Query 000821
Match_columns 1267
No_of_seqs 264 out of 1293
Neff 5.3
Searched_HMMs 29240
Date Tue Mar 26 16:51:55 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/000821.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_591-595//hhsearch_pdb/000821hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ols_A Phosphoenolpyruvate syn 1.0 1 1 437.3 26.3 291 949-1266 2-336 (794)
2 1vbg_A Pyruvate,orthophosphate 1.0 1 1 359.9 14.1 244 950-1266 3-342 (876)
3 1kbl_A PPDK, pyruvate phosphat 1.0 1 1 350.8 11.7 242 951-1266 2-338 (873)
4 1h6z_A Pyruvate phosphate diki 1.0 1 1 345.3 10.5 267 949-1266 3-367 (913)
5 2x0s_A Pyruvate phosphate diki 1.0 1 1 333.6 8.8 268 949-1266 3-367 (913)
6 2ols_A Phosphoenolpyruvate syn 1.0 1 1 49.2 2.4 100 814-921 362-467 (794)
7 2e28_A Pyruvate kinase, PK; al 1.0 1 1 49.2 4.9 98 816-919 482-581 (587)
8 1vbg_A Pyruvate,orthophosphate 1.0 1 1 47.6 3.9 104 813-921 396-512 (876)
9 1kbl_A PPDK, pyruvate phosphat 1.0 1 1 47.5 3.4 105 812-921 391-508 (873)
10 3t05_A Pyruvate kinase, PK; te 1.0 1 1 47.2 8.9 97 816-919 501-599 (606)
No 1
>2ols_A Phosphoenolpyruvate synthase; MC structural genomics, PSI-2, protein structure initiative, M center for structural genomics, transferase; 2.40A {Neisseria meningitidis}
Probab=1.00 E-value=1 Score=437.32 Aligned_cols=291 Identities=24% Similarity=0.363 Sum_probs=240.6
Q ss_pred CCCEEEECCCCCC---CCCCHHHHHHHHHHHHCC-CCCCCCCCEEECHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHH
Q ss_conf 7761374799798---755644186998543089-964489950409789999998125204999999998540899947
Q 000821 949 RGKYAVSVEDFTP---DMVGAKSCNIKFLRERVP-SWIKIPTSVAIPFGAFETVLSENINKDIANKISRLYKFINGGDLS 1024 (1267)
Q Consensus 949 ~~~~vi~l~e~~~---~~vGgKAanLa~L~~~lp-~g~~VP~GfvIPfgafe~fL~~~~n~~l~~~I~~l~a~l~~~d~~ 1024 (1267)
+++|++++++.+. ..+|||++||++|.+.++ .|++||+||+||+++|++|++.+ ++++.|....+.++..+..
T Consensus 2 ~~~~v~~~~~~~~~~~~~vGGK~anL~em~~~L~~~GlpVP~GF~Itt~a~~~fl~~~---~l~~~i~~~l~~l~~~~~~ 78 (794)
T 2ols_A 2 ADNYVIWFENLRMTDVERVGGKNASLGEMISQLTEKGVRVPGGFATTAEAYRAFLAHN---GLSERISAALAKLDVEDVA 78 (794)
T ss_dssp --CCEEEGGGCCGGGHHHHHHHHHHHHHHHHHHGGGTCCCCCEEEECHHHHHHHHTGG---GHHHHHHHHHHSCCTTSHH
T ss_pred CCCEEEECCCCCHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHC---CHHHHHHHHHHHHCCCCHH
T ss_conf 9877987776880211138788998999998776479989998998799999999838---8489999998760556789
Q ss_pred HH----HHHHHHHHCCCCCHHHHHHHHHHHH----------------HCC-------CCCCCCC-------CHHHHHHHH
Q ss_conf 89----9999999928999999999999988----------------019-------9999972-------299999999
Q 000821 1025 KL----QEIQEAVLQMSAPLSLIYELKNKMR----------------SSG-------MPWPGDE-------GWNLAWRSI 1070 (1267)
Q Consensus 1025 ~L----~~IR~~Il~~~lP~el~~eL~~a~R----------------SSg-------~s~aG~~-------g~e~l~~AI 1070 (1267)
.| .++|++|+++++|+++.++|..+++ ||+ .+|||++ |.++++.||
T Consensus 79 ~l~~~~~~ir~~I~~~~~p~~l~~~i~~a~~~l~~~~g~~~~~vaVRSSa~~EDl~~~sfAG~~~t~l~v~g~~~l~~Ai 158 (794)
T 2ols_A 79 ELARVGKEIRQWILDTPFPEQLDAEIEAAWNKMVADAGGADISVAVRSSATAEDLPDASFAGQQETFLNINGLDNVKEAM 158 (794)
T ss_dssp HHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTSSCCCCEEEEEEECC-------CCSCSCEEEEECSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
T ss_conf 99999999999998489998999999999998742446567428981578733546654444566631689999999999
Q ss_pred HHHHHCCCCHHHHHHHHHCCCCCCCCCEEEEEEEEECCC--EEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCC
Q ss_conf 999933898589999998199986662077998510676--329999369998998652441344666510135578771
Q 000821 1071 KKVWASKWNERAFISCRKANLNHDNLCMAVLIQETICGD--YAFVIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAM 1148 (1267)
Q Consensus 1071 K~VWASlys~RAi~yRr~~Gi~~~~v~MAVLVQemV~ad--~SGVlfT~nP~tgd~~~i~Ieav~GLGEsLVsG~~G~p~ 1148 (1267)
|+||||+||+||+.||+.+|++++++.|||+||+||+++ .|||+||+||.+|+.+.++|+++|||||+||+|.+ +|+
T Consensus 159 k~v~aS~~s~RAi~YR~~~gi~~~~~~mAV~VQ~MV~~~~s~sGV~FT~dP~tG~~~~~~I~a~~GlGE~vV~G~~-tpd 237 (794)
T 2ols_A 159 HHVFASLYNDRAISYRVHKGFEHDIVALSAGVQRMVRSDSGASGVMFTLDTESGYDQVVFVTSSYGLGENVVQGAV-NPD 237 (794)
T ss_dssp HHHHHHTTCHHHHHHHHHHCC--CCCCEEEEEEECCCTTSSEEEEEESSCTTTCCCSEEEEEEEESCTHHHHHTSS-CCE
T ss_pred HHHHHHCCCHHHHHHHHHCCCCHHHHCCEEEEEECCCCCCEEEEEEEECCCCCCCCCEEEEEECCCCCCEEECCCC-CCC
T ss_conf 9999861788899999975999177484699998116875258999967998898766999953689842211775-770
Q ss_pred EEEEECCCCC--CCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf 5999057898--98301356531245688507851599975200014897022351697421012358998779611014
Q 000821 1149 SFVTKKNNLK--SPIVTCYPSKLIGLYGKPSIIFRSDSNGEDLEKYAGAGLYDSVIMNDPEKVVLDYSRDPMVGDKSFQT 1226 (1267)
Q Consensus 1149 ~f~v~K~~~~--~~~vl~~~sk~ig~~~~~~~i~rsdsngedLe~~agaGl~~svp~~~~~~~~vdys~~plLtD~~~r~ 1226 (1267)
.|+++|.++. ...+ .++.++.+ ...+++.. +++ .+|....++++... ...++|+|++
T Consensus 238 ~~~v~kp~l~~~~~~i---~~~~~~~k-~~~~~~~~--~~~------~g~~~~~~~~p~~~------~~~~~L~d~~--- 296 (794)
T 2ols_A 238 EFYVFKPTLKAGKPAI---LRKTMGSK-HIKMIFTD--KAE------AGKSVTNVDVPEED------RNRFSITDEE--- 296 (794)
T ss_dssp EEEEEHHHHHTTSCCE---EEEECCCC-CEEEEECS--CCS------SSTTEEEEECCHHH------HTSCSSCHHH---
T ss_pred EEEEECCCCCCCCCCE---EEEECCCC-CEEEEECC--CCC------CCCEEEEEECCHHH------HCCCCCCHHH---
T ss_conf 8998434334677630---36522665-14687335--666------79704998689899------4587789999---
Q ss_pred HHHHHHHHHHHHHHHHCCCCEEEEEEEECC--EEEEEEECCC
Q ss_conf 999999999999998509973599999889--6999961157
Q 000821 1227 SVFSKIAETGKIIESLYGYPQDIEGVLKDG--LIYVVQARPQ 1266 (1267)
Q Consensus 1227 ~ll~~La~la~~IE~~fG~PQDIEwai~~g--~LyILQsRPq 1266 (1267)
+.+|++++..||++||.||||||+++++ +|||||+||+
T Consensus 297 --~~~L~~~~~~lE~~yg~pqDIEwai~~~~g~L~iLQaRP~ 336 (794)
T 2ols_A 297 --ITELAHYALTIEKHYGRPMDIEWGRDGLDGKLYILQARPE 336 (794)
T ss_dssp --HHHHHHHHHHHHHHHTSCEEEEEEECTTTCCEEEEEEEEC
T ss_pred --HHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEEEEEECCC
T ss_conf --9999999999998729976899999889885999984376
No 2
>1vbg_A Pyruvate,orthophosphate dikinase; transferase, maize, riken structural genomics/proteomics INI RSGI, structural genomics; 2.30A {Zea mays} SCOP: c.1.12.2 c.8.1.1 d.142.1.5 PDB: 1vbh_A*
Probab=1.00 E-value=1 Score=359.89 Aligned_cols=244 Identities=17% Similarity=0.197 Sum_probs=190.8
Q ss_pred CCEEEEC----CCCC---CCCCCHHHHHHHHHHHHCCCCCCCCCCEEECHHHHHHHHHHC--CCHHHHHHHHHHHHHHC-
Q ss_conf 7613747----9979---875564418699854308996448995040978999999812--52049999999985408-
Q 000821 950 GKYAVSV----EDFT---PDMVGAKSCNIKFLRERVPSWIKIPTSVAIPFGAFETVLSEN--INKDIANKISRLYKFIN- 1019 (1267)
Q Consensus 950 ~~~vi~l----~e~~---~~~vGgKAanLa~L~~~lp~g~~VP~GfvIPfgafe~fL~~~--~n~~l~~~I~~l~a~l~- 1019 (1267)
.+||+++ ++.+ ...+|||++||++|.+ .|++||+||+||+++|++|++.+ ...+++++|....+.++
T Consensus 3 ~~~v~~f~~~~~~~~~~~~~~vGGKganL~em~~---~glpVP~GF~Itt~a~~~~~~~~~~~~~~l~~~i~~~l~~le~ 79 (876)
T 1vbg_A 3 KKRVFHFGKGKSEGNKTMKELLGGKGANLAEMAS---IGLSVPPGFTVSTEACQQYQDAGCALPAGLWAEIVDGLQWVEE 79 (876)
T ss_dssp CCSEEEEETTEESSCTTCTTTTHHHHHHHHHHHH---TTCCCCCEEEECHHHHHHHHHTTSCCCTTHHHHHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHH---CCCCCCCEEEECHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
T ss_conf 8689988766655672230018589999999997---8999999389779999999986100518899999999999987
Q ss_pred -----CCCHH-------------HHHHHHHHHHCCCCCHHHHHHHHHH---------HH---------------------
Q ss_conf -----99947-------------8999999999289999999999999---------88---------------------
Q 000821 1020 -----GGDLS-------------KLQEIQEAVLQMSAPLSLIYELKNK---------MR--------------------- 1051 (1267)
Q Consensus 1020 -----~~d~~-------------~L~~IR~~Il~~~lP~el~~eL~~a---------~R--------------------- 1051 (1267)
.++.. .+..++++|+++.+|++++++|..+ ||
T Consensus 80 ~~~~~~gd~~~plllsvrs~a~~smpgm~~tIln~~lpd~~~~~l~~~~~~~fA~d~yrr~~q~~~~~~~~vr~~~f~~~ 159 (876)
T 1vbg_A 80 YMGATLGDPQRPLLLSVRSGAAVSMPGMMDTVLNLGLNDEVAAGLAAKSGERFAYDSFRRFLDMFGNVVMDIPRSLFEEK 159 (876)
T ss_dssp HHTCBTTCSSSBCCEEEECCCSSCCTTCCCCEEEETCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHTSCCCHHHHHHH
T ss_pred HHCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEECCHHHHHHH
T ss_conf 63513488766430000005654650689999817999999999997535215899999998631661350472657999
Q ss_pred -------------HCC---------CCCCCCC-----------CHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCE
Q ss_conf -------------019---------9999972-----------2999999999999338985899999981999866620
Q 000821 1052 -------------SSG---------MPWPGDE-----------GWNLAWRSIKKVWASKWNERAFISCRKANLNHDNLCM 1098 (1267)
Q Consensus 1052 -------------SSg---------~s~aG~~-----------g~e~l~~AIK~VWASlys~RAi~yRr~~Gi~~~~v~M 1098 (1267)
||. .+|+|.| .+++++.||+.||||+||+||+.||+.+|++++ ..|
T Consensus 160 ~~~~~~~~~v~~~ss~taEDl~~~~~sf~~~y~~~~g~~fp~d~~~qL~~Ai~~v~aS~~~~RAi~YR~~~gi~~~-~~~ 238 (876)
T 1vbg_A 160 LEHMKESKGLKNDTDLTASDLKELVGQYKEVYLSAKGEPFPSDPKKQLELAVLAVFNSWESPRAKKYRSINQITGL-RGT 238 (876)
T ss_dssp HHHHHHHHTCSSGGGCCHHHHHHHHHHHHHHHHHHHSSCCCCCHHHHHHHHHHHHHHHTTCHHHHHHHHTTTCCCC-CCC
T ss_pred HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCH-HCC
T ss_conf 9998775184446668877899999999999988619999877599999999999955598789999996499800-075
Q ss_pred EEEEEEEECCC-----EEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 77998510676-----3299993699989986524413446665101355787715999057898983013565312456
Q 000821 1099 AVLIQETICGD-----YAFVIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAMSFVTKKNNLKSPIVTCYPSKLIGLY 1173 (1267)
Q Consensus 1099 AVLVQemV~ad-----~SGVlfT~nP~tgd~~~i~Ieav~GLGEsLVsG~~G~p~~f~v~K~~~~~~~vl~~~sk~ig~~ 1173 (1267)
||+||+||.++ .|||+||+||.+|+++.+-..++.|+||.||+|.+ +|+.|.+ +
T Consensus 239 AV~VQ~MV~g~~g~~s~sGV~FT~nP~tG~~~~~g~~li~a~GE~VVsG~~-tPd~~~~----------l---------- 297 (876)
T 1vbg_A 239 AVNVQCMVFGNMGNTSGTGVLFTRNPNTGEKKLYGEFLVNAQGEDVVAGIR-TPEDLDA----------M---------- 297 (876)
T ss_dssp CEEEEECCCSCSSTTCEEEEEESSCTTTCCSSCEEEEEESSCHHHHHHTSC-CCEETHH----------H----------
T ss_pred EEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCEEEEEECCCHHHHCCCC-CCCHHHH----------H----------
T ss_conf 589998025788997057999837899998663338998467356535885-8622555----------2----------
Q ss_pred CCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEE
Q ss_conf 88507851599975200014897022351697421012358998779611014999999999999998509973599999
Q 000821 1174 GKPSIIFRSDSNGEDLEKYAGAGLYDSVIMNDPEKVVLDYSRDPMVGDKSFQTSVFSKIAETGKIIESLYGYPQDIEGVL 1253 (1267)
Q Consensus 1174 ~~~~~i~rsdsngedLe~~agaGl~~svp~~~~~~~~vdys~~plLtD~~~r~~ll~~La~la~~IE~~fG~PQDIEwai 1253 (1267)
+ + ..++. +.+|++++..||++||.||||||++
T Consensus 298 ----------------~----------------~-----------~~p~~-----~~~L~~~~~~lE~hy~~pqDIEfti 329 (876)
T 1vbg_A 298 ----------------K----------------N-----------LMPQA-----YDELVENCNILESHYKEMQDIEFTV 329 (876)
T ss_dssp ----------------H----------------H-----------HCHHH-----HHHHHHHHHHHHHHHCSCEEEEEEE
T ss_pred ----------------C----------------C-----------CCHHH-----HHHHHHHHHHHHHHCCCCEEEEEEE
T ss_conf ----------------0----------------2-----------68899-----9999999999999749975889999
Q ss_pred ECCEEEEEEECCC
Q ss_conf 8896999961157
Q 000821 1254 KDGLIYVVQARPQ 1266 (1267)
Q Consensus 1254 ~~g~LyILQsRPq 1266 (1267)
++|+|||||+||+
T Consensus 330 ~~g~L~iLQ~Rp~ 342 (876)
T 1vbg_A 330 QENRLWMLQCRTG 342 (876)
T ss_dssp ETTEEEEEEEEEC
T ss_pred ECCEEEEEEECCC
T ss_conf 8997999983023
No 3
>1kbl_A PPDK, pyruvate phosphate dikinase; transferase, phosphotransferase; 1.94A {Clostridium symbiosum} SCOP: c.1.12.2 c.8.1.1 d.142.1.5 PDB: 1kc7_A* 1dik_A 1ggo_A 1jde_A 2dik_A 2r82_A 2fm4_A
Probab=1.00 E-value=1 Score=350.83 Aligned_cols=242 Identities=20% Similarity=0.312 Sum_probs=187.5
Q ss_pred CEEEECCCCCC---CCCCHHHHHHHHHHHHCCCCCCCCCCEEECHHHHHHHHHHC--CCHHHHHHHHHHHHHHCC-----
Q ss_conf 61374799798---75564418699854308996448995040978999999812--520499999999854089-----
Q 000821 951 KYAVSVEDFTP---DMVGAKSCNIKFLRERVPSWIKIPTSVAIPFGAFETVLSEN--INKDIANKISRLYKFING----- 1020 (1267)
Q Consensus 951 ~~vi~l~e~~~---~~vGgKAanLa~L~~~lp~g~~VP~GfvIPfgafe~fL~~~--~n~~l~~~I~~l~a~l~~----- 1020 (1267)
+||+++++.+. ..+|||++||++|.+ .|++||+||+||+++|++|++.+ ...+++++|....+.++.
T Consensus 2 ~~v~~f~~~~~~~~~~vGGKganL~em~~---~glpVP~GF~ITt~a~~~~~~~~~~~p~~l~~~i~~~l~~le~~~~~~ 78 (873)
T 1kbl_A 2 KWVYKFEEGNASMRNLLGGKGCNLAEMTI---LGMPIPQGFTVTTEACTEYYNSGKQITQEIQDQIFEAITWLEELNGKK 78 (873)
T ss_dssp CCEEEGGGCCGGGHHHHHHHHHHHHHHHH---TTCCCCCEEEECHHHHHHHHTTSSCCCHHHHHHHHHHHHHHHHHHTSC
T ss_pred CEEEECCCCCHHHHHHCCHHHHHHHHHHH---CCCCCCCEEEECHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCC
T ss_conf 84897767881103337199999999996---879999979985999999998552364889999999999999873502
Q ss_pred -CCHH-------------HHHHHHHHHHCCCCCHHHHHHHHH----------HHH-------------------------
Q ss_conf -9947-------------899999999928999999999999----------988-------------------------
Q 000821 1021 -GDLS-------------KLQEIQEAVLQMSAPLSLIYELKN----------KMR------------------------- 1051 (1267)
Q Consensus 1021 -~d~~-------------~L~~IR~~Il~~~lP~el~~eL~~----------a~R------------------------- 1051 (1267)
++.+ .+..++++|+++.+|++++++|.. +||
T Consensus 79 fg~~~~pl~lsvRS~a~~SmpGm~dtiLn~~l~d~~~~~l~~~~g~~~fa~d~yrr~~~~~~~v~~~v~~~~f~~~~~~~ 158 (873)
T 1kbl_A 79 FGDTEDPLLVSVRSGARASMPGMMDTILNLGLNDVAVEGFAKKTGNPRFAYDSYRRFIQMYSDVVMEVPKSHFEKIIDAM 158 (873)
T ss_dssp BTCSSSCBCEEEEEECSSCCTTSSCEEEEETCCTTHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHH
T ss_conf 48878840487742050026427789980899989999999750772579999999984368732640606678899998
Q ss_pred ---------HC----------------------CCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCEEE
Q ss_conf ---------01----------------------99999972299999999999933898589999998199986662077
Q 000821 1052 ---------SS----------------------GMPWPGDEGWNLAWRSIKKVWASKWNERAFISCRKANLNHDNLCMAV 1100 (1267)
Q Consensus 1052 ---------SS----------------------g~s~aG~~g~e~l~~AIK~VWASlys~RAi~yRr~~Gi~~~~v~MAV 1100 (1267)
|+ |.+||. +..++++.|||+||||+||+||+.||+.+|++++ ..|||
T Consensus 159 ~~~~~v~~ds~~taedl~~~~~~~~~~~~~~~~g~~fp~-dp~eqL~~Aik~V~aS~~~~RAi~YR~~~gi~~~-~~~AV 236 (873)
T 1kbl_A 159 KEEKGVHFDTDLTADDLKELAEKFKAVYKEAMNGEEFPQ-EPKDQLMGAVKAVFRSWDNPRAIVYRRMNDIPGD-WGTAV 236 (873)
T ss_dssp HHHTCCCSGGGCCHHHHHHHHHHHHHHHHTTTTTCCCCC-CHHHHHHHHHHHHHHHTTSHHHHHHHHHTTCCGG-GCCEE
T ss_pred HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC-CHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCH-HCCEE
T ss_conf 875175756778878889999999999987505999875-6799999999999845488889999997699810-07468
Q ss_pred EEEEEECCC-----EEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 998510676-----329999369998998652441344666510135578771599905789898301356531245688
Q 000821 1101 LIQETICGD-----YAFVIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAMSFVTKKNNLKSPIVTCYPSKLIGLYGK 1175 (1267)
Q Consensus 1101 LVQemV~ad-----~SGVlfT~nP~tgd~~~i~Ieav~GLGEsLVsG~~G~p~~f~v~K~~~~~~~vl~~~sk~ig~~~~ 1175 (1267)
+||+||.++ .|||+||+||.+|+++.+-...+.|+||.||+|.+ +|+.|.+ +
T Consensus 237 ~VQ~MV~g~~~~~s~sGV~FT~nP~tG~~~~~g~~li~a~GE~VV~G~~-tPd~~~~----------l------------ 293 (873)
T 1kbl_A 237 NVQTMVFGNKGETSGTGVAFTRNPSTGEKGIYGEYLINAQGEDVVAGVR-TPQPITQ----------L------------ 293 (873)
T ss_dssp EEEECCCTTSSTTCEEEEEEEECTTTCCEEEEEEEEESCCHHHHHHTSS-CCEEGGG----------H------------
T ss_pred EEEECCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEECCCCHHHHCCCC-CCHHHHH----------H------------
T ss_conf 9998135789996257999845899998660169996277356652875-8515555----------1------------
Q ss_pred CEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEC
Q ss_conf 50785159997520001489702235169742101235899877961101499999999999999850997359999988
Q 000821 1176 PSIIFRSDSNGEDLEKYAGAGLYDSVIMNDPEKVVLDYSRDPMVGDKSFQTSVFSKIAETGKIIESLYGYPQDIEGVLKD 1255 (1267)
Q Consensus 1176 ~~~i~rsdsngedLe~~agaGl~~svp~~~~~~~~vdys~~plLtD~~~r~~ll~~La~la~~IE~~fG~PQDIEwai~~ 1255 (1267)
+ ...++ .+.+|++++..||++||.||||||++++
T Consensus 294 --------------~---------------------------~~~p~-----~~~~L~~~~~~lE~hy~~pqDIEfti~~ 327 (873)
T 1kbl_A 294 --------------E---------------------------NDMPD-----CYKQFMDLAMKLEKHFRDMQDMEFTIEE 327 (873)
T ss_dssp --------------H---------------------------HHCHH-----HHHHHHHHHHHHHHHHTSCEEEEEEEET
T ss_pred --------------C---------------------------CCCHH-----HHHHHHHHHHHHHHHCCCCEEEEEEEEC
T ss_conf --------------1---------------------------26879-----9999999999999983997698999989
Q ss_pred CEEEEEEECCC
Q ss_conf 96999961157
Q 000821 1256 GLIYVVQARPQ 1266 (1267)
Q Consensus 1256 g~LyILQsRPq 1266 (1267)
|+|||||+||.
T Consensus 328 g~L~iLQtRp~ 338 (873)
T 1kbl_A 328 GKLYFLQTRNG 338 (873)
T ss_dssp TEEEEEEEEEC
T ss_pred CEEEEEEECCC
T ss_conf 97999982331
No 4
>1h6z_A Pyruvate phosphate dikinase; transferase, tropical parasite, trypanosome; 3.00A {Trypanosoma brucei} PDB: 2x0s_A
Probab=1.00 E-value=1 Score=345.34 Aligned_cols=267 Identities=19% Similarity=0.227 Sum_probs=194.3
Q ss_pred CCCEEEECCC----CC---CCCCCHHHHHHHHHHHHCCCCCCCCCCEEECHHHHHHHHHHC-CCHHHHHHHHHHHHHHC-
Q ss_conf 7761374799----79---875564418699854308996448995040978999999812-52049999999985408-
Q 000821 949 RGKYAVSVED----FT---PDMVGAKSCNIKFLRERVPSWIKIPTSVAIPFGAFETVLSEN-INKDIANKISRLYKFIN- 1019 (1267)
Q Consensus 949 ~~~~vi~l~e----~~---~~~vGgKAanLa~L~~~lp~g~~VP~GfvIPfgafe~fL~~~-~n~~l~~~I~~l~a~l~- 1019 (1267)
+.+||+++++ .+ .+++|||++||++|.+ .|+|||+||+||+.+|..|++.+ ...+++++|...++.++
T Consensus 3 ~~k~v~~f~~~~~~~~~~~~~llGgKganL~em~~---lglpVPpGF~Itteac~~~~~~~~~~~~l~~~i~~~l~~le~ 79 (913)
T 1h6z_A 3 AKKWVYYFGGGNADGNKNMKELLGGKGANLAEMVN---LGIPVPPGFTITTEACKTYQETETIPQEVADQVRENVSRVEK 79 (913)
T ss_dssp CCCCEEEECSSSCSCCTTCHHHHHHHHHHHHHHHH---TTCCCCCEEEECHHHHTTTTTSSCCCHHHHHHHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCCHHHHHHCCHHHHHHHHHHH---CCCCCCCCEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
T ss_conf 77879988887666884457643767655999997---789999918962999999997389958899999999999998
Q ss_pred -----CCCH-------------HHHHHHHHHHHCCCCCHHHHHH-HH----------HHHHH----C-----CCC---C-
Q ss_conf -----9994-------------7899999999928999999999-99----------99880----1-----999---9-
Q 000821 1020 -----GGDL-------------SKLQEIQEAVLQMSAPLSLIYE-LK----------NKMRS----S-----GMP---W- 1057 (1267)
Q Consensus 1020 -----~~d~-------------~~L~~IR~~Il~~~lP~el~~e-L~----------~a~RS----S-----g~s---~- 1057 (1267)
.++. ..+..+++.|+++.+++++++. |. .+||. . +.+ |
T Consensus 80 ~~g~~fg~~~~PLLvsvrsga~~smpGmmdtilnlGlnd~~~~~~la~~~g~~~fa~d~Yrrfiq~~~~vv~~v~~~~fe 159 (913)
T 1h6z_A 80 EMGAKFGDPANPLLFSVRSGAAASMPGMMDTVLNLGLNKVTVDAWVRRAPRLERFVYDSYRRFITMYADIVMQVGREDFE 159 (913)
T ss_dssp HHCCBTTCTTSBCCEEEEESCTTC-----CCCCSBSCCHHHHHHHGGGCGGGHHHHHHHHHHHHHHHHHHHHCCCSTTTS
T ss_pred HHCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHHCCCCHHHHH
T ss_conf 72855478777652355216655540278998715999799999998740771679999999998734464388778899
Q ss_pred -------------------------------------CC----CCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCC
Q ss_conf -------------------------------------99----7229999999999993389858999999819998666
Q 000821 1058 -------------------------------------PG----DEGWNLAWRSIKKVWASKWNERAFISCRKANLNHDNL 1096 (1267)
Q Consensus 1058 -------------------------------------aG----~~g~e~l~~AIK~VWASlys~RAi~yRr~~Gi~~~~v 1096 (1267)
.| ++-.++++.||+.||||+||+||+.||+.+|++++ +
T Consensus 160 ~~~~~~k~~~g~~~d~~~~a~dl~~~~~~yk~~~~~~~g~~fp~dp~eqL~~AI~~v~aS~~s~RAi~YR~~~gi~~~-~ 238 (913)
T 1h6z_A 160 EALSRMKERRGTKFDTDLTASDLKELCDGYLELFELKTGCSFPQDPVMQLFAAIKAVFRSWGNPRATIYRRMNNITGL-L 238 (913)
T ss_dssp TTTHHHHHHHSCSCGGGCCHHHHHHHHHTTHHHHHHHSSSCCCCCHHHHHHHHHHHHHHTTTCTTTTTHHHHSCCCSC-C
T ss_pred HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHH-H
T ss_conf 999999997398765679999999999999999999709999858999999999999984375789999997699912-2
Q ss_pred CEEEEEEEEECCC-----EEEEEEECCCCCCCCCCEEEEC-CCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCC
Q ss_conf 2077998510676-----3299993699989986524413-446665101355787715999057898983013565312
Q 000821 1097 CMAVLIQETICGD-----YAFVIHTKNPLSGDNSEIYTEI-VKGLGETLVGAYPGRAMSFVTKKNNLKSPIVTCYPSKLI 1170 (1267)
Q Consensus 1097 ~MAVLVQemV~ad-----~SGVlfT~nP~tgd~~~i~Iea-v~GLGEsLVsG~~G~p~~f~v~K~~~~~~~vl~~~sk~i 1170 (1267)
.|||+||+||.++ .|||+||+||.||++. +++++ ..||||.||+|.+ +|+.|++++.. .+ ..+.+
T Consensus 239 ~mAV~VQ~MV~g~~~~~s~SGV~FT~dP~TG~~~-~~ge~li~alGE~VVsG~v-tPd~~~v~~~~----~~---~~~~i 309 (913)
T 1h6z_A 239 GTAVNVQAMVFGNINDRSATGVAFSRSPSTGENF-FFGEYLVNAQGEDVVAGIR-TPQQINHSLSL----RW---AKAHG 309 (913)
T ss_dssp CCCEEEEECCCSCSSTTCEEEEEESSCSSSCCSS-CEEEEEESCCTTHHHHCCS-CCEESSHHHHH----HH---HTTSS
T ss_pred CCEEEEEEEECCCCCCCCEEEEEEECCCCCCCCC-EEEEEEEECCCCHHCCCCC-CCEEEEEECCC----CH---HHCCC
T ss_conf 6347999973268888613699983788888865-2468987347851304875-67079983463----10---01145
Q ss_pred CCCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEE
Q ss_conf 45688507851599975200014897022351697421012358998779611014999999999999998509973599
Q 000821 1171 GLYGKPSIIFRSDSNGEDLEKYAGAGLYDSVIMNDPEKVVLDYSRDPMVGDKSFQTSVFSKIAETGKIIESLYGYPQDIE 1250 (1267)
Q Consensus 1171 g~~~~~~~i~rsdsngedLe~~agaGl~~svp~~~~~~~~vdys~~plLtD~~~r~~ll~~La~la~~IE~~fG~PQDIE 1250 (1267)
..+ . ...... +..+.+.+++ +.+|++++..||++||.|||||
T Consensus 310 ~~~----------------------~--~~~~~~---------~~l~~l~p~~-----~~eLa~~a~~lE~hyg~pqDIE 351 (913)
T 1h6z_A 310 VGE----------------------E--ERRKRY---------PSMEEAMPEN-----YRLLCDVRKRLENHYRDMQDLE 351 (913)
T ss_dssp CCH----------------------H--HHHHHS---------CCHHHHSHHH-----HHHHHHHHHHHHHHHTSCEEEE
T ss_pred CHH----------------------H--HCCCCC---------HHHHHCCHHH-----HHHHHHHHHHHHHHHCCCCEEE
T ss_conf 434----------------------3--114582---------4444318999-----9999999999999839971379
Q ss_pred EEEECCEEEEEEECCC
Q ss_conf 9998896999961157
Q 000821 1251 GVLKDGLIYVVQARPQ 1266 (1267)
Q Consensus 1251 wai~~g~LyILQsRPq 1266 (1267)
|++++|+|||||+||.
T Consensus 352 wai~~G~LyILQaRP~ 367 (913)
T 1h6z_A 352 FTVQDGRLWLLQCRNG 367 (913)
T ss_dssp EEEETTEEEEEEEEEC
T ss_pred EEEECCEEEEEEECCC
T ss_conf 9987997999984576
No 5
>2x0s_A Pyruvate phosphate dikinase; transferase, tropical parasite; 3.00A {Trypanosoma brucei}
Probab=1.00 E-value=1 Score=333.57 Aligned_cols=268 Identities=20% Similarity=0.203 Sum_probs=182.2
Q ss_pred CCCEEEECC----CCCC---CCCCHHHHHHHHHHHHCCCCCCCCCCEEECHHHHHHHHHHC-CCHHHHHHHHHHHHHHC-
Q ss_conf 776137479----9798---75564418699854308996448995040978999999812-52049999999985408-
Q 000821 949 RGKYAVSVE----DFTP---DMVGAKSCNIKFLRERVPSWIKIPTSVAIPFGAFETVLSEN-INKDIANKISRLYKFIN- 1019 (1267)
Q Consensus 949 ~~~~vi~l~----e~~~---~~vGgKAanLa~L~~~lp~g~~VP~GfvIPfgafe~fL~~~-~n~~l~~~I~~l~a~l~- 1019 (1267)
..+||+++. |.+. ++||||+|||++|.+ .|++||+||+||+.+|++|++.+ ....+...|......++
T Consensus 3 ~~k~vy~F~~~~~e~~~~~~~LvGGKgAnLgEM~~---~GlpVP~GF~iTt~Ay~~fl~~~~l~~~i~~~l~~~l~~le~ 79 (913)
T 2x0s_A 3 AKKWVYYFGGGNADGNKNMKELLGGKGANLAEMVN---LGIPVPPGFTITTEACKTYQETETIPQEVADQVRENVSRVEK 79 (913)
T ss_dssp CCCCEEEECSSSCSSCTTCHHHHHHHHHHHHHHHH---TTCCCCCEEEECHHHHHHHHTSSCCCHHHHHHHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCCCCHHHHCCHHHHHHHHHHH---CCCCCCCCEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
T ss_conf 77479987998756884526518388888999997---838999978633999999997289748999999999998899
Q ss_pred -----CCCHH-------------H------------H--HHHHHHHHCCCCCHHH------------------------H
Q ss_conf -----99947-------------8------------9--9999999928999999------------------------9
Q 000821 1020 -----GGDLS-------------K------------L--QEIQEAVLQMSAPLSL------------------------I 1043 (1267)
Q Consensus 1020 -----~~d~~-------------~------------L--~~IR~~Il~~~lP~el------------------------~ 1043 (1267)
.++.. . + ..++.++...+-++.+ .
T Consensus 80 ~~~~~~gd~~~pLl~sVRsga~~smpgmmdtilnlgln~~~v~~l~~~~~~~~~~a~d~Yrr~~~~y~~~v~~v~~~~fe 159 (913)
T 2x0s_A 80 EMGAKFGDPANPLLFSVRSGAAASMPGMMDTVLNLGLNKVTVDAWVRRAPRLERFVYDSYRRFITMYADIVMQVGREDFE 159 (913)
T ss_dssp HHSCBTTCTTSBCCEEEEEECSCCC----CEEEEETCCHHHHTTTSTTCTTSHHHHHHHHHHHHHHHHHHHHCCCSHHHH
T ss_pred HHHHHHCCCCCCCHHEECCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHH
T ss_conf 85454178555302101025533577640557743465789999998679848899999999998777886477766589
Q ss_pred HHHHH--HHHHCCC-------CCCCCC------------------CHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCC
Q ss_conf 99999--9880199-------999972------------------29999999999993389858999999819998666
Q 000821 1044 YELKN--KMRSSGM-------PWPGDE------------------GWNLAWRSIKKVWASKWNERAFISCRKANLNHDNL 1096 (1267)
Q Consensus 1044 ~eL~~--a~RSSg~-------s~aG~~------------------g~e~l~~AIK~VWASlys~RAi~yRr~~Gi~~~~v 1096 (1267)
..+.. +.|||+. +|+|+. .+++++.||+.||||+||+||+.||+..|+++. +
T Consensus 160 ~~~~~~~~~rssa~~~dl~~as~a~~~~tyl~v~~~~~g~~fp~d~~~qL~~ai~~vfaSl~t~RAi~YR~~~g~~~~-~ 238 (913)
T 2x0s_A 160 EALSRMKERRGTKFDTDLTASDLKELCDGYLELFELKTGCSFPQDPVMQLFAAIKAVFRSWGNPRATIYRRMNNITGL-L 238 (913)
T ss_dssp HHHHHHHHHHTCSCGGGCCHHHHHHHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHHHHHHHCHHHHTHHHHSCCCCC-C
T ss_pred HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCC-C
T ss_conf 999999986086643459888999999999999998738877767899999999999987358879999985699853-4
Q ss_pred CEEEEEEEEECCC-----EEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCC
Q ss_conf 2077998510676-----32999936999899865244134466651013557877159990578989830135653124
Q 000821 1097 CMAVLIQETICGD-----YAFVIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAMSFVTKKNNLKSPIVTCYPSKLIG 1171 (1267)
Q Consensus 1097 ~MAVLVQemV~ad-----~SGVlfT~nP~tgd~~~i~Ieav~GLGEsLVsG~~G~p~~f~v~K~~~~~~~vl~~~sk~ig 1171 (1267)
.+||.||.||.++ .|||+||+||.||++..+.+.+++||||.||+|.+ +|+.|+..+... .+ ..+.++
T Consensus 239 ~laV~VQ~MV~~~~~~~s~SGVmFT~dp~TG~~~~~~~~~~~glGE~VV~G~v-tPd~~~~~~~~~---~~---~~~~~~ 311 (913)
T 2x0s_A 239 GTAVNVQAMVFGNINDRSATGVAFSRSPSTGENFFFGEYLVNAQGEDVVAGIR-TPQQINHSLSLR---WA---KAHGVG 311 (913)
T ss_dssp CCEEEEEECCCSCSSTTCEEEEEESSCTTTCCSSCEEEEEESCCTTHHHHCSS-CCBCSSHHHHHH---HH---HTTTCC
T ss_pred CCCEEEEEEEECCCCCCCCCEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCC-CCCCCCCCHHHH---HH---HHCCCC
T ss_conf 52238988644156764440589841888898767899835776840104777-872022104344---54---430333
Q ss_pred CCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEE
Q ss_conf 56885078515999752000148970223516974210123589987796110149999999999999985099735999
Q 000821 1172 LYGKPSIIFRSDSNGEDLEKYAGAGLYDSVIMNDPEKVVLDYSRDPMVGDKSFQTSVFSKIAETGKIIESLYGYPQDIEG 1251 (1267)
Q Consensus 1172 ~~~~~~~i~rsdsngedLe~~agaGl~~svp~~~~~~~~vdys~~plLtD~~~r~~ll~~La~la~~IE~~fG~PQDIEw 1251 (1267)
.+ .....|... ++........|++++..||.+|+.||||||
T Consensus 312 ~k----------------------------------~~~~~~~~~-----~~~~p~~~~~l~~~~~~lE~hy~~~qdiE~ 352 (913)
T 2x0s_A 312 EE----------------------------------ERRKRYPSM-----EEAMPENYRLLCDVRKRLENHYRDMQDLEF 352 (913)
T ss_dssp HH----------------------------------HHHHHSCCH-----HHHSHHHHHHHHHHHHHHHHHHSSCEEEEE
T ss_pred CC----------------------------------CCCCCCCCH-----HHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
T ss_conf 00----------------------------------234556626-----555479999999999999986384877578
Q ss_pred EEECCEEEEEEECCC
Q ss_conf 998896999961157
Q 000821 1252 VLKDGLIYVVQARPQ 1266 (1267)
Q Consensus 1252 ai~~g~LyILQsRPq 1266 (1267)
++.+|+||+||+||.
T Consensus 353 a~~~g~l~ilq~R~~ 367 (913)
T 2x0s_A 353 TVQDGRLWLLQCRNG 367 (913)
T ss_dssp EEETTEEEEEEEEEC
T ss_pred HHCCCCHHHHHHHHC
T ss_conf 760772698775222
No 6
>2ols_A Phosphoenolpyruvate synthase; MC structural genomics, PSI-2, protein structure initiative, M center for structural genomics, transferase; 2.40A {Neisseria meningitidis}
Probab=1.00 E-value=1 Score=49.22 Aligned_cols=100 Identities=14% Similarity=0.113 Sum_probs=69.1
Q ss_pred CCEEEEEEEEEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCC--CCCEEEECCCCCCCCCHHHHHCCCCCCEEEE-
Q ss_conf 8287530158899999322001122346899399993777754568--7717997699999650100100368720678-
Q 000821 814 CWQVISPVEVCGFITSVNELITLQNKVYRRPTIIIASRITGEEEIP--VGVVAVLTPDMPDVLSHVSIRARNNKVCFAT- 890 (1267)
Q Consensus 814 ~wqvispG~A~G~L~~V~~l~~v~~~~~~~p~Ili~~~~~G~EEIP--~~VaGVit~~~~~~LSHv~VRARn~gVp~at- 890 (1267)
.-..++||.+.|+++++....+.. ....+.||+.+.++- +++| ..++||||..-. ..||.+|.||.+|||-+.
T Consensus 362 ~G~~~~~g~~~G~v~~~~~~~~~~--~~~~g~ILv~~~~~p-~~~~~~~~~~givt~~Gg-~tSHaAivar~~giP~vvg 437 (794)
T 2ols_A 362 EGRAIGQKVGQGKVRLIKDASEMD--SVEAGDVLVTDMTDP-DWEPVMKRASAIVTNRGG-RTCHAAIIARELGIPAVVG 437 (794)
T ss_dssp BCBC--CCCCCBCBC----------------CEEEESCCCG-GGSHHHHTCSEEEESSCC-TTCHHHHHTTC---CEEEC
T ss_pred CCCCCCCCCCEEEEEEECCHHHHH--HCCCCEEEEECCCCH-HHHHHHHHCCEEEECCCC-CCCHHHHHHHHCCCCEEEC
T ss_conf 363157874069999964789997--567874999778998-999977647099984897-5149999986779999985
Q ss_pred ECCHHHHHHHHHCCCCEEEE---EECCCCEEEEE
Q ss_conf 32548888866408972999---98278359953
Q 000821 891 CFDQNILRNLRLKEGKAVSI---RLKSTNLIISD 921 (1267)
Q Consensus 891 ~~d~~~~~~l~~l~Gk~V~l---~vs~~~v~l~~ 921 (1267)
|.+ .... -.+|+.|.+ ..+...|...+
T Consensus 438 ~~~--~~~~--~~~G~~v~v~c~Dg~~G~v~~g~ 467 (794)
T 2ols_A 438 CGN--ATEL--LKNGQEVTVSCAEGDTGFIYAGL 467 (794)
T ss_dssp CTT--HHHH--SCSSCCEECCCC--CCCBCEECC
T ss_pred CCC--HHHC--CCCCCEEEEEECCCCCCEEEECC
T ss_conf 754--5650--65897899996689863699688
No 7
>2e28_A Pyruvate kinase, PK; allosteric, transferase; 2.40A {Geobacillus stearothermophilus}
Probab=1.00 E-value=1 Score=49.20 Aligned_cols=98 Identities=12% Similarity=0.125 Sum_probs=67.5
Q ss_pred EEEEEEEEEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCC--CCCEEEECCCCCCCCCHHHHHCCCCCCEEEEECC
Q ss_conf 87530158899999322001122346899399993777754568--7717997699999650100100368720678325
Q 000821 816 QVISPVEVCGFITSVNELITLQNKVYRRPTIIIASRITGEEEIP--VGVVAVLTPDMPDVLSHVSIRARNNKVCFATCFD 893 (1267)
Q Consensus 816 qvispG~A~G~L~~V~~l~~v~~~~~~~p~Ili~~~~~G~EEIP--~~VaGVit~~~~~~LSHv~VRARn~gVp~at~~d 893 (1267)
..++||.+.|+++++....+.. .....+.||+++..+-.+ +| ..++||+|..-+ ..||.+++||++|||-+.--.
T Consensus 482 ~~~~~g~~~G~v~v~~~~~~~~-~~~~~g~ILVa~~l~Ps~-~~~l~~~~Givt~~Gg-~tSHaAIlAR~lgIPaVvG~~ 558 (587)
T 2e28_A 482 QGIGRKSAFGKAVVAKTAEEAR-QKMVDGGILVTVSTDADM-MPAIEKAAAIITEEGG-LTSHAAVVGLSLGIPVIVGVE 558 (587)
T ss_dssp EEESSCEECCBEEECSSHHHHH-HHCCTTCEEEESCCCGGG-HHHHTTCSEEEESSCC-TTSHHHHHHHHHTCCEEECCT
T ss_pred CCCCCCEEEEEEEEECCHHHHH-HCCCCCEEEEECCCCHHH-HHHHHHCEEEEECCCC-CCCHHHHHHHHCCCCEEEECC
T ss_conf 3011875875179958878886-258998599987799899-9977751799976898-767999998875998899344
Q ss_pred HHHHHHHHHCCCCEEEEEECCCCEEE
Q ss_conf 48888866408972999982783599
Q 000821 894 QNILRNLRLKEGKAVSIRLKSTNLII 919 (1267)
Q Consensus 894 ~~~~~~l~~l~Gk~V~l~vs~~~v~l 919 (1267)
++...+ .+|+.|.+......+.+
T Consensus 559 -~~~~~l--~~G~~v~vDg~~G~V~~ 581 (587)
T 2e28_A 559 -NATTLF--KDGQEITVDGGFGAVYR 581 (587)
T ss_dssp -THHHHS--CTTCBEEEETTTTEEEE
T ss_pred -CHHHHC--CCCCEEEEECCCCEEEE
T ss_conf -088727--79989999999999998
No 8
>1vbg_A Pyruvate,orthophosphate dikinase; transferase, maize, riken structural genomics/proteomics INI RSGI, structural genomics; 2.30A {Zea mays} SCOP: c.1.12.2 c.8.1.1 d.142.1.5 PDB: 1vbh_A*
Probab=1.00 E-value=1 Score=47.62 Aligned_cols=104 Identities=18% Similarity=0.259 Sum_probs=64.3
Q ss_pred CCCEEEEEEEEEEEEEEECCCCCCCC-CCCCCCEEEEEECCCCCCCCCC--CCEEEECCCCCCCCCHHHHHCCCCCCEEE
Q ss_conf 98287530158899999322001122-3468993999937777545687--71799769999965010010036872067
Q 000821 813 GCWQVISPVEVCGFITSVNELITLQN-KVYRRPTIIIASRITGEEEIPV--GVVAVLTPDMPDVLSHVSIRARNNKVCFA 889 (1267)
Q Consensus 813 ~~wqvispG~A~G~L~~V~~l~~v~~-~~~~~p~Ili~~~~~G~EEIP~--~VaGVit~~~~~~LSHv~VRARn~gVp~a 889 (1267)
..-...+||.+.|++++ ...+... ....+|.|||...++= +++|. .+.||||..-+ ..||.+|.||++|||-+
T Consensus 396 ~~G~~as~G~a~G~vv~--~~~~~~~~~~~g~~~ILV~~~t~P-~~~~~~~~a~GivT~~GG-~tSHaAIvAR~lGiP~V 471 (876)
T 1vbg_A 396 ATGLPASPGAAVGQVVF--TAEDAEAWHSQGKAAILVRAETSP-EDVGGMHAAVGILTERGG-MTSHAAVVARGWGKCCV 471 (876)
T ss_dssp EECEEEECSEEEEEEES--SHHHHHHHHHTTCCEEEEESCCCT-TSHHHHHHSSEEEESSCC-TTSHHHHHHHHTTCCEE
T ss_pred ECCCCCCCCEEEEEEEE--CHHHHHHHHHCCCCEEEEECCCCH-HHHHHHHHCCEEEECCCC-CCCHHHHHHHHCCCCEE
T ss_conf 04744689818999997--789999875145987999827998-999767656389977898-76699999867599999
Q ss_pred E-ECCHHHHH---------HHHHCCCCEEEEEECCCCEEEEE
Q ss_conf 8-32548888---------86640897299998278359953
Q 000821 890 T-CFDQNILR---------NLRLKEGKAVSIRLKSTNLIISD 921 (1267)
Q Consensus 890 t-~~d~~~~~---------~l~~l~Gk~V~l~vs~~~v~l~~ 921 (1267)
. |.+.. ++ .-.-.+|..|.+..+...|.+.+
T Consensus 472 vG~~~~~-~~~~~~~~~~~~~~l~~G~~vtvDG~~G~V~~g~ 512 (876)
T 1vbg_A 472 SGCSGIR-VNDAEKLVTIGGHVLREGEWLSLNGSTGEVILGK 512 (876)
T ss_dssp ECCTTEE-EEGGGTEEEETTEEEETTCEEEEETTTTEEEESC
T ss_pred ECCCCCE-ECCCCCEEEECCEEECCCCEEEEECCCCEEEECC
T ss_conf 8578755-4011466876784623898899989988799798
No 9
>1kbl_A PPDK, pyruvate phosphate dikinase; transferase, phosphotransferase; 1.94A {Clostridium symbiosum} SCOP: c.1.12.2 c.8.1.1 d.142.1.5 PDB: 1kc7_A* 1dik_A 1ggo_A 1jde_A 2dik_A 2r82_A 2fm4_A
Probab=1.00 E-value=1 Score=47.48 Aligned_cols=105 Identities=18% Similarity=0.235 Sum_probs=64.8
Q ss_pred CCCCEEEEEEEEEEEEEEECCCCCCCC-CCCCCCEEEEEECCCCCCCCCC--CCEEEECCCCCCCCCHHHHHCCCCCCEE
Q ss_conf 898287530158899999322001122-3468993999937777545687--7179976999996501001003687206
Q 000821 812 LGCWQVISPVEVCGFITSVNELITLQN-KVYRRPTIIIASRITGEEEIPV--GVVAVLTPDMPDVLSHVSIRARNNKVCF 888 (1267)
Q Consensus 812 ~~~wqvispG~A~G~L~~V~~l~~v~~-~~~~~p~Ili~~~~~G~EEIP~--~VaGVit~~~~~~LSHv~VRARn~gVp~ 888 (1267)
+..=...+||.+.|++++ + ..+... .....|.|||...++ -++++. .+.||||..-+ ..||.+|.||++|||-
T Consensus 391 l~~G~~as~G~a~G~vv~-~-~~~a~~~~~~g~~~ILV~~~t~-P~~~~~~~~a~GivT~~GG-~tSHaAIvAR~lGiP~ 466 (873)
T 1kbl_A 391 IGSALPASPGAAAGKVYF-T-ADEAKAAHEKGERVILVRLETS-PEDIEGMHAAEGILTVRGG-MTSHAAVVARGMGTCC 466 (873)
T ss_dssp EEECEEEECSEEEEEEES-S-HHHHHHHHHTTCCEEEEESSCC-GGGHHHHHHCSEEEESSCC-TTSHHHHHHHHHTCEE
T ss_pred ECCCCCCCCCEEEEEEEE-C-HHHHHHHHCCCCCEEEEECCCC-HHHHHHHHHCCEEEECCCC-CCCHHHHHHHHCCCCE
T ss_conf 205820468638999998-4-8898776325798799978899-8999978762389966898-7669999986769999
Q ss_pred EE-ECCHHHHH---------HHHHCCCCEEEEEECCCCEEEEE
Q ss_conf 78-32548888---------86640897299998278359953
Q 000821 889 AT-CFDQNILR---------NLRLKEGKAVSIRLKSTNLIISD 921 (1267)
Q Consensus 889 at-~~d~~~~~---------~l~~l~Gk~V~l~vs~~~v~l~~ 921 (1267)
+. |.+.. ++ .-.-.+|..|.+..+...|.+.+
T Consensus 467 VvG~~~~~-i~~~~~~~~~~~~~l~~G~~vtvDG~~G~V~~g~ 508 (873)
T 1kbl_A 467 VSGCGEIK-INEEAKTFELGGHTFAEGDYISLDGSTGKIYKGD 508 (873)
T ss_dssp EECCTTCE-EETTTTEEEETTEEEETTCEEEEETTTCEEEESC
T ss_pred EECCCCCE-ECCCCCEEEECCEEECCCCEEEEECCCCEEEECC
T ss_conf 98578754-3011467876785624898899989988799798
No 10
>3t05_A Pyruvate kinase, PK; tetramer, glycolysis, transferase; 3.05A {Staphylococcus aureus subsp} PDB: 3t07_A* 3t0t_A*
Probab=1.00 E-value=1 Score=47.25 Aligned_cols=97 Identities=14% Similarity=0.169 Sum_probs=67.6
Q ss_pred EEEEEEEEEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCC--CCCEEEECCCCCCCCCHHHHHCCCCCCEEEEECC
Q ss_conf 87530158899999322001122346899399993777754568--7717997699999650100100368720678325
Q 000821 816 QVISPVEVCGFITSVNELITLQNKVYRRPTIIIASRITGEEEIP--VGVVAVLTPDMPDVLSHVSIRARNNKVCFATCFD 893 (1267)
Q Consensus 816 qvispG~A~G~L~~V~~l~~v~~~~~~~p~Ili~~~~~G~EEIP--~~VaGVit~~~~~~LSHv~VRARn~gVp~at~~d 893 (1267)
+.+++|.+.|+++++....+.. ..+..+.||+++..+-. +++ ..++||+|..-+ ..||.+++||++|||-+.--.
T Consensus 501 ~~i~~G~v~G~v~vv~~~~da~-~~~~~g~ILVa~~l~Ps-~~~~l~~v~GiVte~Gg-~tSHaAIlAR~lgIPaVvG~~ 577 (606)
T 3t05_A 501 QGIGRGSVVGTTLVAETVKDLE-GKDLSDKVIVTNSIDET-FVPYVEKALGLITEENG-ITSPSAIVGLEKGIPTVVGVE 577 (606)
T ss_dssp EEESSCEEEEEEEECSSGGGGS-SSCCSSEEEEESCCCTT-THHHHTTSSEEEESSCC-SSSHHHHHHHHTTCCEEECCT
T ss_pred CCCCCCEEEEEEEEECCHHHHH-HCCCCCEEEEECCCCHH-HHHHHHHHEEEEECCCC-CCCHHHHHHHHCCCCEEEECC
T ss_conf 5321204899999978867886-45898869998889989-99998863799863798-556899997547999999264
Q ss_pred HHHHHHHHHCCCCEEEEEECCCCEEE
Q ss_conf 48888866408972999982783599
Q 000821 894 QNILRNLRLKEGKAVSIRLKSTNLII 919 (1267)
Q Consensus 894 ~~~~~~l~~l~Gk~V~l~vs~~~v~l 919 (1267)
. ... .-.+|+.|.+.... |..+
T Consensus 578 ~-a~~--~l~~G~~V~vDg~~-G~V~ 599 (606)
T 3t05_A 578 K-AVK--NISNNVLVTIDAAQ-GKIF 599 (606)
T ss_dssp T-HHH--HSCSSCEEEEETTT-TEEE
T ss_pred C-HHH--HCCCCCEEEEECCC-CEEE
T ss_conf 2-786--17799999999999-9899
Done!