BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 000814
(1269 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q3YK19|FANCJ_CHICK Fanconi anemia group J protein homolog OS=Gallus gallus GN=BRIP1
PE=2 SV=1
Length = 1252
Score = 428 bits (1100), Expect = e-118, Method: Compositional matrix adjust.
Identities = 254/691 (36%), Positives = 374/691 (54%), Gaps = 114/691 (16%)
Query: 137 NVKKK------MTPTIFYASRTHSQISQVISEYKKTAYR-VPMAVLASRKHYCTNKYVRD 189
N KKK P IF+ +RTH QI+Q+ E K+TAY VPM +L+SR + C + V
Sbjct: 240 NTKKKANGDQTFIPKIFFGTRTHKQIAQITRELKRTAYSGVPMTILSSRDYTCIHPVVSS 299
Query: 190 -KENIDEEC-KLLLGDRNLGCPQFKNVHKVRGHPSLQKG-GCHEVHDIEDLVNVGQVVRG 246
N +E C +LL G C + VHK+ H +LQ ++ DIEDLV++G+ +R
Sbjct: 300 SNSNRNELCVELLEGKHGKSCLYYHGVHKLSEHYALQSAHNTYQAWDIEDLVSLGKKLRA 359
Query: 247 CSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVD 306
C Y+AAR + A +VFCPY+Y+++P IR +ME+++KG ++ILDEAHNIED AR+A S
Sbjct: 360 CPYFAARELMVGADIVFCPYNYLLDPQIRESMEINLKGQVVILDEAHNIEDSAREAVSYS 419
Query: 307 IDEDVLLKLQMELEQVC--SVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWT 364
+ E L + EL+ + ++ ++ L M L W+ + L + ++ W+
Sbjct: 420 VTESQLNAAREELDFMVNNNIRQKDHEQLRAMCCSLTNWLRESSSQLVETGYETSCKVWS 479
Query: 365 GDKALRELQEANISRQCFPIL-------LECATKAIKEATDTESELPHLSGMSVITLEGL 417
G + L + I+ FPIL LE K + E+P +S + I L+GL
Sbjct: 480 GKEMLNHFHDMGITNISFPILQKHLSAVLEKEEKISMFGKEELVEIPIVSSATQIVLKGL 539
Query: 418 FSSLTYFFSRNGSHVSDYQLALQK-YIKRDSKNPGGNWT-------------------HT 457
F L Y F N DY++ALQ+ Y + P + T H
Sbjct: 540 FMVLLYLFKDNSRFADDYRVALQQTYAWTNDNQPDVSDTSAFFTKTKHKRNLRHKTVVHM 599
Query: 458 LSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVL 517
L+ WCLNPAV F D+ ++ +++LTSGTLSPM+SFSSELGV+F LEA HVI + QV
Sbjct: 600 LNFWCLNPAVAFSDLNDVR-TVVLTSGTLSPMDSFSSELGVKFSIQLEANHVIR-NSQVW 657
Query: 518 TSVISTGPDNYPLNASYKTAD----------------------------GYKLMEKLCNR 549
I TGP+ L A+++ + YKL++KL +R
Sbjct: 658 VGTIGTGPNGRKLCATFQHTETFEFQDEVGALLLSVCQKVGQGILCFLPSYKLLDKLKDR 717
Query: 550 WRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNND 609
W TG W L K + EP+GG++ DF+ +LK YY++I K +G D
Sbjct: 718 WIHTGLWRNLELVKTVIAEPQGGAKSDFDELLKIYYDAI--------------KFKGEKD 763
Query: 610 LNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKKY 654
GA +AVCRGK I +GIPFPN+ D+QV LK+KY
Sbjct: 764 -------------GALLIAVCRGKVSEGLDFCDENARAVITIGIPFPNVKDLQVELKRKY 810
Query: 655 NDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNR--AHI 712
ND +++++ LL G++WY QA+RALNQA+GRCIRHR D+GA+IL+D+RF+ N+ +
Sbjct: 811 NDQHKTTRGLLPGSQWYEIQAYRALNQALGRCIRHRSDWGALILVDDRFRNNPNKYITGL 870
Query: 713 SKWLRKSIKQYDSFDASLEGLKSFF-RDVKG 742
SKW+R+ ++ +++F ++LE L +F R+ KG
Sbjct: 871 SKWIRQQVQHHENFGSALESLHAFAERNQKG 901
Score = 70.9 bits (172), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 49/74 (66%), Gaps = 5/74 (6%)
Query: 15 LNAYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCS 74
++ Y +GG+++ FP + Y SQL M ++ L+ Q H LLESPTG+GKSL+LLCS
Sbjct: 5 VSQYTIGGVKIMFPCKAYPSQLAMMNAIVKGLNNRQ-----HCLLESPTGSGKSLALLCS 59
Query: 75 TLAWQQNCKLKNQL 88
L+WQQ+ K+ L
Sbjct: 60 ALSWQQSLYEKSLL 73
>sp|Q5SXJ3|FANCJ_MOUSE Fanconi anemia group J protein homolog OS=Mus musculus GN=Brip1
PE=2 SV=1
Length = 1174
Score = 420 bits (1079), Expect = e-116, Method: Compositional matrix adjust.
Identities = 241/673 (35%), Positives = 360/673 (53%), Gaps = 108/673 (16%)
Query: 144 PTIFYASRTHSQISQVISEYKKTAYR-VPMAVLASRKHYCTNKYVRDKENIDEEC-KLLL 201
P I++ +RTH QI+Q+ E +KTAY VPM +L+SR H C + V N E+C +LL
Sbjct: 247 PKIYFGTRTHKQIAQITRELRKTAYSGVPMTILSSRDHSCVHPEVVGNFNRKEKCMELLD 306
Query: 202 GDRNLGCPQFKNVHKVRGHPSLQK-GGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQ 260
G C + VHK+ +LQ G DIE+LV++G+ ++ C YY AR + +DA
Sbjct: 307 GKHGKSCYFYHGVHKISNQQTLQHLQGMSRAWDIEELVSLGRKLKACPYYTARELIEDAD 366
Query: 261 LVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELE 320
+VFCPY+Y+++ IR M++ +KG ++ILDEAHNIED AR++ S + E L + EL+
Sbjct: 367 IVFCPYNYLLDSQIRETMDIKLKGQVVILDEAHNIEDCARESASYSVTEVQLRFARDELD 426
Query: 321 QVCSVN--PMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRELQEANIS 378
+ + N ++PL ++ +L+ W+E L +R ++ W+G++ L L I+
Sbjct: 427 SLINGNIRKKSHEPLRDVCYNLINWLETNSKHLVERGYESSCKIWSGNEMLLNLYRMGIT 486
Query: 379 RQCFPILLECATKAIKE--------ATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGS 430
FP+L + +++ + ++P +S + + L+GLF L Y F N
Sbjct: 487 TATFPVLQRHLSAVLQKEEKVTPIHGKEEAIQIPIISASTQVVLKGLFMVLDYLFRENSR 546
Query: 431 HVSDYQLALQKYI--------------------KRDSKNPGGNWTHTLSLWCLNPAVVFK 470
DY++A+Q+ K+ S+ G + L+ WCLNPAV F
Sbjct: 547 FADDYKVAIQQTYSWTNQIAIFDKTGVLAVPKNKKHSRQKIG--VNALNFWCLNPAVAFS 604
Query: 471 DVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPL 530
D+ + +I+LTSGTLSP+ SFSSELGV F LEA HVI + QV + +GP L
Sbjct: 605 DINDKVRTIVLTSGTLSPLKSFSSELGVTFSIQLEANHVIS-NSQVWVGTVGSGPKGRNL 663
Query: 531 NASYKTAD----------------------------GYKLMEKLCNRWRETGQWSRLNAK 562
A+++ + YKL+EKL RW TG W L +
Sbjct: 664 CATFQHTETFEFQDEVGMLLLSVCQTVSQGILCFLPSYKLLEKLRERWIFTGLWHSLESV 723
Query: 563 KPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKK 622
K + EP+GG + DF+ +L+ YY++I K +G D
Sbjct: 724 KTVIAEPQGGEKTDFDELLQVYYDAI--------------KFKGEKD------------- 756
Query: 623 GASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSG 667
GA +AVCRGK I VGIPFPN+ D+QV LK++YND + S+ LL G
Sbjct: 757 GALLIAVCRGKVSEGLDFSDDNARAVITVGIPFPNVKDLQVELKRQYNDHHSKSRGLLPG 816
Query: 668 NEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNR--AHISKWLRKSIKQYDS 725
+WY QA+RALNQA+GRCIRH+ D+GA+IL+D+RF NR + +SKW+R+ I+ + S
Sbjct: 817 RQWYEIQAYRALNQALGRCIRHKNDWGALILVDDRFNNNPNRYISGLSKWVRQQIQHHSS 876
Query: 726 FDASLEGLKSFFR 738
F ++LE L F R
Sbjct: 877 FASALESLTEFSR 889
Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 47/67 (70%), Gaps = 5/67 (7%)
Query: 15 LNAYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCS 74
L+ Y +GG+++ FP + Y +QL M ++ L+ +Q H LLESPTG+GKSL+LLCS
Sbjct: 5 LSDYTIGGVKIHFPCRAYPAQLAMMNSIVRGLNSSQ-----HCLLESPTGSGKSLALLCS 59
Query: 75 TLAWQQN 81
LAWQQ+
Sbjct: 60 ALAWQQS 66
>sp|Q9BX63|FANCJ_HUMAN Fanconi anemia group J protein OS=Homo sapiens GN=BRIP1 PE=1 SV=1
Length = 1249
Score = 420 bits (1079), Expect = e-116, Method: Compositional matrix adjust.
Identities = 246/722 (34%), Positives = 376/722 (52%), Gaps = 112/722 (15%)
Query: 98 TEAVTDPLANGGGFIPESQPSTI------PPSTNGQTAQVAMNNKNVKKKMTPTIFYASR 151
T + PL F P+ P N Q + + + K P I++ +R
Sbjct: 192 TVKLNSPLEKINSFSPQKPPGHCSRCCCSTKQGNSQESSNTIKKDHTGKSKIPKIYFGTR 251
Query: 152 THSQISQVISEYKKTAYR-VPMAVLASRKHYCTNKYVRDKENIDEEC-KLLLGDRNLGCP 209
TH QI+Q+ E ++TAY VPM +L+SR H C + V N +E+C +LL G C
Sbjct: 252 THKQIAQITRELRRTAYSGVPMTILSSRDHTCVHPEVVGNFNRNEKCMELLDGKNGKSCY 311
Query: 210 QFKNVHKVRGHPSLQ--KGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYS 267
+ VHK+ +LQ +G C + DIE+LV++G+ ++ C YY AR + DA ++FCPY+
Sbjct: 312 FYHGVHKISDQHTLQTFQGMC-KAWDIEELVSLGKKLKACPYYTARELIQDADIIFCPYN 370
Query: 268 YIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQVC--SV 325
Y+++ IR +M++++K ++ILDEAHNIED AR++ S + E L + EL+ + ++
Sbjct: 371 YLLDAQIRESMDLNLKEQVVILDEAHNIEDCARESASYSVTEVQLRFARDELDSMVNNNI 430
Query: 326 NPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALRELQEANISRQCFPIL 385
++PL + L+ W+E L +R+++ W+G++ L L + I+ FPIL
Sbjct: 431 RKKDHEPLRAVCCSLINWLEANAEYLVERDYESACKIWSGNEMLLTLHKMGITTATFPIL 490
Query: 386 LECATKAIKE--------ATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQL 437
+ +++ + E+P +S + I L+GLF L Y F +N DY++
Sbjct: 491 QGHFSAVLQKEEKISPIYGKEEAREVPVISASTQIMLKGLFMVLDYLFRQNSRFADDYKI 550
Query: 438 ALQKYI------------------KRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSI 479
A+Q+ K ++ H L+ WCLNPAV F D+ +I
Sbjct: 551 AIQQTYSWTNQIDISDKNGLLVLPKNKKRSRQKTAVHVLNFWCLNPAVAFSDINGKVQTI 610
Query: 480 ILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTAD- 538
+LTSGTLSPM SFSSELGV F LEA H+I + QV I +GP L A+++ +
Sbjct: 611 VLTSGTLSPMKSFSSELGVTFTIQLEANHIIK-NSQVWVGTIGSGPKGRNLCATFQNTET 669
Query: 539 ---------------------------GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKG 571
YKL+EKL RW TG W L K + VEP+G
Sbjct: 670 FEFQDEVGALLLSVCQTVSQGILCFLPSYKLLEKLKERWLSTGLWHNLELVKTVIVEPQG 729
Query: 572 GSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCR 631
G + +F+ +L+ YY++I K +G D GA +AVCR
Sbjct: 730 GEKTNFDELLQVYYDAI--------------KYKGEKD-------------GALLVAVCR 762
Query: 632 GK---------------IVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAF 676
GK I +GIPFPN+ D+QV LK++YND + + LL G +WY QA+
Sbjct: 763 GKVSEGLDFSDDNARAVITIGIPFPNVKDLQVELKRQYNDHHSKLRGLLPGRQWYEIQAY 822
Query: 677 RALNQAIGRCIRHRFDYGAIILLDERFQEERNR--AHISKWLRKSIKQYDSFDASLEGLK 734
RALNQA+GRCIRHR D+GA+IL+D+RF+ +R + +SKW+R+ I+ + +F+++LE L
Sbjct: 823 RALNQALGRCIRHRNDWGALILVDDRFRNNPSRYISGLSKWVRQQIQHHSTFESALESLA 882
Query: 735 SF 736
F
Sbjct: 883 EF 884
Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 45/64 (70%), Gaps = 5/64 (7%)
Query: 18 YHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLA 77
Y +GG+++ FPY+ Y SQL M ++ L+ Q H LLESPTG+GKSL+LLCS LA
Sbjct: 8 YTIGGVKIYFPYKAYPSQLAMMNSILRGLNSKQ-----HCLLESPTGSGKSLALLCSALA 62
Query: 78 WQQN 81
WQQ+
Sbjct: 63 WQQS 66
>sp|Q16X92|RTEL1_AEDAE Regulator of telomere elongation helicase 1 homolog OS=Aedes
aegypti GN=AAEL008960 PE=3 SV=1
Length = 1010
Score = 332 bits (850), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 248/817 (30%), Positives = 376/817 (46%), Gaps = 152/817 (18%)
Query: 18 YHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLA 77
Y + GI V FP++PY Q +M RVI L + + +LESPTGTGK+LSLLCS+LA
Sbjct: 4 YQINGITVNFPFEPYQVQRDYMSRVIECLQNS-----TNGVLESPTGTGKTLSLLCSSLA 58
Query: 78 WQQNCKLK---NQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMN 134
W + K + N NI+ K L GG E + + A+ +
Sbjct: 59 WVLHKKAQVQANMRTNITDLKEFEMVQRKKLGGDGGSGMEELLDKLHDGCGPEGAKWGV- 117
Query: 135 NKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYR-VPMAVLASRKHYCTNKYVRDKENI 193
P I YASRTHSQ++QV+ E K T+Y + +L SR C + V +E
Sbjct: 118 ---------PKIVYASRTHSQLTQVMQEMKNTSYSFMKGVILGSRDQLCIHPEVSKEEGN 168
Query: 194 DEE---CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYY 250
+ CK + R C + V + P + + + DIEDLV VG VR C ++
Sbjct: 169 STKTNLCKAKVQSRT--CSFYSRVESCKERPEVV---SNVIMDIEDLVKVGTKVRACPFF 223
Query: 251 AARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDI-DE 309
++ + + A ++F PY+Y+++P R A ++I I+ILDEAHN+E + ++ S+ I
Sbjct: 224 LSKELIESADILFMPYNYLLDPKARKANNLEISNTIIILDEAHNVEKMCEESASMQIRST 283
Query: 310 DVLLKLQ-----MELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKR------EFQH 358
D+ L + M++ P + + T D + ++ L K F
Sbjct: 284 DIALCIDDVTSIMKVMDHSVAIPEDDETKKDFTIDDLALLKEMLLQLEKTVDSIPVMFSQ 343
Query: 359 FFSCWTGDKALRELQEANISRQCFPI---LLECATKAIKEATDTESELPHLSGMSVITLE 415
+ + G ++ANI + I LLE + I T+ + + G+ +
Sbjct: 344 GGNTFPGTYIFEIFEKANIKEGNYHIIAQLLENIIQYIATITEKNNFVRRGGGLQI---- 399
Query: 416 GLFSSLTYFFSRNGSHVSDYQLALQKYIK-----RDSKNPGGN------WTHT------- 457
L +L+ F+ +G +Y+ ++ K K + K GN WT T
Sbjct: 400 -LAEALSIIFAGSG---PEYRASIDKCYKVHIEIEEQKKTRGNVKQADGWTATKQLVPSV 455
Query: 458 ------LSLWCLNPAVVFKD-VAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVI 510
+S WC NP + + + SIILTSGTL+P+ SEL + LE PH+I
Sbjct: 456 KANAKVVSFWCFNPGFGMRQLLGRNARSIILTSGTLAPLKPLISELDIPIAVRLENPHII 515
Query: 511 DVDLQVLTSVISTGPDNYPLNASYKTAD----------------------------GYKL 542
D QV ++ GPD LN+SY D Y L
Sbjct: 516 DGS-QVCVKIVGQGPDKESLNSSYGNRDNPKYISSLGRTILSFCPIIPGGLLVFFPSYPL 574
Query: 543 MEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRV 602
+ K W+ETG W++++ KP+FVEP+G Q F + YY I+
Sbjct: 575 LNKCQEAWQETGIWAQISRTKPIFVEPRGKDQ--FLNTMSEYYQKIN------------- 619
Query: 603 KREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQ 647
+ + KGA F+AVCRGK I+ G+PFP + D +
Sbjct: 620 ---------------DPDGKGAVFMAVCRGKVSEGLDFADMNGRAVIITGLPFPPLKDAR 664
Query: 648 VSLKKKYNDTYRSSKN-LLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEE 706
V LKKKY R+ +N ++SG+EWY +A RA+NQAIGR IRH+ DYGAI+L D RF
Sbjct: 665 VILKKKYLQEVRTRENEIISGDEWYSLEAARAVNQAIGRVIRHKNDYGAILLCDNRFHNH 724
Query: 707 RNRAHISKWLRKSI--KQYDSFDASLEGLKSFFRDVK 741
R ++ +S W++K + Q+ +F + L FFR+ +
Sbjct: 725 RQKSQLSSWIQKHLNTNQHQNFGPIIGELSRFFRNAE 761
>sp|Q5RJZ1|RTEL1_RAT Regulator of telomere elongation helicase 1 OS=Rattus norvegicus
GN=Rtel1 PE=2 SV=2
Length = 1274
Score = 317 bits (812), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 247/813 (30%), Positives = 376/813 (46%), Gaps = 162/813 (19%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ G+ V+FP+QPY Q +M +V+ L + + +LESPTGTGK+L LLC+TLAW+
Sbjct: 6 LNGVTVDFPFQPYPCQQEYMTKVLECLQKK-----VNGILESPTGTGKTLCLLCTTLAWR 60
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPS-TNGQTAQVAMNNKNV 138
++ L++ ++++ ++ G F + S + NG + +
Sbjct: 61 EH--LRDAVSSLKIAE---------RVQGELFASRTLSSWRSAADANGDSIDCYTD---- 105
Query: 139 KKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE-- 196
P I YASRTHSQ++QVI E + T+YR + VL SR+ C + V+ +E+ +
Sbjct: 106 ----IPKIIYASRTHSQLTQVIGELRNTSYRPKVCVLGSREQLCIHPEVKKQESNHMQIS 161
Query: 197 -CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSM 255
C+ + R+ C + NV + SL++ + DIEDLV G + C YY +R++
Sbjct: 162 LCRKKVASRS--CHFYNNVEE----KSLEQELATPILDIEDLVKNGSKHKVCPYYLSRNL 215
Query: 256 ADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDID-EDVLLK 314
A ++F PY+Y+++ R A +D+KG ++I DEAHN+E I ++ S D+ DV
Sbjct: 216 KQQADIIFMPYNYLLDAKSRKAHNIDLKGTVVIFDEAHNVEKICEESASFDLTPRDVASG 275
Query: 315 LQMELEQVCSVNPMIYQPLIEMTQDLV------GW------IERRKATLAKREFQHFFSC 362
L++ + QV + Q E+ Q+ + G I + K L E
Sbjct: 276 LEV-INQVLEEQARVAQ-HGELQQEFIIDTSSSGLNMELEDIAKLKMILLHLEEAIDAVQ 333
Query: 363 WTGDK---------ALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVIT 413
GD EA I+ Q +LE + I+ T + +G
Sbjct: 334 LPGDDRGVTKPGSYIFELFAEAQITFQTKGCILESLDQIIQHLTGRTGVFTNTAG----- 388
Query: 414 LEGLFSSLTYFFSRN---GSHVSDYQLALQKYIK---------RDSKNPGGNWTHT---- 457
L+ L + FS + GS S L + K R + W+ T
Sbjct: 389 LQKLMDIIQIVFSVDPLEGSPGSQVGLGSSHFYKVHIHPETSHRRAAQRSDAWSTTASRK 448
Query: 458 ----LSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDV 512
LS WC +P+ +++ + + ++ILTSGTL+P++SF+ E+ + F CLE PH+ID
Sbjct: 449 QGKVLSYWCFSPSHSMRELVQQGVRTLILTSGTLAPLSSFALEMQIPFPVCLENPHIIDK 508
Query: 513 DLQVLTSVISTGPDNYPLNASYKTA----------------------------DGYKLME 544
+ Q+ VI GPD L+++Y Y +ME
Sbjct: 509 N-QLWVGVIPRGPDGVQLSSAYDKRFSEECLSSLGKALGNIARVVPHGLLVFFPSYPVME 567
Query: 545 KLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKR 604
K W+ G ++ A KPLFVEP+ ++ F V+ YY ++V
Sbjct: 568 KSLEFWQAQGMSKKVEALKPLFVEPR--NKGSFSEVIDAYY--------------QQVAS 611
Query: 605 EGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVS 649
G+N GA+FLAVCRGK IV G+P+P D +V
Sbjct: 612 PGSN--------------GATFLAVCRGKASEGLDFSDMNGRGVIVTGLPYPPRMDPRVI 657
Query: 650 LKKKYNDTY----RSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQE 705
LK ++ D R LSG EWY QA RA+NQAIGR IRHR DYGAI L D RF
Sbjct: 658 LKMQFLDEMKGRSRVGGQCLSGQEWYQQQASRAVNQAIGRVIRHRHDYGAIFLCDHRFAY 717
Query: 706 ERNRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
RAH+ W+R +K YD+F + + FFR
Sbjct: 718 ADARAHLPSWVRPYLKVYDNFGRVIRDVAQFFR 750
>sp|B0W9F4|RTEL1_CULQU Regulator of telomere elongation helicase 1 homolog OS=Culex
quinquefasciatus GN=CPIJ003765 PE=3 SV=1
Length = 978
Score = 315 bits (808), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 240/822 (29%), Positives = 374/822 (45%), Gaps = 160/822 (19%)
Query: 18 YHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLA 77
Y + GI V FP++PY Q +M RVI L + + +LESPTGTGK+LSLLCS+LA
Sbjct: 4 YLINGIPVNFPFEPYQVQRDYMARVIECLQNSS-----NGVLESPTGTGKTLSLLCSSLA 58
Query: 78 WQQNCKLK---NQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMN 134
W + K + +Q N+S K F + +
Sbjct: 59 WILHKKAQVQASQRTNVSELKEFE------------FEKKKMGGGGGGPKPEMDKLLDEL 106
Query: 135 NKNVKKKM----TPTIFYASRTHSQISQVISEYKKTAYRVPMAV-LASRKHYCTNKYVRD 189
N+N K+ P I YASRTHSQ++Q + E K T+Y AV L SR C + V
Sbjct: 107 NENSGKEGGRWGVPKIIYASRTHSQLTQAMQEMKNTSYGFMRAVILGSRDQLCIHPEVAK 166
Query: 190 KENIDEE---CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRG 246
+E + CK + R C + V + P + + DIEDLV V ++
Sbjct: 167 EEGNAVKTNLCKAKIQAR--ACSFYSRVEACKERPEITGS---TIMDIEDLVRVSTKLKA 221
Query: 247 CSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVD 306
C ++ ++ + ++A ++F PY+Y+++P R A +++ I+ILDEAHN++ + ++ S+
Sbjct: 222 CPFFMSKELIENADVLFMPYNYLLDPKARKANNLELANTIIILDEAHNVDKMCEESASMQ 281
Query: 307 IDEDVLLKLQMELEQVCSVNPMIYQPLI---------EMTQDLVGWIERRKATLAKR--- 354
I + + ++ V S+ ++ + + T D + ++ +L K
Sbjct: 282 IRSS---DIALCIDDVTSIMKVMDNTVAIPEDDDAKKDFTIDDLALLKEMLLSLEKTVDE 338
Query: 355 ---EFQHFFSCWTGDKALRELQEANISRQCFPI---LLECATKAIKEATDTESELPHLSG 408
F S G ++ANI + I LLE + I T+ + + G
Sbjct: 339 IPVMFSQGGSTQPGTYIFEIFEKANIKEGNYHIIAQLLENIIQYIATITEKNNFVRRGGG 398
Query: 409 MSVITLEGLFSSLTYFFSRNGSHVSD---------YQLALQKYIKRDSKNPGGNWTHT-- 457
+ + L SL+ F+ +G + + QK ++ ++K G WT T
Sbjct: 399 LQI-----LAESLSIMFAGSGPQYRESIDKCYKCHIDIEEQKKVRGNTKQADG-WTATKQ 452
Query: 458 -----------LSLWCLNPAVVFKD-VAELSLSIILTSGTLSPMNSFSSELGVQFGTCLE 505
++ WC NP + + + SIILTSGTL+P+ SEL + LE
Sbjct: 453 LVPSVKANAKVINFWCFNPGFGMRQLLGRNARSIILTSGTLAPLKPLISELDIPIAVKLE 512
Query: 506 APHVIDVDLQVLTSVISTGPDNYPLNASYKTAD--------------------------- 538
PH+ID QV ++ GPD LN+SY D
Sbjct: 513 NPHIIDGS-QVCVKIVGQGPDKESLNSSYGNRDNPKYISSLGRTILSFCPIIPGGLLVFF 571
Query: 539 -GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVV 597
Y L+ K W+ETG W++++ KP+FVEP+G Q F + YY I+
Sbjct: 572 PSYPLLNKCQEAWQETGIWAQISRTKPIFVEPRGKDQ--FLNTMTEYYAKIN-------- 621
Query: 598 RKKRVKREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPN 642
+ + KGA F+AVCRGK I+ G+PFP
Sbjct: 622 --------------------DPDGKGAVFMAVCRGKVSEGLDFADMNGRACIITGLPFPP 661
Query: 643 INDIQVSLKKKYNDTYRSSKN-LLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDE 701
+ D +V LKK+Y R+ +N ++SG+EWY +A RA+NQAIGR IRH+ DYGAI+L D
Sbjct: 662 LKDARVILKKRYLQEVRTRENEIISGDEWYSLEAARAVNQAIGRVIRHKNDYGAILLCDN 721
Query: 702 RFQEERNRAHISKWLRKSI--KQYDSFDASLEGLKSFFRDVK 741
RF R +A +S W++K + Q+ +F + L FFR+ +
Sbjct: 722 RFHNPRQKAQLSSWIQKHLNTAQHPTFGPIVRELSQFFRNAE 763
>sp|B3MSG8|RTEL1_DROAN Regulator of telomere elongation helicase 1 homolog OS=Drosophila
ananassae GN=GF20802 PE=3 SV=1
Length = 994
Score = 315 bits (806), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 242/816 (29%), Positives = 372/816 (45%), Gaps = 163/816 (19%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ GI V FP++PY Q +M +VI L +DG + +LESPTGTGK+LSLLCS+LAW
Sbjct: 6 IAGIPVHFPFEPYPVQRAYMEKVIQCL----KDG-TNGVLESPTGTGKTLSLLCSSLAWI 60
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVK 139
+ + ++Q I K P ++ NN V
Sbjct: 61 RTRQSEHQQQMIKLDKGADLL-------------GGGAGGGPELSDLAKTMGKANNWGV- 106
Query: 140 KKMTPTIFYASRTHSQISQVISEYKKTAY-RVPMAVLASRKHYCTNKYV-RDKENIDE-- 195
P + YASRTHSQ++Q + E K+TAY + VL SR C + V R+ N ++
Sbjct: 107 ----PKVIYASRTHSQLTQAMRELKRTAYSNMRSVVLGSRDQLCIHPEVSREVGNSNKVN 162
Query: 196 ECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSM 255
CKL + + C V + HP + + DIEDL+ VGQ ++ C YYA++ +
Sbjct: 163 MCKLRVHSKT--CTFQLRVESKKDHPDFRG---PSIMDIEDLIKVGQKLKMCPYYASKEL 217
Query: 256 ADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDI-DEDVLLK 314
A + F PY+Y+++P R A ++++ I+ILDEAHNIE I ++ SV I DV +
Sbjct: 218 VPQADITFMPYNYLLDPKARKANKIELGNTIVILDEAHNIEKICEESASVQIKSSDVAIA 277
Query: 315 LQ---MELEQVCSVNPMIY---QP----------LIEMTQDLVGWIERRKATLAKREFQH 358
++ ++ S +P +P L EM DL I+ A
Sbjct: 278 IEDVTHIMKAFASDSPQDMAGDEPKDFTIDDLMLLKEMLLDLEKAID---AVAVDNPIDG 334
Query: 359 FFSCWTGDKALRELQEANISRQCFPILLECATKAIKE-ATDTESELPHLSGMSVITLEGL 417
+ + L +AN + ++ K ++ ++ ++ G S L L
Sbjct: 335 --ATYPASMIYELLGKANFTYGNVATIVALLDKLVQYLMVASQQQMSLRKGGSFTLLSDL 392
Query: 418 FSSLTYFFSRNGSHVSDYQLALQKYIK-RDSKNP---------GGNWTHTLSL------- 460
LT F+ S + + + +++ +SK P G W SL
Sbjct: 393 ---LTIVFANKESVMGKVHASFKVHVQVEESKQPQGKQAPAKQAGGWLSKASLTNGSTGK 449
Query: 461 -------WCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDV 512
WC NP + + + S+ILTSGTL+P+ +EL + LE PH++D
Sbjct: 450 VAKIINFWCFNPGFGMEQLLNTQVRSVILTSGTLAPLKPLIAELAIPVAQHLENPHIVDQ 509
Query: 513 DLQVLTSVISTGPDNYPLNASYKTAD----------------------------GYKLME 544
QV +I TGPD PL ++Y D Y ++
Sbjct: 510 S-QVYVKIIGTGPDRQPLISNYTNRDNPKYISSLGQTILNVSRLVPDGLLVFFPSYPMLN 568
Query: 545 KLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKR 604
K + W+ +G W+ + +KKP+F+EP+G Q F ++ +Y +I
Sbjct: 569 KCVDAWQASGLWADIASKKPIFLEPRGKDQ--FTSTMEEFYQAIR--------------- 611
Query: 605 EGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVS 649
+ KGA F+AVCRGK I+ G+PFP + D +V
Sbjct: 612 ---------------DSKGACFMAVCRGKVSEGLDFADRNGRAVIITGLPFPPLKDPKVI 656
Query: 650 LKKKYNDTYRSSKN-LLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERN 708
LK++Y ++ R+ +N LLSGNEWY +A RA+NQAIGR IRHR DYGAI+L D RF++
Sbjct: 657 LKRRYLESNRTRENQLLSGNEWYNLEATRAVNQAIGRVIRHRNDYGAILLCDSRFKDAAQ 716
Query: 709 RAHISKWLRKSI---KQYDSFDASLEGLKSFFRDVK 741
+SKW+R + Q F + L+ FF++ +
Sbjct: 717 VQQLSKWIRGHLGDRPQCSPFGPIVRELRQFFKNAE 752
>sp|B4PZB4|RTEL1_DROYA Regulator of telomere elongation helicase 1 homolog OS=Drosophila
yakuba GN=GE16425 PE=3 SV=1
Length = 985
Score = 314 bits (804), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 241/819 (29%), Positives = 367/819 (44%), Gaps = 167/819 (20%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ GI V FP++PY Q +M +VI L RDG + +LESPTGTGK+LSLLCS+LAW
Sbjct: 6 IAGIPVHFPFEPYPVQRAYMEKVIQCL----RDG-TNGVLESPTGTGKTLSLLCSSLAWI 60
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVK 139
+ + ++Q + K D F + + NN V
Sbjct: 61 RTRQSEHQQQMVKMEKAD-------------FTGLGGGAAGGDLSELAKTMGRANNWGV- 106
Query: 140 KKMTPTIFYASRTHSQISQVISEYKKTAY-RVPMAVLASRKHYCTNKYV-RDKENIDEE- 196
P + YASRTHSQ++Q + E K+TAY + VL SR C + V R++ N ++
Sbjct: 107 ----PKVIYASRTHSQLTQAMRELKRTAYANMRSVVLGSRDQLCIHPEVMREQGNSNKTN 162
Query: 197 -CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSM 255
CKL + + C V + HP L+ + DIEDLV VGQ ++ C Y+A+R +
Sbjct: 163 MCKLRVHSKT--CSFQMRVESRKDHPDLRGPS---IMDIEDLVKVGQRLKICPYFASREL 217
Query: 256 ADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKL 315
A + F PY+Y+++P R A ++++ I+ILDEAHNIE I ++ SV I +
Sbjct: 218 VPQADITFMPYNYLLDPKARKANKIELGNTIVILDEAHNIEKICEESASVQIKSS---DV 274
Query: 316 QMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAK--------REFQHFFSCWTGDK 367
M +E V I Q +G E + TL EF+ +
Sbjct: 275 AMAIEDVTH----IMQVFASGESQDMGGDEPKDFTLDDLTLLKEMLLEFEKAIDAVVVEN 330
Query: 368 ALRE-----------LQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVITLEG 416
A+ L +AN + ++ K ++ ++ G + L
Sbjct: 331 AVEGTTFPASMMYELLGKANFTYGNVATIVSLLDKLVQYLLVASQQMTIRKGGTFTMLSD 390
Query: 417 LFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPG----------GNW------------ 454
L LT F+ +S + + +++ + G G W
Sbjct: 391 L---LTIVFANKEDVMSKVYASFKVHVQLEEVKQGHGKQQGGKQHGGWLGKGTIAAATGS 447
Query: 455 ---THTLSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVI 510
++ WC NP + + + S+ILTSGTL+P+ +EL + LE PH++
Sbjct: 448 IKVAKIINFWCFNPGFGMEQLLNTQVRSVILTSGTLAPLKPLIAELAIPVAQHLENPHIV 507
Query: 511 DVDLQVLTSVISTGPD------NYP---------------LNASYKTADG-------YKL 542
D QV +I TGPD NY LN S DG Y +
Sbjct: 508 DQS-QVYVKIIGTGPDRQQLISNYANRDNPKYISSLGQTILNVSRIVPDGLLVFFPSYPM 566
Query: 543 MEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRV 602
+ K + W+ +G W+ ++ KKP+F+EP+ S++ F ++ +Y +I
Sbjct: 567 LNKCVDAWQASGLWADISVKKPIFLEPR--SKDQFTSTMEEFYQAIR------------- 611
Query: 603 KREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQ 647
+ KGA F+AVCRGK I+ G+PFP + D +
Sbjct: 612 -----------------DSKGAVFMAVCRGKVSEGLDFADRNGRAVIITGLPFPPLKDPK 654
Query: 648 VSLKKKYNDTYRSSKN-LLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEE 706
V LK++Y + R+ +N LLSG EWY A RA+NQAIGR IRHR DYGAI+L D RF++
Sbjct: 655 VILKRRYLEANRTRENQLLSGQEWYNLDATRAVNQAIGRVIRHRNDYGAILLCDSRFKDA 714
Query: 707 RNRAHISKWLRKSI---KQYDSFDASLEGLKSFFRDVKG 742
+SKW+R + Q F + L+ FF++ +
Sbjct: 715 SQVQQLSKWIRGHLGDRPQCSPFGPIVRELRQFFKNAEA 753
>sp|Q0VGM9|RTEL1_MOUSE Regulator of telomere elongation helicase 1 OS=Mus musculus
GN=Rtel1 PE=2 SV=2
Length = 1203
Score = 311 bits (797), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 246/819 (30%), Positives = 371/819 (45%), Gaps = 174/819 (21%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ G+ V+FP+QPY Q +M +V+ L + + +LESPTGTGK+L LLCSTLAWQ
Sbjct: 6 LNGVTVDFPFQPYPCQQEYMTKVLECLQKK-----VNGILESPTGTGKTLCLLCSTLAWQ 60
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVK 139
Q+ L++ ++++ ++ Q T A + +
Sbjct: 61 QH--LRDAVSSLKIAE------------------RVQGELFASRTLSSWGSAAAASGDSI 100
Query: 140 KKMT--PTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE- 196
+ T P I YASRTHSQ++QVI E + TAYR + VL SR+ C + V+ +E+ +
Sbjct: 101 ECYTDIPKIIYASRTHSQLTQVIRELRNTAYRPKVCVLGSREQLCIHPEVKKQESNHMQI 160
Query: 197 --CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARS 254
C+ + R+ C + NV L++ + DIEDLV G + C YY +R+
Sbjct: 161 SLCRKKVASRS--CHFYNNVEA----KFLEQDLATPILDIEDLVKNGSKQKMCPYYLSRN 214
Query: 255 MADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDID-EDVLL 313
M A ++F PY+Y+++ R A +D+KG ++I DEAHN+E I ++ S D+ DV
Sbjct: 215 MKQQADIIFMPYNYLLDAKSRKAHSIDLKGTVVIFDEAHNVEKICEESASFDLTPRDVAS 274
Query: 314 KLQMELEQVCSVNPMIYQPLIEMTQDLV------GW------IERRKATLAKREFQHFFS 361
L++ + QV + Q E+ Q+ + G I + K L + E
Sbjct: 275 GLEI-INQVLEEQARVTQQ-GELQQEFIVDTSSSGLNMELEDIAKLKMILLRLEEAIDAV 332
Query: 362 CWTGDK---------ALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVI 412
GD EA I+ Q +LE + I+ HL+G + +
Sbjct: 333 QLPGDDRGVTKPGSYIFELFAEAQITFQTKGCILESLDQIIQ----------HLAGRTGV 382
Query: 413 -----TLEGLFSSLTYFFSRN---GSHVSDYQLALQKYIK---------RDSKNPGGNWT 455
L+ L + FS + GS S L + K R + W+
Sbjct: 383 FTNTAGLQKLMDIIQIVFSVDPPEGSPGSLVGLGISHSYKVHIHPETSHRRAAKRSDAWS 442
Query: 456 HT--------LSLWCLNPAVVFKD-VAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEA 506
T LS WC +P+ ++ V + ++ILTSGTL+P++SF+ E+ + F CLE
Sbjct: 443 TTASRKQGKVLSYWCFSPSQSMRELVCQGVRTLILTSGTLAPLSSFALEMQIPFPVCLEN 502
Query: 507 PHVIDVDLQVLTSVISTGPDNYPLNASYKTA----------------------------D 538
PH+ID + Q+ ++ GPD L+++Y
Sbjct: 503 PHIIDKN-QLWVGIVPRGPDGVQLSSAYDKRFSEECLSSLGKALSNIARVVPHGLLVFFP 561
Query: 539 GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVR 598
Y +MEK W+ G ++ A KPLFVEP+ ++ F V+ YY ++
Sbjct: 562 SYPVMEKSLEFWQVQGLARKVEALKPLFVEPR--NKGSFSEVIDAYYQQVA--------- 610
Query: 599 KKRVKREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNI 643
+ GA+FLAVCRGK IV G+P+P
Sbjct: 611 -------------------SPASNGATFLAVCRGKASEGLDFSDMNGRGVIVTGLPYPPR 651
Query: 644 NDIQVSLKKKYNDTYRSSKNL----LSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILL 699
D +V LK ++ D R + LSG EWY QA RA+NQAIGR IRHR DYGAI L
Sbjct: 652 MDPRVVLKMQFLDEMRGRSGVGGQCLSGQEWYQQQASRAVNQAIGRVIRHRHDYGAIFLC 711
Query: 700 DERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
D RF RA + W+R +K YD+F + + FFR
Sbjct: 712 DHRFAYADARAQLPSWVRPYLKVYDNFGHVIRDVAQFFR 750
>sp|Q7QEI1|RTEL1_ANOGA Regulator of telomere elongation helicase 1 homolog OS=Anopheles
gambiae GN=AGAP000634 PE=3 SV=5
Length = 991
Score = 310 bits (793), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 236/815 (28%), Positives = 366/815 (44%), Gaps = 160/815 (19%)
Query: 18 YHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLA 77
Y + GI V FP++PY Q +M +VI L + +LESPTGTGK+LSLLCS++A
Sbjct: 4 YMINGIPVNFPFEPYELQKNYMAKVIECLQ-----NKTNGVLESPTGTGKTLSLLCSSMA 58
Query: 78 WQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKN 137
W + K K H + + +P PE + Q + N
Sbjct: 59 WLLHMKSKQP----KHRMETIDTLPEP--------PELSNAKHAALDPEQALALQQQKAN 106
Query: 138 VKKKMTPTIFYASRTHSQISQVISEYKKTAYR-VPMAVLASRKHYCTNKYVRDKENIDEE 196
K K I YASRTHSQ+SQ + E K T+Y V +L SR C + + +EN +
Sbjct: 107 AKMK----IIYASRTHSQLSQAMQELKNTSYLFVRSIILGSRDQLCIHPDISKQENNAIK 162
Query: 197 ---CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAAR 253
C+ + RN C + V + P + V DIEDLV VG+ ++ C YY ++
Sbjct: 163 TVLCRESVKARN--CSFYNRVETAKDRPDV---ATVPVMDIEDLVTVGRKLKACPYYLSK 217
Query: 254 SMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLL 313
+ + A ++F PY+Y+++P R + + ++ ++ILDEAHN+E + + GS +
Sbjct: 218 ELVEQADVIFMPYNYLLDPKARKSNGLSLQNTVIILDEAHNVEKMCEEVGSALLRSS--- 274
Query: 314 KLQMELEQVCSVNPMIY----------QPLIEMTQDLVGWIERRKATLAKRE------FQ 357
+ + +E SV + + +E+T D + ++ + K F
Sbjct: 275 DIALAIEDTSSVIKSMMDGGGAWTGDGEKQLELTLDDLVLLKEILLGVEKAVDDIPILFS 334
Query: 358 HFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVITLEGL 417
+ G L++ANI ++L+ I T ++ G V GL
Sbjct: 335 QGGTTHPGTYIFDLLEKANIKFGNINVVLQVMNSLITHITTEKT------GGFVRRGAGL 388
Query: 418 FSSLTYFFSRNGSHVSDYQLALQK--YIKRDSKNP-----GG-----NWTHT-------- 457
S + + S +Y+ A++K + + + P GG WT T
Sbjct: 389 QSMVDFLEVVFASSGPEYRQAVEKCFRVHIEPEEPKQLAKGGVKRADGWTATKQPLKAPV 448
Query: 458 ------LSLWCLNPAVVFKDVAEL-SLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVI 510
++ WC NP + + + + SIILTSGTL+P+ F SEL + LE PH+I
Sbjct: 449 KSTSKVINFWCFNPGFGMRQLVDSGTRSIILTSGTLAPLKPFISELSLPVAVSLENPHII 508
Query: 511 DVDLQVLTSVISTGPDNYPLNASYKTAD----------------------------GYKL 542
QV VI+ GPD LN+S+K Y L
Sbjct: 509 -ARSQVYVKVITHGPDRVELNSSFKNRSNPEYIASLGRTALSLCPIIPGGLLIFFPSYPL 567
Query: 543 MEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRV 602
+ K W+ +G W +++ K +FVEP+G Q F + YY +
Sbjct: 568 LNKCSEEWQASGIWGQISRLKQIFVEPRGKDQ--FTTTMAEYYAQV-------------- 611
Query: 603 KREGNNDLNTIESQENANKKGASFLAVCRGKI---------------VVGIPFPNINDIQ 647
+ +GA F+AVCRGK+ + G+PFP + D +
Sbjct: 612 --------------RDPASRGAIFMAVCRGKVSEGLDFADANGRAVMITGLPFPPMMDAR 657
Query: 648 VSLKKKYNDTYRSSKN-LLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEE 706
V LKK+Y DT R+ +N L++GN+WY +A RA+NQAIGR IRH+ DYGAI+L D RFQ
Sbjct: 658 VVLKKQYLDTNRTRENELITGNDWYSLEASRAVNQAIGRVIRHKDDYGAILLCDSRFQNA 717
Query: 707 RNRAHISKWLRKSIKQYDS---FDASLEGLKSFFR 738
R +A +S W+ +++ + F + + FFR
Sbjct: 718 RQQAQLSAWIHSHLRESSAVPNFGTVVGEMSRFFR 752
>sp|Q6H1L8|RTEL1_MUSSP Regulator of telomere elongation helicase 1 OS=Mus spretus GN=Rtel1
PE=2 SV=1
Length = 1203
Score = 307 bits (786), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 245/819 (29%), Positives = 369/819 (45%), Gaps = 174/819 (21%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ G+ V+FP+QPY Q +M +V+ L + + +LESPTGTGK+L LLCSTLAWQ
Sbjct: 6 LNGVTVDFPFQPYPCQQEYMTKVLECLQKK-----VNGILESPTGTGKTLCLLCSTLAWQ 60
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVK 139
Q+ L++ ++++ ++ Q T A + +
Sbjct: 61 QH--LRDAISSLKIAE------------------RVQGELFASRTLSSWGSAAAASGDSI 100
Query: 140 KKMT--PTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE- 196
+ T P I YASRTHSQ +QVI E + TAYR + VL SR+ C + V+ +E+ +
Sbjct: 101 ECYTDIPKIIYASRTHSQPTQVIRELRNTAYRPKVCVLGSREQLCIHPEVKKQESNHMQI 160
Query: 197 --CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARS 254
C+ + R+ C + NV L++ + DIEDLV G + C YY +R+
Sbjct: 161 SLCRKKVASRS--CHFYNNVEA----KFLEQDLATPILDIEDLVKNGSKQKMCPYYLSRN 214
Query: 255 MADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDID-EDVLL 313
M A ++F PY+Y+++ R A +D+KG ++I DEAHN+E I ++ S D+ DV
Sbjct: 215 MKQQADIIFMPYNYLLDAKSRKAHSIDLKGTVVIFDEAHNVEKICEESASFDLTPRDVAS 274
Query: 314 KLQMELEQVCSVNPMIYQPLIEMTQDLV------GW------IERRKATLAKREFQHFFS 361
L++ + QV + Q E+ Q+ + G I + K L + E
Sbjct: 275 GLEI-INQVLEEQARVTQQ-GELQQEFIVDTSSSGLNMELEDIAKLKMILLRLEEAIDAV 332
Query: 362 CWTGDK---------ALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVI 412
GD EA I+ Q +LE + I+ HL+G + +
Sbjct: 333 QLPGDDRGVTKPGSYIFELFAEAQITFQTKGCILESLDQIIQ----------HLAGRTGV 382
Query: 413 -----TLEGLFSSLTYFFSRN---GSHVSDYQLALQKYIK---------RDSKNPGGNWT 455
L+ L + FS + GS S L + K R + W+
Sbjct: 383 FTNTAGLQKLMDIIQIVFSVDPPEGSPGSLVGLGISHSYKVHIHPETSHRRAAKRSDAWS 442
Query: 456 HT--------LSLWCLNPAVVFKD-VAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEA 506
T LS WC +P+ ++ V + ++ILTSGTL+P++SF+ E + F CLE
Sbjct: 443 TTASRKQGKVLSYWCFSPSQSMRELVCQGVRTLILTSGTLAPLSSFALEKQIPFPVCLEN 502
Query: 507 PHVIDVDLQVLTSVISTGPDNYPLNASYKTA----------------------------D 538
PH+ID + Q+ ++ GPD L+++Y
Sbjct: 503 PHIIDKN-QLWVGIVPRGPDGVQLSSAYDKRFSEECLSSLGKALSNIARVVPHGLLVFFP 561
Query: 539 GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVR 598
Y +MEK W+ G ++ A KPLFVEP+ ++ F V+ YY ++
Sbjct: 562 SYPVMEKSLEFWQVQGLARKVEALKPLFVEPR--NKGSFSEVIDAYYQQVA--------- 610
Query: 599 KKRVKREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNI 643
+ GA+FLAVCRGK IV G+P+P
Sbjct: 611 -------------------SPASNGATFLAVCRGKASEGLDFSDMNGRGVIVTGLPYPPR 651
Query: 644 NDIQVSLKKKYNDTYRSSKNL----LSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILL 699
D +V LK ++ D R + LSG EWY QA RA+NQAIGR IRHR DYGAI L
Sbjct: 652 MDPRVVLKMQFLDEMRGRSGVGGQCLSGQEWYQQQASRAVNQAIGRVIRHRHDYGAIFLC 711
Query: 700 DERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
D RF RA + W+R +K YD+F ++ + F R
Sbjct: 712 DHRFAYADARAQLPSWVRPYLKVYDNFGHAIRDVAQFLR 750
>sp|Q9NZ71|RTEL1_HUMAN Regulator of telomere elongation helicase 1 OS=Homo sapiens
GN=RTEL1 PE=1 SV=2
Length = 1219
Score = 305 bits (782), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 244/813 (30%), Positives = 367/813 (45%), Gaps = 166/813 (20%)
Query: 22 GIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQN 81
G+ V+FP+QPY Q +M +V+ L + + +LESPTGTGK+L LLC+TLAW+++
Sbjct: 8 GVTVDFPFQPYKCQQEYMTKVLECLQQ-----KVNGILESPTGTGKTLCLLCTTLAWREH 62
Query: 82 CKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKK 141
+ IS K A G P+ S+ + +A
Sbjct: 63 LR-----DGISARKIAERAQ-------GELFPDRALSSWGNAAAAAGDPIACYTD----- 105
Query: 142 MTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE---CK 198
P I YASRTHSQ++QVI+E + T+YR + VL SR+ C + V+ +E+ + C+
Sbjct: 106 -IPKIIYASRTHSQLTQVINELRNTSYRPKVCVLGSREQLCIHPEVKKQESNHLQIHLCR 164
Query: 199 LLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADD 258
+ R+ C + NV + SL++ + DIEDLV G R C YY +R++
Sbjct: 165 KKVASRS--CHFYNNVEEK----SLEQELASPILDIEDLVKSGSKHRVCPYYLSRNLKQQ 218
Query: 259 AQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDE--------- 309
A ++F PY+Y+++ R A +D+KG ++I DEAHN+E + ++ S D+
Sbjct: 219 ADIIFMPYNYLLDAKSRRAHNIDLKGTVVIFDEAHNVEKMCEESASFDLTPHDLASGLDV 278
Query: 310 -DVLLKLQMELEQVCSVNPMIY----QPLIEMTQDLVGWIE----RRKATLAKREFQHFF 360
D +L+ Q + Q +P P + M + + ++ R + + E
Sbjct: 279 IDQVLEEQTKAAQQGEPHPEFSADSPSPGLNMELEDIAKLKMILLRLEGAIDAVELPGDD 338
Query: 361 SCWT--GDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVI-----T 413
S T G EA I+ Q +L+ + I+ HL+G + +
Sbjct: 339 SGVTKPGSYIFELFAEAQITFQTKGCILDSLDQIIQ----------HLAGRAGVFTNTAG 388
Query: 414 LEGLFSSLTYFFSRN---GSHVSDYQL-ALQKYI--------KRDSKNPGGNWTHT---- 457
L+ L + FS + GS S L ALQ Y R + W+ T
Sbjct: 389 LQKLADIIQIVFSVDPSEGSPGSPAGLGALQSYKVHIHPDAGHRRTAQRSDAWSTTAARK 448
Query: 458 ----LSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDV 512
LS WC +P ++ + S+ILTSGTL+P++SF+ E+ + F CLE PH+ID
Sbjct: 449 RGKVLSYWCFSPGHSMHELVRQGVRSLILTSGTLAPVSSFALEMQIPFPVCLENPHIIDK 508
Query: 513 DLQVLTSVISTGPDNYPLNASYKTA----------------------------DGYKLME 544
Q+ V+ GPD L++++ Y +ME
Sbjct: 509 H-QIWVGVVPRGPDGAQLSSAFDRRFSEECLSSLGKALGNIARVVPYGLLIFFPSYPVME 567
Query: 545 KLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKR 604
K WR ++ A KPLFVEP+ S+ F + YY RV
Sbjct: 568 KSLEFWRARDLARKMEALKPLFVEPR--SKGSFSETISAYY--------------ARVAA 611
Query: 605 EGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVS 649
G+ GA+FLAVCRGK IV G+P+P D +V
Sbjct: 612 PGST--------------GATFLAVCRGKASEGLDFSDTNGRGVIVTGLPYPPRMDPRVV 657
Query: 650 LKKKYNDTYR----SSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQE 705
LK ++ D + + LSG EWY QA RA+NQAIGR IRHR DYGA+ L D RF
Sbjct: 658 LKMQFLDEMKGQGGAGGQFLSGQEWYRQQASRAVNQAIGRVIRHRQDYGAVFLCDHRFAF 717
Query: 706 ERNRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
RA + W+R ++ YD+F + + FFR
Sbjct: 718 ADARAQLPSWVRPHVRVYDNFGHVIRDVAQFFR 750
>sp|Q5RE34|RTEL1_PONAB Regulator of telomere elongation helicase 1 OS=Pongo abelii
GN=RTEL1 PE=2 SV=1
Length = 1302
Score = 305 bits (782), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 244/813 (30%), Positives = 373/813 (45%), Gaps = 165/813 (20%)
Query: 22 GIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQN 81
G+ V+FP+QPY Q +M +V+ L + + +LES TGTGK+L LLC+TLAW+++
Sbjct: 8 GVTVDFPFQPYKCQQEYMTKVLECLQQ-----KVNGILESHTGTGKTLCLLCTTLAWREH 62
Query: 82 CKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKK 141
L++ ++ ++ E V G P+ S+ G A A +
Sbjct: 63 --LRDGIS----ARKIAERVQ------GELFPDRALSSW-----GNAAAAAAGDPIACYT 105
Query: 142 MTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE---CK 198
P I YASRTHSQ++QVI+E + T+YR + VL SR+ C + V+ +E+ + C+
Sbjct: 106 DIPKIIYASRTHSQLTQVINELRNTSYRPKVCVLGSREQLCIHPEVKKQESNHIQIHLCR 165
Query: 199 LLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADD 258
+ R+ C + NV + SL++ + DIEDLV G R C YY +R++
Sbjct: 166 KKVASRS--CHFYNNVEEK----SLEQELASPILDIEDLVKSGSKHRVCPYYLSRNLKQQ 219
Query: 259 AQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDE--------- 309
A ++F PY+Y+++ R A +D+KG ++I DEAHN+E + ++ S D+
Sbjct: 220 ADIIFMPYNYLLDAKSRRAHNIDLKGTVVIFDEAHNVEKMCEESASFDLTPHDLASGLDI 279
Query: 310 -DVLLKLQMELEQVCSVNPMI----YQPLIEMTQDLVGWIE----RRKATLAKREFQHFF 360
D +L+ Q + Q +P P + M + + ++ R + + E
Sbjct: 280 IDQVLEEQTKTAQQGEPHPEFSADSTSPGLNMELEDIAKLKMILLRLEGAIDAVELPGDD 339
Query: 361 SCWT--GDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVI-----T 413
S T G EA I+ Q +L+ + I+ HL+G + +
Sbjct: 340 SGVTKPGSYIFELFAEAQITFQTKVCILDSLDQIIQ----------HLAGRAGVFTNTAG 389
Query: 414 LEGLFSSLTYFFSRNGSHVSDYQL----ALQKYI--------KRDSKNPGGNWTHT---- 457
L+ L + FS + S L ALQ Y R + W+ T
Sbjct: 390 LQKLADIIQIVFSVDPSEGGPGSLAGLGALQSYKVHIHPDAGHRQTAQRSDAWSTTAARK 449
Query: 458 ----LSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDV 512
LS WC +P + +++ + S+ILTSGTL+P++SF+ E+ + F CLE PH+ID
Sbjct: 450 RGKVLSYWCFSPGLSMRELVRQGVRSLILTSGTLAPVSSFALEMQIPFPVCLENPHIIDK 509
Query: 513 DLQVLTSVISTGPDNYPLNASY-----------------KTA-----------DGYKLME 544
Q+ V+ GPD L++++ TA Y +ME
Sbjct: 510 H-QIWVGVVPRGPDGAQLSSAFDRRFSEECLSSLGKALGNTARVVPCGLLIFFPSYPVME 568
Query: 545 KLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKR 604
K WR ++ A KPLFVEP+ S+ F + YY RV
Sbjct: 569 KSLEFWRARDLARKMEALKPLFVEPR--SKGSFSETISAYY--------------ARVAA 612
Query: 605 EGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVS 649
G+ GA+FLAVCRGK IV G+P+P D +V
Sbjct: 613 PGST--------------GATFLAVCRGKASEGLDFSDTNGRGVIVTGLPYPPRMDPRVV 658
Query: 650 LKKKYNDTYR----SSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQE 705
LK ++ D + + LSG EWY QA RA+NQAIGR IRHR DYGA+ L D RF
Sbjct: 659 LKMQFLDEMKGQGGAGGQFLSGQEWYRQQASRAVNQAIGRVIRHRQDYGAVFLCDHRFAF 718
Query: 706 ERNRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
RA + W+R ++ YD+F + + FFR
Sbjct: 719 ADARAQLPSWVRPHVRVYDNFGHVIRDVAQFFR 751
>sp|Q93575|RTEL1_CAEEL Regulator of telomere elongation helicase 1 homolog
OS=Caenorhabditis elegans GN=rtel-1 PE=3 SV=3
Length = 994
Score = 253 bits (647), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 225/835 (26%), Positives = 351/835 (42%), Gaps = 203/835 (24%)
Query: 23 IQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNC 82
+ V+FP++PY Q +FM V+ LDR A LESPTGTGK+LSLLCSTLAW Q
Sbjct: 17 LSVKFPFEPYECQRIFMKNVVDVLDR-----KLDAALESPTGTGKTLSLLCSTLAWVQRQ 71
Query: 83 KLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKKM 142
K +KP A GG ++ +K
Sbjct: 72 K---------ETKPLDFATWQTSGAGGA---------------------EKTDEKLKSAY 101
Query: 143 TPTIFYASRTHSQISQVISEYKKTAYR-VPMAVLASRKHYCTNKYVRDKENIDEE---CK 198
PTIFYASRTHSQ+ QV+ E +T Y+ V +L SR+H+C N+ V+ + + + C+
Sbjct: 102 VPTIFYASRTHSQLEQVVHELNRTEYKWVKTTILGSREHFCINQKVKKIKESNRQAHVCR 161
Query: 199 LLLGDRNLGCP---QFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSM 255
L+ R C +F + L KG E DIED V +G C Y+ +R
Sbjct: 162 GLVSKR--ACHYYNKFDACTTDKMTEFLDKG---EAMDIEDFVKLGTQNSLCPYFMSRQR 216
Query: 256 ADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKL 315
++ A+L+ PY+YII+P +R ++D+K +I+I DEAHN+E I S ++ +
Sbjct: 217 SETAELILLPYNYIIDPKMRRRYKLDLKNSIVIFDEAHNLESICESNASAELTSTSIALC 276
Query: 316 QMELEQVC----------------------SVNPMIYQPLIE--MTQDLVGWIERRKATL 351
EL++V S + + LIE T+DL+ +E K
Sbjct: 277 IEELKKVLALLVDEEETARSEADAETGAFGSAKIDLTKKLIENLRTEDLMTVLE--KIFS 334
Query: 352 AKREFQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSV 411
+ E F G L+ + + ILLE KA +A E + L
Sbjct: 335 LEEEMDKLF----GSSQLKSVPPLSGKASDGEILLETLAKAGFDANSVERLVDVLRDAIS 390
Query: 412 ITL------------EGLFSSLTYFFSRNGSHVSDYQLAL-------------------- 439
L +G+ + S +H D A+
Sbjct: 391 YLLSKNEEVALTEKGDGMEKVADFLLSIYSTHAQDVAAAVGEETVKLVDRVDPKTVARNC 450
Query: 440 QKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGV 498
+ YI++D N T+ +C ++ + + + +++L SGTLSP+ +F+ +G+
Sbjct: 451 KLYIQKDKDNEK----LTIKYFCFQASISMRMLKMRGVRNVLLASGTLSPIQAFTYNMGL 506
Query: 499 QFGTCLEAPHVIDVDLQVLTSVISTGPDNYPL-------NASYKTA-------------- 537
FG LE H + + VLTS+++ G N Y T
Sbjct: 507 NFGAILENEHALK-QVPVLTSIVTRGKRGGLAGSFQNRKNLDYVTGVAEALLRVMEVIPQ 565
Query: 538 ------DGYKLMEKLCNRWRETGQ--------WSRLNAKKPLFVEPKGGSQEDFEIVLKH 583
Y M++L W+ T W ++ K + VEP+ ++E+ +
Sbjct: 566 GILIFFSSYSQMDELVATWKTTKWSSNSNESFWEKMEKTKRVVVEPR--AKEELAAIRLR 623
Query: 584 YYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNI 643
Y +S+ + GA+ LAVCRGK+ GI F +
Sbjct: 624 YTQGVSE------------------------------QHGAALLAVCRGKVSEGIDFCDA 653
Query: 644 ---------------NDIQVSLKKKYNDTYRSSKNL----LSGNEWYCNQAFRALNQAIG 684
+D +V LKK Y D K+ S +WY +AFRA+NQAIG
Sbjct: 654 ESRAVIIIGIPYPPIHDERVVLKKMYLDDLMGRKDTKSERQSSQDWYQMEAFRAVNQAIG 713
Query: 685 RCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFRD 739
R +RH+ D+G ++L+D R+ + KWLR +I + D+ +L+ + FF++
Sbjct: 714 RVLRHKDDFGTVVLMDTRYASAKPEM-FPKWLRNTISRSDTDGCALKTSR-FFKE 766
>sp|B4L1Z2|RTEL1_DROMO Regulator of telomere elongation helicase 1 homolog OS=Drosophila
mojavensis GN=GI15901 PE=3 SV=1
Length = 1014
Score = 186 bits (472), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 113/343 (32%), Positives = 164/343 (47%), Gaps = 88/343 (25%)
Query: 451 GGNWTHTLS-------LWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGT 502
G N T T+S WC NP + + + S+ILTSGTL+P+ +EL +
Sbjct: 441 GNNATSTVSKTAKIINFWCFNPGFGMEQLLNTQVRSVILTSGTLAPLKPLIAELAIPVAQ 500
Query: 503 CLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTAD------------------------ 538
LE PH++D QV +I TGPD L ++YK D
Sbjct: 501 HLENPHIVDQS-QVYVKIIGTGPDREQLISNYKNRDNPKYISSLGQTILNVSRIVPDGLL 559
Query: 539 ----GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKC 594
Y ++ + + W+ +G W+ L+++KP+F+EP+G Q F ++ +Y +I
Sbjct: 560 VFFPSYPMLNQCVDAWQASGLWADLSSRKPIFLEPRGKDQ--FTSTMEEFYQAIR----- 612
Query: 595 AVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIP 639
+ KGA F+AVCRGK I+ G+P
Sbjct: 613 -------------------------DSKGACFMAVCRGKVSEGLDFADRNGRAVIITGLP 647
Query: 640 FPNINDIQVSLKKKYNDTYRSSKN-LLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIIL 698
FP + D +V LK++Y +T R+ +N LLSG EWY A RA+NQAIGR IRHR DYGAI+L
Sbjct: 648 FPPLKDPKVILKRRYLETNRTKENQLLSGQEWYNLDATRAVNQAIGRVIRHRHDYGAILL 707
Query: 699 LDERFQEERNRAHISKWLRKSI---KQYDSFDASLEGLKSFFR 738
D RFQ+ +SKW+R + Q F + L+ FF+
Sbjct: 708 CDARFQDASQVQQLSKWIRGHLGARPQSSPFGPIVRELRQFFK 750
Score = 168 bits (426), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 162/302 (53%), Gaps = 32/302 (10%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ GI V FP++PY Q FM +VI L RDG + +LESPTGTGK+LSLLCS+LAW
Sbjct: 6 IAGIPVHFPFEPYEVQRAFMEKVIMCL----RDG-TNGVLESPTGTGKTLSLLCSSLAWI 60
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVK 139
+ + ++Q+ N+ + + + A GG S G + +A+
Sbjct: 61 RTRQSEHQI-NMQKLQMEQQQRQ---ATGG-------------SATGAISDLALTMGKAN 103
Query: 140 KKMTPTIFYASRTHSQISQVISEYKKTAY-RVPMAVLASRKHYCTNKYVRDKE---NIDE 195
P + YASRTHSQ++Q + E K+TAY + VL SR C + V ++ N
Sbjct: 104 NWGVPKVIYASRTHSQLTQAMRELKRTAYASMRSVVLGSRDQLCIHPDVMKEQGNSNKVN 163
Query: 196 ECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSM 255
CKL + + C V + HP + + DIEDLV VGQ ++ C YYA++ +
Sbjct: 164 MCKLKVHAKT--CSFQLRVESKKDHPDFRGPS---IMDIEDLVKVGQRLKMCPYYASKEL 218
Query: 256 ADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDI-DEDVLLK 314
A + F PY+Y+++P R A ++++ I+ILDEAHNIE I ++ SV I DV +
Sbjct: 219 VSSADITFMPYNYLLDPKARKANKIELSNTIVILDEAHNIEKICEESASVQIRSSDVAMA 278
Query: 315 LQ 316
++
Sbjct: 279 IE 280
>sp|B4JNS2|RTEL1_DROGR Regulator of telomere elongation helicase 1 homolog OS=Drosophila
grimshawi GN=GH24089 PE=3 SV=1
Length = 986
Score = 185 bits (470), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 107/329 (32%), Positives = 163/329 (49%), Gaps = 81/329 (24%)
Query: 458 LSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQV 516
++ WC NP + + + S+ILTSGTL+P+ +EL + LE PH+++ + QV
Sbjct: 455 INFWCFNPGFGMEQLLNTHVRSVILTSGTLAPLKPLIAELAIPVAQHLENPHIVN-EAQV 513
Query: 517 LTSVISTGPDNYPLNASYKTAD----------------------------GYKLMEKLCN 548
+I TGPD L ++YK D Y ++ + +
Sbjct: 514 YVKIIGTGPDREQLISNYKNRDNPKYISSLGQTILNVSRIVPDGLLVFFPSYPMLNQCVD 573
Query: 549 RWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNN 608
W+ +G W+ ++++KP+F+EP+G Q F ++ +Y +I
Sbjct: 574 AWQASGLWADISSRKPIFLEPRGKDQ--FTSTMEEFYQAIR------------------- 612
Query: 609 DLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKK 653
+ KGA F+AVCRGK I+ G+PFP + D +V LK++
Sbjct: 613 -----------DSKGACFMAVCRGKVSEGLDFADRNGRAVIITGLPFPPLKDPKVILKRR 661
Query: 654 YNDTYRSSKN-LLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHI 712
Y +T R+ +N LLSGNEWY +A RA+NQAIGR IRHR DYGAI+L D RFQ+ +
Sbjct: 662 YLETNRTRENQLLSGNEWYNLEATRAVNQAIGRVIRHRNDYGAILLCDARFQDASQVQQL 721
Query: 713 SKWLRKSI---KQYDSFDASLEGLKSFFR 738
SKW+R + Q F + L+ FF+
Sbjct: 722 SKWIRNHLGARPQSSPFGPIVRELRQFFK 750
Score = 160 bits (406), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 163/302 (53%), Gaps = 31/302 (10%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ GI V FP++PY Q +M +VI L RDG + +LESPTGTGK+LSLLCSTL W
Sbjct: 6 IAGIPVHFPFEPYDVQRAYMEKVIICL----RDG-TNGVLESPTGTGKTLSLLCSTLGWI 60
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVK 139
+ + + QL N+ + D + A G + + I S N
Sbjct: 61 RTRQSEVQL-NMQKLQHDQQTQLTGAAGAGAAMGSEIAAVIGKSNNWGV----------- 108
Query: 140 KKMTPTIFYASRTHSQISQVISEYKKTAY-RVPMAVLASRKHYCTNKYV-RDKENIDE-- 195
P + YASRTHSQ++Q + E K+TAY + VL SR C + V R++ N ++
Sbjct: 109 ----PKVIYASRTHSQLTQAMRELKRTAYANMRAVVLGSRDQLCIHPDVMREQGNSNKVN 164
Query: 196 ECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSM 255
CKL + ++ C V + HP + + DIEDLV VGQ ++ C Y+A++ +
Sbjct: 165 MCKLKVHAKS--CTFQLRVESKKDHPDFRGPS---IMDIEDLVKVGQRLKMCPYFASKEL 219
Query: 256 ADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDI-DEDVLLK 314
+ A + F PY+Y+++P R A ++++ AI+ILDE HNIE I ++ SV I DV +
Sbjct: 220 VNSADITFMPYNYLLDPKARKANKIELSNAIVILDEGHNIEKICEESASVQIRSSDVAIA 279
Query: 315 LQ 316
++
Sbjct: 280 IE 281
>sp|B4GU19|RTEL1_DROPE Regulator of telomere elongation helicase 1 homolog OS=Drosophila
persimilis GN=GL14463 PE=3 SV=1
Length = 1009
Score = 185 bits (469), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 109/329 (33%), Positives = 159/329 (48%), Gaps = 81/329 (24%)
Query: 458 LSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQV 516
++ WC NP + + + S+ILTSGTL+P+ +EL + LE PH++D QV
Sbjct: 455 VNFWCFNPGFGMEQLLNTQVRSVILTSGTLAPLKPLIAELAIPVAQHLENPHIVDQS-QV 513
Query: 517 LTSVISTGPDNYPLNASYKTAD----------------------------GYKLMEKLCN 548
+I TGPD L +++K D Y ++ K +
Sbjct: 514 YVKIIGTGPDRQQLISNFKNRDNPKYISSLGQTILNVARIVPDGLLVFFPSYPMLNKCVD 573
Query: 549 RWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNN 608
W+ +G W+ ++ KKP+FVEP+G Q F ++ +Y +I
Sbjct: 574 AWQASGLWADISCKKPIFVEPRGKDQ--FTSTMEEFYQAIR------------------- 612
Query: 609 DLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKK 653
+ KGA F+AVCRGK I+ G+PFP + D +V LK++
Sbjct: 613 -----------DSKGAVFMAVCRGKVSEGLDFADRNGRAVIITGLPFPPLKDPKVILKRR 661
Query: 654 YNDTYRSSKN-LLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHI 712
Y +T R+ +N LLSG EWY A RA+NQAIGR IRHR DYGAI+L D RFQ+ +
Sbjct: 662 YLETNRTKENQLLSGQEWYNLDATRAVNQAIGRVIRHRNDYGAILLCDSRFQDASQVQQL 721
Query: 713 SKWLRKSI---KQYDSFDASLEGLKSFFR 738
SKW+R + Q F + L+ FF+
Sbjct: 722 SKWIRGHLGARPQSSPFGPIVRELRQFFK 750
Score = 159 bits (402), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 104/302 (34%), Positives = 155/302 (51%), Gaps = 33/302 (10%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ GI V FP++PY Q +M +VI L RDG + +LESPTGTGK+LSLLC++LAW
Sbjct: 6 IAGIPVHFPFEPYNVQRDYMEKVIICL----RDG-TNGVLESPTGTGKTLSLLCASLAWI 60
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVK 139
+ + ++Q I E G +++AM
Sbjct: 61 RTRQSEHQQQMIKLKATSKEGGPGS------------------GPGGDLSELAMTVGQAN 102
Query: 140 KKMTPTIFYASRTHSQISQVISEYKKTAY-RVPMAVLASRKHYCTNKYVRDKE---NIDE 195
P + YASRTHSQ++Q + E K+TAY + VL SR C + V ++ N
Sbjct: 103 NWGVPKVIYASRTHSQLNQAMRELKRTAYANMRSVVLGSRDQLCIHPEVMKEQGNSNKVN 162
Query: 196 ECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSM 255
CKL + + C V + HP + + DIEDLV VGQ ++ C YYA++ +
Sbjct: 163 LCKLRVHSKT--CTFQLRVESKKDHPDFRGPS---IMDIEDLVRVGQKLKMCPYYASKEL 217
Query: 256 ADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDI-DEDVLLK 314
A + F PY+Y+++P R A ++++ I+ILDEAHNIE I ++ SV I DV +
Sbjct: 218 VAQADITFMPYNYLLDPKARKANKIELGNTIIILDEAHNIEKICEESASVQIRSSDVAMA 277
Query: 315 LQ 316
++
Sbjct: 278 IE 279
>sp|Q29FS3|RTEL1_DROPS Regulator of telomere elongation helicase 1 homolog OS=Drosophila
pseudoobscura pseudoobscura GN=GA17940 PE=3 SV=2
Length = 1009
Score = 185 bits (469), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 109/329 (33%), Positives = 159/329 (48%), Gaps = 81/329 (24%)
Query: 458 LSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQV 516
++ WC NP + + + S+ILTSGTL+P+ +EL + LE PH++D QV
Sbjct: 455 VNFWCFNPGFGMEQLLNTQVRSVILTSGTLAPLKPLIAELAIPVAQHLENPHIVDQS-QV 513
Query: 517 LTSVISTGPDNYPLNASYKTAD----------------------------GYKLMEKLCN 548
+I TGPD L +++K D Y ++ K +
Sbjct: 514 YVKIIGTGPDRQQLISNFKNRDNPKYISSLGQTILNVARIVPDGLLVFFPSYPMLNKCVD 573
Query: 549 RWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNN 608
W+ +G W+ ++ KKP+FVEP+G Q F ++ +Y +I
Sbjct: 574 AWQASGLWADISCKKPIFVEPRGKDQ--FTSTMEEFYQAIR------------------- 612
Query: 609 DLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKK 653
+ KGA F+AVCRGK I+ G+PFP + D +V LK++
Sbjct: 613 -----------DSKGAVFMAVCRGKVSEGLDFADRNGRAVIITGLPFPPLKDPKVILKRR 661
Query: 654 YNDTYRSSKN-LLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHI 712
Y +T R+ +N LLSG EWY A RA+NQAIGR IRHR DYGAI+L D RFQ+ +
Sbjct: 662 YLETNRTKENQLLSGQEWYNLDATRAVNQAIGRVIRHRNDYGAILLCDSRFQDASQVQQL 721
Query: 713 SKWLRKSI---KQYDSFDASLEGLKSFFR 738
SKW+R + Q F + L+ FF+
Sbjct: 722 SKWIRGHLGARPQSSPFGPIVRELRQFFK 750
Score = 159 bits (402), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 104/302 (34%), Positives = 155/302 (51%), Gaps = 33/302 (10%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ GI V FP++PY Q +M +VI L RDG + +LESPTGTGK+LSLLC++LAW
Sbjct: 6 IAGIPVHFPFEPYNVQRDYMEKVIICL----RDG-TNGVLESPTGTGKTLSLLCASLAWI 60
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVK 139
+ + ++Q I E G +++AM
Sbjct: 61 RTRQSEHQQQMIKLKATSKEGGPGS------------------GPGGDLSELAMTVGQAN 102
Query: 140 KKMTPTIFYASRTHSQISQVISEYKKTAY-RVPMAVLASRKHYCTNKYVRDKE---NIDE 195
P + YASRTHSQ++Q + E K+TAY + VL SR C + V ++ N
Sbjct: 103 NWGVPKVIYASRTHSQLNQAMRELKRTAYANMRSVVLGSRDQLCIHPEVMKEQGNSNKVN 162
Query: 196 ECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSM 255
CKL + + C V + HP + + DIEDLV VGQ ++ C YYA++ +
Sbjct: 163 LCKLRVHSKT--CTFQLRVESKKDHPDFRGPS---IMDIEDLVRVGQKLKMCPYYASKEL 217
Query: 256 ADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDI-DEDVLLK 314
A + F PY+Y+++P R A ++++ I+ILDEAHNIE I ++ SV I DV +
Sbjct: 218 VAQADITFMPYNYLLDPKARKANKIELGNTIIILDEAHNIEKICEESASVQIRSSDVAMA 277
Query: 315 LQ 316
++
Sbjct: 278 IE 279
>sp|B4NDG5|RTEL1_DROWI Regulator of telomere elongation helicase 1 homolog OS=Drosophila
willistoni GN=GK24923 PE=3 SV=1
Length = 998
Score = 184 bits (467), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 114/370 (30%), Positives = 177/370 (47%), Gaps = 87/370 (23%)
Query: 457 TLSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQ 515
++ WC NP + + + S+ILTSGTL+P+ +EL + LE PH++D Q
Sbjct: 459 VINFWCFNPGFGMEQLLNTQVRSVILTSGTLAPLKPLIAELAIPVAQHLENPHIVDQS-Q 517
Query: 516 VLTSVISTGPDNYPLNASYKTAD----------------------------GYKLMEKLC 547
V +I TGPD L +++K D Y ++ K
Sbjct: 518 VYVKIIGTGPDRQQLISNFKNRDNPKYISSLGQTILNVSRIVPDGLLVFFPSYPMLNKCV 577
Query: 548 NRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGN 607
+ W+ +G W+ + AKKP+F+EP+G Q F ++ +Y +I
Sbjct: 578 DAWQTSGLWADIAAKKPIFLEPRGKDQ--FTTTMEEFYQAIR------------------ 617
Query: 608 NDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKK 652
+ KGA F+AVCRGK I+ G+P+P + D +V LK+
Sbjct: 618 ------------DSKGACFMAVCRGKVSEGLDFADRNGRAVIITGLPYPPLKDPKVILKR 665
Query: 653 KYNDTYRSSKN-LLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAH 711
+Y + R+ +N LL+G EWY A RA+NQAIGR IRHR DYGAI+L D RFQ+
Sbjct: 666 RYLEANRTKENQLLTGQEWYNLDATRAVNQAIGRVIRHRHDYGAILLCDSRFQDNSQVQQ 725
Query: 712 ISKWLRKSI---KQYDSFDASLEGLKSFFRDVKGWVGKKMFNGLENSDNDVDHVSSMDQC 768
+SKW+R + Q F + L+ FFR + + M E +D + + ++ +
Sbjct: 726 LSKWIRGHLGARPQCSPFGPIVRELRQFFRHAE----ETMEQPKERTDEPL--LKNVYKT 779
Query: 769 KEVTKQNTQE 778
+ VT++N +E
Sbjct: 780 EAVTQENNEE 789
Score = 172 bits (436), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 104/292 (35%), Positives = 161/292 (55%), Gaps = 30/292 (10%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ GI V FP++PY Q FM +VI L RDG + +LESPTGTGK+LSLLCS+LAW
Sbjct: 6 IAGIPVHFPFEPYEVQRAFMEKVIICL----RDG-TNGVLESPTGTGKTLSLLCSSLAWI 60
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVK 139
+ + + Q + +A + G +P G+ A++A+
Sbjct: 61 RTRQSEQQ----KQIRKLQDAANNTKVGPTGIVP------------GEAAELALTVGKAN 104
Query: 140 KKMTPTIFYASRTHSQISQVISEYKKTAYR-VPMAVLASRKHYCTNKYV-RDKENIDE-- 195
P + YASRTHSQ++Q + E K++AY + VL SR C + V R++ N ++
Sbjct: 105 NWGVPKVIYASRTHSQLTQAMRELKRSAYAGMRSVVLGSRDQLCIHPEVMREQGNSNKVN 164
Query: 196 ECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSM 255
CK+ + + C V + HP + + DIEDLV VGQ ++ C Y+A++ +
Sbjct: 165 MCKMRVHSKT--CSFQLRVESKKDHPDFRGPS---IMDIEDLVKVGQKLKMCPYFASKEL 219
Query: 256 ADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDI 307
+DA + F PY+Y+++P+ R A ++++ I+ILDEAHNIE I ++ SV I
Sbjct: 220 VNDADITFMPYNYLLDPMARKANKIELSNTIVILDEAHNIEKICEESASVQI 271
>sp|O14147|CHL1_SCHPO ATP-dependent RNA helicase chl1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=chl1 PE=3 SV=1
Length = 844
Score = 182 bits (462), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 183/693 (26%), Positives = 286/693 (41%), Gaps = 115/693 (16%)
Query: 125 NGQTAQVA-----MNNKNVKKKMTPTIFYASRTHSQISQVISEYKKT---AYRVPMAV-- 174
NG +++V+ ++ N K + I++ SRTHSQ+ Q++ E KK + P+ V
Sbjct: 188 NGYSSKVSELLRKLSPDNEKPPIVQKIYFTSRTHSQLQQLVQEIKKLNNQTFSTPIRVVS 247
Query: 175 LASRKHYCTNKYVRD---KENIDEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEV 231
LASRK+ C N VR ++E+C L G + CP ++ ++ + E+
Sbjct: 248 LASRKNLCINNEVRKLRPTSALNEKCIELQGSAH-KCPFLQDNTQLW---DFRDEALAEI 303
Query: 232 HDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDE 291
DIE+LV +GQ ++ C YY R D AQ+V PY ++ R A+ + +K I I+DE
Sbjct: 304 MDIEELVELGQRLKVCPYYGTREAVDSAQIVTLPYPLLLQESARNALNLTLKDNICIIDE 363
Query: 292 AHNIEDIARDAGSVDIDEDVLLKLQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATL 351
AHN+ D S I QVC + Q + + L G L
Sbjct: 364 AHNLIDAICSMHSSSIS----------FRQVCIAETQLQQYFLRFEKRLNGNNRMHIKQL 413
Query: 352 AKREFQ---HFFSCW---TGDKALR--ELQEANISRQCFPILLECATKAIKEATDTESEL 403
K + F +C T K + L +N + Q L K A +
Sbjct: 414 IKVVYNLKSFFLNCLETNTNSKVINVDSLLVSNGADQINLHHLSEYLNVSKLARKVDGYT 473
Query: 404 PHLSGMSVITLEGLFSSLTYFFSR-NGSHVSDYQLALQK------------------YIK 444
++ + LE L + FS NG Y L + Y K
Sbjct: 474 KYMHSLGTQELESLNDLRSERFSNGNGYEEDPYTPVLMQLESFLLNIANPAPEGKLFYEK 533
Query: 445 RDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCL 504
+ NP L L+P+ + + E S+ L GT+SP++ F + L + +
Sbjct: 534 QTGDNP------YLKYLLLDPSKHVEILTEQCRSVNLAGGTMSPIDDFITLLFSDEQSRI 587
Query: 505 ---EAPHVIDVDLQVLTSVISTGPDNYPLNASYKTAD----------------------- 538
H++ + + T ++S GP P ++K D
Sbjct: 588 LPFSCDHIVPPE-NITTILVSQGPAGVPFEFTHKRKDDENLLKDLGRTFQNFISIIPDGV 646
Query: 539 -----GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSK 593
+ +++ W G +RLNAKKPLF+E K + +HY S+ G
Sbjct: 647 VVFFPSFAFLQQAVKVWEMNGITNRLNAKKPLFIESKDFGDNPLD-TFEHYKQSVDAGLS 705
Query: 594 CAV--VRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLK 651
+ V R+ EG N ++K G R +VVG+PFPN D++ K
Sbjct: 706 GMLFSVIGGRLS-EGIN---------FSDKLG-------RAVMVVGMPFPNSQDVEWQAK 748
Query: 652 KKYNDTYRSSKNL---LSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERN 708
Y + K + + E+Y N RA+NQ+IGR IRHR DY +IILLD R+
Sbjct: 749 VSYVEEKAKEKGINAKQASQEFYENTCMRAVNQSIGRAIRHRDDYASIILLDSRYNRSSI 808
Query: 709 RAHISKWLRKSIKQYDSFDASLEGLKSFFRDVK 741
+ + WL K+I +F ++ L +FFR K
Sbjct: 809 QRKLPNWLSKNIHSSPNFGPAIRQLATFFRAKK 841
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 33/51 (64%), Gaps = 5/51 (9%)
Query: 28 PYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
PY PY QL FM + S++ DG + ESPTGTGKSLSL+C++L W
Sbjct: 16 PYTPYDIQLEFMRSLYSSIS----DGKI-GIFESPTGTGKSLSLICASLTW 61
>sp|B4M891|RTEL1_DROVI Regulator of telomere elongation helicase 1 homolog OS=Drosophila
virilis GN=GJ16649 PE=3 SV=1
Length = 1005
Score = 182 bits (461), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 107/329 (32%), Positives = 159/329 (48%), Gaps = 81/329 (24%)
Query: 458 LSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQV 516
++ WC NP + + + S+ILTSGTL+P+ +EL + LE PH++D QV
Sbjct: 454 INFWCFNPGFGMEQLLNAHVRSVILTSGTLAPLKPLIAELAIPVAQHLENPHIVDRS-QV 512
Query: 517 LTSVISTGPDNYPLNASYKTAD----------------------------GYKLMEKLCN 548
+I TGPD L ++YK D Y ++ + +
Sbjct: 513 YVKIIGTGPDREQLISNYKNRDNPKYISSLGQTILNVSRIVPDGLLVFFPSYPMLNQCVD 572
Query: 549 RWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNN 608
W+ +G W+ ++ +KP+F+EP+G Q F ++ +Y +I
Sbjct: 573 AWQASGLWADISCRKPIFLEPRGKDQ--FTSTMEEFYQAIR------------------- 611
Query: 609 DLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKK 653
+ KGA F+AVCRGK I+ G+PFP + D +V LK++
Sbjct: 612 -----------DSKGACFMAVCRGKVSEGLDFADRNGRAVIITGLPFPPLKDPKVVLKRR 660
Query: 654 YNDTYRSSKN-LLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHI 712
Y +T R+ +N LLSG EWY A RA+NQAIGR IRHR DYGAI+L D RFQ+ +
Sbjct: 661 YLETNRTKENQLLSGQEWYNLDATRAVNQAIGRVIRHRNDYGAILLCDARFQDMSQVQQL 720
Query: 713 SKWLRKSI---KQYDSFDASLEGLKSFFR 738
SKW+R + Q F + L+ FF+
Sbjct: 721 SKWIRGHLGARPQSSPFGPIVRELRQFFK 749
Score = 152 bits (385), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 105/302 (34%), Positives = 156/302 (51%), Gaps = 34/302 (11%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ GI V FP++PY Q +M +VI L RDG + +LESPTGTGK+LSLLC++LAW
Sbjct: 6 IAGIPVHFPFEPYEVQRAYMEKVIMCL----RDG-TNGVLESPTGTGKTLSLLCASLAW- 59
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVK 139
I + + + L N + NN V
Sbjct: 60 -----------IRTRQSEQQQYMQKLQLDQQKQATGGAGAGVADLNAVMGKA--NNWGV- 105
Query: 140 KKMTPTIFYASRTHSQISQVISEYKKTAY-RVPMAVLASRKHYCTNKYV-RDKENIDE-- 195
P + YASRTHSQ+SQ + E K+TAY + VL SR C + V R++ N ++
Sbjct: 106 ----PKVIYASRTHSQLSQAMRELKRTAYANMKSVVLGSRDQLCIHPDVMREQGNSNKVN 161
Query: 196 ECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSM 255
CKL + + C V + HP + + DIEDLV VGQ ++ C Y+A++ +
Sbjct: 162 MCKLKVHAKT--CSFQLRVESKKDHPDFRG---PSIMDIEDLVKVGQRLKMCPYFASKEL 216
Query: 256 ADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDI-DEDVLLK 314
+ A + F PY+Y+++P R A ++++ I+ILDEAHNIE I ++ SV I DV +
Sbjct: 217 VNGADITFMPYNYLLDPKARKANKIELSNTIVILDEAHNIEKICEESASVQIRSSDVAMA 276
Query: 315 LQ 316
++
Sbjct: 277 IE 278
>sp|A4K436|RTEL1_BOVIN Regulator of telomere elongation helicase 1 OS=Bos taurus GN=RTEL1
PE=2 SV=1
Length = 1216
Score = 181 bits (458), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 113/340 (33%), Positives = 159/340 (46%), Gaps = 83/340 (24%)
Query: 447 SKNPGGNWTHTLSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLE 505
++ PG LS WC +P +++ + ++ILTSGTL+PM SFS E+ + F CLE
Sbjct: 444 ARKPG----KVLSYWCFSPGHSMRELVRQGVRTLILTSGTLAPMASFSLEMQIPFPVCLE 499
Query: 506 APHVIDVDLQVLTSVISTGPDNYPLNASY--KTAD------------------------- 538
PHVI+ Q+ VI GPD L++++ + +D
Sbjct: 500 NPHVIN-QHQIWVGVIPKGPDGAQLSSAFDRRFSDECLSSLGKVLSNISRVVPHGLLVFF 558
Query: 539 -GYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVV 597
Y +MEK WR +L +KPLFVEP+ S+ F V++ +Y ++
Sbjct: 559 PSYPVMEKSLEFWRARDFTRKLEVRKPLFVEPR--SKGGFSEVMEAFYARVA-------- 608
Query: 598 RKKRVKREGNNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPN 642
GA FLAVCRGK IV G+P+P
Sbjct: 609 --------------------APESSGAIFLAVCRGKASEGLDFADVNGRGVIVTGLPYPP 648
Query: 643 INDIQVSLKKKYNDTYRSSKN----LLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIIL 698
D +V LK ++ D ++ LSG++WY QA RA+NQAIGR IRHR DYGA+ L
Sbjct: 649 RMDPRVLLKMQFLDEMKAQSGAGGQFLSGHDWYRQQASRAVNQAIGRVIRHRHDYGAVFL 708
Query: 699 LDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
D RF RA + W+R +K YDSF + + FFR
Sbjct: 709 CDHRFAHADTRAQLPSWVRPHVKVYDSFGHVIRDVAQFFR 748
Score = 163 bits (413), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 100/289 (34%), Positives = 153/289 (52%), Gaps = 33/289 (11%)
Query: 22 GIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQN 81
G+ V+FP+QPY Q +M +V+ L + +LESPTGTGK+L LLCSTLAW+++
Sbjct: 8 GVTVDFPFQPYKCQEEYMSKVLECLQEK-----VNGILESPTGTGKTLCLLCSTLAWREH 62
Query: 82 CKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKK 141
+ I+ LA+ G IPE +P
Sbjct: 63 LRDAVSARRIAERASGELFPDRTLASWGNAIPEGD---VPACYTD--------------- 104
Query: 142 MTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE---CK 198
P I YASRTHSQ++QVISE + T+YR + VL SR+ C + V+ +E+ + C+
Sbjct: 105 -IPKIIYASRTHSQLTQVISELRNTSYRPRVCVLGSREQLCIHPEVKKQESNHMQVHLCR 163
Query: 199 LLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADD 258
+ R+ C + NV + SL++ + DIEDLV G + C YY +R++
Sbjct: 164 RKVASRS--CHFYNNVEE----KSLEQELATPILDIEDLVRSGTKHKLCPYYLSRNLKQQ 217
Query: 259 AQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDI 307
A ++F PY+Y+++ R A +D+KG ++I DEAHN+E + +A S D+
Sbjct: 218 ADIIFMPYNYLLDAKSRRAHGIDLKGTVVIFDEAHNVEKMCEEAASFDL 266
>sp|P0C928|RTEL1_DANRE Regulator of telomere elongation helicase 1 OS=Danio rerio GN=rtel1
PE=3 SV=1
Length = 1177
Score = 180 bits (457), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 110/331 (33%), Positives = 150/331 (45%), Gaps = 79/331 (23%)
Query: 456 HTLSLWCLNPAVVFKDVAELSLS-IILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDL 514
+ LS WC +P +++ + IILTSGTLSP++SF+ E+ + F LE PHVI D
Sbjct: 450 NVLSYWCFSPGFSMQELLRQEVRCIILTSGTLSPLSSFTCEMQIPFPVSLENPHVIQRD- 508
Query: 515 QVLTSVISTGPDNYPLNASYKTA----------------------------DGYKLMEKL 546
Q+ S+I GPD L+ ++ Y +M+K
Sbjct: 509 QIFVSIIEKGPDGVQLSTAFDRRFVPENMSSMGNTLVNLSRVVPHGLLVFFPSYPVMDKT 568
Query: 547 CNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREG 606
WR G R+ KP+FVEP+G + F V+ YY +
Sbjct: 569 LEFWRAKGHADRIENVKPMFVEPRG--KGTFTEVIDGYYGKV------------------ 608
Query: 607 NNDLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLK 651
++ N G SF AVCRGK ++ G+PFP D +V LK
Sbjct: 609 ----------DDPNSSGGSFFAVCRGKASEGLDFADTYGRGVVITGLPFPPRMDPRVVLK 658
Query: 652 KKYNDTYRSSK----NLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEER 707
+Y D +K L+G EWY QA RA+NQAIGR IRHR DYGAI L D RF+
Sbjct: 659 MQYLDEMCRNKISGVKYLTGQEWYRQQASRAVNQAIGRVIRHREDYGAIFLCDHRFKSAD 718
Query: 708 NRAHISKWLRKSIKQYDSFDASLEGLKSFFR 738
R + W+R +K YD F + + FFR
Sbjct: 719 ARNQLPSWVRPYVKIYDGFGTMVRDVAQFFR 749
Score = 170 bits (431), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 104/289 (35%), Positives = 156/289 (53%), Gaps = 32/289 (11%)
Query: 22 GIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQN 81
GI V+FP+ PY Q +M +VI L + + +LESPTGTGK+L LLCSTLAW+ +
Sbjct: 8 GINVDFPFTPYPCQEDYMSKVIECLQKK-----VNGVLESPTGTGKTLCLLCSTLAWRDH 62
Query: 82 CKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKK 141
K IS K +T+ + F S +T+G T +
Sbjct: 63 FK-----DTISARK-----ITERMGGAELFADRPMSSWGTAATDGDTPTYYTD------- 105
Query: 142 MTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENID---EECK 198
P I YASRTHSQ++QV++E K T+YR + VL SR+ C N+ V E+ C+
Sbjct: 106 -IPKIIYASRTHSQLTQVVNELKNTSYRPKICVLGSREQLCINQEVMRHESNHIKVHMCR 164
Query: 199 LLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADD 258
+ R+ C + NV + S K + + D+EDLV G+ R C YY +RS+
Sbjct: 165 AKVSSRS--CIFYNNVDE----KSTDKEIVNSILDVEDLVKTGKKQRVCPYYLSRSLKQH 218
Query: 259 AQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDI 307
A ++F PY+Y+++P R A +++KGA++I DEAHN+E + ++ S D+
Sbjct: 219 ADVIFMPYNYLLDPKSRRAHNIELKGAVVIFDEAHNVEKMCEESTSFDL 267
>sp|B3NSW1|RTEL1_DROER Regulator of telomere elongation helicase 1 homolog OS=Drosophila
erecta GN=GG18780 PE=3 SV=1
Length = 985
Score = 179 bits (455), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 109/333 (32%), Positives = 162/333 (48%), Gaps = 81/333 (24%)
Query: 458 LSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQV 516
++ WC NP + + + S+ILTSGTL+P+ +EL + LE PH++D QV
Sbjct: 454 INFWCFNPGFGMEQLLNTQVRSVILTSGTLAPLKPLIAELAIPVAQHLENPHIVDQS-QV 512
Query: 517 LTSVISTGPD------NYP---------------LNASYKTADG-------YKLMEKLCN 548
+I TGPD NY LN S DG Y ++ K +
Sbjct: 513 YVKIIGTGPDRQQLISNYANRDNPKYISSLGQTILNVSRIVPDGLLVFFPSYPMLNKCVD 572
Query: 549 RWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNN 608
W+ +G W+ ++ KKP+F+EP+ S++ F ++ +Y +I
Sbjct: 573 AWQASGLWADISCKKPIFLEPR--SKDQFTSTMEEFYQAIR------------------- 611
Query: 609 DLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKK 653
+ KGA F+AVCRGK I+ G+PFP + D +V LK++
Sbjct: 612 -----------DSKGAVFMAVCRGKVSEGLDFADRNGRAVIITGLPFPPLKDPKVILKRR 660
Query: 654 YNDTYRSSKN-LLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHI 712
Y + R+ +N LLSG EWY A RA+NQAIGR IRHR DYGAI+L D RF++ +
Sbjct: 661 YLEANRTRENQLLSGQEWYNLDATRAVNQAIGRVIRHRNDYGAILLCDSRFKDASQVQQL 720
Query: 713 SKWLRKSI---KQYDSFDASLEGLKSFFRDVKG 742
SKW+R + Q F + L+ FF++ +
Sbjct: 721 SKWIRGHLGDRPQCSPFGPIVRELRQFFKNAEA 753
Score = 171 bits (434), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 109/302 (36%), Positives = 163/302 (53%), Gaps = 33/302 (10%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ GI V FP++PY Q +M +VI L RDG + +LESPTGTGK+LSLLCS+LAW
Sbjct: 6 IAGIPVHFPFEPYPVQRAYMEKVIQCL----RDG-TNGVLESPTGTGKTLSLLCSSLAWI 60
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVK 139
+ + ++Q + K D LA G +T G+ + +
Sbjct: 61 RTRQSEHQQQMVKIEKADFSG----LAGG--------------ATGGELSDLGKTMGRAN 102
Query: 140 KKMTPTIFYASRTHSQISQVISEYKKTAY-RVPMAVLASRKHYCTNKYV-RDKENIDEE- 196
P + YASRTHSQ++Q + E K+TAY + VL SR C + V R++ N ++
Sbjct: 103 NWGVPKVIYASRTHSQLTQAMRELKRTAYANMRSVVLGSRDQLCIHPEVMREQGNSNKTN 162
Query: 197 -CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSM 255
CKL + + C V + HP L+ + DIEDLV VGQ ++ C Y+A+R +
Sbjct: 163 MCKLRVHSKT--CTFQMRVESRKDHPDLRG---PSIMDIEDLVKVGQRLKICPYFASREL 217
Query: 256 ADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDI-DEDVLLK 314
A + F PY+Y+++P R A ++++ I+ILDEAHNIE I ++ SV I DV +
Sbjct: 218 VPQADITFMPYNYLLDPKARKANKIELGNTIVILDEAHNIEKICEESASVQIKSSDVAMA 277
Query: 315 LQ 316
++
Sbjct: 278 IE 279
>sp|Q9W484|RTEL1_DROME Regulator of telomere elongation helicase 1 homolog OS=Drosophila
melanogaster GN=CG4078 PE=1 SV=1
Length = 985
Score = 178 bits (452), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 108/333 (32%), Positives = 162/333 (48%), Gaps = 81/333 (24%)
Query: 458 LSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQV 516
++ WC NP + + + S+ILTSGTL+P+ +EL + LE PH++D QV
Sbjct: 454 INFWCFNPGFGMEQLLNTQVRSVILTSGTLAPLKPLIAELAIPVAQHLENPHIVDQS-QV 512
Query: 517 LTSVISTGPD------NYP---------------LNASYKTADG-------YKLMEKLCN 548
+I TGPD NY LN + DG Y ++ K +
Sbjct: 513 YVKIIGTGPDRQQLISNYANRDNPKYISSLGQTILNVARIVPDGLLVFFPSYPMLNKCVD 572
Query: 549 RWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNN 608
W+ +G W+ ++ KKP+F+EP+ S++ F ++ +Y +I
Sbjct: 573 AWQASGLWADISCKKPIFLEPR--SKDQFTSTMEEFYQAIR------------------- 611
Query: 609 DLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKK 653
+ KGA F+AVCRGK I+ G+PFP + D +V LK++
Sbjct: 612 -----------DSKGAVFMAVCRGKVSEGLDFADRNGRAVIITGLPFPPLKDPKVILKRR 660
Query: 654 YNDTYRSSKN-LLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHI 712
Y + R+ +N LLSG EWY A RA+NQAIGR IRHR DYGAI+L D RF++ +
Sbjct: 661 YLEANRTRENQLLSGQEWYNLDATRAVNQAIGRVIRHRNDYGAILLCDSRFKDASQVQQL 720
Query: 713 SKWLRKSI---KQYDSFDASLEGLKSFFRDVKG 742
SKW+R + Q F + L+ FF++ +
Sbjct: 721 SKWIRGHLGDRPQCSPFGPIVRELRQFFKNAEA 753
Score = 163 bits (412), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 106/302 (35%), Positives = 161/302 (53%), Gaps = 33/302 (10%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ GI V FP++PY Q +M +VI L RDG + +LESPTGTGK+LSLLCS+LAW
Sbjct: 6 IAGIPVHFPFEPYPVQRAYMEKVIHCL----RDG-TNGVLESPTGTGKTLSLLCSSLAWI 60
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVK 139
+ + ++Q + K D + + G +++A
Sbjct: 61 RTRQSEHQKQMVKMEKADFSGLGGG------------------APGGDLSELAKTMGRAN 102
Query: 140 KKMTPTIFYASRTHSQISQVISEYKKTAY-RVPMAVLASRKHYCTNKYV-RDKENIDEE- 196
P + YASRTHSQ++Q + E K+TAY + VL SR C + V R++ N ++
Sbjct: 103 NWGVPKVIYASRTHSQLTQAMRELKRTAYANMRSVVLGSRDQLCIHPEVMREQGNSNKTN 162
Query: 197 -CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSM 255
CKL + + C V + HP L+ + DIEDLV VGQ ++ C Y+A+R +
Sbjct: 163 MCKLRVHSKT--CSFQMRVESRKDHPDLRG---PTIMDIEDLVKVGQRLKICPYFASREL 217
Query: 256 ADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDI-DEDVLLK 314
A + F PY+Y+++P R A ++++ I+ILDEAHNIE I ++ SV I DV +
Sbjct: 218 VPQADITFMPYNYLLDPKARKANKIELGNTIVILDEAHNIEKICEESASVQIKSSDVAMA 277
Query: 315 LQ 316
++
Sbjct: 278 IE 279
>sp|B4I0K4|RTEL1_DROSE Regulator of telomere elongation helicase 1 homolog OS=Drosophila
sechellia GN=GM12432 PE=3 SV=1
Length = 966
Score = 178 bits (452), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 108/333 (32%), Positives = 162/333 (48%), Gaps = 81/333 (24%)
Query: 458 LSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQV 516
++ WC NP + + + S+ILTSGTL+P+ +EL + LE PH++D QV
Sbjct: 435 INFWCFNPGFGMEQLLNTQVRSVILTSGTLAPLKPLIAELAIPVAQHLENPHIVDQS-QV 493
Query: 517 LTSVISTGPD------NYP---------------LNASYKTADG-------YKLMEKLCN 548
+I TGPD NY LN + DG Y ++ K +
Sbjct: 494 YVKIIGTGPDRQQLISNYANRDNPKYVSSLGQTILNVARIVPDGLLVFFPSYPMLNKCVD 553
Query: 549 RWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNN 608
W+ +G W+ ++ KKP+F+EP+ S++ F ++ +Y +I
Sbjct: 554 AWQASGLWADISCKKPIFLEPR--SKDQFTSTMEEFYQAIR------------------- 592
Query: 609 DLNTIESQENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKK 653
+ KGA F+AVCRGK I+ G+PFP + D +V LK++
Sbjct: 593 -----------DSKGAVFMAVCRGKVSEGLDFADRNGRAVIITGLPFPPLKDPKVILKRR 641
Query: 654 YNDTYRSSKN-LLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHI 712
Y + R+ +N LLSG EWY A RA+NQAIGR IRHR DYGAI+L D RF++ +
Sbjct: 642 YLEANRTRENQLLSGQEWYNLDATRAVNQAIGRVIRHRNDYGAILLCDSRFKDASQVQQL 701
Query: 713 SKWLRKSI---KQYDSFDASLEGLKSFFRDVKG 742
SKW+R + Q F + L+ FF++ +
Sbjct: 702 SKWIRGHLGDRPQCSPFGPIVRELRQFFKNAEA 734
Score = 135 bits (339), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 99/302 (32%), Positives = 146/302 (48%), Gaps = 52/302 (17%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+ GI V FP++PY Q +M +VI L RDG + +LESPTGTGK+LSLLCS+LAW
Sbjct: 6 IAGIPVHFPFEPYPVQRAYMEKVIHCL----RDG-TNGVLESPTGTGKTLSLLCSSLAWI 60
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVK 139
+ + ++Q+ + K D + + G +++A
Sbjct: 61 RTRQSEHQMQMVKMEKADFSGIGG------------------GAPGGDLSELAKTMGRAN 102
Query: 140 KKMTPTIFYASRTHSQISQVISEYKKTAY-RVPMAVLASRKHYCTNKYVRDK---ENIDE 195
P + YASRTHSQ++Q + E K+TAY + VL SR C + V + N
Sbjct: 103 NWGVPKVIYASRTHSQLTQAMRELKRTAYANMRSVVLGSRDQLCIHPEVMRELGNSNKTN 162
Query: 196 ECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSM 255
CKL + + C V + HP L+ + DIEDLV VGQ ++ C Y+A+R +
Sbjct: 163 MCKLRVHSKT--CSFQMRVESRKDHPDLRG---PTIMDIEDLVKVGQRLKICPYFASREL 217
Query: 256 ADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDI-DEDVLLK 314
A A ++++ I+ILDEAHNIE I + SV I DV +
Sbjct: 218 AR-------------------ANKIELGNTIVILDEAHNIEKICEEYASVQIKSSDVAMT 258
Query: 315 LQ 316
++
Sbjct: 259 IE 260
>sp|Q6AXC6|DDX11_MOUSE Probable ATP-dependent RNA helicase DDX11 OS=Mus musculus GN=Ddx11
PE=2 SV=1
Length = 880
Score = 172 bits (436), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 180/711 (25%), Positives = 297/711 (41%), Gaps = 155/711 (21%)
Query: 146 IFYASRTHSQISQVISEYKKTAY--RVPMAVLASRKHYCTNKYVRDKENIDEECKLLLGD 203
I+Y SRTHSQ++Q + E K+ + + L SR+ C N+ V++ ++ L+ D
Sbjct: 201 IYYCSRTHSQLAQFVREVLKSPFGKETRLVSLGSRQTLCVNEDVKNLGSVQ-----LMND 255
Query: 204 R--------------------------NLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDL 237
R CP F N ++ L+ EV D+E L
Sbjct: 256 RCVDMQRSKREKNGTGEDKPKRKRQKIQTSCP-FYNHEQME---LLRDEILLEVKDMEQL 311
Query: 238 VNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIED 297
V +G+ R C YY +R AQLV PY +++ R A + ++G ++I+DEAHN+ D
Sbjct: 312 VALGKEARACPYYGSRFAIPAAQLVVLPYPMLLHAATRQAAGIRLQGQVVIIDEAHNLID 371
Query: 298 IARDAGSVDIDEDVLLKLQMELEQ--------VCSVNPMIYQPLIEMTQDLV----GWIE 345
+ S +++ L + +L Q + + N M + ++ + + V G ++
Sbjct: 372 TITNIHSTEVNGSQLCQAHSQLLQYMERYRKRLKAKNLMYIKQILYLLEKFVAVLGGNVK 431
Query: 346 RRKATLAKRE------------FQHFFSCWTGDKALRELQEANISRQCFPILLECATKAI 393
+ T + + FQ K R L+++ +SR+ F EC +
Sbjct: 432 QNPTTQSLSQTGSELKSINDFLFQSQVDNINLFKVQRYLEKSMLSRKLFG-FTECFGVVL 490
Query: 394 KEATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVS----------DYQLALQKYI 443
+D++ E L+G L+ L S T G V+ + LA
Sbjct: 491 PSLSDSQ-ENRGLAGFQQF-LKSLQSGPTEDSPEEGQAVALRPASPLMHIEAFLAALTTA 548
Query: 444 KRDSK----NPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSEL--- 496
+D + G +L LNPAV F V + ++++ GT+ PM+ F +L
Sbjct: 549 NQDGRVIVNRQGSVGQSSLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPMSDFREQLLAC 608
Query: 497 -GVQFGTCLE--APHVIDVDLQVLTSVISTGPDNYPLNASYKTADGYKLMEK-------L 546
GV+ G +E HVI D +L +I +GP N L +Y+ + +++E+ L
Sbjct: 609 SGVEAGRVVEFSCGHVIPPD-NILPLIICSGPSNQQLEFTYQRRELPQMVEETGRILCNL 667
Query: 547 CN---------------------RWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYY 585
CN W +TG +RL+ +K +F EPK SQ E VL Y
Sbjct: 668 CNVVPGGVVCFLPSYEYLRQVHAHWDKTGLLTRLSVRKKIFQEPKRASQ--VEQVLMAY- 724
Query: 586 NSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGK------------ 633
SKC + S + GA L+V GK
Sbjct: 725 ------SKCIMSC----------------SHSEGHLTGALLLSVVGGKMSEGINFSDDLG 762
Query: 634 ---IVVGIPFPNINDIQVSLKKKY-NDTY-RSSKNLLSGNEWYCNQAFRALNQAIGRCIR 688
++VG+P+PNI ++ K Y N T R+ L G N +A+NQ+IGR IR
Sbjct: 763 RCVVMVGMPYPNIKSPELQEKMAYLNQTLPRTQGQPLPGTVLIENLCMKAINQSIGRAIR 822
Query: 689 HRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFRD 739
H+ D+ +I+LLD R+ A + W+R ++ +F + ++ F R+
Sbjct: 823 HQRDFASIVLLDHRYARPSILAKLPAWIRDRVEVKATFGPAFAAVRKFHRE 873
Score = 41.6 bits (96), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 54/108 (50%), Gaps = 17/108 (15%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+GGI FP+ PY Q FM + L+ G + ESPTGTGKSLSL+C L+W
Sbjct: 8 IGGIHFPFPFPPYPIQKDFMAELYKVLE-----GGKIGIFESPTGTGKSLSLICGALSW- 61
Query: 80 QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQ 127
L + K EA+ LA G G P S+ +++ S++ Q
Sbjct: 62 --------LRDFEKKKLQAEALL--LAPGSG-PPSSEKNSLLTSSSCQ 98
>sp|A8WS58|RTEL1_CAEBR Regulator of telomere elongation helicase 1 homolog
OS=Caenorhabditis briggsae GN=rtel-1 PE=3 SV=1
Length = 994
Score = 172 bits (436), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 108/308 (35%), Positives = 159/308 (51%), Gaps = 47/308 (15%)
Query: 25 VEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCKL 84
++FP++PY Q +FM VI LD A LESPTGTGK+LSLLCSTLAW Q K
Sbjct: 19 IKFPFEPYECQRIFMKNVIDVLDM-----KLDAALESPTGTGKTLSLLCSTLAWVQKLK- 72
Query: 85 KNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKKMTP 144
SKP A GG E + +K P
Sbjct: 73 --------ESKPMDFATWQSSGAGGAEKTEDK---------------------LKNSFIP 103
Query: 145 TIFYASRTHSQISQVISEYKKTAYR-VPMAVLASRKHYCTNKYVRDKENIDEE---CKLL 200
TIFYASRTHSQ+ QV+ E +T Y+ V +L SR+H+C N+ V+ + + + C+ L
Sbjct: 104 TIFYASRTHSQLEQVVHELNRTEYKWVKTTILGSREHFCINQKVKKIKESNRQAHVCRGL 163
Query: 201 LGDRNLGCP---QFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMAD 257
+ R+ C +F + + + L+KG E DIED V +G C Y+ +R ++
Sbjct: 164 VSKRS--CHYYNKFDALTTDKANEILEKG---EAMDIEDFVKIGTQNSICPYFMSRQRSE 218
Query: 258 DAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQM 317
A+L+ PY+YII+P +R ++D+K +I+I DEAHN+E I S ++ +
Sbjct: 219 TAELILLPYNYIIDPKMRRRYKLDLKNSIVIFDEAHNLESICESNASAELSSTSIALCIE 278
Query: 318 ELEQVCSV 325
EL++V ++
Sbjct: 279 ELKKVLAL 286
Score = 127 bits (319), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 158/354 (44%), Gaps = 97/354 (27%)
Query: 442 YIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSL-SIILTSGTLSPMNSFSSELGVQF 500
YI++DS + +C ++ + + + +++L SGTLSP+ +F+ +G+ F
Sbjct: 453 YIRKDSGK------LVIKYFCFQASISMRMLKMRGVRNVLLASGTLSPIQAFTYNMGLNF 506
Query: 501 GTCLEAPHVIDVDLQVLTSVISTGPDNYPL-------NASYKTADG-------------- 539
G LE H + + VLTS+++ G + N Y + G
Sbjct: 507 GAILENEHALK-QVPVLTSIVTRGKHGGLVGSFQNRKNIEYVSDVGESLIRVMETTPQGV 565
Query: 540 ------YKLMEKLCNRWRETGQ---------WSRLNAKKPLFVEPKGGSQEDFEIVLKHY 584
Y M++L W++T + W ++ K + VEP+ ++E V Y
Sbjct: 566 LVFFSSYSQMDELVEVWKKTKRGASDSPETFWEKMEKTKKIAVEPR--AKEQLAAVRLRY 623
Query: 585 YNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGK----------- 633
+S+ GA+ LAVCRGK
Sbjct: 624 TQGVSE------------------------------PHGAALLAVCRGKVSEGIDFCDAE 653
Query: 634 ----IVVGIPFPNINDIQVSLKKKYNDTYRSSKNLL----SGNEWYCNQAFRALNQAIGR 685
I+VGIP+P I+D +V LKK Y D K+L S +WY +AFRA+NQAIGR
Sbjct: 654 SRAVIIVGIPYPPIHDERVVLKKMYLDDLMGRKDLTNEPQSSRDWYQMEAFRAVNQAIGR 713
Query: 686 CIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFRD 739
+RH+ D+G ++L+D R+ + KWLR +I + DS + +L+ + FF++
Sbjct: 714 VLRHKNDFGTVVLIDTRYASAKPEM-FPKWLRNTISRCDSNNCALKTAR-FFKE 765
>sp|Q750G3|CHL1_ASHGO ATP-dependent RNA helicase CHL1 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=CHL1
PE=3 SV=1
Length = 801
Score = 162 bits (410), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 195/851 (22%), Positives = 336/851 (39%), Gaps = 188/851 (22%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
+G + P+ PY QL M ++ L+ ++ G + ESPTGTGK+LSL+CST W
Sbjct: 1 MGRCEFYHPFTPYRIQLELMQQIYGLLESGKKMG----IFESPTGTGKTLSLICSTFTWL 56
Query: 80 QNCKL----------------------------KNQLANISHSKPDTE----AV-TDPLA 106
+ K ++ LA+++ S E AV TD L
Sbjct: 57 REHKAGYLQGSTGAQDSEEDSEDEPAWVKENYEQSVLADVTASMRAYEQRLAAVDTDLLV 116
Query: 107 NGGG-----------------FIPESQPSTIP--PSTNGQTAQVAMN-NKNVKKKMTPT- 145
G F+P++ S + PS G Q+ + ++K+ +
Sbjct: 117 KGAAKRQRVEVAVERPDDGAEFLPDAYHSDVEERPSHAGGRGQLRKQLDADIKRLLRKLD 176
Query: 146 ----------------IFYASRTHSQISQVISEYKKTAY----------RVPMAVLASRK 179
+++ASRTH+Q+ Q ++ + + RV L SRK
Sbjct: 177 EPDAADKSRLAANPLKVYFASRTHTQLGQFAAQLRLPQFPPSLAGLEQERVKFLPLGSRK 236
Query: 180 HYCTNKYVRD--KENIDEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDL 237
C +K V + I+E C + C F + Q + DIEDL
Sbjct: 237 QLCIHKKVSKVKSDGINEACMDAVSKSE--CSFFSAAREPDIIRQFQDQAFSTIQDIEDL 294
Query: 238 VNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIED 297
V +G + C YY++R + + A+++ PY +++ R M +D++ +I+++DEAHN+ D
Sbjct: 295 VGIGNTLHACPYYSSRELIEGAEVITLPYQHLLLENARKTMGIDLRDSIIVIDEAHNLID 354
Query: 298 IARDAGSVDIDEDVLLKLQMELE--------QVCSVNPMIYQPLIEMTQDLVGWIERRKA 349
S I L + ++ L+ ++ S N + LI+M L +IE +
Sbjct: 355 TINSIHSASISLTELRQCKLALQAYLAKFKTRLNSGNRVNLLKLIKMVDVLSQFIETQYK 414
Query: 350 TLAKR--EFQHFFSCWTGD-----KALRELQEANISRQCFPILLECATKAIKEATDTESE 402
KR + F + D K + ++ + ++ + + + +++ + +
Sbjct: 415 N-GKRINDPNDIFMGTSMDVVNIHKLEKYMKTSKVAYKIDKYIQATTSNDLQDRGSRDIK 473
Query: 403 LPHLSGM-SVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLW 461
P L + S + S FF NG HV Y L
Sbjct: 474 QPILFKVASFLKTLANPSEEGQFFFENG-HVLKYML------------------------ 508
Query: 462 CLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFG----TCLEAPHVIDVD---- 513
L P+ V K + + +IL GT+ P+N F ++L T HVI D
Sbjct: 509 -LEPSEVLKSIVTEAKCVILAGGTMEPVNDFFTQLVPYLAPTDVTTYSCGHVIPDDNLNA 567
Query: 514 -------------------LQVLTSVISTGPDNYPLNASYKTADGYKLMEKLCNRWRETG 554
++ L I P + YK ++ + W + G
Sbjct: 568 FIVSENFEFTFANREDIALIERLFHFIYQLASRVPFGMVVFFS-SYKYIDFVVKTWTDRG 626
Query: 555 QWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKR--EGNNDLNT 612
SRL+A K ++ E G+ VLK Y +I K A++ R EG N N
Sbjct: 627 LLSRLDAIKRIYHETSDGAD-----VLKGYSETIQSEKKGAILLAVVGGRLSEGINFENE 681
Query: 613 IESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKY--NDTYRSSKNLLSGN-- 668
+ R ++VG+PFPN+ ++ +K+++ R+ N
Sbjct: 682 L----------------ARAVVLVGLPFPNMFSGEMIVKQQHIKEKVIRNGGTQEDVNKA 725
Query: 669 --EWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSF 726
E+Y N +A+NQ++GR IRH D+ + L+D+R+ R + +S W+RK I+ +
Sbjct: 726 VREFYENICMKAVNQSVGRAIRHASDFANVYLIDKRYSGPRIQQKLSDWVRKRIQSASNI 785
Query: 727 DASLEGLKSFF 737
L ++FF
Sbjct: 786 PKILSDTEAFF 796
>sp|Q1E5T3|CHL1_COCIM ATP-dependent RNA helicase CHL1 OS=Coccidioides immitis (strain RS)
GN=CHL1 PE=3 SV=1
Length = 861
Score = 161 bits (408), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 180/709 (25%), Positives = 298/709 (42%), Gaps = 169/709 (23%)
Query: 146 IFYASRTHSQISQVISEYKKTAY--------------------RVP---------MAVLA 176
IFY SRTHSQ++Q E ++ + R P L
Sbjct: 197 IFYCSRTHSQLAQFARELRRVVFPPSIPPETEDGEIDTQGEGRRHPDTELEEPTKHVSLG 256
Query: 177 SRKHYCTNKYVRDKEN---IDEEC------KLLLGDRNLGCPQFKN---VHKVRGHPSLQ 224
SRK C N VR N I+E C +L G + P +N ++ R H
Sbjct: 257 SRKTMCINPKVRRLGNATAINERCLDLQSSNVLPGHKCPFAPSKENELAINDFRDHV--- 313
Query: 225 KGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKG 284
EVHDIED+ +GQ C YYA+RS+ +++V PY ++ R A+++ +K
Sbjct: 314 ---LAEVHDIEDIGKIGQRTGICPYYASRSVIGHSEIVTLPYQLLLQKSARDALDISLKD 370
Query: 285 AILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQVCSVNPMIYQP--------LIEM 336
++I+DEAHN+ D+ + SV++ L +L++ LEQ+ ++ Y+ +
Sbjct: 371 HVIIIDEAHNLMDVIANIHSVNVS---LTQLRIGLEQL-TIYARKYKARLKGKNRVYVAQ 426
Query: 337 TQDLVGWIERR-KATLAKREFQH------FFSCWTG------DKALRELQEANISRQCFP 383
L+G I + ++ LA RE + + G K R LQE+ ++R+
Sbjct: 427 VMRLLGSIAKYLESVLAARELREGAVDPSYLMSGKGIDQINLHKLSRYLQESKLARKV-D 485
Query: 384 ILLECATKAIKEATDTESELPHLSGMSVITLEGLFSSLT--YFFSRNGSHVSDYQLALQK 441
+E +T ++ +T + +P L + L + S FF +NG+ V L K
Sbjct: 486 GYIESSTSLEEKNPETSTTVPVLFQVQSFLLSLMNPSAEGRLFFEKNGNDV------LLK 539
Query: 442 YIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFG 501
Y L+P F++ E + ++IL GT+SPM+ + L
Sbjct: 540 YT------------------LLDPTAHFREAVEEARAVILAGGTMSPMSDYRDHLFSYLA 581
Query: 502 ----TCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYK---------------------T 536
HVI + +S G + + +++ T
Sbjct: 582 PGQLRTFSYGHVIPTS-NLSARPVSRGILDTEFDFTFEKRNSRAMIIDLGKTISEICKAT 640
Query: 537 ADG-------YKLMEKLCNRWRE----TGQWSRLNA---KKPLFVEPKGGSQEDFEIVLK 582
DG Y + ++ W++ +G S L++ KPL E K + + E +L+
Sbjct: 641 PDGVVAFFPSYDFLNQVVEIWKQPCSNSGNPSILDSLGLVKPLLYESKEKAM-NTEALLQ 699
Query: 583 HYYNSISQGSKCAVVRKKRVK-REGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFP 641
Y N I +G ++ K EG N +++ G RG IV+G+PF
Sbjct: 700 KYANFIDEGKGALLLSVMGGKLSEGIN---------FSDRLG-------RGVIVIGLPFA 743
Query: 642 NINDIQVSLKKKY--NDTY---------RSSKNLLSGNEWYCNQAFRALNQAIGRCIRHR 690
NI + K +Y TY R SK L+G ++Y N R +NQ IGR IRH+
Sbjct: 744 NIRSAEWQAKIQYVERKTYERSSGGEETRRSKAKLAGRDFYENACMRVVNQCIGRAIRHQ 803
Query: 691 FDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFFRD 739
DY AI++ D R+ R ++ + +W+R+S+ A++ L +FF +
Sbjct: 804 HDYAAILMFDRRYGTARIQSKLPEWIRRSLIS-APIGATISNLYTFFEE 851
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 5/72 (6%)
Query: 28 PYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCKLKNQ 87
PY PY Q+ FM + + ++ + + ESPTGTGKSLSL+C +L W ++ K
Sbjct: 11 PYSPYDIQVQFMRSLYTCIEECKV-----GIFESPTGTGKSLSLICGSLTWLRDHKRSVF 65
Query: 88 LANISHSKPDTE 99
L +I +S D E
Sbjct: 66 LEDIENSDGDDE 77
>sp|A3LN13|CHL1_PICST ATP-dependent RNA helicase CHL1 OS=Scheffersomyces stipitis (strain
ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545)
GN=CHL1 PE=3 SV=2
Length = 835
Score = 157 bits (398), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 173/725 (23%), Positives = 305/725 (42%), Gaps = 143/725 (19%)
Query: 92 SHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKKMTPT-IFYAS 150
S KP+ + +T + ES+ S + NG+T ++ M N P I+++S
Sbjct: 166 SEVKPNADKLT---------VLESEISQLLDKVNGRTDEIEMTND------CPVNIYFSS 210
Query: 151 RTHSQISQVI---------SEYKKTAYRVPMAVLASRKHYCTNKYVR----DKENIDEEC 197
RTHSQ++Q S +K R + SRK C N+ V+ + NI++ C
Sbjct: 211 RTHSQLNQFAHQLALTKFQSSFKGVEERTKYLPIGSRKQLCINEKVKSFSKNDSNINDVC 270
Query: 198 KLLLGDRNLGCPQF--KNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSM 255
L + GC QF K+ L ++HDIE++ ++G ++ C YY+ R
Sbjct: 271 VDLQKSKE-GC-QFLPKDYLNSSLTKKLSDLSLSKIHDIEEIADLGSNMKVCPYYSVRKG 328
Query: 256 ADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSV--------DI 307
+ +++ PY +++ R + + I+ +I+++DEAHN+ D SV I
Sbjct: 329 VEMTEIISLPYQILLSESTRAILNLQIEDSIVVIDEAHNLMDTITSMHSVCITIGEMNSI 388
Query: 308 DEDVLLKLQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRK-----ATLAKREFQHFFSC 362
+ + L L+++ S N + LI++ Q ++ +I++ + + +
Sbjct: 389 IKALKFYLGRFLKKLNSGNRIHLMKLIKLCQLVISFIQKSEKCNNIKVGNEINTSDIYQN 448
Query: 363 WTGDKALRELQEANISRQCFPILLECATKAI----KEATDTESELPHLSGMSVITLEGLF 418
TGD + EA +++ +E + + E T S P L + V L+ L
Sbjct: 449 STGDMLNIHILEAFLAKSKIAYKIESYMEKVAENENEQAKTSSSNPLLYKI-VQFLKCLV 507
Query: 419 SSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLS 478
+ S+ G D N ++ L+P+ VFKD+ +
Sbjct: 508 NP-----SKEGKFFWD----------------STNGITSIKYMLLDPSSVFKDIVSKARC 546
Query: 479 IILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDN---YP------ 529
+IL GT+ PM+ F + L P+V D ++ + PDN YP
Sbjct: 547 VILCGGTMEPMSEFKNFL---------FPYVEDKKIKSFSCNHIIPPDNLKVYPVSSQNN 597
Query: 530 ------------------LNASY-----KTADG-------YKLMEKLCNRWRETGQWSRL 559
L AS DG YK M + + W+ T +++
Sbjct: 598 VTLEFSFDNRNNPLMIEALGASIVRICQSVPDGVVVFFPSYKYMNHILSIWKSTDVLTQI 657
Query: 560 NAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENA 619
++K LF EP SQ + +L Y N+I + K A++ + + + +
Sbjct: 658 ESQKKLFEEPTSASQ--VQTILADYANTIKEEKKGAIL------------FSVVGGKMSE 703
Query: 620 NKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYNDTYRSSKNL------LSGNEWYCN 673
A L R ++VG+P+PN ++ K+K+ ++ ++ + +Y N
Sbjct: 704 GINFADELG--RAVVMVGLPYPNAYSGEIIAKRKFIESEAIARGCSMSEAQRNSQSYYEN 761
Query: 674 QAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYD-SFDASLEG 732
RA+NQ+IGR IRH DY I L+D R+Q R + +S W+RK I+ + + D +E
Sbjct: 762 LCMRAVNQSIGRSIRHINDYSIIYLVDCRYQSSRIQNKLSSWVRKRIETRNYNMDQIMEE 821
Query: 733 LKSFF 737
+ FF
Sbjct: 822 TRDFF 826
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 39/59 (66%), Gaps = 4/59 (6%)
Query: 28 PYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCKLKN 86
PY+PY Q+ M + T+D +G+ L ESPTGTGK+LS++CST+ W ++ K +N
Sbjct: 15 PYKPYDIQIQLMDAIYDTID----NGYKIGLFESPTGTGKTLSIICSTMTWLRDYKREN 69
>sp|A5DUW8|CHL1_LODEL ATP-dependent RNA helicase CHL1 OS=Lodderomyces elongisporus
(strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 /
NRRL YB-4239) GN=CHL1 PE=3 SV=1
Length = 892
Score = 151 bits (382), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 174/669 (26%), Positives = 282/669 (42%), Gaps = 114/669 (17%)
Query: 144 PT-IFYASRTHSQISQVISEYKKTAY---------RVPMAVLASRKHYCTNKYVRDK--- 190
PT IF+ SRTHSQ++Q S+ + T + R L SRK C N V+++
Sbjct: 254 PTKIFFTSRTHSQLNQFSSQLRLTKFDASFKDLEERTKYLPLGSRKQLCINDKVKNRKGE 313
Query: 191 ENIDEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKG----GCHEVHDIEDLVNVGQVVRG 246
++I++ C + L GC N S K ++ DIEDL ++G +
Sbjct: 314 QSINDAC-IDLQKTKKGCTYLPNPSNSSTISSATKEFADLSLAQIRDIEDLGDLGSSLHT 372
Query: 247 CSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVD 306
C YY+ R A+++ PY ++ R A+++DIK +I+I+DEAHNI D SV
Sbjct: 373 CPYYSVREGIKLAEVISLPYQLLLQSGSRDALKLDIKNSIIIIDEAHNIFDTLTSLYSVK 432
Query: 307 IDEDVL------LKLQME--LEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQ- 357
I L LK+ M L+++ S N + L ++ + L+ +++ A AK Q
Sbjct: 433 ITAAQLSRTIKALKIYMTKFLKKLNSGNRINLMKLTKLCKLLMDFLQSDLAKSAKLGDQV 492
Query: 358 ---HFFSCWTGDKALRELQEANISRQCFPILLECATKAIK-EATDTESELPHLSGMSVIT 413
F TGD EA +++ L+ + I E T+ +L S + +
Sbjct: 493 VGEEIFQGSTGDLVNIHKMEAYLNKSKIAFKLQSYMEKIGVEDVGTDFKLNSSSPI-LFD 551
Query: 414 LEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVA 473
+ L+Y + G D R + GG +L+ L+P VFK++
Sbjct: 552 IVKFLKCLSY-PKKEGKFFWD----------RIYGDNGGCEV-SLNYMLLDPCAVFKEIV 599
Query: 474 ELSLSIILTSGTLSPMNSFSSEL-------GVQFGTCLEAPHVI---------------- 510
+ + +IL GT+ P + F+ L ++ C H+I
Sbjct: 600 DQAKCVILCGGTMEPTSDFTDYLFPSIKHNKIKKFAC---GHIIPKNNLKVIPVGQYYGN 656
Query: 511 ---------DVDL-----QVLTSVISTGPDNYPLNASYKTADGYKLMEKLCNRWRETGQW 556
D+D + L + P + S Y+L+ + WRET +
Sbjct: 657 FDFLYNRRNDLDQFKRLGEFLIKICEIVPAGIVVFIS-----SYQLLSDIVKIWRETTIY 711
Query: 557 SRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQ 616
SRLN K +F E ++ +L Y I+ K A++ + G I
Sbjct: 712 SRLNLLKQVFEESVENTK--LTSLLSEYSYVINTQCKGAIL----LAVVGGKMSEGINFS 765
Query: 617 ENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYNDTYRSSKN------LLSGNEW 670
+N + R I+VG+P+PN ++ K+ + + +K E+
Sbjct: 766 DN----------LARAVIMVGMPYPNAFSGEIVAKRNFIEEQVITKGGTIQQARAKSYEY 815
Query: 671 YCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQ---YDSFD 727
Y N +A+NQ+IGR IRH DY IILLD R+Q + + +SKW+R I ++FD
Sbjct: 816 YDNLCMKAVNQSIGRSIRHAKDYAIIILLDYRYQTPKVQGKLSKWVRDRIANNTTANTFD 875
Query: 728 ASLEGLKSF 736
LE K F
Sbjct: 876 PFLETKKFF 884
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 45/77 (58%), Gaps = 12/77 (15%)
Query: 7 PNPNYRKPLNAYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTG 66
P+P+ R + +H PY PY QL FM + TL ++G+ + ESPTGTG
Sbjct: 5 PSPSARTCRDYHH--------PYDPYDIQLQFMDALYETL----QNGYKIGMFESPTGTG 52
Query: 67 KSLSLLCSTLAWQQNCK 83
K+LS++CS++ W ++ K
Sbjct: 53 KTLSIICSSMTWLRDYK 69
>sp|A7UXD4|CHL1_NEUCR ATP-dependent RNA helicase chl-1 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=chl-1 PE=3 SV=1
Length = 1073
Score = 150 bits (378), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 176/749 (23%), Positives = 299/749 (39%), Gaps = 173/749 (23%)
Query: 146 IFYASRTHSQISQVISEYKKTAYRVPMAV------------------LASRKHYCTNKYV 187
IFY SRTHSQ++Q I E ++ + P +V L+SR+ C N V
Sbjct: 336 IFYTSRTHSQLTQFIQELRRPEF--PASVPTPNPQEKPAKEIVKQIPLSSRQKLCINPTV 393
Query: 188 RDKEN---IDEECKLLL---GDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVG 241
I+E C+ L ++ CP N ++ + + DIEDL G
Sbjct: 394 NKLGTLAAINERCQSLQQPKTPKDQRCPYLPNAANLKATHEFRDTALATLPDIEDLYQTG 453
Query: 242 QVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARD 301
+ ++ C YYA+R+ A+++ PY ++ R A+ + ++G I+I+DEAHNI D +
Sbjct: 454 KQLQICPYYASRAAIPGAEVITLPYPLLLQKSAREALGIRLEGNIVIIDEAHNIMDAVSN 513
Query: 302 AGSVDIDEDVLLKLQMEL--------EQVCSVNPMIYQPLIEMTQDLVGWIERR--KATL 351
+ +I L + ++ L +++ N ++ L + + L +++ + KA L
Sbjct: 514 VHAAEIKYTDLKRAKLSLGMYYQRFHQKLTGENKVMVAQLQRVVEALGVYLKTKLDKAAL 573
Query: 352 AKREFQH--------FFSCWTGD-----KALRELQEANISRQCFPILLECATKAIKEATD 398
+ Q D K +R +QE+ ++ + + C +E D
Sbjct: 574 GLKADQEGIVLDTSLLLKTGGADQINLYKLIRYVQESKLAFKIEGYISYCE----EEGRD 629
Query: 399 TESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHT- 457
T+ E + + +L F + + S+ ++ +K P G
Sbjct: 630 TDDEEAETEIKARQGRPPVLHTLCSFLTALTNLSSEGRIFYEKI-----PPPRGELQDMK 684
Query: 458 LSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFG----TCLEAPHVIDVD 513
LS L+P F +AE + ++IL GT+SP + + L T L HVI D
Sbjct: 685 LSYMLLSPTHAFSSIAESARAVILAGGTMSPFEDYKAHLFPDVPPEKITTLSCGHVIPPD 744
Query: 514 LQVLTSVISTGPD-------------------NYP----------LNASYKTADG----- 539
+ ++ S P+ + P LN DG
Sbjct: 745 NLCVWTLGSIAPNPKVDTGIGEDCFDFTFAKRSNPNMINRLGLVLLNLCSVVPDGVVAFF 804
Query: 540 --YKLMEKLCNRWRETGQ-------WSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQ 590
Y +E++ W+ Q W RL +KK LF++ K S E L+ Y + I
Sbjct: 805 PSYGYLEEVIGVWKTHEQAMGPKTIWERLESKKALFIDSKTESSEQ---TLQKYSDVIHS 861
Query: 591 GSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNIND----- 645
+ RVK G L+ I + + + L C +VVG+P+PN +
Sbjct: 862 EVRPLSPAGSRVK--GAMLLSVIGGKMSEGINFSDRLGRC--VVVVGMPYPNPHSPEWLA 917
Query: 646 ----IQVSLKKKY----------------------NDTYRSSKNLLSGN----------- 668
++ + K+Y N T+ S+ S N
Sbjct: 918 RREYLEANFIKRYTASQQTSTATAPLPAPVIPPPSNTTHYSTNPSSSRNKDKHKPANVRK 977
Query: 669 -------EWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLR---- 717
++Y N RA+NQ+IGR IRH+ DY AI+L+D RF++E RA + W+R
Sbjct: 978 LAARDSHQFYENATLRAVNQSIGRAIRHQNDYAAIVLIDNRFEKEHVRAKLPGWIREGWD 1037
Query: 718 KSIKQYDSFDASLEGLKS-------FFRD 739
++ +Q +L+GL+ FFR+
Sbjct: 1038 ETQRQAKEDGKALKGLQGMMGRVNMFFRE 1066
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 53 GHCH-ALLESPTGTGKSLSLLCSTLAWQQNCKLKNQLANISHSKPDTEAVTDP 104
GH AL ESPTGTGKSLSL+C +L W +N K + I + EA +P
Sbjct: 146 GHAQIALFESPTGTGKSLSLICGSLTWLRNHKRLQFDSEIEKIQQQMEASGEP 198
>sp|A6ZWN8|CHL1_YEAS7 ATP-dependent RNA helicase CHL1 OS=Saccharomyces cerevisiae (strain
YJM789) GN=CHL1 PE=3 SV=1
Length = 861
Score = 145 bits (365), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 159/673 (23%), Positives = 292/673 (43%), Gaps = 133/673 (19%)
Query: 146 IFYASRTHSQISQVISEYKKTAY-----------RVPMAVLASRKHYCTNKYV---RDKE 191
I+YASRT+SQ+ Q S+ + ++ +V LAS+K C N V + E
Sbjct: 233 IYYASRTYSQLGQFTSQLRLPSFPSSFRDKVPNEKVKYLPLASKKQLCINPKVMKWKTLE 292
Query: 192 NIDEECKLLLGDRNLGCPQFKNVHKVRGHP---SLQKGGCHEVHDIEDLVNVGQVVRGCS 248
I++ C L + GC ++N ++ R P +L+ E+ DIEDLV +G+ + C
Sbjct: 293 AINDACADLRHSKE-GCMFYQNTNEWRHCPDTLALRDMIFSEIQDIEDLVPLGKSLGICP 351
Query: 249 YYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDID 308
YYA+R A++V PY Y+++ R +++++++ +I+I+DEAHN+ + S I
Sbjct: 352 YYASREALPIAEVVTLPYQYLLSESTRSSLQINLENSIVIIDEAHNLIETINSIYSSQIS 411
Query: 309 -EDV----------LLKLQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKR-EF 356
ED+ K + L VN + L+ MT L+ +I + + + +
Sbjct: 412 LEDLKNCHKGIVTYFNKFKSRLNPGNRVNLLKLNSLL-MT--LIQFIVKNFKKIGQEIDP 468
Query: 357 QHFFSCWTGD-----KALRELQEANISRQCFPILLECATKAIKEATDTESELP-HLSGMS 410
F+ D K LR ++ + I+ + ++ +A+KE +++E P +
Sbjct: 469 NDMFTGSNIDTLNIHKLLRYIKVSKIAYK-----IDTYNQALKEEESSKNENPIKETHKK 523
Query: 411 VITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFK 470
++ + L ++ F + S+ Q +K +++ L P+ F+
Sbjct: 524 SVSSQPLLFKVSQFLYCLTNLTSEGQFFFEK-------------NYSIKYMLLEPSKPFE 570
Query: 471 DVAELSLSIILTSGTLSPMNSFSSELGVQFG----TCLEAPHVIDVD------------- 513
+ + ++L GT+ PM+ F S L + T L HVI +
Sbjct: 571 SILNQAKCVVLAGGTMEPMSEFLSNLLPEVPSKDITTLSCNHVIPKENLQTYITNQPELE 630
Query: 514 ----------------LQVLTSVISTGPDNYPLNASYKTADGYKLMEKLCNRWRETGQWS 557
Q + P + A + + Y+ + + W++ +++
Sbjct: 631 FTFEKRMSPSLVNNHLFQFFVDLSKAVPKKGGIVAFFPS---YQYLAHVIQCWKQNDRFA 687
Query: 558 RLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSK---CAVVRKKRVKREGNNDLNTIE 614
LN + +F E K G +L Y +S+++G A+V K EG I
Sbjct: 688 TLNNVRKIFYEAKDGDD-----ILSGYSDSVAEGRGSLLLAIVGGKL--SEG------IN 734
Query: 615 SQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSG------- 667
Q++ +CR ++VG+PFPNI ++ +K+K + ++K + SG
Sbjct: 735 FQDD----------LCRAVVMVGLPFPNIFSGELIVKRK----HLAAKIMKSGGTEEEAS 780
Query: 668 ---NEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYD 724
E+ N +A+NQ++GR IRH DY I LLD R+ R +S+W++ SI
Sbjct: 781 RATKEFMENICMKAVNQSVGRAIRHANDYANIYLLDVRYNRPNFRKKLSRWVQDSINSEH 840
Query: 725 SFDASLEGLKSFF 737
+ + + FF
Sbjct: 841 TTHQVISSTRKFF 853
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 46/79 (58%), Gaps = 7/79 (8%)
Query: 28 PYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCK---L 84
PY+PY Q+ M T+ R +G A+LESPTGTGK+LSL+C+T+ W + K
Sbjct: 13 PYKPYDIQVQLM----ETVYRVLSEGKKIAILESPTGTGKTLSLICATMTWLRMNKADIF 68
Query: 85 KNQLANISHSKPDTEAVTD 103
NI ++ D+E ++D
Sbjct: 69 TRMETNIKTNEDDSENLSD 87
>sp|P22516|CHL1_YEAST ATP-dependent RNA helicase CHL1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=CHL1 PE=1 SV=1
Length = 861
Score = 145 bits (365), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 159/673 (23%), Positives = 292/673 (43%), Gaps = 133/673 (19%)
Query: 146 IFYASRTHSQISQVISEYKKTAY-----------RVPMAVLASRKHYCTNKYV---RDKE 191
I+YASRT+SQ+ Q S+ + ++ +V LAS+K C N V + E
Sbjct: 233 IYYASRTYSQLGQFTSQLRLPSFPSSFRDKVPDEKVKYLPLASKKQLCINPKVMKWKTLE 292
Query: 192 NIDEECKLLLGDRNLGCPQFKNVHKVRGHP---SLQKGGCHEVHDIEDLVNVGQVVRGCS 248
I++ C L + GC ++N ++ R P +L+ E+ DIEDLV +G+ + C
Sbjct: 293 AINDACADLRHSKE-GCIFYQNTNEWRHCPDTLALRDMIFSEIQDIEDLVPLGKSLGICP 351
Query: 249 YYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDID 308
YYA+R A++V PY Y+++ R +++++++ +I+I+DEAHN+ + S I
Sbjct: 352 YYASREALPIAEVVTLPYQYLLSESTRSSLQINLENSIVIIDEAHNLIETINSIYSSQIS 411
Query: 309 -EDV----------LLKLQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKR-EF 356
ED+ K + L VN + L+ MT L+ +I + + + +
Sbjct: 412 LEDLKNCHKGIVTYFNKFKSRLNPGNRVNLLKLNSLL-MT--LIQFIVKNFKKIGQEIDP 468
Query: 357 QHFFSCWTGD-----KALRELQEANISRQCFPILLECATKAIKEATDTESELP-HLSGMS 410
F+ D K LR ++ + I+ + ++ +A+KE +++E P +
Sbjct: 469 NDMFTGSNIDTLNIHKLLRYIKVSKIAYK-----IDTYNQALKEEESSKNENPIKETHKK 523
Query: 411 VITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFK 470
++ + L ++ F + S+ Q +K +++ L P+ F+
Sbjct: 524 SVSSQPLLFKVSQFLYCLTNLTSEGQFFFEK-------------NYSIKYMLLEPSKPFE 570
Query: 471 DVAELSLSIILTSGTLSPMNSFSSELGVQFG----TCLEAPHVIDVD------------- 513
+ + ++L GT+ PM+ F S L + T L HVI +
Sbjct: 571 SILNQAKCVVLAGGTMEPMSEFLSNLLPEVPSEDITTLSCNHVIPKENLQTYITNQPELE 630
Query: 514 ----------------LQVLTSVISTGPDNYPLNASYKTADGYKLMEKLCNRWRETGQWS 557
Q + P + A + + Y+ + + W++ +++
Sbjct: 631 FTFEKRMSPSLVNNHLFQFFVDLSKAVPKKGGIVAFFPS---YQYLAHVIQCWKQNDRFA 687
Query: 558 RLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSK---CAVVRKKRVKREGNNDLNTIE 614
LN + +F E K G +L Y +S+++G A+V K EG I
Sbjct: 688 TLNNVRKIFYEAKDGDD-----ILSGYSDSVAEGRGSLLLAIVGGKL--SEG------IN 734
Query: 615 SQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSG------- 667
Q++ +CR ++VG+PFPNI ++ +K+K + ++K + SG
Sbjct: 735 FQDD----------LCRAVVMVGLPFPNIFSGELIVKRK----HLAAKIMKSGGTEEEAS 780
Query: 668 ---NEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYD 724
E+ N +A+NQ++GR IRH DY I LLD R+ R +S+W++ SI
Sbjct: 781 RATKEFMENICMKAVNQSVGRAIRHANDYANIYLLDVRYNRPNFRKKLSRWVQDSINSEH 840
Query: 725 SFDASLEGLKSFF 737
+ + + FF
Sbjct: 841 TTHQVISSTRKFF 853
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 46/79 (58%), Gaps = 7/79 (8%)
Query: 28 PYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCK---L 84
PY+PY Q+ M T+ R +G A+LESPTGTGK+LSL+C+T+ W + K
Sbjct: 13 PYKPYDIQVQLM----ETVYRVLSEGKKIAILESPTGTGKTLSLICATMTWLRMNKADIF 68
Query: 85 KNQLANISHSKPDTEAVTD 103
NI ++ D+E ++D
Sbjct: 69 TRMETNIKTNEDDSENLSD 87
>sp|A2QY22|CHL1_ASPNC ATP-dependent RNA helicase chl1 OS=Aspergillus niger (strain CBS
513.88 / FGSC A1513) GN=chl1 PE=3 SV=1
Length = 874
Score = 143 bits (361), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 184/761 (24%), Positives = 298/761 (39%), Gaps = 186/761 (24%)
Query: 79 QQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNV 138
+++ K +++LA+ S P T + + + Q ST P ++ +N V
Sbjct: 156 EEHSKPRDELAHTSELSPSTLELLERF--------KGQISTAKPGSDD------ADNDEV 201
Query: 139 KKKMTPTIFYASRTHSQISQVISEYKKTAY---------------------RVPMAVLAS 177
K IFY SRTHSQ++Q E ++ RV L S
Sbjct: 202 K------IFYCSRTHSQLTQFAGELRRVKMPWSIPKDLLSTDLTGEEELEERVKHVTLGS 255
Query: 178 RKHYCTNKYVRDKEN---IDEECKLLLGDRNLG----CPQFKNVHKVRGHPSLQKGGCHE 230
RK+ C N V EN I+E C L L N+ CP + R +
Sbjct: 256 RKNLCINPRVSSLENATAINERC-LDLQQPNVNPQHRCPFLPSKEDERQVLQFRDHALST 314
Query: 231 VHDIEDLVNVGQVVRGCSYYAARSMADDA------------------QLVFCPYSYIINP 272
V DIEDL +G+ + C YYA+RS+ D+ Q+V PY ++
Sbjct: 315 VKDIEDLGKLGKKIGICPYYASRSVVKDSEVCCLRARSSIDLVPDEWQIVTLPYPLLLQR 374
Query: 273 VIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMELEQVC--------- 323
R A+ +KG ++I+DEAHN+ D + SV + L +LQ L Q+
Sbjct: 375 SAREALNSSVKGHVIIIDEAHNLMDAISNIHSVTV---TLSQLQTSLSQLTIYGRKFKTR 431
Query: 324 ------SVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGD-----KALREL 372
S + + L + L +E KA S D K R L
Sbjct: 432 LKGKNRSYVAQVIRLLSSIAAHLRSLLESGKAPEGPVLISELMSGKGVDQINPYKLSRYL 491
Query: 373 QEANISRQCFPILLECATKAIKEATD--TESELPHLSGMSVITLEGLFSSLTYFFSRNGS 430
QE+ ++R+ + + K+A+ T L H+ G +++L + F+S+
Sbjct: 492 QESKLARKVDGYVEFTRDPSDKQASRSPTVPVLFHIQGF-LLSLMNPSAEGRLFYSKEQ- 549
Query: 431 HVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMN 490
D QL KY+ L+P F+++ E + +IIL GT+SPM
Sbjct: 550 --GDIQL---KYM------------------LLDPTNQFRELVEDARAIILAGGTMSPMT 586
Query: 491 SFSSELGVQFGT----CLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTAD-------- 538
+ + L HVI + ++ + G + +Y D
Sbjct: 587 DYMNHLFSYVPASRLDTFSYGHVIPPE-NLIAHTLVRGVQGSEFDFTYDARDSEKMIMDL 645
Query: 539 --------------------GYKLMEKLCNRWR-----ETGQ--WSRLNAKKPLFVEPKG 571
Y + ++ N W+ E GQ ++ + KKP+ E +
Sbjct: 646 GRTIATLCHVIPDGVVAFFPSYDYLGRVLNIWKKPMLGEQGQTVYNLIGQKKPILSESRD 705
Query: 572 GSQEDFEIVLKHYYNSISQGSKCAVVRKKRVK-REGNNDLNTIESQENANKKGASFLAVC 630
+ E+ L Y N++ G ++ K EG N ++K G
Sbjct: 706 MTVTTEEL-LHTYANTVDSGRGALLLSVVGGKLSEGIN---------FSDKLG------- 748
Query: 631 RGKIVVGIPFPNINDIQVSLKKKY-----------NDTYRSSKNLLSGNEWYCNQAFRAL 679
RG ++VG+PFPNI K +Y ++ R +G ++Y N RA+
Sbjct: 749 RGVLIVGLPFPNIRSAVWQAKIQYIEQKTHQQATGSEASRQLAAKAAGRDFYENSCMRAV 808
Query: 680 NQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSI 720
NQ IGR IRHR DY AI+L+D R+++ +A + W+++S+
Sbjct: 809 NQCIGRAIRHRNDYAAIVLVDRRYEKPGIQAKLPAWIKQSM 849
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 5/56 (8%)
Query: 28 PYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCK 83
PY PY QL M + S L++ + A+ ESPTGTGKSLSL+C +L W ++ K
Sbjct: 11 PYSPYDIQLQLMRALYSCLEQGKV-----AVFESPTGTGKSLSLICGSLTWLRDHK 61
>sp|A8MPP1|D11L8_HUMAN Putative ATP-dependent RNA helicase DDX11-like protein 8 OS=Homo
sapiens GN=DDX11L8 PE=3 SV=1
Length = 907
Score = 141 bits (356), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 171/740 (23%), Positives = 287/740 (38%), Gaps = 214/740 (28%)
Query: 146 IFYASRTHSQISQVISEYKKTAY--RVPMAVLASRKHYCTNKYVRD---KENIDEECKLL 200
I++ SRTHSQ++Q + E KK+ + V + L SR++ C N+ VR + I++ C +
Sbjct: 231 IYHCSRTHSQLAQFVHEVKKSPFGKDVRLVSLGSRQNLCVNEDVRSLGSVQLINDRCVDM 290
Query: 201 LGDRNL-------------------GCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVG 241
R+ CP F N H+ G L+ EV D+E L+ +G
Sbjct: 291 QRSRHEKKKGAEEEKPKRRRQEKQAACP-FYN-HEQMG--LLRDEALAEVKDMEQLLALG 346
Query: 242 QVVRGCSYYAARSMADDAQLVFCPYSYIINPV-------------------------IRG 276
+ R C YY +R A+LV PY +++ I G
Sbjct: 347 KEARACPYYRSRLAIPAAKLVVLPYQMLLHAATRQAAGIRLQDQVVIIDEAHNLIDTITG 406
Query: 277 AMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQMEL----------------- 319
V++ G+ L + ++ + R + + LK + L
Sbjct: 407 MHSVEVSGSQLCQAHSQLLQYMERYGKRLKAKNLMYLKQILYLLEKFVAVLGGNIKQNPN 466
Query: 320 --------EQVCSVNPMIYQPLIE---------------MTQDLVGWIERRKATLAKRE- 355
++ ++N ++Q I+ +++ L G+ ER A + RE
Sbjct: 467 TQSLSQTGTELKTINDFLFQSQIDNINLFKVQRYCEKSMISRKLFGFTERYGAVFSSREQ 526
Query: 356 -----FQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMS 410
FQ F L+ LQ P A ++++ +P +
Sbjct: 527 PKLAGFQQF---------LQSLQPRTTEALAAP------------ADESQASVPQPAS-P 564
Query: 411 VITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFK 470
++ +EG ++LT +++G + Q +L + TL LNPAV F
Sbjct: 565 LMHIEGFLAALTTA-NQDGRVILSRQGSLSE--------------STLKFLLLNPAVHFA 609
Query: 471 DVAELSLSIILTSGTLSPMNSFSSEL----GVQFGTCLE--APHVIDVDLQVLTSVISTG 524
V + ++++ GT+ P++ F +L GV+ +E HVI D + VI +G
Sbjct: 610 QVVKECRAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHVIPPD--NIPLVICSG 667
Query: 525 PDNYPLNASYKTADGYKLMEK----LCN------------------------RWRETGQW 556
N PL +++ D ++M++ LCN W + G
Sbjct: 668 ISNQPLEFTFQKRDLPQMMDEVGRILCNLCGVVSGGVVCFFSSYEYLRQVHAHWEKGGLL 727
Query: 557 SRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQ 616
RL A+K +F EPK Q E VL Y I C Q
Sbjct: 728 GRLAARKKIFQEPKSAHQ--VEQVLLAYSRCIQ---ACG--------------------Q 762
Query: 617 ENANKKGASFLAVCRGK---------------IVVGIPFPNINDIQVSLKKKYNDTY--R 659
E A L+V GK ++VG+PFPNI ++ K Y D R
Sbjct: 763 ERGQVTEALLLSVVGGKMSEGINFSDNLGRCVVMVGMPFPNIRSAELQEKMAYLDQTLPR 822
Query: 660 SSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKS 719
+ G N +A+NQ+IGR IRH+ D+ +I+LLD+R+ A + W+R S
Sbjct: 823 APGQAPPGKALVENLCMKAVNQSIGRAIRHQKDFASIVLLDQRYARPPVLAKLPAWIRAS 882
Query: 720 IKQYDSFDASLEGLKSFFRD 739
++ +F ++ ++ F R+
Sbjct: 883 VEVKATFGPAIAAVQKFHRE 902
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 40/68 (58%), Gaps = 5/68 (7%)
Query: 20 VGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQ 79
VG I FP+ PY Q FM + L+ A + G + ESPTGTGKSLSL+C L+W
Sbjct: 8 VGAIHFPFPFTPYSIQEDFMAELYRVLE-AGKIG----IFESPTGTGKSLSLICGALSWL 62
Query: 80 QNCKLKNQ 87
++ + K +
Sbjct: 63 RDFEQKKR 70
>sp|Q6BZD9|CHL1_DEBHA ATP-dependent RNA helicase CHL1 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=CHL1 PE=3 SV=2
Length = 820
Score = 138 bits (348), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 161/674 (23%), Positives = 288/674 (42%), Gaps = 132/674 (19%)
Query: 146 IFYASRTHSQISQVISEYKKTAY---------RVPMAVLASRKHYCTNKYVRDKEN---I 193
IF++SRTHSQ+SQ + T + R+ + LASRK C + + N I
Sbjct: 193 IFFSSRTHSQLSQFSHQLNMTEFESSLDNIPERIKFSPLASRKQLCIHPKISKLSNVSSI 252
Query: 194 DEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGG---CHEVHDIEDLVNVGQVVRGCSYY 250
++ C L C +H + ++K ++HDIEDL +G ++ C YY
Sbjct: 253 NDACIDLQQSSKNSCEYIPKLHNTQSEEIVKKFSDLSFTKIHDIEDLGKLGNKLKICPYY 312
Query: 251 AARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSV----- 305
+ R D +++ PY ++ R A+ ++I +I+I+DEAHN+ D+ SV
Sbjct: 313 SVRKGIDVTEIIALPYQMLLQDSTRSALNLNIDDSIIIIDEAHNLLDVISSIYSVSITSN 372
Query: 306 ---DIDEDVLLKLQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQH---- 358
DI + + L ++++ S N + LI++ Q L +I + + +H
Sbjct: 373 ELSDITKSLKFYLNKFIKRLNSGNRINIMKLIKLCQVLEKFIS---SNSKDGKIKHGDEI 429
Query: 359 ----FFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVITL 414
F TGD NI + +E K A ES + L+ I
Sbjct: 430 ITSDIFEGTTGDL-------VNIHK------IEQFLNKSKIAYKIESYMQKLNDSESI-- 474
Query: 415 EGLFSSLTYFFSRNGSHVSDYQLA-LQKYIKRDSKNPGGNWTHT-----LSLWCLNPAVV 468
+N S+ +++ K + SK W T ++ L+P+ +
Sbjct: 475 ------------KNRSNPLLFKITKFLKCLTNPSKEGKFFWDKTNDSVSINYMLLDPSEI 522
Query: 469 FKDVAELSLSIILTSGTLSPMNSFSSEL-------GVQFGTCLEAPHVI-DVDLQVL--- 517
F+D+ + + ++L GT+ PMN +++ L ++ +C H+I +L+V
Sbjct: 523 FRDIVKRARCVLLCGGTMEPMNDYTNYLFPYIPPEQIKKFSC---GHIIPQENLEVFPIG 579
Query: 518 -----------------TSVISTGPDNYPLNASYKTADG-------YKLMEKLCNRWRET 553
+I G + LN T DG YK + + N WR+
Sbjct: 580 NYNDISFEFSFDKRNNSKMIIELG--HAILNIIESTPDGIVIFFPSYKYLNVVMNVWRQN 637
Query: 554 GQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTI 613
L K +F EP+ S+ E VL Y+S ++ K + + V + + +N
Sbjct: 638 KIIESLTKVKAIFQEPEDSSK--VEKVLND-YSSTNKSEKHSALLLSVVGGKMSEGINFS 694
Query: 614 ESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYNDTYRSSKN------LLSG 667
+ + RG I++G+PFPNI ++ K+K+ + +K +++
Sbjct: 695 DE-------------LARGVIMIGLPFPNIFSAELIAKRKFIEESTIAKGGTKSQAMVNA 741
Query: 668 NEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSI---KQYD 724
+Y N RA+NQ+IGR IRH+ DY I L D+R+ ++ + +S W+++ + +
Sbjct: 742 KNFYENICMRAVNQSIGRSIRHKNDYSIIYLFDQRYGSDKIQDKLSGWVKQKLFTRGRCT 801
Query: 725 SFDASLEGLKSFFR 738
F+ ++ + FFR
Sbjct: 802 DFNQVIKETQDFFR 815
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 5/56 (8%)
Query: 28 PYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCK 83
P++PY Q+ M + +D + L ESPTGTGK+LSL+CS++ W + K
Sbjct: 19 PFEPYDIQIQLMDAIYDAID-----NYKIGLFESPTGTGKTLSLICSSMTWLREYK 69
>sp|A1CJ34|CHL1_ASPCL ATP-dependent RNA helicase chl1 OS=Aspergillus clavatus (strain
ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1)
GN=chl1 PE=3 SV=1
Length = 731
Score = 137 bits (345), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 161/690 (23%), Positives = 279/690 (40%), Gaps = 136/690 (19%)
Query: 144 PTIFYASRTHSQISQVISEYKKTAY--------------------RVPMAVLASRKHYCT 183
P IFY SRTHSQ++Q SE ++ RV L SRK+ C
Sbjct: 75 PKIFYCSRTHSQLAQFASELRRVEMPPSLPKELSEKLTDSEALEERVKHLSLGSRKNLCI 134
Query: 184 NKYVRDKEN---IDEECKLLLGDRNLGCPQFKNVHKVRGHPS---------LQKGGCHEV 231
N V EN I+E C +L P H+ PS + V
Sbjct: 135 NPRVMKLENATAINERCM------DLQQPGMAVEHRCPYLPSKDDEPQVLQFRDHTLATV 188
Query: 232 HDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDE 291
DIED+ +G+ + C YYA+RS+ +++V PY ++ R A+ + IK I+I+DE
Sbjct: 189 KDIEDMGKLGKHIGVCPYYASRSVIKHSEIVTLPYPLLLQRSAREALGLSIKNHIVIIDE 248
Query: 292 AHNIEDIARDAGSVDIDEDVLLKLQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATL 351
AHN+ D + SV I L +LQ + Q+ + L + + + R +++
Sbjct: 249 AHNLMDAISNIHSVTI---TLSQLQTAIFQLTTYARKFKTRLKGKNRTYIAQVIRLVSSV 305
Query: 352 AK--REFQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGM 409
A R Q G +L Q P L + K A + + +
Sbjct: 306 ADHLRSIQGSNQPPDGAVKTSDLMAGKGVDQINPYKLSHYLQESKLARKVDGYVEYSKDT 365
Query: 410 SVITLEGLFSSLTYFFSRNGSHVSDYQLALQK-------YIKRDSKNPGGNWTHTLSLWC 462
+ G S+ F HV + L L + +D + L
Sbjct: 366 ANRQSHGKPSTPVLF------HVQSFLLPLMNPSAEGRLFYMKDQNDI------QLKYLL 413
Query: 463 LNPAVVFKDVAELSLSIILTSGTLSPMNSFSSEL-----GVQFGTCLEAPHVIDVDLQVL 517
L+P F+++ E + ++IL GT+SPM+ + + L + T HVI + ++
Sbjct: 414 LDPTNHFREIVEDARAVILAGGTMSPMSDYMNHLFPYVPASRLDT-FSYGHVIPPE-NLV 471
Query: 518 TSVISTGPDNYPLNASYKTAD----------------------------GYKLMEKLCNR 549
++ G + +Y++ D Y + ++ +
Sbjct: 472 AHTLAQGVMGCAFDFTYESRDSEKMIIDLGRTVATLCQAIPDGVVAFFPSYDYLSRILHI 531
Query: 550 WRETGQWSR-------LNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRV 602
W++ + + KKP+ E + + + +I L+ Y +I GS +
Sbjct: 532 WKKPLGADKNQTILGLIERKKPILYESRDMTTKSDDI-LQEYTRTIDSGSGALL------ 584
Query: 603 KREGNNDLNTIESQENANKKGASFL-AVCRGKIVVGIPFPNIND------IQVSLKKKY- 654
L+ I + + +G +F + RG +++G+PFPNI +Q +K Y
Sbjct: 585 -------LSVIGGKLS---EGINFSDRLGRGVLIIGLPFPNIRSAVWQAKLQYVEQKAYS 634
Query: 655 ----NDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRA 710
++T R +G ++Y N RA+NQ IGR IRHR DY AI+++D R+ + +
Sbjct: 635 GSSGSETDRQMIAKAAGRDFYENACMRAVNQCIGRAIRHRNDYAAIVMIDRRYDKPNIQG 694
Query: 711 HISKWLRKSIKQYDS---FDASLEGLKSFF 737
+ W+++S+ + + A+++ L FF
Sbjct: 695 KLPAWIKQSMVRSPTQRPAGATVQNLIKFF 724
>sp|Q2U587|CHL1_ASPOR ATP-dependent RNA helicase chl1 OS=Aspergillus oryzae (strain ATCC
42149 / RIB 40) GN=chl1 PE=3 SV=1
Length = 721
Score = 135 bits (339), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 184/813 (22%), Positives = 328/813 (40%), Gaps = 213/813 (26%)
Query: 28 PYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCKLKNQ 87
PY PY QL FM + S +++ + A+ ESPTG LS TL + + K+
Sbjct: 11 PYSPYDIQLQFMRALYSCIEKGKV-----AVFESPTGKLAGLS--TGTLELLKRFQHKSS 63
Query: 88 LANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKKMTPTIF 147
+H + D + ++++K I
Sbjct: 64 ----AHPRQDED---------------------------------YGDEDIK------IL 80
Query: 148 YASRTHSQISQVISEYKKTAYRVPMAV----------------------LASRKHYCTNK 185
Y SRTHSQ++Q SE ++ +P ++ L SRK+ C N
Sbjct: 81 YCSRTHSQLTQFASELRRV--NMPSSIPKDFSEGVADTDGLQEGVRHLSLGSRKNLCINP 138
Query: 186 YVRDKENIDEECKLLLGDRNLG------CPQF------KNVHKVRGHPSLQKGGCHEVHD 233
V +N+ + L + G CP V + R H V D
Sbjct: 139 RVSSLDNVTAISERCLDMQQPGVAAEQRCPFLPSNENEAQVLQFRDHV------LATVKD 192
Query: 234 IEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAH 293
IED+ +G+ + C YYA+RS+ +++V PY ++ R A+++ IKG ++++DEAH
Sbjct: 193 IEDIGKLGKDIGICPYYASRSVTKHSEIVTLPYPLLLQRSARDALDLSIKGHVVVIDEAH 252
Query: 294 NIEDIARDAGSVDIDEDVLLKLQMELEQVCSVN---------------PMIYQPLIEMTQ 338
N+ D + SV I L +LQ L Q+ + + + + +T
Sbjct: 253 NLMDAISNIHSVTI---TLSELQTSLFQLTTYARKFKTRLKGKNRNYIAQVIRLVTSITD 309
Query: 339 DLVGWIERRKATLAKREFQHFFSCWTGD-----KALRELQEANISRQCFPILLECATKAI 393
L +E +A + S D K R L+E+ ++R+ ++ ++
Sbjct: 310 HLKTILETSQAPEGPVQPSDLMSGKGVDQINPYKLCRYLRESKLARK-----VDGYSEFS 364
Query: 394 KEATDTESE-------LPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRD 446
+E D +++ L H+ ++ L L + F+ + D QL KY+ D
Sbjct: 365 RERADRQADRKPSTPVLFHIQSF-LLPLMNLSAEGKLFYIKAQ---GDIQL---KYMLLD 417
Query: 447 SKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSEL-----GVQFG 501
N F+++ + + ++IL GT+SPM + L + G
Sbjct: 418 PMNQ------------------FREIVDDARAVILAGGTMSPMTDYIHHLFPYVPSSRLG 459
Query: 502 TCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTAD---------------GYKLMEKL 546
T HVI + ++ V+ G + +++T D Y + ++
Sbjct: 460 T-FSYGHVIPPE-NLIAQVLGKGVTGTEFDFTFETRDSERMVIPDGVVAFFPSYDYLSQV 517
Query: 547 CNRWRET--GQWSR-----LNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRK 599
+ W+ T G+ +R + KK + E + + E++ + Y SI + A++
Sbjct: 518 LSIWKRTLAGEKNRTVYDLIEGKKTILHESRDVTISTEELLQE--YASIVGSGRGALL-- 573
Query: 600 KRVKREGNNDLNTIESQENANKKGASFL-AVCRGKIVVGIPFPNIND------IQVSLKK 652
L+ + + + +G +F + RG ++VG+PFPNI I +K
Sbjct: 574 ----------LSVVGGKLS---EGINFSDRLGRGVLIVGLPFPNIRSAVWQAKIHYVEQK 620
Query: 653 KYNDTYRSSKNL-----LSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEER 707
Y ++ S N +G ++Y N RA+NQ IGR IRHR DY AI+L+D R+ +
Sbjct: 621 AYKESSGSDANRQLVAKAAGKDFYENSCMRAVNQCIGRAIRHRNDYAAIVLMDRRYDKPA 680
Query: 708 NRAHISKWLRKSIKQYDSF---DASLEGLKSFF 737
+ + W+++S+ + A++ L FF
Sbjct: 681 IQGKLPAWIKQSMASSSALRPAGATIGSLSKFF 713
>sp|Q5AD67|CHL1_CANAL ATP-dependent RNA helicase CHL1 OS=Candida albicans (strain SC5314
/ ATCC MYA-2876) GN=CHL1 PE=3 SV=1
Length = 842
Score = 134 bits (337), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 161/647 (24%), Positives = 273/647 (42%), Gaps = 110/647 (17%)
Query: 146 IFYASRTHSQISQVISEYKKTAY---------RVPMAVLASRKHYCTNKYVRDKEN---I 193
IF++SRTHSQ++Q S+ + T + R L SRK C N+ VR K N +
Sbjct: 203 IFFSSRTHSQLNQFSSQLRLTNFQASFEDLEERTKYIPLGSRKQLCINEKVRSKGNDQSV 262
Query: 194 DEECKLLLGDRNLGCPQF-KNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAA 252
++ C L + N GC KN ++ DIEDL +G + C YY+
Sbjct: 263 NDACLDLQRETN-GCQYLPKNYMMSSVTKEFADLSLAKIRDIEDLNELGIELNICPYYSV 321
Query: 253 RSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVL 312
R + +++ PY I R + +DIK +I+I+DEAHNI D+ S+ I D L
Sbjct: 322 RKGIEMTEIISLPYQMIFQDTTRKILNLDIKDSIIIIDEAHNIIDVITSMYSIKITSDQL 381
Query: 313 ------LKLQME--LEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLA---KREFQHFFS 361
LK+ + L+++ S N + LI++ Q L+ ++ + + + Q F
Sbjct: 382 NKVIKSLKIYLNKFLKRLNSGNRINLMKLIKICQILLKFLNTNSEKVKSGDEVQIQDIFK 441
Query: 362 CWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMS----------- 410
TGD + +++ +E + + TD + ++
Sbjct: 442 DSTGDLVNIHKLDQFLTKSKIAYKIESYIEKTEMETDNGEKKGRITNSGGSSSSSSSSNP 501
Query: 411 -VITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVF 469
+ T+ +LT S+ G D + N T +L+ L+P+ VF
Sbjct: 502 LLFTIIKFLRTLTN-LSKEGKFFWDNE----------------NGTISLNYMLLDPSAVF 544
Query: 470 KDVAELSLSIILTSGTLSPMNSFSSELGVQFGT----CLEAPHVI-DVDLQVLTSVISTG 524
K++ + + ++L GT+ PM+ + L T HVI +LQV IS
Sbjct: 545 KEIVDQAKCVLLCGGTMEPMSDYMDYLFPSVPTNKINTFACGHVIPKENLQVFP--ISQW 602
Query: 525 PDN--------------------YPLNASYKTADG-------YKLMEKLCNRWRETGQWS 557
D + + + + G YK ++++ WR+T +
Sbjct: 603 NDTNFEFSYQKRNDSKQLMALGEFLIEITKRVPYGVVIFFPSYKYLDQVLQFWRDTKILT 662
Query: 558 RLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQE 617
+ ++K +F EPK S + E VL Y I K A++ + + +
Sbjct: 663 SIESEKTIFREPKDPS--NVEKVLNEYGYLIQTERKGAIL------------FSVVGGKM 708
Query: 618 NANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSGN------EWY 671
+ + LA R I+VG+P+PN ++ K+KY +T S + + +Y
Sbjct: 709 SEGINFSDDLA--RAVIMVGLPYPNAYSGEMVTKRKYIETSELSNGGTTTDAKEKSRNYY 766
Query: 672 CNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRK 718
N RA+NQ+IGR IRH DY I L+D RF R + +S+W+++
Sbjct: 767 ENLCMRAVNQSIGRSIRHINDYSIIYLVDRRFSTPRIQNKLSQWVKE 813
Score = 55.1 bits (131), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 28 PYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCKLKNQ 87
PY PY Q+ M + +T++ +G+ L ESPTGTGK+LS++CS++ W + K N
Sbjct: 13 PYTPYDIQIQLMDAIYNTIE----NGYKIGLFESPTGTGKTLSIICSSMTWLRTFKRNNT 68
Query: 88 LANISHSKPDT 98
++ D
Sbjct: 69 FLETNNEVEDV 79
>sp|Q6CIF0|CHL1_KLULA ATP-dependent RNA helicase CHL1 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=CHL1 PE=3 SV=1
Length = 807
Score = 131 bits (329), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 155/635 (24%), Positives = 274/635 (43%), Gaps = 91/635 (14%)
Query: 137 NVKKKMTPTIFYASRTHSQISQVISEYKKTAY----------RVPMAVLASRKHYCTNKY 186
N++ K I+++SRTHSQ++Q S+ ++ R+ LASRK C +
Sbjct: 194 NMELKSPLKIYFSSRTHSQLTQFASQLTLPSFPPSSPTLEKERIKFLPLASRKQLCIHAK 253
Query: 187 VRDKEN--IDEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVV 244
V ++ I++ C + + C + N + + E+ DIEDLV +G +
Sbjct: 254 VSKLKSDLINDACVETVKRQE--CQFYTNSRDLISSKQFRDYTFSEISDIEDLVQLGHSL 311
Query: 245 RGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIARDAGS 304
C YY++R+ + A++V PY +I++ IR ++ +++K +I+I+DEAHN+ D S
Sbjct: 312 HVCPYYSSRTALEGAEIVTLPYQHILSFEIRESLGINLKDSIVIIDEAHNLMDTITSIYS 371
Query: 305 VDID-EDV----------LLKLQMELEQVCSVNPMIYQPLIEMTQDLV-GWIERRKATLA 352
+I D+ L K + +L VN M L+++ Q + E+ K
Sbjct: 372 CEISLSDIKICKKLMKIYLNKFKRKLNGKNRVNIMKLMKLLDILQAFIESHFEKGKEISP 431
Query: 353 KREFQHFFSCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTES-ELPHLSGMS- 410
+ F+ + L S+ + I +K + ++T S + P L +S
Sbjct: 432 QSMFRDSNADLLNIHELVTYMRG--SKIAYKIDSYADSKLKSDESNTNSVKQPILFKISK 489
Query: 411 -VITLEGLFSSLTYFFSRNGSHVSDYQLA----LQKYIKRDSK---NPGGNWTHTLS-LW 461
V++L ++FF + Y L + K I DSK GG T +
Sbjct: 490 FVLSLSNPSFEGSFFFEE--GMIIKYMLLEPNQIFKTIVNDSKCVILAGGTMQPTSEFIE 547
Query: 462 CLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFG---------TCLEAPHVIDV 512
L P V KD+ + S + I+ L ++F G F C ++++
Sbjct: 548 NLLPFVPSKDIVQFSCNHIIPESNL---DTFIVSEGFNFNYESRNNESVMCKLYDFLLEL 604
Query: 513 DLQVLTSVISTGPDNYPLNASYKTADGYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGG 572
+V ++ P Y +E + W+ + +L+ K +F E GG
Sbjct: 605 GCRVPHGIVVFFP-------------SYGYLEHVIKFWQLEEIFEKLSMNKRIFYETPGG 651
Query: 573 SQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRG 632
S +L Y ++I K A + G I Q+N + R
Sbjct: 652 SD-----ILPQYSSTILDKKKGAFL----FSVVGGKLSEGINFQDN----------LARA 692
Query: 633 KIVVGIPFPNINDIQVSLKKKYNDTYRSS-----KNLLSGN-EWYCNQAFRALNQAIGRC 686
++VG+P+PN+ ++ +KK++ + S K+ S E+Y N +A+NQ+IGR
Sbjct: 693 VVMVGLPYPNLYSSELLVKKRHIEQKVISAGGSLKDAKSATIEFYENICMKAVNQSIGRA 752
Query: 687 IRHRFDYGAIILLDERFQEERNRAHISKWLRKSIK 721
IRH DY I L+D R+ + + +S+W+RK +K
Sbjct: 753 IRHANDYACIYLVDNRYLNNKVQHKLSEWVRKRVK 787
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 22 GIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQN 81
G PYQPY Q M + L+ ++ G + ESPTGTGK+LSL+CST+ W +
Sbjct: 2 GKNFHHPYQPYDIQTQLMEHIYELLNSGKKVG----IFESPTGTGKTLSLICSTVTWLRE 57
Query: 82 CKLK 85
KL+
Sbjct: 58 HKLE 61
>sp|A6QLJ0|ERCC2_BOVIN TFIIH basal transcription factor complex helicase XPD subunit
OS=Bos taurus GN=ERCC2 PE=2 SV=1
Length = 760
Score = 129 bits (323), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 190/803 (23%), Positives = 312/803 (38%), Gaps = 165/803 (20%)
Query: 20 VGGIQVEFPYQ-PYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
V G+ V FPY Y Q +M + TLD H +LE P+GTGK++SLL +A+
Sbjct: 5 VDGLLVYFPYDYIYPEQFSYMLELKRTLD-----AKGHGVLEMPSGTGKTVSLLALIMAY 59
Query: 79 QQNCKLK-NQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKN 137
Q+ L+ +L S + P+ E V + L F + + +P +++ N
Sbjct: 60 QRAYPLEVTKLIYCSRTVPEIEKVIEELRKLLSFYEKQEGEKLPFLGLALSSR---KNLC 116
Query: 138 VKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEEC 197
+ ++TP F + + H T YVR +
Sbjct: 117 IHPEVTPLRFGKD------------------------VDGKCHSLTASYVRAQYQ----- 147
Query: 198 KLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMAD 257
D +L +F V G G +++++DL VG+ C Y+ AR
Sbjct: 148 ----RDSSLPHCRFYEEFDVHGRQVPLPTG---IYNLDDLKAVGRRQGWCPYFLARYSIL 200
Query: 258 DAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQ 316
A +V Y Y+++P I + ++ + A+++ DEAHNI+++ D+ SV++ L + Q
Sbjct: 201 HANVVVYSYHYLLDPKIADLVSKELARKAVVVFDEAHNIDNVCIDSMSVNLTRRTLDRCQ 260
Query: 317 MELE----QVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALREL 372
LE V + Q L E + LV + R+A+ A+ H + D+ L+E
Sbjct: 261 ANLETLQKTVLRIKETDEQRLREEYRRLVEGL--REASAARETDAHLANPVLPDEVLKEA 318
Query: 373 QEANI-SRQCFPILLECATKAIK-----EATDTESELPHLSGMS---------------- 410
+I + + F L + +K + ES LSG++
Sbjct: 319 VPGSIRTAEHFLGFLRRLLEYVKWRLRVQHVVQESPPAFLSGLAQRVCIQRKPLRFCAER 378
Query: 411 ----VITLE----GLFSSLTYFFSRNGSHVSDYQLALQKYIK-RDSKNPGGNWTHTLSLW 461
+ TLE FS LT + + VS Y I+ D + P L
Sbjct: 379 LRSLLYTLEISDLTDFSPLT-LLANFATLVSTYAKGFTIIIEPFDDRTPTIA-NPILHFS 436
Query: 462 CLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELG---VQFGT--------CLEAPHVI 510
C++ ++ K V E S+I+TSGTLSP++ + L V T CL P +I
Sbjct: 437 CMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMATFTMTLARVCL-CPMII 495
Query: 511 DV--DLQVLTSVISTGPD--------NYPLNASYKTADG-------YKLMEKLCNRWRET 553
D ++S T D N L S DG Y+ ME W E
Sbjct: 496 GRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFTSYQYMESTVASWYEQ 555
Query: 554 GQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTI 613
G + K LF+E + G++ + L+ Y + G
Sbjct: 556 GILENIQRNKLLFIETQDGAETS--VALEKYQEACENG---------------------- 591
Query: 614 ESQENANKKGASFLAVCRGKIVVGIPF-------------PNINDIQVSLKKKYNDTYRS 660
+GA L+V RGK+ GI F P + LK + Y
Sbjct: 592 --------RGAILLSVARGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLE--YLR 641
Query: 661 SKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSI 720
+ + N++ A R Q +GR IR + DYG ++ D+RF R + +W+++ +
Sbjct: 642 DQFQIRENDFLTFDAMRHAAQCVGRAIRGKTDYGLMVFADKRFARADKRGKLPRWIQEHL 701
Query: 721 KQYD---SFDASLEGLKSFFRDV 740
+ + D ++ K F R +
Sbjct: 702 TDANLNLTVDEGVQVAKYFLRQM 724
>sp|O08811|ERCC2_MOUSE TFIIH basal transcription factor complex helicase XPD subunit
OS=Mus musculus GN=Ercc2 PE=2 SV=2
Length = 760
Score = 126 bits (317), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 187/803 (23%), Positives = 313/803 (38%), Gaps = 165/803 (20%)
Query: 20 VGGIQVEFPYQ-PYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
V G+ V FPY Y Q +M + TLD H +LE P+GTGK++SLL +A+
Sbjct: 5 VDGLLVYFPYDYIYPEQFSYMLELKRTLD-----AKGHGVLEMPSGTGKTVSLLALIVAY 59
Query: 79 QQNCKLK-NQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKN 137
Q+ L+ +L S + P+ E V + L F + + +P +++ N
Sbjct: 60 QRAYPLEVTKLIYCSRTVPEIEKVIEELRKLLSFYEQQEGEKLPFLGLALSSR---KNLC 116
Query: 138 VKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEEC 197
+ ++TP F + + H T YVR +
Sbjct: 117 IHPEVTPLRFGKD------------------------VDGKCHSLTASYVRAQYQ----- 147
Query: 198 KLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMAD 257
D +L +F + G G +++++DL +GQ C Y+ AR
Sbjct: 148 ----QDASLPHCRFYEEFDIHGRQMPLPAG---IYNLDDLKALGQRQGWCPYFLARYSIL 200
Query: 258 DAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQ 316
A +V Y Y+++P I + ++ + A+++ DEAHNI+++ D+ SV++ L + Q
Sbjct: 201 HANVVVYSYHYLLDPKIADLVSKELARKAVVVFDEAHNIDNVCIDSMSVNLTRRTLDRCQ 260
Query: 317 MELE----QVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALREL 372
L+ V + Q L + + LV + R+A++A+ H + D+ L+E
Sbjct: 261 SNLDTLQKTVLRIKETDEQRLRDEYRRLVEGL--REASVARETDAHLANPVLPDEVLQEA 318
Query: 373 QEANI-SRQCFPILLECATKAIK-----EATDTESELPHLSGMS---------------- 410
+I + + F L + +K + ES LSG++
Sbjct: 319 VPGSIRTAEHFLGFLRRLLEYVKWRLRVQHVVQESPPAFLSGLAQRVCIQRKPLRFCAER 378
Query: 411 ----VITLE----GLFSSLTYFFSRNGSHVSDYQLALQKYIK-RDSKNPGGNWTHTLSLW 461
+ TLE FS LT + + VS Y I+ D + P L
Sbjct: 379 LRSLLHTLEIADLADFSPLT-LLANFATLVSTYAKGFTIIIEPFDDRTPTIA-NPVLHFS 436
Query: 462 CLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELG---VQFGT--------CLEAPHVI 510
C++ ++ K V E S+I+TSGTLSP++ + L V T CL P +I
Sbjct: 437 CMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMATFTMTLARVCL-CPMII 495
Query: 511 DV--DLQVLTSVISTGPD--------NYPLNASYKTADG-------YKLMEKLCNRWRET 553
D ++S T D N L S DG Y+ ME W E
Sbjct: 496 GRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFTSYQYMESTVASWYEQ 555
Query: 554 GQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTI 613
G + K LF+E + G++ + L+ Y + G
Sbjct: 556 GILENIQRNKLLFIETQDGAETS--VALEKYQEACENG---------------------- 591
Query: 614 ESQENANKKGASFLAVCRGKIVVGIPF-------------PNINDIQVSLKKKYNDTYRS 660
+GA L+V RGK+ GI F P + LK + Y
Sbjct: 592 --------RGAILLSVARGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLE--YLR 641
Query: 661 SKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSI 720
+ + N++ A R Q +GR IR + DYG ++ D+RF R + +W+++ +
Sbjct: 642 DQFQIRENDFLTFDAMRHAAQCVGRAIRGKTDYGLMVFADKRFARADKRGKLPRWIQEHL 701
Query: 721 KQYD---SFDASLEGLKSFFRDV 740
+ + D ++ K F R +
Sbjct: 702 TDSNLNLTVDEGVQVAKYFLRQM 724
>sp|Q60452|ERCC2_CRIGR TFIIH basal transcription factor complex helicase XPD subunit
OS=Cricetulus griseus GN=ERCC2 PE=1 SV=1
Length = 760
Score = 124 bits (311), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 187/803 (23%), Positives = 311/803 (38%), Gaps = 165/803 (20%)
Query: 20 VGGIQVEFPYQ-PYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
V G+ V FPY Y Q +M + TLD H +LE P+GTGK++SLL +A+
Sbjct: 5 VDGLLVYFPYDYIYPEQFSYMLELKRTLD-----AKGHGVLEMPSGTGKTVSLLALIVAY 59
Query: 79 QQNCKLK-NQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKN 137
Q+ L+ +L S + P+ E V + L F + + +P +++ N
Sbjct: 60 QRAFPLEVTKLIYCSRTVPEIEKVIEELRKLLSFYEQQEGEKLPFLGLALSSR---KNLC 116
Query: 138 VKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEEC 197
+ ++TP F + + H T YVR +
Sbjct: 117 IHPEVTPLRFGKD------------------------VDGKCHSLTASYVRAQYQ----- 147
Query: 198 KLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMAD 257
D +L +F G G +++++DL +GQ C Y+ AR
Sbjct: 148 ----QDASLPHCRFYEEFDAHGRQVPLPAG---IYNLDDLKALGQRQGWCPYFLARYSIL 200
Query: 258 DAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQ 316
A +V Y Y+++P I + ++ + A+++ DEAHNI+++ D+ SV++ L + Q
Sbjct: 201 HANVVVYSYHYLLDPKIADLVSKELARKAVVVFDEAHNIDNVCIDSMSVNLTRRTLDRCQ 260
Query: 317 MELE----QVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALREL 372
L+ V + Q L + + LV + R+A+ A+ H + D+ L+E
Sbjct: 261 SNLDTLQKTVLRIKETDEQRLRDEYRRLVEGL--REASAARETDAHLANPVLPDEVLQEA 318
Query: 373 QEANI-SRQCFPILLECATKAIK-----EATDTESELPHLSGMS---------------- 410
+I + + F L + +K + ES LSG++
Sbjct: 319 VPGSIRTAEHFLGFLRRLLEYVKWRLRVQHVVQESPPAFLSGLAQRVCIQRKPLRFCAER 378
Query: 411 ----VITLE----GLFSSLTYFFSRNGSHVSDYQLALQKYIK-RDSKNPGGNWTHTLSLW 461
+ TLE FS LT + + VS Y I+ D + P L
Sbjct: 379 LRSLLHTLEIADLADFSPLT-LLANFATLVSTYAKGFTIIIEPFDDRTPTIA-NPILHFS 436
Query: 462 CLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELG---VQFGT--------CLEAPHVI 510
C++ ++ K V E S+I+TSGTLSP++ + L V T CL P +I
Sbjct: 437 CMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMATFTMTLARVCL-CPMII 495
Query: 511 DV--DLQVLTSVISTGPD--------NYPLNASYKTADG-------YKLMEKLCNRWRET 553
D ++S T D N L S DG Y+ ME W E
Sbjct: 496 GRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFTSYQYMESTVASWYEQ 555
Query: 554 GQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTI 613
G + K LF+E + G++ + L+ Y + G
Sbjct: 556 GILENIQRNKLLFIETQDGAETS--VALEKYQEACENG---------------------- 591
Query: 614 ESQENANKKGASFLAVCRGKIVVGIPF-------------PNINDIQVSLKKKYNDTYRS 660
+GA L+V RGK+ GI F P + LK + Y
Sbjct: 592 --------RGAILLSVARGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLE--YLR 641
Query: 661 SKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSI 720
+ + N++ A R Q +GR IR + DYG ++ D+RF R + +W+++ +
Sbjct: 642 DQFQIRENDFLTFDAMRHAAQCVGRAIRGKTDYGLMVFADKRFARADKRGKLPRWIQEHL 701
Query: 721 KQYD---SFDASLEGLKSFFRDV 740
+ + D ++ K F R +
Sbjct: 702 TDSNLNLTVDEGVQVAKYFLRQM 724
>sp|P18074|ERCC2_HUMAN TFIIH basal transcription factor complex helicase XPD subunit
OS=Homo sapiens GN=ERCC2 PE=1 SV=1
Length = 760
Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 187/803 (23%), Positives = 311/803 (38%), Gaps = 165/803 (20%)
Query: 20 VGGIQVEFPYQ-PYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW 78
V G+ V FPY Y Q +M + TLD H +LE P+GTGK++SLL +A+
Sbjct: 5 VDGLLVYFPYDYIYPEQFSYMRELKRTLD-----AKGHGVLEMPSGTGKTVSLLALIMAY 59
Query: 79 QQNCKLK-NQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNKN 137
Q+ L+ +L S + P+ E V + L F + + +P +++ N
Sbjct: 60 QRAYPLEVTKLIYCSRTVPEIEKVIEELRKLLNFYEKQEGEKLPFLGLALSSR---KNLC 116
Query: 138 VKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEEC 197
+ ++TP F + + H T YVR +
Sbjct: 117 IHPEVTPLRFGKD------------------------VDGKCHSLTASYVRAQYQ----- 147
Query: 198 KLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMAD 257
D +L +F G G +++++DL +G+ C Y+ AR
Sbjct: 148 ----HDTSLPHCRFYEEFDAHGREVPLPAG---IYNLDDLKALGRRQGWCPYFLARYSIL 200
Query: 258 DAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVDIDEDVLLKLQ 316
A +V Y Y+++P I + ++ + A+++ DEAHNI+++ D+ SV++ L + Q
Sbjct: 201 HANVVVYSYHYLLDPKIADLVSKELARKAVVVFDEAHNIDNVCIDSMSVNLTRRTLDRCQ 260
Query: 317 MELE----QVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFFSCWTGDKALREL 372
LE V + Q L + + LV + R+A+ A+ H + D+ L+E
Sbjct: 261 GNLETLQKTVLRIKETDEQRLRDEYRRLVEGL--REASAARETDAHLANPVLPDEVLQEA 318
Query: 373 QEANI-SRQCFPILLECATKAIK-----EATDTESELPHLSGMS---------------- 410
+I + + F L + +K + ES LSG++
Sbjct: 319 VPGSIRTAEHFLGFLRRLLEYVKWRLRVQHVVQESPPAFLSGLAQRVCIQRKPLRFCAER 378
Query: 411 ----VITLE----GLFSSLTYFFSRNGSHVSDYQLALQKYIK-RDSKNPGGNWTHTLSLW 461
+ TLE FS LT + + VS Y I+ D + P L
Sbjct: 379 LRSLLHTLEITDLADFSPLT-LLANFATLVSTYAKGFTIIIEPFDDRTPTIA-NPILHFS 436
Query: 462 CLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELG---VQFGT--------CLEAPHVI 510
C++ ++ K V E S+I+TSGTLSP++ + L V T CL P +I
Sbjct: 437 CMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMATFTMTLARVCL-CPMII 495
Query: 511 DV--DLQVLTSVISTGPD--------NYPLNASYKTADG-------YKLMEKLCNRWRET 553
D ++S T D N L S DG Y+ ME W E
Sbjct: 496 GRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFTSYQYMESTVASWYEQ 555
Query: 554 GQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTI 613
G + K LF+E + G++ + L+ Y + G
Sbjct: 556 GILENIQRNKLLFIETQDGAETS--VALEKYQEACENG---------------------- 591
Query: 614 ESQENANKKGASFLAVCRGKIVVGIPF-------------PNINDIQVSLKKKYNDTYRS 660
+GA L+V RGK+ GI F P + LK + Y
Sbjct: 592 --------RGAILLSVARGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLE--YLR 641
Query: 661 SKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSI 720
+ + N++ A R Q +GR IR + DYG ++ D+RF R + +W+++ +
Sbjct: 642 DQFQIRENDFLTFDAMRHAAQCVGRAIRGKTDYGLMVFADKRFARGDKRGKLPRWIQEHL 701
Query: 721 KQYD---SFDASLEGLKSFFRDV 740
+ + D ++ K F R +
Sbjct: 702 TDANLNLTVDEGVQVAKYFLRQM 724
>sp|A7ERG1|CHL1_SCLS1 ATP-dependent RNA helicase CHL1 OS=Sclerotinia sclerotiorum (strain
ATCC 18683 / 1980 / Ss-1) GN=CHL1 PE=3 SV=1
Length = 902
Score = 121 bits (304), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 162/665 (24%), Positives = 265/665 (39%), Gaps = 150/665 (22%)
Query: 175 LASRKHYCTNKYVRDKEN----IDEECKLLLGD---RNLGCPQFKNVHKVRGHPSLQKGG 227
L SRK+ C N V +K N I+E C L + CP N + +
Sbjct: 237 LGSRKNLCINPKV-NKLNSVTAINERCAELQQSSTPKEHKCPHLPNKDNKPLVSTFRDHA 295
Query: 228 CHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAIL 287
+ DIED+ +G+ + C YYA+RS A++V PY ++ R A+ + +KG ++
Sbjct: 296 LATIRDIEDMGALGKEISICPYYASRSAIKPAEIVTLPYPLLLQKSAREALGISLKGHVV 355
Query: 288 ILDEAHNIED-IARDAGS------VDIDEDVLLKLQMELEQVCSVNPMIY-QPLIEMTQD 339
I+DEAHN+ D IA G+ + + +++L M+ + IY I +
Sbjct: 356 IIDEAHNLMDAIAGIYGTEMSLKELKLAKEMLGNYFMKFAKRLKGKNRIYVAQAIRVVDS 415
Query: 340 LVGWIERR------KATLAKREFQHFFSCWTGD--KALRELQEANISRQCFPILLECATK 391
L+G++ +R + ++E D K +R LQE+ ++R+ T+
Sbjct: 416 LMGYLMKRLEGTEIDGVVDQKELLAGKGADQIDLFKLIRYLQESKLARKVESYTEH--TR 473
Query: 392 AIKEATDTESELPHLSGMSVITLEGLFSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPG 451
IK+A S +PH + + + + +LT ++ QL K
Sbjct: 474 NIKQA----STIPHNNKETPKSTTPILHTLTSLLLALTHPTTEGQLFFLKSTSTSPSPSP 529
Query: 452 GNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFG----TCLEAP 507
TL LNPA F+ + + +IIL GT+SP + ++S L T L
Sbjct: 530 D--LITLKFQLLNPAPHFESIVSSARAIILAGGTMSPFSDYTSILFPSIPSHKITTLSCG 587
Query: 508 HVIDVDLQVLTSVISTGPDNYP---------------------LNASYKTADG------- 539
HVI + S +S GP P LN DG
Sbjct: 588 HVIP-KTHLFASTVSRGPTGIPFKWTFANRGNTDMMDELGRVLLNVCTIVPDGVVVFFPS 646
Query: 540 YKLMEKLCNRW----------------RETGQ----WSRLNAKKPLFVEPKGGSQEDFEI 579
Y + + R+ E G+ RL+ KKP+F E K +E E
Sbjct: 647 YNFLSTILYRFSIPSSGTGSATATATGTEKGKGKTILERLSEKKPIFQESK---EESVET 703
Query: 580 VLKHYYNSISQGSKC---AVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVV 636
+L Y SI++G +VV K EG N + A+ R ++V
Sbjct: 704 ILAAYAKSIAEGKGALLFSVVGGKL--SEGINFSD----------------ALGRCVMIV 745
Query: 637 GIPFPNIND---------IQVSLKKKYNDTYRSSKN------------------------ 663
G+PFPN++ I+ S ++ Y+ ++
Sbjct: 746 GLPFPNMHTAEWKRRLRFIEESAVERLTSFYQEKESNNKDGNGNEEEGNGKKKENREKIQ 805
Query: 664 ---LL-----SGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKW 715
+L +++ N RA+NQ +GR IRHR D+ I+LLDER++ ER ++ W
Sbjct: 806 RDQILQQAKGEARDYFENVCMRAVNQCVGRAIRHRGDWAGILLLDERYKGERVVGKLAGW 865
Query: 716 LRKSI 720
+R+ +
Sbjct: 866 IREGV 870
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 35/58 (60%), Gaps = 5/58 (8%)
Query: 28 PYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAWQQNCKLK 85
PY PY Q FM V L++ + +LESPTGTGKSLSL+C +L W ++ K K
Sbjct: 22 PYTPYPIQEKFMQTVYDVLEQGK-----IGILESPTGTGKSLSLICGSLTWLRDFKRK 74
>sp|Q55G81|ERCC2_DICDI TFIIH basal transcription factor complex helicase repD subunit
OS=Dictyostelium discoideum GN=repD PE=2 SV=1
Length = 776
Score = 117 bits (293), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 184/853 (21%), Positives = 335/853 (39%), Gaps = 198/853 (23%)
Query: 18 YHVGGIQVEFPYQ-PYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+++ + V FPY Y Q +M + +LD G C +LE P+GTGK++SLL
Sbjct: 3 FYIEDLLVYFPYSYIYPEQYSYMVALKRSLDNG---GPC--ILEMPSGTGKTVSLLSLIS 57
Query: 77 AWQ-QNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNN 135
++Q +N +K L S + P+ E T + A+ +
Sbjct: 58 SYQVKNPSIK--LIYCSRTVPEIEQAT------------------------EEARRVLQY 91
Query: 136 KNVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYV---RDKEN 192
+N SE + + + ++SR++ C V RD +
Sbjct: 92 RN-----------------------SEMGEESPKTLCMSMSSRRNLCIQPRVSEERDGKV 128
Query: 193 IDEECKLLLGDRNLGCP-----QFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGC 247
+D C+ L N P +F + G L +G V+ +EDL G + C
Sbjct: 129 VDALCRELTSSWNRESPTSEKCKFFENFESNGKEILLEG----VYSLEDLKEYGLKHQMC 184
Query: 248 SYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDI-KGAILILDEAHNIEDIARDAGSVD 306
Y+ +R M + A +V Y Y+++P I + +I++ DEAHNI+++ +A S++
Sbjct: 185 PYFLSRHMLNFANIVIFSYQYLLDPKIASLISSSFPSNSIVVFDEAHNIDNVCINALSIN 244
Query: 307 IDEDVL-------LKLQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHF 359
ID +L K+ ++E + V+ + L + Q LV + R +T A
Sbjct: 245 IDNKLLDTSSKNIAKINKQIEDIKKVDE---KRLKDEYQRLVNGLARSGSTRADET---- 297
Query: 360 FSCWTGDKALRE--LQEA---NISR-QCFPILLECATKAIK-----EATDTESELPHLSG 408
T D L +QEA NI + + F LL +K + +ES L L G
Sbjct: 298 ----TSDPVLPNDVIQEAVPGNIRKAEHFISLLRRVVDYLKSRLKSQMLLSESPLAFLQG 353
Query: 409 MSVIT-------------LEGLFSSLTY--------------FFSRNGSHVSDYQLALQK 441
+ T L L +L F + G++ + + + ++
Sbjct: 354 LYHATQISSRTLRFCSSRLSSLLRTLRINDVNQFSGISLIADFATLVGTYNNGFLIIIEP 413
Query: 442 YIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFG 501
Y +R + + CL+ ++ K + + S+++TSGTLSP++ ++ L +
Sbjct: 414 YYQRQN----NTYDQIFQFCCLDASIGMKPIFDKYRSVVITSGTLSPLDIYTKMLNFR-- 467
Query: 502 TCLEAPHVIDVDLQVLTS------VISTGPDNYPLNASYK-------------------- 535
P V++ L +++ G D ++ +
Sbjct: 468 -----PTVVERLTMSLNRNCICPCILTRGSDQISISTKFDVRSDTAVVRNYGALLVEVSA 522
Query: 536 -TADG-------YKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNS 587
DG Y ME++ + W E G + + K +FVE ++ + L++Y +
Sbjct: 523 IVPDGIICFFTSYSYMEQIVSVWNEMGLLNNILTNKLIFVETSDPAES--ALALQNYKKA 580
Query: 588 ISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQ 647
G ++ R K D + N+ G R I+ GIP+ N
Sbjct: 581 CDSGRGAVLLSVARGKVSEGIDFD--------NQYG-------RCVILYGIPYINTESKV 625
Query: 648 VSLKKKY-NDTYRSSKNLLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEE 706
+ + ++ D Y+ + NE+ A R +Q +GR IR + DYG +I D+R+
Sbjct: 626 LRARLEFLRDRYQ-----IRENEFLTFDAMRTASQCVGRVIRGKSDYGIMIFADKRYNRL 680
Query: 707 RNRAHISKWLRKSIKQYD---SFDASLEGLKSFFRDVKGWVGKKMFNGLENSDNDVDHVS 763
R + +W+ + + S D ++ K+F R++ ++ L S ++HV
Sbjct: 681 DKRNKLPQWILQFCQPQHLNLSTDMAISLSKTFLREMGQPFSRE--EQLGKSLWSLEHVE 738
Query: 764 SMDQCKEVTKQNT 776
K +QN+
Sbjct: 739 KQSTSKPPQQQNS 751
>sp|P06839|RAD3_YEAST DNA repair helicase RAD3 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=RAD3 PE=1 SV=1
Length = 778
Score = 116 bits (291), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 174/798 (21%), Positives = 317/798 (39%), Gaps = 155/798 (19%)
Query: 18 YHVGGIQVEFPY-QPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
+++ + V FPY + Y Q +MC + TLD +++LE P+GTGK++SLL T+
Sbjct: 3 FYIDDLPVLFPYPKIYPEQYNYMCDIKKTLDVGG-----NSILEMPSGTGKTVSLLSLTI 57
Query: 77 AWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTIPPSTNGQTAQVAMNNK 136
A+Q + ++ S + + E L N + +T ++
Sbjct: 58 AYQMHYPEHRKIIYCSRTMSEIEKALVELENLMDY---------------RTKELGYQED 102
Query: 137 NVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKHYCTNKYVRDKENIDEE 196
+T SR + + +S+ +K V+ + TN + K D E
Sbjct: 103 FRGLGLT------SRKNLCLHPEVSKERKG------TVVDEKCRRMTNGQAKRKLEEDPE 150
Query: 197 CKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMA 256
+ L C +N++ + L KG V E L+ + C Y+ R M
Sbjct: 151 ANVEL------CEYHENLYNIEVEDYLPKG----VFSFEKLLKYCEEKTLCPYFIVRRMI 200
Query: 257 DDAQLVFCPYSYIINPVI--RGAMEVDIKGAILILDEAHNIEDIARDAGSVDIDEDVLL- 313
++ Y Y+++P I R + EV K +I+I DEAHNI+++ ++ S+D+ D L
Sbjct: 201 SLCNIIIYSYHYLLDPKIAERVSNEVS-KDSIVIFDEAHNIDNVCIESLSLDLTTDALRR 259
Query: 314 ---------------------KLQMELEQVC-----------SVNPMIYQPLIE---MTQ 338
KLQ E E++ P + P++ +T+
Sbjct: 260 ATRGANALDERISEVRKVDSQKLQDEYEKLVQGLHSADILTDQEEPFVETPVLPQDLLTE 319
Query: 339 DLVGWIERRK--ATLAKREFQHFFSCWTGDKALRELQEANIS-RQCFPILLECATKAIKE 395
+ G I R + + KR ++ T K L + E S Q L K ++
Sbjct: 320 AIPGNIRRAEHFVSFLKRLIEYL---KTRMKVLHVISETPKSFLQHLKQLTFIERKPLRF 376
Query: 396 ATDTESELPHLSGMSVITLEGL--FSSLTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGN 453
++ S L + + V +E + F + ++ + L ++ Y ++ P
Sbjct: 377 CSERLSLL--VRTLEVTEVEDFTALKDIATFATLISTYEEGFLLIIEPYEIENAAVPNPI 434
Query: 454 WTHTLSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVD 513
T CL+ ++ K V E S+I+TSGT+SP++ + L F T L+ + + +
Sbjct: 435 MRFT----CLDASIAIKPVFERFSSVIITSGTISPLDMYPRMLN--FKTVLQKSYAMTLA 488
Query: 514 LQ-VLTSVISTGPDNYPLNASYK---------------------TADG-------YKLME 544
+ L +I+ G D +++ ++ T DG Y ME
Sbjct: 489 KKSFLPMIITKGSDQVAISSRFEIRNDPSIVRNYGSMLVEFAKITPDGMVVFFPSYLYME 548
Query: 545 KLCNRWRETGQWSRLNAKKPLFVEPKGGSQEDFEIVLKHYYNSISQGSKCAVVRKKRVKR 604
+ + W+ G + K + VE + + L+ Y + S G ++ R K
Sbjct: 549 SIVSMWQTMGILDEVWKHKLILVETPDAQETS--LALETYRKACSNGRGAILLSVARGKV 606
Query: 605 EGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKY-NDTYRSSKN 663
D + ++ G R +++GIPF + + ++ + YR
Sbjct: 607 SEGIDFD--------HQYG-------RTVLMIGIPFQYTESRILKARLEFMRENYR---- 647
Query: 664 LLSGNEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQY 723
+ N++ A R Q +GR +R + DYG ++L D RF R R+ + KW+ + +
Sbjct: 648 -IRENDFLSFDAMRHAAQCLGRVLRGKDDYGVMVLADRRFS--RKRSQLPKWIAQGLSDA 704
Query: 724 D---SFDASLEGLKSFFR 738
D S D ++ K F R
Sbjct: 705 DLNLSTDMAISNTKQFLR 722
>sp|Q6CAX3|CHL1_YARLI ATP-dependent RNA helicase CHL1 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=CHL1 PE=3 SV=1
Length = 803
Score = 114 bits (286), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 144/332 (43%), Gaps = 68/332 (20%)
Query: 28 PYQPYGSQLVFMCRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTLAW--------- 78
PY PY Q+ FM + ++ + + ESPTGTGK+LSL+C ++ W
Sbjct: 12 PYTPYPIQVDFMEALYDCIE-----SYKVGIFESPTGTGKTLSLICGSMTWLRKNKAQLA 66
Query: 79 ---------------QQNCKL---------------------KNQLANISHSKPDTEAVT 102
+Q +L KN A IS+ + A
Sbjct: 67 VSTASADENEPAWVLEQTIQLAREEFSRNREMLQKRLDKMRRKNMRARISYEQGFKRAKK 126
Query: 103 DP-LANGGGFIPESQPSTIPPSTNGQTAQVAMNNKNVKKKMTPTIFYASRTHSQISQVIS 161
P + F+PE I P + +A +N ++ IF ASRTHSQ+SQ +
Sbjct: 127 APEPVDDSQFLPEDYSEVIKPEVQRLLSALAPPVENDFQEPVKIIF-ASRTHSQLSQFVG 185
Query: 162 EYKKTAY----------RVPMAVLASRKHYCTNKYVRDKENI---DEECKLLLGDRNLGC 208
+ + T + + L SRK C N V ++ ++ C+ L + GC
Sbjct: 186 QMQHTTFPPSSDLQDLESTKLISLGSRKQLCINPRVSHMNSVQAMNDACRDLREGKKGGC 245
Query: 209 PQFKNVHKVRGHP---SLQKGGCHEVHDIEDLVNVGQVVRGCSYYAARSMADDAQLVFCP 265
+KN H G + + E+ DIEDL +G+ C YYA+R+ ++++ P
Sbjct: 246 KYYKNPHDALGKVDINTFRDTTLAEILDIEDLYKLGKHTSTCPYYASRASIPASEVITVP 305
Query: 266 YSYIINPVIRGAMEVDIKGAILILDEAHNIED 297
Y +++ R A+++ +K +I+I+DEAHN+ D
Sbjct: 306 YQILLSRSARKAIDLPVKNSIVIIDEAHNLLD 337
Score = 94.0 bits (232), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 139/335 (41%), Gaps = 82/335 (24%)
Query: 458 LSLWCLNPAVVFKDVAELSLSIILTSGTLSPMNSFSSEL-------GVQFGTCLEAPHVI 510
L L+P+ FKD+ E + ++L GT+ P + L ++ +C HVI
Sbjct: 490 LKYQLLDPSEPFKDIVENARCVVLAGGTMEPTGDYLEYLLPYLSQDQIKLFSC---GHVI 546
Query: 511 DVDLQVLTSVISTGPDNYPLNASYKTAD----------------------------GYKL 542
+ VI GP NY N ++ + YK
Sbjct: 547 PPQ-NLSVQVIPNGP-NYSFNFTFDKRNDEKMILDVAITLLVYSKIIPEGMVVFFPSYKY 604
Query: 543 MEKLCNRWRETGQ-----WSRLNAKKPLFVEPKGGSQED-FEIVLKHYYNSISQGSKCAV 596
+E++ W++ + + LN +K +FVE SQ D E L Y + +G+
Sbjct: 605 LEQVVAVWKKAKKDGKNIYEILNDQKRIFVE----SQHDSVEKTLSEYAEEVPKGAILLS 660
Query: 597 VRKKRVKREGNNDLNTIESQENANKKGASFLAVCRGKIVVGIPFPNINDIQVSLKKKYND 656
V ++ EG N + + R ++G+PFPN+ ++ K+KY +
Sbjct: 661 VVGGKMS-EGINFSD----------------GLARAVFMIGLPFPNLMSAEIIAKRKYIE 703
Query: 657 TYRSSKNLLSG--------------NEWYCNQAFRALNQAIGRCIRHRFDYGAIILLDER 702
S K G ++Y N RA+NQ++GR IRH DY I LLD R
Sbjct: 704 QSVSEKMKAKGVSAKEALEASKGAARDFYMNICLRAVNQSVGRAIRHANDYACIFLLDGR 763
Query: 703 FQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFF 737
F + + +SKW+R+ I++ SF +L ++ FF
Sbjct: 764 FGKPEIQKKLSKWMREGIRE-GSFKEALGEVQQFF 797
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.130 0.381
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 470,982,062
Number of Sequences: 539616
Number of extensions: 19980523
Number of successful extensions: 61645
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 82
Number of HSP's successfully gapped in prelim test: 264
Number of HSP's that attempted gapping in prelim test: 59113
Number of HSP's gapped (non-prelim): 2193
length of query: 1269
length of database: 191,569,459
effective HSP length: 129
effective length of query: 1140
effective length of database: 121,958,995
effective search space: 139033254300
effective search space used: 139033254300
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 67 (30.4 bits)