Query 000820
Match_columns 1268
No_of_seqs 655 out of 3968
Neff 8.8
Searched_HMMs 29240
Date Tue Mar 26 16:22:48 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/000820.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_591-595//hhsearch_pdb/000820hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3cob_A Kinesin heavy chain-lik 1.0 1 1 720.6 25.2 368 887-1254 1-368 (369)
2 3au4_A Myosin-X; protein-prote 1.0 1 1 687.4 50.2 456 113-606 46-551 (555)
3 3pvl_A Myosin VIIA isoform 1; 1.0 1 1 680.8 50.0 474 72-598 31-574 (655)
4 4etp_A Kinesin-like protein KA 1.0 1 1 673.4 35.0 366 852-1219 20-403 (403)
5 3u06_A Protein claret segregat 1.0 1 1 667.2 31.8 353 861-1219 29-388 (412)
6 3bfn_A Kinesin-like protein KI 1.0 1 1 659.6 23.5 351 883-1236 13-372 (388)
7 2owm_A Nckin3-434, related to 1.0 1 1 656.9 28.1 338 885-1224 32-425 (443)
8 2y65_A Kinesin, kinesin heavy 1.0 1 1 652.7 24.5 330 887-1224 7-344 (365)
9 2vvg_A Kinesin-2; motor protei 1.0 1 1 651.7 25.8 332 890-1225 3-347 (350)
10 1goj_A Kinesin, kinesin heavy 1.0 1 1 649.6 25.3 332 888-1223 3-340 (355)
No 1
>3cob_A Kinesin heavy chain-like protein; motor, switch II, loop L11, conformation, nucleotide, ATP-binding, microtubule, motor protein; HET: ADP; 2.20A {Solanum tuberosum} SCOP: c.37.1.9 PDB: 3cnz_A* 1sdm_A* 3h4s_A*
Probab=1.00 E-value=1 Score=720.56 Aligned_cols=368 Identities=86% Similarity=1.237 Sum_probs=349.5
Q ss_pred CCCCCCCEEEECCCCCCCCCCCCCCCEEEEECCCCEEECCCCCCCCEEEEECCCCCCCCCHHHHHHCHHHHHHHHHCCCC
Q ss_conf 11235530410015998323223781699707972232247899811367041038988845587307999999755641
Q 000820 887 EDMKGKIRVYCRLRPLNEKEDAEKERYVLTSLDEFTVEHPWKDDKVKQHMYDQVFDGYATQEDVFEDTRYLVQSAVDGYN 966 (1268)
Q Consensus 887 e~~k~~i~v~~rirp~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~vf~~~~~q~~v~~~~~~lv~~~~~G~n 966 (1268)
+|++++|+|++|+||+.+.|...+...++...+..++..+...+..+.|.||+||+++++|++||+.++|+|+++++|||
T Consensus 1 ee~~~~i~V~vRvRP~~~~E~~~~~~~~~~~~~~~~v~~~~~~~~~~~f~FD~Vf~~~~~Q~~Vy~~~~~lv~~~l~G~n 80 (369)
T 3cob_A 1 EDMKGKIRVYCRLRPLCEKEIIAKERNAIRSVDEFTVEHLWKDDKAKQHMYDRVFDGNATQDDVFEDTKYLVQSAVDGYN 80 (369)
T ss_dssp ---CCBCEEEEEECCCCHHHHHTTCCBCEEECSSSEEEEECTTSCEEEEECSEEECTTCCHHHHHHTTTHHHHHHHTTCE
T ss_pred CCCCCCEEEEEECCCCCHHHCCCCCCEEEECCCCEEEEECCCCCCCEEEECCEEECCCCCCCEEHHHHHHHHHHHHCCCC
T ss_conf 98899849999879998345467983799769967999337899826886598989999731402213132576646971
Q ss_pred EEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEC
Q ss_conf 67984213478754212458999997078999999998733896299999994343146202478987644652379858
Q 000820 967 VCIFAYGQTGSGKTFTIYGSECNPGITPRAISELFRILKKENNKFSFSLKAYMVELYQDTLVDLLLPRNEKRLKLEIKKD 1046 (1268)
Q Consensus 967 ~~i~ayG~tgsGKT~tl~G~~~~~Gii~r~~~~lf~~~~~~~~~~~~~v~~s~~eiy~e~v~DLL~~~~~~~~~~~i~~~ 1046 (1268)
+||||||||||||||||+|+..++|||||++++||..+......+.|.|++||+|||||+|+|||.|.......+.|+++
T Consensus 81 ~tifAYGqTGSGKTyTM~G~~~~~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~~l~i~e~ 160 (369)
T 3cob_A 81 VCIFAYGQTGSGKTFTIYGADSNPGLTPRAMSELFRIMKKDSNKFSFSLKAYMVELYQDTLVDLLLPKQAKRLKLDIKKD 160 (369)
T ss_dssp EEEEEEECTTSSHHHHHTBCSSSBCHHHHHHHHHHHHHHHTTTTEEEEEEEEEEEECSSCEEESSCCSSSCCCCCEEEEC
T ss_pred EEEEEECCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCEEEECCCCCCCCCCCEEEEEC
T ss_conf 59998789999883751179988862589999999998741357526778999877076323457875567764278997
Q ss_pred CCCCEEECCCEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCEEEEEEEEEECCCCCCC
Q ss_conf 99957735938999279879999998100254434567888889853389999998405877266789999966899654
Q 000820 1047 SKGMVLVENVTVVPISTFEEIKSIIQRGSDQRHTSGTQMNEESSRSHLILSIVIESTNLQTQSVARGKLSFVDLAGSERV 1126 (1268)
Q Consensus 1047 ~~~~~~~~~~~~~~v~s~~~~~~~l~~~~~~r~~~~t~~n~~ssrsH~i~~i~i~~~~~~~~~~~~s~l~~vDLagse~~ 1126 (1268)
+.++++|.|++++.|.++++++.++..|..+|++++|.+|..|||||+||+|++++.+........|+|+|||||||||.
T Consensus 161 ~~~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~~~skL~lVDLAGSEr~ 240 (369)
T 3cob_A 161 SKGMVSVENVTVVSISTYEELKTIIQRGSEQRHTTGTLMNEQSSRSHLIVSVIIESTNLQTQAIARGKLSFVDLAGSERV 240 (369)
T ss_dssp TTSCEEEETCCCEEECSHHHHHHHHHHHHHHTCCCSCCTTCHHHHSEEEEEEEEEEEETTTCCEEEEEEEEEECCCSSCC
T ss_pred CCCCEECCCCEEEEECCHHHHHHHHHHHHHCCEEECCCCCCCCCCCEEEEEEEEEEECCCCCCEEEEEEEEEECCCCCCC
T ss_conf 99988805987998089999999999875255230344778777633899999998527877278889999968878754
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHH
Q ss_conf 57799223599999974979999999999607999998878742222345678885313999828998888999999999
Q 000820 1127 KKSGSSGNQLKEAQSINKSLSALGDVISALSSGSQHIPYRNHKLTMLMSDSLGGNAKTLMFVNVSPAESNLEESYNSLTY 1206 (1268)
Q Consensus 1127 ~~~~~~~~~~~e~~~in~sl~~L~~vi~al~~~~~~ipyr~skLT~lL~~~lgg~~~~~~i~~isp~~~~~~etl~tL~~ 1206 (1268)
.++++.|.+++|+.+||+||++|++||.+|+.+..||||||||||+||+|+|||||+|+||+||||+..+++||++||+|
T Consensus 241 ~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~hvPyRdSkLT~lLqdsLgGnskt~mIa~isP~~~~~~ETl~TLrf 320 (369)
T 3cob_A 241 KKSGSAGNQLKEAQSINKSLSALGDVISALSSGNQHIPYRNHKLTMLMSDSLGGNAKTLMFVNISPAESNLDETHNSLTY 320 (369)
T ss_dssp CCCSSCSHHHHHHHHHTHHHHHHHHHHHHHHTTCSCCCGGGCHHHHHTTTTTTSSSEEEEEEEECCBGGGHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHH
T ss_conf 43476302347787877889999999999864899678747777887887628985279999947720028999999999
Q ss_pred HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
Q ss_conf 998511535777778969999999999999998089999468999999
Q 000820 1207 ASRVRSIVNDPNKNVSSKEVARLKRLVAYWKEQAGKKGDYEELEEIQE 1254 (1268)
Q Consensus 1207 a~r~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 1254 (1268)
|+|++.|+|.|.+|.++++|.+||++++.++++++..++.++++++++
T Consensus 321 A~rak~i~~~~~~n~~~~ei~~L~~~l~~~~~~~~~~~~~~~~~~~~~ 368 (369)
T 3cob_A 321 ASRVRSIVNDPSKNVSSKEVARLKKLVSYWKEQAGRKGDDEELEEIQD 368 (369)
T ss_dssp HHHHHTCBCCCCCCEECHHHHHHHHHTTCC-----------CCBCCCC
T ss_pred HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHC
T ss_conf 999865456774157889999999999999976479998678776214
No 2
>3au4_A Myosin-X; protein-protein complex, motor protein cargo transportation, protein-apoptosis complex; 1.90A {Homo sapiens} PDB: 3au5_A 3pzd_A
Probab=1.00 E-value=1 Score=687.43 Aligned_cols=456 Identities=22% Similarity=0.365 Sum_probs=402.7
Q ss_pred CCCCCEECCCCCCCCCCCCCC--------------HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 334220116777764568993--------------238999999999998419898999899992356889999999751
Q 000820 113 FEDMLCFQKDPIPTSLLKLNS--------------DLVSRATKLFQIILKYMGVESSDRVTPPSLDERIDFVGKLYKHTL 178 (1268)
Q Consensus 113 ~~~~l~~~k~pi~~~Ll~~~~--------------~~~~~A~~~f~~il~~mg~~~~~~~~~~~~~~~~~~~~~i~~~~~ 178 (1268)
.+++|+|+++||++|||++++ ++.+.|+++|+.||+|||+. ++..++++|++.|+
T Consensus 46 ~~~~~~~s~~pi~~pLl~l~~~~~~~~~~~~~~~~~l~~~A~~~F~~i~~~~~~~-----------~~~~~~~~i~~~~~ 114 (555)
T 3au4_A 46 RNPILRYTHHPLHSPLLPLPYGDINLNLLKDKGYTTLQDEAIKIFNSLQQLESMS-----------DPIPIIQGILQTGH 114 (555)
T ss_dssp HCGGGSCCSSCCSSCSSCCCCTTCCHHHHHHTTCCCHHHHHHHHHHHHHHC--CC-----------CCHHHHHHHHHHHH
T ss_pred CCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC-----------CHHHHHHHHHHHHC
T ss_conf 6703411689876556078876433322222331057999999999998453687-----------48999999999861
Q ss_pred CCCCCCHHHHHHHHHHCCCCCCHHHH--HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 34367216899997621899990248--8899999985324699901589999999721158765324358999999999
Q 000820 179 KRVELRDELFAQISKQTRNNPDRQCL--IKAWELMYLCASSMPPSKDMGGYLTEYVHNVAQGIIIDSEVQTLALNTLNAL 256 (1268)
Q Consensus 179 ~~~~LrDEiy~Ql~KQ~t~np~~~s~--~r~W~Ll~~~~~~f~PS~~l~~~l~~~l~~~~~~~~~~~~~~~~a~~c~~~L 256 (1268)
++|+||||||||||||||+||+++|. .|||+||++|+++||||+.|.+||..|++..+... .++++++||.+|+++|
T Consensus 115 ~~~~LrdEiy~Ql~kQ~t~n~~~~s~~~~r~W~Ll~~~~~~f~Ps~~~~~~l~~~l~~~~~~~-~~~~~~~~a~~c~~~L 193 (555)
T 3au4_A 115 DLRPLRDELYCQLIKQTNKVPHPGSVGNLYSWQILTCLSCTFLPSRGILKYLKFHLKRIREQF-PGTEMEKYALFTYESL 193 (555)
T ss_dssp HCTHHHHHHHHHHHHHTSSCSSTTCHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHS-TTSHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC-CCCCHHHHHHHHHHHH
T ss_conf 455356689999999700897975377889999999998146995899999999998643336-8862789999999999
Q ss_pred HHHHCCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHCCCC-CCCEEEEEEEEEECC
Q ss_conf 9541049999999999899998299614899953993799982156698999999998819988-886388997222038
Q 000820 257 KRSVKAGPRHTIPGREEIEALLTGRKLTTIVFFLDETFEEISYDMATTVSDAVEELAGIIKLSA-HSSFSLFECRKVVTG 335 (1268)
Q Consensus 257 ~r~~~~g~R~~~Ps~~Ei~ai~~~~~~~~~V~l~dg~~~~v~id~~ttv~evi~~i~~~l~L~~-~~~F~L~~~~~~~~~ 335 (1268)
.|+ |+|++|||..||+|+..++++.++|+|+||+...+.+++++|+.|+++.||.++||.+ .++||||...
T Consensus 194 ~rt---g~R~~~Ps~~Ei~a~~~~~~~~~~V~l~dg~~~~~~v~~~tt~~el~~~v~~~lgL~e~~~~FgL~~~~----- 265 (555)
T 3au4_A 194 KKT---KCREFVPSRDEIEALIHRQEMTSTVYCHGGGSCKITINSHTTAGEVVEKLIRGLAMEDSRNMFALFEYN----- 265 (555)
T ss_dssp TTC---CCCSSCCCHHHHHHHHTTCCEEEEEEETTSCEEEEEECTTCBHHHHHHHHHHHTTCTTCCSEEEEEEES-----
T ss_pred HHC---CCCCCCCCHHHHHHHHHCCCCCEEEEECCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEE-----
T ss_conf 735---998879799999999858985068996599869999378885999999999982998788852899991-----
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC
Q ss_conf 98888998730037995069889999998231289820358999985146776667788214345698745436448544
Q 000820 336 SKASDHDNEEYIGLDDNKYIGDLLAEFKAAKDRSKGEILHCKLTFKKKLFRESDEAISEPMFVQLSYVQLQHDYVLGNYP 415 (1268)
Q Consensus 336 ~~~~~~~~~~~~~L~~~~~i~D~l~~~e~~~~~~~~~~~~~~l~frr~~f~~~~~~~~d~~~~~l~Y~Q~~~d~l~G~~~ 415 (1268)
+...++|+++++++|++.+|+...........+++|+||+++|.++.....|+++++|+|.|+++||+.|+||
T Consensus 266 -------~~~~~~L~~~~~i~D~~~~we~~~~~~~~~~~~~~l~fR~~ff~~~~~~~~d~~~~~lly~Q~~~dil~G~~~ 338 (555)
T 3au4_A 266 -------GHVDKAIESRTVVADVLAKFEKLAATSEVGDLPWKFYFKLYCFLDTDNVPKDSVEFAFMFEQAHEAVIHGHHP 338 (555)
T ss_dssp -------SSCEEECCTTSBHHHHHHHHHHHTTSCCTTCCCCEEEEEEEECSCCTTCCTTSHHHHHHHHHHHHHHHTTCSC
T ss_pred -------CCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
T ss_conf -------8856862898743489999998740257788762799988754575567865487774499989999779878
Q ss_pred CCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCHHHHHH------------------------HCHHHH-----
Q ss_conf 793219999999999984898999885743433026543245511------------------------008999-----
Q 000820 416 VGRDDAAQLSALQILVEIGFVGSPESCNDWTSLLERFLPRQVAIT------------------------RAKREW----- 466 (1268)
Q Consensus 416 ~~~e~a~~LAAL~~q~~~Gd~~~~~~~~~~~~~l~~~lP~~~~~~------------------------~~~~~w----- 466 (1268)
|+.+++++||||++|+++||++..... ..+..|+|..++.. ...++|
T Consensus 339 ~~~e~a~~LAAl~lQ~~~GD~~~~~~~----~~l~~~lP~~~l~~~~~~~~k~~s~~~~~l~~~~~~~~~~~~~W~~~~~ 414 (555)
T 3au4_A 339 APEENLQVLAALRLQYLQGDYTLHAAI----PPLEEVYSLQRLKARISQSTKTFSFRTGSVVRQKVEEEQMLDMWIKEEV 414 (555)
T ss_dssp CCHHHHHHHHHHHHHHHHCSCCTTCCC----CCGGGTSCCHHHHHHHHHTTCCEECCTTSCCEECCCCHHHHHHHTHHHH
T ss_pred CCHHHHHHHHHHHHHHHCCCCCCCCCH----HHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 999999999999999972897621103----5666638788862210233321123555322122112210788898888
Q ss_pred ---HHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCEEEEEEECCCEEEECCCCCCHHCCC
Q ss_conf ---99999999816799998999999999940999980369998544999999961999980582289788850111003
Q 000820 467 ---ELDILSRYRSMEHLTKDDARQQFLRILRTLPYGNSVFFSVRKIDDPIGLLPGRIVLGINKRGVHFFRPVPKEYLHSA 543 (1268)
Q Consensus 467 ---~~~I~~~~~~l~~~s~~~Ak~~fL~~~~~~p~fGs~~F~v~~~~~~~~~~p~~i~LgIn~~Gi~il~~~~~e~l~~~ 543 (1268)
...|...|++++|+++.+|+..||+++++||+||++||.|+...+. +|..+|||||+.||+++++.+++++..|
T Consensus 415 ~~~~~~I~~~~~~~~g~s~~eA~~~yL~~~~~lp~yG~~~F~v~~~~~~---~~~~l~LgV~~~GI~v~~~~~k~~l~~~ 491 (555)
T 3au4_A 415 SSARASIIDKWRKFQGMNQEQAMAKYMALIKEWPGYGSTLFDVECKEGG---FPQELWLGVSADAVSVYKRGEGRPLEVF 491 (555)
T ss_dssp HHHHHHHHHHHHTTTTCCHHHHHHHHHHHHTTSTTTTCEEEEEEEEESS---SCSEEEEEECSSEEEEEETTCSSCSEEE
T ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCC---CCCEEEEEECCCCEEEECCCCCEEEEEE
T ss_conf 9999999999987449999999999999998588767569999945889---9851999981363699778777168998
Q ss_pred CCCCEEECCC-CCCCEEEEEEECCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 3442320037-89815999998570118999818677999999999999999773101334579
Q 000820 544 ELRDIMQFGS-SNSAVFFKMRVAGVLHIFQFETKQGEEICVALQTHINDVMLRRYSKARSAATG 606 (1268)
Q Consensus 544 ~~~~I~~~~~-~~~~~~~~i~~~~~~~~~~fet~q~~eI~~li~~yi~~~~~~r~~~~~~~~~g 606 (1268)
+|++|.+|+. ..+ .|.|..++. .|.|+|++|.+|..||.+|++.++.+|++...+++..
T Consensus 492 ~~~~I~~~~~~~~~--~f~i~~~~~--~l~f~T~qa~~i~~LI~~Yi~~l~~~r~~~~~~~~~~ 551 (555)
T 3au4_A 492 QYEHILSFGAPLAN--TYKIVVDER--ELLFETSEVVDVAKLMKAYISMIVKKRYSTTRSASSQ 551 (555)
T ss_dssp EGGGEEEEEEEETT--EEEEEETTE--EEEEECTTHHHHHHHHHHHHHHHHHHHCC--------
T ss_pred EHHHEEEECCCCCC--EEEEEECCC--EEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 81114041589998--799998891--8999789799999999999999998521357755445
No 3
>3pvl_A Myosin VIIA isoform 1; protein complex, novel folding, protein cargo binding, cargo proteins, motor protein-protein transport complex; 2.80A {Mus musculus}
Probab=1.00 E-value=1 Score=680.80 Aligned_cols=474 Identities=20% Similarity=0.317 Sum_probs=401.5
Q ss_pred CCHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCH-HHHHHHHHHHHHHHHC
Q ss_conf 000001025899999974202577654445777532455683342201167777645689932-3899999999999841
Q 000820 72 LIDRFQVEGFLRMMQKQIQSAGKRGFFSKKSTGAYVREKFTFEDMLCFQKDPIPTSLLKLNSD-LVSRATKLFQIILKYM 150 (1268)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~k~pi~~~Ll~~~~~-~~~~A~~~f~~il~~m 150 (1268)
+++.|++ .+|+..||+.+. -..|.+.||++|||.++++ +...|+.+|..||+||
T Consensus 31 d~~~~~f---~kfa~~yf~~~~----------------------~~~~~~~~l~~pll~~~~~~d~~~al~~~~~ilrfm 85 (655)
T 3pvl_A 31 DLSEYKF---AKFAATYFQGTT----------------------THSYTRRPLKQPLLYHDDEGDQLAALAVWITILRFM 85 (655)
T ss_dssp CCTTCCH---HHHHHHHBCCSS----------------------CSSCCCSCCSSCSBCCSSHHHHHHHHHHHHHHHHHH
T ss_pred CHHHCCH---HHHHHHHHCCCC----------------------CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 6343888---889999837677----------------------642014635565555898053899999999999986
Q ss_pred CCCCCCCCC-------------------------------------------------------CCCCHHHHHHHHHHHH
Q ss_conf 989899989-------------------------------------------------------9992356889999999
Q 000820 151 GVESSDRVT-------------------------------------------------------PPSLDERIDFVGKLYK 175 (1268)
Q Consensus 151 g~~~~~~~~-------------------------------------------------------~~~~~~~~~~~~~i~~ 175 (1268)
||.|-.... ......+++.+++|++
T Consensus 86 gd~~ep~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~~ 165 (655)
T 3pvl_A 86 GDLPEPKYHTAMSDGSEKIPVMTKIYETLGKKTYKRELQALQGEGEVTKRLNDGESTVQGNSMLEDRPTSNLEKLHFIIG 165 (655)
T ss_dssp TSSCCCCCC--------CCCHHHHHHTTTTCCCCHHHHHTTC----------------CCCTTSCSSCCCHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 36775322222234556870688888764633223310232101344443046420013554222355430699999999
Q ss_pred HHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
Q ss_conf 75134367216899997621899990248889999998532469990158999999972115876532435899999999
Q 000820 176 HTLKRVELRDELFAQISKQTRNNPDRQCLIKAWELMYLCASSMPPSKDMGGYLTEYVHNVAQGIIIDSEVQTLALNTLNA 255 (1268)
Q Consensus 176 ~~~~~~~LrDEiy~Ql~KQ~t~np~~~s~~r~W~Ll~~~~~~f~PS~~l~~~l~~~l~~~~~~~~~~~~~~~~a~~c~~~ 255 (1268)
.|+.+|+||||||||||||||+||+++|+.|||+||++|++|||||+.|.+||.+||++.+. .||.+|+++
T Consensus 166 ~~~~~~~LrDEiycQl~kQ~t~np~~~s~~rgW~Ll~l~~~~f~Ps~~~~~yl~~~l~~~~~---------~~a~~c~~~ 236 (655)
T 3pvl_A 166 NGILRPALRDEIYCQISKQLTHNPSKSSYARGWILVSLCVGCFAPSEKFVKYLRNFIHGGPP---------GYAPYCEER 236 (655)
T ss_dssp HHHHCGGGHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHCCCCTTTHHHHHHHHHTSCT---------TTHHHHHHH
T ss_pred HHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCH---------HHHHHHHHH
T ss_conf 87267312317999999984369986799999999999985649948999999999970858---------899999999
Q ss_pred HHHHHCCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEEECC
Q ss_conf 99541049999999999899998299614899953993799982156698999999998819988886388997222038
Q 000820 256 LKRSVKAGPRHTIPGREEIEALLTGRKLTTIVFFLDETFEEISYDMATTVSDAVEELAGIIKLSAHSSFSLFECRKVVTG 335 (1268)
Q Consensus 256 L~r~~~~g~R~~~Ps~~Ei~ai~~~~~~~~~V~l~dg~~~~v~id~~ttv~evi~~i~~~l~L~~~~~F~L~~~~~~~~~ 335 (1268)
|+||.++|+|++|||..||+|+..++++.++|+|+||+...+.++++||++|+++.||.++||.+..+||||....
T Consensus 237 L~rt~~~g~R~~~Ps~~Ei~Ai~~~~~i~~~V~llDgt~~~~~vds~Tt~~ell~~V~~~LgL~e~~~FgL~~~~~---- 312 (655)
T 3pvl_A 237 LRRTFVNGTRTQPPSWLELQATKSKKPIMLPVTFMDGTTKTLLTDSATTARELCNALADKISLKDRFGFSLYIALF---- 312 (655)
T ss_dssp HHHHHHHCCCSSCCCHHHHHHHHHTCCEEEEEEETTSCEEEEEECTTCBHHHHHHHHHHHTTCSSCTTEEEEEEET----
T ss_pred HHHHHCCCCCCCCCCHHHHHHHHCCCCEEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCEEEEECC----
T ss_conf 8886237888769997999988708966999980289368999826881999999999971986445630488538----
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC--CCEEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
Q ss_conf 98888998730037995069889999998231289--8203589999851467766677882143456987454364485
Q 000820 336 SKASDHDNEEYIGLDDNKYIGDLLAEFKAAKDRSK--GEILHCKLTFKKKLFRESDEAISEPMFVQLSYVQLQHDYVLGN 413 (1268)
Q Consensus 336 ~~~~~~~~~~~~~L~~~~~i~D~l~~~e~~~~~~~--~~~~~~~l~frr~~f~~~~~~~~d~~~~~l~Y~Q~~~d~l~G~ 413 (1268)
+....++.++++++|++++|+....... ....+++|+||+++|.+++....|+++++|+|.|+++||+.|+
T Consensus 313 -------dk~~sll~~~e~vlD~l~~~E~~~k~~~~~~~~~~~~L~FRvkff~p~~~~~~d~it~~LlYlQ~k~dIl~Gr 385 (655)
T 3pvl_A 313 -------DKVSSLGSGSDHVMDAISQCEQYAKEQGAQERNAPWRLFFRKEVFTPWHNPSEDNVATNLIYQQVVRGVKFGE 385 (655)
T ss_dssp -------TEEEEEETSSCBHHHHHHHHHHHHHTTTCCGGGCCCEEEEEECCCCTTCCGGGCHHHHHHHHHHHHHHHHHTS
T ss_pred -------CCEEECCCCCEEEECHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCC
T ss_conf -------8646614686286418899999988641346788759999999845875433477899999999856501675
Q ss_pred CCCCHH-HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCHHHHHH-HCHHHHHHHHHHHHHHC----CCCCHHHHHH
Q ss_conf 447932-19999999999984898999885743433026543245511-00899999999999816----7999989999
Q 000820 414 YPVGRD-DAAQLSALQILVEIGFVGSPESCNDWTSLLERFLPRQVAIT-RAKREWELDILSRYRSM----EHLTKDDARQ 487 (1268)
Q Consensus 414 ~~~~~e-~a~~LAAL~~q~~~Gd~~~~~~~~~~~~~l~~~lP~~~~~~-~~~~~w~~~I~~~~~~l----~~~s~~~Ak~ 487 (1268)
|||+.+ ++++||||++|+++||++... .....+++|+|..++.. +..++|...|...|+++ .|+++.+|+.
T Consensus 386 lpc~~E~~a~~LAAl~~Qae~Gd~~~~~---~~~~~L~~~lP~~~l~~~~~~~~w~~~I~~~hkk~~~~~~g~s~~eAk~ 462 (655)
T 3pvl_A 386 YRCEKEDDLAELASQQYFVDYGSEMILE---RLLSLVPTYIPDREITPLKNLEKWAQLAIAAHKKGIYAQRRTDSQKVKE 462 (655)
T ss_dssp SCCSSHHHHHHHHHHHHHHHHTTCCCHH---HHHHHHHHHSCGGGCCSSSCHHHHHHHHHHHHHHHHHTTCSSCHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHCCCCCHH---HHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
T ss_conf 6798299999999999999848886414---4788998758998875458999999999999986113345899899999
Q ss_pred HHHHHH-HCCCCCCEEEEEEEEECCCCCCCC-CEEEEEEECCCEEEECCCCCCHHCCCCCCCEEECCCCCCC----EEEE
Q ss_conf 999999-409999803699985449999999-6199998058228978885011100334423200378981----5999
Q 000820 488 QFLRIL-RTLPYGNSVFFSVRKIDDPIGLLP-GRIVLGINKRGVHFFRPVPKEYLHSAELRDIMQFGSSNSA----VFFK 561 (1268)
Q Consensus 488 ~fL~~~-~~~p~fGs~~F~v~~~~~~~~~~p-~~i~LgIn~~Gi~il~~~~~e~l~~~~~~~I~~~~~~~~~----~~~~ 561 (1268)
+||+++ ++||+||++||.|+...++. .| ..+|||||+.||+|++++++..+ .|+|++|.+|++..+. ..|.
T Consensus 463 ~yL~~a~~~lp~YG~~fF~vk~~~g~~--lp~~~l~LgVn~~GV~v~d~~~k~ll-~f~~~eI~~is~~~~~~~~~~~ft 539 (655)
T 3pvl_A 463 DVVNYARFKWPLLFSRFYEAYKFSGPP--LPKSDVIVAVNWTGVYFVDEQEQVLL-ELSFPEIMAVSSSRGTKMMAPSFT 539 (655)
T ss_dssp HHHHHHHHHCTTTSCEEEEEEEEESSC--CSCSEEEEEEETTEEEEECTTCCEEE-EEEGGGEEEEEEECCCSSSCCEEE
T ss_pred HHHHHHHHHCCCCCCEEEEEEECCCCC--CCCCCEEEEECCCCEEEECCCCCEEE-EECHHHCEEEECCCCCCCCCCEEE
T ss_conf 999999974621184899999557887--77764799984782699858874577-861368257834676556654799
Q ss_pred EEECCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9985701189998186779999999999999997731
Q 000820 562 MRVAGVLHIFQFETKQGEEICVALQTHINDVMLRRYS 598 (1268)
Q Consensus 562 i~~~~~~~~~~fet~q~~eI~~li~~yi~~~~~~r~~ 598 (1268)
+.... ...|.|+|++|.+|.+||.+|++ .+.+|..
T Consensus 540 l~~~~-~~~~~F~T~~a~~I~~LI~~yi~-~Lk~rs~ 574 (655)
T 3pvl_A 540 LATIK-GDEYTFTSSNAEDIRDLVVTFLE-GLRKRSK 574 (655)
T ss_dssp EEETT-SCEEEEECTTHHHHHHHHHHHHH-HHHHHCC
T ss_pred EEECC-CCEEEEECCCHHHHHHHHHHHHH-HHHHCCH
T ss_conf 99345-86699980889999999999999-9852425
No 4
>4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae}
Probab=1.00 E-value=1 Score=673.37 Aligned_cols=366 Identities=40% Similarity=0.636 Sum_probs=317.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCC-CCCCCCCEEEEECCC------CEEE
Q ss_conf 999999999998999999876999999852000011123553041001599832-322378169970797------2232
Q 000820 852 EQTAAILKMQGAQLSELEVLYKEEQILRKRYFNTIEDMKGKIRVYCRLRPLNEK-EDAEKERYVLTSLDE------FTVE 924 (1268)
Q Consensus 852 ~~~~~~~~~~~~~~~~L~e~~~~~~~~r~kl~~~ie~~k~~i~v~~rirp~~~~-e~~~~~~~~~~~~~~------~~~~ 924 (1268)
.++.....+++..+.++.+.+.+++..|++|+|.+++++|+|+||+|+||+.+. |........+...+. ..+.
T Consensus 20 ~~l~~~~~~~~~~~~~~~~~~~~~~~~rr~l~n~~~elkgnIrV~vRvRP~~~~~e~~~~~~~~v~~~~~~~~~~~~~~~ 99 (403)
T 4etp_A 20 AALKEKIKDTELGMKELNEILIKEETVRRTLHNELQELRGNIRVYLRIRPALKNLENSDTSLINVNEFDDNSGVQSMEVT 99 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSEEEEEEECCCCTTTSCSCCTTEEECCCBTTTTBEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCEEEEEE
T ss_conf 99999999999999999999999999999999899971898699999088997634467870687403677884379982
Q ss_pred CCCCCCCCEEEEECCCCCCCCCHHHHHHCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 24789981136704103898884558730799999975564167984213478754212458999997078999999998
Q 000820 925 HPWKDDKVKQHMYDQVFDGYATQEDVFEDTRYLVQSAVDGYNVCIFAYGQTGSGKTFTIYGSECNPGITPRAISELFRIL 1004 (1268)
Q Consensus 925 ~~~~~~~~~~~~fd~vf~~~~~q~~v~~~~~~lv~~~~~G~n~~i~ayG~tgsGKT~tl~G~~~~~Gii~r~~~~lf~~~ 1004 (1268)
........+.|.||+||+++++|++||+.+.|+|+++++|||+||||||||||||||||+|++ +|||||++++||..+
T Consensus 100 ~~~~~~~~~~F~FD~VF~~~~~Q~~Vf~~v~~lv~~~l~G~N~tifAYGqTGSGKTyTM~g~~--~Giipr~~~~lF~~i 177 (403)
T 4etp_A 100 KIQNTAQVHEFKFDKIFDQQDTNVDVFKEVGQLVQSSLDGYNVAIFAYGQTGSGKTFTMLNPG--DGIIPSTISHIFNWI 177 (403)
T ss_dssp ECSSSCEEEEEEESEEECTTCCHHHHHHHHHHHHHHHHTTCCEEEEEESCTTSSHHHHHHCTT--TSHHHHHHHHHHHHH
T ss_pred CCCCCCCCEEEECCEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEECCCC--CCCCHHHHHHHHHHH
T ss_conf 678876756877688979988658999999999999858961699997779999836747999--863214799999888
Q ss_pred HHC-CCCEEEEEEEEEEEECCCCCCCCCCCCCC------CCCCEEEEECC-CCCEEECCCEEEECCCHHHHHHHHHHCCC
Q ss_conf 733-89629999999434314620247898764------46523798589-99577359389992798799999981002
Q 000820 1005 KKE-NNKFSFSLKAYMVELYQDTLVDLLLPRNE------KRLKLEIKKDS-KGMVLVENVTVVPISTFEEIKSIIQRGSD 1076 (1268)
Q Consensus 1005 ~~~-~~~~~~~v~~s~~eiy~e~v~DLL~~~~~------~~~~~~i~~~~-~~~~~~~~~~~~~v~s~~~~~~~l~~~~~ 1076 (1268)
... ...+.|.|++||+|||||+|+|||.+.+. ....+.++.++ .++++|.|++++.|.++++++.++..|..
T Consensus 178 ~~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~~~~~~~~~~i~~~~~~~~~~v~~l~~~~v~s~~e~~~ll~~g~~ 257 (403)
T 4etp_A 178 NKLKTKGWDYKVNAEFIEIYNENIVDLLRSDNNNKEDTSIGLKHEIRHDQETKTTTITNVTSVKLESEEMVEIILKKANK 257 (403)
T ss_dssp HHHHTTTEEEEEEEEEEEEETTEEEETTCC--------CCSCCCCEEEETTTTEEEETTCCCEECCCHHHHHHHHHHHC-
T ss_pred HHHHCCCCEEEEEEEEEEEECCEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCEEECCCEEEEECCHHHHHHHHHHHHH
T ss_conf 76403683489999999983661468567766554445667650368707999788368179991999999999999997
Q ss_pred CCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 54434567888889853389999998405877266789999966899654577992235999999749799999999996
Q 000820 1077 QRHTSGTQMNEESSRSHLILSIVIESTNLQTQSVARGKLSFVDLAGSERVKKSGSSGNQLKEAQSINKSLSALGDVISAL 1156 (1268)
Q Consensus 1077 ~r~~~~t~~n~~ssrsH~i~~i~i~~~~~~~~~~~~s~l~~vDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~al 1156 (1268)
+|++++|.+|..|||||+||+|++.+.+...+....|+|+|||||||||..++++.|.+++|+.+||+||++||+||.||
T Consensus 258 ~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~~~~kL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL 337 (403)
T 4etp_A 258 LRSTASTASNEHSSRSHSIFIIHLSGSNAKTGAHSYGTLNLVDLAGSERINVSQVVGDRLRETQNINKSLSALGDVIHAL 337 (403)
T ss_dssp -C----CHHHHHHHTSEEEEEEEEEEEETTTCCEEEEEEEEEECCCCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 34434454776567764279999998606889766899999979998644456770488999999878899999999998
Q ss_pred HCCCC---CCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 07999---9988787422223456788853139998289988889999999999985115357777
Q 000820 1157 SSGSQ---HIPYRNHKLTMLMSDSLGGNAKTLMFVNVSPAESNLEESYNSLTYASRVRSIVNDPNK 1219 (1268)
Q Consensus 1157 ~~~~~---~ipyr~skLT~lL~~~lgg~~~~~~i~~isp~~~~~~etl~tL~~a~r~~~i~~~~~~ 1219 (1268)
+.+.. ||||||||||+||||+|||||+|+||+||||+..+++||++||+||+|++.|+..|.+
T Consensus 338 ~~~~~~~~hiPyRdSkLT~LLqdsLgGnskt~mi~~vsP~~~~~~ETl~TL~fA~rv~~~~~~~rk 403 (403)
T 4etp_A 338 GQPDSTKRHIPFRNSKLTYLLQYSLTGDSKTLMFVNISPSSSHINETLNSLRFASKVNSTRLVSRK 403 (403)
T ss_dssp TSSCTTTSCCCGGGSHHHHHTGGGTSTTCEEEEEEEECCSGGGHHHHHHHHHHHHHHCCC------
T ss_pred HCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 614689986774566688987986289964999999379633489999999999997105267899
No 5
>3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A*
Probab=1.00 E-value=1 Score=667.17 Aligned_cols=353 Identities=39% Similarity=0.589 Sum_probs=310.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEECCCCEEECCCCC------CCCEE
Q ss_conf 998999999876999999852000011123553041001599832322378169970797223224789------98113
Q 000820 861 QGAQLSELEVLYKEEQILRKRYFNTIEDMKGKIRVYCRLRPLNEKEDAEKERYVLTSLDEFTVEHPWKD------DKVKQ 934 (1268)
Q Consensus 861 ~~~~~~~L~e~~~~~~~~r~kl~~~ie~~k~~i~v~~rirp~~~~e~~~~~~~~~~~~~~~~~~~~~~~------~~~~~ 934 (1268)
+...+..+.+++.+++..|++|.|.+++++|+|+||+|+||+.+.|....... +...+..++.....+ ...+.
T Consensus 29 ~~~~~~~~~~~l~~~~~~rr~l~n~~~~l~gnIrV~vRvRP~~~~E~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~~~ 107 (412)
T 3u06_A 29 QAAELETCKEQLFQSNMERKELHNTVMDLRDNIRVFCRIRPPLESEENRMCCT-WTYHDESTVELQSIDAQAKSKMGQQI 107 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSEEEEEEECCCCGGGTTSCBCE-EEEEETTEEEEECCC-------CCCE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHCCCCCEE-EEECCCCEEEEECCCCCCCCCCCCEE
T ss_conf 99999999999999999999988788871799799998489981002676128-99369987998057854456668637
Q ss_pred EEECCCCCCCCCHHHHHHCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC-CCCEEE
Q ss_conf 6704103898884558730799999975564167984213478754212458999997078999999998733-896299
Q 000820 935 HMYDQVFDGYATQEDVFEDTRYLVQSAVDGYNVCIFAYGQTGSGKTFTIYGSECNPGITPRAISELFRILKKE-NNKFSF 1013 (1268)
Q Consensus 935 ~~fd~vf~~~~~q~~v~~~~~~lv~~~~~G~n~~i~ayG~tgsGKT~tl~G~~~~~Gii~r~~~~lf~~~~~~-~~~~~~ 1013 (1268)
|.||+||+++++|++||+.+.|+|+++++|||+||||||||||||||||+|+..++|||||++++||..+... ...+.|
T Consensus 108 F~FD~VF~~~~~Q~~Vf~~v~plv~~~l~G~n~tifAYGqTGSGKTyTM~G~~~~~Giipr~~~~lF~~i~~~~~~~~~~ 187 (412)
T 3u06_A 108 FSFDQVFHPLSSQSDIFEMVSPLIQSALDGYNICIFAYGQTGSGKTYTMDGVPESVGVIPRTVDLLFDSIRGYRNLGWEY 187 (412)
T ss_dssp EECSEEECTTCCHHHHHTTTHHHHHHHHTTCCEEEEEESSTTSSHHHHHTEETTEECHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred EEECEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCEE
T ss_conf 76086818999788999999999999977974479974589999716736778878667899999998653420368348
Q ss_pred EEEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCEEECCCEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99999434314620247898764465237985899957735938999279879999998100254434567888889853
Q 000820 1014 SLKAYMVELYQDTLVDLLLPRNEKRLKLEIKKDSKGMVLVENVTVVPISTFEEIKSIIQRGSDQRHTSGTQMNEESSRSH 1093 (1268)
Q Consensus 1014 ~v~~s~~eiy~e~v~DLL~~~~~~~~~~~i~~~~~~~~~~~~~~~~~v~s~~~~~~~l~~~~~~r~~~~t~~n~~ssrsH 1093 (1268)
.|++||+|||||+|+|||.+... ...+.+.+++.++++|.|++++.|.+.++++.++..|..+|++++|.+|..|||||
T Consensus 188 ~v~vS~~EIYnE~i~DLL~~~~~-~~~i~~~~~~~~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH 266 (412)
T 3u06_A 188 EIKATFLEIYNEVLYDLLSNEQK-DMEIRMAKNNKNDIYVSNITEETVLDPNHLRHLMHTAKMNRATASTAGNERSSRSH 266 (412)
T ss_dssp EEEEEEEEEETTEEEETTCCSCC-CCCEEECSSCTTSEEETTCCCEECCSHHHHHHHHHHHHHHCC-----CHHHHTTCE
T ss_pred EEEEEEEEEECCEEEECCCCCCC-CCEEEEEECCCCCEEECCEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCE
T ss_conf 87778999967745786788788-86355303589988973607999499999999999997435423467988776732
Q ss_pred CEEEEEEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 38999999840587726678999996689965457799223599999974979999999999607999998878742222
Q 000820 1094 LILSIVIESTNLQTQSVARGKLSFVDLAGSERVKKSGSSGNQLKEAQSINKSLSALGDVISALSSGSQHIPYRNHKLTML 1173 (1268)
Q Consensus 1094 ~i~~i~i~~~~~~~~~~~~s~l~~vDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~al~~~~~~ipyr~skLT~l 1173 (1268)
+||+|.+.+.+........|+|+||||||||+.. .+.+++|+.+||+||++||+||.||+.+..||||||||||+|
T Consensus 267 ~if~i~v~~~~~~~~~~~~~kL~lVDLAGSEr~~----~~~rl~E~~~INkSL~aLg~vI~aL~~~~~hiPyRdSkLT~L 342 (412)
T 3u06_A 267 AVTKLELIGRHAEKQEISVGSINLVDLAGSESPK----TSTRMTETKNINRSLSELTNVILALLQKQDHIPYRNSKLTHL 342 (412)
T ss_dssp EEEEEEEEEEETTTTEEEEEEEEEEECCCCCC--------------CTTTHHHHHHHHHHHHHHTTCSCCCGGGSHHHHH
T ss_pred EEEEEEEEEEECCCCCEEEEEEEEEECCCCCCCC----CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH
T ss_conf 9999999997078897888999999899777677----663047688775889999999999863588887324378898
Q ss_pred CCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 3456788853139998289988889999999999985115357777
Q 000820 1174 MSDSLGGNAKTLMFVNVSPAESNLEESYNSLTYASRVRSIVNDPNK 1219 (1268)
Q Consensus 1174 L~~~lgg~~~~~~i~~isp~~~~~~etl~tL~~a~r~~~i~~~~~~ 1219 (1268)
|+|+|||||+|+||+||||+..+++||++||+||+|++.|+..+.+
T Consensus 343 LqdsLgGnskt~mI~~vsP~~~~~~ETl~TLrfA~rv~~i~~~~~~ 388 (412)
T 3u06_A 343 LMPSLGGNSKTLMFINVSPFQDCFQESVKSLRFAASVNSCKMTKAK 388 (412)
T ss_dssp HGGGTSTTCEEEEEEEECCBGGGHHHHHHHHHHHHHHHHHCC----
T ss_pred HHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 8986189966999999489733489999999999997432466662
No 6
>3bfn_A Kinesin-like protein KIF22; limited proteolysis, structural genomics consortium domain, ADP, SGC, ATP-binding, DNA-binding, microtubule, MO protein; HET: ADP; 2.30A {Homo sapiens}
Probab=1.00 E-value=1 Score=659.60 Aligned_cols=351 Identities=30% Similarity=0.545 Sum_probs=309.9
Q ss_pred CCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEECCCCEEE--CCCCCCCCEEEEECCCCCCCCCHHHHHHC-HHHHHH
Q ss_conf 000111235530410015998323223781699707972232--24789981136704103898884558730-799999
Q 000820 883 FNTIEDMKGKIRVYCRLRPLNEKEDAEKERYVLTSLDEFTVE--HPWKDDKVKQHMYDQVFDGYATQEDVFED-TRYLVQ 959 (1268)
Q Consensus 883 ~~~ie~~k~~i~v~~rirp~~~~e~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~fd~vf~~~~~q~~v~~~-~~~lv~ 959 (1268)
........++|+|+||+||+.+.|...+...++...+..++. .+......+.|.||+||+++++|++||+. ++|+|+
T Consensus 13 ~~~~~~~~~~irV~vRvRP~~~~E~~~~~~~~v~~~~~~~~~i~~~~~~~~~~~f~FD~Vf~~~~tQ~~Vy~~~~~plv~ 92 (388)
T 3bfn_A 13 NLYFQGPPARVRVAVRLRPFVDGTAGASDPPCVRGMDSCSLEIANWRNHQETLKYQFDAFYGERSTQQDIYAGSVQPILR 92 (388)
T ss_dssp -CCSSSCCCCCEEEEEECCCC-----------------------------CEEEEECSEEECTTCCHHHHHHHHTGGGHH
T ss_pred CCCCCCCCCCEEEEEECCCCCHHHHCCCCCCEEEECCCCEEEEECCCCCCCEEEEECCEEECCCCCHHHHHHHHHHHHHH
T ss_conf 34456899997999977989914534699863995599859995688887705987236956789775778998888888
Q ss_pred HHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC---CCCEEEEEEEEEEEECCCCCCCCCCCCCC
Q ss_conf 975564167984213478754212458999997078999999998733---89629999999434314620247898764
Q 000820 960 SAVDGYNVCIFAYGQTGSGKTFTIYGSECNPGITPRAISELFRILKKE---NNKFSFSLKAYMVELYQDTLVDLLLPRNE 1036 (1268)
Q Consensus 960 ~~~~G~n~~i~ayG~tgsGKT~tl~G~~~~~Gii~r~~~~lf~~~~~~---~~~~~~~v~~s~~eiy~e~v~DLL~~~~~ 1036 (1268)
++++|||+||||||||||||||||+|+..++|||||++++||..+... ...+.|.|++||+|||||+|+|||.|..
T Consensus 93 ~~l~G~N~tifAYGqTGSGKTyTM~G~~~~~Giipra~~~lF~~i~~~~~~~~~~~~~V~vS~lEIYnE~i~DLL~~~~- 171 (388)
T 3bfn_A 93 HLLEGQNASVLAYGPTGAGKTHTMLGSPEQPGVIPRALMDLLQLTREEGAEGRPWALSVTMSYLEIYQEKVLDLLDPAS- 171 (388)
T ss_dssp HHTTTCCEEEEEESCTTSSHHHHHTBCSSSBCHHHHHHHHHHHHHHHHTSTTCSEEEEEEEEEEEEETTEEEESSSCSS-
T ss_pred HHHCCCEEEEEEECCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCEEEEHHCCCC-
T ss_conf 7616965667611688899976865675566416899999999998742337771489999999998886456001678-
Q ss_pred CCCCEEEEECCCCCEEECCCEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCC-CCEEEEEE
Q ss_conf 46523798589995773593899927987999999810025443456788888985338999999840587-72667899
Q 000820 1037 KRLKLEIKKDSKGMVLVENVTVVPISTFEEIKSIIQRGSDQRHTSGTQMNEESSRSHLILSIVIESTNLQT-QSVARGKL 1115 (1268)
Q Consensus 1037 ~~~~~~i~~~~~~~~~~~~~~~~~v~s~~~~~~~l~~~~~~r~~~~t~~n~~ssrsH~i~~i~i~~~~~~~-~~~~~s~l 1115 (1268)
..+.|++++.++++|.|++++.|.++++++.++..|..+|++++|.+|..|||||+||+|.+++.+... .....|+|
T Consensus 172 --~~l~ired~~~~v~v~gl~~~~V~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~If~i~v~~~~~~~~~~~~~skL 249 (388)
T 3bfn_A 172 --GDLVIREDCRGNILIPGLSQKPISSFADFERHFLPASRNRTVGATRLNQRSSRSHAVLLVKVDQRERLAPFRQREGKL 249 (388)
T ss_dssp --CBCCCEECTTSCEECTTCCCEECCSHHHHHHHHHHHTC-----------CGGGSEEEEEEEEEEEESSTTCCEEEEEE
T ss_pred --CCCEEEECCCCCEEECCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCEEEEEE
T ss_conf --884599869999885360599958999999999997502652236477877777399999999822688873368899
Q ss_pred EEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCC
Q ss_conf 99966899654577992235999999749799999999996079999988787422223456788853139998289988
Q 000820 1116 SFVDLAGSERVKKSGSSGNQLKEAQSINKSLSALGDVISALSSGSQHIPYRNHKLTMLMSDSLGGNAKTLMFVNVSPAES 1195 (1268)
Q Consensus 1116 ~~vDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~al~~~~~~ipyr~skLT~lL~~~lgg~~~~~~i~~isp~~~ 1195 (1268)
+|||||||||..++++.|.+++|+.+||+||++|++||.+|+.+..||||||||||+||||+|||||+|+||+||||+..
T Consensus 250 ~lVDLAGSEr~~~t~~~g~rlkE~~~INkSL~aLg~vI~aL~~~~~hVPYRdSkLTrlLqdsLgGnskT~mIa~iSP~~~ 329 (388)
T 3bfn_A 250 YLIDLAGSEDNRRTGNKGLRLKESGAINTSLFVLGKVVDALNQGLPRVPYRDSKLTRLLQDSLGGSAHSILIANIAPERR 329 (388)
T ss_dssp EEEECCCTTC--------------CCCCHHHHHHHHHHHHHHTTCSCCCGGGSHHHHHTTTSSSTTCEEEEEEEECCSGG
T ss_pred EEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCC
T ss_conf 99989877665545675511477767506399999999999669998867565889999986089962899999798500
Q ss_pred CHHHHHHHHHHHHHHCCCCCCCCCCCCHH--HHHHHHHHHHHH
Q ss_conf 88999999999998511535777778969--999999999999
Q 000820 1196 NLEESYNSLTYASRVRSIVNDPNKNVSSK--EVARLKRLVAYW 1236 (1268)
Q Consensus 1196 ~~~etl~tL~~a~r~~~i~~~~~~~~~~~--~~~~l~~~~~~~ 1236 (1268)
+++||++||+||+|++.|+|+|.+|.+.. .+..+|+....+
T Consensus 330 ~~~ETlsTLrfA~rak~I~n~p~~n~~~~~~~l~~~k~~~~~l 372 (388)
T 3bfn_A 330 FYLDTVSALNFAARSKEVINRPFTNESLQPHALGPVKLSQKEL 372 (388)
T ss_dssp GHHHHHHHHHHHCSEEEEC------------------------
T ss_pred CHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 0899999999999985175767356789989998878899986
No 7
>2owm_A Nckin3-434, related to kinesin-like protein KIF1C; motor domain, ADP, NECK linker, motor PR; HET: ADP; 3.25A {Neurospora crassa}
Probab=1.00 E-value=1 Score=656.94 Aligned_cols=338 Identities=33% Similarity=0.567 Sum_probs=298.4
Q ss_pred CCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEECCC---CEEECCCC-------------CCCCEEEEECCCCCC-----
Q ss_conf 011123553041001599832322378169970797---22322478-------------998113670410389-----
Q 000820 885 TIEDMKGKIRVYCRLRPLNEKEDAEKERYVLTSLDE---FTVEHPWK-------------DDKVKQHMYDQVFDG----- 943 (1268)
Q Consensus 885 ~ie~~k~~i~v~~rirp~~~~e~~~~~~~~~~~~~~---~~~~~~~~-------------~~~~~~~~fd~vf~~----- 943 (1268)
...+.+++|+|+||+||+++.|...+..+++...+. .++..+.. ....+.|.||+||++
T Consensus 32 ~~~~~~~~vrV~vRvRP~~~~E~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~F~FD~vF~~~~~~~ 111 (443)
T 2owm_A 32 VSKDPGANVRVVVRVRAFLPRELERNAECIVEMDPATERTSLLVPQETDFADARGARSRRVLEEKSFTFDKSFWSHNTED 111 (443)
T ss_dssp --CCCCEECEEEEEEECCCHHHHHTTCCCCEEECSSSCEEEECCCC---------------CCCEEEECSEEEEESCTTS
T ss_pred CCCCCCCCEEEEEEECCCCHHHHHCCCCEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEECCEEECCCCCCC
T ss_conf 66789989499999399996886269945999758986279955887654333332123366772685273827877677
Q ss_pred --CCCHHHHHHCH-HHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC---CCCEEEEEEE
Q ss_conf --88845587307-99999975564167984213478754212458999997078999999998733---8962999999
Q 000820 944 --YATQEDVFEDT-RYLVQSAVDGYNVCIFAYGQTGSGKTFTIYGSECNPGITPRAISELFRILKKE---NNKFSFSLKA 1017 (1268)
Q Consensus 944 --~~~q~~v~~~~-~~lv~~~~~G~n~~i~ayG~tgsGKT~tl~G~~~~~Gii~r~~~~lf~~~~~~---~~~~~~~v~~ 1017 (1268)
.++|++||+.+ .|+|+++++|||+||||||||||||||||+|+..++|||||++++||..+... .....|.|++
T Consensus 112 ~~~asQ~~Vy~~~~~plv~~~l~GyN~tIfAYGQTGSGKTyTM~G~~~~~GIipr~~~~lF~~i~~~~~~~~~~~~~V~v 191 (443)
T 2owm_A 112 EHYATQEHVYDSLGEEFLDHNFEGYHTCIFAYGQTGSGKSYTMMGTPDQPGLIPRTCEDLFQRIASAQDETPNISYNVKV 191 (443)
T ss_dssp TTCCCHHHHHHHHHHHHHHHHHTTCCEEEEEESSTTSSHHHHHTCCTTSCCHHHHHHHHHHHHHHHTTTTSTTCEEEEEE
T ss_pred CCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEE
T ss_conf 65787999987632468888636874279986788999988864687777537999999999887652136773499999
Q ss_pred EEEEECCCCCCCCCCCCC--CCCCCEEEEECCCCCEEECCCEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCE
Q ss_conf 943431462024789876--446523798589995773593899927987999999810025443456788888985338
Q 000820 1018 YMVELYQDTLVDLLLPRN--EKRLKLEIKKDSKGMVLVENVTVVPISTFEEIKSIIQRGSDQRHTSGTQMNEESSRSHLI 1095 (1268)
Q Consensus 1018 s~~eiy~e~v~DLL~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~v~s~~~~~~~l~~~~~~r~~~~t~~n~~ssrsH~i 1095 (1268)
||+|||||+|+|||.|.. .....+.|++++.++++|.|++++.|.++++++.+|..|..+|++++|.+|..|||||+|
T Consensus 192 S~lEIYnE~i~DLL~~~~~~~~~~~l~ire~~~~g~~V~gl~e~~V~s~~e~~~ll~~G~~~R~~~~T~~N~~SSRSH~I 271 (443)
T 2owm_A 192 SYFEVYNEHVRDLLAPVVPNKPPYYLKVRESPTEGPYVKDLTEVPVRGLEEIIRWMRIGDGSRTVASTKMNDTSSRSHAV 271 (443)
T ss_dssp EEEEEETTEEEETTSCCCSSCCCCCCEEEEETTTEEEEETCCCEECCSHHHHHHHHHHHHTTSCBCSSSSSCBCTTEEEE
T ss_pred EEEEEECCEEEECCCCCCCCCCCCCCCEEECCCCCEECCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEE
T ss_conf 99999889756856763457865344303779999952687799828999999999999733786337587766777199
Q ss_pred EEEEEEEEECC----CCCEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC-----------
Q ss_conf 99999984058----772667899999668996545779922359999997497999999999960799-----------
Q 000820 1096 LSIVIESTNLQ----TQSVARGKLSFVDLAGSERVKKSGSSGNQLKEAQSINKSLSALGDVISALSSGS----------- 1160 (1268)
Q Consensus 1096 ~~i~i~~~~~~----~~~~~~s~l~~vDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~al~~~~----------- 1160 (1268)
|+|.+++.... ......|+|+|||||||||..++++.|.+++|+.+||+||++||+||.+|+.+.
T Consensus 272 fti~v~~~~~~~~~~~~~~~~skL~lVDLAGSER~~~t~~~g~rlkE~~~INkSL~aLg~vI~aL~~~~~~~~~~~~~~~ 351 (443)
T 2owm_A 272 FTIMLKQIHHDLETDDTTERSSRIRLVDLAGSERAKSTEATGQRLREGSNINKSLTTLGRVIAALADPKSSASRPSSPVK 351 (443)
T ss_dssp EEEEEEEEC-------CCEEEEEEEEEECCCCCC--------------CCSSHHHHHHHHHHHHHCC-------------
T ss_pred EEEEEEEEECCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf 99999986035678874068877999979887535656776641211001057899999999998604555554443222
Q ss_pred -----------CCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC-CHH
Q ss_conf -----------9998878742222345678885313999828998888999999999998511535777778-969
Q 000820 1161 -----------QHIPYRNHKLTMLMSDSLGGNAKTLMFVNVSPAESNLEESYNSLTYASRVRSIVNDPNKNV-SSK 1224 (1268)
Q Consensus 1161 -----------~~ipyr~skLT~lL~~~lgg~~~~~~i~~isp~~~~~~etl~tL~~a~r~~~i~~~~~~~~-~~~ 1224 (1268)
.||||||||||+||||+|||||+|+||+||||+ +++||++||+||+|||.|+|+|.+|. ++.
T Consensus 352 ~g~~~~~~~~~~hVPYRdSkLTrLLqdsLgGnskT~mIa~iSP~--~~~ETlsTLrfA~rak~I~n~~~vN~~d~~ 425 (443)
T 2owm_A 352 SGRGRTPGPANSVVPYRDSVLTWLLKDSLGGNSKTAMIACISPT--DYDETLSTLRYADQAKRIRTRAVVNQVDGV 425 (443)
T ss_dssp ------------CCCGGGSHHHHHSTTTTTSSCEEEEEEEECSS--CHHHHHHHHHHHHHHTTCEECCCCCCC---
T ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCC--CHHHHHHHHHHHHHHHHCCCCCEECCCCCC
T ss_conf 34333445677745574547688888862799708999981643--078999999999998544563335135776
No 8
>2y65_A Kinesin, kinesin heavy chain; motor protein; HET: ADP; 2.20A {Drosophila melanogaster} PDB: 2y5w_A*
Probab=1.00 E-value=1 Score=652.69 Aligned_cols=330 Identities=39% Similarity=0.609 Sum_probs=303.7
Q ss_pred CCCCCCCEEEECCCCCCCCCCCCCCCEEEEECC---CCEEECCCCCCCCEEEEECCCCCCCCCHHHHHHCH-HHHHHHHH
Q ss_conf 112355304100159983232237816997079---72232247899811367041038988845587307-99999975
Q 000820 887 EDMKGKIRVYCRLRPLNEKEDAEKERYVLTSLD---EFTVEHPWKDDKVKQHMYDQVFDGYATQEDVFEDT-RYLVQSAV 962 (1268)
Q Consensus 887 e~~k~~i~v~~rirp~~~~e~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~fd~vf~~~~~q~~v~~~~-~~lv~~~~ 962 (1268)
...+++|+|++|+||+.+.|...+...++..++ ..++.. ..+.|.||+||+++++|++||+.+ +|+|++++
T Consensus 7 ~~~~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~~~~~~i~~-----~~~~f~FD~Vf~~~~~Q~~Vy~~~~~plv~~~l 81 (365)
T 2y65_A 7 IPAEDSIKVVCRFRPLNDSEEKAGSKFVVKFPNNVEENCISI-----AGKVYLFDKVFKPNASQEKVYNEAAKSIVTDVL 81 (365)
T ss_dssp -CCEEECEEEEEECCCCHHHHHTTCCBCEECCSSSTTCEEEE-----TTEEEECSEEECTTCCHHHHHHHHTHHHHHHHH
T ss_pred CCCCCCEEEEEECCCCCHHHHCCCCCEEEEECCCCCCCEEEE-----CCEEEECCEEECCCCCHHHHHHHHHHHHHHHHH
T ss_conf 789999599999496994673159925999479987767998-----998986746964789989999986303779986
Q ss_pred CCCCEEEEEECCCCCCCCCCCCCCCC---CCCCCHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCC
Q ss_conf 56416798421347875421245899---999707899999999873389629999999434314620247898764465
Q 000820 963 DGYNVCIFAYGQTGSGKTFTIYGSEC---NPGITPRAISELFRILKKENNKFSFSLKAYMVELYQDTLVDLLLPRNEKRL 1039 (1268)
Q Consensus 963 ~G~n~~i~ayG~tgsGKT~tl~G~~~---~~Gii~r~~~~lf~~~~~~~~~~~~~v~~s~~eiy~e~v~DLL~~~~~~~~ 1039 (1268)
+|||+||||||||||||||||+|+.. ++|||||++++||..+........|.|++||+|||||+|+|||.+.. .
T Consensus 82 ~G~n~tifAYGqTGSGKTyTm~G~~~~~~~~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~---~ 158 (365)
T 2y65_A 82 AGYNGTIFAYGQTSSGKTHTMEGVIGDSVKQGIIPRIVNDIFNHIYAMEVNLEFHIKVSYYEIYMDKIRDLLDVSK---V 158 (365)
T ss_dssp TTCCEEEEEECSTTSSHHHHHTBSTTCTTTBCHHHHHHHHHHHHHHHCCSCEEEEEEEEEEEEETTEEEETTCTTC---C
T ss_pred CCCCEEEEEECCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCEEEECCCCCC---C
T ss_conf 7982489834589999964886688875557737799999999998336895399999999998772126225876---7
Q ss_pred CEEEEECCCCCEEECCCEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCEEEEEEEEEE
Q ss_conf 23798589995773593899927987999999810025443456788888985338999999840587726678999996
Q 000820 1040 KLEIKKDSKGMVLVENVTVVPISTFEEIKSIIQRGSDQRHTSGTQMNEESSRSHLILSIVIESTNLQTQSVARGKLSFVD 1119 (1268)
Q Consensus 1040 ~~~i~~~~~~~~~~~~~~~~~v~s~~~~~~~l~~~~~~r~~~~t~~n~~ssrsH~i~~i~i~~~~~~~~~~~~s~l~~vD 1119 (1268)
.+.+++++.++++|.|++++.|.|+++++.++..|..+|++++|.+|..|||||+||+|.+++.+........|+|+|||
T Consensus 159 ~l~i~e~~~~~~~v~gl~~~~V~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~~~skL~lVD 238 (365)
T 2y65_A 159 NLSVHEDKNRVPYVKGATERFVSSPEDVFEVIEEGKSNRHIAVTNMNEHSSRSHSVFLINVKQENLENQKKLSGKLYLVD 238 (365)
T ss_dssp SBCEEECSSSCEEETTCCCEEECSHHHHHHHHHHHHHHHTTTCSCHHHHHHTSEEEEEEEEEEEETTTCCEEEEEEEEEE
T ss_pred CCEEEECCCCCEEECCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEEEEEEE
T ss_conf 72378879998784278899658799999999999864665235688878876399999999970588878689999997
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHH
Q ss_conf 6899654577992235999999749799999999996079-999988787422223456788853139998289988889
Q 000820 1120 LAGSERVKKSGSSGNQLKEAQSINKSLSALGDVISALSSG-SQHIPYRNHKLTMLMSDSLGGNAKTLMFVNVSPAESNLE 1198 (1268)
Q Consensus 1120 Lagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~al~~~-~~~ipyr~skLT~lL~~~lgg~~~~~~i~~isp~~~~~~ 1198 (1268)
||||||..++++.|.+++|+.+||+||++|++||.+|+.+ ..||||||||||+||||+|||||+|+||+||||+..+++
T Consensus 239 LAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~~hvPyRdSkLT~lLqdsLgGnskt~mI~~isP~~~~~~ 318 (365)
T 2y65_A 239 LAGSEKVSKTGAEGTVLDEAKNINKSLSALGNVISALADGNKTHIPYRDSKLTRILQESLGGNARTTIVICCSPASFNES 318 (365)
T ss_dssp CCCCCC----------------CCHHHHHHHHHHHHHHHCCCSCCCGGGCHHHHHTGGGTTSSSEEEEEEEECCBGGGHH
T ss_pred CCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCHH
T ss_conf 99988201218952247899888888999998999985278887866357888987761389963799998467527889
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCHH
Q ss_conf 99999999998511535777778969
Q 000820 1199 ESYNSLTYASRVRSIVNDPNKNVSSK 1224 (1268)
Q Consensus 1199 etl~tL~~a~r~~~i~~~~~~~~~~~ 1224 (1268)
||++||+||+|||.|+|.|.+|....
T Consensus 319 ETl~TL~fA~rak~I~n~~~~n~~~~ 344 (365)
T 2y65_A 319 ETKSTLDFGRRAKTVKNVVCVNEELT 344 (365)
T ss_dssp HHHHHHHHHHHHTTCEEECCCEEECC
T ss_pred HHHHHHHHHHHHHCCCCCCEECCCCC
T ss_conf 99999999999721567541178899
No 9
>2vvg_A Kinesin-2; motor protein, nucleotide-binding, microtubule, ATP-binding; HET: ADP; 1.60A {Giardia intestinalis}
Probab=1.00 E-value=1 Score=651.67 Aligned_cols=332 Identities=38% Similarity=0.637 Sum_probs=302.0
Q ss_pred CCCCEEEECCCCCCCCCCCCCCCEEEEE-CCC--CEEECCC-------CCCCCEEEEECCCCCCCCCHHHHHHC-HHHHH
Q ss_conf 3553041001599832322378169970-797--2232247-------89981136704103898884558730-79999
Q 000820 890 KGKIRVYCRLRPLNEKEDAEKERYVLTS-LDE--FTVEHPW-------KDDKVKQHMYDQVFDGYATQEDVFED-TRYLV 958 (1268)
Q Consensus 890 k~~i~v~~rirp~~~~e~~~~~~~~~~~-~~~--~~~~~~~-------~~~~~~~~~fd~vf~~~~~q~~v~~~-~~~lv 958 (1268)
.++|+|++|+||+.+.|...+...++.. .+. +.+..+. .....+.|.||+||+++++|++||+. ++|+|
T Consensus 3 ~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~~~~v~v~~~~~~~~~~~~~~~~~~f~FD~Vf~~~~~Q~~Vy~~~~~plv 82 (350)
T 2vvg_A 3 SDNIKVIVRCRPLNARETRENALNIIRMDEASAQVIVDPPEQEKSATQAKKVPRTFTFDAVYDQTSCNYGIFQASFKPLI 82 (350)
T ss_dssp -CBCEEEEEECCCCHHHHHTTCCBCEEEEGGGTEEEECC--------------EEEECSEEECTTCCHHHHHHHTTHHHH
T ss_pred CCCEEEEEEECCCCHHHHCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCEEEECCEEECCCCCHHHHHHHHHHHHH
T ss_conf 99869999909799133204995389984999889996045544334457785276678897997610689987899999
Q ss_pred HHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCC
Q ss_conf 99755641679842134787542124589999970789999999987338962999999943431462024789876446
Q 000820 959 QSAVDGYNVCIFAYGQTGSGKTFTIYGSECNPGITPRAISELFRILKKENNKFSFSLKAYMVELYQDTLVDLLLPRNEKR 1038 (1268)
Q Consensus 959 ~~~~~G~n~~i~ayG~tgsGKT~tl~G~~~~~Gii~r~~~~lf~~~~~~~~~~~~~v~~s~~eiy~e~v~DLL~~~~~~~ 1038 (1268)
+++++|||+||||||||||||||||+|+..++|||||++++||..+........|.|++||+|||||+|+|||.+ .
T Consensus 83 ~~~l~G~n~tifAYGqTGSGKTyTm~G~~~~~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~i~DLL~~----~ 158 (350)
T 2vvg_A 83 DAVLEGFNSTIFAYGQTGAGKTWTMGGNKEEPGAIPNSFKHLFDAINSSSSNQNFLVIGSYLELYNEEIRDLIKN----N 158 (350)
T ss_dssp HHHHTTCCEEEEEECSTTSSHHHHHTBCSSSBCHHHHHHHHHHHHHHTCCTTEEEEEEEEEEEEETTEEEETTTT----E
T ss_pred HHHHCCCCEEEEEECCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCEEEECCCC----C
T ss_conf 998578852688646899999878535876675588999999999986536875799999999928788885567----7
Q ss_pred CCEEEEECCCCCEEECCCEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCC--CCEEEEEEE
Q ss_conf 523798589995773593899927987999999810025443456788888985338999999840587--726678999
Q 000820 1039 LKLEIKKDSKGMVLVENVTVVPISTFEEIKSIIQRGSDQRHTSGTQMNEESSRSHLILSIVIESTNLQT--QSVARGKLS 1116 (1268)
Q Consensus 1039 ~~~~i~~~~~~~~~~~~~~~~~v~s~~~~~~~l~~~~~~r~~~~t~~n~~ssrsH~i~~i~i~~~~~~~--~~~~~s~l~ 1116 (1268)
..+.|++++.+++++.|++++.|.++++++.++..|..+|++++|.+|..|||||+||+|++++.+... .....|+|+
T Consensus 159 ~~l~i~e~~~~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~~~~~skl~ 238 (350)
T 2vvg_A 159 TKLPLKEDKTRGIYVDGLSMHRVTTAAELSALMDKGFANRHVAATQMNDTSSRSHSIFMVRIECSEVIENKEVIRVGKLN 238 (350)
T ss_dssp EEECEEEETTTEEEETTCCCEEESSHHHHHHHHHHHHHHC----------CTTCEEEEEEEEEEEEC----CEEEEEEEE
T ss_pred CCCEEEECCCCCEEECCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCEEEEEEE
T ss_conf 68425674899888158779974999999999999984146001457888876529999999995046787617889999
Q ss_pred EEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCC
Q ss_conf 99668996545779922359999997497999999999960799999887874222234567888531399982899888
Q 000820 1117 FVDLAGSERVKKSGSSGNQLKEAQSINKSLSALGDVISALSSGSQHIPYRNHKLTMLMSDSLGGNAKTLMFVNVSPAESN 1196 (1268)
Q Consensus 1117 ~vDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~al~~~~~~ipyr~skLT~lL~~~lgg~~~~~~i~~isp~~~~ 1196 (1268)
|||||||||..++++.|.+++|+.+||+||++|++||.+|+.+..||||||||||+||||+|||||+|+||+||||+..+
T Consensus 239 lVDLAGSEr~~~t~~~g~rl~E~~~IN~SL~aLg~vI~aL~~~~~hvPyRdSkLT~lLqdsLgGnskt~mI~~isP~~~~ 318 (350)
T 2vvg_A 239 LVDLAGSERQSKTGATGETLVEGAKINLSLSALGLVISKLVEGATHIPYRDSKLTRLLQDSLGGNSKTLMCANISPASTN 318 (350)
T ss_dssp EEECCCCCC---------------CTTHHHHHHHHHHHHHHHTCSSCCGGGCHHHHHTTTTTTSSSEEEEEEEECCBGGG
T ss_pred EEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCC
T ss_conf 99689887554456507788999887589999999999997389988764558889989860899628999996884001
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCHHH
Q ss_conf 89999999999985115357777789699
Q 000820 1197 LEESYNSLTYASRVRSIVNDPNKNVSSKE 1225 (1268)
Q Consensus 1197 ~~etl~tL~~a~r~~~i~~~~~~~~~~~~ 1225 (1268)
++||++||+||+|+|.|+|+|.+|.++++
T Consensus 319 ~~ETl~TL~fA~rak~i~n~~~~n~~~~~ 347 (350)
T 2vvg_A 319 YDETMSTLRYADRAKQIKNKPRINEDPKD 347 (350)
T ss_dssp HHHHHHHHHHHHHHTTCBCCCCCCBSCTT
T ss_pred HHHHHHHHHHHHHHHHCCCCCEECCCCHH
T ss_conf 89999999999998544566612578201
No 10
>1goj_A Kinesin, kinesin heavy chain; motor protein, ATPase; HET: ADP; 2.3A {Neurospora crassa} SCOP: c.37.1.9
Probab=1.00 E-value=1 Score=649.56 Aligned_cols=332 Identities=36% Similarity=0.600 Sum_probs=306.1
Q ss_pred CCCCCCEEEECCCCCCCCCCCCCCCEEEEECCCCEEECCCCCCCCEEEEECCCCCCCCCHHHHHHC-HHHHHHHHHCCCC
Q ss_conf 123553041001599832322378169970797223224789981136704103898884558730-7999999755641
Q 000820 888 DMKGKIRVYCRLRPLNEKEDAEKERYVLTSLDEFTVEHPWKDDKVKQHMYDQVFDGYATQEDVFED-TRYLVQSAVDGYN 966 (1268)
Q Consensus 888 ~~k~~i~v~~rirp~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~vf~~~~~q~~v~~~-~~~lv~~~~~G~n 966 (1268)
...++|+|++|+||+.+.|...+...++...+..++.... ....+.|.||+||+++++|++||+. ++|+|+++++|||
T Consensus 3 ~~~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~~~~~~~~-~~~~~~f~FD~Vf~~~~~Q~~Vy~~~~~plv~~~l~G~n 81 (355)
T 1goj_A 3 SSANSIKVVARFRPQNRVEIESGGQPIVTFQGPDTCTVDS-KEAQGSFTFDRVFDMSCKQSDIFDFSIKPTVDDILNGYN 81 (355)
T ss_dssp CSSCBCEEEEEECCCCHHHHTTTCCBCEEECSTTEEEECS-TTCCEEEECSEEECTTCCHHHHHHHHTHHHHHHHTTTCC
T ss_pred CCCCCEEEEEECCCCCHHHHHCCCCEEEEECCCCEEEECC-CCCCCEEEECEEECCCCCCHHHHHHHHHHHHHHHHCCCC
T ss_conf 8999869999889999578506996399986998499726-897527761959899876279999999999999857982
Q ss_pred EEEEEECCCCCCCCCCCCCC----CCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCEE
Q ss_conf 67984213478754212458----99999707899999999873389629999999434314620247898764465237
Q 000820 967 VCIFAYGQTGSGKTFTIYGS----ECNPGITPRAISELFRILKKENNKFSFSLKAYMVELYQDTLVDLLLPRNEKRLKLE 1042 (1268)
Q Consensus 967 ~~i~ayG~tgsGKT~tl~G~----~~~~Gii~r~~~~lf~~~~~~~~~~~~~v~~s~~eiy~e~v~DLL~~~~~~~~~~~ 1042 (1268)
+||||||||||||||||+|+ ..++|||||++++||..+........|.|++||+|||||+|+|||.|.. ..+.
T Consensus 82 ~tifAYGqTGSGKTyTm~G~~~~~~~~~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~---~~l~ 158 (355)
T 1goj_A 82 GTVFAYGQTGAGKSYTMMGTSIDDPDGRGVIPRIVEQIFTSILSSAANIEYTVRVSYMEIYMERIRDLLAPQN---DNLP 158 (355)
T ss_dssp EEEEEECSTTSSHHHHHTBSCTTSTTTBCHHHHHHHHHHHHHHTSCTTEEEEEEEEEEEEETTEEEETTSTTC---CSCC
T ss_pred CEEEEECCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCEEEECCCCCC---CCCE
T ss_conf 2288889999986067515788776668706799999999987145685089999999997897788445766---7852
Q ss_pred EEECCCCCEEECCCEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCEEEEEEEEEECCC
Q ss_conf 98589995773593899927987999999810025443456788888985338999999840587726678999996689
Q 000820 1043 IKKDSKGMVLVENVTVVPISTFEEIKSIIQRGSDQRHTSGTQMNEESSRSHLILSIVIESTNLQTQSVARGKLSFVDLAG 1122 (1268)
Q Consensus 1043 i~~~~~~~~~~~~~~~~~v~s~~~~~~~l~~~~~~r~~~~t~~n~~ssrsH~i~~i~i~~~~~~~~~~~~s~l~~vDLag 1122 (1268)
|++++.+++++.|++++.|.++++++.++..|..+|++++|.+|..|||||+||+|.+++.+...+....|+|+||||||
T Consensus 159 i~e~~~~g~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~~~skL~lVDLAG 238 (355)
T 1goj_A 159 VHEEKNRGVYVKGLLEIYVSSVQEVYEVMRRGGNARAVAATNMNQESSRSHSIFVITITQKNVETGSAKSGQLFLVDLAG 238 (355)
T ss_dssp EEEETTTEEEETTCCCEECCSHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEEEEEEEEEETTTTEEEEEEEEEEECCC
T ss_pred EEECCCCCEEECCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCEEEEEEEEEECCC
T ss_conf 68858999960687799579999999999999752472334478987776099999999960688955665799998988
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHH
Q ss_conf 9654577992235999999749799999999996079-999988787422223456788853139998289988889999
Q 000820 1123 SERVKKSGSSGNQLKEAQSINKSLSALGDVISALSSG-SQHIPYRNHKLTMLMSDSLGGNAKTLMFVNVSPAESNLEESY 1201 (1268)
Q Consensus 1123 se~~~~~~~~~~~~~e~~~in~sl~~L~~vi~al~~~-~~~ipyr~skLT~lL~~~lgg~~~~~~i~~isp~~~~~~etl 1201 (1268)
|||..+++..|.+++|+.+||+||++|++||.+|+.+ ..||||||||||+||+|+||||++|+||+||||+..+++||+
T Consensus 239 SEr~~~t~~~g~rl~E~~~IN~SL~aLg~vI~aL~~~~~~hvPyRdSkLT~lLqdsLgGns~t~mI~~isP~~~~~~ETl 318 (355)
T 1goj_A 239 SEKVGKTGASGQTLEEAKKINKSLSALGMVINALTDGKSSHVPYRDSKLTRILQESLGGNSRTTLIINCSPSSYNDAETL 318 (355)
T ss_dssp CSCCTTSSSCCCCTTTTGGGTSHHHHHHHHHHHHHHCSCSCCCGGGCHHHHHTGGGTTSSCEEEEEEEECCBGGGHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHH
T ss_conf 77443246602667888765167999999999986489998877557999999997289976899999796302699999
Q ss_pred HHHHHHHHHCCCCCCCCCCCCH
Q ss_conf 9999999851153577777896
Q 000820 1202 NSLTYASRVRSIVNDPNKNVSS 1223 (1268)
Q Consensus 1202 ~tL~~a~r~~~i~~~~~~~~~~ 1223 (1268)
+||+||+|+|.|+|+|.+|...
T Consensus 319 ~TL~fA~rak~I~n~~~vn~~~ 340 (355)
T 1goj_A 319 STLRFGMRAKSIKNKAKVNAEL 340 (355)
T ss_dssp HHHHHHHHHHTCBCCCCCCSSS
T ss_pred HHHHHHHHHHHCCCCCEECCCC
T ss_conf 9999999972366775567879
Done!