sbjct: 419 ELVGAAADL 427
Score = 42.4 bits (98), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 37/66 (56%), Gaps = 7/66 (10%)
Query: 20 VGGIQVEFP--YQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLA 77
+ G ++ P QPY +Q + +++ +L +AL+ESPTG+GK+L LL ++
Sbjct: 64 ICGYIIKLPPNIQPYATQRTMIAKILISLK-----NKLNALIESPTGSGKTLGLLSASCG 118
Query: 78 WQQNCK 83
W + K
Sbjct: 119 WLERYK 124
>gi|392862459|gb|EAS36901.2| ATP-dependent RNA helicase CHL1 [Coccidioides immitis RS]
Length = 908
Score = 161 bits (407), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 180/709 (25%), Positives = 299/709 (42%), Gaps = 169/709 (23%)
Query: 146 IFYASRTHSQISQVISEYKKTAY--------------------RVP---------MAVLA 176
IFY SRTHSQ++Q E ++ + R P L
Sbjct: 244 IFYCSRTHSQLAQFARELRRVVFPPSIPPETEDGEIDTQGEGRRHPDTELEEPTKHVSLG 303
Query: 177 SRKHYCTNKYVRDKEN---IDEEC------KLLLGDRNLGCPQFKN---VHKVRGHPSLQ 224
SRK C N VR N I+E C +L G + P +N ++ R H
Sbjct: 304 SRKTMCINPKVRRLGNATAINERCLDLQSSNVLPGHKCPFAPSKENELAINDFRDHV--- 360
Query: 225 KGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKG 284
EVHDIED+ +GQ C YYA+RS+ +++V PY ++ R A+++ +K
Sbjct: 361 ---LAEVHDIEDIGKIGQRTGICPYYASRSVIGHSEIVTLPYQLLLQKSARDALDISLKD 417
Query: 285 AILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQVCSVNPMIYQP--------LIEM 336
++I+DEAHN+ D+ + SV++ L +L++ LEQ+ ++ Y+ +
Sbjct: 418 HVIIIDEAHNLMDVIANIHSVNVS---LTQLRIGLEQL-TIYARKYKARLKGKNRVYVAQ 473
Query: 337 TQDLVGWIERR-KATLAKREFQH------FFSCWTG------DKALRELQEANISRQCFP 383
L+G I + ++ LA RE + + G K R LQE+ ++R+
Sbjct: 474 VMRLLGSIAKYLESVLAARELREGAVDPSYLMSGKGIDQINLHKLSRYLQESKLARKV-D 532
Query: 384 ILLECATKAIKEATDTESELPHLSGMSVITLEGLFSSLT--YFFSRNGSHVSDYQLALQK 441
+E +T ++ +T + +P L + L + S FF +NG+ V L K
Sbjct: 533 GYIESSTSLEEKNPETSTTVPVLFQVQSFLLSLMNPSAEGRLFFEKNGNDV------LLK 586
Query: 442 YIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFG 501
Y L+P F++ E + ++IL GT+SPM+ + L
Sbjct: 587 YT------------------LLDPTAHFREAVEEARAVILAGGTMSPMSDYRDHLFSYLA 628
Query: 502 ----TCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYK---------------------T 536
HVI + +S G + + +++ T
Sbjct: 629 PGQLRTFSYGHVIPTS-NLSARPVSRGILDTEFDFTFEKRNSRAMIIDLGKTISEICKAT 687
Query: 537 ADG-------YKLMEKLCNRWRE----TGQWSRLNA---KKPLFVEPKGGSQEDFEIVLK 582
DG Y + ++ W++ +G S L++ KPL E K + + E +L+
Sbjct: 688 PDGVVAFFPSYDFLNQVVEIWKQPCSNSGNPSILDSLGLVKPLLYESKEKAM-NTEALLQ 746
Query: 583 HYYNSISQGSKCAVVRKKRVK-REGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFP 641
Y N I +G ++ K EG N +++ G RG IV+G+PF
Sbjct: 747 KYANFIDEGKGALLLSVMGGKLSEGIN---------FSDRLG-------RGVIVIGLPFA 790
Query: 642 NINDIQVSLKKKYND--TY---------RSSKNLLSGNEWYCNQAFRALNQAIGRCIRHR 690
NI + K +Y + TY R SK L+G ++Y N R +NQ IGR IRH+
Sbjct: 791 NIRSAEWQAKIQYVERKTYERSSGGEETRRSKAKLAGRDFYENACMRVVNQCIGRAIRHQ 850
Query: 691 FDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFRD 739
DY AI++ D R+ R ++ + +W+R+S+ A++ L +FF +
Sbjct: 851 HDYAAILMFDRRYGTARIQSKLPEWIRRSLISA-PIGATISNLYTFFEE 898
>gi|389744669|gb|EIM85851.1| DNA repair helicase [Stereum hirsutum FP-91666 SS1]
Length = 875
Score = 160 bits (406), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 176/758 (23%), Positives = 309/758 (40%), Gaps = 189/758 (24%)
Query: 111 FIPESQPSTIPPSTNGQTAQVAMNNKNVKKKMTPTIFYASRTHSQISQVISEYKK----- 165
++PE + PS +T+ K+ ++ I+Y+SRTHSQ+SQ+I E ++
Sbjct: 175 YLPEESHDSELPSFLARTSSSYSQRKSEERPPCTKIYYSSRTHSQLSQIIPELRRLKRNR 234
Query: 166 ---------------TAYRVPMAV---------------------------LASRKHYCT 183
T+ P ++ L SRK C
Sbjct: 235 QNPPATGHMSAASHTTSLPQPSSLKRGYQALASDNDDDDVFVSQQQTRAVSLGSRKQLCI 294
Query: 184 NKYVRDKE-NIDEECKLLLGDR-NLGCPQF-KNVHKVRGHPSLQKGGCHEVHDIEDLVNV 240
N+ +R K ++DE C+ L+ + GCP ++ +R H L+ DIE+LV+V
Sbjct: 295 NEDLRAKGGDLDERCRDLMNSKKGHGCPYLPRDEDDMRLH-DLRDQILAAPKDIEELVSV 353
Query: 241 GQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIAR 300
+ R C Y+A+R A+LV PY+ ++ P R A+ ++++ ++++DEAHN
Sbjct: 354 AKESRTCPYFASREAVSQAELVTMPYNLLLQPSARDALGINLQDQVIVIDEAHN------ 407
Query: 301 DAGSVDIDEDVLLKLQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFF 360
L+ + L V M YQ L + + ++ + + L+ R H
Sbjct: 408 -----------LISTILSLSTVS----MTYQNLKDSMDQISTYLSKFRLRLSSRHMLHLT 452
Query: 361 SCWTGDKAL-------RELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVIT 413
T KA R Q+ + + + +A+ + D +
Sbjct: 453 RLHTFLKAFMAFIIKWRSQQKLGNEQHAVVMTVGEVMRALGQNIDA------------VN 500
Query: 414 LEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNP----------------------- 450
L ++ L S+ VS Y Q ++DS++
Sbjct: 501 LLEIYEYLRS--SKIARKVSAYSTQFQPSQRKDSESDFLKPSLHVIESFITSITQAADDG 558
Query: 451 -------GGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGV----- 498
+ +++ CLNP+ F+ + + + SIIL GTLSP ++L
Sbjct: 559 RLLLSSCADVESFSITYQCLNPSPQFQALVDSAQSIILAGGTLSPTEDIITQLFYYLPSS 618
Query: 499 ---QFGTCLEAPHVI-DVDLQVLTSVISTGPDNYPLNASY-------------------- 534
QF +CL H+I +LQ L ++ GP N L ++
Sbjct: 619 RISQF-SCL---HIIPKSNLQAL--IVGYGPRNSDLKFTHSNLSTKGLIDELGQAILNLI 672
Query: 535 KTADG--------YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYN 586
++ G YK++ + W++ +S L +K+ LFVEP GS+ E VL Y
Sbjct: 673 RSVPGGVVIFFSSYKVLHMALSTWKKGHLFSALESKRELFVEPSDGSE--VESVLDAY-- 728
Query: 587 SISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDI 646
S++ + + + + LN ++ + R ++VG+PF N+N +
Sbjct: 729 SLATQKPRGALLFAVIGAKLSEGLNFSDN-------------LARMVVIVGLPFANLNSL 775
Query: 647 QVSLKKKYND----TYRSSKNL--LSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLD 700
++ + +Y D T SS + L+G Y N A+NQ+IGR IRH+ D+ ++ILLD
Sbjct: 776 ELKERLRYADHIQGTLPSSNSPFGLAGTYLYENLCMNAVNQSIGRAIRHKDDWASLILLD 835
Query: 701 ERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
R+Q R + W++ + SF S++ + F R
Sbjct: 836 SRYQNSRIYNKLPTWIKDVVISSTSFGQSVQLINQFMR 873
Score = 47.4 bits (111), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 35/58 (60%), Gaps = 6/58 (10%)
Query: 27 FPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCK 83
FPY +PY QL M + + ++ G A++ESPTGTGK+LSLL +T W + K
Sbjct: 25 FPYPEPYNIQLDLMRHLYAAIE-----GRKVAIVESPTGTGKTLSLLSATFTWLDDNK 77
>gi|449482368|ref|XP_002193292.2| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8-like [Taeniopygia guttata]
Length = 913
Score = 160 bits (405), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 178/706 (25%), Positives = 289/706 (40%), Gaps = 151/706 (21%)
Query: 146 IFYASRTHSQISQVISEYKKTAY--RVPMAVLASRKHYCTNKYVRDK---ENIDEECKLL 200
I+Y SRTHSQ+SQ + E +K+ + + + L SR++ C N+ VR + I++ C +
Sbjct: 212 IYYCSRTHSQLSQFVHEVQKSPFGKNIRLVSLGSRQNLCVNEEVRRLGALQLINDRCMEM 271
Query: 201 LGDR--------NLG---------CP--QFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVG 241
++ N G CP F+ + +R + EV DIE LV++G
Sbjct: 272 QKNKHEKKSSEENEGKKRRVSRAMCPFYSFEQMQFLRDEVLV------EVKDIEQLVSLG 325
Query: 242 QVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARD 301
+ + C YY +R AQLV PY +++ R A + +K ++I+DEAHN+ D
Sbjct: 326 RETKACPYYGSRFAIPAAQLVVLPYQMLLHEPTRNAAGIKLKDQVVIIDEAHNLIDTITC 385
Query: 302 AGSVDIDEDVLLKLQMELEQ--------VCSVNPMIYQPLIEMTQDLVGWIE-------- 345
S ++ L +L Q + + N M + ++ + + V +
Sbjct: 386 IHSAEVSGSQLCCAHSQLSQYMERYRKHLKAKNLMYIKQILYLLEQFVAMLGGNVNQNPG 445
Query: 346 ----RRKATLAKREFQHFFSCWTGD----KALRELQEANISRQCFPILLECATKAIKEAT 397
T+ K F T + K R +++ ISR+ + A A
Sbjct: 446 CQAVSETGTVLKSINDFLFQSQTDNINLFKVQRYCEKSLISRKLLGFVERYGGSA--SAV 503
Query: 398 DTESELPHLSGMS--VITLE-------GLFSSLTYFFSRNGSHVSDYQLALQKYIK---- 444
T E L+G+ ++TL+ G S N S + ++ ++
Sbjct: 504 KTSKENQKLAGLQDFLLTLQRGSDKEAGTPQSPPVEAEHNQLQTSSPLMQIEGFLSALTN 563
Query: 445 -----RDSKNPGGNWTHT-LSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSEL-- 496
R N G H+ L LNPAV F V E ++I+ GT+ P+ F +L
Sbjct: 564 ANQDGRVILNRQGTVGHSSLKFLLLNPAVHFAKVVEECRAVIIAGGTMQPVADFREQLLC 623
Query: 497 --GVQFGTCLE--APHVIDVDLQVLTSVISTGPDNYPLNASYKTADGYKLMEK------- 545
GV +E HVI + +L ++ +GP N L +Y+T D ++M++
Sbjct: 624 RAGVDPARIVEFSCGHVIPPE-NILPIILCSGPSNQQLEFTYQTRDLPQMMDETGRILSN 682
Query: 546 LCN---------------------RWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHY 584
LCN W +TG SRL +KK +F EPK +Q E VL Y
Sbjct: 683 LCNVIPGGVVCFFPSYEYEKQVYGHWEKTGLLSRLASKKKIFQEPKKANQ--VEQVLVEY 740
Query: 585 YNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGK----------- 633
I KC SQ GA L+V GK
Sbjct: 741 AKCI----KCC-------------------SQTGGQMTGALLLSVVGGKMSEGINFSDDL 777
Query: 634 ----IVVGIPFPNINDIQVSLKKKYND-TYRSSKNLLSGNEWYCNQAFRALNQAIGRCIR 688
I+VG+P+PNI ++ K + D T + N +A+NQ+IGR IR
Sbjct: 778 GRCVIMVGMPYPNIRSPELQEKMTWLDKTMPRAAGQAPSRVLIENLCMKAVNQSIGRAIR 837
Query: 689 HRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLK 734
H+ D+ +I+LLD R+ + +W+R+ + +F ++ L+
Sbjct: 838 HQKDFASILLLDHRYTRPAIFNKLPQWIRERTQVKPAFGSAFAELR 883
Score = 50.4 bits (119), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 32/52 (61%), Gaps = 5/52 (9%)
Query: 27 FPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
FPY PY Q FM + L+ A R G + ESPTGTGKSLSL+C L+W
Sbjct: 7 FPYTPYRIQEQFMEALYGALE-AGRVG----IFESPTGTGKSLSLICGALSW 53
>gi|403223632|dbj|BAM41762.1| helicase [Theileria orientalis strain Shintoku]
Length = 954
Score = 160 bits (404), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 111/327 (33%), Positives = 178/327 (54%), Gaps = 52/327 (15%)
Query: 19 HVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
++GGI V+FPY+PY Q FM VI +A +DG +ALLESPTGTGK+LSL+C++LA
Sbjct: 10 NIGGIDVKFPYEPYELQKSFMESVI----KAIKDGK-NALLESPTGTGKTLSLICASLA- 63
Query: 79 QQNCKLKNQLANISHSKPDTE--------AVTDPLANGGGFIPE--SQPSTIPPSTNGQT 128
C L N+ I K E + L + G I + +P +I
Sbjct: 64 ---CILSNKTNKILGGKTLEEEKKVNQDDILVSQLISLKGAIEKDLKKPKSI-------- 112
Query: 129 AQVAMNNKNVKKKMTPTIFYASRTHSQISQVISEYKKTAY-------RVPMAVLASRKHY 181
++NK I Y SRTHSQ+ QVISE +K++Y + A+LASR
Sbjct: 113 ----LSNK-------MNIIYTSRTHSQLKQVISEVRKSSYCKEFHQKGLKAALLASRDLL 161
Query: 182 CTN--KYVRDKENIDEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVN 239
C N K ++++ C+LL+ +R C + + +RG + ++ +E+ DIED+V
Sbjct: 162 CINPAKGNLSGDHLNNFCRLLVQNRK--CIYY---NSLRGSKNNEEAQFNELVDIEDMVK 216
Query: 240 VGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIA 299
+G+ C Y+A + ++A L+ PY+Y+++P +R AM++ K +I+I+DEAHN+E +A
Sbjct: 217 MGKRGTFCPYFAVKDAQENADLILVPYNYLLSPSVRDAMDLKTKNSIVIIDEAHNVESVA 276
Query: 300 RDAGSVDIDEDVLLKLQMELEQVCSVN 326
+A S + + L K L++ + +
Sbjct: 277 EEASSFFVKQTDLAKFIEALKRFATFH 303
Score = 118 bits (295), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 98/333 (29%), Positives = 153/333 (45%), Gaps = 79/333 (23%)
Query: 458 LSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELG---VQFGTCLEAPHVIDVD 513
++ CL P F + L S+ILTSGTL P++ +G ++F L+ HVID
Sbjct: 515 MNFACLQPIPTFIRIKREGLRSLILTSGTLGPLDVLERHIGGNYLKFEIKLQNDHVIDPK 574
Query: 514 LQVLTSVISTGPDNYP--LNASYK--------TADG--------------------YKLM 543
+V V+ TG D P L+++Y TA G Y +M
Sbjct: 575 -RVWAGVV-TGNDEDPNILSSAYNKRGDLNYITALGRALYGFIKSVPSGVLVFFGSYMVM 632
Query: 544 EKLCNRWRETGQWSRLNAKKPLFVE--PKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKR 601
+ W+ G +S++ +K +FVE P G +++ + I + ++ R K
Sbjct: 633 NNTLSCWKRLGLYSKMEMEKSIFVENRPPGFVRDN---------DIIPESTQALFTRYK- 682
Query: 602 VKREGNNDLNTIESQENANKKGASFLAVCRGKI---------------VVGIPFPNINDI 646
+ I+S + + F A+CRG++ + GIP+P+ +
Sbjct: 683 ---------DNIDSG-----RASMFFAICRGRMAEGIDFSDDYCRGIFLCGIPYPSRYED 728
Query: 647 QVSLKKKYND--TYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQ 704
+LK Y D + + +NL +EWY QA +A+NQAIGR IRH DYGAI+L D RF+
Sbjct: 729 TTALKMDYLDKLSVATGENLNLSHEWYTTQAIKAINQAIGRSIRHIEDYGAIMLADYRFR 788
Query: 705 EERNRAHISKWLRKSIKQYDSFDASLEGLKSFF 737
+ ISKW+ +K Y + +E L SFF
Sbjct: 789 FPPVKTSISKWVLDRLKVYTKIEDCMEELSSFF 821
>gi|170579413|ref|XP_001894820.1| BRCA1-binding helicase-like protein BACH1 [Brugia malayi]
gi|158598443|gb|EDP36331.1| BRCA1-binding helicase-like protein BACH1, putative [Brugia malayi]
Length = 962
Score = 160 bits (404), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 104/330 (31%), Positives = 154/330 (46%), Gaps = 81/330 (24%)
Query: 458 LSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVL 517
+S WC+ P++ + D + S+IL SGTLSP ++F +ELG F +E +I D Q+
Sbjct: 654 ISFWCMRPSLAYIDAFKGCRSVILASGTLSPTDTFRTELGTTFQQEMEGNQIIP-DEQIF 712
Query: 518 TSVISTGPDNYPLNASYKTAD-----------------------------GYKLMEKLCN 548
+VI +GP L +Y+ + Y++++++
Sbjct: 713 AAVIPSGPSGEKLCGTYRIINRDDRFIREISLILSHVCKIIPKGVLCFFSSYRVLDQIYE 772
Query: 549 RWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHY----YNSISQGSKCAVVRKKRVKR 604
TG ++ K + EP+ S V+ Y NS+ G +C
Sbjct: 773 YMETTGILRQIQNVKLVLKEPRRSSL--MNTVMMQYERAIVNSLDIGPQCT--------- 821
Query: 605 EGNNDLNTIESQENANKKGASFLAVCRGKI---------------VVGIPFPNINDIQVS 649
GA +AV RGKI VGIPFP+ D QV
Sbjct: 822 ------------------GALLMAVFRGKISEGIDFTDDRARCVVTVGIPFPSAVDEQVI 863
Query: 650 LKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERF---QEE 706
KKKYND Y + LLSG+EWY QA+RALNQA+GRC+RHR D+G+I++LDER Q
Sbjct: 864 EKKKYNDDYCTKLQLLSGDEWYTMQAYRALNQALGRCLRHRSDWGSILMLDERLLQTQAN 923
Query: 707 RNRAHISKWLRKSIKQYDSFDASLEGLKSF 736
N IS+W+RK ++ +++ L L +F
Sbjct: 924 PNAKKISRWIRKQLRPLTNYEHFLNELANF 953
Score = 119 bits (298), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 107/190 (56%), Gaps = 16/190 (8%)
Query: 145 TIFYASRTHSQISQVISEYKKTAYR----VPMAVLASRKHYCTNKYVRDKENIDEECKLL 200
TI+Y +RTH QISQV+ E+ + Y + +LASR++ C N ++ ++I+ +CK
Sbjct: 237 TIYYGTRTHKQISQVVKEFSRLPYSQDGVIKHTILASREYMCINPAIQVNDDINSKCKEF 296
Query: 201 LGDRNLGCPQFKNVHK--------VRGHPSLQKGGCHEVHDIEDLVNVGQVVRG--CSYY 250
+ +GC +KN + +R + + V D+EDLV + C Y+
Sbjct: 297 ISSDGIGC-SYKNAMRGKYEKPGAIRRLIAQTTRKVNYVWDVEDLVEALKCSTPSLCPYF 355
Query: 251 A-ARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDE 309
+ AR + DDA ++FCP+SY+I+P++R + +K I+ILDEAHN+ED+ R+A S E
Sbjct: 356 STARVLIDDADIIFCPFSYLIDPIVRTNSGLSLKNTIVILDEAHNVEDVCREAVSFTFME 415
Query: 310 DVLLKLQMEL 319
L+ +L
Sbjct: 416 RELVGAAADL 425
Score = 44.7 bits (104), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 7/66 (10%)
Query: 20 VGGIQVEFP--YQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLA 77
+ G ++ P QPY +Q + +++ +L +AL+ESPTG+GK+L LL ++ A
Sbjct: 64 ICGYMIKLPPNIQPYATQRTMIAKILISLK-----NKLNALIESPTGSGKTLGLLSASCA 118
Query: 78 WQQNCK 83
W + K
Sbjct: 119 WLERYK 124
>gi|393908189|gb|EJD74948.1| CBR-DOG-1 protein [Loa loa]
Length = 979
Score = 159 bits (403), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 101/330 (30%), Positives = 156/330 (47%), Gaps = 81/330 (24%)
Query: 458 LSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVL 517
+S WC+ P++ + D + S+IL SGTLSP ++F +ELG F +E +I D Q+
Sbjct: 653 ISFWCMRPSLAYTDAFKGCRSVILASGTLSPTDTFRTELGTTFHQEMEGNQIIP-DEQIF 711
Query: 518 TSVISTGPDNYPLNASYKTAD-----------------------------GYKLMEKLCN 548
+VI +GP+ L +Y+ + Y++++++
Sbjct: 712 AAVIPSGPNGEKLCGTYRIINRDDRFIREISLILSHVCKIIPKGVLCFFSSYRVLDQIYE 771
Query: 549 RWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQ----GSKCAVVRKKRVKR 604
TG ++ K + EP+ S V+ Y N+I G +C
Sbjct: 772 YMETTGILRQIQNIKLVLKEPRRSSL--MNTVMMQYENAIVNSFDFGPQCT--------- 820
Query: 605 EGNNDLNTIESQENANKKGASFLAVCRGKI---------------VVGIPFPNINDIQVS 649
GA +AV RGK+ VGIPFP+ D QV
Sbjct: 821 ------------------GALLMAVFRGKVSEGIDFTDDRARCVVTVGIPFPSAMDEQVV 862
Query: 650 LKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEER-- 707
KKKYND Y + +LSG+EWY QA+RALNQA+GRC+RHR D+G+I++LDER + R
Sbjct: 863 EKKKYNDDYCTKLRILSGDEWYTMQAYRALNQALGRCLRHRSDWGSILMLDERLLQIRAN 922
Query: 708 -NRAHISKWLRKSIKQYDSFDASLEGLKSF 736
N +S+W+R+ ++ +++ L L SF
Sbjct: 923 PNAKKVSRWIREQLRPLTNYEHFLSELTSF 952
Score = 145 bits (366), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/372 (27%), Positives = 169/372 (45%), Gaps = 76/372 (20%)
Query: 20 VGGIQVEFP--YQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLA 77
+ G V+ P QPY +Q + ++++ L +AL+ESPTG+GK+L LL ++ A
Sbjct: 61 ICGYMVKLPPNIQPYATQRTMIAKILTALK-----NKLNALIESPTGSGKTLGLLSASCA 115
Query: 78 WQQN--------------CKLKNQLANISHSKP---DTEAVTDPLANGGGFIPESQPSTI 120
W + C+ H+ D D L NG +S + I
Sbjct: 116 WLERYKKERTQSRNECKACRSGGSGGGGGHTDNQTLDQSTFFDEL-NGADLSDKSGMNNI 174
Query: 121 PP----------------------------STNGQTAQVAMNNKNVKKKMTP-------- 144
+TN ++++ + KK
Sbjct: 175 SAECTYEAQSFSTLEDEFENDFCVVTSFSSTTNKLEGVASLDDSKISKKDAEEGHTCLPR 234
Query: 145 -TIFYASRTHSQISQVISEYKKTAYR----VPMAVLASRKHYCTNKYVRDKENIDEECKL 199
TI+Y +RTH QISQV+ E+ + +Y + +LASR+H C N +R ++I+ +CK
Sbjct: 235 VTIYYGTRTHKQISQVVKEFSRLSYGQEGVIKHTILASREHMCINPAIRVSDDINGKCKE 294
Query: 200 LLGDRNLGCP-------QFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRG--CSYY 250
+ +GC +++ VR + G + + D+EDLV + C Y+
Sbjct: 295 FISSDGIGCSYKNSMRGKYERPSAVRRLVAQTTGQMNYIWDVEDLVKALKCSTPSLCPYF 354
Query: 251 A-ARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDE 309
+ AR + DDA ++FCP+SY+I+P+IR + +K ++ILDEAHN+ED+ R+A S E
Sbjct: 355 STARVLIDDADIIFCPFSYLIDPIIRANSGLSLKNTVVILDEAHNVEDVCREAVSFTFME 414
Query: 310 DVLLKLQMELEQ 321
L+ +L Q
Sbjct: 415 RELVGATADLYQ 426
>gi|317032533|ref|XP_001395061.2| ATP-dependent RNA helicase CHL1 [Aspergillus niger CBS 513.88]
Length = 834
Score = 159 bits (402), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 183/722 (25%), Positives = 298/722 (41%), Gaps = 148/722 (20%)
Query: 79 QQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNV 138
+++ K +++LA+ S P T + + + Q ST P ++ +N V
Sbjct: 156 EEHSKPRDELAHTSELSPSTLELLERF--------KGQISTAKPGSDD------ADNDEV 201
Query: 139 KKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKEN---IDE 195
K IFY SRTHSQ++Q E ++ RV L SRK+ C N V EN I+E
Sbjct: 202 K------IFYCSRTHSQLTQFAGE-EELEERVKHVTLGSRKNLCINPRVSSLENATAINE 254
Query: 196 ECKLLLGDRNLG----CPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYA 251
C L L N+ CP + R + V DIEDL +G+ + C YYA
Sbjct: 255 RC-LDLQQPNVNPQHRCPFLPSKEDERQVLQFRDHALSTVKDIEDLGKLGKKIGICPYYA 313
Query: 252 ARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDV 311
+RS+ D+++V PY ++ R A+ +KG ++I+DEAHN+ D + SV +
Sbjct: 314 SRSVVKDSEIVTLPYPLLLQRSAREALNSSVKGHVIIIDEAHNLMDAISNIHSVTV---T 370
Query: 312 LLKLQMELEQVC---------------SVNPMIYQPLIEMTQDLVGWIERRKATLAKREF 356
L +LQ L Q+ S + + L + L +E KA
Sbjct: 371 LSQLQTSLSQLTIYGRKFKTRLKGKNRSYVAQVIRLLSSIAAHLRSLLESGKAPEGPVLI 430
Query: 357 QHFFSCWTGD-----KALRELQEANISRQCFPILLECATKAIKEATD--TESELPHLSGM 409
S D K R LQE+ ++R+ + + K+A+ T L H+ G
Sbjct: 431 SELMSGKGVDQINPYKLSRYLQESKLARKVDGYVEFTRDPSDKQASRSPTVPVLFHIQGF 490
Query: 410 SVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVF 469
+++L + F+S+ D QL KY+ L+P F
Sbjct: 491 -LLSLMNPSAEGRLFYSKEQ---GDIQL---KYM------------------LLDPTNQF 525
Query: 470 KDVAELSLSIILTSGTLSPMNSFSSELGVQFGT----CLEAPHVIDVDLQVLTSVISTGP 525
+++ E + +IIL GT+SPM + + L HVI + ++ + G
Sbjct: 526 RELVEDARAIILAGGTMSPMTDYMNHLFSYVPASRLDTFSYGHVIPPE-NLIAHTLVRGV 584
Query: 526 DNYPLNASYKTAD----------------------------GYKLMEKLCNRWR-----E 552
+ +Y D Y + ++ N W+ E
Sbjct: 585 QGSEFDFTYDARDSEKMIMDLGRTIATLCHVIPDGVVAFFPSYDYLGRVLNIWKKPMLGE 644
Query: 553 TGQ--WSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVK-REGNND 609
GQ ++ + KKP+ E + + E+ L Y N++ G ++ K EG N
Sbjct: 645 QGQTVYNLIGQKKPILSESRDMTVTTEEL-LHTYANTVDSGRGALLLSVVGGKLSEGIN- 702
Query: 610 LNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKY-----------NDTY 658
++K G RG ++VG+PFPNI K +Y ++
Sbjct: 703 --------FSDKLG-------RGVLIVGLPFPNIRSAVWQAKIQYIEQKTHQQATGSEAS 747
Query: 659 RSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRK 718
R +G ++Y N RA+NQ IGR IRHR DY AI+L+D R+++ +A + W+++
Sbjct: 748 RQLAAKAAGRDFYENSCMRAVNQCIGRAIRHRNDYAAIVLVDRRYEKPGIQAKLPAWIKQ 807
Query: 719 SI 720
S+
Sbjct: 808 SM 809
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 5/56 (8%)
Query: 28 PYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCK 83
PY PY QL M + S L++ + A+ ESPTGTGKSLSL+C +L W ++ K
Sbjct: 11 PYSPYDIQLQLMRALYSCLEQGKV-----AVFESPTGTGKSLSLICGSLTWLRDHK 61
>gi|428183991|gb|EKX52847.1| hypothetical protein GUITHDRAFT_39398, partial [Guillardia theta
CCMP2712]
Length = 719
Score = 159 bits (402), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 102/334 (30%), Positives = 159/334 (47%), Gaps = 80/334 (23%)
Query: 457 TLSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQ 515
+L WC + V +D+ + + +I+L SGTLSPM+S+S E+ ++F LE HVI D Q
Sbjct: 417 SLGYWCFSAGVTMRDILQQGVRNIVLASGTLSPMSSWSIEMEMKFEVVLENEHVIS-DEQ 475
Query: 516 VLTSVISTGPDNYPLNASYKTADGYKLMEKLCN--------------------------- 548
+ +V+ GP LN+SY+ D +++ L N
Sbjct: 476 IFAAVLRRGPRGTVLNSSYRNKDNKEMIHDLGNVIVNTCRIVPDGLLVFFPSYSALTNTI 535
Query: 549 -RWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGN 607
W+ G W R+ K +FVEP+ + +F+ + Y ++V ++G+
Sbjct: 536 QEWQNVGIWDRIARHKHVFVEPRESA--NFKATVTAY--------------TEQVDKQGS 579
Query: 608 NDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKK 652
GA +AVCRGK I+ G+PFP + D +V LK+
Sbjct: 580 --------------VGAILMAVCRGKMSEGIDFADRHGRAVIITGLPFPALLDPRVVLKR 625
Query: 653 KYNDTY-----RSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEER 707
Y D + S ++G +WY QA RA+NQAIGR IRH+ D+GAI+L DERF
Sbjct: 626 SYMDEVAGRQPKDSSTTVNGEKWYMQQAARAVNQAIGRVIRHKEDFGAILLCDERFAGWT 685
Query: 708 NRAHISKWLRKSIKQYDSFDASLEGLKSFFRDVK 741
+ +S+W++ I+ D F + L +FF+ K
Sbjct: 686 RQPLLSRWVQGRIEVKDEFGPVTQQLANFFQKHK 719
Score = 157 bits (396), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 105/291 (36%), Positives = 148/291 (50%), Gaps = 46/291 (15%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
V G++VEFP++PYGSQ+ + +I L R HALLESPTGTGK+L LLC L W
Sbjct: 1 VRGVRVEFPFRPYGSQVRLLEALIDALSAPGR----HALLESPTGTGKTLCLLCGVLGW- 55
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIP-PSTNGQTAQVAMNNKNV 138
KN S S E + P PS P PS+ G + V
Sbjct: 56 -----KNSSKVSSQSSLPPELASLP------------PSMHPLPSSPGSSRLV------- 91
Query: 139 KKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENI--DEE 196
Y SRTH Q++QV+ E + ++Y+ MAVL SR+ C + V +
Sbjct: 92 ---------YMSRTHGQLTQVVRELRASSYKPRMAVLGSRQQLCIHPEVSKLRGSAQNAA 142
Query: 197 CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMA 256
C L+G + C ++NV H +K E+ DIEDL G + C YY +R ++
Sbjct: 143 CSKLVGAQ--ACGYYRNVMD---HKHERKEVVEELMDIEDLCKHGTTHKVCPYYLSRDLS 197
Query: 257 DDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDI 307
DA++VF PY+Y+ +P R ++ K +I+++DEAHN+E I DA S DI
Sbjct: 198 SDAEVVFMPYNYLTDPASRKSLLHLWKDSIVVIDEAHNMETICSDAASFDI 248
>gi|312076541|ref|XP_003140907.1| hypothetical protein LOAG_05322 [Loa loa]
Length = 704
Score = 158 bits (400), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/330 (30%), Positives = 156/330 (47%), Gaps = 81/330 (24%)
Query: 458 LSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVL 517
+S WC+ P++ + D + S+IL SGTLSP ++F +ELG F +E +I D Q+
Sbjct: 378 ISFWCMRPSLAYTDAFKGCRSVILASGTLSPTDTFRTELGTTFHQEMEGNQIIP-DEQIF 436
Query: 518 TSVISTGPDNYPLNASYKTAD-----------------------------GYKLMEKLCN 548
+VI +GP+ L +Y+ + Y++++++
Sbjct: 437 AAVIPSGPNGEKLCGTYRIINRDDRFIREISLILSHVCKIIPKGVLCFFSSYRVLDQIYE 496
Query: 549 RWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQ----GSKCAVVRKKRVKR 604
TG ++ K + EP+ S V+ Y N+I G +C
Sbjct: 497 YMETTGILRQIQNIKLVLKEPRRSSL--MNTVMMQYENAIVNSFDFGPQCT--------- 545
Query: 605 EGNNDLNTIESQENANKKGASFLAVCRGKI---------------VVGIPFPNINDIQVS 649
GA +AV RGK+ VGIPFP+ D QV
Sbjct: 546 ------------------GALLMAVFRGKVSEGIDFTDDRARCVVTVGIPFPSAMDEQVV 587
Query: 650 LKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEER-- 707
KKKYND Y + +LSG+EWY QA+RALNQA+GRC+RHR D+G+I++LDER + R
Sbjct: 588 EKKKYNDDYCTKLRILSGDEWYTMQAYRALNQALGRCLRHRSDWGSILMLDERLLQIRAN 647
Query: 708 -NRAHISKWLRKSIKQYDSFDASLEGLKSF 736
N +S+W+R+ ++ +++ L L SF
Sbjct: 648 PNAKKVSRWIREQLRPLTNYEHFLSELTSF 677
Score = 90.5 bits (223), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 82/150 (54%), Gaps = 10/150 (6%)
Query: 182 CTNKYVRDKENIDEECKLLLGDRNLGCP-------QFKNVHKVRGHPSLQKGGCHEVHDI 234
C N +R ++I+ +CK + +GC +++ VR + G + + D+
Sbjct: 2 CINPAIRVSDDINGKCKEFISSDGIGCSYKNSMRGKYERPSAVRRLVAQTTGQMNYIWDV 61
Query: 235 EDLVNVGQVVRG--CSYYA-ARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDE 291
EDLV + C Y++ AR + DDA ++FCP+SY+I+P+IR + +K ++ILDE
Sbjct: 62 EDLVKALKCSTPSLCPYFSTARVLIDDADIIFCPFSYLIDPIIRANSGLSLKNTVVILDE 121
Query: 292 AHNIEDIARDAGSVDIDEDVLLKLQMELEQ 321
AHN+ED+ R+A S E L+ +L Q
Sbjct: 122 AHNVEDVCREAVSFTFMERELVGATADLYQ 151
>gi|74203152|dbj|BAE26258.1| unnamed protein product [Mus musculus]
Length = 527
Score = 158 bits (400), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 98/291 (33%), Positives = 156/291 (53%), Gaps = 32/291 (10%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ G+ V+FP+QPY Q +M +V+ L + + +LESPTGTGK+L LLCSTLAWQ
Sbjct: 6 LNGVTVDFPFQPYPCQQEYMTKVLECLQKK-----VNGILESPTGTGKTLCLLCSTLAWQ 60
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVK 139
Q+ L++ ++++ ++ G F + S + + +
Sbjct: 61 QH--LRDAVSSLKIAER---------VQGELFASRTLSSWGSAAAASGDSIECYTD---- 105
Query: 140 KKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE--- 196
P I YASRTHSQ++QVI E + TAYR + VL SR+ C + V+ +E+ +
Sbjct: 106 ---IPKIIYASRTHSQLTQVIRELRNTAYRPKVCVLGSREQLCIHPEVKKQESNHMQISL 162
Query: 197 CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMA 256
C+ + R+ C + NV L++ + DIEDLV G + C YY +R+M
Sbjct: 163 CRKKVASRS--CHFYNNVEA----KFLEQDLATPILDIEDLVKNGSKQKMCPYYLSRNMK 216
Query: 257 DDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDI 307
A ++F PY+Y+++ R A +D+KG ++I DEAHN+E I ++ S D+
Sbjct: 217 QQADIIFMPYNYLLDAKSRKAHSIDLKGTVVIFDEAHNVEKICEESASFDL 267
>gi|150863715|ref|XP_001382279.2| YPL008W (CHL1)-like protein [Scheffersomyces stipitis CBS 6054]
gi|206558237|sp|A3LN13.2|CHL1_PICST RecName: Full=ATP-dependent RNA helicase CHL1; AltName:
Full=Chromosome loss protein 1
gi|149384971|gb|ABN64250.2| syntenic [Scheffersomyces stipitis CBS 6054]
Length = 835
Score = 157 bits (398), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 173/725 (23%), Positives = 305/725 (42%), Gaps = 143/725 (19%)
Query: 92 SHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKKMTPT-IFYAS 150
S KP+ + +T + ES+ S + NG+T ++ M N P I+++S
Sbjct: 166 SEVKPNADKLT---------VLESEISQLLDKVNGRTDEIEMTND------CPVNIYFSS 210
Query: 151 RTHSQISQVI---------SEYKKTAYRVPMAVLASRKHYCTNKYVR----DKENIDEEC 197
RTHSQ++Q S +K R + SRK C N+ V+ + NI++ C
Sbjct: 211 RTHSQLNQFAHQLALTKFQSSFKGVEERTKYLPIGSRKQLCINEKVKSFSKNDSNINDVC 270
Query: 198 KLLLGDRNLGCPQF--KNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSM 255
L + GC QF K+ L ++HDIE++ ++G ++ C YY+ R
Sbjct: 271 VDLQKSKE-GC-QFLPKDYLNSSLTKKLSDLSLSKIHDIEEIADLGSNMKVCPYYSVRKG 328
Query: 256 ADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSV--------DI 307
+ +++ PY +++ R + + I+ +I+++DEAHN+ D SV I
Sbjct: 329 VEMTEIISLPYQILLSESTRAILNLQIEDSIVVIDEAHNLMDTITSMHSVCITIGEMNSI 388
Query: 308 DEDVLLKLQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRK-----ATLAKREFQHFFSC 362
+ + L L+++ S N + LI++ Q ++ +I++ + + +
Sbjct: 389 IKALKFYLGRFLKKLNSGNRIHLMKLIKLCQLVISFIQKSEKCNNIKVGNEINTSDIYQN 448
Query: 363 WTGDKALRELQEANISRQCFPILLECATKAI----KEATDTESELPHLSGMSVITLEGLF 418
TGD + EA +++ +E + + E T S P L + V L+ L
Sbjct: 449 STGDMLNIHILEAFLAKSKIAYKIESYMEKVAENENEQAKTSSSNPLLYKI-VQFLKCLV 507
Query: 419 SSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLS 478
+ S+ G D N ++ L+P+ VFKD+ +
Sbjct: 508 NP-----SKEGKFFWD----------------STNGITSIKYMLLDPSSVFKDIVSKARC 546
Query: 479 IILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDN---YP------ 529
+IL GT+ PM+ F + L P+V D ++ + PDN YP
Sbjct: 547 VILCGGTMEPMSEFKNFL---------FPYVEDKKIKSFSCNHIIPPDNLKVYPVSSQNN 597
Query: 530 ------------------LNASY-----KTADG-------YKLMEKLCNRWRETGQWSRL 559
L AS DG YK M + + W+ T +++
Sbjct: 598 VTLEFSFDNRNNPLMIEALGASIVRICQSVPDGVVVFFPSYKYMNHILSIWKSTDVLTQI 657
Query: 560 NAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENA 619
++K LF EP SQ + +L Y N+I + K A++ + + + +
Sbjct: 658 ESQKKLFEEPTSASQ--VQTILADYANTIKEEKKGAIL------------FSVVGGKMSE 703
Query: 620 NKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYNDTYRSSKNL------LSGNEWYCN 673
A L R ++VG+P+PN ++ K+K+ ++ ++ + +Y N
Sbjct: 704 GINFADELG--RAVVMVGLPYPNAYSGEIIAKRKFIESEAIARGCSMSEAQRNSQSYYEN 761
Query: 674 QAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYD-SFDASLEG 732
RA+NQ+IGR IRH DY I L+D R+Q R + +S W+RK I+ + + D +E
Sbjct: 762 LCMRAVNQSIGRSIRHINDYSIIYLVDCRYQSSRIQNKLSSWVRKRIETRNYNMDQIMEE 821
Query: 733 LKSFF 737
+ FF
Sbjct: 822 TRDFF 826
Score = 58.5 bits (140), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 39/59 (66%), Gaps = 4/59 (6%)
Query: 28 PYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCKLKN 86
PY+PY Q+ M + T+D +G+ L ESPTGTGK+LS++CST+ W ++ K +N
Sbjct: 15 PYKPYDIQIQLMDAIYDTID----NGYKIGLFESPTGTGKTLSIICSTMTWLRDYKREN 69
>gi|340931927|gb|EGS19460.1| hypothetical protein CTHT_0049210 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 918
Score = 157 bits (397), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 174/716 (24%), Positives = 288/716 (40%), Gaps = 136/716 (18%)
Query: 146 IFYASRTHSQISQVISEYKKTAYR---------------------VPMAVLASRKHYCTN 184
I+Y SRTHSQI+Q I E ++ A+ V L+SR+ C N
Sbjct: 220 IYYTSRTHSQIAQFIGELRRPAFPTSIPEDMLSTDNLGKGPPTEPVKQVPLSSRQKLCIN 279
Query: 185 KYVRDKEN---IDEEC-KLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNV 240
V + I++ C +L G CP N ++ + + DIEDL V
Sbjct: 280 PSVARLNSLSAINDRCTELQQGKSGHKCPFIPNADNLKQVHEFRDTVLASLPDIEDLYRV 339
Query: 241 GQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIAR 300
G+ ++ C YYA+R A++V PY ++ R A+ + ++G I+I+DEAHNI D
Sbjct: 340 GKDLQVCPYYASREAIPGAEVVTLPYPLLLQKSAREALGIKLEGNIVIIDEAHNIMDAIA 399
Query: 301 DAGSVDIDEDVLLKLQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFF 360
+ + +I L +L+ E + + L + +V + R +L+ E+ +
Sbjct: 400 NVHAAEIR---LSELRRAREMLGVYVKRFGKKLKGENRMMVAQVGRVVESLS--EWLNTA 454
Query: 361 SCWTGDKALRELQEANISRQCFPILLECATKAIKE---ATDTESELPH-----LSGMS-V 411
GD + + +R I L K I++ A ES + H G
Sbjct: 455 LNGKGDHGIVDSNSLLKARGADQINLYQLIKYIQDSKLAYKVESYVSHKEEEEAQGQGKT 514
Query: 412 ITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKD 471
T + +L F S + ++ ++ +K + S LS L+P F
Sbjct: 515 STTTPVLHTLVSFLSALTNLSTEGRIFYEKLLTTPSDI-------KLSYLLLSPTHAFSS 567
Query: 472 VAELSLSIILTSGTLSPMNSFSSELGVQFG----TCLEAPHVIDVDLQVLTSVISTGP-- 525
+ + ++IL GT+SP + + + L T L HVI + ++ ST P
Sbjct: 568 IVSAARAVILAGGTMSPFDDYKAHLFPMLSEDKITTLSCGHVIPSSNLFVWTLASTRPGQ 627
Query: 526 -------DNYP-------------------LNASYKTADG-------YKLMEKLCNRW-- 550
D + LN DG Y ++++ W
Sbjct: 628 QGSAAASDAFEFSFQKRSDPAMIRQLGLVLLNICSVVPDGVVVFFPSYSYLDEVVAAWQA 687
Query: 551 ------------RETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVR 598
R+ W RL AKK LF E KGGS ++ +L+ Y ++I + +
Sbjct: 688 PETQNGPSVSFQRKQTLWDRLAAKKTLFRESKGGSSDE---ILQQYSDAIFSAGTASRQQ 744
Query: 599 KKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYNDTY 658
R G L+ + + + + L C +VVG+P+PNIN + + +Y +T
Sbjct: 745 LDPTGRGGALLLSVVGGKLSEGINFSDRLGRC--VVVVGLPYPNINSPEWKARIEYVETA 802
Query: 659 --------RSSKNLLSGN---------------------EWYCNQAFRALNQAIGRCIRH 689
++S+ G+ ++Y N RA+NQ+IGR IRH
Sbjct: 803 AIARLTSSKTSRFEGEGDKTQSRALTREEALPLARQVARDFYENACMRAVNQSIGRAIRH 862
Query: 690 RFDYGAIILLDERFQEERNRAHISKWLRKSI---KQYDSFDASLEGLKSFFRDVKG 742
R DY A++L+D RF +R R + W+R+ + + + GL SFFR G
Sbjct: 863 RGDYAAVVLIDRRFGTDRIRGKLPGWIRQGMVEGSENKGLAGLMSGLGSFFRGRSG 918
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 43/75 (57%), Gaps = 11/75 (14%)
Query: 9 PNYRKPLNAYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKS 68
PN + +N +H PY PY QL FM V + L++ G +LESPTGTGKS
Sbjct: 13 PNNNEHINFHH--------PYTPYDVQLQFMRTVYNILEKG---GGQVGILESPTGTGKS 61
Query: 69 LSLLCSTLAWQQNCK 83
LSL+CS L W ++ K
Sbjct: 62 LSLICSALTWLRHHK 76
>gi|67623207|ref|XP_667886.1| helicase [Cryptosporidium hominis TU502]
gi|54659060|gb|EAL37657.1| helicase, belonging to UvrD family [Cryptosporidium hominis]
Length = 1100
Score = 157 bits (396), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 106/336 (31%), Positives = 160/336 (47%), Gaps = 67/336 (19%)
Query: 458 LSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELG---VQFGTCLEAPHVIDVD 513
LS WC + A + + S+I+TSGTLSP+++ + + V F LE HVID +
Sbjct: 525 LSFWCFSAAAALSSLVSAGVRSMIITSGTLSPLDTLAQQFSSSNVTFDVFLENDHVIDSE 584
Query: 514 LQVLTSVISTG--PDNYPLNASY---------------------KTADG-------YKLM 543
Q+ + + G +N L SY + DG Y LM
Sbjct: 585 SQLWAATLERGNSANNTHLIGSYEARNNPSYFSSLGSVVFDCVKRIPDGILLFFGSYSLM 644
Query: 544 EKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEI--VLKHYYNSISQGSKCAVVR--- 598
++ W + G R+ A K +F+EP+ FE+ VL Y + I +G+ +
Sbjct: 645 DQAVKHWTDQGLIERIKAFKSVFIEPRNS----FELGSVLDSYMDCIKKGADSSSQNDGY 700
Query: 599 -KKRVKREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPN 642
K + + G +D + + + G+ +AVCRGK I+ G+PFP+
Sbjct: 701 FKDKKAKSGLSDF--VLKSKRISSSGSLLIAVCRGKVSEGINFSDNACRGVIIAGLPFPS 758
Query: 643 INDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDER 702
I D +V LKK+Y D + + G +WY QA RA+NQAIGR +RHR DYGAIIL D+R
Sbjct: 759 IADARVCLKKQYMDESK-----MDGRQWYNQQAIRAVNQAIGRVVRHRNDYGAIILADKR 813
Query: 703 FQEERNRAHISKWLRKSIKQYDSFDA-SLEGLKSFF 737
F + +SKW+R + K D+ L+ + FF
Sbjct: 814 FNQPNIYTRLSKWIRTNTKHLPQLDSRQLDNISDFF 849
Score = 132 bits (331), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/336 (31%), Positives = 162/336 (48%), Gaps = 59/336 (17%)
Query: 16 NAYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCST 75
N Y + G V FPY Y Q+ +M +++ +L + HALLESPTGTGK+L LL ST
Sbjct: 6 NEYLIEGYSVPFPYDAYKCQINYMQKILYSLKYKK-----HALLESPTGTGKTLCLLAST 60
Query: 76 LAWQQNCKLKNQLANISHSKPDTEAVTDPLAN--GGGFIPESQPSTIPPSTNGQTAQVAM 133
LA+Q++ ISH ++ P+ N G I +S+ +I G V
Sbjct: 61 LAFQKHFL-------ISHG-----SLKKPIENTSSAGVI-KSEGGSI--ELMGVPRTVLE 105
Query: 134 NNKNVKKKM-TPTIFYASRTHSQISQVISEYKKT----AYRVPMAVLASRKHYCTNKYVR 188
N+K K M P I Y+SRTHSQ+SQV+ E K + + + + + K
Sbjct: 106 NSKETKMDMLIPRIIYSSRTHSQLSQVMRELKSSGISDGFTIELFDTDAENKAKIEKSTS 165
Query: 189 DKENIDEECKLL-----LGDRNLGCPQFKNVHKVRG------------------HPSLQK 225
K + + K L LG R+ C K + K RG H +L++
Sbjct: 166 KKRPVIKGGKKLFKATILGSRDQLCVHPK-ISKFRGNALIKNCRKITKEGKCKYHNNLKQ 224
Query: 226 ----GGCHEVHDIEDLVNVGQVVRG---CSYYAARSMADDAQLVFCPYSYIINPVIRGAM 278
G ++ DIEDL N+ C +YA R + +V PY+Y+++ + R +
Sbjct: 225 ANTSGVAADIQDIEDLKNIASSSDSGYFCPFYATREIESVCNVVLLPYNYLLDSITRQNL 284
Query: 279 EVDIKGAILILDEAHNIEDIARDAGSVDI-DEDVLL 313
++D+ +LILDEAHN+E ++ +A S D+ D D+ L
Sbjct: 285 KIDLNNTVLILDEAHNVESVSEEAYSFDLRDIDLAL 320
>gi|326430720|gb|EGD76290.1| hypothetical protein PTSG_00993 [Salpingoeca sp. ATCC 50818]
Length = 871
Score = 157 bits (396), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 161/679 (23%), Positives = 279/679 (41%), Gaps = 130/679 (19%)
Query: 146 IFYASRTHSQISQVISEYKKTAYR-VPMAVLASRKHYCTNKYVRDKEN---IDEECKLLL 201
IF+ SRTHSQ++Q +SE K + + V + L SR++ CTN V + I+E+C L
Sbjct: 240 IFFCSRTHSQLAQFVSEVKNSPFSDVRLTALGSRQNLCTNPRVNKLSSLHAINEKCLDLQ 299
Query: 202 GDRNLGCPQFKNVHKVRGHPSLQKGGCHEV--------HDIEDLVNVGQVVRGCSYYAAR 253
+N P+ KV+ P L + DIE+ VG+ + C+YYA+R
Sbjct: 300 KTKNEIDPKTGKAVKVKKCPMLNPRSMNVTSNIILGSPQDIEEAAVVGERLGACAYYASR 359
Query: 254 SMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLL 313
+ A+LV PY+ +++ R A+ +D+K I+I+DEAHN+ + S + L
Sbjct: 360 QAVEFAELVLLPYNMLLHKPTREAVGLDLKDNIVIVDEAHNLVETIAALHSAKLARLELE 419
Query: 314 KLQMELEQVCS-----VNP---MIYQPLIEMTQDLVGWIERRKATLAKREF--------- 356
+ L Q + P M + L+ + + + ++ + A K EF
Sbjct: 420 QAHAALSQYMDKFKRRLTPKHLMYIRQLLFVLKSWLTFLRKPVADGEKSEFLLSVNDFLF 479
Query: 357 ------QHFFSCWTGDKALRELQEANISRQC-------FPILLECATKAIKEATDTESEL 403
HFF K LR +++ + R+ P + + + E++
Sbjct: 480 ETKTDHMHFF------KLLRYCEKSELHRKLLGYTQRHLPSVFDSGNGDVGESSGALRS- 532
Query: 404 PHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCL 463
H+S + + + SLT+ +G V ++R ++ +L L
Sbjct: 533 KHISPLRGV--QAFIESLTH-ADEDGRIV----------VRRSGRDA------SLQFMLL 573
Query: 464 NPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAP-----HVIDVDLQVLT 518
NPA+ F++V + ++ + GT+ M+ F L L+ HV++ + ++
Sbjct: 574 NPAIYFEEVLLKARAVAVVGGTMGSMSEFVQHLQTPKTRALKVSTFSCGHVVNGN-NIIA 632
Query: 519 SVISTGPDNYPLNASYKTADGYKLMEKLC----------------------------NRW 550
+ GP N P ++ ++E L W
Sbjct: 633 LAATHGPTNEPFRFTFANRKNKAMVEGLGRLLVNVCRVVPAGVVVFFPSYDTEDFIYQHW 692
Query: 551 RETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSK---CAVVRKKRVKREGN 607
+ G L K + EP+ + D L Y N++ QG AVV K EG
Sbjct: 693 KACGVLDSLQRLKQVVREPRAAGKTD--ECLTEYSNAVQQGRGGLLFAVVGGKL--SEGI 748
Query: 608 NDLNTIESQENANKKGASFLAVCRGKIVVGIPFPN-----INDIQVSLKKKYNDTYRSSK 662
N + + R ++VG+P+PN + + L K+ R++
Sbjct: 749 NFKDDL----------------GRCVVMVGLPYPNRHSPALQEKMAYLDKRAGSGARNAN 792
Query: 663 NLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQ 722
G +Y N +A+NQ+IGR IRHR DY AI+L+D+R+ R + + +W++
Sbjct: 793 GQSPGEAYYENLCMKAVNQSIGRAIRHRNDYAAILLVDDRYARPRIASQLPEWMQPYHTT 852
Query: 723 YDSFDASLEGLKSFFRDVK 741
D + L +FFR K
Sbjct: 853 VDKMGGVVRHLSTFFRKRK 871
>gi|167527059|ref|XP_001747862.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773611|gb|EDQ87249.1| predicted protein [Monosiga brevicollis MX1]
Length = 812
Score = 157 bits (396), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 136/561 (24%), Positives = 246/561 (43%), Gaps = 96/561 (17%)
Query: 233 DIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEA 292
D+E+L + + C+YYAAR A+LV PY+ +++ R A + + ++I+DEA
Sbjct: 287 DVEELAAMASREKACAYYAARKAVAPAELVVVPYNMLLHKSTRLASGLQLTNNVVIIDEA 346
Query: 293 HNIEDIARDAGSVDIDEDVLLKLQMELEQVC--------SVNPMIYQPLIEMTQDLVGWI 344
HN+ D + SV + D+LL +L + C + N M + L+ + + +
Sbjct: 347 HNLMDTIANIHSVTVTGDILLGAHRDLLEYCQRYKARLKAKNLMYVKQLLFTLKRWLMAV 406
Query: 345 ERRKATLAKREFQHF-------FSCWTGDKALREL----QEANISRQCFPILLECATKAI 393
++ ++ + + F+ T L +L + + ISR+ LL A +
Sbjct: 407 KKADGLESQTDSERLQPVNEFLFATETDHVNLFKLLTFCERSEISRK----LLGFAERRA 462
Query: 394 KEATD---TESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNP 450
++A +E+ HLS + V+ E LF +L+ S+ L Q +
Sbjct: 463 RQAGQVCGSETGSKHLSPLRVV--ETLFQALS------NSNRDGRVLVKQAH-------- 506
Query: 451 GGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHV- 509
G + LNPAV F+++ + + ++I+ GT+SP+ F +L Q + H
Sbjct: 507 SGLKQSFIRFLLLNPAVYFEEILQSARAVIVAGGTMSPVTDFVEQLTTQATKSVAVHHFA 566
Query: 510 ---IDVDLQVLTSVISTGPDNYPLNASYKTADGYKLM----------------------- 543
+ + V++ + PL ++ T +M
Sbjct: 567 CGHVVPSSHLCPIVLTQTSNRQPLRLTFSTRQSEAMMRELGESLIRVAATVPAGLVVFFP 626
Query: 544 -----EKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKC--AV 596
+KL W G + KP+F EP+ G +D ++VL+ Y +I +G +V
Sbjct: 627 SYEYEQKLVEFWTRQGVLRKFERHKPIFREPRAG--KDVDVVLQQYATAIQKGGAALFSV 684
Query: 597 VRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYND 656
V K EG N + + R ++VG+P+PN++ ++ K +
Sbjct: 685 VGGK--LSEGINFKDDL----------------GRCVVMVGMPYPNLHSKELQEKMAFLR 726
Query: 657 TYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWL 716
+ +S ++ G E+Y N +A+NQ+IGR IRHR D+ A+I+LDER+ R R + W+
Sbjct: 727 SQPASGSVDKGQEYYENLCLKAVNQSIGRAIRHRGDFAAVIMLDERYATPRVRNKLPGWM 786
Query: 717 RKSIKQYDSFDASLEGLKSFF 737
++K + + LK FF
Sbjct: 787 MSNLKVTPTVAQLEDHLKEFF 807
Score = 58.9 bits (141), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 61/123 (49%), Gaps = 24/123 (19%)
Query: 5 ANPNPNYR-KPLNAYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPT 63
P+PN + KPL + FP++PY Q FM R+ T+++ + ESPT
Sbjct: 9 GGPSPNEQPKPL----ATPVDFAFPFEPYSIQRDFMHRLYETIEQG-----GLGIFESPT 59
Query: 64 GTGKSLSLLCSTLAWQQNCK------LKNQLANISHSKPDTEAVTDPLANGGGFIPESQP 117
GTGKSLSLLC L W ++ + L+ QL + +PDT A P N G QP
Sbjct: 60 GTGKSLSLLCGALRWLRDHEQRMHDHLQEQLQS-PDRRPDT-AKAGPSTNSG------QP 111
Query: 118 STI 120
S I
Sbjct: 112 SWI 114
>gi|17507137|ref|NP_493618.1| Protein DOG-1 [Caenorhabditis elegans]
gi|3876642|emb|CAB04262.1| Protein DOG-1 [Caenorhabditis elegans]
Length = 983
Score = 157 bits (396), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 100/334 (29%), Positives = 157/334 (47%), Gaps = 78/334 (23%)
Query: 457 TLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQV 516
T+SLWC++PA+ F D + SI+L SGTL PM++ +ELG++F +E VI+ D +
Sbjct: 661 TISLWCMSPALSFFDAFNETRSIVLASGTLCPMDTLKTELGMEFKQQVEGDQVINKD-NI 719
Query: 517 LTSVISTGPDNYPLNASYK-TAD-----------------------------GYKLMEKL 546
+V+ GP + +Y+ T+D Y+++++L
Sbjct: 720 FAAVLPIGPFGNRIQCTYRNTSDPESSFYCELGAIIKYVCSNVPAGILCFLPSYRVLDQL 779
Query: 547 CNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREG 606
++ KK + EP+ S+ V+ + +I S+
Sbjct: 780 KQCMIRNSTMRQIEMKKVVLYEPRRSSE--LTSVMDQFDAAIFDPSRFG----------- 826
Query: 607 NNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLK 651
AN G+ AV RGK I VGIP+PN D QV+ K
Sbjct: 827 ------------ANINGSLMFAVFRGKVSEGIDFADDRARVVISVGIPYPNAMDDQVNAK 874
Query: 652 KKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEER---- 707
K YND K +L+G+EWY QA+RALNQA+GRC+RH+ D+GA++++DER + +
Sbjct: 875 KLYNDQNSKEKGILTGDEWYTTQAYRALNQALGRCLRHKNDWGAMLMIDERLERQTGNLV 934
Query: 708 ---NRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
+ A +SKW+R +K Y SF + F +
Sbjct: 935 GGASSARVSKWIRAQLKSYPSFKEFNANFREFIQ 968
Score = 136 bits (343), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 104/360 (28%), Positives = 172/360 (47%), Gaps = 68/360 (18%)
Query: 22 GIQVEFP--YQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW- 78
G+ V P Y +Q + + R+++ L +Q + L ESPTG+GK+++LL ST AW
Sbjct: 79 GVPVRVPRGLSLYSTQKLMIVRILTALKNSQ-----NVLGESPTGSGKTMALLASTCAWL 133
Query: 79 ------QQNCKLKNQLANISHSKPD--TEAVTDPLANG---------------------- 108
++ K K ++ S T + PL +
Sbjct: 134 KQYIDEKRESKEKCEIHGFSGKTQVVFTNDIGIPLESKVYEEPPEEEEFIEPVPVKNDKL 193
Query: 109 ------GGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKKMT----PTIFYASRTHSQISQ 158
F P + P PP T + + + V+ K T I+Y +RTH QI+Q
Sbjct: 194 FEAQWEHDFTPHT-PGETPPVTLKEELEPVKKPEPVETKCTCLPRVRIYYGTRTHKQIAQ 252
Query: 159 VISEYKKTAYR--VPMAVLASRKHYCTNKYVRDKENIDEECKLLLGDRNLGC-------P 209
V+ E+ + Y + +LASR+ C N R +I + CK + ++GC P
Sbjct: 253 VVKEFSRLPYAKILKHTILASREQSCINPAARKHADISQYCKEVNSAHSIGCSFKSAMKP 312
Query: 210 QFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVV--RGCSYYAA-RSMADDAQLVFCPY 266
+F+ +R H L++ G V D+E +V + + C Y++ R + DA ++FCP+
Sbjct: 313 RFEKALPLRDH--LERNGT-VVFDMEKIVETLAISYPQLCPYFSTNRILTQDADIIFCPF 369
Query: 267 SYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDE----DVLLKLQMELEQV 322
SY+++P+IR + +V I+ +I+ILDEAHNIED R+A S E D +L L+++ + V
Sbjct: 370 SYLVDPLIRNSSDVQIRNSIVILDEAHNIEDTCREAASFSFTEKELDDSILSLRIKRKAV 429
>gi|32398845|emb|CAD98555.1| similar to helicase-like protein nhl, possible [Cryptosporidium
parvum]
Length = 1100
Score = 156 bits (395), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 106/336 (31%), Positives = 160/336 (47%), Gaps = 67/336 (19%)
Query: 458 LSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELG---VQFGTCLEAPHVIDVD 513
LS WC + A + + S+I+TSGTLSP+++ + + V F LE HVID +
Sbjct: 525 LSFWCFSAAAALSSLVSAGVRSMIITSGTLSPLDTLAQQFSSSNVTFDVFLENDHVIDSE 584
Query: 514 LQVLTSVISTG--PDNYPLNASY---------------------KTADG-------YKLM 543
Q+ + + G +N L SY + DG Y LM
Sbjct: 585 SQLWAATLERGNSTNNTHLIGSYEARNNPSYFSSLGSVVFDCVKRIPDGILLFFGSYSLM 644
Query: 544 EKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEI--VLKHYYNSISQGSKCAVVR--- 598
++ W + G R+ A K +F+EP+ FE+ VL Y + I +G+ +
Sbjct: 645 DQAVKHWTDQGLIERIKAFKSVFIEPRNS----FELGSVLDSYMDCIKKGADSSSQNDGY 700
Query: 599 -KKRVKREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPN 642
K + + G +D + + + G+ +AVCRGK I+ G+PFP+
Sbjct: 701 FKDKKAKSGLSDF--VLKSKRISSSGSLLIAVCRGKVSEGINFSDNACRGVIIAGLPFPS 758
Query: 643 INDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDER 702
I D +V LKK+Y D + + G +WY QA RA+NQAIGR +RHR DYGAIIL D+R
Sbjct: 759 IADARVCLKKQYMDESK-----MDGRQWYNQQAIRAVNQAIGRVVRHRNDYGAIILADKR 813
Query: 703 FQEERNRAHISKWLRKSIKQYDSFDA-SLEGLKSFF 737
F + +SKW+R + K D+ L+ + FF
Sbjct: 814 FNQPNIYTRLSKWIRTNTKHLPQLDSRQLDNISDFF 849
Score = 134 bits (336), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 107/336 (31%), Positives = 162/336 (48%), Gaps = 59/336 (17%)
Query: 16 NAYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCST 75
N Y + G V FPY Y Q+ +M +++ +L + HALLESPTGTGK+L LL ST
Sbjct: 6 NEYLIEGYSVPFPYDAYKCQINYMQKILYSLKYKK-----HALLESPTGTGKTLCLLAST 60
Query: 76 LAWQQNCKLKNQLANISHSKPDTEAVTDPLAN--GGGFIPESQPSTIPPSTNGQTAQVAM 133
LA+Q++ ISH ++ P+ N G I +S+ +I G V
Sbjct: 61 LAFQKHFL-------ISHG-----SLKKPIENTSSAGVI-KSEGGSI--ELMGVPRTVLE 105
Query: 134 NNKNVKKKM-TPTIFYASRTHSQISQVISEYKKT----AYRVPMAVLASRKHYCTNKYVR 188
NNK K M P I Y+SRTHSQ+SQV+ E K + + + + + K
Sbjct: 106 NNKETKMDMLIPRIIYSSRTHSQLSQVMRELKSSGISDGFTIELFDTDAENKAKIEKSTS 165
Query: 189 DKENIDEECKLL-----LGDRNLGCPQFKNVHKVRG------------------HPSLQK 225
K + + K L LG R+ C K + K RG H +L++
Sbjct: 166 KKRPVIKGGKKLFKATILGSRDQLCVHPK-ISKFRGNALIKNCRKITKEGKCKYHNNLKQ 224
Query: 226 ----GGCHEVHDIEDLVNVGQVVRG---CSYYAARSMADDAQLVFCPYSYIINPVIRGAM 278
G ++ DIEDL N+ C +YA R + +V PY+Y+++ + R +
Sbjct: 225 ANTSGVAADIQDIEDLKNIASSSDSGYFCPFYATREIESVCNVVLLPYNYLLDSITRQNL 284
Query: 279 EVDIKGAILILDEAHNIEDIARDAGSVDI-DEDVLL 313
++D+ +LILDEAHN+E ++ +A S D+ D D+ L
Sbjct: 285 KIDLNNTVLILDEAHNVESVSEEAYSFDLRDIDLAL 320
>gi|308485824|ref|XP_003105110.1| CRE-DOG-1 protein [Caenorhabditis remanei]
gi|308257055|gb|EFP01008.1| CRE-DOG-1 protein [Caenorhabditis remanei]
Length = 1008
Score = 156 bits (395), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 104/348 (29%), Positives = 165/348 (47%), Gaps = 70/348 (20%)
Query: 457 TLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQV 516
T+SLWC++PA+ F D + SIIL SGTL PM++ +ELG++F +E VI D +
Sbjct: 683 TISLWCMSPALSFYDAFSETRSIILASGTLCPMDTLKTELGMEFKQQVEGDQVISPD-NI 741
Query: 517 LTSVISTGPDNYPLNASYK-TAD-----------------------------GYKLMEKL 546
+VI GP + +++ T+D Y+++E+L
Sbjct: 742 FAAVIPFGPHGNRITCTFRNTSDPSSPFYEEIASIIKYVCMHVPAGILCFLPSYRVLEQL 801
Query: 547 CNRWRETGQWSRLNAKKPLFVEPKGGSQ-----EDFEIVLKHYYN---SISQGSKCAVVR 598
+ KK + EP+ S+ ++F+ + H N SI+ AV R
Sbjct: 802 KTCMLRNHSMKHIQTKKVVLFEPRKSSELTAVMDEFDSAIFHPTNFGESINGALMFAVFR 861
Query: 599 KKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYNDTY 658
K E + A+ + R I VGIP+PN D QV+ KK YND
Sbjct: 862 GK-----------VSEGIDFADDRA-------RVVISVGIPYPNAMDDQVNAKKSYNDQN 903
Query: 659 RSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNR-------AH 711
+L+G+EWY QA+RALNQA+GRC+RH+ D+GA++L+D+R + + + A
Sbjct: 904 SKDLGILTGDEWYTTQAYRALNQALGRCLRHKNDWGAMLLIDDRLERQTEKIMTGATSAR 963
Query: 712 ISKWLRKSIKQYDSFDASLEGLKSFFRDVKGWVGKKMFNGLENSDNDV 759
+SKW+R +K Y F + + F G++ N ++ D+
Sbjct: 964 VSKWIRAQLKNYRDFKQFNQNFRVFIE------GRQNVNNVKKEKEDI 1005
Score = 132 bits (331), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 161/352 (45%), Gaps = 67/352 (19%)
Query: 15 LNAYHVGGIQVEFP--YQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLL 72
N + + V +P Y +Q + + R+I + ++ + L ESPTG+GK+++LL
Sbjct: 70 FNQLMMQSVPVRYPKGLTLYPTQKLMIVRIIKAIQNSE-----NVLGESPTGSGKTMALL 124
Query: 73 CSTLAW-----------QQNCKL-------------------KNQLANISHSKP------ 96
ST AW ++ C + K ++ KP
Sbjct: 125 SSTCAWLKQYMDQKKESREKCAIHGDGAFGGNMKYEETEDTIKEEMNETRDVKPMVPVKN 184
Query: 97 ----DTEAVTDPLAN---GGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKKMTPTIFYA 149
+ E D +A+ G E +P P + + A ++ I+Y
Sbjct: 185 ENLFEDEWKDDFIAHSIPAAGVKIEEKPDVKPEVKKEPSEKAAQAECTCLPRVR--IYYG 242
Query: 150 SRTHSQISQVISEYKKTAYR--VPMAVLASRKHYCTNKYVRDKENIDEECKLLLGDRNLG 207
+RTH QI+QV+ E+ + Y + +LASR C + R + +I + CK + +G
Sbjct: 243 TRTHKQIAQVVKEFSRLPYANIIKHTILASRDQSCIHPLARKQPDISQFCKEINSANGIG 302
Query: 208 C-------PQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVV--RGCSYYAA-RSMAD 257
C P+F+ +R H L+ G V DIE +V + + C Y++ R +
Sbjct: 303 CSFKSAMRPKFEKAQPLRDH--LRNNGS-VVFDIEQVVETLALSYPQICPYFSTNRVLTQ 359
Query: 258 DAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDE 309
DA L+FCP+SY+++P+IR + +V IK +I+ILDEAHNIED RDA S E
Sbjct: 360 DADLIFCPFSYLVDPLIRNSSDVHIKNSIVILDEAHNIEDTCRDAASFSFTE 411
>gi|72386955|ref|XP_843902.1| helicase [Trypanosoma brucei brucei strain 927/4 GUTat10.1]
gi|62359030|gb|AAX79479.1| helicase, putative [Trypanosoma brucei]
gi|70800434|gb|AAZ10343.1| helicase, putative [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
Length = 963
Score = 156 bits (395), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 112/375 (29%), Positives = 166/375 (44%), Gaps = 96/375 (25%)
Query: 421 LTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWT-HTLSLWCLNPAVVFKDVAELSLSI 479
L++ F R G D +I D KN G+ TLS WCL+ + V + + S+
Sbjct: 389 LSFVFERCGEGDDDSSY----FILTDGKNTNGHANPRTLSYWCLDISRVVQSLVCDLHSL 444
Query: 480 ILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTADG 539
+LTSGTLSP++ F+ ELGV F CL+ HVI+ + QV+ SV+ GP LN Y +G
Sbjct: 445 LLTSGTLSPLSHFAMELGVSFEVCLKGSHVIE-EKQVIGSVLCRGPGGERLNGGYAFRNG 503
Query: 540 ----------------------------YKLMEKLCNRWRETGQ--------WSRLNAKK 563
Y + + WR G W+ L K
Sbjct: 504 VDYRIGLGMALVNISRITPGGILVFFPSYVALNAAVDLWRTGGGRANETETVWAMLEQVK 563
Query: 564 PLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKG 623
P+FVEP + D + ++ + + D N+ +G
Sbjct: 564 PVFVEPAAAA--DAQTIVTSFQREV--------------------DANS--------TRG 593
Query: 624 ASFLAVCRGKI---------------VVGIPFPNINDIQVSLKKKYNDTYRSSKNLL--- 665
A LAVCRG+I + GIPF N D+ V LK++Y + + +
Sbjct: 594 AFLLAVCRGRISEGIDFADQHGRCVVIAGIPFANHTDLFVRLKREYITRVSTKRPAVGGK 653
Query: 666 --SGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAH-ISKWLRKSIKQ 722
+GNEWY N+A R++NQ +GR IRH+ DYGA++L DERF +R H +S+W+
Sbjct: 654 PFTGNEWYMNEAMRSVNQCVGRVIRHKDDYGAVVLADERFV---DRLHGLSEWVGSRCTV 710
Query: 723 YDSFDASLEGLKSFF 737
+ F + + FF
Sbjct: 711 HSEFRGTYACIAKFF 725
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 134/299 (44%), Gaps = 61/299 (20%)
Query: 15 LNAYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCS 74
+++ + G++V FP+ PY Q +M VI L G +ALLESPTGTGK+L
Sbjct: 1 MSSVFIDGVEVSFPFAPYPVQEEYMRSVIYALK-----GSHNALLESPTGTGKTL----- 50
Query: 75 TLAWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMN 134
C L LA + + +
Sbjct: 51 -------CLLCGVLAWLDERR-----------------------------------ICFL 68
Query: 135 NKNVKKKMTPT-IFYASRTHSQISQVISEYKKTAYR--VPMAVLASRKHYCTNKYVRDKE 191
N + + + + Y SRTH+Q+SQVI E+K+T Y MAVL SR H C N V
Sbjct: 69 NSGISDRTSLLRVVYCSRTHAQLSQVIREFKRTRYSSIFSMAVLGSRDHMCLNSQVLQLP 128
Query: 192 NIDEE---CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCS 248
+ + C L DRN +F ++ R +HD+EDLV+ G+ C
Sbjct: 129 SSHAQRKLCSQLREDRNC---RFYRGYEARAAGRKDFPDELWIHDMEDLVSEGRKCGFCP 185
Query: 249 YYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDI 307
YY R A DA +VF PY+Y+ + R + ++ G++LI+DEAHN+ + A +++
Sbjct: 186 YYYERDAAKDADVVFLPYNYVFDVSFRKQLPFELSGSVLIVDEAHNLPSVLGSASCMNL 244
>gi|261327010|emb|CBH09985.1| helicase, putative [Trypanosoma brucei gambiense DAL972]
Length = 963
Score = 156 bits (395), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 112/375 (29%), Positives = 166/375 (44%), Gaps = 96/375 (25%)
Query: 421 LTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWT-HTLSLWCLNPAVVFKDVAELSLSI 479
L++ F R G D +I D KN G+ TLS WCL+ + V + + S+
Sbjct: 389 LSFVFERCGEGDDDSSY----FILTDGKNTNGHANPRTLSYWCLDISRVVQSLVCDLHSL 444
Query: 480 ILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTADG 539
+LTSGTLSP++ F+ ELGV F CL+ HVI+ + QV+ SV+ GP LN Y +G
Sbjct: 445 LLTSGTLSPLSHFAMELGVSFEVCLKGSHVIE-EKQVIGSVLCRGPGGERLNGGYAFRNG 503
Query: 540 ----------------------------YKLMEKLCNRWRETGQ--------WSRLNAKK 563
Y + + WR G W+ L K
Sbjct: 504 VDYRIGLGMALVNISRITPGGILVFFPSYVALNAAVDLWRTGGGRANETETVWAMLEQVK 563
Query: 564 PLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKG 623
P+FVEP + D + ++ + + D N+ +G
Sbjct: 564 PVFVEPAAAA--DAQTIVTSFQREV--------------------DANS--------TRG 593
Query: 624 ASFLAVCRGKI---------------VVGIPFPNINDIQVSLKKKYNDTYRSSKNLL--- 665
A LAVCRG+I + GIPF N D+ V LK++Y + + +
Sbjct: 594 AFLLAVCRGRISEGIDFADQHGRCVVIAGIPFANHTDLFVRLKREYITRVSTKRPAVGGK 653
Query: 666 --SGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAH-ISKWLRKSIKQ 722
+GNEWY N+A R++NQ +GR IRH+ DYGA++L DERF +R H +S+W+
Sbjct: 654 PFTGNEWYMNEAMRSVNQCVGRVIRHKDDYGAVVLADERFV---DRLHGLSEWVGSRCTV 710
Query: 723 YDSFDASLEGLKSFF 737
+ F + + FF
Sbjct: 711 HSEFRGTYACIAKFF 725
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 134/299 (44%), Gaps = 61/299 (20%)
Query: 15 LNAYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCS 74
+++ + G++V FP+ PY Q +M VI L G +ALLESPTGTGK+L
Sbjct: 1 MSSVFIDGVEVSFPFAPYPVQEEYMRSVIYALK-----GSHNALLESPTGTGKTL----- 50
Query: 75 TLAWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMN 134
C L LA + + +
Sbjct: 51 -------CLLCGVLAWLDERR-----------------------------------ICFL 68
Query: 135 NKNVKKKMTPT-IFYASRTHSQISQVISEYKKTAYR--VPMAVLASRKHYCTNKYVRDKE 191
N + + + + Y SRTH+Q+SQVI E+K+T Y MAVL SR H C N V
Sbjct: 69 NSGISDRTSLLRVVYCSRTHAQLSQVIREFKRTRYSSIFSMAVLGSRDHMCLNSQVLQLP 128
Query: 192 NIDEE---CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCS 248
+ + C L DRN +F ++ R +HD+EDLV+ G+ C
Sbjct: 129 SSHAQRKLCSQLREDRNC---RFYRGYEARAAGRKDFPDELWIHDMEDLVSEGRKCGFCP 185
Query: 249 YYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDI 307
YY R A DA +VF PY+Y+ + R + ++ G++LI+DEAHN+ + A +++
Sbjct: 186 YYYERDAAKDADVVFLPYNYVFDVSFRKQLPFELSGSVLIVDEAHNLPSVLGSASCMNL 244
>gi|66475604|ref|XP_627618.1| DNA repair helicase [Cryptosporidium parvum Iowa II]
gi|46229294|gb|EAK90143.1| DNA repair helicase [Cryptosporidium parvum Iowa II]
Length = 1108
Score = 156 bits (394), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 106/336 (31%), Positives = 160/336 (47%), Gaps = 67/336 (19%)
Query: 458 LSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELG---VQFGTCLEAPHVIDVD 513
LS WC + A + + S+I+TSGTLSP+++ + + V F LE HVID +
Sbjct: 533 LSFWCFSAAAALSSLVSAGVRSMIITSGTLSPLDTLAQQFSSSNVTFDVFLENDHVIDSE 592
Query: 514 LQVLTSVISTG--PDNYPLNASY---------------------KTADG-------YKLM 543
Q+ + + G +N L SY + DG Y LM
Sbjct: 593 SQLWAATLERGNSTNNTHLIGSYEARNNPSYFSSLGSVVFDCVKRIPDGILLFFGSYSLM 652
Query: 544 EKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEI--VLKHYYNSISQGSKCAVVR--- 598
++ W + G R+ A K +F+EP+ FE+ VL Y + I +G+ +
Sbjct: 653 DQAVKHWTDQGLIERIKAFKSVFIEPRNS----FELGSVLDSYMDCIKKGADSSSQNDGY 708
Query: 599 -KKRVKREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPN 642
K + + G +D + + + G+ +AVCRGK I+ G+PFP+
Sbjct: 709 FKDKKAKSGLSDF--VLKSKRISSSGSLLIAVCRGKVSEGINFSDNACRGVIIAGLPFPS 766
Query: 643 INDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDER 702
I D +V LKK+Y D + + G +WY QA RA+NQAIGR +RHR DYGAIIL D+R
Sbjct: 767 IADARVCLKKQYMDESK-----MDGRQWYNQQAIRAVNQAIGRVVRHRNDYGAIILADKR 821
Query: 703 FQEERNRAHISKWLRKSIKQYDSFDA-SLEGLKSFF 737
F + +SKW+R + K D+ L+ + FF
Sbjct: 822 FNQPNIYTRLSKWIRTNTKHLPQLDSRQLDNISDFF 857
Score = 134 bits (336), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 107/336 (31%), Positives = 162/336 (48%), Gaps = 59/336 (17%)
Query: 16 NAYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCST 75
N Y + G V FPY Y Q+ +M +++ +L + HALLESPTGTGK+L LL ST
Sbjct: 14 NEYLIEGYSVPFPYDAYKCQINYMQKILYSLKYKK-----HALLESPTGTGKTLCLLAST 68
Query: 76 LAWQQNCKLKNQLANISHSKPDTEAVTDPLAN--GGGFIPESQPSTIPPSTNGQTAQVAM 133
LA+Q++ ISH ++ P+ N G I +S+ +I G V
Sbjct: 69 LAFQKHFL-------ISHG-----SLKKPIENTSSAGVI-KSEGGSI--ELMGVPRTVLE 113
Query: 134 NNKNVKKKM-TPTIFYASRTHSQISQVISEYKKT----AYRVPMAVLASRKHYCTNKYVR 188
NNK K M P I Y+SRTHSQ+SQV+ E K + + + + + K
Sbjct: 114 NNKETKMDMLIPRIIYSSRTHSQLSQVMRELKSSGISDGFTIELFDTDAENKAKIEKSTS 173
Query: 189 DKENIDEECKLL-----LGDRNLGCPQFKNVHKVRG------------------HPSLQK 225
K + + K L LG R+ C K + K RG H +L++
Sbjct: 174 KKRPVIKGGKKLFKATILGSRDQLCVHPK-ISKFRGNALIKNCRKITKEGKCKYHNNLKQ 232
Query: 226 ----GGCHEVHDIEDLVNVGQVVRG---CSYYAARSMADDAQLVFCPYSYIINPVIRGAM 278
G ++ DIEDL N+ C +YA R + +V PY+Y+++ + R +
Sbjct: 233 ANTSGVAADIQDIEDLKNIASSSDSGYFCPFYATREIESVCNVVLLPYNYLLDSITRQNL 292
Query: 279 EVDIKGAILILDEAHNIEDIARDAGSVDI-DEDVLL 313
++D+ +LILDEAHN+E ++ +A S D+ D D+ L
Sbjct: 293 KIDLNNTVLILDEAHNVESVSEEAYSFDLRDIDLAL 328
>gi|407929782|gb|EKG22592.1| Helicase-like DEXD box c2 type [Macrophomina phaseolina MS6]
Length = 816
Score = 156 bits (394), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 166/722 (22%), Positives = 284/722 (39%), Gaps = 178/722 (24%)
Query: 146 IFYASRTHSQISQVISEYKKTAYRVPMAV----------------------------LAS 177
+FY SRTHSQ+SQ E ++ ++P A+ L S
Sbjct: 139 VFYCSRTHSQLSQFAGELRRV--KMPPAISSSDGQQMRSGQQDDAHTEITENFKHLTLGS 196
Query: 178 RKHYCTNKYVRDKEN---IDEECKLL-----LGDRNLGCPQFKN------VHKVRGHPSL 223
RK+ C N V+ + ++E+C L DR CP V+ R H
Sbjct: 197 RKNLCINPKVQKLGSAPLVNEKCLDLQKPGTAADRK--CPYLPTKETEPIVNDFRDH--- 251
Query: 224 QKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIK 283
++ DIEDL +G+ + C YYA+R+ +++V PY ++ R A+++++K
Sbjct: 252 ---ALADIRDIEDLGKIGKKLGVCPYYASRAAVKPSEIVTLPYPLLLQKTAREALDINMK 308
Query: 284 GAILILDEAHNIEDIARDAGSVDIDEDVLLK--------LQMELEQVCSVNPMIYQPLIE 335
G ++I+DEAHN+ D SV + LL+ LQ ++ N + +
Sbjct: 309 GHVVIIDEAHNLMDAITGIYSVSVSLSQLLRSRGQLTTYLQRFRNRLKGKNRVYLAQTVR 368
Query: 336 MTQDLVGWIERRKATLAKRE-FQHFFSCWTGD--------KALRELQEANISRQCFPILL 386
+ L+ +++ + + E G K LR L E+ ++R+ +L
Sbjct: 369 LVDSLIRYLQSIDSNTGEEEGIVQIGDLMAGKGVDQINLYKLLRYLDESRLARKVDGYVL 428
Query: 387 ECATK-AIKEATDTESELPHLSGMSVITLEGLFSSLT-------YFFSRNGSHVSDYQLA 438
+ IK++T S P + ++ ++ F +L +F+++N D +L
Sbjct: 429 HTEEQEKIKQSTSAMSGEPRSTMPVLMHIQSFFYALLNPSVEGRFFYAKN-----DEELG 483
Query: 439 LQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGV 498
L L L+P F+D+ E + ++IL GT+SPM+ +S L
Sbjct: 484 L-----------------CLKYMLLDPTHHFRDIVEDARAVILAGGTMSPMSDYSEHLLS 526
Query: 499 QFG----TCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYK------------------- 535
+ HVI +L ++TGP P + +++
Sbjct: 527 YLPPSRIVTVSCGHVIPPS-NLLAWPVTTGPSGAPFDFTFEKRNTEATILDLGSALLSFI 585
Query: 536 --TADG-------YKLMEKLCNRW------RETGQ---WSRLNAKKPLFVEPKGGSQEDF 577
DG Y +++ W R +G + L KP+F E K
Sbjct: 586 SSIPDGVVVFFPSYAYLDRCMEAWQRLPSPRASGAKTLYDALRLVKPIFHESK------- 638
Query: 578 EIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQ-ENANKKGASFLAVCRGKIVV 636
N ++ K +++ ++ L+ + N +GA LAV G +
Sbjct: 639 --------NKATRMEKTKTAPPEQINVTTDSVLSAYSTAVATGNGRGALLLAVIGGSLSE 690
Query: 637 GI---------------PFPNINDIQVSLKKKYNDTYRSSK------NLLSGNEWYCNQA 675
GI PFPN + + K Y K + E+Y N
Sbjct: 691 GINFSDGLGRGVVVVGLPFPNPHSAEWKAKLAYISRKAVEKGGSGDAGKAAAREFYENAC 750
Query: 676 FRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKS 735
RA+NQ +GR IRHR DY +I+L+D R++ +R + W+R S+++ D GL
Sbjct: 751 MRAVNQCVGRAIRHRNDYASILLVDRRYESDRIKVKFPGWIRGSLRKGDGIQVVKRGLVE 810
Query: 736 FF 737
FF
Sbjct: 811 FF 812
>gi|406865719|gb|EKD18760.1| putative ATP-dependent RNA helicase chl1 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 894
Score = 155 bits (392), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 174/725 (24%), Positives = 289/725 (39%), Gaps = 172/725 (23%)
Query: 146 IFYASRTHSQISQVISEYKKTAY---------------RVPMAVLASRKHYCTNKYVRDK 190
IFY SRTHSQ++Q I+E ++ + + L SRK+ C N V +K
Sbjct: 205 IFYCSRTHSQLTQFINELRRVNFPPSIKDENIKPSDIEDLKHLTLGSRKNLCINPKV-NK 263
Query: 191 EN----IDEECKLLLGD---RNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQV 243
N ++E C L + C N + + + DIED+ ++G+
Sbjct: 264 LNSLTAVNERCAELQQTSTPKEHKCVFLPNKENQTLVNTFRDRSLATIRDIEDMGDLGKQ 323
Query: 244 VRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAG 303
+ C YYA+RS A++V PY ++ R A+ + +KG ++I+DEAHN+ D
Sbjct: 324 IGICPYYASRSAIRPAEIVTLPYPLLLQKSAREALGISLKGHVVIIDEAHNLMDAISGIH 383
Query: 304 SVDIDEDVLLK--------LQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLA--- 352
V++ L + LQ ++ N + ++ + L G++E R A
Sbjct: 384 GVEVSLRQLKRGRAQLGVYLQKFRNRLKGKNRVYIAQVVRVIDSLTGYLESRLALHVSET 443
Query: 353 ------KREFQHFFSCWTGDKAL---------------RELQEANISRQC--FPILLECA 389
+ + + DK L LQE+ ++R+ + + E
Sbjct: 444 PLYLSFRADLEEKSDGIVSDKELLSGKGVDQINLFKLVHYLQESKLARKVESYALYTETD 503
Query: 390 TKAIKEATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKN 449
T + ++ P L +S + L +LT+ S+ G Y L S N
Sbjct: 504 TSTTAKTSEQSKSTPVLHQISSLLL-----ALTH-PSKEGRLF--YAL---------SPN 546
Query: 450 PGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSEL-------GVQFGT 502
P L L+PA F+ + + ++IL GT+SPM+ ++S L G+ T
Sbjct: 547 PASPDLINLKFLLLDPAPHFQAIVSEARAVILAGGTMSPMSDYTSHLFPYLPPAGI---T 603
Query: 503 CLEAPHVIDVDLQVLTSVISTGPDNYPLNASYK---------------------TADG-- 539
L HVI + +L +S GP + ++K DG
Sbjct: 604 TLSCGHVIPKE-NLLAWNLSRGPTGQEFDFTFKNRGNNDMIDDLGRALLNICTVVPDGVV 662
Query: 540 -----YKLMEKLCNRWRET-GQ-----WSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSI 588
Y + + +RW GQ RL KK LF E K ++ + VL Y +I
Sbjct: 663 VFFPSYSYLSSIVSRWEVIPGQDQKSLLQRLEGKKVLFKESK---EQSVDTVLNEYAKAI 719
Query: 589 SQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQV 648
G G L+ + + + + L C ++VG+PFPNIN +
Sbjct: 720 DTG-------------RGGLLLSVVGGKMSEGINFSDSLGRC--VVIVGLPFPNINSAEW 764
Query: 649 SLKKKYNDT---YRSSKNLLSGN-----------------------------EWYCNQAF 676
K +Y ++ R L+G+ E+Y N
Sbjct: 765 RAKIQYIESSIVERLEAEGLAGSGCTSTNQHIDGKLKLSKEEMITRGKGEAREFYENACM 824
Query: 677 RALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYD---SFDASLEGL 733
RA+NQ++GR IRHR DY AI+++D+RF+ ++ R + W+R+ + + F + L
Sbjct: 825 RAVNQSVGRAIRHRGDYAAIVMIDKRFEGQKIRGKLPGWIREGLVEGSGGKGFGVLMSAL 884
Query: 734 KSFFR 738
FFR
Sbjct: 885 GGFFR 889
Score = 50.4 bits (119), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 32/56 (57%), Gaps = 5/56 (8%)
Query: 28 PYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCK 83
P+ PY Q FM V L+ + +LESPTGTGKSLSL+C L W ++ K
Sbjct: 21 PFTPYTIQETFMETVYQVLENGKV-----GILESPTGTGKSLSLICGALTWLRDHK 71
>gi|403335726|gb|EJY67043.1| Regulator of telomere elongation helicase 1 [Oxytricha trifallax]
Length = 1454
Score = 155 bits (391), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 120/435 (27%), Positives = 179/435 (41%), Gaps = 86/435 (19%)
Query: 351 LAKREFQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMS 410
L +R F H+ + +K L EL E R C + K I+ P S S
Sbjct: 435 LTERNFNHW--RYIFEKVLSELSERQNGRPCLERWWDALKKVIRLYEMIYD--PQKSMSS 490
Query: 411 VITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFK 470
+ + + ++F D + ++ K +L WC NP + F+
Sbjct: 491 DRECQTMRDEINHYFVY--LRQEDVEFDKKRIYSEQEKENRIRTARSLGFWCFNPGLGFQ 548
Query: 471 DVAELS-LSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYP 529
+ L+ S+ILTSGTL PM+SF EL + F +E HVI + Q S+++ G +
Sbjct: 549 KIVNLNPRSLILTSGTLYPMSSFQKELMMDFPIKIENKHVISKE-QASISILTNGVKGHE 607
Query: 530 LNASYKTADG----------------------------YKLMEKLCNRWRETGQWSRLNA 561
N ++K + Y+++ KL W +G RL
Sbjct: 608 FNFAHKFRENEDQLDDLGETLLRITEVTPGGILIFFPSYQMLHKLYELWEHSGLIKRLER 667
Query: 562 KKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANK 621
K + EP+ S ++ V+ +Y S+
Sbjct: 668 IKTVLQEPRDSSH--YKYVITSFYQSVY-------------------------------T 694
Query: 622 KGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLS 666
KGA AVCRGK I++GIP+P D + LKK Y D R+ L+
Sbjct: 695 KGAIIFAVCRGKISEGLDFSDDAARCVIIIGIPYPMTLDPKTILKKHYLDKTRNDG--LT 752
Query: 667 GNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSF 726
G+ WY QA RA NQAIGR IRH DYG IIL+D+RF R I+ WLR S+ +
Sbjct: 753 GHTWYQQQATRATNQAIGRVIRHVQDYGNIILIDKRFDNHTQRKQITNWLRDSVVVFQDA 812
Query: 727 DASLEGLKSFFRDVK 741
+++ FF ++K
Sbjct: 813 KKAIDKYLDFFVEMK 827
Score = 129 bits (323), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/273 (32%), Positives = 126/273 (46%), Gaps = 60/273 (21%)
Query: 40 CRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCKLKNQLANISHSKPDTE 99
R + +D+A + G +ALLESPTGTGK+L LL + LAW + + N+
Sbjct: 114 LRYLKHIDQACKRG-LNALLESPTGTGKTLCLLTAGLAWLKKIRESNE------------ 160
Query: 100 AVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKKMTPTIFYASRTHSQISQV 159
V +K P I Y SRTHSQISQV
Sbjct: 161 --------------------------------------VDEKDLPKIIYCSRTHSQISQV 182
Query: 160 ISEYKKTAYRVPMAVLASRKHYCTNKYVRDKE--NIDEECKLLLGDRNLG---CPQFKNV 214
++E K TAY+ + ++ SR C N V + +++ CK + R C FKN
Sbjct: 183 MNELKHTAYKPKVCLIGSRDQLCVNPMVNTHKGMSLNSLCKKVREQRKDSPNCCSFFKNT 242
Query: 215 HKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVI 274
G G + D+EDL +G C YY +S A L+ PY+Y+I+P I
Sbjct: 243 ----GDSVTPNGFEWGIQDVEDLHKLGTKNIVCPYYLQKSRIKYADLILMPYNYLIDPKI 298
Query: 275 RGAMEVDIKGAILILDEAHNIEDIARDAGSVDI 307
R +VD + +I+I+DEAHN+E +A D S +I
Sbjct: 299 RENFKVDYENSIIIMDEAHNVERVAEDVASFEI 331
>gi|392591953|gb|EIW81280.1| DNA repair helicase [Coniophora puteana RWD-64-598 SS2]
Length = 867
Score = 155 bits (391), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 171/738 (23%), Positives = 294/738 (39%), Gaps = 177/738 (23%)
Query: 131 VAMNNKNVKKKMTP--------TIFYASRTHSQISQVISEYKKTAYR---VP-------- 171
VAM K K TP I+YASRTHSQ++Q++ E +K ++ +P
Sbjct: 177 VAM--KGAGSKTTPEEQEPSCTKIYYASRTHSQLTQILPELRKLKFKLTSIPDTEPSHHG 234
Query: 172 ---------------------------MAVLASRKHYCTNKYVRDKE-NIDEECKLLLGD 203
A L SRK C N V+ K ++DE+C+ LL +
Sbjct: 235 NQKEVSLKRRQEQAESDDDEGPSTPWRTASLGSRKQLCINDEVKAKHGDLDEKCRELLEE 294
Query: 204 RNLG----CPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDA 259
+ P + H++ L+ DI +L G+ C YY +R A
Sbjct: 295 KGKKRCQYLPPLEEEHRL---ADLRDQILASPKDIVELAAAGRNSHICPYYGSRKAVPQA 351
Query: 260 QLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMEL 319
+LV PY+ ++ R A+ +D+ G ++I+DEAH ++ S+ L L
Sbjct: 352 ELVTLPYNLLLLKSAREALGIDLTGQVVIIDEAH---NLIPTLLSISSSSLSFGTLSAAL 408
Query: 320 EQVC-----------SVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFS-----CW 363
QV + + + L+E L +++ + A+ K Q + C
Sbjct: 409 SQVTVYYKRFRNRFSPTHALHLKRLVEFMSSLQRFLKEKAAS--KPSTQEAMTVPDLGCA 466
Query: 364 TGDKA-----LRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVITLEGLF 418
G K L ++ S+ + C +AI+++ + G L +
Sbjct: 467 LGHKVEGINLLEIVEYLKTSKVARKVSGYCEKEAIRKSEQESQHRTYTRGKGNPPLHAIE 526
Query: 419 SSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLS 478
S F + + D +L L + R+S + L LNPA +F+DV +++ S
Sbjct: 527 S----FITGISAASEDGRLILS--LGRESDASDSEIKYQL----LNPATIFRDVVDVARS 576
Query: 479 IILTSGTLSPMNSFSSELGVQFG----TCLEAPHVIDVDLQVLTSVISTGPDNYPLNASY 534
++L GT+SP++ +++L + H++ V ++ GP L+ S+
Sbjct: 577 VVLAGGTMSPISDVTNQLFPYLSDASLSTFSCGHIVPQS-HVQALLVGKGPSGRTLDFSF 635
Query: 535 KTADGYKLMEKLCNR----------------------------WRETGQWSRLNAKKPLF 566
+L+ +L W +G W +L KK LF
Sbjct: 636 GNQKDKQLVNELGRTIANFVNLVPGGMVVFFPSYTYLYFAKEMWGTSGIWDQLARKKQLF 695
Query: 567 VEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASF 626
+EP+ + E +L+ Y S A+ +Q + KGA
Sbjct: 696 IEPREAT--GVESLLRAY-------SAAAI------------------TQPDDGTKGALL 728
Query: 627 LAVCRGKI---------------VVGIPFPNINDIQV--------SLKKKYNDTYRSSKN 663
AV GK+ VVG+PF N I++ L+ K ++ + +KN
Sbjct: 729 FAVVGGKVSEGLNFSDDMARAVMVVGLPFANKASIELQERLRYVKELESKISNKHLGAKN 788
Query: 664 LLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQY 723
+ +E Y N A+NQ+IGR IRH+ D+ A+IL+D RF + + +W+ I
Sbjct: 789 --TASELYVNMCMSAVNQSIGRAIRHKMDWAALILVDHRFGTASIQGKLPQWIGAGIVPC 846
Query: 724 DSFDASLEGLKSFFRDVK 741
D+F ++++ L F+R+ K
Sbjct: 847 DTFGSAVKQLSVFYRNKK 864
Score = 48.1 bits (113), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 33/53 (62%), Gaps = 6/53 (11%)
Query: 27 FPYQP-YGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
FPY P Y Q M V ++++ G ++ESPTGTGK+LSLLCS+L W
Sbjct: 14 FPYDPPYSIQTDLMRHVYASIE-----GRKVTIVESPTGTGKTLSLLCSSLTW 61
>gi|341901524|gb|EGT57459.1| CBN-DOG-1 protein [Caenorhabditis brenneri]
Length = 987
Score = 154 bits (390), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 107/384 (27%), Positives = 174/384 (45%), Gaps = 81/384 (21%)
Query: 426 SRNGSHVSDYQLALQKYIKRDSKNPGGNWTHT-----------------LSLWCLNPAVV 468
+RN + + Q + ++++N G W T +SLWC++PA+
Sbjct: 617 TRNSAGPRNMQYKEENAWVQEAENDGDEWIDTDSSPTGHKAIFEGCKTSVSLWCMSPALS 676
Query: 469 FKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNY 528
F D + SIIL SGTL PM++ +ELG++F +E VI D + +V+ GP
Sbjct: 677 FFDAFSETRSIILASGTLCPMDTLKTELGMEFKQQVEGDQVISPD-NIFAAVLPIGPHGN 735
Query: 529 PLNASYK-TAD-----------------------------GYKLMEKLCNRWRETGQWSR 558
+ +++ T+D Y+++E+L +
Sbjct: 736 RVQCTFRNTSDPDSPFYSEVGSIIKYVCSNVPAGILCFLPSYRVLEQLKTCMTRNLSMKK 795
Query: 559 LNAKKPLFVEPKGGSQ-----EDFEIVL---KHYYNSISQGSKCAVVRKKRVKREGNNDL 610
+ KK + EP+ S+ + F+ + K++ +I+ AV R K
Sbjct: 796 IETKKVVLFEPRRSSELSNVMDQFDAAIFNPKNFGPTINGALMFAVFRGK---------- 845
Query: 611 NTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSGNEW 670
E + A+ + R I VGIP+PN D QV+ KK YND +L+G+EW
Sbjct: 846 -VSEGIDFADDRA-------RVVISVGIPYPNAMDDQVNAKKSYNDMNSKEMGILTGDEW 897
Query: 671 YCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNR-------AHISKWLRKSIKQY 723
Y QA+RALNQA+GRC+RH+ D+GA++++DER + + A +SKW+R +K Y
Sbjct: 898 YTTQAYRALNQALGRCLRHKNDWGAMLMIDERLERQTGNLQSGAVSARVSKWIRAQLKSY 957
Query: 724 DSFDASLEGLKSFFRDVKGWVGKK 747
SF + F V K+
Sbjct: 958 PSFKTFNASFREFIERQHAVVKKE 981
Score = 138 bits (347), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 104/365 (28%), Positives = 166/365 (45%), Gaps = 85/365 (23%)
Query: 23 IQVEFP--YQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW-- 78
+ V FP Y +Q + + R+++ L +Q + L ESPTG+GK+++LL ST AW
Sbjct: 83 VPVRFPQGMSLYPTQKLMIVRILAALKNSQ-----NVLGESPTGSGKTMALLSSTCAWLK 137
Query: 79 ---------QQNCKLKNQLANISHSKPDTEAV----------TDPLANGG---------- 109
++ C + + + + P+
Sbjct: 138 QYIDEKRESKEKCAVHGNFMRHEDDEDSKDGIKKEEDLAKEDIKPVIGAAPKKKEDLFEE 197
Query: 110 ----GFIPESQPSTIPPSTNGQTAQVAMNNKNVKKKMTPT----------------IFYA 149
FIP S PP+ +V N VKK+ P I+Y
Sbjct: 198 QWNDDFIPHS-----PPTAAIVKQEV---NAEVKKEAKPEPVEQKTSECTCLPRVRIYYG 249
Query: 150 SRTHSQISQVISEYKKTAYR--VPMAVLASRKHYCTNKYVRDKENIDEECKLLLGDRNLG 207
+RTH QI+QV+ E+ + Y + +LASR+ C + R + +I + CK + +G
Sbjct: 250 TRTHKQIAQVVKEFSRLPYANIIKHTILASREQSCIHPTARKQPDISQYCKEINSANGIG 309
Query: 208 C-------PQFKNVHKVRGHPSLQKGGCHEVHDIEDLVN--VGQVVRGCSYYAA-RSMAD 257
C P+F+ +R H LQ G V DI+++V + C Y++ R +
Sbjct: 310 CTFKTNMRPRFEKAAPMRDH--LQNNGT-VVFDIDEVVETLATSYPQLCPYFSTNRILTQ 366
Query: 258 DAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDE----DVLL 313
DA L+FCP+SY+++P+IR + +V IK +++ILDEAHNIED RDA S E D LL
Sbjct: 367 DADLIFCPFSYLVDPLIRNSSDVTIKNSVVILDEAHNIEDTCRDAASFTFTEKEFDDSLL 426
Query: 314 KLQME 318
+++
Sbjct: 427 SFRLK 431
>gi|328776825|ref|XP_394659.4| PREDICTED: Fanconi anemia group J protein homolog isoform 1 [Apis
mellifera]
Length = 305
Score = 154 bits (389), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 105/324 (32%), Positives = 152/324 (46%), Gaps = 73/324 (22%)
Query: 463 LNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVIS 522
+NP V F +A + IIL SGTL+P SF SELG F L HVI + QV + I
Sbjct: 1 MNPGVAFSPLALNARCIILASGTLTPTTSFQSELGTSFTHVLNTGHVIPKE-QVYATCIP 59
Query: 523 TGPDNYPLNASYKTADGYKLMEKL----------------------------CNRWRETG 554
GP+ L A+Y+ + ++ ++L RW++
Sbjct: 60 KGPNGILLKANYQIVNTWQFQDELGQVLLDVCESIPHGILCFFSSYNVMNIQMERWKQNS 119
Query: 555 QWSRLNAKKPLFVEPK-GGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTI 613
WS++ + K +F+EP+ GG D ++ Y I S+ K R+
Sbjct: 120 IWSKITSVKTVFIEPRHGGGLTD---IMNEYREVIEYTSE----PKGRIT---------- 162
Query: 614 ESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKKYNDTY 658
GA FLAV RGK I VGIP+ D + +K YND
Sbjct: 163 ---------GALFLAVFRGKVAEGIDFRDNEARCVITVGIPYAVRKDPVIDMKMTYNDM- 212
Query: 659 RSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRK 718
SK LL G+EWY QA+RALNQA+GRC+RH D+GA++L+DERF +N+ ++ KW++
Sbjct: 213 NVSKGLLRGSEWYSIQAYRALNQALGRCLRHIHDWGAVLLVDERFLVPQNKENLPKWVKS 272
Query: 719 SIKQYDSFDASLEGLKSFFRDVKG 742
+ + +D LK+F K
Sbjct: 273 MWIKQNEYDLK-RNLKNFVEKQKA 295
>gi|390361889|ref|XP_003730027.1| PREDICTED: regulator of telomere elongation helicase 1-like
[Strongylocentrotus purpuratus]
Length = 466
Score = 154 bits (389), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 95/287 (33%), Positives = 148/287 (51%), Gaps = 14/287 (4%)
Query: 22 GIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQN 81
G+QVEFP++PY Q +M +VI L ++ + +LESPTGTGK+L LLCSTLAW+
Sbjct: 8 GVQVEFPFEPYPCQKDYMRKVIQCLQMSK-----NGVLESPTGTGKTLCLLCSTLAWRHT 62
Query: 82 CKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKK 141
+ +L A G + Q T + +G + + + +
Sbjct: 63 YIAQQELGKCLKGSNGGGDGAGAGAGAGAGAYKEQLMTDLKAASGW-GEGSEEGLFIDR- 120
Query: 142 MTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEECKLLL 201
P I YASRTHSQ+SQ + + K T YR + VL SR+ C + V E+ + +
Sbjct: 121 --PKIIYASRTHSQLSQALDQLKDTIYRPKVCVLGSREQMCVHPEVVKVESNSAKVHMCR 178
Query: 202 GDRNLGCPQFKN-VHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQ 260
N F N + +G + +G + DIEDLV +G + C YY AR + A
Sbjct: 179 AKVNAKMCHFHNNLDNKKGEKAFSEG----ILDIEDLVKLGNAHKVCPYYMARELKTSAD 234
Query: 261 LVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDI 307
++F PY+Y+++P R ++++G I+I DEAHN+E + ++ S D+
Sbjct: 235 IIFMPYNYLLDPKSRRIHGIELQGNIIIFDEAHNVERMCEESASFDL 281
>gi|367007804|ref|XP_003688631.1| hypothetical protein TPHA_0P00390 [Tetrapisispora phaffii CBS 4417]
gi|357526941|emb|CCE66197.1| hypothetical protein TPHA_0P00390 [Tetrapisispora phaffii CBS 4417]
Length = 825
Score = 153 bits (387), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 162/662 (24%), Positives = 276/662 (41%), Gaps = 121/662 (18%)
Query: 146 IFYASRTHSQISQVISEYKKTAY------------RVPMAVLASRKHYCTNKYVRDK--- 190
I++ASRTHSQ++Q S+ K + R+ + SR C N +R K
Sbjct: 215 IYFASRTHSQLNQFASQLKLPDFKPSFDPEIVPKERIKYTPMGSRLQLCVNPDIRKKWKT 274
Query: 191 -ENIDEECKLLLGDRNLGCPQFK-NVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCS 248
E+I+ CK L+G GCP K + K+ + +VHDIED+V++G+ + C
Sbjct: 275 LESINNACKELVGSEK-GCPYHKRKISKI----DFRDQMFTKVHDIEDIVDIGETLNMCP 329
Query: 249 YYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDID 308
YY R D++++ PY Y+++ R +M +D+K +I+++DEAHN+ D S I
Sbjct: 330 YYGTREYLMDSEIITLPYQYLLSESTRISMGIDLKNSIVVIDEAHNLIDTVNSIHSAQIS 389
Query: 309 EDVLL-----------KLQMELEQVCSVNPMIYQPLIEMTQDLVGWIERR-KATLAKREF 356
L+ K Q L VN + LI++ L +I++ K K
Sbjct: 390 LQELIMSQKGLTLYLKKFQKRLNGGNRVNIL---KLIKLFSILNEFIKKTYKKAGQKINV 446
Query: 357 QHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVITLEG 416
FS D I+ ++ + A K T +S P +
Sbjct: 447 NDIFSGSNAD---------TINIHKLNKFIQVSKIAYKIDTYIDSISPEKDEKVEPSSTP 497
Query: 417 LFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELS 476
L + F + + ++ Q +K +T+ L P+ FK + +
Sbjct: 498 LLYKVATFLNCLTNQSNEGQFFFEK-------------DNTIRYMLLEPSESFKSIINDA 544
Query: 477 LSIILTSGTLSPMNSFSSEL--------GVQFGTCLEAP------HVIDVDLQVLT---- 518
+IL GT+ P++ F L V F P ++ID T
Sbjct: 545 RCVILAGGTMEPVSDFFDVLFPSVDKIDTVTFSCNHVIPDENLSTYIIDEPQFEFTFEKR 604
Query: 519 ---SVISTGPDNY--PLNASYKTADG-------YKLMEKLCNRWRETGQWSRLNAKKPLF 566
++++ N+ L+ S + G Y+ ++ + + W+E+G + +LN + +
Sbjct: 605 QDKNLVNGALFNFLNDLSNSVPPSGGIVTFFPSYQYLQYIIDTWKESGMFDKLNNSRKIL 664
Query: 567 VEPKGGSQEDFEIVLKHYYNSISQG---SKCAVVRKKRVKREGNNDLNTIESQENANKKG 623
E K G Y N+IS+G + AVV K EG I Q+N
Sbjct: 665 FESKAGKDP-----FPEYMNNISEGISSNLFAVVGGKL--SEG------INFQDN----- 706
Query: 624 ASFLAVCRGKIVVGIPFPNINDIQVSLKKKY------NDTYRSSKNLLSGNEWYCNQAFR 677
+CR ++VG+P+PNI ++ +K+ + + S + +Y +
Sbjct: 707 -----LCRAIVMVGLPYPNIFSGELQIKRSHLEDKIIKNGGSKSDAMKKTRTYYDVLCMK 761
Query: 678 ALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFF 737
++NQ+IGR IRH DY I LLD+R++ +S W+R I+Q L K++F
Sbjct: 762 SVNQSIGRAIRHINDYANIYLLDKRYKLPNIEDKLSLWVRNRIQQESKVSGILTKTKNYF 821
Query: 738 RD 739
+
Sbjct: 822 EN 823
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 39/62 (62%), Gaps = 4/62 (6%)
Query: 22 GIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQN 81
G PYQPY Q+ M + TL + ++ A+LESPTGTGK+LSL+CS ++W ++
Sbjct: 4 GANFGHPYQPYDIQIQLMQCIYDTLTQNKK----LAILESPTGTGKTLSLICSIVSWLRD 59
Query: 82 CK 83
K
Sbjct: 60 NK 61
>gi|300120242|emb|CBK19796.2| unnamed protein product [Blastocystis hominis]
Length = 759
Score = 153 bits (387), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 156/649 (24%), Positives = 273/649 (42%), Gaps = 104/649 (16%)
Query: 142 MTPTIFYASRTHSQISQVISEYKKTAYR--VPMAVLASRKHYCTNKYVR---DKENIDEE 196
++P I+Y SRTHSQ+SQV E+ +A+ V + + R+ +C + V+ + +E
Sbjct: 157 LSPQIYYCSRTHSQLSQVFQEFLHSAWAEDVQCSCIGGRRSFCIHPTVKRLPTDAQMSDE 216
Query: 197 CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMA 256
C L +R+ G + H S++ +IEDLV + +GC YYA+R
Sbjct: 217 CLFLQRNRSRG-KEGCLFHNREREESIRDEVLTTNLEIEDLVQYAEKEKGCPYYASRKAI 275
Query: 257 DDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQ 316
+LV PY+ I+N R A+ +D+K ++I DEAHN+ + D S + +L
Sbjct: 276 PYLKLVLLPYNLILNKKSREALGIDLKNQVVIFDEAHNLINAIGDLFSPTVTLSMLSSSH 335
Query: 317 MELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRELQEAN 376
+++ + +R L+ T KAL L
Sbjct: 336 SQID---------------------AYYQRYSDRLSSESHSFIIHLQTILKALSHLLTTK 374
Query: 377 ISRQCFPILLECATKAIKEATDTESELPHLSGMSVITLEGLFSSLTYFFSRNG------- 429
S F ++ + ES + + IT + + L F G
Sbjct: 375 PSN--FGMVNIFTVNRFIQHLHLES-INLFDILHFITSKRIVQKLNGFVDTLGEDGKPPV 431
Query: 430 SH---VSDYQLAL------QKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSII 480
SH V+D+ LAL + + SK+ G L LNP+V FK++ + S+I
Sbjct: 432 SHFPAVTDFILALTNDNEDARVVVSYSKDNGP----FLRFLLLNPSVYFKEIVDECRSVI 487
Query: 481 LTSGTLSPMNSFSSELGVQFG----TCLEAPHVIDVDLQVLTSVISTGP----------- 525
+T GTL P + FSS+L L PH++ D V T
Sbjct: 488 ITGGTLQPFSEFSSQLFPHLSQDRIVSLSLPHILSPDHVGAFYVTHTATRQEMRFDFSNR 547
Query: 526 DNYPLNASYKTADG----------------YKLMEKLCNRWRETGQWSRLNAKKPLFVEP 569
+N L + + G + +++ TG++S LN KP+F E
Sbjct: 548 ENPSLLSDLASKLGILCRTVPRGLVVFFPSFSMLQTTLRFLHSTGKFSSLNELKPIFSEE 607
Query: 570 KGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAV 629
+ ++ F + + S+G+ V ++ EG N + +
Sbjct: 608 R--EKDVFAAYSSYLKDHPSKGALLFAVIGGKLS-EGINFSDDLG--------------- 649
Query: 630 CRGKIVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRH 689
R +VG+P+PN D+ + + KY D ++ G ++Y N +A+NQAIGR RH
Sbjct: 650 -RCVAIVGMPYPNKTDVVLQERMKYLDQQKAGL----GQDYYSNLCIKAVNQAIGRAFRH 704
Query: 690 RFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
+ D+ +++ LD R+ ++ R+ +++W+ ++ D L+ L++F++
Sbjct: 705 KEDWASVVFLDYRYCQQSIRSRLTRWIDNRGLVCNNDDVLLKQLQAFYQ 753
>gi|403351116|gb|EJY75039.1| putative: regulator of telomere elongation helicase 1 [Oxytricha
trifallax]
Length = 1087
Score = 153 bits (386), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 103/326 (31%), Positives = 156/326 (47%), Gaps = 80/326 (24%)
Query: 458 LSLWCLNPAVVFKDVAELS-LSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQV 516
++LWC NP+ F+ + E +II +SGTL+P++++ SEL F LE HVID D QV
Sbjct: 460 IALWCFNPSFAFQSLLEEKPRNIIFSSGTLAPLHTYESELETTFPIKLENDHVIDKDSQV 519
Query: 517 LTSVISTGPDNYPLNASYKTAD-----------------------------GYKLMEKLC 547
+ S+++ DN + S++ + Y +++KL
Sbjct: 520 MVSILTHDIDNKQIQFSFEKREDLNFYLVFARTLARIFAKVHQGGILVFLPSYTVLKKLH 579
Query: 548 NRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGN 607
WR+ + L + +F+EP+ + +++ + K A+ +KR
Sbjct: 580 KVWRDNKLYKDLFKQWDIFIEPQDQVKN----------SALFEDYKRAIQTQKR------ 623
Query: 608 NDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKK 652
A F+AVCRGK I+ GIP+P I D +V KK
Sbjct: 624 ----------------AVFIAVCRGKLSEGIDFTDDVARCVIMAGIPYPQIYDPKVITKK 667
Query: 653 KYND-TYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAH 711
Y D Y K++++GN+WY QA RA+NQAIGR IRH D+GAIIL+DER+ +
Sbjct: 668 DYLDRKYAQGKSIINGNQWYKLQACRAINQAIGRVIRHINDFGAIILMDERYVS--HNIE 725
Query: 712 ISKWLRKSIKQYDSFDASLEGLKSFF 737
ISKWL K Y+ F L++FF
Sbjct: 726 ISKWLNLRKKIYNQFVDLEVDLENFF 751
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 86/197 (43%), Gaps = 24/197 (12%)
Query: 145 TIFYASRTHSQISQVISEYK-KTAYRVPMAVLASRKHYCTNKYVRDK---ENIDEECKLL 200
TI Y +RTHSQI+Q+ E K + Y + ++ ASRK C + + ++ +++ CKLL
Sbjct: 66 TIIYCTRTHSQINQIFEEIKLRLPYVLRVSPFASRKQSCIFENLPEQFPGNSLNLSCKLL 125
Query: 201 LGDRNLGCPQFK-NVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDA 259
R L Q K N L+ G +++ + + V+V + GC +Y S +
Sbjct: 126 ---RKLNTIQQKLNKDATLKLTKLKSGSKNDIENCDQQVSV--IKSGCPFYYGYSFENKM 180
Query: 260 QLVFCPYSYIINPVIRGAMEVD--------------IKGAILILDEAHNIEDIARDAGSV 305
+ +I A + + +++I DE HNI+ + +
Sbjct: 181 SMKQSEPKQFGQIIISSAQQDKSINLVASQIPWDQPLSDSVIIFDEGHNIDTFCEELFTF 240
Query: 306 DIDEDVLLKLQMELEQV 322
DI + L + +L Q+
Sbjct: 241 DISINDLFQAYQQLNQI 257
>gi|71413416|ref|XP_808847.1| helicase [Trypanosoma cruzi strain CL Brener]
gi|70873137|gb|EAN86996.1| helicase, putative [Trypanosoma cruzi]
Length = 951
Score = 153 bits (386), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 108/355 (30%), Positives = 158/355 (44%), Gaps = 92/355 (25%)
Query: 441 KYIKRDSK--NPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGV 498
++I R +K N G N +L WCL+ + K + S++LTSGTLSP+ F++ELG+
Sbjct: 403 RFILRGAKGANRGSN-QRSLGYWCLDTSCAVKTIVAGLNSLLLTSGTLSPLEHFAAELGI 461
Query: 499 QFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYK---------------------TA 537
+FG L+ HVI + QVL V+ GP LN +Y T
Sbjct: 462 EFGVSLKGAHVIQQN-QVLGCVLCKGPSGEKLNGAYAYRNSVDYRVGLGMSLVNISRNTP 520
Query: 538 DG-------YKLMEKLCNRWRE-TGQ-------WSRLNAKKPLFVEPKGGSQEDFEIVLK 582
G Y + + WR +G+ W L KP+FVEP S D + ++
Sbjct: 521 GGVLVFFPSYVALNAAIDLWRAGSGRPGESLTVWGMLEDLKPVFVEPVEAS--DLQTIVS 578
Query: 583 HYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKI-------- 634
+ + ++A +GA LAVCRGKI
Sbjct: 579 RFQREV----------------------------DSAPSRGAILLAVCRGKISEGIDFAD 610
Query: 635 -------VVGIPFPNINDIQVSLKKKYNDTYRSSK-----NLLSGNEWYCNQAFRALNQA 682
V GIPF N D+ V LK++Y S + L +G++WY N+A RA+NQ
Sbjct: 611 NHGRCVVVAGIPFANHTDLFVRLKREYLTRVASHRPKVRGKLFTGDDWYMNEAMRAVNQC 670
Query: 683 IGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFF 737
+GR IRH+ DYG ++L DERF E + +S+W+ Y F + + FF
Sbjct: 671 VGRVIRHKDDYGVVLLADERFAERLD--GLSEWVANRCSIYREFREAYASVAQFF 723
Score = 148 bits (373), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/284 (33%), Positives = 136/284 (47%), Gaps = 59/284 (20%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+G + V FP+ PY +Q+ +M VI L G C+ALLESPTGTGK+L LLCS LAW
Sbjct: 6 IGDVGVSFPFNPYPAQVEYMRAVIDALK-----GRCNALLESPTGTGKTLCLLCSALAWL 60
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVK 139
+ +G T Q ++
Sbjct: 61 EK------------------------------------------RHGMTQQ----RYQIE 74
Query: 140 KKMTPTIFYASRTHSQISQVISEYKKTAYR--VPMAVLASRKHYCTNKYVRDKENIDEE- 196
+ Y SRTH+Q+S VI E K+T Y M++L SR+H C N V +
Sbjct: 75 GAGRTRVIYCSRTHAQLSHVIRELKRTRYGDIFSMSLLGSREHMCVNSQVLRLSTAQAQQ 134
Query: 197 --CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARS 254
C L ++N C ++ GH + K G VHD+EDLV+ G+ C YY+ R
Sbjct: 135 SMCNTLREEKN--CRFYRGFQARNGHNTAVKDG-KWVHDMEDLVSDGRKCGYCPYYSERE 191
Query: 255 MADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDI 298
A +A +VF PY+Y+ + IR + ++KG+ILI+DEAHN+ +
Sbjct: 192 EAKEADIVFLPYNYVFDLSIRKQLPFNLKGSILIVDEAHNLPSV 235
>gi|402885129|ref|XP_003906018.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein 8
[Papio anubis]
Length = 845
Score = 152 bits (385), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 171/692 (24%), Positives = 290/692 (41%), Gaps = 152/692 (21%)
Query: 146 IFYASRTHSQISQVISEYKKTAY--RVPMAVLASRKHYCTNKYVRD---KENIDEECKLL 200
I+Y SRTHSQ++Q + E KK+ + V + L SR++ C N+ V+ + I++ C +
Sbjct: 203 IYYCSRTHSQLAQFVHEVKKSPFGKDVRLVSLGSRQNLCVNEDVKSLGSVQLINDRCVDM 262
Query: 201 LGDRNL-------------------GCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVG 241
R+ CP F N H+ G L+ EV DIE L+ +G
Sbjct: 263 QRSRHEKKKGAEEEKPKRRRQEKQAACP-FYN-HEQMG--LLRDEALAEVKDIEQLLALG 318
Query: 242 QVVRGCSYYAARSMADDAQLVFCPYS---YIINPVIRGA-------ME-----------V 280
+ R C YY +R AQLV PY ++ P + A ME +
Sbjct: 319 KEARACPYYGSRLAIPAAQLVVLPYQIAWFVFFPQLCQAHSQLLQYMERYGKRLKAKNLM 378
Query: 281 DIKGAILILD-----------EAHNIEDIARDAGSVDIDEDVLLKLQMELEQVCSVNPMI 329
+K + +L+ + N + +++ + D L + Q++ + V
Sbjct: 379 YLKQILYLLEKFVAVLGGNIKQNPNTQSLSQTGTELKTINDFLFQSQIDNINLFKVQRYC 438
Query: 330 YQPLIEMTQDLVGWIERRKATLAKRE------FQHFFSCWTGDKALRELQEANISRQCFP 383
+ +I ++ L G+ ER A L+ RE FQ F L+ LQ P
Sbjct: 439 EKSMI--SRKLFGFTERYGAVLSSREQPKLAGFQQF---------LQSLQPRTTEAPAAP 487
Query: 384 ILLECATKAIKEATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYI 443
A ++++ P ++ +EG ++LT +++G + Q +L +
Sbjct: 488 ------------ADESQASAPR-PASPLMHIEGFLAALTTA-NQDGRVILSRQGSLSQ-- 531
Query: 444 KRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSEL----GVQ 499
TL LNPAV F V + ++++ GT+ P++ F +L GV+
Sbjct: 532 ------------STLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPVSDFRQQLLACAGVE 579
Query: 500 FGTCLE--APHVIDVDLQVLTSVISTGPDNYPLNASYKTADGYKLMEK----LCN----- 548
+E HVI D +L VI +G N PL +++ + ++M++ LCN
Sbjct: 580 AERVVEFSCGHVIPPD-NILPLVICSGISNQPLEFTFQKRELPQMMDEAGRILCNLCSVV 638
Query: 549 -------------------RWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSIS 589
W + G RL A+K +F EPK Q E VL Y I
Sbjct: 639 PGGVVCFFPSYEYLRQVHAHWEKGGLLGRLAARKKIFQEPKSAHQ--VEQVLLAYSRCIQ 696
Query: 590 QGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVS 649
C ++R + G L+ + + + + L C ++VG+PFPNI ++
Sbjct: 697 ---ACG---QERGRVTGALLLSVVGGKMSEGINFSDNLGRC--VVMVGMPFPNIRSPELQ 748
Query: 650 LKKKYNDTY--RSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEER 707
K Y D R+ G N +A+NQ+IGR IRH+ D+ +I+LLD+R+
Sbjct: 749 EKMAYLDQTLPRAPGQAPPGKNLVENLCMKAVNQSIGRAIRHQKDFASIVLLDQRYARPP 808
Query: 708 NRAHISKWLRKSIKQYDSFDASLEGLKSFFRD 739
A + W+R ++ +F ++ ++ F R+
Sbjct: 809 VLAKLPAWIRARVEVKATFGPAIAAVQKFHRE 840
>gi|407410515|gb|EKF32919.1| helicase, putative [Trypanosoma cruzi marinkellei]
Length = 951
Score = 152 bits (384), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/284 (34%), Positives = 138/284 (48%), Gaps = 59/284 (20%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+G + V FP+ PY +Q+ +M VI L+ G C+ALLESPTGTGK+L LLCS LAW
Sbjct: 6 IGDVGVSFPFNPYPAQVEYMRAVIDALN-----GRCNALLESPTGTGKTLCLLCSVLAWL 60
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVK 139
+ +G T Q ++
Sbjct: 61 EK------------------------------------------RHGMTQQ----RYQME 74
Query: 140 KKMTPTIFYASRTHSQISQVISEYKKTAYR--VPMAVLASRKHYCTNKYVRDKENIDEE- 196
+ Y SRTH+Q+SQVI E K+T Y M++L SR+H C N V +
Sbjct: 75 GAGRTRVIYCSRTHAQLSQVIRELKRTRYGDIFSMSLLGSREHMCVNPQVLRLPTAQAQQ 134
Query: 197 --CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARS 254
C L ++N C ++ GH + K G VHD+EDLV+ G+ C YY+ R
Sbjct: 135 SMCNTLREEKN--CRFYRGFQARNGHNTAMKDG-RWVHDMEDLVSDGRKCGYCPYYSERE 191
Query: 255 MADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDI 298
A +A +VF PY+Y+ + IR + D+KG+ILI+DEAHN+ +
Sbjct: 192 EAKEADIVFLPYNYVFDLSIRKQLPFDLKGSILIVDEAHNLPSV 235
Score = 146 bits (369), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 105/354 (29%), Positives = 153/354 (43%), Gaps = 90/354 (25%)
Query: 441 KYIKRDSKNPG-GNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQ 499
++I R K G +L WCL+ + K + S++LTSGTLSP+ F++ELGV+
Sbjct: 403 RFILRGGKGADRGANQRSLGYWCLDTSCAVKKLVAGLNSLLLTSGTLSPLEHFAAELGVE 462
Query: 500 FGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYK---------------------TAD 538
FG L+ HVI + QVL V+ GP LN +Y T
Sbjct: 463 FGVSLKGAHVIQQN-QVLGCVLCKGPSGEKLNGAYAYRNSVDYRVGLGMSLVNISRNTPG 521
Query: 539 G-------YKLMEKLCNRWRE-TGQ-------WSRLNAKKPLFVEPKGGSQEDFEIVLKH 583
G Y + WR +G+ W L KP+FVEP S D + ++
Sbjct: 522 GVLVFFPSYVALNAAIELWRAGSGRPGETLTVWGMLEDLKPVFVEPVEAS--DLQTIVSR 579
Query: 584 YYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKI--------- 634
+ + ++A +GA LAVCRGKI
Sbjct: 580 FQREV----------------------------DSAPSRGAILLAVCRGKISEGIDFADN 611
Query: 635 ------VVGIPFPNINDIQVSLKKKYNDTYRSSK-----NLLSGNEWYCNQAFRALNQAI 683
V GIPF N D+ V LK+++ + L +G++WY N+A RA+NQ +
Sbjct: 612 HGRCVVVAGIPFANHTDLFVRLKREHLTRVAPHRPKVRGKLFTGDDWYMNEAMRAVNQCV 671
Query: 684 GRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFF 737
GR IRH+ DYG ++L DERF E + +S+W+ Y F + + FF
Sbjct: 672 GRVIRHKDDYGVVLLADERFAERLD--GLSEWVANRCSIYREFREAYASVAQFF 723
>gi|213404244|ref|XP_002172894.1| fanconi anemia group J protein [Schizosaccharomyces japonicus
yFS275]
gi|212000941|gb|EEB06601.1| fanconi anemia group J protein [Schizosaccharomyces japonicus
yFS275]
Length = 847
Score = 152 bits (383), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 161/651 (24%), Positives = 276/651 (42%), Gaps = 107/651 (16%)
Query: 158 QVISEYKK---TAYRVPMAV--LASRKHYCTNKYVR---DKENIDEECKLLLGDRNLGCP 209
Q + E +K T + P+ LASRK+ C N+ V+ I+E+C + G+ CP
Sbjct: 235 QFLDEVRKLDMTTFTTPVRAISLASRKNLCINENVKRLGSAALINEKCIEIQGN----CP 290
Query: 210 QFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYI 269
+ + + EV D+ED++ +G+ + C YY R A +V PY+ +
Sbjct: 291 FLQATTPI---DDFRDAVLAEVMDMEDMITLGEQTQTCPYYGIREAIAPAHIVAVPYAML 347
Query: 270 INPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELE--------Q 321
+ R ++ + ++ + ILDEAHN+ D S + + +L Q +L+ +
Sbjct: 348 LQQSTRDSLGISLRDNVCILDEAHNVIDSICSILSASVSQTEVLLCQKQLQCYLQRFAKR 407
Query: 322 VCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREF------QHFFSCWTGDKALRELQE- 374
+ N M Q L+ + +L+ ER LA +E F + T L L +
Sbjct: 408 LSGPNRMHIQQLLRIVDELLHVFER----LAGQEACTIDPATLFIAHGTDQINLHRLTQY 463
Query: 375 ---ANISRQCFPILLECATKAIKEATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSH 431
+ I+R+ ++ +A ++A + +P +G VI L F + +
Sbjct: 464 ISASKIARKANTFHVKNTLEA-EDADHSRHAVP--TGTPVIM------KLATFLTAIANP 514
Query: 432 VSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNS 491
+ +L + + G N L L+P+ +AE + S+IL GT+SPM+
Sbjct: 515 SPEGRL-FYRMESVEETVQGHNSKAVLEYALLDPSHEIAALAEQARSVILAGGTMSPMDE 573
Query: 492 FSSELGVQFGTCLE---APHVIDVDLQVLTSVISTGPDNYPLNASYK------------- 535
+ L F ++ H++ + + T V+S G P +YK
Sbjct: 574 IAQLLFPSFLDRVKQFSCGHIVP-ESNICTVVLSKGTGGTPFRFTYKNRGDVNALQDLGR 632
Query: 536 --------TADG-------YKLMEKLCNRWRETGQWSRLNAKKPLFVEPK-------GGS 573
DG ++ + + + W+++ W RL +KP+F E K GS
Sbjct: 633 TMLNLTAVIPDGVVVFFCSFRHLSEAISCWKKSDLWLRLCKRKPIFYEDKEREALAGDGS 692
Query: 574 QEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGK 633
++ V + Y S++ G +G L+ I + + + L C
Sbjct: 693 KKS---VFEDYCASVTAG-------------KGGLLLSVINGRLSEGINFSDRLGRCVA- 735
Query: 634 IVVGIPFPNINDIQVSLKKKYNDTYRSSKN---LLSGNEWYCNQAFRALNQAIGRCIRHR 690
VVG+PFPN D++ K + SSK + E+ N RA NQ+IGR IRH+
Sbjct: 736 -VVGMPFPNAQDVRWQAKMSFVKEKMSSKTEKGIDLDYEFAENTCMRAANQSIGRAIRHK 794
Query: 691 FDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFRDVK 741
DY I+LLDER+ + +A + KWL +I SF ++ + FFR K
Sbjct: 795 DDYACILLLDERYNKPSTQAKLPKWLANNITHAQSFGVAMRQIAQFFRGKK 845
Score = 49.3 bits (116), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 30/51 (58%), Gaps = 5/51 (9%)
Query: 28 PYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
PY PY QL FM TL +G+ + ESPTGTGKSLSLLC L W
Sbjct: 41 PYIPYSIQLDFM----KTLFDVIENGNI-GIFESPTGTGKSLSLLCGALTW 86
>gi|170089159|ref|XP_001875802.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164649062|gb|EDR13304.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 854
Score = 152 bits (383), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 160/684 (23%), Positives = 266/684 (38%), Gaps = 127/684 (18%)
Query: 146 IFYASRTHSQISQVISEYKK-----------------TAYRVPMAV----LASRKHYCTN 184
I+YASRTHSQ++QV+ E + + Y P + L SRK C N
Sbjct: 199 IYYASRTHSQLAQVLPELSRLKLRHSLSSVQNHHSESSQYPTPPSTRTVSLGSRKQLCIN 258
Query: 185 KYVRDK-ENIDEECKLLLGDR-NLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQ 242
+R K ++DE C+ LLG++ C + + + DIEDL G+
Sbjct: 259 DELRAKSRDLDESCRELLGEKAEKRCQYLPRIEEDVKMLDFRDQILAYPKDIEDLATAGR 318
Query: 243 VVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDA 302
C Y+ +R A+LV PY+ ++ R A+ +D+K I+++DEAHN+
Sbjct: 319 HAHICPYFGSRRAIPQAELVTLPYNLLLQKSAREALGIDLKDQIVVIDEAHNLIPTLLSL 378
Query: 303 GSVDIDEDVLLKLQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSC 362
+ + + + L QVCS Y V + ++ + + +
Sbjct: 379 STTRLPYSI---IATSLIQVCS-----YVSRFRTRLSAVNMLHLKRLVVFLDALKKYVLE 430
Query: 363 WTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVITLEGLFSSLT 422
W + + E T+ +K A E ++GM+++ +EG
Sbjct: 431 WKDAREGKGPSE--------------KTEVMKVAELMEKMGKKVAGMNLLEIEGYLKRSK 476
Query: 423 YFFSRNGSHVSDYQLALQKYIKRDSKNPG---------------------GNWTHTLS-- 459
+R + SD Q + R N G G T TL+
Sbjct: 477 --VARKIAGYSDKQAEKEADSTRKQNNKGTIPPLHAVEDFMVSLTRTNDDGRVTFTLTPG 534
Query: 460 ----------LWCLNPAVVFKDVAELSLSIILTSGTLSPM----NSFSSELGVQFGTCLE 505
LNP+ F +V + + ++IL GT+SP+ N S L T
Sbjct: 535 LNGENTVELQYQLLNPSPTFTEVVDEARAVILAGGTMSPISDVVNQLFSHLPPTRVTSFS 594
Query: 506 APHVID-VDLQVLTSVISTGPDNYPLNASYKTAD-------------------------- 538
H+I ++LQ L V+ GP L +K A
Sbjct: 595 CGHIIPAINLQAL--VVCKGPRGGDLE--FKAAQQGDPAVISELGQILFNFASLVPAGMI 650
Query: 539 ----GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKC 594
Y + W ++G + KK F EP+ D E VL+ Y SI+ C
Sbjct: 651 VFFPSYHFLNVAKAAWTKSGMLEKFGLKKTTFFEPE--ESVDVEKVLQEYAKSITV---C 705
Query: 595 AVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKY 654
+ K+ G I ++ + A LA R ++VG+PF N+ ++ + KY
Sbjct: 706 YQISSPTGKKGGALLFAVIGAKLSEGLNFADDLA--RAVVIVGLPFANLASPELRERMKY 763
Query: 655 NDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISK 714
+ + E Y N A+NQ+IGR +RH+ D+ +++LLD R+ R + K
Sbjct: 764 VKRLEEKRG-DAAAELYENMCMNAVNQSIGRAVRHKGDWASLLLLDRRYATASIRNKLPK 822
Query: 715 WLRKSIKQYDSFDASLEGLKSFFR 738
W+ + D F +++ + SF++
Sbjct: 823 WIGSGLIVRDGFGPTVKEMGSFYK 846
Score = 47.0 bits (110), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 6/75 (8%)
Query: 27 FPYQP-YGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCKLK 85
FPY P Y Q+ M + +++++ ++ESPTGTGK+LSLLC+ L W + K +
Sbjct: 14 FPYDPPYSIQVDLMRHLYTSIEQ-----RAVTIVESPTGTGKTLSLLCAALTWLSDEKER 68
Query: 86 NQLANISHSKPDTEA 100
+ + + D A
Sbjct: 69 ARRGKLKAAADDGTA 83
>gi|354547011|emb|CCE43744.1| hypothetical protein CPAR2_213880 [Candida parapsilosis]
Length = 790
Score = 152 bits (383), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 204/842 (24%), Positives = 340/842 (40%), Gaps = 221/842 (26%)
Query: 28 PYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLA---------- 77
P+ PY QL M + T++ +G+ L ESPTGTGK+LS++CST+
Sbjct: 13 PFAPYDIQLKLMDAIYDTIE----NGYKIGLFESPTGTGKTLSIICSTMTWLRDYKRNHV 68
Query: 78 ----------------WQQNC-----------KLKN---QLANISHSKPD---TEAVTDP 104
W +N KLK L + S D TE T
Sbjct: 69 FEIDAESEESSDDEPEWVKNAYRSSIVDKSKDKLKQFEQHLDQVEQSHGDKVRTEFTTHQ 128
Query: 105 ------LANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKKM------------TPTI 146
+ F+P+ S P AQ NK + + M I
Sbjct: 129 KIKRRQVTQEETFLPDDYHSDGGPDL--LEAQNVKLNKEINRLMHREENEAKDYHCKTKI 186
Query: 147 FYASRTHSQISQVISEYKKTAY---------RVPMAVLASRKHYCTNKYVR--------- 188
F++SRTHSQ++Q S+ + T++ R + SRK C N+ V
Sbjct: 187 FFSSRTHSQLNQFSSQLRLTSFDSSFDDLTERTKYLPIGSRKQLCVNEKVSKCGDQSIND 246
Query: 189 ---DKENIDEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVR 245
D + E C L D++L +F ++ R + DIEDL +G +
Sbjct: 247 ACIDLQKTKEGCTYLTKDQSL-VKEFSDLSLSR------------IRDIEDLATLGTELH 293
Query: 246 GCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSV 305
C YY+ R + A++V PY + R A +DIK AI+I+DEAHN+ D SV
Sbjct: 294 ACPYYSVRKGLESAEVVSLPYQLLFQKSARDAWGLDIKDAIIIIDEAHNVIDSITSLYSV 353
Query: 306 DIDEDVLLKLQMEL--------EQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKR-EF 356
I L K+ L +++ S N + L ++ + L ++E ++ + K +
Sbjct: 354 QISVRQLHKVMQSLKVYLTKFAKRLNSGNRINIIKLTKICKVLATFMESQEVSPGKEVKV 413
Query: 357 QHFFSCWTGDKALRELQEANISRQCFPILLECATKA-----IKEATDTESELPHLSGMSV 411
+ F TGD NI + L E TK+ I+ + + P S ++
Sbjct: 414 EDIFQDSTGDL-------VNIHK-----LDEYLTKSKIAYKIESYIEKSEDSPGASSPAL 461
Query: 412 ITLEGLFSSLT-------YFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLN 464
+ +LT +++ + +++QL +Y+ L+
Sbjct: 462 FEIAKFLRALTNPRKEGKFYWDKIA---NEFQL---RYM------------------LLD 497
Query: 465 PAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFG----TCLEAPHVIDVD-LQVLTS 519
P++VF ++ + ++L GT+ PM F+ L Q H++ D L+V T
Sbjct: 498 PSIVFNEIVADAKCVLLCGGTMEPMTDFTDFLMPQVPQHQIKAFSCQHIVPNDNLKVFT- 556
Query: 520 VISTGPDNYPLNASYKTAD----------------------------GYKLMEKLCNRWR 551
+ G + + SY + Y + K+ W+
Sbjct: 557 IDKWGIE---FDFSYNRREDKSQMEKLGQFILQICKVVPHGVVIFFSSYNFLYKVVQYWQ 613
Query: 552 ETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLN 611
+T + +L A K +F EP S D VL Y N I+ K A++ L+
Sbjct: 614 QTNLFQKLTAFKTIFQEPTNSSNVD--AVLSEYSNVITSQEKGALL------------LS 659
Query: 612 TIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYND--------TYRSSKN 663
+ + + + LA R I++G+P+PN ++ K+ + + + +S+K
Sbjct: 660 VVGGKLSEGINFSDNLA--RAVIMIGLPYPNAFSGEIIAKRAFIESQVLAKGGSLQSAKE 717
Query: 664 LLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQY 723
S NE+Y N +A+NQ+IGRCIRH DY I L+D+R+++ R + +SKW++ +
Sbjct: 718 --SSNEYYENLCMKAINQSIGRCIRHGNDYALIYLVDKRYKQPRVQNKLSKWVKDRLVTD 775
Query: 724 DS 725
DS
Sbjct: 776 DS 777
>gi|149248494|ref|XP_001528634.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|206558158|sp|A5DUW8.1|CHL1_LODEL RecName: Full=ATP-dependent RNA helicase CHL1; AltName:
Full=Chromosome loss protein 1
gi|146448588|gb|EDK42976.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 892
Score = 151 bits (382), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 174/669 (26%), Positives = 282/669 (42%), Gaps = 114/669 (17%)
Query: 144 PT-IFYASRTHSQISQVISEYKKTAY---------RVPMAVLASRKHYCTNKYVRDK--- 190
PT IF+ SRTHSQ++Q S+ + T + R L SRK C N V+++
Sbjct: 254 PTKIFFTSRTHSQLNQFSSQLRLTKFDASFKDLEERTKYLPLGSRKQLCINDKVKNRKGE 313
Query: 191 ENIDEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKG----GCHEVHDIEDLVNVGQVVRG 246
++I++ C + L GC N S K ++ DIEDL ++G +
Sbjct: 314 QSINDAC-IDLQKTKKGCTYLPNPSNSSTISSATKEFADLSLAQIRDIEDLGDLGSSLHT 372
Query: 247 CSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVD 306
C YY+ R A+++ PY ++ R A+++DIK +I+I+DEAHNI D SV
Sbjct: 373 CPYYSVREGIKLAEVISLPYQLLLQSGSRDALKLDIKNSIIIIDEAHNIFDTLTSLYSVK 432
Query: 307 IDEDVL------LKLQME--LEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQ- 357
I L LK+ M L+++ S N + L ++ + L+ +++ A AK Q
Sbjct: 433 ITAAQLSRTIKALKIYMTKFLKKLNSGNRINLMKLTKLCKLLMDFLQSDLAKSAKLGDQV 492
Query: 358 ---HFFSCWTGDKALRELQEANISRQCFPILLECATKAIK-EATDTESELPHLSGMSVIT 413
F TGD EA +++ L+ + I E T+ +L S + +
Sbjct: 493 VGEEIFQGSTGDLVNIHKMEAYLNKSKIAFKLQSYMEKIGVEDVGTDFKLNSSSPI-LFD 551
Query: 414 LEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVA 473
+ L+Y + G D R + GG +L+ L+P VFK++
Sbjct: 552 IVKFLKCLSY-PKKEGKFFWD----------RIYGDNGGCEV-SLNYMLLDPCAVFKEIV 599
Query: 474 ELSLSIILTSGTLSPMNSFSSEL-------GVQFGTCLEAPHVI---------------- 510
+ + +IL GT+ P + F+ L ++ C H+I
Sbjct: 600 DQAKCVILCGGTMEPTSDFTDYLFPSIKHNKIKKFAC---GHIIPKNNLKVIPVGQYYGN 656
Query: 511 ---------DVDL-----QVLTSVISTGPDNYPLNASYKTADGYKLMEKLCNRWRETGQW 556
D+D + L + P + S Y+L+ + WRET +
Sbjct: 657 FDFLYNRRNDLDQFKRLGEFLIKICEIVPAGIVVFIS-----SYQLLSDIVKIWRETTIY 711
Query: 557 SRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQ 616
SRLN K +F E ++ +L Y I+ K A++ + G I
Sbjct: 712 SRLNLLKQVFEESVENTK--LTSLLSEYSYVINTQCKGAIL----LAVVGGKMSEGINFS 765
Query: 617 ENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYNDTYRSSKN------LLSGNEW 670
+N + R I+VG+P+PN ++ K+ + + +K E+
Sbjct: 766 DN----------LARAVIMVGMPYPNAFSGEIVAKRNFIEEQVITKGGTIQQARAKSYEY 815
Query: 671 YCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQ---YDSFD 727
Y N +A+NQ+IGR IRH DY IILLD R+Q + + +SKW+R I ++FD
Sbjct: 816 YDNLCMKAVNQSIGRSIRHAKDYAIIILLDYRYQTPKVQGKLSKWVRDRIANNTTANTFD 875
Query: 728 ASLEGLKSF 736
LE K F
Sbjct: 876 PFLETKKFF 884
Score = 57.0 bits (136), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 45/77 (58%), Gaps = 12/77 (15%)
Query: 7 PNPNYRKPLNAYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTG 66
P+P+ R + +H PY PY QL FM + TL ++G+ + ESPTGTG
Sbjct: 5 PSPSARTCRDYHH--------PYDPYDIQLQFMDALYETL----QNGYKIGMFESPTGTG 52
Query: 67 KSLSLLCSTLAWQQNCK 83
K+LS++CS++ W ++ K
Sbjct: 53 KTLSIICSSMTWLRDYK 69
>gi|340386378|ref|XP_003391685.1| PREDICTED: Fanconi anemia group J protein homolog, partial
[Amphimedon queenslandica]
Length = 291
Score = 151 bits (381), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 158/283 (55%), Gaps = 14/283 (4%)
Query: 172 MAVLASRKHYCTNKYVRDKENIDEECKLLLGDRNLG--CPQFKNVH-KVRGHPSLQKGGC 228
M +LASR H C + V N EECK L+ D G C + V K+ L++ G
Sbjct: 1 MVILASRDHTCIHPQVSTSRNKKEECKALI-DYKYGASCAFYHKVQQKLGSQYKLRENGI 59
Query: 229 HEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILI 288
DIEDLV +G+ ++ C YY+ R++ ++A+++FCPY+Y+I+P+IR M + ++ +ILI
Sbjct: 60 TTAWDIEDLVTLGRKIKTCPYYSTRALFEEAEIIFCPYNYLIDPLIREQMMIRLEDSILI 119
Query: 289 LDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQVCS-VNPMI---YQPLIEMTQDLVGWI 344
DEAHN+ED AR+A S+ ++ + L +++ E++++ ++P I Y+ + ++ W+
Sbjct: 120 FDEAHNMEDAAREAASLTVNSNQLKEVEEEIDKIMEFLSPEIQNSYRIVYTYVVNISQWM 179
Query: 345 ERRKATLAKREFQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESEL- 403
+ L R+F+ S W G+ L L+ I+ + +++ I + + ES+
Sbjct: 180 ATQSEKLTIRKFEESCSVWNGNDFLPFLKGIGITIESHSMIMHHVRTIIDDTFEQESKED 239
Query: 404 -----PHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQK 441
P L V ++ LF + Y F ++ +++DY++AL+K
Sbjct: 240 KRLPPPKLPVGIVHIIDSLFIIMGYLFKQSQKYLNDYRIALKK 282
>gi|440491198|gb|ELQ73865.1| Helicase of the DEAD superfamily, partial [Trachipleistophora
hominis]
Length = 867
Score = 151 bits (381), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 110/374 (29%), Positives = 177/374 (47%), Gaps = 48/374 (12%)
Query: 146 IFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEECKLLLGDRN 205
IF SRTH Q+ Q++++ + TAY + VLASR+ C NK + L GD N
Sbjct: 71 IFICSRTHKQLDQLVAQLRATAYAPKVCVLASRRALCLNK------------QALKGDVN 118
Query: 206 LGCPQFKNVHKVR---GHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLV 262
C + R G L K +VHDIE+L G+ GC YYA+R +++DA +
Sbjct: 119 ASCRDLVKKGECRYFMGKERLAKS-IGDVHDIEELRQAGERCTGCPYYASRMLSEDAAIT 177
Query: 263 FCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQV 322
F PY+Y+++P++R M +++K +++I+DEAHNIED R AGS+++ D + + EL V
Sbjct: 178 FMPYNYVVDPMVRRTMGIELKDSVVIVDEAHNIEDACRSAGSIELTNDTIDIMLKELVGV 237
Query: 323 CSVNPMIYQPLIEMTQDLV--GWIERRKATLAKREFQHF-----FSCWTGDKALRELQEA 375
Y+ + E +DLV + R+ L+ + +C+ GD+ ++ L
Sbjct: 238 -------YRRVEEYREDLVVLNYFLRKMRGLSDVKMTRSSADSECACFKGDEIVQHLAHK 290
Query: 376 NISRQCFPILLECATKAIKEATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDY 435
+ + + A E L L T+E L S L FS Y
Sbjct: 291 EVVPELIARMRMNALFKKNEDLKDAFSLVFLQ-----TMESLVSVLMLVFS---GKARSY 342
Query: 436 QLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSE 495
L ++ G +L+ L+ V+F V + ++++ SGTL+P ++ +E
Sbjct: 343 ALIVK----------GAPSAPSLNFMLLDADVMFNAVVQHVHALVVLSGTLTPFSAVENE 392
Query: 496 LGVQFGTCLEAPHV 509
L F L AP V
Sbjct: 393 LNHHFTYSLVAPAV 406
Score = 80.1 bits (196), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 87/179 (48%), Gaps = 28/179 (15%)
Query: 629 VCRGKIVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIR 688
+ R I+VG+P PNI +I V L + + WY NQ F+A+NQAIGRC+R
Sbjct: 641 LARAVILVGMPCPNIKEIGVELMRNHRPG------------WYENQIFKAVNQAIGRCVR 688
Query: 689 HRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFF-------RDVK 741
HR D+G + L+D R++ +++R + W R + + F ++ + F R+
Sbjct: 689 HRMDWGGVFLVDVRYRRDKDR--LCGWCRDRMVYGEYFGDVVDDFREFVGRMKEMDRNRS 746
Query: 742 GWVG--KKMFNGLENSDNDVDHVSSMDQCKEVTK----QNTQELNKSDHSGQNVQSISK 794
G K + +G EN + D C+E K +N +E + + G N+++ K
Sbjct: 747 SMEGGRKSLMSGGENGKEGCNENGKED-CRESGKEGCNENGKEGCRENGRGNNLENSKK 804
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 40/65 (61%), Gaps = 5/65 (7%)
Query: 15 LNAYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCS 74
++ + I + FP++PY +Q++ ++I L + ++ESPTGTGKS+++LC+
Sbjct: 4 MHKMKINSINITFPFKPYPAQILTCSKIIDCLKNKK-----TGIIESPTGTGKSIAILCA 58
Query: 75 TLAWQ 79
LAW
Sbjct: 59 VLAWH 63
>gi|355785871|gb|EHH66054.1| hypothetical protein EGM_02957 [Macaca fascicularis]
Length = 906
Score = 150 bits (380), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 171/725 (23%), Positives = 292/725 (40%), Gaps = 183/725 (25%)
Query: 146 IFYASRTHSQISQVISEYKKTAY--RVPMAVLASRKHYCTNKYVRD---KENIDEECKLL 200
I+Y SRTHSQ++Q + E KK+ + V + L SR++ C N+ V+ + I++ C +
Sbjct: 229 IYYCSRTHSQLAQFVHEVKKSPFGKDVRLVSLGSRQNLCVNEDVKSLGSVQLINDRCVDM 288
Query: 201 LGDRNL-------------------GCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVG 241
R+ CP F N H+ G L+ EV DIE L+ +G
Sbjct: 289 QRSRHEKKKGAEEEKPKRRRQEKQAACP-FYN-HEQMG--LLRDEALAEVKDIEQLLALG 344
Query: 242 QVVRGCSYYAARSMADDAQLVFCPYSYIINPVIR-------------------------G 276
+ R C YY +R AQLV PY +++ R G
Sbjct: 345 KEARACPYYGSRLAIPAAQLVVLPYQMLLHAATRQAAGIRLQAQVVIIDEAHNLIDTITG 404
Query: 277 AMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMEL----------------- 319
V++ G+ L + ++ + R + + LK + L
Sbjct: 405 MHSVEVSGSQLCQAHSQLLQYMERYGKRLKAKNLMYLKQILYLLEKFVAVLGGNIKQNPN 464
Query: 320 --------EQVCSVNPMIYQPLIE---------------MTQDLVGWIERRKATLAKRE- 355
++ ++N ++Q I+ +++ L G+ ER A L+ RE
Sbjct: 465 TQSLSQTGTELKTINDFLFQSQIDNINLFKVQRYCEKSMISRKLFGFTERYGAVLSSREQ 524
Query: 356 -----FQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMS 410
FQ F L+ LQ P A ++++ P +
Sbjct: 525 PKLAGFQQF---------LQSLQPRTTEAPAAP------------ADESQASAPRPAS-P 562
Query: 411 VITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFK 470
++ +EG ++LT +++G + Q +L + TL LNPAV F
Sbjct: 563 LMHIEGFLAALTTA-NQDGRVILSRQGSLSQ--------------STLKFLLLNPAVHFA 607
Query: 471 DVAELSLSIILTSGTLSPMNSFSSEL----GVQFGTCLE--APHVIDVDLQVLTSVISTG 524
V + ++++ GT+ P++ F +L GV+ +E HVI D +L VI +G
Sbjct: 608 QVVKECRAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHVIPPD-NILPLVICSG 666
Query: 525 PDNYPLNASYKTADGYKLMEK----LCN------------------------RWRETGQW 556
N PL +++ + ++M++ LCN W + G
Sbjct: 667 ISNQPLEFTFQKRELPQMMDEAGRILCNLCSVVPGGVVCFFPSYEYLRQVHAHWEKGGLL 726
Query: 557 SRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQ 616
RL A+K +F EPK Q E VL Y I C ++R + G L+ + +
Sbjct: 727 GRLAARKKIFQEPKSAHQ--VEQVLLAYSRCIQ---ACG---QERGRVTGALLLSVVGGK 778
Query: 617 ENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYNDTY--RSSKNLLSGNEWYCNQ 674
+ + L C ++VG+PFPNI ++ K Y D R+ G N
Sbjct: 779 MSEGINFSDNLGRC--VVMVGMPFPNIRSPELQEKMAYLDQTLPRAPGQAPPGKNLVENL 836
Query: 675 AFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLK 734
+A+NQ+IGR IRH+ D+ +I+LLD+R+ A + W+R ++ +F ++ ++
Sbjct: 837 CMKAVNQSIGRAIRHQKDFASIVLLDQRYARPPVLAKLPAWIRARVEVKATFGPAIAAVQ 896
Query: 735 SFFRD 739
F R+
Sbjct: 897 KFHRE 901
Score = 54.3 bits (129), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 40/68 (58%), Gaps = 5/68 (7%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
VG I FP+ PY Q FM + L+ A + G + ESPTGTGKSLSL+C L+W
Sbjct: 8 VGTIHFPFPFTPYSIQEDFMAELYRVLE-AGKIG----IFESPTGTGKSLSLICGALSWL 62
Query: 80 QNCKLKNQ 87
++ + K +
Sbjct: 63 RDFEQKKR 70
>gi|355563978|gb|EHH20478.1| hypothetical protein EGK_03343 [Macaca mulatta]
Length = 906
Score = 150 bits (380), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 171/725 (23%), Positives = 292/725 (40%), Gaps = 183/725 (25%)
Query: 146 IFYASRTHSQISQVISEYKKTAY--RVPMAVLASRKHYCTNKYVRD---KENIDEECKLL 200
I+Y SRTHSQ++Q + E KK+ + V + L SR++ C N+ V+ + I++ C +
Sbjct: 229 IYYCSRTHSQLAQFVHEVKKSPFGKDVRLVSLGSRQNLCVNEDVKSLGSVQLINDRCVDM 288
Query: 201 LGDRNL-------------------GCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVG 241
R+ CP F N H+ G L+ EV DIE L+ +G
Sbjct: 289 QRSRHEKKKGAEEEKPKRRRQEKQAACP-FYN-HEQMG--LLRDEALAEVKDIEQLLALG 344
Query: 242 QVVRGCSYYAARSMADDAQLVFCPYSYIINPVIR-------------------------G 276
+ R C YY +R AQLV PY +++ R G
Sbjct: 345 KEARACPYYGSRLAIPAAQLVVLPYQMLLHAATRQAAGIRLQAQVVIIDEAHNLIDTITG 404
Query: 277 AMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMEL----------------- 319
V++ G+ L + ++ + R + + LK + L
Sbjct: 405 MHSVEVSGSQLCQAHSQLLQYMERYGKRLKAKNLMYLKQILYLLEKFVAVLGGNIKQNPN 464
Query: 320 --------EQVCSVNPMIYQPLIE---------------MTQDLVGWIERRKATLAKRE- 355
++ ++N ++Q I+ +++ L G+ ER A L+ RE
Sbjct: 465 TQSLSQTGTELKTINDFLFQSQIDNINLFKVQRYCEKSMISRKLFGFTERYGAVLSSREQ 524
Query: 356 -----FQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMS 410
FQ F L+ LQ P A ++++ P +
Sbjct: 525 PRLAGFQQF---------LQSLQPRTTEAPAAP------------ADESQASAPRPAS-P 562
Query: 411 VITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFK 470
++ +EG ++LT +++G + Q +L + TL LNPAV F
Sbjct: 563 LMHIEGFLAALTTA-NQDGRVILSRQGSLSQ--------------STLKFLLLNPAVHFA 607
Query: 471 DVAELSLSIILTSGTLSPMNSFSSEL----GVQFGTCLE--APHVIDVDLQVLTSVISTG 524
V + ++++ GT+ P++ F +L GV+ +E HVI D +L VI +G
Sbjct: 608 QVVKECRAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHVIPPD-NILPLVICSG 666
Query: 525 PDNYPLNASYKTADGYKLMEK----LCN------------------------RWRETGQW 556
N PL +++ + ++M++ LCN W + G
Sbjct: 667 ISNQPLEFTFQKRELPQMMDEAGRILCNLCSVVPGGVVCFFPSYEYLRQVHAHWEKGGLL 726
Query: 557 SRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQ 616
RL A+K +F EPK Q E VL Y I C ++R + G L+ + +
Sbjct: 727 GRLAARKKIFQEPKSAHQ--VEQVLLAYSRCIQ---ACG---QERGRVTGALLLSVVGGK 778
Query: 617 ENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYNDTY--RSSKNLLSGNEWYCNQ 674
+ + L C ++VG+PFPNI ++ K Y D R+ G N
Sbjct: 779 MSEGINFSDNLGRC--VVMVGMPFPNIRSPELQEKMAYLDQTLPRAPGQAPPGKNLVENL 836
Query: 675 AFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLK 734
+A+NQ+IGR IRH+ D+ +I+LLD+R+ A + W+R ++ +F ++ ++
Sbjct: 837 CMKAVNQSIGRAIRHQKDFASIVLLDQRYARPPVLAKLPAWIRARVEVKATFGPAIAAVQ 896
Query: 735 SFFRD 739
F R+
Sbjct: 897 KFHRE 901
Score = 54.3 bits (129), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
VG I FP+ PY Q FM + L+ A + G + ESPTGTGKSLSL+C L+W
Sbjct: 8 VGTIHFPFPFTPYSIQEDFMAELYRVLE-AGKIG----IFESPTGTGKSLSLICGALSW 61
>gi|448514499|ref|XP_003867130.1| Chl1 protein [Candida orthopsilosis Co 90-125]
gi|380351468|emb|CCG21692.1| Chl1 protein [Candida orthopsilosis Co 90-125]
Length = 808
Score = 150 bits (380), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 170/666 (25%), Positives = 278/666 (41%), Gaps = 139/666 (20%)
Query: 146 IFYASRTHSQISQVISEYKKTAY---------RVPMAVLASRKHYCTNKYVR-------- 188
IF++SRTHSQ++Q S+ + T + R + SRK C N+ V
Sbjct: 199 IFFSSRTHSQLNQFSSQLRLTTFDASFDDMTERTKYLPVGSRKQLCVNEKVSKLGNQSIN 258
Query: 189 ----DKENIDEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVV 244
D + E C L D++L +F ++ R + DIEDL +G +
Sbjct: 259 DACIDLQKTKEGCTYLTKDQSL-IKEFSDLSLSR------------IRDIEDLATLGTEL 305
Query: 245 RGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGS 304
C YY+ R D A++V PY + R A ++IK AI+I+DEAHNI D S
Sbjct: 306 HACPYYSVRKGLDSAEVVSLPYQLLFQKSAREAWGLNIKDAIVIIDEAHNIIDSITSLYS 365
Query: 305 VDIDEDVLLKLQMEL--------EQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKR-E 355
V I L K+ L +++ S N + L ++ + L ++E + A+ K +
Sbjct: 366 VKITVSQLHKVMQSLKIYLTKFAKKLNSGNRINIVKLTKICKVLTKFMESQSASPGKEVK 425
Query: 356 FQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTES-----ELPHLSGMS 410
+ F TGD NI + L E TK+ K A ES E PH + +
Sbjct: 426 VEDIFLDSTGDL-------VNIHK-----LDEYLTKS-KIAYKIESYMEKNEEPHAASLP 472
Query: 411 VITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFK 470
V+ F + G K+ S N L L+P+V+F
Sbjct: 473 VLFEIAKFLRALTNPRKEG-----------KFYWDKSANE-----FELRYMLLDPSVIFY 516
Query: 471 DVAELSLSIILTSGTLSPMNSFSSELGVQFGTC----LEAPHVI-DVDLQVLTSVISTGP 525
++ + ++L GT+ PM+ F+ L Q H+I + +L+V T V G
Sbjct: 517 EIVTEARCVLLCGGTMEPMSDFTKFLMPQIPDHQIKRFSCQHIIPENNLKVFT-VDKWGS 575
Query: 526 DNYPLNASYKTAD----------------------------GYKLMEKLCNRWRETGQWS 557
+ + SY D Y + K+ W++T +
Sbjct: 576 E---FDFSYNRRDDMLQMDRLGQFILQVCQVVPRGVVVFFGSYSFLYKIVQHWQQTNTYQ 632
Query: 558 RLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQE 617
+++A K +F EP S D VL Y N I+ K A++ G I +
Sbjct: 633 KISALKAVFQEPTNSSNVD--SVLFEYSNVINSQKKGAIL----FSVVGGKLSEGINFSD 686
Query: 618 NANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYNDTY------RSSKNLLSGNEWY 671
N + R ++VG+P+PN ++ K+ + ++ + + S +E+Y
Sbjct: 687 N----------LARAVVMVGLPYPNAFSGEIVAKRTFIESQVIEKGGSAQRAKESSSEYY 736
Query: 672 CNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLE 731
N +A+NQ+IGRCIRH DY I L+D+R+++ R + +SKW++ + D +++
Sbjct: 737 ENLCMKAINQSIGRCIRHANDYALIYLVDKRYKQPRVQNKLSKWVKDRLVISDD---AID 793
Query: 732 GLKSFF 737
G FF
Sbjct: 794 GSAKFF 799
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 35/56 (62%), Gaps = 4/56 (7%)
Query: 28 PYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCK 83
P+ PY Q+ M + T++ +G+ L ESPTGTGK+LS++CST+ W + K
Sbjct: 26 PFTPYDIQVQLMDAIYDTIE----NGYKVGLFESPTGTGKTLSIICSTMTWLREYK 77
>gi|383410919|gb|AFH28673.1| putative ATP-dependent RNA helicase DDX11 isoform 1 [Macaca
mulatta]
Length = 906
Score = 150 bits (380), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 171/725 (23%), Positives = 292/725 (40%), Gaps = 183/725 (25%)
Query: 146 IFYASRTHSQISQVISEYKKTAY--RVPMAVLASRKHYCTNKYVRD---KENIDEECKLL 200
I+Y SRTHSQ++Q + E KK+ + V + L SR++ C N+ V+ + I++ C +
Sbjct: 229 IYYCSRTHSQLAQFVHEVKKSPFGKDVRLVSLGSRQNLCVNEDVKSLGSVQLINDRCVDM 288
Query: 201 LGDRNL-------------------GCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVG 241
R+ CP F N H+ G L+ EV DIE L+ +G
Sbjct: 289 QRSRHEKKKGAEEEKPKRRRQEKQAACP-FYN-HEQMG--LLRDEALAEVKDIEQLLALG 344
Query: 242 QVVRGCSYYAARSMADDAQLVFCPYSYIINPVIR-------------------------G 276
+ R C YY +R AQLV PY +++ R G
Sbjct: 345 KEARACPYYGSRLAIPAAQLVVLPYQMLLHAATRQAAGIRLQAQVVIIDEAHNLIDTITG 404
Query: 277 AMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMEL----------------- 319
V++ G+ L + ++ + R + + LK + L
Sbjct: 405 MHSVEVSGSQLCQAHSQLLQYMERYGKRLKAKNLMYLKQILYLLEKFVAVLGGNIKQNPN 464
Query: 320 --------EQVCSVNPMIYQPLIE---------------MTQDLVGWIERRKATLAKRE- 355
++ ++N ++Q I+ +++ L G+ ER A L+ RE
Sbjct: 465 TQSLSQTGTELKTINDFLFQSQIDNINLFKVQRYCEKSMISRKLFGFTERYGAVLSSREQ 524
Query: 356 -----FQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMS 410
FQ F L+ LQ P A ++++ P +
Sbjct: 525 PRLAGFQQF---------LQSLQPRTTEAPAAP------------ADESQASAPRPAS-P 562
Query: 411 VITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFK 470
++ +EG ++LT +++G + Q +L + TL LNPAV F
Sbjct: 563 LMHIEGFLAALTTA-NQDGRVILSRQGSLSQ--------------STLKFLLLNPAVHFA 607
Query: 471 DVAELSLSIILTSGTLSPMNSFSSEL----GVQFGTCLE--APHVIDVDLQVLTSVISTG 524
V + ++++ GT+ P++ F +L GV+ +E HVI D +L VI +G
Sbjct: 608 QVVKECRAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHVIPPD-NILPLVICSG 666
Query: 525 PDNYPLNASYKTADGYKLMEK----LCN------------------------RWRETGQW 556
N PL +++ + ++M++ LCN W + G
Sbjct: 667 ISNQPLEFTFQKRELPQMMDEAGRILCNLCSVVPGGVVCFFPSYEYLRQVHAHWEKGGLL 726
Query: 557 SRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQ 616
RL A+K +F EPK Q E VL Y I C ++R + G L+ + +
Sbjct: 727 GRLAARKKIFQEPKSAHQ--VEQVLLAYSRCIQ---ACG---QERGRVTGALLLSVVGGK 778
Query: 617 ENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYNDTY--RSSKNLLSGNEWYCNQ 674
+ + L C ++VG+PFPNI ++ K Y D R+ G N
Sbjct: 779 MSEGINFSDNLGRC--VVMVGMPFPNIRSPELQEKMAYLDQTLPRAPGQAPPGKNLVENL 836
Query: 675 AFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLK 734
+A+NQ+IGR IRH+ D+ +I+LLD+R+ A + W+R ++ +F ++ ++
Sbjct: 837 CMKAVNQSIGRAIRHQKDFASIVLLDQRYARPPVLAKLPAWIRARVEVKATFGPAIAAVQ 896
Query: 735 SFFRD 739
F R+
Sbjct: 897 KFHRE 901
Score = 54.3 bits (129), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 40/68 (58%), Gaps = 5/68 (7%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
VG I FP+ PY Q FM + L+ A + G + ESPTGTGKSLSL+C L+W
Sbjct: 8 VGTIHFPFPFTPYSIQEDFMAELYRVLE-AGKIG----IFESPTGTGKSLSLICGALSWL 62
Query: 80 QNCKLKNQ 87
++ + K +
Sbjct: 63 RDFEQKKR 70
>gi|336466792|gb|EGO54956.1| hypothetical protein NEUTE1DRAFT_147626 [Neurospora tetrasperma FGSC
2508]
gi|350288617|gb|EGZ69853.1| DNA repair helicase [Neurospora tetrasperma FGSC 2509]
Length = 1068
Score = 150 bits (380), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 176/749 (23%), Positives = 297/749 (39%), Gaps = 166/749 (22%)
Query: 146 IFYASRTHSQISQVISEYKKTAYRVPMAV------------------LASRKHYCTNKYV 187
IFY SRTHSQ++Q I E ++ + P +V L+SR+ C N V
Sbjct: 336 IFYTSRTHSQLTQFIQELRRPEF--PASVPTPNPQEEPAKEIVKQIPLSSRQKLCINPTV 393
Query: 188 RDKEN---IDEECKLLLGDRNLG---CPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVG 241
I+E C+ L + CP N ++ + + DIEDL G
Sbjct: 394 NKLGTLAAINERCQSLQQSKTPKEQRCPYLPNAANLKATHEFRDTALATLPDIEDLYQTG 453
Query: 242 QVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARD 301
+ ++ C YYA+R+ A+++ PY ++ R A+ + ++G I+I+DEAHNI D +
Sbjct: 454 KQLQICPYYASRAAIPGAEVITLPYPLLLQKSAREALGIKLEGNIVIIDEAHNIMDAVSN 513
Query: 302 AGSVDIDEDVLLKLQMEL--------EQVCSVNPMIYQPLIEMTQDLVGWIERR--KATL 351
+ +I L + ++ L +++ N ++ L + + L +I+ + KA L
Sbjct: 514 VHAAEIKYTDLKRAKLSLGMYYQRFHQKLTGENKVMVAQLQRVVEALGVYIKTKLDKAAL 573
Query: 352 AKREFQH--------FFSCWTGD-----KALRELQEANISRQCFPILLECATKAIKEATD 398
+ Q D K +R +QE+ ++ + + C +E D
Sbjct: 574 GHKADQEGIVLDTSLLLKTGGADQINLYKLIRYVQESKLAFKIEGYISYCE----EEGRD 629
Query: 399 TESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHT- 457
T+ E + + +L F + + S+ ++ +K P G
Sbjct: 630 TDDEEAETEIKARQGRPPVLHTLCSFLTALTNLSSEGRIFYEKI-----PPPRGELQDMK 684
Query: 458 LSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFG----TCLEAPHVIDVD 513
LS L+P F +AE + ++IL GT+SP + + L T L HVI D
Sbjct: 685 LSYMLLSPTHAFSSIAESARAVILAGGTMSPFEDYKAHLFPDVPPEKITTLSCGHVIPPD 744
Query: 514 LQVLTSVISTGPD-------------------NYP----------LNASYKTADG----- 539
+ ++ S P+ + P LN DG
Sbjct: 745 NLCVWTLGSIAPNPKVDTGIGEDCFDFTFAKRSNPNMINRLGLVLLNLCSVVPDGVVAFF 804
Query: 540 --YKLMEKLCNRWRETGQ-------WSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQ 590
Y +E++ W+ Q W RL +KK LF++ K S E L+ Y + I
Sbjct: 805 PSYGYLEEVIGVWKTHEQAMGPKTIWERLESKKALFIDSKTESSEQ---TLQKYSDVIHS 861
Query: 591 GSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNIND----- 645
+ RVK G L+ I + + + L C IVVG+P+PN +
Sbjct: 862 EVRPLSPAGSRVK--GAMLLSVIGGKMSEGINFSDRLGRC--VIVVGMPYPNPHSPEWLA 917
Query: 646 ----IQVSLKKKY----------------------NDTYRSSKNLLSGN----------- 668
++ + K+Y N T+ S+ S N
Sbjct: 918 RREYLEANFIKRYTASQQTSTATAPLPAPVIPPPSNTTHHSTNPSSSRNKDKHKPPNVRK 977
Query: 669 -------EWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIK 721
++Y N RA+NQ+IGR IRH+ DY AI+L+D RF++E RA + W+R+
Sbjct: 978 LAARDSHQFYENATLRAVNQSIGRAIRHQNDYAAIVLIDNRFEKEHVRAKLPGWIREG-- 1035
Query: 722 QYDSFDASLEGLKSFFRDVKGWVGK-KMF 749
+D + + ++G +G+ MF
Sbjct: 1036 -WDETQRQAKEDGKVLKGLQGMMGRVNMF 1063
Score = 48.1 bits (113), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 53 GHCH-ALLESPTGTGKSLSLLCSTLAWQQNCKLKNQLANISHSKPDTEAVTDP 104
GH AL ESPTGTGKSLSL+C +L W +N K A I + EA +P
Sbjct: 146 GHAQIALFESPTGTGKSLSLICGSLTWLRNHKRLQFEAEIEKIQQQMEASGEP 198
>gi|312091190|ref|XP_003146892.1| hypothetical protein LOAG_11323 [Loa loa]
Length = 438
Score = 150 bits (380), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 107/300 (35%), Positives = 156/300 (52%), Gaps = 57/300 (19%)
Query: 15 LNAYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCS 74
++A +G VEFP++PY Q+ FM +V+ L Q +A LESPTGTGK+L LLC+
Sbjct: 1 MHAVQIGRSTVEFPFEPYECQIKFMEKVVEALWTGQ-----NAALESPTGTGKTLCLLCA 55
Query: 75 TLAWQQNCKLK-NQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAM 133
+A+ ++ K + +Q+ +I K T+P A+
Sbjct: 56 AIAFLKDYKSRISQMDSIMKYK----------------------VTVP----------AL 83
Query: 134 NNKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYR-VPMAVLASRKHYCTNKYVRDKEN 192
+ N P I YASRTHSQ++QVISE KT Y+ + LASR C N V KEN
Sbjct: 84 LSHN------PKILYASRTHSQLAQVISELNKTTYKDIKTVTLASRDILCINDKVM-KEN 136
Query: 193 IDEECKLLLGDRNL----GCPQFKNVHKVRGHPS---LQKGGCHEVHDIEDLVNVGQVVR 245
L+ RNL CP + + K PS L G V DIE+++N+ Q R
Sbjct: 137 SSHVKSLMC--RNLISKHQCPFYNSYEK--ADPSTLDLLYNGNGLVPDIEEVINISQKHR 192
Query: 246 GCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSV 305
C Y+ R++ ++A L+ PY+YI++P +R + +KG I+I DEAHN+E I ++ SV
Sbjct: 193 YCPYFRNRTVYENADLILLPYNYIVDPSLRHKHNIQLKGNIVIFDEAHNLESICEESTSV 252
>gi|303289303|ref|XP_003063939.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454255|gb|EEH51561.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 770
Score = 150 bits (380), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 182/795 (22%), Positives = 312/795 (39%), Gaps = 169/795 (21%)
Query: 57 ALLESPTGTGKSLSLLCSTLAWQQNCKLKNQLANISHSKPDTEAVT-----DPLANGGGF 111
+ ESPTGTGK+LS LC+ L W + + + + ++ D A D
Sbjct: 14 GIFESPTGTGKTLSTLCAALQWLE-VRARGEAEFLADEWRDDAAGNPNPDDDVFRGARAD 72
Query: 112 IPESQPSTIPPSTN--------GQTAQVAMNNKNVKKKMTPT-IFYASRTHSQISQVISE 162
S P+ N G A A + + + PT + + SRTHSQ++QV+ E
Sbjct: 73 DSSSDDDGDDPNGNTKRRGKRNGAGAGPADGDSSDEDAAAPTQVIFCSRTHSQLTQVVGE 132
Query: 163 YKKTAYRVPMA-----VLASRKHYCTNKYVRD----KENIDEECKLLLGD---------- 203
T++ P +ASR C N VR ++E C L LG
Sbjct: 133 LNSTSFGGPEGTVNAIAIASRAQLCVNPEVRSVGVSNARLNERC-LELGKPTTTKSSSSA 191
Query: 204 -------------RNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYY 250
GCP KN + + DIEDL +G R C YY
Sbjct: 192 TATDPATGKKKKKTAGGCPFLKNRRAAVAELADAA--LSQPMDIEDLAALGVRRRACPYY 249
Query: 251 AARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDA-GSVDIDE 309
AAR A LVF PY+ +++ R ++ +++KGA+++ DEAHN+++ A G+V
Sbjct: 250 AARRALPRADLVFAPYASLLHAETRESLGINLKGAVVVFDEAHNLQEAVHGAYGAV---- 305
Query: 310 DVLLKLQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKAL 369
+ Q+ +V M LV ++ER LA +H + + K++
Sbjct: 306 -------ITGSQIKAVKAM-----------LVAYVERFHKRLAAGNLRHLRTLISLAKSM 347
Query: 370 -RELQEANISRQCFPILLECATKAIKEATDT---------------------------ES 401
+ L + + + + ++ + ++ + ES
Sbjct: 348 EKALDPSMMHHNARNVGVTGSSSGARTSSGSEIKCLNDFLFGVGADNVNVFALTKYLRES 407
Query: 402 ELPH-LSGMSVITLE--------GLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPG- 451
++ H ++G + E G +L F S S +D ++ +++ + G
Sbjct: 408 KIAHKIAGYAESRNESTKRPPRVGAVHALAAFVSALASSDADGRVLVERAGAVGGADQGA 467
Query: 452 --GNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSEL-------GVQFG- 501
G L L+ A FK V + S +++L GTLSP++ + L G +
Sbjct: 468 DQGADGGRLKFVLLDAAARFKSVVDESRAVVLVGGTLSPIDELARALFPSAAPVGSKIAS 527
Query: 502 ----TCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTADGYKLMEKLCNRWRETGQWS 557
+ L HV+ + +L + GP + S+ D + ++++L
Sbjct: 528 ETTLSSLSLGHVVPKE-SLLPIAVGKGPGGVRFDFSFGKRDAFDVVDELGRLL------- 579
Query: 558 RLNAKKPLFVEPKGGSQ--EDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIES 615
+NA V P G F+ Y + G+ + + K V RE + I +
Sbjct: 580 -INASA---VTPGGVVVFFPSFKYADDVYQRWVRTGAVGQLAKHKAVFREPRKARSPIHT 635
Query: 616 QENAN-------------KKGASFLAVCRGK---------------IVVGIPFPNINDIQ 647
+ GA L VC GK I+VG+P+ N +D +
Sbjct: 636 GSRTTPSACNPKGGGGGGQTGAVMLCVCGGKLSEGINFKDDLGRLVIMVGLPYANPDDPE 695
Query: 648 VSLKKKYNDTYRSSK-NLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERF-QE 705
+S + K+ D ++ ++ G +Y R++NQ++GR IRH DY AI+ D R+
Sbjct: 696 LSARMKHLDAMDAATLDVPRGRAYYEALCMRSVNQSVGRAIRHARDYAAILFADHRYVNP 755
Query: 706 ERNRAHISKWLRKSI 720
+ A + W+R+S+
Sbjct: 756 DGASAQLPGWIRQSM 770
>gi|297261772|ref|XP_001114510.2| PREDICTED: putative ATP-dependent RNA helicase DDX11-like
protein-like isoform 4 [Macaca mulatta]
Length = 910
Score = 150 bits (379), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 171/725 (23%), Positives = 292/725 (40%), Gaps = 183/725 (25%)
Query: 146 IFYASRTHSQISQVISEYKKTAY--RVPMAVLASRKHYCTNKYVRD---KENIDEECKLL 200
I+Y SRTHSQ++Q + E KK+ + V + L SR++ C N+ V+ + I++ C +
Sbjct: 233 IYYCSRTHSQLAQFVHEVKKSPFGKDVRLVSLGSRQNLCVNEDVKSLGSVQLINDRCVDM 292
Query: 201 LGDRNL-------------------GCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVG 241
R+ CP F N H+ G L+ EV DIE L+ +G
Sbjct: 293 QRSRHEKKKGAEEEKPKRRRQEKQAACP-FYN-HEQMG--LLRDEALAEVKDIEQLLALG 348
Query: 242 QVVRGCSYYAARSMADDAQLVFCPYSYIINPVIR-------------------------G 276
+ R C YY +R AQLV PY +++ R G
Sbjct: 349 KEARACPYYGSRLAIPAAQLVVLPYQMLLHAATRQAAGIRLQAQVVIIDEAHNLIDTITG 408
Query: 277 AMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMEL----------------- 319
V++ G+ L + ++ + R + + LK + L
Sbjct: 409 MHSVEVSGSQLCQAHSQLLQYMERYGKRLKAKNLMYLKQILYLLEKFVAVLGGNIKQNPN 468
Query: 320 --------EQVCSVNPMIYQPLIE---------------MTQDLVGWIERRKATLAKRE- 355
++ ++N ++Q I+ +++ L G+ ER A L+ RE
Sbjct: 469 TQSLSQTGTELKTINDFLFQSQIDNINLFKVQRYCEKSMISRKLFGFTERYGAVLSSREQ 528
Query: 356 -----FQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMS 410
FQ F L+ LQ P A ++++ P +
Sbjct: 529 PRLAGFQQF---------LQSLQPRTTEAPAAP------------ADESQASAPRPAS-P 566
Query: 411 VITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFK 470
++ +EG ++LT +++G + Q +L + TL LNPAV F
Sbjct: 567 LMHIEGFLAALTTA-NQDGRVILSRQGSLSQ--------------STLKFLLLNPAVHFG 611
Query: 471 DVAELSLSIILTSGTLSPMNSFSSEL----GVQFGTCLE--APHVIDVDLQVLTSVISTG 524
V + ++++ GT+ P++ F +L GV+ +E HVI D +L VI +G
Sbjct: 612 QVVKECRAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHVIPPD-NILPLVICSG 670
Query: 525 PDNYPLNASYKTADGYKLMEK----LCN------------------------RWRETGQW 556
N PL +++ + ++M++ LCN W + G
Sbjct: 671 ISNQPLEFTFQKRELPQMMDEAGRILCNLCSVVPGGVVCFFPSYEYLRQVHAHWEKGGLL 730
Query: 557 SRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQ 616
RL A+K +F EPK Q E VL Y I C ++R + G L+ + +
Sbjct: 731 GRLAARKKIFQEPKSAHQ--VEQVLLAYSRCIQ---ACG---QERGRVTGALLLSVVGGK 782
Query: 617 ENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYNDTY--RSSKNLLSGNEWYCNQ 674
+ + L C ++VG+PFPNI ++ K Y D R+ G N
Sbjct: 783 MSEGINFSDNLGRC--VVMVGMPFPNIRSPELQEKMAYLDQTLPRAPGQAPPGKNLVENL 840
Query: 675 AFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLK 734
+A+NQ+IGR IRH+ D+ +I+LLD+R+ A + W+R ++ +F ++ ++
Sbjct: 841 CMKAVNQSIGRAIRHQKDFASIVLLDQRYARPPVLAKLPAWIRARVEVKATFGPAIAAVQ 900
Query: 735 SFFRD 739
F R+
Sbjct: 901 KFHRE 905
Score = 54.3 bits (129), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 40/68 (58%), Gaps = 5/68 (7%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
VG I FP+ PY Q FM + L+ A + G + ESPTGTGKSLSL+C L+W
Sbjct: 12 VGTIHFPFPFTPYSIQEDFMAELYRVLE-AGKIG----IFESPTGTGKSLSLICGALSWL 66
Query: 80 QNCKLKNQ 87
++ + K +
Sbjct: 67 RDFEQKKR 74
>gi|224059074|ref|XP_002299703.1| predicted protein [Populus trichocarpa]
gi|222846961|gb|EEE84508.1| predicted protein [Populus trichocarpa]
Length = 918
Score = 150 bits (379), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 162/703 (23%), Positives = 289/703 (41%), Gaps = 171/703 (24%)
Query: 146 IFYASRTHSQISQVISEYKKTAY--RVPMAVLASRKHYCTNKYV---RDKENIDEECKLL 200
I++ SRTHSQ+SQ I E +KT + + + L SRK++C N+ V ++E C L
Sbjct: 211 IYFCSRTHSQLSQFIKELRKTLFSNEINVVCLGSRKNFCINEEVLKLGSSVRVNERCLEL 270
Query: 201 LGDRNLGCPQFKNVH---KVR------GHPSLQKGGC----------HEVHDIEDLVNVG 241
++ + KN ++R G P L+K H DIEDLV +G
Sbjct: 271 QKNKKNEVSKIKNFSAEGRIRRTKASSGCPMLRKHKLQKEFRNETSQHGALDIEDLVRIG 330
Query: 242 QVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARD 301
+ + C YY +RSM A LV PY +++ R ++ +++K +I+++DEAHN+ D
Sbjct: 331 RSIGTCPYYGSRSMVPAADLVVLPYQSLLSKSSRESLGLNLKNSIIVIDEAHNLADSLIS 390
Query: 302 AGSVDIDEDVLLKLQMELEQVCSV--------NPMIYQPLIEMTQDLVGWIERRK----- 348
I L + +E+ + N Q L+ +T+ + ++ +K
Sbjct: 391 MYDAKITSSQLESVHSHIEKYFTRFRNLLGPGNRRYIQTLMVLTRAFLQTLDNKKDLSNV 450
Query: 349 -----------------ATLAKREFQHFFSCWTGD----KALRELQEANISRQCFPILLE 387
++A +F FS + K L+ ++E+N+ + +
Sbjct: 451 NNYQAEEIAADKKAVCDTSIAINDF--LFSLNIDNINLVKLLQYIKESNLVHKVSGYGEK 508
Query: 388 CATKAIKEATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDS 447
A+ A + E G ++ + L L + +G D ++ + K S
Sbjct: 509 VASLQEGLALNRNGEFGE-EGSTLSSFRALVDMLMSLTNNDG----DGRMIISKMRSTCS 563
Query: 448 KNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSEL-------GVQF 500
GG + + L +F ++ + + ++IL GTL P+ L + F
Sbjct: 564 GLQGGFLKYVM----LTGEKIFSEIVDEAHAVILAGGTLQPIEETRERLFPWLPPNQLHF 619
Query: 501 GTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTADGYKLMEK----LCN-------- 548
+C H++ + +L +S GP + SY + ++E+ LCN
Sbjct: 620 FSC---SHIVPPE-SILPIAVSRGPSGQSFDFSYSSRSSLVMIEELGLLLCNLVAFVPEG 675
Query: 549 ----------------RWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGS 592
W+++G R+ KK +F EP+ S D E++LK Y +I
Sbjct: 676 IVVFFSSFEYEGQVYDSWKKSGILERIMRKKRIFREPR--SNSDVELILKEYKETI---- 729
Query: 593 KCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKI---------------VVG 637
+ L++ ++ GA LAV GKI +VG
Sbjct: 730 ---------------DGLSSGTKEDGVRHNGAVLLAVVGGKISEGINFSDGMGRCIVMVG 774
Query: 638 IPFPNINDIQVSLKKK----------------------YNDTYRSSKNLL-----SGNEW 670
+P+P+ +D+++ + K YN +++ ++L G E+
Sbjct: 775 LPYPSPSDMELMERVKYIESLGEPNCGKRPEISVGEHYYNGDVQTAFSILRSCRRRGKEY 834
Query: 671 YCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHIS 713
Y N +A+NQ+IGR IRH DY AI+L+D R+ + ++ S
Sbjct: 835 YENLCMKAVNQSIGRAIRHINDYAAILLVDMRYASDSSKTSFS 877
Score = 58.2 bits (139), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 48/81 (59%), Gaps = 9/81 (11%)
Query: 27 FPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW----QQNC 82
FPY+PY Q+ FM + +L++ ++LESPTGTGK+LS++CS L W +Q
Sbjct: 6 FPYKPYSIQIDFMKALYHSLNQGGV-----SILESPTGTGKTLSIICSALQWVYDRRQQD 60
Query: 83 KLKNQLANISHSKPDTEAVTD 103
K K Q+ + HS D + +D
Sbjct: 61 KSKVQVQSPHHSTDDAHSGSD 81
>gi|393904464|gb|EFO17178.2| hypothetical protein LOAG_11323 [Loa loa]
Length = 449
Score = 150 bits (379), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 107/300 (35%), Positives = 156/300 (52%), Gaps = 57/300 (19%)
Query: 15 LNAYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCS 74
++A +G VEFP++PY Q+ FM +V+ L Q +A LESPTGTGK+L LLC+
Sbjct: 1 MHAVQIGRSTVEFPFEPYECQIKFMEKVVEALWTGQ-----NAALESPTGTGKTLCLLCA 55
Query: 75 TLAWQQNCKLK-NQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAM 133
+A+ ++ K + +Q+ +I K T+P A+
Sbjct: 56 AIAFLKDYKSRISQMDSIMKYK----------------------VTVP----------AL 83
Query: 134 NNKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYR-VPMAVLASRKHYCTNKYVRDKEN 192
+ N P I YASRTHSQ++QVISE KT Y+ + LASR C N V KEN
Sbjct: 84 LSHN------PKILYASRTHSQLAQVISELNKTTYKDIKTVTLASRDILCINDKVM-KEN 136
Query: 193 IDEECKLLLGDRNL----GCPQFKNVHKVRGHPS---LQKGGCHEVHDIEDLVNVGQVVR 245
L+ RNL CP + + K PS L G V DIE+++N+ Q R
Sbjct: 137 SSHVKSLMC--RNLISKHQCPFYNSYEK--ADPSTLDLLYNGNGLVPDIEEVINISQKHR 192
Query: 246 GCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSV 305
C Y+ R++ ++A L+ PY+YI++P +R + +KG I+I DEAHN+E I ++ SV
Sbjct: 193 YCPYFRNRTVYENADLILLPYNYIVDPSLRHKHNIQLKGNIVIFDEAHNLESICEESTSV 252
>gi|154419164|ref|XP_001582599.1| helicase [Trichomonas vaginalis G3]
gi|121916835|gb|EAY21613.1| helicase, putative [Trichomonas vaginalis G3]
Length = 1428
Score = 150 bits (378), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 101/351 (28%), Positives = 161/351 (45%), Gaps = 78/351 (22%)
Query: 17 AYHVGGIQVEFPYQ-PYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCST 75
A + GI V FPY+ PY SQ V M + I + + +AL+ESPTGTGK+L+LL ++
Sbjct: 4 AQKIMGIDVLFPYEKPYKSQEVVMEKTIKGIA-----SNHNALIESPTGTGKTLALLSAS 58
Query: 76 LAWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNN 135
LA+Q H P +++
Sbjct: 59 LAYQ-------------HVDPKLDSI---------------------------------- 71
Query: 136 KNVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDE 195
Y SRTH+Q+ QVISEYK+ Y+V M VLASRK C N VR+ N D
Sbjct: 72 -----------IYTSRTHTQLKQVISEYKRLPYKVQMTVLASRKRLCINDEVRESPNTDI 120
Query: 196 ECKLLLGDRNLG------CPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSY 249
C +L + + CP F + + SL G D+E+L G+ C Y
Sbjct: 121 NCYILTHPKTVNGVTQEQCPYFVHAQVEKAPRSLTIEGDLPKFDLEELFQYGKRHAACPY 180
Query: 250 YAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDE 309
Y A+++ A+++F PY+Y ++ + + +ILI DEAHNIE+ AR+ + +
Sbjct: 181 YLAKNLKSSAKIIFSPYNYYLDTIFSSEF---LTNSILIFDEAHNIENAARNIATFKMPF 237
Query: 310 DVLLKLQMELEQVCS-----VNPMIYQPLIEMTQDLVGWIERRKATLAKRE 355
++L ++ + +Q+ IY +I++T + ++ ++ KR+
Sbjct: 238 ELLTRINISAKQIAERKSDRFGVKIYNNMIKLTNSFLEFMLQQWEYYLKRK 288
Score = 114 bits (285), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 145/338 (42%), Gaps = 64/338 (18%)
Query: 450 PGGNW-THTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPH 508
PG N + + CL+P+VVF+ + + SIIL SGTLSP SF SELG+ F PH
Sbjct: 366 PGENINASSFEISCLDPSVVFEQAGKSAKSIILASGTLSPQQSFESELGLPFPIKASVPH 425
Query: 509 VIDVDLQVLTSVISTGPDNYP--------------------LNASYKTADG--------Y 540
VI D L ++ T + + K DG Y
Sbjct: 426 VISPDQVKLYQIVGTNGRRMTSLFDEMEKRGKQILLDFGRGVLSIVKNTDGGVLVFMPSY 485
Query: 541 KLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKK 600
+ EK+ WR+ G ++ ++ +F E +G +D + V+ Y N + A+ +
Sbjct: 486 AVREKMMKVWRKAGIAEQIYKERWIFNEEQG---KDMKKVISDYKNCKGRAVLFAICK-- 540
Query: 601 RVKREGNNDLNTIESQENANKKGASFLAV-CRGKIVVGIPFPNINDIQVSLKKKYNDTYR 659
+ +G F R + GIP+P + ++ K+ +N+ R
Sbjct: 541 -----------------GSIGEGIDFSDYHARAVVCFGIPYPPSKEQEIIQKRLFNNKNR 583
Query: 660 SSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKS 719
N G WY Q R L Q +GR IRH DYGA+ + ++R +R+ W+ ++
Sbjct: 584 PKYN---GKLWYNGQGMRTLFQVLGRVIRHSQDYGALFVFEDRLHPQRD---FPSWMTRN 637
Query: 720 IKQ-YDSFDASLEGLKSFFRDVKGWVGKKMFNGLENSD 756
I+Q Y + D ++ F + +K MF+G + D
Sbjct: 638 IEQTYKTADEAINDFILFQQKMKS-----MFDGKQEID 670
>gi|164429296|ref|XP_001728521.1| hypothetical protein NCU11409 [Neurospora crassa OR74A]
gi|206557740|sp|A7UXD4.1|CHL1_NEUCR RecName: Full=ATP-dependent RNA helicase chl-1; AltName:
Full=Chromosome loss protein 1
gi|157073424|gb|EDO65430.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 1073
Score = 150 bits (378), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 176/749 (23%), Positives = 299/749 (39%), Gaps = 173/749 (23%)
Query: 146 IFYASRTHSQISQVISEYKKTAYRVPMAV------------------LASRKHYCTNKYV 187
IFY SRTHSQ++Q I E ++ + P +V L+SR+ C N V
Sbjct: 336 IFYTSRTHSQLTQFIQELRRPEF--PASVPTPNPQEKPAKEIVKQIPLSSRQKLCINPTV 393
Query: 188 RDKEN---IDEECKLLL---GDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVG 241
I+E C+ L ++ CP N ++ + + DIEDL G
Sbjct: 394 NKLGTLAAINERCQSLQQPKTPKDQRCPYLPNAANLKATHEFRDTALATLPDIEDLYQTG 453
Query: 242 QVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARD 301
+ ++ C YYA+R+ A+++ PY ++ R A+ + ++G I+I+DEAHNI D +
Sbjct: 454 KQLQICPYYASRAAIPGAEVITLPYPLLLQKSAREALGIRLEGNIVIIDEAHNIMDAVSN 513
Query: 302 AGSVDIDEDVLLKLQMEL--------EQVCSVNPMIYQPLIEMTQDLVGWIERR--KATL 351
+ +I L + ++ L +++ N ++ L + + L +++ + KA L
Sbjct: 514 VHAAEIKYTDLKRAKLSLGMYYQRFHQKLTGENKVMVAQLQRVVEALGVYLKTKLDKAAL 573
Query: 352 AKREFQH--------FFSCWTGD-----KALRELQEANISRQCFPILLECATKAIKEATD 398
+ Q D K +R +QE+ ++ + + C +E D
Sbjct: 574 GLKADQEGIVLDTSLLLKTGGADQINLYKLIRYVQESKLAFKIEGYISYCE----EEGRD 629
Query: 399 TESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHT- 457
T+ E + + +L F + + S+ ++ +K P G
Sbjct: 630 TDDEEAETEIKARQGRPPVLHTLCSFLTALTNLSSEGRIFYEKI-----PPPRGELQDMK 684
Query: 458 LSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFG----TCLEAPHVIDVD 513
LS L+P F +AE + ++IL GT+SP + + L T L HVI D
Sbjct: 685 LSYMLLSPTHAFSSIAESARAVILAGGTMSPFEDYKAHLFPDVPPEKITTLSCGHVIPPD 744
Query: 514 LQVLTSVISTGPD-------------------NYP----------LNASYKTADG----- 539
+ ++ S P+ + P LN DG
Sbjct: 745 NLCVWTLGSIAPNPKVDTGIGEDCFDFTFAKRSNPNMINRLGLVLLNLCSVVPDGVVAFF 804
Query: 540 --YKLMEKLCNRWRETGQ-------WSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQ 590
Y +E++ W+ Q W RL +KK LF++ K S E L+ Y + I
Sbjct: 805 PSYGYLEEVIGVWKTHEQAMGPKTIWERLESKKALFIDSKTESSEQ---TLQKYSDVIHS 861
Query: 591 GSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNIND----- 645
+ RVK G L+ I + + + L C +VVG+P+PN +
Sbjct: 862 EVRPLSPAGSRVK--GAMLLSVIGGKMSEGINFSDRLGRC--VVVVGMPYPNPHSPEWLA 917
Query: 646 ----IQVSLKKKY----------------------NDTYRSSKNLLSGN----------- 668
++ + K+Y N T+ S+ S N
Sbjct: 918 RREYLEANFIKRYTASQQTSTATAPLPAPVIPPPSNTTHYSTNPSSSRNKDKHKPANVRK 977
Query: 669 -------EWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLR---- 717
++Y N RA+NQ+IGR IRH+ DY AI+L+D RF++E RA + W+R
Sbjct: 978 LAARDSHQFYENATLRAVNQSIGRAIRHQNDYAAIVLIDNRFEKEHVRAKLPGWIREGWD 1037
Query: 718 KSIKQYDSFDASLEGLKS-------FFRD 739
++ +Q +L+GL+ FFR+
Sbjct: 1038 ETQRQAKEDGKALKGLQGMMGRVNMFFRE 1066
Score = 46.2 bits (108), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 53 GHCH-ALLESPTGTGKSLSLLCSTLAWQQNCKLKNQLANISHSKPDTEAVTDP 104
GH AL ESPTGTGKSLSL+C +L W +N K + I + EA +P
Sbjct: 146 GHAQIALFESPTGTGKSLSLICGSLTWLRNHKRLQFDSEIEKIQQQMEASGEP 198
>gi|299743627|ref|XP_001835886.2| CHL1 helicase [Coprinopsis cinerea okayama7#130]
gi|298405743|gb|EAU85951.2| CHL1 helicase [Coprinopsis cinerea okayama7#130]
Length = 905
Score = 150 bits (378), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 168/707 (23%), Positives = 278/707 (39%), Gaps = 182/707 (25%)
Query: 146 IFYASRTHSQISQVISEYKK---------------------------------------- 165
I+YASRTHSQ+SQV+ E ++
Sbjct: 246 IYYASRTHSQLSQVLPELRRLKLKQQISVANHCTSAASGNQASTGRKRCAEEHEDTDEEV 305
Query: 166 TAYRVPMAVLASRKHYCTNKYVRDK-ENIDEECKLLLGDRNLGCPQFKNVHKVRGHPSLQ 224
R+ + L SRK C N +R+K ++DE C+ LLG R + Q
Sbjct: 306 AGKRIRIVALGSRKQLCINDELREKSSDLDEACRELLGGR-----------------ASQ 348
Query: 225 KGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKG 284
K DIEDL G++ C Y+ +R A+LV PY+ ++ R A+ +D+KG
Sbjct: 349 K-------DIEDLAEAGRLANTCPYFGSRKAIPQAELVTLPYNLLLQKSAREALGIDLKG 401
Query: 285 AILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQVCSVNPMIYQPLIEMTQDLVGWI 344
I+I+DEAHN+ LL L S + + Y L Q + ++
Sbjct: 402 QIVIIDEAHNL-------------IPTLLSL--------STHRLSYGTLAISLQQVAEYV 440
Query: 345 ERRKATLAKREFQHFFSCWTGDKALRE------------LQEANISRQCFPILLECATKA 392
R K L+ +AL++ L+++ I+R+ + + A K
Sbjct: 441 RRFKTRLSPANMLQLKRLVIFLEALKKAAGINLLEVEAYLKKSKIARKISGYVDKQAEK- 499
Query: 393 IKEATDTESELPHLSGMSVITLEGLFSSLTYF--FSRNGSHVSDYQLALQKYIKRDSKNP 450
D+ S +P + +G L F ++ S+V+D + +
Sbjct: 500 -----DSASSVPRRK-----SRKGAIPPLHVVEDFMKSLSNVNDDGRVTFTLV----ETA 545
Query: 451 GGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFG----TCLEA 506
G T L LNPA F ++ E + +IIL GT+SP++ +++L +
Sbjct: 546 GQEATVELKYQLLNPAPNFLEIVEDARAIILAGGTMSPISDVTNQLFYSVPRERVSNFSC 605
Query: 507 PHVIDVD-LQVLTSVISTGPDNYPLN----------------------ASYKTAD----- 538
HVI D L+ L + GP + L+ AS A
Sbjct: 606 GHVIPEDNLKPLA--VMKGPKGHDLDFRANRQSDPTVLAELGQIIFNYASITPAGMIVFF 663
Query: 539 -GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVV 597
Y + W ++ R KK +F EP+ + E VL+ Y + C ++
Sbjct: 664 PSYSFLNTAKATWGKSKVLDRFGTKKAVFFEPEESNA--VESVLQEYSKA---AQVCILI 718
Query: 598 RKKRVKREGNNDLNTIESQENANKKGASFL----------------AVCRGKIVVGIPFP 641
+R++ + +S ++++KG L + R I+VG+PF
Sbjct: 719 AHQRLQYKPAGLFYREQSVPSSDRKGGGLLFAVIGAKLSEGLNFSDDLARTVIIVGLPFA 778
Query: 642 NINDIQVSLKKKY-----------NDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHR 690
N+ ++ + KY D + + + E Y N A+NQ+IGR IRHR
Sbjct: 779 NLGSPELRERMKYVKMLEEKRQQNGDFSKPAGQKDAAAELYENICMNAVNQSIGRAIRHR 838
Query: 691 FDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFF 737
D+ +++LLD R+ R + KW+ + D+F S++ L SFF
Sbjct: 839 NDWASLLLLDRRYASATIRNKLPKWIGNRLVVTDTFGQSIKELASFF 885
Score = 47.8 bits (112), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 33/53 (62%), Gaps = 6/53 (11%)
Query: 27 FPYQP-YGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
FPY P Y Q+ M V +++ H ++ESPTGTGK+L+LLCS+L W
Sbjct: 60 FPYDPPYAIQVDLMRHVYEAIEKK----HV-TIVESPTGTGKTLTLLCSSLTW 107
>gi|310791719|gb|EFQ27246.1| DNA repair helicase [Glomerella graminicola M1.001]
Length = 897
Score = 149 bits (376), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 174/729 (23%), Positives = 288/729 (39%), Gaps = 182/729 (24%)
Query: 146 IFYASRTHSQISQVISEYKKTAY--RVPMAV-------------------LASRKHYCTN 184
I+Y SRTHSQ++Q I E ++ + +P +V L+SR+ C N
Sbjct: 208 IYYTSRTHSQLTQFIHELRRPTFPSSIPPSVVQGRSKGEDAAKEPVKHLPLSSRQKLCIN 267
Query: 185 KYVR---DKENIDEECKLLLGDRNLG-CPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNV 240
V I++ C L ++ CP V + + DIEDL ++
Sbjct: 268 PSVARLGTLSAINDRCSELQKPKSKDKCPYTLKEDNVAQTHQFRDTAHATLPDIEDLYHL 327
Query: 241 GQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIAR 300
G+ + C YYA+R+ A+++ PY ++ R A+ + ++G ++I+DEAHNI D
Sbjct: 328 GKKLSICPYYASRAAVAGAEIITLPYPLLLQKNARDALGIKLEGNVVIVDEAHNIMDAVA 387
Query: 301 DAGSVDIDEDVLLKLQMEL--------EQVCSVNPMIYQPLIEMTQDLVGWIE---RRKA 349
+ + +I L + + L +++ N ++ + + + L W++ + K+
Sbjct: 388 NVYASEIKLSELRQARQMLGVYVRRFGKKLKGENRVMVGQVGRVIEGLSEWMDGQSKLKS 447
Query: 350 TLAKREFQHFFSCWTGDKA--LRELQEANISRQCFPI------LLECATKAIKEATDTES 401
T + + C D+ R +Q S+ + I + E A A + S
Sbjct: 448 TQGIVDSKVLLRCKGVDQINLFRLVQYIQESKLAYKIESYVAHVEEEAVGAGHGKPPSRS 507
Query: 402 ELPHLSGMS--VITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLS 459
P L +S +I+L L S F+ + + D Q LS
Sbjct: 508 SAPVLHTLSSFLISLTNLSSEGRIFYEKLATDPPDIQ---------------------LS 546
Query: 460 LWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFG----TCLEAPHVI-DVDL 514
L+P F +A + ++IL GT+SP N + S L T L HVI +L
Sbjct: 547 YLLLSPTHAFSSIATSARAVILAGGTMSPFNDYKSHLFPYLPESKLTTLSCGHVIPPSNL 606
Query: 515 QVLTSVISTGPDNYP---LNASYK-------------------------TADG------- 539
V T GP+ P +N++++ DG
Sbjct: 607 CVWT---LAGPEPGPNRDINSTFEFSFQRRGEASTMSNLGMAILNMCNVVPDGVVVFFPS 663
Query: 540 YKLMEKLCNRWRETGQ------------WSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNS 587
Y +E++ W+ G W RL +K +F E +GGS ++ VL+ Y +
Sbjct: 664 YGYLEEVVTAWKGAGPRNSQGQNGASSIWDRLQQRKAVFSETRGGSSDE---VLEAYSRA 720
Query: 588 ISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGK-------------- 633
I D + S A +GA L+V GK
Sbjct: 721 IL------------------GDGSEPHSGAAAKPRGALLLSVVGGKMSEGINFSDRLGRC 762
Query: 634 -IVVGIPFPNINDIQVSLKKKY---------NDTYRSSKNLL----------SGNEWYCN 673
I+VG+P+PNIN + K +Y D + + + ++Y N
Sbjct: 763 VIIVGLPYPNINSPEWKAKTEYIESTTVQRLTDPSLGTAQMAREEAEAVAKQAARDFYEN 822
Query: 674 QAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLE-- 731
RA+NQ+IGR IRH+ DY AI+L+D R+ +R R + W+R + DS + L
Sbjct: 823 ACMRAVNQSIGRAIRHQGDYAAIVLVDRRYGTDRIREKLPGWIRGGLNG-DSHEKGLPQL 881
Query: 732 --GLKSFFR 738
L FFR
Sbjct: 882 MGALSGFFR 890
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 23 IQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNC 82
I PY PY Q FM L R +G +LESPTGTGKSLSL+C++L W +N
Sbjct: 17 IDFNHPYTPYDVQTDFMKAAYRVLQRG--NGQV-GILESPTGTGKSLSLICASLTWLRNQ 73
Query: 83 KLKNQLANI 91
+++ A++
Sbjct: 74 RVEEHEASL 82
>gi|302689377|ref|XP_003034368.1| hypothetical protein SCHCODRAFT_53201 [Schizophyllum commune H4-8]
gi|300108063|gb|EFI99465.1| hypothetical protein SCHCODRAFT_53201 [Schizophyllum commune H4-8]
Length = 869
Score = 149 bits (376), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 172/700 (24%), Positives = 284/700 (40%), Gaps = 148/700 (21%)
Query: 146 IFYASRTHSQISQVISEYKKT--------------------AYRVPMAV-LASRKHYCTN 184
I+YASRTHSQ+SQV+ E ++ Y AV L SRK C N
Sbjct: 206 IYYASRTHSQLSQVLPELRRVDERRASCSGKRAREEDDEVRYYTTTRAVALGSRKQLCIN 265
Query: 185 KYVRD--KENIDEECKLLLGDRNLG-CPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVG 241
+ + ++DE C+ +L ++ CP + + L+ DIE+L G
Sbjct: 266 DTLLKGKRVDLDEACRAMLAEKKEKRCPHLPSQEEEAAMLDLRDQILATPKDIEELAATG 325
Query: 242 QVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARD 301
+ C Y+ +R D A+LV PY+ + R A+ +D+K I+++DEAHN +
Sbjct: 326 RASGICPYFGSRKAIDQAELVTLPYNLLFQRSAREALGIDLKDQIVVIDEAHN---VIPT 382
Query: 302 AGSVDIDEDVLLKLQMELEQVCS-----------VNPMIYQPLIEMTQDLV----GW--I 344
S+ L ++++ L QV + V+ + + L + LV GW +
Sbjct: 383 LLSLSTTSLPLSQIRLSLAQVTTYLAKFKTRLKHVHVLSLRRLTVFLESLVACVEGWGGV 442
Query: 345 ER---RKATLAKREFQ--HFFSCWTGDK--------ALRELQEANISRQCFPILLECATK 391
+R AT K E + F G K R L+ + I+R+ LE
Sbjct: 443 DRAPTHPATSPKTEIMTPNDFVSRLGKKVEGINLLEVERYLKASRIARKISGYCLELEEA 502
Query: 392 AIKE-----ATDTESELPHLSGMS--VITLEGLF--SSLTYFFSRNGSHVSDYQLALQKY 442
A E A+ + +P L + +++L G+ +++ + NGS YQL
Sbjct: 503 AKGEEGPVTASKRKGMVPPLHAVEDFMVSLSGMNDDGRISFIRNANGSLEVRYQL----- 557
Query: 443 IKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPM----NSFSSELGV 498
LNP F +V + + +++L GT+SPM N S +
Sbjct: 558 --------------------LNPEPNFAEVVDEARAVVLAGGTMSPMSDVFNQLFSHVAA 597
Query: 499 QFGTCLEAPHVI-DVDLQVLTSVISTGPDNYPL---------------------NASYKT 536
+ T H+I +LQ L V++ GP PL N T
Sbjct: 598 ERLTSFSCGHIIPSSNLQTL--VVTKGPKGGPLEFKAERQKDPVAIEELGQILFNLVCVT 655
Query: 537 ADG-------YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSIS 589
G Y + W ++G RL +K +F EP+ D + VL+ Y ++
Sbjct: 656 PKGMVVFFPSYSFLNAAKAAWGQSGALGRLEGRKKIFFEPE--ETTDVDKVLQSYATAVH 713
Query: 590 QGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVS 649
+ V R K G I ++ + A LA R ++VG+P+ N+ ++
Sbjct: 714 E------VDPSRPK-PGALLFAVIGAKLSEGLNFADDLA--RSVVIVGMPYANLGSAELK 764
Query: 650 LKKKY-----NDTYRSSKNLL------SGNEWYCNQAFRALNQAIGRCIRHRFDYGAIIL 698
+ Y R K + + E Y N A+NQ+IGR IRH+ D+ A++L
Sbjct: 765 ERMAYVKRLEERRIREGKQVREKGAKDAAAELYENMCMNAVNQSIGRAIRHQGDWAALVL 824
Query: 699 LDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
LD R+ R + KW+ + D++ ++ L +F+R
Sbjct: 825 LDRRYANVAIRNKLPKWIGSGLTVADTYGMVIKELATFYR 864
Score = 45.1 bits (105), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 35/56 (62%), Gaps = 6/56 (10%)
Query: 27 FPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQN 81
FPY QPY QL M + L+ + +++ESPTGTGK+LSLL ++L W ++
Sbjct: 20 FPYPQPYQIQLDLMRHLYEVLESKK-----ISIVESPTGTGKTLSLLTASLTWLRD 70
>gi|1666893|gb|AAB18749.1| CHL1 potential helicase [Homo sapiens]
Length = 906
Score = 149 bits (376), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 176/741 (23%), Positives = 289/741 (39%), Gaps = 215/741 (29%)
Query: 146 IFYASRTHSQISQVISEYKKTAY--RVPMAVLASRKHYCTNKYVRD---KENIDEECKLL 200
I+Y SRTHSQ++Q + E KK+ + V + L SR++ C N+ V+ + I++ C +
Sbjct: 229 IYYCSRTHSQLAQFVHEVKKSPFGKDVRLVSLGSRQNLCVNEDVKSLGSVQLINDRCVDM 288
Query: 201 LGDRNL-------------------GCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVG 241
R+ CP F N H+ G L+ EV D+E L+ +G
Sbjct: 289 QRSRHEKKKGAEEEKPKRRRQEKQAACP-FYN-HEQMG--LLRDEALAEVKDMEQLLALG 344
Query: 242 QVVRGCSYYAARSMADDAQLVFCPYSYIINPVIR-------------------------G 276
+ R C YY +R AQLV PY +++ R G
Sbjct: 345 KEARACPYYGSRLAIPAAQLVVLPYQMLLHAATRQAAGIRLQDQVVIIDEAHNLIDTITG 404
Query: 277 AMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMEL----------------- 319
V++ G+ L + ++ + R + + LK + L
Sbjct: 405 MHSVEVSGSQLCQAHSQLLQYVERYGKRLKAKNLMYLKQILYLLEKFVAVLGGNIKQNPN 464
Query: 320 --------EQVCSVNPMIYQPLIE---------------MTQDLVGWIERRKATLAKRE- 355
++ ++N ++Q I+ +++ L G+ ER A + RE
Sbjct: 465 TQSLSQTGTELKTINDFLFQSQIDNINLFKVQRYCEKSMISRKLFGFTERYGAVFSSREQ 524
Query: 356 -----FQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMS 410
FQ F L+ LQ T+A+ D ES+ L S
Sbjct: 525 PKLAGFQQF---------LQSLQPRT-------------TEALAAPAD-ESQASTLRPAS 561
Query: 411 -VITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVF 469
++ +EG ++LT +++G + Q +L + TL LNPAV F
Sbjct: 562 PLMHIEGFLAALTTA-NQDGRVILSRQGSLSQ--------------STLKFLLLNPAVHF 606
Query: 470 KDVAELSLSIILTSGTLSPMNSFSSEL----GVQFGTCLE--APHVIDVDLQVLTSVIST 523
V + ++++ GT+ P++ F +L GV+ +E HVI D +L VI +
Sbjct: 607 AQVVKECRAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHVIPPD-NILPLVICS 665
Query: 524 GPDNYPLNASYKTADGYKLMEK----LCN------------------------RWRETGQ 555
G N PL +++ + ++M++ LCN W + G
Sbjct: 666 GISNQPLEFTFQKRELPQMMDEVGRILCNLCGVVPGGVVCFFPSYEYLRQVHAHWEKGGL 725
Query: 556 WSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIES 615
RL A+K +F EPK Q E VL Y I C
Sbjct: 726 LGRLAARKKIFQEPKSAHQ--VEQVLLAYSRCIQ---ACG-------------------- 760
Query: 616 QENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKKYNDTY-- 658
QE GA L+V GK ++VG+PFPNI ++ K Y D
Sbjct: 761 QERGQVTGALLLSVVGGKMSEGINFSDNLGRCVVMVGMPFPNIRSAELQEKMAYLDQTLP 820
Query: 659 RSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRK 718
R+ G N +A+NQ+IGR IRH+ D+ +I+LLD+R+ A + W+R
Sbjct: 821 RAPGQAPPGKALVENLCMKAVNQSIGRAIRHQKDFASIVLLDQRYARPPVLAKLPAWIRA 880
Query: 719 SIKQYDSFDASLEGLKSFFRD 739
++ +F ++ ++ F R+
Sbjct: 881 RVEVKATFGPAIAAVQKFHRE 901
Score = 55.1 bits (131), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 40/68 (58%), Gaps = 5/68 (7%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
VG I FP+ PY Q FM + L+ A + G + ESPTGTGKSLSL+C L+W
Sbjct: 8 VGAIHFPFPFTPYSIQEDFMAELYRVLE-AGKIG----IFESPTGTGKSLSLICGALSWL 62
Query: 80 QNCKLKNQ 87
++ + K +
Sbjct: 63 RDFEQKKR 70
>gi|449491848|ref|XP_004159020.1| PREDICTED: probable ATP-dependent RNA helicase DDX11-like [Cucumis
sativus]
Length = 1168
Score = 149 bits (376), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 194/757 (25%), Positives = 307/757 (40%), Gaps = 210/757 (27%)
Query: 146 IFYASRTHSQISQVISEYKKTAYRVPMAV--LASRKHYCTNKYVR---DKENIDEEC--- 197
+++ SRTHSQ+SQ I E +KT + + V L SRK +C N+ V +I+E+C
Sbjct: 199 VYFCSRTHSQLSQFIRELRKTVFASELNVICLGSRKIFCINEEVLKLGSASHINEQCLEL 258
Query: 198 -----------KLLLGDRNL-------GCPQFKNVHKVRGHPSLQKG-----GCHEVHDI 234
K L G + GCP +N P LQK E DI
Sbjct: 259 QKKKTTETSKAKKLAGAGKMSRTKASSGCPMLRN-------PKLQKNFRSQISQREALDI 311
Query: 235 EDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHN 294
EDL+++G+ V C YY +RS+ A L+ PY +++ R ++ + +K +I+I+DEAHN
Sbjct: 312 EDLIHLGRKVGTCPYYGSRSLVQGADLIVLPYQSLLSKSSRESLGLVLKNSIVIIDEAHN 371
Query: 295 IED--IARDAGSVDID--EDVLLKLQMELEQVCSV----NPMIYQPLIEMTQDLVGWIER 346
+ D I+ V E+V ++ E+ CS+ N Q LI +T+ L+ +
Sbjct: 372 LADSLISMHDSKVSYSQLENVHHHMERYFERFCSLLGPGNRRYIQTLIIVTRALLKLLHI 431
Query: 347 RKA-------------------TLAKREFQHFFSCWTGD----KALRELQEANI------ 377
+A ++A +F FS + K L+ ++E+NI
Sbjct: 432 EEASYVEPCQNDSTGKNGALDYSMAINDF--LFSLNIDNINFVKLLQYIKESNIMHKVSG 489
Query: 378 -SRQCFPILLECATKAIKEATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQ 436
+ + K E + ES L ++ + L SL F +G +
Sbjct: 490 YGERTIKPRNDLGIKPSGECYEKESTLSSFRALADMLL-----SLIN-FDGDGKMI---- 539
Query: 437 LALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSEL 496
I ++ G + L +F +V + + +++L GTL P+ L
Sbjct: 540 ------ISKNRPTGLGERGGCIKFVKLRGDKIFSEVVDQAHAVVLAGGTLQPIEETRERL 593
Query: 497 -------GVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTADGYKLMEK---- 545
+ F +C H++ + +L +S+GP + SY ++++
Sbjct: 594 FPWLPPSQLNFFSC---SHIVPPE-SILPMAVSSGPSGQLFDFSYNRRSSSAIVKELGLL 649
Query: 546 LCN------------------------RWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVL 581
LCN W+ +G R+ KK +F EP+ + D E VL
Sbjct: 650 LCNIVTVVPEGIVVFFSSFDYEEQVYGLWKTSGILDRIMKKKRIFREPRKNT--DVESVL 707
Query: 582 KHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKI------- 634
K Y +I SK K N L+T GA AV GKI
Sbjct: 708 KEYKENIDALSK---------KDPKQNILST---------SGAVLFAVVGGKISEGINLS 749
Query: 635 --------VVGIPFPNINDIQV--------------SLK--KKYNDT-----------YR 659
+VG+P+P+ +DI++ S+K K YND R
Sbjct: 750 DGMGRCIVMVGLPYPSPSDIELMERVKHIENLGNSNSIKSSKFYNDVPSGDVETGLEILR 809
Query: 660 SSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERF---QEERNRAHISKWL 716
S K G E+Y N +A+NQ+IGR IRH DY AI+L+D R+ +R+ +H + L
Sbjct: 810 SCKR---GKEYYENLCMKAVNQSIGRAIRHINDYAAILLVDVRYTSNSSKRSFSHPADKL 866
Query: 717 RKSIKQYDSFDASLEG-------LKSFFRDVKGWVGK 746
K IK D AS E L F + + W G+
Sbjct: 867 PKWIK--DCLIASTENYGEVHRRLNQFLKLTERWDGQ 901
Score = 53.1 bits (126), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 33/52 (63%), Gaps = 5/52 (9%)
Query: 27 FPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
FPY+PY Q FM + L++ ++LESPTGTGK+LS++C TL W
Sbjct: 14 FPYKPYSIQFDFMKALYEYLNKG-----GISMLESPTGTGKTLSIICGTLQW 60
>gi|410046333|ref|XP_003952169.1| PREDICTED: LOW QUALITY PROTEIN: putative ATP-dependent RNA helicase
DDX12-like [Pan troglodytes]
Length = 920
Score = 148 bits (374), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 175/738 (23%), Positives = 286/738 (38%), Gaps = 213/738 (28%)
Query: 146 IFYASRTHSQISQVISEYKKTAY--RVPMAVLASRKHYCTNKYVRD---KENIDEECKLL 200
I+Y SRTHSQ++Q + E KK+ + V + L SR++ C N+ VR + I++ C +
Sbjct: 222 IYYCSRTHSQLAQFVHEVKKSPFGKDVRLVSLGSRQNLCVNEDVRSLGSVQLINDRCVDM 281
Query: 201 LGDRN---------------LGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVR 245
R+ CP F N H+ G L+ EV DIE L+ +G+ R
Sbjct: 282 QRSRHEKKKGAEXRRRQEKQAACP-FYN-HEQMG--LLRDEALAEVKDIEQLLALGKEAR 337
Query: 246 GCSYYAARSMADDAQLVFCPYSYIINPVIR-------------------------GAMEV 280
C YY +R AQLV PY +++ R G V
Sbjct: 338 ACPYYGSRLAIPAAQLVVLPYQMLLHAATRQAAGIRLQDQVVIIDEAHNLIDTITGMHSV 397
Query: 281 DIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMEL--------------------- 319
++ G+ L + ++ + R + + LK + L
Sbjct: 398 EVSGSQLCQAHSQLLQYMERYGKRLKAKNLMYLKQILYLLEKFVAVLGGNIKQNPNTQSL 457
Query: 320 ----EQVCSVNPMIYQPLIE---------------MTQDLVGWIERRKATLAKRE----- 355
++ ++N ++Q I+ +++ L G+ ER A + RE
Sbjct: 458 SQTGTELKTINDFLFQSRIDNINLFKVQRYCEKSMISRKLFGFTERYGAVFSSREQPKLA 517
Query: 356 -FQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVITL 414
FQ F L+ LQ P A ++++ P ++ +
Sbjct: 518 GFQQF---------LQSLQPRTTEALAAP------------ADESQASTPR-PASPLMHI 555
Query: 415 EGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAE 474
EG ++LT +++G + Q +L + TL LNPAV F V +
Sbjct: 556 EGFLAALTTA-NQDGRVILSRQGSLSQ--------------STLKFLLLNPAVHFAQVVK 600
Query: 475 LSLSIILTSGTLSPMNSFSSEL----GVQFGTCLE--APHVIDVDLQVLTSVISTGPDNY 528
++++ GT+ P++ F +L GV+ +E HVI D +L VI +G N
Sbjct: 601 ECRAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHVIPPD-NILPLVICSGISNQ 659
Query: 529 PLNASYKTADGYKLMEK----LCN------------------------RWRETGQWSRLN 560
PL +++ D ++M++ LCN W + G RL
Sbjct: 660 PLEFTFQKRDLPQMMDEVGRILCNLCGVVSGGVVCFFPSYEYLRQVHAHWEKGGLLGRLA 719
Query: 561 AKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENAN 620
A+K +F EPK Q E VL Y I C QE
Sbjct: 720 ARKKIFQEPKSAHQ--VEQVLLAYSRCIQ---ACG--------------------QERGQ 754
Query: 621 KKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKKYNDTY--RSSKN 663
GA L+V GK ++VG+PFPNI ++ K Y D R+
Sbjct: 755 VTGALLLSVVGGKMSEGINFSDNLGRCVVMVGMPFPNIRSAELQEKMTYLDQTLPRAPGQ 814
Query: 664 LLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQY 723
G N +A+NQ+IGR IRH+ D+ +I+LLD+R+ A + W+ S++
Sbjct: 815 APPGKALVENLCMKAVNQSIGRAIRHQKDFASIVLLDQRYARPPVLAKLPAWIXASVEVK 874
Query: 724 DSFDASLEGLK----SFF 737
+F ++ ++ +FF
Sbjct: 875 ATFGPAIAAVQKVSPTFF 892
>gi|1517816|gb|AAB06962.1| helicase [Homo sapiens]
Length = 906
Score = 148 bits (374), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 175/741 (23%), Positives = 289/741 (39%), Gaps = 215/741 (29%)
Query: 146 IFYASRTHSQISQVISEYKKTAY--RVPMAVLASRKHYCTNKYVRD---KENIDEECKLL 200
I+Y SRTHSQ++Q + E KK+ + V + L SR++ C N+ V+ + I++ C +
Sbjct: 229 IYYCSRTHSQLAQFVHEVKKSPFGKDVRLVSLGSRQNLCVNEDVKSLGSVQLINDRCVDM 288
Query: 201 LGDRNL-------------------GCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVG 241
R+ CP F N H+ G L+ EV D+E L+ +G
Sbjct: 289 QRSRHEKKKGAEEEKPKRRRQEKQAACP-FYN-HEQMG--LLRDEALAEVKDMEQLLALG 344
Query: 242 QVVRGCSYYAARSMADDAQLVFCPYSYIINPVIR-------------------------G 276
+ R C YY +R AQLV PY +++ R G
Sbjct: 345 KEARACPYYGSRLAIPAAQLVVLPYQMLLHAATRQAAGIRLQDQVVIIDEAHNLIDTITG 404
Query: 277 AMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMEL----------------- 319
V++ G+ L + ++ + R + + LK + L
Sbjct: 405 MHSVEVSGSQLCQAHSQLLQYVERYGKRLKAKNLMYLKQILYLLEKFVAVLGGNIKQNPN 464
Query: 320 --------EQVCSVNPMIYQPLIE---------------MTQDLVGWIERRKATLAKRE- 355
++ ++N ++Q I+ +++ L G+ ER A + RE
Sbjct: 465 TQSLSQTGTELKTINDFLFQSQIDNINLFKVQRYCEKSMISRKLFGFTERYGAVFSSREQ 524
Query: 356 -----FQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMS 410
FQ F L+ LQ T+A+ D ES+ L S
Sbjct: 525 PKLAGFQQF---------LQSLQPRT-------------TEALAAPAD-ESQASTLRPAS 561
Query: 411 -VITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVF 469
++ +EG ++LT +++G + Q +L + TL LNPAV F
Sbjct: 562 PLMHIEGFLAALTTA-NQDGRVILSRQGSLSQ--------------STLKFLLLNPAVHF 606
Query: 470 KDVAELSLSIILTSGTLSPMNSFSSEL----GVQFGTCLE--APHVIDVDLQVLTSVIST 523
V + ++++ GT+ P++ F +L GV+ +E HVI D +L VI +
Sbjct: 607 AQVVKECRAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHVIPPD-NILPLVICS 665
Query: 524 GPDNYPLNASYKTADGYKLMEK----LCN------------------------RWRETGQ 555
G N PL +++ + ++M++ LCN W + G
Sbjct: 666 GISNQPLEFTFQKRELPQMMDEVGRILCNLCGVVPGGVVCFFPSYEYLRQVHAHWEKGGL 725
Query: 556 WSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIES 615
RL A+K +F EPK Q E VL Y I C
Sbjct: 726 LGRLAARKKIFQEPKSAHQ--VEQVLLAYSRCIQ---ACG-------------------- 760
Query: 616 QENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKKYNDTY-- 658
QE GA L+V GK ++VG+PFPNI ++ K Y D
Sbjct: 761 QERGQVTGALLLSVVGGKMSEGINFSDNLGRCVVMVGMPFPNIRSAELQEKMAYLDQTLP 820
Query: 659 RSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRK 718
R+ G N +A+NQ+IGR IRH+ D+ +++LLD+R+ A + W+R
Sbjct: 821 RAPGQAPPGKALVENLCMKAVNQSIGRAIRHQKDFASVVLLDQRYARPPVLAKLPAWIRA 880
Query: 719 SIKQYDSFDASLEGLKSFFRD 739
++ +F ++ ++ F R+
Sbjct: 881 RVEVKATFGPAIAAVQKFHRE 901
Score = 55.1 bits (131), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 40/68 (58%), Gaps = 5/68 (7%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
VG I FP+ PY Q FM + L+ A + G + ESPTGTGKSLSL+C L+W
Sbjct: 8 VGAIHFPFPFTPYSIQEDFMAELYRVLE-AGKIG----IFESPTGTGKSLSLICGALSWL 62
Query: 80 QNCKLKNQ 87
++ + K +
Sbjct: 63 RDFEQKKR 70
>gi|322706322|gb|EFY97903.1| DEAD-2 domain-containing protein [Metarhizium anisopliae ARSEF 23]
Length = 924
Score = 148 bits (374), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 160/682 (23%), Positives = 273/682 (40%), Gaps = 137/682 (20%)
Query: 146 IFYASRTHSQISQVISEYKKTAY-----------------RVPMAVLASRKHYCTNKYVR 188
I+Y SRTHSQ+SQ I+E ++ + V + L+SR+ C N V
Sbjct: 240 IYYTSRTHSQLSQFITELRRPKFPSSLPTSLAEKKSSVEETVKLLPLSSRQRLCINPSVA 299
Query: 189 ---DKENIDEECKLLLGDRNLG-CPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVV 244
+ I++ C L ++ CP + + V DIEDL +G+ +
Sbjct: 300 RLGSVQAINDRCAELQQSKSTKKCPYVPKEELLSQTHQFRDSALATVPDIEDLHQLGKSL 359
Query: 245 RGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGS 304
C YYA+RS A+++ PY ++ R A+ + ++G ++I+DEAHN+ D + +
Sbjct: 360 AVCPYYASRSALPGAEIITLPYPLLLQRSAREALGIKLEGNVVIIDEAHNVMDAVANVHA 419
Query: 305 VDIDEDVLLKLQMEL--------EQVCSVNPMIYQPLIEMTQDLVGWIERRKA-TLAKRE 355
+I L K + L +++ VN + + + L W+ K L R+
Sbjct: 420 AEIKLSDLHKGRGMLGIYVKRFGKKLKGVNRVNVGRVGRVIDGLTEWMNGAKGFKLIPRQ 479
Query: 356 FQHFF---SCWTGDKALRE---------LQEANISR--QCFPILLECATKAIKEATDTES 401
QH + T K + + +QE+ ++ + + +E + K T + +
Sbjct: 480 QQHGIVDANDLTRPKGIDQINMFELIQYIQESKLAYKIESYAAHVENENDSGKPGTKSST 539
Query: 402 ELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLW 461
+ H ++ L S F+ + D Q LS
Sbjct: 540 PVLHTLVSFLVALTNPSSEGRIFYQKTSGPAQDVQ---------------------LSYL 578
Query: 462 CLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFG----TCLEAPHVIDVDLQVL 517
L+P F + + ++IL GT+SP + + + L T L HVI + +
Sbjct: 579 LLSPTHAFSSIVSSARAVILAGGTMSPFDDYKNHLFPALADPKVTTLSCGHVIPRENLCV 638
Query: 518 TSVISTGPDNYPLNASYK---------------------TADG-------YKLMEKLCNR 549
++ T P SY+ DG Y +E++
Sbjct: 639 WTLTGTRPGGSSFEFSYQRRGDSEMVKELGLAILNICSVVPDGVVVFFPSYGYLEEVVAA 698
Query: 550 WR---------ETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSI--SQGSKCAVVR 598
W +T W RL +K +F E KG S ++ VL+ Y +I + GS +V+
Sbjct: 699 WSRRAPGDKNPQTTIWDRLQTRKMVFRETKGCSSDE---VLQEYSQAILGNGGSTTGLVK 755
Query: 599 KKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKY---- 654
K G L+ + + + + L C +VVG+P+PNI + K Y
Sbjct: 756 GK----GGALLLSVVGGKMSEGINFSDRLGRC--VMVVGLPYPNIASPEWKAKMDYIEST 809
Query: 655 -----NDTYRSSKNLLSGNE-----------WYCNQAFRALNQAIGRCIRHRFDYGAIIL 698
D+ R + L+ +E +Y N RA+NQ+IGR IRH+ DY AI+L
Sbjct: 810 TLANLQDSRRDAGPKLTKDEAAARAKQAARDFYENACMRAVNQSIGRAIRHKGDYAAIVL 869
Query: 699 LDERFQEERNRAHISKWLRKSI 720
D R+ ER + + W+R +
Sbjct: 870 ADRRYATERIQGKLPGWIRSGM 891
>gi|332232617|ref|XP_003265500.1| PREDICTED: probable ATP-dependent RNA helicase DDX11 isoform 1
[Nomascus leucogenys]
Length = 906
Score = 148 bits (374), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 172/725 (23%), Positives = 290/725 (40%), Gaps = 183/725 (25%)
Query: 146 IFYASRTHSQISQVISEYKKTAY--RVPMAVLASRKHYCTNKYVRD---KENIDEECKLL 200
I+Y SRTHSQ++Q + E KK+ + V + L SR++ C N+ V+ + I++ C +
Sbjct: 229 IYYCSRTHSQLAQFVHEVKKSPFGKDVRLVSLGSRQNLCVNEDVKSLGSVQLINDRCVDM 288
Query: 201 LGDRNL-------------------GCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVG 241
R+ CP F N H+ G L+ +V DIE L+ +G
Sbjct: 289 QRSRHEKKKGAEEEKPKRRRQEKQAACP-FYN-HEQMG--LLRDEALADVKDIEQLLALG 344
Query: 242 QVVRGCSYYAARSMADDAQLVFCPYSYIINPV-------------------------IRG 276
+ R C YY +R AQLV PY +++ I G
Sbjct: 345 KEARACPYYGSRLAIPAAQLVVLPYQMLLHAATRQAAGIRLQDQVVIIDEAHNLIDTITG 404
Query: 277 AMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMEL----------------- 319
V++ G+ L + ++ + R + + LK + L
Sbjct: 405 MHSVEVSGSQLCQAHSQLLQYMERYGKRLKAKNLMYLKQILYLLEKFVAVLGGNIKQNPN 464
Query: 320 --------EQVCSVNPMIYQPLIE---------------MTQDLVGWIERRKATLAKRE- 355
++ ++N ++Q I+ +++ L G+ ER A L+ RE
Sbjct: 465 TQSLSQTGTELKTINDFLFQSQIDNINLFKVQRYCEKSMISRKLFGFTERYGAVLSSREQ 524
Query: 356 -----FQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMS 410
FQ F L+ LQ T+A+ D
Sbjct: 525 PKLAGFQQF---------LQSLQPRT-------------TEALAAPADESQASAPRPASP 562
Query: 411 VITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFK 470
++ +EG ++LT +++G + Q +L + TL LNPAV F
Sbjct: 563 LMHIEGFLAALTTA-NQDGRVILSRQGSLSQ--------------STLKFLLLNPAVHFA 607
Query: 471 DVAELSLSIILTSGTLSPMNSFSSEL----GVQFGTCLE--APHVIDVDLQVLTSVISTG 524
V + ++++ GT+ P++ F +L GV+ +E HVI D +L VI +G
Sbjct: 608 QVVKECRAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHVIPPD-NILPLVICSG 666
Query: 525 PDNYPLNASYKTADGYKLMEK----LCN------------------------RWRETGQW 556
N PL +++ + ++M++ LCN W + G
Sbjct: 667 ISNQPLEFTFQKRELPQMMDEAGRILCNLCGVVPGGVVCFFPSYEYLRQVHAHWEKGGLL 726
Query: 557 SRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQ 616
RL A+K +F EPK Q E VL Y I QG C ++R + G L+ + +
Sbjct: 727 DRLAARKKIFQEPKSAHQ--VEQVLLAYSRCI-QG--CG---QERGRVTGALLLSVVGGK 778
Query: 617 ENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYNDTY--RSSKNLLSGNEWYCNQ 674
+ + L C ++VG+PFPNI ++ K Y D R+ G N
Sbjct: 779 MSEGINFSDNLGRC--VVMVGMPFPNIRSPELQEKMAYLDQTLPRAPGQAPPGKALVENL 836
Query: 675 AFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLK 734
+A+NQ+IGR IRH+ D+ +I+LLD+R+ A + W+R + +F ++ ++
Sbjct: 837 CMKAVNQSIGRAIRHQKDFASIVLLDQRYARPPVLAKLPAWIRARVDVKSTFGPAIAAVQ 896
Query: 735 SFFRD 739
F R+
Sbjct: 897 KFHRE 901
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 40/68 (58%), Gaps = 5/68 (7%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
VG I FP+ PY Q FM + L+ A + G + ESPTGTGKSLSL+C L+W
Sbjct: 8 VGAIHFPFPFTPYSIQEDFMAELYRVLE-AGKIG----IFESPTGTGKSLSLICGALSWL 62
Query: 80 QNCKLKNQ 87
++ + K +
Sbjct: 63 RDFEQKKR 70
>gi|429965550|gb|ELA47547.1| hypothetical protein VCUG_00978 [Vavraia culicis 'floridensis']
Length = 855
Score = 148 bits (374), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 105/368 (28%), Positives = 177/368 (48%), Gaps = 36/368 (9%)
Query: 146 IFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEECKLLLGDRN 205
IF SRTH Q+ Q++++ + T Y + VLASR+ C N+ L GD N
Sbjct: 65 IFICSRTHKQLDQLVAQLRSTVYTPKVCVLASRRVLCLNR------------NALKGDVN 112
Query: 206 LGCPQFKNVHKVR---GHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLV 262
C + + R G L K +VHDIE+L +G+ GC YYA+R +++ A +
Sbjct: 113 STCRELVKKGECRYFMGKERLVKS-IGDVHDIEELRQMGEKCTGCPYYASRMLSESATIT 171
Query: 263 FCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQV 322
F PY+Y+++P++R M +++K +++I+DEAHNIED R AGS+++ + + + EL
Sbjct: 172 FMPYNYVVDPMVRHTMGIELKNSVVIVDEAHNIEDACRSAGSIELTNNTIDIMLKELVSA 231
Query: 323 CSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRELQEANISRQCF 382
+ L+ + L + + + ++ +C+ GD+ ++ L +Q
Sbjct: 232 YRRAEEYKEDLMVLNFFLRKMRDVSDVKMTRSNLENECACFKGDEIVQLLTH----KQVV 287
Query: 383 PILLECATKAIKEATDTESELPH-LSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQK 441
P L+ A + EL S M + T+E L S L FS Y L +
Sbjct: 288 PELI--AKMRMNALFKKNEELKDAFSLMFLQTIESLVSVLMLIFS---GKAPSYALIV-- 340
Query: 442 YIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFG 501
G T++ L+P V+F V + ++++ SGTL+P ++ +EL +F
Sbjct: 341 --------GGAPGIPTINFMLLDPDVMFNAVVQHVHALVVLSGTLTPFSAVENELNHRFA 392
Query: 502 TCLEAPHV 509
L AP V
Sbjct: 393 YSLVAPAV 400
Score = 82.8 bits (203), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 62/113 (54%), Gaps = 14/113 (12%)
Query: 629 VCRGKIVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIR 688
+ R I++G+P PNI ++ V L + + WY NQ F+A+NQAIGRC+R
Sbjct: 569 LARAVILIGMPCPNIKEVSVELMRNHRPG------------WYENQIFKAVNQAIGRCVR 616
Query: 689 HRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFRDVK 741
HR D+G + L+D R++ ++ R + W R + + F +E + F R +K
Sbjct: 617 HRLDWGGVFLVDVRYRRDKER--LCGWCRDRMVYGEYFGDVVEDFRGFVRKMK 667
Score = 55.8 bits (133), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 38/60 (63%), Gaps = 5/60 (8%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ I + FP++PY +Q++ ++I L + ++ESPTGTGKS+++LC+ LAW
Sbjct: 3 INSITIAFPFKPYPAQILTCSKIIDCLKNKKT-----GIIESPTGTGKSIAILCAVLAWH 57
>gi|357468391|ref|XP_003604480.1| ATP-dependent RNA helicase chl1 [Medicago truncatula]
gi|355505535|gb|AES86677.1| ATP-dependent RNA helicase chl1 [Medicago truncatula]
Length = 1129
Score = 148 bits (373), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 170/694 (24%), Positives = 284/694 (40%), Gaps = 176/694 (25%)
Query: 146 IFYASRTHSQISQVISEYKKTAYRVPMAV--LASRKHYCTNKYVRDKEN---IDEEC--- 197
+++ SRTHSQ+SQ + E +KT + M V L SRK+ C N+ V N I+E C
Sbjct: 199 VYFCSRTHSQLSQFVKELRKTVFADEMGVVSLGSRKNLCINQEVLALGNSSRINERCLEL 258
Query: 198 ---------KLLLGDRNL----GCPQFKNV---HKVRGHPSLQKGGCHEVHDIEDLVNVG 241
K G R GCP + H+ R S Q+G DIEDL N+G
Sbjct: 259 QKKKKNDNLKAGTGARRTKASSGCPMLRKRRLQHEFRNEVS-QQGPL----DIEDLANLG 313
Query: 242 QVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARD 301
+ + C YY +RSM LV PY +++ R A+ +++K I+I+DEAHN+ D +
Sbjct: 314 RTMGTCPYYGSRSMVRRVDLVVLPYQSLLSKSSREALGLNLKSNIVIIDEAHNLADSLIN 373
Query: 302 AGSVDIDEDVLLKLQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFS 361
+ ++ L Q+ +V+ I + + ++L+G RR Q F
Sbjct: 374 ----------MYDSKLTLSQLENVHRHIERYFVRF-RNLLGPANRRYIQTLMVLIQAFLR 422
Query: 362 CWTGDK------ALRELQEANISRQCFPILLECATKAIKEATDT-----------ESELP 404
+K + R+ ++A+ R+ + + D ES +
Sbjct: 423 VLVNEKDGNLMDSCRDTEQASEERRASDFTMAINDFVFELNIDNINLVKLLTYIKESNIM 482
Query: 405 H-LSGMS--VITLEGLFS-SLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWT----- 455
H +SG + TLE + + ++T +GS S +Q + +K+ G
Sbjct: 483 HKVSGYGEKMATLEKVSALNITGEHGEDGSCQSAFQSLAAMLLSLVNKDSDGRMIISRSS 542
Query: 456 ---------HTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSEL-------GVQ 499
+ L+ +F ++ + + +++L GTL P+ L +
Sbjct: 543 STSSRKQGQGYIKYVMLSAEKIFSEIVDEAHAVVLVGGTLQPIEETRERLFPWLPPNKLH 602
Query: 500 FGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTADGYKLMEK----LCN------- 548
F +C H++ + +L +S GP + SY + +M++ LCN
Sbjct: 603 FFSC---GHIVPPE-SILPIAVSCGPTGRSFDFSYSSRSSADMMQELGLLLCNLVTVVPQ 658
Query: 549 -----------------RWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQG 591
W +G R+ +K +F EP+ + D E VLK Y ++I
Sbjct: 659 GIVVFFPSFDYESRVYENWESSGILERITKRKRVFREPR--NNMDVESVLKEYKDTIYTP 716
Query: 592 SKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVV 636
S N+++N A+ GA LAV K I+V
Sbjct: 717 SSV------------NSEVN------QASHTGAVLLAVVGAKLSEGINLSDGMGRCIIMV 758
Query: 637 GIPFPNINDIQVSLKKKYNDTYRSSKNLLS---------------------------GNE 669
G+P+ + +DI++ + K+ D +R+SK L + G E
Sbjct: 759 GLPYASPSDIELLERIKHIDGFRNSKFLENPGFSASYDVYGGDIQGGFDILRSCSHRGKE 818
Query: 670 WYCNQAFRALNQAIGRCIRHRFDYGAIILLDERF 703
+Y N +A+NQ+IGR IRH DY AI+L+D R+
Sbjct: 819 YYENLCMKAVNQSIGRAIRHINDYAAILLVDTRY 852
Score = 51.2 bits (121), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 34/52 (65%), Gaps = 5/52 (9%)
Query: 27 FPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
FP++PY Q+ FM + +L+ ++LESPTGTGK++S++CS L W
Sbjct: 17 FPFKPYSIQIDFMNALYQSLNHG-----GISMLESPTGTGKTMSVICSALQW 63
>gi|344303265|gb|EGW33539.1| ATP-dependent RNA helicase CHL1 [Spathaspora passalidarum NRRL
Y-27907]
Length = 816
Score = 148 bits (373), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 174/696 (25%), Positives = 290/696 (41%), Gaps = 125/696 (17%)
Query: 123 STNGQTAQVAMNNKNVKKKMTPT------------IFYASRTHSQISQVISEYKKTAY-- 168
+T ++ ++A + +KKK+ P IFY SRTHSQ++Q + + T +
Sbjct: 156 TTTDESTELARQIEELKKKLAPKKDVDYANDCPTKIFYCSRTHSQLNQFAGQLRLTKFES 215
Query: 169 -------RVPMAVLASRKHYCTNKYVRDK---ENIDEECKLLLGDRNLGCPQF-KNVHKV 217
R L SRK C N VR + +++++ C + L GC KN
Sbjct: 216 SFDDLQERTKYLPLGSRKQLCINDKVRSQVTVQSMNDAC-IDLQKSKEGCKFLPKNYVDS 274
Query: 218 RGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGA 277
+ ++ DIEDL +G + C YY+ R + +++ PY I R
Sbjct: 275 DLVKEFSELSVAKIRDIEDLGILGTDLNVCPYYSVRGGIELTEIISLPYQMIFQDSTRDI 334
Query: 278 MEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVL------LKLQME--LEQVCSVNPMI 329
M++D+K +I+I+DEAHNI D+ SV I D L LK + ++++ S N +
Sbjct: 335 MKLDVKDSIVIIDEAHNIMDVITSLYSVSITADNLDRVIKSLKFYLGKFIKKLNSGNRIN 394
Query: 330 YQPLIEMTQDLVGWIERRKATLAKRE---FQHFFSCWTGDKALRELQEANISRQCFPILL 386
Q LI++ Q L +I + + + F T D E +S+ +
Sbjct: 395 LQKLIKICQSLRNFINDKSGKVKPGDEINVDDIFQDSTADLVNIHKLEKFLSKTKIAYKI 454
Query: 387 ECATKAIKEATDTESELPHLSGMSVI-TLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKR 445
E + I+ +T + + S ++ ++ SLT+ S G D
Sbjct: 455 ENYLEKIEIENETNTTIRSSSSTPLLFSVVSFLKSLTH-PSTEGKFFWDVT--------- 504
Query: 446 DSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSEL-------GV 498
N T T++ L+P+ VFKD+ + I+L GT+ PM+ ++ L V
Sbjct: 505 -------NNTTTINYMLLDPSGVFKDILNQAKCILLCGGTMEPMSDYADYLFPSVLPEKV 557
Query: 499 QFGTCLEAPHVI-DVDLQVLTSVISTGPD-----NYPLNASYKTADG------------- 539
TC HVI +L V T G D N NA A G
Sbjct: 558 NKFTC---GHVIPKENLDVFTVTEMNGIDFEFSFNKRNNAVQLNALGSFIIEVCKRVPYG 614
Query: 540 -------YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGS 592
YK + ++ W+++ + ++ K +F EP ++ E L Y S + +
Sbjct: 615 IVIFFPSYKYLNQVLMEWKKSNLLNSISQLKSVFQEPSDATK--VEQTLSEY--STAAQA 670
Query: 593 KCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKK 652
K A++ G I +N + R ++VG+P+PN ++ K+
Sbjct: 671 KGAIL----FSVVGGKMSEGINFSDN----------LARAVLMVGLPYPNAFSGEMVAKR 716
Query: 653 KYNDTYRSSKNLLS----GNE-------WYCNQAFRALNQAIGRCIRHRFDYGAIILLDE 701
+ + KN++S NE +Y N RA+NQ+IGR IRH DY I L+D
Sbjct: 717 NFIE-----KNVISKGGTNNEAKEKSMNYYENLCMRAVNQSIGRSIRHIKDYSIIYLIDS 771
Query: 702 RFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFF 737
RF+ R + +SKW+R ++ ++ + FF
Sbjct: 772 RFKYPRIQIKLSKWVRDRLQATNNTSQIFNQTEEFF 807
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 34/56 (60%), Gaps = 4/56 (7%)
Query: 28 PYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCK 83
PY PY Q+ M V T+ + G + ESPTGTGK+LSL+CS++ W ++ K
Sbjct: 13 PYDPYTIQIQLMNAVYDTISNDYKIG----IFESPTGTGKTLSLICSSMTWLRHYK 64
>gi|449448180|ref|XP_004141844.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8-like [Cucumis sativus]
Length = 914
Score = 148 bits (373), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 194/754 (25%), Positives = 307/754 (40%), Gaps = 205/754 (27%)
Query: 146 IFYASRTHSQISQVISEYKKTAYRVPMAV--LASRKHYCTNKYVR---DKENIDEEC--- 197
+++ SRTHSQ+SQ I E +KT + + V L SRK +C N+ V +I+E+C
Sbjct: 213 VYFCSRTHSQLSQFIRELRKTVFASELNVICLGSRKIFCINEEVLKLGSASHINEQCLEL 272
Query: 198 -----------KLLLGDRNL-------GCPQFKNVHKVRGHPSLQKG-----GCHEVHDI 234
K L G + GCP +N P LQK E DI
Sbjct: 273 QKKKTTETSKAKKLAGAGKMSRTKASSGCPMLRN-------PKLQKNFRSQISQREALDI 325
Query: 235 EDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHN 294
EDL+++G+ V C YY +RS+ A L+ PY +++ R ++ + +K +I+I+DEAHN
Sbjct: 326 EDLIHLGRKVGTCPYYGSRSLVQGADLIVLPYQSLLSKSSRESLGLVLKNSIVIIDEAHN 385
Query: 295 IED--IARDAGSVDID--EDVLLKLQMELEQVCSV----NPMIYQPLIEMTQDLVGWIER 346
+ D I+ V E+V ++ E+ CS+ N Q LI +T+ L+ +
Sbjct: 386 LADSLISMHDSKVSYSQLENVHHHMERYFERFCSLLGPGNRRYIQTLIIVTRALLKLLHI 445
Query: 347 RKA-------------------TLAKREFQHFFSCWTGD----KALRELQEANI------ 377
+A ++A +F FS + K L+ ++E+NI
Sbjct: 446 EEASYVEPCQNDSTGKNGALDYSMAINDF--LFSLNIDNINFVKLLQYIKESNIMHKVSG 503
Query: 378 -SRQCFPILLECATKAIKEATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQ 436
+ + K E + ES L ++ + L SL F +G +
Sbjct: 504 YGERTIKPRNDLGIKPSGECYEKESTLSSFRALADMLL-----SLIN-FDGDGKMI---- 553
Query: 437 LALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSEL 496
I ++ G + L +F +V + + +++L GTL P+ L
Sbjct: 554 ------ISKNRPTGLGERGGCIKFVKLRGDKIFSEVVDQAHAVVLAGGTLQPIEETRERL 607
Query: 497 -------GVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTADGYKLMEK---- 545
+ F +C H++ + +L +S+GP + SY ++++
Sbjct: 608 FPWLPPSQLNFFSC---SHIVPPE-SILPMAVSSGPSGQLFDFSYNRRSSSAIVKELGLL 663
Query: 546 LCN------------------------RWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVL 581
LCN W+ +G R+ KK +F EP+ + D E VL
Sbjct: 664 LCNIVTVVPEGIVVFFSSFDYEEQVYGLWKTSGILDRIMKKKRIFREPRKNT--DVESVL 721
Query: 582 KHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKI------- 634
K Y +I SK K N L+T GA AV GKI
Sbjct: 722 KEYKENIDALSK---------KDPKQNILST---------SGAVLFAVVGGKISEGINLS 763
Query: 635 --------VVGIPFPNINDIQV--------------SLK--KKYNDT-----------YR 659
+VG+P+P+ +DI++ S+K K YND R
Sbjct: 764 DGMGRCIVMVGLPYPSPSDIELMERVKHIENLGNSNSIKSSKFYNDVPSGDVETGLEILR 823
Query: 660 SSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERF---QEERNRAHISKWL 716
S K G E+Y N +A+NQ+IGR IRH DY AI+L+D R+ +R+ +H + L
Sbjct: 824 SCKR---GKEYYENLCMKAVNQSIGRAIRHINDYAAILLVDVRYTSNSSKRSFSHPADKL 880
Query: 717 RKSIKQYDSFDASLEGLKSFFRDVKGW--VGKKM 748
K IK D AS E R + + V +KM
Sbjct: 881 PKWIK--DCLIASTENYGEVHRRLNQFFKVNRKM 912
Score = 53.5 bits (127), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 33/52 (63%), Gaps = 5/52 (9%)
Query: 27 FPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
FPY+PY Q FM + L++ ++LESPTGTGK+LS++C TL W
Sbjct: 14 FPYKPYSIQFDFMKALYEYLNKGGI-----SMLESPTGTGKTLSIICGTLQW 60
>gi|84627555|gb|AAI11734.1| DDX11 protein [Homo sapiens]
Length = 906
Score = 147 bits (372), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 172/740 (23%), Positives = 286/740 (38%), Gaps = 213/740 (28%)
Query: 146 IFYASRTHSQISQVISEYKKTAY--RVPMAVLASRKHYCTNKYVRD---KENIDEECKLL 200
I+Y SRTHSQ++Q + E KK+ + V + L SR++ C N+ V+ + I++ C +
Sbjct: 229 IYYCSRTHSQLAQFVHEVKKSPFGKDVRLVSLGSRQNLCVNEDVKSLGSVQLINDRCVDM 288
Query: 201 LGDRNL-------------------GCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVG 241
R+ CP F N H+ G L+ EV D+E L+ +G
Sbjct: 289 QRSRHEKKKGAEEEKPKRRRQEKQAACP-FYN-HEQMG--LLRDEALAEVKDMEQLLALG 344
Query: 242 QVVRGCSYYAARSMADDAQLVFCPYSYIINPVIR-------------------------G 276
+ R C YY +R AQLV PY +++ R G
Sbjct: 345 KEARACPYYGSRLAIPAAQLVVLPYQMLLHAATRQAAGIRLQDQVVIIDEAHNLIDTITG 404
Query: 277 AMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMEL----------------- 319
V++ G+ L + ++ + R + + LK + L
Sbjct: 405 MHSVEVSGSQLCQAHSQLLQYVERYGKRLKAKNLMYLKQILYLLEKFVAVLGGNIKQNPN 464
Query: 320 --------EQVCSVNPMIYQPLIE---------------MTQDLVGWIERRKATLAKRE- 355
++ ++N ++Q I+ +++ L G+ ER A + RE
Sbjct: 465 TQSLSQTGTELKTINDFLFQSQIDNINLFKVQRYCEKSMISRKLFGFTERYGAVFSSREQ 524
Query: 356 -----FQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMS 410
FQ F L+ LQ P A ++++ +P +
Sbjct: 525 PKLAGFQQF---------LQSLQPRTTEALAAP------------ADESQASVPQPAS-P 562
Query: 411 VITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFK 470
++ +EG ++LT +++G + Q +L + TL LNPAV F
Sbjct: 563 LMHIEGFLAALTTA-NQDGRVILSRQGSLSQ--------------STLKFLLLNPAVHFA 607
Query: 471 DVAELSLSIILTSGTLSPMNSFSSEL----GVQFGTCLE--APHVIDVDLQVLTSVISTG 524
V + ++++ GT+ P++ F +L GV+ +E HVI D +L VI G
Sbjct: 608 QVVKECRAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHVIPPD-NILPLVICIG 666
Query: 525 PDNYPLNASYKTADGYKLMEK----LCN------------------------RWRETGQW 556
N PL +++ D ++M++ LCN W + G
Sbjct: 667 VSNQPLEFTFQKRDLPQMMDEVGRILCNLCSVVSGGVVCFFPSYEYLRQVHAHWEKGGLL 726
Query: 557 SRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQ 616
L A+K +F EPK Q E VL Y I C Q
Sbjct: 727 GHLAARKKIFQEPKSAHQ--VEQVLLAYSRCIQ---ACG--------------------Q 761
Query: 617 ENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKKYNDTY--R 659
E GA L+V GK ++VG+PFPNI ++ K Y D R
Sbjct: 762 ERGPVTGALLLSVVGGKMSEGINFSDNLGRCVVMVGMPFPNIRSAELQEKMAYLDQTLPR 821
Query: 660 SSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKS 719
+ G N +A+NQ+IGR IRH+ D+ +I+LLD+R+ A + W+R
Sbjct: 822 APGQAPPGKALVENLCMKAVNQSIGRAIRHQKDFASIVLLDQRYARPPVLAKLPAWIRAR 881
Query: 720 IKQYDSFDASLEGLKSFFRD 739
++ +F ++ ++ F R+
Sbjct: 882 VEVKATFGPAIAAVQKFHRE 901
Score = 55.1 bits (131), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 40/68 (58%), Gaps = 5/68 (7%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
VG I FP+ PY Q FM + L+ A + G + ESPTGTGKSLSL+C L+W
Sbjct: 8 VGAIHFPFPFTPYSIQEDFMAELYRVLE-AGKIG----IFESPTGTGKSLSLICGALSWL 62
Query: 80 QNCKLKNQ 87
++ + K +
Sbjct: 63 RDFEQKKR 70
>gi|255723968|ref|XP_002546913.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240134804|gb|EER34358.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 812
Score = 147 bits (372), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 169/642 (26%), Positives = 273/642 (42%), Gaps = 116/642 (18%)
Query: 146 IFYASRTHSQISQVISEYKKTAY---------RVPMAVLASRKHYCTNKYVRDKEN---I 193
IFY+SRTHSQ++Q S+ + T + R L SRK C N+ VR K N +
Sbjct: 202 IFYSSRTHSQLNQFSSQLRLTHFEASFEELNERTKYIPLGSRKQLCINEKVRSKGNDQSM 261
Query: 194 DEECKLLLGDRNLGCPQF------KNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGC 247
++ C L + N GC NV K SL K + DIEDL +G +R C
Sbjct: 262 NDACIDLQRNSN-GCEFLPKNYMTSNVTKDFADLSLAK-----IRDIEDLGELGTELRIC 315
Query: 248 SYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDI 307
YY+ R + +++ PY I R + +D+K AI+I+DEAHNI D S+ I
Sbjct: 316 PYYSVRRGVELTEIISLPYQMIFQDTTRRILNLDVKDAIIIIDEAHNIIDTITSMYSLKI 375
Query: 308 DEDVLLK--------LQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREF--Q 357
D L K L L+++ S N + LI++ Q L+ ++ + E +
Sbjct: 376 TADQLNKVIKSLKVYLNKFLKKLNSGNRINLLKLIKICQLLLKFLNNNQDVRPGDEIKAE 435
Query: 358 HFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVITLEGL 417
F TGD + +S+ + A K TE+E S + T+
Sbjct: 436 DIFKDSTGDLVNIHKLDQFLSKS------KIAYKIESYIEKTENEYKSCSNPLLFTVINF 489
Query: 418 FSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSL 477
SLT S+ G D N + +++ L+P+ VFK++ + +
Sbjct: 490 LKSLTN-LSQEGKFFWD----------------KSNNSISINYMLLDPSAVFKEIVDQAK 532
Query: 478 SIILTSGTLSPMNSFSSEL-------GVQFGTCLEAPHVI-DVDLQV--------LTSVI 521
++L GT+ PM+ + L + TC HVI +L+V
Sbjct: 533 CVLLCGGTMEPMSDYVDYLFPSVSKEKINRFTC---GHVIPKENLEVFPVKQFKEFQFEF 589
Query: 522 STGPDNYP--LNASYKTA---------------DGYKLMEKLCNRWRETGQWSRLNAKKP 564
S N P LNA + YK + ++ W+ G S + K
Sbjct: 590 SFDKRNNPVQLNALGRFIIEICQRVPYGLVIFFPSYKYLNQVLESWK-NGILSTIECYKS 648
Query: 565 LFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGA 624
+F EP S+ +F L Y + I+ K A++ + + + + +
Sbjct: 649 VFQEPSDPSKVEF--TLGQYASVINTERKGAIL------------FSVVGGKMSEGINFS 694
Query: 625 SFLAVCRGKIVVGIPFPNINDIQVSLKKKYNDT--YRSSKNLLSGNE----WYCNQAFRA 678
LA R ++VG+P+PN ++ K K+ +T ++ + E +Y N RA
Sbjct: 695 DDLA--RAVVMVGLPYPNAYSGEMVAKMKFIETNVLQNGGTIQQAKEKSRNYYENLCMRA 752
Query: 679 LNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSI 720
+NQ+IGR IRH DY I L+D+RF+ R ++ +S+W+++ I
Sbjct: 753 VNQSIGRSIRHIKDYSTIYLIDKRFEYPRIQSKLSQWVKQRI 794
Score = 63.5 bits (153), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 45/75 (60%), Gaps = 5/75 (6%)
Query: 22 GIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQN 81
G + PY+PY Q+ M + T+D DG+ L ESPTGTGK+LS++CST+ W +N
Sbjct: 7 GEKYNHPYEPYDIQVQLMDAIYHTID----DGYKIGLFESPTGTGKTLSIICSTMTWLRN 62
Query: 82 CKLKNQL-ANISHSK 95
K N ++SH K
Sbjct: 63 YKKNNTFQESMSHDK 77
>gi|332232623|ref|XP_003265503.1| PREDICTED: probable ATP-dependent RNA helicase DDX11 isoform 4
[Nomascus leucogenys]
Length = 880
Score = 147 bits (372), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 172/725 (23%), Positives = 290/725 (40%), Gaps = 183/725 (25%)
Query: 146 IFYASRTHSQISQVISEYKKTAY--RVPMAVLASRKHYCTNKYVRD---KENIDEECKLL 200
I+Y SRTHSQ++Q + E KK+ + V + L SR++ C N+ V+ + I++ C +
Sbjct: 203 IYYCSRTHSQLAQFVHEVKKSPFGKDVRLVSLGSRQNLCVNEDVKSLGSVQLINDRCVDM 262
Query: 201 LGDRNL-------------------GCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVG 241
R+ CP F N H+ G L+ +V DIE L+ +G
Sbjct: 263 QRSRHEKKKGAEEEKPKRRRQEKQAACP-FYN-HEQMG--LLRDEALADVKDIEQLLALG 318
Query: 242 QVVRGCSYYAARSMADDAQLVFCPYSYIINPV-------------------------IRG 276
+ R C YY +R AQLV PY +++ I G
Sbjct: 319 KEARACPYYGSRLAIPAAQLVVLPYQMLLHAATRQAAGIRLQDQVVIIDEAHNLIDTITG 378
Query: 277 AMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMEL----------------- 319
V++ G+ L + ++ + R + + LK + L
Sbjct: 379 MHSVEVSGSQLCQAHSQLLQYMERYGKRLKAKNLMYLKQILYLLEKFVAVLGGNIKQNPN 438
Query: 320 --------EQVCSVNPMIYQPLIE---------------MTQDLVGWIERRKATLAKRE- 355
++ ++N ++Q I+ +++ L G+ ER A L+ RE
Sbjct: 439 TQSLSQTGTELKTINDFLFQSQIDNINLFKVQRYCEKSMISRKLFGFTERYGAVLSSREQ 498
Query: 356 -----FQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMS 410
FQ F L+ LQ T+A+ D
Sbjct: 499 PKLAGFQQF---------LQSLQPRT-------------TEALAAPADESQASAPRPASP 536
Query: 411 VITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFK 470
++ +EG ++LT +++G + Q +L + TL LNPAV F
Sbjct: 537 LMHIEGFLAALTTA-NQDGRVILSRQGSLSQ--------------STLKFLLLNPAVHFA 581
Query: 471 DVAELSLSIILTSGTLSPMNSFSSEL----GVQFGTCLE--APHVIDVDLQVLTSVISTG 524
V + ++++ GT+ P++ F +L GV+ +E HVI D +L VI +G
Sbjct: 582 QVVKECRAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHVIPPD-NILPLVICSG 640
Query: 525 PDNYPLNASYKTADGYKLMEK----LCN------------------------RWRETGQW 556
N PL +++ + ++M++ LCN W + G
Sbjct: 641 ISNQPLEFTFQKRELPQMMDEAGRILCNLCGVVPGGVVCFFPSYEYLRQVHAHWEKGGLL 700
Query: 557 SRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQ 616
RL A+K +F EPK Q E VL Y I QG C ++R + G L+ + +
Sbjct: 701 DRLAARKKIFQEPKSAHQ--VEQVLLAYSRCI-QG--CG---QERGRVTGALLLSVVGGK 752
Query: 617 ENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYNDTY--RSSKNLLSGNEWYCNQ 674
+ + L C ++VG+PFPNI ++ K Y D R+ G N
Sbjct: 753 MSEGINFSDNLGRC--VVMVGMPFPNIRSPELQEKMAYLDQTLPRAPGQAPPGKALVENL 810
Query: 675 AFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLK 734
+A+NQ+IGR IRH+ D+ +I+LLD+R+ A + W+R + +F ++ ++
Sbjct: 811 CMKAVNQSIGRAIRHQKDFASIVLLDQRYARPPVLAKLPAWIRARVDVKSTFGPAIAAVQ 870
Query: 735 SFFRD 739
F R+
Sbjct: 871 KFHRE 875
>gi|429854790|gb|ELA29777.1| ATP-dependent RNA helicase chl1 [Colletotrichum gloeosporioides
Nara gc5]
Length = 858
Score = 147 bits (371), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 164/705 (23%), Positives = 288/705 (40%), Gaps = 142/705 (20%)
Query: 146 IFYASRTHSQISQVISEYKKTAY--RVPMAV-------------------LASRKHYCTN 184
I+Y SRTHSQ++Q I E ++ A+ +P +V L+SR+ C N
Sbjct: 177 IYYTSRTHSQLTQFIHELRRPAFPSSMPPSVKPNDSEDARPDKEPVKHLPLSSRQKLCIN 236
Query: 185 KYVRDKENI---DEECKLLLGDRNLG-CPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNV 240
V I ++ C L + CP N ++ + + DIEDL ++
Sbjct: 237 PSVAKLGTISAINDRCSELQKPKAKDKCPYTLNEDNIKQTHQFRDTAHATLPDIEDLYHL 296
Query: 241 GQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIAR 300
G+ + C YYA+R+ A+++ PY ++ R A+ + ++G ++I+DEAHNI D
Sbjct: 297 GKKLEVCPYYASRAAIAGAEIITLPYPLLLQKNARDALGIKLEGNVVIVDEAHNIMDAVA 356
Query: 301 DAGSVDIDEDVLLKLQMEL--------EQVCSVNPMIYQPLIEMTQDLVGWIE---RRKA 349
+ + +I L + + L +++ N ++ + + + L W+ KA
Sbjct: 357 NVYASEIKLTELRRARQMLGVYVKRFGKKLKGENRVMVGQVGRVIEGLTEWMSGAMTLKA 416
Query: 350 TLAKREFQHFFSCWTGD-----KALRELQEANISRQCFPILLECATK-----AIKEATDT 399
+ + C D K ++ +QE+ ++ + + + A K +
Sbjct: 417 PHGIVDSKVLLRCKGVDQINLFKLIQYIQESKLAYKIESYVAHVEEEIAQANAGKAPPRS 476
Query: 400 ESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLS 459
+ + H+ +I+L L S F+ + S+ D QL S
Sbjct: 477 STPVLHILSSFLISLTNLSSEGRIFYEKTSSNSPDIQL---------------------S 515
Query: 460 LWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFG----TCLEAPHVIDVDLQ 515
L+P F +A + ++IL GT+SP + L T L HVI
Sbjct: 516 YLLLSPTHAFSSIATSARAVILAGGTMSPFEDYKDHLFPYLSDSKLTTLSCGHVIPPSNL 575
Query: 516 VLTSVISTGPD-NYPLNASYK-------------------------TADG-------YKL 542
+ ++ T P N ++++++ DG Y
Sbjct: 576 CVWTLAGTKPGPNRDVSSTFEFSFQRRSDKTMVSQLGLAILNICNVVPDGVVVFFPSYGY 635
Query: 543 MEKLCNRW--RETGQ----WSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSI-SQGSKCA 595
++++ W + G+ W R+ +K F E +GGS ++ VL+ Y +I G CA
Sbjct: 636 LDEVVAVWETKSPGESKSIWDRMRERKEAFKETRGGSSDE---VLEAYSKAILGDGEPCA 692
Query: 596 VVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYN 655
K G L+ + + + + L C I++G+P+PNIN + K +Y
Sbjct: 693 GAAPKP---RGAILLSVVGGKMSEGINFSDRLGRC--VIIIGLPYPNINSPEWKAKTEYI 747
Query: 656 DTYR-------SSKNLLSGNE-----------WYCNQAFRALNQAIGRCIRHRFDYGAII 697
+T S+ +S E +Y N RA+NQ+IGR IRH+ DY AI+
Sbjct: 748 ETTTVQRLTDASASTRISREEAIVVAKQAARDFYENACMRAVNQSIGRAIRHQGDYAAIV 807
Query: 698 LLDERFQEERNRAHISKWLRKSIKQYDSFDASLE----GLKSFFR 738
L+D R+ +R R + W+R + DS + L L FFR
Sbjct: 808 LVDRRYGTDRIRGKLPGWIRGGMNN-DSHEKGLPQLMGALSGFFR 851
Score = 45.8 bits (107), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 28/35 (80%)
Query: 57 ALLESPTGTGKSLSLLCSTLAWQQNCKLKNQLANI 91
+LESPTGTGKSLSL+C++L W +N +++ A++
Sbjct: 16 GILESPTGTGKSLSLICASLTWLRNQRIEEHEASL 50
>gi|321248407|ref|XP_003191119.1| CHL1 helicase [Cryptococcus gattii WM276]
gi|317457586|gb|ADV19332.1| CHL1 helicase, putative [Cryptococcus gattii WM276]
Length = 854
Score = 147 bits (370), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 175/705 (24%), Positives = 283/705 (40%), Gaps = 154/705 (21%)
Query: 146 IFYASRTHSQISQVISEYKKTAYR-----------------VPMAVLASRKHYCTNKYVR 188
++Y SRTH+Q+ Q+ SE KT++ V + L SRK C N+ VR
Sbjct: 190 VYYTSRTHTQLRQLTSELLKTSFANYDPMPESPSAEAPSHGVSLVPLGSRKQLCINEKVR 249
Query: 189 D--KENIDEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGG--CHEVHDIEDLVNVGQVV 244
++ DE N C + K L V DIED+V VG+
Sbjct: 250 ALARKGGDERM-------NEACLDMQKPAKTDEIMMLDARDMILTSVKDIEDIVAVGKKS 302
Query: 245 RGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGS 304
C YYA R +Q+V PY+ ++ R A+ +++K ++++DEAHN+ D S
Sbjct: 303 CVCPYYATRKAVKQSQIVTLPYNLLLQKNAREALGINLKNQVVVIDEAHNLIDTILSIYS 362
Query: 305 VDIDE----DVLLKLQMELE----QVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREF 356
+ + L +L+ L+ ++ S + + Q ++ + Q L+ + +
Sbjct: 363 TTLTSVNLANALSQLRQYLQRFKSRLKSKHSLWIQQVLSLLQGLI--------RVCDKFI 414
Query: 357 QHFFSCWTGDKAL----RELQEANI--------SRQCFPILLECATKAIKEATDTESELP 404
Q S GDK + E+ +AN S Q P+ L K K A
Sbjct: 415 QDSKSQAKGDKPVGMPKTEVIDANTLMRRIGGGSDQVNPVELVAYLKESKLARKISGFSE 474
Query: 405 HLSGMSVITLEGLFSSLTYFFSRNGS----H-VSDYQLALQKYIKRDSKNPGGNWTHTLS 459
H+ + + + S T +R+ S H V + L+L D+K+ G
Sbjct: 475 HVVEQASLKNAKIPRSAT---ARHASITAFHIVESFLLSLV-----DAKDDGRILLSIDD 526
Query: 460 LWCLNPAVVFK-----------DVAELSLSIILTSGTLSPMNSFSSELGVQFGT----CL 504
L P VV K +V E + S++L GT+ P+ F +L L
Sbjct: 527 LNKSEPVVVIKYILLNPSERFKEVIEDARSVVLAGGTMEPITDFLQQLFPSIPKDRLLTL 586
Query: 505 EAPHVIDVDLQVLTSVISTGPDNYPLNASYK---------------------TADG---- 539
HVI + +LT V+S GP + DG
Sbjct: 587 SCSHVIPKE-NLLTQVVSVGPRKSEFEFKFGNRNDEALLTDLGAVLQAIIGVVPDGVVVF 645
Query: 540 ---YKLMEKLCNRWRETGQWSRLNAKK-PLFVEPKGGSQEDFEIVLKHYYNSISQGSKCA 595
Y ++K+ W ++G RL +K LF EP+ + D E +L+ Y +I+ C
Sbjct: 646 LPSYAFLDKVRAFWMKSGLLQRLGERKQQLFYEPQ--TSGDVETILRDYALAITS---CH 700
Query: 596 VVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGK-------------------IVV 636
T + + + K GA AV GK I+V
Sbjct: 701 A---------------TSAAGQKSRKTGALMFAVVGGKLSEGASCCINFSDNLGRCVIMV 745
Query: 637 GIPFPNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAI 696
G+PF N+ +++ + +Y +T + S E Y N RA+NQ+IGR IRH DY I
Sbjct: 746 GLPFANVGSVELRERMQYVETIPGAGQGAS-REMYENLCMRAVNQSIGRAIRHANDYATI 804
Query: 697 ILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFRDVK 741
+L+D+R+ R R + KW+ + ++ F G+ +FF++ K
Sbjct: 805 LLVDKRYANPRIRNKLPKWIGEDVRIPQGFGGVARGVATFFKEKK 849
>gi|100913202|ref|NP_085911.2| probable ATP-dependent RNA helicase DDX11 isoform 1 [Homo sapiens]
Length = 906
Score = 147 bits (370), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 174/741 (23%), Positives = 289/741 (39%), Gaps = 215/741 (29%)
Query: 146 IFYASRTHSQISQVISEYKKTAY--RVPMAVLASRKHYCTNKYVRD---KENIDEECKLL 200
I+Y SRTHSQ++Q + E KK+ + V + L SR++ C N+ V+ + I++ C +
Sbjct: 229 IYYCSRTHSQLAQFVHEVKKSPFGKDVRLVSLGSRQNLCVNEDVKSLGSVQLINDRCVDM 288
Query: 201 LGDRNL-------------------GCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVG 241
R+ CP F N H+ G L+ EV D+E L+ +G
Sbjct: 289 QRSRHEKKKGAEEEKPKRRRQEKQAACP-FYN-HEQMG--LLRDEALAEVKDMEQLLALG 344
Query: 242 QVVRGCSYYAARSMADDAQLVFCPYSYIINPV-------------------------IRG 276
+ R C YY +R AQLV PY +++ I G
Sbjct: 345 KEARACPYYGSRLAIPAAQLVVLPYQMLLHAATRQAAGIRLQDQVVIIDEAHNLIDTITG 404
Query: 277 AMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMEL----------------- 319
V++ G+ L + ++ + R + + LK + L
Sbjct: 405 MHSVEVSGSQLCQAHSQLLQYVERYGKRLKAKNLMYLKQILYLLEKFVAVLGGNIKQNPN 464
Query: 320 --------EQVCSVNPMIYQPLIE---------------MTQDLVGWIERRKATLAKRE- 355
++ ++N ++Q I+ +++ L G+ ER A + RE
Sbjct: 465 TQSLSQTGTELKTINDFLFQSQIDNINLFKVQRYCEKSMISRKLFGFTERYGAVFSSREQ 524
Query: 356 -----FQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMS 410
FQ F L+ LQ T+A+ D ES+ L S
Sbjct: 525 PKLAGFQQF---------LQSLQPRT-------------TEALAAPAD-ESQASTLRPAS 561
Query: 411 -VITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVF 469
++ ++G ++LT +++G + Q +L + TL LNPAV F
Sbjct: 562 PLMHIQGFLAALTTA-NQDGRVILSRQGSLSQ--------------STLKFLLLNPAVHF 606
Query: 470 KDVAELSLSIILTSGTLSPMNSFSSEL----GVQFGTCLE--APHVIDVDLQVLTSVIST 523
V + ++++ GT+ P++ F +L GV+ +E HVI D +L VI +
Sbjct: 607 AQVVKECRAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHVIPPD-NILPLVICS 665
Query: 524 GPDNYPLNASYKTADGYKLMEK----LCN------------------------RWRETGQ 555
G N PL +++ + ++M++ LCN W + G
Sbjct: 666 GISNQPLEFTFQKRELPQMMDEVGRILCNLCGVVPGGVVCFFPSYEYLRQVHAHWEKGGL 725
Query: 556 WSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIES 615
RL A+K +F EPK Q E VL Y I C
Sbjct: 726 LGRLAARKKIFQEPKSAHQ--VEQVLLAYSRCIQ---ACG-------------------- 760
Query: 616 QENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKKYNDTY-- 658
QE GA L+V GK ++VG+PFPNI ++ K Y D
Sbjct: 761 QERGQVTGALLLSVVGGKMSEGINFSDNLGRCVVMVGMPFPNIRSAELQEKMAYLDQTLP 820
Query: 659 RSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRK 718
R+ G N +A+NQ+IGR IRH+ D+ +++LLD+R+ A + W+R
Sbjct: 821 RAPGQAPPGKALVENLCMKAVNQSIGRAIRHQKDFASVVLLDQRYARPPVLAKLPAWIRA 880
Query: 719 SIKQYDSFDASLEGLKSFFRD 739
++ +F ++ ++ F R+
Sbjct: 881 RVEVKATFGPAIAAVQKFHRE 901
Score = 55.1 bits (131), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 40/68 (58%), Gaps = 5/68 (7%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
VG I FP+ PY Q FM + L+ A + G + ESPTGTGKSLSL+C L+W
Sbjct: 8 VGAIHFPFPFTPYSIQEDFMAELYRVLE-AGKIG----IFESPTGTGKSLSLICGALSWL 62
Query: 80 QNCKLKNQ 87
++ + K +
Sbjct: 63 RDFEQKKR 70
>gi|84997393|ref|XP_953418.1| helicase [Theileria annulata strain Ankara]
gi|65304414|emb|CAI76793.1| helicase, putative [Theileria annulata]
Length = 951
Score = 147 bits (370), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 103/307 (33%), Positives = 161/307 (52%), Gaps = 29/307 (9%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLA-- 77
+ GI V+FP+ PY Q +M VI T+ ++ +ALLESPTGTGK+LSL+CSTLA
Sbjct: 11 IDGIDVKFPFYPYRCQRSYMEHVIKTIKESK-----NALLESPTGTGKTLSLICSTLATL 65
Query: 78 -WQQNCKLKNQLANISHS-KPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNN 135
W + K + + K E V + G PE + +++
Sbjct: 66 LWNKMVKKVKKTKDDVVKPKTVKEEVKEEEIEYGTVKPEPVEEDLDKKIVDYRPLSVLDD 125
Query: 136 KNVKKKMTP---TIFYASRTHSQISQVISEYKKTAYR-------VPMAVLASRKHYCTNK 185
+ K ++ P I YASRTHSQ+ QV+ E +KT Y + +LASR C N
Sbjct: 126 EK-KSEIKPERIKIMYASRTHSQLKQVVGEVEKTEYSRQFNLRGLKGVLLASRDQLCINP 184
Query: 186 YVRDK---ENIDEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQ 242
+R K E + CK L+ +R C F + +RG + ++ + DIED+V G+
Sbjct: 185 -LRGKMTGEVLANFCKALVQERK--CEYF---NTMRGDKNSKQFQFERLMDIEDMVETGK 238
Query: 243 VVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDA 302
C Y++ + + A L+ PY+Y+++P IR A+++DI+ +IL++DEAHN E +A +
Sbjct: 239 NKHFCPYFSVKEGQEHADLILLPYNYLLSPDIRDAVDIDIRDSILVIDEAHNAEQVAEEG 298
Query: 303 GSVDIDE 309
S +I +
Sbjct: 299 ASFEIKQ 305
Score = 121 bits (303), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 96/330 (29%), Positives = 144/330 (43%), Gaps = 65/330 (19%)
Query: 460 LW--CLNPAVVFKDVAEL-SLSIILTSGTLSPMNSFSSELG---VQFGTCLEAPHVIDVD 513
W CL P F + + SIILTSGTL P++ LG V+F L+ HVID
Sbjct: 534 FWFKCLQPVPTFVRLKNAGARSIILTSGTLGPLDVLERHLGGGQVKFDIKLQNEHVIDPS 593
Query: 514 LQVLTSVISTGPDNYPLNASYKTAD----------------------------GYKLMEK 545
+ S+ D L++++ T + Y +M
Sbjct: 594 RVWVGSISGNAEDPNMLSSTFNTRNKMNYITELGNAVVSFVKNVPAGVLVFFCSYNVMNY 653
Query: 546 LCNRWRETGQWSRLNAKKPLFVEPKGGSQ-EDFEIV-------LKHYYNSISQGSKCAVV 597
+ W++ G +S++ K +++E + ED ++V Y +I +G+
Sbjct: 654 TTSVWKKIGIYSKIEMYKKVYLEARPVENPEDSDVVPVTTMDIFNRYKENIDKGNGSVFF 713
Query: 598 RKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYND- 656
R + D + CRG V GIP+P+ D +LK Y D
Sbjct: 714 AICRGRLAEGIDFSD---------------DYCRGIFVCGIPYPSRFDDNTALKMDYLDK 758
Query: 657 ----TYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHI 712
TY NL N+WY +QA RA+NQA+GR IRH DYGAI+L D RF+ + ++
Sbjct: 759 LGHKTYEKG-NL--ANDWYTSQAIRAINQAVGRSIRHNRDYGAILLADYRFKYVPVKPNL 815
Query: 713 SKWLRKSIKQYDSFDASLEGLKSFFRDVKG 742
SKW+ +K Y+ D E L SFF+ +G
Sbjct: 816 SKWVLNRLKLYNKMDDCTESLSSFFKQFEG 845
>gi|222630644|gb|EEE62776.1| hypothetical protein OsJ_17579 [Oryza sativa Japonica Group]
Length = 774
Score = 146 bits (369), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 171/688 (24%), Positives = 272/688 (39%), Gaps = 174/688 (25%)
Query: 142 MTPTIFYASRTHSQISQVISEYKKT--AYRVPMAVLASRKHYCTNKYVR---DKENIDEE 196
+TP +F+ SRTHSQ+SQ + E KKT +R+ L SRK+ C NK V I+E
Sbjct: 87 VTPKVFFTSRTHSQLSQFVGELKKTEFGWRLRTVCLGSRKNLCINKDVLKLGSANRINER 146
Query: 197 C-------------------KLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVH----- 232
C K+ + GCP + RG LQK EV
Sbjct: 147 CLELQKSKKSSKTKVEGDNRKVCQSKTSCGCPMIRK----RG---LQKEFKSEVSEQGAL 199
Query: 233 DIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEA 292
DIEDL +G+ + C YY AR M A LV PY ++ R ++ +++K +++I+DEA
Sbjct: 200 DIEDLAQLGKKIGTCPYYGARDMVRTADLVVLPYQSLLLKSARESLGLNLKNSVVIIDEA 259
Query: 293 HNIEDIARDAGSVDIDED----VLLKLQMELEQVCSV----NPMIYQPLIEMTQDLVGWI 344
HN+ D + I +L L+ L + SV N Q L +T+ + +
Sbjct: 260 HNLADSLTSMYNSKITSSQLNAILSHLEAYLNRFQSVLGAGNRRYIQTLTVLTRSFLRVL 319
Query: 345 ERRK---ATLAKREFQHFFSCWTGD-----KALRELQEANISRQCFPILLECATKAIKEA 396
+ T+ F D K + ++E+NI + + +
Sbjct: 320 TSNQDDACTMTSMTINQFLFSLDIDNINIVKLCQYVKESNIIHK-----VSGYANKLNIN 374
Query: 397 TDTESELPHL----SGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGG 452
D + L H G S+ + + L L + N + + I K G
Sbjct: 375 QDGVNHLSHQQQYDEGSSIASFQTLADFLRSLLNCNDN---------GRIIVARKKFSGQ 425
Query: 453 NWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSEL-------GVQFGTCLE 505
L L +F ++ + ++IL GTL P+ L ++F TC
Sbjct: 426 PEDAYLKFVMLCAEKIFLEITCDAYAVILAGGTLQPIEETRLRLFPNLPPSDIKFFTC-- 483
Query: 506 APHVIDVDLQVLTSVISTGPDNYPLNASYKTADGYKLMEK----LCN------------- 548
H++ + +L ++ GP + SY + + ++E+ LCN
Sbjct: 484 -NHIVPPE-SILPIAVTRGPSGKAFDFSYSSRSSHTMIEELGRFLCNVVTTVPEGVVMFF 541
Query: 549 -----------RWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVV 597
W +G S+++ KK +F EPK + D E+ L Y +I SK
Sbjct: 542 ASYEYERFVYDAWAASGMISKISKKKHVFREPK--NSVDVEMTLNKYKEAIQSCSK---- 595
Query: 598 RKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKI---------------VVGIPFPN 642
S ++ GA LAV GKI +VG+P+P+
Sbjct: 596 -----------------SSQDTGVTGALLLAVVGGKISEGINFSDGMGRCVVMVGLPYPS 638
Query: 643 INDIQVSLKKKY-----------NDTYRSSK-----------NLL-----SGNEWYCNQA 675
+D++++ KY D SSK ++L G E+Y N
Sbjct: 639 PSDVELTETIKYIENISKPVLVGGDNSSSSKYDDECKLQPGFDILRKCNKGGREYYENLC 698
Query: 676 FRALNQAIGRCIRHRFDYGAIILLDERF 703
+A+NQ+IGR IRH DY A++L+D R+
Sbjct: 699 MKAVNQSIGRAIRHANDYAAMLLVDSRY 726
>gi|380420358|ref|NP_001244074.1| probable ATP-dependent RNA helicase DDX11 isoform 4 [Homo sapiens]
gi|29476793|gb|AAH50069.1| DDX11 protein [Homo sapiens]
Length = 880
Score = 146 bits (369), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 174/741 (23%), Positives = 289/741 (39%), Gaps = 215/741 (29%)
Query: 146 IFYASRTHSQISQVISEYKKTAY--RVPMAVLASRKHYCTNKYVRD---KENIDEECKLL 200
I+Y SRTHSQ++Q + E KK+ + V + L SR++ C N+ V+ + I++ C +
Sbjct: 203 IYYCSRTHSQLAQFVHEVKKSPFGKDVRLVSLGSRQNLCVNEDVKSLGSVQLINDRCVDM 262
Query: 201 LGDRNL-------------------GCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVG 241
R+ CP F N H+ G L+ EV D+E L+ +G
Sbjct: 263 QRSRHEKKKGAEEEKPKRRRQEKQAACP-FYN-HEQMG--LLRDEALAEVKDMEQLLALG 318
Query: 242 QVVRGCSYYAARSMADDAQLVFCPYSYIINPV-------------------------IRG 276
+ R C YY +R AQLV PY +++ I G
Sbjct: 319 KEARACPYYGSRLAIPAAQLVVLPYQMLLHAATRQAAGIRLQDQVVIIDEAHNLIDTITG 378
Query: 277 AMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMEL----------------- 319
V++ G+ L + ++ + R + + LK + L
Sbjct: 379 MHSVEVSGSQLCQAHSQLLQYVERYGKRLKAKNLMYLKQILYLLEKFVAVLGGNIKQNPN 438
Query: 320 --------EQVCSVNPMIYQPLIE---------------MTQDLVGWIERRKATLAKRE- 355
++ ++N ++Q I+ +++ L G+ ER A + RE
Sbjct: 439 TQSLSQTGTELKTINDFLFQSQIDNINLFKVQRYCEKSMISRKLFGFTERYGAVFSSREQ 498
Query: 356 -----FQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMS 410
FQ F L+ LQ T+A+ D ES+ L S
Sbjct: 499 PKLAGFQQF---------LQSLQPRT-------------TEALAAPAD-ESQASTLRPAS 535
Query: 411 -VITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVF 469
++ ++G ++LT +++G + Q +L + TL LNPAV F
Sbjct: 536 PLMHIQGFLAALTTA-NQDGRVILSRQGSLSQ--------------STLKFLLLNPAVHF 580
Query: 470 KDVAELSLSIILTSGTLSPMNSFSSEL----GVQFGTCLE--APHVIDVDLQVLTSVIST 523
V + ++++ GT+ P++ F +L GV+ +E HVI D +L VI +
Sbjct: 581 AQVVKECRAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHVIPPD-NILPLVICS 639
Query: 524 GPDNYPLNASYKTADGYKLMEK----LCN------------------------RWRETGQ 555
G N PL +++ + ++M++ LCN W + G
Sbjct: 640 GISNQPLEFTFQKRELPQMMDEVGRILCNLCGVVPGGVVCFFPSYEYLRQVHAHWEKGGL 699
Query: 556 WSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIES 615
RL A+K +F EPK Q E VL Y I C
Sbjct: 700 LGRLAARKKIFQEPKSAHQ--VEQVLLAYSRCIQ---ACG-------------------- 734
Query: 616 QENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKKYNDTY-- 658
QE GA L+V GK ++VG+PFPNI ++ K Y D
Sbjct: 735 QERGQVTGALLLSVVGGKMSEGINFSDNLGRCVVMVGMPFPNIRSAELQEKMAYLDQTLP 794
Query: 659 RSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRK 718
R+ G N +A+NQ+IGR IRH+ D+ +++LLD+R+ A + W+R
Sbjct: 795 RAPGQAPPGKALVENLCMKAVNQSIGRAIRHQKDFASVVLLDQRYARPPVLAKLPAWIRA 854
Query: 719 SIKQYDSFDASLEGLKSFFRD 739
++ +F ++ ++ F R+
Sbjct: 855 RVEVKATFGPAIAAVQKFHRE 875
>gi|320581727|gb|EFW95946.1| ATP-dependent RNA helicase Chl1, putative [Ogataea parapolymorpha
DL-1]
Length = 802
Score = 146 bits (368), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 157/673 (23%), Positives = 274/673 (40%), Gaps = 142/673 (21%)
Query: 146 IFYASRTHSQISQVISEYKKTAY---------RVPMAVLASRKHYCTNKYV---RDKENI 193
IF++SRTHSQ+SQ + + T + + L SRK C N+ V +D + I
Sbjct: 188 IFFSSRTHSQLSQFGQQLRLTHFPSSLESVEEKTKYLALGSRKQLCINEKVSSLKDVQQI 247
Query: 194 DEECKLLL--GDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYA 251
+E C L D GC + E+ DIE+L +G R C YY+
Sbjct: 248 NEACLELQRKKDGEKGCSYMPRPETEDLTTQFRDLTFSEIRDIEELHEIGSHYRVCPYYS 307
Query: 252 ARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDV 311
R + A++V PY ++ R + +D+K +I+++DEAHN+ D S I +
Sbjct: 308 LRRGMEIAEIVSMPYQLLLQKSTRQVLGLDLKNSIVVIDEAHNLLDTISSLNSATISLNE 367
Query: 312 LLKLQMELE--------QVCSVNPMIYQPLIEMTQDLVGWIER---RKATLAKREFQHFF 360
LLK++ L+ ++ + N + L +M L ++ + +KA + F
Sbjct: 368 LLKVRKALKSYTTKFASRLNAGNRINLAKLSKMITILAKFLMKDGEKKAAGTEINVTSIF 427
Query: 361 SCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVITLEGLFSS 420
TGD E +++ LE + I E + ++ P L + LE L +
Sbjct: 428 DDTTGDLLNFHSLETYLTKSKIAYKLESYMEKIDE--NYKAGTPILFKIRSF-LECLSNP 484
Query: 421 LTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSII 480
S++G D RDS + + L+P+ F+DV E +I
Sbjct: 485 -----SKSGKLFYD----------RDSADGIA-----MKYLLLDPSEAFRDVVEECKCVI 524
Query: 481 LTSGTLSPMNSF--------------------------------SSELGVQFGTCLEA-- 506
L GT+ P++ F S GV+F +
Sbjct: 525 LAGGTMEPISDFINFLVPYVESKQIKHFSCDHIIPASNLDVYPVKSRQGVEFEFSFDKRN 584
Query: 507 -PHVIDVDLQVLTSVISTGPDNYPLNASYKTADGYKLMEKLCNRWRETGQWSRLNAKKPL 565
+ID + + +++ PD + YK +++L W+++G + R+N K +
Sbjct: 585 DKKMIDALGETILEMVAVVPDGMVV-----FFPSYKYLDQLVELWKKSGHYHRINQVKTI 639
Query: 566 FVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGAS 625
+ E + + ++ VL++Y S+C + R +GA
Sbjct: 640 YTESRENAVDN---VLQNY-------SQCILER-----------------------RGAV 666
Query: 626 FLAVCRGKI---------------VVGIPFPNINDIQVSLKKKYNDTYR------SSKNL 664
AV GK+ +VG+PFPN+ + K+KY ++ L
Sbjct: 667 LFAVVGGKMSEGINFSDELARAVAMVGLPFPNLMSGDLIAKRKYVESKTIEMGGSREDAL 726
Query: 665 LSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYD 724
+ E+Y N +A+NQ++GR IR+ DY I L+D R++ + +S W++K I++
Sbjct: 727 ANAREFYENICMKAVNQSVGRAIRNIRDYSVIYLIDVRYERPHIQKKLSGWIKKRIERGG 786
Query: 725 SFDASLEGLKSFF 737
++ K FF
Sbjct: 787 ELSEVIKQTKRFF 799
Score = 51.6 bits (122), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
Query: 28 PYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCK 83
PY PY Q+ M + TL + G + ESPTGTGK+LS++CST+ W + K
Sbjct: 14 PYTPYDVQVKLMEAIYDTLTGNYKVG----IFESPTGTGKTLSIICSTMTWLRELK 65
>gi|76155593|gb|AAX26884.2| SJCHGC09335 protein [Schistosoma japonicum]
Length = 412
Score = 145 bits (367), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/314 (30%), Positives = 155/314 (49%), Gaps = 32/314 (10%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ G++++FPYQPY QL +M +V+ +L++ + HA+LESPTGTGK+L LLC++LAW
Sbjct: 6 IDGVEIDFPYQPYDCQLEYMTKVLLSLNQGK-----HAILESPTGTGKTLCLLCASLAWL 60
Query: 80 QN----CKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNN 135
+L + + S D + N N Q+ N
Sbjct: 61 DKQIRPAELISTIDTKHQSGLGNCLTCDDIGNHDD--------------NKLFRQIHFTN 106
Query: 136 KNVKKKMTPTIFYASRTHSQISQVISEYKKTAY-RVPMAVLASRKHYCTNKYVRDKENID 194
N K I +ASRTHSQ++Q I+ K T Y + ++V+ SR C V ++
Sbjct: 107 LN-KVNNACKIIFASRTHSQLAQAINALKGTVYSKSNISVVGSRDQLCLLTEVMSLDSNS 165
Query: 195 EE---CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYA 251
+ C++ + + + ++ + L + DIEDL N GQ R C Y+
Sbjct: 166 AKIYACRMRVKRKRVNISGISTLNAM----ILANLKLEGIVDIEDLSNFGQKTRCCPYFI 221
Query: 252 ARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDV 311
+R + D++L+F PY+Y+++ IR ++++ +I DEAHNIE + DA SV + +
Sbjct: 222 SRELKTDSRLIFMPYNYLLDSRIRTLYNINLENTAVIFDEAHNIEQVCEDASSVTLSSAL 281
Query: 312 LLKLQMELEQVCSV 325
L + VC V
Sbjct: 282 LASAIEHVRCVCEV 295
>gi|196005263|ref|XP_002112498.1| hypothetical protein TRIADDRAFT_25417 [Trichoplax adhaerens]
gi|190584539|gb|EDV24608.1| hypothetical protein TRIADDRAFT_25417 [Trichoplax adhaerens]
Length = 899
Score = 145 bits (367), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 165/703 (23%), Positives = 297/703 (42%), Gaps = 160/703 (22%)
Query: 146 IFYASRTHSQISQVISEYKKTAY--RVPMAVLASRKHYCTNKYV---RDKENIDEEC--- 197
I+Y SRTHSQ++Q I E KK + + + VL SR++ C N V + I+++C
Sbjct: 208 IYYCSRTHSQLAQFIGEVKKCNFADSIRLVVLGSRQNLCINPSVVKLKSVNKINDKCLEM 267
Query: 198 -------KLLLGDRNLGCPQFKNVHKVRGHPSLQKGG--------CHEVHDIEDLVNVGQ 242
K+ + ++ + + + K+ G P L ++HDIE++V+ G
Sbjct: 268 QKRKKEEKVTVAHKD--SNKKRKISKLSGCPYLNIASRNDLRDYILADIHDIEEVVHFGT 325
Query: 243 VVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDA 302
++ C YY AR+ A +V PY+ +++ R A + + G ++I+DEAHN+ + +
Sbjct: 326 SLKACPYYGARAALSQADIVVTPYNTLLSKSTRDACGIKLAGNVVIVDEAHNLLETIGNI 385
Query: 303 GSVDIDEDVLLKLQMELE--------QVCSVNPMIYQPLIEMTQDLVGWIER-------R 347
SV++ L + L+ ++ + N + + LI + + +VG
Sbjct: 386 NSVELSHRQLTEAMHLLQCYQDRYKKRLSARNLVFIKQLIYLLKCIVGIFTNTNNKTSPE 445
Query: 348 KATLAKREFQHFFSCWTGD----KALRELQEANISRQCFPILLECATKAIKEATDTESEL 403
K T R S + K LR + +IS++ +E ++ +T +ES
Sbjct: 446 KETSVYRSNDFLLSLNVDNLNLFKILRYCKRTSISKK-LNGFMERYKSTVQVSTRSEST- 503
Query: 404 PHLSGMSVI-TLEGLFSSLTYFF------SRNGSHVSDYQLALQKYIKRDSKNPGGNWTH 456
H S+ + F ++ F +++G V ++Q A+Q
Sbjct: 504 EHGENDSIYDSYMAAFQNIENFLELLTNPNQDGRVVVNHQ-AMQS-------------QS 549
Query: 457 TLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFG------TCLEAPHVI 510
T+ LNPA F ++ ++I+ GT+ P+N L G T HVI
Sbjct: 550 TVKYLLLNPASYFAEIINDCRAVIIAGGTMQPVNDLRHRLFFACGVESSRITEFTCGHVI 609
Query: 511 DVDLQVLTSVISTGPDNYPLNASYKTADGYKLMEK----------------LC------- 547
D ++L +S GP L+ S+++ + ++++ +C
Sbjct: 610 APD-RILPFSLSKGPSGLELDFSFQSRELNTMIDEFGRILLNFVNVIPGGMVCFFASYDY 668
Query: 548 -----NRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRV 602
R +TG ++ KK ++ EP+ ++ E VL Y ++C + K++
Sbjct: 669 ETIVYTRLEKTGILEKIGRKKKVYREPRKSAK--VEQVLSDY-------ARCIQLSDKKL 719
Query: 603 KREGNNDLNTIESQENANKKGASFLAVCRGK----------------------------- 633
G+ LN GA +V GK
Sbjct: 720 ---GSTSLN-----------GAVLFSVVGGKMSEGINFSDGLGRLCILIIIINTTQLFLR 765
Query: 634 --IVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLS----GNEWYCNQAFRALNQAIGRCI 687
I+VG+P+PN ++ K +Y D+ S + S G +Y N +A+NQ+IGR I
Sbjct: 766 CVIMVGLPYPNSKSPELIEKMEYLDSLSSVSSPDSSKTLGQMYYENICLKAVNQSIGRAI 825
Query: 688 RHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASL 730
RH DY AI+LLD R++ R+ ++ W+ + + +YD F A+
Sbjct: 826 RHINDYAAIVLLDYRYKRSSIRSGLASWINERLIEYDRFGAAF 868
Score = 53.9 bits (128), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 36/53 (67%), Gaps = 5/53 (9%)
Query: 26 EFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
+FP+QPY Q+ FM R + T+ + ++ G + ESPTGTGKSLSL+C + W
Sbjct: 18 DFPFQPYDIQVQFM-RTLYTVLQDRKIG----IFESPTGTGKSLSLICGAITW 65
>gi|190407937|gb|EDV11202.1| deah box protein [Saccharomyces cerevisiae RM11-1a]
Length = 861
Score = 145 bits (367), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 159/673 (23%), Positives = 293/673 (43%), Gaps = 133/673 (19%)
Query: 146 IFYASRTHSQISQVISEYKKTAY-----------RVPMAVLASRKHYCTNKYV---RDKE 191
I+YASRT+SQ+ Q S+ + ++ +V LAS+K C N V + E
Sbjct: 233 IYYASRTYSQLGQFTSQLRLPSFPSSFRDKVPDEKVKYLPLASKKQLCINPKVMKWKTLE 292
Query: 192 NIDEECKLLLGDRNLGCPQFKNVHKVRGHP---SLQKGGCHEVHDIEDLVNVGQVVRGCS 248
I++ C L + GC ++N ++ R P +L+ E+ DIEDLV +G+ + C
Sbjct: 293 AINDACADLRHSKE-GCMFYQNTNEWRHCPDTLALRDMIFSEIQDIEDLVPLGKSLGICP 351
Query: 249 YYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDID 308
YYA+R A++V PY Y+++ R +++++++ +I+I+DEAHN+ + S I
Sbjct: 352 YYASREALPIAEVVTLPYQYLLSESTRSSLQINLENSIVIIDEAHNLIETINSIYSSQIS 411
Query: 309 -EDV----------LLKLQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKR-EF 356
ED+ K + L VN + L+ MT L+ +I + + + +
Sbjct: 412 LEDLKNCHKGIVTYFNKFKSRLNPGNRVNLLKLNSLL-MT--LIQFIVKNFKKIGQEIDP 468
Query: 357 QHFFSCWTGD-----KALRELQEANISRQCFPILLECATKAIKEATDTESELP-HLSGMS 410
F+ D K LR ++ + I+ + ++ +A+KE +++E P +
Sbjct: 469 NDMFTGSNIDTLNIHKLLRYIKVSKIAYK-----IDTYNQALKEEESSKNENPIKETHKK 523
Query: 411 VITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFK 470
++ + L ++ F + S+ Q +K +++ L P+ F+
Sbjct: 524 SVSSQPLLFKVSQFLYCLTNLTSEGQFFFEK-------------NYSIKYMLLEPSKPFE 570
Query: 471 DVAELSLSIILTSGTLSPMNSFSSELGVQFG----TCLEAPHVIDVD------------- 513
+ + ++L GT+ PM+ F S L + T L HVI +
Sbjct: 571 SILNQAKCVVLAGGTMEPMSEFLSNLLPEVPSEDITTLSCNHVIPKENLQTYITNQPELE 630
Query: 514 ----------------LQVLTSVISTGPDNYPLNASYKTADGYKLMEKLCNRWRETGQWS 557
Q + P + A + + Y+ + + W++ +++
Sbjct: 631 FTFEKRMSPSLVNNHLFQFFVDLSKAVPKKGGIVAFFPS---YQYLAHVIQCWKQNDRFA 687
Query: 558 RLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSK---CAVVRKKRVKREGNNDLNTIE 614
LN + +F E K G + +L Y +S+++G A+V K EG I
Sbjct: 688 TLNNVRKIFYEAKDGDE-----ILSGYSDSVAEGRGSLLLAIVGGKL--SEG------IN 734
Query: 615 SQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSG------- 667
Q++ +CR ++VG+PFPNI ++ +K+K + ++K + SG
Sbjct: 735 FQDD----------LCRAVVMVGLPFPNIFSGELIVKRK----HLAAKIMKSGGTEEEAS 780
Query: 668 ---NEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYD 724
E+ N +A+NQ++GR IRH DY I LLD R+ R +S+W++ SI
Sbjct: 781 RATKEFMENICMKAVNQSVGRAIRHANDYANIYLLDVRYNRPNFRKKLSRWVQDSINSEH 840
Query: 725 SFDASLEGLKSFF 737
+ + + FF
Sbjct: 841 TTHQVISSTRKFF 853
Score = 57.0 bits (136), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 46/79 (58%), Gaps = 7/79 (8%)
Query: 28 PYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCK---L 84
PY+PY Q+ M T+ R +G A+LESPTGTGK+LSL+C+T+ W + K
Sbjct: 13 PYKPYDIQVQLM----ETVYRVLSEGKKIAILESPTGTGKTLSLICATMTWLRMNKADIF 68
Query: 85 KNQLANISHSKPDTEAVTD 103
NI ++ D+E ++D
Sbjct: 69 TRMETNIKTNEDDSENLSD 87
>gi|207340439|gb|EDZ68787.1| YPL008Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256270082|gb|EEU05324.1| Chl1p [Saccharomyces cerevisiae JAY291]
gi|259150146|emb|CAY86949.1| Chl1p [Saccharomyces cerevisiae EC1118]
Length = 861
Score = 145 bits (365), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 159/673 (23%), Positives = 292/673 (43%), Gaps = 133/673 (19%)
Query: 146 IFYASRTHSQISQVISEYKKTAY-----------RVPMAVLASRKHYCTNKYV---RDKE 191
I+YASRT+SQ+ Q S+ + ++ +V LAS+K C N V + E
Sbjct: 233 IYYASRTYSQLGQFTSQLRLPSFPSSFRDKVPDEKVKYLPLASKKQLCINPKVMKWKTLE 292
Query: 192 NIDEECKLLLGDRNLGCPQFKNVHKVRGHP---SLQKGGCHEVHDIEDLVNVGQVVRGCS 248
I++ C L + GC ++N ++ R P +L+ E+ DIEDLV +G+ + C
Sbjct: 293 AINDACADLRHSKE-GCMFYQNTNEWRHCPDTLALRDMIFSEIQDIEDLVPLGKSLGICP 351
Query: 249 YYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDID 308
YYA+R A++V PY Y+++ R +++++++ +I+I+DEAHN+ + S I
Sbjct: 352 YYASREALPIAEVVTLPYQYLLSESTRSSLQINLENSIVIIDEAHNLIETINSIYSSQIS 411
Query: 309 -EDV----------LLKLQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKR-EF 356
ED+ K + L VN + L+ MT L+ +I + + + +
Sbjct: 412 LEDLKNCHKGIVTYFNKFKSRLNPGNRVNLLKLNSLL-MT--LIQFIVKNFKKIGQEIDP 468
Query: 357 QHFFSCWTGD-----KALRELQEANISRQCFPILLECATKAIKEATDTESELP-HLSGMS 410
F+ D K LR ++ + I+ + ++ +A+KE +++E P +
Sbjct: 469 NDMFTGSNIDTLNIHKLLRYIKVSKIAYK-----IDTYNQALKEEESSKNENPIKETHKK 523
Query: 411 VITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFK 470
++ + L ++ F + S+ Q +K +++ L P+ F+
Sbjct: 524 SVSSQPLLFKVSQFLYCLTNLTSEGQFFFEK-------------NYSIKYMLLEPSKPFE 570
Query: 471 DVAELSLSIILTSGTLSPMNSFSSELGVQFG----TCLEAPHVIDVD------------- 513
+ + ++L GT+ PM+ F S L + T L HVI +
Sbjct: 571 SILNQAKCVVLAGGTMEPMSEFLSNLLPEVPSEDITTLSCNHVIPKENLQTYITNQPELE 630
Query: 514 ----------------LQVLTSVISTGPDNYPLNASYKTADGYKLMEKLCNRWRETGQWS 557
Q + P + A + + Y+ + + W++ +++
Sbjct: 631 FTFEKRMSPSLVNNHLFQFFVDLSKAVPKKGGIVAFFPS---YQYLAHVIQCWKQNDRFA 687
Query: 558 RLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSK---CAVVRKKRVKREGNNDLNTIE 614
LN + +F E K G +L Y +S+++G A+V K EG I
Sbjct: 688 TLNNVRKIFYEAKDGDD-----ILSGYSDSVAEGRGSLLLAIVGGKL--SEG------IN 734
Query: 615 SQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSG------- 667
Q++ +CR ++VG+PFPNI ++ +K+K + ++K + SG
Sbjct: 735 FQDD----------LCRAVVMVGLPFPNIFSGELIVKRK----HLAAKIMKSGGTEEEAS 780
Query: 668 ---NEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYD 724
E+ N +A+NQ++GR IRH DY I LLD R+ R +S+W++ SI
Sbjct: 781 RATKEFMENICMKAVNQSVGRAIRHANDYANIYLLDVRYNRPNFRKKLSRWVQDSINSEH 840
Query: 725 SFDASLEGLKSFF 737
+ + + FF
Sbjct: 841 TTHQVISSTRKFF 853
Score = 57.0 bits (136), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 46/79 (58%), Gaps = 7/79 (8%)
Query: 28 PYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCK---L 84
PY+PY Q+ M T+ R +G A+LESPTGTGK+LSL+C+T+ W + K
Sbjct: 13 PYKPYDIQVQLM----ETVYRVLSEGKKIAILESPTGTGKTLSLICATMTWLRMNKADIF 68
Query: 85 KNQLANISHSKPDTEAVTD 103
NI ++ D+E ++D
Sbjct: 69 TRMETNIKTNEDDSENLSD 87
>gi|378731863|gb|EHY58322.1| chromosome transmission fidelity protein 1 [Exophiala dermatitidis
NIH/UT8656]
Length = 839
Score = 145 bits (365), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 169/716 (23%), Positives = 276/716 (38%), Gaps = 198/716 (27%)
Query: 146 IFYASRTHSQISQVISEYKK--------TAY-----------RVPMAVLASRKHYCTNKY 186
I Y SRTHSQ++Q ++E ++ +A+ RV L SRK+ C N
Sbjct: 195 IIYCSRTHSQLTQFVNELRRVKPPSSIPSAFDNLRPSTDLEERVKHLPLGSRKNLCINPK 254
Query: 187 V---RDKENIDEECKLLLGD---RNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNV 240
V I+E+C L ++ CP + + S + ++ DIEDL ++
Sbjct: 255 VARLSSTTAINEQCLELQKPGTAKDKKCPYLPSKEDRQRMESFRDKAIAQIRDIEDLAHL 314
Query: 241 GQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIAR 300
G+ + C YYA+RS A+++ PY ++ R A+ + +K ++I+DEAHN+ D
Sbjct: 315 GKRMDLCPYYASRSAITSAEVLTLPYPLLLQKSAREALGISVKDDVIIIDEAHNLADAIA 374
Query: 301 DAGSVDIDEDVLLKLQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFF 360
+ S + L +L + QV + + L G R T R F
Sbjct: 375 ETFSAALR---LSQLDQAVHQVTAYA-------VRFKNRLKG-KNRVYVTQVLRLLNSFT 423
Query: 361 SCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVITLEGLFSS 420
C LR + E + +K+ T T S+L G+ I L
Sbjct: 424 DC------LRSVGEKS---------------HMKDVTVTASQLMSGKGVDQIRPHKL--- 459
Query: 421 LTYFFSRNGSHVSDYQLALQKYIKRDSKNPGG--NWTHTLSLW----------------- 461
+ Y H + +QK ++ ++ G + + LSL
Sbjct: 460 MRYLHESKLCHKVESYTEVQKSVEGQNQGKGALMQFQNFLSLLMNPDDEGRFFVVRQDGD 519
Query: 462 ------CLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSEL----------GVQFGTCLE 505
L+P F+DV E + ++IL GT+SPM +++ L FG +
Sbjct: 520 ITVHYTLLDPREHFRDVVEDARAVILAGGTMSPMADYANYLFSYLDKDRLETFSFGHVVP 579
Query: 506 APHVIDVDLQVLTSVISTGPDNYPLNASYK---------------------TADG----- 539
+ H + + GP + +++ DG
Sbjct: 580 SSH-------LFAQPVVQGPSGSEFDFTFEKRRSEQMILELGHLVSRTCKIVPDGVVVFF 632
Query: 540 --YKLMEKLCNRWRETGQ----WSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSK 593
Y + ++ W++ L K F E KG S ++ +L+ Y N++ G
Sbjct: 633 PSYDYLAQVVAVWQKQPPALPLLQSLGKTKVTFQESKGVSVDE---LLRDYANAVDSG-- 687
Query: 594 CAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGI 638
KGA L+V GK I VG+
Sbjct: 688 ----------------------------KGALLLSVVGGKLSEGINFSDKLGRVVIAVGL 719
Query: 639 PFPNINDIQVSLKKKYNDTYR----SSKNLLSGNEW-----------YCNQAFRALNQAI 683
PFPN N + K ++ ++ R ++++L ++W Y N RA+NQ+I
Sbjct: 720 PFPNANGAEWKAKMQHVESLRYQQCRTESILPESQWQIEAKRASRDFYENACMRAINQSI 779
Query: 684 GRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSI-KQYDSFDASLEGLKSFFR 738
GR IRHR DY AII++D R+ +R R + KW++ SI S+D GL FFR
Sbjct: 780 GRVIRHRNDYAAIIMVDRRYATDRIRTKLPKWIQGSIGSDAKSWDEIERGLVEFFR 835
Score = 53.9 bits (128), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 31/51 (60%), Gaps = 5/51 (9%)
Query: 28 PYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
PYQPY QL FM ++ ++ G + ESPTGTGKSLSL+C L W
Sbjct: 11 PYQPYDIQLEFMTQLYRCIE-----GKKVGIFESPTGTGKSLSLICGALTW 56
>gi|340503511|gb|EGR30093.1| regulator of telomere elongation helicase 1, putative
[Ichthyophthirius multifiliis]
Length = 671
Score = 145 bits (365), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/307 (31%), Positives = 148/307 (48%), Gaps = 70/307 (22%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ GI + FPY+PY Q+++M +VI +L++ ++LL+SPTGTGK+L LLC+T+AW
Sbjct: 44 IDGIDIYFPYRPYPQQIMYMSKVIQSLNQGN-----NSLLQSPTGTGKTLCLLCATIAWL 98
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVK 139
+ + +NQ NI + +PP
Sbjct: 99 KKYREQNQ-ENIDN--------------------------VPPKK--------------- 116
Query: 140 KKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEECKL 199
I Y+SRTHSQI QV+ E K+T YR + VLASR YC K ++
Sbjct: 117 ------IVYSSRTHSQIQQVVKELKQTIYRPRITVLASRDQYCLKKEYQN---------- 160
Query: 200 LLGDRNL--GCPQFKNVHKVR----GHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAAR 253
L D L C + N H + H +L++ ++ DIE+L GQ C Y+ +R
Sbjct: 161 -LTDWTLISYCQKAINEHSCKFYQKNHENLEEIFSTDIMDIEELRQNGQKNGFCPYFHSR 219
Query: 254 SMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLL 313
+ D ++F PY+YI + +++ +ILI DEAHNI IA ++ S I L
Sbjct: 220 RVKDCVDIIFMPYNYIFDNQNASPFNIELTNSILIFDEAHNIAKIAEESTSFSITIKNLE 279
Query: 314 KLQMELE 320
++ E++
Sbjct: 280 AIETEIK 286
Score = 60.1 bits (144), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 84/214 (39%), Gaps = 63/214 (29%)
Query: 458 LSLWCLNPAVVFKDVA-ELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQV 516
+ + CL+P+V F + + SI+LTSGTL+P +S+ EL + F L HVID +
Sbjct: 460 IYMQCLDPSVSFSFIKIKNPHSILLTSGTLAPFDSWELELKIPFPIILNNQHVIDNKKNL 519
Query: 517 LTSVISTGPDNYPLNASYKTADGYKLME-------KLC---------------NRWRETG 554
L + GP L +Y+ +++ LC + W
Sbjct: 520 LAGICIKGPLEQELEFTYQNRQKNLILDDVGLTLLNLCKFIPNGILVIFNSSSSYWNCRK 579
Query: 555 QW--------SRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREG 606
QW ++L K LF EPK + + + + +Q +K
Sbjct: 580 QWENGEHKIMNKLKEHKQLFFEPKNSYE------MNSFMKNYTQAAK------------- 620
Query: 607 NNDLNTIESQENANKKGASFLAVCRGKIVVGIPF 640
+K+GA A+CRGK+ GI F
Sbjct: 621 -------------SKQGAILFAICRGKVSEGIDF 641
>gi|206558290|sp|A6ZWN8.1|CHL1_YEAS7 RecName: Full=ATP-dependent RNA helicase CHL1; AltName:
Full=Chromosome loss protein 1
gi|151942784|gb|EDN61130.1| DEAH box protein [Saccharomyces cerevisiae YJM789]
Length = 861
Score = 145 bits (365), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 159/673 (23%), Positives = 292/673 (43%), Gaps = 133/673 (19%)
Query: 146 IFYASRTHSQISQVISEYKKTAY-----------RVPMAVLASRKHYCTNKYV---RDKE 191
I+YASRT+SQ+ Q S+ + ++ +V LAS+K C N V + E
Sbjct: 233 IYYASRTYSQLGQFTSQLRLPSFPSSFRDKVPNEKVKYLPLASKKQLCINPKVMKWKTLE 292
Query: 192 NIDEECKLLLGDRNLGCPQFKNVHKVRGHP---SLQKGGCHEVHDIEDLVNVGQVVRGCS 248
I++ C L + GC ++N ++ R P +L+ E+ DIEDLV +G+ + C
Sbjct: 293 AINDACADLRHSKE-GCMFYQNTNEWRHCPDTLALRDMIFSEIQDIEDLVPLGKSLGICP 351
Query: 249 YYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDID 308
YYA+R A++V PY Y+++ R +++++++ +I+I+DEAHN+ + S I
Sbjct: 352 YYASREALPIAEVVTLPYQYLLSESTRSSLQINLENSIVIIDEAHNLIETINSIYSSQIS 411
Query: 309 -EDV----------LLKLQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKR-EF 356
ED+ K + L VN + L+ MT L+ +I + + + +
Sbjct: 412 LEDLKNCHKGIVTYFNKFKSRLNPGNRVNLLKLNSLL-MT--LIQFIVKNFKKIGQEIDP 468
Query: 357 QHFFSCWTGD-----KALRELQEANISRQCFPILLECATKAIKEATDTESELP-HLSGMS 410
F+ D K LR ++ + I+ + ++ +A+KE +++E P +
Sbjct: 469 NDMFTGSNIDTLNIHKLLRYIKVSKIAYK-----IDTYNQALKEEESSKNENPIKETHKK 523
Query: 411 VITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFK 470
++ + L ++ F + S+ Q +K +++ L P+ F+
Sbjct: 524 SVSSQPLLFKVSQFLYCLTNLTSEGQFFFEK-------------NYSIKYMLLEPSKPFE 570
Query: 471 DVAELSLSIILTSGTLSPMNSFSSELGVQFG----TCLEAPHVIDVD------------- 513
+ + ++L GT+ PM+ F S L + T L HVI +
Sbjct: 571 SILNQAKCVVLAGGTMEPMSEFLSNLLPEVPSKDITTLSCNHVIPKENLQTYITNQPELE 630
Query: 514 ----------------LQVLTSVISTGPDNYPLNASYKTADGYKLMEKLCNRWRETGQWS 557
Q + P + A + + Y+ + + W++ +++
Sbjct: 631 FTFEKRMSPSLVNNHLFQFFVDLSKAVPKKGGIVAFFPS---YQYLAHVIQCWKQNDRFA 687
Query: 558 RLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSK---CAVVRKKRVKREGNNDLNTIE 614
LN + +F E K G +L Y +S+++G A+V K EG I
Sbjct: 688 TLNNVRKIFYEAKDGDD-----ILSGYSDSVAEGRGSLLLAIVGGKL--SEG------IN 734
Query: 615 SQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSG------- 667
Q++ +CR ++VG+PFPNI ++ +K+K + ++K + SG
Sbjct: 735 FQDD----------LCRAVVMVGLPFPNIFSGELIVKRK----HLAAKIMKSGGTEEEAS 780
Query: 668 ---NEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYD 724
E+ N +A+NQ++GR IRH DY I LLD R+ R +S+W++ SI
Sbjct: 781 RATKEFMENICMKAVNQSVGRAIRHANDYANIYLLDVRYNRPNFRKKLSRWVQDSINSEH 840
Query: 725 SFDASLEGLKSFF 737
+ + + FF
Sbjct: 841 TTHQVISSTRKFF 853
Score = 57.0 bits (136), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 46/79 (58%), Gaps = 7/79 (8%)
Query: 28 PYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCK---L 84
PY+PY Q+ M T+ R +G A+LESPTGTGK+LSL+C+T+ W + K
Sbjct: 13 PYKPYDIQVQLM----ETVYRVLSEGKKIAILESPTGTGKTLSLICATMTWLRMNKADIF 68
Query: 85 KNQLANISHSKPDTEAVTD 103
NI ++ D+E ++D
Sbjct: 69 TRMETNIKTNEDDSENLSD 87
>gi|6325249|ref|NP_015317.1| Chl1p [Saccharomyces cerevisiae S288c]
gi|116351|sp|P22516.1|CHL1_YEAST RecName: Full=ATP-dependent RNA helicase CHL1; AltName:
Full=Chromosome loss protein 1; AltName: Full=Chromosome
transmission fidelity protein 1
gi|3538|emb|CAA39922.1| CHL1 [Saccharomyces cerevisiae]
gi|683782|emb|CAA88378.1| Chl1p [Saccharomyces cerevisiae]
gi|965085|gb|AAB68097.1| Chl1p: kinetochore protein in the DEAH box family [Saccharomyces
cerevisiae]
gi|1314068|emb|CAA95033.1| Chl1p [Saccharomyces cerevisiae]
gi|285815528|tpg|DAA11420.1| TPA: Chl1p [Saccharomyces cerevisiae S288c]
gi|392296003|gb|EIW07106.1| Chl1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 861
Score = 145 bits (365), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 159/673 (23%), Positives = 292/673 (43%), Gaps = 133/673 (19%)
Query: 146 IFYASRTHSQISQVISEYKKTAY-----------RVPMAVLASRKHYCTNKYV---RDKE 191
I+YASRT+SQ+ Q S+ + ++ +V LAS+K C N V + E
Sbjct: 233 IYYASRTYSQLGQFTSQLRLPSFPSSFRDKVPDEKVKYLPLASKKQLCINPKVMKWKTLE 292
Query: 192 NIDEECKLLLGDRNLGCPQFKNVHKVRGHP---SLQKGGCHEVHDIEDLVNVGQVVRGCS 248
I++ C L + GC ++N ++ R P +L+ E+ DIEDLV +G+ + C
Sbjct: 293 AINDACADLRHSKE-GCIFYQNTNEWRHCPDTLALRDMIFSEIQDIEDLVPLGKSLGICP 351
Query: 249 YYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDID 308
YYA+R A++V PY Y+++ R +++++++ +I+I+DEAHN+ + S I
Sbjct: 352 YYASREALPIAEVVTLPYQYLLSESTRSSLQINLENSIVIIDEAHNLIETINSIYSSQIS 411
Query: 309 -EDV----------LLKLQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKR-EF 356
ED+ K + L VN + L+ MT L+ +I + + + +
Sbjct: 412 LEDLKNCHKGIVTYFNKFKSRLNPGNRVNLLKLNSLL-MT--LIQFIVKNFKKIGQEIDP 468
Query: 357 QHFFSCWTGD-----KALRELQEANISRQCFPILLECATKAIKEATDTESELP-HLSGMS 410
F+ D K LR ++ + I+ + ++ +A+KE +++E P +
Sbjct: 469 NDMFTGSNIDTLNIHKLLRYIKVSKIAYK-----IDTYNQALKEEESSKNENPIKETHKK 523
Query: 411 VITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFK 470
++ + L ++ F + S+ Q +K +++ L P+ F+
Sbjct: 524 SVSSQPLLFKVSQFLYCLTNLTSEGQFFFEK-------------NYSIKYMLLEPSKPFE 570
Query: 471 DVAELSLSIILTSGTLSPMNSFSSELGVQFG----TCLEAPHVIDVD------------- 513
+ + ++L GT+ PM+ F S L + T L HVI +
Sbjct: 571 SILNQAKCVVLAGGTMEPMSEFLSNLLPEVPSEDITTLSCNHVIPKENLQTYITNQPELE 630
Query: 514 ----------------LQVLTSVISTGPDNYPLNASYKTADGYKLMEKLCNRWRETGQWS 557
Q + P + A + + Y+ + + W++ +++
Sbjct: 631 FTFEKRMSPSLVNNHLFQFFVDLSKAVPKKGGIVAFFPS---YQYLAHVIQCWKQNDRFA 687
Query: 558 RLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSK---CAVVRKKRVKREGNNDLNTIE 614
LN + +F E K G +L Y +S+++G A+V K EG I
Sbjct: 688 TLNNVRKIFYEAKDGDD-----ILSGYSDSVAEGRGSLLLAIVGGKL--SEG------IN 734
Query: 615 SQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSG------- 667
Q++ +CR ++VG+PFPNI ++ +K+K + ++K + SG
Sbjct: 735 FQDD----------LCRAVVMVGLPFPNIFSGELIVKRK----HLAAKIMKSGGTEEEAS 780
Query: 668 ---NEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYD 724
E+ N +A+NQ++GR IRH DY I LLD R+ R +S+W++ SI
Sbjct: 781 RATKEFMENICMKAVNQSVGRAIRHANDYANIYLLDVRYNRPNFRKKLSRWVQDSINSEH 840
Query: 725 SFDASLEGLKSFF 737
+ + + FF
Sbjct: 841 TTHQVISSTRKFF 853
Score = 57.0 bits (136), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 46/79 (58%), Gaps = 7/79 (8%)
Query: 28 PYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCK---L 84
PY+PY Q+ M T+ R +G A+LESPTGTGK+LSL+C+T+ W + K
Sbjct: 13 PYKPYDIQVQLM----ETVYRVLSEGKKIAILESPTGTGKTLSLICATMTWLRMNKADIF 68
Query: 85 KNQLANISHSKPDTEAVTD 103
NI ++ D+E ++D
Sbjct: 69 TRMETNIKTNEDDSENLSD 87
>gi|440633923|gb|ELR03842.1| hypothetical protein GMDG_01371 [Geomyces destructans 20631-21]
Length = 874
Score = 144 bits (364), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 163/694 (23%), Positives = 277/694 (39%), Gaps = 171/694 (24%)
Query: 146 IFYASRTHSQISQVISEYKKTAYRVPMAV-------------------LASRKHYCTNKY 186
IFY SRTHSQ++Q I+E ++ ++P A+ L SRK+ C N
Sbjct: 222 IFYCSRTHSQLTQFINELRRV--KIPPALQPEPAPVKPLLGEEFKHLTLGSRKNLCINPS 279
Query: 187 V---RDKENIDEECKLL------LGDRNLGCPQFKN---VHKVRGHPSLQKGGCHEVHDI 234
V R I+E C L + P +N V+ R H + DI
Sbjct: 280 VNKLRSATAINERCMELQQSGTATDKKCCFLPNQQNQPLVNDFRDH------ALATIRDI 333
Query: 235 EDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHN 294
E+L ++G+ ++ C YYA+RS A++V PY ++ R A+ V +KG ++I+DEAHN
Sbjct: 334 EELGDLGKEMKICPYYASRSAIKPAEIVTLPYPLLLQKSAREALGVSVKGHVVIVDEAHN 393
Query: 295 IEDIARDAGSVDIDEDVLLKLQMELEQVC--------SVNPMIYQPLIEMTQDLVGWIER 346
+ D + + L + + ++ Q N + ++ + L +++
Sbjct: 394 LMDAIAGIYGITVSLSQLKRSRAQIGQYLQRFRNKLKGKNRVYVAQVVRLIDSLAQFLDG 453
Query: 347 R---KATLAKREFQHFFSCWTGD----KALRELQEANISRQC--FPILLEC--------A 389
+ K + + K +R LQ++ ++R+ + I E A
Sbjct: 454 KVGQKGEMVVEPSELLVGKGVDQINLYKLMRYLQDSKLARKVEGYIIFAEGAAADNGNPA 513
Query: 390 TKAIKEATDTESELPHLSGMSVITLEGLFSSLT-------YFFSRNGSHVSDYQLALQKY 442
KA K +E+ P L ++ L +LT F++++ SD L KY
Sbjct: 514 AKARKPDATSEAATPTLQ-----HIQSLLVALTNPSKEGRLFYAKD-PETSDIVL---KY 564
Query: 443 IKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSE----LGV 498
+ L+P F+++ + ++IL GT+SPM ++S L
Sbjct: 565 M------------------LLDPTHHFQEIVSEARAVILAGGTMSPMADYTSHLLSYLPA 606
Query: 499 QFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTADG------------------- 539
+ T L HVI + +L +S GP P ++ G
Sbjct: 607 ERITTLSCGHVIPKE-NLLAWTLSKGPTGKPFEFTFSKRAGREGEEMIDELGRAVLNICT 665
Query: 540 ------------YKLMEKLCNRWR---ETGQ---WSRLNAKKPLFVEPKGGSQEDFEIVL 581
Y ++ + RW E G+ W RL +K LF E K ++ E VL
Sbjct: 666 IVPDGIVVFFPSYSYLDTVIKRWEVILEPGRPSIWERLGKRKALFREAK-DAKVGAEYVL 724
Query: 582 KHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFP 641
Y +I +G L+ + + + + L C ++VG+P+P
Sbjct: 725 TEYAKAID-------------GNQGGLLLSVVGGKMSEGINFSDRLGRC--VVIVGLPYP 769
Query: 642 NINDIQVSLKKKYNDTY---------------RSSKNLLSGNEWYCNQAFRALNQAIGRC 686
NI + K Y +T R + E+Y N RA+NQ++GR
Sbjct: 770 NIMSGEWKAKMSYIETATIERLEAAGEGTTSSRQAAGKAEAREFYENACMRAVNQSVGRA 829
Query: 687 IRHRFDYGAIILLDERFQEERNRAHISKWLRKSI 720
IRH+ D+ +II++D RF +E R + W+R +
Sbjct: 830 IRHKNDFASIIIVDGRFGKEGIRRKLPGWIRDGL 863
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 38/63 (60%), Gaps = 5/63 (7%)
Query: 23 IQVEF--PYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQ 80
+ V+F PY PY Q FM V S L+R +LESPTGTGKSLSL+C++L W +
Sbjct: 21 LAVDFHHPYTPYSIQEDFMQTVYSVLERGD---SSVGILESPTGTGKSLSLICASLTWLR 77
Query: 81 NCK 83
K
Sbjct: 78 EYK 80
>gi|380087536|emb|CCC05322.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 989
Score = 144 bits (364), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 160/681 (23%), Positives = 276/681 (40%), Gaps = 129/681 (18%)
Query: 146 IFYASRTHSQISQVISEYKKTAYRVPMAV------------------LASRKHYCTNKYV 187
IFY SRTHSQ++Q I E ++ + P +V L+SR+ C N V
Sbjct: 294 IFYTSRTHSQLTQFIQELRRPEF--PASVPTLDAHEEPAKEIVKQIPLSSRQKLCINPSV 351
Query: 188 RDKEN---IDEECKLLLGDRNLG---CPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVG 241
I+E C+ L + CP N ++ + + DIEDL G
Sbjct: 352 NKLGTLAAINERCQSLQQPKTPKEHRCPYLPNAANLKATHEFRDTALATLPDIEDLYQTG 411
Query: 242 QVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARD 301
+ ++ C YYA+R+ A+++ PY ++ R A+ + ++G I+I+DEAHNI D +
Sbjct: 412 KQLKICPYYASRAAIPGAEVITLPYPLLLQKSAREALGIKLEGNIVIIDEAHNIMDAVSN 471
Query: 302 AGSVDIDEDVLLKLQMEL--------EQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAK 353
+ +I L + ++ L +++ N ++ L + + L +I+ R AK
Sbjct: 472 VHAAEIKYTDLKRAKLSLGMYYQRFYQKLKGENRVMVAQLQRVVEALGVYIKSRLGRAAK 531
Query: 354 --REFQH--------FFSCWTGD-----KALRELQEANISRQCFPILLECATKAI-KEAT 397
+E Q + D K +R +QE+ ++ + C ++ +
Sbjct: 532 GLKENQEGVVYDTNLLLATGGADQINLYKLIRYVQESKLAFKLEGYASYCEEESRDTDDE 591
Query: 398 DTESELPHLSGMSVI--TLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWT 455
+TE E+ G + TL ++LT S + + ++ G
Sbjct: 592 ETEKEIKKREGRPPVLHTLCSFLTALTNLSSEG-----------RLFYEKIPPPKGEIQD 640
Query: 456 HTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFG----TCLEAPHVID 511
LS L+P F +AE + ++IL GT+SP + + L T L HVI
Sbjct: 641 MKLSYMLLSPTHAFSSIAESARAVILAGGTMSPFEDYKAHLFPDVPPEKITTLSCGHVIP 700
Query: 512 VDLQVLTSVISTGPDNYPLNASYKTADGYKLMEK----LCNRWRETGQWSRLNAKKPLFV 567
+ + ++ S PD + + ++ + NR W RL +KK +F+
Sbjct: 701 KENLCVWTLGSIAPDPKIDTGIGEDCFDFTFTKRNNPNMINRL-GLPIWERLESKKAVFM 759
Query: 568 EPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFL 627
+ K S E L+ Y + I + RVK G L+ + + + + L
Sbjct: 760 DSKTESSEQ---TLQKYSDVIHSEVRPISPSGTRVK--GALLLSVVGGKMSEGINFSDRL 814
Query: 628 AVCRGKIVVGIPFPNINDIQVSLKKKY--------------------------------- 654
C +V+G+P+PN + + +++Y
Sbjct: 815 GRC--VVVIGLPYPNAHSPEWVARREYLEDNFIERYNASHPITTTTPAPAPVIPPPSNTR 872
Query: 655 ------------NDTYRSSKNLL-----SGNEWYCNQAFRALNQAIGRCIRHRFDYGAII 697
D + + NL S N +Y N RA+NQ+IGR IRH+ DY AII
Sbjct: 873 HVHSSSSSKSKKRDRHNNPPNLAKLAARSVNVFYENATMRAVNQSIGRAIRHQNDYAAII 932
Query: 698 LLDERFQEERNRAHISKWLRK 718
L+D R++ E RA + W+R+
Sbjct: 933 LIDHRYEREHVRAKLPGWIRE 953
Score = 40.0 bits (92), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 25/43 (58%)
Query: 62 PTGTGKSLSLLCSTLAWQQNCKLKNQLANISHSKPDTEAVTDP 104
PTGTGKSLSL+C++L W +N K I K EA +P
Sbjct: 134 PTGTGKSLSLICASLTWLRNHKRLQFETEIDKIKKQMEASGEP 176
>gi|349581808|dbj|GAA26965.1| K7_Chl1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 861
Score = 144 bits (362), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 157/673 (23%), Positives = 290/673 (43%), Gaps = 133/673 (19%)
Query: 146 IFYASRTHSQISQVISEYKKTAY-----------RVPMAVLASRKHYCTNKYV---RDKE 191
I+YASRT+SQ+ Q S+ + ++ +V LAS+K C N V + E
Sbjct: 233 IYYASRTYSQLGQFTSQLRLPSFPSSFRDKVPNEKVKYLPLASKKQLCINPKVMKWKTLE 292
Query: 192 NIDEECKLLLGDRNLGCPQFKNVHKVRGHP---SLQKGGCHEVHDIEDLVNVGQVVRGCS 248
I++ C L + GC ++N ++ R P +L+ E+ DIEDLV +G+ + C
Sbjct: 293 AINDACADLRHSKE-GCMFYQNTNEWRHCPDTLALRDMIFSEIQDIEDLVPLGKSLGICP 351
Query: 249 YYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDID 308
YYA+R A++V PY Y+++ R +++++++ +I+I+DEAHN+ + S I
Sbjct: 352 YYASREALPIAEVVTLPYQYLLSESTRSSLQINLENSIVIIDEAHNLIETINSIYSSQIS 411
Query: 309 -EDV----------LLKLQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKR-EF 356
ED+ K + L VN + L+ L+ +I + + + +
Sbjct: 412 LEDLKNCHKGIVTYFNKFKSRLNPGNRVNLLKLNSLL---MALIQFIVKNFKKIGQEIDP 468
Query: 357 QHFFSCWTGD-----KALRELQEANISRQCFPILLECATKAIKEATDTESELP-HLSGMS 410
F+ D K LR ++ + I+ + ++ +A+KE +++E P +
Sbjct: 469 NDMFTGSNIDTLNIHKLLRYIKVSKIAYK-----IDTYNQALKEEESSKNENPIKETHKK 523
Query: 411 VITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFK 470
++ + L ++ F + S+ Q +K +++ L P+ F+
Sbjct: 524 SVSSQPLLFKVSQFLYCLTNLTSEGQFFFEK-------------NYSIKYMLLEPSKPFE 570
Query: 471 DVAELSLSIILTSGTLSPMNSFSSELGVQFG----TCLEAPHVIDVD------------- 513
+ + ++L GT+ PM+ F S L + T L HVI +
Sbjct: 571 SILNQAKCVVLAGGTMEPMSEFLSNLLPEVPSKDITTLSCNHVIPKENLQTYITNQPELE 630
Query: 514 ----------------LQVLTSVISTGPDNYPLNASYKTADGYKLMEKLCNRWRETGQWS 557
Q + P + A + + Y+ + + W++ +++
Sbjct: 631 FTFEKRMSPSLVNNHLFQFFVDLSKAVPKKGGIVAFFPS---YQYLAHVIQCWKQNDRFA 687
Query: 558 RLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSK---CAVVRKKRVKREGNNDLNTIE 614
LN + +F E K G +L Y +S+++G A+V K EG I
Sbjct: 688 TLNNVRKIFYEAKDGDD-----ILSGYSDSVAEGRGSLLLAIVGGKL--SEG------IN 734
Query: 615 SQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSG------- 667
Q++ +CR ++VG+PFPNI ++ +K+K + ++K + SG
Sbjct: 735 FQDD----------LCRAVVMVGLPFPNIFSGELIVKRK----HLAAKIMKSGGTEEEAS 780
Query: 668 ---NEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYD 724
E+ N +A+NQ++GR IRH DY I LLD R+ R +S+W++ SI
Sbjct: 781 RATKEFMENICMKAVNQSVGRAIRHANDYANIYLLDVRYNRPNFRKKLSRWVQDSINSEH 840
Query: 725 SFDASLEGLKSFF 737
+ + + FF
Sbjct: 841 TTHQVISSTRKFF 853
Score = 57.0 bits (136), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 46/79 (58%), Gaps = 7/79 (8%)
Query: 28 PYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCK---L 84
PY+PY Q+ M T+ R +G A+LESPTGTGK+LSL+C+T+ W + K
Sbjct: 13 PYKPYDIQVQLM----ETVYRVLSEGKKIAILESPTGTGKTLSLICATMTWLRMNKADIF 68
Query: 85 KNQLANISHSKPDTEAVTD 103
NI ++ D+E ++D
Sbjct: 69 TRMETNIKTNEDDSENLSD 87
>gi|294892654|ref|XP_002774167.1| regulator of telomere elongation helicase 1 rtel1, putative
[Perkinsus marinus ATCC 50983]
gi|239879384|gb|EER05983.1| regulator of telomere elongation helicase 1 rtel1, putative
[Perkinsus marinus ATCC 50983]
Length = 1036
Score = 144 bits (362), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 99/300 (33%), Positives = 144/300 (48%), Gaps = 54/300 (18%)
Query: 477 LSIILTSGTLSPMNSFSSEL-GVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYK 535
LS+I+TSGTL+P+ F L GV F LE H+I D QV +I GP N LN S++
Sbjct: 561 LSLIVTSGTLAPLTEFKRGLRGVDFPIMLENDHIITFD-QVWGGIICAGPTNVKLNGSFR 619
Query: 536 TADGYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEI-------VLKHYYNSI 588
T + + +++L N V PK G K +++S
Sbjct: 620 TRNSHDYLQELGNVLAN--------------VAPKAGDGVLVAFSSYAQLRTAKDFWDSH 665
Query: 589 SQGSKCAVVRKKRVKREGNNDLNTI-------ESQENANKKGASFLAVCRGKI------- 634
++ R R+ E N+ +N I + + + GA AVCRGK+
Sbjct: 666 DITNRFQQ-RGLRIFEEPNDAVNYIPVLAEYTAAIASNSCNGAILCAVCRGKVCEGVDLT 724
Query: 635 --------VVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSG------NEWYCNQAFRALN 680
VVGIP+P D +V LK +Y DT R +++ G WY +A RA+N
Sbjct: 725 DRQCRIVMVVGIPYPMFKDERVQLKMQYLDTARDIEDIQKGAHAPLGRAWYSLEAMRAVN 784
Query: 681 QAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFRDV 740
QA+GR IRH+ D+GA++L DERFQ E +R + WLR +K Y +F ++ L FF +
Sbjct: 785 QAVGRIIRHKNDFGAVLLCDERFQSEAHR--LPAWLRPYVKTYQAFGPAIGSLTQFFNQI 842
Score = 101 bits (252), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 156/316 (49%), Gaps = 46/316 (14%)
Query: 56 HALLESPTGTGKSLSLLCSTLAWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIP-E 114
+ALLESPTGTGK+L LLC+TLAW+++ ++++ S S P T A + P+ + +P E
Sbjct: 158 NALLESPTGTGKTLCLLCATLAWRRSLT-EDKMP--SSSSP-TNATSLPIED----VPLE 209
Query: 115 SQP--------STIPPSTNGQTAQVAMNNKNVKKK----------MTPTIFYASRTHSQI 156
+QP I P + V + + ++ P I Y+SRTHSQ+
Sbjct: 210 TQPEIAHAVEFGIIGPRWRSKQLIVEEHQRQSRRSPSPPSRKSPVAVPKIVYSSRTHSQL 269
Query: 157 SQVISEYKKTAYR--VPMAVLASRKHYCTNKYVRDKENIDEECK---LLLGDRNLGCPQF 211
QV+ E + T+Y LASR+HYC N + + + L+L + CP +
Sbjct: 270 RQVMRELRGTSYAKDCQHITLASREHYCVNTRISAIQGSRKTAACTSLILKN---ACPYY 326
Query: 212 KNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFC---PYSY 268
+ ++ PS+ D+E+L + + C +Y AR +A + + C PY+Y
Sbjct: 327 NRMWQMNETPSMIP---PPALDVEELTSHARGKGYCPFYYARKVAREGSNLGCMLVPYNY 383
Query: 269 IIN-PVIRGAMEVD-IKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQV---C 323
+ + ++GA+ ++GAI+I+DE HNIE + ++ S + + E+++ C
Sbjct: 384 LFDLSALKGALGPQALEGAIVIVDEGHNIEAVCEESASFEWGNFDIFAAVEEVDEAAYRC 443
Query: 324 SVNPMIYQPLIEMTQD 339
+ +P I +E D
Sbjct: 444 NNSPKILGLNVEHAPD 459
>gi|260946235|ref|XP_002617415.1| hypothetical protein CLUG_02859 [Clavispora lusitaniae ATCC 42720]
gi|238849269|gb|EEQ38733.1| hypothetical protein CLUG_02859 [Clavispora lusitaniae ATCC 42720]
Length = 825
Score = 143 bits (361), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 167/676 (24%), Positives = 281/676 (41%), Gaps = 142/676 (21%)
Query: 145 TIFYASRTHSQISQV---------------ISEYKKTAYRVPMAVLASRKHYCTNKYVRD 189
TI ++SRTHSQ+ Q I+EY K L SRK C N VR
Sbjct: 200 TILFSSRTHSQLYQFAHQLQLPSFHSSLEEITEYTK------FVALGSRKQLCINDKVRS 253
Query: 190 KEN---IDEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHE------------VHDI 234
N I++ C + L ++ C F P + K G E V+DI
Sbjct: 254 LGNLNSINDAC-VDLQKKDQPCDFF---------PKITKSGVSEKTKSFIDNCFVKVNDI 303
Query: 235 EDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHN 294
ED+ ++G+ + C YY R+ D A+++ PY +++ R ++++ I+ +I+++DEAHN
Sbjct: 304 EDVASLGKKLEICPYYTVRNATDYAEIIALPYQLLLSKSARESLDLKIENSIVVIDEAHN 363
Query: 295 IEDIARDAGSVDIDEDVL------LKLQME--LEQVCSVNPMIYQPLIEMTQDLVGWIER 346
+ D SV + L LKL + ++ S N + LI++ Q + ++ +
Sbjct: 364 LIDTISSMNSVRLSLSELTMCINGLKLYLSKFARRLNSGNRIYLVKLIKLCQVVQKFMTK 423
Query: 347 RKATLA--KREFQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELP 404
+ + K + F TGD +S+ +E + + + +S
Sbjct: 424 TLSYKSGDKVDPLEIFQGNTGDLINVNKLNKYLSKSKIAYKIESYLEHVDDQISKQSSSN 483
Query: 405 HLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLN 464
+ V LE L ++ S G + D Q TL L+
Sbjct: 484 PILFKVVQFLECLTNT-----SNEGEIIWDMQ----------------EENVTLQYILLD 522
Query: 465 PAVVFKDVAELSLSIILTSGTLSPMNSFSSELG-------VQFGTCLEAPHVIDVDLQVL 517
P+++F+DV + ++L GT+ PM+ F S L V+ TC H+I + +
Sbjct: 523 PSIIFEDVLSQAKCVLLCGGTMEPMDDFKSYLFPNIPSNLVKTFTC---DHLIPKENLKV 579
Query: 518 TSVISTGPDNYPLNASYKTADG--------------------------YKLMEKLCNRWR 551
+V +T ++ + ++ YK + + + W
Sbjct: 580 FAVKATNNLDFEFSFQKRSQPSMMRELGLLIARLCQSIPSGVVIFFPSYKYLSHVFSLWS 639
Query: 552 ETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLN 611
+G R+++ K +F EPK SQE E L+ Y N++ K A L
Sbjct: 640 SSGILERISSSKTVFQEPKD-SQE-VESTLQEYSNAVKSSFKGAA-------------LF 684
Query: 612 TIESQENANKKGASFLA-VCRGKIVVGIPFPNINDIQVSLKKKYNDTYRS--------SK 662
+ + A +G +F + RG IVVG+P+PN L K N R+ S+
Sbjct: 685 AVVGGKMA--EGINFADDLARGVIVVGLPYPNA--AATDLVAKQNHIVRTLIAKGKSRSE 740
Query: 663 NLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQ 722
+ ++Y N RA+NQ+IGR IRH DY I L+D+R+ + R +SKW+R +
Sbjct: 741 AANASRDFYENICMRAVNQSIGRSIRHANDYSTIFLIDQRYSRKNIRQKLSKWVRNQLSD 800
Query: 723 YD-SFDASLEGLKSFF 737
D + D + + FF
Sbjct: 801 SDQNIDEIIHSTEKFF 816
Score = 53.5 bits (127), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 41/66 (62%), Gaps = 5/66 (7%)
Query: 28 PYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCKLKNQ 87
PY+PY Q M + T++ + G L ESPTGTGK+LS++CST+ W ++ K +N
Sbjct: 19 PYEPYKIQNELMDAIYETVNNGFKVG----LFESPTGTGKTLSIICSTMTWLRDFKQEND 74
Query: 88 LANISH 93
NI++
Sbjct: 75 -TNIAY 79
>gi|340052773|emb|CCC47058.1| putative helicase [Trypanosoma vivax Y486]
Length = 968
Score = 143 bits (361), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 113/391 (28%), Positives = 176/391 (45%), Gaps = 66/391 (16%)
Query: 390 TKAIKEATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKN 449
TKAI + +E M+ L + L + F R G ++ A + + ++
Sbjct: 376 TKAITLLSQSE--------MAATGLTKVQQLLAFVFERCGE---EFDEACRFVLALSPQS 424
Query: 450 PGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHV 509
G L WCL+ + + + + S+ILTSGTLSP++ F++E+G+ F CL HV
Sbjct: 425 SGAPKQRVLGYWCLDISPSLQTLVKSVHSLILTSGTLSPLDHFAAEIGIHFEVCLSGGHV 484
Query: 510 IDVDLQVLTSVISTGPDNYPLNASY--KTADGYK--LMEKLCNRWRETG--------QWS 557
I QV ++ GP LN SY +++ Y+ L L N R T +
Sbjct: 485 IAPS-QVAGCILCKGPSGERLNGSYAFRSSLDYRIGLGMALVNISRNTPGGVLVFFPSYV 543
Query: 558 RLNAKKPLFVEPKGGSQEDFEI--VLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIES 615
LNA L+ G + E I +L+H V+ V+ D +TI +
Sbjct: 544 ALNAAVDLWRAGSGRTNETETIWAMLEH-------------VKPVFVEPTDVRDTSTIVT 590
Query: 616 Q-----ENANKKGASFLAVCRGKI---------------VVGIPFPNINDIQVSLKKKYN 655
+ A +GA LAVCRGK+ V GIPF N D+ V LK++Y
Sbjct: 591 SFQREVDAAPSRGAILLAVCRGKVSEGINFADNHGRCVLVAGIPFANYTDLFVRLKREYV 650
Query: 656 DTYRSSK-----NLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRA 710
+ + + +G++WY N+A R +NQ +GR IRH+ DYG ++L DERF ++ +
Sbjct: 651 SSVAAQRPKVRGRTFTGDDWYINEAMRCVNQCVGRVIRHKDDYGVVVLADERFSDKID-- 708
Query: 711 HISKWLRKSIKQYDSFDASLEGLKSFFRDVK 741
+S WL + F + + FF K
Sbjct: 709 ALSGWLASRCTVHREFRGTYAAVAQFFATFK 739
Score = 140 bits (352), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 94/291 (32%), Positives = 136/291 (46%), Gaps = 73/291 (25%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ G+++ FP+ PY +Q+ +M V+ LD A +ALLESPTGTGK+L LLC+ LAW
Sbjct: 6 IRGVEISFPFDPYPAQVEYMQAVMDALDNAA-----NALLESPTGTGKTLCLLCAVLAWL 60
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVK 139
+ K Q + S + VT
Sbjct: 61 E----KRQSISFSGGATGSPGVT------------------------------------- 79
Query: 140 KKMTPTIFYASRTHSQISQVISEYKKTAYR--VPMAVLASRKHYCTNKYVRDKENIDEE- 196
+ Y SRTH+Q+S VI E KKT+Y MA++ SR+H C + V +++ +
Sbjct: 80 -----RVVYCSRTHTQLSHVIRELKKTSYSSAFSMAIMGSREHMCVHSQVLRLQSVHAQQ 134
Query: 197 --CKLLLGDRNLGCPQFKNVHKVRGHPS-------LQKGGCHEVHDIEDLVNVGQVVRGC 247
C L D KN H RG S L K C VHD+EDL G C
Sbjct: 135 AMCNSLRED--------KNCHFYRGFQSRLARNEMLSKESC--VHDMEDLFAEGYKCGFC 184
Query: 248 SYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDI 298
YY R +A ++ ++F PY+YI + +R + D+K +LI+DEAHN+ +
Sbjct: 185 PYYWERELAKESSIIFLPYNYIFDSTLRRQLPFDLKDCVLIVDEAHNLPSV 235
>gi|206558115|sp|A2QY22.1|CHL1_ASPNC RecName: Full=ATP-dependent RNA helicase chl1; AltName:
Full=Chromosome loss protein 1
gi|134079766|emb|CAK40902.1| unnamed protein product [Aspergillus niger]
Length = 874
Score = 143 bits (361), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 184/761 (24%), Positives = 298/761 (39%), Gaps = 186/761 (24%)
Query: 79 QQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNV 138
+++ K +++LA+ S P T + + + Q ST P ++ +N V
Sbjct: 156 EEHSKPRDELAHTSELSPSTLELLERF--------KGQISTAKPGSDD------ADNDEV 201
Query: 139 KKKMTPTIFYASRTHSQISQVISEYKKTAY---------------------RVPMAVLAS 177
K IFY SRTHSQ++Q E ++ RV L S
Sbjct: 202 K------IFYCSRTHSQLTQFAGELRRVKMPWSIPKDLLSTDLTGEEELEERVKHVTLGS 255
Query: 178 RKHYCTNKYVRDKEN---IDEECKLLLGDRNLG----CPQFKNVHKVRGHPSLQKGGCHE 230
RK+ C N V EN I+E C L L N+ CP + R +
Sbjct: 256 RKNLCINPRVSSLENATAINERC-LDLQQPNVNPQHRCPFLPSKEDERQVLQFRDHALST 314
Query: 231 VHDIEDLVNVGQVVRGCSYYAARSMADDA------------------QLVFCPYSYIINP 272
V DIEDL +G+ + C YYA+RS+ D+ Q+V PY ++
Sbjct: 315 VKDIEDLGKLGKKIGICPYYASRSVVKDSEVCCLRARSSIDLVPDEWQIVTLPYPLLLQR 374
Query: 273 VIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQVC--------- 323
R A+ +KG ++I+DEAHN+ D + SV + L +LQ L Q+
Sbjct: 375 SAREALNSSVKGHVIIIDEAHNLMDAISNIHSVTV---TLSQLQTSLSQLTIYGRKFKTR 431
Query: 324 ------SVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGD-----KALREL 372
S + + L + L +E KA S D K R L
Sbjct: 432 LKGKNRSYVAQVIRLLSSIAAHLRSLLESGKAPEGPVLISELMSGKGVDQINPYKLSRYL 491
Query: 373 QEANISRQCFPILLECATKAIKEATD--TESELPHLSGMSVITLEGLFSSLTYFFSRNGS 430
QE+ ++R+ + + K+A+ T L H+ G +++L + F+S+
Sbjct: 492 QESKLARKVDGYVEFTRDPSDKQASRSPTVPVLFHIQGF-LLSLMNPSAEGRLFYSKEQ- 549
Query: 431 HVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMN 490
D QL KY+ L+P F+++ E + +IIL GT+SPM
Sbjct: 550 --GDIQL---KYM------------------LLDPTNQFRELVEDARAIILAGGTMSPMT 586
Query: 491 SFSSELGVQFGT----CLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTAD-------- 538
+ + L HVI + ++ + G + +Y D
Sbjct: 587 DYMNHLFSYVPASRLDTFSYGHVIPPE-NLIAHTLVRGVQGSEFDFTYDARDSEKMIMDL 645
Query: 539 --------------------GYKLMEKLCNRWR-----ETGQ--WSRLNAKKPLFVEPKG 571
Y + ++ N W+ E GQ ++ + KKP+ E +
Sbjct: 646 GRTIATLCHVIPDGVVAFFPSYDYLGRVLNIWKKPMLGEQGQTVYNLIGQKKPILSESRD 705
Query: 572 GSQEDFEIVLKHYYNSISQGSKCAVVRKKRVK-REGNNDLNTIESQENANKKGASFLAVC 630
+ E+ L Y N++ G ++ K EG N ++K G
Sbjct: 706 MTVTTEEL-LHTYANTVDSGRGALLLSVVGGKLSEGIN---------FSDKLG------- 748
Query: 631 RGKIVVGIPFPNINDIQVSLKKKY-----------NDTYRSSKNLLSGNEWYCNQAFRAL 679
RG ++VG+PFPNI K +Y ++ R +G ++Y N RA+
Sbjct: 749 RGVLIVGLPFPNIRSAVWQAKIQYIEQKTHQQATGSEASRQLAAKAAGRDFYENSCMRAV 808
Query: 680 NQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSI 720
NQ IGR IRHR DY AI+L+D R+++ +A + W+++S+
Sbjct: 809 NQCIGRAIRHRNDYAAIVLVDRRYEKPGIQAKLPAWIKQSM 849
Score = 51.6 bits (122), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 5/56 (8%)
Query: 28 PYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCK 83
PY PY QL M + S L++ + A+ ESPTGTGKSLSL+C +L W ++ K
Sbjct: 11 PYSPYDIQLQLMRALYSCLEQGKV-----AVFESPTGTGKSLSLICGSLTWLRDHK 61
>gi|398396280|ref|XP_003851598.1| hypothetical protein MYCGRDRAFT_86617 [Zymoseptoria tritici IPO323]
gi|339471478|gb|EGP86574.1| hypothetical protein MYCGRDRAFT_86617 [Zymoseptoria tritici IPO323]
Length = 825
Score = 143 bits (361), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 161/681 (23%), Positives = 275/681 (40%), Gaps = 139/681 (20%)
Query: 146 IFYASRTHSQISQVISEYKKTAY-------------------RVPMAVLASRKHYCTNKY 186
IF+ SRTHSQ+SQ + E K+ + L SRK+ C N+
Sbjct: 194 IFFCSRTHSQLSQFVGELKRVGLPPGFPPADLKNSGTVEPTEELKHLTLGSRKNLCINEK 253
Query: 187 VR---DKENIDEECKLLL-----GDRNLGCPQFKN----VHKVRGHPSLQKGGCHEVHDI 234
V + I+E+C L D+ G K+ V + R H ++ DI
Sbjct: 254 VNKLTSQTAINEKCIELQQSTTPTDKKCGFLPNKDSEDVVLEFRDH------ALAKIRDI 307
Query: 235 EDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHN 294
EDL +G ++ C YYA+R A++V PY ++ R A+ +++KG ++I+DEAHN
Sbjct: 308 EDLATLGSKLQICPYYASRPGIGHAEMVTLPYPLLLQKAAREALGINLKGHVVIIDEAHN 367
Query: 295 IEDIARDAGSVDID--------EDVLLKLQMELEQVCSVNPMIYQPLIEMTQDLV----- 341
+ SV I + +++ LQ ++ N ++ + L+
Sbjct: 368 LMSAVEGIYSVQISDAQLNRARDSLMVYLQKFRNRLKGSNRSYVTQVVRVIDSLLQFTRS 427
Query: 342 -------GWIERRKATLAKREFQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIK 394
G + A LA + K +R + E+ ++R+ + K+
Sbjct: 428 VQDEKTPGSVVAASALLAGKSVDQI----NLSKLIRYINESKLARK---VEGYSVYKSQF 480
Query: 395 EATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNW 454
EA D S + V TL +HV ++ LAL S+ W
Sbjct: 481 EAGDC-STPQQVEKADVPTL---------------THVQNFLLALMN----PSREGRFLW 520
Query: 455 TH-----TLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFG--TCLEAP 507
+ T+ L+P+ F++V E + ++IL GT+SPM + +L T
Sbjct: 521 SKEDKNITIRYLLLDPSEHFREVVESARAVILAGGTMSPMEEYKQQLFPYLDSITTFSCG 580
Query: 508 HVI------------DVDLQVLTSVISTGPDNYPLNASYKTAD--------------GYK 541
H+I D+D +V + D L A+ Y
Sbjct: 581 HLIPPSSLYVRAITSDIDGRV-DFTFKSRTDATALRLGRALAEIAKKVKGGMIVFFPSYS 639
Query: 542 LMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKR 601
+E W+ +S+ A KP+F + + G+ E + Y +I+ S +
Sbjct: 640 YLESTLAFWKTQPIFSQFEAIKPVFCDERSGAAE---TTFRTYSEAIAGSSTRGAIL--- 693
Query: 602 VKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYNDTY--- 658
L+ I + + A L C +VVG+P+PN+ + K +Y +
Sbjct: 694 --------LSVIGGKLSEGINFADDLGRC--VVVVGLPYPNLETPEWKSKMQYLEEQAGT 743
Query: 659 RSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRK 718
R + E+ N R++NQAIGR IRH+ D+ +I+L D R+ ++R R+ + W+R
Sbjct: 744 RGEAKRTASREYAENVCMRSVNQAIGRVIRHKDDWASILLFDARYADDRIRSKLPGWIRS 803
Query: 719 SI--KQYDSFDASLEGLKSFF 737
S+ K + + GL++FF
Sbjct: 804 SVDEKTDGRVEGVVAGLEAFF 824
Score = 47.8 bits (112), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Query: 28 PYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCKLKNQ 87
P+ PY Q FM V ++ ++ + ESPTGTGKSLSL+C L W + K K
Sbjct: 9 PFTPYDIQQQFMEAVYKCIEESK-----VGIFESPTGTGKSLSLICGALTWLRENKRKTY 63
Query: 88 LANISHSKPDTE 99
I+ D E
Sbjct: 64 GEAIATVDIDDE 75
>gi|242814468|ref|XP_002486375.1| DNA helicase, putative [Talaromyces stipitatus ATCC 10500]
gi|218714714|gb|EED14137.1| DNA helicase, putative [Talaromyces stipitatus ATCC 10500]
Length = 860
Score = 143 bits (361), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 169/710 (23%), Positives = 294/710 (41%), Gaps = 167/710 (23%)
Query: 146 IFYASRTHSQISQVISEYKKTAY-----------------------RVPMAVLASRKHYC 182
I+Y SRTHSQ+SQ E ++ + L SRK C
Sbjct: 198 IYYCSRTHSQLSQFAQELRRVTLPSSLPPLQENADAEQKEHAELEEVIKHLTLGSRKQLC 257
Query: 183 TNKYVRDKEN---IDEECKLL-----LGDRN---LGCPQFKNVHKVRGHPSLQKGGCHEV 231
N V + N I+E C L D+ L +F++V + V
Sbjct: 258 INPRVLNLGNATAINERCMELQQSGVAADKKCSYLPRKEFEDVQ-----LDFRDRVLSTV 312
Query: 232 HDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDE 291
DIED+ VG+ + C YYAAR + D +++ PY ++ R A+++ ++ ++I+DE
Sbjct: 313 QDIEDITQVGKQLSICPYYAARKVIDQCEIITLPYPLLLQRSSREALDLSLRDHVVIIDE 372
Query: 292 AHNIEDIARDAGSVDIDEDVLL-----------KLQMELEQVCSVN-PMIYQPLIEMTQD 339
AHN+ D + SV + D L K Q L+ V + + + + ++
Sbjct: 373 AHNLMDAISNIHSVSVTLDQLRTSLFQLTTYARKFQTRLKGKNRVYVTQVIRLVSALAEN 432
Query: 340 LVGWIERRKATLAKREFQHFFSCWTGD-----KALRELQEANISRQCFPILLECATKAIK 394
L ++ K++ A ++ S D K R LQE+ ++R+ + K K
Sbjct: 433 LQSLSQKHKSSEAVVQYSDLVSGKGVDQINPYKLTRYLQESKLARKVDGYVEHANNKNDK 492
Query: 395 EATDTESELPHLSGMSVITLEGLFSSLTYFFS-RNGSHVSDYQLALQKYIKRDSKNPGGN 453
A+ E+ T+ LF ++ + N S + QL L +K GG
Sbjct: 493 IASGKETR-------DKTTVPVLFQVQSFILTLMNPS--DEGQLFL-------NKTDGGV 536
Query: 454 WTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTC----LEAPHV 509
L L+P F+D+ + + ++IL GT+SPM+ ++ L + HV
Sbjct: 537 ---ILRYMLLDPTNHFRDIVDEARAVILAGGTMSPMSDYADHLFSYLSSAKLDTFSFGHV 593
Query: 510 I---DVDLQVLTSVISTGPDNYPLNASYKTADG--------------------------Y 540
I ++ ++L + N+ + +T+D Y
Sbjct: 594 IPPKNLTARILAKGVLGNDFNFIFDQ--RTSDSMITDLGQTIANLCAVIPDGVVAFFPSY 651
Query: 541 KLMEKLCNRWRETGQ-----WSRLNAKKPLFVEPKGGSQE-DFEIVLKHYYNSISQGSKC 594
+ ++ N WR+ + ++ + +KP+ E +E + + VL Y + GS
Sbjct: 652 DYLNQVLNTWRKPSKTGGSIFAEIEKRKPIVYESNNQKKESNTDDVLLEYSKKVESGSGA 711
Query: 595 AV--VRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNIN-------- 644
+ V R+ EG N ++K G RG ++VG+PFPNI+
Sbjct: 712 LLLSVVGGRLS-EGIN---------FSDKLG-------RGVLIVGLPFPNIHSAVWKAKI 754
Query: 645 ----------------DIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIR 688
++ VS +++ T +++ G +++ N RA+NQ IGR IR
Sbjct: 755 GHIEKQTFAKLTQNESELPVSKRREAEITAKAA-----GRDFFENSCMRAVNQCIGRAIR 809
Query: 689 HRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
HR DY AI+L+D R++ +R + + W+R+S+ S EGL+SFF+
Sbjct: 810 HRNDYAAIVLIDRRYETQRIQEKLPAWIRQSL--VSSTSNIREGLRSFFK 857
Score = 54.3 bits (129), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 37/68 (54%), Gaps = 5/68 (7%)
Query: 24 QVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCK 83
Q PY PY QL FM + ++ + + ESPTGTGKSLSL+C L W ++ K
Sbjct: 4 QFHHPYTPYDIQLEFMSALYDCIEAGKV-----GIFESPTGTGKSLSLICGALTWLRDHK 58
Query: 84 LKNQLANI 91
K L +I
Sbjct: 59 RKEFLKSI 66
>gi|295671522|ref|XP_002796308.1| DNA repair helicase RAD3 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226284441|gb|EEH40007.1| DNA repair helicase RAD3 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 797
Score = 143 bits (361), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 191/812 (23%), Positives = 334/812 (41%), Gaps = 186/812 (22%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+ + + V FPY + Y Q +MC + TLD GHC +LE P+GTGK++SLL +
Sbjct: 3 FFIDDLPVLFPYPRIYPEQYAYMCDLKKTLDAG---GHC--VLEMPSGTGKTVSLLSLII 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAM-NN 135
A+QQ+ + +L S + + E L + + T G T++ + +
Sbjct: 58 AYQQHKPEQRKLIYCSRTMSEIEKALAELKALMKYRAQQLGYTEDFRGLGLTSRKNLCLH 117
Query: 136 KNVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDE 195
+VK++ + TI A R S + + E K+ V + + EN+D
Sbjct: 118 PSVKREKSGTIVDA-RCRSMTAGFVKEKKERGEDVELCIY--------------HENLD- 161
Query: 196 ECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSM 255
LL NL P V ++D++ G+ + C Y++ R M
Sbjct: 162 ----LLEPSNLVPPG--------------------VFTLDDMLKYGEQHKQCPYFSVRRM 197
Query: 256 ADDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLK 314
++ Y Y+++P I + ++ K +I++ DEAHNI+++ ++ S+D+ ED L K
Sbjct: 198 MPFCNVIIYSYHYLLDPKIAERVSQELSKDSIVVFDEAHNIDNVCIESLSIDLTEDSLRK 257
Query: 315 -------LQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDK 367
L+ ++++ S++ + L Q LV + R+A A++E Q + D
Sbjct: 258 ASRGANNLERRIDEMKSLDA---EKLQNEYQKLVEGL--READEARQEEQLMANPALPDD 312
Query: 368 ALRELQEANISR-QCFPILLECATKAIK---EATDTESELP-----HLSGMSVI------ 412
L+E NI R + F L+ + +K + T T SE P HL ++ I
Sbjct: 313 LLKEAVPGNIRRAEHFVAFLKRFIEYLKTRMKVTHTISETPPSFLAHLKDLTFIERKPLR 372
Query: 413 -----------TLEGL-------FSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNW 454
TLE + + F + ++ + L L+ + + P
Sbjct: 373 FCAERLTSLVRTLELMNLEDYQPLQQVAAFATLAATYEKGFLLILEPFESDTATVPNP-- 430
Query: 455 THTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDL 514
L CL+ A+ K V + S+I+TSGTLSP+ + LG F T L+ + + +
Sbjct: 431 --ILHFTCLDAAIAIKPVFDRFSSVIITSGTLSPLEMYPKMLG--FTTVLQESYSMTLAR 486
Query: 515 Q-VLTSVISTGPDNYPLNASYK---------------------TADG-------YKLMEK 545
+ L +++ G D +++S++ T DG Y ME
Sbjct: 487 RSFLPMIVTRGSDQAQISSSFQIRNDPGVVRNYGNLLLEFSRITPDGIVVFFPSYLYMES 546
Query: 546 LCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKRE 605
+ + W+ G + K + VE SQE + L+ Y + G
Sbjct: 547 IISMWQGMGILDSIWNYKLILVETP-DSQES-SLALETYRTACCNG-------------- 590
Query: 606 GNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSL 650
+GA L V RGK I +G+PF +
Sbjct: 591 ----------------RGAILLCVARGKVSEGIDFDHHYGRTVICIGVPFQYTESRILKA 634
Query: 651 KKKY-NDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNR 709
+ ++ + YR + N++ A R Q +GR +R + DYG ++L D RFQ + R
Sbjct: 635 RLEFLRENYR-----IRENDFLSFDAMRHAAQCLGRVLRGKDDYGVMVLADRRFQ--KKR 687
Query: 710 AHISKWLRKSIKQYD---SFDASLEGLKSFFR 738
A + KW+ +++ + + S D ++ KSF R
Sbjct: 688 AQLPKWISQAMLESETNLSTDMAMATAKSFLR 719
>gi|452840275|gb|EME42213.1| hypothetical protein DOTSEDRAFT_81172 [Dothistroma septosporum
NZE10]
Length = 836
Score = 143 bits (361), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 167/685 (24%), Positives = 274/685 (40%), Gaps = 131/685 (19%)
Query: 146 IFYASRTHSQISQVISEYKKTAYRVPMAV----------------------LASRKHYCT 183
+F+ SRTHSQ+SQ + E ++ R+P A+ SRK+ C
Sbjct: 194 VFFCSRTHSQLSQFVGELRRV--RMPPALPSEKTDGRDDSEQSTEQLKHLTFGSRKNLCI 251
Query: 184 NKYVRD---KENIDEECKLLLGDRNL--GCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLV 238
N V + I+E C L + + CP + ++ DIEDL
Sbjct: 252 NSKVNQLSSQVAINERCIELQQAKTVETKCPYMPTKDNEAQVLEFRDHALAKIRDIEDLA 311
Query: 239 NVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDI 298
+G C YYA+R A++V PY ++ R A+ + +KG ++I+DEAHN+ +
Sbjct: 312 QLGAKREICPYYASRPAVGPAEIVTLPYPLLLQKSAREALGISVKGHVVIIDEAHNLMNA 371
Query: 299 ARDAGSVDIDE-------DVLL----KLQMELE--------QVCSVNPMIYQPLIEMTQD 339
S I + D L+ + + L+ QV V + Q M Q
Sbjct: 372 VESTYSAQISDLQLKRARDALIAYLQRFRHRLKGSNRSYVTQVVRVVDALLQFATRMRQG 431
Query: 340 LV-GWIERRKATLAKREFQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATD 398
V G A LA + K +R + ++ ++R+ + AT EA
Sbjct: 432 NVNGGTISPSALLAGKGVDQINLA----KLVRYINDSRLARKVEGYVKFVATI---EAEQ 484
Query: 399 TESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTH-- 456
T S+ V+ + L +HV ++ L L S+ W+
Sbjct: 485 TRSQTKSNDRGEVVDVPTL------------THVQNFLLTLMN----PSREGRFLWSKME 528
Query: 457 ---TLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSEL-----GVQFGTC--LEA 506
L L+P+ F+++ E + S+IL GT+SPM+ + +L +Q +C L
Sbjct: 529 DGVALQYLLLDPSEHFREIVEDARSVILAGGTMSPMDDYRQQLFPYLHSIQTFSCDHLIP 588
Query: 507 PHV-------------IDVDLQVLTSVISTGPDNYPLNASYKTADG-------YKLMEKL 546
P ID + + N L S K G Y +EK+
Sbjct: 589 PSSLFVRAISSDEYGRIDFSFKARNDTSAVRLGNSILQISRKVKGGMVVFFPSYGYLEKV 648
Query: 547 CNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREG 606
+ W SRL K LF++ + S ED + Y +I+ + AV+
Sbjct: 649 LSIWASQKIKSRLEGLKALFLDGRAMSAED---TFRAYSETIANDPRGAVL--------- 696
Query: 607 NNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLS 666
L+ I + + + L C +VVG+P+PN+ + K +Y D + +
Sbjct: 697 ---LSVIGGKLSEGINFSDNLGRC--VVVVGLPYPNLETPEWIAKMQYLDDKAACRGEAK 751
Query: 667 GN---EWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQY 723
G E N R++NQAIGR IRH+ D+ +I+L D R+ E R + + +W++ S
Sbjct: 752 GKASREHAENVCMRSVNQAIGRAIRHKNDWASILLFDARYAEGRVQTKLPRWIKTSC--- 808
Query: 724 DSFDASLEG-LKSFFRDVKGWVGKK 747
DA + G L D+ G+ +K
Sbjct: 809 ---DAKVSGALAGVVADLGGFFEQK 830
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 34/59 (57%), Gaps = 5/59 (8%)
Query: 28 PYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCKLKN 86
P++PY QL FM + ++ + ESPTGTGKSLSLLC++L W + K K
Sbjct: 9 PFEPYSIQLDFMTAMYDCIEEG-----SVGIFESPTGTGKSLSLLCASLTWLREHKRKT 62
>gi|256075476|ref|XP_002574045.1| regulator of telomere elongation helicase 1 rtel1 [Schistosoma
mansoni]
Length = 1120
Score = 143 bits (360), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 99/339 (29%), Positives = 158/339 (46%), Gaps = 68/339 (20%)
Query: 452 GNWTHTLSLWCLNPAVVFKDVAELSLS-IILTSGTLSPMNSFSSELGVQFGTCLEAPHVI 510
G T+S WC +P + + + ++ IILTSGTL P+ +EL ++F L PHVI
Sbjct: 433 GTTNRTISYWCFSPGRAIQQLIQQNVRCIILTSGTLYPVEPIEAELNLKFPITLRNPHVI 492
Query: 511 DVDLQVLTSVISTGPDNYPLNASYKTAD----------------------------GYKL 542
+ D Q+ S+I GPD LNA+Y + Y
Sbjct: 493 NPD-QLNLSIIPRGPDGEKLNATYSVRETSAYRNSLGLLLIQLADVVPAGLLIFFPSYSF 551
Query: 543 MEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSI----SQGSKCAVVR 598
M + W++ + +L+ K +F+EP+ +Q F + Y + S G+ V
Sbjct: 552 MSQCIEYWKDGDVYEKLSRSKHIFIEPREKNQ--FNKIFNEYRKTACIENSVGAILFAVM 609
Query: 599 KKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKY---- 654
+ RV EG ++ +NA RG ++GIP+ I+D +VSLK Y
Sbjct: 610 RGRVS-EG------LDLADNAG----------RGVFILGIPYAPIHDPRVSLKMAYLDEQ 652
Query: 655 ------NDTYRSSKNLL-----SGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERF 703
N T+ + L +G +WY QA+RA+NQA+GR IRH DYG I L DERF
Sbjct: 653 FVKLKSNSTHDQLQKTLIDKYPTGRQWYNLQAWRAINQAVGRVIRHYKDYGIIYLCDERF 712
Query: 704 QEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFRDVKG 742
+ +++ W++ K Y++ + ++ FFR+++
Sbjct: 713 ASNNAQLNLAGWMQTKCKVYNNVELVVKDTDEFFRNMRN 751
Score = 130 bits (326), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 90/279 (32%), Positives = 139/279 (49%), Gaps = 31/279 (11%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ G++++FPYQPY Q +M +V+ +L+ + HA+LESPTGTGK+L LLC++LAW
Sbjct: 6 IDGVEIDFPYQPYDCQFEYMTKVLLSLNEGK-----HAILESPTGTGKTLCLLCASLAWL 60
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVK 139
QL + + +K N G P S S A + N K
Sbjct: 61 DKQANSVQLISATDAKHQ---------NTMGKRPTSDNVDNALSHQNFLASLGKVNNGCK 111
Query: 140 KKMTPTIFYASRTHSQISQVISEYKKTAY-RVPMAVLASRKHYCTNKYVRDKENIDEE-- 196
I YASRTHSQ++Q I+ K T Y R ++V+ SR C V E+ +
Sbjct: 112 ------IIYASRTHSQLAQAINALKGTVYSRRSVSVVGSRDQLCLLPDVTSLESNSAKIY 165
Query: 197 -CKLLLGDRNLGCPQFKNVHKVRGH--PSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAAR 253
C++ + R C F+N R +L+ G + DIEDL N GQ ++ C Y+ +R
Sbjct: 166 ACRMRVQTRT--CEYFRNFDSKRDEILTNLKSEG---IVDIEDLSNYGQKIKCCPYFISR 220
Query: 254 SMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEA 292
+ D+ L+F PY+Y+++P + + + IL E+
Sbjct: 221 ELKTDSSLIFMPYNYVLDPRVMRERVCSVGYYVSILLES 259
>gi|328770056|gb|EGF80098.1| hypothetical protein BATDEDRAFT_11514, partial [Batrachochytrium
dendrobatidis JAM81]
Length = 604
Score = 143 bits (360), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 162/623 (26%), Positives = 261/623 (41%), Gaps = 125/623 (20%)
Query: 175 LASRKHYCTNKYV---RDKENIDEECKLLLGDRNL----GCPQFKN--VHKVRGHPSLQK 225
L SRK+ C N+ V + I+++C L D++ GCP V V ++
Sbjct: 7 LGSRKNLCINQSVTRLQSLHRINDKCLDLQKDKSSKSSGGCPYLTEDPVQMVTFDDTIHA 66
Query: 226 GGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGA 285
+ DIE++V G+ C YY AR A ++++ PY+ ++ R ++ + +K
Sbjct: 67 ----RIRDIEEIVQAGRKSATCPYYGARHTAKSSEIICIPYNLLLQRSTRESIGLRLKNN 122
Query: 286 ILIL---------DEAHNIEDIARDAGSVDIDEDVLLKLQMELEQVCS--VNPMIYQPLI 334
I+IL DEAHNI + S I D +L + L + N + + ++
Sbjct: 123 IIILGKYTLFCLLDEAHNIIESVNSLYSHTISLDQILDCKTHLSKYFERYKNRLAGRNMV 182
Query: 335 EMTQDLVGWIERRKATLAKREFQHFFSCWTG-DKA-------LRELQEANISRQCFPILL 386
+ Q LV A + +E H S DKA + L SR F +L
Sbjct: 183 YVKQLLVLLDTPYSAAKSAQESNHAMSVSEFVDKAGIDHFNLFKILTYLENSRLPFKLLG 242
Query: 387 ECATKAIKEATDTESELP-HLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKR 445
++ KE ++T + +P +S +S ++ +SLT NG V +Y
Sbjct: 243 FAVSETRKENSETANFIPTSVSPLSF--MQSFLASLTDP-DVNGRIVYNY---------- 289
Query: 446 DSKNPGGNWTH-TLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSEL--GVQFGT 502
S +P H LNPA F + + + S++ T GT+SP++ F +L VQ
Sbjct: 290 -STDPH----HCVFKYLLLNPADCFAPILKQARSVVFTGGTMSPIHDFIEQLLPSVQHDR 344
Query: 503 --CLEAPHVIDVDLQVLTSVISTGPDNYPLNASY-KTAD--------------------- 538
HVI+ +L +S GP N S+ K D
Sbjct: 345 LDVFSCGHVIN-STSLLPICVSQGPTGLDFNFSHEKRVDTNMMDEAGAAIANYSNVISGG 403
Query: 539 ------GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGS 592
Y ++ + +W+ G W+R++ KK +F+EP + D VL+ Y ++IS
Sbjct: 404 IVVFFVSYSYLDAIVKQWKSGGIWTRISKKKKIFIEPTSVGEVD--KVLQDYSSTIS--- 458
Query: 593 KCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVG 637
R D +T + G+ LAV GK I+VG
Sbjct: 459 -----------RSRQTDFST------STLTGSMLLAVVSGKLSEGINFADDMGRAVIMVG 501
Query: 638 IPFPNINDIQVSLKKKYNDTYRSSKNL---LSGNEWYCNQAFRALNQAIGRCIRHRFDYG 694
IPF NI I++ + ++ D ++K ++G E+Y N R L GR IRH+ DY
Sbjct: 502 IPFANIASIELQERMRFFDVQVNAKETGSGITGKEYYENICMRVLCFVTGRAIRHKNDYA 561
Query: 695 AIILLDERFQEERNRAHISKWLR 717
II LD RF+ +R A + +W+R
Sbjct: 562 VIIFLDMRFKRDRIVAKLPEWIR 584
>gi|453084594|gb|EMF12638.1| DNA repair helicase [Mycosphaerella populorum SO2202]
Length = 838
Score = 142 bits (359), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 164/668 (24%), Positives = 266/668 (39%), Gaps = 112/668 (16%)
Query: 146 IFYASRTHSQISQVISEYKKTAYRVPMA----------------------VLASRKHYCT 183
I++ SRTHSQ+SQ I E K+ R+P L SR++ C
Sbjct: 196 IYFCSRTHSQLSQFIGELKRV--RLPPGYPPEQKDSRGKAGEMTEELKHLTLGSRQNLCI 253
Query: 184 NKYVRDKEN---IDEECKLLLGDRNLG------CPQFKNVHKVRGHPSLQKGGCHEVHDI 234
N V I+E C L + PQ + H V + E+ DI
Sbjct: 254 NARVNKLPTLTAINERCSELQQPKTPADKKCQYLPQKDSEHVVL---DFRDHALAEIRDI 310
Query: 235 EDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHN 294
EDL +G ++ C YYA R A++V PY ++N R A+ + +KG ++I+DEAHN
Sbjct: 311 EDLAKLGSKLQICPYYAVRPGIGHAEVVTLPYPLLLNKASREALGISLKGHVVIIDEAHN 370
Query: 295 IEDIARDAGSVDIDEDVLLKLQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKR 354
+ + S I E L+LQ V + L + + V I + A+L
Sbjct: 371 LMESVESIHSASITE---LQLQQAKAGVAEYYRKFNKRLKDKNRAYVTQIIKVVASLL-- 425
Query: 355 EFQHFFS---------CWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPH 405
HF S T AL Q A+ Q + L K A E + H
Sbjct: 426 ---HFMSNVRQQSSDGNITTANALLATQGAD---QINLVKLVHYITESKLARKVEGYITH 479
Query: 406 LSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSL--WCL 463
L+ S +H+ ++ L R+ + + T+++ L
Sbjct: 480 LARAEATRARKPVSDSAAAEVPTLTHLQNFLPCLMN-PAREGRFTWVKYDGTIAVKYMLL 538
Query: 464 NPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFG--TCLEAPHVIDVDLQVLTSVI 521
+PA F+++ E + ++IL GT+SPM + +L T H+I + ++
Sbjct: 539 DPAEHFRNIVEEARAVILAGGTMSPMEDYKQQLFPYLDDITTFSCGHLIPSSNLFVRTI- 597
Query: 522 STGPDNYPLNASYKTAD--------------------------GYKLMEKLCNRWRETGQ 555
T N ++ ++K + Y +E + W G
Sbjct: 598 -TSDQNGSIDFTFKCREKNMIRAGHALLQIVPKVRGGMVVFFPSYSYLEAVHRAWNSAGL 656
Query: 556 WSRLNAKKPLFVEPKGGSQED-FEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIE 614
SRL A+KP + +G + D F + + ++G+ V ++ EG N N +
Sbjct: 657 TSRLEAQKPTIYDTRGTAGSDPFASYKTAIHVNPTRGALLLSVIGGKLS-EGINFSNEL- 714
Query: 615 SQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSG---NEWY 671
R +V+G+PFPN ND K +Y + + G E
Sbjct: 715 ---------------GRCVVVIGLPFPNYNDPDWKAKMQYLEERAKQRGEPKGRASRERG 759
Query: 672 CNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSI--KQYDSFDAS 729
N R++NQAIGR IRH+ D+ +I+L DER+ +ER R + W+R + K + ++
Sbjct: 760 ENVTMRSVNQAIGRAIRHKDDWASILLFDERYDDERFRRKLPGWIRSCVDEKAAGNVESV 819
Query: 730 LEGLKSFF 737
+ L+ FF
Sbjct: 820 VRELERFF 827
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 5/58 (8%)
Query: 28 PYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCKLK 85
P+QPY Q FM V +++ + + ESPTGTGKSLSL+C +L W + K K
Sbjct: 9 PFQPYAIQQQFMEGVYDCIEQGKV-----GIFESPTGTGKSLSLICGSLTWLREHKRK 61
>gi|26348753|dbj|BAC38016.1| unnamed protein product [Mus musculus]
Length = 421
Score = 142 bits (358), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/135 (49%), Positives = 90/135 (66%), Gaps = 17/135 (12%)
Query: 621 KKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKKYNDTYRSSKNLL 665
K GA +AVCRGK I VGIPFPN+ D+QV LK++YND + S+ LL
Sbjct: 2 KDGALLIAVCRGKVSEGLDFSDDNARAVITVGIPFPNVKDLQVELKRQYNDHHSKSRGLL 61
Query: 666 SGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNR--AHISKWLRKSIKQY 723
G +WY QA+RALNQA+GRCIRH+ D+GA+IL+D+RF NR + +SKW+R+ I+ +
Sbjct: 62 PGRQWYEIQAYRALNQALGRCIRHKNDWGALILVDDRFNNNPNRYISGLSKWVRQQIQHH 121
Query: 724 DSFDASLEGLKSFFR 738
SF ++LE L F R
Sbjct: 122 SSFASALESLTEFSR 136
>gi|341878721|gb|EGT34656.1| hypothetical protein CAEBREN_18601 [Caenorhabditis brenneri]
Length = 830
Score = 142 bits (357), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 170/680 (25%), Positives = 281/680 (41%), Gaps = 127/680 (18%)
Query: 146 IFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYV-RDKEN--IDEECKLLLG 202
IFYASRTHSQ+ Q+I E +KT ++ + SR C N V + K N I+E+C L
Sbjct: 183 IFYASRTHSQLDQLIEELEKTRFQPRVVTCGSRGTLCVNDEVMKLKLNHLINEKCMEL-- 240
Query: 203 DRNLGCPQFKNVHKVRGHPSLQKGGC------HEVHDIEDLVN---------------VG 241
+N + K G S +K C + IE+LVN G
Sbjct: 241 RKNGTSEKEKKQKTEEG--SKKKKSCATSCEYYNSTQIEELVNGVLANKFKTSAQLKSQG 298
Query: 242 QVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARD 301
GC Y+A R QLV PY +++ R A +D+K ++ILDEAHN+
Sbjct: 299 SASHGCPYFATRKSIPQCQLVLLPYQVLLHEGTRNAWGIDLKDNVIILDEAHNVLSTINS 358
Query: 302 AGSVDIDEDVL---LKLQMELEQ-----VCSVNPMIYQPLIEMTQDLVGWIERRK----A 349
S +I E L LKL E + + + N + + L ++T ++ +++
Sbjct: 359 LYSAEISEKSLALALKLIREYNEKYKLRLKAKNLLYMKQLEQLTSKMITFLKSESKEDVM 418
Query: 350 TLAK-------------------------REFQHFFSCWTGDKALRELQEANISRQCFPI 384
T+A+ ++F F+ + ++ +E ++ ++ +
Sbjct: 419 TMAQLSRNLNILGINLFKLATYIEKTDLCKKFHGFYVQFQRNEVKKENEKPKLT-GIQKL 477
Query: 385 LLECATKAIKEATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIK 444
L + K + A ++E P + +L+ SLT + D ++ + K
Sbjct: 478 LAKKDEKPEETAEESEPAPPKTVSSPLFSLKSFIDSLT-------NKCEDGRIIVDK--- 527
Query: 445 RDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELG------- 497
+ +P + LNPA +V + S +L GT+ P L
Sbjct: 528 --TADPKFRYI------LLNPADRLAEVLKACRSTVLVGGTMEPAQLLVETLSRGSIGPD 579
Query: 498 -VQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTADGYKLMEKLCNRWRETGQW 556
++ +C HVI+ D Q+L I+ D P +Y+T + ++ L + Q
Sbjct: 580 SIRRFSC---SHVIN-DSQLLAVTINKTVDGKPFRLTYQTRSLPETLKSLARSIQVLSQ- 634
Query: 557 SRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRV---KREGNNDLNTI 613
L +FV DF LK I + RKK V R+ +D+
Sbjct: 635 -HLPNGVVIFV-----PSYDFLFELKK--KMIETKILEQIERKKSVFTETRQSTSDVFKR 686
Query: 614 ESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKKYNDTY 658
S+ KGA F AV GK IV+G+PFPN +++ + ++ D+
Sbjct: 687 FSEAAKTPKGAIFFAVIGGKMSEGINFSDELGRAVIVIGLPFPNKTSVELRERMRFLDSQ 746
Query: 659 RSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRK 718
+ GN Y + A+NQAIGR IRHR DY A+ L DERF ++ ++ +S W+
Sbjct: 747 MPN----GGNMLYESLCMHAVNQAIGRAIRHRNDYAAVYLFDERFSQDSIKSKLSSWIGD 802
Query: 719 SIKQYDSFDASLEGLKSFFR 738
+ F ++ ++FF+
Sbjct: 803 RTQTNLGFTEIIQKSQAFFK 822
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 36/58 (62%), Gaps = 5/58 (8%)
Query: 24 QVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQN 81
+ FP++PY QL M + L++ + + ESPTGTGKSLS+LCST+ W +N
Sbjct: 3 EFSFPFKPYDIQLRLMREIRDCLEQGK-----VGIFESPTGTGKSLSVLCSTMTWLEN 55
>gi|205716435|sp|A8MPP1.1|D11L8_HUMAN RecName: Full=Putative ATP-dependent RNA helicase DDX11-like
protein 8; AltName: Full=DEAD/H box protein 11-like 8
Length = 907
Score = 141 bits (356), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 171/740 (23%), Positives = 287/740 (38%), Gaps = 214/740 (28%)
Query: 146 IFYASRTHSQISQVISEYKKTAY--RVPMAVLASRKHYCTNKYVRD---KENIDEECKLL 200
I++ SRTHSQ++Q + E KK+ + V + L SR++ C N+ VR + I++ C +
Sbjct: 231 IYHCSRTHSQLAQFVHEVKKSPFGKDVRLVSLGSRQNLCVNEDVRSLGSVQLINDRCVDM 290
Query: 201 LGDRNL-------------------GCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVG 241
R+ CP F N H+ G L+ EV D+E L+ +G
Sbjct: 291 QRSRHEKKKGAEEEKPKRRRQEKQAACP-FYN-HEQMG--LLRDEALAEVKDMEQLLALG 346
Query: 242 QVVRGCSYYAARSMADDAQLVFCPYSYIINPV-------------------------IRG 276
+ R C YY +R A+LV PY +++ I G
Sbjct: 347 KEARACPYYRSRLAIPAAKLVVLPYQMLLHAATRQAAGIRLQDQVVIIDEAHNLIDTITG 406
Query: 277 AMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMEL----------------- 319
V++ G+ L + ++ + R + + LK + L
Sbjct: 407 MHSVEVSGSQLCQAHSQLLQYMERYGKRLKAKNLMYLKQILYLLEKFVAVLGGNIKQNPN 466
Query: 320 --------EQVCSVNPMIYQPLIE---------------MTQDLVGWIERRKATLAKRE- 355
++ ++N ++Q I+ +++ L G+ ER A + RE
Sbjct: 467 TQSLSQTGTELKTINDFLFQSQIDNINLFKVQRYCEKSMISRKLFGFTERYGAVFSSREQ 526
Query: 356 -----FQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMS 410
FQ F L+ LQ P A ++++ +P +
Sbjct: 527 PKLAGFQQF---------LQSLQPRTTEALAAP------------ADESQASVPQPAS-P 564
Query: 411 VITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFK 470
++ +EG ++LT +++G + Q +L + TL LNPAV F
Sbjct: 565 LMHIEGFLAALTTA-NQDGRVILSRQGSLSE--------------STLKFLLLNPAVHFA 609
Query: 471 DVAELSLSIILTSGTLSPMNSFSSEL----GVQFGTCLE--APHVIDVDLQVLTSVISTG 524
V + ++++ GT+ P++ F +L GV+ +E HVI D + VI +G
Sbjct: 610 QVVKECRAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHVIPPD--NIPLVICSG 667
Query: 525 PDNYPLNASYKTADGYKLMEK----LCN------------------------RWRETGQW 556
N PL +++ D ++M++ LCN W + G
Sbjct: 668 ISNQPLEFTFQKRDLPQMMDEVGRILCNLCGVVSGGVVCFFSSYEYLRQVHAHWEKGGLL 727
Query: 557 SRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQ 616
RL A+K +F EPK Q E VL Y I C Q
Sbjct: 728 GRLAARKKIFQEPKSAHQ--VEQVLLAYSRCIQ---ACG--------------------Q 762
Query: 617 ENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKKYNDTY--R 659
E A L+V GK ++VG+PFPNI ++ K Y D R
Sbjct: 763 ERGQVTEALLLSVVGGKMSEGINFSDNLGRCVVMVGMPFPNIRSAELQEKMAYLDQTLPR 822
Query: 660 SSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKS 719
+ G N +A+NQ+IGR IRH+ D+ +I+LLD+R+ A + W+R S
Sbjct: 823 APGQAPPGKALVENLCMKAVNQSIGRAIRHQKDFASIVLLDQRYARPPVLAKLPAWIRAS 882
Query: 720 IKQYDSFDASLEGLKSFFRD 739
++ +F ++ ++ F R+
Sbjct: 883 VEVKATFGPAIAAVQKFHRE 902
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 40/68 (58%), Gaps = 5/68 (7%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
VG I FP+ PY Q FM + L+ A + G + ESPTGTGKSLSL+C L+W
Sbjct: 8 VGAIHFPFPFTPYSIQEDFMAELYRVLE-AGKIG----IFESPTGTGKSLSLICGALSWL 62
Query: 80 QNCKLKNQ 87
++ + K +
Sbjct: 63 RDFEQKKR 70
>gi|238013860|gb|ACR37965.1| unknown [Zea mays]
Length = 274
Score = 141 bits (356), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/281 (33%), Positives = 147/281 (52%), Gaps = 39/281 (13%)
Query: 15 LNAYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCS 74
+ Y + G+ V+FP+ Y Q+ +M RVI +L + + +ALLESPTGTGK+L LLC+
Sbjct: 1 MPVYSIRGVNVDFPFDAYDCQITYMDRVIESLQQGK-----NALLESPTGTGKTLCLLCA 55
Query: 75 TLAWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMN 134
+LAW++ T + GGG + +P + +Q + +
Sbjct: 56 SLAWRR-----------------TFGEFLRVGRGGGGTKQ-----LPYGSQPSASQQSED 93
Query: 135 NKNVKKKMT--PTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKEN 192
+ + K++ + P I YASRTHSQ+ QVI E K T+YR MAVL SR+ C + V
Sbjct: 94 STSQKQQQSRYPVIIYASRTHSQLRQVIKELKATSYRPKMAVLGSREQMCIHDEVSKLHG 153
Query: 193 I--DEECKLLLGDRNLGCPQFKNVHK-VRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSY 249
+ C L R CP +V + ++ P L +E DIEDL+N+G+ C Y
Sbjct: 154 RAQNNACHFLCKKRR--CPHNNHVAEFIKNKPELG----NEPFDIEDLINIGRHKGPCPY 207
Query: 250 YAARSMADDAQLVFCPYSYIINPVIRGAME-VDIKGAILIL 289
Y +R ++ ++F PY+Y+I+P R ++ + A+LIL
Sbjct: 208 YISRELSKSVDILFAPYNYLIDPGNRRSLNGIPWDNAVLIL 248
>gi|403361814|gb|EJY80616.1| hypothetical protein OXYTRI_21994 [Oxytricha trifallax]
Length = 957
Score = 141 bits (356), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/300 (32%), Positives = 138/300 (46%), Gaps = 91/300 (30%)
Query: 23 IQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNC 82
++V FP++PY Q+ FM ++I++L +ALLESPTGTGK+LSLLC++LAW +N
Sbjct: 43 VEVMFPFKPYQCQINFMAKLINSLKLGD-----NALLESPTGTGKTLSLLCASLAWLKNE 97
Query: 83 KLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKKM 142
+ KN G F PPS KK
Sbjct: 98 REKN----------------------GRF---------PPSL-------------TDKKD 113
Query: 143 TPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEECKLLLG 202
I Y SRTHSQ+SQV E K TAY +LASR H C +
Sbjct: 114 YIQIIYTSRTHSQLSQVQRELKNTAYNPRSLLLASRDHMCVH------------------ 155
Query: 203 DRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLV 262
+FKN++ IE++ +G+ + C Y+ + A A ++
Sbjct: 156 ------AEFKNLN------------------IEEMCKLGEEMVICPYFGNKDRAAGADIL 191
Query: 263 FCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQV 322
F PY+++I+P IR E K +I+I DEAHN+ A DA S D+D L + EL+++
Sbjct: 192 FMPYNFLIDPKIREIFEFKFKNSIIIFDEAHNVPQQAEDASSFDLDTKQLEYVVNELQKL 251
Score = 108 bits (269), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/274 (31%), Positives = 130/274 (47%), Gaps = 57/274 (20%)
Query: 440 QKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELS-LSIILTSGTLSPMNSFSSELGV 498
+++++R SK L+ WC N + F+++ +L SIILTSGTL+PMNSF +EL +
Sbjct: 434 KQFMQRTSK-------RILAFWCFNAGICFRELQKLEPKSIILTSGTLTPMNSFQAELQL 486
Query: 499 QFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTADGYKLMEK-LCNRWRETGQWS 557
+F +E PHVI D QV SV++ G N SY+ Y+ EK L + Q S
Sbjct: 487 KFNQRIENPHVISTD-QVSISVLTKGIKQNCFNFSYQ----YRENEKALIDLGVSIAQIS 541
Query: 558 RLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIE--- 614
+ P G + ++ S +C + ++ RE +N N ++
Sbjct: 542 G--------ITPGG---------ILVFFPSYRYMRRCYELWEQNKPRELSNYKNVMDGYY 584
Query: 615 ----SQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKKYN 655
+ + + G L+VCRG+ I+VGIPFP + D +V LK+ Y
Sbjct: 585 RSIFEKTDDSLNGGILLSVCRGRISEGLDFSDNAARCVIIVGIPFPLLTDPKVILKRDYL 644
Query: 656 DTYRSSKN----LLSGNEWYCNQAFRALNQAIGR 685
D N LSG +WY RA+NQAIGR
Sbjct: 645 DRKLQQNNSDLVRLSGKDWYNQCGIRAVNQAIGR 678
>gi|239607217|gb|EEQ84204.1| DNA repair helicase RAD3 [Ajellomyces dermatitidis ER-3]
Length = 779
Score = 141 bits (356), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 187/799 (23%), Positives = 332/799 (41%), Gaps = 178/799 (22%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+ + + V FPY + Y Q +MC + TLD GHC +LE P+GTGK++SLL +
Sbjct: 3 FFIDDLPVLFPYPRIYPEQYAYMCDLKKTLDAG---GHC--VLEMPSGTGKTVSLLSLII 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNK 136
A+QQ+ + +L S + + E L K
Sbjct: 58 AYQQHRPEQRKLIYCSRTMSEIEKALAEL------------------------------K 87
Query: 137 NVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKEN---I 193
+ K T + YA +++ L SRK+ C + V+ +++ +
Sbjct: 88 ALMKYRTRQLGYA-----------EDFRGLG-------LTSRKNLCLHPSVKREKSGAVV 129
Query: 194 DEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAAR 253
D C+ L NL + N+ + G V ++D++ G+ + C Y++ R
Sbjct: 130 DARCRSLTAGFNLDLLEPSNL--------VPPG----VFTLDDIIKYGEQHKQCPYFSIR 177
Query: 254 SMADDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVL 312
M ++ Y Y+++P I + ++ K +I++ DEAHNI+++ ++ S+D+ ED L
Sbjct: 178 RMMPFCNVIIYSYHYLLDPKIAERVSQELSKDSIVVFDEAHNIDNVCIESLSIDLTEDSL 237
Query: 313 LK-------LQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTG 365
K L+ ++E++ S + + L Q LV + R+A A++E Q +
Sbjct: 238 RKASRGATNLERKIEEMKSSDA---EKLQNEYQKLVEGL--READEARQEEQLMANPALP 292
Query: 366 DKALRELQEANISR-QCFPILLECATKAIK---EATDTESELP-----HLSGMSVI---- 412
D L+E NI R + F L+ + +K + T T SE P HL ++ I
Sbjct: 293 DDLLKEAVPGNIRRAEHFVAFLKRFIEYLKTRMKITHTISETPLSFLAHLKDLTFIERKP 352
Query: 413 -------------TLEGL-------FSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGG 452
TLE + + F + ++ + L L+ + + P
Sbjct: 353 LRFCAERLASLVRTLELMNLEDYQPLQQVAAFATLAATYEKGFLLILEPFESETATVPNP 412
Query: 453 NWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDV 512
L CL+ A+ K V + S+I+TSGTLSP+ + L +F T L+ + + +
Sbjct: 413 ----ILHFTCLDAAIAIKPVFDRFSSVIVTSGTLSPLEMYPKML--KFTTVLQESYTMTL 466
Query: 513 DLQ-VLTSVISTGPDNYPLNASYK---------------------TADG-------YKLM 543
+ L V++ G D +++S++ T DG Y M
Sbjct: 467 ARRSFLPMVVTRGSDQAQISSSFQIRNDPGVVRNYGNLLLEFSRITPDGIVVFFPSYLYM 526
Query: 544 EKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVK 603
E + + W+ G + K + VE SQE + L+ Y + G ++ R K
Sbjct: 527 ESIISMWQGMGILDLVWNYKLILVE-TPDSQES-SLALETYRTACCNGRGAVLLCVARGK 584
Query: 604 REGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKY-NDTYRSSK 662
D + + G R I +G+PF + + ++ + YR
Sbjct: 585 VSEGIDFD--------HHYG-------RAVICIGVPFQYTESRILKARLEFLRENYR--- 626
Query: 663 NLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQ 722
+ N++ A R Q +GR IR + DYG ++L D RFQ + R+ + KW+ +++ +
Sbjct: 627 --IRENDFLSFDAMRHAAQCLGRVIRGKDDYGVMVLADRRFQ--KRRSQLPKWISQAMLE 682
Query: 723 YD---SFDASLEGLKSFFR 738
+ S D ++ KSF R
Sbjct: 683 SETNLSTDMAVATAKSFLR 701
>gi|389637597|ref|XP_003716432.1| DEAD_2 domain-containing protein [Magnaporthe oryzae 70-15]
gi|351642251|gb|EHA50113.1| DEAD_2 domain-containing protein [Magnaporthe oryzae 70-15]
Length = 921
Score = 141 bits (355), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 178/752 (23%), Positives = 298/752 (39%), Gaps = 190/752 (25%)
Query: 146 IFYASRTHSQISQVISEYKK-------------------TAYR--VPMAVLASRKHYCTN 184
IFY SRTHSQ++Q ISE ++ T R V L+SR+ C N
Sbjct: 204 IFYTSRTHSQLTQFISELRRPNFPSSFPGADEPSLSKTETGTRECVKHVPLSSRQKLCIN 263
Query: 185 KYVR---DKENIDEECKLLLGDRNLG----CPQFKNVHKVRGHPSLQKGGCHEVHDIEDL 237
V I++ C L + CP + + + + DIED
Sbjct: 264 PAVARLGSVAAINDRCTELQKSKAKSEGKRCPYVPSQDNLSETHQFRDASLATIPDIEDA 323
Query: 238 VNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIED 297
+G+ ++ C YYA R+ A++V PY ++ R A+ ++++G+++++DEAHNI D
Sbjct: 324 HKLGKSLQVCPYYATRTAIPGAEIVTLPYPLLLQKSARDALGIELQGSVVVVDEAHNIMD 383
Query: 298 IARDAGSVDIDEDVLLKLQMEL--------EQVCSVNPMIYQPLIEMTQDLVGWIERRKA 349
S +I + L + + L +++ + N ++ + + Q L W+ER
Sbjct: 384 AIAGVHSAEIRLEDLRRGREMLSIYAKRFGKKLKAENRIMVGQVARVIQGLSEWLER--- 440
Query: 350 TLAKREFQHFF---SCWTGDKALRE---------LQEANISRQCFPIL-----LECATKA 392
++ +H K + + +QE+ ++ + LE A+K
Sbjct: 441 -ALEQSVEHGIIDPRVLLKTKGMDQIDMFALISYIQESKLAYKIESYAAHVDELEEASKG 499
Query: 393 IKEATDTESELPHLSGMSVITLEGLFSSLTYFFSR----NGSHVSDYQLALQKYIKRDSK 448
K+ T L +LS ++ L L + FF + GS D +
Sbjct: 500 QKKTIRTSPVLHNLSSF-LLALTNLSTEGRIFFEKVVVDGGSKQYDIK------------ 546
Query: 449 NPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFG----TCL 504
LS L+P F +A + ++IL GT+SP + + L T L
Sbjct: 547 ---------LSYMLLSPTYAFSSIATSARAVILAGGTMSPFQDYETHLFPSHPQHKITKL 597
Query: 505 EAPHVI--------------------DVDL---------------QVLTSVI---STGPD 526
HVI + DL Q+ T+++ S PD
Sbjct: 598 SCGHVIPSSNLCVWTLASMRPATPAGNSDLFEFSFQKRRDKTMIQQLGTAILNICSAVPD 657
Query: 527 N----YPLNASYKTADGYKLMEKLCNRWRETGQ------WSRLNAKKPLFVEPKGGSQED 576
+P SY D +++ L + TG W +L ++K +F E KGGS +
Sbjct: 658 GVVVFFP---SYGYLD--EVVAALQQKLAATGTAPNSSIWDKLQSRKAVFRETKGGSSDQ 712
Query: 577 FEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVV 636
VL+ Y N+I G K A +++ + G L+ + + + + L C ++V
Sbjct: 713 ---VLEDYSNAI-LGEKDAEGKQRSPSQNGALLLSVVGGKMSEGINFSDRLGRC--VVIV 766
Query: 637 GIPFPNINDIQVSLKKKYNDTYRSSKNLLSGN---------------------------- 668
G+P+PN+ + + +Y D+ + L N
Sbjct: 767 GLPYPNVASPEWKARMEYIDSSTVAGLLDKQNGTTAGDVSARESTPSATVTKPPSTITRE 826
Query: 669 -----------EWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLR 717
++Y N RA+NQ+IGR IRHR DY AI+LLD RF ER RA + W+R
Sbjct: 827 QAAAAGKQAARDFYENACMRAVNQSIGRAIRHRGDYAAIVLLDRRFGTERIRAKLPGWIR 886
Query: 718 KSIKQYDSFDAS-----LEGLKSFFRDVKGWV 744
++ S + + + L FFR+ K V
Sbjct: 887 CAMAPIGSNEKTGLPGLMGTLNKFFREKKASV 918
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ + P+ PY QL FM V L R + G +LESPTGTGKSLSL+C+ L W
Sbjct: 5 IEAVDFNHPFTPYDVQLDFMKTVYGVLQRGE--GQV-GILESPTGTGKSLSLICACLTWL 61
Query: 80 QNCKLK 85
++ K K
Sbjct: 62 RHYKKK 67
>gi|380495771|emb|CCF32142.1| DNA repair helicase [Colletotrichum higginsianum]
Length = 896
Score = 140 bits (354), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 172/726 (23%), Positives = 287/726 (39%), Gaps = 176/726 (24%)
Query: 146 IFYASRTHSQISQVISEYKKTAY--RVPMAV-------------------LASRKHYCTN 184
I+Y SRTHSQ++Q I E ++ + +P ++ L+SR+ C N
Sbjct: 207 IYYTSRTHSQLTQFIHELRRPEFPSSIPSSIVQGQREDDRRSKEPVKHLPLSSRQKLCIN 266
Query: 185 KYVR---------------DKENIDEECKLLLGDRNLG-CPQFKNVHKVRGHPSLQKGGC 228
V K ++C L + N+ QF++ H +L
Sbjct: 267 PSVARLGSLSAINDRCSELQKPKAKDKCPYTLKEDNITQTHQFRDT----AHATLP---- 318
Query: 229 HEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILI 288
DIEDL ++G+ + C YYA+R+ A++V PY ++ R A+ + ++G I+I
Sbjct: 319 ----DIEDLYHLGKKLSVCPYYASRAAIAGAEIVTLPYPLLLQKNARDALGIKLEGNIVI 374
Query: 289 LDEAHNIEDIARDAGSVDIDEDVLLKLQMEL--------EQVCSVNPMIYQPLIEMTQDL 340
+DEAHNI D + + ++ L + + L +++ N ++ + + + L
Sbjct: 375 VDEAHNIMDAVANVYASEVKLSELRRARQMLGVYVKRFGKKLKGENRVMVGQVGRVIEGL 434
Query: 341 VGWIE---RRKATLAKREFQHFFSCWTGDKA--LRELQEANISRQCFPI------LLECA 389
W++ + K+ + + C D+ R +Q S+ + I + E A
Sbjct: 435 SEWMDAQSKLKSPQGIVDSKVLLRCKGVDQINLFRLIQYIQESKLAYKIESYVAHVEEEA 494
Query: 390 TKAIKEATDTESELPHLSGMS--VITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDS 447
A S P L +S +I+L L S F+ + + D QL
Sbjct: 495 ADASHGKGPPRSSTPVLHILSSFLISLTNLSSEGRIFYEKLATSPPDIQL---------- 544
Query: 448 KNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFG----TC 503
S L+P F +A + ++IL GT+SP + + S L T
Sbjct: 545 -----------SYLLLSPTHAFSSIATSARAVILAGGTMSPFDDYKSHLFPYLPESKLTT 593
Query: 504 LEAPHVIDVDLQVLTSVISTGPD-----NYPLNASYK---------------------TA 537
L HVI + ++ + P N S++
Sbjct: 594 LSCGHVIPPSNLCVWTLAGSQPGLKRDPNSTFEFSFQRRGDMDMKGSLGLAIFNLCNVVP 653
Query: 538 DG-------YKLMEKLCNRWR------------ETGQWSRLNAKKPLFVEPKGGSQEDFE 578
DG Y +E++ W+ T W RL +K + E +GGS ++
Sbjct: 654 DGVVVFFPSYGYLEEVVTAWKGVATRQGQTPQGATSLWDRLQQRKEVLSETRGGSSDE-- 711
Query: 579 IVLKHYYNSI---SQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIV 635
VL+ Y +I + K K R G L+ + + + + L C I+
Sbjct: 712 -VLESYSRAILGDGREPKPGAAGKPR----GALLLSVVGGKMSEGINFSDRLGRC--VII 764
Query: 636 VGIPFPNINDIQVSLKKKYNDTY--------RSSKNLLSGNE-----------WYCNQAF 676
VG+P+PNIN + K +Y +T S +S +E +Y N
Sbjct: 765 VGLPYPNINSPEWKAKTEYIETTTVQRLTTDSSGTTKMSRDEALAVAKQAARDFYENACM 824
Query: 677 RALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLE----G 732
RA+NQ+IGR IRH+ DY AI+L+D RF +R R + W+R + DS + L
Sbjct: 825 RAVNQSIGRAIRHQGDYAAIVLVDRRFGTDRIRGKLPGWIRGGLDG-DSHEKGLPQLMGA 883
Query: 733 LKSFFR 738
L SFFR
Sbjct: 884 LGSFFR 889
Score = 56.2 bits (134), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 23 IQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNC 82
I PY PY Q FM L R +G +LESPTGTGKSLSL+C++L W +N
Sbjct: 17 IDFNHPYTPYDVQTDFMKTAYGVLQRG--NGQV-GILESPTGTGKSLSLICASLTWLRNQ 73
Query: 83 KLKNQLANI 91
+++ A++
Sbjct: 74 RVEEHEASL 82
>gi|50556538|ref|XP_505677.1| YALI0F20746p [Yarrowia lipolytica]
gi|49651547|emb|CAG78486.1| YALI0F20746p [Yarrowia lipolytica CLIB122]
Length = 785
Score = 140 bits (354), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 194/898 (21%), Positives = 340/898 (37%), Gaps = 251/898 (27%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+++ + V +PY + Y Q +MC + TLD G+C +LE P+GTGK++SLL T+
Sbjct: 3 FYIDDLPVLWPYPRIYPEQYAYMCDIKKTLDVG---GNC--ILEMPSGTGKTVSLLSLTV 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNK 136
A+QQ+ PE + T + + K
Sbjct: 58 AYQQH------------------------------YPEHRKIIYCSRTMSEIEKALAELK 87
Query: 137 NVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKEN---I 193
N+ K T T+ + +++ L SRK+ C N VR ++ +
Sbjct: 88 NLMKFRTETLGFE-----------EDFRGLG-------LTSRKNLCLNPNVRYEKKGYIV 129
Query: 194 DEEC----------KLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQV 243
DE+C KL G+ C +N++ + H + G V ED++ G+
Sbjct: 130 DEKCRAMTSGIAKQKLAAGEDVTLCEYHENMNDIEPHNYIPPG----VFTFEDILAYGEE 185
Query: 244 VRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDA 302
+ C Y+ R M ++ Y Y+++P I + ++ K I+I DEAHNI+++ +A
Sbjct: 186 HKTCPYFTVRRMMAFCNVIIYSYHYLLDPKIADRVSKELSKDCIVIFDEAHNIDNVCIEA 245
Query: 303 GSVDIDEDVLL----------------------KLQMELEQVCS---------------V 325
SVDI ED L KL+ E ++
Sbjct: 246 LSVDITEDSLKRATRGANHLAKKVSEARSSDSEKLKNEYNKLVDGLRDLESGEQEDTFLA 305
Query: 326 NPMIYQPL--------IEMTQDLVGWIERRKATLAKR-EFQHFFSCWTGD--KALRELQE 374
NP++ + L I + V +++R L R + H S K LR+L
Sbjct: 306 NPVLPEDLISEAVPGNIRKAEHFVAFLKRFIEYLKSRMKVLHVISETPASFLKHLRDL-- 363
Query: 375 ANISRQCFPILLECATKAIKEATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSD 434
I R+ E + ++ EL H+ + + +F++L ++ +
Sbjct: 364 TYIERKPLRFCAERLSYLVRTL-----ELTHVDDYTALKEIAVFATLV------STYDTG 412
Query: 435 YQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSS 494
+QL L+ + + P L L CL+ ++ K V + SII+TSGT+SP++ +
Sbjct: 413 FQLILEPFETDQATVPNP----ILHLTCLDASIAIKPVFDRFSSIIITSGTISPLDMYPK 468
Query: 495 ELGVQFGTCLEAPHVIDVDLQVLTSVIST-GPDNYPLNASYK------------------ 535
L F T ++ + + + + +I T G D +++ ++
Sbjct: 469 MLN--FETVVQESYTMTLARRAFCPLIVTKGSDQVAISSRFEIRNDPSVVRNYGNLLIEF 526
Query: 536 ---TADG-------YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYY 585
T DG Y ME + + W+ G + K + VE + + L+ Y
Sbjct: 527 SKITPDGLVVFFPSYLYMESIISMWQTMGILDEVWKYKLILVETPDAQET--SLALETYR 584
Query: 586 NSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPN--- 642
+ S G +GA L V RGK+ GI F +
Sbjct: 585 TACSNG------------------------------RGAVMLCVARGKVSEGIDFDHQFG 614
Query: 643 INDIQVSLKKKYNDTYRSSKNL--------LSGNEWYCNQAFRALNQAIGRCIRHRFDYG 694
+ + + +Y ++ L + N++ A R Q +GR +R + DYG
Sbjct: 615 RTVLMIGVPFQYTESRILKARLEFLRDNYHIRENDFLSFDAMRHAAQCLGRVLRGKDDYG 674
Query: 695 AIILLDERFQEERNRAHISKWLRKSIKQYD---SFDASLEGLKSFFRDVKGWVGKKMFNG 751
++L D RF ++RN+ + KW+ ++I D S D +L K F R +
Sbjct: 675 VMVLADRRFAKKRNQ--LPKWINQAILDADTNLSTDMALAAAKKFLRTM----------- 721
Query: 752 LENSDNDVDHVSSMDQCKEVTKQNTQELNKSDHSGQNVQSISKYDPFSHQKSQGNFEV 809
Q +NK D G +V S+ + + K G + +
Sbjct: 722 ------------------------AQPMNKEDQEGVSVWSLEQLQEYQGSKKDGGYRL 755
>gi|440487319|gb|ELQ67113.1| DEAD_2 domain-containing protein [Magnaporthe oryzae P131]
Length = 1493
Score = 140 bits (353), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 180/752 (23%), Positives = 299/752 (39%), Gaps = 190/752 (25%)
Query: 146 IFYASRTHSQISQVISEYKK-------------------TAYR--VPMAVLASRKHYCTN 184
IFY SRTHSQ++Q ISE ++ T R V L+SR+ C N
Sbjct: 776 IFYTSRTHSQLTQFISELRRPNFPSSFPGADEPSLSKTETGTRECVKHVPLSSRQKLCIN 835
Query: 185 KYVR---DKENIDEECKLLLGDRNLG----CPQFKNVHKVRGHPSLQKGGCHEVHDIEDL 237
V I++ C L + CP + + + + DIED
Sbjct: 836 PAVARLGSVAAINDRCTELQKSKAKSEGKRCPYVPSQDNLSETHQFRDASLATIPDIEDA 895
Query: 238 VNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIED 297
+G+ ++ C YYA R+ A++V PY ++ R A+ ++++G+++++DEAHNI D
Sbjct: 896 HKLGKSLQVCPYYATRTAIPGAEIVTLPYPLLLQKSARDALGIELQGSVVVVDEAHNIMD 955
Query: 298 IARDAGSVDIDEDVLLKLQMEL--------EQVCSVNPMIYQPLIEMTQDLVGWIERRKA 349
S +I + L + + L +++ + N ++ + + Q L W+ER
Sbjct: 956 AIAGVHSAEIRLEDLRRGREMLSIYAKRFGKKLKAENRIMVGQVARVIQGLSEWLER--- 1012
Query: 350 TLAKREFQHFF---SCWTGDKALRE---------LQEANISRQCFPIL-----LECATKA 392
++ +H K + + +QE+ ++ + LE A+K
Sbjct: 1013 -ALEQSVEHGIIDPRVLLKTKGMDQIDMFALISYIQESKLAYKIESYAAHVDELEEASKG 1071
Query: 393 IKEATDTESELPHLSGMSVITLEGLFSSLTYFFSR----NGSHVSDYQLALQKYIKRDSK 448
K+ T L +LS ++ L L + FF + GS D +
Sbjct: 1072 QKKTIRTSPVLHNLSSF-LLALTNLSTEGRIFFEKVVVDGGSKQYDIK------------ 1118
Query: 449 NPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFG----TCL 504
LS L+P F +A + ++IL GT+SP + + L T L
Sbjct: 1119 ---------LSYMLLSPTYAFSSIATSARAVILAGGTMSPFQDYETHLFPSHPQHKITKL 1169
Query: 505 EAPHVI--------------------DVDL---------------QVLTSVI---STGPD 526
HVI + DL Q+ T+++ S PD
Sbjct: 1170 SCGHVIPSSNLCVWTLASMRPATPAGNSDLFEFSFQKRRDKTMIQQLGTAILNICSAVPD 1229
Query: 527 N----YPLNASYKTADGYKLMEKLCNRWRETGQ------WSRLNAKKPLFVEPKGGSQED 576
+P SY D +++ L + TG W +L ++K +F E KGGS +
Sbjct: 1230 GVVVFFP---SYGYLD--EVVAALQQKLAATGTAPNSSIWDKLQSRKAVFRETKGGSSDQ 1284
Query: 577 FEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVV 636
VL+ Y N+I G K A +++ + G L+ + + + + L C ++V
Sbjct: 1285 ---VLEDYSNAI-LGEKDAEGKQRSPSQNGALLLSVVGGKMSEGINFSDRLGRC--VVIV 1338
Query: 637 GIPFPNINDIQVSLKKKYNDTYRSSKNLLSGN---------------------------- 668
G+P+PN+ + + +Y D+ + L N
Sbjct: 1339 GLPYPNVASPEWKARMEYIDSSTVAGLLDKQNGTTAGDVSARESTPSATVTKPPSTITRE 1398
Query: 669 -----------EWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLR 717
++Y N RA+NQ+IGR IRHR DY AI+LLD RF ER RA + W+R
Sbjct: 1399 QAAAAGKQAARDFYENACMRAVNQSIGRAIRHRGDYAAIVLLDRRFGTERIRAKLPGWIR 1458
Query: 718 KSIKQYDSFDAS-LEGLKS----FFRDVKGWV 744
++ S + + L GL FFR+ K V
Sbjct: 1459 CAMAPIGSNEKTGLPGLMGTLNKFFREKKASV 1490
>gi|123437769|ref|XP_001309677.1| helicase [Trichomonas vaginalis G3]
gi|121891414|gb|EAX96747.1| helicase, putative [Trichomonas vaginalis G3]
Length = 859
Score = 140 bits (353), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 102/331 (30%), Positives = 158/331 (47%), Gaps = 40/331 (12%)
Query: 456 HTLSLWCLNPAVVFKDVAE-LSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDL 514
T+S+ C +P++ K VA+ L ++ILTSGTLSP++S EL +F LE H++ D
Sbjct: 361 RTISIICFSPSIAMKKVADFLPKTMILTSGTLSPLSSLEDELEYKFPIKLECNHIVSPD- 419
Query: 515 QVLTSVISTGPDNYPLNASYKTADGYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQ 574
L ++ ++G N +Y+ G +E +++ +F G+
Sbjct: 420 NFLVAIANSGISGQRFNFTYQNRRGNNRLES-----------ELVDSVTDVFKVSPSGAL 468
Query: 575 EDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANK---KGASFLAVCR 631
F Y + +S+ R KR+ E + + EN + KGA+ LAVCR
Sbjct: 469 LFFPSF--SYMDEVSRSISSNASRVKRIYIEAKDAVKQATVLENYKRDAMKGAALLAVCR 526
Query: 632 GKI---------------VVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAF 676
G+ VVGIP+P D V LK+++ + + K L +WY A
Sbjct: 527 GRSSEGLDFVDDFARFVGVVGIPYPTFTDYTVELKREWLENKKPGKGL----KWYTECAV 582
Query: 677 RALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSF 736
RA+NQ+IGR IRH DY AI+L DERF +++ +SKW+++SI YD + + F
Sbjct: 583 RAVNQSIGRAIRHIDDYAAIVLFDERFTGLKDQ--LSKWMQQSIYVYDDWSTLTTEIDQF 640
Query: 737 FRDVK-GWVGKKMFNGLENSDNDVDHVSSMD 766
FR K G++ K+ S V S D
Sbjct: 641 FRAKKEGFLMKRKGRSATQSQRTVTFSQSAD 671
Score = 84.0 bits (206), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 84/165 (50%), Gaps = 9/165 (5%)
Query: 146 IFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKEN--IDEECKLLLGD 203
I Y+SRTHSQ+S VI E KKT ++ +A +ASRK C N + +N I C L
Sbjct: 45 IVYSSRTHSQLSNVIEELKKTRFKPRVAHIASRKMLCINHTINKYDNFLITRLCHNLRSK 104
Query: 204 RNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVF 263
+ CP + + + + C DIE+ + C Y+AA+ ++ A L+
Sbjct: 105 KQ--CP-YGIDENLMSNSNEVLTAC---SDIEEYIENCANHMICPYFAAQINSEQADLIL 158
Query: 264 CPYSYIINPVIRGAM-EVDIKGAILILDEAHNIEDIARDAGSVDI 307
PY+YI++P +R + + G +LI DEAHN D +A S I
Sbjct: 159 TPYTYIVDPNVRQFLPSTTLVGNVLIFDEAHNFADTCSEAYSAKI 203
Score = 51.6 bits (122), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 32/49 (65%)
Query: 57 ALLESPTGTGKSLSLLCSTLAWQQNCKLKNQLANISHSKPDTEAVTDPL 105
ALLESPTGTGK+LSLLCSTLAW++ + Q+ S + V + L
Sbjct: 14 ALLESPTGTGKTLSLLCSTLAWKEQTHYRCQIVYSSRTHSQLSNVIEEL 62
>gi|449018745|dbj|BAM82147.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain
10D]
Length = 1142
Score = 140 bits (352), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 99/335 (29%), Positives = 145/335 (43%), Gaps = 85/335 (25%)
Query: 441 KYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQF 500
KY+ + ++ + +TLS WCL P + + + +++LTSGTLSP+ S +SE+G F
Sbjct: 594 KYVHQSAREHRSSTGYTLSFWCLWPGLALRRATSNAHAVLLTSGTLSPLESVASEMGASF 653
Query: 501 GTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTAD---------------------- 538
L+ HV+D QV +++ GP + LN+SY
Sbjct: 654 PVRLQNSHVVDPATQVFAGILTKGPRDIQLNSSYANRHNREYISDLGSALVNIARVSPRG 713
Query: 539 ------GYKLMEKLCNRWRETGQ---------------------WSRLNAKKPLFVEPKG 571
Y L+ + W +TG W RLNA K +F+EP+
Sbjct: 714 MLVFFPSYVLLARFVEIW-QTGAFHHNNPLNPAHRGRQPTQATVWDRLNAVKRIFMEPRD 772
Query: 572 GSQEDFEIVLKHYYNSISQGSKC---AVVRKKRVKREGNNDLNTIESQENANKKGASFLA 628
+ Y IS G AV R + T E + A+ G
Sbjct: 773 ADAS--RQTVDAYRQWISSGRDACLFAVCRGR-----------TGEGIDFADDFG----- 814
Query: 629 VCRGKIVVGIPFPNINDIQVSLKKKYNDT----YRSSKNLLSGNEWYCNQAFRALNQAIG 684
R I+VG+PFP+ D ++ LK+ Y + R ++G WY Q RA NQA+G
Sbjct: 815 --RTVILVGLPFPSTTDPRIILKRDYLERQALHLRDHGKTITGRLWYVQQCLRAANQAMG 872
Query: 685 RCIRHRFDYGAIILLDERFQEERNRAHIS---KWL 716
R IRH D+GAI+L DERF RAH+ +WL
Sbjct: 873 RVIRHAQDFGAILLCDERF-----RAHLRDLPRWL 902
Score = 136 bits (343), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 102/323 (31%), Positives = 152/323 (47%), Gaps = 40/323 (12%)
Query: 14 PLNAYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLC 73
P + + VEFP++PY Q+ +M VI L Q +ALLESPTGTGK+L LLC
Sbjct: 8 PGRTLFIRQVPVEFPFEPYPCQVRYMEHVIEALQTGQ-----NALLESPTGTGKTLGLLC 62
Query: 74 STLAWQQ-----------NCKLKNQLANISHSKPDTEAVTDPLANGGGFI--PESQPSTI 120
+ LAW+ ++ LA+ S E + + G + PE+ +
Sbjct: 63 AALAWRSLLVAQVQGQASTQRISKSLADDSPKNDYGERLLQGVQGAAGAVVAPEASLRGL 122
Query: 121 PPSTNGQTAQVAMNNKNVKKKMTPTIFYASRTHSQISQVISEYKKTAY--RVPMAVLASR 178
P+ + + ++V P I Y +RTHSQI Q + E +TAY V VL SR
Sbjct: 123 VPAASSENGPGPTPLQSV-----PRIIYLTRTHSQIKQAVRELSRTAYGASVRTVVLGSR 177
Query: 179 KHYCTNKYVRDKENIDEE---CKLLLGDRN----LGCPQ-FKNVH------KVRGHPSLQ 224
+H C + V EN + C L +R L Q FK V V +L
Sbjct: 178 QHLCVHPVVSRLENATMQNVRCTQLTKERRCSFYLNAEQKFKEVGDDFFFIAVDSTSTLA 237
Query: 225 KGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKG 284
G D+EDL G C Y+ +R + +A+++F PY+Y+ + R ++ + ++G
Sbjct: 238 LPG-RRPRDLEDLAAYGHQHAMCPYFLSREASAEAEIIFMPYNYLFDGKCRRSLGLSVEG 296
Query: 285 AILILDEAHNIEDIARDAGSVDI 307
I+I DEAHN+E I D+ S D
Sbjct: 297 DIIIGDEAHNLESICCDSLSFDF 319
>gi|258566511|ref|XP_002584000.1| hypothetical protein UREG_06967 [Uncinocarpus reesii 1704]
gi|237907701|gb|EEP82102.1| hypothetical protein UREG_06967 [Uncinocarpus reesii 1704]
Length = 593
Score = 139 bits (350), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 146/568 (25%), Positives = 247/568 (43%), Gaps = 127/568 (22%)
Query: 230 EVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILIL 289
+V DIED+ +G+ + C YYA RS+ +++V PY ++ R A+++ +K ++I+
Sbjct: 56 KVQDIEDIGKIGERMGICPYYATRSVIGHSEIVTLPYPLLLQKSAREALDISLKDHVIII 115
Query: 290 DEAHNIEDIARDAGSVDIDEDVLLKLQMELEQVCSV-----------NPMIYQPLIEMTQ 338
DEAHN+ D+ + SV I L +LQ LEQV N + ++ +
Sbjct: 116 DEAHNLMDVIANIHSVTIS---LKQLQTALEQVTVYAKKYKTRLKGKNRVYIAQVMRLIA 172
Query: 339 DLVGWIERRKATLAKREFQHFFSCWTGDKAL---------RELQEANISRQCFPILLECA 389
++ ++E AT + S K + R LQE+ ++R+ L +
Sbjct: 173 SILKYLESNVATKGLMDGTVEPSQLMSGKGIDQINPHKLSRYLQESKLARKIDGYLEK-- 230
Query: 390 TKAIKEATDTE-SELPHLSGMS--VITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRD 446
+K+++E + + + +P L + +++L + FF GS + L KY+
Sbjct: 231 SKSLEEKVNGQRTAVPVLFQIQSFLLSLMNPAAEGRLFFENTGSDI------LLKYM--- 281
Query: 447 SKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFS----SELGVQFGT 502
L+P F++V E + ++IL GT+SPM +S S L +
Sbjct: 282 ---------------LLDPTEHFREVVEEARAVILAGGTMSPMTDYSDHLFSYLPPEKLR 326
Query: 503 CLEAPHVIDVDLQVLTSVISTGPDNYPLNASYK---------------------TADG-- 539
HVI + + IS G N + +++ DG
Sbjct: 327 TFSYGHVIPTE-NLTARPISRGIGNTEFDFTFEKRKSSDMMLDLGQTIVEMCKVIPDGVV 385
Query: 540 -----YKLMEKLCNRWR-----ETGQ--WSRLNAKKPLFVEPKGGSQED---FEIVLKHY 584
YK ++++ W+ TG + KPL E SQE+ E +L+ Y
Sbjct: 386 AFFPSYKFLQQVLEAWKYFPSGSTGPKIIETIGLLKPLLYE----SQEENTNIEELLRKY 441
Query: 585 YNSISQGSKCAVVRKKRVK-REGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNI 643
N I +G ++ K EG N +++ G RG IV+G+PFPN+
Sbjct: 442 TNLIDEGKGALLLSVMGGKLSEGIN---------FSDRLG-------RGVIVIGLPFPNV 485
Query: 644 NDIQVSLKKKY--NDTY---------RSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFD 692
Q K KY + Y R S+ L+ E+Y N R +NQ IGR IRH+ D
Sbjct: 486 RSAQWEAKMKYVEHRAYEKAAGPEGSRRSQAKLASREFYENACMRVVNQCIGRAIRHQQD 545
Query: 693 YGAIILLDERFQEERNRAHISKWLRKSI 720
Y AI +LD R++ +R ++ + W+R+S+
Sbjct: 546 YAAIFMLDRRYETQRIQSKLPLWIRQSL 573
>gi|426195896|gb|EKV45825.1| histidine phosphotransfer protein [Agaricus bisporus var. bisporus
H97]
Length = 863
Score = 139 bits (350), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 169/697 (24%), Positives = 275/697 (39%), Gaps = 146/697 (20%)
Query: 146 IFYASRTHSQISQVISEYKKTAYRVPMAV-----------------------------LA 176
I+YASRTHSQ+SQV+ E +K ++V L
Sbjct: 204 IYYASRTHSQLSQVLPELRKIKLSQAVSVIDLHPSSVPQKRGADVLHDVDSTTTRVVALG 263
Query: 177 SRKHYCTNKYVRDK-ENIDEECKLLLGDR-NLGCPQFKNVHKVRGHPSLQKGGCHEVHDI 234
SRK C N +R K ++DE C+ LL ++ + CP + + DI
Sbjct: 264 SRKQLCINDELRSKARDLDEACRELLSEKGDQRCPYLPPPGEDIKIIDFRDQILAAPKDI 323
Query: 235 EDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHN 294
EDL VG++ C Y+ +R A+LV PY+ ++ R A+ +D++ I+++DEAHN
Sbjct: 324 EDLAEVGRMADTCPYFGSRHAIPQAELVTLPYNLLLQKSAREALGIDLRDQIVVIDEAHN 383
Query: 295 IEDIARDAGSVDIDEDVLLKLQMELEQVCSVNPMIYQPL----IEMTQDLVGWIERRKAT 350
+ + + + L + L QVC+ L + + LV +++ K T
Sbjct: 384 LIPTLLSLSTTHLPYHI---LDVSLRQVCAYLSKFRMRLSARNLVHLKRLVVFLDALKKT 440
Query: 351 LAKREFQHFFSCWTGDKALRELQEANIS-------RQCFPI-LLECA--------TKAIK 394
L + + + + ++ L+ ++ R+ I LLE + I
Sbjct: 441 LIQWKEKQCNDLSSTSRSAERLEVLTLAELLDQMGRKAAGINLLEIGQYLKESKIARKIS 500
Query: 395 EATDTESELPHLSGMS-----VITLEGLFSSLTYFFSRNGSHVSDYQLAL-------QKY 442
D E++ SG + +E SLT N + LAL Q
Sbjct: 501 GYADKETDKESGSGAKGQIPPLHVVEDFMVSLT-----NTNDDGRVTLALFGKQGQEQVE 555
Query: 443 IKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGT 502
IK NP N+ DV + + S+IL GT+SPM+ S+L F
Sbjct: 556 IKYQLLNPAPNFM---------------DVVDEARSVILAGGTMSPMSDVVSQL---FSH 597
Query: 503 CLE------APHVI-DVDLQVLTSVISTGPDNYPLN-ASYKTAD---------------- 538
LE HVI + +LQ L V++ P L + K D
Sbjct: 598 ALERIRTFSCGHVIPEKNLQAL--VVTKSPRGGSLEYKADKQGDPNVVAELGQILLNFAN 655
Query: 539 -----------GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNS 587
Y ++ + W+ G R +AK+ +F EP G + D E VL Y
Sbjct: 656 VIPAGVVVFFPSYSFLKFAKSVWKAGGTLDRFSAKREVFFEPDGST--DVERVLGEY--- 710
Query: 588 ISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQ 647
A V ++G I ++ + + LA R IV+G+PF N+ +
Sbjct: 711 ------AAAATTPPVNKKGAILFAVIGAKLSEGLNFSDDLA--RAVIVIGLPFANLGSPE 762
Query: 648 VSLKKKYNDTYRSSKNLL-------SGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLD 700
+ + KY + + E Y N ++NQ+IGR IRH+ D+ ++ILLD
Sbjct: 763 LKERLKYVKQLEERRGFKREKGQKDAAAELYENMCMNSVNQSIGRAIRHKGDWASLILLD 822
Query: 701 ERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFF 737
+R+ R + +W+ + D F + L F+
Sbjct: 823 QRYASSAIRMKLPQWIGGRLFIPDGFGQVMRQLGQFY 859
>gi|238881932|gb|EEQ45570.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 841
Score = 139 bits (350), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 164/648 (25%), Positives = 276/648 (42%), Gaps = 109/648 (16%)
Query: 146 IFYASRTHSQISQVISEYKKTAY---------RVPMAVLASRKHYCTNKYVRDKEN---I 193
IF++SRTHSQ++Q S+ + T + R L SRK C N+ VR KEN +
Sbjct: 203 IFFSSRTHSQLNQFSSQLRLTNFQASFEDLEERTKYIPLGSRKQLCINEKVRSKENDQSV 262
Query: 194 DEECKLLLGDRNLGCPQF-KNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAA 252
++ C L + N GC KN ++ DIEDL +G + C YY+
Sbjct: 263 NDACLDLQRETN-GCQYLPKNYMMSSVTKEFADLSLAKIRDIEDLNELGIELNICPYYSV 321
Query: 253 RSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVL 312
R + +++ PY I R + +DIK +I+I+DEAHNI D+ S+ I D L
Sbjct: 322 RKGIEMTEIISLPYQMIFQDTTRKILNLDIKDSIIIIDEAHNIIDVITSMYSIKITSDQL 381
Query: 313 ------LKLQME--LEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLA---KREFQHFFS 361
LK+ + L+++ S N + LI++ Q L+ ++ + + + Q F
Sbjct: 382 NKVIKSLKIYLNKFLKRLNSGNRINLMKLIKICQILLKFLNTNSEKVKSGDEVQIQDIFK 441
Query: 362 CWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMS----------- 410
TGD + +++ +E + + TDT + ++
Sbjct: 442 DSTGDLVNIHKLDQFLTKSKIAHKIESYIEKTEMETDTGEKKGRITNSGGSSRSSSSNPL 501
Query: 411 VITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFK 470
+ T+ +LT S+ G D + N T +L+ L+P+ VFK
Sbjct: 502 LFTIIKFLRTLTN-LSKEGKFFWDNE----------------NGTISLNYMLLDPSAVFK 544
Query: 471 DVAELSLSIILTSGTLSPMNSFSSELGVQFGT----CLEAPHVI-DVDLQVLTSVISTGP 525
++ + + ++L GT+ PM+ + L T HVI +LQV IS
Sbjct: 545 EIVDQAKCVLLCGGTMEPMSDYMDYLFPSVPTNKINTFACGHVIPKENLQVFP--ISQWN 602
Query: 526 DN--------------------YPLNASYKTADG-------YKLMEKLCNRWRETGQWSR 558
D + + + + G YK ++++ WR+T +
Sbjct: 603 DTNFEFSFQKRNDSKQLMALGEFLIEITKRVPYGVVIFFPSYKYLDQVLQFWRDTKILTS 662
Query: 559 LNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQEN 618
+ ++K +F EPK S + E VL Y I K A++ + + + +
Sbjct: 663 IESEKTIFREPKDPS--NVEKVLNEYGYLIQTERKGAIL------------FSVVGGKMS 708
Query: 619 ANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSGN------EWYC 672
+ LA R I+VG+P+PN ++ K+KY +T S + + +Y
Sbjct: 709 EGINFSDDLA--RAVIMVGLPYPNAYSGEMVTKRKYIETSVLSNGGTTTDAKEKSRNYYE 766
Query: 673 NQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSI 720
N RA+NQ+IGR IRH DY I L+D RF R + +S+W+++ I
Sbjct: 767 NLCMRAVNQSIGRSIRHINDYSIIYLVDRRFSTPRIQNKLSQWVKERI 814
Score = 54.7 bits (130), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 28 PYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCKLKNQ 87
PY PY Q+ M + +T++ +G+ L ESPTGTGK+LS++CS++ W + K N
Sbjct: 13 PYTPYDIQIQLMDAIYNTIE----NGYKIGLFESPTGTGKTLSIICSSMTWLRTFKRNNT 68
Query: 88 LANISHSKPDT 98
++ D
Sbjct: 69 FLETNNEVEDV 79
>gi|241950739|ref|XP_002418092.1| ATP-dependent RNA helicase Chl1, putative [Candida dubliniensis
CD36]
gi|223641431|emb|CAX43392.1| ATP-dependent RNA helicase Chl1, putative [Candida dubliniensis
CD36]
Length = 823
Score = 139 bits (349), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 164/664 (24%), Positives = 280/664 (42%), Gaps = 112/664 (16%)
Query: 146 IFYASRTHSQISQVISEYKKTAY---------RVPMAVLASRKHYCTNKYVRDKEN---I 193
IF++SRTHSQ++Q S+ + T + R L SRK C N VR K N +
Sbjct: 204 IFFSSRTHSQLNQFSSQLRLTNFQASFEDLEERTKYIPLGSRKQLCINDKVRAKGNDQSV 263
Query: 194 DEECKLLLGDRNLGCPQF-KNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAA 252
++ C L + N GC KN ++ DIEDL +G + C YY+
Sbjct: 264 NDACIDLQRETN-GCQYLPKNYMMSNATKEFADLSLAKIRDIEDLNQLGTELNICPYYSV 322
Query: 253 RSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVL 312
R D +++ PY I R + +DIK +I+I+DEAHNI D+ S+ + D L
Sbjct: 323 RKGIDMTEIISLPYQMIFQDTTRKILNLDIKDSIIIIDEAHNIIDVITSMYSIKVTSDQL 382
Query: 313 LK--------LQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLA---KREFQHFFS 361
K L L+++ S N + LI++ Q L+ ++ + ++ + + Q F
Sbjct: 383 NKVIKSLKVYLNKFLKRLNSGNRINLMKLIKICQILLKFLNNNQGSVKSGDEIQIQDIFK 442
Query: 362 CWTGDKA-LRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVITLEGLFSS 420
TGD + +L E +++ +E + I+ T + + ++I ++
Sbjct: 443 DSTGDLVNIHKLDEF-LTKSKIAYKIESYIEKIELETGMKKSSSNPLLFTIIKFLKTLTN 501
Query: 421 LTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSII 480
L S+ G D + N + +L+ L+P+ +FK++ + + ++
Sbjct: 502 L----SKEGKFFWDNE----------------NGSISLNYMLLDPSAIFKEIVDQAKCVL 541
Query: 481 LTSGTLSPMNSFSSELGVQFGT----CLEAPHVIDVDLQVLTSVISTGPDNYPLNASYK- 535
L GT+ PM + L T HVI + + V N+ + +
Sbjct: 542 LCGGTMEPMADYMDYLFPTVPTNKINTFACGHVIPKENLEVFPVSQWNDTNFEFSFQKRN 601
Query: 536 -----TADG--------------------YKLMEKLCNRWRETGQWSRLNAKKPLFVEPK 570
T+ G YK ++++ W+ TG S + + K +F EP
Sbjct: 602 DPKQLTSLGEFLIEITKRVPYGVVIFFPSYKYLDQVLQFWKNTGILSSIESNKTIFREPT 661
Query: 571 GGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVC 630
S + E VL Y I + +R+G + + + + + LA
Sbjct: 662 DPS--NVEKVLSQYGYII------------QTERKGAMLFSVVGGKMSEGINFSDDLA-- 705
Query: 631 RGKIVVGIPFPNINDIQVSLKKKY------------NDTYRSSKNLLSGNEWYCNQAFRA 678
R I+VG+P+PN ++ K+K+ ND SKN +Y N RA
Sbjct: 706 RAVIMVGLPYPNAYSGEMVTKRKFIETSVLKNGGTANDAREKSKN------YYENLCMRA 759
Query: 679 LNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDAS-LEGLKSFF 737
+NQ+IGR IRH DY I L+D RF R + +S+W+++ I + +A +E FF
Sbjct: 760 VNQSIGRSIRHVNDYSIIYLVDRRFSFPRIQNKLSQWVKERISTTTNNNAYIMESTTDFF 819
Query: 738 RDVK 741
++
Sbjct: 820 NIIR 823
Score = 56.6 bits (135), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 4/61 (6%)
Query: 28 PYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCKLKNQ 87
PY PY Q+ M + T++ +G+ L ESPTGTGK+LS++CS++ W +N K N
Sbjct: 13 PYTPYDIQIQLMDAIYDTIE----NGYKIGLFESPTGTGKTLSIICSSMTWLRNFKRNNT 68
Query: 88 L 88
Sbjct: 69 F 69
>gi|320591639|gb|EFX04078.1| dead domain containing protein [Grosmannia clavigera kw1407]
Length = 911
Score = 138 bits (348), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 158/687 (22%), Positives = 266/687 (38%), Gaps = 126/687 (18%)
Query: 146 IFYASRTHSQISQVISEYKKTAY---------------RVPMAV---------LASRKHY 181
I+YASRTHSQ++Q I+E ++ + V A L+SR+
Sbjct: 254 IYYASRTHSQLTQFIAELRRPTFPSSLPDFSQPDKEIDGVAAAAVDEPIRHIPLSSRQRL 313
Query: 182 CTNKYVRDKEN---IDEECKLLLGDRNL----------GCPQFKNVHKVRGHPSLQKGGC 228
C N V + I++ C L + GCP + +
Sbjct: 314 CINPAVARLGSVGAINDRCAELQKPKKKTKTDDGKKIPGCPFAPSAENRVAERQFRDAAL 373
Query: 229 HEVHDIEDLVNVGQVVRGCSYYAARSMAD---DAQLVFCPYSYIINPVIRGAMEVDIKGA 285
+ DIEDL +G + C YY +R A+ A++V PY +++ R A+ + ++ +
Sbjct: 374 ATLPDIEDLFRLGTELHVCPYYGSRRAAEAGGGAEIVTLPYPLLLHKAAREALGIRLENS 433
Query: 286 ILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQVCSVNPMIYQPLIEMTQDLVGWIE 345
++I+DEAHNI D + + + + L V M+ Q L + Q L W+E
Sbjct: 434 VVIVDEAHNIMDAVAGVHAAALLAVYVRRFGRRLRGDGRV--MVGQ-LGRVIQGLSAWME 490
Query: 346 RRKATLAKREFQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPH 405
+ E + + + + + +E + ++ TE++ +
Sbjct: 491 GGADQINLFELVQYI----------QTSKLAFKVESYGAYVEEEAEKNQKVQKTENDAHN 540
Query: 406 LSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNP 465
V L L S L + +G Y+ + +PG LS L+P
Sbjct: 541 AHNPPV--LHTLVSFLLALTNLSGEGRIFYE-------RLPLVSPGAAPDVKLSYLLLSP 591
Query: 466 AVVFKDVAELSLSIILTSGTLSPMNSFSSEL----GVQFGTCLEAPHVIDVDLQVLTSVI 521
F +A + ++IL GT++P + + L + T L HVI + ++
Sbjct: 592 THAFSSIAASARAVILAGGTMAPFSDYRCHLFPSHAPERITTLSCGHVIPPSNLCVWTLA 651
Query: 522 STGPDNYPLNASYK---------------------TADG-------YKLMEKLCNRWRET 553
P + PL+ S++ DG Y ++++ W+
Sbjct: 652 FISPSSPPLDFSFQKRSLAQTIRDLGAAMLNLCAVVPDGVVVFFPSYGYLDEVVAAWKTA 711
Query: 554 GQ-----WSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNN 608
G W RL A+K +F+E +G + D VL Y +I + K +G
Sbjct: 712 GPGATSLWDRLCARKTVFLETRGAASSD--DVLADYSRAIL---------GEEPKSQGAL 760
Query: 609 DLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLS-- 666
+ + + + A L C ++VG+PFPN + + +Y + N S
Sbjct: 761 LFSVVGGKMSEGINFADRLGRC--VVIVGLPFPNPHAPDWKARMQYIEATARDANSNSSD 818
Query: 667 ---------GNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLR 717
++Y N RA+NQ+IGR IRHR DY AIIL D RF R R + W+R
Sbjct: 819 STSLSPAQQARDFYENACMRAVNQSIGRAIRHRADYAAIILADHRFATPRIRNKLPAWIR 878
Query: 718 KSI---KQYDSFDASLEGLKSFFRDVK 741
+ + A + L FFR K
Sbjct: 879 DGMVAASEDRGLSAMVTTLGGFFRGKK 905
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 28 PYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCKLKNQ 87
PY PY Q+ FM V D G A+LESPTGTGKSLSL+C L W + + Q
Sbjct: 38 PYTPYDVQMDFMRAV---YDACATGGGQVAILESPTGTGKSLSLICGALTWLRQFRRSQQ 94
Query: 88 LANISHS 94
A + S
Sbjct: 95 AAAVQGS 101
>gi|322694417|gb|EFY86247.1| DEAD-2 domain-containing protein [Metarhizium acridum CQMa 102]
Length = 891
Score = 138 bits (348), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 159/693 (22%), Positives = 276/693 (39%), Gaps = 154/693 (22%)
Query: 146 IFYASRTHSQISQVISEYKKTAY-----------------RVPMAVLASRKHYCTNKYVR 188
I+Y SRTHSQ+SQ I+E ++ + V + L+SR+ C N V
Sbjct: 212 IYYTSRTHSQLSQFITELRRPKFPSSLPTSLAEEKSSVQETVKLLPLSSRQRLCINPSVA 271
Query: 189 ---DKENIDEECKLLLGDRNLG-CPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVV 244
+ I++ C L ++ C + + V DIEDL +G+ +
Sbjct: 272 RLGSVQAINDRCAELQQSKSTKKCSYVPKEELLSQTHQFRDSALATVPDIEDLHQLGKSL 331
Query: 245 RGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGS 304
C YYA+RS A+++ PY ++ R A+ + ++G ++I+DEAHN+ D + +
Sbjct: 332 AVCPYYASRSALPGAEIITLPYPLLLQRSAREALGIKLEGNVVIIDEAHNVMDAVANVHA 391
Query: 305 VDIDEDVLLKLQMEL--------EQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREF 356
+I L K + L +++ VN + + + L W+ K +
Sbjct: 392 AEIKLSDLQKGRGMLGVYVKRFGKKLKGVNRVNVGRVGRVIDGLTEWMNGAKGF----KQ 447
Query: 357 QHFF---SCWTGDKALRE---------LQEANISR--QCFPILLECATKAIKEATDTESE 402
QH + T K + + +QE+ ++ + + +E + K AT + +
Sbjct: 448 QHGIVDANDLTRPKGIDQINMFELIQYIQESKLAYKIESYAAHVESENSSGKPATKSSTP 507
Query: 403 LPHLSGMSVITLEGLFSSLT-------YFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWT 455
+ H TL ++LT F+ + V D Q
Sbjct: 508 VLH-------TLVSFLAALTNPSTEGRIFYQKTSGPVQDVQ------------------- 541
Query: 456 HTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFG----TCLEAPHVID 511
LS L+P F + + ++IL GT+SP + + + L T L HVI
Sbjct: 542 --LSYLLLSPTHAFSSIVSSARAVILAGGTMSPFDDYKNHLFPALADAKVTTLSCGHVIP 599
Query: 512 VDLQVLTSVISTGPDNYPLNASYK---------------------TADG-------YKLM 543
+ + ++ T P SY+ DG Y +
Sbjct: 600 RENLCVCTLTGTRPGGSSFEFSYQRRGDQEMVKELGLAILNICSLVPDGVVVFFPSYGYL 659
Query: 544 EKLCNRWR---------ETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSI--SQGS 592
E++ W +T W RL +K +F E KG S ++ VL+ Y +I + G
Sbjct: 660 EEVVAVWSRRALGDKNPQTTIWDRLQTRKMVFRETKGCSSDE---VLQEYTQAILGNGGR 716
Query: 593 KCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKK 652
+V+ K G L+ + + + + L C +VVG+P+PNI + +
Sbjct: 717 TTGMVKGK----GGALLLSVVGGKMSEGINFSDRLGRC--VMVVGLPYPNIASPEWKARM 770
Query: 653 KY---------NDTYRSSKNLLSGNE-----------WYCNQAFRALNQAIGRCIRHRFD 692
+Y D+ + + L+ +E +Y N RA+NQ+IGR IRH+ D
Sbjct: 771 EYIESTTLENLQDSVNVAGSKLTKDEAAARAKQAARDFYENACMRAVNQSIGRAIRHKGD 830
Query: 693 YGAIILLDERFQEERNRAHISKWLRKSIKQYDS 725
Y AI+L D R+ ER + + W+R ++ S
Sbjct: 831 YAAIVLADRRYATERIQGKLPGWIRSGMEARGS 863
Score = 55.1 bits (131), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 39/66 (59%), Gaps = 4/66 (6%)
Query: 19 HVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGT-GKSLSLLCSTLA 77
H+ + PY PY Q FM V LD+ + G +LESPTGT GKSLSL+C++L
Sbjct: 15 HLEKLDFHHPYTPYAVQEQFMRTVYDILDKGE--GQV-GILESPTGTKGKSLSLICASLT 71
Query: 78 WQQNCK 83
W +N K
Sbjct: 72 WLRNFK 77
>gi|294654380|ref|XP_456430.2| DEHA2A02112p [Debaryomyces hansenii CBS767]
gi|218511979|sp|Q6BZD9.2|CHL1_DEBHA RecName: Full=ATP-dependent RNA helicase CHL1; AltName:
Full=Chromosome loss protein 1
gi|199428836|emb|CAG84382.2| DEHA2A02112p [Debaryomyces hansenii CBS767]
Length = 820
Score = 138 bits (348), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 161/674 (23%), Positives = 288/674 (42%), Gaps = 132/674 (19%)
Query: 146 IFYASRTHSQISQVISEYKKTAY---------RVPMAVLASRKHYCTNKYVRDKEN---I 193
IF++SRTHSQ+SQ + T + R+ + LASRK C + + N I
Sbjct: 193 IFFSSRTHSQLSQFSHQLNMTEFESSLDNIPERIKFSPLASRKQLCIHPKISKLSNVSSI 252
Query: 194 DEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGG---CHEVHDIEDLVNVGQVVRGCSYY 250
++ C L C +H + ++K ++HDIEDL +G ++ C YY
Sbjct: 253 NDACIDLQQSSKNSCEYIPKLHNTQSEEIVKKFSDLSFTKIHDIEDLGKLGNKLKICPYY 312
Query: 251 AARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSV----- 305
+ R D +++ PY ++ R A+ ++I +I+I+DEAHN+ D+ SV
Sbjct: 313 SVRKGIDVTEIIALPYQMLLQDSTRSALNLNIDDSIIIIDEAHNLLDVISSIYSVSITSN 372
Query: 306 ---DIDEDVLLKLQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQH---- 358
DI + + L ++++ S N + LI++ Q L +I + + +H
Sbjct: 373 ELSDITKSLKFYLNKFIKRLNSGNRINIMKLIKLCQVLEKFIS---SNSKDGKIKHGDEI 429
Query: 359 ----FFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVITL 414
F TGD NI + +E K A ES + L+ I
Sbjct: 430 ITSDIFEGTTGDL-------VNIHK------IEQFLNKSKIAYKIESYMQKLNDSESI-- 474
Query: 415 EGLFSSLTYFFSRNGSHVSDYQLA-LQKYIKRDSKNPGGNWTHT-----LSLWCLNPAVV 468
+N S+ +++ K + SK W T ++ L+P+ +
Sbjct: 475 ------------KNRSNPLLFKITKFLKCLTNPSKEGKFFWDKTNDSVSINYMLLDPSEI 522
Query: 469 FKDVAELSLSIILTSGTLSPMNSFSSEL-------GVQFGTCLEAPHVI-DVDLQVL--- 517
F+D+ + + ++L GT+ PMN +++ L ++ +C H+I +L+V
Sbjct: 523 FRDIVKRARCVLLCGGTMEPMNDYTNYLFPYIPPEQIKKFSC---GHIIPQENLEVFPIG 579
Query: 518 -----------------TSVISTGPDNYPLNASYKTADG-------YKLMEKLCNRWRET 553
+I G + LN T DG YK + + N WR+
Sbjct: 580 NYNDISFEFSFDKRNNSKMIIELG--HAILNIIESTPDGIVIFFPSYKYLNVVMNVWRQN 637
Query: 554 GQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTI 613
L K +F EP+ S+ E VL Y+S ++ K + + V + + +N
Sbjct: 638 KIIESLTKVKAIFQEPEDSSK--VEKVLND-YSSTNKSEKHSALLLSVVGGKMSEGINFS 694
Query: 614 ESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYNDTYRSSKN------LLSG 667
+ + RG I++G+PFPNI ++ K+K+ + +K +++
Sbjct: 695 DE-------------LARGVIMIGLPFPNIFSAELIAKRKFIEESTIAKGGTKSQAMVNA 741
Query: 668 NEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSI---KQYD 724
+Y N RA+NQ+IGR IRH+ DY I L D+R+ ++ + +S W+++ + +
Sbjct: 742 KNFYENICMRAVNQSIGRSIRHKNDYSIIYLFDQRYGSDKIQDKLSGWVKQKLFTRGRCT 801
Query: 725 SFDASLEGLKSFFR 738
F+ ++ + FFR
Sbjct: 802 DFNQVIKETQDFFR 815
Score = 50.1 bits (118), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 5/56 (8%)
Query: 28 PYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCK 83
P++PY Q+ M + +D + L ESPTGTGK+LSL+CS++ W + K
Sbjct: 19 PFEPYDIQIQLMDAIYDAID-----NYKIGLFESPTGTGKTLSLICSSMTWLREYK 69
>gi|397648208|gb|EJK78040.1| hypothetical protein THAOC_00085 [Thalassiosira oceanica]
Length = 1055
Score = 138 bits (348), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 163/698 (23%), Positives = 283/698 (40%), Gaps = 164/698 (23%)
Query: 146 IFYASRTHSQISQVISEYKKTAY--RVPMAVLASRKHYCTNKYV------------RDKE 191
+ YA+RTHSQ SQ I E K+T + V + L SR C N+ V R +
Sbjct: 371 VIYAARTHSQNSQFIGELKRTHWGKDVKVVALGSRSLLCNNEAVLYSSRTNKKSSRRTES 430
Query: 192 NIDEECKLLLGDRNLGCPQFKNVHKVRGH------------PSLQKGGCHEVH---DIED 236
I E C L + G + + K +G S+ H + DIED
Sbjct: 431 EITEMC-LDMQKSKTGSGKRTSDGKAKGKNTSSKCPHLTSSESISTLALHSLARPTDIED 489
Query: 237 LVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIE 296
+ ++G+ CSYYA+R A++V PY+ +++P R ++ + IKGA++++DEAHN
Sbjct: 490 MASLGKASNCCSYYASREALAAAEVVVVPYNTLLSPQARESVGLSIKGALIVVDEAHNTP 549
Query: 297 DIARDAGSVDIDEDVLLKLQMELEQVCSVNP----------MIYQPLI-EMTQDLVGWIE 345
+ R S + L L+ L+Q+ + N + Y I + ++ +++
Sbjct: 550 ETLRALSSCSLS---LAVLKAALDQLLAYNKKYSGRLAGRNVFYLGQIRRILTTMIRFLK 606
Query: 346 RRKATLAKREFQ-------------------HFFSCWTGDKALRELQEANISRQCFPIL- 385
RR + E Q + FS LR L+++ +S++ +
Sbjct: 607 RRPKSRDGVEPQRKQMLDAVDLIFKLKLDNINLFSI------LRYLEKSRLSQKLLGFMN 660
Query: 386 -LECATKAIKEATDTESEL-PHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYI 443
+ + + + +L H+S MS + E LT SR G ++++
Sbjct: 661 FQTSREEVVSDKNSKDQKLSKHVSSMSFV--ETFLDRLT-GTSREGKVIAEWP------- 710
Query: 444 KRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTC 503
D ++ + T + ++ A ++A+ + +I+L GTL P + ++EL +
Sbjct: 711 --DEEDSCSS-TASFRFVQISSASQLDNIAKEAHAIVLAGGTLRPFSHVAAELFAKDAEV 767
Query: 504 LEAPHVIDVDL---------------------------------QVLTSVISTGPDNYPL 530
+ A + +L VLTS +S GP + L
Sbjct: 768 MVAASKAEAELSDTYDHATNGPPSSVQVTPSLTTFTCGHVIPPSNVLTSCLSIGPSSRKL 827
Query: 531 NASYKTADGYKLMEK-------LCN---------------------RWRETGQWSRLNAK 562
+ + T +++++ LC+ RWR TG ++ K
Sbjct: 828 DFRHATRSTTEMIDELGFSILSLCDAVPNGFVVFLPSYRYESQVFQRWRSTGMLQQIGKK 887
Query: 563 KPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKK 622
K + EPK + D + C K +EG + + + +
Sbjct: 888 KCIHREPKNSREVDDLL--------------CRYSAKASATKEGALLFSVMGGKMSEGIN 933
Query: 623 GASFLAVCRGKIVVGIPFPNINDIQVSLKKKYNDTYRSSKNL-LSGNEWYCNQAFRALNQ 681
A L CR +V G+PFP+I D + K D + + ++G E+Y N R +NQ
Sbjct: 934 FADHL--CRCVLVAGLPFPDITDPILKEKMSSLDKEKRDAGMGITGQEYYQNLCMRTVNQ 991
Query: 682 AIGRCIRHRFDYGAIILLDERFQEERNRAH-ISKWLRK 718
++GR IRH DY AI+L D R+ +R + +WLRK
Sbjct: 992 SVGRAIRHAKDYAAIVLCDFRYASDRRIWRGLPQWLRK 1029
Score = 48.5 bits (114), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 59/127 (46%), Gaps = 30/127 (23%)
Query: 25 VEFPYQ-PYGSQLVFMCRVISTLD--RAQR---------------------DGHCH---- 56
V FPY+ PYG Q M ++ L RA DG+ +
Sbjct: 9 VPFPYESPYGVQRDLMSAILGALRLIRANDSDEQTLHHDLRSVPPAGGVVPDGYEYRAPI 68
Query: 57 ALLESPTGTGKSLSLLCSTLAWQQNCKLK--NQLANISHSKPDTEAVTDPLANGGGFIPE 114
++ESPTGTGKSLSL C+++AW ++ + + +Q+ ++S D +A +A+ P
Sbjct: 69 IMVESPTGTGKSLSLACASMAWLKHYESRDLDQMIRPTNSSEDQQAGVAAMASANAVSPT 128
Query: 115 SQPSTIP 121
+ IP
Sbjct: 129 ASQVDIP 135
>gi|118387755|ref|XP_001026980.1| DNA repair helicase (rad3) [Tetrahymena thermophila]
gi|89308750|gb|EAS06738.1| DNA repair helicase (rad3) [Tetrahymena thermophila SB210]
Length = 1433
Score = 138 bits (347), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/334 (30%), Positives = 148/334 (44%), Gaps = 96/334 (28%)
Query: 457 TLSLWCLNPAVVFKDVA-ELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQ 515
+++LWCL+P+V F+++ E SI+LTSGTL PMNS+ SEL ++F L H+I++
Sbjct: 527 SINLWCLDPSVAFQNILNEGPYSIMLTSGTLHPMNSWESELNIKFDVKLATSHIINIQKS 586
Query: 516 VLTSVISTGPDNYPLNASYKT-ADGYKLME-------KLCN------------------- 548
V+ V+ GP+ +N S+ +G K+ E +LCN
Sbjct: 587 VVGGVVKNGPNKMEMNFSFNNRQNGIKIYEELGQFLIQLCNIVPNGILVCFSSGSLMQLA 646
Query: 549 --RWRET--GQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKR 604
W E+ RLNA K +F EP+ S + +K Y N+ +
Sbjct: 647 RDSWLESQLNIIQRLNAIKDVFFEPR--SNVELSSTMKSYCNAAER-------------- 690
Query: 605 EGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPN---------------INDIQVS 649
+ +GA VCRGKI GI F + D V
Sbjct: 691 ---------------DDRGAIMFCVCRGKISEGIDFTDKLARSVVVVGVPFPPAADTWVV 735
Query: 650 LKKKYNDTYRSSKN------LLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERF 703
K Y D +S +N L+G EWY RALNQAIGR IRH+ DYG++ L D R
Sbjct: 736 TKMDYLDKKQSKENTDIELKTLNGKEWYFLCTVRALNQAIGRVIRHKDDYGSVYLCDNR- 794
Query: 704 QEERNRAHISKWLRKSIKQYDSFDASLEGLKSFF 737
W+R ++K Y +F+ L ++FF
Sbjct: 795 -----------WVRPALKNYSTFEYLLNDCQNFF 817
Score = 84.7 bits (208), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 87/165 (52%), Gaps = 9/165 (5%)
Query: 159 VISEYKKTAYRVPMAVLASRKHYCTNKY---VRDKENIDEECKLLLGDRNLGCPQFKNVH 215
V+ E K TAY+ + ++ SR+ YC K ++D E ++ CK + + C QF N
Sbjct: 117 VMKELKATAYKPKVCIMGSREQYCLKKEYSNLKDLE-LNGSCKDAIKKKT--C-QFYNYS 172
Query: 216 KVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIR 275
G Q EV DIE+L G+ + C YY +R + DDA L+ PYS+++
Sbjct: 173 GDGGKQ--QPKILDEVLDIEELQERGRCKKFCPYYYSREIKDDADLIILPYSFLLKQSRF 230
Query: 276 GAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELE 320
+V +K +I+I DEAHN+ A + S +D++++ + EL+
Sbjct: 231 QEFQVILKDSIIIFDEAHNVPSAAEEGTSYKVDQNLIEESNKELD 275
Score = 57.8 bits (138), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 37/57 (64%), Gaps = 5/57 (8%)
Query: 22 GIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
G+ + FP++PY Q +M ++ L+ +ALL+SPTGTGK+LSLLC+ L W
Sbjct: 50 GVDILFPFKPYQIQEDYMRSIVEALN-----SKSNALLQSPTGTGKTLSLLCACLGW 101
>gi|350631746|gb|EHA20117.1| ATP-dependent DNA helicase-like protein [Aspergillus niger ATCC
1015]
Length = 987
Score = 138 bits (347), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 181/743 (24%), Positives = 293/743 (39%), Gaps = 180/743 (24%)
Query: 79 QQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNV 138
+++ K + +LA+ S P T + + + Q ST P ++ +N V
Sbjct: 144 EEHSKPRGELAHTSELSPSTLELLERF--------KGQISTAKPGSDD------ADNDEV 189
Query: 139 KKKMTPTIFYASRTHSQISQVISEYKKTAY---------------------RVPMAVLAS 177
K IFY SRTHSQ++Q E ++ RV L S
Sbjct: 190 K------IFYCSRTHSQLTQFAGELRRVKMPWSIPKDLLSTDLTGEEELEERVKHVTLGS 243
Query: 178 RKHYCTNKYVRDKEN---IDEECKLLLGDRNLG----CPQFKNVHKVRGHPSLQKGGCHE 230
RK+ C N V EN I+E C L L N+ CP + R +
Sbjct: 244 RKNLCINPRVSSLENATAINERC-LDLQQPNVNPQHRCPFLPSKEDERQVLQFRDHALST 302
Query: 231 VHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILD 290
V DIEDL +G+ + C YYA+RS+ D++ V R A+ + +KG ++I+D
Sbjct: 303 VKDIEDLGKLGKKIGICPYYASRSVVKDSE------------VSREALNLSVKGHVIIID 350
Query: 291 EAHNIEDIARDAGSVDIDEDVLLKLQMELEQVC---------------SVNPMIYQPLIE 335
EAHN+ D + SV + L +LQ L Q+ S + + L
Sbjct: 351 EAHNLMDAISNIHSVTV---TLSQLQTSLSQLTIYGRKFKTRLKGKNRSYVAQVIRLLSS 407
Query: 336 MTQDLVGWIERRKATLAKREFQHFFSCWTGD-----KALRELQEANISRQCFPILLECAT 390
+ L +E KA S D K R LQE+ ++R+ +
Sbjct: 408 IAAHLRSLLESGKAPEGPVLISELMSGKGVDQINPYKLSRYLQESKLARKVDGYVEFTRD 467
Query: 391 KAIKEATD--TESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSK 448
+ K+A+ T L H+ G +++L + F+S+ D QL KY+
Sbjct: 468 PSDKQASRSPTVPVLFHIQGF-LLSLMNPSAEGRLFYSKEQ---GDIQL---KYM----- 515
Query: 449 NPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGT----CL 504
L+P F+++ E + +IIL GT+SPM + + L
Sbjct: 516 -------------LLDPTNQFRELVEDARAIILAGGTMSPMTDYMNHLFSYVPASRLDMF 562
Query: 505 EAPHVIDVDLQVLTSVISTGPDNYPLNASYKTAD-------------------------- 538
HVI + ++ + G + +Y D
Sbjct: 563 SYGHVIPPE-NLIAHTLVRGVQGSEFDFTYDARDSEKMIMDLGRTIATLCHVIPDGVVAF 621
Query: 539 --GYKLMEKLCNRWR-----ETGQ--WSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSIS 589
Y + ++ N W+ E GQ ++ + KKP+ E + + E+ L Y N++
Sbjct: 622 FPSYDYLGRVLNIWKKPMLGEQGQTVYNLIGQKKPILSESRDMTVTTEEL-LHTYANTVD 680
Query: 590 QGSKCAVVRKKRVK-REGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQV 648
G ++ K EG N ++K G RG ++VG+PFPNI
Sbjct: 681 SGRGALLLSVVGGKLSEGIN---------FSDKLG-------RGVLIVGLPFPNIRSAVW 724
Query: 649 SLKKKY-----------NDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAII 697
K +Y ++ R +G ++Y N RA+NQ IGR IRHR DY AI+
Sbjct: 725 QAKIQYIEQKTHQQATGSEASRQLAAKAAGRDFYENSCMRAVNQCIGRAIRHRNDYAAIV 784
Query: 698 LLDERFQEERNRAHISKWLRKSI 720
L+D R+++ +A + W+++S+
Sbjct: 785 LVDRRYEKPGIQAKLPAWIKQSM 807
>gi|406606908|emb|CCH41762.1| chromosome transmission fidelity protein 1 [Wickerhamomyces
ciferrii]
Length = 814
Score = 137 bits (346), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 167/717 (23%), Positives = 299/717 (41%), Gaps = 154/717 (21%)
Query: 112 IPESQPSTIPPSTNGQTAQVAMNNKNVKKK---------MTPTIFYASRTHSQISQVISE 162
I +SQ T+ + ++++ M KN+ K+ + +ASRTHSQ+SQ S+
Sbjct: 163 IEKSQ--TLKEKNDAISSEIQMMLKNINKQDRDDGSNSEKDVKVLFASRTHSQLSQFSSQ 220
Query: 163 YKKTAYRVPMAV-----------LASRKHYCTNKYVRDKENIDEECKLLLGDRNLGCPQF 211
T P ++ L SRK C ++ V ++ L+ + L +
Sbjct: 221 L--TLPHFPSSIVGIEEHLKYLSLGSRKQLCIHEKVSKMSDVS-----LMNEACLDLQKQ 273
Query: 212 KNVHKVRGHPSLQKGGCH------------EVHDIEDLVNVGQVVRGCSYYAARSMADDA 259
++ HK S + +V DIEDL +VG+ + C YY+ R +
Sbjct: 274 ESKHKCEFFSSQKDHDMQNRIIEFRDHIFSKVQDIEDLNSVGKNLGVCPYYSTRKAIPGS 333
Query: 260 QLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIED--IARDAGSVDIDE-------- 309
+++ PY ++ R A+ + IK ++++DEAHN+ D I+ + +V IDE
Sbjct: 334 EVITLPYQLLLQKSSRDALNISIKDCVVVIDEAHNLLDTIISLHSVAVTIDEFSACKKAL 393
Query: 310 -DVLLKLQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKA 368
L K L VN + I++ V ++ K + + F TGD
Sbjct: 394 KRYLGKFSRRLNGGNRVNIIKITKFIDLFLKYVDSCDK-KVPGKEIDLLDVFKGTTGDML 452
Query: 369 -LRELQE-ANISRQCFPILLECATKAIKEATDTESELPHLSGMSVITLEGLFSSLTYFFS 426
+R+L++ +S+ F I ++ E D +S P L VI F + S
Sbjct: 453 NIRKLEKYLTVSKIAFKI------ESYMEKQD-QSSTPTL--FKVIE----FLKAVSYPS 499
Query: 427 RNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTL 486
+ G D + N +L+ L+P+ +FK++ E +IL GT+
Sbjct: 500 KEGKFFFDVK----------------NDVVSLNYMLLDPSQIFKEIVEEVKCVILAGGTM 543
Query: 487 SPM----------------NSFS-------------------SELGVQFGTCLEAPHVID 511
P+ N FS SE FG +++
Sbjct: 544 EPVEDYTNYLFPYLEPSKVNKFSCGHIIPKENLNVFIIDKNKSEFEFSFGK--RQDNLMK 601
Query: 512 VDL-QVLTSVISTGPDNYPLNASYKTADGYKLMEKLCNRWRETGQWSRLNAKKPLFVEPK 570
D + L S++ P + YK + + + W+++ W+ +N K +F+E
Sbjct: 602 EDFGRSLCSLMKNVPAGMVV-----FLPSYKFLADIVSVWKKSNIWNEINFIKKVFMESA 656
Query: 571 GGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVC 630
VL+ Y ++++G +G+ L+ + + + + LA
Sbjct: 657 TTD------VLEDYSLNVAEG-------------KGSLLLSVVGGRLSEGINFSDDLA-- 695
Query: 631 RGKIVVGIPFPNINDIQVSLKKKYNDTYRSSKN------LLSGNEWYCNQAFRALNQAIG 684
R ++VG+PFPN+ ++ +K+Y ++ K + + +Y N RA+NQ++G
Sbjct: 696 RAVVMVGLPFPNVFSDELVSRKRYIESQVLEKTGDKRQAIEATKSFYENICMRAVNQSVG 755
Query: 685 RCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFRDVK 741
R IRHR DY I D+R+ R R+ +S W+++ + + SFD+ L+ SFFR+ K
Sbjct: 756 RSIRHRGDYSTIYFFDKRYHTPRIRSKLSNWIKERVSETSSFDSILKETNSFFREKK 812
Score = 57.8 bits (138), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 34/51 (66%), Gaps = 4/51 (7%)
Query: 28 PYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
PYQPY Q+ FM V TL+ G+ + ESPTGTGK+LSL+CST+ W
Sbjct: 15 PYQPYDIQIDFMNAVNETLN----GGYKIGIFESPTGTGKTLSLICSTVTW 61
>gi|396081915|gb|AFN83529.1| Rad3-like ATP dependent DNA binding helicase [Encephalitozoon
romaleae SJ-2008]
Length = 617
Score = 137 bits (346), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 171/701 (24%), Positives = 280/701 (39%), Gaps = 157/701 (22%)
Query: 52 DGHCHALLESPTGTGKSLSLLCSTLAWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGF 111
DG + SPTGTGK++SLL AV D + G
Sbjct: 22 DGEAVGIFSSPTGTGKTMSLL--------------------------SAVVDYIDVDG-- 53
Query: 112 IPESQPSTIPPSTNGQTAQVAMNNKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVP 171
+ + + + A+ +N T+FY +RTH+Q++Q I+E K+ R
Sbjct: 54 --------VELNHRNRVLEQALFQRN-----GGTVFYCTRTHTQLAQAINELKRLDVRCN 100
Query: 172 MAVLASRKHYCTNKYVRDKENIDEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGG---- 227
VL SRK YC N+ + +N D N GC Q G + GG
Sbjct: 101 AVVLGSRKIYCLNEKILQYKNSDA--------MNEGCKQIVK----EGLCAFYDGGELFD 148
Query: 228 -CHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAI 286
C V D+EDL +G+ R C YYA++ + +VF PY + R ++++D++G+I
Sbjct: 149 GCG-VLDVEDLTLIGKEQRLCPYYASKIYSHQCDIVFLPYQLLFTREGRRSVDIDVRGSI 207
Query: 287 LILDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQVCSVNPMIYQPLIEMTQDLVGWIER 346
+I+DEAHNI D SV +QM + + Y +EM ++ R
Sbjct: 208 VIVDEAHNICD------SV---------IQMNTSTILFMTISKYIKAMEMYKERYSERVR 252
Query: 347 RKATLAK-----REFQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTES 401
R L + R + F G R + E LL+ + + + E
Sbjct: 253 RDGVLERILEVLRRIEAF-----GLMHCRNMNEEEGVMGVSEFLLKTSIEDFN-MLEIED 306
Query: 402 ELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHT---L 458
+ SG+S LEG L S +S ++ + GG +T +
Sbjct: 307 YIAS-SGISR-KLEGFEKDLNLQLSEISKFLSLLTMS----------DKGGRIFYTSKRI 354
Query: 459 SLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVI---DVDLQ 515
L+ + F+DV E S++ GT+ P++ +S LG + +P V
Sbjct: 355 KFTPLDATMYFEDVLECK-SLLFAGGTMEPIDQLASVLGKR------SPQYFSYRSVCRD 407
Query: 516 VLTSVISTGPDNYPLNASYKTADGYKLMEKLC-------NRWRETGQWSRLNAKKPL--- 565
L V+ +GP + +Y+T + + ++ + N R+ G L +K L
Sbjct: 408 FLPIVVGSGPSGREVVVNYETRESTESVKDVASSILNFSNAVRDGGMVCFLPSKAYLKIL 467
Query: 566 ------FVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENA 619
+ K ED ++ + V R+ EG N
Sbjct: 468 REVCGDMIGRKKALYEDLTNFQEYVLEVKKEACILFAVMGGRLS-EGM----------NF 516
Query: 620 NKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRAL 679
N K +CR +VVG+P+P+ D+++ + K+N G + + A R +
Sbjct: 517 NDK------LCRLLMVVGVPYPS-QDLELKERIKHN-----------GRGYTTSIAMRIV 558
Query: 680 NQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSI 720
NQ +GR +RH+ DY ++LLD R+ + IS W+R+ I
Sbjct: 559 NQTLGRALRHKDDYAVLVLLDRRYAQLSK--LISSWIRERI 597
>gi|358370846|dbj|GAA87456.1| DNA repair helicase RAD3 [Aspergillus kawachii IFO 4308]
Length = 801
Score = 137 bits (346), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 185/803 (23%), Positives = 325/803 (40%), Gaps = 168/803 (20%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+ + + V FPY + Y Q +MC + TLD GHC +LE P+GTGK++SLL +
Sbjct: 3 FFIDDLPVLFPYPRIYPEQYAYMCDLKKTLDAG---GHC--VLEMPSGTGKTVSLLSLIV 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNK 136
A+QQ+ +L S + + E L F + T G T++ K
Sbjct: 58 AYQQHYPEHRKLIYCSRTMSEIEKALAELKALMKFRAKELGHTEDFRALGLTSR-----K 112
Query: 137 NVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE 196
N+ + P++ R S AV+ +R T +V++K+ E+
Sbjct: 113 NLC--LHPSV---KREKSG-----------------AVVDARCRSLTAGFVKEKKERGED 150
Query: 197 CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMA 256
+L C +N+ + H + G V ++DL+ G+ + C Y++AR M
Sbjct: 151 VEL--------CVYHENLDLLEPHNLVPPG----VFTLDDLLRYGEEHKQCPYFSARRMM 198
Query: 257 DDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLKL 315
++ Y Y+++P I + ++ K I++ DEAHNI+++ ++ S+DI ED L K
Sbjct: 199 PFCNVIIYSYHYLLDPKIAERVSRELSKDCIVVFDEAHNIDNVCIESLSIDITEDSLRKA 258
Query: 316 QM---ELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFS-CWTGDKALRE 371
LE+ +N M ++ + +E +A RE F S D L+E
Sbjct: 259 TRGANNLER--KINEMKTSDAEKLQNEYSKLVEGLQAAEQAREEDQFISNPVLPDDLLKE 316
Query: 372 LQEANISR--------QCFPILLECATKAIKEATDT-ESELPHLSGMSVI---------- 412
NI R + F L+ K + ++T S L H+ ++ I
Sbjct: 317 AVPGNIRRAEHFVSFLKRFIEYLKTRMKVMHTISETPPSFLTHVKDLTYIERKPLRFCAE 376
Query: 413 -------TLEGL-------FSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTL 458
TLE + + F + ++ + L L+ + + P L
Sbjct: 377 RLTSLVRTLELINIEDYQPLQEVATFATLVATYEKGFLLILEPFESEAATVPNP----VL 432
Query: 459 SLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQ-VL 517
CL+ A+ K V + S+I+TSGTLSP+ + LG F ++ + + + + L
Sbjct: 433 HFTCLDAAIAIKPVFDRFSSVIITSGTLSPLEMYPKMLG--FNAVMQESYSMTLARRSFL 490
Query: 518 TSVISTGPDNYPLNASYK---------------------TADG-------YKLMEKLCNR 549
V++ G D +++S++ T DG Y ME + +
Sbjct: 491 PMVVTRGSDQAQISSSFQIRNDPGVVRNYGNLVLEFSRITPDGVVVFFPSYLYMESIISM 550
Query: 550 WRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNND 609
W+ G + K + VE + + L+ Y + G
Sbjct: 551 WQGMGILDSIWNYKLILVETPDAQESS--LALETYRTACCNG------------------ 590
Query: 610 LNTIESQENANKKGASFLAVCRGKIVVGIPFPN-----INDIQVSLKKKYNDTYRSSKNL 664
+GA L V RGK+ GI F + + +I V + + ++
Sbjct: 591 ------------RGALLLCVARGKVSEGIDFDHHYGRAVINIGVPFQYTESRILKARLEF 638
Query: 665 L------SGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRK 718
L N++ A R Q +GR +R + DYG ++L D RFQ++RN+ + KW+ +
Sbjct: 639 LRENYRIRENDFLSFDAMRHAAQCLGRVLRGKDDYGVMVLADRRFQKKRNQ--LPKWINQ 696
Query: 719 SIKQYD---SFDASLEGLKSFFR 738
++ + + S D + K+F R
Sbjct: 697 AMLESETNLSTDMAAATAKNFLR 719
>gi|119495148|ref|XP_001264365.1| TFIIH complex helicase Rad3, putative [Neosartorya fischeri NRRL
181]
gi|119412527|gb|EAW22468.1| TFIIH complex helicase Rad3, putative [Neosartorya fischeri NRRL
181]
Length = 794
Score = 137 bits (345), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 185/797 (23%), Positives = 334/797 (41%), Gaps = 156/797 (19%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+ + + V FPY + Y Q +MC + TLD GHC +LE P+GTGK++SLL +
Sbjct: 3 FMIDDLPVLFPYPRIYPEQYAYMCDLKKTLDAG---GHC--VLEMPSGTGKTVSLLSLII 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAM-NN 135
A+QQ+ +L S + + E L F + T G T++ + +
Sbjct: 58 AYQQHYPEHRKLIYCSRTMSEIEKALAELKELMKFRTQQLGYTEDFRALGLTSRKNLCLH 117
Query: 136 KNVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDE 195
+VK++ + T V+ +R T +V++K+ E
Sbjct: 118 PSVKREKSGT----------------------------VVDARCRSLTAGFVKEKKERGE 149
Query: 196 ECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSM 255
+ +L C +N+ + H + G V ++ L+ G+ + C Y++AR M
Sbjct: 150 DVEL--------CVYHENLDLLEPHNLVPPG----VFTLDGLLKYGEEHKQCPYFSARRM 197
Query: 256 ADDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLK 314
++ Y Y+++P I + ++ K I++ DEAHNI+++ +A S+DI ED L K
Sbjct: 198 MPYCNVIIYSYHYLLDPKIAERVSRELSKDCIVVFDEAHNIDNVCIEALSIDITEDSLRK 257
Query: 315 -------LQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDK 367
L+ ++ ++ S + Q E ++ + G R+A A+ E Q + D
Sbjct: 258 ATRGANNLERKISEMKSSDAEKLQN--EYSKLVEGL---REAEQARDEDQFIANPVLPDD 312
Query: 368 ALRELQEANISR-QCFPILLECATKAIK---EATDTESELP-----HLSGMSVI------ 412
L+E NI R + F L+ + +K + T T SE P H+ ++ I
Sbjct: 313 LLKEAVPGNIRRAEHFVAFLKRFIEYLKTRMKVTHTISETPPSFLTHVKDLTFIERKPLR 372
Query: 413 -----------TLEGL-------FSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNW 454
TLE + + F + ++ + L L+ + + P
Sbjct: 373 FCAERLTSLVRTLELVNIEDYQPLQEVATFATLVSTYDKGFLLILEPFESETATVPNP-- 430
Query: 455 THTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDL 514
L CL+ A+ K V + S+I+TSGTLSP+ + LG F T L+ + + +
Sbjct: 431 --VLHFTCLDAAIAIKPVFDRFSSVIITSGTLSPLEMYPKMLG--FPTVLQESYTMTLAR 486
Query: 515 Q-VLTSVISTGPDNYPLNASYK---------------------TADG-------YKLMEK 545
+ L +++ G D +++S++ T DG Y ME
Sbjct: 487 RSFLPMIVTRGSDQAQISSSFQIRNDPGVVRNYGNIVLEFSRITPDGIVVFFPSYLYMES 546
Query: 546 LCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKRE 605
+ + W+ G + K + VE SQE + L+ Y + G + R K
Sbjct: 547 IISMWQGMGILDSIWNYKLILVETP-DSQES-SLALETYRTACCNGRGAILFCVARGKVS 604
Query: 606 GNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKY-NDTYRSSKNL 664
D + + G R + +G+PF + + ++ + YR
Sbjct: 605 EGIDFD--------HHYG-------RAVLCIGVPFQYTESRILKARLEFLRENYR----- 644
Query: 665 LSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYD 724
+ N++ A R Q +GR +R + DYG ++L D RFQ++RN+ + KW+ +++ + +
Sbjct: 645 IRENDFLSFDAMRHAAQCLGRVLRGKDDYGIMVLADRRFQKKRNQ--LPKWISQAMLESE 702
Query: 725 ---SFDASLEGLKSFFR 738
S D ++ K+F R
Sbjct: 703 TNLSTDMAVATAKNFLR 719
>gi|121704642|ref|XP_001270584.1| DEAD_2 domain protein [Aspergillus clavatus NRRL 1]
gi|206558082|sp|A1CJ34.1|CHL1_ASPCL RecName: Full=ATP-dependent RNA helicase chl1; AltName:
Full=Chromosome loss protein 1
gi|119398730|gb|EAW09158.1| DEAD_2 domain protein [Aspergillus clavatus NRRL 1]
Length = 731
Score = 137 bits (345), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 161/690 (23%), Positives = 279/690 (40%), Gaps = 136/690 (19%)
Query: 144 PTIFYASRTHSQISQVISEYKKTAY--------------------RVPMAVLASRKHYCT 183
P IFY SRTHSQ++Q SE ++ RV L SRK+ C
Sbjct: 75 PKIFYCSRTHSQLAQFASELRRVEMPPSLPKELSEKLTDSEALEERVKHLSLGSRKNLCI 134
Query: 184 NKYVRDKEN---IDEECKLLLGDRNLGCPQFKNVHKVRGHPS---------LQKGGCHEV 231
N V EN I+E C +L P H+ PS + V
Sbjct: 135 NPRVMKLENATAINERCM------DLQQPGMAVEHRCPYLPSKDDEPQVLQFRDHTLATV 188
Query: 232 HDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDE 291
DIED+ +G+ + C YYA+RS+ +++V PY ++ R A+ + IK I+I+DE
Sbjct: 189 KDIEDMGKLGKHIGVCPYYASRSVIKHSEIVTLPYPLLLQRSAREALGLSIKNHIVIIDE 248
Query: 292 AHNIEDIARDAGSVDIDEDVLLKLQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATL 351
AHN+ D + SV I L +LQ + Q+ + L + + + R +++
Sbjct: 249 AHNLMDAISNIHSVTI---TLSQLQTAIFQLTTYARKFKTRLKGKNRTYIAQVIRLVSSV 305
Query: 352 AK--REFQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGM 409
A R Q G +L Q P L + K A + + +
Sbjct: 306 ADHLRSIQGSNQPPDGAVKTSDLMAGKGVDQINPYKLSHYLQESKLARKVDGYVEYSKDT 365
Query: 410 SVITLEGLFSSLTYFFSRNGSHVSDYQLALQK-------YIKRDSKNPGGNWTHTLSLWC 462
+ G S+ F HV + L L + +D + L
Sbjct: 366 ANRQSHGKPSTPVLF------HVQSFLLPLMNPSAEGRLFYMKDQNDI------QLKYLL 413
Query: 463 LNPAVVFKDVAELSLSIILTSGTLSPMNSFSSEL-----GVQFGTCLEAPHVIDVDLQVL 517
L+P F+++ E + ++IL GT+SPM+ + + L + T HVI + ++
Sbjct: 414 LDPTNHFREIVEDARAVILAGGTMSPMSDYMNHLFPYVPASRLDT-FSYGHVIPPE-NLV 471
Query: 518 TSVISTGPDNYPLNASYKTAD----------------------------GYKLMEKLCNR 549
++ G + +Y++ D Y + ++ +
Sbjct: 472 AHTLAQGVMGCAFDFTYESRDSEKMIIDLGRTVATLCQAIPDGVVAFFPSYDYLSRILHI 531
Query: 550 WRETGQWSR-------LNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRV 602
W++ + + KKP+ E + + + +I L+ Y +I GS +
Sbjct: 532 WKKPLGADKNQTILGLIERKKPILYESRDMTTKSDDI-LQEYTRTIDSGSGALL------ 584
Query: 603 KREGNNDLNTIESQENANKKGASFL-AVCRGKIVVGIPFPNIND------IQVSLKKKY- 654
L+ I + + +G +F + RG +++G+PFPNI +Q +K Y
Sbjct: 585 -------LSVIGGKLS---EGINFSDRLGRGVLIIGLPFPNIRSAVWQAKLQYVEQKAYS 634
Query: 655 ----NDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRA 710
++T R +G ++Y N RA+NQ IGR IRHR DY AI+++D R+ + +
Sbjct: 635 GSSGSETDRQMIAKAAGRDFYENACMRAVNQCIGRAIRHRNDYAAIVMIDRRYDKPNIQG 694
Query: 711 HISKWLRKSIKQYDS---FDASLEGLKSFF 737
+ W+++S+ + + A+++ L FF
Sbjct: 695 KLPAWIKQSMVRSPTQRPAGATVQNLIKFF 724
>gi|300123500|emb|CBK24772.2| unnamed protein product [Blastocystis hominis]
Length = 280
Score = 137 bits (345), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 94/288 (32%), Positives = 145/288 (50%), Gaps = 38/288 (13%)
Query: 17 AYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
++ G+ V+FP+ PY Q +M VI ++ + +A+LESPTGTGK+LSLLCS L
Sbjct: 14 SFDYNGVSVQFPFPPYDIQKDYMRMVIDSIQNRK-----NAMLESPTGTGKTLSLLCSAL 68
Query: 77 A---WQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAM 133
A ++ + Q A+ + + +++D +A G I P ++ A
Sbjct: 69 AAIDFRMTSYIPKQYADHLKNIETSNSISDKVAKGMA-------RKISPISSADVA---- 117
Query: 134 NNKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENI 193
+ Y SRTH+QI Q++ E KKT YR + VLASR C N+ VR
Sbjct: 118 ---------GRKLIYCSRTHTQIKQIVREIKKTVYRPKLMVLASRDQMCINQDVRGLPQY 168
Query: 194 DEE--CKLLLGDRNLGCPQFKNVHK--VRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSY 249
+ C L L CP +NV+ + +Q E+ DIEDL G+ C Y
Sbjct: 169 AQRATCHFL----GLTCPYHRNVNGDIISDLFHVQPPRERELMDIEDLYAYGRRRNVCPY 224
Query: 250 YAARSMAD--DAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNI 295
Y AR +++L+ PY+YI++ IR + +D++ ++I+DEAHNI
Sbjct: 225 YIARHEVSMIESELLLMPYNYIMDYHIRSRLNLDLQECVVIVDEAHNI 272
>gi|145512032|ref|XP_001441938.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124409199|emb|CAK74541.1| unnamed protein product [Paramecium tetraurelia]
Length = 927
Score = 137 bits (344), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 150/310 (48%), Gaps = 49/310 (15%)
Query: 457 TLSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQ 515
T+ +WCL P++ F+ + ++ S++LTSGTLSP+ S++ EL + F T +PH+I++
Sbjct: 472 TIYMWCLEPSLAFQRILSKNIHSVLLTSGTLSPLQSWTCELRMNFQTQFSSPHIINIQQN 531
Query: 516 VLTSVISTGPDNYP---------------LNASYKTADG-------YKLMEKLCNRWRET 553
++ +Y LN SY +G Y LM K ++ +
Sbjct: 532 LIVFQHKQFDFSYQQRNNDEQFNRLGQNLLNYSYVIPNGILVIFSSYSLMFKFRSKLTTS 591
Query: 554 GQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTI 613
RLN K EP+ + + V + Y +G+ V++ +V
Sbjct: 592 KLLFRLNEIKHCLWEPQQTV--EMQNVFELYKQHSKKGAIMFAVQRGKV----------- 638
Query: 614 ESQENANKKGASFL-AVCRGKIVVGIPFPNINDIQVS-----LKKKYNDTYRSSKNLLSG 667
+G F +CR +VG+P+P D +VS L+K YND + ++ L
Sbjct: 639 -------AEGIDFSDELCRAVFLVGVPYPPKQDHKVSQKMEYLEKIYNDPEFNDQDRLKS 691
Query: 668 NEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFD 727
EWYC QA RA NQA+GR IRH DYG + L D+RF+ R S+W++ ++K + + D
Sbjct: 692 QEWYCQQAIRATNQALGRVIRHVNDYGIVFLCDKRFEYTDIRKGFSEWVKTALKPWANDD 751
Query: 728 ASLEGLKSFF 737
L+ K+F+
Sbjct: 752 EVLKQTKAFY 761
Score = 129 bits (325), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 91/319 (28%), Positives = 150/319 (47%), Gaps = 67/319 (21%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ ++ FP++PY QL +M V+ +LDR +ALLESPTGTGK+LSLLC++L W
Sbjct: 50 LAYTEIYFPHKPYDVQLKYMESVVQSLDRKH-----NALLESPTGTGKTLSLLCASLGWL 104
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVK 139
+ + Q AN P+ +
Sbjct: 105 SKHRKEQQKAN-------------------------NPTKL------------------- 120
Query: 140 KKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTN-KYVRDKEN-IDEEC 197
I YASRTH+Q+ QV E KKT Y+ ++VL SR YC + K N +++ C
Sbjct: 121 -----RIIYASRTHAQLKQVAQELKKTVYKPNVSVLGSRDQYCLRGDFYNIKGNLLNQNC 175
Query: 198 KLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMAD 257
+ ++ C FK V +LQ ++++E+ G + C YY R D
Sbjct: 176 RKVVKANQ--CQYFKK--DVVMFMALQYKTL--INNLEEAKQFGYKNKICPYYFERQRMD 229
Query: 258 DAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQM 317
+A ++ PY+Y++ + + +D +ILI DEAHN++ A + S I ++++++ +
Sbjct: 230 EADIILLPYNYLLEKDFQDYVNID--NSILIFDEAHNVQSTAEEGSSFFITQNIIIEAEK 287
Query: 318 ELEQVC---SVNPMIYQPL 333
+LE+ P+ Y+ L
Sbjct: 288 DLEKWIDELETVPIFYEQL 306
>gi|118383994|ref|XP_001025150.1| DNA repair helicase (rad3) [Tetrahymena thermophila]
gi|89306917|gb|EAS04905.1| DNA repair helicase (rad3) [Tetrahymena thermophila SB210]
Length = 1032
Score = 137 bits (344), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 166/357 (46%), Gaps = 73/357 (20%)
Query: 432 VSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLS-IILTSGTLSPMN 490
+ DY+L + D +NP L+L CLNP++ FK + + ++ TSGTL P N
Sbjct: 519 MQDYKLY---FDLEDPENP------QLNLTCLNPSLNFKKILQQDPHCLLFTSGTLKPFN 569
Query: 491 SFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTADGYKLMEKLCNRW 550
+ +EL + F LE HVID Q+ ++VI P + +YK + ++
Sbjct: 570 FWKTELQIPFNVILENKHVIDSKKQLFSAVIKGRPSKSSVITTYKQTFNFSYEKR----- 624
Query: 551 RETGQWSRLNAKKPLFVEPKGGSQEDFEIV---LKHYYNSISQGSKCA------------ 595
+ + ++ E FEI+ + + S ++C
Sbjct: 625 ----------KDQDMILDLGNALAELFEIIPNGVLIVFPSNQLMNQCRSQWSNFFSNQNS 674
Query: 596 ----------VVRKKRVKREGNNDLNTIES-----QENANKKGASFLAVCRGKI------ 634
++ KK + EG + T+ + Q++ +KG++F V RGKI
Sbjct: 675 NNQQQKIYNRLLSKKFIYWEGKTNTETMSAMQDFRQKSKTQKGSAFFCVARGKITEGIDF 734
Query: 635 ---------VVGIPFPNINDIQVSLKKKY-NDTYRSSKNLLSGNEWYCNQAFRALNQAIG 684
++G+P+P + +I + +KK Y N + + ++GNEWY +A RA+NQ+IG
Sbjct: 735 ADESARAVILIGLPYPPLKNINIQVKKDYLNQQSKLNSQRINGNEWYVQEAIRAMNQSIG 794
Query: 685 RCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFRDVK 741
R IRH D+G++I LDERF ++ H+ W +Q DSFD +L L FF + K
Sbjct: 795 RVIRHINDWGSVIFLDERFGQQDIIKHMPSWCL--TQQIDSFDQALIQLSQFFSEKK 849
Score = 124 bits (312), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 137/306 (44%), Gaps = 65/306 (21%)
Query: 19 HVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
++ I+V FP++PY Q+V+M VI L H LLESPTGTGK+LS+LC+ L W
Sbjct: 67 NINNIEVYFPHKPYDVQVVYMESVIKCLQE-----RTHGLLESPTGTGKTLSMLCACLGW 121
Query: 79 QQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNV 138
+ + + + D + N
Sbjct: 122 ------------LQQRREQQQGIKDIIPN------------------------------- 138
Query: 139 KKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKEN--IDEE 196
I Y SRTHSQI QV+ E K TAY+ + V SR+ YC K + + ++
Sbjct: 139 ------RIIYCSRTHSQIQQVVKEIKTTAYQPKIIVQGSREQYCIKKEFQQLKGGLLNTS 192
Query: 197 CKLLLGDRN--LGCPQFK-NVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAAR 253
C+ + N C FK + + R L+ + DIEDL + G C +Y +
Sbjct: 193 CQKAISQLNPQTYCRYFKGTMDESRDFFKLR------MPDIEDLRSDGYNNNYCPFYHTQ 246
Query: 254 SMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLL 313
+ + ++F PY+Y+++ + ++IK A++I DEAHNI A + S+ ++ L
Sbjct: 247 KVNNAVDVLFLPYNYLLDRNVMNQANINIKNAVIIFDEAHNIHKSAEEGYSLFLNYSSLC 306
Query: 314 KLQMEL 319
+ +L
Sbjct: 307 AAEADL 312
>gi|313233732|emb|CBY09902.1| unnamed protein product [Oikopleura dioica]
Length = 1145
Score = 136 bits (343), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 97/314 (30%), Positives = 142/314 (45%), Gaps = 63/314 (20%)
Query: 17 AYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
YH I V FPY+PY +Q +M + I L CHA+LESPTGTGK+L LL S L
Sbjct: 5 VYH--EITVRFPYEPYPAQDSYMSKCIEALKSG-----CHAILESPTGTGKTLCLLASVL 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNK 136
A++++ + E + V
Sbjct: 58 AFREH-----------------------------YFAEMKKCVQSGVAGAHMGHV----- 83
Query: 137 NVKKKMTPTIFYASRTHSQISQVISEYKKT----AYRVPMAVLASRKHYCTN---KYVRD 189
P I Y+SRTHSQ+SQV+SE KK Y + M+V+ R C N K + D
Sbjct: 84 -------PKIIYSSRTHSQLSQVVSELKKLHTVCGYNIDMSVIGGRGSTCLNPKVKKIAD 136
Query: 190 KENIDEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSY 249
C L + C F + + +L G + DIEDLV C+Y
Sbjct: 137 GRLQQNTCSALCKAKK--CHWFNTLDSM-NEETLPGG----ILDIEDLVTWSTKRVSCAY 189
Query: 250 YAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDE 309
Y R +A+ A+++ PY+Y+++P +R ++++ ILI DEAHN+E + DA S ++
Sbjct: 190 YLGRRLAEKAEIILLPYNYLLDPRLRTRHKLEVANKILIFDEAHNVEGVCEDAASFELT- 248
Query: 310 DVLLKLQMELEQVC 323
+ L ME +VC
Sbjct: 249 STEIALAMEECKVC 262
Score = 126 bits (316), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 104/346 (30%), Positives = 155/346 (44%), Gaps = 93/346 (26%)
Query: 458 LSLWCLNPA-VVFKDVAELSLSIILTSGTLSPMNSFSSELGV-----QFGTCLEAPHVID 511
+ +WC +P+ + + E + SIILTSGTLSP+ + S LG+ + L HV+
Sbjct: 417 ICMWCFDPSKSITHLLDEGAKSIILTSGTLSPIEEYISNLGLDRHNSRLPVTLVNKHVVS 476
Query: 512 VDLQVLTSVISTGPDNYPLN---------------------ASYKTAD---------GYK 541
D QV + + G N PL+ AS K+A Y+
Sbjct: 477 SD-QVFVATVPKGMGNSPLDMINVYSNRQNSRMFAQMGEIIASAKSASPGGLLVFHPTYR 535
Query: 542 LMEKLCNRWRETGQWSRLNAKKP--------LFVEPKGGSQEDFEIVLKHYYNSISQGSK 593
LM + W G + NA P +F+EP ++ D E V + Y +I
Sbjct: 536 LMNICRDFW---GIMNGANASNPSGNMFKRKIFIEP--SNKNDLEQVNRDYETAIVD--- 587
Query: 594 CAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGI 638
N E+Q G + VCRGK I+ GI
Sbjct: 588 -----------------NNFEAQ------GGILMGVCRGKISEGVDFADARGRVVIITGI 624
Query: 639 PFPNINDIQVSLKKKYND-TYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAII 697
P+ D +V +KK+Y D +R ++++SGN+WY QA RA+NQAIGR IRHR D+GAII
Sbjct: 625 PYAPAMDPKVKMKKEYVDIAFREKRSVISGNDWYQIQAARAINQAIGRIIRHRNDFGAII 684
Query: 698 LLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFRDVKGW 743
LD+RF + + + ++ W+ KS Q D + L+ FF + +
Sbjct: 685 YLDKRFADPKMQKYMPSWV-KSNHQTIMGDQIADKLRIFFNKMASY 729
>gi|145355132|ref|XP_001421822.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582061|gb|ABP00116.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 849
Score = 136 bits (343), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 159/664 (23%), Positives = 262/664 (39%), Gaps = 152/664 (22%)
Query: 146 IFYASRTHSQISQVISEYKKTAYRVPMA---------VLASRKHYCTNKYVRD---KENI 193
+ SRTHSQ++QVI E K+T + +A +A R C N V+ I
Sbjct: 179 VILCSRTHSQLTQVIGELKRTVFGGSVANAEEQVAVAAVAGRAQLCVNPAVKSLGSAARI 238
Query: 194 DEEC------KLLLGDRNL--GCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVR 245
+E C K G++ CP K L++ + DIEDL +G+ R
Sbjct: 239 NERCLDMSKGKAKPGEKTKIKACPYLSKRRKA--MLELKEAALAKPMDIEDLAKLGESSR 296
Query: 246 GCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSV 305
C YYAARS +A LV PY+ +++ R + V ++ A+++ DEAHN+ D ++
Sbjct: 297 ACPYYAARSALPEADLVLMPYASLLHADTREILGVKLENAVVVFDEAHNLVDAVHNSYGA 356
Query: 306 DIDEDVLLKLQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTG 365
+ L Q+ VN M+ + ++ER K L+ ++ +
Sbjct: 357 AV----------TLNQLSDVNDMLTE-----------YVERFKTRLSANNLRYLRTLTNI 395
Query: 366 DKALRELQEANISRQCFP---------ILLECATKAIK----EATDTESELPH------- 405
+A ++ + P L EC + ES++ H
Sbjct: 396 TRAFVKVLAKETEDESKPQKRLTTLNDFLFECGQDTVNMFSLRRYLKESKVAHKIASYGE 455
Query: 406 --LSG--MSV--ITLE-------------------GLFSSLTYFFSRNGSHVSDYQLALQ 440
SG MSV + +E G +LT S SD ++ +
Sbjct: 456 RVRSGENMSVDGVKMETIGRTKVAVAPDPNAAPRVGAVHALTSLIDALASADSDGRMIYE 515
Query: 441 KYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSEL---- 496
+ P G+ TL L+ A FK V E + S+IL GTL+P+ ++L
Sbjct: 516 R------ATPEGD-PATLRFVLLDAASRFKRVVEQARSVILVGGTLAPIPELVAQLFPDL 568
Query: 497 --------GVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKT-AD--------- 538
G + H+I D +L +S GP L+ ++ AD
Sbjct: 569 QSQTAPAPGARQLKTFTCGHIIPRD-NLLPIALSAGPTGVALDFTHGARADVSVIDELGR 627
Query: 539 ------------------GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIV 580
+K +++ RW TG + + K ++ EP+ S E
Sbjct: 628 ILLNACRVSPGGACVFFPSFKYADEVYARWESTGAMASIRGVKDVYREPRDAST--LEQC 685
Query: 581 LKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFL-AVCRGKIVVGIP 639
L+ Y S+S+G+ R G L + + + +G +F + R ++VG+P
Sbjct: 686 LRDYAASVSRGAST---------RNGGAVLLCVVGGKLS--EGINFKDELGRLVVMVGLP 734
Query: 640 FPNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILL 699
+ N+ D ++ + + DT N G +Y R +NQ+IGR IRH DY I+L
Sbjct: 735 YANVADAELKARMDHLDT--GPGNQGRGRAYYEALCMRGVNQSIGRAIRHVGDYACILLC 792
Query: 700 DERF 703
D+R+
Sbjct: 793 DKRW 796
>gi|259488995|tpe|CBF88902.1| TPA: 5' to 3' DNA helicase (Eurofung) [Aspergillus nidulans FGSC
A4]
Length = 791
Score = 136 bits (343), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 179/798 (22%), Positives = 332/798 (41%), Gaps = 158/798 (19%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+ + + V FPY + Y Q +MC + TLD GHC +LE P+GTGK+++LL +
Sbjct: 3 FFIDDLPVLFPYPRIYPEQYAYMCDLKKTLDAG---GHC--VLEMPSGTGKTVTLLSLIV 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAM-NN 135
A+QQ+ +L S + + E L F E T G T++ + +
Sbjct: 58 AYQQHYPEHRKLIYCSRTMSEIEKALAELRELMKFRSEQLGYTEDFRALGLTSRKNLCLH 117
Query: 136 KNVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDE 195
+VK++ + T V+ +R T +V++K+ E
Sbjct: 118 PSVKREKSGT----------------------------VVDARCRSLTAGFVKEKKEKGE 149
Query: 196 ECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSM 255
+ +L C +N+ + H + G V ++ L+N G+ + C Y++AR M
Sbjct: 150 DVEL--------CVYHENLDLLEPHNLVPPG----VFTLDGLLNYGEQHKQCPYFSARRM 197
Query: 256 ADDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLK 314
++ Y Y+++P I + + K I++ DEAHNI+++ ++ S+DI ED L K
Sbjct: 198 MPYCNVIIYSYHYLLDPKIAERVSKEFSKDCIVVFDEAHNIDNVCIESLSIDITEDSLRK 257
Query: 315 -------LQMELEQVCSVNPMIYQPLIEMTQDLVGWIE-RRKATLAKREFQHFFSCWTGD 366
L+ +++ V S + ++ + + +E R+A A+ E Q + D
Sbjct: 258 ATRGANNLERKIQDVKSSDAE------KLNNEYMKLVEGLREAEQARDEDQFISNPVLPD 311
Query: 367 KALRELQEANISR-QCFPILLECATKAIK---EATDTESELP-----HLSGMSVI----- 412
L+E NI R + F L+ + +K + T T SE P H+ ++ I
Sbjct: 312 DLLKEAVPGNIRRAEHFVAFLKRFIEYLKTRMKVTHTISETPLSFLNHVKELTFIERKPL 371
Query: 413 ------------TLEGL-------FSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGN 453
TLE + + F + ++ + L L+ + + P
Sbjct: 372 RFCAERLTSLVRTLELINIEDYQPLQEVATFATLVSTYDKGFLLILEPFESEAATVPNP- 430
Query: 454 WTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVD 513
L CL+ A+ K V + S+++TSGTLSP+ + LG F T ++ + + +
Sbjct: 431 ---VLHFTCLDAAIAIKPVFDRFSSVVITSGTLSPLEMYPKMLG--FTTVMQESYSMTLA 485
Query: 514 LQ-VLTSVISTGPDNYPLNASYK---------------------TADG-------YKLME 544
+ L +++ G D +++S++ T DG Y ME
Sbjct: 486 RRSFLPMIVTRGSDQAQISSSFQIRNDPGVVRNYGNIVLEFSRITPDGVVVFFPSYLYME 545
Query: 545 KLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKR 604
+ + W+ G + K + VE + + L+ Y + G + R K
Sbjct: 546 SIISMWQGMGILDSIWNYKLILVETPDAQESS--LALETYRTACCNGRGALLFCVARGKV 603
Query: 605 EGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKY-NDTYRSSKN 663
D + + G R + +G+PF + + ++ + YR
Sbjct: 604 SEGIDFD--------HHYG-------RAVLCIGVPFQYTESRILKARLEFLRENYR---- 644
Query: 664 LLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQY 723
+ N++ A R Q +GR +R + DYG ++L D RFQ++RN+ + KW+ +++ +
Sbjct: 645 -IRENDFLSFDAMRHAAQCLGRVLRGKDDYGIMVLADRRFQKKRNQ--LPKWISQALLES 701
Query: 724 D---SFDASLEGLKSFFR 738
+ S D ++ K+F R
Sbjct: 702 ETNLSTDMAVATAKNFLR 719
>gi|325090321|gb|EGC43631.1| DNA repair helicase RAD3 [Ajellomyces capsulatus H88]
Length = 797
Score = 135 bits (341), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 184/796 (23%), Positives = 332/796 (41%), Gaps = 154/796 (19%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+ + + V FPY + Y Q +MC + TLD GHC +LE P+GTGK++SLL +
Sbjct: 3 FFIDDLPVLFPYPRIYPEQYAYMCDLKKTLDAG---GHC--VLEMPSGTGKTVSLLSLIV 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNK 136
A+QQ+ + +L S + + E L + Q A + +
Sbjct: 58 AYQQHQPEQRKLIYCSRTMSEIEKALAELKALMKY-------------RAQQLGFAEDFR 104
Query: 137 NVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE 196
+ SR + + + K AV+ +R T +V++K+ E+
Sbjct: 105 GLG--------LTSRKNLCLHPSVKREKSG------AVVDARCRSLTAGFVKEKKEKGED 150
Query: 197 CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMA 256
+L + NL + N+ + G V ++D+ G+ + C Y++ R M
Sbjct: 151 VELCIYHENLDLLEPSNL--------VPPG----VFTLDDITKYGEQHKQCPYFSVRRMM 198
Query: 257 DDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLK- 314
+++ Y Y+++P I + ++ K +I++ DEAHNI+++ ++ S+D+ ED L K
Sbjct: 199 PFCKVIIYSYHYLLDPKIAERVSQELSKDSIVVFDEAHNIDNVCIESLSIDLTEDSLRKA 258
Query: 315 ------LQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKA 368
L+ ++E++ + + L Q LV + R+A A++E Q + D
Sbjct: 259 SRGANNLERKIEEMKRSDA---EKLQNEYQKLVEGL--READEARQEEQLMANPALPDDL 313
Query: 369 LRELQEANISR-QCFPILLECATKAIK---EATDTESELP-----HLSGMSVI------- 412
L+E NI R + F L+ + +K + T T SE P HL ++ I
Sbjct: 314 LKEAVPGNIRRAEHFVAFLKRFIEYLKTRMKITHTISETPLSFLAHLKDLTFIERKPLRF 373
Query: 413 ----------TLEGL-------FSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWT 455
TLE + + F + ++ + L L+ + + P
Sbjct: 374 CAERLTSLVRTLELVNLEDYQPLQQVAAFATLAATYEKGFLLILEPFESETATVPNP--- 430
Query: 456 HTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQ 515
L CL+ A+ K V + S+I+TSGTLSP+ + L +F T L+ + + + +
Sbjct: 431 -ILHFTCLDAAIAIKPVFDRFSSVIVTSGTLSPLEMYPKML--KFTTVLQESYTMTLARR 487
Query: 516 -VLTSVISTGPDNYPLNASYK---------------------TADG-------YKLMEKL 546
L V++ G D +++S++ T DG Y ME +
Sbjct: 488 SFLPMVVTRGSDQAQISSSFQIRNDPGVVRNYGNLLLEFSRITPDGVVVFFPSYLYMESI 547
Query: 547 CNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREG 606
+ W+ G + K + VE SQE + L+ Y + G ++ R K
Sbjct: 548 ISMWQGMGILDLVWNYKLILVETP-DSQES-SLALETYRTACCNGRGAVLLCVARGKVSE 605
Query: 607 NNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKY-NDTYRSSKNLL 665
D + + G R I +G+PF + + ++ + YR +
Sbjct: 606 GIDFD--------HHYG-------RAVICIGVPFQYTESRILKARLEFLRENYR-----I 645
Query: 666 SGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYD- 724
N++ A R Q +GR IR + DYG ++L D RFQ + R + KW+ +++ + +
Sbjct: 646 RENDFLSFDAMRHAAQCLGRVIRGKDDYGVMVLADRRFQ--KRRTQLPKWISQAMLESET 703
Query: 725 --SFDASLEGLKSFFR 738
S D ++ KSF +
Sbjct: 704 NLSTDMAVATAKSFLK 719
>gi|145525869|ref|XP_001448751.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124416306|emb|CAK81354.1| unnamed protein product [Paramecium tetraurelia]
Length = 913
Score = 135 bits (341), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 99/308 (32%), Positives = 153/308 (49%), Gaps = 47/308 (15%)
Query: 457 TLSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVD-- 513
+L++WCL+P++ FK + ++ SII TSGTL+PM S+ SEL ++F L HVID+
Sbjct: 449 SLNMWCLDPSLAFKKLKLNNICSIIFTSGTLAPMESWQSELQMEFKIQLSNKHVIDIANN 508
Query: 514 ---LQVLT------------SVISTGPDNYPLNASYKTADG-------YKLMEKLCNRWR 551
Q L+ +I+ G LN S G Y LM+ + RW
Sbjct: 509 VRAFQHLSFDFSYQKRENEDQIINLGLA--ILNFSKVIKGGIIIVFSSYGLMQNIRRRWA 566
Query: 552 ETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLN 611
RLN K E +G +Q F L+ + + +G+ V + +V EG DL+
Sbjct: 567 NQQLIQRLNEVKKCLWEEQGSAQ--FHNTLEVFKQNGQKGAILFAVHRGKVT-EG-IDLS 622
Query: 612 TIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYNDTYRS-SKNLLSGNEW 670
+CR ++GIP+P + D ++ LKK++ D + ++ L+ +W
Sbjct: 623 D---------------DLCRAVFLIGIPYPPLKDQKIKLKKQFLDQQLAKNRQGLTSKDW 667
Query: 671 YCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASL 730
Y QA RA NQAIGR IRH DYG I D RF + +SKW++ +I+ + + + L
Sbjct: 668 YMQQAVRATNQAIGRVIRHINDYGVIFFCDRRFLWSNMKNSLSKWVQPAIQSWKNDEDVL 727
Query: 731 EGLKSFFR 738
LK+FF+
Sbjct: 728 FNLKNFFQ 735
Score = 119 bits (299), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 90/313 (28%), Positives = 145/313 (46%), Gaps = 66/313 (21%)
Query: 10 NYRKPLNAYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSL 69
N ++ LN + ++ FP++PY Q+ +M V+ LD+ C+ LLESPTGTGK+L
Sbjct: 32 NIQEKLN---IENTEIYFPHKPYDVQVKYMESVVQILDKK-----CNGLLESPTGTGKTL 83
Query: 70 SLLCSTLAWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTA 129
SLLCST+ W + + Q + S
Sbjct: 84 SLLCSTMGWLHKHRKEQQKSGAS------------------------------------- 106
Query: 130 QVAMNNKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRD 189
N+K I YASRTH+Q+ QV E K+T Y ++++ SR YC +
Sbjct: 107 ------SNLK------IIYASRTHAQLKQVAQELKRTVYAPNISMVGSRDQYCLLDFSNL 154
Query: 190 KEN-IDEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCS 248
K N + + C+ L+ RN C QF N + P++ ++ +E+ G C
Sbjct: 155 KGNALIQACRRLV-KRN-KC-QFYNKDSL---PNIAAQNSKLINTLEESKQFGHNNNVCP 208
Query: 249 YYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDID 308
YY R +A L+ PY+Y+++ V+ + +I+I DEAHN+ A + S I+
Sbjct: 209 YYFERERLTNADLILLPYNYLLDREFSNI--VNTENSIIIFDEAHNVPSAAENGQSFFIN 266
Query: 309 EDVLLKLQMELEQ 321
E ++ + + ELE+
Sbjct: 267 ETIVQEAKKELER 279
>gi|121799524|sp|Q2U587.1|CHL1_ASPOR RecName: Full=ATP-dependent RNA helicase chl1; AltName:
Full=Chromosome loss protein 1
gi|83773151|dbj|BAE63278.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 721
Score = 135 bits (339), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 184/813 (22%), Positives = 328/813 (40%), Gaps = 213/813 (26%)
Query: 28 PYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCKLKNQ 87
PY PY QL FM + S +++ + A+ ESPTG LS TL + + K+
Sbjct: 11 PYSPYDIQLQFMRALYSCIEKGKV-----AVFESPTGKLAGLS--TGTLELLKRFQHKSS 63
Query: 88 LANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKKMTPTIF 147
+H + D + ++++K I
Sbjct: 64 ----AHPRQDED---------------------------------YGDEDIK------IL 80
Query: 148 YASRTHSQISQVISEYKKTAYRVPMAV----------------------LASRKHYCTNK 185
Y SRTHSQ++Q SE ++ +P ++ L SRK+ C N
Sbjct: 81 YCSRTHSQLTQFASELRRV--NMPSSIPKDFSEGVADTDGLQEGVRHLSLGSRKNLCINP 138
Query: 186 YVRDKENIDEECKLLLGDRNLG------CPQF------KNVHKVRGHPSLQKGGCHEVHD 233
V +N+ + L + G CP V + R H V D
Sbjct: 139 RVSSLDNVTAISERCLDMQQPGVAAEQRCPFLPSNENEAQVLQFRDHV------LATVKD 192
Query: 234 IEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAH 293
IED+ +G+ + C YYA+RS+ +++V PY ++ R A+++ IKG ++++DEAH
Sbjct: 193 IEDIGKLGKDIGICPYYASRSVTKHSEIVTLPYPLLLQRSARDALDLSIKGHVVVIDEAH 252
Query: 294 NIEDIARDAGSVDIDEDVLLKLQMELEQVCSVN---------------PMIYQPLIEMTQ 338
N+ D + SV I L +LQ L Q+ + + + + +T
Sbjct: 253 NLMDAISNIHSVTI---TLSELQTSLFQLTTYARKFKTRLKGKNRNYIAQVIRLVTSITD 309
Query: 339 DLVGWIERRKATLAKREFQHFFSCWTGD-----KALRELQEANISRQCFPILLECATKAI 393
L +E +A + S D K R L+E+ ++R+ ++ ++
Sbjct: 310 HLKTILETSQAPEGPVQPSDLMSGKGVDQINPYKLCRYLRESKLARK-----VDGYSEFS 364
Query: 394 KEATDTESE-------LPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRD 446
+E D +++ L H+ ++ L L + F+ + D QL KY+ D
Sbjct: 365 RERADRQADRKPSTPVLFHIQSF-LLPLMNLSAEGKLFYIKAQ---GDIQL---KYMLLD 417
Query: 447 SKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSEL-----GVQFG 501
N F+++ + + ++IL GT+SPM + L + G
Sbjct: 418 PMNQ------------------FREIVDDARAVILAGGTMSPMTDYIHHLFPYVPSSRLG 459
Query: 502 TCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTAD---------------GYKLMEKL 546
T HVI + ++ V+ G + +++T D Y + ++
Sbjct: 460 T-FSYGHVIPPE-NLIAQVLGKGVTGTEFDFTFETRDSERMVIPDGVVAFFPSYDYLSQV 517
Query: 547 CNRWRET--GQWSR-----LNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRK 599
+ W+ T G+ +R + KK + E + + E++ + Y SI + A++
Sbjct: 518 LSIWKRTLAGEKNRTVYDLIEGKKTILHESRDVTISTEELLQE--YASIVGSGRGALL-- 573
Query: 600 KRVKREGNNDLNTIESQENANKKGASFL-AVCRGKIVVGIPFPNIND------IQVSLKK 652
L+ + + + +G +F + RG ++VG+PFPNI I +K
Sbjct: 574 ----------LSVVGGKLS---EGINFSDRLGRGVLIVGLPFPNIRSAVWQAKIHYVEQK 620
Query: 653 KYNDTYRSSKNL-----LSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEER 707
Y ++ S N +G ++Y N RA+NQ IGR IRHR DY AI+L+D R+ +
Sbjct: 621 AYKESSGSDANRQLVAKAAGKDFYENSCMRAVNQCIGRAIRHRNDYAAIVLMDRRYDKPA 680
Query: 708 NRAHISKWLRKSIKQYDSF---DASLEGLKSFF 737
+ + W+++S+ + A++ L FF
Sbjct: 681 IQGKLPAWIKQSMASSSALRPAGATIGSLSKFF 713
>gi|71026164|ref|XP_762768.1| DNA helicase [Theileria parva strain Muguga]
gi|68349720|gb|EAN30485.1| DNA helicase, putative [Theileria parva]
Length = 740
Score = 135 bits (339), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 184/790 (23%), Positives = 321/790 (40%), Gaps = 178/790 (22%)
Query: 34 SQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCKLKNQL----- 88
+QL+FM D + L ESPTG+GK+LS+LCS L W +N + K +
Sbjct: 4 NQLIFMKDAYRCFDES-----LFGLFESPTGSGKTLSILCSALTWLKNNRSKTMMCDIGL 58
Query: 89 --------------ANISHSKPDTE---------------AVTDPL--ANGGGFIPESQP 117
A+++H K E V+D L ++G I E+
Sbjct: 59 EPSRDEEVPEWVSQASLNHKKKMVEDVIKDEAVKLEELRKKVSDRLDTSDGKLRIRENYK 118
Query: 118 STIPPSTNGQTAQVAMNNKNVKKKMTPTIFYASRTHSQISQVISEYKK--TAYR-VPMAV 174
+ + T + + N N I SRT SQ++Q + E+K+ T R + +A+
Sbjct: 119 RLLTKPESDTTEENKLENLN-----KTQIIICSRTFSQLNQYVKEFKQLNTINRNIRLAM 173
Query: 175 LASRKHYCTNKYVRDK----ENIDEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHE 230
R C NK ++ K E +++EC R C N + + C+
Sbjct: 174 GTGRSQVCINKQIKSKCKTPEELNDEC------RRSKCEFRSNTTGLS-----EIATCYP 222
Query: 231 VHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILD 290
+ D+EDLV +G+ + C YY+ + +A +V PY +IN +R ++ + IK ILI D
Sbjct: 223 L-DLEDLVRLGKDLGNCPYYSNLTTIPNADIVLAPYVTVINESLRESLGLRIKDNILIFD 281
Query: 291 EAHNIEDIARDAGSVDIDEDVLLKLQMELEQVCS-----VNPMIYQPLIEMTQDLVGWIE 345
E HN+ D ++ + + L +L +L S N ++ Q + E+T+ +V +E
Sbjct: 282 EGHNLTDALTESHASKLTLTGLKQLLHQLGMYVSKYGPKFNELMTQRVSEITKFVVTIVE 341
Query: 346 RRKATLAKREFQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPH 405
+ + + + +T AL +++ I L
Sbjct: 342 NLSKPESSQSLK--ITAFTVKYALEDIKFHEI-------------------------LNF 374
Query: 406 LSGMSVIT-LEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWC-L 463
LS + GL +F + ++ Y + N+ H+L L+C
Sbjct: 375 LSSTDFCRHMRGLAEREYHFRKKKNETIASYTSMVYNL---------KNFVHSL-LYCGS 424
Query: 464 NPAVVFKDVAELSL------------SIILTSGTLSPMNSFSSELGVQFGTCL-EAPHVI 510
N V+ ++S+ S+I+ SGTLSP+ F S + + + V
Sbjct: 425 NDEVIITKSEDISIEIFPVASVGESRSVIVMSGTLSPIEEFLSLAPSRAEVFIHRSLPVF 484
Query: 511 DVDLQVLTSVISTGPDNYPLNASYKTADGYKLMEKLCNRWRETGQWSRLNAKKPLFVEPK 570
+D ++L++VI + L Y + K ++ LC + + P
Sbjct: 485 PLD-RLLSAVIHKDENGDELVFDYSRRENLKELKYLCTLMEIITE-----------IVPG 532
Query: 571 G-----GSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGAS 625
G S ++ K + S S V+ +K V +E N E E +KGA
Sbjct: 533 GIVCFFSSYAYLDVFYKFFLKSSSSNK---VLLRKHVFKEQKNVNIFPEYSECCAEKGAI 589
Query: 626 FLAVCRGK---------------IVVGIPFPNINDIQVSLKKK-YNDTYRSSKNL----- 664
AV G ++VG+P+P ++I++ LK++ YN +S+ N
Sbjct: 590 LFAVFGGSQSEGVDFSDDLARLVLLVGLPYPP-DNIKLKLKREYYNKKCKSTANTHTITI 648
Query: 665 ------LSGNEWYCNQA--------FRALNQAIGRCIRHRFDYGAIILLDERFQEERNRA 710
S +E Y A ++ +NQ IGR +RHR D+ ++LLD R++
Sbjct: 649 TSEAGEQSVSENYSKLAREQRTLLCYKTVNQCIGRAMRHRDDFSGVVLLDSRYKGRDADK 708
Query: 711 HISKWLRKSI 720
+++ +++KSI
Sbjct: 709 YLTDYVKKSI 718
>gi|225560307|gb|EEH08589.1| DNA repair helicase RAD3 [Ajellomyces capsulatus G186AR]
Length = 797
Score = 135 bits (339), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 187/803 (23%), Positives = 332/803 (41%), Gaps = 168/803 (20%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+ + + V FPY + Y Q +MC + TLD GHC +LE P+GTGK++SLL +
Sbjct: 3 FFIDDLPVLFPYPRIYPEQYAYMCDLKKTLDAG---GHC--VLEMPSGTGKTVSLLSLIV 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPL-------ANGGGFIPESQPSTIPPSTNGQTA 129
A+QQ+ + +L S + + E L A GF+ + + + N
Sbjct: 58 AYQQHQPEQRKLIYCSRTMSEIEKALAELKALMKYRAQQLGFVEDFRGLGLTSRKN---- 113
Query: 130 QVAMNNKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRD 189
+ +VK++ + + A R S + + E K+ V + +
Sbjct: 114 --LCLHPSVKREKSGAVVDA-RCRSLTAGFVKEKKEKGGDVELCIY-------------- 156
Query: 190 KENIDEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSY 249
EN+D LL NL P V ++D+ G+ + C Y
Sbjct: 157 HENLD-----LLEPSNLVPPG--------------------VFTLDDITKYGEQHKQCPY 191
Query: 250 YAARSMADDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDID 308
++ R M +++ Y Y+++P I + ++ K +I++ DEAHNI+++ ++ S+D+
Sbjct: 192 FSVRRMMPFCKVIIYSYHYLLDPKIAERVSQELSKDSIVVFDEAHNIDNVCIESLSIDLT 251
Query: 309 EDVLLK-------LQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFS 361
ED L K L+ ++E++ + + L Q LV + R+A A++E Q +
Sbjct: 252 EDSLRKASRGANNLERKIEEMKRSDA---EKLQNEYQKLVEGL--READEARQEEQLMAN 306
Query: 362 CWTGDKALRELQEANISR-QCFPILLECATKAIK---EATDTESELP-----HLSGMSVI 412
D L+E NI R + F L+ + +K + T T SE P HL ++ I
Sbjct: 307 PALPDDLLKEAVPGNIRRAEHFVAFLKRFIEYLKTRMKITHTISETPLSFLAHLKDLTSI 366
Query: 413 -----------------TLEGL-------FSSLTYFFSRNGSHVSDYQLALQKYIKRDSK 448
TLE + + F + ++ + L L+ + +
Sbjct: 367 ERKPLRFCAERLTSLVRTLELMNLEDYQPLQQVAAFATLAATYEKGFLLILEPFESETAT 426
Query: 449 NPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPH 508
P L CL+ A+ K V + S+I+TSGTLSP+ + L +F T L+ +
Sbjct: 427 VPNP----ILHFTCLDAAIAIKPVFDRFSSVIVTSGTLSPLEMYPKML--KFTTVLQESY 480
Query: 509 VIDVDLQ-VLTSVISTGPDNYPLNASYK---------------------TADG------- 539
+ + + L V++ G D +++S++ T DG
Sbjct: 481 TMTLARRSFLPMVVTRGSDQAQISSSFQIRNDPGVVRNYGNLLLEFSRITPDGVVVFFPS 540
Query: 540 YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRK 599
Y ME + + W+ G + K + VE SQE + L+ Y + G ++
Sbjct: 541 YLYMESIISMWQGMGILDLVWNYKLILVETP-DSQES-SLALETYRTACCNGRGAVLLCV 598
Query: 600 KRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKY-NDTY 658
R K D + + G R I +G+PF + + ++ + Y
Sbjct: 599 ARGKVSEGIDFD--------HHYG-------RAVICIGVPFQYTESRILKARLEFLRENY 643
Query: 659 RSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRK 718
R + N++ A R Q +GR IR + DYG ++L D RFQ + R + KW+ +
Sbjct: 644 R-----IRENDFLSFDAMRHAAQCLGRVIRGKDDYGVMVLADRRFQ--KRRTQLPKWISQ 696
Query: 719 SIKQYD---SFDASLEGLKSFFR 738
++ + + S D ++ KSF +
Sbjct: 697 AMLESETNLSTDMAVATAKSFLK 719
>gi|350584454|ref|XP_003126634.3| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8-like [Sus scrofa]
Length = 693
Score = 135 bits (339), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 173/741 (23%), Positives = 289/741 (39%), Gaps = 208/741 (28%)
Query: 146 IFYASRTHSQISQVISEYKKTAYR--VPMAVLASRKHYCTNKYVR---DKENIDEECKLL 200
I+Y SRTHSQ++Q + E +++ + + L SR++ C N VR + I++ C +
Sbjct: 15 IYYCSRTHSQLAQFVHEVQRSPFGKDTRLVSLGSRQNLCVNDDVRKLGSVQLINDRCVDM 74
Query: 201 LGDRNLGCPQFKNVHKVRGHPSLQKGGC----HE------------VHDIEDLVNVGQVV 244
R G K R Q+ C HE DIE LV +G+
Sbjct: 75 QRSRR-GKKSIAEEAKPRRRKQEQRTACPFYSHERLQLLRDEVLVGAKDIEQLVALGKEA 133
Query: 245 RGCSYYAARSMADDA-------------------------QLVFCPYSYIINPVIRGAME 279
R C YY +R A Q+V ++ + I G
Sbjct: 134 RACPYYGSRFAIPAAQLVVLPYQMVLHAATRQAAGIRLQGQVVLVDEAHNLMDTITGIHS 193
Query: 280 VDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMEL-------------------- 319
V++ G+ L + ++ + R + + +K + L
Sbjct: 194 VEVSGSQLCQAHSQLLQYMERYGKRLKAKNLMYIKQILYLLEKFVAVLGGNVKQNPNTQS 253
Query: 320 -----EQVCSVNPMIYQPLIE---------------MTQDLVGWIERRKATLAK-RE--- 355
++ ++N ++Q I+ +++ L+G+ ER A LA RE
Sbjct: 254 LSQAGTELKTINDFLFQSQIDNINLFKVQRYCEKSMISRKLLGFTERYGAVLASPREQPR 313
Query: 356 ---FQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVI 412
FQHF L+ LQ P + E ++E E+ P + ++
Sbjct: 314 LAGFQHF---------LQSLQ---------PGVTEAPAAPVEE---EEAGAPRPAS-PLM 351
Query: 413 TLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDV 472
+EG ++LT +++G + Q +L + +L LNPAV F V
Sbjct: 352 HIEGFLAALTTA-NQDGRVILSRQGSLSQ--------------SSLKFLLLNPAVHFAQV 396
Query: 473 AELSLSIILTSGTLSPMNSFSSEL----GVQFGTCLE--APHVIDVDLQVLTSVISTGPD 526
+ ++++ GT+ P++ F +L GV+ +E HVI D +L VI +GP
Sbjct: 397 VKECRAVVIAGGTMQPVSDFREQLLACAGVEAERVVEFSCGHVIPPD-NILPLVICSGPA 455
Query: 527 NYPLNASYKTADGYKLMEK-------LCN---------------------RWRETGQWSR 558
N L +Y+ + ++M++ LCN W +G +R
Sbjct: 456 NQQLEFTYQKRELPQMMDETGRILCNLCNVVPGGVVCFFPSYEYQRQVHAHWDRSGLLAR 515
Query: 559 LNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQEN 618
L +K +F EPK +Q E VLK Y S+C +K G Q
Sbjct: 516 LAVRKKIFQEPKRANQ--VEQVLKEY-------SRC-------IKHCG---------QAE 550
Query: 619 ANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKKYNDTY--RSS 661
GA L+V GK ++VG+P+PNI ++ K Y D R+
Sbjct: 551 GMVTGALLLSVVGGKMSEGINFSDSLGRCVVMVGMPYPNIRSAELQEKMAYLDQTLPRAP 610
Query: 662 KNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIK 721
G N +A+NQ+IGR IRH+ D+ +I+LLD+R+ A + W+R ++
Sbjct: 611 GQAAPGKALVENLCMKAVNQSIGRAIRHQKDFASIVLLDQRYARPPILAKLPAWIRDRVE 670
Query: 722 QYDSFDASLEGLKSFFRDVKG 742
+F + L+ F R+ G
Sbjct: 671 VKATFGPAFAALRKFHREKCG 691
>gi|448110971|ref|XP_004201733.1| Piso0_001932 [Millerozyma farinosa CBS 7064]
gi|359464722|emb|CCE88427.1| Piso0_001932 [Millerozyma farinosa CBS 7064]
Length = 824
Score = 135 bits (339), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 165/673 (24%), Positives = 280/673 (41%), Gaps = 136/673 (20%)
Query: 146 IFYASRTHSQISQVISEYKKTAY---------RVPMAVLASRKHYCTN---KYVRDKENI 193
I ++SRTHSQ+SQ + T++ R+ LASRK C + ++ E+I
Sbjct: 199 IIFSSRTHSQLSQFAHQLGLTSFNPTFEGIPERIKFVPLASRKQLCIHPRVSHLTSLESI 258
Query: 194 DEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAAR 253
+E C L + GC F H ++HDIEDL ++G +R C YY+ R
Sbjct: 259 NEACIDLQQNTKEGCT-FNPKHGSTLKKKFSDLSFTKIHDIEDLGSLGTGLRICPYYSVR 317
Query: 254 SMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLL 313
A+++ CPY ++ R + VD+ AI+++DEAHN+ D SV I+ LL
Sbjct: 318 HGLKSAEVIACPYQILLQKSAREMLNVDVDDAIIVIDEAHNLIDTIISLYSVSIN---LL 374
Query: 314 KLQME-----------LEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKRE-----FQ 357
+++M ++++ S N + L+++ Q + +I++ R
Sbjct: 375 EIEMVIKGVKHYLKKFMKKLNSGNRINLMKLLKLCQSIQNFIDKSIYQKEARSGSEVIVS 434
Query: 358 HFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVITLEGL 417
F TGD NI + LE + A K T E E EGL
Sbjct: 435 EIFGDTTGDL-------INIYK--VEKFLEKSKIAYKIDTYMEKE------------EGL 473
Query: 418 FSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGN----WTHT-----LSLWCLNPAVV 468
F++ S S + K++K + NP W T + L+P+ +
Sbjct: 474 ------DFTKKSS--SPLLFKITKFLKCLA-NPSDEGRFFWNVTKDKTAIDYLLLDPSEI 524
Query: 469 FKDVAELSLSIILTSGTLSPMNSFSSEL-------GVQFGTCLEAPHVI-DVDLQVL--- 517
F+D+ +IL GT+ P + F L ++ +C H+I D +L V
Sbjct: 525 FRDIVSKCRCLILCGGTMEPTDDFKKYLFPYVPSQSIKKFSC---DHIIPDKNLIVFPIG 581
Query: 518 ---TSVISTGPD-----NYPLNAS-------YKTADG-------YKLMEKLCNRWRETGQ 555
SV + N LN KT G Y+ + ++ W+ G
Sbjct: 582 KYGNSVFEFSYEKRSDLNMILNLGNAINGICEKTKGGAVVFFPSYRYLNEVKAHWQTHGI 641
Query: 556 WSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIES 615
+ ++ ++ EP + D +L Y SI + A++ +
Sbjct: 642 LRSIENRRTVYYEPTDSA--DVTQILNSYRTSIESDNGLAIL------------FAVVGG 687
Query: 616 QENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKY--------NDTYRSSKNLLSG 667
+ + A LA R I+VG+P+PN + +K++ N + + +K ++
Sbjct: 688 KLSEGINFADDLA--RAVIMVGMPYPNSTSADLIARKEFIEKTVLEENGSVKDAK--IAS 743
Query: 668 NEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDS-- 725
+Y N RA+NQ+IGR IRH+ D I L+D+R+ E ++ +S W++K + +S
Sbjct: 744 KIFYDNLCMRAVNQSIGRSIRHKDDSSLIYLIDQRYGYESVQSKLSGWVKKRLYNKNSCT 803
Query: 726 -FDASLEGLKSFF 737
F+ LE F+
Sbjct: 804 YFNKVLEETTRFY 816
Score = 52.4 bits (124), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 5/56 (8%)
Query: 28 PYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCK 83
P++PY QL M + +D + + ESPTGTGK+LS++CST+ W +N K
Sbjct: 18 PFEPYDIQLELMRSIYDAIDNYKI-----GIFESPTGTGKTLSIICSTMTWLRNNK 68
>gi|401827400|ref|XP_003887792.1| Rad3-like DNA helicase [Encephalitozoon hellem ATCC 50504]
gi|392998799|gb|AFM98811.1| Rad3-like DNA helicase [Encephalitozoon hellem ATCC 50504]
Length = 618
Score = 135 bits (339), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 171/708 (24%), Positives = 284/708 (40%), Gaps = 168/708 (23%)
Query: 48 RAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCKLKNQLANISHSKPDTEAVTDPLAN 107
R DG + SPTGTGK++SLL AV D +
Sbjct: 18 RVVEDGGV-GIFSSPTGTGKTMSLL--------------------------NAVMDYIG- 49
Query: 108 GGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKKMTPTIFYASRTHSQISQVISEYKKTA 167
G G P S+ + + +A T+FY +RTH+Q+SQ ++E K+
Sbjct: 50 GDGAEPGSRSKALEQTLFQGSA--------------GTVFYCTRTHTQLSQAVNELKRLG 95
Query: 168 YRVPMAVLASRKHYCTNKYVRDKENID---EECKLLLGDRNLGCPQFKNVHKVRGHPSLQ 224
R +L SR+ YC N+ V +N D E C+ ++ R C + GH L
Sbjct: 96 VRCNAVILGSRRVYCLNEKVLQHKNSDAMNEGCRQIV--REGLCAFYDGSDLFDGHGIL- 152
Query: 225 KGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKG 284
D+ED +G+ + C YYA++ + +VF PY + R + ++D++G
Sbjct: 153 --------DVEDFGLIGREQKLCPYYASKRYSHRCDIVFLPYQLLFTREGRKSADIDVRG 204
Query: 285 AILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQVCSVNPMIYQPLIEMTQDLVGWI 344
+I+I+DEAHNI D +QM V V Y +E+ ++
Sbjct: 205 SIVIVDEAHNICDSV---------------IQMNTSSVLFVTISRYVKAMELYRE----- 244
Query: 345 ERRKATLAKREFQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELP 404
R + AK GD L + E + F L C + +E SE
Sbjct: 245 --RYSKRAK-----------GDGKLERVMEVLRRIEGFGA-LHCRSVGEEERVVGVSEFL 290
Query: 405 HLSGM---SVITLEGLFSSLTYFFSRNGSHVS-DYQLALQKYIKRDS----KNPGGNWTH 456
+G+ +++ +E +S SR + D L L + K S + G +
Sbjct: 291 LKTGIEDFNMLEIEDYIASSG--ISRKLEGLGRDLNLQLPEISKFLSLLTMSDRSGRIFY 348
Query: 457 T---LSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVD 513
T + L+ ++ F+DV E S++L GT+ P++ +S L + V +
Sbjct: 349 TSRRIKFTPLDASMYFEDVLECR-SLLLAGGTMEPVDQLASVLARRNPMYFSYKSVCN-- 405
Query: 514 LQVLTSVISTGPDNYPLNASYKTADGYKLMEKLC-------NRWRETGQWSRLNAKKPLF 566
L V+ +GP + +Y+T + + ++ + N R+ G L +K
Sbjct: 406 -DFLPIVVPSGPSGREVVVNYETRESLESVKDVASSILNFSNAVRDGGMVCFLPSKA--- 461
Query: 567 VEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASF 626
Y I + + + +KRV E DL + + KKGA
Sbjct: 462 ------------------YLKILREACGDRIGRKRVLYE---DLTDFQEYASEVKKGACI 500
Query: 627 LA----------------VCRGKIVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSGNEW 670
L +CR +VVG+P+PN D+++ + +N GN +
Sbjct: 501 LFAVMGGKLSEGINFSDNLCRLLMVVGVPYPN-QDLELKERIGFN-----------GNGY 548
Query: 671 YCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRK 718
A R +NQ +GR +RH+ DY ++LLD+R+ + IS W+R+
Sbjct: 549 TTMLAMRVVNQTLGRALRHKNDYAVLVLLDKRYIQLSK--LISSWVRE 594
>gi|330930952|ref|XP_003303208.1| hypothetical protein PTT_15338 [Pyrenophora teres f. teres 0-1]
gi|311320914|gb|EFQ88691.1| hypothetical protein PTT_15338 [Pyrenophora teres f. teres 0-1]
Length = 865
Score = 135 bits (339), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 160/714 (22%), Positives = 280/714 (39%), Gaps = 168/714 (23%)
Query: 146 IFYASRTHSQISQVISEYKKTAYRVPMAV----------------------LASRKHYCT 183
IF+ SRTHSQ++Q SE + ++P A+ L SRK+ C
Sbjct: 202 IFFCSRTHSQLTQFSSELGRV--KMPPAIAPDDAENGGGAKSLVEDVKHLTLGSRKNLCI 259
Query: 184 NKYVR---DKENIDEECKLLLGDRNLG---CPQFKN------VHKVRGHPSLQKGGCHEV 231
N V I+E+C L L ++ CP ++ R H ++
Sbjct: 260 NSKVNRLGSATAINEQC-LELQQSSVAETRCPHMPTKESEPLINDFRDH------ALAKI 312
Query: 232 HDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDE 291
DIEDL ++G+ + C YYA+R ++V PY ++ R A+ + +K I+I+DE
Sbjct: 313 RDIEDLGSLGKKLGVCPYYASRPATKYCEIVTLPYPLLLQRSAREALGISLKDHIVIIDE 372
Query: 292 AHNIEDIARDAGSVDIDED--------VLLKLQMELEQVCSVNPMIYQPLIEMTQDLVGW 343
AHN+ D SV + + + + LQ ++ N + + + +VG+
Sbjct: 373 AHNLMDAIAGIYSVSVTLEQVQQARTQLTVYLQKFRNKLKGKNRVYVAQTVRILDSIVGY 432
Query: 344 IERRKATLAKRE-FQHFFSCWTGD--------KALRELQEANISRQCFPILLECATKAIK 394
++ + S +G K LQE+ ++R+ ++ T ++
Sbjct: 433 LQTIHDKPGMSDGLVDMVSIMSGKGVDQINIYKLNTYLQESRLARK-----VDGYTAYVE 487
Query: 395 EATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQ------KYIKRDSK 448
E T+ ++ ++ + +G ++ HV + L+L ++ +
Sbjct: 488 ETTNEKA----MTSTKQVGKKGPRHNVPVLM-----HVQAFLLSLMNPSTEGRFFYSREE 538
Query: 449 NPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSEL------------ 496
+ G TL L+P FK++ E + ++IL GT+SPM+ + L
Sbjct: 539 DTG----MTLRYMLLDPTFHFKEIVEEARAVILAGGTMSPMSDYEQHLLSYLEPSKIMTL 594
Query: 497 ---------------------GVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYK 535
GV+F E + + + T++ LN S
Sbjct: 595 SCGHVIPPSNLLAVPVMRTSGGVEFDFTFENRNKEKTMIDLGTAI---------LNFSQH 645
Query: 536 TADG-------YKLMEKLCNRWRETGQ-------WSRLNAKKPLFVEPKGGSQEDFEI-- 579
DG Y ++ W+ Q W KP+F+E + Q ++
Sbjct: 646 IPDGVVVFFPSYSYLDTCVAAWKRIKQSASKATFWDNFTQSKPVFLEQRSQQQASDQVPA 705
Query: 580 --------VLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCR 631
VL Y +I+ G+ + + + +N + A+ R
Sbjct: 706 SKDVAVASVLSTYSAAIASGNGRGALLFAVIGGTLSEGINFSD-------------ALGR 752
Query: 632 GKIVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSGN----EWYCNQAFRALNQAIGRCI 687
G +VVG+PFPN + K +Y +++KN G ++Y N RA+NQ +GR I
Sbjct: 753 GVVVVGLPFPNAQSAEWKAKMQYI-AAKTAKNGGDGKAAARDFYENACMRAVNQCVGRAI 811
Query: 688 RHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFRDVK 741
RH+ DY AI++LD R+ R + + KW+R S+ L FF D K
Sbjct: 812 RHKGDYAAILMLDRRYAGRRIQDKLPKWIRASLTTGLGVRDVEGRLDEFFMDKK 865
Score = 48.5 bits (114), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 36/63 (57%), Gaps = 7/63 (11%)
Query: 23 IQVEF--PYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQ 80
+Q +F PY PY Q FM V L+ + + ESPTGTGKSLSL+C +L W +
Sbjct: 6 LQQDFHHPYTPYDIQNEFMGAVYKCLEDRKV-----GIFESPTGTGKSLSLICGSLTWLR 60
Query: 81 NCK 83
+ K
Sbjct: 61 DHK 63
>gi|302818654|ref|XP_002991000.1| hypothetical protein SELMODRAFT_132642 [Selaginella moellendorffii]
gi|300141331|gb|EFJ08044.1| hypothetical protein SELMODRAFT_132642 [Selaginella moellendorffii]
Length = 834
Score = 134 bits (338), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 159/684 (23%), Positives = 276/684 (40%), Gaps = 146/684 (21%)
Query: 146 IFYASRTHSQISQVISEYKKTAYRVPMAVLA--SRKHYCTNKYVR---DKENIDEECKLL 200
IF+ SRTHSQ+SQ I E K+T++ + +A SRK C N+ V I++ C L
Sbjct: 165 IFFCSRTHSQLSQFIRELKRTSFSTSLKTIALGSRKTLCVNQDVLKLGSASRINDRCLDL 224
Query: 201 ----------LGDRNLGCPQFKNVH-------------KVRGHPSLQKGG---------- 227
+ RN P F + H K P L+K
Sbjct: 225 QKKKKSSSQKVSTRN--SPSFVSHHNFFQVDDQRVIKSKTSACPFLKKQRQRKQFKEAVV 282
Query: 228 CHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAIL 287
+ DIEDLV++GQ + C YY +R+ AQ+V PY +++ R ++ +++K +++
Sbjct: 283 ASQPMDIEDLVHLGQKLGSCPYYGSRNSLPMAQVVVLPYQSLLHAATRESLGINLKDSVV 342
Query: 288 ILDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQVCS--------VNPMIYQPLIEMTQD 339
I DEAHN+ D + S + L ++ +L + S N Q L+ + Q
Sbjct: 343 IFDEAHNLVDTVTNTYSSQLSTLQLRQVSSQLSEYLSRFRTRLAPANRRYIQTLLVLVQA 402
Query: 340 LVGWIERRKATLAKREFQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDT 399
L+ R ++ RE + A+ + + S I L + IKE+
Sbjct: 403 LL----ERLMSVGSREKEPGVQDVQTPAAITTINDFVFSLGIDNINLFKLCRYIKESNIV 458
Query: 400 -------ESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGG 452
+ L + +S + G F +L F + SD ++ + +
Sbjct: 459 NKVSGYGDKYLSQQNELSPSSTAG-FHALAAFLVSLTTAQSDGRVLIVE---------SS 508
Query: 453 NWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQ-------FGTCLE 505
+ L+ A F +V + + ++IL GTL P+ L Q F +C
Sbjct: 509 DGECMFKFLMLDAAKHFSEVVQQARTVILAGGTLQPVAEMRDRLLFQVPDESLHFFSC-- 566
Query: 506 APHVIDVDLQVLTSVISTGPDNYPLNASYKTADGYKLMEKLCNR---------------- 549
H++ + +L I+ GP + +Y++ +++E+L
Sbjct: 567 -GHIVPGE-SILPLAIAKGPSGKTFDFTYQSRSSPQMIEELGRLLVNISVIVPEGIVVFF 624
Query: 550 ------------WRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVV 597
W ++G S + KK +F EP+ S E VL+ Y SI+ G +
Sbjct: 625 PSFEYESQVHKCWDKSGILSSILKKKNIFREPRNASA--VEAVLQEYKTSITTGGGALL- 681
Query: 598 RKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYNDT 657
L+ + + + + + C ++VG+P+P+ D ++ K KY D
Sbjct: 682 ------------LSVVGGKMSEGINFSDGMGRC--VVMVGLPYPSSRDPELLEKIKYIDE 727
Query: 658 YRSSKNLLS--------------------GNEWYCNQAFRALNQAIGRCIRHRFDYGAII 697
++KN G ++Y N +A+NQ+IGR IRH DY AI+
Sbjct: 728 LNNTKNRKESSSPPSQQRTGFTLQQCGHRGRDYYENLCIKAVNQSIGRAIRHAKDYAAIL 787
Query: 698 LLDERFQEERN-RAHISKWLRKSI 720
LLD R+ A + +W+++ +
Sbjct: 788 LLDGRYVTTGGPAAKLPEWIKEHL 811
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 35/55 (63%), Gaps = 5/55 (9%)
Query: 27 FPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQN 81
FP+QPY QL M V L++ A++ESPTGTGK+LSL+CS L W ++
Sbjct: 9 FPFQPYAIQLQLMRAVYGALEKGGV-----AIVESPTGTGKTLSLICSVLQWLED 58
>gi|255710557|ref|XP_002551562.1| KLTH0A02376p [Lachancea thermotolerans]
gi|238932939|emb|CAR21120.1| KLTH0A02376p [Lachancea thermotolerans CBS 6340]
Length = 821
Score = 134 bits (337), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 153/658 (23%), Positives = 267/658 (40%), Gaps = 135/658 (20%)
Query: 146 IFYASRTHSQISQVISEYKKTAY----------RVPMAVLASRKHYCTNKYVRDKEN--I 193
IFYASRTHSQ+ Q+ S+ + + RV LASRK C N V + I
Sbjct: 213 IFYASRTHSQLGQLASQLRLPNFPPSFESMEHERVKFVPLASRKQLCINPKVSKTSSQVI 272
Query: 194 DEECKLLLGDRNLGCPQFKN------VHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGC 247
++ C+ + + C + +H R H + +HDIED+V++G+ C
Sbjct: 273 NDYCRDAVSKKE--CVPYTRSKDPEILHAFRDH------AFYAIHDIEDMVSLGRATSTC 324
Query: 248 SYYAARSMADDA-QLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVD 306
YYA R + D ++V PY +++ R A+ VD+K +I+I+DEAHN+ D S +
Sbjct: 325 PYYALRELLHDGVEVVTLPYQHLLVESTREALGVDLKDSIVIIDEAHNLIDTINAVNSAE 384
Query: 307 IDEDVLLKLQMEL--------EQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQH 358
+ L ++ + +++ N + + L+ + + L+ ++++ + E
Sbjct: 385 VSLADLQSSKLGITMYENKFAKRLSPHNRVNLKRLLTLVEVLIVFLQQNYKNGKEFESHE 444
Query: 359 FFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTES---------ELPHLSGM 409
F D E + ++ K+ E+ +T + L +
Sbjct: 445 VFEGTNADVLNIHKLEQYMKTTKIAYKIDSYIKSQNESAETAAVERQPVLFKVASFLKTL 504
Query: 410 SVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVF 469
S +LEG F FF + + KY+ L P+ F
Sbjct: 505 SNPSLEGQF-----FFEKG---------KVMKYM------------------LLEPSNSF 532
Query: 470 KDVAELSLSIILTSGTLSPMNSFSSELGVQFG-----TCLEAPHVIDVDLQVLTSVISTG 524
K + + ++L GT+ P++ F+ +L + F HVI D + T +++ G
Sbjct: 533 KSIVHAARCVLLAGGTMEPISDFTRDL-IPFVDENQINKFACNHVIP-DNNLNTFIVTEG 590
Query: 525 --------PDNYPLNASYK--------TADG-------YKLMEKLCNRWRETGQWSRLNA 561
D+ L+ Y DG YK +E L W T +
Sbjct: 591 FEFTYDKREDSRTLSDLYDFFSRLVKIVPDGVVVFLPSYKFLESLMRFWNSTCKVGACIG 650
Query: 562 KKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANK 621
K +F E + D ++ G+ V R+ EG N N +
Sbjct: 651 NKKIFYE--SADKADVFAKYAEEVRKLTGGAILFAVVGGRLS-EGINFQNEL-------- 699
Query: 622 KGASFLAVCRGKIVVGIPFPNINDIQVSLKKKY--------NDTYRSSKNLLSGNEWYCN 673
R ++VG+P+PN+ ++ +K+K+ N + + +K + E+Y N
Sbjct: 700 --------ARAVVMVGLPYPNLFSGELIIKRKHLEQKVLKANGSSQDAKR--ATREFYEN 749
Query: 674 QAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLE 731
+A+NQ+IGR IRH DY I L+D+R+ + + +S W+ K I+ S D E
Sbjct: 750 ICMKAVNQSIGRAIRHAQDYANIYLVDKRYSSIQVQTKLSNWVAKRIRHTTSLDDLFE 807
Score = 56.6 bits (135), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%), Gaps = 4/56 (7%)
Query: 28 PYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCK 83
P+QPY QL M +V +TL+ ++ G + ESPTGTGK+LSL+C T+ W + K
Sbjct: 10 PFQPYDIQLQLMHQVYNTLESGKKIG----IFESPTGTGKTLSLICPTVTWLRRNK 61
>gi|145240349|ref|XP_001392821.1| DNA repair helicase rad15 [Aspergillus niger CBS 513.88]
gi|134077338|emb|CAK39953.1| unnamed protein product [Aspergillus niger]
Length = 801
Score = 134 bits (337), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 183/803 (22%), Positives = 324/803 (40%), Gaps = 168/803 (20%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+ + + V FPY + Y Q +MC + TLD GHC +LE P+GTGK++SLL +
Sbjct: 3 FFIDDLPVLFPYPRIYPEQYAYMCDLKKTLDAG---GHC--VLEMPSGTGKTVSLLSLIV 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNK 136
A+QQ+ +L S + + E L F + T G T++ K
Sbjct: 58 AYQQHYPEHRKLIYCSRTMSEIEKALAELKALMKFRAKELGYTEDFRALGLTSR-----K 112
Query: 137 NVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE 196
N+ + P++ R S AV+ +R T +V++K+ E+
Sbjct: 113 NLC--LHPSV---KREKSG-----------------AVVDARCRSLTAGFVKEKKERGED 150
Query: 197 CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMA 256
+L C +N+ + H + G V ++ L+ G+ + C Y++AR M
Sbjct: 151 VEL--------CVYHENLDLLEPHNLVPPG----VFTLDGLLKYGEEHKQCPYFSARRMM 198
Query: 257 DDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLKL 315
++ Y Y+++P I + ++ K I++ DEAHNI+++ ++ S+D+ ED L K
Sbjct: 199 PFCNVIIYSYHYLLDPKIAERVSRELSKDCIVVFDEAHNIDNVCIESLSIDLTEDSLRKA 258
Query: 316 QM---ELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFS-CWTGDKALRE 371
LE+ +N M ++ + +E +A RE F S D L+E
Sbjct: 259 TRGANNLER--KINEMKTSDAEKLQNEYSKLVEGLQAAEQAREEDQFISNPVLPDDLLKE 316
Query: 372 LQEANISR--------QCFPILLECATKAIKEATDTE-SELPHLSGMSVI---------- 412
NI R + F L+ K + ++T S L H+ ++ I
Sbjct: 317 AVPGNIRRAEHFVSFLKRFIEYLKTRMKVMHTISETPPSFLTHVKDLTYIERKPLRFCAE 376
Query: 413 -------TLEGL-------FSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTL 458
TLE + + F + ++ + L L+ + + P L
Sbjct: 377 RLTSLVRTLELINIEDYQPLQEVATFATLVATYEKGFLLILEPFESEAATVPNP----VL 432
Query: 459 SLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQ-VL 517
CL+ A+ K V E S+I+TSGTLSP+ + LG F ++ + + + + L
Sbjct: 433 HFTCLDAAIAIKPVFERFSSVIITSGTLSPLEMYPKMLG--FNAVMQESYSMTLARRSFL 490
Query: 518 TSVISTGPDNYPLNASYK---------------------TADG-------YKLMEKLCNR 549
+++ G D +++S++ T DG Y ME + +
Sbjct: 491 PMIVTRGSDQAQISSSFQIRNDPGVVRNYGNLVLEFSRITPDGVVVFFPSYLYMESIISM 550
Query: 550 WRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNND 609
W+ G + K + VE + + L+ Y + G
Sbjct: 551 WQGMGILDSIWNYKLILVETPDAQESS--LALETYRTACCNG------------------ 590
Query: 610 LNTIESQENANKKGASFLAVCRGKIVVGIPFPN-----INDIQVSLKKKYNDTYRSSKNL 664
+GA L V RGK+ GI F + + +I V + + ++
Sbjct: 591 ------------RGALLLCVARGKVSEGIDFDHHYGRAVINIGVPFQYTESRILKARLEF 638
Query: 665 L------SGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRK 718
L N++ A R Q +GR +R + DYG ++L D RFQ++RN+ + KW+ +
Sbjct: 639 LRENYRIRENDFLSFDAMRHAAQCLGRVLRGKDDYGVMVLADRRFQKKRNQ--LPKWINQ 696
Query: 719 SIKQYD---SFDASLEGLKSFFR 738
++ + + S D + K+F R
Sbjct: 697 AMLESETNLSTDMAAATAKNFLR 719
>gi|68472519|ref|XP_719578.1| hypothetical protein CaO19.9551 [Candida albicans SC5314]
gi|68472770|ref|XP_719450.1| hypothetical protein CaO19.2000 [Candida albicans SC5314]
gi|74586763|sp|Q5AD67.1|CHL1_CANAL RecName: Full=ATP-dependent RNA helicase CHL1; AltName:
Full=Chromosome loss protein 1
gi|46441268|gb|EAL00566.1| hypothetical protein CaO19.2000 [Candida albicans SC5314]
gi|46441401|gb|EAL00698.1| hypothetical protein CaO19.9551 [Candida albicans SC5314]
Length = 842
Score = 134 bits (337), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 161/647 (24%), Positives = 273/647 (42%), Gaps = 110/647 (17%)
Query: 146 IFYASRTHSQISQVISEYKKTAY---------RVPMAVLASRKHYCTNKYVRDKEN---I 193
IF++SRTHSQ++Q S+ + T + R L SRK C N+ VR K N +
Sbjct: 203 IFFSSRTHSQLNQFSSQLRLTNFQASFEDLEERTKYIPLGSRKQLCINEKVRSKGNDQSV 262
Query: 194 DEECKLLLGDRNLGCPQF-KNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAA 252
++ C L + N GC KN ++ DIEDL +G + C YY+
Sbjct: 263 NDACLDLQRETN-GCQYLPKNYMMSSVTKEFADLSLAKIRDIEDLNELGIELNICPYYSV 321
Query: 253 RSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVL 312
R + +++ PY I R + +DIK +I+I+DEAHNI D+ S+ I D L
Sbjct: 322 RKGIEMTEIISLPYQMIFQDTTRKILNLDIKDSIIIIDEAHNIIDVITSMYSIKITSDQL 381
Query: 313 ------LKLQME--LEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLA---KREFQHFFS 361
LK+ + L+++ S N + LI++ Q L+ ++ + + + Q F
Sbjct: 382 NKVIKSLKIYLNKFLKRLNSGNRINLMKLIKICQILLKFLNTNSEKVKSGDEVQIQDIFK 441
Query: 362 CWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMS----------- 410
TGD + +++ +E + + TD + ++
Sbjct: 442 DSTGDLVNIHKLDQFLTKSKIAYKIESYIEKTEMETDNGEKKGRITNSGGSSSSSSSSNP 501
Query: 411 -VITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVF 469
+ T+ +LT S+ G D + N T +L+ L+P+ VF
Sbjct: 502 LLFTIIKFLRTLTN-LSKEGKFFWDNE----------------NGTISLNYMLLDPSAVF 544
Query: 470 KDVAELSLSIILTSGTLSPMNSFSSELGVQFGT----CLEAPHVI-DVDLQVLTSVISTG 524
K++ + + ++L GT+ PM+ + L T HVI +LQV IS
Sbjct: 545 KEIVDQAKCVLLCGGTMEPMSDYMDYLFPSVPTNKINTFACGHVIPKENLQVFP--ISQW 602
Query: 525 PDN--------------------YPLNASYKTADG-------YKLMEKLCNRWRETGQWS 557
D + + + + G YK ++++ WR+T +
Sbjct: 603 NDTNFEFSYQKRNDSKQLMALGEFLIEITKRVPYGVVIFFPSYKYLDQVLQFWRDTKILT 662
Query: 558 RLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQE 617
+ ++K +F EPK S + E VL Y I K A++ + + +
Sbjct: 663 SIESEKTIFREPKDPS--NVEKVLNEYGYLIQTERKGAIL------------FSVVGGKM 708
Query: 618 NANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSGN------EWY 671
+ + LA R I+VG+P+PN ++ K+KY +T S + + +Y
Sbjct: 709 SEGINFSDDLA--RAVIMVGLPYPNAYSGEMVTKRKYIETSELSNGGTTTDAKEKSRNYY 766
Query: 672 CNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRK 718
N RA+NQ+IGR IRH DY I L+D RF R + +S+W+++
Sbjct: 767 ENLCMRAVNQSIGRSIRHINDYSIIYLVDRRFSTPRIQNKLSQWVKE 813
Score = 55.1 bits (131), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 28 PYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCKLKNQ 87
PY PY Q+ M + +T++ +G+ L ESPTGTGK+LS++CS++ W + K N
Sbjct: 13 PYTPYDIQIQLMDAIYNTIE----NGYKIGLFESPTGTGKTLSIICSSMTWLRTFKRNNT 68
Query: 88 LANISHSKPDT 98
++ D
Sbjct: 69 FLETNNEVEDV 79
>gi|238489069|ref|XP_002375772.1| TFIIH complex helicase Rad3, putative [Aspergillus flavus NRRL3357]
gi|220698160|gb|EED54500.1| TFIIH complex helicase Rad3, putative [Aspergillus flavus NRRL3357]
gi|391869618|gb|EIT78813.1| RNA polymerase II transcription initiation [Aspergillus oryzae
3.042]
Length = 794
Score = 134 bits (336), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 181/794 (22%), Positives = 326/794 (41%), Gaps = 150/794 (18%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+ + + V FPY + Y Q +MC + TLD GHC +LE P+GTGK++SLL +
Sbjct: 3 FFIDDLPVLFPYPRIYPEQYAYMCDLKKTLDAG---GHC--VLEMPSGTGKTVSLLSLIV 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAM-NN 135
A+Q + +L S + + E L F + T G T++ + +
Sbjct: 58 AYQMHYPEHRKLIYCSRTMSEIEKALAELKALMKFRTQQLGYTEDFRALGLTSRKNLCLH 117
Query: 136 KNVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDE 195
+VK++ + TI + +R T +V++K+ E
Sbjct: 118 PSVKREKSGTI----------------------------VDARCRSLTAGFVKEKKERGE 149
Query: 196 ECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSM 255
+ +L C +N+ + H + G V ++ L+ G+ + C Y++AR M
Sbjct: 150 DVEL--------CVYHENLDLLEPHNLVPPG----VFTLDGLLKYGEDHKQCPYFSARRM 197
Query: 256 ADDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLK 314
++ Y Y+++P I + + K I++ DEAHNI+++ ++ S+DI ED L K
Sbjct: 198 MPFCNVIIYSYHYLLDPKIAERVSREFSKDCIVVFDEAHNIDNVCIESLSIDITEDSLRK 257
Query: 315 LQM---ELEQVCSVNPMIYQPLIEMTQDLVGWIE-RRKATLAKREFQHFFSCWTGDKALR 370
LE+ +N M ++ + +E R+A A+ E Q + D L+
Sbjct: 258 ATRGANNLER--KINEMKSSDAEKLQSEYSKLVEGLREAEQAREEDQFISNPVLPDDLLK 315
Query: 371 ELQEANISR-QCFPILLECATKAIK---EATDTESELP-----HLSGMSVI--------- 412
E NI R + F L+ + +K + T T SE P H+ ++ I
Sbjct: 316 EAVPGNIRRAEHFISFLKRFIEYLKTRMKVTHTISETPPSFLTHVKDLTYIERKPLRFCA 375
Query: 413 --------TLEGL-------FSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHT 457
TLE + + F + ++ + L L+ + + P
Sbjct: 376 ERLTSLVRTLELINIEDYQPLQEVATFATLVSTYDKGFLLILEPFESEAATVPNP----V 431
Query: 458 LSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQ-V 516
L CL+ A+ K V E S+I+TSGTLSP+ + LG F T ++ + + + +
Sbjct: 432 LHFTCLDAAIAIKPVFERFSSVIITSGTLSPLEMYPKMLG--FTTVMQESYSMTLARRSF 489
Query: 517 LTSVISTGPDNYPLNASYK---------------------TADG-------YKLMEKLCN 548
L V++ G D +++S++ T DG Y ME + +
Sbjct: 490 LPMVVTRGSDQAQISSSFQIRNDPGVVRNYGNIVLEFSRITPDGIVVFFPSYLYMESIIS 549
Query: 549 RWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNN 608
W+ G + K + VE + + L+ Y + G ++ R K
Sbjct: 550 MWQGMGILDSIWNYKLILVETPDAQESS--LALETYRTACCNGRGAILMCVARGKVSEGI 607
Query: 609 DLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKY-NDTYRSSKNLLSG 667
D + + G R I +G+PF + + ++ + YR +
Sbjct: 608 DFD--------HHYG-------RAVICIGVPFQYTESRILKARLEFLRENYR-----IRE 647
Query: 668 NEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYD--- 724
N++ A R Q +GR +R + DYG ++L D+RFQ + R + KW+ +++ + +
Sbjct: 648 NDFLSFDAMRHAAQCLGRVLRGKDDYGVMVLADKRFQ--KKRTQLPKWISQAMLESETNL 705
Query: 725 SFDASLEGLKSFFR 738
S D ++ K+F R
Sbjct: 706 STDMAVATAKNFLR 719
>gi|308161158|gb|EFO63616.1| TFIIH basal transcription factor complex helicase subunit [Giardia
lamblia P15]
Length = 1060
Score = 134 bits (336), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 98/355 (27%), Positives = 165/355 (46%), Gaps = 62/355 (17%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ G+ FP++PY SQ+ +M +I+ L++ + +ALLESPTGTGK+LSLL +A+Q
Sbjct: 7 IEGVHFRFPFEPYPSQMKYMSSLITALNKKE-----NALLESPTGTGKTLSLLIPAIAYQ 61
Query: 80 QNCK--LKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPP--------------- 122
+ C L + + KPDT + G F+ S +PP
Sbjct: 62 EQCINFLSLVTSLLKKCKPDTNIS----ESAGAFVLSSNALPMPPDADKLLEWTDQTLGF 117
Query: 123 ----STNGQTAQVAMNN--KNVKKKMTPTIFYASRTHSQISQVISEYK------------ 164
+ N + + +N+ + + +++ P I YA+RTH+QI Q I + K
Sbjct: 118 RDSVTVNSKLKIIRLNDTTRRIAEQLPPKILYAARTHAQIEQAIRQLKNYSTTISGASGN 177
Query: 165 -KTAYRVPMAVLASRKHYCTNKYVRDKE-----NIDEECKLLLGDRNLGCPQFKN----- 213
K++ P+A+L SR+ +C N+ + CK + DR C + N
Sbjct: 178 DKSSLFWPIAMLGSRRIFCINERAHTYAAAANITLSMACKKICDDRQ--CRYYSNDRDND 235
Query: 214 --VHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIIN 271
K R + G + D+ED + C YY R++ A+++ PY+YI++
Sbjct: 236 NLAQKYREYYCENSNG--RLDDLEDFFGYCKKESRCPYYLGRALVPQARVITAPYNYILS 293
Query: 272 PVIRGA-MEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQVCSV 325
R + + ++ +IL++DE HNI DA S + D LLK E++ + V
Sbjct: 294 SKSRTSELSSMLRNSILLVDEGHNIGQACCDAFSGSVTIDALLKASEEIQHLQKV 348
Score = 122 bits (306), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 137/290 (47%), Gaps = 54/290 (18%)
Query: 460 LWCLNPAVVFKDV--AELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVI---DVDL 514
L C+ P + K + E S++LTSGTL+P ++ +ELG+ F + PH++ + L
Sbjct: 613 LLCMTPKSILKTIMIGEGVHSLVLTSGTLAPFSALQAELGLPFNISVSCPHIVSPSNYLL 672
Query: 515 QVLTSVIST---GPDNYPLNASYKTADGYKL--------------------MEKLCNRWR 551
+ +T+V T G + SY+ GY L M ++ + W+
Sbjct: 673 RAITAVTGTPLLGTYTNRESKSYQRCLGYALQTCVRGVVGGTLVFFSSYKYMIQVLDSWK 732
Query: 552 ETGQWSRLNAK-----KPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREG 606
G + L + + LFVEP Q D V++ Y +S G + R K
Sbjct: 733 ADGTEAELKSDAHGDPRDLFVEPV--RQHDCNAVIRKYKDSCDAGRSPILFVICRGKLAE 790
Query: 607 NNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLS 666
D + CR +V+ +P+PNI+D + +K + D + ++L
Sbjct: 791 GIDFSN---------------NYCRCALVISLPYPNISDPLLKIKMDWLDKH----SVLK 831
Query: 667 GNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWL 716
G++WY A+R +NQA+GR +RH+ DYG + LLD+R+ E NR +S+WL
Sbjct: 832 GSDWYSVHAYRTVNQALGRVLRHKDDYGCMFLLDQRYSVEINRKQLSEWL 881
>gi|332232619|ref|XP_003265501.1| PREDICTED: probable ATP-dependent RNA helicase DDX11 isoform 2
[Nomascus leucogenys]
Length = 856
Score = 134 bits (336), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 168/712 (23%), Positives = 275/712 (38%), Gaps = 207/712 (29%)
Query: 146 IFYASRTHSQISQVISEYKKTAY--RVPMAVLASRKHYCTNKYVRD---KENIDEECKLL 200
I+Y SRTHSQ++Q + E KK+ + V + L SR++ C N+ V+ + I++ C +
Sbjct: 229 IYYCSRTHSQLAQFVHEVKKSPFGKDVRLVSLGSRQNLCVNEDVKSLGSVQLINDRCVDM 288
Query: 201 LGDRNL-------------------GCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVG 241
R+ CP F N H+ G L+ +V DIE L+ +G
Sbjct: 289 QRSRHEKKKGAEEEKPKRRRQEKQAACP-FYN-HEQMG--LLRDEALADVKDIEQLLALG 344
Query: 242 QVVRGCSYYAARSMADDAQLVFCPYSYIINPV-------------------------IRG 276
+ R C YY +R AQLV PY +++ I G
Sbjct: 345 KEARACPYYGSRLAIPAAQLVVLPYQMLLHAATRQAAGIRLQDQVVIIDEAHNLIDTITG 404
Query: 277 AMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMEL----------------- 319
V++ G+ L + ++ + R + + LK + L
Sbjct: 405 MHSVEVSGSQLCQAHSQLLQYMERYGKRLKAKNLMYLKQILYLLEKFVAVLGGNIKQNPN 464
Query: 320 --------EQVCSVNPMIYQPLIE---------------MTQDLVGWIERRKATLAKRE- 355
++ ++N ++Q I+ +++ L G+ ER A L+ RE
Sbjct: 465 TQSLSQTGTELKTINDFLFQSQIDNINLFKVQRYCEKSMISRKLFGFTERYGAVLSSREQ 524
Query: 356 -----FQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMS 410
FQ F L+ LQ P A ++++ P +
Sbjct: 525 PKLAGFQQF---------LQSLQPRTTEALAAP------------ADESQASAPRPAS-P 562
Query: 411 VITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFK 470
++ +EG ++LT +++G + Q +L + TL LNPAV F
Sbjct: 563 LMHIEGFLAALTTA-NQDGRVILSRQGSLSQ--------------STLKFLLLNPAVHFA 607
Query: 471 DVAELSLSIILTSGTLSPMNSFSSEL----GVQFGTCLE--APHVIDVDLQVLTSVISTG 524
V + ++++ GT+ P++ F +L GV+ +E HVI D +L VI +G
Sbjct: 608 QVVKECRAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHVIPPD-NILPLVICSG 666
Query: 525 PDNYPLNASYKTADGYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHY 584
N PL +++ RE Q +F EPK Q E VL Y
Sbjct: 667 ISNQPLEFTFQK--------------RELPQM--------IFQEPKSAHQ--VEQVLLAY 702
Query: 585 YNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGK----------- 633
I QG C QE GA L+V GK
Sbjct: 703 SRCI-QG--CG--------------------QERGRVTGALLLSVVGGKMSEGINFSDNL 739
Query: 634 ----IVVGIPFPNINDIQVSLKKKYNDTY--RSSKNLLSGNEWYCNQAFRALNQAIGRCI 687
++VG+PFPNI ++ K Y D R+ G N +A+NQ+IGR I
Sbjct: 740 GRCVVMVGMPFPNIRSPELQEKMAYLDQTLPRAPGQAPPGKALVENLCMKAVNQSIGRAI 799
Query: 688 RHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFRD 739
RH+ D+ +I+LLD+R+ A + W+R + +F ++ ++ F R+
Sbjct: 800 RHQKDFASIVLLDQRYARPPVLAKLPAWIRARVDVKSTFGPAIAAVQKFHRE 851
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 40/68 (58%), Gaps = 5/68 (7%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
VG I FP+ PY Q FM + L+ A + G + ESPTGTGKSLSL+C L+W
Sbjct: 8 VGAIHFPFPFTPYSIQEDFMAELYRVLE-AGKIG----IFESPTGTGKSLSLICGALSWL 62
Query: 80 QNCKLKNQ 87
++ + K +
Sbjct: 63 RDFEQKKR 70
>gi|448096961|ref|XP_004198556.1| Piso0_001932 [Millerozyma farinosa CBS 7064]
gi|359379978|emb|CCE82219.1| Piso0_001932 [Millerozyma farinosa CBS 7064]
Length = 824
Score = 133 bits (335), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 163/672 (24%), Positives = 279/672 (41%), Gaps = 134/672 (19%)
Query: 146 IFYASRTHSQISQVISEYKKTAY---------RVPMAVLASRKHYCTN---KYVRDKENI 193
I ++SRTHSQ+SQ + T + R+ LASRK C + ++ ++I
Sbjct: 199 IIFSSRTHSQLSQFAHQLGLTNFNPTFEGIPERIKFVPLASRKQLCIHPRISHLTSLDSI 258
Query: 194 DEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAAR 253
+E C L + GC F H ++HDIEDL ++G +R C YY+ R
Sbjct: 259 NEACIDLQQNTKEGCA-FNPKHGSMSKKKFSDLSFTKIHDIEDLGSLGTGLRVCPYYSVR 317
Query: 254 SMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLL 313
+ A+++ PY ++ R + VD++ AI+++DEAHN+ D SV I+ LL
Sbjct: 318 NGLKSAEVIASPYQILLQKSARETLNVDVEDAIIVIDEAHNLIDTIISLYSVSIN---LL 374
Query: 314 KLQM-----------ELEQVCSVNPMIYQPLIEMTQDLVGWIER---RKATLAKREFQ-- 357
+++M ++++ S N + L+++ Q + +I + RK + E
Sbjct: 375 EIEMIIKGIRYYLRKFMKKLNSGNRINLMKLLKLCQSIQNFINKSIDRKESHNGSEVMVN 434
Query: 358 HFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVITLEGL 417
F TGD NI + LE + A K T E E EGL
Sbjct: 435 EIFGDTTGDL-------INIYK--VEKFLEKSKIAYKIDTYMEKE------------EGL 473
Query: 418 FSSLTYFFSRNGSHVSDYQLALQKYIK--RDSKNPGG-NWTHT-----LSLWCLNPAVVF 469
F ++ S + + K++K + N G W T + L+P+ +F
Sbjct: 474 -----TFIKKSSSPL---LFKITKFLKCLANPSNEGKFFWNVTKDKTAIDYLLLDPSEIF 525
Query: 470 KDVAELSLSIILTSGTLSPMNSFSSEL-------GVQFGTCLEAPHVI-DVDLQVLT--- 518
+D+ +IL GT+ PM + L ++ +C H+I D +L V
Sbjct: 526 RDIVSKCRCLILCGGTMEPMEDYKKYLFPYVPNESIKKFSC---DHIIPDKNLIVFPIGT 582
Query: 519 --------SVISTGPDNYPLNAS-------YKTADG-------YKLMEKLCNRWRETGQW 556
S G N LN T G Y+ + ++ +WR G
Sbjct: 583 YGNSVFEFSYEKRGDLNMILNLGNVITQICENTKGGAVVFFPSYRYLNEVKAQWRIHGIL 642
Query: 557 SRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQ 616
+ ++ ++ EP + D +L Y SI + A++ + +
Sbjct: 643 RSIEDRRTVYYEPIDSA--DVAQILNSYRTSIESDNGLAII------------FAVVGGK 688
Query: 617 ENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKY--------NDTYRSSKNLLSGN 668
+ A LA R I+VG+P+PN+ + +K++ N + ++ +
Sbjct: 689 LSEGINFADDLA--RAVIMVGMPYPNVTSADLIARKEFIEKTILEENGNVKDART--ASK 744
Query: 669 EWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDS--- 725
+Y N RA+NQ+IGR IRH+ D I L+D+R+ E ++ +S W++K + S
Sbjct: 745 TFYDNLCMRAVNQSIGRSIRHKDDSSLIYLIDQRYGYETVQSKLSGWVKKRLYTKSSCTY 804
Query: 726 FDASLEGLKSFF 737
F+ LE F+
Sbjct: 805 FNKVLEETTKFY 816
Score = 51.2 bits (121), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 5/58 (8%)
Query: 28 PYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCKLK 85
P++PY QL M + ++ + + ESPTGTGK+LS++CST+ W +N K K
Sbjct: 18 PFEPYDIQLELMRSIYDAIENYKI-----GIFESPTGTGKTLSIICSTMTWLRNNKKK 70
>gi|1517818|gb|AAB06963.1| helicase, partial [Homo sapiens]
Length = 734
Score = 133 bits (335), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 171/724 (23%), Positives = 279/724 (38%), Gaps = 219/724 (30%)
Query: 146 IFYASRTHSQISQVISEYKKTAY--RVPMAVLASRKHYCTNKYVRD---KENIDEECKLL 200
I+Y SRTHSQ++Q + E KK+ + V + L S+++ C N+ VR + I++ C +
Sbjct: 81 IYYCSRTHSQLAQFVHEVKKSPFGKDVRLVSLGSQQNLCVNEDVRSLGSVQLINDRCVDM 140
Query: 201 LGDRNL-------------------GCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVG 241
R+ CP F N H+ G L+ EV D+E L+ +G
Sbjct: 141 QRSRHEKKKGAEEEKPKRRRQEKQAACP-FYN-HEQMG--LLRDEALAEVKDMEQLLALG 196
Query: 242 QVVRGCSYYAARSMADDAQLVFCPYSYIINPV-------------------------IRG 276
+ R C YY +R AQLV Y +++ I G
Sbjct: 197 KEARACPYYRSRLAIPAAQLVVLSYQMLLHAATRQAAGIRLQDQVVIIDEAHNLIDTITG 256
Query: 277 AMEVDIKGAILILDEAHNIEDIAR-----DAGSVDIDEDVLLKLQ--------------- 316
V++ G+ L + ++ + R A ++ + +L L+
Sbjct: 257 MHSVEVSGSQLCQAHSQLLQYMERYGKRLKAKNLMYLKQILYLLEKFVAVLGGNIKQNPN 316
Query: 317 --------MELEQVCSVNPMIYQPLIE---------------MTQDLVGWIERRKATLAK 353
MEL+ ++N ++Q I+ +++ L G+ ER A +
Sbjct: 317 TQSLSQTGMELK---TINDFLFQSQIDNINLFKVQRYCEKSMISRKLFGFTERYGAVFSS 373
Query: 354 RE------FQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLS 407
RE FQ F L+ LQ P A ++++ +P +
Sbjct: 374 REQPKLAGFQQF---------LQSLQPRTTEALAAP------------ADESQASVPQPA 412
Query: 408 GMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAV 467
++ +EG ++LT +++G + Q +L + TL LNPAV
Sbjct: 413 S-PLMHIEGFLAALTTA-NQDGRVILSRQGSLSQ--------------STLKFLLLNPAV 456
Query: 468 VFKDVAELSLSIILTSGTLSPMNSFSSEL----GVQFGTCLE--APHVIDVDLQVLTSVI 521
F V + ++++ GT+ P++ F +L GV+ +E HVI D +L VI
Sbjct: 457 HFAQVVKECRAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHVIPPD-NILPLVI 515
Query: 522 STGPDNYPLNASYKTADGYKLMEK----LCN------------------------RWRET 553
G N PL +++ D ++M++ LCN W +
Sbjct: 516 CIGVSNQPLEFTFQKRDLPQMMDEVGRILCNLCSVVSGGVVCFFPSYEYLRQVHAHWEKG 575
Query: 554 GQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTI 613
G L A+K +F EPK Q E VL Y I C
Sbjct: 576 GLLGHLAARKKIFQEPKSAHQ--VEQVLLAYSRCIQ---ACG------------------ 612
Query: 614 ESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKKYNDTY 658
QE GA L+V GK ++VG+PFPNI ++ K Y D
Sbjct: 613 --QERGPVTGALLLSVVGGKMSEGINFSDNLGRCVVMVGMPFPNIRSAELQEKMAYLDQT 670
Query: 659 --RSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWL 716
R+ G N +A+NQ+IGR IRH+ D+ +I+LLD+R+ A + W+
Sbjct: 671 LPRAPGQAPPGKALVENLCMKAVNQSIGRAIRHQKDFASIVLLDQRYARPPVLAKLPAWI 730
Query: 717 RKSI 720
R +
Sbjct: 731 RARV 734
>gi|344228422|gb|EGV60308.1| DNA helicase component of transcription factor b [Candida tenuis
ATCC 10573]
Length = 797
Score = 133 bits (334), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 176/811 (21%), Positives = 327/811 (40%), Gaps = 173/811 (21%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+++ + V FPY + Y Q +MC + TLD G+C +LE P+GTGK++SLL T+
Sbjct: 3 FYIDDLPVLFPYPKIYPEQYAYMCDIKKTLDVG---GNC--ILEMPSGTGKTVSLLSLTV 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPL-------ANGGGFIPESQPSTIPPSTNGQTA 129
A+Q + ++ S + + E L AN GF+ + + +
Sbjct: 58 AYQMHYPEHRKVVYCSRTMSEIEKALIELYNLMEYRANELGFVEDFRGLGL--------- 108
Query: 130 QVAMNNKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTN---KY 186
SR + + IS+ +K A V+ + TN K+
Sbjct: 109 -------------------TSRKNLCLHPTISKERKGA------VVDEKCRRITNGQLKH 143
Query: 187 VRDKENIDEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRG 246
++ IDEE + + N C +N++ H + G V+ E L++ G+
Sbjct: 144 RIEEGAIDEEAQRSNPEVNSLCKFHENLYDYEQHDLIPPG----VYSFESLMDFGREKST 199
Query: 247 CSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSV 305
C Y+ R M ++ Y Y+++P I + ++ K +I+I DEAHNI+++ ++ S+
Sbjct: 200 CPYFTVRRMIPFCNIIIYSYHYLLDPKIAERVSKELSKDSIIIFDEAHNIDNVCIESLSL 259
Query: 306 DIDEDVLLKLQMELEQVC-SVNPMIYQPLIEMTQDLVGWIE-RRKATLAKREFQHFFSCW 363
D+ +D L + ++ ++ M Q ++ + +E R+A +A+ E +
Sbjct: 260 DLTDDTLKRATRGANKLSDAIEDMKAQDSEKLQNEYEKLVEGLRQAEIARDEELFMANPT 319
Query: 364 TGDKALRELQEANISR--------QCFPILLECATKAIKEATDT-ESELPHLSGMSVITL 414
L E NI + + F L+ K + ++T S L HL ++ I
Sbjct: 320 LPQDLLDEAIPGNIRKGEHFVSFLKRFIEYLKTRMKVLHVISETPNSFLQHLKELTFIDR 379
Query: 415 EGL---------------------FSSL---TYFFSRNGSHVSDYQLALQKYIKRDSKNP 450
+ L F++L F + ++ +QL L+ + + P
Sbjct: 380 KPLRFCSERLSLLVRTLELNDIEDFTALKDIATFATLVSTYDKGFQLILEPFETEGATVP 439
Query: 451 GGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVI 510
L CL+ ++ K V + S+I+TSGT+SP++ + L F T ++ + +
Sbjct: 440 NP----ILRFTCLDASIAMKPVFDRFSSVIITSGTISPLDMYPKMLN--FETVIQRSYTM 493
Query: 511 DVDLQ-VLTSVISTGPDNYPLNASYK---------------------TADG-------YK 541
+D + L +++ G D +++ ++ T DG Y
Sbjct: 494 TLDRRSFLPMIVTKGSDQVSISSRFEIRNDPSVVRNYGSLLIEFSKITPDGMVVFFPSYL 553
Query: 542 LMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKR 601
ME + + W+ G + K + VE + + L Y + + G
Sbjct: 554 YMESIISMWQTMGVLDEVWKYKLILVETPDAQET--SLALDTYRKACNSG---------- 601
Query: 602 VKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPN---INDIQVSLKKKYNDT- 657
+GA L+V RGK+ GI F + + + + +Y ++
Sbjct: 602 --------------------RGAVLLSVARGKVSEGIDFDHHYGRTVLMIGIPFQYTESR 641
Query: 658 -------YRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRA 710
+ N + N++ A R Q +GR +R + DYG ++L D RF R R+
Sbjct: 642 ILKARLEFLRENNQIRENDFLSFDAMRHAAQCLGRVLRGKDDYGIMVLADRRFA--RKRS 699
Query: 711 HISKWLRKSIKQYD---SFDASLEGLKSFFR 738
+ KW+ +++ D S D +L K F R
Sbjct: 700 QLPKWIAQALNDSDLNLSTDMALANAKKFLR 730
>gi|392870657|gb|EAS32475.2| DNA repair helicase rad15 [Coccidioides immitis RS]
Length = 795
Score = 132 bits (333), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 190/837 (22%), Positives = 346/837 (41%), Gaps = 147/837 (17%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+ + + V FPY + Y Q ++C + TLD GHC +LE P+GTGK++SLL +
Sbjct: 3 FFIDDLPVLFPYPRIYPEQYAYICDLKKTLDVG---GHC--VLEMPSGTGKTVSLLSLII 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAM-NN 135
A+QQ+ +L S + + E L + + T G T++ + +
Sbjct: 58 AYQQHYPSHRKLIYCSRTMSEIEKALTELRELMKYREQQLGYTEDFRALGLTSRKNLCLH 117
Query: 136 KNVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDE 195
+V+++ + T+ A R S + + E K+ V + + EN+D
Sbjct: 118 PSVRREKSGTVVDA-RCRSLTASFVKERKEKGEDVELCLY--------------HENLD- 161
Query: 196 ECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSM 255
LL NL P V ++ L+ G+ + C Y++AR M
Sbjct: 162 ----LLEPSNLVPPG--------------------VFTLDGLIRYGEQHKQCPYFSARRM 197
Query: 256 ADDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLK 314
++ Y Y+++P I + ++ K I++ DEAHNI+++ ++ S+DI ED L K
Sbjct: 198 MPFCNVIIYSYHYLLDPKIAERVSKELSKDCIVVFDEAHNIDNVCIESLSIDITEDSLRK 257
Query: 315 LQMELEQVC-SVNPMIYQPLIEMTQDLVGWIE-RRKATLAKREFQHFFSCWTGDKALREL 372
+ ++ M ++ ++ +E R+A A+ E Q + D L+E
Sbjct: 258 AGRGANNLGHKIDEMKRSDAAKLQKEYEKLVEGLREADQAREEDQLMANPALPDDLLKEA 317
Query: 373 QEANISR--------QCFPILLECATKAIKEATDTE-SELPHLSGMSVI----------- 412
NI R + F L+ K + ++T S L HL ++ I
Sbjct: 318 VPGNIRRAEHFVAFLKRFIEYLKTRMKVLHAISETPLSFLSHLKDLTYIERKPLRFCAER 377
Query: 413 ------TLEGL-------FSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLS 459
TLE + + F + ++ + L L+ + + P L
Sbjct: 378 LTSLVRTLELMNIEEYRPLQEIATFATLVSTYEKGFLLILEPFESDTATVPNP----VLH 433
Query: 460 LWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQ-VLT 518
CL+ A+ K V E S+I+TSGTLSP+ + LG F T L+ + + + + L
Sbjct: 434 FTCLDAAIAIKPVFERFGSVIITSGTLSPLEMYPKMLG--FQTVLQESYSMTLARRSFLP 491
Query: 519 SVISTGPDNYPLNASYK---------------------TADG-------YKLMEKLCNRW 550
+++ G D +++++K T DG Y ME + + W
Sbjct: 492 MIVTRGSDQAQISSAFKIRNDPGVVRNYGNLLLEFSRITPDGIVVFFPSYLYMESIISMW 551
Query: 551 RETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDL 610
+ G + K + VE SQE + L+ Y + G ++ R K D
Sbjct: 552 QGMGILDSIWNYKLILVETP-DSQES-SLALETYRTACCNGRGAILLCVARGKVSEGIDF 609
Query: 611 NTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYN-DTYRSSKNLLSGNE 669
+ + G R + +G+PF + + ++ + YR + ++
Sbjct: 610 D--------HHYG-------RAVLCIGVPFQYTESPILKARLRFMLENYR-----IREDD 649
Query: 670 WYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYD---SF 726
+ A R Q +GR +R + DYG ++L D RFQ++RN+ + KW+ ++I + + S
Sbjct: 650 FLSFDAMRHAAQCLGRVLRGKDDYGIMVLADRRFQKKRNQ--LPKWISQNILESETNLST 707
Query: 727 DASLEGLKSFFRDVKGWVGKKMFNGLENSDNDVDHVSSMDQCKEVTKQNTQELNKSD 783
D ++ KSF R + K G+ ++ + D +++ K ++ QE N+ D
Sbjct: 708 DMAVATAKSFLRTMAQPFKAKDQEGI-STWSLADLERHLEKQKGEAEKKYQEANQRD 763
>gi|119936449|gb|ABM06129.1| excision repair cross-complementing rodent repair deficiency,
complementation group 2 protein [Bos taurus]
Length = 773
Score = 132 bits (333), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 192/812 (23%), Positives = 317/812 (39%), Gaps = 165/812 (20%)
Query: 11 YRKPLNAYHVGGIQVEFPYQ-PYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSL 69
+R P + +V G+ V FPY Y Q +M + TLD H +LE P+GTGK++
Sbjct: 9 HRAPASRLNVDGLLVYFPYDYIYPEQFSYMLELKRTLD-----AKGHGVLEMPSGTGKTV 63
Query: 70 SLLCSTLAWQQNCKLK-NQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQT 128
SLL +A+Q+ L+ +L S + P+ E V + L F + + +P +
Sbjct: 64 SLLALIMAYQRAYPLEVTKLIYCSRTVPEIEKVIEELRKLLSFYEKQEGEKLPFLGLALS 123
Query: 129 AQVAMNNKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVR 188
++ N + ++TP F + + H T YVR
Sbjct: 124 SR---KNLCIHPEVTPLRFGKD------------------------VDGKCHSLTASYVR 156
Query: 189 DKENIDEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCS 248
+ D +L +F V G G +++++DL VG+ C
Sbjct: 157 AQYQ---------RDSSLPHCRFYEEFDVHGRQVPLPTG---IYNLDDLKAVGRRQGWCP 204
Query: 249 YYAARSMADDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDI 307
Y+ AR A +V Y Y+++P I + ++ + A+++ DEAHNI+++ D+ SV++
Sbjct: 205 YFLARYSILHANVVVYSYHYLLDPKIADLVSKELARKAVVVFDEAHNIDNVCIDSMSVNL 264
Query: 308 DEDVLLKLQMELE----QVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCW 363
L + Q LE V + Q L E + LV + R+A+ A+ H +
Sbjct: 265 TRRTLDRCQANLETLQKTVLRIKETDEQRLREEYRRLVEGL--REASAARETDAHLANPV 322
Query: 364 TGDKALRELQEANI-SRQCFPILLECATKAIK-----EATDTESELPHLSGMS------- 410
D+ L+E +I + + F L + +K + ES LSG++
Sbjct: 323 LPDEVLKEAVPGSIRTAEHFLGFLRRLLEYVKWRLRVQHVVQESPPAFLSGLAQRVCIQR 382
Query: 411 -------------VITLE----GLFSSLTYFFSRNGSHVSDYQLALQKYIK-RDSKNPGG 452
+ TLE FS LT + + VS Y I+ D + P
Sbjct: 383 KPLRFCAERLRSLLYTLEISDLTDFSPLT-LLANFATLVSTYAKGFTIIIEPFDDRTPTI 441
Query: 453 NWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELG---VQFGT------- 502
L C++ ++ K V E S+I+TSGTLSP++ + L V T
Sbjct: 442 A-NPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMATFTMTLAR 500
Query: 503 -CLEAPHVIDV--DLQVLTSVISTGPD--------NYPLNASYKTADG-------YKLME 544
CL P +I D ++S T D N L S DG Y+ ME
Sbjct: 501 VCL-CPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFTSYQYME 559
Query: 545 KLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKR 604
W E G + K LF+E + G++ + L+ Y + G
Sbjct: 560 STVASWYEQGILENIQRNKLLFIETQDGAETS--VALEKYQEACENG------------- 604
Query: 605 EGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPF-------------PNINDIQVSLK 651
+GA L+V RGK+ GI F P + LK
Sbjct: 605 -----------------RGAILLSVARGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILK 647
Query: 652 KKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAH 711
+ Y + + N++ A R Q +GR IR + DYG ++ D+RF R
Sbjct: 648 ARLE--YLRDQFQIRENDFLTFDAMRHAAQCVGRAIRGKTDYGLMVFADKRFARADKRGK 705
Query: 712 ISKWLRKSIKQYD---SFDASLEGLKSFFRDV 740
+ +W+++ + + + D ++ K F R +
Sbjct: 706 LPRWIQEHLTDANLNLTVDEGVQVAKYFLRQM 737
>gi|340379359|ref|XP_003388194.1| PREDICTED: Fanconi anemia group J protein homolog [Amphimedon
queenslandica]
Length = 235
Score = 132 bits (333), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 74/236 (31%), Positives = 133/236 (56%), Gaps = 8/236 (3%)
Query: 172 MAVLASRKHYCTNKYVRDKENIDEECKLLLGDRNLG--CPQFKNVH-KVRGHPSLQKGGC 228
M +LASR H C + V N EECK L+ D G C + V K+ L++ G
Sbjct: 1 MVILASRDHTCIHPQVSTSRNKKEECKALI-DYKYGASCAFYHKVQQKLGSQYKLRENGI 59
Query: 229 HEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILI 288
DIEDLV +G+ ++ C YY++R++ ++A+++FCPY+Y+I+P+IR M + ++ +ILI
Sbjct: 60 TTAWDIEDLVTLGRKIKTCPYYSSRALFEEAEIIFCPYNYLIDPLIREQMMIRLEDSILI 119
Query: 289 LDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQVCS-VNPMI---YQPLIEMTQDLVGWI 344
DEAHN+ED AR+A S+ ++ + L +++ E++++ ++P I Y+ + ++ W+
Sbjct: 120 FDEAHNMEDAAREAASLTVNSNQLKEVEEEIDKIMEFLSPEIQNSYRIVYTYVVNISQWM 179
Query: 345 ERRKATLAKREFQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTE 400
+ L R+F+ S W G+ L L+ I+ +++ I + + E
Sbjct: 180 ATQSEKLTIRKFEESCSVWNGNDFLPFLKGIGITIDTHSMIMHHVRTIIDDTFEQE 235
>gi|75858956|ref|XP_868818.1| hypothetical protein AN9436.2 [Aspergillus nidulans FGSC A4]
gi|40747660|gb|EAA66816.1| hypothetical protein AN9436.2 [Aspergillus nidulans FGSC A4]
Length = 797
Score = 132 bits (333), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 181/804 (22%), Positives = 334/804 (41%), Gaps = 164/804 (20%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+ + + V FPY + Y Q +MC + TLD GHC +LE P+GTGK+++LL +
Sbjct: 3 FFIDDLPVLFPYPRIYPEQYAYMCDLKKTLDAG---GHC--VLEMPSGTGKTVTLLSLIV 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAM-NN 135
A+QQ+ +L S + + E L F E T G T++ + +
Sbjct: 58 AYQQHYPEHRKLIYCSRTMSEIEKALAELRELMKFRSEQLGYTEDFRALGLTSRKNLCLH 117
Query: 136 KNVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDE 195
+VK++ + T V+ +R T +V++K+ E
Sbjct: 118 PSVKREKSGT----------------------------VVDARCRSLTAGFVKEKKEKGE 149
Query: 196 ECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSM 255
+ +L C +N+ + H + G V ++ L+N G+ + C Y++AR M
Sbjct: 150 DVEL--------CVYHENLDLLEPHNLVPPG----VFTLDGLLNYGEQHKQCPYFSARRM 197
Query: 256 A-DDAQLVFC-----PYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDID 308
Q+ +C Y Y+++P I + + K I++ DEAHNI+++ ++ S+DI
Sbjct: 198 PLTPVQMPYCNVIIYSYHYLLDPKIAERVSKEFSKDCIVVFDEAHNIDNVCIESLSIDIT 257
Query: 309 EDVLLK-------LQMELEQVCSVNPMIYQPLIEMTQDLVGWIE-RRKATLAKREFQHFF 360
ED L K L+ +++ V S + ++ + + +E R+A A+ E Q
Sbjct: 258 EDSLRKATRGANNLERKIQDVKSSDAE------KLNNEYMKLVEGLREAEQARDEDQFIS 311
Query: 361 SCWTGDKALRELQEANISR-QCFPILLECATKAIK---EATDTESELP-----HLSGMSV 411
+ D L+E NI R + F L+ + +K + T T SE P H+ ++
Sbjct: 312 NPVLPDDLLKEAVPGNIRRAEHFVAFLKRFIEYLKTRMKVTHTISETPLSFLNHVKELTF 371
Query: 412 I-----------------TLEGL-------FSSLTYFFSRNGSHVSDYQLALQKYIKRDS 447
I TLE + + F + ++ + L L+ + +
Sbjct: 372 IERKPLRFCAERLTSLVRTLELINIEDYQPLQEVATFATLVSTYDKGFLLILEPFESEAA 431
Query: 448 KNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAP 507
P L CL+ A+ K V + S+++TSGTLSP+ + LG F T ++
Sbjct: 432 TVPNP----VLHFTCLDAAIAIKPVFDRFSSVVITSGTLSPLEMYPKMLG--FTTVMQES 485
Query: 508 HVIDVDLQ-VLTSVISTGPDNYPLNASYK---------------------TADG------ 539
+ + + + L +++ G D +++S++ T DG
Sbjct: 486 YSMTLARRSFLPMIVTRGSDQAQISSSFQIRNDPGVVRNYGNIVLEFSRITPDGVVVFFP 545
Query: 540 -YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVR 598
Y ME + + W+ G + K + VE + + L+ Y + G +
Sbjct: 546 SYLYMESIISMWQGMGILDSIWNYKLILVETPDAQESS--LALETYRTACCNGRGALLFC 603
Query: 599 KKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKY-NDT 657
R K D + + G R + +G+PF + + ++ +
Sbjct: 604 VARGKVSEGIDFD--------HHYG-------RAVLCIGVPFQYTESRILKARLEFLREN 648
Query: 658 YRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLR 717
YR + N++ A R Q +GR +R + DYG ++L D RFQ++RN+ + KW+
Sbjct: 649 YR-----IRENDFLSFDAMRHAAQCLGRVLRGKDDYGIMVLADRRFQKKRNQ--LPKWIS 701
Query: 718 KSIKQYD---SFDASLEGLKSFFR 738
+++ + + S D ++ K+F R
Sbjct: 702 QALLESETNLSTDMAVATAKNFLR 725
>gi|302802273|ref|XP_002982892.1| hypothetical protein SELMODRAFT_116951 [Selaginella moellendorffii]
gi|300149482|gb|EFJ16137.1| hypothetical protein SELMODRAFT_116951 [Selaginella moellendorffii]
Length = 852
Score = 132 bits (333), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 158/684 (23%), Positives = 274/684 (40%), Gaps = 146/684 (21%)
Query: 146 IFYASRTHSQISQVISEYKKTAYRVPM--AVLASRKHYCTNKYVR---DKENIDEECKLL 200
IF+ SRTHSQ+SQ I E K+T++ + L SRK C N+ V I++ C L
Sbjct: 183 IFFCSRTHSQLSQFIRELKRTSFSTSLKTVALGSRKTLCVNQDVLKLGSASRINDRCLDL 242
Query: 201 ----------LGDRNLGCPQFKNVH-------------KVRGHPSLQKGG---------- 227
+ RN P F + H K P L+K
Sbjct: 243 QKKKKSSSQKVSTRN--SPSFVSHHNFFQVDDQRMIKSKTSACPFLKKQRQRKQFKEAVV 300
Query: 228 CHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAIL 287
+ DIEDLV++GQ + C YY +R+ AQ+V PY +++ R ++ +++K +++
Sbjct: 301 ASQPMDIEDLVHLGQKLGSCPYYGSRNSLPMAQVVVLPYQSLLHAATRESLGINLKDSVV 360
Query: 288 ILDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQVCS--------VNPMIYQPLIEMTQD 339
I DEAHN+ D + S + L ++ +L + S N Q L+ + Q
Sbjct: 361 IFDEAHNLVDTVTNTYSSQLSTLQLRQVSSQLSEYLSRFRTRLAPANRRYIQTLLVLVQA 420
Query: 340 LVGWIERRKATLAKREFQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDT 399
L+ R ++ RE + A+ + + S I L + IKE+
Sbjct: 421 LL----ERLMSVGSREKEPGVQDVQTPAAITTINDFVFSLGIDNINLFKLCRYIKESNIV 476
Query: 400 -------ESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGG 452
+ L + ++ + G F L F + SD ++ + +
Sbjct: 477 NKVSGYGDKYLSQQNELTPSSTAG-FHPLAAFLVSLTTAQSDGRVLIVE---------SS 526
Query: 453 NWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQ-------FGTCLE 505
+ L+ A F +V + + ++IL GTL P+ L Q F +C
Sbjct: 527 DGECMFKFLMLDAAKHFSEVVQQARTVILAGGTLQPVAELRDRLLFQVPDESLHFFSC-- 584
Query: 506 APHVIDVDLQVLTSVISTGPDNYPLNASYKTADGYKLMEKLCNR---------------- 549
H++ + +L I+ GP + +Y++ +++E+L
Sbjct: 585 -GHIVPGE-SILPLAIAKGPSGKTFDFTYQSRSSPQMIEELGRLLINISVIVPEGIVVFF 642
Query: 550 ------------WRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVV 597
W ++G S + KK +F EP+ S E VL+ Y SI+ G +
Sbjct: 643 PSFEYESQVHKCWDKSGILSSILKKKNIFREPRNASA--VEAVLQEYKTSITTGGGALL- 699
Query: 598 RKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYNDT 657
L+ + + + + + C ++VG+P+P+ D ++ K KY D
Sbjct: 700 ------------LSVVGGKMSEGINFSDGMGRC--VVMVGLPYPSSRDPELLEKIKYIDE 745
Query: 658 YRSSKNLLS--------------------GNEWYCNQAFRALNQAIGRCIRHRFDYGAII 697
++KN G ++Y N +A+NQ+IGR IRH DY AI+
Sbjct: 746 LNNTKNRKESSSPPSQQRTGFTLQQCGHRGRDYYENLCIKAVNQSIGRAIRHAKDYAAIL 805
Query: 698 LLDERFQEERN-RAHISKWLRKSI 720
LLD R+ A + +W+++ +
Sbjct: 806 LLDGRYVTTGGPAAKLPEWIKEHL 829
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 35/55 (63%), Gaps = 5/55 (9%)
Query: 27 FPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQN 81
FP+QPY QL M V L++ A++ESPTGTGK+LSL+CS L W ++
Sbjct: 9 FPFQPYAIQLQLMRAVYGALEKGGV-----AIVESPTGTGKTLSLICSVLQWLED 58
>gi|100913204|ref|NP_004390.3| probable ATP-dependent RNA helicase DDX11 isoform 2 [Homo sapiens]
Length = 856
Score = 132 bits (333), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 167/713 (23%), Positives = 275/713 (38%), Gaps = 209/713 (29%)
Query: 146 IFYASRTHSQISQVISEYKKTAY--RVPMAVLASRKHYCTNKYVRD---KENIDEECKLL 200
I+Y SRTHSQ++Q + E KK+ + V + L SR++ C N+ V+ + I++ C +
Sbjct: 229 IYYCSRTHSQLAQFVHEVKKSPFGKDVRLVSLGSRQNLCVNEDVKSLGSVQLINDRCVDM 288
Query: 201 LGDRNL-------------------GCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVG 241
R+ CP F N H+ G L+ EV D+E L+ +G
Sbjct: 289 QRSRHEKKKGAEEEKPKRRRQEKQAACP-FYN-HEQMG--LLRDEALAEVKDMEQLLALG 344
Query: 242 QVVRGCSYYAARSMADDAQLVFCPYSYIINPV-------------------------IRG 276
+ R C YY +R AQLV PY +++ I G
Sbjct: 345 KEARACPYYGSRLAIPAAQLVVLPYQMLLHAATRQAAGIRLQDQVVIIDEAHNLIDTITG 404
Query: 277 AMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMEL----------------- 319
V++ G+ L + ++ + R + + LK + L
Sbjct: 405 MHSVEVSGSQLCQAHSQLLQYVERYGKRLKAKNLMYLKQILYLLEKFVAVLGGNIKQNPN 464
Query: 320 --------EQVCSVNPMIYQPLIE---------------MTQDLVGWIERRKATLAKRE- 355
++ ++N ++Q I+ +++ L G+ ER A + RE
Sbjct: 465 TQSLSQTGTELKTINDFLFQSQIDNINLFKVQRYCEKSMISRKLFGFTERYGAVFSSREQ 524
Query: 356 -----FQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMS 410
FQ F L+ LQ T+A+ D ES+ L S
Sbjct: 525 PKLAGFQQF---------LQSLQPRT-------------TEALAAPAD-ESQASTLRPAS 561
Query: 411 -VITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVF 469
++ ++G ++LT +++G + Q +L + TL LNPAV F
Sbjct: 562 PLMHIQGFLAALTTA-NQDGRVILSRQGSLSQ--------------STLKFLLLNPAVHF 606
Query: 470 KDVAELSLSIILTSGTLSPMNSFSSEL----GVQFGTCLE--APHVIDVDLQVLTSVIST 523
V + ++++ GT+ P++ F +L GV+ +E HVI D +L VI +
Sbjct: 607 AQVVKECRAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHVIPPD-NILPLVICS 665
Query: 524 GPDNYPLNASYKTADGYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKH 583
G N PL +++ RE Q +F EPK Q E VL
Sbjct: 666 GISNQPLEFTFQK--------------RELPQM--------IFQEPKSAHQ--VEQVLLA 701
Query: 584 YYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGK---------- 633
Y I C QE GA L+V GK
Sbjct: 702 YSRCI---QACG--------------------QERGQVTGALLLSVVGGKMSEGINFSDN 738
Query: 634 -----IVVGIPFPNINDIQVSLKKKYNDTY--RSSKNLLSGNEWYCNQAFRALNQAIGRC 686
++VG+PFPNI ++ K Y D R+ G N +A+NQ+IGR
Sbjct: 739 LGRCVVMVGMPFPNIRSAELQEKMAYLDQTLPRAPGQAPPGKALVENLCMKAVNQSIGRA 798
Query: 687 IRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFRD 739
IRH+ D+ +++LLD+R+ A + W+R ++ +F ++ ++ F R+
Sbjct: 799 IRHQKDFASVVLLDQRYARPPVLAKLPAWIRARVEVKATFGPAIAAVQKFHRE 851
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 40/68 (58%), Gaps = 5/68 (7%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
VG I FP+ PY Q FM + L+ A + G + ESPTGTGKSLSL+C L+W
Sbjct: 8 VGAIHFPFPFTPYSIQEDFMAELYRVLE-AGKIG----IFESPTGTGKSLSLICGALSWL 62
Query: 80 QNCKLKNQ 87
++ + K +
Sbjct: 63 RDFEQKKR 70
>gi|303317606|ref|XP_003068805.1| DNA repair helicase rad15 , putative [Coccidioides posadasii C735
delta SOWgp]
gi|240108486|gb|EER26660.1| DNA repair helicase rad15 , putative [Coccidioides posadasii C735
delta SOWgp]
gi|320038802|gb|EFW20737.1| DNA repair helicase RAD3 [Coccidioides posadasii str. Silveira]
Length = 795
Score = 132 bits (333), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 182/792 (22%), Positives = 327/792 (41%), Gaps = 146/792 (18%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+ + + V FPY + Y Q ++C + TLD GHC +LE P+GTGK++SLL +
Sbjct: 3 FFIDDLPVLFPYPRIYPEQYAYICDLKKTLDVG---GHC--VLEMPSGTGKTVSLLSLII 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAM-NN 135
A+QQ+ +L S + + E L + + T G T++ + +
Sbjct: 58 AYQQHYPSHRKLIYCSRTMSEIEKALTELRELMKYREQQLGYTEDFRALGLTSRKNLCLH 117
Query: 136 KNVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDE 195
+V+++ + T+ A R S + + E K+ V + + EN+D
Sbjct: 118 PSVRREKSGTVVDA-RCRSLTASFVKERKEKGEDVELCLY--------------HENLD- 161
Query: 196 ECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSM 255
LL NL P V ++ L+ G+ + C Y++AR M
Sbjct: 162 ----LLEPSNLVPPG--------------------VFTLDGLIRYGEQHKQCPYFSARRM 197
Query: 256 ADDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLK 314
++ Y Y+++P I + ++ K I++ DEAHNI+++ ++ S+DI ED L K
Sbjct: 198 MPFCNVIIYSYHYLLDPKIAERVSKELSKDCIVVFDEAHNIDNVCIESLSIDITEDSLRK 257
Query: 315 LQMELEQVC-SVNPMIYQPLIEMTQDLVGWIE-RRKATLAKREFQHFFSCWTGDKALREL 372
+ ++ M ++ ++ +E R+A A+ E Q + D L+E
Sbjct: 258 AGRGANNLGHKIDEMKRSDAAKLQKEYEKLVEGLREADQAREEDQLMANPALPDDLLKEA 317
Query: 373 QEANISR--------QCFPILLECATKAIKEATDTE-SELPHLSGMSVI----------- 412
NI R + F L+ K + ++T S L HL ++ I
Sbjct: 318 VPGNIRRAEHFVAFLKRFIEYLKTRMKVLHAISETPLSFLSHLKDLTYIERKPLRFCAER 377
Query: 413 ------TLEGL-------FSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLS 459
TLE + + F + ++ + L L+ + + P L
Sbjct: 378 LTSLVRTLELMNIEEYRPLQEIATFATLVSTYEKGFLLILEPFESDTATVPNP----VLH 433
Query: 460 LWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQ-VLT 518
CL+ A+ K V E S+I+TSGTLSP+ + LG F T L+ + + + + L
Sbjct: 434 FTCLDAAIAIKPVFERFGSVIITSGTLSPLEMYPKMLG--FQTVLQESYSMTLARRSFLP 491
Query: 519 SVISTGPDNYPLNASYK---------------------TADG-------YKLMEKLCNRW 550
+++ G D +++++K T DG Y ME + + W
Sbjct: 492 MIVTRGSDQAQISSAFKIRNDPGVVRNYGNLLLEFSRITPDGIVVFFPSYLYMESIISMW 551
Query: 551 RETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDL 610
+ G + K + VE SQE + L+ Y + G ++ R K D
Sbjct: 552 QGMGILDSIWNYKLILVETP-DSQES-SLALETYRTACCNGRGAILLCVARGKVSEGIDF 609
Query: 611 NTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYN-DTYRSSKNLLSGNE 669
+ + G R + +G+PF + + ++ + YR + ++
Sbjct: 610 D--------HHYG-------RAVLCIGVPFQYTESPILKARLRFMLENYR-----IREDD 649
Query: 670 WYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYD---SF 726
+ A R Q +GR +R + DYG ++L D RFQ++RN+ + KW+ ++I + + S
Sbjct: 650 FLSFDAMRHAAQCLGRVLRGKDDYGIMVLADRRFQKKRNQ--LPKWISQNILESETNLST 707
Query: 727 DASLEGLKSFFR 738
D ++ KSF R
Sbjct: 708 DMAVATAKSFLR 719
>gi|167524360|ref|XP_001746516.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775278|gb|EDQ88903.1| predicted protein [Monosiga brevicollis MX1]
Length = 1041
Score = 132 bits (332), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 109/364 (29%), Positives = 163/364 (44%), Gaps = 106/364 (29%)
Query: 2 VSEANPNPNYRKPLNAYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRA------------ 49
++ A P P R+ + + G +V FPY+PY SQ + + I L +
Sbjct: 1 MASAEPAPTTRE----FMISGQRVLFPYKPYPSQFLLISATIKALLKVCAPTCLTAKCLL 56
Query: 50 ------------------QRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCK-------- 83
Q+D +ALLESPTGTGK+L+LLCS LAWQ++ K
Sbjct: 57 NHVIKPPPSLTKPWVRLEQKD---NALLESPTGTGKTLALLCSVLAWQKSEKMRIAAMRA 113
Query: 84 -LKNQLANISHSK-----------------PDTEAVTDPLANG----------------- 108
L+ QLA +HS+ P P ANG
Sbjct: 114 DLEAQLATDAHSQDEEDETMANTKAKPAHVPSRPLSRGPGANGQLLEEEDDDFRVTALER 173
Query: 109 --GGFIPESQPSTIP----PSTN------------GQTAQVAMNNKNVKKKMTPTIFYAS 150
GF + S P PS + + ++ ++ K+ PTI++ +
Sbjct: 174 LNTGFKGARRASPFPGPVKPSNTTVNAAAAAPRTTPASKKAKLSAQDRKQLRVPTIYFGT 233
Query: 151 RTHSQISQVISEYKKTAYR-VPMAVLASRKHYCTNKYVRDKENIDEECKLLLGDRNLG-- 207
RTH Q++QV SE K++AY V M VL+SR+H C + V + ++EC LLG + G
Sbjct: 234 RTHRQLAQVTSELKRSAYSDVRMTVLSSREHTCVHPRVSKASHKNDECSKLLGGKGQGGA 293
Query: 208 -CPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPY 266
C + N ++ + G D+EDLV G+ R C+Y+AAR +A A+LVFCPY
Sbjct: 294 QCHCYHNAKQLANGRQFRHGAW----DLEDLVARGRKQRACAYFAARELAPTAELVFCPY 349
Query: 267 SYII 270
+Y++
Sbjct: 350 NYLV 353
Score = 120 bits (302), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/195 (36%), Positives = 106/195 (54%), Gaps = 27/195 (13%)
Query: 596 VVRKKRVKREGNNDLNTIESQENA----NKKGASFLAVCRGK---------------IVV 636
VV++ R +G D N + GA F+AVCRGK I V
Sbjct: 517 VVKEPRTSHDGGFDGQLKRFYANVAPRKRRTGALFMAVCRGKASEGIDFSDDRARAVITV 576
Query: 637 GIPFPNINDIQVSLKKKYND--TYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYG 694
GIPFP D +V+ K++YN + ++ + L+G++WY QAFRALNQA+GRCIRHR D+G
Sbjct: 577 GIPFPAFKDPEVTQKREYNTKLSKQARSSHLNGDQWYQIQAFRALNQALGRCIRHRNDWG 636
Query: 695 AIILLDERFQEE-RNRAHISKWLRKSIKQYDSFDASLEGLKSFFRDVKGWVGKKMFNGLE 753
AI+++D R +E + + +SKWLR ++ +D+ L++F V +G++ G
Sbjct: 637 AIVMIDARMKESAQYQGQLSKWLRTQVQHFDTVPTFAHRLETF---VAQCMGQEWNRGAA 693
Query: 754 NSDNDVDHV--SSMD 766
S VD + S MD
Sbjct: 694 ASHAHVDDLINSVMD 708
>gi|225681891|gb|EEH20175.1| TFIIH basal transcription factor complex helicase subunit
[Paracoccidioides brasiliensis Pb03]
Length = 773
Score = 132 bits (332), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 185/790 (23%), Positives = 322/790 (40%), Gaps = 185/790 (23%)
Query: 39 MCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCKLKNQLANISHSKPDT 98
MC + TLD GHC +LE P+GTGK++SLL +A+QQ+ + +L S + +
Sbjct: 1 MCDLKKTLDAG---GHC--VLEMPSGTGKTVSLLSLIIAYQQHKPEQRKLIYCSRTMSEI 55
Query: 99 EAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAM-NNKNVKKKMTPTIFYASRTHSQIS 157
E L + + T G T++ + + +VK++ + TI A R S +
Sbjct: 56 EKALAELKALMKYRAQQLGYTEDFRGLGLTSRKNLCLHPSVKREKSGTIVDA-RCRSLTA 114
Query: 158 QVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEECKLLLGDRNLGCPQFKNVHKV 217
+ E K+ V + + EN+D LL NL P
Sbjct: 115 GFVKEKKERGEDVELCIY--------------HENLD-----LLEPSNLVPPG------- 148
Query: 218 RGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGA 277
V ++D++ G+ + C Y++ R M ++ Y Y+++P I
Sbjct: 149 -------------VFTLDDMIKYGEQHKQCPYFSVRRMMPFCNVIIYSYHYLLDPKIAER 195
Query: 278 MEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLK-------LQMELEQVCSVNPMI 329
+ ++ K +I++ DEAHNI+++ ++ S+D+ ED L K L+ ++++ S +
Sbjct: 196 VSQELSKDSIVVFDEAHNIDNVCIESLSIDLTEDSLRKASRGANNLERRIDEMKSSDA-- 253
Query: 330 YQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRELQEANISR-QCFPILLEC 388
+ L Q LV + R+A A++E Q + D L+E NI R + F L+
Sbjct: 254 -EKLQNEYQKLVEGL--READEARQEEQLMANPALPDDLLKEAVPGNIRRAEHFVAFLKR 310
Query: 389 ATKAIK---EATDTESELP-----HLSGMSVI-----------------TLEGL------ 417
+ +K + T T SE P HL ++ I TLE +
Sbjct: 311 FIEYLKTRMKVTHTISETPPSFLAHLKDLTFIERKPLRFCAERLTSLVRTLELMNLEDYQ 370
Query: 418 -FSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELS 476
+ F + ++ + L L+ + + P L CL+ A+ K V +
Sbjct: 371 PLQQVAAFATLAATYEKGFLLILEPFESDTATVPNP----ILHFTCLDAAIAIKPVFDRF 426
Query: 477 LSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQ-VLTSVISTGPDNYPLNASYK 535
S+I+TSGTLSP+ + LG F T L+ + + + + L +++ G D +++S++
Sbjct: 427 SSVIITSGTLSPLEMYPKMLG--FTTVLQESYSMTLARRSFLPMIVTRGSDQAQISSSFQ 484
Query: 536 ---------------------TADG-------YKLMEKLCNRWRETGQWSRLNAKKPLFV 567
T DG Y ME + + W+ G + K + V
Sbjct: 485 IRNDPGVVRNYGNLLLEFSRITPDGIVVFFPSYLYMESIISMWQGMGILDSIWNYKLILV 544
Query: 568 EPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFL 627
E SQE + L+ Y + G +GA L
Sbjct: 545 ETP-DSQES-SLALETYRTACCNG------------------------------RGAILL 572
Query: 628 AVCRGK---------------IVVGIPFPNINDIQVSLKKKY-NDTYRSSKNLLSGNEWY 671
V RGK I +G+PF + + ++ + YR + N++
Sbjct: 573 CVARGKVSEGIDFDHHYGRTVICIGVPFQYTESRILKARLEFLRENYR-----IRENDFL 627
Query: 672 CNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYD---SFDA 728
A R Q +GR +R + DYG ++L D RFQ + RA + KW+ +++ + + S D
Sbjct: 628 SFDAMRHAAQCLGRVLRGKDDYGVMVLADRRFQ--KKRAQLPKWISQAMLESETNLSTDM 685
Query: 729 SLEGLKSFFR 738
++ KSF R
Sbjct: 686 AMATAKSFLR 695
>gi|356522168|ref|XP_003529720.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8-like [Glycine max]
Length = 897
Score = 132 bits (332), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 165/711 (23%), Positives = 285/711 (40%), Gaps = 186/711 (26%)
Query: 146 IFYASRTHSQISQVISEYKKTAYRVPMAV--LASRKHYCTNKYVRDKEN---IDEECKLL 200
+++ SRTHSQ+SQ I E ++T + M V L SRK+ C N+ V N I+E C L
Sbjct: 190 VYFCSRTHSQLSQFIKELRRTVFANEMNVVSLGSRKNLCINEEVVALGNSTRINERCLEL 249
Query: 201 LGDRNLGCPQFKNVH---------KVRGHPSLQKGGCHEVH-------------DIEDLV 238
+ + KN+ G P L+K H V DIEDL
Sbjct: 250 QKKKKNEATKVKNLKVGAGVCRTKASSGCPMLRK---HRVQQEFRNEVSQQGPLDIEDLA 306
Query: 239 NVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDI 298
N+G+ + C YY +RS+ A LV PY +++ R + +++K I+I+DEAHN+ D
Sbjct: 307 NLGRTMGACPYYGSRSLVQGADLVVLPYQSLLSKSSRETLGLNLKSNIIIIDEAHNLADS 366
Query: 299 ARDAGSVDIDEDVLLKLQMELEQVCSVNPMIYQPLIEMTQDLVGWIERR----------- 347
+ I L + +E+ E ++L+G RR
Sbjct: 367 LINMYDSKITSSQLEIVHRHVER-----------YFERFRNLLGPANRRYIQTLMVLMRA 415
Query: 348 --KATLAKREFQHFFSCWTGDKALRELQEANISRQCFPILLEC---------ATKAIKEA 396
+A L ++ SC +A E + + L E K IKE+
Sbjct: 416 FLRALLDDKDGNLKDSCRDTAQASEESGACDFTMAINDFLFELNIDNINLVKLLKYIKES 475
Query: 397 ------------TDTESELPHLSGMSVITLEG----LFSSLTYFFSRNGSHVSDYQLALQ 440
T +++P + + EG F +L ++ D ++ +
Sbjct: 476 NIMHKVNGYGEKVATLAKIPAIHIIGEQAEEGSCISAFQALADILLSLTNNDGDGRIIIS 535
Query: 441 KYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSEL---- 496
+ K GG+ + + L+ +F ++ + + +++L GTL P+ L
Sbjct: 536 RSRSTSFKKQGGHIKYVM----LSGEKIFSEIVDEAHAVVLVGGTLQPIEETRERLFPWL 591
Query: 497 ---GVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTADGYKLMEK----LCN- 548
+ F +C H++ D ++ ++ GP + S+ + +M + LCN
Sbjct: 592 PPNQLHFFSC---GHIVPPD-SIMPIAVTRGPTGRSFDFSFSSRSSPDMMRELGLLLCNL 647
Query: 549 -----------------------RWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYY 585
W+ +G R+ +K +F EP+ + D E VLK Y
Sbjct: 648 VTVVHEGIVVFFPSFDYENRVYEHWKSSGILERIIKRKRVFREPR--NNMDVESVLKEYK 705
Query: 586 NSISQGSKCAVVRKKRVKREGNNDLNTIESQEN-ANKKGASFLAVCRGK----------- 633
++I + ++ + S+ N A+ GA LAV K
Sbjct: 706 DTI-------------------DTISVMNSEVNQASHNGAILLAVVGAKLSEGINLSDGM 746
Query: 634 ----IVVGIPFPNINDIQVSLKKKYNDTYR-----------SSKNLLSGN---------- 668
++VG+P+P+ +DI++ + K+ + +R SS +L SG+
Sbjct: 747 GRCIVMVGLPYPSPSDIELLERIKHIEGFRNLKLPENPSVSSSYDLYSGDVQGGFDILRS 806
Query: 669 ------EWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHIS 713
E+Y N +A+NQ+IGR IRH DY AI+L+D R+ + ++ S
Sbjct: 807 CSHRGKEYYENLCMKAVNQSIGRAIRHINDYAAILLVDTRYASDSSKRSFS 857
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 40/63 (63%), Gaps = 5/63 (7%)
Query: 27 FPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCKLKN 86
FP++PY Q+ FM + +L++ ++LESPTGTGK++S++CS L W + +L+
Sbjct: 13 FPFEPYSIQIDFMNSLYESLNQGGV-----SMLESPTGTGKTMSVICSALQWVLDRRLQQ 67
Query: 87 QLA 89
A
Sbjct: 68 DEA 70
>gi|115492105|ref|XP_001210680.1| DNA repair helicase RAD3 [Aspergillus terreus NIH2624]
gi|114197540|gb|EAU39240.1| DNA repair helicase RAD3 [Aspergillus terreus NIH2624]
Length = 790
Score = 132 bits (332), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 179/797 (22%), Positives = 328/797 (41%), Gaps = 156/797 (19%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+ + + V FPY + Y Q +MC + TLD GHC +LE P+GTGK++SLL +
Sbjct: 3 FFIDDLPVLFPYPRIYPEQYAYMCDLKKTLDAG---GHC--VLEMPSGTGKTVSLLSLIV 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAM-NN 135
A+Q + +L S + + E L F + T G T++ + +
Sbjct: 58 AYQLHYPEHRKLIYCSRTMSEIEKALAELKALMKFRAKELGYTEDFRALGLTSRKNLCLH 117
Query: 136 KNVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDE 195
+VK++ + T V+ +R T +V++K+ E
Sbjct: 118 PSVKREKSGT----------------------------VVDARCRSLTAGFVKEKKERGE 149
Query: 196 ECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSM 255
+ +L C +N+ + H + G V ++ L+ G+ + C Y++AR M
Sbjct: 150 DVEL--------CTYHENLDLLEPHNLVPPG----VFTLDGLIKYGEQHKQCPYFSARRM 197
Query: 256 ADDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLK 314
++ Y Y+++P I + + K I++ DEAHNI+++ ++ S+DI ED L K
Sbjct: 198 MPFCNVIIYSYHYLLDPKIAERVSREFSKDCIVVFDEAHNIDNVCIESLSIDITEDSLRK 257
Query: 315 -------LQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDK 367
L+ ++ ++ S + Q E T+ + G R+A A+ E Q + D
Sbjct: 258 ATRGANNLERKITEMKSSDAEKLQN--EYTKLVEGL---REAEQAREEDQFISNPVLPDD 312
Query: 368 ALRELQEANISR-QCFPILLECATKAIK---EATDTESELP-----HLSGMSVI------ 412
L+E NI R + F L+ + +K + T T SE P H+ ++ I
Sbjct: 313 LLKEAVPGNIRRAEHFVAFLKRFIEYLKTRMKVTHTISETPPSFLTHVKDLTYIERKPLR 372
Query: 413 -----------TLEGL-------FSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNW 454
TLE + + F + ++ + L L+ + + P
Sbjct: 373 FCAERLTSLVRTLELINIEDYQPLQEVATFATLVATYDKGFLLILEPFESEAATVPNP-- 430
Query: 455 THTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDL 514
L CL+ A+ K V + S+I+TSGTLSP+ + LG F T ++ + + +
Sbjct: 431 --ILHFTCLDAAIAIKPVFDRFSSVIITSGTLSPLEMYPKMLG--FTTVMQESYSMTLAR 486
Query: 515 Q-VLTSVISTGPDNYPLNASYK---------------------TADG-------YKLMEK 545
+ L +++ G D +++S++ T DG Y ME
Sbjct: 487 RSFLPMIVTRGSDQAQISSSFQIRNDPGVVRNYGNIVLEFSRITPDGVVVFFPSYLYMES 546
Query: 546 LCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKRE 605
+ + W+ G + K + VE + + L+ Y + G + R K
Sbjct: 547 IISMWQGMGILDSIWNYKLILVETPDAQESS--LALETYRTACCNGRGAILFCVARGKVS 604
Query: 606 GNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKY-NDTYRSSKNL 664
D + + G R + +G+PF + + ++ + YR
Sbjct: 605 EGIDFD--------HHYG-------RAVLCIGVPFQYTESRILKARLEFLRENYR----- 644
Query: 665 LSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYD 724
+ N++ A R Q +GR +R + DYG ++L D RFQ + R+ + KW+ +++ + +
Sbjct: 645 IRENDFLSFDAMRHAAQCLGRVLRGKDDYGVMVLADRRFQ--KKRSQLPKWISQAMLESE 702
Query: 725 ---SFDASLEGLKSFFR 738
S D ++ K+F R
Sbjct: 703 TNLSTDMAVATAKNFLR 719
>gi|169763188|ref|XP_001727494.1| DNA repair helicase rad15 [Aspergillus oryzae RIB40]
gi|83770522|dbj|BAE60655.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 794
Score = 132 bits (332), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 180/794 (22%), Positives = 326/794 (41%), Gaps = 150/794 (18%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+ + + V FPY + Y Q +MC + TLD GHC +LE P+GTGK++SLL +
Sbjct: 3 FFIDDLPVLFPYPRIYPEQYAYMCDLKKTLDAG---GHC--VLEMPSGTGKTVSLLSLIV 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAM-NN 135
A+Q + +L S + + E L F + T G T++ + +
Sbjct: 58 AYQMHYPEHRKLIYCSRTMSEIEKALAELKALMKFRTQQLGYTEDFRALGLTSRKNLCLH 117
Query: 136 KNVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDE 195
+VK++ + TI + +R T +V++K+ E
Sbjct: 118 PSVKREKSGTI----------------------------VDARCRSLTAGFVKEKKERGE 149
Query: 196 ECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSM 255
+ +L C +N+ + H + G V ++ L+ G+ + C Y++AR M
Sbjct: 150 DVEL--------CVYHENLDLLEPHNLVPPG----VFTLDGLLKYGEDHKQCPYFSARRM 197
Query: 256 ADDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLK 314
++ Y Y+++P I + + K I++ DEAHNI+++ ++ S+DI E+ L K
Sbjct: 198 MPFCNVIIYSYHYLLDPKIAERVSREFSKDCIVVFDEAHNIDNVCIESLSIDITENSLRK 257
Query: 315 LQM---ELEQVCSVNPMIYQPLIEMTQDLVGWIE-RRKATLAKREFQHFFSCWTGDKALR 370
LE+ +N M ++ + +E R+A A+ E Q + D L+
Sbjct: 258 ATRGANNLER--KINEMKSSDAEKLQSEYSKLVEGLREAEQAREEDQFISNPVLPDDLLK 315
Query: 371 ELQEANISR-QCFPILLECATKAIK---EATDTESELP-----HLSGMSVI--------- 412
E NI R + F L+ + +K + T T SE P H+ ++ I
Sbjct: 316 EAVPGNIRRAEHFISFLKRFIEYLKTRMKVTHTISETPPSFLTHVKDLTYIERKPLRFCA 375
Query: 413 --------TLEGL-------FSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHT 457
TLE + + F + ++ + L L+ + + P
Sbjct: 376 ERLTSLVRTLELINIEDYQPLQEVATFATLVSTYDKGFLLILEPFESEAATVPNP----V 431
Query: 458 LSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQ-V 516
L CL+ A+ K V E S+I+TSGTLSP+ + LG F T ++ + + + +
Sbjct: 432 LHFTCLDAAIAIKPVFERFSSVIITSGTLSPLEMYPKMLG--FTTVMQESYSMTLARRSF 489
Query: 517 LTSVISTGPDNYPLNASYK---------------------TADG-------YKLMEKLCN 548
L V++ G D +++S++ T DG Y ME + +
Sbjct: 490 LPMVVTRGSDQAQISSSFQIRNDPGVVRNYGNIVLEFSRITPDGIVVFFPSYLYMESIIS 549
Query: 549 RWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNN 608
W+ G + K + VE + + L+ Y + G ++ R K
Sbjct: 550 MWQGMGILDSIWNYKLILVETPDAQESS--LALETYRTACCNGRGAILMCVARGKVSEGI 607
Query: 609 DLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKY-NDTYRSSKNLLSG 667
D + + G R I +G+PF + + ++ + YR +
Sbjct: 608 DFD--------HHYG-------RAVICIGVPFQYTESRILKARLEFLRENYR-----IRE 647
Query: 668 NEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYD--- 724
N++ A R Q +GR +R + DYG ++L D+RFQ + R + KW+ +++ + +
Sbjct: 648 NDFLSFDAMRHAAQCLGRVLRGKDDYGVMVLADKRFQ--KKRTQLPKWISQAMLESETNL 705
Query: 725 SFDASLEGLKSFFR 738
S D ++ K+F R
Sbjct: 706 STDMAVATAKNFLR 719
>gi|2632247|emb|CAA67895.1| CHL1 protein [Homo sapiens]
Length = 680
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 167/713 (23%), Positives = 275/713 (38%), Gaps = 209/713 (29%)
Query: 146 IFYASRTHSQISQVISEYKKTAY--RVPMAVLASRKHYCTNKYVRD---KENIDEECKLL 200
I+Y SRTHSQ++Q + E KK+ + V + L SR++ C N+ V+ + I++ C +
Sbjct: 53 IYYCSRTHSQLAQFVHEVKKSPFGKDVRLVSLGSRQNLCVNEDVKSLGSVQLINDRCVDM 112
Query: 201 LGDRNL-------------------GCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVG 241
R+ CP F N H+ G L+ EV D+E L+ +G
Sbjct: 113 QRSRHEKKKGAEEEKPKRRRQEKQAACP-FYN-HEQMG--LLRDEALAEVKDMEQLLALG 168
Query: 242 QVVRGCSYYAARSMADDAQLVFCPYSYIINPV-------------------------IRG 276
+ R C YY +R AQLV PY +++ I G
Sbjct: 169 KEARACPYYGSRLAIPAAQLVVLPYQMLLHAATRQAAGIRLQDQVVIIDEAHNLIDTITG 228
Query: 277 AMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMEL----------------- 319
V++ G+ L + ++ + R + + LK + L
Sbjct: 229 MHSVEVSGSQLCQAHSQLLQYVERYGKRLKAKNLMYLKQILYLLEKFVAVLGGNIKQNPN 288
Query: 320 --------EQVCSVNPMIYQPLIE---------------MTQDLVGWIERRKATLAKRE- 355
++ ++N ++Q I+ +++ L G+ ER A + RE
Sbjct: 289 TQSLSQTGTELKTINDFLFQSQIDNINLFKVQRYCEKSMISRKLFGFTERYGAVFSSREQ 348
Query: 356 -----FQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMS 410
FQ F L+ LQ T+A+ D ES+ L S
Sbjct: 349 PKLAGFQQF---------LQSLQPRT-------------TEALAAPAD-ESQASTLRPAS 385
Query: 411 -VITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVF 469
++ ++G ++LT +++G + Q +L + TL LNPAV F
Sbjct: 386 PLMHIQGFLAALTTA-NQDGRVILSRQGSLSQ--------------STLKFLLLNPAVHF 430
Query: 470 KDVAELSLSIILTSGTLSPMNSFSSEL----GVQF--GTCLEAPHVIDVDLQVLTSVIST 523
V + ++++ GT+ P++ F +L GV+ G + HVI D +L VI +
Sbjct: 431 AQVVKECRAVVIAGGTMQPVSDFRQQLLACAGVEAERGGGVFCGHVIPPD-NILPLVICS 489
Query: 524 GPDNYPLNASYKTADGYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKH 583
G N PL +++ RE Q +F EPK Q E VL
Sbjct: 490 GISNQPLEFTFQK--------------RELPQM--------IFQEPKSAHQ--VEQVLLA 525
Query: 584 YYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGK---------- 633
Y I C QE GA L+V GK
Sbjct: 526 YSRCI---QACG--------------------QERGQVTGALLLSVVGGKMSEGINFSDN 562
Query: 634 -----IVVGIPFPNINDIQVSLKKKYNDTY--RSSKNLLSGNEWYCNQAFRALNQAIGRC 686
++VG+PFPNI ++ K Y D R+ G N +A+NQ+IGR
Sbjct: 563 LGRCVVMVGMPFPNIRSAELQEKMAYLDQTLPRAPGQAPPGKALVENLCMKAVNQSIGRA 622
Query: 687 IRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFRD 739
IRH+ D+ +++LLD+R+ A + W+R ++ +F ++ ++ F R+
Sbjct: 623 IRHQKDFASVVLLDQRYARPPVLAKLPAWIRARVEVKATFGPAIAAVQKFHRE 675
>gi|224165815|ref|XP_002338859.1| predicted protein [Populus trichocarpa]
gi|222873678|gb|EEF10809.1| predicted protein [Populus trichocarpa]
Length = 104
Score = 132 bits (331), Expect = 2e-27, Method: Composition-based stats.
Identities = 61/100 (61%), Positives = 78/100 (78%)
Query: 543 MEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRV 602
MEKL NRWRETGQWSRLNA+KPLFVEP+GGSQEDF+ +LK YY+ I + + A+ RK++V
Sbjct: 1 MEKLSNRWRETGQWSRLNARKPLFVEPRGGSQEDFDSILKGYYDCIRRDKRPALGRKRKV 60
Query: 603 KREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPN 642
K+ N L+ ES +N+ K GA+FLAVCRGK+ GI F +
Sbjct: 61 KKVDANHLDGTESTDNSEKGGAAFLAVCRGKVSEGIDFSD 100
>gi|195441757|ref|XP_002068655.1| GK23572 [Drosophila willistoni]
gi|194164740|gb|EDW79641.1| GK23572 [Drosophila willistoni]
Length = 196
Score = 132 bits (331), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 110/216 (50%), Gaps = 51/216 (23%)
Query: 542 LMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKR 601
++ K + W+ +G W+ + AKKP+F+EP+G Q F ++ +Y +I
Sbjct: 1 MLNKCVDAWQTSGLWADIAAKKPIFLEPRGKDQ--FTTTMEEFYQAIR------------ 46
Query: 602 VKREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDI 646
+ KGA F+AVCRGK I+ G+P+P + D
Sbjct: 47 ------------------DSKGACFMAVCRGKVSEGLDFADRNGRAVIIAGLPYPPLKDP 88
Query: 647 QVSLKKKYNDTYRSSKN-LLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQE 705
+V LK++Y + R+ +N LL+G EWY A RA+N AIGR IRHR DYGAI+L D RFQ+
Sbjct: 89 KVILKRRYLEANRTKENQLLTGQEWYNLDATRAVNHAIGRVIRHRHDYGAILLCDSRFQD 148
Query: 706 ERNRAHISKWLRKSI---KQYDSFDASLEGLKSFFR 738
+SKW+R + Q F + L+ FFR
Sbjct: 149 NSQVQQLSKWIRGHLGARPQCSPFGPIVRELRQFFR 184
>gi|308499723|ref|XP_003112047.1| CRE-RTEL-1 protein [Caenorhabditis remanei]
gi|308268528|gb|EFP12481.1| CRE-RTEL-1 protein [Caenorhabditis remanei]
Length = 535
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 102/357 (28%), Positives = 161/357 (45%), Gaps = 99/357 (27%)
Query: 479 IILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYK--- 535
++L SGTLSP+ +F+ +G+ FG LE H + + VLTS+++ G L S++
Sbjct: 12 VLLASGTLSPIQAFTYNMGLNFGAILENEHALK-QVPVLTSIVTRGKHG-GLTGSFQNRK 69
Query: 536 ------------------TADG-------YKLMEKLCNRWRETGQ--------WSRLNAK 562
T G Y M++L W+ W+R+
Sbjct: 70 NVNYVSDVAEALIRVMEATPQGILVFFSSYSQMDELVATWKTMKSAANSTDTFWARMEKS 129
Query: 563 KPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKK 622
K + VEP+ +E+ V Y +S+
Sbjct: 130 KRVVVEPRA--KEELAAVRLKYTQGVSEPH------------------------------ 157
Query: 623 GASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKKYNDTYRSSKNLL-- 665
GA+ LAVCRGK I+VGIP+P I+D +V LKKKY D K++
Sbjct: 158 GAALLAVCRGKVSEGIDFCDAESRAVIIVGIPYPPIHDERVVLKKKYLDDLMGRKDVTHE 217
Query: 666 --SGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQY 723
S +WY +AFRA+NQAIGR +RH+ D+G ++LLD R+ + KWLR +I +
Sbjct: 218 KQSSTDWYQMEAFRAVNQAIGRVLRHKNDFGTVVLLDTRYATAKPEM-FPKWLRSTISRM 276
Query: 724 DSFDASLEGLKSFFR------DVKGWVGKKMFNGLENSDNDVDHVSSM-DQCKEVTK 773
DS + +L+ + FF+ +V ++ K +FN ++ VD++ QCK ++
Sbjct: 277 DSDNCALKTAR-FFKERCHLIEVSSFL-KILFNFEYFQNSKVDYIKKQAKQCKSFSQ 331
>gi|350629867|gb|EHA18240.1| DNA repair helicase, subunit of TFIIH [Aspergillus niger ATCC 1015]
Length = 811
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 187/813 (23%), Positives = 327/813 (40%), Gaps = 178/813 (21%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+ + + V FPY + Y Q +MC + TLD GHC +LE P+GTGK++SLL +
Sbjct: 3 FFIDDLPVLFPYPRIYPEQYAYMCDLKKTLDAG---GHC--VLEMPSGTGKTVSLLSLIV 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNK 136
A+QQ+ +L S + + E L F + T G T++ K
Sbjct: 58 AYQQHYPEHRKLIYCSRTMSEIEKALAELKALMKFRAKELGYTEDFRALGLTSR-----K 112
Query: 137 NVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE 196
N+ + P++ R S AV+ +R T +V++K+ E+
Sbjct: 113 NLC--LHPSV---KREKSG-----------------AVVDARCRSLTAGFVKEKKERGED 150
Query: 197 CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMA 256
+L C +N+ + H + G V ++ L+ G+ + C Y++AR M
Sbjct: 151 VEL--------CVYHENLDLLEPHNLVPPG----VFTLDGLLKYGEEHKQCPYFSARRML 198
Query: 257 DDA-----QLVFC-----PYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSV 305
A Q+ FC Y Y+++P I + ++ K I++ DEAHNI+++ ++ S+
Sbjct: 199 LQAYSQIVQMPFCNVIIYSYHYLLDPKIAERVSRELSKDCIVVFDEAHNIDNVCIESLSI 258
Query: 306 DIDEDVLLKLQM---ELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFS- 361
D+ ED L K LE+ +N M ++ + +E +A RE F S
Sbjct: 259 DLTEDSLRKATRGANNLER--KINEMKTSDAEKLQNEYSKLVEGLQAAEQAREEDQFISN 316
Query: 362 CWTGDKALRELQEANISR--------QCFPILLECATKAIKEATDTE-SELPHLSGMSVI 412
D L+E NI R + F L+ K + ++T S L H+ ++ I
Sbjct: 317 PVLPDDLLKEAVPGNIRRAEHFVSFLKRFIEYLKTRMKVMHTISETPPSFLTHVKDLTYI 376
Query: 413 -----------------TLEGL-------FSSLTYFFSRNGSHVSDYQLALQKYIKRDSK 448
TLE + + F + ++ + L L+ + +
Sbjct: 377 ERKPLRFCAERLTSLVRTLELINIEDYQPLQEVATFATLVATYEKGFLLILEPFESEAAT 436
Query: 449 NPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPH 508
P L CL+ A+ K V E S+I+TSGTLSP+ + LG F ++ +
Sbjct: 437 VPNP----VLHFTCLDAAIAIKPVFERFSSVIITSGTLSPLEMYPKMLG--FNAVMQESY 490
Query: 509 VIDVDLQ-VLTSVISTGPDNYPLNASYK---------------------TADG------- 539
+ + + L +++ G D +++S++ T DG
Sbjct: 491 SMTLARRSFLPMIVTRGSDQAQISSSFQIRNDPGVVRNYGNLVLEFSRITPDGVVVFFPS 550
Query: 540 YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRK 599
Y ME + + W+ G + K + VE + + L+ Y + G
Sbjct: 551 YLYMESIISMWQGMGILDSIWNYKLILVETPDAQESS--LALETYRTACCNG-------- 600
Query: 600 KRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPN-----INDIQVSLKKKY 654
+GA L V RGK+ GI F + + +I V +
Sbjct: 601 ----------------------RGALLLCVARGKVSEGIDFDHHYGRAVINIGVPFQYTE 638
Query: 655 NDTYRSSKNLL------SGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERN 708
+ ++ L N++ A R Q +GR +R + DYG ++L D RFQ++RN
Sbjct: 639 SRILKARLEFLRENYRIRENDFLSFDAMRHAAQCLGRVLRGKDDYGVMVLADRRFQKKRN 698
Query: 709 RAHISKWLRKSIKQYD---SFDASLEGLKSFFR 738
+ + KW+ +++ + + S D + K+F R
Sbjct: 699 Q--LPKWINQAMLESETNLSTDMAAATAKNFLR 729
>gi|296822250|ref|XP_002850254.1| DNA repair helicase RAD3 [Arthroderma otae CBS 113480]
gi|238837808|gb|EEQ27470.1| DNA repair helicase RAD3 [Arthroderma otae CBS 113480]
Length = 792
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 180/803 (22%), Positives = 333/803 (41%), Gaps = 164/803 (20%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+++ + + FPY + Y Q +MC + LD GHC +LE P+GTGK+++LL +
Sbjct: 3 FYIDDLPILFPYPRIYPEQYAYMCDLKKVLDAG---GHC--VLEMPSGTGKTITLLALIV 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAM-NN 135
A+QQ+ +L S + + E L + + + G T++ + +
Sbjct: 58 AYQQHYPEHRKLIYCSRTMSEIEKALSELHALMKYRSQKLGAVEDFRALGLTSRKNLCLH 117
Query: 136 KNVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDE 195
+VK++ + T+ A R S + + E K+ V + + EN+D
Sbjct: 118 PSVKREKSGTVVDA-RCRSLTAGFVKEKKEKGEDVELCIY--------------HENLD- 161
Query: 196 ECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSM 255
LL NL P V ++ L+ G+ + C Y++AR M
Sbjct: 162 ----LLEPGNLVPPG--------------------VFTLDGLIKYGEQYKQCPYFSARRM 197
Query: 256 ADDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLK 314
++ Y Y+++P I + ++ + +I++ DEAHNI+++ ++ S+D+ ED L K
Sbjct: 198 MQYCNVIIYSYHYLLDPKIAERVSKELSRDSIIVFDEAHNIDNVCIESLSIDLTEDSLRK 257
Query: 315 -------LQMELEQVCSVNPMI----YQPLIEMTQDLVGWIERRKATLAKREFQHFFSCW 363
L+ +++++ S + YQ L+E Q+ A A+ E Q +
Sbjct: 258 ASRGANNLERKIDEMKSTDAEKLQNEYQKLVEGLQE---------ADEAREEEQLMANPV 308
Query: 364 TGDKALRELQEANISR-QCFPILLECATKAIK---EATDTESELP-----HLSGMSVI-- 412
D L+E NI R + F L+ + +K + T T SE P HL ++ I
Sbjct: 309 LPDDLLKESVPGNIRRAEHFVAFLKRFIEYLKTRMKVTHTISETPLSFLSHLKDLTFIER 368
Query: 413 ---------------TLEGL-------FSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNP 450
TLE + + F + ++ + L L+ + + P
Sbjct: 369 KPLRFCAERLTSLVRTLELVNIEDYQPLQEVATFATLAATYEKGFLLILEPFESDTATVP 428
Query: 451 GGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVI 510
L CL+ A+ K V + S+I+TSGTLSP+ + LG F L+ + +
Sbjct: 429 NP----ILHFTCLDAAIAIKPVFDRFSSVIITSGTLSPLEMYPKMLG--FDAALQESYSM 482
Query: 511 DVDLQ-VLTSVISTGPDNYPLNASYK---------------------TADG-------YK 541
+ + L +++ G D +++S++ T DG Y
Sbjct: 483 TLARRSFLPMIVTRGSDQAQISSSFQIRNDPGVVRNYGNMLLEFCRITPDGVVVFFPSYL 542
Query: 542 LMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKR 601
ME + + W+ G + K + VE SQE + L+ Y + G ++ R
Sbjct: 543 YMESIISMWQGMGILDSVWNYKLILVETP-DSQES-SLALETYRTACCNGRGAVLLCVAR 600
Query: 602 VKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKY-NDTYRS 660
K D + + G R + +G+PF + + ++ + YR
Sbjct: 601 GKVSEGIDFD--------HHYG-------RAVLCIGVPFQYTESRILKARLEFLRENYR- 644
Query: 661 SKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSI 720
+ N++ A R Q +GR +R + DYG ++L D RFQ++RN+ + KW+ +++
Sbjct: 645 ----IRENDFLSFDALRHAAQCLGRVLRGKDDYGVMVLADRRFQKKRNQ--LPKWISQAM 698
Query: 721 KQYD---SFDASLEGLKSFFRDV 740
+ + S D ++ K F + +
Sbjct: 699 LESETNLSTDMAVATAKIFLKSM 721
>gi|426243940|ref|XP_004015798.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit [Ovis aries]
Length = 759
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 182/774 (23%), Positives = 305/774 (39%), Gaps = 148/774 (19%)
Query: 20 VGGIQVEFPYQ-PYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
V G+ V FPY Y Q +M + TLD H +LE P+GTGK++SLL +A+
Sbjct: 45 VDGLLVYFPYDYIYPEQFSYMLELKRTLD-----AKGHGVLEMPSGTGKTVSLLALIMAY 99
Query: 79 QQNCKLK-NQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKN 137
Q+ L+ +L S + P+ E V + L F + + +P +++ N
Sbjct: 100 QRAYPLEVTKLIYCSRTVPEIEKVIEELRKLLSFYEKQEGEKLPFLGLALSSR---KNLC 156
Query: 138 VKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEEC 197
+ ++TP F + + H T YVR +
Sbjct: 157 IHPEVTPLRFGKD------------------------VDGKCHSLTASYVRAQYQ----- 187
Query: 198 KLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMAD 257
D +L +F V G G +++++DL VG+ C Y+ AR
Sbjct: 188 ----RDSSLPHCRFYEEFDVHGRQVPLPTG---IYNLDDLKAVGRRQGWCPYFLARYSIL 240
Query: 258 DAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQ 316
A +V Y Y+++P I + ++ + A+++ DEAHNI+++ D+ SV++ L + Q
Sbjct: 241 HANVVVYSYHYLLDPKIADLVSKELARKAVVVFDEAHNIDNVCIDSMSVNLTRRTLDRCQ 300
Query: 317 MELE----QVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALREL 372
LE V Q L E + LV + R+A+ A+ H + D+ L+
Sbjct: 301 ANLETLQKTVLRYKETDEQRLREEYRRLVEGL--REASAARETDAHLANPVLPDEVLKGP 358
Query: 373 QEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHV 432
A L CA + ++ T E+ L+ S +TL F++L ++
Sbjct: 359 LIAPQPLGRSQPLRFCAER-LRSLLHT-LEISDLTDFSPLTLLANFATLV------STYA 410
Query: 433 SDYQLALQKYIKRDS--KNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMN 490
+ + ++ + R NP L C++ ++ K V E S+I+TSGTLSP++
Sbjct: 411 KGFTIIIEPFDDRTPTIANP------ILHFSCMDASLAIKPVFERFQSVIITSGTLSPLD 464
Query: 491 SFSSELG---VQFGT--------CLEAPHVIDV--DLQVLTSVISTGPD--------NYP 529
+ L V T CL P +I D ++S T D N
Sbjct: 465 IYPKILDFHPVTMATFTMTLARVCL-CPMIIGRGNDQVAISSKFETREDIAVIRNYGNLL 523
Query: 530 LNASYKTADG-------YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLK 582
L S DG Y+ ME W E G + K LF+E + G++ + L+
Sbjct: 524 LEMSAVVPDGIVAFFTSYQYMESTVASWYEQGILENIQRNKLLFIETQDGAETS--VALE 581
Query: 583 HYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPF-- 640
Y + G +GA L+V RGK+ GI F
Sbjct: 582 KYQEACENG------------------------------RGAILLSVARGKVSEGIDFVH 611
Query: 641 -----------PNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRH 689
P + LK + Y + + N++ A R Q +GR IR
Sbjct: 612 HYGRAVIMFGVPYVYTQSRILKARLE--YLRDQFQIRENDFLTFDAMRHAAQCVGRAIRG 669
Query: 690 RFDYGAIILLDERFQEERNRAHISKWLRKSIKQYD---SFDASLEGLKSFFRDV 740
+ DYG ++ D+RF R + +W+++ + + + D ++ K F R +
Sbjct: 670 KTDYGLMVFADKRFARADKRGKLPRWIQEHLTDANLNLTVDEGVQVAKYFLRQM 723
>gi|19173439|ref|NP_597242.1| ATP DEPENDENT DNA BINDING HELICASE (RAD3/XPD SUBFAMILY OF
HELICASES) [Encephalitozoon cuniculi GB-M1]
gi|19171028|emb|CAD26418.1| ATP DEPENDENT DNA BINDING HELICASE (RAD3/XPD SUBFAMILY OF
HELICASES) [Encephalitozoon cuniculi GB-M1]
Length = 619
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 161/691 (23%), Positives = 267/691 (38%), Gaps = 139/691 (20%)
Query: 57 ALLESPTGTGKSLSLLCSTLAWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQ 116
+ SPTGTGK++SLL + + + A+ + P A+ L GG
Sbjct: 27 GIFSSPTGTGKTMSLLSAVIDYIG--------ADEAGLDPRNRALEQALFQGG------- 71
Query: 117 PSTIPPSTNGQTAQVAMNNKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLA 176
+M + Y +RTH+Q++Q I+E KK VL
Sbjct: 72 ------------------------RMK--VLYCTRTHTQLTQAINELKKLEAGCNSVVLG 105
Query: 177 SRKHYCTNKYV---RDKENIDEECKLLLGDRNL----GCPQFKNVHKVRGHPSLQKGGCH 229
SR+ YC N+ V R + ++E CK + + GC F H
Sbjct: 106 SRRIYCLNERVCQNRSSDAVNEGCKEAVKEGLCVFYDGCDLFDG---------------H 150
Query: 230 EVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILIL 289
V D+EDLV +G+ R C YY ++ + +VF PY + R +M++D++ +I+++
Sbjct: 151 GVLDVEDLVAMGRNERLCPYYVSKRYSQQCDIVFLPYQLLFAREGRKSMDIDVRESIVVV 210
Query: 290 DEAHNIEDIARDAGSVDIDEDVLLKLQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKA 349
DEAHNI D V ++ +L M C +Y+ G +E
Sbjct: 211 DEAHNIYD-----SVVQMNTACILFSTM---NRCIKAMQLYRERHGRRMKREGQLETVVE 262
Query: 350 TLAKREFQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGM 409
L R + F GD+ ++ E LL+ I++ E E
Sbjct: 263 IL--RRIKGF-----GDEYCEDVGEGEGVMGVSEFLLK---AGIEDFNMLEVE------- 305
Query: 410 SVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVF 469
I G+F L F S + + L D + + L+ ++ F
Sbjct: 306 DYIVTSGIFRRLEGFGSNPSLQIPEISKFLGLLTVSDRSGRIFYSSRGVRFTPLDASMYF 365
Query: 470 KDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYP 529
+DV E +++L GT+ P++ S LG + V + L V+ +GP
Sbjct: 366 EDVLECR-ALLLAGGTMEPVDQLMSVLGKKSPRYFSYGSVCN---DFLALVVGSGPSGRE 421
Query: 530 LNASYKT-------ADGYKLMEKLCNRWRETGQWSRLNAKKPL---------FVEPKGGS 573
+ +++T D + L N ++ G L +K L V K
Sbjct: 422 IIVNFETRERPESIKDVTSSISNLSNAVKDGGMVCFLPSKAYLGILRERCGDMVGTKKAL 481
Query: 574 QEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGK 633
ED I + Y +G EG N + +CR
Sbjct: 482 YEDL-ITFEGYAEEAGRGPCILFAVMGGRLSEGVNFGD----------------GLCRLL 524
Query: 634 IVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDY 693
+VVG+P+P D+++ + K+N G E+ + A R +NQ +GR +RHR DY
Sbjct: 525 VVVGVPYPT-QDLELKERAKFN-----------GGEYATSIAMRTVNQTLGRALRHRNDY 572
Query: 694 GAIILLDERFQEERNRAHISKWLRKSIKQYD 724
++LLD+R+ + +S W+R+ + D
Sbjct: 573 AVLVLLDKRYIQLSR--LVSPWIREKVVHCD 601
>gi|50312507|ref|XP_456289.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74636409|sp|Q6CIF0.1|CHL1_KLULA RecName: Full=ATP-dependent RNA helicase CHL1; AltName:
Full=Chromosome loss protein 1
gi|49645425|emb|CAG98997.1| KLLA0F27181p [Kluyveromyces lactis]
Length = 807
Score = 131 bits (329), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 155/635 (24%), Positives = 274/635 (43%), Gaps = 91/635 (14%)
Query: 137 NVKKKMTPTIFYASRTHSQISQVISEYKKTAY----------RVPMAVLASRKHYCTNKY 186
N++ K I+++SRTHSQ++Q S+ ++ R+ LASRK C +
Sbjct: 194 NMELKSPLKIYFSSRTHSQLTQFASQLTLPSFPPSSPTLEKERIKFLPLASRKQLCIHAK 253
Query: 187 VRDKEN--IDEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVV 244
V ++ I++ C + + C + N + + E+ DIEDLV +G +
Sbjct: 254 VSKLKSDLINDACVETVKRQE--CQFYTNSRDLISSKQFRDYTFSEISDIEDLVQLGHSL 311
Query: 245 RGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGS 304
C YY++R+ + A++V PY +I++ IR ++ +++K +I+I+DEAHN+ D S
Sbjct: 312 HVCPYYSSRTALEGAEIVTLPYQHILSFEIRESLGINLKDSIVIIDEAHNLMDTITSIYS 371
Query: 305 VDID-EDV----------LLKLQMELEQVCSVNPMIYQPLIEMTQDLV-GWIERRKATLA 352
+I D+ L K + +L VN M L+++ Q + E+ K
Sbjct: 372 CEISLSDIKICKKLMKIYLNKFKRKLNGKNRVNIMKLMKLLDILQAFIESHFEKGKEISP 431
Query: 353 KREFQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTES-ELPHLSGMS- 410
+ F+ + L S+ + I +K + ++T S + P L +S
Sbjct: 432 QSMFRDSNADLLNIHELVTYMRG--SKIAYKIDSYADSKLKSDESNTNSVKQPILFKISK 489
Query: 411 -VITLEGLFSSLTYFFSRNGSHVSDYQLA----LQKYIKRDSK---NPGGNWTHTLS-LW 461
V++L ++FF + Y L + K I DSK GG T +
Sbjct: 490 FVLSLSNPSFEGSFFFEE--GMIIKYMLLEPNQIFKTIVNDSKCVILAGGTMQPTSEFIE 547
Query: 462 CLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFG---------TCLEAPHVIDV 512
L P V KD+ + S + I+ L ++F G F C ++++
Sbjct: 548 NLLPFVPSKDIVQFSCNHIIPESNL---DTFIVSEGFNFNYESRNNESVMCKLYDFLLEL 604
Query: 513 DLQVLTSVISTGPDNYPLNASYKTADGYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGG 572
+V ++ P Y +E + W+ + +L+ K +F E GG
Sbjct: 605 GCRVPHGIVVFFP-------------SYGYLEHVIKFWQLEEIFEKLSMNKRIFYETPGG 651
Query: 573 SQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRG 632
S +L Y ++I K A + G I Q+N + R
Sbjct: 652 SD-----ILPQYSSTILDKKKGAFL----FSVVGGKLSEGINFQDN----------LARA 692
Query: 633 KIVVGIPFPNINDIQVSLKKKYNDTYRSS-----KNLLSGN-EWYCNQAFRALNQAIGRC 686
++VG+P+PN+ ++ +KK++ + S K+ S E+Y N +A+NQ+IGR
Sbjct: 693 VVMVGLPYPNLYSSELLVKKRHIEQKVISAGGSLKDAKSATIEFYENICMKAVNQSIGRA 752
Query: 687 IRHRFDYGAIILLDERFQEERNRAHISKWLRKSIK 721
IRH DY I L+D R+ + + +S+W+RK +K
Sbjct: 753 IRHANDYACIYLVDNRYLNNKVQHKLSEWVRKRVK 787
Score = 55.8 bits (133), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 22 GIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQN 81
G PYQPY Q M + L+ ++ G + ESPTGTGK+LSL+CST+ W +
Sbjct: 2 GKNFHHPYQPYDIQTQLMEHIYELLNSGKKVG----IFESPTGTGKTLSLICSTVTWLRE 57
Query: 82 CKLK 85
KL+
Sbjct: 58 HKLE 61
>gi|453084907|gb|EMF12951.1| DNA repair helicase RAD3 [Mycosphaerella populorum SO2202]
Length = 806
Score = 131 bits (329), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 186/858 (21%), Positives = 343/858 (39%), Gaps = 181/858 (21%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+ +G + V FPY + Y Q +MC + TLD GHC +LE P+GTGK++SLL +
Sbjct: 3 FFIGDLPVLFPYPRIYPEQYAYMCDLKHTLDAG---GHC--VLEMPSGTGKTVSLLSLIV 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNK 136
A+QQ+ +L S + + E L + + G T++ K
Sbjct: 58 AYQQHYPEHRKLIYCSRTMSEIEKALAELKALMKYRADQLGVVEDFRGLGLTSR-----K 112
Query: 137 NVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE 196
N+ + P++ R S +V+ +R T +V++K+ E+
Sbjct: 113 NL--CLHPSV---KREKSG-----------------SVVDARCRSLTAGFVKEKKERGED 150
Query: 197 CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMA 256
L C N+ + H + G V ++ ++ G+ + C Y+ AR M
Sbjct: 151 VDL--------CIYHDNLDLLEPHNLIPPG----VWTLDGMLRYGEEQKQCPYFTARRMM 198
Query: 257 DDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLKL 315
++ Y Y+++P I + ++ K I++ DEAHNI+++ ++ S+D+ ED L K
Sbjct: 199 PFCNVIIYSYHYLLDPKIAERVSRELSKDCIVVFDEAHNIDNVCIESLSIDLTEDSLRKA 258
Query: 316 QMELEQV-CSVNPMIYQPLIEMTQDLVGWIE-RRKATLAKREFQHFFSCWTGDKALRELQ 373
E + + M ++ + +E R+A A+ E + D L+E
Sbjct: 259 ARGAENLDRKIKEMKDTDAEKLQNEYAKLVEGLREADTARDEGAFMSNPALPDDLLKEAV 318
Query: 374 EANISR--------QCFPILLECATKAIKEATDT-ESELPHLSGMSVITLEGL------- 417
NI R + F L+ K + ++T S L HL ++ I + L
Sbjct: 319 PGNIRRAEHFTAFLKRFIEYLKTRMKVLHVISETPPSFLQHLKELTFIEKKPLRFCAERL 378
Query: 418 -----------------FSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSL 460
+ F + ++ + + L L+ Y + P L
Sbjct: 379 TSLVRTLELTNIEDYQPLQEVATFATLAATYDTGFLLILEPYESDTATVPNP----VLHF 434
Query: 461 WCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQ-VLTS 519
CL+ A+ K V E S+I+TSGT+SP+ + LG F ++ + + + + L
Sbjct: 435 TCLDAAIAIKPVFERFSSVIITSGTISPLEMYPKMLG--FSAVVQESYAMTLARRSFLPM 492
Query: 520 VISTGPDNYPLNASYK---------------------TADG-------YKLMEKLCNRWR 551
+++ G D +++ ++ T DG Y ME + + W+
Sbjct: 493 IVTRGSDQNQISSGFQTRSDPANIRNYGNLIIEFSKLTPDGIVVFFPSYLYMESVISMWQ 552
Query: 552 ETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLN 611
G ++ K + VE SQE + L+ Y + S G
Sbjct: 553 SMGILDQVWKSKLILVETP-DSQET-SLALETYRTACSNG-------------------- 590
Query: 612 TIESQENANKKGASFLAVCRGKI---------------VVGIPFPNINDIQVSLKKKY-N 655
+GA L V RGK+ +G+PF + + ++
Sbjct: 591 ----------RGAVLLCVARGKVSEGIDFDHHYGRTVLCIGVPFQYTESRILKARLEFLR 640
Query: 656 DTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKW 715
+TYR + N++ A R Q +GR +R + DYG +++ D+RF ++RN+ + KW
Sbjct: 641 ETYR-----IRENDFLSFDAMRHCAQCLGRVLRGKDDYGIMVMADKRFAKKRNQ--LPKW 693
Query: 716 LRKSIKQYD---SFDASLEGLKSFFRDVKGWVGKKMFNGLE--NSDNDVDHVSSMDQCKE 770
+ + + D S D ++ K F + + M +G+ + ++ + H Q K
Sbjct: 694 ISGEMMESDSNMSVDQAVAAAKRFLKQMSKPFPASMQDGISTWSYEDLLAH-----QAKL 748
Query: 771 VTKQNTQELNKSDHSGQN 788
Q +EL +++G++
Sbjct: 749 KANQMREELENGEYNGEH 766
>gi|398396458|ref|XP_003851687.1| DNA repair helicase [Zymoseptoria tritici IPO323]
gi|339471567|gb|EGP86663.1| hypothetical protein MYCGRDRAFT_43883 [Zymoseptoria tritici IPO323]
Length = 801
Score = 130 bits (326), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 193/863 (22%), Positives = 346/863 (40%), Gaps = 207/863 (23%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+ + + V FPY + Y Q +MC + TLD GHC +LE P+GTGK++SLL +
Sbjct: 3 FFIEDLPVLFPYPRIYPEQYAYMCDLKRTLDSG---GHC--VLEMPSGTGKTVSLLSLIV 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNK 136
A+QQ F PE +
Sbjct: 58 AYQQ------------------------------FYPEHR-------------------- 67
Query: 137 NVKKKMTPTIFYASRTHSQISQVISEYKK-TAYRVPMAV---------LASRKHYCTNKY 186
+ Y SRT S+I + ++E K YR L SRK+ C +
Sbjct: 68 --------KLIYCSRTMSEIEKALAELKALMKYRADQLGEVEDFRGLGLTSRKNLCLHPS 119
Query: 187 VRDKEN---IDEECKLLLG-----------DRNLGCPQFKNVHKVRGHPSLQKGGCHEVH 232
V+ +++ +D C+ L D +L C N+ + H + G V
Sbjct: 120 VKREKSGSVVDSRCRSLTAGFVKEKKERGEDVDL-CIYHDNLDLLEPHNLIPPG----VW 174
Query: 233 DIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDE 291
++ ++ G+ + C Y+ AR M ++ Y Y+++P I + ++ K I++ DE
Sbjct: 175 TLDGMLRYGEQQKQCPYFTARRMMPFCNVIIYSYHYLLDPKIAERVSKELSKDCIVVFDE 234
Query: 292 AHNIEDIARDAGSVDIDEDVLLKLQM---ELEQVCSVNPMIYQPLIEMTQDLVGWIE-RR 347
AHNI+++ ++ S+D+ ED L K LE+ + M ++ + +E R
Sbjct: 235 AHNIDNVCIESLSIDLTEDSLRKAARGASNLER--KITEMKDTDAEKLQNEYAKLVEGLR 292
Query: 348 KATLAKREFQHFFSCWTGDKALRELQEANISR--------QCFPILLECATKAIKEATDT 399
+A A+ E + D L+E NI R + F L+ K + ++T
Sbjct: 293 EADEARDEGAFMSNPALPDDLLKEAIPGNIRRAEHFTAFLKRFIEYLKTRMKVLHVISET 352
Query: 400 -ESELPHLSGMSVITLEGL------FSSLTYFFSRNGSHVSDYQ---------------- 436
S L HL ++ I + L +SL + S++ DYQ
Sbjct: 353 PPSFLQHLKELTFIEKKPLRFCAERLTSLVR--TLELSNIEDYQPLQEVATFATLVATYD 410
Query: 437 ----LALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSF 492
L L+ Y + P L CL+ A+ K V + S+I+TSGT+SP+ +
Sbjct: 411 TGFLLILEPYESDTATVP----NPILHFTCLDAAIAIKPVFDRFSSVIITSGTISPLEMY 466
Query: 493 SSELGVQFGTCLEAPHVIDVDLQ-VLTSVISTGPDNYPLNASYK---------------- 535
LG F ++ + + + + L +++ G D +++ ++
Sbjct: 467 PKMLG--FTAVVQESYAMTLARRSFLPMIVTRGSDQGQMSSGFQTRSDPGNIRNYGALII 524
Query: 536 -----TADG-------YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKH 583
T DG Y ME + + W+ G ++ K + VE SQE + L+
Sbjct: 525 EFSKLTPDGIVVFFPSYLYMESVISMWQGMGILDQVWKSKLILVETP-DSQET-SLALET 582
Query: 584 YYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNI 643
Y + S G ++ R K D + + G R + +G+PF
Sbjct: 583 YRTACSNGRGAVLLCVARGKVSEGIDFD--------HHYG-------RTVLCIGVPFQYT 627
Query: 644 NDIQVSLKKKY-NDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDER 702
+ + ++ +TYR + N++ A R Q +GR +R + DYG +++ D+R
Sbjct: 628 ESRILKARLEFLRETYR-----IRENDFLSFDAMRHCAQCLGRVLRGKDDYGVMVMADKR 682
Query: 703 FQEERNRAHISKWLRKSIKQYD---SFDASLEGLKSFFRDVKGWVGKKMFNGLE--NSDN 757
F + R + KW+ ++ + D S D ++ K F +++ K+ +G+ + ++
Sbjct: 683 FA--KKRTQLPKWIGSAMMESDANMSVDQAVAAAKKFLKNMSKPFPAKLQDGISTWSYED 740
Query: 758 DVDHVSSMDQCKEVTKQNTQELN 780
++H Q K+ ++ QELN
Sbjct: 741 LMEH-----QSKQHAQEKLQELN 758
>gi|253742830|gb|EES99497.1| TFIIH basal transcription factor complex helicase subunit [Giardia
intestinalis ATCC 50581]
Length = 1060
Score = 130 bits (326), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 144/313 (46%), Gaps = 58/313 (18%)
Query: 460 LWCLNPAVVFKDV--AELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVL 517
L C+ P + K + E S+ILTSGTL+P ++ +ELG+ FG + PH++ L
Sbjct: 613 LLCMTPQSILKTIIMGERVRSVILTSGTLAPFSALQAELGLPFGVSISCPHIVPSS-NYL 671
Query: 518 TSVISTGPDNYPLNASYKTADG----------------------------YKLMEKLCNR 549
VI TG PL +Y + YK M ++ +
Sbjct: 672 FRVI-TGTTGAPLLGTYTHRESGSYQRLLGYALQVCVRGVIGGTLVFFSSYKYMAQVLDS 730
Query: 550 WRETGQWSRLNA-----KKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKR 604
W+ G + L + + LFVEP Q+D +IV+K Y +S + G + R K
Sbjct: 731 WKTDGTEAALRSGAHGDSRDLFVEPV--RQQDCDIVVKKYKDSCNAGGCPILFVVCRGKL 788
Query: 605 EGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYNDTYRSSKNL 664
D + CR +V+ +P+PNI+D + K + D + +
Sbjct: 789 AEGIDFSN---------------NYCRCALVISLPYPNISDPLLKAKMDWLDKHSA---- 829
Query: 665 LSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYD 724
L G +WY A+R++NQA+GR +RH+ DYG + LLD+R+ E +R +S WL + +
Sbjct: 830 LKGGDWYSVHAYRSVNQALGRVLRHKDDYGCMFLLDQRYSTEASRKQLSGWLADHLVSVE 889
Query: 725 SFDASLEGLKSFF 737
++S++ K F
Sbjct: 890 LSESSVQKEKVFM 902
Score = 123 bits (308), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 105/351 (29%), Positives = 161/351 (45%), Gaps = 66/351 (18%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ G++ +FP++PY SQ+ +M +I+ L+ G +ALLESPTGTGK+LSLL LA+Q
Sbjct: 7 IKGVEFQFPFEPYPSQIEYMNSLITALN-----GKENALLESPTGTGKTLSLLIPALAYQ 61
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIP-ESQPSTIPPSTNG---------QTA 129
+ C LAN + T N FI ++ PS I S G QT
Sbjct: 62 ERCISFLSLANSLERRHKTS------TNMSEFIKIQNAPSNISLSHAGAKELLEWACQTF 115
Query: 130 Q----VAMNNKN-----------VKKKMTPTIFYASRTHSQISQVISEYKK--------- 165
VAM+ + V ++ P I YA+RTH+QI Q I + KK
Sbjct: 116 DFRDCVAMDARLGTMSLNSTARWVVEQPPPKILYAARTHAQIEQAIKQLKKHVEVISSVP 175
Query: 166 ----TAYRVPMAVLASRKHYCTNKYVRDKE-----NIDEECKLLLGDRNLGCPQFKN--- 213
++ P+A+L SR+ +C N+ +D CK + DR C +
Sbjct: 176 ADTNSSLSWPIAMLGSRRVFCINERTHTYAAAANITLDMACKKVCDDRQ--CRYYFGEGD 233
Query: 214 ----VHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYI 269
K R + +G + D+ED + + C YY R++ A+++ PY+YI
Sbjct: 234 GEAVAQKYRQY--YYEGSNERLDDLEDFLGYCKNESRCPYYLGRALVPQAKIITTPYNYI 291
Query: 270 INPVIRGAMEVD-IKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMEL 319
++ R A D + +IL++DE HNI D S I + LL+ E+
Sbjct: 292 LSSKSRTAELCDMLNNSILLIDEGHNIGQACCDVFSSSIAVNTLLEATNEI 342
>gi|350400679|ref|XP_003485920.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit-like [Bombus impatiens]
Length = 777
Score = 130 bits (326), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 174/798 (21%), Positives = 305/798 (38%), Gaps = 198/798 (24%)
Query: 20 VGGIQVEFPYQ-PYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
V G+ V FPY Y Q +M + LD GHC LLE P+GTGK+++LL +A+
Sbjct: 23 VDGLLVYFPYDYIYPEQYAYMLELKRGLDAK---GHC--LLEMPSGTGKTITLLSLIVAY 77
Query: 79 QQNCKLK-NQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKN 137
L +L S + P+ E V + L + + S P G
Sbjct: 78 MLENPLDVTKLIYCSRTVPEIEKVIEELKKLMDYYEKETESK--PKIVG----------- 124
Query: 138 VKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEEC 197
+ +SR + I +S ++ ++ R H T YVR++ N DE
Sbjct: 125 --------LVLSSRKNMCIHPEVSREREGK------IVDGRCHSLTASYVRERHNYDEST 170
Query: 198 KLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMAD 257
+ C F + G G ++ I+DL G+ C Y+ AR
Sbjct: 171 PI--------C-NFYEGFDMEGKEQFMPPG---IYSIDDLKEYGRDRNWCPYFLARFTIL 218
Query: 258 DAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDID-------- 308
AQ+V Y Y+++P I + ++ K ++++ DEAHNI+++ D+ SV I+
Sbjct: 219 HAQIVVYSYHYLLDPKIAETVSKELSKSSVVVFDEAHNIDNVCIDSMSVKINRRTLEKSS 278
Query: 309 --------------EDVLLKLQMELEQVCS---------------VNPMIYQPLIEMT-- 337
ED + KL+ E E++ NP++ +++
Sbjct: 279 ANIQLLEKTVAEMREDDVNKLKEEYERLVEGLKDAHVARETDIILANPVLPDEILQEVVP 338
Query: 338 ------QDLVGWIERRKATLAKR-EFQHFFSCWTGDKALRELQ-EANISRQCFPILLECA 389
+ VG++ R L R QH + LR++Q + +I R+ E
Sbjct: 339 GNIRNAEHFVGFLRRFVEYLKTRLRVQHVVQ-ESPAAFLRDVQTKVSIERKPLRFCAERL 397
Query: 390 TKAIKEATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKN 449
++ E+ L+ S + L +T+ + ++ + + ++ + D K
Sbjct: 398 ASLLRTM-----EITDLTDFSPVIL------VTHLATLVSTYTKGFTIIVEPF---DDKT 443
Query: 450 PGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQ------FGTC 503
P L CL+ ++ K + + S+++TSGTLSP++ + L F
Sbjct: 444 PNV-LNPILHFVCLDSSIAIKPIFDRFQSVVITSGTLSPLDMYPKILNFHPVIMSSFTMT 502
Query: 504 LEAPHVIDVDLQVLTSVISTGPDNYPLNASYKT---------------------ADG--- 539
L P +L +++ G D +++ Y+T DG
Sbjct: 503 LARP-------CLLPMIVAKGNDQVAISSKYETREDVAVIRNYGQLLVEFAATVPDGLVC 555
Query: 540 ----YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCA 595
Y ME + W + G +L K LF+E + ++ ++
Sbjct: 556 FFTSYLYMESVVAAWYDQGVVDQLQRHKLLFIETQDSAETSLALI--------------- 600
Query: 596 VVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPF-------------PN 642
N I + EN +GA L+V RGK+ G+ F P
Sbjct: 601 ---------------NYIRACENG--RGAVLLSVARGKVSEGVDFDHHLGRAVLMFGIPY 643
Query: 643 INDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDER 702
+ LK + Y + + N++ A R Q +GR IR + DYG ++ D+R
Sbjct: 644 VYTQSRILKARLE--YLRDQFQIRENDFLTFDAMRHAAQCVGRAIRGKTDYGIMVFADKR 701
Query: 703 FQEERNRAHISKWLRKSI 720
F R+ + KW+++ +
Sbjct: 702 FSRMDKRSKLPKWIQEHL 719
>gi|327351176|gb|EGE80033.1| DNA repair helicase RAD3 [Ajellomyces dermatitidis ATCC 18188]
Length = 773
Score = 130 bits (326), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 181/774 (23%), Positives = 324/774 (41%), Gaps = 153/774 (19%)
Query: 39 MCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCKLKNQLANISHSKPDT 98
MC + TLD GHC +LE P+GTGK++SLL +A+QQ+ + +L S + +
Sbjct: 1 MCDLKKTLDAG---GHC--VLEMPSGTGKTVSLLSLIIAYQQHRPEQRKLIYCSRTMSEI 55
Query: 99 EAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKKMTPTIFYASRTHSQISQ 158
E L + +T Q+ +T SR + +
Sbjct: 56 EKALAELKALMKY---------------RTRQLGYAEDFRGLGLT------SRKNLCLHP 94
Query: 159 VISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEECKLLLGDRNLGCPQFKNVHKVR 218
+ K AV+ +R T +V++K+ E+ +L + NL + N+
Sbjct: 95 SVKREKSG------AVVDARCRSLTAGFVKEKKERGEDVELCIYHENLDLLEPSNL---- 144
Query: 219 GHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAM 278
+ G V ++D++ G+ + C Y++ R M ++ Y Y+++P I +
Sbjct: 145 ----VPPG----VFTLDDIIKYGEQHKQCPYFSIRRMMPFCNVIIYSYHYLLDPKIAERV 196
Query: 279 EVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLK-------LQMELEQVCSVNPMIY 330
++ K +I++ DEAHNI+++ ++ S+D+ ED L K L+ ++E++ S +
Sbjct: 197 SQELSKDSIVVFDEAHNIDNVCIESLSIDLTEDSLRKASRGATNLERKIEEMKSSDA--- 253
Query: 331 QPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRELQEANISR-QCFPILLECA 389
+ L Q LV + R+A A++E Q + D L+E NI R + F L+
Sbjct: 254 EKLQNEYQKLVEGL--READEARQEEQLMANPALPDDLLKEAVPGNIRRAEHFVAFLKRF 311
Query: 390 TKAIK---EATDTESELP-----HLSGMSVI-----------------TLEGL------- 417
+ +K + T T SE P HL ++ I TLE +
Sbjct: 312 IEYLKTRMKITHTISETPLSFLAHLKDLTFIERKPLRFCAERLASLVRTLELMNLEDYQP 371
Query: 418 FSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSL 477
+ F + ++ + L L+ + + P L CL+ A+ K V +
Sbjct: 372 LQQVAAFATLAATYEKGFLLILEPFESETATVPNP----ILHFTCLDAAIAIKPVFDRFS 427
Query: 478 SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQ-VLTSVISTGPDNYPLNASYK- 535
S+I+TSGTLSP+ + L +F T L+ + + + + L V++ G D +++S++
Sbjct: 428 SVIVTSGTLSPLEMYPKML--KFTTVLQESYTMTLARRSFLPMVVTRGSDQAQISSSFQI 485
Query: 536 --------------------TADG-------YKLMEKLCNRWRETGQWSRLNAKKPLFVE 568
T DG Y ME + + W+ G + K + VE
Sbjct: 486 RNDPGVVRNYGNLLLEFSRITPDGIVVFFPSYLYMESIISMWQGMGILDLVWNYKLILVE 545
Query: 569 PKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLA 628
SQE + L+ Y + G ++ R K D + + G
Sbjct: 546 TP-DSQES-SLALETYRTACCNGRGAVLLCVARGKVSEGIDFD--------HHYG----- 590
Query: 629 VCRGKIVVGIPFPNINDIQVSLKKKY-NDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCI 687
R I +G+PF + + ++ + YR + N++ A R Q +GR I
Sbjct: 591 --RAVICIGVPFQYTESRILKARLEFLRENYR-----IRENDFLSFDAMRHAAQCLGRVI 643
Query: 688 RHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYD---SFDASLEGLKSFFR 738
R + DYG ++L D RFQ + R+ + KW+ +++ + + S D ++ KSF R
Sbjct: 644 RGKDDYGVMVLADRRFQ--KRRSQLPKWISQAMLESETNLSTDMAVATAKSFLR 695
>gi|213402977|ref|XP_002172261.1| DNA repair helicase RAD3 [Schizosaccharomyces japonicus yFS275]
gi|212000308|gb|EEB05968.1| DNA repair helicase RAD3 [Schizosaccharomyces japonicus yFS275]
Length = 773
Score = 130 bits (326), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 187/827 (22%), Positives = 326/827 (39%), Gaps = 198/827 (23%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+++ + V FPY + Y Q +MC + +LD ALLE P+GTGK++SLL +
Sbjct: 3 FYIDDLPVIFPYPRIYPEQYQYMCDLKKSLDVGG-----VALLEMPSGTGKTISLLSLII 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNK 136
++QQ F PE +
Sbjct: 58 SYQQ------------------------------FYPEQR-------------------- 67
Query: 137 NVKKKMTPTIFYASRTHSQISQVISEYKK-TAYRV-------PMAVLA--SRKHYCTNKY 186
+ Y SRT S+I + ++E K+ AYR P L SRK+ C +
Sbjct: 68 --------KLIYCSRTMSEIDKALAELKRLMAYREKELGRREPFLGLGLTSRKNLCLHPS 119
Query: 187 VRDKEN---IDEECKLL----LGDRNLG------CPQFKNVHKVRGHPSLQKGGCHEVHD 233
VR ++N +D C+ L + ++ L C +N+ + H + +G V
Sbjct: 120 VRREKNGNVVDARCRALTAGFVKEKKLAGMDVELCDFHENLEDLEPHALVPEG----VWT 175
Query: 234 IEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEA 292
++DL GQ C Y++AR M ++ Y Y+++P I + ++ K I++ DEA
Sbjct: 176 LDDLTEYGQKTTRCPYFSARRMLPFCNVIIYSYHYLLDPKIAERVSRELSKDCIVVFDEA 235
Query: 293 HNIEDIARDAGSVDIDEDVLLKLQMEL----EQVCSVNPMIYQPLIEMTQDLVGWIERRK 348
HNI+++ ++ S+D+ E L K + +V V + L + + LV + R+
Sbjct: 236 HNIDNVCIESLSIDLTESSLRKASRGITALERKVAEVKQVDAGKLQDEYRKLVQGL--RE 293
Query: 349 ATLAKREFQHFFSCWTGDKALRELQEANISR--------QCFPILLECATKAIKEATDT- 399
A A +E Q + + L+E NI R + F L+ K + +T
Sbjct: 294 ADEASQEQQFMSNPVLPEDVLKEAVPGNIRRAEHFIAFLKRFIEYLKTRMKVLYVIAETP 353
Query: 400 ESELPHLSGMSVITLEGL---------------------FSSL---TYFFSRNGSHVSDY 435
S L H+ ++ I + L F SL F + ++ +
Sbjct: 354 ASFLQHMKDLTFIERKPLRFCAERLTSLVRTLELPIVDDFHSLQQIATFATLVATYERGF 413
Query: 436 QLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSE 495
L L+ Y ++ P L CL+ ++ K V + S+I+TSGTLSP+N +
Sbjct: 414 VLILEPYETENATVPNP----VLHFACLDASIAIKPVFDKFRSVIITSGTLSPLNMYPKM 469
Query: 496 LGVQFGTCLEAPHVIDVDL-QVLTSVISTGPDNYPLNASYK------------------- 535
L QF T + + + + L VI+ G D +++ ++
Sbjct: 470 L--QFETVMMESYGMSLARNSFLPMVITRGSDQVAISSKFEARNDPSIVRNYGNILIEFS 527
Query: 536 --TADG-------YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYN 586
T DG Y +E + + W+ G + K + VE + + L+ Y
Sbjct: 528 KTTPDGLVAFFPSYLYLESIVSSWQSMGILDEVWKYKLILVETPDAQETT--LALETYRA 585
Query: 587 SISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDI 646
+ G ++ R K D + ++ G R I+ GIP+
Sbjct: 586 ACCNGRGAVLLSVARGKVSEGVDFD--------HQYG-------RTVIMFGIPYQYTESR 630
Query: 647 QVSLKKKY-NDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQE 705
+ + ++ DTY+ + N++ A R Q +GR +R + D G ++L D+R+
Sbjct: 631 ILKARLEFLRDTYQ-----IRENDFLTFDAMRHAAQCLGRVLRGKDDSGIMVLADKRYGR 685
Query: 706 ERNRAHISKWLRKSIKQYDSFDASLEGLKSFFRDVKGWVGKKMFNGL 752
R+ + KW I+QY S EG + D+ + KK +
Sbjct: 686 SDKRSKLPKW----IQQYTS-----EGAANLSTDMAVALAKKFLRTM 723
>gi|212545032|ref|XP_002152670.1| DNA helicase, putative [Talaromyces marneffei ATCC 18224]
gi|210065639|gb|EEA19733.1| DNA helicase, putative [Talaromyces marneffei ATCC 18224]
Length = 887
Score = 129 bits (325), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 175/725 (24%), Positives = 287/725 (39%), Gaps = 194/725 (26%)
Query: 146 IFYASRTHSQISQVISEYKKTAY-----------------------RVPMAVLASRKHYC 182
I+Y SRTHSQ+SQ E ++ + L SRK C
Sbjct: 222 IYYCSRTHSQLSQFAQELRRVNLPSSLPSLQESAEGEKQEHTELEEVIKHLTLGSRKQLC 281
Query: 183 TNKYVRDKEN---IDEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGG---------CHE 230
N V + N I+E C L + G K + P+ + G
Sbjct: 282 INPRVSNLGNATAINERCMEL---QQSGVAADKRCSYL---PTKESEGMLFDFRDRVLST 335
Query: 231 VHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILD 290
V DIED+ VG+ + C YYAAR D +++ PY ++ R A+++ ++ I+I+D
Sbjct: 336 VQDIEDISQVGKQLAICPYYAARKAIDQCEIITLPYPLLLQRSSREALDLSLRDHIVIID 395
Query: 291 EAHNIEDIARDAGSVDIDEDVLLKLQMELEQVCSV-----------NPMIYQPLIEMT-- 337
EAHN+ D + SV + L +L+ L Q+ + N + +I +
Sbjct: 396 EAHNLMDAISNLHSVSV---TLEQLRTSLFQLTTYARKFQTRLKGKNRVYVTQVIRLVSA 452
Query: 338 --QDLVGWIERRKATLAKREFQHFFSCWTGD-----KALRELQEANISRQCFPILLECAT 390
++L ++ K++ ++ S D K R LQE+ ++R+ +
Sbjct: 453 LAENLQSLSDKHKSSEVIVQYSDLVSGKGVDQINPYKLTRYLQESKLARKVDGYVENANN 512
Query: 391 KAIK----EATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRD 446
+ K +AT + +P L + L + S + QL L
Sbjct: 513 QDGKVNNGKATRENTTIPVLFQVQSFILTLMNPS------------DEGQLFL------- 553
Query: 447 SKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSEL---------- 496
+K GG L L+P F+D+ + + ++IL GT+SPM+ +S L
Sbjct: 554 NKADGGVL---LRYLLLDPTSHFRDIVDEARTVILAGGTMSPMSDYSDHLFSYVSPEKLD 610
Query: 497 GVQFGTCLEAPHVI---DVDLQVLTSVISTGPDNYPL-----------------NASYKT 536
FG HVI ++ ++LT + N+ N
Sbjct: 611 TYSFG------HVIPPKNLTARILTKGVLGSDFNFTFDQRNSDSMITDLGQTIANICAVI 664
Query: 537 ADG-------YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSIS 589
DG Y + ++ N WR KP GG+ F + K+
Sbjct: 665 PDGVVVFFPSYDYLNQVLNAWR-----------KP---NKTGGAVSIFAEIEKY------ 704
Query: 590 QGSKCAVVRKKRVKREGNNDLNTIE-SQENANKKGASFLAVC---------------RGK 633
K V K+E N D +E S++ + GA L+V RG
Sbjct: 705 ---KPIVYESNNHKKESNTDDTLLEYSKKVESGSGALLLSVVGGRLSEGINFSDKLGRGV 761
Query: 634 IVVGIPFPNIN-----------DIQVSLKKKYNDT------YRSSKNLL--SGNEWYCNQ 674
++VG+PFPNI+ + Q K N+T R ++ +G +++ N
Sbjct: 762 LIVGLPFPNIHSAVWKAKIGHIEKQTYAKLTQNETELPVSRRREAETAAKAAGRDFFENS 821
Query: 675 AFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEG-L 733
RA+NQ IGR IRHR DY AI+L+D R++ +R + + W+R+S+ S +++ G L
Sbjct: 822 CMRAVNQCIGRAIRHRNDYAAIVLIDRRYETQRIQGKLPTWIRQSLAS--SATSNIRGDL 879
Query: 734 KSFFR 738
SFF+
Sbjct: 880 ISFFK 884
Score = 45.8 bits (107), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 35/66 (53%), Gaps = 7/66 (10%)
Query: 28 PYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTG--TGKSLSLLCSTLAWQQNCKLK 85
PY PY QL FM + ++ + + ESPTG GKSLSL+C L W ++ K K
Sbjct: 13 PYTPYDIQLQFMSSLYDCIEAGKV-----GIFESPTGPCQGKSLSLICGALTWLRDHKRK 67
Query: 86 NQLANI 91
L +I
Sbjct: 68 EFLKSI 73
>gi|254569252|ref|XP_002491736.1| 5' to 3' DNA helicase, involved in nucleotide excision repair and
transcription [Komagataella pastoris GS115]
gi|238031533|emb|CAY69456.1| 5' to 3' DNA helicase, involved in nucleotide excision repair and
transcription [Komagataella pastoris GS115]
gi|328351762|emb|CCA38161.1| DNA excision repair protein ERCC-2 [Komagataella pastoris CBS 7435]
Length = 773
Score = 129 bits (325), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 180/830 (21%), Positives = 326/830 (39%), Gaps = 221/830 (26%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+ + + V FPY + Y Q +MC + TLD G+C +LE P+GTGK++SLL T+
Sbjct: 3 FLIDDLPVIFPYPKIYPEQYAYMCDIKRTLDIG---GNC--ILEMPSGTGKTISLLSLTV 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNK 136
++Q F PE +
Sbjct: 58 SYQM------------------------------FYPEHR-------------------- 67
Query: 137 NVKKKMTPTIFYASRTHSQISQVISEYKKTA-YRVP-MAV--------LASRKHYCTNKY 186
I Y SRT S+I + + E K +R + V L SRK+ C +
Sbjct: 68 --------KIIYCSRTMSEIEKALIELTKLMDFRTKELGVKENFRGLGLTSRKNLCLHPI 119
Query: 187 VRDKENI--DEECKLLL------------GDRNLGCPQFKNVHKVRGHPSLQKGGCHEVH 232
++++ I DE+C+ + D++ C + ++ + H + G V+
Sbjct: 120 SQERKGIVVDEKCRRMTNGQLSLQVAKGEADKDQLCSFHEKMNDLDSHEYIPIG----VY 175
Query: 233 DIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDE 291
E+L+ + V C Y+ R M ++ Y Y+++P I + ++ K +I+I DE
Sbjct: 176 SFEELIKYCKGVGICPYFTVRRMMSFCNIIIYSYHYLLDPKIAQRVSKELSKESIVIFDE 235
Query: 292 AHNIEDIARDAGSVDIDEDVLLK----------------------LQMELEQVCS----- 324
AHNI+++ ++ S+D+ D L K LQ E E++
Sbjct: 236 AHNIDNVCIESLSLDLTNDTLKKASRGVNSLSKKVDEIKRIDSKKLQDEYERLVEGLRAT 295
Query: 325 ----------VNPMIYQPLIEMTQDLVGWIERRK--ATLAKREFQHFFSCWTGDKALREL 372
NP++ P +T+ + G I R + KR ++ T K L +
Sbjct: 296 ESSRNEELIMANPIL--PDDILTESIPGNIRRGEHFVMFLKRFIEYL---KTRMKVLHVI 350
Query: 373 QEANIS-RQCFPILLECATKAIKEATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSH 431
E S Q +L K ++ + + L ++ I + F + ++
Sbjct: 351 SETPASFLQHLKLLTFIERKPLRFCAERLALLVKTLELTEIEEFIALKDIATFATLVSTY 410
Query: 432 VSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNS 491
+ +QL L+ Y ++ P L CL+ ++ K + + S+I+TSGT+SP++
Sbjct: 411 ETGFQLILEPYETENASGPNP----ILHFTCLDASIAIKPIFDRFSSVIITSGTISPLDM 466
Query: 492 FSSELGVQFGTCLEAPHVIDVDLQ-VLTSVISTGPDNYPLNASYK--------------- 535
+ L +F T ++ + + + + L +++ G D +++ ++
Sbjct: 467 YPKML--KFDTVIQESYTMTLSRRSFLPLIVTKGSDQVSISSRFEIRNDPSVVRNYGTLL 524
Query: 536 ------TADG-------YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLK 582
T DG Y ME + + W+ G + K + VE SQE + L+
Sbjct: 525 IEFSKITPDGLVVFFPSYLYMESIISMWQNMGILDEVWKYKLILVETP-DSQET-SLGLE 582
Query: 583 HYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPN 642
Y + S G +GA L+V RGK+ GI F +
Sbjct: 583 TYRKACSNG------------------------------RGAVLLSVARGKVSEGIDFDH 612
Query: 643 ---INDIQVSLKKKYNDT--------YRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRF 691
+ + + +Y ++ Y + + NE+ A R Q +GR +R +
Sbjct: 613 HFGRTVLMIGIPFQYTESRILKARLEYLRDHHQIKENEFLSFDAMRHAAQCLGRVLRGKD 672
Query: 692 DYGAIILLDERFQEERNRAHISKWLRKSIKQYD---SFDASLEGLKSFFR 738
DYG ++L D RF +RN+ + KW+ +++ D S D ++ K F R
Sbjct: 673 DYGIMVLADRRFSRKRNQ--LPKWIAQNLLDADTNLSTDMAIANAKKFLR 720
>gi|313224365|emb|CBY20154.1| unnamed protein product [Oikopleura dioica]
Length = 976
Score = 129 bits (325), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 100/335 (29%), Positives = 153/335 (45%), Gaps = 80/335 (23%)
Query: 13 KPLNAYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLL 72
K LN Y G+ V FPY PY +Q ++ + + L +R+ HA+LESPTGTGK+L LL
Sbjct: 5 KTLNFY---GVDVRFPYDPYPAQEEYIKKCVEAL--VKRN---HAVLESPTGTGKTLCLL 56
Query: 73 CSTLAWQQNCKLKNQLANISHSKPDTEAVTDPLAN--GGGFIPESQPSTIPPSTNGQTAQ 130
S +A+++ K +P N GG ES
Sbjct: 57 ASVIAYREWAK------------------RNPPKNKYGGSLGTES--------------- 83
Query: 131 VAMNNKNVKKKMTPTIFYASRTHSQISQVISEYKKT----AYRVPMAVLASRKHYCTNKY 186
P I YASRTHSQ++QV+SE +K Y V M V+ R C +
Sbjct: 84 ------------IPKIIYASRTHSQLTQVVSELRKLRDVCGYNVDMTVVGGRSSLCVDLT 131
Query: 187 VRDKENIDEE---CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLV----N 239
V+ N E+ C LL + + + + + G H++ DIE+LV N
Sbjct: 132 VKKITNNSEQQNACHLLKAAQ-------EEAKRKQNQELISSSGVHDIMDIEELVSWCEN 184
Query: 240 VGQVVRGCS-----YYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHN 294
+ CS YY +RS AD +++ PY+YI++ IR + K ILILDEAHN
Sbjct: 185 PPPQIPDCSTAICGYYLSRSKADTVEILLMPYNYILDKKIRQRNSFEFKNKILILDEAHN 244
Query: 295 IEDIARDAGS--VDIDEDVLLKLQMELEQVCSVNP 327
+E + ++ S + + + ++ ++ + + NP
Sbjct: 245 VEQVCEESSSHYISLKKLEIISKELAMSKASVTNP 279
Score = 114 bits (284), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 131/287 (45%), Gaps = 60/287 (20%)
Query: 458 LSLWCLNPAVVFKDV---AELSLSIILTSGTLSPMNSFSSELGVQFGTCLEA-----PHV 509
+ +WC N + D+ AE ++ILTSGTLSP++ + + LG+ T L+ HV
Sbjct: 416 IKIWCFNASYSIDDITQGAEGVYNLILTSGTLSPLDEYINSLGLDRPTQLKTIQLMNDHV 475
Query: 510 IDVDLQVLTSVISTGPDNYPLNASYKTADGYKLMEKLCNRWRETGQWSRLNAKKPLFVEP 569
ID +T++ TG + ++ + EK R+ + V P
Sbjct: 476 IDSKQLFVTTL--TGTKGAEFHNVFRNRQDKNMFEKYAEVMRDMKE-----------VSP 522
Query: 570 KGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRV----------------KREGNNDLNTI 613
G +V Y ++ K + KK K+E N +
Sbjct: 523 GGM------LVFHPTYALMAISKKFWGLHKKSATFKNSFNVPVFLEPSNKKELENMTESF 576
Query: 614 ESQ-ENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKKYNDT 657
E + N + GA F VCRGK ++ GIP+P D +V LKK+Y D
Sbjct: 577 ERELVNDEETGAIFNGVCRGKMSEGVDFADCRGRVVVITGIPYPPAKDPKVMLKKEYLDN 636
Query: 658 YR-SSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERF 703
+ + K ++ GN+WY +A RA+NQA+GR IRH+ D+GAII +D+RF
Sbjct: 637 RKKTGKGIIDGNKWYGIEAIRAINQAVGRIIRHKNDFGAIIYMDKRF 683
>gi|261200873|ref|XP_002626837.1| DNA repair helicase RAD3 [Ajellomyces dermatitidis SLH14081]
gi|239593909|gb|EEQ76490.1| DNA repair helicase RAD3 [Ajellomyces dermatitidis SLH14081]
Length = 773
Score = 129 bits (324), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 181/774 (23%), Positives = 323/774 (41%), Gaps = 153/774 (19%)
Query: 39 MCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCKLKNQLANISHSKPDT 98
MC + TLD GHC +LE P+GTGK++SLL +A+QQ+ + +L S + +
Sbjct: 1 MCDLKKTLDAG---GHC--VLEMPSGTGKTVSLLSLIIAYQQHRPEQRKLIYCSRTMSEI 55
Query: 99 EAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKKMTPTIFYASRTHSQISQ 158
E L + +T Q+ +T SR + +
Sbjct: 56 EKALAELKALMKY---------------RTRQLGYAEDFRGLGLT------SRKNLCLHP 94
Query: 159 VISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEECKLLLGDRNLGCPQFKNVHKVR 218
+ K AV+ +R T +V++K+ E+ +L + NL + N+
Sbjct: 95 SVKREKSG------AVVDARCRSLTAGFVKEKKERGEDVELCIYHENLDLLEPSNL---- 144
Query: 219 GHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAM 278
+ G V ++D++ G+ + C Y++ R M ++ Y Y+++P I +
Sbjct: 145 ----VPPG----VFTLDDIIKYGEQHKQCPYFSIRRMMPFCNVIIYSYHYLLDPKIAERV 196
Query: 279 EVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLK-------LQMELEQVCSVNPMIY 330
++ K +I++ DEAHNI+++ ++ S+D+ ED L K L+ ++E++ S +
Sbjct: 197 SQELSKDSIVVFDEAHNIDNVCIESLSIDLTEDSLRKASRGATNLERKIEEMKSSDA--- 253
Query: 331 QPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRELQEANISR-QCFPILLECA 389
+ L Q LV + R A A++E Q + D L+E NI R + F L+
Sbjct: 254 EKLQNEYQKLVEGL--RGADEARQEEQLMANPALPDDLLKEAVPGNIRRAEHFVAFLKRF 311
Query: 390 TKAIK---EATDTESELP-----HLSGMSVI-----------------TLEGL------- 417
+ +K + T T SE P HL ++ I TLE +
Sbjct: 312 IEYLKTRMKITHTISETPLSFLAHLKDLTFIERKPLRFCAERLASLVRTLELMNLEDYQP 371
Query: 418 FSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSL 477
+ F + ++ + L L+ + + P L CL+ A+ K V +
Sbjct: 372 LQQVAAFATLAATYEKGFLLILEPFESETATVPNP----ILHFTCLDAAIAIKPVFDRFS 427
Query: 478 SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQ-VLTSVISTGPDNYPLNASYK- 535
S+I+TSGTLSP+ + L +F T L+ + + + + L V++ G D +++S++
Sbjct: 428 SVIVTSGTLSPLEMYPKML--KFTTVLQESYTMTLARRSFLPMVVTRGSDQAQISSSFQI 485
Query: 536 --------------------TADG-------YKLMEKLCNRWRETGQWSRLNAKKPLFVE 568
T DG Y ME + + W+ G + K + VE
Sbjct: 486 RNDPGVVRNYGNLLLEFSRITPDGIVVFFPSYLYMESIISMWQGMGILDLVWNYKLILVE 545
Query: 569 PKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLA 628
SQE + L+ Y + G ++ R K D + + G
Sbjct: 546 TP-DSQES-SLALETYRTACCNGRGAVLLCVARGKVSEGIDFD--------HHYG----- 590
Query: 629 VCRGKIVVGIPFPNINDIQVSLKKKY-NDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCI 687
R I +G+PF + + ++ + YR + N++ A R Q +GR I
Sbjct: 591 --RAVICIGVPFQYTESRILKARLEFLRENYR-----IRENDFLSFDAMRHAAQCLGRVI 643
Query: 688 RHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYD---SFDASLEGLKSFFR 738
R + DYG ++L D RFQ + R+ + KW+ +++ + + S D ++ KSF R
Sbjct: 644 RGKDDYGVMVLADRRFQ--KRRSQLPKWISQAMLESETNLSTDMAVATAKSFLR 695
>gi|339246019|ref|XP_003374643.1| DNA repair helicase family protein [Trichinella spiralis]
gi|316972128|gb|EFV55819.1| DNA repair helicase family protein [Trichinella spiralis]
Length = 987
Score = 129 bits (323), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/306 (30%), Positives = 147/306 (48%), Gaps = 43/306 (14%)
Query: 447 SKNPGGNWTHTLSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGV------- 498
SK PG + +++ WC + + + + L S+I+TSGTLSP++SF +E+ +
Sbjct: 451 SKIPG---SFSINYWCFSAGIGMSLLLKCQLRSVIVTSGTLSPLDSFVNEMRMCAASVLP 507
Query: 499 -----QFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTADGYKLMEKLCNRWRET 553
F LE H++ + Q L + +GPD L+A + + K + L N +
Sbjct: 508 VYFERPFPIRLENCHIVKSE-QYLFCICPSGPDGERLHADFSNRNNKKYLNSLGNSINNS 566
Query: 554 GQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTI 613
R+ K +F+EPK ++ +F+ V+ Y KR+ +L +
Sbjct: 567 IM-DRVKRFKKVFIEPK--TKCEFQTVMDEY---------------KRLAEASGTELGVL 608
Query: 614 ESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYNDTYRSSKNL-LSGNEWYC 672
+ + A R ++ GIPFP D V LK+ Y + + K L L G+ WY
Sbjct: 609 SEGYDFSDCSA------RAVVIAGIPFPPAFDPHVRLKRDYLNEQKQKKLLSLDGSAWYV 662
Query: 673 NQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEG 732
A R +NQAIGR IRHR D+GAIIL D RF N + WLR+S Y +F ++
Sbjct: 663 LDAVRVVNQAIGRVIRHRNDFGAIILADNRFSSWPNY-YYPNWLRQSAMAYKNFGDVVKA 721
Query: 733 LKSFFR 738
L +FF+
Sbjct: 722 LANFFK 727
Score = 119 bits (297), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 131/271 (48%), Gaps = 57/271 (21%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHC-------------HALLESPTGTG 66
+ GI V FPY+PY QL +M +VI+ L++ + C +A LESPTGTG
Sbjct: 5 ICGILVNFPYEPYPCQLDYMEKVITCLNQLTEENFCFAYCLLHLNIQRSNAALESPTGTG 64
Query: 67 KSLSLLCSTLAWQQNCKLKNQLA-NISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTN 125
K+L LLC+ L W + K + N+S SK
Sbjct: 65 KTLCLLCACLGWLETVHPKENITPNMSMSK------------------------------ 94
Query: 126 GQTAQVAMNNKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYR-VPMAVLASRKHYCTN 184
++ N K ++ P I YASRTHSQ+SQVI E KT Y + + +L SR C +
Sbjct: 95 ----NLSKNEKQLQPA-RPQILYASRTHSQLSQVIKELNKTTYAGIRVCILGSRDQLCID 149
Query: 185 KYVR-DKENI--DEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVG 241
+ V+ +K++I + C+ R C + + + G ++V DIEDL++ G
Sbjct: 150 EEVKAEKQSIIKNHICRAKRLSR--SCRYYNELKNATATSFI--FGDNKVMDIEDLLSSG 205
Query: 242 QVVRGCSYYAARSMADDAQLVFCPYSYIINP 272
++ C +Y AR ++A L+ PY+Y+++P
Sbjct: 206 KLNNFCPFYKAREGVEEADLILMPYNYVLDP 236
>gi|145525952|ref|XP_001448787.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124416353|emb|CAK81390.1| unnamed protein product [Paramecium tetraurelia]
Length = 901
Score = 129 bits (323), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 118/439 (26%), Positives = 191/439 (43%), Gaps = 87/439 (19%)
Query: 457 TLSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVD-- 513
++ +WCL P++ F + S+ SI+LTSGTLSPM S+S EL + F L H+ID+D
Sbjct: 474 SIHMWCLEPSLAFSRLYNKSIHSILLTSGTLSPMPSWSCELRIPFDVQLANEHIIDLDKN 533
Query: 514 LQVLTSVISTGPDNYPLNASYKTADG--------------------YKLMEKLCNRWRET 553
L++ N N Y G Y LM K ++W +
Sbjct: 534 LRIFQHKTYDFSYNQRDNEEYICGFGVTLLSLCQTIPNGILVIFSSYSLMFKFRSKWTQN 593
Query: 554 GQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTI 613
RL+ K EP+ +Q + V Y +G+ V + +V
Sbjct: 594 KLIPRLSELKVCLWEPQQSNQ--MQNVFDTYKEKSKKGAIMFAVHRGKV----------- 640
Query: 614 ESQENANKKGASFL-AVCRGKIVVGIPFPNINDIQV-----SLKKKYNDTYRSSKNLLSG 667
+G F +CR +VG+P+P D + L + YND + + +
Sbjct: 641 -------AEGIDFSDELCRAIFLVGVPYPPKKDNHLLEKMNYLDRIYNDLEFNHQQRIKS 693
Query: 668 NEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFD 727
+EWY QA RA NQA+GR IRH DYG + L D+RF+++ R +SKW + +I+ + + D
Sbjct: 694 SEWYTQQAIRATNQAMGRVIRHINDYGIVYLCDKRFEQKEIRQGLSKWAQPAIQPWINDD 753
Query: 728 ASLEGLKSFF-------------------RDVKGWVGKKMFNGLENSDNDVDHVSSMDQC 768
++ K FF ++VK K F GL+N + ++
Sbjct: 754 DVIKQTKEFFNRTASNKEQERIEKKPFLEQEVKK--RKLQFFGLQNK-------TEFEKL 804
Query: 769 KEVTKQNTQELNKSDHSGQNV-QSISKYDPFSHQKSQGN---------FEVQTSLQTDQN 818
KE T + + L + +++ Q + +P KSQ N F Q S ++ +
Sbjct: 805 KEDTYERMRSLGEQQKQEESINQQNDQINPQPQTKSQSNSNSKIQSEFFSCQNSNFSNLD 864
Query: 819 NSCIEYIDLERMNDKNNHS 837
+S I+ +L++ D +N S
Sbjct: 865 HSHIQQTELKKNIDDDNQS 883
Score = 120 bits (301), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 137/299 (45%), Gaps = 64/299 (21%)
Query: 25 VEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCKL 84
V FP+QPY Q +M VI L+ Q +ALLESPTGTGK+LSLLC++LAW
Sbjct: 57 VYFPHQPYEVQKAYMESVIQALNMKQ-----NALLESPTGTGKTLSLLCASLAW------ 105
Query: 85 KNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKKMTP 144
+ ++ D ++ P KN+K
Sbjct: 106 ------LKKNRQDQQSSDQP-------------------------------KNIK----- 123
Query: 145 TIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKEN--IDEECKLLLG 202
I Y+SRTH+Q+ QV E KKT Y+ +++L SR YC + +++ C+ +
Sbjct: 124 -IIYSSRTHAQLKQVAMELKKTIYKPNVSMLGSRDQYCIRGEFSMLKGTLLNQSCRKSVK 182
Query: 203 DRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLV 262
C +K H + + + V +E+ G + C YY R D A L+
Sbjct: 183 ANQ--CQFYKKEHLI----VMAQSYSTLVSSLEEARQFGLKNKLCPYYFERQRLDSADLI 236
Query: 263 FCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQ 321
PY+Y++ + V I+ +ILI DEAHN++ A D S I + +++ + +LE+
Sbjct: 237 LLPYNYLLEKDFQDV--VQIENSILIFDEAHNVQSTAEDGSSFFITLNNIVEAEKDLEK 293
>gi|157168345|ref|NP_001096787.1| TFIIH basal transcription factor complex helicase XPD subunit [Bos
taurus]
gi|182645388|sp|A6QLJ0.1|ERCC2_BOVIN RecName: Full=TFIIH basal transcription factor complex helicase XPD
subunit; AltName: Full=CXPD; AltName: Full=DNA excision
repair protein ERCC-2; AltName: Full=DNA repair protein
complementing XP-D cells; AltName: Full=Xeroderma
pigmentosum group D-complementing protein
gi|151556394|gb|AAI47983.1| ERCC2 protein [Bos taurus]
gi|296477395|tpg|DAA19510.1| TPA: TFIIH basal transcription factor complex helicase subunit [Bos
taurus]
Length = 760
Score = 129 bits (323), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 190/803 (23%), Positives = 312/803 (38%), Gaps = 165/803 (20%)
Query: 20 VGGIQVEFPYQ-PYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
V G+ V FPY Y Q +M + TLD H +LE P+GTGK++SLL +A+
Sbjct: 5 VDGLLVYFPYDYIYPEQFSYMLELKRTLD-----AKGHGVLEMPSGTGKTVSLLALIMAY 59
Query: 79 QQNCKLK-NQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKN 137
Q+ L+ +L S + P+ E V + L F + + +P +++ N
Sbjct: 60 QRAYPLEVTKLIYCSRTVPEIEKVIEELRKLLSFYEKQEGEKLPFLGLALSSR---KNLC 116
Query: 138 VKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEEC 197
+ ++TP F + + H T YVR +
Sbjct: 117 IHPEVTPLRFGKD------------------------VDGKCHSLTASYVRAQYQ----- 147
Query: 198 KLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMAD 257
D +L +F V G G +++++DL VG+ C Y+ AR
Sbjct: 148 ----RDSSLPHCRFYEEFDVHGRQVPLPTG---IYNLDDLKAVGRRQGWCPYFLARYSIL 200
Query: 258 DAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQ 316
A +V Y Y+++P I + ++ + A+++ DEAHNI+++ D+ SV++ L + Q
Sbjct: 201 HANVVVYSYHYLLDPKIADLVSKELARKAVVVFDEAHNIDNVCIDSMSVNLTRRTLDRCQ 260
Query: 317 MELE----QVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALREL 372
LE V + Q L E + LV + R+A+ A+ H + D+ L+E
Sbjct: 261 ANLETLQKTVLRIKETDEQRLREEYRRLVEGL--REASAARETDAHLANPVLPDEVLKEA 318
Query: 373 QEANI-SRQCFPILLECATKAIK-----EATDTESELPHLSGMS---------------- 410
+I + + F L + +K + ES LSG++
Sbjct: 319 VPGSIRTAEHFLGFLRRLLEYVKWRLRVQHVVQESPPAFLSGLAQRVCIQRKPLRFCAER 378
Query: 411 ----VITLE----GLFSSLTYFFSRNGSHVSDYQLALQKYIK-RDSKNPGGNWTHTLSLW 461
+ TLE FS LT + + VS Y I+ D + P L
Sbjct: 379 LRSLLYTLEISDLTDFSPLT-LLANFATLVSTYAKGFTIIIEPFDDRTPTIA-NPILHFS 436
Query: 462 CLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELG---VQFGT--------CLEAPHVI 510
C++ ++ K V E S+I+TSGTLSP++ + L V T CL P +I
Sbjct: 437 CMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMATFTMTLARVCL-CPMII 495
Query: 511 DV--DLQVLTSVISTGPD--------NYPLNASYKTADG-------YKLMEKLCNRWRET 553
D ++S T D N L S DG Y+ ME W E
Sbjct: 496 GRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFTSYQYMESTVASWYEQ 555
Query: 554 GQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTI 613
G + K LF+E + G++ + L+ Y + G
Sbjct: 556 GILENIQRNKLLFIETQDGAETS--VALEKYQEACENG---------------------- 591
Query: 614 ESQENANKKGASFLAVCRGKIVVGIPF-------------PNINDIQVSLKKKYNDTYRS 660
+GA L+V RGK+ GI F P + LK + Y
Sbjct: 592 --------RGAILLSVARGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLE--YLR 641
Query: 661 SKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSI 720
+ + N++ A R Q +GR IR + DYG ++ D+RF R + +W+++ +
Sbjct: 642 DQFQIRENDFLTFDAMRHAAQCVGRAIRGKTDYGLMVFADKRFARADKRGKLPRWIQEHL 701
Query: 721 KQYD---SFDASLEGLKSFFRDV 740
+ + D ++ K F R +
Sbjct: 702 TDANLNLTVDEGVQVAKYFLRQM 724
>gi|408395822|gb|EKJ74995.1| hypothetical protein FPSE_04815 [Fusarium pseudograminearum CS3096]
Length = 789
Score = 129 bits (323), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 187/821 (22%), Positives = 324/821 (39%), Gaps = 204/821 (24%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+++ + V FPY + Y Q +MC + TLD GHC +LE P+GTGK++SLL +
Sbjct: 3 FNIDDLPVLFPYPRIYPEQYAYMCDLKKTLDAG---GHC--VLEMPSGTGKTVSLLSLIV 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNK 136
A+QQ ++PE
Sbjct: 58 AYQQ------------------------------YMPE---------------------- 65
Query: 137 NVKKKMTPTIFYASRTHSQISQVISEYKK-TAYRVPMAV---------LASRKHYCTNKY 186
K+K+ Y SRT S+I + + E K YR L SRK+ C +
Sbjct: 66 --KRKL----IYCSRTMSEIEKALVELKSLMKYRAEELGYEEEFRGLGLTSRKNLCLHPS 119
Query: 187 VRDKEN---IDEECKLLL----------GDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHD 233
V+ +++ +D C+ L G+ C N+ + H + G V
Sbjct: 120 VKREKSGAIVDARCRSLTAGFVKEKKERGENVDVCVYHDNLDLLEPHNLIPNG----VWS 175
Query: 234 IEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEA 292
+D++ G+ + C Y+ AR M +V Y Y+++P I + D K I++ DEA
Sbjct: 176 FDDIIRYGEEQKQCPYFTARRMMQYCNVVIFSYHYLLDPKIAERVSKDFSKDCIVVFDEA 235
Query: 293 HNIEDIARDAGSVDIDEDVLLK-------LQMELEQVCSVNPMIYQPLIEMTQDLVGWIE 345
HNI+++ ++ S DI ED L K L+ ++ Q+ + + L Q LV +
Sbjct: 236 HNIDNVCIESLSTDITEDSLRKATRGAQNLENKISQMRDTDQ---EQLQNEYQKLVQGL- 291
Query: 346 RRKATLAKREFQHFFSCWTGDKALRELQEANISR--------QCFPILLECATKAIKEAT 397
R A A++E + + L+E NI R + F L+ K + +
Sbjct: 292 -RDADEARQEDAFMANPALPEDLLKEAVPGNIRRAEHFIAFLKRFIEYLKTRMKVRQVIS 350
Query: 398 DTE-SELPHLSGMSVITLEGL------FSSLTYFFSRNGSHVSDYQ-------------- 436
+T S L HL + I + L +SL + +++ DYQ
Sbjct: 351 ETPPSFLSHLREHTFIEKKPLRFCAERLTSLVR--TLELTNIEDYQPLQEVATFATLVAT 408
Query: 437 ------LALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMN 490
L L+ + ++ P L CL+ A+ K V + S+I+TSGT+SP+
Sbjct: 409 YEKGFLLILEPFESDTAEVPNP----VLHFTCLDAAIAIKPVFDRFYSVIITSGTISPLE 464
Query: 491 SFSSELGVQFGTCLEAPHVIDVDLQVLTSVIST-GPDNYPLNASYK-------------- 535
+ L F T ++ + + + + +I T G D ++ S++
Sbjct: 465 IYPKML--DFQTVIQESYAMTLARRSFMPMIVTRGSDQASVSTSFQVRNEPSVVRNYGNL 522
Query: 536 -------TADG-------YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVL 581
T DG Y ME + + W+ G + K + VE + + L
Sbjct: 523 LTEFAKITPDGMVVFFPSYLYMESIISMWQGMGVLDEVWKYKLILVETPDAQETS--LAL 580
Query: 582 KHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFP 641
+ Y + G ++ R K D + ++ G R + +G+PF
Sbjct: 581 ETYRTACCNGRGAVLLCVARGKVSEGIDFD--------HQYG-------RTVLCIGVPFQ 625
Query: 642 NINDIQVSLKKKY-NDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLD 700
+ + ++ +TYR + N++ A R Q +GR +R + DYG ++L D
Sbjct: 626 YTESRILKARLQFLRETYR-----IKENDFLSFDAMRHAAQCLGRVLRGKDDYGIMVLAD 680
Query: 701 ERFQEERNRAHISKWLRKSIKQYD---SFDASLEGLKSFFR 738
RFQ + R + KW+ + +++ D S D ++ + F R
Sbjct: 681 RRFQ--KKRTQLPKWINQGLQESDVNLSTDMAVSSARRFLR 719
>gi|259485564|tpe|CBF82692.1| TPA: DNA helicase, putative (AFU_orthologue; AFUA_3G05590)
[Aspergillus nidulans FGSC A4]
Length = 841
Score = 128 bits (322), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 203/875 (23%), Positives = 333/875 (38%), Gaps = 223/875 (25%)
Query: 28 PYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLL--------------- 72
PY PY Q+ FM + L+ + A+ ESPTG+G L ++
Sbjct: 20 PYTPYDIQVRFMQSLYECLEEGKV-----AIFESPTGSGPRLQIIELSCTDWTRNRDDDE 74
Query: 73 -----------CSTLAWQQNCKLKNQLANISHSKPDTEAVT------------------- 102
S ++ + +++LA I + A
Sbjct: 75 PEWMVEFAKREASRAVTEKRIEFESRLARIKREEEQQRAALESSEGSRKRQRVSVVSRDQ 134
Query: 103 -----DPLANGGGFIPESQPSTIPPST------NGQTAQVAMNNKNVKKKMTP------- 144
D A +PS+IP + + T ++ + K+ P
Sbjct: 135 DTEDDDQFALDDYDSENDEPSSIPRGSATATGLSSSTLELLERLRKYGSKIKPEEDDEND 194
Query: 145 -TIFYASRTHSQISQVISEYKKTAY--------------------RVPMAVLASRKHYCT 183
IFY SRTHSQ+ Q SE ++ R+ L SRK+ C
Sbjct: 195 IKIFYCSRTHSQLMQFASELRRVTMPSTLPESLRQGLTDEEEQGERIKHISLGSRKNLCI 254
Query: 184 NKYVRDKEN---IDEECKLLLGDRN----LGCPQFKNVHKVRGHPSLQKGGCHEVHDIED 236
N V N I+E C L L N L C S + V DIED
Sbjct: 255 NSRVAALGNPTAINERC-LELQQPNTPAPLRCSYLPTEEDEAKTLSFRDHALATVKDIED 313
Query: 237 LVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIE 296
L +G+ + C YYA+R + ++ R A+ + IKG ++I+DEAHN+
Sbjct: 314 LGKLGKKLGLCPYYASRGVVSHSERS-----------ARDALNLSIKGHVVIIDEAHNLM 362
Query: 297 DIARDAGSVDIDEDVLLKLQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREF 356
D + SV + L +L+ + Q+ + L ++ + + R +++A
Sbjct: 363 DAISNIHSVTV---TLSQLRTSIFQLTTYARKFKTRLKGKNRNYIAQVIRLISSIAD-HL 418
Query: 357 QHFF--------SCWTGD-------------KALRELQEANISRQCFPILLECATKAIKE 395
Q S + D K R L E+ ++R+ + +KA +
Sbjct: 419 QSLIDNKQASEGSVLSSDLMAGKGADQINPYKLCRYLNESKLARKVDGYIDFSQSKANAQ 478
Query: 396 ATDTESELPHLSGMS--VITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGN 453
A + +S +P L + ++ L L S FF+ K PG
Sbjct: 479 A-EPKSTIPVLFHIQSFLLPLMNLSSEGRLFFT---------------------KTPGDI 516
Query: 454 WTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFG----TCLEAPHV 509
H + L+P F+++ E + ++IL GT+SPM+ + + L HV
Sbjct: 517 QLHYM---LLDPTNHFREIVEDARAVILAGGTMSPMSDYLNHLFSYVPKDRLNTFSYGHV 573
Query: 510 IDVDLQVLTSVISTGPDNYPLNASYKTADGYKLMEKLCNRWRETGQWSRLNAKKPLFVEP 569
I + + ++ G + +Y D K++ L +++L P +
Sbjct: 574 IPSE-NLTAHTLARGVTGCEFDFTYAGRDAEKMILDLGR------TFTQLCRAIPDGIVA 626
Query: 570 KGGSQEDFEIVLKHYYNSISQGSKCA----VVRKKRVKREG-----------NNDLNTIE 614
S E VL + N++ + +K V ++K++ E NN NTI
Sbjct: 627 FFPSYEYLSRVLNIWKNAVVRENKQTLYETVEKEKQILYESRETELTTDDLLNNYANTI- 685
Query: 615 SQENANK-KGASFLAVC---------------RGKIVVGIPFPNINDIQVSLKKKY--ND 656
NK +GA L+V RG ++VG+PFPNI K KY
Sbjct: 686 -----NKGRGALLLSVVGGKLSEGINFSDKLGRGVLIVGLPFPNIRSPVWQAKIKYIEQK 740
Query: 657 TYRS-------SKNL---LSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEE 706
YR+ S+ L +G ++Y N RA+NQ IGR IRHR DY AI+L+D+R+ +
Sbjct: 741 AYRNVGSGSEESRRLSAKAAGRDFYENACMRAVNQCIGRAIRHRNDYAAIVLIDKRYGKT 800
Query: 707 RNRAHISKWLRKSIKQYDSF---DASLEGLKSFFR 738
A + W+++S+ + + +L+GL FFR
Sbjct: 801 SIEAKLPGWIKQSLVKDSALLPAATTLDGLACFFR 835
>gi|356544551|ref|XP_003540713.1| PREDICTED: regulator of telomere elongation helicase 1 homolog
[Glycine max]
Length = 116
Score = 128 bits (322), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/177 (44%), Positives = 89/177 (50%), Gaps = 62/177 (35%)
Query: 1 MVSEANPNPNYRKPLNAYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLE 60
M+ +NPNP Y +GG+QVEFPYQPYGSQ FM RVISTL+ AQ++GHCH LLE
Sbjct: 1 MIFASNPNPK-----KVYLIGGLQVEFPYQPYGSQFAFMARVISTLNLAQKEGHCHTLLE 55
Query: 61 SPTGTGKSLSLLCSTLAWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTI 120
S P S I
Sbjct: 56 S---------------------------------------------------PSGTVSEI 64
Query: 121 PPSTNGQTAQVAMNNKNVKKKMTPTIFYASR-THSQISQVISEYKKTAYRVPMAVLA 176
P T Q +NNK KKK PTI+YASR THSQISQV+ E +KTAYRVPMAVLA
Sbjct: 65 PDHT-----QFEINNKKQKKKEAPTIYYASRRTHSQISQVVRELRKTAYRVPMAVLA 116
>gi|344269323|ref|XP_003406502.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit [Loxodonta africana]
Length = 845
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 187/796 (23%), Positives = 316/796 (39%), Gaps = 148/796 (18%)
Query: 20 VGGIQVEFPYQ-PYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
V G+ V FPY Y Q +M + TLD H +LE P+GTGK++SLL +A+
Sbjct: 87 VDGLLVYFPYDYIYPEQFSYMLELKRTLD-----AKGHGVLEMPSGTGKTVSLLALIMAY 141
Query: 79 QQNCKLK-NQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKN 137
Q+ L+ +L S + P+ E V + L F + + +P +++ N
Sbjct: 142 QRAYPLEVTKLIYCSRTVPEIEKVIEELRKLLNFYEKQEGEKLPFLGLALSSR---KNLC 198
Query: 138 VKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEEC 197
+ ++TP F + + H T YVR + D
Sbjct: 199 IHPEVTPLRFGKD------------------------VDGKCHSLTASYVRAQYQQDSSL 234
Query: 198 KLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMAD 257
C ++ L G +++++DL +G+ C Y+ AR
Sbjct: 235 P--------HCSFYEEFDTHGRQVPLSAG----IYNLDDLKALGRRQGWCPYFLARYSIL 282
Query: 258 DAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQ 316
A +V Y Y+++P I + ++ + A+++ DEAHNI+++ D+ SV+I L + Q
Sbjct: 283 HANVVVYSYHYLLDPKIADLVSKELARKAVVVFDEAHNIDNVCIDSMSVNITRRTLDRCQ 342
Query: 317 MELE----QVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALREL 372
LE V + Q L E + LV + R+A+ A+ H + D+ L+E
Sbjct: 343 GNLETLQKTVLRIKETDEQRLREEYRRLVEGL--REASAARETDAHLANPVLPDEVLQEA 400
Query: 373 QEANI-SRQCFPILLECATKAIK-----EATDTESELPHLSGMS---------------- 410
+I + + F L + +K + ES LSG++
Sbjct: 401 VPGSIRTAEHFLGFLRRLLEYVKWRLRVQHVVQESPPAFLSGLAQRVCIQRKPLRFCAER 460
Query: 411 ----VITLE----GLFSSLTY---FFSRNGSHVSDYQLALQKYIKRDS--KNPGGNWTHT 457
+ TLE FS LT F + ++ + + ++ + R NP
Sbjct: 461 LRSLLHTLEIADLADFSPLTLLANFATLVSTYAKGFTIIIEPFDDRTPTIANP------I 514
Query: 458 LSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELG---VQFGT--------CLEA 506
L C++ ++ K V E S+I+TSGTLSP++ + L V T CL
Sbjct: 515 LHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMATFTMTLARVCL-C 573
Query: 507 PHVIDV--DLQVLTSVISTGPD--------NYPLNASYKTADG-------YKLMEKLCNR 549
P +I D ++S T D N L S DG Y+ ME
Sbjct: 574 PMIIGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFTSYQYMESTVAS 633
Query: 550 WRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKR-EGNN 608
W E G + K LF+E + G++ + L+ Y +G V R K EGN
Sbjct: 634 WYEQGILENIQRNKLLFIETQDGAETS--VALEKYQEGWEKGRGGIPVSSARGKMSEGN- 690
Query: 609 DLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKY-NDTYRSSKNLLSG 667
E E + G R I+ G+P+ + + +Y D ++ +
Sbjct: 691 -----EFWEGVHHYG-------RAVIMFGVPYVYTQSRILKARLEYLRDQFQ-----IRE 733
Query: 668 NEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYD--- 724
N++ A R Q +GR IR + DYG ++ D+RF R + +W+++ + +
Sbjct: 734 NDFLTFDAMRHAAQCVGRAIRGKTDYGLMVFADKRFARADKRGKLPRWIQEHLTDANLNL 793
Query: 725 SFDASLEGLKSFFRDV 740
+ D ++ K F R +
Sbjct: 794 TVDEGVQVAKYFLRQM 809
>gi|425770095|gb|EKV08569.1| TFIIH complex helicase Rad3, putative [Penicillium digitatum Pd1]
gi|425771642|gb|EKV10079.1| TFIIH complex helicase Rad3, putative [Penicillium digitatum PHI26]
Length = 794
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 179/800 (22%), Positives = 323/800 (40%), Gaps = 162/800 (20%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+ + + V FPY + Y Q +MC + TLD GHC +LE P+GTGK++SLL +
Sbjct: 3 FFIDDLPVLFPYPRIYPEQYAYMCDLKKTLDAG---GHC--VLEMPSGTGKTVSLLSLIV 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNK 136
A+QQ+ +L S + + E L + E + + G +
Sbjct: 58 AYQQHYPEHRKLIYCSRTMSEIEKALAELKA----LMEHRAKEL-----GHEEEFRALGL 108
Query: 137 NVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE 196
+K + H + + +K+ V+ +R T +V++K+ E+
Sbjct: 109 TSRKNLC--------LHPSVKR-----EKSG-----TVVDARCRSLTAGFVKEKKERGED 150
Query: 197 CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMA 256
+L C +N+ + H + G V ++ L G+ + C Y++AR M
Sbjct: 151 VEL--------CVYHENLDLLEPHNLVPPG----VFTLDGLARYGEEHKQCPYFSARRMM 198
Query: 257 DDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLK- 314
++ Y Y+++P I + ++ K I++ DEAHNI+++ ++ S+D+ ED L K
Sbjct: 199 PWCNIIIYSYHYLLDPKIAERVSRELSKDCIVVFDEAHNIDNVCIESLSIDLSEDSLRKA 258
Query: 315 ------LQMELEQVCSVNPMI----YQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWT 364
L+ +E++ S + Y L+E Q+ A A+ E Q +
Sbjct: 259 TRGANNLERRIEEMKSTDEEKLKNEYSKLVEGLQE---------AEKAREEDQFISNPVL 309
Query: 365 GDKALRELQEANISR-QCFPILLECATKAIK---EATDTESELP-----HLSGMSVI--- 412
D L+E NI R + F L+ + +K + T T SE P HL ++ I
Sbjct: 310 PDDLLKEAVPGNIRRAEHFVSFLKRFIEYLKTRMKVTHTISETPPSFLTHLKDLTYIERK 369
Query: 413 --------------TLEGL-------FSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPG 451
TLE + + F + ++ + L L+ + + P
Sbjct: 370 PLRFCAERLTSLVRTLELVNIEDYQPLQEVATFATLVATYDKGFVLILEPFESEAATVPN 429
Query: 452 GNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVID 511
L CL+ A+ K V + S+I+TSGTLSP+ + LG F L+ + +
Sbjct: 430 P----ILHFTCLDAAIAIKPVFDRFSSVIITSGTLSPLEMYPKMLG--FTAVLQESYSMT 483
Query: 512 VDLQ-VLTSVISTGPDNYPLNASYK---------------------TADG-------YKL 542
+ + L +++ G D +++S+ T DG Y
Sbjct: 484 LARRSFLPMIVTRGSDQAQVSSSFGIRNDPGVVRNYGSLVTEFARITPDGVVVFFPSYLY 543
Query: 543 MEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRV 602
ME + + W+ G ++ K + VE + + L+ Y + G + R
Sbjct: 544 MESIISMWQGMGILDQIWNYKLILVETPDAQESS--LALETYRTACCNGRGAILFCVARG 601
Query: 603 KREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKY-NDTYRSS 661
K D + + G R + +G+PF + + ++ + YR
Sbjct: 602 KVSEGIDFD--------HHYG-------RAVLCIGVPFQYTESRILKARLEFLRENYR-- 644
Query: 662 KNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIK 721
+ N++ A R Q +GR +R + DYG ++L D RF ER R + KW+ +++
Sbjct: 645 ---IRENDFLSFDAIRHAAQCLGRVLRGKDDYGVMVLADRRF--ERKRPQLPKWINQAML 699
Query: 722 QYD---SFDASLEGLKSFFR 738
+ S D ++ K+F R
Sbjct: 700 DSETNLSTDMAVSNAKNFLR 719
>gi|452840050|gb|EME41988.1| hypothetical protein DOTSEDRAFT_72929 [Dothistroma septosporum
NZE10]
Length = 798
Score = 128 bits (321), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 178/800 (22%), Positives = 315/800 (39%), Gaps = 191/800 (23%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+++ + V FPY + Y Q +MC + TLD GHC +LE P+GTGK++SLL +
Sbjct: 3 FYIEDLPVLFPYPRIYPEQYAYMCDLKRTLDAG---GHC--VLEMPSGTGKTVSLLSLIV 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNK 136
A+QQ F PE++
Sbjct: 58 AYQQ------------------------------FYPEAR-------------------- 67
Query: 137 NVKKKMTPTIFYASRTHSQISQVISEYKK-TAYRVPMAV---------LASRKHYCTNKY 186
+ Y SRT S+I + ++E K YR L SRK+ C +
Sbjct: 68 --------KLIYCSRTMSEIEKALAELKALMKYRADQLGEVEDFRGLGLTSRKNLCLHPS 119
Query: 187 VRDKEN---IDEECKLLLG-----------DRNLGCPQFKNVHKVRGHPSLQKGGCHEVH 232
VR +++ +D C+ L D +L C N+ + H + G V
Sbjct: 120 VRREKSGSVVDARCRSLTAGFVKEKKERGEDVDL-CIYHDNLDLLEPHNLIPPG----VW 174
Query: 233 DIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDE 291
++ ++ G+ + C Y+ AR M ++ Y Y+++P I + ++ K I++ DE
Sbjct: 175 TLDGMLQYGEQHKQCPYFTARRMMPFCNVIIYSYHYLLDPKIAERVSKELSKDCIVVFDE 234
Query: 292 AHNIEDIARDAGSVDIDEDVLLKLQM---ELEQVCSVNPMIYQPLIEMTQDLVGWIE-RR 347
AHNI+++ ++ S+D+ ED L K LEQ + M ++ + +E R
Sbjct: 235 AHNIDNVCIESLSIDLTEDSLRKAARGASNLEQ--KITEMKDTDAEKLQNEYAKLVEGLR 292
Query: 348 KATLAKREFQHFFSCWTGDKALRELQEANISR--------QCFPILLECATKAIKEATDT 399
+A A+ E + D L+E NI R + F L+ K + ++T
Sbjct: 293 EADQARDEGAFMSNPALPDDLLKEAVPGNIRRAEHFTAFLKRFIEYLKTRMKVLHVISET 352
Query: 400 E-SELPHLSGMSVITLEGL------------------------FSSLTYFFSRNGSHVSD 434
S L HL ++ I + L + F + ++ +
Sbjct: 353 PPSFLQHLKELTFIEKKPLRFCAERLTSLVRTLELTNIEDYQPLQEVATFATLVATYDTG 412
Query: 435 YQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSS 494
+ L L+ Y + DS H CL+ A+ K V + S+I+TSGT+SP+ +
Sbjct: 413 FLLILEPY-ESDSATVANPILH---FTCLDAAIAIKPVFDRFSSVIITSGTISPLEMYPK 468
Query: 495 ELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYK------------------- 535
LG + E+ + L +++ G D P++++++
Sbjct: 469 MLGFE-AVVQESYAMTLARRSFLPMIVTRGADQAPISSNFQRRNDPNVVKNYGQLLIKFS 527
Query: 536 --TADG-------YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYN 586
T DG Y ME + + W+ G + K + VE SQE + L+ Y
Sbjct: 528 KLTPDGIVVFFPSYLYMESVISMWQNMGTLDEVWKSKLILVETP-DSQET-SLALETYRT 585
Query: 587 SISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDI 646
+ S G ++ R K D + + G R + +GIP+
Sbjct: 586 ACSNGRGAVLLCVARGKVSEGIDFD--------HHYG-------RTVLCIGIPYQYTESR 630
Query: 647 QVSLKKKY-NDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQE 705
+ + ++ +TYR + + + A R Q +GR +R + DYG +++ D+RF+
Sbjct: 631 ILKARLEFLQETYR-----IKDSTFLAFDAMRHCAQCLGRVLRGKDDYGIMVMADDRFK- 684
Query: 706 ERNRAHISKWLRKSIKQYDS 725
+ + + KW+ ++ DS
Sbjct: 685 -KRKEQLPKWIGSALMDADS 703
>gi|389638466|ref|XP_003716866.1| DNA repair helicase rad15 [Magnaporthe oryzae 70-15]
gi|351642685|gb|EHA50547.1| DNA repair helicase rad15 [Magnaporthe oryzae 70-15]
Length = 795
Score = 128 bits (321), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 178/794 (22%), Positives = 327/794 (41%), Gaps = 146/794 (18%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+++ + V FPY + Y Q +MC + TLD G+C +LE P+GTGK+ +LL +
Sbjct: 3 FYIDDLPVIFPYPRIYPEQYAYMCDLKKTLDVG---GNC--VLEMPSGTGKTATLLSLIV 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNK 136
A+QQ+ +L S + + E L N + G+
Sbjct: 58 AYQQHYPEHRKLIYCSRTMSEIEKALAELKNLMKY------------RAGELG------- 98
Query: 137 NVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE 196
K++ + SR + + + K A++ +R T +V++K+ E+
Sbjct: 99 --KEEDFRGLGLTSRKNLCLHPSVKREKSG------AIVDARCRGLTAGFVKEKKEKGED 150
Query: 197 CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMA 256
+L C N+ + H + G V +E L+ G+ + C Y+ +R M
Sbjct: 151 VEL--------CVYHDNLDLLEPHNLIPNG----VWTLEGLLRYGEEHKQCPYFTSRRMM 198
Query: 257 DDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLKL 315
++ Y Y+++P I + ++ + +I++ DEAHNI+++ ++ S DI ED L K
Sbjct: 199 QYCNVIIYSYHYLLDPKIAERVSKELSRDSIIVFDEAHNIDNVCIESLSTDITEDSLRKA 258
Query: 316 Q---MELEQVCSVNPMIYQPLIEMTQDLVGWIE-RRKATLAKREFQHFFSCWTGDKALRE 371
M LE+ +N M ++ + +E R+A A++E + D L+E
Sbjct: 259 SRGAMNLEK--RINEMRETDQNQLEDEYRKLVEGLREADEARQEDAFMSNPVLPDDLLKE 316
Query: 372 LQEANISR--------QCFPILLECATKAIKEATDT-ESELPHLSGMSVITLEGL----- 417
NI R + F L+ K ++ ++T S L HL + I + L
Sbjct: 317 AVPGNIRRAEHFVAFLKRFIEYLKTRMKVLEVISETPPSFLAHLKEYTFIEKKPLRFCAE 376
Query: 418 -------------------FSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTL 458
+ F + ++ + L L+ Y S+ P L
Sbjct: 377 RLTSLVRTLELTNIEDFQPLQEVATFATLVATYDKGFLLLLEPYESEKSQIPNP----VL 432
Query: 459 SLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQ-VL 517
CL+ A+ K V E ++I+TSGTLSP+ + LG F ++ + + + + L
Sbjct: 433 HFTCLDAAIAIKPVFERFKTVIITSGTLSPLEMYPKMLG--FDAVVQESYAMTLARRSFL 490
Query: 518 TSVISTGPDNYPLNASYKTADGYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDF 577
+++ G D +++S+ + ++ R GQ AK + P G
Sbjct: 491 PMIVTKGSDQASISSSFAVRNDPAVV-------RNYGQLLTEFAK----ITPDG-----M 534
Query: 578 EIVLKHYYN-----SISQGSKC--AVVRKKRVKREGNNDLNT---IESQENA--NKKGAS 625
+ Y+ S+ QG K + + K + E + T +E+ A N GA
Sbjct: 535 VVFFPSYFYMESIISMWQGMKILDEIWKYKLILVETPDAQETAVALETYRTACCNGTGAI 594
Query: 626 FLAVCRGKI---------------VVGIPFPNINDIQVSLKKKY-NDTYRSSKNLLSGNE 669
L V RGK+ +G+PF + + + ++ +TYR + N+
Sbjct: 595 MLCVARGKVSEGIDFDHQYGRTVLCIGVPFQYTESLILKARLEFLRETYR-----IREND 649
Query: 670 WYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYD---SF 726
+ A R Q +GR +R + DYG ++L D RF + R + KW+ +++ + D S
Sbjct: 650 FLSFDAMRHAAQCLGRVLRGKDDYGIMVLADRRFP--KKRPQLPKWINQALAESDVNMST 707
Query: 727 DASLEGLKSFFRDV 740
D ++ + F + +
Sbjct: 708 DMAVSAARKFLKSM 721
>gi|169625336|ref|XP_001806072.1| hypothetical protein SNOG_15940 [Phaeosphaeria nodorum SN15]
gi|160705637|gb|EAT76778.2| hypothetical protein SNOG_15940 [Phaeosphaeria nodorum SN15]
Length = 1396
Score = 128 bits (321), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 161/682 (23%), Positives = 262/682 (38%), Gaps = 160/682 (23%)
Query: 146 IFYASRTHSQISQVISEYKKTAYRVPMAV--------------------LASRKHYCTNK 185
IF+ SRTHSQ++Q SE + ++P A+ L SRK+ C N
Sbjct: 203 IFFCSRTHSQLTQFTSELGRV--KMPPAITPDDQDADVDRLVDDVKHLTLGSRKNLCINS 260
Query: 186 YVRDKEN---IDEEC-KLLLGDRNLG-CPQFKN------VHKVRGHPSLQKGGCHEVHDI 234
V N I+E C +L G CP N V+ R H ++ DI
Sbjct: 261 KVSRLGNATAINERCVELQQATSAEGKCPHMPNKESETLVNDFRDH------ALAKIRDI 314
Query: 235 EDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHN 294
EDL +G+ + C YYA+R P R A+ + +K ++I+DEAHN
Sbjct: 315 EDLGALGKKLGVCPYYASR-----------PAIQHCESTARDALGLSLKNHVVIIDEAHN 363
Query: 295 IEDIARDAGSVDIDED--------VLLKLQMELEQVCSVNPMIYQPLIEMTQDLVGWI-- 344
+ D SV + D + + LQ ++ N + + + ++G++
Sbjct: 364 LMDAIAGIYSVSVTLDQVQQARAQLTMYLQKFRNKLKGKNRVYVAQTVRILDSILGYLKT 423
Query: 345 --ERRKATLAKREFQHFFSCWTGD-----KALRELQEANISRQCFPILLECATKAIKEAT 397
+ +KAT + S D K LQE+ ++R+ + T A A
Sbjct: 424 ISDDKKATDGLVDMLTIMSGKGVDQVNIFKLNTYLQESRLARK----VDGYTTYAETVAN 479
Query: 398 DTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQK--------YIKRDSKN 449
DT + + +F HV + L+L Y K DS
Sbjct: 480 DTAK----------VGAKTMFQKAPRQNVPVLMHVQSFLLSLMNPSAEGRFFYSKEDS-- 527
Query: 450 PGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTC----LE 505
TL L+P FKD+ E + +++L GT+SPM+ + L + L
Sbjct: 528 -----CVTLRYMLLDPTYHFKDIVEEARAVVLAGGTMSPMSDYEQHLLPYLDSTKIMTLS 582
Query: 506 APHVID-VDLQVLTSVISTGPDNYP-------------------LNASYKTADG------ 539
HVI +L + V ++ + + L + DG
Sbjct: 583 CGHVIPPTNLLAIPVVRASSGNEFVFTFENRNKERTMIDLGHAILGTAQHIPDGVVVFFP 642
Query: 540 -YKLMEKLCNRWRETGQ-------WSRLNAKKPLFVE----------PKGGSQEDFEIVL 581
Y ++ W+ W R KP+F+E P + + VL
Sbjct: 643 SYSYLDACIAAWKRLAAAGSKVTFWDRFTQTKPIFLEQRSQPNVATQPVANKEAAVDSVL 702
Query: 582 KHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFP 641
Y +I+ G+ C + + + +N + A+ RG +VVG+PFP
Sbjct: 703 TAYSTAIASGNGCGALLFAVIGGTLSEGINFSD-------------ALGRGVVVVGLPFP 749
Query: 642 NINDIQVSLKKKYNDTY---RSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIIL 698
N + K +Y T R + +++ N RA+NQ +GR IRH+ DY AI++
Sbjct: 750 NPHSAGWKAKMQYISTKENKRGGDGKAAARDFFENACMRAVNQCVGRAIRHKGDYAAIMM 809
Query: 699 LDERFQEERNRAHISKWLRKSI 720
LD R+ +R + + KW+R S+
Sbjct: 810 LDRRYGTKRIQDKLPKWIRGSL 831
Score = 51.2 bits (121), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 33/56 (58%), Gaps = 5/56 (8%)
Query: 28 PYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCK 83
PY+PY Q FM V LD + + ESPTGTGKSLSL+C +L W ++ K
Sbjct: 13 PYEPYDIQNDFMNAVYDCLDAGKV-----GIFESPTGTGKSLSLICGSLTWLRDHK 63
>gi|71029556|ref|XP_764421.1| DNA repair helicase [Theileria parva strain Muguga]
gi|68351375|gb|EAN32138.1| DNA repair helicase, putative [Theileria parva]
Length = 962
Score = 128 bits (321), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 106/321 (33%), Positives = 164/321 (51%), Gaps = 28/321 (8%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLA-- 77
+ GI+V+FP+ PY Q +M VI T+ ++ +ALLESPTGTGK+LSLLCST+A
Sbjct: 11 IDGIEVKFPFHPYRCQRSYMENVIKTIKESK-----NALLESPTGTGKTLSLLCSTIATL 65
Query: 78 -WQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNK 136
W + K + + KPD + G + Q V++ ++
Sbjct: 66 LWNKMVKKVKKTKD-DIIKPDATKDVKVKKSEDGTVKSEQLEKESEKRWADFRAVSVLDQ 124
Query: 137 NVKKKMTP---TIFYASRTHSQISQVISEYKKTAYR-------VPMAVLASRKHYCTNKY 186
K ++ P I Y+SRTHSQ+ QVI E K+ Y + +LASR C N
Sbjct: 125 RKKVEIKPERIKIMYSSRTHSQLKQVIGEVWKSDYYEEFNPKGLKGVLLASRDLLCINP- 183
Query: 187 VRDK---ENIDEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQV 243
R K E + CK ++ +R C F + +RG + ++ + DIE++V G+
Sbjct: 184 SRGKMTGEVLANFCKQVIQERK--CEYF---NTMRGDKNAKQFQFERLMDIEEMVQTGKD 238
Query: 244 VRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAG 303
C Y++ + + A LV PY+YI++P IR AM++DIK +I+I+DEAHN E +A +
Sbjct: 239 GHFCPYFSVKEGQEHADLVLLPYNYILSPDIRDAMDIDIKDSIIIIDEAHNAEQVAEEGA 298
Query: 304 SVDIDEDVLLKLQMELEQVCS 324
S I + + K L + +
Sbjct: 299 SFGIKQTDIGKFIEALRRFAT 319
Score = 121 bits (303), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 97/327 (29%), Positives = 140/327 (42%), Gaps = 65/327 (19%)
Query: 457 TLSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELG---VQFGTCLEAPHVIDV 512
+ CL P F + + SIILTSGTL P+ LG V+F L+ HVID
Sbjct: 532 VFTFKCLQPVPTFVRLKNGGVRSIILTSGTLGPLEVLERHLGGGHVKFDVKLQNEHVIDP 591
Query: 513 DLQVLTSVISTGPDNYPLNASYKTAD----------------------------GYKLME 544
+ ++ D L++++ T + Y +M
Sbjct: 592 SRVWVGAISGNAEDPNMLSSTFNTRNKMNYITELGNAVLSFVKNVPGGVLVFFGSYSVMN 651
Query: 545 KLCNRWRETGQWSRLNAKKPLFVEPKGGSQED---------FEIVLKHYYNSISQGSKCA 595
+ W++ G +S++ K +++E + D EI K Y +I QG+
Sbjct: 652 YTASVWKKIGIYSKIEMFKRIYLEARPVENPDDKDAIPVTTMEIFEK-YKQNIDQGNGSV 710
Query: 596 VVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKY- 654
R + D + CRG V GIP+P+ D +LK Y
Sbjct: 711 FFAICRGRLAEGIDFSD---------------DYCRGIFVCGIPYPSRFDDNTALKMDYL 755
Query: 655 ----NDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRA 710
N TY S NL NEWY +QA RA+NQA+GR IRH DYGAI+L D RF+ +
Sbjct: 756 DKLSNKTYEKS-NL--ANEWYTSQAIRAINQAVGRSIRHDRDYGAILLADYRFKHIPVKP 812
Query: 711 HISKWLRKSIKQYDSFDASLEGLKSFF 737
++SKW+ +K Y D +E L SFF
Sbjct: 813 NLSKWVLNRLKLYTRMDECIESLSSFF 839
>gi|70996012|ref|XP_752761.1| TFIIH complex helicase Rad3 [Aspergillus fumigatus Af293]
gi|66850396|gb|EAL90723.1| TFIIH complex helicase Rad3, putative [Aspergillus fumigatus Af293]
gi|159131515|gb|EDP56628.1| TFIIH complex helicase Rad3, putative [Aspergillus fumigatus A1163]
Length = 770
Score = 127 bits (320), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 176/775 (22%), Positives = 321/775 (41%), Gaps = 155/775 (20%)
Query: 39 MCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCKLKNQLANISHSKPDT 98
MC + TLD GHC +LE P+GTGK++SLL +A+QQ+ +L S + +
Sbjct: 1 MCDLKKTLDAG---GHC--VLEMPSGTGKTVSLLSLIIAYQQHYPEHRKLIYCSRTMSEI 55
Query: 99 EAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAM-NNKNVKKKMTPTIFYASRTHSQIS 157
E L F + T G T++ + + +VK++ + T
Sbjct: 56 EKALAELKELMKFRSQQLGYTEDFRALGLTSRKNLCLHPSVKREKSGT------------ 103
Query: 158 QVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEECKLLLGDRNLGCPQFKNVHKV 217
V+ +R T +V++K+ E+ +L C +N+ +
Sbjct: 104 ----------------VVDARCRSLTAGFVKEKKERGEDVEL--------CIYHENLDLL 139
Query: 218 RGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGA 277
H + G V ++ L+ G+ + C Y++AR M ++ Y Y+++P I
Sbjct: 140 EPHNLVPPG----VFTLDGLLKYGEEHKQCPYFSARRMMPYCNVIIYSYHYLLDPKIAER 195
Query: 278 MEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLK-------LQMELEQVCSVNPMI 329
+ ++ K I++ DEAHNI+++ +A S+DI ED L K L+ ++ ++ S +
Sbjct: 196 VSRELSKDCIVVFDEAHNIDNVCIEALSIDITEDSLRKATRGANNLERKISEMKSSDAEK 255
Query: 330 YQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRELQEANISR-QCFPILLEC 388
Q E ++ + G R+A A+ E Q + D L+E NI R + F L+
Sbjct: 256 LQN--EYSKLVEGL---REAEQARDEDQFIANPVLPDDLLKEAVPGNIRRAEHFVAFLKR 310
Query: 389 ATKAIK---EATDTESELP-----HLSGMSVI-----------------TLEGL------ 417
+ +K + T T SE P H+ ++ I TLE +
Sbjct: 311 FIEYLKTRMKVTHTISETPPSFLTHVKDLTFIERKPLRFCAERLTSLVRTLELINIEDYQ 370
Query: 418 -FSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELS 476
+ F + ++ + L L+ + + P L CL+ A+ K V +
Sbjct: 371 PLQEVATFATLVSTYDKGFLLILEPFESETATVPNP----VLHFTCLDAAIAIKPVFDRF 426
Query: 477 LSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQ-VLTSVISTGPDNYPLNASYK 535
S+I+TSGTLSP+ + LG F T L+ + + + + L +++ G D +++S++
Sbjct: 427 SSVIITSGTLSPLEMYPKMLG--FPTVLQESYTMTLARRSFLPMIVTRGSDQAQISSSFQ 484
Query: 536 ---------------------TADG-------YKLMEKLCNRWRETGQWSRLNAKKPLFV 567
T DG Y ME + + W+ G + K + V
Sbjct: 485 IRNDPGVVRNYGNIVLEFSRITPDGIVVFFPSYLYMESIISMWQGMGILDSIWNYKLILV 544
Query: 568 EPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFL 627
E + + L+ Y + G + R K D + + G
Sbjct: 545 ETPDAQESS--LALETYRTACCNGRGAILFCVARGKVSEGIDFD--------HHYG---- 590
Query: 628 AVCRGKIVVGIPFPNINDIQVSLKKKY-NDTYRSSKNLLSGNEWYCNQAFRALNQAIGRC 686
R + +G+PF + + ++ + YR + N++ A R Q +GR
Sbjct: 591 ---RAVLCIGVPFQYTESRILKARLEFLRENYR-----IRENDFLSFDAMRHAAQCLGRV 642
Query: 687 IRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYD---SFDASLEGLKSFFR 738
+R + DYG ++L D RFQ++RN+ + KW+ +++ + + S D ++ K+F R
Sbjct: 643 LRGKDDYGIMVLADRRFQKKRNQ--LPKWISQAMLESETNLSTDMAVATAKNFLR 695
>gi|395743927|ref|XP_002822926.2| PREDICTED: DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11, partial
[Pongo abelii]
Length = 636
Score = 127 bits (320), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 148/644 (22%), Positives = 254/644 (39%), Gaps = 159/644 (24%)
Query: 203 DRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLV 262
++ + CP F N H+ G L+ EV DIE L+ +G+ R C YY +R AQLV
Sbjct: 40 EKQVACP-FYN-HEQMG--LLRDEALAEVKDIEQLLALGKEARACPYYGSRLAIPAAQLV 95
Query: 263 FCPYSYIINPV-------------------------IRGAMEVDIKGAILILDEAHNIED 297
PY +++ I G V++ G+ L + ++
Sbjct: 96 VLPYQMLLHAATRQAAGIRLQDQVVIIDEAHNLIDTITGMHSVEVSGSQLCQAHSQLLQY 155
Query: 298 IARDAGSVDIDEDVLLKLQMEL-------------------------EQVCSVNPMIYQP 332
+ R + + LK + L ++ ++N ++Q
Sbjct: 156 MERYGKRLKAKNLMYLKQILYLLEKFVAVLGGNIKQNPNTQSLSQTGTELKTINDFLFQS 215
Query: 333 LIE---------------MTQDLVGWIERRKATLAKRE------FQHFFSCWTGDKALRE 371
I+ +++ L G+ ER A L+ RE FQ F L+
Sbjct: 216 QIDNINLFKVQRYCEKSMISRKLFGFTERYGAVLSSREQPKLAGFQQF---------LQS 266
Query: 372 LQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSH 431
LQ T+A+ D ++ +EG ++LT +++G
Sbjct: 267 LQPR-------------MTEALAAPADESQASAPRPASPLMHIEGFLAALTAA-NQDGRV 312
Query: 432 VSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNS 491
+ Q +L + TL LNPAV F V + ++++ GT+ P++
Sbjct: 313 ILSRQGSLSQ--------------STLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPVSD 358
Query: 492 FSSEL----GVQFGTCLE--APHVIDVDLQVLTSVISTGPDNYPLNASYKTADGYKLMEK 545
F +L GV+ +E HVI D +L VI +G N PL +++ + ++M++
Sbjct: 359 FRQQLLACAGVEAERVVEFSCGHVIPPD-NILPLVICSGISNQPLEFTFQKRELPQMMDE 417
Query: 546 ----LCN------------------------RWRETGQWSRLNAKKPLFVEPKGGSQEDF 577
LCN W + G RL A+K +F EPK Q
Sbjct: 418 AGRILCNLCGVVPGGVVCFFSSYEYLRQVHAHWEKGGLLGRLAARKKIFQEPKSAHQ--V 475
Query: 578 EIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVG 637
E VL Y I C ++R + G L+ + + + + L C ++VG
Sbjct: 476 EQVLVAYSRCIQ---ACG---QERGRVTGALLLSVVGGKMSEGINFSDNLGRC--VVMVG 527
Query: 638 IPFPNINDIQVSLKKKYNDTY--RSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGA 695
+PFPNI ++ K Y D R+ G N +A+NQ+IGR IRH+ D+ +
Sbjct: 528 MPFPNIRSPELQEKIAYLDQTLPRAPGQAPPGKALVENLCMKAVNQSIGRAIRHQKDFAS 587
Query: 696 IILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFRD 739
I+LLD+R+ A + W++ ++ +F ++ ++ F R+
Sbjct: 588 IVLLDQRYARPPVLAKLPAWIQAHVEVKATFGPAIAAVQKFHRE 631
>gi|383850774|ref|XP_003700951.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit-like [Megachile rotundata]
Length = 759
Score = 127 bits (320), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 179/795 (22%), Positives = 303/795 (38%), Gaps = 192/795 (24%)
Query: 20 VGGIQVEFPYQ-PYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
V G+ V FPY Y Q +M + LD GHC LLE P+GTGK+++LL +A+
Sbjct: 5 VDGLLVYFPYDYIYPEQYAYMLELKRALDAK---GHC--LLEMPSGTGKTITLLSLIVAY 59
Query: 79 QQNCKLK-NQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKN 137
L +L S + P+ E V + L + + S P G
Sbjct: 60 MLENPLDITKLIYCSRTVPEIEKVIEELKKLMDYYEKETGSK--PKIVG----------- 106
Query: 138 VKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEEC 197
+ +SR + I +S ++ ++ R H T YVR++ N DE
Sbjct: 107 --------LVLSSRKNMCIHPEVSREREGK------IVDGRCHALTASYVRERHNYDEST 152
Query: 198 KLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMAD 257
+ C F + G L G ++ I+DL + G+ C Y+ AR
Sbjct: 153 PI--------C-NFYEGFDMEGKEQLMPPG---IYSIDDLKDYGRDRNWCPYFLARFTIL 200
Query: 258 DAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQ 316
AQ+V Y Y+++P I ++ ++ K ++++ DEAHNI+++ D+ SV I+ +
Sbjct: 201 HAQIVVYSYHYLLDPKIAESVSKELSKSSVVVFDEAHNIDNVCIDSMSVKINRRI----- 255
Query: 317 MELEQVCSVNPMIYQPLIEMTQDLVG--------WIERRKATLAKREFQHFFS-CWTGDK 367
LE+ + ++ + + EM +D V +E K RE + D+
Sbjct: 256 --LEKSSANIQLLEKTVAEMREDDVNKLKEEYDRLVEGLKDARVARETDIILANPVLPDE 313
Query: 368 ALRELQEANISRQCFPILLECATKAIKEATDTESELPHLS-------------------- 407
L+E+ NI I C K E T + H+
Sbjct: 314 VLQEVIPGNIRNAEHFI---CFLKRFVEYLKTRLRVQHVVQESPAAFLRDVQAKVSIERK 370
Query: 408 ---------GMSVITLEGLFSSLTYF-----FSRNGSHVSDYQLALQKYIK-RDSKNPGG 452
G + T+E + LT F + + VS Y ++ D K+P
Sbjct: 371 LLRFCAERLGSFLRTME--ITDLTDFSPIILVTHLATLVSTYTKGFTIIVEPFDDKSPTV 428
Query: 453 NWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQ------FGTCLEA 506
L CL+ ++ K + + S+++TSGTLSP++ + L F L
Sbjct: 429 -LNPILHFSCLDSSIAMKPIFDRFQSVVITSGTLSPLDMYPKILNFHPVIMSSFTMTLAR 487
Query: 507 PHVIDVDLQVLTSVISTGPDNYPLNASYKT---------------------ADG------ 539
P + L +++ G D +++ Y+T DG
Sbjct: 488 PCL-------LPMIVAKGNDQVTISSKYETREDVAVIRNYGQLLVEFAATVPDGLVCFFT 540
Query: 540 -YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVR 598
Y ME + W + G +L K LF+E + ++ ++
Sbjct: 541 SYLYMESVVAAWYDQGVVDQLQRHKLLFIETQDSAETSLALI------------------ 582
Query: 599 KKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPF-------------PNIND 645
N I++ EN +GA L+V RGK+ G+ F P +
Sbjct: 583 ------------NYIKACENG--RGAVLLSVARGKVSEGVDFDHHLGRAVLMFGIPYVYT 628
Query: 646 IQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQE 705
LK + Y + + N++ A R Q +GR IR + DYG ++ D+RF
Sbjct: 629 QSRILKARLE--YLRDQFQIRENDFLTFDAMRHAAQCVGRAIRGKTDYGIMVFADKRFSR 686
Query: 706 ERNRAHISKWLRKSI 720
R+ + KW+++ +
Sbjct: 687 IDKRSKLPKWIQEHL 701
>gi|340710930|ref|XP_003394036.1| PREDICTED: LOW QUALITY PROTEIN: TFIIH basal transcription factor
complex helicase XPD subunit-like [Bombus terrestris]
Length = 759
Score = 127 bits (320), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 179/800 (22%), Positives = 304/800 (38%), Gaps = 202/800 (25%)
Query: 20 VGGIQVEFPYQ-PYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
V G+ V FPY Y Q +M + LD GHC LLE P+GTGK+++LL +A+
Sbjct: 5 VDGLLVYFPYDYIYPEQYAYMLELKRGLDAK---GHC--LLEMPSGTGKTITLLSLIVAY 59
Query: 79 QQNCKLK-NQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKN 137
L +L S + P+ E V + L + + S P G
Sbjct: 60 MLENPLDVTKLIYCSRTVPEIEKVIEELKKLMDYYEKETGSK--PKIVG----------- 106
Query: 138 VKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEEC 197
+ +SR + I +S ++ ++ R H T YVR++ N DE
Sbjct: 107 --------LVLSSRKNMCIHPEVSREREGK------IVDGRCHSLTASYVRERHNYDEST 152
Query: 198 KLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMAD 257
+ C F + G G ++ I+DL G+ C Y+ AR
Sbjct: 153 PI--------C-NFYEGFDMEGKEQFMPPG---IYSIDDLKEYGRDRNWCPYFLARFTIL 200
Query: 258 DAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDID-------- 308
AQ+V Y Y+++P I + ++ K ++++ DEAHNI+++ D+ SV I+
Sbjct: 201 HAQIVVYSYHYLLDPKIAETVSKELSKSSVVVFDEAHNIDNVCIDSMSVKINRRTLEKSS 260
Query: 309 --------------EDVLLKLQMELEQVCS---------------VNPMIYQPLIEMT-- 337
ED + KL+ E E++ NP++ +++
Sbjct: 261 ANIQLLEKTVAEMREDDVNKLKEEYERLVEGLKDAHVARETDIILANPVLPDEILQEVVP 320
Query: 338 ------QDLVGWIERRKATLAKR-EFQHFFSCWTGDKALRELQ-EANISRQCFPILLECA 389
+ VG++ R L R QH + LR++Q + +I R+ E
Sbjct: 321 GNIRNAEHFVGFLRRFVEYLKTRLRVQHVVQ-ESPAAFLRDVQTKVSIERKPLRFCAERL 379
Query: 390 TKAIK--EATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDS 447
++ E TD P + V L L S+ T F+ + ++ + D
Sbjct: 380 ASLLRTMEITDLTDFSP---AILVTHLATLVSTYTKGFT----------IIVEPF---DD 423
Query: 448 KNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQ------FG 501
K P L CL+ ++ K + + S+++TSGTLSP++ + L F
Sbjct: 424 KTP-NVLNPILHFVCLDSSIAIKPIFDRFQSVVITSGTLSPLDMYPKILNFHPVIMSSFT 482
Query: 502 TCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKT---------------------ADG- 539
L P +L +++ G D +++ Y+T DG
Sbjct: 483 MTLARP-------CLLPMIVAKGNDQVAISSKYETREDVAVIRNYGQLLVEFAATVPDGL 535
Query: 540 ------YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSK 593
Y ME + W + G +L K LF+E + ++ ++
Sbjct: 536 VCFFTSYLYMESVVAAWYDQGVVDQLQRHKLLFIETQDSAETSLALI------------- 582
Query: 594 CAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPF------------- 640
N I + EN +GA L+V RGK+ G+ F
Sbjct: 583 -----------------NYIRACENG--RGAVLLSVARGKVSEGVDFDHHLGRAVLMFGI 623
Query: 641 PNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLD 700
P + LK + Y + + N++ A R Q +GR IR + DYG ++ D
Sbjct: 624 PYVYTQSRILKARLE--YLRDQFQIRENDFLTFDAMRHAAQCVGRAIRGKTDYGIMVFAD 681
Query: 701 ERFQEERNRAHISKWLRKSI 720
+RF R+ + KW+++ +
Sbjct: 682 KRFSRMDKRSKLPKWIQEHL 701
>gi|194754721|ref|XP_001959643.1| GF11940 [Drosophila ananassae]
gi|190620941|gb|EDV36465.1| GF11940 [Drosophila ananassae]
Length = 770
Score = 127 bits (320), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 183/788 (23%), Positives = 318/788 (40%), Gaps = 169/788 (21%)
Query: 20 VGGIQVEFPYQ-PYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
V G+ V FPY+ Y Q +M + +LD GHC LLE P+GTGK+ +LL +A+
Sbjct: 5 VDGLLVYFPYEYIYPEQYAYMLELKRSLDAK---GHC--LLEMPSGTGKTATLLSLIVAY 59
Query: 79 Q-QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKN 137
+ + +L S + P+ E V L N + + P+ PP G
Sbjct: 60 MVEYPETVRKLIYCSRTVPEIEKVIAELQNLMAYYERNCPN--PPPFTG----------- 106
Query: 138 VKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEEC 197
+ +SR + I +S+ ++ + + + T Y+RD+ +D E
Sbjct: 107 --------LVLSSRKNMCIHPEVSKEREGK------AVDGKCYGLTASYIRDRHEMDSET 152
Query: 198 KLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMAD 257
+ C Q+ + G S G V+ I+DL G+ C Y+ AR
Sbjct: 153 PI--------C-QYYEGFTLEGKESTLPVG---VYSIDDLKEYGRSRNWCPYFLARYAIA 200
Query: 258 DAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQ 316
A +V Y Y+++P I + ++ + + ++ DEAHNI+++ D+ SV I+ + +
Sbjct: 201 HAHIVVYSYHYLLDPKIAQVVSKEMTRESCVVFDEAHNIDNVCIDSMSVKINRRTVERST 260
Query: 317 MELEQVCSVNPMI-----------YQPLIEMTQDLVGWIERRKATLAK------------ 353
L Q+ + I YQ +++ +D ++R +
Sbjct: 261 NALNQLTKLVQDIREEDTNRLNEEYQRMVQGLKD--ASVQRETDMILANPVLPNDVLTEV 318
Query: 354 -----REFQHFFSCW--------TGDKALRELQEA------NISRQCFPILLECATKAIK 394
R HF S T + +QE+ +IS + I +E K ++
Sbjct: 319 VPGNIRNADHFLSFLRRFIEYIKTRLRVHHVVQESPAGFLKDISSK---ICIE--RKPLR 373
Query: 395 EATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNW 454
+ S L +S +T G + +T+F + VS Y I D K P +
Sbjct: 374 FCAERLSSLLRTLEISDMTEYGALTLITHF----ATLVSTYTKGFTIIIDLDDKTPTVS- 428
Query: 455 THTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDL 514
L CL+ ++ V ++++TSGTLSPM+ + P ++D D
Sbjct: 429 NPILHFSCLDSSIAMAPVFSRFQTVVITSGTLSPMDMY--------------PKILDFDP 474
Query: 515 QVLTS-------------VISTGPDNYPLNASYKTADGYKLMEKLCNRWRETGQWSRLNA 561
V++S ++S G D +++ ++T + ++ R GQ A
Sbjct: 475 VVMSSFTMTLARPCLLPMIVSKGNDQVTISSKFETREDTAVI-------RNYGQLLVEVA 527
Query: 562 KKPLFVEPKG-----GSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQ 616
K P G S E V+ +Y+ QG ++R K + E ++ T +
Sbjct: 528 KTV----PDGIVCFFTSYLYLESVVASWYD---QGIVDTLLRYKLLFIETQDNAETSYAL 580
Query: 617 ENANK-----KGASFLAVCRGKIVVGIPF-------------PNINDIQVSLKKKYNDTY 658
N K +GA LAV RGK+ G+ F P + LK + + Y
Sbjct: 581 MNYVKACDCGRGAVLLAVARGKVSEGVDFDHHYGRAVLMFGIPYVYTQSRILKARLD--Y 638
Query: 659 RSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRK 718
+ + N++ A R Q +GR +R + DYG +I D+RF + R+ + KW+++
Sbjct: 639 LRDQFQIRENDFLTFDAMRHAAQCVGRALRGKTDYGIMIFADKRFSRQDKRSRLPKWIQE 698
Query: 719 SIKQYDSF 726
+ DSF
Sbjct: 699 HL--VDSF 704
>gi|440635897|gb|ELR05816.1| DNA repair helicase rad15 [Geomyces destructans 20631-21]
Length = 795
Score = 127 bits (320), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 176/797 (22%), Positives = 321/797 (40%), Gaps = 152/797 (19%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+++ + V FPY + Y Q +MC + TLD GHC +LE P+GTGK++SLL +
Sbjct: 3 FNIDDLPVLFPYPRIYPEQYAYMCDLKRTLDAG---GHC--VLEMPSGTGKTVSLLSLIV 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNK 136
A+QQ +L S + + E + + N +T Q+ +
Sbjct: 58 AYQQYYPEHRKLIYCSRTMSEIEKAL---------------AELKALMNYRTEQLGRVEE 102
Query: 137 NVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE 196
+T SR + + + K A ++ +R T +V+DK+ E+
Sbjct: 103 FRGLGLT------SRKNLCLHPSVKREKSGA------IVDARCRSLTAGFVKDKKENGED 150
Query: 197 CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMA 256
+L C +N+ + H + G V ++ ++ G+ + C Y+ +R M
Sbjct: 151 VEL--------CTYHENLDLLEPHDLIPNG----VWTLDGIMRYGEEHKQCPYFTSRRMM 198
Query: 257 DDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLKL 315
++ Y Y+++P I + ++ K I++ DEAHNI+++ ++ S DI ED L K
Sbjct: 199 PFCNVIIYSYHYLLDPKIAERVSKELSKDCIVVFDEAHNIDNVCIESLSTDITEDSLRKA 258
Query: 316 ---QMELE-QVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRE 371
LE ++C + + L LV + R+A A+ E + D L+E
Sbjct: 259 TRGAQNLETKICEIKDTDAEKLQNEYAKLVEGL--READEAREEDTFMSNPALPDDLLKE 316
Query: 372 LQEANISR-QCFPILLECATKAIKEATDTE--------SELPHLSGMSVITLEGL----- 417
NI R + F L+ + +K S L HL + I + L
Sbjct: 317 AVPGNIRRAEHFVAFLKRFVEYLKTRMRVRQVISETPLSFLAHLKETTFIERKPLRFCAE 376
Query: 418 -FSSLTYFFSRNGSHVSDYQ--------------------LALQKYIKRDSKNPGGNWTH 456
+SL + +++ DYQ L L+ Y ++ P
Sbjct: 377 RLTSLVR--TLELTNIEDYQPLQQVATFATLVATYEKGFLLILEPYESDTAEVPNP---- 430
Query: 457 TLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQ- 515
L CL+ A+ K V + S+I+TSGTLSP+ + L F T ++ + + + +
Sbjct: 431 VLHFTCLDAAIAIKPVFDRFSSVIITSGTLSPLEMYPKMLN--FTTVVQETYQMTLARRS 488
Query: 516 VLTSVISTGPDNYPLNASYK---------------------TADG-------YKLMEKLC 547
L +++ G D +++ ++ T DG Y ME +
Sbjct: 489 FLPMIVTRGSDQVAISSGFQVRNEPSVVRNYGNLLTEFSKITPDGMVVFFPSYLYMESII 548
Query: 548 NRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGN 607
+ W+ G + K + VE + + L+ Y + G ++ R K
Sbjct: 549 SMWQGMGILDEVWKYKLILVETPDAQETS--LALETYRTACCNGRGAILLCVARGKVSEG 606
Query: 608 NDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKY-NDTYRSSKNLLS 666
D + ++ G + L +G+PF + + ++ +TYR +
Sbjct: 607 IDFD--------HQYGRTVLC-------IGVPFQYTESRILKARLEFLRETYR-----IR 646
Query: 667 GNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYD-- 724
N++ A R +Q +GR +R + DYG ++L D RF + RA + W+ ++ D
Sbjct: 647 ENDFLSFDAMRHASQCLGRVLRGKDDYGIMVLADRRFM--KKRAQLPSWINNAVMDSDTN 704
Query: 725 -SFDASLEGLKSFFRDV 740
S D ++ K F +++
Sbjct: 705 LSIDMAVSSAKKFLKNI 721
>gi|380014617|ref|XP_003691322.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit-like [Apis florea]
Length = 759
Score = 127 bits (320), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 174/798 (21%), Positives = 307/798 (38%), Gaps = 198/798 (24%)
Query: 20 VGGIQVEFPYQ-PYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
V G+ V FPY Y Q +M + LD GHC LLE P+GTGK+++LL +A+
Sbjct: 5 VDGLLVYFPYDYIYPEQYAYMLELKRGLDAK---GHC--LLEMPSGTGKTITLLSLIVAY 59
Query: 79 QQNCKLK-NQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKN 137
L +L S + P+ E V + L + + + P G
Sbjct: 60 MLENPLDVTKLIYCSRTVPEIEKVIEELKKLMDYYEKETENK--PKIVG----------- 106
Query: 138 VKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEEC 197
+ +SR + I +S ++ ++ R H T YVR++ N D+
Sbjct: 107 --------LVLSSRKNMCIHPEVSREREGK------IVDGRCHSLTASYVRERHNYDDST 152
Query: 198 KLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMAD 257
+ C F + G + G ++ I+DL G+ C Y+ AR
Sbjct: 153 PI--------C-NFYEGFDMEGKEQIMPSG---IYSIDDLKEYGKDRNWCPYFLARFTIL 200
Query: 258 DAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDID-------- 308
AQ+V Y Y+++P I + ++ K +++I DEAHNI+++ D+ SV I+
Sbjct: 201 HAQIVVYSYHYLLDPKIAETVSRELSKNSVVIFDEAHNIDNVCIDSMSVKINRRTLEKSS 260
Query: 309 --------------EDVLLKLQMELEQVCS---------------VNPMIYQPLIEMT-- 337
ED + KL+ E E++ NP++ +++
Sbjct: 261 ANIQLLEKTVAEMREDDVNKLKEEYERLVEGLKDAHVARETDIILANPVLPNEVLQEVVP 320
Query: 338 ------QDLVGWIERRKATLAKR-EFQHFFSCWTGDKALRELQ-EANISRQCFPILLECA 389
+ V +++R L R QH + LR++Q + +I R+ E
Sbjct: 321 GNIRNAEHFVSFLKRFVEYLKTRLRVQHVVQ-ESPAAFLRDVQTKVSIERKPLRFCAERL 379
Query: 390 TKAIKEATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKN 449
++ E+ L+ S I L +T+ + ++ + + ++ + D K
Sbjct: 380 ASLLRTM-----EITDLTDFSPIIL------VTHLATLVSTYTKGFTIIVEPF---DDKT 425
Query: 450 PGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQ------FGTC 503
P L CL+ ++ K + + S+++TSGTLSP++ + L F
Sbjct: 426 PNV-LNPILHFVCLDSSIAMKPIFDRFQSVVITSGTLSPLDMYPKILNFHPVIMSSFTMT 484
Query: 504 LEAPHVIDVDLQVLTSVISTGPDNYPLNASYKT---------------------ADG--- 539
L P +L +++ G D +++ Y+T DG
Sbjct: 485 LARP-------CLLPMIVAKGNDQVAISSKYETREDVAVIRNYGQLLVEFAATVPDGLVC 537
Query: 540 ----YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCA 595
Y ME + W + G +L K LF+E + ++ ++
Sbjct: 538 FFTSYLYMESVVAAWYDQGVVDQLQRHKLLFIETQDSAETSLALI--------------- 582
Query: 596 VVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPF-------------PN 642
N I++ EN +GA L+V RGK+ G+ F P
Sbjct: 583 ---------------NYIKACENG--RGAVLLSVARGKVSEGVDFDHHLGRAVLMFGIPY 625
Query: 643 INDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDER 702
+ LK + Y + + N++ A R Q +GR IR + DYG +I D+R
Sbjct: 626 VYTQSRILKARLE--YLRDQFQIRENDFLTFDAMRHAAQCVGRAIRGKTDYGIMIFADKR 683
Query: 703 FQEERNRAHISKWLRKSI 720
F R+ + KW+++ +
Sbjct: 684 FSRVDKRSKLPKWIQEHL 701
>gi|449328753|gb|AGE95029.1| ATP dependent DNA binding helicase [Encephalitozoon cuniculi]
Length = 619
Score = 127 bits (320), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 159/697 (22%), Positives = 271/697 (38%), Gaps = 151/697 (21%)
Query: 57 ALLESPTGTGKSLSLLCSTLAWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQ 116
+ SPTGTGK++SLL + + + A+ + P A+ L GG
Sbjct: 27 GIFSSPTGTGKTMSLLSAVIDYIG--------ADEAGLDPRNRALEQALFQGG------- 71
Query: 117 PSTIPPSTNGQTAQVAMNNKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLA 176
+M + Y +RTH+Q++Q I+E KK VL
Sbjct: 72 ------------------------RMK--VLYCTRTHTQLTQAINELKKLEAGCNSVVLG 105
Query: 177 SRKHYCTNKYV---RDKENIDEECKLLLGDRNL----GCPQFKNVHKVRGHPSLQKGGCH 229
SR+ YC N+ V R + ++E CK + + GC F H
Sbjct: 106 SRRIYCLNERVCQNRSSDAVNEGCKEAVKEGLCVFYDGCDLFDG---------------H 150
Query: 230 EVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILIL 289
V D+EDLV +G+ R C YY ++ + +VF PY + R +M +D++ +I+++
Sbjct: 151 GVLDVEDLVAMGRNERLCPYYVSKRYSQQCDIVFLPYQLLFTREGRKSMGIDVRESIVVV 210
Query: 290 DEAHNIEDIARDAGSVDIDEDVLLKLQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKA 349
DEAHNI D ++++ ++N I +++ ++ G +R+
Sbjct: 211 DEAHNIY-------------DSVVQMNTACILFSTMNRCI--KAMQLYRERHGRRMKREG 255
Query: 350 TLAK-----REFQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELP 404
L R + F GD+ ++ E LL+ I++ E E
Sbjct: 256 QLETVVEILRRIKGF-----GDEYCGDVGEGEGVMGVSEFLLK---AGIEDFNMLEVE-- 305
Query: 405 HLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLN 464
I G+F L F S + + L D + + L+
Sbjct: 306 -----DYIVTSGIFRRLEGFGSNPSLQIPEISKFLGLLTVSDRSGRIFYSSRGVRFTPLD 360
Query: 465 PAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTG 524
++ F+DV E +++L GT+ P++ S LG + + + L V+ +G
Sbjct: 361 ASMYFEDVLECR-ALLLAGGTMEPVDQLMSVLGKKSPRYFSYGSICN---DFLALVMGSG 416
Query: 525 PDNYPLNASYKT-------ADGYKLMEKLCNRWRETGQWSRLNAKKPL---------FVE 568
P + +++T D + L N ++ G L +K L V
Sbjct: 417 PSGREIIVNFETRERPESIKDVTSSISNLSNAVKDGGMVCFLPSKAYLGILRERCGDMVG 476
Query: 569 PKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLA 628
K ED I + Y +G EG N +
Sbjct: 477 TKKALYEDL-ITFEGYAEEAGRGPCILFAVMGGRLSEGVNFGD----------------G 519
Query: 629 VCRGKIVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIR 688
+CR +VVG+P+P D+++ + K+N G E+ + A R +NQ +GR +R
Sbjct: 520 LCRLLVVVGVPYPT-QDLELKERAKFN-----------GGEYATSIAMRTVNQTLGRALR 567
Query: 689 HRFDYGAIILLDERF-QEERNRAHISKWLRKSIKQYD 724
HR DY ++LLD+R+ Q R +S W+R+ + D
Sbjct: 568 HRNDYAVLVLLDKRYIQLSR---LVSPWIREKVVHCD 601
>gi|384251189|gb|EIE24667.1| DNA repair helicase [Coccomyxa subellipsoidea C-169]
Length = 827
Score = 127 bits (320), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 164/697 (23%), Positives = 281/697 (40%), Gaps = 136/697 (19%)
Query: 146 IFYASRTHSQISQVISEYKKTAYRVPMAV--LASRKHYCTNKYVRDKEN---IDEECKLL 200
+++ SRTHSQ+SQ +SE +T + +V +ASRK C N V+ N I+E+C L
Sbjct: 165 VYFCSRTHSQLSQFVSELHRTPFAASFSVATVASRKALCINDSVQRLGNATRINEKCLDL 224
Query: 201 LGDRNL-------------------GCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVG 241
+ GCP F+ + + L+ D+ED+ +G
Sbjct: 225 QSGKGRKKVVTEAQGNTKASSKSHSGCP-FRKAN-MTSQRQLKDTVLAMPMDVEDMARLG 282
Query: 242 QVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARD 301
+ C YYAAR+ +A LV PY ++ R ++ V ++G ++++DEAHN+ D +
Sbjct: 283 RRKELCPYYAARAALPEADLVLLPYPALLLKETRESLGVRLEGNVVVVDEAHNLVDAVNN 342
Query: 302 AGSVDIDEDVLLKLQMELEQ--------VCSVNPMIYQPLIEMTQDLVGWIERRKATLAK 353
S I L LE + N Q L+ + L R
Sbjct: 343 VHSALITAQQLATAHSALESYYQRFRALLAPGNSKHIQTLMCLASTLQKCWNRPSGAAGT 402
Query: 354 R--EFQHFFSCWTGD-----KALRELQEANISRQCFPILLECATKAIKE----ATDTESE 402
R F D + +R ++E+ + + + +A E ATD +++
Sbjct: 403 RLDTVNDFLFSMELDNMNFFRLIRYIKESKVLVKIAGYADATSARAGDEVTPNATDGQTQ 462
Query: 403 LPHLSGMSVI-TLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLW 461
SGMS + L GL S+L + +D ++ + K TL
Sbjct: 463 SDGGSGMSSLHALVGLASALN-------NADADGRIIVDTAAK------------TLKFV 503
Query: 462 CLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSEL--GV------QFGTCLEAPHVIDVD 513
LN F V + +++L SGTL+P++S +L G+ QF +C HV+ +
Sbjct: 504 LLNAGAHFVQVLASAHAVVLASGTLAPVSSLKQQLFPGLPATQLHQF-SC---GHVVPKE 559
Query: 514 LQVLTSVISTGPDNYPLN------ASYKTADGY-KLMEKLCN------------------ 548
++L + GP L+ A + D L+ +C
Sbjct: 560 -RLLAVALGRGPTGATLDLRHEQRAQSSSMDEIGTLLTNICQAVPQGVVAFFPSFAYADA 618
Query: 549 ---RWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKRE 605
W+ +G + L +KK +F EP+ S + E VL+ +S A + +
Sbjct: 619 VYAHWQSSGALAALRSKKHVFREPR--SSVEVEAVLRQ----VSSLYHIAHLAQMEKGPS 672
Query: 606 GNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYNDTYRSSKNLL 665
G L + + + A + C ++VG+PFPN D ++ + ++ DT +S
Sbjct: 673 GALLLCVVGGKMSEGINFADGMGRC--VVMVGMPFPNPTDPELCERMRFMDTCAASTPAA 730
Query: 666 -------------------SGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEE 706
G E++ + +A+NQ IGR IRHR D+ AI+L D R+
Sbjct: 731 CTDTSSAAGDGVAPISASSPGREYFEDLCMKAVNQCIGRVIRHRGDWAAILLADVRWTAG 790
Query: 707 RNRAHISK---WLRKSIKQYDSFDASLEGLKSFFRDV 740
+ K W+++S+ F + ++ F R +
Sbjct: 791 GANKPLRKLPGWIQESLVVASGFGDAYSRIRRFVRSM 827
Score = 43.1 bits (100), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 18/25 (72%), Positives = 22/25 (88%)
Query: 57 ALLESPTGTGKSLSLLCSTLAWQQN 81
LLESPTGTGK+LSL+CSTL W ++
Sbjct: 14 GLLESPTGTGKTLSLICSTLQWLED 38
>gi|449299736|gb|EMC95749.1| hypothetical protein BAUCODRAFT_502978 [Baudoinia compniacensis
UAMH 10762]
Length = 803
Score = 127 bits (320), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 188/854 (22%), Positives = 346/854 (40%), Gaps = 190/854 (22%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+ + + V FPY + Y Q +M + TLD GHC +LE P+GTGK++SLL +
Sbjct: 3 FMIDDLPVLFPYPRIYPEQYAYMSDLKRTLDAG---GHC--VLEMPSGTGKTVSLLSLIV 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNK 136
A+QQ F PE +
Sbjct: 58 AYQQ------------------------------FYPEHR-------------------- 67
Query: 137 NVKKKMTPTIFYASRTHSQISQVISEYKK-TAYRVPMAV---------LASRKHYCTNKY 186
+ Y SRT S+I + ++E K YR L SRK+ C +
Sbjct: 68 --------KLIYCSRTMSEIEKALAELKALMKYRADQLGEVEDFRGLGLTSRKNLCLHPS 119
Query: 187 VRDKEN---IDEECKLLLG-----------DRNLGCPQFKNVHKVRGHPSLQKGGCHEVH 232
V+ +++ +D C+ L D +L C N+ + H + G V
Sbjct: 120 VKREKSGSVVDARCRSLTAGFVKEKKERGEDVDL-CIYHDNLDLLEPHNLIPPG----VW 174
Query: 233 DIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDE 291
++ ++ G+ + C Y+ AR M ++ Y Y+++P I + ++ K I++ DE
Sbjct: 175 TLDGMLRYGEQHKQCPYFTARRMMPFCNVIIYSYHYLLDPKIAERVSRELSKDCIVVFDE 234
Query: 292 AHNIEDIARDAGSVDIDEDVLLK-------LQMELEQVCSVNPMIYQPLIEMTQDLVGWI 344
AHNI+++ ++ S+D+ E+ L + L+ +++Q+ + ++ + +
Sbjct: 235 AHNIDNVCIESLSIDLTEESLRRAGRGAQNLEDKIKQMKETDAE------KLQNEYAKLV 288
Query: 345 ERRKATLAKREFQHFFS-CWTGDKALRELQEANISR--------QCFPILLECATKAIKE 395
E + RE + F S D L+E NI R + F L+ K +
Sbjct: 289 EGLREADQAREEEAFMSNPALPDDLLKEAIPGNIRRAEHFTAFLKRFIEYLKTRMKVLHV 348
Query: 396 ATDTE-SELPHLSGMSVIT----------LEGLFSSLTY--------------FFSRNGS 430
++T S L HL ++ I L L +L F + +
Sbjct: 349 ISETPPSFLAHLKELTFIEKKPLRFCAERLTSLVRTLELTNIEDYQPLQEVASFATLVAT 408
Query: 431 HVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMN 490
+ + + L L+ Y + P L CL+ A+ K V + S+I+TSGT+SP+
Sbjct: 409 YETGFLLILEPYESDTATVPNPE----LHFTCLDAAIAIKPVFDRFSSVIITSGTISPLE 464
Query: 491 SFSSELGVQFGTCLEAPHVIDVDLQ-VLTSVISTGPDNYPLNASYKTADGYKLMEKLCNR 549
+ LG F T ++ + + + + L +++ G D ++ ++T D +++ N
Sbjct: 465 MYPKMLG--FSTVVQESYAMTLARRSFLPMIVTRGSDQSQMSTGFQTRDDPQVVRNYGNL 522
Query: 550 WRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNND 609
E +S+L + P S E V+ + S G +V + K + E +
Sbjct: 523 LIE---FSKLTPDGIVVFFP---SYLYMERVISSWQ---SMGILDSVWKSKLILVETPDS 573
Query: 610 LNT---IESQENA--NKKGASFLAVCRGKI---------------VVGIPFPNINDIQVS 649
T +E+ A N +GA L V RGK+ +G+PF +
Sbjct: 574 QETSLALETYRTACSNGRGAVLLCVARGKVSEGIDFDHHYGRTVLCIGVPFQYTESRILK 633
Query: 650 LKKKY-NDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERN 708
+ ++ +TYR + N++ A R Q +GR +R + DYG +++ D+RF +
Sbjct: 634 ARLEFLRETYR-----IRENDFLSFDAMRHCAQCLGRVLRGKDDYGIMVMADKRFA--KK 686
Query: 709 RAHISKWLRKSIKQYD---SFDASLEGLKSFFRDVKGWVGKKMFNGLE--NSDNDVDHVS 763
R + KW+ ++ + D S D ++ K F + + ++ G+ + ++ ++H
Sbjct: 687 RTQLPKWISSALLESDSQMSVDQAVASAKKFLKVMSKPFPARLQEGVSTWSYEDLMEHKR 746
Query: 764 SMDQCKEVTKQNTQ 777
M+ KE +N Q
Sbjct: 747 KMESEKEREVRNGQ 760
>gi|328786210|ref|XP_396155.4| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit [Apis mellifera]
Length = 759
Score = 127 bits (320), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 174/798 (21%), Positives = 307/798 (38%), Gaps = 198/798 (24%)
Query: 20 VGGIQVEFPYQ-PYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
V G+ V FPY Y Q +M + LD GHC LLE P+GTGK+++LL +A+
Sbjct: 5 VDGLLVYFPYDYIYPEQYAYMLELKRGLDAK---GHC--LLEMPSGTGKTITLLSLIVAY 59
Query: 79 QQNCKLK-NQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKN 137
L +L S + P+ E V + L + + + P G
Sbjct: 60 MLENPLDVTKLIYCSRTVPEIEKVIEELKKLMDYYEKETDNK--PKIVG----------- 106
Query: 138 VKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEEC 197
+ +SR + I +S ++ ++ R H T YVR++ N D+
Sbjct: 107 --------LVLSSRKNMCIHPEVSREREGK------IVDGRCHSLTASYVRERHNYDDST 152
Query: 198 KLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMAD 257
+ C F + G + G ++ I+DL G+ C Y+ AR
Sbjct: 153 PI--------C-NFYEGFDMEGKEQIMPSG---IYSIDDLKEYGKDRNWCPYFLARFTIL 200
Query: 258 DAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDID-------- 308
AQ+V Y Y+++P I + ++ K +++I DEAHNI+++ D+ SV I+
Sbjct: 201 HAQIVVYSYHYLLDPKIAETVSRELSKSSVVIFDEAHNIDNVCIDSMSVKINRRTLEKSS 260
Query: 309 --------------EDVLLKLQMELEQVCS---------------VNPMIYQPLIEMT-- 337
ED + KL+ E E++ NP++ +++
Sbjct: 261 ANIQLLEKTVAEMREDDVNKLKEEYERLVEGLKDAHVARETDIILANPVLPNEVLQEVVP 320
Query: 338 ------QDLVGWIERRKATLAKR-EFQHFFSCWTGDKALRELQ-EANISRQCFPILLECA 389
+ V +++R L R QH + LR++Q + +I R+ E
Sbjct: 321 GNIRNAEHFVSFLKRFVEYLKTRLRVQHVVQ-ESPAAFLRDVQTKVSIERKPLRFCAERL 379
Query: 390 TKAIKEATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKN 449
++ E+ L+ S I L +T+ + ++ + + ++ + D K
Sbjct: 380 ASLLRTM-----EITDLTDFSPIIL------VTHLATLVSTYTKGFTIIVEPF---DDKT 425
Query: 450 PGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQ------FGTC 503
P L CL+ ++ K + + S+++TSGTLSP++ + L F
Sbjct: 426 PNV-LNPILHFVCLDSSIAMKPIFDRFQSVVITSGTLSPLDMYPKILNFHPVIMSSFTMT 484
Query: 504 LEAPHVIDVDLQVLTSVISTGPDNYPLNASYKT---------------------ADG--- 539
L P +L +++ G D +++ Y+T DG
Sbjct: 485 LARP-------CLLPMIVAKGNDQVAISSKYETREDVAVIRNYGQLLVEFAATVPDGLVC 537
Query: 540 ----YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCA 595
Y ME + W + G +L K LF+E + ++ ++
Sbjct: 538 FFTSYLYMESVVAAWYDQGVVDQLQRHKLLFIETQDSAETSLALI--------------- 582
Query: 596 VVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPF-------------PN 642
N I++ EN +GA L+V RGK+ G+ F P
Sbjct: 583 ---------------NYIKACENG--RGAVLLSVARGKVSEGVDFDHHLGRAVLMFGIPY 625
Query: 643 INDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDER 702
+ LK + Y + + N++ A R Q +GR IR + DYG +I D+R
Sbjct: 626 VYTQSRILKARLE--YLRDQFQIRENDFLTFDAMRHAAQCVGRAIRGKTDYGIMIFADKR 683
Query: 703 FQEERNRAHISKWLRKSI 720
F R+ + KW+++ +
Sbjct: 684 FSRIDKRSKLPKWIQEHL 701
>gi|407928326|gb|EKG21185.1| Xeroderma pigmentosum group D protein [Macrophomina phaseolina MS6]
Length = 788
Score = 127 bits (319), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 179/801 (22%), Positives = 331/801 (41%), Gaps = 136/801 (16%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+++ + V FPY + Y Q +MC + TLD G+C +LE P+GTGK++SLL +
Sbjct: 3 FNIDELPVLFPYPRIYPEQYKYMCDLKRTLDAG---GNC--ILEMPSGTGKTVSLLSLII 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNK 136
A+QQ+ K +L S + + E L + +T Q+
Sbjct: 58 AYQQHQPEKRKLIYCSRTMSEIEKALHELKALMKY---------------RTEQLGYEED 102
Query: 137 NVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE 196
+T SR + + + K AV+ +R T +V++K+ E+
Sbjct: 103 FRGLGLT------SRKNLCLHPSVKREKNG------AVVDARCRSLTAGFVKEKKERGED 150
Query: 197 CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMA 256
L C N+ + H + G V +D++ G+ + C Y+ AR M
Sbjct: 151 VDL--------CIYHDNLDLLEPHNLIPPG----VFTFDDILRYGEDHKQCPYFTARRMM 198
Query: 257 DDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLK- 314
++ Y Y+++P I + ++ K I++ DEAHNI+++ ++ S+D+ ED L K
Sbjct: 199 PFCNVIIYSYHYLLDPKIAERVSKELSKDCIVVFDEAHNIDNVCIESLSIDLTEDSLRKA 258
Query: 315 ------LQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKA 368
L+ ++ ++ + + + L + LV + R+A A+ E + D
Sbjct: 259 TRGAHNLERKITEMKATDA---EKLSNEYKKLVEGL--READQARDEDAFMSNPALPDDL 313
Query: 369 LRELQEANISR--------QCFPILLECATKAIKEATDT-ESELPHLSGMSVITLEGL-- 417
L+E NI R + F L+ K + +T S L HL ++ I + L
Sbjct: 314 LKEAVPGNIRRAEHFVSFLKRFIEYLKTRMKVLHVVAETPPSFLNHLKELTFIERKPLRF 373
Query: 418 ----------------------FSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWT 455
+ F + ++ + + L L+ Y + P +
Sbjct: 374 CAERLTSLVRTLELTNIEDYQPLQEVATFATLVATYETGFLLILEPYEAEGATVPNPIFH 433
Query: 456 HTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQ 515
T CL+ ++ K V E S+I+TSGT+SP++ + L F T ++ + + + +
Sbjct: 434 FT----CLDASIAIKPVFERFSSVIITSGTISPLDMYPKMLN--FSTVVQESYTMTLARK 487
Query: 516 -VLTSVISTGPDNYPLNASYKTADGYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQ 574
L +++ G D +++S+ + +++ RE + +L + P
Sbjct: 488 SFLPMIVTRGSDQAAISSSFGVRNDPNVVKNYGVLLRE---FCKLTPDGIVVFFPSYLYM 544
Query: 575 EDFEIVLKHYYNSISQGSKCAVV----RKKRVKREGNNDLNT---IESQENA--NKKGAS 625
E + ISQ ++ R K + E + T +E+ A N +GA
Sbjct: 545 E----------SVISQWQGMGILDDVWRYKLILVETPDAQETSLALETYRTACNNGRGAV 594
Query: 626 FLAVCRGKIVVGIPFPN-----INDIQVSLKKKYNDTYRSSKNLL------SGNEWYCNQ 674
L V RGK+ GI F + + I V + + ++ L N++
Sbjct: 595 LLCVARGKVSEGIDFDHHYGRTVLCIGVPFQYTESRILKARLEFLRETYHIRENDFLSFD 654
Query: 675 AFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYD---SFDASLE 731
A R Q +GR +R + DYG ++L D+RF+ +R + + KW+ + + D S D +
Sbjct: 655 AMRHAAQCLGRVLRGKDDYGIMVLADKRFRNKRTQ--LPKWIAQHLSDADANMSIDQAAA 712
Query: 732 GLKSFFRDVKGWVGKKMFNGL 752
K F RD+ G ++ G+
Sbjct: 713 MAKKFLRDMSKSYGHQLAEGI 733
>gi|268570308|ref|XP_002648469.1| Hypothetical protein CBG24757 [Caenorhabditis briggsae]
Length = 558
Score = 127 bits (319), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 158/354 (44%), Gaps = 97/354 (27%)
Query: 442 YIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQF 500
YI++DS + +C ++ + + + +++L SGTLSP+ +F+ +G+ F
Sbjct: 17 YIRKDSGK------LVIKYFCFQASISMRMLKMRGVRNVLLASGTLSPIQAFTYNMGLNF 70
Query: 501 GTCLEAPHVIDVDLQVLTSVISTGPDNYPL-------NASYKTADG-------------- 539
G LE H + + VLTS+++ G + N Y + G
Sbjct: 71 GAILENEHALK-QVPVLTSIVTRGKHGGLVGSFQNRKNIEYVSDVGESLIRVMETTPQGV 129
Query: 540 ------YKLMEKLCNRWRETGQ---------WSRLNAKKPLFVEPKGGSQEDFEIVLKHY 584
Y M++L W++T + W ++ K + VEP+ ++E V Y
Sbjct: 130 LVFFSSYSQMDELVEVWKKTKRGASDSPETFWEKMEKTKKIAVEPR--AKEQLAAVRLRY 187
Query: 585 YNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGK----------- 633
+S+ GA+ LAVCRGK
Sbjct: 188 TQGVSEPH------------------------------GAALLAVCRGKVSEGIDFCDAE 217
Query: 634 ----IVVGIPFPNINDIQVSLKKKYNDTYRSSKNLL----SGNEWYCNQAFRALNQAIGR 685
I+VGIP+P I+D +V LKK Y D K+L S +WY +AFRA+NQAIGR
Sbjct: 218 SRAVIIVGIPYPPIHDERVVLKKMYLDDLMGRKDLTNEPQSSRDWYQMEAFRAVNQAIGR 277
Query: 686 CIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFRD 739
+RH+ D+G ++L+D R+ + KWLR +I + DS + +L+ + FF++
Sbjct: 278 VLRHKNDFGTVVLIDTRYASAKPEM-FPKWLRNTISRCDSNNCALKTAR-FFKE 329
>gi|2114484|gb|AAB58296.1| DNA helicase [Mus musculus]
Length = 760
Score = 127 bits (318), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 187/803 (23%), Positives = 313/803 (38%), Gaps = 165/803 (20%)
Query: 20 VGGIQVEFPYQ-PYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
V G+ V FPY Y Q +M + TLD H +LE P+GTGK++SLL +A+
Sbjct: 5 VDGLLVYFPYDYIYPEQFSYMLELKRTLD-----AKGHGVLEMPSGTGKTVSLLALIVAY 59
Query: 79 QQNCKLK-NQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKN 137
Q+ L+ +L S + P+ E V + L F + + +P +++ N
Sbjct: 60 QRAYPLEVTKLIYCSRTVPEIEKVIEELRKLLSFYEQQEGEKLPFLGLALSSR---KNLC 116
Query: 138 VKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEEC 197
+ ++TP F + + H T YVR +
Sbjct: 117 IHPEVTPLRFGKD------------------------VDGKCHSLTASYVRAQYQ----- 147
Query: 198 KLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMAD 257
D +L +F + G G +++++DL +GQ C Y+ AR
Sbjct: 148 ----QDASLPHCRFYEEFDIHGRQMPLPAG---IYNLDDLKALGQRQGWCPYFLARYSIL 200
Query: 258 DAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQ 316
A +V Y Y+++P I + ++ + A+++ DEAHNI+++ D+ SV++ L + Q
Sbjct: 201 HANVVVYSYHYLLDPKIADLVSKELARKAVVVFDEAHNIDNVCIDSMSVNLTRRTLDRCQ 260
Query: 317 MELE----QVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALREL 372
L+ V + Q L + + LV + R+A++A+ H + D+ L+E
Sbjct: 261 SNLDTLQKTVLRIKETDEQRLRDEYRRLVEGL--REASVARETDAHLANPVLPDEVLQEA 318
Query: 373 QEANI-SRQCFPILLECATKAIK-----EATDTESELPHLSGMS---------------- 410
+I + + F L + +K + ES LSG++
Sbjct: 319 VPGSIRTAEHFLGFLRRLLEYVKWRLRVQHVVQESPPAFLSGLAQRVCIQRKPLRFCAER 378
Query: 411 ----VITLE----GLFSSLTYFFSRNGSHVSDYQLALQKYIK-RDSKNPGGNWTHTLSLW 461
+ TLE FS LT + + VS Y I+ D + P L
Sbjct: 379 LRSLLHTLEIADLADFSPLT-LLANFATLVSTYAKGFTIIIEPFDDRTPTIA-NPVLHFS 436
Query: 462 CLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELG---VQFGT--------CLEAPHVI 510
C++ ++ K V E S+I+TSGTLSP++ + L V T CL P +I
Sbjct: 437 CMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMATFTMTLARVCL-CPMII 495
Query: 511 DV--DLQVLTSVISTGPD--------NYPLNASYKTADG-------YKLMEKLCNRWRET 553
D ++S T D N L S DG Y+ ME W E
Sbjct: 496 GRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFTSYQYMESTVASWYEQ 555
Query: 554 GQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTI 613
G + K LF+E + G++ + L+ Y + G
Sbjct: 556 GILENIQRNKLLFIETQDGAETS--VALEKYQEACENG---------------------- 591
Query: 614 ESQENANKKGASFLAVCRGKIVVGIPF-------------PNINDIQVSLKKKYNDTYRS 660
+GA L+V RGK+ GI F P + LK + Y
Sbjct: 592 --------RGAVLLSVARGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLE--YLR 641
Query: 661 SKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSI 720
+ + N++ A R Q +GR IR + DYG ++ D+RF R + +W+++ +
Sbjct: 642 DQFQIRENDFLTFDAMRHAAQCVGRAIRGKTDYGLMVFADKRFARADKRGKLPRWIQEHL 701
Query: 721 KQYD---SFDASLEGLKSFFRDV 740
+ + D ++ K F R +
Sbjct: 702 TDSNLNLTVDEGVQVAKYFLRQM 724
>gi|344233991|gb|EGV65861.1| hypothetical protein CANTEDRAFT_101726 [Candida tenuis ATCC 10573]
Length = 807
Score = 127 bits (318), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 163/658 (24%), Positives = 275/658 (41%), Gaps = 110/658 (16%)
Query: 146 IFYASRTHSQISQVISEYKKTAY---------RVPMAVLASRKHYCTNKYVR---DKENI 193
IF++SRTH+Q+ Q + T + RV + SRK C + + + E+I
Sbjct: 185 IFFSSRTHTQLGQFSGQLALTTFESSLYDMSERVKYLPMGSRKQLCIHPKISKLSNTESI 244
Query: 194 DEECKLLLGDRNLGCPQFKNVHKVRG-HPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAA 252
+E C L + C +F KV G ++HDI++L +G+ ++ C YY+
Sbjct: 245 NEACGEL-AKKESKC-EFVCNTKVEGIKQQFNDYSLTKIHDIQELKQLGEYLKICPYYSV 302
Query: 253 RSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVL 312
R+ +++ PY ++ R ++ ++IK +I+I+DEAHN+ D S I + L
Sbjct: 303 RNNLKMTEVISLPYQMLLEENARDSLNINIKNSIIIVDEAHNLLDTINALNSAAISAEEL 362
Query: 313 LKLQMELEQ-----VCSVNP---MIYQPLIEMTQDLVGWI-----ERRKATLAKREFQHF 359
L L+ + +NP + LI++ L +I + T K +
Sbjct: 363 TSLNQSLKLYFNKFIKRLNPGNRINIMKLIKICSILHKFIVYNRDNKLAKTGGKIKINDI 422
Query: 360 FSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVITLEGLFS 419
F TGD L + + N + I + T K + ++ L V L L +
Sbjct: 423 FIDNTGD--LFNIHKLNEYLKTSKIAFKIETYLEKNVENYQTTSNPLLFKLVTFLRALSN 480
Query: 420 SLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSI 479
+ GS DS +P ++ L+P+ +FK + E +
Sbjct: 481 P-----TNEGSFF------------WDSTSPDD---LSIKYLLLDPSEIFKPIVEDCKCL 520
Query: 480 ILTSGTLSPMNSFSSELGVQFGTC----LEAPHVIDVD-LQVLTSVISTGPDNYPLNASY 534
IL GT+ PM+ ++ L T H+I ++ L+VL N L+ S+
Sbjct: 521 ILAGGTMEPMSDYTEYLFPYLPTTQIKQFSCDHIIPIENLKVLPI---GSYKNQILDFSF 577
Query: 535 K---------------------TADG-------YKLMEKLCNRWRETGQWSRLNA-KKPL 565
K T DG YK + + W++ G W ++ A K L
Sbjct: 578 KNRNNSTLILRLGECLIEIMKNTPDGTVVFLPSYKYLNHIVAEWKQMGIWKQMEALKSSL 637
Query: 566 FVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGAS 625
FVEP SQ D VLK Y +I G K AV+ + + + + +
Sbjct: 638 FVEPSSSSQVD--EVLKKYSRAIKTG-KGAVL------------FSVVGGKLSEGINFSD 682
Query: 626 FLAVCRGKIVVGIPFPNINDIQVSLKKKYND------TYRSSKNLLSGNEWYCNQAFRAL 679
LA R I+VG+P+PN+ ++ +KK+ + T S L + ++ N R++
Sbjct: 683 ELA--RAVIMVGLPYPNLMSGELIARKKFIEETTFLKTGSKSMALDNSRQFIENICMRSI 740
Query: 680 NQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFF 737
NQ+IGR IRH DY I L D R+ ++ + +S W+++ I F ++ FF
Sbjct: 741 NQSIGRSIRHINDYSMIYLFDHRYHQKSVQNKLSGWIKRRILDQLPFPEVIQHTNDFF 798
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 50/84 (59%), Gaps = 7/84 (8%)
Query: 21 GGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQ 80
G + PY+PY QL M + +D+ + G L ESPTGTGK+LSL+C+T++W +
Sbjct: 4 GDDKFHHPYEPYDIQLQLMGEIYEAIDKGFKVG----LFESPTGTGKTLSLICATMSWLR 59
Query: 81 NCKLKNQLANISHSKPDTEAVTDP 104
K KN SHS D+E+ ++P
Sbjct: 60 --KHKNTNLTTSHSG-DSESESEP 80
>gi|303289152|ref|XP_003063864.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454932|gb|EEH52237.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 256
Score = 127 bits (318), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 127/288 (44%), Gaps = 74/288 (25%)
Query: 491 SFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTG--------PDNYPLNAS------YKT 536
S SELGV+F +EAPH++ + + + G D P N K
Sbjct: 1 SLESELGVEFPVKVEAPHIVPRRQLHVEASDALGDFTRKTQESDKMPGNLGSLLLKYVKV 60
Query: 537 ADG--------YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSI 588
G Y L++++ + W TG L K + E G E ++ + ++I
Sbjct: 61 TPGGVLVFLPKYSLIQRVIDEWAHTGMLEELEKHKRVVYEEPGA--ETLAPTMETFKDAI 118
Query: 589 SQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKI-------------- 634
G +G FLAV RGK+
Sbjct: 119 ESG------------------------------RGGVFLAVYRGKVSEGLDFKDANARAV 148
Query: 635 -VVGIPFPNINDIQVSLKKKYNDTYRSSK-NLLSGNEWYCNQAFRALNQAIGRCIRHRFD 692
VGIPFP++ D++V LK++YN+ S K L+SG EWY +QAFRA NQA+GRC+RH+FD
Sbjct: 149 FCVGIPFPSLGDVKVKLKREYNNHVESKKQGLMSGGEWYTHQAFRAYNQALGRCVRHQFD 208
Query: 693 YGAIILLDERF----QEERNRAHISKWLRKSIKQYDSFDASLEGLKSF 736
Y I L+D RF + N+ +SKW+R + Y S+ ++ F
Sbjct: 209 YACIFLVDARFCMHDEASHNKRMVSKWMRNLVTHYSQSRESVGTVREF 256
>gi|31542614|ref|NP_031975.2| TFIIH basal transcription factor complex helicase XPD subunit [Mus
musculus]
gi|341940664|sp|O08811.2|ERCC2_MOUSE RecName: Full=TFIIH basal transcription factor complex helicase XPD
subunit; AltName: Full=CXPD; AltName: Full=DNA excision
repair protein ERCC-2; AltName: Full=DNA repair protein
complementing XP-D cells; AltName: Full=Xeroderma
pigmentosum group D-complementing protein
gi|26349935|dbj|BAC38607.1| unnamed protein product [Mus musculus]
gi|148691193|gb|EDL23140.1| excision repair cross-complementing rodent repair deficiency,
complementation group 2 [Mus musculus]
Length = 760
Score = 126 bits (317), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 187/803 (23%), Positives = 313/803 (38%), Gaps = 165/803 (20%)
Query: 20 VGGIQVEFPYQ-PYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
V G+ V FPY Y Q +M + TLD H +LE P+GTGK++SLL +A+
Sbjct: 5 VDGLLVYFPYDYIYPEQFSYMLELKRTLD-----AKGHGVLEMPSGTGKTVSLLALIVAY 59
Query: 79 QQNCKLK-NQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKN 137
Q+ L+ +L S + P+ E V + L F + + +P +++ N
Sbjct: 60 QRAYPLEVTKLIYCSRTVPEIEKVIEELRKLLSFYEQQEGEKLPFLGLALSSR---KNLC 116
Query: 138 VKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEEC 197
+ ++TP F + + H T YVR +
Sbjct: 117 IHPEVTPLRFGKD------------------------VDGKCHSLTASYVRAQYQ----- 147
Query: 198 KLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMAD 257
D +L +F + G G +++++DL +GQ C Y+ AR
Sbjct: 148 ----QDASLPHCRFYEEFDIHGRQMPLPAG---IYNLDDLKALGQRQGWCPYFLARYSIL 200
Query: 258 DAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQ 316
A +V Y Y+++P I + ++ + A+++ DEAHNI+++ D+ SV++ L + Q
Sbjct: 201 HANVVVYSYHYLLDPKIADLVSKELARKAVVVFDEAHNIDNVCIDSMSVNLTRRTLDRCQ 260
Query: 317 MELE----QVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALREL 372
L+ V + Q L + + LV + R+A++A+ H + D+ L+E
Sbjct: 261 SNLDTLQKTVLRIKETDEQRLRDEYRRLVEGL--REASVARETDAHLANPVLPDEVLQEA 318
Query: 373 QEANI-SRQCFPILLECATKAIK-----EATDTESELPHLSGMS---------------- 410
+I + + F L + +K + ES LSG++
Sbjct: 319 VPGSIRTAEHFLGFLRRLLEYVKWRLRVQHVVQESPPAFLSGLAQRVCIQRKPLRFCAER 378
Query: 411 ----VITLE----GLFSSLTYFFSRNGSHVSDYQLALQKYIK-RDSKNPGGNWTHTLSLW 461
+ TLE FS LT + + VS Y I+ D + P L
Sbjct: 379 LRSLLHTLEIADLADFSPLT-LLANFATLVSTYAKGFTIIIEPFDDRTPTIA-NPVLHFS 436
Query: 462 CLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELG---VQFGT--------CLEAPHVI 510
C++ ++ K V E S+I+TSGTLSP++ + L V T CL P +I
Sbjct: 437 CMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMATFTMTLARVCL-CPMII 495
Query: 511 DV--DLQVLTSVISTGPD--------NYPLNASYKTADG-------YKLMEKLCNRWRET 553
D ++S T D N L S DG Y+ ME W E
Sbjct: 496 GRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFTSYQYMESTVASWYEQ 555
Query: 554 GQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTI 613
G + K LF+E + G++ + L+ Y + G
Sbjct: 556 GILENIQRNKLLFIETQDGAETS--VALEKYQEACENG---------------------- 591
Query: 614 ESQENANKKGASFLAVCRGKIVVGIPF-------------PNINDIQVSLKKKYNDTYRS 660
+GA L+V RGK+ GI F P + LK + Y
Sbjct: 592 --------RGAILLSVARGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLE--YLR 641
Query: 661 SKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSI 720
+ + N++ A R Q +GR IR + DYG ++ D+RF R + +W+++ +
Sbjct: 642 DQFQIRENDFLTFDAMRHAAQCVGRAIRGKTDYGLMVFADKRFARADKRGKLPRWIQEHL 701
Query: 721 KQYD---SFDASLEGLKSFFRDV 740
+ + D ++ K F R +
Sbjct: 702 TDSNLNLTVDEGVQVAKYFLRQM 724
>gi|299470611|emb|CBN80233.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 932
Score = 126 bits (316), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 122/480 (25%), Positives = 202/480 (42%), Gaps = 89/480 (18%)
Query: 254 SMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLL 313
++A AQ+V PY+YI++P +R AM + ++GA++ILDEAHN+E + RDAGS+++ ++
Sbjct: 2 ALAKQAQIVLMPYNYILDPSVRSAMSLALEGAVVILDEAHNVEGVCRDAGSLEVSLLDMV 61
Query: 314 KLQMEL-----EQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKA 368
+ +L CS+ + L++ L+ + + TL E + F
Sbjct: 62 AMASDLCDCSQLTACSLGANL---LLKFVMKLLYFTSKESRTLEAFENETDFE--EPPPG 116
Query: 369 LRELQEANISRQCFPILL------ECATKAIKEATDTESELPHLSGMSVITLEGLFSSLT 422
R+ ++ + P LL + A A E S S++ + L ++L
Sbjct: 117 ARKKKQQEVINTAVPALLKKHWACDSAGSMFWAAFVGPEEDASTSHASLLRIPAL-NNLE 175
Query: 423 YFFSRNG---SHVSDYQLALQKY--------------IKRDSKNPGGNWTHT-------- 457
F G H DY + + + R + P GN +
Sbjct: 176 RFLFVTGLGLHHPHDYGVNVMSWDNVEKHKLPVHTRTSTRHASCPLGNSPFSRSSYVPAK 235
Query: 458 ---LSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFG--------TCLEA 506
L++W ++P+VVF +V + S+ILTSGTLSP++S +ELG FG LEA
Sbjct: 236 MCRLNIWLMSPSVVFDEVPAQTHSVILTSGTLSPLHSLRAELGRSFGERLLPFPQQALEA 295
Query: 507 PHVIDVDLQVLTSVISTGPDNYPLNASYKTAD---------------------------- 538
HVI+ + Q+ + P N L D
Sbjct: 296 NHVINPERQLRVIPVGHSPRNKTLMCKKVCTDNDEFVEEIGRTVVALAKHIPAGVLVFLS 355
Query: 539 GYKLMEKLCNRWRETGQWSRLNAKKPLFV-EPKGGSQEDFEIVLKHYYNSISQGSKCAVV 597
YKL+++ WR+ W+ L K + V EP+ + DF+ + Y +++ G
Sbjct: 356 SYKLLQRAVAIWRKCEVWADLERIKGVIVEEPEAAA--DFKAAKRRYEDAVDGGPGGRGR 413
Query: 598 RKKRVKREGNNDLNTIESQENANKKGASF-LAVCRGKIVVGIPFPNINDIQVSLKKKYND 656
+ + +G SF RG + VGIP+PN+ D ++ KK YND
Sbjct: 414 GRGSAG----GSAILLAVYRGKMSEGISFNDHYARGVLCVGIPYPNLGDPKIVAKKCYND 469
Score = 83.6 bits (205), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 54/85 (63%), Gaps = 2/85 (2%)
Query: 662 KNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQ--EERNRAHISKWLRKS 719
K LLSG+ WY +A+RA NQA+GRCIRH +DYG + L+DER + E ++ ++KW+R
Sbjct: 654 KALLSGSNWYAQEAYRAQNQALGRCIRHVYDYGVVCLIDERIRAGEWKHVKFLAKWMRDL 713
Query: 720 IKQYDSFDASLEGLKSFFRDVKGWV 744
Y SF+ + + FF G+V
Sbjct: 714 RGDYPSFEHVVGTMDQFFASAPGFV 738
>gi|345480734|ref|XP_001605333.2| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit-like [Nasonia vitripennis]
Length = 759
Score = 126 bits (316), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 172/797 (21%), Positives = 311/797 (39%), Gaps = 196/797 (24%)
Query: 20 VGGIQVEFPYQ-PYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
V G+ V FPY Y Q +M + LD GHC LLE P+GTGK+++LL +A+
Sbjct: 5 VDGLLVYFPYDYIYPEQYAYMLDLKRGLDAK---GHC--LLEMPSGTGKTITLLSLIVAY 59
Query: 79 Q-QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKN 137
++ +L S + P+ E V + L + + + + P G
Sbjct: 60 MLEHPHQVTKLIYCSRTVPEIEKVIEELKKLIDYY--EKETKVLPKIIG----------- 106
Query: 138 VKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEEC 197
+ +SR + I +S+ ++ ++ S+ H T YVR++ N DE
Sbjct: 107 --------LVLSSRKNMCIHPEVSKEREGK------IVDSQCHALTASYVRERHNYDEST 152
Query: 198 KLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMAD 257
+ C F + G + G ++ I+D+ G+ C Y+ AR
Sbjct: 153 PV--------C-GFYETFDIEGREMMMPPG---IYSIDDMKEYGKDRNWCPYFLARYTIM 200
Query: 258 DAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSV----------- 305
AQ++ Y Y+++P I A+ ++ K ++++ DEAHNI+++ D+ SV
Sbjct: 201 HAQIIVYSYHYLLDPKIAEAVSKELAKSSVVVFDEAHNIDNVCIDSMSVKLNRRTMEKSC 260
Query: 306 -----------DIDEDVLLKLQMELEQ---------------VCSVNPMIYQPLIE---- 335
++ ED KL+ E + V NP++ ++E
Sbjct: 261 ANLSLLEKTVAEMKEDDANKLKDEYNKLVEGLKDAQVARETDVVLANPVLPNEVLEDVVP 320
Query: 336 ----MTQDLVGWIERRKATLAKR-EFQHFFSCWTGDKALRELQEANISRQCFPILLECAT 390
+ VG+++R L R QH T LR++Q A I + P+ CA
Sbjct: 321 GNIRKAEHFVGFLKRFVEYLKMRLRIQHVVQ-ETPVTFLRDVQ-AKICIERKPLRF-CAE 377
Query: 391 KAIKEATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNP 450
+ + E+ L+ S + L +T+ + ++ + + ++ + D K P
Sbjct: 378 RL--ASLLRTMEITDLTDFSPLIL------VTHLATLVATYTKGFTIIIEPF---DDKAP 426
Query: 451 GGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQ------FGTCL 504
+ L CL+ ++ K + + S+++TSGTLSP++ + L F L
Sbjct: 427 TVH-NPILYFSCLDSSIAMKPIFDRFQSVVITSGTLSPLDMYPKILNFHPVIMSSFTMTL 485
Query: 505 EAPHVIDVDLQVLTSVISTGPDNYPLNASYKT---------------------ADG---- 539
P +L ++S G D +++ Y+T DG
Sbjct: 486 ARPC-------LLPMIVSKGNDQVAISSKYETREDVAVIRNYGQLLVEFAANVPDGIVCF 538
Query: 540 ---YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAV 596
Y ME + W + G ++ K +F+E + ++ + +YYN
Sbjct: 539 FTSYLYMESVVAAWYDQGILDQIQRYKLIFIETQDAAETSLAL---YYYNKACD------ 589
Query: 597 VRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPF-------------PNI 643
N +GA L+V RGK+ G+ F P +
Sbjct: 590 -----------------------NGRGAVLLSVARGKVSEGVDFDHHLGRAVLMFGIPYV 626
Query: 644 NDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERF 703
LK + Y + + N++ A R Q +GR IR + DYG ++ D+RF
Sbjct: 627 YTQSRILKARLE--YLRDQFQIKENDFLTFDAMRHAAQCVGRAIRGKTDYGIMVFADKRF 684
Query: 704 QEERNRAHISKWLRKSI 720
++ + KW+++ +
Sbjct: 685 SRIDKKSKLPKWIQEYL 701
>gi|159118615|ref|XP_001709526.1| TFIIH basal transcription factor complex helicase subunit [Giardia
lamblia ATCC 50803]
gi|157437643|gb|EDO81852.1| TFIIH basal transcription factor complex helicase subunit [Giardia
lamblia ATCC 50803]
Length = 1059
Score = 126 bits (316), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 159/357 (44%), Gaps = 58/357 (16%)
Query: 460 LWCLNPAVVFKDV--AELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVI---DVDL 514
L C+ P + K + E S++LTSGTL+P ++ +ELG+ FG + PH++ +
Sbjct: 612 LLCMTPKSILKTIVLGESVHSLVLTSGTLAPFSALQAELGLSFGISVSCPHIVPPSNYLF 671
Query: 515 QVLTSVIST---------------GPDNYPLNASYKTADG--------YKLMEKLCNRWR 551
+ +T++ T Y L A + G YK M ++ + W+
Sbjct: 672 RAITAITGTPLLGIYKNRESKSYQKQLGYALQACVRGVVGGTLVFFPSYKYMAQVLDSWK 731
Query: 552 ETGQWSRLNAK-----KPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREG 606
G + L + + LFVEP Q+D V+K Y +S G + R K
Sbjct: 732 ADGTEAELKSSTHGDPRDLFVEPL--RQQDCNAVIKKYRDSCDAGRSPILFVICRGKLAE 789
Query: 607 NNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLS 666
D + CR +V+ +P+PNI+D + K + D + ++L
Sbjct: 790 GIDFSN---------------NYCRCALVISLPYPNISDPLLKAKMDWLDKH----SVLK 830
Query: 667 GNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSF 726
G +WY A+R++NQA+GR +RH+ DYG + LLD+R+ E +R +S WL + +
Sbjct: 831 GGDWYSVHAYRSVNQALGRVLRHKDDYGCMFLLDQRYSIEISRKQLSGWLADQLVSTELA 890
Query: 727 DASLEGLKSFFRDVKGWVGKKMFNGLENS---DNDVDHVSSMDQCKEVTKQNTQELN 780
++ K F + + + K+ + S N D +S+ + +E + EL
Sbjct: 891 GTGVQTEK-IFAETRAFYSKRTLSSSPESAKGSNPFDRMSTTRKLEEPIFKTKDELG 946
Score = 119 bits (299), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 97/353 (27%), Positives = 161/353 (45%), Gaps = 59/353 (16%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ G+ +FP++PY SQ+ +M +I+ L++ + +ALLESPTGTGK+LSLL +A+Q
Sbjct: 7 IKGVHFQFPFEPYPSQIEYMSSLITALNKKE-----NALLESPTGTGKTLSLLIPAIAYQ 61
Query: 80 QNCKLKNQLANISHSKPDTEAV-TDPLANGGGFIPESQPSTIPPST-------------- 124
+ C L K A+ +P G + S P +PP
Sbjct: 62 EQCISFLSLVTSLLKKCKAGAIIAEP--TGAPTLSSSAP-LMPPDVGKLLEWTDQTLDFR 118
Query: 125 -----NGQTAQVAMNN--KNVKKKMTPTIFYASRTHSQISQVISEYKK------------ 165
+ + + +N+ + V ++ P I YA+RTH+QI Q I + KK
Sbjct: 119 DSVIIDSKLKNIRLNDTARWVAERPPPKILYAARTHAQIEQAIRQLKKHVTISDASGDSR 178
Query: 166 TAYRVPMAVLASRKHYCTNKYVRDKE-----NIDEECKLLLGDRNLGCPQFKN------- 213
+ P+A+L SR+ +C N+ + CK L DR C + +
Sbjct: 179 SFLLWPIAMLGSRRIFCINERAHTYAAAANITLGMACKKLCDDRQ--CRYYSSDGDSDDL 236
Query: 214 VHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPV 273
K R + G + D+ED + + C YY R++ A++V PY+YI++
Sbjct: 237 AQKYREYYCENSNG--RLDDLEDFLGYCKNESRCPYYLGRALVPQARVVTAPYNYILSSK 294
Query: 274 IRGA-MEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQVCSV 325
R + + ++ +IL++DE HNI D S + D LLK E++ + V
Sbjct: 295 NRTSELSSMLRNSILLVDEGHNIGQACCDTFSGSVTTDALLKASEEIQYLQKV 347
>gi|332026203|gb|EGI66345.1| TFIIH basal transcription factor complex helicase subunit
[Acromyrmex echinatior]
Length = 774
Score = 126 bits (316), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 180/800 (22%), Positives = 311/800 (38%), Gaps = 202/800 (25%)
Query: 20 VGGIQVEFPYQ-PYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
V G+ V FPY Y Q +M + LD GHC LLE P+GTGK+++LL +A+
Sbjct: 20 VDGLIVYFPYDYIYPEQYAYMLELKRGLDA---KGHC--LLEMPSGTGKTITLLSLIVAY 74
Query: 79 QQNCKLK-NQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKN 137
L +L S + P+ E V + L + + S P G
Sbjct: 75 MLEHPLDVTKLIYCSRTVPEIEKVIEELKKLIDYYEKETKSK--PKIVG----------- 121
Query: 138 VKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEEC 197
+ +SR + I +S ++ ++ R H T YVR++ N DE
Sbjct: 122 --------LVLSSRKNMCIHPEVSREREGK------IVDGRCHSLTASYVRERHNYDEST 167
Query: 198 KLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMAD 257
+ C F + G + G ++ I+DL G+ C Y+ AR
Sbjct: 168 PI--------C-NFYEGFDMEGREQIMPPG---IYSIDDLKEYGKDRNWCPYFLARFTIL 215
Query: 258 DAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDID-------- 308
AQ+V Y Y+++P I + ++ + +++I DEAHNI+++ D+ SV I+
Sbjct: 216 HAQIVVYSYHYLLDPKIAETVSKELSRSSVVIFDEAHNIDNVCIDSMSVKINRKTMEKST 275
Query: 309 ---------------EDVLLKLQMELEQ---------------VCSVNPMIYQPLIEMT- 337
EDV KL+ E E+ V NP++ ++E
Sbjct: 276 ANIQLLEKTVAEMRQEDV-NKLKEEYERLVEGLRDAQFQRETDVILANPILPNEILEEVI 334
Query: 338 -------QDLVGWIERRKATLAKR-EFQHFFSCWTGDKALRELQEANISRQCFPILLECA 389
+ V +++R L R QH + L+++Q A ++ + P+ CA
Sbjct: 335 PGNIRNAEHFVSFLKRFVEYLKTRLRVQHVVQ-ESPAAFLKDIQ-AKVAIERKPLRF-CA 391
Query: 390 TKAIKEATDTE-SELPHLSGMSVIT-LEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDS 447
+ E ++L S + ++T L L S+ T+ F+ + ++ + D
Sbjct: 392 QRLASLLRTMEITDLTDFSPIILVTHLATLVSTYTHGFT----------IIVEPF---DD 438
Query: 448 KNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQ------FG 501
K P L CL+ ++ K + + S+++TSGTLSP++ + L F
Sbjct: 439 KTPTV-LNPILHFSCLDSSIAIKPIFDRFQSVVITSGTLSPLDMYPKVLNFHPVIMSSFT 497
Query: 502 TCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKT---------------------ADG- 539
L P +L +++ G D +++ Y+T DG
Sbjct: 498 MTLARP-------CLLPMIVAKGNDQVAISSKYETREDVAVIRNYGQLLVEFAATVPDGL 550
Query: 540 ------YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSK 593
Y ME + W + G +L K LF+E + ++ ++
Sbjct: 551 VCFFTSYLYMESVVAAWYDQGVVDQLQRHKLLFIETQDSAETSLALI------------- 597
Query: 594 CAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPF------------- 640
N I++ EN +GA L+V RGK+ G+ F
Sbjct: 598 -----------------NYIKACENG--RGAVLLSVARGKVSEGVDFDHHLGRAVLMFGI 638
Query: 641 PNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLD 700
P + LK + Y + + N++ A R Q +GR IR + DYG ++ D
Sbjct: 639 PYVYTQSRILKARLE--YLRDQFQIRENDFLTFDAMRHAAQCVGRAIRGKTDYGIMVFAD 696
Query: 701 ERFQEERNRAHISKWLRKSI 720
+RF R+ + KW+++ +
Sbjct: 697 KRFSRIDKRSKLPKWIQEHL 716
>gi|307182232|gb|EFN69563.1| TFIIH basal transcription factor complex helicase subunit
[Camponotus floridanus]
Length = 759
Score = 125 bits (315), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 178/800 (22%), Positives = 310/800 (38%), Gaps = 202/800 (25%)
Query: 20 VGGIQVEFPYQ-PYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
V G+ V FPY Y Q +M + LD GHC LLE P+GTGK+++LL +A+
Sbjct: 5 VDGLIVYFPYDYIYPEQYAYMLELKRGLDAK---GHC--LLEMPSGTGKTITLLSLIVAY 59
Query: 79 QQNCKLK-NQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKN 137
L +L S + P+ E V + L + + S P G
Sbjct: 60 MLEHPLDVTKLIYCSRTVPEIEKVIEELKKLIDYYEKETKSK--PKIVG----------- 106
Query: 138 VKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEEC 197
+ +SR + I +S ++ ++ R H T YVR++ N DE
Sbjct: 107 --------LVLSSRKNMCIHPEVSREREGK------IVDGRCHSLTASYVRERHNYDEST 152
Query: 198 KLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMAD 257
+ C F + G + G ++ I+DL + G+ C Y+ AR
Sbjct: 153 PI--------C-SFYEGFDMEGREQIIPPG---IYSIDDLKDYGKDRNWCPYFLARFTIL 200
Query: 258 DAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLK-- 314
AQ+V Y Y+++P I + ++ K ++++ DEAHNI+++ D+ SV I+ ++ K
Sbjct: 201 HAQIVVYSYHYLLDPKIAETVSKELSKNSVVVFDEAHNIDNVCIDSMSVKINRKLMEKSS 260
Query: 315 ------------------------------------LQMELEQVCSVNPMIYQPLIEMT- 337
LQ E + + + NP++ ++E
Sbjct: 261 TNIQLLEKTVAEMREVDVNKLKEEYNRLVEGLKDAQLQRETDVILA-NPILPNEVLEEVV 319
Query: 338 -------QDLVGWIERRKATLAKR-EFQHFFSCWTGDKALRELQEANISRQCFPILLECA 389
+ V +++R L R QH + LR++Q A ++ + P+ CA
Sbjct: 320 PGNIRNAEHFVSFLKRFVEYLKTRLRVQHVVQ-ESPAAFLRDIQ-AKVAIERKPLRF-CA 376
Query: 390 TKAIKEATDTE-SELPHLSGMSVIT-LEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDS 447
+ E ++L S + ++T L L S+ T+ F+ + ++ + D
Sbjct: 377 QRLASLLRTMEITDLTDFSPIILVTHLATLVSTYTHGFT----------IIVEPF---DD 423
Query: 448 KNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQ------FG 501
K P L CL+ ++ K + + S+I+TSGTLSP++ + L F
Sbjct: 424 KTPTV-LNPILHFSCLDSSIAVKPIFDRFQSVIITSGTLSPLDMYPKILNFHPVIMSSFT 482
Query: 502 TCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKT---------------------ADG- 539
L P +L ++ G D +++ Y+T DG
Sbjct: 483 MTLARP-------CLLPMIVGKGNDQVTISSKYETREDVAVIRNYGQLLVEFAATVPDGL 535
Query: 540 ------YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSK 593
Y ME + W + G +L K LF+E + ++ ++
Sbjct: 536 VCFFTSYLYMESVVAAWYDQGVVDQLQRHKLLFIETQDSAETSLALI------------- 582
Query: 594 CAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPF------------- 640
N I++ EN +GA L+V RGK+ G+ F
Sbjct: 583 -----------------NYIKACENG--RGAVLLSVARGKVSEGVDFDHHLGRAVLMFGI 623
Query: 641 PNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLD 700
P + LK + Y + + N++ A R Q +GR IR + DYG ++ D
Sbjct: 624 PYVYTQSRILKARLE--YLRDQFQIRENDFLTFDAMRHAAQCVGRAIRGKTDYGIMVFAD 681
Query: 701 ERFQEERNRAHISKWLRKSI 720
+RF R+ + KW+++ +
Sbjct: 682 KRFSRIDKRSKLPKWIQEHL 701
>gi|146741362|dbj|BAF62336.1| DNA-repair protein complementing XP-D cells [Sus scrofa]
Length = 756
Score = 125 bits (315), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 188/803 (23%), Positives = 313/803 (38%), Gaps = 165/803 (20%)
Query: 20 VGGIQVEFPYQ-PYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
V G+ V FPY Y Q +M + TLD H +LE P+GTGK++SLL +A+
Sbjct: 1 VDGLLVYFPYDYIYPEQFSYMLELKRTLD-----AKGHGVLEMPSGTGKTVSLLALIMAY 55
Query: 79 QQNCKLK-NQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKN 137
Q+ L+ +L S + P+ E V + L F + + +P +++ N
Sbjct: 56 QRAYPLEVTKLIYCSRTVPEIEKVIEELRKLLSFYEKQEGEKLPFLGLALSSR---KNLC 112
Query: 138 VKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEEC 197
+ ++TP F + + H T YVR +
Sbjct: 113 IHPEVTPLRFGKD------------------------VDGKCHSLTASYVRAQYQ----- 143
Query: 198 KLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMAD 257
D +L +F V G G +++++DL +G+ C Y+ AR
Sbjct: 144 ----QDPSLPHCRFYEEFDVHGRQVPLPAG---IYNLDDLKALGRRQGWCPYFLARYSIL 196
Query: 258 DAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQ 316
A +V Y Y+++P I + ++ + A+++ DEAHNI+++ D+ SV++ +L + Q
Sbjct: 197 HANVVVYSYHYLLDPKIADLVSKELARKAVVVFDEAHNIDNVCIDSMSVNLTRRMLDRCQ 256
Query: 317 MELE----QVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALREL 372
LE V + Q L + + LV + R+A+ A+ H + D+ L+E
Sbjct: 257 GNLETLQKTVLRIKETDEQRLRDEYRRLVEGL--REASAARETDAHLANPVLPDEVLQEA 314
Query: 373 QEANI-SRQCFPILLECATKAIK-----EATDTESELPHLSGMS---------------- 410
+I + + F L + +K + ES LSG++
Sbjct: 315 VPGSIRTAEHFLGFLRRLLEYVKWRLRVQHVVQESPPAFLSGLAQRVCIQRKPLRFCAER 374
Query: 411 ----VITLE----GLFSSLTYFFSRNGSHVSDYQLALQKYIK-RDSKNPGGNWTHTLSLW 461
+ TLE FS LT + + VS Y I+ D + P L
Sbjct: 375 LRSLLHTLEIADLADFSPLT-LLANFATLVSTYAKGFTIIIEPFDDRTPTIA-NPVLHFS 432
Query: 462 CLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELG---VQFGT--------CLEAPHVI 510
C++ ++ K V E S+I+TSGTLSP++ + L V T CL P +I
Sbjct: 433 CMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMATFTMTLARVCL-CPMII 491
Query: 511 DV--DLQVLTSVISTGPD--------NYPLNASYKTADG-------YKLMEKLCNRWRET 553
D ++S T D N L S DG Y+ ME W E
Sbjct: 492 GRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFTSYQYMESTVAAWYEQ 551
Query: 554 GQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTI 613
G + K LF+E + G++ + L+ Y + G
Sbjct: 552 GILENIQRNKLLFIETQDGAETS--VALEKYQEACENG---------------------- 587
Query: 614 ESQENANKKGASFLAVCRGKIVVGIPF-------------PNINDIQVSLKKKYNDTYRS 660
+GA L+V RGK+ GI F P + LK + Y
Sbjct: 588 --------RGAILLSVARGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLE--YLR 637
Query: 661 SKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSI 720
+ + N++ A R Q +GR IR + DYG ++ D+RF R + +W+++ +
Sbjct: 638 DQFQIRENDFLTFDAMRHAAQCVGRAIRGKTDYGLMVFADKRFARADKRGKLPRWIQEHL 697
Query: 721 KQYD---SFDASLEGLKSFFRDV 740
+ + D ++ K F R +
Sbjct: 698 TDANLNLTVDEGVQVAKYFLRQM 720
>gi|255941534|ref|XP_002561536.1| Pc16g12370 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211586159|emb|CAP93907.1| Pc16g12370 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 795
Score = 125 bits (315), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 179/800 (22%), Positives = 322/800 (40%), Gaps = 162/800 (20%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+ + + V FPY + Y Q +MC + TLD GHC +LE P+GTGK++SLL +
Sbjct: 3 FFIDDLPVLFPYPRIYPEQYAYMCDLKKTLDVG---GHC--VLEMPSGTGKTVSLLSLIV 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNK 136
A+QQ+ +L S + + E L + E + + G +
Sbjct: 58 AYQQHYPEHRKLIYCSRTMSEIEKALAELKA----LMEHRAKEL-----GHEEEFRALGL 108
Query: 137 NVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE 196
+K + H + + +K+ V+ +R T +V++K+ E+
Sbjct: 109 TSRKNLC--------LHPSVKR-----EKSG-----TVVDARCRSLTAGFVKEKKERGED 150
Query: 197 CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMA 256
+L C +N+ + H + G V ++ L G+ + C Y++AR M
Sbjct: 151 VEL--------CVYHENLDLLEPHNLVPPG----VFTLDGLSRYGEEHKQCPYFSARRMM 198
Query: 257 DDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLK- 314
++ Y Y+++P I + ++ K I++ DEAHNI+++ ++ S+D+ ED L K
Sbjct: 199 PWCNIIIYSYHYLLDPKIAERVSRELSKDCIVVFDEAHNIDNVCIESLSIDLSEDSLRKA 258
Query: 315 ------LQMELEQVCSVNPMI----YQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWT 364
L+ +E + S + Y L+E Q+ A A+ E Q +
Sbjct: 259 TRGANNLERRIEDMKSTDEEKLKNEYSKLVEGLQE---------AEKARDEDQFISNPVL 309
Query: 365 GDKALRELQEANISR-QCFPILLECATKAIK---EATDTESELP-----HLSGMSVI--- 412
D L+E NI R + F L+ + +K + T T SE P HL ++ I
Sbjct: 310 PDDLLKEAVPGNIRRAEHFISFLKRFIEYLKTRMKVTHTISETPPSFLTHLKDLTYIERK 369
Query: 413 --------------TLEGL-------FSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPG 451
TLE + + F + ++ + L L+ + + P
Sbjct: 370 PLRFCAERLTSLVRTLELVNIEDYQPLQEVATFATLVATYDKGFVLILEPFESEAATVPN 429
Query: 452 GNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVID 511
L CL+ A+ K V + S+I+TSGTLSP+ + LG F L+ + +
Sbjct: 430 P----ILHFTCLDAAIAIKPVFDRFSSVIITSGTLSPLEMYPKMLG--FTAVLQESYSMT 483
Query: 512 VDLQ-VLTSVISTGPDNYPLNASYK---------------------TADG-------YKL 542
+ + L +++ G D +++S+ T DG Y
Sbjct: 484 LARRSFLPMIVTRGSDQAQVSSSFGIRNDPGVVRNYGSLVTEFARITPDGVVVFFPSYLY 543
Query: 543 MEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRV 602
ME + + W+ G ++ K + VE + + L+ Y + G + R
Sbjct: 544 MESIISMWQGMGILDQIWNYKLILVETPDAQESS--LALETYRTACCNGRGAILFCVARG 601
Query: 603 KREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKY-NDTYRSS 661
K D + + G R + +G+PF + + ++ + YR
Sbjct: 602 KVSEGIDFD--------HHYG-------RAVLCIGVPFQYTESRILKARLEFLRENYR-- 644
Query: 662 KNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIK 721
+ N++ A R Q +GR +R + DYG ++L D RF ER R + KW+ +++
Sbjct: 645 ---IRENDFLSFDAIRHAAQCLGRVLRGKDDYGVMVLADRRF--ERKRPQLPKWINQAML 699
Query: 722 QYD---SFDASLEGLKSFFR 738
+ S D ++ K+F R
Sbjct: 700 DSETNLSTDMAVSNAKNFLR 719
>gi|124808195|ref|XP_001348254.1| DNA-repair helicase, putative [Plasmodium falciparum 3D7]
gi|23497145|gb|AAN36693.1| DNA-repair helicase, putative [Plasmodium falciparum 3D7]
Length = 1160
Score = 125 bits (315), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 102/388 (26%), Positives = 161/388 (41%), Gaps = 102/388 (26%)
Query: 458 LSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELG---VQFGTCLEAPHVID-- 511
+SL C + + + + SII+TSGTLSP+ FS +L F LE HVI
Sbjct: 539 ISLLCFSATASLCGIIKEKINSIIVTSGTLSPIEPFSKQLSGNYFSFKHILENDHVIKSH 598
Query: 512 ---------VDLQVLTSVIST-GPDNYPLNASYKTAD--------------GYKLMEKLC 547
+ Q+L S +NY + D Y M +
Sbjct: 599 QLFVGCMTHYNNQILLSTYENRANENYIRSLGNCIFDIIVCIPYGVLIFFSSYSSMTETV 658
Query: 548 NRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGN 607
N W++ + ++N K +FVEP + D + +L Y +++KKR
Sbjct: 659 NSWKKMKIYDKINTYKTIFVEPNKAT--DLKDILDQYE---------ILIKKKR------ 701
Query: 608 NDLNTIESQENANKKGASFLAVCRGKI---------------VVGIPFPNINDIQVSLKK 652
KGA + VCRGKI + G+P+ N+ D ++ KK
Sbjct: 702 --------------KGAILMGVCRGKISEGIDFKDDCCRAVIICGLPYGNVYDSKIIFKK 747
Query: 653 KYNDTYRSSK------------NLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLD 700
++ D ++ K N+ GN+WY +A R++NQ+IGR IRH+ DYGAI LD
Sbjct: 748 EFLDNFKYQKTDERPNSSNITSNISKGNKWYNEEAMRSINQSIGRVIRHKNDYGAIFFLD 807
Query: 701 ERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFRDVKGWVGKKMFNGLEN-----S 755
RF + ISKW+R + Y + + FF ++F GL N
Sbjct: 808 SRFSNNQRIKEISKWVRTHFRIYRDVEQIQSDIDKFF---------ELFKGLNNPLQLQK 858
Query: 756 DNDVDHVSSMDQCKEVTKQNTQELNKSD 783
D +++ S+ + + N ++N S+
Sbjct: 859 DQNINQKSNNTKIMNIYNDNIHDMNNSN 886
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 152/316 (48%), Gaps = 50/316 (15%)
Query: 18 YHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLA 77
Y + I+V FPY+ Y Q +M V+S L + + +A+LESPTGTGK+L LLC++++
Sbjct: 22 YTINDIEVYFPYELYDCQYNYMLSVLSALKKRE-----NAILESPTGTGKTLCLLCASIS 76
Query: 78 WQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKN 137
+ V D L G F S + + + +N++
Sbjct: 77 Y----------------------VVDILEKKGHFNENINISENNKNI---SLEFGKSNES 111
Query: 138 VKKKMT----PTIFYASRTHSQISQVISEYKKT-------AYRVPMAVLASRKHYCTNK- 185
V KK+ P I YASRTHSQ+ QVI E K Y++ +L SR C +
Sbjct: 112 VPKKVVANEFPKIIYASRTHSQLKQVIKELKNVYFIKNNEKYKLLTTILGSRDQLCVHNI 171
Query: 186 -YVRDKENIDEECKLLLGDRNLGCPQ---FKNVHKVRGHPSLQKGGCHEVHDIEDLVNVG 241
Y ++ CK +N C K ++K++ H + +I +VG
Sbjct: 172 NYNYKGTLLNNMCKR--TRKNGECIYHNGLKYLYKLK-HLFTTPMDVETLSEIGKGNSVG 228
Query: 242 QVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARD 301
Q + C +YA R + ++ ++ PY+Y+ R ++++++ +I+I+DE HNIE++A +
Sbjct: 229 QNIHFCPFYATREIQNECHIILLPYNYLFEESTRKILKLNLENSIIIIDEGHNIENVAEE 288
Query: 302 AGSVDI-DEDVLLKLQ 316
A S + D D+ L L+
Sbjct: 289 AVSFKLKDTDLNLFLE 304
>gi|71020135|ref|XP_760298.1| hypothetical protein UM04151.1 [Ustilago maydis 521]
gi|46100007|gb|EAK85240.1| hypothetical protein UM04151.1 [Ustilago maydis 521]
Length = 850
Score = 125 bits (315), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 177/812 (21%), Positives = 315/812 (38%), Gaps = 178/812 (21%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+++ + V FPY + Y Q +M + TLD +GHC +LE P+GTGK++SLL +
Sbjct: 3 FYIDELPVLFPYPKIYPEQYAYMTDLKRTLDA---NGHC--VLEMPSGTGKTVSLLSLIV 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLAN---------------GGGFIPESQPSTIP 121
++QQ K +L S + P+ E L G ESQ S P
Sbjct: 58 SYQQFHPAKRKLIYCSRTVPEIEKALAELKRLMEYRARYNVQQDQASGVLKKESQSSDRP 117
Query: 122 PSTNGQTAQVAMNNKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHY 181
N + MN K T SQ+ +++ L+SRK+
Sbjct: 118 GEHN-----IEMNGKG-------------NTGSQMEDILA-----------LGLSSRKNL 148
Query: 182 CTNKYV---RDKENIDEECKLLL-------GDRNLGCPQFKNVHKVRGHPSLQKGGCHEV 231
C + V R + +D C+ + G ++ G + N H+ G + V
Sbjct: 149 CIHPDVSRERKGKVVDARCRDMTSSWACEKGRQDPGSVELCNFHEELGKMEPGQLIPQGV 208
Query: 232 HDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILD 290
+E++ + C Y+A R M ++ + Y+++P + + ++ K AI++ D
Sbjct: 209 WTLEEVKEYAREKAICPYFAIRRMMPFVDIIIYSFHYLLDPKVAEQVSKEMSKDAIVVFD 268
Query: 291 EAHNIEDIARDAGSVDIDEDVLLKLQMELEQVCS-VNPMIYQPLIEMTQDLVGWIERRKA 349
EAHNI+++ ++ S+D+ +L + Q+ V+ + ++ + +E +
Sbjct: 269 EAHNIDNVCIESLSIDLTRPMLDSAYRSINQLSERVDEIKKTDASKLQDEYARLVEGLQQ 328
Query: 350 TLAKREFQHFFS-CWTGDKALRELQEANISR-QCFPILLECATKAIKE--------ATDT 399
+RE + F + D L+E NI R + F L+ + +K A
Sbjct: 329 QGEQREAESFMANPVLPDDLLQEAVPGNIRRAEHFVAFLKRFVEYLKTRMRVLHVVAETP 388
Query: 400 ESELPHLSGMSVITLEGL---------------------FSSL---TYFFSRNGSHVSDY 435
S L HL ++ I + L FS+L F + ++ +
Sbjct: 389 ASFLQHLKDITYIERKPLRFCAERLRMLVGTLELTRLDEFSALQKVAAFATLVATYDKGF 448
Query: 436 QLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSE 495
L L+ + ++ P + T CL+ ++ V E S+I+TSGT+SP++ +
Sbjct: 449 LLILEPFETENATVPNPIFHFT----CLDASLAIAPVFERFSSVIITSGTISPLDMYPKM 504
Query: 496 LGVQFGTCLEAPHVIDVDLQ-VLTSVISTGPDNYPLNASYK------------------- 535
L +F ++ + + + Q L VI+ G D +++ ++
Sbjct: 505 L--KFDAIVQESYAMTLTRQCFLPLVITRGSDQVAISSRFEVRNDPAVVRNYGSILIEYA 562
Query: 536 --TADG-------YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYN 586
DG Y ME + W + G + K +F+E + I L++Y
Sbjct: 563 KCVPDGIVAFFPSYLYMESIVAAWHDMGILDEVWKYKLIFIETPDAPETS--IALENYRR 620
Query: 587 SISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFP-NIND 645
+ G +GA L+V RGK+ GI F N
Sbjct: 621 ACDNG------------------------------RGAILLSVARGKVSEGIDFDHNYGR 650
Query: 646 IQVSLKKKYNDTYRSSKNL------------LSGNEWYCNQAFRALNQAIGRCIRHRFDY 693
+ Y Y S+ L + N++ A R Q +GR +R + DY
Sbjct: 651 AVIMFGVPYQ--YTESRILKARLEFLRDNFRIRENDFLTFDAMRHAAQCVGRVLRGKTDY 708
Query: 694 GAIILLDERFQEERNRAHISKWLRKSIKQYDS 725
G ++ D+RF R + KW+ + IK+ S
Sbjct: 709 GLMVFADKRFARADKRNKLPKWIAQYIKETHS 740
>gi|294659657|ref|XP_462055.2| DEHA2G12056p [Debaryomyces hansenii CBS767]
gi|199434130|emb|CAG90541.2| DEHA2G12056p [Debaryomyces hansenii CBS767]
Length = 794
Score = 125 bits (314), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 180/808 (22%), Positives = 326/808 (40%), Gaps = 164/808 (20%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+++ + + FPY + Y Q +MC + TLD G+C +LE P+GTGK++SLL T+
Sbjct: 3 FYIDDLPILFPYPRIYPEQYAYMCDIKKTLDVG---GNC--ILEMPSGTGKTISLLSITV 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNK 136
A+Q + ++ S + + E L N F E G +++ K
Sbjct: 58 AYQMHYPEHRKVVYCSRTMSEIEKALIELHNLMKFRAEQLGYVEEFRGLGLSSR-----K 112
Query: 137 NVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE 196
N+ + PTI S+ I V+ E RV L K N + ++ D E
Sbjct: 113 NLC--LHPTI---SKERKGI--VVDE---KCRRVTNGQL---KKKIENGLINTEQTQDPE 159
Query: 197 CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMA 256
L C ++++++ H + G V+ + L+N + V C Y+ R M
Sbjct: 160 ANAL-------CSFHESLNEMDQHNLIPAG----VYSFDALINHCKEVGTCPYFTVRRMI 208
Query: 257 DDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLKL 315
++ Y Y+++P I + +I K +I+I DEAHNI+++ ++ S+D+ +D L +
Sbjct: 209 PFCNIIIYSYHYLLDPKIADRVSKEISKDSIIIFDEAHNIDNVCIESLSLDLTDDTLKRA 268
Query: 316 QMELEQVC-SVNPMIYQPLIEMTQDLVGWIE-RRKATLAK-------------------- 353
++ +V+ M Q ++ + +E R+A +A+
Sbjct: 269 TRGANKLGDAVDDMKSQDSEKLQNEYEKLVEGLRQAEIARDEELFMSNPTLPQDLLDEAI 328
Query: 354 ----REFQHFFSCW--------TGDKALRELQEANIS-RQCFPILLECATKAIKEATDTE 400
R+ +HF S T K L + E IS Q L K +K ++
Sbjct: 329 PGNIRKAEHFISFLKRFIEYLKTRMKVLHVISETPISFLQHLKDLTFIDRKPLKFCSERL 388
Query: 401 SELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSL 460
S L +S I + F + ++ + +QL L+ + S P L
Sbjct: 389 SLLVRTLELSEIEDFTALKDIATFATLVSTYDTGFQLILEPFETEGSTVPNP----ILHF 444
Query: 461 WCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQ-VLTS 519
CL+ ++ K V E S+I+TSGT+SP++ + L F T ++ + + + + L
Sbjct: 445 TCLDASIAIKPVFERFSSVIITSGTISPLDMYPKMLN--FQTVIQESYTMTLARRSFLPM 502
Query: 520 VISTGPDNYPLNASYK---------------------TADG-------YKLMEKLCNRWR 551
+++ G D +++ ++ DG Y ME + + W+
Sbjct: 503 IVTKGSDQVSISSRFEIRNDPSVVRNYGSLLIEFAKIVPDGMVVFFPSYLYMESIISMWQ 562
Query: 552 ETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLN 611
G + K + VE + + L+ Y + S G
Sbjct: 563 NMGVLDEVWKYKLILVETPDAQET--SLALETYRKACSNG-------------------- 600
Query: 612 TIESQENANKKGASFLAVCRGKI---------------VVGIPFPNINDIQVSLKKKY-N 655
+GA L+V RGK+ ++GIPF + + ++
Sbjct: 601 ----------RGAILLSVARGKVSEGIDFDHHYGRTVLMIGIPFQYTESRILKARLEFLR 650
Query: 656 DTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKW 715
D Y+ + N++ A R Q +GR +R + DYG ++L D RF ++N+ + KW
Sbjct: 651 DHYQ-----IRENDFLSFDAMRHAAQCLGRVLRGKDDYGIMVLADRRFSRKKNQ--LPKW 703
Query: 716 LRKSIKQYD---SFDASLEGLKSFFRDV 740
+ +++ D S D +L K F R +
Sbjct: 704 IAQALNDSDTNLSTDMALANAKKFLRSL 731
>gi|452981603|gb|EME81363.1| hypothetical protein MYCFIDRAFT_189512 [Pseudocercospora fijiensis
CIRAD86]
Length = 776
Score = 125 bits (314), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 174/795 (21%), Positives = 324/795 (40%), Gaps = 148/795 (18%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+++G + V FPY + Y Q +MC + TLD GHC +LE P+GTGK++SLL +
Sbjct: 3 FYIGDLPVLFPYPRIYPEQYEYMCALKQTLDSG---GHC--VLEMPSGTGKTVSLLSLIV 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNK 136
A+QQ+ +L S + + E L + + G T++ K
Sbjct: 58 AYQQHYPEHRKLIYCSRTMSEIEKALAELKALMKYRSDQLGHAEDFRGLGLTSR-----K 112
Query: 137 NVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE 196
N+ H + Q +K+ +V+ +R T +V++K++ E+
Sbjct: 113 NLC------------LHPSVKQ-----EKSG-----SVVDARCRSLTAAFVKEKKDRGED 150
Query: 197 CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMA 256
+ C N+ + H + G V ++ ++ G+ + C Y+ AR M
Sbjct: 151 VDV--------CIYHDNLDLLEPHNLIPPG----VWTLDGMLRYGEQQKQCPYFTARRMM 198
Query: 257 DDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLKL 315
++ Y Y+++P I + ++ K I++ DEAHNI+++ ++ S+D+ ED L K
Sbjct: 199 PFCNVIIYSYHYLLDPKIAERVSRELSKDCIVVFDEAHNIDNVCIESLSIDLTEDSLRKA 258
Query: 316 ---QMELEQVCSVNPMIYQPLIEMTQDLVGWIE-RRKATLAKREFQHFFSCWTGDKALRE 371
LE+ + M ++ + +E R+A A+ E + D L+E
Sbjct: 259 ARGAANLER--EITTMKQTDADKLQNEYAKLVEGLREADAARDEGAFMSNPALPDDLLKE 316
Query: 372 LQEANISR--------QCFPILLECATKAIKEATDT-ESELPHLSGMSVITLEGL----- 417
NI R + F L+ K + ++T S L HL ++ I + L
Sbjct: 317 AVPGNIRRAEHFVAFLKRFIEYLKTRMKVLHVISETPPSFLQHLKELTFIERKPLRFCAE 376
Query: 418 -------------------FSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTL 458
+ F + ++ + + L L+ Y + P L
Sbjct: 377 RLTSLVRTLELTNIEDYQPLQEVATFATLAATYDTGFLLILEPYESDTATVPNP----IL 432
Query: 459 SLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQ-VL 517
CL+ A+ K V + S+I+TSGT+SP+ + LG F ++ + + + + L
Sbjct: 433 HFTCLDAAIAIKPVFDRFSSVIITSGTISPLEMYPKMLG--FECVVQESYTMTLARKSFL 490
Query: 518 TSVISTGPDNYPLNASYK---------------------TADG-------YKLMEKLCNR 549
+++ G D +++ ++ T DG Y ME + +
Sbjct: 491 PMIVTRGSDQGQISSGFQTRNDPANVRNYGNLLIEFSKLTPDGIVVFFPSYLYMESVISM 550
Query: 550 WRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNND 609
W+ G + K + VE SQE + L+ Y + S G ++ R K D
Sbjct: 551 WQTMGILDSVWKSKLILVE-TPDSQET-SLALETYRTACSNGRGAVLLCVARGKVSEGID 608
Query: 610 LNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKY-NDTYRSSKNLLSGN 668
+ + G R + +G+PF + + ++ +TYR + N
Sbjct: 609 FD--------HHYG-------RTVLCIGVPFQYTESRILKARLEFLRETYR-----IKEN 648
Query: 669 EWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYD---S 725
++ A R Q +GR +R + DYG +++ D+RF ++RN+ + KW+ + D S
Sbjct: 649 DFLSFDAMRHCAQCLGRVLRGKDDYGVMVMADKRFAKKRNQ--LPKWINNQLMDSDTNMS 706
Query: 726 FDASLEGLKSFFRDV 740
D ++ K F + +
Sbjct: 707 VDQAVAAAKKFLKQM 721
>gi|340381260|ref|XP_003389139.1| PREDICTED: regulator of telomere elongation helicase 1-like
[Amphimedon queenslandica]
Length = 298
Score = 125 bits (313), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 100/304 (32%), Positives = 141/304 (46%), Gaps = 53/304 (17%)
Query: 501 GTCLEAP--HVIDVDLQVLTSVISTGPDNYPLNASYKTADGYKLMEKLCNRWRETGQWSR 558
G L+ P HVI D QV V+S GPDN LN+SY+T M+ L N + R
Sbjct: 7 GESLKKPGSHVIGQD-QVWIGVVSKGPDNIHLNSSYQTRFTPAYMDSLGN---TLVNFFR 62
Query: 559 LNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQEN 618
+ L P S E ++ H+ +S E +
Sbjct: 63 IIPDGVLVFFP---SYVVMETLVTHWKEVMSA---------------------YYEKIGS 98
Query: 619 ANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKKYNDTYRSSKN 663
A+K G +F VCRGK I+ G+P+P + +V LK +Y RS+ N
Sbjct: 99 ADKVGGAFFGVCRGKVSEGLDFADNNGRAVIITGLPYPPFAEPKVQLKMEYLKDARSNFN 158
Query: 664 ---LLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSI 720
L++ +WY QA RA+NQAIGR IRH+ DYGAIIL DERF R + + WLR +
Sbjct: 159 RTELITDKQWYNQQATRAVNQAIGRVIRHKNDYGAIILCDERFAYSRGQDDLPLWLRPQL 218
Query: 721 KQYDSFDASLEGLKSFFRDVKGWVGKKMFNGLENSDNDV--DHVSSM-DQCKEVTKQNTQ 777
++YD F + L SFF+ + G + ++NS DV D+ S + + V K N
Sbjct: 219 QKYDKFGPAQRDLTSFFKIAQNKYGHLV--SIKNSLPDVKPDYTSGIVGGARGVVKLNPD 276
Query: 778 ELNK 781
+ K
Sbjct: 277 AIFK 280
>gi|168039045|ref|XP_001772009.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676610|gb|EDQ63090.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 750
Score = 125 bits (313), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 185/820 (22%), Positives = 315/820 (38%), Gaps = 200/820 (24%)
Query: 18 YHVGGIQVEFPYQ-PYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+ + G+ V FPY+ Y Q +M + TLD GHC LLE PTGTGK+++LL
Sbjct: 3 FKIEGLTVYFPYEFIYPEQYDYMVDLKRTLDAR---GHC--LLEMPTGTGKTITLLSLIT 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNK 136
++ +L + + + E V + L + ++ G+ A++
Sbjct: 58 SYMLANPSVGKLIYCTRTVHEMEKVLEELRKLQAYQEKAL---------GKAAKMLALGL 108
Query: 137 NVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE 196
+ +K + H Q+S S A RK T +VR
Sbjct: 109 SSRKNLC--------IHPQVSGEGSRESVDA--------GCRK--LTASWVRS------- 143
Query: 197 CKLLLGDRNLG-CPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSM 255
L L + N+ CP ++ K G +L G + +HD+ G+ R C Y+ AR M
Sbjct: 144 --LALDNPNIELCPYYEGYEK-GGADALLPSGVYTLHDLR---GFGREKRWCPYFLARHM 197
Query: 256 ADDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLK 314
A +V Y Y+++P + G + ++ K +++ DEAHNI+++ +A SV+I + L
Sbjct: 198 IQFANVVVYNYQYLLDPKVAGIISKEMEKECVVVFDEAHNIDNVCIEALSVNIRQQTLDG 257
Query: 315 LQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHF--------------- 359
L QV + IE+ KAT A R Q +
Sbjct: 258 ATRNLSQVTQL------------------IEKSKATDANRLRQEYSRLVEGLAQRGNLAG 299
Query: 360 FSCWTGDKALRE--LQEA---NISR-QCFPILLECATKAIK-----EATDTESELPHLSG 408
W + AL + LQEA NI R + F L+ + IK E ++ES + ++
Sbjct: 300 TDTWLANPALPQDILQEAVPGNIRRAEHFVAFLKRLVQYIKNRMITEKVESESPVSFVTA 359
Query: 409 MS--------------------VITLE-------GLFSSLTYFFSRNGSHVSDYQLALQK 441
+ ++TLE ++ F + G++ + + ++
Sbjct: 360 LQNQAGIDQKSLKFCYDRLHSLLLTLEVTNTDEFMYIQTVCDFATLVGTYTRGFTIIIEP 419
Query: 442 YIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFG 501
Y +R P L L CL+ ++ K V E S+++TSGTLSP++ + L F
Sbjct: 420 YDERMPNIPDP----VLQLSCLDSSLAIKPVFEKFQSVVITSGTLSPIDLYPRLL--NFH 473
Query: 502 TCLEAPHVIDVDLQVLTSVIST-GPDNYPLNASY---------------------KTADG 539
+ + + + L ++ T G D P++ + DG
Sbjct: 474 PVISNSYKMTLTRDCLCPMVLTRGSDQLPVSTKFDMRSDPGVVRNYGRLLLEMVTAVPDG 533
Query: 540 -------YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGS 592
Y M+ + N W E G + K +F+E +Q+ E L ++ +
Sbjct: 534 IVCFFVSYSYMDGIVNSWNEMGILQEVMQHKLVFIE----TQDVVETTLA--LDNYRRAC 587
Query: 593 KCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPN-----INDIQ 647
C +GA F +V RGK+ GI F +
Sbjct: 588 DCG--------------------------RGAVFFSVARGKVAEGIDFDRHYGRLVIMYG 621
Query: 648 VSLKKKYNDTYRSSKNLL------SGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDE 701
V + + R+ L N++ A R Q +GR IR + DYG +I D+
Sbjct: 622 VPFQYTLSRILRARLEYLRETFQIKENDFLTFDAVRQAAQCVGRVIRSKADYGMMIFADK 681
Query: 702 RFQEERNRAHISKWLRKSIKQYD---SFDASLEGLKSFFR 738
R+ R+ + W+ +++ S D S+ + F R
Sbjct: 682 RYNRHDKRSKLPGWILSHLREAHLNLSTDMSVHIAREFLR 721
>gi|289802977|ref|NP_001166280.1| excision repair cross-complementing rodent repair deficiency,
complementation group 2 [Rattus norvegicus]
gi|149056774|gb|EDM08205.1| rCG54110 [Rattus norvegicus]
Length = 760
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 187/803 (23%), Positives = 311/803 (38%), Gaps = 165/803 (20%)
Query: 20 VGGIQVEFPYQ-PYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
V G+ V FPY Y Q +M + TLD H +LE P+GTGK++SLL +A+
Sbjct: 5 VDGLLVYFPYDYIYPEQFSYMLELKRTLD-----AKGHGVLEMPSGTGKTVSLLALIVAY 59
Query: 79 QQNCKLK-NQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKN 137
Q+ L+ +L S + P+ E V + L F + + +P +++ N
Sbjct: 60 QRAYPLEVTKLIYCSRTVPEIEKVIEELRKLLSFYEQQEGEKLPFLGLALSSR---KNLC 116
Query: 138 VKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEEC 197
+ ++TP F + + H T YVR +
Sbjct: 117 IHPEVTPLRFGKD------------------------VDGKCHSLTASYVRAQYQ----- 147
Query: 198 KLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMAD 257
D +L +F G G +++++DL +GQ C Y+ AR
Sbjct: 148 ----QDASLPHCRFYEEFDTHGRQVPLPAG---IYNLDDLKALGQRQGWCPYFLARYSIL 200
Query: 258 DAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQ 316
A +V Y Y+++P I + ++ + A+++ DEAHNI+++ D+ SV++ L + Q
Sbjct: 201 HANVVVYSYHYLLDPKIADLVSKELARKAVVVFDEAHNIDNVCIDSMSVNLTRRTLDRCQ 260
Query: 317 MELE----QVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALREL 372
L+ V + Q L + + LV + R+A+ A+ H + D+ L+E
Sbjct: 261 SNLDTLQKTVLRIKETDEQRLRDEYRRLVEGL--REASAARETDAHLANPVLPDEVLQEA 318
Query: 373 QEANI-SRQCFPILLECATKAIK-----EATDTESELPHLSGMS---------------- 410
+I + + F L + +K + ES LSG++
Sbjct: 319 VPGSIRTAEHFLGFLRRLLEYVKWRLRVQHVVQESPPAFLSGLAQRVCIQRKPLRFCAER 378
Query: 411 ----VITLE----GLFSSLTYFFSRNGSHVSDYQLALQKYIK-RDSKNPGGNWTHTLSLW 461
+ TLE FS LT + + VS Y I+ D + P L
Sbjct: 379 LRSLLHTLEIADLADFSPLT-LLANFATLVSTYAKGFTIIIEPFDDRTPTIT-NPILHFS 436
Query: 462 CLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELG---VQFGT--------CLEAPHVI 510
C++ ++ K V E S+I+TSGTLSP++ + L V T CL P +I
Sbjct: 437 CMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMATFTMTLARVCL-CPMII 495
Query: 511 DV--DLQVLTSVISTGPD--------NYPLNASYKTADG-------YKLMEKLCNRWRET 553
D ++S T D N L S DG Y+ ME W E
Sbjct: 496 GRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFTSYQYMESTVASWYEQ 555
Query: 554 GQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTI 613
G + K LF+E + G++ + L+ Y + G
Sbjct: 556 GILENIQRNKLLFIETQDGAETS--VALEKYQEACENG---------------------- 591
Query: 614 ESQENANKKGASFLAVCRGKIVVGIPF-------------PNINDIQVSLKKKYNDTYRS 660
+GA L+V RGK+ GI F P + LK + Y
Sbjct: 592 --------RGAILLSVARGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLE--YLR 641
Query: 661 SKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSI 720
+ + N++ A R Q +GR IR + DYG ++ D+RF R + +W+++ +
Sbjct: 642 DQFQIRENDFLTFDAMRHAAQCVGRAIRGKTDYGLMVFADKRFARADKRGKLPRWIQEHL 701
Query: 721 KQYD---SFDASLEGLKSFFRDV 740
+ + D ++ K F R +
Sbjct: 702 TDSNLNLTVDEGVQVAKYFLRQM 724
>gi|410982712|ref|XP_003997692.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit [Felis catus]
Length = 760
Score = 124 bits (312), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 189/803 (23%), Positives = 311/803 (38%), Gaps = 165/803 (20%)
Query: 20 VGGIQVEFPYQ-PYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
V G+ V FPY Y Q +M + TLD H +LE P+GTGK++SLL +A+
Sbjct: 5 VDGLLVYFPYDYIYPEQFSYMLELKRTLD-----AKGHGVLEMPSGTGKTVSLLALIMAY 59
Query: 79 QQNCKLK-NQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKN 137
Q+ L+ +L S + P+ E V + L F + + +P +++ N
Sbjct: 60 QRAYPLEVTKLIYCSRTVPEIEKVIEELRKLLHFYEKQEGEKLPFLGLALSSR---KNLC 116
Query: 138 VKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEEC 197
+ ++ P F + + H T YVR +
Sbjct: 117 IHPEVMPLRFGKD------------------------VDGKCHSLTASYVRAQYQ----- 147
Query: 198 KLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMAD 257
D +L +F V G G +++++DL +G+ C Y+ AR
Sbjct: 148 ----QDPSLPHCRFYEEFDVHGRQVPLPAG---IYNLDDLKALGRRQGWCPYFLARYSIL 200
Query: 258 DAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQ 316
A +V Y Y+++P I + ++ + A+++ DEAHNI+++ D+ SV+I L + Q
Sbjct: 201 HANVVVYSYHYLLDPKIAELVSKELARKAVVVFDEAHNIDNVCIDSMSVNITRRTLDRCQ 260
Query: 317 MELE----QVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALREL 372
LE V + Q L E + LV + R+A+ A+ H + D+ L+E
Sbjct: 261 GNLETLQKTVLRIKETDEQRLREEYRRLVEGL--REASAARETDAHLANPVLPDEVLQEA 318
Query: 373 QEANI-SRQCFPILLECATKAIK-----EATDTESELPHLSGMS---------------- 410
+I + + F L + +K + ES LSG++
Sbjct: 319 VPGSIRTAEHFLGFLRRLLEYVKWRLRVQHVVQESPPAFLSGLAQRVCIQRKPLRFCAER 378
Query: 411 ----VITLE----GLFSSLTYFFSRNGSHVSDYQLALQKYIK-RDSKNPGGNWTHTLSLW 461
+ TLE FS LT + + VS Y I+ D + P L
Sbjct: 379 LRSLLHTLEIADLADFSPLT-LLANFATLVSTYAKGFTIIIEPFDDRTPTIA-NPILHFS 436
Query: 462 CLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELG---VQFGT--------CLEAPHVI 510
C++ ++ K V E S+I+TSGTLSP++ + L V T CL P +I
Sbjct: 437 CMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMATFTMTLARVCL-CPMII 495
Query: 511 DV--DLQVLTSVISTGPD--------NYPLNASYKTADG-------YKLMEKLCNRWRET 553
D ++S T D N L S DG Y+ ME W E
Sbjct: 496 GRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFTSYQYMESTVASWYEQ 555
Query: 554 GQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTI 613
G + K LF+E + G++ + L+ Y + G
Sbjct: 556 GILENIQRNKLLFIETQDGAETS--VALEKYQEACENG---------------------- 591
Query: 614 ESQENANKKGASFLAVCRGKIVVGIPF-------------PNINDIQVSLKKKYNDTYRS 660
+GA L+V RGK+ GI F P + LK + Y
Sbjct: 592 --------RGAILLSVARGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLE--YLR 641
Query: 661 SKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSI 720
+ + N++ A R Q +GR IR + DYG ++ D+RF R + +W+++ +
Sbjct: 642 DQFQIRENDFLTFDAMRHAAQCVGRAIRGKTDYGLMVFADKRFARADKRGKLPRWIQEHL 701
Query: 721 KQYD---SFDASLEGLKSFFRDV 740
+ + D ++ K F R +
Sbjct: 702 TDANLNLTVDEGVQVAKYFLRQM 724
>gi|195430790|ref|XP_002063431.1| GK21904 [Drosophila willistoni]
gi|194159516|gb|EDW74417.1| GK21904 [Drosophila willistoni]
Length = 769
Score = 124 bits (312), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 173/785 (22%), Positives = 318/785 (40%), Gaps = 162/785 (20%)
Query: 20 VGGIQVEFPYQ-PYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
V G+ V FPY+ Y Q +M + +LD GHC LLE P+GTGK+ +LL +A+
Sbjct: 5 VDGLLVYFPYEYIYPEQYAYMLELKRSLDA---KGHC--LLEMPSGTGKTATLLSLIVAY 59
Query: 79 Q-QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKN 137
++ + +L S + P+ E V L N + + S PP+ G
Sbjct: 60 MIEHPETIRKLIYCSRTVPEIEKVIAELQNL--MVYYERHSDNPPAMTG----------- 106
Query: 138 VKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEEC 197
+ +SR + I +S+ ++ + + + T YVRD+ +D E
Sbjct: 107 --------LVLSSRKNMCIHPEVSKEREGK------AVDGKCYGLTASYVRDRHEMDAET 152
Query: 198 KLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMAD 257
+ C F+ +L G ++ I+D+ G+ C Y+ AR
Sbjct: 153 PI--------CQYFEGFSLEGKEAALPVG----IYSIDDMKEFGRSRNWCPYFMARHAIA 200
Query: 258 DAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQ 316
A +V Y Y+++P I + ++ + + ++ DEAHNI+++ D+ SV I+ + +
Sbjct: 201 HAHIVVYSYHYLLDPKIAQVVSKEMSRESCVVFDEAHNIDNVCIDSMSVKINRRTVERST 260
Query: 317 MELEQVCSVNPMI-----------YQPLIEMTQDLVGWIERRKATLAK------------ 353
L Q+ + I YQ +++ +D ++R +
Sbjct: 261 NALNQLTKLVQEIREEDTNRLNEEYQRMVQGLKD--ATVQRDTDMILANPVLPNDVLTEV 318
Query: 354 -----REFQHFFSCW--------TGDKALRELQEANI-------SRQCFPILLECATKAI 393
R HF S T + +QE++ S+ C K +
Sbjct: 319 VPGNIRNADHFLSFLRRFIEYIKTRLRVHHVVQESSAGFLKDISSKICI------ERKPL 372
Query: 394 KEATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGN 453
+ + S L ++ +T G + +T+F + ++ + + ++ + D K P +
Sbjct: 373 RFCAERLSSLLRTLEITDLTEFGALTLITHFATLVSTYTKGFTIIIEPF---DDKTPTVS 429
Query: 454 WTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVD 513
L C++ ++ V ++++TSGTLSPM+ + P ++D D
Sbjct: 430 -NPILYFSCMDSSIAMAPVFSRFQTVVITSGTLSPMDMY--------------PKILDFD 474
Query: 514 LQVLTS-------------VISTGPDNYPLNASYKTADGYKLMEKLCNRWRETGQWSRLN 560
V++S ++S G D +++ ++T + ++ R GQ
Sbjct: 475 PVVMSSFTMTLARPCLLPMIVSKGNDQVAISSKFETREDTAVI-------RNYGQLLVEV 527
Query: 561 AKK-PLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENA 619
AK P V S E V+ +Y+ QG ++R K + E ++ T + N
Sbjct: 528 AKTVPDGVVCFFTSYLYLESVVASWYD---QGIVDTLLRYKLLFIETQDNAETSYALMNY 584
Query: 620 NK-----KGASFLAVCRGKIVVGIPF-------------PNINDIQVSLKKKYNDTYRSS 661
K +GA LAV RGK+ G+ F P + LK + + Y
Sbjct: 585 VKACDCGRGAVLLAVARGKVSEGVDFDHHYGRAVLMFGIPYVYTQSRILKARLD--YLRD 642
Query: 662 KNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIK 721
+ + N++ A R Q +GR +R + DYG +I D+RF + R+ + KW+++ +
Sbjct: 643 QFQIRENDFLTFDAMRHAAQCVGRALRGKTDYGIMIFADKRFSRQDKRSRLPKWIQEHL- 701
Query: 722 QYDSF 726
DSF
Sbjct: 702 -VDSF 705
>gi|67525973|ref|XP_661048.1| hypothetical protein AN3444.2 [Aspergillus nidulans FGSC A4]
gi|40743798|gb|EAA62984.1| hypothetical protein AN3444.2 [Aspergillus nidulans FGSC A4]
Length = 994
Score = 124 bits (312), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 173/693 (24%), Positives = 280/693 (40%), Gaps = 154/693 (22%)
Query: 146 IFYASRTHSQISQVISEYKKTAY--------------------RVPMAVLASRKHYCTNK 185
IFY SRTHSQ+ Q SE ++ R+ L SRK+ C N
Sbjct: 197 IFYCSRTHSQLMQFASELRRVTMPSTLPESLRQGLTDEEEQGERIKHISLGSRKNLCINS 256
Query: 186 YVRDKEN---IDEECKLLLGDRN----LGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLV 238
V N I+E C L L N L C S + V DIEDL
Sbjct: 257 RVAALGNPTAINERC-LELQQPNTPAPLRCSYLPTEEDEAKTLSFRDHALATVKDIEDLG 315
Query: 239 NVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDI 298
+G+ + C YYA+R + ++ R A+ + IKG ++I+DEAHN+ D
Sbjct: 316 KLGKKLGLCPYYASRGVVSHSERS-----------ARDALNLSIKGHVVIIDEAHNLMDA 364
Query: 299 ARDAGSVDIDEDVLLKLQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQH 358
+ SV + L +L+ + Q+ + L ++ + + R +++A Q
Sbjct: 365 ISNIHSVTV---TLSQLRTSIFQLTTYARKFKTRLKGKNRNYIAQVIRLISSIAD-HLQS 420
Query: 359 FF--------SCWTGD-------------KALRELQEANISRQCFPILLECATKAIKEAT 397
S + D K R L E+ ++R+ + +KA +A
Sbjct: 421 LIDNKQASEGSVLSSDLMAGKGADQINPYKLCRYLNESKLARKVDGYIDFSQSKANAQA- 479
Query: 398 DTESELPHLSGMS--VITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWT 455
+ +S +P L + ++ L L S FF+ K PG
Sbjct: 480 EPKSTIPVLFHIQSFLLPLMNLSSEGRLFFT---------------------KTPGDIQL 518
Query: 456 HTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFG----TCLEAPHVID 511
H + L+P F+++ E + ++IL GT+SPM+ + + L HVI
Sbjct: 519 HYM---LLDPTNHFREIVEDARAVILAGGTMSPMSDYLNHLFSYVPKDRLNTFSYGHVIP 575
Query: 512 VDLQVLTSVISTGPDNYPLNASYKTADGYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKG 571
+ + ++ G + +Y D K++ L +++L P +
Sbjct: 576 SE-NLTAHTLARGVTGCEFDFTYAGRDAEKMILDLGR------TFTQLCRAIPDGIVAFF 628
Query: 572 GSQEDFEIVLKHYYNSISQGSKCA----VVRKKRVKREG-----------NNDLNTIESQ 616
S E VL + N++ + +K V ++K++ E NN NTI
Sbjct: 629 PSYEYLSRVLNIWKNAVVRENKQTLYETVEKEKQILYESRETELTTDDLLNNYANTI--- 685
Query: 617 ENANK-KGASFLAVC---------------RGKIVVGIPFPNINDIQVSLKKKY--NDTY 658
NK +GA L+V RG ++VG+PFPNI K KY Y
Sbjct: 686 ---NKGRGALLLSVVGGKLSEGINFSDKLGRGVLIVGLPFPNIRSPVWQAKIKYIEQKAY 742
Query: 659 RS-------SKNL---LSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERN 708
R+ S+ L +G ++Y N RA+NQ IGR IRHR DY AI+L+D+R+ +
Sbjct: 743 RNVGSGSEESRRLSAKAAGRDFYENACMRAVNQCIGRAIRHRNDYAAIVLIDKRYGKTSI 802
Query: 709 RAHISKWLRKSIKQYDSF---DASLEGLKSFFR 738
A + W+++S+ + + +L+GL FFR
Sbjct: 803 EAKLPGWIKQSLVKDSALLPAATTLDGLACFFR 835
>gi|255731468|ref|XP_002550658.1| DNA repair helicase RAD3 [Candida tropicalis MYA-3404]
gi|240131667|gb|EER31226.1| DNA repair helicase RAD3 [Candida tropicalis MYA-3404]
Length = 781
Score = 124 bits (312), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 180/845 (21%), Positives = 341/845 (40%), Gaps = 157/845 (18%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+++ + V FPY + Y Q +MC + TLD G+C +LE P+GTGK++SLL T+
Sbjct: 3 FYIDDLPVLFPYPRIYPEQYAYMCDIKKTLDVG---GNC--ILEMPSGTGKTVSLLSLTV 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNK 136
A+Q + ++ S + + E L + E + + + + + +
Sbjct: 58 AYQMHYPEHRKIVYCSRTMSEIEKALIELHK----LMEYRANELGEVEDFRGLGL----- 108
Query: 137 NVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVR---DKENI 193
SR + + IS+ +K V+ + TN ++ +K +
Sbjct: 109 ------------TSRKNLCLHPTISKERKG------VVVDEKCRRITNGQLKSKIEKGIV 150
Query: 194 DEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAAR 253
EE +LL + N C + ++ H + G V+ + L+ + C Y+ R
Sbjct: 151 TEEDQLLNPETNSLCSYHEKLYDYEPHNLIPPG----VYSFDALLRYCKDEGTCPYFTVR 206
Query: 254 SMADDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVL 312
M ++ Y Y+++P I + ++ K +I+I DEAHNI+++ ++ S+D+ ED L
Sbjct: 207 RMIPFCNIIIYSYHYLLDPKIAERVSKELSKDSIIIFDEAHNIDNVCIESLSLDLTEDTL 266
Query: 313 L----------------------KLQMELEQVCS---------------VNPMIYQPLIE 335
KLQ E EQ+ NP++ Q L++
Sbjct: 267 KRATRGANKLGEAIEEMKSQDSEKLQNEYEQLVEGLRQAEIARDQELFMANPVLPQDLLD 326
Query: 336 MTQDLVGWIERRKATLA-KREFQHFFSCWTGDKALRELQEANIS-RQCFPILLECATKAI 393
+ + G I + + +A + F + T K L + E S Q L K +
Sbjct: 327 --EAIPGNIRKGEHFIAFLKRFVEYLK--TRMKVLHVISETPTSFLQHLKDLTYIERKPL 382
Query: 394 KEATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGN 453
+ ++ S L +S + + F + ++ + +QL L+ Y S P
Sbjct: 383 RFCSERLSLLVRTLELSEVEDFNALKDIATFATLVSTYDTGFQLILEPYETEGSTVPNP- 441
Query: 454 WTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVD 513
L CL+ ++ K V E S+I+TSGT+SP++ + + F T ++ + + +
Sbjct: 442 ---ILHFTCLDASIAIKPVFERFSSVIITSGTISPLDMYPKMMN--FQTVIQQSYSMTLA 496
Query: 514 LQ-VLTSVISTGPDNYPLNASYK---------------------TADG-------YKLME 544
+ L +++ G D +++ ++ T DG Y ME
Sbjct: 497 RRSFLPMIVTKGSDQVSISSRFEIRNDPSVVRNYGSLLVEFAKITPDGMVVFFPSYLYME 556
Query: 545 KLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKR 604
+ + W+ G + K + VE + + L+ Y + S G ++ R K
Sbjct: 557 SIISMWQNMGVLDEVWKHKLILVETPDAQETS--LALETYRKACSNGRGAVLLSVARGKV 614
Query: 605 EGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYNDTYRSSKNL 664
D + + G R +++GIPF + + ++ + S K
Sbjct: 615 SEGIDFD--------HHYG-------RTVLMIGIPFQYTESRILKARLEFMRDHFSIKE- 658
Query: 665 LSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYD 724
N++ A R Q +GR +R + DYG ++L D RF ++N+ + KW+ +++ D
Sbjct: 659 ---NDFLSFDAMRHAAQCLGRVLRGKDDYGIMVLADRRFSRKKNQ--LPKWIAQALNDSD 713
Query: 725 SFDASLEGLKSFFRDVKGWVGKKMFNGLENSDNDVDH----VSSMDQCKEVTKQ--NTQE 778
+ + D+ GKK L N D V +++Q +E KQ +E
Sbjct: 714 T---------NLSTDMALATGKKFLRSLAQPSNPKDQEGVSVWNLEQLEEYQKQFKKVEE 764
Query: 779 LNKSD 783
+ ++D
Sbjct: 765 VEEAD 769
>gi|346986337|ref|NP_001231320.1| TFIIH basal transcription factor complex helicase XPD subunit
[Cricetulus griseus]
gi|2495145|sp|Q60452.1|ERCC2_CRIGR RecName: Full=TFIIH basal transcription factor complex helicase XPD
subunit; AltName: Full=CXPD; AltName: Full=DNA excision
repair protein ERCC-2; AltName: Full=DNA repair protein
complementing XP-D cells; AltName: Full=Xeroderma
pigmentosum group D-complementing protein
gi|604908|gb|AAC13749.1| nucleotide excision repair protein [Cricetulus griseus]
Length = 760
Score = 124 bits (311), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 187/803 (23%), Positives = 311/803 (38%), Gaps = 165/803 (20%)
Query: 20 VGGIQVEFPYQ-PYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
V G+ V FPY Y Q +M + TLD H +LE P+GTGK++SLL +A+
Sbjct: 5 VDGLLVYFPYDYIYPEQFSYMLELKRTLD-----AKGHGVLEMPSGTGKTVSLLALIVAY 59
Query: 79 QQNCKLK-NQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKN 137
Q+ L+ +L S + P+ E V + L F + + +P +++ N
Sbjct: 60 QRAFPLEVTKLIYCSRTVPEIEKVIEELRKLLSFYEQQEGEKLPFLGLALSSR---KNLC 116
Query: 138 VKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEEC 197
+ ++TP F + + H T YVR +
Sbjct: 117 IHPEVTPLRFGKD------------------------VDGKCHSLTASYVRAQYQ----- 147
Query: 198 KLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMAD 257
D +L +F G G +++++DL +GQ C Y+ AR
Sbjct: 148 ----QDASLPHCRFYEEFDAHGRQVPLPAG---IYNLDDLKALGQRQGWCPYFLARYSIL 200
Query: 258 DAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQ 316
A +V Y Y+++P I + ++ + A+++ DEAHNI+++ D+ SV++ L + Q
Sbjct: 201 HANVVVYSYHYLLDPKIADLVSKELARKAVVVFDEAHNIDNVCIDSMSVNLTRRTLDRCQ 260
Query: 317 MELE----QVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALREL 372
L+ V + Q L + + LV + R+A+ A+ H + D+ L+E
Sbjct: 261 SNLDTLQKTVLRIKETDEQRLRDEYRRLVEGL--REASAARETDAHLANPVLPDEVLQEA 318
Query: 373 QEANI-SRQCFPILLECATKAIK-----EATDTESELPHLSGMS---------------- 410
+I + + F L + +K + ES LSG++
Sbjct: 319 VPGSIRTAEHFLGFLRRLLEYVKWRLRVQHVVQESPPAFLSGLAQRVCIQRKPLRFCAER 378
Query: 411 ----VITLE----GLFSSLTYFFSRNGSHVSDYQLALQKYIK-RDSKNPGGNWTHTLSLW 461
+ TLE FS LT + + VS Y I+ D + P L
Sbjct: 379 LRSLLHTLEIADLADFSPLT-LLANFATLVSTYAKGFTIIIEPFDDRTPTIA-NPILHFS 436
Query: 462 CLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELG---VQFGT--------CLEAPHVI 510
C++ ++ K V E S+I+TSGTLSP++ + L V T CL P +I
Sbjct: 437 CMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMATFTMTLARVCL-CPMII 495
Query: 511 DV--DLQVLTSVISTGPD--------NYPLNASYKTADG-------YKLMEKLCNRWRET 553
D ++S T D N L S DG Y+ ME W E
Sbjct: 496 GRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFTSYQYMESTVASWYEQ 555
Query: 554 GQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTI 613
G + K LF+E + G++ + L+ Y + G
Sbjct: 556 GILENIQRNKLLFIETQDGAETS--VALEKYQEACENG---------------------- 591
Query: 614 ESQENANKKGASFLAVCRGKIVVGIPF-------------PNINDIQVSLKKKYNDTYRS 660
+GA L+V RGK+ GI F P + LK + Y
Sbjct: 592 --------RGAILLSVARGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLE--YLR 641
Query: 661 SKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSI 720
+ + N++ A R Q +GR IR + DYG ++ D+RF R + +W+++ +
Sbjct: 642 DQFQIRENDFLTFDAMRHAAQCVGRAIRGKTDYGLMVFADKRFARADKRGKLPRWIQEHL 701
Query: 721 KQYD---SFDASLEGLKSFFRDV 740
+ + D ++ K F R +
Sbjct: 702 TDSNLNLTVDEGVQVAKYFLRQM 724
>gi|425778625|gb|EKV16743.1| hypothetical protein PDIG_19320 [Penicillium digitatum PHI26]
gi|425784169|gb|EKV21962.1| hypothetical protein PDIP_01290 [Penicillium digitatum Pd1]
Length = 974
Score = 124 bits (311), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 163/672 (24%), Positives = 268/672 (39%), Gaps = 158/672 (23%)
Query: 146 IFYASRTHSQISQVISEYKKTAY---------------------RVPMAVLASRKHYCTN 184
IF+ SRTHSQ+SQ E ++ RV L SRK+ C N
Sbjct: 195 IFFCSRTHSQLSQFAGELRRVTLPSSLPSDLDPESKDDLSKLEERVKHLSLGSRKNLCIN 254
Query: 185 KYVRDKEN---IDEECKLLLGDRNLGCPQFKNVHKVRGHPSL----QKGGCHEVHDIEDL 237
VR N I+E+C L L L + + + + +L + V DIED+
Sbjct: 255 PKVRALANNTEINEKC-LDLQQAGLAADKKCSFIPSKDNEALALEFRDHALATVKDIEDI 313
Query: 238 VNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIED 297
VG+ + C YYA+R + +++V PY ++ R A+ + +KG I+I+DEAHN+ D
Sbjct: 314 AQVGKKLGICPYYASRPVIKHSEIVTLPYQLLLQRSAREALNISVKGHIVIIDEAHNLMD 373
Query: 298 IARDAGSVDIDEDVLLKLQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQ 357
SV + L +L+ + Q+ + L ++ V + R +++A +
Sbjct: 374 AITGIHSVTVS---LNQLRTAIGQLTTYARKFKNKLKGKNRNYVAQVIRLVSSIA----E 426
Query: 358 HFFSC----------------WTGD--------KALRELQEANISRQCFPILLECATKAI 393
H S TG K R LQE+ ++R+ LE + +
Sbjct: 427 HMESISQQNGPLEGSVQTSDLMTGKGVDQINPYKLSRYLQESKLARKV-DGYLESSQQPQ 485
Query: 394 KEATDTESELPHLSGMSVITLEGLFSSLT--YFFSRNGSHVSDYQLALQKYIKRDSKNPG 451
+ ++ +P L + L + S FF ++ V L KY+
Sbjct: 486 PDRPKDKTTVPVLFHIQSFLLPLMNPSEEGRLFFQKSQEDV------LLKYM-------- 531
Query: 452 GNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSEL-----GVQFGTCLEA 506
L+P F+++AE + ++IL GT+SPM+ + + L + GT
Sbjct: 532 ----------LLDPTNHFREIAEDARAVILAGGTMSPMSDYVNYLFSYLPPERLGT-FSY 580
Query: 507 PHVI---DVDLQVLTSVISTGPDNYPL---NASYKTADGYKLMEKLCNRWRE-------- 552
HVI ++ Q LT + ++ N+ D + M LC +
Sbjct: 581 GHVIPKSNLVAQSLTQGLMGNEFDFTYEARNSERMITDLGRTMATLCQVIPDGVVAFFPS 640
Query: 553 -------TGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKRE 605
G W KKP+ P G Q ++ + K ++ + R
Sbjct: 641 YDYLSHVLGVW-----KKPI---PNGNGQSTLNLLER----------KKKIIYESREAMT 682
Query: 606 GNNDLNTIESQENANKKGASFLAVCRGKI---------------VVGIPFPNIND----- 645
+DL ++ + GA L++ GK+ ++G+PFPNI
Sbjct: 683 TTDDLLREYTEAVQSGSGALLLSIVGGKLSEGINFSDNLGRGVFIIGLPFPNIRSPVWQA 742
Query: 646 -IQVSLKKKY-----NDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILL 699
IQ +K Y ++ R + +G ++Y N RA+NQ IGR IRH DY AII++
Sbjct: 743 KIQYLEEKTYKQASGSEPERKAVGKAAGRDFYENSCMRAVNQCIGRAIRHINDYAAIIMI 802
Query: 700 DERFQEERNRAH 711
D R + N H
Sbjct: 803 DRRRNDPFNAKH 814
Score = 55.1 bits (131), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 41/72 (56%), Gaps = 5/72 (6%)
Query: 28 PYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCKLKNQ 87
PY PY QL FM + + L+ DG A+ ESPTGTGKSLSL+C +L W ++ K K
Sbjct: 6 PYTPYEIQLQFMQALYACLE----DGKI-AVFESPTGTGKSLSLICGSLTWLRDHKRKAF 60
Query: 88 LANISHSKPDTE 99
+ + D E
Sbjct: 61 QETVDATGDDNE 72
>gi|74219327|dbj|BAE26794.1| unnamed protein product [Mus musculus]
Length = 760
Score = 124 bits (311), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 186/803 (23%), Positives = 312/803 (38%), Gaps = 165/803 (20%)
Query: 20 VGGIQVEFPYQ-PYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
V G+ V FPY Y Q +M + TLD H +LE P+GTGK++SLL +A+
Sbjct: 5 VDGLLVYFPYDYIYPEQFSYMLELKRTLD-----AKGHGVLEMPSGTGKTVSLLALIVAY 59
Query: 79 QQNCKLK-NQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKN 137
Q+ L+ +L S + P+ E V + F + + +P +++ N
Sbjct: 60 QRAYPLEVTKLIYCSRTVPEIEKVIEERRKLLSFYEQQEGEKLPFLGLALSSR---KNLC 116
Query: 138 VKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEEC 197
+ ++TP F + + H T YVR +
Sbjct: 117 IHPEVTPLRFGKD------------------------VDGKCHSLTASYVRAQYQ----- 147
Query: 198 KLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMAD 257
D +L +F + G G +++++DL +GQ C Y+ AR
Sbjct: 148 ----QDASLPHCRFYEEFDIHGRQMPLPAG---IYNLDDLKALGQRQGWCPYFLARYSIL 200
Query: 258 DAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQ 316
A +V Y Y+++P I + ++ + A+++ DEAHNI+++ D+ SV++ L + Q
Sbjct: 201 HANVVVYSYHYLLDPKIADLVSKELARKAVVVFDEAHNIDNVCIDSMSVNLTRRTLDRCQ 260
Query: 317 MELE----QVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALREL 372
L+ V + Q L + + LV + R+A++A+ H + D+ L+E
Sbjct: 261 SNLDTLQKTVLRIKETDEQRLRDEYRRLVEGL--REASVARETDAHLANPVLPDEVLQEA 318
Query: 373 QEANI-SRQCFPILLECATKAIK-----EATDTESELPHLSGMS---------------- 410
+I + + F L + +K + ES LSG++
Sbjct: 319 VPGSIRTAEHFLGFLRRLLEYVKWRLRVQHVVQESPPAFLSGLAQRVCIQRKPLRFCAER 378
Query: 411 ----VITLE----GLFSSLTYFFSRNGSHVSDYQLALQKYIK-RDSKNPGGNWTHTLSLW 461
+ TLE FS LT + + VS Y I+ D + P L
Sbjct: 379 LRSLLHTLEIADLADFSPLT-LLANFATLVSTYAKGFTIIIEPFDDRTPTIA-NPVLHFS 436
Query: 462 CLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELG---VQFGT--------CLEAPHVI 510
C++ ++ K V E S+I+TSGTLSP++ + L V T CL P +I
Sbjct: 437 CMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMATFTMTLARVCL-CPMII 495
Query: 511 DV--DLQVLTSVISTGPD--------NYPLNASYKTADG-------YKLMEKLCNRWRET 553
D ++S T D N L S DG Y+ ME W E
Sbjct: 496 GRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFTSYQYMESTVASWYEQ 555
Query: 554 GQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTI 613
G + K LF+E + G++ + L+ Y + G
Sbjct: 556 GILENIQRNKLLFIETQDGAETS--VALEKYQEACENG---------------------- 591
Query: 614 ESQENANKKGASFLAVCRGKIVVGIPF-------------PNINDIQVSLKKKYNDTYRS 660
+GA L+V RGK+ GI F P + LK + Y
Sbjct: 592 --------RGAILLSVARGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLE--YLR 641
Query: 661 SKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSI 720
+ + N++ A R Q +GR IR + DYG ++ D+RF R + +W+++ +
Sbjct: 642 DQFQIRENDFLTFDAMRHAAQCVGRAIRGKTDYGLMVFADKRFARADKRGKLPRWIQEHL 701
Query: 721 KQYD---SFDASLEGLKSFFRDV 740
+ + D ++ K F R +
Sbjct: 702 TDSNLNLTVDEGVQVAKYFLRQM 724
>gi|299471115|emb|CBN78973.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 572
Score = 124 bits (310), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 129/287 (44%), Gaps = 54/287 (18%)
Query: 56 HALLESPTGTGKSLSLLCSTLAWQQNCKLKNQLANISHSKPDTEAVTD-PLANGGGFIPE 114
+ALLESPTGTGK+L LL ++LAWQQ +N S P A + P+ + E
Sbjct: 3 NALLESPTGTGKTLCLLTASLAWQQ----RNSAMVASKPAPTQLAYDERPVTDLSRPRHE 58
Query: 115 SQPSTIPPSTNGQTAQVAMNNKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAV 174
QP N + M I YASRTHSQ+ QV +E K T YR +++
Sbjct: 59 QQP-------------YQENKPALAAAMPSVIIYASRTHSQLGQVANELKNTVYRPRLSL 105
Query: 175 LASRKHYCTNKYVRDKENIDEECKLLLGDRNLGCPQFKNVHKVRGH-------------- 220
L SR C ++ V + G +N C + + H
Sbjct: 106 LGSRDQLCVHEEVSQMKG---------GAKNHACSALVKARRCKYHRGTEDMVERAGGGG 156
Query: 221 ---------PSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIIN 271
P Q V DIE+LV++ + C YY R A A+LV PY+Y+++
Sbjct: 157 VVAGGGGSGPPDQS----TVPDIEELVSLAKKHEFCPYYLGRGHAPRAELVLMPYNYLLD 212
Query: 272 PVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQME 318
P R ++++ A++I DEAHN+E +A DA S ++ + Q E
Sbjct: 213 PGTRRGIKINWSNAVVIFDEAHNLESVASDASSFELTSAQIAGAQEE 259
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 40/72 (55%), Gaps = 14/72 (19%)
Query: 460 LWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLT 518
WC P V +D+ L + SII+TSGTLSP++SF +EL + F +E PHVI
Sbjct: 435 FWCFCPGVAMQDLKALGVRSIIVTSGTLSPLSSFGNELRLPFEVQVENPHVI-------- 486
Query: 519 SVISTGPDNYPL 530
GP+ PL
Sbjct: 487 -----GPEQTPL 493
>gi|403341333|gb|EJY69968.1| Regulator of telomere elongation helicase 1 [Oxytricha trifallax]
Length = 1216
Score = 124 bits (310), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 102/341 (29%), Positives = 153/341 (44%), Gaps = 89/341 (26%)
Query: 434 DYQLALQKYIKRDSKN-PGGNWTHT---LSLWCLNPAVVFKDVAELS-LSIILTSGTLSP 488
D++L +++ +KN PG + + L CLNP+ +FK + + + SIILTSGTLSP
Sbjct: 826 DFRLYIEEVTYIANKNVPGRAFEASKKLLGYICLNPSYIFKQLVKKNPRSIILTSGTLSP 885
Query: 489 MNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASY---KTAD------- 538
M+SF+ EL FG LE H ID Q++ SV+ + + N Y K D
Sbjct: 886 MDSFADELRTVFGVQLENQHAIDKS-QLMVSVVQCDFNQHQFNFVYDRRKNYDQIIGLGK 944
Query: 539 ------------------GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIV 580
Y+LM ++ + W + + F E K G ++F+ +
Sbjct: 945 FIQKLEKNIPGGILLFFPSYELMAEIMSIWDQQQILYQRQQ----FKEAKNG--KEFKEI 998
Query: 581 LKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKI------ 634
Y I +G K A + VCRGK+
Sbjct: 999 FDKYLKCIQRG------------------------------KRAMLMCVCRGKLSEGIDF 1028
Query: 635 ---------VVGIPFPNINDIQVSLKKKYND-TYRSSKNL-LSGNEWYCNQAFRALNQAI 683
V+GIP+P +ND +V K++Y D ++ N + G +WY QA R +NQAI
Sbjct: 1029 IDDAARAIFVIGIPYPCVNDPRVVQKQEYLDQKHKEEPNFEIDGGKWYKLQASRTVNQAI 1088
Query: 684 GRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYD 724
GR IRH D+GA+ L DER+ + ISKW++ + YD
Sbjct: 1089 GRVIRHIRDFGAVFLCDERYGGQ--MVEISKWMKDRRRIYD 1127
Score = 89.7 bits (221), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 72/200 (36%), Positives = 102/200 (51%), Gaps = 31/200 (15%)
Query: 21 GGIQVEFPYQ-PYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL--- 76
G IQV FPY+ PY Q ++ ++ L + Q +ALLESPTGTGK+L LL TL
Sbjct: 173 GLIQVHFPYEKPYQCQENYIKSLVKALRKKQ-----NALLESPTGTGKTLCLLSGTLGFL 227
Query: 77 -AWQQNCKLKNQ-------LANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQT 128
A+ N + ++ L +I+ S+PD L N P++ T Q
Sbjct: 228 KAYSDNPSIFDEFDENGKPLKHINSSQPDEPDEEFALDN-----PDAAIELQKQKTQNQD 282
Query: 129 AQVA--MNNKNVKKK------MTPTIFYASRTHSQISQVISEYK-KTAYRVPMAVLASRK 179
+V+ +N+ KK + Y +RTHSQISQVI E K K AY + + LASRK
Sbjct: 283 ERVSSQQDNEEAGKKNYLNQDKRIMVIYCTRTHSQISQVIKEIKNKLAYEINVVPLASRK 342
Query: 180 HYCTNKYVRDKENIDEECKL 199
H C ++E++D+ CKL
Sbjct: 343 HMCIFGEQFEEESVDQVCKL 362
Score = 72.8 bits (177), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 59/102 (57%)
Query: 224 QKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIK 283
QK V+DIEDL VG++ C YY ARS + + PY YI+ P IR + + I+
Sbjct: 512 QKILTQPVYDIEDLNKVGKMHSLCPYYLARSKLSNVDIAVIPYHYILTPSIRRKLPLKIE 571
Query: 284 GAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQVCSV 325
+++I DEAHN+E I + S + D L++ + L+++ +V
Sbjct: 572 NSVIIFDEAHNLERICEEIMSFKLSVDKLIQCEKILQKLETV 613
>gi|444730736|gb|ELW71110.1| TFIIH basal transcription factor complex helicase XPD subunit
[Tupaia chinensis]
Length = 732
Score = 124 bits (310), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 177/785 (22%), Positives = 305/785 (38%), Gaps = 157/785 (20%)
Query: 20 VGGIQVEFPYQ-PYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
V G+ V FPY Y Q +M + TLD H +LE P+GTGK++SLL +A+
Sbjct: 5 VDGLLVYFPYDYIYPEQFSYMLELKRTLD-----AKGHGVLEMPSGTGKTVSLLALIMAY 59
Query: 79 QQNCKLK-NQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKN 137
Q+ L+ +L S + P+ E V + L F + +P +++ N
Sbjct: 60 QRAYPLEVTKLIYCSRTVPEIEKVIEELRKLLNFYEKQDGEKLPFLGLALSSR---KNLC 116
Query: 138 VKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEEC 197
+ ++TP F + + H T YVR +
Sbjct: 117 IHPEVTPLRFGKD------------------------VDGKCHSLTASYVRVQYQ----- 147
Query: 198 KLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMAD 257
D +L +F G G +++++DL +G+ C Y+ AR
Sbjct: 148 ----QDSSLPHCRFYEEFDAHGRQVPLPMG---IYNLDDLKALGRRQGWCPYFLARYSIL 200
Query: 258 DAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQ 316
A +V Y Y+++P I + ++ + A+++ DEAHNI+++ D+ SV++ L + Q
Sbjct: 201 HANVVVYSYHYLLDPKIADLVSKELARKAVVVFDEAHNIDNVCIDSMSVNLTRRTLDRCQ 260
Query: 317 MELE----QVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALREL 372
LE V + Q L E + LV + R+A+ A+ H + D+ L
Sbjct: 261 ANLETLQKTVLRIKETDEQRLREEYRRLVEGL--REASAARETDAHLANPVLPDEW--RL 316
Query: 373 QEANISRQCFPILLECAT-------KAIKEATDTESELPH------LSGMSVITLEGLFS 419
+ ++ ++ P L K ++ + L H L+ S +TL F+
Sbjct: 317 RVQHVVQESPPAFLSSLAQRVCIQRKPLRFCAERLRSLLHTLEIADLADFSPLTLLANFA 376
Query: 420 SLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSI 479
+L ++ + + ++ + D + P L C++ ++ K V S+
Sbjct: 377 TLV------STYAKGFTIIIEPF---DDRTPTIA-NPILHFSCMDASLAIKPVFSRFQSV 426
Query: 480 ILTSGTLSPMNSFSSELG---VQFGT--------CLEAPHVIDV--DLQVLTSVISTGPD 526
I+TSGTLSP++ + L V T CL P +I D ++S T D
Sbjct: 427 IITSGTLSPLDIYPKILDFHPVTMATFTMTLARVCL-CPMIIGRGNDQVAISSKFETRED 485
Query: 527 --------NYPLNASYKTADG-------YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKG 571
N L S DG Y+ ME W E G + K LF+E +
Sbjct: 486 IAVIRNYGNLLLEMSAVVPDGIVAFFTSYQYMESTVASWYEQGILENIQRNKLLFIETQD 545
Query: 572 GSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCR 631
G++ + L+ Y + G +GA L+V R
Sbjct: 546 GAETS--VALEKYQEACENG------------------------------RGAILLSVAR 573
Query: 632 GKIVVGIPF-------------PNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRA 678
GK+ GI F P + LK + Y + + N++ A R
Sbjct: 574 GKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLE--YLRDQFQIRENDFLTFDAMRH 631
Query: 679 LNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYD---SFDASLEGLKS 735
Q +GR IR + DYG ++ D+RF R + +W+++ + + + D ++ K
Sbjct: 632 AAQCVGRAIRGKTDYGLMVFADKRFARADKRGKLPRWIQEHLTDANLNLTVDEGVQVAKY 691
Query: 736 FFRDV 740
F R +
Sbjct: 692 FLRQM 696
>gi|320593951|gb|EFX06354.1| tfiih complex helicase [Grosmannia clavigera kw1407]
Length = 793
Score = 124 bits (310), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 179/809 (22%), Positives = 326/809 (40%), Gaps = 176/809 (21%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+++ + + FPY + Y +MC + TLD GHC +LE P+GTGK++SLL +
Sbjct: 3 FNIDDLPILFPYPRIYPVSNSYMCDLKRTLDAT---GHC--VLEMPSGTGKTVSLLSLIV 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNK 136
A+QQ + +L S + + E L K
Sbjct: 58 AYQQYYPGQRKLIYCSRTMSEIEKALAEL------------------------------K 87
Query: 137 NVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKEN---I 193
+ K T + Y E++ L SRK+ C + V+ +++ +
Sbjct: 88 ALMKYRTQELGYE-----------EEFRGLG-------LTSRKNLCLHPSVKREKSGSVV 129
Query: 194 DEECKLLLG-----------DRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQ 242
D C+ L D N+ C N+ K+ H + G V ++ L+ G+
Sbjct: 130 DARCRSLTAGFVIEKKERGEDVNV-CIYHDNLDKLEPHNLIPNG----VWTLDGLLRYGE 184
Query: 243 VVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARD 301
+ C Y+ +R M ++ Y Y+++P I + ++ K I++ DEAHNI+++ +
Sbjct: 185 EHKQCPYFTSRRMMQFCNVIIYSYHYLLDPKIAERVSKELSKDCIVVFDEAHNIDNVCIE 244
Query: 302 AGSVDIDEDVLLK----LQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQ 357
+ S DI ED L K Q +++ + + L Q LV + R+A A++E
Sbjct: 245 SLSTDITEDSLRKATRGAQNLEKKINEMRETDQKQLENEYQKLVQGL--READEARQEDA 302
Query: 358 HFFSCWTGDKALRELQEANISR--------QCFPILLECATKAIKEATDT-ESELPHLSG 408
+ + L+E NI R + F L+ K + ++T S L HL
Sbjct: 303 FMTNPTLPEDLLKEAVPGNIRRAEHFVAFLKRFIEYLKTRMKVRQVISETPPSFLAHLKE 362
Query: 409 MSVIT----------LEGLFSSL--------------TYFFSRNGSHVSDYQLALQKYIK 444
+ I L L +L F + ++ + L L+ +
Sbjct: 363 YTFIEKKPLRFCAERLASLVRTLELTNIEDYQPLREVATFATLVATYEKGFLLILEPFES 422
Query: 445 RDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCL 504
++ P L CL+ A+ K V E S+I+TSGT+SP+ + LG F T +
Sbjct: 423 DTAEVPNP----VLHFTCLDAAIAIKPVFERFSSVIITSGTISPLEMYPKMLG--FNTVV 476
Query: 505 EAPHVIDVDLQ-VLTSVISTGPDNYPLNASYK---------------------TADG--- 539
+ + + + + L +++ G D ++ S++ T DG
Sbjct: 477 QESYTMTLARRSFLPMIVTRGSDQAAMSTSFQVRNEPSVVRNYGTLLTEFAKITPDGLVV 536
Query: 540 ----YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCA 595
Y ME + + W+ G + K + VE ++ + L+ Y + G
Sbjct: 537 FFPSYLYMESIISMWQGMGILDEVWKYKLILVETPDA--QETSLALETYRTACCNGRGAI 594
Query: 596 VVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKY- 654
++ R K D + ++ G + L+ +G+PF + + ++
Sbjct: 595 LLCVARGKVSEGIDFD--------HQYGRTVLS-------MGVPFQYTESRILKARLEFL 639
Query: 655 NDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISK 714
+TYR + N++ A R Q +GR +R + DYG ++L D R+Q++RN + K
Sbjct: 640 RETYR-----IRENDFLSFDAMRHAAQCLGRVLRGKDDYGIMVLADRRYQKKRN--QLPK 692
Query: 715 WLRKSIKQYD---SFDASLEGLKSFFRDV 740
W+ +++ + D S D ++ K F RD+
Sbjct: 693 WINQALLEADANLSTDMAVSNAKKFLRDM 721
>gi|345785629|ref|XP_541562.3| PREDICTED: LOW QUALITY PROTEIN: TFIIH basal transcription factor
complex helicase XPD subunit [Canis lupus familiaris]
Length = 760
Score = 123 bits (309), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 189/803 (23%), Positives = 310/803 (38%), Gaps = 165/803 (20%)
Query: 20 VGGIQVEFPYQ-PYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
V G+ V FPY Y Q +M + TLD H +LE P+GTGK++SLL +A+
Sbjct: 5 VDGLLVYFPYDYIYPEQFSYMLELKRTLD-----AKGHGVLEMPSGTGKTVSLLALIMAY 59
Query: 79 QQNCKLK-NQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKN 137
Q+ L+ +L S + P+ E V + L F + + +P +++ N
Sbjct: 60 QRAYPLEVTKLIYCSRTVPEIEKVIEELRKLLNFYEKQEGEKLPFLGLALSSR---KNLC 116
Query: 138 VKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEEC 197
+ ++ P F + + H T YVR +
Sbjct: 117 IHPEVMPLRFGKD------------------------VDGKCHSLTASYVRAQYQ----- 147
Query: 198 KLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMAD 257
D +L +F V G G +++++DL +GQ C Y+ AR
Sbjct: 148 ----QDSSLPHCRFYEEFDVHGRQVPLPAG---IYNLDDLKALGQRQGWCPYFLARYSIL 200
Query: 258 DAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQ 316
A +V Y Y+++P I + ++ + A+++ DEAHNI+++ D+ SV+I L + Q
Sbjct: 201 HANVVVYSYHYLLDPKIAELVSKELARKAVVVFDEAHNIDNVCIDSMSVNITRRTLDRCQ 260
Query: 317 MELE----QVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALREL 372
LE V + Q L E + LV + R+A+ A+ H + D+ L+E
Sbjct: 261 GNLETLQKTVLRIKETDEQRLREEYRRLVEGL--REASAARETDAHLANPVLPDEVLQEA 318
Query: 373 QEANI-SRQCFPILLECATKAIK-----EATDTESELPHLSGMS---------------- 410
+I + + F L + +K + ES LSG++
Sbjct: 319 VPGSIRTAEHFLGFLRRLLEYVKWRLRVQHVVQESPPAFLSGLAQRVCIQRKPLRFCAER 378
Query: 411 ----VITLE----GLFSSLTYFFSRNGSHVSDYQLALQKYIK-RDSKNPGGNWTHTLSLW 461
+ TLE FS LT + + VS Y I+ D + P L
Sbjct: 379 LRSLLHTLEIADLADFSPLT-LLANFATLVSTYAKGFTIIIEPFDDRTPTIA-NPILHFS 436
Query: 462 CLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELG---VQFGT--------CLEAPHVI 510
C++ ++ K V E S+I+TSGTLSP++ + L V T CL P +I
Sbjct: 437 CMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMATFTMTLARVCL-CPMII 495
Query: 511 DV--DLQVLTSVISTGPD--------NYPLNASYKTADG-------YKLMEKLCNRWRET 553
D ++S T D N L S DG Y+ ME W E
Sbjct: 496 GRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFTSYQYMESTVASWYEQ 555
Query: 554 GQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTI 613
G + K LF+E + G++ + L+ Y + G
Sbjct: 556 GILENIQRNKLLFIETQDGAETS--VALEKYQEACENG---------------------- 591
Query: 614 ESQENANKKGASFLAVCRGKIVVGIPF-------------PNINDIQVSLKKKYNDTYRS 660
+GA L+V RGK+ GI F P + LK + Y
Sbjct: 592 --------RGAILLSVARGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLE--YLR 641
Query: 661 SKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSI 720
+ + N++ A R Q +G IR + DYG ++ D+RF R + +W+++ +
Sbjct: 642 DQFQIRXNDFLTLDAMRHAAQCVGGAIRGKTDYGLMVFADKRFARADKRGKLPRWIQEHL 701
Query: 721 KQYD---SFDASLEGLKSFFRDV 740
+ + D ++ K F R +
Sbjct: 702 TDANLNLTVDEGVQVAKYFLRQM 724
>gi|443898496|dbj|GAC75831.1| RNA polymerase II transcription initiation/nucleotide excision
repair factor TFIIH, 5'-3' helicase subunit RAD3
[Pseudozyma antarctica T-34]
Length = 851
Score = 123 bits (309), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 170/799 (21%), Positives = 314/799 (39%), Gaps = 158/799 (19%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+++ + V FPY + Y Q +M + TLD +GHC +LE P+GTGK++SL +
Sbjct: 3 FYIDELPVLFPYPKIYPEQYAYMTDLKRTLDA---NGHC--VLEMPSGTGKTVSLFSLIV 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGF-----IPESQPSTIPPSTNGQTAQV 131
++Q K +L S + P+ E L + +PE + S + S T
Sbjct: 58 SYQLFHPAKRKLIYCSRTVPEIEKALAELKRLMEYRARYNVPEGEESHVAKSDADGTNGP 117
Query: 132 AMNNKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYV---R 188
A ++ +K + + Q+ +++ L+SRK+ C + V R
Sbjct: 118 ADDDIEMKGR--------GKAGGQMEDILA-----------LGLSSRKNLCIHPDVGRER 158
Query: 189 DKENIDEECKLLL-------GDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVG 241
+ +D C+ + G ++ G Q + H+ G + V +E++
Sbjct: 159 KGKVVDARCRDMTSSWACEKGRQDPGSVQLCDFHEELGKMEPGQLIPQGVWTLEEVKEYA 218
Query: 242 QVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIAR 300
+V C Y+A R M ++ + Y+++P I + ++ K AI++ DEAHNI+++
Sbjct: 219 RVKGICPYFAIRRMIPFVDIIVYSFHYLLDPKIAEQVSKEMSKDAIVVFDEAHNIDNVCI 278
Query: 301 DAGSVDIDEDVLLKLQMELEQVCS-VNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHF 359
++ S+D+ +L + Q+ V+ + ++ + +E + +RE + F
Sbjct: 279 ESLSIDLTRPMLDSAYRSINQLSERVDEIKRTDASKLQDEYARLVEGLQEQGEQREAESF 338
Query: 360 FS-CWTGDKALRELQEANISR-QCFPILLECATKAIKE--------ATDTESELPHLSGM 409
+ D L+E NI R + F L+ + +K A S L HL +
Sbjct: 339 MANPVLPDDLLQEAVPGNIRRAEHFVAFLKRFVEYLKTRMRVLHVVAETPASFLQHLKDI 398
Query: 410 SVI-----------------TLE-------GLFSSLTYFFSRNGSHVSDYQLALQKYIKR 445
+ I TLE + F + ++ + L L+ +
Sbjct: 399 TYIERKPLRFCAERLRMLVGTLELTRLDEYSALQKVAAFATLVATYDKGFLLILEPFETE 458
Query: 446 DSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLE 505
++ P + T CL+ ++ V E S+I+TSGT+SP++ + L +F ++
Sbjct: 459 NATVPNPIFHFT----CLDASLAIAPVFERFSSVIITSGTISPLDMYPKML--KFDAIVQ 512
Query: 506 APHVIDVDLQ-VLTSVISTGPDNYPLNASYK---------------------TADG---- 539
+ + + Q L VI+ G D +++ ++ DG
Sbjct: 513 ESYAMTLTRQCFLPLVITRGSDQVAISSRFEVRNDPAVVRNYGSILIEYAKCVPDGIVAF 572
Query: 540 ---YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAV 596
Y ME + W + G + K +F+E + I L++Y + G
Sbjct: 573 FPSYLYMESIVAAWHDMGILDEVWKYKLIFIETPDAPETS--IALENYRRACDNG----- 625
Query: 597 VRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFP-NINDIQVSLKKKYN 655
+GA L+V RGK+ GI F N + Y
Sbjct: 626 -------------------------RGAILLSVARGKVSEGIDFDHNYGRAVIMFGVPYQ 660
Query: 656 DTYRSSKNL------------LSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERF 703
Y S+ L + N++ A R Q +GR +R + DYG ++ D+RF
Sbjct: 661 --YTESRILKARLEFLRDNFRIRENDFLTFDAMRHAAQCVGRVLRGKTDYGLMVFADKRF 718
Query: 704 QEERNRAHISKWLRKSIKQ 722
R + KW+ + IK+
Sbjct: 719 ARADKRNKLPKWIAQYIKE 737
>gi|391337444|ref|XP_003743078.1| PREDICTED: Fanconi anemia group J protein-like [Metaseiulus
occidentalis]
Length = 313
Score = 123 bits (309), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 105/183 (57%), Gaps = 27/183 (14%)
Query: 543 MEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSIS-QGSKCAVVRKKR 601
M KL +RW TG W+RL K +FVE K Q+ E ++Y +S++ QGS V + R
Sbjct: 1 MNKLKDRWGMTGIWNRLEQAKRIFVEGKMNLQQQME---EYYASSVTAQGSLLLAVCRGR 57
Query: 602 VKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYNDTYRSS 661
V EG + + R ++VGIPFPN+ ++ V K K+NDT S
Sbjct: 58 VS-EGEDFPDNF----------------ARAVVIVGIPFPNVREVTVGDKMKFNDT--RS 98
Query: 662 KNL---LSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERN-RAHISKWLR 717
K++ +SG+EWY QAFRALNQA+GRCIRH D+GAIILL+ R R + +S+W+R
Sbjct: 99 KDIDAVMSGSEWYKTQAFRALNQALGRCIRHSKDWGAIILLESRVATYRGYKEMLSRWVR 158
Query: 718 KSI 720
+
Sbjct: 159 DRL 161
>gi|378732396|gb|EHY58855.1| DNA repair helicase rad15 [Exophiala dermatitidis NIH/UT8656]
Length = 819
Score = 123 bits (309), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 190/887 (21%), Positives = 346/887 (39%), Gaps = 184/887 (20%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+ + + V FPY + Y Q +MC + TLD GHC +LE P+GTGK++SLL +
Sbjct: 3 FFIDDLPVLFPYPRIYPEQYAYMCDLKRTLDAG---GHC--VLEMPSGTGKTVSLLSLIV 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNK 136
A+QQ+ +L S + + E L + + G T++ K
Sbjct: 58 AYQQHYPEHRKLIYCSRTMSEIEKALAELKALMKYRSDQLGYVEDFRGLGLTSR-----K 112
Query: 137 NVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE 196
N+ + P++ R S AV+ +R T +V++K+ E+
Sbjct: 113 NL--CLHPSV---KREKSG-----------------AVVDARCRSLTAGFVKEKKERGED 150
Query: 197 CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMA 256
++ C N+ + H + G V ++ L+ G+ + C Y++AR M
Sbjct: 151 VEV--------CVYHDNLDLLEPHNLVPPG----VFTLDGLIRYGEEHKQCPYFSARRMM 198
Query: 257 DDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLK- 314
++ Y Y+++P I + ++ K I++ DEAHNI+++ ++ S+D+ ED L K
Sbjct: 199 PFCNVIIYSYHYLLDPKIAERVSKELSKDCIVVFDEAHNIDNVCIESLSIDLTEDSLRKA 258
Query: 315 ------LQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKA 368
L+ ++E++ + + + L Q LV + R+A A+ E + D
Sbjct: 259 TRGANNLERKIEEMKASDE---EKLQNEYQKLVEGL--READEARAEDAFMSNPTLPDDL 313
Query: 369 LRELQEANISR--------QCFPILLECATKAIKEATDT-ESELPHLSGMSVITLEGL-- 417
L+E NI R + F L+ K + +T S L HL ++ I + L
Sbjct: 314 LKEAVPGNIRRAEHFVAFLKRFIEYLKTRMKVLYVIQETPPSFLSHLKELTFIERKPLRF 373
Query: 418 ----------------------FSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWT 455
+ F + ++ + + L L+ + + P
Sbjct: 374 CAERLTSLVRTLELTNIEDYQPLQEVATFATLVATYETGFLLILEPFETEQATVPNP--- 430
Query: 456 HTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQ 515
L CL+ ++ K V E S+I+TSGT+SP+ + L F T L+ + + + +
Sbjct: 431 -ILHFACLDASIAIKPVFERFSSVIITSGTISPLEMYPKML--NFSTVLQESYPMSLARR 487
Query: 516 -VLTSVISTGPDNYPLNASYK---------------------TADG-------YKLMEKL 546
L +++ G D + + ++ T DG Y ME +
Sbjct: 488 SFLPMIVTRGSDQQSITSGFQSRSDPGVVRNYGALLFEFAKITPDGIVVFFPSYLYMEMI 547
Query: 547 CNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREG 606
+ W+ G ++ K + VE + + L+ Y + G
Sbjct: 548 ISMWQGMGILDQIWTYKLILVETPDAQETS--LALETYRTACENG--------------- 590
Query: 607 NNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPN-----INDIQVSLKKKYNDTYRSS 661
KGA L V RGK+ GI F + + + + + ++
Sbjct: 591 ---------------KGAILLCVARGKVSEGIDFDHHFGRTVLCMGAPFQYTESRILKAR 635
Query: 662 KNLLSGN------EWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKW 715
L N ++ A R Q +GR +R + DYG ++L D RFQ++RN+ + +W
Sbjct: 636 LEFLRENYRIKEQDFLSFDAMRHAAQCLGRVLRGKDDYGIMVLADRRFQKKRNQ--LPRW 693
Query: 716 LRKSIKQYD---SFDASLEGLKSFFRDVKGWVGKKMFNGLENSDNDVDHVSSMDQCKEVT 772
+ + I S DA++ K F R + +G G + D S D KE+
Sbjct: 694 IAEEIHDGQTGLSTDAAVGMAKKFLRSIAQPLG----TGQKAPDGSTKGKDSWD-LKEL- 747
Query: 773 KQNTQELNKSDHSGQNVQSISKYDPFSHQKSQGNFEVQTSLQTDQNN 819
++ + + + ++D +SH T +Q N
Sbjct: 748 ----EQFQREQKARRGEGDFGRHDAYSHDYLNSAVNTTTQVQNGTNG 790
>gi|355703655|gb|EHH30146.1| hypothetical protein EGK_10751 [Macaca mulatta]
Length = 760
Score = 123 bits (309), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 187/803 (23%), Positives = 311/803 (38%), Gaps = 165/803 (20%)
Query: 20 VGGIQVEFPYQ-PYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
V G+ V FPY Y Q +M + TLD H +LE P+GTGK++SLL +A+
Sbjct: 5 VDGLLVYFPYDYIYPEQFSYMRELKRTLD-----AKGHGVLEMPSGTGKTVSLLALIMAY 59
Query: 79 QQNCKLK-NQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKN 137
Q+ L+ +L S + P+ E V + L F + + +P +++ N
Sbjct: 60 QRAYPLEVTKLIYCSRTVPEIEKVIEELRKLLNFYEKQEGEKLPFLGLALSSR---KNLC 116
Query: 138 VKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEEC 197
+ ++TP F + + H T YVR +
Sbjct: 117 IHPEVTPLRFGKD------------------------VDGKCHSLTASYVRAQYQ----- 147
Query: 198 KLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMAD 257
D +L +F G G +++++DL +G+ C Y+ AR
Sbjct: 148 ----HDTSLPHCRFYEEFDAHGREVPLPAG---IYNLDDLKALGRRQGWCPYFLARYSIL 200
Query: 258 DAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQ 316
A +V Y Y+++P I + ++ + A+++ DEAHNI+++ D+ SV++ L + Q
Sbjct: 201 HANVVVYSYHYLLDPKIADLVSKELARKAVVVFDEAHNIDNVCIDSMSVNLTRRTLDRCQ 260
Query: 317 MELE----QVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALREL 372
LE V + Q L + + LV + R+A+ A+ H + D+ L+E
Sbjct: 261 GNLETLQKTVLRIKETDEQRLRDEYRRLVEGL--REASAARETDAHLANPVLPDEVLQEA 318
Query: 373 QEANI-SRQCFPILLECATKAIK-----EATDTESELPHLSGMS---------------- 410
+I + + F L + +K + ES LSG++
Sbjct: 319 VPGSIRTAEHFLGFLRRLLEYVKWRLRVQPVVQESPASFLSGLAQRVCIQRKPLRFCAER 378
Query: 411 ----VITLE----GLFSSLTYFFSRNGSHVSDYQLALQKYIK-RDSKNPGGNWTHTLSLW 461
+ TLE FS LT + + VS Y I+ D + P L
Sbjct: 379 LRSLLHTLEITDLADFSPLT-LLANFATLVSTYAKGFTIIIEPFDDRTPTIA-NPILHFS 436
Query: 462 CLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELG---VQFGT--------CLEAPHVI 510
C++ ++ K V E S+I+TSGTLSP++ + L V T CL P +I
Sbjct: 437 CMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMATFTMTLARVCL-CPMII 495
Query: 511 DV--DLQVLTSVISTGPD--------NYPLNASYKTADG-------YKLMEKLCNRWRET 553
D ++S T D N L S DG Y+ ME W E
Sbjct: 496 GRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFTSYQYMESTVASWYEQ 555
Query: 554 GQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTI 613
G + K LF+E + G++ + L+ Y + G
Sbjct: 556 GILENIQRNKLLFIETQDGAETS--VALEKYQEACENG---------------------- 591
Query: 614 ESQENANKKGASFLAVCRGKIVVGIPF-------------PNINDIQVSLKKKYNDTYRS 660
+GA L+V RGK+ GI F P + LK + Y
Sbjct: 592 --------RGAILLSVARGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLE--YLR 641
Query: 661 SKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSI 720
+ + N++ A R Q +GR IR + DYG ++ D+RF R + +W+++ +
Sbjct: 642 DQFQIRENDFLTFDAMRHAAQCVGRAIRGKTDYGLMVFADKRFARGDKRGKLPRWIQEHL 701
Query: 721 KQYD---SFDASLEGLKSFFRDV 740
+ + D ++ K F R +
Sbjct: 702 TDANLNLTVDEGVQVAKYFLRQM 724
>gi|338710190|ref|XP_001500524.3| PREDICTED: LOW QUALITY PROTEIN: TFIIH basal transcription factor
complex helicase XPD subunit-like [Equus caballus]
Length = 785
Score = 123 bits (309), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 191/809 (23%), Positives = 315/809 (38%), Gaps = 168/809 (20%)
Query: 14 PLNAYHVGGIQVEFPYQ-PYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLL 72
P +V G+ V FPY Y Q +M + TLD H +LE P+GTGK++SLL
Sbjct: 27 PAGRLNVDGLLVYFPYDYIYPEQFSYMLELKRTLD-----AKGHGVLEMPSGTGKTVSLL 81
Query: 73 CSTLAWQQNCKLK-NQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQV 131
+A+Q+ L+ +L S + P+ E V + L F + + + Q +
Sbjct: 82 ALIMAYQRAYPLEVTKLIYCSRTVPEIEKVIEELRKLLNFYEKQEGEKL------QFLGL 135
Query: 132 AMNNKN---VKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVR 188
A++++ + ++TP F + + H T YVR
Sbjct: 136 ALSSRKNLCIHPEVTPLRFGKD------------------------VDGKCHSLTASYVR 171
Query: 189 DKENIDEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCS 248
+ D +L +F G G +++++DL VG+ C
Sbjct: 172 AQHQ---------QDASLPHCRFYEEFDTHGRQVPLPSG---IYNLDDLKAVGRRQGWCP 219
Query: 249 YYAARSMADDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDI 307
Y+ AR A +V Y Y+++P I + ++ + A+++ DEAHNI+++ D+ SV I
Sbjct: 220 YFLARYSILHANVVVYSYHYLLDPKIADLVSKELARKAVVVFDEAHNIDNVCIDSMSVTI 279
Query: 308 DEDVLLKLQMELEQVC-SVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGD 366
L + Q LE + +V Q L + + LV + R+A+ A+ H + D
Sbjct: 280 TRRTLDRCQGNLETLQKTVLRADEQRLRDEYRRLVEGL--REASAARETDAHLANPVLPD 337
Query: 367 KALRELQEANI-SRQCFPILLECATKAIK-----EATDTESELPHLSGMS---------- 410
+ L+E +I + + F L + +K + ES LSG++
Sbjct: 338 EVLQEAVPGSIRTAEHFLGFLRRLLEYVKXRLRVQHVVQESPPAFLSGLAQRVCIQYKIL 397
Query: 411 ----------VITLE----GLFSSLTYFFSRNGSHVSDYQLALQKYIK-RDSKNPGGNWT 455
+ TLE FS LT + + VS Y I+ D + P
Sbjct: 398 RFCAERLRSLLHTLEIADLADFSPLT-LLANFATLVSTYAKGFTIIIEPFDDRTPTIA-N 455
Query: 456 HTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELG---VQFGT--------CL 504
L C++ ++ K V E S+I+TSGTLSP++ + L V T CL
Sbjct: 456 PILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMATFTMTLARVCL 515
Query: 505 EAPHVIDV--DLQVLTSVISTGPD--------NYPLNASYKTADG-------YKLMEKLC 547
P +I D ++S T D N L S DG Y+ ME
Sbjct: 516 -CPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFTSYQYMESTV 574
Query: 548 NRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGN 607
W E G + K LF+E + G++ + L+ Y + G
Sbjct: 575 ASWYEQGILENIQRNKLLFIETQDGAETS--VALEKYQEACENG---------------- 616
Query: 608 NDLNTIESQENANKKGASFLAVCRGKIVVGIPF-------------PNINDIQVSLKKKY 654
+GA L+V RGK+ GI F P + LK +
Sbjct: 617 --------------RGAILLSVARGKVSEGIDFVHHYGRAVLMFGVPYVYTQSRILKARL 662
Query: 655 NDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISK 714
Y + + N++ A R Q +GR IR + DYG +I D+RF R + +
Sbjct: 663 E--YLRDQFQIRENDFLTFDAMRHAAQCVGRAIRGKTDYGLMIFADKRFARADKRGKLPR 720
Query: 715 WLRKSIKQYD---SFDASLEGLKSFFRDV 740
W+++ + + + D ++ K F R +
Sbjct: 721 WIQEHLTDANLNLTVDEGVQVAKYFLRQM 749
>gi|58264204|ref|XP_569258.1| CHL1 helicase [Cryptococcus neoformans var. neoformans JEC21]
gi|57223908|gb|AAW41951.1| CHL1 helicase, putative [Cryptococcus neoformans var. neoformans
JEC21]
Length = 849
Score = 123 bits (308), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 93/326 (28%), Positives = 142/326 (43%), Gaps = 69/326 (21%)
Query: 463 LNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFG----TCLEAPHVIDVDLQVLT 518
LNP+ FK+V E + S+IL GT+ P+ F +L + L HVI + +LT
Sbjct: 541 LNPSERFKEVVEEARSVILAGGTMEPITDFLQQLFPSIPKDRLSTLSCSHVIPKE-NLLT 599
Query: 519 SVISTGPDNYPLNASYK---------------------TADG-------YKLMEKLCNRW 550
V+S GP + DG Y ++K+ W
Sbjct: 600 QVVSVGPRKSEFEFKFGNRNDEALLTDLGAVLQATIGVVPDGVVVFLPSYAFLDKVRAFW 659
Query: 551 RETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDL 610
++G RL +K LF EP+ + D E +L+ Y +IS C
Sbjct: 660 TKSGLLQRLGERKQLFYEPQ--TSGDVETILRDYALAISS---CYA-------------- 700
Query: 611 NTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKKYN 655
T S + + K GA AV GK I+VG+PF N++ +++ + +Y
Sbjct: 701 -TSTSGQKSRKTGALMFAVVGGKLSEGINFSDNLGRCVIMVGLPFANVSSVELQERMRYV 759
Query: 656 DTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKW 715
+T + S E Y N RA+NQ+IGR IRH DY I+L+D+R+ R R + KW
Sbjct: 760 ETVPGAGQGAS-REMYENLCMRAVNQSIGRAIRHANDYATILLVDKRYATSRIRNKLPKW 818
Query: 716 LRKSIKQYDSFDASLEGLKSFFRDVK 741
+ K +K F G+ +FF++ K
Sbjct: 819 IGKDVKVPQDFGGVARGVAAFFKEKK 844
Score = 70.9 bits (172), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 77/173 (44%), Gaps = 28/173 (16%)
Query: 146 IFYASRTHSQISQVISEYKKTAYR-----------------VPMAVLASRKHYCTNKYVR 188
++Y SRTH+Q+ Q+ SE KT++ V + L SRK C N+ VR
Sbjct: 190 VYYTSRTHTQLRQLTSELLKTSFASYDSVPESSSAEAPSHGVSLVPLGSRKQLCINEKVR 249
Query: 189 D--KENIDEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGC--HEVHDIEDLVNVGQVV 244
+ DE N C + K L V DIED+V +G+
Sbjct: 250 ALARNGGDERM-------NEACLDMQKSAKADEITMLDARDTILASVKDIEDIVTMGKKS 302
Query: 245 RGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIED 297
C YYA R +Q+V PY+ ++ A+ + +K ++++DEAHN+ D
Sbjct: 303 CVCPYYATRKAVKQSQIVTLPYNLLLQKNSHEALGIKLKNQVVVIDEAHNLID 355
>gi|134107760|ref|XP_777491.1| hypothetical protein CNBB0650 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260183|gb|EAL22844.1| hypothetical protein CNBB0650 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 883
Score = 123 bits (308), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 141/321 (43%), Gaps = 64/321 (19%)
Query: 463 LNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFG----TCLEAPHVIDVDLQVLT 518
LNP+ FK+V E + S+IL GT+ P+ F +L + L HVI + +LT
Sbjct: 580 LNPSERFKEVVEEARSVILAGGTMEPITDFLQQLFPSIPKDRLSTLSCSHVIP-KVNLLT 638
Query: 519 SVISTGPDNYPLNASYK---------------------TADG-------YKLMEKLCNRW 550
V+S GP + DG Y ++K+ W
Sbjct: 639 QVVSVGPRKSEFEFKFGNRNDEALLTDLGAVLQATIGVVPDGVVVFLPSYAFLDKVRAFW 698
Query: 551 RETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDL 610
++G RL +K LF EP+ + D E +L+ Y +IS C
Sbjct: 699 TKSGLLQRLGERKQLFYEPQ--TSGDVETILRDYALAISS---CYA-------------- 739
Query: 611 NTIESQENANKKGASFLAVCRG----------KIVVGIPFPNINDIQVSLKKKYNDTYRS 660
T S + + K GA AV G I+VG+PF N++ +++ + +Y +T
Sbjct: 740 -TSTSGQKSRKTGALMFAVVGGINFSDNLGRCVIMVGLPFANVSSVELQERMRYVETVPG 798
Query: 661 SKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSI 720
+ S E Y N RA+NQ+IGR IRH DY I+L+D+R+ R R + KW+ K +
Sbjct: 799 AGQGAS-REMYENLCMRAVNQSIGRAIRHANDYATILLVDKRYATSRIRNKLPKWIGKDV 857
Query: 721 KQYDSFDASLEGLKSFFRDVK 741
K F G+ +FF++ K
Sbjct: 858 KVPQDFGGVARGVAAFFKEKK 878
Score = 76.6 bits (187), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 79/178 (44%), Gaps = 23/178 (12%)
Query: 143 TPTIFYASRTHSQISQVISEYKKTAYR-----------------VPMAVLASRKHYCTNK 185
P ++Y SRTH+Q+ Q+ SE KT++ V + L SRK C N+
Sbjct: 217 APKVYYTSRTHTQLRQLTSELLKTSFASYDSVPESSSAEAPSHGVSLVPLGSRKQLCINE 276
Query: 186 YVR------DKENIDEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVN 239
VR E ++E C + C + V DIED+V
Sbjct: 277 KVRALARNGGDERMNEACLDMQKSGKARCEFLPAKADEITMLDARDTILASVKDIEDIVT 336
Query: 240 VGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIED 297
+G+ C YYA R +Q+V PY+ ++ R A+ + +K ++++DEAHN+ D
Sbjct: 337 MGKKSCVCPYYATRKAVKQSQIVTLPYNLLLQKNSREALGIKLKNQVVVIDEAHNLID 394
>gi|42601324|gb|AAS21351.1| helicase-like protein NHL-like protein [Oikopleura dioica]
Length = 1016
Score = 123 bits (308), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 107/379 (28%), Positives = 158/379 (41%), Gaps = 118/379 (31%)
Query: 13 KPLNAYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLL 72
K LN Y G+ V FPY PY +Q ++ + + L +R+ HA+LESPTGTGK+L LL
Sbjct: 5 KTLNFY---GVDVRFPYDPYPAQEEYIKKCVEAL--VKRN---HAVLESPTGTGKTLCLL 56
Query: 73 CSTLAWQQNCKLKNQLANISHSKPDTEAVTDPLAN--GGGFIPESQPSTIPPSTNGQTAQ 130
S +A+++ K +P N GG ES
Sbjct: 57 ASVIAYREWAK------------------RNPPKNKYGGSLGTES--------------- 83
Query: 131 VAMNNKNVKKKMTPTIFYASRTHSQISQVISEYKKT----AYRVPMAVLASRKHYCTNKY 186
P I YASRTHSQ++QV+SE +K Y V M V+ R C +
Sbjct: 84 ------------IPKIIYASRTHSQLTQVVSELRKLRDVCGYNVDMTVVGGRSSLCVDLT 131
Query: 187 VRDKENIDEE---CKLLLGDRNLGCPQFKNVHKVRG------------------------ 219
V+ N E+ C+ L + GC K K+ G
Sbjct: 132 VKKITNNSEQQNACRALRNGKT-GCAHKKEADKLSGIAHSRPSTSTAPKSQPSKSLPFGS 190
Query: 220 ---HPSLQKG-----------------GCHEVHDIEDLV----NVGQVVRGCS-----YY 250
P L K G H++ DIE+LV N + CS YY
Sbjct: 191 PKNAPDLLKAAQEEAKRKQNQELISSSGVHDIMDIEELVSWCENPPPQIPDCSTAICGYY 250
Query: 251 AARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGS--VDID 308
+RS AD +++ PY+YI++ IR + K ILILDEAHN+E + ++ S + +
Sbjct: 251 LSRSKADTVEILLMPYNYILDKKIRQRNSFEFKNKILILDEAHNVEQVCEESSSHYISLK 310
Query: 309 EDVLLKLQMELEQVCSVNP 327
+ ++ ++ + + NP
Sbjct: 311 KLEIISKELAMSKASVTNP 329
Score = 114 bits (284), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 131/287 (45%), Gaps = 60/287 (20%)
Query: 458 LSLWCLNPAVVFKDV---AELSLSIILTSGTLSPMNSFSSELGVQFGTCLEA-----PHV 509
+ +WC N + D+ AE ++ILTSGTLSP++ + + LG+ T L+ HV
Sbjct: 466 IKIWCFNASYSIDDITQGAEGVYNLILTSGTLSPLDEYINSLGLDRPTQLKTIQLMNDHV 525
Query: 510 IDVDLQVLTSVISTGPDNYPLNASYKTADGYKLMEKLCNRWRETGQWSRLNAKKPLFVEP 569
ID +T++ TG + ++ + EK R+ + V P
Sbjct: 526 IDSKQLFVTTL--TGTKGAEFHNVFRNRQDKNMFEKYAEVMRDMKE-----------VSP 572
Query: 570 KGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRV----------------KREGNNDLNTI 613
G +V Y ++ K + KK K+E N +
Sbjct: 573 GG------MLVFHPTYALMAISKKFWGLHKKSATFKNSFNVPVFLEPSNKKELENMTESF 626
Query: 614 ESQ-ENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKKYNDT 657
E + N + GA F VCRGK ++ GIP+P D +V LKK+Y D
Sbjct: 627 ERELVNDEETGAIFNGVCRGKMSEGVDFADCRGRVVVITGIPYPPAKDPKVMLKKEYLDN 686
Query: 658 YR-SSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERF 703
+ + K ++ GN+WY +A RA+NQA+GR IRH+ D+GAII +D+RF
Sbjct: 687 RKKTGKGIIDGNKWYGIEAIRAINQAVGRIIRHKNDFGAIIYMDKRF 733
>gi|403299021|ref|XP_003940291.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit isoform 1 [Saimiri boliviensis boliviensis]
Length = 782
Score = 122 bits (307), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 186/809 (22%), Positives = 314/809 (38%), Gaps = 165/809 (20%)
Query: 14 PLNAYHVGGIQVEFPYQ-PYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLL 72
P +V G+ V FPY Y Q +M + TLD H +LE P+GTGK++SLL
Sbjct: 21 PAARLNVDGLLVYFPYDYIYPEQFSYMRELKRTLD-----AKGHGVLEMPSGTGKTVSLL 75
Query: 73 CSTLAWQQNCKLK-NQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQV 131
+A+Q+ L+ +L S + P+ E V + L F + + +P +++
Sbjct: 76 ALIMAYQRAYPLEVTKLIYCSRTVPEIEKVIEELRKLLNFYEKQEGEKLPFLGLALSSR- 134
Query: 132 AMNNKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKE 191
N + ++TP F + + + Y + Y +H + + R E
Sbjct: 135 --KNLCIHPEVTPLRF-GKDVDGKCHSLTASYVRAQY----------QHDTSLPHCRFYE 181
Query: 192 NIDEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYA 251
D R + P P +++++DL +G+ C Y+
Sbjct: 182 EFDTH------GREVPLP-----------PG--------IYNLDDLKALGRHHGWCPYFL 216
Query: 252 ARSMADDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDED 310
AR A +V Y Y+++P I + ++ + A+++ DEAHNI+++ D+ SV++
Sbjct: 217 ARYSILHANVVVYSYHYLLDPKIADLVSKELARKAVVVFDEAHNIDNVCIDSMSVNLTRR 276
Query: 311 VLLKLQMELE----QVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGD 366
L + Q LE V + Q L + + LV + R+A+ A+ H + D
Sbjct: 277 TLDRCQGNLETLQKTVLRIKETDEQRLRDEYRRLVEGL--REASAARETDAHLANPVLPD 334
Query: 367 KALRELQEANI-SRQCFPILLECATKAIK-----EATDTESELPHLSGMS---------- 410
+ L+E +I + + F L + +K + ES LSG++
Sbjct: 335 EVLQEAVPGSIRTAEHFLGFLRRLLEYVKWRLRVQHVVQESPPAFLSGLAQRVCIQRKPL 394
Query: 411 ----------VITLE----GLFSSLTYFFSRNGSHVSDYQLALQKYIK-RDSKNPGGNWT 455
+ TLE FS LT + + VS Y I+ D + P
Sbjct: 395 RFCAERLRSLLHTLEITDLADFSPLT-LLANFATLVSTYAKGFTIIIEPFDDRTPTIA-N 452
Query: 456 HTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGT-----------CL 504
L C++ ++ K V E S+I+TSGTLSP++ + L T CL
Sbjct: 453 PILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMATFTMTLARVCL 512
Query: 505 EAPHVIDV--DLQVLTSVISTGPD--------NYPLNASYKTADG-------YKLMEKLC 547
P +I D ++S T D N L S DG Y+ ME
Sbjct: 513 -CPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFTSYQYMESTV 571
Query: 548 NRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGN 607
W E G + K LF+E + G++ + L+ Y + G
Sbjct: 572 ASWYEQGILENIQRNKLLFIETQDGAETS--VALEKYQEACENG---------------- 613
Query: 608 NDLNTIESQENANKKGASFLAVCRGKIVVGIPF-------------PNINDIQVSLKKKY 654
+GA L+V RGK+ GI F P + LK +
Sbjct: 614 --------------RGAILLSVARGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARL 659
Query: 655 NDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISK 714
Y + + N++ A R Q +GR IR + DYG ++ D+RF R + +
Sbjct: 660 E--YLRDQFQIRENDFLTFDAMRHAAQCVGRAIRGKTDYGLMVFADKRFARADKRGKLPR 717
Query: 715 WLRKSIKQYD---SFDASLEGLKSFFRDV 740
W+++ + + + D ++ K F R +
Sbjct: 718 WIQEHLTDANLNLTVDEGVQVAKYFLRQM 746
>gi|350538411|ref|NP_001233519.1| TFIIH basal transcription factor complex helicase subunit [Pan
troglodytes]
gi|397493359|ref|XP_003817575.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit isoform 1 [Pan paniscus]
gi|343958692|dbj|BAK63201.1| TFIIH basal transcription factor complex helicase subunit [Pan
troglodytes]
Length = 760
Score = 122 bits (307), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 187/803 (23%), Positives = 311/803 (38%), Gaps = 165/803 (20%)
Query: 20 VGGIQVEFPYQ-PYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
V G+ V FPY Y Q +M + TLD H +LE P+GTGK++SLL +A+
Sbjct: 5 VDGLLVYFPYDYIYPEQFSYMRELKRTLD-----AKGHGVLEMPSGTGKTVSLLALIMAY 59
Query: 79 QQNCKLK-NQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKN 137
Q+ L+ +L S + P+ E V + L F + + +P +++ N
Sbjct: 60 QRAYPLEVTKLIYCSRTVPEIEKVIEELRKLLNFYEKQEGEKLPFLGLALSSR---KNLC 116
Query: 138 VKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEEC 197
+ ++TP F + + H T YVR +
Sbjct: 117 IHPEVTPLRFGKD------------------------VDGKCHSLTASYVRAQYQ----- 147
Query: 198 KLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMAD 257
D +L +F G G +++++DL +G+ C Y+ AR
Sbjct: 148 ----HDSSLPHCRFYEEFDAHGREVPLPAG---IYNLDDLKALGRRQGWCPYFLARYSIL 200
Query: 258 DAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQ 316
A +V Y Y+++P I + ++ + A+++ DEAHNI+++ D+ SV++ L + Q
Sbjct: 201 HANVVVYSYHYLLDPKIADLVSKELARKAVVVFDEAHNIDNVCIDSMSVNLTRRTLDRCQ 260
Query: 317 MELE----QVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALREL 372
LE V + Q L + + LV + R+A+ A+ H + D+ L+E
Sbjct: 261 GNLETLQKTVLRIKETDEQRLRDEYRRLVEGL--REASAARETDAHLANPVLPDEVLQEA 318
Query: 373 QEANI-SRQCFPILLECATKAIK-----EATDTESELPHLSGMS---------------- 410
+I + + F L + +K + ES LSG++
Sbjct: 319 VPGSIRTAEHFLGFLRRLLEYVKWRLRVQHVVQESPPAFLSGLAQRVCIQRKPLRFCAER 378
Query: 411 ----VITLE----GLFSSLTYFFSRNGSHVSDYQLALQKYIK-RDSKNPGGNWTHTLSLW 461
+ TLE FS LT + + VS Y I+ D + P L
Sbjct: 379 LRSLLHTLEITDLADFSPLT-LLANFATLVSTYAKGFTIIIEPFDDRTPTIA-NPILHFS 436
Query: 462 CLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELG---VQFGT--------CLEAPHVI 510
C++ ++ K V E S+I+TSGTLSP++ + L V T CL P +I
Sbjct: 437 CMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMATFTMTLARVCL-CPMII 495
Query: 511 DV--DLQVLTSVISTGPD--------NYPLNASYKTADG-------YKLMEKLCNRWRET 553
D ++S T D N L S DG Y+ ME W E
Sbjct: 496 GRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFTSYQYMESTVASWYEQ 555
Query: 554 GQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTI 613
G + K LF+E + G++ + L+ Y + G
Sbjct: 556 GILENIQRNKLLFIETQDGAETS--VALEKYQEACENG---------------------- 591
Query: 614 ESQENANKKGASFLAVCRGKIVVGIPF-------------PNINDIQVSLKKKYNDTYRS 660
+GA L+V RGK+ GI F P + LK + Y
Sbjct: 592 --------RGAILLSVARGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLE--YLR 641
Query: 661 SKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSI 720
+ + N++ A R Q +GR IR + DYG ++ D+RF R + +W+++ +
Sbjct: 642 DQFQIRENDFLTFDAMRHAAQCVGRAIRGKTDYGLMVFADKRFARGDKRGKLPRWIQEHL 701
Query: 721 KQYD---SFDASLEGLKSFFRDV 740
+ + D ++ K F R +
Sbjct: 702 TDANLNLTVDEGVQVAKYFLRQM 724
>gi|426389184|ref|XP_004061004.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit [Gorilla gorilla gorilla]
gi|83405523|gb|AAI10524.1| Excision repair cross-complementing rodent repair deficiency,
complementation group 2 [Homo sapiens]
gi|119577745|gb|EAW57341.1| excision repair cross-complementing rodent repair deficiency,
complementation group 2 (xeroderma pigmentosum D),
isoform CRA_a [Homo sapiens]
gi|383416479|gb|AFH31453.1| TFIIH basal transcription factor complex helicase XPD subunit
isoform 1 [Macaca mulatta]
Length = 760
Score = 122 bits (307), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 187/803 (23%), Positives = 311/803 (38%), Gaps = 165/803 (20%)
Query: 20 VGGIQVEFPYQ-PYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
V G+ V FPY Y Q +M + TLD H +LE P+GTGK++SLL +A+
Sbjct: 5 VDGLLVYFPYDYIYPEQFSYMRELKRTLD-----AKGHGVLEMPSGTGKTVSLLALIMAY 59
Query: 79 QQNCKLK-NQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKN 137
Q+ L+ +L S + P+ E V + L F + + +P +++ N
Sbjct: 60 QRAYPLEVTKLIYCSRTVPEIEKVIEELRKLLNFYEKQEGEKLPFLGLALSSR---KNLC 116
Query: 138 VKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEEC 197
+ ++TP F + + H T YVR +
Sbjct: 117 IHPEVTPLRFGKD------------------------VDGKCHSLTASYVRAQYQ----- 147
Query: 198 KLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMAD 257
D +L +F G G +++++DL +G+ C Y+ AR
Sbjct: 148 ----HDTSLPHCRFYEEFDAHGREVPLPAG---IYNLDDLKALGRRQGWCPYFLARYSIL 200
Query: 258 DAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQ 316
A +V Y Y+++P I + ++ + A+++ DEAHNI+++ D+ SV++ L + Q
Sbjct: 201 HANVVVYSYHYLLDPKIADLVSKELARKAVVVFDEAHNIDNVCIDSMSVNLTRRTLDRCQ 260
Query: 317 MELE----QVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALREL 372
LE V + Q L + + LV + R+A+ A+ H + D+ L+E
Sbjct: 261 GNLETLQKTVLRIKETDEQRLRDEYRRLVEGL--REASAARETDAHLANPVLPDEVLQEA 318
Query: 373 QEANI-SRQCFPILLECATKAIK-----EATDTESELPHLSGMS---------------- 410
+I + + F L + +K + ES LSG++
Sbjct: 319 VPGSIRTAEHFLGFLRRLLEYVKWRLRVQHVVQESPPAFLSGLAQRVCIQRKPLRFCAER 378
Query: 411 ----VITLE----GLFSSLTYFFSRNGSHVSDYQLALQKYIK-RDSKNPGGNWTHTLSLW 461
+ TLE FS LT + + VS Y I+ D + P L
Sbjct: 379 LRSLLHTLEITDLADFSPLT-LLANFATLVSTYAKGFTIIIEPFDDRTPTIA-NPILHFS 436
Query: 462 CLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELG---VQFGT--------CLEAPHVI 510
C++ ++ K V E S+I+TSGTLSP++ + L V T CL P +I
Sbjct: 437 CMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMATFTMTLARVCL-CPMII 495
Query: 511 DV--DLQVLTSVISTGPD--------NYPLNASYKTADG-------YKLMEKLCNRWRET 553
D ++S T D N L S DG Y+ ME W E
Sbjct: 496 GRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFTSYQYMESTVASWYEQ 555
Query: 554 GQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTI 613
G + K LF+E + G++ + L+ Y + G
Sbjct: 556 GILENIQRNKLLFIETQDGAETS--VALEKYQEACENG---------------------- 591
Query: 614 ESQENANKKGASFLAVCRGKIVVGIPF-------------PNINDIQVSLKKKYNDTYRS 660
+GA L+V RGK+ GI F P + LK + Y
Sbjct: 592 --------RGAILLSVARGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLE--YLR 641
Query: 661 SKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSI 720
+ + N++ A R Q +GR IR + DYG ++ D+RF R + +W+++ +
Sbjct: 642 DQFQIRENDFLTFDAMRHAAQCVGRAIRGKTDYGLMVFADKRFARGDKRGKLPRWIQEHL 701
Query: 721 KQYD---SFDASLEGLKSFFRDV 740
+ + D ++ K F R +
Sbjct: 702 TDANLNLTVDEGVQVAKYFLRQM 724
>gi|367008340|ref|XP_003678670.1| hypothetical protein TDEL_0A01270 [Torulaspora delbrueckii]
gi|359746327|emb|CCE89459.1| hypothetical protein TDEL_0A01270 [Torulaspora delbrueckii]
Length = 775
Score = 122 bits (307), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 172/805 (21%), Positives = 323/805 (40%), Gaps = 169/805 (20%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+++ + V FPY + Y Q +MC + TLD +++LE P+GTGK++SLL T+
Sbjct: 3 FYIDDLPVLFPYPKIYPEQYKYMCDIKKTLD-----AGGNSILEMPSGTGKTVSLLSLTI 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNK 136
A+Q + ++ S + + E L N + ++ ++ ++
Sbjct: 58 AYQLHYPEHRKIIYCSRTMSEIEKALVELENLMDY---------------RSRELGVHED 102
Query: 137 NVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE 196
+T SR + + ++S+ +K V+ + TN + K D +
Sbjct: 103 FRGLGLT------SRKNLCLHPIVSKERKGT------VVDEKCRRMTNGQAKQKLETDPD 150
Query: 197 CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMA 256
K+ L C +N++ + L KG V+ E L+ + + C Y+ R M
Sbjct: 151 SKVEL------CEYHENLYNIEVEDYLPKG----VYSFERLIKYCEERKLCPYFIVRRMI 200
Query: 257 DDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLK- 314
++ Y Y+++P I + ++ K I+I DEAHNI+++ ++ S+D+ DVL +
Sbjct: 201 SLCNIIIYSYHYLLDPKIAERVSREMSKDGIVIFDEAHNIDNVCIESLSLDLTNDVLKRA 260
Query: 315 ------LQMELEQVCSVNPMI----YQPLIE--------------------MTQDLV--- 341
L+ +E+V V+ Y L++ ++QDL+
Sbjct: 261 TKGANALENRIEEVRRVDAQKLQDEYDKLVQGLHTAEILEPEEESALETPVLSQDLLTEA 320
Query: 342 --GWIERRK--ATLAKREFQHFFSCWTGDKALRELQEANIS-RQCFPILLECATKAIKEA 396
G I R + + KR ++ T K L + E S Q L K ++
Sbjct: 321 IPGNIRRAEHFVSFLKRLIEYL---KTRMKVLHVISETPKSFLQHLKQLTFIDRKPLRFC 377
Query: 397 TDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTH 456
++ S L +S I + F + ++ + + L ++ Y ++ P
Sbjct: 378 SERLSLLVRTLEVSEIEDFMALKDIATFATLISTYETGFLLIIEPYEIENAAVPNPIMRF 437
Query: 457 TLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQ- 515
T CL+ ++ K V E S+I+TSGT+SP++ + L F T L+ + + + +
Sbjct: 438 T----CLDASIAIKPVFERFSSVIITSGTISPLDMYPRMLN--FNTVLQKSYAMTLAKKS 491
Query: 516 VLTSVISTGPDNYPLNASYK---------------------TADG-------YKLMEKLC 547
L +++ G D +++ ++ T DG Y ME +
Sbjct: 492 FLPMIVTKGSDQVAISSRFEIRNDPSIVRNYGSMLVEFSKITPDGMVVFFPSYLYMESII 551
Query: 548 NRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGN 607
+ W+ G + K + VE + + L+ Y + S G
Sbjct: 552 SMWQTMGILDEVWKHKLILVETPDAQETS--LALETYRKACSNG---------------- 593
Query: 608 NDLNTIESQENANKKGASFLAVCRGKIVVGIPFPN---INDIQVSLKKKYNDTYRSSKNL 664
+GA L+V RGK+ GI F + + + + +Y ++ L
Sbjct: 594 --------------RGAILLSVARGKVSEGIDFDHHYGRTVLMIGIPFQYTESRILKARL 639
Query: 665 --------LSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWL 716
+ N++ A R Q +GR +R + DYG ++L D RF +RN+ + KW+
Sbjct: 640 EFLRENYQIRENDFLSFDAMRHAAQCLGRVLRGKDDYGVMVLADRRFSRKRNQ--LPKWI 697
Query: 717 RKSIKQYD---SFDASLEGLKSFFR 738
+ + D S D ++ K F R
Sbjct: 698 SQGLSDADLNLSTDMAIANAKQFLR 722
>gi|195565263|ref|XP_002106221.1| GD16747 [Drosophila simulans]
gi|194203595|gb|EDX17171.1| GD16747 [Drosophila simulans]
Length = 308
Score = 122 bits (307), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/226 (32%), Positives = 111/226 (49%), Gaps = 61/226 (26%)
Query: 500 FGTCLEAPHVIDVDLQVLTSVISTGPDN----YPLNASYKTADGYKLMEKLCNRWRETGQ 555
F C + P + Q + +V PD +P Y ++ K + W+ +G
Sbjct: 7 FFFCSDNPKYVSSLGQTILNVARIVPDGLLVFFP---------SYPMLNKCVDAWQASGL 57
Query: 556 WSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIES 615
W+ ++ KKP+F+EP+ S++ F ++ +Y +I
Sbjct: 58 WADISCKKPIFLEPR--SKDQFTSTMEEFYQAIR-------------------------- 89
Query: 616 QENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKKYNDTYRS 660
+ KGA F+AVCRGK I+ G+PFP + D +V LK++Y + R+
Sbjct: 90 ----DSKGAVFMAVCRGKVSEGLDFADRNGRAVIITGLPFPPLKDPKVILKRRYLEANRT 145
Query: 661 SKN-LLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQE 705
+N LLSG EWY A RA+NQAIGR IRHR DYGAI+L D RF++
Sbjct: 146 RENQLLSGQEWYNLDATRAVNQAIGRVIRHRNDYGAILLCDSRFKD 191
>gi|354544295|emb|CCE41018.1| hypothetical protein CPAR2_300070 [Candida parapsilosis]
Length = 794
Score = 122 bits (306), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 184/854 (21%), Positives = 336/854 (39%), Gaps = 189/854 (22%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+++ + V FPY + Y Q +M + TLD G+C +LE P+GTGK++SLL T+
Sbjct: 3 FYIDDLPVLFPYPRIYPEQYAYMSDIKKTLDVG---GNC--ILEMPSGTGKTISLLSLTV 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPL-------ANGGGFIPESQPSTIPPSTNGQTA 129
A+Q + ++ S + + E L A+ G++ + + + N
Sbjct: 58 AYQMHYPEHRKIVYCSRTMSEIEKALIELHKLMEFRASELGYVEDFRGLGLTSRKNLCLN 117
Query: 130 QVAMNNK--NVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYV 187
+ K NV +M + T+ Q+ + I + V
Sbjct: 118 PLISREKKGNVVDEMCRRV-----TNGQLKEKIEK----------------------GVV 150
Query: 188 RDKENIDEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGC 247
+++ I + K L C + ++ + H + +G V+ + L+ + + C
Sbjct: 151 TEEDQIQDPAKYSL------CSFHEKLYDLDPHDLIPQG----VYSFDALIRYCKEMGTC 200
Query: 248 SYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVD 306
Y+ AR M ++ Y Y+++P I + ++ K +I+I DEAHNI+++ ++ S+D
Sbjct: 201 PYFTARRMIPFCNIIIYSYHYLLDPKIADRVSRELSKDSIIIFDEAHNIDNVCIESLSLD 260
Query: 307 IDEDVLL----------------------KLQMELEQVCS---------------VNPMI 329
+ EDVL KLQ E EQ+ NP++
Sbjct: 261 LTEDVLKRATRGANKLADAVEDMKAQDSEKLQNEYEQLVEGLRQAEVEREQEMFMSNPIL 320
Query: 330 YQPLIEMTQDLVGWIERRKATLA--KREFQHFFSCWTGDKALRELQEANIS-RQCFPILL 386
Q L++ + + G I + + +A KR ++ T K L + E S Q L
Sbjct: 321 PQDLLD--EAIPGNIRKGEHFVAFLKRFIEYL---KTRMKVLHVISETPTSFLQHLKELT 375
Query: 387 ECATKAIKEATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRD 446
K +K ++ S L ++ I + F + ++ + +QL L+ +
Sbjct: 376 YIDKKPLKFCSERLSLLVKTLELTEIEDFNALKDIATFATLVSTYDTGFQLILEPFETEG 435
Query: 447 SKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEA 506
S P L CL+ ++ K V E S+I+TSGT+SP++ + L F T ++
Sbjct: 436 STVPNP----MLHFTCLDASIAIKPVFERFSSVIITSGTISPLDMYPKMLN--FQTVIQE 489
Query: 507 PHVIDVDLQ-VLTSVISTGPDNYPLNASYK---------------------TADG----- 539
+ + + + L +++ G D +++ ++ T DG
Sbjct: 490 SYAMTLARRSFLPMIVTKGSDQVSISSRFEIRNDPSVVRNYGSLLIEFAKITPDGMVVFF 549
Query: 540 --YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVV 597
Y ME + + W+ G + K + VE + + L+ Y + S G
Sbjct: 550 PSYLYMESIISMWQTMGVLDEVWKHKLILVETPDAQETS--LALETYRKACSNG------ 601
Query: 598 RKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPN---INDIQVSLKKKY 654
+GA L+V RGK+ GI F + + + + +Y
Sbjct: 602 ------------------------RGAVLLSVARGKVSEGIDFDHHYGRTVLMIGIPFQY 637
Query: 655 NDTYRSSKNL--------LSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEE 706
++ L + N++ A R Q +GR +R + DYG ++L D RF
Sbjct: 638 TESRILKARLEFMRDHFQIKENDFLSFDAMRHAAQCLGRVLRGKDDYGIMVLADRRFA-- 695
Query: 707 RNRAHISKWLRKSIKQYD---SFDASLEGLKSFFRDVKGWVGKKMFNGLENSDNDVDHVS 763
R +A + KW+ +++ D S D +L K F R + K D + V
Sbjct: 696 RKKAQLPKWIAQALNDSDTNLSTDMALATAKKFLRSLAQPTNPK--------DQEGVSVW 747
Query: 764 SMDQCKEVTKQNTQ 777
+DQ + KQ Q
Sbjct: 748 DIDQLEAYQKQYNQ 761
>gi|395854140|ref|XP_003799556.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit isoform 1 [Otolemur garnettii]
Length = 760
Score = 122 bits (306), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 186/803 (23%), Positives = 312/803 (38%), Gaps = 165/803 (20%)
Query: 20 VGGIQVEFPYQ-PYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
V G+ V FPY Y Q +M + TLD H +LE P+GTGK++SLL +A+
Sbjct: 5 VDGLLVYFPYDYIYPEQFSYMRELKRTLD-----AKGHGVLEMPSGTGKTVSLLALIIAY 59
Query: 79 QQNCKLK-NQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKN 137
Q+ L+ +L S + P+ E V + L F + + +P +++ N
Sbjct: 60 QRAYPLEVTKLIYCSRTVPEIEKVIEELRKLLNFYEKQEGEKLPFLGLALSSR---KNLC 116
Query: 138 VKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEEC 197
+ ++TP F + + H T YVR +
Sbjct: 117 IHPEVTPLRFGKD------------------------VDGKCHSLTASYVRAQYQ----- 147
Query: 198 KLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMAD 257
D +L +F G G +++++DL +G+ C Y+ AR
Sbjct: 148 ----QDTSLPHCRFYEEFDAHGRQVPLPAG---IYNLDDLKTLGRRQGWCPYFLARYSIL 200
Query: 258 DAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQ 316
A +V Y Y+++P I + ++ + A+++ DEAHNI+++ D+ SV++ +L + Q
Sbjct: 201 HANVVVYSYHYLLDPKIADLVSKELARKAVVVFDEAHNIDNVCIDSMSVNLTRRILDRCQ 260
Query: 317 MELE----QVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALREL 372
LE V + Q L + + LV + R+A+ A+ H + D+ L+E
Sbjct: 261 GNLETLQKTVLRIKETDEQRLRDEYRRLVEGL--REASAARETDAHLANPVLPDEVLQEA 318
Query: 373 QEANI-SRQCFPILLECATKAIK-----EATDTESELPHLSGMS---------------- 410
+I + + F L + +K + ES LSG++
Sbjct: 319 VPGSIRTAEHFLGFLRRLLEYVKWRLRVQHVVQESPPAFLSGLAQRVCIQRKPLRFCAER 378
Query: 411 ----VITLE----GLFSSLTYFFSRNGSHVSDYQLALQKYIK-RDSKNPGGNWTHTLSLW 461
+ TLE FS LT + + VS Y I+ D + P L
Sbjct: 379 LRSLLHTLEITDLADFSPLT-LLANFATLVSTYAKGFTIIIEPFDDRTPTIA-NPILHFS 436
Query: 462 CLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELG---VQFGT--------CLEAPHVI 510
C++ ++ K V E S+I+TSGTLSP++ + L V T CL P +I
Sbjct: 437 CMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMATFTMTLARVCL-CPMII 495
Query: 511 DV--DLQVLTSVISTGPD--------NYPLNASYKTADG-------YKLMEKLCNRWRET 553
D ++S + D N L S DG Y+ ME W E
Sbjct: 496 GRGNDQVAISSKFESREDIAVIRNYGNLLLEMSAVVPDGIVAFFTSYQYMESTVASWYEQ 555
Query: 554 GQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTI 613
G + K LF+E + G++ + L+ Y + G
Sbjct: 556 GILENIQRNKLLFIETQDGAETS--VALEKYQEACENG---------------------- 591
Query: 614 ESQENANKKGASFLAVCRGKIVVGIPF-------------PNINDIQVSLKKKYNDTYRS 660
+GA L+V RGK+ GI F P + LK + Y
Sbjct: 592 --------RGAILLSVARGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLE--YLR 641
Query: 661 SKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSI 720
+ + N++ A R Q +GR IR + DYG ++ D+RF R + +W+++ +
Sbjct: 642 DQFQIRENDFLTFDAMRHAAQCVGRAIRGKTDYGLMVFADKRFARVDKRGKLPRWIQEHL 701
Query: 721 KQYD---SFDASLEGLKSFFRDV 740
+ + D ++ K F R +
Sbjct: 702 TDANLNLTVDEGVQVAKYFLRQM 724
>gi|402905923|ref|XP_003915757.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit [Papio anubis]
Length = 760
Score = 122 bits (306), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 187/803 (23%), Positives = 311/803 (38%), Gaps = 165/803 (20%)
Query: 20 VGGIQVEFPYQ-PYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
V G+ V FPY Y Q +M + TLD H +LE P+GTGK++SLL +A+
Sbjct: 5 VDGLLVYFPYDYIYPEQFSYMRELKRTLD-----AKGHGVLEMPSGTGKTVSLLALIMAY 59
Query: 79 QQNCKLK-NQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKN 137
Q+ L+ +L S + P+ E V + L F + + +P +++ N
Sbjct: 60 QRAYPLEVTKLIYCSRTVPEIEKVIEELRKLLNFYEKQEGEKLPFLGLALSSR---KNLC 116
Query: 138 VKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEEC 197
+ ++TP F + + H T YVR +
Sbjct: 117 IHPEVTPLRFGKD------------------------VDGKCHSLTASYVRAQYQ----- 147
Query: 198 KLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMAD 257
D +L +F G G +++++DL +G+ C Y+ AR
Sbjct: 148 ----HDTSLPHCRFYEEFDAHGREVPLPAG---IYNLDDLKALGRRQGWCPYFLARYSIL 200
Query: 258 DAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQ 316
A +V Y Y+++P I + ++ + A+++ DEAHNI+++ D+ SV++ L + Q
Sbjct: 201 HANVVVYSYHYLLDPKIADLVSKELARKAVVVFDEAHNIDNVCIDSMSVNLTRRTLDRCQ 260
Query: 317 MELE----QVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALREL 372
LE V + Q L + + LV + R+A+ A+ H + D+ L+E
Sbjct: 261 GNLETLQKTVLRIKETDEQRLRDEYRRLVEGL--REASAARETDAHLANPVLPDEVLQEA 318
Query: 373 QEANI-SRQCFPILLECATKAIK-----EATDTESELPHLSGMS---------------- 410
+I + + F L + +K + ES LSG++
Sbjct: 319 VPGSIRTAEHFLGFLRRLLEYVKWRLRVQHVVQESPPAFLSGLAQRVCIQRKPLRFCAER 378
Query: 411 ----VITLE----GLFSSLTYFFSRNGSHVSDYQLALQKYIK-RDSKNPGGNWTHTLSLW 461
+ TLE FS LT + + VS Y I+ D + P L
Sbjct: 379 LRSLLHTLEITDLADFSPLT-LLANFATLVSTYAKGFTIIIEPFDDRTPTIA-NPILHFS 436
Query: 462 CLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELG---VQFGT--------CLEAPHVI 510
C++ ++ K V E S+I+TSGTLSP++ + L V T CL P +I
Sbjct: 437 CMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMATFTMTLARVCL-CPMII 495
Query: 511 DV--DLQVLTSVISTGPD--------NYPLNASYKTADG-------YKLMEKLCNRWRET 553
D ++S T D N L S DG Y+ ME W E
Sbjct: 496 GRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFTSYQYMESTVASWYEQ 555
Query: 554 GQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTI 613
G + K LF+E + G++ + L+ Y + G
Sbjct: 556 GILENIQRNKLLFIETQDGAETS--VALEKYQEACENG---------------------- 591
Query: 614 ESQENANKKGASFLAVCRGKIVVGIPF-------------PNINDIQVSLKKKYNDTYRS 660
+GA L+V RGK+ GI F P + LK + Y
Sbjct: 592 --------RGAILLSVARGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLE--YLR 641
Query: 661 SKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSI 720
+ + N++ A R Q +GR IR + DYG ++ D+RF R + +W+++ +
Sbjct: 642 DQFQIRENDFLTFDAMRHAAQCVGRAIRGKTDYGLMVFADKRFARGDKRGKLPRWIQEHL 701
Query: 721 KQYD---SFDASLEGLKSFFRDV 740
+ + D ++ K F R +
Sbjct: 702 TDANLNLTVDEGVQVAKYFLRQM 724
>gi|344299882|gb|EGW30235.1| DNA helicase component of transcription factor b [Spathaspora
passalidarum NRRL Y-27907]
Length = 792
Score = 122 bits (306), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 177/818 (21%), Positives = 325/818 (39%), Gaps = 183/818 (22%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+ + + V FPY + Y Q +MC + TLD G+C +LE P+GTGK++SLL T+
Sbjct: 3 FFIDDLPVLFPYPKIYPEQYAYMCDIKKTLDVG---GNC--ILEMPSGTGKTVSLLSLTV 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPL-------ANGGGFIPESQPSTIPPSTNGQTA 129
A+Q + + ++ S + + E L AN G++ + + +
Sbjct: 58 AYQMHYPEQRKIVYCSRTMSEIEKALIELYKLMEYRANELGYVEDFRGLGL--------- 108
Query: 130 QVAMNNKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRD 189
SR + + IS+ +K V+ + TN +++
Sbjct: 109 -------------------TSRKNLCLHPTISKERKG------VVVDEKCRRITNGQLKN 143
Query: 190 KEN---IDEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRG 246
K I E+ + + N C +N+ + H + G V+ + L+ +
Sbjct: 144 KIEKGMISEQQQADNPEVNSLCSFHENLEDMDQHDLIPPG----VYSFDGLLKYCKQRGT 199
Query: 247 CSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSV 305
C Y+ R M ++ Y Y+++P I + ++ K +I+I DEAHNI+++ ++ S+
Sbjct: 200 CPYFTVRRMMPFCNIIIYSYHYLLDPKIADRVSKELSKDSIVIFDEAHNIDNVCIESLSL 259
Query: 306 DIDEDVLL----------------------KLQMELEQVCS---------------VNPM 328
D+ ED L KLQ E EQ+ NP+
Sbjct: 260 DLTEDTLKRATRGANKLGDAIEEMKAQDSEKLQNEYEQLVEGLRQAEIARNEELFMSNPI 319
Query: 329 IYQPLIEMTQDLVGWIERRKATLA--KREFQHFFSCWTGDKALRELQEANIS-RQCFPIL 385
+ Q L++ + + G I + + +A KR ++ T K L + E IS + L
Sbjct: 320 LPQDLLD--EAIPGNIRKGEHFIAFLKRFIEYL---KTRMKVLHVISETPISFLKHLKEL 374
Query: 386 LECATKAIKEATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKR 445
K ++ ++ S L ++ I + F + ++ + +QL L+ Y
Sbjct: 375 TYIDRKPLRFCSERLSLLVRTLELAEIEDFNALKDIATFATLVSTYDTGFQLILEPYETE 434
Query: 446 DSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLE 505
S P L CL+ ++ K V E SII+TSGT+SP++ + L F T ++
Sbjct: 435 GSSVPNP----ILHFTCLDASIAIKPVFERFYSIIITSGTISPLDMYPKMLN--FQTVIQ 488
Query: 506 APHVIDVDLQ-VLTSVISTGPDNYPLNASYK---------------------TADG---- 539
+ + + + L +++ G D +++ ++ T DG
Sbjct: 489 ESYAMTLARRSFLPMIVTKGSDQVSISSRFEIRNDPSVVRNYGSLLVEFSKITPDGMVVF 548
Query: 540 ---YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAV 596
Y ME + + W+ G + K + VE + + L+ Y + S G
Sbjct: 549 FPSYLYMESIISMWQNMGVLDEVWKYKLILVETPDAQETS--LALETYRKACSNG----- 601
Query: 597 VRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPN---INDIQVSLKKK 653
+GA L+V RGK+ GI F + + + + +
Sbjct: 602 -------------------------RGAVLLSVARGKVSEGIDFDHHYGRTVLMIGIPFQ 636
Query: 654 YNDTYRSSKNL--------LSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQE 705
Y ++ L + N++ A R Q +GR +R + DYG ++L D RF
Sbjct: 637 YTESRILKARLEFMRDHFQIRENDFLSFDAMRHAAQCLGRVLRGKDDYGIMVLADRRFSR 696
Query: 706 ERNRAHISKWLRKSIKQYD---SFDASLEGLKSFFRDV 740
++N+ + KW+ +++ D S D +L K F R +
Sbjct: 697 KKNQ--LPKWIAQALNDSDTNLSTDMALATAKRFLRSL 732
>gi|296645|emb|CAA36463.1| ercc2 gene product [Homo sapiens]
Length = 730
Score = 122 bits (306), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 187/803 (23%), Positives = 311/803 (38%), Gaps = 165/803 (20%)
Query: 20 VGGIQVEFPYQ-PYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
V G+ V FPY Y Q +M + TLD H +LE P+GTGK++SLL +A+
Sbjct: 5 VDGLLVYFPYDYIYPEQFSYMRELKRTLD-----AKGHGVLEMPSGTGKTVSLLALIMAY 59
Query: 79 QQNCKLK-NQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKN 137
Q+ L+ +L S + P+ E V + L F + + +P +++ N
Sbjct: 60 QRAYPLEVTKLIYCSRTVPEIEKVIEELRKLLNFYEKQEGEKLPFLGLALSSR---KNLC 116
Query: 138 VKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEEC 197
+ ++TP F + + H T YVR +
Sbjct: 117 IHPEVTPLRFGKD------------------------VDGKCHSLTASYVRAQYQ----- 147
Query: 198 KLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMAD 257
D +L +F G G +++++DL +G+ C Y+ AR
Sbjct: 148 ----HDTSLPHCRFYEEFDAHGREVPLPAG---IYNLDDLKALGRRQGWCPYFLARYSIL 200
Query: 258 DAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQ 316
A +V Y Y+++P I + ++ + A+++ DEAHNI+++ D+ SV++ L + Q
Sbjct: 201 HANVVVYSYHYLLDPKIADLVSKELARKAVVVFDEAHNIDNVCIDSMSVNLTRRTLDRCQ 260
Query: 317 MELE----QVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALREL 372
LE V + Q L + + LV + R+A+ A+ H + D+ L+E
Sbjct: 261 GNLETLQKTVLRIKETDEQRLRDEYRRLVEGL--REASAARETDAHLANPVLPDEVLQEA 318
Query: 373 QEANI-SRQCFPILLECATKAIK-----EATDTESELPHLSGMS---------------- 410
+I + + F L + +K + ES LSG++
Sbjct: 319 VPGSIRTAEHFLGFLRRLLEYVKWRLRVQHVVQESPPAFLSGLAQRVCIQRKPLRFCAER 378
Query: 411 ----VITLE----GLFSSLTYFFSRNGSHVSDYQLALQKYIK-RDSKNPGGNWTHTLSLW 461
+ TLE FS LT + + VS Y I+ D + P L
Sbjct: 379 LRSLLHTLEITDLADFSPLT-LLANFATLVSTYAKGFTIIIEPFDDRTPTIA-NPILHFS 436
Query: 462 CLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELG---VQFGT--------CLEAPHVI 510
C++ ++ K V E S+I+TSGTLSP++ + L V T CL P +I
Sbjct: 437 CMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMATFTMTLARVCL-CPMII 495
Query: 511 DV--DLQVLTSVISTGPD--------NYPLNASYKTADG-------YKLMEKLCNRWRET 553
D ++S T D N L S DG Y+ ME W E
Sbjct: 496 GRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFTSYQYMESTVASWYEQ 555
Query: 554 GQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTI 613
G + K LF+E + G++ + L+ Y + G
Sbjct: 556 GILENIQRNKLLFIETQDGAETS--VALEKYQEACENG---------------------- 591
Query: 614 ESQENANKKGASFLAVCRGKIVVGIPF-------------PNINDIQVSLKKKYNDTYRS 660
+GA L+V RGK+ GI F P + LK + Y
Sbjct: 592 --------RGAILLSVARGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLE--YLR 641
Query: 661 SKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSI 720
+ + N++ A R Q +GR IR + DYG ++ D+RF R + +W+++ +
Sbjct: 642 DQFQIRENDFLTFDAMRHAAQCVGRAIRGKTDYGLMVFADKRFARGDKRGKLPRWIQEHL 701
Query: 721 KQYD---SFDASLEGLKSFFRDV 740
+ + D ++ K F R +
Sbjct: 702 TDANLNLTVDEGVQVAKYFLRQM 724
>gi|15834617|ref|NP_000391.1| TFIIH basal transcription factor complex helicase XPD subunit
isoform 1 [Homo sapiens]
gi|119540|sp|P18074.1|ERCC2_HUMAN RecName: Full=TFIIH basal transcription factor complex helicase XPD
subunit; AltName: Full=Basic transcription factor 2 80
kDa subunit; Short=BTF2 p80; AltName: Full=CXPD;
AltName: Full=DNA excision repair protein ERCC-2;
AltName: Full=DNA repair protein complementing XP-D
cells; AltName: Full=TFIIH basal transcription factor
complex 80 kDa subunit; Short=TFIIH 80 kDa subunit;
Short=TFIIH p80; AltName: Full=Xeroderma pigmentosum
group D-complementing protein
gi|17939382|gb|AAL48323.1| ERCC2 [Homo sapiens]
gi|82568960|gb|AAI08256.1| Excision repair cross-complementing rodent repair deficiency,
complementation group 2 [Homo sapiens]
Length = 760
Score = 122 bits (306), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 187/803 (23%), Positives = 311/803 (38%), Gaps = 165/803 (20%)
Query: 20 VGGIQVEFPYQ-PYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
V G+ V FPY Y Q +M + TLD H +LE P+GTGK++SLL +A+
Sbjct: 5 VDGLLVYFPYDYIYPEQFSYMRELKRTLD-----AKGHGVLEMPSGTGKTVSLLALIMAY 59
Query: 79 QQNCKLK-NQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKN 137
Q+ L+ +L S + P+ E V + L F + + +P +++ N
Sbjct: 60 QRAYPLEVTKLIYCSRTVPEIEKVIEELRKLLNFYEKQEGEKLPFLGLALSSR---KNLC 116
Query: 138 VKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEEC 197
+ ++TP F + + H T YVR +
Sbjct: 117 IHPEVTPLRFGKD------------------------VDGKCHSLTASYVRAQYQ----- 147
Query: 198 KLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMAD 257
D +L +F G G +++++DL +G+ C Y+ AR
Sbjct: 148 ----HDTSLPHCRFYEEFDAHGREVPLPAG---IYNLDDLKALGRRQGWCPYFLARYSIL 200
Query: 258 DAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQ 316
A +V Y Y+++P I + ++ + A+++ DEAHNI+++ D+ SV++ L + Q
Sbjct: 201 HANVVVYSYHYLLDPKIADLVSKELARKAVVVFDEAHNIDNVCIDSMSVNLTRRTLDRCQ 260
Query: 317 MELE----QVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALREL 372
LE V + Q L + + LV + R+A+ A+ H + D+ L+E
Sbjct: 261 GNLETLQKTVLRIKETDEQRLRDEYRRLVEGL--REASAARETDAHLANPVLPDEVLQEA 318
Query: 373 QEANI-SRQCFPILLECATKAIK-----EATDTESELPHLSGMS---------------- 410
+I + + F L + +K + ES LSG++
Sbjct: 319 VPGSIRTAEHFLGFLRRLLEYVKWRLRVQHVVQESPPAFLSGLAQRVCIQRKPLRFCAER 378
Query: 411 ----VITLE----GLFSSLTYFFSRNGSHVSDYQLALQKYIK-RDSKNPGGNWTHTLSLW 461
+ TLE FS LT + + VS Y I+ D + P L
Sbjct: 379 LRSLLHTLEITDLADFSPLT-LLANFATLVSTYAKGFTIIIEPFDDRTPTIA-NPILHFS 436
Query: 462 CLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELG---VQFGT--------CLEAPHVI 510
C++ ++ K V E S+I+TSGTLSP++ + L V T CL P +I
Sbjct: 437 CMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMATFTMTLARVCL-CPMII 495
Query: 511 DV--DLQVLTSVISTGPD--------NYPLNASYKTADG-------YKLMEKLCNRWRET 553
D ++S T D N L S DG Y+ ME W E
Sbjct: 496 GRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFTSYQYMESTVASWYEQ 555
Query: 554 GQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTI 613
G + K LF+E + G++ + L+ Y + G
Sbjct: 556 GILENIQRNKLLFIETQDGAETS--VALEKYQEACENG---------------------- 591
Query: 614 ESQENANKKGASFLAVCRGKIVVGIPF-------------PNINDIQVSLKKKYNDTYRS 660
+GA L+V RGK+ GI F P + LK + Y
Sbjct: 592 --------RGAILLSVARGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLE--YLR 641
Query: 661 SKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSI 720
+ + N++ A R Q +GR IR + DYG ++ D+RF R + +W+++ +
Sbjct: 642 DQFQIRENDFLTFDAMRHAAQCVGRAIRGKTDYGLMVFADKRFARGDKRGKLPRWIQEHL 701
Query: 721 KQYD---SFDASLEGLKSFFRDV 740
+ + D ++ K F R +
Sbjct: 702 TDANLNLTVDEGVQVAKYFLRQM 724
>gi|380799421|gb|AFE71586.1| TFIIH basal transcription factor complex helicase XPD subunit
isoform 1, partial [Macaca mulatta]
Length = 771
Score = 122 bits (306), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 187/803 (23%), Positives = 311/803 (38%), Gaps = 165/803 (20%)
Query: 20 VGGIQVEFPYQ-PYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
V G+ V FPY Y Q +M + TLD H +LE P+GTGK++SLL +A+
Sbjct: 16 VDGLLVYFPYDYIYPEQFSYMRELKRTLD-----AKGHGVLEMPSGTGKTVSLLALIMAY 70
Query: 79 QQNCKLK-NQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKN 137
Q+ L+ +L S + P+ E V + L F + + +P +++ N
Sbjct: 71 QRAYPLEVTKLIYCSRTVPEIEKVIEELRKLLNFYEKQEGEKLPFLGLALSSR---KNLC 127
Query: 138 VKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEEC 197
+ ++TP F + + H T YVR +
Sbjct: 128 IHPEVTPLRFGKD------------------------VDGKCHSLTASYVRAQYQ----- 158
Query: 198 KLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMAD 257
D +L +F G G +++++DL +G+ C Y+ AR
Sbjct: 159 ----HDTSLPHCRFYEEFDAHGREVPLPAG---IYNLDDLKALGRRQGWCPYFLARYSIL 211
Query: 258 DAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQ 316
A +V Y Y+++P I + ++ + A+++ DEAHNI+++ D+ SV++ L + Q
Sbjct: 212 HANVVVYSYHYLLDPKIADLVSKELARKAVVVFDEAHNIDNVCIDSMSVNLTRRTLDRCQ 271
Query: 317 MELE----QVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALREL 372
LE V + Q L + + LV + R+A+ A+ H + D+ L+E
Sbjct: 272 GNLETLQKTVLRIKETDEQRLRDEYRRLVEGL--REASAARETDAHLANPVLPDEVLQEA 329
Query: 373 QEANI-SRQCFPILLECATKAIK-----EATDTESELPHLSGMS---------------- 410
+I + + F L + +K + ES LSG++
Sbjct: 330 VPGSIRTAEHFLGFLRRLLEYVKWRLRVQHVVQESPPAFLSGLAQRVCIQRKPLRFCAER 389
Query: 411 ----VITLE----GLFSSLTYFFSRNGSHVSDYQLALQKYIK-RDSKNPGGNWTHTLSLW 461
+ TLE FS LT + + VS Y I+ D + P L
Sbjct: 390 LRSLLHTLEITDLADFSPLT-LLANFATLVSTYAKGFTIIIEPFDDRTPTIA-NPILHFS 447
Query: 462 CLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELG---VQFGT--------CLEAPHVI 510
C++ ++ K V E S+I+TSGTLSP++ + L V T CL P +I
Sbjct: 448 CMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMATFTMTLARVCL-CPMII 506
Query: 511 DV--DLQVLTSVISTGPD--------NYPLNASYKTADG-------YKLMEKLCNRWRET 553
D ++S T D N L S DG Y+ ME W E
Sbjct: 507 GRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFTSYQYMESTVASWYEQ 566
Query: 554 GQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTI 613
G + K LF+E + G++ + L+ Y + G
Sbjct: 567 GILENIQRNKLLFIETQDGAETS--VALEKYQEACENG---------------------- 602
Query: 614 ESQENANKKGASFLAVCRGKIVVGIPF-------------PNINDIQVSLKKKYNDTYRS 660
+GA L+V RGK+ GI F P + LK + Y
Sbjct: 603 --------RGAILLSVARGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLE--YLR 652
Query: 661 SKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSI 720
+ + N++ A R Q +GR IR + DYG ++ D+RF R + +W+++ +
Sbjct: 653 DQFQIRENDFLTFDAMRHAAQCVGRAIRGKTDYGLMVFADKRFARGDKRGKLPRWIQEHL 712
Query: 721 KQYD---SFDASLEGLKSFFRDV 740
+ + D ++ K F R +
Sbjct: 713 TDANLNLTVDEGVQVAKYFLRQM 735
>gi|444516793|gb|ELV11286.1| Fanconi anemia group J protein [Tupaia chinensis]
Length = 257
Score = 122 bits (305), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 99/157 (63%), Gaps = 2/157 (1%)
Query: 233 DIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEA 292
DIE+LVN+G+ ++ C YY AR + +DA ++FCPY+Y+++ IR +M++++K ++ILDEA
Sbjct: 6 DIEELVNLGKKLKACPYYTARELIEDADIIFCPYNYLLDAQIRESMDINLKEQVVILDEA 65
Query: 293 HNIEDIARDAGSVDIDEDVLLKLQMELEQVCSVN--PMIYQPLIEMTQDLVGWIERRKAT 350
HNIED AR++ S + E L + EL+ + + N ++PL + L+ W+E
Sbjct: 66 HNIEDCARESASYSVTEVQLRFARDELDSLVNSNIRKKDHEPLRAVCYSLINWLEANSEH 125
Query: 351 LAKREFQHFFSCWTGDKALRELQEANISRQCFPILLE 387
L +R+++ W+G++ L L + I+ FPIL E
Sbjct: 126 LVERDYESSCKIWSGNEMLLNLHKMGITTATFPILQE 162
>gi|296234099|ref|XP_002762284.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit isoform 1 [Callithrix jacchus]
Length = 760
Score = 122 bits (305), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 186/803 (23%), Positives = 313/803 (38%), Gaps = 165/803 (20%)
Query: 20 VGGIQVEFPYQ-PYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
V G+ V FPY Y Q +M + TLD H +LE P+GTGK++SLL +A+
Sbjct: 5 VDGLLVYFPYDYIYPEQFSYMRELKRTLD-----AKGHGVLEMPSGTGKTVSLLALIMAY 59
Query: 79 QQNCKLK-NQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKN 137
Q+ L+ +L S + P+ E V + L F + + +P +++ N
Sbjct: 60 QRAYPLEVTKLIYCSRTVPEIEKVIEELRKLLNFYEKQEGEKLPFLGLALSSR---KNLC 116
Query: 138 VKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEEC 197
+ ++TP F + + + Y + Y +H + + R E D
Sbjct: 117 IHPEVTPLRF-GKDVDGKCHSLTASYVRAQY----------QHDTSLPHCRFYEEFDTH- 164
Query: 198 KLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMAD 257
R + P P +++++DL +G+ C Y+ AR
Sbjct: 165 -----GREVPLP-----------PG--------IYNLDDLKALGRHQGWCPYFLARYSIL 200
Query: 258 DAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQ 316
A +V Y Y+++P I + ++ + A+++ DEAHNI+++ D+ SV++ L + Q
Sbjct: 201 HANVVVYSYHYLLDPKIADLVSKELARKAVVVFDEAHNIDNVCIDSMSVNLTRRTLDRCQ 260
Query: 317 MELE----QVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALREL 372
LE V + Q L + + LV + R+A+ A+ H + D+ L+E
Sbjct: 261 GNLETLQKTVLRIKETDEQRLRDEYRRLVEGL--REASAARETDAHLANPVLPDEVLQEA 318
Query: 373 QEANI-SRQCFPILLECATKAIK-----EATDTESELPHLSGMS---------------- 410
+I + + F L + +K + ES LSG++
Sbjct: 319 VPGSIRTAEHFLGFLRRLLEYVKWRLRVQHVVQESPPAFLSGLAQRVCIQRKPLRFCAER 378
Query: 411 ----VITLE----GLFSSLTYFFSRNGSHVSDYQLALQKYIK-RDSKNPGGNWTHTLSLW 461
+ TLE FS LT + + VS Y I+ D + P L
Sbjct: 379 LRSLLHTLEITDLADFSPLT-LLANFATLVSTYAKGFTIIIEPFDDRTPTIA-NPILHFS 436
Query: 462 CLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELG---VQFGT--------CLEAPHVI 510
C++ ++ K V E S+I+TSGTLSP++ + L V T CL P +I
Sbjct: 437 CMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMATFTMTLARVCL-CPMII 495
Query: 511 DV--DLQVLTSVISTGPD--------NYPLNASYKTADG-------YKLMEKLCNRWRET 553
D ++S T D N L S DG Y+ ME W E
Sbjct: 496 GRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFTSYQYMESTVASWYEQ 555
Query: 554 GQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTI 613
G + K LF+E + G++ + L+ Y + G
Sbjct: 556 GILENIQRNKLLFIETQDGAETS--VALEKYQEACENG---------------------- 591
Query: 614 ESQENANKKGASFLAVCRGKIVVGIPF-------------PNINDIQVSLKKKYNDTYRS 660
+GA L+V RGK+ GI F P + LK + Y
Sbjct: 592 --------RGAILLSVARGKVSEGIDFVHHYGRAVIMFGVPYVYTQSHILKARLE--YLR 641
Query: 661 SKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSI 720
+ + N++ A R Q +GR IR + DYG ++ D+RF R + +W+++ +
Sbjct: 642 DQFQIRENDFLTFDAMRHAAQCVGRAIRGKTDYGLMVFADKRFARADKRGKLPRWIQEHL 701
Query: 721 KQYD---SFDASLEGLKSFFRDV 740
+ + D ++ K F R +
Sbjct: 702 TDANLNLTVDEGVQVAKYFLRQM 724
>gi|239613258|gb|EEQ90245.1| ATP-dependent RNA helicase chl1 [Ajellomyces dermatitidis ER-3]
gi|327357445|gb|EGE86302.1| ATP-dependent RNA helicase chl1 [Ajellomyces dermatitidis ATCC
18188]
Length = 851
Score = 122 bits (305), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 164/706 (23%), Positives = 274/706 (38%), Gaps = 145/706 (20%)
Query: 146 IFYASRTHSQISQVISEYKKTAY--RVPMAV-------------------------LASR 178
+FY SRTHSQ++Q E ++ VP V L SR
Sbjct: 168 VFYCSRTHSQLTQFAHELRRVKLPPSVPPEVDDHDATADSASHPDDTLEESMKHLSLGSR 227
Query: 179 KHYCTNKYVRDKEN---IDEECKLLLGDRNLG---CPQFKN------VHKVRGHPSLQKG 226
K C N VR N I+E C + L C N V+ R H +L K
Sbjct: 228 KTLCINPKVRALGNSTAINERCLEIQRPETLAEQRCQFVLNKENETLVNDFRDH-TLAK- 285
Query: 227 GCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAI 286
V DIED+ +G + C YYA+RS+ +++V PY ++ R A+ + +K +
Sbjct: 286 ----VRDIEDIGKIGSKIGVCPYYASRSIIKYSEIVTLPYPLLLQRSAREALNISLKNHV 341
Query: 287 LILDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQVCSV-----------NPMIYQPLIE 335
+I+DEAHN+ D + S+ + L ++Q+ + Q+ + N + +I
Sbjct: 342 VIIDEAHNLMDAISNIHSMSLS---LTQVQLAIYQLTTYARKYKTRLSGRNRVYVTQVIR 398
Query: 336 MTQDLVGW----IERRKATLAKREFQHFFSCWTGDKALRELQEANISRQCFPILLECATK 391
+ + + +ER++ T + TG K + ++ +SR L
Sbjct: 399 LVNSISDYLKTVLERKQPTEGVLQPSDIM---TG-KGVDQINPHKLSRYLHESRLARKVD 454
Query: 392 AIKEATDTESELPHLSGMSVITLEGLFSSLTYFFS-RNGSHVSD--YQLALQKYIKRDSK 448
E + ES+ ++ +++ LF ++ S N S Y+++ +
Sbjct: 455 GFIEKSSMESQATTDKKVTQLSVPVLFQVQSFLISLMNPSSEGKLFYEISQNDVL----- 509
Query: 449 NPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGT----CL 504
L L+P F+++ E + ++IL GT+SPM+ + L
Sbjct: 510 ---------LKYMLLDPTNHFREIVEDARAVILAGGTMSPMDDYVEHLFPYLNADRLKTF 560
Query: 505 EAPHVIDVDLQVLTSV-ISTGPDNYPLNASYKTADGYKLMEKLCNRWRETGQWSRLNAKK 563
HVI D LT++ +S G N + +Y + ++ L R R+
Sbjct: 561 SYGHVIPPD--NLTAIPVSKGAFNTEFDFTYGKRNDENMIIDL---GRTIAALCRVIPDG 615
Query: 564 PLFVEPKGGSQEDFEIVLKHYY-----NSISQGSKCAVVRKKRVKREGNND--LNTIESQ 616
+ P ++ K N I K VV + + N D L S
Sbjct: 616 VVVFFPSYDYLNQVLVIWKKQAPNTRSNIIDSIEKSKVVFHESQDKTTNIDGLLQDYSSA 675
Query: 617 ENANKKGASFL----------------AVCRGKIVVGIPFPNIND------IQVSLKKKY 654
N +G + L + RG IVVG+PFPNI IQ K Y
Sbjct: 676 INGGSRGGALLLSVMGGKLSEGINFSDKLGRGVIVVGLPFPNIRSAVWQAKIQYVEHKAY 735
Query: 655 -------------------NDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGA 695
++ R K +G +Y N R +NQ IGR IRH+ DY A
Sbjct: 736 ESASPLSSSLDQDRKGQGFSEESRKLKAKAAGRVFYENACMRTVNQCIGRAIRHQGDYAA 795
Query: 696 IILLDERFQEERNRAHISKWLRKSIKQYDS---FDASLEGLKSFFR 738
I+++D R+ R ++ + W+R+++ S + ++ + FFR
Sbjct: 796 ILMMDRRYGSPRIQSKLPNWIRQNLAAGTSEQPVERTIGDISGFFR 841
>gi|261188545|ref|XP_002620687.1| ATP-dependent RNA helicase chl1 [Ajellomyces dermatitidis SLH14081]
gi|239593171|gb|EEQ75752.1| ATP-dependent RNA helicase chl1 [Ajellomyces dermatitidis SLH14081]
Length = 851
Score = 122 bits (305), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 164/706 (23%), Positives = 274/706 (38%), Gaps = 145/706 (20%)
Query: 146 IFYASRTHSQISQVISEYKKTAY--RVPMAV-------------------------LASR 178
+FY SRTHSQ++Q E ++ VP V L SR
Sbjct: 168 VFYCSRTHSQLTQFAHELRRVKLPPSVPPEVDDHDATADSASHPDDTLEESMKHLSLGSR 227
Query: 179 KHYCTNKYVRDKEN---IDEECKLLLGDRNLG---CPQFKN------VHKVRGHPSLQKG 226
K C N VR N I+E C + L C N V+ R H +L K
Sbjct: 228 KTLCINPKVRALGNSTAINERCLEIQRPETLAEQRCQFVLNKENETLVNDFRDH-TLAK- 285
Query: 227 GCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAI 286
V DIED+ +G + C YYA+RS+ +++V PY ++ R A+ + +K +
Sbjct: 286 ----VRDIEDIGKIGSKIGVCPYYASRSIIKYSEIVTLPYPLLLQRSAREALNISLKNHV 341
Query: 287 LILDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQVCSV-----------NPMIYQPLIE 335
+I+DEAHN+ D + S+ + L ++Q+ + Q+ + N + +I
Sbjct: 342 VIIDEAHNLMDAISNIHSMSLS---LTQVQLAIYQLTTYARKYKTRLSGRNRVYVTQVIR 398
Query: 336 MTQDLVGW----IERRKATLAKREFQHFFSCWTGDKALRELQEANISRQCFPILLECATK 391
+ + + +ER++ T + TG K + ++ +SR L
Sbjct: 399 LVNSISDYLKTVLERKQPTEGVLQPSDIM---TG-KGVDQINPHKLSRYLHESRLARKVD 454
Query: 392 AIKEATDTESELPHLSGMSVITLEGLFSSLTYFFS-RNGSHVSD--YQLALQKYIKRDSK 448
E + ES+ ++ +++ LF ++ S N S Y+++ +
Sbjct: 455 GFIEKSSMESQATTDKKVTQLSVPVLFQVQSFLISLMNPSSEGKLFYEISQNDVL----- 509
Query: 449 NPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGT----CL 504
L L+P F+++ E + ++IL GT+SPM+ + L
Sbjct: 510 ---------LKYMLLDPTNHFREIVEDARAVILAGGTMSPMDDYVEHLFPYLNADRLKTF 560
Query: 505 EAPHVIDVDLQVLTSV-ISTGPDNYPLNASYKTADGYKLMEKLCNRWRETGQWSRLNAKK 563
HVI D LT++ +S G N + +Y + ++ L R R+
Sbjct: 561 SYGHVIPPD--NLTAIPVSKGAFNTEFDFTYGKRNDENMIIDL---GRTIAALCRVIPDG 615
Query: 564 PLFVEPKGGSQEDFEIVLKHYY-----NSISQGSKCAVVRKKRVKREGNND--LNTIESQ 616
+ P ++ K N I K VV + + N D L S
Sbjct: 616 VVVFFPSYDYLNQVLVIWKKQAPNTRSNIIDSIEKSKVVFHESQDKTTNIDGLLQDYSSA 675
Query: 617 ENANKKGASFL----------------AVCRGKIVVGIPFPNIND------IQVSLKKKY 654
N +G + L + RG IVVG+PFPNI IQ K Y
Sbjct: 676 INGGSRGGALLLSVMGGKLSEGINFSDKLGRGVIVVGLPFPNIRSAVWQAKIQYVEHKAY 735
Query: 655 -------------------NDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGA 695
++ R K +G +Y N R +NQ IGR IRH+ DY A
Sbjct: 736 ESASPLSSSLDQDRKGQGFSEESRKLKAKAAGRVFYENACMRTVNQCIGRAIRHQGDYAA 795
Query: 696 IILLDERFQEERNRAHISKWLRKSIKQYDS---FDASLEGLKSFFR 738
I+++D R+ R ++ + W+R+++ S + ++ + FFR
Sbjct: 796 ILMMDRRYGSPRIQSKLPNWIRQNLAAGTSEQPVERTIGDISGFFR 841
>gi|310798566|gb|EFQ33459.1| DNA repair helicase [Glomerella graminicola M1.001]
Length = 791
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 180/797 (22%), Positives = 320/797 (40%), Gaps = 152/797 (19%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+ + + V FPY + Y Q +MC + TLD GHC +LE P+GTGK++SLL +
Sbjct: 3 FFIDELPVIFPYPRIYPEQYAYMCDLKKTLDAG---GHC--VLEMPSGTGKTVSLLSLIV 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNK 136
A+QQ+ +L S + + E L + E G T++ K
Sbjct: 58 AYQQHNPEHRKLIYCSRTMSEIEKALAELKALMKYRAEELGEEEEFRGLGLTSR-----K 112
Query: 137 NVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE 196
N+ H + Q +K+ A++ +R T +V++K++ E
Sbjct: 113 NLC------------LHPSVKQ-----EKSG-----AIVDARCRSLTAGFVKEKKDRGES 150
Query: 197 CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMA 256
+ C N+ + H + G V E L+ G+ + C Y+ AR M
Sbjct: 151 VDV--------CVYHDNLDLLEPHNLIPNG----VWTFEGLLRYGEQHKQCPYFTARRMM 198
Query: 257 DDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLK- 314
++ Y Y+++P I + ++ K I++ DEAHNI+++ ++ S DI ED L K
Sbjct: 199 QFCNVIIYSYHYLLDPKIAERVSRELSKDCIVVFDEAHNIDNVCIESLSTDITEDSLRKA 258
Query: 315 ---LQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRE 371
Q ++ + + L Q LV + R A A++E + D L+E
Sbjct: 259 TRGAQNLERRIAEMRDTDQEQLQNEYQKLVEGL--RGADEARQEDAFMANPALPDDLLKE 316
Query: 372 LQEANISR-QCFPILLECATKAIK---EATDTESELP-----HLSGMSVITLEGL----- 417
NI R + F L+ + +K + T SE P HL + I + L
Sbjct: 317 AVPGNIRRAEHFVSFLKRFIEYLKTRMKVRHTISETPPSFLAHLKEYTFIEKKPLRFCAE 376
Query: 418 -FSSLTYFFSRNGSHVSDYQ--------------------LALQKYIKRDSKNPGGNWTH 456
+SL + +++ DYQ L L+ + ++ P
Sbjct: 377 RLTSLVR--TLELTNIEDYQPLQEVATFATLVATYEKGFLLILEPFESETAEVPNP---- 430
Query: 457 TLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQ- 515
L CL+ A+ K V + S+I+TSGT+SP+ + LG F T ++ + + + +
Sbjct: 431 VLHFTCLDAAIAIKPVFDRFSSVIITSGTMSPLEMYPKMLG--FSTVVQESYSMTLARRS 488
Query: 516 VLTSVISTGPDNYPLNASYK---------------------TADG-------YKLMEKLC 547
L +++ G D ++ S++ T DG Y ME +
Sbjct: 489 FLPMIVTRGSDQSSISTSFQVRNEPSVVRNYGTLLTEFAKITPDGMVVFFPSYLYMESII 548
Query: 548 NRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGN 607
+ W+ + K + VE + + L+ Y + G ++ R K
Sbjct: 549 SMWQGMNILEEVWKYKLILVETPDAQETS--LALETYRTACCNGRGAILLCVARGKVSEG 606
Query: 608 NDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKY-NDTYRSSKNLLS 666
D + ++ G R + +G+PF + + ++ +TYR +
Sbjct: 607 IDFD--------HQYG-------RTVLCIGVPFQYTESRILKARLEFLRETYR-----IR 646
Query: 667 GNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYD-- 724
N++ A R Q +GR +R + DYG ++L D RFQ + RA + KW+ + + D
Sbjct: 647 ENDFLSFDAMRHAAQCLGRVLRGKDDYGIMVLADRRFQ--KKRAQLPKWINQGLLDADTN 704
Query: 725 -SFDASLEGLKSFFRDV 740
S D ++ + F + +
Sbjct: 705 VSTDMAVSSARRFLKQM 721
>gi|156050655|ref|XP_001591289.1| hypothetical protein SS1G_07915 [Sclerotinia sclerotiorum 1980]
gi|206557752|sp|A7ERG1.1|CHL1_SCLS1 RecName: Full=ATP-dependent RNA helicase CHL1; AltName:
Full=Chromosome loss protein 1
gi|154692315|gb|EDN92053.1| hypothetical protein SS1G_07915 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 902
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 162/665 (24%), Positives = 265/665 (39%), Gaps = 150/665 (22%)
Query: 175 LASRKHYCTNKYVRDKEN----IDEECKLLLGD---RNLGCPQFKNVHKVRGHPSLQKGG 227
L SRK+ C N V +K N I+E C L + CP N + +
Sbjct: 237 LGSRKNLCINPKV-NKLNSVTAINERCAELQQSSTPKEHKCPHLPNKDNKPLVSTFRDHA 295
Query: 228 CHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAIL 287
+ DIED+ +G+ + C YYA+RS A++V PY ++ R A+ + +KG ++
Sbjct: 296 LATIRDIEDMGALGKEISICPYYASRSAIKPAEIVTLPYPLLLQKSAREALGISLKGHVV 355
Query: 288 ILDEAHNIED-IARDAGS------VDIDEDVLLKLQMELEQVCSVNPMIY-QPLIEMTQD 339
I+DEAHN+ D IA G+ + + +++L M+ + IY I +
Sbjct: 356 IIDEAHNLMDAIAGIYGTEMSLKELKLAKEMLGNYFMKFAKRLKGKNRIYVAQAIRVVDS 415
Query: 340 LVGWIERR------KATLAKREFQHFFSCWTGD--KALRELQEANISRQCFPILLECATK 391
L+G++ +R + ++E D K +R LQE+ ++R+ T+
Sbjct: 416 LMGYLMKRLEGTEIDGVVDQKELLAGKGADQIDLFKLIRYLQESKLARKVESYTEH--TR 473
Query: 392 AIKEATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPG 451
IK+A S +PH + + + + +LT ++ QL K
Sbjct: 474 NIKQA----STIPHNNKETPKSTTPILHTLTSLLLALTHPTTEGQLFFLKSTSTSPSPSP 529
Query: 452 GNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFG----TCLEAP 507
TL LNPA F+ + + +IIL GT+SP + ++S L T L
Sbjct: 530 D--LITLKFQLLNPAPHFESIVSSARAIILAGGTMSPFSDYTSILFPSIPSHKITTLSCG 587
Query: 508 HVIDVDLQVLTSVISTGPDNYP---------------------LNASYKTADG------- 539
HVI + S +S GP P LN DG
Sbjct: 588 HVIP-KTHLFASTVSRGPTGIPFKWTFANRGNTDMMDELGRVLLNVCTIVPDGVVVFFPS 646
Query: 540 YKLMEKLCNRW----------------RETGQ----WSRLNAKKPLFVEPKGGSQEDFEI 579
Y + + R+ E G+ RL+ KKP+F E K +E E
Sbjct: 647 YNFLSTILYRFSIPSSGTGSATATATGTEKGKGKTILERLSEKKPIFQESK---EESVET 703
Query: 580 VLKHYYNSISQGSKC---AVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVV 636
+L Y SI++G +VV K EG N + A+ R ++V
Sbjct: 704 ILAAYAKSIAEGKGALLFSVVGGKL--SEGINFSD----------------ALGRCVMIV 745
Query: 637 GIPFPNIND---------IQVSLKKKYNDTYRSSKN------------------------ 663
G+PFPN++ I+ S ++ Y+ ++
Sbjct: 746 GLPFPNMHTAEWKRRLRFIEESAVERLTSFYQEKESNNKDGNGNEEEGNGKKKENREKIQ 805
Query: 664 ---LL-----SGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKW 715
+L +++ N RA+NQ +GR IRHR D+ I+LLDER++ ER ++ W
Sbjct: 806 RDQILQQAKGEARDYFENVCMRAVNQCVGRAIRHRGDWAGILLLDERYKGERVVGKLAGW 865
Query: 716 LRKSI 720
+R+ +
Sbjct: 866 IREGV 870
Score = 53.1 bits (126), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 35/58 (60%), Gaps = 5/58 (8%)
Query: 28 PYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCKLK 85
PY PY Q FM V L++ + +LESPTGTGKSLSL+C +L W ++ K K
Sbjct: 22 PYTPYPIQEKFMQTVYDVLEQGK-----IGILESPTGTGKSLSLICGSLTWLRDFKRK 74
>gi|403358712|gb|EJY79009.1| Fanconi anemia group J protein [Oxytricha trifallax]
Length = 965
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 106/368 (28%), Positives = 168/368 (45%), Gaps = 56/368 (15%)
Query: 418 FSSLTYFFSRNGSHVSDYQLALQ-KYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELS 476
F + + S + VSD+ + +Q K+ K + L+C N A FK + +
Sbjct: 422 FDQVKAYKSIDEFQVSDHYILIQRKHFKDLHLTTDQMIFKEMHLYCFNAAFTFKQIQRKN 481
Query: 477 -LSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYK 535
SIILTSG+LSP+++ S EL V+F + HVI + Q+L V + L++ Y
Sbjct: 482 PFSIILTSGSLSPISTVSYELDVKFDYIMTGGHVIQKN-QILPIVYPFCDNGLELSSKYD 540
Query: 536 TADGYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIV--LKHYYNSISQGSK 593
+K + + +L L +E GG F +K+ Y+ ++
Sbjct: 541 LPKEHKTII--------DENYGKLVRDACLTIE--GGILVFFSSYEKMKYSYDLWTKKMY 590
Query: 594 CAVVRKKR--VKREGNNDLN--TIES--------QENANKKGASFLAVCRGK-------- 633
A + K + + + N +LN TIES + K GA VCRG
Sbjct: 591 MASILKVKSFYQEQQNKELNNQTIESYLRDMRELDMQSKKNGAVLFGVCRGNFSEGYDFS 650
Query: 634 -------IVVGIPFPNINDIQVSLKKKYNDTYR-------------SSKNLLSGNEWYCN 673
I++G+PF I+D ++ +K + D YR + N +SG WY
Sbjct: 651 DYDARCVIIIGMPFACISDPKLLMKWHFLD-YRFNQMKENSQKIRDTDSNFISGKTWYEQ 709
Query: 674 QAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGL 733
Q RA+NQA+GR IRH+ DYG +IL DER++ +N+A + W+RK I +S +
Sbjct: 710 QTHRAINQAVGRVIRHKNDYGVVILADERYRLSKNQAMLPGWMRKQITVANSSKELRQHY 769
Query: 734 KSFFRDVK 741
+ F D+K
Sbjct: 770 QKFIYDLK 777
Score = 64.7 bits (156), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 71/168 (42%), Gaps = 56/168 (33%)
Query: 16 NAYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCST 75
+ + V GI+++FP PY Q +M + + + +A LE PTGTGK+LSLL ST
Sbjct: 96 HTFSVEGIEIKFPKIPYKVQEEYMTLAVKAIKNNK-----YAALEMPTGTGKTLSLLSST 150
Query: 76 LAWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNN 135
LA FI + S +
Sbjct: 151 LA---------------------------------FIDQYNQSNLST------------- 164
Query: 136 KNVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAV-LASRKHYC 182
+K + Y SRTHSQ+SQV E +K+ Y+ +V +ASR +YC
Sbjct: 165 ----QKQKLKLIYTSRTHSQLSQVRKEIRKSPYQYFKSVTIASRDYYC 208
>gi|448112560|ref|XP_004202128.1| Piso0_001608 [Millerozyma farinosa CBS 7064]
gi|359465117|emb|CCE88822.1| Piso0_001608 [Millerozyma farinosa CBS 7064]
Length = 795
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 174/807 (21%), Positives = 325/807 (40%), Gaps = 161/807 (19%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+++ + + FPY + Y Q +MC + TLD G+C +LE P+GTGK++SLL T+
Sbjct: 3 FYIDDLPILFPYPKIYPEQYSYMCDIKRTLDVG---GNC--ILEMPSGTGKTISLLSITV 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNK 136
A+Q + ++ S + + E L N + E G T++ K
Sbjct: 58 AYQMHYPEHRKVVYCSRTMSEIEKALIELHNLMKYRAEQLGYVEEFRGLGLTSR-----K 112
Query: 137 NVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRK-HYCTNKYVRDK-EN-- 192
N+ H IS + P V+ K TN ++ + EN
Sbjct: 113 NLC------------LHPSIS-----------KEPKGVVVDEKCRRITNGQLKQQIENGK 149
Query: 193 IDEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAA 252
+ EE + + C + ++ + H + G V+ + L+N + C Y+
Sbjct: 150 VSEEDQKRHPETKQLCSYHEELYDMEQHNLIPAG----VYSFDALINYCKARGTCPYFTV 205
Query: 253 RSMADDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDV 311
R M ++ Y Y+++P I + DI + +I+I DEAHNI+++ ++ S+D+ +D
Sbjct: 206 RRMIPYCNIIIYSYHYLLDPKIAERVSKDISRDSIIIFDEAHNIDNVCIESLSLDLTDDT 265
Query: 312 LLKLQMELEQVC-SVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDK-AL 369
L + ++ +++ M Q ++ + +E + + +RE + F S K L
Sbjct: 266 LQRATRGATKLGDAIDDMKSQDSEKLQNEYEKLVEGLRQSEIEREEELFMSNPILPKDLL 325
Query: 370 RELQEANISR--------QCFPILLECATKAIKEATDT-ESELPHLSGMSVITLEGL--- 417
E NI + + F L+ K + ++T S L HL ++ I + L
Sbjct: 326 DEAVPGNIRKGEHFISFLKRFIEYLKTRMKVLHVISETPTSFLQHLKDLTFIDRKPLRFC 385
Query: 418 ------------------FSSL---TYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTH 456
F++L F + ++ + +QL L+ + S P
Sbjct: 386 SERLSLLVRTLELTEIEDFTALKDIATFATLVSTYETGFQLILEPFETEGSSVPNP---- 441
Query: 457 TLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQ- 515
L CL+ ++ K V + S+I+TSGT+SP++ + L F T ++ + I + +
Sbjct: 442 ILHFTCLDASIAIKPVFDRFSSVIITSGTISPLDMYPRMLN--FQTVIQESYTITLARRS 499
Query: 516 VLTSVISTGPDNYPLNASYK---------------------TADG-------YKLMEKLC 547
L +++ G D +++ ++ T DG Y ME +
Sbjct: 500 FLPMIVTKGADQVSISSRFEIRNDPSVVRNYGSLLIEFSKITPDGMVVFFPSYLYMESII 559
Query: 548 NRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGN 607
+ W+ G + K + VE + + L+ + + S G
Sbjct: 560 SMWQNMGVLDEVWKYKLILVETPDAQETS--LALETFRKACSNG---------------- 601
Query: 608 NDLNTIESQENANKKGASFLAVCRGKIVVGIPFPN---INDIQVSLKKKYNDTYRSSKNL 664
+GA L+V RGK+ GI F + + + + +Y ++ L
Sbjct: 602 --------------RGAVLLSVARGKVSEGIDFDHHYGRTVLMIGIPFQYTESRILKARL 647
Query: 665 --------LSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWL 716
+ N++ A R Q +GR +R + DYG ++L D RF R ++ + KW+
Sbjct: 648 EFLRDHFQIRENDFLSFDAMRHAAQCLGRVLRGKDDYGIMVLADRRFS--RKKSQLPKWI 705
Query: 717 RKSIKQYD---SFDASLEGLKSFFRDV 740
+++ D S D +L K F R +
Sbjct: 706 AQALLDSDTNLSTDMALANAKKFLRSL 732
>gi|326475278|gb|EGD99287.1| DNA repair helicase RAD3 [Trichophyton tonsurans CBS 112818]
Length = 789
Score = 121 bits (303), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 185/855 (21%), Positives = 342/855 (40%), Gaps = 192/855 (22%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+ + + + FPY + Y Q +MC + LD GHC +LE P+GTGK+++LL +
Sbjct: 3 FFIDDLPILFPYPRIYPEQYAYMCDLKKVLDAG---GHC--VLEMPSGTGKTITLLALIV 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNK 136
A+QQ+ +L S + + E L + + G T++ K
Sbjct: 58 AYQQHYPEHRKLIYCSRTMSEIEKALSELRALMKYRSQKLGVVEDFRALGLTSR-----K 112
Query: 137 NVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE 196
N+ + P++ R S AV+ +R T ++++K+ E+
Sbjct: 113 NL--CLHPSV---KREKSG-----------------AVVDARCRSLTAGFIKEKKEKGED 150
Query: 197 CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMA 256
+L + NL + N+ + G V ++ L+ G+ + C Y++AR M
Sbjct: 151 VELCIYHENLDLLEPSNL--------VPPG----VFTLDGLLKYGEQHKQCPYFSARRMM 198
Query: 257 DDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLK- 314
++ Y Y+++P I + ++ + +I++ DEAHNI+++ ++ S+D+ ED L K
Sbjct: 199 PYCNVIIYSYHYLLDPKIAERVSKELSRDSIIVFDEAHNIDNVCIESLSIDLTEDSLRKA 258
Query: 315 ------LQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKA 368
L+ +++ + S + L Q LV + + + + D
Sbjct: 259 SRGANNLERKIDDMKSSDA---DKLQSEYQKLVEGLREADEAREEEQLMA--NPVLPDDL 313
Query: 369 LRELQEANISR-QCFPILLECATKAIK---EATDTESELP-----HLSGMSVI------- 412
L+E NI R + F L+ + +K + T T SE P HL ++ I
Sbjct: 314 LKESVPGNIRRAEHFVAFLKRFIEYLKTRMKVTHTISETPLSFLSHLKDLTFIERKPLRF 373
Query: 413 ----------TLEGL-------FSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWT 455
TLE + + F + ++ + L L+ + + P
Sbjct: 374 CAERLTSLVRTLELVNIEDYQPLQEVATFATLAATYEKGFLLILEPFESDTATVPNP--- 430
Query: 456 HTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQ 515
L CL+ A+ K V + S+I+TSGTLSP+ + LG F L+ + + + +
Sbjct: 431 -ILHFTCLDAAIAIKPVFDRFSSVIITSGTLSPLEMYPKMLG--FDAALQESYSMTLARR 487
Query: 516 -VLTSVISTGPDNYPLNASYK---------------------TADG-------YKLMEKL 546
L +++ G D +++S++ T DG Y ME +
Sbjct: 488 SFLPMIVTRGSDQAQISSSFQIRNDPGVVRNYGNMLLEFCRITPDGVVVFFPSYLYMESI 547
Query: 547 CNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREG 606
+ W+ G + K + VE SQE + L+ Y + G
Sbjct: 548 ISMWQGMGILDSVWNYKLILVETP-DSQES-SLALETYRTACCNG--------------- 590
Query: 607 NNDLNTIESQENANKKGASFLAVCRGKI---------------VVGIPFPNINDIQVSLK 651
+GA L V RGK+ +G+PF + +
Sbjct: 591 ---------------RGAVLLCVARGKVSEGIDFDHHYGRTVLCIGVPFQYTESRILKAR 635
Query: 652 KKY-NDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRA 710
++ + YR + N++ A R Q +GR +R + DYG ++L D RFQ++RN+
Sbjct: 636 LEFLRENYR-----IRENDFLSFDALRHAAQCLGRVLRGKDDYGVMVLADRRFQKKRNQ- 689
Query: 711 HISKWLRKSIKQYD---SFDASLEGLKSFFRDVKGWVGKKMFNGLENSDNDVDHVSSMDQ 767
+ KW+ +++ + + S D ++ KSF K M + D + S++
Sbjct: 690 -LPKWISQAMLESETNLSTDMAVATAKSFL--------KSMAQPFKAKDQEGISTWSLED 740
Query: 768 CKEVTKQNTQELNKS 782
K ++ QE+ K+
Sbjct: 741 LKRHLEKQKQEVEKT 755
>gi|42570705|ref|NP_973426.1| DNA repair DEAD helicase RAD3/XP-D subfamily protein [Arabidopsis
thaliana]
gi|330250867|gb|AEC05961.1| DNA repair DEAD helicase RAD3/XP-D subfamily protein [Arabidopsis
thaliana]
Length = 146
Score = 121 bits (303), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 61/109 (55%), Positives = 74/109 (67%), Gaps = 4/109 (3%)
Query: 67 KSLSLLCSTLAWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNG 126
+S + CS LAWQQN K + N++HSK EA TDPL +GGGFIPE+Q P S N
Sbjct: 22 QSFNTSCSVLAWQQNYKSRLLKGNLTHSKAAPEAATDPLNHGGGFIPETQQRDTPASINV 81
Query: 127 QTAQVAMNNKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVL 175
+ A+ A K+ PTI+YASRTHSQI+QVI EY+KT YRVPMAVL
Sbjct: 82 EKAETATK----KRTKIPTIYYASRTHSQITQVIREYRKTGYRVPMAVL 126
>gi|327294313|ref|XP_003231852.1| DNA repair helicase RAD3 [Trichophyton rubrum CBS 118892]
gi|326465797|gb|EGD91250.1| DNA repair helicase RAD3 [Trichophyton rubrum CBS 118892]
Length = 790
Score = 121 bits (303), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 189/859 (22%), Positives = 347/859 (40%), Gaps = 200/859 (23%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+ + + + FPY + Y Q +MC + LD GHC +LE P+GTGK+++LL +
Sbjct: 3 FFIDDLPILFPYPRIYPEQYAYMCDLKKVLDAG---GHC--VLEMPSGTGKTITLLALIV 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNK 136
A+QQ+ +L S + + E L + + G T++ K
Sbjct: 58 AYQQHYPEHRKLIYCSRTMSEIEKALSELRALMKYRSQKLGVVEDFRALGLTSR-----K 112
Query: 137 NVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE 196
N+ + P++ R S AV+ +R T ++++K+ E+
Sbjct: 113 NL--CLHPSV---KREKSG-----------------AVVDARCRSLTAGFIKEKKEKGED 150
Query: 197 CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMA 256
+L + NL + N+ + G V ++ L+ G+ + C Y++AR M
Sbjct: 151 VELCIYHENLDLLEPSNL--------VPPG----VFTLDGLLKYGEQHKQCPYFSARRMM 198
Query: 257 DDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLK- 314
++ Y Y+++P I + ++ + +I++ DEAHNI+++ ++ S+D+ ED L K
Sbjct: 199 PYCNVIIYSYHYLLDPKIAERVSKELSRDSIIVFDEAHNIDNVCIESLSIDLTEDSLRKA 258
Query: 315 ------LQMELEQVCSVNP----MIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWT 364
L+ +++ + S + YQ L+E + +A A+ E Q +
Sbjct: 259 SRGANNLERKIDDMKSSDADRLQNEYQKLVEGLR---------EADEAREEEQLMANPVL 309
Query: 365 GDKALRELQEANISR-QCFPILLECATKAIK---EATDTESELP-----HLSGMSVI--- 412
D L+E NI R + F L+ + +K + T T SE P HL ++ I
Sbjct: 310 PDDLLKESVPGNIRRAEHFVAFLKRFIEYLKTRMKVTHTISETPLSFLSHLKDLTFIERK 369
Query: 413 --------------TLEGL-------FSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPG 451
TLE + + F + ++ + L L+ + + P
Sbjct: 370 PLRFCAERLTSLVRTLELVNIEDYQPLQEVATFATLAATYEKGFLLILEPFESDTATVPN 429
Query: 452 GNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVID 511
L CL+ A+ K V + S+I+TSGTLSP+ + LG F L+ + +
Sbjct: 430 P----ILHFTCLDAAIAIKPVFDRFSSVIITSGTLSPLEMYPKMLG--FDAALQESYSMT 483
Query: 512 VDLQ-VLTSVISTGPDNYPLNASYK---------------------TADG-------YKL 542
+ + L +++ G D +++S++ T DG Y
Sbjct: 484 LARRSFLPMIVTRGSDQAQISSSFQIRNDPGVVRNYGNMLLEFCRITPDGVVVFFPSYLY 543
Query: 543 MEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRV 602
ME + + W+ G + K + VE SQE + L+ Y + G
Sbjct: 544 MESIISMWQGMGILDSVWNYKLILVETP-DSQES-SLALETYRTACCNG----------- 590
Query: 603 KREGNNDLNTIESQENANKKGASFLAVCRGKI---------------VVGIPFPNINDIQ 647
+GA L V RGK+ +G+PF
Sbjct: 591 -------------------RGAVLLCVARGKVSEGIDFDHHYGRTVLCIGVPFQYTESRI 631
Query: 648 VSLKKKY-NDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEE 706
+ + ++ + YR + N++ A R Q +GR +R + DYG ++L D RFQ++
Sbjct: 632 LKARLEFLRENYR-----IRENDFLSFDALRHAAQCLGRVLRGKDDYGVMVLADRRFQKK 686
Query: 707 RNRAHISKWLRKSIKQYD---SFDASLEGLKSFFRDVKGWVGKKMFNGLENSDNDVDHVS 763
RN+ + KW+ +++ + + S D ++ KSF K M + D +
Sbjct: 687 RNQ--LPKWISQAMLESETNLSTDMAVATAKSFL--------KSMAQPFKAKDQEGISTW 736
Query: 764 SMDQCKEVTKQNTQELNKS 782
S++ K ++ QE+ K+
Sbjct: 737 SLEDLKHHLEKQKQEIEKT 755
>gi|225685122|gb|EEH23406.1| CHL1 helicase [Paracoccidioides brasiliensis Pb03]
Length = 844
Score = 121 bits (303), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 166/727 (22%), Positives = 288/727 (39%), Gaps = 175/727 (24%)
Query: 135 NKNVKKKMTPTIFYASRTHSQISQVISEYKKTAY--RVPMAV------------------ 174
N +++++ +FY SRTHSQ++Q E ++ +P V
Sbjct: 153 NVDIEQENEVQVFYCSRTHSQLTQFAHELRRVNLPPSIPPEVDDDKAAADAVSSGVDSLG 212
Query: 175 -------LASRKHYCTNKYVRDKEN---IDEECKLLLGDRNLGCPQFKNVHKVRGHPS-- 222
L SR C N VR N I+E C + P+ HK P+
Sbjct: 213 ETLKHLSLGSRNTLCINPKVRALGNPTAINERC------LEIQRPETPAEHKCSFVPNKE 266
Query: 223 -------LQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIR 275
+ +V DIED+ +G + C YYAARS+ ++++ PY ++ R
Sbjct: 267 NEVLVNDFRDHTLAKVLDIEDIGKIGSKIGVCPYYAARSIVKYSEIITLPYPLLLQRSAR 326
Query: 276 GAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQVCSV---------- 325
A+ + +K ++I+DEAHN+ D + SV + L +L++ L Q+ +
Sbjct: 327 EALNISLKHHVVIIDEAHNLMDAISNIHSVSVS---LSQLKLALYQLTTYARKYKTRLNG 383
Query: 326 -NPMIYQPLIEMTQDLVGWIER-----RKATLAKREFQHFFSCWTGD--------KALRE 371
N + +I + L ++ R R A R TG K R
Sbjct: 384 SNRVYVTQVIRLVNSLSEYLTRVLERNRPAEGVLRP----SDIMTGKGVDQINPHKLSRY 439
Query: 372 LQEANISRQCFPILLECAT--KAIKEATDTE-SELPHLSGMS--VITLEGLFSSLTYFFS 426
L ++ ++R+ + +T + + E+ + + S P L + +++L S FF
Sbjct: 440 LHKSKLARKVDGFIEHSSTESQGLAESKNAQRSSTPVLFQVQSFLLSLMNPSSEGKLFFE 499
Query: 427 RNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTL 486
+ V L KYI L+P F+++ E + ++IL GT+
Sbjct: 500 NTQNDV------LMKYI------------------LLDPTNHFREIVEDARAVILAGGTM 535
Query: 487 SPMNSFSSELGVQFG----TCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYK------- 535
SPM ++ L HVI D + ++ G N + +Y
Sbjct: 536 SPMEDYADHLFPYLSPERLRTYSYGHVIPSD-NLKAMPVTKGAFNTEFDFTYAKRNDESL 594
Query: 536 --------------TADG-------YKLMEKLCNRWRE---TGQWSRLNA---KKPLFVE 568
DG Y + ++ W++ Q S L++ K LF E
Sbjct: 595 IMGLGRTIAALCRVIPDGVVVFFPSYDYLNQVLTIWKKLLPNSQLSVLDSIQKSKVLFHE 654
Query: 569 PKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLA 628
+ + E+ L+ Y N+I+ GS + + + + +N +
Sbjct: 655 SQDKATNTDEL-LQGYSNAINAGSGGGALLLSVMGGKLSEGINFSDR------------- 700
Query: 629 VCRGKIVVGIPFPNINDI--QVSLKKKYNDTY---------RSSKNLL---SGNEWYCNQ 674
+ RG IVVG+PFPN+ Q ++ + TY S+ L +G E+Y N
Sbjct: 701 LGRGVIVVGLPFPNLRSAVWQAKIQHVEHKTYEREDGQGMSEESRKLTAKAAGREFYENS 760
Query: 675 AFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDS---FDASLE 731
R +NQ IGR IRH+ DY AII++D R+ R + + W+R+++ S + ++
Sbjct: 761 CMRTVNQCIGRAIRHQNDYAAIIMMDRRYGTPRIQNKLPNWIRQNLVAAASEQPIERTIG 820
Query: 732 GLKSFFR 738
+ +FFR
Sbjct: 821 DISAFFR 827
>gi|315056317|ref|XP_003177533.1| DNA repair helicase RAD3 [Arthroderma gypseum CBS 118893]
gi|311339379|gb|EFQ98581.1| DNA repair helicase RAD3 [Arthroderma gypseum CBS 118893]
Length = 790
Score = 121 bits (303), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 178/813 (21%), Positives = 330/813 (40%), Gaps = 184/813 (22%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+ + + + FPY + Y Q +MC + LD GHC +LE P+GTGK+++LL +
Sbjct: 3 FLIDDLPILFPYPRIYPEQYAYMCDLKKVLDAG---GHC--VLEMPSGTGKTITLLALIV 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNK 136
A+QQ+ +L S + + E + L + + G T++ K
Sbjct: 58 AYQQHYPEHRKLIYCSRTMSEIEKALNELRALMKYRSQKLGVVEDFRALGLTSR-----K 112
Query: 137 NVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE 196
N+ + P++ R S AV+ +R T ++++K+ E+
Sbjct: 113 NL--CLHPSV---KREKSG-----------------AVVDARCRSLTAGFIKEKKEKGED 150
Query: 197 CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMA 256
+L + NL + N+ + G V ++ L+ G+ + C Y++AR M
Sbjct: 151 VELCIYHENLDLLEPSNL--------VPPG----VFTLDGLIKYGEQHKQCPYFSARRMM 198
Query: 257 DDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLK- 314
++ Y Y+++P I + ++ + +I++ DEAHNI+++ ++ S+D+ ED L K
Sbjct: 199 PYCNVIIYSYHYLLDPKIAERVSKELSRDSIIVFDEAHNIDNVCIESLSIDLTEDSLRKA 258
Query: 315 ------LQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKA 368
L+ +++++ S + L Q LV + + Q + D
Sbjct: 259 GRGASNLERKIDEMKSSDA---DKLQNEYQKLVEGLREADEAREEE--QLMANPVLPDDL 313
Query: 369 LRELQEANISR-QCFPILLECATKAIK---EATDTESELP-----HLSGMSVI------- 412
L+E NI R + F L+ + +K + T T SE P HL ++ I
Sbjct: 314 LKESVPGNIRRAEHFVAFLKRFIEYLKTRMKVTHTISETPLSFLSHLKDLTFIERKPLRF 373
Query: 413 ----------TLEGL-------FSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWT 455
TLE + + F + ++ + L L+ + + P
Sbjct: 374 CAERLTSLVRTLELVNIEDYQPLQEVATFATLAATYEKGFLLILEPFESDTATVPNP--- 430
Query: 456 HTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQ 515
L CL+ A+ K V + S+I+TSGTLSP+ + LG F L+ + + + +
Sbjct: 431 -ILHFTCLDAAIAIKPVFDRFSSVIITSGTLSPLEMYPKMLG--FDAALQESYSMTLARR 487
Query: 516 -VLTSVISTGPDNYPLNASYK---------------------TADG-------YKLMEKL 546
L +++ G D +++S++ T DG Y ME +
Sbjct: 488 SFLPMIVTRGSDQAQISSSFQIRNDPGVVRNYGNMLLEFCRITPDGVVVFFPSYLYMESI 547
Query: 547 CNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREG 606
+ W+ G + K + VE SQE + L+ Y + G
Sbjct: 548 ISMWQGMGILDSVWNYKLILVETP-DSQES-SLALETYRTACCNG--------------- 590
Query: 607 NNDLNTIESQENANKKGASFLAVCRGKI---------------VVGIPFPNINDIQVSLK 651
+GA L V RGK+ +G+PF + +
Sbjct: 591 ---------------RGAVLLCVARGKVSEGIDFDHHYGRTVLCIGVPFQYTESRILKAR 635
Query: 652 KKY-NDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRA 710
++ + YR + N++ A R Q +GR +R + DYG ++L D RFQ++RN+
Sbjct: 636 LEFLRENYR-----IRENDFLSFDALRHAAQCLGRVLRGKDDYGVMVLADRRFQKKRNQ- 689
Query: 711 HISKWLRKSIKQYD---SFDASLEGLKSFFRDV 740
+ KW+ +++ + + S D ++ KSF + +
Sbjct: 690 -LPKWISQAMLESETNLSTDMAVATAKSFLKSM 721
>gi|241957053|ref|XP_002421246.1| 5' to 3' DNA helicase, putative; DNA repair helicase Rad3
homologue, putative; transcription initiation factor
TFIIH subunit, putative [Candida dubliniensis CD36]
gi|223644590|emb|CAX40578.1| 5' to 3' DNA helicase, putative [Candida dubliniensis CD36]
Length = 781
Score = 121 bits (303), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 181/856 (21%), Positives = 339/856 (39%), Gaps = 171/856 (19%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+++ + V FPY + Y Q +MC + TLD G+C +LE P+GTGK++SLL T+
Sbjct: 3 FYIDDLPVLFPYPRIYPEQYAYMCDIKKTLDVG---GNC--ILEMPSGTGKTVSLLSLTV 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNK 136
A+Q + ++ S + + E L F G T
Sbjct: 58 AYQMHYPEHRKIVYCSRTMSEIEKALIELHKLMEFRANELGEVEDFRGLGLT-------- 109
Query: 137 NVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKEN---I 193
SR + + IS+ +K V+ + TN +++K I
Sbjct: 110 -------------SRKNLCLHPTISKERKGV------VVDEKCRRITNGQLKEKIEKGVI 150
Query: 194 DEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAAR 253
EE ++ + N C + ++ + H + G V+ + L+ + C Y+ R
Sbjct: 151 TEEDQVRDPETNSLCSYHEKLYDLEPHNLVPSG----VYSFDALLKYCKEEGTCPYFTVR 206
Query: 254 SMADDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVL 312
M ++ Y Y+++P I + ++ K +I+I DEAHNI+++ ++ S+D+ ++ L
Sbjct: 207 RMIPFCNIIIYSYHYLLDPKIAERVSRELSKDSIVIFDEAHNIDNVCIESLSLDLTDETL 266
Query: 313 LK----------------------LQMELEQVCS---------------VNPMIYQPLIE 335
K LQ E EQ+ NP++ Q L++
Sbjct: 267 KKASRGANKLGEAIEDMKTQDSEKLQNEYEQLVEGLRQAEIARDQELFMANPVLPQDLLD 326
Query: 336 MTQDLVGWIERRKATLA--KREFQHFFSCWTGDKALRELQEANIS-RQCFPILLECATKA 392
+ + G I + + +A KR ++ T K L + E S Q L K
Sbjct: 327 --EAIPGNIRKGEHFIAFLKRFIEYL---KTRMKVLHVISETPTSFLQHLKELTYIERKP 381
Query: 393 IKEATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGG 452
++ ++ S L ++ I + F + ++ S +QL L+ Y S P
Sbjct: 382 LRFCSERLSLLVRTLELTEIEDFNALKDIATFATLVSTYDSGFQLILEPYETEGSTVPNP 441
Query: 453 NWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDV 512
L CL+ ++ K V + S+I+TSGT+SP++ + L +F T ++ + + +
Sbjct: 442 ----ILHFTCLDASIAIKPVFDRFSSVIITSGTISPLDMYPKML--KFETVIQESYAMTL 495
Query: 513 DLQ-VLTSVISTGPDNYPLNASYK---------------------TADG-------YKLM 543
+ L +++ G D +++ ++ T DG Y M
Sbjct: 496 ARRSFLPMIVTKGSDQVSISSRFEIRNDPSVVRNYGSLLIEFAKITPDGMVVFFPSYLYM 555
Query: 544 EKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVK 603
E + + W+ G + K + VE + + L+ Y + S G
Sbjct: 556 ESIISMWQNMGVLDEVWKHKLILVETPDAQETS--LALETYRKACSNG------------ 601
Query: 604 REGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPN---INDIQVSLKKKYNDTYRS 660
+GA L+V RGK+ GI F + + + + +Y ++
Sbjct: 602 ------------------RGAVLLSVARGKVSEGIDFDHHYGRTVLMIGIPFQYTESRIL 643
Query: 661 SKNL--------LSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHI 712
L + N++ A R Q +GR +R + DYG ++L D RF ++N+ +
Sbjct: 644 KARLEFMRDHFQIKENDFLSFDAMRHAAQCLGRVLRGKDDYGIMVLADRRFARKKNQ--L 701
Query: 713 SKWLRKSIKQYD---SFDASLEGLKSFFRDVKGWVGKKMFNGLE--NSDNDVDHVSSMDQ 767
KW+ +++ D S D +L K F R + K G+ N D ++ +
Sbjct: 702 PKWIAQALNDSDTNLSTDMALATAKKFLRSLAQPTNPKDSEGVSIWNIDQLQEYQKQFQK 761
Query: 768 CKEVTKQNTQELNKSD 783
+EV ++ ++++ D
Sbjct: 762 IEEVEEKEFMDIDEED 777
>gi|302816593|ref|XP_002989975.1| hypothetical protein SELMODRAFT_269587 [Selaginella moellendorffii]
gi|300142286|gb|EFJ08988.1| hypothetical protein SELMODRAFT_269587 [Selaginella moellendorffii]
Length = 752
Score = 121 bits (303), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 179/830 (21%), Positives = 314/830 (37%), Gaps = 219/830 (26%)
Query: 18 YHVGGIQVEFPYQ-PYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+ + G+ V FPY+ Y Q +M + LD GHC LLE PTGTGK+++LL
Sbjct: 3 FVIEGLTVYFPYEFIYREQYAYMVELKHALDAR---GHC--LLEMPTGTGKTITLLSLIT 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNK 136
++Q LAN S +K
Sbjct: 58 SYQ--------LANPSLAK----------------------------------------- 68
Query: 137 NVKKKMTPTIFYASRTHSQISQVISEYKK-----------TAYRVPMAVLASRKHYCTNK 185
+ Y +RT ++ +V+ E ++ + ++ L+SRK+ C +
Sbjct: 69 ---------LIYCTRTVHEMEKVLDELRRLHLYQEKEIGSSRAKILALGLSSRKNLCIHP 119
Query: 186 YV---RDKENIDEECKLLLGDRNLGCPQFK-NVHKVRGHPSLQKGGCHE-----VHDIED 236
V +E++D C+ L + ++ + +K G + V+ + D
Sbjct: 120 VVSSETSRESVDAGCRKLTASWVRAAAETNPDIETCSFYQGYEKQGSEQPLPPGVYTLHD 179
Query: 237 LVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNI 295
L G+ C Y+ AR M A +V Y Y+++P + G + ++ K I++ DEAHNI
Sbjct: 180 LRVYGRQRGWCPYFLARQMIQFANVVVYNYQYLLDPKVSGIISKEMQKECIVVFDEAHNI 239
Query: 296 EDIARDAGSVDIDEDVLLKLQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKRE 355
+++ +A SV++ ++ L + +N +I + L R LA++
Sbjct: 240 DNVCIEALSVNLRQN---NLDGASRNIHKLNQIISRFKETDANRLRQEYNRLVEGLAQQG 296
Query: 356 FQHFFSCWTGDKALRE--LQEA---NISR-QCFPILLECATKAIKEATDTES---ELPHL 406
H W + L E L+EA NI R + F L+ A + ++E DT++ E P
Sbjct: 297 NLHGSDNWLANPVLPEDILREAVPGNIRRAEHFVAFLQRAVQYLRERLDTDTVVKEGPVS 356
Query: 407 SGMSVITLEGL-----------------------------FSSLTYFFSRNGSHVSDYQL 437
++ T GL ++ F + G++ + +
Sbjct: 357 FTTTMSTAAGLDQKALKFCYDRLHSLLLTLEVTEIDEFLHVQTVCNFLTLVGTYTRGFSI 416
Query: 438 ALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELG 497
++ Y +R P L L CL+ ++ K V + S+++TSGTLSP++ + L
Sbjct: 417 IIEPYDERMPHIPDP----VLQLSCLDASLAIKPVFDRFQSVVITSGTLSPIDLYPRLLN 472
Query: 498 VQFGTCLEAPHVIDVDLQVLTS------VISTGPDNYPLNASY----------------- 534
P +I LT +++ G D P+++ +
Sbjct: 473 FN-------PVIIHSFTMTLTRDCLCPMILARGSDQLPVSSKFDMRSDPGVVRNYGRLLL 525
Query: 535 ----KTADG-------YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKH 583
DG Y M+ + N W E G + K +F+E +Q+ E L
Sbjct: 526 EMVATVPDGVVCFFVSYSYMDGIINSWNEMGILQEVMQHKLVFIE----TQDYVETTLA- 580
Query: 584 YYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNI 643
+ Q C +GA F +V RGK+ GI F
Sbjct: 581 -LENFRQACDCG--------------------------RGAVFFSVARGKVAEGIDFDRH 613
Query: 644 ND---------IQVSLKKKYN---DTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRF 691
Q +L K N + R + + G+ + A R Q +GR IR +
Sbjct: 614 YGRLVIMFGVPFQYTLSKILNARLEYLRDTFQIKEGD-FLTFDAVRQAAQCVGRVIRSKA 672
Query: 692 DYGAIILLDERFQEERNRAHISKWLRKSIKQYD---SFDASLEGLKSFFR 738
DYG +I D+R+ R + +W++ +++ S D ++ + F R
Sbjct: 673 DYGMMIFADKRYNLPNKRNKLPQWIQSQLREEHLNLSTDMAVHIAREFLR 722
>gi|405118752|gb|AFR93526.1| CHL1 helicase [Cryptococcus neoformans var. grubii H99]
Length = 853
Score = 120 bits (302), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 142/326 (43%), Gaps = 69/326 (21%)
Query: 463 LNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFG----TCLEAPHVIDVDLQVLT 518
LNP+ FK+V E + S+IL GT+ P+ F +L + L HVI + +LT
Sbjct: 545 LNPSERFKEVVEEARSVILAGGTMEPITDFLQQLFPSIPKDRLSTLSCSHVIPKE-NLLT 603
Query: 519 SVISTGPDNYPLNASYK---------------------TADG-------YKLMEKLCNRW 550
V+S GP + DG Y ++K+ W
Sbjct: 604 QVVSVGPRKSEFEFKFGNRNDEALLTDLGAVLQATIGVVPDGVVVFLPSYAFLDKVRALW 663
Query: 551 RETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDL 610
++G RL +K LF EP+ + D E +L+ Y +IS C
Sbjct: 664 TKSGLLQRLGERKQLFYEPQ--TSGDVETILRDYALAISS---CYA-------------- 704
Query: 611 NTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKKYN 655
T + + + K GA AV GK I+VG+PF N++ +++ + +Y
Sbjct: 705 -TSTAGQKSRKTGALMFAVVGGKLSEGINFSDNLGRCVIMVGLPFANVSSVELQERMRYV 763
Query: 656 DTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKW 715
+T + S E Y N RA+NQ+IGR IRH DY I+L+D+R+ R R + KW
Sbjct: 764 ETIPGASQGAS-REMYENLCMRAVNQSIGRAIRHANDYATILLVDKRYATSRIRNKLPKW 822
Query: 716 LRKSIKQYDSFDASLEGLKSFFRDVK 741
+ + +K F G+ +FF++ K
Sbjct: 823 IGEDVKVPQDFGGVARGVAAFFKEKK 848
>gi|145498283|ref|XP_001435129.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124402259|emb|CAK67732.1| unnamed protein product [Paramecium tetraurelia]
Length = 722
Score = 120 bits (302), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 183/803 (22%), Positives = 319/803 (39%), Gaps = 180/803 (22%)
Query: 18 YHVGGIQVEFPYQ-PYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+ + ++V FPY+ Y QL +M + TLD H +LE PTGTGK++SLL +
Sbjct: 3 FVIDDLEVIFPYKFLYKEQLEYMQALKQTLDE-----KGHGILEMPTGTGKTVSLLALII 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNK 136
A+ LA +P+T
Sbjct: 58 AY---------LA----QRPNT-------------------------------------- 66
Query: 137 NVKKKM--TPTIFYASRTHSQISQVISEYKKTAYR--VPMAVLASRKHYCTN-KYVRDKE 191
VKK + T T+ +T ++ V+ K L+SRK+ C N + K+
Sbjct: 67 -VKKLIYCTRTVVEMEKTLEEVRLVLKARKAEGLNDNFTAVGLSSRKNLCINPDVINQKD 125
Query: 192 NIDEECKLLLGD-----RNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRG 246
+D EC+ + +N C + N K G ++ H+V+ + DL G
Sbjct: 126 RVDAECRKRTAEWVKRGQNETCIFYDNYEK-SGKETIANLP-HDVYSLNDLRKNGAYSIQ 183
Query: 247 CSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVD-IKGAILILDEAHNIEDIARDAGSV 305
C Y+ AR M A +V Y Y+I+P + + D IK ++++ DEAHNI+D+ +A +V
Sbjct: 184 CPYFTAREMVKKANIVVYNYLYLIDPTVSSQLTKDQIKESVVVFDEAHNIDDVCIEAYTV 243
Query: 306 DIDEDVLLK----LQMELEQVCSVNPMIYQPLIEMTQDLVGWIER--------------- 346
+++ +L + L++ Q+ S I L E + L+ +E+
Sbjct: 244 RLNKPILAEAINNLKVVETQIQSETNEIQNRLNEEYKKLIKNLEKKPEGELNQLVIPGQI 303
Query: 347 RKATLAKREFQHFFSCWTGD--KALRELQEANISRQCFPILLECATKAIKEATDTESELP 404
RKA R F F K L++ EA + + T+ I++ + + +
Sbjct: 304 RKA----RNFIDFMKRVINSLRKKLKDNSEALKTSHAILHNTKGFTEEIQKEGNLDIDSL 359
Query: 405 HLSGMSV-ITLEGLFSSLTYFFSRNGSHVSDYQLALQKY-----IKRDSKNPGGNWTHTL 458
G + + L L + T F R S V+ + + L +Y + S N G L
Sbjct: 360 KQCGERLNLLLNTLQIAETDKF-RPLSSVAQFVMYLVQYQEGFKVIFQSNNYEGTLNEKL 418
Query: 459 -SLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSF----------SSELGVQFGTCLEAP 507
+L C + ++ K++ S+ILTSGT+SP+ + + + ++ P
Sbjct: 419 MTLACFDSSLAMKNIFAQFQSVILTSGTMSPIEIYPKILDFKPVVAKSIDIELTRNSIQP 478
Query: 508 HVIDV--DLQVLTSV--------ISTGPDNYPLNASYKTADGYKLMEKLCNRWRETGQ-W 556
++ + D LTS +S N+ L S DG + +R E W
Sbjct: 479 IIVTMSEDGTELTSEFTLRNNEDVSRNYGNFLLELSENVPDGLIVFMPSYSRMEEWASIW 538
Query: 557 SRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQ 616
++ + K LF+E K ++ + Q KC V
Sbjct: 539 NKFSKNKVLFIESKDVAETS---------QKLQQYRKCCDV------------------- 570
Query: 617 ENANKKGASFLAVCRGKI---------------VVGIPFPNINDIQVSLKKKYNDTYRSS 661
+GA+ ++ RGKI V+G P N D + + K+ +
Sbjct: 571 ----GRGAALFSIARGKIAEGIDFEGHYGRCVAVIGFPALNSKDTLILERCKFLE----E 622
Query: 662 KNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIK 721
K ++ N++ A R Q +GR +R + DYG +I+ D+RF ++ + +W+ K +
Sbjct: 623 KFKITKNDFIEFDAMRQTCQCLGRVLRGKQDYGIMIMADKRFAQKSKLQKMPRWIYKQLD 682
Query: 722 QYDSFDASLEG----LKSFFRDV 740
Q + + E ++ FFR +
Sbjct: 683 QSRCLNITSETAITVVRDFFRQM 705
>gi|145353086|ref|XP_001420860.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581095|gb|ABO99153.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 788
Score = 120 bits (302), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 179/841 (21%), Positives = 320/841 (38%), Gaps = 221/841 (26%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+++ G++V FPY Q Y QL M +LD H +E PTGTGK++++L +
Sbjct: 3 FNLEGLRVFFPYPQIYPEQLAMMTEFKRSLD-----ARGHGAIEMPTGTGKTITVLSLCV 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNK 136
++Q I+H PE T + +V +
Sbjct: 58 SYQ-----------IAH-------------------PECGKLIYCTRTVPEMEKVLAECR 87
Query: 137 NVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRD---KENI 193
+++ F A+R ++ +++ L+SRK+ C N V D +E++
Sbjct: 88 TLER------FIAARAGEDVAAMLA-----------LGLSSRKNMCVNPRVVDEGSRESV 130
Query: 194 DEECKLLL-------------------------GDRNLGCPQFKNVHKVRGHPSLQKGGC 228
D +C+ L G+ N C +F + G ++ G
Sbjct: 131 DGKCRRLTASWVREKRLEREARGASENENVEDGGEGN--CCEFFEDFESAGEKAVLPPGV 188
Query: 229 HEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDI-KGAIL 287
+ +HD+ G+ + C Y+ AR+M A +V Y Y+++P + + + K I+
Sbjct: 189 YTLHDLRAF---GRTKKWCPYFLARNMISFANVVVYNYQYMLDPKVASLVSSSLEKECIV 245
Query: 288 ILDEAHNIEDIARDAGSVDIDEDVL----------------------LKLQMELEQVCSV 325
+ DEAHNI+++ +A SV++ + L +L+ E E++ V
Sbjct: 246 VFDEAHNIDNVCIEALSVNLRQQTLENAGRSITSLNTRIDRAKQTDERRLRQEYERL--V 303
Query: 326 NPMIYQPLIE--------MTQDLVGWIERRKATLAKREFQHFFSCWTG-----DKALREL 372
N + Q ++ M + I R R +HF + + LR
Sbjct: 304 NGLAQQGVLARGGGEDVLMNPIIPDDILREAVPGNIRRAEHFVAVLKRFVEYLNMRLRST 363
Query: 373 QEANISRQCFPILLECAT------KAIKEATDTESELPHLSGMSVITLEGL--FSSLTYF 424
Q + F L CA K +K D + L L + V+ ++ S + F
Sbjct: 364 QVEQETPTAF--LQHCAANAGIDGKTLKFCYDRLTSL--LKTLEVVDMDEFNALSLVANF 419
Query: 425 FSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSG 484
+ G++ + + L L+ Y +R P L L CL+ ++ K V E S+ +TSG
Sbjct: 420 AALVGTYSNGFALILEPYDERYPNIP----DPVLQLACLDASLAIKPVFERFQSVFITSG 475
Query: 485 TLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTAD------ 538
TLSP++ + LG + + D + VI+ G D ++ + D
Sbjct: 476 TLSPIDLYPKLLGFNPVSVRSLAMTLTRDC-LCPMVITRGADQQAVSTKFDMRDDPNVIQ 534
Query: 539 ----------------------GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQED 576
Y ME + ++W ETG + K +F+E +
Sbjct: 535 NYGRILIGLAQTVPDGIVAFFVSYSYMENIVSKWHETGILREIMQHKLVFIETTDVVETS 594
Query: 577 FEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVV 636
+ L +Y + + G +GA FL+V RGK+
Sbjct: 595 --LALDNYRRACNCG------------------------------RGAIFLSVARGKVAE 622
Query: 637 GIPFPNINDIQVSLKKKYNDTYRSS-KNLLSGNEWYCNQ----------AFRALNQA--- 682
GI F V + Y Y+ + +L Y + AF A+ QA
Sbjct: 623 GIDFDRHYGRAVVM---YGVPYQYTLSRILRARLEYLRETFQIKESDFLAFDAVRQAAQC 679
Query: 683 IGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYD---SFDASLEGLKSFFRD 739
+GR IR + DYG ++ D+R+ + R + W+ +++ S D +++ ++F R
Sbjct: 680 VGRVIRSKKDYGLMVFADKRYNSQDKRGKLPGWITTHLREEVLNLSTDMAMQVARTFMRS 739
Query: 740 V 740
+
Sbjct: 740 M 740
>gi|307686333|dbj|BAJ21097.1| excision repair cross-complementing rodent repair deficiency,
complementation group 2 [synthetic construct]
Length = 760
Score = 120 bits (302), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 186/803 (23%), Positives = 311/803 (38%), Gaps = 165/803 (20%)
Query: 20 VGGIQVEFPYQ-PYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
V G+ V FPY Y Q +M + TLD H +LE P+GTGK++SLL +A+
Sbjct: 5 VDGLLVYFPYDYIYPEQFSYMRELKRTLD-----AKGHGVLEMPSGTGKTVSLLALIMAY 59
Query: 79 QQNCKLK-NQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKN 137
Q+ L+ +L S + P+ E V + L F + + +P +++ N
Sbjct: 60 QRAYPLEVTKLIYCSRTVPEIEKVIEELRKLLNFYEKQEGEKLPFLGLALSSR---KNLC 116
Query: 138 VKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEEC 197
+ ++TP F + + H T YVR +
Sbjct: 117 IHPEVTPLRFGKD------------------------VDGKCHSLTASYVRAQYQ----- 147
Query: 198 KLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMAD 257
D +L +F G G +++++DL +G+ C Y+ AR
Sbjct: 148 ----HDTSLPHCRFYEEFDAHGREVPLPAG---IYNLDDLKALGRRQGWCPYFLARYSIL 200
Query: 258 DAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQ 316
A +V Y Y+++P I + ++ + A+++ DEAHNI+++ D+ SV++ L + Q
Sbjct: 201 HANVVVYSYHYLLDPKIADLVSKELARKAVVVFDEAHNIDNVCIDSMSVNLTRRTLDRCQ 260
Query: 317 MELE----QVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALREL 372
LE V + Q L + + LV + R+A+ A+ H + ++ L+E
Sbjct: 261 GNLETLQKTVLRIKETDEQRLRDEYRRLVEGL--REASAARETDAHLANPVLPNEVLQEA 318
Query: 373 QEANI-SRQCFPILLECATKAIK-----EATDTESELPHLSGMS---------------- 410
+I + + F L + +K + ES LSG++
Sbjct: 319 VPGSIRTAEHFLGFLRRLLEYVKWRLRVQHVVQESPPAFLSGLAQRVCIQRKPLRFCAER 378
Query: 411 ----VITLE----GLFSSLTYFFSRNGSHVSDYQLALQKYIK-RDSKNPGGNWTHTLSLW 461
+ TLE FS LT + + VS Y I+ D + P L
Sbjct: 379 LRSLLHTLEITDLADFSPLT-LLANFATLVSTYAKGFTIIIEPFDDRTPTIA-NPILHFS 436
Query: 462 CLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELG---VQFGT--------CLEAPHVI 510
C++ ++ K V E S+I+TSGTLSP++ + L V T CL P +I
Sbjct: 437 CMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMATFTMTLARVCL-CPMII 495
Query: 511 DV--DLQVLTSVISTGPD--------NYPLNASYKTADG-------YKLMEKLCNRWRET 553
D ++S T D N L S DG Y+ ME W E
Sbjct: 496 GRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFTSYQYMESTVASWYEQ 555
Query: 554 GQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTI 613
G + K LF+E + G++ + L+ Y + G
Sbjct: 556 GILENIQRNKLLFIETQDGAETS--VALEKYQEACENG---------------------- 591
Query: 614 ESQENANKKGASFLAVCRGKIVVGIPF-------------PNINDIQVSLKKKYNDTYRS 660
+GA L+V RGK+ GI F P + LK + Y
Sbjct: 592 --------RGAILLSVARGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLE--YLR 641
Query: 661 SKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSI 720
+ + N++ A R Q +GR IR + DYG ++ D+RF R + +W+++ +
Sbjct: 642 DQFQIRENDFLTFDAMRHAAQCVGRAIRGKTDYGLMVFADKRFARGDKRGKLPRWIQEHL 701
Query: 721 KQYD---SFDASLEGLKSFFRDV 740
+ + D ++ K F R +
Sbjct: 702 TDANLNLTVDEGVQVAKYFLRQM 724
>gi|426200162|gb|EKV50086.1| hypothetical protein AGABI2DRAFT_183219 [Agaricus bisporus var.
bisporus H97]
Length = 792
Score = 120 bits (302), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 172/804 (21%), Positives = 319/804 (39%), Gaps = 158/804 (19%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+ + + + FPY + Y Q +MC + TLD GHC +LE P+GTGK++SLL +
Sbjct: 3 FFIDNLPIIFPYDRIYPEQYAYMCDLKRTLDAT---GHC--VLEMPSGTGKTVSLLSLIV 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNK 136
++QQ K +L S + P+ E L + + +
Sbjct: 58 SYQQFYPTKRKLIYCSRTVPEIEKALTELKRLMKY---------------REEAAESEEE 102
Query: 137 NVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE 196
+K++ + SR + I+ +S KK V+ +R TN V +K D
Sbjct: 103 KIKERNYMGLGLTSRKNLCINPEVSREKKG------KVVDARCRDLTNSAVCEKGRADP- 155
Query: 197 CKLLLGDRNLGCPQFKNVHKVR-GHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSM 255
G L C +N+ K+ GH L G + + D+++ G+ R C Y+A R M
Sbjct: 156 -----GSVEL-CDWHENLGKMEPGH--LMPAG---IWTLADVLDYGKEQRICPYFAVRRM 204
Query: 256 ADDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVL-- 312
V + Y+++P + + ++ K +I++ DEAHNI+++ ++ S+D+ +L
Sbjct: 205 MPFVDAVIYSFHYLLDPKVAEQVSKEMSKDSIVVFDEAHNIDNVCIESLSIDLTRPMLDS 264
Query: 313 -----LKLQMELEQVCS-----------------------------VNPMIYQPL----- 333
KL ++E+V + NP++ + +
Sbjct: 265 AVRSVTKLGEKIEEVKTTDAAKLQDEYAKLVEGLQEPDDSDTDNALANPVLPEDILKEAI 324
Query: 334 ---IEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRELQEAN-ISRQCFPILLECA 389
I + V +++R L R T L+ L++ I R+ E
Sbjct: 325 PGNIRKAEHFVAFLKRFVEYLKTRMRVLHVVAETPLSFLQHLKDITYIERRPLRFCAERL 384
Query: 390 TKAIKEATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKN 449
I+ EL L S + F++L ++ + L L+ + ++
Sbjct: 385 QSLIRTL-----ELSRLDEHSSLQKVATFATLV------ATYEKGFLLILEPFETDNATV 433
Query: 450 PGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHV 509
P + T CL+P++ K V E S+++TSGT+SP++ + L QF ++ +
Sbjct: 434 PNPIFHFT----CLDPSLAIKPVFERFSSVVITSGTISPLDMYPKML--QFTPVVQETYS 487
Query: 510 IDVDLQV-LTSVISTGPDNYPLNASYK---------------------TADG-------Y 540
+ + L VI+ G D +++ ++ DG Y
Sbjct: 488 MTLTRNAFLPLVITRGSDQVAISSRFEVRNDPAVVRNFGSILVEYSKIVPDGIVAFFPSY 547
Query: 541 KLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKK 600
ME + W + G + + K +FVE ++ I L++Y + G ++
Sbjct: 548 LYMESIVAAWNDMGILNEVWKHKLIFVETPDANET--SIALENYRRACDNGRGAVLLSVA 605
Query: 601 RVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKY-NDTYR 659
R K D + + G R ++ G+P+ + + +Y D YR
Sbjct: 606 RGKVSEGIDFD--------HNYG-------RAVLMFGVPYQYTESRILKARLEYLRDAYR 650
Query: 660 SSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKS 719
+ +E+ A R Q +GR +R + D+G ++ D+RF RA + +W+ +
Sbjct: 651 -----IRESEFLGFDAMRNAAQCVGRVLRGKTDWGLMVFADKRFARADKRAKLPRWINQY 705
Query: 720 IKQYD---SFDASLEGLKSFFRDV 740
I + S D ++ K F R +
Sbjct: 706 ITETASNLSTDMAITLSKLFMRTI 729
>gi|213511929|ref|NP_001133411.1| TFIIH basal transcription factor complex helicase subunit [Salmo
salar]
gi|209153902|gb|ACI33183.1| TFIIH basal transcription factor complex helicase subunit [Salmo
salar]
Length = 760
Score = 120 bits (301), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 176/795 (22%), Positives = 318/795 (40%), Gaps = 147/795 (18%)
Query: 19 HVGGIQVEFPYQ-PYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLA 77
++ G+ V FPY Y Q +M + TLD H +LE P+GTGK++SLL +A
Sbjct: 4 NIEGLLVYFPYDYIYPEQYSYMLELKRTLD-----AKGHGVLEMPSGTGKTISLLSLIVA 58
Query: 78 WQQNCKLK-NQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNK 136
+Q+ L+ +L S + P+ E V + L F + N A + K
Sbjct: 59 YQREYPLEVTKLIYCSRTVPEIEKVVEELRKLMEFYSKET-----GEKNNILALALSSRK 113
Query: 137 NVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE 196
N+ H ++S + + K + + H T Y+R + +
Sbjct: 114 NLC------------VHPEVSSL--RFGKE--------VDGKCHSLTASYIRAQRQSNPS 151
Query: 197 CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMA 256
C ++ + L G V++++DL + G+ C YY AR
Sbjct: 152 LP--------SCRFYEEFDAMGKQVPLPAG----VYNLDDLKDFGRRKGWCPYYLARYSI 199
Query: 257 DDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLKL 315
A ++ Y Y+++P I + ++ K ++++ DEAHNI+++ D+ SV+I L +
Sbjct: 200 LHANIIVYSYHYLLDPKIADLVSKELSKKSVVVFDEAHNIDNVCIDSMSVNITRRTLDRS 259
Query: 316 QMELE-------------------------------------QVCSVNPMIYQPL----- 333
Q +E + NP++ +
Sbjct: 260 QANVETLQNTILKIKETDAAKLKEEYRRLVEGLKEANVARETDIYMSNPVLPDEILQEAV 319
Query: 334 ---IEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRELQE-ANISRQCFPILLECA 389
I + VG+++R L R H + + L+++ E I R+ P+ CA
Sbjct: 320 PGSIRTAEHFVGFMKRFLEYLKARLRIHHVVQESAPQFLKDIFEKVCIDRK--PLRF-CA 376
Query: 390 TKAIKEATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDS-- 447
+ ++ T E+ ++ S ITL F++L +S+ + + ++ + R
Sbjct: 377 ER-LRSLLRT-LEIADIADFSAITLISNFATLVSTYSKG------FTIIIEPFEDRTPTI 428
Query: 448 KNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAP 507
NP L C++P++ K V E S+I+TSGTLSP++ + L F A
Sbjct: 429 ANP------VLHFSCMDPSIAIKPVFERFQSVIITSGTLSPLDIYPRIL--DFRPVTVAS 480
Query: 508 HVIDVDLQVLTS-VISTGPDNYPLNASYKTADGYKLMEKLCNRWRETGQWSRLNAKKPLF 566
+ + L V+ G D + + ++T + + ++ N E ++A P
Sbjct: 481 FTMTLARTCLCPLVVGRGNDQVAMTSKFETREDFAVIRNYGNLLLE------MSAIVPDG 534
Query: 567 VEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNT---IESQENA--NK 621
+ S E ++ +Y QG V R K + E + T +E + A N
Sbjct: 535 IVAFFTSYTYMENIVASWYE---QGILENVQRNKLIFIETPDAAETSMALEKYQEACENG 591
Query: 622 KGASFLAVCRGKIVVGIPF-------------PNINDIQVSLKKKYNDTYRSSKNLLSGN 668
+GA L+V RGK+ GI F P + LK + Y + + N
Sbjct: 592 RGAILLSVARGKVSEGIDFVHHFGRAVIMFGVPYVYTQSRILKARLE--YLRDQFQIREN 649
Query: 669 EWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYD---S 725
++ A R Q +GR IR + DYG +I D+R+ R + +W+++ + +
Sbjct: 650 DFLTFDAMRHAAQCVGRAIRGKTDYGLMIFADKRYARADKRGKLPRWIQEHLTDGSLNLT 709
Query: 726 FDASLEGLKSFFRDV 740
D +++ K F R +
Sbjct: 710 IDETVQLSKHFLRQM 724
>gi|451850440|gb|EMD63742.1| hypothetical protein COCSADRAFT_37505 [Cochliobolus sativus ND90Pr]
Length = 798
Score = 120 bits (301), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 165/784 (21%), Positives = 320/784 (40%), Gaps = 126/784 (16%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+++ + V FPY + Y Q +MC + TLD+ GHC +LE P+GTGK++SLL +
Sbjct: 3 FYIDSLPVLFPYPRVYPEQYAYMCDLKRTLDQG---GHC--VLEMPSGTGKTVSLLSLII 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNK 136
A+QQ+ K +L S + + E L + +T ++ +
Sbjct: 58 AYQQHYPEKRKLIYCSRTMSEIEKALAELKALMKY---------------RTTELGYEEE 102
Query: 137 NVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE 196
+T SR + + + K V+ +R T +V++K+ E+
Sbjct: 103 FRGLGLT------SRKNLCLHPSVKREKSG------TVVDARCRSLTAGFVKEKKERGED 150
Query: 197 CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMA 256
+L C +N+ + H + G V + ++ G+ + C Y+ AR M
Sbjct: 151 VEL--------CVYHENLDLLEPHNLIPPG----VWTFDGILKYGEQQKQCPYFTARRMM 198
Query: 257 DDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLKL 315
++ Y Y+++P I + ++ K I++ DEAHNI+++ ++ S+D+ EDVL K
Sbjct: 199 PYCNVIIYSYHYLLDPKIADRVSKELSKDCIVVFDEAHNIDNVCIESLSIDLTEDVLRKA 258
Query: 316 QMELEQV-CSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFS-CWTGDKALRELQ 373
+ + + M ++ + +E +A R + F + D L E
Sbjct: 259 TKGVNNLDRKITEMKSSDAEKLQNEYAKLVEGLRAADEARNEEAFMANPALPDDLLTEAV 318
Query: 374 EANISR--------QCFPILLECATKAIKEATDTESE-LPHLSGMSVITLEGL------- 417
NI R + F L+ K + DT E L HL ++ I + L
Sbjct: 319 PGNIRRAEHFVAFLKRFIEYLKTRMKVLNVVADTPPEFLKHLKDLTFIERKPLRFCAERL 378
Query: 418 -----------------FSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSL 460
+ F + ++ + + L ++ + + P L L
Sbjct: 379 TSLVRTLELTNIEDYQPLQEVATFATLVATYETGFLLIIEPFESATATVPNP----VLHL 434
Query: 461 WCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQ-VLTS 519
CL+ A+ K V E S+I+TSGT+SP++ + L F T ++ + + + L
Sbjct: 435 TCLDAAIAIKPVFERFYSVIVTSGTMSPLDMYPRML--NFNTVVQESFTMTLTRKSFLPM 492
Query: 520 VISTGPDNYPLNASYKTADGYKLMEKLCNRWRE----TGQWSRLNAKKPLFVEPKGGSQE 575
++ G D + + ++ + ++ N E T + L++E + +
Sbjct: 493 IVDRGNDQNQVTSQFEHRNDLQVQRNFGNLLIEFCKLTPDGVVVFFPSYLYMESIISAWQ 552
Query: 576 DFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKI- 634
EI+ + + ++ + +E L T + N N +GA L V RGK+
Sbjct: 553 GMEILDTVWKYKL-------ILVETPDAQETALALETFRTACN-NGRGAVLLCVARGKVS 604
Query: 635 --------------VVGIPFPNINDIQVSLKKKY-NDTYRSSKNLLSGNEWYCNQAFRAL 679
+G+P+ + + ++ +TYR + ++ A R
Sbjct: 605 EGIDFDHHYGRTVLCMGVPYQYTESRILKARLEFLRETYR-----IKEADFLSFDAMRHA 659
Query: 680 NQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYD---SFDASLEGLKSF 736
Q +GR IR + DYG ++L D+RF + + + KW+++ + + S D ++ K+F
Sbjct: 660 AQCLGRVIRGKDDYGIMVLADKRFN--KKQTQLPKWIQQGLDAKNTKLSIDQAVGMAKNF 717
Query: 737 FRDV 740
+++
Sbjct: 718 LKEM 721
>gi|348557833|ref|XP_003464723.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit [Cavia porcellus]
Length = 760
Score = 120 bits (301), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 180/811 (22%), Positives = 311/811 (38%), Gaps = 181/811 (22%)
Query: 20 VGGIQVEFPYQ-PYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
V G+ V FPY Y Q +M + TLD H +LE P+GTGK++SLL +A+
Sbjct: 5 VDGLLVYFPYDYIYPEQFSYMLELKRTLD-----AKGHGVLEMPSGTGKTVSLLALIMAY 59
Query: 79 QQNCKLK-NQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKN 137
Q+ L+ +L S + P+ E V + L F + + + S G A + N
Sbjct: 60 QRAYPLEVTKLIYCSRTVPEIEKVIEELRKLLSFYEKQEGEKL--SFLG-LALSSRKNLC 116
Query: 138 VKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEEC 197
+ ++TP F + + H T YVR +
Sbjct: 117 IHPEVTPLRFGKD------------------------VDGKCHSLTASYVRAQYQ----- 147
Query: 198 KLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMAD 257
D ++ +F G G +++++DL +GQ C Y+ AR
Sbjct: 148 ----QDTSMPHCRFYEEFDAHGRQVPLPAG---IYNLDDLKALGQRQGWCPYFLARYSIL 200
Query: 258 DAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQ 316
A +V Y Y+++P I + ++ + A+++ DEAHNI+++ D+ SV++ L + Q
Sbjct: 201 HANVVVYSYHYLLDPKIADLVSKELARKAVVVFDEAHNIDNVCIDSMSVNLTRRTLDRCQ 260
Query: 317 MELE----QVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRE- 371
L+ V + Q L + + LV + R+A++A+ H + D+ L+E
Sbjct: 261 ANLDTLQKTVLRIKETDEQRLRDEYRRLVEGL--REASVARETDAHLANPVLPDEVLQEA 318
Query: 372 -------------------------LQEANISRQCFPILLECAT-------KAIKEATDT 399
L+ ++ ++ P L K ++ +
Sbjct: 319 VPGSIRTAEHFLGFLRRLLEFVKWRLRVQHVVQESPPAFLSSLAQRVCIQRKPLRFCAER 378
Query: 400 ESELPH------LSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGN 453
L H L+ S +TL F++L ++ + + ++ + D + P
Sbjct: 379 LRSLLHTLEIADLADFSPLTLLANFATLV------STYAKGFTIIIEPF---DDRTPTIA 429
Query: 454 WTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELG---VQFGT-------- 502
L C++ ++ K V E S+I+TSGTLSP++ + L V T
Sbjct: 430 -NPVLHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMATFTMTLARV 488
Query: 503 CLEAPHVIDV--DLQVLTSVISTGPD--------NYPLNASYKTADG-------YKLMEK 545
CL P +I D ++S T D N L S DG Y+ ME
Sbjct: 489 CL-CPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFTSYQYMES 547
Query: 546 LCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKRE 605
W E G + K LF+E + G++ + L+ Y + G
Sbjct: 548 TVASWYEQGILENIQRNKLLFIETQDGAETS--VALEKYQEACENG-------------- 591
Query: 606 GNNDLNTIESQENANKKGASFLAVCRGKIVVGIPF-------------PNINDIQVSLKK 652
+GA L+V RGK+ GI F P + LK
Sbjct: 592 ----------------RGAILLSVARGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKA 635
Query: 653 KYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHI 712
+ Y + + N++ A R Q +GR IR + DYG ++ D+RF R +
Sbjct: 636 RLE--YLRDQFQIRENDFLTFDAMRHAAQCVGRAIRGKTDYGLMVFADKRFARADKRGKL 693
Query: 713 SKWLRKSIKQYD---SFDASLEGLKSFFRDV 740
+W+++ + + + D ++ K F R +
Sbjct: 694 PRWIQEHLTDANLNLTVDEGVQVAKYFLRQM 724
>gi|410910536|ref|XP_003968746.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit-like [Takifugu rubripes]
Length = 760
Score = 120 bits (301), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 185/819 (22%), Positives = 311/819 (37%), Gaps = 197/819 (24%)
Query: 20 VGGIQVEFPYQ-PYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
+ G+ V FPY Y Q +M + TLD H +LE P+GTGK++SLL +A+
Sbjct: 5 IDGLLVYFPYDYIYPEQYSYMLELKRTLD-----AKGHGVLEMPSGTGKTISLLSLIVAY 59
Query: 79 QQNCKLK-NQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKN 137
Q+ L+ +L S + P+ E V + L + E S N ++ + KN
Sbjct: 60 QKAFPLEVTKLIYCSRTVPEIEKVVEELRK----LLEYHAKQTGQSNNFLALALS-SRKN 114
Query: 138 VKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEEC 197
+ H ++S A R V + H T Y+R + + D
Sbjct: 115 LC------------IHPEVS---------ALRFGKEV-DGKCHSLTASYIRAQRHSDPNV 152
Query: 198 KLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMAD 257
+ C F++ V L G +++++DL + G+ C YY AR
Sbjct: 153 PV--------CRYFEDFDAVGRQVPLPAG----IYNLDDLKDFGRRKGWCPYYLARYSIL 200
Query: 258 DAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVL---- 312
A +V Y Y+++P I + ++ K ++++ DEAHNI+++ D+ SV+I L
Sbjct: 201 HANIVVYSYHYLLDPKIADLVSKELAKKSVVVFDEAHNIDNVCIDSMSVNITRRTLDRCQ 260
Query: 313 ------------------LKLQMELEQVCS---------------VNPMIYQPL------ 333
KL+ E ++ NP++ +
Sbjct: 261 GNVDTLQKTIHKIKDTDAAKLKEEYRRLVEGLKEANIARETDVYLSNPVLPDEILREAVP 320
Query: 334 --IEMTQDLVGWIERRKATLAKR-EFQHFFSCWTGDKALRELQEANISRQCFPILLECAT 390
I + VG+++R L R QH T ++ I R+ P+ CA
Sbjct: 321 GTIRTAEHFVGFLKRFLEYLKSRLRVQHVVQESTPQFLKDIFEKVCIDRK--PLRF-CAE 377
Query: 391 KAIKEATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDS--K 448
+ ++ E+ ++ S +TL F++L +S+ + + ++ + R
Sbjct: 378 RL--QSLLRTLEIADIADFSAVTLIANFATLVSTYSQG------FTIIIEPFEDRTPTIA 429
Query: 449 NPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSP--------------MNSFSS 494
NP L C++P++ K V + S+++TSGTLSP M SF+
Sbjct: 430 NP------VLHFSCMDPSIAIKPVFQRFQSVVITSGTLSPLDIYPKILDFRPVTMASFTM 483
Query: 495 ELGVQFGTCLEAPHVIDV--DLQVLTSVISTGPD--------NYPLNASYKTADG----- 539
L TCL P +I D L+S T D N L S DG
Sbjct: 484 TLA---RTCL-CPLIIGRGNDQVALSSKFETREDFAVIRNYGNLLLEMSAIVPDGIVAFF 539
Query: 540 --YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVV 597
Y ME + W E G + K +F+E ++ + L+ Y + G
Sbjct: 540 TSYVYMENIVASWYEQGILENIQKNKLIFIETPDAAETS--MALEKYQEACENG------ 591
Query: 598 RKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPF-------------PNIN 644
+GA L+V RGK+ GI F P +
Sbjct: 592 ------------------------RGAILLSVARGKVSEGIDFVHHFGRAVIMFGVPYVY 627
Query: 645 DIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQ 704
LK + Y + N++ A R Q +GR IR + DYG +I D+R+
Sbjct: 628 TQSRILKARLE--YLRDHFQIRENDFLTFDAMRHAAQCVGRAIRGKTDYGLMIFADKRYA 685
Query: 705 EERNRAHISKWLRKSIKQYD---SFDASLEGLKSFFRDV 740
R + +W+++ I + D +++ K F R +
Sbjct: 686 RADKRGKLPRWIQEHISDGSLNLTIDETIQLSKHFLRQM 724
>gi|452000477|gb|EMD92938.1| hypothetical protein COCHEDRAFT_1133207 [Cochliobolus
heterostrophus C5]
Length = 799
Score = 120 bits (301), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 165/784 (21%), Positives = 320/784 (40%), Gaps = 126/784 (16%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+++ + V FPY + Y Q +MC + TLD+ GHC +LE P+GTGK++SLL +
Sbjct: 3 FYIDSLPVLFPYPRVYPEQYAYMCDLKRTLDQG---GHC--VLEMPSGTGKTVSLLSLII 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNK 136
A+QQ+ K +L S + + E L + +T ++ +
Sbjct: 58 AYQQHYPEKRKLIYCSRTMSEIEKALAELKALMKY---------------RTTELGYEEE 102
Query: 137 NVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE 196
+T SR + + + K V+ +R T +V++K+ E+
Sbjct: 103 FRGLGLT------SRKNLCLHPSVKREKSG------TVVDARCRSLTAGFVKEKKERGED 150
Query: 197 CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMA 256
+L C +N+ + H + G V + ++ G+ + C Y+ AR M
Sbjct: 151 VEL--------CVYHENLDLLEPHNLIPPG----VWTFDGILKYGEQQKQCPYFTARRMM 198
Query: 257 DDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLKL 315
++ Y Y+++P I + ++ K I++ DEAHNI+++ ++ S+D+ EDVL K
Sbjct: 199 PYCNVIIYSYHYLLDPKIADRVSKELSKDCIVVFDEAHNIDNVCIESLSIDLTEDVLRKA 258
Query: 316 QMELEQV-CSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFS-CWTGDKALRELQ 373
+ + + M ++ + +E +A R + F + D L E
Sbjct: 259 TKGVNNLDRKITEMKSSDAEKLQNEYAKLVEGLRAADEARNEEAFMANPALPDDLLTEAV 318
Query: 374 EANISR--------QCFPILLECATKAIKEATDTESE-LPHLSGMSVITLEGL------- 417
NI R + F L+ K + DT E L HL ++ I + L
Sbjct: 319 PGNIRRAEHFVAFLKRFIEYLKTRMKVLNVVADTPPEFLKHLKDLTFIERKPLRFCAERL 378
Query: 418 -----------------FSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSL 460
+ F + ++ + + L ++ + + P L L
Sbjct: 379 TSLVRTLELTNIEDYQPLQEVATFATLVATYETGFLLIIEPFESATATVPNP----VLHL 434
Query: 461 WCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQ-VLTS 519
CL+ A+ K V E S+I+TSGT+SP++ + L F T ++ + + + L
Sbjct: 435 TCLDAAIAIKPVFERFYSVIVTSGTMSPLDMYPRML--NFNTVVQESFTMTLTRKSFLPM 492
Query: 520 VISTGPDNYPLNASYKTADGYKLMEKLCNRWRE----TGQWSRLNAKKPLFVEPKGGSQE 575
++ G D + + ++ + ++ N E T + L++E + +
Sbjct: 493 IVDRGNDQNQVTSQFEHRNDLQVQRNFGNLLIEFCKLTPDGVVVFFPSYLYMESIISAWQ 552
Query: 576 DFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKI- 634
EI+ + + ++ + +E L T + N N +GA L V RGK+
Sbjct: 553 GMEILDTVWKYKL-------ILVETPDAQETALALETFRTACN-NGRGAVLLCVARGKVS 604
Query: 635 --------------VVGIPFPNINDIQVSLKKKY-NDTYRSSKNLLSGNEWYCNQAFRAL 679
+G+P+ + + ++ +TYR + ++ A R
Sbjct: 605 EGIDFDHHYGRTVLCMGVPYQYTESRILKARLEFLRETYR-----IKEADFLSFDAMRHA 659
Query: 680 NQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYD---SFDASLEGLKSF 736
Q +GR IR + DYG ++L D+RF + + + KW+++ + + S D ++ K+F
Sbjct: 660 AQCLGRVIRGKDDYGIMVLADKRFN--KKQTQLPKWIQQGLDAKNTKLSIDQAVGMAKNF 717
Query: 737 FRDV 740
+++
Sbjct: 718 LKEM 721
>gi|330947928|ref|XP_003307004.1| hypothetical protein PTT_20325 [Pyrenophora teres f. teres 0-1]
gi|311315183|gb|EFQ84891.1| hypothetical protein PTT_20325 [Pyrenophora teres f. teres 0-1]
Length = 796
Score = 120 bits (300), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 167/784 (21%), Positives = 317/784 (40%), Gaps = 126/784 (16%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+++ + V FPY + Y Q +MC + TLD+ GHC +LE P+GTGK++SLL +
Sbjct: 3 FYIDNLPVLFPYPRVYPEQYAYMCDLKRTLDQG---GHC--VLEMPSGTGKTVSLLSLIV 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNK 136
A+QQ+ K +L S + + E L + +T ++
Sbjct: 58 AYQQHYPEKRKLIYCSRTMSEIEKALAELKALMKY---------------RTTELGYEED 102
Query: 137 NVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE 196
+T SR + + + K V+ +R T +V++K+ E
Sbjct: 103 FRGLGLT------SRKNLCLHPSVKREKSG------TVVDARCRSLTAGFVKEKKERGEP 150
Query: 197 CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMA 256
+L C +N+ + H + G V + ++ G+ + C Y+ AR M
Sbjct: 151 VEL--------CVYHENLDLLEPHNLIPPG----VWTFDGMLKYGEQQKQCPYFTARRMM 198
Query: 257 DDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLKL 315
++ Y Y+++P I + ++ K I++ DEAHNI+++ ++ S+D+ EDVL K
Sbjct: 199 PHCNVIIYSYHYLLDPKIADRVSKELSKDCIVVFDEAHNIDNVCIESLSIDLTEDVLRKA 258
Query: 316 QMELEQV-CSVNPMIYQPLIEMTQDLVGWIE-RRKATLAKREFQHFFSCWTGDKALRELQ 373
+ + + M ++ + +E R A A+ E + D L E
Sbjct: 259 TKGVNNLDRKITEMKSSDAEKLQNEYAKLVEGLRAADEARNEDAFMANPALPDDLLTEAV 318
Query: 374 EANISR--------QCFPILLECATKAIKEATDTESE-LPHLSGMSVITLEGL------- 417
NI R + F L+ K + DT E L HL ++ I + L
Sbjct: 319 PGNIRRAEHFVAFLKRFIEYLKTRMKVLNVVADTPPEFLKHLRDLTFIERKPLRFCAERL 378
Query: 418 -----------------FSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSL 460
+ F + ++ + + L ++ + + P L L
Sbjct: 379 TSLVRTLELTNIEDYQPLQEVATFATLVATYETGFLLIIEPFESATATVPNP----VLHL 434
Query: 461 WCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQ-VLTS 519
CL+ A+ K V E S+I+TSGT+SP++ + L F T ++ + + + L
Sbjct: 435 TCLDAAIAIKPVFERFYSVIVTSGTMSPLDMYPRMLN--FNTVVQESFTMTLTRKSFLPM 492
Query: 520 VISTGPDNYPLNASYKTADGYKLMEKLCNRWRE----TGQWSRLNAKKPLFVEPKGGSQE 575
++ G D + + ++ + ++ N E T + L++E + +
Sbjct: 493 IVDRGNDQNQVTSQFEHRNDLQVQRNFGNLLIEFCKLTPDGVVVFFPSYLYMESIISAWQ 552
Query: 576 DFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGK-- 633
EI+ + + ++ + +E L T + N N +GA L V RGK
Sbjct: 553 GMEILDTVWKYKL-------ILVETPDAQETALALETFRTACN-NGRGAVLLCVARGKVS 604
Query: 634 -------------IVVGIPFPNINDIQVSLKKKY-NDTYRSSKNLLSGNEWYCNQAFRAL 679
I +G+P+ + + ++ +TYR + ++ A R
Sbjct: 605 EGIDFDHHYGRTVICMGVPYQYTESRILKARLEFLRETYR-----IKEADFLSFDAMRHA 659
Query: 680 NQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYD---SFDASLEGLKSF 736
Q +GR IR + DYG ++L D+RF + + + KW+++ + S D ++ K+F
Sbjct: 660 AQCLGRVIRGKDDYGIMVLADKRFN--KKQTQLPKWIQQGLDAKSTKLSIDQAVGAAKNF 717
Query: 737 FRDV 740
+++
Sbjct: 718 LKEM 721
>gi|388855689|emb|CCF50677.1| probable RAD3-DNA helicase/ATPase [Ustilago hordei]
Length = 847
Score = 120 bits (300), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 170/798 (21%), Positives = 313/798 (39%), Gaps = 150/798 (18%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+++ + V FPY + Y Q +M + TLD +GHC +LE P+GTGK++SLL +
Sbjct: 3 FYIDELPVLFPYPRIYPEQYAYMADLKRTLDA---NGHC--VLEMPSGTGKTVSLLSLIV 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNK 136
++QQ K +L S + P+ E L + GQ +QV N
Sbjct: 58 SYQQFHPAKRKLIYCSRTVPEIEKALAELKRLMEYRARYN------LKQGQQSQVLRNQA 111
Query: 137 ---NVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYV---RDK 190
N + + + +Q+ +++ L+SRK+ C + V R
Sbjct: 112 EQGNAPSEHHIQMEGRGKAGAQMQDILA-----------LGLSSRKNLCIHPDVSRERKG 160
Query: 191 ENIDEECKLLL-------GDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQV 243
+ +D C+ + G ++ G + + H+ G+ + V +E++ +
Sbjct: 161 KVVDARCRDMTSSWACEKGRQDPGSVELCDFHEELGNMEPGQLIPPGVWTLEEVKEYARD 220
Query: 244 VRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDA 302
R C Y+A R M ++ + Y+++P + + ++ K AI+I DEAHNI+++ ++
Sbjct: 221 KRICPYFAVRRMIPFVDIIIYSFHYLLDPKVAEQVSKEMSKDAIVIFDEAHNIDNVCIES 280
Query: 303 GSVDIDEDVLLKLQMELEQVCSVNPMIYQPLIEMTQD-LVGWIERRKATLAKREFQHFFS 361
S+D+ +L + Q+ I + QD ++ + +RE + F +
Sbjct: 281 LSIDLTRPMLDSAYRSINQLSERVDQIKKTDASKLQDEYARLVQGLQEQGDQREAETFMA 340
Query: 362 -CWTGDKALRELQEANISR-QCFPILLECATKAIKE--------ATDTESELPHLSGMSV 411
D L E NI R + F L+ + +K A S L HL ++
Sbjct: 341 NPVLPDDLLSEAIPGNIRRAEHFVAFLKRFVEYLKTRMRVLHVVAETPASFLQHLKDITY 400
Query: 412 I-----------------TLE-------GLFSSLTYFFSRNGSHVSDYQLALQKYIKRDS 447
I TLE + F + ++ + L L+ + ++
Sbjct: 401 IERKPLRFCAERLRMLVGTLELTRLDEYSALQKVAAFATLVATYDKGFLLILEPFETENA 460
Query: 448 KNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAP 507
P + T CL+ ++ V E S+I+TSGT+SP++ + L +F ++
Sbjct: 461 TVPNPIFHFT----CLDASLAIAPVFERFSSVIITSGTISPLDMYPKML--KFDAIIQES 514
Query: 508 HVIDVDLQ-VLTSVISTGPDNYPLNASYK---------------------TADG------ 539
+ + + Q L VI+ G D +++ ++ DG
Sbjct: 515 YAMTLTRQCFLPLVITRGSDQVAISSRFEVRNDPAVVRNYGSILIEYAKCVPDGIVAFFP 574
Query: 540 -YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVR 598
Y ME + W + G ++ K +F+E + I L++Y + G
Sbjct: 575 SYLYMESIVAAWHDMGILDQVWKYKLIFIETPDAPET--SIALENYRRACDNG------- 625
Query: 599 KKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNIND---IQVSLKKKYN 655
+GA L+V RGK+ GI F + I + +Y
Sbjct: 626 -----------------------RGAILLSVARGKVSEGIDFDHNYGRAVIMFGVPYQYT 662
Query: 656 DTYRSSKNL--------LSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEER 707
++ L + N++ A R Q +GR +R + DYG ++ D+RF
Sbjct: 663 ESRILKARLEFLRDNFRIRENDFLTFDAMRHAAQCVGRVLRGKTDYGLMVFADKRFARAD 722
Query: 708 NRAHISKWLRKSIKQYDS 725
R + KW+ + IK+ S
Sbjct: 723 KRNKLPKWIAQYIKETHS 740
>gi|29612643|gb|AAH49929.1| Ddx11 protein, partial [Mus musculus]
Length = 443
Score = 120 bits (300), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 95/334 (28%), Positives = 147/334 (44%), Gaps = 77/334 (23%)
Query: 457 TLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSEL----GVQFGTCLE--APHVI 510
+L LNPAV F V + ++++ GT+ PM+ F +L GV+ G +E HVI
Sbjct: 129 SLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPMSDFREQLLACSGVEAGRVVEFSCGHVI 188
Query: 511 DVDLQVLTSVISTGPDNYPLNASYKTADGYKLMEK-------LCN--------------- 548
D +L +I +GP N L +Y+ + ++ME+ LCN
Sbjct: 189 PPD-NILPLIICSGPSNQQLEFTYQRRELPQMMEETGRILCNLCNVVPGGVVCFLPSYEY 247
Query: 549 ------RWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRV 602
W +TG +RL+ +K +F EPK SQ E VL Y SKC +
Sbjct: 248 LRQVHAHWDKTGLLTRLSVRKKIFQEPKRASQ--VEQVLMAY-------SKCIMSC---- 294
Query: 603 KREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQ 647
S + GA L+V GK ++VG+P+PNI +
Sbjct: 295 ------------SHSEGHLTGALLLSVVGGKMSEGINFSDDLGRCVVMVGMPYPNIKSPE 342
Query: 648 VSLKKKY-NDTY-RSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQE 705
+ K Y N T R+ L G N +A+NQ+IGR IRH+ D+ +I+LLD R+
Sbjct: 343 LQEKMAYLNQTLPRTQGQPLPGTVLIENLCMKAINQSIGRAIRHQRDFASIVLLDHRYAR 402
Query: 706 ERNRAHISKWLRKSIKQYDSFDASLEGLKSFFRD 739
A + W+R ++ +F + ++ F R+
Sbjct: 403 PSILAKLPAWIRDRVEVKATFGPAFAAVRKFHRE 436
>gi|334328785|ref|XP_003341121.1| PREDICTED: LOW QUALITY PROTEIN: TFIIH basal transcription factor
complex helicase XPD subunit-like [Monodelphis
domestica]
Length = 807
Score = 119 bits (299), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 182/806 (22%), Positives = 310/806 (38%), Gaps = 163/806 (20%)
Query: 16 NAYHVGGIQVEFPYQ-PYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCS 74
A +V G+ V FPY Y Q +M + TLD H +LE P+GTGK++SLL
Sbjct: 48 QALNVDGLLVHFPYDYIYPEQFSYMLELKRTLD-----AKGHGVLEMPSGTGKTISLLAL 102
Query: 75 TLAWQQNCKLK-NQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAM 133
+A+Q+ L+ +L S + P+ E V + L + + +P +++
Sbjct: 103 IVAYQRVHPLEVTKLIYCSRTVPEIEKVIEELRKLMNSFEKQEGEKVPFLGLALSSR--- 159
Query: 134 NNKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENI 193
N + ++TP F + + + Y V A R+ + + R E
Sbjct: 160 KNLCIHPEVTPLRF-GKDVDGKCHSLTASY----------VRAQRQQDSSVPHCRFYEEF 208
Query: 194 DEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAAR 253
D + R + P +++++DL G+ C Y+ AR
Sbjct: 209 DAQ------GRQMPIPW-------------------GIYNLDDLKAFGRQKGWCPYFLAR 243
Query: 254 SMADDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVL 312
A ++ Y Y+++P I + ++ + A+++ DEAHNI+++ D+ SV++ L
Sbjct: 244 YSILHANVIVYSYHYLLDPKIADLVSKELARKAVVVFDEAHNIDNVCIDSMSVNLTRRTL 303
Query: 313 LKLQMELE----QVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKA 368
+ Q LE V + + L E + LV + R+A++A+ H + D+
Sbjct: 304 DRCQNNLETLQRTVHKIKETDEKRLREEYRRLVEGL--REASVARETDAHLANPVLPDEV 361
Query: 369 LRELQEANI-SRQCFPILLECATKAIKEATDT-----ESELPHLSGMS------------ 410
L+E +I + + F L + +K T ES L G++
Sbjct: 362 LQEAVPGSIRTAEHFLGFLRRLLEYVKWRLRTQHVVQESPPAFLGGLAHRVCIQRKPLRF 421
Query: 411 --------VITLE----GLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTL 458
+ TLE FS LT S + VS Y I+ + L
Sbjct: 422 CAERLRSLLHTLEIADLADFSPLT-LLSNFATLVSTYSRGFTIIIEPFDERTPTIANPVL 480
Query: 459 SLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELG---VQFGT--------CLEAP 507
C++ ++ K V E S+I+TSGTLSP+ + L V T CL P
Sbjct: 481 HFSCMDASLAIKPVFERFQSVIITSGTLSPLEIYPKILDFHPVTMATFTMTLARVCL-CP 539
Query: 508 HVIDV--DLQVLTSVISTGPD--------NYPLNASYKTADG-------YKLMEKLCNRW 550
++ D ++S T D N L S DG Y+ ME W
Sbjct: 540 MIVGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFTSYQYMESTVAAW 599
Query: 551 RETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDL 610
E G + K LF+E + G++ + L+ Y + G
Sbjct: 600 YEQGILENIQRNKLLFIETQDGAETS--VALEKYQEACENG------------------- 638
Query: 611 NTIESQENANKKGASFLAVCRGKIVVGIPF-------------PNINDIQVSLKKKYNDT 657
+GA L+V RGK+ GI F P + LK +
Sbjct: 639 -----------RGAILLSVARGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLE-- 685
Query: 658 YRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLR 717
+ + + N++ A R Q +GR IR + DYG ++ D+RF R + +W++
Sbjct: 686 FLRDQFQIRENDFLTFDAMRHAAQCVGRAIRGKTDYGLMVFADKRFARADKRGKLPRWIQ 745
Query: 718 KSIKQYD---SFDASLEGLKSFFRDV 740
+ + + + D ++ K F R +
Sbjct: 746 EHLTDANLNLTVDEGVQVAKYFLRQM 771
>gi|409082328|gb|EKM82686.1| hypothetical protein AGABI1DRAFT_118129 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 792
Score = 119 bits (298), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 171/804 (21%), Positives = 319/804 (39%), Gaps = 158/804 (19%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+ + + + FPY + Y Q +MC + TLD GHC +LE P+GTGK++SLL +
Sbjct: 3 FFIDNLPIIFPYDRIYPEQYAYMCDLKRTLDAT---GHC--VLEMPSGTGKTVSLLSLIV 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNK 136
++QQ K +L S + P+ E L + + +
Sbjct: 58 SYQQFYPTKRKLIYCSRTVPEIEKALTELKRLMKY---------------REEAAESEEE 102
Query: 137 NVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE 196
++++ + SR + I+ +S KK V+ +R TN V +K D
Sbjct: 103 KIRERNYMGLGLTSRKNLCINPEVSREKKG------KVVDARCRDLTNSAVCEKGRADP- 155
Query: 197 CKLLLGDRNLGCPQFKNVHKVR-GHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSM 255
G L C +N+ K+ GH L G + + D+++ G+ R C Y+A R M
Sbjct: 156 -----GSVEL-CDWHENLGKMEPGH--LMPAG---IWTLADVLDYGKEQRICPYFAVRRM 204
Query: 256 ADDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVL-- 312
V + Y+++P + + ++ K +I++ DEAHNI+++ ++ S+D+ +L
Sbjct: 205 MPFVDAVIYSFHYLLDPKVAEQVSKEMSKDSIVVFDEAHNIDNVCIESLSIDLTRPMLDS 264
Query: 313 -----LKLQMELEQVCS-----------------------------VNPMIYQPL----- 333
KL ++E+V + NP++ + +
Sbjct: 265 AVRSVTKLGEKIEEVKTTDAAKLQDEYAKLVEGLQEPDDSDTDNALANPVLPEDILKEAI 324
Query: 334 ---IEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRELQEAN-ISRQCFPILLECA 389
I + V +++R L R T L+ L++ I R+ E
Sbjct: 325 PGNIRKAEHFVAFLKRFVEYLKTRMRVLHVVAETPLSFLQHLKDITYIERRPLRFCAERL 384
Query: 390 TKAIKEATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKN 449
I+ EL L S + F++L ++ + L L+ + ++
Sbjct: 385 QSLIRTL-----ELSRLDEHSSLQKVATFATLV------ATYEKGFLLILEPFETDNATV 433
Query: 450 PGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHV 509
P + T CL+P++ K V E S+++TSGT+SP++ + L QF ++ +
Sbjct: 434 PNPIFHFT----CLDPSLAIKPVFERFSSVVITSGTISPLDMYPKML--QFTPVVQETYS 487
Query: 510 IDVDLQV-LTSVISTGPDNYPLNASYK---------------------TADG-------Y 540
+ + L VI+ G D +++ ++ DG Y
Sbjct: 488 MTLTRNAFLPLVITRGSDQVAISSRFEVRNDPAVVRNFGSILVEYSKIVPDGIVAFFPSY 547
Query: 541 KLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKK 600
ME + W + G + + K +FVE ++ I L++Y + G ++
Sbjct: 548 LYMESIVAAWNDMGILNEVWKHKLIFVETPDANET--SIALENYRRACDNGRGAVLLSVA 605
Query: 601 RVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKY-NDTYR 659
R K D + + G R ++ G+P+ + + +Y D YR
Sbjct: 606 RGKVSEGIDFD--------HNYG-------RAVLMFGVPYQYTESRILKARLEYLRDAYR 650
Query: 660 SSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKS 719
+ +E+ A R Q +GR +R + D+G ++ D+RF RA + +W+ +
Sbjct: 651 -----IRESEFLGFDAMRNAAQCVGRVLRGKTDWGLMVFADKRFARADKRAKLPRWINQY 705
Query: 720 IKQYD---SFDASLEGLKSFFRDV 740
I + S D ++ K F R +
Sbjct: 706 ITETASNLSTDMAITLSKLFMRTI 729
>gi|410076214|ref|XP_003955689.1| hypothetical protein KAFR_0B02570 [Kazachstania africana CBS 2517]
gi|372462272|emb|CCF56554.1| hypothetical protein KAFR_0B02570 [Kazachstania africana CBS 2517]
Length = 779
Score = 119 bits (298), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 181/823 (21%), Positives = 319/823 (38%), Gaps = 204/823 (24%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+ + + V FPY + Y Q +MC + TLD +++LE P+GTGK++SLL ++
Sbjct: 3 FFIDDLPVLFPYPKIYPEQYQYMCDIKKTLD-----AGGNSILEMPSGTGKTVSLLSLSV 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNK 136
A+Q + ++ S + + E L N
Sbjct: 58 AYQMHYPEHRKIIYCSRTMSEIEKTLVELEN----------------------------- 88
Query: 137 NVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYV---RDKENI 193
+ Y SR + E++ L SRK+ C + V R +
Sbjct: 89 --------LMDYRSRELG----YVEEFRGLG-------LTSRKNLCLHPVVSKERKGTVV 129
Query: 194 DEECKLL---LGDRNLG----------CPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNV 240
DE+C+ L + R L C +N++ + L KG V E L+
Sbjct: 130 DEKCRRLTNGVNKRKLQENPDATDAELCEYHENLYDMEVENYLPKG----VFSFEKLIKY 185
Query: 241 GQVVRGCSYYAARSMADDAQLVFCPYSYIINPVI--RGAMEVDIKGAILILDEAHNIEDI 298
+ C Y+ R M ++ Y Y+++P I R + EV K +I+I DEAHNI+++
Sbjct: 186 AEEKTICPYFIVRRMISLCNIIVYSYHYLLDPKIAERVSNEVS-KDSIVIFDEAHNIDNV 244
Query: 299 ARDAGSVDIDEDVLLK-------LQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATL 351
++ S+D+ DVL + L+ +E+V + Q E + + G T+
Sbjct: 245 CIESLSLDLTNDVLRRATKGANALEGRIEEVRKADSKKLQD--EYDKLVQGLHADDILTV 302
Query: 352 AKREFQHFFSCWTGDKALRELQEANISRQCFPI--------LLECATKAIKEATDT-ESE 402
A+ F + L+E NI R I L+ K + ++T +S
Sbjct: 303 AEEPFVE--TPVLSQDLLKEAIPGNIRRAEHFISFLKRLIEYLKTRMKVLHVISETPKSF 360
Query: 403 LPHLSGMSVI-----------------TLEGL----FSSL---TYFFSRNGSHVSDYQLA 438
L HL ++ I TLE F++L F + ++ + L
Sbjct: 361 LQHLKQLTFIDRKPLRFCSERLSLLVRTLEVTEVEDFTALKDIATFATLISTYEDGFTLI 420
Query: 439 LQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGV 498
++ Y ++ P + CL+ ++ K V E S+I+TSGT+SP++ + L
Sbjct: 421 IEPYEIENAAVPNP----IMRFSCLDASIAIKPVFEKFSSVIITSGTISPLDMYPRMLN- 475
Query: 499 QFGTCLEAPHVIDVDLQ-VLTSVISTGPDNYPLNASYK---------------------T 536
F T L+ + + +D + L +I+ G D +++ ++ T
Sbjct: 476 -FETILQKSYSMTLDKKSFLPMIITKGSDQVAISSRFEIRNDPSIVRNYGSMLVEFAKIT 534
Query: 537 ADG-------YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSIS 589
DG Y ME + + W+ G + K + VE + + L+ Y + S
Sbjct: 535 PDGMVVFFPSYLYMESIVSMWQTMGILDEVWKHKLILVETPDAQETS--LALETYRKACS 592
Query: 590 QGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPN---INDI 646
G +GA L+V RGK+ GI F + +
Sbjct: 593 NG------------------------------RGAILLSVARGKVSEGIDFDHHYGRTVL 622
Query: 647 QVSLKKKYNDTYRSSKNL--------LSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIIL 698
+ + +Y ++ L + N++ A R Q +GR +R + DYG ++L
Sbjct: 623 MIGIPFQYTESRILKARLEFLRENYQIRENDFLSFDAMRHAAQCLGRVLRGKDDYGVMVL 682
Query: 699 LDERFQEERNRAHISKWLRKSIKQYD---SFDASLEGLKSFFR 738
D RF ++N+ + KW+ + + D S D ++ K F R
Sbjct: 683 ADRRFSRKKNQ--LPKWIAQGLSDADLNLSTDMAISNTKQFLR 723
>gi|428672406|gb|EKX73320.1| conserved hypothetical protein [Babesia equi]
Length = 822
Score = 119 bits (298), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 160/375 (42%), Gaps = 68/375 (18%)
Query: 23 IQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNC 82
+ P++PY QL+FM D+++ L ESPTG+GK++++L + +AW
Sbjct: 10 LDFNLPFEPYKHQLLFMKDAYECFDKSR-----FGLFESPTGSGKTIAILAAMIAWLNKN 64
Query: 83 KLK--------NQLANISHSKPD---------TEAVTDPLANGGGFIPESQPSTIPPSTN 125
+++ N+ N S PD E + + N E S I +
Sbjct: 65 RVRGLMRKLDPNESQNADPSIPDWVRESAMAQKEKDAEDIINEDARELEELRSRIENKFD 124
Query: 126 GQTAQVAMNNKNVKKKMTPT---------------IFYASRTHSQISQVISEYKKTAYRV 170
+ + +++ + SRT SQ++Q +SE+++ +
Sbjct: 125 FSSGSIKFKGAFKRQRHELEFEDEQDINIAHPRLQVIICSRTFSQLNQYVSEFRRLNSKY 184
Query: 171 PMAVLASRKHYCTNKYVR---DKENIDEECKLLLGDRNLGCPQFKNVHKVR----GHPSL 223
+ ++A R C N+ VR E ++EEC R C K+V ++R +P
Sbjct: 185 KLGIIAGRFQVCINEKVRRCSTAEELNEEC------RRTSCAYRKDVKELRESILAYPL- 237
Query: 224 QKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIK 283
DIE++V +G+ + C YYA ++ PY I+N +R ++ +D+K
Sbjct: 238 ---------DIEEVVQIGKDMYACPYYAGVKNVAHMDIILVPYVSILNDSVRESLGIDLK 288
Query: 284 GAILILDEAHNIEDIARDAGSVDIDEDVLLKLQME----LEQVCSV----NPMIYQPLIE 335
G I++ DE HN+ D +A SV I L L ME L++ S + + +IE
Sbjct: 289 GNIIVFDEGHNLSDAIEEAQSVRISLKELQDLNMECKGYLKKFASTIQKDETEVLRLMIE 348
Query: 336 MTQDLVGWIERRKAT 350
M L G ++K
Sbjct: 349 MLNTLEGHANKQKTV 363
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 134/289 (46%), Gaps = 57/289 (19%)
Query: 478 SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTA 537
S+++ SGTLSP+ F L P+ ++++I T P +PLN + +
Sbjct: 558 SVLVMSGTLSPIEEFLR---------LVPPN--------MSALIHTSPPVFPLNRFFASI 600
Query: 538 -----DGYKLMEKLCNRWRETGQWSRLNAKKPLF--VEPKG----GSQEDFEIVLKHYYN 586
DG +L +R R+ + + L L + P G S F LK + +
Sbjct: 601 IDRDNDGNELKFDYTSRTRDM-ELTYLCKLLDLISSIVPNGIVCFFSSYKF---LKQFRS 656
Query: 587 SISQGS-KCAVVRKKRVKREGNNDLNTI-ESQENANKKGASFLAVCRGK----------- 633
+ + +++ +KR+ E + E + A ++GA V G+
Sbjct: 657 FLENSRFRISIMSRKRLFFEEQGHGSVFDEYSKTALERGAILFGVFGGRQSEGVNFSDGL 716
Query: 634 ----IVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRH 689
++VG+P+P + I+++LK++ + +L C ++ +NQ IGR +RH
Sbjct: 717 ARLVLLVGLPYPP-DSIKLALKRQDTGNHSGPPHL--DRTLLC---YKNVNQCIGRAMRH 770
Query: 690 RFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
R D+ A++LLD R++ ++ ++S ++++S++Q D L+SF+R
Sbjct: 771 RMDFAAVLLLDSRYR-GKDAKYLSGYVQESLRQRAVGDLE-SALESFYR 817
>gi|224002519|ref|XP_002290931.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220972707|gb|EED91038.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 1848
Score = 119 bits (298), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 105/361 (29%), Positives = 143/361 (39%), Gaps = 112/361 (31%)
Query: 454 WTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGV-----QFGTC----- 503
W TL L L P + + ++ +++L SG+LSP+ S +EL + G
Sbjct: 1183 WEATLHLNLLTPGPLMQQLSNECRTLVLASGSLSPLPSLCAELNLFPADASIGVSSPKPT 1242
Query: 504 --------------------LEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTADGYKLM 543
LEA HV+D+D Q+ I D L + K +
Sbjct: 1243 STQDILQPTVQKRLQNRPPPLEADHVVDLDKQLFAVSIGAFADGSELRVAQKNYSQNSFI 1302
Query: 544 EKL----------------------------CNR-WRETGQ-------WS---------- 557
EKL C R W G WS
Sbjct: 1303 EKLGDTIVNIISGIPKGGVLIFLPSYSLLRRCERLWNPNGYRNNRRSFWSQQEESDGPSV 1362
Query: 558 --RLNA-KKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKC---AVVRKKRVKREGNNDLN 611
RL K + VEP GG Q++FE Y S+ C AV R K + ND N
Sbjct: 1363 FDRLKQLKHNVIVEPTGG-QDEFEAKKDEYMESVKHFGGCVLFAVFRGKMSEGISFNDNN 1421
Query: 612 TIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYNDTYRSSK---NLLSGN 668
RG I VG+P P+ + + +K KYND R + +LL G
Sbjct: 1422 A------------------RGVICVGLPLPSAFSLPIQVKMKYNDEQRKLRHRTDLLPGR 1463
Query: 669 EWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERN------RAH--ISKWLRKSI 720
EWY QA+RA+ QA+GRCIRH DYGAI LLD R ++ + AH + KW+R+S+
Sbjct: 1464 EWYQQQAYRAIAQALGRCIRHAADYGAIFLLDSRHCDDGSPNDGIPNAHKNLPKWMRRSV 1523
Query: 721 K 721
K
Sbjct: 1524 K 1524
Score = 83.2 bits (204), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 95/215 (44%), Gaps = 54/215 (25%)
Query: 16 NAYHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCS 74
N++ V GI++ +P+ Q Q +I L ++ H +LESPTGTGKS ++LCS
Sbjct: 479 NSFFVEGIKIGWPFPQVMKPQRQMAIHLIKALKNSK-----HVVLESPTGTGKSAAILCS 533
Query: 75 TLAWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMN 134
LAWQ+ K L + T A G S+P +
Sbjct: 534 VLAWQR-FHYKQMLKERRDERSSTAADVAERNEGAA----SEPKKV-------------- 574
Query: 135 NKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKE--- 191
TI Y SRTHSQ++Q+++ K T YR MA+L SR+ C +K ++ +
Sbjct: 575 ----------TIVYCSRTHSQVAQMVASLKSTPYRPRMAILGSRERLCIHKSIKPRGKNA 624
Query: 192 ------NIDEECKLLLGDRNLGCPQFKNVHKVRGH 220
N++ EC++ + +N K R H
Sbjct: 625 EAVSGINVNNECRV----------RVRNTEKSRKH 649
Score = 82.8 bits (203), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 100/218 (45%), Gaps = 40/218 (18%)
Query: 247 CSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVD 306
C YY + +A DA+++F PY+Y+++P IR AM +D+ G+++ILDEAHN+ED R AGS +
Sbjct: 857 CPYYISHILAKDAEIIFAPYNYVLDPSIRDAMGLDLTGSVVILDEAHNVEDTLRSAGSGE 916
Query: 307 IDEDVLLKLQMELEQVC-----SVNPM----IYQP---------LIEMTQDLVGWIER-- 346
E L +L + L + N M I P L ++ L+ ++E+
Sbjct: 917 FGEFALCELIVMLNNYAITEKSTTNMMEVGGIAPPSGDSTETAYLCDVAHVLLLFVEKIA 976
Query: 347 RKATLAKREFQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHL 406
K AK+ F+ D LRE ++ DTE E+
Sbjct: 977 NKLRAAKQSFERNPGAKGADAVLRE------------------SEKFHSPDDTEYEV-TF 1017
Query: 407 SGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIK 444
G S L G FF + G D+++ L +Y++
Sbjct: 1018 DGPSGNGLRGKPVGCLPFFEQLGLTSDDFEM-LARYVE 1054
>gi|312088350|ref|XP_003145827.1| hypothetical protein LOAG_10252 [Loa loa]
Length = 554
Score = 119 bits (298), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 144/318 (45%), Gaps = 53/318 (16%)
Query: 457 TLSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQ 515
TL+ WC +P+V + + S+I+TSGTLSP++SF + LG+ F LE H ++D Q
Sbjct: 11 TLNYWCFSPSVAMWYLQSCGVRSVIVTSGTLSPLDSFVNSLGISFPITLENEHAANLD-Q 69
Query: 516 VLTSVISTGPDNYPLNASYKTA------------------------DGYKLMEKLCNRWR 551
+L + I L ++ Y +M W+
Sbjct: 70 ILGARIRFSQGGIDLCGTFHKRIYLWSWEVIIRACQIIPGGILVFFSSYVVMNSCLKFWK 129
Query: 552 -----ETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREG 606
T W + K F+EPK S+ + + VL + + +G + + +
Sbjct: 130 TAKFGATFMWEAITTHKEAFIEPK--SKLELKAVLLQFRQKVREGGGNGAILFAVCRAKV 187
Query: 607 NNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYNDTYRSS----- 661
+ ++ ++S+ RG IV+GIP+ + ++ LKK++ R+
Sbjct: 188 SEGIDFLDSES-------------RGVIVIGIPYAPTTNPRIELKKQFLTKERNGVAKKE 234
Query: 662 -KNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSI 720
K +S +EWY A R +NQAIGR +RH+ D+G +IL+D RF ++ S W+R+S+
Sbjct: 235 LKKNISADEWYQVDAIRGVNQAIGRVLRHKDDFGVVILVDSRFCSMPSKRFPS-WMRESL 293
Query: 721 KQYDSFDASLEGLKSFFR 738
K Y + K FF+
Sbjct: 294 KNYQNIGHFENDCKQFFK 311
>gi|402078170|gb|EJT73519.1| DNA repair helicase rad15 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 791
Score = 119 bits (298), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 171/798 (21%), Positives = 325/798 (40%), Gaps = 158/798 (19%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+++ + V FPY + Y Q +MC + TLD G+C +LE P+GTGK+ +LL +
Sbjct: 3 FYIDDLPVIFPYPRIYPEQYAYMCDLKRTLDAG---GNC--VLEMPSGTGKTATLLSLIV 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNK 136
A+QQ+ +L S + + E L + E G T++ K
Sbjct: 58 AYQQHNPEHRKLIYCSRTMSEIEKALAELRALMKYRAEQLGKEEDFRGLGLTSR-----K 112
Query: 137 NVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE 196
N+ + P + R S AV+ +R T ++++K++ E+
Sbjct: 113 NL--CLHPAV---KREKSG-----------------AVVDARCRSLTAGFIKEKKDKGED 150
Query: 197 CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMA 256
+ C N+ + H + G V + L+ G+ + C Y+ AR M
Sbjct: 151 VDV--------CVYHDNLDLLEPHNLIPNG----VWTFDGLLRYGEQHKQCPYFTARRMM 198
Query: 257 DDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLK- 314
++ Y Y+++P I + ++ + +I++ DEAHNI+++ ++ S D+ ED L K
Sbjct: 199 QYCNVIIYSYHYLLDPKIAERVSKELSRDSIIVFDEAHNIDNVCIESLSTDLTEDSLRKA 258
Query: 315 ------LQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKA 368
L+ ++Q+ + + L + Q LV + R A A++E + D
Sbjct: 259 TRGAQNLENRIKQMRETDQ---KQLEDEYQKLVAGL--RDADEARQEDAFMANPVLPDDL 313
Query: 369 LRELQEANISR--------QCFPILLECATKAIKEATDT-ESELPHLSGMSVITLEGL-- 417
+RE NI R + F L+ K ++ ++T S L HL + I + L
Sbjct: 314 IREAVPGNIRRAEHFVAFLKRFIEYLKTRLKVLEVISETPPSFLAHLKEYTFIEKKPLRF 373
Query: 418 ----------------------FSSLTYFFSRNGSHVSDYQLALQKY--IKRDSKNPGGN 453
+ F + ++ + L L+ Y +K NP +
Sbjct: 374 CAERLTSLVRTLELTNIEDFQPLQEVATFATLVATYEKGFLLLLEPYETVKSKVVNPVLH 433
Query: 454 WTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVD 513
+T CL+ A+ K V E ++I+TSGTLSP+ + LG F ++ + + +
Sbjct: 434 FT------CLDAAIAIKPVFERFKTVIITSGTLSPLEMYPKMLG--FDAIVQESYSMTLG 485
Query: 514 LQ-VLTSVISTGPDNYPLNASYK---------------------TADG-------YKLME 544
+ L +++ G D +++S+ T DG Y ME
Sbjct: 486 RRSFLPMIVTKGSDQAAISSSFAVRTDLPVVRNYGNLLTEFAKITPDGMVVFFPSYFYME 545
Query: 545 KLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKR 604
+ + W+ + K + VE ++ + L+ Y + G+ + R K
Sbjct: 546 SIISMWQGMNILEEVWKYKLILVETPDA--QETAVALETYRTACCNGTGAVMFCVARGKV 603
Query: 605 EGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKY-NDTYRSSKN 663
D + ++ G R + +G+P+ + + + ++ +TYR
Sbjct: 604 SEGIDFD--------HQYG-------RAVLCIGVPYQYTESLILKARLEFLRETYR---- 644
Query: 664 LLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQY 723
+ N++ A R Q +GR +R + DYG ++L D RF + R+ + KW+ +++ +
Sbjct: 645 -IKENDFLSFDAMRHAAQCLGRVLRGKDDYGIMVLADRRF--PKKRSQLPKWINQALLES 701
Query: 724 D---SFDASLEGLKSFFR 738
D S D ++ + F +
Sbjct: 702 DTNLSTDMAVSSARKFLK 719
>gi|126340221|ref|XP_001373024.1| PREDICTED: DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11
[Monodelphis domestica]
Length = 902
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 141/317 (44%), Gaps = 48/317 (15%)
Query: 457 TLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSEL------GVQFGTCLEAPHVI 510
+L LNP+V F V + ++I+ GT+ P+ F +L G + HVI
Sbjct: 595 SLRFLLLNPSVHFAQVVKECRAVIIAGGTMQPVADFREQLLECAGVGTERVVEFSCGHVI 654
Query: 511 DVDLQVLTSVISTGPDNYPLNASYKTADGYKLMEK-------LCN--------------- 548
D +L V+ +GP N PL Y+ D +LM++ LCN
Sbjct: 655 PPD-NILPIVLCSGPSNQPLEFIYQKRDLPQLMDEIGRILCNLCNVVPGGVVCFFPSYDY 713
Query: 549 ------RWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRV 602
W ++G +RL KK +F EP +Q E VL Y I +C+ VR
Sbjct: 714 LHKVQAHWAQSGLLTRLTVKKKIFQEPSRANQ--VEQVLTEYSKCIK---RCSQVRGVMT 768
Query: 603 KREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYNDTYRSSK 662
G L+ + + + + L C ++VG+P+PNI +++ K Y D R +
Sbjct: 769 ---GALLLSVVGGKMSEGINFSDDLGRC--VVMVGMPYPNIKSLELQEKMAYLDQTRPNS 823
Query: 663 NLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQ 722
G N +A+NQ+IGR IRHR D+ +I+LLD+R+ A + W+R +
Sbjct: 824 ---PGKSLIENLCMKAVNQSIGRAIRHRQDFASILLLDQRYSRPYILAKLPGWIRDQVSI 880
Query: 723 YDSFDASLEGLKSFFRD 739
+F + L+ F R+
Sbjct: 881 KATFGPAFAALRKFHRE 897
Score = 85.1 bits (209), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 95/205 (46%), Gaps = 38/205 (18%)
Query: 146 IFYASRTHSQISQVISEYKKTAY--RVPMAVLASRKHYCTNKYVRDKENIDEECKLLLGD 203
I+Y SRTHSQ++Q + E +K+ + + L SR++ C N+ V+ ++ L+ D
Sbjct: 227 IYYCSRTHSQLTQFVHEVQKSPFGKETRLISLGSRQNLCVNEEVKRLGSVH-----LIND 281
Query: 204 R---------------------------NLGCPQFKNVHKVRGHPSLQKGGCHEVHDIED 236
R + CP F N +++ L+ EV DIE
Sbjct: 282 RCLEMQKNKHGKKKNKEEEKAKKRKLENRMSCP-FYNYEQMQ---FLRDEVLMEVKDIEQ 337
Query: 237 LVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIE 296
LV +G+ R C YY +R AQLV PY +++ R A + ++G ++I+DEAHN+
Sbjct: 338 LVVLGKEARACPYYGSRFAIPSAQLVVLPYQMLLHAATRQAAGIKLQGQVVIIDEAHNLI 397
Query: 297 DIARDAGSVDIDEDVLLKLQMELEQ 321
D S ++ L + +L Q
Sbjct: 398 DTITSIHSAEVSGLQLCQAHSQLSQ 422
Score = 58.9 bits (141), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 40/67 (59%), Gaps = 5/67 (7%)
Query: 21 GGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQ 80
GGI FPY PY Q FM + L+ A + G + ESPTGTGKSLSL+C L+W +
Sbjct: 8 GGIHFPFPYTPYSIQKDFMTELYHVLE-AGKIG----IFESPTGTGKSLSLICGALSWLR 62
Query: 81 NCKLKNQ 87
+ + K Q
Sbjct: 63 DFEQKKQ 69
>gi|348564904|ref|XP_003468244.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8-like [Cavia porcellus]
Length = 908
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 96/337 (28%), Positives = 145/337 (43%), Gaps = 77/337 (22%)
Query: 457 TLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLE------APHVI 510
+L LNPAV F V + ++++ GT+ P++ F +L GT E HVI
Sbjct: 596 SLKFLLLNPAVQFAQVVKECRAMVIAGGTMQPVSDFREQLLAWAGTQSERVVEFSCGHVI 655
Query: 511 DVDLQVLTSVISTGPDNYPLNASYKTADGYKLMEK-------LCN--------------- 548
D +L V+ +GP L +++ + +ME+ LCN
Sbjct: 656 PPD-NILPLVLCSGPTGQQLEFTFQQRELPAMMEETGRILCNLCNVVPGGLVCFFPSYEY 714
Query: 549 ------RWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRV 602
W ++G +RL +K LF EPK SQ E VL Y SKC +
Sbjct: 715 QRQVLAHWDKSGLLARLTVRKKLFQEPKRASQ--VEQVLSAY-------SKC-------I 758
Query: 603 KREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQ 647
KR G Q GA L+V GK ++VG+P+PNI +
Sbjct: 759 KRCG---------QAGGPVTGALLLSVVGGKMSEGINFSDDLGRCVVMVGMPYPNIRSPE 809
Query: 648 VSLKKKYNDTY--RSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQE 705
+ K Y D RS + G N +A+NQ+IGR IRH+ D+ +I+LLD+R+
Sbjct: 810 LQEKMAYLDQRLPRSPGQVPPGKALLENLCMKAVNQSIGRAIRHQRDFASIVLLDQRYTR 869
Query: 706 ERNRAHISKWLRKSIKQYDSFDASLEGLKSFFRDVKG 742
A + W+R ++ +F A+ L+ F R+ G
Sbjct: 870 PPVLAKLPAWIRDRVEVKATFGAAFAALRKFHREKAG 906
Score = 83.6 bits (205), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 91/201 (45%), Gaps = 30/201 (14%)
Query: 146 IFYASRTHSQISQVISEYKKTAY--RVPMAVLASRKHYCTNKYVRDKENIDEECKLLLGD 203
I+Y SRTHSQ++Q + E +K+ + + L SR++ C N+ VR + L+ D
Sbjct: 229 IYYCSRTHSQLAQFVQEVQKSPFGKDTRLVTLGSRQNLCVNEDVRSLGAVQ-----LIND 283
Query: 204 RNLGCPQFKNVHKVRGHPSLQKGGCHE-----------------------VHDIEDLVNV 240
R + + + +K R K E D+E LV +
Sbjct: 284 RCMEMQRSPHENKNRAEAEKPKRRRQEGRTACPFYNREQTQLLRDEILVAARDMEQLVAL 343
Query: 241 GQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIAR 300
G+ R C YY +R AQLV PY +++ R A + ++G ++I+DEAHN+ D
Sbjct: 344 GREARACPYYGSRLAVPVAQLVVLPYPMLLHAATRQAAGIRLQGQVVIIDEAHNLIDTIT 403
Query: 301 DAGSVDIDEDVLLKLQMELEQ 321
D S ++ L + +L Q
Sbjct: 404 DIHSTEVSGSQLCQAHSQLLQ 424
Score = 57.8 bits (138), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 50/100 (50%), Gaps = 9/100 (9%)
Query: 22 GIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQN 81
GI FP+ PY Q FM ++ L+ + + ESPTGTGKSLSL+C L W ++
Sbjct: 10 GIDFPFPFPPYSIQKDFMAKLYHVLEAGK-----IGIFESPTGTGKSLSLICGALTWLRD 64
Query: 82 CKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIP 121
+ K Q ++ T PL G +P + PS+ P
Sbjct: 65 FEQKKQQ---EEARCLLAPGTQPLPEGQDLLPAA-PSSCP 100
>gi|342871641|gb|EGU74151.1| hypothetical protein FOXB_15338 [Fusarium oxysporum Fo5176]
Length = 761
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 190/867 (21%), Positives = 335/867 (38%), Gaps = 217/867 (25%)
Query: 43 ISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCKLKNQLANISHSKPDTEAVT 102
+ TLD GHC +LE P+GTGK++SLL +A+QQ
Sbjct: 1 MQTLDAG---GHC--VLEMPSGTGKTVSLLSLIVAYQQ---------------------- 33
Query: 103 DPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKKMTPTIFYASRTHSQISQVISE 162
++PE K+K+ Y SRT S+I + + E
Sbjct: 34 --------YMPE------------------------KRKL----IYCSRTMSEIEKALVE 57
Query: 163 YKK-TAYRVPMAV---------LASRKHYCTNKYVRDKEN---IDEECKLLL-------- 201
K YR L SRK+ C + V+ +++ +D C+ L
Sbjct: 58 LKSLMKYRAEQLGYEEEFRGLGLTSRKNLCLHPSVKREKSGAIVDARCRSLTAGFVKEKK 117
Query: 202 --GDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDA 259
G+ C N+ + H + G V +D++ G+ + C Y+ AR M
Sbjct: 118 ERGENVDVCVYHDNLDLLEPHNLIPNG----VWSFDDMIRYGEEHKQCPYFTARRMMQYC 173
Query: 260 QLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLK---- 314
+V Y Y+++P I + D K I++ DEAHNI+++ ++ S DI ED L K
Sbjct: 174 NVVIFSYHYLLDPKIAERVSKDFSKDCIVVFDEAHNIDNVCIESLSTDITEDSLRKATRG 233
Query: 315 ---LQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRE 371
L+ ++ Q+ + Q L + LV + R A A++E + + L+E
Sbjct: 234 AQNLENKISQMRDTDQ---QQLQNEYEKLVQGL--RDADEARQEDAFMANPALPEDLLKE 288
Query: 372 LQEANISR--------QCFPILLECATKAIKEATDTE-SELPHLSGMSVITLEGL----- 417
NI R + F L+ K + ++T S L HL + I + L
Sbjct: 289 AVPGNIRRAEHFIAFLKRFIEYLKTRMKVRQVISETPPSFLAHLREHTFIEKKPLRFCAE 348
Query: 418 -FSSLTYFFSRNGSHVSDYQ--------------------LALQKYIKRDSKNPGGNWTH 456
+SL + +++ DYQ L L+ + ++ P
Sbjct: 349 RLTSLVR--TLELTNIEDYQPLQEVATFATLVATYEKGFLLILEPFESDTAEVPNP---- 402
Query: 457 TLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQV 516
L CL+ A+ K V + S+I+TSGT+SP+ + L F T ++ + + + +
Sbjct: 403 VLHFTCLDAAIAIKPVFDRFYSVIITSGTISPLEIYPKML--DFSTVIQESYAMTLARRS 460
Query: 517 LTSVIST-GPDNYPLNASYK---------------------TADG-------YKLMEKLC 547
+I T G D ++ S++ T DG Y ME +
Sbjct: 461 FMPMIVTRGSDQASVSTSFQVRNEPSVVRNYGNLLTEFAKITPDGMVVFFPSYLYMESII 520
Query: 548 NRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGN 607
+ W+ G + K + VE + + L+ Y + G ++ R K
Sbjct: 521 SMWQGMGILDEVWKYKLILVETPDAQETS--LALETYRTACCNGRGAVLLCVARGKVSEG 578
Query: 608 NDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKY-NDTYRSSKNLLS 666
D + ++ G R + +G+PF + + ++ +TYR +
Sbjct: 579 IDFD--------HQYG-------RTVLCIGVPFQYTESRILKARLQFLRETYR-----IK 618
Query: 667 GNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYD-- 724
N++ A R Q +GR +R + DYG ++L D RFQ + R+ + KW+ + +++ D
Sbjct: 619 ENDFLSFDAMRHAAQCLGRVLRGKDDYGIMVLADRRFQ--KKRSQLPKWINQGLQESDVN 676
Query: 725 -SFDASLEGLKSFFRD------------VKGWVGKKMFNGLENSDNDVDHVSSMDQCKEV 771
S D ++ + F R + W K + E D++ + +++ +
Sbjct: 677 LSTDMAVSSARRFLRTMAQPFRAKDQEGISTWGYKDLMEHKEKM--DLERIKELEEEAQR 734
Query: 772 TKQNTQELNKSDHSGQNVQSISKYDPF 798
K Q+ N H + Q + + D F
Sbjct: 735 PKPAAQDNNFEYHDDEFDQDMMEMDGF 761
>gi|156846864|ref|XP_001646318.1| hypothetical protein Kpol_1032p54 [Vanderwaltozyma polyspora DSM
70294]
gi|156116993|gb|EDO18460.1| hypothetical protein Kpol_1032p54 [Vanderwaltozyma polyspora DSM
70294]
Length = 776
Score = 119 bits (297), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 181/806 (22%), Positives = 320/806 (39%), Gaps = 171/806 (21%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+++ + V FPY + Y Q +MC + TLD +++LE P+GTGK++SLL T+
Sbjct: 3 FYIDDLPVLFPYPKIYPEQYHYMCDMKKTLD-----AGGNSILEMPSGTGKTVSLLSLTV 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNK 136
A+Q + ++ S + + E L N + G T++ K
Sbjct: 58 AYQMHYPEHRKIIYCSRTMSEIEKALIELENLMDYRSRELGYAEDFRGLGLTSR-----K 112
Query: 137 NVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE 196
N+ H Q+S+ E K T V+ + TN + K D E
Sbjct: 113 NLC------------LHPQVSK---ERKGT-------VVDEKCRRMTNGQAKRKLESDPE 150
Query: 197 CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMA 256
K+ L C +N++ + L KG V+ E L+ + C Y+ R M
Sbjct: 151 AKVEL------CDYHENLYDLEIEDYLPKG----VYSFERLLKYCEQKTLCPYFIVRRMI 200
Query: 257 DDAQLVFCPYSYIINPVI--RGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLK 314
++ Y Y+++P I R + EV K +I+I DEAHNI+++ ++ S+D+ D+L +
Sbjct: 201 SMCNIIIYSYHYLLDPKIAERVSREVS-KDSIVIFDEAHNIDNVCIESLSLDLTNDMLKR 259
Query: 315 -------LQMELEQVCSVNPMI----YQPLIE--------------------MTQDLV-- 341
L ++E+V V+ Y+ L++ ++QDL+
Sbjct: 260 ATKGANALANKIEEVREVDSQKLQDEYEKLVKGLHTADILEEEEEPLVEVPVLSQDLLTE 319
Query: 342 ---GWIERRK--ATLAKREFQHFFSCWTGDKALRELQEANIS-RQCFPILLECATKAIKE 395
G I R + + KR ++ T K L + E S Q L K ++
Sbjct: 320 AIPGNIRRAEHFVSFLKRLIEYL---KTRMKVLHVISETPKSFLQHLKQLTFIDRKPLRF 376
Query: 396 ATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWT 455
++ S L +S I + F + ++ + L ++ Y ++ P
Sbjct: 377 CSERLSLLVRTLEVSEIEDFNALKDIATFATLVSTYEDGFLLIIEPYEIENAAVPNP--- 433
Query: 456 HTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQ 515
L CL+ ++ K V E S+I+TSGT+SP++ + L F T LE + + + +
Sbjct: 434 -ILRFTCLDASIAIKPVFEKFSSVIITSGTISPLDMYPRMLN--FNTVLEKSYAMTLTKK 490
Query: 516 -VLTSVISTGPDNYPLNASYK---------------------TADG-------YKLMEKL 546
L +++ G D +++ ++ T DG Y ME +
Sbjct: 491 SFLPMIVTKGSDQVAISSRFEIRNDPSIVRNYGSMLVEFAKITPDGMVVFFPSYLYMESI 550
Query: 547 CNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREG 606
+ W+ G + K + VE + + L+ Y + S G
Sbjct: 551 ISMWQTMGILDEVWKHKLILVETPDAQETS--LALETYRKACSNG--------------- 593
Query: 607 NNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPN---INDIQVSLKKKYNDTYRSSKN 663
+GA L+V RGK+ GI F + + + + +Y ++
Sbjct: 594 ---------------RGAILLSVARGKVSEGIDFDHHYGRTVLMIGIPFQYTESRILKAR 638
Query: 664 L--------LSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKW 715
L + N++ A R Q +GR +R + DYG ++L D RF RN+ + KW
Sbjct: 639 LEFLRENYQIRENDFLSFDAMRHAAQCLGRVLRGKDDYGVMVLADRRFSRRRNQ--LPKW 696
Query: 716 LRKSIKQYD---SFDASLEGLKSFFR 738
+ + + D S D ++ K F R
Sbjct: 697 IAQGLSDADLNLSTDMAIANTKQFLR 722
>gi|145517083|ref|XP_001444430.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124411841|emb|CAK77033.1| unnamed protein product [Paramecium tetraurelia]
Length = 905
Score = 119 bits (297), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 148/323 (45%), Gaps = 64/323 (19%)
Query: 1 MVSEANPNPNYRKPLNAYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLE 60
MV E + N K + + V FP+QPY Q +M VI L++ Q +ALLE
Sbjct: 33 MVKEIEIDGNMCKKQASLVLDNTPVYFPHQPYDVQKSYMESVIRALNKKQ-----NALLE 87
Query: 61 SPTGTGKSLSLLCSTLAWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTI 120
SPTGTGK+LSLLC++LAW + KN+ ++ +P
Sbjct: 88 SPTGTGKTLSLLCASLAWLK----KNRKDQLNSDQP------------------------ 119
Query: 121 PPSTNGQTAQVAMNNKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKH 180
KN+K I Y+SRTH+Q+ QV E KKT Y+ +++L SR
Sbjct: 120 ---------------KNIK------IIYSSRTHAQLKQVAMELKKTVYKPNVSMLGSRDQ 158
Query: 181 YCTNKYVRDKEN--IDEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLV 238
YC + +++ C+ + C +K H + + + + +++
Sbjct: 159 YCIRGDFSAIKGTLLNQSCRKSVKSNQ--CQFYKKEHLIL----MAQNYSTLISSLDEAK 212
Query: 239 NVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDI 298
G + C YY R D A L+ PY+Y++ + V+I+ +ILI DEAHN++
Sbjct: 213 QFGFKNKLCPYYFERQRLDFADLILLPYNYLLEKDFQDV--VEIENSILIFDEAHNVQST 270
Query: 299 ARDAGSVDIDEDVLLKLQMELEQ 321
A + S I + +++ + +LE+
Sbjct: 271 AEEGSSFLITHNNIIEAEKDLEK 293
Score = 115 bits (287), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 108/409 (26%), Positives = 176/409 (43%), Gaps = 79/409 (19%)
Query: 457 TLSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVD-- 513
++++WCL P++ F + S+ SI+LTSGTLSPM S++ EL + F L H+ID++
Sbjct: 474 SINMWCLEPSLAFSRLFSKSIYSILLTSGTLSPMPSWACELRIPFEVQLVNEHIIDLNKN 533
Query: 514 ---LQVLTSVISTGPDNYP----------LNASYKTADG-------YKLMEKLCNRWRET 553
Q T S N L+ S +G Y LM K ++W
Sbjct: 534 LRVFQHKTFDFSFNQRNNEEQVSKFGVTLLSLSQIIPNGILVIFSSYSLMNKFRSKWTYN 593
Query: 554 GQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTI 613
RL K EP+ + + + V Y +G+ V + +V
Sbjct: 594 KLLPRLCEIKACLWEPQQSA--EMQNVFDLYKQKSKKGAIMFAVHRGKVA---------- 641
Query: 614 ESQENANKKGASFL-AVCRGKIVVGIPFPNINDIQV-----SLKKKYNDTYRSSKNLLSG 667
+G F +CR +VG+P+P D + L K +ND +++ +
Sbjct: 642 --------EGIDFSDELCRAIFLVGVPYPPKQDNHLLEKMGYLDKIFNDPEFTNQQRIKS 693
Query: 668 NEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFD 727
+EWY QA RA NQA+GR IRH DYG + L D+RF+ + +SKW + +I+ + + D
Sbjct: 694 SEWYTQQAIRATNQAMGRVIRHINDYGIVYLCDKRFEYRDIKQGLSKWAQPAIQPWVNDD 753
Query: 728 ASLEGLKSFFRD--------VKGWVGKK------------MFNGLENSDNDVDHVSSMDQ 767
++ K F+ +K + +K F GL+N ++ ++
Sbjct: 754 EVIKQTKEFYNRTISIKEQCIKEQIEQKPIQEQDCKKRKLQFFGLQNKND-------FEK 806
Query: 768 CKEVTKQNTQELNKSDHSGQ--NVQSIS-KYDPFSHQKSQGNFEVQTSL 813
K+ T++ + LN+ + N+QS Y P Q N Q L
Sbjct: 807 LKDETQERVKNLNEQQQQNEYINLQSYQMNYKPQEQQNKNSNKNSQKQL 855
>gi|193608349|ref|XP_001949260.1| PREDICTED: probable ATP-dependent RNA helicase DDX11-like
[Acyrthosiphon pisum]
Length = 890
Score = 118 bits (296), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 151/333 (45%), Gaps = 84/333 (25%)
Query: 457 TLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSEL---------GVQFGTCLEAP 507
L LNPAV FK++ + + S+I++ GT+ P++ F +L + +C
Sbjct: 582 VLKFLLLNPAVHFKEIVDKARSVIVSGGTMEPISEFKDQLFNFNGDNSDRIMHFSC---G 638
Query: 508 HVIDVDLQVLTSVISTGPDNYPLNASYKTADGYK-------LMEKLCN------------ 548
HV+ D +L ++ +GP + SY+ K L+E +C
Sbjct: 639 HVVPPD-HILPLIVCSGPTGKQFDFSYQERTSIKMLNEIGSLLENICRTVPAGIVCFFPS 697
Query: 549 --------RWRETGQ-WSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRK 599
++ E + +RL+ +K LF EPK +Q D VLK+Y +I
Sbjct: 698 YDYEQFVYQYLEKNKVINRLSERKKLFREPKSTNQVD--EVLKNYSQAI----------- 744
Query: 600 KRVKREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNIN 644
T S N+ GA +V GK IV+G+P+PNI
Sbjct: 745 ------------TTTSVLNSKVTGALLFSVIGGKLSEGLNFSDDLGRCVIVIGLPYPNIK 792
Query: 645 DIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQ 704
+++ K Y +++ L +G + Y N +A+NQ+IGR +RH+ DY A++LLD R+Q
Sbjct: 793 SLELQQKMNYLNSHMG---LGTGQQHYENLCMKAVNQSIGRSVRHQQDYAAVLLLDHRYQ 849
Query: 705 EERNRAHISKWLRKSIKQYDSFDASLEGLKSFF 737
+ R + KWL+ S++++ F ++ L FF
Sbjct: 850 RDSVRNALPKWLQPSLQEHSKFGSAFAQLNKFF 882
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 93/179 (51%), Gaps = 32/179 (17%)
Query: 146 IFYASRTHSQISQVISEYKKTAYRVPMAV-LASRKHYCTNKYVRDKENIDEECKLLLGDR 204
I++ SRTHSQ+SQ ++E KK+ Y + LASR++YC N+ V+ +NI L+ +R
Sbjct: 208 IYFCSRTHSQLSQFVAELKKSPYSTSRIIPLASRQNYCINRTVKKLKNIT-----LMNER 262
Query: 205 --NLGCPQFKN-----------VHKVRGHP-------------SLQKGGCHEVHDIEDLV 238
+G P+ V K + P SL + E+ D+E+LV
Sbjct: 263 CLEMGKPKPTQKPTKVSSVGSVVKKKKTEPICKCPYNDKDKIQSLAEEVTIELRDMEELV 322
Query: 239 NVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIED 297
N G + C YYA+R AQ+V PY+ +++ R A + ++G I I+DEAHN+ D
Sbjct: 323 NRGDQISACPYYASRESVKYAQIVTLPYNTLLHKSTREASGIRLEGNIFIIDEAHNLLD 381
Score = 52.4 bits (124), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 5/52 (9%)
Query: 27 FPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
FP+ PYG Q FM + S ++ G + ESPTGTGK+LS++C + W
Sbjct: 24 FPFTPYGIQHDFMTEIYSAIE-----GRKLGIFESPTGTGKTLSIICGAVRW 70
>gi|388854508|emb|CCF51895.1| related to CHL1-protein of the DEAH box family [Ustilago hordei]
Length = 931
Score = 118 bits (296), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 150/324 (46%), Gaps = 62/324 (19%)
Query: 463 LNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQF-----GTCLEAPHVIDVDLQVL 517
LNP+ VFK + + + S+IL GT+ P++ F +L + F HVI ++
Sbjct: 620 LNPSHVFKSLVDEARSVILAGGTMEPISDFRQQL-LPFLPSDRLVTFSCGHVIPPS-NLM 677
Query: 518 TSVISTGPDNYPLNASYKTAD----------------------------GYKLMEKLCNR 549
SV+S+ P P + D Y ++KL R
Sbjct: 678 VSVLSSSPKGLPFEFKLDSRDNTDMLDQLGKTLVNLCNIIPAGLVVFVPSYAFLDKLMAR 737
Query: 550 WRE--TGQ-WSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREG 606
W++ +GQ RL+AKK +F+EPK Q D VL Y A +R ++ + G
Sbjct: 738 WKDAASGQVLQRLSAKKKIFIEPKTTMQVD--KVLAEY---------TAAIRAEQGRGGG 786
Query: 607 NNDLNTIESQENANKKGASFL-AVCRGKIVVGIPFPNINDIQVSLKKKY----NDTYRSS 661
+ + + + +G +F + RG ++VG+PF NIN +++ + KY R++
Sbjct: 787 GAIMLAVVGAKLS--EGINFSDDLARGVVMVGMPFANINSPELAERIKYVRDLAKQARTT 844
Query: 662 KNLL------SGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKW 715
NL G+E Y N +A+NQ+IGR +RH+ DY A+ILLD R+ R + W
Sbjct: 845 SNLSMPKVADPGDELYTNLCMKAVNQSIGRAVRHQKDYAALILLDRRYGRPEIRQRLPAW 904
Query: 716 LRKSIKQYDSFDASLEGLKSFFRD 739
+R + + F ++ +FF++
Sbjct: 905 IRNQVTVAERFGGMIQQTAAFFKN 928
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/199 (34%), Positives = 106/199 (53%), Gaps = 23/199 (11%)
Query: 144 PTIFYASRTHSQISQVISEYKKTAY---------RVPM--AVLASRKHYCTNKYV----- 187
P I YASRTHSQ+SQ ++E KKT++ ++P+ LASRK C N+ V
Sbjct: 239 PRIIYASRTHSQLSQFVAELKKTSFGQVDVLDAEKMPVRTIALASRKQMCINQDVQRIAS 298
Query: 188 -RDKENIDEEC-KLLLGDRNLG----CPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVG 241
+ E ++E C +L+ + G P F V + + EV DIEDLV +G
Sbjct: 299 IKGSEAMNERCLELIKAKKGKGRCALLPTFDQVGRAE-ILEFRDAAMAEVGDIEDLVQLG 357
Query: 242 QVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARD 301
+ C Y+AARS A A+LV PY+ ++ R ++ + +KG I+++DEAHN+ D
Sbjct: 358 ISTKTCPYFAARSSAKQAELVTLPYNLLLQKDARQSLGISLKGCIVLIDEAHNLIDTILS 417
Query: 302 AGSVDIDEDVLLKLQMELE 320
SV ID +++ ++E
Sbjct: 418 THSVTIDSRQIIQASKQIE 436
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 6/56 (10%)
Query: 24 QVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
Q +FP+ + Y QL M +V ST++ DG + ESPTGTGKSLSL+C+ W
Sbjct: 25 QFQFPFPEAYSIQLDLMRQVFSTIE----DGKV-GIFESPTGTGKSLSLICAAFTW 75
>gi|299471116|emb|CBN78974.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 415
Score = 118 bits (296), Expect = 2e-23, Method: Composition-based stats.
Identities = 78/233 (33%), Positives = 106/233 (45%), Gaps = 62/233 (26%)
Query: 531 NASYKTADGYKLMEKLCNRWRETGQ---WSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNS 587
N+S + Y+ M RW+ W+R++A K +EP+ + D + V++ Y
Sbjct: 18 NSSAPPPERYRTMNDCVQRWKHFSNGKAWARISAHKEPMIEPR--TAADLKAVMEEYDAK 75
Query: 588 ISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKI------------- 634
I N GA FLAVCRGK+
Sbjct: 76 IE------------------------------NTGGAVFLAVCRGKVSEGMDFSDGRARC 105
Query: 635 --VVGIPFPNINDIQVSLKKKYNDTYRSSKNLL-------SGNEWYCNQAFRALNQAIGR 685
V GIP+ D +V LKKKY S++LL +GNEWY QA RA+NQAIGR
Sbjct: 106 VVVTGIPYAPAMDPKVVLKKKY-----MSESLLPPGVARVTGNEWYQQQASRAVNQAIGR 160
Query: 686 CIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
IRHR DYG ++L D RF E+RNR +S W R +++ F L FF+
Sbjct: 161 VIRHRLDYGCVVLCDSRFAEDRNRKSLSLWARPFVRECSGFGKVAADLTKFFK 213
>gi|389748846|gb|EIM90023.1| DNA repair helicase [Stereum hirsutum FP-91666 SS1]
Length = 802
Score = 118 bits (296), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 173/821 (21%), Positives = 318/821 (38%), Gaps = 177/821 (21%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+ + + + FPY + Y Q +MC + TLD GHC +LE P+GTGK++SLL +
Sbjct: 3 FFIDDLPIIFPYDRIYPEQYAYMCDLKRTLDAT---GHC--VLEMPSGTGKTVSLLSLIV 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNK 136
++QQ K +L S + +PE + +
Sbjct: 58 SYQQFFPTKRKLIYCSRT-----------------VPEIEKAL----------------A 84
Query: 137 NVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAV-LASRKHYCTNKYVRDKEN--- 192
+++ M +ISQ +E ++ + M + L SRK+ C + V ++
Sbjct: 85 ELRRLM----------EYRISQAETEEQRVKEQGFMGIGLTSRKNLCIHPEVSKEKKGKV 134
Query: 193 IDEECKLLL-------GDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVR 245
+D C+ + G N G + H+ G + + D+++ G+
Sbjct: 135 VDARCRDMTNSAACQKGRANPGSVDLCDFHEKLGEREPGNLIPPGIWTLADVMDYGRQQG 194
Query: 246 GCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGS 304
C Y+ R M +V + Y+++P + + ++ K +I++ DEAHNI+++ ++ S
Sbjct: 195 TCPYFTVRRMLPFVDIVIYSFHYLLDPKVAEQVSKEMSKDSIVVFDEAHNIDNVCIESLS 254
Query: 305 VD-------------------IDE----------DVLLKLQMELEQVCS------VNPMI 329
+D IDE D KL L+ S NP++
Sbjct: 255 IDLTRPMLDSAARSVNKLGDKIDEIKKTDASKLQDEYAKLVEGLQDAASDEDAFMSNPVL 314
Query: 330 YQPL--------IEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRELQEAN-ISRQ 380
+ L I + V +++R L R T L+ L++ I R+
Sbjct: 315 PEDLLNEAIPGNIRKAEHFVAFLKRFVEYLKTRMRVLHVVAETPLSFLQHLKDITYIERR 374
Query: 381 CFPILLECATKAIKEATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQ 440
E +K E+ L S + F++L + + + L L+
Sbjct: 375 PLRFCAERLQSLVKTL-----EINRLDEFSALQKVASFATLVSTYEKG------FLLILE 423
Query: 441 KYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQF 500
+ ++ P + T CL+PA+ K V E S+++TSGT+SP++ + L QF
Sbjct: 424 PFETDNATVPNPIFHFT----CLDPAIAIKPVFERFSSVVITSGTISPLDMYPKML--QF 477
Query: 501 GTCLEAPHVIDVDLQV-LTSVISTGPDNYPLNASYKT---------------------AD 538
++ + + + L VI+ G D +++ ++ D
Sbjct: 478 TPVVQETYAMTLTRNAFLPLVITRGSDQVAISSRFEVRNDPAVVRNFGSILVEYSKIVPD 537
Query: 539 G-------YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQG 591
G Y ME + W + G + + K +FVE ++ I L++Y + G
Sbjct: 538 GIVAFFPSYLYMESIVAAWNDMGILNEVWKHKLIFVETPDANET--SIALENYRRACDNG 595
Query: 592 SKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLK 651
++ R K D + + G R I+ G+P+ + +
Sbjct: 596 RGAVLLSVARGKVSEGIDFD--------HNYG-------RAVIMFGVPYQYTESRILKAR 640
Query: 652 KKY-NDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRA 710
+Y D YR + +E+ A R Q +GR +R + D+G ++ D+RF RA
Sbjct: 641 LEYLRDAYR-----IRESEFLGFDAMRNAAQCVGRVLRGKTDWGLMVFADKRFARADKRA 695
Query: 711 HISKWLRKSIKQYD---SFDASLEGLKSFFRDVKGWVGKKM 748
+ +W+ + I + S D +L K F R + VG +
Sbjct: 696 KLPRWINQYITETAANLSTDMALTLSKLFMRTISQSVGDNL 736
>gi|430813060|emb|CCJ29560.1| unnamed protein product [Pneumocystis jirovecii]
Length = 774
Score = 118 bits (296), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 167/761 (21%), Positives = 306/761 (40%), Gaps = 131/761 (17%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+ + + V FPY + Y Q +MC + TLD GHC +LE P+GTGK++SLL +
Sbjct: 3 FFIDDLPVLFPYPRIYPEQYAYMCHLKKTLDAG---GHC--VLEMPSGTGKTVSLLSLII 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNK 136
++Q+ + +L S + + E + L N F + G T++ K
Sbjct: 58 SYQKVFEQHRKLVYCSRTMSEIEKILVELKNLIEFRKKISEENSKFRALGLTSR-----K 112
Query: 137 NVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE 196
N+ + S H + ++ +R T +VR+K+ E+
Sbjct: 113 NL-------CLHPSIKHEKKGNIVD---------------ARCRGLTASFVREKKKAGEK 150
Query: 197 CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMA 256
L L NL F ++ + V DL+ G+ + C Y+ AR M
Sbjct: 151 VNLCLYYENLNFLDFCDLIP------------YGVFTFTDLIEYGEKNQQCPYFIARRMI 198
Query: 257 DDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLK- 314
+V Y Y+++P I + ++ K I++ DEAHNI+++ ++ SVDI ED L +
Sbjct: 199 PFCNVVVYSYHYLLDPKISEFISRELSKDCIVVFDEAHNIDNVCIESLSVDITEDSLKRA 258
Query: 315 ------LQMELEQVCSVNP----MIYQPLIEMTQDLVGWIERRKAT------------LA 352
L+ ++ + N M Y+ L+E ++ IE+ K L
Sbjct: 259 SHSINSLETKIANMKKNNAEKLQMEYRKLVEGLRE----IEKIKENDIFITNSILSDDLL 314
Query: 353 K-------REFQHFFSCW--------TGDKALRELQEANIS-RQCFPILLECATKAIKEA 396
K R+ +HF + T K L + E +S Q L +K ++
Sbjct: 315 KEAIPGNIRKAEHFVAFLKRFVEYMKTRMKVLHVIAETPLSFLQHLKELTYIESKPLRFC 374
Query: 397 TDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTH 456
+ + L +S I +T F + ++ + + L+ + + P +
Sbjct: 375 AERLNSLIRTLELSDIEDYQYLQEITDFATLVSTYEKGFIIILEPFETDTATVPNPVFHF 434
Query: 457 TLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQ- 515
T CL+ ++ K + S+I+TSGT+SP++ + L QF ++ + I +
Sbjct: 435 T----CLDASIAIKPIFAKFKSVIITSGTISPLDMYPKIL--QFNAVIQESYNISLARNS 488
Query: 516 VLTSVISTGPDNYPLNASYKTADGYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQE 575
L +I+ G + +++ ++ D ++ + E + + P G
Sbjct: 489 FLPMIITRGSNQVAISSKFEVRDDPSVVRNYGDILLEFSK-----------ITPDG---- 533
Query: 576 DFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENA-----NKKGASFLAVC 630
++ + + I S + + K + E + T+ + + N +GA L V
Sbjct: 534 ----LVAFFPSYIYMESINEIWKYKLILVETPDSQETVLALKTYRTACDNGRGAILLCVA 589
Query: 631 RGKIVVGIPFPN---INDIQVSLKKKYNDTYRSSKNL--------LSGNEWYCNQAFRAL 679
RGKI GI F + I + +Y + L + N++ A R
Sbjct: 590 RGKISEGIDFDHHYGRTVIMFGIPYQYTKSRILKARLEFLRDMYHIKENDFLTFDAMRHA 649
Query: 680 NQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSI 720
Q +GR +R + DYG ++L D RF R + KW+++ I
Sbjct: 650 AQCLGRVLRGKDDYGIMVLADRRFSRTDKRNKLPKWIQQYI 690
>gi|342186023|emb|CCC95508.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 973
Score = 118 bits (296), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 147/303 (48%), Gaps = 18/303 (5%)
Query: 457 TLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCL--EAPHVIDVDL 514
++ + CL+ ++ F + ++ ++L SGTL+P +LG+ G+ + E HV+ +
Sbjct: 574 SIGIRCLDGSLTFHHLLGVAHRVVLASGTLAPFQQLGQDLGIPLGSMVTYEGLHVVR-EF 632
Query: 515 QVLTSVISTGPDNYPLNASYKTADGYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQ 574
Q V++ + PLN +Y + ++ L + + +F+ +
Sbjct: 633 QYRLRVLTHTSNATPLNCNYNSFRDPSFIDGLSENITALIEGVEIGGVL-VFLPNYSVMK 691
Query: 575 EDFEIVLKHYYNSISQGS----KCAVVRKKRVKREGNNDLNTIESQENANKKGASFLA-V 629
+ H+++ + QG +C V R + ++ + + +A +G + LA V
Sbjct: 692 AVGSRLFAHFHDKLRQGGARGERCNVPRVFLESQSADDFPAVLAAFRSATSRGCAVLASV 751
Query: 630 CRGKIVVGIPFPN-----INDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIG 684
R K+ GI F + + + V L+ + T ++ + SG EWY A RA+NQA+G
Sbjct: 752 FRAKVSEGIDFADHMARLVICVGVPLQPLLSWTVQAQRRY-SGEEWYVGDAMRAINQALG 810
Query: 685 RCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSF---FRDVK 741
RCIRH DYGA++LLD RF++ + +S+W R +K + S L+ L+ F FRD
Sbjct: 811 RCIRHYHDYGAMVLLDARFEQSSFKRQLSRWCRGELKVHSSLPPLLDDLQVFFCRFRDHD 870
Query: 742 GWV 744
G V
Sbjct: 871 GRV 873
Score = 108 bits (270), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 105/366 (28%), Positives = 169/366 (46%), Gaps = 74/366 (20%)
Query: 27 FPYQPYGSQLVFMCRVISTLDRAQRDGHCH-ALLESPTGTGKSLSLLCSTLAWQ------ 79
P++PY Q M + ++L H A +E PTG GK+L+LL S L +Q
Sbjct: 10 MPFEPYAVQKDMMQTITTSL--LSSSPHLPIAAVEIPTGCGKTLALLSSVLRYQAELEKL 67
Query: 80 ------QNCKLKNQLANISHSKPDTEAV------------TDPLANGG------GFIPES 115
Q+ + + A I+ + V T P A G G + +
Sbjct: 68 TPHELEQHFRKRRCGARIAEIAASADTVVQQTSWCQCDGRTPPTAELGLLRTDEGAVDDD 127
Query: 116 QPSTI---------PPSTNGQTAQVAMNNKN---VKKKMTP---TIFYASRTHSQISQVI 160
+ PPS G+ +V + K + ++ P TIFY +RTHSQ+ Q +
Sbjct: 128 SLWRVSSLFFKQFRPPS--GKRLRVESDGKGASELSRQHRPPPCTIFYVTRTHSQLRQSV 185
Query: 161 SEYKKT--AYRVPMAVLASRKHYCTNKYVR----------DKENIDEECKLLLGDRNLGC 208
E +K R+ M +L SRK YC N++ + N+ E C L+ +LG
Sbjct: 186 GELRKLRGLERLKMNILGSRKQYCINQHAMRAYASKALPAEGNNLGEVCDKLV---SLGQ 242
Query: 209 PQFKNVHKVRGHPSLQK----GGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFC 264
+ + + V G +L + G +V DIEDLV G ++ C YYAAR + A + F
Sbjct: 243 CEAVHGYGVLGSRALTRPLNQGRSDKVWDIEDLVTEGVGMKCCPYYAARDLVFFAHINFA 302
Query: 265 PYSYIINPVIRG--AMEVDIKG-AILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQ 321
Y Y+++P+IR ME +K +I+I DEAHN+ + ++A S+++ D L + E++
Sbjct: 303 TYQYLLDPLIRHECKMEPALKNHSIIIFDEAHNVSSVCQEALSMEMPLDALQLILSEIQP 362
Query: 322 VCSVNP 327
+ +NP
Sbjct: 363 L--INP 366
>gi|363751190|ref|XP_003645812.1| hypothetical protein Ecym_3517 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889446|gb|AET38995.1| Hypothetical protein Ecym_3517 [Eremothecium cymbalariae
DBVPG#7215]
Length = 756
Score = 118 bits (296), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 173/806 (21%), Positives = 320/806 (39%), Gaps = 171/806 (21%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+++ + V FPY + Y Q +MC + TLD +++LE P+GTGK++SLL T+
Sbjct: 3 FYIDDLPVIFPYPKIYPEQYQYMCDLKKTLDIGG-----NSILEMPSGTGKTVSLLSLTV 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNK 136
A+Q + ++ S + + E L + + + ++ +
Sbjct: 58 AYQMHYPEHRKIVYCSRTMSEIEKALVELESLMDY---------------RAKELEYQEE 102
Query: 137 NVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE 196
+T SR + + +S+ +K +V+ + TN + K+ D E
Sbjct: 103 FRGLGLT------SRKNLCLHPRVSKERKG------SVVDEKCRRMTNGQAKTKKEQDIE 150
Query: 197 CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMA 256
+ L C +N++ + L G V+ E L+ + C Y+ R M
Sbjct: 151 ANVEL------CEYHENMYNYQPEEYLPLG----VYSFEKLIKYCEDKTICPYFTVRRMI 200
Query: 257 DDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLK- 314
++ Y Y+++P I + +I + AI+I DEAHNI+++ ++ S+D+ +D+L +
Sbjct: 201 SMCNIIIYSYHYLLDPRIEERVSREISQNAIVIFDEAHNIDNVCIESLSLDLTKDLLKRA 260
Query: 315 ------LQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKA 368
L ++++V V+ M Q + QDLV + R L E +
Sbjct: 261 SRGANALGKKVDEVRKVDTMKLQ---QEYQDLVKGL-RANDILDPDEEPLIPTPVLSRDV 316
Query: 369 LRELQEANISR--------QCFPILLECATKAIKEATDT-ESELPHLSGMSVI------- 412
L+E NI R + F L+ K + ++T S L HL ++ I
Sbjct: 317 LKEAVPGNIRRAEHFVSFLKRFIEYLKTRMKVLHVISETPNSFLHHLKQLTFIERKPLRF 376
Query: 413 ----------TLE-------GLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWT 455
TLE + F + ++ S + L ++ Y ++ P
Sbjct: 377 CSERLSLLVRTLEVDEIEDFNALKDIATFATLISTYESGFLLIIEPYEIENAAVPNPIMR 436
Query: 456 HTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDV-DL 514
T CL+ ++ K V E S+I+TSGT+SP++ + L FGT ++ + + + +
Sbjct: 437 FT----CLDASIAIKPVFERFSSVIITSGTISPLDMYPKMLN--FGTVVQKSYSMTLAEK 490
Query: 515 QVLTSVISTGPDNYPLNASYK---------------------TADG-------YKLMEKL 546
L +++ G D +++ ++ T DG Y ME +
Sbjct: 491 SFLPMIVTKGSDQVAISSRFEIRNDPSIVRNYGSMLVEFAKITPDGMVVFFPSYLYMESI 550
Query: 547 CNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREG 606
+ W+ G + K + VE + + L+ Y + S G
Sbjct: 551 ISTWQTMGILDEVWKYKLILVETPDAQETS--LALETYRKACSNG--------------- 593
Query: 607 NNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPN---INDIQVSLKKKYNDTYRSSKN 663
+GA ++V RGKI GI F + + + +Y ++
Sbjct: 594 ---------------RGAILMSVARGKISEGIDFDQHYGRTVLMIGIPFQYTESRILKAR 638
Query: 664 L--------LSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKW 715
L + N++ A R Q +GR +R + DYG ++L D RF R ++ + KW
Sbjct: 639 LEFLRENYQIRENDFLSFDAMRHAAQCLGRVLRGKDDYGVMVLADRRFS--RKKSQLPKW 696
Query: 716 LRKSIKQYD---SFDASLEGLKSFFR 738
+ + + D S D ++ K F R
Sbjct: 697 ILQGLSDADLNLSTDMAIANTKQFLR 722
>gi|260830571|ref|XP_002610234.1| hypothetical protein BRAFLDRAFT_286830 [Branchiostoma floridae]
gi|229295598|gb|EEN66244.1| hypothetical protein BRAFLDRAFT_286830 [Branchiostoma floridae]
Length = 763
Score = 118 bits (295), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 170/792 (21%), Positives = 312/792 (39%), Gaps = 184/792 (23%)
Query: 19 HVGGIQVEFPYQ-PYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLA 77
++ G+ V FPY Y Q +M + +LD GHC +LE P+GTGK++SLL +A
Sbjct: 4 NIDGLLVLFPYDYIYPEQYSYMVELKRSLDAK---GHC--VLEMPSGTGKTVSLLSLIVA 58
Query: 78 WQQNC-KLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNK 136
+ + K +L S + P+ E V + L + + PP+ G +A++++
Sbjct: 59 YLKTSPKDVCKLIYCSRTVPEIEKVLEELRKLMEYYEKETGE--PPNLIG----LALSSR 112
Query: 137 NVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE 196
K + H ++S + ++ K + R H T +VR + D +
Sbjct: 113 ---KNLC--------IHPEVSTL--QFGKE--------VDGRCHQMTASFVRSRHERDPD 151
Query: 197 CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMA 256
+ C ++ + G +L G +++++D+ +VG+ C Y+ AR
Sbjct: 152 VPV--------CDFYERFDAL-GRETLLPPG---IYNLDDMKDVGREKGYCPYFMARYAI 199
Query: 257 DDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLKL 315
A +V Y Y+++P I + ++ K ++++ DEAHNI+++ D+ SV I+ +L +
Sbjct: 200 TYANIVVYSYHYLLDPKIADLVSKELAKNSVVVFDEAHNIDNVCIDSMSVTINRRMLDRC 259
Query: 316 QMELE-------------------------------------QVCSVNPMIYQPL----- 333
Q +E V NP++ +
Sbjct: 260 QTNVEALTRTVQRLKDTDQQRLRQEYSRLVEGLREANVARETDVVLSNPVLPDEVLQEAV 319
Query: 334 ---IEMTQDLVGWIERRKATLAKR-EFQHFFSCWTGDKALRELQE-ANISRQCFPILLEC 388
I + VG+++R L R QH T L++L+E + R+ E
Sbjct: 320 PGNIRTAEHFVGFMKRFLEYLKSRLRIQHVVQ-ETPASFLKDLKEKVCLDRKPLRFCSER 378
Query: 389 ATKAIKEATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSK 448
I+ E+ L+ S + L F++L +++ + L ++ + D +
Sbjct: 379 LNSLIRTL-----EIADLTDFSPLILLANFATLV------STYMKGFTLIMEPF---DDR 424
Query: 449 NPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQ------FGT 502
P + L+ C++ ++ K V + S+++TSGTLSP++ + L + F
Sbjct: 425 TPTIS-NPILNFSCMDASIAIKPVFDRFQSVVITSGTLSPLDMYPKILDFRPVNMASFTM 483
Query: 503 CLEAPHVIDV------DLQVLTSVISTGPD--------NYPLNASYKTADG-------YK 541
L P + + D +TS + D N ++ S DG Y
Sbjct: 484 TLARPCICPMIVGRGNDQVTMTSKFESREDVAIIRNYGNLLVDMSAVVPDGIVAFFTSYS 543
Query: 542 LMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKR 601
ME W E G + K LF+E + ++ + L+ Y + G
Sbjct: 544 YMESTVAAWYEQGIIENVQRNKLLFIETQSAAETS--VALQKYQEACENG---------- 591
Query: 602 VKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPF-------------PNINDIQV 648
+GA L+V RGK+ GI F P +
Sbjct: 592 --------------------RGAILLSVARGKVSEGIDFEHHLGRAVVMFGIPYVYTQSR 631
Query: 649 SLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERN 708
LK + Y + + N++ A R Q +GR +R + DYG ++ D+RF
Sbjct: 632 ILKARLE--YLRDQFQIRENDFLTFDAMRHAAQCVGRVLRGKTDYGVMVFADKRFARSDK 689
Query: 709 RAHISKWLRKSI 720
R + KW+++ +
Sbjct: 690 RGKLPKWIQEYL 701
>gi|396473579|ref|XP_003839371.1| similar to TFIIH basal transcription factor complex helicase
subunit [Leptosphaeria maculans JN3]
gi|312215940|emb|CBX95892.1| similar to TFIIH basal transcription factor complex helicase
subunit [Leptosphaeria maculans JN3]
Length = 792
Score = 117 bits (294), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 168/789 (21%), Positives = 322/789 (40%), Gaps = 136/789 (17%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+ + + V FPY + Y Q +MC + TLD+ GHC +LE P+GTGK++SLL +
Sbjct: 3 FFIDTLPVLFPYPRVYPEQYAYMCDLKRTLDQG---GHC--VLEMPSGTGKTVSLLSLIV 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNK 136
A+QQ+ K +L S + + E L + +T ++ +
Sbjct: 58 AYQQHYPEKRKLIYCSRTMSEIEKALAELKALMKY---------------RTQELGYEEE 102
Query: 137 NVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE 196
+T SR + + + K +++ +R T +V++K+ E+
Sbjct: 103 FRGLGLT------SRKNLCLHPSVKREKSG------SIVDARCRSLTAGFVKEKKERGED 150
Query: 197 CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMA 256
+L C N+ + H + G V + ++ G+ + C Y+ AR M
Sbjct: 151 VEL--------CVYHDNLDLLEPHNLIPPG----VWTFDGMLKYGEQQKQCPYFTARRMM 198
Query: 257 DDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLK- 314
++ Y Y+++P I + ++ K I++ DEAHNI+++ ++ S+D+ EDVL K
Sbjct: 199 PYCNVIIYSYHYLLDPKIADRVSKELSKDCIVVFDEAHNIDNVCIESLSIDLTEDVLRKA 258
Query: 315 ------LQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKA 368
L ++ ++ S + + L LV + R A A+ E + D
Sbjct: 259 TKGVNNLDRKITEMKSTDA---EKLQNEYAKLVDGL--RSADEARSEEAFMANPVLPDDL 313
Query: 369 LRELQEANISR--------QCFPILLECATKAIKEATDT-ESELPHLSGMSVITLEGL-- 417
L E NI R + F L+ K + +DT + L HL ++ I + L
Sbjct: 314 LTEAVPGNIRRAEHFVAFLKRFIEYLKTRMKVLNVVSDTPPAFLSHLRDLTYIERKPLRF 373
Query: 418 ----------------------FSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWT 455
+ F + ++ + + + ++ + + P
Sbjct: 374 CAERLTSLVRTLELTSIEDYQPLQEVATFATLVATYETGFLIIIEPFESATATVPNP--- 430
Query: 456 HTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQ 515
L L CL+ A+ K V E S+I+TSGT+SP++ + L F T ++ + + +
Sbjct: 431 -ILHLTCLDAAIAIKPVFERFYSVIVTSGTMSPLDMYPRMLN--FNTVVQESFTMTLTRK 487
Query: 516 -VLTSVISTGPDNYPLNASYKTADGYKLMEKLCNRWRE----TGQWSRLNAKKPLFVEPK 570
L ++ G D + + ++ + ++ N E T + L++E
Sbjct: 488 SFLPMIVDRGNDQNQITSQFEHRNDLQVQRNFGNLLIEFCKLTPDGVVVFFPSYLYMESI 547
Query: 571 GGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVC 630
+ + EI+ + + ++ + +E L T + N N +GA L V
Sbjct: 548 ISAWQGMEILDTVWKYKL-------ILVETPDAQETALALETFRTACN-NGRGAVLLCVA 599
Query: 631 RGKI---------------VVGIPFPNINDIQVSLKKKY-NDTYRSSKNLLSGNEWYCNQ 674
RGK+ +G+P+ + + ++ +TYR + ++
Sbjct: 600 RGKVSEGIDFDHHYGRTVLCMGVPYQYTESRILKARLEFLRETYR-----IKEADFLSFD 654
Query: 675 AFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYD---SFDASLE 731
A R Q +GR IR + DYG ++L D+RF + ++ + KW++ + S D ++
Sbjct: 655 AMRHAAQCLGRVIRGKDDYGIMVLADKRFN--KKQSQLPKWIQHGLDAKSTKLSIDQAVS 712
Query: 732 GLKSFFRDV 740
K+F RD+
Sbjct: 713 TAKAFLRDM 721
>gi|343425212|emb|CBQ68748.1| probable RAD3-DNA helicase/ATPase [Sporisorium reilianum SRZ2]
Length = 847
Score = 117 bits (293), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 167/800 (20%), Positives = 316/800 (39%), Gaps = 154/800 (19%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+++ + V FPY + Y Q +M + TLD +GHC +LE P+GTGK++SLL +
Sbjct: 3 FYIDELPVLFPYPKIYPEQYAYMTDLKRTLDA---NGHC--VLEMPSGTGKTVSLLSLIV 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGF-----IPESQPSTIPPSTNGQTAQV 131
++Q K +L S + P+ E L + + E + S + + +
Sbjct: 58 SYQLFHPAKRKLIYCSRTVPEIEKALAELKRLMEYRARYNVKEGEESEVLKNEAEGSNGP 117
Query: 132 AMNNKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYV---R 188
+N +K K + Q+ +++ L+SRK+ C + V R
Sbjct: 118 GEHNVEMKGK--------GKAGGQMEDILA-----------LGLSSRKNLCIHPDVSRER 158
Query: 189 DKENIDEECKLLL-------GDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVG 241
+ +D C+ + G ++ G + + H+ G + V +E++
Sbjct: 159 KGKVVDARCRDMTSSWACEKGRQDPGTVELCDFHEKLGKMEPGQLIPQGVRTLEEVKEYA 218
Query: 242 QVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIAR 300
+ C Y+A R M ++ + Y+++P I + ++ K AI++ DEAHNI+++
Sbjct: 219 RDKGICPYFAIRRMLPFVDIIIYSFHYLLDPKIAEQVSKEMSKDAIVVFDEAHNIDNVCI 278
Query: 301 DAGSVDIDEDVLLKLQMELEQVCS-VNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHF 359
++ S+D+ +L + Q+ V+ + ++ + +E + +RE + F
Sbjct: 279 ESLSIDLTRPMLDSAYRSINQLSEHVDEIKKTDASKLQDEYARLVEGLQEQGEQREAESF 338
Query: 360 FS-CWTGDKALRELQEANISR-QCFPILLECATKAIKE--------ATDTESELPHLSGM 409
+ D L+E NI R + F L+ + +K A S L HL +
Sbjct: 339 MANPVLPDDLLQEAVPGNIRRAEHFVAFLKRFVEYLKTRMRVLHVVAETPASFLQHLKDI 398
Query: 410 SVITLEGL---------------------FSSL---TYFFSRNGSHVSDYQLALQKYIKR 445
+ I + L FS+L F + ++ + L L+ +
Sbjct: 399 TYIERKPLRFCAERLRMLVSTLELTRLDEFSALQKVAAFATLVATYDKGFLLILEPFETE 458
Query: 446 DSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLE 505
++ P + T CL+ ++ V E S+I+TSGT+SP++ + L +F ++
Sbjct: 459 NATVPNPIFHFT----CLDASLAIAPVFERFSSVIITSGTISPLDMYPKML--KFDAIVQ 512
Query: 506 APHVIDVDLQ-VLTSVISTGPDNYPLNASYKT---------------------ADG---- 539
+ + + Q L VI+ G D +++ ++ DG
Sbjct: 513 ESYAMTLTRQCFLPLVITRGSDQVAISSRFEVRNDPAVVRNYGSILIEYAKCVPDGIVAF 572
Query: 540 ---YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAV 596
Y ME + W + G + K +F+E + I L++Y + G
Sbjct: 573 FPSYLYMESIVAAWHDMGILDEVWKYKLIFIETPDAPETS--IALENYRRACDNG----- 625
Query: 597 VRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNIND---IQVSLKKK 653
+GA L+V RGK+ GI F + I + +
Sbjct: 626 -------------------------RGAILLSVARGKVSEGIDFDHNYGRAVIMFGVPYQ 660
Query: 654 YNDTYRSSKNL--------LSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQE 705
Y ++ L + N++ A R Q +GR +R + DYG ++ D+RF
Sbjct: 661 YTESRILKARLEFLRDNFRIRENDFLTFDAMRHAAQCVGRVLRGKTDYGLMVFADKRFAR 720
Query: 706 ERNRAHISKWLRKSIKQYDS 725
R + KW+ + IK+ S
Sbjct: 721 ADKRNKLPKWIAQYIKETHS 740
>gi|448115115|ref|XP_004202752.1| Piso0_001608 [Millerozyma farinosa CBS 7064]
gi|359383620|emb|CCE79536.1| Piso0_001608 [Millerozyma farinosa CBS 7064]
Length = 795
Score = 117 bits (292), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 174/826 (21%), Positives = 324/826 (39%), Gaps = 199/826 (24%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+++ + + FPY + Y Q +MC + TLD G+C +LE P+GTGK++SLL T+
Sbjct: 3 FYIDDLPILFPYPKIYPEQYSYMCDIKRTLDVG---GNC--ILEMPSGTGKTISLLSITV 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNK 136
A+Q + PE + T + + +
Sbjct: 58 AYQMH------------------------------YPEHRKVVYCSRTMSEIEKALIELH 87
Query: 137 NVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKEN---I 193
N+ K + Y + E++ L SRK+ C + V + +
Sbjct: 88 NLMKYRAEQLGY-----------VEEFRGLG-------LTSRKNLCLHPSVSKEPKGVVV 129
Query: 194 DEECKLLLGDRNLGCPQFKNVHKV-----RGHPSLQKGGCH--EVHDIED---------- 236
DE+C+ + N Q KV + HP ++ + E++D+E
Sbjct: 130 DEKCRRI---TNGQLKQQIENGKVSEEDQKRHPETKQLCSYHEELNDMEQHNLIPAGVYS 186
Query: 237 ---LVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEA 292
L N + C Y+ R M ++ Y Y+++P I + DI + +I+I DEA
Sbjct: 187 FDALTNYCKARGTCPYFTVRRMIPYCNIIIYSYHYLLDPKIAERVSKDISRDSIIIFDEA 246
Query: 293 HNIEDIARDAGSVDIDEDVLLKLQMELEQVC-SVNPMIYQPLIEMTQDLVGWIERRKATL 351
HNI+++ ++ S+D+ +D L + ++ +++ M Q ++ + +E + +
Sbjct: 247 HNIDNVCIESLSLDLTDDTLQRATRGATKLGDAIDDMKSQDSEKLQNEYEKLVEGLRQSE 306
Query: 352 AKREFQHFFSCWTGDK-ALRELQEANISR--------QCFPILLECATKAIKEATDT-ES 401
+RE + F S K L E NI + + F L+ K + ++T S
Sbjct: 307 IEREEELFMSNPILPKDLLDEAVPGNIRKGEHFISFLKRFIEYLKTRMKVLHVISETPTS 366
Query: 402 ELPHLSGMSVITLEGL---------------------FSSL---TYFFSRNGSHVSDYQL 437
L HL ++ I + L F++L F + ++ + +QL
Sbjct: 367 FLQHLKDLTFIDRKPLRFCSERLSLLVRTLELTEIEDFTALKDIATFATLVSTYETGFQL 426
Query: 438 ALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELG 497
L+ + S P L CL+ ++ K V + S+I+TSGT+SP++ + L
Sbjct: 427 ILEPFETEGSSVPNP----ILHFTCLDASIAIKPVFDRFSSVIITSGTISPLDMYPRMLN 482
Query: 498 VQFGTCLEAPHVIDVDLQ-VLTSVISTGPDNYPLNASYK--------------------- 535
F T ++ + I + + L +++ G D +++ ++
Sbjct: 483 --FQTVIQESYTITLARRSFLPMIVTKGADQVSISSRFEIRNDPSVVRNYGSLVIEFSKI 540
Query: 536 TADG-------YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSI 588
T DG Y ME + + W+ G + K + VE + + L+ + +
Sbjct: 541 TPDGMVVFFPSYLYMESIISMWQNMGVLDEVWKYKLILVETPDAQETS--LALETFRKAC 598
Query: 589 SQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPN---IND 645
S G +GA L+V RGK+ GI F +
Sbjct: 599 SNG------------------------------RGAVLLSVARGKVSEGIDFDHHYGRTV 628
Query: 646 IQVSLKKKYNDTYRSSKNL--------LSGNEWYCNQAFRALNQAIGRCIRHRFDYGAII 697
+ + + +Y ++ L + N++ A R Q +GR +R + DYG ++
Sbjct: 629 LMIGIPFQYTESRILKARLEFLRDHFQIRENDFLSFDAMRHAAQCLGRVLRGKDDYGIMV 688
Query: 698 LLDERFQEERNRAHISKWLRKSIKQYD---SFDASLEGLKSFFRDV 740
L D RF R ++ + KW+ +++ D S D +L K F R +
Sbjct: 689 LADRRFS--RKKSQLPKWIAQALLDSDTNLSTDMALANAKKFLRSL 732
>gi|56118508|ref|NP_001008131.1| excision repair cross-complementing rodent repair deficiency,
complementation group 2 [Xenopus (Silurana) tropicalis]
gi|51703768|gb|AAH81339.1| ercc2 protein [Xenopus (Silurana) tropicalis]
Length = 760
Score = 117 bits (292), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 182/818 (22%), Positives = 313/818 (38%), Gaps = 193/818 (23%)
Query: 19 HVGGIQVEFPYQ-PYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLA 77
++ G+ V FPY+ Y Q +M + TLD H +LE P+GTGK++SLL +A
Sbjct: 4 NIDGLLVYFPYEYIYPEQYSYMLELKRTLD-----AKGHGVLEMPSGTGKTVSLLSLIVA 58
Query: 78 WQQNCKLK-NQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNK 136
+Q+ L+ +L S + P+ E V + L I +Q T A + N
Sbjct: 59 YQRAYPLEVTKLIYCSRTVPEIEKVVEELRK---LIEYTQAQTGGTLNFMALALSSRRNL 115
Query: 137 NVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE 196
V +++ A R +I R H T +VR ++ D
Sbjct: 116 CVNPEVS-----ALRFGKEID-------------------GRCHSLTASFVRSQKQRDPT 151
Query: 197 CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMA 256
+ C F+ + L G +++++DL +G+ C YY AR
Sbjct: 152 VQ--------TCRFFEEFDAIGRETPLPPG----IYNLDDLRTLGRQKGWCPYYLARHAL 199
Query: 257 DDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLKL 315
+V Y Y+++P I + ++ K ++++ DEAHNI+++ D+ SV I L +
Sbjct: 200 GQCNVVVYSYHYLLDPKIADLVSRELSKKSVVVFDEAHNIDNVCIDSMSVTITRRTLERC 259
Query: 316 QMELEQVCSVNPMI-----------YQPLIEMTQD------------------------- 339
Q +E + + I Y L+E ++
Sbjct: 260 QTNIETLNTAIEKIKETDEKKLKEEYAQLVEGLREASVARETDVYLSNPVLPDEILQEAV 319
Query: 340 ---------LVGWIERRKATLAKREFQHFFSCWTGDKA-LRELQE-ANISRQCFPILLEC 388
+G++ RR K + G A LR+L E I R+ P+ C
Sbjct: 320 PGCIRNALHFLGFL-RRLVGYIKSRLRAGHVTQEGPAAFLRDLYEKVCIERK--PMRF-C 375
Query: 389 ATKAIKEATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDS- 447
A + ++ T T E+ ++ +S +TL F++L ++ + + ++ + R
Sbjct: 376 AER-LRSLTRT-LEIADITDLSPLTLITNFATLV------STYTKGFMIIIEPFEDRTPS 427
Query: 448 -KNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGT---- 502
NP L CL+ ++ K V + S+I+TSGTLSP++ + L + T
Sbjct: 428 ISNP------VLHFSCLDSSLAIKPVFQRFQSVIITSGTLSPLDIYPKILDFRPVTMATF 481
Query: 503 -------CLEAPHVIDV--DLQVLTSVISTGPD--------NYPLNASYKTADG------ 539
CL P V+ D ++S T D N L S DG
Sbjct: 482 TMTLARVCL-CPMVVGRGNDQVAMSSKFETREDLAVMRNYGNLLLEMSAVVPDGIVGFFT 540
Query: 540 -YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVR 598
Y ME + W E G + K +F+E + G++ + L+ Y + G
Sbjct: 541 SYLYMENIVASWYEQGILENIQRNKLIFIETQDGAETS--VALEKYQEACENG------- 591
Query: 599 KKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPF-------------PNIND 645
+GA L+V RGK+ GI F P +
Sbjct: 592 -----------------------RGAILLSVARGKVSEGIDFVHHYGRAVIMFGVPYVYT 628
Query: 646 IQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQE 705
LK + + + L N++ A R Q +GR IR + DYG ++ D+R+
Sbjct: 629 QSRILKARLQ--FLRDQFHLRENDFLTFDAMRHAAQCVGRAIRGKTDYGIMLFADKRYAR 686
Query: 706 ERNRAHISKWLRKSIKQYD---SFDASLEGLKSFFRDV 740
R + W+++ + + + D S+ + F R +
Sbjct: 687 SDKRGKLPLWIQEHLTDANLNLTLDESVHLARHFLRQM 724
>gi|319411548|emb|CBQ73592.1| related to CHL1-protein of the DEAH box family [Sporisorium
reilianum SRZ2]
Length = 932
Score = 116 bits (291), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 146/330 (44%), Gaps = 64/330 (19%)
Query: 463 LNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFG-----TCLEAPHVIDVDLQVL 517
LNP+ VFK + + + S+IL GT+ PM+ F +L + F HVI ++
Sbjct: 615 LNPSHVFKSLVDEARSVILAGGTMEPMSDFRQQL-LPFVPPDRLVTFSCGHVIPPS-NLM 672
Query: 518 TSVISTGPDNYPLNASYKTADGYKLMEKL-------CN---------------------R 549
SV+S P P + + D +L+++L CN R
Sbjct: 673 VSVLSASPKGLPFEFKFDSRDNLELVDELGRTLANLCNIIPAGLVVFVPSYAFLDKVMAR 732
Query: 550 WRET---GQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREG 606
W++ G RL +KK +F EPK + + + VL Y A +R K K
Sbjct: 733 WKDAASGGVLQRLGSKKKIFTEPK--TTMEVDKVLGEY---------TAAIRAKDAKTGA 781
Query: 607 NNDLNTIESQENANK--KGASFLA-VCRGKIVVGIPFPNINDIQVSLKKKY--------- 654
I K +G +F + RG ++VG+PF N++ +++ + KY
Sbjct: 782 AGGGGAIMFAVVGAKLSEGINFSDDLARGVVMVGMPFANMHSPELAERMKYVRELGVKSE 841
Query: 655 -NDTYRSSKN--LLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAH 711
N T S+ + G+E Y N +A+NQ+IGR +RH+ DY A+ILLD R+ R
Sbjct: 842 SNGTSSSTNKAAIDPGHELYTNLCMKAVNQSIGRAVRHQNDYAALILLDRRYARPEIRQR 901
Query: 712 ISKWLRKSIKQYDSFDASLEGLKSFFRDVK 741
+ W+R + D F ++ +FFR K
Sbjct: 902 LPGWIRDQVTVADRFGGMIQQTAAFFRGRK 931
Score = 109 bits (272), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/186 (35%), Positives = 98/186 (52%), Gaps = 21/186 (11%)
Query: 144 PTIFYASRTHSQISQVISEYKKTAY---------RVPMAV--LASRKHYCTNKYV----- 187
P + YASRTHSQ+SQ ++E KKT + ++P+ L SRK C N+ V
Sbjct: 244 PRVIYASRTHSQLSQFVAELKKTLFGQVDILDFEKLPVRTIGLGSRKQMCINEEVQRIGR 303
Query: 188 -RDKENIDEECKLLLGDRN--LGCPQFKNVHKVRGHPSLQ--KGGCHEVHDIEDLVNVGQ 242
R E ++E C L+ + CP +V L+ EV DIEDLV +G+
Sbjct: 304 SRGSEAMNERCLELMKAKKGKTKCPSLPPFDQVGRAQVLEFRDAAMAEVGDIEDLVQLGK 363
Query: 243 VVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDA 302
+ C Y+AARS A A+LV PY+ ++ R A+ + ++G I+++DEAHN+ D
Sbjct: 364 QTKTCPYFAARSSAKQAELVTLPYNLLLQKDARNALGISLEGCIVLIDEAHNLIDTILST 423
Query: 303 GSVDID 308
SV +D
Sbjct: 424 HSVTVD 429
Score = 53.9 bits (128), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 39/62 (62%), Gaps = 7/62 (11%)
Query: 24 QVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW-QQN 81
+ +FPY Q Y QL M +V ST++ DG L ESPTGTGKSLSL+C+ W +QN
Sbjct: 25 EFQFPYPQAYSIQLDLMRQVFSTIE----DGKV-GLFESPTGTGKSLSLICAAFTWLRQN 79
Query: 82 CK 83
+
Sbjct: 80 AE 81
>gi|358399042|gb|EHK48385.1| hypothetical protein TRIATDRAFT_214371 [Trichoderma atroviride IMI
206040]
Length = 769
Score = 116 bits (291), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 171/771 (22%), Positives = 308/771 (39%), Gaps = 147/771 (19%)
Query: 39 MCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCKLKNQLANISHSKPDT 98
MC + TLD GHC +LE P+GTGK++SLL +A+QQ+ K +L S + +
Sbjct: 1 MCDLKKTLDAG---GHC--VLEMPSGTGKTVSLLSLIVAYQQHMPEKRKLIYCSRTMSEI 55
Query: 99 EAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKKMTPTIFYASRTHSQISQ 158
E L + + E G T++ KN+ + P++ R S
Sbjct: 56 EKALVELQSLMKYRAEELGYEEEFRGLGLTSR-----KNL--CLHPSV---KREKSG--- 102
Query: 159 VISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEECKLLLGDRNLGCPQFKNVHKVR 218
+V+ +R T +V++K++ E + C N+ +
Sbjct: 103 --------------SVVDARCRSLTAGFVKEKKDRGENVDV--------CVYHDNLDLLE 140
Query: 219 GHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAM 278
H + G V + L+ G+ + C Y+ AR M +V Y Y+++P I +
Sbjct: 141 PHNLIPNG----VWSFDALLKYGEEHKQCPYFTARRMMQYCNVVIFSYHYLLDPKIAERV 196
Query: 279 EVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLK----LQMELEQVCSVNPMIYQPL 333
D K I++ DEAHNI+++ ++ S DI ED + K Q ++ + + L
Sbjct: 197 TKDFSKDCIVVFDEAHNIDNVCIESLSTDITEDSIRKATRSAQHLERRIAEMRETDQEQL 256
Query: 334 IEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRELQEANISR--------QCFPIL 385
+ LV + R+A +++E + D L+E NI R + F
Sbjct: 257 QNEYEKLVQGL--READESRQEDAFMANPALPDDLLKEAVPGNIRRAEHFVAFLKRFLEY 314
Query: 386 LECATKAIKEATDTE-SELPHLSGMSVI-----------------TLEGL-------FSS 420
L+ K + ++T S L HL + I TLE +
Sbjct: 315 LKTRMKVRQVISETPLSFLAHLKEHTFIERKPLRFCAERLTSLVRTLELMNIEDYQALQE 374
Query: 421 LTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSII 480
+ F + ++ + L L+ Y ++ P TL CL+ A+ + V E S+I
Sbjct: 375 VATFATLVATYEKGFLLILEPYESDTAEVPNP----TLHFTCLDAAIAIRPVFERFYSVI 430
Query: 481 LTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQ-VLTSVISTGPDNYPLNASYK---- 535
+TSGT+SP+ + L F T ++ + + + + L +++ G D +++S++
Sbjct: 431 ITSGTISPLEMYPKML--DFATVIQESYSMTLARRSFLPMIVTRGSDQASVSSSFQVRNE 488
Query: 536 -----------------TADG-------YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKG 571
T DG Y ME + + W+ G + K + VE
Sbjct: 489 PSVVRNYGNLLTEFAKITPDGLVVFFPSYLYMESIISMWQGMGILDEVWKYKLILVETPD 548
Query: 572 GSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCR 631
+ + L+ Y + G ++ R K D + ++ G R
Sbjct: 549 AQETS--LALETYRTACCNGRGAILLCVARGKVSEGIDFD--------HQYG-------R 591
Query: 632 GKIVVGIPFPNINDIQVSLKKKY-NDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHR 690
+ +G+PF + + ++ +TYR + N++ A R Q +GR +R +
Sbjct: 592 TVLCIGVPFQYTESRILKARLEFLRETYR-----IKENDFLSFDAMRHAAQCLGRVLRGK 646
Query: 691 FDYGAIILLDERFQEERNRAHISKWLRKSIKQYD---SFDASLEGLKSFFR 738
DYG ++L D RFQ + R + KW+ + + D S D ++ + F +
Sbjct: 647 DDYGVMVLADRRFQ--KKRTQLPKWINQGLSDADTNLSTDMAVSSARRFLK 695
>gi|190405726|gb|EDV08993.1| DNA repair helicase RAD3 [Saccharomyces cerevisiae RM11-1a]
gi|207345787|gb|EDZ72494.1| YER171Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 780
Score = 116 bits (291), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 174/798 (21%), Positives = 317/798 (39%), Gaps = 155/798 (19%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+++ + V FPY + Y Q +MC + TLD +++LE P+GTGK++SLL T+
Sbjct: 3 FYIDDLPVLFPYPKIYPEQYNYMCDIKKTLDVGG-----NSILEMPSGTGKTVSLLSLTI 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNK 136
A+Q + ++ S + + E L N + +T ++
Sbjct: 58 AYQMHYPEHRKIIYCSRTMSEIEKALVELENLMDY---------------RTKELGYQED 102
Query: 137 NVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE 196
+T SR + + +S+ +K V+ + TN + K D E
Sbjct: 103 FRGLGLT------SRKNLCLHPEVSKERKG------TVVDEKCRRMTNGQAKRKLEEDPE 150
Query: 197 CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMA 256
+ L C +N++ + L KG V E L+ + C Y+ R M
Sbjct: 151 ANVEL------CEYHENLYNIEVEDYLPKG----VFSFEKLLKYCEEKTLCPYFIVRRMI 200
Query: 257 DDAQLVFCPYSYIINPVI--RGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLL- 313
++ Y Y+++P I R + EV K +I+I DEAHNI+++ ++ S+D+ D L
Sbjct: 201 SLCNIIIYSYHYLLDPKIAERVSNEVS-KDSIVIFDEAHNIDNVCIESLSLDLTTDALRR 259
Query: 314 ---------------------KLQMELEQVC-----------SVNPMIYQPLIE---MTQ 338
KLQ E E++ P + P++ +T+
Sbjct: 260 ATRGANALDERISEVRKVDSQKLQDEYEKLVQGLHSADILTDQEEPFVETPVLPQDLLTE 319
Query: 339 DLVGWIERRK--ATLAKREFQHFFSCWTGDKALRELQEANIS-RQCFPILLECATKAIKE 395
+ G I R + + KR ++ T K L + E S Q L K ++
Sbjct: 320 AIPGNIRRAEHFVSFLKRLIEYL---KTRMKVLHVISETPKSFLQHLKQLTFIERKPLRF 376
Query: 396 ATDTESELPHLSGMSVITLEGL--FSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGN 453
++ S L + + V +E + F + ++ + L ++ Y ++ P
Sbjct: 377 CSERLSLL--VRTLEVTEVEDFTALKDIATFATLISTYEEGFLLIIEPYEIENAAVPNPI 434
Query: 454 WTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVD 513
T CL+ ++ K V E S+I+TSGT+SP++ + L F T L+ + + +
Sbjct: 435 MRFT----CLDASIAIKPVFERFSSVIITSGTISPLDMYPRMLN--FKTVLQKSYAMTLA 488
Query: 514 LQ-VLTSVISTGPDNYPLNASYK---------------------TADG-------YKLME 544
+ L +I+ G D +++ ++ T DG Y ME
Sbjct: 489 KKSFLPMIITKGSDQVAISSRFEIRNDPSIVRNYGSMLVEFAKITPDGMVVFFPSYLYME 548
Query: 545 KLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKR 604
+ + W+ G + K + VE + + L+ Y + S G ++ R K
Sbjct: 549 SIVSMWQTMGILDEVWKHKLILVETPDAQETS--LALETYRKACSNGRGAILLSVARGKV 606
Query: 605 EGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKY-NDTYRSSKN 663
D + ++ G R +++GIPF + + ++ + YR
Sbjct: 607 SEGIDFD--------HQYG-------RTVLMIGIPFQYTESRILKARLEFMRENYR---- 647
Query: 664 LLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQY 723
+ N++ A R Q +GR +R + DYG ++L D RF R R+ + KW+ + +
Sbjct: 648 -IRENDFLSFDAMRHAAQCLGRVLRGKDDYGVMVLADRRFS--RKRSQLPKWIAQGLSDA 704
Query: 724 D---SFDASLEGLKSFFR 738
D S D ++ K F R
Sbjct: 705 DLNLSTDMAISNTKQFLR 722
>gi|398365073|ref|NP_011098.3| Rad3p [Saccharomyces cerevisiae S288c]
gi|131812|sp|P06839.1|RAD3_YEAST RecName: Full=DNA repair helicase RAD3; AltName: Full=General
transcription and DNA repair factor IIH subunit RAD3;
Short=TFIIH subunit RAD3
gi|4269|emb|CAA26215.1| unnamed protein product [Saccharomyces cerevisiae]
gi|172331|gb|AAA34943.1| RAD3 protein [Saccharomyces cerevisiae]
gi|603412|gb|AAB64698.1| Rad3p: DNA repair helicase component of transcription factor b
[Saccharomyces cerevisiae]
gi|151944888|gb|EDN63147.1| transcription initiation factor TFIIH subunit [Saccharomyces
cerevisiae YJM789]
gi|256271309|gb|EEU06379.1| Rad3p [Saccharomyces cerevisiae JAY291]
gi|259146100|emb|CAY79360.1| Rad3p [Saccharomyces cerevisiae EC1118]
gi|285811805|tpg|DAA07833.1| TPA: Rad3p [Saccharomyces cerevisiae S288c]
gi|323305313|gb|EGA59060.1| Rad3p [Saccharomyces cerevisiae FostersB]
gi|323355348|gb|EGA87173.1| Rad3p [Saccharomyces cerevisiae VL3]
gi|349577832|dbj|GAA23000.1| K7_Rad3p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392299876|gb|EIW10968.1| Rad3p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 778
Score = 116 bits (291), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 174/798 (21%), Positives = 317/798 (39%), Gaps = 155/798 (19%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+++ + V FPY + Y Q +MC + TLD +++LE P+GTGK++SLL T+
Sbjct: 3 FYIDDLPVLFPYPKIYPEQYNYMCDIKKTLDVGG-----NSILEMPSGTGKTVSLLSLTI 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNK 136
A+Q + ++ S + + E L N + +T ++
Sbjct: 58 AYQMHYPEHRKIIYCSRTMSEIEKALVELENLMDY---------------RTKELGYQED 102
Query: 137 NVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE 196
+T SR + + +S+ +K V+ + TN + K D E
Sbjct: 103 FRGLGLT------SRKNLCLHPEVSKERKG------TVVDEKCRRMTNGQAKRKLEEDPE 150
Query: 197 CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMA 256
+ L C +N++ + L KG V E L+ + C Y+ R M
Sbjct: 151 ANVEL------CEYHENLYNIEVEDYLPKG----VFSFEKLLKYCEEKTLCPYFIVRRMI 200
Query: 257 DDAQLVFCPYSYIINPVI--RGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLL- 313
++ Y Y+++P I R + EV K +I+I DEAHNI+++ ++ S+D+ D L
Sbjct: 201 SLCNIIIYSYHYLLDPKIAERVSNEVS-KDSIVIFDEAHNIDNVCIESLSLDLTTDALRR 259
Query: 314 ---------------------KLQMELEQVC-----------SVNPMIYQPLIE---MTQ 338
KLQ E E++ P + P++ +T+
Sbjct: 260 ATRGANALDERISEVRKVDSQKLQDEYEKLVQGLHSADILTDQEEPFVETPVLPQDLLTE 319
Query: 339 DLVGWIERRK--ATLAKREFQHFFSCWTGDKALRELQEANIS-RQCFPILLECATKAIKE 395
+ G I R + + KR ++ T K L + E S Q L K ++
Sbjct: 320 AIPGNIRRAEHFVSFLKRLIEYL---KTRMKVLHVISETPKSFLQHLKQLTFIERKPLRF 376
Query: 396 ATDTESELPHLSGMSVITLEGL--FSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGN 453
++ S L + + V +E + F + ++ + L ++ Y ++ P
Sbjct: 377 CSERLSLL--VRTLEVTEVEDFTALKDIATFATLISTYEEGFLLIIEPYEIENAAVPNPI 434
Query: 454 WTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVD 513
T CL+ ++ K V E S+I+TSGT+SP++ + L F T L+ + + +
Sbjct: 435 MRFT----CLDASIAIKPVFERFSSVIITSGTISPLDMYPRMLN--FKTVLQKSYAMTLA 488
Query: 514 LQ-VLTSVISTGPDNYPLNASYK---------------------TADG-------YKLME 544
+ L +I+ G D +++ ++ T DG Y ME
Sbjct: 489 KKSFLPMIITKGSDQVAISSRFEIRNDPSIVRNYGSMLVEFAKITPDGMVVFFPSYLYME 548
Query: 545 KLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKR 604
+ + W+ G + K + VE + + L+ Y + S G ++ R K
Sbjct: 549 SIVSMWQTMGILDEVWKHKLILVETPDAQETS--LALETYRKACSNGRGAILLSVARGKV 606
Query: 605 EGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKY-NDTYRSSKN 663
D + ++ G R +++GIPF + + ++ + YR
Sbjct: 607 SEGIDFD--------HQYG-------RTVLMIGIPFQYTESRILKARLEFMRENYR---- 647
Query: 664 LLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQY 723
+ N++ A R Q +GR +R + DYG ++L D RF R R+ + KW+ + +
Sbjct: 648 -IRENDFLSFDAMRHAAQCLGRVLRGKDDYGVMVLADRRFS--RKRSQLPKWIAQGLSDA 704
Query: 724 D---SFDASLEGLKSFFR 738
D S D ++ K F R
Sbjct: 705 DLNLSTDMAISNTKQFLR 722
>gi|407420088|gb|EKF38458.1| helicase-like protein, putative [Trypanosoma cruzi marinkellei]
Length = 956
Score = 116 bits (291), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 103/354 (29%), Positives = 163/354 (46%), Gaps = 55/354 (15%)
Query: 26 EFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNC-KL 84
+ P++PY Q M R I+ ++ A +E PTG GK+L+LL S L +Q KL
Sbjct: 14 DMPFEPYPVQREMM-RTITNCLQSSSPVFPVAAVEVPTGCGKTLALLSSVLRYQATLEKL 72
Query: 85 KNQLA--NISHSK--------PDTEAVTDPLANGGGFIPESQPSTIPP------------ 122
Q ++ H + P + + LA G S+ IP
Sbjct: 73 TPQELEQHMRHRRWRPAATFFPKSSLDEETLAGDGKSKNNSKGKRIPDDAVDGEEKWRVP 132
Query: 123 --------STNGQTAQVAMNNK--NVKKKMTP---TIFYASRTHSQISQVISEYKKT--A 167
+ N + +V M+ +++++ P T+FY +RTHSQ+ Q + E +K
Sbjct: 133 TEFFKQFRTNNSKRLRVEMDGTPWSLRRQHEPPPCTVFYVTRTHSQVRQAVGELRKLHGL 192
Query: 168 YRVPMAVLASRKHYCTNKYVR----------DKENIDEECKLL--LGDRNLGCPQFKNVH 215
+R+ M +L SR+ YC N V + N+ E C L LG C
Sbjct: 193 HRLKMNILGSRERYCINSTVLKARANKTLPVEGNNLGEICDKLVSLGQCEAVCNYGILGS 252
Query: 216 KVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIR 275
+ HP L +G +V D+EDLV G + C YYA R + A + F Y Y+++P+IR
Sbjct: 253 RAISHP-LHQGRLEKVWDMEDLVAEGVATQSCPYYATRELVFFAHVNFATYQYLLDPLIR 311
Query: 276 G--AMEVDIKG-AILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQVCSVN 326
ME +K +I+I DEAHN+ + +DA S++ D LL + E+E + + +
Sbjct: 312 HECKMEAALKNHSIIIFDEAHNVPSVCQDALSLETTLDNLLLVVSEIEPLITFS 365
Score = 115 bits (288), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 146/310 (47%), Gaps = 42/310 (13%)
Query: 450 PGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFG--TCLEAP 507
P T+ + CL+ ++ F + ++ ++L SGTL+P + +LG+ E
Sbjct: 545 PRPTMRRTVGIRCLDGSLAFHHLLAVTHRVVLASGTLAPFHQLGQDLGISLSEMATYEGL 604
Query: 508 HVIDVDLQVLTSVISTGPDNYPLNASYKTADGYKLMEKLCNRWRETGQWSRLNAKKPLFV 567
H+ DV Q SV++ D L+ +Y +++L + E + RL L
Sbjct: 605 HIADVH-QYRISVLTHMMDGARLHCNYGNFRDASFIDRLVSVILEIVKQVRLGGV--LVF 661
Query: 568 EPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLN---TIESQENANKKG- 623
P IV++ + +S A R+ RV E + ++ +++ ++
Sbjct: 662 LPN-------YIVMRVVGSRLSSRLLDATGRELRVFIEPKDAMSFPSILDTFRAVTRRST 714
Query: 624 ASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSGN 668
A FL+VCR K I VGIP ++ V +++Y SG
Sbjct: 715 AIFLSVCRAKVGEGIDFADNMARLVICVGIPLRPLHSWVVVAQRRY-----------SGE 763
Query: 669 EWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDA 728
EWY A RA+NQA+GRC+R+R DYGA++LLD+RF++ + +SKW S+K + + +
Sbjct: 764 EWYVTDAIRAVNQALGRCLRNRHDYGAMVLLDDRFEQGDFQKRLSKWCAGSLKVHHTLAS 823
Query: 729 SLEGLKSFFR 738
++ L +F+R
Sbjct: 824 VIKELSTFYR 833
>gi|302901601|ref|XP_003048472.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256729405|gb|EEU42759.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 761
Score = 116 bits (291), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 190/852 (22%), Positives = 330/852 (38%), Gaps = 205/852 (24%)
Query: 43 ISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCKLKNQLANISHSKPDTEAVT 102
+ TLD GHC +LE P+GTGK++SLL +A+QQ
Sbjct: 1 MQTLDAG---GHC--VLEMPSGTGKTVSLLSLIVAYQQ---------------------- 33
Query: 103 DPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKKMTPTIFYASRTHSQISQVISE 162
++PE K+K+ Y SRT S+I + + E
Sbjct: 34 --------YMPE------------------------KRKL----IYCSRTMSEIEKALVE 57
Query: 163 YKK-TAYRVPMAV---------LASRKHYCTNKYVRDKEN---IDEECKLLLG------- 202
K YR L SRK+ C + V+ +++ +D C+ L
Sbjct: 58 LKSLMKYRAEELGYEEEFRGLGLTSRKNLCLHPSVKREKSGSVVDARCRSLTAGFVKEKK 117
Query: 203 DRNLG---CPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDA 259
DR C N+ + H + G V +D++ G+ + C Y+ AR M
Sbjct: 118 DRGENVDVCVYHDNLDLLEPHNLIPNG----VWSFDDIIRYGEEHKQCPYFTARRMMQYC 173
Query: 260 QLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLKL--- 315
+V Y Y+++P I + D K I++ DEAHNI+++ ++ S DI ED L K
Sbjct: 174 NVVIFSYHYLLDPKIAERVSKDFSKDCIVVFDEAHNIDNVCIESLSTDITEDSLRKATRG 233
Query: 316 QMELE-QVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRELQE 374
LE ++ + + L Q LV + R A A++E + L+E
Sbjct: 234 AQNLENRIAQMRDTDQEQLQNEYQKLVQGL--RDAEEARQEDAFMANPALPADLLQEAVP 291
Query: 375 ANISR--------QCFPILLECATKAIKEATDTE-SELPHLSGMSVITLEGL------FS 419
NI R + F L+ K + ++T S L HL + I + L +
Sbjct: 292 GNIRRAEHFVAFLKRFIEYLKTRMKVRQVISETPPSFLAHLKEHTFIEKKPLRFCAERLT 351
Query: 420 SLTYFFSRNGSHVSDYQ--------------------LALQKYIKRDSKNPGGNWTHTLS 459
SL + +++ DYQ L L+ Y ++ P L
Sbjct: 352 SLVR--TLELTNIEDYQPLQEVATFATLVSTYEKGFLLILEPYESDTAEVPNP----ILH 405
Query: 460 LWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQ-VLT 518
CL+ A+ + V E S+I+TSGT+SP+ + L F T ++ + + + + L
Sbjct: 406 FTCLDAAIAIRPVFERFYSVIITSGTISPLEIYPKML--DFSTVIQESYSMTLARRSFLP 463
Query: 519 SVISTGPDNYPLNASYK---------------------TADG-------YKLMEKLCNRW 550
+++ G D ++ S++ T DG Y ME + + W
Sbjct: 464 MIVTRGSDQASVSTSFQVRNEPSVVRNYGNLLTEFAKITPDGMVVFFPSYLYMESIISMW 523
Query: 551 RETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDL 610
+ G + K + VE + + L+ Y + G ++ R K D
Sbjct: 524 QGMGILDEVWKYKLILVETPDAQETS--LALETYRTACCNGRGAVLLCVARGKVSEGIDF 581
Query: 611 NTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKY-NDTYRSSKNLLSGNE 669
+ ++ G R + +G+PF + + ++ +TYR + N+
Sbjct: 582 D--------HQYG-------RTVLCIGVPFQYTESRILKARLQFLRETYR-----IKEND 621
Query: 670 WYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYD---SF 726
+ A R Q +GR +R + DYG ++L D RFQ + R + KW+ + +++ D S
Sbjct: 622 FLSFDAMRHAAQCLGRVLRGKDDYGIMVLADRRFQ--KKRTQLPKWINQGLQEADVNLST 679
Query: 727 DASLEGLKSFFRDVKGWVGKKMFNGLEN--SDNDVDHVSSMDQCKEVTKQNTQELNKSDH 784
D ++ + F R + K G+ + ++H MD + +EL ++
Sbjct: 680 DMAVSSARRFLRTMAQPFRAKDQEGISTWGYKDLMEHKEKMDL------ERIKELEEAAQ 733
Query: 785 SGQNVQSISKYD 796
Q I++Y+
Sbjct: 734 KPQPAAPINQYE 745
>gi|410963605|ref|XP_003988355.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein 8
[Felis catus]
Length = 907
Score = 116 bits (291), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 167/730 (22%), Positives = 282/730 (38%), Gaps = 186/730 (25%)
Query: 146 IFYASRTHSQISQVISEYKKTAY--RVPMAVLASRKHYCTNKYVRDKENIDEECKLLLGD 203
I+Y SRTHSQ++Q + E +++ + + L SR++ C N+ V++ + L+ D
Sbjct: 229 IYYCSRTHSQLAQFVHEVQRSPFGKDTRLVSLGSRQNLCINEDVKNLGSAQ-----LIND 283
Query: 204 RNLGCPQFKNVHKVRGHPSLQKGGCHE-----------------------VHDIEDLVNV 240
R + + K+ K R K E V DIE LV++
Sbjct: 284 RCMEMQRSKHGKKSRAEDEKPKRRRQEHQAACPFYSYEQLQLLRDEVLVGVKDIEQLVSL 343
Query: 241 GQVVRGCSYY----------------------AARSMAD---DAQLVFCPYSYIINPVIR 275
G+ R C YY A R A Q+V ++ + I
Sbjct: 344 GKEARACPYYGSRFAIPAAQLVVLPYQMLLHGATRQAAGIRLQGQVVVIDEAHNLIDTIT 403
Query: 276 GAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLK-LQMELEQVCSV--------- 325
G ++ G+ + ++ + R + + +K L LEQ +V
Sbjct: 404 GIYSAEVSGSQFCQAHSQLLQYMERYGKRLKAKNLMYIKQLLYLLEQFVTVLGGNIKQNP 463
Query: 326 ---------------NPMIYQPLIE---------------MTQDLVGWIERRKATLAK-R 354
N ++Q I+ +++ L G+ ER LA R
Sbjct: 464 NTQSLSQTGTELKTINDFLFQSQIDNINLFKVRRYCEKSMVSRKLFGFTERYGTVLASSR 523
Query: 355 E------FQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSG 408
E FQHF L+ LQ P L E + + E+ +P S
Sbjct: 524 EQSRLAGFQHF---------LQSLQ---------PALTETP---VPHGDEGEARVPR-SA 561
Query: 409 MSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVV 468
++ +EG ++LT +++G + + Q G +L LNPAV
Sbjct: 562 SPLMHIEGFLAALTTA-NQDGRVILNRQ--------------GSLSLSSLKFLLLNPAVH 606
Query: 469 FKDVAELSLSIILTSGTLSPMNSFSSEL----GVQFGTCLE--APHVIDVDLQVLTSVIS 522
F V + ++++ GT+ P++ F +L GV+ +E HVI D +L VI
Sbjct: 607 FAQVVKECRAVVIAGGTMQPVSDFREQLLACAGVEAERVVEFSCGHVIPPD-NILPLVIC 665
Query: 523 TGPDNYPLNASYKTADGYKLMEK-------LCN---------------------RWRETG 554
+GP + L +Y+ + ++M++ LCN W ++G
Sbjct: 666 SGPSSQQLEFTYQKRELPQMMDETGRILYNLCNVVPGGVVCFFPSYEYQRQVHAHWDKSG 725
Query: 555 QWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIE 614
+RL +K +F EPK +Q E VL Y I KC V G L+ +
Sbjct: 726 LLARLAVRKKIFQEPKRANQ--VEQVLLEYSRCI----KCCGHAGGAVT--GALLLSVVG 777
Query: 615 SQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYNDTY--RSSKNLLSGNEWYC 672
+ + + L C ++VG+P+PNI ++ K Y D R G
Sbjct: 778 GKMSEGINFSDDLGRC--VVMVGMPYPNIKSPELQEKMAYLDQTLPRIPGQPPPGKALVE 835
Query: 673 NQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEG 732
N +A+NQ+IGR IRH+ D+ +I+LLD R+ + W+R ++ +F +
Sbjct: 836 NLCMKAVNQSIGRAIRHQKDFASIVLLDHRYARPPVLGKLPAWIRDRVEVKATFGPAFAA 895
Query: 733 LKSFFRDVKG 742
++ F R+ G
Sbjct: 896 MRKFHRERPG 905
Score = 57.8 bits (138), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 44/88 (50%), Gaps = 9/88 (10%)
Query: 21 GGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQ 80
GGI FP+ PY Q FM + LD + + ESPTGTGKSLSL+C L+W +
Sbjct: 9 GGIHFPFPFTPYSIQKDFMAELYRVLDAGK-----IGIFESPTGTGKSLSLICGALSWLR 63
Query: 81 NCKLKNQLANISHSKPDTEAVTDPLANG 108
+ + K E T PL++G
Sbjct: 64 DFEQKKH----QEEARLLETGTVPLSDG 87
>gi|383850034|ref|XP_003700633.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8-like [Megachile rotundata]
Length = 861
Score = 116 bits (290), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 157/333 (47%), Gaps = 56/333 (16%)
Query: 450 PGGNWTHTL-SLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLE--- 505
PG ++ + LNPA F D+ + S ++IL GT++PMN F+ +L + G E
Sbjct: 549 PGATLGQSIIKFFLLNPAAHFHDIVQDSRAVILAGGTMAPMNEFTEQLFIAAGAAPERIV 608
Query: 506 ---APHVIDVDLQVLTSVISTGPDNYPLNASYKTADGYKLMEKL-------CN------- 548
HV+ + ++ S+ + GP +Y+ KLM++L CN
Sbjct: 609 TFSCDHVVPKE-NIICSIATHGPTGVEFEFNYQNRQNIKLMDELGRALLNVCNIVPAGIV 667
Query: 549 --------------RWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKC 594
++G ++++AKK +F EPK SQ + +L+ Y
Sbjct: 668 VFLPSYNFEELVYKHLEKSGIITKISAKKHVFREPKSTSQVNE--ILEQY---------A 716
Query: 595 AVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKY 654
A + K R + G+ + + + + + L C IVVG+P+PNI ++ K KY
Sbjct: 717 AHIEKPRSPQNGSLLFSVVGGKLSEGLNFSDNLGRCI--IVVGMPYPNIKSPELQEKMKY 774
Query: 655 -NDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHIS 713
N+ ++ +G Y N +A+NQ IGR IRH DY +ILLD+R+ + +A +
Sbjct: 775 LNENVKAD----AGQNLYENSCMKAVNQCIGRAIRHINDYSTVILLDKRY-SNKTKA-LP 828
Query: 714 KWLRKSIKQYDSFDASLEGLKSFFRDVKGWVGK 746
+W+++++ +++F + + + FF K V K
Sbjct: 829 QWIQRALIIHNNFGSMIGAMAKFFSKKKKEVQK 861
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 104/191 (54%), Gaps = 16/191 (8%)
Query: 146 IFYASRTHSQISQVISEYKKTAY--RVPMAVLASRKHYCTNKYVRDKEN---IDEECKLL 200
IF+ SRTHSQ+SQ I E KK+ Y V + LASR++YC NK VR ++ I+E+C L
Sbjct: 198 IFFCSRTHSQLSQFIRELKKSPYSKNVSVVPLASRQNYCINKNVRKLKHQNLINEQC-LQ 256
Query: 201 LGDRNLGCPQFKNVHKVR---------GHPSLQKG-GCHEVHDIEDLVNVGQVVRGCSYY 250
L + K+V + + G+ L G E+ DIE++V G+ + C+YY
Sbjct: 257 LQKKKATVKDEKDVKRKKVATSCPFMPGNQDLLIGETLIEIQDIEEIVQKGEDYKTCAYY 316
Query: 251 AARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDED 310
AAR QL+ PY+ +++ R + +++KG ILI+DEAHN+ + SV I
Sbjct: 317 AARKAVPTGQLILVPYNSVLHKNTRISSGINLKGNILIIDEAHNLLEAIERMHSVMITGR 376
Query: 311 VLLKLQMELEQ 321
LL +L Q
Sbjct: 377 NLLHCHSQLSQ 387
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 5/52 (9%)
Query: 27 FPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
FP+ PY Q+ FM + + L+ A+ + ESPTGTGKS+S++C L W
Sbjct: 9 FPFPPYSIQVQFMKELYNCLENAKL-----GIFESPTGTGKSMSIICGALKW 55
>gi|413944885|gb|AFW77534.1| hypothetical protein ZEAMMB73_555309, partial [Zea mays]
Length = 590
Score = 116 bits (290), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 137/608 (22%), Positives = 242/608 (39%), Gaps = 145/608 (23%)
Query: 233 DIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEA 292
DIEDL +G+ + C YY +R M A LV PY ++ R ++ +++K +++I+DEA
Sbjct: 22 DIEDLAQIGKKIGTCPYYGSRDMVRSADLVVLPYQSLLLKSARESLGLNLKNSVVIIDEA 81
Query: 293 HNIEDIARDAGSVDID----EDVLLKLQMELEQVCSV----NPMIYQPLIEMTQDLVGWI 344
HN+ D + + I + VL L L++ +V N Q L +T+ + +
Sbjct: 82 HNLADSLSNMYNSKITSSQLKAVLSCLDEYLDRFYNVLGAGNRRYIQTLTVLTKSFIRVL 141
Query: 345 ---ERRKATLAKREFQHFFSCWTGD-----KALRELQEANISRQCFPILLECATKAIKEA 396
+ +T++ F D K + ++E+NI + C +
Sbjct: 142 INNQDGASTMSSMTINQFLFSLDIDNINIVKLCQFVKESNIIHKV------CGYANKLSS 195
Query: 397 TDTESELP-HLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWT 455
+ +L H G S+ + L L + N D ++ + K + GG
Sbjct: 196 IQNQFDLQLHDEGSSIACFQALVDFLRSLLNSN----DDGRIIVAK------QKLGGQPD 245
Query: 456 HT-LSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSEL-------GVQFGTCLEAP 507
L L +F +V + + ++IL GTL P+ L ++F TC
Sbjct: 246 EAYLKFVMLCAEKIFSEVTQDAYAVILAGGTLQPIEETRLRLCPSLPPTDIKFFTC---N 302
Query: 508 HVIDVDLQVLTSVISTGPDNYPLNASYKTADGYKLMEKL----CN--------------- 548
H++ + +L ++ GP + SY + ++E+L CN
Sbjct: 303 HIVPPE-SILPIAVTRGPSGKAFDFSYNSRSSPSMIEELGRFICNIITVVPEGVVMFFSS 361
Query: 549 ---------RWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRK 599
W TG SR++ KK +F EP+ + D E VL Y +I S +
Sbjct: 362 YDYERRVYDAWMTTGTISRISKKKHVFREPRNSA--DVEAVLNKYKEAIESCSNFS---- 415
Query: 600 KRVKREGNNDLNTIESQENANKKGASFLAVCRGKI---------------VVGIPFPNIN 644
++ GA LAV GKI +VG+P+P+ +
Sbjct: 416 -----------------QDTGVNGALLLAVVGGKISEGINFSNGMGRCVIMVGLPYPSPS 458
Query: 645 DIQV--------------------SLKKKYNDT--YRSSKNLL-----SGNEWYCNQAFR 677
D+++ +L +KY+D + ++L G E+Y N +
Sbjct: 459 DVELIETIKHIESISSSFSVGDDKALSRKYDDECELQPGYDILRKCTRGGREYYENLCMK 518
Query: 678 ALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHIS-------KWLRKSIKQYDSFDASL 730
A+NQ+IGR IRH DY A++L+D R+ + + S +W++ + ++
Sbjct: 519 AVNQSIGRAIRHINDYAAMLLVDSRYAQTSSTKSFSCPADKLPQWIKARLSCAQNYGEVH 578
Query: 731 EGLKSFFR 738
L FF+
Sbjct: 579 RSLHQFFK 586
>gi|344278065|ref|XP_003410817.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8-like [Loxodonta africana]
Length = 904
Score = 116 bits (290), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 140/337 (41%), Gaps = 77/337 (22%)
Query: 457 TLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLE------APHVI 510
+L LNPAV F V + ++++ GT+ P++ F +L G E HVI
Sbjct: 592 SLKFLLLNPAVHFTQVVKECRAVVIAGGTMQPVSDFREQLLACAGVGAERVVEFSCGHVI 651
Query: 511 DVDLQVLTSVISTGPDNYPLNASYKTADGYKLMEK-------LCN--------------- 548
D +L +I +GP N L +Y+ + ++M++ LCN
Sbjct: 652 PPD-NILPLIICSGPSNQQLEFTYQKRELPQMMDETGRILCNLCNVVPGGVVCFFPSYEY 710
Query: 549 ------RWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRV 602
RW ++G RL KK +F EPK +Q E VL Y I KC
Sbjct: 711 LRQVYARWEQSGLLVRLAVKKKIFQEPKRANQ--VEQVLMEYSKCI----KCC------- 757
Query: 603 KREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQ 647
Q GA L+V GK ++VG+P+PNI +
Sbjct: 758 ------------GQAAGTMTGALLLSVVGGKMSEGINFSDNLGRCVVMVGMPYPNIKSPE 805
Query: 648 VSLKKKYNDTY--RSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQE 705
+ K Y D R+ G N +A+NQ++GR IRH+ D+ +I+LLD+R+
Sbjct: 806 LQEKMAYLDQTLPRTPGQAPPGKALVENLCMKAVNQSVGRAIRHQKDFASIVLLDQRYAR 865
Query: 706 ERNRAHISKWLRKSIKQYDSFDASLEGLKSFFRDVKG 742
A + W+R ++ +F + L+ F R+ G
Sbjct: 866 PPTLAKLPAWIRDRVEVKATFGPAFAALRKFHREKSG 902
Score = 83.6 bits (205), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 96/205 (46%), Gaps = 38/205 (18%)
Query: 146 IFYASRTHSQISQVISEYKKTAY--RVPMAVLASRKHYCTNKYVRDKENIDEECKLLLGD 203
I+Y SRTHSQ++Q + E +K+ + + L SR++ C N+ V++ ++ L+ D
Sbjct: 226 IYYCSRTHSQLAQFVHEVQKSPFGKDTRLVSLGSRQNLCVNEDVKNLGSVQ-----LVND 280
Query: 204 RNL---------------------------GCPQFKNVHKVRGHPSLQKGGCHEVHDIED 236
R + CP F N +++ L+ EV DIE
Sbjct: 281 RCMEMQRSKHEKKSEAEEEKPKRRRQEGQAACP-FYNYEQMQ---LLRDEVLVEVKDIEQ 336
Query: 237 LVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIE 296
LV +G+ R C YY +R AQLV PY +++ R A V ++G ++I+DEAHN+
Sbjct: 337 LVAMGKEARACPYYGSRFAIPAAQLVVLPYQMLLHAATRQAAGVRLQGQVVIIDEAHNLI 396
Query: 297 DIARDAGSVDIDEDVLLKLQMELEQ 321
D S ++ L + +L Q
Sbjct: 397 DAITSIHSTELSGSQLCQAHSQLLQ 421
Score = 58.9 bits (141), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 37/59 (62%), Gaps = 5/59 (8%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
VGGI+ FPY PY Q FM + L+ A + G + ESPTGTGKSLSL+C L+W
Sbjct: 8 VGGIKFPFPYTPYSIQKDFMTELYKVLE-AGKIG----IFESPTGTGKSLSLICGALSW 61
>gi|295123971|gb|ADF79587.1| CG4078 [Drosophila melanogaster]
Length = 235
Score = 116 bits (290), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 104/179 (58%), Gaps = 10/179 (5%)
Query: 143 TPTIFYASRTHSQISQVISEYKKTAY-RVPMAVLASRKHYCTNKYV-RDKENIDEE--CK 198
P + YASRTHSQ++Q + E K+TAY + VL SR C + V R++ N ++ CK
Sbjct: 36 VPKVIYASRTHSQLTQAMRELKRTAYANMRSVVLGSRDQLCIHPEVMREQGNSNKTNMCK 95
Query: 199 LLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADD 258
L + + C V + HP L+ + DIEDLV VGQ ++ C Y+A+R +
Sbjct: 96 LRVHSKT--CSFQMRVESRKDHPDLRGPT---IMDIEDLVKVGQRLKICPYFASRELVPQ 150
Query: 259 AQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDI-DEDVLLKLQ 316
A + F PY+Y+++P R A ++++ I+ILDEAHNIE I ++ SV I DV + ++
Sbjct: 151 ADITFMPYNYLLDPKARKANKIELGNTIVILDEAHNIEKICEESASVQIKSSDVAMAIE 209
>gi|440302531|gb|ELP94838.1| HELICc2 domain containing protein, partial [Entamoeba invadens IP1]
Length = 484
Score = 116 bits (290), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/251 (31%), Positives = 117/251 (46%), Gaps = 66/251 (26%)
Query: 540 YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRK 599
YK+MEK+ W + L K +F+E K ++DF + Y KCA
Sbjct: 31 YKIMEKIHKLWECRKTLNELRKHKTVFIEQK--RRKDFLRDFEEY-------KKCA---- 77
Query: 600 KRVKREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNIN 644
+GA FL V RGK I+VGIP+PN+
Sbjct: 78 ---------------------NQGAVFLGVFRGKLSEGIDFGDNLARVVIIVGIPYPNLG 116
Query: 645 DIQVSLKKKYND-TYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERF 703
D+ V +KK+YN+ + + GN+WY QA RA+NQA+GR IRH+ D+GAI+LLD R+
Sbjct: 117 DLNVKMKKQYNNAVVQQEGKGVDGNQWYAIQAMRAVNQAVGRVIRHKNDFGAIMLLDMRY 176
Query: 704 QEERNRAHISKWLRKSIKQ-YDSFDASLEGLKSFFRDVKGWVGKKMFNGLENSDNDVDHV 762
NR +S W++K I+ + ++ LE K F G+ DV
Sbjct: 177 NRPNNRKMMSGWIQKEIQNGKEGWNLELE---------------KFFKGMGEQFKDVGDD 221
Query: 763 SSMDQCKEVTK 773
++M++ KE +K
Sbjct: 222 TAMEEKKEESK 232
>gi|212531953|ref|XP_002146133.1| TFIIH complex helicase Rad3, putative [Talaromyces marneffei ATCC
18224]
gi|210071497|gb|EEA25586.1| TFIIH complex helicase Rad3, putative [Talaromyces marneffei ATCC
18224]
Length = 794
Score = 116 bits (290), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 180/816 (22%), Positives = 316/816 (38%), Gaps = 194/816 (23%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+ + ++V FPY + Y Q +MC + LD + GHC +LE P+GTGK+++LL +
Sbjct: 3 FKIDELEVLFPYPKIYPEQWQYMCDLKKALDAS---GHC--VLEMPSGTGKTVTLLSLIV 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNK 136
A+QQ+ +L S + + + L + S G T
Sbjct: 58 AYQQHHGDSRKLIYCSRTMSEIDKALHELKALMKY---------RASQLGYTEDFRGLGL 108
Query: 137 NVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE 196
+ +K + H + + +K+ AV+ +R T +V K+ E+
Sbjct: 109 SSRKNLC--------LHPSVKR-----EKSG-----AVVDARCRSLTASFVVQKKERGED 150
Query: 197 CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMA 256
+ C N+ + H ++ G V DL+ Q C Y+ R M
Sbjct: 151 VE--------TCTYHDNLDLLEPHNLIEPG----VFTFGDLLRYCQEKVTCPYFTVRRML 198
Query: 257 DDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLL-- 313
++ Y Y+++P I + ++ K I++ DEAHNI+++A ++ S+D+ ED L
Sbjct: 199 PYCNVIIYSYHYLLDPKIAERVSRELSKDCIVVFDEAHNIDNVAIESLSIDLTEDSLRKA 258
Query: 314 --------------------KLQMEL---------------EQVCSVNPMIYQPL----- 333
KLQ E E + NP++ Q L
Sbjct: 259 SRGAKNLERKIEEMKSSDAEKLQSEYTKLVEGLKATEEARDEDLIMSNPVLPQDLLSEAV 318
Query: 334 ---IEMTQDLVGWIERRKATLAKR-EFQHFFSCWTGD--KALRELQ--EANISRQCFPIL 385
I + + +++R L R + H S T + LREL EA R C
Sbjct: 319 PGNIRRAEHFIAFLQRFIQYLMTRMKVTHTISETTPSFLQHLRELVFIEAKPLRFCS--- 375
Query: 386 LECATKAIKEATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKR 445
E T ++ EL ++ + +F++L + R + L L+ +
Sbjct: 376 -ERLTSLVRTL-----ELMNIEDYQPLQEVAMFATLVSTYDRG------FLLILEPFESE 423
Query: 446 DSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLE 505
+ P L L CL+ A+ F+ V E SI++TSGTL+P++ F L F L+
Sbjct: 424 AATVPNP----VLHLACLDAAIAFRPVVERFSSIVVTSGTLTPLDMFPKMLN--FTPVLQ 477
Query: 506 APHVIDVDLQ-VLTSVISTGPDNYPLNASYKT---------------------ADG---- 539
+ + + + L +++ G D +++S++T DG
Sbjct: 478 ESYTMTLARRSFLPMIVTRGSDQSQISSSFQTRNDPSNLRNFGSLLLDFAKIVPDGIVVF 537
Query: 540 ---YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAV 596
Y ME + W G + K + VE + + L+ Y + G
Sbjct: 538 FPSYLYMESTLHVWSGMGILDMIWNYKLILVETPDAQESS--LALETYRTACCNG----- 590
Query: 597 VRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPN-----INDIQVSLK 651
+GA ++V RGK+ G+ F + + I V +
Sbjct: 591 -------------------------RGAILMSVARGKVAEGVDFDHQYGRAVICIGVPFQ 625
Query: 652 KKYNDTYRSSKNLL------SGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQE 705
+ R+ L N++ A R +Q +GR IR + DYG ++L D+RF
Sbjct: 626 YTESRILRARLEFLRENYGIRENDFLSFDAMRHASQCLGRVIRGKDDYGIMVLADKRFA- 684
Query: 706 ERNRAHISKWLRKSIKQYD---SFDASLEGLKSFFR 738
R R+ + KW+ ++I + + S D ++ K+F R
Sbjct: 685 -RKRSQLPKWISQNILESEVNLSTDMAVATAKNFLR 719
>gi|307210249|gb|EFN86899.1| TFIIH basal transcription factor complex helicase subunit
[Harpegnathos saltator]
Length = 735
Score = 116 bits (290), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 165/765 (21%), Positives = 298/765 (38%), Gaps = 196/765 (25%)
Query: 53 GHCHALLESPTGTGKSLSLLCSTLAWQQNCKLK-NQLANISHSKPDTEAVTDPLANGGGF 111
GHC LLE P+GTGK+++LL +A+ L +L S + P+ E V + L +
Sbjct: 12 GHC--LLEMPSGTGKTITLLSLIVAYMLEYPLNVTKLIYCSRTVPEIEKVIEELKKLIDY 69
Query: 112 IPESQPSTIPPSTNGQTAQVAMNNKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVP 171
S P G + +SR + I +S ++
Sbjct: 70 YETETKSK--PKIVG-------------------LVLSSRKNMCIHPEVSREREGK---- 104
Query: 172 MAVLASRKHYCTNKYVRDKENIDEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEV 231
++ R H T YVR++ N DE + C F + G + G +
Sbjct: 105 --IVDGRCHSLTASYVRERHNHDESTPI--------C-NFYEGFDMEGREQIVPPG---I 150
Query: 232 HDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILD 290
+ ++DL + G+ C Y+ AR AQ+V Y Y+++P I + ++ K ++++ D
Sbjct: 151 YSLDDLKDYGKDRGWCPYFLARFTILHAQIVVYSYHYLLDPKIAETVSKELSKSSVVVFD 210
Query: 291 EAHNIEDIARDAGSVDIDEDVLL----------------------KLQMELEQVCS---- 324
EAHNI+++ D+ SV I++ ++ KL+ E +++ +
Sbjct: 211 EAHNIDNVCIDSMSVKINKKLMERSTNNIQLLEKTVAEMRDCDVNKLKEEYDRLVAGLRD 270
Query: 325 -----------VNPMIYQPLIEM--------TQDLVGWIERRKATLAKR-EFQHFFSCWT 364
NP++ ++E + V +++R L R QH +
Sbjct: 271 AQLARETDVILANPVLPDEILEEIVPGNIRNAEHFVSFLKRFVEYLKTRLRVQHVMQ-ES 329
Query: 365 GDKALRELQEANISRQCFPILLECATKAIKEATDTE-SELPHLSGMSVIT-LEGLFSSLT 422
LR++Q A +S + P+ CA + E +++ S + ++T L L S+ T
Sbjct: 330 PAAFLRDIQ-AKVSIERKPLRF-CAQRLASLLRTMEITDMTDFSPIILVTHLATLVSTYT 387
Query: 423 YFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILT 482
+ F+ + ++ + D K P L CL+ ++ K + + S+I+T
Sbjct: 388 HGFT----------IIVEPF---DDKTPTV-LNPILHFSCLDSSIAIKPIFDRFQSVIIT 433
Query: 483 SGTLSPMNSFSSELGVQ------FGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKT 536
SGTLSP++ + L F L P +L +++ G D +++ Y+T
Sbjct: 434 SGTLSPLDMYPKILNFHPVIMSSFTMTLARP-------CLLPMIVAKGNDQVAISSKYET 486
Query: 537 ---------------------ADG-------YKLMEKLCNRWRETGQWSRLNAKKPLFVE 568
DG Y ME + W + G +L K LF+E
Sbjct: 487 REDVAVIRNYGQLLVEFAATVPDGLVCFFTSYLYMESVVAAWYDQGVVDQLQRHKLLFIE 546
Query: 569 PKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLA 628
+ ++ ++ N I++ EN +GA L+
Sbjct: 547 TQDSAETSLALI------------------------------NYIKACENG--RGAVLLS 574
Query: 629 VCRGKIVVGIPF-------------PNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQA 675
V RGK+ G+ F P + LK + Y + + N++ A
Sbjct: 575 VARGKVSEGVDFDHHLGRAVLMFGIPYVYTQSRILKARLE--YLRDQFQIRENDFLTFDA 632
Query: 676 FRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSI 720
R Q +GR IR + DYG ++ D+RF R+ + KW+++ +
Sbjct: 633 MRHAAQCVGRAIRGKTDYGIMVFADKRFSRVDKRSKLPKWIQEHL 677
>gi|159152216|gb|ABW92616.1| CG4078-PA [Drosophila melanogaster]
Length = 234
Score = 115 bits (289), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 104/179 (58%), Gaps = 10/179 (5%)
Query: 143 TPTIFYASRTHSQISQVISEYKKTAY-RVPMAVLASRKHYCTNKYV-RDKENIDEE--CK 198
P + YASRTHSQ++Q + E K+TAY + VL SR C + V R++ N ++ CK
Sbjct: 36 VPKVIYASRTHSQLTQAMRELKRTAYANMRSVVLGSRDQLCIHPEVMREQGNSNKTNMCK 95
Query: 199 LLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADD 258
L + + C V + HP L+ + DIEDLV VGQ ++ C Y+A+R +
Sbjct: 96 LRVHSKT--CSFQMRVESRKDHPDLRGPT---IMDIEDLVKVGQRLKICPYFASRELVPQ 150
Query: 259 AQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDI-DEDVLLKLQ 316
A + F PY+Y+++P R A ++++ I+ILDEAHNIE I ++ SV I DV + ++
Sbjct: 151 ADITFMPYNYLLDPKARKANKIELGNTIVILDEAHNIEKICEESASVQIKSSDVAMAIE 209
>gi|367055120|ref|XP_003657938.1| hypothetical protein THITE_2124189 [Thielavia terrestris NRRL 8126]
gi|347005204|gb|AEO71602.1| hypothetical protein THITE_2124189 [Thielavia terrestris NRRL 8126]
Length = 800
Score = 115 bits (289), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 184/839 (21%), Positives = 338/839 (40%), Gaps = 152/839 (18%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+++ + V FPY + Y Q +M + TLD G+C +LE P+GTGK+++LL +
Sbjct: 3 FNIDDLPVLFPYPRIYPEQYAYMVDLKKTLDAG---GNC--VLEMPSGTGKTVTLLSLIV 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNK 136
A+QQ +L S + + E L F AQ + +
Sbjct: 58 AYQQYYPSHRKLIYCSRTMSEIEKALVELKALMKF----------------RAQRLGHEE 101
Query: 137 NVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE 196
+ + SR + + + K V+ +R T +V++K+N E+
Sbjct: 102 EFR-----GLGLTSRKNLCLHPSVKREKSG------NVVDARCRSLTAGFVKEKKNKGED 150
Query: 197 CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMA 256
++ C N+ + H + G + ++ L+ G+ + C Y+ AR M
Sbjct: 151 VEV--------CVYHDNLDLLEPHNLIPNG----IWTLDGLLRYGEQHKQCPYFTARRMM 198
Query: 257 DDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLKL 315
++ Y Y+++P I + D+ K I++ DEAHNI+++ ++ S DI ED L +
Sbjct: 199 QYCNVIIYSYHYLLDPKIAERVSKDLSKDCIVVFDEAHNIDNVCIESLSTDITEDSLRRA 258
Query: 316 QMELEQVCS-VNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWT-GDKALRELQ 373
+ + + +N M ++ + +E + R+ F + T D L+E
Sbjct: 259 TRGAQNLENRINEMRESDQQKLQDEYEKLVEGLRGADDGRQEDSFMANPTLPDDLLKEAV 318
Query: 374 EANISR--------QCFPILLECATKAIKEATDT-ESELPHLSGMSVITLEGL------F 418
NI R + F L+ K + ++T S L HL + I + L
Sbjct: 319 PGNIRRAEHFVAFLRRFIEYLKTRMKVRQVISETPPSFLAHLKEYTFIEKKPLRFCAERL 378
Query: 419 SSLTYFFSRNGSHVSDYQ--------------------LALQKYIKRDSKNPGGNWTHTL 458
+SL + +++ DYQ L L+ Y ++ P L
Sbjct: 379 TSLVR--TLELTNIEDYQPLQEVATFATLVATYEKGFLLILEPYESDTAEVPNP----VL 432
Query: 459 SLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQ-VL 517
CL+ A+ K V + S+I+TSGT+SP+ + L F T ++ + + + + L
Sbjct: 433 HFTCLDAAIAIKPVFDRFSSVIITSGTISPLEMYPKMLN--FPTVVQESYSMTLARRSFL 490
Query: 518 TSVISTGPDNYPLNASYK---------------------TADG-------YKLMEKLCNR 549
+++ G D ++ S++ T DG Y ME + +
Sbjct: 491 PMIVTRGSDQASISTSFQVRNEPSVVRNYGNLLTEFAKITPDGMVVFFPSYLYMESIISM 550
Query: 550 WRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNND 609
W+ G + K + VE ++ + L+ Y + G ++ R K D
Sbjct: 551 WQGMGILDEVWKYKLILVETPDA--QETSLALETYRTACCNGRGAVLLCVARGKVSEGID 608
Query: 610 LNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKY-NDTYRSSKNLLSGN 668
+ ++ G R + VG+PF + + ++ +TYR + N
Sbjct: 609 FD--------HQYG-------RTVLCVGVPFQYTESRILKARLEFLRETYR-----IREN 648
Query: 669 EWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYD---S 725
++ A R Q +GR +R + DYG ++L D RFQ + RA + KW+ +++ D S
Sbjct: 649 DFLSFDAMRHAAQCLGRVLRGKDDYGLMVLADRRFQ--KKRAQLPKWINQALLDADTNLS 706
Query: 726 FDASLEGLKSFFRDVKGWVGKKMFNGLEN-SDNDV-DHVSSMDQ--CKEVTKQNTQELN 780
D ++ + F + + K G+ S D+ H MD+ K++ Q +ELN
Sbjct: 707 TDMAVSSARRFLKTMAQPFRAKDQEGISTWSLADLRRHQEKMDEERIKDLQAQRDRELN 765
>gi|449547579|gb|EMD38547.1| hypothetical protein CERSUDRAFT_113726 [Ceriporiopsis subvermispora
B]
Length = 794
Score = 115 bits (289), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 176/809 (21%), Positives = 320/809 (39%), Gaps = 169/809 (20%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+H+ + + FPY + Y Q +MC + TLD GHC +LE P+GTGK++SLL +
Sbjct: 3 FHIDDLPIIFPYDRIYPEQYAYMCDLKRTLDAT---GHC--VLEMPSGTGKTVSLLSLIV 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNK 136
++QQ K +L S + P+ E L + T +T + +
Sbjct: 58 SYQQFYPNKRKLIYCSRTVPEIEKALAELKRLMDY----------RMTCAETEEEKAKEQ 107
Query: 137 NVKKKMTPTIFYA----SRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKEN 192
N FY SR + + +S+ KK V+ +R TN V +K
Sbjct: 108 N---------FYGLGLTSRKNLCLHPEVSKEKKG------RVVDARCRDLTNSAVCEK-- 150
Query: 193 IDEECKLLLGDRNLGCPQFKNVHKVRGH---PSLQKGGCHEVHDIEDLVNVGQVVRGCSY 249
G +N G + + H+ G +L G + D+ + G+ R C Y
Sbjct: 151 ---------GRQNPGSVELCDWHENLGQMEPGNLIPPGIWTLADV---LQYGRDKRVCPY 198
Query: 250 YAARSMADDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDID 308
+ R M ++ + Y+++P + + ++ K AI++ DEAHNI+++ ++ S+D+
Sbjct: 199 FLVRRMMPFVDVIIYSFHYLLDPKVAEQVSREVSKDAIVVFDEAHNIDNVCIESLSIDLT 258
Query: 309 EDVL----------------------LKLQMELEQVCS-------------VNPMIYQPL 333
+L KLQ E ++ NP++ + L
Sbjct: 259 RPMLDSAARSVGRLGEKIEEIKKTDASKLQDEYAKLVEGLQEASQDEDSFMANPVLPEDL 318
Query: 334 --------IEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRELQEAN-ISRQCFPI 384
I + V +++R L R T L+ L++ I R+ P+
Sbjct: 319 LKEAIPGNIRKAEHFVAFLKRFVEYLKTRMRVLHVVAETPLSFLQHLKDITYIERR--PL 376
Query: 385 LLECATKAIKEATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIK 444
CA + ++ EL L +S + F++L ++ + L L+ +
Sbjct: 377 RF-CAERL--QSLVRTLELNRLDELSALQKVAGFATLV------ATYEKGFLLILEPFET 427
Query: 445 RDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCL 504
++ P L CL+PA+ K V E ++++TSGT+SP++ + L QF +
Sbjct: 428 DNATVPNP----IFHLTCLDPAIAIKPVFERFSTVVITSGTISPLDMYPKML--QFTPVV 481
Query: 505 EAPHVIDVDLQ-VLTSVISTGPDNYPLNASYK---------------------TADG--- 539
+ + + + L VI+ G D +++ ++ DG
Sbjct: 482 QETYSMTLTRNSFLPLVITRGSDQVAISSRFEVRNDPAVVRNFGSILVEYSKIVPDGIVA 541
Query: 540 ----YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCA 595
Y ME + W + G + + K +FVE ++ I L++Y + G
Sbjct: 542 FFPSYLYMESIVAAWNDMGILNEVWKHKLIFVETPDANET--SIALENYRRACDNGRGAV 599
Query: 596 VVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKY- 654
++ R K D + + G R I+ G+P+ + + +Y
Sbjct: 600 LLSVARGKVSEGIDFD--------HNYG-------RAVIMFGVPYQYTESRILKARLEYL 644
Query: 655 NDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISK 714
D YR + +E+ A R Q +GR +R + D+G ++ D+RF RA + +
Sbjct: 645 RDAYR-----IRESEFLGFDAMRTAAQCVGRVLRGKTDWGLMVFADKRFARADKRAKLPR 699
Query: 715 WLRKSIKQYD---SFDASLEGLKSFFRDV 740
W+ + I + S D +L K F R +
Sbjct: 700 WINQYITETASNLSTDMALTLSKLFMRTI 728
>gi|402588914|gb|EJW82847.1| hypothetical protein WUBG_06243, partial [Wuchereria bancrofti]
Length = 550
Score = 115 bits (289), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/323 (28%), Positives = 145/323 (44%), Gaps = 60/323 (18%)
Query: 457 TLSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQ 515
TL+ WC +P+V + + S+I+TSGTLSP++SF + LG+ F LE H +VD Q
Sbjct: 11 TLNYWCFSPSVAMWYLHSGGVRSVIVTSGTLSPLDSFINNLGISFPVTLENQHAANVD-Q 69
Query: 516 VLTSVISTGPDNYPLNASYK---------------------TADG-------YKLMEKLC 547
+L + I + L ++ DG Y M
Sbjct: 70 ILCARIRSSQSGIDLCGTFHKRSSSAYVFGIGEVIVRACQIIPDGILVFFSSYVTMNTCL 129
Query: 548 NRWRETG-----QWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKK-R 601
W+ W + A K FVEPK S+ + + VL + + +GS A++ R
Sbjct: 130 KFWKTLKFGPMFIWKTILAYKEAFVEPK--SKLELKAVLLQFRQQVREGSNGAILFAVCR 187
Query: 602 VKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYNDTYRSS 661
K D ES RG IV+GIP+ D ++ LK+++ R +
Sbjct: 188 AKVSEGIDFLDSES---------------RGVIVIGIPYAPTMDPRIELKRQFLTKQRMA 232
Query: 662 ------KNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKW 715
+ +S +EWY +A R++NQ+IGR +RH+ D+G +IL D RF ++ S W
Sbjct: 233 VAKQELRKNVSADEWYQVEAIRSVNQSIGRVLRHKNDFGVVILADSRFCSMSSKRFPS-W 291
Query: 716 LRKSIKQYDSFDASLEGLKSFFR 738
+R+ +K Y + K FF+
Sbjct: 292 MRECLKNYQDISDFEDECKQFFK 314
>gi|159152200|gb|ABW92608.1| CG4078-PA [Drosophila melanogaster]
gi|159152202|gb|ABW92609.1| CG4078-PA [Drosophila melanogaster]
gi|159152204|gb|ABW92610.1| CG4078-PA [Drosophila melanogaster]
gi|159152206|gb|ABW92611.1| CG4078-PA [Drosophila melanogaster]
gi|159152208|gb|ABW92612.1| CG4078-PA [Drosophila melanogaster]
gi|159152210|gb|ABW92613.1| CG4078-PA [Drosophila melanogaster]
gi|159152212|gb|ABW92614.1| CG4078-PA [Drosophila melanogaster]
gi|159152214|gb|ABW92615.1| CG4078-PA [Drosophila melanogaster]
gi|159152218|gb|ABW92617.1| CG4078-PA [Drosophila melanogaster]
gi|159152220|gb|ABW92618.1| CG4078-PA [Drosophila melanogaster]
gi|295123967|gb|ADF79585.1| CG4078 [Drosophila melanogaster]
gi|295123969|gb|ADF79586.1| CG4078 [Drosophila melanogaster]
gi|295123973|gb|ADF79588.1| CG4078 [Drosophila melanogaster]
gi|295123975|gb|ADF79589.1| CG4078 [Drosophila melanogaster]
gi|295123977|gb|ADF79590.1| CG4078 [Drosophila melanogaster]
gi|295123979|gb|ADF79591.1| CG4078 [Drosophila melanogaster]
gi|295123981|gb|ADF79592.1| CG4078 [Drosophila melanogaster]
gi|295123983|gb|ADF79593.1| CG4078 [Drosophila melanogaster]
gi|295123985|gb|ADF79594.1| CG4078 [Drosophila melanogaster]
gi|295123987|gb|ADF79595.1| CG4078 [Drosophila melanogaster]
Length = 235
Score = 115 bits (289), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 104/179 (58%), Gaps = 10/179 (5%)
Query: 143 TPTIFYASRTHSQISQVISEYKKTAY-RVPMAVLASRKHYCTNKYV-RDKENIDEE--CK 198
P + YASRTHSQ++Q + E K+TAY + VL SR C + V R++ N ++ CK
Sbjct: 36 VPKVIYASRTHSQLTQAMRELKRTAYANMRSVVLGSRDQLCIHPEVMREQGNSNKTNMCK 95
Query: 199 LLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADD 258
L + + C V + HP L+ + DIEDLV VGQ ++ C Y+A+R +
Sbjct: 96 LRVHSKT--CSFQMRVESRKDHPDLRGPT---IMDIEDLVKVGQRLKICPYFASRELVPQ 150
Query: 259 AQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDI-DEDVLLKLQ 316
A + F PY+Y+++P R A ++++ I+ILDEAHNIE I ++ SV I DV + ++
Sbjct: 151 ADITFMPYNYLLDPKARKANKIELGNTIVILDEAHNIEKICEESASVQIKSSDVAMAIE 209
>gi|295123965|gb|ADF79584.1| CG4078 [Drosophila melanogaster]
Length = 234
Score = 115 bits (289), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 104/179 (58%), Gaps = 10/179 (5%)
Query: 143 TPTIFYASRTHSQISQVISEYKKTAY-RVPMAVLASRKHYCTNKYV-RDKENIDEE--CK 198
P + YASRTHSQ++Q + E K+TAY + VL SR C + V R++ N ++ CK
Sbjct: 36 VPKVIYASRTHSQLTQAMRELKRTAYANMRSVVLGSRDQLCIHPEVMREQGNSNKTNMCK 95
Query: 199 LLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADD 258
L + + C V + HP L+ + DIEDLV VGQ ++ C Y+A+R +
Sbjct: 96 LRVHSKT--CSFQMRVESRKDHPDLRGPT---IMDIEDLVKVGQRLKICPYFASRELVPQ 150
Query: 259 AQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDI-DEDVLLKLQ 316
A + F PY+Y+++P R A ++++ I+ILDEAHNIE I ++ SV I DV + ++
Sbjct: 151 ADITFMPYNYLLDPKARKANKIELGNTIVILDEAHNIEKICEESASVQIKSSDVAMAIE 209
>gi|392595870|gb|EIW85193.1| DNA repair helicase [Coniophora puteana RWD-64-598 SS2]
Length = 787
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 172/798 (21%), Positives = 318/798 (39%), Gaps = 146/798 (18%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+ + + + FPY + Y Q +MC + TLD GHC +LE P+GTGK++SLL +
Sbjct: 3 FFIDNLPIIFPYDRIYPEQYAYMCDLKRTLDAT---GHC--VLEMPSGTGKTVSLLSLIV 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNK 136
++QQ K +L S + P+ E L + I + + + N +
Sbjct: 58 SYQQFYPNKRKLIYCSRTVPEIEKALAELKRLMEY-------RIKCAETTEQKEKEENFR 110
Query: 137 NVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE 196
+ SR + I +++ KK V+ +R TN V K D
Sbjct: 111 GLG--------LTSRKNLCIHPEVAKEKKG------KVVDARCRDLTNSAVCAKGREDP- 155
Query: 197 CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMA 256
G L C +N+ K+ + G VH + D++ G+ C Y+ R M
Sbjct: 156 -----GSVEL-CEWHENLGKLEPGSLISPG----VHTLADVLEHGRANGTCPYFTVRRMM 205
Query: 257 DDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVL--- 312
+V + Y+++P + + ++ K AI++ DEAHNI+++ ++ S+D+ +L
Sbjct: 206 PFVDVVIYSFHYLLDPKVAEQVSKEMSKDAIVVFDEAHNIDNVCIESLSIDLTRPMLDSA 265
Query: 313 ----LKLQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKA 368
+KL ++E++ + ++ + +E + A E + +
Sbjct: 266 ARSVVKLGDKIEEIKRTDAA------KLQDEYARLVEGLQEPAAPEEDSFMSNPVLPEDL 319
Query: 369 LRELQEANISR--------QCFPILLECATKAIKEATDTE-SELPHLSGMSVI------- 412
L E NI + + F L+ + + +T S L HL ++ I
Sbjct: 320 LSEAIPGNIRKAEHFVAFLKRFVEYLKTRMRVLHVVAETPLSFLQHLKDITYIERRPLRF 379
Query: 413 ----------TLE----GLFSSL---TYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWT 455
TLE +SSL F + ++ + L L+ + + P +
Sbjct: 380 CAERLQSMIRTLELSRLDEYSSLQKVASFATLVATYEKGFLLILEPFETDSATVPNPMFH 439
Query: 456 HTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQ 515
T CL+P++ K V E S+++TSGT+SP++ + L QF ++ + + +
Sbjct: 440 FT----CLDPSLAIKPVFERFSSVVITSGTISPLDMYPKML--QFTPVVQESYSMTLARN 493
Query: 516 V-LTSVISTGPDNYPLNASYK---------------------TADG-------YKLMEKL 546
L VI+ G D +++ ++ DG Y ME +
Sbjct: 494 TFLPLVITRGSDQVAISSRFEVRNDPAVVRNFGSILIEYSKIVPDGIVAFFPSYLYMESI 553
Query: 547 CNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREG 606
W + G + + K +FVE ++ I L++Y + G ++ R K
Sbjct: 554 VAAWNDMGILTEVWKNKLIFVETPDANETS--IALENYRRACDNGRGAVLLSVARGKVSE 611
Query: 607 NNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKY-NDTYRSSKNLL 665
D + + G R I+ G+P+ + + +Y D YR +
Sbjct: 612 GIDFD--------HNYG-------RAVIMFGVPYQYTESRILKARLEYLRDAYR-----I 651
Query: 666 SGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYD- 724
+E+ A R Q +GR +R + D+G ++ D+RF RA + +W+ + I +
Sbjct: 652 RESEFLGFDAMRNAAQCVGRVLRGKTDWGLMVFADKRFARADKRAKLPRWINQYITEVAS 711
Query: 725 --SFDASLEGLKSFFRDV 740
S D ++ K F R +
Sbjct: 712 NLSTDMAITLSKLFMRTI 729
>gi|240278769|gb|EER42275.1| DNA repair helicase RAD3 [Ajellomyces capsulatus H143]
Length = 773
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 159/690 (23%), Positives = 289/690 (41%), Gaps = 136/690 (19%)
Query: 146 IFYASRTHSQISQVISEYKK-TAYRVPMAVLA---------SRKHYCTNKYVRDKEN--- 192
+ Y SRT S+I + ++E K YR A SRK+ C + V+ +++
Sbjct: 45 LIYCSRTMSEIEKALAELKALMKYRAQQLGFAEDFRGLGLTSRKNLCLHPSVKREKSGAV 104
Query: 193 IDEECKLLL----------GDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQ 242
+D C+ L G+ C +N+ + + G V ++D+ G+
Sbjct: 105 VDARCRSLTAGFVKEKKEKGEDVELCIYHENLDLLEPSNLVPPG----VFTLDDITKYGE 160
Query: 243 VVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARD 301
+ C Y++ R M +++ Y Y+++P I + ++ K +I++ DEAHNI+++ +
Sbjct: 161 QHKQCPYFSVRRMMPFCKVIIYSYHYLLDPKIAERVSQELSKDSIVVFDEAHNIDNVCIE 220
Query: 302 AGSVDIDEDVLLK-------LQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKR 354
+ S+D+ ED L K L+ ++E++ + + L Q LV + R+A A++
Sbjct: 221 SLSIDLTEDSLRKASRGANNLERKIEEMKRSDA---EKLQNEYQKLVEGL--READEARQ 275
Query: 355 EFQHFFSCWTGDKALRELQEANISR-QCFPILLECATKAIK---EATDTESELP-----H 405
E Q + D L+E NI R + F L+ + +K + T T SE P H
Sbjct: 276 EEQLMANPALPDDLLKEAVPGNIRRAEHFVAFLKRFIEYLKTRMKITHTISETPLSFLAH 335
Query: 406 LSGMSVI-----------------TLEGL-------FSSLTYFFSRNGSHVSDYQLALQK 441
L ++ I TLE + + F + ++ + L L+
Sbjct: 336 LKDLTFIERKPLRFCAERLTSLVRTLELVNLEDYQPLQQVAAFATLAATYEKGFLLILEP 395
Query: 442 YIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFG 501
+ + P L CL+ A+ K V + S+I+TSGTLSP+ + L +F
Sbjct: 396 FESETATVPNP----ILHFTCLDAAIAIKPVFDRFSSVIVTSGTLSPLEMYPKML--KFT 449
Query: 502 TCLEAPHVIDVDLQ-VLTSVISTGPDNYPLNASYK---------------------TADG 539
T L+ + + + + L V++ G D +++S++ T DG
Sbjct: 450 TVLQESYTMTLARRSFLPMVVTRGSDQAQISSSFQIRNDPGVVRNYGNLLLEFSRITPDG 509
Query: 540 -------YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGS 592
Y ME + + W+ G + K + VE SQE + L+ Y + G
Sbjct: 510 VVVFFPSYLYMESIISMWQGMGILDLVWNYKLILVETP-DSQES-SLALETYRTACCNGR 567
Query: 593 KCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKK 652
++ R K D + + G R I +G+PF + +
Sbjct: 568 GAVLLCVARGKVSEGIDFD--------HHYG-------RAVICIGVPFQYTESRILKARL 612
Query: 653 KY-NDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAH 711
++ + YR + N++ A R Q +GR IR + DYG ++L D RFQ + R
Sbjct: 613 EFLRENYR-----IRENDFLSFDAMRHAAQCLGRVIRGKDDYGVMVLADRRFQ--KRRTQ 665
Query: 712 ISKWLRKSIKQYD---SFDASLEGLKSFFR 738
+ KW+ +++ + + S D ++ KSF +
Sbjct: 666 LPKWISQAMLESETNLSTDMAVATAKSFLK 695
>gi|159152198|gb|ABW92607.1| CG4078-PA [Drosophila melanogaster]
Length = 234
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 104/179 (58%), Gaps = 10/179 (5%)
Query: 143 TPTIFYASRTHSQISQVISEYKKTAY-RVPMAVLASRKHYCTNKYV-RDKENIDEE--CK 198
P + YASRTHSQ++Q + E K+TAY + VL SR C + V R++ N ++ CK
Sbjct: 36 VPKVIYASRTHSQLTQAMRELKRTAYANMRSVVLGSRDQLCIHPEVMREQGNSNKTNMCK 95
Query: 199 LLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADD 258
L + + C V + HP L+ + DIEDLV VGQ ++ C Y+A+R +
Sbjct: 96 LRVHSKT--CSFQMRVESRKDHPDLRGP---TIMDIEDLVKVGQRLKICPYFASRELVPQ 150
Query: 259 AQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDI-DEDVLLKLQ 316
A + F PY+Y+++P R A ++++ I+ILDEAHNIE I ++ SV I DV + ++
Sbjct: 151 ADITFMPYNYLLDPKARKANKIELGNTIVILDEAHNIEKICEESASVQIKSSDVAMAIE 209
>gi|395324700|gb|EJF57135.1| DNA repair helicase [Dichomitus squalens LYAD-421 SS1]
Length = 879
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 139/327 (42%), Gaps = 66/327 (20%)
Query: 463 LNPAVVFKDVAELSLSIILTSGTLSPM----NSFSSELGVQFGTCLEAPHVIDV-DLQVL 517
LNPA F++V + + S++L GT+SPM N S L + T H+I +LQ L
Sbjct: 572 LNPATHFQEVVDAARSVVLAGGTMSPMSDVVNQLFSSLPSERLTTFSCGHIIPTSNLQTL 631
Query: 518 TSVISTGPDNYPLNASYKT----------------------------ADGYKLMEKLCNR 549
V+ GP L ++ Y + + R
Sbjct: 632 --VLKKGPRGGELTFKFQQRGDDSLIAELGQILLNFTNVVPGGMVVFVPSYGFLNVITER 689
Query: 550 WRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNND 609
W+ +G +L+AKK +F EP+ Q E VL+ Y I S+ + V + +
Sbjct: 690 WKASGMLEKLSAKKKVFSEPQESKQ--VEAVLRDYAAEIKDSSRRGALLFAVVGAKLSEG 747
Query: 610 LNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLS--- 666
LN + + R I+VG+PF N+ + L+++ N R + L+
Sbjct: 748 LNFTDD-------------LARAVIIVGLPFANLGSPE--LRERMNYVTRLEQRQLASGA 792
Query: 667 -----------GNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKW 715
G E Y N A+NQ+IGR IRHR D+ A++L+D R+ R R + KW
Sbjct: 793 RKAKTSSTKDAGTELYENMCMNAVNQSIGRAIRHRGDWAALVLVDCRYASPRIRGKLPKW 852
Query: 716 LRKSIKQYDSFDASLEGLKSFFRDVKG 742
L +SF +++ L F+R+ K
Sbjct: 853 LEAGTVVTESFGQAMKELGRFYREKKA 879
Score = 107 bits (267), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 160/379 (42%), Gaps = 115/379 (30%)
Query: 27 FPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQN----- 81
FP++PY QL M V S ++ + A++ESPTGTGK+LSLLC++L W Q+
Sbjct: 14 FPFKPYDIQLDLMRHVFSAIEDKK-----VAIMESPTGTGKTLSLLCASLTWLQHERERA 68
Query: 82 --------------------------------------------CKLKNQLANISHS--- 94
K + QL ++H
Sbjct: 69 RTGQLESEGGGSHGTDWVLAQTIERRRRQLEAEDLEYAKRLEAARKREAQLRKLAHGHVR 128
Query: 95 -----KPDTEAVTDPLANGGGFIPESQ-----PSTIPPSTNG--QTAQVAMNNKNVKKKM 142
P+ EA D + F+P+ Q S I P+ + Q +++ + +K+
Sbjct: 129 KKPRLSPEVEAPPDDAEDDTVFLPDYQDGGGEQSNISPAVLALMRKLQGPISSPDFEKEP 188
Query: 143 TPT-IFYASRTHSQISQVISEYKKTAYRVPMAV--------------------------- 174
+ T I+YASRTHSQ++QV+ E +K ++ +AV
Sbjct: 189 SCTKIYYASRTHSQLAQVLHELEKLNIKLNIAVPSAPSLPSVRRPLDTSRAEKRSVESLE 248
Query: 175 ----------------LASRKHYCTNKYVRDKE-NIDEECKLLLGDRNLG-CPQFKNVHK 216
L SRK C N+ ++++ ++DE C+ +LG++ CP +V +
Sbjct: 249 NENEDSTMGTGPRAVSLGSRKQLCINERLKERAGDLDEACRQMLGEKGKKRCPHLPSVEE 308
Query: 217 VRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRG 276
L+ DIEDL +GQ C Y+ +R AQLV PY+ ++ R
Sbjct: 309 EARMLDLRDQILATPKDIEDLYQIGQAADTCPYFGSRRAIPKAQLVLLPYNLLLQKTARE 368
Query: 277 AMEVDIKGAILILDEAHNI 295
A+ +D+ ++I+DEAHN+
Sbjct: 369 ALGIDLTDQVVIIDEAHNL 387
>gi|46116906|ref|XP_384471.1| hypothetical protein FG04295.1 [Gibberella zeae PH-1]
Length = 761
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 179/795 (22%), Positives = 310/795 (38%), Gaps = 203/795 (25%)
Query: 43 ISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCKLKNQLANISHSKPDTEAVT 102
+ TLD GHC +LE P+GTGK++SLL +A+QQ
Sbjct: 1 MQTLDAG---GHC--VLEMPSGTGKTVSLLSLIVAYQQ---------------------- 33
Query: 103 DPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKKMTPTIFYASRTHSQISQVISE 162
++PE K+K+ Y SRT S+I + + E
Sbjct: 34 --------YMPE------------------------KRKL----IYCSRTMSEIEKALVE 57
Query: 163 YKK-TAYRVPMAV---------LASRKHYCTNKYVRDKEN---IDEECKLLL-------- 201
K YR L SRK+ C + V+ +++ +D C+ L
Sbjct: 58 LKSLMKYRAEELGYEEEFRGLGLTSRKNLCLHPSVKREKSGAIVDARCRSLTAGFVKEKK 117
Query: 202 --GDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDA 259
G+ C N+ + H + G V +D++ G+ + C Y+ AR M
Sbjct: 118 ERGENVDVCVYHDNLDLLEPHNLIPNG----VWSFDDIIRYGEEQKQCPYFTARRMMQYC 173
Query: 260 QLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLK---- 314
+V Y Y+++P I + D K I++ DEAHNI+++ ++ S DI ED L K
Sbjct: 174 NVVIFSYHYLLDPKIAERVSKDFSKDCIVVFDEAHNIDNVCIESLSTDITEDSLRKATRG 233
Query: 315 ---LQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRE 371
L+ ++ Q+ + + L Q LV + R A A++E + + L+E
Sbjct: 234 AQNLENKISQMRDTDQ---EQLQNEYQKLVQGL--RDADEARQEDAFMANPALPEDLLKE 288
Query: 372 LQEANISR--------QCFPILLECATKAIKEATDTE-SELPHLSGMSVITLEGL----- 417
NI R + F L+ K + ++T S L HL + I + L
Sbjct: 289 AVPGNIRRAEHFIAFLKRFIEYLKTRMKVRQVISETPPSFLAHLREHTFIEKKPLRFCAE 348
Query: 418 -FSSLTYFFSRNGSHVSDYQ--------------------LALQKYIKRDSKNPGGNWTH 456
+SL + +++ DYQ L L+ + ++ P
Sbjct: 349 RLTSLVR--TLELTNIEDYQPLQEVATFATLVATYEKGFLLILEPFESDTAEVPNP---- 402
Query: 457 TLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQV 516
L CL+ A+ K V + S+I+TSGT+SP+ + L F T ++ + + + +
Sbjct: 403 VLHFTCLDAAIAIKPVFDRFYSVIITSGTISPLEIYPKML--DFQTVIQESYAMTLARRS 460
Query: 517 LTSVIST-GPDNYPLNASYK---------------------TADG-------YKLMEKLC 547
+I T G D ++ S++ T DG Y ME +
Sbjct: 461 FMPMIVTRGSDQASVSTSFQVRNEPSVVRNYGNLLTEFAKITPDGMVVFFPSYLYMESII 520
Query: 548 NRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGN 607
+ W+ G + K + VE + + L+ Y + G ++ R K
Sbjct: 521 SMWQGMGVLDEVWKYKLILVETPDAQETS--LALETYRTACCNGRGAVLLCVARGKVSEG 578
Query: 608 NDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKY-NDTYRSSKNLLS 666
D + ++ G R + +G+PF + + ++ +TYR +
Sbjct: 579 IDFD--------HQYG-------RTVLCIGVPFQYTESRILKARLQFLRETYR-----IK 618
Query: 667 GNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYD-- 724
N++ A R Q +GR +R + DYG ++L D RFQ + R + KW+ + +++ D
Sbjct: 619 ENDFLSFDAMRHAAQCLGRVLRGKDDYGIMVLADRRFQ--KKRTQLPKWINQGLQESDVN 676
Query: 725 -SFDASLEGLKSFFR 738
S D ++ + F R
Sbjct: 677 LSTDMAVSSARRFLR 691
>gi|224001022|ref|XP_002290183.1| nucleotide excision repair protein ERCC2 [Thalassiosira pseudonana
CCMP1335]
gi|220973605|gb|EED91935.1| nucleotide excision repair protein ERCC2 [Thalassiosira pseudonana
CCMP1335]
Length = 770
Score = 115 bits (288), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 195/873 (22%), Positives = 333/873 (38%), Gaps = 239/873 (27%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+++ G+ V FPY + Y Q +M + TLD GHC LLE PTGTGK++ LL
Sbjct: 3 FNLEGLDVFFPYDRIYLEQYQYMRALKQTLDAG---GHC--LLEMPTGTGKTVCLLSLIT 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNK 136
++ QLAN N G + ++ T+P MN+
Sbjct: 58 SY--------QLAN---------------PNCGKLVYCTR--TVP----------EMNS- 81
Query: 137 NVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYV---RDKENI 193
V +++ + Y S S V++ L+SR++ C ++ V D+E I
Sbjct: 82 -VMEELGTVLAYRSEQLGAGSGVLA-----------LCLSSRRNMCIHERVLRESDREGI 129
Query: 194 DEECKLLLGDRNLGCP-QFKNVHKVRGHPSLQKGGCHE-----------------VHDIE 235
D C R++ P + K R S Q E V+D+E
Sbjct: 130 DAAC------RSMTAPWAIEKAQKARQQQSAQVVETCEYYDGFQSAGEATSMPSGVYDLE 183
Query: 236 DLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKG-AILILDEAHN 294
+L G+ C YY R + A ++ Y Y+++P + + +++ +I++ DEAHN
Sbjct: 184 ELRKWGKNKNWCPYYLTRQAINHASVLVFNYQYMLDPKVAKMVSKELESESIIVFDEAHN 243
Query: 295 IEDIARDAGSVDIDEDVL----------------------LKLQMELEQVCSVNPMIYQP 332
I+ + +A SVDI E L +LQ E + + VN ++ Q
Sbjct: 244 IDSVCIEALSVDIHERNLEQATRSLGRLSSEVSRIKASDGARLQAEYQNL--VNGLVDQG 301
Query: 333 LIEMTQDLVGW-----------------IERRKATLA--KREFQHF---FSCWTGDKA-- 368
L++ VG I R + +A K+ +H +G +
Sbjct: 302 LLDAPAAAVGLSSNVLSPDVINEAVPGNIRRAEHFIAFMKKIVEHLKTRLRAVSGPRGGV 361
Query: 369 LRELQEANISRQCFPILLECATKAIKEATDTESEL------PHLSGMSVITLEGLFSSLT 422
+ E A + R LE K +K A S L P+L + +T F+SL
Sbjct: 362 ISETPLAFLHRMITTTSLE--AKPLKFAYSRLSSLLRTLQVPNLDDFNALTDVADFASL- 418
Query: 423 YFFSRNGSHVSDYQLALQKY---IKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSI 479
V+ Y L ++ ++ + + G + L CL+ ++ + + S+
Sbjct: 419 ---------VATYAEGLPRFAIIMEPNGSSIPGALDPVIQLACLDASLAIAPLFKRFGSV 469
Query: 480 ILTSGTLSPMNSFSSELGVQFGTCL-EAPHVIDVDLQVLTSVISTGPDNYPLNASYKTAD 538
++TSGTLSP++ + L QF C+ E+ ++ + VI+ G D P++ + D
Sbjct: 470 VITSGTLSPIDLYPKLL--QFEPCVSESFNMSTFRPCIRPLVITRGSDQLPVSTKFDDRD 527
Query: 539 ----------------------------GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPK 570
Y ME + + W G +L K +F+E K
Sbjct: 528 DMGVVRNYGSMLVELCSSIPDGVVAFFTSYSYMESIISEWDGMGILRQLTKSKLVFIETK 587
Query: 571 GGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVC 630
+ + L +Y + G +GA FL+V
Sbjct: 588 DVVET--TLALDNYRRACDSG------------------------------RGAVFLSVA 615
Query: 631 RGK---------------IVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQA 675
RGK I+ G+PF + + +Y T+ + ++ A
Sbjct: 616 RGKVSEGINFDRHYGRAVIMFGVPFQYTLSHILRARLEYLQTHYQIRE----QDFLNFDA 671
Query: 676 FRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYD---SFDASLEG 732
R +Q +GR IR + DYG +I D R+ R+ + KW+ + + S D ++
Sbjct: 672 LRQASQCVGRVIRSKIDYGLMIFADSRYNRHDKRSKLPKWILQFLGDGQLNLSTDTAIAQ 731
Query: 733 LKSFFRDVKGWVGKKMFNGLENSDNDVDHVSSM 765
+K F R + V + N L+ +D V +M
Sbjct: 732 VKHFLRVMAQPVDQ---NALKEVLLTLDEVQAM 761
>gi|45201210|ref|NP_986780.1| AGR114Cp [Ashbya gossypii ATCC 10895]
gi|44986064|gb|AAS54604.1| AGR114Cp [Ashbya gossypii ATCC 10895]
gi|374110029|gb|AEY98934.1| FAGR114Cp [Ashbya gossypii FDAG1]
Length = 774
Score = 115 bits (288), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 178/806 (22%), Positives = 320/806 (39%), Gaps = 171/806 (21%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+ + + V FPY + Y Q +MC + TLD +++LE P+GTGK++SLL T+
Sbjct: 3 FFIDDLPVIFPYPKIYPEQYQYMCDIKKTLD-----AGGNSILEMPSGTGKTVSLLALTV 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNK 136
A+Q + K ++ S + + E L + + + G T++ K
Sbjct: 58 AYQMHYKEHRKIIYCSRTMSEIEKALVELESLMDYRAKELQYQEEFRGLGLTSR-----K 112
Query: 137 NVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE 196
N+ H ++S+ E K T V+ + TN R ++ D E
Sbjct: 113 NLC------------LHPRVSK---ERKGT-------VVDEKCRRMTNGQARARKQQDPE 150
Query: 197 CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMA 256
+ L C +N++ L G V+ E L+ + C Y+ R M
Sbjct: 151 ANVEL------CNYHENMYNYSPEEYLPLG----VYSFEKLIRYCEDKTLCPYFTVRRMI 200
Query: 257 DDAQLVFCPYSYIINPVI--RGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLK 314
++ Y Y+++P I R + EV K AI+I DEAHNI+++ ++ S+D+ +D+L +
Sbjct: 201 SMCNIIIYSYHYLLDPKIEERVSREVS-KDAIVIFDEAHNIDNVCIESLSLDLTKDLLKR 259
Query: 315 -------LQMELEQVCSVN--------------------------PMIYQPLI--EMTQD 339
L ++E+V V+ P++ P++ ++ +D
Sbjct: 260 ASKGASVLGKKVEEVRRVDTKKLQDEYDKLVQGLRANDIMEENEEPLVESPVLPADILKD 319
Query: 340 LV-GWIERRKATLA--KREFQHFFSCWTGDKALRELQEA-NISRQCFPILLECATKAIKE 395
V G I R + +A KR ++ T K L + E N Q L K ++
Sbjct: 320 AVPGNIRRAEHFVAFLKRFIEYL---KTRMKVLHVISETPNSFLQHLKQLTFIDRKPLRY 376
Query: 396 ATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWT 455
+ S L + + + F + ++ S + L ++ Y ++ P
Sbjct: 377 CAERLSLLARTLEIDEVEEFNALKDIATFATLISTYESGFLLIIEPYEIENAAVPNPIMR 436
Query: 456 HTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQ 515
T CL+ ++ K V E S+I+TSGT+SP++ + L F T L+ + + + +
Sbjct: 437 FT----CLDASIAIKPVFEKFSSVIITSGTISPLDMYPRMLN--FETVLQKSYSMTLAQK 490
Query: 516 -VLTSVISTGPDNYPLNASYK---------------------TADG-------YKLMEKL 546
L +I+ G D +++ ++ T DG Y ME +
Sbjct: 491 SFLPMIITKGSDQVAISSRFEIRNDPSIVRNYGSILVEFAKITPDGMVVFFPSYLYMESI 550
Query: 547 CNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREG 606
+ W+ G + K + VE + + L+ Y + S G
Sbjct: 551 ISTWQTMGILDEVWKYKLILVETPDAQETS--LALETYRKACSNG--------------- 593
Query: 607 NNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPN---INDIQVSLKKKYNDTYRSSKN 663
+GA L+V RGKI GI F + + + + +Y ++
Sbjct: 594 ---------------RGAILLSVARGKISEGIDFDHHYGRTVLMIGIPFQYTESRILKAR 638
Query: 664 L--------LSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKW 715
L + N++ A R Q +GR +R + DYG ++L D RF ++N + KW
Sbjct: 639 LEFLRENYQIRENDFLSFDAMRHAAQCLGRVLRGKDDYGVMVLADRRFSRKKN--QLPKW 696
Query: 716 LRKSIKQYD---SFDASLEGLKSFFR 738
+ + + D S D ++ K F R
Sbjct: 697 IAQGLSDADLNLSTDMAIANTKQFLR 722
>gi|254578942|ref|XP_002495457.1| ZYRO0B11836p [Zygosaccharomyces rouxii]
gi|238938347|emb|CAR26524.1| ZYRO0B11836p [Zygosaccharomyces rouxii]
Length = 770
Score = 115 bits (288), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 179/806 (22%), Positives = 318/806 (39%), Gaps = 171/806 (21%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+ + + V FPY + Y Q +MC + TLD +++LE P+GTGK++SLL T+
Sbjct: 3 FFIDDLPVLFPYPKIYPEQYHYMCDLKRTLDSGG-----NSILEMPSGTGKTVSLLSLTI 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNK 136
A+Q + ++ S + + E L N + + G T++ K
Sbjct: 58 AYQMHYPEHRKIIYCSRTMSEIEKALVELENLMDYRTKELGYREDFRGLGLTSR-----K 112
Query: 137 NVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE 196
N+ H Q+S+ E T ++ + TN + K+ D +
Sbjct: 113 NLC------------LHPQVSK---ERNGT-------LVDEKCRRMTNGQAKHKQEADPD 150
Query: 197 CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMA 256
K+ L C +N++ + L KG V E L+ + C Y+ R M
Sbjct: 151 AKVEL------CDYHENLYNYQVEDYLPKG----VFSFEKLIRYCEERTLCPYFIVRRMI 200
Query: 257 DDAQLVFCPYSYIINPVI--RGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLK 314
++ Y Y+++P I R + EV K I+I DEAHNI+++ ++ S+D+ DVL +
Sbjct: 201 SLCNIIIYSYHYLLDPKIAERVSNEVS-KDGIVIFDEAHNIDNVCIESLSLDLTNDVLKR 259
Query: 315 -------LQMELEQVCSVNPMIYQ---------------------PLIE---MTQDLV-- 341
L+ +++V V+ Q P +E ++QDL+
Sbjct: 260 ATKGAYALENRIDEVRQVDARRLQDEYDKLVQDLHAADILDQEEEPAVETPVLSQDLITE 319
Query: 342 ---GWIERRK--ATLAKREFQHFFSCWTGDKALRELQEANIS-RQCFPILLECATKAIKE 395
G I R + + KR ++ T K L + E S Q L K ++
Sbjct: 320 AMPGNIRRAEHFVSFLKRLIEYL---KTRMKVLHVISETPKSFLQHLKQLTFIDRKPLRF 376
Query: 396 ATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWT 455
+ S L ++ I + F + ++ S + L ++ Y ++ P
Sbjct: 377 CAERLSLLVRTLEVTEIEDFTALKDIATFATLISTYESGFLLIIEPYEIENAAVPNPIMR 436
Query: 456 HTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQ 515
T CL+ ++ K V E S+I+TSGT+SP++ + L F T L+ + + + +
Sbjct: 437 FT----CLDASIAIKPVFERFSSVIITSGTISPLDMYPRMLN--FDTVLQKSYAMTLAKK 490
Query: 516 -VLTSVISTGPDNYPLNASYK---------------------TADG-------YKLMEKL 546
L +++ G D +++ ++ T DG Y ME +
Sbjct: 491 SFLPMIVTKGSDQVAISSRFEIRNDPSIVRNYGSMLVEFAKITPDGMVVFFPSYLYMESI 550
Query: 547 CNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREG 606
+ W+ G + K + VE + + L+ Y + S G
Sbjct: 551 ISMWQTMGILDEVWKYKLILVETPDAQETS--LALETYRKACSNG--------------- 593
Query: 607 NNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPN---INDIQVSLKKKYNDTYRSSKN 663
+GA L+V RGK+ GI F + + + + +Y ++
Sbjct: 594 ---------------RGAIILSVARGKVSEGIDFDHHYGRTVLMIGIPFQYTESRILKAR 638
Query: 664 L--------LSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKW 715
L + N++ A R Q +GR +R + DYG +IL D RF +RN+ + KW
Sbjct: 639 LEFLRENYQIRENDFLSFDAMRHAAQCLGRVLRGKDDYGVMILADRRFSRKRNQ--LPKW 696
Query: 716 LRKSIKQYD---SFDASLEGLKSFFR 738
+ + + D S D ++ K F R
Sbjct: 697 ISQGLSDADLNLSTDMAIANAKQFLR 722
>gi|444320679|ref|XP_004180996.1| hypothetical protein TBLA_0E04230 [Tetrapisispora blattae CBS 6284]
gi|387514039|emb|CCH61477.1| hypothetical protein TBLA_0E04230 [Tetrapisispora blattae CBS 6284]
Length = 779
Score = 115 bits (287), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 182/807 (22%), Positives = 321/807 (39%), Gaps = 173/807 (21%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+ + + V FPY + Y Q +MC + TLD +++LE P+GTGK++SLL T+
Sbjct: 3 FFIDDLPVLFPYPKIYPEQYQYMCDIKKTLDVGG-----NSILEMPSGTGKTVSLLSLTI 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNK 136
A+Q + ++ S + + E L N + + G T++ K
Sbjct: 58 AYQMHYPEHRKIIYCSRTMSEIEKALVELENLMDYREKELGVKEEFRGLGLTSR-----K 112
Query: 137 NVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTN-KYVRDKENIDE 195
N+ H QIS+ E K T V+ + TN + R EN D
Sbjct: 113 NLC------------LHPQISK---EKKGT-------VVDEKCRRLTNGQNKRILEN-DP 149
Query: 196 ECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSM 255
+ K+ L C +N++K+ L G V E L+ + C Y+ R M
Sbjct: 150 DAKVEL------CDYHENLYKLDVENYLPNG----VFSFEKLIRYCEERTLCPYFIVRRM 199
Query: 256 ADDAQLVFCPYSYIINPVI--RGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLL 313
++ Y Y+++P I R + EV K +I+I DEAHNI+++ ++ S+D+ DVL
Sbjct: 200 ISMCNIIIYSYHYLLDPKIAERVSKEVS-KDSIVIFDEAHNIDNVCIESLSLDLTNDVLR 258
Query: 314 K-------LQMELEQVCSVN--------------------------PMIYQPLIE---MT 337
K L ++E+V ++ P++ P++ +T
Sbjct: 259 KASKGATTLAEKIEEVREIDSSKLQDEYEKLVKGLHASDILNAEEEPVVETPVLSEDLLT 318
Query: 338 QDLVGWIERRKATLA--KREFQHFFSCWTGDKALRELQEANIS-RQCFPILLECATKAIK 394
+ + G I R + +A KR ++ T K L + E S Q L K ++
Sbjct: 319 EAIPGNIRRAEHFVAFLKRLIEYL---KTRMKVLHVISETPKSFLQHLKQLTFIDRKPLR 375
Query: 395 EATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNW 454
++ S L ++ I + F + ++ + L ++ Y ++ P
Sbjct: 376 FCSERLSLLVRTLEVTEIEDFNALKDIATFATLISTYEEGFLLIIEPYEIENAAVPNPIM 435
Query: 455 THTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDL 514
T CL+ ++ K V E S+I+TSGT+SP++ + L F T L+ + + +
Sbjct: 436 RFT----CLDASIAIKPVFERFSSVIITSGTISPLDMYPRMLN--FTTTLQKSYSMTLTK 489
Query: 515 Q-VLTSVISTGPDNYPLNASYK---------------------TADG-------YKLMEK 545
+ L +I+ G D +++ ++ T DG Y ME
Sbjct: 490 KSFLPMIITKGSDQVAISSRFEIRSDPSIVRNYGSMLVEFAKITPDGMVVFFPSYLYMES 549
Query: 546 LCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKRE 605
+ + W+ G + K + VE + + L+ Y + S G
Sbjct: 550 IISMWQTMGILDEVWKHKLILVETPDAQETS--LALETYRKACSNG-------------- 593
Query: 606 GNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPN---INDIQVSLKKKYNDTYRSSK 662
+GA L+V RGK+ GI F + + + + +Y ++
Sbjct: 594 ----------------RGAILLSVARGKVSEGIDFDHHYGRTVLMIGIPFQYTESRILKA 637
Query: 663 NL--------LSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISK 714
L + N++ A R Q +GR +R + DYG ++L D RF RN+ + K
Sbjct: 638 RLEFLRENYQIRENDFLSFDAMRHAAQCLGRVLRGKDDYGVMVLADRRFSRRRNQ--LPK 695
Query: 715 WLRKSIKQYD---SFDASLEGLKSFFR 738
W+ + + D S D ++ K F R
Sbjct: 696 WISQGLSDADLNLSTDMAIANTKQFLR 722
>gi|365760988|gb|EHN02666.1| Rad3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 775
Score = 115 bits (287), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 173/794 (21%), Positives = 314/794 (39%), Gaps = 147/794 (18%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+++ + V FPY + Y Q +MC + TLD +++LE P+GTGK++SLL T+
Sbjct: 3 FYIDDLPVLFPYPKIYPEQYKYMCDIKRTLDVGG-----NSILEMPSGTGKTVSLLSLTI 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNK 136
A+Q + ++ S + + E L N + +T ++
Sbjct: 58 AYQMHYPEHRKIIYCSRTMSEIEKALVELENLMDY---------------RTKELGYQED 102
Query: 137 NVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE 196
+T SR + + +S+ +K V+ + TN + K D E
Sbjct: 103 FRGLGLT------SRKNLCLHPEVSKERKG------TVVDEKCRRMTNGQAKRKLEEDPE 150
Query: 197 CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMA 256
+ L C +N++ + L KG V E L+ + C Y+ R M
Sbjct: 151 ANVEL------CEYHENLYDIEVEDYLPKG----VFSFEKLLKYCEEKTLCPYFIVRRMI 200
Query: 257 DDAQLVFCPYSYIINPVI--RGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLK 314
++ Y Y+++P I R + EV K +I+I DEAHNI+++ ++ S+D+ D L +
Sbjct: 201 SLCNIIIYSYHYLLDPKIAERVSNEVS-KDSIVIFDEAHNIDNVCIESLSLDLTTDALRR 259
Query: 315 LQMEL----EQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALR 370
E++ V + Q L + + LV + L +E + L+
Sbjct: 260 ATRGANALDERITEVRKVDSQKLQDEYEKLVQGL-HSADILTDQEEPFVETPVLPLDLLK 318
Query: 371 ELQEANISRQCFPI--------LLECATKAIKEATDT-ESELPHLSGMSVI--------- 412
E NI R + L+ K + ++T +S L HL ++ I
Sbjct: 319 EAIPGNIRRAEHFVSFLKRLIEYLKTRMKVLHVISETPKSFLQHLKQLTFIERKPLRFCS 378
Query: 413 --------TLE-------GLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHT 457
TLE + F + ++ + L ++ Y ++ P T
Sbjct: 379 ERLSLLVRTLEVAEVEDFNALKDIATFATLISTYEEGFLLIIEPYEIENAAVPNPIMRFT 438
Query: 458 LSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQ-V 516
CL+ ++ K V E S+I+TSGT+SP++ + L F T L+ + + + +
Sbjct: 439 ----CLDASIAIKPVFEKFSSVIITSGTISPLDMYPRMLN--FKTVLQKSYAMTLAKKSF 492
Query: 517 LTSVISTGPDNYPLNASYK---------------------TADG-------YKLMEKLCN 548
L +I+ G D +++ ++ T DG Y ME + +
Sbjct: 493 LPMIITKGSDQVAISSRFEIRNDPSIVRNYGSMLVEFAKITPDGMVVFFPSYLYMESIVS 552
Query: 549 RWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNN 608
W+ G + K + VE + + L+ Y + S G ++ R K
Sbjct: 553 MWQTMGILDEVWKHKLILVETPDAQETS--LALETYRKACSNGRGAILLSVARGKVSEGI 610
Query: 609 DLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKY-NDTYRSSKNLLSG 667
D + ++ G R +++GIPF + + ++ + YR +
Sbjct: 611 DFD--------HQYG-------RTVLMIGIPFQYTESRILKARLEFMRENYR-----IRE 650
Query: 668 NEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYD--- 724
N++ A R Q +GR +R + DYG ++L D RF R R+ + KW+ + + D
Sbjct: 651 NDFLSFDAMRHAAQCLGRVLRGKDDYGVMVLADRRFS--RKRSQLPKWIAQGLSDADLNL 708
Query: 725 SFDASLEGLKSFFR 738
S D ++ K F R
Sbjct: 709 STDMAISSTKQFLR 722
>gi|164662899|ref|XP_001732571.1| hypothetical protein MGL_0346 [Malassezia globosa CBS 7966]
gi|159106474|gb|EDP45357.1| hypothetical protein MGL_0346 [Malassezia globosa CBS 7966]
Length = 837
Score = 115 bits (287), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 163/789 (20%), Positives = 309/789 (39%), Gaps = 154/789 (19%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+++ + V FPY + Y Q +M + TLD H +LE P+GTGK++SLL +
Sbjct: 3 FYIDDLPVLFPYPKIYPEQYSYMVDLKRTLD-----VKGHGVLEMPSGTGKTVSLLSLII 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNK 136
++Q+ +L S + + E L + + K
Sbjct: 58 SYQRFYPGSRKLVYCSRTVSEIEKALAELKRLMAYRAKYN-----------------TKK 100
Query: 137 NVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYV---RDKENI 193
+ + P + Q+ +++ L+SRK+ C + V R + +
Sbjct: 101 QLSDGIEPMDVDSEDIQGQMEDILA-----------LGLSSRKNMCVHPTVSQERKGKVV 149
Query: 194 DEECKLLL-------GDRNLGCPQFKNVHKVRGHPSLQKGGCHE--VHDIEDLVNVGQVV 244
D C+ + G ++ G + + H+ G L+ G V IE+L+ +
Sbjct: 150 DARCRDMTSAWACEKGRQDPGSVELCDFHEELG--KLEPGHLVPPGVWTIEELIEYSKDK 207
Query: 245 RGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAG 303
C Y+A R M ++ + Y+++P + + +I K AI++ DEAHNI+++ ++
Sbjct: 208 GICPYFAVRRMMPFCDIIIYSFHYLLDPKVAEQVSKEISKDAIVVFDEAHNIDNVCIESL 267
Query: 304 SVDIDEDVLL-------KLQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREF 356
S+D+ +L +L ++++V V+ + + V +E + RE
Sbjct: 268 SIDLTRPILDNAYRCVNQLADKVDEVKKVDSA------RLQDEYVRLVEGLQQQSDDREA 321
Query: 357 QHFFS-CWTGDKALRELQEANISR-QCFPILLECATKAIKE--------ATDTESELPHL 406
+ F + D L+E NI R + F L + +K A S L HL
Sbjct: 322 ESFMANPVLPDDLLQEAIPGNIRRAEHFVAFLRRFVEYLKTRMRVLHVVAETPASFLQHL 381
Query: 407 SGMSVI-----------------TLE-------GLFSSLTYFFSRNGSHVSDYQLALQKY 442
++ I TLE ++ +F + ++ + L L+ +
Sbjct: 382 KEITFIERKPLRFCAERLRMLVQTLELTRLDEYSALQTVAFFATLVSTYDKGFLLILEPF 441
Query: 443 IKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGT 502
+ P + T CL+ ++ V E S+I+TSGT+SP++ + L +F T
Sbjct: 442 ETEQATVPNPIFHFT----CLDASLAIAPVFERFSSVIITSGTISPLDMYPKML--RFDT 495
Query: 503 CLEAPHVIDVDLQ-VLTSVISTGPDNYPLNASYKT---------------------ADG- 539
++ + + + Q L VI+ G D +++ ++ DG
Sbjct: 496 VVQESYTMTLTRQCFLPLVITRGSDQVAISSRFEVRNDPSVVRNYGNILIEYSRCIPDGI 555
Query: 540 ------YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSK 593
Y ME + W + G + K +F+E + I L++Y + G
Sbjct: 556 VAFFPSYLYMESIVAAWHDMGILDEVWRHKLVFIETPDAPET--SIALENYRRACDNGRG 613
Query: 594 CAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKK 653
++ R K D + + G R I+ G+P+ + + +
Sbjct: 614 AILLSVARGKVSEGIDFD--------HNYG-------RAVIMFGVPYQYTESRILKARLE 658
Query: 654 Y-NDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHI 712
+ D +R + N++ A R Q +GR +R + DYG +I D+RF RA +
Sbjct: 659 FLRDNFR-----IKENDFLTFDAMRHAAQCVGRVLRGKSDYGLMIFADKRFARSDKRAKL 713
Query: 713 SKWLRKSIK 721
KW+ + I+
Sbjct: 714 PKWIAQYIE 722
>gi|5044|emb|CAA45870.1| rhp3+ [Schizosaccharomyces pombe]
Length = 772
Score = 115 bits (287), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 176/807 (21%), Positives = 314/807 (38%), Gaps = 174/807 (21%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+++ + + FPY + Y Q +MC + +LD ALLE P+GTGK++SLL +
Sbjct: 3 FYIDDLPILFPYPRIYPEQYQYMCDLKHSLDAGGI-----ALLEMPSGTGKTISLLSLIV 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNK 136
++QQ+ +L S + + + L + +T+Q+
Sbjct: 58 SYQQHYPEHRKLIYCSRTMSEIDKALAELKRLMAY---------------RTSQLGYEEP 102
Query: 137 NVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKEN---I 193
+ +T SRK+ C + VR ++N +
Sbjct: 103 FLGLGLT---------------------------------SRKNLCLHPSVRREKNGNVV 129
Query: 194 DEECKLLLG-----DRNLG-----CPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQV 243
D C+ L R G C N+ + H + G V ++D+ G+
Sbjct: 130 DARCRSLTAGFVREQRLAGMDVPTCEFHDNLEDLEPHSLISNG----VWTLDDITEYGEK 185
Query: 244 VRGCSYYAARSMADDAQLVFCPYSYIINPVI--RGAMEVDIKGAILILDEAHNIEDIARD 301
C Y+ R M ++ Y Y+++P I R + E++ K I++ DEAHNI+++ +
Sbjct: 186 TTRCPYFTVRRMLPFCNVIIYSYHYLLDPKIAERVSRELN-KDCIVVFDEAHNIDNVCIE 244
Query: 302 AGSVDIDEDVLLKLQ---MELEQ-VCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQ 357
+ S+D+ E L K + LEQ V V + L + Q LV ++ A A E Q
Sbjct: 245 SLSIDLTESSLRKASKSILSLEQKVNEVKQSDSKKLQDEYQKLVRGLQ--DANAANDEDQ 302
Query: 358 HFFSCWTGDKALRELQEANISR--------QCFPILLECATKAIKEATDT-ESELPHLSG 408
+ + L+E NI R + F L+ K + +T S L H+
Sbjct: 303 FMANPVLPEDVLKEAVPGNIRRAEHFIAFLKRFVEYLKTRMKVLHVIAETPTSFLQHVKD 362
Query: 409 MSVITLEGL---------------------FSSL---TYFFSRNGSHVSDYQLALQKYIK 444
++ I + L F SL F + ++ + L L+ +
Sbjct: 363 ITFIDKKPLRFCAERLTSLVRALQISLVEDFHSLQQVVAFATLVATYERGFILILEPFET 422
Query: 445 RDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCL 504
++ P L CL+ ++ K V E S+I+TSGTLSP++ + L QF T +
Sbjct: 423 ENATVPNP----ILRFSCLDASIAIKPVFERFRSVIITSGTLSPLDMYPKML--QFNTVM 476
Query: 505 EAPHVIDVDLQ-VLTSVISTGPDNYPLNASYK---------------------TADG--- 539
+ + + + L V++ G D +++ ++ T DG
Sbjct: 477 QESYGMSLARNCFLPMVVTRGSDQVAISSKFEARNDPSVVRNYGNILVEFSKITPDGLVA 536
Query: 540 ----YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCA 595
Y +E + + W+ G + K + VE + + L+ Y + S G
Sbjct: 537 FFPSYLYLESIVSSWQSMGILDEVWKYKLILVETPDPHET--TLALETYRAACSNGRGAV 594
Query: 596 VVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKY- 654
++ R K D + + G R I+ GIP+ + + ++
Sbjct: 595 LLSVARGKVSEGVDFD--------HHYG-------RAVIMFGIPYQYTESRVLKARLEFL 639
Query: 655 NDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISK 714
DTY+ + ++ A R Q +GR +R + D+G ++L D+R+ R + K
Sbjct: 640 RDTYQ-----IREADFLTFDAMRHAAQCLGRVLRGKDDHGIMVLADKRYGRSDKRTKLPK 694
Query: 715 WLRKSIKQYD---SFDASLEGLKSFFR 738
W+++ I + S D SL K F R
Sbjct: 695 WIQQYITEGATNLSTDMSLALAKKFLR 721
>gi|336364077|gb|EGN92441.1| hypothetical protein SERLA73DRAFT_99245 [Serpula lacrymans var.
lacrymans S7.3]
Length = 793
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 176/798 (22%), Positives = 325/798 (40%), Gaps = 144/798 (18%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+ + + + FPY + Y Q +MC + TLD GHC +LE P+GTGK++SLL +
Sbjct: 3 FFIDNLPIIFPYDRIYPEQYAYMCDLKRTLDAT---GHC--VLEMPSGTGKTVSLLSLIV 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNK 136
++QQ + +L S + P+ E L + E + S +T + +
Sbjct: 58 SYQQFYPTRRKLIYCSRTVPEIEKALAELKR----LVEYRISC------AETPEEKEKEQ 107
Query: 137 NVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE 196
N + SR + I +S+ KK V+ +R TN V +K D
Sbjct: 108 NFTG-----LGLTSRKNLCIHPEVSKEKKG------KVVDARCRDLTNTAVCEKARQDP- 155
Query: 197 CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMA 256
G ++ C +N+ ++ + G + + D++ G+ + C Y+ R M
Sbjct: 156 -----GSVDI-CDWHENLGQLEPGNLITPG----IWTLADVLQHGRDNKLCPYFTIRRMM 205
Query: 257 DDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVL--- 312
+V + Y+++P + + ++ K AI++ DEAHNI+++ ++ S+D+ +L
Sbjct: 206 PFVDVVIYSFHYLLDPKVAEQVSKELSKDAIVVFDEAHNIDNVCIESLSIDLTRPMLDSA 265
Query: 313 ----LKLQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKA 368
KL ++E++ + + Q + LV +E A+ A E + D
Sbjct: 266 ARSVTKLGEKIEEIKTTDAAKLQ---DEYAKLVEGLE-EPASEAADEDNFMSNPVLPDDL 321
Query: 369 LRELQEANISR--------QCFPILLECATKAIKEATDTE-SELPHLSGMSVI------- 412
L E NI + + F L+ + + +T S L HL ++ I
Sbjct: 322 LNEAIPGNIRKAEHFVAFLKRFVEYLKTRMRVLHVVAETPLSFLQHLKDITYIERRPLRF 381
Query: 413 ----------TLE----GLFSSL---TYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWT 455
TLE +SSL F + ++ + L L+ + ++ P +
Sbjct: 382 CAERLQSMIRTLELNRLDEYSSLQKVASFATLVATYEKGFLLILEPFETDNATVPNPIFH 441
Query: 456 HTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQ 515
T CL+P++ K V E S+++TSGT+SP++ + L QF ++ + + +
Sbjct: 442 FT----CLDPSLAIKPVFERFSSVVITSGTISPLDMYPKML--QFTPVVQETYPMTLTRN 495
Query: 516 V-LTSVISTGPDNYPLNASYK---------------------TADG-------YKLMEKL 546
L VI+ G D +++ ++ DG Y ME +
Sbjct: 496 AFLPLVITRGSDQVAISSRFEVRNDPAVVRNFGSILIEYSKIVPDGIVAFFPSYLYMESI 555
Query: 547 CNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREG 606
W + G + + K +FVE ++ I L++Y + G ++ R K
Sbjct: 556 VAAWNDMGILNEVWKNKLIFVETPDANET--SIALENYRRACDNGRGAVLLSVARGKVSE 613
Query: 607 NNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKY-NDTYRSSKNLL 665
D + + G R I+ G+P+ + + +Y D YR +
Sbjct: 614 GIDFD--------HNYG-------RAVIMFGVPYQYTESRILKARLEYLRDAYR-----I 653
Query: 666 SGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYD- 724
+E+ A R Q +GR +R + D+G ++ D+RF RA + +W+ + I +
Sbjct: 654 RESEFLGFDAMRNAAQCVGRVLRGKTDWGLMVFADKRFARADKRAKLPRWINQYITEVAS 713
Query: 725 --SFDASLEGLKSFFRDV 740
S D +L K F R +
Sbjct: 714 NLSTDMALTLSKLFMRTI 731
>gi|66827895|ref|XP_647302.1| transcription factor IIH component [Dictyostelium discoideum AX4]
gi|74859460|sp|Q55G81.1|ERCC2_DICDI RecName: Full=TFIIH basal transcription factor complex helicase
repD subunit; AltName: Full=DNA excision repair
cross-complementing protein-2 homolog; AltName: Full=DNA
repair protein D
gi|60475224|gb|EAL73159.1| transcription factor IIH component [Dictyostelium discoideum AX4]
Length = 776
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 171/780 (21%), Positives = 311/780 (39%), Gaps = 158/780 (20%)
Query: 100 AVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKKMTPTIFYASRTHSQISQV 159
A+ L NGG I E +P T + +++ + K + + Y SRT +I Q
Sbjct: 27 ALKRSLDNGGPCILE-----MPSGTGKTVSLLSLISSYQVKNPSIKLIYCSRTVPEIEQA 81
Query: 160 ISEYKKTA-YR-------VPMAV---LASRKHYCTNKYV---RDKENIDEECKLLLGDRN 205
E ++ YR P + ++SR++ C V RD + +D C+ L N
Sbjct: 82 TEEARRVLQYRNSEMGEESPKTLCMSMSSRRNLCIQPRVSEERDGKVVDALCRELTSSWN 141
Query: 206 LGCP-----QFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQ 260
P +F + G L +G V+ +EDL G + C Y+ +R M + A
Sbjct: 142 RESPTSEKCKFFENFESNGKEILLEG----VYSLEDLKEYGLKHQMCPYFLSRHMLNFAN 197
Query: 261 LVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVL------- 312
+V Y Y+++P I + +I++ DEAHNI+++ +A S++ID +L
Sbjct: 198 IVIFSYQYLLDPKIASLISSSFPSNSIVVFDEAHNIDNVCINALSINIDNKLLDTSSKNI 257
Query: 313 LKLQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRE- 371
K+ ++E + V+ + L + Q LV + R +T A T D L
Sbjct: 258 AKINKQIEDIKKVDE---KRLKDEYQRLVNGLARSGSTRADET--------TSDPVLPND 306
Query: 372 -LQEA---NISR-QCFPILLECATKAIK-----EATDTESELPHLSGMSVIT-------- 413
+QEA NI + + F LL +K + +ES L L G+ T
Sbjct: 307 VIQEAVPGNIRKAEHFISLLRRVVDYLKSRLKSQMLLSESPLAFLQGLYHATQISSRTLR 366
Query: 414 -----LEGLFSSLTY--------------FFSRNGSHVSDYQLALQKYIKRDSKNPGGNW 454
L L +L F + G++ + + + ++ Y +R + +
Sbjct: 367 FCSSRLSSLLRTLRINDVNQFSGISLIADFATLVGTYNNGFLIIIEPYYQRQN----NTY 422
Query: 455 THTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDL 514
CL+ ++ K + + S+++TSGTLSP++ ++ L + P V++
Sbjct: 423 DQIFQFCCLDASIGMKPIFDKYRSVVITSGTLSPLDIYTKMLNFR-------PTVVERLT 475
Query: 515 QVLTS------VISTGPDNYPLNASYK---------------------TADG-------Y 540
L +++ G D ++ + DG Y
Sbjct: 476 MSLNRNCICPCILTRGSDQISISTKFDVRSDTAVVRNYGALLVEVSAIVPDGIICFFTSY 535
Query: 541 KLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKK 600
ME++ + W E G + + K +FVE ++ + L++Y + G ++
Sbjct: 536 SYMEQIVSVWNEMGLLNNILTNKLIFVETSDPAES--ALALQNYKKACDSGRGAVLLSVA 593
Query: 601 RVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKY-NDTYR 659
R K D + N+ G R I+ GIP+ N + + ++ D Y+
Sbjct: 594 RGKVSEGIDFD--------NQYG-------RCVILYGIPYINTESKVLRARLEFLRDRYQ 638
Query: 660 SSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKS 719
+ NE+ A R +Q +GR IR + DYG +I D+R+ R + +W+ +
Sbjct: 639 -----IRENEFLTFDAMRTASQCVGRVIRGKSDYGIMIFADKRYNRLDKRNKLPQWILQF 693
Query: 720 IKQYD---SFDASLEGLKSFFRDVKGWVGKKMFNGLENSDNDVDHVSSMDQCKEVTKQNT 776
+ S D ++ K+F R++ ++ L S ++HV K +QN+
Sbjct: 694 CQPQHLNLSTDMAISLSKTFLREMGQPFSRE--EQLGKSLWSLEHVEKQSTSKPPQQQNS 751
>gi|2058510|gb|AAB62733.1| RepD [Dictyostelium discoideum]
Length = 776
Score = 114 bits (286), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 171/780 (21%), Positives = 310/780 (39%), Gaps = 158/780 (20%)
Query: 100 AVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKKMTPTIFYASRTHSQISQV 159
A+ L NGG I E +P T + +++ + K + + Y SRT +I Q
Sbjct: 27 ALKRSLDNGGPCILE-----MPSGTGKTVSLLSLISSYQVKNPSIKLIYCSRTVPEIEQA 81
Query: 160 ISEYKKTA-YR-------VPMAV---LASRKHYCTNKYV---RDKENIDEECKLLLGDRN 205
E ++ YR P + ++SR++ C V RD + +D C+ L N
Sbjct: 82 TEEARRVLQYRNSEMGEESPKTLCMSMSSRRNLCIQPRVSEERDGKVVDALCRELTSSWN 141
Query: 206 LGCP-----QFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQ 260
P +F + G L +G V+ +EDL G + C Y+ +R M + A
Sbjct: 142 RESPTSEKCKFFENFESNGKEILLEG----VYSLEDLKEYGLKHQMCPYFLSRHMLNFAN 197
Query: 261 LVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVL------- 312
+V Y Y+++P I + +I++ DEAHNI+++ +A S++ID +L
Sbjct: 198 IVIFSYQYLLDPKIASLISSSFPSNSIVVFDEAHNIDNVCINALSINIDNKLLDTSSKNI 257
Query: 313 LKLQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRE- 371
K+ ++E + V+ + L + Q LV + R +T A T D L
Sbjct: 258 AKINKQIEDIKKVDE---KRLKDEYQRLVNGLARSGSTRADET--------TSDPVLPND 306
Query: 372 -LQEA---NISR-QCFPILLECATKAIK-----EATDTESELPHLSGMSVIT-------- 413
+QEA NI + F LL +K + +ES L L G+ T
Sbjct: 307 VIQEAVPGNIRKPSIFISLLRRVVDYLKSRLKSQMLLSESPLAFLQGLYHATQISSRTLR 366
Query: 414 -----LEGLFSSLTY--------------FFSRNGSHVSDYQLALQKYIKRDSKNPGGNW 454
L L +L F + G++ + + + ++ Y +R + +
Sbjct: 367 FCSSRLSSLLRTLRINDVNQFSGISLIADFATLVGTYNNGFLIIIEPYYQRQN----NTY 422
Query: 455 THTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDL 514
CL+ ++ K + + S+++TSGTLSP++ ++ L + P V++
Sbjct: 423 DQIFQFCCLDASIGMKPIFDKYRSVVITSGTLSPLDIYTKMLNFR-------PTVVERLT 475
Query: 515 QVLTS------VISTGPDNYPLNASYK---------------------TADG-------Y 540
L +++ G D ++ + DG Y
Sbjct: 476 MSLNRNCICPCILTRGSDQISISTKFDVRSDTAVVRNYGALLVEVSAIVPDGIICFFTSY 535
Query: 541 KLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKK 600
ME++ + W E G + + K +FVE ++ + L++Y + G ++
Sbjct: 536 SYMEQIVSVWNEMGLLNNILTNKLIFVETSDPAES--ALALQNYKKACDSGRGAVLLSVA 593
Query: 601 RVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKY-NDTYR 659
R K D + N+ G R I+ GIP+ N + + ++ D Y+
Sbjct: 594 RGKVSEGIDFD--------NQYG-------RCVILYGIPYINTESKVLRARLEFLRDRYQ 638
Query: 660 SSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKS 719
+ NE+ A R +Q +GR IR + DYG +I D+R+ R + +W+ +
Sbjct: 639 -----IRENEFLTFDAMRTASQCVGRVIRGKSDYGIMIFADKRYNRLDKRNKLPQWILQF 693
Query: 720 IKQYD---SFDASLEGLKSFFRDVKGWVGKKMFNGLENSDNDVDHVSSMDQCKEVTKQNT 776
+ S D ++ K+F R++ ++ L S ++HV K +QN+
Sbjct: 694 CQPQHLNLSTDMAISLSKTFLREMGQPFSRE--EQLGKSLWSLEHVEKQSTSKPPQQQNS 751
>gi|410348520|gb|JAA40864.1| DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 [Pan troglodytes]
gi|410348522|gb|JAA40865.1| DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 [Pan troglodytes]
gi|410348524|gb|JAA40866.1| DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 [Pan troglodytes]
Length = 906
Score = 114 bits (286), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 140/335 (41%), Gaps = 79/335 (23%)
Query: 457 TLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDL-- 514
TL LNPAV F V + ++++ GT+ P++ F +L G +EA HV++
Sbjct: 594 TLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPVSDFRQQLLACAG--VEAEHVVEFSCGH 651
Query: 515 -----QVLTSVISTGPDNYPLNASYKTADGYKLMEK----LCN----------------- 548
+L VI +G N PL +++ + ++M++ LCN
Sbjct: 652 VIPPDNILPLVICSGISNQPLEFTFQKRELPQMMDEVGRILCNLCGVVPGGVVCFFPSYE 711
Query: 549 -------RWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKR 601
W + G RL A+K +F EPK Q E VL Y I C
Sbjct: 712 YLRQVHAHWEKGGLLGRLAARKKIFQEPKSAHQ--VEQVLLAYSRCIQ---ACG------ 760
Query: 602 VKREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDI 646
QE GA L+V GK ++VG+PFPNI
Sbjct: 761 --------------QERGQVTGALLLSVVGGKMSEGINFSDNLGRCVVMVGMPFPNIRSA 806
Query: 647 QVSLKKKYNDTY--RSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQ 704
++ K Y D R+ G N +A+NQ+IGR IRH+ D+ +I+LLD+R+
Sbjct: 807 ELQEKMTYLDQTLPRAPGQAPPGKALVENLCMKAVNQSIGRAIRHQKDFASIVLLDQRYA 866
Query: 705 EERNRAHISKWLRKSIKQYDSFDASLEGLKSFFRD 739
A + W+R ++ +F ++ ++ F R+
Sbjct: 867 RPPVLAKLPAWIRARVEVKATFGPAIAAMQKFHRE 901
Score = 85.9 bits (211), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 97/200 (48%), Gaps = 28/200 (14%)
Query: 146 IFYASRTHSQISQVISEYKKTAY--RVPMAVLASRKHYCTNKYVRD---KENIDEECKLL 200
I+Y SRTHSQ++Q + E KK+ + V + L SR++ C N+ V+ + I++ C +
Sbjct: 229 IYYCSRTHSQLAQFVHEVKKSPFGKDVRLVSLGSRQNLCVNEDVKSLGSVQLINDRCVDM 288
Query: 201 LGDRNL-------------------GCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVG 241
R+ CP F N H+ G L+ EV DIE L+ +G
Sbjct: 289 QRSRHEKKKGAEEEKPKRRRQEKQAACP-FYN-HEQMG--LLRDEALAEVKDIEQLLALG 344
Query: 242 QVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARD 301
+ R C YY +R AQLV PY +++ R A + ++ ++I+DEAHN+ D
Sbjct: 345 KEARACPYYGSRLAIPAAQLVVLPYQMLLHAATRQAAGIRLQDQVVIIDEAHNLIDTITG 404
Query: 302 AGSVDIDEDVLLKLQMELEQ 321
SV++ L + +L Q
Sbjct: 405 MHSVEVSGSQLCQAHSQLLQ 424
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 40/68 (58%), Gaps = 5/68 (7%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
VG I FP+ PY Q FM + L+ A + G + ESPTGTGKSLSL+C L+W
Sbjct: 8 VGAIHFPFPFTPYSIQEDFMAELYRVLE-AGKIG----IFESPTGTGKSLSLICGALSWL 62
Query: 80 QNCKLKNQ 87
++ + K +
Sbjct: 63 RDFEQKKR 70
>gi|332839865|ref|XP_520821.3| PREDICTED: probable ATP-dependent RNA helicase DDX11 isoform 4 [Pan
troglodytes]
Length = 880
Score = 114 bits (286), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 141/334 (42%), Gaps = 77/334 (23%)
Query: 457 TLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSEL----GVQFGTCLE--APHVI 510
TL LNPAV F V + ++++ GT+ P++ F +L GV+ +E HVI
Sbjct: 568 TLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHVI 627
Query: 511 DVDLQVLTSVISTGPDNYPLNASYKTADGYKLMEK----LCN------------------ 548
D +L VI +G N PL +++ + ++M++ LCN
Sbjct: 628 PPD-NILPLVICSGISNQPLEFTFQKRELPQMMDEVGRILCNLCGVVPGGVVCFFPSYEY 686
Query: 549 ------RWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRV 602
W + G RL A+K +F EPK Q E VL Y I C
Sbjct: 687 LRQVHAHWEKGGLLGRLAARKKIFQEPKSAHQ--VEQVLLAYSRCIQ---ACG------- 734
Query: 603 KREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQ 647
QE GA L+V GK ++VG+PFPNI +
Sbjct: 735 -------------QERGQVTGALLLSVVGGKMSEGINFSDNLGRCVVMVGMPFPNIRSAE 781
Query: 648 VSLKKKYNDTY--RSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQE 705
+ K Y D R+ G N +A+NQ+IGR IRH+ D+ +I+LLD+R+
Sbjct: 782 LQEKMAYLDQTLPRAPGQAPPGKALVENLCMKAVNQSIGRAIRHQKDFASIVLLDQRYAR 841
Query: 706 ERNRAHISKWLRKSIKQYDSFDASLEGLKSFFRD 739
A + W+R ++ +F ++ ++ F R+
Sbjct: 842 PPVLAKLPAWIRARVEVKATFGPAIAAMQKFHRE 875
Score = 85.9 bits (211), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 97/200 (48%), Gaps = 28/200 (14%)
Query: 146 IFYASRTHSQISQVISEYKKTAY--RVPMAVLASRKHYCTNKYVRD---KENIDEECKLL 200
I+Y SRTHSQ++Q + E KK+ + V + L SR++ C N+ V+ + I++ C +
Sbjct: 203 IYYCSRTHSQLAQFVHEVKKSPFGKDVRLVSLGSRQNLCVNEDVKSLGSVQLINDRCVDM 262
Query: 201 LGDRNL-------------------GCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVG 241
R+ CP F N H+ G L+ EV DIE L+ +G
Sbjct: 263 QRSRHEKKKGAEEEKPKRRRQEKQAACP-FYN-HEQMG--LLRDEALAEVKDIEQLLALG 318
Query: 242 QVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARD 301
+ R C YY +R AQLV PY +++ R A + ++ ++I+DEAHN+ D
Sbjct: 319 KEARACPYYGSRLAIPAAQLVVLPYQMLLHAATRQAAGIRLQDQVVIIDEAHNLIDTITG 378
Query: 302 AGSVDIDEDVLLKLQMELEQ 321
SV++ L + +L Q
Sbjct: 379 MHSVEVSGSQLCQAHSQLLQ 398
>gi|159152196|gb|ABW92606.1| CG4078-PA [Drosophila simulans]
Length = 235
Score = 114 bits (286), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 100/179 (55%), Gaps = 10/179 (5%)
Query: 143 TPTIFYASRTHSQISQVISEYKKTAY-RVPMAVLASRKHYCTNKYVRDK---ENIDEECK 198
P + YASRTHSQ++Q + E K+TAY + VL SR C + V + N CK
Sbjct: 36 VPKVIYASRTHSQLTQAMRELKRTAYANMRSVVLGSRDQLCIHPEVMRELGNSNKTNMCK 95
Query: 199 LLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADD 258
L + + C V + HP L+ + DIEDLV VGQ ++ C Y+A+R +
Sbjct: 96 LRVHSKT--CSFQMRVESRKDHPDLRGPT---IMDIEDLVKVGQRLKICPYFASRELVPQ 150
Query: 259 AQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDI-DEDVLLKLQ 316
A + F PY+Y+++P R A ++++ I+ILDEAHNIE I ++ SV I DV + ++
Sbjct: 151 ADITFMPYNYLLDPKARKANKIELGNTIVILDEAHNIEKICEESASVQIKSSDVAMAIE 209
>gi|50549437|ref|XP_502189.1| YALI0C23639p [Yarrowia lipolytica]
gi|74635004|sp|Q6CAX3.1|CHL1_YARLI RecName: Full=ATP-dependent RNA helicase CHL1; AltName:
Full=Chromosome loss protein 1
gi|49648056|emb|CAG82511.1| YALI0C23639p [Yarrowia lipolytica CLIB122]
Length = 803
Score = 114 bits (286), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 144/332 (43%), Gaps = 68/332 (20%)
Query: 28 PYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW--------- 78
PY PY Q+ FM + ++ + + ESPTGTGK+LSL+C ++ W
Sbjct: 12 PYTPYPIQVDFMEALYDCIE-----SYKVGIFESPTGTGKTLSLICGSMTWLRKNKAQLA 66
Query: 79 ---------------QQNCKL---------------------KNQLANISHSKPDTEAVT 102
+Q +L KN A IS+ + A
Sbjct: 67 VSTASADENEPAWVLEQTIQLAREEFSRNREMLQKRLDKMRRKNMRARISYEQGFKRAKK 126
Query: 103 DP-LANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKKMTPTIFYASRTHSQISQVIS 161
P + F+PE I P + +A +N ++ IF ASRTHSQ+SQ +
Sbjct: 127 APEPVDDSQFLPEDYSEVIKPEVQRLLSALAPPVENDFQEPVKIIF-ASRTHSQLSQFVG 185
Query: 162 EYKKTAY----------RVPMAVLASRKHYCTNKYVRDKENI---DEECKLLLGDRNLGC 208
+ + T + + L SRK C N V ++ ++ C+ L + GC
Sbjct: 186 QMQHTTFPPSSDLQDLESTKLISLGSRKQLCINPRVSHMNSVQAMNDACRDLREGKKGGC 245
Query: 209 PQFKNVHKVRGHP---SLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCP 265
+KN H G + + E+ DIEDL +G+ C YYA+R+ ++++ P
Sbjct: 246 KYYKNPHDALGKVDINTFRDTTLAEILDIEDLYKLGKHTSTCPYYASRASIPASEVITVP 305
Query: 266 YSYIINPVIRGAMEVDIKGAILILDEAHNIED 297
Y +++ R A+++ +K +I+I+DEAHN+ D
Sbjct: 306 YQILLSRSARKAIDLPVKNSIVIIDEAHNLLD 337
Score = 94.0 bits (232), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 139/335 (41%), Gaps = 82/335 (24%)
Query: 458 LSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSEL-------GVQFGTCLEAPHVI 510
L L+P+ FKD+ E + ++L GT+ P + L ++ +C HVI
Sbjct: 490 LKYQLLDPSEPFKDIVENARCVVLAGGTMEPTGDYLEYLLPYLSQDQIKLFSC---GHVI 546
Query: 511 DVDLQVLTSVISTGPDNYPLNASYKTAD----------------------------GYKL 542
+ VI GP NY N ++ + YK
Sbjct: 547 PPQ-NLSVQVIPNGP-NYSFNFTFDKRNDEKMILDVAITLLVYSKIIPEGMVVFFPSYKY 604
Query: 543 MEKLCNRWRETGQ-----WSRLNAKKPLFVEPKGGSQED-FEIVLKHYYNSISQGSKCAV 596
+E++ W++ + + LN +K +FVE SQ D E L Y + +G+
Sbjct: 605 LEQVVAVWKKAKKDGKNIYEILNDQKRIFVE----SQHDSVEKTLSEYAEEVPKGAILLS 660
Query: 597 VRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYND 656
V ++ EG N + + R ++G+PFPN+ ++ K+KY +
Sbjct: 661 VVGGKMS-EGINFSD----------------GLARAVFMIGLPFPNLMSAEIIAKRKYIE 703
Query: 657 TYRSSKNLLSG--------------NEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDER 702
S K G ++Y N RA+NQ++GR IRH DY I LLD R
Sbjct: 704 QSVSEKMKAKGVSAKEALEASKGAARDFYMNICLRAVNQSVGRAIRHANDYACIFLLDGR 763
Query: 703 FQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFF 737
F + + +SKW+R+ I++ SF +L ++ FF
Sbjct: 764 FGKPEIQKKLSKWMREGIRE-GSFKEALGEVQQFF 797
>gi|366990349|ref|XP_003674942.1| hypothetical protein NCAS_0B04860 [Naumovozyma castellii CBS 4309]
gi|342300806|emb|CCC68570.1| hypothetical protein NCAS_0B04860 [Naumovozyma castellii CBS 4309]
Length = 774
Score = 114 bits (286), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 177/808 (21%), Positives = 320/808 (39%), Gaps = 175/808 (21%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+++ + V FPY + Y Q +MC + TLD +++LE P+GTGK++SLL T+
Sbjct: 3 FYIDDLPVLFPYPKIYPEQYHYMCDLKKTLD-----AGGNSILEMPSGTGKTVSLLSLTI 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNK 136
A+Q + ++ S + + E L N + A+ + +
Sbjct: 58 AYQMHYPEHRKIIYCSRTMSEIEKALVELENLMDY----------------RARELGHRE 101
Query: 137 NVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE 196
N + + SR + + V+S+ +K V+ + TN + K D
Sbjct: 102 NFR-----GLGLTSRKNLCLHPVVSKERKG------TVVDEKCRRMTNGVAKRKLEQDPN 150
Query: 197 CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMA 256
D L C +N++K+ L G V E L+ + C Y+ R M
Sbjct: 151 -----ADAEL-CEYHENLYKMEVGDYLPNG----VFSFEKLIKYCEERTICPYFVVRRMI 200
Query: 257 DDAQLVFCPYSYIINPVI--RGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLL- 313
++ Y Y+++P I R + EV K +I+I DEAHNI+++ ++ S+D+ DVL
Sbjct: 201 SMCNIMIYSYHYLLDPKIAERVSNEVS-KDSIVIFDEAHNIDNVCIESLSLDLTNDVLRR 259
Query: 314 ---------------------KLQMELEQVCS------VNPMIYQPLIE---MTQDLV-- 341
KLQ E +++ + P+ +P +E +++DL+
Sbjct: 260 ATKGANALEERIDDVRKVDAQKLQDEYDKLVEGLHTADILPVQEEPFVETPVLSKDLLKE 319
Query: 342 ---GWIERRK--ATLAKREFQHFFSCWTGDKALRELQEANIS-RQCFPILLECATKAIKE 395
G I R + + KR ++ T K L + E S Q L K ++
Sbjct: 320 AIPGNIRRAEHFVSFLKRLIEYL---KTRMKVLHVISETPKSFLQHLKQLTFIDRKPLRF 376
Query: 396 ATDTESELPHLSGMSVITLEGL--FSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGN 453
++ S L + + V +E + F + ++ + L ++ Y ++ P
Sbjct: 377 CSERLSLL--VRTLEVTEVEDFTALKDIATFATLISTYEDGFLLIIEPYEIENAAVPNPI 434
Query: 454 WTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVD 513
T CL+ ++ K V E S+I+TSGT+SP++ + L F T L+ + + +
Sbjct: 435 MRFT----CLDASIAIKPVFERFSSVIITSGTISPLDMYPRMLN--FETVLQKSYAMTLA 488
Query: 514 LQ-VLTSVISTGPDNYPLNASYK---------------------TADG-------YKLME 544
+ L +++ G D +++ ++ T DG Y ME
Sbjct: 489 KKSFLPMIVTKGSDQVAISSRFEIRNDPSIVRNYGSMLVEFAKITPDGMVVFFPSYLYME 548
Query: 545 KLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKR 604
+ + W+ G + K + VE + + L+ Y + S G
Sbjct: 549 SIVSMWQTMGILDEVWKHKLILVETPDAQET--SLALETYRKACSNG------------- 593
Query: 605 EGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPN---INDIQVSLKKKYNDTYRSS 661
+GA L+V RGK+ GI F + + + + +Y ++
Sbjct: 594 -----------------RGAILLSVARGKVSEGIDFDHQYGRTVLMIGIPFQYTESRILK 636
Query: 662 KNL--------LSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHIS 713
L + N++ A R Q +GR +R + DYG ++L D RF R R +
Sbjct: 637 ARLEFLRENYQIRENDFLSFDAMRHAAQCLGRVLRGKDDYGVMVLADRRFS--RKRTQLP 694
Query: 714 KWLRKSIKQYD---SFDASLEGLKSFFR 738
KW+ + + D S D ++ K F R
Sbjct: 695 KWIAQGLSDADLNLSTDMAISNTKQFLR 722
>gi|410212712|gb|JAA03575.1| DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 [Pan troglodytes]
Length = 906
Score = 114 bits (286), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 140/335 (41%), Gaps = 79/335 (23%)
Query: 457 TLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDL-- 514
TL LNPAV F V + ++++ GT+ P++ F +L G +EA HV++
Sbjct: 594 TLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPVSDFRQQLLACAG--VEAEHVVEFSCGH 651
Query: 515 -----QVLTSVISTGPDNYPLNASYKTADGYKLMEK----LCN----------------- 548
+L VI +G N PL +++ + ++M++ LCN
Sbjct: 652 VIPPDNILPLVICSGISNQPLEFTFQKRELPQMMDEVGRILCNLCGVVSGGVVCFFPSYE 711
Query: 549 -------RWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKR 601
W + G RL A+K +F EPK Q E VL Y I C
Sbjct: 712 YLRQVHAHWEKGGLLGRLAARKKIFQEPKSAHQ--VEQVLLAYSRCIQ---ACG------ 760
Query: 602 VKREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDI 646
QE GA L+V GK ++VG+PFPNI
Sbjct: 761 --------------QERGQVTGALLLSVVGGKMSEGINFSDNLGRCVVMVGMPFPNIRSA 806
Query: 647 QVSLKKKYNDTY--RSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQ 704
++ K Y D R+ G N +A+NQ+IGR IRH+ D+ +I+LLD+R+
Sbjct: 807 ELQEKMAYLDQTLPRAPGQAPPGKALVENLCMKAVNQSIGRAIRHQKDFASIVLLDQRYA 866
Query: 705 EERNRAHISKWLRKSIKQYDSFDASLEGLKSFFRD 739
A + W+R ++ +F ++ ++ F R+
Sbjct: 867 RPPVLAKLPAWIRARVEVKATFGPAIAAMQKFHRE 901
Score = 85.9 bits (211), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 97/200 (48%), Gaps = 28/200 (14%)
Query: 146 IFYASRTHSQISQVISEYKKTAY--RVPMAVLASRKHYCTNKYVRD---KENIDEECKLL 200
I+Y SRTHSQ++Q + E KK+ + V + L SR++ C N+ V+ + I++ C +
Sbjct: 229 IYYCSRTHSQLAQFVHEVKKSPFGKDVRLVSLGSRQNLCVNEDVKSLGSVQLINDRCVDM 288
Query: 201 LGDRNL-------------------GCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVG 241
R+ CP F N H+ G L+ EV DIE L+ +G
Sbjct: 289 QRSRHEKKKGAEEEKPKRRRQEKQAACP-FYN-HEQMG--LLRDEALAEVKDIEQLLALG 344
Query: 242 QVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARD 301
+ R C YY +R AQLV PY +++ R A + ++ ++I+DEAHN+ D
Sbjct: 345 KEARACPYYGSRLAIPAAQLVVLPYQMLLHAATRQAAGIRLQDQVVIIDEAHNLIDTITG 404
Query: 302 AGSVDIDEDVLLKLQMELEQ 321
SV++ L + +L Q
Sbjct: 405 MHSVEVSGSQLCQAHSQLLQ 424
Score = 55.1 bits (131), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 40/68 (58%), Gaps = 5/68 (7%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
VG I FP+ PY Q FM + L+ A + G + ESPTGTGKSLSL+C L+W
Sbjct: 8 VGAIHFPFPFTPYSIQEDFMAELYRVLE-AGKIG----IFESPTGTGKSLSLICGALSWL 62
Query: 80 QNCKLKNQ 87
++ + K +
Sbjct: 63 RDFEQKKR 70
>gi|19113937|ref|NP_593025.1| transcription factor TFIIH complex subunit Rad15
[Schizosaccharomyces pombe 972h-]
gi|1709995|sp|P26659.2|RAD15_SCHPO RecName: Full=DNA repair helicase rad15; AltName: Full=Protein
rhp3; AltName: Full=RAD3 homolog
gi|1177345|emb|CAA93221.1| transcription factor TFIIH complex subunit Rad15
[Schizosaccharomyces pombe]
Length = 772
Score = 114 bits (286), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 174/806 (21%), Positives = 312/806 (38%), Gaps = 172/806 (21%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+++ + + FPY + Y Q +MC + +LD ALLE P+GTGK++SLL +
Sbjct: 3 FYIDDLPILFPYPRIYPEQYQYMCDLKHSLDAGGI-----ALLEMPSGTGKTISLLSLIV 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNK 136
++QQ+ +L S + + + L + +T+Q+
Sbjct: 58 SYQQHYPEHRKLIYCSRTMSEIDKALAELKRLMAY---------------RTSQLGYEEP 102
Query: 137 NVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKEN---I 193
+ +T SRK+ C + VR ++N +
Sbjct: 103 FLGLGLT---------------------------------SRKNLCLHPSVRREKNGNVV 129
Query: 194 DEECKLLLG-----DRNLG-----CPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQV 243
D C+ L R G C N+ + H + G V ++D+ G+
Sbjct: 130 DARCRSLTAGFVREQRLAGMDVPTCEFHDNLEDLEPHSLISNG----VWTLDDITEYGEK 185
Query: 244 VRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDA 302
C Y+ R M ++ Y Y+++P I + ++ K I++ DEAHNI+++ ++
Sbjct: 186 TTRCPYFTVRRMLPFCNVIIYSYHYLLDPKIAERVSRELSKDCIVVFDEAHNIDNVCIES 245
Query: 303 GSVDIDEDVLLKLQ---MELEQ-VCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQH 358
S+D+ E L K + LEQ V V + L + Q LV ++ A A E Q
Sbjct: 246 LSIDLTESSLRKASKSILSLEQKVNEVKQSDSKKLQDEYQKLVRGLQ--DANAANDEDQF 303
Query: 359 FFSCWTGDKALRELQEANISR--------QCFPILLECATKAIKEATDT-ESELPHLSGM 409
+ + L+E NI R + F L+ K + +T S L H+ +
Sbjct: 304 MANPVLPEDVLKEAVPGNIRRAEHFIAFLKRFVEYLKTRMKVLHVIAETPTSFLQHVKDI 363
Query: 410 SVITLEGL---------------------FSSL---TYFFSRNGSHVSDYQLALQKYIKR 445
+ I + L F SL F + ++ + L L+ +
Sbjct: 364 TFIDKKPLRFCAERLTSLVRALQISLVEDFHSLQQVVAFATLVATYERGFILILEPFETE 423
Query: 446 DSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLE 505
++ P L CL+ ++ K V E S+I+TSGTLSP++ + L QF T ++
Sbjct: 424 NATVPNP----ILRFSCLDASIAIKPVFERFRSVIITSGTLSPLDMYPKML--QFNTVMQ 477
Query: 506 APHVIDVDLQ-VLTSVISTGPDNYPLNASYK---------------------TADG---- 539
+ + + L V++ G D +++ ++ T DG
Sbjct: 478 ESYGMSLARNCFLPMVVTRGSDQVAISSKFEARNDPSVVRNYGNILVEFSKITPDGLVAF 537
Query: 540 ---YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAV 596
Y +E + + W+ G + K + VE + + L+ Y + S G +
Sbjct: 538 FPSYLYLESIVSSWQSMGILDEVWKYKLILVETPDPHET--TLALETYRAACSNGRGAVL 595
Query: 597 VRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKY-N 655
+ R K D + + G R I+ GIP+ + + ++
Sbjct: 596 LSVARGKVSEGVDFD--------HHYG-------RAVIMFGIPYQYTESRVLKARLEFLR 640
Query: 656 DTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKW 715
DTY+ + ++ A R Q +GR +R + D+G ++L D+R+ R + KW
Sbjct: 641 DTYQ-----IREADFLTFDAMRHAAQCLGRVLRGKDDHGIMVLADKRYGRSDKRTKLPKW 695
Query: 716 LRKSIKQYD---SFDASLEGLKSFFR 738
+++ I + S D SL K F R
Sbjct: 696 IQQYITEGATNLSTDMSLALAKKFLR 721
>gi|332839861|ref|XP_003313865.1| PREDICTED: probable ATP-dependent RNA helicase DDX11 isoform 1 [Pan
troglodytes]
gi|410258634|gb|JAA17284.1| DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 [Pan troglodytes]
gi|410301530|gb|JAA29365.1| DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 [Pan troglodytes]
Length = 906
Score = 114 bits (286), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 141/334 (42%), Gaps = 77/334 (23%)
Query: 457 TLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSEL----GVQFGTCLE--APHVI 510
TL LNPAV F V + ++++ GT+ P++ F +L GV+ +E HVI
Sbjct: 594 TLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHVI 653
Query: 511 DVDLQVLTSVISTGPDNYPLNASYKTADGYKLMEK----LCN------------------ 548
D +L VI +G N PL +++ + ++M++ LCN
Sbjct: 654 PPD-NILPLVICSGISNQPLEFTFQKRELPQMMDEVGRILCNLCGVVPGGVVCFFPSYEY 712
Query: 549 ------RWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRV 602
W + G RL A+K +F EPK Q E VL Y I C
Sbjct: 713 LRQVHAHWEKGGLLGRLAARKKIFQEPKSAHQ--VEQVLLAYSRCIQ---ACG------- 760
Query: 603 KREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQ 647
QE GA L+V GK ++VG+PFPNI +
Sbjct: 761 -------------QERGQVTGALLLSVVGGKMSEGINFSDNLGRCVVMVGMPFPNIRSAE 807
Query: 648 VSLKKKYNDTY--RSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQE 705
+ K Y D R+ G N +A+NQ+IGR IRH+ D+ +I+LLD+R+
Sbjct: 808 LQEKMAYLDQTLPRAPGQAPPGKALVENLCMKAVNQSIGRAIRHQKDFASIVLLDQRYAR 867
Query: 706 ERNRAHISKWLRKSIKQYDSFDASLEGLKSFFRD 739
A + W+R ++ +F ++ ++ F R+
Sbjct: 868 PPVLAKLPAWIRARVEVKATFGPAIAAMQKFHRE 901
Score = 85.9 bits (211), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 97/200 (48%), Gaps = 28/200 (14%)
Query: 146 IFYASRTHSQISQVISEYKKTAY--RVPMAVLASRKHYCTNKYVRD---KENIDEECKLL 200
I+Y SRTHSQ++Q + E KK+ + V + L SR++ C N+ V+ + I++ C +
Sbjct: 229 IYYCSRTHSQLAQFVHEVKKSPFGKDVRLVSLGSRQNLCVNEDVKSLGSVQLINDRCVDM 288
Query: 201 LGDRNL-------------------GCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVG 241
R+ CP F N H+ G L+ EV DIE L+ +G
Sbjct: 289 QRSRHEKKKGAEEEKPKRRRQEKQAACP-FYN-HEQMG--LLRDEALAEVKDIEQLLALG 344
Query: 242 QVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARD 301
+ R C YY +R AQLV PY +++ R A + ++ ++I+DEAHN+ D
Sbjct: 345 KEARACPYYGSRLAIPAAQLVVLPYQMLLHAATRQAAGIRLQDQVVIIDEAHNLIDTITG 404
Query: 302 AGSVDIDEDVLLKLQMELEQ 321
SV++ L + +L Q
Sbjct: 405 MHSVEVSGSQLCQAHSQLLQ 424
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 40/68 (58%), Gaps = 5/68 (7%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
VG I FP+ PY Q FM + L+ A + G + ESPTGTGKSLSL+C L+W
Sbjct: 8 VGAIHFPFPFTPYSIQEDFMAELYRVLE-AGKIG----IFESPTGTGKSLSLICGALSWL 62
Query: 80 QNCKLKNQ 87
++ + K +
Sbjct: 63 RDFEQKKR 70
>gi|302771019|ref|XP_002968928.1| hypothetical protein SELMODRAFT_91042 [Selaginella moellendorffii]
gi|300163433|gb|EFJ30044.1| hypothetical protein SELMODRAFT_91042 [Selaginella moellendorffii]
Length = 768
Score = 114 bits (286), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 184/849 (21%), Positives = 316/849 (37%), Gaps = 241/849 (28%)
Query: 18 YHVGGIQVEFPYQ-PYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+ + G+ V FPY+ Y Q +M + LD GHC LLE PTGTGK+++LL
Sbjct: 3 FVIEGLTVYFPYEFIYREQYAYMVELKHALDAR---GHC--LLEMPTGTGKTITLLSLIT 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNK 136
++Q LAN S +K
Sbjct: 58 SYQ--------LANPSLAK----------------------------------------- 68
Query: 137 NVKKKMTPTIFYASRTHSQISQVISEYKK-----------TAYRVPMAVLASRKHYCTNK 185
+ Y +RT ++ +V+ E ++ + ++ L+SRK+ C +
Sbjct: 69 ---------LIYCTRTVHEMEKVLDELRRLHLYQEKEIGSSRAKILALGLSSRKNLCIHP 119
Query: 186 YV---RDKENIDEECKLLLG-------DRNLG---CPQFKNVHKVRGHPSLQKGGCHEVH 232
V +E++D C+ L + NL C ++ K L G V+
Sbjct: 120 VVSGETSRESVDAGCRKLTASWVRAAAETNLDIETCSFYQGYEKQGSEQPLPPG----VY 175
Query: 233 DIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDE 291
+ DL G+ C Y+ AR M A +V Y Y+++P + G + ++ K I++ DE
Sbjct: 176 TLHDLRVYGRQRGWCPYFLARQMIQFANVVVYNYQYLLDPKVSGIISKEMQKECIVVFDE 235
Query: 292 AHNIEDIARDAGSVDIDEDVLLKLQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATL 351
AHNI+++ +A SV++ ++ L + +N +I + L R L
Sbjct: 236 AHNIDNVCIEALSVNLRQN---NLDGASRNIHKLNQIISRFKETDANRLRQEYNRLVEGL 292
Query: 352 AKREFQHFFSCWTGDKALRE--LQEA---NISR-QCFPILLECATKAIKEATDTES---E 402
A++ H W + L E L+EA NI R + F L+ A + ++E DT++ E
Sbjct: 293 AQQGNLHGSDNWLANPVLPEDILREAVPGNIRRAEHFVAFLQRAVQYLRERLDTDTVVKE 352
Query: 403 LPHLSGMSVITLEGL-----------------------------FSSLTYFFSRNGSHVS 433
P ++ T GL ++ F + G++
Sbjct: 353 GPVSFTTTMSTAAGLDQKALKFCYDRLHSLLLTLEVTEIDEFLHVQTVCNFLTLVGTYTR 412
Query: 434 DYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFS 493
+ + ++ Y +R P L L CL+ ++ K V + S+++TSGTLSP++ +
Sbjct: 413 GFSIIIEPYDERMPHIPDP----VLQLSCLDASLAIKPVFDRFQSVVITSGTLSPIDLYP 468
Query: 494 SELGVQFGTCLEAPHVIDVDLQVLTS------VISTGPDNYPLNASY------------- 534
L P +I LT +++ G D P+++ +
Sbjct: 469 RLLNFN-------PVIIHSFTMTLTRDCLCPMILARGSDQLPVSSKFDMRSDPGVVRNYG 521
Query: 535 --------KTADG-------YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEI 579
DG Y M+ + N W E G + K +F+E +Q+ E
Sbjct: 522 RLLLEMVATVPDGVVCFFVSYSYMDGIINSWNEMGILQEVMQHKLVFIE----TQDYVET 577
Query: 580 VLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIP 639
L + Q C +GA F +V RGK+ GI
Sbjct: 578 TLA--LENFRQACDCG--------------------------RGAVFFSVARGKVAEGID 609
Query: 640 FPNIND---------IQVSLKKKYN-------DTYR-----------SSKNLLSGNEWYC 672
F Q +L K N DT++ + +L S +
Sbjct: 610 FDRHYGRLVIMFGVPFQYTLSKILNARLEYLRDTFQIKEGDFLTFDAVASSLRSVLRLFV 669
Query: 673 NQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYD---SFDAS 729
R Q +GR IR + DYG +I D+R+ R + +W++ +++ S D +
Sbjct: 670 YLYQRQAAQCVGRVIRSKADYGMMIFADKRYNLPNKRNKLPQWIQSQLREEHLNLSTDMA 729
Query: 730 LEGLKSFFR 738
+ + F R
Sbjct: 730 VHIAREFLR 738
>gi|402224656|gb|EJU04718.1| DNA repair helicase [Dacryopinax sp. DJM-731 SS1]
Length = 798
Score = 114 bits (286), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 164/802 (20%), Positives = 319/802 (39%), Gaps = 152/802 (18%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+++ G+ + FPY + Y Q +MC + TLD H +LE P+GTGK++SLL +
Sbjct: 3 FNIDGLPIIFPYDRIYPEQYSYMCDLKKTLD-----AQGHGVLEMPSGTGKTVSLLSLIV 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNK 136
++QQ+ +L S + P+ E L + + +Q +
Sbjct: 58 SYQQHSPHPRKLIYCSRTVPEIEKALSELQRLMKY---------------RVSQAETPEE 102
Query: 137 NVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE 196
+K++ + SR + + +S+ KK V+ +R TN +K
Sbjct: 103 RMKEESFIGLGLTSRKNLCLHPDVSKEKKG------KVVDARCRDLTNSAACEK------ 150
Query: 197 CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMA 256
G N G + H+ G ++ + +++ G+ C Y+ R M
Sbjct: 151 -----GRANPGSVPLCDWHERLGEKEPGNLIPPGIYTLAEVLQYGRDEGVCPYFTIRRMM 205
Query: 257 DDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVL--- 312
++ + Y+++P + + + K AI++ DEAHNI+++ ++ S+D+ +L
Sbjct: 206 PFVDVIIYSFHYLLDPKVAEQVSKEFSKDAIVVFDEAHNIDNVCIESLSIDLTRPMLDSA 265
Query: 313 ----LKLQMELEQVCSVNPMI----YQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWT 364
++L ++E++ + Y L+E Q+ A +A +
Sbjct: 266 TRSVVRLTEKIEEIKETDASKLQDEYAKLVEGLQEANNETSDEDAFVA--------NAVL 317
Query: 365 GDKALRELQEANISR--------QCFPILLECATKAIKEATDTE-SELPHLSGMSVIT-- 413
D L+E NI + + F L+ + + +T S L HL ++ I
Sbjct: 318 PDDLLKEAIPGNIRKAEHFIAFLKRFVEYLKTRMRVLHVVAETPLSFLQHLKDITYIERR 377
Query: 414 --------LEGLFSSL------TYF----FSRNGSHVSDYQ----LALQKYIKRDSKNPG 451
L+ L +L YF + + V+ Y+ L L+ + + P
Sbjct: 378 PLRFCAERLQSLVRTLELNQLDEYFALQKVASFATLVATYEKGFLLILEPFETETATVPN 437
Query: 452 GNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVID 511
+ T CL+P++ K + E S+++TSGT+SP++ + L QF ++ + +
Sbjct: 438 PIFHFT----CLDPSLAIKPIFERFSSVVITSGTISPLDMYPKML--QFTPVIQESYPMT 491
Query: 512 VDLQ-VLTSVISTGPDNYPLNASYK---------------------TADG-------YKL 542
+ L VI+ G D +++ ++ DG Y
Sbjct: 492 LTRNCFLPLVITRGSDQVAVSSRFEVRNDPAVVRNFGSILIEYSKIVPDGIVAFFPSYLY 551
Query: 543 MEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRV 602
ME + W + G + + K +FVE ++ I L++Y + + G ++ R
Sbjct: 552 MESIVAAWNDMGILNEVWKNKLIFVETPDANETS--IALENYRRACNNGRGAVMLSVARG 609
Query: 603 KREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKY-NDTYRSS 661
K D + + G R I+ G+P+ + + +Y D YR
Sbjct: 610 KVSEGIDFD--------HNYG-------RAVIMFGVPYQYTQSRILRARLEYLRDAYR-- 652
Query: 662 KNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIK 721
+ +E+ A R Q +GR +R + D+G ++ D+R+ RA + +W+ + I
Sbjct: 653 ---IRESEFLAFDAMRNAAQCVGRVLRGKTDWGLMVFADKRYARADKRAKLPRWMNQYIS 709
Query: 722 QYD---SFDASLEGLKSFFRDV 740
+ S D ++ K F R +
Sbjct: 710 ETASNLSTDMAIVLSKLFMRQI 731
>gi|16416010|emb|CAB91361.2| probable excision repair protein rhp3 [Neurospora crassa]
Length = 806
Score = 114 bits (285), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 166/806 (20%), Positives = 316/806 (39%), Gaps = 170/806 (21%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+++ + V FPY + Y Q +M + TLD G+C +LE P+GTGK+++LL +
Sbjct: 3 FNIDDLPVLFPYPRIYPEQYAYMVDLKKTLDAG---GNC--VLEMPSGTGKTVTLLSLIV 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNK 136
A+QQ + PE + T + + + +
Sbjct: 58 AYQQ------------------------------YYPEHRKLIYCSRTMSEIEKALVELR 87
Query: 137 NVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKEN---I 193
+ K F A R + E++ L SRK+ C + V+ +++ +
Sbjct: 88 ALMK------FRAERLGHE-----EEFRGLG-------LTSRKNLCLHPSVKREKSGAIV 129
Query: 194 DEECKLLL----------GDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQV 243
D C+ L G+ C N+ + H + G + ++ L+ G+
Sbjct: 130 DARCRSLTAGFVKEKREKGENVETCVYHDNLDLLEPHNLIPNG----IWTLDGLMRYGEE 185
Query: 244 VRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDA 302
+ C Y+ AR M ++ Y Y+++P I + D+ K I++ DEAHNI+++ ++
Sbjct: 186 KKQCPYFTARRMMQHCNVIIYSYHYLLDPKIAERVSKDLSKDCIVVFDEAHNIDNVCIES 245
Query: 303 GSVDIDEDVLLKLQMELEQV-CSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFS 361
S DI +D L++ + + ++ M ++ + +E K R+ F +
Sbjct: 246 LSTDITQDSLMRATRGAQNLEAKISEMKDSDQEKLQSEYEKLVEGLKGLDEGRQEDAFMA 305
Query: 362 CWT-GDKALRELQEANISR--------QCFPILLECATKAIKEATDT-ESELPHLSGMSV 411
T D L+E NI R + F L+ K + ++T S L HL +
Sbjct: 306 NPTLPDDLLKEAVPGNIRRAEHFVAFLRRFIEYLKTRMKVRQVISETPPSFLAHLKEYTF 365
Query: 412 ITLEGL------------------------FSSLTYFFSRNGSHVSDYQLALQKYIKRDS 447
I + L + F + ++ + L L+ Y +
Sbjct: 366 IEKKPLRFCAERLTSLVRTLELTNIEDYRPLQEVATFATLVATYEKGFLLILEPYESDTA 425
Query: 448 KNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAP 507
K P L CL+ A+ K V + S+I+TSGT+SP+ + L F T ++
Sbjct: 426 KTPNP----VLHFTCLDAAIAIKPVFDRFSSVIITSGTISPLEMYPKMLN--FETVVQES 479
Query: 508 HVIDVDLQ-VLTSVISTGPDNYPLNASYK---------------------TADG------ 539
+ + + + L +++ G D ++ S++ T DG
Sbjct: 480 YAMTLARRSFLPMIVTRGSDQASISTSFQVRNEPSVVRNYGNLLTEFARITPDGMVVFFP 539
Query: 540 -YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVR 598
Y ME + + W+ G + K + VE + + L+ Y + G ++
Sbjct: 540 SYLYMESIISMWQGMGILDEVWKHKLILVETPDAQETS--LALETYRTACCNGRGAILLC 597
Query: 599 KKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKY-NDT 657
R K D + ++ G R + +G+PF + + ++ +T
Sbjct: 598 VARGKVSEGIDFD--------HQYG-------RTVLCIGVPFQYTESRILKARLEFLRET 642
Query: 658 YRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLR 717
YR + N++ A R Q +GR +R + DYG ++L D RF + RA + KW+
Sbjct: 643 YR-----IRENDFLSFDAMRHAAQCLGRVLRGKDDYGVMVLADRRFM--KKRAQLPKWIN 695
Query: 718 KSIKQYD---SFDASLEGLKSFFRDV 740
++ + + S D ++ ++F + +
Sbjct: 696 QAFLEANTNLSTDMAVGNARAFLKQM 721
>gi|401625969|gb|EJS43941.1| rad3p [Saccharomyces arboricola H-6]
Length = 777
Score = 114 bits (285), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 175/796 (21%), Positives = 317/796 (39%), Gaps = 151/796 (18%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+++ + V FPY + Y Q +MC + TLD +++LE P+GTGK++SLL T+
Sbjct: 3 FYIDDLPVLFPYPKIYPEQYNYMCDIKRTLDVG-----GNSILEMPSGTGKTVSLLSLTI 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNK 136
A+Q + ++ S + + E L N + +T ++
Sbjct: 58 AYQMHYPEHRKIIYCSRTMSEIEKALVELENLMDY---------------RTKELGYQED 102
Query: 137 NVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE 196
+T SR + + +S+ +K V+ + TN + K D
Sbjct: 103 FRGLGLT------SRKNLCLHPEVSKERKG------TVVDEKCRRMTNGQAKRKLEEDSN 150
Query: 197 CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMA 256
+ L C +N++ + L KG V E L+ + C Y+ R M
Sbjct: 151 ANVEL------CEYHENLYNIEVEDYLPKG----VFSFEKLLRYCEEKTLCPYFIVRRMI 200
Query: 257 DDAQLVFCPYSYIINPVI--RGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLL- 313
++ Y Y+++P I R + EV K +I+I DEAHNI+++ ++ S+D+ D L
Sbjct: 201 SLCNIIIYSYHYLLDPKIAERVSNEVS-KDSIVIFDEAHNIDNVCIESLSLDLTTDALRR 259
Query: 314 ---------------------KLQMELEQVC----SVNPMIYQ--PLIE---MTQDLV-- 341
KLQ E E++ S + + Q P +E + QDL+
Sbjct: 260 ATRGANALDERISEVRKVDSQKLQDEYEKLVQGLHSADILTEQEEPFVETPVLPQDLLTE 319
Query: 342 ---GWIERRK--ATLAKREFQHFFSCWTGDKALRELQEANIS-RQCFPILLECATKAIKE 395
G I R + + KR ++ T K L + E S Q L K ++
Sbjct: 320 AIPGNIRRAEHFVSFLKRLIEYL---KTRMKVLHVISETPKSFLQHLKQLTFIERKPLRF 376
Query: 396 ATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWT 455
++ S L ++ + + F + ++ + L ++ Y ++ P
Sbjct: 377 CSERLSLLVRTLEVAEVEDFTALKDIATFATLISTYEEGFLLIIEPYEIENAAVPNPIMR 436
Query: 456 HTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQ 515
T CL+ ++ K V E S+I+TSGT+SP++ + L F T L+ + + + +
Sbjct: 437 FT----CLDASIAIKPVFERFSSVIITSGTISPLDMYPRMLN--FKTVLQKSYAMTLAKK 490
Query: 516 -VLTSVISTGPDNYPLNASYK---------------------TADG-------YKLMEKL 546
L +I+ G D +++ ++ T DG Y ME +
Sbjct: 491 SFLPMIITKGSDQVAISSRFEIRNDPSIVRNYGSMLVEFAKITPDGMVVFFPSYLYMESI 550
Query: 547 CNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREG 606
+ W+ G + K + VE + + L+ Y + S G ++ R K
Sbjct: 551 VSMWQTMGILDEVWKHKLILVETPDAQETS--LALETYRKACSNGRGAILLSVARGKVSE 608
Query: 607 NNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKY-NDTYRSSKNLL 665
D + ++ G R +++GIPF + + ++ + YR +
Sbjct: 609 GIDFD--------HQYG-------RTVLMIGIPFQYTESRILKARLEFMRENYR-----I 648
Query: 666 SGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYD- 724
N++ A R Q +GR +R + DYG ++L D RF R R+ + KW+ + + D
Sbjct: 649 RENDFLSFDAMRHAAQCLGRVLRGKDDYGVMVLADRRFS--RKRSQLPKWIAQGLSDADL 706
Query: 725 --SFDASLEGLKSFFR 738
S D ++ K F R
Sbjct: 707 NLSTDMAISNTKQFLR 722
>gi|424513271|emb|CCO66855.1| predicted protein [Bathycoccus prasinos]
Length = 770
Score = 114 bits (285), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 174/822 (21%), Positives = 319/822 (38%), Gaps = 212/822 (25%)
Query: 52 DGHCHALLESPTGTGKSLSLLCSTLAWQ----QNCKLKNQLANISHSKPDTEAVTDPLAN 107
D H LE PTGTGK+++LL ++Q +C +L + + P+ E V L
Sbjct: 9 DAKGHGALEMPTGTGKTITLLSLITSYQLQYPHSC---GKLIYCTRTVPEMEKVLAELK- 64
Query: 108 GGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKKMTPTIFYASRTHSQISQVISEYKKTA 167
+ + + + +T +A+ +SR + ++ +SE
Sbjct: 65 ---VLQKYREEHVEKGKEEETHILALG-------------LSSRKNLCVNPKVSEEGSRE 108
Query: 168 YRVPMAVLASRKHYCTNKYVRDKENIDEE--------CKLLLGDRNLG----CPQFKNVH 215
+ +R T +VRDK + E K +L + + C ++++
Sbjct: 109 ------SVDARCRNLTASWVRDKAKEEAEEGDQKGTKIKTVLENEKIRKSNLCEFYEDLE 162
Query: 216 KVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIR 275
+ + KG V+ ++DL G+ R C Y+ AR A +V Y Y+++P +
Sbjct: 163 ALGAEAEVPKG----VYTLQDLREFGREKRWCPYFLARQTLQRANVVVYNYQYLLDPKVA 218
Query: 276 GAMEVDIK-GAILILDEAHNIEDIARDAGSVDIDEDVL---------------------- 312
G + + + AI++ DEAHNI+++ +A SV++ L
Sbjct: 219 GLVSREFEDNAIVVFDEAHNIDNVCIEALSVNLRSQTLDAAQRNITTLNTRITEVKKTDR 278
Query: 313 LKLQMELEQVCS-----------------VNPMIYQPLIEMTQDLVGWIERRKATLA-KR 354
+LQ E E++ S NP+I + +++ + + G I R + +A R
Sbjct: 279 KRLQDEYERLVSGLANQGAISRQRGEDLMANPVISEDVVQ--EVIPGNIRRAEHFVAIMR 336
Query: 355 EFQHFFSCWTGDKALRELQEANISRQCFPILLE-------CATKAIKEATDTESELPHLS 407
F F EL+ ++ + + ++ K +K D + L L
Sbjct: 337 RFVEFLR--------HELRAPSVVQTAPRMFIQKSEAGGGVDAKTLKFCYDRLTSL--LK 386
Query: 408 GMSVITLE--GLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNP 465
+ ++ E G SS+ F + G++ + + ++ Y +R P L L CL+
Sbjct: 387 TLEIVDTEEFGALSSVADFATLIGTYDQGFTIIMEPYDERYPHIPDP----VLQLACLDA 442
Query: 466 AVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTS------ 519
++ K V E S+ +TSGTLSP++ + L + P+V+ + LT
Sbjct: 443 SLAVKPVFEKYQSVFITSGTLSPIDLYPRLLKFR-------PNVMKSLMMTLTRKCLCPM 495
Query: 520 VISTGPDNYPLNASY---------------------KTADG-------YKLMEKLCNRWR 551
VI+ G D +++ + DG Y ME + ++W
Sbjct: 496 VITRGADQQHISSKFDMREDPNVIQNYGKVLVGLAQSIPDGIVAFFVSYSYMENIISKWH 555
Query: 552 ETGQWSRLNAKKPLFVEPKGGSQEDFE--IVLKHYYNSISQGSKCAVVRKKRVKREGNND 609
+TG + K +F+E +Q+ E + L +Y + + G
Sbjct: 556 DTGILREIMQHKLIFME----TQDVVETSLALDNYRRACNAG------------------ 593
Query: 610 LNTIESQENANKKGASFLAVCRGKIVVGIPF-------------PNINDIQVSLKKKYND 656
+GA FL+V RGK+ GI F P + L+ +
Sbjct: 594 ------------RGAVFLSVARGKVAEGIDFDRHYGRAVVMYGVPYQYTLSRILRARLE- 640
Query: 657 TYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWL 716
Y + ++ A R +Q IGR IR + DYG ++ D+R+ R+ + KW+
Sbjct: 641 -YLRETLQIKEQDFLTFDAIRQASQCIGRVIRSKADYGLMVFADKRYNSHDKRSKLPKWI 699
Query: 717 RKSIKQY---DSFDASLEGLKSFFRDV-----KGWVGKKMFN 750
+ + S D +L ++F R + G GK +F+
Sbjct: 700 SNHMTEELLNLSTDMALTVSRAFMRHMSQPFSAGEAGKTLFD 741
>gi|326480373|gb|EGE04383.1| DNA repair helicase RAD3 [Trichophyton equinum CBS 127.97]
Length = 770
Score = 114 bits (284), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 176/815 (21%), Positives = 337/815 (41%), Gaps = 131/815 (16%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+ + + + FPY + Y Q +MC + LD GHC +LE P+GTGK+++LL +
Sbjct: 3 FFIDDLPILFPYPRIYPEQYAYMCDLKKVLDAG---GHC--VLEMPSGTGKTITLLALIV 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNK 136
A+QQ+ +L S + + E L + + G T++ K
Sbjct: 58 AYQQHYPEHRKLIYCSRTMSEIEKALSELRALMKYRSQKLGVVEDFRALGLTSR-----K 112
Query: 137 NVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE 196
N+ + P++ R S AV+ +R T ++++K+ E+
Sbjct: 113 NL--CLHPSV---KREKSG-----------------AVVDARCRSLTAGFIKEKKEKGED 150
Query: 197 CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMA 256
+L + NL + N+ + G V ++ L+ G+ + C Y++AR M
Sbjct: 151 VELCIYHENLDLLEPSNL--------VPPG----VFTLDGLLKYGEQHKQCPYFSARRMM 198
Query: 257 DDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLK- 314
++ Y Y+++P I + ++ + +I++ DEAHNI+++ ++ S+D+ ED L K
Sbjct: 199 PYCNVIIYSYHYLLDPKIAERVSKELSRDSIIVFDEAHNIDNVCIESLSIDLTEDSLRKA 258
Query: 315 ------LQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKA 368
L+ +++ + S + L Q LV + + + + D
Sbjct: 259 SRGANNLERKIDDMKSSDA---DKLQSEYQKLVEGLREADEAREEEQLMA--NPVLPDDL 313
Query: 369 LRELQEANISR-QCFPILLECATKAIK---EATDTESELP-----HLSGMSVI------- 412
L+E NI R + F L+ + +K + T T SE P HL ++ I
Sbjct: 314 LKESVPGNIRRAEHFVAFLKRFIEYLKTRMKVTHTISETPLSFLSHLKDLTFIERKPLRF 373
Query: 413 ----------TLEGL-------FSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWT 455
TLE + + F + ++ + L L+ + + P
Sbjct: 374 CAERLTSLVRTLELVNIEDYQPLQEVATFATLAATYEIGFLLILEPFESDTATVPNP--- 430
Query: 456 HTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQ 515
L CL+ A+ K V + S+I+TSGTLSP+ + LG F L+ + + + +
Sbjct: 431 -ILHFTCLDAAIAIKPVFDRFSSVIITSGTLSPLEMYPKMLG--FDAALQESYSMTLARR 487
Query: 516 -VLTSVISTGPDNYPLNASYKTADGYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQ 574
L +++ G D +++S++ + ++ N E + R+ + P
Sbjct: 488 SFLPMIVTRGSDQAQISSSFQIRNDPGVVRNYGNMLLE---FCRITPDGVVVFFPSYLYM 544
Query: 575 EDFEIVLKHYYNSISQGSKC--AVVRKKRVKREGNNDLNTIESQENANKKGASF-LAVCR 631
E S+ QG +V K + E + + + E +G F R
Sbjct: 545 ESI--------ISMWQGMGILDSVWNYKLILVETPDSQESSLALETYLSEGIDFDHHYGR 596
Query: 632 GKIVVGIPFPNINDIQVSLKKKY-NDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHR 690
+ +G+PF + + ++ + YR + N++ A R Q +GR +R +
Sbjct: 597 TVLCIGVPFQYTESRILKARLEFLRENYR-----IRENDFLSFDALRHAAQCLGRVLRGK 651
Query: 691 FDYGAIILLDERFQEERNRAHISKWLRKSIKQYD---SFDASLEGLKSFFRDVKGWVGKK 747
DYG ++L D RFQ++RN+ + KW+ +++ + + S D ++ KSF K
Sbjct: 652 DDYGVMVLADRRFQKKRNQ--LPKWISQAMLESETNLSTDMAVATAKSFL--------KS 701
Query: 748 MFNGLENSDNDVDHVSSMDQCKEVTKQNTQELNKS 782
M + D + S++ K ++ QE+ K+
Sbjct: 702 MAQPFKAKDQEGISTWSLEDLKRHLEKQKQEVEKT 736
>gi|156083623|ref|XP_001609295.1| DNA excision repair helicase [Babesia bovis T2Bo]
gi|154796546|gb|EDO05727.1| DNA excision repair helicase [Babesia bovis]
Length = 822
Score = 114 bits (284), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 168/801 (20%), Positives = 321/801 (40%), Gaps = 137/801 (17%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+ + GI+V FPY Q Y QL ++ + STLD HA+LE PTGTGK+++L
Sbjct: 4 FWLDGIEVFFPYPQIYPEQLAYLRSLKSTLD-----AQGHAVLEMPTGTGKTVALFSLIT 58
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPES--------QPSTIPPSTNGQT 128
++Q +L + + P+ E L + + S+ ST +
Sbjct: 59 SYQLARPEMGRLIYCTRTIPEMEKSLLELKEVIKYRDAELEKDRVAMEASSTSDSTGEPS 118
Query: 129 AQVAMNNKNVKKKMTPT---IFYASRTHSQISQVISEYKKTAYR-VPMAVLASRKHYCTN 184
+Q +N + +T I Y + + + T+ + VP A +
Sbjct: 119 SQSGSSNTKNRHDLTSVWRRIEYEEGKPPSSDEHVLRFDGTSVQGVPTAPVVHHS----- 173
Query: 185 KYVRDKENIDEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLV-NVGQV 243
R +E D E +G C ++ + +V +P++ G + + +++ N
Sbjct: 174 ---RVEELPDIEHYTTMG----LCGHYEYLERV-WNPTMIPSGVYTLEGLKEYCSNFRHP 225
Query: 244 VRG-----CSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGA------------- 285
+ G C Y+AAR D A +V Y Y+++P + A ++
Sbjct: 226 LSGVSTPICPYFAARRALDIANVVVLNYQYLLDPKVSEAAFSNLYSTLPSSEKKEKDAPQ 285
Query: 286 -----------ILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELE-------------- 320
+++ DEAHNI+++ +A SV+I++D L + L+
Sbjct: 286 KPAENKAKLPIVVVFDEAHNIDNVCIEAMSVEINDDTLDEAYANLDILAGHVARQREKDE 345
Query: 321 -QVCSVNPMIYQPLIEMTQDLVGWIER-------RKATLAK-REFQHFFSCW-TGDKALR 370
Q+ + + +++ + D+ G++ +KA R +HF S T L+
Sbjct: 346 RQLLEEYRRLAERIVDSSIDIEGYMSPVLPDDVIQKAIPGNIRRAEHFISFLRTVVGYLK 405
Query: 371 ELQEANISRQCFPILL-----ECATKAIKEATDTESELPHLSGMSVITLEGLFSSLTY-- 423
+ + R P++ + A T + + L IT G SS+
Sbjct: 406 QYLKVQEPRSEGPLMFLHRFEQETGIAYSTLQYTYNRMKSLLNTLSITALGDLSSIQLVA 465
Query: 424 -FFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILT 482
F + G++ + + + ++ Y + G + + CL+ ++ + V E S+ILT
Sbjct: 466 DFCTLVGTYTTGFIVIVEPYPQ------GSLYEPVIQFSCLDASIAMQPVVENFQSVILT 519
Query: 483 SGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTADGYKL 542
SGT+SP+ + L P +D D + +++ G + ++ Y+ + +
Sbjct: 520 SGTISPLEMYPKILNFTPVLTQSLPMSLDRDC-LCPLIVAKGANQLQMSTRYELRNDVTV 578
Query: 543 MEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRV 602
+ E L P V S E+++ H+Y G +++ K +
Sbjct: 579 LRNYGTLLIE------LCKHIPDGVVCFFPSYAYMELIVSHWYEC---GIIASIMEHKLI 629
Query: 603 KREGNNDLNTIESQENANK-----KGASFLAVCRGK---------------IVVGIPFPN 642
E + + T + N K +GA FL++CRGK I++G+PF
Sbjct: 630 FMETKDVVTTTMALHNYRKACDVGRGALFLSICRGKVAEGIDFDRHYGRCVILIGVPF-- 687
Query: 643 INDIQVSLKK--KYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLD 700
Q +L + K + +K + NE+ A R Q +GR IR++ D+G ++ D
Sbjct: 688 ----QYTLSRVLKARLDFMRTKYGIMENEFLTFDAMRQAAQCVGRIIRNKSDFGLMVFAD 743
Query: 701 ERFQEERNRAHISKWLRKSIK 721
R+ R+ + W+ K+++
Sbjct: 744 SRYSRADKRSKLPPWILKNLE 764
>gi|71756165|ref|XP_828997.1| helicase [Trypanosoma brucei brucei strain 927/4 GUTat10.1]
gi|70834383|gb|EAN79885.1| helicase-like protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
Length = 1009
Score = 114 bits (284), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 113/373 (30%), Positives = 169/373 (45%), Gaps = 80/373 (21%)
Query: 29 YQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ--------- 79
++PY Q M V L+ R A +E PTG GK+L+LL S L +Q
Sbjct: 56 FEPYTVQREMMRTVHLALNSWPRHTPI-AAIEVPTGCGKTLALLSSVLRYQAGLEKHTPQ 114
Query: 80 --------QNCKLKNQLANIS----------HSKPDT---EAVTDPLANGGGFIPESQPS 118
+ C+ L ++S H K D+ E AN + S
Sbjct: 115 ELEQHFRLRRCRGPPVLPSLSRTEMSSRKWCHCKEDSKHSEESNGLKANTADGEEAWRVS 174
Query: 119 TI------PPSTNGQTAQVAMNNKNV----KKKMTP--TIFYASRTHSQISQVISEYKKT 166
++ PP NG+ +V + + K+ +P TIFY +RTH+Q+ Q + E +K
Sbjct: 175 SLFLRQFRPP--NGKRLRVELVTEGSLELRKQHQSPPCTIFYVTRTHAQLRQCVGELRKL 232
Query: 167 A--YRVPMAVLASRKHYCTNKYVR----------DKENIDEECKLLLGDRNLGCPQFKNV 214
R+ M +L SRK YC N++V + N+ E C D+ + Q + V
Sbjct: 233 KGLERLKMNILGSRKQYCINQHVLKACANKTLPIEGNNLGEVC-----DKLVSLGQCEAV 287
Query: 215 H-------KVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYS 267
H K HP L +G +V DIEDLV G + C YYAAR + A + F Y
Sbjct: 288 HGYGVLGSKAITHP-LSQGRSDKVWDIEDLVTEGVGMECCPYYAARDLVFFAHINFATYQ 346
Query: 268 YIINPVIRG--AMEVDIKG-AILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQVCS 324
Y+++P+IR ME +K +I+I DEAHN+ + +DA SV+ D L + E+E
Sbjct: 347 YLLDPLIRHECKMEAALKNHSIIIFDEAHNVPQVCQDALSVETSVDTLRLILNEIE---- 402
Query: 325 VNPMIYQPLIEMT 337
P+I QP + +
Sbjct: 403 --PLI-QPTVAVA 412
Score = 102 bits (255), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 141/298 (47%), Gaps = 17/298 (5%)
Query: 458 LSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGT--CLEAPHVIDVDLQ 515
+ + CL+ ++ F+ + + ++L SGTL+P + +LG+ + E HV Q
Sbjct: 611 VGIRCLDGSLAFQHILSTAHRVVLASGTLAPFHQLGRDLGIPPSSMATYEGLHVAQKH-Q 669
Query: 516 VLTSVISTGPDNYPLNASYKTADGYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQE 575
V++ D PL+ +Y + + +L + L L P +
Sbjct: 670 YRLGVLTHTVDATPLHCTYGSLKDPSFISQLVETLAMLVEKVELGGV--LVFMPNYTVMK 727
Query: 576 DFEIVLKHYYNSISQ----GSKCAVVRKKRVKREGNNDL-NTIESQENANKKG-ASFLAV 629
+ L Y ++ K + + ++ + D + ++S A +G A F +V
Sbjct: 728 TIGLQLISRYRDAARQMEGTPKSSRFPQVFLESQSAADFPSVLDSFRKATVRGPAVFASV 787
Query: 630 CRGKIVVGIPFPN-----INDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIG 684
R K+ GI F + + + V L+ + T ++ + SG EWY N A RA+NQA+G
Sbjct: 788 FRAKVSEGIDFADCMARLVVCVGVPLQPLKSWTVQAQRRY-SGEEWYVNDAVRAVNQALG 846
Query: 685 RCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFRDVKG 742
RCIRH D+GA++LLD+RF++ + +S+W R+ ++ + S + + L FFR +G
Sbjct: 847 RCIRHSRDFGAMVLLDDRFEQMNLQQSLSRWCREELRVHHSHASLADDLHEFFRTCRG 904
>gi|5022|emb|CAA43022.1| rad15 [Schizosaccharomyces pombe]
Length = 772
Score = 114 bits (284), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 173/806 (21%), Positives = 312/806 (38%), Gaps = 172/806 (21%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+++ + + FPY + Y Q +MC + +LD ALLE P+GTGK++SLL +
Sbjct: 3 FYIDDLPILFPYPRIYPEQYQYMCDLKHSLDAGGI-----ALLEMPSGTGKTISLLSLIV 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNK 136
++QQ+ +L S + + + L + +T+Q+
Sbjct: 58 SYQQHYPEHRKLIYCSRTMSEIDKALAELKRLMAY---------------RTSQLGYEEP 102
Query: 137 NVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKEN---I 193
+ +T SRK+ C + VR ++N +
Sbjct: 103 FLGLGLT---------------------------------SRKNLCLHPSVRREKNGNVV 129
Query: 194 DEECKLLLG-----DRNLG-----CPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQV 243
D C+ L R G C N+ + H + G V ++D+ G+
Sbjct: 130 DARCRSLTAGFVREQRLAGMDVPTCEFHDNLEDLEPHSLISNG----VWTLDDITEYGEK 185
Query: 244 VRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDA 302
C Y+ R M ++ Y Y+++P I + ++ K I++ DEAHNI+++ ++
Sbjct: 186 TTRCPYFTVRRMLPFCNVIIYSYHYLLDPKIAERVSRELSKDCIVVFDEAHNIDNVCIES 245
Query: 303 GSVDIDEDVLLKLQ---MELEQ-VCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQH 358
S+D+ E L K + LEQ V V + L + Q LV ++ A A E Q
Sbjct: 246 LSIDLTESSLRKASKSILSLEQKVNEVKQSDSKKLQDEYQKLVRGLQ--DANAANDEDQF 303
Query: 359 FFSCWTGDKALRELQEANISR--------QCFPILLECATKAIKEATDT-ESELPHLSGM 409
+ + L+E NI R + F L+ K + +T S L H+ +
Sbjct: 304 MANPVLPEDVLKEAVPGNIRRAEHFIAFLKRFVEYLKTRMKVLHVIAETPTSFLQHVKDI 363
Query: 410 SVITLEGL---------------------FSSL---TYFFSRNGSHVSDYQLALQKYIKR 445
+ I + L F SL F + ++ + L L+ +
Sbjct: 364 TFIDKKPLRFCAERLTSLVRALQISLVEDFHSLQQVVAFATLVATYERGFILILEPFETE 423
Query: 446 DSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLE 505
++ P L CL+ ++ K V E S+I+TSGTLSP++ + L QF T ++
Sbjct: 424 NATVPNP----ILRFSCLDASIAIKPVFERFRSVIITSGTLSPLDMYPKML--QFNTVMQ 477
Query: 506 APHVIDVDLQ-VLTSVISTGPDNYPLNASYK---------------------TADG---- 539
+ + + L V++ G D +++ ++ T DG
Sbjct: 478 ESYGMSLARNCFLPMVVTRGSDQVAISSKFEARNDPSVVRNYGNILVEFSKITPDGLVAF 537
Query: 540 ---YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAV 596
Y +E + + W+ G + K + VE + + L+ Y + + G +
Sbjct: 538 FPSYLYLESIVSSWQSMGILDEVWKYKLILVETPDPHET--TLALETYRAACTNGRGAVL 595
Query: 597 VRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKY-N 655
+ R K D + + G R I+ GIP+ + + ++
Sbjct: 596 LSVARGKVSEGVDFD--------HHYG-------RAVIMFGIPYQYTESRVLKARLEFLR 640
Query: 656 DTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKW 715
DTY+ + ++ A R Q +GR +R + D+G ++L D+R+ R + KW
Sbjct: 641 DTYQ-----IREADFLTFDAMRHAAQCLGRVLRGKDDHGIMVLADKRYGRSDKRTKLPKW 695
Query: 716 LRKSIKQYD---SFDASLEGLKSFFR 738
+++ I + S D SL K F R
Sbjct: 696 IQQYITEGATNLSTDMSLALAKKFLR 721
>gi|336468265|gb|EGO56428.1| hypothetical protein NEUTE1DRAFT_130389 [Neurospora tetrasperma
FGSC 2508]
gi|350289484|gb|EGZ70709.1| putative excision repair protein rhp3 [Neurospora tetrasperma FGSC
2509]
Length = 806
Score = 114 bits (284), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 166/806 (20%), Positives = 316/806 (39%), Gaps = 170/806 (21%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+++ + V FPY + Y Q +M + TLD G+C +LE P+GTGK+++LL +
Sbjct: 3 FNIDDLPVLFPYPRIYPEQYAYMVDLKKTLDAG---GNC--VLEMPSGTGKTVTLLSLIV 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNK 136
A+QQ + PE + T + + + +
Sbjct: 58 AYQQ------------------------------YYPEHRKLIYCSRTMSEIEKALVELR 87
Query: 137 NVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKEN---I 193
+ K F A R + E++ L SRK+ C + V+ +++ +
Sbjct: 88 ALMK------FRAERLGHE-----EEFRGLG-------LTSRKNLCLHPSVKREKSGAIV 129
Query: 194 DEECKLLL----------GDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQV 243
D C+ L G+ C N+ + H + G + ++ L+ G+
Sbjct: 130 DARCRSLTAGFVKEKREKGENVETCVYHDNLDLLEPHNLIPNG----IWTLDGLMRYGEE 185
Query: 244 VRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDA 302
+ C Y+ AR M ++ Y Y+++P I + D+ K I++ DEAHNI+++ ++
Sbjct: 186 KKQCPYFTARRMMQYCNVIIYSYHYLLDPKIAERVSKDLSKDCIVVFDEAHNIDNVCIES 245
Query: 303 GSVDIDEDVLLKLQMELEQV-CSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFS 361
S DI +D L++ + + ++ M ++ + +E K R+ F +
Sbjct: 246 LSTDITQDSLMRATRGAQNLEAKISEMKDSDQEKLQSEYEKLVEGLKGLDEGRQEDAFMA 305
Query: 362 CWT-GDKALRELQEANISR--------QCFPILLECATKAIKEATDT-ESELPHLSGMSV 411
T D L+E NI R + F L+ K + ++T S L HL +
Sbjct: 306 NPTLPDDLLKEAVPGNIRRAEHFVAFLRRFIEYLKTRMKVRQVISETPPSFLAHLKEYTF 365
Query: 412 ITLEGL------------------------FSSLTYFFSRNGSHVSDYQLALQKYIKRDS 447
I + L + F + ++ + L L+ Y +
Sbjct: 366 IEKKPLRFCAERLTSLVRTLELTNIEDYRPLQEVATFATLVATYEKGFLLILEPYESDTA 425
Query: 448 KNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAP 507
K P L CL+ A+ K V + S+I+TSGT+SP+ + L F T ++
Sbjct: 426 KTPNP----VLHFTCLDAAIAIKPVFDRFSSVIITSGTISPLEMYPKMLN--FETVVQES 479
Query: 508 HVIDVDLQ-VLTSVISTGPDNYPLNASYK---------------------TADG------ 539
+ + + + L +++ G D ++ S++ T DG
Sbjct: 480 YAMTLARRSFLPMIVTRGSDQASISTSFQVRNEPSVVRNYGNLLTEFARITPDGMVVFFP 539
Query: 540 -YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVR 598
Y ME + + W+ G + K + VE + + L+ Y + G ++
Sbjct: 540 SYLYMESIISMWQGMGILDEVWKHKLILVETPDAQETS--LALETYRTACCNGRGAILLC 597
Query: 599 KKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKY-NDT 657
R K D + ++ G R + +G+PF + + ++ +T
Sbjct: 598 VARGKVSEGIDFD--------HQYG-------RTVLCIGVPFQYTESRILKARLEFLRET 642
Query: 658 YRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLR 717
YR + N++ A R Q +GR +R + DYG ++L D RF + RA + KW+
Sbjct: 643 YR-----IRENDFLSFDAMRHAAQCLGRVLRGKDDYGVMVLADRRFM--KKRAQLPKWIN 695
Query: 718 KSIKQYD---SFDASLEGLKSFFRDV 740
++ + + S D ++ ++F + +
Sbjct: 696 QAFLEANTNLSTDMAVGNARAFLKQM 721
>gi|429962537|gb|ELA42081.1| hypothetical protein VICG_00930 [Vittaforma corneae ATCC 50505]
Length = 599
Score = 113 bits (283), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 128/284 (45%), Gaps = 61/284 (21%)
Query: 27 FPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCKLKN 86
F + Y SQ+ + VI+T+++ + A++ SPTGTGK+LSLLC+
Sbjct: 5 FSRKLYPSQIKLIQDVINTINQKK-----MAIVSSPTGTGKTLSLLCA------------ 47
Query: 87 QLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKKMTPTI 146
L N E + + L+ TN I
Sbjct: 48 -LTNFVKKSTQEEDLFELLSR----------------TN-----------------RTKI 73
Query: 147 FYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEECKLLLGDRNL 206
+Y SRTHSQ+SQVISE + YR +L SRK YC N V NID LL DR
Sbjct: 74 YYCSRTHSQLSQVISELRSCKYRYKSIILGSRKVYCVNNEVNKITNID-----LLNDR-- 126
Query: 207 GCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPY 266
C + + H ++ HE DIE+L G R C YY A++ + D ++V PY
Sbjct: 127 -CKEMIRDDSCKYHG--KEYYTHETLDIEELKACGIKERFCPYYHAKNRSADCEIVLLPY 183
Query: 267 SYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDED 310
+ + R ++++ +K I+++DEAHNI D S ++ D
Sbjct: 184 NLLFTAEGRKSLDISLKDKIVVVDEAHNIYDTVIQLNSAELSWD 227
Score = 54.7 bits (130), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 54/110 (49%), Gaps = 16/110 (14%)
Query: 629 VCRGKIVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIR 688
VCR +VVG+P+P +++ + K S ++ A + +NQ +GR IR
Sbjct: 501 VCRLLVVVGVPYPT-RSVEIMERAK------------SVKDYETLVAMKTVNQTVGRAIR 547
Query: 689 HRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
H+ DY AI+LLD R+ + R +S WL K F L + SF +
Sbjct: 548 HKDDYAAIVLLDCRYLALKER--LSPWLHAKTK-ICKFSEGLLRINSFLK 594
>gi|50306065|ref|XP_452994.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642127|emb|CAH01845.1| KLLA0C17776p [Kluyveromyces lactis]
Length = 778
Score = 113 bits (283), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 175/816 (21%), Positives = 317/816 (38%), Gaps = 191/816 (23%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+++ + V FPY + Y Q +MC + TLD +++LE P+GTGK++SLL T+
Sbjct: 3 FYIDDLPVLFPYPKIYPEQYQYMCDIKKTLD-----AGGNSILEMPSGTGKTVSLLSLTV 57
Query: 77 AWQQN-------CKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTA 129
A+Q + ++ I + + E++ D + GF+ + + +
Sbjct: 58 AYQMHYPEHRKIIYCSRTMSEIEKALVELESLMDYRSKELGFVEDFRGLGL--------- 108
Query: 130 QVAMNNKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRD 189
SR + + +S+ +K V+ + TN R
Sbjct: 109 -------------------TSRKNLCLHPRVSKERKG------NVVDEKCRRMTNGQARK 143
Query: 190 K--ENIDEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGC 247
K EN D +L C +N++ L G V E L+ + R C
Sbjct: 144 KKEENPDANVEL--------CDYHENMYNYDVADYLPPG----VFSFERLIRFCEEKRMC 191
Query: 248 SYYAARSMADDAQLVFCPYSYIINPVI--RGAMEVDIKGAILILDEAHNIEDIARDAGSV 305
Y+ R M ++ Y Y+++P I R + EV K AI+I DEAHNI+++ ++ S+
Sbjct: 192 PYFTVRRMISMCNIIIYSYHYLLDPKIAERVSKEVS-KDAIVIFDEAHNIDNVCIESLSL 250
Query: 306 DIDEDVLLK-------LQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQH 358
D+ +D+L K L ++E++ V+ Q L + + LV + + E
Sbjct: 251 DLTKDLLKKATKGANALDRKVEEMKKVDS---QKLQDEYEKLVHGLRASDILEPEEEPLV 307
Query: 359 FFSCWTGDKALRELQEANISRQC--------FPILLECATKAIKEATDT-ESELPHLSGM 409
+ D L+E NI R F L+ K + ++T S L HL +
Sbjct: 308 ETPVLSND-ILKEAIPGNIRRATHFISFLKRFIEYLKTRMKVLHVISETPNSFLLHLKQL 366
Query: 410 SVI-----------------TLE-------GLFSSLTYFFSRNGSHVSDYQLALQKYIKR 445
+ I TLE + F + ++ + L ++ Y
Sbjct: 367 TFIERKPLRFCSERLSLLVRTLEVEEVEEFNALKDIATFATLISTYEDGFLLIIEPYEIE 426
Query: 446 DSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLE 505
++ P + CL+ ++ K + E S+I+TSGT+SP++ + L F T L+
Sbjct: 427 NAAVPNP----IVRFTCLDASIAIKPIFERFSSVIITSGTISPLDMYPKMLN--FETVLQ 480
Query: 506 APHVIDVDLQ-VLTSVISTGPDNYPLNASYK---------------------TADG---- 539
+ + + + L +++ G D +++ ++ T DG
Sbjct: 481 QSYSMTLAKKSFLPMILTKGSDQVAISSRFEIRNDPSIVRNYGSMLVEFAKITPDGLVVF 540
Query: 540 ---YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAV 596
Y ME + + W+ G + K + VE + + L+ Y + S G
Sbjct: 541 FPSYLYMESIISMWQTMGILDEVWKYKLILVETPDAQET--ALALETYRKACSNG----- 593
Query: 597 VRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPN---INDIQVSLKKK 653
+GA L+V RGK+ GI F + + + + +
Sbjct: 594 -------------------------RGAILLSVARGKVSEGIDFDHQYGRTVLMIGIPFQ 628
Query: 654 YNDTYRSSKNL--------LSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQE 705
Y ++ L + N++ A R Q +GR +R + DYG ++L D RF
Sbjct: 629 YTESRILKARLEFLRENYQIRENDFLSFDAMRHAAQCLGRVLRGKDDYGVMVLADRRFA- 687
Query: 706 ERNRAHISKWLRKSIKQYD---SFDASLEGLKSFFR 738
R ++ + KW+ + + D S D ++ K F R
Sbjct: 688 -RKKSQLPKWIAQGLSDADMNLSTDMAIANTKQFLR 722
>gi|409045964|gb|EKM55444.1| hypothetical protein PHACADRAFT_256068 [Phanerochaete carnosa
HHB-10118-sp]
Length = 792
Score = 113 bits (283), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 171/816 (20%), Positives = 317/816 (38%), Gaps = 183/816 (22%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+++ + V FPY + Y Q +MC + TLD GHC +LE P+GTGK++SLL +
Sbjct: 3 FYIDDLPVIFPYDRIYPEQYSYMCDLKRTLDAG---GHC--VLEMPSGTGKTVSLLSLIV 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNK 136
++QQ + +L S + P+ E L
Sbjct: 58 SYQQFYPARRKLIYCSRTVPEIEKALAEL------------------------------- 86
Query: 137 NVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKEN---I 193
K++ + T Q ++ Y L SRK+ C + V ++ +
Sbjct: 87 ---KRLMEYRLSIAETEEQQAKERGFYGLG--------LTSRKNLCIHPEVSKEKKGRVV 135
Query: 194 DEECKLLL-------GDRNLG----CPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQ 242
D C+ L G N G C +N+ K+ + G + + D++ G+
Sbjct: 136 DARCRDLTNSAVCQKGRDNPGSVDLCDWHENLGKLEPGNLIPPG----IWTLADVLQYGR 191
Query: 243 VVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARD 301
C Y+ R M +V + Y+++P + + ++ K +I++ DEAHNI+++ +
Sbjct: 192 DNVVCPYFLVRRMMAFVDVVIYSFHYLLDPKVAEQVSKEMSKDSIVVFDEAHNIDNVCIE 251
Query: 302 AGSVDIDEDVL----------------------LKLQMELEQVCS-------------VN 326
+ S+D+ +L KLQ E ++ N
Sbjct: 252 SLSIDLTRPMLDSAARSVTRLGDKIEEIKRTDASKLQDEYAKLVEGLQEAATDEDSLVAN 311
Query: 327 PMIYQPL--------IEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRELQEAN-I 377
P++ + L I + V +++R L R T L+ L++ I
Sbjct: 312 PVLPEDLLTEAIPGNIRKAEHFVAFLKRFVEYLKTRMRVLHVVAETPLSFLQHLKDITYI 371
Query: 378 SRQCFPILLECATKAIKEATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQL 437
R+ P+ CA + ++ EL L S + F++L ++ + L
Sbjct: 372 ERR--PLRF-CAERL--QSLVRTLELNRLDEFSALQKVASFATLV------ATYEKGFLL 420
Query: 438 ALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELG 497
L+ + ++ P + T CL+P++ K V E S+++TSGT+SP++ + L
Sbjct: 421 ILEPFETDNATVPNPIFHFT----CLDPSIAIKTVFERFSSVVITSGTISPLDMYPKML- 475
Query: 498 VQFGTCLEAPHVIDVDLQ-VLTSVISTGPDNYPLNASYK--------------------- 535
QF ++ + + + L VI+ G D +++ ++
Sbjct: 476 -QFTPVIQESYSMTLTRNSFLPLVITRGSDQVAISSRFEVRNDPAVVRNFGSILIEYSKI 534
Query: 536 TADG-------YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSI 588
DG Y ME + W + G + + K +FVE ++ I L++Y +
Sbjct: 535 VPDGIVAFFPSYLYMESIVAAWNDMGILNEVWKYKLIFVETPDANET--SIALENYRRAC 592
Query: 589 SQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQV 648
G ++ R K D + + G R I+ G+P+ +
Sbjct: 593 DNGRGAVLLSVARGKVSEGIDFD--------HNYG-------RAVIMFGVPYQYTESRIL 637
Query: 649 SLKKKY-NDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEER 707
+ +Y DTYR + +E+ A R Q +GR +R + D+G ++ D+RF
Sbjct: 638 KARLEYLRDTYR-----IRESEFLGFDAMRNAAQCVGRVLRGKTDWGLMVFADKRFARAD 692
Query: 708 NRAHISKWLRKSIKQYD---SFDASLEGLKSFFRDV 740
RA + +W+ + I + S D ++ K F R +
Sbjct: 693 KRAKLPRWINQYITETASNLSTDMAITLSKLFMRTI 728
>gi|392350937|ref|XP_237570.6| PREDICTED: probable ATP-dependent RNA helicase DDX11, partial
[Rattus norvegicus]
Length = 954
Score = 113 bits (282), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 143/334 (42%), Gaps = 77/334 (23%)
Query: 457 TLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSEL----GVQFGTCLE--APHVI 510
+L LNPAV F V + ++++ GT+ P++ F +L GV+ +E HVI
Sbjct: 433 SLKFLLLNPAVHFAQVVKECRALVIAGGTMQPVSDFREQLLACSGVEASRVVEFSCGHVI 492
Query: 511 DVDLQVLTSVISTGPDNYPLNASYKTADGYKLMEK-------LCN--------------- 548
D +L +I +GP N L +Y+ + ++ME+ LCN
Sbjct: 493 PPD-NILPLIICSGPSNQQLEFTYQRRELPQMMEETGRILCNLCNVVPGGMVCFLPSYEY 551
Query: 549 ------RWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRV 602
W +TG +RL+ +K +F EPK SQ E VL Y I+ C
Sbjct: 552 LRQVHAHWDKTGLLARLSVRKKIFQEPKRASQ--VEQVLTAYSTCIA---SC-------- 598
Query: 603 KREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQ 647
S + GA L+V GK ++VG+P+PNI +
Sbjct: 599 ------------SHSEGHLTGALLLSVVGGKMSEGINFSDDLGRCVVMVGMPYPNIKSPE 646
Query: 648 VSLKKKYNDTY--RSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQE 705
+ K Y D R+ G N +A+NQ+IGR IRH+ D+ +I+LLD R+
Sbjct: 647 LQEKMAYLDQTIPRTHGQPPPGTVLIENLCMKAINQSIGRAIRHQKDFASIVLLDHRYAR 706
Query: 706 ERNRAHISKWLRKSIKQYDSFDASLEGLKSFFRD 739
A + W+R ++ +F + ++ F R+
Sbjct: 707 PSILAKLPAWIRDRVEVKATFGPAFAAMRKFHRE 740
Score = 82.4 bits (202), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 98/199 (49%), Gaps = 27/199 (13%)
Query: 146 IFYASRTHSQISQVISEYKKTAY--RVPMAVLASRKHYCTNKYVRDKENI---DEEC--- 197
I+Y SRTHSQ++Q + E +K+ + + L SR+ C N+ V+ ++ ++ C
Sbjct: 68 IYYCSRTHSQLAQFVREVQKSPFGKETRLVSLGSRQSLCVNEDVKSLGSVHLMNDRCVDM 127
Query: 198 ------KLLLGD---------RNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQ 242
K+ +G+ CP F N ++ L+ EV D+E LV +G+
Sbjct: 128 QRRKHEKMRIGEDKPKRRRQKMQASCP-FYNHEQME---LLRDEILLEVKDMEQLVALGK 183
Query: 243 VVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDA 302
+ C YY +R AQLV PY +++ R A + ++G ++I+DEAHN+ D +
Sbjct: 184 EAQACPYYGSRFAIPAAQLVVLPYPMLLHAATRQAAGIRLQGQVVIIDEAHNLIDTITNI 243
Query: 303 GSVDIDEDVLLKLQMELEQ 321
S +++ L + +L Q
Sbjct: 244 HSTEVNGSQLCQAHSQLLQ 262
>gi|242087259|ref|XP_002439462.1| hypothetical protein SORBIDRAFT_09g007185 [Sorghum bicolor]
gi|241944747|gb|EES17892.1| hypothetical protein SORBIDRAFT_09g007185 [Sorghum bicolor]
Length = 590
Score = 113 bits (282), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 138/626 (22%), Positives = 250/626 (39%), Gaps = 154/626 (24%)
Query: 222 SLQKGGCHEVH-----DIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRG 276
SLQK EV DIEDL +G+ + C YY +R M A LV PY ++ R
Sbjct: 6 SLQKEFRSEVSNQGALDIEDLARIGKKIGTCPYYGSRDMIRSADLVVLPYQSLLLKSARE 65
Query: 277 AMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQ--------VCSVNPM 328
++ +++K +++I+DEAHN+ D + + I L + L++ + + N
Sbjct: 66 SLGLNLKNSVVIIDEAHNLADSLTNMYNSKITSSQLKTVLSHLDEYLNRFHNVLGAANRR 125
Query: 329 IYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKAL--RELQEANISRQCFPI-- 384
Q L +T+ + + + K++ S T ++ L ++ NI + C +
Sbjct: 126 YIQTLTVLTRSFL------RVLINKQDGASNMSSMTINQFLFSLDIDNINIVKLCQFVKE 179
Query: 385 --LLECATKAIKEATDTESELP---HLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLAL 439
++ + + T +++ H G S+ L+ L + + N +D ++ +
Sbjct: 180 SNIIHKVSGYANKLTSIQNQFDIQLHDEGSSIACLQALVDFIRSLLNSN----NDGRIIV 235
Query: 440 QKYIKRDSKNPGGNWTHT-LSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSEL-- 496
K + GG L L +F +V + + ++IL GTL P+ L
Sbjct: 236 AK------QKLGGQPDEAYLKFVMLCAEKIFSEVTQDAYAVILAGGTLQPIEETRLRLCP 289
Query: 497 -----GVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTADGYKLMEKL----C 547
++F TC H++ + +L ++ GP + SY + ++E+L C
Sbjct: 290 SLPPTDIKFFTC---NHIVPPE-SILPIAVTRGPSGMTFDFSYNSRSSPSMIEELGRFIC 345
Query: 548 N------------------------RWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKH 583
N W G S+++ KK +F EP+ + D E VL
Sbjct: 346 NIITVVPEGVVMFFSSYDYERRVYDAWMTAGTISKISKKKHVFREPRNSA--DVEGVLNK 403
Query: 584 YYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKI--------- 634
Y +I SK + ++ GA LAV GKI
Sbjct: 404 YKETIESCSKIS---------------------QDTGVNGALLLAVVGGKISEGINFSNG 442
Query: 635 ------VVGIPFPNINDIQV--------------------SLKKKYND---------TYR 659
+VG+P+P+ +D+++ + +KY+D +R
Sbjct: 443 MGRCVIMVGLPYPSPSDVELIETIKHIESISSSFLVGDDKASSRKYDDECELQPGYDIFR 502
Query: 660 SSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHIS------ 713
K G E+Y N +A+NQ+IGR IRH DY A++L+D R+ + + + S
Sbjct: 503 --KCTRGGREYYENLCMKAVNQSIGRAIRHINDYAAMLLVDSRYAQTSSTKNFSCPTDKL 560
Query: 714 -KWLRKSIKQYDSFDASLEGLKSFFR 738
+W++ + ++ L FF+
Sbjct: 561 PQWIKARLSCAQNYGEVHRSLHQFFK 586
>gi|293350107|ref|XP_001070646.2| PREDICTED: probable ATP-dependent RNA helicase DDX11 [Rattus
norvegicus]
Length = 845
Score = 113 bits (282), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 143/334 (42%), Gaps = 77/334 (23%)
Query: 457 TLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSEL----GVQFGTCLE--APHVI 510
+L LNPAV F V + ++++ GT+ P++ F +L GV+ +E HVI
Sbjct: 531 SLKFLLLNPAVHFAQVVKECRALVIAGGTMQPVSDFREQLLACSGVEASRVVEFSCGHVI 590
Query: 511 DVDLQVLTSVISTGPDNYPLNASYKTADGYKLMEK-------LCN--------------- 548
D +L +I +GP N L +Y+ + ++ME+ LCN
Sbjct: 591 PPD-NILPLIICSGPSNQQLEFTYQRRELPQMMEETGRILCNLCNVVPGGMVCFLPSYEY 649
Query: 549 ------RWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRV 602
W +TG +RL+ +K +F EPK SQ E VL Y I+ C
Sbjct: 650 LRQVHAHWDKTGLLARLSVRKKIFQEPKRASQ--VEQVLTAYSTCIA---SC-------- 696
Query: 603 KREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQ 647
S + GA L+V GK ++VG+P+PNI +
Sbjct: 697 ------------SHSEGHLTGALLLSVVGGKMSEGINFSDDLGRCVVMVGMPYPNIKSPE 744
Query: 648 VSLKKKYNDTY--RSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQE 705
+ K Y D R+ G N +A+NQ+IGR IRH+ D+ +I+LLD R+
Sbjct: 745 LQEKMAYLDQTIPRTHGQPPPGTVLIENLCMKAINQSIGRAIRHQKDFASIVLLDHRYAR 804
Query: 706 ERNRAHISKWLRKSIKQYDSFDASLEGLKSFFRD 739
A + W+R ++ +F + ++ F R+
Sbjct: 805 PSILAKLPAWIRDRVEVKATFGPAFAAMRKFHRE 838
Score = 95.5 bits (236), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 95/360 (26%), Positives = 155/360 (43%), Gaps = 71/360 (19%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+GGI FP+ PY Q FM + L+ A + G + ESPTGTGKSLSL+C L+W
Sbjct: 8 MGGIHFPFPFPPYPIQKDFMAELYKVLE-AGKIG----IFESPTGTGKSLSLICGALSWL 62
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVK 139
++ + K A P + P ++G + S P T + V+
Sbjct: 63 RDFEQKKLQAEAGLLAP----ASGPTSSGRNSVLSSSSCQEPSDTLRPAGDPDWVTEFVQ 118
Query: 140 KK-----------------------------------MTPTIFYASRTHSQISQVISEYK 164
KK +I+Y SRTHSQ++Q + E +
Sbjct: 119 KKEERDLVERLREEQLRRRKREERLQEVCQDGRRRFAAKRSIYYCSRTHSQLAQFVREVQ 178
Query: 165 KTAY--RVPMAVLASRKHYCTNKYVRDKENI---DEEC---------KLLLGD------- 203
K+ + + L SR+ C N+ V+ ++ ++ C K+ +G+
Sbjct: 179 KSPFGKETRLVSLGSRQSLCVNEDVKSLGSVHLMNDRCVDMQRRKHKKMRIGEDKPKRRR 238
Query: 204 --RNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQL 261
CP F N ++ L+ EV D+E LV +G+ + C YY +R AQL
Sbjct: 239 QKMQASCP-FYNHEQME---LLRDEILLEVKDMEQLVALGKEAQACPYYGSRFAIPAAQL 294
Query: 262 VFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQ 321
V PY +++ R A + ++G ++I+DEAHN+ D + S +++ L + +L Q
Sbjct: 295 VVLPYPMLLHAATRQAAGIRLQGQVVIIDEAHNLIDTITNIHSTEVNGSQLCQAHSQLLQ 354
>gi|255072415|ref|XP_002499882.1| predicted protein [Micromonas sp. RCC299]
gi|226515144|gb|ACO61140.1| predicted protein [Micromonas sp. RCC299]
Length = 797
Score = 113 bits (282), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 166/736 (22%), Positives = 290/736 (39%), Gaps = 173/736 (23%)
Query: 146 IFYASRTHSQISQVISEYKKT-AYRVP--------MAV-LASRKHYCTNKYVRD---KEN 192
+ Y +RT ++ +V++E + AYR MA+ L+SRK+ C + V D +E+
Sbjct: 69 LIYCTRTVPEMEKVLAELRNLQAYREKHVGKASQIMALGLSSRKNMCIHPKVADEGSRES 128
Query: 193 IDEECKLLLG----DRNLG---------------CPQFKNVHKVRGHPSLQKGGCHEVHD 233
+D C+ L D+++ C F++ K + L G V+
Sbjct: 129 VDANCRRLTASWVRDKHMAALANEEEAPENAPELCEFFEDYEKEGPNAILPPG----VYT 184
Query: 234 IEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEA 292
+ DL + G+ C Y+ AR M A +V Y Y+++P + + ++ + +++ DEA
Sbjct: 185 LADLRDFGRKKGWCPYFLARHMISFANVVVYNYQYLLDPKVANMVSRELERECVVVFDEA 244
Query: 293 HNIEDIARDAGSVDIDEDVL-------LKLQMELEQVCSVNPMIYQPLIEMTQDLVGWIE 345
HNI+++ +A SV++ + L +L +E V + + Q L E LV +
Sbjct: 245 HNIDNVCIEALSVNLRQQTLDGASRNIAQLTQRIEHVKAHDE---QRLREEYTRLVNGLA 301
Query: 346 RRKATLAKREFQHFFSCWTGDKALRELQEANISR-QCFPILLECATKAIKE---ATDTES 401
++ R Q + + LRE NI R + F L + +K+ E
Sbjct: 302 QQGVLDRARSDQLIANPVISEDILREAVPGNIRRAEHFIAFLRRFVEYLKQRMRGGSVEQ 361
Query: 402 ELP-----HLSGMSVI-----------------TLEGL----FSSLTY---FFSRNGSHV 432
E P HL + I TLE + FS+++ F + G++
Sbjct: 362 ETPIAFLAHLQQTAAIDGKTLKFCYDRITSLLKTLEVVDTEDFSAISLICDFATLVGTYE 421
Query: 433 SDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSF 492
+ L L+ Y +R P L CL+ + V + S+ +TSGTLSP+N +
Sbjct: 422 KGFALILEPYDERYPNIPDP----VFQLTCLDASYAIAPVFDKFNSVFITSGTLSPINLY 477
Query: 493 SSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTAD-------------- 538
LG + C A + + VI+ G D ++ + D
Sbjct: 478 PQLLGFK-PVCSAALDMTLTRECLCPMVITRGADQQMVSTKFDMRDDPGVIQNYGRVLID 536
Query: 539 --------------GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHY 584
Y ME++ ++W ETG ++ +K +F+E + + + L +Y
Sbjct: 537 LCSCVPDGIVAFFVSYSYMEQIISKWHETGVLQQVMRRKLVFLETQDVVET--SLALDNY 594
Query: 585 YNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNIN 644
+ + G +GA FL+V RGKI GI F
Sbjct: 595 RRACNCG------------------------------RGAVFLSVARGKIAEGIDFDRHY 624
Query: 645 DIQVSLKKKYNDTYRSS-KNLLSGNEWYCNQAF-------------RALNQAIGRCIRHR 690
V + Y Y+ + +L Y + F R Q +GR IR +
Sbjct: 625 GRAVIM---YGVPYQYTLSRILRARLEYLRETFQIKEADFLSFDAVRQAAQCVGRVIRSK 681
Query: 691 FDYGAIILLDERFQEERNRAHISKWLRKSIKQYD---SFDASLEGLKSFFRDV------K 741
DYG ++ D+R+ R + KW+ + + S D ++ + F RD+
Sbjct: 682 ADYGLMVFCDKRYNSHDKRGKLPKWITSHLHEQQLNLSTDMAVAIARQFMRDMAQPYDRA 741
Query: 742 GWVGKKMFNGLENSDN 757
G +GK + + +NS N
Sbjct: 742 GQMGKSLLD--QNSVN 755
>gi|351706985|gb|EHB09904.1| TFIIH basal transcription factor complex helicase subunit, partial
[Heterocephalus glaber]
Length = 759
Score = 113 bits (282), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 184/803 (22%), Positives = 305/803 (37%), Gaps = 165/803 (20%)
Query: 20 VGGIQVEFPYQ-PYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
V G+ V FPY Y Q +M + TLD H +LE P+GTGK++SLL +A+
Sbjct: 4 VDGLLVYFPYDYIYPEQFSYMLELKRTLD-----AKGHGVLEMPSGTGKTVSLLALIMAY 58
Query: 79 QQNCKLK-NQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKN 137
Q L+ +L S + P+ E V + L F + + +P +++ N
Sbjct: 59 QWAYPLEVTKLIYCSRTVPEIEKVIEELRKLLNFYEKQEGEKLPFLGLALSSR---KNLC 115
Query: 138 VKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEEC 197
+ ++TP F + + H T YVR + D
Sbjct: 116 IHPEVTPLRFGKD------------------------VDGKCHSLTASYVRAQYQQDASM 151
Query: 198 KLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMAD 257
C ++ L G +++++DL +GQ C Y+ AR
Sbjct: 152 P--------HCRFYEEFDAHGRQVPLPTG----IYNLDDLKALGQRQGWCPYFLARYSIL 199
Query: 258 DAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQ 316
A Y Y+++P I + ++ + A+++ DEAHNI+++ D+ SV++ L + Q
Sbjct: 200 HANEGVYTYHYLLDPKIADLVSKELARKAVVVFDEAHNIDNVCIDSMSVNLTRRTLDRCQ 259
Query: 317 MELE----QVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALREL 372
L+ V + Q L + + LV + R+A+ A+ H + D+ L+E
Sbjct: 260 ANLDTLQKTVLRIKETDEQRLRDEYRRLVEGL--REASAARETDAHLANPVLPDEVLQEA 317
Query: 373 QEANI-SRQCFPILLECATKAIK-----EATDTESELPHLSGMS---------------- 410
+I + + F L + IK + ES LS ++
Sbjct: 318 VPGSIRTAEHFLGFLRRLLEFIKWRLRVQHVVQESPPAFLSSLAQRVCIQRKPLRFCAER 377
Query: 411 ----VITLE----GLFSSLTYFFSRNGSHVSDYQLALQKYIK-RDSKNPGGNWTHTLSLW 461
+ TLE FS LT + + VS Y I+ D + P L
Sbjct: 378 LRSLLHTLEIADLADFSPLT-LLANFATLVSTYAKGFTIIIEPFDDRTPTIA-NPILHFS 435
Query: 462 CLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELG---VQFGT--------CLEAPHVI 510
C++ ++ K V E S+I+TSGTLSP++ + L V T CL P +I
Sbjct: 436 CMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMATFTMTLARVCL-CPMII 494
Query: 511 DV--DLQVLTSVISTGPD--------NYPLNASYKTADG-------YKLMEKLCNRWRET 553
D ++S T D N L S DG Y+ ME W E
Sbjct: 495 GRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFTSYQYMESTVASWYEQ 554
Query: 554 GQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTI 613
G + K LF+E + G++ + L+ Y + G
Sbjct: 555 GILENIQRNKLLFIETQDGAETS--VALEKYQEACENG---------------------- 590
Query: 614 ESQENANKKGASFLAVCRGKIVVGIPF-------------PNINDIQVSLKKKYNDTYRS 660
+G L+V RGK+ GI F P + LK + Y
Sbjct: 591 --------RGPILLSVARGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLE--YLR 640
Query: 661 SKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSI 720
+ + N++ A R Q +GR IR + DYG ++ D+RF R + +W+++ +
Sbjct: 641 DQFQIRENDFLTFDAMRHAAQCVGRAIRGKTDYGLMVFADKRFARADKRGKLPRWIQEHL 700
Query: 721 KQYD---SFDASLEGLKSFFRDV 740
+ + D ++ K F R +
Sbjct: 701 TDANLNLTVDEGVQVAKYFLRQM 723
>gi|345317478|ref|XP_001517598.2| PREDICTED: DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11
[Ornithorhynchus anatinus]
Length = 899
Score = 113 bits (282), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 133/323 (41%), Gaps = 76/323 (23%)
Query: 464 NPAVVFKDVAELSLSIILTSGTLSPMNSFSSEL------GVQFGTCLEAPHVIDVDLQVL 517
NPAV F V ++I+ GT+ P+ F +L G + HVI D +L
Sbjct: 601 NPAVHFAQVVRECRAVIIAGGTMQPVADFREQLLACAGVGAERVVEFACGHVIPPD-NIL 659
Query: 518 TSVISTGPDNYPLNASYKTADGYKLMEK-------LCN---------------------R 549
V+ +GP N PL +Y+ + ++M++ LCN R
Sbjct: 660 PLVLCSGPSNQPLEFTYQKRELPQMMDETGRILFNLCNVVPGGVVCFFPSYEYQRQVQAR 719
Query: 550 WRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNND 609
W +G +RL KK +F EPK SQ E VL Y I C
Sbjct: 720 WEHSGLLARLGIKKKVFQEPKKASQ--VEKVLADYSKCIQH---C--------------- 759
Query: 610 LNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKKY 654
SQ + GA L+V GK ++VG+P+PNI ++ K Y
Sbjct: 760 -----SQPGSAMTGALLLSVVGGKMSEGINFSDDLGRCVVMVGMPYPNIKSPELQEKMAY 814
Query: 655 ND-TYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHIS 713
D T G N RA+NQ+IGR IRH+ D+ +I+LLD+R+ A +
Sbjct: 815 LDQTLPRGPGQAPGKALIENTCMRAVNQSIGRAIRHQHDFASIVLLDQRYARPAILAKMP 874
Query: 714 KWLRKSIKQYDSFDASLEGLKSF 736
W+R ++ +F + L+ F
Sbjct: 875 GWIRGRVEVKAAFGPAFAMLRKF 897
Score = 76.6 bits (187), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 88/201 (43%), Gaps = 46/201 (22%)
Query: 146 IFYASRTHSQISQVISEYKKTAY--RVPMAVLASRKHYCTNKYVRDKENIDEECKLLLGD 203
I+Y SRTHSQ++Q + E +++ + +A L SR+ C N+ VR ++ L+ D
Sbjct: 215 IYYCSRTHSQLAQFVHEVQRSPFGKETRLASLGSRQSLCVNEDVRRLGSMQ-----LIND 269
Query: 204 RNLGCPQFKNVHKVRGHPS------------------------------------LQKGG 227
R C + + + R +P L+
Sbjct: 270 R---CMELQRNKQARKNPEEEEKEEQAEETGKARKKRKRESRATCPFYSYEQMQLLRDKV 326
Query: 228 CHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAIL 287
EV DIE LV +GQ C YY +R AQLV PY +++ R A + ++ ++
Sbjct: 327 LVEVKDIEQLVALGQESHACPYYGSRYAIPAAQLVVLPYQMLLHSATRRAAGIQLQDQVV 386
Query: 288 ILDEAHNIEDIARDAGSVDID 308
I+DEAHN+ D S +++
Sbjct: 387 IIDEAHNLIDTITAIHSAEVN 407
Score = 52.4 bits (124), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 5/67 (7%)
Query: 21 GGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQ 80
G + FP+ PY Q FM + L+ + + ESPTGTGKSLSL+C L+W +
Sbjct: 9 GRVHFPFPFTPYPIQESFMAELYRVLEAGK-----IGIFESPTGTGKSLSLICGALSWLR 63
Query: 81 NCKLKNQ 87
+ + K +
Sbjct: 64 DFETKKK 70
>gi|363728123|ref|XP_416375.3| PREDICTED: DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 [Gallus
gallus]
Length = 941
Score = 112 bits (281), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 95/332 (28%), Positives = 145/332 (43%), Gaps = 76/332 (22%)
Query: 457 TLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSEL----GVQFGTCLE--APHVI 510
+L LNPAV F V + ++I+ GT+ P+ F +L GV +E HVI
Sbjct: 632 SLKFLLLNPAVHFAKVVKECRAVIIAGGTMQPVADFREQLLSYAGVDPARIVEFSCGHVI 691
Query: 511 DVDLQVLTSVISTGPDNYPLNASYKTADGYKLMEK-------LCN--------------- 548
+ +L ++ +GP N L +Y+T D ++M++ LCN
Sbjct: 692 PPE-NILPIILCSGPSNQQLEFTYQTRDLPQMMDETGRILCNLCNVVPGGVVCFFPSYDY 750
Query: 549 ------RWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRV 602
W +TG +RL KK +F EPK +Q E VL Y +KC +
Sbjct: 751 EKQVYAHWEKTGLLTRLATKKKIFQEPKKANQ--VEQVLAEY-------AKC-------I 794
Query: 603 KREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQ 647
KR G Q GA L+V GK I+VG+P+PNI +
Sbjct: 795 KRCG---------QAGGQMTGALLLSVVGGKMSEGINFSDDLGRCVIMVGMPYPNIKSPE 845
Query: 648 VSLKKKYND-TYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEE 706
+ K + D T S + N +A+NQ+IGR IRH+ DY +I+LLD R+
Sbjct: 846 LQEKMTWLDKTMPRSASQAPSRVLIENLCMKAVNQSIGRAIRHQKDYASILLLDHRYARP 905
Query: 707 RNRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
+ +W+R+ I+ +F ++ L+ F R
Sbjct: 906 AILNKLPQWIRERIQVKPAFGSAFAELRKFHR 937
Score = 80.9 bits (198), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 86/178 (48%), Gaps = 34/178 (19%)
Query: 146 IFYASRTHSQISQVISEYKKTAY--RVPMAVLASRKHYCTNKYVRDKENIDEECKLLLGD 203
I+Y SRTHSQ+SQ + E +K+ + + L SR++ C N+ VR + L+ D
Sbjct: 263 IYYCSRTHSQLSQFVHEVQKSPFGKDTRLVSLGSRQNLCVNEEVRRLGALQ-----LIND 317
Query: 204 RNLGCPQF-KNVHKVRGHPSLQ-------KGGCH----------------EVHDIEDLVN 239
R C + KN H+ + ++ + C EV DIE LV
Sbjct: 318 R---CTEMQKNKHEKKSDAEVEGKKRRVSRTVCPFYSYEQMQFLRDEVLVEVKDIEQLVT 374
Query: 240 VGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIED 297
+G+ + C YY +R AQLV PY +++ R A + +K ++I+DEAHN+ D
Sbjct: 375 LGKETKACPYYGSRYAIPAAQLVVLPYQMLLHEATRSAAGIILKDQVVIIDEAHNLID 432
Score = 63.5 bits (153), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 53/98 (54%), Gaps = 7/98 (7%)
Query: 27 FPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCKLKN 86
FPY PY Q FM + + L+ A R G + ESPTGTGKSLSL+C L+W Q+ + K
Sbjct: 52 FPYTPYRIQEQFMAALYAALE-AGRIG----IFESPTGTGKSLSLICGALSWLQDFEKKK 106
Query: 87 QLANISHSKPDTEAVTD--PLANGGGFIPESQPSTIPP 122
Q P+ + PLA+GG P S+ ++ P
Sbjct: 107 QQEEARLLAPEGSGQEEKQPLASGGPACPNSRDASGEP 144
>gi|347365666|gb|AEO89688.1| ercc2 [Danio rerio]
Length = 760
Score = 112 bits (281), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 184/829 (22%), Positives = 315/829 (37%), Gaps = 217/829 (26%)
Query: 20 VGGIQVEFPYQ-PYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
+ G+ V FPY Y Q +M + TLD H +LE P+GTGK++SLL +A+
Sbjct: 5 IDGLLVYFPYDYIYPEQYSYMLELKRTLD-----AKGHGVLEMPSGTGKTISLLSLIVAY 59
Query: 79 QQNCKLK-NQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKN 137
Q+ L+ +L S + P+ E V + L
Sbjct: 60 QKTYPLEVTKLVYCSRTVPEIEKVVEEL-------------------------------- 87
Query: 138 VKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYV---RDKENID 194
+K M +Y+ +T V +++ A L+SRK+ C + V R + +D
Sbjct: 88 -RKLMD---YYSKQT-----GVKNDFLALA-------LSSRKNLCIHPEVSSLRFGKEVD 131
Query: 195 EECKLLLG---------DRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVR 245
+C L + N QF G G + + D++D G+
Sbjct: 132 GKCHSLTASYIRAQHQSNPNQPVCQFYEEFDNVGRQVPIPPGIYNLDDLKDF---GRRKG 188
Query: 246 GCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGS 304
C Y+ AR A +V Y Y+++P I + ++ K ++++ DEAHNI+++ D+ S
Sbjct: 189 WCPYFLARYALLHANIVVYSYHYLLDPKIADLVSKELAKKSVVVFDEAHNIDNVCIDSMS 248
Query: 305 VDIDEDVLLKLQMELEQVCSVNPMI-----------YQPLIE------------------ 335
V+I L + Q +E + + I Y+ L+E
Sbjct: 249 VNITRRTLDRCQTNVETLQNTISRIKETDAAKLREEYRRLVEGLKEANVARETDIYLSNP 308
Query: 336 ----------------MTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRELQE-ANIS 378
+ VG+++R L R H + + L+++ E I
Sbjct: 309 VLPDEILQEAVPGSIRTAEHFVGFMKRFLEYLKARLRIHHVVQESAPQFLKDIFEKVCID 368
Query: 379 RQCFPILLECATKAIKEATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLA 438
R+ P+ CA + ++ T E+ ++ S ITL F++L +S+ + +
Sbjct: 369 RK--PLRF-CAER-LRSLLRT-LEIADIADFSPITLISHFATLVSTYSKG------FTII 417
Query: 439 LQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSP---------- 488
++ + + K P L C++P++ K V ++I+TSGTLSP
Sbjct: 418 IEPF---EDKTPTIA-NPVLHFSCMDPSIAIKPVFGRFQTVIITSGTLSPLDIYPRILDF 473
Query: 489 ----MNSFSSELGVQFGTCLEAPHVIDV--DLQVLTSVISTGPD--------NYPLNASY 534
M SF+ L TCL P ++ D +TS T D N L S
Sbjct: 474 RPVTMASFTMTLA---RTCL-CPLIVGRGNDQVAMTSKFETREDFAVIRNYGNLLLEMSA 529
Query: 535 KTADG-------YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNS 587
DG Y ME + W E G + K +F+E + ++ + L+ Y +
Sbjct: 530 IVPDGIVAFFTSYMYMENIVASWYEQGILENIQRNKLIFIETQDAAETS--MALEKYQEA 587
Query: 588 ISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPF------- 640
G +GA L+V RGK+ GI F
Sbjct: 588 CENG------------------------------RGAILLSVARGKVSEGIDFVHHFGRA 617
Query: 641 ------PNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYG 694
P + LK + Y + + N++ A R Q +GR IR + DYG
Sbjct: 618 VIMFGVPYVYTQSRILKARLE--YLRDQFQIRENDFLTFDAMRHAAQCVGRAIRGKTDYG 675
Query: 695 AIILLDERFQEERNRAHISKWLRKSIKQYD---SFDASLEGLKSFFRDV 740
+I D+R+ R + +W+++ + + D +++ K F R +
Sbjct: 676 LMIFADKRYARADKRGKLPRWIQEHLTDGSLNLTIDETVQLSKHFLRQM 724
>gi|393212456|gb|EJC97956.1| DNA repair helicase [Fomitiporia mediterranea MF3/22]
Length = 863
Score = 112 bits (281), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/340 (27%), Positives = 151/340 (44%), Gaps = 68/340 (20%)
Query: 451 GGNWTHTLSLWC--------------LNPAVVFKDVAELSLSIILTSGTLSPMNSFSSEL 496
G N T TL L+ LNPA F ++ + + +IL GT+SP+ + +L
Sbjct: 534 GTNDTATLHLFADKSSPDEKRIRYQHLNPATHFDEIVQNARCVILAGGTMSPIPDVTLQL 593
Query: 497 GVQFGTCLE-------APHVIDVDLQVLTSVISTGPDNYPLNASYKTAD----------- 538
F T E HVI + + V+ GP L YK D
Sbjct: 594 ---FPTIPEDRLSVFSCGHVIPHE-NLKCVVLGKGPLGRDLEFKYKARDDQSLTDELGQC 649
Query: 539 -----------------GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVL 581
Y ++++ +RW G R+ KK +F EP S+ E VL
Sbjct: 650 LSNLVSISPNGIVVFFPSYTFLDRVKSRWTSNGILDRIQKKKQVFFEPHESSE--VENVL 707
Query: 582 KHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFP 641
+ Y + +Q + +G L + ++ + A LA R ++VGIP+P
Sbjct: 708 RDYSIACTQVTTGPT--------KGALLLAVVGAKLSEGLNFADELA--RAVVLVGIPYP 757
Query: 642 NINDIQVSLKKKYND---TYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIIL 698
N+ ++ + KY D R + +GNE Y N A RA+NQ+IGR IRH+ D+ A+IL
Sbjct: 758 NLGSPELRERMKYLDKKMVGRGNNTGRAGNELYENLAMRAVNQSIGRAIRHQNDWAALIL 817
Query: 699 LDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
+D R++ ++ + + W+R++I SF +++ L F+R
Sbjct: 818 IDNRYKSQKVQQKLPGWIRQNITTPQSFGQAVKELGEFYR 857
Score = 97.1 bits (240), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 107/205 (52%), Gaps = 26/205 (12%)
Query: 146 IFYASRTHSQISQVISEYKK-----------------------TAYRVPMAV-LASRKHY 181
+F+ASRTHSQ+SQVI E +K ++ +P +V LASR H
Sbjct: 207 VFFASRTHSQLSQVIHELEKLKPDGFNREIEEDSRISPRNGNGSSSPLPRSVSLASRTHL 266
Query: 182 CTNKYVRDK-ENIDEECK-LLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVN 239
C N+ +R + ++DE C+ LL G + CP + + ++ DIEDLV+
Sbjct: 267 CINEKLRARTADLDEGCRELLQGRQEDRCPYLPQLGEEDRLHDIRDRILASPKDIEDLVS 326
Query: 240 VGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIA 299
G+ +R C Y+ +RS A+LV PY+ +++ R A+E+D+ ++I+DEAHN+ +
Sbjct: 327 TGKELRLCPYFGSRSAVSSAELVTLPYNLLLHSRSRQALEIDLTDQVVIVDEAHNLIETL 386
Query: 300 RDAGSVDIDEDVLLKLQMELEQVCS 324
+V++ +L + +L + S
Sbjct: 387 LQLHTVELSTSLLRRAIQQLAKYFS 411
>gi|340381258|ref|XP_003389138.1| PREDICTED: regulator of telomere elongation helicase 1-like
[Amphimedon queenslandica]
Length = 300
Score = 112 bits (281), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 100/189 (52%), Gaps = 23/189 (12%)
Query: 614 ESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKKYNDTY 658
E +A+K G +F VCRGK I+ G+P+P + +V LK +Y
Sbjct: 6 EKIGSADKVGGAFFGVCRGKVSEGLDFADNNGRAVIITGLPYPPFAEPKVQLKMEYLKDA 65
Query: 659 RSSKN---LLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKW 715
RS+ N L++ +WY QA RA+NQAIGR IRH+ DYGAIIL DERF R + + W
Sbjct: 66 RSNFNRTELITDKQWYNQQATRAVNQAIGRVIRHKNDYGAIILCDERFAYSRGQDDLPLW 125
Query: 716 LRKSIKQYDSFDASLEGLKSFFRDVKGWVGKKMFNGLENSDNDV--DHVSSM-DQCKEVT 772
LR +++YD F + L SFF+ + G + ++NS DV D+ S + + V
Sbjct: 126 LRPQLQKYDKFGPAQRDLTSFFKTAQNKYGHLV--SIKNSLPDVKPDYTSGIVGGARGVV 183
Query: 773 KQNTQELNK 781
K N + K
Sbjct: 184 KLNPDAIFK 192
>gi|145495232|ref|XP_001433609.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124400728|emb|CAK66212.1| unnamed protein product [Paramecium tetraurelia]
Length = 702
Score = 112 bits (279), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 175/795 (22%), Positives = 318/795 (40%), Gaps = 184/795 (23%)
Query: 18 YHVGGIQVEFPYQ-PYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+ + I+V FPY+ Y QL +M + TLD H +LE PTGTGK++ S L
Sbjct: 3 FIIDDIEVIFPYKFLYKEQLEYMQALKQTLDE-----KGHGILEMPTGTGKTV----SLL 53
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNK 136
A+ LA ++ +P+TI
Sbjct: 54 AFI--------LAYLAQ----------------------RPNTI---------------- 67
Query: 137 NVKKKM---TPTIFYASRTHSQISQVISEYKKTAYR--VPMAVLASRKHYCTN-KYVRDK 190
KK+ T T+ +T ++ V+ K L+SR++ C N V K
Sbjct: 68 ---KKLIYCTRTVVEMEKTLEEVRLVMKARKAEGLNDNFTAVGLSSRRNLCINPDVVNQK 124
Query: 191 ENIDEECKLLLGD-----RNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVR 245
+ +D EC+ + ++ C + N K ++V+ + DL G
Sbjct: 125 DRVDSECRKRTAEWVKRGQSEICIFYDNFEK--SAKDFIANLPNDVYSLSDLRKNGGFSM 182
Query: 246 GCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVD-IKGAILILDEAHNIEDIARDAGS 304
C YY AR M A +V Y Y+I+P I + D IK ++++ DEAHNI+D+ +A +
Sbjct: 183 QCPYYTAREMVKKANIVVYNYLYLIDPGISSLLSKDYIKESVVVFDEAHNIDDVCIEAYT 242
Query: 305 VDIDEDVLLK----LQMELEQVCSVNPMIYQPLIEMTQDLVGWIERR-KATLAK------ 353
V +++ +L + L++ Q+ S I L E + L+ +E++ + L +
Sbjct: 243 VRLNKPILAEAINNLKVVETQIQSETNEIQNRLNEEYKKLIKNLEKKPEGELNQLVIPGQ 302
Query: 354 -REFQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSV- 411
R+ ++F D R +Q+ F I+ + K K + + + G +
Sbjct: 303 IRKARNFI-----DFMKRIIQKHQKHLMLFYIIPKALLKRYKRKGNLDIDSLKQCGERLN 357
Query: 412 ITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKD 471
+ L L + T F R S V+ + + +Q+ + ++L C + ++ K+
Sbjct: 358 LLLNTLQIAETDKF-RPLSTVAQFVIRIQRTLNE----------KLMTLACFDSSLAMKN 406
Query: 472 VAELSLSIILTSGTLSPMNSF----------SSELGVQFGTCLEAPHVIDV--DLQVLTS 519
+ S+ILTSGT+SP++ + + + ++ P ++ + D LTS
Sbjct: 407 IFASFQSVILTSGTMSPIDIYPKILDFKPVVAKSIDIELTRNSIQPIIVTMSEDGTELTS 466
Query: 520 V--------ISTGPDNYPLNASYKTADG-------YKLMEKLCNRWRETGQWSRLNAKKP 564
+S N+ L S DG Y ME+ +W++ +++ K
Sbjct: 467 EFTFRNNEDVSRNYGNFLLELSENVPDGLIVFMPSYSRMEEWARQWQKDKYLEQISKNKV 526
Query: 565 LFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGA 624
L +E K ++ + Q KC V +GA
Sbjct: 527 LLIESKDVNETS---------QKLQQYRKCCDV-----------------------GRGA 554
Query: 625 SFLAVCRGKI---------------VVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSGNE 669
+ ++ RGKI V+G P N D + + K+ + K ++ N+
Sbjct: 555 ALFSIARGKIAEGIDFEGHYGRCVAVIGFPALNSKDTLILERCKFLE----EKFKITKND 610
Query: 670 WYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDAS 729
+ A R Q +GR +R + DYG +I+ D+RF ++ + + +W+ K + Q + +
Sbjct: 611 FIEFDAMRQTCQCLGRVLRGKQDYGIMIMADKRFAQKSKLSKMPRWIYKQLDQSRCLNIT 670
Query: 730 LEG----LKSFFRDV 740
E ++ FFR +
Sbjct: 671 SETAITVVRDFFRQM 685
>gi|85001257|ref|XP_955347.1| chl1 protein [Theileria annulata strain Ankara]
gi|65303493|emb|CAI75871.1| chl1 protein, putative [Theileria annulata]
Length = 829
Score = 112 bits (279), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 146/329 (44%), Gaps = 64/329 (19%)
Query: 23 IQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNC 82
++ E P++PY +QL+FM D + L ESPTG+GK+LS+LCS L W +N
Sbjct: 10 VEFELPFEPYPNQLIFMKDAYKCFDESS-----FGLFESPTGSGKTLSILCSALTWIKNN 64
Query: 83 KLKNQLANI-------------------SHSKPDTE---------------AVTDPLANG 108
+ K + ++ +H K E +++ L N
Sbjct: 65 RSKTMMCDLGLEPSNDEKVPKWVSEISLNHKKKMIEDIIKSEAVKLEDLRKKISERLDNS 124
Query: 109 GG--FIPESQPSTIPPSTNGQTAQ----VAMNNKNVKKKMTPTIFYASRTHSQISQVISE 162
G I E+ + T +++ V N N + I SRT SQ++Q + E
Sbjct: 125 DGKLRIRENYKRMLSEQTAPDSSELHNSVFQENNNFENPNRTQIIICSRTFSQLNQYVKE 184
Query: 163 YK---KTAYRVPMAVLASRKHYCTNKYVRDK----ENIDEECKLLLGDRNLGCPQFKNVH 215
+K K V +++ + R H C N ++ K E +++EC R C N
Sbjct: 185 FKRLNKINKNVRLSIGSGRSHVCINNMIKSKCKSPEELNDEC------RRSKCEYRSNTT 238
Query: 216 KVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIR 275
+ ++ C+ + D+EDLV++G+ C YY+ +A +V PY +I+ +R
Sbjct: 239 DL-----IEITTCYPL-DLEDLVSLGKESGCCPYYSNLKTLTNADIVLAPYITVISESLR 292
Query: 276 GAMEVDIKGAILILDEAHNIEDIARDAGS 304
++ + IK ILI DE HN+ D ++ S
Sbjct: 293 ESLGLRIKDNILIFDEGHNLTDAITESRS 321
Score = 62.4 bits (150), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 118/282 (41%), Gaps = 57/282 (20%)
Query: 476 SLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYK 535
S S+++ SGTLSP+ F S AP +V I P +PLN
Sbjct: 483 SRSVVIMSGTLSPIEEFLSL----------APSKTEV-------FIHKSPPVFPLNRFLA 525
Query: 536 TADGYKLM-----EKLCNRWRETGQWSRLNAKKPLF-----VEPKG----GSQEDFEIVL 581
T + + ++L + LN L + P G S + +
Sbjct: 526 TINHIFVCLDERGDELVFDYSRRENLEELNFLCNLLELLSEIVPGGIVCFFSSYSYLDLF 585
Query: 582 KHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGK-------- 633
+Y+ I S V+ +K V +E N E ++ ++GA LAV G
Sbjct: 586 YNYF--IKSSSNKKVLTRKDVFKEQKNINIFPEYSKSCFERGAVLLAVFGGNQSEGVDFS 643
Query: 634 -------IVVGIPFPNINDIQVSLKKKYN--------DTYRSSKNLLSGNEWYCNQAFRA 678
++VG+P+P ++I++SLK+ Y D S NE ++
Sbjct: 644 DDLARLVLLVGLPYPP-DNIKLSLKRDYYNKKSLESCDASVSENFSKLSNEQRTLLCYKT 702
Query: 679 LNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSI 720
+NQ IGR +RHR DY A++LLD R++ +++ ++RKSI
Sbjct: 703 VNQCIGRAMRHRNDYSAVLLLDGRYKGRDASKYLTGYVRKSI 744
>gi|282848158|ref|NP_001164296.1| DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11 [Xenopus (Silurana)
tropicalis]
gi|197246717|gb|AAI68601.1| Unknown (protein for MGC:185780) [Xenopus (Silurana) tropicalis]
Length = 895
Score = 112 bits (279), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 102/381 (26%), Positives = 160/381 (41%), Gaps = 91/381 (23%)
Query: 411 VITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFK 470
++ +EG S+LT N + L +Q + + S L LNPAV F
Sbjct: 549 LMQIEGFLSALT-----NANQDGRVILHMQGTVAQSS----------LKFLMLNPAVHFA 593
Query: 471 DVAELSLSIILTSGTLSPMNSFSSELGVQFG------TCLEAPHVIDVDLQVLTSVISTG 524
+V + S+I+ GT+ P++ F +L + G T HVI + +L V+ +G
Sbjct: 594 EVLKECRSVIIAGGTMQPVSDFKQQLLISAGLSPERITEFSCGHVIPAE-NILPIVLCSG 652
Query: 525 PDNYPLNASYKTADGYKLMEK-------LCN---------------------RWRETGQW 556
P N L +Y+ D ++M++ LCN W ++G
Sbjct: 653 PTNQQLEFTYQKRDLPEMMDETGRILTNLCNFVPGGLVCFFPSYEYQKRIQEHWEKSGLL 712
Query: 557 SRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQ 616
RL KK +F EPK +Q D VL Y I C SQ
Sbjct: 713 KRLALKKKIFQEPKRANQVD--QVLVEYSKCIK---NC--------------------SQ 747
Query: 617 ENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKKYND-TYRS 660
+ GA +V GK ++VG+P+PNI ++ K Y D T
Sbjct: 748 SGGAQNGALLFSVVGGKMSEGINFSDDLGRCIVMVGMPYPNIRSPELQEKMSYLDKTLPK 807
Query: 661 SKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSI 720
++ + +G N +A+NQ+IGR IRHR DY +I+LLD R+ + +W+R S
Sbjct: 808 TEGVSAGRVLIENLCMKAVNQSIGRAIRHRGDYASIVLLDHRYSRPAILGKLPQWIRSST 867
Query: 721 KQYDSFDASLEGLKSFFRDVK 741
+ +F A+ ++ FF+ K
Sbjct: 868 QVKPNFGAAFATIRKFFQQKK 888
Score = 82.8 bits (203), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 85/174 (48%), Gaps = 27/174 (15%)
Query: 146 IFYASRTHSQISQVISEYKKTAY--RVPMAVLASRKHYCTNKYVRDKENIDEECKLLLGD 203
I+Y SRTHSQ+SQ + E +K+ + + + L SR++ C N VR N+ L+ D
Sbjct: 213 IYYCSRTHSQLSQFVHEVQKSPFGKQTRLVSLGSRQNMCVNDDVRRLGNVQ-----LIND 267
Query: 204 RNLGCP----QFKNVHKVRGHPSLQKGGCH----------------EVHDIEDLVNVGQV 243
R + + KN R + C EV DIE LV++ +
Sbjct: 268 RCMEMQRNKHEKKNKEPERKKRQESRAACPFYSYEQMQFLRDETLVEVKDIEQLVSLARE 327
Query: 244 VRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIED 297
V+ C YY++R AQ+V PY +++ R A + +K ++I+DEAHN+ D
Sbjct: 328 VKACPYYSSRYAIPTAQVVVLPYQMLLHESSRKASGIKLKDQVVIIDEAHNLID 381
Score = 54.3 bits (129), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 36/61 (59%), Gaps = 5/61 (8%)
Query: 27 FPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCKLKN 86
FPY+PY Q FM ++ L+ + + ESPTGTGKSLSL+C L W Q+ + K
Sbjct: 15 FPYEPYPIQEQFMEKLYQALEAGKV-----GIFESPTGTGKSLSLICGALTWLQDFETKK 69
Query: 87 Q 87
+
Sbjct: 70 R 70
>gi|71413162|ref|XP_808733.1| helicase-like protein [Trypanosoma cruzi strain CL Brener]
gi|70872997|gb|EAN86882.1| helicase-like protein, putative [Trypanosoma cruzi]
Length = 956
Score = 112 bits (279), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 100/355 (28%), Positives = 159/355 (44%), Gaps = 55/355 (15%)
Query: 23 IQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNC 82
+ + P++PY Q M + + L + A +E PTG GK+L+LL S L +Q
Sbjct: 11 VAYDMPFEPYPVQRGMMHTITNCLQSSSPILPV-AAVEVPTGCGKTLALLSSVLRYQATL 69
Query: 83 -KLKNQ----------LANISHSKPDTEAVTDPLANGGGFIPESQPSTIPP--------- 122
KL Q + S P + + LA G S+ IP
Sbjct: 70 EKLTPQELEQHMRYRRWRPAATSLPKSLLAEETLAGSGRSKSNSKGKRIPDDAVDGEEKW 129
Query: 123 -----------STNGQTAQVAMNNK--NVKKKMTP---TIFYASRTHSQISQVISEYKKT 166
+ N + +V M+ +++++ P ++FY +RTHSQ+ Q + E +K
Sbjct: 130 RVPTEFFKQFRANNSKRLRVEMDGTPWSLRRQHEPPSCSVFYVTRTHSQVRQAVGELRKL 189
Query: 167 --AYRVPMAVLASRKHYCTNKYVR----------DKENIDEECKLL--LGDRNLGCPQFK 212
+R+ M +L SR+ YC N V + N+ E C L LG C
Sbjct: 190 HGLHRLKMNILGSRERYCINSTVLKARANNTLPVEGNNLGEICDKLVSLGQCEAVCNYGV 249
Query: 213 NVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINP 272
+ HP L +G +V D+EDLV G + C YYA R + A + F Y Y+++P
Sbjct: 250 LGSRAISHP-LHQGRLEKVWDMEDLVAEGVATQSCPYYATRELVFFAHVNFATYQYLLDP 308
Query: 273 VIRG--AMEVDIKG-AILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQVCS 324
+IR ME +K +I+I DEAHN+ + +DA S++ D L + E+E + +
Sbjct: 309 LIRHECKMEAALKNHSIIIFDEAHNVPSVCQDALSLETTLDNLRLVVSEIEPLIT 363
Score = 107 bits (267), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 142/320 (44%), Gaps = 62/320 (19%)
Query: 450 PGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFG--TCLEAP 507
P + T+ + CL+ ++ F + ++ ++L SGTL+P + +LG+ E
Sbjct: 545 PPPSLRRTVGIRCLDGSLAFHHLLAVTHRVVLASGTLAPFHQLGQDLGISPSDMATYEGL 604
Query: 508 HVIDVDLQVLTSVISTGPDNYPLNASYKTADGYKLMEKLCNRWRETGQWSRLNAKKPLFV 567
H+ V Q SV++ D L+ +Y+ +++L + E + RL
Sbjct: 605 HIAGVH-QYRISVLTHMMDGARLHCNYENFRDASFIDRLVSVIFEFVKQVRL-------- 655
Query: 568 EPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENA-------- 619
GG + L +Y GS+ + R+ E +L ++A
Sbjct: 656 ---GGVL----VFLPNYVVMRMVGSRLS----SRICDETGRELRIFIEPKDAMAFSSILD 704
Query: 620 ------NKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKKYNDTY 658
+ A FL+VCR K I VGIP +N V +++Y
Sbjct: 705 TFRVVTRRSTAVFLSVCRAKVGEGIDFADNMARLVICVGIPLRPLNSWVVEAQRRY---- 760
Query: 659 RSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRK 718
SG EWY A RA+NQA+GRC+R+R DYGA++LLD+RF+ + +SKW
Sbjct: 761 -------SGEEWYVIDAIRAVNQALGRCLRNRRDYGAMLLLDDRFERGAFQKRLSKWCAA 813
Query: 719 SIKQYDSFDASLEGLKSFFR 738
S+K + + + L+ L +F+R
Sbjct: 814 SLKVHHTPASVLKELSTFYR 833
>gi|340376021|ref|XP_003386532.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit-like [Amphimedon queenslandica]
Length = 754
Score = 112 bits (279), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 181/828 (21%), Positives = 312/828 (37%), Gaps = 218/828 (26%)
Query: 20 VGGIQVEFPYQ-PYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
+ G+ V FPY+ Y Q +M + TLD GHC +LE P GTGK++SLL +A+
Sbjct: 5 IDGLLVIFPYEYVYPEQYTYMLDLKRTLDA---KGHC--VLEMPCGTGKTVSLLALIIAY 59
Query: 79 QQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNV 138
+++H P I S Q AM
Sbjct: 60 -----------HMAH-------------------PHHIQKLIYCSRTVQEINKAM----- 84
Query: 139 KKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAV---LASRKHYCTNKYV---RDKEN 192
S++ +++ YK P + L+SRK+ C + + ++ +
Sbjct: 85 ---------------SELKRLLDAYKSEFGSTPNVLGVALSSRKNLCIHPMIAGNKEGKL 129
Query: 193 IDEECKLLL---------GDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQV 243
+D EC L D++ QF V+G K G V+D++DL ++GQ
Sbjct: 130 VDTECYKLTASFVREKHKADKSTPVCQFFEEFDVKGRVDPLKPG---VYDMDDLKSLGQT 186
Query: 244 VRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKG----AILILDEAHNIEDIA 299
C YY AR A ++ Y Y+++P I E+ KG ++++ DEAHNI+++
Sbjct: 187 KGWCPYYLARYTLGHATVIMYSYHYLLDPKI---AEIVSKGLPQQSVVVFDEAHNIDNVC 243
Query: 300 RDAGSVDIDEDVLLK-------LQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLA 352
++ S+ I L K LQ +L ++ + L + Q LV + R+A
Sbjct: 244 IESMSITIGRKTLEKCTANINNLQAKLRELGE------ERLRQEYQRLVEGL--RRAREE 295
Query: 353 KREFQHFFSCWTGDKALRELQEANISR-QCFPILLECATKAIKE---ATDTESELP---- 404
+ + D L+E N+ R + F + ++ + +K A SE P
Sbjct: 296 RENDIQLANPVLPDDVLQEALPGNMRRGEHFLLFMKRFAEYLKSRLLARHVVSETPKYFL 355
Query: 405 -------------------------------HLSGMSVITLEGLFSSLTYFFSRNGSHVS 433
LS S IT F++L ++
Sbjct: 356 QNIYSTVCIDRKPLRFCSERLHFMLQTLQLLELSDYSAITKVANFATLV------STYTE 409
Query: 434 DYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFS 493
+ L ++ + D++ P + L C++ + K V + S+ILTS T+SP++ +
Sbjct: 410 GFSLIIEPF---DNRAP-TIFNPILHFSCMDAGIAIKPVFDHYTSVILTSATISPLDMYP 465
Query: 494 SELGVQ------FGTCLEAPHVIDV------DLQVLTSVISTGPD--------NYPLNAS 533
L Q +G L P + + D +T+ D N + S
Sbjct: 466 RLLRFQPALLSSYGISLARPCICPIIVARGNDQVSITTKFEERGDTAIIRNYGNVVVELS 525
Query: 534 YKTADG-------YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYN 586
DG Y+ ME+ + W + G S++ K +FVE ++ + +
Sbjct: 526 SVIPDGIVAFFPSYEYMEQTVHEWVDQGLMSKIQRNKLVFVETVDNAEMNMAL------- 578
Query: 587 SISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNIND- 645
NN E N +GA L+V RGK+ G+ F +
Sbjct: 579 --------------------NNYRKACE-----NGRGALLLSVVRGKVSEGVDFDHHYGR 613
Query: 646 --IQVSLKKKYNDTYRSSKNL--------LSGNEWYCNQAFRALNQAIGRCIRHRFDYGA 695
I + + Y + L + N++ A R Q IGR +R + DYG
Sbjct: 614 AVIMIGIPYVYTQSRILKARLEFLRDNFQIRENDFLTFDAMRNSAQCIGRALRGKTDYGI 673
Query: 696 IILLDERFQEERNRAHISKWLRKSIKQYD---SFDASLEGLKSFFRDV 740
++ D+R+ + + KW+++ + S + S+ K F R +
Sbjct: 674 MVFADKRYGRSDKKGKLPKWIQEHLSDAVCSLSIEESVHICKRFLRQM 721
>gi|428173412|gb|EKX42314.1| hypothetical protein GUITHDRAFT_141266 [Guillardia theta CCMP2712]
Length = 864
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 171/692 (24%), Positives = 264/692 (38%), Gaps = 134/692 (19%)
Query: 146 IFYASRTHSQISQVISEYKKTAY--RVPMAVLASRKHYCTN------------------- 184
+ Y SRTHSQ+SQ ++E K+T + + LASRK C N
Sbjct: 196 VIYCSRTHSQLSQFMNEVKRTQWGKDLKAVSLASRKGMCINPKVSSLKSSTRINAACLDL 255
Query: 185 -KYVRDKE-NI-DEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVG 241
K V D E NI D L + CP + ++ L+ V DIED+V G
Sbjct: 256 QKGVEDTESNIEDAPSALKAKKKKSNCPFYDQDRQL----DLRDMILARVQDIEDIVENG 311
Query: 242 QVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARD 301
+ V+ C Y Y IR A V I L+ + +
Sbjct: 312 KKVQCCPY------------------YASRAAIRAAELVTIPYTSLVHKATREALGLKLE 353
Query: 302 AGSVDIDEDVLLKLQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFS 361
V IDE L +E + + Y + + ++ER L+ + ++
Sbjct: 354 GNVVIIDEAHNL---IEAVTTTHSSTLSYSAITLLKSLFSDYLERFCTRLSAKNAENVRL 410
Query: 362 CWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVITLEGLFSSL 421
K L + + S+ L+ + K + M+ I F L
Sbjct: 411 IILVLKKLDQYMIDSESKGSEKGSLKKTSGEGKPVVGKTVSVAEFCIMAGIDNVNFFQLL 470
Query: 422 TYFFSRNGSHVSD-----YQLALQKYIKR---DSKNPGGNWTHTLSL--WCLNPAVVFKD 471
YF + S + Y+ L +Y ++ D ++ T LSL LN + FK+
Sbjct: 471 RYF---DKSKILQKLHGFYEKRLAEYHEKAGFDGEDELDEATGKLSLSYQLLNASTHFKE 527
Query: 472 VAELSLSIILTSGTLSPMNSFSSEL--GVQ---FGTCLEAPHVIDVDLQVLTSVISTGPD 526
+ + + S++L GT+ PM + +L +Q F T L HVI + +L +STGP
Sbjct: 528 ILQQAHSVVLAGGTMQPMAEYVQQLMPSIQPSRFRT-LSVGHVIPKE-NILPLTVSTGPT 585
Query: 527 NYPLNASYKT---------------------ADG-------YKLMEKLCNRWRETGQWSR 558
+ + T DG Y E+L W G +
Sbjct: 586 GLKFDFRHGTRSDPTQKSEIGRLIVNICGLTPDGIVVFLPSYSYEEELWTYWTTEGLVDK 645
Query: 559 LNAKKPLFVEPKGGSQEDFEIVLKHYYNSI-SQGSKCAVVRKKRVKREGNNDLNTIESQE 617
+ KK +F EP+ S + E VL+ Y I +QG++ + + LN + +
Sbjct: 646 IAKKKKIFREPR--SSGEVEAVLRQYEECIRTQGTENTSPKDSSCMVD-TRILNRVTDRF 702
Query: 618 NANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKKYNDTY---- 658
GA L V GK IVVG+PF N D ++ K KY ++
Sbjct: 703 PVT--GAILLCVVGGKLSEGINFSDELGRCVIVVGLPFANRGDPRLLEKIKYVESLPPVT 760
Query: 659 -------RSSKNLL---SGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERN 708
+SS L +G +Y N +A+NQ IGR IRH DY AI+L+D R++
Sbjct: 761 ELVGEDSKSSPTLTGAKAGQAYYQNMCMKAVNQCIGRAIRHIADYAAILLVDSRYEGSNV 820
Query: 709 RAHISKWLRKSIKQYD--SFDASLEGLKSFFR 738
R I+ W+R + SF + L FF+
Sbjct: 821 RCKITSWIRDKLTADSPTSFGPCYQALAKFFK 852
Score = 50.4 bits (119), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
+G + +FP+ PY Q+ M V L DG + ESPTGTGKS+SL+CS+L W
Sbjct: 1 MGIEEFKFPFSPYTVQVQLMTAVYGAL----CDGAV-GIFESPTGTGKSMSLICSSLRW 54
>gi|403309188|ref|XP_003945007.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8-like [Saimiri boliviensis boliviensis]
Length = 903
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 147/319 (46%), Gaps = 47/319 (14%)
Query: 457 TLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSEL----GVQFGTCLE--APHVI 510
+L LNPAV F V + ++++ GT+ P++ F +L GV+ +E HVI
Sbjct: 591 SLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPVSDFRQQLLACAGVEPERVVEFSCGHVI 650
Query: 511 DVDLQVLTSVISTGPDNYPLNASYKTADGYKLMEK----LCN------------------ 548
D +L VI +G N PL +++ + ++M++ LCN
Sbjct: 651 PPD-NILPLVICSGISNQPLEFTFQKRELPQMMDEAGRILCNLCGVVPGGVVCFFPSYEY 709
Query: 549 ------RWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRV 602
W + G RL A+K +F EPK S E VL Y I QG C ++R
Sbjct: 710 LRQVHTHWEKGGLLDRLAARKKIFQEPK--STHQVEQVLLAYSRCI-QG--CG---QERG 761
Query: 603 KREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYNDTY--RS 660
+ G L+ + + + + L C ++VG+PFPNI ++ K Y D R+
Sbjct: 762 RVTGALLLSVVGGKMSEGINFSDNLGRC--VVMVGMPFPNIRSPELQEKMAYLDQTLPRA 819
Query: 661 SKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSI 720
G N +A+NQ+IGR IRH+ D+ +I+LLD+R+ A + W+R +
Sbjct: 820 PGQAPPGKALVENLCMKAVNQSIGRAIRHQRDFASIVLLDQRYARPPVLAKLPAWIRARV 879
Query: 721 KQYDSFDASLEGLKSFFRD 739
+ +F ++ ++ F R+
Sbjct: 880 EVKAAFGPAIAAVQKFHRE 898
Score = 85.1 bits (209), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 95/200 (47%), Gaps = 28/200 (14%)
Query: 146 IFYASRTHSQISQVISEYKKTAY--RVPMAVLASRKHYCTNKYVRDKENI---------- 193
++Y SRTHSQ++Q + E KK+ + V + L SR+ C N+ V+ ++
Sbjct: 229 VYYCSRTHSQLAQFVHEVKKSPFGKDVRLVSLGSRQSLCVNEDVKSLGSVQLINDRCVDM 288
Query: 194 ------------DEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVG 241
+E+ K ++ CP F N ++ L+ EV DIE L+ +G
Sbjct: 289 QRSRHGKKKGAEEEKPKRRRQEKQAACP-FYNHEQM---DLLRDEALAEVKDIEQLLALG 344
Query: 242 QVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARD 301
+ R C YY +R AQLV PY +++ R A + ++ ++I+DEAHN+ D
Sbjct: 345 KEARACPYYGSRLAIPAAQLVVLPYQMLLHAATRKAAGIRLQDQVVIIDEAHNLIDTITG 404
Query: 302 AGSVDIDEDVLLKLQMELEQ 321
SV++ L + +L Q
Sbjct: 405 MHSVEVSGSQLCQAHSQLLQ 424
Score = 57.8 bits (138), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 41/68 (60%), Gaps = 5/68 (7%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
VGGI FP+ PY Q FM + L+ A + G + ESPTGTGKSLSL+C L+W
Sbjct: 8 VGGIHFPFPFTPYSIQKDFMAELYRVLE-AGKIG----IFESPTGTGKSLSLICGALSWL 62
Query: 80 QNCKLKNQ 87
++ + K +
Sbjct: 63 RDFEQKKR 70
>gi|406605469|emb|CCH43113.1| DNA excision repair protein [Wickerhamomyces ciferrii]
Length = 781
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 162/748 (21%), Positives = 295/748 (39%), Gaps = 168/748 (22%)
Query: 146 IFYASRTHSQISQVISE-YKKTAYRVPMAV---------LASRKHYCTNKYVRDKEN--- 192
I Y SRT S+I + + E + YR L SRK+ C + V ++
Sbjct: 69 IVYCSRTMSEIEKALIELHNLMTYRAKELGYVEDFRGLGLTSRKNLCLHPTVSKEKKGSI 128
Query: 193 IDEECKLL---LGDRNLGCPQFKNVHKVRGHPSLQKGGCHE-----VHDIEDLVNVGQVV 244
+DE+C+ + L R + + +NV H +L + V+ + L N +
Sbjct: 129 VDEKCRRMTSGLAKRKIESGETENVDLCEFHENLYELEPDNLVPPGVYSFDSLTNYCKDQ 188
Query: 245 RGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAG 303
+ C Y+ R M ++ Y Y+++P I + ++ K +I+I DEAHNI+++ ++
Sbjct: 189 KTCPYFTVRRMIPFCNIIIYSYHYLLDPKISERVSKELSKDSIIIFDEAHNIDNVCIESL 248
Query: 304 SVDIDEDVLLK-------LQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREF 356
S+D++ DVL K L +E+V + + L + + LV + A + E
Sbjct: 249 SLDLNNDVLKKASKGANSLSKRIEEVKKTDS---KKLQDEYEKLVSGLS--AADIINNEQ 303
Query: 357 QHFFSCWTGDKALRELQEANISR--------QCFPILLECATKAIKEATDT-ESELPHLS 407
Q + + L+E NI R + F L+ K + ++T S L H+
Sbjct: 304 QMMETPVLSEDLLKEAIPGNIRRAEHFVSFLKRFIEYLKTRMKVLHVISETPTSFLQHVK 363
Query: 408 GMSVI-----------------TLE-------GLFSSLTYFFSRNGSHVSDYQLALQKYI 443
++ I TLE + F + ++ + L L+ Y
Sbjct: 364 QLTFIERKPLRFCSERLSLLVRTLEITDVEDYNALKDVATFATLVSTYEQGFALILEPYE 423
Query: 444 KRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTC 503
++ P L CL+ ++ K + E S+I+TSGT+SP++ + L F T
Sbjct: 424 TENATVPNP----ILRFTCLDASIAIKPIFERFSSVIITSGTISPLDMYPRMLN--FETV 477
Query: 504 LEAPHVIDVDLQ-VLTSVISTGPDNYPLNASYK---------------------TADG-- 539
++ + + + + L V++ G D +++ ++ T DG
Sbjct: 478 IQESYSMTLAKRSFLPLVVTKGSDQVAISSRFEIRNDPSIVRNYGSLLIEFSKITPDGMV 537
Query: 540 -----YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKC 594
Y ME + + W+ G + K + VE + + L+ Y + S G
Sbjct: 538 VFFPSYLYMESIISMWQTMGILDEVWKYKLILVETPDAQET--ALALETYRTACSNG--- 592
Query: 595 AVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKI---------------VVGIP 639
+GA L+V RGK+ ++GIP
Sbjct: 593 ---------------------------RGAILLSVARGKVSEGIDFDHHYGRTVLMIGIP 625
Query: 640 FPNINDIQVSLKKKY-NDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIIL 698
F + + ++ D Y+ + N++ A R Q +GR +R + DYG +IL
Sbjct: 626 FQYTESRILKARLEFLRDHYQ-----IRENDFLSFDAMRHAAQCLGRVLRGKDDYGVMIL 680
Query: 699 LDERFQEERNRAHISKWLRKSIKQYD---SFDASLEGLKSFFRDVKGWVGKKMFNGLENS 755
D RF +RN+ + KW+++++ D S D ++ K F R + K
Sbjct: 681 ADRRFGRKRNQ--LPKWIQQALLDADTNLSTDMAVANAKQFLRTMAQPTNPK-------- 730
Query: 756 DNDVDHVSSMDQCKEVTKQNTQELNKSD 783
D + V ++Q + KQ +L + D
Sbjct: 731 DQEGVSVWDLEQLQNFQKQQVTDLGEDD 758
Score = 44.7 bits (104), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 47/91 (51%), Gaps = 6/91 (6%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+++ + V FPY + Y Q +M + TLD +++LE P+GTGK++SLL T+
Sbjct: 3 FYIDDLPVLFPYPRIYPEQYAYMSDIKKTLDVG-----GNSILEMPSGTGKTVSLLSLTI 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLAN 107
A+Q + ++ S + + E L N
Sbjct: 58 AYQMHYPEHRKIVYCSRTMSEIEKALIELHN 88
>gi|291224421|ref|XP_002732204.1| PREDICTED: DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11-like
[Saccoglossus kowalevskii]
Length = 853
Score = 111 bits (278), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 139/332 (41%), Gaps = 75/332 (22%)
Query: 457 TLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEA------PHVI 510
++ LNPAV FK++ S+I+ GT+ P++ F +L G E HVI
Sbjct: 540 SVKFLLLNPAVHFKEIVTKCKSVIVAGGTMQPISEFKEQLFFATGVTPEKISEFACGHVI 599
Query: 511 DVDLQVLTSVISTGPDNYPLNASYKTADGYKLMEKL----CN------------------ 548
D +L + TGP L+ +Y++ D +++++L CN
Sbjct: 600 PDD-HLLPIALCTGPVGVELDFTYQSRDKKEMLDELGRVMCNVCSVVPGGVVCFFPSYEY 658
Query: 549 ------RWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRV 602
W +TG +RL AKK + EP+ + E VL Y + I Q K +
Sbjct: 659 EYKVHAHWDKTGVLTRLGAKKKVLREPRKANLS--ENVLAEYTSCIQQCDKTS------- 709
Query: 603 KREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQ 647
+ GA L+V GK ++VG+P+PNI +
Sbjct: 710 --------------NESGITGALLLSVVGGKMSEGINFSDGLGRCIVMVGLPYPNIKSPE 755
Query: 648 VSLKKKY-NDTYR-SSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQE 705
+ K Y N T S L G Y N +A+NQ+IGR IRH+ DY I+LLD R+ +
Sbjct: 756 LKEKMDYLNSTMGPSGDGKLPGQIHYENLCMKAVNQSIGRAIRHKDDYATILLLDHRYAK 815
Query: 706 ERNRAHISKWLRKSIKQYDSFDASLEGLKSFF 737
R + W+ ++ F + +K FF
Sbjct: 816 SHIRTKLPGWIASELQVMQKFGPAQAAIKKFF 847
Score = 62.4 bits (150), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 85/199 (42%), Gaps = 50/199 (25%)
Query: 146 IFYASRTHSQISQVISEYKKTAY--RVPMAVLASRKHYCTNKYVRD-------------- 189
IF+ SRTHSQ++Q + E +K+ + + L SR++ C N+ VR
Sbjct: 210 IFFCSRTHSQLAQFVREVQKSPFGEDTKVVTLGSRQNLCINESVRRFRSLSLINEKCLEL 269
Query: 190 -------KENIDEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQ 242
K N DEE + + +GCP F N + + + EV DIE L
Sbjct: 270 QKNKKERKRNDDEETQRKRRKKAVGCP-FNNYTALMDY---KDRVLVEVQDIEQL----- 320
Query: 243 VVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDA 302
LV PY+ +++ R A + ++G I+I+DEAHN+ D +
Sbjct: 321 ------------------LVVLPYNTLLHKSTREACGIKLEGNIVIIDEAHNLLDTISNI 362
Query: 303 GSVDIDEDVLLKLQMELEQ 321
S+ I L + +L Q
Sbjct: 363 HSIMITGMQLTRAHSQLSQ 381
Score = 45.4 bits (106), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Query: 32 YGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNC--KLKNQLA 89
Y Q FM ++ TLD+++ + ESPTGTGKSLSL+C L W + K + +L
Sbjct: 18 YDIQKDFMSQLYQTLDQSKI-----GIFESPTGTGKSLSLICGALKWLNDFEEKQRQELE 72
Query: 90 NISHSKPDTEAVT 102
++ K T + T
Sbjct: 73 DLLQGKTKTTSDT 85
>gi|171690222|ref|XP_001910036.1| hypothetical protein [Podospora anserina S mat+]
gi|170945059|emb|CAP71170.1| unnamed protein product [Podospora anserina S mat+]
Length = 802
Score = 111 bits (278), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 183/850 (21%), Positives = 327/850 (38%), Gaps = 188/850 (22%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+ + ++V FPY + Y Q +M + TLD G+C +LE P+GTGK+++LL +
Sbjct: 3 FFIDDLRVLFPYPRIYPEQYAYMVDLKKTLDAG---GNC--VLEMPSGTGKTVTLLSLIV 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAM-NN 135
A+Q + + K L S + + E L F E G T++ + +
Sbjct: 58 AYQMSSQEKRPLIYCSRTMSEIEKALVELKALMKFRAERLGHEEDFRAMGLTSRKNLCLH 117
Query: 136 KNVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDE 195
+VK++ + ++ A R S + I E K R E++D
Sbjct: 118 PDVKREKSGSVVDA-RCRSLTAGFIQEKK-----------------------RKGEDVD- 152
Query: 196 ECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSM 255
C N+ + H + G V ++ L+ GQ C Y+ AR M
Sbjct: 153 -----------VCVYHDNLDNLEPHNLIPNG----VWSLDGLLRYGQKHTQCPYFTARRM 197
Query: 256 ADDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLK 314
+V Y Y+++P I + D K I++ DEAHNI+++ ++ S DI E+ L +
Sbjct: 198 MSQCNVVIYSYHYLLDPKIAERVSKDFSKDCIVVFDEAHNIDNVCIESLSTDITEESLRR 257
Query: 315 LQMELEQVCS-VNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWT-GDKALREL 372
+ + + +N M ++ + +E + RE F + T + L+E
Sbjct: 258 ATRGAQFLENRINEMRDSDQQKLQDEYEKLVEGLRGDDETREEDSFMANPTLPEDLLKEA 317
Query: 373 QEANISR--------QCFPILLECATKAIKEATDT-ESELPHLSGMSVITLEGL------ 417
NI R + F L+ K + ++T S L HL + I + L
Sbjct: 318 VPGNIRRAEHFVAFLRRFIEYLKTRMKVRQVISETPPSFLAHLKEYTFIEKKPLRFCAER 377
Query: 418 FSSLTYFFSRNGSHVSDYQ--------------------LALQKYIKRDSKNPGGNWTHT 457
+SL + + + DYQ L L+ Y ++ P
Sbjct: 378 LTSLVR--TLELTRIEDYQPLQEVATFATLVATYEKGFLLILEPYESDTAEVPNP----V 431
Query: 458 LSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQ-V 516
L CL+ A+ K V + S+I+TSGT+SP+ + L F T ++ + + + +
Sbjct: 432 LHFTCLDAAIAIKPVFDRFSSVIITSGTISPLEMYPKMLN--FETVVQESYSMTLARRSF 489
Query: 517 LTSVISTGPDNYPLNASYK---------------------TADG-------YKLMEKLCN 548
L +++ G D ++ ++ T DG Y +E L +
Sbjct: 490 LPMIVTRGSDQATISTGFQVRNEPSVVRNYGSLLVEFAKITPDGIVLFTPSYLYLESLIS 549
Query: 549 RWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNN 608
W+ G + K + VE + + L+ Y + G
Sbjct: 550 MWQGMGVLDEVWKYKLILVETPDAQET--ALALETYRTACKNG----------------- 590
Query: 609 DLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKK 653
+GA FL V RGK I +G+PF + + +
Sbjct: 591 -------------RGAVFLCVARGKVSEGVDFDKEFGRTVINIGVPFQYTESRILKARLE 637
Query: 654 Y-NDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHI 712
+ +TYR + N++ A R Q +GR IR + DYG ++L D RF+ + +
Sbjct: 638 FLRETYR-----IRENDFLSFDAMRHAAQCLGRVIRGKDDYGVMVLADRRFKSKIQ--QL 690
Query: 713 SKWLRKSIKQYD---SFDASLEGLKSFFRDVKGWVGKKMFNGLENSDNDVDHVSSMDQCK 769
KW+ +++ D S D ++ + FF K + D + + +++Q K
Sbjct: 691 PKWIHQALLGADTNLSTDMAVSNARRFF--------KMIAQPFRTEDQEGISIWTLEQLK 742
Query: 770 EVTKQNTQEL 779
+ ++ +EL
Sbjct: 743 QHQRKMQEEL 752
>gi|380492131|emb|CCF34825.1| DNA repair helicase rad15 [Colletotrichum higginsianum]
Length = 775
Score = 111 bits (278), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 170/776 (21%), Positives = 309/776 (39%), Gaps = 151/776 (19%)
Query: 38 FMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCKLKNQLANISHSKPD 97
+MC + TLD GHC +LE P+GTGK++SLL +A+QQ+ +L S + +
Sbjct: 7 YMCDLKKTLDAG---GHC--VLEMPSGTGKTVSLLSLIVAYQQHNPEHRKLIYCSRTMSE 61
Query: 98 TEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKKMTPTIFYASRTHSQIS 157
E L + + G+ + +K + H +
Sbjct: 62 IEKALAELKALMKYRAQEL---------GEEEEFRGLGLTSRKNLC--------LHPSVK 104
Query: 158 QVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEECKLLLGDRNLGCPQFKNVHKV 217
Q +K+ A++ +R T +V++K++ E + C N+ +
Sbjct: 105 Q-----EKSG-----AIVDARCRSLTAGFVKEKKDRGENVDV--------CVYHDNLDLL 146
Query: 218 RGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGA 277
H + G V + L+ G+ + C Y+ AR M ++ Y Y+++P I
Sbjct: 147 EPHNLIPNG----VWTFDGLLKYGEQHKQCPYFTARRMMQFCNVIIYSYHYLLDPKIAER 202
Query: 278 MEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLK----LQMELEQVCSVNPMIYQP 332
+ ++ K I++ DEAHNI+++ ++ S DI ED L K Q ++ + +
Sbjct: 203 VSRELSKDCIVVFDEAHNIDNVCIESLSTDITEDSLRKATRGAQNLERKIAEMRDTDQEQ 262
Query: 333 LIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRELQEANISR-QCFPILLECATK 391
L Q LV + R A A++E + D L+E NI R + F L+ +
Sbjct: 263 LQNEYQKLVEGL--RGADEARQEDAFMSNPALPDDLLKEAVPGNIRRAEHFVSFLKRFIE 320
Query: 392 AIK---EATDTESELP-----HLSGMSVITLEGL------FSSLTYFFSRNGSHVSDYQ- 436
+K + T SE P HL + I + L +SL + +++ DYQ
Sbjct: 321 YLKTRMKVRHTISETPPSFLAHLREYTFIEKKPLRFCAERLTSLVR--TLELTNIEDYQP 378
Query: 437 -------------------LALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSL 477
L L+ + ++ P L CL+ A+ K V +
Sbjct: 379 LQEVATFATLVATYEKGFLLILEPFESETAEVPNP----VLHFTCLDAAIAIKPVFDRFS 434
Query: 478 SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQ-VLTSVISTGPDNYPLNASYK- 535
S+I+TSGT+SP+ + LG F T ++ + + + + L +++ G D ++ S++
Sbjct: 435 SVIITSGTMSPLEMYPKMLG--FSTVVQESYSMTLARRSFLPMIVTRGSDQSSISTSFQV 492
Query: 536 --------------------TADG-------YKLMEKLCNRWRETGQWSRLNAKKPLFVE 568
T DG Y ME + + W+ + K + VE
Sbjct: 493 RNEPSVVRNYGTLLTEFAKITPDGMVVFFPSYLYMESIISMWQGMNILEEVWKYKLILVE 552
Query: 569 PKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLA 628
+ + L+ Y + G ++ R K D + ++ G
Sbjct: 553 TPDAQETS--LALETYRTACCNGRGAVLLCVARGKVSEGIDFD--------HQYG----- 597
Query: 629 VCRGKIVVGIPFPNINDIQVSLKKKY-NDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCI 687
R + +G+PF + + ++ +TYR + N++ A R Q +GR +
Sbjct: 598 --RTVLCIGVPFQYTESRILKARLEFLRETYR-----IRENDFLSFDAMRHAAQCLGRVL 650
Query: 688 RHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYD---SFDASLEGLKSFFRDV 740
R + DYG ++L D RFQ + RA + KW+ + + D S D ++ + F + +
Sbjct: 651 RGKDDYGIMVLADRRFQ--KKRAQLPKWINQGLLDADTNVSTDMAVSSARRFLKQM 704
>gi|403222902|dbj|BAM41033.1| uncharacterized protein TOT_030000294 [Theileria orientalis strain
Shintoku]
Length = 745
Score = 111 bits (277), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 95/380 (25%), Positives = 172/380 (45%), Gaps = 79/380 (20%)
Query: 23 IQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNC 82
I+ P++PY +QL+FM D ++ L ESPTG+GK++S+LCS L W +N
Sbjct: 10 IEFHLPFKPYPNQLIFMKDAYECFDNSR-----FGLFESPTGSGKTVSILCSALTWLKNN 64
Query: 83 KLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVA--------MN 134
++K+ + + + E+ L I +S P + + Q Q+A +N
Sbjct: 65 RVKSVMCD-----QNLESSDGMLYASNDCIDQSVPKWVLENAYNQKRQMAEEVIRGVDIN 119
Query: 135 NKNVKKK--------------------MTPT-----------------IFYASRTHSQIS 157
+ ++KK M P I SRT SQ++
Sbjct: 120 LEKLRKKVKERIDNSEGVPKLRKGFKRMAPNPSESDAKDEMVNPNKTQIVICSRTFSQLN 179
Query: 158 QVISEYKKTAY---RVPMAVLASRKHYCTNKYVRDK----ENIDEECKLLLGDRNLGCPQ 210
Q + E++K V +A+ R H C N ++ K + ++EEC R C
Sbjct: 180 QFVKEFRKLKELNGNVRLAIGCRRSHVCINDGIKSKCKNSDELNEEC------RRSKCEY 233
Query: 211 FKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYII 270
+ ++ + C+ + D+EDLV +G+ + C+YY+ + +A +V PY II
Sbjct: 234 RSDTMELS-----EIATCYAL-DLEDLVRLGKDLNSCAYYSNLTTVPNADVVLAPYVTII 287
Query: 271 NPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDID----EDVLLKLQMELEQVCS-V 325
N IR M + IK I+I DE HN+ + ++ S ++ +D+L +L+ L + S +
Sbjct: 288 NESIRENMGLRIKDNIVIFDEGHNLIEAITESHSCKLNLRGLKDLLEQLKGYLNKFKSEI 347
Query: 326 NPMIYQPLIEMTQDLVGWIE 345
++ + + E+ + + G ++
Sbjct: 348 KGVLLERITEIMKLVKGLVD 367
Score = 67.0 bits (162), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 88/191 (46%), Gaps = 34/191 (17%)
Query: 581 LKHYYNS-ISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGK------ 633
L +YN + G+ V KK V RE N E N ++GA LAV G
Sbjct: 559 LNVFYNFFVKSGTMDKVSSKKTVFREQKNVNVFPEYSRNCLERGAILLAVFGGNQSEGVD 618
Query: 634 ---------IVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCN----------- 673
++VGIP+P + I++ +K++Y S K L NE +
Sbjct: 619 FSDELARLVLLVGIPYPP-DSIKLKIKREY----YSKKALECANESSSDNYMKLSKEQRT 673
Query: 674 -QAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEG 732
++ +NQ IGR +RH+ DY A+ILLD R++ ++ ++RKSI +++
Sbjct: 674 LMCYKTINQCIGRAMRHKGDYAAVILLDSRYRRREASLYLMNYVRKSISEHELKSTKFTA 733
Query: 733 -LKSFFRDVKG 742
L+ F++ + G
Sbjct: 734 LLQEFYKKLSG 744
>gi|261334932|emb|CBH17926.1| helicase-like protein, putative [Trypanosoma brucei gambiense
DAL972]
Length = 965
Score = 111 bits (277), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 108/356 (30%), Positives = 161/356 (45%), Gaps = 73/356 (20%)
Query: 29 YQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ--------- 79
++PY Q M V L+ R A +E PTG GK+L+LL S L +Q
Sbjct: 12 FEPYTVQREMMRTVHLALNSWPRHTPI-AAIEVPTGCGKTLALLSSVLRYQAGLEKHTPQ 70
Query: 80 --------QNCKLKNQLANIS----------HSKPDT---EAVTDPLANGGGFIPESQPS 118
+ C+ L ++S H K D+ E AN + S
Sbjct: 71 ELEQHFRLRRCRGPPVLPSLSKTEMSSRKWCHCKEDSKHSEESNGLKANTADGEEAWRVS 130
Query: 119 TI------PPSTNGQTAQVAMNNKNV----KKKMTP--TIFYASRTHSQISQVISEYKKT 166
++ PP NG+ +V + + K+ +P TIFY +RTH+Q+ Q + E +K
Sbjct: 131 SLFLRQFRPP--NGKRLRVELVTEGSSELRKQHQSPPCTIFYVTRTHAQLRQCVGELRKL 188
Query: 167 A--YRVPMAVLASRKHYCTNKYVR----------DKENIDEECKLLLGDRNLGCPQFKNV 214
R+ M +L SRK YC N++V + + E C D+ + Q + V
Sbjct: 189 KGLERLKMNILGSRKQYCINQHVLKACANKTLPIEGNTLGEVC-----DKLVSLGQCEAV 243
Query: 215 H-------KVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYS 267
H K HP L +G +V DIEDLV G + C YYAAR + A + F Y
Sbjct: 244 HGYGVLGSKAITHP-LSQGRSDKVWDIEDLVTEGVGMECCPYYAARDLVFFAHINFATYQ 302
Query: 268 YIINPVIRG--AMEVDIKG-AILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELE 320
Y+++P+IR ME +K +I+I DEAHN+ + +DA SV+ D L + E+E
Sbjct: 303 YLLDPLIRHECKMEAALKNHSIIIFDEAHNVPQVCQDALSVETSVDTLRLILNEIE 358
Score = 103 bits (256), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 141/298 (47%), Gaps = 17/298 (5%)
Query: 458 LSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGT--CLEAPHVIDVDLQ 515
+ + CL+ ++ F+ + + ++L SGTL+P + +LG+ + E HV Q
Sbjct: 567 VGIRCLDGSLAFQHILSTAHRVVLASGTLAPFHQLGRDLGIPPSSMATYEGLHVAQKH-Q 625
Query: 516 VLTSVISTGPDNYPLNASYKTADGYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQE 575
V++ D PL+ +Y + + +L + L L P +
Sbjct: 626 YRLGVLTHTVDATPLHCTYGSLKDSSFISQLVETLAMLVEKVELGGV--LVFMPNYTVMK 683
Query: 576 DFEIVLKHYYNSISQ----GSKCAVVRKKRVKREGNNDL-NTIESQENANKKG-ASFLAV 629
+ L Y ++ K + + ++ + D + ++S A +G A F +V
Sbjct: 684 TIGVQLISRYRDAARQMEGTPKSSRFPQVFLESQSAADFPSVLDSFRKATVRGPAVFASV 743
Query: 630 CRGKIVVGIPFPN-----INDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIG 684
R K+ GI F + + + V L+ + T ++ + SG EWY N A RA+NQA+G
Sbjct: 744 FRAKVSEGIDFADCMARLVVCVGVPLQPLKSWTVQAQRRY-SGEEWYVNDAVRAVNQALG 802
Query: 685 RCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFRDVKG 742
RCIRH D+GA++LLD+RF++ + +S+W R+ ++ + S + + L FFR +G
Sbjct: 803 RCIRHSRDFGAMVLLDDRFEQMNLQQSLSRWCREELRVHHSHASLADDLHEFFRTCRG 860
>gi|426372116|ref|XP_004052976.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein 8
[Gorilla gorilla gorilla]
Length = 1016
Score = 111 bits (277), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 140/334 (41%), Gaps = 77/334 (23%)
Query: 457 TLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSEL----GVQFGTCLE--APHVI 510
TL LNPAV F V + ++++ GT+ P++ F +L GV+ +E HVI
Sbjct: 704 TLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHVI 763
Query: 511 DVDLQVLTSVISTGPDNYPLNASYKTADGYKLMEK----LCN------------------ 548
D +L VI +G N PL +++ + ++M++ LCN
Sbjct: 764 PPD-NILPLVICSGISNQPLEFTFQKRELPQMMDEVGRILCNLCGVVPGGVVCFFPSYEY 822
Query: 549 ------RWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRV 602
W + RL A+K +F EPK Q E VL Y I C
Sbjct: 823 LRQVHAHWEKGSLLGRLAARKKIFQEPKSAHQ--VEQVLLAYSRCIQ---ACG------- 870
Query: 603 KREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQ 647
QE GA L+V GK ++VG+PFPNI +
Sbjct: 871 -------------QERGQVTGALLLSVVGGKMSEGINFSDNLGRCVVMVGMPFPNIRSAE 917
Query: 648 VSLKKKYNDTY--RSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQE 705
+ K Y D R+ G N +A+NQ+IGR IRH+ D+ +I+LLD+R+
Sbjct: 918 LQEKMAYLDQTLPRAPGQAPPGKALVENLCMKAVNQSIGRAIRHQKDFASIVLLDQRYAR 977
Query: 706 ERNRAHISKWLRKSIKQYDSFDASLEGLKSFFRD 739
A + W+R ++ +F ++ ++ F R+
Sbjct: 978 PPVLAKLPAWIRARVEVKATFGPAVAAVQKFHRE 1011
Score = 85.5 bits (210), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 97/200 (48%), Gaps = 28/200 (14%)
Query: 146 IFYASRTHSQISQVISEYKKTAY--RVPMAVLASRKHYCTNKYVRD---KENIDEECKLL 200
I+Y SRTHSQ++Q + E KK+ + V + L SR++ C N+ V+ + I++ C +
Sbjct: 339 IYYCSRTHSQLAQFVHEVKKSPFGKDVRLVSLGSRQNLCVNEDVKSLGSVQLINDRCVDM 398
Query: 201 LGDRNL-------------------GCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVG 241
R+ CP F N H+ G L+ EV DIE L+ +G
Sbjct: 399 QRSRHEKKKGAEEEKPKRRRQEKQAACP-FYN-HEQMG--LLRDEALAEVKDIEQLLALG 454
Query: 242 QVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARD 301
+ R C YY +R AQLV PY +++ R A + ++ ++I+DEAHN+ D
Sbjct: 455 KEARACPYYGSRLAIPAAQLVVLPYQMLLHAATRQAAGIRLQDQVVIIDEAHNLIDTITG 514
Query: 302 AGSVDIDEDVLLKLQMELEQ 321
SV++ L + +L Q
Sbjct: 515 MHSVEVSGSQLCQAHSQLLQ 534
>gi|209876510|ref|XP_002139697.1| DNA repair helicase family protein [Cryptosporidium muris RN66]
gi|209555303|gb|EEA05348.1| DNA repair helicase family protein [Cryptosporidium muris RN66]
Length = 812
Score = 111 bits (277), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 196/861 (22%), Positives = 325/861 (37%), Gaps = 217/861 (25%)
Query: 27 FPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW-------- 78
FP+ PY Q F CR D G + ESPTGTGKS+S LCS L+W
Sbjct: 10 FPFTPYKIQEQF-CR--KAWDLFSNPGSI-GIFESPTGTGKSISALCSALSWINTHHKEV 65
Query: 79 ---QQN---------CKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPST-N 125
Q N LK NI S + A+ + +S + + +T +
Sbjct: 66 ITNQTNEHKSKKIPLWVLKKTKINIERSYEEMIALQNTFLEN----VKSHFNLVEQNTKD 121
Query: 126 GQTAQVAM--------NNKNVKKKMTPTIFYASRTHSQISQVISE---------YKKTAY 168
+T +++ + ++ ++ I ASRTHSQ+SQ I E +K +
Sbjct: 122 NETLLISLPEIWRETCSEESKRQYNLFKIIIASRTHSQLSQYIGEVRKLHESGSFKNYCH 181
Query: 169 RV----PMAVLASRKHYCTNKYVRDKENIDEECKLLLGDRNL--GCPQFKNVHK----VR 218
R+ + +ASR H C + VR + L++ D L P K++ K +
Sbjct: 182 RLFKDPSITTVASRSHLCIHPEVRKLPS------LIINDTCLEYTAPNKKDIEKHFCPYK 235
Query: 219 GHPS-LQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGA 277
S L K ++ DIEDL G+ V C YYA + + + PY+ + N R +
Sbjct: 236 SRASILAKLSLCKLMDIEDLRKEGEKVEACPYYAVKEANKFSDITLIPYTTLFNNSTRES 295
Query: 278 MEVDIK--GAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQVCSVNPMIYQPLIE 335
+ V+ G I I+DEAHNI + + ID + C +
Sbjct: 296 LGVEFNSLGTICIIDEAHNIFNAFESSYKASIDLN-----------ACK----------Q 334
Query: 336 MTQDLVGWIERRKATLAK------REFQHFFSCWTGDKALRELQEANISRQCFPILLECA 389
+ + G++E+ + R+ F + +T N+ R ++
Sbjct: 335 LIPNCKGYLEKYGTSFTPNNLSLFRQLLRFITMFTN----------NVER-----IVNSY 379
Query: 390 TKAIKEATDT-ESELPHLSGMSVITLEGLFSSLTY-FFSRNGSHVSDYQLALQKYIKRDS 447
++++DT +S+L H +G+ L F + + FF+ N L + +KR S
Sbjct: 380 RSLKRQSSDTCDSKLQHNTGVISYNLTDFFKIINFSFFNTNDLQTFIENNNLCRKMKRFS 439
Query: 448 --------KNPGG--------------------------------NWTHTLSLWCLNPAV 467
KN G N+ H+ ++ +N ++
Sbjct: 440 IMEIYSSDKNGKGDTISSNTLYTFKSFIDALISADKKYDQIIIEYNFNHSSNILDINCSL 499
Query: 468 V-------FKDVAELSLSIILTSGTLSPMNSFS---SELGVQFGTCLEAPHVIDVDLQVL 517
+ FKD+ + S S +L GTL P+ + + L A I + +L
Sbjct: 500 IPISVDCFFKDLMKNSRSTMLIGGTLQPIFEYKPLYNHLPSSSVYMYSATQSISKN-NLL 558
Query: 518 TSVISTGPDNYPLNASYKTADGYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKG-----G 572
V+ D L+ Y T + + LC L PL P G
Sbjct: 559 GIVVPQNVDGNILDLRYNTRFSHDQLLALC---------QTLALVLPLI--PDGICIFFN 607
Query: 573 SQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQE-------------NA 619
S E+ + + ++KK++ RE N L+T E N
Sbjct: 608 SFIFLEVFFRFIHREAEAKPFLEQIKKKKIFRE--NKLSTALENEQLWESYKKCIYSNNK 665
Query: 620 NKKGASFLAV---------------CRGKIVVGIPF-PNINDIQVSLKKKYNDT-YRSSK 662
GA L V CR I+V +P+ PN ++ K Y + ++
Sbjct: 666 THAGAILLGVLNGRLSEGVNFSDELCRCLIIVSLPYPPNTPILEAKAKYFYEKSDLTTNT 725
Query: 663 NLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRK---- 718
+ LS C + +NQ IGR +RH DY ++LLD R++ + + + W +
Sbjct: 726 DDLSFQSIMC---MKIVNQCIGRALRHSNDYSVVLLLDHRYKRKYIQDMLPSWFTEHLVC 782
Query: 719 --SIKQYDSFDASLEGLKSFF 737
+I ++D ++ L +KSFF
Sbjct: 783 NNNISRWDFYEHVLNPIKSFF 803
>gi|149712588|ref|XP_001490646.1| PREDICTED: DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 [Equus
caballus]
Length = 906
Score = 111 bits (277), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 144/337 (42%), Gaps = 77/337 (22%)
Query: 457 TLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSEL----GVQFGTCLE--APHVI 510
+L LNPAV F V + ++++ GT+ P++ F +L GV +E HVI
Sbjct: 594 SLKFLLLNPAVPFAQVVKECRAVVIAGGTMQPVSDFREQLLACAGVDAERVVEFSCGHVI 653
Query: 511 DVDLQVLTSVISTGPDNYPLNASYKTADGYKLMEK-------LCN--------------- 548
D +L V+ +GP N L +Y+ + ++M + LCN
Sbjct: 654 PPD-NILPLVVCSGPSNQQLEFTYQQRELPQMMTETGRILCNLCNVVPGGVVCFFPSYEY 712
Query: 549 ------RWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRV 602
W ++G +RL +K +F EPK +Q E VL Y I +C
Sbjct: 713 QRQVHAHWDKSGLLARLAVRKKIFQEPKRANQ--VEQVLLEYSKCI----QCC------- 759
Query: 603 KREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQ 647
Q + GA L+V GK ++VG+P+PNI +
Sbjct: 760 ------------GQMGSTMTGALLLSVVGGKMSEGINFSDNLGRCVVMVGMPYPNIKSPE 807
Query: 648 VSLKKKYNDTY--RSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQE 705
+ K Y D R+ + G N +A+NQ+IGR IRH+ D+ +I+LLD+R+
Sbjct: 808 LQEKMAYLDQTLPRTPGQVPPGKALVENLCMKAVNQSIGRAIRHQKDFASIVLLDQRYAR 867
Query: 706 ERNRAHISKWLRKSIKQYDSFDASLEGLKSFFRDVKG 742
A + W+R ++ +F ++ ++ F R+ G
Sbjct: 868 PPILAKLPAWIRDRVEIKTTFGPAIAAMRKFHRERSG 904
Score = 84.0 bits (206), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 93/200 (46%), Gaps = 28/200 (14%)
Query: 146 IFYASRTHSQISQVISEYKKTAY--RVPMAVLASRKHYCTN------------------- 184
I+Y SRTHSQ+SQ + E +K+ + + L SR++ C N
Sbjct: 228 IYYCSRTHSQLSQFVHEVQKSPFGKDTRLVSLGSRQNLCVNEDVRHLGSVQLINDRCVEM 287
Query: 185 ---KYVRDKENIDEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVG 241
K+ R E +E+ K + CP F N +++ L+ EV DIE LV +G
Sbjct: 288 QRNKHERKSEAEEEKPKKRRQEPRATCP-FYNYEQLQ---LLRDEVLVEVKDIEQLVTLG 343
Query: 242 QVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARD 301
+ C YY +R AQLV PY +++ R A + ++G ++++DEAHN+ D
Sbjct: 344 KEAHACPYYGSRFAIPAAQLVVLPYQMLLHAATRQAAGIRLQGQVVVIDEAHNLIDTITG 403
Query: 302 AGSVDIDEDVLLKLQMELEQ 321
S ++ L + +L Q
Sbjct: 404 IHSAEVSGSQLCQAHSQLLQ 423
Score = 54.3 bits (129), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 40/68 (58%), Gaps = 5/68 (7%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
VG I FP+ PY Q FM + L+ A + G + ESPTGTGKSLSL+C L+W
Sbjct: 8 VGDIHFPFPFTPYSIQKDFMAELYQVLE-AGKIG----IFESPTGTGKSLSLICGALSWL 62
Query: 80 QNCKLKNQ 87
++ + K +
Sbjct: 63 RDFEQKKR 70
>gi|296417607|ref|XP_002838444.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295634383|emb|CAZ82635.1| unnamed protein product [Tuber melanosporum]
Length = 807
Score = 110 bits (276), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 160/692 (23%), Positives = 254/692 (36%), Gaps = 183/692 (26%)
Query: 142 MTPTIFYASRTHSQISQVISEYKKTAY--------------RVPMAVLASRKHYCTNKYV 187
++P IFY SRTHSQ++Q I+E ++ + V L SRK+ C N V
Sbjct: 160 LSPAIFYCSRTHSQLTQFINELRRVKFPPSSPGGEGSALEEEVKHLSLGSRKNLCINPKV 219
Query: 188 RDKEN---IDEECKLLL------GDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLV 238
N I+E C L R P + VR + ++ DIEDL
Sbjct: 220 TKLGNPTAINERCLELQRSGASEASRCEFLPGRDDQVAVR---DFRDHTLAKIRDIEDLA 276
Query: 239 NVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDI 298
++G+ ++ CPY Y P I+ + V + +L+ A D+
Sbjct: 277 SLGR-----------------KMGICPY-YASRPTIKPSEIVTLPYPLLLQKSAREALDL 318
Query: 299 ARDAGSVDIDEDVLLKLQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQH 358
+ V +DE + + IY + + Q ++R K+ L
Sbjct: 319 SLKGHIVIVDE---------AHNLINAISSIYSITVSLAQ-----LQRSKSQL-DIYLAR 363
Query: 359 FFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVITLEGLF 418
F + G + +Q I L E + K+ KE +L + G+ + L
Sbjct: 364 FKNRLKGKNKVYVMQTLRIIASLASYLEEISKKS-KEGVIAPGDLLAMQGIDQVNFYKLQ 422
Query: 419 SSLTYFFSRNGSHVSDYQLALQKYIKRDSKN-----PGGN-----------WTHT----- 457
+ L S+ V Y + K K KN PGG TH
Sbjct: 423 TYLNE--SKLARKVEGY--IVHKQAKEQEKNKLPNKPGGAKALQPTASIPVLTHIQGFLL 478
Query: 458 -----------------------LSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSS 494
L L+PA F+++ E + ++IL GT+ PMN +++
Sbjct: 479 ALTNPSAEGKLFHGKTEDKNDTCLRYMLLDPAHHFQEIVEEARAVILAGGTMEPMNDYTN 538
Query: 495 ELGVQFGT----CLEAPHVIDVDLQVLTSV-ISTGPDNYPLNASYKTA------------ 537
L L HVI + LT++ ++ GP +++
Sbjct: 539 HLFPYLPKEKIRTLSCGHVIPK--ENLTALPVTKGPGGREFEFTFEKRMQPAMIEELGRA 596
Query: 538 ----------------DGYKLMEKLCNRWRET----------GQWSRLNAKKPLFVEPKG 571
Y +E + ++WR+ W RL +K +F E
Sbjct: 597 IVNLCQVIPHGVVCFFPSYAYLEFVVSQWRKKPTPASNTAAKSLWERLEDRKTVFRESSD 656
Query: 572 GSQEDFEIVLKHYYNSISQGSK---CAVVRKKRVKREGNNDLNTIESQENANKKGASFLA 628
GS E VL+ Y +I G +VV K + ND
Sbjct: 657 GS--SVEEVLREYAQAIDSGKGGLLLSVVGGKMSEGINFND------------------N 696
Query: 629 VCRGKIVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIR 688
+ RG I+VG+PFPN N + K ++ + +G E+Y N RA+NQ+IGR IR
Sbjct: 697 LGRGIIMVGLPFPNSNTAEWRAKLEHAEK-------AAGREFYENACMRAVNQSIGRAIR 749
Query: 689 HRFDYGAIILLDERFQEERNRAHISKWLRKSI 720
HR DY I L D R+ +R + + KW++ +
Sbjct: 750 HREDYAVIALFDRRYSTDRIASKLPKWIQNGL 781
>gi|380094849|emb|CCC07351.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 806
Score = 110 bits (276), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 166/779 (21%), Positives = 309/779 (39%), Gaps = 159/779 (20%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+++ + V FPY + Y Q +M + TLD G+C +LE P+GTGK+++LL +
Sbjct: 3 FNIDDLPVLFPYPRIYPEQYAYMVDLKKTLDAG---GNC--VLEMPSGTGKTVTLLSLIV 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNK 136
A+QQ + PE + T + + + +
Sbjct: 58 AYQQ------------------------------YYPEHRKLIYCSRTMSEIEKALVELR 87
Query: 137 NVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKEN---I 193
+ K F A R + E++ L SRK+ C + V+ +++ +
Sbjct: 88 ALMK------FRAERLGRE-----EEFRGLG-------LTSRKNLCLHPSVKREKSGTIV 129
Query: 194 DEECK-LLLGDRNLGCPQFKNVHKVRGHPS---LQKGGC--HEVHDIEDLVNVGQVVRGC 247
D C+ L G + +NV H + L++G + + ++ L+ G+ + C
Sbjct: 130 DARCRSLTAGFVKEKREKGENVETCIYHDNLDLLEQGNLIPNGIWTLDGLLRYGEEKKQC 189
Query: 248 SYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVD 306
Y+ AR M ++ Y Y+++P I + D+ K I++ DEAHNI+++ ++ S D
Sbjct: 190 PYFTARRMMQYCNVIIYSYHYLLDPKIAERVSKDLSKDCIVVFDEAHNIDNVCIESLSTD 249
Query: 307 IDEDVLLKLQMELEQV-CSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWT- 364
I +D L++ + + + M ++ + +E K R+ F + T
Sbjct: 250 ITQDSLMRATRGAQNLEAKIAEMKDSDQEKLQSEYEKLVEGLKGLDEGRQEDAFMANPTL 309
Query: 365 GDKALRELQEANISR--------QCFPILLECATKAIKEATDT-ESELPHLSGMSVI--- 412
D L+E NI R + F L+ K + ++T S L HL + I
Sbjct: 310 PDDLLKEAVPGNIRRAEHFVAFLRRFIEYLKTRMKVRQVISETPPSFLAHLKEYTFIEKK 369
Query: 413 --------------TLEGL-------FSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPG 451
TLE + F + ++ + L L+ Y +K P
Sbjct: 370 PLRFCAERLTSLVRTLELTNIEDYRPLQEVATFATLVATYEKGFLLILEPYESDTAKTPN 429
Query: 452 GNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVID 511
L CL+ A+ K V + S+I+TSGT+SP+ + L F T ++ + +
Sbjct: 430 P----VLHFTCLDAAIAIKPVFDRFSSVIITSGTISPLEMYPKMLN--FETVVQESYAMT 483
Query: 512 VDLQ-VLTSVISTGPDNYPLNASYK---------------------TADG-------YKL 542
+ + L +++ G D ++ S++ T DG Y
Sbjct: 484 LARRSFLPMIVTRGSDQASISTSFQVRNEPSVVRNYGNLLTEFARMTPDGMVVFFPSYLY 543
Query: 543 MEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRV 602
ME + + W+ G + K + VE + + L+ Y + G ++ R
Sbjct: 544 MESIISMWQGMGILDEVWKHKLILVETPDAQETS--LALETYRTACCNGRGAVLLCVARG 601
Query: 603 KREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKY-NDTYRSS 661
K D + ++ G R + +G+PF + + ++ +TYR
Sbjct: 602 KVSEGIDFD--------HQYG-------RTVLCIGVPFQYTESRILKARLEFLRETYR-- 644
Query: 662 KNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSI 720
+ N++ A R Q +GR +R + DYG ++L D RF + RA + KW+ +++
Sbjct: 645 ---IRENDFLSFDAMRHAAQCLGRVLRGKDDYGVMVLADRRFM--KKRAQLPKWINQAL 698
>gi|182705254|sp|Q92771.3|DDX12_HUMAN RecName: Full=Putative ATP-dependent RNA helicase DDX12; AltName:
Full=CHL1-related protein 2; Short=hCHLR2; AltName:
Full=DEAD/H box protein 12
Length = 950
Score = 110 bits (276), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 116/463 (25%), Positives = 190/463 (41%), Gaps = 124/463 (26%)
Query: 336 MTQDLVGWIERRKATLAKRE------FQHFFSCWTGDKALRELQEANISRQCFPILLECA 389
+++ L G+ ER A + RE FQ F L+ LQ P
Sbjct: 523 ISRKLFGFTERYGAVFSSREQPKLAGFQQF---------LQSLQPRTTEALAAP------ 567
Query: 390 TKAIKEATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKN 449
A ++++ +P + ++ +EG ++LT +++G + Q +L +
Sbjct: 568 ------ADESQASVPQPAS-PLMHIEGFLAALTTA-NQDGRVILSRQGSLSQ-------- 611
Query: 450 PGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSEL----GVQFGTCLE 505
TL LNPAV F V + ++++ GT+ P+++F +L GV+ +E
Sbjct: 612 ------STLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPVSNFRQQLLACAGVEAERVVE 665
Query: 506 --APHVIDVDLQVLTSVISTGPDNYPLNASYKTADGYKLMEK----LCN----------- 548
HVI D +L VI +G N PL +++ D ++M++ LCN
Sbjct: 666 FSCGHVIPPD-NILPLVICSGVSNQPLEFTFQKRDLPQMMDEVGRILCNLCGVVSGGVVC 724
Query: 549 -------------RWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCA 595
W + G RL A+K +F EPK Q E VL Y S+C
Sbjct: 725 FFPSYEYLRQVHAHWEKGGLLGRLAARKKIFQEPKSAHQ--VEQVLLAY-------SRC- 774
Query: 596 VVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPF 640
L QE GA L+V GK ++VG+PF
Sbjct: 775 --------------LQAC-GQERGPVTGALLLSVVGGKMSEGINFSDNLGRCVVMVGMPF 819
Query: 641 PNINDIQVSLKKKYNDTY--RSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIIL 698
PNI ++ K Y D R+ G N +A+NQ+IGR IRH+ D+ +I+L
Sbjct: 820 PNIRSAELQEKMAYLDQTLPRAPGQAHPGKALVENLCMKAVNQSIGRAIRHQKDFASIVL 879
Query: 699 LDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLK----SFF 737
LD+R+ A + W+R ++ +F ++ ++ +FF
Sbjct: 880 LDQRYARPPVLAKLPAWIRARVEVKATFGPAIAAVQKVSPTFF 922
Score = 84.0 bits (206), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 96/200 (48%), Gaps = 28/200 (14%)
Query: 146 IFYASRTHSQISQVISEYKKTAY--RVPMAVLASRKHYCTNKYVRD---KENIDEECKLL 200
I++ SRTHSQ++Q + E KK+ + V + L SR++ C N+ VR + I+ C +
Sbjct: 248 IYHCSRTHSQLAQFVHEVKKSPFGKDVRLVSLGSRQNLCVNEDVRSLGSVQLINNRCVDM 307
Query: 201 LGDRNL-------------------GCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVG 241
R+ CP F N H+ G L+ EV D+E L+ +G
Sbjct: 308 QRSRHEKKKGAEEEKPKRRRQEKQAACP-FYN-HEQMG--LLRDEALAEVKDMEQLLALG 363
Query: 242 QVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARD 301
+ R C YY +R AQLV PY +++ R A + ++ ++I+DEAHN+ D
Sbjct: 364 KEARACPYYGSRLAIPAAQLVVLPYQMLLHAATRQAAGIRLQDQVVIIDEAHNLIDTTTS 423
Query: 302 AGSVDIDEDVLLKLQMELEQ 321
SV++ L + +L Q
Sbjct: 424 MHSVEVSGSQLCQAHSQLLQ 443
>gi|392560811|gb|EIW53993.1| DNA repair helicase [Trametes versicolor FP-101664 SS1]
Length = 875
Score = 110 bits (276), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 138/325 (42%), Gaps = 56/325 (17%)
Query: 463 LNPAVVFKDVAELSLSIILTSGTLSPMN----SFSSELGVQFGTCLEAPHVIDVD-LQVL 517
LNPA F++V + + ++IL GT+SP++ S L + H+I + LQ L
Sbjct: 559 LNPATYFQEVIDSARAVILAGGTMSPIDDVVHQLFSALPADRLSTFSCGHIIPPENLQTL 618
Query: 518 TSVISTGPDNYPLNASYKT----------------------------ADGYKLMEKLCNR 549
V+ GP L Y+ Y + + +
Sbjct: 619 --VLKKGPRGGELQFKYQQRGDEGLIAELGQILLNFTNVVPGGMVVFVPSYAFLNTVTKQ 676
Query: 550 WRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNND 609
W+ G +LNAKK +F EP+ + E VL+ Y I G A +K+ G
Sbjct: 677 WQAGGLLEKLNAKKKVFSEPQ--QSNEVEAVLRDYSAQIQSGDDSAGGKKR-----GALL 729
Query: 610 LNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLS--- 666
+ ++ + A LA R +++G+PF N+ ++ + Y + + +
Sbjct: 730 FAVVGAKLSEGLNFADDLA--RAVVIIGLPFANLGSPELRERMNYVNRLEQRRRAAAAPS 787
Query: 667 ---------GNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLR 717
G E Y N A+NQ+IGR IRHR D+ A+IL+D R+ R R+ + KW+
Sbjct: 788 SRPGGAKDAGTELYENMCMNAVNQSIGRAIRHRGDWAALILVDGRYASPRIRSKLPKWIE 847
Query: 718 KSIKQYDSFDASLEGLKSFFRDVKG 742
K D F +++ L F+R+ K
Sbjct: 848 AGTKVADGFGQAMKELGRFYREKKA 872
Score = 78.2 bits (191), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 87/190 (45%), Gaps = 41/190 (21%)
Query: 146 IFYASRTHSQISQVISEYKKTAYRVPMAV------------------------------- 174
I+YASRTHSQ++Q + E +K ++ +AV
Sbjct: 183 IYYASRTHSQLAQALHELEKLKLKLNVAVSSIQQVHQKLATAKRSASAVEEHDASTEDEE 242
Query: 175 --------LASRKHYCTNKYVRDK-ENIDEECKLLLGDRNLG-CPQFKNVHKVRGHPSLQ 224
L SRK C ++ +R+K ++DE C+ +LG++ CP V + L+
Sbjct: 243 GSGARAVSLGSRKQLCIHERLREKASDLDEACRQMLGEKGKKRCPHLPTVEEETKMLDLR 302
Query: 225 KGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKG 284
DIEDL GQ C Y+ AR AQLV PY+ ++ R A+ +D+ G
Sbjct: 303 DQILAVPKDIEDLFLTGQAADTCPYFGARKAIPQAQLVLLPYNLLLQRTAREALGIDLTG 362
Query: 285 AILILDEAHN 294
++I+DEAHN
Sbjct: 363 QVVIIDEAHN 372
Score = 54.3 bits (129), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 40/66 (60%), Gaps = 8/66 (12%)
Query: 27 FPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW---QQNCK 83
FP++PY QL M V S ++ + A+ ESPTGTGK+LSLLC++L W +Q
Sbjct: 15 FPFKPYDIQLELMSHVYSCIENGK-----VAITESPTGTGKTLSLLCASLTWLRDEQERA 69
Query: 84 LKNQLA 89
K +LA
Sbjct: 70 RKGKLA 75
>gi|189188692|ref|XP_001930685.1| TFIIH basal transcription factor complex helicase subunit
[Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187972291|gb|EDU39790.1| TFIIH basal transcription factor complex helicase subunit
[Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 772
Score = 110 bits (275), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 162/762 (21%), Positives = 305/762 (40%), Gaps = 125/762 (16%)
Query: 39 MCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCKLKNQLANISHSKPDT 98
MC + TLD+ GHC +LE P+GTGK++SLL +A+QQ+ K +L S + +
Sbjct: 1 MCDLKRTLDQG---GHC--VLEMPSGTGKTVSLLSLIVAYQQHYPEKRKLIYCSRTMSEI 55
Query: 99 EAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKKMTPTIFYASRTHSQISQ 158
E L + +T ++ +T SR + +
Sbjct: 56 EKALAELKALMKY---------------RTTELGYEEDFRGLGLT------SRKNLCLHP 94
Query: 159 VISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEECKLLLGDRNLGCPQFKNVHKVR 218
+ K V+ +R T +V++K+ E +L C +N+ +
Sbjct: 95 SVKREKSG------TVVDARCRSLTAGFVKEKKERGEPVEL--------CVYHENLDLLE 140
Query: 219 GHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAM 278
H + G V + ++ G+ + C Y+ AR M ++ Y Y+++P I +
Sbjct: 141 PHNLIPPG----VWTFDGMLKYGEQQKQCPYFTARRMMPHCNVIIYSYHYLLDPKIADRV 196
Query: 279 EVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQV-CSVNPMIYQPLIEM 336
++ K I++ DEAHNI+++ ++ S+D+ EDVL K + + + M ++
Sbjct: 197 SKELSKDCIVVFDEAHNIDNVCIESLSIDLTEDVLRKATKGVNNLDRKITEMKSSDAEKL 256
Query: 337 TQDLVGWIE-RRKATLAKREFQHFFSCWTGDKALRELQEANISR--------QCFPILLE 387
+ +E R A A+ E + D L E NI R + F L+
Sbjct: 257 QNEYAKLVEGLRAADEARNEDAFMANPALPDDLLTEAVPGNIRRAEHFVAFLKRFIEYLK 316
Query: 388 CATKAIKEATDTESE-LPHLSGMSVITLEGL------------------------FSSLT 422
K + DT E L HL ++ I + L +
Sbjct: 317 TRMKVLNVVADTPPEFLKHLRDLTFIERKPLRFCAERLTSLVRTLELTNIEDYQPLQEVA 376
Query: 423 YFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILT 482
F + ++ + + L ++ + + P L L CL+ A+ K V E S+I+T
Sbjct: 377 TFATLVATYETGFLLIIEPFESATATVPNP----VLHLTCLDAAIAIKPVFERFYSVIVT 432
Query: 483 SGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQ-VLTSVISTGPDNYPLNASYKTADGYK 541
SGT+SP++ + L F T ++ + + + L ++ G D + + ++ + +
Sbjct: 433 SGTMSPLDMYPRMLN--FNTVVQESFTMTLTRKSFLPMIVDRGNDQNQVTSQFEHRNDLQ 490
Query: 542 LMEKLCNRWRE----TGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVV 597
+ N E T + L++E + + EI+ + + ++
Sbjct: 491 VQRNFGNLLIEFCKLTPDGVVVFFPSYLYMESIISAWQGMEILDTVWKYKL-------IL 543
Query: 598 RKKRVKREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPN 642
+ +E L T + N N +GA L V RGK I +G+P+
Sbjct: 544 VETPDAQETALALETFRTACN-NGRGAVLLCVARGKVSEGIDFDHHYGRTVICMGVPYQY 602
Query: 643 INDIQVSLKKKY-NDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDE 701
+ + ++ +TYR + ++ A R Q +GR IR + DYG ++L D+
Sbjct: 603 TESRILKARLEFLRETYR-----IKEADFLSFDAMRHAAQCLGRVIRGKDDYGIMVLADK 657
Query: 702 RFQEERNRAHISKWLRKSIKQYD---SFDASLEGLKSFFRDV 740
RF + + + KW+++ + S D ++ K+F +D+
Sbjct: 658 RFN--KKQTQLPKWIQQGLDAKSTKLSIDQAVGAAKNFLKDM 697
>gi|255559474|ref|XP_002520757.1| DNA repair helicase rad3/xp-d, putative [Ricinus communis]
gi|223540142|gb|EEF41719.1| DNA repair helicase rad3/xp-d, putative [Ricinus communis]
Length = 758
Score = 110 bits (275), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 162/745 (21%), Positives = 289/745 (38%), Gaps = 169/745 (22%)
Query: 122 PSTNGQTAQVA--MNNKNVKKKMTPT-IFYASRTHSQISQVISEYK----------KTAY 168
P+ G+T + + + ++ K +P + Y +RT ++ + ++E K A
Sbjct: 43 PTGTGKTIALLSLITSYSLSKPQSPVKLIYCTRTVHEMEKTLAELKLLHNYQIKHLGPAA 102
Query: 169 RVPMAVLASRKHYCTNKYVRDKEN---IDEECKLLLGD--RNLG--------CPQFKNVH 215
R+ L+SRK+ C N V EN +D C+ L R + C F+N
Sbjct: 103 RILAIGLSSRKNLCVNPRVLAAENRDSVDAGCRKLTASWMRAMAAENPNIPTCEFFENYE 162
Query: 216 KVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIR 275
+ L G V+ ++DL G+ C Y+ AR M A +V Y Y+++P +
Sbjct: 163 RAASAAVLPPG----VYTLQDLRTYGKEKGWCPYFLARHMVQFANVVVYSYQYLLDPKVA 218
Query: 276 GAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQVCSVNPMIYQPLI 334
G + ++ K ++++ DEAHNI+++ +A SV + + L L + +N I +
Sbjct: 219 GIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRKQTLEGASRNLSR---INQEIERFKA 275
Query: 335 EMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRE--LQEA---NISR-QCFPILLEC 388
L R LA+R W + AL + L+EA NI R + F +L
Sbjct: 276 TDAGRLRAEYNRLVEGLAQRGNLAVTDTWLSNPALPDDILKEAVPGNIRRAEHFLHVLRR 335
Query: 389 ATKAIKEATDTE-----------SELPHLSGMSVITLEGLFSSLTY-------------- 423
+ +K DTE + L +G+ TL+ + L
Sbjct: 336 LVQYLKGRLDTENVEKESPVSFVASLNSQAGIDQKTLKFCYDRLHSLMLTLEITDTDEFL 395
Query: 424 -------FFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELS 476
F + G++ + + ++ + +R P L L C + ++ K V +
Sbjct: 396 HVQTICDFATLVGTYSRGFSIIIEPFDERMPHIPDP----VLQLSCHDASLAIKPVFDRF 451
Query: 477 LSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQ-VLTSVISTGPDNYPLNASYK 535
S+++TSGTLSP++ + L F + + + + V++ G D P++ +
Sbjct: 452 QSVVITSGTLSPIDLYPRLL--NFHPVVSRSFTMSLTRDCICPMVLTRGSDQLPVSTKFD 509
Query: 536 ---------------------TADG-------YKLMEKLCNRWRETGQWSRLNAKKPLFV 567
DG Y M+ + N W ETG + K +F+
Sbjct: 510 MRSDPGVARNYGKLLVEMVSVVPDGIVCFFVSYSYMDGIINSWNETGILKEIMQHKLVFI 569
Query: 568 EPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFL 627
E +Q+ E L ++ + C +GA F
Sbjct: 570 E----TQDVVETTLA--LDNYRRACDCG--------------------------RGAVFF 597
Query: 628 AVCRGK---------------IVVGIPFP-NINDIQVSLKKKYNDTYRSSKNLLSGNEWY 671
+V RGK I+ GIPF ++ I ++ + DT++ + ++
Sbjct: 598 SVARGKVAEGIDFDRHYGRLVIMFGIPFQYTLSKILLARLEYLRDTFQ-----IKEGDFL 652
Query: 672 CNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYD---SFDA 728
A R Q +GR IR + DYG +I D+R+ R+ + W+ ++ + S D
Sbjct: 653 TFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDANLNLSTDM 712
Query: 729 SLEGLKSFFR------DVKGWVGKK 747
+L + F R D G G+K
Sbjct: 713 ALHIAREFLRKMAQPYDKTGASGRK 737
>gi|393904465|gb|EFO18242.2| hypothetical protein LOAG_10252 [Loa loa]
Length = 533
Score = 110 bits (275), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 133/296 (44%), Gaps = 52/296 (17%)
Query: 478 SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTA 537
S+I+TSGTLSP++SF + LG+ F LE H ++D Q+L + I L ++
Sbjct: 12 SVIVTSGTLSPLDSFVNSLGISFPITLENEHAANLD-QILGARIRFSQGGIDLCGTFHKR 70
Query: 538 ------------------------DGYKLMEKLCNRWR-----ETGQWSRLNAKKPLFVE 568
Y +M W+ T W + K F+E
Sbjct: 71 IYLWSWEVIIRACQIIPGGILVFFSSYVVMNSCLKFWKTAKFGATFMWEAITTHKEAFIE 130
Query: 569 PKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLA 628
PK S+ + + VL + + +G + + + + ++ ++S+
Sbjct: 131 PK--SKLELKAVLLQFRQKVREGGGNGAILFAVCRAKVSEGIDFLDSES----------- 177
Query: 629 VCRGKIVVGIPFPNINDIQVSLKKKYNDTYRSS------KNLLSGNEWYCNQAFRALNQA 682
RG IV+GIP+ + ++ LKK++ R+ K +S +EWY A R +NQA
Sbjct: 178 --RGVIVIGIPYAPTTNPRIELKKQFLTKERNGVAKKELKKNISADEWYQVDAIRGVNQA 235
Query: 683 IGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
IGR +RH+ D+G +IL+D RF ++ S W+R+S+K Y + K FF+
Sbjct: 236 IGRVLRHKDDFGVVILVDSRFCSMPSKRFPS-WMRESLKNYQNIGHFENDCKQFFK 290
>gi|340518246|gb|EGR48488.1| predicted protein [Trichoderma reesei QM6a]
Length = 857
Score = 110 bits (275), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 94/336 (27%), Positives = 148/336 (44%), Gaps = 66/336 (19%)
Query: 458 LSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSEL--GVQFG--TCLEAPHVIDVD 513
L+ L+P F VA + ++IL GT+SP + +L ++ G T L HVI +
Sbjct: 524 LTYLLLSPTHAFSSVASSARAVILAGGTMSPFQDYKDQLFPTLEPGKVTSLSCGHVIPPE 583
Query: 514 LQVLTSVISTGPDNYPLNASYKTADGYKLMEKL-------CN------------------ 548
+ ++ S+ P + P S+K ++M +L CN
Sbjct: 584 NLCVWTLASSNPASPPFEFSFKQRGNREMMTQLGLAILNVCNIVPDGVVVFFPSYGYLDE 643
Query: 549 -------RWRETGQ--WSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRK 599
R E+ Q W RL A+K +F + KG S ED VL+ Y +I VR
Sbjct: 644 IVKVWQQRQGESSQTIWDRLQARKSVFRDSKGESSED---VLRDYSQAILG------VRP 694
Query: 600 KRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYNDTYR 659
KR G L+ + + + + L C +VVG+P+PNI K +Y ++
Sbjct: 695 AGDKRTGALLLSVVGGKMSEGINFSDRLGRC--VMVVGLPYPNIASPDWKAKLEYIESTT 752
Query: 660 SSKNLLSGN--------------EWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQE 705
++ + G ++Y N RA+NQ+IGR IRHR DY AIIL+D R+
Sbjct: 753 EARLVKEGRNSGEATAQAKQAARDFYENACMRAVNQSIGRAIRHRGDYAAIILVDRRYGT 812
Query: 706 ERNRAHISKWLRKSIKQYD---SFDASLEGLKSFFR 738
+R R + W+R +++ A + L +FFR
Sbjct: 813 DRIRGKLPGWIRDGLEKESHERGLGALMGALGAFFR 848
Score = 78.2 bits (191), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 88/189 (46%), Gaps = 32/189 (16%)
Query: 146 IFYASRTHSQISQVISEYKKTAYR------------------VPMAVLASRKHYCTNKYV 187
I+Y SRTHSQ+SQ ISE ++ A+ V + L+SR+ C N +V
Sbjct: 189 IYYTSRTHSQLSQFISELRRPAFPPSLPPSVAKASDVSPTEPVKLLPLSSRQKLCINPFV 248
Query: 188 RDKENIDEECKLLLGDRNLGCPQFKNVHKVRGHPS---------LQKGGCHEVHDIEDLV 238
++ + DR Q K+ K P + + DIEDL
Sbjct: 249 ARLGSVQA-----INDRCAELQQAKSSSKCSFVPKEELLSQTHQFRDSALATIPDIEDLH 303
Query: 239 NVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDI 298
++G+ + C YYA+R A+++ PY ++ R A+ + ++G ++I+DEAHNI D
Sbjct: 304 HLGKSLSICPYYASRVALPGAEIITLPYPLLLQQSAREALGIKLEGNVVIIDEAHNILDA 363
Query: 299 ARDAGSVDI 307
+ + +I
Sbjct: 364 ISNVHAAEI 372
Score = 57.0 bits (136), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 17 AYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
A+ + + PY PY Q FM V L+ +G +LESPTGTGKSLSL+C++L
Sbjct: 9 AHELSSLDFHHPYTPYDVQNQFMQTVYQVLETG--NGQV-GILESPTGTGKSLSLICASL 65
Query: 77 AWQQNCKLKNQLANISHS 94
W +N K Q A + +
Sbjct: 66 TWLRNYKATRQEAALQEA 83
>gi|340378232|ref|XP_003387632.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8-like [Amphimedon queenslandica]
Length = 886
Score = 110 bits (275), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 104/200 (52%), Gaps = 21/200 (10%)
Query: 143 TPTIFYASRTHSQISQVISEYKKTAYRVPMAV--LASRKHYCTNKYVRDKENI---DEEC 197
T IFYASRTHSQ++Q + E KKT+Y+ ++V L SR+ C NK V ++I +E C
Sbjct: 198 TVKIFYASRTHSQLTQFVHEVKKTSYKDTVSVIPLGSRQTCCLNKSVTKLQSISLINERC 257
Query: 198 KLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCH----------------EVHDIEDLVNVG 241
L ++ + + K + H ++ GC E+ DIE LV +G
Sbjct: 258 IELQKNKKKSSTRDNDTVKTKRHRTVNSDGCDYYKLNNIETMRDLALDEIQDIEQLVTLG 317
Query: 242 QVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARD 301
+ + GC YYA R AQL+ PY+ +++ R A+ + +KG I+I+DEAHN+ D
Sbjct: 318 RDISGCPYYATRYAVPHAQLIVLPYNILLHSNTRDAVGIKLKGNIVIIDEAHNLIDTISS 377
Query: 302 AGSVDIDEDVLLKLQMELEQ 321
SV I + K +L Q
Sbjct: 378 IHSVHITMHQIQKTHSQLLQ 397
Score = 97.4 bits (241), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 138/320 (43%), Gaps = 60/320 (18%)
Query: 457 TLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLE------APHVI 510
+L LNP+V F D+ + + +++L GT+ P + F +L G ++ HVI
Sbjct: 559 SLKYLLLNPSVHFTDIVKEARAVVLAGGTMQPFSDFKEQLFTGAGVPIDRFFEFSCGHVI 618
Query: 511 DVDLQVLTSVISTGPDNYPLNASYKTADGYKLM--------------------------- 543
D Q+L +S G Y N +Y+ +++
Sbjct: 619 GDD-QLLPLTLSKGTSGYTFNFNYEQRQDKQMIIELGRTISNIVTIVPGGVVCFFPSYEY 677
Query: 544 EKLC-NRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSI----SQGSKCAVVR 598
EKL N W + G R+ KK +F EPK SQ E+VL Y I S S +
Sbjct: 678 EKLVFNIWEKNGLLDRIANKKQIFREPKLASQA--ELVLSQYARCIEVCISVSSLTGALM 735
Query: 599 KKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKY-NDT 657
V + + +N ++ + R I+VG+P+PNI ++ K +Y N T
Sbjct: 736 SCVVGGKLSEGINFSDN-------------LGRCVIMVGLPYPNIKSPELIEKMEYLNST 782
Query: 658 YR---SSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISK 714
+ SSK+ G Y N +A+NQ+IGR IRH DY IIL+D+R+ + +
Sbjct: 783 QKVDVSSKS--PGQMHYDNLCMKAVNQSIGRAIRHANDYATIILIDQRYSHPSVYSKLPN 840
Query: 715 WLRKSIKQYDSFDASLEGLK 734
W+ + SF S L+
Sbjct: 841 WISSQLLITTSFGQSFSALR 860
Score = 53.1 bits (126), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 32/52 (61%), Gaps = 5/52 (9%)
Query: 27 FPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
FP++PY Q FM + STL+ + L ESPTGTGKSLS++C L W
Sbjct: 12 FPFKPYSIQTDFMRSLYSTLEEGKV-----GLFESPTGTGKSLSIICGCLKW 58
>gi|215736805|dbj|BAG95734.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 596
Score = 110 bits (274), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 133/568 (23%), Positives = 222/568 (39%), Gaps = 138/568 (24%)
Query: 233 DIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEA 292
DIEDL +G+ + C YY AR M A LV PY ++ R ++ +++K +++I+DEA
Sbjct: 22 DIEDLAQLGKKIGTCPYYGARDMVRTADLVVLPYQSLLLKSARESLGLNLKNSVVIIDEA 81
Query: 293 HNIEDIARDAGSVDIDED----VLLKLQMELEQVCSV----NPMIYQPLIEMTQDLVGWI 344
HN+ D + I +L L+ L + SV N Q L +T+ + +
Sbjct: 82 HNLADSLTSMYNSKITSSQLNAILSHLEAYLNRFQSVLGAGNRRYIQTLTVLTRSFLRVL 141
Query: 345 ERRK---ATLAKREFQHFFSCWTGD-----KALRELQEANISRQCFPILLECATKAIKEA 396
+ T+ F D K + ++E+NI + + +
Sbjct: 142 TSNQDDACTMTSMTINQFLFSLDIDNINIVKLCQYVKESNIIHK-----VSGYANKLNIN 196
Query: 397 TDTESELPHL----SGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGG 452
D + L H G S+ + + L L + N + + I K G
Sbjct: 197 QDGVNHLSHQQQYDEGSSIASFQTLADFLRSLLNCNDN---------GRIIVARKKFSGQ 247
Query: 453 NWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSEL-------GVQFGTCLE 505
L L +F ++ + ++IL GTL P+ L ++F TC
Sbjct: 248 PEDAYLKFVMLCAEKIFLEITCDAYAVILAGGTLQPIEETRLRLFPNLPPSDIKFFTC-- 305
Query: 506 APHVIDVDLQVLTSVISTGPDNYPLNASYKTADGYKLMEKL----CN------------- 548
H++ + +L ++ GP + SY + + ++E+L CN
Sbjct: 306 -NHIVPPE-SILPIAVTRGPSGKAFDFSYSSRSSHTMIEELGRFLCNVVTTVPEGVVMFF 363
Query: 549 -----------RWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVV 597
W +G S+++ KK +F EPK + D E+ L Y +I SK
Sbjct: 364 ASYEYERFVYDAWAASGMISKISKKKHVFREPK--NSVDVEMTLNKYKEAIQSCSK---- 417
Query: 598 RKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKI---------------VVGIPFPN 642
S ++ GA LAV GKI +VG+P+P+
Sbjct: 418 -----------------SSQDTGVTGALLLAVVGGKISEGINFSDGMGRCVVMVGLPYPS 460
Query: 643 INDIQVSLKKKY-----------NDTYRSSK-----------NLL-----SGNEWYCNQA 675
+D++++ KY D SSK ++L G E+Y N
Sbjct: 461 PSDVELTETIKYIENISKPVLVGGDNSSSSKYDDECKLQPGFDILRKCNKGGREYYENLC 520
Query: 676 FRALNQAIGRCIRHRFDYGAIILLDERF 703
+A+NQ+IGR IRH DY A++L+D R+
Sbjct: 521 MKAVNQSIGRAIRHANDYAAMLLVDSRY 548
>gi|403338080|gb|EJY68268.1| hypothetical protein OXYTRI_11217 [Oxytricha trifallax]
Length = 779
Score = 110 bits (274), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 172/816 (21%), Positives = 318/816 (38%), Gaps = 197/816 (24%)
Query: 52 DGHCHALLESPTGTGKSLSLLCSTLAWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGF 111
D HA+LE PTGTGK++ LL L++ + K +L + + + E + L F
Sbjct: 9 DSEGHAILEMPTGTGKTVCLLSLILSYIKAKKPNFKLIYCTRTIVEMEKTLEELK----F 64
Query: 112 IPESQPSTIPPSTNGQTAQVAMNNKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVP 171
+ E + P + Q+ Q N +++ + +Q +Q ++ +
Sbjct: 65 VLEQREKDFP---SDQSHQQQFQNMTLEE-----------SKNQQNQDLNS------PIL 104
Query: 172 MAVLASRKHYCTNKYVR---DKENIDEECKLL---------LGDRNLG------------ 207
L+SR++ C + V D+E +D +C+ L L R
Sbjct: 105 ALCLSSRRNLCIHPEVSKDDDRERVDSKCRQLTASWVREDALQQRGGSSVFLNNDTSSKI 164
Query: 208 ----CPQFKNVHK-------------VRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYY 250
P +++HK ++ KG V+ +EDL G+ + C Y+
Sbjct: 165 MTNVIPDIEDLHKNMKLCAFYETFWNRADQFTMPKG----VYTLEDLRAFGKKHKMCPYF 220
Query: 251 AARSMADDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDE 309
AR A ++ Y+Y+++P I + ++ K I++ DE HNI++ +A S++I
Sbjct: 221 LARHFLLQANIIVYNYAYMLDPKISNLVSKELQKDCIVVFDECHNIDNACIEAFSLNISR 280
Query: 310 DVL---------LKLQMELEQVCSVNPMI--YQPLIEMTQDLVGWIERRKATLAKREFQH 358
L L+ ++ E+V S + + Y+ L+E LV E + L+++E
Sbjct: 281 KTLELASNNLRKLEDMVKEEKVSSTSRLQDEYKRLVE---GLVLGGENKGIQLSEKELLS 337
Query: 359 FFSCWTGDKALRELQEANISR-QCFPILLECATKAIKEATDTESELPHLSGMSVITLEGL 417
L+E +I + + F L +KE T + T +G
Sbjct: 338 --HPLLAQDVLKEAVPGSIRKAEHFINFLRRIIVCLKEELKTREVKIQTPLQLIYTFQGN 395
Query: 418 F----SSLTYFFSRNGSH-----------------VSDYQLALQKYIKRDS----KNPGG 452
+ SL + R S V+D+ L Y K S P
Sbjct: 396 YFLDQRSLKFAHDRLSSLMNTLQIAAVDEFNPINIVADFATLLSTYYKGFSVIIEPYPQD 455
Query: 453 NWTH--TLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVI 510
N + L +CL+ ++ K V ++I+TSGT+SP+ + L Q T + A ++I
Sbjct: 456 NLIYDPLLQFYCLDASIATKPVFNRFRNVIMTSGTISPIEIYPKMLDFQPKT-MRAFNII 514
Query: 511 DVDLQVLTSVISTGPDNYPLNASYK---------------------TADG-------YKL 542
V +++ G D +++ + DG YK
Sbjct: 515 LPRNAVQPLIVTKGVDQLQISSKFDERENQGNIRNYGNLLIELSSIVPDGIVCFFTSYKY 574
Query: 543 MEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRV 602
ME + +W E G ++ K +++E K ++FE +L
Sbjct: 575 MEHIIIKWDEMGILQKVRENKLIYIETK----DNFETIL--------------------- 609
Query: 603 KREGNNDLNTIESQENA--NKKGASFLAVCRGKIVVGIPF-------------PNINDIQ 647
+E+ + A N +GA F ++ RGK+ G+ F P N +
Sbjct: 610 ---------ALENYKQACDNGRGAVFFSIARGKVSEGVDFAGHYGRCVIMFGIPYQNTLS 660
Query: 648 VSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEER 707
+LK + + + N++ A R +Q +GR +R ++DYG +I D+R+
Sbjct: 661 RNLKARMQ--FLKENFGIRENDFLTFDAMRQCSQCVGRVLRSKYDYGLMIFADKRYSRSD 718
Query: 708 NRAHISKWLRKSIK---QYDSFDASLEGLKSFFRDV 740
+ W+R ++ Q S D +++ +FF+++
Sbjct: 719 KQDKFPIWIRNQLEARNQNISIDIAIQTANTFFKEM 754
>gi|119186659|ref|XP_001243936.1| conserved hypothetical protein [Coccidioides immitis RS]
Length = 757
Score = 110 bits (274), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 159/714 (22%), Positives = 293/714 (41%), Gaps = 133/714 (18%)
Query: 146 IFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEECKLLLGDRN 205
+ Y SRT S+I + ++E ++ KY + E+ R
Sbjct: 69 LIYCSRTMSEIEKALTELRELM-----------------KYREQQLGYTEDF------RA 105
Query: 206 LGCPQFKNVHKVRGHPSLQKGGCHE-------VHDIEDLVNVGQVVRGCSYYAARSMADD 258
LG KN+ HPS+++ V ++ L+ G+ + C Y++AR M
Sbjct: 106 LGLTSRKNLCL---HPSVRREKSEPSNLVPPGVFTLDGLIRYGEQHKQCPYFSARRMMPF 162
Query: 259 AQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQM 317
++ Y Y+++P I + ++ K I++ DEAHNI+++ ++ S+DI ED L K
Sbjct: 163 CNVIIYSYHYLLDPKIAERVSKELSKDCIVVFDEAHNIDNVCIESLSIDITEDSLRKAGR 222
Query: 318 ELEQVC-SVNPMIYQPLIEMTQDLVGWIE-RRKATLAKREFQHFFSCWTGDKALRELQEA 375
+ ++ M ++ ++ +E R+A A+ E Q + D L+E
Sbjct: 223 GANNLGHKIDEMKRSDAAKLQKEYEKLVEGLREADQAREEDQLMANPALPDDLLKEAVPG 282
Query: 376 NISR--------QCFPILLECATKAIKEATDTE-SELPHLSGMSVI-------------- 412
NI R + F L+ K + ++T S L HL ++ I
Sbjct: 283 NIRRAEHFVAFLKRFIEYLKTRMKVLHAISETPLSFLSHLKDLTYIERKPLRFCAERLTS 342
Query: 413 ---TLEGL-------FSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWC 462
TLE + + F + ++ + L L+ + + P L C
Sbjct: 343 LVRTLELMNIEEYRPLQEIATFATLVSTYEKGFLLILEPFESDTATVPNP----VLHFTC 398
Query: 463 LNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQ-VLTSVI 521
L+ A+ K V E S+I+TSGTLSP+ + LG F T L+ + + + + L ++
Sbjct: 399 LDAAIAIKPVFERFGSVIITSGTLSPLEMYPKMLG--FQTVLQESYSMTLARRSFLPMIV 456
Query: 522 STGPDNYPLNASYK---------------------TADG-------YKLMEKLCNRWRET 553
+ G D +++++K T DG Y ME + + W+
Sbjct: 457 TRGSDQAQISSAFKIRNDPGVVRNYGNLLLEFSRITPDGIVVFFPSYLYMESIISMWQGM 516
Query: 554 GQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTI 613
G + K + VE SQE + L+ Y + G ++ R K D +
Sbjct: 517 GILDSIWNYKLILVETP-DSQES-SLALETYRTACCNGRGAILLCVARGKVSEGIDFD-- 572
Query: 614 ESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYN-DTYRSSKNLLSGNEWYC 672
+ G R + +G+PF + + ++ + YR + +++
Sbjct: 573 ------HHYG-------RAVLCIGVPFQYTESPILKARLRFMLENYR-----IREDDFLS 614
Query: 673 NQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYD---SFDAS 729
A R Q +GR +R + DYG ++L D RFQ++RN+ + KW+ ++I + + S D +
Sbjct: 615 FDAMRHAAQCLGRVLRGKDDYGIMVLADRRFQKKRNQ--LPKWISQNILESETNLSTDMA 672
Query: 730 LEGLKSFFRDVKGWVGKKMFNGLENSDNDVDHVSSMDQCKEVTKQNTQELNKSD 783
+ KSF R + K G+ ++ + D +++ K ++ QE N+ D
Sbjct: 673 VATAKSFLRTMAQPFKAKDQEGI-STWSLADLERHLEKQKGEAEKKYQEANQRD 725
Score = 49.3 bits (116), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 7/88 (7%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+ + + V FPY + Y Q ++C + TLD GHC +LE P+GTGK++SLL +
Sbjct: 3 FFIDDLPVLFPYPRIYPEQYAYICDLKKTLDVG---GHC--VLEMPSGTGKTVSLLSLII 57
Query: 77 AWQQNCKLKNQLANISHSKPDTE-AVTD 103
A+QQ+ +L S + + E A+T+
Sbjct: 58 AYQQHYPSHRKLIYCSRTMSEIEKALTE 85
>gi|336382459|gb|EGO23609.1| hypothetical protein SERLADRAFT_349743 [Serpula lacrymans var.
lacrymans S7.9]
Length = 848
Score = 110 bits (274), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 148/317 (46%), Gaps = 51/317 (16%)
Query: 463 LNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGT----CLEAPHVIDV-DLQVL 517
LNP+ +F+DVA++S ++L GT+SP+ ++L F T H+I ++Q L
Sbjct: 540 LNPSTIFRDVADVSRCVVLAGGTMSPIQDVVNQLFAYFPTEKLSTFSCGHIIPASNIQAL 599
Query: 518 TSVISTGPDNYPLNASYK-------TADGYKLMEKLCN---------------------R 549
V+ GP L +Y+ A+ +++ LC+
Sbjct: 600 --VVGKGPRGGDLEFNYRGQSDKQMIAELGQIIFNLCSIVPGGLVVFFPSYSYLNVVKEE 657
Query: 550 WRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNND 609
W T + KK +F+EP S+ E VL+ Y + ++ + VR R +R G
Sbjct: 658 WGSTRMLEKFEGKKKVFMEPPDSSE--VEAVLREY----AVEARSSNVRP-RGRRAGAVL 710
Query: 610 LNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYNDTYRSSKNLL---- 665
I ++ + + LA R ++VG+PF N + + KY + + + +
Sbjct: 711 FAVIGAKLSEGLNFSDELA--RAVVIVGLPFANKTSPDLRERMKYANEMEARRGVKRNHG 768
Query: 666 ---SGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQ 722
+ +E Y N A+NQ+IGR IRHR D+ ++IL+D R++ +A + +W+ I
Sbjct: 769 EKDAASELYENMCMNAVNQSIGRAIRHRSDWASLILVDRRYRSSAIQAKLPRWIASGIMA 828
Query: 723 YDSFDASLEGLKSFFRD 739
++F +++ L +FFRD
Sbjct: 829 TETFGQTVKQLGTFFRD 845
Score = 79.0 bits (193), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 79/177 (44%), Gaps = 27/177 (15%)
Query: 146 IFYASRTHSQISQVISEYKKTA-------------------------YRVPMAVLASRKH 180
I+YASRTHSQ+SQ++ E +K Y+ L SRK
Sbjct: 186 IYYASRTHSQLSQILPELRKLKFKHSSPPRSNDDDDENDSQQDDQKYYKWRTVSLGSRKQ 245
Query: 181 YCTNKYVRDKE-NIDEECKLLLGDR-NLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLV 238
C N V+ K ++DE C+ L ++ + C L+ DIEDL
Sbjct: 246 LCINDAVKLKHGDLDERCRKLREEKADKRCEHLPGAEDELRMLELRDQILATPKDIEDLA 305
Query: 239 NVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNI 295
G+ C YY +R A+LV PY+ ++ R A+ +D+ I+++DEAHN+
Sbjct: 306 AAGRNALTCPYYGSRRAIPQAELVTLPYNLLLQRPAREALGIDLTDQIVVIDEAHNL 362
>gi|393243158|gb|EJD50674.1| DNA repair helicase [Auricularia delicata TFB-10046 SS5]
Length = 801
Score = 109 bits (273), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 75/226 (33%), Positives = 115/226 (50%), Gaps = 14/226 (6%)
Query: 91 ISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKKMTPTIFYAS 150
+ HS P + D F+PE +P+T +N A A ++ + I++AS
Sbjct: 140 LDHSPPSDDEDED------AFLPEDEPAT----SNSLAAWRARIVEDEPDPVCTKIYFAS 189
Query: 151 RTHSQISQVISEYKKTA-YRVPMAV-LASRKHYCTNKYV-RDKENIDEECKLLL-GDRNL 206
RTH+Q+SQ+ E KT R+ V LASRK+ C N + R +IDE C+ +L GD+
Sbjct: 190 RTHTQLSQLRVELLKTPDGRMKRVVPLASRKNLCINDELKRSGVDIDEGCRAMLSGDKGK 249
Query: 207 GCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPY 266
CP ++ + DIEDLV +GQ +R C Y+ +R AQ+V PY
Sbjct: 250 RCPYLPPPDELSQMLDFRDHILASPKDIEDLVTLGQELRTCPYFGSRRAVASAQIVTLPY 309
Query: 267 SYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVL 312
+ ++ R A +D+KG ++I+DEAHN+ D SV ++ L
Sbjct: 310 NLLLQKSAREATGIDLKGHVVIIDEAHNLIDTMLSIHSVALNLKTL 355
Score = 103 bits (258), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 148/330 (44%), Gaps = 63/330 (19%)
Query: 455 THTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSEL----GVQFGTCLEAPHVI 510
T L LNPA F+++ + +++L GT+SP++ F +L + HVI
Sbjct: 494 TLQLKYQLLNPAPHFQEIINEARAVVLAGGTMSPISVFEQQLLPFLPPERLASFACGHVI 553
Query: 511 DVDLQVLTSVISTGPDNYPLNASYK---------------------TADG-------YKL 542
+ + V+S P L +Y+ DG Y
Sbjct: 554 PRE-NLCALVLSKSPQGTSLTFNYEKRSDKTLMSDLGMVLLNLVRIVPDGMVVFFPSYAF 612
Query: 543 MEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSK---CAVVRK 599
+ + ++ +E+G W ++ A+KPLF EP GS E VL+ Y +I+ G+ AVV
Sbjct: 613 LATVQSQLKESGLWDKIGARKPLFTEPNDGSS--VEEVLREYGAAIASGASALLLAVVGA 670
Query: 600 KRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKY----- 654
K EG N + + R ++VG+P+ N+N ++ + ++
Sbjct: 671 KL--SEGLNFSD----------------GLARAVVLVGLPYANLNSPELKERMRFVREAA 712
Query: 655 NDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISK 714
T +++ +G E Y N RA+NQ++GR IRH+ D+ A+I +D R+ R RA +
Sbjct: 713 GPTKPGARD--AGMEMYENMCMRAVNQSVGRAIRHKGDWAALIFVDARYGSNRVRAKLPG 770
Query: 715 WLRKSIKQYDSFDASLEGLKSFFRDVKGWV 744
W+ + +D++ A+ L F+ KG V
Sbjct: 771 WISADLAVHDAYGAAAGQLVRFYNGKKGRV 800
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 37/56 (66%), Gaps = 5/56 (8%)
Query: 26 EFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQN 81
+FP+ PY QL M + + ++ ++ A+LESPTGTGK+LSL+CS L W ++
Sbjct: 17 QFPFPPYSIQLELMKHLYAAVEASK-----LAILESPTGTGKTLSLICSALQWLED 67
>gi|340514003|gb|EGR44274.1| DNA excision repair helicase [Trichoderma reesei QM6a]
Length = 783
Score = 109 bits (273), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 160/726 (22%), Positives = 288/726 (39%), Gaps = 133/726 (18%)
Query: 107 NGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKKMTPTIFYASRTHSQISQVISEYKK- 165
+ GG PS + + + VA +K+ + Y SRT S+I + + E +
Sbjct: 23 DAGGHCVLEMPSGTGKTVSLLSLIVAYQQHMPEKR---KLIYCSRTMSEIEKALVELQSL 79
Query: 166 TAYRVPMAV---------LASRKHYCTNKYVRDKEN---IDEECKLLLG-------DRNL 206
YR L SRK+ C + V+ +++ +D C+ L DR
Sbjct: 80 MKYRTEQLGYEEEFRGLGLTSRKNLCLHPSVKREKSGSIVDARCRSLTAGFVKEKKDRGE 139
Query: 207 G---CPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVF 263
C N+ + H + G V + L+ G+ + C Y+ AR M + +V
Sbjct: 140 NVDVCVYHDNLDLLEPHNLIPNG----VWSFDALLRYGEEHKQCPYFTARRMMEYCNVVI 195
Query: 264 CPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLKL----QME 318
Y Y+++P I + D K I++ DEAHNI+++ +A S DI ED + K Q
Sbjct: 196 FSYHYLLDPKIAERVSKDFSKDCIVVFDEAHNIDNVCIEALSTDITEDSIRKATRSAQHL 255
Query: 319 LEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRELQEANIS 378
++ + + L + LV + R A +++E + D L+E NI
Sbjct: 256 ERRIAEMRETDQEQLQNEYEKLVQGL--RAADESRQEDAFMANPALPDDLLKEAVPGNIR 313
Query: 379 R--------QCFPILLECATKAIKEATDTE-SELPHLSGMSVI----------------- 412
R + F L+ K + ++T S L HL + I
Sbjct: 314 RAEHFVAFLKRFLEYLKTRMKVRQVISETPPSFLAHLKEHTFIEKKPLRFCAERLTSLVR 373
Query: 413 TLE-------GLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNP 465
TLE + F + ++ + L L+ Y ++ P TL CL+
Sbjct: 374 TLELTNIEDYQALQEVATFATLVATYEKGFLLILEPYESDTAEVPNP----TLHFTCLDA 429
Query: 466 AVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQ-VLTSVISTG 524
A+ + V E S+I+TSGT+SP+ + L F T ++ + + + + L +++ G
Sbjct: 430 AIAIRPVFERFYSVIITSGTISPLEMYPKML--DFATVIQESYSMTLARKSFLPMIVTRG 487
Query: 525 PDNYPLNASYK---------------------TADG-------YKLMEKLCNRWRETGQW 556
D +++S++ T DG Y ME + + W+ G
Sbjct: 488 SDQASISSSFQVRNEPSVVRNYGSLLTEFAKITPDGMVVFFPSYLYMESIISMWQGMGIL 547
Query: 557 SRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQ 616
+ K + VE + + L+ Y + G ++ R K D +
Sbjct: 548 DEVWKYKLILVETPDAQETS--LALETYRTACCNGRGAILLCVARGKVSEGIDFD----- 600
Query: 617 ENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKY-NDTYRSSKNLLSGNEWYCNQA 675
++ G R + +G+PF + + ++ +TYR + N++ A
Sbjct: 601 ---HQYG-------RTVLCIGVPFQYTESRILKARLEFLRETYR-----IKENDFLSFDA 645
Query: 676 FRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYD---SFDASLEG 732
R Q +GR +R + DYG ++L D RFQ++RN+ + KW+ + + D S D ++
Sbjct: 646 MRHAAQCLGRVLRGKDDYGVMVLADRRFQKKRNQ--LPKWINQGLSDADTNLSTDMAVSA 703
Query: 733 LKSFFR 738
+ F +
Sbjct: 704 ARRFLK 709
>gi|336369679|gb|EGN98020.1| hypothetical protein SERLA73DRAFT_56211 [Serpula lacrymans var.
lacrymans S7.3]
Length = 859
Score = 109 bits (272), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 148/317 (46%), Gaps = 51/317 (16%)
Query: 463 LNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGT----CLEAPHVIDV-DLQVL 517
LNP+ +F+DVA++S ++L GT+SP+ ++L F T H+I ++Q L
Sbjct: 551 LNPSTIFRDVADVSRCVVLAGGTMSPIQDVVNQLFAYFPTEKLSTFSCGHIIPASNIQAL 610
Query: 518 TSVISTGPDNYPLNASYK-------TADGYKLMEKLCN---------------------R 549
V+ GP L +Y+ A+ +++ LC+
Sbjct: 611 --VVGKGPRGGDLEFNYRGQSDKQMIAELGQIIFNLCSIVPGGLVVFFPSYSYLNVVKEE 668
Query: 550 WRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNND 609
W T + KK +F+EP S+ E VL+ Y + ++ + VR R +R G
Sbjct: 669 WGSTRMLEKFEGKKKVFMEPPDSSE--VEAVLREY----AVEARSSNVRP-RGRRAGAVL 721
Query: 610 LNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYNDTYRSSKNLL---- 665
I ++ + + LA R ++VG+PF N + + KY + + + +
Sbjct: 722 FAVIGAKLSEGLNFSDELA--RAVVIVGLPFANKTSPDLRERMKYANEMEARRGVKRNHG 779
Query: 666 ---SGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQ 722
+ +E Y N A+NQ+IGR IRHR D+ ++IL+D R++ +A + +W+ I
Sbjct: 780 EKDAASELYENMCMNAVNQSIGRAIRHRSDWASLILVDRRYRSSAIQAKLPRWIASGIMA 839
Query: 723 YDSFDASLEGLKSFFRD 739
++F +++ L +FFRD
Sbjct: 840 TETFGQTVKQLGTFFRD 856
Score = 80.5 bits (197), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 79/173 (45%), Gaps = 23/173 (13%)
Query: 146 IFYASRTHSQISQVISEYKKTA---------------------YRVPMAVLASRKHYCTN 184
I+YASRTHSQ+SQ++ E +K Y+ L SRK C N
Sbjct: 203 IYYASRTHSQLSQILPELRKLKFKHSSNDDDDENDSQQDDQKYYKWRTVSLGSRKQLCIN 262
Query: 185 KYVRDKE-NIDEECKLLLGDR-NLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQ 242
V+ K ++DE C+ L ++ + C L+ DIEDL G+
Sbjct: 263 DAVKLKHGDLDERCRKLREEKADKRCEHLPGAEDELRMLELRDQILATPKDIEDLAAAGR 322
Query: 243 VVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNI 295
C YY +R A+LV PY+ ++ R A+ +D+ I+++DEAHN+
Sbjct: 323 NALTCPYYGSRRAIPQAELVTLPYNLLLQRPAREALGIDLTDQIVVIDEAHNL 375
>gi|340059127|emb|CCC53502.1| putative helicase-like protein [Trypanosoma vivax Y486]
Length = 984
Score = 109 bits (272), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 101/378 (26%), Positives = 170/378 (44%), Gaps = 76/378 (20%)
Query: 22 GIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ-- 79
G P++PYG Q + + ++L A A +E PTG GK+++LL S L +Q
Sbjct: 10 GKTYHMPFEPYGVQKEMIKVINASLLSAPSHAPI-AAVEVPTGCGKTVALLSSVLQYQAA 68
Query: 80 ----------------------------------QNCKLKNQLANISHSKPD-TEAVTDP 104
+C+ + + H+K D + A TD
Sbjct: 69 LGKLSQPELERHMRERRCRSMLAASPSMAASNLIHSCRCECNATAVCHNKKDESSADTDA 128
Query: 105 LANGGGFIPESQPSTIPPSTNGQTAQVAMNN--KNVKKKMTP---TIFYASRTHSQISQV 159
+ + P + + G+ +V N ++++ P TIFY +RTH+Q+ Q
Sbjct: 129 VIAEERWRPPQLFFKMFRTQPGKRLRVETENPVSELRRQHDPPPCTIFYVTRTHAQVKQA 188
Query: 160 ISEYKKT--AYRVPMAVLASRKHYCTNKYVR----------DKENIDEECKLLLGDRNLG 207
+ E +K ++ M +L SR YC N+ V+ + N+ E C D+ +
Sbjct: 189 VGELRKLRDLDKLKMNILGSRAWYCINQKVQSARANKTLPVEGNNLGEVC-----DKLVS 243
Query: 208 CPQFKNVHKVRGHPS------LQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQL 261
Q + VH + L++G +V DIEDLV+ G ++ C YYAAR + A +
Sbjct: 244 LGQCEAVHTYASLANRAITRPLRQGCAEKVWDIEDLVSEGVGMQSCPYYAARDLVFFAHV 303
Query: 262 VFCPYSYIINPVIRG--AMEVDIK-GAILILDEAHNIEDIARDAGSVDIDEDVLLKLQME 318
F Y Y+++P+IR ME +K AI++ DEAHN+ + ++A S++ + L + E
Sbjct: 304 NFATYQYLLDPIIRHECKMEAALKNNAIVVFDEAHNVPHVCQEALSLETTTETLQLVISE 363
Query: 319 LEQVCSVNPMIYQPLIEM 336
LE P+I+ P + M
Sbjct: 364 LE------PLIH-PEVSM 374
Score = 104 bits (260), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 138/318 (43%), Gaps = 53/318 (16%)
Query: 457 TLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCL--EAPHVIDVDL 514
T+++ CL+ +V F+ + ++L SGTL+P ELGV + + E HV+
Sbjct: 566 TIAVQCLDGSVAFRYLLASVHRVVLASGTLAPFRQLGQELGVPPTSMVTYEGGHVVGKHQ 625
Query: 515 QVLTSVISTGPDNYPLNASYKTADGYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQ 574
++ TG D PL +Y+T +E L R GG
Sbjct: 626 YRFVALTRTG-DATPLQCTYETFRSNSFVESLVATLIRLIDQVR-----------TGG-- 671
Query: 575 EDFEIVLKHYYNSISQGSKCAV-------VRKK----RVKREGNNDLNTI-----ESQEN 618
+ L +Y+ + GS+ A+ R++ REG ND++ + E Q++
Sbjct: 672 --VLLFLPNYHVMRAVGSRLALHYERVMCARRRDAANHAAREGGNDIHLVPHIFLECQKS 729
Query: 619 ------------ANKKGASFLA-VCRGKIVVGIPFPN-----INDIQVSLKKKYNDTYRS 660
A G + LA V R K+ GI F + + + V L+ T +
Sbjct: 730 EEFSLQLGKFQAATAAGPAVLASVFRAKVGEGINFADHMARLVVCVGVPLRPLKLWTVAA 789
Query: 661 SKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSI 720
+ SG EWY A R +NQA GRCIRH DYGA++LLD RF + +S W R+ +
Sbjct: 790 QRQY-SGEEWYITDAIRTVNQAAGRCIRHLHDYGAVVLLDGRFDHPGIQQLLSGWCRREL 848
Query: 721 KQYDSFDASLEGLKSFFR 738
K Y + E L F+R
Sbjct: 849 KVYHALGPLEEDLCQFYR 866
>gi|449664165|ref|XP_002163452.2| PREDICTED: LOW QUALITY PROTEIN: TFIIH basal transcription factor
complex helicase XPD subunit-like [Hydra magnipapillata]
Length = 759
Score = 108 bits (271), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 160/728 (21%), Positives = 284/728 (39%), Gaps = 155/728 (21%)
Query: 122 PSTNGQTAQ-VAMNNKNVKKK--MTPTIFYASRTHSQISQV-------ISEYKK-TAYRV 170
PS G+T +++ +K++ Y SRT +I +V I YKK T +
Sbjct: 43 PSGTGKTVSLISLIVAYIKERPHHLSKFVYCSRTVPEIEKVYNFXXLLIEFYKKETGQDL 102
Query: 171 PMAVLA--SRKHYCTN---KYVRDKENIDEECKLLLG---------DRNLGCPQFKNVHK 216
M LA SRK+ C + K ++D + +D +C L D+ QF
Sbjct: 103 KMVGLALSSRKNLCIHPEVKNLKDGKQVDGKCHTLTASFVRTRYQADKQTPVCQFYENFD 162
Query: 217 VRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRG 276
G G ++++EDL G+ + C Y+ AR A +V Y Y+++P I
Sbjct: 163 SFGREEPLPSG---IYNLEDLKQYGEEIGCCPYFMARHAISLANIVVYSYHYLLDPKIAD 219
Query: 277 AMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQVCSVNPMIYQPLIE 335
+ K + ++ DEAHNI+++ D+ +V I+ L K ++++ + I+
Sbjct: 220 LVSKSFPKSSAVVFDEAHNIDNVCIDSMTVHINRRTLDKCHSNIDKLAE-----HVQRIK 274
Query: 336 MT--QDLVGWIER-----RKATLAKREFQHFFSCWTGDKALRELQEANISR-QCFPILLE 387
MT + L G ER R+A A+ Q+ + D L E NI + + F +
Sbjct: 275 MTDAKKLNGEYERLVQGLREAQEARETDQYLGNPVLPDAVLEEAVPGNIRQAEHFIAFMR 334
Query: 388 CATKAIKEATDTES--------------------------------------ELPHLSGM 409
+ +K + ELP ++
Sbjct: 335 RFVEYLKTRLRIQHVVSETPPSFLQHIHQQVCIERKPLRFCSERLRSLLNTLELPDITDY 394
Query: 410 SVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVF 469
S ++L F++L +S+ + L ++ + + P + CL+ +V
Sbjct: 395 SGLSLVANFATLVSTYSKG------FVLIIEPFDDQTPTIPNP----IIHFCCLDASVAI 444
Query: 470 KDVAELSLSIILTSGTLSPMNSFSSELGVQ------FGTCLEAPHVIDVDLQVLTSVIST 523
K V E S+++TSGTLSP++ + L Q F L V+ + + S
Sbjct: 445 KPVFERFQSVVITSGTLSPVDMYPKLLDFQPVNMSTFTMTLARQCVLPI-------ICSK 497
Query: 524 GPDNYPLNASYKTAD----------------------------GYKLMEKLCNRWRETGQ 555
G D +++S++T D Y ME + + W + G
Sbjct: 498 GNDQVAISSSFQTRDDMAVIRNYGNLLVEMSASVPDGIACFFVSYLYMETVVSIWHDQGI 557
Query: 556 WSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIES 615
S + K LF+E + G + + L +Y + G ++ R K D +
Sbjct: 558 ISNIQKNKLLFIETQDGPET--ALALYNYQKACENGRGAILLSVARGKVSEGIDFD---- 611
Query: 616 QENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQA 675
+ G R I+ GIP+ Q + K + R N + N++ A
Sbjct: 612 ----HHYG-------RAVIMFGIPYVY---TQSRILKARLEFLRDQFN-IRENDFLTFDA 656
Query: 676 FRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYD---SFDASLEG 732
R Q +GR +R + DYG + D+RF + + + KW+++ +K + S D +++
Sbjct: 657 MRHAAQCVGRAMRGKTDYGIMCFADKRFSKADKKGKLPKWIQEHLKPCNCNLSIDEAVQV 716
Query: 733 LKSFFRDV 740
K F R +
Sbjct: 717 SKRFLRQM 724
>gi|50293749|ref|XP_449286.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528599|emb|CAG62260.1| unnamed protein product [Candida glabrata]
Length = 775
Score = 108 bits (271), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 173/796 (21%), Positives = 315/796 (39%), Gaps = 151/796 (18%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+ + + V FPY + Y Q +M + TLD +++LE P+GTGK++SLL T+
Sbjct: 3 FFIDDLPVLFPYPKIYPEQYQYMRDIKRTLD-----AGGNSILEMPSGTGKTVSLLSLTI 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNK 136
A+Q + ++ S + + E L N + + G T++ K
Sbjct: 58 AYQMHYPEHRKIIYCSRTMSEIEKALVELENLMDYRAKELGFKEEFRGLGLTSR-----K 112
Query: 137 NVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE 196
N+ H ++S+ S ++ + TN + K D E
Sbjct: 113 NLC------------LHPEVSKERSG----------TIVDEKCRRMTNGQAKKKLEEDPE 150
Query: 197 CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMA 256
+ L C +N++++ L G V E L+ + C Y+ R M
Sbjct: 151 ANVEL------CDYHENLYQLDVENYLPNG----VFSFEKLIKYCEQKVLCPYFIVRRMI 200
Query: 257 DDAQLVFCPYSYIINPVI--RGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVL-- 312
++ Y Y+++P I R + EV K +I+I DEAHNI+++ ++ S+D+ DVL
Sbjct: 201 SMCNIIIYSYHYLLDPKIAERVSHEVS-KDSIVIFDEAHNIDNVCIESLSLDLTNDVLRK 259
Query: 313 --------------------LKLQMELEQVC------SVNPMIYQPLIE---MTQDLV-- 341
KLQ E E++ + +P +E + QDL+
Sbjct: 260 ATKGANTLNERIAEARQVDARKLQDEYEKLVQGLHAEDIMTQTEEPFVETPVLPQDLLKE 319
Query: 342 ---GWIERRK--ATLAKREFQHFFSCWTGDKALRELQEANIS-RQCFPILLECATKAIKE 395
G I R + + KR ++ T K L + E S Q L K ++
Sbjct: 320 AIPGNIRRAEHFISFLKRLIEYL---KTRMKVLHVISETPRSFLQHLKQLTFIDRKPLRF 376
Query: 396 ATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWT 455
++ S L + + + F + ++ + L ++ Y ++ P
Sbjct: 377 CSERLSLLVRTLEIEDVEEFAALKDIATFATLVSTYEDGFTLIIEPYEIENAAVPNPIMR 436
Query: 456 HTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQ 515
T CL+ ++ K V E S+I+TSGT+SP++ + L F T L+ + + + +
Sbjct: 437 FT----CLDASIAIKPVFERFSSVIITSGTISPLDMYPRMLN--FETVLQKSYSMSLAKK 490
Query: 516 -VLTSVISTGPDNYPLNASYK---------------------TADG-------YKLMEKL 546
L +++ G D +++ ++ T DG Y ME +
Sbjct: 491 SFLPMIVTKGSDQVAISSRFEIRNDPSIVRNYGSMLVEFAKITPDGMVVFFPSYLYMESI 550
Query: 547 CNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREG 606
+ W+ G + K + VE + + L+ Y + S G ++ R K
Sbjct: 551 VSMWQTMGILDEVWKHKLILVETPDAQETS--LALETYRKACSNGRGAILLSVARGKVSE 608
Query: 607 NNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKY-NDTYRSSKNLL 665
D + ++ G R +++GIPF + + ++ + YR +
Sbjct: 609 GIDFD--------HQYG-------RTVLMIGIPFQYTESRILKARLEFMRENYR-----I 648
Query: 666 SGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYD- 724
N++ A R Q +GR +R + DYG +IL D RF +RN+ + KW+ + + + D
Sbjct: 649 RENDFLSFDAMRHAAQCLGRVLRGKDDYGVMILADRRFSRKRNQ--LPKWIAQGLSEADL 706
Query: 725 --SFDASLEGLKSFFR 738
S D ++ K F R
Sbjct: 707 NLSTDMAISNAKQFLR 722
>gi|312375220|gb|EFR22635.1| hypothetical protein AND_14424 [Anopheles darlingi]
Length = 894
Score = 108 bits (271), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 104/197 (52%), Gaps = 23/197 (11%)
Query: 146 IFYASRTHSQISQVISEYKKT--AYRVPMAVLASRKHYCTNKYVRD-KEN--IDEECKLL 200
I + SRTHSQ+SQV+ E K T A + +A LASR+ C N VR K N I+E C L
Sbjct: 204 IVFCSRTHSQLSQVVGEVKGTQHAKELRLASLASRQSLCINPDVRKLKSNTLINERCLEL 263
Query: 201 L------------GDRNLGCPQFKNV------HKVRGHPSLQKGGCHEVHDIEDLVNVGQ 242
L G+ N G + + + + R L+ EV DIEDLV G+
Sbjct: 264 LKKGGKGKAVNEGGEENSGTKKRRKIAQSCPYYNQRAIEGLKNVTLFEVPDIEDLVKAGK 323
Query: 243 VVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDA 302
+ C YYA+R+ DAQL+ PY I++ R +D+ G+ILI+DEAHN+ D
Sbjct: 324 REKACPYYASRAAVPDAQLLMVPYQLILHRRTRQQSGIDLHGSILIIDEAHNLLDTIAAI 383
Query: 303 GSVDIDEDVLLKLQMEL 319
S ++ + L +++M+L
Sbjct: 384 HSQELTHEQLQQVKMQL 400
Score = 84.0 bits (206), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 98/208 (47%), Gaps = 23/208 (11%)
Query: 540 YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRK 599
Y+ +E+ C R ++G +R+ +K +F EP+ Q E +L Y +Q +K
Sbjct: 654 YEYLEQFCKRLEDSGNRARMEERKRIFREPRTTGQ--VERILSEY----AQAAKSTT--- 704
Query: 600 KRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYND--- 656
G L+ + + + + L C +V+G+P+PN ++ + +Y D
Sbjct: 705 ------GALLLSVVGGKLSEGLNFSDELGRC--VVVIGLPYPNRTSPELVERMRYLDRTL 756
Query: 657 TYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERF---QEERNRAHIS 713
+S +GNE+Y N +A+NQ IGR +RH DY A++LLD R+ E R +
Sbjct: 757 AKQSPTANTAGNEYYENLCMKAVNQCIGRAVRHIRDYAAVVLLDVRYCTGTESSIRRKLP 816
Query: 714 KWLRKSIKQYDSFDASLEGLKSFFRDVK 741
W+ + D + + L FFRD K
Sbjct: 817 SWISDQMVCADRYGQAHGSLVKFFRDHK 844
Score = 49.3 bits (116), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 22 GIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
G + FP+ PY QL FM + L Q G + ESPTGTGKSLSL C +L W
Sbjct: 16 GEEFAFPFPPYEIQLDFMKSLYGVL---QSGGI--GIFESPTGTGKSLSLTCGSLTW 67
>gi|399218456|emb|CCF75343.1| unnamed protein product [Babesia microti strain RI]
Length = 824
Score = 108 bits (270), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 161/664 (24%), Positives = 279/664 (42%), Gaps = 141/664 (21%)
Query: 146 IFYASRTHSQISQVISEYKKTAYR----VPMAVLASRKHYCTNKYVRDKENIDEECKLLL 201
I SRTH+Q++Q I E KK + V A+ +SR++ C NK++ E LL
Sbjct: 163 IIICSRTHTQLNQFIKEVKKLDPQLYCDVRFAIASSRQYLCVNKHILSTSKGSVE---LL 219
Query: 202 GDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIE-DLVNVGQVVRGCSYYAARSMADDAQ 260
D C + K K P ++ + + E L+ + C YYA++ A
Sbjct: 220 NDE---CRRSKCQFKSNITPIIESTISYPLDQSELRLIGSENCLSSCPYYASKHTIKYAD 276
Query: 261 LVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDI---DEDVLL-KLQ 316
++ PY++IIN +R + + I ILI DEAHN+ D ++ SV D +LL +++
Sbjct: 277 VILAPYNFIINKSLRESSGLKIDHNILIFDEAHNLGDAITNSTSVSFTTYDSLILLEQIR 336
Query: 317 MELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRELQEAN 376
M + S+ P + T+ +G I + +T K + + +
Sbjct: 337 MYTNKYNSILP-------QDTKFNLGTITK------------LLESFTNIKICVDEKVID 377
Query: 377 ISRQCFPILLEC--ATKAIKEATD--TESELPHLSGMSVITLEGLFSSLTYFFSRNGSHV 432
IS+ L+EC AT +I D T SE+ L S EGL+S L Y +++ S +
Sbjct: 378 ISQ----FLVECGIATLSIHSIIDFLTNSEIC-LKIRSY--AEGLYSKLEYNYNKETSII 430
Query: 433 SDYQLALQKYI--KRDSKNPGGNWTHT-----------------LSLWCLNPAVVFKDVA 473
++ L + +D K + T + ++ L+ F ++
Sbjct: 431 YMFREFLNCILLCTKDDKIIISHQNETPYYEGLVSKFINDTYLKIEIYSLSIFDSFSEII 490
Query: 474 ELSLSIILTSGTLSPMNSF-----SSELGVQFGTCLEAPHVIDVDLQVLTSVISTGP-DN 527
+ S++L SGTL+P++ + S++ V+ P + +D ++ ++IST P +N
Sbjct: 491 TSARSVMLVSGTLTPIHEYLMMIPSTKDKVRI---FRNPGIFTID-KIYCNIISTTPSNN 546
Query: 528 YPLNASYKTADGYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNS 587
LN +++ ME LC V P+G H + +
Sbjct: 547 NVLNFTHEKRTDRNTMEGLCQIISNLS-----------LVVPEGLLVFFTSFNYMHSFLT 595
Query: 588 ISQGSKCAVVR--------KKRVKREGNNDLNTIESQENANKKGASFLAV---------- 629
G++ + + KK + EG N +E + GA A+
Sbjct: 596 FGLGNRYKMNQFDGPLSSLKKNIFIEGTTP-NLMEQYTKSAINGAVLFAIFGAKFSEGID 654
Query: 630 -----CRGKIVVGIPFPNINDIQVSLKKKYNDTYR-----------------SSKNLLSG 667
R I++G+P+P + ++ LK++Y YR S N+L+
Sbjct: 655 FSDHLARAIILIGLPYPPESS-KLKLKEQY---YRIKSQSTIGSRTTQIDLSSQLNILNI 710
Query: 668 NEWYCNQA-----------FRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWL 716
N+ + F+ +NQAIGR IRH DY AIIL+D R+ ++ N + +S+ +
Sbjct: 711 NDIKASLMTETVNLRKIICFKTINQAIGRAIRHINDYAAIILIDNRYLQQSNISFLSQNV 770
Query: 717 RKSI 720
KS+
Sbjct: 771 YKSL 774
>gi|307191862|gb|EFN75286.1| Probable ATP-dependent RNA helicase DDX11 [Harpegnathos saltator]
Length = 862
Score = 108 bits (270), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 149/316 (47%), Gaps = 57/316 (18%)
Query: 458 LSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLE------APHVID 511
+ LNPA F D+ E + S++L GT+ PM+ F +L + G ++ HVI
Sbjct: 562 IKFLLLNPAAHFHDIVEDARSVVLAGGTMEPMSEFIDQLFLMAGATIDRIMTFSCDHVIP 621
Query: 512 VDLQVLTSVISTGPDNYPLNASYKTADGYKLMEKL-------CN---------------- 548
+ ++++V+ GP S+ KL+++L CN
Sbjct: 622 KE-NIISNVVMRGPTGIEFEFSFHNRQDTKLLDELGRTLINLCNIVPAGVIVFFPSYKFE 680
Query: 549 -----RWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQ-GSKCAVVRKKRV 602
++G S+++AKK ++ EPK SQ ++L Y +SI S C
Sbjct: 681 DTVFKHLSKSGVISKISAKKCIYREPKLASQ--VSVILDQYAHSIKNPQSPC-------- 730
Query: 603 KREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKY-NDTYRSS 661
G+ + + + + + L C IVVG+P+PNI +++ K KY N+ +
Sbjct: 731 --NGSLLFSVVGGKLSEGLNFSDDLGRCV--IVVGLPYPNIKSLELQEKMKYLNENVKPD 786
Query: 662 KNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIK 721
+G+++Y N +A+NQ IGR +RH DY ++LLD+R+ + + +W+++S+K
Sbjct: 787 ----AGSKFYENSCMKAVNQCIGRSVRHINDYSTVVLLDKRYCHKIKV--LPQWIQRSVK 840
Query: 722 QYDSFDASLEGLKSFF 737
+SF + + + FF
Sbjct: 841 INESFGSVISSIAKFF 856
Score = 91.3 bits (225), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 90/171 (52%), Gaps = 24/171 (14%)
Query: 146 IFYASRTHSQISQVISEYKKTAYRVPMAV--LASRKHYCTNKYVRDKEN---IDEECKLL 200
IF+ SRTHSQ++Q + E +++ Y ++V L+SR++YC NK V+ ++ I+E C L
Sbjct: 199 IFFCSRTHSQLTQFVHELQRSPYSQDISVVPLSSRQNYCINKNVKKLKHVSLINETCLQL 258
Query: 201 LGDRNL--------------GCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRG 246
+ GCP K+ L + DIE++V GQ
Sbjct: 259 QRKKTTVKKEKDLKKSKTASGCPFIPGDQKL-----LMAEVLTNIQDIEEIVQKGQENNT 313
Query: 247 CSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIED 297
C YY +R + QL+ PY+ I++ R ++ +D+K ++LI+DEAHN+ D
Sbjct: 314 CPYYGSRKSVQNGQLILVPYNSILHRNTRISLGIDLKESVLIIDEAHNLLD 364
Score = 46.2 bits (108), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 29/52 (55%), Gaps = 5/52 (9%)
Query: 27 FPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
FP+ Y Q FM + + L+ G L ESPTGTGKSLSL+C L W
Sbjct: 9 FPFPAYEIQKQFMKELYNCLE-----GGKLGLFESPTGTGKSLSLICGALKW 55
>gi|356509501|ref|XP_003523486.1| PREDICTED: Fanconi anemia group J protein homolog [Glycine max]
Length = 111
Score = 108 bits (270), Expect = 2e-20, Method: Composition-based stats.
Identities = 58/92 (63%), Positives = 66/92 (71%), Gaps = 6/92 (6%)
Query: 118 STIPPSTNGQTAQVAMNNKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLAS 177
S IP T Q+ +N K KKK PTI+YASRTHSQISQV+ E +KTAYRVPMAVLA
Sbjct: 26 SEIPDHT-----QIEINKKQ-KKKEAPTIYYASRTHSQISQVVRELRKTAYRVPMAVLAW 79
Query: 178 RKHYCTNKYVRDKENIDEECKLLLGDRNLGCP 209
RKH CT K + KENI +ECKLLL D+ GCP
Sbjct: 80 RKHCCTTKNIIGKENIYDECKLLLKDQATGCP 111
>gi|170585544|ref|XP_001897542.1| DEAD_2 family protein [Brugia malayi]
gi|158594849|gb|EDP33426.1| DEAD_2 family protein [Brugia malayi]
Length = 794
Score = 108 bits (270), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/175 (37%), Positives = 100/175 (57%), Gaps = 15/175 (8%)
Query: 140 KKMTPTIFYASRTHSQISQVISEYKKTAYR-VPMAVLASRKHYCTNKYVRDKENIDEE-- 196
+ + P I YASRTHSQ+ QVI E KT Y+ + LASR C N V + N +
Sbjct: 10 RSLYPKILYASRTHSQLVQVIRELNKTTYKDIKTVTLASRDXLCINDKVMKENNSHVKSL 69
Query: 197 -CKLLLGDRNLGCPQFKNVHKVRGHPS-----LQKGGCHEVHDIEDLVNVGQVVRGCSYY 250
C+ L+ R CP F N ++ + PS K G V DIE++++V + + C Y+
Sbjct: 70 MCRNLI--RKHRCP-FYNFYE-KADPSTLDLLYSKNGL--VPDIEEVISVSRKHKYCPYF 123
Query: 251 AARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSV 305
+RSM ++A L+ PY+YI++P +R + +KG I+I DEAHN+E + ++ SV
Sbjct: 124 RSRSMYENADLILLPYNYIVDPSLRYKHNIQLKGNIVIFDEAHNLESVCEESTSV 178
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 69/125 (55%), Gaps = 10/125 (8%)
Query: 622 KGASFL-AVCRGKIVVGIPFPNINDIQVSLKKKYNDTYRS-------SKNLLSGNEWYCN 673
+G FL + RG IV+GIP+ D ++ LK+++ R KN+ S +EWY
Sbjct: 459 EGIDFLDSESRGVIVIGIPYAPTMDPRIELKRQFLTKQRMVVVKQELRKNI-SADEWYQV 517
Query: 674 QAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGL 733
+A R++NQ+IGR +RH+ D+G +IL D RF ++ S W+R +K Y +
Sbjct: 518 EAIRSVNQSIGRVLRHKNDFGVVILADSRFCSMSSKWFPS-WMRGCLKNYQDISDFEDEC 576
Query: 734 KSFFR 738
K FF+
Sbjct: 577 KQFFK 581
Score = 53.5 bits (127), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 457 TLSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQ 515
TL+ WC +P+V + + S+I+TSGTLSP++SF + LG+ F LE H +VD Q
Sbjct: 375 TLNYWCFSPSVAMWYLHSCGVRSVIVTSGTLSPLDSFINNLGISFPIALENQHAANVD-Q 433
Query: 516 VLTSVISTGPDNYPLNASY 534
+L + I + L ++
Sbjct: 434 ILCARIRSSQSGIDLCGTF 452
>gi|149029745|gb|EDL84902.1| rCG63103 [Rattus norvegicus]
Length = 396
Score = 108 bits (270), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 140/329 (42%), Gaps = 77/329 (23%)
Query: 457 TLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSEL----GVQFGTCLE--APHVI 510
+L LNPAV F V + ++++ GT+ P++ F +L GV+ +E HVI
Sbjct: 93 SLKFLLLNPAVHFAQVVKECRALVIAGGTMQPVSDFREQLLACSGVEASRVVEFSCGHVI 152
Query: 511 DVDLQVLTSVISTGPDNYPLNASYKTADGYKLMEK-------LCN--------------- 548
D +L +I +GP N L +Y+ + ++ME+ LCN
Sbjct: 153 PPD-NILPLIICSGPSNQQLEFTYQRRELPQMMEETGRILCNLCNVVPGGMVCFLPSYEY 211
Query: 549 ------RWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRV 602
W +TG +RL+ +K +F EPK SQ E VL Y I+ C
Sbjct: 212 LRQVHAHWDKTGLLARLSVRKKIFQEPKRASQ--VEQVLTAYSTCIA---SC-------- 258
Query: 603 KREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQ 647
S + GA L+V GK ++VG+P+PNI +
Sbjct: 259 ------------SHSEGHLTGALLLSVVGGKMSEGINFSDDLGRCVVMVGMPYPNIKSPE 306
Query: 648 VSLKKKYNDTY--RSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQE 705
+ K Y D R+ G N +A+NQ+IGR IRH+ D+ +I+LLD R+
Sbjct: 307 LQEKMAYLDQTIPRTHGQPPPGTVLIENLCMKAINQSIGRAIRHQKDFASIVLLDHRYAR 366
Query: 706 ERNRAHISKWLRKSIKQYDSFDASLEGLK 734
A + W+R ++ +F + ++
Sbjct: 367 PSILAKLPAWIRDRVEVKATFGPAFAAMR 395
>gi|407853226|gb|EKG06303.1| helicase-like protein, putative [Trypanosoma cruzi]
Length = 956
Score = 108 bits (270), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 97/355 (27%), Positives = 160/355 (45%), Gaps = 55/355 (15%)
Query: 23 IQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNC 82
+ + P++PY Q M + + L + A +E PTG GK+L+LL S L +Q
Sbjct: 11 VAYDMPFEPYPVQREMMHTITNCLQSSSPILPV-AAVEVPTGCGKTLALLSSVLRYQATL 69
Query: 83 K------LKNQLAN-----ISHSKPDTEAVTDPLANGGGFIPESQPSTIPP--------- 122
+ L+ + + S P + + LA+ G S+ IP
Sbjct: 70 EELTPQELEQHMRYRRWRPAATSLPKSLLDEETLADSGRSKSNSKGKRIPDDAVDDEEKW 129
Query: 123 -----------STNGQTAQVAMNNK--NVKKKMTP---TIFYASRTHSQISQVISEYKKT 166
+ N + +V M+ +++++ P ++FY +RTH Q+ Q + E +K
Sbjct: 130 RVPTEFFKQFRANNSKRLRVEMDGTPWSLRRQHKPPSCSVFYVTRTHLQVRQAVGELRKL 189
Query: 167 --AYRVPMAVLASRKHYCTNKYVR----------DKENIDEECKLL--LGDRNLGCPQFK 212
+R+ M +L SR+ YC N V + N+ E C L LG C
Sbjct: 190 HGLHRLKMNILGSRERYCINSTVLKARANKTLPVEGNNLGEICDKLVSLGQCEAVCNYGV 249
Query: 213 NVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINP 272
+ HP L +G +V D+EDLV G + C YYA R + A + F Y Y+++P
Sbjct: 250 LGSRAISHP-LHQGRLEKVWDMEDLVAEGVATQSCPYYATRELVFFAHVNFATYQYLLDP 308
Query: 273 VIRG--AMEVDIKG-AILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQVCS 324
+IR ME +K +I+I DEAHN+ + +DA S++ D L + E+E + +
Sbjct: 309 LIRHECKMEAALKNHSIIIFDEAHNVPSVCQDALSLETTLDNLRLVLSEIEPLIT 363
Score = 108 bits (269), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 140/320 (43%), Gaps = 62/320 (19%)
Query: 450 PGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFG--TCLEAP 507
P + T+ + CL+ ++ F + + ++L SGTL+P + +LG+ E
Sbjct: 545 PPPSLLRTVGIRCLDGSLAFHHLLAATHRVVLASGTLAPFHQIGQDLGISLSDMATYEGL 604
Query: 508 HVIDVDLQVLTSVISTGPDNYPLNASYKTADGYKLMEKLCNRWRETGQWSRLNAKKPLFV 567
H+ V Q SV++ D L+ +Y +++L + E + RL
Sbjct: 605 HIAGVH-QYRISVLTHMMDGARLHCNYGNFRDASFIDRLVSVIFEIVKKVRL-------- 655
Query: 568 EPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENA-------- 619
GG + L +Y GS+ + R+ E +L ++A
Sbjct: 656 ---GGVL----VFLPNYVVMRMVGSRLS----SRICDETGRELRVFIEPKDAMAFSSILD 704
Query: 620 ------NKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKKYNDTY 658
+ A FL+VCR K I VGIP +N V +++Y
Sbjct: 705 TFRVVTRRSTAVFLSVCRAKVGEGIDFADNMARLVICVGIPLRPLNSWVVEAQRRY---- 760
Query: 659 RSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRK 718
SG EWY A RA+NQA+GRCIR+R DYGA++LLD+RF+ + +SKW
Sbjct: 761 -------SGEEWYLIDAIRAVNQALGRCIRNRRDYGAMLLLDDRFERGDFQKRLSKWCAG 813
Query: 719 SIKQYDSFDASLEGLKSFFR 738
S+K + + + L+ L +F+R
Sbjct: 814 SLKVHHTPASVLKELSTFYR 833
>gi|21961619|gb|AAH34517.1| Ercc2 protein [Mus musculus]
Length = 739
Score = 108 bits (270), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 181/802 (22%), Positives = 301/802 (37%), Gaps = 184/802 (22%)
Query: 20 VGGIQVEFPYQ-PYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
V G+ V FPY Y Q +M + TLD H +LE P+GTGK++SLL +A+
Sbjct: 5 VDGLLVYFPYDYIYPEQFSYMLELKRTLD-----AKGHGVLEMPSGTGKTVSLLALIVAY 59
Query: 79 QQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNV 138
Q+ V + L F + + +P +++ N +
Sbjct: 60 QR--------------------VIEELRKLLSFYEQQEGEKLPFLGLALSSR---KNLCI 96
Query: 139 KKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEECK 198
++TP F + + H T YVR +
Sbjct: 97 HPEVTPLRFGKD------------------------VDGKCHSLTASYVRAQYQ------ 126
Query: 199 LLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADD 258
D +L +F + G G + + D++ L G C Y+ AR
Sbjct: 127 ---QDASLPHCRFYEEFDIHGRQMPLPAGIYNLDDLKAL---GHRQGWCPYFLARYSILH 180
Query: 259 AQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQM 317
A +V Y Y+++P I + ++ + A+++ DEAHNI+++ D+ SV++ L + Q
Sbjct: 181 ANVVVYSYHYLLDPKIADLVSKELARKAVVVFDEAHNIDNVCIDSMSVNLTRRTLDRCQS 240
Query: 318 ELE----QVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRELQ 373
L+ V + Q L + + LV + R+A++A+ H + D+ L+E
Sbjct: 241 NLDTLQKTVLRIKETDEQRLRDEYRRLVEGL--REASVARETDAHLANPVLPDEVLQEAV 298
Query: 374 EANI-SRQCFPILLECATKAIK-----EATDTESELPHLSGMS----------------- 410
+I + + F L + +K + ES LSG++
Sbjct: 299 PGSIRTAEHFLGFLRRLLEYVKWRLRVQHVVQESPPAFLSGLAQRVCIQRKPLRFCAERL 358
Query: 411 ---VITLE----GLFSSLTYFFSRNGSHVSDYQLALQKYIK-RDSKNPGGNWTHTLSLWC 462
+ TLE FS LT + + VS Y I+ D + P L C
Sbjct: 359 RSLLHTLEIADLADFSPLT-LLANFATLVSTYAKGFTIIIEPFDDRTPTIA-NPVLHFSC 416
Query: 463 LNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELG---VQFGT--------CLEAPHVID 511
++ ++ K V E S+I+TSGTLSP++ + L V T CL P +I
Sbjct: 417 MDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMATFTMTLARVCL-CPMIIG 475
Query: 512 V--DLQVLTSVISTGPD--------NYPLNASYKTADG-------YKLMEKLCNRWRETG 554
D ++S T D N L S DG Y+ ME W E G
Sbjct: 476 RGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFTSYQYMESTVASWYEQG 535
Query: 555 QWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIE 614
+ K LF+E + G++ + L+ Y + G
Sbjct: 536 ILENIQRNKLLFIETQDGAETS--VALEKYQEACENG----------------------- 570
Query: 615 SQENANKKGASFLAVCRGKIVVGIPF-------------PNINDIQVSLKKKYNDTYRSS 661
+GA L+V RGK+ GI F P + LK + Y
Sbjct: 571 -------RGAILLSVARGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLE--YLRD 621
Query: 662 KNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIK 721
+ + N++ A R Q +GR IR + DYG ++ D+RF R + +W+++ +
Sbjct: 622 QFQIRENDFLTFDAMRHAAQCVGRAIRGKTDYGLMVFADKRFARADKRGKLPRWIQEHLT 681
Query: 722 QYD---SFDASLEGLKSFFRDV 740
+ + D ++ K F R +
Sbjct: 682 DSNLNLTVDEGVQVAKYFLRQM 703
>gi|326912321|ref|XP_003202502.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8-like [Meleagris gallopavo]
Length = 896
Score = 108 bits (270), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/332 (27%), Positives = 141/332 (42%), Gaps = 76/332 (22%)
Query: 457 TLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSEL----GVQFGTCLE--APHVI 510
+L LNPAV F V + ++I+ GT+ P+ F +L GV +E HVI
Sbjct: 587 SLKFLLLNPAVHFAKVVKECRAVIIAGGTMQPVADFREQLLSCAGVDPARIMEFSCGHVI 646
Query: 511 DVDLQVLTSVISTGPDNYPLNASYKTADGYKLMEK-------LCN--------------- 548
+ +L V+ +GP N L +Y+T D ++M++ LCN
Sbjct: 647 PPE-NILPIVLCSGPSNQQLEFTYQTRDLPQMMDETGRILCNLCNVVPGGVVCFFPSYDY 705
Query: 549 ------RWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRV 602
W +TG +RL KK +F EPK +Q E VL Y I +C
Sbjct: 706 EKQVYAHWEKTGLLTRLATKKKIFQEPKKANQ--VEQVLVEYAKCIK---RC-------- 752
Query: 603 KREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQ 647
SQ GA L+V GK I+VG+P+PNI +
Sbjct: 753 ------------SQAGGQMTGALLLSVVGGKMSEGINFSDDLGRCVIMVGMPYPNIKSPE 800
Query: 648 VSLKKKYND-TYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEE 706
+ K + D T + + N +A+NQ+IGR IRH+ D+ +I+LLD R+
Sbjct: 801 LQEKMTWLDKTMPRAASQAPSKVLIENLCMKAVNQSIGRAIRHQKDFASILLLDHRYSRP 860
Query: 707 RNRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
+ +W+R+ + +F ++ L+ F R
Sbjct: 861 AILNKLPQWIRERTQVKPAFGSAFAELRKFHR 892
Score = 81.3 bits (199), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 86/178 (48%), Gaps = 34/178 (19%)
Query: 146 IFYASRTHSQISQVISEYKKTAY--RVPMAVLASRKHYCTNKYVRDKENIDEECKLLLGD 203
I+Y SRTHSQ+SQ + E +K+ + + L SR++ C N+ VR + L+ D
Sbjct: 218 IYYCSRTHSQLSQFVHEVQKSPFGKDTRLVSLGSRQNLCVNEEVRRLGALQ-----LIND 272
Query: 204 RNLGCPQF-KNVHKVRGHPSLQ-------KGGCH----------------EVHDIEDLVN 239
R C + KN H+ + ++ + C EV DIE LV
Sbjct: 273 R---CTEMQKNKHEKKSDAEVEGKKRRVSRTVCPFYSYEQMQFLRDEVLVEVKDIEQLVT 329
Query: 240 VGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIED 297
+G+ + C YY +R AQLV PY +++ R A + +K ++I+DEAHN+ D
Sbjct: 330 LGKETKACPYYGSRYAIAAAQLVVLPYQMLLHEATRNAAGIILKDQVVIIDEAHNLID 387
>gi|242774370|ref|XP_002478428.1| TFIIH complex helicase Rad3, putative [Talaromyces stipitatus ATCC
10500]
gi|218722047|gb|EED21465.1| TFIIH complex helicase Rad3, putative [Talaromyces stipitatus ATCC
10500]
Length = 795
Score = 108 bits (270), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 166/769 (21%), Positives = 291/769 (37%), Gaps = 179/769 (23%)
Query: 78 WQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKN 137
WQ C LK L + GG PS + + VA +
Sbjct: 22 WQYMCDLKKAL------------------DAGGHCVLEMPSGTGKTVTLLSLIVAYQQHH 63
Query: 138 VKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAV----------LASRKHYCTNKYV 187
+ + Y SRT S+I + + E K + + L+SRK+ C + V
Sbjct: 64 GDSR---KLIYCSRTMSEIDKALHELKALMKYRALELGHTEDFRGLGLSSRKNLCLHPSV 120
Query: 188 RDKEN---IDEECKLLL----------GDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDI 234
+ +++ +D C+ L G+ C N+ + H ++ G V
Sbjct: 121 KREKSGTVVDARCRSLTASFVAQKKERGEDVETCTYHDNLDLLEPHNLIEPG----VFTF 176
Query: 235 EDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAH 293
DL+ Q C Y+ R M ++ Y Y+++P I + ++ K I++ DEAH
Sbjct: 177 SDLLRYCQEKVTCPYFTVRRMLPYCNVIIYSYHYLLDPKIAERVSRELSKDCIVVFDEAH 236
Query: 294 NIEDIARDAGSVDIDEDVLLK-------LQMELEQVCSVNPMIYQPLIEMTQDLVGWIER 346
NI+++A ++ S+D+ ED L K L+ ++E++ + + ++ + +E
Sbjct: 237 NIDNVAIESLSIDLTEDSLRKASRGAKNLERKIEEMKTSDAE------KLQSEYTKLVEG 290
Query: 347 RKATLAKREFQHFFS-CWTGDKALRELQEANISR--------QCFPILLECATKAIKEAT 397
KAT R+ S L E NI R Q F L K +
Sbjct: 291 LKATEEARDEDLIMSNPVLPQDLLSEAVPGNIRRAEHFIAFLQRFIQYLMTRMKVTHTIS 350
Query: 398 DTE-SELPHLSGMSVI-----------------TLEGL-------FSSLTYFFSRNGSHV 432
+T S L HL + I TLE + + F + ++
Sbjct: 351 ETTPSFLQHLRELVFIEAKPLKFCSERLTSLVRTLELMNIEDYQPLQEVAMFATLVSTYD 410
Query: 433 SDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSF 492
+ L L+ + + P L L CL+ A+ F+ V E SI++TSGTL+P++ F
Sbjct: 411 RGFLLILEPFESEAATVPNP----VLHLACLDAAIAFRPVCERFSSIVVTSGTLTPLDMF 466
Query: 493 SSELGVQFGTCLEAPHVIDVDLQ-VLTSVISTGPDNYPLNASYKT--------------- 536
L F L+ + + + + L +++ G D +++S++T
Sbjct: 467 PKMLN--FTPVLQESYTMTLARRSFLPMIVTRGSDQSQISSSFQTRNDPSNLRNYGTLLL 524
Query: 537 ------ADG-------YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKH 583
DG Y ME + W G + K + VE + + L+
Sbjct: 525 DFAKIVPDGIVVFFPSYLYMESTLHVWSGMGILDMIWNYKLILVETPDAQESS--LALET 582
Query: 584 YYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPN- 642
Y + G +GA ++V RGK+ G+ F +
Sbjct: 583 YRTACCNG------------------------------RGAILMSVARGKVAEGVDFDHQ 612
Query: 643 ----INDIQVSLKKKYNDTYRSSKNLL------SGNEWYCNQAFRALNQAIGRCIRHRFD 692
+ I V + + R+ L N++ A R +Q +GR IR + D
Sbjct: 613 YGRAVICIGVPFQYTESRILRARLEFLRENYGIRENDFLSFDAMRHASQCLGRVIRGKDD 672
Query: 693 YGAIILLDERFQEERNRAHISKWLRKSIKQYD---SFDASLEGLKSFFR 738
YG ++L D+RF +RN+ + KW+ ++I + + S D ++ K+F R
Sbjct: 673 YGIMVLADKRFARKRNQ--LPKWINQTILESEVNLSTDMAVATAKNFLR 719
Score = 48.1 bits (113), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 40/65 (61%), Gaps = 6/65 (9%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+ + I+V FPY + Y Q +MC + LD GHC +LE P+GTGK+++LL +
Sbjct: 3 FKIDEIEVLFPYPKIYPEQWQYMCDLKKALDAG---GHC--VLEMPSGTGKTVTLLSLIV 57
Query: 77 AWQQN 81
A+QQ+
Sbjct: 58 AYQQH 62
>gi|397615008|gb|EJK63154.1| hypothetical protein THAOC_16209, partial [Thalassiosira oceanica]
Length = 932
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 108/228 (47%), Gaps = 49/228 (21%)
Query: 550 WRETGQ----WSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKC---AVVRKKRV 602
WR+ + W RL A K + GGSQ++FE+ + Y +S+ C AV R K
Sbjct: 360 WRQEDERESVWERLVALKSKVIVESGGSQDEFEMRKQEYMDSVKYNGGCVLIAVYRGKMS 419
Query: 603 KREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYNDTYRSSK 662
+ ND N RG I VG+P P+ + + +K YND R +
Sbjct: 420 EGISFNDNNA------------------RGVICVGLPLPSAFALPIKIKMHYNDEQRKLR 461
Query: 663 N---LLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNR------AH-- 711
N LL G EWY QA+RA+ QA+GRCIRH DYGA+ LLD R ++ + AH
Sbjct: 462 NRSDLLPGREWYNQQAYRAIAQALGRCIRHSGDYGAVFLLDSRHCDDGSPNNGVPVAHKN 521
Query: 712 ISKWLRKSIKQYDSFDASLEGLKSFFRDVKGWVGKKMFNGLENSDNDV 759
+ KW+R ++ ++ + K MFN + NS+++V
Sbjct: 522 LPKWMRGAV-------------RNLSMNNKSGRNASMFNYVSNSNSEV 556
>gi|449542207|gb|EMD33187.1| hypothetical protein CERSUDRAFT_108361 [Ceriporiopsis subvermispora
B]
Length = 954
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 145/341 (42%), Gaps = 71/341 (20%)
Query: 463 LNPAVVFKDVAELSLSIILTSGTLSPM----NSFSSELGVQFGTCLEAPHVI---DVDLQ 515
LNPA FK+V + + S+IL GT+SPM N S + + + H+I ++
Sbjct: 615 LNPATHFKEVIDAARSVILAGGTMSPMSDVVNQLFSNVPRERLSTFSCGHIIPSSNLKAL 674
Query: 516 VLTSVISTGPDNYP-----------------LNASYKTADG-------YKLMEKLCNRWR 551
VL G ++ LN + G Y + + + W
Sbjct: 675 VLKKGSCGGDMHFKFERRSDQALIAEVGQTLLNFANIVPGGMVVFLPSYSFLHSVKSSWE 734
Query: 552 ETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVV-----RKKRVKREG 606
+G +L+AKK LF+EP+ +Q E VL+ Y I Q + A R + +G
Sbjct: 735 ASGIMGKLSAKKKLFMEPQESTQ--VEAVLRDYAAEIQQTVRSAEAWYMNWHDSRSRPQG 792
Query: 607 NNDLNTIESQENANKKGASFLAV---------------CRGKIVVGIPFPNINDIQVSLK 651
+T Q A K GA AV R I++G+PF N+ + L+
Sbjct: 793 TG--STESGQIKATKGGALLFAVIGAKLSEGLNFTDDLARAVIIIGLPFANLASPE--LR 848
Query: 652 KKYNDTYRSSKNLLSGN--------------EWYCNQAFRALNQAIGRCIRHRFDYGAII 697
++ N R ++ + E Y N A+NQ+IGR IRHR D+ ++I
Sbjct: 849 ERMNYVNRVAERRTADGKATPKIPGAKDAAMELYENMCMNAVNQSIGRAIRHRRDWASLI 908
Query: 698 LLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
LLD R+ R R + KW+ +S +SF ++ L +F+R
Sbjct: 909 LLDSRYASPRIRGKLPKWIEESTSVTESFGEAMRELGAFYR 949
Score = 60.1 bits (144), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 61/126 (48%), Gaps = 7/126 (5%)
Query: 175 LASRKHYCTNKYVRDKEN--IDEECKLLL---GDRNLGCPQFKNVHKVRGHPSLQKGGCH 229
L +RK C N +R + +DE C+ LL GDR CP + L+
Sbjct: 307 LGARKQLCINDRLRARAGGELDEACRSLLSEKGDRR--CPHLPPMDDETRMLDLRDQILA 364
Query: 230 EVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILIL 289
DIEDLV GQ C Y+ R AQLV PY+ ++ R A+ +D+ ++I+
Sbjct: 365 APKDIEDLVLTGQASETCPYFGTRRAIPQAQLVLLPYNLLLQKTAREALGIDLTNQVVIV 424
Query: 290 DEAHNI 295
DEAHN+
Sbjct: 425 DEAHNL 430
Score = 50.8 bits (120), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 34/52 (65%), Gaps = 5/52 (9%)
Query: 27 FPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
FP+ PY QL M + S+++ + A++ESPTGTGK+LSLLC +L W
Sbjct: 15 FPFVPYDIQLSLMKHLYSSIEDRK-----VAIVESPTGTGKTLSLLCGSLTW 61
>gi|303390346|ref|XP_003073404.1| Rad3-like ATP dependent DNA binding helicase [Encephalitozoon
intestinalis ATCC 50506]
gi|303302550|gb|ADM12044.1| Rad3-like ATP dependent DNA binding helicase [Encephalitozoon
intestinalis ATCC 50506]
Length = 619
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 121/270 (44%), Gaps = 58/270 (21%)
Query: 30 QPYGSQLVFMCRVISTLDRAQR--DGHCHALLESPTGTGKSLSLLCSTLAWQQNCKLKNQ 87
+ Y SQ +F ++ A+R DG + SPTGTGK++SLL + +
Sbjct: 5 ELYESQKLF-------IEDARRVIDGGSVGIFSSPTGTGKTISLLSAVADYM-------- 49
Query: 88 LANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKKMTPTIF 147
+I ++ D + M K + + +F
Sbjct: 50 --DIEETEMD-------------------------------CRNRMLEKILFQGSRKAVF 76
Query: 148 YASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEECKLLLGDRNLG 207
Y +RTH+Q++Q I+E KK R VL SRK YC N+ +R ++ DE N
Sbjct: 77 YCTRTHTQLAQAINELKKLGVRCNSVVLGSRKIYCLNEEIRKYKSSDE--------MNEA 128
Query: 208 CPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYS 267
C + K H ++ + V D+EDL+ G R C YY ARS + +VF PY
Sbjct: 129 CKEAVKEGKCMLHDGCEEFDGYGVIDVEDLLATGGRERFCPYYTARSYSQQCDIVFLPYQ 188
Query: 268 YIINPVIRGAMEVDIKGAILILDEAHNIED 297
+ R + ++D+KG+I+++DEAHNI D
Sbjct: 189 LLFTREGRKSADIDVKGSIVVVDEAHNIYD 218
Score = 60.8 bits (146), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 117/274 (42%), Gaps = 51/274 (18%)
Query: 463 LNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVIS 522
L+ ++ F+DV E S++L GT+ P++ S L + V L VI
Sbjct: 359 LDASMYFEDVLECR-SLLLAGGTMEPIDQLVSALRKRSPKYFSYGSVCK---DFLPIVIR 414
Query: 523 TGPDNYPLNASYKT-------ADGYKLMEKLCNRWRETGQWSRLNAKKPLFV------EP 569
+GP + +Y+T D + L N R G L +K L + +
Sbjct: 415 SGPSGKEIVVNYETRESPMSIKDVASSILNLSNAVRSGGMVCFLPSKAYLKILKEACGDT 474
Query: 570 KGGSQEDFE--IVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASF- 626
G + +E + + Y + + S C + + +G +F
Sbjct: 475 IGSKKALYEDSVTFEEYVQEVRR-SPCIL----------------FAVMGGSLSEGVNFN 517
Query: 627 LAVCRGKIVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRC 686
++CR +VVG+P+P+ D+++ + K+N G+ + A + +NQA+GR
Sbjct: 518 DSLCRLLVVVGVPYPS-QDLELKERAKFN-----------GSGYTTAIAMKTVNQALGRA 565
Query: 687 IRHRFDYGAIILLDERFQEERNRAHISKWLRKSI 720
+RHR DY ++LLD+R+ + S W+R+ I
Sbjct: 566 LRHRDDYAVLVLLDKRYVQLSRLT--SPWIREKI 597
>gi|402592700|gb|EJW86627.1| excision repair cross-complementing rodent repair deficiency
[Wuchereria bancrofti]
Length = 772
Score = 108 bits (269), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 174/803 (21%), Positives = 306/803 (38%), Gaps = 209/803 (26%)
Query: 20 VGGIQVEFPYQ-PYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
V G++V FPY Y Q+++M + TLD GHC LLE P+GTGK++SLL +A+
Sbjct: 16 VDGLEVYFPYDYIYPEQILYMSELKKTLDA---KGHC--LLEMPSGTGKTVSLLSLVIAY 70
Query: 79 QQNC-KLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKN 137
++L S + P+ E + L N F Q PPS VA+
Sbjct: 71 MLRFPDHLDKLVYCSRTIPEIEKCVEELRNL--FKYYEQCDGKPPSLFA----VAL---- 120
Query: 138 VKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENI--DE 195
++R + I++ +S ++ + ++ T +VR K + D
Sbjct: 121 -----------SARKNLCINESVSSLRQGS------LVDGACQKLTASFVRAKRRLRPDL 163
Query: 196 ECKLLLGDRNLGCPQFKNV--HKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAAR 253
C C F+ + K +P V+++++L +GQ C Y+ +R
Sbjct: 164 PC----------CAFFEKLDEQKDFNYPD-------GVYNLQNLRKLGQQRGICPYFLSR 206
Query: 254 SMADDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVL 312
++ D A +V Y YI++P I + + + + ++ DEAHNI+++ ++ SV + + +
Sbjct: 207 NVVDRAHIVVYSYHYILDPKIAELVSKNFSRHSCVVFDEAHNIDNVCIESMSVSLTKTTV 266
Query: 313 LKLQMEL----EQVCSVNP-------MIYQPLI--------EMTQD-------LVGWIER 346
K +L E V + + Y L+ E T D L I +
Sbjct: 267 EKATQKLGILEEHVQRLREENSEQLRVEYDRLVEGLRRIEEERTNDQILANPVLPDMILK 326
Query: 347 RKATLAKREFQHFFSCWTGDKALRELQEANISR-QCFPILLECATKAIKEATDTESELPH 405
R HF S LR E R + +L+E +++ D L H
Sbjct: 327 EAVPGTIRNALHFIS------FLRRFNEYLKHRMRTKTVLIESPAAFLRDVND----LMH 376
Query: 406 LSGMSVITLEGLFSSLT--------------YFFSRNGSHVSDYQLALQKYIKRDSKNPG 451
+ + F+SLT + + VS Y I+ + G
Sbjct: 377 IDRRPLRFCAERFASLTRTLELADISDFSSLVLITNFATLVSTYARGFTVVIEPLDEKSG 436
Query: 452 GNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVID 511
+ TL L C++ +V + + + ++++TSGTLSP++ + P ++D
Sbjct: 437 TGHSCTLHLSCMDASVAIRPIFQRYHTVVITSGTLSPLDMY--------------PKILD 482
Query: 512 VDLQVLTS-------------VISTGPDNYPLNASYKT---------------------A 537
D ++ S ++S G D + + +++
Sbjct: 483 FDPAIMASLSMTLARPCIAPLIVSKGNDQVAMTSRFESREDAAVIRNYGSLVLELASLVP 542
Query: 538 DG-------YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQ 590
DG Y ME + + W + G L K LF+E + I L+ Y +
Sbjct: 543 DGVVVFFTSYLYMENVISTWYDQGIIDELLKYKLLFIETTDALETS--IALEKYVEACDC 600
Query: 591 GSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFP-NINDIQVS 649
G +GA F +V RGK+ GI F ++ +
Sbjct: 601 G------------------------------RGAIFFSVARGKVSEGIDFSHHLGRAVIM 630
Query: 650 LKKKYNDTYRSSKNL------------LSGNEWYCNQAFRALNQAIGRCIRHRFDYGAII 697
L Y Y S+ L + N++ A R Q +GR +R + DYG ++
Sbjct: 631 LGVPY--VYTESRILRARLEYLREQLGIRENDFLTFDAMRQAAQCMGRALRGKSDYGLMV 688
Query: 698 LLDERFQEERNRAHISKWLRKSI 720
D+RF + + +W+++ I
Sbjct: 689 FADKRFSRKDKMGKLPRWIQEYI 711
>gi|342878343|gb|EGU79689.1| hypothetical protein FOXB_09802 [Fusarium oxysporum Fo5176]
Length = 864
Score = 108 bits (269), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 144/354 (40%), Gaps = 100/354 (28%)
Query: 458 LSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFG----TCLEAPHVIDVD 513
LS L+P F +A + +++L GT+SP + + L T L HVI +
Sbjct: 535 LSYLLLSPTYAFSSIASSARAVVLAGGTMSPFDDYKDHLFPSLEPEKITTLSCGHVIPPE 594
Query: 514 LQVLTSVISTGPDNYPLNASYK---------------------TADG-------YKLMEK 545
+ ++ S+ P P S++ DG Y +++
Sbjct: 595 NLCVWTLASSRPGAPPFEFSFQKRGDTEMITQLGLAILNLCSLVPDGVVIFFPSYGYLDE 654
Query: 546 LCNRWRETG-----QWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKK 600
+ W+++ W RL ++K LF E +G S ++ VL+ Y ++I
Sbjct: 655 VVTVWQKSQGNAQPTWDRLASRKALFKESRGASSDE---VLQEYSDAILG---------- 701
Query: 601 RVKREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNIND 645
E +N KGA L+V GK IV+G+P+PNI
Sbjct: 702 ----------------EKSNGKGALLLSVVGGKMSEGINFSDRLGRCVIVIGLPYPNIAS 745
Query: 646 IQVSLKKKYNDTYRS--------------SKNLLSGNEWYCNQAFRALNQAIGRCIRHRF 691
K +Y +T SK + ++Y N RA+NQ+IGR IRHR
Sbjct: 746 PDWKAKIEYIETTTQNNLTAQGVAKEEAISKGKQTARDFYENACMRAVNQSIGRAIRHRG 805
Query: 692 DYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGL----KSFFRDVK 741
DY AI+L+D R+ ER R + W+R + + DS + L GL FFR K
Sbjct: 806 DYAAIVLVDRRYGTERIRGKLPGWIRGGLVK-DSHEKGLGGLMGAVGGFFRGKK 858
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 89/183 (48%), Gaps = 21/183 (11%)
Query: 146 IFYASRTHSQISQVISEYKKTAY-----------------RVPMAVLASRKHYCTNKYVR 188
I+Y SRTHSQ+SQ I+E ++ ++ V + L+SR+ C N V
Sbjct: 206 IYYTSRTHSQLSQFITELRRPSFPPSLPTSLAKSEETKTEAVKLLPLSSRQRLCINPTVS 265
Query: 189 ---DKENIDEECKLLLGDRN-LGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVV 244
+ I++ C L ++ CP + + + DIEDL +G+ +
Sbjct: 266 RLGSVQAINDRCSELQQPKSGQKCPFVPKEDLLSQTHQFRDSALATLPDIEDLHQLGKSL 325
Query: 245 RGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGS 304
C YYA+R+ A+++ PY ++ R A+ V ++G+++I+DEAHNI D + +
Sbjct: 326 SVCPYYASRTALPGAEIITLPYPLLLQKSARDALGVKLEGSVVIIDEAHNIMDAVANVHA 385
Query: 305 VDI 307
+I
Sbjct: 386 AEI 388
Score = 54.3 bits (129), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Query: 28 PYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCKLKNQ 87
PY PY Q FM V L+ +G +LESPTGTGKSLSL+C++L W +N K
Sbjct: 21 PYTPYDVQEQFMKAVYDVLETG--NGQV-GILESPTGTGKSLSLICASLTWLRNHKSNQF 77
Query: 88 LANISHS 94
A+I S
Sbjct: 78 EASIQES 84
>gi|302889483|ref|XP_003043627.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256724544|gb|EEU37914.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 863
Score = 108 bits (269), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 95/359 (26%), Positives = 146/359 (40%), Gaps = 101/359 (28%)
Query: 451 GGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFG----TCLEA 506
GG LS L+P F +A + +++L GT+SP + + L T L
Sbjct: 529 GGAPDIQLSYLLLSPTHAFSSIASSARAVVLAGGTMSPFDDYKDHLFPSLEPEKVTTLSC 588
Query: 507 PHVIDVDLQVLTSVISTGPDNYPLNASYK---------------------TADG------ 539
HVI + + ++ S+ P P S++ DG
Sbjct: 589 GHVIPPENLCVWTLASSRPGMPPFEFSFQKRSDPEMITQLGLAILNLCSLVPDGVVIFFP 648
Query: 540 -YKLMEKLCNRWRETGQ------WSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGS 592
Y ++++ W+++ W RL +K LF E KG S ++ +L+ Y N+I QG
Sbjct: 649 SYGYLDEVVAAWQKSHGANAQPIWERLATRKALFKESKGASSDE---ILQEYTNAI-QG- 703
Query: 593 KCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVG 637
E +N KGA L+V GK IV+G
Sbjct: 704 ------------------------EGSNGKGALLLSVVGGKMSEGINFSDRLGRCVIVIG 739
Query: 638 IPFPNINDIQVSLKKKYNDTYR--------------SSKNLLSGNEWYCNQAFRALNQAI 683
+P+PNI K +Y +T +S+ + ++Y N RA+NQ+I
Sbjct: 740 LPYPNIASPDWKAKIEYIETTTQTNLITQGIPKEEATSRGKQAARDFYENACMRAVNQSI 799
Query: 684 GRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGL----KSFFR 738
GR IRHR DY AI+L+D R+ +R R + W+R + DS + L GL FFR
Sbjct: 800 GRAIRHRGDYAAIVLVDRRYGTDRIRGKLPGWIRGGLVG-DSHEKGLGGLMGAVGGFFR 857
Score = 81.6 bits (200), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 89/183 (48%), Gaps = 21/183 (11%)
Query: 146 IFYASRTHSQISQVISEYKKTAY-----------------RVPMAVLASRKHYCTNKYVR 188
I+Y SRTHSQ+SQ I+E ++ + V + L+SR+ C N V
Sbjct: 207 IYYTSRTHSQLSQFITELRRPTFPPSLPTSLAKDEESKTEAVKLVPLSSRQRLCINPQVS 266
Query: 189 ---DKENIDEECKLLLGDRN-LGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVV 244
+ I++ C L ++ CP + + + DIEDL ++G+ +
Sbjct: 267 RLGSVQAINDRCAELQKPKSGKKCPFVPKEDLLSETHQFRDSALATLPDIEDLHHLGKSL 326
Query: 245 RGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGS 304
C YYA+R+ A+++ PY ++ R A+ V ++G+++I+DEAHNI D + +
Sbjct: 327 SVCPYYASRTALPGAEIITLPYPLLLQKSARDALGVKLEGSVVIIDEAHNIMDAVANVHA 386
Query: 305 VDI 307
+I
Sbjct: 387 AEI 389
Score = 53.9 bits (128), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 36/56 (64%), Gaps = 3/56 (5%)
Query: 28 PYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCK 83
PY PY Q FM V + L+ +G +LESPTGTGKSLSL+C++L W +N K
Sbjct: 21 PYTPYDVQEQFMKTVYNVLETG--NGQV-GILESPTGTGKSLSLICASLTWLRNHK 73
>gi|345562800|gb|EGX45813.1| hypothetical protein AOL_s00117g18 [Arthrobotrys oligospora ATCC
24927]
Length = 749
Score = 107 bits (267), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 157/704 (22%), Positives = 279/704 (39%), Gaps = 164/704 (23%)
Query: 146 IFYASRTHSQISQVISEYKK-TAYRVPMAV---------LASRKHYCTNKYV-RDKEN-- 192
+ Y SRT S+I + + E K YR L SRK+ C + V R+K+
Sbjct: 28 LIYCSRTMSEIEKALYELKALMEYRAKELGQVEDFRGLGLTSRKNLCLHPSVKREKKGTV 87
Query: 193 IDEECKLLLG----------DRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQ 242
+D C+ L + C N+ + H + G V+ ++ ++ G+
Sbjct: 88 VDARCRSLTAGFVKEKKEKGEEVESCIYHDNLDLLEPHNLIPPG----VYTLDGMLKYGE 143
Query: 243 VVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARD 301
+ C Y+ AR M ++ Y Y+++P I + ++ K I++ DEAHNI+++ +
Sbjct: 144 DQKQCPYFTARRMMPYCNVIIYSYHYLLDPKIAERVSKELSKDCIVVFDEAHNIDNVCIE 203
Query: 302 AGSVDIDEDVLLK-------LQMELEQVCSVNP----MIYQPLIEMTQDLVGWIERRKAT 350
+ S+DI ED L K L+ ++E + S + Y L+E QD A+
Sbjct: 204 SLSIDITEDSLRKAARGCTSLEKKIEDMKSTDADKLQQEYAKLVEGLQD---------AS 254
Query: 351 LAKREFQHFFSCWTGDKALRELQEANISR--------QCFPILLECATKAIKEATDT-ES 401
A+ E + D L+E NI R + F L+ K + ++T S
Sbjct: 255 TAREEDSFMANPVLPDDLLKEAVPGNIRRAEHFVAFLKRFVEYLKTRMKVLHVISETPPS 314
Query: 402 ELPHLSGMSVI-----------------TLE-------GLFSSLTYFFSRNGSHVSDYQL 437
L HL ++ I TLE + F + ++ + L
Sbjct: 315 FLQHLKDLTFIEKKPLRFCAERLTSLIRTLELSNVEEFQALQEVATFATLVATYEKGFLL 374
Query: 438 ALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELG 497
L+ + + P + T CL+ ++ K V + S+++TSGT+SP+ + L
Sbjct: 375 ILEPFESETATVPNPIFHFT----CLDASIAIKPVFDRFWSVVITSGTISPLEMYPKML- 429
Query: 498 VQFGTCLEAPHVIDVDLQ-VLTSVISTGPDNYPLNASYK--------------------- 535
QF ++ + + + + L V++ G D +++ ++
Sbjct: 430 -QFDCVVQESYAMTLARRSFLPMVVTRGSDQVAISSRFEIRNDPSVVRNYGNLMIEFSKI 488
Query: 536 TADG-------YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSI 588
T DG Y ME + + W+ G + K + VE SQE + L+ Y +
Sbjct: 489 TPDGLVIFFPSYLYMESIISMWQGMGILDEVWKYKLILVETP-DSQET-SLALETYRTAC 546
Query: 589 SQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPN---IND 645
G +GA L V RGK+ GI F +
Sbjct: 547 CNG------------------------------RGAVLLCVARGKVSEGIDFDHQYGRTV 576
Query: 646 IQVSLKKKYNDTYRSSKNL--------LSGNEWYCNQAFRALNQAIGRCIRHRFDYGAII 697
I + + +Y ++ L + N++ A R Q +GR +R + DYG ++
Sbjct: 577 ICIGVPFQYTESRILKARLEFLRENFRIKENDFLSFDAMRHAAQCLGRVLRGKDDYGIMV 636
Query: 698 LLDERFQEERNRAHISKWLRKSIKQYD---SFDASLEGLKSFFR 738
L D+RF ++RN+ + KW+ +++ + S D S+ K F R
Sbjct: 637 LADKRFGKKRNQ--LPKWIAQALLDSEMNLSVDMSVAAAKKFLR 678
>gi|296211273|ref|XP_002752340.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8-like [Callithrix jacchus]
Length = 903
Score = 107 bits (267), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 147/319 (46%), Gaps = 47/319 (14%)
Query: 457 TLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSEL----GVQFGTCLE--APHVI 510
+L LNPAV F V + ++++ GT+ P++ F +L GV+ +E HVI
Sbjct: 591 SLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPVSDFRQQLLACAGVEPERVVEFSCGHVI 650
Query: 511 DVDLQVLTSVISTGPDNYPLNASYKTADGYKLMEK----LCN------------------ 548
D +L VI +G + PL +++ + ++M++ LCN
Sbjct: 651 PPD-NILPLVICSGISSQPLEFTFQKRELPQMMDEAGGILCNLCGVVPGGVVCFFPSYEY 709
Query: 549 ------RWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRV 602
W + G RL A+K +F EPK S E VL Y I QG C ++R
Sbjct: 710 LRQVHTHWEKGGLLDRLAARKKIFQEPK--STHQVEQVLLAYSRCI-QG--CG---QERG 761
Query: 603 KREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYNDTY--RS 660
+ G L+ + + + + L C ++VG+PFPNI ++ K Y D R+
Sbjct: 762 RVTGALLLSVVGGKMSEGINFSDNLGRC--VVMVGMPFPNIRSPELQEKMAYLDQTLPRA 819
Query: 661 SKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSI 720
G N +A+NQ+IGR IRH+ D+ +I+LLD+R+ A + W++ +
Sbjct: 820 PGQAPPGKALVENLCMKAVNQSIGRAIRHQRDFASIVLLDQRYARPPVLAKLPAWIQARV 879
Query: 721 KQYDSFDASLEGLKSFFRD 739
+ +F ++ ++ F R+
Sbjct: 880 EVKAAFGPAIAAVQKFHRE 898
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 87/182 (47%), Gaps = 20/182 (10%)
Query: 146 IFYASRTHSQISQVISEYKKTAY--RVPMAVLASRKHYCTNKYVRD---KENIDEECKLL 200
++Y SRTHSQ++Q + E KK+ + V + L SR++ C N+ V+ + I++ C +
Sbjct: 229 VYYCSRTHSQLAQFVHEVKKSPFGKDVRLVSLGSRQNLCVNEDVKSLGSVQLINDRCVDM 288
Query: 201 LGDRNLGCPQFKNVHKVRGHPSLQKG---------------GCHEVHDIEDLVNVGQVVR 245
R+ + R P Q EV DIE L+ +G+ R
Sbjct: 289 QRSRHEKKKGAEEEKPKRRRPEKQAACPFYNHEQMGLLRDEALAEVKDIEQLLALGKEAR 348
Query: 246 GCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSV 305
C YY +R AQLV PY +++ R A + ++ ++I+DEAHN+ D SV
Sbjct: 349 ACPYYGSRLAIPAAQLVVLPYQMLLHAATRQAAGIRLQDQVVIIDEAHNLIDTITGMHSV 408
Query: 306 DI 307
++
Sbjct: 409 EV 410
Score = 57.4 bits (137), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 40/67 (59%), Gaps = 5/67 (7%)
Query: 21 GGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQ 80
GGI FP+ PY Q FM + LD A + G + ESPTGTGKSLSL+C L+W +
Sbjct: 9 GGIHFPFPFTPYSIQKDFMAELYRVLD-AGKIG----IFESPTGTGKSLSLICGALSWLR 63
Query: 81 NCKLKNQ 87
+ + K +
Sbjct: 64 DFEQKKR 70
>gi|367035588|ref|XP_003667076.1| hypothetical protein MYCTH_104059 [Myceliophthora thermophila ATCC
42464]
gi|347014349|gb|AEO61831.1| hypothetical protein MYCTH_104059 [Myceliophthora thermophila ATCC
42464]
Length = 799
Score = 107 bits (267), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 163/733 (22%), Positives = 293/733 (39%), Gaps = 134/733 (18%)
Query: 146 IFYASRTHSQISQVISEYK--------KTAYRVPMAVLA--SRKHYCTNKYVRDKEN--- 192
+ Y SRT S+I + + E K + Y L SRK+ C + V+ +++
Sbjct: 67 LIYCSRTMSEIEKALVELKALMKFRAERLGYEEEFRGLGLTSRKNLCLHPSVKREKSGNV 126
Query: 193 IDEECKLLL----------GDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQ 242
+D C+ L G+ C N+ + H + G V + ++ G+
Sbjct: 127 VDARCRSLTAGFIKEKKEKGEDVEVCVYHDNLDLLEPHNLIPNG----VWTFDGILRYGE 182
Query: 243 VVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARD 301
+ C Y+ AR M ++ Y Y+++P I + ++ K I++ DEAHNI+++ +
Sbjct: 183 QHKQCPYFTARRMMQYCNVIIYSYHYLLDPKIAERVSRELSKDCIVVFDEAHNIDNVCIE 242
Query: 302 AGSVDIDEDVLLKLQMELEQV-CSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFF 360
A S DI +D L K + + +N M ++ + +E K R+ F
Sbjct: 243 ALSTDITDDSLRKATRGAQNLENKINEMRESDQQKLQDEYEKLVEGLKGADDGRQEDSFM 302
Query: 361 SCWT-GDKALRELQEANISR--------QCFPILLECATKAIKEATDTE-SELPHLSGMS 410
+ T D L+E NI R + F L+ K + ++T S L HL +
Sbjct: 303 ANPTLPDDLLKEAVPGNIRRAEHFVAFLRRFIEYLKTRMKVRQVISETPPSFLAHLKEHT 362
Query: 411 VITLEGL------FSSLTYFFSRNGSHVSDYQ--------------------LALQKYIK 444
I + L +SL + +++ DYQ L L+ +
Sbjct: 363 FIEKKPLRFCAERLTSLVR--TLELTNIEDYQPLQEVATFATLVATYEKGFLLILEPFES 420
Query: 445 RDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCL 504
++ P L CL+ A+ K V + S+++TSGTLSP+ + L F T +
Sbjct: 421 DTAEVPNP----VLHFTCLDAAIAIKPVFDRFSSVVITSGTLSPLEMYPKMLN--FPTVV 474
Query: 505 EAPHVIDVDLQ-VLTSVISTGPDNYPLNASYK---------------------TADG--- 539
+ + + + + L +++ G D ++ S++ T DG
Sbjct: 475 QESYSMTLARRSFLPMIVTRGSDQASISTSFQVRNEPSVVRNYGNLLTEFAKITPDGMVV 534
Query: 540 ----YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCA 595
Y ME + + W+ G + K + VE + + L+ Y + G
Sbjct: 535 FFPSYLYMESIISMWQGMGILDEVWKYKLILVETPDAQETS--LALETYRTACCNGRGAV 592
Query: 596 VVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKY- 654
++ R K D + ++ G + L +G+PF + + ++
Sbjct: 593 LLCVARGKVSEGIDFD--------HQYGRTVLC-------IGVPFQYTESRILKARLEFL 637
Query: 655 NDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISK 714
+TYR + N++ A R Q +GR +R + DYG ++L D RFQ R RA + K
Sbjct: 638 RETYR-----IRENDFLSFDAMRHAAQCLGRVLRGKDDYGLMVLADRRFQ--RKRAQLPK 690
Query: 715 WLRKSIKQYD---SFDASLEGLKSFFRDVKGWVGKKMFNGLE--NSDNDVDHVSSMDQ-- 767
W+ +++ D S D ++ + F R + K G+ + D+ H MD+
Sbjct: 691 WISQALLDADVNLSTDMAVSSARRFLRTMAQPFRAKDQEGISTWSIDDLRRHQEKMDEER 750
Query: 768 CKEVTKQNTQELN 780
KE+ Q +ELN
Sbjct: 751 IKELQAQRERELN 763
>gi|358380117|gb|EHK17796.1| hypothetical protein TRIVIDRAFT_214193 [Trichoderma virens Gv29-8]
Length = 763
Score = 107 bits (267), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 158/726 (21%), Positives = 288/726 (39%), Gaps = 133/726 (18%)
Query: 107 NGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKKMTPTIFYASRTHSQISQVISEYKK- 165
+ GG PS + + + VA +K+ + Y SRT S+I + + E +
Sbjct: 5 DAGGHCVLEMPSGTGKTVSLLSLIVAYQQHMPEKR---KLIYCSRTMSEIEKALVELQSL 61
Query: 166 TAYRVPMAV---------LASRKHYCTNKYVRDKEN---IDEECKLLLG-------DRNL 206
YR L SRK+ C + V+ +++ +D C+ L DR
Sbjct: 62 MKYRAEQLGYEEEFRGLGLTSRKNLCLHPSVKREKSGSIVDARCRSLTAGFVKEKKDRGE 121
Query: 207 G---CPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVF 263
C N+ + H + G V + L+ G+ + C Y+ AR M + +V
Sbjct: 122 NVDVCTYHDNLDLLEPHNLIPNG----VWSFDALLKYGEEHKQCPYFTARRMMEYCNVVI 177
Query: 264 CPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLKL----QME 318
Y Y+++P I + D K I++ DEAHNI+++ ++ S DI ED + K Q
Sbjct: 178 FSYHYLLDPKIAERVSKDFSKDCIVVFDEAHNIDNVCIESLSTDITEDSIRKATRSAQHL 237
Query: 319 LEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRELQEANIS 378
++ + + L + LV + R+A +++E + D L+E NI
Sbjct: 238 ERRIAEMRETDQEQLQNEYEKLVQGL--READESRQEDAFMANPALPDDLLKEAVPGNIR 295
Query: 379 R--------QCFPILLECATKAIKEATDTE-SELPHLSGMSVI----------------- 412
R + F L+ K + ++T S L HL + I
Sbjct: 296 RAEHFVAFLKRFLEYLKTRMKVRQVISETPPSFLAHLKEHTFIEKKPLRFCAERLTSLVR 355
Query: 413 TLE-------GLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNP 465
TLE + F + ++ + L L+ Y ++ P TL CL+
Sbjct: 356 TLELTNIEDYQALQEVATFATLVATYEKGFLLILEPYESDTAEVPNP----TLHFTCLDA 411
Query: 466 AVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQ-VLTSVISTG 524
A+ + V E S+I+TSGT+SP+ + L F T ++ + + + + L +++ G
Sbjct: 412 AIAIRPVFERFYSVIITSGTISPLEMYPKML--DFSTVIQESYSMTLARRSFLPMIVTRG 469
Query: 525 PDNYPLNASYK---------------------TADG-------YKLMEKLCNRWRETGQW 556
D +++S++ T DG Y ME + + W+ G
Sbjct: 470 SDQASVSSSFQVRNEPSVVRNYGNLLTEFARITPDGMVVFFPSYLYMESIISMWQGMGIL 529
Query: 557 SRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQ 616
+ K + VE ++ + L+ Y + G ++ R K D +
Sbjct: 530 DEVWKYKLILVETPDA--QETSLALETYRTACCNGRGAILLCVARGKVSEGIDFD----- 582
Query: 617 ENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKY-NDTYRSSKNLLSGNEWYCNQA 675
++ G R + +G+PF + + ++ +TYR + N++ A
Sbjct: 583 ---HQYG-------RTVLCIGVPFQYTESRILKARLEFLRETYR-----IKENDFLSFDA 627
Query: 676 FRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYD---SFDASLEG 732
R Q +GR +R + DYG ++L D RFQ + R + KW+ + ++ D S D ++
Sbjct: 628 MRHAAQCLGRVLRGKDDYGVMVLADRRFQ--KKRTQLPKWINQGLQDADTNLSTDMAVSS 685
Query: 733 LKSFFR 738
+ F +
Sbjct: 686 ARRFLK 691
>gi|21322260|gb|AAM45142.1| excision repair cross-complementing rodent repair deficiency,
complementation group 2 (xeroderma pigmentosum D) [Homo
sapiens]
Length = 736
Score = 107 bits (266), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 170/724 (23%), Positives = 282/724 (38%), Gaps = 147/724 (20%)
Query: 122 PSTNGQTAQV---AMNNKNVKKKMTPTIFYASRTHSQISQVISEYKKT--------AYRV 170
PS G+T + M + + Y SRT +I +VI E +K ++
Sbjct: 19 PSGTGKTVSLLALIMAYQRAYPLEVTKLIYCSRTVPEIEKVIEELRKLLNFYEKQEGEKL 78
Query: 171 PMAVLA--SRKHYCTNKYV---RDKENIDEECKLLLG---------DRNLGCPQFKNVHK 216
P LA SRK+ C + V R +++D +C L D +L +F
Sbjct: 79 PFLGLALSSRKNLCIHPEVTPLRFGKDVDGKCHSLTASYVRAQYQHDTSLPHCRFYEEFD 138
Query: 217 VRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRG 276
G G +++++DL +G+ C Y+ AR A +V Y Y+++P I
Sbjct: 139 AHGREVPLPAG---IYNLDDLKALGRRQGWCPYFLARYSILHANVVVYSYHYLLDPKIAD 195
Query: 277 AMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQ----VCSVNPMIYQ 331
+ ++ + A+++ DEAHNI+++ D+ SV++ L + Q LE V + Q
Sbjct: 196 LVSKELARKAVVVFDEAHNIDNVCIDSMSVNLTRRTLDRCQGNLETLQKTVLRIKETDEQ 255
Query: 332 PLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRELQEANI-SRQCFPILLECAT 390
L + + LV + R+A+ A+ H + D+ L+E +I + + F L
Sbjct: 256 RLRDEYRRLVEGL--REASAARETDAHLANPVLPDEVLQEAVPGSIRTAEHFLGFLRRLL 313
Query: 391 KAIK-----EATDTESELPHLSGMS--------------------VITLE----GLFSSL 421
+ +K + ES LSG++ + TLE FS L
Sbjct: 314 EYVKWRLRVQHVVQESPPAFLSGLAQRVCIQRKPLRFCAERLRSLLHTLEITDLADFSPL 373
Query: 422 TYFFSRNGSHVSDYQLALQKYIK-RDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSII 480
T + + VS Y I+ D + P L C++ ++ K V E S+I
Sbjct: 374 T-LLANFATLVSTYAKGFTIIIEPFDDRTPTIA-NPILHFSCMDASLAIKPVFERFQSVI 431
Query: 481 LTSGTLSPMNSFSSELG---VQFGT--------CLEAPHVIDV--DLQVLTSVISTGPD- 526
+TSGTLSP++ + L V T CL P +I D ++S T D
Sbjct: 432 ITSGTLSPLDIYPKILDFHPVTMATFTMTLARVCL-CPMIIGRGNDQVAISSKFETREDI 490
Query: 527 -------NYPLNASYKTADG-------YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGG 572
N L S DG Y+ ME W E G + K LF+E + G
Sbjct: 491 AVIRNYGNLLLEMSAVVPDGIVAFFTSYQYMESTVASWYEQGILENIQRNKLLFIETQDG 550
Query: 573 SQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRG 632
++ + L+ Y + G +GA L+V RG
Sbjct: 551 AETS--VALEKYQEACENG------------------------------RGAILLSVARG 578
Query: 633 KIVVGIPF-------------PNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRAL 679
K+ GI F P + LK + Y + + N++ A R
Sbjct: 579 KVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLE--YLRDQFQIRENDFLTFDAMRHA 636
Query: 680 NQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYD---SFDASLEGLKSF 736
Q +GR IR + DYG ++ D+RF R + +W+++ + + + D ++ K F
Sbjct: 637 AQCVGRAIRGKTDYGLMVFADKRFARGDKRGKLPRWIQEHLTDANLNLTVDEGVQVAKYF 696
Query: 737 FRDV 740
R +
Sbjct: 697 LRQM 700
>gi|297705154|ref|XP_002829448.1| PREDICTED: LOW QUALITY PROTEIN: TFIIH basal transcription factor
complex helicase XPD subunit-like [Pongo abelii]
Length = 724
Score = 107 bits (266), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 165/712 (23%), Positives = 282/712 (39%), Gaps = 123/712 (17%)
Query: 122 PSTNGQTAQV---AMNNKNVKKKMTPTIFYASRTHSQISQVISEYKKTA----------Y 168
PS G+T + M + + Y SRT +I +VI E +K
Sbjct: 7 PSGTGKTVSLLALIMAYQRAYPLEVTKLIYCSRTVPEIEKVIEELRKLLNFYEKQEGEKL 66
Query: 169 RVPMAVLASRKHYCTNKYV---RDKENIDEECKLLLG---------DRNLGCPQFKNVHK 216
+ L+SRK+ C + V R +++D +C L D +L +F
Sbjct: 67 QFLGLALSSRKNLCIHPEVTPLRFGKDVDGKCHSLTASYVRAQYQHDTSLPHCRFYEEFD 126
Query: 217 VRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRG 276
G G +++++DL +G+ C Y+ AR A +V Y Y+++P I
Sbjct: 127 AHGREVPLSAG---IYNLDDLKALGRRQGWCPYFLARYSILHANVVVYSYHYLLDPKIAD 183
Query: 277 AMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQ----VCSVNPMIYQ 331
+ ++ + A+++ DEAHNI+++ D+ SV++ L + Q LE V + Q
Sbjct: 184 LVSKELARKAVVVFDEAHNIDNVCIDSMSVNLTRRTLDRCQGNLETLQKTVLRIKETDEQ 243
Query: 332 PLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRELQEANI-SRQCFPILLECAT 390
L + + LV + R+A++A+ H + D+ L+E +I + + F L
Sbjct: 244 RLRDEYRRLVEGL--REASVARETDAHLANPVLPDEVLQEAVPGSIRTAEHFLGFLRRLL 301
Query: 391 KAIK-----EATDTESELPHLSGMS--------------------VITLE----GLFSSL 421
+ +K + ES LSG++ + TLE FS L
Sbjct: 302 EYVKWRLRVQHVVQESPPAFLSGLAQRVCIQRKPLRFCAERLRSLLYTLEITDLADFSPL 361
Query: 422 TYFFSRNGSHVSDYQLALQKYIK-RDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSII 480
T + + VS Y I+ D + P L C++ ++ K V E S+I
Sbjct: 362 T-LLANFATLVSTYAKGFTIIIEPFDDRTPTIA-NPILHFSCMDASLAIKPVFERFQSVI 419
Query: 481 LTSGTLSPMNSFSSELG---VQFGT--------CLEAPHVIDV--DLQVLTSVISTGPD- 526
+TSGTLSP++ + L V T CL P +I D ++S T D
Sbjct: 420 ITSGTLSPLDIYPKILDFHPVTMATFTMTLARVCL-CPMIIGRGNDQVAISSKFETREDI 478
Query: 527 -------NYPLNASYKTADG-------YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGG 572
N L S DG Y+ ME W E G + K LF+E + G
Sbjct: 479 AVIRNYGNLLLEMSAVVPDGIVAFFTSYQYMESTVASWYEQGILENIQRNKLLFIETQDG 538
Query: 573 SQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRG 632
++ + L+ Y + G ++ R K D + G R
Sbjct: 539 AETS--VALEKYQEACENGRGAILLSVARGKVSEGIDF--------VHHYG-------RA 581
Query: 633 KIVVGIPFPNINDIQVSLKKKY-NDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRF 691
I+ G+P+ + +KKY D ++ + N++ R Q +GR IR +
Sbjct: 582 VIMFGVPYVYTQSRILKARKKYLRDQFQ-----IRENDFLTLDTMRHAAQXVGRAIRGKT 636
Query: 692 DYGAIILLDERFQEERNRAHISKWLRKSIKQYD---SFDASLEGLKSFFRDV 740
DYG ++ D+RF R + +W+++ + + + D ++ K F R +
Sbjct: 637 DYGLMVFADKRFARGDKRGKLPRWIQEHLTDANLNLTVDEGVQVAKYFLRQM 688
>gi|449015796|dbj|BAM79198.1| similar to BRCA1-binding helicase-like protein BACH1
[Cyanidioschyzon merolae strain 10D]
Length = 1103
Score = 107 bits (266), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 120/262 (45%), Gaps = 70/262 (26%)
Query: 144 PTIFYASRTHSQISQVISEYKKTAYRVPM--AVLASRKHYCTNKYVRD------------ 189
P IF+ SRTH+Q+SQVI+E ++T Y M +LASRKHYC ++ ++
Sbjct: 208 PRIFFCSRTHAQLSQVIAEMRRTPYAGKMRSTLLASRKHYCVHEDIQRAPSTLQAEACQR 267
Query: 190 --KENIDEECKLLLGDRNLGCPQFKNVHKVRGHPS--LQKGGCH--EVHDIEDLVNVGQV 243
+ + EE K + + H S +++ C + +EDLV VG+
Sbjct: 268 AVQLSFMEEAKSAADASSTVADPLAGISPCFYHHSAAVRRTACSAPQPFQMEDLVQVGRH 327
Query: 244 VRGCSYYAAR-------------------------------------------------- 253
GC Y+A+R
Sbjct: 328 WHGCPYFASRFLVHGDIQTEPNQDSVEGSSVPDERSHTGSASSTDGAVSARATSCTTRTR 387
Query: 254 SMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLL 313
++ + A ++F PYSY+++P+IR M++DI GA+LI+DEAHNIE++ +A SVD+ +
Sbjct: 388 TIIEPADIIFSPYSYLVDPLIRRRMDIDITGAVLIIDEAHNIEEVCLEAASVDVSLSQVQ 447
Query: 314 KLQMELEQVCSVNPMIYQPLIE 335
++ ++L+ V +P +E
Sbjct: 448 RVLLQLDHYLGVQMPETEPTLE 469
Score = 103 bits (258), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 83/153 (54%), Gaps = 25/153 (16%)
Query: 620 NKKGASFLAVCRGKI---------------VVGIPFPNINDIQVSLKKKYNDTYR----- 659
+K GA LAVCRGKI +VGIP+PN+ D V LK +YND
Sbjct: 947 HKNGAIMLAVCRGKISEGLNFADQYGRAVIMVGIPYPNLTDTFVQLKMRYNDERSGAVSG 1006
Query: 660 -----SSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISK 714
+S + LSG +WY QA R +NQA+GRCIR+ DY +IILLD R+++ R + +
Sbjct: 1007 APINATSTSRLSGKQWYVLQAHRTVNQALGRCIRNPKDYASIILLDVRYRDTRTVNCMCR 1066
Query: 715 WLRKSIKQYDSFDASLEGLKSFFRDVKGWVGKK 747
W+R ++ Y + L++ R+V + +K
Sbjct: 1067 WIRDPLRDYIARHGQTLTLEAAVREVAEFFFQK 1099
Score = 100 bits (249), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 107/255 (41%), Gaps = 57/255 (22%)
Query: 395 EATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGS------------HVSDYQLALQKY 442
E +TE L G + LE +L + + S H +DY+L L++
Sbjct: 616 ERAETEPRFASLCGEVLHLLERFHIALQFIYGGQSSKGAAAPAEASLLHATDYRLVLRRE 675
Query: 443 IKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGT 502
+++ + G L LWC+NPA+ F+ + + + SI+LTSGTLSPM SF SEL F
Sbjct: 676 MRQGTY---GGVEFKLGLWCMNPAIAFRHLRDNARSIVLTSGTLSPMESFRSELATDFLC 732
Query: 503 CLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTA---------------------DG-- 539
E H+ID + V V+ T L SY+T+ DG
Sbjct: 733 QTECDHIIDPEKHVRVCVVGTSSSGDRLEGSYRTSATWSYQDAIGEALAHCSAQIPDGVL 792
Query: 540 -----YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKC 594
Y+++E + RW TG R+ K LF+E G V+ Y + G
Sbjct: 793 CFMPCYRVLESMLQRWSSTGAIERICGAKRLFIERSSGQ------VITEYATETAGG--- 843
Query: 595 AVVRKKRVKREGNND 609
R++R G D
Sbjct: 844 -----YRLQRRGWRD 853
Score = 71.6 bits (174), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 72/127 (56%), Gaps = 19/127 (14%)
Query: 4 EANPNPNYRKPLNAYH---VGGIQVEFP--YQPYGSQLVFMCRVISTLDRAQRDGHCHAL 58
E + PN + L + + G++V+FP +P+ QL+ M +VI L RAQ +A
Sbjct: 5 ERHEEPNGAQTLKTWRTLEIAGLEVKFPTELEPHKPQLIIMNQVIRCLQRAQ-----NAC 59
Query: 59 LESPTGTGKSLSLLCSTLAWQQNCKLKNQ---LANISHS------KPDTEAVTDPLANGG 109
+ESPTGTGKSL+LLCS LAW + K +++ LA +H+ KP+TE D +
Sbjct: 60 IESPTGTGKSLALLCSALAWLEKEKERSEPSLLAVANHADMHSEFKPETEEPADEKQSIP 119
Query: 110 GFIPESQ 116
+PES+
Sbjct: 120 KLLPESR 126
>gi|403216750|emb|CCK71246.1| hypothetical protein KNAG_0G01890 [Kazachstania naganishii CBS
8797]
Length = 773
Score = 107 bits (266), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 172/778 (22%), Positives = 306/778 (39%), Gaps = 194/778 (24%)
Query: 122 PSTNGQTAQVAMNNKNVKKKMT----PTIFYASRTHSQISQVISEYKKTA-YRVPMAV-- 174
PS G+T V++ + V +M I Y SRT S+I + + E + YR
Sbjct: 43 PSGTGKT--VSLLSLTVAYQMHYPEHRKIIYCSRTMSEIEKALVELENLMDYRAKELGHA 100
Query: 175 -------LASRKHYCTNKYVRDKEN---IDEECKLL---LGDRNLG---------CPQFK 212
L SRK+ C + VR + +DE+C+ L + R L C +
Sbjct: 101 EEFRGLGLTSRKNLCLHPVVRKERKGTVVDEKCRRLTNGVNKRKLEEDPNAEVELCAYHE 160
Query: 213 NVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINP 272
N++ + L G V E L+ + C Y+ R M ++ Y Y+++P
Sbjct: 161 NLYDLDVENYLPNG----VFSFEKLIKYCEEKTLCPYFIVRRMISMCNIIIYSYHYLLDP 216
Query: 273 VI--RGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLK-------LQMELEQVC 323
I R + EV K +I+I DEAHNI+++ ++ S+D+ DVL + L+ ++++V
Sbjct: 217 KIAERVSREVS-KDSIVIFDEAHNIDNVCIESLSLDLTNDVLRRAAKGANSLEEKVQEVR 275
Query: 324 SVNPMI----YQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRELQEANISR 379
SV+ Y L++ +V + ++ T + + + L E NI R
Sbjct: 276 SVDATKLQDEYSKLVQGLH-MVDIVPAQEETFVE-------TPVLSEDLLTEAIPGNIRR 327
Query: 380 QCFPI--------LLECATKAIKEATDT-ESELPHLSGMSVI-----------------T 413
+ L+ K + ++T +S L HL ++ I T
Sbjct: 328 AEHFVSFMKRLIEYLKTRMKVLHVISETPKSFLQHLKHLTFIDRKPLRFCSERLSLLVRT 387
Query: 414 LEGL----FSSL---TYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPA 466
LE F++L F + ++ +QL ++ Y ++ P + CL+ +
Sbjct: 388 LEVTEVEDFTALKDIATFATLISTYEDGFQLIIEPYEIENAAVPNP----IMRFTCLDAS 443
Query: 467 VVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQ-VLTSVISTGP 525
+ K V E S+I+TSGT+SP++ + L F T L+ + + + + L +++ G
Sbjct: 444 IAIKPVFETFSSVIITSGTISPLDMYPKMLN--FETVLQKSYAMTLAKKSFLPMIVTKGS 501
Query: 526 DNYPLNASYK---------------------TADG-------YKLMEKLCNRWRETGQWS 557
D +++ ++ T DG Y ME + + W+ G
Sbjct: 502 DQVAISSRFEIRNDPSIVRNYGSMMVEFAKITPDGMVVFFPSYLYMESIVSMWQTMGILD 561
Query: 558 RLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQE 617
+ K + VE + + L+ Y + S G
Sbjct: 562 EVWKHKLILVETPDAQETS--LALETYRKACSNG-------------------------- 593
Query: 618 NANKKGASFLAVCRGKIVVGIPFPN---INDIQVSLKKKYNDTYRSSKNL--------LS 666
+GA ++V RGK+ GI F + + + + +Y ++ L +
Sbjct: 594 ----RGAILMSVARGKVSEGIDFDHQYGRTVLMIGIPFQYTESRILKARLEFLRENYQIK 649
Query: 667 GNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYD-- 724
N++ A R Q +GR +R + DYG ++L D RF R ++ + KW+ + + D
Sbjct: 650 ENDFLSFDAMRHAAQCLGRVLRGKDDYGVMVLADRRFA--RKKSQLPKWIAQGLSDADMN 707
Query: 725 -SFDASLEGLKSFFR--------------------DVKGWVGKKMF-NGLENSDNDVD 760
S D ++ K F R D+KG+ +K NG D DVD
Sbjct: 708 LSTDMAIANAKQFLRTMAQPTDPKDQEGVSVWNLDDLKGYQEQKQASNGTVIHDGDVD 765
Score = 45.8 bits (107), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 6/91 (6%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+ + + V FPY + Y Q +MC + TLD +++LE P+GTGK++SLL T+
Sbjct: 3 FFIDDLPVLFPYPKIYPEQYHYMCDIKRTLDAGG-----NSILEMPSGTGKTVSLLSLTV 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLAN 107
A+Q + ++ S + + E L N
Sbjct: 58 AYQMHYPEHRKIIYCSRTMSEIEKALVELEN 88
>gi|448537080|ref|XP_003871257.1| Rad3 protein [Candida orthopsilosis Co 90-125]
gi|380355614|emb|CCG25132.1| Rad3 protein [Candida orthopsilosis]
Length = 792
Score = 106 bits (265), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 165/746 (22%), Positives = 290/746 (38%), Gaps = 167/746 (22%)
Query: 146 IFYASRTHSQISQVISE-YKKTAYRVPMAV---------LASRKHYCTNKYV-RDKEN-- 192
I Y SRT S+I + + E +K +R L SRK+ C N + R+K+
Sbjct: 69 IVYCSRTMSEIEKALIELHKLMEFRASELGYVEDFRGLGLTSRKNLCLNPLISREKKGNV 128
Query: 193 IDEECKLLLGDR---NLGCPQFKNVHKVRG---------HPSLQKGGCHE-----VHDIE 235
+DE C+ + + + +VR H L HE V+ +
Sbjct: 129 VDEMCRRVTNGQLKEKIEKGVVTEEDQVRDPAKYSLCSYHEKLYDLDPHELVPSGVYSFD 188
Query: 236 DLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHN 294
L+ + + C Y+ R M ++ Y Y+++P I + ++ K +I+I DEAHN
Sbjct: 189 ALIRYCKEMGTCPYFTVRRMIPFCNIIIYSYHYLLDPKIADRVSRELSKDSIIIFDEAHN 248
Query: 295 IEDIARDAGSVDIDEDVLL----------------------KLQMELEQVCS-------- 324
I+++ ++ S+D+ EDVL KLQ E EQ+
Sbjct: 249 IDNVCIESLSLDLTEDVLKRATRGANKLAEAVEDMKAKDSEKLQNEYEQLVDGLRQAEVE 308
Query: 325 -------VNPMIYQPLIEMTQDLVGWIERRKATLA--KREFQHFFSCWTGDKALRELQEA 375
NP++ Q L++ + + G I + + +A KR ++ T K L + E
Sbjct: 309 REQEMFMSNPILPQDLLD--EAIPGNIRKGEHFIAFLKRFIEYL---KTRMKVLHVISET 363
Query: 376 NIS-RQCFPILLECATKAIKEATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSD 434
S Q L K +K ++ S L ++ I + F + ++ +
Sbjct: 364 PTSFLQHLKELTYIDKKPLKFCSERLSLLVKTLELTEIEDFNALKDIATFATLVSTYDTG 423
Query: 435 YQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSS 494
+QL L+ + S P L CL+ ++ K V E S+I+TSGT+SP++ +
Sbjct: 424 FQLILEPFETEGSTVPNP----MLHFTCLDASIAIKPVFERFSSVIITSGTISPLDMYPK 479
Query: 495 ELGVQFGTCLEAPHVIDVDLQ-VLTSVISTGPDNYPLNASYK------------------ 535
L F T ++ + + + + L +++ G D +++ ++
Sbjct: 480 MLN--FQTVIQESYAMTLARRSFLPMIVTKGSDQVSISSRFEIRNDPSVVRNYGSLLIEF 537
Query: 536 ---TADG-------YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYY 585
T DG Y ME + + W+ G + K + VE + + L+ Y
Sbjct: 538 AKITPDGMVVFFPSYLYMESIISMWQTMGVLDEVWKHKLILVETPDAQETS--LALETYR 595
Query: 586 NSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPN--- 642
+ S G +GA L+V RGK+ GI F +
Sbjct: 596 KACSNG------------------------------RGAVLLSVARGKVSEGIDFDHHYG 625
Query: 643 INDIQVSLKKKYNDTYRSSKNL--------LSGNEWYCNQAFRALNQAIGRCIRHRFDYG 694
+ + + +Y ++ L + N++ A R Q +GR +R + DYG
Sbjct: 626 RTVLMIGIPFQYTESRILKARLEFMRDHFQIKENDFLSFDAMRHAAQCLGRVLRGKDDYG 685
Query: 695 AIILLDERFQEERNRAHISKWLRKSIKQYD---SFDASLEGLKSFFRDVKGWVGKKMFNG 751
++L D RF R +A + KW+ +++ D S D +L K F R + K
Sbjct: 686 IMVLADRRFA--RKKAQLPKWIAQALNDSDTNLSTDMALATAKKFLRSLAQPTNPK---- 739
Query: 752 LENSDNDVDHVSSMDQCKEVTKQNTQ 777
D + V +DQ + KQ Q
Sbjct: 740 ----DQEGVSVWDIDQLEAYQKQYNQ 761
Score = 45.8 bits (107), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 46/83 (55%), Gaps = 6/83 (7%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+++ + V FPY + Y Q +M + TLD G+C +LE P+GTGK++SLL T+
Sbjct: 3 FYIDDLPVLFPYPRIYPEQYAYMSDIKKTLDVG---GNC--ILEMPSGTGKTISLLSLTV 57
Query: 77 AWQQNCKLKNQLANISHSKPDTE 99
A+Q + ++ S + + E
Sbjct: 58 AYQMHYPEHRKIVYCSRTMSEIE 80
>gi|431909160|gb|ELK12750.1| TFIIH basal transcription factor complex helicase subunit [Pteropus
alecto]
Length = 736
Score = 106 bits (265), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 170/724 (23%), Positives = 282/724 (38%), Gaps = 147/724 (20%)
Query: 122 PSTNGQTAQV---AMNNKNVKKKMTPTIFYASRTHSQISQVISEYKKTA----------Y 168
PS G+T + M + + Y SRT +I +VI E +K
Sbjct: 19 PSGTGKTVSLLALIMAYQRAYPLEVTKLIYCSRTVPEIEKVIEELRKLLSFYEKQEGEKL 78
Query: 169 RVPMAVLASRKHYCTNKYV---RDKENIDEECKLLLG---------DRNLGCPQFKNVHK 216
+ L+SRK+ C + V R +++D +C L D +L +F
Sbjct: 79 QFLGLALSSRKNLCIHPEVTPLRFGKDVDGKCHSLTASYVRAQYQQDHSLPHCRFYEEFD 138
Query: 217 VRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRG 276
+ G G +++++DL +G+ C Y+ AR A +V Y Y+++P I
Sbjct: 139 IHGRQVPLPAG---IYNLDDLKAMGRRQGWCPYFLARYSILHANVVVYSYHYLLDPKIAD 195
Query: 277 AMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQ----VCSVNPMIYQ 331
+ ++ + A+++ DEAHNI+++ D+ SV++ L + Q LE V + Q
Sbjct: 196 LVSKELARKAVVVFDEAHNIDNVCIDSMSVNLTRRTLDRCQGNLETLQKTVLRIKETDEQ 255
Query: 332 PLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRELQEANI-SRQCFPILLECAT 390
L + + LV + R+A+ A+ H + D+ L+E +I + + F L
Sbjct: 256 RLRDEYRRLVEGL--REASAARETDAHLANPVLPDEVLQEAVPGSIRTAEHFLGFLRRLL 313
Query: 391 KAIK-----EATDTESELPHLSGMS--------------------VITLE----GLFSSL 421
+ +K + ES LSG++ + TLE FS L
Sbjct: 314 EYVKWRLRAQHMVQESPPAFLSGLAQRVCIQRKPLRFCAERLRSLLHTLEIADLADFSPL 373
Query: 422 TYFFSRNGSHVSDYQLALQKYIK-RDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSII 480
T + + VS Y I+ D + P L C++ ++ K V E S+I
Sbjct: 374 T-LLANFATLVSTYAKGFTIIIEPFDDRTPTIT-NPILHFSCMDASLAIKPVFERFQSVI 431
Query: 481 LTSGTLSPMNSFSSELG---VQFGT--------CLEAPHVIDV--DLQVLTSVISTGPD- 526
+TSGTLSP++ + L V T CL P +I D +TS T D
Sbjct: 432 ITSGTLSPLDIYPKILDFHPVTMATFTMTLARVCL-CPMIIGRGNDQVTITSKFETREDI 490
Query: 527 -------NYPLNASYKTADG-------YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGG 572
N L S DG Y+ ME W E G + K LF+E + G
Sbjct: 491 AVIRNYGNLLLEMSAVVPDGIVAFFTSYQYMESTVASWYEQGILENIQRNKLLFIETQDG 550
Query: 573 SQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRG 632
++ + L+ Y + G +GA L+V RG
Sbjct: 551 AETS--VALEKYQEACENG------------------------------RGAILLSVARG 578
Query: 633 KIVVGIPFPN-INDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQ------------AFRAL 679
K+ GI F + + Y Y S+ L + E+ +Q A R
Sbjct: 579 KVSEGIDFVHHFGRAVIMFGVPY--VYTQSRILKARLEYLRDQFQIREKDFLTFDAMRHA 636
Query: 680 NQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYD---SFDASLEGLKSF 736
Q +GR IR + DYG ++ D+RF R + +W+++ + + + D ++ K F
Sbjct: 637 AQCVGRAIRGKTDYGLMVFADKRFTSADKRGKLPRWIQEHLSDSNLNLTVDEGVQVAKYF 696
Query: 737 FRDV 740
R +
Sbjct: 697 LRQM 700
>gi|452981101|gb|EME80861.1| hypothetical protein MYCFIDRAFT_20311, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 788
Score = 106 bits (264), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 149/659 (22%), Positives = 246/659 (37%), Gaps = 154/659 (23%)
Query: 146 IFYASRTHSQISQVISEYKKTAY-------------------RVPMAVLASRKHYCTNKY 186
+F+ SRTHSQ+SQ I E K+ + + L SRK+ C N
Sbjct: 192 VFFCSRTHSQLSQFIGELKRVSLPPGLPPEDNTGEQSSKLTEELKHLTLGSRKNLCINPK 251
Query: 187 VRDKEN---IDEECKLL-----LGDRNLGCPQFKNVHKV----RGHPSLQKGGCHEVHDI 234
V I+E C L GD+ K+ V R H + DI
Sbjct: 252 VNKLAGLTAINERCIELQQSNRAGDKKCSFLPTKDQQDVVLDFRDH------ALSRIRDI 305
Query: 235 EDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHN 294
EDL +G + C YYA+R+ A++ R A+ + +KG ++++DEAHN
Sbjct: 306 EDLAKLGSKLELCPYYASRAGIGPAEMS-----------AREALGISLKGHVVVIDEAHN 354
Query: 295 IEDIARDAGSVDIDEDVLLK--------LQMELEQVCSVNPMIYQPLIEMTQDLVGWIER 346
+ + S I E+ L + LQ ++ N ++ + L+ ++
Sbjct: 355 LMNAVEGIHSARITENQLRRAKEGLITYLQKFRNRLKGSNRTYVTQVVRVIDSLLSFVAS 414
Query: 347 RK------------ATLAKREFQHFFSCWTGDKALRELQEANISRQC--FPILLECATKA 392
K A LA + K R + E+ ++R+ + + + A
Sbjct: 415 VKDHNMSGNVTSPSALLAGKAVDQI----NLSKLSRYIDESKLARKVEGYIAFVAQSDTA 470
Query: 393 IKEATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRD----SK 448
IK+ T H + V TL H+ + L L K SK
Sbjct: 471 IKKEPST----IHHAAADVPTL---------------MHLQSFLLCLMNPSKEGRFLWSK 511
Query: 449 NPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSEL------------ 496
G L LN + F+ + E + ++IL GT+SPM + EL
Sbjct: 512 ESGNVEVQYL---LLNGSEHFRGIVEDARAVILAGGTMSPMEEYKQELFPYLTNEIKTFS 568
Query: 497 -------GVQFGTCLEAPH--VIDVDLQVLTSVISTGPDNYPLNASYKTADG-------Y 540
G F + A +D + + + + K G Y
Sbjct: 569 CGHLIPPGNLFVRAISADSQGRLDFSFKSRNDTTAMRLGQALIKIASKVQGGMVVFFPSY 628
Query: 541 KLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQED-FEIVLKHYYNSISQGSKCAVVRK 599
+E + W L++ KPLF + + S E+ F + + S+G+ V
Sbjct: 629 SYLETVLRTWTSQPLIPPLSSLKPLFSDSRSVSAEETFRSFTSAIHTNPSRGALLFSVIG 688
Query: 600 KRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYNDTYR 659
++ EG N + + R +VVG+P+PN+ + K +Y
Sbjct: 689 GKLS-EGINFSDDL----------------GRCVVVVGLPYPNLQAPDLKAKMEYLGA-- 729
Query: 660 SSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRK 718
G E+ N R++NQAIGR IRH+ D+ +I+L D RF++ R + + W+R+
Sbjct: 730 ------RGGEYAENLCMRSVNQAIGRVIRHKGDWASILLFDARFEDLRIKKKLPGWIRE 782
Score = 50.4 bits (119), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 28 PYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCKLKN 86
P+QPY Q FM V ++ Q + ESPTGTGKSLSL+C L W + K K
Sbjct: 7 PFQPYDIQQQFMEAVYDCIEHKQV-----GIFESPTGTGKSLSLICGALTWLREHKRKT 60
>gi|46126959|ref|XP_388033.1| hypothetical protein FG07857.1 [Gibberella zeae PH-1]
Length = 863
Score = 106 bits (264), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 95/355 (26%), Positives = 144/355 (40%), Gaps = 101/355 (28%)
Query: 458 LSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFG----TCLEAPHVIDVD 513
LS L+P F +A + ++IL GT+SP + + L T L HVI +
Sbjct: 536 LSYLLLSPTHAFSSIASSARAVILAGGTMSPFDDYKDHLFPSLEPEKVTTLSCGHVIPPE 595
Query: 514 LQVLTSVISTGPDNYPLNASYK---------------------TADG-------YKLMEK 545
+ ++ S+ P P S++ DG Y +++
Sbjct: 596 NLCVWTLASSRPGAPPFEFSFQKRGDPEMITQLGLAILNLCSLVPDGVVIFFPSYGYLDE 655
Query: 546 LCNRWRET------GQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRK 599
+ W+++ W RL +K LF E +G S E+ VL+ Y ++I QG
Sbjct: 656 VVAVWQKSQGASTQSVWDRLGTRKALFKETRGASSEE---VLQEYSDAI-QG-------- 703
Query: 600 KRVKREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNIN 644
E +N KGA L+V GK +V+G+P+PNI
Sbjct: 704 -----------------EKSNGKGALLLSVVGGKMSEGINFSDRLGRCVLVIGLPYPNIA 746
Query: 645 DIQVSLKKKYNDTYRS--------------SKNLLSGNEWYCNQAFRALNQAIGRCIRHR 690
K +Y +T SK + ++Y N RA+NQ+IGR IRHR
Sbjct: 747 SPDWKAKIEYIETTTRNNLVAQGTTHEEAVSKAKQTARDFYENACMRAVNQSIGRAIRHR 806
Query: 691 FDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGL----KSFFRDVK 741
DY AI+L+D R+ +R R + W+R + DS + L GL FFR K
Sbjct: 807 GDYAAIVLVDRRYGTDRIRGKLPGWIRGGLVG-DSHEKGLGGLMGAVGGFFRGKK 860
Score = 81.3 bits (199), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 89/183 (48%), Gaps = 21/183 (11%)
Query: 146 IFYASRTHSQISQVISEYKKTAY-----------------RVPMAVLASRKHYCTNKYVR 188
I+Y SRTHSQ+SQ I+E ++ ++ V + L+SR+ C N V
Sbjct: 208 IYYTSRTHSQLSQFITELRRPSFPPSLPTSLSKQEETKTEAVKLLPLSSRQRLCINPSVS 267
Query: 189 ---DKENIDEECKLLLGDRN-LGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVV 244
+ I++ C L ++ CP + + + DIEDL +G+ +
Sbjct: 268 RLGSVQAINDRCSELQQPKSGQKCPFVPKEDLLSQTHQFRDSALATLPDIEDLHQLGKSL 327
Query: 245 RGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGS 304
C YYA+R+ A+++ PY ++ R A+ V ++G+I+I+DEAHNI D + +
Sbjct: 328 AVCPYYASRTALPGAEIITLPYPLLLQKSARDALGVKLEGSIVIVDEAHNIMDAVANVHA 387
Query: 305 VDI 307
+I
Sbjct: 388 AEI 390
Score = 53.5 bits (127), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 35/56 (62%), Gaps = 3/56 (5%)
Query: 28 PYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCK 83
PY PY Q FM V L+ +G +LESPTGTGKSLSL+C++L W +N K
Sbjct: 21 PYTPYDVQEQFMKAVYDVLESG--NGQV-GILESPTGTGKSLSLICASLTWLRNHK 73
>gi|47214240|emb|CAG12459.1| unnamed protein product [Tetraodon nigroviridis]
Length = 204
Score = 106 bits (264), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/167 (37%), Positives = 90/167 (53%), Gaps = 23/167 (13%)
Query: 402 ELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQK------YIKRDSKNPGGNWT 455
++P +S + I L+GLF L Y F + S DY++ALQ+ + D+ + G +
Sbjct: 13 QVPTISSATSIVLKGLFMVLDYLFRDSCSFAEDYRVALQRSFAWTNQVPPDAPDAQGFFG 72
Query: 456 H----------------TLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQ 499
T+S WCLNPAV F D+ + SI+LTSGTLSPM SFSSELGV+
Sbjct: 73 RPHQRQRRSIRVKSEVLTVSFWCLNPAVAFSDLGDAVRSIVLTSGTLSPMASFSSELGVK 132
Query: 500 FGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTADGYKLMEKL 546
F LEA HVI+ QV + GP L A+++ A+ Y +++
Sbjct: 133 FSIQLEANHVINKS-QVWVGTVGAGPHGKKLCATFQQAETYTFQDEV 178
>gi|441670170|ref|XP_004092177.1| PREDICTED: probable ATP-dependent RNA helicase DDX11 [Nomascus
leucogenys]
Length = 970
Score = 106 bits (264), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 149/646 (23%), Positives = 249/646 (38%), Gaps = 181/646 (28%)
Query: 146 IFYASRTHSQISQVISEYKKTAYR--VPMAVLASRKHYCTNKYVRD---KENIDEECKLL 200
I+Y SRTHSQ++Q + E KK+ + V + L SR++ C N+ V+ + I++ C +
Sbjct: 229 IYYCSRTHSQLAQFVHEVKKSPFGKDVRLVSLGSRQNLCVNEDVKSLGSVQLINDRCVDM 288
Query: 201 LGDRNL-------------------GCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVG 241
R+ CP F N H+ G L+ +V DIE L+ +G
Sbjct: 289 QRSRHEKKKGAEEEKPKRRRQEKQAACP-FYN-HEQMG--LLRDEALADVKDIEQLLALG 344
Query: 242 QVVRGCSYYAARSMADDAQLVFCPYSYIINPVIR-------------------------G 276
+ R C YY +R AQLV PY +++ R G
Sbjct: 345 KEARACPYYGSRLAIPAAQLVVLPYQMLLHAATRQAAGIRLQDQVVIIDEAHNLIDTITG 404
Query: 277 AMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMEL----------------- 319
V++ G+ L + ++ + R + + LK + L
Sbjct: 405 MHSVEVSGSQLCQAHSQLLQYMERYGKRLKAKNLMYLKQILYLLEKFVAVLGGNIKQNPN 464
Query: 320 --------EQVCSVNPMIYQPLIE---------------MTQDLVGWIERRKATLAKRE- 355
++ ++N ++Q I+ +++ L G+ ER A L+ RE
Sbjct: 465 TQSLSQTGTELKTINDFLFQSQIDNINLFKVQRYCEKSMISRKLFGFTERYGAVLSSREQ 524
Query: 356 -----FQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMS 410
FQ F L+ LQ T+A+ D
Sbjct: 525 PKLAGFQQF---------LQSLQPRT-------------TEALAAPADESQASAPRPASP 562
Query: 411 VITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFK 470
++ +EG ++LT +++G + Q +L + TL LNPAV F
Sbjct: 563 LMHIEGFLAALTTA-NQDGRVILSRQGSLSQ--------------STLKFLLLNPAVHFA 607
Query: 471 DVAELSLSIILTSGTLSPMNSFSSEL----GVQFGTCLE--APHVIDVDLQVLTSVISTG 524
V + ++++ GT+ P++ F +L GV+ +E HVI D +L VI +G
Sbjct: 608 QVVKECRAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHVIPPD-NILPLVICSG 666
Query: 525 PDNYPLNASYKTADGYKLMEK----LCN------------------------RWRETGQW 556
N PL +++ + ++M++ LCN W + G
Sbjct: 667 ISNQPLEFTFQKRELPQMMDEAGRILCNLCGVVPGGVVCFFPSYEYLRQVHAHWEKGGLL 726
Query: 557 SRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQ 616
RL A+K +F EPK Q E VL Y I QG C ++R + G L+ + +
Sbjct: 727 DRLAARKKIFQEPKSAHQ--VEQVLLAYSRCI-QG--CG---QERGRVTGALLLSVVGGK 778
Query: 617 ENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYNDTYRSSK 662
+ + L C ++VG+PFPNI ++ K Y D S +
Sbjct: 779 MSEGINFSDNLGRC--VVMVGMPFPNIRSPELQEKMAYLDQTLSPR 822
Score = 54.3 bits (129), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 38/68 (55%), Gaps = 5/68 (7%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
VG I FP+ PY Q FM + L+ + + ESPTGTGKSLSL+C L+W
Sbjct: 8 VGAIHFPFPFTPYSIQEDFMAELYRVLEAGK-----IGIFESPTGTGKSLSLICGALSWL 62
Query: 80 QNCKLKNQ 87
++ + K +
Sbjct: 63 RDFEQKKR 70
>gi|308810260|ref|XP_003082439.1| DNA repair/transcription factor protein (ISS) [Ostreococcus tauri]
gi|116060907|emb|CAL57385.1| DNA repair/transcription factor protein (ISS) [Ostreococcus tauri]
Length = 792
Score = 106 bits (264), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 157/703 (22%), Positives = 275/703 (39%), Gaps = 159/703 (22%)
Query: 146 IFYASRTHSQISQVISEYKKT-AY----------RVPMAVLASRKHYCTNKYVRD---KE 191
I Y +RT ++ +V+ E K AY R+ L+SRK+ C N V D +E
Sbjct: 94 IIYCTRTVPEMEKVLEEMKALQAYIEKELGAETARMLSLGLSSRKNMCVNPAVADEGSRE 153
Query: 192 NIDEECKLLL--------------------------GDRNLG---CPQFKNVHKVRGHPS 222
++D C+ L GD G C F+ G +
Sbjct: 154 SVDGRCRRLTASWVRERRLERQARDAGRTVAAEDGEGDNEGGVSCCDWFEEFETA-GEKA 212
Query: 223 LQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINP----VIRGAM 278
+ G + +HD+ G+ + C Y+ AR+M A ++ Y Y+++P ++ A+
Sbjct: 213 VLPPGVYTLHDLRQF---GRAKKWCPYFLARNMISFANVIVYNYQYMLDPKVASLVSSAL 269
Query: 279 EVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQVCSVNPMIYQPLIEMTQ 338
E K +++ DEAHNI+++ +A SV++ + L+ + S+N I + +
Sbjct: 270 E---KECVVVFDEAHNIDNVCIEALSVNLRQQT---LENAGRSITSLNARIDKAKQTDER 323
Query: 339 DLVGWIERRKATLAKREFQHFFSCWTG----------DKALRELQEANISR-QCFPILLE 387
L ER LA+ Q + G D LRE NI R + F +L+
Sbjct: 324 RLRQEYERLVNGLAQ---QGVLARGGGEDMLMNPVIPDDILREAVPGNIRRAEHFVAVLK 380
Query: 388 CATKAIKEATDTESELPHLSGMSVITLEGLFSS--LTYFFSRNGSHVSDYQLALQKYI-- 443
+ +K + +G+ TL+ L S + +R G H ++ + +
Sbjct: 381 RFVEYLKFRLQSTQHCAANAGIDGKTLKVLLRSPDESVEDARGGRHGRVQRIVVGGELCC 440
Query: 444 -KRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGT 502
+ D G +HT +L CL+ ++ K V E S+ +TSGTLSP++ + LG
Sbjct: 441 ARGDIFQ--GFRSHTRALACLDASLAIKPVFERFQSVFITSGTLSPIDLYPKLLGFN-PV 497
Query: 503 CLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTAD------------------------ 538
C ++ + + VI+ G D ++ + D
Sbjct: 498 CAKSLEMTLTRECLCPMVITRGADQQAVSTKFDVRDDPNVIQNYGRILVGLAQTVPDGIV 557
Query: 539 ----GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKC 594
Y ME + ++W ETG + K +F+E + + L +Y + + G
Sbjct: 558 AFFVSYSYMENIVSKWHETGILREIMQHKLVFIETTDVVETS--LALDNYRRACNCG--- 612
Query: 595 AVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKY 654
+GA FL+V RGK+ GI F V + Y
Sbjct: 613 ---------------------------RGAIFLSVARGKVAEGIDFDRHYGRAVVM---Y 642
Query: 655 NDTYRSS-KNLLSGNEWYCNQ----------AFRALNQA---IGRCIRHRFDYGAIILLD 700
Y+ + +L Y + AF A+ QA +GR IR + DYG ++ D
Sbjct: 643 GVPYQYTLSRILRARLEYLRETFQIKESDFLAFDAVRQAAQCVGRVIRSKKDYGLMVFAD 702
Query: 701 ERFQEERNRAHISKWLRKSIKQYD---SFDASLEGLKSFFRDV 740
+R+ + R + W+ + + S D +++ ++F R +
Sbjct: 703 KRYNSQDKRGKLPGWITSHLHEEVLNLSTDMAMQVARTFMRSM 745
>gi|121701205|ref|XP_001268867.1| TFIIH complex helicase Rad3, putative [Aspergillus clavatus NRRL 1]
gi|119397010|gb|EAW07441.1| TFIIH complex helicase Rad3, putative [Aspergillus clavatus NRRL 1]
Length = 771
Score = 106 bits (264), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 151/690 (21%), Positives = 285/690 (41%), Gaps = 136/690 (19%)
Query: 146 IFYASRTHSQISQVISEYKK-TAYRVPMAV---------LASRKHYCTNKYVRDKEN--- 192
+ Y SRT S+I + ++E K+ YR L SRK+ C + V+ +++
Sbjct: 45 LIYCSRTMSEIEKALAELKELMKYRTQQLGYTEDFRALGLTSRKNLCLHPSVKREKSGAV 104
Query: 193 IDEECKLLL----------GDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQ 242
+D C+ L G+ C +N+ + H + G V ++ L+ G+
Sbjct: 105 VDARCRSLTAGFVKEKKERGEDVELCIYHENLDLLEPHNLVPPG----VFTLDGLLKYGE 160
Query: 243 VVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARD 301
+ C Y++AR M ++ Y Y+++P I + ++ K I++ DEAHNI+++ +
Sbjct: 161 EHKQCPYFSARRMMPYCNVIIYSYHYLLDPKIAERVSRELSKDCIVVFDEAHNIDNVCIE 220
Query: 302 AGSVDIDEDVLLK-------LQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKR 354
A S+DI ED L K L+ +++++ S + + L LV + + +
Sbjct: 221 ALSIDITEDSLRKATKGANNLERKIQEMKSSDA---EKLQNEYSKLVEGLREAEQAREEE 277
Query: 355 EFQHFFSCWTGDKALRELQEANISR-QCFPILLECATKAIK---EATDTESELP-----H 405
+F + D L+E NI R + F L+ + +K + T T SE P H
Sbjct: 278 QF--IANPVLPDDLLKEAVPGNIRRAEHFVAFLKRFIEYLKTRMKVTHTISETPPSFLTH 335
Query: 406 LSGMSVI-----------------TLEGL-------FSSLTYFFSRNGSHVSDYQLALQK 441
+ ++ I TLE + + F + ++ + L L+
Sbjct: 336 VKDLTFIERKPLRFCAERLTSLVRTLELINIEDYQPLQEVATFATLVATYEKGFLLILEP 395
Query: 442 YIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFG 501
+ + P L CL+ ++ K V + S+I+TSGTLSP+ + L F
Sbjct: 396 FESEAATVPNP----ILHFTCLDASIAIKPVFDRFSSVIITSGTLSPLEMYPKML--DFD 449
Query: 502 TCLEAPHVIDVDLQ-VLTSVISTGPDNYPLNASYK---------------------TADG 539
T L+ + + + + L +++ G D +++S++ T DG
Sbjct: 450 TVLQESYSMTLARRSFLPMIVTRGSDQAQISSSFQIRNDPGVVRNYGNLVLEFSRITPDG 509
Query: 540 -------YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGS 592
Y ME + + W+ G + K + VE + + L+ Y + G
Sbjct: 510 IVVFFPSYLYMESIVSMWQGMGILDSIWNYKLILVETPDAQESS--LALETYRTACCNGR 567
Query: 593 KCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKK 652
+ R K D + + G R + +G+PF + +
Sbjct: 568 GAILFCVARGKVSEGIDFD--------HHYG-------RAVLCIGVPFQYTESRILKARL 612
Query: 653 KY-NDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAH 711
++ + YR + N++ A R Q +GR +R + DYG ++L D RFQ++RN+
Sbjct: 613 EFLRENYR-----IRENDFLSFDAMRHAAQCLGRVLRGKDDYGVMVLADRRFQKKRNQ-- 665
Query: 712 ISKWLRKSIKQYD---SFDASLEGLKSFFR 738
+ KW+ +++ + + S D ++ K+F R
Sbjct: 666 LPKWISQAMLESETNLSTDMAVATAKNFLR 695
>gi|385302835|gb|EIF46944.1| dna repair helicase rad3 [Dekkera bruxellensis AWRI1499]
Length = 803
Score = 106 bits (264), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 167/735 (22%), Positives = 293/735 (39%), Gaps = 173/735 (23%)
Query: 122 PSTNGQTAQVAMNNKNVKKKMT----PTIFYASRTHSQISQVISEYKKTA-YRVPMAV-- 174
PS G+T +A+ +V +M I Y SRT S+I + + E + YR
Sbjct: 43 PSGTGKT--IALLALSVAYQMYYPEHRKIIYCSRTMSEIEKALIELEXLMDYRAKELGHV 100
Query: 175 -------LASRKHYCTNKYVRDKEN---IDEECKLLLGDRNLGCPQFKNVHKVRGHPSLQ 224
L SRK+ C + V ++ +DE C+ L + LG KVR +
Sbjct: 101 ENFRGLGLTSRKNLCLHPVVGKEKKGTVVDEMCRRLTNGQ-LG-------EKVRAGEANA 152
Query: 225 KGGC--HE--------------VHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSY 268
C HE V+ + L++ + C Y+ R M +V Y Y
Sbjct: 153 DELCSWHEKLYEKDPANLIPPGVYSFQQLLDYCKQEGTCPYFTVRRMMPLCNIVIYSYHY 212
Query: 269 IINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLK-------LQMELE 320
II+P + + D+ K +I+I DEAHNI+++ +A S+DIDED+L + L +++
Sbjct: 213 IIDPKVAVRVSKDLSKDSIVIFDEAHNIDNVCIEALSMDIDEDMLQRATRGANDLSRKVD 272
Query: 321 QVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFF-SCWTGDKALRELQEANISR 379
QV V+ Q + + LV + R++ + K + F + L+E +I R
Sbjct: 273 QVKKVDSSRLQ---DEYEKLVAGL--RESDMLKESEEPFMENPILPSDVLQEAIPGSIRR 327
Query: 380 --------QCFPILLECATKAIKEATDT-ESELPHLSGMSVI-----------------T 413
+ F L+ K + ++T S L HL ++ I T
Sbjct: 328 AEHFISFMKRFIEYLKTRMKVLHVISETPTSFLQHLKQLTYIDRKPLRFCSERLSMLVRT 387
Query: 414 LEGL----FSSL---TYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPA 466
LE F+SL F + ++ + + L L+ Y ++ P L C++ +
Sbjct: 388 LEVXDIEEFTSLKDIATFATLVSTYENGFMLILEPYETENATVPNP----ILRFTCMDAS 443
Query: 467 VVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVIST-GP 525
+ K V + S+++TSGT+SP++ + L F T ++ + + +D + +I T G
Sbjct: 444 IAIKPVFDRFPSVVITSGTISPLDMYPRMLN--FDTVVQESYAMTLDRRAFLPLIVTKGS 501
Query: 526 DNYPLNASYK---------------------TADG-------YKLMEKLCNRWRETGQWS 557
D +++ ++ T DG Y ME + + W+ G
Sbjct: 502 DQVAISSRFEIRNDPSVVRNYGTLLMEFVKITPDGMVVFFPSYLYMESIISMWQGMGILD 561
Query: 558 RLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQE 617
+ K + VE + + L+ Y + G
Sbjct: 562 EVWKYKLILVETPDAQET--ALALETYRKACLNG-------------------------- 593
Query: 618 NANKKGASFLAVCRGKIVVGIPFPNI---NDIQVSLKKKYNDTYRSSKNL--------LS 666
+GA L+V RGK+ GI F + + + + +Y ++ L +
Sbjct: 594 ----RGAVLLSVARGKVSEGIDFDHYYGRTVLMIGIPFQYTESRILKARLEFLRDNYQIR 649
Query: 667 GNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYD-- 724
N++ A R Q +GR +R + DYG ++L D RF R R+ + KW+ + + +
Sbjct: 650 ENDFLSFDAMRHAAQCLGRVLRGKDDYGVMVLADRRFL--RKRSQLPKWIAQGLLDANVN 707
Query: 725 -SFDASLEGLKSFFR 738
S D ++ K F R
Sbjct: 708 LSTDMAIAAAKKFLR 722
>gi|406859189|gb|EKD12258.1| tfiih complex helicase [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 786
Score = 106 bits (264), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 151/684 (22%), Positives = 276/684 (40%), Gaps = 127/684 (18%)
Query: 146 IFYASRTHSQISQVISEYKK-TAYRVPMAV---------LASRKHYCTNKYVRDKEN--- 192
+ Y SRT S+I + + E + YR M L SRK+ C + V+ +++
Sbjct: 45 LIYCSRTMSEIEKALFELEALMKYRAEMLGHEEEFRGLGLTSRKNLCLHPSVKREKSGTV 104
Query: 193 IDEECKLLL----------GDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQ 242
+D C+ L G+ C N+ + H + G V E ++ G+
Sbjct: 105 VDARCRSLTAGFVKEKKERGEDVPVCIYHDNLDLLEPHDLIPNG----VWTFEGILKYGE 160
Query: 243 VVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARD 301
+ C Y+ +R M ++ Y Y+++P I + ++ K I++ DEAHNI+++ +
Sbjct: 161 EHKQCPYFTSRRMMSFCNVIIYSYHYLLDPKIAERVSKELSKDCIVVFDEAHNIDNVCIE 220
Query: 302 AGSVDIDEDVLLKLQMELEQV-CSVNPMIYQPLIEMTQDLVGWIE-RRKATLAKREFQHF 359
+ S DI ED L K + + + M ++ + +E R A A++E
Sbjct: 221 SLSTDITEDSLRKATRGAQNLEIKITDMKNSDADKLKSEYAKLVEGLRDADDARQEDAFM 280
Query: 360 FSCWTGDKALRELQEANISRQCFPI-----LLECATKAIKEATDTE-SELPHLSGMSVIT 413
+ D L+E NI R I LL+ K + ++T S L HL + I
Sbjct: 281 SNPALPDDLLKEAVPGNIRRAEHFITSESDLLQTRMKVRQVISETPPSFLAHLKEYTFIE 340
Query: 414 LEGL------FSSLTYFFSRNGSHVSDYQ--------------------LALQKYIKRDS 447
+ L +SL + +++ DYQ L L+ Y +
Sbjct: 341 KKPLRFCAERLTSLVR--TLELTNIEDYQPLQEVATFATLVATYEKGFVLILEPYESDTA 398
Query: 448 KNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAP 507
+ P L CL+ A+ K V + S+I+TSGT+SP+ + LG F ++
Sbjct: 399 EVPNP----VLHFACLDAAIAIKPVFDRFSSVIITSGTISPLEMYPKMLG--FTAVVQES 452
Query: 508 HVIDVDLQ-VLTSVISTGPDNYPLNASYK---------------------TADG------ 539
+ + + + L +++ G D +++ ++ T DG
Sbjct: 453 YTMTLARRSFLPMIVTRGSDQVAISSGFQVRNEPSVVRNYGHLLTEFSKLTPDGMVVFFP 512
Query: 540 -YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVR 598
Y ME + + W+ G + K + VE + + L Y + + G ++
Sbjct: 513 SYLYMESIISMWQGMGILDEVWKNKLILVETPDAQETS--LALDTYRTACNNGRGAILLC 570
Query: 599 KKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKY-NDT 657
R K D + N+ G R + +G+PF + + ++ +T
Sbjct: 571 VARGKVSEGIDFD--------NQYG-------RTVLCIGVPFQYTESRILKARLEFLRET 615
Query: 658 YRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLR 717
YR + N++ A R Q +GR +R + DYG ++L D RF ++RN+ + KW+
Sbjct: 616 YR-----IRENDFLSFDAMRHAAQCLGRVLRGKDDYGIMVLADRRFLKKRNQ--LPKWID 668
Query: 718 KSIKQYD---SFDASLEGLKSFFR 738
++ + + S D ++ K F R
Sbjct: 669 DAMHEAEVNLSTDTAVGTAKKFLR 692
>gi|400593003|gb|EJP61017.1| DNA repair helicase RAD3 [Beauveria bassiana ARSEF 2860]
Length = 749
Score = 106 bits (264), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 157/715 (21%), Positives = 284/715 (39%), Gaps = 139/715 (19%)
Query: 122 PSTNGQTAQ-----VAMNNKNVKKKMTPTIFYASRTHSQISQVISEYKK-TAYRVPMAV- 174
PS G+T VA +K+ + Y SRT S+I + + E + YR
Sbjct: 2 PSGTGKTVSLLSLIVAYQQSMPEKR---KLIYCSRTMSEIEKALMELEALMKYRTEQLGH 58
Query: 175 --------LASRKHYCTNKYVRDKEN---IDEECKLLL----------GDRNLGCPQFKN 213
L SRK+ C + V+ +++ +D C+ L G+ C N
Sbjct: 59 EEDFRGLGLTSRKNLCLHPSVKREKSGSVVDARCRSLTAGFVKEKKERGENVDLCVYHDN 118
Query: 214 VHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPV 273
+ + H + G V + ++ G+ + C Y+ AR M +V Y Y+++P
Sbjct: 119 LDLLESHNLIPNG----VWTFDGILRYGEEHKQCPYFTARRMMQYCNVVIFSYHYLLDPK 174
Query: 274 IRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLK----LQMELEQVCSVNPM 328
I + D K I++ DEAHNI+++ ++ S DI ED L + Q +++ +
Sbjct: 175 IAERVTKDFSKDCIVVFDEAHNIDNVCIESLSTDITEDSLRRATRGAQNLKQKIADMRET 234
Query: 329 IYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRELQEANISR-QCFPILLE 387
+ L + LV + R+A A++E + ++ LRE NI R + F L+
Sbjct: 235 DQEQLQNEYEKLVQGL--READEARQEDAFMANPVLPEELLREAVPGNIRRAEHFVSFLQ 292
Query: 388 CATKAIKEATDTESELP-----HLSGMSVITLEGL------FSSLTYFFSRNGSHVSDYQ 436
+ +K SE P HL + I + L +SL + +++ DYQ
Sbjct: 293 RFIEYLKAGAPVISETPPSFLAHLKEHTFIEKKPLGFCAERLTSLVR--TLELTNIDDYQ 350
Query: 437 --------------------LALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELS 476
L L+ Y ++ P L CL+ A+ + V +
Sbjct: 351 PLQEVATFATLVATYDKGFLLILEPYESDTAEVPNP----ILHFTCLDAAIAIRPVFDRF 406
Query: 477 LSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQ-VLTSVISTGPDNYPLNASYK 535
S+I+TSGT+SP+ + L F T ++ + + + + L +++ G D ++ S++
Sbjct: 407 YSVIITSGTISPLEMYPKML--DFSTVIQESYSMTLARRSFLPMIVTRGSDQASISTSFQ 464
Query: 536 ---------------------TADG-------YKLMEKLCNRWRETGQWSRLNAKKPLFV 567
T DG Y ME + + W+ G + K + V
Sbjct: 465 VRNEPSVVRNYGNLLTEFAKITPDGLVVFFPSYLYMESIISMWQGMGILDEVWKYKLILV 524
Query: 568 EPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFL 627
E + + L+ Y + G ++ R K D + ++ G
Sbjct: 525 ETPDAQETS--LALETYRTACCNGRGAILLCVARGKVSEGIDFD--------HQYG---- 570
Query: 628 AVCRGKIVVGIPFPNINDIQVSLKKKY-NDTYRSSKNLLSGNEWYCNQAFRALNQAIGRC 686
R + +G+PF + + ++ +TYR + N++ A R Q +GR
Sbjct: 571 ---RTVLCIGVPFQYTESRILKARLEFLRETYR-----IKENDFLSFDAMRHAAQCLGRV 622
Query: 687 IRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYD---SFDASLEGLKSFFR 738
+R + DYG ++L D RFQ + R + KW+ + + D S D ++ + F +
Sbjct: 623 LRGKDDYGIMVLADRRFQ--KKRPQLPKWINQGLMDVDVNLSTDMAVSSARRFLK 675
>gi|3850576|gb|AAC72116.1| Strong similarity to gb|U04968 nucleotide excision repair protein
(ERCC2) from Cricetulus grisseus [Arabidopsis thaliana]
Length = 735
Score = 105 bits (263), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 173/825 (20%), Positives = 305/825 (36%), Gaps = 233/825 (28%)
Query: 18 YHVGGIQVEFPYQ-PYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+ + + V FPY Y Q +M + LD GHC LLE PTGTGK+++LL
Sbjct: 3 FKIEDVTVYFPYDNIYPEQYEYMVELKRALDAK---GHC--LLEMPTGTGKTIALLSLIT 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNK 136
+++ S+PD+ P+
Sbjct: 58 SYRL-------------SRPDS-----PI------------------------------- 68
Query: 137 NVKKKMTPTIFYASRTHSQISQVISEYK----------KTAYRVPMAVLASRKHYCTNKY 186
+ Y +RT ++ + + E K T ++ L+SRK+ C N
Sbjct: 69 --------KLVYCTRTVHEMEKTLGELKLLHDYQVRHLGTQAKILALGLSSRKNLCVNTK 120
Query: 187 VRDKEN---IDEECKLLLGD--RNLG--------CPQFKNVHKVRGHPSLQKGGCHEVHD 233
V EN +D C+ R L C F+N K + L G V+
Sbjct: 121 VLAAENRDSVDAACRKRTASWVRALSTENPNVELCDFFENYEKAAENALLPPG----VYT 176
Query: 234 IEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEA 292
+EDL G+ C Y+ AR M A ++ Y Y+++P + G + ++ K ++++ DEA
Sbjct: 177 LEDLRAFGKNRGWCPYFLARHMIQFANVIVYSYQYLLDPKVAGFISKELQKESVVVFDEA 236
Query: 293 HNIEDIARDAGSVDIDEDVLLKLQMELEQV-CSVNPMIYQPLIEMTQDLVGWIERRKATL 351
HNI+++ +A SV + L L ++ ++ Y +IE+ Q LVG + A
Sbjct: 237 HNIDNVCIEALSVSVRRVTLEGANRNLNKIRQEIDSSYY--IIEIVQ-LVGRFKATDAGR 293
Query: 352 AKREFQHFFSC------------WTGDKA-----LRELQEANISR-QCFPILLECATKAI 393
+ E+ W + A L+E NI R + F +L + +
Sbjct: 294 LRAEYNRLVEGLALRGDLSGGDQWLANPALPHDILKEAVPGNIRRAEHFVHVLRRLLQYL 353
Query: 394 KEATDTE-----------SELPHLSGMSVITLEGLFSSLTY------------------- 423
DTE S L +G+ TL+ + L
Sbjct: 354 GVRLDTENVEKESPVSFVSSLNSQAGIEQKTLKFCYDRLQSLMLTLEITDTDEFLPIQTV 413
Query: 424 --FFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIIL 481
F + G++ + + ++ Y +R P L L C + ++ K V + S+++
Sbjct: 414 CDFATLVGTYARGFSIIIEPYDERMPHIPDP----ILQLSCHDASLAIKPVFDRFQSVVI 469
Query: 482 TSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQ-VLTSVISTGPDNYPLNASYK----- 535
TSGTLSP++ + L F + + + + V++ G D P++ +
Sbjct: 470 TSGTLSPIDLYPRLL--NFTPVVSRSFKMSMTRDCICPMVLTRGSDQLPVSTKFDMRSDP 527
Query: 536 ----------------TADG-------YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGG 572
DG Y M+ + W ETG + +K +F+E
Sbjct: 528 GVVRNYGKLLVEMVSIVPDGVVCFFVSYSYMDGIIATWNETGILKEIMQQKLVFIE---- 583
Query: 573 SQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRG 632
+Q+ E L ++ + C +GA F +V RG
Sbjct: 584 TQDVVETTLA--LDNYRRACDCG--------------------------RGAVFFSVARG 615
Query: 633 K---------------IVVGIPFP-NINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAF 676
K ++ G+PF ++ I + + +DT++ + ++ A
Sbjct: 616 KVAEGIDFDRHYGRLVVMYGVPFQYTLSKILRARLEYLHDTFQ-----IKEGDFLTFDAL 670
Query: 677 RALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIK 721
R Q +GR IR + DYG +I D+R+ R+ + W+ ++
Sbjct: 671 RQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLR 715
>gi|398018175|ref|XP_003862272.1| helicase-like protein [Leishmania donovani]
gi|322500501|emb|CBZ35578.1| helicase-like protein [Leishmania donovani]
Length = 1279
Score = 105 bits (263), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 104/375 (27%), Positives = 168/375 (44%), Gaps = 72/375 (19%)
Query: 25 VEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCKL 84
+ P+ PY Q + + L A A++E PTG GK+++LL S L +QQ K
Sbjct: 197 LALPFTPYPVQQEMIRMIADVLHSASPHVVPVAVVEVPTGCGKTMALLSSVLRYQQELKR 256
Query: 85 KNQL---ANISHSKPDTEAVTDP-----------------LAN-GGGFIPESQPST---- 119
K+ A + +P E P LA GG I ++ T
Sbjct: 257 KSPKELDAYLRQRRPSGEKRKAPPKGRRGQRGPQQRGAARLAPVAGGDIDANEGDTDDEC 316
Query: 120 -----IPPS------TNGQTAQVA----MNNKNVKKKMTP---TIFYASRTHSQISQVIS 161
+PPS N Q A ++ ++++ P T++Y +RTH+Q+ Q +
Sbjct: 317 TDGWSVPPSFFKHFRVNSQRKIRAELDVAGSQELRRRFLPPPCTVYYVTRTHAQLRQAVR 376
Query: 162 EYKK---TAYRVPMAVLASRKHYCTNKYVRDKE----------NIDEECKLLLGDRNLGC 208
E ++ + M +L SR+ YC + V + N+ E C L+ +LG
Sbjct: 377 ELRRLHGATSAIRMNILGSRERYCIHPKVMASKANHTLPVQGNNLGEVCDKLV---SLGL 433
Query: 209 PQFKNVH------KVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLV 262
+ + + + G Q+G ++ D+EDLV G C YYAAR + A +
Sbjct: 434 CEMVDKYDELSCSAITGPVGHQRG---QIWDMEDLVLEGTSRHMCPYYAARDLVFYADVN 490
Query: 263 FCPYSYIINPVIR--GAMEVDIK-GAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMEL 319
FC Y Y+++P+IR ME +K A+++ DEAHN+ + +DA S++ VL + EL
Sbjct: 491 FCTYPYLLDPLIRHETKMEAALKNNAVVVFDEAHNVAAVCQDALSLECPRAVLALILSEL 550
Query: 320 EQVCSVN-PMIYQPL 333
E + S P+ QPL
Sbjct: 551 EPLVSNQVPLARQPL 565
Score = 94.0 bits (232), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 86/374 (22%), Positives = 155/374 (41%), Gaps = 64/374 (17%)
Query: 457 TLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQ--FGTCLEAPHVI---D 511
T+ L CL+ ++ F + + ++L SGTLSP + +LGV+ LE HV+
Sbjct: 797 TIDLRCLDGSLAFSYLLKTVHRVVLASGTLSPFPQLARDLGVEASLWRTLEGLHVVPPTQ 856
Query: 512 VDLQVLTSV----------ISTGPDNYPLNASYKTADGYKLMEKLCNRWRETGQWSRLNA 561
L LT++ +T P PL ++ + ++ + + Q R ++
Sbjct: 857 YSLTALTALPVSSSSTHDGTTTQPLLLPLRCTHASLSNPVFLKTVARAVVQLTQTLRESS 916
Query: 562 KK------PLFVEPKGGSQEDFEIVL----KHYYNSISQGSKCAVVRKKRVKREGNNDLN 611
P + ++ E++L + + S + + + R L
Sbjct: 917 GGGVLLFVPNYAVLTALAKLTREVLLVAQREQQHQSPHAAAPTQLFLEPRKAEALTEVLC 976
Query: 612 TIESQENANKKGASFL-AVCRGKI---------------VVGIPFPNINDIQVSLKKKYN 655
++ A + G + L +V RGK+ +G+P + +V ++ Y
Sbjct: 977 QFQNCTQAPRCGTALLFSVYRGKVSEGLDFTDDMARLVLCLGLPLQPLKSWKVIAQRAY- 1035
Query: 656 DTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKW 715
SG++WY A RA+NQA+GRC+RH DYGA++LLDER+ + + +SKW
Sbjct: 1036 ----------SGSDWYTTDAVRAVNQALGRCLRHTKDYGAVVLLDERYAQPEYQERLSKW 1085
Query: 716 LRKSIKQYDSFDASLEGLKSFFRDVKGWVGKKMFNGLENSDNDV-------DHVSSMDQC 768
R +++ S GL++ F W ++ F L S + + D D
Sbjct: 1086 CRATLQTESSLPQLCAGLRTSFTQ---W--RRAFGALAMSTSPLPTPSAAADRAVPWDDI 1140
Query: 769 KEVTKQNTQELNKS 782
V Q+ L ++
Sbjct: 1141 GGVAHQDAASLART 1154
>gi|146092080|ref|XP_001470201.1| helicase-like protein [Leishmania infantum JPCM5]
gi|134084995|emb|CAM69394.1| helicase-like protein [Leishmania infantum JPCM5]
Length = 1276
Score = 105 bits (263), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 104/375 (27%), Positives = 168/375 (44%), Gaps = 72/375 (19%)
Query: 25 VEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCKL 84
+ P+ PY Q + + L A A++E PTG GK+++LL S L +QQ K
Sbjct: 196 LALPFTPYPVQQEMIRMIADVLHSASPHVVPVAVVEVPTGCGKTMALLSSVLRYQQELKR 255
Query: 85 KNQL---ANISHSKPDTEAVTDP-----------------LAN-GGGFIPESQPST---- 119
K+ A + +P E P LA GG I ++ T
Sbjct: 256 KSPKELDAYLRQRRPSGERRKAPPKGRRGQRGPRQRGAARLAPVAGGDIDANEGDTDDEC 315
Query: 120 -----IPPS------TNGQTAQVA----MNNKNVKKKMTP---TIFYASRTHSQISQVIS 161
+PPS N Q A ++ ++++ P T++Y +RTH+Q+ Q +
Sbjct: 316 TDGWSVPPSFFKHFRVNSQRKIRAELDVAGSQELRRRFLPPPCTVYYVTRTHAQLRQAVR 375
Query: 162 EYKK---TAYRVPMAVLASRKHYCTNKYVRDKE----------NIDEECKLLLGDRNLGC 208
E ++ + M +L SR+ YC + V + N+ E C L+ +LG
Sbjct: 376 ELRRLHGATSAIRMNILGSRERYCIHPKVMASKANHTLPVQGNNLGEVCDKLV---SLGL 432
Query: 209 PQFKNVH------KVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLV 262
+ + + + G Q+G ++ D+EDLV G C YYAAR + A +
Sbjct: 433 CEMVDKYDELSCSAITGPVGHQRG---QIWDMEDLVLEGTSRHMCPYYAARDLVFYADVN 489
Query: 263 FCPYSYIINPVIR--GAMEVDIK-GAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMEL 319
FC Y Y+++P+IR ME +K A+++ DEAHN+ + +DA S++ VL + EL
Sbjct: 490 FCTYPYLLDPLIRHETKMEAALKNNAVVVFDEAHNVAAVCQDALSLECPRAVLALILSEL 549
Query: 320 EQVCSVN-PMIYQPL 333
E + S P+ QPL
Sbjct: 550 EPLVSNQVPLARQPL 564
Score = 94.0 bits (232), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 86/374 (22%), Positives = 155/374 (41%), Gaps = 64/374 (17%)
Query: 457 TLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQ--FGTCLEAPHVI---D 511
T+ L CL+ ++ F + + ++L SGTLSP + +LGV+ LE HV+
Sbjct: 796 TIDLRCLDGSLAFSYLLKTVHRVVLASGTLSPFPQLARDLGVEASLWRTLEGLHVVPPTQ 855
Query: 512 VDLQVLTSV----------ISTGPDNYPLNASYKTADGYKLMEKLCNRWRETGQWSRLNA 561
L LT++ +T P PL ++ + ++ + + Q R ++
Sbjct: 856 YSLTALTALPVSSSSTHDGTTTQPLLLPLRCTHASLSNPVFLKTVARAVVQLTQTLRESS 915
Query: 562 KK------PLFVEPKGGSQEDFEIVL----KHYYNSISQGSKCAVVRKKRVKREGNNDLN 611
P + ++ E++L + + S + + + R L
Sbjct: 916 GGGVLLFVPNYAVLTALAKLTREVLLVAQREQQHQSPHAAAPTQLFLEPRKAEALTEVLC 975
Query: 612 TIESQENANKKGASFL-AVCRGKI---------------VVGIPFPNINDIQVSLKKKYN 655
++ A + G + L +V RGK+ +G+P + +V ++ Y
Sbjct: 976 QFQNCTQAPRCGTALLFSVYRGKVSEGLDFTDDMARLVLCLGLPLQPLKSWKVIAQRAY- 1034
Query: 656 DTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKW 715
SG++WY A RA+NQA+GRC+RH DYGA++LLDER+ + + +SKW
Sbjct: 1035 ----------SGSDWYTTDAVRAVNQALGRCLRHMKDYGAVVLLDERYAQPEYQERLSKW 1084
Query: 716 LRKSIKQYDSFDASLEGLKSFFRDVKGWVGKKMFNGLENSDNDV-------DHVSSMDQC 768
R +++ S GL++ F W ++ F L S + + D D
Sbjct: 1085 CRATLQTESSLPQLCAGLRTSFMQ---W--RRAFGALAMSTSPLPTPSAAADRAVPWDDI 1139
Query: 769 KEVTKQNTQELNKS 782
V Q+ L ++
Sbjct: 1140 GGVAHQDAASLART 1153
>gi|300123499|emb|CBK24771.2| unnamed protein product [Blastocystis hominis]
Length = 261
Score = 105 bits (263), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 120/285 (42%), Gaps = 80/285 (28%)
Query: 489 MNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTADGYKLMEKLCN 548
MN SE + LE HVI+ D Q++ + N PL++SY+ L E++ +
Sbjct: 1 MNPLISEFQIPISNVLENMHVIN-DSQLMVVTVDRSIHNIPLSSSYQARQNSILKEEIID 59
Query: 549 R----------------------------WRETGQWSRLNAKKPLFVEPKGGSQEDFEIV 580
W + G+ L + KP++ E + F V
Sbjct: 60 TILFFLPSIPGNVIIFFPSYSYLNECYASWEQQGKLDSLRSVKPVYREESKMTNAQFGEV 119
Query: 581 LKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGK------- 633
+K Q+ ++GA LAVCRGK
Sbjct: 120 VKFL-------------------------------QKAVYERGAVLLAVCRGKASEGIDF 148
Query: 634 --------IVVGIPFPNINDIQVSLKKKYNDTYRSSKNL-----LSGNEWYCNQAFRALN 680
I+ GIP+P + D +V ++++Y D + + SGN+WY A+RA+N
Sbjct: 149 SDAMCRCVIITGIPYPTLTDRKVIMRRQYLDERNAQQRAFNERPFSGNDWYTISAYRAVN 208
Query: 681 QAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDS 725
Q+IGR IRH+ D+G I+L+DERF + ++S+W++ ++ S
Sbjct: 209 QSIGRVIRHKNDFGVILLMDERFGSRDSERYLSRWMQPFYRRMQS 253
>gi|55925522|ref|NP_001007320.1| probable ATP-dependent RNA helicase DDX11 [Danio rerio]
gi|55250690|gb|AAH85645.1| Zgc:92172 [Danio rerio]
Length = 890
Score = 105 bits (263), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 133/331 (40%), Gaps = 76/331 (22%)
Query: 457 TLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLE------APHVI 510
+L LN AV F + + ++I+ GT+ P+ F +L G E HVI
Sbjct: 577 SLKFLLLNAAVHFAQILQECRAVIIAGGTMQPVADFKEQLLFSAGVTEERILEFSCGHVI 636
Query: 511 DVDLQVLTSVISTGPDNYPLNASYKTADGYKLMEK-------LCN--------------- 548
+ +L V+ GP L +++T D ++ME+ LCN
Sbjct: 637 PPE-NILPIVLCAGPSGQQLEFTFQTRDSPQMMEETGRVLSNLCNIVPGGVVCFFPSYEY 695
Query: 549 ------RWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRV 602
W TG RL +KK +F EPK SQ E VL Y SKC +
Sbjct: 696 EKRILGHWESTGILQRLQSKKKIFQEPKKASQ--VEQVLSEY-------SKC-------I 739
Query: 603 KREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQ 647
+R N + GA +V GK ++VG+P+PNI +
Sbjct: 740 QRCSNI---------GGGQTGALLFSVVGGKMSEGINFSDDLGRCIVMVGMPYPNIKSPE 790
Query: 648 VSLKKKYNDTYRSSKNLLS-GNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEE 706
+ K Y D + S G + +A+NQ+IGR IRHR DY I+L D R+
Sbjct: 791 LQEKMAYLDKHMPHVAGKSPGKALVESLCMKAVNQSIGRAIRHRGDYACIVLCDHRYART 850
Query: 707 RNRAHISKWLRKSIKQYDSFDASLEGLKSFF 737
+ +W+R S + +F + + FF
Sbjct: 851 GTLQKLPEWIRSSTHTHATFGPAFASARRFF 881
Score = 82.0 bits (201), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 92/205 (44%), Gaps = 34/205 (16%)
Query: 146 IFYASRTHSQISQVISEYKKTAY--RVPMAVLASRKHYCTNKYVRDKENIDEECKLLLGD 203
I+Y SRTHSQ++Q + E +K+ Y V + L SR++ C N V N+ ++ +
Sbjct: 208 IYYCSRTHSQLAQFVHEVQKSPYGDAVRLVNLGSRQNLCINPEVVRLGNVQ-----MMNE 262
Query: 204 RNLGCPQFKNVHKVRGHPS---------LQKGGCH----------------EVHDIEDLV 238
R L KN H+ R S L K C +V D+E L+
Sbjct: 263 RCLEMQ--KNKHEKRQKASDSESKRSRGLAKATCVFSRFENLMAMKDEVLVKVRDVEQLI 320
Query: 239 NVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDI 298
G+ C YY+ R AQ+V PY +++ R A + +K I+I+DEAHN+ D
Sbjct: 321 QHGRETHTCPYYSTRMSIPAAQVVVLPYQSLLHASTRKASGIKLKDQIVIIDEAHNLMDT 380
Query: 299 ARDAGSVDIDEDVLLKLQMELEQVC 323
S +I L + +L Q C
Sbjct: 381 ISAIHSAEISGGQLCRAHSQLSQYC 405
Score = 57.4 bits (137), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 48/85 (56%), Gaps = 7/85 (8%)
Query: 27 FPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNC--KL 84
FP+QPY Q FM + + LD+ + + ESPTGTGKSLSL+C L W ++ +
Sbjct: 10 FPFQPYPIQESFMEALYTALDQRKV-----GIFESPTGTGKSLSLICGALTWLRDYEEQR 64
Query: 85 KNQLANISHSKPDTEAVTDPLANGG 109
K + A + + D++ V + +N G
Sbjct: 65 KQEAARLLEGQKDSDVVKEKNSNSG 89
>gi|443709796|gb|ELU04301.1| hypothetical protein CAPTEDRAFT_175213 [Capitella teleta]
Length = 875
Score = 105 bits (263), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 143/321 (44%), Gaps = 51/321 (15%)
Query: 457 TLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTC------LEAPHVI 510
++ LNP+V F ++ + ++IL GT+ P+N F +L G HVI
Sbjct: 566 SVRFILLNPSVHFSEIIREARAVILAGGTMQPVNDFKEQLFKAAGVPEQRIREFSCGHVI 625
Query: 511 DVDLQVLTSVISTGPDNYPLNASYKTADGYKLMEKL-------CN--------------- 548
Q+L ++ G L+ +Y+ D ++M +L CN
Sbjct: 626 PPK-QLLPIALARGSSGTELDFTYQKRDQPQMMSELGRVIYNVCNLTPGGVVCFFPSYEL 684
Query: 549 ------RWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSK--CAVVRKK 600
W + G +++ AKK +F EP+ +Q D +L+ Y I + + ++
Sbjct: 685 ERTVHAYWEKEGFLNKMAAKKKIFREPRKSNQVDR--ILREYSACIERHASGGTSITGAV 742
Query: 601 RVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKY-NDTY- 658
G I +N +CR ++VG+P+PNI ++ K +Y N T
Sbjct: 743 MFCVVGGKMSEGINFSDN----------LCRCVVMVGLPYPNIRSPELKEKMEYLNATMP 792
Query: 659 RSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRK 718
R+ G Y N +A+NQ+IGR IRH+ DY AI+LLD+R+ + ++ + W+ K
Sbjct: 793 RTPDGQTPGQLHYENLCMKAVNQSIGRAIRHQADYAAILLLDQRYLKANVQSKLPSWICK 852
Query: 719 SIKQYDSFDASLEGLKSFFRD 739
++ F ++ L+ FF D
Sbjct: 853 HLQNIQRFGPTVSALRKFFAD 873
Score = 86.3 bits (212), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 97/196 (49%), Gaps = 31/196 (15%)
Query: 137 NVKKKMTPTIFYASRTHSQISQVISEYKKTAY--RVPMAVLASRKHYCTNKYVR------ 188
NV+ + IFY SRTHSQ++Q + E +K+ + + L SR++ C N+ V+
Sbjct: 190 NVEDEQITKIFYCSRTHSQLTQFVREVQKSPFGESTHLISLGSRQNTCINEAVKRLSSLS 249
Query: 189 --------------DKENIDEECKLLLGDRNLGCPQFK--NVHKVRGHPSLQKGGCHEVH 232
+K N D E K + GCP +K ++H ++ + +V
Sbjct: 250 LINDRCLEMQRSKSEKRNKDGE-KSSKMTKQCGCPFYKQDSLHLLKDRALI------DVQ 302
Query: 233 DIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEA 292
DIE LV G+ + C YY++R AQ+V PY +++ R + V +KG ++I+DEA
Sbjct: 303 DIEQLVTQGKQTKACPYYSSRLAVPAAQIVVLPYQMLLHKSTRESCGVKLKGQVVIIDEA 362
Query: 293 HNIEDIARDAGSVDID 308
HN+ + + S ++
Sbjct: 363 HNLLETISNIHSTSVN 378
Score = 57.8 bits (138), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 39/64 (60%), Gaps = 7/64 (10%)
Query: 27 FPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNC--KL 84
FP++PYG Q FM + S ++ Q + ESPTGTGKSLSL+C L W Q+ K
Sbjct: 9 FPFEPYGIQEAFMHNLYSAIEGGQ-----MGIFESPTGTGKSLSLICGALTWLQDYEEKQ 63
Query: 85 KNQL 88
+N+L
Sbjct: 64 RNEL 67
>gi|408390405|gb|EKJ69805.1| hypothetical protein FPSE_10005 [Fusarium pseudograminearum CS3096]
Length = 863
Score = 105 bits (262), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 95/355 (26%), Positives = 143/355 (40%), Gaps = 101/355 (28%)
Query: 458 LSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFG----TCLEAPHVIDVD 513
LS L+P F +A + ++IL GT+SP + + L T L HVI +
Sbjct: 536 LSYLLLSPTHAFSSIASSARAVILAGGTMSPFDDYKDHLFPSLEPDKVTTLSCGHVIPPE 595
Query: 514 LQVLTSVISTGPDNYPLNASYK---------------------TADG-------YKLMEK 545
+ ++ S P P S++ DG Y +++
Sbjct: 596 NLCVWTLASPRPGAPPFEFSFQKRGDTEMITQLGLAILNLCSLVPDGVVIFFPSYGYLDE 655
Query: 546 LCNRWRET------GQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRK 599
+ W+++ W RL +K LF E +G S E+ VL+ Y ++I QG
Sbjct: 656 VVAVWQKSQGASTQSVWDRLGTRKALFKETRGASSEE---VLQEYSDAI-QG-------- 703
Query: 600 KRVKREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNIN 644
E +N KGA L+V GK +V+G+P+PNI
Sbjct: 704 -----------------EKSNGKGALLLSVVGGKMSEGINFSDRLGRCVLVIGLPYPNIA 746
Query: 645 DIQVSLKKKYNDTYRS--------------SKNLLSGNEWYCNQAFRALNQAIGRCIRHR 690
K +Y +T SK + ++Y N RA+NQ+IGR IRHR
Sbjct: 747 SPDWKAKIEYIETTTRNNLVAQGTTQEQAVSKAKQTARDFYENACMRAVNQSIGRAIRHR 806
Query: 691 FDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGL----KSFFRDVK 741
DY AI+L+D R+ +R R + W+R + DS + L GL FFR K
Sbjct: 807 GDYAAIVLVDRRYGTDRIRGKLPGWIRGGLVG-DSHEKGLGGLMGAVGGFFRGKK 860
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 89/183 (48%), Gaps = 21/183 (11%)
Query: 146 IFYASRTHSQISQVISEYKKTAY-----------------RVPMAVLASRKHYCTNKYVR 188
I+Y SRTHSQ+SQ I+E ++ ++ V + L+SR+ C N V
Sbjct: 208 IYYTSRTHSQLSQFITELRRPSFPPSLPTSLSKQEETKTEAVKLLPLSSRQRLCINPAVS 267
Query: 189 ---DKENIDEECKLLLGDRN-LGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVV 244
+ I++ C L ++ CP + + + DIEDL +G+ +
Sbjct: 268 RLGSVQAINDRCSELQQPKSGQKCPFVPKEDLLSQTHQFRDSALATLPDIEDLHQLGKSL 327
Query: 245 RGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGS 304
C YYA+R+ A+++ PY ++ R A+ V ++G+I+I+DEAHNI D + +
Sbjct: 328 AVCPYYASRTALPGAEIITLPYPLLLQKSARDALGVKLEGSIVIVDEAHNIMDAVANVHA 387
Query: 305 VDI 307
+I
Sbjct: 388 AEI 390
Score = 56.2 bits (134), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 19 HVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
+G + PY PY Q FM V L+ +G +LESPTGTGKSLSL+C++L W
Sbjct: 12 EMGKLDFHHPYTPYDVQEQFMKAVYDVLESG--NGQV-GILESPTGTGKSLSLICASLTW 68
Query: 79 QQNCKLKNQLANISHS 94
+N K A+I S
Sbjct: 69 LRNHKSNQFEASIQES 84
>gi|345792101|ref|XP_543872.3| PREDICTED: DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 [Canis
lupus familiaris]
Length = 905
Score = 105 bits (262), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 140/334 (41%), Gaps = 77/334 (23%)
Query: 457 TLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSEL----GVQFGTCLE--APHVI 510
+L LNPAV F V + ++++ GT+ P++ F +L GV+ +E HVI
Sbjct: 593 SLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPVSDFREQLLACAGVEAERVVEFSCGHVI 652
Query: 511 DVDLQVLTSVISTGPDNYPLNASYKTADGYKLMEK----LCN------------------ 548
D +L +I +GP + L +Y+ + ++M++ LCN
Sbjct: 653 PPD-NILPLIICSGPSSQQLEFTYQKRELPQMMDETGRILCNLCTVVPGGVVCFFPSYEY 711
Query: 549 ------RWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRV 602
W ++G +RL +K +F EPK +Q E VL Y I KC
Sbjct: 712 QRQVYAHWDKSGLLARLAVRKKIFQEPKRANQ--VEQVLMEYSRCI----KCC------- 758
Query: 603 KREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQ 647
Q GA L+V GK ++VG+P+PNI +
Sbjct: 759 ------------GQAGGTVTGALLLSVVGGKMSEGINFSDDLGRCVVMVGMPYPNIKSPE 806
Query: 648 VSLKKKYNDTY--RSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQE 705
+ K Y D R G N +A+NQ+IGR IRH+ D+ +I+LLD+R+
Sbjct: 807 LQEKMAYLDQTLPRVPGQPPPGKALVENLCMKAVNQSIGRAIRHQKDFASIVLLDQRYAR 866
Query: 706 ERNRAHISKWLRKSIKQYDSFDASLEGLKSFFRD 739
+ W+R ++ +F + ++ F R+
Sbjct: 867 PPILEKLPAWIRDRVEVRATFGPAFATMRKFHRE 900
Score = 82.8 bits (203), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 95/198 (47%), Gaps = 26/198 (13%)
Query: 146 IFYASRTHSQISQVISEYKKTAY--RVPMAVLASRKHYCTNKYVRDKENI---------- 193
I+Y SRTHSQ++Q + E +++ + + L SR++ C N+ V+ ++
Sbjct: 229 IYYCSRTHSQLAQFVHEVQRSPFGKDTRLVSLGSRQNLCVNEDVKTLGSVQLINDRCMEM 288
Query: 194 ----------DEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQV 243
+E+ K + CP F N +++ L+ V DIE LV +G+
Sbjct: 289 QRSKHENRAEEEKPKRRRQEHQAACP-FYNYEQLQ---LLRDQVLVGVKDIEQLVALGKE 344
Query: 244 VRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAG 303
R C YY +R AQLV PY +++ R A + ++G ++++DEAHN+ D
Sbjct: 345 ARACPYYGSRFAIPAAQLVVLPYQMLLHAATRQAAGIRLQGQVVVIDEAHNLIDTITGIH 404
Query: 304 SVDIDEDVLLKLQMELEQ 321
SV++ L + +L Q
Sbjct: 405 SVEVSGSQLCQAHSQLLQ 422
Score = 53.1 bits (126), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 46/89 (51%), Gaps = 9/89 (10%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+G I FP+ PY Q FM + L+ A + G + ESPTGTGKSLS++C L+W
Sbjct: 8 IGDIHFPFPFTPYSIQKDFMAELYRVLE-AGKIG----IFESPTGTGKSLSVICGALSWL 62
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANG 108
++ + K K A T PL +G
Sbjct: 63 RDFEQKKHQEEARLLK----AGTTPLNDG 87
>gi|195049542|ref|XP_001992741.1| GH24926 [Drosophila grimshawi]
gi|193893582|gb|EDV92448.1| GH24926 [Drosophila grimshawi]
Length = 843
Score = 105 bits (262), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 137/317 (43%), Gaps = 54/317 (17%)
Query: 457 TLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEA------PHVI 510
TL LNPA F D+ + ++I+ GT+ P + +++L F C E HV+
Sbjct: 537 TLKYLLLNPAEHFADIISEARALIIAGGTMQPTHELTAQL---FAHCPERVVERFYSHVV 593
Query: 511 DVDLQVLTSVISTGPDNYPLNASYKTADGYKL-------MEKLCN--------------- 548
D VL V+ GP L SY + + ++ LC+
Sbjct: 594 PPD-AVLPFVLPAGPTGTKLCFSYTQRTSFAMLNELRMVLQNLCSVLPAGVVCFLPSYDY 652
Query: 549 ------RWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRV 602
++G R+ +K +F E GG E +L+ Y ++ISQ + A
Sbjct: 653 LETVYAHLEQSGALQRIGQRKRIFREKAGGG--GVEQLLQQYADAISQSAGPA------- 703
Query: 603 KREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYNDTYRSSK 662
G L+ + + + A L RG IVVG+P+PN ++ + ++ D +
Sbjct: 704 -GGGALLLSVVGGKLSEGLNFADDLG--RGVIVVGLPYPNRTAPELKERMRHLD---DTL 757
Query: 663 NLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIK- 721
+GNE+Y N +A+NQ IGR +RH DY + LLDER+ ER + + W+ + I
Sbjct: 758 GYAAGNEYYENLCMKAVNQCIGRSVRHIRDYACVYLLDERYASERIQKKLPAWIARHIHV 817
Query: 722 QYDSFDASLEGLKSFFR 738
D F A FF+
Sbjct: 818 ASDGFGAVQARTARFFK 834
Score = 86.7 bits (213), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 98/184 (53%), Gaps = 13/184 (7%)
Query: 146 IFYASRTHSQISQVISEYKKTAY--RVPMAVLASRKHYCTNKYVRDKEN---IDEECKLL 200
IFY SRTH+Q++Q+++E +KT + V L SR C + VR N I+E C L
Sbjct: 187 IFYCSRTHAQLAQIVAELRKTPHGKSVRCISLGSRHQLCIHAQVRRISNVALINERC-LD 245
Query: 201 LGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQ 260
+ CP K ++V+ ++ E+ DIE+L G GC YYA RS AQ
Sbjct: 246 MARLKPSCPH-KAPNQVQ---RMRDASLSELMDIEELATQGAACGGCPYYATRSALAQAQ 301
Query: 261 LVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELE 320
LV PY ++ R + +D++GA++I+DEAHN+ D S ++ D +LQ+ +
Sbjct: 302 LVLLPYPLLLQRSTRQQLGIDLRGAVIIVDEAHNLLDTIAQLHSSELSRD---QLQLARQ 358
Query: 321 QVCS 324
Q+ +
Sbjct: 359 QLAA 362
Score = 45.8 bits (107), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
Query: 27 FPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
FPY PY Q M ++ L+ Q + ESPTGTGKSL+L C L W
Sbjct: 18 FPYTPYTIQEQLMQQLFLVLESKQ-----IGIFESPTGTGKSLTLTCGALTW 64
>gi|343472331|emb|CCD15481.1| unnamed protein product, partial [Trypanosoma congolense IL3000]
Length = 407
Score = 105 bits (262), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 104/366 (28%), Positives = 168/366 (45%), Gaps = 74/366 (20%)
Query: 27 FPYQPYGSQLVFMCRVISTLDRAQRDGHCH-ALLESPTGTGKSLSLLCSTLAWQ------ 79
P++PY Q M + ++L H A +E PTG GK+L+LL S L +Q
Sbjct: 10 MPFEPYAVQKDMMQTITTSL--LSSSPHLPIAAVEIPTGCGKTLALLSSVLRYQAELEKL 67
Query: 80 ------QNCKLKNQLANISHSKPDTEAV------------TDPLANGG------GFIPES 115
Q+ + + A I+ T+ T P A G G + +
Sbjct: 68 TPHELEQHFRKRRCGARIAEIAASTDTAVQQTSWCQCDGRTPPTAELGLLRTDEGAVDDD 127
Query: 116 QPSTI---------PPSTNGQTAQVAMNNKN---VKKKMTP---TIFYASRTHSQISQVI 160
+ PPS G+ +V + K + ++ P TIFY +RTHSQ+ Q +
Sbjct: 128 SLWRVSSLFFKQFRPPS--GKRLRVESDGKGASELSRQHRPPPCTIFYVTRTHSQLRQSV 185
Query: 161 SEYKKT--AYRVPMAVLASRKHYCTNKYVR----------DKENIDEECKLLLGDRNLGC 208
E +K R+ M +L SRK YC N++ + N+ E C L+ +LG
Sbjct: 186 GELRKLRGLERLKMNILGSRKQYCINQHAMRAYASKALPAEGNNLGEVCDKLV---SLGQ 242
Query: 209 PQFKNVHKVRGHPSLQK----GGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFC 264
+ + + V G +L + +V DIEDLV G ++ C YYAAR + A + F
Sbjct: 243 CEAVHGYGVLGSRALTRPLNQSRSDKVWDIEDLVTEGVGMKCCPYYAARDLVFFAHINFA 302
Query: 265 PYSYIINPVIRG--AMEVDIKG-AILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQ 321
Y Y+++P+IR ME +K +I+I DEAHN+ + ++A S+++ D L + E++
Sbjct: 303 TYQYLLDPLIRHECKMEPALKNHSIIIFDEAHNVSSVCQEALSMEMPLDALQLILSEIQP 362
Query: 322 VCSVNP 327
+ +NP
Sbjct: 363 L--INP 366
>gi|440472803|gb|ELQ41640.1| DNA repair helicase RAD3 [Magnaporthe oryzae Y34]
gi|440484308|gb|ELQ64395.1| DNA repair helicase RAD3 [Magnaporthe oryzae P131]
Length = 805
Score = 105 bits (262), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 158/708 (22%), Positives = 287/708 (40%), Gaps = 148/708 (20%)
Query: 146 IFYASRTHSQISQVISEYKK-TAYRVPMAV---------LASRKHYCTNKYVRDKEN--- 192
+ Y SRT S+I + ++E K YR L SRK+ C + V+ +++
Sbjct: 59 LIYCSRTMSEIEKALAELKNLMKYRAGELGKEEDFRGLGLTSRKNLCLHPSVKREKSGAI 118
Query: 193 IDEECKLLL----------GDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQ 242
+D C+ L G+ C N+ + H + G V +E L+ G+
Sbjct: 119 VDARCRGLTAGFVKEKKEKGEDVELCVYHDNLDLLEPHNLIPNG----VWTLEGLLRYGE 174
Query: 243 VVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARD 301
+ C Y+ +R M ++ Y Y+++P I + ++ + +I++ DEAHNI+++ +
Sbjct: 175 EHKQCPYFTSRRMMQYCNVIIYSYHYLLDPKIAERVSKELSRDSIIVFDEAHNIDNVCIE 234
Query: 302 AGSVDIDEDVLLKLQ---MELEQVCSVNPMIYQPLIEMTQDLVGWIE-RRKATLAKREFQ 357
+ S DI ED L K M LE+ +N M ++ + +E R+A A++E
Sbjct: 235 SLSTDITEDSLRKASRGAMNLEK--RINEMRETDQNQLEDEYRKLVEGLREADEARQEDA 292
Query: 358 HFFSCWTGDKALRELQEANISR-----------------------QCF-----PILLECA 389
+ D L+E NI R Q + +L++
Sbjct: 293 FMSNPVLPDDLLKEAVPGNIRRAEHFVAFLKRFIEYLKASNSLSSQIYVYFQLTLLIQTR 352
Query: 390 TKAIKEATDTE-SELPHLSGMSVI-----------------TLEGL-------FSSLTYF 424
K ++ ++T S L HL + I TLE + F
Sbjct: 353 MKVLEVISETPPSFLAHLKEYTFIEKKPLRFCAERLTSLVRTLELTNIEDFQPLQEVATF 412
Query: 425 FSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSG 484
+ ++ + L L+ Y S+ P L CL+ A+ K V E ++I+TSG
Sbjct: 413 ATLVATYDKGFLLLLEPYESEKSQIPNP----VLHFTCLDAAIAIKPVFERFKTVIITSG 468
Query: 485 TLSPMNSFSSELGVQFGTCLEAPHVIDVDLQ-VLTSVISTGPDNYPLNASYKTADGYKLM 543
TLSP+ + LG F ++ + + + + L +++ G D +++S+ + ++
Sbjct: 469 TLSPLEMYPKMLG--FDAVVQESYAMTLARRSFLPMIVTKGSDQASISSSFAVRNDPAVV 526
Query: 544 EKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYN-----SISQGSKC--AV 596
R GQ AK + P G + Y+ S+ QG K +
Sbjct: 527 -------RNYGQLLTEFAK----ITPDG-----MVVFFPSYFYMESIISMWQGMKILDEI 570
Query: 597 VRKKRVKREGNNDLNT---IESQENA--NKKGASFLAVCRGKI---------------VV 636
+ K + E + T +E+ A N GA L V RGK+ +
Sbjct: 571 WKYKLILVETPDAQETAVALETYRTACCNGTGAIMLCVARGKVSEGIDFDHQYGRTVLCI 630
Query: 637 GIPFPNINDIQVSLKKKY-NDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGA 695
G+PF + + + ++ +TYR + N++ A R Q +GR +R + DYG
Sbjct: 631 GVPFQYTESLILKARLEFLRETYR-----IRENDFLSFDAMRHAAQCLGRVLRGKDDYGI 685
Query: 696 IILLDERFQEERNRAHISKWLRKSIKQYD---SFDASLEGLKSFFRDV 740
++L D RF + R + KW+ +++ + D S D ++ + F + +
Sbjct: 686 MVLADRRFP--KKRPQLPKWINQALAESDVNMSTDMAVSAARKFLKSM 731
>gi|29792240|gb|AAH50522.1| DDX11 protein [Homo sapiens]
Length = 970
Score = 105 bits (261), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 149/647 (23%), Positives = 251/647 (38%), Gaps = 183/647 (28%)
Query: 146 IFYASRTHSQISQVISEYKKTAYR--VPMAVLASRKHYCTNKYVRD---KENIDEECKLL 200
I+Y SRTHSQ++Q + E KK+ + V + L SR++ C N+ V+ + I++ C +
Sbjct: 229 IYYCSRTHSQLAQFVHEVKKSPFGKDVRLVSLGSRQNLCVNEDVKSLGSVQLINDRCVDM 288
Query: 201 LGDRNL-------------------GCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVG 241
R+ CP F N H+ G L+ EV D+E L+ +G
Sbjct: 289 QRSRHEKKKGAEEEKPKRRRQEKQAACP-FYN-HEQMG--LLRDEALAEVKDMEQLLALG 344
Query: 242 QVVRGCSYYAARSMADDAQLVFCPYSYIINPVIR-------------------------G 276
+ R C YY +R AQLV PY +++ R G
Sbjct: 345 KEARACPYYGSRLAIPAAQLVVLPYQMLLHAATRQAAGIRLQDQVVIIDEAHNLIDTITG 404
Query: 277 AMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMEL----------------- 319
V++ G+ L + ++ + R + + LK + L
Sbjct: 405 MHSVEVSGSQLCQAHSQLLQYVERYGKRLKAKNLMYLKQILYLLEKFVAVLGGNIKQNPN 464
Query: 320 --------EQVCSVNPMIYQPLIE---------------MTQDLVGWIERRKATLAKRE- 355
++ ++N ++Q I+ +++ L G+ ER A + RE
Sbjct: 465 TQSLSQTGTELKTINDFLFQSQIDNINLFKVQRYCEKSMISRKLFGFTERYGAVFSSREQ 524
Query: 356 -----FQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMS 410
FQ F L+ LQ T+A+ D ES+ L S
Sbjct: 525 PKLAGFQQF---------LQSLQPRT-------------TEALAAPAD-ESQASTLRPAS 561
Query: 411 -VITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVF 469
++ ++G ++LT +++G + Q +L + TL LNPAV F
Sbjct: 562 PLMHIQGFLAALT-MANQDGRVILSRQGSLSQ--------------STLKFLLLNPAVHF 606
Query: 470 KDVAELSLSIILTSGTLSPMNSFSSEL----GVQFGTCLE--APHVIDVDLQVLTSVIST 523
V + ++++ GT+ P++ F +L GV+ +E HVI D +L VI +
Sbjct: 607 AQVVKECRAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHVIPPD-NILPLVICS 665
Query: 524 GPDNYPLNASYKTADGYKLMEK----LCN------------------------RWRETGQ 555
G N PL +++ + ++M++ LCN W + G
Sbjct: 666 GISNQPLEFTFQKRELPQMMDEVGRILCNLCGVVPGGVVCFFPSYEYLRQVHAHWEKGGL 725
Query: 556 WSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIES 615
RL A+K +F EPK Q E VL Y I C ++R + G L+ +
Sbjct: 726 LGRLAARKKIFQEPKSAHQ--VEQVLLAYSRCI---QACG---QERGQVTGALLLSVVGG 777
Query: 616 QENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYNDTYRSSK 662
+ + + L C ++VG+PFPNI ++ K Y D S +
Sbjct: 778 KMSEGINFSDNLGRC--VVMVGMPFPNIRSAELQEKMAYLDQTLSPR 822
Score = 54.3 bits (129), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 38/68 (55%), Gaps = 5/68 (7%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
VG I FP+ PY Q FM + L+ + + ESPTGTGKSLSL+C L+W
Sbjct: 8 VGAIHFPFPFTPYSIQEDFMAELYRVLEAGK-----IGIFESPTGTGKSLSLICGALSWL 62
Query: 80 QNCKLKNQ 87
++ + K +
Sbjct: 63 RDFEQKKR 70
>gi|357617927|gb|EHJ71072.1| putative DEAD/H [Danaus plexippus]
Length = 756
Score = 105 bits (261), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 137/313 (43%), Gaps = 51/313 (16%)
Query: 458 LSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELG-----VQFGTCLEAPHVIDV 512
L LNPA F DV S+IL GT+ P++ F L + ++ HV+
Sbjct: 451 LKYLLLNPAEHFADVVSQCRSVILAGGTMEPISEFQELLASDKTQLDRVNVVKCGHVVPA 510
Query: 513 DLQVLTSVISTGPDNYPLNASYKTADGYKLMEK-------LCN----------------- 548
D VL +S GP LN SY+ ++L+ + LCN
Sbjct: 511 D-NVLGICLSKGPSKLNLNFSYENRSSFELLNEIGRILRNLCNVVPDGVVCFLPSYSFEQ 569
Query: 549 ----RWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKR 604
+ TG ++ KK +F EPK S+ E VL+ Y A V+ K
Sbjct: 570 TLYEHLKSTGVLESVSKKKIIFREPKSASE--VEQVLQKY---------SAAVKSKVGDI 618
Query: 605 EGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYNDTYRSSKNL 664
G L+ + + + + L C +VVG+P+PNI +++ K KY +
Sbjct: 619 NGALMLSVVGGKLSEGLNFSDELGRCV--LVVGMPYPNIKSLELQEKMKYLNKSTPG--- 673
Query: 665 LSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYD 724
SG+ +Y N +A+NQ IGR +RH DY +IL+DER+ + + + +++KS+
Sbjct: 674 -SGSIYYENLCMKAVNQCIGRAVRHANDYACVILVDERYSRSQTISALPSFVQKSLISNC 732
Query: 725 SFDASLEGLKSFF 737
F ++ + FF
Sbjct: 733 VFGQAMGSIAKFF 745
Score = 86.3 bits (212), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 94/186 (50%), Gaps = 27/186 (14%)
Query: 146 IFYASRTHSQISQVISEYKKTAYR--VPMAVLASRKHYCTNKYVRDKENI---------- 193
I+ +SRTHSQ+SQ I E K+T + + LASR+HYC N V +N+
Sbjct: 76 IYISSRTHSQLSQFIGEIKRTIFNKGTKVVTLASRQHYCINSEVNRLKNVSLINERCLEM 135
Query: 194 ----------DEECKLLLGDRNLGCPQ--FKNVHKVRGHPSLQKGGCHEVHDIEDLVNVG 241
DEE K++ + C + N + ++ L++ EV D+E++V G
Sbjct: 136 QKSKTKSTAKDEEGKVVKKSKTKACSACPYYNQNNIK---KLKEKLLVEVMDMEEIVKSG 192
Query: 242 QVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARD 301
+ ++ C YYA+R +DA++ ++ I++ R + + ++ ILI+DEAH + +
Sbjct: 193 KQMKACPYYASRMALEDAEVALISHAGIVSHGARTGVSIKLQNNILIMDEAHGLSAALEN 252
Query: 302 AGSVDI 307
A S +
Sbjct: 253 AHSAPV 258
>gi|401425034|ref|XP_003877002.1| helicase-like protein [Leishmania mexicana MHOM/GT/2001/U1103]
gi|322493246|emb|CBZ28531.1| helicase-like protein [Leishmania mexicana MHOM/GT/2001/U1103]
Length = 1117
Score = 104 bits (260), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 102/382 (26%), Positives = 170/382 (44%), Gaps = 79/382 (20%)
Query: 25 VEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCKL 84
+ P+ PY Q + + L A A+ E PTG GK+++LL S L +QQ K
Sbjct: 32 LALPFTPYPVQQEMIRMITDVLHSANPHVVPVAVAEVPTGCGKTMALLSSVLRYQQELKR 91
Query: 85 KN---------QLANISHSK-PDTEAV-TDPLANGGGFIPESQPS--------------- 118
K+ Q + H + P E P GG P+ + +
Sbjct: 92 KSPKELDAYLRQRRPLWHQRRPSGEKRKVPPKRRGGQRGPQQRGAERLEPVADGDIDADE 151
Query: 119 -----------TIPPS------TNGQTAQVA----MNNKNVKKKMTP---TIFYASRTHS 154
++PPS N Q A + ++ ++++ P T++Y +RTH+
Sbjct: 152 GHTGNECADGWSVPPSFFKHFRANSQRKIRAELDVVGSQELRRRFLPPPCTVYYVTRTHA 211
Query: 155 QISQVISEYKK---TAYRVPMAVLASRKHYCTNKYVRDKE----------NIDEECKLLL 201
Q+ Q + E ++ + M +L SR+ YC + V + N+ E C L+
Sbjct: 212 QLRQAVRELRRLHGATSAIRMNILGSRERYCIHPKVMASKANHTLPVQGNNLGEVCDKLV 271
Query: 202 GDRNLGCPQFKNVH------KVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSM 255
++G + + + + G Q+G ++ D+EDLV G C YYAAR +
Sbjct: 272 ---SMGLCEMVDKYDELSCSAIAGPIGHQRG---QIWDMEDLVLEGTSRHMCPYYAARDL 325
Query: 256 ADDAQLVFCPYSYIINPVIR--GAMEVDIK-GAILILDEAHNIEDIARDAGSVDIDEDVL 312
A A + FC Y Y+++P+IR ME +K A+++ DEAHN+ + +DA S++ DVL
Sbjct: 326 AFYADVNFCTYPYLLDPLIRHETRMEAALKNNAVVVFDEAHNVAAVCQDALSLECPRDVL 385
Query: 313 LKLQMELEQVCSVN-PMIYQPL 333
+ ELE + S P+ QP+
Sbjct: 386 ALILSELEPLVSNQVPLARQPV 407
Score = 92.8 bits (229), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 131/327 (40%), Gaps = 84/327 (25%)
Query: 457 TLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQ--FGTCLEAPHVI---D 511
T+ L CL+ ++ F + + ++L SGTLSP + +LGV+ +E HV+
Sbjct: 639 TIDLRCLDGSLAFSHLLKTVHRVVLASGTLSPFPQLARDLGVEAFLWRTVEGLHVVPPTQ 698
Query: 512 VDLQVLTSV----------ISTGPDNYPLNASYKT------------------------- 536
L LT++ +T P PL +Y +
Sbjct: 699 YSLTALTALPVSSSSSHNGTTTQPPLLPLRCTYASLSNPVFLKTVARAVVQLTQTLRESS 758
Query: 537 -------ADGYKLMEKLCNRWRET-------GQWSRLNAKKP--LFVEPKGGSQEDFEIV 580
Y ++ L RE Q L+A P LFVEP+ E V
Sbjct: 759 GGGVLLFVPNYAVLTALAKLTREALLVAQREQQHQSLHAVAPTQLFVEPR--KAEALTGV 816
Query: 581 LKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLA-VCRGKIVVGIP 639
L + N +Q +C V R +G F + R + +G+P
Sbjct: 817 LCQFQN-CTQAPRCGTALLFSVYR-------------GKVSEGLDFTDDMARLVLCLGVP 862
Query: 640 FPNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILL 699
+ +V ++ Y SG++WY A RA+NQA+GRC+RH DYGA++LL
Sbjct: 863 LQPLKSWKVIAQRAY-----------SGSDWYTTDAVRAVNQALGRCLRHVKDYGAVVLL 911
Query: 700 DERFQEERNRAHISKWLRKSIKQYDSF 726
DER+ + + +SKW R +++ S
Sbjct: 912 DERYAQPEYQERLSKWCRATLQTESSL 938
>gi|241623164|ref|XP_002407529.1| CHL1 protein, putative [Ixodes scapularis]
gi|215501004|gb|EEC10498.1| CHL1 protein, putative [Ixodes scapularis]
Length = 429
Score = 104 bits (260), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 136/317 (42%), Gaps = 54/317 (17%)
Query: 458 LSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLE------APHVID 511
L LNP+ FKDV + ++IL GT+ P + F +L + G E HV+
Sbjct: 124 LKYVLLNPSNYFKDVVSQARAVILAGGTMEPTSEFVDQLLIPAGVPPERILHFACGHVVP 183
Query: 512 VDLQVLTSVISTGPDNYPLNASYKTADGYKLMEKLCN----------------------- 548
+ +S GP L +Y+ + + +L N
Sbjct: 184 KS-NLCALALSQGPSGKTLEFTYQNRADVETIRELGNLLINVARVVPGGVVCFFPSYEYE 242
Query: 549 -----RWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVK 603
+W+ +G +L A+KP+F EP S+ + + L S G+ V ++
Sbjct: 243 KVVSEKWKSSGLLEKLAARKPIFREPVKSSELEKMLALYGQCAKSSTGALLFAVVGGKMS 302
Query: 604 REGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKY-NDTY-RSS 661
EG N + + R ++VG+PFPN ++ K + N TY +SS
Sbjct: 303 -EGINFSDDMG----------------RCVVMVGLPFPNARSPEMKSKIDFLNATYPQSS 345
Query: 662 KNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIK 721
+G +Y N +A+NQ+IGR IRH+ DY I+L+D+R+Q + W+R S+
Sbjct: 346 DGRSAGKVYYDNVCMKAVNQSIGRAIRHKDDYATILLVDQRYQRPSISKALPSWIRDSLA 405
Query: 722 QYDSFDASLEGLKSFFR 738
+ F + ++ FFR
Sbjct: 406 AHSKFGTAFAAIQQFFR 422
>gi|392575737|gb|EIW68869.1| hypothetical protein TREMEDRAFT_30972 [Tremella mesenterica DSM
1558]
Length = 796
Score = 104 bits (260), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 157/737 (21%), Positives = 283/737 (38%), Gaps = 173/737 (23%)
Query: 122 PSTNGQTAQVA------MNNKNVKKKMTPTIFYASRTHSQISQVISEYKK-TAYRVPMAV 174
PS G+T + M VK+K+ Y SRT +I + ++E K+ YRV M
Sbjct: 43 PSGTGKTVSLLSLIVSYMQFYPVKRKL----IYCSRTVPEIEKALAELKRLMEYRVEMGA 98
Query: 175 ---------LASRKHYCTNKYVRDKEN---IDEECKLLLGDRNLGCPQFKNVHKVRGHP- 221
L SR++ C + V ++ +D C+ L C K R P
Sbjct: 99 KDEDFRGLGLTSRRNLCLHPEVSKEKKGKIVDSRCRDLTS--AFAC------EKGRAEPG 150
Query: 222 SLQKGGCHE--------------VHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYS 267
S+ HE V+ ++D+ GQ C Y+ R M ++ +
Sbjct: 151 SVPLCSYHEELNNYETGNLIPPGVYTLDDVKKWGQEKGTCPYFTIRRMMPFVDIIIYSFH 210
Query: 268 YIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVL-------------- 312
Y+++P + + ++ K +I++ DEAHNI+++ ++ S+D+ +L
Sbjct: 211 YLLDPKVAENVSAEMSKESIVVFDEAHNIDNVCIESLSIDLTRPMLDSAARSVNKISDKI 270
Query: 313 --------LKLQMELEQVCS---------------VNPMIYQPLIEMTQDLVGWIERRKA 349
KLQ E E++ + +P++ L+E + + G I + +
Sbjct: 271 EEMKRTDATKLQDEYEKLVAGLQEANERREDEDMLASPVLSTDLLE--EAMPGNIRKAEH 328
Query: 350 TLAKREFQHFFSCWTGDKALRELQEANISRQCFPILLECAT----KAIKEATDTESELPH 405
+A F F + + +R L + Q F L+ T + +K A + + L
Sbjct: 329 FIA---FLKRFIEYMKTR-MRVLHVVAETPQSFLAHLKEITFIERRPLKFAAERLTNLVR 384
Query: 406 LSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNP 465
++ I + F + ++ + L L+ Y + P + T CL+P
Sbjct: 385 TLELTNIDEHYALQKVAGFGTLVATYEKGFLLILEPYETEHATVPNPIFHMT----CLDP 440
Query: 466 AVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGP 525
++ V E S+++TSGT+SP++ + L Q P + + VI+ G
Sbjct: 441 SLAIAPVFERFSSVVITSGTISPLDMYPKILQFQPTLIQSYPMTLTRN-AFFPMVITRGS 499
Query: 526 DNYPLNASYKT---------------------ADG-------YKLMEKLCNRWRETGQWS 557
D P+++ ++ DG Y ME + + W + G S
Sbjct: 500 DQVPISSRFEVRNDPAVVRNFGSILIDMSKTVPDGIVAFFPSYLYMESIVSAWYDMGILS 559
Query: 558 RLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQE 617
+ K LFVE + + LK+Y RE N
Sbjct: 560 EVWKHKLLFVETPDAMETS--VALKNY-------------------REACN--------- 589
Query: 618 NANKKGASFLAVCRGKIVVGIPFPNIND---IQVSLKKKYNDT--------YRSSKNLLS 666
N +GA L+V RGK+ GI F + I + +Y ++ + + +
Sbjct: 590 --NGRGAVMLSVARGKVSEGIDFDHNYGRAVIMFGIPYQYTESRILKARLEFLRDNHRIR 647
Query: 667 GNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYD-- 724
N++ A R Q +GR +R + D+G ++ D+RF + RA + W+ + I
Sbjct: 648 ENDYLTFDAMRHAAQCVGRVLRGKTDWGLMVFADKRFARQDKRAKLPLWINQYITGAHSN 707
Query: 725 -SFDASLEGLKSFFRDV 740
S D ++ K F R +
Sbjct: 708 LSTDMAIVLAKKFIRQI 724
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 47/83 (56%), Gaps = 6/83 (7%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+ + + V FPY + Y Q +MC + TLD GHC +LE P+GTGK++SLL +
Sbjct: 3 FMIDDLPVLFPYDRIYPEQYSYMCDLKKTLDAG---GHC--VLEMPSGTGKTVSLLSLIV 57
Query: 77 AWQQNCKLKNQLANISHSKPDTE 99
++ Q +K +L S + P+ E
Sbjct: 58 SYMQFYPVKRKLIYCSRTVPEIE 80
>gi|350399366|ref|XP_003485501.1| PREDICTED: probable ATP-dependent RNA helicase DDX11-like [Bombus
impatiens]
Length = 858
Score = 104 bits (259), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 144/315 (45%), Gaps = 55/315 (17%)
Query: 458 LSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLE------APHVID 511
+ LNPA F D+ + ++IL GT++PMN F+ +L + G E HVI
Sbjct: 552 IKFLLLNPAAHFHDIIRDARAVILAGGTMAPMNEFTDQLFIAAGASSERIVTYSCDHVIP 611
Query: 512 VDLQVLTSVISTGPDNYPLNASYKTADGYKLMEKL-------CN---------------- 548
+ ++ S+ + GP +++ + KL+++L CN
Sbjct: 612 EE-NIVCSITTHGPTGIEFEFNFQNRENTKLLDELGRALLNLCNIIPAGIIVFLPSYNFE 670
Query: 549 -----RWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVK 603
+G +L+ KK + EPK SQ +LK Y V+ +
Sbjct: 671 ELIYKHLENSGIVKKLSLKKHILREPKSASQ--VHEILKEY---------SLHVKNPKNS 719
Query: 604 REGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKY-NDTYRSSK 662
+ G+ + + + + + L C IVVG+P+PNI +++ K KY N+ +S
Sbjct: 720 QNGSLLFSVVGGKLSEGLNFSDDLGRCV--IVVGMPYPNIQSLELQEKMKYLNENIKSD- 776
Query: 663 NLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQ 722
+G +Y N +A+NQ IGR IRH DY +ILLD+R+ + + +W+++++
Sbjct: 777 ---AGQNFYENSCMKAVNQCIGRAIRHINDYSTVILLDKRYSYKIKA--LPQWIQRTLII 831
Query: 723 YDSFDASLEGLKSFF 737
+ SF +++ + FF
Sbjct: 832 HKSFGSTIGAISKFF 846
Score = 102 bits (254), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 102/190 (53%), Gaps = 14/190 (7%)
Query: 146 IFYASRTHSQISQVISEYKKTAY--RVPMAVLASRKHYCTNKYVRDKE--NIDEECKLLL 201
IF+ SRTHSQ+SQ I E +K+ Y V + L SR++YC NK V+ + N+ EC L L
Sbjct: 193 IFFCSRTHSQLSQFIGELRKSPYSKNVSVITLTSRQNYCINKNVKKLKHLNLINECCLQL 252
Query: 202 GDRNLGCPQFKNVHKVRGHPS----------LQKGGCHEVHDIEDLVNVGQVVRGCSYYA 251
+ K++ + + S L + ++ DIE++V G+ ++ C+YYA
Sbjct: 253 QRKKTTAKDEKDLKRKKMTSSCPFVPGNQDLLIRESLMQIRDIEEIVQKGENLKTCAYYA 312
Query: 252 ARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDV 311
+R QL+ PY+ I++ R + +++KG ILI+DEAHN+ + + SV I
Sbjct: 313 SRKAVSYGQLILVPYNTILHKNTRISSGINLKGNILIIDEAHNLLEAIENMHSVIITGRN 372
Query: 312 LLKLQMELEQ 321
LL +L Q
Sbjct: 373 LLHCYSQLSQ 382
>gi|302503364|ref|XP_003013642.1| hypothetical protein ARB_00089 [Arthroderma benhamiae CBS 112371]
gi|291177207|gb|EFE33002.1| hypothetical protein ARB_00089 [Arthroderma benhamiae CBS 112371]
Length = 749
Score = 104 bits (259), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 164/749 (21%), Positives = 300/749 (40%), Gaps = 174/749 (23%)
Query: 146 IFYASRTHSQISQVISEYKK-TAYRV-PMAV--------LASRKHYCTNKYVRDKEN--- 192
+ Y SRT S+I + +SE + YR + V L SRK+ C + V+ +++
Sbjct: 28 LIYCSRTMSEIEKALSELRALMKYRSQKLGVVEDFRALGLTSRKNLCLHPSVKREKSGAV 87
Query: 193 IDEECKLLL----------GDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQ 242
+D C+ L G+ C +N+ + + G V ++ L+ G+
Sbjct: 88 VDARCRSLTAGFIKEKKEKGEDVELCIYHENLDLLEPSNLVPPG----VFTLDGLLKYGE 143
Query: 243 VVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARD 301
+ C Y++AR M ++ Y Y+++P I + ++ + +I++ DEAHNI+++ +
Sbjct: 144 QHKQCPYFSARRMMPYCNVIIYSYHYLLDPKIAERVSKELSRDSIIVFDEAHNIDNVCIE 203
Query: 302 AGSVDIDEDVLLK-------LQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKR 354
+ S+D+ ED L K L+ +++ + S + L Q LV + +
Sbjct: 204 SLSIDLTEDSLRKASRGANNLERKIDDMKSSDA---DKLQNEYQKLVEGLREADEAREEE 260
Query: 355 EFQHFFSCWTGDKALRELQEANISR-QCFPILLECATKAIK---EATDTESELP-----H 405
Q + D L+E NI R + F L+ + +K + T T SE P H
Sbjct: 261 --QLMANPVLPDDLLKESVPGNIRRAEHFVAFLKRFIEYLKTRMKVTHTISETPLSFLSH 318
Query: 406 LSGMSVI-----------------TLEGL-------FSSLTYFFSRNGSHVSDYQLALQK 441
L ++ I TLE + + F + ++ + L L+
Sbjct: 319 LKDLTFIERKPLRFCAERLTSLVRTLELVNIEDYQPLQEVATFATLAATYEKGFLLILEP 378
Query: 442 YIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFG 501
+ + P L CL+ A+ K V + S+I+TSGTLSP+ + LG F
Sbjct: 379 FESDTATVPNP----ILHFTCLDAAIAIKPVFDRFSSVIITSGTLSPLEMYPKMLG--FD 432
Query: 502 TCLEAPHVIDVDLQ-VLTSVISTGPDNYPLNASYK---------------------TADG 539
L+ + + + + L +++ G D +++S++ T DG
Sbjct: 433 AALQESYSMTLARRSFLPMIVTRGSDQAQISSSFQIRNDPGVVRNYGNMLLEFCRITPDG 492
Query: 540 -------YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGS 592
Y ME + + W+ G + K + VE SQE + L+ Y + G
Sbjct: 493 VVVFFPSYLYMESIISMWQGMGILDSVWNYKLILVETP-DSQES-SLALETYRTACCNG- 549
Query: 593 KCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKI---------------VVG 637
+GA L V RGK+ +G
Sbjct: 550 -----------------------------RGAVLLCVARGKVSEGIDFDHHYGRTVLCIG 580
Query: 638 IPFPNINDIQVSLKKKY-NDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAI 696
+PF + + ++ + YR + N++ A R Q +GR +R + DYG +
Sbjct: 581 VPFQYTESRILKARLEFLRENYR-----IRENDFLSFDALRHAAQCLGRVLRGKDDYGVM 635
Query: 697 ILLDERFQEERNRAHISKWLRKSIKQYD---SFDASLEGLKSFFRDVKGWVGKKMFNGLE 753
+L D RFQ++RN+ + KW+ +++ + + S D ++ KSF K M +
Sbjct: 636 VLADRRFQKKRNQ--LPKWISQAMLESETNLSTDMAVATAKSFL--------KSMAQPFK 685
Query: 754 NSDNDVDHVSSMDQCKEVTKQNTQELNKS 782
D + S++ K ++ QE+ K+
Sbjct: 686 AKDQEGISTWSLEDLKRHLEKQKQEIEKT 714
>gi|132566527|ref|NP_689651.1| probable ATP-dependent RNA helicase DDX11 isoform 3 [Homo sapiens]
gi|380420356|ref|NP_001244073.1| probable ATP-dependent RNA helicase DDX11 isoform 3 [Homo sapiens]
gi|74731686|sp|Q96FC9.1|DDX11_HUMAN RecName: Full=Probable ATP-dependent RNA helicase DDX11; AltName:
Full=CHL1-related protein 1; Short=hCHLR1; AltName:
Full=DEAD/H box protein 11; AltName: Full=Keratinocyte
growth factor-regulated gene 2 protein; Short=KRG-2
Length = 970
Score = 104 bits (259), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 149/647 (23%), Positives = 251/647 (38%), Gaps = 183/647 (28%)
Query: 146 IFYASRTHSQISQVISEYKKTAYR--VPMAVLASRKHYCTNKYVRD---KENIDEECKLL 200
I+Y SRTHSQ++Q + E KK+ + V + L SR++ C N+ V+ + I++ C +
Sbjct: 229 IYYCSRTHSQLAQFVHEVKKSPFGKDVRLVSLGSRQNLCVNEDVKSLGSVQLINDRCVDM 288
Query: 201 LGDRNL-------------------GCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVG 241
R+ CP F N H+ G L+ EV D+E L+ +G
Sbjct: 289 QRSRHEKKKGAEEEKPKRRRQEKQAACP-FYN-HEQMG--LLRDEALAEVKDMEQLLALG 344
Query: 242 QVVRGCSYYAARSMADDAQLVFCPYSYIINPVIR-------------------------G 276
+ R C YY +R AQLV PY +++ R G
Sbjct: 345 KEARACPYYGSRLAIPAAQLVVLPYQMLLHAATRQAAGIRLQDQVVIIDEAHNLIDTITG 404
Query: 277 AMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMEL----------------- 319
V++ G+ L + ++ + R + + LK + L
Sbjct: 405 MHSVEVSGSQLCQAHSQLLQYVERYGKRLKAKNLMYLKQILYLLEKFVAVLGGNIKQNPN 464
Query: 320 --------EQVCSVNPMIYQPLIE---------------MTQDLVGWIERRKATLAKRE- 355
++ ++N ++Q I+ +++ L G+ ER A + RE
Sbjct: 465 TQSLSQTGTELKTINDFLFQSQIDNINLFKVQRYCEKSMISRKLFGFTERYGAVFSSREQ 524
Query: 356 -----FQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMS 410
FQ F L+ LQ T+A+ D ES+ L S
Sbjct: 525 PKLAGFQQF---------LQSLQPRT-------------TEALAAPAD-ESQASTLRPAS 561
Query: 411 -VITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVF 469
++ ++G ++LT +++G + Q +L + TL LNPAV F
Sbjct: 562 PLMHIQGFLAALTTA-NQDGRVILSRQGSLSQ--------------STLKFLLLNPAVHF 606
Query: 470 KDVAELSLSIILTSGTLSPMNSFSSEL----GVQFGTCLE--APHVIDVDLQVLTSVIST 523
V + ++++ GT+ P++ F +L GV+ +E HVI D +L VI +
Sbjct: 607 AQVVKECRAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHVIPPD-NILPLVICS 665
Query: 524 GPDNYPLNASYKTADGYKLMEK----LCN------------------------RWRETGQ 555
G N PL +++ + ++M++ LCN W + G
Sbjct: 666 GISNQPLEFTFQKRELPQMMDEVGRILCNLCGVVPGGVVCFFPSYEYLRQVHAHWEKGGL 725
Query: 556 WSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIES 615
RL A+K +F EPK Q E VL Y I C ++R + G L+ +
Sbjct: 726 LGRLAARKKIFQEPKSAHQ--VEQVLLAYSRCI---QACG---QERGQVTGALLLSVVGG 777
Query: 616 QENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYNDTYRSSK 662
+ + + L C ++VG+PFPNI ++ K Y D S +
Sbjct: 778 KMSEGINFSDNLGRC--VVMVGMPFPNIRSAELQEKMAYLDQTLSPR 822
Score = 54.3 bits (129), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 38/68 (55%), Gaps = 5/68 (7%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
VG I FP+ PY Q FM + L+ + + ESPTGTGKSLSL+C L+W
Sbjct: 8 VGAIHFPFPFTPYSIQEDFMAELYRVLEAGK-----IGIFESPTGTGKSLSLICGALSWL 62
Query: 80 QNCKLKNQ 87
++ + K +
Sbjct: 63 RDFEQKKR 70
>gi|340055622|emb|CCC49943.1| TFIIH basal transcription factor, private [Trypanosoma vivax Y486]
Length = 889
Score = 103 bits (258), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 152/714 (21%), Positives = 275/714 (38%), Gaps = 153/714 (21%)
Query: 146 IFYASRTHSQISQVISEYKK---------TAYRVPMAV-LASRKHYCTNKYVRDKENIDE 195
+ Y +RT ++ + + E +K T R V L ++K+ C V ++ +DE
Sbjct: 156 VVYCTRTVEEVVKTLGELRKLLRLWESEGTLSRPLHGVCLTAKKNLCIEPSVVNRRGLDE 215
Query: 196 ---ECKLLLGDRNLG--CPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYY 250
C+ L+ C F + L G + ++DL G+ C YY
Sbjct: 216 VDAGCRSLIAPWQTSQRCSYFDTLDS--AEFELPPGA----YSVDDLKQFGETHHVCPYY 269
Query: 251 AARSMADDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDE 309
AR A +V + YI++P++ + + + I+++DE HN++D+ +A S+ I +
Sbjct: 270 LARKALKAADIVVHSFLYIVDPIVAEVTKEYLNENTIVVMDEGHNVDDVCIEAMSLIITK 329
Query: 310 DVLLKLQMELEQVCSVNPMI-----------YQPLIEMTQDLVGWIERRKATLAK----- 353
D ++ + L+Q+ I Y L+ AT A
Sbjct: 330 DDAVQAKESLKQLNRAVDYIKATNRQRLQDEYDRLVNGLAMAEMARAAEPATFAPVRTPS 389
Query: 354 --------------REFQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDT 399
R+ HF + ISR L TK +E +
Sbjct: 390 IPQDIAEEAVPGTLRQANHFLAFMQRLVDFTHRVVCRISRTYVADPLTFLTKVREECSVD 449
Query: 400 ESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDS-KNPGGNWT--- 455
L +L+ + L + TY F RN ++ + L + D + PG
Sbjct: 450 LRHLRYLTERLKALMNTLQITNTYGF-RNIVLIAQMYMTLATHYTDDRYERPGFVVVCEA 508
Query: 456 ----------HTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQ------ 499
+ L C++ ++ +DV S++LTSGTLSP++ + LG
Sbjct: 509 HDPTRPAVPDPVVRLVCVDASLALRDVFSRHRSVVLTSGTLSPLDIYPKILGFSPVISKS 568
Query: 500 FGTCLE----APHVI-------DVDLQVLTS------------VISTGPDNYPLNASYKT 536
F L AP V+ ++ + +TS ++S+ ++ +
Sbjct: 569 FQMTLSRKCIAPVVVTRSSESVNITAEEVTSCFVVRKDPVAQEIVSSAYEDLLRGLAKTV 628
Query: 537 ADG-------YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSIS 589
DG Y+ M ++ W ++G L K +FVE + S E+ + L +Y +
Sbjct: 629 PDGIVCFFTGYQYMSEVLLGWYKSGFLKELAQHKLIFVETQ--SVEETSLALANYKRACD 686
Query: 590 QGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPF--------- 640
G +GA F+A+ RGKI GI F
Sbjct: 687 IG------------------------------RGAVFMAIARGKIAEGIDFDRHYGRAVV 716
Query: 641 ----PNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAI 696
P + + L+++ + + + GNE+ A R +Q IGR +R++ DYG +
Sbjct: 717 MFGVPFLPPLDEPLRQRIH--WMEMCLGIPGNEYRNFDAMRQASQCIGRVLRNKTDYGMM 774
Query: 697 ILLDERFQEERNRAHISKWLRKSIKQYD--SFDASLEGLKSFFRDV-KGWVGKK 747
+L+D RF R + W+++ +K+ S DA++ + FF+++ + W K+
Sbjct: 775 LLVDRRFALNDKRKKLPIWIQQCLKENTNLSVDAAIAIARGFFKEMAQPWEHKR 828
>gi|60811280|gb|AAX36168.1| DEAD/H box polypeptide 11 [synthetic construct]
Length = 971
Score = 103 bits (258), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 149/647 (23%), Positives = 251/647 (38%), Gaps = 183/647 (28%)
Query: 146 IFYASRTHSQISQVISEYKKTAYR--VPMAVLASRKHYCTNKYVRD---KENIDEECKLL 200
I+Y SRTHSQ++Q + E KK+ + V + L SR++ C N+ V+ + I++ C +
Sbjct: 229 IYYCSRTHSQLAQFVHEVKKSPFGKDVRLVSLGSRQNLCVNEDVKSLGSVQLINDRCVDM 288
Query: 201 LGDRNL-------------------GCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVG 241
R+ CP F N H+ G L+ EV D+E L+ +G
Sbjct: 289 QRSRHEKKKGAEEEKPKRRRQEKQAACP-FYN-HEQMG--LLRDEALAEVKDMEQLLALG 344
Query: 242 QVVRGCSYYAARSMADDAQLVFCPYSYIINPVIR-------------------------G 276
+ R C YY +R AQLV PY +++ R G
Sbjct: 345 KEARACPYYGSRLAIPAAQLVVLPYQMLLHAATRQAAGIRLQDQVVIIDEAHNLIDTITG 404
Query: 277 AMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMEL----------------- 319
V++ G+ L + ++ + R + + LK + L
Sbjct: 405 MHSVEVSGSQLCQAHSQLLQYVERYGKRLKAKNLMYLKQILYLLEKFVAVLGGNIKQNPN 464
Query: 320 --------EQVCSVNPMIYQPLIE---------------MTQDLVGWIERRKATLAKRE- 355
++ ++N ++Q I+ +++ L G+ ER A + RE
Sbjct: 465 TQSLSQTGTELKTINDFLFQSQIDNINLFKVQRYCEKSMISRKLFGFTERYGAVFSSREQ 524
Query: 356 -----FQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMS 410
FQ F L+ LQ T+A+ D ES+ L S
Sbjct: 525 PKLAGFQQF---------LQSLQPRT-------------TEALAAPAD-ESQASTLRPAS 561
Query: 411 -VITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVF 469
++ ++G ++LT +++G + Q +L + TL LNPAV F
Sbjct: 562 PLMHIQGFLAALTTA-NQDGRVILSRQGSLSQ--------------STLKFLLLNPAVHF 606
Query: 470 KDVAELSLSIILTSGTLSPMNSFSSEL----GVQFGTCLE--APHVIDVDLQVLTSVIST 523
V + ++++ GT+ P++ F +L GV+ +E HVI D +L VI +
Sbjct: 607 AQVVKECRAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHVIPPD-NILPLVICS 665
Query: 524 GPDNYPLNASYKTADGYKLMEK----LCN------------------------RWRETGQ 555
G N PL +++ + ++M++ LCN W + G
Sbjct: 666 GISNQPLEFTFQKRELPQMMDEVGRILCNLCGVVPGGVVCFFPSYEYLRQVHAHWEKGGL 725
Query: 556 WSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIES 615
RL A+K +F EPK Q E VL Y I C ++R + G L+ +
Sbjct: 726 LGRLAARKKIFQEPKSAHQ--VEQVLLAYSRCI---QACG---QERGQVTGALLLSVVGG 777
Query: 616 QENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYNDTYRSSK 662
+ + + L C ++VG+PFPNI ++ K Y D S +
Sbjct: 778 KMSEGINFSDNLGRC--VVMVGMPFPNIRSAELQEKMAYLDQTLSPR 822
Score = 54.3 bits (129), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 38/68 (55%), Gaps = 5/68 (7%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
VG I FP+ PY Q FM + L+ + + ESPTGTGKSLSL+C L+W
Sbjct: 8 VGAIHFPFPFTPYSIQEDFMAELYRVLEAGK-----IGIFESPTGTGKSLSLICGALSWL 62
Query: 80 QNCKLKNQ 87
++ + K +
Sbjct: 63 RDFEQKKR 70
>gi|71018229|ref|XP_759345.1| hypothetical protein UM03198.1 [Ustilago maydis 521]
gi|46099195|gb|EAK84428.1| hypothetical protein UM03198.1 [Ustilago maydis 521]
Length = 1496
Score = 103 bits (258), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 98/187 (52%), Gaps = 23/187 (12%)
Query: 144 PTIFYASRTHSQISQVISEYKKTAY---------RVPMAV--LASRKHYCTNKYV----R 188
P + YASRTHSQ+SQ ++E KKT++ +P+ L SRK C N+ V R
Sbjct: 243 PRVIYASRTHSQLSQFVAELKKTSFGQVDIIHAETLPIRTIPLGSRKQMCINEDVQRIGR 302
Query: 189 DK--ENIDEECKLLLGDRN-----LGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVG 241
+K E ++E C L+ + P F + R + EV DIEDLV +G
Sbjct: 303 NKGSEAMNERCIELIKGKTGKTKCSSLPPFDQTGRSR-ILEFRDAAMAEVGDIEDLVQLG 361
Query: 242 QVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARD 301
+ C Y+AARS A A+L+ PY+ ++ R A+ + ++G I+++DEAHN+ D
Sbjct: 362 KQTNTCPYFAARSSAKQAELITLPYNLLLQKDARNALGISLEGCIVLVDEAHNLIDTILS 421
Query: 302 AGSVDID 308
SV ID
Sbjct: 422 THSVTID 428
Score = 92.8 bits (229), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 131/304 (43%), Gaps = 79/304 (25%)
Query: 463 LNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFG-----TCLEAPHVIDVDLQVL 517
LNP+ VF+ + + + S+IL GT+ PM+ F +L + F H+I ++
Sbjct: 618 LNPSHVFRSLVDEARSVILAGGTMEPMSDFRQQL-LPFVPPDRLVTFSCGHIIPAS-NLM 675
Query: 518 TSVISTGPDNYPLNASYKTAD----------------------------GYKLMEKLCNR 549
SV+S P P + + D Y ++KL R
Sbjct: 676 VSVLSASPKGLPFEFKFDSRDNVELIDELGRTLVNVCNIVPAGLVVFVPSYAFLDKLMAR 735
Query: 550 WRET---GQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREG 606
W++ G RL +KK +F+EPK + + + VL Y A +R K VK
Sbjct: 736 WKDAASGGLLQRLGSKKKIFIEPK--TTMEVDKVLGEY---------TAAIRAKDVKTGV 784
Query: 607 NNDLNTIESQENAN-KKGASFLA-VCRGKIVVGIPFPNINDIQVSLKKKYN--------- 655
++ + + A +G +F + RG ++VG+PF N++ +++ + KY
Sbjct: 785 SSGGAIMFAVVGAKLSEGINFSDNLARGVVMVGMPFANMHSPELAERMKYVRELAIKHES 844
Query: 656 -----------------DTYRSSKNL--LSGNEWYCNQAFRALNQAIGRCIRHRFDYGAI 696
Y S+ L L G+E Y N +A+NQ+IGR +RH+ D+ A+
Sbjct: 845 TACVTASQKPSDPQRVLTKYMSNTLLPPLQGHELYINLCMKAVNQSIGRAVRHQNDFAAL 904
Query: 697 ILLD 700
ILLD
Sbjct: 905 ILLD 908
Score = 53.5 bits (127), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 38/62 (61%), Gaps = 7/62 (11%)
Query: 24 QVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW-QQN 81
Q FPY + Y QL M +V ST++ DG L ESPTGTGKSLSL+C+ W +QN
Sbjct: 24 QFHFPYAEAYSIQLDLMRKVFSTIE----DGKV-GLFESPTGTGKSLSLICAAFTWLRQN 78
Query: 82 CK 83
+
Sbjct: 79 AQ 80
>gi|302836153|ref|XP_002949637.1| hypothetical protein VOLCADRAFT_59582 [Volvox carteri f.
nagariensis]
gi|300264996|gb|EFJ49189.1| hypothetical protein VOLCADRAFT_59582 [Volvox carteri f.
nagariensis]
Length = 780
Score = 103 bits (257), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 163/774 (21%), Positives = 298/774 (38%), Gaps = 210/774 (27%)
Query: 122 PSTNGQTAQVA--MNNKNVKKKMTPTIFYASRTHSQISQVISEYKKTA-YRVP------- 171
P+ G+T + + + + K + Y +RT ++ +V++E + YR
Sbjct: 43 PTGTGKTITLLSLITSYQLAHKEVGKLIYCTRTVPEMEKVLAELAELIDYRAKYLGRGPG 102
Query: 172 ----MAV-LASRKHYCTNKYVRD---KENIDEECKLL----------------------- 200
+A+ L+SRK+ C + V + +E++D C+ L
Sbjct: 103 SNEILALGLSSRKNLCIHPRVAEEGSRESVDAGCRRLTASWVRERAAERGARGGEGGAEE 162
Query: 201 ------LGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARS 254
+ D L C F+ H+ G +L G + + D+ D G+ C Y+ AR
Sbjct: 163 GGSGGSVADIEL-CDFFEG-HERAGVEALLPPGVYTLSDLRDF---GRKRGWCPYFLARH 217
Query: 255 MADDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVL- 312
M A +V Y Y+I+P + + ++ K +++ DEAHNI+++ +A SV++ + L
Sbjct: 218 MMAFANVVVYNYQYMIDPKVSQMVSRELEKECVVVFDEAHNIDNVCIEALSVNLRKQTLE 277
Query: 313 ---------------------LKLQMELEQVCS---------------VNPMIYQPLIEM 336
+LQ E ++ + NP + + +++
Sbjct: 278 AAGRNLGKLSNSIRRAREADAARLQGEYNRLVAGLVAQGALRGGEDWLANPALPEDVVQE 337
Query: 337 T--------QDLVGWIERRKATLAKREFQHFFSCWTGDKALRELQE-ANISRQCFPILLE 387
T + +G++ R A L ++ + T L+ELQE + + +
Sbjct: 338 TVPGNIRRAEHFMGFLNRFLAFLREKMASPVVTSQTPQVFLQELQERVQVDAKTLKFCYD 397
Query: 388 CATKAIK--EATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKR 445
+ +K E T+T+ P I L F++L G++ + + ++ Y +R
Sbjct: 398 RLSSLLKTLEITNTDEFTP-------IQLVADFATLV------GTYAKGFAIIMEPYDER 444
Query: 446 DSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLE 505
+ P L L CL+ ++ K V S+++TSGTLSP++ + L
Sbjct: 445 LPQVP----DPVLQLSCLDASLAMKPVFSKFQSVVITSGTLSPIDLYPRILNFN------ 494
Query: 506 APHVIDVDLQVLTS------VISTGPDNYPLNASYK---------------------TAD 538
P I LT V++ G D P++ ++ D
Sbjct: 495 -PVAIQSFQMTLTRDCLCPVVVTRGADQMPMSTKFEMRGDPGVMRNYGRLLVELSAVVPD 553
Query: 539 G-------YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQG 591
G Y+ M+++ ++W + G + K +F+E +Q+ E L
Sbjct: 554 GIVAFFVSYRYMDQIISKWHDMGILQEIMQHKLIFIE----TQDVVETTL---------- 599
Query: 592 SKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFP-NINDIQVSL 650
A+ +R G +GA FL+V RGK+ GI F + V
Sbjct: 600 ---ALDNFRRACDSG---------------RGAVFLSVARGKVAEGIDFDRHYGRAVVMF 641
Query: 651 KKKYNDT----------YRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLD 700
Y T Y + N++ A R Q +GR IR + DYG +I D
Sbjct: 642 GVPYQYTLSRILRARLEYLRETFQIKENDYLAFDAVRQAAQCVGRVIRSKADYGMMIFAD 701
Query: 701 ERFQEERNRAHISKWLRKSIKQYD---SFDASLEGLKSFFRDV-----KGWVGK 746
+R+Q R + +W+ + +K+ S D + + F R + +G VGK
Sbjct: 702 KRYQRHDKRDKLPQWITRHLKEAHMNLSTDMMVHVAREFLRAMAQPYDRGAVGK 755
Score = 49.7 bits (117), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 48/90 (53%), Gaps = 6/90 (6%)
Query: 18 YHVGGIQVEFPYQ-PYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+++ G+ V FPY+ Y Q +M + LD GHC LLE PTGTGK+++LL
Sbjct: 3 FNLEGLTVYFPYEYIYPEQYRYMLELKRALDA---RGHC--LLEMPTGTGKTITLLSLIT 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLA 106
++Q K +L + + P+ E V LA
Sbjct: 58 SYQLAHKEVGKLIYCTRTVPEMEKVLAELA 87
>gi|301756631|ref|XP_002914172.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like
protein-like [Ailuropoda melanoleuca]
Length = 908
Score = 103 bits (257), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 113/465 (24%), Positives = 188/465 (40%), Gaps = 121/465 (26%)
Query: 336 MTQDLVGWIERRKATLAK-RE------FQHFFSCWTGDKALRELQEANISRQCFPILLEC 388
+++ L G+ ER LA RE FQHF L+ LQ A P+
Sbjct: 504 ISRKLFGFTERYGTVLAASREQPRLAGFQHF---------LQSLQPAVTKTPVTPV---- 550
Query: 389 ATKAIKEATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSK 448
+ E+ +P L+ ++ +E ++LT +++G + Q +L +
Sbjct: 551 --------EEGEAGVPRLAS-PLMHIESFLAALTTA-NQDGRVILSRQGSLSQ------- 593
Query: 449 NPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSEL----GVQFGTCL 504
+L LNPAV F V + ++++ GT+ P++ F +L GV+ +
Sbjct: 594 -------SSLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPVSDFREQLLACAGVEAERVV 646
Query: 505 E--APHVIDVDLQVLTSVISTGPDNYPLNASYKTADGYKLMEK----LCN---------- 548
E HVI + +L VI +GP + L +Y+ + ++M++ LCN
Sbjct: 647 EFSCGHVIPPE-NILPLVICSGPSSQQLEFTYQKRELPQMMDETGRILCNLCTVVPGGVV 705
Query: 549 --------------RWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKC 594
W ++G +RL +K +F EPK +Q E VL Y I KC
Sbjct: 706 CFFPSYEYQRQVYAHWDKSGLLARLAVRKKIFQEPKRANQ--VEQVLMEYSRCI----KC 759
Query: 595 AVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIP 639
Q GA L+V GK ++VG+P
Sbjct: 760 C-------------------GQAGGTVTGALLLSVVGGKMSEGINFSDNLGRCVVMVGMP 800
Query: 640 FPNINDIQVSLKKKYND--TYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAII 697
+PNI ++ K Y D R G N +A+NQ+IGR IRH+ D+ +I+
Sbjct: 801 YPNIKSPELQEKMAYLDQTLPRGPGQPPPGKALVENLCMKAVNQSIGRAIRHQKDFASIV 860
Query: 698 LLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFRDVKG 742
LLD+R+ + W+R ++ +F + ++ F R+ G
Sbjct: 861 LLDQRYARPSILGKLPAWIRDRVEVKATFGLAFAAMRKFHREKSG 905
Score = 80.9 bits (198), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 96/202 (47%), Gaps = 32/202 (15%)
Query: 146 IFYASRTHSQISQVISEYKKTAY--RVPMAVLASRKHYCTNKYVR---DKENIDEECKLL 200
I+Y SRTHSQ++Q + E +++ + + L SR++ C N+ V+ + I++ C +
Sbjct: 229 IYYCSRTHSQLAQFVHEVQRSPFGKDTRLVSLGSRQNLCINEDVKTLSSAQLINDRCMEM 288
Query: 201 L----GDRN---------------LGCP--QFKNVHKVRGHPSLQKGGCHEVHDIEDLVN 239
G +N CP ++ +H +R + V DIE LV
Sbjct: 289 QRSKHGKKNRAEEEKPKRRRQEHRAACPFYSYEQLHLLRDQVLVG------VKDIEQLVA 342
Query: 240 VGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIA 299
+G+ R C YY +R AQLV PY +++ R A + ++G ++++DEAHN+ D
Sbjct: 343 LGKEARACPYYGSRFAIPAAQLVVLPYQMLLHAATRQAAGIRLQGQVVLIDEAHNLIDTI 402
Query: 300 RDAGSVDIDEDVLLKLQMELEQ 321
S ++ L + +L Q
Sbjct: 403 TSIHSAEVSGAQLCQAHSQLLQ 424
Score = 57.8 bits (138), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 40/67 (59%), Gaps = 5/67 (7%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
VGGI FP+ PY Q FM + L+ A + G + ESPTGTGKSLSL+C L+W
Sbjct: 8 VGGIHFPFPFTPYSIQKDFMAELYQVLE-AGKIG----IFESPTGTGKSLSLICGALSWL 62
Query: 80 QNCKLKN 86
++ + K
Sbjct: 63 RDFEQKK 69
>gi|348506178|ref|XP_003440637.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8-like [Oreochromis niloticus]
Length = 897
Score = 103 bits (257), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 92/372 (24%), Positives = 158/372 (42%), Gaps = 63/372 (16%)
Query: 406 LSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNP 465
LS ++ +EG F +LT + +D ++ + K G ++ LNP
Sbjct: 549 LSASPMMQVEGFFMALT-------NSNTDGRVVVHK--------QGSLSESSVKFLLLNP 593
Query: 466 AVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLE------APHVIDVDLQVLTS 519
AV F V + ++I+ GT+ P++ F EL G E HVI + +L
Sbjct: 594 AVHFAQVLKECRAVIIAGGTMQPVSDFKQELLFSAGVVEERVTEFSCGHVIPPE-NILPL 652
Query: 520 VISTGPDNYPLNASYKTADGYKLMEK-------LCN---------------------RWR 551
V+ +GP L +++ D ++M++ +CN W
Sbjct: 653 VLCSGPSGQELEFTFQNRDTPRMMDETGRILSNICNVVPGGVVCFFPSYDYSRRIISHWE 712
Query: 552 ETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSK-CAVVRKKRVKREGNNDL 610
+G +RL KK +F EPK +Q E VL + I + S C+ + G
Sbjct: 713 TSGTLTRLANKKKIFQEPKKANQ--VEQVLNEFSRCIQRCSADCSGL-------TGALLF 763
Query: 611 NTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYNDTYR-SSKNLLSGNE 669
+ + + + + L C ++VG+P+PNI ++ K Y D + S+ G
Sbjct: 764 SVVGGKMSEGINFSDDLGRC--VVMVGMPYPNIKSPELQEKMSYLDRHLPHSQGRSPGQA 821
Query: 670 WYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDAS 729
N +A+NQ+IGR IRHR DY +I+L D R+ + + W++ + +F +
Sbjct: 822 LIENLCMKAVNQSIGRAIRHRGDYSSIVLCDRRYSRPATLSKLPTWIKDRTTTHMTFGPA 881
Query: 730 LEGLKSFFRDVK 741
L+ FF + K
Sbjct: 882 FAALRKFFLEKK 893
Score = 91.3 bits (225), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 89/172 (51%), Gaps = 20/172 (11%)
Query: 146 IFYASRTHSQISQVISEYKKTAYR--VPMAVLASRKHYCTNKYVR---DKENIDEECKLL 200
I+Y SRTHSQ++Q + E +K+ + + + L SR++ C N+ VR + I++ C +
Sbjct: 210 IYYCSRTHSQLAQFVHEVQKSPFSKDISVVTLGSRQNLCINEEVRRLGSIQRINDRCMEM 269
Query: 201 L----GDRN----LGCPQFKN-------VHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVR 245
G+R+ LG + + +K ++ VHDIE L+ +G+
Sbjct: 270 QKNKHGERHFVEELGVKRKRGPAKSVCPYNKASALQQMRDVVLGAVHDIEQLLKLGRETH 329
Query: 246 GCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIED 297
C YYA R AQLV PY +++ R A V +KG +LI+DEAHN+ D
Sbjct: 330 SCPYYATRLAIPPAQLVVLPYQMVLHEATRRAAGVQLKGQVLIIDEAHNLSD 381
Score = 57.8 bits (138), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 33/52 (63%), Gaps = 5/52 (9%)
Query: 27 FPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
FPYQPY Q FM + S LD+ + + ESPTGTGKSLSL+C L+W
Sbjct: 10 FPYQPYNIQEEFMQALYSALDKGKV-----GIFESPTGTGKSLSLICGALSW 56
>gi|389601910|ref|XP_001566207.2| helicase-like protein [Leishmania braziliensis MHOM/BR/75/M2904]
gi|322505237|emb|CAM39707.2| helicase-like protein [Leishmania braziliensis MHOM/BR/75/M2904]
Length = 1112
Score = 103 bits (257), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 106/399 (26%), Positives = 174/399 (43%), Gaps = 90/399 (22%)
Query: 1 MVSEANPNPNYRKPLNAYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLE 60
+S A P P+ PL V + P+ PY Q + L A A+ E
Sbjct: 15 FLSSAAPGPS--PPL----VASATLMLPFTPYPVQQEMSRMIADVLHSASPHVVPVAVAE 68
Query: 61 SPTGTGKSLSLLCSTLAWQQNCK----------LKNQLANISHSKP-DTEAVTDPLANGG 109
PTG GK+++LL S L +QQ K L+ + +P + P GG
Sbjct: 69 VPTGCGKTMALLSSVLQYQQELKHMSPKELDLYLRPRRPPWQQQRPPGKKRKASPKGRGG 128
Query: 110 GFIPE----SQPS----------------------TIPP-------STNGQTAQVAMN-- 134
P ++P+ ++PP + +G+ + ++
Sbjct: 129 QRGPRQRVVTRPAPVAESNLNADEGDHDDECADDWSVPPWFFKHFRNHSGRKIRAELDVA 188
Query: 135 -NKNVKKKMTP---TIFYASRTHSQISQVISEYKK---TAYRVPMAVLASRKHYCTNKYV 187
++ ++++ P T+FY +RTH+Q+ Q + E ++ + M +L SR+ YC + V
Sbjct: 189 GSQELRRRFLPPPCTVFYVTRTHAQLRQAVRELRRLHGATSAIRMNILGSRERYCIHPKV 248
Query: 188 RDKE----------NIDEECKLLLG-------DR--NLGCPQFKNVHKVRGHPSLQKGGC 228
+ + N+ E C L+ DR L C + GH Q+G
Sbjct: 249 MEAKANSTLPVEGNNLGEVCDKLVSMGLCEMVDRYDELSC---SAIAGPVGH---QRG-- 300
Query: 229 HEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIR--GAMEVDIK-GA 285
++ DIEDL+ G R C YYAAR + A + FC Y Y+++P+IR ME +K A
Sbjct: 301 -QIWDIEDLLLEGTSRRMCPYYAARDLVFFADVNFCTYPYLLDPLIRHETKMEAALKNNA 359
Query: 286 ILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQVCS 324
I++ DEAHN+ + +DA S++ + VL + ELE + S
Sbjct: 360 IVVFDEAHNVAAVCQDALSLECPQGVLALILSELEPLVS 398
Score = 95.9 bits (237), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 91/374 (24%), Positives = 159/374 (42%), Gaps = 64/374 (17%)
Query: 457 TLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQ--FGTCLEAPHVI---D 511
T+ L CL+ ++ F + + ++L SGTLSP + +LGV+ +E HV+
Sbjct: 634 TIDLRCLDGSLAFSHLLQTVHRVVLASGTLSPFTQLARDLGVEASLWRVVEGLHVVPSTQ 693
Query: 512 VDLQVLTS--VISTGPDN--------YPLNASYKTADGYKLMEKLCNRWRETGQWSRLNA 561
L LT+ V+ + N PL +Y + ++ + + + Q R ++
Sbjct: 694 YSLTALTALPVLPSSTHNEATTQSPLLPLRCTYASLSNPAFLKAVAHAVVQLVQTLRESS 753
Query: 562 KKP-LFVEPKGG-----SQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIES 615
LF P G ++ E++L Q S A + ++ L +
Sbjct: 754 GGGVLFFVPNYGVLTALAKLTREVLLVAQREEQHQSSCVAAPVQLFLEPRKAEALTEVLC 813
Query: 616 Q----ENANKKGAS-FLAVCRGKI---------------VVGIPFPNINDIQVSLKKKYN 655
Q A + G F +V RGK+ +G+P +N +V ++ Y
Sbjct: 814 QFQRCTQAPRCGTGLFFSVYRGKVSEGLDFTDNMARLVLCLGVPLLPLNSWRVIAQRAY- 872
Query: 656 DTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKW 715
SG EWY A RA+NQA+GRC+RH D+GA++LLDER+ + + +SKW
Sbjct: 873 ----------SGLEWYTTDAVRAVNQALGRCLRHVKDHGAVVLLDERYAQPEYQQRLSKW 922
Query: 716 LRKSIKQYDSFDASLEGLKSFFRDVKGWVGKKMFNGLENSDNDVDHVSS-------MDQC 768
R +++ S L+ F V +++F L S + H S+ D+
Sbjct: 923 CRAALQTESSLPQLCAELRKSFT-----VWRQVFGALAVSSAPLPHPSTEASRAMLQDEV 977
Query: 769 KEVTKQNTQELNKS 782
+ V +++ L ++
Sbjct: 978 EGVAQEDAVSLART 991
>gi|146415208|ref|XP_001483574.1| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 843
Score = 103 bits (257), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 153/709 (21%), Positives = 281/709 (39%), Gaps = 159/709 (22%)
Query: 146 IFYASRTHSQISQVISE-YKKTAYRVPMAV---------LASRKHYCTNKYV---RDKEN 192
I Y SRT S+I + + E +K YR L SRK+ C + + R
Sbjct: 122 IVYCSRTMSEIEKALIELHKLMEYRAEELGYVEDFRGLGLTSRKNLCIHPTISKERKGNV 181
Query: 193 IDEECKLLLGDR-----NLG----------------CPQFKNVHKVRGHPSLQKGGCHEV 231
+DE+C+ + + LG C +N++ + H + G V
Sbjct: 182 VDEKCRRITNGQLKQKIELGAVSPDLQANNPEAYTLCNYHENMNDMDSHSYVPNG----V 237
Query: 232 HDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILD 290
+ + L+N + + C Y+ R M ++ Y Y+++P I + ++ K +I+I D
Sbjct: 238 YSFDGLINYSKEKQICPYFTVRRMIPFCNIIIYSYHYLLDPKIAERVSKELSKDSIIIFD 297
Query: 291 EAHNIEDIARDAGSVDIDEDVLL----------------------KLQMELEQVCS---- 324
EAHNI+++ ++ S+D+ +D L KLQ E E++
Sbjct: 298 EAHNIDNVCIESLSLDLTDDTLKRATRGANKLGEAVDEMKAQDSEKLQNEYEKLVEGLRD 357
Query: 325 -----------VNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCW--------TG 365
NP + Q L++ + + G I RKA +HF S T
Sbjct: 358 AEIARDEELFMSNPALPQDLLD--EAIPGNI--RKA-------EHFISFLKRFIEYLKTR 406
Query: 366 DKALRELQEANIS-RQCFPILLECATKAIKEATDTESELPHLSGMSVITLEGLFSSLTYF 424
K L + E +S Q L K ++ ++ S L +S I + F
Sbjct: 407 MKVLHVISETPLSFLQHLKDLTFIERKPLRFCSERLSLLVRTLELSEIEDFNALKDIATF 466
Query: 425 FSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSG 484
+ ++ +QL L+ + + P L CL+ ++ K V + S+I+TSG
Sbjct: 467 ATLVSTYDRGFQLILEPFETDGATVPNP----ILHFTCLDASIAMKPVFDRFSSVIITSG 522
Query: 485 TLSPMNSFSSELGVQFGTCLEAPHVIDVDLQ-VLTSVISTGPDNYPLNASYK-------- 535
T+SP++ + L F T ++ + + + + L +++ G D +++ ++
Sbjct: 523 TISPLDMYPRMLN--FQTVIQESYTMTLARRSFLPMIVTKGADQVSISSQFEIRNDPSVV 580
Query: 536 -------------TADG-------YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQE 575
T DG Y ME + + W+ G + K + VE
Sbjct: 581 RNYGSLLIEFSKITPDGMVVFFPSYLYMESIISMWQTMGVLDEVWKHKLILVETPDAQVT 640
Query: 576 DFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIV 635
+ L+ Y + S G ++ R K D + + G R ++
Sbjct: 641 --SLALETYRKACSNGRGAVLLSVARGKVSEGIDFD--------HHYG-------RTVLM 683
Query: 636 VGIPFPNINDIQVSLKKKY-NDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYG 694
+GIPF + + ++ D Y+ + N++ A R Q +GR +R + DYG
Sbjct: 684 IGIPFQYTESRILKARLEFLRDNYQ-----IRENDFLSFDAMRHAAQCLGRVLRGKDDYG 738
Query: 695 AIILLDERFQEERNRAHISKWLRKSIKQYD---SFDASLEGLKSFFRDV 740
++L D RF+ ++N+ + KW+ +++ + D S D +L K F R +
Sbjct: 739 IMVLADRRFRRKKNQ--LPKWIAQALYESDENLSTDMALANAKKFLRSL 785
Score = 45.1 bits (105), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 6/65 (9%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+ + + V FPY + Y Q +M + TLD G+C +LE P+GTGK++SLL T+
Sbjct: 56 FFIDDLPVLFPYPRIYPEQYAYMSDIKKTLDVG---GNC--ILEMPSGTGKTISLLSLTV 110
Query: 77 AWQQN 81
A+Q +
Sbjct: 111 AYQMH 115
>gi|302666624|ref|XP_003024909.1| hypothetical protein TRV_00914 [Trichophyton verrucosum HKI 0517]
gi|291188986|gb|EFE44298.1| hypothetical protein TRV_00914 [Trichophyton verrucosum HKI 0517]
Length = 765
Score = 103 bits (256), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 175/811 (21%), Positives = 319/811 (39%), Gaps = 172/811 (21%)
Query: 62 PTGTGKSLSLLCSTLAWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIP 121
P+GTGK+++LL +A+QQ+ +L S + + E L + +
Sbjct: 2 PSGTGKTITLLALIVAYQQHYPEHRKLIYCSRTMSEIEKALSELRALMKYRSQKLGVVED 61
Query: 122 PSTNGQTAQVAM-NNKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKH 180
G T++ + + +VK++ + + A R S + I E K+ V +
Sbjct: 62 FRALGLTSRKNLCLHPSVKREKSGAVVDA-RCRSLTAGFIKEKKEKGEDVEL-------- 112
Query: 181 YCTNKYVRDKENIDEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNV 240
C VR I LL + +L P +L G V ++ L+
Sbjct: 113 -CIYHEVRSSSPISRSKADLLQNLDLLEPS-----------NLVPPG---VFTLDGLLKY 157
Query: 241 GQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIA 299
G+ + C Y++AR M ++ Y Y+++P I + ++ + +I++ DEAHNI+++
Sbjct: 158 GEQHKQCPYFSARRMMPYCNVIIYSYHYLLDPKIAERVSKELSRDSIIVFDEAHNIDNVC 217
Query: 300 RDAGSVDIDEDVLLK-------LQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLA 352
++ S+D+ ED L K L+ +++ + S + L Q LV +
Sbjct: 218 IESLSIDLTEDSLRKASRGANNLERKIDDMKSSDA---DKLQNEYQKLVEGLREADEARE 274
Query: 353 KREFQHFFSCWTGDKALRELQEANISR-QCFPILLECATKAIK---EATDTESELP---- 404
+ Q + D L+E NI R + F L+ + +K + T T SE P
Sbjct: 275 EE--QLMANPVLPDDLLKESVPGNIRRAEHFVAFLKRFIEYLKTRMKVTHTISETPLSFL 332
Query: 405 -HLSGMSVI-----------------TLEGL-------FSSLTYFFSRNGSHVSDYQLAL 439
HL ++ I TLE + + F + ++ + L L
Sbjct: 333 SHLKDLTFIERKPLRFCAERLTSLVRTLELVNIEDYQPLQEVATFATLAATYEKGFLLIL 392
Query: 440 QKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQ 499
+ + + P L CL+ A+ K V + S+I+TSGTLSP+ + LG
Sbjct: 393 EPFESDTATVPNP----ILHFTCLDAAIAIKPVFDRFSSVIITSGTLSPLEMYPKMLG-- 446
Query: 500 FGTCLEAPHVIDVDLQ-VLTSVISTGPDNYPLNASYK---------------------TA 537
F L+ + + + + L +++ G D +++S++ T
Sbjct: 447 FDAALQESYSMTLARRSFLPMIVTRGSDQAQISSSFQIRNDPGVVRNYGNMLLEFCRITP 506
Query: 538 DG-------YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQ 590
DG Y ME + + W+ G + K + VE SQE + L+ Y +
Sbjct: 507 DGVVVFFPSYLYMESIISMWQGMGILDSVWNYKLILVETP-DSQES-SLALETYRTACCN 564
Query: 591 GSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKI---------------V 635
G +GA L V RGK+
Sbjct: 565 G------------------------------RGAVLLCVARGKVSEGIDFDHHYGRTVLC 594
Query: 636 VGIPFPNINDIQVSLKKKY-NDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYG 694
+G+PF + + ++ + YR + N++ A R Q +GR +R + DYG
Sbjct: 595 IGVPFQYTESRILKARLEFLRENYR-----IRENDFLSFDALRHAAQCLGRVLRGKDDYG 649
Query: 695 AIILLDERFQEERNRAHISKWLRKSIKQYD---SFDASLEGLKSFFRDVKGWVGKKMFNG 751
++L D RFQ++RN+ + KW+ +++ + + S D ++ KSF K M
Sbjct: 650 VMVLADRRFQKKRNQ--LPKWISQAMLESETNLSTDMAVATAKSFL--------KSMAQP 699
Query: 752 LENSDNDVDHVSSMDQCKEVTKQNTQELNKS 782
+ D + S++ K ++ QE+ K+
Sbjct: 700 FKAKDQEGISTWSLEDLKRHLEKQKQEIEKT 730
>gi|324515332|gb|ADY46168.1| ATP-dependent RNA helicase chl1, partial [Ascaris suum]
Length = 454
Score = 103 bits (256), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 97/369 (26%), Positives = 151/369 (40%), Gaps = 90/369 (24%)
Query: 24 QVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW----- 78
+ FP+ PY Q+ M + R +G + ESPTGTGKSLS +C+TL+W
Sbjct: 3 EFSFPFPPYDIQVSLMREI-----RKCVEGGKVGIFESPTGTGKSLSTICATLSWLECFE 57
Query: 79 -QQNCKLKNQLAN------------------------------------------ISHSK 95
+Q +L+ QL + I ++
Sbjct: 58 REQREQLEKQLKDAEEIGNDDGDDWVAAYKKKFEAKRQASGAEEKLQNLRLIDERIKQAR 117
Query: 96 PDTE------AVTD-----PLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKKMTP 144
D + A D PL+N P+ I P + + + + K+
Sbjct: 118 SDKKERKRRCAADDMDDELPLSNENDDDPDKD---IAPDEEYSSDDESTSQNSAKEPSCT 174
Query: 145 TIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKEN---IDEECKLLL 201
IFYASRTHSQ+ Q SE KT +R + + SR+ C N VR ++ I+E+C L
Sbjct: 175 KIFYASRTHSQLQQFASEILKTRFRPRIVTVGSRQALCVNDVVRSLKHSHLINEKCDELR 234
Query: 202 GDRNLGCPQ-FKNVHKVRGHPSLQKGGC--HEVHDIEDL---------------VNVGQV 243
+ Q HKV S+ + C IEDL V G+
Sbjct: 235 HKKTANKRQKVDQNHKVSS--SVPQCSCPYWRADPIEDLTDQILSLKLPTVSKVVQSGKA 292
Query: 244 VRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAG 303
+ C Y+A+RS Q+V PY +++ R A V+++G ++I+DEAHN+
Sbjct: 293 LFACPYFASRSSLAMCQVVLLPYQVLLHKSTREAWGVNLEGNVVIIDEAHNLLQTVAAVH 352
Query: 304 SVDIDEDVL 312
SV++ + +
Sbjct: 353 SVELSQSAI 361
>gi|302799956|ref|XP_002981736.1| hypothetical protein SELMODRAFT_9067 [Selaginella moellendorffii]
gi|300150568|gb|EFJ17218.1| hypothetical protein SELMODRAFT_9067 [Selaginella moellendorffii]
Length = 65
Score = 103 bits (256), Expect = 9e-19, Method: Composition-based stats.
Identities = 46/65 (70%), Positives = 56/65 (86%), Gaps = 2/65 (3%)
Query: 18 YHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRD--GHCHALLESPTGTGKSLSLLCST 75
Y + G++VEFPY+ YGSQL FM +VI+TL+RA RD GHC+ALLESPTG+GKSLSLLC+
Sbjct: 1 YQICGVKVEFPYRAYGSQLAFMGKVITTLERAFRDPDGHCNALLESPTGSGKSLSLLCAA 60
Query: 76 LAWQQ 80
LAWQQ
Sbjct: 61 LAWQQ 65
>gi|320583366|gb|EFW97581.1| DNA repair helicase RAD3 [Ogataea parapolymorpha DL-1]
Length = 1061
Score = 103 bits (256), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 163/770 (21%), Positives = 315/770 (40%), Gaps = 160/770 (20%)
Query: 122 PSTNGQTAQVAMNNKNVKKKMT----PTIFYASRTHSQISQVISE-YKKTAYR------- 169
PS G+T +++ + V +M I Y SRT S+I + + E +K YR
Sbjct: 339 PSGTGKT--ISLLSLTVAYQMHYPEHRKIVYCSRTMSEIEKALIELHKLMEYRSKELGFV 396
Query: 170 --VPMAVLASRKHYCTNKYV-RDKENI--DEECKLLLGDRNLGCPQFKNVHKVRGHPSLQ 224
L SRK+ C + R+++ + DE C R + Q K + + Q
Sbjct: 397 EDFRGLGLTSRKNLCLHPVASRERKGVVVDEMC------RRMTNGQLKARIEQGQASTDQ 450
Query: 225 KGGCHE--------------VHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYII 270
HE V+ E L+ ++ C Y+ R M ++ Y Y++
Sbjct: 451 LCSFHEKLYEKDPANLVPPGVYSFEQLMKYCKMEGTCPYFTIRRMMPFCNIIIYSYHYLL 510
Query: 271 NPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLK--------------- 314
+P I + ++ + +I+I DEAHNI+++ ++ S+D+ EDVL +
Sbjct: 511 DPKIAERVSKELSRDSIIIFDEAHNIDNVCIESLSLDLTEDVLRRASKGANALARKVEEV 570
Query: 315 -------LQMELEQVCS----------------VNPMIYQPLIEMTQDLVGWIERRK--A 349
LQ E E++ VNP++ P +T+ + G I R +
Sbjct: 571 KKTDSKRLQDEYEKLVEGLRESEIYHTDEDAFMVNPVL--PDDVLTEAVPGSIRRAEHFI 628
Query: 350 TLAKREFQHFFSCWTGDKALRELQEANIS-RQCFPILLECATKAIKEATDTESELPHLSG 408
+ KR ++ T K L + E +S Q L K ++ ++ S L +
Sbjct: 629 SFLKRFIEYL---KTRMKVLHVISETPVSFLQHLKQLTFIDRKPLRFCSERLSLL--VRT 683
Query: 409 MSVITLEGLFS--SLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPA 466
+ V+ +E + + F + ++ + + L L+ Y ++ P L CL+ +
Sbjct: 684 LEVVEIEEFMALKDIATFGTLVSTYDTGFVLILEPYETENATVPNP----ILRFACLDAS 739
Query: 467 VVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQ-VLTSVISTGP 525
+ K + E S+I+TSGT+SP++ + L F T ++ + + +D + L V++ G
Sbjct: 740 IAMKPIFERFSSVIITSGTISPLDMYPRMLN--FETVVQESYTMTLDRRSFLPMVVTKGS 797
Query: 526 DNYPLNASYK---------------------TADG-------YKLMEKLCNRWRETGQWS 557
D +++ ++ T DG Y ME + ++W+ G
Sbjct: 798 DQVAISSRFEIRNDPSVVRNYGTLLIEFSKITPDGMVVFFPSYLYMESIISQWQTMGILD 857
Query: 558 RLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQE 617
+ K + VE ++ + L+ Y + S G ++ R K D +
Sbjct: 858 EVWKYKLILVETPDA--QETSLALETYRKACSNGRGAVLLSVARGKVSEGIDFD------ 909
Query: 618 NANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKY-NDTYRSSKNLLSGNEWYCNQAF 676
+ G R +++GIPF + + ++ D Y+ + N++ A
Sbjct: 910 --HHYG-------RTVLMIGIPFQYTESRILKARLEFLRDHYQ-----IRENDFLSFDAM 955
Query: 677 RALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYD---SFDASLEGL 733
R Q +GR +R + DYG ++L D RF + ++ + KW+ +++ D S D ++
Sbjct: 956 RHAAQCLGRVLRGKDDYGVMVLADRRFA--KKKSQLPKWIAQALSDADINLSTDMAIASA 1013
Query: 734 KSFFRDVKGWVGKKMFNGLENSDNDVDHVSSMDQCKEVTKQNTQELNKSD 783
K F R + + +K + + V V ++DQ ++ K+ + + ++
Sbjct: 1014 KKFLRTLAQPIEQK------DQEQGVS-VWTLDQLEKYQKEQNERFSVTN 1056
Score = 48.1 bits (113), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 46/83 (55%), Gaps = 6/83 (7%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+ + + V FPY + Y Q +MC + TLD G+C +LE P+GTGK++SLL T+
Sbjct: 299 FFIDDLPVLFPYPKIYPEQYAYMCDIKRTLDVG---GNC--ILEMPSGTGKTISLLSLTV 353
Query: 77 AWQQNCKLKNQLANISHSKPDTE 99
A+Q + ++ S + + E
Sbjct: 354 AYQMHYPEHRKIVYCSRTMSEIE 376
>gi|170582249|ref|XP_001896044.1| helicase [Brugia malayi]
gi|158596835|gb|EDP35112.1| helicase, putative [Brugia malayi]
Length = 733
Score = 103 bits (256), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 143/340 (42%), Gaps = 75/340 (22%)
Query: 24 QVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW----- 78
+ FP++PY Q+ M +IS ++ + +LESPTGTGKS+S++C+TL W
Sbjct: 3 EFSFPFEPYDIQVSLMRSIISCINEGK-----IGILESPTGTGKSMSIICATLTWLEXFE 57
Query: 79 -QQNCKLKNQLANISHSKPDTEAV------TDPLANGGGFIPESQ-----PSTIPPSTNG 126
++ L+ QL + D + + + + F E + I +
Sbjct: 58 AERKVNLEKQLKXVEXVGKDDDWLNAHIKKVKAVEDAKEFYSELENDQKIEERIQKALKN 117
Query: 127 QTAQ-------------------------VAMNNKNVKKKM---TPT---IFYASRTHSQ 155
T + N + KK+ TPT + YA+RTHSQ
Sbjct: 118 LTVERKRKLLNDEDIEGKNDDDETDDILDEDFTNDQLAKKIEEPTPTCTKVIYATRTHSQ 177
Query: 156 ISQVISEYKKTAYRVPMAVLASRKHYCTNKYVR--DKENI-DEECKLLLGDRNLGCPQFK 212
+ Q E KT ++ + L SR+H C N+ VR K N+ E C L ++ Q
Sbjct: 178 LLQFAEEITKTRFQPRVVTLGSRQHLCINESVRALQKTNLMTERCNELRDNKASEKRQKD 237
Query: 213 NVHKVRGHPSLQKGGC-----HEVHDIED------------LVNVGQVVRGCSYYAARSM 255
+ K KG C + D+ D LV+ + + C Y+A+R
Sbjct: 238 DDDKYVAKAC--KGSCPFARSDAIEDLCDQILASKLSSTPQLVDYSKKISACPYFASRKS 295
Query: 256 ADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNI 295
+QLV PY + R A +++KG ++++DEAHN+
Sbjct: 296 VAYSQLVLLPYQILFQEEARKAWGIELKGNVIVIDEAHNL 335
>gi|380016559|ref|XP_003692248.1| PREDICTED: probable ATP-dependent RNA helicase DDX11-like [Apis
florea]
Length = 856
Score = 102 bits (255), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 147/318 (46%), Gaps = 41/318 (12%)
Query: 458 LSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLE------APHVID 511
+ LNPA+ F D+ + ++IL GT++PMN F +L + G E HVI
Sbjct: 549 MKFLLLNPAIHFHDIVRDARAVILAGGTMAPMNEFIEQLFIAAGAAPERIITFSCDHVIP 608
Query: 512 VDLQVLTSVISTGPDNYPLNASYKTADGYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKG 571
+ ++ ++I+ GP +++ + KL+++L R S + + P
Sbjct: 609 EE-NIICNIITHGPTGIEFEFNFQNRENTKLLDEL---GRTLLNLSNIIPAGIVVFLPSY 664
Query: 572 GSQEDFEIVLKHYYNS--ISQGS-KCAVVRKKRVKREGNNDLNTIE---SQENANKKGAS 625
+ E+V KH S I++ S K ++R+ ++ + N L Q ++ G+
Sbjct: 665 NFE---ELVYKHLEKSGIIAKLSLKKHILREPKLASQVNKILEQYSFYIKQPQNSQNGSL 721
Query: 626 FLAVCRGK---------------IVVGIPFPNINDIQVSLKKKY-NDTYRSSKNLLSGNE 669
+V GK IVVG+P+PNI +++ K KY N+ + +G
Sbjct: 722 LFSVVGGKLSEGLNFSDDLGRCIIVVGMPYPNIKSLELQEKMKYLNENIKPD----AGQN 777
Query: 670 WYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDAS 729
+Y N +A+NQ IGR IRH DY +ILLD+R+ + + W+++++ + +F
Sbjct: 778 FYENSCMKAVNQCIGRAIRHINDYSTVILLDKRYIHKTKV--LPHWIQRTLMIHKTFGGM 835
Query: 730 LEGLKSFFRDVKGWVGKK 747
+ L FF K KK
Sbjct: 836 IGNLAKFFNKKKINFDKK 853
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 99/176 (56%), Gaps = 14/176 (7%)
Query: 146 IFYASRTHSQISQVISEYKKTAY--RVPMAVLASRKHYCTNKYVRDKE--NIDEECKLLL 201
IF+ SRTHSQ+SQ I E KK+ Y + + L SR++YC NK V+ + N+ EC L L
Sbjct: 192 IFFCSRTHSQLSQFIEELKKSPYSKNISVVTLTSRQNYCVNKNVKKLKHLNLINECCLQL 251
Query: 202 GDRNLGCPQFKNVHK---------VRGHPSLQKGGCH-EVHDIEDLVNVGQVVRGCSYYA 251
+ K++ + + G+ L G ++ DIE++V G+ ++ C+YYA
Sbjct: 252 QRKKTTVKDEKDLKRRKIAINCPFIPGNQDLLLGEILIQIQDIEEIVQKGESLKTCTYYA 311
Query: 252 ARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDI 307
+R +QL+ PY+ I++ R ++ +++KG +LI+DEAHN+ + SV I
Sbjct: 312 SRKAIPYSQLILVPYNSILHKNTRISLGINLKGNVLIIDEAHNLLEAIEKMHSVVI 367
Score = 48.1 bits (113), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 5/52 (9%)
Query: 27 FPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
FP+ PY Q FM + L+ A+ + ESPTGTGKS+S++C L W
Sbjct: 9 FPFSPYLIQNQFMKELYKCLENAKL-----GIFESPTGTGKSMSIICGALKW 55
>gi|198436769|ref|XP_002122486.1| PREDICTED: similar to DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide
11 [Ciona intestinalis]
Length = 907
Score = 102 bits (255), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 139/320 (43%), Gaps = 56/320 (17%)
Query: 463 LNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTC--------LEAPHVIDVDL 514
LNPA F+ + E ++I+ GT+ P + +L + + HVID
Sbjct: 600 LNPASHFQQILEECRALIVAGGTMQPSSCLIDQLLAKTESEKHRSRIVEFSCGHVIDGKR 659
Query: 515 QVLTSVISTGPDNYPLNASYKTADGYKLMEK----------------------------L 546
Q+L +S+GP +++ +KL+++ +
Sbjct: 660 QLLPLALSSGPSGVEFEFTFQKRSNFKLIDETGRLLLNISNIIPGGVVCFFPSYDYERFV 719
Query: 547 CNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRV---K 603
RW++ G SRL KK +F EPK ++ D +++ ++C K V K
Sbjct: 720 VQRWQDAGILSRLEMKKKIFREPKKANEVD---------KLLTEYTRCV----KNVGPGK 766
Query: 604 REGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYNDTYRS--S 661
+ G L+ + + + + L C ++VG+P+PN ++ K Y D +
Sbjct: 767 QNGGLLLSVVGGKMSEGINFSDDLGRCV--VMVGLPYPNSQSPELREKMNYLDRNMKCHT 824
Query: 662 KNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIK 721
+G Y N +A+NQ+IGR IRHR DY +IILLD+R+ + KW+ +
Sbjct: 825 DGRTAGQVHYENLCMKAVNQSIGRAIRHRNDYASIILLDKRYSRPSVANKLPKWISNHLS 884
Query: 722 QYDSFDASLEGLKSFFRDVK 741
++ F ++ +K FF + K
Sbjct: 885 SHEKFGSAFASIKQFFHNKK 904
Score = 83.2 bits (204), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 88/183 (48%), Gaps = 33/183 (18%)
Query: 146 IFYASRTHSQISQVISEYKKTAY-------------RVPMAVLASRKHYCTNKYVRDKEN 192
IF+ SRTHSQ+SQ + E +K+ + ++ MA L SR + C N VR ++
Sbjct: 221 IFFCSRTHSQLSQFVKELQKSPFGNNVHCDADEGDFQITMASLGSRNNLCINDSVRKLKS 280
Query: 193 ID---EECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGC-----------------HEVH 232
++ E C + + + + K + + K C ++H
Sbjct: 281 VNLMNERCLEMQKNSKPKSKKEDDQDKPKRQKKVSKSTCCYYTNHDGIAQLTNTIVGKIH 340
Query: 233 DIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEA 292
DIE+++ G+ + C YYA+R +QLV PY +++ R A + +K +++I+DEA
Sbjct: 341 DIEEVIKEGKSLEACPYYASRHAVTLSQLVVLPYQTLLHKATRQASGIKLKDSVVIIDEA 400
Query: 293 HNI 295
HN+
Sbjct: 401 HNL 403
Score = 50.8 bits (120), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 32/52 (61%), Gaps = 5/52 (9%)
Query: 27 FPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
FP++PY Q+ FM +L A D + ESPTGTGKSLSL+C +L W
Sbjct: 19 FPFEPYSIQVDFM----KSLYHAIEDKKI-GIFESPTGTGKSLSLICGSLTW 65
>gi|443897877|dbj|GAC75216.1| helicase of the DEAD superfamily [Pseudozyma antarctica T-34]
Length = 1454
Score = 102 bits (255), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 96/185 (51%), Gaps = 21/185 (11%)
Query: 144 PTIFYASRTHSQISQVISEYKKTAYR-----------VPMAVLASRKHYCTNKYV----- 187
P + YASRTHSQ+SQ ++E KKT++ V L SRK C N+ V
Sbjct: 221 PRVVYASRTHSQLSQFVAELKKTSFGEVDVLNPTDLPVRTIALGSRKQMCINESVQHIAR 280
Query: 188 -RDKENIDEECKLLLGDRNLGC---PQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQV 243
+ E ++E C L+ + C P F + + + +V DIEDLV +G+
Sbjct: 281 RKGTEAMNERCLELMKAKKGKCAALPSFDLAGRAQIL-EFRDAAMAQVGDIEDLVQLGRD 339
Query: 244 VRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAG 303
+ C Y+AAR+ A A+LV PY+ ++ R A+ + ++G ++++DEAHN+ D
Sbjct: 340 TKTCPYFAARTSAKQAELVTLPYNLLLQKDARQALGISLEGCVVLIDEAHNLIDTILGTH 399
Query: 304 SVDID 308
SV ID
Sbjct: 400 SVAID 404
Score = 53.9 bits (128), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 37/59 (62%), Gaps = 7/59 (11%)
Query: 27 FPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW-QQNCK 83
FPY Q Y QL M +V ST++ DG L ESPTGTGKSLSL+C+ W +QN K
Sbjct: 28 FPYPQAYSIQLDLMRQVFSTIE----DGKV-GLFESPTGTGKSLSLICAAFTWLRQNAK 81
Score = 53.1 bits (126), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 98/232 (42%), Gaps = 60/232 (25%)
Query: 463 LNPAVVFKDVAELSLSIILTSGTLSPMNSFSSEL--------GVQFGTCLEAPHVIDVDL 514
LNP+ FK + + + S+IL GT+ P++ F +L V+F +C HVI
Sbjct: 584 LNPSHAFKSLVDEARSVILAGGTMEPLSDFRQQLLPFLPRDKLVEF-SC---GHVIPPS- 638
Query: 515 QVLTSVISTGPDNYPLNASYKTADGYKLMEK-------LCN------------------- 548
++ SV+ + P P + + +L+++ LCN
Sbjct: 639 NLMVSVLGSSPKGLPFEFKFDSRANAELIDELGRTLINLCNVAPAGLVVFVPSYAFLDRI 698
Query: 549 --RWRETGQWS---RLNAKKPLFVEPKGGSQEDFEIVLKHYYNSI-SQGSKCAVVRKKRV 602
RW++ RL AKK +F EPK + + + VL+ Y +I GS + V
Sbjct: 699 MARWKDAASGELHKRLGAKKKIFSEPK--TTMEVDGVLQDYTAAIRDAGSAGGAIMFAVV 756
Query: 603 KREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKY 654
+ + +N + + R ++VG+PF N++ +++ + KY
Sbjct: 757 GAKLSEGINFSDD-------------LARAVVMVGMPFANMHSPELAERMKY 795
>gi|340721189|ref|XP_003399007.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DDX11-like [Bombus terrestris]
Length = 857
Score = 102 bits (255), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 102/190 (53%), Gaps = 14/190 (7%)
Query: 146 IFYASRTHSQISQVISEYKKTAY--RVPMAVLASRKHYCTNKYVRDKE--NIDEECKLLL 201
IF+ SRTHSQ+SQ I E +K+ Y V + L SR++YC NK V+ + N+ EC L L
Sbjct: 194 IFFCSRTHSQLSQFIGELRKSPYSKNVSVITLTSRQNYCINKNVKKLKHLNLINECCLQL 253
Query: 202 GDRNLGCPQFKNVHKVRGHPS----------LQKGGCHEVHDIEDLVNVGQVVRGCSYYA 251
+ K++ + + S L + ++ DIE++V G+ ++ C+YYA
Sbjct: 254 QRKKATAKDEKDLKRKKMTSSCPFVPGNQDLLIRESLMQIQDIEEIVQKGENLKTCAYYA 313
Query: 252 ARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDV 311
+R QL+ PY+ I++ R + +++KG ILI+DEAHN+ + + SV I
Sbjct: 314 SRKAVSYGQLILVPYNTILHKNTRISSGINLKGNILIIDEAHNLLEAIENMHSVIITGRN 373
Query: 312 LLKLQMELEQ 321
LL +L Q
Sbjct: 374 LLHCYSQLSQ 383
Score = 102 bits (255), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 144/319 (45%), Gaps = 55/319 (17%)
Query: 458 LSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLE------APHVID 511
+ LNPA F D+ + ++IL GT++PMN F +L + G E HVI
Sbjct: 553 IKFLLLNPAAHFHDIIRDARAVILAGGTMAPMNEFIDQLFIAAGASSERIVTYSCDHVIP 612
Query: 512 VDLQVLTSVISTGPDNYPLNASYKTADGYKLMEKL-------CN---------------- 548
+ ++ S+ + GP +++ + KL+++L CN
Sbjct: 613 EE-NIVCSITTHGPTGIEFEFNFQNRENTKLLDELGRTLLNLCNIIPAGIIVFLPSYNFE 671
Query: 549 -----RWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVK 603
+G +L+ KK + EPK SQ +LK Y ++ +
Sbjct: 672 ELMYKHLENSGIIRKLSLKKHILREPKSASQ--VHEILKEY---------SLHIKSPKNS 720
Query: 604 REGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKY-NDTYRSSK 662
+ G+ + + + + + L C IVVG+P+PNI +++ K KY N+ +S
Sbjct: 721 QNGSLLFSVVGGKLSEGLNFSDDLGRCV--IVVGMPYPNIQSLELQEKMKYLNENIKSD- 777
Query: 663 NLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQ 722
+G +Y N +A+NQ IGR IRH DY +ILLD+R+ + + +W+++++
Sbjct: 778 ---AGQNFYENSCMKAVNQCIGRAIRHINDYSTVILLDKRYSYKIKA--LPQWIQRTLII 832
Query: 723 YDSFDASLEGLKSFFRDVK 741
+ SF +++ + FF K
Sbjct: 833 HKSFGSTIGAISKFFNKKK 851
>gi|403159247|ref|XP_003319882.2| hypothetical protein PGTG_00794 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375168014|gb|EFP75463.2| hypothetical protein PGTG_00794 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 826
Score = 102 bits (254), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 90/158 (56%), Gaps = 7/158 (4%)
Query: 146 IFYASRTHSQISQVISEYKKTAY--RVPMAVLASRKHYCTNKYVRDK----ENIDEECKL 199
I++ SRTHSQ++Q ISE +KT + +V + L SR + C N+ VRDK E I+E C +
Sbjct: 208 IYFTSRTHSQLNQFISEIRKTTFQDKVRVITLGSRANLCINRSVRDKAQTLEAINEAC-M 266
Query: 200 LLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDA 259
L + CP ++ + + ++HDIE+L +G+V C YY +R A
Sbjct: 267 DLQKSDKRCPHLPSLDEQDRMNDFRDHALAQIHDIEELAELGRVQNCCPYYGSRKAVRRA 326
Query: 260 QLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIED 297
Q+V PY+ ++ R A+ + ++ ++I+DEAHN+ D
Sbjct: 327 QIVTLPYNLLLQNSSREALGISLEKNVVIVDEAHNLID 364
Score = 82.0 bits (201), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 116/267 (43%), Gaps = 64/267 (23%)
Query: 455 THTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSEL--GVQFGTCLE--APHVI 510
T T+ L+ + F D+ + S++L GT++P++ F S+L V L+ H++
Sbjct: 538 TITIKYQLLDASSSFSDIVSEARSVVLAGGTMAPLDDFHSQLFPFVSPEKILDFSCSHIV 597
Query: 511 DVDLQVLTSVISTGPDNYPLNASYKTAD----------------------------GYKL 542
+ +L +S GP L + + D Y
Sbjct: 598 PPE-HLLVRAVSKGPMGTNLQLKFSSKDDPKMQNDLGQSVANICNIIKDGVICFFPSYAS 656
Query: 543 MEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQ----------GS 592
++ L +RW++TG W+RL KK +F+EPK + D + +L Y +++Q G
Sbjct: 657 LDTLTDRWKKTGLWTRLENKKKIFIEPKSAA--DVDKILNGYSAAVNQSTNPTSVSGGGL 714
Query: 593 KCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKK 652
AVV K EG N N + CR IV+GIP+PN +++ +
Sbjct: 715 MLAVVGGKL--SEGINFSNNL----------------CRAVIVIGIPYPNSQSVELKERI 756
Query: 653 KYNDTYRSSKNLLSGNEWYCNQAFRAL 679
KY + + ++ +G +Y N AF+A+
Sbjct: 757 KYVENLKGAQK-DAGKNFYANLAFKAV 782
Score = 54.3 bits (129), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 35/55 (63%), Gaps = 5/55 (9%)
Query: 24 QVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
Q FP++PY Q FM RV+ + Q+ G + ESPTGTGKSLSL+C+ L W
Sbjct: 18 QFSFPFEPYEIQRRFM-RVLFEVIEHQKVG----IFESPTGTGKSLSLICAALTW 67
>gi|226289058|gb|EEH44570.1| DNA repair helicase RAD3 [Paracoccidioides brasiliensis Pb18]
Length = 791
Score = 102 bits (254), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 157/674 (23%), Positives = 275/674 (40%), Gaps = 158/674 (23%)
Query: 146 IFYASRTHSQISQVISEYKK-TAYRVPMAV---------LASRKHYCTNKYVRDKEN--- 192
+ Y SRT S+I + ++E K YR L SRK+ C + V+ +++
Sbjct: 117 LIYCSRTMSEIEKALAELKALMKYRAQQLGYTEDFRGLGLTSRKNLCLHPSVKREKSGTI 176
Query: 193 IDEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAA 252
+D C+ SL G E + G+ V C Y+
Sbjct: 177 VDARCR-----------------------SLTAGFVKEKKE------RGEDVELCIYH-- 205
Query: 253 RSMADDAQLVFC-----PYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVD 306
++ FC Y Y+++P I + ++ K +I++ DEAHNI+++ ++ S+D
Sbjct: 206 -------EMPFCNVIIYSYHYLLDPKIAERVSQELSKDSIVVFDEAHNIDNVCIESLSID 258
Query: 307 IDEDVLLK-------LQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHF 359
+ ED L K L+ ++++ S + + L Q LV + R+A A++E Q
Sbjct: 259 LTEDSLRKASRGANNLERRIDEMKSSDA---EKLQNEYQKLVEGL--READEARQEEQLM 313
Query: 360 FSCWTGDKALRELQEANISR-QCFPILLECATKAIK---EATDTESELP-----HLSGMS 410
+ D L+E NI R + F L+ + +K + T T SE P HL ++
Sbjct: 314 ANPALPDDLLKEAVPGNIRRAEHFVAFLKRFIEYLKTRMKVTHTISETPPSFLAHLKDLT 373
Query: 411 VI-----------------TLEGL-------FSSLTYFFSRNGSHVSDYQLALQKYIKRD 446
I TLE + + F + ++ + L L+ +
Sbjct: 374 FIERKPLRFCAERLTSLVRTLELMNLEDYQPLQQVAAFATLAATYEKGFLLILEPFESDT 433
Query: 447 SKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEA 506
+ P L CL+ A+ K V + S+I+TSGTLSP+ + LG F T L+
Sbjct: 434 ATVPNP----ILHFTCLDAAIAIKPVFDRFSSVIITSGTLSPLEMYPKMLG--FTTVLQE 487
Query: 507 PHVIDVDLQ-VLTSVISTGPDNYPLNASYKTADGYKLMEKLCNRWRETGQWSRLNAKKPL 565
+ + + + L +++ G D +++S++ + ++ N E +SR+ +
Sbjct: 488 SYSMTLARRSFLPMIVTRGSDQAQISSSFQIRNDPGVVRNYGNLLLE---FSRITPDGIV 544
Query: 566 FVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENA--NKKG 623
P E I + SQ S A +E+ A N +G
Sbjct: 545 VFFPSYLYMESI-ISMWQVETPDSQESSLA-----------------LETYRTACCNGRG 586
Query: 624 ASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKKY-NDTYRSSKNLLSG 667
A L V RGK I +G+PF + + ++ + YR +
Sbjct: 587 AILLCVARGKVSEGIDFDHHYGRTVICIGVPFQYTESRILKARLEFLRENYR-----IRE 641
Query: 668 NEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYD--- 724
N++ A R Q +GR +R + DYG ++L D RFQ + RA + KW+ +++ + +
Sbjct: 642 NDFLSFDAMRHAAQCLGRVLRGKDDYGVMVLADRRFQ--KKRAQLPKWISQAMLESETNL 699
Query: 725 SFDASLEGLKSFFR 738
S D ++ KSF R
Sbjct: 700 STDMAMATAKSFLR 713
Score = 50.1 bits (118), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 6/78 (7%)
Query: 23 IQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQN 81
+ V FPY + Y Q +MC + TLD GHC +LE P+GTGK++SLL +A+QQ+
Sbjct: 56 LPVLFPYPRIYPEQYAYMCDLKKTLDTG---GHC--VLEMPSGTGKTVSLLSLIIAYQQH 110
Query: 82 CKLKNQLANISHSKPDTE 99
+ +L S + + E
Sbjct: 111 KPEQRKLIYCSRTMSEIE 128
>gi|321249881|ref|XP_003191608.1| general RNA polymerase II transcription factor [Cryptococcus gattii
WM276]
gi|317458075|gb|ADV19821.1| general RNA polymerase II transcription factor, putative
[Cryptococcus gattii WM276]
Length = 799
Score = 102 bits (254), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 153/712 (21%), Positives = 272/712 (38%), Gaps = 173/712 (24%)
Query: 146 IFYASRTHSQISQVISEYKK-TAYRVPMAV---------LASRKHYCTNKYVRDKEN--- 192
+ Y SRT +I + ++E K+ AYR M L SR++ C + V ++
Sbjct: 69 LIYCSRTVPEIEKALAELKRLMAYRADMGANDGNFRGLGLTSRRNLCLHPEVSKEKKGKV 128
Query: 193 IDEECKLLLGDRNLGCPQFKNVHKVRGHP-SLQKGGCHE--------------VHDIEDL 237
+D C+ L C K R P S+ HE V+ ++D+
Sbjct: 129 VDSRCRDLTS--AYAC------EKGRADPGSVPLCSFHEELNNYEPGNLIPPGVYTLDDV 180
Query: 238 VNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIE 296
GQ C Y+ R M +V + Y+++P + + ++ K +I++ DEAHNI+
Sbjct: 181 KKYGQEKGVCPYFTIRRMLPFLDVVIYSFHYLLDPKVAEQVSAEMSKESIVVFDEAHNID 240
Query: 297 DIARDAGSV----------------------DIDEDVLLKLQMELEQVCS---------- 324
++ ++ S+ +I E KL+ E ++
Sbjct: 241 NVCIESLSIDLTRPMLDSAARSVNKLNDKIAEIKETDAKKLEDEYAKLVEGLQEANVSAE 300
Query: 325 -----VNPMIYQPL--------IEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRE 371
V+P++ + + I + + +++R L R T L
Sbjct: 301 DEDMLVSPVLSKDMVDEAVPGNIRKAEHFIAFLKRFIEYLKTRMRVLHVVAETPQSFLAH 360
Query: 372 LQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSH 431
L+E Q P L+ A++ + T EL +L S + F +L + +
Sbjct: 361 LKEITYIEQR-P--LKFASERLTSLVRT-LELTNLEEHSALQKVAGFGTLVATYEKG--- 413
Query: 432 VSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNS 491
+ L L+ Y + P + T CL+P++ V + S+++TSGT+SP++
Sbjct: 414 ---FLLILEPYETEHATVPNPIFHFT----CLDPSLAIAPVFDRFASVVITSGTISPLDM 466
Query: 492 FSSELGVQFGTCLEAPHVIDVDLQV-LTSVISTGPDNYPLNASYKT-------------- 536
+ L QF +E + + + L VI+ G D P+++ ++
Sbjct: 467 YPKML--QFQPVMEQSYPMTLTRNAFLPMVITRGSDQVPISSRFEVRNDPAVVRNFGSIL 524
Query: 537 -------ADG-------YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLK 582
DG Y ME + + W + G S + K LFVE + I L+
Sbjct: 525 IEMARTVPDGVVAFFPSYLYMESIVSAWYDMGILSEVWKHKLLFVETPDAMETS--IALR 582
Query: 583 HYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPN 642
+Y RE N N +GA L+V RGK+ GI F +
Sbjct: 583 NY-------------------REACN-----------NGRGAVLLSVARGKVSEGIDFDH 612
Query: 643 IND---IQVSLKKKYNDT--------YRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRF 691
I + +Y ++ + + + N++ A R Q +GR +R +
Sbjct: 613 NYGRAVIMFGIPYQYTESRILKARLEFLRDNHRIRENDYLTFDAMRHAAQCVGRVLRGKT 672
Query: 692 DYGAIILLDERFQEERNRAHISKWLRKSIKQYD---SFDASLEGLKSFFRDV 740
D+G +I D+RF + RA + KW+ I + S D ++ K F R +
Sbjct: 673 DWGLMIFADKRFARQDKRAKLPKWINSYITEAHSNLSTDVAVSLAKKFIRQI 724
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 129/297 (43%), Gaps = 45/297 (15%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+ +G + V FPY + Y Q +M + +TLD GHC +LE P+GTGK++SLL +
Sbjct: 3 FMLGDLPVLFPYDRLYPEQYSYMADLKTTLDAG---GHC--VLEMPSGTGKTVSLLSLII 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNK 136
A+ Q K +L S + P+ E L + A + N+
Sbjct: 58 AYMQFYPNKRKLIYCSRTVPEIEKALAELKRLMAY----------------RADMGANDG 101
Query: 137 NVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE 196
N + + SR + + +S+ KK V+ SR T+ Y +K D
Sbjct: 102 NFRG-----LGLTSRRNLCLHPEVSKEKKG------KVVDSRCRDLTSAYACEKGRADPG 150
Query: 197 CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMA 256
L C + ++ + G V+ ++D+ GQ C Y+ R M
Sbjct: 151 SVPL-------CSFHEELNNYEPGNLIPPG----VYTLDDVKKYGQEKGVCPYFTIRRML 199
Query: 257 DDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVL 312
+V + Y+++P + + ++ K +I++ DEAHNI+++ ++ S+D+ +L
Sbjct: 200 PFLDVVIYSFHYLLDPKVAEQVSAEMSKESIVVFDEAHNIDNVCIESLSIDLTRPML 256
>gi|429963255|gb|ELA42799.1| DNA repair helicase (rad3) [Vittaforma corneae ATCC 50505]
Length = 747
Score = 102 bits (253), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 179/850 (21%), Positives = 313/850 (36%), Gaps = 218/850 (25%)
Query: 18 YHVGGIQVEFPYQP-YGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+ + G+ + FPY+ Y QL + + S L Q GH L+E P+GTGK+++LL
Sbjct: 3 FLIDGVPIYFPYEKIYPEQLKY---IKSLLKSIQTPGH--VLIEMPSGTGKTVALL---- 53
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNK 136
+C + QL H K A G F
Sbjct: 54 ----SCTVSYQL----HMK----------AKGVPF------------------------- 70
Query: 137 NVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAV--------LASRKHYCTNKYVR 188
I Y SRT +I + + E + + V L+ R + C NK
Sbjct: 71 --------KIVYCSRTLPEIDKALKELRSLVEYIKKHVSFDFLGVGLSKRGNMCINKEAL 122
Query: 189 DKENIDEECKLLLGD-RNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGC 247
+++ C+ + N+ C ++N K P + V+D ++ +G + C
Sbjct: 123 GSFDVEITCRKMTNHFENMKCDFYEN--KATSIP-------YGVYDFTEIKELGAKMGVC 173
Query: 248 SYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVD 306
Y+ R+ + PY+Y+I P I + ++ K + ++ DEAHNI+ +A S++
Sbjct: 174 PYFFVRNHLPLFDCIIYPYNYLIEPSIFSIISKELPKDSFVVFDEAHNIDSHCIEALSIE 233
Query: 307 IDEDVLLKLQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSC--WT 364
I + LE + +I + Q+ I+RR ++E++ F +T
Sbjct: 234 ISRNT-------LEAASRIMSVIESKIKSKKQE----IDRR----LRKEYELMFKTMEYT 278
Query: 365 GDKAL--------RELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVITLEG 416
G+ + EL N+ + K + E T+ + HL+ S+ +
Sbjct: 279 GENTIPHFFNTNKPELAPGNLRNASHFV---SVMKRLIEFLKTKLKTTHLTVESIKSFIQ 335
Query: 417 LFSSLTYFFSRNGSHVSD----------------YQL--------ALQKYIKRDS----- 447
LT+ + S VS Y+L L Y K S
Sbjct: 336 SIKELTFIDKKTLSFVSQRMGIMVQSLGVEDDELYKLLSIANFGTMLSIYSKGFSVIFEP 395
Query: 448 -KNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELG------VQF 500
G + L L CL+ ++ V + ++I+TSGTLSP+ + L V+
Sbjct: 396 YDTMSGVFNPVLRLSCLDASIAMSHVFKNFRNVIITSGTLSPIEMYPKILNFVPSSIVEI 455
Query: 501 GTCL----EAPHVIDV-DLQVLTSVISTGPDNYPL----NASYKTADG------------ 539
G L +P +I D Q+L ++ D Y + +S ADG
Sbjct: 456 GITLCRNSTSPLIITKGDDQMLLK--NSKDDEYEMLEMQKSSMSQADGKITTSFALRADP 513
Query: 540 ---------------------------YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGG 572
Y ME++ W E+ + K +F+E
Sbjct: 514 SVVRNYGNLITSLSKIVPDNIVVFFPSYIYMEEVITLWSESNVMEEILQSKLVFIETPDF 573
Query: 573 SQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRG 632
+ E L++Y + G + R K D R
Sbjct: 574 RET--ETALRNYRKACDMGRGAVLFSVARGKVSEGVDFEH---------------GYGRA 616
Query: 633 KIVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFD 692
+++G+PF +++ + KY K E+ A R Q +GR +R++ D
Sbjct: 617 VVMLGVPFMYTESVRLKERLKYMRQEHGIKEY----EFLVFDAMRHAAQCLGRVLRNKTD 672
Query: 693 YGAIILLDERFQEERNRAHISKWLRKSIKQYD---SFDASLEGLKSFFRDVKGWVGKKMF 749
YG +I+ D+RF + + + KW+++ I++ + S D +L K F++++ V
Sbjct: 673 YGLMIMADQRFGAQSKISKMPKWIQERIEKGNCGLSIDMALSIAKMFYKEMAQPVSGDGV 732
Query: 750 NGLENSDNDV 759
L+ D DV
Sbjct: 733 ALLDEKDIDV 742
>gi|410907467|ref|XP_003967213.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8-like [Takifugu rubripes]
Length = 979
Score = 102 bits (253), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 133/335 (39%), Gaps = 76/335 (22%)
Query: 457 TLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLE------APHVI 510
++ LNPAV F + + ++++ GT+ P++ F EL G E HVI
Sbjct: 667 SVKFLLLNPAVHFAQILKECRAVVIAGGTMQPVSDFKQELLFSAGVGEERIVEFSCGHVI 726
Query: 511 DVDLQVLTSVISTGPDNYPLNASYKTAD----------------------------GYKL 542
+ +L V+ GP L+ +++ D Y+
Sbjct: 727 PPE-NILPLVLCNGPSGQELDFTFQNRDSPHMMDETGRILSNICNVVPGGVVCFFPSYEY 785
Query: 543 MEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRV 602
+ ++ + W G +RL KK +F EPK + E VLK + I +CA
Sbjct: 786 LRRITSHWETNGTLARLANKKKIFHEPKKSNL--VEQVLKDFSRCI---QRCAA------ 834
Query: 603 KREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQ 647
++ GA +V GK ++VG+P+PNI +
Sbjct: 835 --------------DSGALTGALLFSVVGGKMSEGINFSDDLGRCVVMVGMPYPNIKSPE 880
Query: 648 VSLKKKYNDTYRSSKNLLS-GNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEE 706
+ K Y D + S G N +A+NQ+IGR IRHR DY +++L D R+
Sbjct: 881 LQEKMSYLDKHLPHNGGKSPGQALIENLCMKAVNQSIGRAIRHRGDYSSMVLCDRRYSRP 940
Query: 707 RNRAHISKWLRKSIKQYDSFDASLEGLKSFFRDVK 741
A + W+R + SF + L+ FF + K
Sbjct: 941 ATLAKLPAWIRDRTSTHTSFGPAFATLRKFFHERK 975
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 90/170 (52%), Gaps = 18/170 (10%)
Query: 146 IFYASRTHSQISQVISEYKKTAYR--VPMAVLASRKHYCTNKYVR---DKENIDEECKLL 200
I+Y SRTHSQ++Q + E +K+ + + + L SR++ C N+ VR ++I++ C +
Sbjct: 298 IYYCSRTHSQLAQFVHEVQKSPFANDISLVTLGSRQNLCINEEVRRLGSIQHINDRCMEM 357
Query: 201 LGDRNLGCPQFKNVHKVRG----------HPSLQKGG---CHEVHDIEDLVNVGQVVRGC 247
+++ Q + RG P+LQ+ V DIE L+ +G R C
Sbjct: 358 QKNKHEKQHQEDGAKRKRGPAKSTCPYNKAPALQRMRDEILGAVQDIEQLLKLGSETRSC 417
Query: 248 SYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIED 297
YY+AR AQLV PY +++ R A V +KG ++I+DEAHN+ D
Sbjct: 418 PYYSARLTIPPAQLVVLPYQMLLHEATRRAAGVQLKGQVVIIDEAHNLSD 467
Score = 60.8 bits (146), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 36/59 (61%), Gaps = 5/59 (8%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
+G Q FPYQPY Q FM + S LD+ + + ESPTGTGKSLSL+C L+W
Sbjct: 92 IGRTQFPFPYQPYDIQQQFMQALYSALDQGKV-----GIFESPTGTGKSLSLICGALSW 145
>gi|346326897|gb|EGX96493.1| DNA helicase, putative [Cordyceps militaris CM01]
Length = 774
Score = 102 bits (253), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 150/356 (42%), Gaps = 83/356 (23%)
Query: 448 KNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFG----TC 503
K PG LS L+P F +A + ++IL GT+SP + + L T
Sbjct: 438 KLPGAQSDVQLSYLLLSPTYAFSSIASSARAVILAGGTMSPFDDYKDHLFPMLDESKITT 497
Query: 504 LEAPHVI---DVDLQVLTSVISTGPDNYPLNASYK---------------------TADG 539
L HVI ++ ++ L + + GP P SY+ DG
Sbjct: 498 LSCGHVIPSTNLCVRTLAASRAGGP---PFEFSYQRRGDQEMIGQLGLAILNMCSVVPDG 554
Query: 540 -------YKLMEKLCNRWR------ETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYN 586
Y ++++ W+ W RL +KK +F E KG S ++ VL+ Y
Sbjct: 555 VVIFFPSYGYLDEVVQVWKTKRAGDAQSTWERLKSKKTIFQETKGASSDE---VLQKYSE 611
Query: 587 SI--SQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFL-AVCRGKIVVGIPFPNI 643
+I +Q A++ L+ + + + +G +F + R VVG+P+PNI
Sbjct: 612 AIFGAQAGGGALL------------LSVVGGKMS---EGINFSDRLGRLVAVVGLPYPNI 656
Query: 644 NDIQVSLKKKYNDTYRSSKNLLSGN---------------EWYCNQAFRALNQAIGRCIR 688
K +Y ++ ++ L G ++Y N RA+NQ+IGR IR
Sbjct: 657 ASPDWKAKMEYIESSTRTRLLERGGIPPAEATSRAKQTARDFYENSCMRAVNQSIGRAIR 716
Query: 689 HRFDYGAIILLDERFQEERNRAHISKWLRKSIK---QYDSFDASLEGLKSFFRDVK 741
H+ DY AI+LLD R+ ER R+ + W++ ++ Q + L SFFR K
Sbjct: 717 HKGDYAAIVLLDRRYTSERIRSKLPGWIQGGLQVDVQEKGLGGVMGALGSFFRGKK 772
Score = 82.8 bits (203), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 90/184 (48%), Gaps = 22/184 (11%)
Query: 146 IFYASRTHSQISQVISEYKKTAY------------------RVPMAVLASRKHYCTNKYV 187
I+Y SRTHSQ+SQ I+E ++ + V + L+SR+ C N V
Sbjct: 116 IYYTSRTHSQLSQFIAELRRPTFPASLPQDLSGSGAKTQDELVKLLPLSSRQKLCINPSV 175
Query: 188 ---RDKENIDEECKLLLGDRNLGCPQFKNVHKVRGHP-SLQKGGCHEVHDIEDLVNVGQV 243
+ + I++ C L ++ +F ++ + V DIEDL +G+
Sbjct: 176 SRLKTVQAINDRCAELQQPKSGRKCEFVPREELLAQTHEFRDTALATVPDIEDLYQLGKA 235
Query: 244 VRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAG 303
+R C YYA+R+ A++V PY ++ R A+ + ++G ++I+DEAHNI D +
Sbjct: 236 LRVCPYYASRTALPGAEIVTLPYPLLLQKSARDALGIKLEGNVVIVDEAHNIMDAVSNVY 295
Query: 304 SVDI 307
+ D+
Sbjct: 296 AADL 299
>gi|427782715|gb|JAA56809.1| Putative excision repair cross-complementing rodent repair
deficiency complementation group 2 [Rhipicephalus
pulchellus]
Length = 718
Score = 102 bits (253), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 148/731 (20%), Positives = 280/731 (38%), Gaps = 162/731 (22%)
Query: 122 PSTNGQTA---QVAMNNKNVKKKMTPTIFYASRTHSQISQVISEYKKTA--YRVPMA--- 173
PS G+T + + + M + Y SRT +I +V+ E ++ Y+
Sbjct: 2 PSGTGKTVTLLSLILAYQKANPAMISKLLYCSRTLPEIEKVVEELRRLLEHYKRETGEDM 61
Query: 174 -----VLASRKHYCTNKYV---RDKENIDEECKLLLGDRNLG---------CPQFKNVHK 216
L SRK+ C + V RD +D C L C F+N
Sbjct: 62 DLLGLCLTSRKNLCIHPQVSLERDGRVVDGRCFSLTASYRRAQATDPETQCCTFFENFDS 121
Query: 217 VRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRG 276
L G ++ ++DL G+ + C Y+ AR +A++V Y Y+++P I
Sbjct: 122 QGRDIPLPTG----IYSVDDLKEYGRERQLCPYFVARQAVLNAKVVVYSYHYLLDPKIAE 177
Query: 277 AMEVDI-KGAILILDEAHNIEDIARDAGSV----------------------DIDEDVLL 313
+ ++ + A++I DEAHNI+++ ++ SV ++ E
Sbjct: 178 VVSKEMSRNAVVIFDEAHNIDNVCIESMSVRLTKRTIEGSMENIDNLDHTIKELKEQDAE 237
Query: 314 KLQMELEQVCS---------------VNPMIYQPLIE--------MTQDLVGWIERRKAT 350
KL+ E EQ+ NP++ ++E + + V ++ R
Sbjct: 238 KLRTEYEQLLEGLRQAKEAREADLILANPVLPDEVLEEAVPGNIRLAEHFVSFLRRLVEY 297
Query: 351 LAKR-EFQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGM 409
+ R QH LQ+ + R+ L + + ++ T E+P +
Sbjct: 298 VKMRMRAQHMVQESPAAFLKDILQKVCLERKP----LRFSAERLRSLLRT-LEVPDPTNF 352
Query: 410 SVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVF 469
S + L +F S ++ + + ++ Y D ++PG ++L C++ ++
Sbjct: 353 SPLV------RLCHFASLVSTYTKGFTIIVEPY---DERSPGVP-NPVINLSCMDASLSI 402
Query: 470 KDVAELSLSIILTSGTLSPMN------SFSSELGVQFGTCLEAPHVIDVDLQVLTSVIST 523
K V S+I+TSGTLSP+ F + L P + + ++S
Sbjct: 403 KPVFNRFQSVIITSGTLSPVEMYPKILDFRPVVSASLSITLARPSICPL-------IVSK 455
Query: 524 GPDNYPLNASYKT---------------------ADG-------YKLMEKLCNRWRETGQ 555
G D L++ ++T DG Y +E + W E G
Sbjct: 456 GSDQVALSSRFETREEVSVVRNYGALLVELASCVPDGLVCFFTSYVYLESVVAAWYEQGV 515
Query: 556 WSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIES 615
+L +K LF+E ++ + L +Y + G ++ R K D +
Sbjct: 516 LDQLQRRKLLFLETPDAAET--ALALANYVKACENGRGAVLLSVARGKVSEGVDFDH--- 570
Query: 616 QENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKY-NDTYRSSKNLLSGNEWYCNQ 674
+ R ++ GIPF + + ++ D ++ + N++
Sbjct: 571 ------------HLGRAVLMFGIPFVYTQSRILRARLEFLRDQFQ-----IRENDFLTFD 613
Query: 675 AFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSF-----DAS 729
A R Q +GR +R + DYG +I D+RF R+ + +W+++ ++ DS + +
Sbjct: 614 AMRHAAQCVGRALRGKTDYGIMIFADKRFSRWDKRSKLPRWIQEHLQ--DSLCNLSTEEA 671
Query: 730 LEGLKSFFRDV 740
L+ +K F R +
Sbjct: 672 LQVVKRFLRQM 682
>gi|164428066|ref|XP_956536.2| DNA repair helicase RAD3 [Neurospora crassa OR74A]
gi|157071997|gb|EAA27300.2| DNA repair helicase RAD3 [Neurospora crassa OR74A]
Length = 796
Score = 102 bits (253), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 144/687 (20%), Positives = 274/687 (39%), Gaps = 126/687 (18%)
Query: 146 IFYASRTHSQISQVISEYKK-TAYRVPMAV---------LASRKHYCTNKYVRDKEN--- 192
+ Y SRT S+I + + E + +R L SRK+ C + V+ +++
Sbjct: 59 LIYCSRTMSEIEKALVELRALMKFRAERLGHEEEFRGLGLTSRKNLCLHPSVKREKSGAI 118
Query: 193 IDEECKLLL----------GDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQ 242
+D C+ L G+ C N+ + H + G + ++ L+ G+
Sbjct: 119 VDARCRSLTAGFVKEKREKGENVETCVYHDNLDLLEPHNLIPNG----IWTLDGLMRYGE 174
Query: 243 VVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARD 301
+ C Y+ AR M ++ Y Y+++P I + D+ K I++ DEAHNI+++ +
Sbjct: 175 EKKQCPYFTARRMMQHCNVIIYSYHYLLDPKIAERVSKDLSKDCIVVFDEAHNIDNVCIE 234
Query: 302 AGSVDIDEDVLLKLQMELEQV-CSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFF 360
+ S DI +D L++ + + ++ M ++ + +E K R+ F
Sbjct: 235 SLSTDITQDSLMRATRGAQNLEAKISEMKDSDQEKLQSEYEKLVEGLKGLDEGRQEDAFM 294
Query: 361 SCWT-GDKALRELQEANISR--------QCFPILLECATKAIKEATDTE-SELPHLSGMS 410
+ T D L+E NI R + F L+ K + ++T S L HL +
Sbjct: 295 ANPTLPDDLLKEAVPGNIRRAEHFVAFLRRFIEYLKTRMKVRQVISETPPSFLAHLKEYT 354
Query: 411 VI-----------------TLEGL-------FSSLTYFFSRNGSHVSDYQLALQKYIKRD 446
I TLE + F + ++ + L L+ Y
Sbjct: 355 FIEKKPLRFCAERLTSLVRTLELTNIEDYRPLQEVATFATLVATYEKGFLLILEPYESDT 414
Query: 447 SKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEA 506
+K P L CL+ A+ K V + S+I+TSGT+SP+ + L F T ++
Sbjct: 415 AKTPNP----VLHFTCLDAAIAIKPVFDRFSSVIITSGTISPLEMYPKMLN--FETVVQE 468
Query: 507 PHVIDVDLQ-VLTSVISTGPDNYPLNASYK---------------------TADG----- 539
+ + + + L +++ G D ++ S++ T DG
Sbjct: 469 SYAMTLARRSFLPMIVTRGSDQASISTSFQVRNEPSVVRNYGNLLTEFARITPDGMVVFF 528
Query: 540 --YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVV 597
Y ME + + W+ G + K + VE + + L+ Y + G ++
Sbjct: 529 PSYLYMESIISMWQGMGILDEVWKHKLILVETPDAQETS--LALETYRTACCNGRGAILL 586
Query: 598 RKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKY-ND 656
R K D + ++ G R + +G+PF + + ++ +
Sbjct: 587 CVARGKVSEGIDFD--------HQYG-------RTVLCIGVPFQYTESRILKARLEFLRE 631
Query: 657 TYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWL 716
TYR + N++ A R Q +GR +R + DYG ++L D RF + RA + KW+
Sbjct: 632 TYR-----IRENDFLSFDAMRHAAQCLGRVLRGKDDYGVMVLADRRFM--KKRAQLPKWI 684
Query: 717 RKSIKQYD---SFDASLEGLKSFFRDV 740
++ + + S D ++ ++F + +
Sbjct: 685 NQAFLEANTNLSTDMAVGNARAFLKQM 711
>gi|356559661|ref|XP_003548117.1| PREDICTED: DNA repair helicase UVH6-like [Glycine max]
Length = 758
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 161/769 (20%), Positives = 297/769 (38%), Gaps = 181/769 (23%)
Query: 122 PSTNGQTAQVA--MNNKNVKKKMTPT-IFYASRTHSQISQVISEYKKT----------AY 168
P+ G+T + + + + K +P + Y +RT ++ + ++E + A
Sbjct: 43 PTGTGKTIALLSLITSYVLSKPHSPLKLLYCTRTVHEMEKTLAELRLLHDYQLRHLGPAA 102
Query: 169 RVPMAVLASRKHYCTNKYVRDKEN---IDEECKLL-------LGDRNLGCP--QFKNVHK 216
++ L+SRK+ C N V EN +D C+ L + N G P +F ++
Sbjct: 103 KILALGLSSRKNLCVNPRVLAAENRDSVDAGCRKLTASWVRAVAAENPGVPTCEFFEQYE 162
Query: 217 VRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRG 276
G ++ G V+ ++DL G+ C YY AR M A +V Y Y+++P + G
Sbjct: 163 RAGSSAVLPPG---VYTLQDLRVYGKEKGWCPYYLARHMVQFANVVVYSYQYLLDPKVAG 219
Query: 277 AMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDV-------LLKLQMELEQVCSVNP- 327
+ ++ K ++++ DEAHNI+++ +A SV + L +++ E+++ + +
Sbjct: 220 IISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTIEGARRNLNRMRQEIDKFKATDAG 279
Query: 328 ---MIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRELQEANISR-QCFP 383
Y L+E L G + A LA D L+E NI R + F
Sbjct: 280 RLRAEYNRLVEGLA-LRGDLPATDAWLANPALP--------DDILKEAVPGNIRRAEHFI 330
Query: 384 ILLECATKAIKEATDTES---ELPHLSGMSVITLEGL----------------------- 417
+L + ++ DTE+ E P +S++ G+
Sbjct: 331 HVLRRLVQYLEGRLDTENVEKESPVSFVVSILNHAGIDQKALKFCYDRLHSLMMTLEITD 390
Query: 418 ------FSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKD 471
++ F + G++ + + ++ + +R P L L C + ++ K
Sbjct: 391 TDEFLHIQTICDFATLVGTYARGFSIIIEPFDERMPHIPDP----VLQLCCHDASLAIKP 446
Query: 472 VAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQ-VLTSVISTGPDNYPL 530
V E S+++TSGTLSP++ + L F + + + + V++ G D P+
Sbjct: 447 VFERFQSVVITSGTLSPIDLYPRLL--NFNPVVSRSFTMSLTRDCICPMVLTRGSDQLPV 504
Query: 531 NASYK---------------------TADG-------YKLMEKLCNRWRETGQWSRLNAK 562
+ + DG Y M+ + N W E G +
Sbjct: 505 STKFDMRSDLGVVRNYGRLLLEMASVVPDGIVCFFVSYSYMDGIVNTWNENGILKEIMQH 564
Query: 563 KPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKK 622
K +F+E +Q+ E L ++ + C +
Sbjct: 565 KLVFIE----TQDVVETTLA--LDNYRKACDCG--------------------------R 592
Query: 623 GASFLAVCRGK---------------IVVGIPFP-NINDIQVSLKKKYNDTYRSSKNLLS 666
GA F +V RGK I+ G+PF ++ I ++ + DT++ +
Sbjct: 593 GAIFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQ-----IK 647
Query: 667 GNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYD-- 724
++ A R Q +GR IR + DYG +I D+R+ R+ + W+ +
Sbjct: 648 EGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPSWILSHLHDAHLN 707
Query: 725 -SFDASLEGLKSFFR------DVKGWVGKKMFNGLENSDNDVDHVSSMD 766
S D +L + F R D G G+K L D + VS +D
Sbjct: 708 LSTDMALHIAREFLRKMAQPYDKTGGTGRKTL--LSQEDLEKMAVSGLD 754
>gi|190347854|gb|EDK40205.2| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 843
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 151/709 (21%), Positives = 279/709 (39%), Gaps = 159/709 (22%)
Query: 146 IFYASRTHSQISQVISE-YKKTAYRVPMAV---------LASRKHYCTNKYV---RDKEN 192
I Y SRT S+I + + E +K YR L SRK+ C + + R
Sbjct: 122 IVYCSRTMSEIEKALIELHKLMEYRAEELGYVEDFRGLGLTSRKNLCIHPTISKERKGNV 181
Query: 193 IDEECKLLLG---------------------DRNLGCPQFKNVHKVRGHPSLQKGGCHEV 231
+DE+C+ + + C +N++ + H + G V
Sbjct: 182 VDEKCRRITNGQLKQKIESGAVSPDLQANNPEAYTLCNYHENMNDMDSHSYVPNG----V 237
Query: 232 HDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILD 290
+ + L+N + + C Y+ R M ++ Y Y+++P I + ++ K +I+I D
Sbjct: 238 YSFDGLINYSKEKQICPYFTVRRMIPFCNIIIYSYHYLLDPKIAERVSKELSKDSIIIFD 297
Query: 291 EAHNIEDIARDAGSVDIDEDVLL----------------------KLQMELEQVCS---- 324
EAHNI+++ ++ S+D+ +D L KLQ E E++
Sbjct: 298 EAHNIDNVCIESLSLDLTDDTLKRATRGANKLGEAVDEMKAQDSEKLQNEYEKLVEGLRD 357
Query: 325 -----------VNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCW--------TG 365
NP + Q L++ + + G I RKA +HF S T
Sbjct: 358 AEIARDEELFMSNPALPQDLLD--EAIPGNI--RKA-------EHFISFLKRFIEYLKTR 406
Query: 366 DKALRELQEANIS-RQCFPILLECATKAIKEATDTESELPHLSGMSVITLEGLFSSLTYF 424
K L + E +S Q L K ++ ++ S L +S I + F
Sbjct: 407 MKVLHVISETPLSFLQHLKDLTFIERKPLRFCSERLSLLVRTLELSEIEDFNALKDIATF 466
Query: 425 FSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSG 484
+ ++ +QL L+ + + P L CL+ ++ K V + S+I+TSG
Sbjct: 467 ATLVSTYDRGFQLILEPFETDGATVPNP----ILHFTCLDASIAMKPVFDRFSSVIITSG 522
Query: 485 TLSPMNSFSSELGVQFGTCLEAPHVIDVDLQ-VLTSVISTGPDNYPLNASYK-------- 535
T+SP++ + L F T ++ + + + + L +++ G D +++ ++
Sbjct: 523 TISPLDMYPRMLN--FQTVIQESYTMTLARRSFLPMIVTKGADQVSISSQFEIRNDPSVV 580
Query: 536 -------------TADG-------YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQE 575
T DG Y ME + + W+ G + K + VE
Sbjct: 581 RNYGSLLIEFSKITPDGMVVFFPSYLYMESIISMWQTMGVLDEVWKHKLILVETPDAQVT 640
Query: 576 DFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIV 635
+ L+ Y + S G ++ R K D + + G R ++
Sbjct: 641 --SLALETYRKACSNGRGAVLLSVARGKVSEGIDFD--------HHYG-------RTVLM 683
Query: 636 VGIPFPNINDIQVSLKKKY-NDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYG 694
+GIPF + + ++ D Y+ + N++ A R Q +GR +R + DYG
Sbjct: 684 IGIPFQYTESRILKARLEFLRDNYQ-----IRENDFLSFDAMRHAAQCLGRVLRGKDDYG 738
Query: 695 AIILLDERFQEERNRAHISKWLRKSIKQYD---SFDASLEGLKSFFRDV 740
++L D RF+ ++N+ + KW+ +++ + D S D +L K F R +
Sbjct: 739 IMVLADRRFRRKKNQ--LPKWIAQALYESDENLSTDMALANAKKFLRSL 785
Score = 45.1 bits (105), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 6/65 (9%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+ + + V FPY + Y Q +M + TLD G+C +LE P+GTGK++SLL T+
Sbjct: 56 FFIDDLPVLFPYPRIYPEQYAYMSDIKKTLDVG---GNC--ILEMPSGTGKTISLLSLTV 110
Query: 77 AWQQN 81
A+Q +
Sbjct: 111 AYQMH 115
>gi|327272138|ref|XP_003220843.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8-like [Anolis carolinensis]
Length = 914
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 137/320 (42%), Gaps = 56/320 (17%)
Query: 457 TLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTC------LEAPHVI 510
+L LNPAV F V + ++I+ GT+ P+ F +L G HVI
Sbjct: 598 SLKFLLLNPAVHFAKVLKECRAVIIAGGTMQPIADFREQLLQSAGASADRIEEFSCGHVI 657
Query: 511 DVDLQVLTSVISTGPDNYPLNASYKTADGYKLMEK-------LCN--------------- 548
D +L ++ +GP N L+ +Y+ ++ME+ LCN
Sbjct: 658 PPD-NILPIILCSGPSNQQLDFTYEKRGLPQMMEETGRILCNLCNIVPGGMVCFFPSYEY 716
Query: 549 ------RWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRV 602
W +TG ++L AKK +F EPK +Q E VL Y +KC KR
Sbjct: 717 EKQVYMHWGKTGLLTQLAAKKKIFQEPKRANQ--VEQVLAEY-------AKCI----KRC 763
Query: 603 KREGNNDLNTIESQENANK--KGASF---LAVCRGKIVVGIPFPNINDIQVSLKKKY-ND 656
+ G + K +G +F L C I+VG+P+PNI ++ K Y N
Sbjct: 764 NQTGGPMTGALLFSVVGGKMSEGINFSDDLGRC--VIMVGMPYPNIKSPELQEKIAYLNK 821
Query: 657 TYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWL 716
T + G N +A+NQ+IGR IRH+ D+ +I+LLD R+ + +W+
Sbjct: 822 TMPKAAGQAPGRMLIDNLCMKAVNQSIGRAIRHQKDFASIVLLDHRYSRPAIFNKLPQWI 881
Query: 717 RKSIKQYDSFDASLEGLKSF 736
+ + F + L+ F
Sbjct: 882 KSQTQVKAGFGPAFAALRKF 901
Score = 86.7 bits (213), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 108/236 (45%), Gaps = 30/236 (12%)
Query: 87 QLANISHSKPDTEAVTDPLANGGG-FIPESQPSTIPPSTNGQTAQVAMNNKNVKKKMTPT 145
QL+ S P +PL G I S + ++ ++ +++++
Sbjct: 169 QLSQDILSSPSESGALEPLDQGEEELILAEYESDDEKKVGNRLSEADDDDDDIEEEHVTK 228
Query: 146 IFYASRTHSQISQVISEYKKTAY--RVPMAVLASRKHYCTNKYVRDKENIDEECKLLLGD 203
I+Y SRTHSQ++Q + E +K+ + + +A L SR++ C N+ VR + L+ D
Sbjct: 229 IYYCSRTHSQLAQFVHEVQKSPFGKEIRLASLGSRQNLCVNEEVRRMGAVQ-----LIND 283
Query: 204 RNLGCPQFKNVHKVRGHPSLQKGG----------------------CHEVHDIEDLVNVG 241
R + + K+ K G + +K +V DIE LV +G
Sbjct: 284 RCMEMQKNKHEKKSTGEETEKKKTRVSRTVCPFYSYEHMQFLRDEVLVQVKDIEQLVTLG 343
Query: 242 QVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIED 297
+ ++ C YY +R AQLV PY +++ R A + +K ++I+DEAHN+ D
Sbjct: 344 KEMKACPYYGSRHAIPAAQLVVLPYQMLLHDATRNASGIKLKDQVVIIDEAHNLID 399
Score = 52.4 bits (124), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 30/52 (57%), Gaps = 5/52 (9%)
Query: 27 FPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
FPY PY Q FM ++ L+ + + ESPTGTGKSLSL+C L W
Sbjct: 15 FPYAPYPIQEEFMAKLYQVLETGK-----IGIFESPTGTGKSLSLICGALTW 61
>gi|303271817|ref|XP_003055270.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463244|gb|EEH60522.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 741
Score = 101 bits (252), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 161/726 (22%), Positives = 282/726 (38%), Gaps = 194/726 (26%)
Query: 146 IFYASRTHSQISQVISEYKKT-AYR--------VPMAV-LASRKHYCTNKYVRD---KEN 192
+ Y +RT ++ +V++E + AYR +A+ L+SRK+ C + V + +E+
Sbjct: 69 LIYCTRTVPEMEKVLAELRVLQAYREKHVGEAAAMLALGLSSRKNMCVHPRVAEEGSRES 128
Query: 193 IDEECKLLLG---------------DRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDL 237
+D C+ L + QF ++ G ++ G V+ + DL
Sbjct: 129 VDARCRQLTASWVREKHNSALASGEEPTTELCQFFEDYEREGPDAVLPPG---VYTLADL 185
Query: 238 VNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIE 296
G+ C Y+ AR M + ++ Y Y+++P + + ++ K +++ DEAHNI+
Sbjct: 186 RQFGRTKGWCPYFTARHMIKCSNVIVYNYQYLLDPKVSSLVSRELEKECVVVFDEAHNID 245
Query: 297 DIARDAGSVDIDEDVLLKLQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKR-- 354
++ +A SV++ + L V N L IER K T +R
Sbjct: 246 NVCIEALSVNLRQQTL--------DVAGRN----------ITALSAKIERAKQTDERRLR 287
Query: 355 -EF---------QHFFSCWTGDKA----------LRELQEANISR-QCFPILLECATKAI 393
E+ Q G+ A LRE NI R + F + + +
Sbjct: 288 AEYDALVNGLANQGVLPRGGGEDAIANPVIPADILREAVPGNIRRAEHFVAFMRRLVEYL 347
Query: 394 KE---ATDTESELP-----HLSGMSVI-----------------TLEGL----FSSLTY- 423
K+ AT E E P HLS + I TLE + F++++
Sbjct: 348 KQRLKATQVEQETPMAFLAHLSQTAAIDGKTLKFCHDRLTSLLKTLEIVDTEEFNAVSLV 407
Query: 424 --FFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIIL 481
F + G++ + L L+ Y +R P L L CL+ ++ V E ++ +
Sbjct: 408 ADFGTLVGTYEKGFALILEPYDERYPNIPDP----VLQLSCLDASLAIAPVFERFDNVFI 463
Query: 482 TSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTAD--- 538
TSGTLSP++ + L C+ P + D + VI+ G D ++ + D
Sbjct: 464 TSGTLSPIDLYPKLLSFNPVACISLPMTLTRDC-LCPIVITRGADQQAVSTKFDMRDDPG 522
Query: 539 -------------------------GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGS 573
Y ME++ ++W ETG + K +F+E +
Sbjct: 523 VIQNYGRILIDMAASVPDGLVAFFVSYSYMEQIVSKWHETGVLQNVMQHKLVFIE----T 578
Query: 574 QEDFE--IVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCR 631
Q+ E + L +Y + + G +GA FL+V R
Sbjct: 579 QDVVETSLALDNYRRACNCG------------------------------RGAVFLSVAR 608
Query: 632 GKIVVGIPFPNINDIQVSLKKKYNDTYRSS-KNLLSGNEWYCNQ----------AFRALN 680
GK+ GI F V + Y Y+ + +L Y + AF A+
Sbjct: 609 GKVAEGIDFDRHYGRAVIM---YGVPYQYTLSRILRARLEYLRETFQIKEADFLAFDAVR 665
Query: 681 QA---IGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYD---SFDASLEGLK 734
QA +GR IR + DYG ++ D+R+ R + W+ +K+ S D ++ +
Sbjct: 666 QAAQCVGRVIRSKADYGLMVFADKRYNSHDKRGKLPGWITTHLKEERLNLSTDMAVHVAR 725
Query: 735 SFFRDV 740
+F R++
Sbjct: 726 TFMREM 731
>gi|330841374|ref|XP_003292674.1| hypothetical protein DICPUDRAFT_50564 [Dictyostelium purpureum]
gi|325077069|gb|EGC30807.1| hypothetical protein DICPUDRAFT_50564 [Dictyostelium purpureum]
Length = 788
Score = 101 bits (252), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 173/813 (21%), Positives = 315/813 (38%), Gaps = 188/813 (23%)
Query: 18 YHVGGIQVEFPYQP-YGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+ + + V FPY Y Q +M + +LD G C +LE P+GTGK++ S L
Sbjct: 3 FFIDDLAVYFPYHYCYPEQYQYMVSLKKSLDEG---GPC--ILEMPSGTGKTV----SLL 53
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNK 136
A + +L N T L +PE + +T + A+ +N +
Sbjct: 54 ALISSYQLVNP--------------TVKLLYCSRTVPEIEQAT-------EEARRVLNYR 92
Query: 137 NVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYV---RDKENI 193
N S+ + A + ++SR++ C + V R+ + +
Sbjct: 93 N-----------------------SQLGEKAPKTLCISMSSRRNLCIHPRVSEEREGKIV 129
Query: 194 DEECKLLLGDRNL------GCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGC 247
D C+ L N C F+N +G L +G V+ +EDL G + C
Sbjct: 130 DSLCRELTSPWNRENPNSERCKFFENFED-KGKEILLEG----VYSLEDLKEYGLKNQMC 184
Query: 248 SYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIK-GAILILDEAHNIEDIARDAGSVD 306
Y+ R + + A +V Y Y+++P I + +I++ DEAHNI+++ +A SV+
Sbjct: 185 PYFLDRHVLNFANIVIFSYQYLLDPKIASLVSSSFATNSIVVFDEAHNIDNVCINALSVN 244
Query: 307 IDEDVLLKLQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTG- 365
+D + L L+ V +N I +++ E+R R Q T
Sbjct: 245 LDNKI---LDASLKNVTKINKQI--------EEIKKVDEKRLKEEYSRLVQGLARSGTNR 293
Query: 366 -----------DKALRELQEANISR-QCFPILLECATKAIK-----EATDTESELPHLSG 408
+ ++E NI + + F L++ +K + +ES + L G
Sbjct: 294 TEEVSADPVLPNDVIQEAVPGNIRKAEHFMSLIKRVIDYLKSRLKSQMVISESPMAFLQG 353
Query: 409 M---SVITLEGL------FSSLTYFFSRNG-------SHVSDYQLALQKY-------IKR 445
+ + IT L SSL N S ++D+ + Y I+
Sbjct: 354 LYHATSITSRTLRFCSARLSSLLRTLKINDINAFSGISLIADFATLVGTYNNGFLIIIEP 413
Query: 446 DSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLE 505
+ + CL+ ++ K + + S+I+TSGTLSP++ ++ L +
Sbjct: 414 YYQRQNNTYDQIFQFCCLDASIGMKPIFDRFRSVIITSGTLSPLDIYTKMLNFR------ 467
Query: 506 APHVID---VDLQ---VLTSVISTGPDNYPLNASYK---------------------TAD 538
P VI+ + L + +++ G D ++ + D
Sbjct: 468 -PKVIEKLSMSLNRNCICPCILTRGSDQISISTKFDVRSDTAVVRNYGSLLVEVSAIVPD 526
Query: 539 G-------YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQG 591
G Y ME++ + W E G + + K +FVE ++ + L++Y + G
Sbjct: 527 GIICFFTSYSYMEQIVSVWNEMGLLNNILTNKLIFVETSDPAES--ALALQNYKKACDSG 584
Query: 592 SKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLK 651
++ R K D + N+ G R I+ GIP+ N + +
Sbjct: 585 RGAVLLSVARGKISEGIDFD--------NQYG-------RCVILYGIPYINTESKVLRAR 629
Query: 652 KKY-NDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRA 710
++ D Y+ + NE+ A R +Q +GR IR + DYG +I D+R+ R
Sbjct: 630 LEFLRDRYQ-----IRENEFLTFDAMRTASQCVGRVIRGKSDYGIMIFADKRYNRLDKRN 684
Query: 711 HISKWLRKSIKQYD---SFDASLEGLKSFFRDV 740
+ +W+ + + S D ++ K F R++
Sbjct: 685 KLPQWILQFCQNQHLNLSTDMAISLSKQFLREM 717
>gi|157871788|ref|XP_001684443.1| helicase-like protein [Leishmania major strain Friedlin]
gi|68127512|emb|CAJ05491.1| helicase-like protein [Leishmania major strain Friedlin]
Length = 1127
Score = 101 bits (252), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 103/382 (26%), Positives = 169/382 (44%), Gaps = 79/382 (20%)
Query: 25 VEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCKL 84
+ P+ PY Q + + + L A A +E PTG GK+++LL S L +QQ K
Sbjct: 39 LALPFTPYPVQQEMIGTIAAVLHSASPHVVPVAAVEVPTGCGKTMALLSSVLRYQQELKR 98
Query: 85 KN---------QLANISHSK---------PDTE------------AVTDPLANGGGFIPE 114
K+ Q + H + P E A P+A GG E
Sbjct: 99 KSPKELDAYLRQRRPLWHQRRPSGAKRKAPPKERGCQRGPQQRGAARLAPVAGGGIDTDE 158
Query: 115 SQPS-------TIPPS------TNGQTAQVA----MNNKNVKKKMTP---TIFYASRTHS 154
++PPS N A ++ ++++ P T++Y +RTH+
Sbjct: 159 GDTDDECADGWSVPPSFFRHFRVNSHRKIRAELDVAGSQELRRRFLPPPCTVYYVTRTHA 218
Query: 155 QISQVISEYKK---TAYRVPMAVLASRKHYCTN-KYVRDKEN---------IDEECKLLL 201
Q+ Q + E ++ + M +L SR+ YC + K + K N + E C L+
Sbjct: 219 QLRQAVRELRRLHGATSSIRMNILGSRERYCIHPKVIASKANHTLPVQGNNLGEVCDKLV 278
Query: 202 GDRNLGCPQFKNVH------KVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSM 255
+LG + + + + G Q+G ++ D+EDLV G C YYAAR +
Sbjct: 279 ---SLGLCEMVDKYDELSCSAIAGPVGHQRG---QIWDMEDLVLEGTSRHMCPYYAARDL 332
Query: 256 ADDAQLVFCPYSYIINPVIR--GAMEVDIK-GAILILDEAHNIEDIARDAGSVDIDEDVL 312
A + FC Y Y+++P+IR ME +K A+++ DEAHN+ + +DA S++ DVL
Sbjct: 333 VFYADVNFCTYPYLLDPLIRHETKMEAALKNNAVVVFDEAHNVAAVCQDALSLECPRDVL 392
Query: 313 LKLQMELEQVCSVN-PMIYQPL 333
+ EL+ + S P+ QP+
Sbjct: 393 ALILSELQPLVSNQVPLARQPV 414
Score = 98.6 bits (244), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 94/389 (24%), Positives = 152/389 (39%), Gaps = 96/389 (24%)
Query: 457 TLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQ--FGTCLEAPHVI---D 511
T+ L CL+ ++ F + + ++L SGTLSP + +LGV+ +E HV+
Sbjct: 646 TIGLQCLDGSLAFSHLLKTVHRVVLASGTLSPFPQLARDLGVEASLWRTVEGLHVVPPTQ 705
Query: 512 VDLQVLTSV----------ISTGPDNYPLNASYKT------------------------- 536
L LT++ +T P PL +Y +
Sbjct: 706 YSLTALTALPVSSSSTHNGTTTQPSLLPLRCTYASLSNPVFLKTVARAVVQLTQTLRESS 765
Query: 537 -------ADGYKLMEKLCNRWRET-------GQWSRLNAKKP--LFVEPKGGSQEDFEIV 580
Y ++ L RE Q L+ P LF+EP+ E V
Sbjct: 766 GGGVLLFVPNYAVLTALAKLTREVLLVAQREQQHQSLHVAAPTQLFLEPR--KAEALTEV 823
Query: 581 LKHYYNSISQGSKCAVVRKKRVKR-EGNNDLNTIESQENANKKGASFLAVCRGKIVVGIP 639
L + N +Q +C V R + + LN + L +C +G+P
Sbjct: 824 LCQFQN-CTQAPRCGTALLFSVYRGKASEGLNFTDDMAR--------LVLC-----LGLP 869
Query: 640 FPNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILL 699
+ +V ++ Y SG +WY A RA+NQA+GRC+RH DYGA++LL
Sbjct: 870 LQPLKSWKVIAQRAY-----------SGPDWYTTDAVRAVNQALGRCLRHVKDYGAVVLL 918
Query: 700 DERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFRDVKGWVGKKMFNGLENSDNDV 759
DER+ + + +SKW R +++ S GL++ F W ++ F L S + +
Sbjct: 919 DERYAQPEYQERLSKWCRATLQTESSLPQLCAGLRTSFTQ---W--RRAFGALAMSPSPL 973
Query: 760 -------DHVSSMDQCKEVTKQNTQELNK 781
D D + V Q+ L +
Sbjct: 974 PTPSAAADRAVHRDDMEGVAHQDAASLAR 1002
>gi|242089495|ref|XP_002440580.1| hypothetical protein SORBIDRAFT_09g003450 [Sorghum bicolor]
gi|241945865|gb|EES19010.1| hypothetical protein SORBIDRAFT_09g003450 [Sorghum bicolor]
Length = 758
Score = 101 bits (252), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 183/850 (21%), Positives = 313/850 (36%), Gaps = 212/850 (24%)
Query: 18 YHVGGIQVEFPYQP-YGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+ + G+ V FPY Y Q +M L RA D HALLE PTGTGK+ +L+
Sbjct: 3 FDLDGLPVHFPYAAIYPEQHAYM----GELKRAL-DARGHALLEMPTGTGKTAALISLIT 57
Query: 77 AWQ-QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNN 135
++ N +L + + + E L +P PP+ A +
Sbjct: 58 SYSLANPSRPLRLIYCTRTVHEMEKTLAELRLLFAHLP-------PPAARSLLALGLSSR 110
Query: 136 KNVKKKMTPTIFYASRTHSQISQVIS-EYKKTAYRVPMAVLASRKHYCTNKYVRDKENID 194
KN+ H Q S + + TA R T +VR+K D
Sbjct: 111 KNLC------------VHPQASAAAARDSVDTACR-----------RLTASWVREKAASD 147
Query: 195 EECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARS 254
E L C ++ + L V+ + DL +G+ R C Y+ AR
Sbjct: 148 PESTPL-------CEFYETFDRAAAAGDLASFMPPGVYTLADLRALGRERRVCPYFLARQ 200
Query: 255 MADDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLL 313
M A +V Y Y+++P + + ++ K +++ DEAHNI+++ +A SV I + L
Sbjct: 201 MVKYANVVVYSYQYLLDPKVASIVSREMQKECVVVFDEAHNIDNVCIEALSVSIRKQTLE 260
Query: 314 KLQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKAT---------------LAKREFQH 358
+ L ++ +Q+ I+R KAT LA+R
Sbjct: 261 GAERNLRRI--------------SQE----IDRFKATDANRLRAEYNRLVDGLAQRGNLP 302
Query: 359 FFSCWTGDKALRE--LQEA---NISR-QCFPILLECATKAIK---EATDTESELPHLSGM 409
W + AL + L+EA NI R + F +L + + E + E+E+P
Sbjct: 303 ISDAWLANPALPDDILKEAVPGNIRRAEHFLAVLRRLVRFLDGRLETENVENEMPVSFVA 362
Query: 410 SVITLEGL-----------------------------FSSLTYFFSRNGSHVSDYQLALQ 440
S+ + G+ ++ F + G++ + + ++
Sbjct: 363 SIHSQAGIDQKMLRFCYDRLHSLMMTLEITDTDEFMHIQTICDFATLIGTYTRGFSIIIE 422
Query: 441 KYIKR--DSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGV 498
Y +R D ++P + L C + ++ + V + ++++TSGTLSP++ + L
Sbjct: 423 PYDERMPDIRDP------VIQLSCHDASLAIRPVFDRFETVVITSGTLSPIDLYPRLL-- 474
Query: 499 QFGTCLEAPHVIDVDLQ-VLTSVISTGPDNYPLNASY---------------------KT 536
F + + + + V++ G D P++ +
Sbjct: 475 NFNPVISRSFTMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVVRNYGRLLLEMASAV 534
Query: 537 ADG-------YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSIS 589
DG Y M+ + N W E G + K +F+E + + L +Y +
Sbjct: 535 PDGIVCFFVSYSYMDGIVNSWHEMGILQDIMQHKLVFIETPDVVET--TLALDNYRKACD 592
Query: 590 QGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFP-NINDIQV 648
G +GA F +V RGK+ GI F + + +
Sbjct: 593 CG------------------------------RGAIFFSVARGKVAEGIDFDRHYGRLVI 622
Query: 649 SLKKKYNDTYRSSKNLLSGNEWYCNQ---------AFRALNQA---IGRCIRHRFDYGAI 696
+ Y S+ LL+ E+ F AL QA +GR IR + DYG +
Sbjct: 623 MFGVPFQ--YTLSRILLARLEYLRETFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMM 680
Query: 697 ILLDERFQEERNRAHISKWLRKSIKQYD---SFDASLEGLKSFFR------DVKGWVGKK 747
I D+R+ R+ + W+ + S D +L + F R D G GKK
Sbjct: 681 IFADKRYSRHDKRSKLPGWILSHLHDAHLNLSTDMALHIAREFLRRMAQPYDKTGSGGKK 740
Query: 748 MFNGLENSDN 757
E+ N
Sbjct: 741 TLLTEEDLQN 750
>gi|320166669|gb|EFW43568.1| nucleotide excision repair protein [Capsaspora owczarzaki ATCC
30864]
Length = 747
Score = 101 bits (252), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 160/730 (21%), Positives = 278/730 (38%), Gaps = 160/730 (21%)
Query: 122 PSTNGQTAQV---AMNNKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAV---- 174
PS G+T + ++++ V +M I Y SRT +I +V+ E K +
Sbjct: 19 PSGTGKTISLLSLIISHQMVNPQMGKLI-YCSRTVPEIEKVLDEMTKLVAYIESETGQRL 77
Query: 175 ------LASRKHYCTNKYV---RDKENIDEECKLLLG---------DRNLGCPQFKNVHK 216
L++RK+ C + V RD + +D +C+ L + + F
Sbjct: 78 KFLGLGLSARKNMCIHPEVSKERDGKLVDSKCRELTASWVRTRAENNSEVELCSFYEEFD 137
Query: 217 VRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRG 276
G +L G V+ +++L GQ C YY AR M A ++ Y Y+++P I
Sbjct: 138 RSGREALLPAG---VYTLDELRAFGQRQNWCPYYLARHMISFANVIVYSYHYLLDPKIAN 194
Query: 277 AMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQVCSVNPMIYQPLIE 335
+ ++ K ++++ DEAHNI+++ ++ SV+I + L L + S I Q
Sbjct: 195 LVSKELAKESVVVFDEAHNIDNVCIESMSVEITKRTLDNSTRNLNALASTISEIKQTDTA 254
Query: 336 MTQD----LVGWIERRKATLAKREFQHFFSCWTGDKALRELQEANISR-QCFPILLECAT 390
QD LV + R+A A+ + D+ ++E I R + F L
Sbjct: 255 RLQDEYTRLVQGL--REANTARETDLVLANPVLPDEIMQEAVPGTIRRAEHFVAFLRRFV 312
Query: 391 KAIKE--------ATDTESELPHLS-----------------GMSVITLE----GLFSSL 421
+ +K A + S L L G V TLE FS+L
Sbjct: 313 EYLKNRLRVQHVVAENPTSFLQDLYQAVQIDRKPLRFCAERLGSLVRTLELPNMDDFSAL 372
Query: 422 TY---FFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLS 478
F + ++ + L ++ + R P L C++ ++ K + + +
Sbjct: 373 VTVANFATLVSTYAKGFSLIIEPFDDRTPTIPNP----VLYFSCMDASLAIKPIFDRFQT 428
Query: 479 IILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTAD 538
+++TSGTLSP+ + L Q T + + V +++ G D +++ ++ D
Sbjct: 429 VVITSGTLSPIEMYPKILNFQPVTAQSFTMTLSRNC-VCPVIVTRGSDQVAVSSRFQVRD 487
Query: 539 ----------------------------GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPK 570
Y ME + +W E G + L K +F+E +
Sbjct: 488 DPAVVRNYGSLLVDLSAVVPDGLVCFFPSYTYMESIVAKWHEQGVLTNLLRNKLVFIETQ 547
Query: 571 GGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVC 630
G++ I L +Y + G +GA L+V
Sbjct: 548 DGAET--SIALDNYQKACENG------------------------------RGAVLLSVA 575
Query: 631 RGKIVVGIPF-------------PNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFR 677
RGK+ GI F P + L+ + D R + G+ + A R
Sbjct: 576 RGKVSEGIDFDHHYGRAVILFGIPYVYTESRILRARL-DYLREQFQIREGD-FLTFDALR 633
Query: 678 ALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYD-------SFDASL 730
Q +GR IR + DYG +I D+RF + + KW I+QY S D ++
Sbjct: 634 HGAQCVGRAIRGKSDYGMMIFADKRFARLDKKGKLPKW----IQQYMTDDLCNLSVDEAV 689
Query: 731 EGLKSFFRDV 740
+ K F R++
Sbjct: 690 QVAKRFLRNM 699
>gi|126140148|ref|XP_001386596.1| DNA helicase component of transcription factor b [Scheffersomyces
stipitis CBS 6054]
gi|126093880|gb|ABN68567.1| DNA helicase component of transcription factor b [Scheffersomyces
stipitis CBS 6054]
Length = 793
Score = 101 bits (251), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 160/747 (21%), Positives = 290/747 (38%), Gaps = 185/747 (24%)
Query: 122 PSTNGQTAQVAMNNKNVKKKMT----PTIFYASRTHSQISQVISEYKKTAYRVPMAV--- 174
PS G+T V++ + V +M I Y SRT S+I + + E K +
Sbjct: 43 PSGTGKT--VSLLSLTVAYQMHYPEHRKIVYCSRTMSEIEKALIELHKLMEFRSTELGYV 100
Query: 175 -------LASRKHYCTNKYV---RDKENIDEECKLL----LGDR---------------- 204
L SRK+ C + + R +DE+C+ + L +R
Sbjct: 101 EEFRGLGLTSRKNLCVHPTISQERKGNVVDEKCRRITNGQLKERIAKGLVTPDQEVNHAE 160
Query: 205 -NLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVF 263
N C +N++ + H + G V+ + L+ + C Y+ R M ++
Sbjct: 161 ANTLCDMHENMNDMDQHNLIPAG----VYSFDALIKYCKQEGTCPYFTVRRMIPFCNIII 216
Query: 264 CPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLL--------- 313
Y Y+++P I + ++ K +I+I DEAHNI+++ ++ S+D+ +D L
Sbjct: 217 YSYHYLLDPKIAERVSKELSKDSIIIFDEAHNIDNVCIESLSLDLTDDTLKRATRGANKL 276
Query: 314 -------------KLQMELEQVCS---------------VNPMIYQPLIEMTQDLVGWIE 345
KLQ E E++ NP + Q L++ + + G I
Sbjct: 277 GDAVDEMKAHDSEKLQNEYEKLVEGLRQAEIARDEELFMSNPTLPQDLLD--EAIPGNI- 333
Query: 346 RRKATLAKREFQHFFSCW--------TGDKALRELQEANIS-RQCFPILLECATKAIKEA 396
RKA +HF S T K L + E IS Q L K ++
Sbjct: 334 -RKA-------EHFISFLKRFIEYLKTRMKVLHVISETPISFLQHLKELTFIDRKPLRFC 385
Query: 397 TDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTH 456
++ S L +S I + F + ++ + +QL L+ + S P
Sbjct: 386 SERLSLLVRTLELSEIEDFHALKDIATFATLVSTYDTGFQLILEPFESEGSTVPNP---- 441
Query: 457 TLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQ- 515
L CL+ ++ K V E S+I+TSGT+SP++ + + F T ++ + + + +
Sbjct: 442 ILHFICLDASIAIKPVFERFSSVIITSGTISPLDMYPKMMN--FQTVIQESYTMTLARRS 499
Query: 516 VLTSVISTGPDNYPLNASYK---------------------TADG-------YKLMEKLC 547
L +++ G D +++ ++ T DG Y ME +
Sbjct: 500 FLPMIVTKGSDQVSISSRFEIRNDPSVVRNYGSLLIEFSKITPDGMVVFFPSYLYMESII 559
Query: 548 NRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGN 607
+ W+ G + K + VE + + L+ Y + S G
Sbjct: 560 SMWQTMGVLDEVWKYKLILVETPDAQETS--LALETYRKACSNG---------------- 601
Query: 608 NDLNTIESQENANKKGASFLAVCRGKIVVGIPFPN---INDIQVSLKKKYNDTYRSSKNL 664
+GA L+V RGK+ GI F + + + + +Y ++ L
Sbjct: 602 --------------RGAVLLSVARGKVSEGIDFDHHYGRTVLMIGIPFQYTESRILKARL 647
Query: 665 --------LSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWL 716
+ N++ A R Q +GR +R + DYG ++L D RF +++N+ + KW+
Sbjct: 648 EFMRDHFQIRENDFLSFDAMRHAAQCLGRVLRGKDDYGIMVLADRRFSKKKNQ--LPKWI 705
Query: 717 RKSIKQYD---SFDASLEGLKSFFRDV 740
+++ D S D +L + F R +
Sbjct: 706 AQALNDSDTNLSTDMALATARKFLRSL 732
Score = 48.5 bits (114), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 46/83 (55%), Gaps = 6/83 (7%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+ + + V FPY + Y Q +MC + TLD G+C +LE P+GTGK++SLL T+
Sbjct: 3 FFIDDLPVLFPYPRIYPEQYAYMCDIKKTLDVG---GNC--ILEMPSGTGKTVSLLSLTV 57
Query: 77 AWQQNCKLKNQLANISHSKPDTE 99
A+Q + ++ S + + E
Sbjct: 58 AYQMHYPEHRKIVYCSRTMSEIE 80
>gi|50293497|ref|XP_449160.1| hypothetical protein [Candida glabrata CBS 138]
gi|74637307|sp|Q6FKT4.1|CHL1_CANGA RecName: Full=ATP-dependent RNA helicase CHL1; AltName:
Full=Chromosome loss protein 1
gi|49528473|emb|CAG62130.1| unnamed protein product [Candida glabrata]
Length = 830
Score = 101 bits (251), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 93/179 (51%), Gaps = 18/179 (10%)
Query: 146 IFYASRTHSQISQVISEYKKTAY-----------RVPMAVLASRKHYCTNKYVRD---KE 191
IF++SRTHSQ++Q + K T + RV L S+K C N V+ E
Sbjct: 213 IFFSSRTHSQLNQFAEQLKLTNFPSSFPDKVAHERVKYMPLGSKKQLCINPDVKKWKTLE 272
Query: 192 NIDEECKLLLGDRNLGCPQFKNV---HKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCS 248
I++ C + + GCP ++N H + + ++HDIED+ VG+ + C
Sbjct: 273 GINDACSEVRRSKE-GCPFYQNTPKWHNSKETNHFRDQVFSDIHDIEDIAKVGESLAVCP 331
Query: 249 YYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDI 307
YYAAR +++V PY Y+++ R + +D+KG+I+++DEAHN+ D S +I
Sbjct: 332 YYAARDFIPSSEIVTLPYQYLLSESTRSQLRLDLKGSIVVIDEAHNLVDTINSIHSAEI 390
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/331 (20%), Positives = 136/331 (41%), Gaps = 78/331 (23%)
Query: 457 TLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSEL-------------------- 496
+L L P+ +F+D+ + + +IL GT+ P++ L
Sbjct: 528 SLRYMLLEPSRIFQDIIDSARCVILAGGTMEPVSQLLQYLVPKLDDSSITKFSCNHVIPD 587
Query: 497 ---------GVQFGTCLEAP--------HVIDVDLQVLTSVISTGP--DNYPLNASYKTA 537
QF E H+ + L++ T++ TG +P
Sbjct: 588 SHLRTYIVNEPQFEFTFEKRNSVNLVQNHLFNFYLELSTTIPKTGGIIGFFP-------- 639
Query: 538 DGYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSI--SQGSKCA 595
YK ++++ WR+ G + +L+ ++ +F E K G L Y +++ S+G+
Sbjct: 640 -SYKYLDEIIVSWRKAGLFEKLDKERKVFYEMKDGPDP-----LPDYTSAVANSEGAILF 693
Query: 596 VVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKY- 654
+ ++ E N G +CR ++ G+P+PN+ ++ + +K+
Sbjct: 694 AIVGGKL-------------SEGINFGGN----LCRAIVMTGLPYPNVFSGELIISRKHL 736
Query: 655 -----NDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNR 709
N + ++ E++ N +A+NQ++GR IR DY I LLD+R+ +
Sbjct: 737 EEKVLNGGGSKTDANMAAKEFFENICMKAVNQSVGRSIRSINDYSLIYLLDKRYANANIQ 796
Query: 710 AHISKWLRKSIKQYDSFDASLEGLKSFFRDV 740
+ +S+W+R I+ + + K FF +
Sbjct: 797 SKLSQWVRSRIQSVSTVRDVMASSKEFFDQI 827
Score = 53.5 bits (127), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 35/56 (62%), Gaps = 3/56 (5%)
Query: 28 PYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCK 83
PY PY QL M V TL + A++ESPTGTGK+LSL+CSTL W ++ K
Sbjct: 10 PYSPYDIQLDLMQCVYDTLANPVKKV---AIVESPTGTGKTLSLICSTLTWLRDNK 62
>gi|313237854|emb|CBY12985.1| unnamed protein product [Oikopleura dioica]
Length = 479
Score = 100 bits (250), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 121/488 (24%), Positives = 216/488 (44%), Gaps = 55/488 (11%)
Query: 261 LVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELE 320
++ PY+YI + A +++++ IL++DEAHN E + GS I + L +
Sbjct: 6 ILVAPYNYITD---NSASKIELENKILVIDEAHNFEQLLESTGSFSITSN---DLAQSYD 59
Query: 321 QVCSVNPMIY-QPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKA----LRELQEA 375
+V ++ + L + ++ L WI + T+ K E ++ + D + + E+ E
Sbjct: 60 EVSFAEHDVFCKELADRSRSL-RWILKVIDTI-KAELENHANQSESDASYQLKIDEIIEV 117
Query: 376 NISRQCFPILLE---CATKAIKEATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHV 432
+ + F I E + + + S L ++G + L S L +
Sbjct: 118 FVKAEAFFIQSEVWNAVSAELNKYYSKPSTLSRMTGDNFGYFVHLISELEMVRKDDLCEC 177
Query: 433 SDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNS 491
+++ + +K L L+ L P + + + +L +II TSGTLSP+
Sbjct: 178 YGVTISVGRIDDETAK-------MKLKLFNLEPKIGMNKIEKNNLYNIICTSGTLSPVED 230
Query: 492 FSSEL-----GVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTADGYKLMEKL 546
++ L G + L HVID + Q+ + ++ + LN Y + ++
Sbjct: 231 YARLLNLDHNGEREVVLLSNSHVIDKE-QLFVATVANRENIEFLNV-YANREN----RQM 284
Query: 547 CNRWRET-GQWSRLNAKKPLFVEPKGGSQEDFEIVLKH---------YYNSISQGSKCAV 596
+R++ + LF E E K+ Y+ S SQ S
Sbjct: 285 HTAYRQSLADLANCAPAGTLFFHSTYSQMESCETNWKYFLSEFHKKMYFESRSQKSTAMT 344
Query: 597 V---RKKRVKREGNNDLNTIESQENANKKGASFL-AVCRGKIVVGIPFPNINDIQVSLKK 652
V RK+ K G LN + S + + +G +F + R ++ GIP+P ND ++ K+
Sbjct: 345 VESFRKEIAKENGTAILNCVISGKCS--EGVNFTDDLGRLSVICGIPYPPKNDPRIIQKR 402
Query: 653 KYNDTY-RSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEE---RN 708
Y D R+ K +SG +WY A RA++QAIGR IRH++D+G+II +D RF +
Sbjct: 403 AYLDNLVRTKKGSISGAQWYTINASRAVSQAIGRIIRHKYDFGSIIFMDRRFGSDVPHNF 462
Query: 709 RAHISKWL 716
R+++ WL
Sbjct: 463 RSYLPTWL 470
>gi|323456373|gb|EGB12240.1| hypothetical protein AURANDRAFT_61360 [Aureococcus anophagefferens]
Length = 2031
Score = 100 bits (250), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 101/203 (49%), Gaps = 25/203 (12%)
Query: 143 TPT-IFYASRTHSQISQVISEYKKT-AYRVPMAVLASRKHYCTNKYVRDKENIDEEC--- 197
TPT + + +RTH Q+ + EY+++ YR M++ SR+ +C + + N E C
Sbjct: 662 TPTRVVWVARTHDQLQHAVREYERSCPYRPLMSLRLSRERFCLHPDIATAPNKAEACEEA 721
Query: 198 ---------KLLLGDRNLGCPQFKNVHKVRGHPSLQK-------GGCHEVHDIEDLVNVG 241
+ +N GC K+ G+P QK GG V DIED V G
Sbjct: 722 TKIQKNANKRGRFDVKNSGCGHLDTAEKI-GYPQSQKWRPHFRLGGKMNVWDIEDAVKEG 780
Query: 242 QVVRGCSYYAARS-MADDAQLVFCPYSYIINPVIR--GAMEVDIKGAILILDEAHNIEDI 298
Q C ++ A+ + + A L+F Y ++ P+ R G +E + A++++DEAHN+ +
Sbjct: 781 QATHVCPFHMAQDQIQEGASLIFVTYQQLVEPITRRAGGLEQVFEDALVVVDEAHNLPQV 840
Query: 299 ARDAGSVDIDEDVLLKLQMELEQ 321
ARDA S D+ ED L L LE+
Sbjct: 841 ARDAASYDVTEDRLADLVRTLEE 863
Score = 82.0 bits (201), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 25/198 (12%)
Query: 540 YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRK 599
Y+L+E RW ETG +RL A+K + VE + S + F+ ++ Y + + ++
Sbjct: 1273 YRLLELALKRWTETGGLARLRAEKDVHVESRDLSGDSFDAMVAEYRAAAASARGALLLAV 1332
Query: 600 KRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYNDTYR 659
R + + E A+ K + VC +VG+P+P D LK +++ R
Sbjct: 1333 MRGR-----------AAEGADFKDDAARCVC----IVGVPYPPRFDANTRLKIEHDGRDR 1377
Query: 660 SSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKS 719
G WY +A+R +NQA GR IRH D+GA++LLD + +S+W
Sbjct: 1378 -------GETWYRAEAYRNVNQAAGRLIRHAKDFGALVLLDRALTAN---SMMSEWYADR 1427
Query: 720 IKQYDSFDASLEGLKSFF 737
+ L++FF
Sbjct: 1428 LATLGGATELHNRLRAFF 1445
>gi|346976950|gb|EGY20402.1| DNA repair helicase RAD3 [Verticillium dahliae VdLs.17]
Length = 772
Score = 100 bits (250), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 143/666 (21%), Positives = 269/666 (40%), Gaps = 120/666 (18%)
Query: 146 IFYASRTHSQISQVISEYKK-TAYRVPMAVLASRKHYCTNKYVRDKENIDEECKLLLGDR 204
+ Y SRT S+I + ++E ++ YR ++ T +V++K++ E +
Sbjct: 87 LIYCSRTMSEIEKALAELRELMKYRTEQL---GQEEDLTAGFVKEKKDKGENVDV----- 138
Query: 205 NLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFC 264
C N+ + H + G V + L+ G+ + C Y+ +R M ++
Sbjct: 139 ---CVYHDNLDLLEPHNLIPNG----VWTFDGLLRYGEQHKQCPYFTSRRMMQYCNVIIY 191
Query: 265 PYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQVC 323
Y Y+++P I + ++ K I++ DEAHNI+++ ++ S DI ED L K + +
Sbjct: 192 SYHYLLDPKIAERVSRELSKDCIVVFDEAHNIDNVCIESLSTDITEDSLRKAARGAQNLD 251
Query: 324 SVNPMIYQPLIEMTQ-DLVGWIERRKATLAKREFQHFFSCWTGDKALRELQEANISR-QC 381
+ Q E Q + + +E + R+ F + D L E NI R +
Sbjct: 252 RKIAEMKQTDQEQLQNEYLKLVEGLRDAGEARQEDAFMA--NPDDLLNEAVPGNIRRAEH 309
Query: 382 FPILLECATKAIK---EATDTESELP-----HLSGMSVITLEGL------FSSLTYFFSR 427
F L+ + +K + +T SE P HL + I + L +SL +
Sbjct: 310 FVAFLKRFIEYLKTRMKVRNTISETPPSFLAHLKEFTFIEKKPLKFCAERLTSLVR--TL 367
Query: 428 NGSHVSDYQ--------------------LALQKYIKRDSKNPGGNWTHTLSLWCLNPAV 467
+++ DYQ L L+ + ++ P L CL+ A+
Sbjct: 368 ELTNIEDYQPLQEVATFATLVATYEKGFLLILEPFESEAAEVPNP----VLHFTCLDAAI 423
Query: 468 VFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQ-VLTSVISTGPD 526
K V + S+I+TSGT+SP+ + LG F T ++ + + + + L +++ G D
Sbjct: 424 AIKPVFDRFSSVIITSGTISPLEMYPKMLG--FSTVVQESYSMTLARRSFLPMIVTRGSD 481
Query: 527 NYPLNASYK---------------------TADG-------YKLMEKLCNRWRETGQWSR 558
++ S++ T DG Y ME + + W+ G
Sbjct: 482 QASVSTSFQVRNEPSVVRNYGSLLTEFAKITPDGMVVFFPSYLYMESIISMWQGMGILDE 541
Query: 559 LNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQEN 618
+ K + VE + + L+ Y + G ++ R K D +
Sbjct: 542 VWKYKLILVETPDAQETS--LALETYRTACCNGRGAVLLCVARGKVSEGIDFD------- 592
Query: 619 ANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKY-NDTYRSSKNLLSGNEWYCNQAFR 677
++ G R + +G+PF + + ++ +TYR + N++ A R
Sbjct: 593 -HQYG-------RAVLNIGVPFQYTESRILKARLEFLRETYR-----IRENDFLSFDAMR 639
Query: 678 ALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYD---SFDASLEGLK 734
Q +GR +R + DYG ++L D RFQ + R + KW+ + + D S D ++ +
Sbjct: 640 HAAQCLGRVLRGKDDYGVMVLADRRFQ--KKRVQLPKWINQGLLDADTNLSTDMAVSSAR 697
Query: 735 SFFRDV 740
F + +
Sbjct: 698 RFLKQM 703
Score = 42.7 bits (99), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 18/98 (18%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVIS---------------TLDRAQRDGHCHALLES 61
+ + + V FPY + Y Q +MC + S L+ GHC +LE
Sbjct: 3 FFIDDLPVLFPYPRIYPEQYAYMCDLKSRSSMAETSPCQYADTALETLDAGGHC--VLEM 60
Query: 62 PTGTGKSLSLLCSTLAWQQNCKLKNQLANISHSKPDTE 99
P+GTGK++SLL +A+QQ+ +L S + + E
Sbjct: 61 PSGTGKTVSLLSLIVAYQQHYPEHRKLIYCSRTMSEIE 98
>gi|332029639|gb|EGI69528.1| Putative ATP-dependent RNA helicase DDX11-like protein [Acromyrmex
echinatior]
Length = 857
Score = 100 bits (250), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 144/315 (45%), Gaps = 55/315 (17%)
Query: 458 LSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTC------LEAPHVID 511
+ LNPA F D+ + + S++L GT+ PM+ F +L + G HVI
Sbjct: 555 IKFLLLNPAAHFHDIVKDARSVVLAGGTMEPMSEFVDQLFLMAGATSDRIMTFSCDHVIP 614
Query: 512 VDLQVLTSVISTGPDNYPLNASYKTADGYKLMEKL-------CN---------------- 548
+ ++++VI+ GP +Y KL+++L CN
Sbjct: 615 KE-NIISNVITRGPTGIEFEFNYHNRQDTKLLDELGRALLNLCNVVPAGIVVFFPSYNYE 673
Query: 549 -----RWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVK 603
++G S+++ KK ++ EPK SQ + +L Y +SI + +
Sbjct: 674 DTVFKHLDKSGFISKISTKKCIYREPKLASQVN--TILDQYAHSI---------KNPQFP 722
Query: 604 REGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKY-NDTYRSSK 662
G + + + + + L C IVVG+P+PNI ++ K KY N+ +S
Sbjct: 723 CNGALLFSVVGGKLSEGLNFSDDLGRCV--IVVGLPYPNIKSPELQEKMKYLNENVKSD- 779
Query: 663 NLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQ 722
+GN +Y N +A+NQ IGR +RH DY ++LLD+R+ + + +W+++S+
Sbjct: 780 ---AGNSFYENSCMKAVNQCIGRSVRHINDYSTVVLLDKRYCHKVKV--LPQWIQRSVTI 834
Query: 723 YDSFDASLEGLKSFF 737
+SF + + + FF
Sbjct: 835 NNSFGSVVGNIAKFF 849
Score = 94.4 bits (233), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 94/187 (50%), Gaps = 25/187 (13%)
Query: 146 IFYASRTHSQISQVISEYKKTAYRVPMAV--LASRKHYCTNKYVRDKENID---EEC--- 197
IF+ SRTHSQ++Q + E K++ Y ++V L+SR++YC NK V+ ++I+ E C
Sbjct: 192 IFFCSRTHSQLTQFVHELKRSPYSQEISVVPLSSRQNYCINKNVKRLKHINLINETCLQL 251
Query: 198 -----------KLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRG 246
L CP K+ L + DIE++ GQ
Sbjct: 252 QKKKTTVKKEKDLKRSKTTSSCPFIPGDQKL-----LMAEVLTNIQDIEEITQKGQENNT 306
Query: 247 CSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIED-IARDAGSV 305
C YY +R + QL+ PY+ I + R ++E+D+KG ILI+DEAHN+ D I R SV
Sbjct: 307 CPYYGSRKSLQNGQLILVPYNSIFHKNTRASLEIDLKGNILIIDEAHNLLDAIERMHSSV 366
Query: 306 DIDEDVL 312
++L
Sbjct: 367 ITGRNLL 373
Score = 47.4 bits (111), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 30/52 (57%), Gaps = 5/52 (9%)
Query: 27 FPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
FP+ Y Q FM + + L +DG L ESPTGTGKSLSL+C L W
Sbjct: 9 FPFPAYEIQKRFMRELYACL----KDGKL-GLFESPTGTGKSLSLICGALKW 55
>gi|400603430|gb|EJP71028.1| DNA repair helicase [Beauveria bassiana ARSEF 2860]
Length = 868
Score = 100 bits (250), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 150/347 (43%), Gaps = 85/347 (24%)
Query: 458 LSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFG----TCLEAPHVI--- 510
LS L+P F +A + ++IL GT+SP + L T L HVI
Sbjct: 542 LSYLLLSPTYAFSSIASSARAVILAGGTMSPFEDYKDHLFPALDQSKITTLSCGHVIPST 601
Query: 511 DVDLQVLTSVISTGPDNYPLNASYK---------------------TADG-------YKL 542
++ ++ L + + GP P SY+ DG Y
Sbjct: 602 NLCVRTLAASRAGGP---PFEFSYQRRGDEEMIGQLGLAILNMCSIVPDGVVVFFPSYGY 658
Query: 543 MEKLCNRWRET------GQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSI--SQGSKC 594
++++ W++ W RL +KK + E KG S ++ VL+ Y +I SQ
Sbjct: 659 LDQVVEVWKKKRAGDAQSTWERLKSKKTILQESKGASSDE---VLQKYSEAILGSQAGGG 715
Query: 595 AVVRKKRVKREGNNDLNTIESQENANKKGASFL-AVCRGKIVVGIPFPNINDIQVSLKKK 653
A++ L+ + + + +G +F + R VVG+P+PN+ + K +
Sbjct: 716 ALL------------LSVVGGKMS---EGINFSDRLGRLVAVVGLPYPNVASPEWRAKME 760
Query: 654 YNDTYRSSKNLLSGN---------------EWYCNQAFRALNQAIGRCIRHRFDYGAIIL 698
Y ++ ++ L G ++Y N RA+NQ+IGR IRHR DY AI+L
Sbjct: 761 YIESSTRTRLLERGGITPTEASSRAKQVARDFYENSCMRAVNQSIGRAIRHRGDYAAIVL 820
Query: 699 LDERFQEERNRAHISKWLRKSIKQYDSFDASLEG----LKSFFRDVK 741
LD+R+ ER R + W++ + Q DS + L G L SFFR K
Sbjct: 821 LDKRYTSERIRKKLPGWIQGGL-QMDSQEKGLGGIMGALASFFRGKK 866
Score = 77.4 bits (189), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 88/189 (46%), Gaps = 32/189 (16%)
Query: 146 IFYASRTHSQISQVISEYKKTAY------------------RVPMAVLASRKHYCTNKYV 187
I+Y SRTHSQ+SQ I+E ++ + V + L+SR+ C N V
Sbjct: 210 IYYTSRTHSQLSQFITELRRPKFPASLPEGLSSADAKAQDELVKLLPLSSRQKLCINPSV 269
Query: 188 RDKENIDEECKLLLGDRNLGCPQFKNVHKVRGHP---------SLQKGGCHEVHDIEDLV 238
+++ + DR Q K+ K P + + DIEDL
Sbjct: 270 SRLKSVQA-----INDRCAELQQPKSSRKCDFVPREELLAQTHEFRDTALATIPDIEDLH 324
Query: 239 NVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDI 298
+G+ ++ C YYA+R+ A++V PY ++ R A+ + ++G ++I+DEAHNI D
Sbjct: 325 QLGKSLQVCPYYASRTALPGAEIVTLPYPLLLQKSARDALGIKLEGNVVIVDEAHNIMDA 384
Query: 299 ARDAGSVDI 307
+ + D+
Sbjct: 385 VSNVYAADL 393
Score = 53.9 bits (128), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 23 IQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNC 82
I P+ PY Q FM V L+ + G +LESPTGTGKSLSL+C++L W +N
Sbjct: 17 IDFHHPFTPYDVQEKFMRTVYQVLETGE--GQV-GILESPTGTGKSLSLICASLTWLRNH 73
Query: 83 KLKNQLANISHSK 95
K A + +K
Sbjct: 74 KSSAYRAALEEAK 86
>gi|313241207|emb|CBY33490.1| unnamed protein product [Oikopleura dioica]
Length = 761
Score = 100 bits (250), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 131/290 (45%), Gaps = 41/290 (14%)
Query: 57 ALLESPTGTGKSLSLLCSTLAWQQNCKLKNQLANISHSKPDTE----------------- 99
+ ESPTGTGKSLS++CS + W ++ + + +L K D E
Sbjct: 14 GIFESPTGTGKSLSIICSAIKWLKDHRNRAELGT-QQPKVDKEEDGELDWLEIEKVKKFR 72
Query: 100 --AVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVK----------KKMTPTIF 147
D + I + + P + A+ ++ ++ IF
Sbjct: 73 KKRKRDDTDDVNAEIRKLMKLSQNPESKENEAEAEFLLADLDSDYDDDDGEGQEFVEKIF 132
Query: 148 YASRTHSQISQVISEYKKTAYR--VPMAVLASRKHYCTNKYVRDKENI---DEECKLLLG 202
YASRTHSQ+SQ + E +K+ ++ V +A +ASR C N V+ + +E CK L
Sbjct: 133 YASRTHSQLSQFVKEIRKSPFKDSVTVAPIASRATLCVNPKVKKLSTVSQMNESCKQL-- 190
Query: 203 DRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLV 262
++N GC +FK +G L + + DIED V G + C +Y AR +
Sbjct: 191 NKNQGC-EFKTK---KGLSLLSHRMNNTLMDIEDTVKFGNENKCCPFYGAREALPTVDVC 246
Query: 263 FCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVL 312
PY+ ++ P R + +++K +++I+DEAHN+ SV + + L
Sbjct: 247 VLPYNLLVVPSARESCGINLKNSVVIIDEAHNLAGAIESCYSVGVTLNAL 296
Score = 94.7 bits (234), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 135/312 (43%), Gaps = 57/312 (18%)
Query: 458 LSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGT----CLEAPHVIDVD 513
+ ++ LNPA +F ++++ + S++L GT+ P + +L + + HVI D
Sbjct: 468 MKVFLLNPASIFAEISKDARSVLLAGGTMKPYQTLKDQLFAEVSSEKLSWFNCEHVIS-D 526
Query: 514 LQVLTSVISTGPDNYPLNASYKTADGYKLMEKL--------------------------- 546
Q+ V+ GP N ++ D + + + L
Sbjct: 527 SQMNALVLQRGPTNERFIFNHSNKDNFAMKQDLGRALVDIVQTVPSGVVVFFASYKQETM 586
Query: 547 -CNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSIS-QGSKCAVVRKKRVKR 604
++++G ++ K LF EPK + +L+ Y S+ +G+ V +V
Sbjct: 587 FYEMFKKSGFLQQIENVKTLFREPKETA--GVAPLLEKYEMSVRVRGAILFAVVGGKVS- 643
Query: 605 EGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYNDTYRSSKNL 664
EG N + +CR I++G+P+P+I ++ L+ DT +SK
Sbjct: 644 EGINFSD----------------GLCRAVIMIGVPYPDIKSAEIKLRM---DTL-NSKRP 683
Query: 665 LSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYD 724
G Y RA+NQ +GR IRHR D I+ D R+ E R R H+ W++ + YD
Sbjct: 684 GGGQMLYTGLCMRAVNQCVGRAIRHRDDSSLILFCDVRYSEPRVRDHLPDWIKTRLTSYD 743
Query: 725 SFDASLEGLKSF 736
+FD + + + F
Sbjct: 744 NFDTAKKHMIDF 755
>gi|170029991|ref|XP_001842874.1| fanconi anemia group J protein [Culex quinquefasciatus]
gi|167865334|gb|EDS28717.1| fanconi anemia group J protein [Culex quinquefasciatus]
Length = 873
Score = 100 bits (250), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 141/313 (45%), Gaps = 52/313 (16%)
Query: 457 TLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEA------PHVI 510
T+ LNP F D+ SIIL GT+ P++ + +L F C E HV+
Sbjct: 572 TMKYLLLNPGARFGDILGSCRSIILAGGTMHPIDELTEQL---FKDCAERVEIRSYRHVV 628
Query: 511 DVDLQVLTSVISTGPDNYPLNASYKTADGYKLMEKLCNRWRETGQWSRLNAKKPLFVEPK 570
D VL I GP L +Y +L+ +L + Q V P
Sbjct: 629 PAD-AVLPLAIGKGPSGKELLFNYANRQNKELLNELSSVLANLCQ-----------VVPH 676
Query: 571 G----GSQEDFEIVLKHYYNSI-SQGSKCAVVRKKRVKRE--GNNDLNTI--ESQENANK 621
G + D+ L +Y +I + G + +KRV RE G ++++I E + A
Sbjct: 677 GIVCFFASYDY---LDQFYATIQTNGRLDRITERKRVFREPRGTTNVDSILAEYAQAARH 733
Query: 622 KGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLS 666
GA L+V GK +VVG+P+PN +++ + +Y D R+ K +
Sbjct: 734 SGALMLSVVGGKLSEGLNFADELGRCVVVVGLPYPNRTSPELAERMRYLD--RTLKPP-A 790
Query: 667 GNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERF-QEERNRAHISKWLRKSIKQYDS 725
GNE+Y N +A+NQ IGR +RH DY +++LLD R+ ER R + W+ ++ +
Sbjct: 791 GNEYYENLCMKAVNQCIGRAVRHIRDYASVVLLDSRYGTSERIRKKLPVWIADGLQCTER 850
Query: 726 FDASLEGLKSFFR 738
+ + L FF+
Sbjct: 851 YGQAHGSLVKFFK 863
Score = 95.1 bits (235), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 106/198 (53%), Gaps = 26/198 (13%)
Query: 146 IFYASRTHSQISQVISEYKKTAY--RVPMAVLASRKHYCTNKYVRD-KEN--IDEECKLL 200
+ + SRTHSQ+SQV++E ++T + ++ + ++ASR++ C N+ VR K N ++E C L
Sbjct: 197 VIFCSRTHSQLSQVVNEVRRTEFGKQIRLTMIASRQNLCINQEVRKLKTNTLVNERC--L 254
Query: 201 LGDRNLGCPQFK----NVHKVRGHPS---------------LQKGGCHEVHDIEDLVNVG 241
+N G K NV K R S L+ EV DIE+LV+
Sbjct: 255 EMQKNSGKATCKDEDGNVSKKRKVSSSAQKCPFYNREAIEELKNNSLFEVQDIEELVSFA 314
Query: 242 QVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARD 301
+ + C YYA+R+ D QL+ PY +++ R +DIK A++I+DEAHN+ D
Sbjct: 315 KQEKACPYYASRAAVGDTQLLMVPYQNLLHRKTREQTGLDIKNAVIIVDEAHNLLDTISS 374
Query: 302 AGSVDIDEDVLLKLQMEL 319
S ++ + L + +++L
Sbjct: 375 IHSQEVSLECLQQARLQL 392
Score = 53.5 bits (127), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 5/57 (8%)
Query: 22 GIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
G Q FP+ PY QL M + + ++R Q + ESPTGTGKSL+L C L+W
Sbjct: 15 GSQFSFPFPPYDIQLDLMRSLYTVVERGQ-----VGIFESPTGTGKSLTLTCGVLSW 66
>gi|322707662|gb|EFY99240.1| DNA repair helicase RAD3 [Metarhizium anisopliae ARSEF 23]
Length = 716
Score = 100 bits (249), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 145/650 (22%), Positives = 260/650 (40%), Gaps = 124/650 (19%)
Query: 175 LASRKHYCTNKYVRDKEN---IDEECKLLL----------GDRNLGCPQFKNVHKVRGHP 221
L SRK+ C + V+ +++ +D C+ L G+ C N+ + H
Sbjct: 33 LTSRKNLCLHPSVKREKSGSVVDARCRSLTAGFVKEKKDRGENVAVCVYHDNLDLLEPHN 92
Query: 222 SLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVD 281
+ G V + ++ G+ + C Y+ AR M +V Y Y+++P I + D
Sbjct: 93 LIPNG----VWTFDGILRYGEEHKQCPYFTARRMMQYCNVVIFSYHYLLDPKIAERVSRD 148
Query: 282 I-KGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQ---MELE-QVCSVNPMIYQPLIEM 336
K I++ DEAHNI+++ +A S DI ED L + LE ++ + + L
Sbjct: 149 FSKDCIVVFDEAHNIDNVCIEALSTDITEDSLRRASRGAQNLEHKITEMRDTDQEQLQNE 208
Query: 337 TQDLVGWIERRKATLAKREFQHFFSCWTGDKALRELQEANISR--------QCFPILLEC 388
Q LV + R+A A++E + + LRE NI R + F L+
Sbjct: 209 YQKLVQGL--READEARQEDAFMANPALPEDLLREAVPGNIRRAEHFVAFLKRFIEYLKT 266
Query: 389 ATKAIKEATDTE-SELPHLSGMSVITLEGL------FSSLTYFFSRNGSHVSDYQ----- 436
K + ++T S L HL + I + L +SL + +++ DYQ
Sbjct: 267 RMKVRQVISETPPSFLAHLKEHTFIEKKPLRFCAERLTSLVR--TLELTNIEDYQPLQEV 324
Query: 437 ---------------LALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIIL 481
L L+ + ++ P L CL+ A+ + V E S+I+
Sbjct: 325 ATFATLVATYEKGFLLILEPFESDTAEVPNP----ILHFTCLDAAIAIRPVFERFYSVII 380
Query: 482 TSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQ-VLTSVISTGPDNYPLNASYK----- 535
TSGT+SP+ + L F T ++ + + + + L +++ G D ++ S++
Sbjct: 381 TSGTISPLEMYPKML--DFSTVIQESYSMTLARRSFLPMIVTRGSDQASISTSFQVRNEP 438
Query: 536 ----------------TADG-------YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGG 572
T DG Y ME + + W+ G + K + VE
Sbjct: 439 SVVRNYGTLLIEFAKITPDGLVVFFPSYLYMESIISMWQGMGILDEVWKYKLILVETPDA 498
Query: 573 SQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRG 632
+ + L+ Y + G ++ R K D + ++ G R
Sbjct: 499 QETS--LALETYRTACCNGRGAILLCVARGKVSEGIDFD--------HQYG-------RT 541
Query: 633 KIVVGIPFPNINDIQVSLKKKY-NDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRF 691
+ +G+PF + + ++ +TYR + N++ A R Q +GR +R +
Sbjct: 542 VLCIGVPFQYTESRILKARLEFLRETYR-----IKENDFLSFDAMRHAAQCLGRVLRGKD 596
Query: 692 DYGAIILLDERFQEERNRAHISKWLRKSIKQYD---SFDASLEGLKSFFR 738
DYG ++L D RFQ + R + KW+ + + D S D ++ + F R
Sbjct: 597 DYGIMVLADRRFQ--KKRVQLPKWINQGLLDVDTNLSTDMAVSSARRFLR 644
>gi|68471265|ref|XP_720409.1| hypothetical protein CaO19.7119 [Candida albicans SC5314]
gi|77022390|ref|XP_888639.1| hypothetical protein CaO19_7119 [Candida albicans SC5314]
gi|46442275|gb|EAL01566.1| hypothetical protein CaO19.7119 [Candida albicans SC5314]
gi|76573452|dbj|BAE44536.1| hypothetical protein [Candida albicans]
Length = 765
Score = 100 bits (249), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 155/732 (21%), Positives = 290/732 (39%), Gaps = 164/732 (22%)
Query: 122 PSTNGQTAQVAMNNKNVKKKMT----PTIFYASRTHSQISQVISE-YKKTAYRVPMAV-- 174
PS G+T V++ + V +M I Y SRT S+I + + E +K +R
Sbjct: 43 PSGTGKT--VSLLSLTVAYQMHYPEHRKIVYCSRTMSEIEKALIELHKLMEFRANELGEV 100
Query: 175 -------LASRKHYCTNKYV---RDKENIDEECKLL------------LGDRNLGCPQFK 212
L SRK+ C + + R +DE+C+ + + + C +
Sbjct: 101 EDFRGLGLTSRKNLCLHPTISKERKGVVVDEKCRRITNGQLKEKIEKGVPTEDSLCSFHE 160
Query: 213 NVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINP 272
++ + H + G V+ + L+ + C Y+ R M ++ Y Y+++P
Sbjct: 161 KLYDLEPHNLVPPG----VYSFDALIKYCKEEGTCPYFTVRRMIPFCNIIIYSYHYLLDP 216
Query: 273 VIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLK----------------- 314
I + ++ K +I+I DEAHNI+++ ++ S+D+ ++ L K
Sbjct: 217 KIAERVSRELSKDSIVIFDEAHNIDNVCIESLSLDLTDETLKKASRGANKLGEAIEDMKA 276
Query: 315 -----LQMELEQVCS---------------VNPMIYQPLIEMTQDLVGWIERRKATLA-- 352
LQ E EQ+ NP++ Q L++ + + G I + + +A
Sbjct: 277 QDSEKLQNEYEQLVEGLRQAEIARDQELFMANPVLPQDLLD--EAIPGNIRKGEHFIAFL 334
Query: 353 KREFQHFFSCWTGDKALRELQEANIS-RQCFPILLECATKAIKEATDTESELPHLSGMSV 411
KR ++ T K L + E S Q L K ++ ++ S L ++
Sbjct: 335 KRFIEYL---KTRMKVLHVISETPTSFLQHLKELTYIERKPLRFCSERLSLLVRTLEVTE 391
Query: 412 ITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKD 471
I + F + ++ S +QL L+ Y S P L CL+ ++ K
Sbjct: 392 IDDFNALKDIATFATLVSTYDSGFQLILEPYETEGSTVPNP----ILHFTCLDASIAIKP 447
Query: 472 VAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQ-VLTSVISTGPDNYPL 530
V + S+I+TSGT+SP++ + L +F T ++ + + + + L +++ G D +
Sbjct: 448 VFDRFSSVIITSGTISPLDMYPKML--KFETVIQESYAMTLARRSFLPMIVTKGSDQVSI 505
Query: 531 NASYK---------------------TADG-------YKLMEKLCNRWRETGQWSRLNAK 562
++ ++ T DG Y ME + + W+ G +
Sbjct: 506 SSRFEIRNDPSVVRNYGSLLIEFAKITPDGMVVFFPSYLYMESIISMWQSMGVLDEVWKH 565
Query: 563 KPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKK 622
K + VE + + L+ Y + S G +
Sbjct: 566 KLILVETPDAQETS--LALETYRKACSNG------------------------------R 593
Query: 623 GASFLAVCRGKIVVGIPFPN---INDIQVSLKKKYNDTYRSSKNL--------LSGNEWY 671
GA L+V RGK+ GI F + + + + +Y ++ L + N++
Sbjct: 594 GAVLLSVARGKVSEGIDFDHHYGRTVLMIGIPFQYTESRILKARLEFMRDHFQIKENDFL 653
Query: 672 CNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYD---SFDA 728
A R Q +GR +R + DYG ++L D RF ++N+ + KW+ +++ D S D
Sbjct: 654 SFDAMRHAAQCLGRVLRGKDDYGIMVLADRRFARKKNQ--LPKWIAQALNDSDTNLSTDM 711
Query: 729 SLEGLKSFFRDV 740
+L K F R +
Sbjct: 712 ALATAKKFLRSL 723
Score = 47.8 bits (112), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 46/83 (55%), Gaps = 6/83 (7%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+ + + V FPY + Y Q +MC + TLD G+C +LE P+GTGK++SLL T+
Sbjct: 3 FFIDDLPVLFPYPRIYPEQYSYMCDIKKTLDVG---GNC--ILEMPSGTGKTVSLLSLTV 57
Query: 77 AWQQNCKLKNQLANISHSKPDTE 99
A+Q + ++ S + + E
Sbjct: 58 AYQMHYPEHRKIVYCSRTMSEIE 80
>gi|328855625|gb|EGG04750.1| hypothetical protein MELLADRAFT_108080 [Melampsora larici-populina
98AG31]
Length = 795
Score = 100 bits (249), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 157/709 (22%), Positives = 280/709 (39%), Gaps = 147/709 (20%)
Query: 122 PSTNGQTAQ-----VAMNNKNVKKKMTPTIFYASRTHSQISQVISEYKK-TAYRV----- 170
PS G+T VA + +K+ + Y SRT +I + + E K+ AYR
Sbjct: 40 PSGTGKTISLLSLIVAYQQNHPEKR---KLVYCSRTVPEIEKALIELKRLMAYRASQLRL 96
Query: 171 --------PM-------AVLASRKHYCTNKYV-RDKEN--IDEECKLLL-------GDRN 205
P+ L SRK+ C + V R+K+ +D C+ L G N
Sbjct: 97 RAELTNAGPIEDEDFLGIGLTSRKNLCIHPDVSREKKGKVVDARCRDLTSAWACEQGRAN 156
Query: 206 LGCPQFKNVHKVRGHPSLQKGGC--HEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVF 263
G H+ G L+ G V +E++ N G C Y+A R M A +V
Sbjct: 157 PGSVPLCEFHEKLGE--LEAGDLIPRGVWTLEEITNYGHQQGICPYFAVRRMLAYADVVI 214
Query: 264 CPYSYIINPVIRGAMEVDIK-GAILILDEAHNIEDIARDAGSVDIDEDVL-------LKL 315
+ Y+++P + + +I +I++ DEAHNI+++ ++ S+D+++ +L L
Sbjct: 215 YSFHYLLDPKVATQVSKEISPNSIVVFDEAHNIDNVCIESLSIDLNKSILDNAGRAIENL 274
Query: 316 QMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRELQEA 375
+++++++ + Q Q LV ++ + A+ E + D L+E
Sbjct: 275 EVKIQEIKRTDASKLQ---NEYQRLVRGLQGSELEQAEDEAGVIATPVLPDDLLQEAIPG 331
Query: 376 NISR-QCFPILLECATKAIKE--------ATDTESELPHLSGMSVI-------------- 412
NI R + F L + +K A S L HL ++ I
Sbjct: 332 NIRRAEHFTAFLTRFVEYLKTRMRVLHVVAETPLSFLQHLKDLTFIDRKPLRFCSERLTS 391
Query: 413 ---TLE--------GLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLW 461
TLE GL + F + ++ + L L+ + ++ P L
Sbjct: 392 LIRTLELTQLDQYNGL-QQVASFATLVATYEKGFLLILEPFETENATVP----NPVFHLT 446
Query: 462 CLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQ-VLTSV 520
CL+ ++ K V + S+++TSGT+SP++ + LG F + ++ + + + L V
Sbjct: 447 CLDASLAIKPVFDRFSSVVITSGTISPLDMYPKMLG--FESAVQESYSMTLTRNCFLPLV 504
Query: 521 ISTGPDNYPLNASYK---------------------TADG-------YKLMEKLCNRWRE 552
I+ G D +++ ++ DG Y ME + W +
Sbjct: 505 ITRGADQVAISSRFEVRNDPSVVRNFGTVLIDYCKIVPDGIVAFFPSYLYMESIVAAWHD 564
Query: 553 TGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNT 612
G + K +FVE + I L++Y + G ++ R K D +
Sbjct: 565 MGILKEVWKYKLIFVETPDAVETS--IALENYRRACDNGKGAVLLSVARGKVSEGIDFD- 621
Query: 613 IESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKY-NDTYRSSKNLLSGNEWY 671
+ G R I+ GIP+ + + ++ D YR + N++
Sbjct: 622 -------HNYG-------RAVIMFGIPYQYTESRILKARLEFLRDNYR-----IRENDYL 662
Query: 672 CNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSI 720
A R Q +GR +R + DYG +I D+RF + RA + KW+ I
Sbjct: 663 TFDAMRHAAQCVGRVLRGKTDYGLMIFADKRFAKADKRAKLPKWINAYI 711
Score = 49.7 bits (117), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 49/83 (59%), Gaps = 9/83 (10%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+++ +++ FPY + Y Q+ + R TLD GHC +LE P+GTGK++SLL +
Sbjct: 3 FNIDDLEIIFPYDKIYPEQMSDLKR---TLDVG---GHC--VLEMPSGTGKTISLLSLIV 54
Query: 77 AWQQNCKLKNQLANISHSKPDTE 99
A+QQN K +L S + P+ E
Sbjct: 55 AYQQNHPEKRKLVYCSRTVPEIE 77
>gi|156400058|ref|XP_001638817.1| predicted protein [Nematostella vectensis]
gi|156225941|gb|EDO46754.1| predicted protein [Nematostella vectensis]
Length = 735
Score = 100 bits (249), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 153/737 (20%), Positives = 270/737 (36%), Gaps = 173/737 (23%)
Query: 122 PSTNGQTAQ----VAMNNKNVKKKMTPTIFYASRTHSQISQVISEYKK-TAY-------- 168
PS G+T + KN ++T I Y SRT +I +V+ E KK T Y
Sbjct: 19 PSGTGKTVSLLSLIVAYLKNKPLELTKLI-YCSRTVPEIEKVMEELKKLTEYYESETGEK 77
Query: 169 -RVPMAVLASRKHYCTNKYV---RDKENIDEECKLLLG---------DRNLGCPQFKNVH 215
+ L+SRK+ C + V R+ + +D +C + D ++ F
Sbjct: 78 PNILALALSSRKNLCIHPEVAGEREGKKVDGKCLSMTASFVRLKHKEDSSVPVCNFYEDF 137
Query: 216 KVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIR 275
G G + +++DL G+ C Y+ AR A ++ Y Y+++P I
Sbjct: 138 DSLGRDEKMPPGSY---NLDDLRQFGRKKGWCPYFLARRAIYHANVIVYSYHYMLDPKIA 194
Query: 276 GAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQVCSV--------- 325
+ ++ K A+++ DEAHNI+++ D+ SV I L + +E + SV
Sbjct: 195 DLVSKELDKKAVVVFDEAHNIDNVCIDSMSVTISRRTLDRSHANVESLASVIDRIKATDA 254
Query: 326 ----------------------------NPMIYQPL--------IEMTQDLVGWIERRKA 349
NP++ + I + VG++ R
Sbjct: 255 QKLREEYNRLVEGLRQASEARDTDIVLSNPVLPDEVLQESVPGNIRKAEHFVGFMRRFIE 314
Query: 350 TLAKR-EFQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSG 408
L R QH Q+ I R+ E + ++ E+P +
Sbjct: 315 YLKTRLRIQHVVQESPMSFLQHIYQQVCIERKPLRFCAERLSSLLRTL-----EIPEMQD 369
Query: 409 MSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVV 468
+ L F++L +++ + + ++ + R P L C++ ++
Sbjct: 370 YGPLVLIANFATLVSTYNKG------FNIIIEPFDDRTPTIPNP----ILHFSCMDASIA 419
Query: 469 FKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTS-VISTGPDN 527
K V + S+++TSGTLSP++ + L F A + + L ++S G D
Sbjct: 420 VKPVFDRFQSVVITSGTLSPIDMYPKIL--DFRPVTMATFTMTLARTCLCPMIVSRGSDQ 477
Query: 528 YPLNASYK---------------------TADG-------YKLMEKLCNRWRETGQWSRL 559
+ ++ DG Y ME + + W + G S +
Sbjct: 478 VAMTTKFEMREDLAVIRNYGNLLTEMSAVVPDGIVCFFTSYLYMESVVSLWHDQGIISNI 537
Query: 560 NAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENA 619
K LF+E ++ + H Y +
Sbjct: 538 QKNKLLFIETTDAAETSLAL---HNYQKACE----------------------------- 565
Query: 620 NKKGASFLAVCRGKIVVGIPF-------------PNINDIQVSLKKKYNDTYRSSKNLLS 666
N +GA L+V RGK+ GI F P + LK + Y + +
Sbjct: 566 NGRGAILLSVARGKVSEGIDFDHHYGRAVIMFGIPYVYTQSRILKARLE--YLREQFNIR 623
Query: 667 GNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQY--- 723
N++ A R Q +GR IR + DYG ++ D+RF + R + KW+++ +K+
Sbjct: 624 ENDFLTFDAMRHAAQCVGRAIRGKTDYGIMVFADKRFSKVDKRGKLPKWIQEYLKESLCN 683
Query: 724 DSFDASLEGLKSFFRDV 740
S D S++ K F R +
Sbjct: 684 LSTDESVQIAKRFLRQM 700
>gi|297277341|ref|XP_002808245.1| PREDICTED: LOW QUALITY PROTEIN: TFIIH basal transcription factor
complex helicase subunit-like [Macaca mulatta]
Length = 739
Score = 100 bits (249), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 168/713 (23%), Positives = 285/713 (39%), Gaps = 122/713 (17%)
Query: 122 PSTNGQTAQV---AMNNKNVKKKMTPTIFYASRTHSQISQVISEYKKT--------AYRV 170
PS G+T + M + + Y SRT +I +VI E +K ++
Sbjct: 19 PSGTGKTVSLLALIMAYQRAYPLEVTKLIYCSRTVPEIEKVIEELRKLLNFYEKQEGEKL 78
Query: 171 PMAVLA--SRKHYCTNKYV---RDKENIDEECKLLLG---------DRNLGCPQFKNVHK 216
P LA SRK+ C + V R +++D +C L D +L +F
Sbjct: 79 PFLGLALSSRKNLCIHPEVTPLRFGKDVDGKCHSLTASYVRAQYQHDTSLPHCRFYEEFD 138
Query: 217 VRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRG 276
G G +++++DL +G+ C Y+ AR A +V Y Y+++P I
Sbjct: 139 AHGREVPLPAG---IYNLDDLKALGRRQGWCPYFLARYSILHANVVVYSYHYLLDPKIAD 195
Query: 277 AMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELE----QVCSVNPMIYQ 331
+ ++ + A+++ DEAHNI+++ D+ SV++ L + Q LE V + Q
Sbjct: 196 LVSKELARKAVVVFDEAHNIDNVCIDSMSVNLTRRTLDRCQGNLETLQKTVLRIKETDEQ 255
Query: 332 PLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRELQEANI-SRQCFPILLECAT 390
L + + LV + R+A+ A+ H + D+ L+E +I + + F L
Sbjct: 256 RLRDEYRRLVEGL--REASAARETDAHLANPVLPDEVLQEAVPGSIRTAEHFLGFLRRLL 313
Query: 391 KAIK-----EATDTESELPHLSGMS--------------------VITLE----GLFSSL 421
+ +K + ES LSG++ + TLE FS L
Sbjct: 314 EYVKWRLRVQHVVQESPPAFLSGLAQRVCIQRKPLRFCAERLRSLLHTLEITDLADFSPL 373
Query: 422 TYFFSRNGSHVSDYQLALQKYIK-RDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSII 480
T + + VS Y I+ D + P L C++ ++ K V E S+I
Sbjct: 374 T-LLANFATLVSTYAKGFTIIIEPFDDRTPTIA-NPILHFSCMDASLAIKPVFERFQSVI 431
Query: 481 LTSGTLSPMNSFSSELG---VQFGT--------CLEAPHVIDV--DLQVLTSVISTGPD- 526
+TSGTLSP++ + L V T CL P +I D ++S T D
Sbjct: 432 ITSGTLSPLDIYPKILDFHPVTMATFTMTLARVCL-CPMIIGRGNDQVAISSKFETREDI 490
Query: 527 -------NYPLNASYKTADG-------YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGG 572
N L S DG Y+ ME W E G + K LF+E + G
Sbjct: 491 AVIRNYGNLLLEMSAVVPDGIVAFFTSYQYMESTVASWYEQGILENIQRNKLLFIETQDG 550
Query: 573 SQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFL-AVCR 631
++ + L+ Y G C R G L+ + + G F+ R
Sbjct: 551 AETS--VALEKYQEV---GVPCXNGR-------GAVRLSWARVKPS---DGIHFMHHYGR 595
Query: 632 GKIVVGIPFPNINDIQVSLKKKY-NDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHR 690
I+ G+P+ + + +Y D ++ + N++ A R Q +GR IR +
Sbjct: 596 AVIMFGVPYVYTQSRILKARLEYLRDQFQ-----IRENDFLTFDAMRHAAQCVGRAIRGK 650
Query: 691 FDYGAIILLDERFQEERNRAHISKWLRKSIKQYD---SFDASLEGLKSFFRDV 740
DYG ++ D+RF R + +W+++ + + + D ++ K F R +
Sbjct: 651 TDYGLMVFADKRFARGDKRGKLPRWIQEHLTDANLNLTVDEGVQVAKYFLRQM 703
>gi|332839863|ref|XP_003313866.1| PREDICTED: probable ATP-dependent RNA helicase DDX11 isoform 2 [Pan
troglodytes]
Length = 856
Score = 100 bits (249), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 127/306 (41%), Gaps = 71/306 (23%)
Query: 457 TLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSEL----GVQFGTCLE--APHVI 510
TL LNPAV F V + ++++ GT+ P++ F +L GV+ +E HVI
Sbjct: 594 TLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHVI 653
Query: 511 DVDLQVLTSVISTGPDNYPLNASYKTADGYKLMEKLCNRWRETGQWSRLNAKKPLFVEPK 570
D +L VI +G N PL +++ RE Q +F EPK
Sbjct: 654 PPD-NILPLVICSGISNQPLEFTFQK--------------RELPQM--------IFQEPK 690
Query: 571 GGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVC 630
Q E VL Y I C QE GA L+V
Sbjct: 691 SAHQ--VEQVLLAYSRCI---QACG--------------------QERGQVTGALLLSVV 725
Query: 631 RGK---------------IVVGIPFPNINDIQVSLKKKYNDTY--RSSKNLLSGNEWYCN 673
GK ++VG+PFPNI ++ K Y D R+ G N
Sbjct: 726 GGKMSEGINFSDNLGRCVVMVGMPFPNIRSAELQEKMAYLDQTLPRAPGQAPPGKALVEN 785
Query: 674 QAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGL 733
+A+NQ+IGR IRH+ D+ +I+LLD+R+ A + W+R ++ +F ++ +
Sbjct: 786 LCMKAVNQSIGRAIRHQKDFASIVLLDQRYARPPVLAKLPAWIRARVEVKATFGPAIAAM 845
Query: 734 KSFFRD 739
+ F R+
Sbjct: 846 QKFHRE 851
Score = 86.3 bits (212), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 97/200 (48%), Gaps = 28/200 (14%)
Query: 146 IFYASRTHSQISQVISEYKKTAY--RVPMAVLASRKHYCTNKYVRD---KENIDEECKLL 200
I+Y SRTHSQ++Q + E KK+ + V + L SR++ C N+ V+ + I++ C +
Sbjct: 229 IYYCSRTHSQLAQFVHEVKKSPFGKDVRLVSLGSRQNLCVNEDVKSLGSVQLINDRCVDM 288
Query: 201 LGDRNL-------------------GCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVG 241
R+ CP F N H+ G L+ EV DIE L+ +G
Sbjct: 289 QRSRHEKKKGAEEEKPKRRRQEKQAACP-FYN-HEQMG--LLRDEALAEVKDIEQLLALG 344
Query: 242 QVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARD 301
+ R C YY +R AQLV PY +++ R A + ++ ++I+DEAHN+ D
Sbjct: 345 KEARACPYYGSRLAIPAAQLVVLPYQMLLHAATRQAAGIRLQDQVVIIDEAHNLIDTITG 404
Query: 302 AGSVDIDEDVLLKLQMELEQ 321
SV++ L + +L Q
Sbjct: 405 MHSVEVSGSQLCQAHSQLLQ 424
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 40/68 (58%), Gaps = 5/68 (7%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
VG I FP+ PY Q FM + L+ A + G + ESPTGTGKSLSL+C L+W
Sbjct: 8 VGAIHFPFPFTPYSIQEDFMAELYRVLE-AGKIG----IFESPTGTGKSLSLICGALSWL 62
Query: 80 QNCKLKNQ 87
++ + K +
Sbjct: 63 RDFEQKKR 70
>gi|390366295|ref|XP_780825.3| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit isoform 2 [Strongylocentrotus purpuratus]
Length = 734
Score = 100 bits (249), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 161/751 (21%), Positives = 287/751 (38%), Gaps = 141/751 (18%)
Query: 20 VGGIQVEFPYQ-PYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
V G+ V FPY Y Q ++M + LD H +LE P+GTGK++SLL +A+
Sbjct: 5 VDGLLVHFPYDYIYPEQFMYMMELKKLLD-----AKGHGVLEMPSGTGKTVSLLALIVAY 59
Query: 79 -QQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKN 137
Q N +L S + P+ E + L +I E G+ +
Sbjct: 60 IQANPHELTKLIYCSRTVPEIEKAVEELRRLLDYIEEQ---------TGEKPNFVGLALS 110
Query: 138 VKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEEC 197
+K + H ++S+ R+ V+ S+ H T Y+R++ D
Sbjct: 111 SRKNLC--------IHPEVSK---------ERIG-KVVDSKCHSLTASYIRERRKHDPAV 152
Query: 198 KLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMAD 257
+ C ++ ++ G + ++DL +G+ C Y+ AR
Sbjct: 153 PI--------CDFYEEFDAAGRDSPIEPGA----YSLDDLKEIGRQNGWCPYFLARYTIT 200
Query: 258 DAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQ 316
A ++ Y Y+++P I + ++ K + +I DEAHNI+++ ++ SV+I L K
Sbjct: 201 HANIIVYSYHYLLDPKIAEQVSKELSKQSAVIFDEAHNIDNVCIESMSVNISRKTLDKSN 260
Query: 317 MELE----QVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALREL 372
L+ + + Q L E Q LV + R+A+ A+ H + D+ L E
Sbjct: 261 QNLDSLTRHINRIKDTDAQRLREEYQRLVDGL--REASRARETDVHLSNPALPDEVLDEA 318
Query: 373 QEANI-SRQCFPILLECATKAIKEATDTE---SELPHLSGMSVIT--------------- 413
NI + + F L + +K + SE P V +
Sbjct: 319 VPGNIRTAEHFIGFLRRFVEYLKTRLRVQHVISETPASFLKDVFSKVCIERKPLRFCAER 378
Query: 414 LEGLFSSLTY---------------FFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTL 458
L L +L F + ++ + L ++ + D K P + L
Sbjct: 379 LHSLLRTLELTDVQDNMSPLVAVSGFATLVSTYTKGFSLIIEPF---DDKTPTIS-NPVL 434
Query: 459 SLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQ------FGTCLEAPHVIDV 512
C++ ++ K V + S+++TSGTLSP++ + L + F L + +
Sbjct: 435 HFSCMDASIAIKPVFDRFQSVVITSGTLSPLDMYPKILDFRPVSMASFSMTLSRSSICPI 494
Query: 513 ------DLQVLTSVISTGPD--------NYPLNASYKTADG-------YKLMEKLCNRWR 551
D ++S + D N + S DG Y ME + W
Sbjct: 495 IVARGNDQVTISSRFESREDVAVIRNYGNLIVELSGIVPDGIVAFFTSYTYMESVVATWY 554
Query: 552 ETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLN 611
E G + K LF+E + ++ I L +Y+ + G ++ R K D +
Sbjct: 555 EQGIIDSIQKNKLLFIETQDAAET--SIALNNYHKACENGRGAILLSVARGKVSEGIDFD 612
Query: 612 TIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKY-NDTYRSSKNLLSGNEW 670
+ G R I++GIP+ + + +Y D Y+ + N++
Sbjct: 613 --------HHYG-------RAVIMLGIPYVYTQSRILKARLEYLRDQYQ-----IKENDF 652
Query: 671 YCNQAFRALNQAIGRCIRHRFDYGAIILLDE 701
A R Q +GR +R + DYG ++ D+
Sbjct: 653 LTFDAMRHAAQCVGRALRGKTDYGIMVFADK 683
>gi|409044127|gb|EKM53609.1| hypothetical protein PHACADRAFT_148290 [Phanerochaete carnosa
HHB-10118-sp]
Length = 859
Score = 100 bits (248), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 146/331 (44%), Gaps = 77/331 (23%)
Query: 463 LNPAVVFKDVAELSLSIILTSGTLSPMNSFSSEL----GVQFGTCLEAPHVIDVD-LQVL 517
LNPA F++V E++ +++L GT+SP++ +++L + T H++ + LQ L
Sbjct: 547 LNPATYFQEVVEVARAVVLAGGTMSPISDITAQLFPFVPQERLTTFSCGHIVPPNSLQTL 606
Query: 518 TSVISTGPDNYPLNASYKTADGYKLMEKL----------------------------CNR 549
V+ GP + +++ + + L+ +L
Sbjct: 607 --VVKKGPKGSQMQFKFESRNDHALLAELGQVLFNFASLVPGGMVVFVPSYGFLHTVMGV 664
Query: 550 WRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNND 609
W ++G RL +KK +F EP+ ++ E VL+ Y I A
Sbjct: 665 WEKSGLLERLRSKKKVFTEPQESAE--VETVLRDYAAEIQSAGDGA-------------- 708
Query: 610 LNTIESQENANKKGASFLAV---------------CRGKIVVGIPFPNINDIQVSLKKKY 654
+ + K+GA AV R ++VG+PF N+ ++ + Y
Sbjct: 709 -----PADTSKKRGALLFAVVGAKLSEGLNFSDNLARAVVIVGLPFANLASPELRERMAY 763
Query: 655 NDTYRSSKNLL------SGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERN 708
+ + +++ +G E Y N A+NQ+IGR IRHR D+ ++ILLD R+ R
Sbjct: 764 VNRQQQGRDVKPAGAKDAGTELYENMCMNAVNQSIGRAIRHRGDWASLILLDSRYASPRI 823
Query: 709 RAHISKWLRKSIKQYDSFDASLEGLKSFFRD 739
R + KW+ K++ ++F +++ + F+R+
Sbjct: 824 RNKLPKWIGKNVTIAETFGEAVKEMGRFYRE 854
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 82/170 (48%), Gaps = 22/170 (12%)
Query: 146 IFYASRTHSQISQVISEYKK----------------TAYRVPMAVLASRKHYCTNKYVRD 189
I+Y SRTHSQ+SQV+ E +K + + LASRK C N+ ++
Sbjct: 192 IYYTSRTHSQLSQVLQELRKLSISLSPSSDDEQNDASVVDIRTVSLASRKQLCVNEKLKG 251
Query: 190 KE-NIDEECKLLL---GDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVR 245
K ++DE C+ LL GD+ C ++ DIE LV GQ R
Sbjct: 252 KGGDLDEACRQLLSEKGDKR--CSYLPPADDETRMLDMRDQILATPKDIESLVQTGQESR 309
Query: 246 GCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNI 295
C Y+ +R AQLV PY+ ++ R ++ +D+ ++I+DEAHN+
Sbjct: 310 TCPYFGSRKAILQAQLVLLPYNLLLQRTARESLGIDLTDQVIIVDEAHNL 359
Score = 48.1 bits (113), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 7/77 (9%)
Query: 27 FPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCKLKN 86
FP+ PY QL M + ++ + ++ESPTGTGK+LSLLC++L W ++ + +
Sbjct: 14 FPFAPYDIQLGLMRHLYENIENRR-----VTVVESPTGTGKTLSLLCASLTWLRDEQDRA 68
Query: 87 QLANISHSKPDTEAVTD 103
+ IS D + V D
Sbjct: 69 RKGKISTD--DEQEVMD 83
>gi|410076050|ref|XP_003955607.1| hypothetical protein KAFR_0B01730 [Kazachstania africana CBS 2517]
gi|372462190|emb|CCF56472.1| hypothetical protein KAFR_0B01730 [Kazachstania africana CBS 2517]
Length = 809
Score = 100 bits (248), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 101/190 (53%), Gaps = 20/190 (10%)
Query: 127 QTAQVAMNNKNVKKKMTPT-IFYASRTHSQISQVISEYKKTAY------------RVPMA 173
+TA+ +N V + P I++ASRTHSQ++Q S+ + + R+
Sbjct: 177 KTAKSNDSNIFVNASLNPVKIYFASRTHSQLNQFASQLRLPTFPSSFDKNLVPSERIKYL 236
Query: 174 VLASRKHYCTNKYVRD---KENIDEECKLLLGDRNLGCPQFKNV---HKVRGHPSLQKGG 227
L S+K C V+ E I++ C L ++ GCP + N H+ + + +
Sbjct: 237 PLGSKKQLCIEPSVKKWKTLEAINDACSELRHSKD-GCPYYTNTTEWHQSLANNTFRDNI 295
Query: 228 CHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAIL 287
+VHDIEDLV++G+ + C YYA+R D ++V PY Y+++ R M +D++ +I+
Sbjct: 296 FAKVHDIEDLVSLGETLHICPYYASRDHLDGVEIVTLPYQYLLSEQTRRIMNLDLQNSIV 355
Query: 288 ILDEAHNIED 297
I+DEAHN+ D
Sbjct: 356 IIDEAHNLID 365
Score = 93.6 bits (231), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 135/314 (42%), Gaps = 63/314 (20%)
Query: 463 LNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQF----GTCLEAPHVI-------- 510
L P F+ + SL +IL GT+ P++ F L Q H+I
Sbjct: 520 LEPNKQFESIVNGSLKVILAGGTMEPVSDFYDNLFPQIPKNEAVKFSCDHIIPDSNLNTF 579
Query: 511 --------------DVDLQV----LTSVISTGPDNYPLNASYKT-ADGYKLMEKLCNRWR 551
D Q+ L + I+ N P N Y+ ++ + + W+
Sbjct: 580 IVDRESNFEFTFGKRTDAQLINADLYNFITKLSQNVPKNGGIIVFLPSYQYLKTVIDNWK 639
Query: 552 ETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLN 611
+ G + +LN + +F E K D E L Y + GS V ++ EG
Sbjct: 640 QNGTFDKLNQIRKIFYESK-----DNEDPLSKYIECVQDGSVLFAVVGGKLS-EG----- 688
Query: 612 TIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYND--------TYRSSKN 663
I Q+N +CR ++VG+PFPN+ ++++K+ + + T + +K
Sbjct: 689 -INFQDN----------LCRALVMVGLPFPNVFSGELTIKRAHIEEKTIRNGGTQKEAKE 737
Query: 664 LLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQY 723
+ E+ N +A+NQ +GR IRH DY I LLD+R+ + R +S W+++ I++
Sbjct: 738 --ATKEFLENICMKAVNQCVGRAIRHANDYSNIYLLDKRYNNDNIRDKLSNWVKRRIQKD 795
Query: 724 DSFDASLEGLKSFF 737
+S DA + +SF
Sbjct: 796 NSVDAIMNATRSFL 809
Score = 53.5 bits (127), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 38/57 (66%), Gaps = 5/57 (8%)
Query: 28 PYQPYGSQLVFMCRVISTL-DRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCK 83
P++PY QL M + TL D+ ++ A+LESPTGTGK+LSL+CST+ W + K
Sbjct: 15 PFKPYDIQLELMQCIYDTLSDKTKK----IAILESPTGTGKTLSLICSTITWLRENK 67
>gi|116179420|ref|XP_001219559.1| hypothetical protein CHGG_00338 [Chaetomium globosum CBS 148.51]
gi|88184635|gb|EAQ92103.1| hypothetical protein CHGG_00338 [Chaetomium globosum CBS 148.51]
Length = 979
Score = 100 bits (248), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 131/311 (42%), Gaps = 47/311 (15%)
Query: 23 IQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNC 82
I PY PY QL FM V L+R +G +LESPTGTGKSLSL+C+TL W +
Sbjct: 7 IDFHHPYTPYDVQLNFMRTVYDVLERG--NGQV-GILESPTGTGKSLSLICATLTWLR-- 61
Query: 83 KLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKKM 142
+H + EA D A G PE + T + +
Sbjct: 62 ---------AHKRARYEASFDATAAGMRDEPEWMVQARAAAQARGTGAAVGGAREGDGE- 111
Query: 143 TPTIFYASRTHSQISQVISEYKKTAY--RVPMAVLAS--------------------RKH 180
+ ++Q ISE ++ A+ +P +L+S R+
Sbjct: 112 ------GEGEGTGLTQFISELRRPAFPPSIPTEMLSSNEKDEEQPTTETVKQLPLSSRQK 165
Query: 181 YCTNKYV---RDKENIDEECKLLLGDRNLG-CPQFKNVHKVRGHPSLQKGGCHEVHDIED 236
C N V I++ C L + C N ++ + V DIED
Sbjct: 166 LCINPSVVRLGSLSAINDRCTELQQSKTKDKCSFMPNTENLKQAHDFRDAALATVPDIED 225
Query: 237 LVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIE 296
L +G+ ++ C YYA+R+ A+++ PY ++ R A+ + ++G ++I+DEAHN+
Sbjct: 226 LHRIGKELQVCPYYASRTAIPGAEVITLPYPLLLQKNARDALGIKLEGNVVIIDEAHNVM 285
Query: 297 DIARDAGSVDI 307
D + + +I
Sbjct: 286 DAVANVYAAEI 296
Score = 86.3 bits (212), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 137/353 (38%), Gaps = 100/353 (28%)
Query: 458 LSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGT----CLEAPHVI--- 510
LS L+P F +A + ++IL GT+SP + + L F T L HVI
Sbjct: 447 LSYLLLSPTNAFSSIASSARAVILAGGTMSPFEDYKAHLFPSFPTDKITTLSCGHVIPSS 506
Query: 511 -----------------------DVDLQ-------------VLTSVISTGPDNYPLNASY 534
+ Q L ++ S PD + +
Sbjct: 507 NLFGWTLASTTPTTPGTTNADSFEFSFQKRREPGMIRQLGLALLNICSVVPDGVVV---F 563
Query: 535 KTADGYKLMEKLCNRWR------ETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSI 588
+ GY ++++ W+ + W RL KK +F E KGG ED VL+ Y ++I
Sbjct: 564 FPSHGY--LDEVVAAWQTQETPTQPPLWDRLAGKKAVFRETKGGVSED---VLQQYSDAI 618
Query: 589 S-----------QGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVG 637
GS+ A + +R G L+ + + + + L C +VVG
Sbjct: 619 LFPAAAAAPPSLGGSQQAATKPRRPG--GALLLSVVGGKLSEGINFSDRLGRC--VVVVG 674
Query: 638 IPFPNINDIQVSLKKKYNDTYRSSKNLL----------------------------SGNE 669
+P+ NIN + +Y + + + + +
Sbjct: 675 LPYANINSPDWKARLEYIEATEMERLMEGEGKGKGEGGVGGAPPRGEAEARALAKQAARD 734
Query: 670 WYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQ 722
+Y N RA+NQ+IGR IRHR DY A++L+D RF ER + + W+R +++
Sbjct: 735 FYENACMRAVNQSIGRAIRHRADYAAVVLVDRRFATERIKGKLPGWIRAGMEE 787
>gi|195162259|ref|XP_002021973.1| GL14395 [Drosophila persimilis]
gi|194103871|gb|EDW25914.1| GL14395 [Drosophila persimilis]
Length = 861
Score = 100 bits (248), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 133/316 (42%), Gaps = 67/316 (21%)
Query: 463 LNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEA------PHVIDVDLQV 516
L+PA F D+ + +I++ GT+ P +L F C E HV+ D V
Sbjct: 573 LDPAEHFADILSEARAIVIAGGTMQPTQELKEQL---FARCPERLVERFYSHVVPPD-AV 628
Query: 517 LTSVISTGPDNYPLNASYKTADGYKLMEKL-------CNRWRETGQWSRLNAKKPLFVEP 569
L V++ GP L SY ++++L CN V P
Sbjct: 629 LPFVVAKGPTGASLCFSYAQRGTPAMLKELSMVLQNLCN------------------VLP 670
Query: 570 KG-----GSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQEN----AN 620
G S E + V H S G + RKKR+ RE + + + Q
Sbjct: 671 GGVVCFLPSYEYLDTVHTHLEQS---GGLQNIARKKRIFRESSGAADQLLQQYAEAIAVP 727
Query: 621 KKGASFLAVCRGKI---------------VVGIPFPNINDIQVSLKKKYNDTYRSSKNLL 665
K GA LAV GK+ VVG+P+PN N ++ + +Y D S
Sbjct: 728 KGGALLLAVVGGKLSEGLNFADDLGRAVLVVGLPYPNRNAPELQQRMRYLDERLGSG--- 784
Query: 666 SGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYD- 724
+GNE+Y N +A+NQ IGR +RH DY + LLDER+ R R + +W+ + I + +
Sbjct: 785 AGNEYYENICMKAVNQCIGRSVRHIRDYACVFLLDERYASARIREKLPEWIARHIFEPNG 844
Query: 725 -SFDASLEGLKSFFRD 739
+F A FF++
Sbjct: 845 VAFGAVQARTARFFKN 860
Score = 83.2 bits (204), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 96/183 (52%), Gaps = 28/183 (15%)
Query: 146 IFYASRTHSQISQVISEYKKTAYR--VPMAVLASRKHYCTNKYVRDKEN---IDEEC--- 197
IF+ SRTHSQ++Q+++E +KT + V L SR+ C N VR N I+E C
Sbjct: 196 IFFCSRTHSQLAQIVAELRKTPHGAWVRCVSLGSRQQLCINPQVRKLRNVGLINERCLDM 255
Query: 198 -------------KLLLGDRNL--GCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQ 242
+L G CP FK KV SL+ E DIE+L G
Sbjct: 256 ARSKAPANPSKKSRLAAGSAASLSRCP-FKAPAKVE---SLRDVALCEPLDIEELAVEGT 311
Query: 243 VVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIED-IARD 301
GCSYYA+RS DDAQLV PY ++ R + +D++G+++I+DEAHN+ D IA+
Sbjct: 312 ACGGCSYYASRSAQDDAQLVLLPYQLLLQRSARQQLGIDLRGSVVIVDEAHNLLDSIAQL 371
Query: 302 AGS 304
GS
Sbjct: 372 HGS 374
Score = 50.4 bits (119), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Query: 21 GGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
G FP+ PY Q M + S L+R Q + ESPTGTGKSL+L C L W
Sbjct: 14 GASDFGFPFAPYAIQEQLMQELFSVLERRQ-----VGIFESPTGTGKSLTLTCGALTW 66
>gi|125983388|ref|XP_001355459.1| GA10980 [Drosophila pseudoobscura pseudoobscura]
gi|54643775|gb|EAL32518.1| GA10980 [Drosophila pseudoobscura pseudoobscura]
Length = 861
Score = 100 bits (248), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 133/316 (42%), Gaps = 67/316 (21%)
Query: 463 LNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEA------PHVIDVDLQV 516
L+PA F D+ + +I++ GT+ P +L F C E HV+ D V
Sbjct: 573 LDPAEHFADILSEARAIVIAGGTMQPTQELKEQL---FARCPERLVERFYSHVVPPD-AV 628
Query: 517 LTSVISTGPDNYPLNASYKTADGYKLMEKL-------CNRWRETGQWSRLNAKKPLFVEP 569
L V++ GP L SY ++++L CN V P
Sbjct: 629 LPFVVAKGPTGASLCFSYAQRGTPAMLKELSMVLQNLCN------------------VLP 670
Query: 570 KG-----GSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQEN----AN 620
G S E + V H S G + RKKR+ RE + + + Q
Sbjct: 671 GGVVCFLPSYEYLDTVHTHLEQS---GGLQNIARKKRIFRESSGAADQLLQQYAEAIAVP 727
Query: 621 KKGASFLAVCRGKI---------------VVGIPFPNINDIQVSLKKKYNDTYRSSKNLL 665
K GA LAV GK+ VVG+P+PN N ++ + +Y D S
Sbjct: 728 KGGALLLAVVGGKLSEGLNFADDLGRAVLVVGLPYPNRNAPELQQRMRYLDERLGSG--- 784
Query: 666 SGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYD- 724
+GNE+Y N +A+NQ IGR +RH DY + LLDER+ R R + +W+ + I + +
Sbjct: 785 AGNEYYENICMKAVNQCIGRSVRHIRDYACVFLLDERYASARIREKLPEWIARHIFEPNG 844
Query: 725 -SFDASLEGLKSFFRD 739
+F A FF++
Sbjct: 845 VAFGAVQARTARFFKN 860
Score = 83.6 bits (205), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 75/201 (37%), Positives = 104/201 (51%), Gaps = 32/201 (15%)
Query: 146 IFYASRTHSQISQVISEYKKTAYR--VPMAVLASRKHYCTNKYVRDKEN---IDEEC--- 197
IF+ SRTHSQ++Q+++E +KT + V L SR+ C N VR N I+E C
Sbjct: 196 IFFCSRTHSQLAQIVAELRKTPHGAWVRCVSLGSRQQLCINPQVRKLRNVGLINERCLDM 255
Query: 198 -----------KLLLGDRNLG----CPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQ 242
K L + CP FK KV SL+ E DIE+L G
Sbjct: 256 ARSKAPANPSKKSRLAAESAASLSRCP-FKAPAKVE---SLRDVALCEPLDIEELAVEGT 311
Query: 243 VVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIED-IARD 301
GCSYYA+RS DDAQLV PY ++ R + +D++G+++I+DEAHN+ D IA+
Sbjct: 312 ACGGCSYYASRSAQDDAQLVLLPYQLLLQRSARQQLGIDLRGSVVIVDEAHNLLDSIAQL 371
Query: 302 AGSVDIDEDVLLKLQMELEQV 322
GS E +L++ EQV
Sbjct: 372 HGS----ELTRSQLELAREQV 388
Score = 50.4 bits (119), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Query: 21 GGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
G FP+ PY Q M + S L+R Q + ESPTGTGKSL+L C L W
Sbjct: 14 GASDFGFPFAPYAIQEQLMQELFSVLERRQ-----VGIFESPTGTGKSLTLTCGALTW 66
>gi|299116766|emb|CBN74879.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1076
Score = 100 bits (248), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 144/323 (44%), Gaps = 47/323 (14%)
Query: 457 TLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSEL-------GVQFGTCLEAPHV 509
++ LNPAV F ++ + + +++L GT+ P +L V+ +C HV
Sbjct: 759 SVKFLMLNPAVHFDEIVQKARALVLVGGTMQPTGDLVRQLFSSVEPSRVEVFSC---GHV 815
Query: 510 IDVDLQVLTSVISTGPDNYPLNASY--------------------KTADG--------YK 541
I + +L +S GP N ++ K G Y
Sbjct: 816 IPRE-NLLPLCVSKGPSGKTFNFTFHRRGTDEQLDELGRLMTNVCKLVPGGVVCFLASYG 874
Query: 542 LMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGS-KCAVVRKK 600
++++ RW+ +G +L+ K +F EP+ S +D + VL+ + + G+ K
Sbjct: 875 YLDQVLQRWKASGTLRQLSKLKSVFSEPR--SAKDVDAVLREFSLAARAGAWKPTTSGGG 932
Query: 601 RVKREGNNDLNTIESQENANKKGASF---LAVCRGKIVVGIPFPNINDIQVSLKKKYNDT 657
+ + +G +F LA C ++VG+P+P+ D ++ K Y D
Sbjct: 933 GGGGSSSGGGLLLSVVGAKMSEGINFSDDLARC--VVMVGLPYPDKRDAELKQKMAYLDE 990
Query: 658 YRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLR 717
S +G E+Y + RA+NQ+IGR IRH DY +I+L+DER+++++ + W+
Sbjct: 991 ASPSSRGRAGREYYSSICMRAVNQSIGRSIRHAGDYASILLVDERYKDDQVVRLLPGWIA 1050
Query: 718 KSIKQYDSFDASLEGLKSFFRDV 740
+ + + +F L+ FF ++
Sbjct: 1051 ERVVKPANFGQCFVSLRRFFAEM 1073
Score = 67.4 bits (163), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 44/65 (67%)
Query: 231 VHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILD 290
V DIE+L +G+ C+YY AR A AQLV PY+ +++ R AM V ++GA++++D
Sbjct: 413 VRDIEELAALGKEEGTCAYYGARKAASLAQLVVMPYAALLSREARAAMGVRLEGAVVVVD 472
Query: 291 EAHNI 295
EAHNI
Sbjct: 473 EAHNI 477
Score = 55.1 bits (131), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 5/62 (8%)
Query: 25 VEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCKL 84
+ FP++PY Q M ++ STL+ + ESPTGTGKSLS++CS L W ++ +
Sbjct: 23 IPFPFEPYDVQKQLMRKIYSTLENGG-----IGIFESPTGTGKSLSVICSALQWLKDAEA 77
Query: 85 KN 86
K+
Sbjct: 78 KD 79
Score = 43.9 bits (102), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
Query: 146 IFYASRTHSQISQVISEYKKTAYR--VPMAVLASRKHYCTNKYV 187
I Y SRTHSQ SQ ++E KKTA+ V A L SR+ C N+ V
Sbjct: 254 ILYVSRTHSQTSQFVNEVKKTAFAKGVRCASLGSRRTLCGNERV 297
>gi|358383392|gb|EHK21058.1| hypothetical protein TRIVIDRAFT_59546 [Trichoderma virens Gv29-8]
Length = 872
Score = 100 bits (248), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 145/347 (41%), Gaps = 68/347 (19%)
Query: 448 KNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFG----TC 503
K G L+ L+P F +A + ++IL GT+SP + +L T
Sbjct: 528 KTQGATADVKLTYLLLSPTHAFSSIASSARAVILAGGTMSPFQDYKDQLFPTLDNTKVTS 587
Query: 504 LEAPHVIDVDLQVLTSVISTGPDNYPLNASYK---------------------TADG--- 539
L HVI + + ++ ST ++ P S+K DG
Sbjct: 588 LSCGHVIPAENLCVWTLASTNTESPPFEFSFKHRGNKEMMNQLGLAILNVCNIVPDGVVV 647
Query: 540 ----YKLMEKLCNRW--RETGQ----WSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSIS 589
Y ++++ W R+ G W RL A+K +F + KG S E+ VL+ Y +I
Sbjct: 648 FFPSYGYLDEIIAVWQQRQGGSSQTTWDRLQARKFVFRDTKGESSEE---VLRDYSEAI- 703
Query: 590 QGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVS 649
R K G L+ + + + + L C +VVG+P+PNI
Sbjct: 704 -----LGTRPAGDKHTGALLLSVVGGKMSEGINFSDRLGRC--VMVVGLPYPNIASPDWK 756
Query: 650 LKKKYNDTYRSSKNLLSGN--------------EWYCNQAFRALNQAIGRCIRHRFDYGA 695
K +Y ++ ++ + G ++Y N RA+NQ+IGR IRHR DY A
Sbjct: 757 AKLEYIESTTEARLIKEGQSSSDATAQAKQAARDFYENACMRAVNQSIGRAIRHRGDYAA 816
Query: 696 IILLDERFQEERNRAHISKWLRKSIKQYDSFDASL----EGLKSFFR 738
IIL+D R+ R R + W++ ++Q DS + L L FFR
Sbjct: 817 IILVDRRYGTPRIRNKLPGWIQNGLQQ-DSHEKGLGVLMGALGGFFR 862
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 81/174 (46%), Gaps = 22/174 (12%)
Query: 146 IFYASRTHSQISQVISEYKKTAYR------------------VPMAVLASRKHYCTNKYV 187
I+Y SRTHSQ+SQ I+E ++ + V + L+SR+ C N V
Sbjct: 206 IYYTSRTHSQLSQFITELRRPVFPSSLPPSVAKGSDVSSTEPVKLLPLSSRQKLCINPSV 265
Query: 188 R---DKENIDEEC-KLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQV 243
+ I++ C +L + C + + + DIEDL +G+
Sbjct: 266 ARLGSVQAINDRCTELQQAKSSTKCSFVPKEELLSQTHQFRDSALATLPDIEDLHLLGKS 325
Query: 244 VRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIED 297
+ C YYA+R A+++ PY ++ R A+ + ++G ++I+DEAHNI D
Sbjct: 326 LSICPYYASRVALPGAEIITLPYPLLLQRSAREALGIKLEGNVVIIDEAHNILD 379
Score = 57.4 bits (137), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 17 AYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
A+ + + P+ PY Q FM V L+ Q G +LESPTGTGKSLSL+C++L
Sbjct: 11 AHELSSLDFHHPFTPYDVQNQFMQTVYQVLETGQ--GQV-GILESPTGTGKSLSLICASL 67
Query: 77 AWQQNCKLKNQLANI 91
W +N K Q A +
Sbjct: 68 TWLRNHKATRQEAEL 82
>gi|242025010|ref|XP_002432919.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212518428|gb|EEB20181.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 852
Score = 99.8 bits (247), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 99/179 (55%), Gaps = 33/179 (18%)
Query: 146 IFYASRTHSQISQVISEYKKTAY---RVPMAVLASRKHYCTNKYVRDKEN---IDEECKL 199
IF SRTHSQ+SQ++ E +K+ Y ++ +A LASR++YC N+ V ++ I+E+C+
Sbjct: 207 IFLCSRTHSQLSQLVRELQKSPYNDLKIRVASLASRQNYCINENVLKLKHLPLINEKCQE 266
Query: 200 LLGDR-------------------NLGCPQFK--NVHKVRGHPSLQKGGCHEVHDIEDLV 238
L N GCP + N+ ++ H L E+ D+E L+
Sbjct: 267 LHDKNKSKTTKTSENGEVLKRQKANTGCPYYNHSNIEDLK-HTLLS-----EILDVEQLL 320
Query: 239 NVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIED 297
+ G GC YYA+R DDAQ++ PY+ I++ R A +++K +++I+DEAHN+ D
Sbjct: 321 HKGNKFNGCPYYASRYAVDDAQVIIVPYNTILHDSTRKACGINLKDSVVIIDEAHNLLD 379
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 140/312 (44%), Gaps = 61/312 (19%)
Query: 455 THTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFG------TCLEAPH 508
T TL LNPA F+D+ + + S+IL GT+ P++ F+ +L G H
Sbjct: 568 TSTLKFLLLNPASHFEDIVKNARSVILAGGTMQPISEFTDQLFYLAGGSPDRLKVFTCGH 627
Query: 509 VIDVDLQVLTSVISTGPDNYPLNASYKTADGYKLMEKLCNRWRETGQWSRLNAKKPLFVE 568
V+ + +L ++ +GP + SY+ +++++L V
Sbjct: 628 VVSKE-NILPIIVPSGPTGKVFDFSYQNRKNVEILDELGRLLVNISN-----------VV 675
Query: 569 PKG-----GSQEDFEIVLKHYYNS---ISQGSKCAVVRKKRVKREGNNDLNTIESQENAN 620
P G S E +H+ + + K V+R+ K+ D + E
Sbjct: 676 PAGIVCFFPSYEYENFSYQHFEKTGVIMKLLKKKKVLREP--KKTNKVDEVLRDYSEAVK 733
Query: 621 KKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKKYNDTYRSSKNLL 665
K GA +V GK IVVG+P+PN+ + + LK+K N
Sbjct: 734 KTGALLFSVVGGKLSEGLNFNDDLGRCIIVVGLPYPNLTNPE--LKEKMN---------- 781
Query: 666 SGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDS 725
Y NQ A+NQ+IGR +RH+ DY +++L+D+RF + + + +W+++S+++ +
Sbjct: 782 -----YLNQTV-AVNQSIGRSVRHKNDYASVLLIDQRFSKTKCINALPQWIQESLQKGER 835
Query: 726 FDASLEGLKSFF 737
F + ++ L +FF
Sbjct: 836 FGSVIKLLANFF 847
Score = 46.6 bits (109), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 7/64 (10%)
Query: 27 FPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNC--KL 84
FP+ PY Q M + L+ G + ESPTGTGKS+SL+C +L W + ++
Sbjct: 16 FPFNPYLIQNDLMKNLYEALE-----GKKLGIFESPTGTGKSMSLICGSLKWLLDAQERI 70
Query: 85 KNQL 88
KN L
Sbjct: 71 KNDL 74
>gi|320165089|gb|EFW41988.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
Length = 950
Score = 99.8 bits (247), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 97/186 (52%), Gaps = 14/186 (7%)
Query: 146 IFYASRTHSQISQVISEYKKTAY--RVPMAVLASRKHYCTNKYVRD---KENIDEECKLL 200
I+Y SRTHSQ++Q + E +K+ + + VL SRK+ C N VR E I+E C L
Sbjct: 234 IYYCSRTHSQLNQFVQEVRKSPFGETTKVVVLGSRKNLCVNDDVRKLEAVERINERCDDL 293
Query: 201 LGDRNL-----GCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSM 255
+ + GCP N +L+ DIE+LVN G+ + C+YYA+R
Sbjct: 294 RKNASKSKEAKGCPYLTN----DSVSTLRDSILVHTTDIEELVNRGKKMGACAYYASRRA 349
Query: 256 ADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKL 315
A LV PY +++ R A+ +++ ++I+DEAHN+ + D SV I V+
Sbjct: 350 IRAAHLVALPYQMLLHHSTREALGINLSNQVVIVDEAHNVMETLNDIYSVTITLAVIRAA 409
Query: 316 QMELEQ 321
Q +LEQ
Sbjct: 410 QSQLEQ 415
Score = 82.4 bits (202), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 133/345 (38%), Gaps = 103/345 (29%)
Query: 457 TLSLWCLNPAVVFKDVAELSLSIILTSGT--------------------LSPMNSFSSEL 496
TL LNP V F+DV + ++IL GT L P+ S S+
Sbjct: 599 TLRFVMLNPGVHFRDVVGSARAVILAGGTMQPTDAFANQLLAPPSHPDLLVPVASASAAS 658
Query: 497 GVQFGTCLEAP---------------HVIDVD-LQVLTSVIS-TGPDNYPLNASYK---- 535
F + AP H+I V+ LQ + TG + + ++
Sbjct: 659 AQPFASVAAAPTSTSSTPETQVFSCGHIIPVENLQAVALAFGPTGEVKFDFSFRFRHDTR 718
Query: 536 ---------------TADG-------YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGS 573
+G Y M K+ +RWR+T ++ KK +F EP+
Sbjct: 719 VMDELGRALCDIVAWVPEGVVCFFQSYDYMAKVLDRWRQTEVLQQVQLKKRVFQEPRVAG 778
Query: 574 QEDFEIVLKHYYNSISQGSK----CAVVRKKRVKREGNNDLNTIESQENANKKGASFLAV 629
D VL+ Y I G+ C V K EG N + +
Sbjct: 779 NVD--SVLREYSECIRAGNGAILFCVVGGKLS---EGINFSD----------------GL 817
Query: 630 CRGKIVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLS---------------GNEWYCNQ 674
R ++VG+PF N+ +++ K +Y + + L S G E+Y N
Sbjct: 818 GRCVVMVGLPFANMYSTELNEKMRYLNEQAKVRALASSKTNKLPPSFDETAAGEEFYLNL 877
Query: 675 AFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKS 719
RA+NQ+IGR IRH DY I+LLD RF + +A + +W+ +S
Sbjct: 878 CMRAVNQSIGRAIRHSKDYATILLLDHRFLQPHIQAKLPRWIAES 922
>gi|351702333|gb|EHB05252.1| Putative ATP-dependent RNA helicase DDX11-like protein
[Heterocephalus glaber]
Length = 953
Score = 99.8 bits (247), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 165/763 (21%), Positives = 270/763 (35%), Gaps = 256/763 (33%)
Query: 146 IFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEECKLLLGDRN 205
I+Y SRTHSQ++Q + E + C N+ VR ++ L+ DR
Sbjct: 279 IYYCSRTHSQLAQFVQE-----------------NLCVNEDVRSLGSVQ-----LINDRC 316
Query: 206 LGCPQFKNVHKVRGHPSLQK-------GGCH----------------EVHDIEDLVNVGQ 242
+ + ++ K R K C EV D+E LV +G+
Sbjct: 317 VEIQRSQHKSKSRAEEEKPKRRRQEARAACPFYNHEQMQLLRDEILVEVRDVEQLVALGK 376
Query: 243 VVRGCSY----------------YAARSMAD---DAQLVFCPYSYIINPVIRGAMEVDIK 283
R C Y Y R A Q+V ++ + I G V++
Sbjct: 377 EARACPYYGSRLAIAAAQLVVLPYPTRQAAGIRLQGQVVIIDEAHNLIDTITGIHSVEVT 436
Query: 284 GA------------------------------ILILDEAH------------NIEDIARD 301
G+ IL L E N +++
Sbjct: 437 GSQLCQAHSQLLQYTERYRKRLKAKNLMYIKQILYLLEKFVAVLGGDIRQNPNTRSLSQT 496
Query: 302 AGSVDIDEDVLLKLQMELEQVCSVNPMIYQPLIE---MTQDLVGWIERRKATLAKRE--- 355
+ D L + QV ++N Q E +++ L G+ ER A L +
Sbjct: 497 GTELKTINDFLFE-----SQVDNINLFKVQRYCEKSKVSRKLCGFTERYGAVLPPPQQQS 551
Query: 356 ----FQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSV 411
QHF L+ LQ + P L E A++ A+ +
Sbjct: 552 RLAGLQHF---------LQSLQPSTTEAPAAP-LEEAEPGAVRAAS------------PL 589
Query: 412 ITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKD 471
+ +EG S+LT +++G + Q +L + +L LNPAV F
Sbjct: 590 MHVEGFLSALTTA-NQDGRVILSRQGSLSQ--------------SSLKFLLLNPAVHFAQ 634
Query: 472 VAELSLSIILTSGTLSPMNSFSSEL----GVQFGTCLE--APHVIDVDLQVLTSVISTGP 525
V + ++++ GT+ P++ F +L GV+ +E HVI D +L V+ +GP
Sbjct: 635 VVKECRAVVIAGGTMQPVSDFREQLLACAGVEAERVVEFSCGHVIPPD-NILPLVLCSGP 693
Query: 526 DNYPLNASYKTADGYKLMEK-------LCN---------------------RWRETGQWS 557
N L +Y+ + +M++ LCN W ++G +
Sbjct: 694 TNQQLEFTYQKREVPAMMDEAGRILCNLCNVVPGGLVCFFPSYEYQHQVLAHWGKSGLLT 753
Query: 558 RLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQE 617
RL +K +F EPK Q E VL Y I CA +
Sbjct: 754 RLAVRKKIFQEPKRAGQ--VEQVLAAYARCIE---SCA--------------------RA 788
Query: 618 NANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKKYNDTYR--S 660
+ GA LAV GK ++VG+P+P+I ++ K Y D +
Sbjct: 789 SGPGTGALLLAVVGGKMSEGINFSDDLGRCVVMVGMPYPSIRAPELQEKMAYLDQRLPGT 848
Query: 661 SKNLLSGNEWYCNQAFRALNQAIG---------------------RCIRHRFDYGAIILL 699
+ G N +A+NQ++G R IRH+ D+ +I+LL
Sbjct: 849 PGQVPPGKALVENLCMKAVNQSVGEPGAVLALDAQPGTDGQRGGGRAIRHQRDFASIVLL 908
Query: 700 DERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFRDVKG 742
D+R+ A + W+R ++ +F A+ L+ F R+ G
Sbjct: 909 DQRYARPPVLAKLPAWIRDRVEVKATFGAAFAALRKFHREKVG 951
Score = 61.6 bits (148), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 50/97 (51%), Gaps = 15/97 (15%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
VGGI FP+ PY Q FM + L+ + + ESPTGTGKSLSL+C L+W
Sbjct: 25 VGGIHFPFPFPPYSIQKDFMAELYQVLEAGK-----IGIFESPTGTGKSLSLICGALSWL 79
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQ 116
++ + K Q + + + DP G G +PE +
Sbjct: 80 RDFEQKKQ-------QEEVRCLLDP---GAGPLPEGR 106
>gi|322692960|gb|EFY84841.1| DNA repair helicase RAD3 [Metarhizium acridum CQMa 102]
Length = 716
Score = 99.8 bits (247), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 149/665 (22%), Positives = 258/665 (38%), Gaps = 154/665 (23%)
Query: 175 LASRKHYCTNKYVRDKEN---IDEECKLLLG-------DRNLG---CPQFKNVHKVRGHP 221
L SRK+ C + V+ +++ +D C+ L DR C N+ + H
Sbjct: 33 LTSRKNLCLHPSVKREKSGSVVDARCRSLTAGFVKEKKDRGENVDVCIYHDNLDLLEPHN 92
Query: 222 SLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVD 281
+ G V + ++ G+ + C Y+ AR M +V Y Y+++P I + D
Sbjct: 93 LIPNG----VWTFDGILRHGEEHKQCPYFTARRMMQYCNVVIFSYHYLLDPKIAERVSRD 148
Query: 282 I-KGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQ---MELE-QVCSVNPMIYQPLIEM 336
K I++ DEAHNI+++ +A S DI ED L + LE ++ + + L
Sbjct: 149 FSKDCIVVFDEAHNIDNVCIEALSTDITEDSLRRASRGAQNLEHKITEMRDTDQEQLQNE 208
Query: 337 TQDLVGWIERRKATLAKREFQHFFSCWTGDKALRELQEANISR--------QCFPILLEC 388
Q LV + R+A A++E + + LRE NI R + F L+
Sbjct: 209 YQKLVQGL--READEARQEDAFMANPTLPEDLLREAVPGNIRRAEHFVAFLKRFIEYLKT 266
Query: 389 ATKAIKEATDTE-SELPHLSGMSVITLEGL------FSSLTYFFSRNGSHVSDYQ----- 436
K + ++T S L HL + I + L +SL + ++V DYQ
Sbjct: 267 RMKVRQVISETPPSFLAHLKEHTFIEKKPLRFCAERLTSLVR--TLELTNVEDYQPLQEV 324
Query: 437 ---------------LALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIIL 481
L + + ++ P L CL+ A+ + V E S+I+
Sbjct: 325 ATFATLVATYEKGFLLIFEPFESDTAEVPNP----ILHFTCLDAAIAIRPVFERFYSVII 380
Query: 482 TSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQ-VLTSVISTGPDNYPLNASYK----- 535
TSGT+SP+ + L F T ++ + + + + L +++ G D ++ S++
Sbjct: 381 TSGTISPLEMYPKML--DFSTVIQESYSMTLARRSFLPMIVTRGSDQASISTSFQVRNEP 438
Query: 536 ----------------TADG-------YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGG 572
T DG Y ME + + W+ G + K + VE
Sbjct: 439 SVVRNYGTLLIEFAKITPDGLVVFFPSYLYMESIISMWQGMGILDEVWKYKLILVETPDA 498
Query: 573 SQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRG 632
+ + L+ Y + G +GA L V RG
Sbjct: 499 QETS--LALETYRTACCNG------------------------------RGAILLCVARG 526
Query: 633 KI---------------VVGIPFPNINDIQVSLKKKY-NDTYRSSKNLLSGNEWYCNQAF 676
K+ +G+PF + + ++ +TYR + N++ A
Sbjct: 527 KVSEGIDFDHQYGRTVLCIGVPFQYTESRILKARLEFLRETYR-----IKENDFLSFDAM 581
Query: 677 RALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYD---SFDASLEGL 733
R Q +GR +R + DYG ++L D RFQ + RA + KW+ + + D S D ++
Sbjct: 582 RHAAQCLGRVLRGKDDYGIMVLADRRFQ--KKRAQLPKWINQGLLDVDTNLSTDMAVSSA 639
Query: 734 KSFFR 738
+ F R
Sbjct: 640 RRFLR 644
>gi|449674800|ref|XP_002169756.2| PREDICTED: probable ATP-dependent RNA helicase DDX11-like [Hydra
magnipapillata]
Length = 827
Score = 99.8 bits (247), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 98/183 (53%), Gaps = 33/183 (18%)
Query: 137 NVKKKMTPTIFYASRTHSQISQVISEYKKTAY--RVPMAVLASRKHYCTNKYVRDKEN-- 192
N++++ IFY SRTHSQ+SQ + E +K+ Y RV + VL SR++YC N+ V ++N
Sbjct: 434 NIEEEYCTKIFYCSRTHSQLSQFVHEVQKSPYANRVKLVVLGSRQNYCINEKVNQQKNVY 493
Query: 193 -IDEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYA 251
I+E+C L+ EV DIE +V +G+ + C YY
Sbjct: 494 QINEKCLDLM----------------------------EVQDIEQIVKLGKDLNTCPYYG 525
Query: 252 ARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDV 311
R AQLV PY +++ R ++ +++K ++I+DEAHN+ + + SV+I ++
Sbjct: 526 TRHTIPKAQLVVLPYQTLLHRGTRESVGINVKDCVVIIDEAHNLIETINNIHSVEIRQNQ 585
Query: 312 LLK 314
+ K
Sbjct: 586 IHK 588
Score = 55.1 bits (131), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 14/139 (10%)
Query: 23 IQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNC 82
I EFP++PY Q FM + TL + + ESPTGTGKSLSL+C +L W +
Sbjct: 224 IDFEFPFEPYDIQKSFMSTLYETLQNDKI-----GIFESPTGTGKSLSLICGSLRWLFDY 278
Query: 83 KLKNQ--LANISHSKPDTEAVTDPLANG---GGFIPESQPSTIPPSTNGQTAQVAMNN-- 135
+++ + + +I + E D AN F +PS + + A V +
Sbjct: 279 EIEKEEKIKSIINFSSAVERTNDDKANDEEKKVFFFLQEPSWVTDFFKQKAANVQLEKLK 338
Query: 136 --KNVKKKMTPTIFYASRT 152
+ + K M + Y +T
Sbjct: 339 GIEKILKSMERHMLYLDQT 357
Score = 45.4 bits (106), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 70/166 (42%), Gaps = 37/166 (22%)
Query: 457 TLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFG------TCLEAPHVI 510
++ LNPAV F D+ + S+IL GT++P+ L G T HVI
Sbjct: 658 SIKFLMLNPAVHFIDIIKDCKSLILAGGTMAPVGEIKDLLFYTSGIPSSRITEFSCGHVI 717
Query: 511 DVDLQVLTSVISTGPDNYPLNASYKTADGYKLMEKL-------CN--------------- 548
+L + GP + ++ +Y++ + + L+++L C+
Sbjct: 718 PSS-NLLVLALQKGPSSMDMSFTYQSRNNFDLVDELGRLLVNICSVVPGGIVCFFPSYDY 776
Query: 549 ------RWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSI 588
RW T ++++++KK +F EPK D VL Y N I
Sbjct: 777 EEFVYKRWINTSLFNKIDSKKKVFREPKSAMLCD--QVLSEYTNMI 820
>gi|449300032|gb|EMC96045.1| hypothetical protein BAUCODRAFT_514453 [Baudoinia compniacensis
UAMH 10762]
Length = 831
Score = 99.8 bits (247), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 152/665 (22%), Positives = 240/665 (36%), Gaps = 147/665 (22%)
Query: 144 PTIFYASRTHSQISQVISEYKKTAY------------------RVPMAVLASRKHYCTNK 185
P I++ SRTHSQ+SQ + E ++ V L SRK+ C N
Sbjct: 195 PKIYFCSRTHSQLSQFVRELRRVQLPPSMPPGAEAKLDEHVHEAVKQVPLGSRKNLCINP 254
Query: 186 YV---RDKENIDEECKLLLGDRNLG---CPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVN 239
V D+ I+E C L + CP + + + DIEDL
Sbjct: 255 KVIKLGDQTAINERCVELQQTKTPAEHRCPYLPSKDNEDLVLDFRDHALARIRDIEDLAE 314
Query: 240 VGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIA 299
VG A+L CPY Y I A V + +L+ A + I+
Sbjct: 315 VG-----------------ARLGICPY-YASRTAIGAAELVTLPYPLLLQKSARDALGIS 356
Query: 300 RDAGSVDIDEDVLLKLQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHF 359
V IDE + S IY I D++ +ER K+++ Q F
Sbjct: 357 LRGQVVVIDE---------AHNLASAVEGIYSAKI---SDML--VERSKSSMLIY-LQRF 401
Query: 360 FSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVITLEGLFS 419
+ G + Q + T S L G+ + + L
Sbjct: 402 RNRLKGANRVYVTQVVRVLDSLLSFFASLLNAPRTSGTVEASRLLAGKGVDQVNISKLIH 461
Query: 420 SLTYFFSRNGSHVSDYQLALQKYIKRDS---KNPGGNWTHTLSL---------------- 460
LT S+ V Y L IK+DS K+P N T +L
Sbjct: 462 FLT--VSKLARKVEGYASHLT--IKQDSADNKSPVENTADTPALTHVQAFLATLVNPSSD 517
Query: 461 ----W------------CLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFG--T 502
W L+PA F+ + + + ++IL GT+SPM+ + L T
Sbjct: 518 GRFSWSIETGRRELQYMLLDPAEHFRGIVDETRAVILAGGTMSPMDDYQERLFPYLPSLT 577
Query: 503 CLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTAD------------------------ 538
H+I +L I+T + SYK+ +
Sbjct: 578 TFSCGHLIPPS-NLLVRTIATDAKG-TIELSYKSRNDATAVRIGDALLKVATYVQGGLVV 635
Query: 539 ---GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCA 595
Y +++L + W +RL K +F + + S E V K Y +I +K A
Sbjct: 636 FLPSYGFLQQLYDCWHAHSMIARLEQIKAVFWDSRTMSAE---AVFKAYTEAIYTSAKGA 692
Query: 596 VVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYN 655
++ L+ + + + + L C +VVG+PFPN+ + + +Y
Sbjct: 693 IL------------LSVLGGKLSEGINFSDDLGRC--VVVVGLPFPNLETPEWKARMQYL 738
Query: 656 DTYRSSKNLLSGN---EWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHI 712
D + L G E N RA+NQA+GR IRH+ D+ +I+L+D R+ + R R +
Sbjct: 739 DEKAVGRGELKGKASREHAENVCMRAVNQAVGRVIRHKDDWASIVLMDSRYLQSRIRQKL 798
Query: 713 SKWLR 717
W++
Sbjct: 799 PGWIK 803
Score = 51.6 bits (122), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 41/75 (54%), Gaps = 8/75 (10%)
Query: 28 PYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCKLK-- 85
P+QPY Q FM + ++ DG + ESPTGTGKSLSL+C++L W + K K
Sbjct: 9 PFQPYDIQQQFMEAMYDCIE----DGKV-GIFESPTGTGKSLSLICASLTWLREYKRKAF 63
Query: 86 -NQLANISHSKPDTE 99
LA I+ D E
Sbjct: 64 DEALATIAIDDDDPE 78
>gi|357114542|ref|XP_003559059.1| PREDICTED: DNA repair helicase UVH6-like [Brachypodium distachyon]
Length = 752
Score = 99.4 bits (246), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 148/739 (20%), Positives = 269/739 (36%), Gaps = 180/739 (24%)
Query: 122 PSTNGQTAQVA--MNNKNVKKKMTPT-IFYASRTHSQISQVISEYKKTAYRVPMA----- 173
P+ G+TA + + + + P +FY +RT ++ + ++E + +P A
Sbjct: 43 PTGTGKTAALISLITSYALANPSRPLRLFYCTRTVHEMEKTLAELRLLFSHLPPADACRL 102
Query: 174 ---VLASRKHYCTNKYVRDKENIDEECKLLLG---------DRNLG---CPQFKNVHKVR 218
L+SRK+ C + V +D C+ L DR C F+
Sbjct: 103 LALGLSSRKNLCVHPQVSASGAVDTGCRRLTASWVCEKAAYDRESATPLCDYFETFDAAA 162
Query: 219 GHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAM 278
L V+ + DL ++G+ R C Y+ AR M A +V Y Y+++P + +
Sbjct: 163 RKGDLALYIQPGVYTLADLRSLGRERRICPYFLARHMVKHANVVVYSYQYLLDPRVASIV 222
Query: 279 EVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQVCSVNPMIYQPLIEMT 337
++ K +++ DE HNI+++ +A SV I + + + L +
Sbjct: 223 SSEMQKDCVVVFDEVHNIDNVCIEALSVSIRKQTIQGAKGNLRHISQ------------- 269
Query: 338 QDLVGWIERRKATLAKR---EFQHFFS------------CWTG-----DKALRELQEANI 377
I+R KAT A R E++ W D L+E NI
Sbjct: 270 -----QIDRFKATDASRLNAEYRRLVDGLAQRGNLPISDAWLANLALPDDILKEAVPGNI 324
Query: 378 SR-QCFPILLECATKAIKEATDTE-----------SELPHLSGMSVITLEGLFSSLTY-- 423
+ + F +L + + E DTE + + L+G+ TL L+ L
Sbjct: 325 RKAEHFLTVLWRLVRNLDERVDTENVVNERPVSFATSIYSLAGIETTTLRFLYDRLQSLL 384
Query: 424 -------------------FFSRNGSHVSDYQLALQKYIKR--DSKNPGGNWTHTLSLWC 462
F + G++ + + ++ Y R D ++P + L C
Sbjct: 385 LTLEITDTDEFMHIQKICDFATLIGTYKRGFSIIIEPYDDRMPDIRDP------VIQLSC 438
Query: 463 LNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQ-VLTSVI 521
+ ++ + V ++++TSGTLSP++ + L F + + + + V+
Sbjct: 439 HDASLAIQPVFNRFQTVVITSGTLSPIDLYPRLL--NFNPVISRSFTMSLTRDCICPMVL 496
Query: 522 STGPDNYPLNASY---------------------KTADG-------YKLMEKLCNRWRET 553
+ G D P++ + DG Y M+ + + W +
Sbjct: 497 TRGSDQLPVSTKFDMRSDPGVVRNYGRLLLEMASAVPDGIVCFFVSYSYMDGIVSSWNDM 556
Query: 554 GQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTI 613
G + K +F+E + + L +Y + G
Sbjct: 557 GILQEIMQHKLVFIETPDVVET--TLALDNYRKACDCG---------------------- 592
Query: 614 ESQENANKKGASFLAVCRGKIVVGIPFPNIND---------IQVSLKK--KYNDTYRSSK 662
+GA F +V RGK+V GI F Q +L K + Y
Sbjct: 593 --------RGAVFFSVARGKVVEGIDFNRHYGRLVIMFGVPFQYTLSKILRARLEYLRET 644
Query: 663 NLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQ 722
+ + ++ A R Q +GR IR + DYG +I D+R+ R+ + W+R +
Sbjct: 645 SQIQEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWIRSHLHD 704
Query: 723 YD---SFDASLEGLKSFFR 738
S D +L + F R
Sbjct: 705 AHLNLSTDMALHTAREFLR 723
>gi|341878944|gb|EGT34879.1| hypothetical protein CAEBREN_04447 [Caenorhabditis brenneri]
Length = 537
Score = 99.4 bits (246), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 129/550 (23%), Positives = 223/550 (40%), Gaps = 101/550 (18%)
Query: 263 FCPYSY--IINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVL---LKLQM 317
FC +S N V R +D+K ++ILDEAHN+ S +I E L LKL
Sbjct: 22 FCSFSVSNFKNYVSRNTWGIDLKDNVIILDEAHNVLSTINSLYSAEISEKSLALALKLIR 81
Query: 318 ELEQ-----VCSVNPMIYQPLIEMTQDLVGWIERRK----ATLAK--------------- 353
E + + + N + + L ++T ++ +++ T+A+
Sbjct: 82 EYNEKYKLRLKAKNLLYMKQLEQLTSKMITFLKSESKEDVMTMAQLSRNLNILGINLFKL 141
Query: 354 ----------REFQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESEL 403
++F F+ + ++ +E ++ ++ +L + K + A ++E
Sbjct: 142 ATYIEKTDLCKKFHGFYVQFQRNEVKKENEKPKLT-GIQKLLAKKDEKPEETAEESEPAP 200
Query: 404 PHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCL 463
P + +L+ SLT + D ++ + K + +P + L
Sbjct: 201 PKTVSSPLFSLKSFIDSLT-------NKCEDGRIIVDK-----TADPKFRYI------LL 242
Query: 464 NPAVVFKDVAELSLSIILTSGTLSPMNSFSSELG--------VQFGTCLEAPHVIDVDLQ 515
NPA +V + S +L GT+ P L ++ +C HVI+ D Q
Sbjct: 243 NPADRLAEVLKACRSTVLVGGTMEPAQLLVETLSRGSIGPDSIRRFSC---SHVIN-DSQ 298
Query: 516 VLTSVISTGPDNYPLNASYKTADGYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQE 575
+L I+ D P +Y+T + ++ L + Q L +FV
Sbjct: 299 LLAVTINKTVDGKPFRLTYQTRSLPETLKSLARSIQVLSQ--HLPNGVVVFV-----PSY 351
Query: 576 DFEIVLKHYYNSISQGSKCAVVRKKRV---KREGNNDLNTIESQENANKKGASFLAVCRG 632
DF LK I + RKK V R+ +D+ S+ KGA F AV G
Sbjct: 352 DFLFELKK--KMIETKILEQIERKKSVFTETRQSTSDVFKRFSEAAKTSKGAIFFAVIGG 409
Query: 633 K---------------IVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFR 677
K IV+G+PFPN +++ + ++ D+ + GN Y +
Sbjct: 410 KMSEGINFSDELGRAVIVIGLPFPNKTAVELRERMRFLDSQMPN----GGNMLYESLCMH 465
Query: 678 ALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFF 737
A+NQAIGR IRHR DY A+ L DERF ++ ++ +S W+ + F ++ ++FF
Sbjct: 466 AVNQAIGRAIRHRNDYAAVYLFDERFSQDSIKSKLSSWIGDRTQTNLGFTEIIQKSQAFF 525
Query: 738 RDVKGWVGKK 747
+ V KK
Sbjct: 526 KSNAEAVNKK 535
>gi|256091354|ref|XP_002581564.1| brca1 interacting protein C-terminal helicase 1 brip1 [Schistosoma
mansoni]
Length = 150
Score = 99.4 bits (246), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 83/151 (54%), Gaps = 6/151 (3%)
Query: 172 MAVLASRKHYCTNKYVRDKENIDEECK--LLLGDRNLGCPQFKNVHKVRGHPSLQKGGCH 229
M++L+SRKH C N + N+ + C LL G P+ K R L + G
Sbjct: 1 MSILSSRKHTCINPEISSTPNVTDSCHNLLLSGVCAYDLPR-KKSDLSRAVDKLDRSG-- 57
Query: 230 EVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILIL 289
DIEDLV + C Y+ +RS+A A ++FCPY Y+++P+ R A +++ I+IL
Sbjct: 58 -PWDIEDLVQALIPIPSCPYFCSRSLARSADIIFCPYDYLLDPLNRSATSLEVTDHIIIL 116
Query: 290 DEAHNIEDIARDAGSVDIDEDVLLKLQMELE 320
DEAHNIED +R+A S I E L + +LE
Sbjct: 117 DEAHNIEDASREAASFTITEQQLKSARDDLE 147
>gi|158301911|ref|XP_321585.4| AGAP001537-PA [Anopheles gambiae str. PEST]
gi|157012699|gb|EAA01808.4| AGAP001537-PA [Anopheles gambiae str. PEST]
Length = 910
Score = 99.4 bits (246), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 105/207 (50%), Gaps = 33/207 (15%)
Query: 120 IPPSTNGQTAQVAMNNKNVKKKMTPT-IFYASRTHSQISQVISEYKKTAYR--VPMAVLA 176
+P ++G + + + +++ P + + SRTHSQ+SQV+SE K+T + + + LA
Sbjct: 176 LPEESDGSDEETEADCEKDEEQYRPVQVIFCSRTHSQLSQVVSEVKETEHSKDLRLMSLA 235
Query: 177 SRKHYCTNKYVRDKEN---IDEECKLLL-------------GD--------RNL--GCPQ 210
SR+ C N VR ++ I+E C LL GD R L CP
Sbjct: 236 SRQSLCINADVRKLKSSTLINERCLELLNKGGKNKASAGDEGDDGRSVKKRRKLTQSCPY 295
Query: 211 FKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYII 270
+ R L+ G EV DIEDLV G+ + C YYA+R+ DAQ++ PY I+
Sbjct: 296 YNQ----RAIEGLKNGILFEVPDIEDLVKAGKREQACPYYASRAAIPDAQVLMVPYQLIL 351
Query: 271 NPVIRGAMEVDIKGAILILDEAHNIED 297
+ R + ++ AILI+DEAHN+ D
Sbjct: 352 HRRTRQQSGIRLQDAILIIDEAHNLLD 378
Score = 95.5 bits (236), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 134/324 (41%), Gaps = 59/324 (18%)
Query: 457 TLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEA------PHVI 510
++ LNP F+D+ + S++L GT+ P + ++ F C E PHV+
Sbjct: 601 SMKYLLLNPGGKFEDIVQSCRSVVLAGGTMQPTEELTEQV---FRNCRERVTIKSYPHVV 657
Query: 511 DVDLQVLTSVISTGPD------NYP---------------LNASYKTADG-------YKL 542
D VL + GP NY LN S G Y
Sbjct: 658 PKD-AVLPIALGRGPTGKDFLFNYNNKHNVEMLDELQSTLLNISQVVPHGVVVFFSSYDF 716
Query: 543 MEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRV 602
++ + E+G +RL +K +F EPK Q E L Y + + +
Sbjct: 717 LDLFTRKLEESGNRARLEERKKVFREPKTSGQ--VEKTLSEYGRAARSATGAIL------ 768
Query: 603 KREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYND---TYR 659
+ + + + + L C +VVG+P+PN ++ + +Y D
Sbjct: 769 -------FSVVGGKLSEGLNFSDQLGRC--VVVVGLPYPNRTSPELCERMRYLDRSLAGA 819
Query: 660 SSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERF-QEERNRAHISKWLRK 718
+S +GNE+Y N +A+NQ IGR +RH DY A+ILLD R+ ER R + W+ +
Sbjct: 820 TSGASSAGNEYYENLCMKAVNQCIGRAVRHIRDYAAVILLDTRYCTGERIRRKLPVWISE 879
Query: 719 SIKQYDSFDASLEGLKSFFRDVKG 742
++ + + + L FFRD K
Sbjct: 880 RMECAERYGQAHGKLVKFFRDHKA 903
Score = 49.7 bits (117), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 30/57 (52%), Gaps = 5/57 (8%)
Query: 22 GIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
G FP+ PY QL FM TL G + ESPTGTGKSLSL C TL W
Sbjct: 16 GSDFAFPFLPYDIQLDFM----KTLYTVIHSGGI-GIFESPTGTGKSLSLTCGTLTW 67
>gi|356499550|ref|XP_003518602.1| PREDICTED: DNA repair helicase UVH6-like [Glycine max]
Length = 758
Score = 99.4 bits (246), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 160/768 (20%), Positives = 295/768 (38%), Gaps = 181/768 (23%)
Query: 122 PSTNGQTAQVA--MNNKNVKKKMTPT-IFYASRTHSQISQVISEYKKT----------AY 168
P+ G+T + + + + K +P + Y +RT ++ + ++E + A
Sbjct: 43 PTGTGKTIALLSLITSYVLSKPHSPLKLLYCTRTVHEMEKTLAELRLLHHYQLRHLGPAA 102
Query: 169 RVPMAVLASRKHYCTNKYVRDKEN---IDEECKLL-------LGDRNLGCP--QFKNVHK 216
++ L+SRK+ C N V EN +D C+ L + N P +F ++
Sbjct: 103 KILALGLSSRKNLCVNPRVLAAENRDSVDAGCRKLTASWVRAVAAENPSVPSCEFFEQYE 162
Query: 217 VRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRG 276
G ++ G V+ ++DL G+ C YY AR M A +V Y Y+++P + G
Sbjct: 163 RAGSSAVLPPG---VYTLQDLRAYGKEKGWCPYYLARHMVQFANVVVYSYQYLLDPKVAG 219
Query: 277 AMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDV-------LLKLQMELEQVCSVNP- 327
+ ++ K ++++ DEAHNI+++ +A SV + L +++ E+++ + +
Sbjct: 220 IISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTIEGARRNLSRMRQEIDKFKATDAG 279
Query: 328 ---MIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRELQEANISR-QCFP 383
Y L+E L G + A LA D L+E NI R + F
Sbjct: 280 RLRAEYNRLVEGLA-LRGDLPATDAWLANPALP--------DDILKEAVPGNIRRAEHFI 330
Query: 384 ILLECATKAIKEATDTES---ELPHLSGMSVITLEGL----------------------- 417
+L + ++ DTE+ E P +S++ G+
Sbjct: 331 HVLRRLVQYLEGRLDTENVEKESPVSFVVSILNHAGIDQKSLKFCYDRLHSLMMTLEITD 390
Query: 418 ------FSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKD 471
++ F + G++ + + ++ + +R P L L C + ++ K
Sbjct: 391 TDEFLHIQTICDFATLVGTYARGFSIIIEPFDERMPHIPDP----VLQLCCHDASLAIKP 446
Query: 472 VAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQ-VLTSVISTGPDNYPL 530
V E S+++TSGTLSP++ + L F + + + + V++ G D P+
Sbjct: 447 VFERFQSVVITSGTLSPIDLYPRLL--NFNPVVSRSFTMSLTRDCICPMVLTRGSDQLPV 504
Query: 531 NASYK---------------------TADG-------YKLMEKLCNRWRETGQWSRLNAK 562
+ + DG Y M+ + N W E G +
Sbjct: 505 STKFDMRSDLGVVRNYGRLLLEMASVVPDGIVCFFVSYSYMDGIVNTWNENGILKEIMQH 564
Query: 563 KPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKK 622
K +F+E +Q+ E L ++ + C +
Sbjct: 565 KLVFIE----TQDVVETTLA--LDNYRKACDCG--------------------------R 592
Query: 623 GASFLAVCRGK---------------IVVGIPFP-NINDIQVSLKKKYNDTYRSSKNLLS 666
GA F +V RGK I+ G+PF ++ I ++ + DT++ +
Sbjct: 593 GAIFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQ-----IK 647
Query: 667 GNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYD-- 724
++ A R Q +GR IR + DYG +I D+R+ R+ + W+ +
Sbjct: 648 EGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPSWILSHLHDAHLN 707
Query: 725 -SFDASLEGLKSFFR------DVKGWVGKKMFNGLENSDNDVDHVSSM 765
S D +L + F R D G G+K L D + VS M
Sbjct: 708 LSTDMALHVARDFLRKMAQPYDKTGGTGRKTL--LSQEDLEKMAVSGM 753
>gi|390597969|gb|EIN07368.1| DNA repair helicase [Punctularia strigosozonata HHB-11173 SS5]
Length = 796
Score = 99.0 bits (245), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 156/727 (21%), Positives = 291/727 (40%), Gaps = 146/727 (20%)
Query: 122 PSTNGQTAQVAMNNKNVKKKMTPT---IFYASRTHSQISQVISEYKKTA-YRVPMAV--- 174
PS G+T + ++ ++ PT + Y SRT +I + +SE K+ YR+ A
Sbjct: 43 PSGTGKTVSL-LSLIVSYQQFYPTKRKLIYCSRTVPEIEKALSELKRLMEYRIECAETEE 101
Query: 175 ------------LASRKHYCTNKYVRDKEN---IDEECKLLL-------GDRNLGCPQFK 212
L SRK+ C + V ++ +D C+ L G G +
Sbjct: 102 EKEKERNFSGLGLTSRKNLCIHPEVSKEKKGKVVDARCRDLTNSAVCERGRAEPGSVELC 161
Query: 213 NVHKV---RGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYI 269
H+ R +L G + + D++ G+ C Y+ R M ++ + Y+
Sbjct: 162 TFHEKLSEREPGNLIPPG---IWTLADVLQYGRDQGTCPYFTVRRMMPFVDVIIYSFHYL 218
Query: 270 INPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVL-------LKLQMELEQ 321
++P + + ++ K AI++ DEAHNI+++ ++ S+D+ +L ++L ++E+
Sbjct: 219 LDPKVAEQVSKELSKDAIVVFDEAHNIDNVCIESLSIDLTRPMLDSASRSVIRLGEKIEE 278
Query: 322 VCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFF--SCWTGDKALRELQEANISR 379
+ + ++ + +E + T ++ + F S D L+E NI +
Sbjct: 279 IKKTDAS------KLQDEYAKLVEGLQETTDEQSDEDAFVTSPVLPDDLLKEAIPGNIRK 332
Query: 380 --------QCFPILLECATKAIKEATDTE-SELPHLSGMSVI-----------------T 413
+ F L+ + + +T S L HL ++ I T
Sbjct: 333 AEHFVAFLKRFVEYLKTRMRVLHVVAETPLSFLQHLKDITYIERRPLRFCAERLQSLVRT 392
Query: 414 LE----GLFSSL---TYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPA 466
LE +SSL F + ++ + L L+ + ++ P + L CL+PA
Sbjct: 393 LELTRIDEYSSLQKVASFATLVSTYEKGFLLILEPFETDNATVPNPMF----HLTCLDPA 448
Query: 467 VVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQV-LTSVISTGP 525
+ K V E S+I+TSGT+SP++ + L QF ++ + + + L VI+ G
Sbjct: 449 IAIKPVFERFSSVIITSGTISPLDMYPKML--QFTPVVQETYPMTLTRNAFLPLVITRGS 506
Query: 526 DNYPLNASYK---------------------TADG-------YKLMEKLCNRWRETGQWS 557
D +++ ++ DG Y ME + W + G +
Sbjct: 507 DQVAVSSRFEVRNDPAVVRNFGSILVEYSKIVPDGIVAFFPSYLYMESIVAAWNDMGILN 566
Query: 558 RLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQE 617
+ K +FVE ++ I L++Y + G ++ R K D +
Sbjct: 567 EVWKNKLIFVETPDANET--SIALENYRRACDNGRGAVLLSVARGKVSEGIDFD------ 618
Query: 618 NANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKY-NDTYRSSKNLLSGNEWYCNQAF 676
+ G R I+ G+P+ + + +Y D YR + +E+ A
Sbjct: 619 --HNYG-------RAVIMFGVPYQYTESRILKARLEYLRDAYR-----IRESEFLGFDAM 664
Query: 677 RALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYD---SFDASLEGL 733
R Q +GR +R + D+G +I D+RF RA + KW+ + I + S D +L
Sbjct: 665 RNAAQCVGRVLRGKTDWGLMIFADKRFARADKRAKLPKWINQYITETASNLSTDMALTLS 724
Query: 734 KSFFRDV 740
K F R +
Sbjct: 725 KLFMRTI 731
Score = 57.8 bits (138), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 48/83 (57%), Gaps = 6/83 (7%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+H+ + + FPY + Y Q +MC + TLD GHC +LE P+GTGK++SLL +
Sbjct: 3 FHIDNLPIIFPYDRIYPEQYAYMCDLKRTLDAT---GHC--VLEMPSGTGKTVSLLSLIV 57
Query: 77 AWQQNCKLKNQLANISHSKPDTE 99
++QQ K +L S + P+ E
Sbjct: 58 SYQQFYPTKRKLIYCSRTVPEIE 80
>gi|12835975|dbj|BAB23443.1| unnamed protein product [Mus musculus]
Length = 593
Score = 98.6 bits (244), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 139/590 (23%), Positives = 235/590 (39%), Gaps = 119/590 (20%)
Query: 231 VHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDI-KGAILIL 289
+++++DL +GQ C Y+ AR A +V Y Y+++P I + ++ + A+++
Sbjct: 7 IYNLDDLKALGQRQGWCPYFLARYSILHANVVVYSYHYLLDPKIADLVSKELARKAVVVF 66
Query: 290 DEAHNIEDIARDAGSVDIDEDVLLKLQMELEQ----VCSVNPMIYQPLIEMTQDLVGWIE 345
DEAHNI+++ D+ SV++ L + Q L+ V + Q L + + LV +
Sbjct: 67 DEAHNIDNVCIDSMSVNLTRRTLDRCQSNLDTLQKTVLRIKETDEQRLRDECRRLVEGL- 125
Query: 346 RRKATLAKREFQHFFSCWTGDKALRELQEANI-SRQCFPILLECATKAIK-----EATDT 399
R+A++A+ H + D+ L+E +I + + F L + +K +
Sbjct: 126 -REASVARETDAHLANPVLPDEVLQEAVPGSIRTAEHFLGFLRRLLEYVKWRLRVQHVVQ 184
Query: 400 ESELPHLSGMS--------------------VITLE----GLFSSLTYFFSRNGSHVSDY 435
ES LSG++ + TLE FS LT + + VS Y
Sbjct: 185 ESPPAFLSGLAQRVCIQRKPLRFCAERLRSLLHTLEIADLADFSPLT-LLANFATLVSTY 243
Query: 436 QLALQKYIK-RDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSS 494
I+ D + P L C++ ++ K V E S+I+TSGTLSP++ +
Sbjct: 244 AKGFTIIIEPFDDRTPTIA-NPVLHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIYPK 302
Query: 495 ELG---VQFGT--------CLEAPHVIDV--DLQVLTSVISTGPD--------NYPLNAS 533
L V T CL P +I D ++S T D N L S
Sbjct: 303 ILDFHPVTMATFTMTLARVCL-CPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLLEMS 361
Query: 534 YKTADG-------YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYN 586
DG Y+ ME W E G + K LF+E + G++ + L+ Y
Sbjct: 362 AVVPDGIVAFFTSYQYMESTVASWYEQGILENIQRNKLLFIETQDGAETS--VALEKYQE 419
Query: 587 SISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPF------ 640
+ G +GA L+V RGK+ GI F
Sbjct: 420 ACENG------------------------------RGAILLSVARGKVSEGIDFVHHYGR 449
Query: 641 -------PNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDY 693
P + LK + Y + + N++ A R Q +GR IR + DY
Sbjct: 450 AVIMFGVPYVYTQSRILKARLE--YLRDQFQIRENDFLTFDAMRHAAQCVGRAIRGKTDY 507
Query: 694 GAIILLDERFQEERNRAHISKWLRKSIKQYD---SFDASLEGLKSFFRDV 740
G ++ D+RF R + +W+++ + + + D ++ K F R +
Sbjct: 508 GLMVFADKRFARADKRGKLPRWIQEHLTDSNLNLTVDEGVQVAKYFLRQM 557
>gi|403215508|emb|CCK70007.1| hypothetical protein KNAG_0D02580 [Kazachstania naganishii CBS
8797]
Length = 832
Score = 98.6 bits (244), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 92/185 (49%), Gaps = 18/185 (9%)
Query: 146 IFYASRTHSQISQVISEYKKTAY-----------RVPMAVLASRKHYCTNKYVRD---KE 191
IF+ASRTHSQ++Q S+ + + RV LAS+K C N V E
Sbjct: 210 IFFASRTHSQLNQFASQLQLPKFPSSFPDSVPNERVKFLPLASKKQLCINPEVTKWGTLE 269
Query: 192 NIDEECKLLLGDRNLGCPQFKNV---HKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCS 248
I++ C + GCP ++N H + + VHDIE+LV GQ +R C
Sbjct: 270 AINDACYEVRHSPK-GCPYYQNTTEWHYSKDTTFFKDKLFESVHDIENLVETGQHLRVCP 328
Query: 249 YYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDID 308
YYA+R +++ PY Y+++ R M +D+K +I+I+DEAHN+ D S +
Sbjct: 329 YYASRDTLPGMEVITLPYQYLLSESTRDIMGIDLKDSIVIIDEAHNLVDTVNSIHSAKVT 388
Query: 309 EDVLL 313
D L+
Sbjct: 389 LDDLI 393
Score = 88.6 bits (218), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 96/210 (45%), Gaps = 34/210 (16%)
Query: 540 YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSIS-QGSKCAVVR 598
Y+ ++ + ++W+E G + +N + +F E K G L Y ++ Q K +
Sbjct: 644 YQFLQNIIDQWKENGIFDEMNRTRKIFYESKNGKDP-----LNDYTTVVTNQDPKVGAIL 698
Query: 599 KKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNIND---------IQVS 649
V G I Q+N +CR ++ G+PFPN+ +Q
Sbjct: 699 FAVV---GGRLSEGINFQDN----------LCRAVVMTGLPFPNLASGELQIKKLHLQEK 745
Query: 650 LKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNR 709
+KK+ DT +++K+ + N +A+NQ++GR IRH DY I LLD R+ E R
Sbjct: 746 VKKRGGDTKQATKDFIE------NICMKAVNQSVGRAIRHMNDYANIYLLDNRYSNESIR 799
Query: 710 AHISKWLRKSIKQYDSFDASLEGLKSFFRD 739
+S W+R+ I+ S D + FF +
Sbjct: 800 GKLSLWVRRRIQPQTSLDGVITETTRFFTE 829
Score = 49.3 bits (116), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 39/63 (61%), Gaps = 5/63 (7%)
Query: 28 PYQPYGSQLVFMCRVISTLD-RAQRDGHCH----ALLESPTGTGKSLSLLCSTLAWQQNC 82
P++PY Q+ M + L A + + +LESPTGTGK+LSL+C++L+W ++
Sbjct: 8 PFEPYDIQVELMQCIYDVLSSTASTNANVQRKKIGILESPTGTGKTLSLICASLSWLRDN 67
Query: 83 KLK 85
KLK
Sbjct: 68 KLK 70
>gi|402216420|gb|EJT96518.1| hypothetical protein DACRYDRAFT_25669, partial [Dacryopinax sp.
DJM-731 SS1]
Length = 532
Score = 98.6 bits (244), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 94/167 (56%), Gaps = 5/167 (2%)
Query: 146 IFYASRTHSQISQVISEYKKTAY--RVPMAVLASRKHYCTNKYVRDKE--NIDEECKLLL 201
I+Y SRTHSQ+SQ++SE +KT + L SR++ C N +R+K ++DE C+ L+
Sbjct: 87 IYYTSRTHSQLSQLVSELRKTPLYEKTRFVALGSRRNLCINHELRNKAGGDLDEACRDLV 146
Query: 202 GDR-NLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQ 260
++ GCP + ++ + DIEDLV +G+ ++ C YY +R ++
Sbjct: 147 NNKQGKGCPFLPSHDEMSKMLDFRDHVLAAPKDIEDLVTLGEELKICPYYGSRQAIKQSE 206
Query: 261 LVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDI 307
+V PY+ ++ R A+++++ ++++DEAHN+ D SV +
Sbjct: 207 VVTLPYNLLLQKSAREALDINLHDQVVVIDEAHNLIDTVLSIHSVTL 253
>gi|156836024|ref|XP_001642254.1| hypothetical protein Kpol_187p1 [Vanderwaltozyma polyspora DSM
70294]
gi|206557738|sp|A7TTL0.1|CHL1_VANPO RecName: Full=ATP-dependent RNA helicase CHL1; AltName:
Full=Chromosome loss protein 1
gi|156112733|gb|EDO14396.1| hypothetical protein Kpol_187p1 [Vanderwaltozyma polyspora DSM
70294]
Length = 829
Score = 98.6 bits (244), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 90/169 (53%), Gaps = 22/169 (13%)
Query: 146 IFYASRTHSQISQVISEYK----KTAY--------RVPMAVLASRKHYCTNKYVRDK--- 190
IF+ASRTHSQ+ Q S+ K K+++ R+ L SRK C NK + K
Sbjct: 212 IFFASRTHSQLKQFASQLKLPKFKSSFDEKFVSNERLKYLPLGSRKQLCINKSITSKWKS 271
Query: 191 -ENIDEECKLLLGDRNLGCPQF-KNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCS 248
E I++ CK LL GCP KN + G VHDIED++ +G+ + C
Sbjct: 272 TEAINDACKELLQSEK-GCPYHNKNTSNTLFRDHVFTG----VHDIEDILALGESLNVCP 326
Query: 249 YYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIED 297
YYA R A+++ PY Y+++ R ++ +D+ +I+I+DEAHN+ D
Sbjct: 327 YYATRDSITSAEIITLPYQYLLSESTRDSLNIDLSNSIVIVDEAHNLID 375
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 126/308 (40%), Gaps = 70/308 (22%)
Query: 457 TLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSEL--------GVQFGTCLEAP- 507
++ L P+ FK + + + +IL GT+ P++ F L V F P
Sbjct: 526 SIKYMLLEPSQSFKSILDEARCVILAGGTMEPISDFFDNLFPDIIKDKSVTFACDHVIPD 585
Query: 508 -----HVID----------------VDLQVLTSVISTGPDNYPLNASYKTADGYKLMEKL 546
++I+ V+ + I + P Y ++ +
Sbjct: 586 DNLNTYIIEEPKFEFTFDKRQNPELVNKHLFQFFIKLSVNVPPTGGIVAFFPSYSYLQFV 645
Query: 547 CNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKC---AVVRKKRVK 603
+ WR G + +LN + +F E K GS L Y I + AVV K
Sbjct: 646 IDNWRSNGLFDKLNKIREIFYESKNGSDP-----LDEYIKVIEARNPAILFAVVGGKL-- 698
Query: 604 REGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYNDTYRSSKN 663
EG I Q++ +CR ++ G+P+PN+ ++ +KK + +T K
Sbjct: 699 SEG------INFQDD----------LCRAVVMTGLPYPNVMSGELLIKKNHIET----KI 738
Query: 664 LLSG----------NEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHIS 713
L +G +++ +A+NQ++GR IRH DY I LLD+R+ + + +S
Sbjct: 739 LKNGGSKADVSCATKDFFDTICMKAVNQSVGRAIRHIDDYSNIYLLDQRYSNSKIKDKLS 798
Query: 714 KWLRKSIK 721
+W+RK I+
Sbjct: 799 QWVRKRIQ 806
Score = 57.0 bits (136), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 37/57 (64%), Gaps = 4/57 (7%)
Query: 28 PYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCKL 84
PYQPY QL M + L ++ A+LESPTGTGK+LSLLCS++ W ++ KL
Sbjct: 8 PYQPYEIQLQLMQCIYGALSSGKK----IAILESPTGTGKTLSLLCSSITWLRDNKL 60
>gi|403375820|gb|EJY87881.1| hypothetical protein OXYTRI_22467 [Oxytricha trifallax]
Length = 645
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 139/311 (44%), Gaps = 82/311 (26%)
Query: 16 NAYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCST 75
+ + GI+V+FP PY Q+ +M + + + + A L+ PTGTGK+LSLL ST
Sbjct: 56 DVIQIEGIKVKFPNVPYNVQVDYMTQAVKAIK-----NNKFAALDMPTGTGKTLSLLSST 110
Query: 76 LAWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNN 135
LA+ +T DP+
Sbjct: 111 LAF-----------------IETMKKLDPI----------------------------KY 125
Query: 136 KNVKKKMTPTIFYASRTHSQISQVISEYKKTAYR-VPMAVLASRKHYCTNKYVRDK---E 191
+N+K + Y SRTHSQ+SQV E +K+ Y+ A +ASR YC + + +
Sbjct: 126 RNLK------LIYTSRTHSQLSQVKKEMRKSPYQYFKSATVASRDKYCLQEQLVQEFKGN 179
Query: 192 NIDEECK--------------LLLGDRNLGCPQFKN-----VHKVRGHPSLQKGGCHEVH 232
++ +EC+ +L ++ + PQ + V+++ H + + +
Sbjct: 180 DLRKECQKLRSKNQIKVIYDEILQKEQKIVVPQCQYYKMVPVNRISVHKVI--AAINHI- 236
Query: 233 DIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEA 292
DIEDL G+ + C YY++ A + ++F PY+YI++ + +++D+ I+++DE
Sbjct: 237 DIEDLCIAGKEQKICPYYSSFQKAKSSDILFLPYNYILDIEMIVKLDLDLTQCIIVIDEG 296
Query: 293 HNIEDIARDAG 303
HN +DA
Sbjct: 297 HNFTQSCKDAS 307
Score = 47.4 bits (111), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Query: 458 LSLWCLNPAVVFKDVAELS-LSIILTSGTLSPMNSFSSELGVQFGTCL 504
+ L+C N A +FKD+ L+ S+ILTSG+L +++ +SELG F L
Sbjct: 459 MHLYCFNAAFIFKDIQNLNPFSLILTSGSLGEISTIASELGTNFDFTL 506
>gi|401882732|gb|EJT46976.1| general RNA polymerase II transcription factor [Trichosporon asahii
var. asahii CBS 2479]
Length = 794
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 148/691 (21%), Positives = 264/691 (38%), Gaps = 158/691 (22%)
Query: 146 IFYASRTHSQISQVISEYKK-TAYRVPMAV---------LASRKHYCTNKYVRDKENIDE 195
+ Y SRT +I + ++E K+ YR M L SRK+ C N + + +D
Sbjct: 91 LIYCSRTVPEIEKALAELKRLMEYREDMGAKDTGFRGLGLTSRKNLCLNPEEKKGKVVDS 150
Query: 196 ECKLLLGDRNLGCPQFKNVHKVRGHP-SLQKGGCHE--------------VHDIEDLVNV 240
C+ + + C K R P S+Q HE V ++D+
Sbjct: 151 RCRDMTS--SFAC------EKGRADPGSVQLCSWHEELNNYEPGHLIPEGVWTLDDVKKY 202
Query: 241 GQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNI--ED 297
GQ C Y+ R M ++ + Y+++P + + ++ K AI++ DEAHNI
Sbjct: 203 GQEKGVCPYFTIRRMMPYVDVIIYSFHYLLDPKVAEQVSAELSKEAIVVFDEAHNIAARS 262
Query: 298 IARDAGSVD-IDEDVLLKLQMELEQVCS---------------VNPMIYQPLIE------ 335
+A+ +D I + KL E +++ NP++ + +I+
Sbjct: 263 VAKIGDKIDEIKKSDAEKLNAEYQKLVDGLAAANDRREEDDMLSNPVLSEDMIQEAIPGN 322
Query: 336 --MTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRELQEAN-ISRQCFPILLECATKA 392
+ + +++R L R T + L+E I ++ E T
Sbjct: 323 IRKAEHFIAFLKRFIEYLKTRMRVLHVVAETPQSFMAHLKEITFIEKRPLQFCAERLTSL 382
Query: 393 IKEATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGG 452
I+ EL +L + F +L + + + L L+ Y + P
Sbjct: 383 IRTL-----ELTNLDEHFALQKIASFGTLVATYEKG------FLLILEPYETEHATVPNP 431
Query: 453 NWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDV 512
+ T CL+P++ V E S+I+TSGT+SP++ + L QF ++ + + +
Sbjct: 432 IFHFT----CLDPSLAMAPVFERFSSVIITSGTISPLDMYPKML--QFQPVIQESYPMTL 485
Query: 513 DLQV-LTSVISTGPDNYPLNASYK---------------------TADG-------YKLM 543
L VI+ G D P+++ ++ DG Y M
Sbjct: 486 TRNAFLPMVITRGSDQVPISSRFEVRNDPAVVRNFGSILIDMAKTVPDGVVAFFPSYLYM 545
Query: 544 EKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVK 603
E + + W + G S + K LFVE + I LK+Y
Sbjct: 546 ESIVSAWYDMGILSEVWKHKLLFVETPDAMET--SIALKNY------------------- 584
Query: 604 REGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNIND---IQVSLKKKYNDT--- 657
RE N N +GA L+V RGK+ GI F + I + +Y ++
Sbjct: 585 REACN-----------NGRGAVLLSVARGKVSEGIDFDHNYGRAVIMFGIPYQYTESRIL 633
Query: 658 -----YRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHI 712
+ + + N++ A R Q +GR +R + D+G ++ F ++ RA +
Sbjct: 634 KARLEFLRDNHRIRENDYLTFDAMRHAAQCVGRVLRGKTDWGLMV-----FADKDKRAKL 688
Query: 713 SKWLRKSIKQYD---SFDASLEGLKSFFRDV 740
+W+ + I S D ++ K F R++
Sbjct: 689 PRWINQYITDAHSNLSTDMAVVLAKKFIRNI 719
>gi|393236508|gb|EJD44056.1| DNA repair helicase [Auricularia delicata TFB-10046 SS5]
Length = 810
Score = 98.2 bits (243), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 149/712 (20%), Positives = 279/712 (39%), Gaps = 160/712 (22%)
Query: 122 PSTNGQTAQVAMNNKNVKKKMTPT---IFYASRTHSQISQVISEYKK-TAYRVPMAV--- 174
PS G+T + ++ ++ PT + Y SRT +I + ++E K+ AYR+ A
Sbjct: 43 PSGTGKTVSL-LSLIVSYQQFFPTKRKLIYCSRTVPEIEKALAELKRLMAYRIECAETEE 101
Query: 175 ------------LASRKHYCTNKYVRDKEN---IDEECKLLLGDRNLGCPQFKNVHKVRG 219
L SRK+ C + V ++ +D C R+L C N K R
Sbjct: 102 ERERERAFTGLGLTSRKNLCLHPEVAKEKKGWVVDARC------RDLTCT--ANCEKARA 153
Query: 220 HPS-------------LQKGGC--HEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFC 264
+P ++ G + + D+ GQ C Y+ R M ++
Sbjct: 154 NPGSVPVCTWHDKLGEMEPGNLIPQGIWTLADVQAYGQEKGVCPYFTIRRMMPFVDVIIY 213
Query: 265 PYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVL-------LKLQ 316
+ Y+++P + + ++ K AI++ DEAHNI+++ ++ S+D+ +L +L
Sbjct: 214 SFHYLLDPKVAEQVSKELSKDAIVVFDEAHNIDNVCIESLSIDLTRPMLDSAARSVTRLG 273
Query: 317 MELEQVCSVNPMI----YQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALREL 372
++E++ + Y L+E Q+ A A+ E + D L E
Sbjct: 274 DQIEEIKKTDASKLQDEYAKLVEGLQE---------AADARDEDAFIANPILPDDLLTEA 324
Query: 373 QEANISR--------QCFPILLECATKAIKEATDTE-SELPHLSGMSVIT---------- 413
NI + + F L+ + + +T S L HL ++ I
Sbjct: 325 VPGNIRKAEHFVAFLKRFVEYLKTRMRVLHVVAETPLSFLQHLKDITFIERRPLRFCAER 384
Query: 414 LEGLFSSLTY--------------FFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLS 459
L+ L +L F + ++ + L L+ + ++ P + T
Sbjct: 385 LQSLVRTLELTRLDEMRSLQKVASFATLVATYEKGFLLILEPFETDNATVPNPVFHFT-- 442
Query: 460 LWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEA--PHVIDVDLQVL 517
CL+P++ K + E S+++TSGT+SP++ + L QF ++ P + D L
Sbjct: 443 --CLDPSLAIKPIFERFSSVVITSGTISPLDMYPKML--QFTPVVQETYPMTLTRD-AFL 497
Query: 518 TSVISTGPDNYPLNASYK---------------------TADG-------YKLMEKLCNR 549
VI+ G D +++ ++ DG Y ME +
Sbjct: 498 PLVITRGSDQVAVSSRFEVRNDPAVVRNFGSILIEYSKIVPDGIVAFFPSYLYMESIVAA 557
Query: 550 WRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNND 609
W + G + + K +FVE ++ I L++Y + + G ++ R K D
Sbjct: 558 WNDMGILNEVWKNKLIFVETPDANET--SIALENYRRACNNGRGAVLLSVARGKVSEGID 615
Query: 610 LNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKY-NDTYRSSKNLLSGN 668
+ + G R I+ G+P+ + + +Y D YR + +
Sbjct: 616 FD--------HHYG-------RAVIMFGVPYQYTESRILKARLEYLRDAYR-----IRES 655
Query: 669 EWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSI 720
E+ A R Q +GR +R + D+G ++ D+RF RA + +W+ + I
Sbjct: 656 EFLGFDAMRNAAQCVGRVLRGKTDWGLMVFADKRFARADKRAKLPRWINQYI 707
Score = 53.5 bits (127), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 47/83 (56%), Gaps = 6/83 (7%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+ + + + FPY + Y Q +MC + TLD GHC +LE P+GTGK++SLL +
Sbjct: 3 FFIDNLPIIFPYDRIYPEQYSYMCDLKRTLDAT---GHC--VLEMPSGTGKTVSLLSLIV 57
Query: 77 AWQQNCKLKNQLANISHSKPDTE 99
++QQ K +L S + P+ E
Sbjct: 58 SYQQFFPTKRKLIYCSRTVPEIE 80
>gi|336271859|ref|XP_003350687.1| hypothetical protein SMAC_02358 [Sordaria macrospora k-hell]
Length = 796
Score = 98.2 bits (243), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 142/660 (21%), Positives = 266/660 (40%), Gaps = 115/660 (17%)
Query: 146 IFYASRTHSQISQVISEYKK-TAYRVPMAV---------LASRKHYCTNKYVRDKEN--- 192
+ Y SRT S+I + + E + +R L SRK+ C + V+ +++
Sbjct: 59 LIYCSRTMSEIEKALVELRALMKFRAERLGREEEFRGLGLTSRKNLCLHPSVKREKSGTI 118
Query: 193 IDEECK-LLLGDRNLGCPQFKNVHKVRGHPSL---QKGGC--HEVHDIEDLVNVGQVVRG 246
+D C+ L G + +NV H +L ++G + + ++ L+ G+ +
Sbjct: 119 VDARCRSLTAGFVKEKREKGENVETCIYHDNLDLLEQGNLIPNGIWTLDGLLRYGEEKKQ 178
Query: 247 CSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSV 305
C Y+ AR M ++ Y Y+++P I + D+ K I++ DEAHNI+++ ++ S
Sbjct: 179 CPYFTARRMMQYCNVIIYSYHYLLDPKIAERVSKDLSKDCIVVFDEAHNIDNVCIESLST 238
Query: 306 DIDEDVLLKLQMELEQV-CSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWT 364
DI +D L++ + + + M ++ + +E K R+ F + T
Sbjct: 239 DITQDSLMRATRGAQNLEAKIAEMKDSDQEKLQSEYEKLVEGLKGLDEGRQEDAFMANPT 298
Query: 365 -GDKALRELQEANISR--------QCFPILLECATKAIKEATDTE-SELPHLSGMSVI-- 412
D L+E NI R + F L+ K + ++T S L HL + I
Sbjct: 299 LPDDLLKEAVPGNIRRAEHFVAFLRRFIEYLKTRMKVRQVISETPPSFLAHLKEYTFIEK 358
Query: 413 ---------------TLEGL-------FSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNP 450
TLE + F + ++ + L L+ Y +K P
Sbjct: 359 KPLRFCAERLTSLVRTLELTNIEDYRPLQEVATFATLVATYEKGFLLILEPYESDTAKTP 418
Query: 451 GGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVI 510
L CL+ A+ K V + S+I+TSGT+SP+ + L F T ++ + +
Sbjct: 419 NP----VLHFTCLDAAIAIKPVFDRFSSVIITSGTISPLEMYPKMLN--FETVVQESYAM 472
Query: 511 DVDLQ-VLTSVISTGPDNYPLNASYK---------------------TADG-------YK 541
+ + L +++ G D ++ S++ T DG Y
Sbjct: 473 TLARRSFLPMIVTRGSDQASISTSFQVRNEPSVVRNYGNLLTEFARMTPDGMVVFFPSYL 532
Query: 542 LMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKR 601
ME + + W+ G + K + VE + + L+ Y + G ++ R
Sbjct: 533 YMESIISMWQGMGILDEVWKHKLILVETPDAQETS--LALETYRTACCNGRGAVLLCVAR 590
Query: 602 VKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKY-NDTYRS 660
K D + ++ G + L +G+PF + + ++ +TYR
Sbjct: 591 GKVSEGIDFD--------HQYGRTVLC-------IGVPFQYTESRILKARLEFLRETYR- 634
Query: 661 SKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSI 720
+ N++ A R Q +GR +R + DYG ++L D RF + RA + KW+ +++
Sbjct: 635 ----IRENDFLSFDAMRHAAQCLGRVLRGKDDYGVMVLADRRFM--KKRAQLPKWINQAL 688
>gi|241998210|ref|XP_002433748.1| conserved hypothetical protein [Ixodes scapularis]
gi|215495507|gb|EEC05148.1| conserved hypothetical protein [Ixodes scapularis]
Length = 280
Score = 98.2 bits (243), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 126/286 (44%), Gaps = 45/286 (15%)
Query: 462 CLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVI 521
CL+ + VA+ + +I+L SGTLSP S+ +ELG++F + HV+ + ++ +
Sbjct: 9 CLDSRYAMESVAKNTRTIVLASGTLSPTTSYEAELGLKFKHKIIGNHVVPPENVLIKRIS 68
Query: 522 STGPDNYPLNASYKTADGYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVL 581
+ L +Y + +++ + Q +L+ V GG +
Sbjct: 69 HSLNGKRSLRLTYNAYNDIRIVSDIGELLISVCQTMKLSE-----VGACGGG-------V 116
Query: 582 KHYYNSISQGSKCAVVRK-------KRVKREGNNDL-------NTIESQENANKKGASFL 627
++ S SKC + K K + RE N + NTI + G L
Sbjct: 117 LCFFPSYQAMSKCIEIWKTAMDDVWKSLMRETNGCIYVEDPLRNTINGYIESIACGEVSL 176
Query: 628 --AVCRGK---------------IVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSGNEW 670
AV RG+ I +GIPFP+ V K K+ND LL G W
Sbjct: 177 MCAVHRGRISEGIDFSDNLARAVISIGIPFPSTQQEDVHFKMKFNDA--RQPQLLDGRHW 234
Query: 671 YCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWL 716
Y QA RA+NQA+GRCIRH D+G I+L+D RF + +S W+
Sbjct: 235 YQIQAMRAVNQAVGRCIRHSKDWGLILLVDHRFFQNEIWIGMSDWI 280
>gi|440471332|gb|ELQ40355.1| DEAD_2 domain-containing protein [Magnaporthe oryzae Y34]
Length = 1458
Score = 97.8 bits (242), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 169/752 (22%), Positives = 278/752 (36%), Gaps = 228/752 (30%)
Query: 146 IFYASRTHSQISQVISEYKK-------------------TAYR--VPMAVLASRKHYCTN 184
IFY SRTHSQ++Q ISE ++ T R V L+SR+ C N
Sbjct: 779 IFYTSRTHSQLTQFISELRRPNFPSSFPGADEPSLSKTETGTRECVKHVPLSSRQKLCIN 838
Query: 185 KYVR---DKENIDEECKLLLGDRNLG----CPQFKNVHKVRGHPSLQKGGCHEVHDIEDL 237
V I++ C L + CP + + + + DIED
Sbjct: 839 PAVARLGSVAAINDRCTELQKSKAKSEGKRCPYVPSQDNLSETHQFRDASLATIPDIEDA 898
Query: 238 VNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIED 297
+G+ ++G+++++DEAHNI D
Sbjct: 899 HKLGK--------------------------------------SLQGSVVVVDEAHNIMD 920
Query: 298 IARDAGSVDIDEDVLLKLQMEL--------EQVCSVNPMIYQPLIEMTQDLVGWIERRKA 349
S +I + L + + L +++ + N ++ + + Q L W+ER
Sbjct: 921 AIAGVHSAEIRLEDLRRGREMLSIYAKRFGKKLKAENRIMVGQVARVIQGLSEWLER--- 977
Query: 350 TLAKREFQHFF---SCWTGDKALREL---------QEANISRQCFPIL-----LECATKA 392
++ +H K + ++ QE+ ++ + LE A+K
Sbjct: 978 -ALEQSVEHGIIDPRVLLKTKGMDQIDMFALISYIQESKLAYKIESYAAHVDELEEASKG 1036
Query: 393 IKEATDTESELPHLSGMSVITLEGLFSSLTYFFSR----NGSHVSDYQLALQKYIKRDSK 448
K+ T L +LS ++ L L + FF + GS D +L
Sbjct: 1037 QKKTIRTSPVLHNLSSF-LLALTNLSTEGRIFFEKVVVDGGSKQYDIKL----------- 1084
Query: 449 NPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFG----TCL 504
S L+P F +A + ++IL GT+SP + + L T L
Sbjct: 1085 ----------SYMLLSPTYAFSSIATSARAVILAGGTMSPFQDYETHLFPSHPQHKITKL 1134
Query: 505 EAPHVI--------------------DVDL---------------QVLTSVI---STGPD 526
HVI + DL Q+ T+++ S PD
Sbjct: 1135 SCGHVIPSSNLCVWTLASMRPATPAGNSDLFEFSFQKRRDKTMIQQLGTAILNICSAVPD 1194
Query: 527 N----YPLNASYKTADGYKLMEKLCNRWRETGQ------WSRLNAKKPLFVEPKGGSQED 576
+P SY D +++ L + TG W +L ++K +F E KGGS +
Sbjct: 1195 GVVVFFP---SYGYLD--EVVAALQQKLAATGTAPNSSIWDKLQSRKAVFRETKGGSSDQ 1249
Query: 577 FEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVV 636
VL+ Y N+I G K A +++ + G L+ + + + + L C ++V
Sbjct: 1250 ---VLEDYSNAI-LGEKDAEGKQRSPSQNGALLLSVVGGKMSEGINFSDRLGRC--VVIV 1303
Query: 637 GIPFPNINDIQVSLKKKYNDTYRSSKNLLSGN---------------------------- 668
G+P+PN+ + + +Y D+ + L N
Sbjct: 1304 GLPYPNVASPEWKARMEYIDSSTVAGLLDKQNGTTAGDVSARESTPSATVTKPPSTITRE 1363
Query: 669 -----------EWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLR 717
++Y N RA+NQ+IGR IRHR DY AI+LLD RF ER RA + W+R
Sbjct: 1364 QAAAAGKQAARDFYENACMRAVNQSIGRAIRHRGDYAAIVLLDRRFGTERIRAKLPGWIR 1423
Query: 718 KSIKQYDSFDAS-LEGLKS----FFRDVKGWV 744
++ S + + L GL FFR+ K V
Sbjct: 1424 CAMAPIGSNEKTGLPGLMGTLNKFFREKKASV 1455
>gi|429327451|gb|AFZ79211.1| hypothetical protein BEWA_020580 [Babesia equi]
Length = 1094
Score = 97.8 bits (242), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 150/324 (46%), Gaps = 38/324 (11%)
Query: 443 IKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGT 502
I R++KN L+LW LNP+++F ++A + SII+ SGTL+P+ + + LG F T
Sbjct: 778 ITRNTKNDKLR----LNLWLLNPSLIFNEIATHAYSIIIASGTLTPIQALVNSLGPAFAT 833
Query: 503 -----CLEAPHVIDVDLQVLTSVISTGPDNYP---LNASYKTADGYKLMEKLCNRWRETG 554
L A V+ D Q + +++ P N L ++K + + + + N
Sbjct: 834 RLNNNILSATQVLSPD-QFMVFILTHIPHNEKIKRLECNFKESRDDQFVATVGNTIATLM 892
Query: 555 QWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSIS--QGSKCAVVRK-----KRVKREGN 607
L + LF + + K+ + +GS ++ K + +E N
Sbjct: 893 H--SLPGRTILFFPNRNLIVRCLSVWSKNAFEDGKGYKGSPIMIIDKITELKMNIYQETN 950
Query: 608 NDLNTIESQENANKKGASF-LAVCRGKI------------VVGIPFPNINDIQVSLKKKY 654
N E E + LAV R ++G+PFP+I QV + ++Y
Sbjct: 951 NASQFTEMLERIKRDDTCLILAVFRSHFSEGINLNLSSILLLGLPFPSIISPQVDVSRRY 1010
Query: 655 NDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISK 714
+ T + ++ N WY + FRA+NQAIGRCIR++ D G ++LLD R+ N +IS
Sbjct: 1011 HKTINNKCFNINYN-WYLRETFRAVNQAIGRCIRNKDDRGIVLLLDNRYT--LNLQYISS 1067
Query: 715 WLRKSIKQYDSFDASLEGLKSFFR 738
WL Y++ + ++ + S F+
Sbjct: 1068 WLHPYTFVYNNANKIVDYVDSNFK 1091
Score = 48.9 bits (115), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 67/164 (40%), Gaps = 52/164 (31%)
Query: 20 VGGIQVEFPYQPYGS-QLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
+ GI+V F Y QL + ++I L + +GH A+LESPTGTGK+ +++ L+W
Sbjct: 208 IHGIKVLFHYPTISKPQLQILSKLIYAL---KTNGH--AVLESPTGTGKTAAIISGVLSW 262
Query: 79 QQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNV 138
++ N ++S+P + +
Sbjct: 263 LYQSQITNTEDESANSEPKYKVI------------------------------------- 285
Query: 139 KKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYC 182
Y +RTH+QI Q+ + ++ +R LASRK C
Sbjct: 286 ---------YLTRTHAQIKQISTTIDQSCFRPQSCTLASRKILC 320
>gi|255718745|ref|XP_002555653.1| KLTH0G14300p [Lachancea thermotolerans]
gi|238937037|emb|CAR25216.1| KLTH0G14300p [Lachancea thermotolerans CBS 6340]
Length = 782
Score = 97.8 bits (242), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 152/699 (21%), Positives = 269/699 (38%), Gaps = 152/699 (21%)
Query: 146 IFYASRTHSQISQVISEYKKTA-YR---------VPMAVLASRKHYCTNKYVRDKEN--- 192
I Y SRT S+I + + E + YR L SRK+ C + VR +
Sbjct: 69 IIYCSRTMSEIEKALVELESLMDYRSKELGHKEHFRGLGLTSRKNLCLHPRVRKERKGTV 128
Query: 193 IDEECKLLL---GDRNLGCPQFKNVHKVRGHPSLQKGGCHE-----VHDIEDLVNVGQVV 244
+DE+C+ + R N+ H +L V+ E L+ +
Sbjct: 129 VDEKCRRMTNGQAARKAEQDPTANIELCDFHENLNTMDPENYVPVGVYSFEKLIKYCEER 188
Query: 245 RGCSYYAARSMADDAQLVFCPYSYIINPVI--RGAMEVDIKGAILILDEAHNIEDIARDA 302
C Y+ R M ++ Y Y+++P I R + EV + AI+I DEAHNI+++ ++
Sbjct: 189 TMCPYFTVRRMIAMCDIMIYSYHYLLDPKISERVSKEVS-RDAIVIFDEAHNIDNVCIES 247
Query: 303 GSVDIDEDVL----------------------LKLQMELEQVC----------SVNPMIY 330
S+D+ DVL +LQ E E++ + P +
Sbjct: 248 LSLDLTNDVLKRATKGANNLNEKIQEVRQVDSQRLQDEYEKLVNGLRAPDMLGAEEPPVE 307
Query: 331 QPLIEMTQDLV-----GWIERRK--ATLAKREFQHFFSCWTGDKALRELQEA-NISRQCF 382
P+ ++QDL+ G I R + + KR ++ T K L + E N Q
Sbjct: 308 SPV--LSQDLLSEAIPGNIRRAEHFVSFLKRFIEYL---KTRMKVLHVISETPNSFLQHL 362
Query: 383 PILLECATKAIKEATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKY 442
L K ++ ++ S L +S I + F + ++ + L ++ Y
Sbjct: 363 KQLTFIERKPLRFCSERLSLLVRTLEVSEIEEFTALKDIATFATLISTYEEGFVLIIEPY 422
Query: 443 IKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGT 502
++ P T CL+ ++ K V + S+I+TSGT+SP++ + L F T
Sbjct: 423 EIENAAVPNPIMRFT----CLDASIAIKPVFDKFSSVIITSGTISPLDMYPKMLN--FET 476
Query: 503 CLEAPHVIDVDLQ-VLTSVISTGPDNYPLNASYK---------------------TADG- 539
L+ + + + + L +++ G D +++ ++ T DG
Sbjct: 477 VLQESYAMTLAKKSFLPMIVTKGSDQVAISSRFEIRNDPSIVRNYGSMLVEFAKITPDGM 536
Query: 540 ------YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSK 593
Y ME + + W+ G + K + VE + + L+ Y + S G
Sbjct: 537 VVFFPSYLYMESIISMWQTMGILDEVWKYKLILVETPDAQETS--LALETYRKACSNG-- 592
Query: 594 CAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPN---INDIQVSL 650
+GA L+V RGK+ GI F + + + +
Sbjct: 593 ----------------------------RGAILLSVARGKVSEGIDFDHHFGRTVLMIGI 624
Query: 651 KKKYNDTYRSSKNL--------LSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDER 702
+Y ++ L + N++ A R Q +GR +R + DYG ++L D R
Sbjct: 625 PFQYTESRILKARLEFLREHYQIRENDFLSFDAMRHAAQCLGRVLRGKDDYGVMVLADRR 684
Query: 703 FQEERNRAHISKWLRKSIKQYD---SFDASLEGLKSFFR 738
F R + + KW+ + + D S D ++ K F R
Sbjct: 685 FA--RKKGQLPKWIAQGLSDADLNLSTDMAIANTKQFLR 721
Score = 44.3 bits (103), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 6/63 (9%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+++ + V FPY + Y Q +MC + TLD +++LE P+GTGK++SLL +
Sbjct: 3 FYIDDLPVIFPYPKIYPEQYQYMCDIKKTLD-----AGGNSILEMPSGTGKTVSLLSLAV 57
Query: 77 AWQ 79
A+Q
Sbjct: 58 AYQ 60
>gi|405117928|gb|AFR92703.1| general RNA polymerase II transcription factor [Cryptococcus
neoformans var. grubii H99]
Length = 773
Score = 97.8 bits (242), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 155/712 (21%), Positives = 270/712 (37%), Gaps = 173/712 (24%)
Query: 146 IFYASRTHSQISQVISEYKK-TAYRVPMAV---------LASRKHYCTNKYVRDKEN--- 192
+ Y SRT +I + ++E K+ YR M L SR++ C + V ++
Sbjct: 43 LIYCSRTVPEIEKALAELKRLMVYRAEMGANDGDFRGLGLTSRRNLCLHPEVSKEKKGKV 102
Query: 193 IDEECKLLLGDRNLGCPQFKNVHKVRGHP-SLQKGGCHE--------------VHDIEDL 237
+D C+ L C K R P S+ HE V+ ++D+
Sbjct: 103 VDSRCRDLTS--AFAC------EKGRTDPGSVPLCSFHEELNNYEPGNLIPPGVYTLDDV 154
Query: 238 VNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHN-- 294
GQ C Y+ R M +V + Y+++P + + ++ K +I+I DEAHN
Sbjct: 155 KKYGQEKGVCPYFTIRRMLPFLDVVIYSFHYLLDPKVAEQVSAEMSKESIVIFDEAHNID 214
Query: 295 ---IEDIARD---------AGSV--------DIDEDVLLKLQMELEQVCS---------- 324
IE ++ D A SV +I E KL+ E ++
Sbjct: 215 NVCIESLSIDLTRPMLDSAARSVNKLSDKIAEIKETDAKKLEDEYAKLVEGLQEANERAE 274
Query: 325 -----VNPMIYQPL--------IEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRE 371
V+P++ + + I + + +++R L R T L
Sbjct: 275 DEDMLVSPVLSKDMVDEAVPGNIRKAEHFIAFLKRFIEYLKTRMRVLHVVAETPQSFLAH 334
Query: 372 LQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSH 431
L+E Q L+ A++ + T EL +L S + F +L ++
Sbjct: 335 LKEITYIEQR---PLKFASERLTSLVRT-LELTNLEEHSALQKVAGFGTLV------ATY 384
Query: 432 VSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNS 491
+ L L+ Y + P + T CL+P++ V + S+++TSGT+SP++
Sbjct: 385 EKGFLLILEPYETEHATVPNPIFHFT----CLDPSLAIAPVFDRFASVVITSGTISPLDM 440
Query: 492 FSSELGVQFGTCLEAPHVIDVDLQV-LTSVISTGPDNYPLNASYKT-------------- 536
+ L QF +E + + + L VI+ G D P+++ ++
Sbjct: 441 YPKML--QFQPVMEQSYPMTLTRNAFLPMVITRGSDQVPISSRFEVRNDPAVVRNFGSIL 498
Query: 537 -------ADG-------YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLK 582
DG Y ME + + W + G S + K LFVE + I L+
Sbjct: 499 IEMARTVPDGVVAFFPSYLYMESIVSAWYDMGILSEVWKHKLLFVETPDAMETS--IALR 556
Query: 583 HYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPN 642
+Y RE N N +GA L+V RGK+ GI F +
Sbjct: 557 NY-------------------REACN-----------NGRGAVLLSVARGKVSEGIDFDH 586
Query: 643 IND---IQVSLKKKYNDT--------YRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRF 691
I + +Y ++ + + + N++ A R Q +GR +R +
Sbjct: 587 NYGRAVIMFGIPYQYTESRILKARLEFLRDNHRIRENDYLTFDAMRHAAQCVGRVLRGKT 646
Query: 692 DYGAIILLDERFQEERNRAHISKWLRKSIKQYD---SFDASLEGLKSFFRDV 740
D+G ++ D+RF + RA + KW+ I + S D ++ K F R +
Sbjct: 647 DWGLMVFADKRFARQDKRAKLPKWINSYITEAHSNLSTDVAVSLAKKFIRQI 698
>gi|325181104|emb|CCA15517.1| ATPdependent RNA helicase putative [Albugo laibachii Nc14]
Length = 587
Score = 97.8 bits (242), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 102/210 (48%), Gaps = 38/210 (18%)
Query: 128 TAQVAMNNKNVKKKMTPTIFYASRTHSQISQVISEYKKTAY--RVPMAVLASRKHYCTN- 184
T+ ++++ + K M IFY SRTHSQISQ + E +KT + +V L SRK C +
Sbjct: 210 TSSISISTEKCKGVMK--IFYCSRTHSQISQFVREMQKTKFGKQVRAITLGSRKLLCVHP 267
Query: 185 -------------------KYVRDK-ENIDEECKLLLGDRNLGCPQFKNVHKVRGHPSLQ 224
++V+ K E I C D++L ++KN
Sbjct: 268 RVSKLNSDIAMMEGCLDLLRHVKKKMEPISSSCSCAFYDQDL-LDEYKNY---------- 316
Query: 225 KGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKG 284
+HDIEDL +G + C YY R + AQ+V PY+ I++ R ++ +DIK
Sbjct: 317 --ALAHLHDIEDLHKLGHELAVCPYYGTRQSLELAQVVALPYTMILSAQTRESLGIDIKD 374
Query: 285 AILILDEAHNIEDIARDAGSVDIDEDVLLK 314
+I+I DEAHNI + +D DID ++K
Sbjct: 375 SIIIFDEAHNILETVQDIHRADIDSTEIIK 404
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 35/62 (56%), Gaps = 5/62 (8%)
Query: 17 AYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
A H FPY+PY QL FM + T++ + ESPTGTGKS+SL+C +L
Sbjct: 12 ANHFSASYFSFPYEPYSIQLDFMRSLWQTIENEHI-----GIFESPTGTGKSMSLICGSL 66
Query: 77 AW 78
+W
Sbjct: 67 SW 68
>gi|358057423|dbj|GAA96772.1| hypothetical protein E5Q_03443 [Mixia osmundae IAM 14324]
Length = 797
Score = 97.8 bits (242), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 150/692 (21%), Positives = 268/692 (38%), Gaps = 137/692 (19%)
Query: 146 IFYASRTHSQISQVISEYKKTA-YRVP--------MAV-LASRKHYCTNKYV-RDKEN-- 192
+ Y SRT +I + ++E K+ YR MA+ L+SRK+ C + + R+K+
Sbjct: 69 LVYCSRTVPEIEKALAELKRLMEYRRAAGCNDDGFMALGLSSRKNLCIHPTISREKKGKV 128
Query: 193 IDEECKLLL-------GDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVR 245
D +C+ L G + G + H+ G V+ +ED+ G+
Sbjct: 129 ADAKCRDLTSAWVCEKGRADPGSVELCEFHENLGQLEPGTQLPPAVYTLEDVKAYGEQQG 188
Query: 246 GCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGS 304
C Y+A R M A +V + Y+++P + + ++ K AI++ DEAHNI+++ ++ S
Sbjct: 189 ICPYFAVRRMLVHASVVIYSFHYLLDPKVAEQVSKEMSKDAIVVFDEAHNIDNVCIESLS 248
Query: 305 VDIDEDVLLKLQMELEQVCSVNPMIYQPLIEMTQD-LVGWIERRKATLAKREFQHFF-SC 362
+D+ +L + + I Q QD +E + A ++ F +
Sbjct: 249 IDLTRPMLDSAARSVTALTDKIKEIRQTDATKLQDEYARLVEGLQGAEADQDENAFMGNP 308
Query: 363 WTGDKALRELQEANISR-QCFPILLECATKAIKE--------ATDTESELPHLSGMSVI- 412
D L E NI R + F L + +K A S L HL ++ I
Sbjct: 309 VLPDDILNEAVPGNIRRAEHFVAFLARFVEYLKTRMRVLHVVAEKPASFLQHLKDITFIE 368
Query: 413 ----------------TLE-------GLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKN 449
TLE S + F + ++ + L L+ + ++
Sbjct: 369 KKPLRFCAERLTSLVRTLELTRIDEFSALSKVASFATLVATYDKGFLLILEPFETENATV 428
Query: 450 PGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHV 509
P L CL+ ++ K V + S+++TSGT+SP+ + L QF ++ +
Sbjct: 429 PNP----IFHLCCLDASLAIKPVFDRFSSVVITSGTISPLEMYPKML--QFTATVQESYA 482
Query: 510 IDVDLQ-VLTSVISTGPDNYPLNASYK---------------------TADG-------Y 540
+ + L VI+ G D +++ ++ DG Y
Sbjct: 483 MTLTRNCFLPLVITRGSDQVNISSRFEVRNDPAVVRNFGTILIEYAKAVPDGMVCFFPSY 542
Query: 541 KLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKK 600
ME + W + G + K +FVE ++ + L++Y + G
Sbjct: 543 LYMESIVAAWHDMGILNEAWKHKLIFVETPDAAET--SVALENYRRACDNG--------- 591
Query: 601 RVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNIND---IQVSLKKKYNDT 657
+GA L+V RGK+ GI F + I + +Y ++
Sbjct: 592 ---------------------RGAVLLSVARGKVSEGIDFDHHYGRCVIMFGIPYQYTES 630
Query: 658 --------YRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNR 709
+ ++ + N++ A R Q +GR +R + DYG ++ D RF + R
Sbjct: 631 RILKARLEFLRDEHRIRENDYLTFDAMRHAAQCVGRVLRGKTDYGLMVFADRRFAKADKR 690
Query: 710 AHISKWLRKSIKQYD---SFDASLEGLKSFFR 738
A + KW+ I S D +L K+F R
Sbjct: 691 AKLPKWINHYITDTASNLSTDMALVMSKNFLR 722
Score = 50.4 bits (119), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 48/83 (57%), Gaps = 6/83 (7%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+ + + V FPY + Y Q ++C + TLD G+C +LE P+GTGK++SLL +
Sbjct: 3 FFIDQLPVIFPYDRIYPEQYAYVCDLKRTLDAG---GNC--VLEMPSGTGKTVSLLSLIV 57
Query: 77 AWQQNCKLKNQLANISHSKPDTE 99
A+QQ+ + +L S + P+ E
Sbjct: 58 AYQQHYPERRKLVYCSRTVPEIE 80
>gi|281349618|gb|EFB25202.1| hypothetical protein PANDA_002012 [Ailuropoda melanoleuca]
Length = 897
Score = 97.8 bits (242), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 110/457 (24%), Positives = 184/457 (40%), Gaps = 121/457 (26%)
Query: 336 MTQDLVGWIERRKATLAK-RE------FQHFFSCWTGDKALRELQEANISRQCFPILLEC 388
+++ L G+ ER LA RE FQHF L+ LQ A P+
Sbjct: 503 ISRKLFGFTERYGTVLAASREQPRLAGFQHF---------LQSLQPAVTKTPVTPV---- 549
Query: 389 ATKAIKEATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSK 448
+ E+ +P L+ ++ +E ++LT +++G + Q +L +
Sbjct: 550 --------EEGEAGVPRLAS-PLMHIESFLAALTTA-NQDGRVILSRQGSLSQ------- 592
Query: 449 NPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSEL----GVQFGTCL 504
+L LNPAV F V + ++++ GT+ P++ F +L GV+ +
Sbjct: 593 -------SSLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPVSDFREQLLACAGVEAERVV 645
Query: 505 E--APHVIDVDLQVLTSVISTGPDNYPLNASYKTADGYKLMEK----LCN---------- 548
E HVI + +L VI +GP + L +Y+ + ++M++ LCN
Sbjct: 646 EFSCGHVIPPE-NILPLVICSGPSSQQLEFTYQKRELPQMMDETGRILCNLCTVVPGGVV 704
Query: 549 --------------RWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKC 594
W ++G +RL +K +F EPK +Q E VL Y I KC
Sbjct: 705 CFFPSYEYQRQVYAHWDKSGLLARLAVRKKIFQEPKRANQ--VEQVLMEYSRCI----KC 758
Query: 595 AVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIP 639
Q GA L+V GK ++VG+P
Sbjct: 759 C-------------------GQAGGTVTGALLLSVVGGKMSEGINFSDNLGRCVVMVGMP 799
Query: 640 FPNINDIQVSLKKKYND--TYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAII 697
+PNI ++ K Y D R G N +A+NQ+IGR IRH+ D+ +I+
Sbjct: 800 YPNIKSPELQEKMAYLDQTLPRGPGQPPPGKALVENLCMKAVNQSIGRAIRHQKDFASIV 859
Query: 698 LLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLK 734
LLD+R+ + W+R ++ +F + ++
Sbjct: 860 LLDQRYARPSILGKLPAWIRDRVEVKATFGLAFAAMR 896
Score = 80.9 bits (198), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 94/201 (46%), Gaps = 31/201 (15%)
Query: 146 IFYASRTHSQISQVISEYKKTAY--RVPMAVLASRKHYCTNKYVR---DKENIDEEC--- 197
I+Y SRTHSQ++Q + E +++ + + L SR++ C N+ V+ + I++ C
Sbjct: 229 IYYCSRTHSQLAQFVHEVQRSPFGKDTRLVSLGSRQNLCINEDVKTLSSAQLINDRCMEM 288
Query: 198 ---------------KLLLGDRNLGCP--QFKNVHKVRGHPSLQKGGCHEVHDIEDLVNV 240
K + CP ++ +H +R + V DIE LV +
Sbjct: 289 QRSKHEKNRAEEEKPKRRRQEHRAACPFYSYEQLHLLRDQVLVG------VKDIEQLVAL 342
Query: 241 GQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIAR 300
G+ R C YY +R AQLV PY +++ R A + ++G ++++DEAHN+ D
Sbjct: 343 GKEARACPYYGSRFAIPAAQLVVLPYQMLLHAATRQAAGIRLQGQVVLIDEAHNLIDTIT 402
Query: 301 DAGSVDIDEDVLLKLQMELEQ 321
S ++ L + +L Q
Sbjct: 403 SIHSAEVSGAQLCQAHSQLLQ 423
Score = 57.4 bits (137), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 40/67 (59%), Gaps = 5/67 (7%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
VGGI FP+ PY Q FM + L+ A + G + ESPTGTGKSLSL+C L+W
Sbjct: 8 VGGIHFPFPFTPYSIQKDFMAELYQVLE-AGKIG----IFESPTGTGKSLSLICGALSWL 62
Query: 80 QNCKLKN 86
++ + K
Sbjct: 63 RDFEQKK 69
>gi|154276530|ref|XP_001539110.1| DNA repair helicase RAD3 [Ajellomyces capsulatus NAm1]
gi|150414183|gb|EDN09548.1| DNA repair helicase RAD3 [Ajellomyces capsulatus NAm1]
Length = 683
Score = 97.4 bits (241), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 147/624 (23%), Positives = 258/624 (41%), Gaps = 136/624 (21%)
Query: 204 RNLGCPQFKNVHKVRGHPSLQKGGCHEVHD----------IEDLVNVGQVVRGCSYYAAR 253
R LG KN+ HPS+++ V D +++ G+ V C Y+
Sbjct: 29 RGLGLTSRKNLCL---HPSVKREKSGAVVDARCRSLTAGFVKEKKEKGEDVELCIYH--- 82
Query: 254 SMADDAQLVFCP-----YSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDI 307
++ FC Y Y+++P I + ++ K +I++ DEAHNI+++ ++ S+D+
Sbjct: 83 ------EMPFCKVIIYSYHYLLDPKIAERVSQELSKDSIVVFDEAHNIDNVCIESLSIDL 136
Query: 308 DEDVLLK-------LQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFF 360
ED L K L+ ++E++ + + L Q LV + R+A A++E Q
Sbjct: 137 TEDSLRKASRGANNLERKIEEMKRSDA---EKLQNEYQKLVEGL--READEARQEEQLMA 191
Query: 361 SCWTGDKALRELQEANISR-QCFPILLECATKAIK---EATDTESELP-----HLSGMSV 411
+ D L+E NI R + F L+ + +K + T T SE P HL ++
Sbjct: 192 NPALPDDLLKEAVPGNIRRAEHFVAFLKRFIEYLKTRMKITHTISETPLSFLAHLKDLTF 251
Query: 412 I-----------------TLEGL-------FSSLTYFFSRNGSHVSDYQLALQKYIKRDS 447
I TLE + + F + ++ + L L+ + +
Sbjct: 252 IERKPLRFCAERLTSLVRTLELMNLEDYQPLQQVAAFATLVATYEKGFLLILEPFESETA 311
Query: 448 KNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAP 507
P L CL+ A+ K V + S+I+TSGTLSP+ + L +F T L+
Sbjct: 312 TVPNP----ILHFTCLDAAIAIKPVFDRFSSVIVTSGTLSPLEMYPKML--KFTTVLQES 365
Query: 508 HVIDVDLQ-VLTSVISTGPDNYPLNASYK---------------------TADG------ 539
+ + + + L V++ G D +++S++ T DG
Sbjct: 366 YTMTLARRSFLPMVVTRGSDQAQISSSFQIRNDPGVVRNYGNLLLEFSRITPDGVVVFFP 425
Query: 540 -YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVR 598
Y ME + + W+ G + K + VE SQE + L+ Y + G ++
Sbjct: 426 SYLYMESIISMWQGMGILDLVWNYKLILVETP-DSQES-SLALETYRTACCNGRGAVLLC 483
Query: 599 KKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKY-NDT 657
R K D + + G R I +G+PF + + ++ +
Sbjct: 484 VARGKVSEGIDFD--------HHYG-------RAVICIGVPFQYTESRILKARLEFLREN 528
Query: 658 YRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLR 717
YR + N++ A R Q +GR IR + DYG +IL D RFQ + R + KW+
Sbjct: 529 YR-----IRENDFLSFDAMRHAAQCLGRVIRGKDDYGVMILADRRFQ--KRRTQLPKWIS 581
Query: 718 KSIKQYD---SFDASLEGLKSFFR 738
+++ + + S D ++ KSF R
Sbjct: 582 QAMLESETNLSTDMAVATAKSFLR 605
>gi|270006445|gb|EFA02893.1| DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 [Tribolium
castaneum]
Length = 817
Score = 97.4 bits (241), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 95/171 (55%), Gaps = 19/171 (11%)
Query: 144 PT-IFYASRTHSQISQVISEYKKTAY--RVPMAVLASRKHYCTNKYVRDKEN---IDEEC 197
PT IF SRTHSQ+SQ I E K+ + + +A LASR++YC N V +N I+E+C
Sbjct: 173 PTKIFICSRTHSQLSQFIGEILKSPFGKNIRVASLASRQNYCINPNVNKLKNNSLINEKC 232
Query: 198 -KLLLGDRNLGCPQFKNVHKVRGHPS------------LQKGGCHEVHDIEDLVNVGQVV 244
+ ++ K + K RG + L+ EV D+EDLV G+ +
Sbjct: 233 LDMQKQSKSQKDADGKTIKKPRGTTTKCPYYKQSTIEDLKDLTLTEVQDVEDLVKSGKEL 292
Query: 245 RGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNI 295
C YY++R A+DA++V PY+ I++ R A +D+K ++I+DEAHN+
Sbjct: 293 NACPYYSSRLAAEDAEVVLVPYNTILHKATREANGIDLKDNVIIIDEAHNL 343
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 126/287 (43%), Gaps = 37/287 (12%)
Query: 458 LSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLE------APHVID 511
L LNP F+D+ +L+ S+I+ GT+ P F + L + G E H+I
Sbjct: 527 LQFLLLNPTQNFEDIVKLARSVIVCGGTMKPNEEFRNRLFISSGVSPERIFEFSCGHIIP 586
Query: 512 VDLQVLTSVISTGPDNYPLNASYKTADGYKLMEKLCNRWR--ETGQWSRLNAKKPLFVEP 569
+ +L +++ G + L +++ + M +C T + L K + V
Sbjct: 587 PE-NILPVIMTEGANKEKLLFNFE-----RRMSMVCTPVTVPSTEYSTDLVVKGGIVVFF 640
Query: 570 KGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAV 629
+ E++ + +S G V R+ + ++ L + + + GA L+V
Sbjct: 641 PSYNYENW---VWQQIKDVSFGR--LVFREPQDSGSVDSVLKSYSDAVHKSNSGALLLSV 695
Query: 630 CRGK---------------IVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQ 674
GK IVVG+P+ NI + K + D S +G +Y +
Sbjct: 696 VGGKLSEGLNFSDDLGRCVIVVGLPYANITAPDLKEKMSHLDKIEGSG---AGKRFYESL 752
Query: 675 AFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIK 721
+A+NQ+IGR +RH+ DY I+LLDER+ + + W++KS+K
Sbjct: 753 CMKAVNQSIGRAVRHKNDYATILLLDERYNRTATKEALPDWIKKSLK 799
Score = 53.1 bits (126), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 31/53 (58%), Gaps = 5/53 (9%)
Query: 26 EFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
EFP+QPY Q FM + ++ + + ESPTGTGKSLS+LC + W
Sbjct: 8 EFPFQPYPIQHAFMRNLFEVIENKK-----FGIFESPTGTGKSLSILCGAIRW 55
>gi|346319590|gb|EGX89191.1| DNA repair helicase RAD3 [Cordyceps militaris CM01]
Length = 709
Score = 97.4 bits (241), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 140/645 (21%), Positives = 259/645 (40%), Gaps = 122/645 (18%)
Query: 175 LASRKHYCTNKYVRDKEN---IDEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHE- 230
L SRK+ C + V+ +++ +D C+ L F K RG +L H
Sbjct: 33 LTSRKNLCLHPSVKREKSGSVVDARCRSLTAG-------FVKEKKERGEDNLDLLESHNL 85
Query: 231 ----VHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDI-KGA 285
V + ++ G+ + C Y+ AR M +V Y Y+++P I + D K
Sbjct: 86 IPNGVWTFDGILRYGEENKQCPYFTARRMMQYCNVVIFSYHYLLDPKIAERVSKDFSKDC 145
Query: 286 ILILDEAHNIEDIARDAGSVDIDEDVLLKL----QMELEQVCSVNPMIYQPLIEMTQDLV 341
I++ DEAHNI+++ ++ S DI E+ L + Q +++ + + L + LV
Sbjct: 146 IVVFDEAHNIDNVCIESLSTDITEESLRRATRGAQNLKQKIADMRETDQEQLQNEYEKLV 205
Query: 342 GWIERRKATLAKREFQHFFSCWTGDKALRELQEANISR--------QCFPILLECATKAI 393
+ R+A A++E + ++ L+E NI R Q F L+ K
Sbjct: 206 QGL--READEARQEDAFMANPVLPEELLKEAVPGNIRRAEHFVSFLQRFIEYLKTRMKVR 263
Query: 394 KEATDTE-SELPHLSGMSVITLEGL------FSSLTYFFSRNGSHVSDYQ---------- 436
+ ++T S L HL + I + L +SL + +++ DYQ
Sbjct: 264 QVISETPPSFLAHLKEHTFIEKKPLGFCAERLTSLVR--TLELTNIEDYQPLQEVATFAT 321
Query: 437 ----------LALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTL 486
L L+ Y ++ P L CL+ A+ + + + S+I+TSGT+
Sbjct: 322 LVATYEKGFLLILEPYESDTAEVPNP----ILHFTCLDAAIAIRPIFDRFYSVIITSGTI 377
Query: 487 SPMNSFSSELGVQFGTCLEAPHVIDVDLQ-VLTSVISTGPDNYPLNASYK---------- 535
SP+ + L F T ++ + + + + L +++ G D ++ S++
Sbjct: 378 SPLEMYPKML--DFSTVIQESYSMTLARRSFLPMIVTRGSDQASISTSFQVRNEPSVVRN 435
Query: 536 -----------TADG-------YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDF 577
T DG Y ME + + W+ G + K + VE +
Sbjct: 436 YGNLLTEFAKITPDGLVVFFPSYLYMESIISMWQGMGILDEVWKYKLILVETPDAQETS- 494
Query: 578 EIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVG 637
+ L+ Y + G ++ R K D + ++ G R + +G
Sbjct: 495 -LALETYRTACCNGRGAILLCVARGKVSEGIDFD--------HQYG-------RTVLCIG 538
Query: 638 IPFPNINDIQVSLKKKY-NDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAI 696
+PF + + ++ +TYR + N++ A R Q +GR +R + DYG +
Sbjct: 539 VPFQYTESRILKARLEFLRETYR-----IKENDFLSFDAMRHAAQCLGRVLRGKDDYGIM 593
Query: 697 ILLDERFQEERNRAHISKWLRKSIKQYD---SFDASLEGLKSFFR 738
+L D RFQ + R + KW+ + + D S D ++ + F +
Sbjct: 594 VLADRRFQ--KKRPQLPKWINQGLMDVDVNLSTDMAVSSARRFLK 636
>gi|354492614|ref|XP_003508442.1| PREDICTED: probable ATP-dependent RNA helicase DDX11-like
[Cricetulus griseus]
Length = 771
Score = 97.4 bits (241), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 114/436 (26%), Positives = 172/436 (39%), Gaps = 112/436 (25%)
Query: 382 FPILLECATKAIKEATDTESELPHLSGMSVITLEG--LFSSLTYFFSR--NGSHVSDYQL 437
+P+LL AT+ ++ L G VI E L ++T +S NGS +
Sbjct: 363 YPMLLHAATR--------QAAGIRLQGQVVIIDEAHNLIDTITSIYSTEVNGSQLCQAYS 414
Query: 438 ALQKYIKRDSKNPGGN----WTHTLSLWCLNPAVVFKDVAE--LSLSIILTSGTLSPMNS 491
L +Y++R K TL L AV+ +V + + S++ T L +N
Sbjct: 415 QLLQYMERYGKRLKAKNLMYIKQTLYLLERFVAVLGGNVRQNPRTQSLLHTGSELKSIND 474
Query: 492 F-------------SSELGVQFGTC--LEAP--------HVIDVDLQVLTSVISTGPDNY 528
F S+ Q C +EA HVI D +L +I +GP N
Sbjct: 475 FLFQSQVDNINLFKVSDFRDQLLACSGVEAERVVEFSCGHVIPPD-NILPLIICSGPSNQ 533
Query: 529 PLNASYKTADGYKLMEK-------LCN---------------------RWRETGQWSRLN 560
L +Y+ D ++ME+ LCN W +TG +RL+
Sbjct: 534 QLEFTYQRRDLPQMMEETGRVLCNLCNVVPGGVVCFFPSYEYLRQIHAHWDKTGLLARLS 593
Query: 561 AKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENAN 620
KK LF EPK SQ E VL Y SKC + Q +
Sbjct: 594 VKKKLFQEPKRASQ--VEQVLMAY-------SKCIMCC----------------GQAGGH 628
Query: 621 KKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKKYNDTY--RSSKN 663
GA L+V GK ++VG+P+PNI ++ K Y D R+
Sbjct: 629 LTGALLLSVVAGKMSEGINFSDDLGRCVVMVGMPYPNIKSPELQEKMAYLDQTLPRTQGQ 688
Query: 664 LLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQY 723
G N +A+NQ+IGR IRH+ D+ +I+ LD R+ A + W+R ++
Sbjct: 689 APPGKVLVENLCMKAVNQSIGRAIRHQRDFASIVFLDHRYARPPVLAKLPAWIRDRVEVK 748
Query: 724 DSFDASLEGLKSFFRD 739
+F + L+ F R+
Sbjct: 749 ATFGPAFAALRKFHRE 764
Score = 81.3 bits (199), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 95/204 (46%), Gaps = 37/204 (18%)
Query: 146 IFYASRTHSQISQVISEYKKTAY--RVPMAVLASRKHYCTNKYVRDKENIDEECKLLLGD 203
I+Y SRTHSQ++Q I E +K+ + + L SR++ C N+ V+ ++ L+ D
Sbjct: 224 IYYCSRTHSQLAQFIHEVQKSPFGKETRLVSLGSRQNLCVNEDVKSLGSVQ-----LMND 278
Query: 204 R--------------------------NLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDL 237
R CP F N +++ L+ EV D+E L
Sbjct: 279 RCVDMQRSKHEKTGAGEDMPKKRRRRIQTSCP-FHNHEQMQ---LLRDEILLEVKDMEQL 334
Query: 238 VNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIED 297
V +G+ R C YY +R AQLV PY +++ R A + ++G ++I+DEAHN+ D
Sbjct: 335 VALGKEARACPYYGSRFAIPAAQLVVLPYPMLLHAATRQAAGIRLQGQVVIIDEAHNLID 394
Query: 298 IARDAGSVDIDEDVLLKLQMELEQ 321
S +++ L + +L Q
Sbjct: 395 TITSIYSTEVNGSQLCQAYSQLLQ 418
Score = 43.5 bits (101), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 54/122 (44%), Gaps = 9/122 (7%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+GGI FP+ PY Q FM + L+ + + ESPTGTGKSLSL+C L+W
Sbjct: 8 IGGIHFPFPFPPYPIQKDFMAELYKVLEAGK-----IGIFESPTGTGKSLSLICGALSWL 62
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVK 139
++ + K A P + P G +P P P T + + V+
Sbjct: 63 RDFEQKRLQAEARLLAPG----SGPTCGGKNSLPPCSPCQEPCDTPRPAGEPDWVTEFVQ 118
Query: 140 KK 141
KK
Sbjct: 119 KK 120
>gi|345492904|ref|XP_001602139.2| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8-like [Nasonia vitripennis]
Length = 869
Score = 97.4 bits (241), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 136/314 (43%), Gaps = 53/314 (16%)
Query: 458 LSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFG------TCLEAPHVID 511
L LNPA F D+ + + +++L GT+ PM+ F +L + G HVI
Sbjct: 564 LKFLLLNPAAHFADIVQEARAVVLAGGTMEPMSEFKEQLFISAGAKSERIVTFSCDHVIP 623
Query: 512 VDLQVLTSVISTGPDNYPLNASYKTADGYKLMEKL-------CN---------------- 548
+ +LT ++ TGP +++ K++++L CN
Sbjct: 624 KE-NILTCILKTGPTGIDFEFNFQNRQNTKMLDELGRTLVNLCNIVPAGLVVFLPSYSYE 682
Query: 549 -----RWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVK 603
G +++ KK +F EPK +Q +L+ Y ++ K
Sbjct: 683 DLLFKHLESNGVLTKIRTKKTVFREPKSTTQ--VNQILEKYASAAKTPQK---------P 731
Query: 604 REGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYNDTYRSSKN 663
+ G + + + + + L C IVVG+P+PN+ ++ K KY + N
Sbjct: 732 QNGAILFSVVGGKLSEGLNFSDDLGRCV--IVVGMPYPNVKSPELQEKMKY---LNENVN 786
Query: 664 LLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQY 723
+G+ +Y N +A+NQ IGR +RH DY ++LLD R+ + + W+++++
Sbjct: 787 PNAGSVFYENSCMKAVNQCIGRAVRHIADYSTVVLLDRRYSNKTK--SLPGWIQRTLTIQ 844
Query: 724 DSFDASLEGLKSFF 737
+F + ++ L FF
Sbjct: 845 PNFGSCVQALARFF 858
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 94/171 (54%), Gaps = 17/171 (9%)
Query: 146 IFYASRTHSQISQVISEYKKTAY--RVPMAVLASRKHYCTNKYVRDKENID---EECKLL 200
IF+ SRTHSQ+SQ + E KK+ Y +V + LASR +YC N V+ ++I+ ++C+ L
Sbjct: 202 IFFCSRTHSQLSQFVGELKKSPYFDKVSLVSLASRNNYCINSKVKALKSINLINDQCQQL 261
Query: 201 LGDRNLGCPQFKNVHKVRGHPS----------LQKGGCHEVHDIEDLVNVGQVVRGCSYY 250
+ Q K++ + + S L + DIE+ V + + ++ C YY
Sbjct: 262 -QKKKATSKQEKDLKRSKTSTSCPFMPGDQSLLMAEILTSIRDIEETVKLSEEIKTCPYY 320
Query: 251 AARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHN-IEDIAR 300
+ R +D Q++ PY+ I++ R + +++K ILI+DEAHN +E I R
Sbjct: 321 STRKSVEDGQVILVPYNSILHKNTRVSSGINLKNNILIVDEAHNLLEAIER 371
>gi|91081131|ref|XP_975541.1| PREDICTED: similar to regulator of telomere elongation helicase 1
rtel1 [Tribolium castaneum]
Length = 861
Score = 97.4 bits (241), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 95/171 (55%), Gaps = 19/171 (11%)
Query: 144 PT-IFYASRTHSQISQVISEYKKTAY--RVPMAVLASRKHYCTNKYVRDKEN---IDEEC 197
PT IF SRTHSQ+SQ I E K+ + + +A LASR++YC N V +N I+E+C
Sbjct: 173 PTKIFICSRTHSQLSQFIGEILKSPFGKNIRVASLASRQNYCINPNVNKLKNNSLINEKC 232
Query: 198 -KLLLGDRNLGCPQFKNVHKVRGHPS------------LQKGGCHEVHDIEDLVNVGQVV 244
+ ++ K + K RG + L+ EV D+EDLV G+ +
Sbjct: 233 LDMQKQSKSQKDADGKTIKKPRGTTTKCPYYKQSTIEDLKDLTLTEVQDVEDLVKSGKEL 292
Query: 245 RGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNI 295
C YY++R A+DA++V PY+ I++ R A +D+K ++I+DEAHN+
Sbjct: 293 NACPYYSSRLAAEDAEVVLVPYNTILHKATREANGIDLKDNVIIIDEAHNL 343
Score = 80.5 bits (197), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 131/290 (45%), Gaps = 46/290 (15%)
Query: 458 LSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLE------APHVID 511
L LNP F+D+ +L+ S+I+ GT+ P F + L + G E H+I
Sbjct: 527 LQFLLLNPTQNFEDIVKLARSVIVCGGTMKPNEEFRNRLFISSGVSPERIFEFSCGHIIP 586
Query: 512 VDLQVLTSVISTGPDNYPL--NASYKTADG---YKLMEKLCNRWR------------ETG 554
+ +L +++ G + L N + + G +++ ++C + E
Sbjct: 587 PE-NILPVIMTEGANKEKLLFNFERRMSMGGCIKRILVEVCKVVKGGIVVFFPSYNYENW 645
Query: 555 QWSRL---NAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLN 611
W ++ + + +F EP+ D VLK Y +++ + + A++ L+
Sbjct: 646 VWQQIKDVSFGRLVFREPQDSGSVD--SVLKSYSDAVHKSNSGALL------------LS 691
Query: 612 TIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSGNEWY 671
+ + + + L C IVVG+P+ NI + K + D S +G +Y
Sbjct: 692 VVGGKLSEGLNFSDDLGRCV--IVVGLPYANITAPDLKEKMSHLDKIEGSG---AGKRFY 746
Query: 672 CNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIK 721
+ +A+NQ+IGR +RH+ DY I+LLDER+ + + W++KS+K
Sbjct: 747 ESLCMKAVNQSIGRAVRHKNDYATILLLDERYNRTATKEALPDWIKKSLK 796
Score = 53.1 bits (126), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 31/53 (58%), Gaps = 5/53 (9%)
Query: 26 EFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
EFP+QPY Q FM + ++ + + ESPTGTGKSLS+LC + W
Sbjct: 8 EFPFQPYPIQHAFMRNLFEVIENKK-----FGIFESPTGTGKSLSILCGAIRW 55
>gi|393220578|gb|EJD06064.1| DNA repair helicase [Fomitiporia mediterranea MF3/22]
Length = 800
Score = 97.1 bits (240), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 155/742 (20%), Positives = 288/742 (38%), Gaps = 179/742 (24%)
Query: 122 PSTNGQTAQVAMNNKNVKKKMTPT---IFYASRTHSQISQVISEYKKTA-YRVPMAV--- 174
PS G+T + ++ ++ PT + Y SRT +I + ++E K+ YR+ A
Sbjct: 43 PSGTGKTVSL-LSLIVSYQQFYPTKRKLIYCSRTVPEIEKALAELKRLMEYRIQHAETEE 101
Query: 175 ------------LASRKHYCTNKYV---RDKENIDEECKLLLGDRNLGCPQFKNVHKVRG 219
L SRK+ C + V R +D C+ L + + R
Sbjct: 102 ERQKERAFTGVGLTSRKNLCLHPEVSKERKGVVVDARCRDLTSAFTM--------ERARN 153
Query: 220 HP-SLQKGGCHE--------------VHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFC 264
+P S+ H+ +H + D++ G+ C Y+ R M ++
Sbjct: 154 NPGSVPTCSFHDELEAFEPGNLIPPGIHTLADVLQYGRDKGVCPYFTVRRMMAFVDVIIY 213
Query: 265 PYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVL-------LKLQ 316
+ Y+++P + + DI K AI++ DEAHNI+++ ++ S+D+ +L +L
Sbjct: 214 SFHYLLDPKVAEQVSKDISKDAIVVFDEAHNIDNVCLESLSIDLTRPMLDSAARSVTRLG 273
Query: 317 MELEQVCSVNPMI----YQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALREL 372
++E++ + Y L+E Q+ A A++E + D L+E
Sbjct: 274 DKIEEIKITDASRLQDEYAKLVEGLQE---------ADEARQEDAIMANPVLPDDLLKEA 324
Query: 373 QEANISR--------QCFPILLECATKAIKEATDTE-SELPHLSGMSVIT---------- 413
NI + + F L+ + + +T S L HL ++ I
Sbjct: 325 VPGNIRKAEHFVAFLKRFVEYLKTRMRVLHVVAETPLSFLQHLKDITFIERRPLRFCAER 384
Query: 414 LEGLFSSLTY--------------FFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLS 459
L+ L +L F + ++ + L L+ + ++ P + T
Sbjct: 385 LQSLVRTLELTNLDEYASLQKVANFATLVATYEKGFLLILEPFETDNATVPNPIFHFT-- 442
Query: 460 LWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQ-VLT 518
CL+P++ V E S+++TSGT+SP++ + L QF ++ + + + L
Sbjct: 443 --CLDPSLAIAPVFERFSSVVITSGTISPLDMYPKML--QFTPVVQETYAMTLTRNSFLP 498
Query: 519 SVISTGPDNYPLNASYK---------------------TADG-------YKLMEKLCNRW 550
VI+ G D +++ ++ DG Y ME + W
Sbjct: 499 LVITRGSDQVAISSRFEVRNDPAVVRNFGAILVEYSKIVPDGIAAFFPSYLYMESIVAAW 558
Query: 551 RETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDL 610
+ G + + K +FVE ++ I L++Y +R NN
Sbjct: 559 NDMGILNEVWKHKLIFVETPDANET--SIALENY------------------RRACNNG- 597
Query: 611 NTIESQENANKKGASFLAVCRGKIVVGIPFP-NINDIQVSLKKKYNDT--------YRSS 661
+GA L+V RGK+ GI F N + + +Y ++ Y
Sbjct: 598 -----------RGAVLLSVARGKVSEGIDFDHNYGRAVIIVPYQYTESRILKARLEYLRD 646
Query: 662 KNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIK 721
+ +E+ A R Q +GR +R + D+G ++ D+RF RA + +W+ + I
Sbjct: 647 AYRIRESEFLGFDAMRNAAQCVGRVLRGKTDWGLMVFADKRFARADKRAKLPRWINQYIT 706
Query: 722 QYD---SFDASLEGLKSFFRDV 740
+ S D +L K F R +
Sbjct: 707 ETAANLSTDMALVLSKLFMRQI 728
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 6/83 (7%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+ + + + FPY + Y Q +MC + TLD + GHC +LE P+GTGK++SLL +
Sbjct: 3 FLIDDLPIIFPYDRIYPEQYQYMCDLKRTLDAS---GHC--VLEMPSGTGKTVSLLSLIV 57
Query: 77 AWQQNCKLKNQLANISHSKPDTE 99
++QQ K +L S + P+ E
Sbjct: 58 SYQQFYPTKRKLIYCSRTVPEIE 80
>gi|47221017|emb|CAG12711.1| unnamed protein product [Tetraodon nigroviridis]
Length = 759
Score = 97.1 bits (240), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 174/781 (22%), Positives = 303/781 (38%), Gaps = 121/781 (15%)
Query: 20 VGGIQVEFPYQ-PYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
+ G+ V FPY Y Q +M + TLD H +LE P+GTGK++SLL +A+
Sbjct: 4 IDGLLVYFPYDYIYPEQYSYMLELKRTLD-----AKGHGVLEMPSGTGKTISLLSLIVAY 58
Query: 79 QQNCKLK-NQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKN 137
Q+ L+ +L S + P+ E V + L + T N +A++++
Sbjct: 59 QKAFPLEVTKLIYCSRTVPEIEKVVEELRKLLEYY------TKQTGENNNFLALALSSRK 112
Query: 138 ---VKKKMTPTIF---YASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVR-DK 190
+ +++ F + HS + I + + VP + + +K + +K
Sbjct: 113 NLCIHPEVSALRFGKEVDGKCHSLTASYIRAQRHSDSNVPACRFFEVRPFLVSKTLTLEK 172
Query: 191 ENIDEECKLLLGDRNLGCPQF--------KNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQ 242
+ + ++LL + C ++ V L G +++++DL + G+
Sbjct: 173 CSQTVQTEILLEKKGPNCSNLPPRGALCLQDFDAVGRQVPLPAG----IYNLDDLKDFGR 228
Query: 243 VVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARD 301
C YY AR A +V Y Y+++P I + ++ K ++++ DEAHNI+++ D
Sbjct: 229 RKGWCPYYLARYSILHANIVVYSYHYLLDPKIADLVSKELAKKSVVVFDEAHNIDNVCID 288
Query: 302 AGSVDIDEDVLLKLQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFS 361
+ SV+I L + C N ++ Q + I+ A K E++
Sbjct: 289 SMSVNITRRTLDR--------CQGN-------VDTLQRTIHKIKETDAAKLKEEYR---- 329
Query: 362 CWTGDKALRELQEANISRQ--------CFP--ILLECATKAIKEATDTESELPHLSGMSV 411
+ + L+EANI+R+ P IL A +A A D + H +
Sbjct: 330 -----RLVEGLKEANIARETDVYLSNPVLPDEILQGSARRATVAAQDA-GDRRHRRLLRC 383
Query: 412 ITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIK---RDSKNPGGNWTHTLSLWCLNPAVV 468
+ F G HV + + D PG TLS + P ++
Sbjct: 384 YSHRQ--------FRHPGQHVQSRFYHHHRAFRGQNSDHCQPGAAL-QTLSPLDIYPKIL 434
Query: 469 -FKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPH---VIDVDLQVLTSVISTG 524
F+ V S ++ L L P+ V + E VI +L + S
Sbjct: 435 DFRPVTMASFTMTLARTCLCPLIIGRGNDQVALSSKFETREDFAVIRNYGNLLLEMSSIV 494
Query: 525 PDNYPLNASYKTADGYKLMEKLCNRWRETGQWSR--------LNAKKPLFVEPKGGSQED 576
PD ++ T+ Y ME + W E R K FV KG +
Sbjct: 495 PDGI---VAFFTS--YVYMENIVASWYEQVSVHRRISVCNTACTQIKAYFVFFKGILENI 549
Query: 577 FEIVLKHYYNSISQGSKCAVVRKKRVK-REGNNDLNTIESQENANKKGASFLAVCRGKIV 635
+ L + + A+ + + V+ R + L E N +GA L+V RGK+
Sbjct: 550 QKNKLIFIETPDAAETSMALEKYQEVRDRCHDGHLRACE-----NGRGAILLSVARGKVS 604
Query: 636 VGIPF-------------PNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQA 682
GI F P + LK + Y + N++ A R Q
Sbjct: 605 EGIDFVHHFGRAVIMFGVPYVYTQSRILKARLE--YLRDHFQIRENDFLTFDAMRHAAQC 662
Query: 683 IGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYD---SFDASLEGLKSFFRD 739
+GR IR + DYG +I D+R+ R + +W+++ I + D +++ K F R
Sbjct: 663 VGRAIRGKTDYGLMIFADKRYARMDKRGKLPRWIQEHISDGSLNLTLDEAVQLSKHFLRQ 722
Query: 740 V 740
+
Sbjct: 723 M 723
>gi|322801298|gb|EFZ21985.1| hypothetical protein SINV_11349 [Solenopsis invicta]
Length = 908
Score = 97.1 bits (240), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 140/329 (42%), Gaps = 83/329 (25%)
Query: 458 LSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTC------LEAPHVID 511
+ LNPA F D+ + S++L GT+ PM+ F +L + G HVI
Sbjct: 606 IKFLLLNPAAHFHDIVRDARSVVLAGGTMEPMSEFIDQLFLMAGATSDRIMTFSCDHVIP 665
Query: 512 VDLQVLTSVISTGPDNYPLNASYKTADGYKLMEKL-------CN---------------- 548
+ ++++V+ GP ++ +L+++L CN
Sbjct: 666 KE-NIISNVVMRGPTGVEFEFNFHNRQDTRLLDELGRALLNLCNVVPAGIVAFFPSYNYE 724
Query: 549 -----RWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVK 603
++G ++++AKK ++ EPK SQ + +L Y +SI
Sbjct: 725 DTVFKHLDKSGIITKISAKKCIYREPKSASQVN--TILDQYAHSIKN------------- 769
Query: 604 REGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQV 648
SQ N GA +V GK IV+G+P+PNI ++
Sbjct: 770 -----------SQSPCN--GALLFSVVGGKLSEGLNFSDDLGRCVIVIGLPYPNIKSPEL 816
Query: 649 SLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERN 708
K KY + + +G+ +Y N +A+NQ IGR +RH DY ++LLD+R+ +
Sbjct: 817 QEKMKYLNEHVKPD---AGSSFYENSCMKAVNQCIGRSVRHINDYSTVVLLDKRYCHKVK 873
Query: 709 RAHISKWLRKSIKQYDSFDASLEGLKSFF 737
+ +W+++S+ DSF + + + FF
Sbjct: 874 V--LPQWIQRSVTINDSFGSVIGNIAKFF 900
Score = 76.6 bits (187), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 99/231 (42%), Gaps = 60/231 (25%)
Query: 146 IFYASRTHSQISQVISEYKKTAYR-----VPMA--------------------------- 173
IF+ SRTHSQ++Q + E KK+ Y VP++
Sbjct: 195 IFFCSRTHSQLTQFVHELKKSPYSQDISVVPLSSRYFSFVFNIYESYLLFIFNIYEHIAQ 254
Query: 174 ----VLAS--RKHYCTNKYVRDKENID---EECKLLLGDRNL--------------GCPQ 210
+L S R++YC NK V+ ++I+ E C L + GCP
Sbjct: 255 FFINILLSNFRQNYCINKSVKRLKHINLINEICLQLQRKKTTVKKEKGLKKSKTTRGCPF 314
Query: 211 FKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYII 270
K+ L + D+E+++ GQ C YY++R + QL+ PY+ I+
Sbjct: 315 IPGDQKL-----LMAEILSNIQDVEEIMERGQENNTCPYYSSRKSVQNGQLILVPYNSIL 369
Query: 271 NPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQ 321
+ R ++ +D+KG +LI+DEAHN+ D S I LL +L Q
Sbjct: 370 HKNTRTSLGIDLKGNVLIIDEAHNLLDAIEGMHSSLITGRNLLHCYSQLSQ 420
Score = 40.4 bits (93), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 19/27 (70%)
Query: 52 DGHCHALLESPTGTGKSLSLLCSTLAW 78
+G L ESPTGTGKSLSL+C L W
Sbjct: 29 EGGKLGLFESPTGTGKSLSLICGALKW 55
>gi|195432086|ref|XP_002064057.1| GK19963 [Drosophila willistoni]
gi|194160142|gb|EDW75043.1| GK19963 [Drosophila willistoni]
Length = 848
Score = 97.1 bits (240), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 129/318 (40%), Gaps = 57/318 (17%)
Query: 457 TLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEA------PHVI 510
T LNPA F D+ + +I++ GT+ P +L F C E HV+
Sbjct: 552 TFKYLLLNPAEHFSDIVNQARAIVIAGGTMKPTEELIEQL---FANCTERVVERFYDHVV 608
Query: 511 DVDLQVLTSVISTGPD------NYPLNASYKTAD----------------------GYKL 542
D VL I+ GP NY S K Y
Sbjct: 609 PPD-AVLPFAITKGPTGTNLCFNYTQRGSSKMLTELSMILQNLCQVLPHGLVCFLPSYDY 667
Query: 543 MEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRV 602
++++ + G +R+ +K +F E GG E +L+ Y +IS + V
Sbjct: 668 LDQVYKHLEQCGALARIAKRKRIFRESSGGG--SVEQLLQLYAEAISSEDNGGALLLSVV 725
Query: 603 KREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYNDTYRSSK 662
+ + LN ++ + RG IVVG+P+PN ++ + ++ D
Sbjct: 726 GGKLSEGLNFADN-------------LGRGVIVVGLPYPNRTSPELQERMRHLDEKLGPG 772
Query: 663 NLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWL-RKSIK 721
+GNE+Y N +A+NQ IGR +RH DY + LLDER+ ER + + +W+ R +
Sbjct: 773 ---AGNEYYENLCMKAVNQCIGRSVRHIRDYACVYLLDERYAAERIQQKLPRWIARHMVT 829
Query: 722 QYDSFDASLEGLKSFFRD 739
F G FF++
Sbjct: 830 ANQRFGQVQAGTVKFFKE 847
Score = 84.0 bits (206), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/181 (35%), Positives = 94/181 (51%), Gaps = 27/181 (14%)
Query: 146 IFYASRTHSQISQVISEYKKTAYR--VPMAVLASRKHYCTNKYVRDKENI---DEECKLL 200
IFY SRTHSQ+SQ++SE +KT++ V L SR+ C N +V+ ++ +E C +
Sbjct: 194 IFYCSRTHSQLSQIVSELRKTSHSQWVRSISLGSRQQLCINPHVKRLSSVSLMNERCLDM 253
Query: 201 LGDRNLGCPQFKNVHKVRGHPSLQKGGC----------------HEVHDIEDLVNVGQVV 244
+ P K+ ++ GGC E DIEDLVN GQ
Sbjct: 254 AKSKTKANPSKKSRLEISS-----SGGCAFKVPTQVDHLRDLALSEPVDIEDLVNQGQTA 308
Query: 245 RGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIED-IARDAG 303
R C YYA+R AQL+ PY ++ R + ++I G+I+I+DEAHN+ D +A+ G
Sbjct: 309 RACPYYASRLAQQKAQLILLPYQLLLQKSARQQLGIEISGSIVIIDEAHNLLDTLAQLHG 368
Query: 304 S 304
S
Sbjct: 369 S 369
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 38/69 (55%), Gaps = 7/69 (10%)
Query: 13 KPLNAYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLL 72
KPLN + + FPY+PY Q M +V L+ Q + ESPTGTGKSL+L
Sbjct: 8 KPLNTPN--ETEFGFPYEPYEIQGQLMQQVFQVLESKQ-----IGIFESPTGTGKSLTLT 60
Query: 73 CSTLAWQQN 81
C+ L W Q+
Sbjct: 61 CAALTWLQH 69
>gi|125551293|gb|EAY97002.1| hypothetical protein OsI_18924 [Oryza sativa Indica Group]
Length = 877
Score = 96.7 bits (239), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 91/185 (49%), Gaps = 36/185 (19%)
Query: 142 MTPTIFYASRTHSQISQVISEYKKT--AYRVPMAVLASRKHYCTNKYVR---DKENIDEE 196
+TP +F+ SRTHSQ+SQ + E KKT +R+ L SRK+ C NK V I+E
Sbjct: 190 VTPKVFFTSRTHSQLSQFVGELKKTEFGWRLRTVCLGSRKNLCINKDVLKLGSANRINER 249
Query: 197 C-------------------KLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVH----- 232
C K+ + GCP + RG LQK EV
Sbjct: 250 CLELQKSKKSSKTKVEGDNRKVCQSKTSCGCPMIRK----RG---LQKEFKSEVSEQGAL 302
Query: 233 DIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEA 292
DIEDL +G+ + C YY AR M A LV PY ++ R ++ +++K +++I+DEA
Sbjct: 303 DIEDLAQLGKKIGTCPYYGARDMVRTADLVVLPYQSLLLKSARESLGLNLKNSVVIIDEA 362
Query: 293 HNIED 297
HN+ D
Sbjct: 363 HNLAD 367
Score = 79.3 bits (194), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 127/313 (40%), Gaps = 104/313 (33%)
Query: 468 VFKDVAELSLSIILTSGTLSPMNSFSSEL-------GVQFGTCLEAPHVIDVDLQVLTSV 520
+F ++ + ++IL GTL P+ L ++F TC H++ + +L
Sbjct: 544 IFLEITCDAYAVILAGGTLQPIEETRLRLFPNLPPSDIKFFTC---NHIVPPE-SILPIA 599
Query: 521 ISTGPDNYPLNASYKTADGYKLMEKL----CN------------------------RWRE 552
++ GP + SY + + ++E+L CN W
Sbjct: 600 VTRGPSGKAFDFSYSSRSSHTMIEELGRFLCNVVTTVPEGVVMFFASYEYERFVYDAWAA 659
Query: 553 TGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNT 612
+G S+++ KK +F EPK + D E+ L Y +I SK
Sbjct: 660 SGMISKISKKKHVFREPK--NSVDVEMTLNKYKEAIQSCSK------------------- 698
Query: 613 IESQENANKKGASFLAVCRGKI---------------VVGIPFPNINDIQVSLKKKY--- 654
S ++ GA LAV GKI +VG+P+P+ +D++++ KY
Sbjct: 699 --SSQDTGVTGALLLAVVGGKISEGINFSDGMGRCVVMVGLPYPSPSDVELTETIKYIEN 756
Query: 655 --------NDTYRSSK-----------NLL-----SGNEWYCNQAFRALNQAIGRCIRHR 690
D SSK ++L G E+Y N +A+NQ+IGR IRH
Sbjct: 757 ISKPVLVGGDNSSSSKYDDECKLQPGFDILRKCNKGGREYYENLCMKAVNQSIGRAIRHA 816
Query: 691 FDYGAIILLDERF 703
DY A++L+D R+
Sbjct: 817 NDYAAMLLVDSRY 829
Score = 49.7 bits (117), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Query: 27 FPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
FP+ PY Q FM + L ALLESPTGTGK+LS++CS L W
Sbjct: 18 FPFAPYPIQSEFMSFLYGALSSGP---GALALLESPTGTGKTLSIICSALQW 66
>gi|46981234|gb|AAT07552.1| unknown protein [Oryza sativa Japonica Group]
Length = 845
Score = 96.7 bits (239), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 91/185 (49%), Gaps = 36/185 (19%)
Query: 142 MTPTIFYASRTHSQISQVISEYKKT--AYRVPMAVLASRKHYCTNKYVR---DKENIDEE 196
+TP +F+ SRTHSQ+SQ + E KKT +R+ L SRK+ C NK V I+E
Sbjct: 158 VTPKVFFTSRTHSQLSQFVGELKKTEFGWRLRTVCLGSRKNLCINKDVLKLGSANRINER 217
Query: 197 C-------------------KLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVH----- 232
C K+ + GCP + RG LQK EV
Sbjct: 218 CLELQKSKKSSKTKVEGDNRKVCQSKTSCGCPMIRK----RG---LQKEFKSEVSEQGAL 270
Query: 233 DIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEA 292
DIEDL +G+ + C YY AR M A LV PY ++ R ++ +++K +++I+DEA
Sbjct: 271 DIEDLAQLGKKIGTCPYYGARDMVRTADLVVLPYQSLLLKSARESLGLNLKNSVVIIDEA 330
Query: 293 HNIED 297
HN+ D
Sbjct: 331 HNLAD 335
Score = 79.0 bits (193), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 127/313 (40%), Gaps = 104/313 (33%)
Query: 468 VFKDVAELSLSIILTSGTLSPMNSFSSEL-------GVQFGTCLEAPHVIDVDLQVLTSV 520
+F ++ + ++IL GTL P+ L ++F TC H++ + +L
Sbjct: 512 IFLEITCDAYAVILAGGTLQPIEETRLRLFPNLPPSDIKFFTC---NHIVPPE-SILPIA 567
Query: 521 ISTGPDNYPLNASYKTADGYKLMEKL----CN------------------------RWRE 552
++ GP + SY + + ++E+L CN W
Sbjct: 568 VTRGPSGKAFDFSYSSRSSHTMIEELGRFLCNVVTTVPEGVVMFFASYEYERFVYDAWAA 627
Query: 553 TGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNT 612
+G S+++ KK +F EPK + D E+ L Y +I SK
Sbjct: 628 SGMISKISKKKHVFREPK--NSVDVEMTLNKYKEAIQSCSK------------------- 666
Query: 613 IESQENANKKGASFLAVCRGKI---------------VVGIPFPNINDIQVSLKKKY--- 654
S ++ GA LAV GKI +VG+P+P+ +D++++ KY
Sbjct: 667 --SSQDTGVTGALLLAVVGGKISEGINFSDGMGRCVVMVGLPYPSPSDVELTETIKYIEN 724
Query: 655 --------NDTYRSSK-----------NLL-----SGNEWYCNQAFRALNQAIGRCIRHR 690
D SSK ++L G E+Y N +A+NQ+IGR IRH
Sbjct: 725 ISKPVLVGGDNSSSSKYDDECKLQPGFDILRKCNKGGREYYENLCMKAVNQSIGRAIRHA 784
Query: 691 FDYGAIILLDERF 703
DY A++L+D R+
Sbjct: 785 NDYAAMLLVDSRY 797
Score = 42.0 bits (97), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/22 (77%), Positives = 20/22 (90%)
Query: 57 ALLESPTGTGKSLSLLCSTLAW 78
ALLESPTGTGK+LS++CS L W
Sbjct: 16 ALLESPTGTGKTLSIICSALQW 37
>gi|452820568|gb|EME27609.1| DNA excision repair protein ERCC-2 [Galdieria sulphuraria]
Length = 751
Score = 96.3 bits (238), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 144/682 (21%), Positives = 252/682 (36%), Gaps = 161/682 (23%)
Query: 146 IFYASRTHSQISQVISEYKKT-AYRVPMAV------------LASRKHYCTNKYVRD--- 189
+ Y +RT +I +V+ E ++ AYR V L +R++ C V+D
Sbjct: 45 LIYCTRTVGEIDKVLEELERVLAYRRDCNVDVASENQLVAVGLTTRRNLCLLPAVKDSET 104
Query: 190 KENIDEECKLLLGD----------RNLGCPQFKNVHKVRGHPSLQKGGCHE----VHDIE 235
+E D +C+ L + CP ++N+ QKG + V+ +
Sbjct: 105 REEADSKCRSLTASWVREGITSRSSDSLCPYYENLQ--------QKGELFQIPPGVYSMS 156
Query: 236 DLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHN 294
L G+ C Y+ AR A ++ Y Y+++P I + ++ + +++ DEAHN
Sbjct: 157 SLNAFGEEQGICPYFTARRSLQYASIIVYNYHYLLDPKISRMISTELERDCVVVFDEAHN 216
Query: 295 IEDIARDAGSVDIDEDVLLKLQMELEQVCSV----NPMIYQPLIEMTQDLVGWIERRKAT 350
I+D+ + SV + +D + + L + + Q L+E Q ++ R
Sbjct: 217 IDDVCIETMSVHLKKDTIQRCYQNLNHLSGLVQDAKQRNAQQLLEEYQRVL----RGTPF 272
Query: 351 LAKREFQHFFSC-WTGDKALRELQEANISR-----QCFPILLECATKAIKEATDTESELP 404
LA E + D AL+E NI + + +LE ++ T+ +
Sbjct: 273 LATSETDALLAAPVLPDSALQETIPGNIRKAEHFLRFLRRILEYVQNVMQRNVATQEKTG 332
Query: 405 HLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQL----------ALQKYIKRDSKNPGGNW 454
L+ F +L + R S + Q+ L ++ P GN
Sbjct: 333 AFLQSMASLLQSDFKALKFSSDRLQSLIQTLQITHLLEFQPIQTLADFVTILGSYPTGNA 392
Query: 455 THT----------------LSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGV 498
L L CL+ ++ + V S+ILTSGT+SP+ +S L
Sbjct: 393 FVVIFEPYDERYPSIPDPLLQLACLDASLAMQPVFSRFRSVILTSGTISPIELYSRILMF 452
Query: 499 QFGTCLEAPHVIDVDLQ---VLTSVISTGPDNYPLNASYK-------------------- 535
T + + Q V +++ G D P+++ Y
Sbjct: 453 TPVTA----KSLTMSFQRRNVCPMIVTRGADQLPVSSKYDYRHDPSVVRNYGTLVMEMAR 508
Query: 536 -TADG-------YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFE--IVLKHYY 585
DG Y ME + W E G +++ K +F+E + ++ E + LK+Y
Sbjct: 509 IVPDGIVCFFTSYIYMETMIQLWHEMGIIKKISEYKLIFIE----TPDNLECTLALKNYR 564
Query: 586 NSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPN--- 642
+ G +GA F+ V RGK+ GI F
Sbjct: 565 KACDCG------------------------------RGALFMCVARGKVAEGIDFDRHYG 594
Query: 643 --INDIQVSLKKKYNDTYRSSKNLLSGN------EWYCNQAFRALNQAIGRCIRHRFDYG 694
+ + V + + R+ L N ++ A R Q IGR IR + DYG
Sbjct: 595 RCVIVLGVPFQYTESRVLRARLEFLRTNLQISEGDFLSFDAVRQAAQCIGRVIRSKTDYG 654
Query: 695 AIILLDERFQEERNRAHISKWL 716
++ D+RF + + KW+
Sbjct: 655 IMVFADKRFNRPDKKNKLPKWV 676
>gi|449701609|gb|EMD42397.1| DNA repair helicase rad3/xpD, putative [Entamoeba histolytica KU27]
Length = 770
Score = 96.3 bits (238), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 124/524 (23%), Positives = 215/524 (41%), Gaps = 118/524 (22%)
Query: 18 YHVGGIQVEFPYQ-PYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+ V GI++ FPYQ Y Q F+ V S + ++ H ++E TGTGK++S++ +
Sbjct: 14 FTVNGIEIHFPYQFIYPEQYQFIKTVTSGVTNNKKPPHKQIIIEMGTGTGKTVSIITAAK 73
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNK 136
L NQ +NISH+
Sbjct: 74 GL-----LDNQGSNISHT------------------------------------------ 86
Query: 137 NVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE 196
Y +RT +I Q+ +E K + +P VLASR H C VR+ ++ +
Sbjct: 87 ----------IYCTRTIDEIKQIFNELTKLS--IPSVVLASRAHLCLLDDVRESKHSQLK 134
Query: 197 CKLLLGDRNLG-CPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSM 255
C+ R+ G CP + H + + G I++LV G+ + C Y+ +R+
Sbjct: 135 CQ---EKRDKGLCPYY---HDIEDEIPIVAG-------IDELVQFGKQHQRCPYFCSRNN 181
Query: 256 ADDAQLVFCPYSYIINP----VIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDV 311
+ + C Y+YI++P V G M D+ +L+ DEAHN++++ DA ++ + D
Sbjct: 182 FYKSPFIVCTYNYILDPKVENVTVGKMS-DLHQTLLVFDEAHNVDNVVVDAQTLTLSLDT 240
Query: 312 LLKLQMELEQVCSVNPM--IYQPLIEMTQDLVGWIERRKATLAKREFQHF---------F 360
L + L ++ + + +PL + LV + + T E + F
Sbjct: 241 LELATISLVRLTKLLSIEESKKPLKNEYKRLVEGLRHSEPTKRIEEENNIPIDTTTSIQF 300
Query: 361 SCWTGDKA--LRE-LQEANISRQCFPILLECATKAIKEATD----TESELPHLSGMSVIT 413
D RE L+EA+I ++ + E + IK D + + P + + +
Sbjct: 301 VVLMNDIVNFFREKLREAHIHKK--QHINEHCSIPIKNIVDSFCNSLALTPEIVSLIPLR 358
Query: 414 LEGLFSSL------------TYFFSRNGSHVSDYQLAL------QKYIKRDSKNPGGNWT 455
L L +L F+ + V+D+ L Y+ K N
Sbjct: 359 LHLLIKALGDEYGGRQDVKGDSFYYDDLYLVADFAALLCSCQEGFSYVPDVVKMDKDNCF 418
Query: 456 HT-LSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGV 498
H+ L+L C++ A + + SII TSGTLSP+ ++ + LG+
Sbjct: 419 HSVLNLICVDAAHAIQPILNKFHSIIFTSGTLSPLKTYINILGL 462
Score = 52.4 bits (124), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 58/116 (50%), Gaps = 17/116 (14%)
Query: 622 KGASFLAVCRGKIVVGIPF-------------PNINDIQVSLKKKYNDTYRSSKNLLSGN 668
KGA V RG++ GI F P + +++K++ Y +K ++S +
Sbjct: 602 KGAILFCVTRGRLSEGINFTNHLARAVLIIGAPYLQSEILTIKERIE--YLDNKKIISKD 659
Query: 669 EWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNR--AHISKWLRKSIKQ 722
E+ A R NQ +GRCIR + DY I D+R++ N+ + + +W+ ++++
Sbjct: 660 EYLIFDAMRTCNQCVGRCIRGKNDYAVAIYADKRYKFNDNKIISSMPQWIVDALEK 715
>gi|154296465|ref|XP_001548663.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
Length = 764
Score = 96.3 bits (238), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 149/701 (21%), Positives = 268/701 (38%), Gaps = 159/701 (22%)
Query: 146 IFYASRTHSQISQVISEYKK-TAYRVPMAV---------LASRKHYCTNKYVRDKEN--- 192
+ Y SRT S+I + ++E K YR L SRK+ C + V+ +++
Sbjct: 41 LIYCSRTMSEIEKALAELKALMKYRAEQLGHQEDFRGLGLTSRKNLCLHPSVKREKSGAV 100
Query: 193 IDEECKLLLGDRNLGCPQFKNVHKVRGH--PSLQKGGCHE-----VHDIEDLVNVGQVVR 245
+D C+ L F K RG P+L H V ++ ++ G+ +
Sbjct: 101 VDARCRSLTAG-------FVKEKKERGEDVPNLDLLEPHNLIPNGVWTLDGIMRYGEEHK 153
Query: 246 GCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGS 304
C Y+ +R M ++ Y Y+++P I + ++ K I++ DEAHNI+++ ++ S
Sbjct: 154 QCPYFTSRRMMSFCNVIIYSYHYLLDPKIAERVSKELSKDCIVVFDEAHNIDNVCIESLS 213
Query: 305 VDIDEDVLLKL---QMELE-QVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFF 360
DI +D L + M LE ++ + + L + LV + R A A+ E
Sbjct: 214 TDITDDSLRRATRGAMNLESRISDLRDSDSEKLKDEYAKLVEGL--RGADEARAEDAFMS 271
Query: 361 SCWTGDKALRELQEANISR-QCFPILLECATKAIKE---------ATDTESELPHLSGMS 410
+ D L+E NI R + F + L+ + +K+ + S L HL +
Sbjct: 272 NPALPDDLLKEAVPGNIRRAEHFVVFLKRFIEYLKKTRMKVRQVISETPASFLAHLKEYT 331
Query: 411 VITLEGL------------------------FSSLTYFFSRNGSHVSDYQLALQKYIKRD 446
I + L + F + ++ + L L+ Y
Sbjct: 332 YIEKKPLRFCAERLTSLVRTLELTNIEDYQPLQEVATFATLVATYEKGFLLILEPYESDT 391
Query: 447 SKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEA 506
++ P L CL+ A+ K V E S+I+TSGT+SP+ + L +
Sbjct: 392 AEVP----NPVLHFTCLDAAIAIKPVFERFSSVIITSGTISPLEMYPKMLNFECVVQESY 447
Query: 507 PHVIDVDLQVLTSVISTGPDNYPLNASYK---------------------TADG------ 539
P + L +++ G D +++ ++ T DG
Sbjct: 448 PMTL-ARRSFLPMIVTRGSDQVAISSGFQVRNEPAVVRNYGNLLTEMSKLTPDGMVVFFP 506
Query: 540 -YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVR 598
Y ME + + W+ G + K + VE ++ + L+ Y + G
Sbjct: 507 SYLYMESIISMWQGMGILDEVWKYKLILVETPDA--QETSLALETYRTACCNG------- 557
Query: 599 KKRVKREGNNDLNTIESQENANKKGASFLAVCRGKI---------------VVGIPFPNI 643
+GA L V RGK+ +G+PF
Sbjct: 558 -----------------------RGAILLCVARGKVSEGIDFDHQYGRTVLCIGVPFQYT 594
Query: 644 NDIQVSLKKKY-NDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDER 702
+ + ++ +TYR + N++ A R Q +GR +R + DYG ++L D R
Sbjct: 595 ESRILKARLEFLRETYR-----IRENDFLSFDAMRHAAQCLGRVLRGKDDYGIMVLADRR 649
Query: 703 FQEERNRAHISKWLRKSIKQYD---SFDASLEGLKSFFRDV 740
F + R + KW+ ++I + S D ++ K F R++
Sbjct: 650 FL--KKRTQLPKWINQAILDSEVNLSTDMAVGSAKKFLRNM 688
>gi|347831219|emb|CCD46916.1| similar to DNA repair helicase RAD3 [Botryotinia fuckeliana]
Length = 770
Score = 96.3 bits (238), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 147/704 (20%), Positives = 269/704 (38%), Gaps = 159/704 (22%)
Query: 146 IFYASRTHSQISQVISEYKK-TAYRVPMAV---------LASRKHYCTNKYVRDKEN--- 192
+ Y SRT S+I + ++E K YR L SRK+ C + V+ +++
Sbjct: 41 LIYCSRTMSEIEKALAELKALMKYRAEQLGHQEDFRGLGLTSRKNLCLHPSVKREKSGAV 100
Query: 193 IDEECKLLL----------GDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQ 242
+D C+ L G+ C N+ + H + G V ++ ++ G+
Sbjct: 101 VDARCRSLTAGFVKEKKERGEDVPVCIYHDNLDLLEPHNLIPNG----VWTLDGIMRYGE 156
Query: 243 VVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARD 301
+ C Y+ +R M ++ Y Y+++P I + ++ K I++ DEAHNI+++ +
Sbjct: 157 EHKQCPYFTSRRMMSFCNVIIYSYHYLLDPKIAERVSKELSKDCIVVFDEAHNIDNVCIE 216
Query: 302 AGSVDIDEDVLLKL---QMELE-QVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQ 357
+ S DI +D L + M LE ++ + + L + LV + R A A+ E
Sbjct: 217 SLSTDITDDSLRRATRGAMNLESRISDLRDSDSEKLKDEYAKLVEGL--RGADEARAEDA 274
Query: 358 HFFSCWTGDKALRELQEANISR-QCFPILLECATKAIKE---------ATDTESELPHLS 407
+ D L+E NI R + F + L+ + +K+ + S L HL
Sbjct: 275 FMSNPALPDDLLKEAVPGNIRRAEHFVVFLKRFIEYLKKTRMKVRQVISETPASFLAHLK 334
Query: 408 GMSVITLEGL------------------------FSSLTYFFSRNGSHVSDYQLALQKYI 443
+ I + L + F + ++ + L L+ Y
Sbjct: 335 EYTYIEKKPLRFCAERLTSLVRTLELTNIEDYQPLQEVATFATLVATYEKGFLLILEPYE 394
Query: 444 KRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTC 503
++ P L CL+ A+ K V E S+I+TSGT+SP+ + L +
Sbjct: 395 SDTAEVPNP----VLHFTCLDAAIAIKPVFERFSSVIITSGTISPLEMYPKMLNFECVVQ 450
Query: 504 LEAPHVIDVDLQVLTSVISTGPDNYPLNASYK---------------------TADG--- 539
P + L +++ G D +++ ++ T DG
Sbjct: 451 ESYPMTL-ARRSFLPMIVTRGSDQVAISSGFQVRNEPAVVRNYGNLLTEMSKLTPDGMVV 509
Query: 540 ----YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCA 595
Y ME + + W+ G + K + VE ++ + L+ Y + G
Sbjct: 510 FFPSYLYMESIISMWQGMGILDEVWKYKLILVETPDA--QETSLALETYRTACCNG---- 563
Query: 596 VVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKI---------------VVGIPF 640
+GA L V RGK+ +G+PF
Sbjct: 564 --------------------------RGAILLCVARGKVSEGIDFDHQYGRTVLCIGVPF 597
Query: 641 PNINDIQVSLKKKY-NDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILL 699
+ + ++ +TYR + N++ A R Q +GR +R + DYG ++L
Sbjct: 598 QYTESRILKARLEFLRETYR-----IRENDFLSFDAMRHAAQCLGRVLRGKDDYGIMVLA 652
Query: 700 DERFQEERNRAHISKWLRKSIKQYD---SFDASLEGLKSFFRDV 740
D RF + R + KW+ ++I + S D ++ K F R++
Sbjct: 653 DRRFL--KKRTQLPKWINQAILDSEVNLSTDMAVGSAKKFLRNM 694
>gi|195564575|ref|XP_002105891.1| GD16432 [Drosophila simulans]
gi|194203255|gb|EDX16831.1| GD16432 [Drosophila simulans]
Length = 379
Score = 96.3 bits (238), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 93/180 (51%), Gaps = 25/180 (13%)
Query: 146 IFYASRTHSQISQVISEYKKTAY--RVPMAVLASRKHYCTNKYVRDKENI---DEEC--- 197
IF+ SRTHSQ++Q+++E +KT + V L SR+ C N VR +++ +E C
Sbjct: 190 IFFCSRTHSQLAQIVTELRKTPHGQSVRCISLGSRQQLCGNPAVRKLKHVGLMNERCLDM 249
Query: 198 ------------KLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVR 245
L + N CP FK V SL+ E DIE+L N G
Sbjct: 250 ATKKARPNPSKKSRLTAETNSRCP-FKAASLVE---SLRDLALTEPLDIEELANEGTACG 305
Query: 246 GCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIED-IARDAGS 304
GCSYYA+RS + AQL+ PY + R + + +KG+I+I+DEA N+ D +A+ GS
Sbjct: 306 GCSYYASRSAVEHAQLILLPYQLKLQKSARNQLGISLKGSIVIVDEARNLLDSVAQLHGS 365
Score = 50.8 bits (120), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 34/74 (45%), Gaps = 9/74 (12%)
Query: 5 ANPNPNYRKPLNAYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTG 64
A PN R A G FPY PY Q M + L+R Q + ESPTG
Sbjct: 2 AQYTPNQRLATPAAQEFG----FPYSPYEIQEQLMQELFEVLERGQV-----GIFESPTG 52
Query: 65 TGKSLSLLCSTLAW 78
TGKSL+L C L W
Sbjct: 53 TGKSLTLTCGALTW 66
>gi|67469709|ref|XP_650832.1| DNA repair helicase [Entamoeba histolytica HM-1:IMSS]
gi|56467489|gb|EAL45446.1| DNA repair helicase, putative [Entamoeba histolytica HM-1:IMSS]
Length = 770
Score = 96.3 bits (238), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 124/524 (23%), Positives = 215/524 (41%), Gaps = 118/524 (22%)
Query: 18 YHVGGIQVEFPYQ-PYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+ V GI++ FPYQ Y Q F+ V S + ++ H ++E TGTGK++S++ +
Sbjct: 14 FTVNGIEIHFPYQFIYPEQYQFIKTVTSGVTNNKKPPHKQIIIEMGTGTGKTVSIITAAK 73
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNK 136
L NQ +NISH+
Sbjct: 74 GL-----LDNQGSNISHT------------------------------------------ 86
Query: 137 NVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE 196
Y +RT +I Q+ +E K + +P VLASR H C VR+ ++ +
Sbjct: 87 ----------IYCTRTIDEIKQIFNELTKLS--IPSVVLASRAHLCLLDDVRESKHSQLK 134
Query: 197 CKLLLGDRNLG-CPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSM 255
C+ R+ G CP + H + + G I++LV G+ + C Y+ +R+
Sbjct: 135 CQ---EKRDKGLCPYY---HDIEDEIPIVAG-------IDELVQFGKQHQRCPYFCSRNN 181
Query: 256 ADDAQLVFCPYSYIINP----VIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDV 311
+ + C Y+YI++P V G M D+ +L+ DEAHN++++ DA ++ + D
Sbjct: 182 FYKSPFIVCTYNYILDPKVENVTVGKMS-DLHQTLLVFDEAHNVDNVVVDAQTLTLSLDT 240
Query: 312 LLKLQMELEQVCSVNPM--IYQPLIEMTQDLVGWIERRKATLAKREFQHF---------F 360
L + L ++ + + +PL + LV + + T E + F
Sbjct: 241 LELATISLVRLTKLLSIEESKKPLKNEYKRLVEGLRHSEPTKRIEEENNIPIDTTTSIQF 300
Query: 361 SCWTGDKA--LRE-LQEANISRQCFPILLECATKAIKEATD----TESELPHLSGMSVIT 413
D RE L+EA+I ++ + E + IK D + + P + + +
Sbjct: 301 VVLMNDIVNFFREKLREAHIHKKQH--INEHCSIPIKNIVDSFCNSLALTPEIVSLIPLR 358
Query: 414 LEGLFSSL------------TYFFSRNGSHVSDYQLAL------QKYIKRDSKNPGGNWT 455
L L +L F+ + V+D+ L Y+ K N
Sbjct: 359 LHLLIKALGDEYGGRQDVKGDSFYYDDLYLVADFAALLCSCQEGFSYVPDVVKMDKDNCF 418
Query: 456 HT-LSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGV 498
H+ L+L C++ A + + SII TSGTLSP+ ++ + LG+
Sbjct: 419 HSVLNLICVDAAHAIQPILNKFHSIIFTSGTLSPLKTYINILGL 462
Score = 52.4 bits (124), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 58/116 (50%), Gaps = 17/116 (14%)
Query: 622 KGASFLAVCRGKIVVGIPF-------------PNINDIQVSLKKKYNDTYRSSKNLLSGN 668
KGA V RG++ GI F P + +++K++ Y +K ++S +
Sbjct: 602 KGAILFCVTRGRLSEGINFTNHLARAVLIIGAPYLQSEILTIKERIE--YLDNKKIISKD 659
Query: 669 EWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNR--AHISKWLRKSIKQ 722
E+ A R NQ +GRCIR + DY I D+R++ N+ + + +W+ ++++
Sbjct: 660 EYLIFDAMRTCNQCVGRCIRGKNDYAVAIYADKRYKFNDNKIISSMPQWIVDALEK 715
>gi|375082618|ref|ZP_09729671.1| ERCC2/XPD/Rad3-related DNA repair helicase [Thermococcus litoralis
DSM 5473]
gi|374742696|gb|EHR79081.1| ERCC2/XPD/Rad3-related DNA repair helicase [Thermococcus litoralis
DSM 5473]
Length = 643
Score = 96.3 bits (238), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 161/659 (24%), Positives = 269/659 (40%), Gaps = 99/659 (15%)
Query: 101 VTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKKMTPTIFYASRTHSQISQVI 160
V + + NG + E+ P+ G+T V K M I Y +RTH Q+ +VI
Sbjct: 21 VDNAVRNGENLVIEA------PTGFGKTVSVLAGALPYAKDMGYKIIYLARTHKQMDRVI 74
Query: 161 SEYKKTAYR--VPMAVLASRKHYCTNKYVR----DKENIDEECKLLLGDRNLG-CPQFKN 213
E K + + V SRK C ++Y++ D N CK L + LG C F+N
Sbjct: 75 EELKAISKKTHVSGVEFRSRKELCLHQYIQNFAPDAYNAMIVCKNL---KKLGKCEFFEN 131
Query: 214 VHKVRGH-PSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINP 272
+ K + L + + ++ ++ C Y R +A ++ ++ Y Y+INP
Sbjct: 132 LKKKKEEFDELVQYFIQTPAEPITVLTYSKMFDFCPYELTRKVALNSDVIVASYLYMINP 191
Query: 273 VIR----GAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELE-----QVC 323
IR + D I+I DEAHN+ D A +A S + + + E + +
Sbjct: 192 AIRENFMSYFDFDYSDLIVIFDEAHNLPDQAINALSDKVSIHSINRAIKEADEYKEHETA 251
Query: 324 SVNPMIYQPLIEMTQDLVGWIERRKA-TLAKREFQHFFSCWTGDKALRELQEANISRQCF 382
+ + + L + Q+ + ++ + L + F H F ++ RQ
Sbjct: 252 NFLSIFLKGLENLYQEKLKDMKVEEVPILPESIFYHVFDVLGINE-----------RQLI 300
Query: 383 PIL--LECATKAIKEATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQ 440
IL + A AI+E E LP S + + G F L +F+ G DY +
Sbjct: 301 RILDQMVKAGDAIRE-DKIERNLPPRSYVGRV---GEF--LLLWFALIGKE--DYLFLM- 351
Query: 441 KYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQF 500
S++ G +L L L+P+ + + S I SGTL+P+ +F+ +GV+
Sbjct: 352 ------SRDKG----FSLELVALDPSKALSFIKNVQ-SAIFMSGTLTPLEAFADIMGVE- 399
Query: 501 GTCLEAPHVIDVD--LQVLTSVISTGPDNYPLNASYKTADGYKLMEKLCNRWRETGQWSR 558
G + P ++ + L ++ +ST D L +L +KL E ++
Sbjct: 400 GRLKKFPRMVKRENALVLVARDVSTRGDERSL----------ELYKKLARYVVEAAKFI- 448
Query: 559 LNAKKPLFVEPKGGSQEDFEIVLKHYYN-SISQGSKCAVVRKKRVKREGNNDLNTIESQE 617
P V S E E +L + I + + V +K+ NDL + +E
Sbjct: 449 -----PKNVGVFTASYEVLEGLLSANVDVRIREETGKKVFIEKKGASSKENDLLVMAFKE 503
Query: 618 NANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKKYNDTYRSSK 662
A K GA L V G+ ++VGIP+ +V + +Y + K
Sbjct: 504 EAKKDGAVLLGVMGGRNSEGQDYSGDEMNGVVLVGIPYARPTP-RVQAQIRYFENKFPGK 562
Query: 663 NLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIK 721
G Y A R L QA GR R + GAII+LD R + + + W+R+++K
Sbjct: 563 GRYYG---YILPAHRKLVQAAGRVHRSEEEKGAIIVLDYRLLWKSVQRDLPDWMRETLK 618
>gi|170591680|ref|XP_001900598.1| probable DNA helicase ERCC2/XPD - southern platyfish [Brugia
malayi]
gi|158592210|gb|EDP30812.1| probable DNA helicase ERCC2/XPD - southern platyfish, putative
[Brugia malayi]
Length = 763
Score = 96.3 bits (238), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 173/772 (22%), Positives = 307/772 (39%), Gaps = 154/772 (19%)
Query: 27 FPYQ-PYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNC-KL 84
FPY Y Q+++M + TLD GHC LLE P+GTGK++SLL +A+
Sbjct: 7 FPYDYIYPEQILYMSELKKTLDA---KGHC--LLEMPSGTGKTVSLLSLVIAYMLRFPDH 61
Query: 85 KNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKKMTP 144
++L S + P+ E + L N F Q PPS VA+
Sbjct: 62 LDKLVYCSRTIPEIEKCVEELRNL--FKYYEQCDGKPPSLFA----VAL----------- 104
Query: 145 TIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENI--DEECKLLLG 202
++R + I++ +S ++ + ++ T +VR K + D C
Sbjct: 105 ----SARKNLCINESVSSLRQGS------LVDGACQKLTASFVRAKRRLRPDLPC----- 149
Query: 203 DRNLGCPQFKNV--HKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQ 260
C F+ + K +P V+++++L +GQ C Y+ +R++ D A
Sbjct: 150 -----CAFFEKLDEQKDFNYPD-------GVYNLQNLRKLGQQKGICPYFLSRNVVDRAH 197
Query: 261 LVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMEL 319
+V Y YI++P I + + + + ++ DEAHNI+++ ++ SV + + + K +L
Sbjct: 198 IVVYSYHYILDPKIAELVSKNFSRHSCVVFDEAHNIDNVCIESMSVSLTKTTVEKATQKL 257
Query: 320 ----EQVCSVNP-------MIYQPLI--------EMTQD-------LVGWIERRKATLAK 353
E V + + Y L+ E T D L I +
Sbjct: 258 GILEEHVQRLREENSEQLRVEYDRLVEGLRRIEEERTNDQILANPVLPDMILKEAVPGTI 317
Query: 354 REFQHFFSCWTGDKALRELQEANISR-QCFPILLECATKAIKEATDTESELPHLSGMSVI 412
R HF S LR E R + +L+E +++ D L H+ +
Sbjct: 318 RNALHFIS------FLRRFNEYLKHRMRTKTVLIESPAAFLRDIND----LMHIDRRPLR 367
Query: 413 TLEGLFSSLT--------------YFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTL 458
F+SLT + + VS Y I+ + G + + TL
Sbjct: 368 FCAERFASLTRTLELADISDFSSLVLITNFATLVSTYARGFTIVIEPLDEKSGTSHSCTL 427
Query: 459 SLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLT 518
L C++ +V + + + ++++TSGTLSP++ + P ++D D ++
Sbjct: 428 HLSCMDASVAIRPIFQRYHTVVITSGTLSPLDMY--------------PKILDFDPAIMA 473
Query: 519 SVIST--GPDNYPLNASYKTADGYKL---MEKLCNRWRETGQWSRLNAKKPLFVEPKGGS 573
S+ T P PL S K + Y + +R+ + + L +E
Sbjct: 474 SLSMTLARPCIAPLIVS-KGSVAYAHSNDQVAMTSRFESREDAAVIRNYGSLVLELASLV 532
Query: 574 QEDFEIVLKHYY---NSIS----QGSKCAVVRKKRVKREGNNDLNTIESQENANK----- 621
+ + Y N IS QG +++ K + E + L T + E +
Sbjct: 533 PDGVVVFFTSYLYMENVISTWYDQGIIDELLKYKLLFIETTDALETSIALEKYVEACDCG 592
Query: 622 KGASFLAVCRGKIVVGIPFP-NINDIQVSLKKKYNDTYRSSKNL------------LSGN 668
+GA F +V RGK+ GI F ++ + L Y Y S+ L + N
Sbjct: 593 RGAIFFSVARGKVSEGIDFSHHLGRAVIMLGVPY--VYTESRILRARLEYLREQLGIREN 650
Query: 669 EWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSI 720
++ A R Q +GR +R + DYG ++ D+RF + + +W+++ I
Sbjct: 651 DFLTFDAMRQAAQCMGRALRGKSDYGLMVFADKRFSRKDKMGKLPRWIQEYI 702
>gi|358390776|gb|EHK40181.1| hypothetical protein TRIATDRAFT_296192 [Trichoderma atroviride IMI
206040]
Length = 871
Score = 95.9 bits (237), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 144/337 (42%), Gaps = 68/337 (20%)
Query: 458 LSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFG----TCLEAPHVIDVD 513
L+ L+P F + + ++IL GT+SP + +L T L HVI +
Sbjct: 538 LTYLLLSPTHAFSSIVSSARAVILAGGTMSPFQDYKDQLFPTLDSTKVTSLSCGHVIPRE 597
Query: 514 LQVLTSVISTGPDNYPLNASYK---------------------TADG-------YKLMEK 545
+ ++ S+ P + P S+K DG Y +++
Sbjct: 598 NLCVWTLASSHPGSPPFEFSFKQRGNRDMMNQLGLSILNVCNIVPDGVVVFFPSYSYLDE 657
Query: 546 LCNRWRE--TGQ----WSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRK 599
+ W++ +G W RL +K ++ + KG S +D VL+ Y I G++ A
Sbjct: 658 IIKIWQQPQSGNSHPIWDRLQLRKMVYRDTKGESSDD---VLRDYSQMI-LGARAA---- 709
Query: 600 KRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYNDTYR 659
R G L+ + + + + L C IV+G+P+PNI K +Y ++
Sbjct: 710 -GDTRTGALLLSVVGGKMSEGINFSDRLGRC--VIVIGLPYPNIASPDWKAKIEYIESTT 766
Query: 660 SSKNLLSGN--------------EWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQE 705
+ + G ++Y N RA+NQ+IGR IRHR DY AIIL+D R+
Sbjct: 767 EERLIKEGQSKSEATAQAKQAARDFYENACMRAVNQSIGRAIRHRGDYAAIILVDRRYGT 826
Query: 706 ERNRAHISKWLRKSIKQYDSFD----ASLEGLKSFFR 738
R R + W+R +++ DS + A + L FFR
Sbjct: 827 GRIRGKLPGWIRDGLEK-DSHEKGISALMGALGGFFR 862
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 94/190 (49%), Gaps = 24/190 (12%)
Query: 130 QVAMNNKNVKKKMTPTIFYASRTHSQISQVISEYKKTAY--RVPMAV------------- 174
QV + + V++K+ I+Y SRTHSQ+SQ I+E ++ + +P +V
Sbjct: 192 QVDSDEEIVEEKIK--IYYTSRTHSQLSQFITELRRPVFPSSLPTSVAKGSDIPSTEPVK 249
Query: 175 ---LASRKHYCTNKYVR---DKENIDEECKLLLGDRNLGCPQFKNVHKVRGHP-SLQKGG 227
L+SR+ C N V + I++ C L R+ F ++ +
Sbjct: 250 LLPLSSRQKLCINPSVARLGSVQAINDRCTELQQARSSTKCSFAPKEELLSQTHQFRDST 309
Query: 228 CHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAIL 287
+ DIEDL +G+ + C YYA+R + A+++ PY ++ R A+ + ++G ++
Sbjct: 310 LATLPDIEDLHQLGKSLSVCPYYASRGVLPGAEIITLPYPLLLQQSAREALGIKLEGNVV 369
Query: 288 ILDEAHNIED 297
I+DEAHNI D
Sbjct: 370 IIDEAHNILD 379
Score = 53.9 bits (128), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 17 AYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
A+ + + P+ PY Q FM V L + G +LESPTGTGKSLSL+C++L
Sbjct: 10 AHELSNLDFHHPFTPYTVQNQFMRTVYQILQTGE--GQV-GILESPTGTGKSLSLICASL 66
Query: 77 AWQQNCKLKNQ 87
W +N K Q
Sbjct: 67 TWLRNHKATEQ 77
>gi|307186827|gb|EFN72247.1| Probable ATP-dependent RNA helicase DDX12 [Camponotus floridanus]
Length = 861
Score = 95.5 bits (236), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 142/315 (45%), Gaps = 55/315 (17%)
Query: 458 LSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGT------CLEAPHVID 511
+ LNPA F D+ + S++L GT+ PM+ F +L + G HVI
Sbjct: 559 IKFLLLNPATHFHDIVRDARSVVLAGGTMEPMSEFIDQLFLMAGAMPDRIMTFSCDHVIP 618
Query: 512 VDLQVLTSVISTGPDNYPLNASYKTADGYKLMEKL-------CN---------------- 548
+ ++++V+ GP ++ KL+++L CN
Sbjct: 619 KE-NIISNVVIRGPTGIEFEFNFHNRQDTKLLDELGRVLLNLCNIVPAGIVAFFPSYSYE 677
Query: 549 -----RWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVK 603
++G S+++ KK ++ EPK SQ + ++L Y N ++ +
Sbjct: 678 DIVFKHLDKSGIASKISIKKRIYREPKLASQVN--VILDQYAN---------FIKNPQPP 726
Query: 604 REGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYNDTYRSSKN 663
G+ + + + + + L C IVVG+P+ NI ++ K KY + + S
Sbjct: 727 CNGSLLFSVVGGKLSEGLNFSDDLGRCI--IVVGLPYSNIKSPELQEKMKYLNEHVKSD- 783
Query: 664 LLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHI-SKWLRKSIKQ 722
+G+ +Y N +A+NQ IGR +RH DY ++LLD+R+ R++ + +W+++S+
Sbjct: 784 --AGSNFYENSCMKAVNQCIGRSVRHINDYSTVVLLDKRY---RHKVKVLPQWIQRSVTV 838
Query: 723 YDSFDASLEGLKSFF 737
DSF + + FF
Sbjct: 839 NDSFGPVIGNIAKFF 853
Score = 92.0 bits (227), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 103/211 (48%), Gaps = 31/211 (14%)
Query: 146 IFYASRTHSQISQVISEYKKTAYRVPMAV--LASRKHYCTNKYVRDKENID---EECKLL 200
IF+ SRTHSQ++Q + E K++ Y ++V L+SR++YC NK V+ ++I+ E C L
Sbjct: 196 IFFCSRTHSQLTQFVHELKRSPYSQDISVVPLSSRQNYCINKSVKRLKHINLINETCLQL 255
Query: 201 LGDRNL--------------GCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRG 246
+ GCP K+ L + DIE++ GQ
Sbjct: 256 QRKKTTVKKEKDLKKLKTSSGCPFVPGDQKL-----LMAEVLTNIKDIEEIAQKGQENDT 310
Query: 247 CSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIED-IARDAGSV 305
C YY +R QL+ PY+ I++ R ++ +D+KG +LI+DEAHN+ D I SV
Sbjct: 311 CPYYGSRKSLQSGQLILVPYNSILHKSTRDSLGIDLKGNVLIIDEAHNLLDAIEGMHSSV 370
Query: 306 DIDEDV------LLKLQMELEQVCSVNPMIY 330
++ LL+ Q E + S ++Y
Sbjct: 371 ITGRNLLHCYSQLLQYQKRFESLFSAKSVLY 401
Score = 40.0 bits (92), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 16/22 (72%), Positives = 17/22 (77%)
Query: 57 ALLESPTGTGKSLSLLCSTLAW 78
L ESPTGTGKSLSL+C L W
Sbjct: 34 GLFESPTGTGKSLSLICGALKW 55
>gi|403412410|emb|CCL99110.1| predicted protein [Fibroporia radiculosa]
Length = 759
Score = 95.5 bits (236), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 148/703 (21%), Positives = 274/703 (38%), Gaps = 146/703 (20%)
Query: 146 IFYASRTHSQISQVISEYKK-TAYRVPMAV---------------LASRKHYCTNKYVRD 189
+ Y SRT +I + + E K+ YR+ A L SRK+ C + V
Sbjct: 28 LIYCSRTVPEIEKALEELKRLMVYRLSSAETEEEKEKERSFYGLGLTSRKNLCIHPEVSK 87
Query: 190 KEN---IDEECKLLL-------GDRNLG----CPQFKNVHKVRGHPSLQKGGCHEVHDIE 235
++ +D C+ L G +N G C +N+ K+ + G + +
Sbjct: 88 EKKGKVVDARCRDLTNSAVCEKGRQNPGSVDLCDWHENLGKLDPGSLIPPG----IWTLA 143
Query: 236 DLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHN 294
D++ G+ C Y+ R M ++ + Y+++P + + ++ K AI++ DEAHN
Sbjct: 144 DVLQYGRDNTICPYFLVRRMMPFVDIIIYSFHYLLDPKVAEQVSKEMSKDAIVVFDEAHN 203
Query: 295 IEDI-----------------ARDAGSV-----DIDEDVLLKLQMEL------------- 319
I+++ AR G + +I + KLQ E
Sbjct: 204 IDNVCIESLSIDLSRPMLESAARSVGKLGDRIEEIKKTDASKLQDEYAKLVEGLQEAAND 263
Query: 320 EQVCSVNPMIYQPL--------IEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRE 371
E NP++ + L I + V +++R L R T L+
Sbjct: 264 EDAFMSNPVLPEDLLKEAIPGNIRKAEHFVAFLKRFVEYLKTRMRVLHVVAETPLSFLQH 323
Query: 372 LQEAN-ISRQCFPILLECATKAIKEATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGS 430
L++ I R+ P+ CA + ++ +L L + + F++L + +
Sbjct: 324 LKDITYIERR--PLRF-CAERL--QSLVRTLDLSRLDEYASLQKVASFATLVATYEKGAI 378
Query: 431 HVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMN 490
HV + L L+ + ++ P L CL+PA+ K V E ++++TSGT+SP++
Sbjct: 379 HVG-FLLILEPFETDNATVPNP----IFHLTCLDPAIAIKPVFERFSTVVITSGTISPLD 433
Query: 491 SFSSELGVQFGTCLEAPHVIDVDLQ-VLTSVISTGPDNYPLNASYKT------------- 536
+ L QF ++ + + + L VI+ G D +++ ++
Sbjct: 434 MYPKML--QFTPVVQETYAMTLTRNSFLPLVITRGSDQVAISSRFEVRNDPAVVRNFGSI 491
Query: 537 --------ADG-------YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVL 581
DG Y ME + W + G + + K +FVE ++ I L
Sbjct: 492 LIEYSKIVPDGIVAFFPSYLYMESIVAAWNDMGILNEVWKHKLIFVETPDANET--SIAL 549
Query: 582 KHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFP 641
++Y + G ++ R K D + + G R I+ G+P+
Sbjct: 550 ENYRRACDNGRGAVLLSVARGKVSEGIDFD--------HNYG-------RAVIMFGVPYQ 594
Query: 642 NINDIQVSLKKKY-NDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLD 700
+ + +Y D YR + +E+ A R Q +GR +R + D+G ++ D
Sbjct: 595 YTESRILKARLEYLRDAYR-----IRESEFLGFDAMRNAAQCVGRVLRGKTDWGLMVFAD 649
Query: 701 ERFQEERNRAHISKWLRKSIKQYD---SFDASLEGLKSFFRDV 740
+RF RA + +W+ + I + S D +L K F R +
Sbjct: 650 KRFARADKRAKLPRWINQYITETASNLSTDMALTLSKLFMRTI 692
>gi|157123196|ref|XP_001660054.1| regulator of telomere elongation helicase 1 rtel1 [Aedes aegypti]
gi|108874458|gb|EAT38683.1| AAEL009438-PA [Aedes aegypti]
Length = 873
Score = 95.5 bits (236), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 138/326 (42%), Gaps = 60/326 (18%)
Query: 457 TLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEA------PHVI 510
T+ LNP F+++ SIIL GT+ P+ + +L F TC E HV+
Sbjct: 572 TMKYLLLNPGARFQEILSSCRSIILAGGTMQPVEELTEQL---FKTCPERVQIRSYRHVV 628
Query: 511 DVDLQVLTSVISTGPDNYPLNASYKTADGYKLMEKLCNRWRETGQWSRLNAKKPLFVEPK 570
D VL I+ GP L +Y L+ +L + Q V P
Sbjct: 629 PAD-AVLPLAIAKGPSGKELLFNYGNRQNKDLLNELSSVLANLCQ-----------VVPH 676
Query: 571 G----GSQEDFEIVLKHYYNSISQGSKCAVVR-KKRVKREGNN---------DLNTIESQ 616
G S D+ L +Y + Q + A + +KRV RE D + Q
Sbjct: 677 GVVVFFSSYDY---LDQFYRHLQQTDRLAKLEERKRVFREPRGSAQVDKILADYSKAARQ 733
Query: 617 ENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKKYNDTYRSS 661
++ GA L+V GK +VVG+P+PN ++ + +Y D
Sbjct: 734 WTGSQTGALMLSVVGGKLSEGLNFSDELGRCVVVVGLPYPNRTSPELVERMRYLDRTLQP 793
Query: 662 KNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERF-QEERNRAHISKWLRKSI 720
+GNE+Y N +A+NQ IGR +RH DY +++LLD R+ E+ R + W+ + +
Sbjct: 794 P---AGNEYYENLCMKAVNQCIGRAVRHIKDYASVVLLDVRYGSSEKIRKKLPVWISEGM 850
Query: 721 KQYDSFDASLEGLKSFFRDVKGWVGK 746
+ + + + L FF KG GK
Sbjct: 851 QCVERYGQAHGSLVRFF---KGRSGK 873
Score = 90.1 bits (222), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 99/193 (51%), Gaps = 19/193 (9%)
Query: 146 IFYASRTHSQISQVISEYKKTAY--RVPMAVLASRKHYCTNKYVRDKEN---IDEEC--- 197
+ + SRTHSQ+ QV+ E ++T + ++ + +ASR+++C N VR + I+E C
Sbjct: 201 VIFCSRTHSQLGQVVEEVRRTEFGKQIRLTTIASRQNFCINPEVRRLRSNPLINERCLEL 260
Query: 198 -----KLLLGDRNLGCPQFKNV------HKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRG 246
K + D + + + + + + L+ EV DIE+LV + +
Sbjct: 261 QKKSGKATVVDEDQNARKKRKISQKCSFYNRQAIEDLKNDSLFEVQDIEELVTFAKQEKA 320
Query: 247 CSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVD 306
C YYA+R+ D+QL+ PY +++ R +DI A++I+DEAHN+ D S +
Sbjct: 321 CPYYASRAAIPDSQLLMIPYQNLLHRRTREQTGIDISNAVIIIDEAHNLLDTISSIHSQE 380
Query: 307 IDEDVLLKLQMEL 319
+ + L + ++ L
Sbjct: 381 VTLEQLQQARLHL 393
Score = 46.6 bits (109), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 6/58 (10%)
Query: 22 GIQVEFPYQ-PYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
G +FP+ PY QL M + ST++ Q + ESPTGTGKSL+L C L+W
Sbjct: 14 GDGFQFPFATPYSIQLDLMRSLYSTVENRQ-----VGIFESPTGTGKSLTLTCGVLSW 66
>gi|365983344|ref|XP_003668505.1| hypothetical protein NDAI_0B02270 [Naumovozyma dairenensis CBS 421]
gi|343767272|emb|CCD23262.1| hypothetical protein NDAI_0B02270 [Naumovozyma dairenensis CBS 421]
Length = 771
Score = 95.5 bits (236), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 160/720 (22%), Positives = 279/720 (38%), Gaps = 193/720 (26%)
Query: 146 IFYASRTHSQISQVISEYKK-TAYRVPMAV---------LASRKHYCTNKYV---RDKEN 192
I Y SRT S+I + + E + AYR L SRK+ C + V R
Sbjct: 69 IIYCSRTMSEIEKALVELENLMAYRAKELGHVETFRGLGLTSRKNLCLHPVVSKERKGSV 128
Query: 193 IDEECKLL---LGDRNLG---------CPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNV 240
+DE+C+ + + R L C +N++K+ L G V E L+
Sbjct: 129 VDEKCRRMTNGIAKRKLEQDPNADAELCEYHENLYKMEVDEYLPNG----VFSFEKLIKY 184
Query: 241 GQVVRGCSYYAARSMADDAQLVFCPYSYIINPVI--RGAMEVDIKGAILILDEAHNIE-- 296
+ C Y+ R M ++ Y Y+++P I R + EV K +I+I DEAHNI+
Sbjct: 185 CEERTICPYFVVRRMISMCNIMIYSYHYLLDPKIAERVSNEVS-KDSIVIFDEAHNIDNV 243
Query: 297 -----------DIARDA--GSVDIDEDV-------LLKLQMELEQVCS------VNPMIY 330
D+ R A G+ ++E + +LQ E +++ + P
Sbjct: 244 CIESLSLDLTNDVLRRATKGAHALEEKIDDVRKIDSQRLQDEYDKLVEGLHSSDIVPEQE 303
Query: 331 QPLIE---MTQDLVGWIERRKATLAK-REFQHFFSCWTGDKALRELQEANISRQCFPILL 386
+P +E +++DL+ ++A R +HF S L+ L E L
Sbjct: 304 EPFVETPVLSKDLL-----KEAIPGNIRRAEHFVSF------LKRLIE----------YL 342
Query: 387 ECATKAIKEATDT-ESELPHLSGMSVITLEGL---------------------FSSL--- 421
+ K + ++T +S L HL ++ I + L F+SL
Sbjct: 343 KTRMKVLHVISETPKSFLQHLKQLTFIDRKPLRFCSERLSLLVRTLEVNDVEDFNSLKDI 402
Query: 422 TYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIIL 481
F + ++ + L ++ Y ++ P T CL+ ++ K V E S+I+
Sbjct: 403 ATFATLISTYEDGFLLIIEPYEIENAAVPNPIMRFT----CLDASIAIKPVFEKFSSVII 458
Query: 482 TSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQ-VLTSVISTGPDNYPLNASYK----- 535
TSGT+SP++ + L F T L+ + + + + L +++ G D +++ ++
Sbjct: 459 TSGTISPLDMYPRMLN--FETVLQKSYSMTLAKKSFLPMIVTKGSDQVAISSRFEIRNDP 516
Query: 536 ----------------TADG-------YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGG 572
T DG Y ME + + W+ G + K + VE
Sbjct: 517 SIVRNYGSMLVEFAKITPDGMVVFFPSYLYMESIVSMWQTMGILDEVWKHKLILVETPDA 576
Query: 573 SQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRG 632
+ + L+ Y + S G +GA L+V RG
Sbjct: 577 QETS--LALETYRKACSNG------------------------------RGAILLSVARG 604
Query: 633 KIVVGIPFPN---INDIQVSLKKKYNDTYRSSKNL--------LSGNEWYCNQAFRALNQ 681
K+ GI F + + + + +Y ++ L + N++ A R Q
Sbjct: 605 KVSEGIDFDHQYGRTVLMIGIPFQYTESRILKARLEFLRENYQIRENDFLSFDAMRHAAQ 664
Query: 682 AIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYD---SFDASLEGLKSFFR 738
+GR +R + DYG ++L D RF R R + KW+ + + D S D ++ K F R
Sbjct: 665 CLGRVLRGKDDYGVMVLADRRFS--RKRTQLPKWIAQGLSDADLNLSTDMAISNAKQFLR 722
Score = 68.9 bits (167), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 128/298 (42%), Gaps = 46/298 (15%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+++ + V FPY + Y Q +MC + TLD +++LE P+GTGK++SLL T+
Sbjct: 3 FYIDDLPVLFPYPKIYPEQYHYMCDLKKTLD-----AGGNSILEMPSGTGKTVSLLSLTI 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNK 136
++Q + ++ S + + E L N + + G T
Sbjct: 58 SYQMHYPEHRKIIYCSRTMSEIEKALVELENLMAYRAKELGHVETFRGLGLT-------- 109
Query: 137 NVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE 196
SR + + V+S+ +K +V+ + TN + K D
Sbjct: 110 -------------SRKNLCLHPVVSKERKG------SVVDEKCRRMTNGIAKRKLEQDPN 150
Query: 197 CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMA 256
D L C +N++K+ L G V E L+ + C Y+ R M
Sbjct: 151 -----ADAEL-CEYHENLYKMEVDEYLPNG----VFSFEKLIKYCEERTICPYFVVRRMI 200
Query: 257 DDAQLVFCPYSYIINPVI--RGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVL 312
++ Y Y+++P I R + EV K +I+I DEAHNI+++ ++ S+D+ DVL
Sbjct: 201 SMCNIMIYSYHYLLDPKIAERVSNEVS-KDSIVIFDEAHNIDNVCIESLSLDLTNDVL 257
>gi|348537926|ref|XP_003456443.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit-like [Oreochromis niloticus]
Length = 760
Score = 95.5 bits (236), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 147/667 (22%), Positives = 270/667 (40%), Gaps = 127/667 (19%)
Query: 146 IFYASRTHSQISQVISEYKKT----------AYRVPMAVLASRKHYCTNKYV---RDKEN 192
+ Y SRT +I +V+ E +K + L+SRK+ C + V R +
Sbjct: 70 LIYCSRTVPEIEKVVEELRKLMEFYTKETGESNNFLALALSSRKNLCIHPEVSSLRFGKE 129
Query: 193 IDEECKLLLG---------DRNLG-CPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQ 242
+D +C L + NL C ++ V L G +++++DL G+
Sbjct: 130 VDGKCHSLTASYIRAQHHSNPNLPVCRFYEEFDSVGRQVPLPAG----IYNLDDLKAFGR 185
Query: 243 VVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARD 301
C YY AR A +V Y Y+++P I + ++ K ++++ DEAHNI+++ D
Sbjct: 186 RKGWCPYYLARYSILHANIVVYSYHYLLDPKIADLVSKELAKKSVVVFDEAHNIDNVCID 245
Query: 302 AGSVD----------------------IDEDVLLKLQMELEQVCS--------------- 324
+ SV+ I E KL+ E ++
Sbjct: 246 SMSVNITRRTLDRCQNNVDTLQNTIHKIKETDAAKLREEYRRLVEGLKEANVARETDIYL 305
Query: 325 VNPMIYQPL--------IEMTQDLVGWIERRKATLAKR-EFQHFFSCWTGDKALREL-QE 374
NP++ + I + VG++ R L R QH + + L+++ +
Sbjct: 306 ANPVLPDEILQEAVPGSIRTAEHFVGFMRRFLEYLKSRLRVQHVVQ-ESAPQFLKDIFDK 364
Query: 375 ANISRQCFPILLECATKAIKEATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSD 434
I R+ P+ CA + ++ E+ ++ S +TL F++L +S+
Sbjct: 365 VCIDRK--PLRF-CAERL--QSLLRTLEIADIADFSAVTLISNFATLVSTYSQG------ 413
Query: 435 YQLALQKYIKRDS--KNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSF 492
+ + ++ + R NP L C++P++ K V + S+++TSGTLSP++ +
Sbjct: 414 FTIIIEPFEDRTPTIANP------VLHFSCMDPSIAIKPVFQRFQSVVITSGTLSPLDIY 467
Query: 493 SSELGVQFGTCLEAPHVIDVDLQVLTS-VISTGPDNYPLNASYKTADGYKLMEKLCNRWR 551
L F A + + L ++ G D L++ ++T + + ++ N
Sbjct: 468 PRIL--DFRPVTMASFTMTLARTCLCPLIVGRGNDQVALSSKFETREDFAVIRNYGNLLL 525
Query: 552 ETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLN 611
E ++A P + S E ++ +Y QG + R K + E +
Sbjct: 526 E------MSAIVPDGIVAFFTSYVYMENIVASWYE---QGILENIQRNKLIFIETQDAAE 576
Query: 612 T---IESQENA--NKKGASFLAVCRGKIVVGIPF-------------PNINDIQVSLKKK 653
T +E + A N +GA L+V RGK+ GI F P + LK +
Sbjct: 577 TSMALEKYQEACENGRGAILLSVARGKVSEGIDFVHHYGRAVLMFGVPYVYTQSRILKAR 636
Query: 654 YNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHIS 713
Y + + N++ A R Q +GR IR + DYG +I D+R+ R +
Sbjct: 637 LE--YLRDQFQIRENDFLTFDAMRHAAQCVGRAIRGKTDYGLMIFADKRYARADKRGKLP 694
Query: 714 KWLRKSI 720
+W+++ I
Sbjct: 695 RWIQEHI 701
Score = 72.8 bits (177), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 130/300 (43%), Gaps = 47/300 (15%)
Query: 20 VGGIQVEFPYQ-PYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
+ G+ V FPY Y Q +M + TLD H +LE P+GTGK++SLL +A+
Sbjct: 5 IEGLLVYFPYDYIYPEQYSYMLELKRTLD-----AKGHGVLEMPSGTGKTISLLSLIVAY 59
Query: 79 QQNCKLK-NQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKN 137
Q+ L+ +L S + P+ E V + L F + +N A + KN
Sbjct: 60 QRAFPLEVTKLIYCSRTVPEIEKVVEELRKLMEFYTKET-----GESNNFLALALSSRKN 114
Query: 138 VKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEEC 197
+ H ++S + + K + + H T Y+R + + +
Sbjct: 115 LC------------IHPEVSSL--RFGKE--------VDGKCHSLTASYIRAQHHSNPNL 152
Query: 198 KLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMAD 257
+ C ++ V L G +++++DL G+ C YY AR
Sbjct: 153 PV--------CRFYEEFDSVGRQVPLPAG----IYNLDDLKAFGRRKGWCPYYLARYSIL 200
Query: 258 DAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQ 316
A +V Y Y+++P I + ++ K ++++ DEAHNI+++ D+ SV+I L + Q
Sbjct: 201 HANIVVYSYHYLLDPKIADLVSKELAKKSVVVFDEAHNIDNVCIDSMSVNITRRTLDRCQ 260
>gi|432891078|ref|XP_004075537.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit-like [Oryzias latipes]
Length = 665
Score = 95.5 bits (236), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 156/692 (22%), Positives = 275/692 (39%), Gaps = 154/692 (22%)
Query: 19 HVGGIQVEFPYQ-PYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLA 77
++ G+ V FPY Y Q +M + TLD H +LE P+GTGK++SLL +A
Sbjct: 4 NIEGLLVYFPYDYIYPEQYSYMLELKRTLD-----AKGHGVLEMPSGTGKTISLLSLIVA 58
Query: 78 WQQNCKLK-NQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNK 136
+Q+ L +L S + P+ E V + L
Sbjct: 59 YQKAFPLDVTKLIYCSRTVPEIEKVVEEL------------------------------- 87
Query: 137 NVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYV---RDKENI 193
+K M FYA T +++ ++ L+SRK+ C + V R + +
Sbjct: 88 --RKLME---FYAKET-GEVNNFLA-----------LALSSRKNLCIHPEVSSLRFGKEV 130
Query: 194 DEECKLLLGDRNLG----------CPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQV 243
D +C L C ++ V L G +++++DL + G+
Sbjct: 131 DGKCHSLTASYIRAQRHSNPDQPVCRFYEEFDAVGRQVPLPAG----IYNLDDLKDFGRR 186
Query: 244 VRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDA 302
C YY AR A +V Y Y+++P I + ++ K ++++ DEAHNI+++ D+
Sbjct: 187 KGWCPYYLARYSILHANIVVYSYHYLLDPKIADLVSKELAKKSVVVFDEAHNIDNVCIDS 246
Query: 303 GSVDIDEDVLLK----LQMELEQ----------------------------------VCS 324
SV+I L + +Q EL++ V
Sbjct: 247 MSVNITRRTLDRRFCLIQTELKRKILKIKDTDAAKLREEYRRLVEGLKEANVARETDVYL 306
Query: 325 VNPMIYQPL--------IEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRELQE-A 375
NP++ + I + +G++ R L R H + + L+++ E
Sbjct: 307 ANPVLPDEILQEAVPGSIRTAEHFLGFLRRFLEYLKSRLRVHHVVQESAPQFLKDIFEKV 366
Query: 376 NISRQCFPILLECATKAIKEATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDY 435
I R+ P+ CA + ++ E+ ++ S +TL F++L VS Y
Sbjct: 367 CIDRK--PLRF-CAERL--QSLLRTLEIADIADFSAVTLISNFATL----------VSTY 411
Query: 436 QLALQKYIK-RDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSS 494
L I+ D + P L C++P++ K V + S+++TSGTLSP++ +
Sbjct: 412 SLGFTIIIEPFDDRTPTIA-NPVLHFSCMDPSIAIKPVFQRFQSVVITSGTLSPLDIYPK 470
Query: 495 ELGVQFGTCLEAPHVIDVDLQVLTS-VISTGPDNYPLNASYKTADGYKLMEKLCNRWRET 553
L F A + + L ++ G D L++ ++T + + ++ N E
Sbjct: 471 IL--DFRPVTMASFTMTLARTCLCPLIVGRGNDQVALSSKFETREDFAVIRNYGNLLLE- 527
Query: 554 GQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNT- 612
++A P + S E ++ +Y QG + R K + E + T
Sbjct: 528 -----MSAIVPDGIVAFFTSYVYMENIVASWYE---QGILENIQRNKLIFIETQDAAETS 579
Query: 613 --IESQENA--NKKGASFLAVCRGKIVVGIPF 640
+E + A N +GA L+V RGK+ GI F
Sbjct: 580 MALEKYQEACENGRGAILLSVARGKVSEGIDF 611
>gi|604371|gb|AAA85822.1| ERCC2/XPD [Xiphophorus maculatus]
Length = 760
Score = 95.5 bits (236), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 152/695 (21%), Positives = 263/695 (37%), Gaps = 183/695 (26%)
Query: 146 IFYASRTHSQISQVISEYKKTAYRVP---------MAV-LASRKHYCTNKYV---RDKEN 192
+ Y SRT +I +V+ E +K +A+ L+SRK+ C + V R +
Sbjct: 70 LIYCSRTVPEIEKVVEELRKLMEFYAKETGEVNNFLALSLSSRKNLCIHPEVSSLRFGKE 129
Query: 193 IDEECKLLLGDRNLG----------CPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQ 242
+D +C L C ++ V L G +++++DL + G+
Sbjct: 130 VDGKCHSLTASYIRAQRHSNPNQPVCRFYEEFDAVGRQVPLPAG----IYNLDDLKDFGR 185
Query: 243 VVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARD 301
C YY AR A +V Y Y+++P I + ++ K ++++ DEAHNI+++ D
Sbjct: 186 RKGWCPYYLARYSILHANIVVYSYHYLLDPKIADLVSKELAKKSVVVFDEAHNIDNVCID 245
Query: 302 AGSVD----------------------IDEDVLLKLQMELEQVCS--------------- 324
+ SV+ I E KL+ E ++
Sbjct: 246 SMSVNITRRTVDRCQNNVDTLQNTIHKIKETDAAKLREEYRRLVEGLKEANVARETDIYL 305
Query: 325 VNPMIYQPL--------IEMTQDLVGWIERRKATL-AKREFQHFFSCWTGDKALREL-QE 374
NP++ + I + VG++ R L A+ QH + + L+++ +
Sbjct: 306 ANPVLPDEVLQEAVPGSIRTAEHFVGFLRRFLEYLKARLRVQHVVQ-ESAPQFLKDIFDK 364
Query: 375 ANISRQCFPIL---LECATKAIKEATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSH 431
I R+ L+C + + E+ ++ S +TL F++L +S+
Sbjct: 365 VCIDRKPLRFCAERLQCLLRTL--------EIADIADFSAVTLISNFATLVSTYSQG--- 413
Query: 432 VSDYQLALQKYIKRDS--KNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSP- 488
+ + ++ + R NP L C++P++ K V + S+I+TSGTLSP
Sbjct: 414 ---FTIIIEPFEDRTPTIANP------VLHFSCMDPSIAIKPVFQRFQSVIITSGTLSPL 464
Query: 489 -------------MNSFSSELGVQFGTCLEAPHVIDV--DLQVLTSVISTGPD------- 526
M SF+ L TCL P ++ D L+S T D
Sbjct: 465 DIYPRILDFRPVTMASFTMTLA---RTCL-CPLIVGRGNDQVALSSKFETREDFAVIRNY 520
Query: 527 -NYPLNASYKTADG-------YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFE 578
N L S DG Y ME + W E G + K +F+E + ++
Sbjct: 521 GNLLLEMSAVVPDGIVAFFTSYVYMENIVASWYEQGILENIQKNKLIFIETQDAAETS-- 578
Query: 579 IVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGI 638
+ L+ Y + G +GA L+V RGK+ GI
Sbjct: 579 MALEKYQEACENG------------------------------RGAILLSVARGKVSEGI 608
Query: 639 PF-------------PNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGR 685
F P + LK + Y + + N++ A R Q +GR
Sbjct: 609 DFVHHFGRAVIMFGVPYVYTQSRILKARLE--YLRDQFQIRENDFLTFDAMRHAAQCLGR 666
Query: 686 CIRHRFDYGAIILLDERFQEERNRAHISKWLRKSI 720
IR + DYG +I D+R+ R + +W+++ I
Sbjct: 667 AIRGKTDYGLMIFADKRYARSDKRGKLPRWIQEHI 701
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 128/304 (42%), Gaps = 73/304 (24%)
Query: 20 VGGIQVEFPYQ-PYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
+ G+ V FPY Y Q +M + TLD H +LE P+GTGK++SLL +A+
Sbjct: 5 IEGLLVYFPYDYIYPEQYSYMLELKRTLD-----AKGHGVLEMPSGTGKTISLLSLIVAY 59
Query: 79 QQNCKLK-NQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKN 137
Q+ L +L S + P+ E V + L
Sbjct: 60 QRAFPLDVTKLIYCSRTVPEIEKVVEEL-------------------------------- 87
Query: 138 VKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYV---RDKENID 194
+K M FYA T +++ ++ L+SRK+ C + V R + +D
Sbjct: 88 -RKLME---FYAKET-GEVNNFLA-----------LSLSSRKNLCIHPEVSSLRFGKEVD 131
Query: 195 EECKLLLGDRNLG----------CPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVV 244
+C L C ++ V L G +++++DL + G+
Sbjct: 132 GKCHSLTASYIRAQRHSNPNQPVCRFYEEFDAVGRQVPLPAG----IYNLDDLKDFGRRK 187
Query: 245 RGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAG 303
C YY AR A +V Y Y+++P I + ++ K ++++ DEAHNI+++ D+
Sbjct: 188 GWCPYYLARYSILHANIVVYSYHYLLDPKIADLVSKELAKKSVVVFDEAHNIDNVCIDSM 247
Query: 304 SVDI 307
SV+I
Sbjct: 248 SVNI 251
>gi|365985379|ref|XP_003669522.1| hypothetical protein NDAI_0C06200 [Naumovozyma dairenensis CBS 421]
gi|343768290|emb|CCD24279.1| hypothetical protein NDAI_0C06200 [Naumovozyma dairenensis CBS 421]
Length = 851
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 92/179 (51%), Gaps = 18/179 (10%)
Query: 146 IFYASRTHSQISQVISEYKKTAY-----------RVPMAVLASRKHYCTNKYVRDKENID 194
I++ SRTHSQ+SQ S+ + + R+ L S+K C N V+ + +D
Sbjct: 232 IYFTSRTHSQLSQFASQLRLPTFPSSFKDDVPHERIKYIPLGSKKILCINPNVKKFKTVD 291
Query: 195 ---EECKLLLGDRNLGCPQFKNV---HKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCS 248
+ C + GCP ++N H R + + +VHDIED V VG+ + C
Sbjct: 292 AINDACSETRHSKE-GCPFYQNTPTWHNDRDTLAFRDNVYEDVHDIEDTVTVGESLGVCP 350
Query: 249 YYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDI 307
YYA R A+++ PY Y+ + +R ++++D++ +I+I+DEAHN+ D S +I
Sbjct: 351 YYAIRDSIPGAEVITLPYQYLFSESMRESLKIDLENSIVIIDEAHNLIDTINSIHSAEI 409
Score = 79.0 bits (193), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 132/320 (41%), Gaps = 74/320 (23%)
Query: 463 LNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFG----TCLEAPHVI-DVDLQVL 517
L P+ F+ + E S +IL GT+ P++ F L T HVI D +L+
Sbjct: 557 LEPSKQFEPIIEKSKCVILAGGTMEPISDFYDNLFPSISKDLITSFSCDHVIPDKNLETF 616
Query: 518 T----------------SVISTGPDNYPLNASYKTADG---------YKLMEKLCNRWRE 552
S+++ + L S Y+ ++ + ++W+
Sbjct: 617 IINESQFEFTFEKRQNISLVNGALFQFYLQLSQNVPKSGGIVGFFPSYQYLQFIIDKWKH 676
Query: 553 TGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKC---AVVRKKRVKREGNND 609
G + +L + +F E K G L Y +++ G A+V K EG
Sbjct: 677 AGLFDKLYKIRKIFFESKDGPDP-----LSEYSEAVTNGDGAILFAIVGGKL--SEG--- 726
Query: 610 LNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKY------------NDT 657
I Q+N +CR ++VG+P+PN+ ++ +KK + D
Sbjct: 727 ---INFQDN----------LCRAIVMVGLPYPNVFSGELLVKKNHLEKKILKEGGSKQDV 773
Query: 658 YRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLR 717
+++N E C +A+NQ++GR IRH D+ + LLD+RF R +S W+
Sbjct: 774 STATRNFY---EIIC---MKAVNQSVGRAIRHANDHATVYLLDKRFISPNIRTKLSHWIS 827
Query: 718 KSIKQYDSFDASLEGLKSFF 737
I++ D+ ++ K+FF
Sbjct: 828 GRIQKEDTIMEVMKKTKNFF 847
Score = 54.7 bits (130), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 41/65 (63%), Gaps = 5/65 (7%)
Query: 28 PYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCKLKNQ 87
PY+PY QL M V L+ ++ A+LESPTGTGK+LSL+C+T+ W + K +
Sbjct: 18 PYKPYDIQLQLMKCVYDVLNEDKKI----AILESPTGTGKTLSLICATITWLRENK-ADY 72
Query: 88 LANIS 92
LA IS
Sbjct: 73 LAGIS 77
>gi|242207140|ref|XP_002469424.1| predicted protein [Postia placenta Mad-698-R]
gi|220731453|gb|EED85297.1| predicted protein [Postia placenta Mad-698-R]
Length = 785
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 138/327 (42%), Gaps = 70/327 (21%)
Query: 463 LNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFG----TCLEAPHVIDV-DLQVL 517
LNP+ F+++ +++ SI+L GT+SP++ +L + H+I +LQ L
Sbjct: 477 LNPSTHFRELIDIARSIVLAGGTMSPVSDVIHQLFMGLEPSRIRTFSCGHIIPTSNLQTL 536
Query: 518 TSVISTGPDNYPLNASYKTAD----------------------------GYKLMEKLCNR 549
V+ GP L Y+ Y + + +
Sbjct: 537 --VLKKGPRGGDLLFKYEQRGNQAIIAELGQILLNFVNVVPGGMVVFLPSYSFLHTMMSA 594
Query: 550 WRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKC--AVVRKKRVKREGN 607
W +G +L ++K +F EP+ Q E VL+ Y +I + AVV K EG
Sbjct: 595 WEGSGLMEKLKSRKRVFSEPQDAGQ--IEAVLREYSEAIHRTGALLFAVVGAKL--SEGL 650
Query: 608 NDLNTIESQENANKKGASFLAVCRGKIVVGIPFPN------------INDIQVSLKKKYN 655
N + + R +++G+PF N +N ++ L+ K +
Sbjct: 651 NFTDDL----------------ARAVLIIGLPFANLASPELRERMSYVNRLEQQLRAKGD 694
Query: 656 D-TYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISK 714
T +S + E Y N A+NQ+IGR IRHR D+ ++IL+D R+ R R + K
Sbjct: 695 AVTKGASATKDAATELYENMCMNAVNQSIGRAIRHRGDWASLILIDGRYASSRIRNKLPK 754
Query: 715 WLRKSIKQYDSFDASLEGLKSFFRDVK 741
W+ + ++F ++ + FFR+ K
Sbjct: 755 WIGGNTTVTETFGQAMREMGKFFREKK 781
Score = 54.3 bits (129), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 46/76 (60%), Gaps = 10/76 (13%)
Query: 27 FPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW---QQNCK 83
FP++PY QL M + ++++ + ++ESPTGTGK+LSLLCS+L W +Q
Sbjct: 14 FPFKPYDIQLDLMRHLYASVEDRK-----ITIVESPTGTGKTLSLLCSSLTWLKDEQERA 68
Query: 84 LKNQLANI--SHSKPD 97
K +L+ + SH PD
Sbjct: 69 RKGKLSELGESHEGPD 84
Score = 42.4 bits (98), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 65/157 (41%), Gaps = 26/157 (16%)
Query: 146 IFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEECKLLLGDRN 205
I+YASRTH+Q++QV+ E +K + + + + + R ++ + D +
Sbjct: 197 IYYASRTHTQLAQVLHELRKLKLMLNVTLASVPEEAAAVSGKRRLPEVEND------DDD 250
Query: 206 LGCPQFKNVHKVRGHPSLQKGGCHEV--------------------HDIEDLVNVGQVVR 245
LG + P K CH + DIEDLV GQ
Sbjct: 251 LGSSYASMMMSRSRTPEKGKKRCHYLPPPEDESKMLDLRDQILASPKDIEDLVATGQESE 310
Query: 246 GCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDI 282
C Y+ +R AQLV PY+ ++ R A+ +D+
Sbjct: 311 TCPYFGSRRAIRQAQLVLLPYNLLLQKTAREALGIDL 347
>gi|195420015|ref|XP_002060745.1| GK24076 [Drosophila willistoni]
gi|195441759|ref|XP_002068656.1| GK23573 [Drosophila willistoni]
gi|194156830|gb|EDW71731.1| GK24076 [Drosophila willistoni]
gi|194164741|gb|EDW79642.1| GK23573 [Drosophila willistoni]
Length = 216
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 121/265 (45%), Gaps = 68/265 (25%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ GI V FP++PY Q FM +VI L RDG + +LESP TG +L L+
Sbjct: 6 IAGIPVHFPFEPYEVQRAFMEKVIICL----RDG-TNGVLESP--TGTGKTLSLLCLS-- 56
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVK 139
LA I + + + V
Sbjct: 57 --------LAWIRTRQSEQQGV-------------------------------------- 70
Query: 140 KKMTPTIFYASRTHSQISQVISEYKKTAYR-VPMAVLASRKHYCTNKYV-RDKENIDE-- 195
P + YASRTHSQ++Q + E K++AY + VL SR C + V R++ N ++
Sbjct: 71 ----PKVIYASRTHSQLTQAMRELKRSAYAGMRSVVLGSRDQLCIHPEVMREQGNSNKVN 126
Query: 196 ECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSM 255
CK+ + + C V + HP + + DIEDLV VGQ ++ C Y+A++ +
Sbjct: 127 MCKMRVHSKT--CSFQLRVESKKDHPDFRGPS---IMDIEDLVKVGQKLKMCPYFASKKL 181
Query: 256 ADDAQLVFCPYSYIINPVIRGAMEV 280
+DA + F PY+Y+++P+ R A +V
Sbjct: 182 VNDADITFMPYNYLLDPMARKANKV 206
>gi|118373403|ref|XP_001019895.1| hypothetical protein TTHERM_00588880 [Tetrahymena thermophila]
gi|89301662|gb|EAR99650.1| hypothetical protein TTHERM_00588880 [Tetrahymena thermophila SB210]
Length = 1492
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 128/554 (23%), Positives = 224/554 (40%), Gaps = 108/554 (19%)
Query: 220 HPSLQKGGCHEVH--DIEDLVNVGQVVR-GCSYYAARSMADDAQLVFCPYSYIINPVI-- 274
+P +++ E DIED+ ++ Q GC Y+ ++ A A++V+ Y+Y+I I
Sbjct: 950 YPKVKRNFQQEFMLPDIEDINHLFQEKELGCPYFYSKEAAKSAKIVYSTYNYVIKQHILS 1009
Query: 275 RGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQVCSVNPMIYQPLI 334
R + I+I DE HNI ++A E EQ ++N +
Sbjct: 1010 RVKHLFENSDLIVIFDEGHNIAELA------------------EQEQKLTINKDHWDTFY 1051
Query: 335 EMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALREL--QEANISRQCFPILLECATKA 392
E + + ++ K + T + L++L +E Q F IL++ +K
Sbjct: 1052 ETVKKFNSYFQKSK-----------LNNETSN-TLKQLIAKEIENEAQYFKILIQRQSKK 1099
Query: 393 I-----KEATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDY---QLALQK--- 441
+E D ++ + + + + E S Y +N + + Y + +QK
Sbjct: 1100 QEKQKSQENKDEKNPINLIKEILLKKSENKESGKQYIKQKNFTFIDLYDQIKQCIQKQHL 1159
Query: 442 ------------YIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSL--SIILTSGTLS 487
+I++D +P + CL+ +F+ + + S I +SGTL
Sbjct: 1160 IIARQDVKDLVDFIEKD--DPEDLKLDEQIIGCLSAKEIFRKIKDKIRVNSFIFSSGTLE 1217
Query: 488 PMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDN-YPLNASYK---TADGYKLM 543
P + + + + F E+ ++ + + T VI+ + LN K + +
Sbjct: 1218 PYDLITDSICLPF-EIYESKNIFNSQENLFTQVITKYQEKEIHLNFENKEDLIVNAINAI 1276
Query: 544 EKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSI-SQGSKCAVVRK--- 599
+ + N + +LN K+ + K S L YY I S K V K
Sbjct: 1277 QDILNIF--LNYTRKLNKKQGFLIFFKSYS------YLNQYYKQIRSIAKKQFYVYKETS 1328
Query: 600 --KRVKREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPN 642
K K + N IES N K FL VC+GK I++G+P+P
Sbjct: 1329 DSKDFKAQFEQYKNNIES----NYKNCIFLGVCKGKLSEGIDFKDNLCRIAIILGVPYPQ 1384
Query: 643 INDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDER 702
+ D V+ ++K Y+ N+WY + +NQA GRCIRH+ D+G I LD
Sbjct: 1385 LFDPYVNCQRK---RYQLK---FMKNDWYEKVTSKVVNQAAGRCIRHKNDWGCIFFLDSN 1438
Query: 703 FQEERNRAHISKWL 716
F + + +IS W+
Sbjct: 1439 FSHYKIKKNISGWI 1452
>gi|260832748|ref|XP_002611319.1| hypothetical protein BRAFLDRAFT_210722 [Branchiostoma floridae]
gi|229296690|gb|EEN67329.1| hypothetical protein BRAFLDRAFT_210722 [Branchiostoma floridae]
Length = 692
Score = 95.1 bits (235), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 142/334 (42%), Gaps = 46/334 (13%)
Query: 431 HVSDYQLALQKYIK--RDSKNPGGNWTHT-LSLWCLNPAVVFKDVAELSLSIILTSGTLS 487
H+ + LAL K R N G + + L LNPA+ F+++ + + ++I+ GT+
Sbjct: 353 HIEAFLLALTNADKDGRVVINKQGRLSQSSLRFLLLNPALHFREIVQQARAVIMAGGTMQ 412
Query: 488 PMNSFSSELGVQFG------TCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTADG-Y 540
P++ F L G T HVI +L + +GP ++ SY+ + Y
Sbjct: 413 PVSEFKEHLLFAAGVEPQRITEFSCGHVIP-GCNLLPVALGSGPAGGAVDFSYEHRNKEY 471
Query: 541 KLME------KLCNR---------------------WRETGQWSRLNAKKPLFVEPKGGS 573
++E LCN + ++G RL+ +K +F EPK S
Sbjct: 472 MMVELGRVLVNLCNLVPAGVCVFFPSYEYERQVYKFFEDSGVLKRLSVRKQVFREPKKAS 531
Query: 574 QEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGK 633
Q D VL Y I +C K + G + + + + + L C
Sbjct: 532 QVD--QVLSDYSKCIQ---RCKTQGYKAMPLTGALLFSVVGGKMSEGINFSDDLGRC--V 584
Query: 634 IVVGIPFPNINDIQVSLKKKYND-TYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFD 692
++VG+P+PNI ++ K Y D T + G Y N +A+NQ+IGR IRH+ D
Sbjct: 585 VMVGLPYPNIKSPELKEKMDYLDATMPHTTGKSPGQIHYENLCMKAVNQSIGRAIRHKED 644
Query: 693 YGAIILLDERFQEERNRAHISKWLRKSIKQYDSF 726
Y I+LLD R+ A + W+ ++ F
Sbjct: 645 YATIVLLDRRYFRPNVCAGLPNWISAHLQTISKF 678
Score = 82.4 bits (202), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 93/207 (44%), Gaps = 34/207 (16%)
Query: 143 TPTIFYASRTHSQISQVISEYKKTAY--RVPMAVLASRKHYCTNKYVRD----------- 189
P I+Y SRTHSQ++Q + E +K+ + V + L SR++ C N VR
Sbjct: 1 VPQIYYCSRTHSQLAQFVREVQKSPFGKDVRVVSLGSRQNLCINDSVRKLGSSHLINDRC 60
Query: 190 --------KENIDEEC-------KLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDI 234
KE ++C K + GCP +++ P+ EV DI
Sbjct: 61 LEMQNNKKKEESRDKCDEAERKQKRKRKGESAGCPFHQHI------PTYSDEVLAEVRDI 114
Query: 235 EDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHN 294
E LV G+ + C YY R AQLV PY+ +++ R + + G ++I+DEAHN
Sbjct: 115 EQLVVKGRKMDACPYYGTRYSIPAAQLVALPYNTLLHRHTREVSGIKLAGNVVIIDEAHN 174
Query: 295 IEDIARDAGSVDIDEDVLLKLQMELEQ 321
+ D SV+I + + +L Q
Sbjct: 175 LVDTITGIHSVEITGGQIARAYSQLTQ 201
>gi|291414826|ref|XP_002723661.1| PREDICTED: excision repair cross-complementing rodent repair
deficiency, complementation group 2 protein [Oryctolagus
cuniculus]
Length = 713
Score = 94.7 bits (234), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 130/598 (21%), Positives = 234/598 (39%), Gaps = 135/598 (22%)
Query: 231 VHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDI-KGAILIL 289
+++++DL +GQ C Y+ AR A +V Y Y+++P I + ++ + A+++
Sbjct: 127 IYNLDDLKALGQRQGWCPYFLARYSILHANVVVYSYHYLLDPKIADLVSKELARKAVVVF 186
Query: 290 DEAHNIEDIARDAGSVDIDEDVLLKLQMELEQ----VCSVNPMIYQPLIEMTQDLVGWIE 345
DEAHNI+++ D+ SV++ L + Q LE V + Q L + + LV +
Sbjct: 187 DEAHNIDNVCIDSMSVNLTRRTLDRCQGNLETLQKTVQRIKETDEQRLRDEYRRLVEGL- 245
Query: 346 RRKATLAKREFQHFFSCWTGDKALRE--------------------------LQEANISR 379
R+A++A+ H + D+ L+E L+ ++ +
Sbjct: 246 -REASVARETDAHLANPVLPDEVLQEAVPGSIRTAEHFLGFLRRLLEFVKWRLRVQHVVQ 304
Query: 380 QCFPILLECAT-------KAIKEATDTESELPH------LSGMSVITLEGLFSSLTYFFS 426
+ P L K ++ + L H L+ S +TL F++L
Sbjct: 305 ESPPAFLSSLAQRVCIQRKPLRFCAERLRSLLHTLEIADLADFSPLTLLANFATLV---- 360
Query: 427 RNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTL 486
++ + + ++ + D + P L C++ ++ K V E S+I+TSGTL
Sbjct: 361 --STYAKGFTIIIEPF---DDRTPTIA-NPVLHFSCMDASLAIKPVFERFQSVIITSGTL 414
Query: 487 SPMNSFSSELG---VQFGT--------CLEAPHVIDV--DLQVLTSVISTGPD------- 526
SP++ + L V T CL P ++ D ++S + D
Sbjct: 415 SPLDIYPKILDFHPVTMATFTMTLARVCL-CPMIVGRGNDQVAISSKFESREDMAVIRNY 473
Query: 527 -NYPLNASYKTADG-------YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFE 578
N L S DG Y+ ME W E G + K LF+E + G++
Sbjct: 474 GNLLLEMSAVVPDGIVAFFTSYQYMESTVASWYEQGILENIQRNKLLFIETQDGAETS-- 531
Query: 579 IVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGI 638
+ L+ Y + G +GA L+V RGK+ GI
Sbjct: 532 VALEKYQEACENG------------------------------RGAILLSVARGKVSEGI 561
Query: 639 PF-------------PNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGR 685
F P + LK + Y + + N++ A R Q +GR
Sbjct: 562 DFVHHYGRAVIMFGVPYVYTQSRILKARLE--YLRDQFQIRENDFLTFDAMRHAAQCVGR 619
Query: 686 CIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYD---SFDASLEGLKSFFRDV 740
IR + DYG ++ D+RF R + +W+++ + + + D ++ K F R +
Sbjct: 620 AIRGKTDYGLMVFADKRFARADKRGKLPRWIQEHLTDANLNLTVDEGVQVAKYFLRQM 677
>gi|145474073|ref|XP_001423059.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124390119|emb|CAK55661.1| unnamed protein product [Paramecium tetraurelia]
Length = 306
Score = 94.7 bits (234), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 137/296 (46%), Gaps = 49/296 (16%)
Query: 23 IQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW---- 78
I+ ++P+ PY SQL + +L + G ++ ESPTGTGKS +L+ L +
Sbjct: 13 IKSQYPFPPYQSQLDLSKDIYVSLAQ----GTKVSIFESPTGTGKSYALIEGALNYLEDI 68
Query: 79 --------QQNCKLKNQLANISHSKPDTEAVTDPL------ANGGGFIPESQPSTIPPST 124
+Q C++ + + + ++PD E +PL + I +
Sbjct: 69 KSNTLIKVKQKCQIDDGMPDW-FNEPDVELKLNPLRKPNENKQQKKHVKLVDDDAIFDYS 127
Query: 125 NGQTAQVAMNNKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTN 184
+ + Q+ + +++ K I Y SRTHSQ+ Q I+E +++ ++V ++ + SR+ C N
Sbjct: 128 SSEETQINLRGQSLNDK----IIYCSRTHSQLKQFINEIRRSKHKVRVSTIGSRQQLCVN 183
Query: 185 KYVRDKEN-----IDEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVN 239
+ + K N ++ CK C +K++ + + E+ DI DL+
Sbjct: 184 QSILSKANNNVNKLNHLCK----SHKKQCSYYKSLDTLEQYT-------QEIFDINDLLT 232
Query: 240 VGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNI 295
+ + C YYAA+ ++ A ++ PY ++ + + I+I+DEAHN
Sbjct: 233 ASKKCQSCPYYAAKELSLQADIICTPYQLLMESIDQYI------EPIIIVDEAHNF 282
>gi|206558225|sp|A5DNW6.2|CHL1_PICGU RecName: Full=ATP-dependent RNA helicase CHL1; AltName:
Full=Chromosome loss protein 1
gi|190348421|gb|EDK40869.2| hypothetical protein PGUG_04967 [Meyerozyma guilliermondii ATCC
6260]
Length = 825
Score = 94.7 bits (234), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 87/368 (23%), Positives = 150/368 (40%), Gaps = 92/368 (25%)
Query: 28 PYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLA---------- 77
PY+PY Q+ M + T+ + G L ESPTGTGK+LS++CS++
Sbjct: 13 PYKPYDIQVQLMDAIYDTIQNKYKVG----LFESPTGTGKTLSIICSSMTWLRNYKKTQD 68
Query: 78 -------------------------WQQNCKLKNQLANISHSKPDTEAVTDPLA------ 106
W + +KN + S D E + L+
Sbjct: 69 HSTMGSNSSNDNDPNQTSDSDEEPDWVKEAHIKNIRSRTSGLAIDYERHLEELSQTPHAG 128
Query: 107 -----------------NGGGFIPESQPS-TIPPSTNGQTAQVAMNNKNVKKKM------ 142
N F+P+ S T S + A++ + K++
Sbjct: 129 HTVELGQRTHKRKKRATNDDDFLPDDYNSDTDSNSVETKNAKLQQEINQIMKRVDGSDGK 188
Query: 143 TP--------TIFYASRTHSQISQVISEYKKTAY---------RVPMAVLASRKHYCTN- 184
TP TIF++SRTHSQ+SQ + T++ R+ L+SRK C +
Sbjct: 189 TPGFVNTCPVTIFFSSRTHSQLSQFAHQLSITSFESSLGEIAERIKFMPLSSRKQLCIHP 248
Query: 185 --KYVRDKENIDEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHE---VHDIEDLVN 239
+ +++ C L + C V+ +Q+ + + DIE+L
Sbjct: 249 KVSSLSSVSAVNDACVELQQKSDKRCEFMPRVNNPESDQLVQRFADYSFAVIKDIEELHE 308
Query: 240 VGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIA 299
+G ++ C YYA+R ++++++ PY ++ R ++ + IK +I+I+DEAHN+ D+
Sbjct: 309 LGADLKVCPYYASRRNIENSEIIALPYQMLLQQATRKSLGLSIKDSIVIIDEAHNLLDVI 368
Query: 300 RDAGSVDI 307
SV I
Sbjct: 369 SSINSVSI 376
Score = 91.3 bits (225), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 145/319 (45%), Gaps = 69/319 (21%)
Query: 463 LNPAVVFKDVAELSLSIILTSGTLSPMNSFSSEL-------GVQFGTCLEAPHVI---DV 512
L+P+ +F+DV E + ++L GT+ P+ + L ++ TC H++ ++
Sbjct: 524 LDPSEMFRDVVESARCVLLCGGTMEPVEDYYRYLFPYVPGEKIKKFTC---GHIVPQENI 580
Query: 513 DLQVLTSVISTGPD------NYPL-----------------NASYKTADGYKLMEKLCNR 549
++ ++S +T D N P N A YK + +L +
Sbjct: 581 EVLTVSSRKTTVFDFSYHKRNDPSMLRELALSLQDICERVPNGIIVFAPSYKYLNQLIST 640
Query: 550 WRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKC---AVVRKKRVKREG 606
WR+ G ++++ K +F+E + E +L+ Y + ++GS +VV K
Sbjct: 641 WRKDGNLAKISTLKQVFLESSDSTS--IESILRDY-GAAARGSGAILFSVVGGKM----- 692
Query: 607 NNDLNTIESQENANKKGASFL-AVCRGKIVVGIPFPNINDIQVSLKKKYNDTYRSSKNLL 665
+G +F + R I++G+P+PN ++ K+K+ + SK
Sbjct: 693 --------------SEGVNFSDELARAVIMLGLPYPNAFSGELIAKRKFIEETTLSKGGT 738
Query: 666 SG------NEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKS 719
E+Y N RA+NQ++GR IRH DY I+L D R+ ++ +S W+R S
Sbjct: 739 QAMAKKNSREYYENICMRAVNQSVGRSIRHANDYSVIVLFDTRYNSSHIQSKLSGWMRSS 798
Query: 720 IK-QYDSFDASLEGLKSFF 737
I+ + +SFD +LE + FF
Sbjct: 799 IRPERESFDMTLERIADFF 817
>gi|290983090|ref|XP_002674262.1| DNA repair helicase UVH6 [Naegleria gruberi]
gi|284087851|gb|EFC41518.1| DNA repair helicase UVH6 [Naegleria gruberi]
Length = 753
Score = 94.7 bits (234), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 121/575 (21%), Positives = 223/575 (38%), Gaps = 123/575 (21%)
Query: 231 VHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKG-AILIL 289
V+ + DL G+ C Y+ +R + A +V YSY+++P I + ++ +I++
Sbjct: 154 VYTMRDLKVFGKKKGWCPYFLSRRAIEYANVVVYSYSYLLDPKISSIISKNLPANSIVVF 213
Query: 290 DEAHNIEDIARDAGSVDIDEDVL-------LKLQMELEQVCSVNPMIYQPLIEMTQDLVG 342
DEAHNI+++ +A S++ID D+L KL+ + + VN Q D +G
Sbjct: 214 DEAHNIDNVCIEALSINIDRDILGVAKSNLTKLEENIANMEKVNSQRLQEEYRRLVDGLG 273
Query: 343 WIERRKATLAKREFQHFFS--CWTGDKALRELQEANISR--QCFPILLECATKAIKEATD 398
+ +++ R S GD + E NI + + AT K
Sbjct: 274 AVGVGRSSDVIRSDDELLSNPVLPGD-IMTEAVPGNIRKAHHFVKFMKRFATHVNKRLQT 332
Query: 399 TES--ELPH------------------------LSGMSVITLEGLFSS-----LTYFFSR 427
+S E P LS M+ + ++ ++ + F +
Sbjct: 333 QKSVNETPEQFLNHVLENIDIDSRSLRFCSERLLSLMNTLEIKNIYEFNGIKIIMDFATL 392
Query: 428 NGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVF-KDVAELSLSIILTSGTL 486
G++ + + ++ + R NP L C++ ++ K + +++LTSGTL
Sbjct: 393 IGTYQEGFVIIIEPHDPRTPTNPDP----VLQFSCMDASLAISKPIFGRFKTVVLTSGTL 448
Query: 487 SPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVIST-GPDNYPLNASYK---------- 535
SP++ + L +F + + + + + ++ T G D + Y+
Sbjct: 449 SPLDMYPKLL--KFKPIISKSLEMTLTRECICPLVLTRGSDQVAVTTKYRFRNDASVQRN 506
Query: 536 -----------TADG-------YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDF 577
DG Y+ ME + + W G S + K +F+E ++
Sbjct: 507 YGSLLLELSKYIPDGIVCFFTSYQYMEDIVSFWNSVGLLSSITNHKLVFIETPNTAET-- 564
Query: 578 EIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVG 637
I L++Y + G +GA F ++ RGK+ G
Sbjct: 565 AIALENYRKACDCG------------------------------RGAIFFSIARGKVAEG 594
Query: 638 IPFPN-----INDIQVSLKKKYNDTYRSSKNLLSGN------EWYCNQAFRALNQAIGRC 686
I F + I V + + ++ N L N + A R +Q IGR
Sbjct: 595 IDFDGHYGRCVVMIGVPFQNTESKILKARLNYLRQNFAIKEETFLTFDALRHASQCIGRV 654
Query: 687 IRHRFDYGAIILLDERFQEERNRAHISKWLRKSIK 721
IR++ DYG ++L D+R+ + R + KW+ K IK
Sbjct: 655 IRNKADYGIMVLADKRYNQPDKRNKLPKWIAKQIK 689
>gi|125550818|gb|EAY96527.1| hypothetical protein OsI_18432 [Oryza sativa Indica Group]
Length = 734
Score = 94.7 bits (234), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 152/743 (20%), Positives = 281/743 (37%), Gaps = 186/743 (25%)
Query: 122 PSTNGQTAQVA--MNNKNVKKKMTPT-IFYASRTHSQISQVISEYKKTAYRVPMAV---- 174
P+ G+TA + + + ++ P + Y +RT ++ + ++E + +P A
Sbjct: 19 PTGTGKTAALISLITSYSLASPSRPLRLIYCTRTVHEMEKTLAELRLLFAHLPAAASRSL 78
Query: 175 ----LASRKHYCTN---KYVRDKENIDEECKLLLG-----------DRNLGCPQFKNVHK 216
L+SRK+ C + ++++D C+ L D C F++ +
Sbjct: 79 LALGLSSRKNLCVHPQASAAAARDSVDTACRRLTASWVRDRAASDPDSTPLCDFFESFDR 138
Query: 217 VRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRG 276
L V+ + DL +G+ C Y+ AR M A +V Y Y+I+P +
Sbjct: 139 AAAAGDLASYMPPGVYTLADLRALGRDRGICPYFLARQMVKYANVVVYSYQYLIDPKVAS 198
Query: 277 AMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQVCSVNPMIYQPLIE 335
+ ++ K +++ DEAHNI+++ +A SV I + L + L ++
Sbjct: 199 IVSREMQKECVVVFDEAHNIDNVCIEALSVSIRKQTLEGAERNLRRI------------- 245
Query: 336 MTQDLVGWIERRKAT---------------LAKREFQHFFSCWTGDKALRE--LQEA--- 375
+Q+ I+R KAT LA+R W + AL E L+EA
Sbjct: 246 -SQE----IDRFKATDANRLRAEYNRLVDGLAQRGNLPISDAWLANPALPEDILKEAVPG 300
Query: 376 NISR-QCFPILLECATKAIK---EATDTESELPHLSGMSVITLEGL-------------- 417
NI R + F +L + + E + E+E+P S+ + G+
Sbjct: 301 NIRRAEHFLAVLRRLVRFLDGRLETENVENEMPVAFVASIHSQAGIDQKMLRFCYDRLHS 360
Query: 418 ---------------FSSLTYFFSRNGSHVSDYQLALQKYIKR--DSKNPGGNWTHTLSL 460
++ F + G++ + + ++ Y +R D ++P + L
Sbjct: 361 LMLTLEITDTDEFMHIQTICDFATLIGTYTRGFSIIIEPYDERMPDIRDP------VIQL 414
Query: 461 WCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQ-VLTS 519
C + ++ + V E ++++TSGTLSP++ + L F + + + +
Sbjct: 415 SCHDASLAIQPVFERFQTVVITSGTLSPIDLYPRLL--NFNPVISRSFTMSLTRDCICPM 472
Query: 520 VISTGPDNYPLNASY---------------------KTADG-------YKLMEKLCNRWR 551
V++ G D P++ + DG Y M+ + N W
Sbjct: 473 VLTRGSDQLPVSTKFDMRSDPGVVRNYGRLLLEMASAVPDGIVCFFVSYSYMDGIVNSWN 532
Query: 552 ETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLN 611
E G + K +F+E + + L +Y + G
Sbjct: 533 EMGILQDIMQHKLVFIETPDVVET--TLALDNYRKACDCG-------------------- 570
Query: 612 TIESQENANKKGASFLAVCRGKIVVGIPFP-NINDIQVSLKKKYNDTYRSSKNLLSGNEW 670
+GA F +V RGK+ GI F + + + + Y S+ LL+ E+
Sbjct: 571 ----------RGAIFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQ--YTLSRILLARLEY 618
Query: 671 YCNQ---------AFRALNQA---IGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRK 718
F AL QA +GR IR + DYG +I D+R+ R+ + W+
Sbjct: 619 LRETFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILS 678
Query: 719 SIKQYD---SFDASLEGLKSFFR 738
+ S D +L + F R
Sbjct: 679 HLHDAHLNLSTDMALHIAREFLR 701
>gi|195397135|ref|XP_002057184.1| GJ16955 [Drosophila virilis]
gi|194146951|gb|EDW62670.1| GJ16955 [Drosophila virilis]
Length = 799
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 134/322 (41%), Gaps = 59/322 (18%)
Query: 455 THTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEA------PH 508
T TL LNPA F D+ + ++I+ GT+ P + +++L F C E H
Sbjct: 496 TCTLKYLLLNPAEHFADIVSEARALIIAGGTMQPTHELTAQL---FAHCPERVVQRFYSH 552
Query: 509 VIDVDLQVLTSVISTGPD------NYPLNASYKTAD----------------------GY 540
V+ D V V+ TGP NY AS Y
Sbjct: 553 VVPAD-AVQPFVLPTGPTGAKLCFNYAQRASPAMLQELSMVLQNLCGVLPAGVVCFLPSY 611
Query: 541 KLMEKLCNRWRETGQWSRLNAKKPLFVEPK---GGSQEDFEIVLKHYYNSISQGSKCAVV 597
++ + ++G RL +K +F E G E +L+ Y ++I Q + A++
Sbjct: 612 DYLDTVYGHLEQSGALQRLGQRKRIFRETAGSGSGGVGGVEQLLQQYADAIGQNAGGALL 671
Query: 598 RKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYNDT 657
L+ + + + A L RG IVVG+P+PN ++ + ++ D
Sbjct: 672 ------------LSVVGGKLSEGLNFADDLG--RGVIVVGMPYPNRTAPELKERMRHLDE 717
Query: 658 YRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLR 717
S +GNE+Y N +A+NQ IGR +RH DY + LLDER+ R + + W+
Sbjct: 718 TLGSG---AGNEYYENLCMKAVNQCIGRSVRHIRDYACVYLLDERYASARIQQKLPAWIA 774
Query: 718 KSIK-QYDSFDASLEGLKSFFR 738
+ I D F A FF+
Sbjct: 775 QHITVASDGFGAVQARTARFFK 796
Score = 49.3 bits (116), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 29/52 (55%), Gaps = 5/52 (9%)
Query: 27 FPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
FPY PY Q M ++ L+R Q + ESPTGTGKSL+L C L W
Sbjct: 18 FPYTPYAIQEQLMQQLFLVLERKQ-----IGIFESPTGTGKSLTLTCGALTW 64
Score = 42.0 bits (97), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 50/179 (27%)
Query: 146 IFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEECKLLLGDRN 205
IFY SRTHSQ++Q+++E +KT + ++ R C + LG R
Sbjct: 201 IFYCSRTHSQLAQIVTELRKTPH---------------GQHAR--------C-IALGSRQ 236
Query: 206 LGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCP 265
C + ++L G C YYA R+ AQLV P
Sbjct: 237 QLC-----------------------INAQELAAAGAACGACPYYATRAAQAQAQLVLLP 273
Query: 266 YSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQVCS 324
YS ++ R + +D++GAI+I+DEAHN+ D S ++ L +LQ+ +Q+ +
Sbjct: 274 YSLLLQRSSRQQLGIDLRGAIIIVDEAHNLLDTIAQLHSSELS---LGQLQLARQQLAA 329
>gi|353235657|emb|CCA67667.1| related to CHL1-protein of the DEAH box family [Piriformospora
indica DSM 11827]
Length = 769
Score = 94.4 bits (233), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 96/188 (51%), Gaps = 14/188 (7%)
Query: 146 IFYASRTHSQISQVISEYKKT------AYRVPMAV---LASRKHYCTNKYVRDKE-NIDE 195
IFY SRTHSQ+SQ+ E++K A P+A L SRK+ C N+ +R K ++DE
Sbjct: 196 IFYTSRTHSQLSQLQVEFEKLKHLPSQANDRPIARVVPLGSRKNLCINEELRAKGGDLDE 255
Query: 196 ECKLLLGDRNLG-CPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARS 254
C+ L+ ++ CP + L+ DIEDL +G+ ++ C YY +R
Sbjct: 256 GCRELIQEKGKKRCPYLPPAGDISAMADLRDQILATPRDIEDLAQLGKELKTCPYYGSRK 315
Query: 255 MADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLK 314
A+LV PY+ ++ R + VD+ +I+DEAHN+ D +V + VL K
Sbjct: 316 AIKQAELVTLPYNLLLQKQARETLGVDLTDQTVIIDEAHNLIDTILSIHTVSLPHSVLKK 375
Query: 315 LQMELEQV 322
LEQ+
Sbjct: 376 ---SLEQL 380
Score = 67.0 bits (162), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 100/231 (43%), Gaps = 46/231 (19%)
Query: 457 TLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFG----TCLEAPHVIDV 512
TL LNP+ VF+D+ + + S++L GT++PM+ F S+L + HV+
Sbjct: 524 TLKYQLLNPSRVFRDIVDSARSVVLAGGTMAPMSDFHSQLVPYLSEDRISLFSCGHVMPE 583
Query: 513 DLQVLTSVISTGPDNYPLNASYK---------------------TADG-------YKLME 544
+ + T V+S GP L ++ DG Y +
Sbjct: 584 E-NLKTVVVSRGPTGKGLVYKHQQQKDPAVMDELGQILANLVNIVPDGMVVFFPSYNFLN 642
Query: 545 KLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKR 604
L RW G RL KK LF EP+ G D VL+ Y ++I ++K K+
Sbjct: 643 ALRARWGGNGTLERLKNKKKLFFEPQEGGSVD--AVLQEYTDAIR-------LKKPEDKQ 693
Query: 605 EGNNDLNTIESQENANKKGASFL-AVCRGKIVVGIPFPNINDIQVSLKKKY 654
G L + ++ + +G +F + R +VVG+PF N I++ + ++
Sbjct: 694 TGALLLAVVGAKLS---EGLNFSDELSRAVVVVGLPFANATSIELKERMRF 741
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 42/72 (58%), Gaps = 9/72 (12%)
Query: 27 FPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCK-- 83
FPY +PY QL M + + ++ G A++ESPTGTGK+LSLL +L W Q+ K
Sbjct: 15 FPYDKPYNIQLDLMRHLFAAIE-----GKQVAVVESPTGTGKTLSLLSGSLTWLQDEKSR 69
Query: 84 -LKNQLANISHS 94
+K Q A + S
Sbjct: 70 AVKGQFAQLEES 81
>gi|409078986|gb|EKM79348.1| hypothetical protein AGABI1DRAFT_58886 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 867
Score = 94.4 bits (233), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 133/318 (41%), Gaps = 60/318 (18%)
Query: 462 CLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEA------PHVI-DVDL 514
LNPA F DV + + SIIL GT+SPM+ S+L F LE HVI + +L
Sbjct: 564 LLNPAPNFMDVVDEARSIILAGGTMSPMSDVVSQL---FSHALERIRTFSCGHVIPEKNL 620
Query: 515 QVLTSVISTGPDNYPLN-ASYKTAD---------------------------GYKLMEKL 546
Q L V++ P L + K D Y ++
Sbjct: 621 QAL--VVTKSPRGGSLEYKADKQGDPNVVAELGQILLNFANVIPAGVVVFFPSYNFLKFA 678
Query: 547 CNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREG 606
N W+ G R +AK+ +F EP G + D E VL Y A V ++G
Sbjct: 679 KNVWKAGGTLDRFSAKREVFFEPDGST--DVERVLGEY---------AAAATTPPVNKKG 727
Query: 607 NNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKY-------NDTYR 659
I ++ + + LA R IV+G+PF N+ ++ + KY + R
Sbjct: 728 AILFAVIGAKLSEGLNFSDDLA--RAVIVIGLPFANLGSPELKERLKYVKQLEERRGSKR 785
Query: 660 SSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKS 719
+ E Y N ++NQ+IGR IRH+ D+ ++ILLD+R+ R + +W+
Sbjct: 786 EKGQKDAAAELYENMCMNSVNQSIGRAIRHKGDWASLILLDQRYASSAIRMKLPQWIGGR 845
Query: 720 IKQYDSFDASLEGLKSFF 737
+ D F + L F+
Sbjct: 846 LFIPDGFGQVMRQLGQFY 863
Score = 85.5 bits (210), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 95/210 (45%), Gaps = 34/210 (16%)
Query: 146 IFYASRTHSQISQVISEYKKTAYRVPMAV-----------------------------LA 176
I+YASRTHSQ+SQV+ E ++ +AV L
Sbjct: 204 IYYASRTHSQLSQVLPELRRIKLSQAVAVIDLHPSSVPQKRGADVLHDVDSTTTRVVALG 263
Query: 177 SRKHYCTNKYVRDK-ENIDEECKLLLGDR-NLGCPQFKNVHKVRGHPSLQKGGCHEVHDI 234
SRK C N +R K ++DE C+ LL ++ + CP + + DI
Sbjct: 264 SRKQLCINDELRSKARDLDEACRELLSEKGDQRCPYLPPPGEDIKIIDFRDQILAAPKDI 323
Query: 235 EDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHN 294
EDL VG++ C Y+ +R A+LV PY+ ++ R A+ +D++ I+++DEAHN
Sbjct: 324 EDLAEVGRMADTCPYFGSRHAIPQAELVTLPYNLLLQKSAREALGIDLRDQIVVIDEAHN 383
Query: 295 IEDIARDAGSVDIDEDVLLKLQMELEQVCS 324
+ + + + L + L QVC+
Sbjct: 384 LIPTLLSLSTTHLPYHI---LDVSLRQVCA 410
>gi|449462346|ref|XP_004148902.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair helicase UVH6-like
[Cucumis sativus]
Length = 919
Score = 94.4 bits (233), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 161/749 (21%), Positives = 286/749 (38%), Gaps = 177/749 (23%)
Query: 122 PSTNGQTAQVA--MNNKNVKKKMTPT-IFYASRTHSQISQVISEYKKTA-YRVP------ 171
P+ G+T + + + + K P + Y +RT ++ + ++E + Y+V
Sbjct: 204 PTGTGKTIALLSLITSYALSKPQNPVKLIYCTRTVHEMEKTLAELRLLHDYQVQQLGPRA 263
Query: 172 --MAV-LASRKHYCTNKYV---RDKENIDEECKLLLGD--RNLG--------CPQFKNVH 215
+AV L+SRK+ C N V ++++D C+ L R + C F+
Sbjct: 264 QILAVGLSSRKNLCVNPNVLASESRDSVDAGCRKLTASWVRAMAAENPDVPTCEFFEQYE 323
Query: 216 KVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIR 275
K L G V+ ++DL G C Y+ AR M A +V Y Y+++P +
Sbjct: 324 KAGSSAVLPPG----VYTLQDLRAFGTKKGWCPYFLARHMVQFANVVVYSYQYLLDPKVA 379
Query: 276 GAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDV-------LLKLQMELEQVCSVNP 327
+ ++ + ++++ DEAHNI+++ +A SV + L K++ E+E+ +
Sbjct: 380 SIISKEMQRESVVVFDEAHNIDNVCIEALSVSVRRQTIEGARRNLNKMRQEIERFKETD- 438
Query: 328 MIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRE--LQEA---NISR-QC 381
L R LA+R W + AL + L+EA NI R +
Sbjct: 439 ---------AGRLRAEYNRLVEGLAQRGNLPISDTWLSNPALPDDILKEAVPGNIRRAEH 489
Query: 382 FPILLECATKAIKEATDTES-----------ELPHLSGMSVITLEGLFSSLTY------- 423
F +L + ++ DTE+ + +G+ TL+ + L
Sbjct: 490 FIHVLRRLVQYLEGRLDTENVEKEGLVTFVGSIGSQAGIDQKTLKFCYDRLHSLMLTLEI 549
Query: 424 --------------FFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVF 469
F + G++ + + ++ +R P L L C + ++
Sbjct: 550 TDTDEFLHVQTICDFATLVGTYARGFSIIIEPVDERMPHIPDP----VLQLSCHDASLAI 605
Query: 470 KDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQ-VLTSVISTGPDNY 528
K V E S+++TSGTLSP++ + L F + + + + V++ G D
Sbjct: 606 KPVFERFQSVVITSGTLSPIDLYPRLL--NFNPVVSRSFTMSLTRDCICPMVLTRGSDQL 663
Query: 529 PLNASY---------------------KTADG-------YKLMEKLCNRWRETGQWSRLN 560
P++ + DG Y M+ + N W ETG +
Sbjct: 664 PVSTKFDMRSDLGVVRNYGRLLLEMVSAVPDGIVCFFVSYSYMDGIINSWNETGILKEIM 723
Query: 561 AKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENAN 620
K +F+E +Q+ E L ++ + C
Sbjct: 724 QHKLVFIE----TQDVVETTLA--LDNYRKACDCG------------------------- 752
Query: 621 KKGASFLAVCRGKIVVGIPFP-NINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQ----- 674
+GA F +V RGK+ GI F + + + + Y SK LL+ E+
Sbjct: 753 -RGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQ--YTLSKILLARLEYLRETFQIKE 809
Query: 675 ----AFRALNQA---IGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYD--- 724
F AL QA +GR IR + DYG +I D+R+ R+ + W+ ++
Sbjct: 810 GDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNL 869
Query: 725 SFDASLEGLKSFFR------DVKGWVGKK 747
S D +L + F R D G G+K
Sbjct: 870 STDMALHIAREFLRKMAQPYDKAGSSGRK 898
>gi|403416279|emb|CCM02979.1| predicted protein [Fibroporia radiculosa]
Length = 876
Score = 94.0 bits (232), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 148/359 (41%), Gaps = 86/359 (23%)
Query: 463 LNPAVVFKDVAELSLSIILTSGTLSP-------------MNSFSSELGVQFGTCLEAPHV 509
LNP+ F+DV +++ SIIL GT+SP +N S+L + H+
Sbjct: 525 LNPSTHFQDVIDVARSIILAGGTMSPANNPSRLMKIPDIINQLFSKLPNERIATFSCGHI 584
Query: 510 ID-VDLQVLTSVISTGPDNYPLNASYKTAD----------------------------GY 540
I +LQ L V+ GP L Y+ Y
Sbjct: 585 IPPSNLQTL--VLKKGPRGSELTFKYEQRSDRAMILELGQILLNFSNLVPGGMVVFLPSY 642
Query: 541 KLMEKLCNRWRETGQWSRLNAKKPL---------------------FVEPKGGSQEDFEI 579
+ + W +G ++L AKK + F+EP+ SQ E
Sbjct: 643 SFLNVVKTAWEGSGLMNKLKAKKKVVSLDSRKIEPICNDNCPMRQVFLEPQDSSQ--VET 700
Query: 580 VLKHYYNSISQGSKCAVVRKKRVKREGNNDL--NTIESQENANKKGASFLA-VCRGKIVV 636
VL+ Y +I G+ + K K + L I ++ + +G +F + R +++
Sbjct: 701 VLRDYAAAIHDGAGVSRDEKGPTKSKTTGALLFAVIGAKLS---EGLNFTDDLARAVVII 757
Query: 637 GIPFPN------------INDIQVSLKKKYNDTYR-SSKNLLSGNEWYCNQAFRALNQAI 683
G+PF N +N +Q + +K ++ +S + E Y N A+NQ+I
Sbjct: 758 GLPFANLASPELRERMEYVNRMQKQVSEKLGSAWKMTSGTKDAATELYENMCMNAVNQSI 817
Query: 684 GRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFRDVKG 742
GR IRHR D+ ++IL+D R+ R R + KW+ + D F +++ + F+R+ +G
Sbjct: 818 GRAIRHRGDWASLILVDSRYTLPRIREKLPKWIGQGTLVTDGFGQAIKEMARFYREKRG 876
Score = 67.4 bits (163), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 94/215 (43%), Gaps = 62/215 (28%)
Query: 142 MTPTIFYASRTHSQISQVISEYKKTAYRV----------PMAV----------------- 174
M I+YASRTHSQ++Q++ E +K ++ P+A+
Sbjct: 112 MCTKIYYASRTHSQLAQILHELRKLRIQLNLSLSSHSEYPLALPGVSDPARAKRSVSDID 171
Query: 175 ---------------LASRKHYCTNKYVRDKE-NIDEECKLLLGDRN-LGCPQFKNVHK- 216
L SRK C ++ +R + ++DE C+ +LG++ CP V
Sbjct: 172 DDDDPQTAGTARTVSLGSRKQLCIHEELRRRTGDLDEACRQMLGEKGKQRCPHLPGVDDE 231
Query: 217 -----------VRGHPSLQKGGCHEV------HDIEDLVNVGQVVRGCSYYAARSMADDA 259
V P++ + + DIEDLV GQ + C Y+ +R A
Sbjct: 232 VRMLDLRDQILVSVSPAVLQVSDRSIAVKATPKDIEDLVVAGQNMETCPYFGSRRAIPQA 291
Query: 260 QLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHN 294
QLV PY+ ++ R A+ +D+K ++I+DEAHN
Sbjct: 292 QLVLLPYNLLLQKTAREAIGIDLKDQVIIIDEAHN 326
>gi|357134709|ref|XP_003568958.1| PREDICTED: DNA repair helicase UVH6-like [Brachypodium distachyon]
Length = 758
Score = 94.0 bits (232), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 149/756 (19%), Positives = 279/756 (36%), Gaps = 188/756 (24%)
Query: 122 PSTNGQTAQVA--MNNKNVKKKMTPT-IFYASRTHSQISQVISEYKKTAYRVPMAV---- 174
P+ G+TA + + + ++ P + Y +RT ++ + ++E + +P A
Sbjct: 43 PTGTGKTAALISLITSYSLTNPSRPLRLLYCTRTVHEMEKTLAELRLLFSHLPPAAARSL 102
Query: 175 ----LASRKHYCTNKYVRD---KENIDEECKLLLG-----------DRNLGCPQFKNVHK 216
L+SRK+ C + ++++D C+ L D C F++ +
Sbjct: 103 LALGLSSRKNLCVHPQASASAARDSVDTACRRLTASWVRDKAASDPDSTPLCDFFESFDR 162
Query: 217 VRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRG 276
L V+ + DL ++G+ R C YY AR M A +V Y Y+++P +
Sbjct: 163 AAAAGDLASYMPPGVYTLADLRSLGRERRICPYYLARQMVKYANVVVYSYQYLLDPKVAS 222
Query: 277 AMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQVCSVNPMIYQPLIE 335
+ ++ K +++ DEAHNI+++ +A SV I + L + L ++
Sbjct: 223 IVSREMQKECVVVFDEAHNIDNVCIEALSVSIRKQTLEGAERNLRRI------------- 269
Query: 336 MTQDLVGWIERRKAT---------------LAKREFQHFFSCWTG-----DKALRELQEA 375
+Q+ I+R KAT LA+R W D L+E
Sbjct: 270 -SQE----IDRFKATDANRLRAEYNRLVDGLAQRGNLPISDAWLANPSLPDDILKEAVPG 324
Query: 376 NISR-QCFPILLECATKAIK---EATDTESELPHLSGMSVITLEGL-------------- 417
NI R + F +L+ + + E + E+E+P S+ + G+
Sbjct: 325 NIRRAEHFLAVLKRLVRFLDGRLETENVENEMPVSFVASIHSQAGIDQRMLRFCYDRLQS 384
Query: 418 ---------------FSSLTYFFSRNGSHVSDYQLALQKYIKR--DSKNPGGNWTHTLSL 460
++ F + G++ + + ++ Y R + ++P + L
Sbjct: 385 LLLTLEITDTDEFMHIQTICDFATLIGTYTRGFSIIIEPYDDRMPEIRDP------VIQL 438
Query: 461 WCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQ-VLTS 519
C + ++ + V + ++++TSGTLSP++ + L F + + + +
Sbjct: 439 SCHDASLAIQPVFDRFQTVVITSGTLSPIDLYPRLL--NFNPVISRSFTMSLTRDCICPM 496
Query: 520 VISTGPDNYPLNASY---------------------KTADG-------YKLMEKLCNRWR 551
V++ G D P++ + DG Y M+ + N W
Sbjct: 497 VLTRGSDQLPVSTKFDMRSDPGVVRNYGRLLLEMASAVPDGIVCFFVSYSYMDGIVNNWN 556
Query: 552 ETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLN 611
E G + K +F+E + + L +Y + G
Sbjct: 557 EMGILQDIMQHKLVFIETPDVVET--TLALDNYRKACDCG-------------------- 594
Query: 612 TIESQENANKKGASFLAVCRGKIVVGIPFPN-----INDIQVSLKKKYNDTYRSSKNLL- 665
+GA F +V RGK+ GI F + V + + R+ L
Sbjct: 595 ----------RGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILRARLEYLR 644
Query: 666 -----SGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSI 720
++ A R Q +GR IR + DYG +I D+R+ R+ + W+ +
Sbjct: 645 ETFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHL 704
Query: 721 KQYD---SFDASLEGLKSFFR------DVKGWVGKK 747
S D +L + F R D G GKK
Sbjct: 705 HDAHLNLSTDMALHTAREFLRRMAQPYDKTGSGGKK 740
>gi|15220007|ref|NP_178107.1| chromosome transmission fidelity protein 1 [Arabidopsis thaliana]
gi|12324592|gb|AAG52253.1|AC011717_21 putative helicase; 55525-51977 [Arabidopsis thaliana]
gi|332198199|gb|AEE36320.1| chromosome transmission fidelity protein 1 [Arabidopsis thaliana]
Length = 882
Score = 94.0 bits (232), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 95/181 (52%), Gaps = 34/181 (18%)
Query: 146 IFYASRTHSQISQVISEYKKTAY--RVPMAVLASRKHYCTNKYVRDKEN---IDEECKLL 200
+F+ SRTHSQ+SQ + E +KT + ++ + L SRK+ C N+ V N I+E C L
Sbjct: 185 VFFCSRTHSQLSQFVKELRKTVFAKKLKVVCLGSRKNLCINEDVLKLGNVTRINERCLDL 244
Query: 201 LGDR--------NLG-------------CPQFKNVHKVRGH---PSLQKGGCHEVHDIED 236
+ NLG CP + HK++ S Q+ E DIED
Sbjct: 245 QKKKISQVSKKKNLGANVRIVRTKASCRCPMLRK-HKLQREFKAESFQQ----EAMDIED 299
Query: 237 LVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIE 296
LV +G+ +R C YY +R MA A LV PY +++ R ++ + +K +++I+DEAHN+
Sbjct: 300 LVQLGREMRTCPYYGSRRMAPAADLVILPYQSLLSKSSRESLGLSLKNSVVIIDEAHNLA 359
Query: 297 D 297
D
Sbjct: 360 D 360
Score = 73.6 bits (179), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 76/327 (23%), Positives = 138/327 (42%), Gaps = 91/327 (27%)
Query: 463 LNPAVVFKDVAELSLSIILTSGTLSPMNSFSSEL-------GVQFGTCLEAPHVIDVDLQ 515
L A +F +V + + ++IL GTL P+ L +QF +C H++ +
Sbjct: 544 LTGAKLFSEVVDEAHAVILAGGTLQPIEETRERLFPWLPSNQLQFFSC---SHIVPPE-S 599
Query: 516 VLTSVISTGPDNYPLNASYKTADGYKLMEKLC---------------------------- 547
++ +S GP + S+ + ++++L
Sbjct: 600 IMPIAVSHGPSGQSFDFSHSSRSSIGMIQELGLLMSNLVAVVPEGIIVFFSSFEYETQVH 659
Query: 548 NRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSIS--QGSKCAVVRKKRVKRE 605
W +G R+ KK +F EP+ ++ E VL+ Y +I +G+ V +V E
Sbjct: 660 TAWSNSGILRRIVKKKRVFREPRKNTE--VEAVLRDYKEAIESERGAIMLAVVGGKVS-E 716
Query: 606 GNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKY------NDTYR 659
G N +++ CR ++VG+P+P+ +DI++ + K+ +D+ +
Sbjct: 717 GINFSDSM----------------CRCVVMVGLPYPSPSDIELLERIKHIEGRADSDSIK 760
Query: 660 SSKNLLS---------------------GNEWYCNQAFRALNQAIGRCIRHRFDYGAIIL 698
S L+ G E+Y N +A+NQ+IGR IRH DY +I+L
Sbjct: 761 PSVTLVDDSYYSGDVQAGFGVLKSCKRRGKEYYENLCMKAVNQSIGRAIRHEKDYASILL 820
Query: 699 LDERFQEERNR----AHISKWLRKSIK 721
+D R+ + ++ +H S L K IK
Sbjct: 821 VDARYSNDPSKRTSHSHPSNKLPKWIK 847
Score = 56.6 bits (135), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 37/59 (62%), Gaps = 5/59 (8%)
Query: 27 FPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCKLK 85
FPY+PY Q+ FM + LD+ ++LESPTGTGKSLS++CS L W + K K
Sbjct: 10 FPYKPYSIQIDFMNALYQFLDKGGV-----SMLESPTGTGKSLSIICSALQWLTDRKEK 63
>gi|44889982|emb|CAF32100.1| DNA repair helicase, putative [Aspergillus fumigatus]
Length = 767
Score = 93.6 bits (231), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 154/685 (22%), Positives = 277/685 (40%), Gaps = 153/685 (22%)
Query: 146 IFYASRTHSQISQVISEYK--------KTAYRVPMAVLA--SRKHYCTNKYVRDKEN--- 192
+ Y SRT S+I + ++E K + Y L SRK+ C + V+ +++
Sbjct: 69 LIYCSRTMSEIEKALAELKELMKFRSQQLGYTEDFRALGLTSRKNLCLHPSVKREKSGTV 128
Query: 193 IDEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAA 252
+D C+ L F K RG ++ HEV V+R
Sbjct: 129 VDARCRSLTAG-------FVKEKKERGE-DVELCIYHEV--------CADVLRKLW---- 168
Query: 253 RSMADDAQLVFC-----PYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVD 306
Q+ +C Y Y+++P I + ++ K I++ DEAHNI+++ +A S+D
Sbjct: 169 ------VQMPYCNVIIYSYHYLLDPKIAERVSRELSKDCIVVFDEAHNIDNVCIEALSID 222
Query: 307 IDEDVLLK-------LQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHF 359
I ED L K L+ ++ ++ S + Q E ++ + G R+A A+ E Q
Sbjct: 223 ITEDSLRKATRGANNLERKISEMKSSDAEKLQN--EYSKLVEGL---REAEQARDEDQFI 277
Query: 360 FSCWTGDKALRELQEANISR-QCFPILLECATKAIK---EATDTESELP-----HLSGMS 410
+ D L+E NI R + F L+ + +K + T T SE P H+ ++
Sbjct: 278 ANPVLPDDLLKEAVPGNIRRAEHFVAFLKRFIEYLKTRMKVTHTISETPPSFLTHVKDLT 337
Query: 411 VI-----------------TLEGL-------FSSLTYFFSRNGSHVSDYQLALQKYIKRD 446
I TLE + + F + ++ + L L+ +
Sbjct: 338 FIERKPLRFCAERLTSLVRTLELINIEDYQPLQEVATFATLVSTYDKGFLLILEPFESET 397
Query: 447 SKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEA 506
+ P L CL+ A+ K V + S+I+TSGTLSP+ + LG F T L+
Sbjct: 398 ATVPNP----VLHFTCLDAAIAIKPVFDRFSSVIITSGTLSPLEMYPKMLG--FPTVLQE 451
Query: 507 PHVIDVDLQ-VLTSVISTGPDNYPLNASYK---------------------TADG----- 539
+ + + + L +++ G D +++S++ T DG
Sbjct: 452 SYTMTLARRSFLPMIVTRGSDQAQISSSFQIRNDPGVVRNYGNIVLEFSRITPDGIVVFF 511
Query: 540 --YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVV 597
Y ME + + W+ G + K + VE + + L+ Y + G +
Sbjct: 512 PSYLYMESIISMWQGMGILDSIWNYKLILVETPDAQESS--LALETYRTACCNGRGAILF 569
Query: 598 RKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKY-ND 656
R K D + + G R + +G+PF + + ++ +
Sbjct: 570 CVARGKVSEGIDFD--------HHYG-------RAVLCIGVPFQYTESRILKARLEFLRE 614
Query: 657 TYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWL 716
YR + N++ A R Q +GR +R + DYG ++L D RFQ++RN+ + KW+
Sbjct: 615 NYR-----IRENDFLSFDAMRHAAQCLGRVLRGKDDYGIMVLADRRFQKKRNQ--LPKWI 667
Query: 717 RKSIKQYD---SFDASLEGLKSFFR 738
+++ + + S D ++ K+F R
Sbjct: 668 SQAMLESETNLSTDMAVATAKNFLR 692
Score = 49.7 bits (117), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 44/78 (56%), Gaps = 6/78 (7%)
Query: 23 IQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQN 81
+ V FPY + Y Q +MC + TLD GHC +LE P+GTGK++SLL +A+QQ+
Sbjct: 8 LPVLFPYPRIYPEQYAYMCDLKKTLDAG---GHC--VLEMPSGTGKTVSLLSLIIAYQQH 62
Query: 82 CKLKNQLANISHSKPDTE 99
+L S + + E
Sbjct: 63 YPEHRKLIYCSRTMSEIE 80
>gi|345563336|gb|EGX46339.1| hypothetical protein AOL_s00110g163 [Arthrobotrys oligospora ATCC
24927]
Length = 920
Score = 93.6 bits (231), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 139/341 (40%), Gaps = 82/341 (24%)
Query: 463 LNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGT----CLEAPHVIDVDLQVLT 518
L+P FKD+ E + +++L GT+ PM+ + + L + + HVI D +L
Sbjct: 595 LDPTHHFKDLVEDARAVVLAGGTMEPMSDYVNHLFPYLPSERLRMVSCGHVIPQD-NMLA 653
Query: 519 SVISTGPDNYPLNASYKTADGYKL----------------------------MEKLCNRW 550
+ G N +++ +G KL +E + W
Sbjct: 654 MTVPMGVTNQAFEFTFEKRNGPKLITELGKTIFNLCKVIPHGVVVFFPSYAYLETVVKVW 713
Query: 551 RETGQ------WSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKR 604
E G + L ++K +F E KG S E +L+ Y ++ +G K A++ +
Sbjct: 714 EEKGPEGTASIYENLQSRKAVFREAKGSSS--VEDILRDYAKAVDEG-KGALL----LSV 766
Query: 605 EGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYND---TYRSS 661
G I +N + RG I+VG+PFPNI+ + K ++ + RS
Sbjct: 767 VGGKMSEGINFSDN----------LGRGVIMVGLPFPNIHSAEWKAKLEFVEQSMITRSE 816
Query: 662 KNLLSGNE----------------WYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQE 705
+ G +Y N RA+NQ+IGR IRHR DY I+LLD+RF
Sbjct: 817 SAVAEGTSLDATKLQQEAKAAAQGYYENACMRAVNQSIGRAIRHRNDYAVILLLDKRFSR 876
Query: 706 ERNRAHISKWLRKSIKQYDS-------FDASLEGLKSFFRD 739
+ + KW+R + F + G+ FFR+
Sbjct: 877 DNIWGKLPKWIRDGTSGVAAGKAGEVKFGMVMTGVGKFFRN 917
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 88/201 (43%), Gaps = 51/201 (25%)
Query: 146 IFYASRTHSQISQVISEYKKT----AYR--------------VPMAVLASRKHYCTNKYV 187
IFY SRTHSQ+SQ +E ++ Y V L SRK C N V
Sbjct: 225 IFYCSRTHSQLSQFTAELRRVHLPPTYEDDLTEESEEKPEEVVKHLSLGSRKLLCINDKV 284
Query: 188 -----------------RDKENIDEECKLLL----GDRNLGCPQFKNVHKVRGHPSLQKG 226
+ ++ + +C LL RN+ +F+++
Sbjct: 285 NTPSASANTVNDRCLDLQQSKSAENKCPFLLPKADNQRNVLNREFRDL------------ 332
Query: 227 GCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAI 286
++ DIEDL VG+ ++ C YYA+R +++ PY ++ R A+++ +K I
Sbjct: 333 ALADIKDIEDLRGVGEKLKICGYYASREAIKPTEIITLPYPLLLQKSSREALKISVKNHI 392
Query: 287 LILDEAHNIEDIARDAGSVDI 307
+I+DEAHN+ D + SV I
Sbjct: 393 IIIDEAHNLMDAVSNIHSVSI 413
>gi|348564458|ref|XP_003468022.1| PREDICTED: probable ATP-dependent RNA helicase DDX11-like [Cavia
porcellus]
Length = 424
Score = 93.6 bits (231), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 136/333 (40%), Gaps = 73/333 (21%)
Query: 457 TLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLE------APHVI 510
+L LNPAV F V E ++++ GT+ P++ F +L GT E VI
Sbjct: 116 SLKFLLLNPAVQFAQVMEECRAVVIVGGTMQPVSDFREQLLTWAGTQSERVVEFSCGRVI 175
Query: 511 DVDLQVLTSVISTGPDNYPLNASYKTADGYKLMEK----LCN------------------ 548
D +L V+ + P + L +++ ++E+ LCN
Sbjct: 176 PPD-NILPLVLCSRPTSQQLEFTFQQRKLPAMLEETGRILCNLCNVIPGQLVCFFPSYEY 234
Query: 549 ------RWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRV 602
W ++G +RL +K LF EPK SQ E VL Y SKC +
Sbjct: 235 QRQVLGHWDKSGLLARLTVRKKLFQEPKRASQ--VEQVLAAY-------SKC-------I 278
Query: 603 KREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFP-----------NINDIQVSLK 651
+R G Q GA L+V GK+ GI F NI ++ K
Sbjct: 279 QRCG---------QAGGPLTGALLLSVVGGKMSEGINFADDLGRCMVMVGNIQSPELQEK 329
Query: 652 KKYNDTY--RSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNR 709
Y D + RS + G N +A+NQ+I IRH+ D+ +I+LLD+ +
Sbjct: 330 MAYLDQHLPRSPGQVPPGKALLENLCMKAVNQSISEAIRHQRDFASIVLLDQHYTRPPVL 389
Query: 710 AHISKWLRKSIKQYDSFDASLEGLKSFFRDVKG 742
A + W+R +K +F A L+ F ++ G
Sbjct: 390 AKLPAWIRDCVKIKATFGAQFLALRKFHKEKAG 422
>gi|226496439|ref|NP_001152321.1| DNA repair helicase UVH6 [Zea mays]
gi|195655087|gb|ACG47011.1| DNA repair helicase UVH6 [Zea mays]
gi|413917667|gb|AFW57599.1| DNA repair helicase UVH6 [Zea mays]
Length = 758
Score = 93.6 bits (231), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 154/768 (20%), Positives = 285/768 (37%), Gaps = 192/768 (25%)
Query: 122 PSTNGQTAQVA--MNNKNVKKKMTPT-IFYASRTHSQISQVISEYKKTAYRVPMAV---- 174
P+ G+TA + + + ++ P + Y +RT ++ + ++E + +P A
Sbjct: 43 PTGTGKTAALISLITSYSLANPARPLRLIYCTRTVHEMEKTLAELRLLFAHLPPAASRSL 102
Query: 175 ----LASRKHYCTN---KYVRDKENIDEECKLLLG-----------DRNLGCPQFKNVHK 216
L+SRK+ C + ++++D C+ L D C ++ +
Sbjct: 103 LALGLSSRKNLCIHPQASAAAARDSVDTACRRLTASWVREKASSDPDSTPLCEFYETFDR 162
Query: 217 VRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRG 276
L V+ + DL +G+ R C Y+ AR M A +V Y Y+++P +
Sbjct: 163 AAAAGDLASFMPPGVYTLADLRALGRERRVCPYFLARQMVKYANVVVYSYQYLLDPKVAS 222
Query: 277 AMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQVCSVNPMIYQPLIE 335
+ ++ K +++ DEAHNI+++ +A SV I + L + L ++
Sbjct: 223 IVSREMQKECVVVFDEAHNIDNVCIEALSVSIRKQTLEGAERNLRRI------------- 269
Query: 336 MTQDLVGWIERRKAT---------------LAKREFQHFFSCWTG-----DKALRELQEA 375
+Q+ I+R KAT LA+R W D L+E
Sbjct: 270 -SQE----IDRFKATDANRLRAEYNRLVDGLAQRGNLPISDAWLANPSLPDDILKEAVPG 324
Query: 376 NISR-QCFPILLECATKAIK---EATDTESELPHLSGMSVITLEGL-------------- 417
NI R + F +L + + E + E+E+P S+ + G+
Sbjct: 325 NIRRAEHFLAVLRRLVRFLDGRLETENVENEMPVSFVASIHSQAGIDQKMLRFCYDRLHS 384
Query: 418 ---------------FSSLTYFFSRNGSHVSDYQLALQKYIKR--DSKNPGGNWTHTLSL 460
++ F + G++ + + ++ Y R D ++P + L
Sbjct: 385 LMMTLEITDTDEFMHIQTICDFATLIGTYTRGFSIIIEPYDDRMPDIRDP------VIQL 438
Query: 461 WCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQ-VLTS 519
C + ++ + V + ++++TSGTLSP++ + L F + + + +
Sbjct: 439 SCHDASLAIRPVFDRFETVVITSGTLSPIDLYPRLL--NFNPVISRSFTMSLTRDCICPM 496
Query: 520 VISTGPDNYPLNASY---------------------KTADG-------YKLMEKLCNRWR 551
V++ G D P++ + DG Y M+ + N W
Sbjct: 497 VLTRGSDQLPVSTKFDMRSDPGVVRNYGRLLLEMASAVPDGIVCFFVSYSYMDGIVNSWH 556
Query: 552 ETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLN 611
E G + K +F+E + + L +Y + G
Sbjct: 557 EMGILQDIMQHKLVFIETPDVVET--TLALDNYRKACDCG-------------------- 594
Query: 612 TIESQENANKKGASFLAVCRGKIVVGIPFP-NINDIQVSLKKKYNDTYRSSKNLLSGNEW 670
+GA F +V RGK+ GI F + + + + Y S+ LL+ E+
Sbjct: 595 ----------RGAIFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQ--YTLSRILLARLEY 642
Query: 671 YCNQ---------AFRALNQA---IGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRK 718
F AL QA +GR IR + DYG +I D+R+ R+ + W+
Sbjct: 643 LRETFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILS 702
Query: 719 SIKQYD---SFDASLEGLKSFFR------DVKGWVGKKMFNGLENSDN 757
+ S D +L + F R D G GKK E+ +N
Sbjct: 703 HLHDAHLNLSTDMALHIAREFLRRMAQPYDKAGSGGKKTLLTEEDLEN 750
>gi|346975762|gb|EGY19214.1| fanconi anemia group J protein [Verticillium dahliae VdLs.17]
Length = 838
Score = 93.6 bits (231), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 148/355 (41%), Gaps = 71/355 (20%)
Query: 448 KNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFG----TC 503
K PG LS L+P F +A + ++IL GT+SP + + + L T
Sbjct: 494 KLPGAAPDIQLSYLLLSPTHAFSSIATSARAVILAGGTMSPFDDYRAHLFPYLPEPKLTT 553
Query: 504 LEAPHVI---DVDLQVLTSVISTGPDN--------------------YPLNASYKTADG- 539
L HVI ++ ++ L + + P++ LN DG
Sbjct: 554 LRCGHVIPPSNLCVRTLAASRAGDPNSTFEFSFQRRSDKAMVNQLGLAILNMCAVVPDGI 613
Query: 540 ------YKLMEKLCNRWRETGQ------WSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNS 587
Y ++++ W T W+R+ +K +F E KG S E+ VL Y +
Sbjct: 614 VVFFPSYGYLDEVVAAWETTAAGESTPIWTRMQQRKAVFKESKGASSEE---VLALYSEA 670
Query: 588 ISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFL-AVCRGKIVVGIPFPNINDI 646
I G + K R G L+ + + + +G +F + R +VVG+P+PN++
Sbjct: 671 I-LGDGTSDAPKPR----GALLLSVVGGKMS---EGINFSDRLGRAVMVVGLPYPNMHSP 722
Query: 647 QVSLKKKYNDTYRSSKNL----------------LSGNEWYCNQAFRALNQAIGRCIRHR 690
+ K +Y + + L + ++Y N RA+NQ+IGR IRHR
Sbjct: 723 EWKAKTEYVEMTVLKRALEAEPGVDRAKAQAAAKQAARDFYENACMRAVNQSIGRAIRHR 782
Query: 691 FDYGAIILLDERFQEERNRAHISKWLRKSIK---QYDSFDASLEGLKSFFRDVKG 742
DY AIIL D R+ ER + + W++ I+ Q + L FFR +G
Sbjct: 783 GDYAAIILCDRRYGTERIKGKLPGWIQGGIQGDGQESGLPQLMGALSGFFRGKRG 837
Score = 63.2 bits (152), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 64/127 (50%), Gaps = 4/127 (3%)
Query: 175 LASRKHYCTNKYV---RDKENIDEECKLLLGDRNLG-CPQFKNVHKVRGHPSLQKGGCHE 230
L+SR+ C N V + + I++ C L ++ CP + +
Sbjct: 240 LSSRQKLCINPAVSRLKTQSAINDRCAELQQPKSKNKCPYVPKEENLNKTHQFRDTAHAT 299
Query: 231 VHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILD 290
+ DIEDL ++G+ + C YYA+R+ +++ PY ++ R A+ + ++G I+I+D
Sbjct: 300 LPDIEDLFHLGKSLEVCPYYASRTAIAGTEIITLPYPLLLQKTAREALGIKLEGNIVIVD 359
Query: 291 EAHNIED 297
EAHNI D
Sbjct: 360 EAHNIMD 366
Score = 53.5 bits (127), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 23 IQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNC 82
I PY PY Q FM L +G +LESPTGTGKSLSL+C+ L W +N
Sbjct: 8 IDFHHPYTPYDVQTQFMTEAYKVLQTG--NGQI-GILESPTGTGKSLSLICAALTWLRNH 64
Query: 83 K 83
K
Sbjct: 65 K 65
>gi|290991586|ref|XP_002678416.1| DEAD/DEAH box helicase [Naegleria gruberi]
gi|284092028|gb|EFC45672.1| DEAD/DEAH box helicase [Naegleria gruberi]
Length = 902
Score = 93.2 bits (230), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 144/328 (43%), Gaps = 70/328 (21%)
Query: 458 LSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQV- 516
+ LNP+V F+ + + + S+ILT GT+ P+ ++ + T H+ D +
Sbjct: 573 IKFLLLNPSVYFQSILKEARSVILTGGTMEPIQQLIQQVFPK--TESSKIHIYQCDKHIV 630
Query: 517 -----LTSVISTGPDNYPLNASYK--------TADGYKLMEKLCN--------------- 548
L +S G D+ L+ ++K T K++ LCN
Sbjct: 631 PQNHFLPIALSKGVDDIVLDFTFKNRQKNDALTKSLGKMIVNLCNIVPDGVVLFFPSYQY 690
Query: 549 ------RWRETGQWSRLNAKKPLFVEPKGGSQ---------EDFEIVLKHYY-NSISQGS 592
W+ G ++ KK E + ++++ ++ H + NS GS
Sbjct: 691 EKTVFEYWKNNGIIGQIEKKKKFLREASTNEEPNSSLEKILQEYKKIIDHNFGNSRYNGS 750
Query: 593 KCAVVRKKRVKREGNNDLNTIESQENANKKGASFL-AVCRGKIVVGIPFPNINDIQVSLK 651
+ V ++ +G +F R IVVG+P+PN D ++ +
Sbjct: 751 VLSCVVGGKL------------------SEGINFSDGYGRLIIVVGMPYPNTTDPELVEQ 792
Query: 652 KKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAH 711
+ + + +++K +S E+ N +NQ+IGR IRH DY ++LLD+R+ + R
Sbjct: 793 QNFFE--KTTK--VSKGEYLDNLCMNGVNQSIGRAIRHSKDYATVLLLDKRYHQSRLTNK 848
Query: 712 ISKWLRKSIKQYDSFDASLEGLKSFFRD 739
+SKW+RK ++ DSF S+ ++ FF++
Sbjct: 849 LSKWIRKGVQIQDSFGKSVNSIEQFFKE 876
Score = 90.1 bits (222), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 102/181 (56%), Gaps = 24/181 (13%)
Query: 143 TPTIFYASRTHSQISQVISEYKKTAY--RVPMAVLASRKHYCTNKYV--RDKEN------ 192
TP I Y SRTHSQ++Q + E +KT + +V ++ +ASR+ C N+ V R +N
Sbjct: 239 TPKIIYCSRTHSQLNQFVQELRKTEFSKKVRVSNIASRQVLCNNEDVLYRKTKNGNIQNS 298
Query: 193 ---IDEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCH-EVHDIEDLVNVGQVVRGCS 248
I+E+C+ L R+ + N PSL K +VHDIEDL+++G+ ++ CS
Sbjct: 299 LNAINEKCQYL---RDKKACSYDN------DPSLFKDHMTVKVHDIEDLLDLGKRLKICS 349
Query: 249 YYAARSMADDAQLVFCPYSYIINPVIRGAMEVD-IKGAILILDEAHNIEDIARDAGSVDI 307
Y+ R ++L+ PY+ +I+ R ++ + +K ++I+DEAHN+ + SV++
Sbjct: 350 YFGTRKALPISELICMPYNSLIHEQTRKSLGISTLKDCVVIIDEAHNLINAIHQMHSVEL 409
Query: 308 D 308
D
Sbjct: 410 D 410
Score = 47.0 bits (110), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 6/53 (11%)
Query: 27 FPYQ-PYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
FPY+ PY Q +M ++ T+ + + ESPTG+GKSLSL+C L+W
Sbjct: 46 FPYEKPYDIQQQYMEQLFDTIQSGKV-----GIFESPTGSGKSLSLICGALSW 93
>gi|95007442|emb|CAJ20663.1| DNA repair helicase, putative [Toxoplasma gondii RH]
Length = 1250
Score = 93.2 bits (230), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 142/345 (41%), Gaps = 74/345 (21%)
Query: 458 LSLWCLNPAVVFKDVA-ELSLSIILTSGTLSPMNSFSSELG----VQFGTCLEAPHVIDV 512
L+ W ++PA F + + + SII TSGTL+P+ + LG ++F LE HV+
Sbjct: 381 LAFWSMSPAPAFASLLLQGARSIICTSGTLAPLLPLAQRLGTPGRLKFSIFLENDHVVGP 440
Query: 513 DLQVLTSVIST--------------GPDNYPLNASYKTADG---------YKLMEKLCNR 549
Q+ +V+S G + + + D YK ++ +
Sbjct: 441 S-QLFATVLSQVNLSAAAVASGLLGGGEETSAESDTRQNDSRRVWNDFRSYKDLQFYHRQ 499
Query: 550 WRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNND 609
G ++ A P E +L + S+ + + A R R G
Sbjct: 500 LDREGTDAKAEAASPPAYVEDATKDSQMETLLSTFQRSVQEAVE-ADASSSRDARGGTGH 558
Query: 610 LNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKKY 654
L K GA LAVC+GK ++ G+P + + +V LK+ +
Sbjct: 559 LG-------GTKTGAVLLAVCKGKAAEGIDFSDHACRAVVICGLPLASFFEPRVQLKRMW 611
Query: 655 ND---------TYRSSKN------------LLSGNEWYCNQAFRALNQAIGRCIRHRFDY 693
D T +S+ L++G +WY +A RA+NQA+GR +RH D+
Sbjct: 612 LDDCMQKLVAETGGASRGKEQGTGETTAPVLINGRQWYDQEARRAVNQAVGRVVRHAKDF 671
Query: 694 GAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
G ++ LD+RF + + +W+R+S+ + A LE L S R
Sbjct: 672 GVVVFLDKRFSSPDLQKDLPRWVRRSL-ELPPASAPLEFLASRVR 715
Score = 58.2 bits (139), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 72/149 (48%), Gaps = 13/149 (8%)
Query: 169 RVPMAVLASRKHYCTNKYVRDKEN--IDEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKG 226
++ +AVL SR + C + + ++ CK L R GC + + + + +
Sbjct: 4 KMKVAVLGSRDNLCVHAVSQKLRGGALNAACKKKL--RGEGCKFYSSSVREKEKIAQVLQ 61
Query: 227 GCHEVHDIEDLVNVG--------QVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAM 278
C + D+EDL + V+ C +Y R + + LV PY+Y+++P +
Sbjct: 62 ACGPM-DVEDLKACATGCSPPGVEKVQFCPFYTMRDYQEKSDLVLLPYNYLLDPSSQLLK 120
Query: 279 EVDIKGAILILDEAHNIEDIARDAGSVDI 307
+ +ILI+DEAHN+E +A DA S ++
Sbjct: 121 PGSLANSILIIDEAHNVEQVAEDASSFEL 149
>gi|302418904|ref|XP_003007283.1| DNA repair helicase RAD3 [Verticillium albo-atrum VaMs.102]
gi|261354885|gb|EEY17313.1| DNA repair helicase RAD3 [Verticillium albo-atrum VaMs.102]
Length = 756
Score = 93.2 bits (230), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 156/709 (22%), Positives = 284/709 (40%), Gaps = 163/709 (22%)
Query: 146 IFYASRTHSQISQVISEYKK-TAYRVPMAV---------LASRKHYCTNKYVRDKEN--- 192
+ Y SRT S+I + ++E ++ YR L SRK+ C + V+ +++
Sbjct: 28 LIYCSRTMSEIEKALAELRELMKYRTEQLGQEEEFRGLGLTSRKNLCLHPSVKREKSGSV 87
Query: 193 IDEECKLLL----------GDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQ 242
+D C+ L G+ C N+ + H + G V + L+ G+
Sbjct: 88 VDARCRSLTAGFVKEKKDKGENVDVCVYHDNLDLLEPHNLIPNG----VWTFDGLLRYGE 143
Query: 243 VVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIE----- 296
+ C Y+ +R M ++ Y Y+++P I + ++ K I++ DEAHNI+
Sbjct: 144 QHKQCPYFTSRRMMQYCNVIIYSYHYLLDPKIAERVSRELSKDCIVVFDEAHNIDNVCIE 203
Query: 297 ----DIARDA------GSVDIDEDVLLKLQMELEQVCSVNPMIYQPLIEMTQDLVGWIER 346
DI D+ G+ ++D + Q + EQ+ + Y L+E +D
Sbjct: 204 SLSTDITEDSLRKAARGAQNLDRKIAEMKQTDQEQLQNE----YLKLVEGLRD------- 252
Query: 347 RKATLAKRE--FQHFFSCWTGDKALRE--LQEA---NISR-QCFPILLECATKAIK---E 395
A A++E F + T KAL + L EA NI R + F L+ + +K +
Sbjct: 253 --AGEARQEDAFMSNPARLTDGKALPDDLLNEAVPGNIRRAEHFVAFLKRFIEYLKTRMK 310
Query: 396 ATDTESELP-----HLSGMSVITLEGL------FSSLTYFFSRNGSHVSDYQ-------- 436
+T SE P HL + I + L +SL + +++ DYQ
Sbjct: 311 VRNTISETPPSFLAHLKEFTFIEKKPLKFCAERLTSLVR--TLELTNIEDYQPLQEVATF 368
Query: 437 ------------LALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSG 484
L L+ + ++ P L CL+ A+ K V + S+I+TSG
Sbjct: 369 ATLVATYEKGFLLILEPFESEAAEVPNP----VLHFTCLDAAIAIKPVFDRFSSVIITSG 424
Query: 485 TLSPMNSFSSELGVQFGTCLEAPHVIDVDLQ-VLTSVISTGPDNYPLNASYK-------- 535
T+SP+ + LG F T ++ + + + + L +++ G D ++ S++
Sbjct: 425 TISPLEMYPKMLG--FSTVVQESYSMTLARRSFLPMIVTRGSDQASVSTSFQVRNEPSVV 482
Query: 536 -------------TADG-------YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQE 575
T DG Y ME + + W+ G + K + VE +
Sbjct: 483 RNYGSLLTEFAKITPDGMVVFFPSYLYMESIISMWQGMGILDEVWKYKLILVETPDAQET 542
Query: 576 DFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIV 635
+ L+ Y + G ++ R K D + ++ G R +
Sbjct: 543 S--LALETYRTACCNGRGAVLLCVARGKVSEGIDFD--------HQYG-------RAVLN 585
Query: 636 VGIPFPNINDIQVSLKKKY-NDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYG 694
+G+PF + + ++ +TYR + N++ A R Q +GR +R + DYG
Sbjct: 586 IGVPFQYTESRILKARLEFLRETYR-----IRENDFLSFDAMRHAAQCLGRVLRGKDDYG 640
Query: 695 AIILLDERFQEERNRAHISKWLRKSIKQYD---SFDASLEGLKSFFRDV 740
++L D RFQ + R + KW+ + + D S D ++ + F + +
Sbjct: 641 VMVLADRRFQ--KKRVQLPKWINQGLLDADTNLSTDMAVSSARRFLKQM 687
>gi|115462055|ref|NP_001054627.1| Os05g0144800 [Oryza sativa Japonica Group]
gi|51038192|gb|AAT93995.1| putative nucleotide excision repair protein XP-D [Oryza sativa
Japonica Group]
gi|113578178|dbj|BAF16541.1| Os05g0144800 [Oryza sativa Japonica Group]
gi|222630172|gb|EEE62304.1| hypothetical protein OsJ_17093 [Oryza sativa Japonica Group]
Length = 758
Score = 93.2 bits (230), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 147/716 (20%), Positives = 269/716 (37%), Gaps = 183/716 (25%)
Query: 146 IFYASRTHSQISQVISEYKKTAYRVPMAV--------LASRKHYCTN---KYVRDKENID 194
+ Y +RT ++ + ++E + +P A L+SRK+ C + ++++D
Sbjct: 70 LIYCTRTVHEMEKTLAELRLLFAHLPAAASRSLLALGLSSRKNLCVHPQASAAAARDSVD 129
Query: 195 EECKLLLG-----------DRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQV 243
C+ L D C F++ + L V+ + DL +G+
Sbjct: 130 TACRRLTASWVRDRAASDPDSTPLCDFFESFDRAAAAGDLASYMPPGVYTLADLRALGRD 189
Query: 244 VRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDA 302
C Y+ AR M A +V Y Y+I+P + + ++ K +++ DEAHNI+++ +A
Sbjct: 190 RGICPYFLARQMVKYANVVVYSYQYLIDPKVASIVSREMQKECVVVFDEAHNIDNVCIEA 249
Query: 303 GSVDIDEDVLLKLQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKAT------------ 350
SV I + L + L ++ +Q+ I+R KAT
Sbjct: 250 LSVSIRKQTLEGAERNLRRI--------------SQE----IDRFKATDANRLRAEYNRL 291
Query: 351 ---LAKREFQHFFSCWTGDKALRE--LQEA---NISR-QCFPILLECATKAIK---EATD 398
LA+R W + AL E L+EA NI R + F +L + + E +
Sbjct: 292 VDGLAQRGNLPISDAWLANPALPEDILKEAVPGNIRRAEHFLAVLRRLVRFLDGRLETEN 351
Query: 399 TESELPHLSGMSVITLEGL-----------------------------FSSLTYFFSRNG 429
E+E+P S+ + G+ ++ F + G
Sbjct: 352 VENEMPVAFVASIHSQAGIDQKMLRFCYDRLHSLMLTLEITDTDEFMHIQTICDFATLIG 411
Query: 430 SHVSDYQLALQKYIKR--DSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLS 487
++ + + ++ Y +R D ++P + L C + ++ + V E ++++TSGTLS
Sbjct: 412 TYTRGFSIIIEPYDERMPDIRDP------VIQLSCHDASLAIQPVFERFQTVVITSGTLS 465
Query: 488 PMNSFSSELGVQFGTCLEAPHVIDVDLQ-VLTSVISTGPDNYPLNASY------------ 534
P++ + L F + + + + V++ G D P++ +
Sbjct: 466 PIDLYPRLL--NFNPVISRSFTMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVVRNY 523
Query: 535 ---------KTADG-------YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFE 578
DG Y M+ + N W E G + K +F+E +
Sbjct: 524 GRLLLEMASAVPDGIVCFFVSYSYMDGIVNSWNEMGILQDIMQHKLVFIETPDVVET--T 581
Query: 579 IVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGI 638
+ L +Y + G +GA F +V RGK+ GI
Sbjct: 582 LALDNYRKACDCG------------------------------RGAIFFSVARGKVAEGI 611
Query: 639 PFP-NINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQ---------AFRALNQA---IGR 685
F + + + + Y S+ LL+ E+ F AL QA +GR
Sbjct: 612 DFDRHYGRLVIMFGVPFQ--YTLSRILLARLEYLRETFQIKEGDFLTFDALRQAAQCVGR 669
Query: 686 CIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYD---SFDASLEGLKSFFR 738
IR + DYG +I D+R+ R+ + W+ + S D +L + F R
Sbjct: 670 VIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLHDAHLNLSTDMALHIAREFLR 725
>gi|412986103|emb|CCO17303.1| predicted protein [Bathycoccus prasinos]
Length = 1048
Score = 93.2 bits (230), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 94/192 (48%), Gaps = 32/192 (16%)
Query: 146 IFYASRTHSQISQVISEYKKTAYR--VPMAVLASRKHYCTNKYVRD----KENIDEECKL 199
I + SRTHSQ+SQ +SE K+T +R V A +ASRK C N V + + I+E C
Sbjct: 288 IIFCSRTHSQLSQCVSELKRTRFRESVSSAAIASRKQLCVNPKVNNGLMSAQRINETCLD 347
Query: 200 L----------------------LGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDL 237
L + GCP V + + +L + DIE+L
Sbjct: 348 LRKSSASTSASTTKDKEKKKKKKGEKKEKGCPYL--VSRSKAMRALADRALVQPLDIEEL 405
Query: 238 VNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAM--EVDIKGAILILDEAHNI 295
++ + C+YYAAR + +A ++F PY+ ++ P R A+ E+D K ++I DEAHN+
Sbjct: 406 SSMATKTKSCAYYAARQASKNADIIFMPYASLLAPDTRDALGIELDPKNTVVIFDEAHNV 465
Query: 296 EDIARDAGSVDI 307
D R + S +
Sbjct: 466 ADAVRSSSSASM 477
Score = 70.5 bits (171), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 75/159 (47%), Gaps = 37/159 (23%)
Query: 617 ENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKKYNDTYR-- 659
E A+K GA L V GK IVVG+PF N+ D ++S + +Y D +
Sbjct: 881 ELASKTGAILLCVVNGKLSEGINFKDNLGRMVIVVGLPFANVKDEELSARMEYLDIQQKQ 940
Query: 660 ----SSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAH---- 711
SS +L +G +Y R +NQ++GR IRH+ DY +I LD+R+ E+ R
Sbjct: 941 AANNSSSSLTAGRAYYEALCARGVNQSVGRAIRHKDDYATMIFLDQRWCEKDKRNTTTTT 1000
Query: 712 -----------ISKWLRKSIKQYD-SFDASLEGLKSFFR 738
+ W+ + +K D +F ++ + FF+
Sbjct: 1001 QNTALGKYQQTLPGWISRELKVVDGNFGEAVRHVAQFFK 1039
Score = 50.1 bits (118), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 32/56 (57%), Gaps = 5/56 (8%)
Query: 27 FPYQP-YGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQN 81
FPY P Y Q+ FM + R+G ESPTGTGK+LS+LCS L W ++
Sbjct: 34 FPYSPPYEQQIQFMSKAYECC----RNGIPIGAFESPTGTGKTLSILCSALTWMED 85
>gi|71032081|ref|XP_765682.1| DNA repair protein Rad3 [Theileria parva strain Muguga]
gi|68352639|gb|EAN33399.1| DNA repair protein rad3, putative [Theileria parva]
Length = 894
Score = 92.8 bits (229), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 133/591 (22%), Positives = 238/591 (40%), Gaps = 124/591 (20%)
Query: 247 CSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDI------------------KGAILI 288
C Y+AAR D+A +V Y Y+I+P + A+ + +++
Sbjct: 297 CPYFAARRAIDNANIVVLNYQYLIDPKVSDAVFYHLCTENYLKEKREDKDSKPKLPIVVV 356
Query: 289 LDEAHNIEDIARDAGSVDID--------------EDVLLKLQMELEQVCSVNPMIYQPLI 334
DEAHNI+++ +A SV++ ED + +L++ +++ Y+ L+
Sbjct: 357 FDEAHNIDNVCIEALSVELSTETLDNAYSDLSRLEDNVRELRLRDQELLLEE---YRRLV 413
Query: 335 EMTQ----DLVGW--------IERRKATLAKREFQHFFSCWTGD----KALRELQEAN-- 376
E T D+ G+ I R + R+ +HF S K +++EA
Sbjct: 414 ETTDFGSIDIEGYMNPVLRQDIVDRAIPGSIRKAEHFISFLKVVIGYLKKYIKVKEAKSE 473
Query: 377 --------ISRQC-FPILLECATKAIKEATDTESE--------LPHLSGMSVITLEGLFS 419
QC F L T + T S+ + L +T G +
Sbjct: 474 GPLMFLYRFESQCKFKHLHNLHTIKFEHETGINSDVMEHTYNRMKSLLNTLKMTAVGDLT 533
Query: 420 SLTY---FFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELS 476
SL F + G++ + + + + + K S +P L CL+ ++ K V +
Sbjct: 534 SLHLVVDFCTLVGTYYNGFIVIVDPFPKATSYDP------LLQFSCLDASIAMKSVIDNF 587
Query: 477 LSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKT 536
S+ILTSGT+SP+ + L P +D D + ++S G + ++ +
Sbjct: 588 QSVILTSGTISPLEFYPKILNFTPVLMQSLPMSLDRDC-LCPIIVSKGANQVHMSTKFDL 646
Query: 537 ADGYKLMEKLCNRWRETGQWS-RLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCA 595
++ R G L P V S E++L H+Y + G +
Sbjct: 647 RTDITVL-------RNYGSLVIDLCKHIPDGVVCFFPSYAYMELILSHWYET---GILAS 696
Query: 596 VVRKKRVKREGNNDLNTIESQENANK-----KGASFLAVCRGK---------------IV 635
++ K V E + + T + N + +GA FL++CRGK I+
Sbjct: 697 IMEHKLVFMETKDSVTTTLALYNYRRACDVGRGALFLSICRGKVAEGIDFNSHYGRCVIL 756
Query: 636 VGIPFPNINDIQVSLKKKYN---DTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFD 692
VGIPF Q +L K D R + +L NE+ A R Q +GR IR++ D
Sbjct: 757 VGIPF------QYTLSKVLKARLDFMRCNYGILE-NEFITFDAIRQSAQCVGRVIRNKAD 809
Query: 693 YGAIILLDERFQEERNRAHISKWLRKSIKQYDSF---DASLEGLKSFFRDV 740
+G ++ D R+ ++ + W+ K++ + F + ++ K+FFR++
Sbjct: 810 FGLMVFADARYTRIDKKSKLPPWILKNMDPSNLFLTTETAVSVAKAFFRNM 860
Score = 43.5 bits (101), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 6/63 (9%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+ + GI+V FPY + Y Q+ +M + + LD HA+LE PTGTGK+++L
Sbjct: 4 FWIDGIEVFFPYPKIYPEQIAYMKSLKTALD-----SKGHAVLEMPTGTGKTVALFSFVS 58
Query: 77 AWQ 79
++Q
Sbjct: 59 SYQ 61
>gi|365757958|gb|EHM99827.1| Chl1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 861
Score = 92.8 bits (229), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 93/167 (55%), Gaps = 18/167 (10%)
Query: 146 IFYASRTHSQISQVISEYKKTAY-----------RVPMAVLASRKHYCTNKYV---RDKE 191
I++ASRT+SQ+SQ S+ + + +V LAS+K C N V + E
Sbjct: 233 IYFASRTYSQLSQFTSQIRLPTFPSSFRNKVPDEKVKYLPLASKKQLCINPKVTKWKTLE 292
Query: 192 NIDEECKLLLGDRNLGCPQFKNVHKVRGHP---SLQKGGCHEVHDIEDLVNVGQVVRGCS 248
I++ C + GC ++N ++ R P +L+ E+ DIEDLV +G+ + C
Sbjct: 293 AINDACTDARHSKE-GCSFYQNTNEWRHAPDTLALRDTIFSEIQDIEDLVPLGKSLGICP 351
Query: 249 YYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNI 295
YYA+R A++V PY Y+++ R ++++D++ AI+I+DEAHN+
Sbjct: 352 YYASREALPIAEVVTLPYQYLLSESTRSSLQIDLQDAIVIIDEAHNL 398
Score = 81.3 bits (199), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 124/288 (43%), Gaps = 43/288 (14%)
Query: 463 LNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVIS 522
L P V + + S + ++ L + SE F + + D Q + +
Sbjct: 596 LFPKVSSESITTFSCNHVIPKENLKTYATNQSEFEFTFEKRMSPSLINDRLFQFIIELSE 655
Query: 523 TGPDNYPLNASYKTADGYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLK 582
P + A + + Y+ + + W++ + LN + +F E K G E +L
Sbjct: 656 AVPQKGGIVAFFPS---YQYLAHIIECWKQNENLTHLNKVRKIFYESKDG-----EDILA 707
Query: 583 HYYNSISQGSKC---AVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIP 639
Y S+++G A+V K EG I Q+N +CR ++VG+P
Sbjct: 708 GYSESVAEGKGSILFAIVGGKL--SEG------INFQDN----------LCRAVVMVGLP 749
Query: 640 FPNINDIQVSLKKKYNDTYRSSKNLLSGN----------EWYCNQAFRALNQAIGRCIRH 689
FPNI ++ +K+K+ ++K + SG E+ N +A+NQ+IGR IRH
Sbjct: 750 FPNIFSGELIIKRKH----LTNKIMKSGGTKEEASQATREFMENICMKAVNQSIGRAIRH 805
Query: 690 RFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFF 737
DY I LLD R+ R +S+W++ SI + + + + FF
Sbjct: 806 ANDYANIYLLDVRYNRPNFREKLSRWVKDSINSEQTINQIISSTRLFF 853
Score = 58.9 bits (141), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 51/90 (56%), Gaps = 12/90 (13%)
Query: 28 PYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCKLKNQ 87
PY+PY Q+ M T+ R +G A+LESPTGTGK+LSL+C+T+ W L+
Sbjct: 13 PYEPYDIQIQLM----ETVYRVLSEGKKIAILESPTGTGKTLSLICATMTW-----LRMN 63
Query: 88 LANISHSKPDTEAVTDPLANGGGFIPESQP 117
A+I + EA+++ NGG E +P
Sbjct: 64 KADIFTRR---EAISENNENGGESESEDEP 90
>gi|118376302|ref|XP_001021333.1| DNA repair helicase [Tetrahymena thermophila]
gi|89303100|gb|EAS01088.1| DNA repair helicase [Tetrahymena thermophila SB210]
Length = 807
Score = 92.8 bits (229), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 158/747 (21%), Positives = 283/747 (37%), Gaps = 160/747 (21%)
Query: 56 HALLESPTGTGKSLSLLCSTLAWQQNC-----KLKNQLANISHSKPDTEAVTDPLANGGG 110
H ++E PTGTGK++SLL ++ ++ KL + + E V L N
Sbjct: 4 HGIIEMPTGTGKTVSLLALITSYLESNQDKFKKLIYCTRTVVEMEKTIEEVKFILDNRKQ 63
Query: 111 FIPESQPSTIPPSTNGQTAQVAMNNKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYRV 170
PE Q + + ++ N SR S+ +V +E KK
Sbjct: 64 EKPEEQFKFLCTGLSARSNLCIHPN-------------VSRQQSR-DRVDAECKK----- 104
Query: 171 PMAVLASRKHYCTNKYVRDK--ENIDEECKLLLG------DRNLGCPQFKNVHKVRGHPS 222
T +VR + E +C ++L D+ C F+N +
Sbjct: 105 -----------LTAPWVRAQSFEKSSRDCLIILSKIQGDSDQLELCQLFENFEGKKEELK 153
Query: 223 LQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDI 282
+G ++++EDL G+ C Y+ AR + + + ++ Y Y+++ + ++ +
Sbjct: 154 FTEG----IYNLEDLRQYGEKNNICPYFLARRLLNQSNIIVYNYMYMLDAKMTEILDKEF 209
Query: 283 -KGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELE----QVCSVNPMIYQPL-IEM 336
K +++ DEAHNI+++ + +VDI+ +L +E +V V + ++ L E
Sbjct: 210 WKDCLVVFDEAHNIDNVCLEVFTVDINRKLLDMAYKNIEVLGTKVDRVETINHEKLESEY 269
Query: 337 TQDLVGWIERRKATLAKREF----QHFFSCWTGDKALRELQEANISRQCFPILLECATKA 392
Q L G + K L + + S T + +++A Q ++
Sbjct: 270 NQLLQGL--KNKGVLNDNQLNENSKQLPSELTAESIPFHIKKAKPFIQFLKKIVIFLKNR 327
Query: 393 IKEATDTESELP----------HLSGMSV---------------ITLEGLFS---SLTYF 424
+KE T + P HL S+ IT FS ++T+F
Sbjct: 328 LKEKNATTQDPPQFINDMYISSHLDSYSLKLAGERLNMLLNSLEITETDEFSAIDTITHF 387
Query: 425 FSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSG 484
S S+ +++ Q K S N ++ CL+ ++ V S+ILTSG
Sbjct: 388 TSLLASYARGFKIIYQPNPKDGSLNDP-----LMTFACLDCSLAMTHVFTQFKSVILTSG 442
Query: 485 TLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTS--------VISTGPDNYPLNASYKT 536
T+SP++ + L T +D L+S ++ + ++ S
Sbjct: 443 TMSPLDIYPKILNFNPYTVKPLIATKGIDFTQLSSEYEARANMTVTRSYGSLLIDLSKFV 502
Query: 537 ADG-------YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSIS 589
DG Y MEK+ W + G + K L+ E K +Q + HY +
Sbjct: 503 PDGIVAFFPSYMYMEKIIYEWNQEGILDEMRKYKLLYFESKDVAQTSQSLF--HYRKACD 560
Query: 590 QGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKI--------------- 634
G +GA F ++ RGKI
Sbjct: 561 CG------------------------------RGAIFFSIARGKIAEGIDFNEHYGRAVV 590
Query: 635 VVGIPFPNIND-IQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDY 693
+VG P N D I + K + ++ +K NE+ A R Q +GR +R + DY
Sbjct: 591 MVGFPVQNSKDPILIERCKYLTENFKITK-----NEYIEFDAMRQTAQCLGRVMRGKTDY 645
Query: 694 GAIILLDERFQEERNRAHISKWLRKSI 720
G +I+ ++RF ++ + W++K +
Sbjct: 646 GIMIMAEKRFARSLVKSKLPNWIKKQM 672
>gi|124088740|ref|XP_001347217.1| Helicase [Paramecium tetraurelia strain d4-2]
gi|50057606|emb|CAH03590.1| Helicase, putative [Paramecium tetraurelia]
Length = 703
Score = 92.8 bits (229), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 135/300 (45%), Gaps = 49/300 (16%)
Query: 23 IQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCH----ALLESPTGTGKSLSLLCSTLAW 78
I+ ++P+ PY SQL + +L + + ++ ESPTGTGKS +L+ L +
Sbjct: 13 IKSQYPFPPYQSQLDLSKDIYVSLAQGTKVQMYMIVKVSIFESPTGTGKSYALIEGALNY 72
Query: 79 QQNCKLKNQLANISH------------SKPDTEAVTDPL------ANGGGFIPESQPSTI 120
++ K N L + ++PD E +PL + I
Sbjct: 73 LEDIK-SNTLIKVKQKCQIDDGMPDWFNEPDVELKLNPLRKPNENKQQKKHVKLVDDDAI 131
Query: 121 PPSTNGQTAQVAMNNKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKH 180
++ + Q+ + +++ K I Y SRTHSQ+ Q I+E +++ ++V ++ + SR+
Sbjct: 132 FDYSSSEETQINLRGQSLNDK----IIYCSRTHSQLKQFINEIRRSKHKVRVSTIGSRQQ 187
Query: 181 YCTNKYVRDKEN-----IDEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIE 235
C N+ + K N ++ CK C +K++ + + E+ DI
Sbjct: 188 LCVNQSILSKANNNVNKLNHLCK----SHKKQCSYYKSLDTLEQYT-------QEIFDIN 236
Query: 236 DLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNI 295
DL+ + + C YYAA+ ++ A ++ PY ++ + + I+I+DEAHN
Sbjct: 237 DLLTASKKCQSCPYYAAKELSLQADIICTPYQLLMESIDQYI------EPIIIVDEAHNF 290
Score = 84.3 bits (207), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 136/314 (43%), Gaps = 69/314 (21%)
Query: 455 THTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSF--------SSELGVQFGTCLEA 506
++T+ L +N F+ + + S +++ GTL P+N F S+E + E
Sbjct: 429 SNTMKLSKINNYSSFQTLIDKSRNLVFLGGTLQPLNEFEIFKERVDSNEFIFK-----EY 483
Query: 507 PHVIDVDLQVLTSVISTGPDNYPLNASYKTADGYKLMEKLCNRWRETGQWSRLNAKKPLF 566
PH+I D L + N L S+K + E L +T + + +K +
Sbjct: 484 PHIISKDRCQLLVI------NAQLEYSFKQKN-----ENLNQLMIQTNSLIQ-DIEKCI- 530
Query: 567 VEPKGGSQEDFEIVLKHYYNSISQGSKCA----VVRKKRVKREGNNDLNTIESQENANKK 622
P+G ++ Y + Q + A + K+V + +E KK
Sbjct: 531 --PEGI------VIFMQTYTFLEQFKQYAKSNNLQFSKQVFFDEKQSSQILEKYSEVAKK 582
Query: 623 GASFLAV---------------CRGKIVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSG 667
GA L+V R I+ G+P+PN++ + LK++ N ++G
Sbjct: 583 GAILLSVVGGSLSEGINFSDHLARAVIIFGVPYPNLDSFE--LKEQIN---------ING 631
Query: 668 NEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFD 727
N++Y N RA+NQ IGR IRH+ DYG + L+D+RF E++ R S WL+ I + F
Sbjct: 632 NQYYDNITMRAVNQCIGRVIRHKNDYGLLFLIDKRFSEDKLRLKFSTWLQNRITIQNDFK 691
Query: 728 ASLEGLKSFFRDVK 741
+ +FF K
Sbjct: 692 GT-----NFFESFK 700
>gi|195469691|ref|XP_002099770.1| GE16539 [Drosophila yakuba]
gi|194187294|gb|EDX00878.1| GE16539 [Drosophila yakuba]
Length = 859
Score = 92.4 bits (228), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 139/320 (43%), Gaps = 62/320 (19%)
Query: 457 TLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEA------PHVI 510
TL L+PA F D+ E + +I++ GT+ P +L F +C + HV+
Sbjct: 562 TLKYILLDPAEQFADIVEEARAIVIAGGTMQPTQELKEQL---FTSCQDRLVEHFYNHVV 618
Query: 511 DVDLQVLTSVISTGPDNYPLN---ASYKTAD-------------------------GYKL 542
D VL VIS GP PL+ A +A+ Y+
Sbjct: 619 -ADDAVLPFVISNGPSGAPLSFQFAHRASAEMLQELSMLLRNLCQVVPGGVVCFLPSYEY 677
Query: 543 MEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRV 602
++K+ ++G + +K +F E G +++ +L +Y +I + + + V
Sbjct: 678 LDKVYTYLEQSGTLETIRGRKSVFREVSGSAEQ----LLDNYALAIKKPASGGALLLSVV 733
Query: 603 KREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYNDTYRSSK 662
+ + LN + + R +VVG+P+ N ++ + ++ D
Sbjct: 734 GGKLSEGLNFADD-------------LGRAVLVVGLPYANRQSPELRQRMQHLDEKLGPG 780
Query: 663 NLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQ 722
+GNE+Y N +A+NQ IGR +RH DY + LLD+RF + + R + KW+ + I +
Sbjct: 781 ---AGNEYYENLCLKAVNQCIGRAVRHIKDYACVYLLDKRFADPKIRGKLPKWISRHIVE 837
Query: 723 YDSFDASLEGLKS----FFR 738
+S + +++ FF+
Sbjct: 838 SNSANGGFGAVQARTARFFK 857
Score = 80.5 bits (197), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 117/235 (49%), Gaps = 32/235 (13%)
Query: 146 IFYASRTHSQISQVISEYKKTAY--RVPMAVLASRKHYCTNKYVRDKENI---DEEC--- 197
IF+ SRTHSQ++Q+++E +KT + V L SR+ C N VR +++ +E C
Sbjct: 190 IFFCSRTHSQLAQIVAELRKTPHGQAVRCISLGSRQQLCGNPQVRRLKHVGLMNERCLDM 249
Query: 198 ------------KLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVR 245
L + N CP FK V SL+ E DIE+L + G
Sbjct: 250 ATKKARPNPSKKSRLSAEANSRCP-FKAAPLVE---SLRDLALSEPLDIEELASEGAACG 305
Query: 246 GCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSV 305
GCSYYA+RS + AQLV PY ++ R + +++KG+I+I+DEAHN+ D
Sbjct: 306 GCSYYASRSAVEHAQLVLLPYQLLLQKSARNQLGINLKGSIVIVDEAHNLLDSVAQLHGS 365
Query: 306 DIDEDVLLKLQMEL--------EQVCSVNPMIYQPLIEMTQDLVGWIERRKATLA 352
+I+ L + ++++ ++ + N + +I + + L+ ++R K T A
Sbjct: 366 EINRQQLERAKVQISGYKEHFQKRFSTKNLLKINQIIFIVRRLLKVLDRGKETQA 420
Score = 50.4 bits (119), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
Query: 27 FPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
FPY PY Q M + L+R Q + ESPTGTGKSL+L C L W
Sbjct: 20 FPYPPYTIQEQLMQELFQVLERGQV-----GIFESPTGTGKSLTLTCGALTW 66
>gi|157870391|ref|XP_001683746.1| putative DNA excision repair protein [Leishmania major strain
Friedlin]
gi|68126812|emb|CAJ05417.1| putative DNA excision repair protein [Leishmania major strain
Friedlin]
Length = 813
Score = 92.4 bits (228), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 127/606 (20%), Positives = 229/606 (37%), Gaps = 133/606 (21%)
Query: 231 VHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAM-EVDIKGAILIL 289
VH ++DL + G+ C YY R ++ Y Y+++PV+ E + I+++
Sbjct: 164 VHSLDDLKDFGEQHHVCPYYLVRKALPIVDIIVHSYLYMVDPVVSEVTKEFLNENTIVVM 223
Query: 290 DEAHNIEDIARDA--------GSVDIDEDVLLKLQMELEQVCSVNPMIYQ---------- 331
DE HN++D+ +A S+D E+ + L EL+ + + N Q
Sbjct: 224 DEGHNVDDVCIEAMSLILTKKDSLDAKEN-MKDLNKELDHLKATNRQQLQNEYDRLVNGL 282
Query: 332 PLIEMTQD-----------LVGWIERRKATLAKREFQHFFSCWTGDKALRELQEANISRQ 380
+ EM +D + + + R+ HF + A I+R
Sbjct: 283 AMAEMARDPEQRALVEAPAIPANVAEGAIPASLRQANHFLAFMQRLVDFTHRIVARITRT 342
Query: 381 CFPILLECATKAIKEATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQ 440
L TK +E S +LSG + L L + + Y L
Sbjct: 343 YVADPLTFLTKLKEECALEISHFRYLSGRLKVLLTTLQIANAGKYRPVALIAQMYTLLSM 402
Query: 441 KYIKRDSKNPGGNWT-------------HTLSLWCLNPAVVFKDVAELSLSIILTSGTLS 487
Y + PG + C++ ++ +D S+ILTSGTLS
Sbjct: 403 HYTDDRYEKPGFVVVCEAFDPTRPQIPDPVIRTVCVDASLALRDTFARHRSVILTSGTLS 462
Query: 488 PMNSFSSELGV------QFGTCLE----APHVI-------DVDLQVLTS----------- 519
PM+ + LG F L AP ++ ++ + +TS
Sbjct: 463 PMDIYPKILGFTPAISKSFQMTLSRKCIAPVIVTRSSESVNITAEEVTSSFKVRTNPTAQ 522
Query: 520 -VISTGPDNYPLNASYKTADG-------YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKG 571
++++ ++ L + DG Y+ M ++ W +G +L K +FVE +G
Sbjct: 523 ALVTSAYESLLLELAKTVPDGMVCFFTGYQYMGEVLLAWHSSGFLQKLAKHKLIFVETQG 582
Query: 572 GSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCR 631
E+ + L +Y + G +GA F+++ R
Sbjct: 583 --VEETSVALANYRRACDIG------------------------------RGAIFMSIAR 610
Query: 632 GKI---------------VVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAF 676
GKI + G+PF ND + + + + +S +E+ A
Sbjct: 611 GKIAEGIDFDRHYGRAVVMFGVPFLPPNDEPLRQRMHWMEVCLG----ISESEFRNFDAM 666
Query: 677 RALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYD--SFDASLEGLK 734
R +Q IGR +R++ DYG ++L+D+RF I +W+ + +K S DA++ +
Sbjct: 667 RQASQCIGRVLRNKTDYGMMLLVDKRFALNDKVKKIPRWIAQCLKNNTNLSVDAAVAVAR 726
Query: 735 SFFRDV 740
FF+++
Sbjct: 727 GFFKEM 732
>gi|242399192|ref|YP_002994616.1| ERCC2/XPD/Rad3-related DNA repair helicase [Thermococcus sibiricus
MM 739]
gi|242265585|gb|ACS90267.1| ERCC2/XPD/Rad3-related DNA repair helicase [Thermococcus sibiricus
MM 739]
Length = 643
Score = 92.0 bits (227), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 152/636 (23%), Positives = 261/636 (41%), Gaps = 89/636 (13%)
Query: 122 PSTNGQTAQVAMNNKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYR--VPMAVLASRK 179
P+ G+T V K+M I Y +RTH Q+ +VI E K + + V SRK
Sbjct: 36 PTGFGKTISVLAGALPYAKEMGYKIIYLARTHKQMDRVIEELKAISNKTQVSGVEFRSRK 95
Query: 180 HYCTNKYVR----DKENIDEECKLLLGDRNLG-CPQFKNVHKVRGH-PSLQKGGCHEVHD 233
C ++YV+ D N CK L + LG C F+N+ K + L + + +
Sbjct: 96 ELCLHQYVQNFAPDAYNAMIVCKNL---KKLGKCEFFENLKKKKEEFDELAQYFVQKPAE 152
Query: 234 IEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIR----GAMEVDIKGAILIL 289
++ +++ C Y R +A ++ ++ Y Y+I+P IR + D I+I
Sbjct: 153 PMMILTHSKMLDFCPYELTRKIAFNSDVIVASYLYMIDPAIRENFMAYFDFDYSDLIVIF 212
Query: 290 DEAHNIEDIARDAGS-----VDIDEDVLLKLQMELEQVCSVNPMIYQPLIEMTQDLVGWI 344
DEAHN+ + A +A S I+ + + + ++ + + + L + Q+ + +
Sbjct: 213 DEAHNLPNQAINALSDRLSVYSINRAIKEADEYKEHEIANFLSIFLKGLENLYQEKLRDL 272
Query: 345 ERRKATLAKRE-FQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESEL 403
+ + + F H F + E Q I Q A AI+E E L
Sbjct: 273 KIDEVPIIPESIFYHVFDVLK----INEKQLIRILDQMVK-----AGDAIRE-DKIERSL 322
Query: 404 PHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCL 463
P S + + G F L +F+ G DY + S+ G +L L L
Sbjct: 323 PPRSYVGRV---GEF--LLLWFALIGKE--DYLFLM-------SREKG----FSLELVAL 364
Query: 464 NPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVD--LQVLTSVI 521
+P+ V + S I SGT++P+ +F+ +G++ G + P ++ + + ++ +
Sbjct: 365 DPSKALSFVKNVQ-SAIFMSGTMTPLEAFADIMGIE-GKLKKFPRIVKKENAIVLVAKDV 422
Query: 522 STGPDNYPLNASYKTADGYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVL 581
ST D L YK Y ++E + + G ++ S E E +L
Sbjct: 423 STRGDERSLEL-YKKMAKY-IVEAVKLIPKNVGVFT--------------ASYEVLEGLL 466
Query: 582 KHYYN-SISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGK------- 633
+ I + S V +KR NDL + +E A + GA L V G+
Sbjct: 467 SANVDIQIQEVSGKKVFIEKRGASSKENDLLVMAFKEEAKRDGAVLLGVMGGRNSEGQDY 526
Query: 634 --------IVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFRALNQAIGR 685
I+VGIP+ +V + +Y + K G Y A + L QA GR
Sbjct: 527 SGDEMNGVILVGIPYARPTP-KVQAQIRYFENKFPRKGRYYG---YVLPAHKKLVQAAGR 582
Query: 686 CIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIK 721
R + GA+++LD R R + W++++IK
Sbjct: 583 VHRSEEEKGAVVVLDYRLLWSNVRKDLPDWMKETIK 618
>gi|194768579|ref|XP_001966389.1| GF22147 [Drosophila ananassae]
gi|190617153|gb|EDV32677.1| GF22147 [Drosophila ananassae]
Length = 875
Score = 92.0 bits (227), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 145/316 (45%), Gaps = 60/316 (18%)
Query: 461 WCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEA-------PHVIDVD 513
+ + PA F V +L+ ++I+ GT+ P + EL Q +C + HV+ D
Sbjct: 582 FLIQPAEKFGYVVQLARAVIVAGGTMKP----TEELKGQLFSCYQTRIVEHFYGHVVP-D 636
Query: 514 LQVLTSVISTGPDNYPLNASYKTADGYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKG-- 571
VL V+S GP+ L ++ ++++L + Q V P G
Sbjct: 637 NAVLPFVVSHGPNGSALRFNFLQRSNPAMLQELAMVLQNLVQ-----------VIPGGMV 685
Query: 572 ---GSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKRE--GNNDLNTIESQENANKK---- 622
S + E+V +H S G+ + ++K++ RE G+ D +E +A K
Sbjct: 686 CFLPSYDYLEVVYRHLEKS---GTLERISQRKKIFREESGSAD-QLLEDYASAVKDKSSG 741
Query: 623 GASFLAVCRGKI---------------VVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSG 667
GA L+V GK+ VVG+P+PN +++ + ++ D + S+ +G
Sbjct: 742 GALLLSVVGGKLSEGLNFTDDLGRAVLVVGLPYPNRKSLELQTRMQHLDQHLGSR---AG 798
Query: 668 NEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSI----KQY 723
E+Y N +A+NQ IGR IRH DY + LLDER+ ++ ++ + +W+ K I K+
Sbjct: 799 EEFYENLCLKAVNQCIGRAIRHIGDYACVYLLDERYIWKKIQSKLPEWISKHIVEASKEN 858
Query: 724 DSFDASLEGLKSFFRD 739
F A FF++
Sbjct: 859 GGFGAVQARTARFFKE 874
Score = 74.3 bits (181), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 97/199 (48%), Gaps = 29/199 (14%)
Query: 146 IFYASRTHSQISQVISEYKKTAYR--VPMAVLASRKHYCTNKYVRDKENI---DEECKLL 200
IF+ SRTHSQ++Q+++E KKT + V + SR+ C N VR +++ +E C +
Sbjct: 191 IFFCSRTHSQLAQIMAEVKKTPHLSWVRCISMGSRQQLCCNSQVRALKSVAMMNERCLDM 250
Query: 201 LGDRNL--------------------GCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNV 240
+ R L CP K H + SL+ E DIE+L
Sbjct: 251 ITSRALPSQPSTSKKIRITGKESKPSRCP-LKGQHLIE---SLRDLALSEPMDIEELAAE 306
Query: 241 GQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIAR 300
G C+YYA+R+ +A L+ PY +++ R + +++KG+I+I+DEAHN+ D
Sbjct: 307 GTSTGACAYYASRAALSEAHLILLPYQLLLDKSAREQLGINLKGSIVIVDEAHNLLDSVA 366
Query: 301 DAGSVDIDEDVLLKLQMEL 319
+I + Q+E+
Sbjct: 367 QIHGAEITRSDMEFAQLEM 385
Score = 48.5 bits (114), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 29/55 (52%), Gaps = 5/55 (9%)
Query: 24 QVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
Q FPY+PY Q M + L+ + + ESPTGTGKSL+L C L W
Sbjct: 17 QFGFPYEPYEIQKKLMQELFQILENGEV-----GIFESPTGTGKSLTLTCGALTW 66
>gi|367047199|ref|XP_003653979.1| hypothetical protein THITE_2116525 [Thielavia terrestris NRRL 8126]
gi|347001242|gb|AEO67643.1| hypothetical protein THITE_2116525 [Thielavia terrestris NRRL 8126]
Length = 490
Score = 92.0 bits (227), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 95/373 (25%), Positives = 137/373 (36%), Gaps = 125/373 (33%)
Query: 458 LSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFG----TCLEAPHVIDVD 513
LS L+P F +A + ++IL GT+SP + + + L T L HVI
Sbjct: 108 LSYLLLSPTHAFSSIASAARAVILAGGTMSPFDDYRAHLFPTLPPDKITTLSCGHVIPSS 167
Query: 514 LQVLTSVISTGP---------DNYP-------------------LNASYKTADG------ 539
+ ++ ST P D++ LN DG
Sbjct: 168 NLFVWTLASTKPIPPGSSTASDSFEFSFQKRSDRAMIRQLGLALLNICSVVPDGVVVFFP 227
Query: 540 -YKLMEKLCNRWRETGQ-------------------WSRLNAKKPLFVEPKGGSQEDFEI 579
Y ++++ W+ W RL AKK LF E KGGS ED
Sbjct: 228 SYGYLDEVVASWQTPDNPASQGAPGTAGPATAAPTIWDRLAAKKALFRETKGGSSED--- 284
Query: 580 VLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGK------ 633
+L+ Y +I + G SQ+ K GA L+V GK
Sbjct: 285 ILQQYSAAILSPEPTS----------GPAQQQPPTSQKP--KTGAVLLSVVGGKLSEGIN 332
Query: 634 ---------IVVGIPFPNINDIQVSLKKKYNDTYRSSK---------------------- 662
IVVG+P+PNI+ + +Y + S+
Sbjct: 333 FADRLGRCVIVVGLPYPNIHAPDWKARLEYVEATALSRLRDHTHTNTRAERPVQDQDQDQ 392
Query: 663 --NLL-------------SGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEER 707
N L + E+Y N RA+NQ+IGR IRHR DY A++L+D RF ER
Sbjct: 393 GQNPLPTPTREDREQAKQAAREFYENACMRAVNQSIGRVIRHRGDYAAVVLVDRRFGAER 452
Query: 708 NRAHISKWLRKSI 720
RA + W+R +
Sbjct: 453 VRAKLPGWIRAGL 465
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.130 0.381
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,700,797,882
Number of Sequences: 23463169
Number of extensions: 826475109
Number of successful extensions: 2336101
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1383
Number of HSP's successfully gapped in prelim test: 1980
Number of HSP's that attempted gapping in prelim test: 2313609
Number of HSP's gapped (non-prelim): 14192
length of query: 1269
length of database: 8,064,228,071
effective HSP length: 155
effective length of query: 1114
effective length of database: 8,722,404,172
effective search space: 9716758247608
effective search space used: 9716758247608
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 83 (36.6 bits)