Query 000823
Match_columns 1267
No_of_seqs 580 out of 4070
Neff 5.7
Searched_HMMs 13730
Date Tue Mar 26 17:57:19 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/000823.a3m -d /local_scratch/syshi/scop70.hhm -v 0 -o /local_scratch/syshi/H1_591-595//hhsearch_scop/000823hhsearch_scop
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1lv7a_ c.37.1.20 (A:) AAA dom 100.0 9.5E-40 7E-44 310.5 23.5 247 927-1233 4-254 (256)
2 d1ixza_ c.37.1.20 (A:) AAA dom 100.0 7.8E-39 5.7E-43 303.6 22.5 240 929-1228 3-246 (247)
3 d1e32a2 c.37.1.20 (A:201-458) 100.0 1.6E-38 1.2E-42 301.3 19.5 255 932-1230 1-258 (258)
4 d1r7ra3 c.37.1.20 (A:471-735) 100.0 1.7E-36 1.3E-40 286.1 13.6 258 930-1230 2-263 (265)
5 d1d2na_ c.37.1.20 (A:) Hexamer 99.9 4.2E-25 3.1E-29 201.1 8.0 176 967-1148 37-215 (246)
6 d1ofha_ c.37.1.20 (A:) HslU {H 99.9 2.7E-23 1.9E-27 187.7 13.1 182 936-1117 15-213 (309)
7 d1lv7a_ c.37.1.20 (A:) AAA dom 99.9 5E-21 3.6E-25 170.8 20.0 236 418-892 2-251 (256)
8 d1e32a2 c.37.1.20 (A:201-458) 99.9 9.6E-21 7E-25 168.6 18.0 207 425-847 1-218 (258)
9 d1w44a_ c.37.1.11 (A:) NTPase 99.9 5.1E-24 3.7E-28 193.1 -1.4 161 956-1121 109-277 (321)
10 d1gxca_ b.26.1.2 (A:) Chk2 kin 99.9 4.1E-21 3E-25 171.4 12.2 105 126-230 1-115 (116)
11 d1in4a2 c.37.1.20 (A:17-254) H 99.8 9.9E-19 7.2E-23 153.6 22.4 221 932-1231 6-234 (238)
12 d1ixza_ c.37.1.20 (A:) AAA dom 99.8 1.3E-19 9.6E-24 160.1 16.2 208 422-846 3-224 (247)
13 d1ixsb2 c.37.1.20 (B:4-242) Ho 99.8 2.9E-17 2.1E-21 142.7 20.8 192 932-1145 6-205 (239)
14 d1r7ra3 c.37.1.20 (A:471-735) 99.8 1E-18 7.6E-23 153.4 12.0 207 424-846 3-223 (265)
15 d1sxjc2 c.37.1.20 (C:12-238) R 99.7 3.7E-16 2.7E-20 134.4 16.9 184 932-1150 11-200 (227)
16 d1njfa_ c.37.1.20 (A:) delta p 99.7 4.4E-15 3.2E-19 126.4 21.4 174 932-1145 9-211 (239)
17 d1iqpa2 c.37.1.20 (A:2-232) Re 99.7 8E-16 5.8E-20 131.9 16.2 179 932-1147 21-207 (231)
18 d1lgpa_ b.26.1.2 (A:) Cell cyc 99.7 3.4E-17 2.5E-21 142.2 8.8 104 124-229 1-112 (113)
19 d1qvra3 c.37.1.20 (A:536-850) 99.7 1.1E-14 7.9E-19 123.5 18.3 168 936-1120 24-237 (315)
20 d1sxja2 c.37.1.20 (A:295-547) 99.7 3.3E-15 2.4E-19 127.3 15.4 201 932-1151 11-227 (253)
21 d1sxjd2 c.37.1.20 (D:26-262) R 99.7 5.2E-14 3.8E-18 118.4 21.0 183 932-1149 9-208 (237)
22 d1fnna2 c.37.1.20 (A:1-276) CD 99.6 1.6E-13 1.2E-17 114.8 21.9 225 935-1232 16-274 (276)
23 d1r6bx3 c.37.1.20 (X:437-751) 99.6 4.8E-15 3.5E-19 126.1 14.1 168 936-1120 23-232 (315)
24 d1sxjb2 c.37.1.20 (B:7-230) Re 99.6 2E-14 1.4E-18 121.5 16.9 177 932-1149 12-201 (224)
25 d1sxje2 c.37.1.20 (E:4-255) Re 99.6 3.3E-14 2.4E-18 119.8 17.3 188 931-1152 7-235 (252)
26 d1r6bx2 c.37.1.20 (X:169-436) 99.6 2.7E-13 2E-17 113.1 21.7 163 934-1120 17-196 (268)
27 d1w5sa2 c.37.1.20 (A:7-293) CD 99.6 1.9E-13 1.4E-17 114.1 18.2 233 935-1230 16-286 (287)
28 d1um8a_ c.37.1.20 (A:) ClpX {H 99.6 2.3E-14 1.7E-18 121.1 13.1 181 936-1116 18-280 (364)
29 d1qvra2 c.37.1.20 (A:149-535) 99.6 1.4E-17 1E-21 145.1 -5.1 148 673-873 100-252 (387)
30 d1g8pa_ c.37.1.20 (A:) ATPase 99.6 8.7E-14 6.3E-18 116.7 14.2 261 932-1238 4-312 (333)
31 d1svma_ c.37.1.20 (A:) Papillo 99.5 5.6E-16 4.1E-20 133.0 0.1 161 971-1147 155-326 (362)
32 d1dmza_ b.26.1.2 (A:) Phosphot 99.5 7.9E-14 5.8E-18 117.0 9.0 102 127-228 5-123 (158)
33 d1g41a_ c.37.1.20 (A:) HslU {H 99.5 7.3E-12 5.3E-16 102.4 18.1 91 419-515 4-97 (443)
34 d1r6bx2 c.37.1.20 (X:169-436) 99.4 7.3E-14 5.3E-18 117.3 6.9 161 673-889 95-261 (268)
35 d1l8qa2 c.37.1.20 (A:77-289) C 99.4 3.5E-11 2.5E-15 97.3 18.7 191 931-1150 6-209 (213)
36 d1jbka_ c.37.1.20 (A:) ClpB, A 99.4 1.4E-12 1.1E-16 107.6 10.3 156 935-1115 22-195 (195)
37 d1a5ta2 c.37.1.20 (A:1-207) de 99.4 9.8E-11 7.1E-15 93.9 19.4 168 938-1143 5-200 (207)
38 d1qvra2 c.37.1.20 (A:149-535) 99.4 2.9E-12 2.1E-16 105.3 11.2 163 934-1121 21-200 (387)
39 d1g6ga_ b.26.1.2 (A:) Phosphot 99.4 3.3E-12 2.4E-16 105.0 10.2 91 126-219 4-108 (127)
40 d2brfa1 b.26.1.2 (A:8-108) Pol 99.3 2.5E-11 1.8E-15 98.4 10.4 94 128-226 1-98 (101)
41 d2piea1 b.26.1.2 (A:13-139) Ub 99.2 3.3E-11 2.4E-15 97.4 10.6 102 125-230 4-115 (127)
42 d2ff4a3 b.26.1.2 (A:284-382) P 99.2 5.4E-11 4E-15 95.8 11.1 93 125-227 4-97 (99)
43 d1d2na_ c.37.1.20 (A:) Hexamer 99.2 1.1E-10 7.7E-15 93.7 10.3 59 675-736 87-155 (246)
44 d2affa1 b.26.1.2 (A:3-100) Ant 99.1 2.4E-10 1.8E-14 91.0 10.5 83 136-227 14-97 (98)
45 d1uhta_ b.26.1.2 (A:) FHA doma 99.1 1.3E-10 9.6E-15 93.0 8.1 82 140-228 27-111 (118)
46 d1ofha_ c.37.1.20 (A:) HslU {H 99.1 6.3E-10 4.6E-14 87.9 10.8 83 420-506 5-87 (309)
47 d1w44a_ c.37.1.11 (A:) NTPase 99.1 2.3E-13 1.7E-17 113.6 -7.5 136 632-812 125-276 (321)
48 d1mzka_ b.26.1.2 (A:) Kinase a 99.1 4E-10 2.9E-14 89.4 9.0 77 145-224 30-115 (122)
49 d2g1la1 b.26.1.2 (A:498-599) K 99.1 2E-09 1.4E-13 84.2 12.4 81 141-226 20-101 (102)
50 d1ny5a2 c.37.1.20 (A:138-384) 98.9 7.4E-09 5.4E-13 79.9 11.3 140 971-1120 24-190 (247)
51 d2gnoa2 c.37.1.20 (A:11-208) g 98.9 2.1E-08 1.5E-12 76.5 12.1 117 969-1107 14-140 (198)
52 d1gvnb_ c.37.1.21 (B:) Plasmid 98.9 4E-10 2.9E-14 89.4 2.5 68 932-1009 4-71 (273)
53 d2fnaa2 c.37.1.20 (A:1-283) Ar 98.8 8.2E-06 6E-10 57.2 24.8 181 933-1146 10-247 (283)
54 d1wlna1 b.26.1.2 (A:8-114) Afa 98.8 1.1E-08 7.9E-13 78.7 8.8 79 141-227 25-106 (107)
55 d1jbka_ c.37.1.20 (A:) ClpB, A 98.8 6.5E-10 4.7E-14 87.8 2.5 90 674-807 101-195 (195)
56 d1in4a2 c.37.1.20 (A:17-254) H 98.2 0.00018 1.3E-08 47.2 17.4 65 426-504 7-71 (238)
57 d1ye8a1 c.37.1.11 (A:1-178) Hy 97.9 0.00013 9.3E-09 48.3 11.1 118 972-1106 2-164 (178)
58 d1sxja2 c.37.1.20 (A:295-547) 97.8 0.0014 1E-07 40.6 18.7 77 426-506 12-90 (253)
59 d1um8a_ c.37.1.20 (A:) ClpX {H 97.7 0.00067 4.9E-08 42.9 12.2 69 436-506 23-106 (364)
60 d2a5yb3 c.37.1.20 (B:109-385) 97.7 0.002 1.5E-07 39.3 14.7 186 916-1145 7-226 (277)
61 d1p9ra_ c.37.1.11 (A:) Extrace 97.4 0.0011 8.2E-08 41.3 10.0 99 927-1040 130-238 (401)
62 d1sxje2 c.37.1.20 (E:4-255) Re 97.3 0.0036 2.6E-07 37.5 11.9 75 691-812 131-205 (252)
63 d1tf7a2 c.37.1.11 (A:256-497) 97.2 0.0057 4.2E-07 36.0 12.3 107 969-1083 25-162 (242)
64 d1lw7a2 c.37.1.1 (A:220-411) T 97.2 0.00015 1.1E-08 47.8 3.9 40 970-1009 7-46 (192)
65 d1kaga_ c.37.1.2 (A:) Shikimat 97.2 0.0004 2.9E-08 44.6 5.9 32 971-1002 3-34 (169)
66 d1qvra3 c.37.1.20 (A:536-850) 97.1 0.0042 3.1E-07 37.0 10.7 37 468-506 55-94 (315)
67 d1g41a_ c.37.1.20 (A:) HslU {H 97.0 0.00025 1.8E-08 46.2 3.9 180 936-1115 15-345 (443)
68 d1ixsb2 c.37.1.20 (B:4-242) Ho 97.0 0.0011 7.8E-08 41.4 7.1 65 426-504 7-71 (239)
69 d1r6bx3 c.37.1.20 (X:437-751) 97.0 0.01 7.5E-07 34.1 15.3 63 436-506 28-90 (315)
70 d1svma_ c.37.1.20 (A:) Papillo 97.0 7.4E-05 5.4E-09 50.1 0.9 38 464-503 152-189 (362)
71 d1u94a1 c.37.1.11 (A:6-268) Re 96.8 0.004 2.9E-07 37.1 8.7 75 969-1043 53-146 (263)
72 d1rkba_ c.37.1.1 (A:) Adenylat 96.8 0.00052 3.8E-08 43.7 3.7 32 971-1002 5-36 (173)
73 d1viaa_ c.37.1.2 (A:) Shikimat 96.7 0.00056 4.1E-08 43.5 3.7 32 971-1002 1-32 (161)
74 d1okkd2 c.37.1.10 (D:97-303) G 96.7 0.015 1.1E-06 32.9 11.0 114 970-1091 6-144 (207)
75 d1tuea_ c.37.1.20 (A:) Replica 96.7 0.0097 7.1E-07 34.3 9.5 123 971-1120 54-202 (205)
76 d1e6ca_ c.37.1.2 (A:) Shikimat 96.7 0.0007 5.1E-08 42.8 3.7 32 971-1002 3-34 (170)
77 d1xp8a1 c.37.1.11 (A:15-282) R 96.6 0.013 9.6E-07 33.3 10.1 113 971-1085 58-194 (268)
78 d2qy9a2 c.37.1.10 (A:285-495) 96.6 0.02 1.4E-06 32.0 13.3 115 969-1090 8-146 (211)
79 d1cr2a_ c.37.1.11 (A:) Gene 4 96.6 0.018 1.3E-06 32.2 10.6 36 968-1003 33-72 (277)
80 d2iyva1 c.37.1.2 (A:2-166) Shi 96.5 0.00099 7.2E-08 41.7 3.8 31 972-1002 3-33 (165)
81 d1w36d1 c.37.1.19 (D:2-360) Ex 96.5 0.016 1.2E-06 32.6 9.9 38 940-994 150-187 (359)
82 d1zp6a1 c.37.1.25 (A:6-181) Hy 96.5 0.00072 5.2E-08 42.7 3.0 36 971-1006 5-40 (176)
83 d1knqa_ c.37.1.17 (A:) Glucona 96.4 0.0018 1.3E-07 39.6 4.7 35 969-1003 5-39 (171)
84 d1bifa1 c.37.1.7 (A:37-249) 6- 96.4 0.027 2E-06 30.9 11.7 34 971-1004 3-39 (213)
85 d1qhxa_ c.37.1.3 (A:) Chloramp 96.4 0.0022 1.6E-07 39.1 4.7 33 971-1003 4-36 (178)
86 d1j8yf2 c.37.1.10 (F:87-297) G 96.3 0.018 1.3E-06 32.4 8.8 72 968-1039 10-104 (211)
87 d1ls1a2 c.37.1.10 (A:89-295) G 96.2 0.034 2.5E-06 30.2 10.3 34 971-1004 11-47 (207)
88 d1qf9a_ c.37.1.1 (A:) UMP/CMP 96.1 0.0036 2.6E-07 37.5 4.9 38 967-1007 4-41 (194)
89 d2i3ba1 c.37.1.11 (A:1-189) Ca 96.1 0.0034 2.5E-07 37.7 4.6 24 971-994 2-25 (189)
90 d1ak2a1 c.37.1.1 (A:14-146,A:1 96.1 0.0039 2.8E-07 37.2 4.9 31 971-1001 4-34 (190)
91 d2bdta1 c.37.1.25 (A:1-176) Hy 96.1 0.0025 1.8E-07 38.6 4.0 29 971-999 3-31 (176)
92 d1zaka1 c.37.1.1 (A:3-127,A:15 96.1 0.0021 1.5E-07 39.2 3.5 35 971-1007 4-38 (189)
93 d1zina1 c.37.1.1 (A:1-125,A:16 96.1 0.0037 2.7E-07 37.4 4.8 31 972-1002 2-32 (182)
94 d2ak3a1 c.37.1.1 (A:0-124,A:16 96.1 0.004 2.9E-07 37.1 4.9 35 971-1007 7-41 (189)
95 d1y63a_ c.37.1.1 (A:) Probable 96.0 0.0039 2.8E-07 37.2 4.6 30 970-999 5-35 (174)
96 d2cdna1 c.37.1.1 (A:1-181) Ade 96.0 0.0032 2.4E-07 37.8 4.0 30 972-1001 2-31 (181)
97 d1g6oa_ c.37.1.11 (A:) Hexamer 96.0 0.0047 3.4E-07 36.6 4.8 69 971-1039 167-245 (323)
98 d1ukza_ c.37.1.1 (A:) Uridylat 95.9 0.005 3.7E-07 36.4 4.8 31 971-1001 9-39 (196)
99 d3adka_ c.37.1.1 (A:) Adenylat 95.9 0.005 3.6E-07 36.4 4.6 36 971-1008 9-44 (194)
100 d1ckea_ c.37.1.1 (A:) CMP kina 95.9 0.0045 3.3E-07 36.8 4.3 33 972-1006 5-37 (225)
101 d1teva_ c.37.1.1 (A:) UMP/CMP 95.8 0.0056 4.1E-07 36.1 4.6 35 971-1007 2-36 (194)
102 d1s3ga1 c.37.1.1 (A:1-125,A:16 95.8 0.006 4.4E-07 35.8 4.8 30 972-1001 2-31 (182)
103 d1yj5a2 c.37.1.1 (A:351-522) 5 95.8 0.01 7.6E-07 34.0 6.0 62 969-1039 13-74 (172)
104 d1mo6a1 c.37.1.11 (A:1-269) Re 95.8 0.033 2.4E-06 30.3 8.4 75 969-1043 59-152 (269)
105 d1akya1 c.37.1.1 (A:3-130,A:16 95.8 0.0062 4.5E-07 35.7 4.7 32 971-1002 3-34 (180)
106 d1q3ta_ c.37.1.1 (A:) CMP kina 95.7 0.0061 4.4E-07 35.8 4.4 29 972-1000 5-33 (223)
107 d1vmaa2 c.37.1.10 (A:82-294) G 95.6 0.061 4.4E-06 28.3 13.0 35 969-1003 10-47 (213)
108 d1e4va1 c.37.1.1 (A:1-121,A:15 95.6 0.0079 5.7E-07 34.9 4.6 30 972-1001 2-31 (179)
109 d1m8pa3 c.37.1.15 (A:391-573) 95.5 0.007 5.1E-07 35.3 4.2 26 971-996 7-32 (183)
110 d1tf7a1 c.37.1.11 (A:14-255) C 95.5 0.066 4.8E-06 28.1 11.0 77 968-1044 24-140 (242)
111 d1iqpa2 c.37.1.20 (A:2-232) Re 95.4 0.017 1.2E-06 32.4 5.8 76 690-812 108-183 (231)
112 d1sxjc2 c.37.1.20 (C:12-238) R 95.2 0.033 2.4E-06 30.3 6.9 75 690-811 98-172 (227)
113 d1x6va3 c.37.1.4 (A:34-228) Ad 95.1 0.0022 1.6E-07 39.1 0.6 29 971-999 20-48 (195)
114 d1w5sa2 c.37.1.20 (A:7-293) CD 95.1 0.04 2.9E-06 29.7 7.0 101 673-812 116-224 (287)
115 d1a1va1 c.37.1.14 (A:190-325) 95.1 0.084 6.1E-06 27.3 9.3 33 971-1003 9-41 (136)
116 d1njfa_ c.37.1.20 (A:) delta p 95.1 0.026 1.9E-06 31.1 6.0 76 690-812 114-189 (239)
117 d1u0ja_ c.37.1.20 (A:) Rep 40 95.0 0.043 3.1E-06 29.4 7.0 112 970-1103 104-228 (267)
118 d1ly1a_ c.37.1.1 (A:) Polynucl 94.8 0.016 1.1E-06 32.7 4.3 35 971-1006 3-37 (152)
119 d1szpa2 c.37.1.11 (A:145-395) 94.5 0.1 7.5E-06 26.6 7.8 37 968-1004 32-77 (251)
120 d1gvnb_ c.37.1.21 (B:) Plasmid 94.4 0.02 1.5E-06 31.9 4.1 39 466-506 32-70 (273)
121 d1m7ga_ c.37.1.4 (A:) Adenosin 94.3 0.035 2.6E-06 30.1 5.0 37 971-1007 25-65 (208)
122 d1nlfa_ c.37.1.11 (A:) Hexamer 94.2 0.13 9.7E-06 25.8 10.2 136 969-1112 28-221 (274)
123 d1khta_ c.37.1.1 (A:) Adenylat 93.9 0.029 2.1E-06 30.7 4.1 26 971-996 2-27 (190)
124 d1sxjb2 c.37.1.20 (B:7-230) Re 93.9 0.084 6.1E-06 27.3 6.3 75 691-812 101-175 (224)
125 d1fnna2 c.37.1.20 (A:1-276) CD 93.8 0.16 1.2E-05 25.2 13.9 97 674-812 109-207 (276)
126 d1np6a_ c.37.1.10 (A:) Molybdo 93.7 0.049 3.5E-06 29.0 4.8 31 972-1002 4-37 (170)
127 d1a5ta2 c.37.1.20 (A:1-207) de 93.2 0.2 1.4E-05 24.5 10.0 87 676-809 92-179 (207)
128 d1nksa_ c.37.1.1 (A:) Adenylat 93.2 0.054 3.9E-06 28.7 4.3 33 971-1003 2-37 (194)
129 d1lvga_ c.37.1.1 (A:) Guanylat 93.1 0.049 3.6E-06 29.0 4.0 30 972-1001 2-31 (190)
130 d1sxjd2 c.37.1.20 (D:26-262) R 93.0 0.057 4.1E-06 28.5 4.3 76 690-812 107-182 (237)
131 d1lw7a2 c.37.1.1 (A:220-411) T 93.0 0.029 2.1E-06 30.7 2.8 37 466-504 7-43 (192)
132 d1rz3a_ c.37.1.6 (A:) Hypothet 92.8 0.22 1.6E-05 24.2 8.0 34 971-1004 23-59 (198)
133 d1yksa1 c.37.1.14 (A:185-324) 92.7 0.16 1.1E-05 25.2 6.2 25 970-994 7-32 (140)
134 d1gkya_ c.37.1.1 (A:) Guanylat 92.3 0.083 6E-06 27.3 4.3 29 972-1000 3-31 (186)
135 d1gkub1 c.37.1.16 (B:1-250) He 92.0 0.27 2E-05 23.4 10.0 32 971-1002 59-93 (237)
136 d2fz4a1 c.37.1.19 (A:24-229) D 91.6 0.3 2.2E-05 23.2 8.8 32 972-1003 87-118 (206)
137 d1sq5a_ c.37.1.6 (A:) Pantothe 90.4 0.39 2.8E-05 22.3 6.7 40 967-1006 77-121 (308)
138 d1v5wa_ c.37.1.11 (A:) Meiotic 90.0 0.2 1.5E-05 24.4 4.5 28 967-994 34-61 (258)
139 d2p6ra3 c.37.1.19 (A:1-202) He 89.9 0.42 3.1E-05 22.1 6.7 23 971-993 41-64 (202)
140 d2pmka1 c.37.1.12 (A:467-707) 89.7 0.44 3.2E-05 21.9 8.2 25 970-994 29-53 (241)
141 d1znwa1 c.37.1.1 (A:20-201) Gu 89.6 0.17 1.3E-05 25.0 3.8 25 971-995 3-27 (182)
142 d1ksha_ c.37.1.8 (A:) ADP-ribo 89.5 0.31 2.3E-05 23.0 5.1 23 971-993 3-25 (165)
143 d1ctqa_ c.37.1.8 (A:) cH-p21 R 89.5 0.45 3.3E-05 21.8 6.0 22 972-993 5-26 (166)
144 d1htwa_ c.37.1.18 (A:) Hypothe 89.4 0.24 1.8E-05 23.8 4.5 30 968-997 31-60 (158)
145 d1xjca_ c.37.1.10 (A:) Molybdo 89.4 0.34 2.5E-05 22.7 5.2 33 971-1003 2-37 (165)
146 d1n0wa_ c.37.1.11 (A:) DNA rep 89.3 0.18 1.3E-05 24.8 3.8 28 967-994 20-47 (242)
147 d1kkma_ c.91.1.2 (A:) HPr kina 89.1 0.2 1.5E-05 24.4 3.9 34 970-1004 14-47 (176)
148 d1uj2a_ c.37.1.6 (A:) Uridine- 89.0 0.18 1.3E-05 24.8 3.6 27 971-997 3-29 (213)
149 d1odfa_ c.37.1.6 (A:) Hypothet 89.0 0.49 3.5E-05 21.6 7.1 37 970-1006 27-69 (286)
150 d1pzna2 c.37.1.11 (A:96-349) D 88.8 0.19 1.4E-05 24.7 3.6 26 969-994 35-60 (254)
151 d1azta2 c.37.1.8 (A:35-65,A:20 88.7 0.5 3.7E-05 21.5 6.3 34 971-1004 7-45 (221)
152 d1h65a_ c.37.1.8 (A:) Chloropl 88.7 0.51 3.7E-05 21.4 7.5 25 970-994 32-56 (257)
153 d1l8qa2 c.37.1.20 (A:77-289) C 88.6 0.52 3.8E-05 21.4 5.8 59 423-495 5-63 (213)
154 d1zd9a1 c.37.1.8 (A:18-181) AD 88.5 0.52 3.8E-05 21.4 11.2 23 972-994 4-26 (164)
155 d1pjra1 c.37.1.19 (A:1-318) DE 88.3 0.21 1.5E-05 24.4 3.5 24 971-994 25-49 (318)
156 d2a5ja1 c.37.1.8 (A:9-181) Rab 88.2 0.39 2.8E-05 22.3 4.9 22 972-993 5-26 (173)
157 d2fh5b1 c.37.1.8 (B:63-269) Si 87.9 0.56 4.1E-05 21.1 10.1 23 971-993 1-23 (207)
158 d2hyda1 c.37.1.12 (A:324-578) 87.9 0.57 4.1E-05 21.1 7.6 24 971-994 45-68 (255)
159 d1wb9a2 c.37.1.12 (A:567-800) 87.7 0.58 4.2E-05 21.0 11.1 104 971-1089 42-168 (234)
160 d2gj8a1 c.37.1.8 (A:216-376) P 87.7 0.58 4.2E-05 21.0 8.3 22 972-993 3-24 (161)
161 d1wf3a1 c.37.1.8 (A:3-180) GTP 87.7 0.58 4.2E-05 21.0 10.0 23 971-993 6-28 (178)
162 d1fzqa_ c.37.1.8 (A:) ADP-ribo 87.5 0.59 4.3E-05 20.9 6.5 22 971-992 17-38 (176)
163 d2p67a1 c.37.1.10 (A:1-327) LA 87.5 0.6 4.3E-05 20.9 7.0 36 970-1005 54-94 (327)
164 d1qhxa_ c.37.1.3 (A:) Chloramp 87.4 0.32 2.3E-05 22.9 4.1 38 465-504 2-39 (178)
165 d1e9ra_ c.37.1.11 (A:) Bacteri 87.2 0.42 3.1E-05 22.1 4.6 74 1029-1120 276-359 (433)
166 d1uaaa1 c.37.1.19 (A:2-307) DE 87.0 0.25 1.9E-05 23.7 3.4 23 971-993 15-38 (306)
167 d1ko7a2 c.91.1.2 (A:130-298) H 87.0 0.31 2.3E-05 23.0 3.8 32 970-1002 15-46 (169)
168 d1uf9a_ c.37.1.1 (A:) Dephosph 86.8 0.36 2.6E-05 22.5 4.1 31 971-1002 4-34 (191)
169 d1knxa2 c.91.1.2 (A:133-309) H 86.7 0.25 1.8E-05 23.7 3.2 33 970-1003 15-47 (177)
170 d1yrba1 c.37.1.10 (A:1-244) AT 86.7 0.52 3.8E-05 21.3 4.8 22 973-994 3-24 (244)
171 d1kgda_ c.37.1.1 (A:) Guanylat 86.7 0.36 2.6E-05 22.6 4.0 26 971-996 4-29 (178)
172 d1e0sa_ c.37.1.8 (A:) ADP-ribo 86.5 0.67 4.9E-05 20.6 6.3 23 971-993 13-35 (173)
173 d1hv8a1 c.37.1.19 (A:3-210) Pu 86.5 0.67 4.9E-05 20.5 8.4 60 932-993 4-65 (208)
174 d1s96a_ c.37.1.1 (A:) Guanylat 86.2 0.3 2.2E-05 23.1 3.4 25 971-995 3-27 (205)
175 d1nn5a_ c.37.1.1 (A:) Thymidyl 86.0 0.71 5.1E-05 20.4 5.3 31 972-1002 5-38 (209)
176 d2g9na1 c.37.1.19 (A:21-238) I 85.8 0.72 5.3E-05 20.3 9.5 58 928-988 8-67 (218)
177 d1ewqa2 c.37.1.12 (A:542-765) 85.5 0.74 5.4E-05 20.2 8.8 67 971-1039 36-124 (224)
178 d1moza_ c.37.1.8 (A:) ADP-ribo 85.2 0.49 3.5E-05 21.6 4.0 25 968-992 15-39 (182)
179 d1wmsa_ c.37.1.8 (A:) Rab9a {H 85.2 0.77 5.6E-05 20.1 6.0 23 971-993 7-29 (174)
180 d1rkba_ c.37.1.1 (A:) Adenylat 85.1 0.29 2.1E-05 23.3 2.9 33 466-500 4-36 (173)
181 d2i1qa2 c.37.1.11 (A:65-322) D 85.0 0.36 2.6E-05 22.6 3.3 26 969-994 33-58 (258)
182 d1u8za_ c.37.1.8 (A:) Ras-rela 84.5 0.82 6E-05 19.9 8.7 25 969-993 3-27 (168)
183 d1nrjb_ c.37.1.8 (B:) Signal r 84.3 0.84 6.1E-05 19.8 7.6 23 972-994 5-27 (209)
184 d2iyva1 c.37.1.2 (A:2-166) Shi 84.0 0.35 2.6E-05 22.6 2.9 33 466-500 1-33 (165)
185 d1gsia_ c.37.1.1 (A:) Thymidyl 84.0 0.86 6.3E-05 19.7 4.9 32 973-1004 3-37 (208)
186 d1kaoa_ c.37.1.8 (A:) Rap2a {H 83.8 0.88 6.4E-05 19.7 7.1 22 972-993 5-26 (167)
187 d1zp6a1 c.37.1.25 (A:6-181) Hy 83.5 0.29 2.1E-05 23.3 2.3 35 467-503 5-39 (176)
188 d1vhta_ c.37.1.1 (A:) Dephosph 83.5 0.5 3.6E-05 21.5 3.5 30 972-1002 5-34 (208)
189 d1jjva_ c.37.1.1 (A:) Dephosph 82.8 0.48 3.5E-05 21.6 3.2 29 973-1002 5-33 (205)
190 d2bmfa2 c.37.1.14 (A:178-482) 82.6 0.86 6.2E-05 19.7 4.4 35 464-499 7-44 (305)
191 d1s2ma1 c.37.1.19 (A:46-251) P 82.5 0.97 7.1E-05 19.3 6.8 52 933-987 2-55 (206)
192 d1ihua1 c.37.1.10 (A:1-296) Ar 82.3 0.99 7.2E-05 19.3 5.6 35 969-1003 7-44 (296)
193 d2vp4a1 c.37.1.1 (A:12-208) De 81.9 0.43 3.1E-05 22.0 2.7 31 969-999 8-38 (197)
194 d2qm8a1 c.37.1.10 (A:5-327) Me 81.9 1 7.5E-05 19.2 7.5 37 970-1006 51-92 (323)
195 d1kaga_ c.37.1.2 (A:) Shikimat 81.6 0.43 3.2E-05 21.9 2.6 33 467-501 3-35 (169)
196 d1zcba2 c.37.1.8 (A:47-75,A:20 81.4 1.1 7.8E-05 19.0 4.9 34 971-1004 3-42 (200)
197 d2ocpa1 c.37.1.1 (A:37-277) De 81.2 1.1 7.9E-05 19.0 4.5 30 970-999 2-31 (241)
198 d1q0ua_ c.37.1.19 (A:) Probabl 80.4 1.1 8.4E-05 18.8 7.1 16 971-986 39-54 (209)
199 d1a7ja_ c.37.1.6 (A:) Phosphor 80.2 0.64 4.6E-05 20.7 3.0 35 972-1006 6-43 (288)
200 d1viaa_ c.37.1.2 (A:) Shikimat 79.7 0.59 4.3E-05 21.0 2.8 33 467-501 1-33 (161)
201 d1zj6a1 c.37.1.8 (A:2-178) ADP 79.7 1.2 8.7E-05 18.7 8.8 23 971-993 16-38 (177)
202 d1tmka_ c.37.1.1 (A:) Thymidyl 79.5 1.2 8.8E-05 18.6 4.7 33 971-1003 4-36 (214)
203 d2qtvb1 c.37.1.8 (B:24-189) SA 79.1 0.88 6.4E-05 19.6 3.5 22 972-993 2-23 (166)
204 d1u0la2 c.37.1.8 (A:69-293) Pr 79.1 0.95 6.9E-05 19.4 3.6 32 971-1002 96-127 (225)
205 d4tmka_ c.37.1.1 (A:) Thymidyl 78.5 0.83 6.1E-05 19.8 3.2 31 971-1001 3-36 (210)
206 d1r0wa_ c.37.1.12 (A:) Cystic 78.4 0.96 7E-05 19.4 3.5 26 969-994 61-86 (281)
207 d1veca_ c.37.1.19 (A:) DEAD bo 78.4 1.3 9.5E-05 18.4 9.2 16 971-986 41-56 (206)
208 d1qdea_ c.37.1.19 (A:) Initiat 78.1 1.3 9.7E-05 18.3 11.8 58 927-987 5-64 (212)
209 d1knqa_ c.37.1.17 (A:) Glucona 78.1 0.75 5.4E-05 20.2 2.9 34 466-501 6-39 (171)
210 d2gnoa2 c.37.1.20 (A:11-208) g 78.0 1.3 9.7E-05 18.3 4.1 58 676-736 63-121 (198)
211 d3b60a1 c.37.1.12 (A:329-581) 77.9 0.79 5.8E-05 20.0 3.0 26 969-994 40-65 (253)
212 d1deka_ c.37.1.1 (A:) Deoxynuc 77.7 0.8 5.8E-05 20.0 2.9 32 971-1004 2-33 (241)
213 d1f6ba_ c.37.1.8 (A:) SAR1 {Ch 77.7 0.93 6.8E-05 19.5 3.3 22 971-992 14-35 (186)
214 d1g2912 c.37.1.12 (1:1-240) Ma 77.6 0.87 6.3E-05 19.7 3.1 24 971-994 30-53 (240)
215 d2awna2 c.37.1.12 (A:4-235) Ma 77.3 1.2 8.4E-05 18.8 3.7 24 971-994 27-50 (232)
216 d1upta_ c.37.1.8 (A:) ADP-ribo 77.3 0.97 7E-05 19.4 3.3 23 971-993 6-28 (169)
217 d1l2ta_ c.37.1.12 (A:) MJ0796 77.3 0.71 5.2E-05 20.4 2.6 24 971-994 32-55 (230)
218 d2onka1 c.37.1.12 (A:1-240) Mo 77.1 0.9 6.6E-05 19.6 3.1 24 972-995 26-49 (240)
219 d2gjsa1 c.37.1.8 (A:91-258) Ra 77.0 1.4 0.0001 18.1 7.2 21 972-992 3-23 (168)
220 d1z0fa1 c.37.1.8 (A:8-173) Rab 76.8 1 7.4E-05 19.2 3.3 22 972-993 6-27 (166)
221 d1jj7a_ c.37.1.12 (A:) Peptide 76.6 0.99 7.2E-05 19.3 3.2 26 969-994 39-64 (251)
222 d1e6ca_ c.37.1.2 (A:) Shikimat 76.2 0.95 6.9E-05 19.4 3.0 33 466-500 2-34 (170)
223 d1mv5a_ c.37.1.12 (A:) Multidr 76.0 1 7.4E-05 19.2 3.1 24 971-994 29-52 (242)
224 d3raba_ c.37.1.8 (A:) Rab3a {R 76.0 1.1 8E-05 18.9 3.3 22 972-993 7-28 (169)
225 d3dhwc1 c.37.1.12 (C:1-240) Me 76.0 0.75 5.4E-05 20.2 2.4 24 971-994 32-55 (240)
226 d1z2aa1 c.37.1.8 (A:8-171) Rab 75.8 1.1 8.2E-05 18.9 3.3 22 972-993 4-25 (164)
227 d1v43a3 c.37.1.12 (A:7-245) Hy 75.4 1.1 7.8E-05 19.0 3.1 25 971-995 33-57 (239)
228 d1r2qa_ c.37.1.8 (A:) Rab5a {H 75.4 1.2 8.5E-05 18.7 3.3 23 972-994 8-30 (170)
229 d3d31a2 c.37.1.12 (A:1-229) Su 75.4 0.87 6.4E-05 19.7 2.6 25 971-995 27-51 (229)
230 d1r8sa_ c.37.1.8 (A:) ADP-ribo 75.3 1.6 0.00011 17.8 11.0 23 972-994 2-24 (160)
231 d2f9la1 c.37.1.8 (A:8-182) Rab 75.2 1.2 8.7E-05 18.7 3.3 22 972-993 6-27 (175)
232 d2ew1a1 c.37.1.8 (A:4-174) Rab 74.9 1.1 8.2E-05 18.8 3.1 22 972-993 7-28 (171)
233 d2atva1 c.37.1.8 (A:5-172) Ras 74.9 1.2 8.8E-05 18.6 3.2 23 972-994 4-26 (168)
234 d2bdta1 c.37.1.25 (A:1-176) Hy 74.4 1.3 9.8E-05 18.3 3.3 28 467-496 3-30 (176)
235 d1z08a1 c.37.1.8 (A:17-183) Ra 73.9 1.3 9.5E-05 18.4 3.2 22 972-993 5-26 (167)
236 d1ky3a_ c.37.1.8 (A:) Rab-rela 73.7 1.7 0.00012 17.5 7.4 21 972-992 4-24 (175)
237 d2erya1 c.37.1.8 (A:10-180) r- 73.5 1.3 9.2E-05 18.5 3.0 22 972-993 7-28 (171)
238 d1b0ua_ c.37.1.12 (A:) ATP-bin 73.5 1 7.3E-05 19.2 2.5 24 971-994 29-52 (258)
239 d2bv3a2 c.37.1.8 (A:7-282) Elo 73.2 1.8 0.00013 17.4 9.3 24 971-994 7-30 (276)
240 d2fn4a1 c.37.1.8 (A:24-196) r- 73.2 1.3 9.5E-05 18.4 3.0 23 971-993 7-29 (173)
241 d1sgwa_ c.37.1.12 (A:) Putativ 73.1 1 7.6E-05 19.1 2.5 24 971-994 28-51 (200)
242 d1byia_ c.37.1.10 (A:) Dethiob 73.0 1.8 0.00013 17.4 4.7 33 971-1003 2-38 (224)
243 d1vg8a_ c.37.1.8 (A:) Rab7 {Ra 73.0 1.4 0.0001 18.1 3.2 22 972-993 4-25 (184)
244 d1svia_ c.37.1.8 (A:) Probable 72.9 1.8 0.00013 17.4 3.7 22 971-992 24-45 (195)
245 d1oxxk2 c.37.1.12 (K:1-242) Gl 72.6 1.1 7.9E-05 19.0 2.5 24 971-994 32-55 (242)
246 d1zina1 c.37.1.1 (A:1-125,A:16 72.5 1.5 0.00011 18.0 3.2 31 468-500 2-32 (182)
247 d2g6ba1 c.37.1.8 (A:58-227) Ra 72.3 1.6 0.00011 17.8 3.3 22 972-993 8-29 (170)
248 d2j0sa1 c.37.1.19 (A:22-243) P 72.2 1.8 0.00013 17.3 11.2 53 931-986 16-70 (222)
249 d2cxxa1 c.37.1.8 (A:2-185) GTP 71.9 1.4 0.0001 18.1 3.0 22 972-993 2-23 (184)
250 d1x3sa1 c.37.1.8 (A:2-178) Rab 71.5 1.6 0.00012 17.6 3.3 23 971-993 8-30 (177)
251 d2bmea1 c.37.1.8 (A:6-179) Rab 71.4 1.5 0.00011 17.9 3.1 22 972-993 7-28 (174)
252 d1kmqa_ c.37.1.8 (A:) RhoA {Hu 71.4 1.5 0.00011 17.8 3.1 24 971-994 3-26 (177)
253 d1xtqa1 c.37.1.8 (A:3-169) GTP 71.4 1.5 0.00011 17.8 3.1 23 971-993 5-27 (167)
254 d2erxa1 c.37.1.8 (A:6-176) di- 71.3 1.5 0.00011 17.8 3.1 22 972-993 4-25 (171)
255 d1yzqa1 c.37.1.8 (A:14-177) Ra 71.3 1.6 0.00011 17.8 3.1 22 972-993 2-23 (164)
256 d1g16a_ c.37.1.8 (A:) Rab-rela 71.1 1.6 0.00011 17.8 3.1 22 972-993 4-25 (166)
257 d1xzpa2 c.37.1.8 (A:212-371) T 70.8 2 0.00014 17.0 5.8 23 972-994 2-24 (160)
258 d1c1ya_ c.37.1.8 (A:) Rap1A {H 70.6 1.8 0.00013 17.4 3.3 23 972-994 5-27 (167)
259 d1zaka1 c.37.1.1 (A:3-127,A:15 70.5 1.4 0.0001 18.1 2.8 30 466-497 3-32 (189)
260 d1mh1a_ c.37.1.8 (A:) Rac {Hum 70.1 1.8 0.00013 17.3 3.3 24 971-994 6-29 (183)
261 d1ek0a_ c.37.1.8 (A:) Ypt51 {B 70.1 1.8 0.00013 17.3 3.3 23 971-993 4-26 (170)
262 d2bcgy1 c.37.1.8 (Y:3-196) GTP 70.1 1.7 0.00012 17.5 3.1 22 972-993 8-29 (194)
263 d1m7ba_ c.37.1.8 (A:) RhoE (RN 69.9 1.7 0.00013 17.5 3.1 23 971-993 3-25 (179)
264 d1p6xa_ c.37.1.1 (A:) Thymidin 69.9 1.5 0.00011 17.9 2.7 23 972-994 8-30 (333)
265 d1z0ja1 c.37.1.8 (A:2-168) Rab 69.7 1.9 0.00014 17.2 3.2 22 972-993 6-27 (167)
266 d2g3ya1 c.37.1.8 (A:73-244) GT 69.1 1.8 0.00013 17.3 3.1 21 972-992 5-25 (172)
267 d1x1ra1 c.37.1.8 (A:10-178) Ra 68.7 2.2 0.00016 16.7 3.5 25 969-993 3-27 (169)
268 d2b8ta1 c.37.1.24 (A:11-149) T 68.7 2.2 0.00016 16.7 6.6 68 973-1041 5-91 (139)
269 d1x6va3 c.37.1.4 (A:34-228) Ad 68.1 0.66 4.8E-05 20.6 0.6 33 466-500 19-51 (195)
270 g1f2t.1 c.37.1.12 (A:,B:) Rad5 67.8 2.2 0.00016 16.8 3.2 62 1022-1102 218-279 (292)
271 d1m8pa3 c.37.1.15 (A:391-573) 67.6 0.8 5.8E-05 20.0 1.0 27 468-496 8-34 (183)
272 d2ngra_ c.37.1.8 (A:) CDC42 {H 67.5 2.1 0.00015 16.9 3.1 23 972-994 5-27 (191)
273 d1p5zb_ c.37.1.1 (B:) Deoxycyt 67.2 0.69 5.1E-05 20.4 0.6 27 971-997 3-29 (241)
274 d2atxa1 c.37.1.8 (A:9-193) Rho 66.8 1.7 0.00012 17.5 2.5 26 968-993 7-32 (185)
275 d2f7sa1 c.37.1.8 (A:5-190) Rab 66.0 2.4 0.00018 16.4 10.0 22 972-993 7-28 (186)
276 d1xpua3 c.37.1.11 (A:129-417) 65.8 2.5 0.00018 16.3 6.7 24 971-994 44-67 (289)
277 d1mkya1 c.37.1.8 (A:2-172) Pro 65.6 2.5 0.00018 16.3 10.1 21 972-992 2-22 (171)
278 d1egaa1 c.37.1.8 (A:4-182) GTP 65.0 2.2 0.00016 16.7 2.8 24 970-993 5-28 (179)
279 d2eyqa3 c.37.1.19 (A:546-778) 64.6 2.6 0.00019 16.2 6.7 35 971-1005 77-114 (233)
280 d1ji0a_ c.37.1.12 (A:) Branche 64.5 2.1 0.00015 16.9 2.6 36 971-1006 33-70 (240)
281 g1xew.1 c.37.1.12 (X:,Y:) Smc 64.3 2 0.00014 17.0 2.5 21 468-490 28-48 (329)
282 d2fu5c1 c.37.1.8 (C:3-175) Rab 63.1 1.5 0.00011 18.0 1.6 21 972-992 8-28 (173)
283 d1wp9a1 c.37.1.19 (A:1-200) pu 63.1 2.7 0.0002 16.0 11.2 33 971-1003 24-60 (200)
284 d1g6ha_ c.37.1.12 (A:) MJ1267 61.9 2.4 0.00018 16.4 2.6 23 972-994 32-54 (254)
285 d1ihua2 c.37.1.10 (A:308-586) 60.4 3 0.00022 15.6 4.9 34 971-1004 21-57 (279)
286 d1i2ma_ c.37.1.8 (A:) Ran {Hum 60.0 1.4 0.0001 18.1 1.1 22 972-993 5-26 (170)
287 d1vpla_ c.37.1.12 (A:) Putativ 59.4 3.1 0.00023 15.5 3.1 25 971-995 29-53 (238)
288 d1z06a1 c.37.1.8 (A:32-196) Ra 59.2 3.2 0.00023 15.5 9.2 22 972-993 4-25 (165)
289 d2bcjq2 c.37.1.8 (Q:38-66,Q:18 58.2 3.3 0.00024 15.4 6.4 24 971-994 3-26 (200)
290 d1l7vc_ c.37.1.12 (C:) ABC tra 56.9 2.6 0.00019 16.2 2.0 22 971-992 26-47 (231)
291 d1lnza2 c.37.1.8 (A:158-342) O 56.8 2.9 0.00021 15.8 2.2 21 972-992 3-23 (185)
292 d1osna_ c.37.1.1 (A:) Thymidin 56.4 2.7 0.0002 16.0 2.0 26 971-996 6-31 (331)
293 d1udxa2 c.37.1.8 (A:157-336) O 56.2 2.8 0.0002 16.0 2.0 21 972-992 3-23 (180)
294 d2bmja1 c.37.1.8 (A:66-240) Ce 55.6 3.6 0.00026 15.1 3.4 26 969-994 4-29 (175)
295 d1svsa1 c.37.1.8 (A:32-60,A:18 55.3 3.6 0.00027 15.1 6.3 23 971-993 3-25 (195)
296 d1t9ha2 c.37.1.8 (A:68-298) Pr 54.8 1.1 8.3E-05 18.8 -0.1 32 971-1002 98-129 (231)
297 d1t6na_ c.37.1.19 (A:) Spliceo 54.2 3.8 0.00028 14.9 11.4 17 971-987 39-55 (207)
298 d1mkya2 c.37.1.8 (A:173-358) P 53.8 3.8 0.00028 14.9 3.1 23 971-993 9-31 (186)
299 d1e2ka_ c.37.1.1 (A:) Thymidin 53.0 3.4 0.00025 15.3 2.1 26 971-996 5-30 (329)
300 d1cp2a_ c.37.1.10 (A:) Nitroge 52.2 4.1 0.0003 14.7 5.0 34 971-1004 2-38 (269)
301 d1puia_ c.37.1.8 (A:) Probable 52.1 2.8 0.0002 16.0 1.5 22 971-992 17-38 (188)
302 d1nija1 c.37.1.10 (A:2-223) Hy 52.1 4.1 0.0003 14.7 3.1 26 969-994 2-27 (222)
303 d1j3ba1 c.91.1.1 (A:212-529) P 50.9 3.3 0.00024 15.4 1.7 21 479-500 194-214 (318)
304 d2olra1 c.91.1.1 (A:228-540) P 50.2 4.2 0.0003 14.6 2.1 16 788-803 182-197 (313)
305 d1w1wa_ c.37.1.12 (A:) Smc hea 49.4 4.4 0.00032 14.4 3.4 26 465-492 23-49 (427)
306 d1tq4a_ c.37.1.8 (A:) Interfer 48.9 4.5 0.00033 14.3 3.2 23 970-992 56-78 (400)
307 d2jdid3 c.37.1.11 (D:82-357) C 46.5 4.9 0.00036 14.1 10.4 24 971-994 69-92 (276)
308 d1gm5a3 c.37.1.19 (A:286-549) 46.3 4.9 0.00036 14.1 9.6 35 971-1005 105-142 (264)
309 d1ii2a1 c.91.1.1 (A:201-523) P 45.2 5.1 0.00037 14.0 2.1 14 470-485 18-31 (323)
310 d1lkxa_ c.37.1.9 (A:) Myosin S 45.2 5.1 0.00037 14.0 3.6 26 465-492 85-110 (684)
311 d1d0xa2 c.37.1.9 (A:2-33,A:80- 44.7 5.2 0.00038 13.9 3.6 27 464-492 123-149 (712)
312 g1ii8.1 c.37.1.12 (A:,B:) Rad5 43.6 5.4 0.00039 13.8 3.8 21 467-489 24-44 (369)
313 d2mysa2 c.37.1.9 (A:4-33,A:80- 42.0 5.7 0.00041 13.6 3.4 26 465-492 122-147 (794)
314 d1qhla_ c.37.1.12 (A:) Cell di 41.0 2.5 0.00018 16.3 -0.2 24 972-995 26-49 (222)
315 d2c78a3 c.37.1.8 (A:9-212) Elo 40.3 6 0.00044 13.4 6.8 27 968-994 1-27 (204)
316 d1e69a_ c.37.1.12 (A:) Smc hea 40.1 5.5 0.0004 13.7 1.5 49 1026-1089 238-286 (308)
317 d1br2a2 c.37.1.9 (A:80-789) My 39.2 6.2 0.00045 13.3 3.6 26 465-492 90-115 (710)
318 d1kk8a2 c.37.1.9 (A:1-28,A:77- 38.7 6.4 0.00046 13.2 3.6 27 465-493 120-146 (789)
319 g1qhh.1 c.37.1.19 (A:,B:,C:,D: 38.6 6.4 0.00046 13.2 3.2 34 468-501 216-249 (623)
320 d1w7ja2 c.37.1.9 (A:63-792) My 33.1 7.7 0.00056 12.6 3.6 26 465-492 93-118 (730)
321 d2afhe1 c.37.1.10 (E:1-289) Ni 33.1 7.7 0.00056 12.6 5.0 33 971-1003 3-38 (289)
322 d1z63a1 c.37.1.19 (A:432-661) 30.5 8.4 0.00061 12.3 6.8 71 971-1042 32-137 (230)
323 d1bg2a_ c.37.1.9 (A:) Kinesin 29.7 8.7 0.00063 12.2 2.5 17 971-987 77-93 (323)
324 d1ni3a1 c.37.1.8 (A:11-306) Yc 27.1 9.6 0.0007 11.9 1.5 34 971-1004 11-49 (296)
325 d1dm9a_ d.66.1.3 (A:) Heat sho 26.2 9.9 0.00072 11.8 4.5 35 189-226 28-63 (104)
326 d2jdia3 c.37.1.11 (A:95-379) C 24.4 11 0.00077 11.6 2.7 23 971-993 69-91 (285)
327 d1rifa_ c.37.1.23 (A:) DNA hel 24.1 11 0.00078 11.5 4.3 41 937-994 112-152 (282)
328 d1t5la1 c.37.1.19 (A:2-414) Nu 21.5 12 0.00088 11.2 6.5 31 972-1002 33-63 (413)
329 d1hyqa_ c.37.1.10 (A:) Cell di 20.7 12 0.00091 11.1 5.2 32 972-1003 3-38 (232)
No 1
>d1lv7a_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Escherichia coli [TaxId: 562]}
Probab=100.00 E-value=9.5e-40 Score=310.46 Aligned_cols=247 Identities=39% Similarity=0.597 Sum_probs=220.9
Q ss_pred CCCCCCCCHHCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCC
Q ss_conf 99987561000140999999999985725762566308988898249999589983999999999991995699611100
Q 000823 927 PSDIGVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSI 1006 (1267)
Q Consensus 927 ~~~~~vt~ddI~Gle~vk~~L~e~I~~pl~~~e~f~k~~~~kP~~gILL~GPpGTGKT~LAkAIA~elg~~vi~Id~seL 1006 (1267)
...+.++|+|++|+++++++|.+.+.+ +.+++.|.+.+.. +++++||+||||||||++|+++|++++.+++.++++++
T Consensus 4 ~~~~~~t~~Di~Gl~~~k~~l~e~v~~-~~~~~~~~~~g~~-~~~~iLL~GppGtGKT~la~~iA~~~~~~~~~i~~~~l 81 (256)
T d1lv7a_ 4 EDQIKTTFADVAGCDEAKEEVAELVEY-LREPSRFQKLGGK-IPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDF 81 (256)
T ss_dssp ECSSCCCGGGSCSCHHHHHHTHHHHHH-HHCGGGC-----C-CCCEEEEECCTTSCHHHHHHHHHHHHTCCEEEECSCSS
T ss_pred CCCCCCCHHHHHCHHHHHHHHHHHHHH-HHCHHHHHHCCCC-CCCEEEEECCCCCCCCHHHHHHHHHCCCCEEEEEHHHH
T ss_conf 889998999981639999999999999-8799999986999-88867866899888228999999982998799886994
Q ss_pred CHHCCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHCCCCCCC--HHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCC
Q ss_conf 0100275189999999998712991799935212213899984--37999999886554216886567776899994399
Q 000823 1007 TSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPG--EHEAMRKMKNEFMVNWDGLRTKDTERILVLAATNR 1084 (1267)
Q Consensus 1007 ~s~~~Ge~ek~I~~iF~~A~k~~PsIIiIDEID~L~~~r~~~~--~~~a~~~il~~LL~~ldgl~~~~~~~VlVIaTTN~ 1084 (1267)
.+.|+|++++.++.+|..|+.++||||||||||.++..|+... ......+++++|+..++++.. +.+++||||||.
T Consensus 82 ~~~~~g~~~~~l~~~f~~A~~~~P~il~iDeiD~l~~~r~~~~~~~~~~~~~~~~~ll~~~d~~~~--~~~v~vIatTn~ 159 (256)
T d1lv7a_ 82 VEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEG--NEGIIVIAATNR 159 (256)
T ss_dssp TTSCCCCCHHHHHHHHHHHHTTCSEEEEETTHHHHTCCCSTTSCCTTCHHHHHHHHHHHHHHTCCS--SSCEEEEEEESC
T ss_pred HHCCHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC--CCCEEEEEECCC
T ss_conf 260010789999999999997599899997756657567898888748999999999999538777--799899980799
Q ss_pred CCCCCHHHHH--CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999599982--03544369999988999999999830799990309999998279989999997764344777875333
Q 000823 1085 PFDLDEAVIR--RLPRRLMVNLPDAPNRAKILQVILAKEDLSPDVDFDAIANMTDGYSGSDLKVIFLSHSLICNVLLLNL 1162 (1267)
Q Consensus 1085 p~~Ld~aLlr--RFd~~I~v~~Pd~eeR~eILk~ll~k~~l~~didl~~LA~~TeGySg~DLk~LI~~a~li~~v~~~~~ 1162 (1267)
++.+|++++| ||+..|+|+.|+.++|.+||+.++.+..+..++++..+++.|+||+++||+
T Consensus 160 ~~~ld~al~R~gRfd~~i~i~~P~~~~R~~il~~~l~~~~~~~~~~~~~la~~t~G~s~adi~----------------- 222 (256)
T d1lv7a_ 160 PDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLAPDIDAAIIARGTPGFSGADLA----------------- 222 (256)
T ss_dssp TTTSCGGGGSTTSSCEEEECCCCCHHHHHHHHHHHHTTSCBCTTCCHHHHHHTCTTCCHHHHH-----------------
T ss_pred CCCCCHHHCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCHHHHH-----------------
T ss_conf 310798576898787798779959999999999842599868656999999868998999999-----------------
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC
Q ss_conf 45679999999999999999999999999989999988641999998779888766679999999998034
Q 000823 1163 WSDWLLVYLIVLQNLCVTAAHRPIKEILEKEKKERAAAMAEGKPAPALSGCADIRPLNMDDFKYAHERVCA 1233 (1267)
Q Consensus 1163 l~~~i~~~l~~l~~Lc~~Aa~~aire~l~~~k~~~~~a~~e~~~~~~~~~~~~~~~Vt~eDf~~Al~~v~p 1233 (1267)
++|++|+..++++ ....++++||++|++++..
T Consensus 223 -------------~l~~~A~~~a~~~--------------------------~~~~i~~~d~~~Al~rv~~ 254 (256)
T d1lv7a_ 223 -------------NLVNEAALFAARG--------------------------NKRVVSMVEFEKAKDKIMM 254 (256)
T ss_dssp -------------HHHHHHHHHHHHT--------------------------TCSSBCHHHHHHHHHHHTT
T ss_pred -------------HHHHHHHHHHHHC--------------------------CCCCCCHHHHHHHHHHHHC
T ss_conf -------------9999999999982--------------------------8983489999999999966
No 2
>d1ixza_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Thermus thermophilus [TaxId: 274]}
Probab=100.00 E-value=7.8e-39 Score=303.63 Aligned_cols=240 Identities=37% Similarity=0.580 Sum_probs=215.4
Q ss_pred CCCCCCHHCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCCCH
Q ss_conf 98756100014099999999998572576256630898889824999958998399999999999199569961110001
Q 000823 929 DIGVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITS 1008 (1267)
Q Consensus 929 ~~~vt~ddI~Gle~vk~~L~e~I~~pl~~~e~f~k~~~~kP~~gILL~GPpGTGKT~LAkAIA~elg~~vi~Id~seL~s 1008 (1267)
.++++|+|++|++++|+.|++.+.. +.+++.|.+.+. ++++++||+||||||||++|+++|++++++++.++++++.+
T Consensus 3 ~p~~~~~di~G~~~~k~~l~~~i~~-l~~~~~~~~~g~-~~~~giLl~GppGtGKT~la~aia~~~~~~~~~i~~~~l~~ 80 (247)
T d1ixza_ 3 APKVTFKDVAGAEEAKEELKEIVEF-LKNPSRFHEMGA-RIPKGVLLVGPPGVGKTHLARAVAGEARVPFITASGSDFVE 80 (247)
T ss_dssp CCSCCGGGCCSCHHHHHHHHHHHHH-HHCHHHHHHTTC-CCCSEEEEECCTTSSHHHHHHHHHHHTTCCEEEEEHHHHHH
T ss_pred CCCCCHHHHCCHHHHHHHHHHHHHH-HHCHHHHHHCCC-CCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEHHHHHH
T ss_conf 8997499971579999999999999-879999997599-98864887668988835999999987399779978699646
Q ss_pred HCCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHCCCCCCC--HHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCC
Q ss_conf 00275189999999998712991799935212213899984--3799999988655421688656777689999439999
Q 000823 1009 KWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPG--EHEAMRKMKNEFMVNWDGLRTKDTERILVLAATNRPF 1086 (1267)
Q Consensus 1009 ~~~Ge~ek~I~~iF~~A~k~~PsIIiIDEID~L~~~r~~~~--~~~a~~~il~~LL~~ldgl~~~~~~~VlVIaTTN~p~ 1086 (1267)
+|+|++++.++.+|..|+..+||||||||||.+++.+.... ......++++.|+..|+++.. +.+|+||+|||.++
T Consensus 81 ~~~g~~~~~l~~~f~~a~~~~p~Ii~iDeid~l~~~r~~~~~~~~~~~~~~~~~ll~~~d~~~~--~~~vivi~tTn~~~ 158 (247)
T d1ixza_ 81 MFVGVGAARVRDLFETAKRHAPCIVFIDEIDAVGRKRGSGVGGGNDEREQTLNQLLVEMDGFEK--DTAIVVMAATNRPD 158 (247)
T ss_dssp SCTTHHHHHHHHHHHHHTTSSSEEEEEETHHHHHC---------CHHHHHHHHHHHHHHHTCCT--TCCEEEEEEESCGG
T ss_pred CCCCHHHHHHHHHHHHHHHCCCEEEEEECHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC--CCCEEEEEECCCCC
T ss_conf 2453899999999999997699799997736647467899888758999999999999638777--89989998079940
Q ss_pred CCCHHHHH--CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99599982--0354436999998899999999983079999030999999827998999999776434477787533345
Q 000823 1087 DLDEAVIR--RLPRRLMVNLPDAPNRAKILQVILAKEDLSPDVDFDAIANMTDGYSGSDLKVIFLSHSLICNVLLLNLWS 1164 (1267)
Q Consensus 1087 ~Ld~aLlr--RFd~~I~v~~Pd~eeR~eILk~ll~k~~l~~didl~~LA~~TeGySg~DLk~LI~~a~li~~v~~~~~l~ 1164 (1267)
.+|++++| ||+.+|+|+.|+.++|.+||+.++.......++++..+++.|+||+++||+
T Consensus 159 ~ld~al~R~~Rf~~~i~~~~P~~~eR~~il~~~l~~~~~~~~~~~~~la~~t~g~s~~di~------------------- 219 (247)
T d1ixza_ 159 ILDPALLRPGRFDRQIAIDAPDVKGREQILRIHARGKPLAEDVDLALLAKRTPGFVGADLE------------------- 219 (247)
T ss_dssp GSCGGGGSTTSSCEEEECCSCCHHHHHHHHHHHHTTSCBCTTCCHHHHHHTCTTCCHHHHH-------------------
T ss_pred CCCHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCHHHHH-------------------
T ss_conf 0699675898785799979969999999999875065776546899999778898899999-------------------
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 6799999999999999999999999999899999886419999987798887666799999999
Q 000823 1165 DWLLVYLIVLQNLCVTAAHRPIKEILEKEKKERAAAMAEGKPAPALSGCADIRPLNMDDFKYAH 1228 (1267)
Q Consensus 1165 ~~i~~~l~~l~~Lc~~Aa~~aire~l~~~k~~~~~a~~e~~~~~~~~~~~~~~~Vt~eDf~~Al 1228 (1267)
++|++|+..++++ ....++++||++|+
T Consensus 220 -----------~lv~~A~l~a~~~--------------------------~~~~i~~~d~~~A~ 246 (247)
T d1ixza_ 220 -----------NLLNEAALLAARE--------------------------GRRKITMKDLEEAA 246 (247)
T ss_dssp -----------HHHHHHHHHHHHT--------------------------TCSSBCHHHHHHHT
T ss_pred -----------HHHHHHHHHHHHC--------------------------CCCCCCHHHHHHHH
T ss_conf -----------9999999999986--------------------------88874999999864
No 3
>d1e32a2 c.37.1.20 (A:201-458) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00 E-value=1.6e-38 Score=301.30 Aligned_cols=255 Identities=39% Similarity=0.650 Sum_probs=217.5
Q ss_pred CCCHHCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCCCHHCC
Q ss_conf 56100014099999999998572576256630898889824999958998399999999999199569961110001002
Q 000823 932 VTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWF 1011 (1267)
Q Consensus 932 vt~ddI~Gle~vk~~L~e~I~~pl~~~e~f~k~~~~kP~~gILL~GPpGTGKT~LAkAIA~elg~~vi~Id~seL~s~~~ 1011 (1267)
++|+|++|++++|++|++.+..|+.+++.|.+.+.. +++++|||||||||||++++++|++++.+++.++++++.+.+.
T Consensus 1 ~~~~dv~G~~~~k~~l~~~i~~~l~~~~~~~~~g~~-~~~giLL~GppGtGKT~l~~ala~~~~~~~~~i~~~~l~~~~~ 79 (258)
T d1e32a2 1 VGYDDVGGCRKQLAQIKEMVELPLRHPALFKAIGVK-PPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLA 79 (258)
T ss_dssp CCGGGCCSCSHHHHHHHHHHHHHHHCHHHHHHCCCC-CCCEEEEECCTTSSHHHHHHHHHHHTTCEEEEECHHHHTTSCT
T ss_pred CCHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHCCCC-CCCEEEEECCCCCCCHHHHHHHHHHHCCEEEEEECHHHCCCCC
T ss_conf 976663109999999999999883199999867999-8864687669988830899999987488379997304302545
Q ss_pred CCCHHHHHHHHHHHHHCCCEEEEECCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCHH
Q ss_conf 75189999999998712991799935212213899984379999998865542168865677768999943999999599
Q 000823 1012 GEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDTERILVLAATNRPFDLDEA 1091 (1267)
Q Consensus 1012 Ge~ek~I~~iF~~A~k~~PsIIiIDEID~L~~~r~~~~~~~a~~~il~~LL~~ldgl~~~~~~~VlVIaTTN~p~~Ld~a 1091 (1267)
|..+..++.+|..|+..+||||||||+|.+++++... ..+...++++.++..+++... ..+|+||+|||.++.+|++
T Consensus 80 g~~~~~l~~~f~~A~~~~p~il~iDeid~l~~~r~~~-~~~~~~~~~~~~~~~~~~~~~--~~~vlvi~tTn~~~~ld~a 156 (258)
T d1e32a2 80 GESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKT-HGEVERRIVSQLLTLMDGLKQ--RAHVIVMAATNRPNSIDPA 156 (258)
T ss_dssp THHHHHHHHHHHHHHHTCSEEEEESSGGGTCCHHHHC-CCTTHHHHHHHHHHHHHTCCC--SSCEEEEEEESCGGGSCGG
T ss_pred CCHHHHHHHHHHHHHHCCCEEEEEHHHHHHCCCCCCC-CCCHHHHHHHHHCCCCCCCCC--CCCCCEEEECCCCCCCCHH
T ss_conf 6178888999999986499499852111322578877-770689998775001101234--6881179757993102524
Q ss_pred HHH--CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 982--035443699999889999999998307999903099999982799899999977643447778753334567999
Q 000823 1092 VIR--RLPRRLMVNLPDAPNRAKILQVILAKEDLSPDVDFDAIANMTDGYSGSDLKVIFLSHSLICNVLLLNLWSDWLLV 1169 (1267)
Q Consensus 1092 Llr--RFd~~I~v~~Pd~eeR~eILk~ll~k~~l~~didl~~LA~~TeGySg~DLk~LI~~a~li~~v~~~~~l~~~i~~ 1169 (1267)
++| ||++.|+|++|+.++|.+||+.++.+..+..++++..||.+|+||+++||+
T Consensus 157 l~r~gRfd~~i~~~~P~~~~R~~il~~~l~~~~~~~~~~~~~la~~t~G~s~adl~------------------------ 212 (258)
T d1e32a2 157 LRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLA------------------------ 212 (258)
T ss_dssp GTSTTSSCEEEECCCCCHHHHHHHHHHTTTTSCBCTTCCHHHHHHHCTTCCHHHHH------------------------
T ss_pred HHHCCCCCCEEECCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCHHHHH------------------------
T ss_conf 54246302323789999889998732204576334553034444206677899999------------------------
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC-CCCCCCCCCCHHHHHHHHHH
Q ss_conf 99999999999999999999999899999886419999987-79888766679999999998
Q 000823 1170 YLIVLQNLCVTAAHRPIKEILEKEKKERAAAMAEGKPAPAL-SGCADIRPLNMDDFKYAHER 1230 (1267)
Q Consensus 1170 ~l~~l~~Lc~~Aa~~aire~l~~~k~~~~~a~~e~~~~~~~-~~~~~~~~Vt~eDf~~Al~~ 1230 (1267)
++|++|+..++++....... +. ... .......+++|+||+.|+.+
T Consensus 213 ------~lv~~A~~~a~~~~~~~~~~-------~~---~~~~~~~~~~~~it~~Df~~AL~~ 258 (258)
T d1e32a2 213 ------ALCSEAALQAIRKKMDLIDL-------ED---ETIDAEVMNSLAVTMDDFRWALSQ 258 (258)
T ss_dssp ------HHHHHHHHHHHHHHHHHHCC-------CS---SCCBHHHHHHCCBCHHHHHHHHTC
T ss_pred ------HHHHHHHHHHHHHHCCCCCH-------HH---HHHHHHHHCCCCCCHHHHHHHHCC
T ss_conf ------99999999999850433452-------25---442156514686689999999676
No 4
>d1r7ra3 c.37.1.20 (A:471-735) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00 E-value=1.7e-36 Score=286.13 Aligned_cols=258 Identities=38% Similarity=0.654 Sum_probs=219.6
Q ss_pred CCCCCHHCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCCCHH
Q ss_conf 87561000140999999999985725762566308988898249999589983999999999991995699611100010
Q 000823 930 IGVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSK 1009 (1267)
Q Consensus 930 ~~vt~ddI~Gle~vk~~L~e~I~~pl~~~e~f~k~~~~kP~~gILL~GPpGTGKT~LAkAIA~elg~~vi~Id~seL~s~ 1009 (1267)
+.++|+|++|+++++++|.+.+..++.+++.|.+.+. .+++++||+||||||||++|+++|.+++.+|+.++++++.+.
T Consensus 2 p~~~f~di~G~~~~k~~l~~~i~~~l~~~~~~~~~g~-~~~~giLL~Gp~GtGKT~l~~ala~~~~~~~~~~~~~~l~~~ 80 (265)
T d1r7ra3 2 PQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGM-TPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTM 80 (265)
T ss_dssp CCCSCSSCSSSSCCCCHHHHHTHHHHHCHHHHHHCCC-CCCCEEEEBCCTTSSHHHHHHHHHHHTTCEEEEECHHHHHTS
T ss_pred CCCCHHHHCCHHHHHHHHHHHHHHHHHCHHHHHHCCC-CCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEHHHHHHC
T ss_conf 9998999667899999999999999639999986799-988757887899876304778878771894799887995253
Q ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHCCCCC--CCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCC
Q ss_conf 02751899999999987129917999352122138999--8437999999886554216886567776899994399999
Q 000823 1010 WFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRREN--PGEHEAMRKMKNEFMVNWDGLRTKDTERILVLAATNRPFD 1087 (1267)
Q Consensus 1010 ~~Ge~ek~I~~iF~~A~k~~PsIIiIDEID~L~~~r~~--~~~~~a~~~il~~LL~~ldgl~~~~~~~VlVIaTTN~p~~ 1087 (1267)
+.|..+..++.+|..|+...||||||||+|.++..+.. ........++++.|+..++++.. ..+++||||||.++.
T Consensus 81 ~~~~~~~~l~~~f~~A~~~~p~il~ideid~l~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~--~~~v~vi~ttn~~~~ 158 (265)
T d1r7ra3 81 WFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMST--KKNVFIIGATNRPDI 158 (265)
T ss_dssp CTTTHHHHHHHHHHHHHHTCSEEEEESSGGGTCCHHHHCCCTTHHHHHHHHHHHHHTCC--------CCEEEECCBSCTT
T ss_pred CCCCHHHHHHHHHHHHHHCCCCCEEHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC--CCCEEEEEECCCCHH
T ss_conf 165158999999999986398435687546324557876788737999999999999628677--799899991799222
Q ss_pred CCHHHHH--CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9599982--03544369999988999999999830799990309999998279989999997764344777875333456
Q 000823 1088 LDEAVIR--RLPRRLMVNLPDAPNRAKILQVILAKEDLSPDVDFDAIANMTDGYSGSDLKVIFLSHSLICNVLLLNLWSD 1165 (1267)
Q Consensus 1088 Ld~aLlr--RFd~~I~v~~Pd~eeR~eILk~ll~k~~l~~didl~~LA~~TeGySg~DLk~LI~~a~li~~v~~~~~l~~ 1165 (1267)
+|++++| ||+.+|+|+.|+.++|.+||+.++.+.....++++..|+.+|+||+++||.
T Consensus 159 ld~al~r~gRf~~~i~~~~p~~~~R~~il~~~l~~~~~~~~~~l~~la~~t~g~s~~di~-------------------- 218 (265)
T d1r7ra3 159 IDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLT-------------------- 218 (265)
T ss_dssp TSCGGGSSTTSEEEEECCCCCCHHHHHHHHHHTTCC----CCCCHHHHHHHCSSCCHHHH--------------------
T ss_pred CCHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHH--------------------
T ss_conf 799780787764799956607888999999996057710243689998258999999999--------------------
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 79999999999999999999999999989999988641999998779888766679999999998
Q 000823 1166 WLLVYLIVLQNLCVTAAHRPIKEILEKEKKERAAAMAEGKPAPALSGCADIRPLNMDDFKYAHER 1230 (1267)
Q Consensus 1166 ~i~~~l~~l~~Lc~~Aa~~aire~l~~~k~~~~~a~~e~~~~~~~~~~~~~~~Vt~eDf~~Al~~ 1230 (1267)
++|++|...++++.+.......... ........++.+||..++++
T Consensus 219 ----------~lv~~A~~~A~~~~~~~~~~~~~~~----------~~~~~~~~~~~~d~v~~i~~ 263 (265)
T d1r7ra3 219 ----------EICQRACKLAIRESIESEIRRERER----------QTNPSAMEVEEDDPVPEIRR 263 (265)
T ss_dssp ----------HHHHHHHHHHHHHC----------------------------------CHHHHHH
T ss_pred ----------HHHHHHHHHHHHHHHHHHHHHHHHH----------CCCCCCCCCCCCCCHHHHCC
T ss_conf ----------9999999999998999899999986----------23840154553666287726
No 5
>d1d2na_ c.37.1.20 (A:) Hexamerization domain of N-ethylmalemide-sensitive fusion (NSF) protein {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=99.91 E-value=4.2e-25 Score=201.13 Aligned_cols=176 Identities=22% Similarity=0.299 Sum_probs=135.6
Q ss_pred CCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCCCHHCCCCC-HHHHHHHHHHHHHCCCEEEEECCCHHHHCCC
Q ss_conf 889824999958998399999999999199569961110001002751-8999999999871299179993521221389
Q 000823 967 TKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEG-EKYVKAVFSLASKIAPSVIFVDEVDSMLGRR 1045 (1267)
Q Consensus 967 ~kP~~gILL~GPpGTGKT~LAkAIA~elg~~vi~Id~seL~s~~~Ge~-ek~I~~iF~~A~k~~PsIIiIDEID~L~~~r 1045 (1267)
..|++++||+||||||||++|+++|++++++|+.+++++++..+.+.. .+.++++|+.|++.+||||||||||.+++.+
T Consensus 37 ~~p~~~vLL~GppGtGKT~la~alA~~~~~~~~~i~~~~~~~g~~~~~~~~~i~~if~~A~~~~p~il~iDEid~l~~~~ 116 (246)
T d1d2na_ 37 RTPLVSVLLEGPPHSGKTALAAKIAEESNFPFIKICSPDKMIGFSETAKCQAMKKIFDDAYKSQLSCVVVDDIERLLDYV 116 (246)
T ss_dssp SCSEEEEEEECSTTSSHHHHHHHHHHHHTCSEEEEECGGGCTTCCHHHHHHHHHHHHHHHHTSSEEEEEECCHHHHTTCB
T ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHC
T ss_conf 89980799889699988999999862010023334565223565421122444445655553242223310256676513
Q ss_pred CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCHH-HHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
Q ss_conf 9984379999998865542168865677768999943999999599-982035443699999889999999998307999
Q 000823 1046 ENPGEHEAMRKMKNEFMVNWDGLRTKDTERILVLAATNRPFDLDEA-VIRRLPRRLMVNLPDAPNRAKILQVILAKEDLS 1124 (1267)
Q Consensus 1046 ~~~~~~~a~~~il~~LL~~ldgl~~~~~~~VlVIaTTN~p~~Ld~a-LlrRFd~~I~v~~Pd~eeR~eILk~ll~k~~l~ 1124 (1267)
.... ...+.+++.++..+++.... ..+|+||+|||+++.+++. +++||+..|++ |+..+|.+|++.+..... .
T Consensus 117 ~~~~--~~~~~~~~~ll~~l~~~~~~-~~~v~vi~tTn~~~~ld~~~~~~rF~~~i~~--P~~~~r~~il~~l~~~~~-~ 190 (246)
T d1d2na_ 117 PIGP--RFSNLVLQALLVLLKKAPPQ-GRKLLIIGTTSRKDVLQEMEMLNAFSTTIHV--PNIATGEQLLEALELLGN-F 190 (246)
T ss_dssp TTTT--BCCHHHHHHHHHHTTCCCST-TCEEEEEEEESCHHHHHHTTCTTTSSEEEEC--CCEEEHHHHHHHHHHHTC-S
T ss_pred CCCC--CHHHHHHHHHHHHHCCCCCC-CCCEEEEECCCCHHHCCCHHHCCCCCEEEEC--CCCHHHHHHHHHHHHCCC-C
T ss_conf 4544--12478999999986077765-4501455324883225610201866338855--991059999999974268-9
Q ss_pred CCCCHHHHHHHCCCCCHH-HHHHHH
Q ss_conf 903099999982799899-999977
Q 000823 1125 PDVDFDAIANMTDGYSGS-DLKVIF 1148 (1267)
Q Consensus 1125 ~didl~~LA~~TeGySg~-DLk~LI 1148 (1267)
.+.++..++..+.|+... .++.++
T Consensus 191 ~~~~~~~i~~~~~g~~~~~~ik~ll 215 (246)
T d1d2na_ 191 KDKERTTIAQQVKGKKVWIGIKKLL 215 (246)
T ss_dssp CHHHHHHHHHHHTTSEEEECHHHHH
T ss_pred CHHHHHHHHHHCCCCCCCHHHHHHH
T ss_conf 8688999999748995534199999
No 6
>d1ofha_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=99.90 E-value=2.7e-23 Score=187.73 Aligned_cols=182 Identities=24% Similarity=0.323 Sum_probs=146.2
Q ss_pred HCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCCC--HHCCCC
Q ss_conf 001409999999999857257625663089888982499995899839999999999919956996111000--100275
Q 000823 936 DIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSIT--SKWFGE 1013 (1267)
Q Consensus 936 dI~Gle~vk~~L~e~I~~pl~~~e~f~k~~~~kP~~gILL~GPpGTGKT~LAkAIA~elg~~vi~Id~seL~--s~~~Ge 1013 (1267)
.++|++++++.+...+..+.++...........|++++||+||||||||+||+++|+.++.+|+.++++++. +.+.|.
T Consensus 15 ~ViGQd~A~~~l~~av~~~~~r~~~~~~~~~~~~~~~iLl~GPpG~GKT~lAkalA~~~~~~~~~i~~s~~~~~~~~~~~ 94 (309)
T d1ofha_ 15 HIIGQADAKRAVAIALRNRWRRMQLQEPLRHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVGYVGKE 94 (309)
T ss_dssp TCCSCHHHHHHHHHHHHHHHHTTSSCHHHHHHCCCCCEEEECCTTSSHHHHHHHHHHHHTCCEEEEEGGGGSSCCSGGGS
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCHHCCCCCCCCCCEEEEEE
T ss_conf 13491999999999999898772457877667898669998999988889999986213221000344330101157641
Q ss_pred CHHHHHHHHHHHHHC-----CCEEEEECCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC------CCCEEEEEE-
Q ss_conf 189999999998712-----99179993521221389998437999999886554216886567------776899994-
Q 000823 1014 GEKYVKAVFSLASKI-----APSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKD------TERILVLAA- 1081 (1267)
Q Consensus 1014 ~ek~I~~iF~~A~k~-----~PsIIiIDEID~L~~~r~~~~~~~a~~~il~~LL~~ldgl~~~~------~~~VlVIaT- 1081 (1267)
.+..++.+|..|... +||||||||||.+.+.+.....+.....+++.|+..+++..... ..++++|++
T Consensus 95 ~~~~~~~~f~~a~~~~~~~~~~~IIf~DEIdki~~~~~~~~~~~~~~gv~~~LL~~~dg~~~~~~~~~i~~s~ilfi~~g 174 (309)
T d1ofha_ 95 VDSIIRDLTDSAGGAIDAVEQNGIVFIDEIDKICKKGEYSGADVSREGVQRDLLPLVEGSTVSTKHGMVKTDHILFIASG 174 (309)
T ss_dssp TTHHHHHHHHTTTTCHHHHHHHCEEEEECGGGGSCCSSCCSSHHHHHHHHHHHHHHHHCCEEEETTEEEECTTCEEEEEE
T ss_pred CCCCCCCCCHHHHCCCCCCCCCCEEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEECCCEEEECCCEEEEECC
T ss_conf 13333332123312320035785688424645403015764120125799875288619888558807974622687046
Q ss_pred ---CCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf ---399999959998203544369999988999999999
Q 000823 1082 ---TNRPFDLDEAVIRRLPRRLMVNLPDAPNRAKILQVI 1117 (1267)
Q Consensus 1082 ---TN~p~~Ld~aLlrRFd~~I~v~~Pd~eeR~eILk~l 1117 (1267)
++.+..++|+++.||+.++.|+.|+..++.+|++..
T Consensus 175 a~~~~~~~~~~p~l~~R~~~~i~~~~~~~~~~~~Il~~~ 213 (309)
T d1ofha_ 175 AFQVARPSDLIPELQGRLPIRVELTALSAADFERILTEP 213 (309)
T ss_dssp CCSSSCGGGSCHHHHHTCCEEEECCCCCHHHHHHHHHSS
T ss_pred CHHHCCCCCCHHHHHHHHHEEEECCCCCHHHHHHHHHHH
T ss_conf 122147200125443102003002578879999999888
No 7
>d1lv7a_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Escherichia coli [TaxId: 562]}
Probab=99.88 E-value=5e-21 Score=170.76 Aligned_cols=236 Identities=16% Similarity=0.233 Sum_probs=174.6
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC-CCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCEE
Q ss_conf 577432332233443430458999998876303687511-2123334689913640689705889999999985719909
Q 000823 418 LDGTNLQESFENFPYYLSENTKNVLIAASYIHLKHKDHA-KYTSELTTVNPRILLSGPAGSEIYQEMLAKALAHYFGAKL 496 (1267)
Q Consensus 418 ~~~~~~~vsf~~FPYylse~tk~~L~~~~~~hL~~~~~~-~~~~~L~~~s~rILLsgp~GsE~Yqe~LaKALA~~f~a~L 496 (1267)
+...+++|||++.--. |.+|..|.+.+. .+++++.. +++. +.++.|||+|||| +++.+||||||++.+.++
T Consensus 2 ~~~~~~~~t~~Di~Gl--~~~k~~l~e~v~-~~~~~~~~~~~g~---~~~~~iLL~GppG--tGKT~la~~iA~~~~~~~ 73 (256)
T d1lv7a_ 2 LTEDQIKTTFADVAGC--DEAKEEVAELVE-YLREPSRFQKLGG---KIPKGVLMVGPPG--TGKTLLAKAIAGEAKVPF 73 (256)
T ss_dssp EEECSSCCCGGGSCSC--HHHHHHTHHHHH-HHHCGGGC--------CCCCEEEEECCTT--SCHHHHHHHHHHHHTCCE
T ss_pred CCCCCCCCCHHHHHCH--HHHHHHHHHHHH-HHHCHHHHHHCCC---CCCCEEEEECCCC--CCCCHHHHHHHHHCCCCE
T ss_conf 8888999899998163--999999999999-9879999998699---9888678668998--882289999999829987
Q ss_pred EEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99834565799862567652038864334465567997033431017888888999999999999999996545555544
Q 000823 497 LIFDSHSLLGGLSSKEAELLKDGTSAEKSCGCVKQGPTSTDLAKSINLPVSESDTPSSSNPPPQGPESQPKMETDTTLTS 576 (1267)
Q Consensus 497 L~lD~~~~~g~~~~~e~e~~~~~~~~e~~~~~~k~~~~~~~l~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~ 576 (1267)
+.++.+.|..
T Consensus 74 ~~i~~~~l~~---------------------------------------------------------------------- 83 (256)
T d1lv7a_ 74 FTISGSDFVE---------------------------------------------------------------------- 83 (256)
T ss_dssp EEECSCSSTT----------------------------------------------------------------------
T ss_pred EEEEHHHHHH----------------------------------------------------------------------
T ss_conf 9988699426----------------------------------------------------------------------
Q ss_pred CCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 46655523446772578326899999989999999987777166741149998621002489999787898777886621
Q 000823 577 AGTSKNHMLRIGDRVRFVGSTSGGLYPTASPTRGPPCGTRGKVALLFEDNPSSKIGVRFDKPIPDGVDLGGQCEGGHGFF 656 (1267)
Q Consensus 577 ~~~s~~~~~~~gdrvk~~g~~~~~~~~~~~~~r~~~~g~~g~v~~~~e~n~s~kvgV~Fd~~~~~~~~l~~~c~~~~~ff 656 (1267)
+
T Consensus 84 ---------------~---------------------------------------------------------------- 84 (256)
T d1lv7a_ 84 ---------------M---------------------------------------------------------------- 84 (256)
T ss_dssp ---------------S----------------------------------------------------------------
T ss_pred ---------------C----------------------------------------------------------------
T ss_conf ---------------0----------------------------------------------------------------
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHCC-------CCCHHH----HHHHHHHC--CCC
Q ss_conf 01354344688840147999999999986301479849997250434138-------942256----78998721--999
Q 000823 657 CNVTDLRLENSGTEDLDKLLINTLFEVVFSESRSCPFILFMKDAEKSIAG-------NSDSYS----TFKSRLEK--LPD 723 (1267)
Q Consensus 657 ~~~~~~~~~~~~~e~~~k~~i~~L~ev~~~~~~~~p~Ilfi~di~~~l~g-------~~~~~~----~lk~~L~~--l~g 723 (1267)
|+|+ .+..++.+|+.+.. ..|+||||||+|.++.. ..+... .|...++. ...
T Consensus 85 ----------~~g~--~~~~l~~~f~~A~~---~~P~il~iDeiD~l~~~r~~~~~~~~~~~~~~~~~ll~~~d~~~~~~ 149 (256)
T d1lv7a_ 85 ----------FVGV--GASRVRDMFEQAKK---AAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNE 149 (256)
T ss_dssp ----------CCCC--CHHHHHHHHHHHHT---TCSEEEEETTHHHHTCCCSTTSCCTTCHHHHHHHHHHHHHHTCCSSS
T ss_pred ----------CHHH--HHHHHHHHHHHHHH---CCCEEEEEECHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC
T ss_conf ----------0107--89999999999997---59989999775665756789888874899999999999953877779
Q ss_pred CEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCHHHHH
Q ss_conf 48999410357883345899986201347731111013578843443335787036788984208973997079878899
Q 000823 724 KVIVIGSHTHTDNRKEKSHPGGLLFTKFGSNQTALLDLAFPDSFGRLHDRGKEIPKATKLLTKLFPNKVTIHMPQDEALL 803 (1267)
Q Consensus 724 ~vvvIGs~~~~d~~~~~~~~~~~~l~~~g~~~~~l~d~a~~~~~~r~~~~~~~~~~~d~~l~rlFp~~IeI~LPdeE~RL 803 (1267)
+|+|||+||+++..|++ |+|||| |+.+|+|++|+.++|.
T Consensus 150 ~v~vIatTn~~~~ld~a-------l~R~gR----------------------------------fd~~i~i~~P~~~~R~ 188 (256)
T d1lv7a_ 150 GIIVIAATNRPDVLDPA-------LLRPGR----------------------------------FDRQVVVGLPDVRGRE 188 (256)
T ss_dssp CEEEEEEESCTTTSCGG-------GGSTTS----------------------------------SCEEEECCCCCHHHHH
T ss_pred CEEEEEECCCCCCCCHH-------HCCCCC----------------------------------CCEEEECCCCCHHHHH
T ss_conf 98999807993107985-------768987----------------------------------8779877995999999
Q ss_pred HHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 99998546556664202674068888652499876632310123344659999999999973320499999754322350
Q 000823 804 ASWKHQLDRDSETLKMKGNLNHLRTVLGRSGLECEGLETLCIRDQSLTNESAEKIVGWALSHHLMQNPEADPDARLVLSC 883 (1267)
Q Consensus 804 ~Ilk~qLek~~k~l~~~~Nv~~l~~vL~~~glsgaDLe~L~~~d~~ls~~aIe~iv~~A~s~~l~~~~~p~~~~kl~Is~ 883 (1267)
.||+..+.+ .....+++....+..+.||+|+||..+|.++ .-.|+ ...+..++.
T Consensus 189 ~il~~~l~~----~~~~~~~~~~~la~~t~G~s~adi~~l~~~A-----------~~~a~-----------~~~~~~i~~ 242 (256)
T d1lv7a_ 189 QILKVHMRR----VPLAPDIDAAIIARGTPGFSGADLANLVNEA-----------ALFAA-----------RGNKRVVSM 242 (256)
T ss_dssp HHHHHHHTT----SCBCTTCCHHHHHHTCTTCCHHHHHHHHHHH-----------HHHHH-----------HTTCSSBCH
T ss_pred HHHHHHCCC----CCCCCCCCHHHHHHHCCCCCHHHHHHHHHHH-----------HHHHH-----------HCCCCCCCH
T ss_conf 999984259----9868656999999868998999999999999-----------99999-----------828983489
Q ss_pred HHHHHHHHH
Q ss_conf 237778878
Q 000823 884 ESIQYGIGI 892 (1267)
Q Consensus 884 edl~~al~~ 892 (1267)
++|..++..
T Consensus 243 ~d~~~Al~r 251 (256)
T d1lv7a_ 243 VEFEKAKDK 251 (256)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
T ss_conf 999999999
No 8
>d1e32a2 c.37.1.20 (A:201-458) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.87 E-value=9.6e-21 Score=168.65 Aligned_cols=207 Identities=18% Similarity=0.293 Sum_probs=164.0
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC-CCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCEEEEEECCC
Q ss_conf 32233443430458999998876303687511-21233346899136406897058899999999857199099983456
Q 000823 425 ESFENFPYYLSENTKNVLIAASYIHLKHKDHA-KYTSELTTVNPRILLSGPAGSEIYQEMLAKALAHYFGAKLLIFDSHS 503 (1267)
Q Consensus 425 vsf~~FPYylse~tk~~L~~~~~~hL~~~~~~-~~~~~L~~~s~rILLsgp~GsE~Yqe~LaKALA~~f~a~LL~lD~~~ 503 (1267)
|+||+.-.+ |++|..|.+....+|+++++. +++ .+.++.|||+|||| .++.+||||+|++.+.+++.++.+.
T Consensus 1 ~~~~dv~G~--~~~k~~l~~~i~~~l~~~~~~~~~g---~~~~~giLL~GppG--tGKT~l~~ala~~~~~~~~~i~~~~ 73 (258)
T d1e32a2 1 VGYDDVGGC--RKQLAQIKEMVELPLRHPALFKAIG---VKPPRGILLYGPPG--TGKTLIARAVANETGAFFFLINGPE 73 (258)
T ss_dssp CCGGGCCSC--SHHHHHHHHHHHHHHHCHHHHHHCC---CCCCCEEEEECCTT--SSHHHHHHHHHHHTTCEEEEECHHH
T ss_pred CCHHHHCCH--HHHHHHHHHHHHHHHCCHHHHHHCC---CCCCCEEEEECCCC--CCCHHHHHHHHHHHCCEEEEEECHH
T ss_conf 976663109--9999999999998831999998679---99886468766998--8830899999987488379997304
Q ss_pred CCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 57998625676520388643344655679970334310178888889999999999999999965455555444665552
Q 000823 504 LLGGLSSKEAELLKDGTSAEKSCGCVKQGPTSTDLAKSINLPVSESDTPSSSNPPPQGPESQPKMETDTTLTSAGTSKNH 583 (1267)
Q Consensus 504 ~~g~~~~~e~e~~~~~~~~e~~~~~~k~~~~~~~l~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 583 (1267)
+..
T Consensus 74 l~~----------------------------------------------------------------------------- 76 (258)
T d1e32a2 74 IMS----------------------------------------------------------------------------- 76 (258)
T ss_dssp HTT-----------------------------------------------------------------------------
T ss_pred HCC-----------------------------------------------------------------------------
T ss_conf 302-----------------------------------------------------------------------------
Q ss_pred CCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 34467725783268999999899999999877771667411499986210024899997878987778866210135434
Q 000823 584 MLRIGDRVRFVGSTSGGLYPTASPTRGPPCGTRGKVALLFEDNPSSKIGVRFDKPIPDGVDLGGQCEGGHGFFCNVTDLR 663 (1267)
Q Consensus 584 ~~~~gdrvk~~g~~~~~~~~~~~~~r~~~~g~~g~v~~~~e~n~s~kvgV~Fd~~~~~~~~l~~~c~~~~~ff~~~~~~~ 663 (1267)
T Consensus 77 -------------------------------------------------------------------------------- 76 (258)
T d1e32a2 77 -------------------------------------------------------------------------------- 76 (258)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
T ss_conf --------------------------------------------------------------------------------
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHC----CCCCHHHHHHHHH------HCCCCCEEEEEECCC
Q ss_conf 468884014799999999998630147984999725043413----8942256789987------219994899941035
Q 000823 664 LENSGTEDLDKLLINTLFEVVFSESRSCPFILFMKDAEKSIA----GNSDSYSTFKSRL------EKLPDKVIVIGSHTH 733 (1267)
Q Consensus 664 ~~~~~~e~~~k~~i~~L~ev~~~~~~~~p~Ilfi~di~~~l~----g~~~~~~~lk~~L------~~l~g~vvvIGs~~~ 733 (1267)
+|+|+ ....+..+|+.+.. .+|+||||||+|.++. +..+....+...+ .....+|+|||+||+
T Consensus 77 --~~~g~--~~~~l~~~f~~A~~---~~p~il~iDeid~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvi~tTn~ 149 (258)
T d1e32a2 77 --KLAGE--SESNLRKAFEEAEK---NAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNR 149 (258)
T ss_dssp --SCTTH--HHHHHHHHHHHHHH---TCSEEEEESSGGGTCCHHHHCCCTTHHHHHHHHHHHHHTCCCSSCEEEEEEESC
T ss_pred --CCCCC--HHHHHHHHHHHHHH---CCCEEEEEHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEECCC
T ss_conf --54561--78888999999986---499499852111322578877770689998775001101234688117975799
Q ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHH
Q ss_conf 78833458999862013477311110135788434433357870367889842089739970798788999999854655
Q 000823 734 TDNRKEKSHPGGLLFTKFGSNQTALLDLAFPDSFGRLHDRGKEIPKATKLLTKLFPNKVTIHMPQDEALLASWKHQLDRD 813 (1267)
Q Consensus 734 ~d~~~~~~~~~~~~l~~~g~~~~~l~d~a~~~~~~r~~~~~~~~~~~d~~l~rlFp~~IeI~LPdeE~RL~Ilk~qLek~ 813 (1267)
++..|++ ++|||| |+.+|+|++|+.++|..||+..+..
T Consensus 150 ~~~ld~a-------l~r~gR----------------------------------fd~~i~~~~P~~~~R~~il~~~l~~- 187 (258)
T d1e32a2 150 PNSIDPA-------LRRFGR----------------------------------FDREVDIGIPDATGRLEILQIHTKN- 187 (258)
T ss_dssp GGGSCGG-------GTSTTS----------------------------------SCEEEECCCCCHHHHHHHHHHTTTT-
T ss_pred CCCCCHH-------HHHCCC----------------------------------CCCEEECCCCCHHHHHHHHHHHCCC-
T ss_conf 3102524-------542463----------------------------------0232378999988999873220457-
Q ss_pred HHHHHHCCCCHHHHHHHHHCCCCCCCCCCEECCC
Q ss_conf 6664202674068888652499876632310123
Q 000823 814 SETLKMKGNLNHLRTVLGRSGLECEGLETLCIRD 847 (1267)
Q Consensus 814 ~k~l~~~~Nv~~l~~vL~~~glsgaDLe~L~~~d 847 (1267)
.....+++....+..+.||+|+||..+|.++
T Consensus 188 ---~~~~~~~~~~~la~~t~G~s~adl~~lv~~A 218 (258)
T d1e32a2 188 ---MKLADDVDLEQVANETHGHVGADLAALCSEA 218 (258)
T ss_dssp ---SCBCTTCCHHHHHHHCTTCCHHHHHHHHHHH
T ss_pred ---CCCCCCCCHHHHHHCCCCCCHHHHHHHHHHH
T ss_conf ---6334553034444206677899999999999
No 9
>d1w44a_ c.37.1.11 (A:) NTPase P4 {Bacteriophage phi-12 [TaxId: 161736]}
Probab=99.86 E-value=5.1e-24 Score=193.07 Aligned_cols=161 Identities=16% Similarity=0.204 Sum_probs=131.5
Q ss_pred CCHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHC--CCEEEEECCCCCHHCCCCCHHHHHHHHHHHHHCCCEEE
Q ss_conf 7625663089888982499995899839999999999919--95699611100010027518999999999871299179
Q 000823 956 QRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAG--ANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVI 1033 (1267)
Q Consensus 956 ~~~e~f~k~~~~kP~~gILL~GPpGTGKT~LAkAIA~elg--~~vi~Id~seL~s~~~Ge~ek~I~~iF~~A~k~~PsII 1033 (1267)
..+..+...+...|.+.+||+||||||||+||+++|.+++ .+|+.++.++++++|.|+.++.++.+|..|+. ||||
T Consensus 109 ~~~~~~~~~~~~~~~g~~l~~G~pG~GKT~la~ala~~~~~~~~~~~~~~~~~~~~~~G~~e~~~~~~f~~a~~--~~il 186 (321)
T d1w44a_ 109 CSPVVAEFGGHRYASGMVIVTGKGNSGKTPLVHALGEALGGKDKYATVRFGEPLSGYNTDFNVFVDDIARAMLQ--HRVI 186 (321)
T ss_dssp BCCEEEEETTEEEESEEEEEECSSSSCHHHHHHHHHHHHHTTSCCEEEEBSCSSTTCBCCHHHHHHHHHHHHHH--CSEE
T ss_pred CCHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEHHHHHHCCCCHHHHHHHHHHHHHHH--CCEE
T ss_conf 46188988614368863888779985088999999998637998089782685442444578999999999862--6589
Q ss_pred EECCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCH----HHHH--CCCCCCCCCCCCH
Q ss_conf 993521221389998437999999886554216886567776899994399999959----9982--0354436999998
Q 000823 1034 FVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDTERILVLAATNRPFDLDE----AVIR--RLPRRLMVNLPDA 1107 (1267)
Q Consensus 1034 iIDEID~L~~~r~~~~~~~a~~~il~~LL~~ldgl~~~~~~~VlVIaTTN~p~~Ld~----aLlr--RFd~~I~v~~Pd~ 1107 (1267)
||||||.+.+.|+.........+++++++..||++.. ..+++||++|| ++.+++ ++++ ||++.+.++.|+.
T Consensus 187 f~DEid~~~~~r~~~~~~~~~~r~v~~lL~e~dg~~~--~~~v~viaatN-~~~~~~~i~~~~~r~~Rf~~~v~v~~pd~ 263 (321)
T d1w44a_ 187 VIDSLKNVIGAAGGNTTSGGISRGAFDLLSDIGAMAA--SRGCVVIASLN-PTSNDDKIVELVKEASRSNSTSLVISTDV 263 (321)
T ss_dssp EEECCTTTC-----------CCHHHHHHHHHHHHHHH--HHTCEEEEECC-CCCCCHHHHHHHHHHHHHSCSEEEEECSS
T ss_pred EEEHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCC--CCCEEEEEECC-CCCCCCCHHHHHHCCCCCCCEEECCCCCH
T ss_conf 7410122212345678987413345156652035566--78849998379-76353101023336575554211589886
Q ss_pred HHHHHHHHHHHHHC
Q ss_conf 89999999998307
Q 000823 1108 PNRAKILQVILAKE 1121 (1267)
Q Consensus 1108 eeR~eILk~ll~k~ 1121 (1267)
+.|.+|++.+....
T Consensus 264 ~~r~~il~~~~~~~ 277 (321)
T d1w44a_ 264 DGEWQVLTRTGEGL 277 (321)
T ss_dssp TTEEEEEEECBTTC
T ss_pred HHHHHHHHHHCCCC
T ss_conf 78999999862584
No 10
>d1gxca_ b.26.1.2 (A:) Chk2 kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.85 E-value=4.1e-21 Score=171.36 Aligned_cols=105 Identities=20% Similarity=0.345 Sum_probs=97.8
Q ss_pred CCHHHCCCCCCCCCEEEECCEEEECCCCCCCEEECCC---------CCCCCEEEEEEEEC-CCCEEEEEEEECCCCEEEC
Q ss_conf 3011024578996222107816873788852000178---------87642489999831-8921899999268736986
Q 000823 126 PWCRLLSQSGQNSNVPICASIFTVGSSRQCNFPLKDQ---------AISAVLCKIKHVQS-EGSAVAMVESIGSKGLQVN 195 (1267)
Q Consensus 126 pWgrL~s~~~~~~~i~i~~~~~tvGr~~~Cd~~l~~~---------~~s~~~c~i~~~~~-~~~~~~~Led~s~nGt~VN 195 (1267)
|||||+++.+++++++|.++.|+|||+..||+.|.++ .||+.||+|.+... .+..++||+|+|+||||||
T Consensus 1 PwgrL~~~~~~~~~~~L~~~~~~iGR~~~cdi~l~~~~~~~~~~~~~ISr~H~~I~~~~~~~~~~~~~i~d~S~NGT~vN 80 (116)
T d1gxca_ 1 PWARLWALQDGFANLECVNDNYWFGRDKSCEYCFDEPLLKRTDKYRTYSKKHFRIFREVGPKNSYIAYIEDHSGNGTFVN 80 (116)
T ss_dssp CCEEEEECSTTCCCEEECSSEEEEESSTTCSEECCCGGGGGSSGGGGSCTTCEEEEEEECTTSSEEEEEEECCSSCEEET
T ss_pred CEEEEEECCCCCCEEEECCCCEEEEECCCCCEEECCCCCCCCCCCCEEECCEEEEEEECCCCCCCEEEEECCCCCCCEEC
T ss_conf 94999854899863885888789615777875844873234333433723149999942568987899978986574699
Q ss_pred CEEECCCCEEECCCCCEEEEEECCCEEEEEEECHH
Q ss_conf 84606888157348989999124873799873002
Q 000823 196 GKNLKKNTSCELRSGDEVVFGSLGNHAYIFQQLLN 230 (1267)
Q Consensus 196 g~~igk~~~~~L~~gDeI~f~~~~~~aYiF~~l~~ 230 (1267)
|++++|++.+.|++||+|.|+.+..++|+|+++..
T Consensus 81 ~~~i~~~~~~~L~~gD~I~ig~~~~~~f~f~d~~~ 115 (116)
T d1gxca_ 81 TELVGKGKRRPLNNNSEIALSLSRNKVFVFFDLTV 115 (116)
T ss_dssp TEECCTTCEEECCTTEEEEESSTTCEEEEEEETTC
T ss_pred CEECCCCCEEECCCCCEEEECCCEEEEEEEEECCC
T ss_conf 98967997788899999998997748999997237
No 11
>d1in4a2 c.37.1.20 (A:17-254) Holliday junction helicase RuvB {Thermotoga maritima [TaxId: 2336]}
Probab=99.84 E-value=9.9e-19 Score=153.63 Aligned_cols=221 Identities=21% Similarity=0.217 Sum_probs=154.8
Q ss_pred CCCHHCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCCCHHCC
Q ss_conf 56100014099999999998572576256630898889824999958998399999999999199569961110001002
Q 000823 932 VTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWF 1011 (1267)
Q Consensus 932 vt~ddI~Gle~vk~~L~e~I~~pl~~~e~f~k~~~~kP~~gILL~GPpGTGKT~LAkAIA~elg~~vi~Id~seL~s~~~ 1011 (1267)
.+|+|++|++++++.|..++..... + .++..++||+||||||||++|+++|++++++++.++..+...
T Consensus 6 ~~~~divGqe~~~~~l~~~i~~~~~------~---~~~~~~~L~~GPpGtGKT~lA~~la~~~~~~~~~~~~~~~~~--- 73 (238)
T d1in4a2 6 KSLDEFIGQENVKKKLSLALEAAKM------R---GEVLDHVLLAGPPGLGKTTLAHIIASELQTNIHVTSGPVLVK--- 73 (238)
T ss_dssp SSGGGCCSCHHHHHHHHHHHHHHHH------H---TCCCCCEEEESSTTSSHHHHHHHHHHHHTCCEEEEETTTCCS---
T ss_pred CCHHHCCCHHHHHHHHHHHHHHHHH------C---CCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCC---
T ss_conf 9299908959999999999997885------3---887774898799997388999999850388853325744224---
Q ss_pred CCCHHHHHHHHHHHHHCCCEEEEECCCHHHHCCCCCCCHHHHHHHHHHHHHH-HCCCC------CCCCCCCEEEEEECCC
Q ss_conf 7518999999999871299179993521221389998437999999886554-21688------6567776899994399
Q 000823 1012 GEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMV-NWDGL------RTKDTERILVLAATNR 1084 (1267)
Q Consensus 1012 Ge~ek~I~~iF~~A~k~~PsIIiIDEID~L~~~r~~~~~~~a~~~il~~LL~-~ldgl------~~~~~~~VlVIaTTN~ 1084 (1267)
...+..++... ...+++||||++.+. ...+......+..... .+.+. ......++++|++||.
T Consensus 74 ---~~~~~~~~~~~--~~~~~~~ide~~~~~-----~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~at~~ 143 (238)
T d1in4a2 74 ---QGDMAAILTSL--ERGDVLFIDEIHRLN-----KAVEELLYSAIEDFQIDIMIGKGPSAKSIRIDIQPFTLVGATTR 143 (238)
T ss_dssp ---HHHHHHHHHHC--CTTCEEEEETGGGCC-----HHHHHHHHHHHHTSCCCC---------------CCCEEEEEESC
T ss_pred ---HHHHHHHHHHH--CCCCCHHHHHHHHHH-----HHHHHHCCCCEEEEEEEEEECCCCCCCCCCCCCCCEEEEEECCC
T ss_conf ---88899998754--358824777898840-----67776421402441454454376002444457887699995478
Q ss_pred CCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC-CCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999599982035443699999889999999998307999-903099999982799899999977643447778753334
Q 000823 1085 PFDLDEAVIRRLPRRLMVNLPDAPNRAKILQVILAKEDLS-PDVDFDAIANMTDGYSGSDLKVIFLSHSLICNVLLLNLW 1163 (1267)
Q Consensus 1085 p~~Ld~aLlrRFd~~I~v~~Pd~eeR~eILk~ll~k~~l~-~didl~~LA~~TeGySg~DLk~LI~~a~li~~v~~~~~l 1163 (1267)
+..+++.+++||...+.++.|+.+++..+++.+...+.+. .+..+..++..+.| +.+.+.
T Consensus 144 ~~~~~~~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~i~~~s~g-d~R~ai------------------ 204 (238)
T d1in4a2 144 SGLLSSPLRSRFGIILELDFYTVKELKEIIKRAASLMDVEIEDAAAEMIAKRSRG-TPRIAI------------------ 204 (238)
T ss_dssp GGGSCHHHHTTCSEEEECCCCCHHHHHHHHHHHHHHTTCCBCHHHHHHHHHTSTT-CHHHHH------------------
T ss_pred CCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC-CHHHHH------------------
T ss_conf 7555543113300799844787787777777765301100257999999996799-899999------------------
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 56799999999999999999999999999899999886419999987798887666799999999980
Q 000823 1164 SDWLLVYLIVLQNLCVTAAHRPIKEILEKEKKERAAAMAEGKPAPALSGCADIRPLNMDDFKYAHERV 1231 (1267)
Q Consensus 1164 ~~~i~~~l~~l~~Lc~~Aa~~aire~l~~~k~~~~~a~~e~~~~~~~~~~~~~~~Vt~eDf~~Al~~v 1231 (1267)
++++.+...+... ....++.+++.+|++.+
T Consensus 205 ------------~~l~~~~~~~~~~--------------------------~~~~it~~~~~~al~~l 234 (238)
T d1in4a2 205 ------------RLTKRVRDMLTVV--------------------------KADRINTDIVLKTMEVL 234 (238)
T ss_dssp ------------HHHHHHHHHHHHH--------------------------TCSSBCHHHHHHHHHHH
T ss_pred ------------HHHHHHHHHHHHH--------------------------CCCCCCHHHHHHHHHHH
T ss_conf ------------9999999999985--------------------------69962899999998865
No 12
>d1ixza_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Thermus thermophilus [TaxId: 274]}
Probab=99.83 E-value=1.3e-19 Score=160.13 Aligned_cols=208 Identities=15% Similarity=0.223 Sum_probs=156.1
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC-CCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCEEEEEE
Q ss_conf 3233223344343045899999887630368751-121233346899136406897058899999999857199099983
Q 000823 422 NLQESFENFPYYLSENTKNVLIAASYIHLKHKDH-AKYTSELTTVNPRILLSGPAGSEIYQEMLAKALAHYFGAKLLIFD 500 (1267)
Q Consensus 422 ~~~vsf~~FPYylse~tk~~L~~~~~~hL~~~~~-~~~~~~L~~~s~rILLsgp~GsE~Yqe~LaKALA~~f~a~LL~lD 500 (1267)
.=+||||+.-.+ |.+|..|.+.... |++++. .+++. ..++.|||.|||| +++.+||||||+..+.+++.++
T Consensus 3 ~p~~~~~di~G~--~~~k~~l~~~i~~-l~~~~~~~~~g~---~~~~giLl~GppG--tGKT~la~aia~~~~~~~~~i~ 74 (247)
T d1ixza_ 3 APKVTFKDVAGA--EEAKEELKEIVEF-LKNPSRFHEMGA---RIPKGVLLVGPPG--VGKTHLARAVAGEARVPFITAS 74 (247)
T ss_dssp CCSCCGGGCCSC--HHHHHHHHHHHHH-HHCHHHHHHTTC---CCCSEEEEECCTT--SSHHHHHHHHHHHTTCCEEEEE
T ss_pred CCCCCHHHHCCH--HHHHHHHHHHHHH-HHCHHHHHHCCC---CCCCEEEEECCCC--CCHHHHHHHHHHHCCCCEEEEE
T ss_conf 899749997157--9999999999999-879999997599---9886488766898--8835999999987399779978
Q ss_pred CCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 45657998625676520388643344655679970334310178888889999999999999999965455555444665
Q 000823 501 SHSLLGGLSSKEAELLKDGTSAEKSCGCVKQGPTSTDLAKSINLPVSESDTPSSSNPPPQGPESQPKMETDTTLTSAGTS 580 (1267)
Q Consensus 501 ~~~~~g~~~~~e~e~~~~~~~~e~~~~~~k~~~~~~~l~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~s 580 (1267)
.+.|..
T Consensus 75 ~~~l~~-------------------------------------------------------------------------- 80 (247)
T d1ixza_ 75 GSDFVE-------------------------------------------------------------------------- 80 (247)
T ss_dssp HHHHHH--------------------------------------------------------------------------
T ss_pred HHHHHH--------------------------------------------------------------------------
T ss_conf 699646--------------------------------------------------------------------------
Q ss_pred CCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 55234467725783268999999899999999877771667411499986210024899997878987778866210135
Q 000823 581 KNHMLRIGDRVRFVGSTSGGLYPTASPTRGPPCGTRGKVALLFEDNPSSKIGVRFDKPIPDGVDLGGQCEGGHGFFCNVT 660 (1267)
Q Consensus 581 ~~~~~~~gdrvk~~g~~~~~~~~~~~~~r~~~~g~~g~v~~~~e~n~s~kvgV~Fd~~~~~~~~l~~~c~~~~~ff~~~~ 660 (1267)
T Consensus 81 -------------------------------------------------------------------------------- 80 (247)
T d1ixza_ 81 -------------------------------------------------------------------------------- 80 (247)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
T ss_conf --------------------------------------------------------------------------------
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHCCC-------CC----HHHHHHHHHHCC--CCCEEE
Q ss_conf 43446888401479999999999863014798499972504341389-------42----256789987219--994899
Q 000823 661 DLRLENSGTEDLDKLLINTLFEVVFSESRSCPFILFMKDAEKSIAGN-------SD----SYSTFKSRLEKL--PDKVIV 727 (1267)
Q Consensus 661 ~~~~~~~~~e~~~k~~i~~L~ev~~~~~~~~p~Ilfi~di~~~l~g~-------~~----~~~~lk~~L~~l--~g~vvv 727 (1267)
+|+|+ .+..|+.+|+.+.. .+|+||||||+|.+++.+ .. ..+.|...++.+ ..+|+|
T Consensus 81 -----~~~g~--~~~~l~~~f~~a~~---~~p~Ii~iDeid~l~~~r~~~~~~~~~~~~~~~~~ll~~~d~~~~~~~viv 150 (247)
T d1ixza_ 81 -----MFVGV--GAARVRDLFETAKR---HAPCIVFIDEIDAVGRKRGSGVGGGNDEREQTLNQLLVEMDGFEKDTAIVV 150 (247)
T ss_dssp -----SCTTH--HHHHHHHHHHHHTT---SSSEEEEEETHHHHHC---------CHHHHHHHHHHHHHHHTCCTTCCEEE
T ss_pred -----CCCCH--HHHHHHHHHHHHHH---CCCEEEEEECHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEE
T ss_conf -----24538--99999999999997---699799997736647467899888758999999999999638777899899
Q ss_pred EEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHH
Q ss_conf 94103578833458999862013477311110135788434433357870367889842089739970798788999999
Q 000823 728 IGSHTHTDNRKEKSHPGGLLFTKFGSNQTALLDLAFPDSFGRLHDRGKEIPKATKLLTKLFPNKVTIHMPQDEALLASWK 807 (1267)
Q Consensus 728 IGs~~~~d~~~~~~~~~~~~l~~~g~~~~~l~d~a~~~~~~r~~~~~~~~~~~d~~l~rlFp~~IeI~LPdeE~RL~Ilk 807 (1267)
||+||+++..|++ |+|+|| |+.+|+|++|+.++|..||+
T Consensus 151 i~tTn~~~~ld~a-------l~R~~R----------------------------------f~~~i~~~~P~~~eR~~il~ 189 (247)
T d1ixza_ 151 MAATNRPDILDPA-------LLRPGR----------------------------------FDRQIAIDAPDVKGREQILR 189 (247)
T ss_dssp EEEESCGGGSCGG-------GGSTTS----------------------------------SCEEEECCSCCHHHHHHHHH
T ss_pred EEECCCCCCCCHH-------HCCCCC----------------------------------CCEEEEECCCCHHHHHHHHH
T ss_conf 9807994006996-------758987----------------------------------85799979969999999999
Q ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCEECC
Q ss_conf 854655666420267406888865249987663231012
Q 000823 808 HQLDRDSETLKMKGNLNHLRTVLGRSGLECEGLETLCIR 846 (1267)
Q Consensus 808 ~qLek~~k~l~~~~Nv~~l~~vL~~~glsgaDLe~L~~~ 846 (1267)
..+.+ .....+++....+..+.||.|+||+.+|..
T Consensus 190 ~~l~~----~~~~~~~~~~~la~~t~g~s~~di~~lv~~ 224 (247)
T d1ixza_ 190 IHARG----KPLAEDVDLALLAKRTPGFVGADLENLLNE 224 (247)
T ss_dssp HHHTT----SCBCTTCCHHHHHHTCTTCCHHHHHHHHHH
T ss_pred HHHCC----CCCCCCCCHHHHHHHCCCCCHHHHHHHHHH
T ss_conf 87506----577654689999977889889999999999
No 13
>d1ixsb2 c.37.1.20 (B:4-242) Holliday junction helicase RuvB {Thermus thermophilus [TaxId: 274]}
Probab=99.79 E-value=2.9e-17 Score=142.72 Aligned_cols=192 Identities=21% Similarity=0.257 Sum_probs=133.6
Q ss_pred CCCHHCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCCCHHCC
Q ss_conf 56100014099999999998572576256630898889824999958998399999999999199569961110001002
Q 000823 932 VTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWF 1011 (1267)
Q Consensus 932 vt~ddI~Gle~vk~~L~e~I~~pl~~~e~f~k~~~~kP~~gILL~GPpGTGKT~LAkAIA~elg~~vi~Id~seL~s~~~ 1011 (1267)
.+|+|++|++++++.|+.++..... + ..++.++||+||||+|||++|+++|+++++++..++.+....
T Consensus 6 ~~~ddivGq~~~~~~L~~~i~~~~~--------~-~~~~~~~Ll~GPpG~GKTtla~~la~~~~~~~~~~~~~~~~~--- 73 (239)
T d1ixsb2 6 KTLDEYIGQERLKQKLRVYLEAAKA--------R-KEPLEHLLLFGPPGLGKTTLAHVIAHELGVNLRVTSGPAIEK--- 73 (239)
T ss_dssp CSGGGSCSCHHHHHHHHHHHHHHTT--------S-SSCCCCEEEECCTTSCHHHHHHHHHHHHTCCEEEEETTTCCS---
T ss_pred CCHHHHCCHHHHHHHHHHHHHHHHH--------C-CCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEECCCCCCCC---
T ss_conf 9888948989999999999997873--------5-888873898897998788899999998498747546875343---
Q ss_pred CCCHHHHHHHHHHHHHCCCEEEEECCCHHHHCCCCCCCHHHHHHHHHHHHH-HHCCCCC------CCCCCCEEEEEECCC
Q ss_conf 751899999999987129917999352122138999843799999988655-4216886------567776899994399
Q 000823 1012 GEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFM-VNWDGLR------TKDTERILVLAATNR 1084 (1267)
Q Consensus 1012 Ge~ek~I~~iF~~A~k~~PsIIiIDEID~L~~~r~~~~~~~a~~~il~~LL-~~ldgl~------~~~~~~VlVIaTTN~ 1084 (1267)
........... ....+|++|||+|.+. ...+......++... ..+.+.. ..+..++++|++|+.
T Consensus 74 ---~~~~~~~~~~~-~~~~~i~~iDe~~~~~-----~~~~~~l~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 144 (239)
T d1ixsb2 74 ---PGDLAAILANS-LEEGDILFIDEIHRLS-----RQAEEHLYPAMEDFVMDIVIGQGPAARTIRLELPRFTLIGATTR 144 (239)
T ss_dssp ---HHHHHHHHHTT-CCTTCEEEEETGGGCC-----HHHHHHHHHHHHHSEEEEECSCTTCCCEEEEECCCCEEEEEESC
T ss_pred ---CHHHHHHHHHH-CCCCCEEEEECCCCCC-----HHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCEEEEEECCC
T ss_conf ---21468998851-0388734431100110-----44787500124333212110465565433468997799963068
Q ss_pred CCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC-CCCCHHHHHHHCCCCCHHHHH
Q ss_conf 9999599982035443699999889999999998307999-903099999982799899999
Q 000823 1085 PFDLDEAVIRRLPRRLMVNLPDAPNRAKILQVILAKEDLS-PDVDFDAIANMTDGYSGSDLK 1145 (1267)
Q Consensus 1085 p~~Ld~aLlrRFd~~I~v~~Pd~eeR~eILk~ll~k~~l~-~didl~~LA~~TeGySg~DLk 1145 (1267)
+....+..++++...+.+..|+.+++.+++...+..+++. .+..+..++..+.| ..+...
T Consensus 145 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~~~l~~ia~~s~g-d~R~a~ 205 (239)
T d1ixsb2 145 PGLITAPLLSRFGIVEHLEYYTPEELAQGVMRDARLLGVRITEEAALEIGRRSRG-TMRVAK 205 (239)
T ss_dssp CSSCSCGGGGGCSEEEECCCCCHHHHHHHHHHHHGGGCCCBCHHHHHHHHHHTTS-SHHHHH
T ss_pred CCCCCCHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCC-CHHHHH
T ss_conf 3334410101221456752057455557889999984876526789999997699-999999
No 14
>d1r7ra3 c.37.1.20 (A:471-735) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.78 E-value=1e-18 Score=153.43 Aligned_cols=207 Identities=20% Similarity=0.306 Sum_probs=158.4
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC-CCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCEEEEEECC
Q ss_conf 332233443430458999998876303687511-2123334689913640689705889999999985719909998345
Q 000823 424 QESFENFPYYLSENTKNVLIAASYIHLKHKDHA-KYTSELTTVNPRILLSGPAGSEIYQEMLAKALAHYFGAKLLIFDSH 502 (1267)
Q Consensus 424 ~vsf~~FPYylse~tk~~L~~~~~~hL~~~~~~-~~~~~L~~~s~rILLsgp~GsE~Yqe~LaKALA~~f~a~LL~lD~~ 502 (1267)
++||+++-.+ |+.|..|.+....+|+.++.. .++ .+.++.|||+||+| .++.+||+|||++++++++.++.+
T Consensus 3 ~~~f~di~G~--~~~k~~l~~~i~~~l~~~~~~~~~g---~~~~~giLL~Gp~G--tGKT~l~~ala~~~~~~~~~~~~~ 75 (265)
T d1r7ra3 3 QVTWEDIGGL--EDVKRELQELVQYPVEHPDKFLKFG---MTPSKGVLFYGPPG--CGKTLLAKAIANECQANFISIKGP 75 (265)
T ss_dssp CCSCSSCSSS--SCCCCHHHHHTHHHHHCHHHHHHCC---CCCCCEEEEBCCTT--SSHHHHHHHHHHHTTCEEEEECHH
T ss_pred CCCHHHHCCH--HHHHHHHHHHHHHHHHCHHHHHHCC---CCCCCEEEEECCCC--CCCHHHHHHHHHHHCCCEEEEEHH
T ss_conf 9989996678--9999999999999963999998679---99887578878998--763047788787718947998879
Q ss_pred CCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 65799862567652038864334465567997033431017888888999999999999999996545555544466555
Q 000823 503 SLLGGLSSKEAELLKDGTSAEKSCGCVKQGPTSTDLAKSINLPVSESDTPSSSNPPPQGPESQPKMETDTTLTSAGTSKN 582 (1267)
Q Consensus 503 ~~~g~~~~~e~e~~~~~~~~e~~~~~~k~~~~~~~l~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 582 (1267)
++.+.
T Consensus 76 ~l~~~--------------------------------------------------------------------------- 80 (265)
T d1r7ra3 76 ELLTM--------------------------------------------------------------------------- 80 (265)
T ss_dssp HHHTS---------------------------------------------------------------------------
T ss_pred HHHHC---------------------------------------------------------------------------
T ss_conf 95253---------------------------------------------------------------------------
Q ss_pred CCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 23446772578326899999989999999987777166741149998621002489999787898777886621013543
Q 000823 583 HMLRIGDRVRFVGSTSGGLYPTASPTRGPPCGTRGKVALLFEDNPSSKIGVRFDKPIPDGVDLGGQCEGGHGFFCNVTDL 662 (1267)
Q Consensus 583 ~~~~~gdrvk~~g~~~~~~~~~~~~~r~~~~g~~g~v~~~~e~n~s~kvgV~Fd~~~~~~~~l~~~c~~~~~ff~~~~~~ 662 (1267)
T Consensus 81 -------------------------------------------------------------------------------- 80 (265)
T d1r7ra3 81 -------------------------------------------------------------------------------- 80 (265)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
T ss_conf --------------------------------------------------------------------------------
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHCC----CCC---H-HHHHHHHHHCC-----CCCEEEEE
Q ss_conf 44688840147999999999986301479849997250434138----942---2-56789987219-----99489994
Q 000823 663 RLENSGTEDLDKLLINTLFEVVFSESRSCPFILFMKDAEKSIAG----NSD---S-YSTFKSRLEKL-----PDKVIVIG 729 (1267)
Q Consensus 663 ~~~~~~~e~~~k~~i~~L~ev~~~~~~~~p~Ilfi~di~~~l~g----~~~---~-~~~lk~~L~~l-----~g~vvvIG 729 (1267)
|+++ ....++.+|..+.. ..|+||||||+|.++.. ..+ . ...+...|..+ ..+|+|||
T Consensus 81 ----~~~~--~~~~l~~~f~~A~~---~~p~il~ideid~l~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~v~vi~ 151 (265)
T d1r7ra3 81 ----WFGE--SEANVREIFDKARQ---AAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIG 151 (265)
T ss_dssp ----CTTT--HHHHHHHHHHHHHH---TCSEEEEESSGGGTCCHHHHCCCTTHHHHHHHHHHHHHTCC------CCEEEE
T ss_pred ----CCCC--HHHHHHHHHHHHHH---CCCCCEEHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEE
T ss_conf ----1651--58999999999986---39843568754632455787678873799999999999962867779989999
Q ss_pred ECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHH
Q ss_conf 10357883345899986201347731111013578843443335787036788984208973997079878899999985
Q 000823 730 SHTHTDNRKEKSHPGGLLFTKFGSNQTALLDLAFPDSFGRLHDRGKEIPKATKLLTKLFPNKVTIHMPQDEALLASWKHQ 809 (1267)
Q Consensus 730 s~~~~d~~~~~~~~~~~~l~~~g~~~~~l~d~a~~~~~~r~~~~~~~~~~~d~~l~rlFp~~IeI~LPdeE~RL~Ilk~q 809 (1267)
+||+++..|++ |+|+|| |+.+|+|++|+.++|..||+.+
T Consensus 152 ttn~~~~ld~a-------l~r~gR----------------------------------f~~~i~~~~p~~~~R~~il~~~ 190 (265)
T d1r7ra3 152 ATNRPDIIDPA-------ILRPGR----------------------------------LDQLIYIPLPDEKSRVAILKAN 190 (265)
T ss_dssp CCBSCTTTSCG-------GGSSTT----------------------------------SEEEEECCCCCCHHHHHHHHHH
T ss_pred ECCCCHHCCHH-------HHCCCC----------------------------------CCEEEEECCHHHHHHHHHHHHH
T ss_conf 17992227997-------807877----------------------------------6479995660788899999999
Q ss_pred HHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCEECC
Q ss_conf 4655666420267406888865249987663231012
Q 000823 810 LDRDSETLKMKGNLNHLRTVLGRSGLECEGLETLCIR 846 (1267)
Q Consensus 810 Lek~~k~l~~~~Nv~~l~~vL~~~glsgaDLe~L~~~ 846 (1267)
+.+ .....+++....+..+.||+|+||..+|..
T Consensus 191 l~~----~~~~~~~~l~~la~~t~g~s~~di~~lv~~ 223 (265)
T d1r7ra3 191 LRK----SPVAKDVDLEFLAKMTNGFSGADLTEICQR 223 (265)
T ss_dssp TTC----C----CCCCHHHHHHHCSSCCHHHHHHHHH
T ss_pred HCC----CCCHHHHHHHHHHHCCCCCCHHHHHHHHHH
T ss_conf 605----771024368999825899999999999999
No 15
>d1sxjc2 c.37.1.20 (C:12-238) Replication factor C3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.72 E-value=3.7e-16 Score=134.38 Aligned_cols=184 Identities=20% Similarity=0.230 Sum_probs=126.6
Q ss_pred CCCHHCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCC-----CEEEEECCCC
Q ss_conf 56100014099999999998572576256630898889824999958998399999999999199-----5699611100
Q 000823 932 VTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGA-----NFINISMSSI 1006 (1267)
Q Consensus 932 vt~ddI~Gle~vk~~L~e~I~~pl~~~e~f~k~~~~kP~~gILL~GPpGTGKT~LAkAIA~elg~-----~vi~Id~seL 1006 (1267)
.+++|++|.+++++.|+.++.. + ...++||+||||+|||++|+++|+++.. .++.++.++.
T Consensus 11 ~~~~divg~~~~~~~L~~~i~~----------~----~~~~lLl~Gp~G~GKttl~~~la~~l~~~~~~~~~~e~~~~~~ 76 (227)
T d1sxjc2 11 ETLDEVYGQNEVITTVRKFVDE----------G----KLPHLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDD 76 (227)
T ss_dssp SSGGGCCSCHHHHHHHHHHHHT----------T----CCCCEEEECSSSSSHHHHHHHHHHHHHTTSHHHHEEEECTTSC
T ss_pred CCHHHCCCCHHHHHHHHHHHHC----------C----CCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCC
T ss_conf 9999835969999999999976----------9----9985999889987755899999998516777641577315556
Q ss_pred CHHCCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCC
Q ss_conf 01002751899999999987129917999352122138999843799999988655421688656777689999439999
Q 000823 1007 TSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDTERILVLAATNRPF 1086 (1267)
Q Consensus 1007 ~s~~~Ge~ek~I~~iF~~A~k~~PsIIiIDEID~L~~~r~~~~~~~a~~~il~~LL~~ldgl~~~~~~~VlVIaTTN~p~ 1086 (1267)
.+.............+.........||+|||+|.+. ...+.+ ++..++.. ...++++.++|.+.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~kiiiiDe~d~~~-----~~~~~~-------Ll~~le~~----~~~~~~~~~~~~~~ 140 (227)
T d1sxjc2 77 RGIDVVRNQIKDFASTRQIFSKGFKLIILDEADAMT-----NAAQNA-------LRRVIERY----TKNTRFCVLANYAH 140 (227)
T ss_dssp CSHHHHHTHHHHHHHBCCSSSCSCEEEEETTGGGSC-----HHHHHH-------HHHHHHHT----TTTEEEEEEESCGG
T ss_pred CCEEEEECCHHHCCCCCCCCCCCEEEEEEECCCCCH-----HHHHHH-------HHHHHHHC----CCCEEECCCCCCHH
T ss_conf 875432100010111000257771899996632000-----237899-------99886311----20023201267087
Q ss_pred CCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC-CCCCHHHHHHHCCCCCHHHHHHHHHH
Q ss_conf 99599982035443699999889999999998307999-90309999998279989999997764
Q 000823 1087 DLDEAVIRRLPRRLMVNLPDAPNRAKILQVILAKEDLS-PDVDFDAIANMTDGYSGSDLKVIFLS 1150 (1267)
Q Consensus 1087 ~Ld~aLlrRFd~~I~v~~Pd~eeR~eILk~ll~k~~l~-~didl~~LA~~TeGySg~DLk~LI~~ 1150 (1267)
.+.+.+++|+ ..+.|..|+.++..+++..++..+++. ++..++.+++.+.| |++.+++.
T Consensus 141 ~i~~~i~sr~-~~i~~~~~~~~~i~~~l~~I~~~e~i~i~~~~l~~i~~~s~G----d~R~ain~ 200 (227)
T d1sxjc2 141 KLTPALLSQC-TRFRFQPLPQEAIERRIANVLVHEKLKLSPNAEKALIELSNG----DMRRVLNV 200 (227)
T ss_dssp GSCHHHHTTS-EEEECCCCCHHHHHHHHHHHHHTTTCCBCHHHHHHHHHHHTT----CHHHHHHH
T ss_pred HHHHHHHHHH-HHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC----CHHHHHHH
T ss_conf 7599999887-540123565200011021221111245898999999998499----69999999
No 16
>d1njfa_ c.37.1.20 (A:) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=99.71 E-value=4.4e-15 Score=126.38 Aligned_cols=174 Identities=22% Similarity=0.309 Sum_probs=127.9
Q ss_pred CCCHHCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCC--------------
Q ss_conf 561000140999999999985725762566308988898249999589983999999999991995--------------
Q 000823 932 VTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGAN-------------- 997 (1267)
Q Consensus 932 vt~ddI~Gle~vk~~L~e~I~~pl~~~e~f~k~~~~kP~~gILL~GPpGTGKT~LAkAIA~elg~~-------------- 997 (1267)
.+|+|+.|.+.+++.|+..+.. .+.+..+||+||||+|||++|+++++.+...
T Consensus 9 ~~~~dlig~~~~~~~L~~~i~~-------------~~~~~~~Ll~Gp~G~GKtt~a~~~~~~l~~~~~~~~~~~~~~~~~ 75 (239)
T d1njfa_ 9 QTFADVVGQEHVLTALANGLSL-------------GRIHHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCDNC 75 (239)
T ss_dssp SSGGGSCSCHHHHHHHHHHHHT-------------TCCCSEEEEECSTTSSHHHHHHHHHHHHHCTTCSCSSCCSCSHHH
T ss_pred CCHHHCCCHHHHHHHHHHHHHC-------------CCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
T ss_conf 9898815959999999999985-------------998705988889987589999999998468556666755542479
Q ss_pred ----------EEEEECCCCCHHCCCCCHHHHHHHHHHHHHC----CCEEEEECCCHHHHCCCCCCCHHHHHHHHHHHHHH
Q ss_conf ----------6996111000100275189999999998712----99179993521221389998437999999886554
Q 000823 998 ----------FINISMSSITSKWFGEGEKYVKAVFSLASKI----APSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMV 1063 (1267)
Q Consensus 998 ----------vi~Id~seL~s~~~Ge~ek~I~~iF~~A~k~----~PsIIiIDEID~L~~~r~~~~~~~a~~~il~~LL~ 1063 (1267)
++.++.++. .....++.++..+... ...|++|||+|.| + ....+.|+.
T Consensus 76 ~~i~~~~~~~~~~~~~~~~------~~i~~ir~~~~~~~~~~~~~~~kviiIde~d~l-----~-------~~~q~~Llk 137 (239)
T d1njfa_ 76 REIEQGRFVDLIEIDAASR------TKVEDTRDLLDNVQYAPARGRFKVYLIDEVHML-----S-------RHSFNALLK 137 (239)
T ss_dssp HHHHHTCCTTEEEEETTCS------SSHHHHHHHHHSCCCSCSSSSSEEEEEETGGGS-----C-------HHHHHHHHH
T ss_pred HHHHCCCCCEEEEECCHHC------CCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCC-----C-------HHHHHHHHH
T ss_conf 9997479870799611200------789999999999974652599879999781108-----9-------999999999
Q ss_pred HCCCCCCCCCCCEEEEEECCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC-CCCCHHHHHHHCCCCCHH
Q ss_conf 2168865677768999943999999599982035443699999889999999998307999-903099999982799899
Q 000823 1064 NWDGLRTKDTERILVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNRAKILQVILAKEDLS-PDVDFDAIANMTDGYSGS 1142 (1267)
Q Consensus 1064 ~ldgl~~~~~~~VlVIaTTN~p~~Ld~aLlrRFd~~I~v~~Pd~eeR~eILk~ll~k~~l~-~didl~~LA~~TeGySg~ 1142 (1267)
.++.. ..++.+|++||.+..+.+++++|| ..+.|+.|+.++..+++...+..++.. ++..++.++..+.|
T Consensus 138 ~lE~~----~~~~~~il~tn~~~~i~~~i~SRc-~~i~~~~~~~~~i~~~l~~i~~~e~~~~~~~~l~~i~~~s~G---- 208 (239)
T d1njfa_ 138 TLEEP----PEHVKFLLATTDPQKLPVTILSRC-LQFHLKALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEG---- 208 (239)
T ss_dssp HHHSC----CTTEEEEEEESCGGGSCHHHHTTS-EEEECCCCCHHHHHHHHHHHHHHHTCCBCHHHHHHHHHHTTT----
T ss_pred HHHCC----CCCEEEEEECCCCCCCCHHHHHHH-CCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCC----
T ss_conf 98568----988699997388563676576121-022224676787666887877643147899999999997699----
Q ss_pred HHH
Q ss_conf 999
Q 000823 1143 DLK 1145 (1267)
Q Consensus 1143 DLk 1145 (1267)
|++
T Consensus 209 d~R 211 (239)
T d1njfa_ 209 SLR 211 (239)
T ss_dssp CHH
T ss_pred CHH
T ss_conf 799
No 17
>d1iqpa2 c.37.1.20 (A:2-232) Replication factor C {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=99.70 E-value=8e-16 Score=131.93 Aligned_cols=179 Identities=23% Similarity=0.278 Sum_probs=128.8
Q ss_pred CCCHHCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHC-----CCEEEEECCCC
Q ss_conf 5610001409999999999857257625663089888982499995899839999999999919-----95699611100
Q 000823 932 VTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAG-----ANFINISMSSI 1006 (1267)
Q Consensus 932 vt~ddI~Gle~vk~~L~e~I~~pl~~~e~f~k~~~~kP~~gILL~GPpGTGKT~LAkAIA~elg-----~~vi~Id~seL 1006 (1267)
.+|+|+.|.+++++.|+.++.. ....++||+||||+|||++|+++|+++. .+++.+++++.
T Consensus 21 ~~~~diig~~~~~~~l~~~i~~--------------~~~~~lll~Gp~G~GKTtla~~iak~l~~~~~~~~~~e~n~s~~ 86 (231)
T d1iqpa2 21 QRLDDIVGQEHIVKRLKHYVKT--------------GSMPHLLFAGPPGVGKTTAALALARELFGENWRHNFLELNASDE 86 (231)
T ss_dssp CSTTTCCSCHHHHHHHHHHHHH--------------TCCCEEEEESCTTSSHHHHHHHHHHHHHGGGHHHHEEEEETTCH
T ss_pred CCHHHCCCCHHHHHHHHHHHHC--------------CCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCC
T ss_conf 9899913939999999999985--------------99976999789997487999999999873146777158756766
Q ss_pred CHHCCCCCHHHHHHHH--HHHHHCCCEEEEECCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCC
Q ss_conf 0100275189999999--99871299179993521221389998437999999886554216886567776899994399
Q 000823 1007 TSKWFGEGEKYVKAVF--SLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDTERILVLAATNR 1084 (1267)
Q Consensus 1007 ~s~~~Ge~ek~I~~iF--~~A~k~~PsIIiIDEID~L~~~r~~~~~~~a~~~il~~LL~~ldgl~~~~~~~VlVIaTTN~ 1084 (1267)
.+.. .......... .......+.||+|||+|.+.. .... .|+..+.. ...++.+|+++|.
T Consensus 87 ~~~~--~~~~~~~~~~~~~~~~~~~~~iilide~d~~~~-----~~~~-------~ll~~l~~----~~~~~~~i~~~n~ 148 (231)
T d1iqpa2 87 RGIN--VIREKVKEFARTKPIGGASFKIIFLDEADALTQ-----DAQQ-------ALRRTMEM----FSSNVRFILSCNY 148 (231)
T ss_dssp HHHH--TTHHHHHHHHHSCCGGGCSCEEEEEETGGGSCH-----HHHH-------HHHHHHHH----TTTTEEEEEEESC
T ss_pred CCHH--HHHHHHHHHHHHHHCCCCCCEEEEEHHHHHCCH-----HHHH-------HHHHHCCC----CCCCEEEEECCCC
T ss_conf 6634--888888888751001578722886143443121-----4789-------87641124----7764478861487
Q ss_pred CCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC-CCCCHHHHHHHCCCCCHHHHHHH
Q ss_conf 9999599982035443699999889999999998307999-90309999998279989999997
Q 000823 1085 PFDLDEAVIRRLPRRLMVNLPDAPNRAKILQVILAKEDLS-PDVDFDAIANMTDGYSGSDLKVI 1147 (1267)
Q Consensus 1085 p~~Ld~aLlrRFd~~I~v~~Pd~eeR~eILk~ll~k~~l~-~didl~~LA~~TeGySg~DLk~L 1147 (1267)
+..+++.+++|| ..+.+..|+..+...+++..+.++++. ++..++.+++...| |++.+
T Consensus 149 ~~~i~~~l~sR~-~~i~~~~~~~~~~~~~l~~~~~~e~i~i~~~~l~~I~~~~~g----diR~a 207 (231)
T d1iqpa2 149 SSKIIEPIQSRC-AIFRFRPLRDEDIAKRLRYIAENEGLELTEEGLQAILYIAEG----DMRRA 207 (231)
T ss_dssp GGGSCHHHHHTE-EEEECCCCCHHHHHHHHHHHHHTTTCEECHHHHHHHHHHHTT----CHHHH
T ss_pred HHHCHHHHHCCC-CCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCC----CHHHH
T ss_conf 665657684731-210123343046778998889983999899999999998399----79999
No 18
>d1lgpa_ b.26.1.2 (A:) Cell cycle checkpoint protein Chfr {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.69 E-value=3.4e-17 Score=142.18 Aligned_cols=104 Identities=25% Similarity=0.492 Sum_probs=89.1
Q ss_pred CCCCHHHCCCC--CCCCCEEEECCEEEECCCCCCCEEECC-CCCCCCEEEEEEEECCCCEEEEEEEECCCCEEECCEEEC
Q ss_conf 77301102457--899622210781687378885200017-887642489999831892189999926873698684606
Q 000823 124 STPWCRLLSQS--GQNSNVPICASIFTVGSSRQCNFPLKD-QAISAVLCKIKHVQSEGSAVAMVESIGSKGLQVNGKNLK 200 (1267)
Q Consensus 124 ~~pWgrL~s~~--~~~~~i~i~~~~~tvGr~~~Cd~~l~~-~~~s~~~c~i~~~~~~~~~~~~Led~s~nGt~VNg~~ig 200 (1267)
.+|||||+.+. ...+.+.+.+..|||||+.+||+.|.+ +.||+.||+|.+...++ .++++|.|+|||||||+++.
T Consensus 1 ~~pwg~Li~~~~~~~~~~~~l~~~~~~iGR~~~~di~l~d~~~iSr~Ha~I~~~~~~~--~~~~~d~S~nGT~vNg~~i~ 78 (113)
T d1lgpa_ 1 MQPWGRLLRLGAEEGEPHVLLRKREWTIGRRRGCDLSFPSNKLVSGDHCRIVVDEKSG--QVTLEDTSTSGTVINKLKVV 78 (113)
T ss_dssp CCCCEEECCTTCCSSSCCEEECSSEEEEESSTTSSEECTTCTTSCTTCEEEEECTTTC--CEEEEECSSSCCCCCCCCCC
T ss_pred CCCEEEEEEECCCCCCEEEEECCCCEEECCCCCCCEEECCCCCCCHHHEEEEECCCEE--EEEECCCCCEEEEECCEECC
T ss_conf 9973999997798885489969987841889778768048887695992998705403--68730898645689999957
Q ss_pred CCCEEECCCCCEEEEEECC-----CEEEEEEECH
Q ss_conf 8881573489899991248-----7379987300
Q 000823 201 KNTSCELRSGDEVVFGSLG-----NHAYIFQQLL 229 (1267)
Q Consensus 201 k~~~~~L~~gDeI~f~~~~-----~~aYiF~~l~ 229 (1267)
++..+.|++||+|.|+... +.+|+|+++.
T Consensus 79 ~~~~~~L~~GD~I~i~~~~~~~~~~~~f~~e~~~ 112 (113)
T d1lgpa_ 79 KKQTCPLQTGDVIYLVYRKNEPEHNVAYLYESLS 112 (113)
T ss_dssp CSSCCCCCTTCEEEEECCSSCGGGCEEEECCCSC
T ss_pred CCCEEECCCCCEEEEEECCCCCCCCEEEEEECCC
T ss_conf 8946898999999996658886314799998168
No 19
>d1qvra3 c.37.1.20 (A:536-850) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=99.66 E-value=1.1e-14 Score=123.48 Aligned_cols=168 Identities=20% Similarity=0.284 Sum_probs=126.3
Q ss_pred HCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHH---CCCEEEEECCCCC-----
Q ss_conf 00140999999999985725762566308988898249999589983999999999991---9956996111000-----
Q 000823 936 DIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEA---GANFINISMSSIT----- 1007 (1267)
Q Consensus 936 dI~Gle~vk~~L~e~I~~pl~~~e~f~k~~~~kP~~gILL~GPpGTGKT~LAkAIA~el---g~~vi~Id~seL~----- 1007 (1267)
.+.|++++++.+...+...... -....+|...+||+||+|+|||.+|+++|..+ +.++++++|+++.
T Consensus 24 ~v~GQ~~ai~~v~~~i~~~~~~-----l~~~~kp~~~~lf~Gp~G~GKt~lak~la~~l~~~~~~~~~~~~~~~~~~~~~ 98 (315)
T d1qvra3 24 RVVGQDEAIRAVADAIRRARAG-----LKDPNRPIGSFLFLGPTGVGKTELAKTLAATLFDTEEAMIRIDMTEYMEKHAV 98 (315)
T ss_dssp HSCSCHHHHHHHHHHHHHHGGG-----CSCSSSCSEEEEEBSCSSSSHHHHHHHHHHHHHSSGGGEEEECTTTCCSSGGG
T ss_pred EEECHHHHHHHHHHHHHHHHCC-----CCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHH
T ss_conf 2708799999999999998657-----89988876699997888624899999999983588753488731554542156
Q ss_pred HHCCCCCHHHHH-----HHHHHHHHCCCEEEEECCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCC-------CCCC
Q ss_conf 100275189999-----9999987129917999352122138999843799999988655421688656-------7776
Q 000823 1008 SKWFGEGEKYVK-----AVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTK-------DTER 1075 (1267)
Q Consensus 1008 s~~~Ge~ek~I~-----~iF~~A~k~~PsIIiIDEID~L~~~r~~~~~~~a~~~il~~LL~~ldgl~~~-------~~~~ 1075 (1267)
+..+|.+++|+. .+.+..++++.+||++||||..- ..+.+.|+..++....+ +-.+
T Consensus 99 ~~L~g~~~gyvG~~~~~~l~~~~~~~p~~Vvl~DEieK~~------------~~v~~~ll~~l~~g~~~~~~gr~v~~~~ 166 (315)
T d1qvra3 99 SRLIGAPPGYVGYEEGGQLTEAVRRRPYSVILFDEIEKAH------------PDVFNILLQILDDGRLTDSHGRTVDFRN 166 (315)
T ss_dssp GGC--------------CHHHHHHHCSSEEEEESSGGGSC------------HHHHHHHHHHHTTTEECCSSSCCEECTT
T ss_pred HHHCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEHHHHCC------------HHHHHHHHHHHCCCCEECCCCCEECCCC
T ss_conf 6514899987674667848999984998379971475407------------8999899998613834279996853754
Q ss_pred EEEEEECCC--------------------------CCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 899994399--------------------------999959998203544369999988999999999830
Q 000823 1076 ILVLAATNR--------------------------PFDLDEAVIRRLPRRLMVNLPDAPNRAKILQVILAK 1120 (1267)
Q Consensus 1076 VlVIaTTN~--------------------------p~~Ld~aLlrRFd~~I~v~~Pd~eeR~eILk~ll~k 1120 (1267)
.++|+|||- ...+.|++++||+.++.|...+.++..+|+...+..
T Consensus 167 ~i~i~tsnlG~~~i~~~~~~~~~~~~~~~~~~~~l~~~f~pEflnRid~Ii~F~~L~~~~~~~I~~~~l~~ 237 (315)
T d1qvra3 167 TVIILTSNLGSPLILEGLQKGWPYERIRDEVFKVLQQHFRPEFLNRLDEIVVFRPLTKEQIRQIVEIQLSY 237 (315)
T ss_dssp EEEEEECCTTHHHHHHHHHTTCCHHHHHHHHHHHHHTTSCHHHHHTCSBCCBCCCCCHHHHHHHHHHHHHH
T ss_pred EEEEEECCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHCCCEEEECCCHHHHHHHHHHHHHHHH
T ss_conf 28987424576777640011220455567788888862388787217805432102454368999999999
No 20
>d1sxja2 c.37.1.20 (A:295-547) Replication factor C1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.66 E-value=3.3e-15 Score=127.28 Aligned_cols=201 Identities=19% Similarity=0.226 Sum_probs=129.4
Q ss_pred CCCHHCCCCHHHHHHHHHHHHCCCCCHH-HH--HCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCCCH
Q ss_conf 5610001409999999999857257625-66--30898889824999958998399999999999199569961110001
Q 000823 932 VTFDDIGALENVKDTLKELVMLPLQRPE-LF--CKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITS 1008 (1267)
Q Consensus 932 vt~ddI~Gle~vk~~L~e~I~~pl~~~e-~f--~k~~~~kP~~gILL~GPpGTGKT~LAkAIA~elg~~vi~Id~seL~s 1008 (1267)
.+|+|++|.+..+++|++.+........ .+ .......+.+++||+||||||||++|+++|++++++++.++++++.+
T Consensus 11 ~~~~dlig~~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~lll~GPpG~GKTt~a~~la~~~~~~~~~~~~~~~~~ 90 (253)
T d1sxja2 11 TNLQQVCGNKGSVMKLKNWLANWENSKKNSFKHAGKDGSGVFRAAMLYGPPGIGKTTAAHLVAQELGYDILEQNASDVRS 90 (253)
T ss_dssp SSGGGCCSCHHHHHHHHHHHHTHHHHHHTTTCCCCTTSTTSCSEEEEECSTTSSHHHHHHHHHHHTTCEEEEECTTSCCC
T ss_pred CCHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHH
T ss_conf 99999669899999999999962530023432320257888744999879999888999999999875120134432211
Q ss_pred HCCCCC--HHHH----------HHHHHHHHHCCCEEEEECCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCE
Q ss_conf 002751--8999----------9999998712991799935212213899984379999998865542168865677768
Q 000823 1009 KWFGEG--EKYV----------KAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDTERI 1076 (1267)
Q Consensus 1009 ~~~Ge~--ek~I----------~~iF~~A~k~~PsIIiIDEID~L~~~r~~~~~~~a~~~il~~LL~~ldgl~~~~~~~V 1076 (1267)
.+.... ...+ ...........+.++++||+|.+.... ......++. .... ....+
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~ide~~~~~~~~-----~~~~~~~~~----~~~~----~~~~i 157 (253)
T d1sxja2 91 KTLLNAGVKNALDNMSVVGYFKHNEEAQNLNGKHFVIIMDEVDGMSGGD-----RGGVGQLAQ----FCRK----TSTPL 157 (253)
T ss_dssp HHHHHHTGGGGTTBCCSTTTTTC----CCSSTTSEEEEECSGGGCCTTS-----TTHHHHHHH----HHHH----CSSCE
T ss_pred HHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCH-----HHHHHHHHH----HHCC----CCCCC
T ss_conf 6889999988763121210133432014556651377763011111000-----134677765----4012----34222
Q ss_pred EEEEECCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC-CCCCHHHHHHHCCCCCHHHHHHHHHHH
Q ss_conf 999943999999599982035443699999889999999998307999-903099999982799899999977643
Q 000823 1077 LVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNRAKILQVILAKEDLS-PDVDFDAIANMTDGYSGSDLKVIFLSH 1151 (1267)
Q Consensus 1077 lVIaTTN~p~~Ld~aLlrRFd~~I~v~~Pd~eeR~eILk~ll~k~~l~-~didl~~LA~~TeGySg~DLk~LI~~a 1151 (1267)
+++++++....+++ +++|+ ..|.|+.|+.+++..+++.++.++++. ++..+..|+..+.| |++.+++..
T Consensus 158 i~i~~~~~~~~~~~-l~~~~-~~i~f~~~~~~~i~~~l~~i~~~e~i~i~~~~l~~i~~~s~G----DiR~ai~~L 227 (253)
T d1sxja2 158 ILICNERNLPKMRP-FDRVC-LDIQFRRPDANSIKSRLMTIAIREKFKLDPNVIDRLIQTTRG----DIRQVINLL 227 (253)
T ss_dssp EEEESCTTSSTTGG-GTTTS-EEEECCCCCHHHHHHHHHHHHHHHTCCCCTTHHHHHHHHTTT----CHHHHHHHH
T ss_pred CCCCCCCCCCCCCC-CCCEE-EEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCC----CHHHHHHHH
T ss_conf 11135555211353-24403-653114531467889999999980999999999999996797----099999999
No 21
>d1sxjd2 c.37.1.20 (D:26-262) Replication factor C2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.65 E-value=5.2e-14 Score=118.35 Aligned_cols=183 Identities=20% Similarity=0.235 Sum_probs=124.1
Q ss_pred CCCHHCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHH------CCCEEEEECCC
Q ss_conf 561000140999999999985725762566308988898249999589983999999999991------99569961110
Q 000823 932 VTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEA------GANFINISMSS 1005 (1267)
Q Consensus 932 vt~ddI~Gle~vk~~L~e~I~~pl~~~e~f~k~~~~kP~~gILL~GPpGTGKT~LAkAIA~el------g~~vi~Id~se 1005 (1267)
.+|+|+.|.+++++.|+.++.. ....++||+||||+|||++++++|+++ ....+.++.+.
T Consensus 9 ~~~~diig~~~~~~~l~~~i~~--------------~~~~~lll~Gp~G~GKTtl~~~i~~~l~~~~~~~~~~~~~~~~~ 74 (237)
T d1sxjd2 9 KNLDEVTAQDHAVTVLKKTLKS--------------ANLPHMLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASD 74 (237)
T ss_dssp SSTTTCCSCCTTHHHHHHHTTC--------------TTCCCEEEECSTTSSHHHHHHHHHHHHHHHHHHTTSEEEECSSS
T ss_pred CCHHHCCCCHHHHHHHHHHHHC--------------CCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCHHHEECCC
T ss_conf 9788726939999999999986--------------99885999899999849999999999709763343212200211
Q ss_pred CCHHC-CCCCHHHHH---------HHHHHHHHCCCEEEEECCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 00100-275189999---------99999871299179993521221389998437999999886554216886567776
Q 000823 1006 ITSKW-FGEGEKYVK---------AVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDTER 1075 (1267)
Q Consensus 1006 L~s~~-~Ge~ek~I~---------~iF~~A~k~~PsIIiIDEID~L~~~r~~~~~~~a~~~il~~LL~~ldgl~~~~~~~ 1075 (1267)
..+.. .....+... ..+.........||+|||+|.+.. . ..+.++..+.. ....
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~viiiDe~d~l~~-----~-------~~~~l~~~~~~----~~~~ 138 (237)
T d1sxjd2 75 ERGISIVREKVKNFARLTVSKPSKHDLENYPCPPYKIIILDEADSMTA-----D-------AQSALRRTMET----YSGV 138 (237)
T ss_dssp CCCHHHHTTHHHHHHHSCCCCCCTTHHHHSCCCSCEEEEETTGGGSCH-----H-------HHHHHHHHHHH----TTTT
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCH-----H-------HHHHHHHCCCC----CCCC
T ss_conf 356067899998876544432467877613566736999955133677-----7-------78887630122----2233
Q ss_pred EEEEEECCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC-CCCCHHHHHHHCCCCCHHHHHHHHH
Q ss_conf 8999943999999599982035443699999889999999998307999-9030999999827998999999776
Q 000823 1076 ILVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNRAKILQVILAKEDLS-PDVDFDAIANMTDGYSGSDLKVIFL 1149 (1267)
Q Consensus 1076 VlVIaTTN~p~~Ld~aLlrRFd~~I~v~~Pd~eeR~eILk~ll~k~~l~-~didl~~LA~~TeGySg~DLk~LI~ 1149 (1267)
..+|.+++....+.+.+++|| ..+.|+.|+.++..++++.++.++++. ++..++.++....| |++.+++
T Consensus 139 ~~~i~~~~~~~~~~~~l~sr~-~~i~f~~~~~~~~~~~L~~i~~~e~i~i~~~~l~~ia~~s~g----d~R~ai~ 208 (237)
T d1sxjd2 139 TRFCLICNYVTRIIDPLASQC-SKFRFKALDASNAIDRLRFISEQENVKCDDGVLERILDISAG----DLRRGIT 208 (237)
T ss_dssp EEEEEEESCGGGSCHHHHHHS-EEEECCCCCHHHHHHHHHHHHHTTTCCCCHHHHHHHHHHTSS----CHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCHH-HHHCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCC----CHHHHHH
T ss_conf 332122466422233111000-110233333321100101145552675789999999998599----8999999
No 22
>d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Probab=99.63 E-value=1.6e-13 Score=114.77 Aligned_cols=225 Identities=14% Similarity=0.081 Sum_probs=139.3
Q ss_pred HHCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHH----CCCEEEEECCCCCH--
Q ss_conf 000140999999999985725762566308988898249999589983999999999991----99569961110001--
Q 000823 935 DDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEA----GANFINISMSSITS-- 1008 (1267)
Q Consensus 935 ddI~Gle~vk~~L~e~I~~pl~~~e~f~k~~~~kP~~gILL~GPpGTGKT~LAkAIA~el----g~~vi~Id~seL~s-- 1008 (1267)
+.++|.+..++.+.+++...+..+ ..++.++||+||||||||++++++++.+ ++.++.+++.....
T Consensus 16 ~~l~~Re~ei~~l~~~l~~~l~~~--------~~~~~~lll~GppGtGKT~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 87 (276)
T d1fnna2 16 KRLPHREQQLQQLDILLGNWLRNP--------GHHYPRATLLGRPGTGKTVTLRKLWELYKDKTTARFVYINGFIYRNFT 87 (276)
T ss_dssp SCCTTCHHHHHHHHHHHHHHHHST--------TSSCCEEEEECCTTSSHHHHHHHHHHHHTTSCCCEEEEEETTTCCSHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHCC--------CCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHH
T ss_conf 878877999999999999998578--------988881688898999899999999999754468857873230011246
Q ss_pred --------------HCCCCCHHH-HHHHHHHHH-HCCCEEEEECCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf --------------002751899-999999987-1299179993521221389998437999999886554216886567
Q 000823 1009 --------------KWFGEGEKY-VKAVFSLAS-KIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKD 1072 (1267)
Q Consensus 1009 --------------~~~Ge~ek~-I~~iF~~A~-k~~PsIIiIDEID~L~~~r~~~~~~~a~~~il~~LL~~ldgl~~~~ 1072 (1267)
...+..... ...+..... .....++++|++|.+. .........++..+ ....
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~---------~~~~~~~~~~~~~~---~~~~ 155 (276)
T d1fnna2 88 AIIGEIARSLNIPFPRRGLSRDEFLALLVEHLRERDLYMFLVLDDAFNLA---------PDILSTFIRLGQEA---DKLG 155 (276)
T ss_dssp HHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHTTCCEEEEEETGGGSC---------HHHHHHHHHHTTCH---HHHS
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH---------HHHHHHHHHHHHCC---CCCC
T ss_conf 66545677643345553254357899999987520654332036888753---------54310688887404---4335
Q ss_pred CCCEEEEEECCCC---CCCCHHHHHCCC-CCCCCCCCCHHHHHHHHHHHHHHCCC---CCCCCHHHHHHHCCCC-----C
Q ss_conf 7768999943999---999599982035-44369999988999999999830799---9903099999982799-----8
Q 000823 1073 TERILVLAATNRP---FDLDEAVIRRLP-RRLMVNLPDAPNRAKILQVILAKEDL---SPDVDFDAIANMTDGY-----S 1140 (1267)
Q Consensus 1073 ~~~VlVIaTTN~p---~~Ld~aLlrRFd-~~I~v~~Pd~eeR~eILk~ll~k~~l---~~didl~~LA~~TeGy-----S 1140 (1267)
..++.+|++++.. +.+++.+.+|+. ..|.|+.|+.+++.+|++..+..... ..+..++.++..+..+ +
T Consensus 156 ~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~i~~~~~~~~e~~~il~~r~~~~~~~~~~~~~~l~~ia~~~~~~~~~~~~ 235 (276)
T d1fnna2 156 AFRIALVIVGHNDAVLNNLDPSTRGIMGKYVIRFSPYTKDQIFDILLDRAKAGLAEGSYSEDILQMIADITGAQTPLDTN 235 (276)
T ss_dssp SCCEEEEEEESSTHHHHTSCHHHHHHHTTCEEECCCCBHHHHHHHHHHHHHHHBCTTSSCHHHHHHHHHHHSBSSTTCTT
T ss_pred CCCEEEEECCCCHHHHHHCCHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHC
T ss_conf 65248862587645443113036655110110344123888999999999985245666378999999970014446553
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 99999977643447778753334567999999999999999999999999998999998864199999877988876667
Q 000823 1141 GSDLKVIFLSHSLICNVLLLNLWSDWLLVYLIVLQNLCVTAAHRPIKEILEKEKKERAAAMAEGKPAPALSGCADIRPLN 1220 (1267)
Q Consensus 1141 g~DLk~LI~~a~li~~v~~~~~l~~~i~~~l~~l~~Lc~~Aa~~aire~l~~~k~~~~~a~~e~~~~~~~~~~~~~~~Vt 1220 (1267)
+++++. ..++|+.|+..+..+ +...|+
T Consensus 236 ~G~~R~---------------------------a~~ll~~a~~~A~~~--------------------------~~~~I~ 262 (276)
T d1fnna2 236 RGDARL---------------------------AIDILYRSAYAAQQN--------------------------GRKHIA 262 (276)
T ss_dssp SCCHHH---------------------------HHHHHHHHHHHHHHT--------------------------TCSSCC
T ss_pred CCCHHH---------------------------HHHHHHHHHHHHHHC--------------------------CCCCCC
T ss_conf 899999---------------------------999999999999981--------------------------899849
Q ss_pred HHHHHHHHHHHC
Q ss_conf 999999999803
Q 000823 1221 MDDFKYAHERVC 1232 (1267)
Q Consensus 1221 ~eDf~~Al~~v~ 1232 (1267)
++|+++|.+++.
T Consensus 263 ~edv~~A~~~~~ 274 (276)
T d1fnna2 263 PEDVRKSSKEVL 274 (276)
T ss_dssp HHHHHHHHHHHS
T ss_pred HHHHHHHHHHHH
T ss_conf 999999999985
No 23
>d1r6bx3 c.37.1.20 (X:437-751) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=99.63 E-value=4.8e-15 Score=126.08 Aligned_cols=168 Identities=18% Similarity=0.267 Sum_probs=125.8
Q ss_pred HCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCCC-----HHC
Q ss_conf 001409999999999857257625663089888982499995899839999999999919956996111000-----100
Q 000823 936 DIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSIT-----SKW 1010 (1267)
Q Consensus 936 dI~Gle~vk~~L~e~I~~pl~~~e~f~k~~~~kP~~gILL~GPpGTGKT~LAkAIA~elg~~vi~Id~seL~-----s~~ 1010 (1267)
.+.|++++++.+...+...... -....+|...+||.||+|+|||.||++||..++.+|++++|+++. +..
T Consensus 23 ~viGQ~~a~~~v~~~v~~~~~~-----l~~~~~p~~~~lf~Gp~GvGKT~lak~la~~l~~~~i~~d~s~~~~~~~~~~l 97 (315)
T d1r6bx3 23 LVFGQDKAIEALTEAIKMARAG-----LGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRL 97 (315)
T ss_dssp TSCSCHHHHHHHHHHHHHHHTT-----CSCTTSCSEEEEEECSTTSSHHHHHHHHHHHHTCEEEEEEGGGCSSSSCCSSS
T ss_pred EECCHHHHHHHHHHHHHHHHCC-----CCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHH
T ss_conf 0648599999999999999726-----78888876589997787500699999998633677067415444554466652
Q ss_pred CCCCHHHHH-----HHHHHHHHCCCEEEEECCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCC-------CCCCEEE
Q ss_conf 275189999-----9999987129917999352122138999843799999988655421688656-------7776899
Q 000823 1011 FGEGEKYVK-----AVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTK-------DTERILV 1078 (1267)
Q Consensus 1011 ~Ge~ek~I~-----~iF~~A~k~~PsIIiIDEID~L~~~r~~~~~~~a~~~il~~LL~~ldgl~~~-------~~~~VlV 1078 (1267)
+|...+++. .+.....+.+.+|+++||||.. + ..+.+.|+..++....+ +-.+.++
T Consensus 98 ~g~~~gy~g~~~~~~l~~~~~~~~~~vvl~DeieKa-----~-------~~V~~~lLqild~G~ltd~~Gr~vdf~n~ii 165 (315)
T d1r6bx3 98 IGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKA-----H-------PDVFNILLQVMDNGTLTDNNGRKADFRNVVL 165 (315)
T ss_dssp CCCCSCSHHHHHTTHHHHHHHHCSSEEEEEETGGGS-----C-------HHHHHHHHHHHHHSEEEETTTEEEECTTEEE
T ss_pred CCCCCCCCCCCCCCHHHHHHHHCCCCHHHHCCCCCC-----C-------CHHHHHHHHHHCCCEECCCCCCCCCCCCEEE
T ss_conf 146787501146870337777385430221222301-----6-------3376656776214602588997268632588
Q ss_pred EEECCCC-------------------------CCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 9943999-------------------------99959998203544369999988999999999830
Q 000823 1079 LAATNRP-------------------------FDLDEAVIRRLPRRLMVNLPDAPNRAKILQVILAK 1120 (1267)
Q Consensus 1079 IaTTN~p-------------------------~~Ld~aLlrRFd~~I~v~~Pd~eeR~eILk~ll~k 1120 (1267)
|+|+|.- ..+.|+++.|++.++.|...+.++..+|+...+..
T Consensus 166 I~Tsnig~~~i~~~~~~~~~~~~~~~~~~~l~~~f~pEflnRid~ii~f~~l~~~~~~~I~~~~l~~ 232 (315)
T d1r6bx3 166 VMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVE 232 (315)
T ss_dssp EEEECSSCC-----------------CHHHHHHHSCHHHHTTCSEEEECCCCCHHHHHHHHHHHHHH
T ss_pred EECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_conf 8414401688886200000566667689999975489898663210013630155899999999999
No 24
>d1sxjb2 c.37.1.20 (B:7-230) Replication factor C4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.63 E-value=2e-14 Score=121.53 Aligned_cols=177 Identities=18% Similarity=0.195 Sum_probs=126.9
Q ss_pred CCCHHCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCC-----CEEEEECCCC
Q ss_conf 56100014099999999998572576256630898889824999958998399999999999199-----5699611100
Q 000823 932 VTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGA-----NFINISMSSI 1006 (1267)
Q Consensus 932 vt~ddI~Gle~vk~~L~e~I~~pl~~~e~f~k~~~~kP~~gILL~GPpGTGKT~LAkAIA~elg~-----~vi~Id~seL 1006 (1267)
.+|+|++|.+++++.|+.++.. ....++||+||||+|||++|+.+|++++. .++.+++++.
T Consensus 12 ~~~~d~ig~~~~~~~L~~~~~~--------------~~~~~~ll~Gp~G~GKTt~a~~la~~l~~~~~~~~~~~~n~~~~ 77 (224)
T d1sxjb2 12 QVLSDIVGNKETIDRLQQIAKD--------------GNMPHMIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASDD 77 (224)
T ss_dssp SSGGGCCSCTHHHHHHHHHHHS--------------CCCCCEEEECSTTSSHHHHHHHHHHHHHGGGHHHHEEEECTTSC
T ss_pred CCHHHHCCCHHHHHHHHHHHHC--------------CCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC
T ss_conf 9899902979999999999986--------------99874999889998705469999999725664322111113455
Q ss_pred CHHCCCCCHHHHHHHHHHHHH-------CCCEEEEECCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEE
Q ss_conf 010027518999999999871-------2991799935212213899984379999998865542168865677768999
Q 000823 1007 TSKWFGEGEKYVKAVFSLASK-------IAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDTERILVL 1079 (1267)
Q Consensus 1007 ~s~~~Ge~ek~I~~iF~~A~k-------~~PsIIiIDEID~L~~~r~~~~~~~a~~~il~~LL~~ldgl~~~~~~~VlVI 1079 (1267)
.+. ..+...+..... ....|++|||+|.+. . ...+.++..+.. ......++
T Consensus 78 ~~~------~~i~~~~~~~~~~~~~~~~~~~kviiiDe~d~~~-----~-------~~~~~ll~~~e~----~~~~~~~i 135 (224)
T d1sxjb2 78 RGI------DVVRNQIKHFAQKKLHLPPGKHKIVILDEADSMT-----A-------GAQQALRRTMEL----YSNSTRFA 135 (224)
T ss_dssp CSH------HHHHTHHHHHHHBCCCCCTTCCEEEEEESGGGSC-----H-------HHHHTTHHHHHH----TTTTEEEE
T ss_pred CCC------EEHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCC-----H-------HHHHHHHHHCCC----CCCCEEEE
T ss_conf 785------2116678878876224777635999982443232-----1-------577877520112----33333665
Q ss_pred EECCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC-CCCCHHHHHHHCCCCCHHHHHHHHH
Q ss_conf 943999999599982035443699999889999999998307999-9030999999827998999999776
Q 000823 1080 AATNRPFDLDEAVIRRLPRRLMVNLPDAPNRAKILQVILAKEDLS-PDVDFDAIANMTDGYSGSDLKVIFL 1149 (1267)
Q Consensus 1080 aTTN~p~~Ld~aLlrRFd~~I~v~~Pd~eeR~eILk~ll~k~~l~-~didl~~LA~~TeGySg~DLk~LI~ 1149 (1267)
.+++....+.+++++|| ..|.|+.|+.++...++..++.++++. ++..++.++....| |++.+++
T Consensus 136 ~~~~~~~~i~~~l~sr~-~~i~~~~~~~~~i~~~l~~i~~~e~~~i~~~~l~~I~~~s~G----d~R~ai~ 201 (224)
T d1sxjb2 136 FACNQSNKIIEPLQSQC-AILRYSKLSDEDVLKRLLQIIKLEDVKYTNDGLEAIIFTAEG----DMRQAIN 201 (224)
T ss_dssp EEESCGGGSCHHHHTTS-EEEECCCCCHHHHHHHHHHHHHHHTCCBCHHHHHHHHHHHTT----CHHHHHH
T ss_pred ECCCCHHHHHHHHHHHH-HHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCC----CHHHHHH
T ss_conf 31474302106788777-776531332245678887777740467899999999998699----6999999
No 25
>d1sxje2 c.37.1.20 (E:4-255) Replication factor C5 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.62 E-value=3.3e-14 Score=119.83 Aligned_cols=188 Identities=15% Similarity=0.249 Sum_probs=120.2
Q ss_pred CCCCHHCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHC---CCEEEEECCCC-
Q ss_conf 75610001409999999999857257625663089888982499995899839999999999919---95699611100-
Q 000823 931 GVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAG---ANFINISMSSI- 1006 (1267)
Q Consensus 931 ~vt~ddI~Gle~vk~~L~e~I~~pl~~~e~f~k~~~~kP~~gILL~GPpGTGKT~LAkAIA~elg---~~vi~Id~seL- 1006 (1267)
..+|+|++|.+++++.|+.++.. ...+.++||+||||+|||++|+++|+++. .....++....
T Consensus 7 P~~~~diig~~~~~~~L~~~~~~-------------~~~~~~lll~Gp~G~GKTt~~~~la~~l~~~~~~~~~~~~~~~~ 73 (252)
T d1sxje2 7 PKSLNALSHNEELTNFLKSLSDQ-------------PRDLPHLLLYGPNGTGKKTRCMALLESIFGPGVYRLKIDVRQFV 73 (252)
T ss_dssp CCSGGGCCSCHHHHHHHHTTTTC-------------TTCCCCEEEECSTTSSHHHHHHTHHHHHSCTTCCC---------
T ss_pred CCCHHHCCCCHHHHHHHHHHHHC-------------CCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC
T ss_conf 89798835839999999999976-------------99878599889999988999999997622764222221234443
Q ss_pred --------------------CHHCCCCCHH-HHHHHHHHHH--------------HCCCEEEEECCCHHHHCCCCCCCHH
Q ss_conf --------------------0100275189-9999999987--------------1299179993521221389998437
Q 000823 1007 --------------------TSKWFGEGEK-YVKAVFSLAS--------------KIAPSVIFVDEVDSMLGRRENPGEH 1051 (1267)
Q Consensus 1007 --------------------~s~~~Ge~ek-~I~~iF~~A~--------------k~~PsIIiIDEID~L~~~r~~~~~~ 1051 (1267)
.....+.... .+........ .....+++|||+|.+. ....
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iiiide~d~l~-----~~~~ 148 (252)
T d1sxje2 74 TASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQMEQVDFQDSKDGLAHRYKCVIINEANSLT-----KDAQ 148 (252)
T ss_dssp ---------CCEECSSEEEECCC----CCHHHHHHHHHHHTTTTC------------CCEEEEEECTTSSC-----HHHH
T ss_pred CCCCCHHHHHHCCCCCCCEEEECCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCC-----CCCC
T ss_conf 46663112211047763100001044577522431022343433100121146667872499942433345-----4311
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC--CCCCH
Q ss_conf 9999998865542168865677768999943999999599982035443699999889999999998307999--90309
Q 000823 1052 EAMRKMKNEFMVNWDGLRTKDTERILVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNRAKILQVILAKEDLS--PDVDF 1129 (1267)
Q Consensus 1052 ~a~~~il~~LL~~ldgl~~~~~~~VlVIaTTN~p~~Ld~aLlrRFd~~I~v~~Pd~eeR~eILk~ll~k~~l~--~didl 1129 (1267)
+.++..++. ...++.+|++||.++.+.+.+++|| ..|+|+.|+.++..+++..++..+++. .+.-+
T Consensus 149 -------~~l~~~~e~----~~~~~~~Il~tn~~~~i~~~l~sR~-~~i~~~~~~~~~~~~~l~~i~~~e~~~~~~~~~l 216 (252)
T d1sxje2 149 -------AALRRTMEK----YSKNIRLIMVCDSMSPIIAPIKSQC-LLIRCPAPSDSEISTILSDVVTNERIQLETKDIL 216 (252)
T ss_dssp -------HHHHHHHHH----STTTEEEEEEESCSCSSCHHHHTTS-EEEECCCCCHHHHHHHHHHHHHHHTCEECCSHHH
T ss_pred -------HHHHCCCCC----CCCCCCCEEEECCCCCHHHHHHCCH-HEEEECCCCHHHHHHHHHHHHHHCCCCCCCHHHH
T ss_conf -------122100221----3566430001021110025442100-0243035330468999999999839998969999
Q ss_pred HHHHHHCCCCCHHHHHHHHHHHH
Q ss_conf 99999827998999999776434
Q 000823 1130 DAIANMTDGYSGSDLKVIFLSHS 1152 (1267)
Q Consensus 1130 ~~LA~~TeGySg~DLk~LI~~a~ 1152 (1267)
+.++..+.| |++++++..+
T Consensus 217 ~~i~~~s~G----d~R~ai~~Lq 235 (252)
T d1sxje2 217 KRIAQASNG----NLRVSLLMLE 235 (252)
T ss_dssp HHHHHHHTT----CHHHHHHHHT
T ss_pred HHHHHHCCC----CHHHHHHHHH
T ss_conf 999998699----4999999999
No 26
>d1r6bx2 c.37.1.20 (X:169-436) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=99.62 E-value=2.7e-13 Score=113.06 Aligned_cols=163 Identities=21% Similarity=0.381 Sum_probs=125.5
Q ss_pred CHHCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHH----------CCCEEEEEC
Q ss_conf 1000140999999999985725762566308988898249999589983999999999991----------995699611
Q 000823 934 FDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEA----------GANFINISM 1003 (1267)
Q Consensus 934 ~ddI~Gle~vk~~L~e~I~~pl~~~e~f~k~~~~kP~~gILL~GPpGTGKT~LAkAIA~el----------g~~vi~Id~ 1003 (1267)
++.+.|.++..+++.+.+.. +...++||.||||+|||+++..+|... +..++.+++
T Consensus 17 ld~~igRd~Ei~~l~~iL~r--------------~~k~n~lLVG~~GvGKTalv~~la~ri~~~~vp~~l~~~~i~~l~~ 82 (268)
T d1r6bx2 17 IDPLIGREKELERAIQVLCR--------------RRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDI 82 (268)
T ss_dssp SCCCCSCHHHHHHHHHHHTS--------------SSSCEEEEECCTTSSHHHHHHHHHHHHHHTCSCGGGTTCEEEECCC
T ss_pred CCCCCCHHHHHHHHHHHHHC--------------CCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEE
T ss_conf 98663809999999999954--------------7668967988898867799999999998178450003541278640
Q ss_pred CCCCH--HCCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEE
Q ss_conf 10001--0027518999999999871299179993521221389998437999999886554216886567776899994
Q 000823 1004 SSITS--KWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDTERILVLAA 1081 (1267)
Q Consensus 1004 seL~s--~~~Ge~ek~I~~iF~~A~k~~PsIIiIDEID~L~~~r~~~~~~~a~~~il~~LL~~ldgl~~~~~~~VlVIaT 1081 (1267)
..+++ ++.|+.+..+..++..+.+....|+||||++.|++.....+.......++..++ ....+.+|++
T Consensus 83 ~~liag~~~~g~~e~r~~~i~~~~~~~~~iIlfiDeih~l~~~g~~~g~~~d~a~~Lkp~L---------~rg~i~vIga 153 (268)
T d1r6bx2 83 GSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLL---------SSGKIRVIGS 153 (268)
T ss_dssp C---CCCCCSSCHHHHHHHHHHHHSSSSCEEEEETTTTTTTTSCCSSSCHHHHHHHHSSCS---------SSCCCEEEEE
T ss_pred CHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHCCCCCCCCCCCHHHHHHHHH---------HCCCCEEEEE
T ss_conf 5675067630058999999999861267846884336988627777886411798764887---------4798759995
Q ss_pred CCC-----CCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 399-----999959998203544369999988999999999830
Q 000823 1082 TNR-----PFDLDEAVIRRLPRRLMVNLPDAPNRAKILQVILAK 1120 (1267)
Q Consensus 1082 TN~-----p~~Ld~aLlrRFd~~I~v~~Pd~eeR~eILk~ll~k 1120 (1267)
|.. ...-|++|.+|| ..|.+..|+.++-.+|++.+...
T Consensus 154 tT~eey~~~~e~d~al~rrF-~~I~V~Eps~e~t~~IL~~~~~~ 196 (268)
T d1r6bx2 154 TTYQEFSNIFEKDRALARRF-QKIDITEPSIEETVQIINGLKPK 196 (268)
T ss_dssp ECHHHHHCCCCCTTSSGGGE-EEEECCCCCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHCHHHHHHH-CCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 79999999986167888652-10036898999999999986688
No 27
>d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal domain {Aeropyrum pernix [TaxId: 56636]}
Probab=99.58 E-value=1.9e-13 Score=114.11 Aligned_cols=233 Identities=13% Similarity=0.010 Sum_probs=135.5
Q ss_pred HHCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHC---------CCEEEEECCC
Q ss_conf 0001409999999999857257625663089888982499995899839999999999919---------9569961110
Q 000823 935 DDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAG---------ANFINISMSS 1005 (1267)
Q Consensus 935 ddI~Gle~vk~~L~e~I~~pl~~~e~f~k~~~~kP~~gILL~GPpGTGKT~LAkAIA~elg---------~~vi~Id~se 1005 (1267)
+.+.+-+...+.|...+..+... ..+...+...++|+||||||||++++++++++. ..++.+++..
T Consensus 16 ~~~~~Re~e~~~l~~~l~~~~~~-----~~~~~~~~~~l~l~GppGtGKT~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 90 (287)
T d1w5sa2 16 PELRVRRGEAEALARIYLNRLLS-----GAGLSDVNMIYGSIGRVGIGKTTLAKFTVKRVSEAAAKEGLTVKQAYVNAFN 90 (287)
T ss_dssp SSCSSSCHHHHHHHHHHHHHHHT-----SSCBCCEEEEEECTTCCSSSHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGG
T ss_pred CCCCCHHHHHHHHHHHHHHHHHC-----CCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCC
T ss_conf 98887899999999999999974-----9988885348996789998999999999999875415556784166303333
Q ss_pred CCHH----------------CCCCCHHHHHHHHH-HHH-HCCCEEEEECCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCC
Q ss_conf 0010----------------02751899999999-987-12991799935212213899984379999998865542168
Q 000823 1006 ITSK----------------WFGEGEKYVKAVFS-LAS-KIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDG 1067 (1267)
Q Consensus 1006 L~s~----------------~~Ge~ek~I~~iF~-~A~-k~~PsIIiIDEID~L~~~r~~~~~~~a~~~il~~LL~~ldg 1067 (1267)
.... ..+.....+...+. ... ...+.++++|++|.+....... ... ...+..++..+..
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iide~d~l~~~~~~~--~~~-~~~l~~l~~~l~~ 167 (287)
T d1w5sa2 91 APNLYTILSLIVRQTGYPIQVRGAPALDILKALVDNLYVENHYLLVILDEFQSMLSSPRIA--AED-LYTLLRVHEEIPS 167 (287)
T ss_dssp CCSHHHHHHHHHHHHTCCCCCTTCCHHHHHHHHHHHHHHHTCEEEEEEESTHHHHSCTTSC--HHH-HHHHHTHHHHSCC
T ss_pred CCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCC--HHH-HHHHHHHHHHCCH
T ss_conf 4650467888765304323334512788999999999854676654125788851566554--267-8988999874320
Q ss_pred CCCCCCCCEEEEEECCCCCC------CCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC---CCCCHHHHHHHCCC
Q ss_conf 86567776899994399999------9599982035443699999889999999998307999---90309999998279
Q 000823 1068 LRTKDTERILVLAATNRPFD------LDEAVIRRLPRRLMVNLPDAPNRAKILQVILAKEDLS---PDVDFDAIANMTDG 1138 (1267)
Q Consensus 1068 l~~~~~~~VlVIaTTN~p~~------Ld~aLlrRFd~~I~v~~Pd~eeR~eILk~ll~k~~l~---~didl~~LA~~TeG 1138 (1267)
.. ...++.+|+.++.+.. ..+.+.+||...++|+.|+.+++.+|++..+...... .+..++.+|+.+..
T Consensus 168 ~~--~~~~~~~i~i~~~~~~~~~~~~~~~~~~~r~~~~i~f~~y~~~el~~Il~~r~~~~~~~~~~~~~al~~ia~~~~~ 245 (287)
T d1w5sa2 168 RD--GVNRIGFLLVASDVRALSYMREKIPQVESQIGFKLHLPAYKSRELYTILEQRAELGLRDTVWEPRHLELISDVYGE 245 (287)
T ss_dssp TT--SCCBEEEEEEEEETHHHHHHHHHCHHHHTTCSEEEECCCCCHHHHHHHHHHHHHHHBCTTSCCHHHHHHHHHHHCG
T ss_pred HH--CCCCEEEEEECCCHHHHHHHHHHCCCHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHC
T ss_conf 10--4565147762430899999986252011232206522577599999987666777524687799999999999723
Q ss_pred CC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 98--9999997764344777875333456799999999999999999999999999899999886419999987798887
Q 000823 1139 YS--GSDLKVIFLSHSLICNVLLLNLWSDWLLVYLIVLQNLCVTAAHRPIKEILEKEKKERAAAMAEGKPAPALSGCADI 1216 (1267)
Q Consensus 1139 yS--g~DLk~LI~~a~li~~v~~~~~l~~~i~~~l~~l~~Lc~~Aa~~aire~l~~~k~~~~~a~~e~~~~~~~~~~~~~ 1216 (1267)
|. .+|++.+ .++|+.|+..+..+ +.
T Consensus 246 ~~~~~gd~R~a---------------------------i~~l~~a~~~A~~~--------------------------~~ 272 (287)
T d1w5sa2 246 DKGGDGSARRA---------------------------IVALKMACEMAEAM--------------------------GR 272 (287)
T ss_dssp GGTSCCCHHHH---------------------------HHHHHHHHHHHHHT--------------------------TC
T ss_pred CCCCCCCHHHH---------------------------HHHHHHHHHHHHHC--------------------------CC
T ss_conf 03678899999---------------------------99999999999984--------------------------99
Q ss_pred CCCCHHHHHHHHHH
Q ss_conf 66679999999998
Q 000823 1217 RPLNMDDFKYAHER 1230 (1267)
Q Consensus 1217 ~~Vt~eDf~~Al~~ 1230 (1267)
..|+.+|+++|+++
T Consensus 273 ~~It~~~V~~A~~e 286 (287)
T d1w5sa2 273 DSLSEDLVRKAVSE 286 (287)
T ss_dssp SSCCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHC
T ss_conf 98799999999846
No 28
>d1um8a_ c.37.1.20 (A:) ClpX {Helicobacter pylori [TaxId: 210]}
Probab=99.58 E-value=2.3e-14 Score=121.07 Aligned_cols=181 Identities=20% Similarity=0.296 Sum_probs=123.9
Q ss_pred HCCCCHHHHHHHHHHHHCCCCCHHHHHC----------------CCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEE
Q ss_conf 0014099999999998572576256630----------------898889824999958998399999999999199569
Q 000823 936 DIGALENVKDTLKELVMLPLQRPELFCK----------------GQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFI 999 (1267)
Q Consensus 936 dI~Gle~vk~~L~e~I~~pl~~~e~f~k----------------~~~~kP~~gILL~GPpGTGKT~LAkAIA~elg~~vi 999 (1267)
-++|+++.++.+-..+....++...-.+ .....|+.++||.||+|||||.||+++|..++.+|+
T Consensus 18 ~ViGQd~Akkava~Avrn~~rR~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~niLfiGPTGvGKTElAk~LA~~~~~~~i 97 (364)
T d1um8a_ 18 YVIGQEQAKKVFSVAVYNHYKRLSFKEKLKKQDNQDSNVELEHLEEVELSKSNILLIGPTGSGKTLMAQTLAKHLDIPIA 97 (364)
T ss_dssp TCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHTTCCCCCEEEECCTTSSHHHHHHHHHHHTTCCEE
T ss_pred EECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCEE
T ss_conf 62380899999999999899888778876404444331111223345678753244189986378999999864435331
Q ss_pred EEECCCCCH-HCCCCC-HHHHHHHHHH----HHHCCCEEEEECCCHHHHCCCCCCC--HHHHHHHHHHHHHHHCCCCCC-
Q ss_conf 961110001-002751-8999999999----8712991799935212213899984--379999998865542168865-
Q 000823 1000 NISMSSITS-KWFGEG-EKYVKAVFSL----ASKIAPSVIFVDEVDSMLGRRENPG--EHEAMRKMKNEFMVNWDGLRT- 1070 (1267)
Q Consensus 1000 ~Id~seL~s-~~~Ge~-ek~I~~iF~~----A~k~~PsIIiIDEID~L~~~r~~~~--~~~a~~~il~~LL~~ldgl~~- 1070 (1267)
+++|+++.. .|.|.. ...+..+... .++.+.+|+++||||...+...... ...++..+.+.|++.+++...
T Consensus 98 r~D~s~~~e~gyvg~dv~~~i~~l~~~~~~~v~~~~~~iv~lDEieK~~~~s~~~~~~~d~a~~~V~~~lLqild~~~~~ 177 (364)
T d1um8a_ 98 ISDATSLTEAGYVGEDVENILTRLLQASDWNVQKAQKGIVFIDEIDKISRLSENRSITRDVSGEGVQQALLKIVEGSLVN 177 (364)
T ss_dssp EEEGGGCC--------CTHHHHHHHHHTTTCHHHHTTSEEEEETGGGC--------------CHHHHHHHHHHHHCCEEC
T ss_pred EHHHHHCCCCHHHHHHHCCCHHHHHHHCHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEC
T ss_conf 11222014431667631210344542024589986546301016665313454455551221438898645540586122
Q ss_pred --------CCCCCEEEEEECCC-------------------------------------------------CCCCCHHHH
Q ss_conf --------67776899994399-------------------------------------------------999959998
Q 000823 1071 --------KDTERILVLAATNR-------------------------------------------------PFDLDEAVI 1093 (1267)
Q Consensus 1071 --------~~~~~VlVIaTTN~-------------------------------------------------p~~Ld~aLl 1093 (1267)
.+..+.+++.|+|- +..+.|+|+
T Consensus 178 ~~~~~gr~~~~~~~i~i~t~~i~~~~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~PEf~ 257 (364)
T d1um8a_ 178 IPPKGGRKHPEGNFIQIDTSDILFICAGAFDGLAEIIKKRTTQNVLGFTQEKMSKKEQEAILHLVQTHDLVTYGLIPELI 257 (364)
T ss_dssp ---------------CEECTTCEEEEEECCTTHHHHTTTSCSSCCCSCCCSSCCTTTTTTSGGGCCHHHHHHTTCCHHHH
T ss_pred CCCCCCCCCCCCEEEEEEEHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHH
T ss_conf 58777876776416899611345541113101456654301445431000110012466653024578776530079999
Q ss_pred HCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 20354436999998899999999
Q 000823 1094 RRLPRRLMVNLPDAPNRAKILQV 1116 (1267)
Q Consensus 1094 rRFd~~I~v~~Pd~eeR~eILk~ 1116 (1267)
.||+.++.|...+.++..+|+..
T Consensus 258 gRi~~iv~f~~L~~~~l~~Il~~ 280 (364)
T d1um8a_ 258 GRLPVLSTLDSISLEAMVDILQK 280 (364)
T ss_dssp TTCCEEEECCCCCHHHHHHHHHS
T ss_pred HHHCCHHHHHHHHHHHHHHHHHH
T ss_conf 87230155740209999999987
No 29
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=99.56 E-value=1.4e-17 Score=145.05 Aligned_cols=148 Identities=18% Similarity=0.263 Sum_probs=120.7
Q ss_pred HHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHC-----CCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCC
Q ss_conf 799999999998630147984999725043413-----894225678998721999489994103578833458999862
Q 000823 673 DKLLINTLFEVVFSESRSCPFILFMKDAEKSIA-----GNSDSYSTFKSRLEKLPDKVIVIGSHTHTDNRKEKSHPGGLL 747 (1267)
Q Consensus 673 ~k~~i~~L~ev~~~~~~~~p~Ilfi~di~~~l~-----g~~~~~~~lk~~L~~l~g~vvvIGs~~~~d~~~~~~~~~~~~ 747 (1267)
++++..-+.++... .+++||||||+|.+++ |++++.+.|||+|.+ |.+.|||+||..+|++
T Consensus 100 e~r~~~i~~~~~~~---~~~~ilfide~h~l~~~g~~~g~~d~a~~Lkp~L~r--g~~~~I~~tT~~ey~~--------- 165 (387)
T d1qvra2 100 EERLKAVIQEVVQS---QGEVILFIDELHTVVGAGKAEGAVDAGNMLKPALAR--GELRLIGATTLDEYRE--------- 165 (387)
T ss_dssp HHHHHHHHHHHHTT---CSSEEEEECCC-------------------HHHHHT--TCCCEEEEECHHHHHH---------
T ss_pred HHHHHHHHHHHCCC---CCCEEEEECCHHHHHCCCCCCCCCCHHHHHHHHHHC--CCCCEEEECCHHHHHH---------
T ss_conf 99999999985058---996698724088884277787741389999999737--8851666368999987---------
Q ss_pred CCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
Q ss_conf 01347731111013578843443335787036788984208973997079878899999985465566642026740688
Q 000823 748 FTKFGSNQTALLDLAFPDSFGRLHDRGKEIPKATKLLTKLFPNKVTIHMPQDEALLASWKHQLDRDSETLKMKGNLNHLR 827 (1267)
Q Consensus 748 l~~~g~~~~~l~d~a~~~~~~r~~~~~~~~~~~d~~l~rlFp~~IeI~LPdeE~RL~Ilk~qLek~~k~l~~~~Nv~~l~ 827 (1267)
|.+ |.+|.||| ++|.|.+|+.+....|++..... +..+|++....
T Consensus 166 -------------------~e~-----------d~al~rrF-~~v~v~ep~~~~~~~il~~~~~~----~e~~h~v~~~~ 210 (387)
T d1qvra2 166 -------------------IEK-----------DPALERRF-QPVYVDEPTVEETISILRGLKEK----YEVHHGVRISD 210 (387)
T ss_dssp -------------------HTT-----------CTTTCSCC-CCEEECCCCHHHHHHHHHHHHHH----HHHHTTCEECH
T ss_pred -------------------HCC-----------CHHHHHHC-CCCCCCCCCHHHHHHHHHHHHHH----HHHCCCCCCCH
T ss_conf -------------------633-----------67999824-61127998678899999999999----87404774669
Q ss_pred HHHHHCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 8865249987663231012334465999999999997332049999
Q 000823 828 TVLGRSGLECEGLETLCIRDQSLTNESAEKIVGWALSHHLMQNPEA 873 (1267)
Q Consensus 828 ~vL~~~glsgaDLe~L~~~d~~ls~~aIe~iv~~A~s~~l~~~~~p 873 (1267)
.++.. +++|...|+.++.+|++||+.+...++...+.....|
T Consensus 211 ~ai~~----~v~ls~ryi~~r~~PdKAidlld~a~a~~~i~~~s~P 252 (387)
T d1qvra2 211 SAIIA----AATLSHRYITERRLPDKAIDLIDEAAARLRMALESAP 252 (387)
T ss_dssp HHHHH----HHHHHHHHCCSSCTHHHHHHHHHHHHHHHHHTTTTHH
T ss_pred HHHHH----HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 99999----9985023666566704688999999999986415895
No 30
>d1g8pa_ c.37.1.20 (A:) ATPase subunit of magnesium chelatase, BchI {Rhodobacter capsulatus [TaxId: 1061]}
Probab=99.55 E-value=8.7e-14 Score=116.72 Aligned_cols=261 Identities=19% Similarity=0.257 Sum_probs=140.2
Q ss_pred CCCHHCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHC----------------
Q ss_conf 5610001409999999999857257625663089888982499995899839999999999919----------------
Q 000823 932 VTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAG---------------- 995 (1267)
Q Consensus 932 vt~ddI~Gle~vk~~L~e~I~~pl~~~e~f~k~~~~kP~~gILL~GPpGTGKT~LAkAIA~elg---------------- 995 (1267)
..|.+|.|++.+|..|.-.+..+ ..+++||.||||||||++|++++..+.
T Consensus 4 ~~f~~I~Gq~~~kral~laa~~~--------------~~h~vLl~G~pG~GKT~lar~~~~iLp~~~~~~~~~~~~~~~~ 69 (333)
T d1g8pa_ 4 FPFSAIVGQEDMKLALLLTAVDP--------------GIGGVLVFGDRGTGKSTAVRALAALLPEIEAVEGCPVSSPNVE 69 (333)
T ss_dssp CCGGGSCSCHHHHHHHHHHHHCG--------------GGCCEEEECCGGGCTTHHHHHHHHHSCCEEEETTCTTCCSSGG
T ss_pred CCHHHCCCCHHHHHHHHHHHHCC--------------CCCEEEEECCCCCCHHHHHHHHHHHCCCCHHHCCCCCCCCCCC
T ss_conf 98514069499999999997646--------------9970899889985299999999873798215405753467534
Q ss_pred -----------------CCEEEEECCCCCHHCCCCC--HHHHH--------HHHHHHHHCCCEEEEECCCHHHHCCCCCC
Q ss_conf -----------------9569961110001002751--89999--------99999871299179993521221389998
Q 000823 996 -----------------ANFINISMSSITSKWFGEG--EKYVK--------AVFSLASKIAPSVIFVDEVDSMLGRRENP 1048 (1267)
Q Consensus 996 -----------------~~vi~Id~seL~s~~~Ge~--ek~I~--------~iF~~A~k~~PsIIiIDEID~L~~~r~~~ 1048 (1267)
.+++......-.+..+|.. ..... ..+..|. .+|+|||||+.+ ..
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~~~~g~~~~~~G~l~~A~---~gvl~iDEi~~~-----~~ 141 (333)
T d1g8pa_ 70 MIPDWATVLSTNVIRKPTPVVDLPLGVSEDRVVGALDIERAISKGEKAFEPGLLARAN---RGYLYIDECNLL-----ED 141 (333)
T ss_dssp GSCTTCCCSCCCEEEECCCEEEECTTCCHHHHHCEECHHHHHHHCGGGEECCHHHHHT---TEEEEETTGGGS-----CH
T ss_pred CCCCHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHCCCCCCCEEECCCCCCCC---CCEEECCCHHHH-----HH
T ss_conf 4620220124575212375242367788543557410211023686022025311355---637631537777-----79
Q ss_pred CHHHHHHHHHHHHHHHC--CCCCCCCCCCEEEEEECCCC-CCCCHHHHHCCCCCCCCCCC-CHHHHHHHHHHHHHHCCCC
Q ss_conf 43799999988655421--68865677768999943999-99959998203544369999-9889999999998307999
Q 000823 1049 GEHEAMRKMKNEFMVNW--DGLRTKDTERILVLAATNRP-FDLDEAVIRRLPRRLMVNLP-DAPNRAKILQVILAKEDLS 1124 (1267)
Q Consensus 1049 ~~~~a~~~il~~LL~~l--dgl~~~~~~~VlVIaTTN~p-~~Ld~aLlrRFd~~I~v~~P-d~eeR~eILk~ll~k~~l~ 1124 (1267)
....++...+++-...+ .+....-+.++++|+|+|.. ..+.+++++||+..+.+..| +...+.++......... .
T Consensus 142 ~~~~aLl~~me~~~v~i~r~g~~~~~p~~f~liaa~Np~~~~l~~~llDRf~~~i~v~~~~~~~~~~~~~~~~~~~~~-~ 220 (333)
T d1g8pa_ 142 HIVDLLLDVAQSGENVVERDGLSIRHPARFVLVGSGNPEEGDLRPQLLDRFGLSVEVLSPRDVETRVEVIRRRDTYDA-D 220 (333)
T ss_dssp HHHHHHHHHHHHSEEEECCTTCCEEEECCEEEEEEECSCSCCCCHHHHTTCSEEEECCCCCSHHHHHHHHHHHHHHHH-C
T ss_pred HHHHHHHHHHCCCEEEECCCCCEECCCCCEEEEEECCCCCCCCCCCHHHHHCCEEECCCCCHHHHHHHHHHHHHHCCC-C
T ss_conf 999987445307768751358430488887999845763123663103241334432686403578887776541022-7
Q ss_pred CCCCHHHHHHHCCCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 903099999982799899999-9776434477787533345679999999999999999999999999989999988641
Q 000823 1125 PDVDFDAIANMTDGYSGSDLK-VIFLSHSLICNVLLLNLWSDWLLVYLIVLQNLCVTAAHRPIKEILEKEKKERAAAMAE 1203 (1267)
Q Consensus 1125 ~didl~~LA~~TeGySg~DLk-~LI~~a~li~~v~~~~~l~~~i~~~l~~l~~Lc~~Aa~~aire~l~~~k~~~~~a~~e 1203 (1267)
........... ..++. ++......+..+.... .... ..............|......+.+++.|..+
T Consensus 221 ~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~v~~~~----~~~~---~~~~~~~~~~~~S~R~~~~llrvArtiA~L~ 288 (333)
T d1g8pa_ 221 PKAFLEEWRPK-----DMDIRNQILEARERLPKVEAPN----TALY---DCAALCIALGSDGLRGELTLLRSARALAALE 288 (333)
T ss_dssp HHHHHHHHHHH-----HHHHHHHHHHHHHHGGGCBCCH----HHHH---HHHHHHHHSSSCSHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHH-----HHHHHHHHHHHHHCCCCEECCH----HHHH---HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHC
T ss_conf 57788888999-----9999988888752113120589----9999---9999999708988379999999999999976
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCC
Q ss_conf 99999877988876667999999999803465654
Q 000823 1204 GKPAPALSGCADIRPLNMDDFKYAHERVCASVSSE 1238 (1267)
Q Consensus 1204 ~~~~~~~~~~~~~~~Vt~eDf~~Al~~v~pS~s~~ 1238 (1267)
++ ..|+.+|+.+|+..+..+....
T Consensus 289 gr-----------~~V~~~di~~a~~lvL~hR~~~ 312 (333)
T d1g8pa_ 289 GA-----------TAVGRDHLKRVATMALSHRLRR 312 (333)
T ss_dssp TC-----------SBCCHHHHHHHHHHHHGGGCC-
T ss_pred CC-----------CCCCHHHHHHHHHHHHHHHCCC
T ss_conf 98-----------9989999999999987765548
No 31
>d1svma_ c.37.1.20 (A:) Papillomavirus large T antigen helicase domain {Simian virus 40 [TaxId: 10633]}
Probab=99.51 E-value=5.6e-16 Score=133.05 Aligned_cols=161 Identities=16% Similarity=0.135 Sum_probs=101.8
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCCCHHC-CCCCHHHHHHHHHHH------HHCCCEEEEECCCHHHHC
Q ss_conf 2499995899839999999999919956996111000100-275189999999998------712991799935212213
Q 000823 971 KGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKW-FGEGEKYVKAVFSLA------SKIAPSVIFVDEVDSMLG 1043 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkAIA~elg~~vi~Id~seL~s~~-~Ge~ek~I~~iF~~A------~k~~PsIIiIDEID~L~~ 1043 (1267)
+++||+||||||||++|+++|+.++.+|+.+++++..+.+ .+........+|+.| .+..|+++++||||.|..
T Consensus 155 ~~~~~~g~~~~gk~~~~~~~~~~~~~~~i~in~s~~rs~~~l~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~DeiD~l~~ 234 (362)
T d1svma_ 155 RYWLFKGPIDSGKTTLAAALLELCGGKALNVNLPLDRLNFELGVAIDQFLVVFEDVKGTGGESRDLPSGQGINNLDNLRD 234 (362)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHHHCCEEECCSSCTTTHHHHHGGGTTCSCEEETTCCCSTTTTTTCCCCSHHHHHHTTHH
T ss_pred CEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHCCC
T ss_conf 76999899998889999999998599789997742011888875777799899999876541068997288750731134
Q ss_pred CCCCCCHHHHHHHHHHHHHHHCCCCCCC--CCCCEEEEEECCCCCCCCHHHHH-CCCCCCCCCCCCHHHH-HHHHHHHHH
Q ss_conf 8999843799999988655421688656--77768999943999999599982-0354436999998899-999999983
Q 000823 1044 RRENPGEHEAMRKMKNEFMVNWDGLRTK--DTERILVLAATNRPFDLDEAVIR-RLPRRLMVNLPDAPNR-AKILQVILA 1119 (1267)
Q Consensus 1044 ~r~~~~~~~a~~~il~~LL~~ldgl~~~--~~~~VlVIaTTN~p~~Ld~aLlr-RFd~~I~v~~Pd~eeR-~eILk~ll~ 1119 (1267)
.+++ .....++..... ....-.+|+|||... .+.++. ||+..+.+..|+...| .+++..++.
T Consensus 235 ~~dg------------~~~~~~~~~~~~~~~~~~~p~i~ttN~~~--~~~~r~~Rf~~~i~~~~~~~~~~~~~~l~~i~~ 300 (362)
T d1svma_ 235 YLDG------------SVKVNLEKKHLNKRTQIFPPGIVTMNEYS--VPKTLQARFVKQIDFRPKDYLKHCLERSEFLLE 300 (362)
T ss_dssp HHHC------------SSCEEECCSSSCCEEECCCCEEEEECSCC--CCHHHHTTEEEEEECCCCHHHHHHHHTCTHHHH
T ss_pred CCCC------------CCHHHHHHHHHCHHHHCCCCCEEECCCCC--CCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHC
T ss_conf 5688------------60134442100245531677246506543--001224667368862689747899999999840
Q ss_pred HCCCCCCCCHHHHHHHCCCCCHHHHHHH
Q ss_conf 0799990309999998279989999997
Q 000823 1120 KEDLSPDVDFDAIANMTDGYSGSDLKVI 1147 (1267)
Q Consensus 1120 k~~l~~didl~~LA~~TeGySg~DLk~L 1147 (1267)
+..+ ..+...++.++.+++++|++.+
T Consensus 301 ~~~l--~~~~~~L~~li~~~s~~D~~~~ 326 (362)
T d1svma_ 301 KRII--QSGIALLLMLIWYRPVAEFAQS 326 (362)
T ss_dssp TTCT--TCHHHHHHHHHHHSCGGGSCGG
T ss_pred CCCC--CCCHHHHHHHCCCCCHHHHHHH
T ss_conf 3578--8888999987368987999999
No 32
>d1dmza_ b.26.1.2 (A:) Phosphotyrosine binding domain of Rad53 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.48 E-value=7.9e-14 Score=117.03 Aligned_cols=102 Identities=21% Similarity=0.237 Sum_probs=80.3
Q ss_pred CHHHCCCC--CCCCCEEEEC--CEEEECCCCCCCEEECCCCCCCCEEEEEEEEC-----------CCCEEEEEEEECCCC
Q ss_conf 01102457--8996222107--81687378885200017887642489999831-----------892189999926873
Q 000823 127 WCRLLSQS--GQNSNVPICA--SIFTVGSSRQCNFPLKDQAISAVLCKIKHVQS-----------EGSAVAMVESIGSKG 191 (1267)
Q Consensus 127 WgrL~s~~--~~~~~i~i~~--~~~tvGr~~~Cd~~l~~~~~s~~~c~i~~~~~-----------~~~~~~~Led~s~nG 191 (1267)
|-.|.+.. ...+++.|.. +.|+|||+..||++|.++.||+.||.|.+... .+...+||+|+|+||
T Consensus 5 f~~L~~l~~~~~~~~i~i~~~~~~~~iGR~~~~d~~i~~~~vS~~H~~I~~~~~~~~~~~~~~~~~~~~~~~l~D~S~NG 84 (158)
T d1dmza_ 5 FLTLKPLPDSIIQESLEIQQGVNPFFIGRSEDCNCKIEDNRLSRVHCFIFKKRHAVGKSMYESPAQGLDDIWYCHTGTNV 84 (158)
T ss_dssp CEEEEECTTSSCCCCEEETTSCSCEEEESSTTSSEECCCTTSCSSSEEEEEEECCCCCCCSSCSCSSCEEEEEEECSTTC
T ss_pred EEEEEECCCCCCCEEEEECCCCCCEEECCCCCCCEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCC
T ss_conf 69999816987530699716997679668867668979876267616999951666420012344678738998568898
Q ss_pred EEECCEEECCCCEEECCCCCEEEEEECC--CEEEEEEEC
Q ss_conf 6986846068881573489899991248--737998730
Q 000823 192 LQVNGKNLKKNTSCELRSGDEVVFGSLG--NHAYIFQQL 228 (1267)
Q Consensus 192 t~VNg~~igk~~~~~L~~gDeI~f~~~~--~~aYiF~~l 228 (1267)
|||||++++++..+.|++||+|.|.... ...+.|++.
T Consensus 85 t~vN~~~~~~~~~~~l~~gD~i~~~~~~~~~~~i~f~~~ 123 (158)
T d1dmza_ 85 SYLNNNRMIQGTKFLLQDGDEIKIIWDKNNKFVIGFKVE 123 (158)
T ss_dssp CEETTEECCSSEEEECCSSCCEESCCCTTTTCCCCEEEE
T ss_pred EEECCEECCCCCEEECCCCCEEEECCCCCCCEEEEEEEE
T ss_conf 089999937896088889999999248876468999998
No 33
>d1g41a_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=99.46 E-value=7.3e-12 Score=102.38 Aligned_cols=91 Identities=18% Similarity=0.297 Sum_probs=67.5
Q ss_pred CCCCCCCCCCCCCCCCC-HHHHHHHHHHHHHCCCCCCCCC-CCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCEE
Q ss_conf 77432332233443430-4589999988763036875112-123334689913640689705889999999985719909
Q 000823 419 DGTNLQESFENFPYYLS-ENTKNVLIAASYIHLKHKDHAK-YTSELTTVNPRILLSGPAGSEIYQEMLAKALAHYFGAKL 496 (1267)
Q Consensus 419 ~~~~~~vsf~~FPYyls-e~tk~~L~~~~~~hL~~~~~~~-~~~~L~~~s~rILLsgp~GsE~Yqe~LaKALA~~f~a~L 496 (1267)
.|++|.--.|. |++. |+.|-+|--|+|-|.+.-.+.. .-..+.+ .-|||-||+| .+++.|||+||+..+||+
T Consensus 4 tP~~i~~~Ld~--yVvGQ~~AKk~lsvav~nhyrR~~~~~~~~~ei~k--sNILliGPTG--vGKTlLAr~LAk~l~VPF 77 (443)
T d1g41a_ 4 TPREIVSELDQ--HIIGQADAKRAVAIALRNRWRRMQLQEPLRHEVTP--KNILMIGPTG--VGKTEIARRLAKLANAPF 77 (443)
T ss_dssp CHHHHHHHHHT--TCCSCHHHHHHHHHHHHHHHHHHHSCTTTTTTCCC--CCEEEECCTT--SSHHHHHHHHHHHTTCCE
T ss_pred CHHHHHHHHCC--CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC--CCEEEECCCC--CCHHHHHHHHHHHHCCCE
T ss_conf 88999998567--02280899999999999999886236544444565--6479989999--889999999998738988
Q ss_pred EEEECCCCCC-CCCHHHHHH
Q ss_conf 9983456579-986256765
Q 000823 497 LIFDSHSLLG-GLSSKEAEL 515 (1267)
Q Consensus 497 L~lD~~~~~g-~~~~~e~e~ 515 (1267)
.+.|.+.|.. |+-.+.+|+
T Consensus 78 v~~daT~fTeaGYvG~DVes 97 (443)
T d1g41a_ 78 IKVEATKFTEVGYVGKEVDS 97 (443)
T ss_dssp EEEEGGGGC----CCCCTHH
T ss_pred EEEECCEEEECCEEECCHHH
T ss_conf 98625511411111044457
No 34
>d1r6bx2 c.37.1.20 (X:169-436) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=99.45 E-value=7.3e-14 Score=117.30 Aligned_cols=161 Identities=19% Similarity=0.239 Sum_probs=122.5
Q ss_pred HHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHC------CCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCC
Q ss_conf 799999999998630147984999725043413------89422567899872199948999410357883345899986
Q 000823 673 DKLLINTLFEVVFSESRSCPFILFMKDAEKSIA------GNSDSYSTFKSRLEKLPDKVIVIGSHTHTDNRKEKSHPGGL 746 (1267)
Q Consensus 673 ~k~~i~~L~ev~~~~~~~~p~Ilfi~di~~~l~------g~~~~~~~lk~~L~~l~g~vvvIGs~~~~d~~~~~~~~~~~ 746 (1267)
++..+..+++.+. +.+++||||||+|.+++ ++.++.+.|++.|. +|.+.|||++|-.+++
T Consensus 95 ~e~r~~~i~~~~~---~~~~iIlfiDeih~l~~~g~~~g~~~d~a~~Lkp~L~--rg~i~vIgatT~eey~--------- 160 (268)
T d1r6bx2 95 FEKRFKALLKQLE---QDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLS--SGKIRVIGSTTYQEFS--------- 160 (268)
T ss_dssp HHHHHHHHHHHHS---SSSCEEEEETTTTTTTTSCCSSSCHHHHHHHHSSCSS--SCCCEEEEEECHHHHH---------
T ss_pred HHHHHHHHHHHHH---CCCCCEEEECCHHHHHCCCCCCCCCCCHHHHHHHHHH--CCCCEEEEECCHHHHH---------
T ss_conf 8999999999861---2678468843369886277778864117987648874--7987599957999999---------
Q ss_pred CCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHH
Q ss_conf 20134773111101357884344333578703678898420897399707987889999998546556664202674068
Q 000823 747 LFTKFGSNQTALLDLAFPDSFGRLHDRGKEIPKATKLLTKLFPNKVTIHMPQDEALLASWKHQLDRDSETLKMKGNLNHL 826 (1267)
Q Consensus 747 ~l~~~g~~~~~l~d~a~~~~~~r~~~~~~~~~~~d~~l~rlFp~~IeI~LPdeE~RL~Ilk~qLek~~k~l~~~~Nv~~l 826 (1267)
..+.+ |.+|.+|| ++|.|.+|+.+....|+...... +..+|++...
T Consensus 161 ------------------~~~e~-----------d~al~rrF-~~I~V~Eps~e~t~~IL~~~~~~----~e~~h~v~~~ 206 (268)
T d1r6bx2 161 ------------------NIFEK-----------DRALARRF-QKIDITEPSIEETVQIINGLKPK----YEAHHDVRYT 206 (268)
T ss_dssp ------------------CCCCC-----------TTSSGGGE-EEEECCCCCHHHHHHHHHHHHHH----HHHHHTCCCC
T ss_pred ------------------HHHHH-----------CHHHHHHH-CCCCCCCCCHHHHHHHHHHHHHH----HHCCCCEEEC
T ss_conf ------------------99861-----------67888652-10036898999999999986688----8526877857
Q ss_pred HHHHHHCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 888652499876632310123344659999999999973320499999754322350237778
Q 000823 827 RTVLGRSGLECEGLETLCIRDQSLTNESAEKIVGWALSHHLMQNPEADPDARLVLSCESIQYG 889 (1267)
Q Consensus 827 ~~vL~~~glsgaDLe~L~~~d~~ls~~aIe~iv~~A~s~~l~~~~~p~~~~kl~Is~edl~~a 889 (1267)
..++.. +.+|...|+.++.+|++||+.+...++...+..... .+..+...++...
T Consensus 207 ~~al~~----~v~ls~ryi~~~~~PdKAIdllDea~a~~~~~~~~~----~~~~i~~~di~~~ 261 (268)
T d1r6bx2 207 AKAVRA----AVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSK----RKKTVNVADIESV 261 (268)
T ss_dssp HHHHHH----HHHHHHHHCTTSCTTHHHHHHHHHHHHHHHHSSSCC----CCCSCCHHHHHHH
T ss_pred HHHHHH----HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCC----CCCCCCHHHHHHH
T ss_conf 478999----999998560478898489999999999998500246----7664799999999
No 35
>d1l8qa2 c.37.1.20 (A:77-289) Chromosomal replication initiation factor DnaA {Aquifex aeolicus [TaxId: 63363]}
Probab=99.41 E-value=3.5e-11 Score=97.28 Aligned_cols=191 Identities=19% Similarity=0.246 Sum_probs=120.7
Q ss_pred CCCCHHCC-C--CHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHH---CCCEEEEECC
Q ss_conf 75610001-4--0999999999985725762566308988898249999589983999999999991---9956996111
Q 000823 931 GVTFDDIG-A--LENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEA---GANFINISMS 1004 (1267)
Q Consensus 931 ~vt~ddI~-G--le~vk~~L~e~I~~pl~~~e~f~k~~~~kP~~gILL~GPpGTGKT~LAkAIA~el---g~~vi~Id~s 1004 (1267)
..+|++.. | .......++..+..+ + .....++|+||+|+|||+|++|+++++ +..++.+++.
T Consensus 6 ~~tFdnF~vg~~N~~a~~~~~~~~~~~----------~--~~~n~l~l~G~~G~GKTHLl~A~~~~~~~~~~~~~~~~~~ 73 (213)
T d1l8qa2 6 KYTLENFIVGEGNRLAYEVVKEALENL----------G--SLYNPIFIYGSVGTGKTHLLQAAGNEAKKRGYRVIYSSAD 73 (213)
T ss_dssp TCCSSSCCCCTTTHHHHHHHHHHHHTT----------T--TSCSSEEEECSSSSSHHHHHHHHHHHHHHTTCCEEEEEHH
T ss_pred CCCHHHCCCCCCHHHHHHHHHHHHHCC----------C--CCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEECHH
T ss_conf 897653137774999999999998676----------8--7788579988899839999999998744676504884437
Q ss_pred CCCHHCCCCCHH-HHHHHHHHHHHCCCEEEEECCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECC
Q ss_conf 000100275189-9999999987129917999352122138999843799999988655421688656777689999439
Q 000823 1005 SITSKWFGEGEK-YVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDTERILVLAATN 1083 (1267)
Q Consensus 1005 eL~s~~~Ge~ek-~I~~iF~~A~k~~PsIIiIDEID~L~~~r~~~~~~~a~~~il~~LL~~ldgl~~~~~~~VlVIaTTN 1083 (1267)
++.......... ....+++. .+ ...+|+|||||.+.++. ..+...-.+++.+. +....+|+++..
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~-~~-~~dll~iDDi~~i~~~~---~~~~~lf~lin~~~---------~~~~~iiits~~ 139 (213)
T d1l8qa2 74 DFAQAMVEHLKKGTINEFRNM-YK-SVDLLLLDDVQFLSGKE---RTQIEFFHIFNTLY---------LLEKQIILASDR 139 (213)
T ss_dssp HHHHHHHHHHHHTCHHHHHHH-HH-TCSEEEEECGGGGTTCH---HHHHHHHHHHHHHH---------HTTCEEEEEESS
T ss_pred HHHHHHHHHHHCCCHHHHHHH-HH-HCCCHHHHHHHHHCCCH---HHHHHHHHHHHHHH---------HCCCEEEEECCC
T ss_conf 879999999871662667898-76-21301011265505865---77889999999876---------316638995487
Q ss_pred CCCC---CCHHHHHCCC--CCCCCCCCCHHHHHHHHHHHHHHCCCC-CCCCHHHHHHHCCCCCHHHHHHHHHH
Q ss_conf 9999---9599982035--443699999889999999998307999-90309999998279989999997764
Q 000823 1084 RPFD---LDEAVIRRLP--RRLMVNLPDAPNRAKILQVILAKEDLS-PDVDFDAIANMTDGYSGSDLKVIFLS 1150 (1267)
Q Consensus 1084 ~p~~---Ld~aLlrRFd--~~I~v~~Pd~eeR~eILk~ll~k~~l~-~didl~~LA~~TeGySg~DLk~LI~~ 1150 (1267)
.|.. +.+.+.+||. .++.++ |+.++|.+|++.++...++. ++..++.|++.+. +.++|..++..
T Consensus 140 ~p~~l~~~~~dL~SRL~~g~~~~i~-p~d~~~~~iL~~~a~~rgl~l~~~v~~yl~~~~~--~~R~L~~~l~~ 209 (213)
T d1l8qa2 140 HPQKLDGVSDRLVSRFEGGILVEIE-LDNKTRFKIIKEKLKEFNLELRKEVIDYLLENTK--NVREIEGKIKL 209 (213)
T ss_dssp CGGGCTTSCHHHHHHHHTSEEEECC-CCHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHCS--SHHHHHHHHHH
T ss_pred CCHHCCCCCHHHHHHHHCCEEEEEC-CCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCC--CHHHHHHHHHH
T ss_conf 5100134326788886185689978-8827999999999998299999999999998568--69989999998
No 36
>d1jbka_ c.37.1.20 (A:) ClpB, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=99.39 E-value=1.4e-12 Score=107.60 Aligned_cols=156 Identities=23% Similarity=0.403 Sum_probs=114.2
Q ss_pred HHCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHH----------CCCEEEEECC
Q ss_conf 000140999999999985725762566308988898249999589983999999999991----------9956996111
Q 000823 935 DDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEA----------GANFINISMS 1004 (1267)
Q Consensus 935 ddI~Gle~vk~~L~e~I~~pl~~~e~f~k~~~~kP~~gILL~GPpGTGKT~LAkAIA~el----------g~~vi~Id~s 1004 (1267)
+.+.|.++..+++.+.+.. +...+++|.||||+|||+++..+|... +..++.++.+
T Consensus 22 d~~igRd~Ei~~l~~iL~r--------------~~k~n~lLvG~pGVGKTalv~~LA~ri~~~~vp~~L~~~~i~~ld~~ 87 (195)
T d1jbka_ 22 DPVIGRDEEIRRTIQVLQR--------------RTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMG 87 (195)
T ss_dssp CCCCSCHHHHHHHHHHHTS--------------SSSCEEEEECCTTSCHHHHHHHHHHHHHHTCSCGGGTTCEEEEECHH
T ss_pred CCCCCCHHHHHHHHHHHHC--------------CCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHCCCEEEEEEHH
T ss_conf 9872809999999999953--------------58887399835875447999999999980899978818569996699
Q ss_pred CCCH--HCCCCCHHHHHHHHHHHHHCC-CEEEEECCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEE
Q ss_conf 0001--002751899999999987129-9179993521221389998437999999886554216886567776899994
Q 000823 1005 SITS--KWFGEGEKYVKAVFSLASKIA-PSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDTERILVLAA 1081 (1267)
Q Consensus 1005 eL~s--~~~Ge~ek~I~~iF~~A~k~~-PsIIiIDEID~L~~~r~~~~~~~a~~~il~~LL~~ldgl~~~~~~~VlVIaT 1081 (1267)
.+++ ++.|+.+..+..++..+.+.. ..||||||++.+++.....+...+ ..++...| ....+.+|++
T Consensus 88 ~LiAg~~~rG~~E~rl~~il~e~~~~~~~iILfIDeih~l~~~g~~~g~~d~-~~~Lkp~L---------~rg~l~~Iga 157 (195)
T d1jbka_ 88 ALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDA-GNMLKPAL---------ARGELHCVGA 157 (195)
T ss_dssp HHHTTTCSHHHHHHHHHHHHHHHHHSTTTEEEEEETGGGGTT------CCCC-HHHHHHHH---------HTTSCCEEEE
T ss_pred HHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHCCCCCCCCCCH-HHHHHHHH---------HCCCCEEEEC
T ss_conf 9864587407799999999998731798089972608998437877775238-99999998---------5799549851
Q ss_pred CCCC-----CCCCHHHHHCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 3999-----999599982035443699999889999999
Q 000823 1082 TNRP-----FDLDEAVIRRLPRRLMVNLPDAPNRAKILQ 1115 (1267)
Q Consensus 1082 TN~p-----~~Ld~aLlrRFd~~I~v~~Pd~eeR~eILk 1115 (1267)
|... ..-|++|.+|| ..|.+..|+.++-..|++
T Consensus 158 tT~eey~~~~e~d~aL~rrF-~~I~V~Ep~~e~t~~IL~ 195 (195)
T d1jbka_ 158 TTLDEYRQYIEKDAALERRF-QKVFVAEPSVEDTIAILR 195 (195)
T ss_dssp ECHHHHHHHTTTCHHHHTTE-EEEECCCCCHHHHHTTCC
T ss_pred CCHHHHHHHHHCCHHHHHCC-CEEECCCCCHHHHHHHHC
T ss_conf 89999999987388999639-875458989899999859
No 37
>d1a5ta2 c.37.1.20 (A:1-207) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=99.38 E-value=9.8e-11 Score=93.93 Aligned_cols=168 Identities=15% Similarity=0.136 Sum_probs=113.5
Q ss_pred CCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCC---------------------
Q ss_conf 14099999999998572576256630898889824999958998399999999999199---------------------
Q 000823 938 GALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGA--------------------- 996 (1267)
Q Consensus 938 ~Gle~vk~~L~e~I~~pl~~~e~f~k~~~~kP~~gILL~GPpGTGKT~LAkAIA~elg~--------------------- 996 (1267)
..++.+.+.|...+.. .+.+.++||+||+|+|||++|+.+|+.+-.
T Consensus 5 Pw~~~~~~~l~~~~~~-------------~~l~h~lLl~Gp~G~GKtt~a~~~a~~l~~~~~~~~~~~~~~~~~~~i~~~ 71 (207)
T d1a5ta2 5 PWLRPDFEKLVASYQA-------------GRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAG 71 (207)
T ss_dssp GGGHHHHHHHHHHHHT-------------TCCCSEEEEECCTTSCHHHHHHHHHHHHTCSSCBTTBCCSCSHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHC-------------CCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHC
T ss_conf 1219999999999985-------------996737988899987599999999982101012321223342015565430
Q ss_pred ---CEEEEECCCCCHHCCCCCHHHHHHHHHHHHHC----CCEEEEECCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCC
Q ss_conf ---56996111000100275189999999998712----99179993521221389998437999999886554216886
Q 000823 997 ---NFINISMSSITSKWFGEGEKYVKAVFSLASKI----APSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLR 1069 (1267)
Q Consensus 997 ---~vi~Id~seL~s~~~Ge~ek~I~~iF~~A~k~----~PsIIiIDEID~L~~~r~~~~~~~a~~~il~~LL~~ldgl~ 1069 (1267)
.++.+....- . ..-....++.+...+... ...|++|||+|.+- ....+.|+..++..
T Consensus 72 ~~~~~~~~~~~~~-~--~~i~~~~ir~l~~~~~~~~~~~~~kviIide~d~l~------------~~a~n~Llk~lEep- 135 (207)
T d1a5ta2 72 THPDYYTLAPEKG-K--NTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLT------------DAAANALLKTLEEP- 135 (207)
T ss_dssp CCTTEEEECCCTT-C--SSBCHHHHHHHHHHTTSCCTTSSCEEEEESCGGGBC------------HHHHHHHHHHHTSC-
T ss_pred CCCCCCHHHHHHC-C--CCCCCCHHHHHHHHHHHCCCCCCCCEEEECHHHHHH------------HHHHHHHHHHHHHH-
T ss_conf 3431101234313-4--533321146776532110035764047731344200------------00149999999850-
Q ss_pred CCCCCCEEEEEECCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCHHH
Q ss_conf 56777689999439999995999820354436999998899999999983079999030999999827998999
Q 000823 1070 TKDTERILVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNRAKILQVILAKEDLSPDVDFDAIANMTDGYSGSD 1143 (1267)
Q Consensus 1070 ~~~~~~VlVIaTTN~p~~Ld~aLlrRFd~~I~v~~Pd~eeR~eILk~ll~k~~l~~didl~~LA~~TeGySg~D 1143 (1267)
+.++++|.+|+.+..+.+.+++|+ ..+.|+.|+.++...+++... .+ ++..+..++...+| +.++
T Consensus 136 ---~~~~~fIl~t~~~~~ll~tI~SRc-~~i~~~~~~~~~~~~~L~~~~---~~-~~~~~~~i~~~s~G-s~r~ 200 (207)
T d1a5ta2 136 ---PAETWFFLATREPERLLATLRSRC-RLHYLAPPPEQYAVTWLSREV---TM-SQDALLAALRLSAG-SPGA 200 (207)
T ss_dssp ---CTTEEEEEEESCGGGSCHHHHTTS-EEEECCCCCHHHHHHHHHHHC---CC-CHHHHHHHHHHTTT-CHHH
T ss_pred ---CCCCEEEEEECCHHHHHHHHCCEE-EEEECCCCCHHHHHHHHHHCC---CC-CHHHHHHHHHHCCC-CHHH
T ss_conf ---111104553068655103200215-788268999999999999748---99-99999999997699-9999
No 38
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=99.38 E-value=2.9e-12 Score=105.33 Aligned_cols=163 Identities=23% Similarity=0.393 Sum_probs=120.8
Q ss_pred CHHCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHH----------CCCEEEEEC
Q ss_conf 1000140999999999985725762566308988898249999589983999999999991----------995699611
Q 000823 934 FDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEA----------GANFINISM 1003 (1267)
Q Consensus 934 ~ddI~Gle~vk~~L~e~I~~pl~~~e~f~k~~~~kP~~gILL~GPpGTGKT~LAkAIA~el----------g~~vi~Id~ 1003 (1267)
++-++|-++..+++.+.+.. +...++||.||||+|||+++..+|... +..++.+++
T Consensus 21 ld~~~gr~~ei~~~~~~L~r--------------~~k~n~llvG~~GvGKtaiv~~la~~i~~~~vp~~l~~~~i~~ld~ 86 (387)
T d1qvra2 21 LDPVIGRDEEIRRVIQILLR--------------RTKNNPVLIGEPGVGKTAIVEGLAQRIVKGDVPEGLKGKRIVSLQM 86 (387)
T ss_dssp SCCCCSCHHHHHHHHHHHHC--------------SSCCCCEEEECTTSCHHHHHHHHHHHHHHTCSCTTSTTCEEEEECC
T ss_pred CCCCCCCHHHHHHHHHHHHC--------------CCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCHHHCCCEEEEEEH
T ss_conf 99874808999999999824--------------8899976879999889999999999998089997886966899557
Q ss_pred CCCCH--HCCCCCHHHHHHHHHHHHHCC-CEEEEECCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEE
Q ss_conf 10001--002751899999999987129-917999352122138999843799999988655421688656777689999
Q 000823 1004 SSITS--KWFGEGEKYVKAVFSLASKIA-PSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDTERILVLA 1080 (1267)
Q Consensus 1004 seL~s--~~~Ge~ek~I~~iF~~A~k~~-PsIIiIDEID~L~~~r~~~~~~~a~~~il~~LL~~ldgl~~~~~~~VlVIa 1080 (1267)
..++. +|.|+.+..+..++..+.... +.||||||++.+++.....+...+ ..++...| ....+.+|+
T Consensus 87 ~~l~ag~~~~g~~e~r~~~i~~~~~~~~~~~ilfide~h~l~~~g~~~g~~d~-a~~Lkp~L---------~rg~~~~I~ 156 (387)
T d1qvra2 87 GSLLAGAKYRGEFEERLKAVIQEVVQSQGEVILFIDELHTVVGAGKAEGAVDA-GNMLKPAL---------ARGELRLIG 156 (387)
T ss_dssp -----------CHHHHHHHHHHHHHTTCSSEEEEECCC--------------------HHHH---------HTTCCCEEE
T ss_pred HHHHCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHCCCCCCCCCCH-HHHHHHHH---------HCCCCCEEE
T ss_conf 66652667413689999999998505899669872408888427778774138-99999997---------378851666
Q ss_pred ECCCC----CCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHC
Q ss_conf 43999----999599982035443699999889999999998307
Q 000823 1081 ATNRP----FDLDEAVIRRLPRRLMVNLPDAPNRAKILQVILAKE 1121 (1267)
Q Consensus 1081 TTN~p----~~Ld~aLlrRFd~~I~v~~Pd~eeR~eILk~ll~k~ 1121 (1267)
+|... ..-|++|.||| ..|.|..|+.++-..|++.+....
T Consensus 157 ~tT~~ey~~~e~d~al~rrF-~~v~v~ep~~~~~~~il~~~~~~~ 200 (387)
T d1qvra2 157 ATTLDEYREIEKDPALERRF-QPVYVDEPTVEETISILRGLKEKY 200 (387)
T ss_dssp EECHHHHHHHTTCTTTCSCC-CCEEECCCCHHHHHHHHHHHHHHH
T ss_pred ECCHHHHHHHCCCHHHHHHC-CCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 36899998763367999824-611279986788999999999998
No 39
>d1g6ga_ b.26.1.2 (A:) Phosphotyrosine binding domain of Rad53 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.35 E-value=3.3e-12 Score=104.97 Aligned_cols=91 Identities=24% Similarity=0.449 Sum_probs=74.6
Q ss_pred CCHHHCCCCCCCCCEEEE-------------CCEEEECCCCCCCEEECC-CCCCCCEEEEEEEECCCCEEEEEEEECCCC
Q ss_conf 301102457899622210-------------781687378885200017-887642489999831892189999926873
Q 000823 126 PWCRLLSQSGQNSNVPIC-------------ASIFTVGSSRQCNFPLKD-QAISAVLCKIKHVQSEGSAVAMVESIGSKG 191 (1267)
Q Consensus 126 pWgrL~s~~~~~~~i~i~-------------~~~~tvGr~~~Cd~~l~~-~~~s~~~c~i~~~~~~~~~~~~Led~s~nG 191 (1267)
.-|||+....++|..++. ...|+|||++.||+.+.+ +.||..||+|.... ++ .++++|.|+||
T Consensus 4 ~~~~l~~t~g~~p~~~L~~~~~~~~~~~~~~~~~~~iGR~~~~d~~l~d~~~VSr~Ha~i~~~~-~~--~~~~d~~S~NG 80 (127)
T d1g6ga_ 4 IVCRVICTTGQIPIRDLSADISQVLKEKRSIKKVWTFGRNPACDYHLGNISRLSNKHFQILLGE-DG--NLLLNDISTNG 80 (127)
T ss_dssp EEEEEEESSSSSCCEEEEECHHHHHHCCSSCCEEEEEESSTTSSEECCSCTTSCSSCEEEEECT-TS--CEEEEECCSSC
T ss_pred EEEEEEECCCCCCCEEEEECCCCEEEEEECCCCCEEECCCCCCCCCCCCCCHHHHHHHHEEECC-CE--EEEEECCCCCE
T ss_conf 4899986179887188996277405778628833897368446716899514509998703016-47--99999999660
Q ss_pred EEECCEEECCCCEEECCCCCEEEEEECC
Q ss_conf 6986846068881573489899991248
Q 000823 192 LQVNGKNLKKNTSCELRSGDEVVFGSLG 219 (1267)
Q Consensus 192 t~VNg~~igk~~~~~L~~gDeI~f~~~~ 219 (1267)
|||||+++.++..++|++||+|.|+.+.
T Consensus 81 T~vNg~~l~~~~~~~L~~GD~I~iG~~~ 108 (127)
T d1g6ga_ 81 TWLNGQKVEKNSNQLLSQGDEITVGVGV 108 (127)
T ss_dssp CEETTEECCTTCCEECCTTCEEEECTTS
T ss_pred EEECCEEECCCCEEECCCCCEEEECCCC
T ss_conf 4799889459987893899999979888
No 40
>d2brfa1 b.26.1.2 (A:8-108) Polynucleotide kinase 3'-phosphatase {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.26 E-value=2.5e-11 Score=98.43 Aligned_cols=94 Identities=16% Similarity=0.205 Sum_probs=72.3
Q ss_pred HHHCCCC--CCCCCEEEE--CCEEEECCCCCCCEEECCCCCCCCEEEEEEEECCCCEEEEEEEECCCCEEECCEEECCCC
Q ss_conf 1102457--899622210--781687378885200017887642489999831892189999926873698684606888
Q 000823 128 CRLLSQS--GQNSNVPIC--ASIFTVGSSRQCNFPLKDQAISAVLCKIKHVQSEGSAVAMVESIGSKGLQVNGKNLKKNT 203 (1267)
Q Consensus 128 grL~s~~--~~~~~i~i~--~~~~tvGr~~~Cd~~l~~~~~s~~~c~i~~~~~~~~~~~~Led~s~nGt~VNg~~igk~~ 203 (1267)
|||+=+. ...|.+.+. ...++|||+..|+ +.++.+|..||+|.....++ +++++|+|+|||||||+++.+++
T Consensus 1 grl~l~~p~g~~p~i~l~~~~~~~~iGR~~~~~--i~d~~vSr~Ha~i~~~~~~~--~~~v~~~s~Ngt~vNg~~l~~~~ 76 (101)
T d2brfa1 1 GRLWLESPPGEAPPIFLPSDGQALVLGRGPLTQ--VTDRKCSRTQVELVADPETR--TVAVKQLGVNPSTTGTQELKPGL 76 (101)
T ss_dssp CEEEEECSTTSSCCEECCSTTCCEEECSBTTTT--BCCTTSCSSCEEEEEETTTT--EEEEEECSSSCCEEC-CBCCTTC
T ss_pred CEEEEEECCCCCCCEEEECCCCEEECCCCCCCC--CCCCCCCHHHEEEEECCCCE--EEEEECCCCCCEEEEEEEECCCE
T ss_conf 909999369899868984699769716675565--33788194266998536740--69998377755089999922550
Q ss_pred EEECCCCCEEEEEECCCEEEEEE
Q ss_conf 15734898999912487379987
Q 000823 204 SCELRSGDEVVFGSLGNHAYIFQ 226 (1267)
Q Consensus 204 ~~~L~~gDeI~f~~~~~~aYiF~ 226 (1267)
.+.|++||+|.++.- .+.|+.+
T Consensus 77 ~~~L~~GD~i~l~~~-~~~y~v~ 98 (101)
T d2brfa1 77 EGSLGVGDTLYLVNG-LHPLTLR 98 (101)
T ss_dssp EEEEETTCEEEEETT-EEEEEEE
T ss_pred EEECCCCCEEEECCC-EEEEEEE
T ss_conf 659999999999588-0889999
No 41
>d2piea1 b.26.1.2 (A:13-139) Ubiquitin ligase protein RNF8 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.25 E-value=3.3e-11 Score=97.43 Aligned_cols=102 Identities=21% Similarity=0.306 Sum_probs=76.7
Q ss_pred CCCHHHCCCCCCCCCEEEE-CCEEEECCCCCCCEEECCCC----CCCCEEEEEEEECCCCEEEEEEEE-CCCCEEECCEE
Q ss_conf 7301102457899622210-78168737888520001788----764248999983189218999992-68736986846
Q 000823 125 TPWCRLLSQSGQNSNVPIC-ASIFTVGSSRQCNFPLKDQA----ISAVLCKIKHVQSEGSAVAMVESI-GSKGLQVNGKN 198 (1267)
Q Consensus 125 ~pWgrL~s~~~~~~~i~i~-~~~~tvGr~~~Cd~~l~~~~----~s~~~c~i~~~~~~~~~~~~Led~-s~nGt~VNg~~ 198 (1267)
.+|+ |.........+.+. .+.+||||+..||+.|.++. ||..||+|.... +|. ++|+|+ |+|||||||..
T Consensus 4 ~~w~-L~r~g~~~~~~~l~~~~~~tiGR~~~~~~~l~~~~~~~~VSR~Ha~i~~~~-~g~--~~l~D~~S~NGt~lNg~~ 79 (127)
T d2piea1 4 RSWC-LRRVGMSAGWLLLEDGCEVTVGRGFGVTYQLVSKICPLMISRNHCVLKQNP-EGQ--WTIMDNKSLNGVWLNRAR 79 (127)
T ss_dssp EEEE-EEETTCSSCBEEECTTCCEEEESSSSSSEECCCSSCTTSSCSSCEEEEECT-TSC--EEEEECSCSSCEEETTEE
T ss_pred CEEE-EEECCCCCCEEECCCCCEEEECCCCCCCEEECCCCCCCCCCHHHEEEEECC-CCE--EEEEECCCCCCEEECCEE
T ss_conf 5489-999269988488578998875367876589789975661662361899979-985--999987773772799999
Q ss_pred ECCCCEEECCCCCEEEEEEC----CCEEEEEEECHH
Q ss_conf 06888157348989999124----873799873002
Q 000823 199 LKKNTSCELRSGDEVVFGSL----GNHAYIFQQLLN 230 (1267)
Q Consensus 199 igk~~~~~L~~gDeI~f~~~----~~~aYiF~~l~~ 230 (1267)
+.+++.+.|++||.|.|+.+ ....|.|+.+..
T Consensus 80 l~~~~~~~L~~GD~I~iG~p~~~~~~~~f~~~~~~~ 115 (127)
T d2piea1 80 LEPLRVYSIHQGDYIQLGVPLENKENAEYEYEVTEE 115 (127)
T ss_dssp CCTTCCEECCTTCEEEESCCCTTCSSCSEEEEEEEE
T ss_pred CCCCCEEECCCCCEEEECCCCCCCCCEEEEEEECCC
T ss_conf 469930694799999958888777644799995732
No 42
>d2ff4a3 b.26.1.2 (A:284-382) Probable regulatory protein EmbR, C-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=99.23 E-value=5.4e-11 Score=95.84 Aligned_cols=93 Identities=17% Similarity=0.318 Sum_probs=75.3
Q ss_pred CCCHHHCCCCCCCCCEEEECCEEEECCCCCCCEEECCCCCCCCEEEEEEEECCCCEEEEEEEE-CCCCEEECCEEECCCC
Q ss_conf 730110245789962221078168737888520001788764248999983189218999992-6873698684606888
Q 000823 125 TPWCRLLSQSGQNSNVPICASIFTVGSSRQCNFPLKDQAISAVLCKIKHVQSEGSAVAMVESI-GSKGLQVNGKNLKKNT 203 (1267)
Q Consensus 125 ~pWgrL~s~~~~~~~i~i~~~~~tvGr~~~Cd~~l~~~~~s~~~c~i~~~~~~~~~~~~Led~-s~nGt~VNg~~igk~~ 203 (1267)
.+++.|....+ -....|....++|||+..||++|.++.||..||+|... ++. .+|+|+ |.|||||||+++.+
T Consensus 4 ~~~~~l~~~~~-G~~~~l~~~~~~IGR~~~~di~l~d~~VSr~Ha~i~~~--~~~--~~i~Dl~S~nGt~vNg~~i~~-- 76 (99)
T d2ff4a3 4 QAVAYLHDIAS-GRGYPLQAAATRIGRLHDNDIVLDSANVSRHHAVIVDT--GTN--YVINDLRSSNGVHVQHERIRS-- 76 (99)
T ss_dssp BCCCEEEETTT-CCEEECCSSEEEEESSTTSSEECCCTTSCTTCEEEEEC--SSC--EEEEECSCSSCCEETTEECSS--
T ss_pred CCEEEEECCCC-CCEEEECCCCEEEEECCCCCEEECCCCCCCEEEEEEEE--CCE--EEEEECCCCCCCEECCEECCC--
T ss_conf 54799870799-87999899888981476899998896626036999975--998--999999985887699999488--
Q ss_pred EEECCCCCEEEEEECCCEEEEEEE
Q ss_conf 157348989999124873799873
Q 000823 204 SCELRSGDEVVFGSLGNHAYIFQQ 227 (1267)
Q Consensus 204 ~~~L~~gDeI~f~~~~~~aYiF~~ 227 (1267)
.+.|++||+|.|+ ...|.|+.
T Consensus 77 ~~~L~~Gd~i~iG---~~~~~f~~ 97 (99)
T d2ff4a3 77 AVTLNDGDHIRIC---DHEFTFQI 97 (99)
T ss_dssp EEEECTTCEEEET---TEEEEEEC
T ss_pred CEECCCCCEEEEC---CEEEEEEE
T ss_conf 5699999999999---99999999
No 43
>d1d2na_ c.37.1.20 (A:) Hexamerization domain of N-ethylmalemide-sensitive fusion (NSF) protein {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=99.18 E-value=1.1e-10 Score=93.67 Aligned_cols=59 Identities=19% Similarity=0.317 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHHHCCCCCEEEEECCHHHHHCC-------CCCHHHHHHHHHHCCC---CCEEEEEECCCCCC
Q ss_conf 99999999986301479849997250434138-------9422567899872199---94899941035788
Q 000823 675 LLINTLFEVVFSESRSCPFILFMKDAEKSIAG-------NSDSYSTFKSRLEKLP---DKVIVIGSHTHTDN 736 (1267)
Q Consensus 675 ~~i~~L~ev~~~~~~~~p~Ilfi~di~~~l~g-------~~~~~~~lk~~L~~l~---g~vvvIGs~~~~d~ 736 (1267)
..++.+|+.+.. .+|+||||||||.++.. .....+.+...|+... .+|+|||+||+++.
T Consensus 87 ~~i~~if~~A~~---~~p~il~iDEid~l~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~~v~vi~tTn~~~~ 155 (246)
T d1d2na_ 87 QAMKKIFDDAYK---SQLSCVVVDDIERLLDYVPIGPRFSNLVLQALLVLLKKAPPQGRKLLIIGTTSRKDV 155 (246)
T ss_dssp HHHHHHHHHHHT---SSEEEEEECCHHHHTTCBTTTTBCCHHHHHHHHHHTTCCCSTTCEEEEEEEESCHHH
T ss_pred HHHHHHHHHHHH---CCCCEEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHH
T ss_conf 444445655553---242223310256676513454412478999999986077765450145532488322
No 44
>d2affa1 b.26.1.2 (A:3-100) Antigen ki-67 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.13 E-value=2.4e-10 Score=90.98 Aligned_cols=83 Identities=20% Similarity=0.438 Sum_probs=71.1
Q ss_pred CCCCEEEECCEEEECCCCCCCEEECCCCCCCCEEEEEEEECCCCEEEEEEEECC-CCEEECCEEECCCCEEECCCCCEEE
Q ss_conf 996222107816873788852000178876424899998318921899999268-7369868460688815734898999
Q 000823 136 QNSNVPICASIFTVGSSRQCNFPLKDQAISAVLCKIKHVQSEGSAVAMVESIGS-KGLQVNGKNLKKNTSCELRSGDEVV 214 (1267)
Q Consensus 136 ~~~~i~i~~~~~tvGr~~~Cd~~l~~~~~s~~~c~i~~~~~~~~~~~~Led~s~-nGt~VNg~~igk~~~~~L~~gDeI~ 214 (1267)
+.+...|....++|||+..||++|.++.||..||+|.... +. ++|+|+++ |||||||+.+.+ .+.|.+||+|.
T Consensus 14 ~g~~~~L~~~~~~IGr~~~~di~l~~~~is~~Ha~i~~~~--~~--~~i~d~~s~ng~~vNg~~l~~--~~~L~~Gd~I~ 87 (98)
T d2affa1 14 DGPHFPLSLSTCLFGRGIECDIRIQLPVVSKQHCKIEIHE--QE--AILHNFSSTNPTQVNGSVIDE--PVRLKHGDVIT 87 (98)
T ss_dssp EEEEEECCSSEEEEESSTTSSEEECCTTSCSSBEEEEECS--SC--EEEEECCSSSCCEETTEECSS--CEEECTTCEEE
T ss_pred CCEEEEECCCCEEEEECCCCCEEECCCCCCCEEEEEEEEC--CE--EEEEECCCCCCCEECCEECCC--CEECCCCCEEE
T ss_conf 8619997998889801878989958988271039999958--98--999989976441699999888--46989998999
Q ss_pred EEECCCEEEEEEE
Q ss_conf 9124873799873
Q 000823 215 FGSLGNHAYIFQQ 227 (1267)
Q Consensus 215 f~~~~~~aYiF~~ 227 (1267)
|+ ...|.|++
T Consensus 88 iG---~~~~~fe~ 97 (98)
T d2affa1 88 II---DRSFRYEN 97 (98)
T ss_dssp ET---TEEEEEEE
T ss_pred EC---CEEEEEEE
T ss_conf 99---99999973
No 45
>d1uhta_ b.26.1.2 (A:) FHA domain containing protein At4G14490 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=99.11 E-value=1.3e-10 Score=92.98 Aligned_cols=82 Identities=26% Similarity=0.395 Sum_probs=66.6
Q ss_pred EEEE-CCEEEECCC-CCCCEEECCCCCCCCEEEEEEEECCCCEEEEEEEE-CCCCEEECCEEECCCCEEECCCCCEEEEE
Q ss_conf 2210-781687378-88520001788764248999983189218999992-68736986846068881573489899991
Q 000823 140 VPIC-ASIFTVGSS-RQCNFPLKDQAISAVLCKIKHVQSEGSAVAMVESI-GSKGLQVNGKNLKKNTSCELRSGDEVVFG 216 (1267)
Q Consensus 140 i~i~-~~~~tvGr~-~~Cd~~l~~~~~s~~~c~i~~~~~~~~~~~~Led~-s~nGt~VNg~~igk~~~~~L~~gDeI~f~ 216 (1267)
+.+. ...|+|||+ ..||++|.+..||..||+|... ++. .+|+|+ |.|||||||+++..+..+.|++||+|.|+
T Consensus 27 ~~l~~~~~~~iGR~~~~~di~l~d~~VSr~Ha~i~~~--~~~--~~i~Dl~S~nGT~vng~~l~~~~~~~L~~Gd~i~lG 102 (118)
T d1uhta_ 27 LDYKPGSTIRVGRIVRGNEIAIKDAGISTKHLRIESD--SGN--WVIQDLGSSNGTLLNSNALDPETSVNLGDGDVIKLG 102 (118)
T ss_dssp CCBCTTCCEEEESSSTTCSEECCSSSSCTTCEEEEEC--SSS--EEEECCCCSSCCEESSSBCCTTCEEECCTTEEEEET
T ss_pred EEECCCCEEEECCCCCCCEEEECCCCCCHHEEEEEEE--CCE--EEEEECCCCCEEEECCEECCCCCEEECCCCCEEEEC
T ss_conf 9968999799799776881996962765130399997--998--999988985434799999489967899999999999
Q ss_pred ECCCEEEEEEEC
Q ss_conf 248737998730
Q 000823 217 SLGNHAYIFQQL 228 (1267)
Q Consensus 217 ~~~~~aYiF~~l 228 (1267)
.. .++|-.+
T Consensus 103 ~~---~~~~v~~ 111 (118)
T d1uhta_ 103 EY---TSILVNF 111 (118)
T ss_dssp TT---EEEEEEE
T ss_pred CE---EEEEEEE
T ss_conf 99---9999984
No 46
>d1ofha_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=99.09 E-value=6.3e-10 Score=87.92 Aligned_cols=83 Identities=13% Similarity=0.189 Sum_probs=60.7
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCEEEEE
Q ss_conf 74323322334434304589999988763036875112123334689913640689705889999999985719909998
Q 000823 420 GTNLQESFENFPYYLSENTKNVLIAASYIHLKHKDHAKYTSELTTVNPRILLSGPAGSEIYQEMLAKALAHYFGAKLLIF 499 (1267)
Q Consensus 420 ~~~~~vsf~~FPYylse~tk~~L~~~~~~hL~~~~~~~~~~~L~~~s~rILLsgp~GsE~Yqe~LaKALA~~f~a~LL~l 499 (1267)
|++|.-.++..= |=-++.|.+|..+++-|++...+..-.+. ....+.|||.|||| +++++||||||+.++.++..+
T Consensus 5 p~~i~~~L~~~V-iGQd~A~~~l~~av~~~~~r~~~~~~~~~-~~~~~~iLl~GPpG--~GKT~lAkalA~~~~~~~~~i 80 (309)
T d1ofha_ 5 PREIVSELDQHI-IGQADAKRAVAIALRNRWRRMQLQEPLRH-EVTPKNILMIGPTG--VGKTEIARRLAKLANAPFIKV 80 (309)
T ss_dssp HHHHHHHHHTTC-CSCHHHHHHHHHHHHHHHHTTSSCHHHHH-HCCCCCEEEECCTT--SSHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHCCCC-CCHHHHHHHHHHHHHHHHHHHCCCCCCCC-CCCCCEEEEECCCC--CCHHHHHHHHHHCCCCCHHCC
T ss_conf 899999965813-49199999999999989877245787766-78986699989999--888899999862132210003
Q ss_pred ECCCCCC
Q ss_conf 3456579
Q 000823 500 DSHSLLG 506 (1267)
Q Consensus 500 D~~~~~g 506 (1267)
|.+.|..
T Consensus 81 ~~s~~~~ 87 (309)
T d1ofha_ 81 EATKFTE 87 (309)
T ss_dssp EGGGGSS
T ss_pred CCCCCCC
T ss_conf 4433010
No 47
>d1w44a_ c.37.1.11 (A:) NTPase P4 {Bacteriophage phi-12 [TaxId: 161736]}
Probab=99.07 E-value=2.3e-13 Score=113.58 Aligned_cols=136 Identities=13% Similarity=0.081 Sum_probs=95.2
Q ss_pred EECCCCCCCCCCC-----CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHC-
Q ss_conf 1002489999787-----8987778866210135434468884014799999999998630147984999725043413-
Q 000823 632 GVRFDKPIPDGVD-----LGGQCEGGHGFFCNVTDLRLENSGTEDLDKLLINTLFEVVFSESRSCPFILFMKDAEKSIA- 705 (1267)
Q Consensus 632 gV~Fd~~~~~~~~-----l~~~c~~~~~ff~~~~~~~~~~~~~e~~~k~~i~~L~ev~~~~~~~~p~Ilfi~di~~~l~- 705 (1267)
-++|.+|||+||| ||..+.....|+--.+...+++|+|+ .+..+..||+.+.. |.||||||||.+.+
T Consensus 125 ~~l~~G~pG~GKT~la~ala~~~~~~~~~~~~~~~~~~~~~~G~--~e~~~~~~f~~a~~-----~~ilf~DEid~~~~~ 197 (321)
T d1w44a_ 125 MVIVTGKGNSGKTPLVHALGEALGGKDKYATVRFGEPLSGYNTD--FNVFVDDIARAMLQ-----HRVIVIDSLKNVIGA 197 (321)
T ss_dssp EEEEECSSSSCHHHHHHHHHHHHHTTSCCEEEEBSCSSTTCBCC--HHHHHHHHHHHHHH-----CSEEEEECCTTTC--
T ss_pred EEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEHHHHHHCCCCH--HHHHHHHHHHHHHH-----CCEEEEEHHHHHCCC
T ss_conf 38887799850889999999986379980897826854424445--78999999999862-----658974101222123
Q ss_pred --------CCCCHHHHHHHHHH--CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCC
Q ss_conf --------89422567899872--19994899941035788334589998620134773111101357884344333578
Q 000823 706 --------GNSDSYSTFKSRLE--KLPDKVIVIGSHTHTDNRKEKSHPGGLLFTKFGSNQTALLDLAFPDSFGRLHDRGK 775 (1267)
Q Consensus 706 --------g~~~~~~~lk~~L~--~l~g~vvvIGs~~~~d~~~~~~~~~~~~l~~~g~~~~~l~d~a~~~~~~r~~~~~~ 775 (1267)
...+..+-+...++ ..+.+|+|||+||+.+ .+++ --..+.||||
T Consensus 198 r~~~~~~~~~~r~v~~lL~e~dg~~~~~~v~viaatN~~~-~~~~---i~~~~~r~~R---------------------- 251 (321)
T d1w44a_ 198 AGGNTTSGGISRGAFDLLSDIGAMAASRGCVVIASLNPTS-NDDK---IVELVKEASR---------------------- 251 (321)
T ss_dssp ---------CCHHHHHHHHHHHHHHHHHTCEEEEECCCCC-CCHH---HHHHHHHHHH----------------------
T ss_pred CCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCC-CCCC---HHHHHHCCCC----------------------
T ss_conf 4567898741334515665203556678849998379763-5310---1023336575----------------------
Q ss_pred CCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHH
Q ss_conf 7036788984208973997079878899999985465
Q 000823 776 EIPKATKLLTKLFPNKVTIHMPQDEALLASWKHQLDR 812 (1267)
Q Consensus 776 ~~~~~d~~l~rlFp~~IeI~LPdeE~RL~Ilk~qLek 812 (1267)
|..+++|..|+.++|.+|++.+++.
T Consensus 252 ------------f~~~v~v~~pd~~~r~~il~~~~~~ 276 (321)
T d1w44a_ 252 ------------SNSTSLVISTDVDGEWQVLTRTGEG 276 (321)
T ss_dssp ------------HSCSEEEEECSSTTEEEEEEECBTT
T ss_pred ------------CCCEEECCCCCHHHHHHHHHHHCCC
T ss_conf ------------5542115898867899999986258
No 48
>d1mzka_ b.26.1.2 (A:) Kinase associated protein phosphatase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=99.06 E-value=4e-10 Score=89.35 Aligned_cols=77 Identities=19% Similarity=0.297 Sum_probs=64.3
Q ss_pred CEEEECCCCCCCEEECCCCCCCCEEEEEEEECCCCEEEEEEEE-CCCCEEECCEEECC--------CCEEECCCCCEEEE
Q ss_conf 8168737888520001788764248999983189218999992-68736986846068--------88157348989999
Q 000823 145 SIFTVGSSRQCNFPLKDQAISAVLCKIKHVQSEGSAVAMVESI-GSKGLQVNGKNLKK--------NTSCELRSGDEVVF 215 (1267)
Q Consensus 145 ~~~tvGr~~~Cd~~l~~~~~s~~~c~i~~~~~~~~~~~~Led~-s~nGt~VNg~~igk--------~~~~~L~~gDeI~f 215 (1267)
..++|||+..||++|.++.+|..||+|......+ ..|++|+ |+|||||||.++.+ +..+.|++||+|.|
T Consensus 30 ~~~~IGR~~~~di~l~d~~vSr~Ha~i~~~~~~~--~~~v~DlgS~nGT~vNg~~i~~~~~~~~~~g~~~~L~~gd~i~i 107 (122)
T d1mzka_ 30 LPVKLGRVSPSDLALKDSEVSGKHAQITWNSTKF--KWELVDMGSLNGTLVNSHSISHPDLGSRKWGNPVELASDDIITL 107 (122)
T ss_dssp CSEEEESSSSCSEECCCTTSSSEEEEEEEETTTT--EEEEEETTCSSCCEETTEESSCCCTTTCCCCCCEECCTTEEEEC
T ss_pred CCEEECCCCCCCEEECCCCCCCCCEEEEEECCCC--EEEEEECCCCCCEEECCEECCCCCCCCCCCCCEEECCCCCEEEE
T ss_conf 8799558989889988988673325999968989--79995289877459999997454345456896588689999998
Q ss_pred EECCCEEEE
Q ss_conf 124873799
Q 000823 216 GSLGNHAYI 224 (1267)
Q Consensus 216 ~~~~~~aYi 224 (1267)
+.... +|+
T Consensus 108 G~~~~-~~v 115 (122)
T d1mzka_ 108 GTTTK-VYV 115 (122)
T ss_dssp SSSCE-EEE
T ss_pred CCEEE-EEE
T ss_conf 99289-999
No 49
>d2g1la1 b.26.1.2 (A:498-599) Kinesin-like protein kif1c {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.06 E-value=2e-09 Score=84.23 Aligned_cols=81 Identities=25% Similarity=0.388 Sum_probs=67.0
Q ss_pred EEECCEEEECCCCCCCEEECCCCCCCCEEEEEEEECCCCEEEEEEEECC-CCEEECCEEECCCCEEECCCCCEEEEEECC
Q ss_conf 2107816873788852000178876424899998318921899999268-736986846068881573489899991248
Q 000823 141 PICASIFTVGSSRQCNFPLKDQAISAVLCKIKHVQSEGSAVAMVESIGS-KGLQVNGKNLKKNTSCELRSGDEVVFGSLG 219 (1267)
Q Consensus 141 ~i~~~~~tvGr~~~Cd~~l~~~~~s~~~c~i~~~~~~~~~~~~Led~s~-nGt~VNg~~igk~~~~~L~~gDeI~f~~~~ 219 (1267)
.+....++||| ..||+.|.+..||..||.|..+..++....++.|.++ |||||||++|.. .+.|++||+|.|+.
T Consensus 20 ~l~~~~~~iGr-~~~dI~l~~~~vs~~Ha~i~~~~~~~~~~~~i~d~~s~~gt~VNg~~i~~--~~~L~~gD~I~~G~-- 94 (102)
T d2g1la1 20 HIKDGVTRVGQ-VDMDIKLTGQFIREQHCLFRSIPQPDGEVVVTLEPCEGAETYVNGKLVTE--PLVLKSGNRIVMGK-- 94 (102)
T ss_dssp ECCSEEEEEES-SSCSEECCCTTCCSEEEEEEEEECTTSCEEEEEEECTTCCEEETTEECCS--CEECCTTCEEEETT--
T ss_pred ECCCCCEECCC-CCCCEEECCCCEEEEEEEEEEEECCCCCEEEEECCCCCCCEEECCEECCC--EEECCCCCEEEECC--
T ss_conf 82898577999-97478864431110026999988688947998638988880899869265--16968999999899--
Q ss_pred CEEEEEE
Q ss_conf 7379987
Q 000823 220 NHAYIFQ 226 (1267)
Q Consensus 220 ~~aYiF~ 226 (1267)
.+.|.|.
T Consensus 95 ~~~frf~ 101 (102)
T d2g1la1 95 NHVFRFN 101 (102)
T ss_dssp TEEEEEE
T ss_pred CEEEEEC
T ss_conf 8899983
No 50
>d1ny5a2 c.37.1.20 (A:138-384) Transcriptional activator sigm54 (NtrC1), C-terminal domain {Aquifex aeolicus [TaxId: 63363]}
Probab=98.93 E-value=7.4e-09 Score=79.93 Aligned_cols=140 Identities=22% Similarity=0.368 Sum_probs=80.3
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHH---CCCEEEEECCCCCHHC-----CCCCH-------HHHHHHHHHHHHCCCEEEEE
Q ss_conf 249999589983999999999991---9956996111000100-----27518-------99999999987129917999
Q 000823 971 KGILLFGPPGTGKTMLAKAVATEA---GANFINISMSSITSKW-----FGEGE-------KYVKAVFSLASKIAPSVIFV 1035 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkAIA~el---g~~vi~Id~seL~s~~-----~Ge~e-------k~I~~iF~~A~k~~PsIIiI 1035 (1267)
..|||+|++||||+.+|++|.... ..+++.++|..+.... +|... .....+|+.|.. ++|||
T Consensus 24 ~pvlI~Ge~GtGK~~~A~~ih~~s~~~~~~~~~~~~~~~~~~~~~~~lfg~~~~~~~~~~~~~~g~l~~a~g---GtL~l 100 (247)
T d1ny5a2 24 CPVLITGESGVGKEVVARLIHKLSDRSKEPFVALNVASIPRDIFEAELFGYEKGAFTGAVSSKEGFFELADG---GTLFL 100 (247)
T ss_dssp SCEEEECSTTSSHHHHHHHHHHHSTTTTSCEEEEETTTSCHHHHHHHHHCBCTTSSTTCCSCBCCHHHHTTT---SEEEE
T ss_pred CCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCHHHCCCC---CEEEE
T ss_conf 978998999817999999999965876533202102343101128876285357767753355888772389---97999
Q ss_pred CCCHHHHCCCCCCCHHHHHHHHHHHH-HHHCCCCCCCCCCCEEEEEECCCC-------CCCCHHHHHCCCCCCCCCCCCH
Q ss_conf 35212213899984379999998865-542168865677768999943999-------9995999820354436999998
Q 000823 1036 DEVDSMLGRRENPGEHEAMRKMKNEF-MVNWDGLRTKDTERILVLAATNRP-------FDLDEAVIRRLPRRLMVNLPDA 1107 (1267)
Q Consensus 1036 DEID~L~~~r~~~~~~~a~~~il~~L-L~~ldgl~~~~~~~VlVIaTTN~p-------~~Ld~aLlrRFd~~I~v~~Pd~ 1107 (1267)
||||.| +...+..+.+++..- ...+.+... ...++.+|++|+.+ ..+++.+..|+ ..+.+.+|..
T Consensus 101 ~~i~~L-----~~~~Q~~L~~~l~~~~~~~~~~~~~-~~~~~RlI~~s~~~l~~l~~~~~f~~~L~~~l-~~~~i~lPpL 173 (247)
T d1ny5a2 101 DEIGEL-----SLEAQAKLLRVIESGKFYRLGGRKE-IEVNVRILAATNRNIKELVKEGKFREDLYYRL-GVIEIEIPPL 173 (247)
T ss_dssp ESGGGC-----CHHHHHHHHHHHHHSEECCBTCCSB-EECCCEEEEEESSCHHHHHHTTSSCHHHHHHH-TTEEEECCCG
T ss_pred ECHHHC-----CHHHHHHHHHHHHHCCEEECCCCCC-EECCEEEEEECCCCHHHHHHCCCCCHHHHHHC-CEEEECCCCH
T ss_conf 583759-----9999999999997598787899970-23375999933979999988599748888640-8106558970
Q ss_pred HHH----HHHHHHHHHH
Q ss_conf 899----9999999830
Q 000823 1108 PNR----AKILQVILAK 1120 (1267)
Q Consensus 1108 eeR----~eILk~ll~k 1120 (1267)
.+| ..+++.++..
T Consensus 174 reR~~Di~~l~~~~l~~ 190 (247)
T d1ny5a2 174 RERKEDIIPLANHFLKK 190 (247)
T ss_dssp GGCHHHHHHHHHHHHHH
T ss_pred HHCHHHHHHHHHHHHHH
T ss_conf 11624576640013433
No 51
>d2gnoa2 c.37.1.20 (A:11-208) gamma subunit of DNA polymerase III, N-domain {Thermotoga maritima [TaxId: 2336]}
Probab=98.88 E-value=2.1e-08 Score=76.52 Aligned_cols=117 Identities=15% Similarity=0.221 Sum_probs=85.3
Q ss_pred CCCEEEEECCCCCHHHHHHHHHHHHHC------CCEEEEECCCCCHHCCCCCHHHHHHHHHHHHHCC----CEEEEECCC
Q ss_conf 982499995899839999999999919------9569961110001002751899999999987129----917999352
Q 000823 969 PCKGILLFGPPGTGKTMLAKAVATEAG------ANFINISMSSITSKWFGEGEKYVKAVFSLASKIA----PSVIFVDEV 1038 (1267)
Q Consensus 969 P~~gILL~GPpGTGKT~LAkAIA~elg------~~vi~Id~seL~s~~~Ge~ek~I~~iF~~A~k~~----PsIIiIDEI 1038 (1267)
.+.++||+||+|+|||.+|..+++... ..|+.+.... ..+ .-..++.+...+...+ .-|++|||+
T Consensus 14 ~~~~~l~~G~~g~gk~~~a~~l~~~i~~~~~~h~D~~~i~~~~---~~I--~Id~IR~i~~~~~~~~~~~~~KviIId~a 88 (198)
T d2gnoa2 14 EGISILINGEDLSYPREVSLELPEYVEKFPPKASDVLEIDPEG---ENI--GIDDIRTIKDFLNYSPELYTRKYVIVHDC 88 (198)
T ss_dssp SSEEEEEECSSSSHHHHHHHHHHHHHHTSCCCTTTEEEECCSS---SCB--CHHHHHHHHHHHTSCCSSSSSEEEEETTG
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCC---CCC--CHHHHHHHHHHHHHCCCCCCCEEEEEECC
T ss_conf 9855998898998889999999999843456799889980776---789--98999999999961754589879999473
Q ss_pred HHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCHHHHHCCCCCCCCCCCCH
Q ss_conf 122138999843799999988655421688656777689999439999995999820354436999998
Q 000823 1039 DSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDTERILVLAATNRPFDLDEAVIRRLPRRLMVNLPDA 1107 (1267)
Q Consensus 1039 D~L~~~r~~~~~~~a~~~il~~LL~~ldgl~~~~~~~VlVIaTTN~p~~Ld~aLlrRFd~~I~v~~Pd~ 1107 (1267)
|.| + ....+.|+..++.. +.++++|.+|+.+..+.+.+++|+ ..+.|+.|..
T Consensus 89 d~l-----~-------~~aqNaLLK~LEEP----p~~t~fiLit~~~~~ll~TI~SRC-~~i~~~~p~~ 140 (198)
T d2gnoa2 89 ERM-----T-------QQAANAFLKALEEP----PEYAVIVLNTRRWHYLLPTIKSRV-FRVVVNVPKE 140 (198)
T ss_dssp GGB-----C-------HHHHHHTHHHHHSC----CTTEEEEEEESCGGGSCHHHHTTS-EEEECCCCHH
T ss_pred CCC-----C-------HHHHHHHHHHHHCC----CCCCEEEECCCCHHHCHHHHHCCE-EEEECCCCHH
T ss_conf 103-----6-------66664788877378----988522220699566878873522-7776799368
No 52
>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta, toxin zeta subunit {Streptococcus pyogenes [TaxId: 1314]}
Probab=98.85 E-value=4e-10 Score=89.35 Aligned_cols=68 Identities=31% Similarity=0.413 Sum_probs=52.1
Q ss_pred CCCHHCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCCCHH
Q ss_conf 561000140999999999985725762566308988898249999589983999999999991995699611100010
Q 000823 932 VTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSK 1009 (1267)
Q Consensus 932 vt~ddI~Gle~vk~~L~e~I~~pl~~~e~f~k~~~~kP~~gILL~GPpGTGKT~LAkAIA~elg~~vi~Id~seL~s~ 1009 (1267)
+.|.+..+.+.+.+.+.+..... .. ...+.++||+||||||||++|++||.+++.+|+.+++.++...
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~---------~~-~~~P~~ilL~GpPGtGKT~la~~la~~~~~~~~~i~~d~~~~~ 71 (273)
T d1gvnb_ 4 VNFTDKQFENRLNDNLEELIQGK---------KA-VESPTAFLLGGQPGSGKTSLRSAIFEETQGNVIVIDNDTFKQQ 71 (273)
T ss_dssp TCCCHHHHHHHHHHHHHHHHTTC---------CC-CSSCEEEEEECCTTSCTHHHHHHHHHHTTTCCEEECTHHHHTT
T ss_pred CCCCHHHHHHHHHHHHHHHHHCC---------CC-CCCCEEEEEECCCCCCHHHHHHHHHHHHHCCEEEEECHHHHHH
T ss_conf 65576999999999999998415---------27-8999799988979988999999999986515489832899998
No 53
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus solfataricus [TaxId: 2287]}
Probab=98.82 E-value=8.2e-06 Score=57.21 Aligned_cols=181 Identities=15% Similarity=0.145 Sum_probs=109.3
Q ss_pred CCHHCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCCCHHCCC
Q ss_conf 61000140999999999985725762566308988898249999589983999999999991995699611100010027
Q 000823 933 TFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFG 1012 (1267)
Q Consensus 933 t~ddI~Gle~vk~~L~e~I~~pl~~~e~f~k~~~~kP~~gILL~GPpGTGKT~LAkAIA~elg~~vi~Id~seL~s~~~G 1012 (1267)
.-+++.|-++..++|.+. ..+.++++||+|+|||+|++.++..++..+..+++.........
T Consensus 10 ~~~~f~GR~~el~~l~~~------------------~~~~i~i~G~~G~GKTsLl~~~~~~~~~~~~~i~~~~~~~~~~~ 71 (283)
T d2fnaa2 10 NRKDFFDREKEIEKLKGL------------------RAPITLVLGLRRTGKSSIIKIGINELNLPYIYLDLRKFEERNYI 71 (283)
T ss_dssp SGGGSCCCHHHHHHHHHT------------------CSSEEEEEESTTSSHHHHHHHHHHHHTCCEEEEEGGGGTTCSCC
T ss_pred CHHHCCCHHHHHHHHHHC------------------CCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCC
T ss_conf 722078969999999840------------------59879998699982999999999977998699972145333324
Q ss_pred CCHH----------------------------------------------HHHHHHHHHH--HCCCEEEEECCCHHHHCC
Q ss_conf 5189----------------------------------------------9999999987--129917999352122138
Q 000823 1013 EGEK----------------------------------------------YVKAVFSLAS--KIAPSVIFVDEVDSMLGR 1044 (1267)
Q Consensus 1013 e~ek----------------------------------------------~I~~iF~~A~--k~~PsIIiIDEID~L~~~ 1044 (1267)
.... .+..++.... ...+.+|++||++.+...
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~i~id~~~~~~~~ 151 (283)
T d2fnaa2 72 SYKDFLLELQKEINKLVKRLPSLLKALKNIQGIVIMGNEIKFNWNRKDRLSFANLLESFEQASKDNVIIVLDEAQELVKL 151 (283)
T ss_dssp CHHHHHHHHHHHHHHHHHHCTTHHHHTTTSTTEEECSSSEEEC-----CCCHHHHHHHHHHTCSSCEEEEEETGGGGGGC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCC
T ss_conf 39999999999754455555777777775303343443222341001345899999998763155554566405541333
Q ss_pred CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCC---------CCCHHHHHCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 999843799999988655421688656777689999439999---------99599982035443699999889999999
Q 000823 1045 RENPGEHEAMRKMKNEFMVNWDGLRTKDTERILVLAATNRPF---------DLDEAVIRRLPRRLMVNLPDAPNRAKILQ 1115 (1267)
Q Consensus 1045 r~~~~~~~a~~~il~~LL~~ldgl~~~~~~~VlVIaTTN~p~---------~Ld~aLlrRFd~~I~v~~Pd~eeR~eILk 1115 (1267)
... .....++. +... ..++..+.+..... .....+..|+...+.++..+.++..++++
T Consensus 152 ~~~-~~~~~l~~----~~~~--------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~l~~~e~~~~l~ 218 (283)
T d2fnaa2 152 RGV-NLLPALAY----AYDN--------LKRIKFIMSGSEMGLLYDYLRVEDPESPLFGRAFSTVELKPFSREEAIEFLR 218 (283)
T ss_dssp TTC-CCHHHHHH----HHHH--------CTTEEEEEEESSHHHHHHHTTTTCTTSTTTTCCCEEEEECCCCHHHHHHHHH
T ss_pred CHH-HHHHHHHH----HHHH--------HHHHHHHHCCCCCHHHHHHHHHHHHCCHHCCCCEEEEEECCCCHHHHHHHHH
T ss_conf 269-99999999----9875--------3113442035650678999975421000103410588628878899999999
Q ss_pred HHHHHCCCCCCCCHHHHHHHCCCCCHHHHHH
Q ss_conf 9983079999030999999827998999999
Q 000823 1116 VILAKEDLSPDVDFDAIANMTDGYSGSDLKV 1146 (1267)
Q Consensus 1116 ~ll~k~~l~~didl~~LA~~TeGySg~DLk~ 1146 (1267)
..+...++..+ +++.+.+.+.| .+..|..
T Consensus 219 ~~~~~~~~~~~-~~~~i~~~~~G-~P~~L~~ 247 (283)
T d2fnaa2 219 RGFQEADIDFK-DYEVVYEKIGG-IPGWLTY 247 (283)
T ss_dssp HHHHHHTCCCC-CHHHHHHHHCS-CHHHHHH
T ss_pred HHHHHCCCCHH-HHHHHHHHHCC-CHHHHHH
T ss_conf 66545699999-99999999699-7999999
No 54
>d1wlna1 b.26.1.2 (A:8-114) Afadin {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.81 E-value=1.1e-08 Score=78.68 Aligned_cols=79 Identities=22% Similarity=0.384 Sum_probs=64.3
Q ss_pred EEECCEEEECCC--CCCCEEECCCCCCCCEEEEEEEECCCCEEEEEEEECC-CCEEECCEEECCCCEEECCCCCEEEEEE
Q ss_conf 210781687378--8852000178876424899998318921899999268-7369868460688815734898999912
Q 000823 141 PICASIFTVGSS--RQCNFPLKDQAISAVLCKIKHVQSEGSAVAMVESIGS-KGLQVNGKNLKKNTSCELRSGDEVVFGS 217 (1267)
Q Consensus 141 ~i~~~~~tvGr~--~~Cd~~l~~~~~s~~~c~i~~~~~~~~~~~~Led~s~-nGt~VNg~~igk~~~~~L~~gDeI~f~~ 217 (1267)
.|.....+|||+ ..|||.|.+..||..||.|..... .++|+|+++ |||||||++|.+ .+.|++||+|.|+.
T Consensus 25 ~l~~~~~~iG~~rs~~~dI~L~~~~Vs~~Ha~i~~~~~----~~~l~d~~s~~gt~vng~~v~~--~~~L~~gd~i~iG~ 98 (107)
T d1wlna1 25 RLQLSVTEVGTEKFDDNSIQLFGPGIQPHHCDLTNMDG----VVTVTPRSMDAETYVDGQRISE--TTMLQSGMRLQFGT 98 (107)
T ss_dssp ECCSEEEECSSSCCSTTCCCCCCTTCCSSCEEEEESSS----CEEEEESCSSSCEEETSCBCSS--CEEECTTCEEEETT
T ss_pred EECCCCEEECCCCCCCCCEEECCCCEEEEEEEEEECCC----CCEEECCCCCCCEEECCCCCCC--EEECCCCCEEEECC
T ss_conf 97999879999878998499899653321999997246----3199527888632995202364--06999999999899
Q ss_pred CCCEEEEEEE
Q ss_conf 4873799873
Q 000823 218 LGNHAYIFQQ 227 (1267)
Q Consensus 218 ~~~~aYiF~~ 227 (1267)
. +.|.|.+
T Consensus 99 ~--~~Frf~~ 106 (107)
T d1wlna1 99 S--HVFKFVD 106 (107)
T ss_dssp T--EEEEEEC
T ss_pred C--EEEEEEC
T ss_conf 6--2999959
No 55
>d1jbka_ c.37.1.20 (A:) ClpB, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=98.81 E-value=6.5e-10 Score=87.82 Aligned_cols=90 Identities=21% Similarity=0.335 Sum_probs=69.7
Q ss_pred HHHHHHHHHHHHHHCCCCCEEEEECCHHHHHC-----CCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCC
Q ss_conf 99999999998630147984999725043413-----8942256789987219994899941035788334589998620
Q 000823 674 KLLINTLFEVVFSESRSCPFILFMKDAEKSIA-----GNSDSYSTFKSRLEKLPDKVIVIGSHTHTDNRKEKSHPGGLLF 748 (1267)
Q Consensus 674 k~~i~~L~ev~~~~~~~~p~Ilfi~di~~~l~-----g~~~~~~~lk~~L~~l~g~vvvIGs~~~~d~~~~~~~~~~~~l 748 (1267)
+++...|.++... .+++||||||+|.+++ |+.++.+.|++.|.+ |.+.|||++|-.++++
T Consensus 101 ~rl~~il~e~~~~---~~~iILfIDeih~l~~~g~~~g~~d~~~~Lkp~L~r--g~l~~IgatT~eey~~---------- 165 (195)
T d1jbka_ 101 ERLKGVLNDLAKQ---EGNVILFIDELHTMVGAGKADGAMDAGNMLKPALAR--GELHCVGATTLDEYRQ---------- 165 (195)
T ss_dssp HHHHHHHHHHHHS---TTTEEEEEETGGGGTT------CCCCHHHHHHHHHT--TSCCEEEEECHHHHHH----------
T ss_pred HHHHHHHHHHHCC---CCCEEEECCHHHHHHCCCCCCCCCCHHHHHHHHHHC--CCCEEEECCCHHHHHH----------
T ss_conf 9999999987317---980899726089984378777752389999999857--9954985189999999----------
Q ss_pred CCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHH
Q ss_conf 13477311110135788434433357870367889842089739970798788999999
Q 000823 749 TKFGSNQTALLDLAFPDSFGRLHDRGKEIPKATKLLTKLFPNKVTIHMPQDEALLASWK 807 (1267)
Q Consensus 749 ~~~g~~~~~l~d~a~~~~~~r~~~~~~~~~~~d~~l~rlFp~~IeI~LPdeE~RL~Ilk 807 (1267)
.+.+ |.+|.+|| ++|.|.+|+.+..+.|++
T Consensus 166 -----------------~~e~-----------d~aL~rrF-~~I~V~Ep~~e~t~~IL~ 195 (195)
T d1jbka_ 166 -----------------YIEK-----------DAALERRF-QKVFVAEPSVEDTIAILR 195 (195)
T ss_dssp -----------------HTTT-----------CHHHHTTE-EEEECCCCCHHHHHTTCC
T ss_pred -----------------HHHC-----------CHHHHHCC-CEEECCCCCHHHHHHHHC
T ss_conf -----------------9873-----------88999639-875458989899999859
No 56
>d1in4a2 c.37.1.20 (A:17-254) Holliday junction helicase RuvB {Thermotoga maritima [TaxId: 2336]}
Probab=98.23 E-value=0.00018 Score=47.23 Aligned_cols=65 Identities=25% Similarity=0.302 Sum_probs=48.2
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCEEEEEECCCC
Q ss_conf 2233443430458999998876303687511212333468991364068970588999999998571990999834565
Q 000823 426 SFENFPYYLSENTKNVLIAASYIHLKHKDHAKYTSELTTVNPRILLSGPAGSEIYQEMLAKALAHYFGAKLLIFDSHSL 504 (1267)
Q Consensus 426 sf~~FPYylse~tk~~L~~~~~~hL~~~~~~~~~~~L~~~s~rILLsgp~GsE~Yqe~LaKALA~~f~a~LL~lD~~~~ 504 (1267)
+||++ .-.|+.+..|....-.+.+..+. .+-+||+|||| +++++|||+||++++.....+..+.+
T Consensus 7 ~~~di--vGqe~~~~~l~~~i~~~~~~~~~----------~~~~L~~GPpG--tGKT~lA~~la~~~~~~~~~~~~~~~ 71 (238)
T d1in4a2 7 SLDEF--IGQENVKKKLSLALEAAKMRGEV----------LDHVLLAGPPG--LGKTTLAHIIASELQTNIHVTSGPVL 71 (238)
T ss_dssp SGGGC--CSCHHHHHHHHHHHHHHHHHTCC----------CCCEEEESSTT--SSHHHHHHHHHHHHTCCEEEEETTTC
T ss_pred CHHHC--CCHHHHHHHHHHHHHHHHHCCCC----------CCEEEEECCCC--CCHHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf 29990--89599999999999978853887----------77489879999--73889999998503888533257442
No 57
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein Aq_1292 {Aquifex aeolicus [TaxId: 63363]}
Probab=97.87 E-value=0.00013 Score=48.29 Aligned_cols=118 Identities=19% Similarity=0.238 Sum_probs=62.3
Q ss_pred EEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCC-----------------------C----------CHHCCCCC----
Q ss_conf 4999958998399999999999199569961110-----------------------0----------01002751----
Q 000823 972 GILLFGPPGTGKTMLAKAVATEAGANFINISMSS-----------------------I----------TSKWFGEG---- 1014 (1267)
Q Consensus 972 gILL~GPpGTGKT~LAkAIA~elg~~vi~Id~se-----------------------L----------~s~~~Ge~---- 1014 (1267)
.|+|.||+|+|||+|++.++..+......+.... + ..++ +..
T Consensus 2 ki~I~G~~G~GKSTLl~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 80 (178)
T d1ye8a1 2 KIIITGEPGVGKTTLVKKIVERLGKRAIGFWTEEVRDPETKKRTGFRIITTEGKKKIFSSKFFTSKKLVGSY-GVNVQYF 80 (178)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHGGGEEEEEEEEEC------CCEEEEEETTCCEEEEEETTCCCSSEETTE-EECHHHH
T ss_pred EEEEECCCCCHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCCCCHH
T ss_conf 899998999389999999981488886469987713288887653112336677788754113455443023-0376256
Q ss_pred ----HHHHHHHHHHHHHCCCEEEEECCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCH
Q ss_conf ----8999999999871299179993521221389998437999999886554216886567776899994399999959
Q 000823 1015 ----EKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDTERILVLAATNRPFDLDE 1090 (1267)
Q Consensus 1015 ----ek~I~~iF~~A~k~~PsIIiIDEID~L~~~r~~~~~~~a~~~il~~LL~~ldgl~~~~~~~VlVIaTTN~p~~Ld~ 1090 (1267)
....+..+..+....|.+|++||+..... .. ......+...+.. .+..+|+++.... +.+
T Consensus 81 ~~~~~~~~~~~l~~~~~~~~~vlllDE~~~~~~-----~~----~~~~~~l~~~l~~------~~~~il~~~h~~~-~~~ 144 (178)
T d1ye8a1 81 EELAIPILERAYREAKKDRRKVIIIDEIGKMEL-----FS----KKFRDLVRQIMHD------PNVNVVATIPIRD-VHP 144 (178)
T ss_dssp HHHHHHHHHHHHHHHHHCTTCEEEECCCSTTGG-----GC----HHHHHHHHHHHTC------TTSEEEEECCSSC-CSH
T ss_pred HHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCH-----HH----HHHHHHHHHHHCC------CCCEEEEEECCHH-HHH
T ss_conf 653201378999999740997423027773100-----45----7999999987505------7978999974477-898
Q ss_pred ---HHHHCC-CCCCCCCCCC
Q ss_conf ---998203-5443699999
Q 000823 1091 ---AVIRRL-PRRLMVNLPD 1106 (1267)
Q Consensus 1091 ---aLlrRF-d~~I~v~~Pd 1106 (1267)
.+.++. ...+.+...+
T Consensus 145 ~~~~i~~~~~~~i~~v~~~n 164 (178)
T d1ye8a1 145 LVKEIRRLPGAVLIELTPEN 164 (178)
T ss_dssp HHHHHHTCTTCEEEECCTTT
T ss_pred HHCEEEEEECCEEEEECCCC
T ss_conf 63659987199999989964
No 58
>d1sxja2 c.37.1.20 (A:295-547) Replication factor C1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=97.79 E-value=0.0014 Score=40.61 Aligned_cols=77 Identities=17% Similarity=0.099 Sum_probs=48.9
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCCCCC-CCCC-CCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCEEEEEECCC
Q ss_conf 22334434304589999988763036875-1121-233346899136406897058899999999857199099983456
Q 000823 426 SFENFPYYLSENTKNVLIAASYIHLKHKD-HAKY-TSELTTVNPRILLSGPAGSEIYQEMLAKALAHYFGAKLLIFDSHS 503 (1267)
Q Consensus 426 sf~~FPYylse~tk~~L~~~~~~hL~~~~-~~~~-~~~L~~~s~rILLsgp~GsE~Yqe~LaKALA~~f~a~LL~lD~~~ 503 (1267)
+|+++-.. ++.+..|.+..-....... -.++ ...=....+.+||+|||| .++.++|+|||++++..+..++.+.
T Consensus 12 ~~~dlig~--~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~lll~GPpG--~GKTt~a~~la~~~~~~~~~~~~~~ 87 (253)
T d1sxja2 12 NLQQVCGN--KGSVMKLKNWLANWENSKKNSFKHAGKDGSGVFRAAMLYGPPG--IGKTTAAHLVAQELGYDILEQNASD 87 (253)
T ss_dssp SGGGCCSC--HHHHHHHHHHHHTHHHHHHTTTCCCCTTSTTSCSEEEEECSTT--SSHHHHHHHHHHHTTCEEEEECTTS
T ss_pred CHHHHCCC--HHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCEEEEECCCC--CCHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 99996698--9999999999996253002343232025788874499987999--9888999999999875120134432
Q ss_pred CCC
Q ss_conf 579
Q 000823 504 LLG 506 (1267)
Q Consensus 504 ~~g 506 (1267)
...
T Consensus 88 ~~~ 90 (253)
T d1sxja2 88 VRS 90 (253)
T ss_dssp CCC
T ss_pred CHH
T ss_conf 211
No 59
>d1um8a_ c.37.1.20 (A:) ClpX {Helicobacter pylori [TaxId: 210]}
Probab=97.68 E-value=0.00067 Score=42.92 Aligned_cols=69 Identities=30% Similarity=0.408 Sum_probs=50.4
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCC---------------CCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCEEEEEE
Q ss_conf 4589999988763036875112123---------------3346899136406897058899999999857199099983
Q 000823 436 ENTKNVLIAASYIHLKHKDHAKYTS---------------ELTTVNPRILLSGPAGSEIYQEMLAKALAHYFGAKLLIFD 500 (1267)
Q Consensus 436 e~tk~~L~~~~~~hL~~~~~~~~~~---------------~L~~~s~rILLsgp~GsE~Yqe~LaKALA~~f~a~LL~lD 500 (1267)
++.|-++--|.|-|.+-..+.+-.+ +-.-...-||+-||.| ++++-|||+||+..++++..+|
T Consensus 23 d~Akkava~Avrn~~rR~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~niLfiGPTG--vGKTElAk~LA~~~~~~~ir~D 100 (364)
T d1um8a_ 23 EQAKKVFSVAVYNHYKRLSFKEKLKKQDNQDSNVELEHLEEVELSKSNILLIGPTG--SGKTLMAQTLAKHLDIPIAISD 100 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHTTCCCCCEEEECCTT--SSHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCC--CCHHHHHHHHHHHCCCCEEEHH
T ss_conf 89999999999989988877887640444433111122334567875324418998--6378999999864435331112
Q ss_pred CCCCCC
Q ss_conf 456579
Q 000823 501 SHSLLG 506 (1267)
Q Consensus 501 ~~~~~g 506 (1267)
.+-+..
T Consensus 101 ~s~~~e 106 (364)
T d1um8a_ 101 ATSLTE 106 (364)
T ss_dssp GGGCC-
T ss_pred HHHCCC
T ss_conf 220144
No 60
>d2a5yb3 c.37.1.20 (B:109-385) CED-4, NB-ARC domain {Caenorhabditis elegans [TaxId: 6239]}
Probab=97.67 E-value=0.002 Score=39.33 Aligned_cols=186 Identities=16% Similarity=0.142 Sum_probs=96.8
Q ss_pred HHHHHHCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHH-
Q ss_conf 9999833768999987561000140999999999985725762566308988898249999589983999999999991-
Q 000823 916 FEKRLLADVIPPSDIGVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEA- 994 (1267)
Q Consensus 916 le~~li~~ii~~~~~~vt~ddI~Gle~vk~~L~e~I~~pl~~~e~f~k~~~~kP~~gILL~GPpGTGKT~LAkAIA~el- 994 (1267)
+...+...-+|... ++.|.+...+.+.+.+..- . .....-+.|+|..|+|||+||+.+.+..
T Consensus 7 ~~~~l~~~~~p~~~------~~~gR~~~~~~i~~~L~~~----------~-~~~~~~v~I~GmgGiGKTtLA~~v~~~~~ 69 (277)
T d2a5yb3 7 LDRKLLLGNVPKQM------TCYIREYHVDRVIKKLDEM----------C-DLDSFFLFLHGRAGSGKSVIASQALSKSD 69 (277)
T ss_dssp HHHHHHHTTCBCCC------CSCCCHHHHHHHHHHHHHH----------T-TSSSEEEEEECSTTSSHHHHHHHHHHHCS
T ss_pred HCCCCCCCCCCCCC------CEECCHHHHHHHHHHHHHC----------C-CCCCEEEEEECCCCCCHHHHHHHHHHHHH
T ss_conf 22001146899988------6237399999999998734----------6-87840899977997888999999998556
Q ss_pred ---CCCE---EEEECCCCCHH------------------------CCCCCHHHHHH-HHHHHHHCCCEEEEECCCHHHHC
Q ss_conf ---9956---99611100010------------------------02751899999-99998712991799935212213
Q 000823 995 ---GANF---INISMSSITSK------------------------WFGEGEKYVKA-VFSLASKIAPSVIFVDEVDSMLG 1043 (1267)
Q Consensus 995 ---g~~v---i~Id~seL~s~------------------------~~Ge~ek~I~~-iF~~A~k~~PsIIiIDEID~L~~ 1043 (1267)
+..| +.++.+..... ........... .....-....++|++|+++..
T Consensus 70 ~~~~~~f~~~~Wv~vs~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~kr~LlVLDDv~~~-- 147 (277)
T d2a5yb3 70 QLIGINYDSIVWLKDSGTAPKSTFDLFTDILLMLKSEDDLLNFPSVEHVTSVVLKRMICNALIDRPNTLFVFDDVVQE-- 147 (277)
T ss_dssp STBTTTBSEEEEEECCCCSTTHHHHHHHHHHHHHTTTSCCTTCCCCTTCCHHHHHHHHHHHHTTSTTEEEEEEEECCH--
T ss_pred HHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHH--
T ss_conf 554012764899993687777789999999998722022027863212336999999999984468816752506677--
Q ss_pred CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
Q ss_conf 89998437999999886554216886567776899994399999959998203544369999988999999999830799
Q 000823 1044 RRENPGEHEAMRKMKNEFMVNWDGLRTKDTERILVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNRAKILQVILAKEDL 1123 (1267)
Q Consensus 1044 ~r~~~~~~~a~~~il~~LL~~ldgl~~~~~~~VlVIaTTN~p~~Ld~aLlrRFd~~I~v~~Pd~eeR~eILk~ll~k~~l 1123 (1267)
...+ .+. .....+|.||....... .+.... ..+.+..++.++-.++|.........
T Consensus 148 --------~~~~----~~~----------~~~srilvTTR~~~v~~-~~~~~~-~~~~l~~L~~~ea~~Lf~~~~~~~~~ 203 (277)
T d2a5yb3 148 --------ETIR----WAQ----------ELRLRCLVTTRDVEISN-AASQTC-EFIEVTSLEIDECYDFLEAYGMPMPV 203 (277)
T ss_dssp --------HHHH----HHH----------HTTCEEEEEESBGGGGG-GCCSCE-EEEECCCCCHHHHHHHHHHTSCCCC-
T ss_pred --------HHHH----HHC----------CCCCEEEEEEEHHHHHH-HCCCCC-CEEECCCCCHHHHHHHHHHHHCCCCC
T ss_conf --------6655----520----------45755999964489998-637887-16877889979999999998477667
Q ss_pred CCC-CC-HHHHHHHCCCCCHHHHH
Q ss_conf 990-30-99999982799899999
Q 000823 1124 SPD-VD-FDAIANMTDGYSGSDLK 1145 (1267)
Q Consensus 1124 ~~d-id-l~~LA~~TeGySg~DLk 1145 (1267)
.+. .+ ...++..+.| .|-.|+
T Consensus 204 ~~~~~~~~~~iv~~c~G-lPLAl~ 226 (277)
T d2a5yb3 204 GEKEEDVLNKTIELSSG-NPATLM 226 (277)
T ss_dssp -CHHHHHHHHHHHHHTT-CHHHHH
T ss_pred CHHHHHHHHHHHHHHCC-CHHHHH
T ss_conf 42567999999999589-989999
No 61
>d1p9ra_ c.37.1.11 (A:) Extracellular secretion NTPase EpsE {Vibrio cholerae [TaxId: 666]}
Probab=97.37 E-value=0.0011 Score=41.27 Aligned_cols=99 Identities=18% Similarity=0.286 Sum_probs=67.1
Q ss_pred CCCCCCCCHHCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHH---CCCEEEE-E
Q ss_conf 99987561000140999999999985725762566308988898249999589983999999999991---9956996-1
Q 000823 927 PSDIGVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEA---GANFINI-S 1002 (1267)
Q Consensus 927 ~~~~~vt~ddI~Gle~vk~~L~e~I~~pl~~~e~f~k~~~~kP~~gILL~GPpGTGKT~LAkAIA~el---g~~vi~I-d 1002 (1267)
......++++++-.....+.+++.+. .+.+-+|+.||+|+|||++..++..++ +.+++.+ +
T Consensus 130 ~~~~~~~l~~LG~~~~~~~~l~~l~~---------------~~~GliLvtGpTGSGKSTTl~~~l~~~~~~~~~i~tiEd 194 (401)
T d1p9ra_ 130 KNATRLDLHSLGMTAHNHDNFRRLIK---------------RPHGIILVTGPTGSGKSTTLYAGLQELNSSERNILTVED 194 (401)
T ss_dssp TTTTCCCGGGSCCCHHHHHHHHHHHT---------------SSSEEEEEECSTTSCHHHHHHHHHHHHCCTTSCEEEEES
T ss_pred CCCCCHHHHHHCCCHHHHHHHHHHHH---------------HHHCEEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEECC
T ss_conf 23320014430135777899999986---------------410548987678777447799986662578746999626
Q ss_pred CCCCCHHCC------CCCHHHHHHHHHHHHHCCCEEEEECCCHH
Q ss_conf 110001002------75189999999998712991799935212
Q 000823 1003 MSSITSKWF------GEGEKYVKAVFSLASKIAPSVIFVDEVDS 1040 (1267)
Q Consensus 1003 ~seL~s~~~------Ge~ek~I~~iF~~A~k~~PsIIiIDEID~ 1040 (1267)
..++.-... +.........+..+-+..|.||+|.||-.
T Consensus 195 PiE~~~~~~~q~~v~~~~~~~~~~~l~~~lR~dPDvi~igEiRd 238 (401)
T d1p9ra_ 195 PIEFDIDGIGQTQVNPRVDMTFARGLRAILRQDPDVVMVGEIRD 238 (401)
T ss_dssp SCCSCCSSSEEEECBGGGTBCHHHHHHHHGGGCCSEEEESCCCS
T ss_pred CCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCEEEECCCCC
T ss_conf 74345678870265587677999999999841388898457687
No 62
>d1sxje2 c.37.1.20 (E:4-255) Replication factor C5 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=97.29 E-value=0.0036 Score=37.46 Aligned_cols=75 Identities=9% Similarity=0.110 Sum_probs=56.6
Q ss_pred CCEEEEECCHHHHHCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCC
Q ss_conf 98499972504341389422567899872199948999410357883345899986201347731111013578843443
Q 000823 691 CPFILFMKDAEKSIAGNSDSYSTFKSRLEKLPDKVIVIGSHTHTDNRKEKSHPGGLLFTKFGSNQTALLDLAFPDSFGRL 770 (1267)
Q Consensus 691 ~p~Ilfi~di~~~l~g~~~~~~~lk~~L~~l~g~vvvIGs~~~~d~~~~~~~~~~~~l~~~g~~~~~l~d~a~~~~~~r~ 770 (1267)
...|++|||+|.+ ..+..+.+...++..+.++++|..++..+..
T Consensus 131 ~~~iiiide~d~l---~~~~~~~l~~~~e~~~~~~~~Il~tn~~~~i--------------------------------- 174 (252)
T d1sxje2 131 RYKCVIINEANSL---TKDAQAALRRTMEKYSKNIRLIMVCDSMSPI--------------------------------- 174 (252)
T ss_dssp CCEEEEEECTTSS---CHHHHHHHHHHHHHSTTTEEEEEEESCSCSS---------------------------------
T ss_pred CCEEEEECCCCCC---CCCCCHHHHCCCCCCCCCCCCEEEECCCCCH---------------------------------
T ss_conf 7249994243334---5431112210022135664300010211100---------------------------------
Q ss_pred CCCCCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHH
Q ss_conf 335787036788984208973997079878899999985465
Q 000823 771 HDRGKEIPKATKLLTKLFPNKVTIHMPQDEALLASWKHQLDR 812 (1267)
Q Consensus 771 ~~~~~~~~~~d~~l~rlFp~~IeI~LPdeE~RL~Ilk~qLek 812 (1267)
..+|-.|| ..|.|+.|+.+...++++..+..
T Consensus 175 ----------~~~l~sR~-~~i~~~~~~~~~~~~~l~~i~~~ 205 (252)
T d1sxje2 175 ----------IAPIKSQC-LLIRCPAPSDSEISTILSDVVTN 205 (252)
T ss_dssp ----------CHHHHTTS-EEEECCCCCHHHHHHHHHHHHHH
T ss_pred ----------HHHHHCCH-HEEEECCCCHHHHHHHHHHHHHH
T ss_conf ----------25442100-02430353304689999999998
No 63
>d1tf7a2 c.37.1.11 (A:256-497) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=97.22 E-value=0.0057 Score=35.98 Aligned_cols=107 Identities=18% Similarity=0.149 Sum_probs=60.8
Q ss_pred CCCEEEEECCCCCHHHHHHHHHHHHH---CCCEEEEECCCCCHH----------------------------CCCCCHHH
Q ss_conf 98249999589983999999999991---995699611100010----------------------------02751899
Q 000823 969 PCKGILLFGPPGTGKTMLAKAVATEA---GANFINISMSSITSK----------------------------WFGEGEKY 1017 (1267)
Q Consensus 969 P~~gILL~GPpGTGKT~LAkAIA~el---g~~vi~Id~seL~s~----------------------------~~Ge~ek~ 1017 (1267)
+..-++|+||||+|||.++..+|... +..++.++..+-... ........
T Consensus 25 ~gsl~li~G~pGsGKT~l~~qia~~~~~~~~~~~~is~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (242)
T d1tf7a2 25 KDSIILATGATGTGKTLLVSRFVENACANKERAILFAYEESRAQLLRNAYSWGMDFEEMERQNLLKIVCAYPESAGLEDH 104 (242)
T ss_dssp SSCEEEEEECTTSSHHHHHHHHHHHHHTTTCCEEEEESSSCHHHHHHHHHTTSCCHHHHHHTTSEEECCCCGGGSCHHHH
T ss_pred CCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHCCCCHHHHHHCCCEEEEEEECCHHHHHHH
T ss_conf 98499999189999999999999999872324411212679999999999829986998545861799730001017999
Q ss_pred HHHHHHHHHHCCCEEEEECCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECC
Q ss_conf 999999987129917999352122138999843799999988655421688656777689999439
Q 000823 1018 VKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDTERILVLAATN 1083 (1267)
Q Consensus 1018 I~~iF~~A~k~~PsIIiIDEID~L~~~r~~~~~~~a~~~il~~LL~~ldgl~~~~~~~VlVIaTTN 1083 (1267)
+..+........+.+++||.++.++... ........+..++..... .+..++++..++
T Consensus 105 ~~~i~~~i~~~~~~~vviDs~~~~~~~~----~~~~~~~~~~~l~~~~~~----~~~~~i~~~~~~ 162 (242)
T d1tf7a2 105 LQIIKSEINDFKPARIAIDSLSALARGV----SNNAFRQFVIGVTGYAKQ----EEITGLFTNTSD 162 (242)
T ss_dssp HHHHHHHHHTTCCSEEEEECHHHHTSSS----CHHHHHHHHHHHHHHHHH----TTCEEEEEEECS
T ss_pred HHHHHHHHHHCCCCEEEEECCHHHHCCC----CHHHHHHHHHHHHHHHHH----CCCEEEEEEEEE
T ss_conf 9999999984088533220431430489----999999999999999998----698399998567
No 64
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR, ribosylnicotinamide kinase domain {Haemophilus influenzae [TaxId: 727]}
Probab=97.18 E-value=0.00015 Score=47.76 Aligned_cols=40 Identities=15% Similarity=0.163 Sum_probs=34.3
Q ss_pred CCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCCCHH
Q ss_conf 8249999589983999999999991995699611100010
Q 000823 970 CKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSK 1009 (1267)
Q Consensus 970 ~~gILL~GPpGTGKT~LAkAIA~elg~~vi~Id~seL~s~ 1009 (1267)
++.|+|.||||+|||+||++||..++.+++..+...+...
T Consensus 7 ~K~I~i~G~~GsGKTTla~~La~~~~~~~i~~~~~~~~~~ 46 (192)
T d1lw7a2 7 AKTVAILGGESSGKSVLVNKLAAVFNTTSAWEYGREFVFE 46 (192)
T ss_dssp CEEEEEECCTTSHHHHHHHHHHHHTTCEEECCTTHHHHHH
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEHHHHHHH
T ss_conf 3289998999998999999999984998675316777665
No 65
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli [TaxId: 562]}
Probab=97.16 E-value=0.0004 Score=44.63 Aligned_cols=32 Identities=28% Similarity=0.638 Sum_probs=28.9
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHHCCCEEEEE
Q ss_conf 24999958998399999999999199569961
Q 000823 971 KGILLFGPPGTGKTMLAKAVATEAGANFINIS 1002 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkAIA~elg~~vi~Id 1002 (1267)
+.|+|.||||+|||++|+.||..++++|+..+
T Consensus 3 k~I~l~G~~GsGKSTvak~La~~L~~~~id~~ 34 (169)
T d1kaga_ 3 RNIFLVGPMGAGKSTIGRQLAQQLNMEFYDSD 34 (169)
T ss_dssp CCEEEECCTTSCHHHHHHHHHHHTTCEEEEHH
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHCCCEEEEC
T ss_conf 74999899999999999999999699969500
No 66
>d1qvra3 c.37.1.20 (A:536-850) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=97.12 E-value=0.0042 Score=36.97 Aligned_cols=37 Identities=27% Similarity=0.440 Sum_probs=32.5
Q ss_pred CEEEECCCCCHHHHHHHHHHHHHHH---CCEEEEEECCCCCC
Q ss_conf 1364068970588999999998571---99099983456579
Q 000823 468 RILLSGPAGSEIYQEMLAKALAHYF---GAKLLIFDSHSLLG 506 (1267)
Q Consensus 468 rILLsgp~GsE~Yqe~LaKALA~~f---~a~LL~lD~~~~~g 506 (1267)
-|||.||+| ..++.|||+||+.+ +.+++-+|.+.+..
T Consensus 55 ~~lf~Gp~G--~GKt~lak~la~~l~~~~~~~~~~~~~~~~~ 94 (315)
T d1qvra3 55 SFLFLGPTG--VGKTELAKTLAATLFDTEEAMIRIDMTEYME 94 (315)
T ss_dssp EEEEBSCSS--SSHHHHHHHHHHHHHSSGGGEEEECTTTCCS
T ss_pred EEEEECCCC--CHHHHHHHHHHHHHCCCCCCEEEEECCCCCC
T ss_conf 999978886--2489999999998358875348873155454
No 67
>d1g41a_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=97.05 E-value=0.00025 Score=46.18 Aligned_cols=180 Identities=25% Similarity=0.369 Sum_probs=118.2
Q ss_pred HCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCCCH-HCCCCC
Q ss_conf 0014099999999998572576256630898889824999958998399999999999199569961110001-002751
Q 000823 936 DIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITS-KWFGEG 1014 (1267)
Q Consensus 936 dI~Gle~vk~~L~e~I~~pl~~~e~f~k~~~~kP~~gILL~GPpGTGKT~LAkAIA~elg~~vi~Id~seL~s-~~~Ge~ 1014 (1267)
-++|+++.|+.|--.+....++...-......-.+.+|||.||+|||||+||++||+.++.||+.+++..|.. .|.|..
T Consensus 15 yVvGQ~~AKk~lsvav~nhyrR~~~~~~~~~ei~ksNILliGPTGvGKTlLAr~LAk~l~VPFv~~daT~fTeaGYvG~D 94 (443)
T d1g41a_ 15 HIIGQADAKRAVAIALRNRWRRMQLQEPLRHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVGYVGKE 94 (443)
T ss_dssp TCCSCHHHHHHHHHHHHHHHHHHHSCTTTTTTCCCCCEEEECCTTSSHHHHHHHHHHHTTCCEEEEEGGGGC----CCCC
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCEEEECCEEECC
T ss_conf 02280899999999999999886236544444565647998999988999999999873898898625511411111044
Q ss_pred -HHHHHHHHHHHHH------------------------------------------------------------------
Q ss_conf -8999999999871------------------------------------------------------------------
Q 000823 1015 -EKYVKAVFSLASK------------------------------------------------------------------ 1027 (1267)
Q Consensus 1015 -ek~I~~iF~~A~k------------------------------------------------------------------ 1027 (1267)
+..++.+...|..
T Consensus 95 Vesii~~L~~~a~~~v~~~e~~~V~~~~~~~~~e~~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~G~~~~~~~~~ 174 (443)
T d1g41a_ 95 VDSIIRDLTDSAMKLVRQQEIAKNRARAEDVAEERILDALLPPAKNQWGEVENHDSHSSTRQAFRKKLREGQLDDKEIEI 174 (443)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHSCC-------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 45789999998755089999999999999988888998741333566554332100134667799997458855543434
Q ss_pred -------------------------------------------------------------------------CCCEEEE
Q ss_conf -------------------------------------------------------------------------2991799
Q 000823 1028 -------------------------------------------------------------------------IAPSVIF 1034 (1267)
Q Consensus 1028 -------------------------------------------------------------------------~~PsIIi 1034 (1267)
...+++|
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~~~~~~~~~~~~i~~~ai~~v~~~~~~~ 254 (443)
T d1g41a_ 175 DVSAGVSMGVEIMAPPGMEEMTNQLQSLFQNLGSDKTKKRKMKIKDALKALIDDEAAKLINPEELKQKAIDAVEQNGIVF 254 (443)
T ss_dssp --------------------------------------------------CCGGGSCSSCCHHHHHHHHHHHHHHHCEEE
T ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCC
T ss_conf 44567786654456531012212677764124776553123313777888777776521442678999999874267555
Q ss_pred ECCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCC------CCCCCEEEEEECC----CCCCCCHHHHHCCCCCCCCCC
Q ss_conf 935212213899984379999998865542168865------6777689999439----999995999820354436999
Q 000823 1035 VDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRT------KDTERILVLAATN----RPFDLDEAVIRRLPRRLMVNL 1104 (1267)
Q Consensus 1035 IDEID~L~~~r~~~~~~~a~~~il~~LL~~ldgl~~------~~~~~VlVIaTTN----~p~~Ld~aLlrRFd~~I~v~~ 1104 (1267)
+||++.........+.......+...++..+.+... .....+++|+... .+..+-|+|.-||+.++.+..
T Consensus 255 ~dei~k~~~~~~~~g~d~~~eg~~~~ll~~~e~~~v~~~~~~~~~~~~l~i~~~~~~~~~~~gliPEliGRlPi~v~L~~ 334 (443)
T d1g41a_ 255 IDEIDKICKKGEYSGADVSREGVQRDLLPLVEGSTVSTKHGMVKTDHILFIASGAFQVARPSDLIPELQGRLPIRVELTA 334 (443)
T ss_dssp EETGGGGSCCSSCSSSHHHHHHHHHHHHHHHHCCEEEETTEEEECTTCEEEEEECCSSCCGGGSCHHHHTTCCEEEECCC
T ss_pred CCHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCHHHCCCCCCHHHHCCCEEEEEECCC
T ss_conf 42233443035677877430013454432014665455566445421000146522221544321533463589997467
Q ss_pred CCHHHHHHHHH
Q ss_conf 99889999999
Q 000823 1105 PDAPNRAKILQ 1115 (1267)
Q Consensus 1105 Pd~eeR~eILk 1115 (1267)
++.++..+||.
T Consensus 335 L~~~dL~rILt 345 (443)
T d1g41a_ 335 LSAADFERILT 345 (443)
T ss_dssp CCHHHHHHHHH
T ss_pred CCHHHHHHHHH
T ss_conf 44999999987
No 68
>d1ixsb2 c.37.1.20 (B:4-242) Holliday junction helicase RuvB {Thermus thermophilus [TaxId: 274]}
Probab=97.04 E-value=0.0011 Score=41.42 Aligned_cols=65 Identities=23% Similarity=0.337 Sum_probs=51.9
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCEEEEEECCCC
Q ss_conf 2233443430458999998876303687511212333468991364068970588999999998571990999834565
Q 000823 426 SFENFPYYLSENTKNVLIAASYIHLKHKDHAKYTSELTTVNPRILLSGPAGSEIYQEMLAKALAHYFGAKLLIFDSHSL 504 (1267)
Q Consensus 426 sf~~FPYylse~tk~~L~~~~~~hL~~~~~~~~~~~L~~~s~rILLsgp~GsE~Yqe~LaKALA~~f~a~LL~lD~~~~ 504 (1267)
|||+| +-.|++|..|......+...+.. .+.+||+|||| +++++|||++|++++..+..+..+.+
T Consensus 7 ~~ddi--vGq~~~~~~L~~~i~~~~~~~~~----------~~~~Ll~GPpG--~GKTtla~~la~~~~~~~~~~~~~~~ 71 (239)
T d1ixsb2 7 TLDEY--IGQERLKQKLRVYLEAAKARKEP----------LEHLLLFGPPG--LGKTTLAHVIAHELGVNLRVTSGPAI 71 (239)
T ss_dssp SGGGS--CSCHHHHHHHHHHHHHHTTSSSC----------CCCEEEECCTT--SCHHHHHHHHHHHHTCCEEEEETTTC
T ss_pred CHHHH--CCHHHHHHHHHHHHHHHHHCCCC----------CCEEEEECCCC--CCHHHHHHHHHHHHCCCEEECCCCCC
T ss_conf 88894--89899999999999978735888----------87389889799--87888999999984987475468753
No 69
>d1r6bx3 c.37.1.20 (X:437-751) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=97.03 E-value=0.01 Score=34.08 Aligned_cols=63 Identities=19% Similarity=0.276 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCC
Q ss_conf 45899999887630368751121233346899136406897058899999999857199099983456579
Q 000823 436 ENTKNVLIAASYIHLKHKDHAKYTSELTTVNPRILLSGPAGSEIYQEMLAKALAHYFGAKLLIFDSHSLLG 506 (1267)
Q Consensus 436 e~tk~~L~~~~~~hL~~~~~~~~~~~L~~~s~rILLsgp~GsE~Yqe~LaKALA~~f~a~LL~lD~~~~~g 506 (1267)
|+.+..+..+.+.|... +.+ -...-.-+||.||+| .+++.|||+||+.++.+++.+|.+.|..
T Consensus 28 ~~a~~~v~~~v~~~~~~--l~~----~~~p~~~~lf~Gp~G--vGKT~lak~la~~l~~~~i~~d~s~~~~ 90 (315)
T d1r6bx3 28 DKAIEALTEAIKMARAG--LGH----EHKPVGSFLFAGPTG--VGKTEVTVQLSKALGIELLRFDMSEYME 90 (315)
T ss_dssp HHHHHHHHHHHHHHHTT--CSC----TTSCSEEEEEECSTT--SSHHHHHHHHHHHHTCEEEEEEGGGCSS
T ss_pred HHHHHHHHHHHHHHHCC--CCC----CCCCCEEEEEECCCC--CHHHHHHHHHHHHCCCCEEEECCCCCCC
T ss_conf 99999999999999726--788----888765899977875--0069999999863367706741544455
No 70
>d1svma_ c.37.1.20 (A:) Papillomavirus large T antigen helicase domain {Simian virus 40 [TaxId: 10633]}
Probab=97.00 E-value=7.4e-05 Score=50.08 Aligned_cols=38 Identities=26% Similarity=0.242 Sum_probs=32.8
Q ss_pred CCCCCEEEECCCCCHHHHHHHHHHHHHHHCCEEEEEECCC
Q ss_conf 6899136406897058899999999857199099983456
Q 000823 464 TVNPRILLSGPAGSEIYQEMLAKALAHYFGAKLLIFDSHS 503 (1267)
Q Consensus 464 ~~s~rILLsgp~GsE~Yqe~LaKALA~~f~a~LL~lD~~~ 503 (1267)
|-.+.+||+|||| .++.++|+|||++++.+++.+..++
T Consensus 152 ~~~~~~~~~g~~~--~gk~~~~~~~~~~~~~~~i~in~s~ 189 (362)
T d1svma_ 152 PKKRYWLFKGPID--SGKTTLAAALLELCGGKALNVNLPL 189 (362)
T ss_dssp TTCCEEEEECSTT--SSHHHHHHHHHHHHCCEEECCSSCT
T ss_pred CCCCEEEEECCCC--CCHHHHHHHHHHHCCCCEEEEECCC
T ss_conf 9767699989999--8889999999998599789997742
No 71
>d1u94a1 c.37.1.11 (A:6-268) RecA protein, ATPase-domain {Escherichia coli [TaxId: 562]}
Probab=96.84 E-value=0.004 Score=37.13 Aligned_cols=75 Identities=27% Similarity=0.292 Sum_probs=47.0
Q ss_pred CCCEEEEECCCCCHHHHHHHHHHHHH---CCCEEEEECCCCCHH----------------CCCCCHHHHHHHHHHHHHCC
Q ss_conf 98249999589983999999999991---995699611100010----------------02751899999999987129
Q 000823 969 PCKGILLFGPPGTGKTMLAKAVATEA---GANFINISMSSITSK----------------WFGEGEKYVKAVFSLASKIA 1029 (1267)
Q Consensus 969 P~~gILL~GPpGTGKT~LAkAIA~el---g~~vi~Id~seL~s~----------------~~Ge~ek~I~~iF~~A~k~~ 1029 (1267)
+..-++|+||||+|||+++-.++... +..+++++...-+.. .....|..+..+-...+..+
T Consensus 53 ~g~itei~G~~gsGKTtl~l~~~~~~q~~g~~~vyidtE~~~~~~~a~~~Gvd~d~v~~~~~~~~E~~~~~i~~l~~~~~ 132 (263)
T d1u94a1 53 MGRIVEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYARKLGVDIDNLLCSQPDTGEQALEICDALARSGA 132 (263)
T ss_dssp TTSEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESSCCCCHHHHHHTTCCGGGCEEECCSSHHHHHHHHHHHHHHTC
T ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHCCCHHHEEEECCCCHHHHHHHHHHHHHCCC
T ss_conf 73589980577747899999999998708987999865445489999983998799799628989999999999985499
Q ss_pred CEEEEECCCHHHHC
Q ss_conf 91799935212213
Q 000823 1030 PSVIFVDEVDSMLG 1043 (1267)
Q Consensus 1030 PsIIiIDEID~L~~ 1043 (1267)
+.+|+||-|..+++
T Consensus 133 ~~liViDSi~al~~ 146 (263)
T d1u94a1 133 VDVIVVDSVAALTP 146 (263)
T ss_dssp CSEEEEECGGGCCC
T ss_pred CCEEEEECCCCCCC
T ss_conf 98999988655666
No 72
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens), isoenzyme 6 [TaxId: 9606]}
Probab=96.78 E-value=0.00052 Score=43.74 Aligned_cols=32 Identities=47% Similarity=0.838 Sum_probs=28.8
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHHCCCEEEEE
Q ss_conf 24999958998399999999999199569961
Q 000823 971 KGILLFGPPGTGKTMLAKAVATEAGANFINIS 1002 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkAIA~elg~~vi~Id 1002 (1267)
..|+|.||||+|||++|+.||..++++++.++
T Consensus 5 ~~I~i~G~pGsGKTTia~~La~~l~~~~i~~~ 36 (173)
T d1rkba_ 5 PNILLTGTPGVGKTTLGKELASKSGLKYINVG 36 (173)
T ss_dssp CCEEEECSTTSSHHHHHHHHHHHHCCEEEEHH
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHCCCEEECH
T ss_conf 97989899999989999999999799589516
No 73
>d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni [TaxId: 197]}
Probab=96.74 E-value=0.00056 Score=43.53 Aligned_cols=32 Identities=34% Similarity=0.587 Sum_probs=29.2
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHHCCCEEEEE
Q ss_conf 24999958998399999999999199569961
Q 000823 971 KGILLFGPPGTGKTMLAKAVATEAGANFINIS 1002 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkAIA~elg~~vi~Id 1002 (1267)
++|+|.|+||+|||++++.+|..++++|+.++
T Consensus 1 k~I~liG~~GsGKsTi~k~La~~l~~~~~d~d 32 (161)
T d1viaa_ 1 KNIVFIGFMGSGKSTLARALAKDLDLVFLDSD 32 (161)
T ss_dssp CCEEEECCTTSCHHHHHHHHHHHHTCEEEEHH
T ss_pred CCEEEECCCCCCHHHHHHHHHHHHCCCEEECC
T ss_conf 93999899999889999999998399878367
No 74
>d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal recognition particle receptor FtsY {Thermus aquaticus [TaxId: 271]}
Probab=96.74 E-value=0.015 Score=32.87 Aligned_cols=114 Identities=18% Similarity=0.198 Sum_probs=56.2
Q ss_pred CCEEEEECCCCCHHHHHHHHHHHHH---CCCEEEEECCCCCH----------H----------CCCCCHHHHHHHHHHHH
Q ss_conf 8249999589983999999999991---99569961110001----------0----------02751899999999987
Q 000823 970 CKGILLFGPPGTGKTMLAKAVATEA---GANFINISMSSITS----------K----------WFGEGEKYVKAVFSLAS 1026 (1267)
Q Consensus 970 ~~gILL~GPpGTGKT~LAkAIA~el---g~~vi~Id~seL~s----------~----------~~Ge~ek~I~~iF~~A~ 1026 (1267)
++-++|.||+|+|||+.+.-+|..+ +..+.-+.+-.+.. + ...+....+......++
T Consensus 6 ~~vi~lvGptGvGKTTTiaKLA~~~~~~g~kV~lit~Dt~R~gA~eQL~~~a~~l~i~~~~~~~~~d~~~~~~~~~~~~~ 85 (207)
T d1okkd2 6 GRVVLVVGVNGVGKTTTIAKLGRYYQNLGKKVMFCAGDTFRAAGGTQLSEWGKRLSIPVIQGPEGTDPAALAYDAVQAMK 85 (207)
T ss_dssp SSEEEEECSTTSSHHHHHHHHHHHHHTTTCCEEEECCCCSSTTHHHHHHHHHHHHTCCEECCCTTCCHHHHHHHHHHHHH
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHH
T ss_conf 77999989999988999999999999779907999813666540266764054568238961677427889999899999
Q ss_pred HCCCEEEEECCCHHHHCCCCCCCHHHHHHHH--HHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCHH
Q ss_conf 1299179993521221389998437999999--8865542168865677768999943999999599
Q 000823 1027 KIAPSVIFVDEVDSMLGRRENPGEHEAMRKM--KNEFMVNWDGLRTKDTERILVLAATNRPFDLDEA 1091 (1267)
Q Consensus 1027 k~~PsIIiIDEID~L~~~r~~~~~~~a~~~i--l~~LL~~ldgl~~~~~~~VlVIaTTN~p~~Ld~a 1091 (1267)
.....+|+||-.-... .....+..+ +......++... +...++|+.++...+.++..
T Consensus 86 ~~~~d~ilIDTaGr~~------~d~~l~~el~~~~~~~~~~~~~~--p~~~~LVl~a~~~~~~~~~~ 144 (207)
T d1okkd2 86 ARGYDLLFVDTAGRLH------TKHNLMEELKKVKRAIAKADPEE--PKEVWLVLDAVTGQNGLEQA 144 (207)
T ss_dssp HHTCSEEEECCCCCCT------TCHHHHHHHHHHHHHHHHHCTTC--CSEEEEEEETTBCTHHHHHH
T ss_pred HCCCCEEECCCCCCCH------HHHHHHHHHHHHHHHHHHCCCCC--CCEEEEEEECCCCCHHHHHH
T ss_conf 8799999717522231------12778888777777765325678--73599996200471678999
No 75
>d1tuea_ c.37.1.20 (A:) Replication protein E1 helicase domain {Human papillomavirus type 18 [TaxId: 333761]}
Probab=96.66 E-value=0.0097 Score=34.28 Aligned_cols=123 Identities=16% Similarity=0.161 Sum_probs=65.5
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCCCHHCCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHCCCCCCCH
Q ss_conf 24999958998399999999999199569961110001002751899999999987129917999352122138999843
Q 000823 971 KGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGE 1050 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkAIA~elg~~vi~Id~seL~s~~~Ge~ek~I~~iF~~A~k~~PsIIiIDEID~L~~~r~~~~~ 1050 (1267)
+.++|+|||+||||++|.+|++.++..++...-+. +. |....-..-.++++||+...+
T Consensus 54 n~i~~~GP~~TGKS~f~~sl~~~l~G~vis~~N~~--s~------------F~Lq~l~~~kv~l~dD~t~~~-------- 111 (205)
T d1tuea_ 54 NCLVFCGPANTGKSYFGMSFIHFIQGAVISFVNST--SH------------FWLEPLTDTKVAMLDDATTTC-------- 111 (205)
T ss_dssp SEEEEESCGGGCHHHHHHHHHHHHTCEECCCCCSS--SC------------GGGGGGTTCSSEEEEEECHHH--------
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHCCEEEECCCCC--CC------------CCCCCCCCCEEEEEECCCCCH--------
T ss_conf 18999889985689999999998288788336788--87------------536653478699996055316--------
Q ss_pred HHHHHHHHHHH-HHHCCCCCC----CCC-----CCEEEEEECCCC---CCCCHHHHHCCCCCCCCC-------------C
Q ss_conf 79999998865-542168865----677-----768999943999---999599982035443699-------------9
Q 000823 1051 HEAMRKMKNEF-MVNWDGLRT----KDT-----ERILVLAATNRP---FDLDEAVIRRLPRRLMVN-------------L 1104 (1267)
Q Consensus 1051 ~~a~~~il~~L-L~~ldgl~~----~~~-----~~VlVIaTTN~p---~~Ld~aLlrRFd~~I~v~-------------~ 1104 (1267)
......+ -..++|-.. +.. ....+|.|+|.. ++-...|.+|. .++.|+ .
T Consensus 112 ----~~~~d~~lK~ll~G~~vsvd~KhK~~vqi~~pPliITsN~~~~~~d~~~~L~sRi-~~f~F~~~fP~~~~~~p~~~ 186 (205)
T d1tuea_ 112 ----WTYFDTYMRNALDGNPISIDRKHKPLIQLKCPPILLTTNIHPAKDNRWPYLESRI-TVFEFPNAFPFDKNGNPVYE 186 (205)
T ss_dssp ----HHHHHHHCHHHHHTCCEEEC----CCEEECCCCEEEEESSCTTSSSSCHHHHTSC-EEEECCSCCCBCTTSCBSCC
T ss_pred ----HHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHEE-EEEECCCCCCCCCCCCCCEE
T ss_conf ----7789999986228972565213588611258988997288988565515466517-99887995897889984201
Q ss_pred CCHHHHHHHHHHHHHH
Q ss_conf 9988999999999830
Q 000823 1105 PDAPNRAKILQVILAK 1120 (1267)
Q Consensus 1105 Pd~eeR~eILk~ll~k 1120 (1267)
.+.++-+.+++.+-..
T Consensus 187 l~~~~wk~Ff~~~w~~ 202 (205)
T d1tuea_ 187 INDKNWKCFFERTWSR 202 (205)
T ss_dssp CCHHHHHHHHHHHTGG
T ss_pred CCHHHHHHHHHHHHHH
T ss_conf 2724899999998986
No 76
>d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia chrysanthemi [TaxId: 556]}
Probab=96.66 E-value=0.0007 Score=42.77 Aligned_cols=32 Identities=25% Similarity=0.553 Sum_probs=29.0
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHHCCCEEEEE
Q ss_conf 24999958998399999999999199569961
Q 000823 971 KGILLFGPPGTGKTMLAKAVATEAGANFINIS 1002 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkAIA~elg~~vi~Id 1002 (1267)
..|+|.|+||+|||++|+.+|..++++|+..+
T Consensus 3 ~~Iil~G~~GsGKSTia~~LA~~Lg~~~id~D 34 (170)
T d1e6ca_ 3 EPIFMVGARGCGMTTVGRELARALGYEFVDTD 34 (170)
T ss_dssp CCEEEESCTTSSHHHHHHHHHHHHTCEEEEHH
T ss_pred CCEEEECCCCCCHHHHHHHHHHHHCCCEEEHH
T ss_conf 98899889999889999999999499878656
No 77
>d1xp8a1 c.37.1.11 (A:15-282) RecA protein, ATPase-domain {Deinococcus radiodurans [TaxId: 1299]}
Probab=96.64 E-value=0.013 Score=33.29 Aligned_cols=113 Identities=19% Similarity=0.235 Sum_probs=62.7
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHH---CCCEEEEECCCCCHH----------------CCCCCHHHHHHHHHHHHHCCCE
Q ss_conf 249999589983999999999991---995699611100010----------------0275189999999998712991
Q 000823 971 KGILLFGPPGTGKTMLAKAVATEA---GANFINISMSSITSK----------------WFGEGEKYVKAVFSLASKIAPS 1031 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkAIA~el---g~~vi~Id~seL~s~----------------~~Ge~ek~I~~iF~~A~k~~Ps 1031 (1267)
+-..|+||+|+|||++|..++... +..++++|...-+.. .....|..+..+-.......+.
T Consensus 58 ~itei~G~~~sGKT~l~l~~~~~aqk~g~~v~yiDtE~~~~~~~a~~~Gvd~d~i~~~~~~~~E~~~~~~~~l~~~~~~~ 137 (268)
T d1xp8a1 58 RITEIYGPESGGKTTLALAIVAQAQKAGGTCAFIDAEHALDPVYARALGVNTDELLVSQPDNGEQALEIMELLVRSGAID 137 (268)
T ss_dssp SEEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEESSCCCCHHHHHHTTCCGGGCEEECCSSHHHHHHHHHHHHTTTCCS
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHCCCCHHEEEECCCCHHHHHHHHHHHHHCCCCC
T ss_conf 47898058765227999999999970799899998876589999998289812379974899999999999998658971
Q ss_pred EEEECCCHHHHCCCCCCCH-H----HHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCC
Q ss_conf 7999352122138999843-7----9999998865542168865677768999943999
Q 000823 1032 VIFVDEVDSMLGRRENPGE-H----EAMRKMKNEFMVNWDGLRTKDTERILVLAATNRP 1085 (1267)
Q Consensus 1032 IIiIDEID~L~~~r~~~~~-~----~a~~~il~~LL~~ldgl~~~~~~~VlVIaTTN~p 1085 (1267)
+|+||-+..++++.+-... . ....+++..++..+..... ..++.+|.+..-.
T Consensus 138 liIiDSi~al~~r~e~~~~~~~~~~~~~a~~l~~~lr~l~~~~~--~~~~~vi~tNQv~ 194 (268)
T d1xp8a1 138 VVVVDSVAALTPRAEIEGDMGDSLPGLQARLMSQALRKLTAILS--KTGTAAIFINQVR 194 (268)
T ss_dssp EEEEECTTTCCCSTTC--------CCHHHHHHHHHHHHHHHHHT--TTCCEEEEEEEC-
T ss_pred EEEEECCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH--HCCCEEEEEEEEE
T ss_conf 99994545455388871653410577999999999999776664--3297699996786
No 78
>d2qy9a2 c.37.1.10 (A:285-495) GTPase domain of the signal recognition particle receptor FtsY {Escherichia coli [TaxId: 562]}
Probab=96.64 E-value=0.02 Score=31.97 Aligned_cols=115 Identities=14% Similarity=0.143 Sum_probs=60.2
Q ss_pred CCCEEEEECCCCCHHHHHHHHHHHHH---CCCEEEEECCCCCH--------------------HCCCCCHHHHHHHHHHH
Q ss_conf 98249999589983999999999991---99569961110001--------------------00275189999999998
Q 000823 969 PCKGILLFGPPGTGKTMLAKAVATEA---GANFINISMSSITS--------------------KWFGEGEKYVKAVFSLA 1025 (1267)
Q Consensus 969 P~~gILL~GPpGTGKT~LAkAIA~el---g~~vi~Id~seL~s--------------------~~~Ge~ek~I~~iF~~A 1025 (1267)
.+.-++|.||+|+|||+.+.-+|..+ +..+.-+.+-.+.. ....+....+......+
T Consensus 8 ~p~vi~lvGptGvGKTTTiAKLA~~~~~~g~kV~lit~Dt~R~gA~eQL~~~a~~l~v~~~~~~~~~d~~~~l~~~~~~a 87 (211)
T d2qy9a2 8 APFVILMVGVNGVGKTTTIGKLARQFEQQGKSVMLAAGDTFRAAAVEQLQVWGQRNNIPVIAQHTGADSASVIFDAIQAA 87 (211)
T ss_dssp TTEEEEEECCTTSCHHHHHHHHHHHHHTTTCCEEEECCCTTCHHHHHHHHHHHHHTTCCEECCSTTCCHHHHHHHHHHHH
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 99799998999999899999999999977994799823213666120455543433886211356877999999999999
Q ss_pred HHCCCEEEEECCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCC-CCCCEEEEEECCCCCCCCH
Q ss_conf 7129917999352122138999843799999988655421688656-7776899994399999959
Q 000823 1026 SKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTK-DTERILVLAATNRPFDLDE 1090 (1267)
Q Consensus 1026 ~k~~PsIIiIDEID~L~~~r~~~~~~~a~~~il~~LL~~ldgl~~~-~~~~VlVIaTTN~p~~Ld~ 1090 (1267)
+.....+|+||-.-..- ..... -.-+..+...+...... +...++|+-++...+.+..
T Consensus 88 ~~~~~d~ilIDTaGr~~------~d~~~-~~el~~l~~~~~~~~~~~p~~~~LVl~a~~~~~~~~~ 146 (211)
T d2qy9a2 88 KARNIDVLIADTAGRLQ------NKSHL-MEELKKIVRVMKKLDVEAPHEVMLTIDASTGQNAVSQ 146 (211)
T ss_dssp HHTTCSEEEECCCCCGG------GHHHH-HHHHHHHHHHHTTTCTTCCSEEEEEEEGGGTHHHHHH
T ss_pred HHCCCCEEEECCCCCCC------CCHHH-HHHHHHHHHHHHHHCCCCCCEEEEEHHCCCCCCHHHH
T ss_conf 87699889965688763------20778-9999999999853046686001220012357633778
No 79
>d1cr2a_ c.37.1.11 (A:) Gene 4 protein (g4p, DNA primase), helicase domain {Bacteriophage T7 [TaxId: 10760]}
Probab=96.60 E-value=0.018 Score=32.25 Aligned_cols=36 Identities=17% Similarity=0.204 Sum_probs=27.8
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHHHHH----CCCEEEEEC
Q ss_conf 898249999589983999999999991----995699611
Q 000823 968 KPCKGILLFGPPGTGKTMLAKAVATEA----GANFINISM 1003 (1267)
Q Consensus 968 kP~~gILL~GPpGTGKT~LAkAIA~el----g~~vi~Id~ 1003 (1267)
.|..-++|.|+||+|||+++..+|..+ +.++..+++
T Consensus 33 ~~G~l~vi~G~~G~GKT~~~~~la~~~a~~~g~~v~~~s~ 72 (277)
T d1cr2a_ 33 RGGEVIMVTSGSGMGKSTFVRQQALQWGTAMGKKVGLAML 72 (277)
T ss_dssp CTTCEEEEECSTTSSHHHHHHHHHHHHHHTSCCCEEEEES
T ss_pred CCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEE
T ss_conf 8980899994799979999999997265533663457640
No 80
>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=96.55 E-value=0.00099 Score=41.67 Aligned_cols=31 Identities=26% Similarity=0.615 Sum_probs=28.1
Q ss_pred EEEEECCCCCHHHHHHHHHHHHHCCCEEEEE
Q ss_conf 4999958998399999999999199569961
Q 000823 972 GILLFGPPGTGKTMLAKAVATEAGANFINIS 1002 (1267)
Q Consensus 972 gILL~GPpGTGKT~LAkAIA~elg~~vi~Id 1002 (1267)
.+.|.|+||+|||++++.+|..++++|+..+
T Consensus 3 ~IvliG~~G~GKSTig~~La~~l~~~fiD~D 33 (165)
T d2iyva1 3 KAVLVGLPGSGKSTIGRRLAKALGVGLLDTD 33 (165)
T ss_dssp SEEEECSTTSSHHHHHHHHHHHHTCCEEEHH
T ss_pred CEEEECCCCCCHHHHHHHHHHHHCCCEEEEC
T ss_conf 4899889999889999999998499869602
No 81
>d1w36d1 c.37.1.19 (D:2-360) Exodeoxyribonuclease V alpha chain (RecD) {Escherichia coli [TaxId: 562]}
Probab=96.52 E-value=0.016 Score=32.59 Aligned_cols=38 Identities=21% Similarity=0.207 Sum_probs=25.2
Q ss_pred CHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 0999999999985725762566308988898249999589983999999999991
Q 000823 940 LENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEA 994 (1267)
Q Consensus 940 le~vk~~L~e~I~~pl~~~e~f~k~~~~kP~~gILL~GPpGTGKT~LAkAIA~el 994 (1267)
.+.++..+...+.. +-.+|.||||||||+++..+...+
T Consensus 150 ~~~Q~~A~~~al~~-----------------~~~vI~G~pGTGKTt~i~~~l~~l 187 (359)
T d1w36d1 150 INWQKVAAAVALTR-----------------RISVISGGPGTGKTTTVAKLLAAL 187 (359)
T ss_dssp CCHHHHHHHHHHTB-----------------SEEEEECCTTSTHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHCC-----------------CEEEEECCCCCCCEEHHHHHHHHH
T ss_conf 63899999999708-----------------859997689887521699999999
No 82
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=96.52 E-value=0.00072 Score=42.71 Aligned_cols=36 Identities=31% Similarity=0.530 Sum_probs=32.1
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCC
Q ss_conf 249999589983999999999991995699611100
Q 000823 971 KGILLFGPPGTGKTMLAKAVATEAGANFINISMSSI 1006 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkAIA~elg~~vi~Id~seL 1006 (1267)
+-|+|.||||+|||++|+++++.++.+++.++...+
T Consensus 5 ~iI~l~G~~GsGKSTia~~La~~lg~~~~~~~~d~~ 40 (176)
T d1zp6a1 5 NILLLSGHPGSGKSTIAEALANLPGVPKVHFHSDDL 40 (176)
T ss_dssp EEEEEEECTTSCHHHHHHHHHTCSSSCEEEECTTHH
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHCCCEEEECHHHH
T ss_conf 599998899998899999999995999799068999
No 83
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId: 562]}
Probab=96.44 E-value=0.0018 Score=39.65 Aligned_cols=35 Identities=29% Similarity=0.433 Sum_probs=29.7
Q ss_pred CCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEC
Q ss_conf 98249999589983999999999991995699611
Q 000823 969 PCKGILLFGPPGTGKTMLAKAVATEAGANFINISM 1003 (1267)
Q Consensus 969 P~~gILL~GPpGTGKT~LAkAIA~elg~~vi~Id~ 1003 (1267)
..+=++|.||||+|||++|++|+..++++++..+.
T Consensus 5 ~~~iivl~G~~GsGKsT~a~~La~~l~~~~~~~d~ 39 (171)
T d1knqa_ 5 DHHIYVLMGVSGSGKSAVASEVAHQLHAAFLDGDF 39 (171)
T ss_dssp TSEEEEEECSTTSCHHHHHHHHHHHHTCEEEEGGG
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHCCCEECHHH
T ss_conf 87189998999989899999999986978310366
No 84
>d1bifa1 c.37.1.7 (A:37-249) 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=96.40 E-value=0.027 Score=30.92 Aligned_cols=34 Identities=21% Similarity=0.330 Sum_probs=26.4
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHHC---CCEEEEECC
Q ss_conf 2499995899839999999999919---956996111
Q 000823 971 KGILLFGPPGTGKTMLAKAVATEAG---ANFINISMS 1004 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkAIA~elg---~~vi~Id~s 1004 (1267)
.=|++.|.||+|||++|++||+.++ .....++..
T Consensus 3 ~li~l~GlpgsGKSTla~~L~~~l~~~~~~~~~~~~D 39 (213)
T d1bifa1 3 TLIVMVGLPARGKTYISKKLTRYLNFIGVPTREFNVG 39 (213)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEEHH
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEECCC
T ss_conf 8999989999999999999999997469997397453
No 85
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase {Streptomyces venezuelae [TaxId: 54571]}
Probab=96.37 E-value=0.0022 Score=39.11 Aligned_cols=33 Identities=15% Similarity=0.343 Sum_probs=29.9
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEC
Q ss_conf 249999589983999999999991995699611
Q 000823 971 KGILLFGPPGTGKTMLAKAVATEAGANFINISM 1003 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkAIA~elg~~vi~Id~ 1003 (1267)
+-|+|.|+||+|||++|++|+..++..++.++.
T Consensus 4 kiI~l~G~~GsGKsTva~~L~~~l~~~~~~~~~ 36 (178)
T d1qhxa_ 4 RMIILNGGSSAGKSGIVRCLQSVLPEPWLAFGV 36 (178)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHSSSCEEEEEH
T ss_pred EEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEC
T ss_conf 599998999999899999999972899699614
No 86
>d1j8yf2 c.37.1.10 (F:87-297) GTPase domain of the signal sequence recognition protein Ffh {Archaeon Acidianus ambivalens [TaxId: 2283]}
Probab=96.26 E-value=0.018 Score=32.35 Aligned_cols=72 Identities=21% Similarity=0.058 Sum_probs=42.2
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHHHHH---CCCEEEEECCCCC--------------------HHCCCCCHHHHHHHHHH
Q ss_conf 898249999589983999999999991---9956996111000--------------------10027518999999999
Q 000823 968 KPCKGILLFGPPGTGKTMLAKAVATEA---GANFINISMSSIT--------------------SKWFGEGEKYVKAVFSL 1024 (1267)
Q Consensus 968 kP~~gILL~GPpGTGKT~LAkAIA~el---g~~vi~Id~seL~--------------------s~~~Ge~ek~I~~iF~~ 1024 (1267)
+.+.-++|.||+|+|||+.+.-+|..+ +..+.-+.+-.+. .....+....+.+....
T Consensus 10 k~p~vi~lvGptGvGKTTTiAKLA~~~~~~g~kV~lit~Dt~R~ga~eQL~~~a~~l~v~~~~~~~~~~~~~~~~~a~~~ 89 (211)
T d1j8yf2 10 KIPYVIMLVGVQGTGKATTAGKLAYFYKKKGFKVGLVGADVYRPAALEQLQQLGQQIGVPVYGEPGEKDVVGIAKRGVEK 89 (211)
T ss_dssp SSSEEEEEECSCCC----HHHHHHHHHHHTTCCEEEEECCCSSHHHHHHHHHHHHHHTCCEECCTTCCCHHHHHHHHHHH
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHH
T ss_conf 99989999899999989999999999997799369997202355156789874014684223024410244789999987
Q ss_pred HHHCCCEEEEECCCH
Q ss_conf 871299179993521
Q 000823 1025 ASKIAPSVIFVDEVD 1039 (1267)
Q Consensus 1025 A~k~~PsIIiIDEID 1039 (1267)
++.....+|+||-.-
T Consensus 90 ~~~~~~d~IlIDTaG 104 (211)
T d1j8yf2 90 FLSEKMEIIIVDTAG 104 (211)
T ss_dssp HHHTTCSEEEEECCC
T ss_pred HHCCCCCEEEEECCC
T ss_conf 402677369985377
No 87
>d1ls1a2 c.37.1.10 (A:89-295) GTPase domain of the signal sequence recognition protein Ffh {Thermus aquaticus [TaxId: 271]}
Probab=96.21 E-value=0.034 Score=30.20 Aligned_cols=34 Identities=26% Similarity=0.288 Sum_probs=25.4
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHH---CCCEEEEECC
Q ss_conf 249999589983999999999991---9956996111
Q 000823 971 KGILLFGPPGTGKTMLAKAVATEA---GANFINISMS 1004 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkAIA~el---g~~vi~Id~s 1004 (1267)
+-++|.||+|+|||+.+.-||..+ +..+.-+++-
T Consensus 11 ~vi~lvGp~GvGKTTTiaKLA~~~~~~g~kV~lit~D 47 (207)
T d1ls1a2 11 NLWFLVGLQGSGKTTTAAKLALYYKGKGRRPLLVAAD 47 (207)
T ss_dssp EEEEEECCTTTTHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECC
T ss_conf 6899989999988999999999999779927999544
No 88
>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum [TaxId: 44689]}
Probab=96.15 E-value=0.0036 Score=37.45 Aligned_cols=38 Identities=21% Similarity=0.485 Sum_probs=29.9
Q ss_pred CCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCCC
Q ss_conf 88982499995899839999999999919956996111000
Q 000823 967 TKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSIT 1007 (1267)
Q Consensus 967 ~kP~~gILL~GPpGTGKT~LAkAIA~elg~~vi~Id~seL~ 1007 (1267)
.+| .-|+|.||||+|||++|+.||..+++.++. ..+++
T Consensus 4 ~kp-~iI~i~G~pGSGKsT~a~~La~~~g~~~i~--~g~~~ 41 (194)
T d1qf9a_ 4 SKP-NVVFVLGGPGSGKGTQCANIVRDFGWVHLS--AGDLL 41 (194)
T ss_dssp CCC-EEEEEEESTTSSHHHHHHHHHHHHCCEEEE--HHHHH
T ss_pred CCC-CEEEEECCCCCCHHHHHHHHHHHHCCCEEC--HHHHH
T ss_conf 899-489998999998899999999997992672--12688
No 89
>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.13 E-value=0.0034 Score=37.70 Aligned_cols=24 Identities=38% Similarity=0.690 Sum_probs=22.4
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 249999589983999999999991
Q 000823 971 KGILLFGPPGTGKTMLAKAVATEA 994 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkAIA~el 994 (1267)
++|+|+||||+|||+|+++++..+
T Consensus 2 k~v~ItG~~GtGKTtl~~~i~~~l 25 (189)
T d2i3ba1 2 RHVFLTGPPGVGKTTLIHKASEVL 25 (189)
T ss_dssp CCEEEESCCSSCHHHHHHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHHHHH
T ss_conf 699998899971999999999999
No 90
>d1ak2a1 c.37.1.1 (A:14-146,A:177-233) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-2 [TaxId: 9913]}
Probab=96.12 E-value=0.0039 Score=37.22 Aligned_cols=31 Identities=29% Similarity=0.455 Sum_probs=26.8
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHHCCCEEEE
Q ss_conf 2499995899839999999999919956996
Q 000823 971 KGILLFGPPGTGKTMLAKAVATEAGANFINI 1001 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkAIA~elg~~vi~I 1001 (1267)
..++|.||||+|||++|+.||..+++.++.+
T Consensus 4 ~riil~G~pGSGKsT~a~~La~~~g~~~i~~ 34 (190)
T d1ak2a1 4 VRAVLLGPPGAGKGTQAPKLAKNFCVCHLAT 34 (190)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHHTCEEEEH
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHCCEEEEH
T ss_conf 3899989999988999999999869857757
No 91
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus halodurans [TaxId: 86665]}
Probab=96.12 E-value=0.0025 Score=38.64 Aligned_cols=29 Identities=28% Similarity=0.439 Sum_probs=25.7
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHHCCCEE
Q ss_conf 24999958998399999999999199569
Q 000823 971 KGILLFGPPGTGKTMLAKAVATEAGANFI 999 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkAIA~elg~~vi 999 (1267)
+-|+|.||||+|||++|+.|+..++..++
T Consensus 3 klI~i~G~~GsGKTTva~~L~~~~~~~~~ 31 (176)
T d2bdta1 3 KLYIITGPAGVGKSTTCKRLAAQLDNSAY 31 (176)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHSSSEEE
T ss_pred EEEEEECCCCCCHHHHHHHHHHHCCCCEE
T ss_conf 08999899999989999999998099889
No 92
>d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea mays) [TaxId: 4577]}
Probab=96.11 E-value=0.0021 Score=39.20 Aligned_cols=35 Identities=17% Similarity=0.329 Sum_probs=29.1
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCCC
Q ss_conf 2499995899839999999999919956996111000
Q 000823 971 KGILLFGPPGTGKTMLAKAVATEAGANFINISMSSIT 1007 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkAIA~elg~~vi~Id~seL~ 1007 (1267)
..|+|.||||+|||++|+.||..+++.++. ..+++
T Consensus 4 m~I~i~GppGsGKsT~a~~La~~~~~~~is--~~~~~ 38 (189)
T d1zaka1 4 LKVMISGAPASGKGTQCELIKTKYQLAHIS--AGDLL 38 (189)
T ss_dssp CCEEEEESTTSSHHHHHHHHHHHHCCEECC--HHHHH
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHCCCEEE--HHHHH
T ss_conf 299998899999899999999987991785--00788
No 93
>d1zina1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=96.11 E-value=0.0037 Score=37.37 Aligned_cols=31 Identities=29% Similarity=0.544 Sum_probs=27.6
Q ss_pred EEEEECCCCCHHHHHHHHHHHHHCCCEEEEE
Q ss_conf 4999958998399999999999199569961
Q 000823 972 GILLFGPPGTGKTMLAKAVATEAGANFINIS 1002 (1267)
Q Consensus 972 gILL~GPpGTGKT~LAkAIA~elg~~vi~Id 1002 (1267)
.|+|.||||+|||++|+.||..+++.++...
T Consensus 2 ~I~i~G~pGSGKsT~a~~La~~~~~~~i~~~ 32 (182)
T d1zina1 2 NLVLMGLPGAGKGTQAEKIVAAYGIPHISTG 32 (182)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHCCCEEEHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHCCCEECHH
T ss_conf 8999889999989999999998799266153
No 94
>d2ak3a1 c.37.1.1 (A:0-124,A:162-225) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]}
Probab=96.11 E-value=0.004 Score=37.13 Aligned_cols=35 Identities=17% Similarity=0.373 Sum_probs=28.8
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCCC
Q ss_conf 2499995899839999999999919956996111000
Q 000823 971 KGILLFGPPGTGKTMLAKAVATEAGANFINISMSSIT 1007 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkAIA~elg~~vi~Id~seL~ 1007 (1267)
..++|.||||+|||++|+.||..+++.++ +..+++
T Consensus 7 mrIiliG~PGSGKtT~a~~La~~~g~~~i--s~gdll 41 (189)
T d2ak3a1 7 LRAAIMGAPGSGKGTVSSRITKHFELKHL--SSGDLL 41 (189)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHBCCEEE--EHHHHH
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHCCEEE--CHHHHH
T ss_conf 16999889999879999999999798687--189999
No 95
>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major [TaxId: 5664]}
Probab=96.04 E-value=0.0039 Score=37.23 Aligned_cols=30 Identities=40% Similarity=0.638 Sum_probs=25.4
Q ss_pred CCEEEEECCCCCHHHHHHHHHHHHHCC-CEE
Q ss_conf 824999958998399999999999199-569
Q 000823 970 CKGILLFGPPGTGKTMLAKAVATEAGA-NFI 999 (1267)
Q Consensus 970 ~~gILL~GPpGTGKT~LAkAIA~elg~-~vi 999 (1267)
+..|+|.||||+|||++|+.||..++. .++
T Consensus 5 ~~~I~i~G~~GsGKTT~~~~La~~l~~~~~~ 35 (174)
T d1y63a_ 5 GINILITGTPGTGKTSMAEMIAAELDGFQHL 35 (174)
T ss_dssp SCEEEEECSTTSSHHHHHHHHHHHSTTEEEE
T ss_pred CCEEEEEECCCCCHHHHHHHHHHHHCCCCEE
T ss_conf 8889998289998899999999985899087
No 96
>d2cdna1 c.37.1.1 (A:1-181) Adenylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=96.00 E-value=0.0032 Score=37.83 Aligned_cols=30 Identities=40% Similarity=0.651 Sum_probs=27.3
Q ss_pred EEEEECCCCCHHHHHHHHHHHHHCCCEEEE
Q ss_conf 499995899839999999999919956996
Q 000823 972 GILLFGPPGTGKTMLAKAVATEAGANFINI 1001 (1267)
Q Consensus 972 gILL~GPpGTGKT~LAkAIA~elg~~vi~I 1001 (1267)
.++|.||||+|||++|+.||..+++.++.+
T Consensus 2 ~I~i~G~pGsGKsT~a~~La~~~g~~~i~~ 31 (181)
T d2cdna1 2 RVLLLGPPGAGKGTQAVKLAEKLGIPQIST 31 (181)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHTCCEEEH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHCCCEECH
T ss_conf 899988999997999999999989916725
No 97
>d1g6oa_ c.37.1.11 (A:) Hexameric traffic ATPase, HP0525 {Helicobacter pylori [TaxId: 210]}
Probab=95.97 E-value=0.0047 Score=36.60 Aligned_cols=69 Identities=22% Similarity=0.350 Sum_probs=47.5
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHH--CCCEEEE-ECCCCCH-------HCCCCCHHHHHHHHHHHHHCCCEEEEECCCH
Q ss_conf 249999589983999999999991--9956996-1110001-------0027518999999999871299179993521
Q 000823 971 KGILLFGPPGTGKTMLAKAVATEA--GANFINI-SMSSITS-------KWFGEGEKYVKAVFSLASKIAPSVIFVDEVD 1039 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkAIA~el--g~~vi~I-d~seL~s-------~~~Ge~ek~I~~iF~~A~k~~PsIIiIDEID 1039 (1267)
+++|+.|++|+|||++.++++... +..++.+ +..++.- ...+..+-....++..+.+..|..|++.|+-
T Consensus 167 ~nili~G~tgSGKTT~l~al~~~i~~~~rivtiEd~~El~l~~~~~~~~~~~~~~~~~~~ll~~~lR~~pd~iivgEiR 245 (323)
T d1g6oa_ 167 KNVIVCGGTGSGKTTYIKSIMEFIPKEERIISIEDTEEIVFKHHKNYTQLFFGGNITSADCLKSCLRMRPDRIILGELR 245 (323)
T ss_dssp CCEEEEESTTSSHHHHHHHHGGGSCTTCCEEEEESSCCCCCSSCSSEEEEECBTTBCHHHHHHHHTTSCCSEEEESCCC
T ss_pred CCEEEEEECCCCCHHHHHHHHHHCCCCCCEEECCCHHHHHCCCCCCCCEECCCCCHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf 8889994035662578999865301456233113226551111245410014654249999999743499854578667
No 98
>d1ukza_ c.37.1.1 (A:) Uridylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=95.94 E-value=0.005 Score=36.40 Aligned_cols=31 Identities=19% Similarity=0.382 Sum_probs=27.1
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHHCCCEEEE
Q ss_conf 2499995899839999999999919956996
Q 000823 971 KGILLFGPPGTGKTMLAKAVATEAGANFINI 1001 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkAIA~elg~~vi~I 1001 (1267)
.-|+|.||||+|||++|+.||..+++.++..
T Consensus 9 ~iI~i~GppGSGKsT~a~~La~~~g~~~is~ 39 (196)
T d1ukza_ 9 SVIFVLGGPGAGKGTQCEKLVKDYSFVHLSA 39 (196)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHSSCEEEEH
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHCCEEEEH
T ss_conf 2899989999998999999999859908853
No 99
>d3adka_ c.37.1.1 (A:) Adenylate kinase {Pig (Sus scrofa) [TaxId: 9823]}
Probab=95.87 E-value=0.005 Score=36.43 Aligned_cols=36 Identities=25% Similarity=0.452 Sum_probs=29.3
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCCCH
Q ss_conf 24999958998399999999999199569961110001
Q 000823 971 KGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITS 1008 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkAIA~elg~~vi~Id~seL~s 1008 (1267)
.-|+|.||||+||+++|+.||..+++.++ ++.+++.
T Consensus 9 ~iI~l~G~pGSGKsT~a~~La~~~g~~~i--s~g~llr 44 (194)
T d3adka_ 9 KIIFVVGGPGSGKGTQCEKIVQKYGYTHL--STGDLLR 44 (194)
T ss_dssp CEEEEEECTTSSHHHHHHHHHHHTCCEEE--EHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHCCEEE--ECCHHHH
T ss_conf 28999899999879999999998698468--3347899
No 100
>d1ckea_ c.37.1.1 (A:) CMP kinase {Escherichia coli [TaxId: 562]}
Probab=95.87 E-value=0.0045 Score=36.75 Aligned_cols=33 Identities=33% Similarity=0.470 Sum_probs=27.8
Q ss_pred EEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCC
Q ss_conf 49999589983999999999991995699611100
Q 000823 972 GILLFGPPGTGKTMLAKAVATEAGANFINISMSSI 1006 (1267)
Q Consensus 972 gILL~GPpGTGKT~LAkAIA~elg~~vi~Id~seL 1006 (1267)
-|.+.||||+||+++|+.||+.++++++ +..++
T Consensus 5 iI~I~GppGSGKgT~ak~La~~~gl~~i--StGdL 37 (225)
T d1ckea_ 5 VITIDGPSGAGKGTLCKAMAEALQWHLL--DSGAI 37 (225)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHTCEEE--EHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHCCCEE--CHHHH
T ss_conf 8997799988989999999999699089--88899
No 101
>d1teva_ c.37.1.1 (A:) UMP/CMP kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.83 E-value=0.0056 Score=36.07 Aligned_cols=35 Identities=20% Similarity=0.407 Sum_probs=28.5
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCCC
Q ss_conf 2499995899839999999999919956996111000
Q 000823 971 KGILLFGPPGTGKTMLAKAVATEAGANFINISMSSIT 1007 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkAIA~elg~~vi~Id~seL~ 1007 (1267)
.-|+|.||||+|||++|+.||..+++..+ +..+++
T Consensus 2 ~iI~i~GppGSGKsT~a~~La~~~g~~~i--~~g~ll 36 (194)
T d1teva_ 2 LVVFVLGGPGAGKGTQCARIVEKYGYTHL--SAGELL 36 (194)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHHHCCEEE--EHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHCCCEE--CHHHHH
T ss_conf 39999799999989999999998699267--688999
No 102
>d1s3ga1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus globisporus [TaxId: 1459]}
Probab=95.82 E-value=0.006 Score=35.83 Aligned_cols=30 Identities=33% Similarity=0.582 Sum_probs=27.1
Q ss_pred EEEEECCCCCHHHHHHHHHHHHHCCCEEEE
Q ss_conf 499995899839999999999919956996
Q 000823 972 GILLFGPPGTGKTMLAKAVATEAGANFINI 1001 (1267)
Q Consensus 972 gILL~GPpGTGKT~LAkAIA~elg~~vi~I 1001 (1267)
.|+|.||||+|||++|+.||..+++.++..
T Consensus 2 ~I~i~G~pGSGKsT~a~~La~~~g~~~is~ 31 (182)
T d1s3ga1 2 NIVLMGLPGAGKGTQADRIVEKYGTPHIST 31 (182)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHCCCEEEH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHCCCEEEH
T ss_conf 899988999987999999999879936638
No 103
>d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3' phosphatase, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=95.80 E-value=0.01 Score=34.02 Aligned_cols=62 Identities=16% Similarity=0.242 Sum_probs=37.8
Q ss_pred CCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCCCHHCCCCCHHHHHHHHHHHHHCCCEEEEECCCH
Q ss_conf 98249999589983999999999991995699611100010027518999999999871299179993521
Q 000823 969 PCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVD 1039 (1267)
Q Consensus 969 P~~gILL~GPpGTGKT~LAkAIA~elg~~vi~Id~seL~s~~~Ge~ek~I~~iF~~A~k~~PsIIiIDEID 1039 (1267)
.+.-|++.|+||+|||++|+.++...++.++..| ++. .. ..+......+-+.. ..++||...
T Consensus 13 ~p~liil~G~pGsGKST~a~~l~~~~~~~~i~~D--~~~-----~~-~~~~~~~~~~l~~g-~~vIiD~t~ 74 (172)
T d1yj5a2 13 NPEVVVAVGFPGAGKSTFIQEHLVSAGYVHVNRD--TLG-----SW-QRCVSSCQAALRQG-KRVVIDNTN 74 (172)
T ss_dssp SCCEEEEECCTTSSHHHHHHHHTGGGTCEEEEHH--HHC-----SH-HHHHHHHHHHHHTT-CCEEEESCC
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHCCCEEECHH--HHH-----HH-HHHHHHHHHHHHCC-CCCEEECCC
T ss_conf 9989999899999899999999976597897607--777-----88-89999999999779-995551767
No 104
>d1mo6a1 c.37.1.11 (A:1-269) RecA protein, ATPase-domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=95.79 E-value=0.033 Score=30.34 Aligned_cols=75 Identities=21% Similarity=0.263 Sum_probs=42.4
Q ss_pred CCCEEEEECCCCCHHHHHHHHHHHHH---CCCEEEEECCCCCHH----------------CCCCCHHHHHHHHHHHHHCC
Q ss_conf 98249999589983999999999991---995699611100010----------------02751899999999987129
Q 000823 969 PCKGILLFGPPGTGKTMLAKAVATEA---GANFINISMSSITSK----------------WFGEGEKYVKAVFSLASKIA 1029 (1267)
Q Consensus 969 P~~gILL~GPpGTGKT~LAkAIA~el---g~~vi~Id~seL~s~----------------~~Ge~ek~I~~iF~~A~k~~ 1029 (1267)
..+-..|+||+|+|||++|..++... +..++.+|...-++. .....|..+..+-.......
T Consensus 59 ~g~i~e~~G~~~~GKT~l~l~~~~~~q~~g~~~vyIDtE~~~~~e~a~~~GvD~d~il~~~~~~~E~~~~~~~~l~~~~~ 138 (269)
T d1mo6a1 59 RGRVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQPDTGEQALEIADMLIRSGA 138 (269)
T ss_dssp SSSEEEEECSSSSSHHHHHHHHHHHHHHTTCEEEEEESSCCCCHHHHHHHTCCGGGCEEECCSSHHHHHHHHHHHHHTTC
T ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHCCCHHHEEEECCCCHHHHHHHHHHHHHCCC
T ss_conf 63369996488748899999999987548988999989766799999980998899589669989999999999985599
Q ss_pred CEEEEECCCHHHHC
Q ss_conf 91799935212213
Q 000823 1030 PSVIFVDEVDSMLG 1043 (1267)
Q Consensus 1030 PsIIiIDEID~L~~ 1043 (1267)
+.+|+||-+-.+++
T Consensus 139 ~~liIiDSi~al~~ 152 (269)
T d1mo6a1 139 LDIVVIDSVAALVP 152 (269)
T ss_dssp EEEEEEECSTTCCC
T ss_pred CCEEEEECCCCCCC
T ss_conf 87899933024560
No 105
>d1akya1 c.37.1.1 (A:3-130,A:169-220) Adenylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=95.77 E-value=0.0062 Score=35.73 Aligned_cols=32 Identities=28% Similarity=0.477 Sum_probs=27.3
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHHCCCEEEEE
Q ss_conf 24999958998399999999999199569961
Q 000823 971 KGILLFGPPGTGKTMLAKAVATEAGANFINIS 1002 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkAIA~elg~~vi~Id 1002 (1267)
..|+|.||||+|||++|+.||..+++.++...
T Consensus 3 mrIvl~G~pGSGKtT~a~~La~~~g~~~i~~~ 34 (180)
T d1akya1 3 IRMVLIGPPGAGKGTQAPNLQERFHAAHLATG 34 (180)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHHCCEEEEHH
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHCCCEEECC
T ss_conf 69999899999989999999999699458344
No 106
>d1q3ta_ c.37.1.1 (A:) CMP kinase {Streptococcus pneumoniae [TaxId: 1313]}
Probab=95.68 E-value=0.0061 Score=35.77 Aligned_cols=29 Identities=31% Similarity=0.629 Sum_probs=25.4
Q ss_pred EEEEECCCCCHHHHHHHHHHHHHCCCEEE
Q ss_conf 49999589983999999999991995699
Q 000823 972 GILLFGPPGTGKTMLAKAVATEAGANFIN 1000 (1267)
Q Consensus 972 gILL~GPpGTGKT~LAkAIA~elg~~vi~ 1000 (1267)
-|.+.||||+|||++|+.||..++++++.
T Consensus 5 ~IaIdGp~GsGKgT~ak~La~~lg~~~is 33 (223)
T d1q3ta_ 5 QIAIDGPASSGKSTVAKIIAKDFGFTYLD 33 (223)
T ss_dssp EEEEECSSCSSHHHHHHHHHHHHCCEEEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHHCCCEEC
T ss_conf 99978999879899999999996994787
No 107
>d1vmaa2 c.37.1.10 (A:82-294) GTPase domain of the signal recognition particle receptor FtsY {Thermotoga maritima [TaxId: 2336]}
Probab=95.58 E-value=0.061 Score=28.33 Aligned_cols=35 Identities=29% Similarity=0.336 Sum_probs=25.1
Q ss_pred CCCEEEEECCCCCHHHHHHHHHHHHH---CCCEEEEEC
Q ss_conf 98249999589983999999999991---995699611
Q 000823 969 PCKGILLFGPPGTGKTMLAKAVATEA---GANFINISM 1003 (1267)
Q Consensus 969 P~~gILL~GPpGTGKT~LAkAIA~el---g~~vi~Id~ 1003 (1267)
++.-++|.||+|+|||+.+.-+|..+ +..+.-+.+
T Consensus 10 ~p~vi~lvGptGvGKTTTiAKLAa~~~~~~~kV~lit~ 47 (213)
T d1vmaa2 10 PPFVIMVVGVNGTGKTTSCGKLAKMFVDEGKSVVLAAA 47 (213)
T ss_dssp SCEEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEE
T ss_conf 99899998999998899999999999977990699960
No 108
>d1e4va1 c.37.1.1 (A:1-121,A:157-214) Adenylate kinase {Escherichia coli [TaxId: 562]}
Probab=95.57 E-value=0.0079 Score=34.95 Aligned_cols=30 Identities=30% Similarity=0.441 Sum_probs=26.7
Q ss_pred EEEEECCCCCHHHHHHHHHHHHHCCCEEEE
Q ss_conf 499995899839999999999919956996
Q 000823 972 GILLFGPPGTGKTMLAKAVATEAGANFINI 1001 (1267)
Q Consensus 972 gILL~GPpGTGKT~LAkAIA~elg~~vi~I 1001 (1267)
.++|.||||+|||++|+.||..+++.++..
T Consensus 2 ~I~i~G~pGSGKsT~~~~La~~~~~~~i~~ 31 (179)
T d1e4va1 2 RIILLGAPVAGKGTQAQFIMEKYGIPQIST 31 (179)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHCCCEEEH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHCCCEECH
T ss_conf 899987999998999999999869955510
No 109
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=95.50 E-value=0.007 Score=35.32 Aligned_cols=26 Identities=27% Similarity=0.338 Sum_probs=23.2
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHHCC
Q ss_conf 24999958998399999999999199
Q 000823 971 KGILLFGPPGTGKTMLAKAVATEAGA 996 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkAIA~elg~ 996 (1267)
.-|+|.|+||+|||++|++||..++.
T Consensus 7 ~~I~l~G~~GsGKTTia~~La~~L~~ 32 (183)
T d1m8pa3 7 FTIFLTGYMNSGKDAIARALQVTLNQ 32 (183)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHHHH
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHHH
T ss_conf 69998899999999999999999865
No 110
>d1tf7a1 c.37.1.11 (A:14-255) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=95.47 E-value=0.066 Score=28.07 Aligned_cols=77 Identities=16% Similarity=0.226 Sum_probs=45.8
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHHHHH----CCCEEEEECCCCCHH----------------------------------
Q ss_conf 898249999589983999999999991----995699611100010----------------------------------
Q 000823 968 KPCKGILLFGPPGTGKTMLAKAVATEA----GANFINISMSSITSK---------------------------------- 1009 (1267)
Q Consensus 968 kP~~gILL~GPpGTGKT~LAkAIA~el----g~~vi~Id~seL~s~---------------------------------- 1009 (1267)
.+..-++|+|+||+|||+++..+|... +..+..++..+-...
T Consensus 24 ~~G~~~~I~G~~G~GKT~la~~~~~~~~~~~~~~~~~~s~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (242)
T d1tf7a1 24 PIGRSTLVSGTSGTGKTLFSIQFLYNGIIEFDEPGVFVTFEETPQDIIKNARSFGWDLAKLVDEGKLFILDASPDPEGQE 103 (242)
T ss_dssp ETTSEEEEEESTTSSHHHHHHHHHHHHHHHHCCCEEEEESSSCHHHHHHHHGGGTCCHHHHHHTTSEEEEECCCCSSCCS
T ss_pred CCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHCCHHHHHHCCCHHHHH
T ss_conf 69839999947999999999999999998568874201266799999999998499848988714302444210335444
Q ss_pred CCC--CCHHHHHHHHHHHHHCCCEEEEECCCHHHHCC
Q ss_conf 027--51899999999987129917999352122138
Q 000823 1010 WFG--EGEKYVKAVFSLASKIAPSVIFVDEVDSMLGR 1044 (1267)
Q Consensus 1010 ~~G--e~ek~I~~iF~~A~k~~PsIIiIDEID~L~~~ 1044 (1267)
... .....+..+.....+..+.+++||.+..++..
T Consensus 104 ~~~~~~~~~l~~~l~~~i~~~~~~~viiD~~~~l~~~ 140 (242)
T d1tf7a1 104 VVGGFDLSALIERINYAIQKYRARRVSIDSVTSVFQQ 140 (242)
T ss_dssp CCSSHHHHHHHHHHHHHHHHHTCSEEEEECSTTTSTT
T ss_pred HHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
T ss_conf 4302458999999999988631222002078899876
No 111
>d1iqpa2 c.37.1.20 (A:2-232) Replication factor C {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=95.38 E-value=0.017 Score=32.42 Aligned_cols=76 Identities=13% Similarity=0.170 Sum_probs=56.8
Q ss_pred CCCEEEEECCHHHHHCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCC
Q ss_conf 79849997250434138942256789987219994899941035788334589998620134773111101357884344
Q 000823 690 SCPFILFMKDAEKSIAGNSDSYSTFKSRLEKLPDKVIVIGSHTHTDNRKEKSHPGGLLFTKFGSNQTALLDLAFPDSFGR 769 (1267)
Q Consensus 690 ~~p~Ilfi~di~~~l~g~~~~~~~lk~~L~~l~g~vvvIGs~~~~d~~~~~~~~~~~~l~~~g~~~~~l~d~a~~~~~~r 769 (1267)
..+.|++|||++.+.. +..+.|...++.-..++++|..++..+.
T Consensus 108 ~~~~iilide~d~~~~---~~~~~ll~~l~~~~~~~~~i~~~n~~~~--------------------------------- 151 (231)
T d1iqpa2 108 ASFKIIFLDEADALTQ---DAQQALRRTMEMFSSNVRFILSCNYSSK--------------------------------- 151 (231)
T ss_dssp CSCEEEEEETGGGSCH---HHHHHHHHHHHHTTTTEEEEEEESCGGG---------------------------------
T ss_pred CCCEEEEEHHHHHCCH---HHHHHHHHHCCCCCCCEEEEECCCCHHH---------------------------------
T ss_conf 8722886143443121---4789876411247764478861487665---------------------------------
Q ss_pred CCCCCCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHH
Q ss_conf 3335787036788984208973997079878899999985465
Q 000823 770 LHDRGKEIPKATKLLTKLFPNKVTIHMPQDEALLASWKHQLDR 812 (1267)
Q Consensus 770 ~~~~~~~~~~~d~~l~rlFp~~IeI~LPdeE~RL~Ilk~qLek 812 (1267)
++++|..|| ..+.+..|+.+....+++..+.+
T Consensus 152 ----------i~~~l~sR~-~~i~~~~~~~~~~~~~l~~~~~~ 183 (231)
T d1iqpa2 152 ----------IIEPIQSRC-AIFRFRPLRDEDIAKRLRYIAEN 183 (231)
T ss_dssp ----------SCHHHHHTE-EEEECCCCCHHHHHHHHHHHHHT
T ss_pred ----------CHHHHHCCC-CCCCCCCCCHHHHHHHHHHHHHH
T ss_conf ----------657684731-21012334304677899888998
No 112
>d1sxjc2 c.37.1.20 (C:12-238) Replication factor C3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=95.24 E-value=0.033 Score=30.27 Aligned_cols=75 Identities=9% Similarity=0.080 Sum_probs=55.4
Q ss_pred CCCEEEEECCHHHHHCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCC
Q ss_conf 79849997250434138942256789987219994899941035788334589998620134773111101357884344
Q 000823 690 SCPFILFMKDAEKSIAGNSDSYSTFKSRLEKLPDKVIVIGSHTHTDNRKEKSHPGGLLFTKFGSNQTALLDLAFPDSFGR 769 (1267)
Q Consensus 690 ~~p~Ilfi~di~~~l~g~~~~~~~lk~~L~~l~g~vvvIGs~~~~d~~~~~~~~~~~~l~~~g~~~~~l~d~a~~~~~~r 769 (1267)
.+..|++|||++.+ +.+..+.|...|+..+.+.++|..++....
T Consensus 98 ~~~kiiiiDe~d~~---~~~~~~~Ll~~le~~~~~~~~~~~~~~~~~--------------------------------- 141 (227)
T d1sxjc2 98 KGFKLIILDEADAM---TNAAQNALRRVIERYTKNTRFCVLANYAHK--------------------------------- 141 (227)
T ss_dssp CSCEEEEETTGGGS---CHHHHHHHHHHHHHTTTTEEEEEEESCGGG---------------------------------
T ss_pred CCEEEEEEECCCCC---HHHHHHHHHHHHHHCCCCEEECCCCCCHHH---------------------------------
T ss_conf 77189999663200---023789999886311200232012670877---------------------------------
Q ss_pred CCCCCCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHH
Q ss_conf 333578703678898420897399707987889999998546
Q 000823 770 LHDRGKEIPKATKLLTKLFPNKVTIHMPQDEALLASWKHQLD 811 (1267)
Q Consensus 770 ~~~~~~~~~~~d~~l~rlFp~~IeI~LPdeE~RL~Ilk~qLe 811 (1267)
+.+.|-.|+ ..+.+..|..+.....++..+.
T Consensus 142 ----------i~~~i~sr~-~~i~~~~~~~~~i~~~l~~I~~ 172 (227)
T d1sxjc2 142 ----------LTPALLSQC-TRFRFQPLPQEAIERRIANVLV 172 (227)
T ss_dssp ----------SCHHHHTTS-EEEECCCCCHHHHHHHHHHHHH
T ss_pred ----------HHHHHHHHH-HHHCCCCCCCCCCCCCCCCCCC
T ss_conf ----------599999887-5401235652000110212211
No 113
>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS kinase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.14 E-value=0.0022 Score=39.13 Aligned_cols=29 Identities=28% Similarity=0.264 Sum_probs=24.3
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHHCCCEE
Q ss_conf 24999958998399999999999199569
Q 000823 971 KGILLFGPPGTGKTMLAKAVATEAGANFI 999 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkAIA~elg~~vi 999 (1267)
.-|+|.|+||+|||++|+.||..++..++
T Consensus 20 ~vI~L~G~pGSGKTTiAk~La~~l~~~~~ 48 (195)
T d1x6va3 20 CTVWLTGLSGAGKTTVSMALEEYLVCHGI 48 (195)
T ss_dssp EEEEEESSCHHHHHHHHHHHHHHHHHTTC
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHCCC
T ss_conf 69998899999999999999999974479
No 114
>d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal domain {Aeropyrum pernix [TaxId: 56636]}
Probab=95.13 E-value=0.04 Score=29.69 Aligned_cols=101 Identities=6% Similarity=0.114 Sum_probs=62.8
Q ss_pred HHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHCCC---CCHHHHHHHHHHC-----CCCCEEEEEECCCCCCCCCCCCCC
Q ss_conf 79999999999863014798499972504341389---4225678998721-----999489994103578833458999
Q 000823 673 DKLLINTLFEVVFSESRSCPFILFMKDAEKSIAGN---SDSYSTFKSRLEK-----LPDKVIVIGSHTHTDNRKEKSHPG 744 (1267)
Q Consensus 673 ~k~~i~~L~ev~~~~~~~~p~Ilfi~di~~~l~g~---~~~~~~lk~~L~~-----l~g~vvvIGs~~~~d~~~~~~~~~ 744 (1267)
.....+.+.+...+ ...+.++++++++.+.... .+....+...++. ..+.+.+|+..+..+.
T Consensus 116 ~~~~~~~l~~~~~~--~~~~~~~iide~d~l~~~~~~~~~~~~~l~~l~~~l~~~~~~~~~~~i~i~~~~~~-------- 185 (287)
T d1w5sa2 116 ALDILKALVDNLYV--ENHYLLVILDEFQSMLSSPRIAAEDLYTLLRVHEEIPSRDGVNRIGFLLVASDVRA-------- 185 (287)
T ss_dssp HHHHHHHHHHHHHH--HTCEEEEEEESTHHHHSCTTSCHHHHHHHHTHHHHSCCTTSCCBEEEEEEEEETHH--------
T ss_pred HHHHHHHHHHHHHH--CCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCHHHCCCCEEEEEECCCHHH--------
T ss_conf 78899999999985--46766541257888515665542678988999874320104565147762430899--------
Q ss_pred CCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHH
Q ss_conf 86201347731111013578843443335787036788984208973997079878899999985465
Q 000823 745 GLLFTKFGSNQTALLDLAFPDSFGRLHDRGKEIPKATKLLTKLFPNKVTIHMPQDEALLASWKHQLDR 812 (1267)
Q Consensus 745 ~~~l~~~g~~~~~l~d~a~~~~~~r~~~~~~~~~~~d~~l~rlFp~~IeI~LPdeE~RL~Ilk~qLek 812 (1267)
.+. + ...+..+..||+.++.++.++.++...|++..++.
T Consensus 186 --------------~~~-----~----------~~~~~~~~~r~~~~i~f~~y~~~el~~Il~~r~~~ 224 (287)
T d1w5sa2 186 --------------LSY-----M----------REKIPQVESQIGFKLHLPAYKSRELYTILEQRAEL 224 (287)
T ss_dssp --------------HHH-----H----------HHHCHHHHTTCSEEEECCCCCHHHHHHHHHHHHHH
T ss_pred --------------HHH-----H----------HHHCCCHHCCCCEEEECCCCCHHHHHHHHHHHHHH
T ss_conf --------------999-----9----------86252011232206522577599999987666777
No 115
>d1a1va1 c.37.1.14 (A:190-325) HCV helicase domain {Human hepatitis C virus (HCV), different isolates [TaxId: 11103]}
Probab=95.11 E-value=0.084 Score=27.28 Aligned_cols=33 Identities=21% Similarity=0.322 Sum_probs=25.4
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEC
Q ss_conf 249999589983999999999991995699611
Q 000823 971 KGILLFGPPGTGKTMLAKAVATEAGANFINISM 1003 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkAIA~elg~~vi~Id~ 1003 (1267)
...+|.+|+|+|||.++-.++...+..++.+-.
T Consensus 9 ~~~ll~apTGsGKT~~~~~~~~~~~~~vli~~P 41 (136)
T d1a1va1 9 QVAHLHAPTGSGKSTKVPAAYAAQGYKVLVLNP 41 (136)
T ss_dssp EEEEEECCTTSCTTTHHHHHHHTTTCCEEEEES
T ss_pred CEEEEEECCCCCHHHHHHHHHHHCCCCEEEECC
T ss_conf 889999688779999999999986993999767
No 116
>d1njfa_ c.37.1.20 (A:) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=95.09 E-value=0.026 Score=31.11 Aligned_cols=76 Identities=12% Similarity=0.165 Sum_probs=57.1
Q ss_pred CCCEEEEECCHHHHHCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCC
Q ss_conf 79849997250434138942256789987219994899941035788334589998620134773111101357884344
Q 000823 690 SCPFILFMKDAEKSIAGNSDSYSTFKSRLEKLPDKVIVIGSHTHTDNRKEKSHPGGLLFTKFGSNQTALLDLAFPDSFGR 769 (1267)
Q Consensus 690 ~~p~Ilfi~di~~~l~g~~~~~~~lk~~L~~l~g~vvvIGs~~~~d~~~~~~~~~~~~l~~~g~~~~~l~d~a~~~~~~r 769 (1267)
.+.-|++|||+|.+ +.++.+.|...|+..+.+..+|+.++..+.
T Consensus 114 ~~~kviiIde~d~l---~~~~q~~Llk~lE~~~~~~~~il~tn~~~~--------------------------------- 157 (239)
T d1njfa_ 114 GRFKVYLIDEVHML---SRHSFNALLKTLEEPPEHVKFLLATTDPQK--------------------------------- 157 (239)
T ss_dssp SSSEEEEEETGGGS---CHHHHHHHHHHHHSCCTTEEEEEEESCGGG---------------------------------
T ss_pred CCCEEEEEECCCCC---CHHHHHHHHHHHHCCCCCEEEEEECCCCCC---------------------------------
T ss_conf 99879999781108---999999999998568988699997388563---------------------------------
Q ss_pred CCCCCCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHH
Q ss_conf 3335787036788984208973997079878899999985465
Q 000823 770 LHDRGKEIPKATKLLTKLFPNKVTIHMPQDEALLASWKHQLDR 812 (1267)
Q Consensus 770 ~~~~~~~~~~~d~~l~rlFp~~IeI~LPdeE~RL~Ilk~qLek 812 (1267)
+..+|-.|+ ..+.++.|+.+.....+....+.
T Consensus 158 ----------i~~~i~SRc-~~i~~~~~~~~~i~~~l~~i~~~ 189 (239)
T d1njfa_ 158 ----------LPVTILSRC-LQFHLKALDVEQIRHQLEHILNE 189 (239)
T ss_dssp ----------SCHHHHTTS-EEEECCCCCHHHHHHHHHHHHHH
T ss_pred ----------CCHHHHHHH-CCCCCCCCCHHHHHHHHHHHHHH
T ss_conf ----------676576121-02222467678766688787764
No 117
>d1u0ja_ c.37.1.20 (A:) Rep 40 protein helicase domain {Adeno-associated virus 2, AAV2 [TaxId: 10804]}
Probab=95.05 E-value=0.043 Score=29.44 Aligned_cols=112 Identities=18% Similarity=0.209 Sum_probs=58.8
Q ss_pred CCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCCCHHCCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHCCCCCCC
Q ss_conf 82499995899839999999999919956996111000100275189999999998712991799935212213899984
Q 000823 970 CKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPG 1049 (1267)
Q Consensus 970 ~~gILL~GPpGTGKT~LAkAIA~elg~~vi~Id~seL~s~~~Ge~ek~I~~iF~~A~k~~PsIIiIDEID~L~~~r~~~~ 1049 (1267)
...+.|+||+++|||+++.+|+..+|.. ..++.+. .-|..+.-..-.++++||.+.-. .
T Consensus 104 ~n~~~l~G~~~tGKS~f~~~i~~~lg~~-~~~~~~~--------------~~f~l~~l~~k~~~~~~e~~~~~------~ 162 (267)
T d1u0ja_ 104 RNTIWLFGPATTGKTNIAEAIAHTVPFY-GCVNWTN--------------ENFPFNDCVDKMVIWWEEGKMTA------K 162 (267)
T ss_dssp CCEEEEECSTTSSHHHHHHHHHHHSSCE-EECCTTC--------------SSCTTGGGSSCSEEEECSCCEET------T
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHCCH-HHCCCCC--------------CCCCCCCCCCCEEEEEECCCCCC------C
T ss_conf 1799998589887789999999983620-2002667--------------88622003798799983888530------0
Q ss_pred HHHHHHHHHHHHHHHCCCCCCC---CCCCEEEEEECCCCC----------CCCHHHHHCCCCCCCCC
Q ss_conf 3799999988655421688656---777689999439999----------99599982035443699
Q 000823 1050 EHEAMRKMKNEFMVNWDGLRTK---DTERILVLAATNRPF----------DLDEAVIRRLPRRLMVN 1103 (1267)
Q Consensus 1050 ~~~a~~~il~~LL~~ldgl~~~---~~~~VlVIaTTN~p~----------~Ld~aLlrRFd~~I~v~ 1103 (1267)
..+..+.++..-....+..... -....++|.++|..- +-..++.||+ ..+.|.
T Consensus 163 ~~~~~K~l~gGd~i~v~~K~k~~~~~~~~p~li~s~n~i~~~~~~~~~~~~~~~~l~~R~-~~~~F~ 228 (267)
T d1u0ja_ 163 VVESAKAILGGSKVRVDQKCKSSAQIDPTPVIVTSNTNMCAVIDGNSTTFEHQQPLQDRM-FKFELT 228 (267)
T ss_dssp THHHHHHHHTTCCEEC------CCEECCCCEEEEESSCTTCEEETTEEECTTHHHHHTTE-EEEECC
T ss_pred HHHHHHHHCCCCCEEEECCCCCCCEEECCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHE-EEEECC
T ss_conf 789999864899368532038970740770899948976524577866430025756517-998789
No 118
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain {Bacteriophage T4 [TaxId: 10665]}
Probab=94.83 E-value=0.016 Score=32.74 Aligned_cols=35 Identities=34% Similarity=0.514 Sum_probs=25.5
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCC
Q ss_conf 249999589983999999999991995699611100
Q 000823 971 KGILLFGPPGTGKTMLAKAVATEAGANFINISMSSI 1006 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkAIA~elg~~vi~Id~seL 1006 (1267)
+=|+|.||||+|||++|+.++.... .+..++..++
T Consensus 3 klIii~G~pGsGKTTla~~L~~~~~-~~~~~~~d~~ 37 (152)
T d1ly1a_ 3 KIILTIGCPGSGKSTWAREFIAKNP-GFYNINRDDY 37 (152)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHHST-TEEEECHHHH
T ss_pred EEEEEECCCCCCHHHHHHHHHHHCC-CCEEECHHHH
T ss_conf 7999989999999999999999579-9799603999
No 119
>d1szpa2 c.37.1.11 (A:145-395) DNA repair protein Rad51, catalytic domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=94.48 E-value=0.1 Score=26.61 Aligned_cols=37 Identities=24% Similarity=0.291 Sum_probs=26.7
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHHHHH---------CCCEEEEECC
Q ss_conf 898249999589983999999999991---------9956996111
Q 000823 968 KPCKGILLFGPPGTGKTMLAKAVATEA---------GANFINISMS 1004 (1267)
Q Consensus 968 kP~~gILL~GPpGTGKT~LAkAIA~el---------g~~vi~Id~s 1004 (1267)
.+..-++|+||||+|||+++..+|... +..++.++..
T Consensus 32 ~~G~~~li~G~pGsGKT~l~lq~~~~~~~~~~~~~~~~~~~~i~~~ 77 (251)
T d1szpa2 32 ETGSITELFGEFRTGKSQLCHTLAVTCQIPLDIGGGEGKCLYIDTE 77 (251)
T ss_dssp ESSSEEEEEESTTSSHHHHHHHHTTTTTSCTTTTCCSCEEEEEESS
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEC
T ss_conf 6996999983899988999999999863124312689639999402
No 120
>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta, toxin zeta subunit {Streptococcus pyogenes [TaxId: 1314]}
Probab=94.44 E-value=0.02 Score=31.91 Aligned_cols=39 Identities=18% Similarity=0.282 Sum_probs=34.1
Q ss_pred CCCEEEECCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCC
Q ss_conf 99136406897058899999999857199099983456579
Q 000823 466 NPRILLSGPAGSEIYQEMLAKALAHYFGAKLLIFDSHSLLG 506 (1267)
Q Consensus 466 s~rILLsgp~GsE~Yqe~LaKALA~~f~a~LL~lD~~~~~g 506 (1267)
+..|||.|||| .++.+||+|||..++..++.++...+..
T Consensus 32 P~~ilL~GpPG--tGKT~la~~la~~~~~~~~~i~~d~~~~ 70 (273)
T d1gvnb_ 32 PTAFLLGGQPG--SGKTSLRSAIFEETQGNVIVIDNDTFKQ 70 (273)
T ss_dssp CEEEEEECCTT--SCTHHHHHHHHHHTTTCCEEECTHHHHT
T ss_pred CEEEEEECCCC--CCHHHHHHHHHHHHHCCEEEEECHHHHH
T ss_conf 97999889799--8899999999998651548983289999
No 121
>d1m7ga_ c.37.1.4 (A:) Adenosine-5'phosphosulfate kinase (APS kinase) {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=94.29 E-value=0.035 Score=30.09 Aligned_cols=37 Identities=22% Similarity=0.259 Sum_probs=31.6
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHH----CCCEEEEECCCCC
Q ss_conf 249999589983999999999991----9956996111000
Q 000823 971 KGILLFGPPGTGKTMLAKAVATEA----GANFINISMSSIT 1007 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkAIA~el----g~~vi~Id~seL~ 1007 (1267)
.-|+|.|.||+|||++|++|+..+ +.+++.++...+.
T Consensus 25 ~vIwltGlsGsGKTTia~~L~~~l~~~~~~~~~~ldgD~iR 65 (208)
T d1m7ga_ 25 LTIWLTGLSASGKSTLAVELEHQLVRDRRVHAYRLDGDNIR 65 (208)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHHHHHHCCCEEEECHHHHT
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEECCHHHH
T ss_conf 69999899999989999999988777427508997536788
No 122
>d1nlfa_ c.37.1.11 (A:) Hexameric replicative helicase repA {Escherichia coli [TaxId: 562]}
Probab=94.23 E-value=0.13 Score=25.79 Aligned_cols=136 Identities=12% Similarity=0.136 Sum_probs=67.2
Q ss_pred CCCEEEEECCCCCHHHHHHHHHHHHH-------------CCCEEEEECCCCCHHC--------CCC--------------
Q ss_conf 98249999589983999999999991-------------9956996111000100--------275--------------
Q 000823 969 PCKGILLFGPPGTGKTMLAKAVATEA-------------GANFINISMSSITSKW--------FGE-------------- 1013 (1267)
Q Consensus 969 P~~gILL~GPpGTGKT~LAkAIA~el-------------g~~vi~Id~seL~s~~--------~Ge-------------- 1013 (1267)
|..-.+|+|++|+|||+++..+|..+ +.+++.++........ .+.
T Consensus 28 pg~~~~i~G~~G~GKS~l~l~la~~ia~g~~~~~~~~~~~~~vl~~~~E~~~~~~~~Rl~~~~~~~~~~~~~~~~~~~~~ 107 (274)
T d1nlfa_ 28 AGTVGALVSPGGAGKSMLALQLAAQIAGGPDLLEVGELPTGPVIYLPAEDPPTAIHHRLHALGAHLSAEERQAVADGLLI 107 (274)
T ss_dssp TTSEEEEEESTTSSHHHHHHHHHHHHHTCCCTTCCCCCCCCCEEEEESSSCHHHHHHHHHHHHTTSCHHHHHHHHHHEEE
T ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCEE
T ss_conf 89589999289998999999999999769972111235787368985123499999999998623686665312333232
Q ss_pred -----------CHHHHHHHHHHHHHCCCEEEEECCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEC
Q ss_conf -----------189999999998712991799935212213899984379999998865542168865677768999943
Q 000823 1014 -----------GEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDTERILVLAAT 1082 (1267)
Q Consensus 1014 -----------~ek~I~~iF~~A~k~~PsIIiIDEID~L~~~r~~~~~~~a~~~il~~LL~~ldgl~~~~~~~VlVIaTT 1082 (1267)
....+..+ ......+.+|+||.+..+.+...+ .......++..+...... .+..+++|.-+
T Consensus 108 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~lvviD~l~~~~~~~~~--~~~~~~~~~~~l~~la~~----~~~~vi~v~H~ 179 (274)
T d1nlfa_ 108 QPLIGSLPNIMAPEWFDGL--KRAAEGRRLMVLDTLRRFHIEEEN--ASGPMAQVIGRMEAIAAD----TGCSIVFLHHA 179 (274)
T ss_dssp CCCTTSCCCTTSHHHHHHH--HHHHTTCSEEEEECGGGGCCSCTT--CHHHHHHHHHHHHHHHHH----HCCEEEEEEEC
T ss_pred CCCCCCCCHHHHHHHHHHH--HHHCCCCCEEECCCHHHHCCCCCC--CHHHHHHHHHHHHHHHHC----CCCCEEHHHHC
T ss_conf 1456742035789999998--875267658962813542266523--225689999887777644----79754013100
Q ss_pred CCCCCCC------H------HHHHCCCCCCCCCCCCHHHHHH
Q ss_conf 9999995------9------9982035443699999889999
Q 000823 1083 NRPFDLD------E------AVIRRLPRRLMVNLPDAPNRAK 1112 (1267)
Q Consensus 1083 N~p~~Ld------~------aLlrRFd~~I~v~~Pd~eeR~e 1112 (1267)
|....-. . ++..-.+.++.+..+..++..+
T Consensus 180 ~K~~~~~~~~~~~~~~~Gssai~~~a~~v~~l~r~~~~~~~~ 221 (274)
T d1nlfa_ 180 SKGAAMMGAGDQQQASRGSSVLVDNIRWQSYLSSMTSAEAEE 221 (274)
T ss_dssp --------------------CTGGGCSCEEEEEECCHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHCCEEEEEEECCHHHHHH
T ss_conf 555444688665335642777874255899998355035554
No 123
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=93.93 E-value=0.029 Score=30.67 Aligned_cols=26 Identities=23% Similarity=0.373 Sum_probs=23.0
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHHCC
Q ss_conf 24999958998399999999999199
Q 000823 971 KGILLFGPPGTGKTMLAKAVATEAGA 996 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkAIA~elg~ 996 (1267)
+-|+|.|+||+|||++++.|+..++.
T Consensus 2 kiI~i~G~~GsGKsT~~~~L~~~l~~ 27 (190)
T d1khta_ 2 KVVVVTGVPGVGSTTSSQLAMDNLRK 27 (190)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHHHT
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHH
T ss_conf 88999899998989999999999987
No 124
>d1sxjb2 c.37.1.20 (B:7-230) Replication factor C4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=93.89 E-value=0.084 Score=27.29 Aligned_cols=75 Identities=12% Similarity=0.143 Sum_probs=53.8
Q ss_pred CCEEEEECCHHHHHCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCC
Q ss_conf 98499972504341389422567899872199948999410357883345899986201347731111013578843443
Q 000823 691 CPFILFMKDAEKSIAGNSDSYSTFKSRLEKLPDKVIVIGSHTHTDNRKEKSHPGGLLFTKFGSNQTALLDLAFPDSFGRL 770 (1267)
Q Consensus 691 ~p~Ilfi~di~~~l~g~~~~~~~lk~~L~~l~g~vvvIGs~~~~d~~~~~~~~~~~~l~~~g~~~~~l~d~a~~~~~~r~ 770 (1267)
..-|++|||+|.+... ..+.+...++..+.+..+|..++..+.
T Consensus 101 ~~kviiiDe~d~~~~~---~~~~ll~~~e~~~~~~~~i~~~~~~~~---------------------------------- 143 (224)
T d1sxjb2 101 KHKIVILDEADSMTAG---AQQALRRTMELYSNSTRFAFACNQSNK---------------------------------- 143 (224)
T ss_dssp CCEEEEEESGGGSCHH---HHHTTHHHHHHTTTTEEEEEEESCGGG----------------------------------
T ss_pred CEEEEEEECCCCCCHH---HHHHHHHHCCCCCCCEEEEECCCCHHH----------------------------------
T ss_conf 3599998244323215---778775201123333366531474302----------------------------------
Q ss_pred CCCCCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHH
Q ss_conf 335787036788984208973997079878899999985465
Q 000823 771 HDRGKEIPKATKLLTKLFPNKVTIHMPQDEALLASWKHQLDR 812 (1267)
Q Consensus 771 ~~~~~~~~~~d~~l~rlFp~~IeI~LPdeE~RL~Ilk~qLek 812 (1267)
+..+|-.|+ ..|.++.|+.+....++...+.+
T Consensus 144 ---------i~~~l~sr~-~~i~~~~~~~~~i~~~l~~i~~~ 175 (224)
T d1sxjb2 144 ---------IIEPLQSQC-AILRYSKLSDEDVLKRLLQIIKL 175 (224)
T ss_dssp ---------SCHHHHTTS-EEEECCCCCHHHHHHHHHHHHHH
T ss_pred ---------HHHHHHHHH-HHHHHCCCCHHHHHHHHHHHHHH
T ss_conf ---------106788777-77653133224567888777774
No 125
>d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Probab=93.77 E-value=0.16 Score=25.17 Aligned_cols=97 Identities=7% Similarity=-0.032 Sum_probs=54.0
Q ss_pred HHHHHHHHHHHHHHCCCCCEEEEECCHHHHHCCCCCH-HHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 9999999999863014798499972504341389422-567899872199948999410357883345899986201347
Q 000823 674 KLLINTLFEVVFSESRSCPFILFMKDAEKSIAGNSDS-YSTFKSRLEKLPDKVIVIGSHTHTDNRKEKSHPGGLLFTKFG 752 (1267)
Q Consensus 674 k~~i~~L~ev~~~~~~~~p~Ilfi~di~~~l~g~~~~-~~~lk~~L~~l~g~vvvIGs~~~~d~~~~~~~~~~~~l~~~g 752 (1267)
..+++.+.+.+.. .....++++++++......... ...+......-...+.+|+.++..+.
T Consensus 109 ~~~~~~~~~~~~~--~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---------------- 170 (276)
T d1fnna2 109 DEFLALLVEHLRE--RDLYMFLVLDDAFNLAPDILSTFIRLGQEADKLGAFRIALVIVGHNDAV---------------- 170 (276)
T ss_dssp HHHHHHHHHHHHH--TTCCEEEEEETGGGSCHHHHHHHHHHTTCHHHHSSCCEEEEEEESSTHH----------------
T ss_pred HHHHHHHHHHHHH--CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHH----------------
T ss_conf 5789999998752--0654332036888753543106888874044335652488625876454----------------
Q ss_pred CCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHH-HHCCCCEEEECCCCHHHHHHHHHHHHHH
Q ss_conf 73111101357884344333578703678898-4208973997079878899999985465
Q 000823 753 SNQTALLDLAFPDSFGRLHDRGKEIPKATKLL-TKLFPNKVTIHMPQDEALLASWKHQLDR 812 (1267)
Q Consensus 753 ~~~~~l~d~a~~~~~~r~~~~~~~~~~~d~~l-~rlFp~~IeI~LPdeE~RL~Ilk~qLek 812 (1267)
++ + ++..+ .++.+..|.++.|+.+++.+|++..++.
T Consensus 171 ------~~--------~----------~~~~~~~r~~~~~i~~~~~~~~e~~~il~~r~~~ 207 (276)
T d1fnna2 171 ------LN--------N----------LDPSTRGIMGKYVIRFSPYTKDQIFDILLDRAKA 207 (276)
T ss_dssp ------HH--------T----------SCHHHHHHHTTCEEECCCCBHHHHHHHHHHHHHH
T ss_pred ------HH--------H----------CCHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHH
T ss_conf ------43--------1----------1303665511011034412388899999999998
No 126
>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Escherichia coli [TaxId: 562]}
Probab=93.69 E-value=0.049 Score=29.05 Aligned_cols=31 Identities=29% Similarity=0.195 Sum_probs=25.3
Q ss_pred EEEEECCCCCHHHHHHHHHHHHH---CCCEEEEE
Q ss_conf 49999589983999999999991---99569961
Q 000823 972 GILLFGPPGTGKTMLAKAVATEA---GANFINIS 1002 (1267)
Q Consensus 972 gILL~GPpGTGKT~LAkAIA~el---g~~vi~Id 1002 (1267)
-+.|.|++|+|||+|++.|+.++ |..+..+.
T Consensus 4 vi~itG~~GSGKTTL~~~L~~~l~~~g~~v~v~~ 37 (170)
T d1np6a_ 4 LLAFAAWSGTGKTTLLKKLIPALCARGIRPGLIK 37 (170)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEC
T ss_conf 8999918999899999999999997797687741
No 127
>d1a5ta2 c.37.1.20 (A:1-207) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=93.19 E-value=0.2 Score=24.51 Aligned_cols=87 Identities=10% Similarity=0.124 Sum_probs=62.7
Q ss_pred HHHHHHHHHHHHCC-CCCEEEEECCHHHHHCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99999999863014-79849997250434138942256789987219994899941035788334589998620134773
Q 000823 676 LINTLFEVVFSESR-SCPFILFMKDAEKSIAGNSDSYSTFKSRLEKLPDKVIVIGSHTHTDNRKEKSHPGGLLFTKFGSN 754 (1267)
Q Consensus 676 ~i~~L~ev~~~~~~-~~p~Ilfi~di~~~l~g~~~~~~~lk~~L~~l~g~vvvIGs~~~~d~~~~~~~~~~~~l~~~g~~ 754 (1267)
.++.|.+.+..-+. .+.-|+.|||+|.+ +.++.+.|...|+.-+.++++|..++..+.
T Consensus 92 ~ir~l~~~~~~~~~~~~~kviIide~d~l---~~~a~n~Llk~lEep~~~~~fIl~t~~~~~------------------ 150 (207)
T d1a5ta2 92 AVREVTEKLNEHARLGGAKVVWVTDAALL---TDAAANALLKTLEEPPAETWFFLATREPER------------------ 150 (207)
T ss_dssp HHHHHHHHTTSCCTTSSCEEEEESCGGGB---CHHHHHHHHHHHTSCCTTEEEEEEESCGGG------------------
T ss_pred HHHHHHHHHHHCCCCCCCCEEEECHHHHH---HHHHHHHHHHHHHHHCCCCEEEEEECCHHH------------------
T ss_conf 14677653211003576404773134420---000149999999850111104553068655------------------
Q ss_pred HHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHH
Q ss_conf 1111013578843443335787036788984208973997079878899999985
Q 000823 755 QTALLDLAFPDSFGRLHDRGKEIPKATKLLTKLFPNKVTIHMPQDEALLASWKHQ 809 (1267)
Q Consensus 755 ~~~l~d~a~~~~~~r~~~~~~~~~~~d~~l~rlFp~~IeI~LPdeE~RL~Ilk~q 809 (1267)
+..+|--|. ..|.|..|+.+.....++..
T Consensus 151 -------------------------ll~tI~SRc-~~i~~~~~~~~~~~~~L~~~ 179 (207)
T d1a5ta2 151 -------------------------LLATLRSRC-RLHYLAPPPEQYAVTWLSRE 179 (207)
T ss_dssp -------------------------SCHHHHTTS-EEEECCCCCHHHHHHHHHHH
T ss_pred -------------------------HHHHHCCEE-EEEECCCCCHHHHHHHHHHC
T ss_conf -------------------------103200215-78826899999999999974
No 128
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]}
Probab=93.15 E-value=0.054 Score=28.72 Aligned_cols=33 Identities=27% Similarity=0.245 Sum_probs=25.8
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHHC---CCEEEEEC
Q ss_conf 2499995899839999999999919---95699611
Q 000823 971 KGILLFGPPGTGKTMLAKAVATEAG---ANFINISM 1003 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkAIA~elg---~~vi~Id~ 1003 (1267)
+-++|.|++|+|||++++.|+..++ +.+..+..
T Consensus 2 kiivi~G~~GsGKTT~~~~La~~L~~~~~~~~~~~~ 37 (194)
T d1nksa_ 2 KIGIVTGIPGVGKSTVLAKVKEILDNQGINNKIINY 37 (194)
T ss_dssp EEEEEEECTTSCHHHHHHHHHHHHHTTTCCEEEEEH
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEC
T ss_conf 199998989989899999999999876998899978
No 129
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=93.05 E-value=0.049 Score=28.99 Aligned_cols=30 Identities=33% Similarity=0.459 Sum_probs=25.2
Q ss_pred EEEEECCCCCHHHHHHHHHHHHHCCCEEEE
Q ss_conf 499995899839999999999919956996
Q 000823 972 GILLFGPPGTGKTMLAKAVATEAGANFINI 1001 (1267)
Q Consensus 972 gILL~GPpGTGKT~LAkAIA~elg~~vi~I 1001 (1267)
-|.|.||+|+|||+|++.++...+..|...
T Consensus 2 pIvl~GPsGsGK~tl~~~L~~~~~~~~~~~ 31 (190)
T d1lvga_ 2 PVVLSGPSGAGKSTLLKKLFQEHSSIFGFS 31 (190)
T ss_dssp CEEEECCTTSSHHHHHHHHHHHHTTTEEEC
T ss_pred EEEEECCCCCCHHHHHHHHHHHCCCCEEEE
T ss_conf 199999999999999999997488760577
No 130
>d1sxjd2 c.37.1.20 (D:26-262) Replication factor C2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=93.03 E-value=0.057 Score=28.53 Aligned_cols=76 Identities=9% Similarity=0.084 Sum_probs=53.7
Q ss_pred CCCEEEEECCHHHHHCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCC
Q ss_conf 79849997250434138942256789987219994899941035788334589998620134773111101357884344
Q 000823 690 SCPFILFMKDAEKSIAGNSDSYSTFKSRLEKLPDKVIVIGSHTHTDNRKEKSHPGGLLFTKFGSNQTALLDLAFPDSFGR 769 (1267)
Q Consensus 690 ~~p~Ilfi~di~~~l~g~~~~~~~lk~~L~~l~g~vvvIGs~~~~d~~~~~~~~~~~~l~~~g~~~~~l~d~a~~~~~~r 769 (1267)
...-||+|||++.+. .+..+.+...++..+.+.++|..++..+.
T Consensus 107 ~~~~viiiDe~d~l~---~~~~~~l~~~~~~~~~~~~~i~~~~~~~~--------------------------------- 150 (237)
T d1sxjd2 107 PPYKIIILDEADSMT---ADAQSALRRTMETYSGVTRFCLICNYVTR--------------------------------- 150 (237)
T ss_dssp CSCEEEEETTGGGSC---HHHHHHHHHHHHHTTTTEEEEEEESCGGG---------------------------------
T ss_pred CCCEEEEEECCCCCC---HHHHHHHHHCCCCCCCCCCCCCCCCCCCC---------------------------------
T ss_conf 673699995513367---77788876301222233332122466422---------------------------------
Q ss_pred CCCCCCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHH
Q ss_conf 3335787036788984208973997079878899999985465
Q 000823 770 LHDRGKEIPKATKLLTKLFPNKVTIHMPQDEALLASWKHQLDR 812 (1267)
Q Consensus 770 ~~~~~~~~~~~d~~l~rlFp~~IeI~LPdeE~RL~Ilk~qLek 812 (1267)
....|..|| ..|.|..|+.+....+++..+.+
T Consensus 151 ----------~~~~l~sr~-~~i~f~~~~~~~~~~~L~~i~~~ 182 (237)
T d1sxjd2 151 ----------IIDPLASQC-SKFRFKALDASNAIDRLRFISEQ 182 (237)
T ss_dssp ----------SCHHHHHHS-EEEECCCCCHHHHHHHHHHHHHT
T ss_pred ----------CCCCCCCHH-HHHCCCCCCCCCCCHHHHHHHHH
T ss_conf ----------233111000-11023333332110010114555
No 131
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR, ribosylnicotinamide kinase domain {Haemophilus influenzae [TaxId: 727]}
Probab=93.02 E-value=0.029 Score=30.67 Aligned_cols=37 Identities=14% Similarity=0.118 Sum_probs=31.2
Q ss_pred CCCEEEECCCCCHHHHHHHHHHHHHHHCCEEEEEECCCC
Q ss_conf 991364068970588999999998571990999834565
Q 000823 466 NPRILLSGPAGSEIYQEMLAKALAHYFGAKLLIFDSHSL 504 (1267)
Q Consensus 466 s~rILLsgp~GsE~Yqe~LaKALA~~f~a~LL~lD~~~~ 504 (1267)
+++|++.||+| .++.+|||+||++|+.+++..+...+
T Consensus 7 ~K~I~i~G~~G--sGKTTla~~La~~~~~~~i~~~~~~~ 43 (192)
T d1lw7a2 7 AKTVAILGGES--SGKSVLVNKLAAVFNTTSAWEYGREF 43 (192)
T ss_dssp CEEEEEECCTT--SHHHHHHHHHHHHTTCEEECCTTHHH
T ss_pred CEEEEEECCCC--CCHHHHHHHHHHHHCCCEEEEEHHHH
T ss_conf 32899989999--98999999999984998675316777
No 132
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus stearothermophilus [TaxId: 1422]}
Probab=92.84 E-value=0.22 Score=24.17 Aligned_cols=34 Identities=21% Similarity=0.181 Sum_probs=25.5
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHHC---CCEEEEECC
Q ss_conf 2499995899839999999999919---956996111
Q 000823 971 KGILLFGPPGTGKTMLAKAVATEAG---ANFINISMS 1004 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkAIA~elg---~~vi~Id~s 1004 (1267)
.=|-|.||+|+|||++|+.|+..++ .....++..
T Consensus 23 ~iIgI~G~~GSGKSTla~~L~~~l~~~~~~~~~~~~~ 59 (198)
T d1rz3a_ 23 LVLGIDGLSRSGKTTLANQLSQTLREQGISVCVFHMD 59 (198)
T ss_dssp EEEEEEECTTSSHHHHHHHHHHHHHHTTCCEEEEEGG
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHCCCCCCCEECCCC
T ss_conf 8999789887899999999999836346652001220
No 133
>d1yksa1 c.37.1.14 (A:185-324) YFV helicase domain {Yellow fever virus [TaxId: 11089]}
Probab=92.69 E-value=0.16 Score=25.24 Aligned_cols=25 Identities=28% Similarity=0.203 Sum_probs=18.0
Q ss_pred CCEEEEECCCCCHHHHHHH-HHHHHH
Q ss_conf 8249999589983999999-999991
Q 000823 970 CKGILLFGPPGTGKTMLAK-AVATEA 994 (1267)
Q Consensus 970 ~~gILL~GPpGTGKT~LAk-AIA~el 994 (1267)
...++|.+|+|+|||..+- ++....
T Consensus 7 ~~~~il~~~tGsGKT~~~~~~~~~~~ 32 (140)
T d1yksa1 7 GMTTVLDFHPGAGKTRRFLPQILAEC 32 (140)
T ss_dssp TCEEEECCCTTSSTTTTHHHHHHHHH
T ss_pred CCCEEEECCCCCCHHHHHHHHHHHHH
T ss_conf 99679981799885599999999975
No 134
>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=92.29 E-value=0.083 Score=27.32 Aligned_cols=29 Identities=38% Similarity=0.508 Sum_probs=24.4
Q ss_pred EEEEECCCCCHHHHHHHHHHHHHCCCEEE
Q ss_conf 49999589983999999999991995699
Q 000823 972 GILLFGPPGTGKTMLAKAVATEAGANFIN 1000 (1267)
Q Consensus 972 gILL~GPpGTGKT~LAkAIA~elg~~vi~ 1000 (1267)
.|+|.||+|+||++|++.++.+....|..
T Consensus 3 pIvl~GpsG~GK~tl~~~L~~~~~~~~~~ 31 (186)
T d1gkya_ 3 PIVISGPSGTGKSTLLKKLFAEYPDSFGF 31 (186)
T ss_dssp CEEEECCTTSSHHHHHHHHHHHCTTTEEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHCCCCEEE
T ss_conf 69998999999899999999748866247
No 135
>d1gkub1 c.37.1.16 (B:1-250) Helicase-like "domain" of reverse gyrase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=92.01 E-value=0.27 Score=23.44 Aligned_cols=32 Identities=25% Similarity=0.281 Sum_probs=21.4
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHH---CCCEEEEE
Q ss_conf 249999589983999999999991---99569961
Q 000823 971 KGILLFGPPGTGKTMLAKAVATEA---GANFINIS 1002 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkAIA~el---g~~vi~Id 1002 (1267)
+++++.+|+|+|||..+-..+... +..++.+.
T Consensus 59 ~~~~i~apTGsGKT~~~~~~~~~~~~~~~rvliv~ 93 (237)
T d1gkub1 59 ESFAATAPTGVGKTSFGLAMSLFLALKGKRCYVIF 93 (237)
T ss_dssp CCEECCCCBTSCSHHHHHHHHHHHHTTSCCEEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHHHHHCCEEEEEE
T ss_conf 97799926897699999999999987458389994
No 136
>d2fz4a1 c.37.1.19 (A:24-229) DNA repair protein RAD25 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=91.64 E-value=0.3 Score=23.16 Aligned_cols=32 Identities=25% Similarity=0.244 Sum_probs=26.0
Q ss_pred EEEEECCCCCHHHHHHHHHHHHHCCCEEEEEC
Q ss_conf 49999589983999999999991995699611
Q 000823 972 GILLFGPPGTGKTMLAKAVATEAGANFINISM 1003 (1267)
Q Consensus 972 gILL~GPpGTGKT~LAkAIA~elg~~vi~Id~ 1003 (1267)
+.++..|+|+|||.++-+++.+++.+.+-+..
T Consensus 87 ~~ll~~~tG~GKT~~a~~~~~~~~~~~Liv~p 118 (206)
T d2fz4a1 87 RGCIVLPTGSGKTHVAMAAINELSTPTLIVVP 118 (206)
T ss_dssp EEEEEESSSTTHHHHHHHHHHHSCSCEEEEES
T ss_pred CCEEEECCCCCCEEHHHHHHHHHCCCEEEEEC
T ss_conf 90999578998264377678774672457872
No 137
>d1sq5a_ c.37.1.6 (A:) Pantothenate kinase PanK {Escherichia coli [TaxId: 562]}
Probab=90.37 E-value=0.39 Score=22.32 Aligned_cols=40 Identities=15% Similarity=0.107 Sum_probs=30.7
Q ss_pred CCCCCEEEEECCCCCHHHHHHHHHHHHHC-----CCEEEEECCCC
Q ss_conf 88982499995899839999999999919-----95699611100
Q 000823 967 TKPCKGILLFGPPGTGKTMLAKAVATEAG-----ANFINISMSSI 1006 (1267)
Q Consensus 967 ~kP~~gILL~GPpGTGKT~LAkAIA~elg-----~~vi~Id~seL 1006 (1267)
.+.+-=|-|.|++|+|||++|+.|+..+. ..+..+++-.+
T Consensus 77 ~k~P~iIGIaG~sgSGKSTla~~L~~lL~~~~~~~~v~~Is~D~F 121 (308)
T d1sq5a_ 77 QRIPYIISIAGSVAVGKSTTARVLQALLSRWPEHRRVELITTDGF 121 (308)
T ss_dssp CCCCEEEEEEECTTSSHHHHHHHHHHHHTTSTTCCCEEEEEGGGG
T ss_pred CCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEEE
T ss_conf 899889999689999876899999999730468996599952156
No 138
>d1v5wa_ c.37.1.11 (A:) Meiotic recombination protein DMC1/LIM15 homolog {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.99 E-value=0.2 Score=24.41 Aligned_cols=28 Identities=29% Similarity=0.283 Sum_probs=23.0
Q ss_pred CCCCCEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 8898249999589983999999999991
Q 000823 967 TKPCKGILLFGPPGTGKTMLAKAVATEA 994 (1267)
Q Consensus 967 ~kP~~gILL~GPpGTGKT~LAkAIA~el 994 (1267)
..+..-++|+||||+|||.+|..+|...
T Consensus 34 ip~G~~~~i~G~~GsGKT~lalq~~~~~ 61 (258)
T d1v5wa_ 34 IESMAITEAFGEFRTGKTQLSHTLCVTA 61 (258)
T ss_dssp BCSSEEEEEECCTTCTHHHHHHHHHHHT
T ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHHH
T ss_conf 7689799998899887889999999999
No 139
>d2p6ra3 c.37.1.19 (A:1-202) Hel308 helicase {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=89.91 E-value=0.42 Score=22.06 Aligned_cols=23 Identities=43% Similarity=0.645 Sum_probs=17.4
Q ss_pred CEEEEECCCCCHHHHHHHH-HHHH
Q ss_conf 2499995899839999999-9999
Q 000823 971 KGILLFGPPGTGKTMLAKA-VATE 993 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkA-IA~e 993 (1267)
+++++..|+|+|||.++-. +...
T Consensus 41 ~~~il~apTGsGKT~~a~l~i~~~ 64 (202)
T d2p6ra3 41 KNLLLAMPTAAGKTLLAEMAMVRE 64 (202)
T ss_dssp SCEEEECSSHHHHHHHHHHHHHHH
T ss_pred CCEEEECCCCCCHHHHHHHHHHHH
T ss_conf 998998689985117899999987
No 140
>d2pmka1 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein {Escherichia coli [TaxId: 562]}
Probab=89.68 E-value=0.44 Score=21.94 Aligned_cols=25 Identities=28% Similarity=0.355 Sum_probs=19.1
Q ss_pred CCEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 8249999589983999999999991
Q 000823 970 CKGILLFGPPGTGKTMLAKAVATEA 994 (1267)
Q Consensus 970 ~~gILL~GPpGTGKT~LAkAIA~el 994 (1267)
...+-|.||+|+|||+|++.++..+
T Consensus 29 Ge~vaIvG~sGsGKSTLl~ll~gl~ 53 (241)
T d2pmka1 29 GEVIGIVGRSGSGKSTLTKLIQRFY 53 (241)
T ss_dssp TCEEEEECSTTSSHHHHHHHHTTSS
T ss_pred CCEEEEECCCCCCHHHHHHHHHHCC
T ss_conf 9999999999998999999997357
No 141
>d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=89.56 E-value=0.17 Score=24.95 Aligned_cols=25 Identities=20% Similarity=0.474 Sum_probs=22.2
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHHC
Q ss_conf 2499995899839999999999919
Q 000823 971 KGILLFGPPGTGKTMLAKAVATEAG 995 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkAIA~elg 995 (1267)
+-|+|.||+|+||++|++.+..+..
T Consensus 3 ~iivl~GpsG~GK~tl~~~L~~~~~ 27 (182)
T d1znwa1 3 RVVVLSGPSAVGKSTVVRCLRERIP 27 (182)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHHST
T ss_pred EEEEEECCCCCCHHHHHHHHHHHCC
T ss_conf 4999989999999999999984589
No 142
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL2 [TaxId: 10090]}
Probab=89.52 E-value=0.31 Score=23.03 Aligned_cols=23 Identities=30% Similarity=0.458 Sum_probs=20.0
Q ss_pred CEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 24999958998399999999999
Q 000823 971 KGILLFGPPGTGKTMLAKAVATE 993 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkAIA~e 993 (1267)
..|+|.|++|+|||+|...+...
T Consensus 3 ~ki~ivG~~~~GKTsLi~~l~~~ 25 (165)
T d1ksha_ 3 LRLLMLGLDNAGKTTILKKFNGE 25 (165)
T ss_dssp EEEEEECSTTSSHHHHHHHHTTC
T ss_pred EEEEEECCCCCCHHHHHHHHCCC
T ss_conf 79999999998999999998089
No 143
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.47 E-value=0.45 Score=21.83 Aligned_cols=22 Identities=23% Similarity=0.487 Sum_probs=19.8
Q ss_pred EEEEECCCCCHHHHHHHHHHHH
Q ss_conf 4999958998399999999999
Q 000823 972 GILLFGPPGTGKTMLAKAVATE 993 (1267)
Q Consensus 972 gILL~GPpGTGKT~LAkAIA~e 993 (1267)
.|++.|++|+|||+|...+...
T Consensus 5 Ki~viG~~~vGKTsli~~l~~~ 26 (166)
T d1ctqa_ 5 KLVVVGAGGVGKSALTIQLIQN 26 (166)
T ss_dssp EEEEEESTTSSHHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHHHC
T ss_conf 9999997998999999999809
No 144
>d1htwa_ c.37.1.18 (A:) Hypothetical protein HI0065 {Haemophilus influenzae [TaxId: 727]}
Probab=89.39 E-value=0.24 Score=23.82 Aligned_cols=30 Identities=27% Similarity=0.391 Sum_probs=25.2
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHHHHHCCC
Q ss_conf 898249999589983999999999991995
Q 000823 968 KPCKGILLFGPPGTGKTMLAKAVATEAGAN 997 (1267)
Q Consensus 968 kP~~gILL~GPpGTGKT~LAkAIA~elg~~ 997 (1267)
+|..-|+|.|+-|+|||+++|.+++.++..
T Consensus 31 ~~g~ii~L~G~LGaGKTtfvr~~~~~lg~~ 60 (158)
T d1htwa_ 31 EKAIMVYLNGDLGAGKTTLTRGMLQGIGHQ 60 (158)
T ss_dssp SSCEEEEEECSTTSSHHHHHHHHHHHTTCC
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHCCCC
T ss_conf 998299996687765889999987642234
No 145
>d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Bacillus stearothermophilus [TaxId: 1422]}
Probab=89.36 E-value=0.34 Score=22.70 Aligned_cols=33 Identities=21% Similarity=0.170 Sum_probs=26.0
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHH---CCCEEEEEC
Q ss_conf 249999589983999999999991---995699611
Q 000823 971 KGILLFGPPGTGKTMLAKAVATEA---GANFINISM 1003 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkAIA~el---g~~vi~Id~ 1003 (1267)
+-+-+.|++|+|||+|+..++.++ |..+..+..
T Consensus 2 kii~I~G~~gSGKTTli~~l~~~L~~~g~~v~vik~ 37 (165)
T d1xjca_ 2 NVWQVVGYKHSGKTTLMEKWVAAAVREGWRVGTVKH 37 (165)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEEE
T ss_conf 099998099998999999999999867983799983
No 146
>d1n0wa_ c.37.1.11 (A:) DNA repair protein Rad51, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.35 E-value=0.18 Score=24.79 Aligned_cols=28 Identities=25% Similarity=0.298 Sum_probs=23.5
Q ss_pred CCCCCEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 8898249999589983999999999991
Q 000823 967 TKPCKGILLFGPPGTGKTMLAKAVATEA 994 (1267)
Q Consensus 967 ~kP~~gILL~GPpGTGKT~LAkAIA~el 994 (1267)
..+..-++|+||||+|||.++..+|...
T Consensus 20 i~~G~v~~i~G~~GsGKT~l~l~la~~~ 47 (242)
T d1n0wa_ 20 IETGSITEMFGEFRTGKTQICHTLAVTC 47 (242)
T ss_dssp EETTSEEEEECCTTSSHHHHHHHHHHHT
T ss_pred CCCCEEEEEEECCCCCHHHHHHHHHHHH
T ss_conf 8599799999589999999999999999
No 147
>d1kkma_ c.91.1.2 (A:) HPr kinase HprK C-terminal domain {Lactobacillus casei [TaxId: 1582]}
Probab=89.09 E-value=0.2 Score=24.42 Aligned_cols=34 Identities=26% Similarity=0.389 Sum_probs=26.9
Q ss_pred CCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECC
Q ss_conf 82499995899839999999999919956996111
Q 000823 970 CKGILLFGPPGTGKTMLAKAVATEAGANFINISMS 1004 (1267)
Q Consensus 970 ~~gILL~GPpGTGKT~LAkAIA~elg~~vi~Id~s 1004 (1267)
..++||.|++|+|||++|.++... |+.++.=|..
T Consensus 14 g~gvl~~G~sG~GKStlal~l~~~-g~~lv~DD~~ 47 (176)
T d1kkma_ 14 GLGVLITGDSGVGKSETALELVQR-GHRLIADDRV 47 (176)
T ss_dssp TEEEEEECCTTSCHHHHHHHHHHT-TCEEEEEEEE
T ss_pred CEEEEEEECCCCCHHHHHHHHHHC-CCEEEECCEE
T ss_conf 999999808999989999999985-9919816868
No 148
>d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.04 E-value=0.18 Score=24.82 Aligned_cols=27 Identities=22% Similarity=0.234 Sum_probs=23.2
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHHCCC
Q ss_conf 249999589983999999999991995
Q 000823 971 KGILLFGPPGTGKTMLAKAVATEAGAN 997 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkAIA~elg~~ 997 (1267)
-=|-|.|++|+|||++|+.|+..++..
T Consensus 3 ~iIgI~G~~gSGKSTla~~L~~~l~~~ 29 (213)
T d1uj2a_ 3 FLIGVSGGTASGKSSVCAKIVQLLGQN 29 (213)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHTTGG
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHCHH
T ss_conf 899998999787999999999996410
No 149
>d1odfa_ c.37.1.6 (A:) Hypothetical protein Ygr205W {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=88.99 E-value=0.49 Score=21.59 Aligned_cols=37 Identities=19% Similarity=0.259 Sum_probs=26.9
Q ss_pred CCEEEEECCCCCHHHHHHHHHHHHH------CCCEEEEECCCC
Q ss_conf 8249999589983999999999991------995699611100
Q 000823 970 CKGILLFGPPGTGKTMLAKAVATEA------GANFINISMSSI 1006 (1267)
Q Consensus 970 ~~gILL~GPpGTGKT~LAkAIA~el------g~~vi~Id~seL 1006 (1267)
+-=|-|.|++|+|||+++..|...+ ...+..+++-++
T Consensus 27 P~iIGi~G~qGSGKSTl~~~l~~~L~~~~~~~~~v~~iS~Ddf 69 (286)
T d1odfa_ 27 PLFIFFSGPQGSGKSFTSIQIYNHLMEKYGGEKSIGYASIDDF 69 (286)
T ss_dssp CEEEEEECCTTSSHHHHHHHHHHHHHHHHGGGSCEEEEEGGGG
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCC
T ss_conf 8899837998788999999999999987277860676356777
No 150
>d1pzna2 c.37.1.11 (A:96-349) DNA repair protein Rad51, catalytic domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=88.77 E-value=0.19 Score=24.65 Aligned_cols=26 Identities=35% Similarity=0.383 Sum_probs=22.2
Q ss_pred CCCEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 98249999589983999999999991
Q 000823 969 PCKGILLFGPPGTGKTMLAKAVATEA 994 (1267)
Q Consensus 969 P~~gILL~GPpGTGKT~LAkAIA~el 994 (1267)
+..-++|+||||+|||+++-.+|...
T Consensus 35 ~G~~~li~G~pGsGKT~~~lq~~~~~ 60 (254)
T d1pzna2 35 TQAITEVFGEFGSGKTQLAHTLAVMV 60 (254)
T ss_dssp SSEEEEEEESTTSSHHHHHHHHHHHT
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHH
T ss_conf 88799998589898899999999986
No 151
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit) {Cow (Bos taurus) [TaxId: 9913]}
Probab=88.74 E-value=0.5 Score=21.47 Aligned_cols=34 Identities=21% Similarity=0.336 Sum_probs=24.5
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHH-----CCCEEEEECC
Q ss_conf 249999589983999999999991-----9956996111
Q 000823 971 KGILLFGPPGTGKTMLAKAVATEA-----GANFINISMS 1004 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkAIA~el-----g~~vi~Id~s 1004 (1267)
..|||.|+.|+|||+|.+.+...- |+....++..
T Consensus 7 ~KilllG~~~vGKTsll~~~~~~~~~pTiG~~~~~~~~~ 45 (221)
T d1azta2 7 HRLLLLGAGESGKSTIVKQMRILHVVLTSGIFETKFQVD 45 (221)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHHCCCCCSCEEEEEEET
T ss_pred CEEEEECCCCCCHHHHHHHHHCCCCCCCCCEEEEEEEEC
T ss_conf 779999899998899999895098278888678999977
No 152
>d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34 {Garden pea (Pisum sativum) [TaxId: 3888]}
Probab=88.68 E-value=0.51 Score=21.44 Aligned_cols=25 Identities=28% Similarity=0.456 Sum_probs=21.5
Q ss_pred CCEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 8249999589983999999999991
Q 000823 970 CKGILLFGPPGTGKTMLAKAVATEA 994 (1267)
Q Consensus 970 ~~gILL~GPpGTGKT~LAkAIA~el 994 (1267)
...|+|.|.+|+||+++..+|..+-
T Consensus 32 ~l~I~LvG~tg~GKSSliN~ilg~~ 56 (257)
T d1h65a_ 32 SLTILVMGKGGVGKSSTVNSIIGER 56 (257)
T ss_dssp EEEEEEEESTTSSHHHHHHHHHTSC
T ss_pred CCEEEEECCCCCCHHHHHHHHHCCC
T ss_conf 7489998999986999999985898
No 153
>d1l8qa2 c.37.1.20 (A:77-289) Chromosomal replication initiation factor DnaA {Aquifex aeolicus [TaxId: 63363]}
Probab=88.58 E-value=0.52 Score=21.39 Aligned_cols=59 Identities=17% Similarity=0.201 Sum_probs=36.3
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCE
Q ss_conf 2332233443430458999998876303687511212333468991364068970588999999998571990
Q 000823 423 LQESFENFPYYLSENTKNVLIAASYIHLKHKDHAKYTSELTTVNPRILLSGPAGSEIYQEMLAKALAHYFGAK 495 (1267)
Q Consensus 423 ~~vsf~~FPYylse~tk~~L~~~~~~hL~~~~~~~~~~~L~~~s~rILLsgp~GsE~Yqe~LaKALA~~f~a~ 495 (1267)
-+.||||| +.++.-+.+...+-- +..+..+...-+.|+||+| .++.-|+.|+++++..+
T Consensus 5 ~~~tFdnF--~vg~~N~~a~~~~~~----------~~~~~~~~~n~l~l~G~~G--~GKTHLl~A~~~~~~~~ 63 (213)
T d1l8qa2 5 PKYTLENF--IVGEGNRLAYEVVKE----------ALENLGSLYNPIFIYGSVG--TGKTHLLQAAGNEAKKR 63 (213)
T ss_dssp TTCCSSSC--CCCTTTHHHHHHHHH----------HHHTTTTSCSSEEEECSSS--SSHHHHHHHHHHHHHHT
T ss_pred CCCCHHHC--CCCCCHHHHHHHHHH----------HHHCCCCCCCCEEEECCCC--CCHHHHHHHHHHHHCCC
T ss_conf 88976531--377749999999999----------9867687788579988899--83999999999874467
No 154
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo sapiens), ARL8A [TaxId: 9606]}
Probab=88.55 E-value=0.52 Score=21.38 Aligned_cols=23 Identities=26% Similarity=0.394 Sum_probs=19.9
Q ss_pred EEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 49999589983999999999991
Q 000823 972 GILLFGPPGTGKTMLAKAVATEA 994 (1267)
Q Consensus 972 gILL~GPpGTGKT~LAkAIA~el 994 (1267)
.|+|.|++|+|||+|...+...-
T Consensus 4 ki~i~G~~~~GKTsLl~~l~~~~ 26 (164)
T d1zd9a1 4 ELTLVGLQYSGKTTFVNVIASGQ 26 (164)
T ss_dssp EEEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHHCCC
T ss_conf 99999999989899999997197
No 155
>d1pjra1 c.37.1.19 (A:1-318) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]}
Probab=88.35 E-value=0.21 Score=24.36 Aligned_cols=24 Identities=29% Similarity=0.433 Sum_probs=17.3
Q ss_pred CEEEEECCCCCHHHH-HHHHHHHHH
Q ss_conf 249999589983999-999999991
Q 000823 971 KGILLFGPPGTGKTM-LAKAVATEA 994 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~-LAkAIA~el 994 (1267)
+.+|+.|+||||||+ |+..++..+
T Consensus 25 g~~lV~g~aGSGKTt~l~~ri~~ll 49 (318)
T d1pjra1 25 GPLLIMAGAGSGKTRVLTHRIAYLM 49 (318)
T ss_dssp SCEEEEECTTSCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCHHHHHHHHHHHHH
T ss_conf 9989995298668999999999999
No 156
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId: 9606]}
Probab=88.18 E-value=0.39 Score=22.30 Aligned_cols=22 Identities=23% Similarity=0.459 Sum_probs=19.5
Q ss_pred EEEEECCCCCHHHHHHHHHHHH
Q ss_conf 4999958998399999999999
Q 000823 972 GILLFGPPGTGKTMLAKAVATE 993 (1267)
Q Consensus 972 gILL~GPpGTGKT~LAkAIA~e 993 (1267)
.+++.|++|+|||+|+..+...
T Consensus 5 KivvvG~~~vGKTsli~r~~~~ 26 (173)
T d2a5ja1 5 KYIIIGDTGVGKSCLLLQFTDK 26 (173)
T ss_dssp EEEEESSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHCC
T ss_conf 9999999993999999999629
No 157
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Probab=87.90 E-value=0.56 Score=21.10 Aligned_cols=23 Identities=30% Similarity=0.465 Sum_probs=20.5
Q ss_pred CEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 24999958998399999999999
Q 000823 971 KGILLFGPPGTGKTMLAKAVATE 993 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkAIA~e 993 (1267)
+.|+|.|++|+|||+|..++...
T Consensus 1 k~V~ivG~~~~GKTsLl~~l~~~ 23 (207)
T d2fh5b1 1 RAVLFVGLCDSGKTLLFVRLLTG 23 (207)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHS
T ss_pred CEEEEECCCCCCHHHHHHHHHCC
T ss_conf 98999999998989999999809
No 158
>d2hyda1 c.37.1.12 (A:324-578) Putative multidrug export ATP-binding/permease protein SAV1866 {Staphylococcus aureus [TaxId: 1280]}
Probab=87.86 E-value=0.57 Score=21.08 Aligned_cols=24 Identities=21% Similarity=0.346 Sum_probs=16.0
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 249999589983999999999991
Q 000823 971 KGILLFGPPGTGKTMLAKAVATEA 994 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkAIA~el 994 (1267)
.-+.|.||+|+|||+|++.|+...
T Consensus 45 e~vaivG~sGsGKSTLl~ll~gl~ 68 (255)
T d2hyda1 45 ETVAFVGMSGGGKSTLINLIPRFY 68 (255)
T ss_dssp CEEEEECSTTSSHHHHHTTTTTSS
T ss_pred CEEEEECCCCCCHHHHHHHHHHCC
T ss_conf 899998899980999999997127
No 159
>d1wb9a2 c.37.1.12 (A:567-800) DNA repair protein MutS, the C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=87.70 E-value=0.58 Score=21.01 Aligned_cols=104 Identities=15% Similarity=0.134 Sum_probs=54.5
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHH-----CCC--------------EEEEECCCCCHHCCCCC---HHHHHHHHHHHHHC
Q ss_conf 249999589983999999999991-----995--------------69961110001002751---89999999998712
Q 000823 971 KGILLFGPPGTGKTMLAKAVATEA-----GAN--------------FINISMSSITSKWFGEG---EKYVKAVFSLASKI 1028 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkAIA~el-----g~~--------------vi~Id~seL~s~~~Ge~---ek~I~~iF~~A~k~ 1028 (1267)
+.++|+||-..|||++.|++|... |+. |..+...+-........ -..+..++..+.
T Consensus 42 ~~~iiTGpN~~GKSt~lk~i~l~~~laq~G~~VpA~~a~~~~~d~I~~~~~~~d~~~~~~S~F~~E~~~~~~il~~~~-- 119 (234)
T d1wb9a2 42 RMLIITGPNMGGKSTYMRQTALIALMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNAT-- 119 (234)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHHHHHTTTCCBSSSEEEECCCCEEEEEEC-----------CHHHHHHHHHHHHHCC--
T ss_pred EEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEECCCEECCCCHHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCC--
T ss_conf 399995467313689999879999998729767417666134420234874675343653189999999999997454--
Q ss_pred CCEEEEECCCHHHHCCCCCCCHHHHH-HHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCC
Q ss_conf 99179993521221389998437999-99988655421688656777689999439999995
Q 000823 1029 APSVIFVDEVDSMLGRRENPGEHEAM-RKMKNEFMVNWDGLRTKDTERILVLAATNRPFDLD 1089 (1267)
Q Consensus 1029 ~PsIIiIDEID~L~~~r~~~~~~~a~-~~il~~LL~~ldgl~~~~~~~VlVIaTTN~p~~Ld 1089 (1267)
..++++|||+-+ ..++.+..+. ..++..+.. ..+..+|.||...+...
T Consensus 120 ~~sLvliDE~~~----gT~~~eg~~l~~a~l~~l~~---------~~~~~~i~tTH~~~l~~ 168 (234)
T d1wb9a2 120 EYSLVLMDEIGR----GTSTYDGLSLAWACAENLAN---------KIKALTLFATHYFELTQ 168 (234)
T ss_dssp TTEEEEEESCCC----CSSSSHHHHHHHHHHHHHHH---------TTCCEEEEECSCGGGGG
T ss_pred CCCEEEECCCCC----CCCHHHHHHHHHHHHHHHHC---------CCCCEEEEECCHHHHHH
T ss_conf 660885322235----87745666789876454320---------45442898524687764
No 160
>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase TrmE (MnmE), G domain {Escherichia coli [TaxId: 562]}
Probab=87.68 E-value=0.58 Score=21.01 Aligned_cols=22 Identities=32% Similarity=0.576 Sum_probs=19.5
Q ss_pred EEEEECCCCCHHHHHHHHHHHH
Q ss_conf 4999958998399999999999
Q 000823 972 GILLFGPPGTGKTMLAKAVATE 993 (1267)
Q Consensus 972 gILL~GPpGTGKT~LAkAIA~e 993 (1267)
.|+|.|+||+|||+|..++...
T Consensus 3 kI~lvG~~nvGKSsLin~l~~~ 24 (161)
T d2gj8a1 3 KVVIAGRPNAGKSSLLNALAGR 24 (161)
T ss_dssp EEEEEESTTSSHHHHHHHHHTS
T ss_pred EEEEECCCCCCHHHHHHHHHCC
T ss_conf 9999899999899999999688
No 161
>d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=87.65 E-value=0.58 Score=20.99 Aligned_cols=23 Identities=22% Similarity=0.351 Sum_probs=20.4
Q ss_pred CEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 24999958998399999999999
Q 000823 971 KGILLFGPPGTGKTMLAKAVATE 993 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkAIA~e 993 (1267)
+-|.|.|.+|+|||+|..++...
T Consensus 6 ~~I~lvG~~~~GKSSLin~l~~~ 28 (178)
T d1wf3a1 6 GFVAIVGKPNVGKSTLLNNLLGV 28 (178)
T ss_dssp EEEEEECSTTSSHHHHHHHHHTS
T ss_pred CEEEEECCCCCCHHHHHHHHHCC
T ss_conf 69999999999999999999688
No 162
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL3 [TaxId: 10090]}
Probab=87.54 E-value=0.59 Score=20.95 Aligned_cols=22 Identities=45% Similarity=0.593 Sum_probs=19.5
Q ss_pred CEEEEECCCCCHHHHHHHHHHH
Q ss_conf 2499995899839999999999
Q 000823 971 KGILLFGPPGTGKTMLAKAVAT 992 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkAIA~ 992 (1267)
..+++.|++|+|||+|..++..
T Consensus 17 ~kI~vvG~~~vGKSsLi~~l~~ 38 (176)
T d1fzqa_ 17 VRILLLGLDNAGKTTLLKQLAS 38 (176)
T ss_dssp EEEEEEESTTSSHHHHHHHHCC
T ss_pred EEEEEECCCCCCHHHHHHHHHC
T ss_conf 7999999999899999999964
No 163
>d2p67a1 c.37.1.10 (A:1-327) LAO/AO transport system kinase ArgK {Escherichia coli [TaxId: 562]}
Probab=87.49 E-value=0.6 Score=20.93 Aligned_cols=36 Identities=28% Similarity=0.397 Sum_probs=27.4
Q ss_pred CCEEEEECCCCCHHHHHHHHHHHHH---C--CCEEEEECCC
Q ss_conf 8249999589983999999999991---9--9569961110
Q 000823 970 CKGILLFGPPGTGKTMLAKAVATEA---G--ANFINISMSS 1005 (1267)
Q Consensus 970 ~~gILL~GPpGTGKT~LAkAIA~el---g--~~vi~Id~se 1005 (1267)
...|=|.||||+|||+|..+++..+ + .-++.+|.+.
T Consensus 54 ~~~IgitG~pGaGKSTLi~~l~~~~~~~g~~vavlavDpss 94 (327)
T d2p67a1 54 TLRLGVTGTPGAGKSTFLEAFGMLLIREGLKVAVIAVDPSS 94 (327)
T ss_dssp SEEEEEEECTTSCHHHHHHHHHHHHHHTTCCEEEEEECCC-
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCE
T ss_conf 32897438999989999999999997569833220377761
No 164
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase {Streptomyces venezuelae [TaxId: 54571]}
Probab=87.43 E-value=0.32 Score=22.93 Aligned_cols=38 Identities=21% Similarity=0.292 Sum_probs=32.8
Q ss_pred CCCCEEEECCCCCHHHHHHHHHHHHHHHCCEEEEEECCCC
Q ss_conf 8991364068970588999999998571990999834565
Q 000823 465 VNPRILLSGPAGSEIYQEMLAKALAHYFGAKLLIFDSHSL 504 (1267)
Q Consensus 465 ~s~rILLsgp~GsE~Yqe~LaKALA~~f~a~LL~lD~~~~ 504 (1267)
.++=|+|+||+| -++.++||+||+.|+.+.+.+|.-.+
T Consensus 2 ~~kiI~l~G~~G--sGKsTva~~L~~~l~~~~~~~~~d~~ 39 (178)
T d1qhxa_ 2 TTRMIILNGGSS--AGKSGIVRCLQSVLPEPWLAFGVDSL 39 (178)
T ss_dssp CCCEEEEECCTT--SSHHHHHHHHHHHSSSCEEEEEHHHH
T ss_pred CCEEEEEECCCC--CCHHHHHHHHHHHCCCCEEEEECCHH
T ss_conf 985999989999--99899999999972899699614102
No 165
>d1e9ra_ c.37.1.11 (A:) Bacterial conjugative coupling protein TrwB {Escherichia coli [TaxId: 562]}
Probab=87.24 E-value=0.42 Score=22.06 Aligned_cols=74 Identities=14% Similarity=0.201 Sum_probs=40.0
Q ss_pred CCEEEEECCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCH--------HHHHCCCCCC
Q ss_conf 99179993521221389998437999999886554216886567776899994399999959--------9982035443
Q 000823 1029 APSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDTERILVLAATNRPFDLDE--------AVIRRLPRRL 1100 (1267)
Q Consensus 1029 ~PsIIiIDEID~L~~~r~~~~~~~a~~~il~~LL~~ldgl~~~~~~~VlVIaTTN~p~~Ld~--------aLlrRFd~~I 1100 (1267)
.|..+++||+..+..-. ...+ ++.... ...+.++.++..+..|.. .++.-+...|
T Consensus 276 ~~v~l~lDE~~~~~~~~-------~l~~----~l~~~R------k~Gv~~~l~~Qs~~ql~~~yg~~~a~~i~~n~~t~i 338 (433)
T d1e9ra_ 276 RRLWLFIDELASLEKLA-------SLAD----ALTKGR------KAGLRVVAGLQSTSQLDDVYGVKEAQTLRASFRSLV 338 (433)
T ss_dssp CCEEEEESCGGGSCBCS-------SHHH----HHHHCT------TTTEEEEEEESCHHHHHHHHCHHHHHHHHTTCCEEE
T ss_pred CCEEEEECHHHHHCCCH-------HHHH----HHHHHC------CCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCEE
T ss_conf 85499835375525608-------7999----999847------899159999364889999873889999998468589
Q ss_pred CC--CCCCHHHHHHHHHHHHHH
Q ss_conf 69--999988999999999830
Q 000823 1101 MV--NLPDAPNRAKILQVILAK 1120 (1267)
Q Consensus 1101 ~v--~~Pd~eeR~eILk~ll~k 1120 (1267)
.+ ..++.+..+ .+...+.+
T Consensus 339 ~~~~~~~d~~tae-~~s~~~G~ 359 (433)
T d1e9ra_ 339 VLGGSRTDPKTNE-DMSLSLGE 359 (433)
T ss_dssp EEECCTTCHHHHH-HHHHHHCE
T ss_pred EECCCCCCHHHHH-HHHHHHCC
T ss_conf 9537888889999-99997298
No 166
>d1uaaa1 c.37.1.19 (A:2-307) DEXX box DNA helicase {Escherichia coli, RepD [TaxId: 562]}
Probab=87.02 E-value=0.25 Score=23.69 Aligned_cols=23 Identities=26% Similarity=0.394 Sum_probs=16.5
Q ss_pred CEEEEECCCCCHHHHH-HHHHHHH
Q ss_conf 2499995899839999-9999999
Q 000823 971 KGILLFGPPGTGKTML-AKAVATE 993 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~L-AkAIA~e 993 (1267)
..+|+.|+||||||++ +..++..
T Consensus 15 ~~~lI~g~aGTGKTt~l~~rv~~l 38 (306)
T d1uaaa1 15 GPCLVLAGAGSGKTRVITNKIAHL 38 (306)
T ss_dssp SEEEECCCTTSCHHHHHHHHHHHH
T ss_pred CCEEEEEECCCCHHHHHHHHHHHH
T ss_conf 998999628843899999999999
No 167
>d1ko7a2 c.91.1.2 (A:130-298) HPr kinase HprK C-terminal domain {Staphylococcus xylosus [TaxId: 1288]}
Probab=87.01 E-value=0.31 Score=23.04 Aligned_cols=32 Identities=25% Similarity=0.421 Sum_probs=25.1
Q ss_pred CCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEE
Q ss_conf 824999958998399999999999199569961
Q 000823 970 CKGILLFGPPGTGKTMLAKAVATEAGANFINIS 1002 (1267)
Q Consensus 970 ~~gILL~GPpGTGKT~LAkAIA~elg~~vi~Id 1002 (1267)
..++||.|++|.|||++|-++... |..++.=|
T Consensus 15 g~gvli~G~sg~GKS~la~~l~~~-g~~li~DD 46 (169)
T d1ko7a2 15 GVGVLITGDSGIGKSETALELIKR-GHRLVADD 46 (169)
T ss_dssp TEEEEEEESTTSSHHHHHHHHHHT-TCEEEESS
T ss_pred CEEEEEEECCCCCHHHHHHHHHHC-CCEEEECC
T ss_conf 999999808999999999999984-99388178
No 168
>d1uf9a_ c.37.1.1 (A:) Dephospho-CoA kinase {Thermus thermophilus [TaxId: 274]}
Probab=86.83 E-value=0.36 Score=22.54 Aligned_cols=31 Identities=23% Similarity=0.305 Sum_probs=25.0
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHHCCCEEEEE
Q ss_conf 24999958998399999999999199569961
Q 000823 971 KGILLFGPPGTGKTMLAKAVATEAGANFINIS 1002 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkAIA~elg~~vi~Id 1002 (1267)
.=|-++|++|+|||++|+.+ .+.|++++..+
T Consensus 4 ~IIgitG~~gSGKstva~~l-~~~g~~~~~~D 34 (191)
T d1uf9a_ 4 IIIGITGNIGSGKSTVAALL-RSWGYPVLDLD 34 (191)
T ss_dssp EEEEEEECTTSCHHHHHHHH-HHTTCCEEEHH
T ss_pred EEEEEECCCCCCHHHHHHHH-HHCCCEEEECC
T ss_conf 89999898877899999999-98799099865
No 169
>d1knxa2 c.91.1.2 (A:133-309) HPr kinase HprK C-terminal domain {Mycoplasma pneumoniae [TaxId: 2104]}
Probab=86.72 E-value=0.25 Score=23.69 Aligned_cols=33 Identities=27% Similarity=0.380 Sum_probs=26.0
Q ss_pred CCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEC
Q ss_conf 8249999589983999999999991995699611
Q 000823 970 CKGILLFGPPGTGKTMLAKAVATEAGANFINISM 1003 (1267)
Q Consensus 970 ~~gILL~GPpGTGKT~LAkAIA~elg~~vi~Id~ 1003 (1267)
..++||.|++|+|||++|.++... |+.++.=|.
T Consensus 15 g~gvli~G~sG~GKS~lal~l~~~-G~~lvaDD~ 47 (177)
T d1knxa2 15 GVGVLLTGRSGIGKSECALDLINK-NHLFVGDDA 47 (177)
T ss_dssp TEEEEEEESSSSSHHHHHHHHHTT-TCEEEEEEE
T ss_pred CEEEEEECCCCCCHHHHHHHHHHC-CCCEECCCE
T ss_conf 999999818999989999999985-974165876
No 170
>d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955 {Pyrococcus abyssi [TaxId: 29292]}
Probab=86.71 E-value=0.52 Score=21.34 Aligned_cols=22 Identities=27% Similarity=0.513 Sum_probs=20.5
Q ss_pred EEEECCCCCHHHHHHHHHHHHH
Q ss_conf 9999589983999999999991
Q 000823 973 ILLFGPPGTGKTMLAKAVATEA 994 (1267)
Q Consensus 973 ILL~GPpGTGKT~LAkAIA~el 994 (1267)
+++.|++|+|||+|..++...+
T Consensus 3 i~v~G~~GsGKTTLl~~ll~~~ 24 (244)
T d1yrba1 3 VVFVGTAGSGKTTLTGEFGRYL 24 (244)
T ss_dssp EEEECSTTSSHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHH
T ss_conf 9999189983999999999988
No 171
>d1kgda_ c.37.1.1 (A:) Guanylate kinase-like domain of Cask {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.67 E-value=0.36 Score=22.57 Aligned_cols=26 Identities=23% Similarity=0.497 Sum_probs=22.3
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHHCC
Q ss_conf 24999958998399999999999199
Q 000823 971 KGILLFGPPGTGKTMLAKAVATEAGA 996 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkAIA~elg~ 996 (1267)
+-+.|.||+|+||++|++.+.....-
T Consensus 4 k~ivl~Gpsg~GK~tl~~~L~~~~~~ 29 (178)
T d1kgda_ 4 KTLVLLGAHGVGRRHIKNTLITKHPD 29 (178)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHCTT
T ss_pred CCEEEECCCCCCHHHHHHHHHHHCCC
T ss_conf 71999998999999999999970976
No 172
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF6 [TaxId: 9606]}
Probab=86.51 E-value=0.67 Score=20.55 Aligned_cols=23 Identities=26% Similarity=0.366 Sum_probs=20.0
Q ss_pred CEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 24999958998399999999999
Q 000823 971 KGILLFGPPGTGKTMLAKAVATE 993 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkAIA~e 993 (1267)
..|++.|++|+|||+|...+...
T Consensus 13 ~kIvlvG~~~vGKTSli~rl~~~ 35 (173)
T d1e0sa_ 13 MRILMLGLDAAGKTTILYKLKLG 35 (173)
T ss_dssp EEEEEEEETTSSHHHHHHHTTCC
T ss_pred EEEEEECCCCCCHHHHHHHHHCC
T ss_conf 79999999998789999998448
No 173
>d1hv8a1 c.37.1.19 (A:3-210) Putative DEAD box RNA helicase {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=86.51 E-value=0.67 Score=20.55 Aligned_cols=60 Identities=13% Similarity=0.125 Sum_probs=30.2
Q ss_pred CCCHHCCCCHHHHHHHHHHHHCCCCCHH--HHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 5610001409999999999857257625--6630898889824999958998399999999999
Q 000823 932 VTFDDIGALENVKDTLKELVMLPLQRPE--LFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATE 993 (1267)
Q Consensus 932 vt~ddI~Gle~vk~~L~e~I~~pl~~~e--~f~k~~~~kP~~gILL~GPpGTGKT~LAkAIA~e 993 (1267)
.+|+|++-...+.+.|.+.-.......+ .+... ......+++..|+|+|||...-..+.+
T Consensus 4 msf~~l~l~~~l~~~l~~~g~~~pt~iQ~~~ip~~--l~g~~d~iv~a~TGsGKT~~~~l~~~~ 65 (208)
T d1hv8a1 4 MNFNELNLSDNILNAIRNKGFEKPTDIQMKVIPLF--LNDEYNIVAQARTGSGKTASFAIPLIE 65 (208)
T ss_dssp CCGGGSSCCHHHHHHHHHHTCCSCCHHHHHHHHHH--HHTCSEEEEECCSSSSHHHHHHHHHHH
T ss_pred CCHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHH--HCCCCCEEEECHHCCCCCCEEECCCCC
T ss_conf 58877698999999999879999999999999999--849997464410034444002033321
No 174
>d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli [TaxId: 562]}
Probab=86.19 E-value=0.3 Score=23.14 Aligned_cols=25 Identities=24% Similarity=0.379 Sum_probs=22.0
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHHC
Q ss_conf 2499995899839999999999919
Q 000823 971 KGILLFGPPGTGKTMLAKAVATEAG 995 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkAIA~elg 995 (1267)
.=++|.||+|+||++|.+.+.....
T Consensus 3 ~livi~GPSG~GK~tl~~~L~~~~p 27 (205)
T d1s96a_ 3 TLYIVSAPSGAGKSSLIQALLKTQP 27 (205)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHSC
T ss_pred EEEEEECCCCCCHHHHHHHHHHHCC
T ss_conf 0999999999999999999986398
No 175
>d1nn5a_ c.37.1.1 (A:) Thymidylate kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.02 E-value=0.71 Score=20.38 Aligned_cols=31 Identities=19% Similarity=0.206 Sum_probs=25.5
Q ss_pred EEEEECCCCCHHHHHHHHHHHHH---CCCEEEEE
Q ss_conf 49999589983999999999991---99569961
Q 000823 972 GILLFGPPGTGKTMLAKAVATEA---GANFINIS 1002 (1267)
Q Consensus 972 gILL~GPpGTGKT~LAkAIA~el---g~~vi~Id 1002 (1267)
=|.|.|+.|+|||++++.|+..+ +.+++.+.
T Consensus 5 lI~ieG~dGsGKsT~~~~L~~~L~~~g~~v~~~~ 38 (209)
T d1nn5a_ 5 LIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLR 38 (209)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEE
T ss_conf 9999899888999999999999987799689996
No 176
>d2g9na1 c.37.1.19 (A:21-238) Initiation factor 4a {Human (Homo sapiens) [TaxId: 9606]}
Probab=85.78 E-value=0.72 Score=20.30 Aligned_cols=58 Identities=19% Similarity=0.267 Sum_probs=33.5
Q ss_pred CCCCCCCHHCCCCHHHHHHHHHHHHCCCCCHHHHHCCCC--CCCCCEEEEECCCCCHHHHHHH
Q ss_conf 998756100014099999999998572576256630898--8898249999589983999999
Q 000823 928 SDIGVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQL--TKPCKGILLFGPPGTGKTMLAK 988 (1267)
Q Consensus 928 ~~~~vt~ddI~Gle~vk~~L~e~I~~pl~~~e~f~k~~~--~kP~~gILL~GPpGTGKT~LAk 988 (1267)
+++-.+|++++-.+.+.+.|.+.= +.++.......+ ....+.+++..|+|+|||...-
T Consensus 8 ~e~i~sF~~l~L~~~l~~~L~~~g---~~~pt~iQ~~aip~il~g~dvl~~a~TGsGKTlayl 67 (218)
T d2g9na1 8 NEIVDSFDDMNLSESLLRGIYAYG---FEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFA 67 (218)
T ss_dssp CCCCCCGGGSCCCHHHHHHHHHHT---CCSCCHHHHHHHHHHHHTCCEEEECCTTSSHHHHHH
T ss_pred CCCCCCHHHCCCCHHHHHHHHHCC---CCCCCHHHHHHHHHHHCCCCEEEECCCCHHHHHHHH
T ss_conf 885589878797999999999889---999999999999999769988997256254455433
No 177
>d1ewqa2 c.37.1.12 (A:542-765) DNA repair protein MutS, the C-terminal domain {Thermus aquaticus [TaxId: 271]}
Probab=85.54 E-value=0.74 Score=20.21 Aligned_cols=67 Identities=24% Similarity=0.263 Sum_probs=37.9
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHH-----CCC--------------EEEEECCCCCHHCCCCCH---HHHHHHHHHHHHC
Q ss_conf 249999589983999999999991-----995--------------699611100010027518---9999999998712
Q 000823 971 KGILLFGPPGTGKTMLAKAVATEA-----GAN--------------FINISMSSITSKWFGEGE---KYVKAVFSLASKI 1028 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkAIA~el-----g~~--------------vi~Id~seL~s~~~Ge~e---k~I~~iF~~A~k~ 1028 (1267)
.-++|+||-..|||++.|+++-.. |+. +..+...+-...-..... +.+..++..+ .
T Consensus 36 ~~~iiTGpN~~GKSt~lk~i~l~~ilAq~G~~vpA~~~~i~~~d~I~~~~~~~d~~~~~~StF~~el~~~~~il~~~--~ 113 (224)
T d1ewqa2 36 ELVLITGPNMAGKSTFLRQTALIALLAQVGSFVPAEEAHLPLFDGIYTRIGASDDLAGGKSTFMVEMEEVALILKEA--T 113 (224)
T ss_dssp CEEEEESCSSSSHHHHHHHHHHHHHHHTTTCCBSSSEEEECCCSEEEEECCC------CCSHHHHHHHHHHHHHHHC--C
T ss_pred CEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEECCCEEEEECCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCC--C
T ss_conf 67999788734532345565899999852504613751994011699998777602378307898678898775028--9
Q ss_pred CCEEEEECCCH
Q ss_conf 99179993521
Q 000823 1029 APSVIFVDEVD 1039 (1267)
Q Consensus 1029 ~PsIIiIDEID 1039 (1267)
..++++|||+-
T Consensus 114 ~~sLvliDE~~ 124 (224)
T d1ewqa2 114 ENSLVLLDEVG 124 (224)
T ss_dssp TTEEEEEESTT
T ss_pred CCCEEEECCCC
T ss_conf 77278554545
No 178
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast (Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Probab=85.22 E-value=0.49 Score=21.58 Aligned_cols=25 Identities=28% Similarity=0.392 Sum_probs=20.6
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHHH
Q ss_conf 8982499995899839999999999
Q 000823 968 KPCKGILLFGPPGTGKTMLAKAVAT 992 (1267)
Q Consensus 968 kP~~gILL~GPpGTGKT~LAkAIA~ 992 (1267)
+.-..+++.|++|+|||+|...+..
T Consensus 15 ~k~~KI~lvG~~~vGKTsLi~~l~~ 39 (182)
T d1moza_ 15 NKELRILILGLDGAGKTTILYRLQI 39 (182)
T ss_dssp SSCEEEEEEEETTSSHHHHHHHTCC
T ss_pred CCEEEEEEECCCCCCHHHHHHHHHC
T ss_conf 9668999999999988999988733
No 179
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Probab=85.17 E-value=0.77 Score=20.09 Aligned_cols=23 Identities=30% Similarity=0.497 Sum_probs=20.1
Q ss_pred CEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 24999958998399999999999
Q 000823 971 KGILLFGPPGTGKTMLAKAVATE 993 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkAIA~e 993 (1267)
-.|++.|++|+|||+|+..+...
T Consensus 7 ~KI~vvG~~~vGKSSli~~~~~~ 29 (174)
T d1wmsa_ 7 FKVILLGDGGVGKSSLMNRYVTN 29 (174)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHS
T ss_pred EEEEEECCCCCCHHHHHHHHHHC
T ss_conf 79999999997999999999849
No 180
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens), isoenzyme 6 [TaxId: 9606]}
Probab=85.14 E-value=0.29 Score=23.27 Aligned_cols=33 Identities=36% Similarity=0.503 Sum_probs=28.6
Q ss_pred CCCEEEECCCCCHHHHHHHHHHHHHHHCCEEEEEE
Q ss_conf 99136406897058899999999857199099983
Q 000823 466 NPRILLSGPAGSEIYQEMLAKALAHYFGAKLLIFD 500 (1267)
Q Consensus 466 s~rILLsgp~GsE~Yqe~LaKALA~~f~a~LL~lD 500 (1267)
=+.|+|.|||| .++.++|++||+.++.+++..|
T Consensus 4 ~~~I~i~G~pG--sGKTTia~~La~~l~~~~i~~~ 36 (173)
T d1rkba_ 4 LPNILLTGTPG--VGKTTLGKELASKSGLKYINVG 36 (173)
T ss_dssp CCCEEEECSTT--SSHHHHHHHHHHHHCCEEEEHH
T ss_pred CCEEEEECCCC--CCHHHHHHHHHHHHCCCEEECH
T ss_conf 89798989999--9989999999999799589516
No 181
>d2i1qa2 c.37.1.11 (A:65-322) DNA repair protein Rad51, catalytic domain {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=85.02 E-value=0.36 Score=22.56 Aligned_cols=26 Identities=19% Similarity=0.171 Sum_probs=22.5
Q ss_pred CCCEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 98249999589983999999999991
Q 000823 969 PCKGILLFGPPGTGKTMLAKAVATEA 994 (1267)
Q Consensus 969 P~~gILL~GPpGTGKT~LAkAIA~el 994 (1267)
+..-++|.|+||+|||.++..+|..+
T Consensus 33 ~G~l~~i~G~~G~GKT~~~l~~a~~~ 58 (258)
T d2i1qa2 33 SQSVTEFAGVFGSGKTQIMHQSCVNL 58 (258)
T ss_dssp TTEEEEEEESTTSSHHHHHHHHHHHT
T ss_pred CCEEEEEEECCCCCHHHHHHHHHHHH
T ss_conf 88599999179999899999999999
No 182
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin (Saguinus oedipus) [TaxId: 9490]}
Probab=84.52 E-value=0.82 Score=19.89 Aligned_cols=25 Identities=20% Similarity=0.430 Sum_probs=21.2
Q ss_pred CCCEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 9824999958998399999999999
Q 000823 969 PCKGILLFGPPGTGKTMLAKAVATE 993 (1267)
Q Consensus 969 P~~gILL~GPpGTGKT~LAkAIA~e 993 (1267)
|..-+++.|.+|+|||+|+..+...
T Consensus 3 ~~~KivlvG~~~vGKTsli~~~~~~ 27 (168)
T d1u8za_ 3 ALHKVIMVGSGGVGKSALTLQFMYD 27 (168)
T ss_dssp CEEEEEEECSTTSSHHHHHHHHHHS
T ss_pred CEEEEEEECCCCCCHHHHHHHHHHC
T ss_conf 5269999998995889999999729
No 183
>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor beta-subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=84.30 E-value=0.84 Score=19.82 Aligned_cols=23 Identities=35% Similarity=0.651 Sum_probs=20.9
Q ss_pred EEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 49999589983999999999991
Q 000823 972 GILLFGPPGTGKTMLAKAVATEA 994 (1267)
Q Consensus 972 gILL~GPpGTGKT~LAkAIA~el 994 (1267)
.|+|.|+||+|||+|..++...-
T Consensus 5 ~V~lvG~~n~GKTSLln~l~~~~ 27 (209)
T d1nrjb_ 5 SIIIAGPQNSGKTSLLTLLTTDS 27 (209)
T ss_dssp EEEEECSTTSSHHHHHHHHHHSS
T ss_pred EEEEECCCCCCHHHHHHHHHCCC
T ss_conf 99999999988999999996799
No 184
>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=84.00 E-value=0.35 Score=22.63 Aligned_cols=33 Identities=30% Similarity=0.456 Sum_probs=29.4
Q ss_pred CCCEEEECCCCCHHHHHHHHHHHHHHHCCEEEEEE
Q ss_conf 99136406897058899999999857199099983
Q 000823 466 NPRILLSGPAGSEIYQEMLAKALAHYFGAKLLIFD 500 (1267)
Q Consensus 466 s~rILLsgp~GsE~Yqe~LaKALA~~f~a~LL~lD 500 (1267)
.|+|.|-||+| .++.+++|+||+.++.+++-+|
T Consensus 1 ~p~IvliG~~G--~GKSTig~~La~~l~~~fiD~D 33 (165)
T d2iyva1 1 APKAVLVGLPG--SGKSTIGRRLAKALGVGLLDTD 33 (165)
T ss_dssp CCSEEEECSTT--SSHHHHHHHHHHHHTCCEEEHH
T ss_pred CCCEEEECCCC--CCHHHHHHHHHHHHCCCEEEEC
T ss_conf 99489988999--9889999999998499869602
No 185
>d1gsia_ c.37.1.1 (A:) Thymidylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=83.99 E-value=0.86 Score=19.73 Aligned_cols=32 Identities=22% Similarity=0.407 Sum_probs=26.3
Q ss_pred EEEECCCCCHHHHHHHHHHHHH---CCCEEEEECC
Q ss_conf 9999589983999999999991---9956996111
Q 000823 973 ILLFGPPGTGKTMLAKAVATEA---GANFINISMS 1004 (1267)
Q Consensus 973 ILL~GPpGTGKT~LAkAIA~el---g~~vi~Id~s 1004 (1267)
|.|.|+.|+|||++++.|+..+ |.+++.+.-+
T Consensus 3 I~ieG~dGsGKST~~~~L~~~l~~~g~~v~~~~~P 37 (208)
T d1gsia_ 3 IAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFP 37 (208)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESS
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECC
T ss_conf 99989987899999999999998789978998659
No 186
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Probab=83.76 E-value=0.88 Score=19.67 Aligned_cols=22 Identities=27% Similarity=0.528 Sum_probs=19.9
Q ss_pred EEEEECCCCCHHHHHHHHHHHH
Q ss_conf 4999958998399999999999
Q 000823 972 GILLFGPPGTGKTMLAKAVATE 993 (1267)
Q Consensus 972 gILL~GPpGTGKT~LAkAIA~e 993 (1267)
.|++.|.+|+|||+|...+...
T Consensus 5 Ki~lvG~~~vGKTsLi~r~~~~ 26 (167)
T d1kaoa_ 5 KVVVLGSGGVGKSALTVQFVTG 26 (167)
T ss_dssp EEEEECCTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHHC
T ss_conf 9999998993999999999719
No 187
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=83.55 E-value=0.29 Score=23.26 Aligned_cols=35 Identities=34% Similarity=0.421 Sum_probs=30.4
Q ss_pred CCEEEECCCCCHHHHHHHHHHHHHHHCCEEEEEECCC
Q ss_conf 9136406897058899999999857199099983456
Q 000823 467 PRILLSGPAGSEIYQEMLAKALAHYFGAKLLIFDSHS 503 (1267)
Q Consensus 467 ~rILLsgp~GsE~Yqe~LaKALA~~f~a~LL~lD~~~ 503 (1267)
+=|+|.||+| .++.++|++||+.++.+.+.+|.-.
T Consensus 5 ~iI~l~G~~G--sGKSTia~~La~~lg~~~~~~~~d~ 39 (176)
T d1zp6a1 5 NILLLSGHPG--SGKSTIAEALANLPGVPKVHFHSDD 39 (176)
T ss_dssp EEEEEEECTT--SCHHHHHHHHHTCSSSCEEEECTTH
T ss_pred EEEEEECCCC--CCHHHHHHHHHHHHCCCEEEECHHH
T ss_conf 5999988999--9889999999999599979906899
No 188
>d1vhta_ c.37.1.1 (A:) Dephospho-CoA kinase {Escherichia coli [TaxId: 562]}
Probab=83.48 E-value=0.5 Score=21.50 Aligned_cols=30 Identities=37% Similarity=0.527 Sum_probs=24.2
Q ss_pred EEEEECCCCCHHHHHHHHHHHHHCCCEEEEE
Q ss_conf 4999958998399999999999199569961
Q 000823 972 GILLFGPPGTGKTMLAKAVATEAGANFINIS 1002 (1267)
Q Consensus 972 gILL~GPpGTGKT~LAkAIA~elg~~vi~Id 1002 (1267)
-|-|+|.+|+|||++++.+. .+|++++..|
T Consensus 5 iIgitG~igSGKStv~~~l~-~~G~~vidaD 34 (208)
T d1vhta_ 5 IVALTGGIGSGKSTVANAFA-DLGINVIDAD 34 (208)
T ss_dssp EEEEECCTTSCHHHHHHHHH-HTTCEEEEHH
T ss_pred EEEEECCCCCCHHHHHHHHH-HCCCCEEECH
T ss_conf 99978988688999999999-8799199743
No 189
>d1jjva_ c.37.1.1 (A:) Dephospho-CoA kinase {Haemophilus influenzae [TaxId: 727]}
Probab=82.79 E-value=0.48 Score=21.63 Aligned_cols=29 Identities=28% Similarity=0.489 Sum_probs=24.3
Q ss_pred EEEECCCCCHHHHHHHHHHHHHCCCEEEEE
Q ss_conf 999958998399999999999199569961
Q 000823 973 ILLFGPPGTGKTMLAKAVATEAGANFINIS 1002 (1267)
Q Consensus 973 ILL~GPpGTGKT~LAkAIA~elg~~vi~Id 1002 (1267)
|-|+|+.|+|||++|+.+. +.|++++..|
T Consensus 5 IgITG~igSGKStv~~~l~-~~G~~vidaD 33 (205)
T d1jjva_ 5 VGLTGGIGSGKTTIANLFT-DLGVPLVDAD 33 (205)
T ss_dssp EEEECSTTSCHHHHHHHHH-TTTCCEEEHH
T ss_pred EEEECCCCCCHHHHHHHHH-HCCCEEEECH
T ss_conf 9988888788999999999-8799399746
No 190
>d2bmfa2 c.37.1.14 (A:178-482) Dengue virus helicase {Dengue virus type 2 [TaxId: 11060]}
Probab=82.64 E-value=0.86 Score=19.74 Aligned_cols=35 Identities=14% Similarity=0.247 Sum_probs=17.2
Q ss_pred CCCCCEEEECCCC---CHHHHHHHHHHHHHHHCCEEEEE
Q ss_conf 6899136406897---05889999999985719909998
Q 000823 464 TVNPRILLSGPAG---SEIYQEMLAKALAHYFGAKLLIF 499 (1267)
Q Consensus 464 ~~s~rILLsgp~G---sE~Yqe~LaKALA~~f~a~LL~l 499 (1267)
-..+-+|+++|.| |..|...++++... -+.+.|++
T Consensus 7 ~~~~~~lv~~~TGsGKT~~~l~~~~~~~~~-~~~~~lvi 44 (305)
T d2bmfa2 7 RKKRLTIMDLHPGAGKTKRYLPAIVREAIK-RGLRTLIL 44 (305)
T ss_dssp STTCEEEECCCTTSSTTTTHHHHHHHHHHH-HTCCEEEE
T ss_pred HCCCCEEEEECCCCCHHHHHHHHHHHHHHH-CCCEEEEE
T ss_conf 469949999799997879999999999872-69989998
No 191
>d1s2ma1 c.37.1.19 (A:46-251) Putative ATP-dependent RNA helicase DHH1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=82.52 E-value=0.97 Score=19.33 Aligned_cols=52 Identities=23% Similarity=0.250 Sum_probs=25.9
Q ss_pred CCHHCCCCHHHHHHHHHHHHCCCCCHHHHHCCCC--CCCCCEEEEECCCCCHHHHHH
Q ss_conf 6100014099999999998572576256630898--889824999958998399999
Q 000823 933 TFDDIGALENVKDTLKELVMLPLQRPELFCKGQL--TKPCKGILLFGPPGTGKTMLA 987 (1267)
Q Consensus 933 t~ddI~Gle~vk~~L~e~I~~pl~~~e~f~k~~~--~kP~~gILL~GPpGTGKT~LA 987 (1267)
+|++++-...+.+.|.+.= ...+....+..+ ....+.+++..|+|+|||+.-
T Consensus 2 sF~~l~L~~~l~~~L~~~g---~~~pt~iQ~~aip~il~g~dvi~~a~tGsGKTlay 55 (206)
T d1s2ma1 2 TFEDFYLKRELLMGIFEAG---FEKPSPIQEEAIPVAITGRDILARAKNGTGKTAAF 55 (206)
T ss_dssp CGGGGCCCHHHHHHHHHTT---CCSCCHHHHHHHHHHHHTCCEEEECCTTSCHHHHH
T ss_pred CHHHCCCCHHHHHHHHHCC---CCCCCHHHHHHHHHHHCCCCEEEECCCCCHHHHHH
T ss_conf 8677698999999999879---99999999999999986998898658762144443
No 192
>d1ihua1 c.37.1.10 (A:1-296) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}
Probab=82.29 E-value=0.99 Score=19.27 Aligned_cols=35 Identities=26% Similarity=0.304 Sum_probs=25.4
Q ss_pred CCCEEEEECCCCCHHHHHHHHHHHHH---CCCEEEEEC
Q ss_conf 98249999589983999999999991---995699611
Q 000823 969 PCKGILLFGPPGTGKTMLAKAVATEA---GANFINISM 1003 (1267)
Q Consensus 969 P~~gILL~GPpGTGKT~LAkAIA~el---g~~vi~Id~ 1003 (1267)
+++-+++.|.=|+|||+++.++|..+ |..+.-+++
T Consensus 7 ~p~~i~~sGKGGVGKTTvaa~lA~~lA~~G~rVLlvD~ 44 (296)
T d1ihua1 7 IPPYLFFTGKGGVGKTSISCATAIRLAEQGKRVLLVST 44 (296)
T ss_dssp CCSEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEC
T ss_conf 98599997998674999999999999978997899957
No 193
>d2vp4a1 c.37.1.1 (A:12-208) Deoxyribonucleoside kinase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=81.90 E-value=0.43 Score=21.96 Aligned_cols=31 Identities=19% Similarity=0.178 Sum_probs=25.7
Q ss_pred CCCEEEEECCCCCHHHHHHHHHHHHHCCCEE
Q ss_conf 9824999958998399999999999199569
Q 000823 969 PCKGILLFGPPGTGKTMLAKAVATEAGANFI 999 (1267)
Q Consensus 969 P~~gILL~GPpGTGKT~LAkAIA~elg~~vi 999 (1267)
.+.-|.|.|+.|+|||++++.|++.++...+
T Consensus 8 kp~~I~ieG~~GsGKTTl~~~L~~~l~~~~~ 38 (197)
T d2vp4a1 8 QPFTVLIEGNIGSGKTTYLNHFEKYKNDICL 38 (197)
T ss_dssp CCEEEEEECSTTSCHHHHHHTTGGGTTTEEE
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHCCCEE
T ss_conf 8619998899998889999999987078678
No 194
>d2qm8a1 c.37.1.10 (A:5-327) Metallochaperone MeaB {Methylobacterium extorquens [TaxId: 408]}
Probab=81.90 E-value=1 Score=19.17 Aligned_cols=37 Identities=22% Similarity=0.301 Sum_probs=28.3
Q ss_pred CCEEEEECCCCCHHHHHHHHHHHHH-----CCCEEEEECCCC
Q ss_conf 8249999589983999999999991-----995699611100
Q 000823 970 CKGILLFGPPGTGKTMLAKAVATEA-----GANFINISMSSI 1006 (1267)
Q Consensus 970 ~~gILL~GPpGTGKT~LAkAIA~el-----g~~vi~Id~seL 1006 (1267)
...|=|.||||+|||+|..+++..+ ..-++.+|.+.-
T Consensus 51 ~~~igitG~pGaGKSTli~~l~~~~~~~g~~vaViavDpss~ 92 (323)
T d2qm8a1 51 AIRVGITGVPGVGKSTTIDALGSLLTAAGHKVAVLAVDPSST 92 (323)
T ss_dssp SEEEEEECCTTSCHHHHHHHHHHHHHHTTCCEEEEEECGGGG
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCH
T ss_conf 159861179988899999999998763687513443465547
No 195
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli [TaxId: 562]}
Probab=81.55 E-value=0.43 Score=21.95 Aligned_cols=33 Identities=24% Similarity=0.402 Sum_probs=28.4
Q ss_pred CCEEEECCCCCHHHHHHHHHHHHHHHCCEEEEEEC
Q ss_conf 91364068970588999999998571990999834
Q 000823 467 PRILLSGPAGSEIYQEMLAKALAHYFGAKLLIFDS 501 (1267)
Q Consensus 467 ~rILLsgp~GsE~Yqe~LaKALA~~f~a~LL~lD~ 501 (1267)
+-|.|.||+| .++.++||+||+.++.+++-.|.
T Consensus 3 k~I~l~G~~G--sGKSTvak~La~~L~~~~id~~~ 35 (169)
T d1kaga_ 3 RNIFLVGPMG--AGKSTIGRQLAQQLNMEFYDSDQ 35 (169)
T ss_dssp CCEEEECCTT--SCHHHHHHHHHHHTTCEEEEHHH
T ss_pred CEEEEECCCC--CCHHHHHHHHHHHHCCCEEEECH
T ss_conf 7499989999--99999999999996999695005
No 196
>d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=81.37 E-value=1.1 Score=19.04 Aligned_cols=34 Identities=24% Similarity=0.364 Sum_probs=23.7
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHH------CCCEEEEECC
Q ss_conf 249999589983999999999991------9956996111
Q 000823 971 KGILLFGPPGTGKTMLAKAVATEA------GANFINISMS 1004 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkAIA~el------g~~vi~Id~s 1004 (1267)
-.++|.|.+|+|||+|...+.-.- |+.+..++..
T Consensus 3 iKivllG~~~vGKTsll~r~~f~~~~~pTiG~~~~~~~~~ 42 (200)
T d1zcba2 3 VKILLLGAGESGKSTFLKQMRIIHGQDPTKGIHEYDFEIK 42 (200)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHHSCCCCSSEEEEEEEET
T ss_pred EEEEEECCCCCCHHHHHHHHHCCCCCCCEEEEEEEEEEEE
T ss_conf 8999998999998999998846898887241499999601
No 197
>d2ocpa1 c.37.1.1 (A:37-277) Deoxyguanosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=81.20 E-value=1.1 Score=19.00 Aligned_cols=30 Identities=13% Similarity=0.164 Sum_probs=25.6
Q ss_pred CCEEEEECCCCCHHHHHHHHHHHHHCCCEE
Q ss_conf 824999958998399999999999199569
Q 000823 970 CKGILLFGPPGTGKTMLAKAVATEAGANFI 999 (1267)
Q Consensus 970 ~~gILL~GPpGTGKT~LAkAIA~elg~~vi 999 (1267)
|+-|.|.|+-|+|||++++.|+..+....+
T Consensus 2 pk~IviEG~~GsGKST~~~~L~~~l~~~~i 31 (241)
T d2ocpa1 2 PRRLSIEGNIAVGKSTFVKLLTKTYPEWHV 31 (241)
T ss_dssp CEEEEEEECTTSSHHHHHHHHHHHCTTSEE
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHCCC
T ss_conf 819999899888599999999998730387
No 198
>d1q0ua_ c.37.1.19 (A:) Probable DEAD box RNA helicase YqfR {Bacillus stearothermophilus [TaxId: 1422]}
Probab=80.37 E-value=1.1 Score=18.80 Aligned_cols=16 Identities=31% Similarity=0.378 Sum_probs=14.1
Q ss_pred CEEEEECCCCCHHHHH
Q ss_conf 2499995899839999
Q 000823 971 KGILLFGPPGTGKTML 986 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~L 986 (1267)
+.+++..|+|+|||..
T Consensus 39 ~dvii~a~TGSGKTla 54 (209)
T d1q0ua_ 39 ESMVGQSQTGTGKTHA 54 (209)
T ss_dssp CCEEEECCSSHHHHHH
T ss_pred CCEEEECCCCCCCCEE
T ss_conf 9768662444213314
No 199
>d1a7ja_ c.37.1.6 (A:) Phosphoribulokinase {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=80.19 E-value=0.64 Score=20.70 Aligned_cols=35 Identities=17% Similarity=0.279 Sum_probs=18.0
Q ss_pred EEEEECCCCCHHHHHHHHHHHHH---CCCEEEEECCCC
Q ss_conf 49999589983999999999991---995699611100
Q 000823 972 GILLFGPPGTGKTMLAKAVATEA---GANFINISMSSI 1006 (1267)
Q Consensus 972 gILL~GPpGTGKT~LAkAIA~el---g~~vi~Id~seL 1006 (1267)
=|-+.|++|+|||++++++++.+ +.....+.+-++
T Consensus 6 IIgIaG~SGSGKTTva~~l~~i~~~~~v~~~iI~~Dsf 43 (288)
T d1a7ja_ 6 IISVTGSSGAGTSTVKHTFDQIFRREGVKAVSIEGDAF 43 (288)
T ss_dssp EEEEESCC---CCTHHHHHHHHHHHHTCCEEEEEGGGG
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCC
T ss_conf 99998999780999999999997156997699947778
No 200
>d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni [TaxId: 197]}
Probab=79.75 E-value=0.59 Score=20.96 Aligned_cols=33 Identities=30% Similarity=0.263 Sum_probs=29.2
Q ss_pred CCEEEECCCCCHHHHHHHHHHHHHHHCCEEEEEEC
Q ss_conf 91364068970588999999998571990999834
Q 000823 467 PRILLSGPAGSEIYQEMLAKALAHYFGAKLLIFDS 501 (1267)
Q Consensus 467 ~rILLsgp~GsE~Yqe~LaKALA~~f~a~LL~lD~ 501 (1267)
+.|.|.|||| .++.+++|+||+.++.+++-+|.
T Consensus 1 k~I~liG~~G--sGKsTi~k~La~~l~~~~~d~d~ 33 (161)
T d1viaa_ 1 KNIVFIGFMG--SGKSTLARALAKDLDLVFLDSDF 33 (161)
T ss_dssp CCEEEECCTT--SCHHHHHHHHHHHHTCEEEEHHH
T ss_pred CCEEEECCCC--CCHHHHHHHHHHHHCCCEEECCC
T ss_conf 9399989999--98899999999983998783673
No 201
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo sapiens), ARL5A [TaxId: 9606]}
Probab=79.75 E-value=1.2 Score=18.66 Aligned_cols=23 Identities=17% Similarity=0.369 Sum_probs=20.5
Q ss_pred CEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 24999958998399999999999
Q 000823 971 KGILLFGPPGTGKTMLAKAVATE 993 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkAIA~e 993 (1267)
..|++.|.+|+|||+|..++...
T Consensus 16 ~kI~vvG~~~~GKSsLi~rl~~~ 38 (177)
T d1zj6a1 16 HKVIIVGLDNAGKTTILYQFSMN 38 (177)
T ss_dssp EEEEEEESTTSSHHHHHHHHHTT
T ss_pred EEEEEECCCCCCHHHHHHHHHCC
T ss_conf 79999999998989999999668
No 202
>d1tmka_ c.37.1.1 (A:) Thymidylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=79.55 E-value=1.2 Score=18.62 Aligned_cols=33 Identities=27% Similarity=0.232 Sum_probs=27.4
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEC
Q ss_conf 249999589983999999999991995699611
Q 000823 971 KGILLFGPPGTGKTMLAKAVATEAGANFINISM 1003 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkAIA~elg~~vi~Id~ 1003 (1267)
+=|.|.|+-|+|||++++.|+..+......+.-
T Consensus 4 k~I~iEG~DGsGKST~~~~L~~~L~~~~~~~~~ 36 (214)
T d1tmka_ 4 KLILIEGLDRTGKTTQCNILYKKLQPNCKLLKF 36 (214)
T ss_dssp CEEEEEESTTSSHHHHHHHHHHHTTTSEEEEES
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHCCEEEEE
T ss_conf 899998998886999999999999719779997
No 203
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=79.10 E-value=0.88 Score=19.64 Aligned_cols=22 Identities=27% Similarity=0.505 Sum_probs=19.8
Q ss_pred EEEEECCCCCHHHHHHHHHHHH
Q ss_conf 4999958998399999999999
Q 000823 972 GILLFGPPGTGKTMLAKAVATE 993 (1267)
Q Consensus 972 gILL~GPpGTGKT~LAkAIA~e 993 (1267)
.++|.|+||+|||+|...+...
T Consensus 2 KI~liG~~nvGKSSLln~l~~~ 23 (166)
T d2qtvb1 2 KLLFLGLDNAGKTTLLHMLKND 23 (166)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHCC
T ss_conf 8999999999999999999589
No 204
>d1u0la2 c.37.1.8 (A:69-293) Probable GTPase EngC (YjeQ), C-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=79.09 E-value=0.95 Score=19.41 Aligned_cols=32 Identities=25% Similarity=0.280 Sum_probs=24.4
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHHCCCEEEEE
Q ss_conf 24999958998399999999999199569961
Q 000823 971 KGILLFGPPGTGKTMLAKAVATEAGANFINIS 1002 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkAIA~elg~~vi~Id 1002 (1267)
+...|.|++|+||++|..+|........-.++
T Consensus 96 kt~~~~G~SGVGKSTLiN~L~~~~~~~T~~vs 127 (225)
T d1u0la2 96 KISTMAGLSGVGKSSLLNAINPGLKLRVSEVS 127 (225)
T ss_dssp SEEEEECSTTSSHHHHHHHHSTTCCCC-----
T ss_pred CEEEEECCCCCCHHHHHHHHCCHHHHHCCCCC
T ss_conf 80899788987788887730535550106842
No 205
>d4tmka_ c.37.1.1 (A:) Thymidylate kinase {Escherichia coli [TaxId: 562]}
Probab=78.55 E-value=0.83 Score=19.83 Aligned_cols=31 Identities=29% Similarity=0.331 Sum_probs=24.2
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHH---CCCEEEE
Q ss_conf 249999589983999999999991---9956996
Q 000823 971 KGILLFGPPGTGKTMLAKAVATEA---GANFINI 1001 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkAIA~el---g~~vi~I 1001 (1267)
+=|.|.|+.|+|||++++.|+..+ |...+.+
T Consensus 3 kfIviEG~dGsGKsT~~~~L~~~L~~~g~~~~~~ 36 (210)
T d4tmka_ 3 KYIVIEGLEGAGKTTARNVVVETLEQLGIRDMVF 36 (210)
T ss_dssp CEEEEEECTTSCHHHHHHHHHHHHHHTTCCCEEE
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEE
T ss_conf 7899989988879999999999999679973998
No 206
>d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance regulator, CFTR, nucleotide-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=78.38 E-value=0.96 Score=19.37 Aligned_cols=26 Identities=27% Similarity=0.345 Sum_probs=22.4
Q ss_pred CCCEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 98249999589983999999999991
Q 000823 969 PCKGILLFGPPGTGKTMLAKAVATEA 994 (1267)
Q Consensus 969 P~~gILL~GPpGTGKT~LAkAIA~el 994 (1267)
+..-+-|.||.|+|||+|++.|+..+
T Consensus 61 ~Ge~vaivG~nGsGKSTLl~~i~Gl~ 86 (281)
T d1r0wa_ 61 KGEMLAITGSTGSGKTSLLMLILGEL 86 (281)
T ss_dssp TTCEEEEEESTTSSHHHHHHHHHTSS
T ss_pred CCCEEEEECCCCCHHHHHHHHHHCCC
T ss_conf 99999999899982999999995797
No 207
>d1veca_ c.37.1.19 (A:) DEAD box RNA helicase rck/p54 {Human (Homo sapiens) [TaxId: 9606]}
Probab=78.36 E-value=1.3 Score=18.37 Aligned_cols=16 Identities=38% Similarity=0.441 Sum_probs=13.7
Q ss_pred CEEEEECCCCCHHHHH
Q ss_conf 2499995899839999
Q 000823 971 KGILLFGPPGTGKTML 986 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~L 986 (1267)
+.+++..|+|+|||+.
T Consensus 41 ~dvl~~a~TGsGKTla 56 (206)
T d1veca_ 41 RDILARAKNGTGKSGA 56 (206)
T ss_dssp CCEEEECCSSSTTHHH
T ss_pred CCEEEECCCCCCCCCC
T ss_conf 9887443674001121
No 208
>d1qdea_ c.37.1.19 (A:) Initiation factor 4a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=78.13 E-value=1.3 Score=18.32 Aligned_cols=58 Identities=21% Similarity=0.180 Sum_probs=34.2
Q ss_pred CCCCCCCCHHCCCCHHHHHHHHHHHHCCCCCHHHHHCCCC--CCCCCEEEEECCCCCHHHHHH
Q ss_conf 9998756100014099999999998572576256630898--889824999958998399999
Q 000823 927 PSDIGVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQL--TKPCKGILLFGPPGTGKTMLA 987 (1267)
Q Consensus 927 ~~~~~vt~ddI~Gle~vk~~L~e~I~~pl~~~e~f~k~~~--~kP~~gILL~GPpGTGKT~LA 987 (1267)
++++-.+|++++-.+++.+.|.+.-.. .+....+..+ ....+.+++..|+|+|||...
T Consensus 5 ~~~~~~sF~~l~l~~~l~~~L~~~g~~---~pt~iQ~~aip~il~g~dvl~~a~TGsGKT~a~ 64 (212)
T d1qdea_ 5 YDKVVYKFDDMELDENLLRGVFGYGFE---EPSAIQQRAIMPIIEGHDVLAQAQSGTGKTGTF 64 (212)
T ss_dssp CCCCCCCGGGGTCCHHHHHHHHHHTCC---SCCHHHHHHHHHHHTTCCEEEECCTTSSHHHHH
T ss_pred CCCCCCCHHHCCCCHHHHHHHHHCCCC---CCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHH
T ss_conf 865126954489799999999987999---999999999999986998774456530100466
No 209
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId: 562]}
Probab=78.10 E-value=0.75 Score=20.20 Aligned_cols=34 Identities=26% Similarity=0.231 Sum_probs=29.0
Q ss_pred CCCEEEECCCCCHHHHHHHHHHHHHHHCCEEEEEEC
Q ss_conf 991364068970588999999998571990999834
Q 000823 466 NPRILLSGPAGSEIYQEMLAKALAHYFGAKLLIFDS 501 (1267)
Q Consensus 466 s~rILLsgp~GsE~Yqe~LaKALA~~f~a~LL~lD~ 501 (1267)
.+-|+|.||+| .++.++||+||+.++++.+..|.
T Consensus 6 ~~iivl~G~~G--sGKsT~a~~La~~l~~~~~~~d~ 39 (171)
T d1knqa_ 6 HHIYVLMGVSG--SGKSAVASEVAHQLHAAFLDGDF 39 (171)
T ss_dssp SEEEEEECSTT--SCHHHHHHHHHHHHTCEEEEGGG
T ss_pred CEEEEEECCCC--CCHHHHHHHHHHHHCCCEECHHH
T ss_conf 71899989999--89899999999986978310366
No 210
>d2gnoa2 c.37.1.20 (A:11-208) gamma subunit of DNA polymerase III, N-domain {Thermotoga maritima [TaxId: 2336]}
Probab=78.05 E-value=1.3 Score=18.32 Aligned_cols=58 Identities=14% Similarity=0.178 Sum_probs=41.1
Q ss_pred HHHHHHHHHHHHC-CCCCEEEEECCHHHHHCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCC
Q ss_conf 9999999986301-479849997250434138942256789987219994899941035788
Q 000823 676 LINTLFEVVFSES-RSCPFILFMKDAEKSIAGNSDSYSTFKSRLEKLPDKVIVIGSHTHTDN 736 (1267)
Q Consensus 676 ~i~~L~ev~~~~~-~~~p~Ilfi~di~~~l~g~~~~~~~lk~~L~~l~g~vvvIGs~~~~d~ 736 (1267)
.|+.|.+.+..-+ ..+.=|++|+|+|.+ +.++.+.|...||--++++++|-.++..+.
T Consensus 63 ~IR~i~~~~~~~~~~~~~KviIId~ad~l---~~~aqNaLLK~LEEPp~~t~fiLit~~~~~ 121 (198)
T d2gnoa2 63 DIRTIKDFLNYSPELYTRKYVIVHDCERM---TQQAANAFLKALEEPPEYAVIVLNTRRWHY 121 (198)
T ss_dssp HHHHHHHHHTSCCSSSSSEEEEETTGGGB---CHHHHHHTHHHHHSCCTTEEEEEEESCGGG
T ss_pred HHHHHHHHHHHCCCCCCCEEEEEECCCCC---CHHHHHHHHHHHHCCCCCCEEEECCCCHHH
T ss_conf 99999999961754589879999473103---666664788877378988522220699566
No 211
>d3b60a1 c.37.1.12 (A:329-581) Multidrug resistance ABC transporter MsbA, C-terminal domain {Salmonella typhimurium [TaxId: 90371]}
Probab=77.91 E-value=0.79 Score=19.99 Aligned_cols=26 Identities=27% Similarity=0.422 Sum_probs=19.9
Q ss_pred CCCEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 98249999589983999999999991
Q 000823 969 PCKGILLFGPPGTGKTMLAKAVATEA 994 (1267)
Q Consensus 969 P~~gILL~GPpGTGKT~LAkAIA~el 994 (1267)
+...+-|.||+|+|||+|++.|+...
T Consensus 40 ~Ge~iaivG~sGsGKSTLl~ll~gl~ 65 (253)
T d3b60a1 40 AGKTVALVGRSGSGKSTIASLITRFY 65 (253)
T ss_dssp TTCEEEEEECTTSSHHHHHHHHTTTT
T ss_pred CCCEEEEECCCCCHHHHHHHHHHCCC
T ss_conf 99999999999985999999986216
No 212
>d1deka_ c.37.1.1 (A:) Deoxynucleoside monophosphate kinase {Bacteriophage T4 [TaxId: 10665]}
Probab=77.74 E-value=0.8 Score=19.96 Aligned_cols=32 Identities=25% Similarity=0.279 Sum_probs=25.2
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECC
Q ss_conf 2499995899839999999999919956996111
Q 000823 971 KGILLFGPPGTGKTMLAKAVATEAGANFINISMS 1004 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkAIA~elg~~vi~Id~s 1004 (1267)
.-|-|+|+.|+||+++|+.++...|+. .++++
T Consensus 2 ~iIgiTG~igSGKsTva~~l~e~~g~~--~i~~a 33 (241)
T d1deka_ 2 KLIFLSGVKRSGKDTTADFIMSNYSAV--KYQLA 33 (241)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHHSCEE--ECCTT
T ss_pred EEEEEECCCCCCHHHHHHHHHHHCCCE--EECCC
T ss_conf 899997999988999999999868985--98052
No 213
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=77.69 E-value=0.93 Score=19.47 Aligned_cols=22 Identities=23% Similarity=0.407 Sum_probs=19.6
Q ss_pred CEEEEECCCCCHHHHHHHHHHH
Q ss_conf 2499995899839999999999
Q 000823 971 KGILLFGPPGTGKTMLAKAVAT 992 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkAIA~ 992 (1267)
..|+|.|++|+|||+|..++..
T Consensus 14 ~kI~lvG~~~vGKTsLl~~l~~ 35 (186)
T d1f6ba_ 14 GKLVFLGLDNAGKTTLLHMLKD 35 (186)
T ss_dssp EEEEEEEETTSSHHHHHHHHSC
T ss_pred CEEEEECCCCCCHHHHHHHHHC
T ss_conf 7899999999898999999967
No 214
>d1g2912 c.37.1.12 (1:1-240) Maltose transport protein MalK, N-terminal domain {Archaeon Thermococcus litoralis [TaxId: 2265]}
Probab=77.57 E-value=0.87 Score=19.70 Aligned_cols=24 Identities=33% Similarity=0.567 Sum_probs=20.8
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 249999589983999999999991
Q 000823 971 KGILLFGPPGTGKTMLAKAVATEA 994 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkAIA~el 994 (1267)
.-+-|.||.|+|||+|++.++...
T Consensus 30 e~~~liG~sGaGKSTll~~i~gl~ 53 (240)
T d1g2912 30 EFMILLGPSGCGKTTTLRMIAGLE 53 (240)
T ss_dssp CEEEEECSTTSSHHHHHHHHHTSS
T ss_pred CEEEEECCCCCHHHHHHHHHHCCC
T ss_conf 899999999980999999996487
No 215
>d2awna2 c.37.1.12 (A:4-235) Maltose transport protein MalK, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=77.34 E-value=1.2 Score=18.78 Aligned_cols=24 Identities=29% Similarity=0.567 Sum_probs=20.8
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 249999589983999999999991
Q 000823 971 KGILLFGPPGTGKTMLAKAVATEA 994 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkAIA~el 994 (1267)
.-+-|.||.|+|||+|.+.++...
T Consensus 27 ei~~liGpsGsGKSTLl~~i~Gl~ 50 (232)
T d2awna2 27 EFVVFVGPSGCGKSTLLRMIAGLE 50 (232)
T ss_dssp CEEEEECCTTSSHHHHHHHHHTSS
T ss_pred CEEEEECCCCCHHHHHHHHHHCCC
T ss_conf 899999899982999999996587
No 216
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARL1 [TaxId: 9606]}
Probab=77.29 E-value=0.97 Score=19.35 Aligned_cols=23 Identities=30% Similarity=0.473 Sum_probs=20.3
Q ss_pred CEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 24999958998399999999999
Q 000823 971 KGILLFGPPGTGKTMLAKAVATE 993 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkAIA~e 993 (1267)
..++|.|.+|+|||+|.+++...
T Consensus 6 ~kI~ivG~~~vGKSSLi~~~~~~ 28 (169)
T d1upta_ 6 MRILILGLDGAGKTTILYRLQVG 28 (169)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEEECCCCCCHHHHHHHHHCC
T ss_conf 29999999998999999999679
No 217
>d1l2ta_ c.37.1.12 (A:) MJ0796 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=77.26 E-value=0.71 Score=20.35 Aligned_cols=24 Identities=21% Similarity=0.506 Sum_probs=20.5
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 249999589983999999999991
Q 000823 971 KGILLFGPPGTGKTMLAKAVATEA 994 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkAIA~el 994 (1267)
.-+-|.||+|+|||+|.+.++...
T Consensus 32 e~~~iiG~sGsGKSTLl~~i~gl~ 55 (230)
T d1l2ta_ 32 EFVSIMGPSGSGKSTMLNIIGCLD 55 (230)
T ss_dssp CEEEEECSTTSSHHHHHHHHTTSS
T ss_pred CEEEEECCCCCCCCHHHHHCCCCC
T ss_conf 799998899998216557506887
No 218
>d2onka1 c.37.1.12 (A:1-240) Molybdate/tungstate import ATP-binding protein WtpC (ModC) {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=77.12 E-value=0.9 Score=19.58 Aligned_cols=24 Identities=29% Similarity=0.537 Sum_probs=19.7
Q ss_pred EEEEECCCCCHHHHHHHHHHHHHC
Q ss_conf 499995899839999999999919
Q 000823 972 GILLFGPPGTGKTMLAKAVATEAG 995 (1267)
Q Consensus 972 gILL~GPpGTGKT~LAkAIA~elg 995 (1267)
-+-|.||.|+|||+|.+.|+....
T Consensus 26 ~~~liGpnGaGKSTll~~i~Gl~~ 49 (240)
T d2onka1 26 YCVLLGPTGAGKSVFLELIAGIVK 49 (240)
T ss_dssp EEEEECCTTSSHHHHHHHHHTSSC
T ss_pred EEEEECCCCCHHHHHHHHHHCCCC
T ss_conf 999997999809999999973999
No 219
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId: 9606]}
Probab=76.96 E-value=1.4 Score=18.09 Aligned_cols=21 Identities=43% Similarity=0.817 Sum_probs=18.6
Q ss_pred EEEEECCCCCHHHHHHHHHHH
Q ss_conf 499995899839999999999
Q 000823 972 GILLFGPPGTGKTMLAKAVAT 992 (1267)
Q Consensus 972 gILL~GPpGTGKT~LAkAIA~ 992 (1267)
.+++.|++|+|||+|++.+..
T Consensus 3 Ki~lvG~~~vGKTsLi~~~~~ 23 (168)
T d2gjsa1 3 KVLLLGAPGVGKSALARIFGG 23 (168)
T ss_dssp EEEEECCTTSSHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHHC
T ss_conf 999989899399999999818
No 220
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId: 9606]}
Probab=76.76 E-value=1 Score=19.17 Aligned_cols=22 Identities=23% Similarity=0.460 Sum_probs=19.7
Q ss_pred EEEEECCCCCHHHHHHHHHHHH
Q ss_conf 4999958998399999999999
Q 000823 972 GILLFGPPGTGKTMLAKAVATE 993 (1267)
Q Consensus 972 gILL~GPpGTGKT~LAkAIA~e 993 (1267)
.+++.|.+|+|||+|+..+...
T Consensus 6 KivlvG~~~vGKTsli~~~~~~ 27 (166)
T d1z0fa1 6 KYIIIGDMGVGKSCLLHQFTEK 27 (166)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHHC
T ss_conf 9999999994989999999729
No 221
>d1jj7a_ c.37.1.12 (A:) Peptide transporter Tap1, C-terminal ABC domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=76.64 E-value=0.99 Score=19.27 Aligned_cols=26 Identities=31% Similarity=0.483 Sum_probs=21.1
Q ss_pred CCCEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 98249999589983999999999991
Q 000823 969 PCKGILLFGPPGTGKTMLAKAVATEA 994 (1267)
Q Consensus 969 P~~gILL~GPpGTGKT~LAkAIA~el 994 (1267)
+..-+-|.||.|+|||+|++.|+...
T Consensus 39 ~Ge~vaivG~sGsGKSTLl~li~gl~ 64 (251)
T d1jj7a_ 39 PGEVTALVGPNGSGKSTVAALLQNLY 64 (251)
T ss_dssp TTCEEEEECSTTSSHHHHHHHHTTSS
T ss_pred CCCEEEEECCCCCCHHHHHHHHHCCC
T ss_conf 99899999999984999999986143
No 222
>d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia chrysanthemi [TaxId: 556]}
Probab=76.21 E-value=0.95 Score=19.41 Aligned_cols=33 Identities=21% Similarity=0.334 Sum_probs=29.0
Q ss_pred CCCEEEECCCCCHHHHHHHHHHHHHHHCCEEEEEE
Q ss_conf 99136406897058899999999857199099983
Q 000823 466 NPRILLSGPAGSEIYQEMLAKALAHYFGAKLLIFD 500 (1267)
Q Consensus 466 s~rILLsgp~GsE~Yqe~LaKALA~~f~a~LL~lD 500 (1267)
++.|.|.||+| .++.+++|.||+.++.+++-.|
T Consensus 2 ~~~Iil~G~~G--sGKSTia~~LA~~Lg~~~id~D 34 (170)
T d1e6ca_ 2 TEPIFMVGARG--CGMTTVGRELARALGYEFVDTD 34 (170)
T ss_dssp CCCEEEESCTT--SSHHHHHHHHHHHHTCEEEEHH
T ss_pred CCCEEEECCCC--CCHHHHHHHHHHHHCCCEEEHH
T ss_conf 99889988999--9889999999999499878656
No 223
>d1mv5a_ c.37.1.12 (A:) Multidrug resistance ABC transporter LmrA, C-terminal domain {Lactococcus lactis [TaxId: 1358]}
Probab=76.05 E-value=1 Score=19.19 Aligned_cols=24 Identities=25% Similarity=0.332 Sum_probs=12.8
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 249999589983999999999991
Q 000823 971 KGILLFGPPGTGKTMLAKAVATEA 994 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkAIA~el 994 (1267)
.-+-|.||.|+|||+|++.++...
T Consensus 29 e~vaivG~sGsGKSTLl~ll~gl~ 52 (242)
T d1mv5a_ 29 SIIAFAGPSGGGKSTIFSLLERFY 52 (242)
T ss_dssp EEEEEECCTTSSHHHHHHHHTTSS
T ss_pred CEEEEECCCCCCHHHHHHHHHHHH
T ss_conf 999999999997999999999960
No 224
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=75.98 E-value=1.1 Score=18.92 Aligned_cols=22 Identities=32% Similarity=0.440 Sum_probs=19.9
Q ss_pred EEEEECCCCCHHHHHHHHHHHH
Q ss_conf 4999958998399999999999
Q 000823 972 GILLFGPPGTGKTMLAKAVATE 993 (1267)
Q Consensus 972 gILL~GPpGTGKT~LAkAIA~e 993 (1267)
.+++.|++|+|||+|...+...
T Consensus 7 Ki~vvG~~~vGKTsLi~~l~~~ 28 (169)
T d3raba_ 7 KILIIGNSSVGKTSFLFRYADD 28 (169)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHCC
T ss_conf 9999999991989999999739
No 225
>d3dhwc1 c.37.1.12 (C:1-240) Methionine import ATP-binding protein MetN {Escherichia coli [TaxId: 562]}
Probab=75.97 E-value=0.75 Score=20.19 Aligned_cols=24 Identities=25% Similarity=0.353 Sum_probs=20.5
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 249999589983999999999991
Q 000823 971 KGILLFGPPGTGKTMLAKAVATEA 994 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkAIA~el 994 (1267)
.-+-|.||.|+|||+|++.|+...
T Consensus 32 e~~~iiG~sGsGKSTLl~~i~Gl~ 55 (240)
T d3dhwc1 32 QIYGVIGASGAGKSTLIRCVNLLE 55 (240)
T ss_dssp CEEEEEESTTSSHHHHHHHHTTSS
T ss_pred CEEEEECCCCCCHHHHHHHHCCCC
T ss_conf 799998999898889999875886
No 226
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=75.81 E-value=1.1 Score=18.87 Aligned_cols=22 Identities=14% Similarity=0.323 Sum_probs=19.5
Q ss_pred EEEEECCCCCHHHHHHHHHHHH
Q ss_conf 4999958998399999999999
Q 000823 972 GILLFGPPGTGKTMLAKAVATE 993 (1267)
Q Consensus 972 gILL~GPpGTGKT~LAkAIA~e 993 (1267)
.+++.|++|+|||+|+..+...
T Consensus 4 Kv~liG~~~vGKSsLi~rl~~~ 25 (164)
T d1z2aa1 4 KMVVVGNGAVGKSSMIQRYCKG 25 (164)
T ss_dssp EEEEECSTTSSHHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHHHC
T ss_conf 9999998995989999999829
No 227
>d1v43a3 c.37.1.12 (A:7-245) Hypothetical protein PH0022, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}
Probab=75.41 E-value=1.1 Score=19.03 Aligned_cols=25 Identities=32% Similarity=0.525 Sum_probs=21.3
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHHC
Q ss_conf 2499995899839999999999919
Q 000823 971 KGILLFGPPGTGKTMLAKAVATEAG 995 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkAIA~elg 995 (1267)
.-+-|.||.|+|||+|.+.++....
T Consensus 33 e~~~liGpsGaGKSTLl~~i~Gl~~ 57 (239)
T d1v43a3 33 EFLVLLGPSGCGKTTTLRMIAGLEE 57 (239)
T ss_dssp CEEEEECCTTSSHHHHHHHHHTSSC
T ss_pred CEEEEECCCCCHHHHHHHHHHCCCC
T ss_conf 8999999999829999999975899
No 228
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}
Probab=75.38 E-value=1.2 Score=18.74 Aligned_cols=23 Identities=22% Similarity=0.394 Sum_probs=20.1
Q ss_pred EEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 49999589983999999999991
Q 000823 972 GILLFGPPGTGKTMLAKAVATEA 994 (1267)
Q Consensus 972 gILL~GPpGTGKT~LAkAIA~el 994 (1267)
.+++.|.+|+|||+|+..+...-
T Consensus 8 Ki~vvG~~~vGKTsLi~~l~~~~ 30 (170)
T d1r2qa_ 8 KLVLLGESAVGKSSLVLRFVKGQ 30 (170)
T ss_dssp EEEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHHHCC
T ss_conf 99999999949899999998598
No 229
>d3d31a2 c.37.1.12 (A:1-229) Sulfate/molybdate ABC transporter, ATP-binding protein {Methanosarcina acetivorans [TaxId: 2214]}
Probab=75.37 E-value=0.87 Score=19.68 Aligned_cols=25 Identities=28% Similarity=0.515 Sum_probs=21.0
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHHC
Q ss_conf 2499995899839999999999919
Q 000823 971 KGILLFGPPGTGKTMLAKAVATEAG 995 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkAIA~elg 995 (1267)
.-+-|.||.|+|||++.+.++....
T Consensus 27 e~~~liGpsGaGKSTll~~l~Gl~~ 51 (229)
T d3d31a2 27 EYFVILGPTGAGKTLFLELIAGFHV 51 (229)
T ss_dssp CEEEEECCCTHHHHHHHHHHHTSSC
T ss_pred CEEEEECCCCCCHHHHHHHHHCCCC
T ss_conf 8999998999829999999964768
No 230
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF1 [TaxId: 9606]}
Probab=75.34 E-value=1.6 Score=17.79 Aligned_cols=23 Identities=26% Similarity=0.359 Sum_probs=20.3
Q ss_pred EEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 49999589983999999999991
Q 000823 972 GILLFGPPGTGKTMLAKAVATEA 994 (1267)
Q Consensus 972 gILL~GPpGTGKT~LAkAIA~el 994 (1267)
.|+|.|+||+|||+|...+...-
T Consensus 2 kivlvG~~~vGKSsLi~~l~~~~ 24 (160)
T d1r8sa_ 2 RILMVGLDAAGKTTILYKLKLGE 24 (160)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHHCCC
T ss_conf 89999999989899999996598
No 231
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId: 9606]}
Probab=75.15 E-value=1.2 Score=18.66 Aligned_cols=22 Identities=27% Similarity=0.524 Sum_probs=19.6
Q ss_pred EEEEECCCCCHHHHHHHHHHHH
Q ss_conf 4999958998399999999999
Q 000823 972 GILLFGPPGTGKTMLAKAVATE 993 (1267)
Q Consensus 972 gILL~GPpGTGKT~LAkAIA~e 993 (1267)
.+++.|++|+|||+|+..+...
T Consensus 6 Ki~vvG~~~vGKTsLi~~~~~~ 27 (175)
T d2f9la1 6 KVVLIGDSGVGKSNLLSRFTRN 27 (175)
T ss_dssp EEEEESSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHHC
T ss_conf 9999999990989999999829
No 232
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId: 9606]}
Probab=74.89 E-value=1.1 Score=18.85 Aligned_cols=22 Identities=36% Similarity=0.603 Sum_probs=19.9
Q ss_pred EEEEECCCCCHHHHHHHHHHHH
Q ss_conf 4999958998399999999999
Q 000823 972 GILLFGPPGTGKTMLAKAVATE 993 (1267)
Q Consensus 972 gILL~GPpGTGKT~LAkAIA~e 993 (1267)
.++|.|++|+|||+|.+.+...
T Consensus 7 Ki~lvG~~~vGKTsLi~~l~~~ 28 (171)
T d2ew1a1 7 KIVLIGNAGVGKTCLVRRFTQG 28 (171)
T ss_dssp EEEEEESTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHHC
T ss_conf 9999999991989999999729
No 233
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}
Probab=74.87 E-value=1.2 Score=18.61 Aligned_cols=23 Identities=30% Similarity=0.541 Sum_probs=20.0
Q ss_pred EEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 49999589983999999999991
Q 000823 972 GILLFGPPGTGKTMLAKAVATEA 994 (1267)
Q Consensus 972 gILL~GPpGTGKT~LAkAIA~el 994 (1267)
.+++.|++|+|||+|...+...-
T Consensus 4 Ki~lvG~~~vGKTsli~r~~~~~ 26 (168)
T d2atva1 4 KLAIFGRAGVGKSALVVRFLTKR 26 (168)
T ss_dssp EEEEECCTTSSHHHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHHHCC
T ss_conf 99999989978999999997398
No 234
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus halodurans [TaxId: 86665]}
Probab=74.38 E-value=1.3 Score=18.29 Aligned_cols=28 Identities=25% Similarity=0.399 Sum_probs=24.7
Q ss_pred CCEEEECCCCCHHHHHHHHHHHHHHHCCEE
Q ss_conf 913640689705889999999985719909
Q 000823 467 PRILLSGPAGSEIYQEMLAKALAHYFGAKL 496 (1267)
Q Consensus 467 ~rILLsgp~GsE~Yqe~LaKALA~~f~a~L 496 (1267)
+-|+|.|||| .++.++||+||++++-..
T Consensus 3 klI~i~G~~G--sGKTTva~~L~~~~~~~~ 30 (176)
T d2bdta1 3 KLYIITGPAG--VGKSTTCKRLAAQLDNSA 30 (176)
T ss_dssp EEEEEECSTT--SSHHHHHHHHHHHSSSEE
T ss_pred EEEEEECCCC--CCHHHHHHHHHHHCCCCE
T ss_conf 0899989999--998999999999809988
No 235
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId: 9606]}
Probab=73.90 E-value=1.3 Score=18.37 Aligned_cols=22 Identities=27% Similarity=0.377 Sum_probs=19.4
Q ss_pred EEEEECCCCCHHHHHHHHHHHH
Q ss_conf 4999958998399999999999
Q 000823 972 GILLFGPPGTGKTMLAKAVATE 993 (1267)
Q Consensus 972 gILL~GPpGTGKT~LAkAIA~e 993 (1267)
.++|.|.+|+|||+|+..+...
T Consensus 5 KivlvG~~~vGKTsLi~r~~~~ 26 (167)
T d1z08a1 5 KVVLLGEGCVGKTSLVLRYCEN 26 (167)
T ss_dssp EEEEECCTTSCHHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHHHC
T ss_conf 9999999993989999999829
No 236
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=73.74 E-value=1.7 Score=17.51 Aligned_cols=21 Identities=29% Similarity=0.575 Sum_probs=19.1
Q ss_pred EEEEECCCCCHHHHHHHHHHH
Q ss_conf 499995899839999999999
Q 000823 972 GILLFGPPGTGKTMLAKAVAT 992 (1267)
Q Consensus 972 gILL~GPpGTGKT~LAkAIA~ 992 (1267)
.+++.|++|+|||+|...+..
T Consensus 4 Ki~~vG~~~vGKSsLi~~~~~ 24 (175)
T d1ky3a_ 4 KVIILGDSGVGKTSLMHRYVN 24 (175)
T ss_dssp EEEEECCTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHC
T ss_conf 999999999698999999970
No 237
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=73.52 E-value=1.3 Score=18.48 Aligned_cols=22 Identities=23% Similarity=0.424 Sum_probs=19.6
Q ss_pred EEEEECCCCCHHHHHHHHHHHH
Q ss_conf 4999958998399999999999
Q 000823 972 GILLFGPPGTGKTMLAKAVATE 993 (1267)
Q Consensus 972 gILL~GPpGTGKT~LAkAIA~e 993 (1267)
.|+|.|.+|+|||+|...+...
T Consensus 7 Ki~lvG~~~vGKTsLi~r~~~~ 28 (171)
T d2erya1 7 RLVVVGGGGVGKSALTIQFIQS 28 (171)
T ss_dssp EEEEEECTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHHC
T ss_conf 8999999997999999999739
No 238
>d1b0ua_ c.37.1.12 (A:) ATP-binding subunit of the histidine permease {Salmonella typhimurium [TaxId: 90371]}
Probab=73.50 E-value=1 Score=19.22 Aligned_cols=24 Identities=21% Similarity=0.430 Sum_probs=20.6
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 249999589983999999999991
Q 000823 971 KGILLFGPPGTGKTMLAKAVATEA 994 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkAIA~el 994 (1267)
.-+-|.||.|+|||+|+++|+...
T Consensus 29 Ei~~iiG~sGsGKSTLl~~i~Gl~ 52 (258)
T d1b0ua_ 29 DVISIIGSSGSGKSTFLRCINFLE 52 (258)
T ss_dssp CEEEEECCTTSSHHHHHHHHTTSS
T ss_pred CEEEEECCCCCCHHHHHHHHHCCC
T ss_conf 799999899982999999997476
No 239
>d2bv3a2 c.37.1.8 (A:7-282) Elongation factor G (EF-G), N-terminal (G) domain {Thermus thermophilus [TaxId: 274]}
Probab=73.25 E-value=1.8 Score=17.43 Aligned_cols=24 Identities=17% Similarity=0.144 Sum_probs=14.9
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 249999589983999999999991
Q 000823 971 KGILLFGPPGTGKTMLAKAVATEA 994 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkAIA~el 994 (1267)
++|-|.|..|+|||+|+.++....
T Consensus 7 Rni~i~gh~~~GKTtL~e~ll~~~ 30 (276)
T d2bv3a2 7 RNIGIAAHIDAGKTTTTERILYYT 30 (276)
T ss_dssp EEEEEEECTTSCHHHHHHHHHHHH
T ss_pred EEEEEEECCCCCHHHHHHHHHHHC
T ss_conf 299999589899899999999964
No 240
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId: 9606]}
Probab=73.16 E-value=1.3 Score=18.37 Aligned_cols=23 Identities=22% Similarity=0.413 Sum_probs=20.0
Q ss_pred CEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 24999958998399999999999
Q 000823 971 KGILLFGPPGTGKTMLAKAVATE 993 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkAIA~e 993 (1267)
..|++.|.+|+|||+|+..+...
T Consensus 7 ~Kv~lvG~~~vGKTsLi~r~~~~ 29 (173)
T d2fn4a1 7 HKLVVVGGGGVGKSALTIQFIQS 29 (173)
T ss_dssp EEEEEEECTTSSHHHHHHHHHHS
T ss_pred EEEEEECCCCCCHHHHHHHHHHC
T ss_conf 79999997996989999999739
No 241
>d1sgwa_ c.37.1.12 (A:) Putative ABC transporter PF0895 {Pyrococcus furiosus [TaxId: 2261]}
Probab=73.10 E-value=1 Score=19.10 Aligned_cols=24 Identities=38% Similarity=0.555 Sum_probs=20.8
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 249999589983999999999991
Q 000823 971 KGILLFGPPGTGKTMLAKAVATEA 994 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkAIA~el 994 (1267)
.-+.|.||.|+|||+|.+.++..+
T Consensus 28 ei~~l~G~NGsGKSTLl~~i~gl~ 51 (200)
T d1sgwa_ 28 NVVNFHGPNGIGKTTLLKTISTYL 51 (200)
T ss_dssp CCEEEECCTTSSHHHHHHHHTTSS
T ss_pred CEEEEECCCCCHHHHHHHHHHCCC
T ss_conf 899999999971999999996620
No 242
>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}
Probab=73.04 E-value=1.8 Score=17.39 Aligned_cols=33 Identities=24% Similarity=0.250 Sum_probs=27.2
Q ss_pred CEEEEECC-CCCHHHHHHHHHHHHH---CCCEEEEEC
Q ss_conf 24999958-9983999999999991---995699611
Q 000823 971 KGILLFGP-PGTGKTMLAKAVATEA---GANFINISM 1003 (1267)
Q Consensus 971 ~gILL~GP-pGTGKT~LAkAIA~el---g~~vi~Id~ 1003 (1267)
+.+++.|- +|+|||+++-.||..+ |..+..++.
T Consensus 2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id~ 38 (224)
T d1byia_ 2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYKP 38 (224)
T ss_dssp EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEECS
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEECC
T ss_conf 5199998999942999999999999977993999886
No 243
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=73.02 E-value=1.4 Score=18.07 Aligned_cols=22 Identities=27% Similarity=0.576 Sum_probs=19.6
Q ss_pred EEEEECCCCCHHHHHHHHHHHH
Q ss_conf 4999958998399999999999
Q 000823 972 GILLFGPPGTGKTMLAKAVATE 993 (1267)
Q Consensus 972 gILL~GPpGTGKT~LAkAIA~e 993 (1267)
.|++.|.+|+|||+|+..+.+.
T Consensus 4 Kv~vvG~~~vGKSSLi~~l~~~ 25 (184)
T d1vg8a_ 4 KVIILGDSGVGKTSLMNQYVNK 25 (184)
T ss_dssp EEEEECCTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHHC
T ss_conf 9999999991989999999719
No 244
>d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis [TaxId: 1423]}
Probab=72.95 E-value=1.8 Score=17.39 Aligned_cols=22 Identities=23% Similarity=0.366 Sum_probs=19.9
Q ss_pred CEEEEECCCCCHHHHHHHHHHH
Q ss_conf 2499995899839999999999
Q 000823 971 KGILLFGPPGTGKTMLAKAVAT 992 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkAIA~ 992 (1267)
..|.|.|+||+|||+|..+|..
T Consensus 24 ~~I~lvG~~n~GKSTLin~L~g 45 (195)
T d1svia_ 24 PEIALAGRSNVGKSSFINSLIN 45 (195)
T ss_dssp CEEEEEEBTTSSHHHHHHHHHT
T ss_pred CEEEEECCCCCCHHHHHHHHCC
T ss_conf 8999989999879999998529
No 245
>d1oxxk2 c.37.1.12 (K:1-242) Glucose transport protein GlcV, N-terminal domain {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=72.60 E-value=1.1 Score=18.98 Aligned_cols=24 Identities=29% Similarity=0.551 Sum_probs=20.7
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 249999589983999999999991
Q 000823 971 KGILLFGPPGTGKTMLAKAVATEA 994 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkAIA~el 994 (1267)
.-+-|.||.|+|||++.+.|+...
T Consensus 32 e~~~iiG~sGsGKSTll~~i~gl~ 55 (242)
T d1oxxk2 32 ERFGILGPSGAGKTTFMRIIAGLD 55 (242)
T ss_dssp CEEEEECSCHHHHHHHHHHHHTSS
T ss_pred CEEEEECCCCCCHHHHHHHHHCCC
T ss_conf 899999899980999999997586
No 246
>d1zina1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=72.50 E-value=1.5 Score=17.98 Aligned_cols=31 Identities=16% Similarity=0.247 Sum_probs=27.3
Q ss_pred CEEEECCCCCHHHHHHHHHHHHHHHCCEEEEEE
Q ss_conf 136406897058899999999857199099983
Q 000823 468 RILLSGPAGSEIYQEMLAKALAHYFGAKLLIFD 500 (1267)
Q Consensus 468 rILLsgp~GsE~Yqe~LaKALA~~f~a~LL~lD 500 (1267)
||+|.|||| .++.++|+.||++++...+-.+
T Consensus 2 ~I~i~G~pG--SGKsT~a~~La~~~~~~~i~~~ 32 (182)
T d1zina1 2 NLVLMGLPG--AGKGTQAEKIVAAYGIPHISTG 32 (182)
T ss_dssp EEEEECSTT--SSHHHHHHHHHHHHCCCEEEHH
T ss_pred EEEEECCCC--CCHHHHHHHHHHHHCCCEECHH
T ss_conf 899988999--9989999999998799266153
No 247
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId: 9606]}
Probab=72.25 E-value=1.6 Score=17.82 Aligned_cols=22 Identities=32% Similarity=0.495 Sum_probs=19.6
Q ss_pred EEEEECCCCCHHHHHHHHHHHH
Q ss_conf 4999958998399999999999
Q 000823 972 GILLFGPPGTGKTMLAKAVATE 993 (1267)
Q Consensus 972 gILL~GPpGTGKT~LAkAIA~e 993 (1267)
.+++.|++|+|||+|++.+...
T Consensus 8 Ki~vvG~~~vGKTsli~~~~~~ 29 (170)
T d2g6ba1 8 KVMLVGDSGVGKTCLLVRFKDG 29 (170)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHHC
T ss_conf 9999999992999999999719
No 248
>d2j0sa1 c.37.1.19 (A:22-243) Probable ATP-dependent RNA helicase DDX48 {Human (Homo sapiens) [TaxId: 9606]}
Probab=72.20 E-value=1.8 Score=17.26 Aligned_cols=53 Identities=21% Similarity=0.331 Sum_probs=32.0
Q ss_pred CCCCHHCCCCHHHHHHHHHHHHCCCCCHHHHHCCCC--CCCCCEEEEECCCCCHHHHH
Q ss_conf 756100014099999999998572576256630898--88982499995899839999
Q 000823 931 GVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQL--TKPCKGILLFGPPGTGKTML 986 (1267)
Q Consensus 931 ~vt~ddI~Gle~vk~~L~e~I~~pl~~~e~f~k~~~--~kP~~gILL~GPpGTGKT~L 986 (1267)
..+|++++-.+.+.+.|.+.=. ..|.......+ .-..+.+++..|+|+|||..
T Consensus 16 ~~sF~~l~L~~~l~~~L~~~g~---~~pt~IQ~~aIp~il~g~dvi~~a~TGSGKTla 70 (222)
T d2j0sa1 16 TPTFDTMGLREDLLRGIYAYGF---EKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTAT 70 (222)
T ss_dssp CCSGGGGCCCHHHHHHHHHHTC---CSCCHHHHHHHHHHHTTCCEEEECCTTSSHHHH
T ss_pred CCCHHHCCCCHHHHHHHHHCCC---CCCCHHHHHHHHHHHCCCCEEEECCCCHHHHHH
T ss_conf 9997777989999999998799---999999999999998799869975743414544
No 249
>d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus horikoshii [TaxId: 53953]}
Probab=71.91 E-value=1.4 Score=18.12 Aligned_cols=22 Identities=23% Similarity=0.389 Sum_probs=19.7
Q ss_pred EEEEECCCCCHHHHHHHHHHHH
Q ss_conf 4999958998399999999999
Q 000823 972 GILLFGPPGTGKTMLAKAVATE 993 (1267)
Q Consensus 972 gILL~GPpGTGKT~LAkAIA~e 993 (1267)
.|+|.|+||+|||+|..+|..+
T Consensus 2 ~I~lvG~~nvGKSsLin~l~~~ 23 (184)
T d2cxxa1 2 TIIFAGRSNVGKSTLIYRLTGK 23 (184)
T ss_dssp EEEEEEBTTSSHHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHHCC
T ss_conf 8999999998899999999689
No 250
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId: 9606]}
Probab=71.52 E-value=1.6 Score=17.62 Aligned_cols=23 Identities=30% Similarity=0.510 Sum_probs=20.2
Q ss_pred CEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 24999958998399999999999
Q 000823 971 KGILLFGPPGTGKTMLAKAVATE 993 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkAIA~e 993 (1267)
-.+++.|.+|+|||+|...+...
T Consensus 8 iKi~vvG~~~vGKTsli~~l~~~ 30 (177)
T d1x3sa1 8 LKILIIGESGVGKSSLLLRFTDD 30 (177)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEEECCCCCCHHHHHHHHHHC
T ss_conf 28999998990889999999719
No 251
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId: 9606]}
Probab=71.45 E-value=1.5 Score=17.86 Aligned_cols=22 Identities=32% Similarity=0.543 Sum_probs=19.4
Q ss_pred EEEEECCCCCHHHHHHHHHHHH
Q ss_conf 4999958998399999999999
Q 000823 972 GILLFGPPGTGKTMLAKAVATE 993 (1267)
Q Consensus 972 gILL~GPpGTGKT~LAkAIA~e 993 (1267)
.|++.|.+|+|||+|+..+...
T Consensus 7 KI~lvG~~~vGKTsll~~~~~~ 28 (174)
T d2bmea1 7 KFLVIGNAGTGKSCLLHQFIEK 28 (174)
T ss_dssp EEEEEESTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHHC
T ss_conf 9999999990999999999709
No 252
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]}
Probab=71.39 E-value=1.5 Score=17.85 Aligned_cols=24 Identities=25% Similarity=0.385 Sum_probs=20.3
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 249999589983999999999991
Q 000823 971 KGILLFGPPGTGKTMLAKAVATEA 994 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkAIA~el 994 (1267)
.-+++.|++|+|||+|...+...-
T Consensus 3 ~KivvvG~~~vGKTsLi~~~~~~~ 26 (177)
T d1kmqa_ 3 KKLVIVGDGACGKTCLLIVNSKDQ 26 (177)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHSC
T ss_pred EEEEEECCCCCCHHHHHHHHHHCC
T ss_conf 799999989938899999997199
No 253
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo sapiens) [TaxId: 9606]}
Probab=71.37 E-value=1.5 Score=17.84 Aligned_cols=23 Identities=22% Similarity=0.345 Sum_probs=20.2
Q ss_pred CEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 24999958998399999999999
Q 000823 971 KGILLFGPPGTGKTMLAKAVATE 993 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkAIA~e 993 (1267)
..|++.|++|+|||+|...+...
T Consensus 5 ~Kv~liG~~~vGKTsLl~~~~~~ 27 (167)
T d1xtqa1 5 RKIAILGYRSVGKSSLTIQFVEG 27 (167)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHS
T ss_pred EEEEEECCCCCCHHHHHHHHHHC
T ss_conf 38999998992989999999719
No 254
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=71.27 E-value=1.5 Score=17.84 Aligned_cols=22 Identities=27% Similarity=0.492 Sum_probs=19.1
Q ss_pred EEEEECCCCCHHHHHHHHHHHH
Q ss_conf 4999958998399999999999
Q 000823 972 GILLFGPPGTGKTMLAKAVATE 993 (1267)
Q Consensus 972 gILL~GPpGTGKT~LAkAIA~e 993 (1267)
.|++.|.+|+|||+|...+...
T Consensus 4 Ki~viG~~~vGKTsLi~r~~~~ 25 (171)
T d2erxa1 4 RVAVFGAGGVGKSSLVLRFVKG 25 (171)
T ss_dssp EEEEECCTTSSHHHHHHHHHTC
T ss_pred EEEEECCCCCCHHHHHHHHHHC
T ss_conf 8999998997989999999709
No 255
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=71.26 E-value=1.6 Score=17.81 Aligned_cols=22 Identities=23% Similarity=0.419 Sum_probs=19.3
Q ss_pred EEEEECCCCCHHHHHHHHHHHH
Q ss_conf 4999958998399999999999
Q 000823 972 GILLFGPPGTGKTMLAKAVATE 993 (1267)
Q Consensus 972 gILL~GPpGTGKT~LAkAIA~e 993 (1267)
.|++.|.+|+|||+|++.+...
T Consensus 2 Kv~vvG~~~vGKTsLi~r~~~~ 23 (164)
T d1yzqa1 2 KLVFLGEQSVGKTSLITRFMYD 23 (164)
T ss_dssp EEEEEESTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHHC
T ss_conf 8999998990989999999849
No 256
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=71.10 E-value=1.6 Score=17.77 Aligned_cols=22 Identities=36% Similarity=0.584 Sum_probs=19.6
Q ss_pred EEEEECCCCCHHHHHHHHHHHH
Q ss_conf 4999958998399999999999
Q 000823 972 GILLFGPPGTGKTMLAKAVATE 993 (1267)
Q Consensus 972 gILL~GPpGTGKT~LAkAIA~e 993 (1267)
.+++.|.+|+|||+|+.++...
T Consensus 4 Ki~vvG~~~vGKTSli~~l~~~ 25 (166)
T d1g16a_ 4 KILLIGDSGVGKSCLLVRFVED 25 (166)
T ss_dssp EEEEEESTTSSHHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHHHC
T ss_conf 9999999996789999999868
No 257
>d1xzpa2 c.37.1.8 (A:212-371) TrmE GTPase domain {Thermotoga maritima [TaxId: 2336]}
Probab=70.77 E-value=2 Score=17.04 Aligned_cols=23 Identities=26% Similarity=0.556 Sum_probs=20.2
Q ss_pred EEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 49999589983999999999991
Q 000823 972 GILLFGPPGTGKTMLAKAVATEA 994 (1267)
Q Consensus 972 gILL~GPpGTGKT~LAkAIA~el 994 (1267)
.|.|.|.||+|||+|..++..+-
T Consensus 2 kI~liG~~n~GKSSLin~l~g~~ 24 (160)
T d1xzpa2 2 RMVIVGKPNVGKSTLLNRLLNED 24 (160)
T ss_dssp EEEEECCHHHHTCHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHHCCC
T ss_conf 89999999999999999995899
No 258
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]}
Probab=70.56 E-value=1.8 Score=17.37 Aligned_cols=23 Identities=22% Similarity=0.453 Sum_probs=19.9
Q ss_pred EEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 49999589983999999999991
Q 000823 972 GILLFGPPGTGKTMLAKAVATEA 994 (1267)
Q Consensus 972 gILL~GPpGTGKT~LAkAIA~el 994 (1267)
.|++.|.+|+|||+|...+...-
T Consensus 5 KivvvG~~~vGKTsli~r~~~~~ 27 (167)
T d1c1ya_ 5 KLVVLGSGGVGKSALTVQFVQGI 27 (167)
T ss_dssp EEEEECSTTSSHHHHHHHHHHCC
T ss_pred EEEEECCCCCCHHHHHHHHHCCC
T ss_conf 99999989989999999997098
No 259
>d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea mays) [TaxId: 4577]}
Probab=70.52 E-value=1.4 Score=18.08 Aligned_cols=30 Identities=7% Similarity=0.165 Sum_probs=27.1
Q ss_pred CCCEEEECCCCCHHHHHHHHHHHHHHHCCEEE
Q ss_conf 99136406897058899999999857199099
Q 000823 466 NPRILLSGPAGSEIYQEMLAKALAHYFGAKLL 497 (1267)
Q Consensus 466 s~rILLsgp~GsE~Yqe~LaKALA~~f~a~LL 497 (1267)
+.+|.|.|||| .++.++|+.||++++.+.+
T Consensus 3 Pm~I~i~GppG--sGKsT~a~~La~~~~~~~i 32 (189)
T d1zaka1 3 PLKVMISGAPA--SGKGTQCELIKTKYQLAHI 32 (189)
T ss_dssp SCCEEEEESTT--SSHHHHHHHHHHHHCCEEC
T ss_pred CEEEEEECCCC--CCHHHHHHHHHHHHCCCEE
T ss_conf 72999988999--9989999999998799178
No 260
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]}
Probab=70.14 E-value=1.8 Score=17.26 Aligned_cols=24 Identities=29% Similarity=0.317 Sum_probs=20.4
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 249999589983999999999991
Q 000823 971 KGILLFGPPGTGKTMLAKAVATEA 994 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkAIA~el 994 (1267)
..+++.|.+|+|||+|...+...-
T Consensus 6 iKivviG~~~vGKTsli~~~~~~~ 29 (183)
T d1mh1a_ 6 IKCVVVGDGAVGKTCLLISYTTNA 29 (183)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHSS
T ss_pred EEEEEECCCCCCHHHHHHHHHHCC
T ss_conf 999999999979999999997498
No 261
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=70.13 E-value=1.8 Score=17.26 Aligned_cols=23 Identities=17% Similarity=0.393 Sum_probs=19.8
Q ss_pred CEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 24999958998399999999999
Q 000823 971 KGILLFGPPGTGKTMLAKAVATE 993 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkAIA~e 993 (1267)
-.+++.|.+|+|||+|...+...
T Consensus 4 iKi~vvG~~~vGKTsLi~~~~~~ 26 (170)
T d1ek0a_ 4 IKLVLLGEAAVGKSSIVLRFVSN 26 (170)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEEECCCCCCHHHHHHHHHHC
T ss_conf 99999999991989999999729
No 262
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=70.13 E-value=1.7 Score=17.52 Aligned_cols=22 Identities=32% Similarity=0.573 Sum_probs=19.5
Q ss_pred EEEEECCCCCHHHHHHHHHHHH
Q ss_conf 4999958998399999999999
Q 000823 972 GILLFGPPGTGKTMLAKAVATE 993 (1267)
Q Consensus 972 gILL~GPpGTGKT~LAkAIA~e 993 (1267)
.|++.|++|+|||+|+..+...
T Consensus 8 KivvvG~~~vGKTsli~~l~~~ 29 (194)
T d2bcgy1 8 KLLLIGNSGVGKSCLLLRFSDD 29 (194)
T ss_dssp EEEEEESTTSSHHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHHHC
T ss_conf 9999999990989999999619
No 263
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=69.94 E-value=1.7 Score=17.47 Aligned_cols=23 Identities=30% Similarity=0.421 Sum_probs=19.9
Q ss_pred CEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 24999958998399999999999
Q 000823 971 KGILLFGPPGTGKTMLAKAVATE 993 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkAIA~e 993 (1267)
.-++|.|.+|+|||+|+..+...
T Consensus 3 ~KivliG~~~vGKTsli~r~~~~ 25 (179)
T d1m7ba_ 3 CKIVVVGDSQCGKTALLHVFAKD 25 (179)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHS
T ss_pred EEEEEECCCCCCHHHHHHHHHHC
T ss_conf 69999999995989999999729
No 264
>d1p6xa_ c.37.1.1 (A:) Thymidine kinase {Equine herpesvirus type 4 [TaxId: 10331]}
Probab=69.93 E-value=1.5 Score=17.94 Aligned_cols=23 Identities=35% Similarity=0.447 Sum_probs=12.3
Q ss_pred EEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 49999589983999999999991
Q 000823 972 GILLFGPPGTGKTMLAKAVATEA 994 (1267)
Q Consensus 972 gILL~GPpGTGKT~LAkAIA~el 994 (1267)
.|.|.|+-|+|||++++.+++.+
T Consensus 8 rI~iEG~iGsGKSTl~~~L~~~l 30 (333)
T d1p6xa_ 8 RIYLDGVYGIGKSTTGRVMASAA 30 (333)
T ss_dssp EEEEECSTTSSHHHHHHHHHSGG
T ss_pred EEEEECCCCCCHHHHHHHHHHHH
T ss_conf 99998886678999999999986
No 265
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId: 10090]}
Probab=69.67 E-value=1.9 Score=17.17 Aligned_cols=22 Identities=23% Similarity=0.453 Sum_probs=19.6
Q ss_pred EEEEECCCCCHHHHHHHHHHHH
Q ss_conf 4999958998399999999999
Q 000823 972 GILLFGPPGTGKTMLAKAVATE 993 (1267)
Q Consensus 972 gILL~GPpGTGKT~LAkAIA~e 993 (1267)
.|++.|.+|+|||+|.+.+...
T Consensus 6 Ki~lvG~~~vGKTsli~rl~~~ 27 (167)
T d1z0ja1 6 KVCLLGDTGVGKSSIMWRFVED 27 (167)
T ss_dssp EEEEECCTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHHC
T ss_conf 8999998994999999999739
No 266
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo sapiens) [TaxId: 9606]}
Probab=69.15 E-value=1.8 Score=17.29 Aligned_cols=21 Identities=38% Similarity=0.634 Sum_probs=18.8
Q ss_pred EEEEECCCCCHHHHHHHHHHH
Q ss_conf 499995899839999999999
Q 000823 972 GILLFGPPGTGKTMLAKAVAT 992 (1267)
Q Consensus 972 gILL~GPpGTGKT~LAkAIA~ 992 (1267)
-|+|.|.+|+|||+|+..+..
T Consensus 5 Kv~lvG~~~vGKTsLi~~~~~ 25 (172)
T d2g3ya1 5 RVVLIGEQGVGKSTLANIFAG 25 (172)
T ss_dssp EEEEECCTTSSHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHHH
T ss_conf 999999899299999999972
No 267
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=68.72 E-value=2.2 Score=16.73 Aligned_cols=25 Identities=24% Similarity=0.444 Sum_probs=21.0
Q ss_pred CCCEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 9824999958998399999999999
Q 000823 969 PCKGILLFGPPGTGKTMLAKAVATE 993 (1267)
Q Consensus 969 P~~gILL~GPpGTGKT~LAkAIA~e 993 (1267)
|.-.+++.|.+|+|||+|...+...
T Consensus 3 pt~Ki~lvG~~~vGKTsll~~~~~~ 27 (169)
T d1x1ra1 3 PTYKLVVVGDGGVGKSALTIQFFQK 27 (169)
T ss_dssp CEEEEEEECCTTSSHHHHHHHHHHS
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHC
T ss_conf 8579999998995989999999709
No 268
>d2b8ta1 c.37.1.24 (A:11-149) Thymidine kinase, TK1, N-terminal domain {Ureaplasma urealyticum [TaxId: 2130]}
Probab=68.67 E-value=2.2 Score=16.73 Aligned_cols=68 Identities=19% Similarity=0.236 Sum_probs=38.0
Q ss_pred EEEECCCCCHHHH-HHHHHHH--HHCCCEEEEECCCCCHHCC-------CCC-----HHHHHHHHHHHH----HCCCEEE
Q ss_conf 9999589983999-9999999--9199569961110001002-------751-----899999999987----1299179
Q 000823 973 ILLFGPPGTGKTM-LAKAVAT--EAGANFINISMSSITSKWF-------GEG-----EKYVKAVFSLAS----KIAPSVI 1033 (1267)
Q Consensus 973 ILL~GPpGTGKT~-LAkAIA~--elg~~vi~Id~seL~s~~~-------Ge~-----ek~I~~iF~~A~----k~~PsII 1033 (1267)
-+++||-.+|||+ |.+.+-+ ..+..++-+....- .++. |.. -.....++.... .....+|
T Consensus 5 ~~i~GpMfsGKTteLi~~~~~~~~~~~kv~~ikp~~D-~R~~~~i~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~dvI 83 (139)
T d2b8ta1 5 EFITGPMFAGKTAELIRRLHRLEYADVKYLVFKPKID-TRSIRNIQSRTGTSLPSVEVESAPEILNYIMSNSFNDETKVI 83 (139)
T ss_dssp EEEECSTTSCHHHHHHHHHHHHHHTTCCEEEEEECCC-GGGCSSCCCCCCCSSCCEEESSTHHHHHHHHSTTSCTTCCEE
T ss_pred EEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCC-CCCCCEEECCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCEE
T ss_conf 9999150678999999999999877995899977313-424644772368526558952640357888753016676799
Q ss_pred EECCCHHH
Q ss_conf 99352122
Q 000823 1034 FVDEVDSM 1041 (1267)
Q Consensus 1034 iIDEID~L 1041 (1267)
+|||+.-+
T Consensus 84 ~IDE~QFf 91 (139)
T d2b8ta1 84 GIDEVQFF 91 (139)
T ss_dssp EECSGGGS
T ss_pred EECHHHHC
T ss_conf 96103435
No 269
>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS kinase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=68.06 E-value=0.66 Score=20.60 Aligned_cols=33 Identities=18% Similarity=0.215 Sum_probs=26.6
Q ss_pred CCCEEEECCCCCHHHHHHHHHHHHHHHCCEEEEEE
Q ss_conf 99136406897058899999999857199099983
Q 000823 466 NPRILLSGPAGSEIYQEMLAKALAHYFGAKLLIFD 500 (1267)
Q Consensus 466 s~rILLsgp~GsE~Yqe~LaKALA~~f~a~LL~lD 500 (1267)
+.-|+|.|+|| -++.++||+||++++.+....+
T Consensus 19 g~vI~L~G~pG--SGKTTiAk~La~~l~~~~~~~~ 51 (195)
T d1x6va3 19 GCTVWLTGLSG--AGKTTVSMALEEYLVCHGIPCY 51 (195)
T ss_dssp CEEEEEESSCH--HHHHHHHHHHHHHHHHTTCCEE
T ss_pred CEEEEEECCCC--CCHHHHHHHHHHHHHHCCCCCC
T ss_conf 96999889999--9999999999999974479731
No 270
>g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=67.81 E-value=2.2 Score=16.76 Aligned_cols=62 Identities=16% Similarity=0.111 Sum_probs=31.2
Q ss_pred HHHHHHCCCEEEEECCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCHHHHHCCCCCCC
Q ss_conf 99987129917999352122138999843799999988655421688656777689999439999995999820354436
Q 000823 1022 FSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDTERILVLAATNRPFDLDEAVIRRLPRRLM 1101 (1267)
Q Consensus 1022 F~~A~k~~PsIIiIDEID~L~~~r~~~~~~~a~~~il~~LL~~ldgl~~~~~~~VlVIaTTN~p~~Ld~aLlrRFd~~I~ 1101 (1267)
+..+....|.+|+|||++.-+ +......+++.+ ..+.. ... -||.+|..+.. +.-+|+++.
T Consensus 218 ~~~~l~~~~~llllDEp~~~L-------d~~~~~~l~~~l----~~~~~--~~~-qviv~TH~~~~-----~~~~D~ii~ 278 (292)
T g1f2t.1 218 MSLYLAGEISLLILDEPTPYL-------DEERRRKLITIM----ERYLK--KIP-QVILVSHDEEL-----KDAADHVIR 278 (292)
T ss_dssp HHHHHHSSCSEEEEESCSCTT-------CHHHHHHHHHHH----HHTGG--GSS-EEEEEESCGGG-----GGGCSEEEE
T ss_pred HHHHHCCCCCEEEEECCCCCC-------CHHHHHHHHHHH----HHHHH--CCC-EEEEEEECHHH-----HHHCCEEEE
T ss_conf 866544799889971875548-------999999999999----99983--799-99999620899-----985999999
Q ss_pred C
Q ss_conf 9
Q 000823 1102 V 1102 (1267)
Q Consensus 1102 v 1102 (1267)
+
T Consensus 279 l 279 (292)
T g1f2t.1 279 I 279 (292)
T ss_dssp E
T ss_pred E
T ss_conf 9
No 271
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=67.64 E-value=0.8 Score=19.96 Aligned_cols=27 Identities=22% Similarity=0.269 Sum_probs=24.2
Q ss_pred CEEEECCCCCHHHHHHHHHHHHHHHCCEE
Q ss_conf 13640689705889999999985719909
Q 000823 468 RILLSGPAGSEIYQEMLAKALAHYFGAKL 496 (1267)
Q Consensus 468 rILLsgp~GsE~Yqe~LaKALA~~f~a~L 496 (1267)
-|+|.|++| .++.++||+||+.++++.
T Consensus 8 ~I~l~G~~G--sGKTTia~~La~~L~~~~ 34 (183)
T d1m8pa3 8 TIFLTGYMN--SGKDAIARALQVTLNQQG 34 (183)
T ss_dssp EEEEECSTT--SSHHHHHHHHHHHHHHHC
T ss_pred EEEEECCCC--CCHHHHHHHHHHHHHHCC
T ss_conf 999889999--999999999999986507
No 272
>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]}
Probab=67.53 E-value=2.1 Score=16.87 Aligned_cols=23 Identities=26% Similarity=0.320 Sum_probs=19.5
Q ss_pred EEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 49999589983999999999991
Q 000823 972 GILLFGPPGTGKTMLAKAVATEA 994 (1267)
Q Consensus 972 gILL~GPpGTGKT~LAkAIA~el 994 (1267)
-+++.|++|+|||+|...+...-
T Consensus 5 KvvllG~~~vGKTSli~r~~~~~ 27 (191)
T d2ngra_ 5 KCVVVGDGAVGKTCLLISYTTNK 27 (191)
T ss_dssp EEEEEESTTSSHHHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHHHCC
T ss_conf 99999999969999999997199
No 273
>d1p5zb_ c.37.1.1 (B:) Deoxycytidine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=67.19 E-value=0.69 Score=20.43 Aligned_cols=27 Identities=19% Similarity=0.179 Sum_probs=23.6
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHHCCC
Q ss_conf 249999589983999999999991995
Q 000823 971 KGILLFGPPGTGKTMLAKAVATEAGAN 997 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkAIA~elg~~ 997 (1267)
+-|.|.|+-|+|||++++.|+..+...
T Consensus 3 k~I~ieG~dGsGKST~~~~L~~~l~~~ 29 (241)
T d1p5zb_ 3 KKISIEGNIAAGKSTFVNILKQLCEDW 29 (241)
T ss_dssp EEEEEECSTTSSHHHHHTTTGGGCTTE
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHCC
T ss_conf 889998788877999999999997358
No 274
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId: 9606]}
Probab=66.78 E-value=1.7 Score=17.51 Aligned_cols=26 Identities=23% Similarity=0.245 Sum_probs=21.3
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 89824999958998399999999999
Q 000823 968 KPCKGILLFGPPGTGKTMLAKAVATE 993 (1267)
Q Consensus 968 kP~~gILL~GPpGTGKT~LAkAIA~e 993 (1267)
.+.-.+++.|.+|+|||+|...+...
T Consensus 7 ~~~~Ki~lvG~~~vGKTsLi~r~~~~ 32 (185)
T d2atxa1 7 ALMLKCVVVGDGAVGKTCLLMSYAND 32 (185)
T ss_dssp EEEEEEEEEECTTSSHHHHHHHHHHS
T ss_pred CCEEEEEEECCCCCCHHHHHHHHHHC
T ss_conf 71899999999998999999999649
No 275
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId: 9606]}
Probab=65.97 E-value=2.4 Score=16.35 Aligned_cols=22 Identities=27% Similarity=0.449 Sum_probs=19.3
Q ss_pred EEEEECCCCCHHHHHHHHHHHH
Q ss_conf 4999958998399999999999
Q 000823 972 GILLFGPPGTGKTMLAKAVATE 993 (1267)
Q Consensus 972 gILL~GPpGTGKT~LAkAIA~e 993 (1267)
.+++.|++|+|||+|++.+.+.
T Consensus 7 Ki~ivG~~~vGKTsLi~~l~~~ 28 (186)
T d2f7sa1 7 KLLALGDSGVGKTTFLYRYTDN 28 (186)
T ss_dssp EEEEESCTTSSHHHHHHHHHCS
T ss_pred EEEEECCCCCCHHHHHHHHHCC
T ss_conf 9999999991989999999619
No 276
>d1xpua3 c.37.1.11 (A:129-417) Transcription termination factor Rho, ATPase domain {Escherichia coli [TaxId: 562]}
Probab=65.85 E-value=2.5 Score=16.34 Aligned_cols=24 Identities=38% Similarity=0.606 Sum_probs=21.7
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 249999589983999999999991
Q 000823 971 KGILLFGPPGTGKTMLAKAVATEA 994 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkAIA~el 994 (1267)
..++|.|++|+|||.|+..+++..
T Consensus 44 Qr~~I~g~~g~GKT~l~~~i~~~~ 67 (289)
T d1xpua3 44 QRGLIVAPPKAGKTMLLQNIAQSI 67 (289)
T ss_dssp CEEEEEECSSSSHHHHHHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHHHHH
T ss_conf 755686799988789999999977
No 277
>d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]}
Probab=65.58 E-value=2.5 Score=16.30 Aligned_cols=21 Identities=29% Similarity=0.594 Sum_probs=19.1
Q ss_pred EEEEECCCCCHHHHHHHHHHH
Q ss_conf 499995899839999999999
Q 000823 972 GILLFGPPGTGKTMLAKAVAT 992 (1267)
Q Consensus 972 gILL~GPpGTGKT~LAkAIA~ 992 (1267)
.|.+.|++|+|||+|.+++..
T Consensus 2 ~V~liG~~n~GKSsLi~~L~~ 22 (171)
T d1mkya1 2 TVLIVGRPNVGKSTLFNKLVK 22 (171)
T ss_dssp EEEEECCTTSSHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHHC
T ss_conf 899999999989999999967
No 278
>d1egaa1 c.37.1.8 (A:4-182) GTPase Era, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=65.00 E-value=2.2 Score=16.71 Aligned_cols=24 Identities=29% Similarity=0.552 Sum_probs=20.7
Q ss_pred CCEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 824999958998399999999999
Q 000823 970 CKGILLFGPPGTGKTMLAKAVATE 993 (1267)
Q Consensus 970 ~~gILL~GPpGTGKT~LAkAIA~e 993 (1267)
++-|.|.|.+|+|||+|..++.+.
T Consensus 5 ~~~I~iiG~~nvGKSSLin~L~~~ 28 (179)
T d1egaa1 5 CGFIAIVGRPNVGKSTLLNKLLGQ 28 (179)
T ss_dssp EEEEEEECSSSSSHHHHHHHHHTC
T ss_pred CCEEEEECCCCCCHHHHHHHHHCC
T ss_conf 619999979999899999999589
No 279
>d2eyqa3 c.37.1.19 (A:546-778) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}
Probab=64.62 E-value=2.6 Score=16.17 Aligned_cols=35 Identities=26% Similarity=0.198 Sum_probs=25.3
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHH---CCCEEEEECCC
Q ss_conf 249999589983999999999991---99569961110
Q 000823 971 KGILLFGPPGTGKTMLAKAVATEA---GANFINISMSS 1005 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkAIA~el---g~~vi~Id~se 1005 (1267)
...||+|..|+|||.++-..+... |..++-+-...
T Consensus 77 ~~~LL~GdvGsGKT~V~~~a~~~~~~~g~qv~~l~Pt~ 114 (233)
T d2eyqa3 77 MDRLVCGDVGFGKTEVAMRAAFLAVDNHKQVAVLVPTT 114 (233)
T ss_dssp CEEEEECCCCTTTHHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred CCEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEECCHH
T ss_conf 67089838887728999999999997689569974688
No 280
>d1ji0a_ c.37.1.12 (A:) Branched chain aminoacid ABC transporter {Thermotoga maritima, TM1139 [TaxId: 2336]}
Probab=64.49 E-value=2.1 Score=16.91 Aligned_cols=36 Identities=31% Similarity=0.312 Sum_probs=25.3
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHHCCC--EEEEECCCC
Q ss_conf 249999589983999999999991995--699611100
Q 000823 971 KGILLFGPPGTGKTMLAKAVATEAGAN--FINISMSSI 1006 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkAIA~elg~~--vi~Id~seL 1006 (1267)
.-+-|.||.|+|||+|.++|+...... -+.++..++
T Consensus 33 ei~~liGpnGaGKSTl~~~i~Gl~~p~~G~I~~~G~~i 70 (240)
T d1ji0a_ 33 QIVTLIGANGAGKTTTLSAIAGLVRAQKGKIIFNGQDI 70 (240)
T ss_dssp CEEEEECSTTSSHHHHHHHHTTSSCCSEEEEEETTEEC
T ss_pred CEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCCCC
T ss_conf 79999999998599999999678888803898424434
No 281
>g1xew.1 c.37.1.12 (X:,Y:) Smc head domain {Pyrococcus furiosus [TaxId: 2261]}
Probab=64.30 E-value=2 Score=17.02 Aligned_cols=21 Identities=14% Similarity=0.183 Sum_probs=17.1
Q ss_pred CEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 13640689705889999999985
Q 000823 468 RILLSGPAGSEIYQEMLAKALAH 490 (1267)
Q Consensus 468 rILLsgp~GsE~Yqe~LaKALA~ 490 (1267)
=-+|.||-| .++.++..|++-
T Consensus 28 lnvi~G~NG--sGKS~il~AI~~ 48 (329)
T g1xew.1 28 FTAIVGANG--SGKSNIGDAILF 48 (329)
T ss_dssp EEEEEECTT--SSSHHHHHHHHH
T ss_pred EEEEECCCC--CCHHHHHHHHHH
T ss_conf 599999999--889999999999
No 282
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId: 10090]}
Probab=63.11 E-value=1.5 Score=18.02 Aligned_cols=21 Identities=33% Similarity=0.521 Sum_probs=18.8
Q ss_pred EEEEECCCCCHHHHHHHHHHH
Q ss_conf 499995899839999999999
Q 000823 972 GILLFGPPGTGKTMLAKAVAT 992 (1267)
Q Consensus 972 gILL~GPpGTGKT~LAkAIA~ 992 (1267)
.|++.|.+|+|||+|..++..
T Consensus 8 Ki~vvG~~~vGKTsLi~~l~~ 28 (173)
T d2fu5c1 8 KLLLIGDSGVGKTCVLFRFSE 28 (173)
T ss_dssp EEEEECCCCC-----------
T ss_pred EEEEECCCCCCHHHHHHHHHH
T ss_conf 999999999499999999970
No 283
>d1wp9a1 c.37.1.19 (A:1-200) putative ATP-dependent RNA helicase PF2015 {Pyrococcus furiosus [TaxId: 2261]}
Probab=63.06 E-value=2.7 Score=15.97 Aligned_cols=33 Identities=27% Similarity=0.459 Sum_probs=21.9
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHH----CCCEEEEEC
Q ss_conf 249999589983999999999991----995699611
Q 000823 971 KGILLFGPPGTGKTMLAKAVATEA----GANFINISM 1003 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkAIA~el----g~~vi~Id~ 1003 (1267)
++.|+.+|+|+|||.++-.++... +..++.+..
T Consensus 24 ~n~lv~~pTGsGKT~i~~~~~~~~~~~~~~~il~i~P 60 (200)
T d1wp9a1 24 TNCLIVLPTGLGKTLIAMMIAEYRLTKYGGKVLMLAP 60 (200)
T ss_dssp SCEEEECCTTSCHHHHHHHHHHHHHHHSCSCEEEECS
T ss_pred CCEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEECC
T ss_conf 9969991899728899999999999706981899737
No 284
>d1g6ha_ c.37.1.12 (A:) MJ1267 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=61.94 E-value=2.4 Score=16.35 Aligned_cols=23 Identities=30% Similarity=0.546 Sum_probs=15.1
Q ss_pred EEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 49999589983999999999991
Q 000823 972 GILLFGPPGTGKTMLAKAVATEA 994 (1267)
Q Consensus 972 gILL~GPpGTGKT~LAkAIA~el 994 (1267)
-+-|.||.|+|||+|++.|+...
T Consensus 32 i~~liG~nGaGKSTLl~~i~Gl~ 54 (254)
T d1g6ha_ 32 VTLIIGPNGSGKSTLINVITGFL 54 (254)
T ss_dssp EEEEECSTTSSHHHHHHHHTTSS
T ss_pred EEEEECCCCCCHHHHHHHHHCCC
T ss_conf 99999999984999999997797
No 285
>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}
Probab=60.37 E-value=3 Score=15.64 Aligned_cols=34 Identities=32% Similarity=0.422 Sum_probs=27.0
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHH---CCCEEEEECC
Q ss_conf 249999589983999999999991---9956996111
Q 000823 971 KGILLFGPPGTGKTMLAKAVATEA---GANFINISMS 1004 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkAIA~el---g~~vi~Id~s 1004 (1267)
+=+++.|.=|+|||+++-.+|..+ |..+.-+|+-
T Consensus 21 ~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~D 57 (279)
T d1ihua2 21 GLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSD 57 (279)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESC
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECC
T ss_conf 8999979998878999999999999789938999379
No 286
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}
Probab=59.96 E-value=1.4 Score=18.11 Aligned_cols=22 Identities=41% Similarity=0.545 Sum_probs=19.0
Q ss_pred EEEEECCCCCHHHHHHHHHHHH
Q ss_conf 4999958998399999999999
Q 000823 972 GILLFGPPGTGKTMLAKAVATE 993 (1267)
Q Consensus 972 gILL~GPpGTGKT~LAkAIA~e 993 (1267)
.+++.|++|+|||+|..++...
T Consensus 5 Ki~vvG~~~vGKTsli~~~~~~ 26 (170)
T d1i2ma_ 5 KLVLVGDGGTGKTTFVKRHLTG 26 (170)
T ss_dssp EEEEEECTTSSHHHHHHTTC--
T ss_pred EEEEECCCCCCHHHHHHHHHHC
T ss_conf 9999999990889999999849
No 287
>d1vpla_ c.37.1.12 (A:) Putative ABC transporter TM0544 {Thermotoga maritima [TaxId: 2336]}
Probab=59.44 E-value=3.1 Score=15.53 Aligned_cols=25 Identities=32% Similarity=0.426 Sum_probs=20.9
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHHC
Q ss_conf 2499995899839999999999919
Q 000823 971 KGILLFGPPGTGKTMLAKAVATEAG 995 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkAIA~elg 995 (1267)
.-+-|.||.|+|||+|.+.|+....
T Consensus 29 ei~glvG~nGaGKSTLl~~l~G~~~ 53 (238)
T d1vpla_ 29 EIFGLIGPNGAGKTTTLRIISTLIK 53 (238)
T ss_dssp CEEEEECCTTSSHHHHHHHHTTSSC
T ss_pred CEEEEECCCCCCHHHHHHHHHCCCC
T ss_conf 7999999999999999999966988
No 288
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=59.18 E-value=3.2 Score=15.50 Aligned_cols=22 Identities=27% Similarity=0.439 Sum_probs=19.7
Q ss_pred EEEEECCCCCHHHHHHHHHHHH
Q ss_conf 4999958998399999999999
Q 000823 972 GILLFGPPGTGKTMLAKAVATE 993 (1267)
Q Consensus 972 gILL~GPpGTGKT~LAkAIA~e 993 (1267)
.|++.|++|+|||+|+..+...
T Consensus 4 Kv~liG~~~vGKTsLl~~~~~~ 25 (165)
T d1z06a1 4 KIIVIGDSNVGKTCLTYRFCAG 25 (165)
T ss_dssp EEEEECCTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHHC
T ss_conf 9999999992989999999739
No 289
>d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=58.23 E-value=3.3 Score=15.39 Aligned_cols=24 Identities=25% Similarity=0.379 Sum_probs=20.5
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 249999589983999999999991
Q 000823 971 KGILLFGPPGTGKTMLAKAVATEA 994 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkAIA~el 994 (1267)
-.+++.|..|+|||+|...+...-
T Consensus 3 ~Kiv~lG~~~vGKTsll~r~~~~~ 26 (200)
T d2bcjq2 3 LKLLLLGTGESGKSTFIKQMRIIH 26 (200)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHHT
T ss_pred EEEEEECCCCCCHHHHHHHHHCCC
T ss_conf 599999999998899999996799
No 290
>d1l7vc_ c.37.1.12 (C:) ABC transporter involved in vitamin B12 uptake, BtuD {Escherichia coli [TaxId: 562]}
Probab=56.92 E-value=2.6 Score=16.15 Aligned_cols=22 Identities=36% Similarity=0.570 Sum_probs=19.3
Q ss_pred CEEEEECCCCCHHHHHHHHHHH
Q ss_conf 2499995899839999999999
Q 000823 971 KGILLFGPPGTGKTMLAKAVAT 992 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkAIA~ 992 (1267)
.-+-|.||.|+|||+|.+.++.
T Consensus 26 ei~~iiG~nGaGKSTLl~~l~G 47 (231)
T d1l7vc_ 26 EILHLVGPNGAGKSTLLARMAG 47 (231)
T ss_dssp CEEECBCCTTSSHHHHHHHHHT
T ss_pred CEEEEECCCCCCHHHHHHHHHC
T ss_conf 8999998999809999999948
No 291
>d1lnza2 c.37.1.8 (A:158-342) Obg GTP-binding protein middle domain {Bacillus subtilis [TaxId: 1423]}
Probab=56.76 E-value=2.9 Score=15.80 Aligned_cols=21 Identities=33% Similarity=0.531 Sum_probs=18.6
Q ss_pred EEEEECCCCCHHHHHHHHHHH
Q ss_conf 499995899839999999999
Q 000823 972 GILLFGPPGTGKTMLAKAVAT 992 (1267)
Q Consensus 972 gILL~GPpGTGKT~LAkAIA~ 992 (1267)
.|-|.|+|++|||+|..++..
T Consensus 3 ~VaiiG~~nvGKSSLin~L~~ 23 (185)
T d1lnza2 3 DVGLVGFPSVGKSTLLSVVSS 23 (185)
T ss_dssp CEEEESSTTSSHHHHHHHSEE
T ss_pred EEEEECCCCCCHHHHHHHHHC
T ss_conf 699989999879999999968
No 292
>d1osna_ c.37.1.1 (A:) Thymidine kinase {Varicella-zoster virus [TaxId: 10335]}
Probab=56.35 E-value=2.7 Score=16.03 Aligned_cols=26 Identities=31% Similarity=0.267 Sum_probs=21.9
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHHCC
Q ss_conf 24999958998399999999999199
Q 000823 971 KGILLFGPPGTGKTMLAKAVATEAGA 996 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkAIA~elg~ 996 (1267)
..|.|.|+-|+|||++++.+++.+..
T Consensus 6 lrI~IEG~iGsGKSTl~~~L~~~l~~ 31 (331)
T d1osna_ 6 LRIYLDGAYGIGKTTAAEEFLHHFAI 31 (331)
T ss_dssp EEEEEEESSSSCTTHHHHHHHHTTTT
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHHH
T ss_conf 69999888778899999999998734
No 293
>d1udxa2 c.37.1.8 (A:157-336) Obg GTP-binding protein middle domain {Thermus thermophilus [TaxId: 274]}
Probab=56.18 E-value=2.8 Score=15.96 Aligned_cols=21 Identities=33% Similarity=0.504 Sum_probs=18.8
Q ss_pred EEEEECCCCCHHHHHHHHHHH
Q ss_conf 499995899839999999999
Q 000823 972 GILLFGPPGTGKTMLAKAVAT 992 (1267)
Q Consensus 972 gILL~GPpGTGKT~LAkAIA~ 992 (1267)
.|.|.|.|++|||+|..++..
T Consensus 3 ~VaivG~~nvGKSTLin~L~~ 23 (180)
T d1udxa2 3 DVGLVGYPNAGKSSLLAAMTR 23 (180)
T ss_dssp SEEEECCGGGCHHHHHHHHCS
T ss_pred EEEEECCCCCCHHHHHHHHHC
T ss_conf 899989999989999999968
No 294
>d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=55.61 E-value=3.6 Score=15.09 Aligned_cols=26 Identities=23% Similarity=0.325 Sum_probs=21.7
Q ss_pred CCCEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 98249999589983999999999991
Q 000823 969 PCKGILLFGPPGTGKTMLAKAVATEA 994 (1267)
Q Consensus 969 P~~gILL~GPpGTGKT~LAkAIA~el 994 (1267)
|--.+++.|++|+|||+|...+...-
T Consensus 4 p~~ki~vlG~~~vGKTsLi~~~~~~~ 29 (175)
T d2bmja1 4 PELRLGVLGDARSGKSSLIHRFLTGS 29 (175)
T ss_dssp CEEEEEEECCTTTTHHHHHHHHHHSC
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHCC
T ss_conf 83799999989978999999997197
No 295
>d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit) {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=55.29 E-value=3.6 Score=15.05 Aligned_cols=23 Identities=26% Similarity=0.443 Sum_probs=19.5
Q ss_pred CEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 24999958998399999999999
Q 000823 971 KGILLFGPPGTGKTMLAKAVATE 993 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkAIA~e 993 (1267)
-.++|.|..|+|||+|.+.+...
T Consensus 3 ~KivllG~~~vGKTsl~~r~~~~ 25 (195)
T d1svsa1 3 VKLLLLGAGESGKSTIVKQMKII 25 (195)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHH
T ss_pred EEEEEECCCCCCHHHHHHHHHHC
T ss_conf 69999999998889999988408
No 296
>d1t9ha2 c.37.1.8 (A:68-298) Probable GTPase EngC (YjeQ), C-terminal domain {Bacillus subtilis [TaxId: 1423]}
Probab=54.80 E-value=1.1 Score=18.82 Aligned_cols=32 Identities=34% Similarity=0.488 Sum_probs=23.3
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHHCCCEEEEE
Q ss_conf 24999958998399999999999199569961
Q 000823 971 KGILLFGPPGTGKTMLAKAVATEAGANFINIS 1002 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkAIA~elg~~vi~Id 1002 (1267)
+..+|.|++|+||++|..++........-.++
T Consensus 98 ~~~vl~G~SGVGKSSLiN~L~~~~~~~t~~vs 129 (231)
T d1t9ha2 98 KTTVFAGQSGVGKSSLLNAISPELGLRTNEIS 129 (231)
T ss_dssp SEEEEEESHHHHHHHHHHHHCC----------
T ss_pred CEEEEECCCCCCHHHHHHHHCCHHHHHHCCCC
T ss_conf 64999877873487898751517676403555
No 297
>d1t6na_ c.37.1.19 (A:) Spliceosome RNA helicase BAT1 (UAP56) {Human (Homo sapiens) [TaxId: 9606]}
Probab=54.21 E-value=3.8 Score=14.93 Aligned_cols=17 Identities=29% Similarity=0.376 Sum_probs=13.9
Q ss_pred CEEEEECCCCCHHHHHH
Q ss_conf 24999958998399999
Q 000823 971 KGILLFGPPGTGKTMLA 987 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LA 987 (1267)
+.+++..|+|+|||...
T Consensus 39 ~dvl~~A~TGsGKTla~ 55 (207)
T d1t6na_ 39 MDVLCQAKSGMGKTAVF 55 (207)
T ss_dssp CCEEEECCTTSCHHHHH
T ss_pred CCEEEEECCCCCCCCCC
T ss_conf 98577722333212001
No 298
>d1mkya2 c.37.1.8 (A:173-358) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]}
Probab=53.82 E-value=3.8 Score=14.89 Aligned_cols=23 Identities=26% Similarity=0.501 Sum_probs=20.2
Q ss_pred CEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 24999958998399999999999
Q 000823 971 KGILLFGPPGTGKTMLAKAVATE 993 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkAIA~e 993 (1267)
-.|.|.|.+|+|||+|..++...
T Consensus 9 ~kV~iiG~~~~GKSTLin~l~~~ 31 (186)
T d1mkya2 9 IKVAIVGRPNVGKSTLFNAILNK 31 (186)
T ss_dssp EEEEEECSTTSSHHHHHHHHHTS
T ss_pred CEEEEECCCCCCHHHHHHHHHCC
T ss_conf 88999999999999999999778
No 299
>d1e2ka_ c.37.1.1 (A:) Thymidine kinase {Herpes simplex virus type 1, different strains [TaxId: 10298]}
Probab=53.00 E-value=3.4 Score=15.27 Aligned_cols=26 Identities=23% Similarity=0.369 Sum_probs=19.9
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHHCC
Q ss_conf 24999958998399999999999199
Q 000823 971 KGILLFGPPGTGKTMLAKAVATEAGA 996 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkAIA~elg~ 996 (1267)
..|-|.|+-|+|||++++.++..+..
T Consensus 5 lrI~IEG~iGsGKTTl~~~La~~l~~ 30 (329)
T d1e2ka_ 5 LRVYIDGPHGMGKTTTTQLLVALGSR 30 (329)
T ss_dssp EEEEECSCTTSSHHHHHHHHTC----
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHCC
T ss_conf 29999898677899999999998177
No 300
>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}
Probab=52.22 E-value=4.1 Score=14.71 Aligned_cols=34 Identities=15% Similarity=0.453 Sum_probs=27.9
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHH---CCCEEEEECC
Q ss_conf 249999589983999999999991---9956996111
Q 000823 971 KGILLFGPPGTGKTMLAKAVATEA---GANFINISMS 1004 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkAIA~el---g~~vi~Id~s 1004 (1267)
+.|-++|.=|+|||++|-.+|..+ |..+.-||+-
T Consensus 2 r~Iai~gKGGvGKTT~a~nLA~~LA~~G~rVllID~D 38 (269)
T d1cp2a_ 2 RQVAIYGKGGIGKSTTTQNLTSGLHAMGKTIMVVGCD 38 (269)
T ss_dssp EEEEEEECTTSSHHHHHHHHHHHHHTTTCCEEEEEEC
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECC
T ss_conf 7999989985779999999999999689958999637
No 301
>d1puia_ c.37.1.8 (A:) Probable GTPase EngB {Escherichia coli [TaxId: 562]}
Probab=52.07 E-value=2.8 Score=15.96 Aligned_cols=22 Identities=14% Similarity=0.268 Sum_probs=19.5
Q ss_pred CEEEEECCCCCHHHHHHHHHHH
Q ss_conf 2499995899839999999999
Q 000823 971 KGILLFGPPGTGKTMLAKAVAT 992 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkAIA~ 992 (1267)
..|.|.|+|++|||+|.+++..
T Consensus 17 ~~I~lvG~~NvGKSSL~n~L~~ 38 (188)
T d1puia_ 17 IEVAFAGRSNAGKSSALNTLTN 38 (188)
T ss_dssp EEEEEEECTTSSHHHHHTTTCC
T ss_pred CEEEEECCCCCCHHHHHHHHHC
T ss_conf 7899988999989999999858
No 302
>d1nija1 c.37.1.10 (A:2-223) Hypothetical protein YjiA, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=52.05 E-value=4.1 Score=14.69 Aligned_cols=26 Identities=38% Similarity=0.487 Sum_probs=22.0
Q ss_pred CCCEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 98249999589983999999999991
Q 000823 969 PCKGILLFGPPGTGKTMLAKAVATEA 994 (1267)
Q Consensus 969 P~~gILL~GPpGTGKT~LAkAIA~el 994 (1267)
|..-.+|.|.-|+|||++.+.+.+..
T Consensus 2 ~iPv~iitGFLGaGKTTll~~lL~~~ 27 (222)
T d1nija1 2 PIAVTLLTGFLGAGKTTLLRHILNEQ 27 (222)
T ss_dssp CEEEEEEEESSSSSCHHHHHHHHHSC
T ss_pred CCCEEEEEECCCCCHHHHHHHHHHCC
T ss_conf 97889986488899999999998567
No 303
>d1j3ba1 c.91.1.1 (A:212-529) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Thermus thermophilus [TaxId: 274]}
Probab=50.91 E-value=3.3 Score=15.36 Aligned_cols=21 Identities=14% Similarity=0.504 Sum_probs=10.2
Q ss_pred HHHHHHHHHHHHHHCCEEEEEE
Q ss_conf 8899999999857199099983
Q 000823 479 IYQEMLAKALAHYFGAKLLIFD 500 (1267)
Q Consensus 479 ~Yqe~LaKALA~~f~a~LL~lD 500 (1267)
-|-++|.+-+.++ +++--++-
T Consensus 194 ~ya~lL~~ki~~~-~~~~~LvN 214 (318)
T d1j3ba1 194 VYARMLGEKIRKH-APRVYLVN 214 (318)
T ss_dssp HHHHHHHHHHHHH-CCEEEEEE
T ss_pred HHHHHHHHHHHHC-CCCEEEEE
T ss_conf 6899999999866-97489970
No 304
>d2olra1 c.91.1.1 (A:228-540) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Escherichia coli [TaxId: 562]}
Probab=50.23 E-value=4.2 Score=14.63 Aligned_cols=16 Identities=19% Similarity=0.121 Sum_probs=6.3
Q ss_pred CCCEEEECCCCHHHHH
Q ss_conf 8973997079878899
Q 000823 788 FPNKVTIHMPQDEALL 803 (1267)
Q Consensus 788 Fp~~IeI~LPdeE~RL 803 (1267)
|..+|....|.+.+.+
T Consensus 182 fg~PFl~~~p~~ya~l 197 (313)
T d2olra1 182 FGAAFLSLHPTQYAEV 197 (313)
T ss_dssp GCGGGCSSCHHHHHHH
T ss_pred CCCCCCCCCHHHHHHH
T ss_conf 5654556667889999
No 305
>d1w1wa_ c.37.1.12 (A:) Smc head domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=49.45 E-value=4.4 Score=14.41 Aligned_cols=26 Identities=15% Similarity=0.265 Sum_probs=19.2
Q ss_pred CCCC-EEEECCCCCHHHHHHHHHHHHHHH
Q ss_conf 8991-364068970588999999998571
Q 000823 465 VNPR-ILLSGPAGSEIYQEMLAKALAHYF 492 (1267)
Q Consensus 465 ~s~r-ILLsgp~GsE~Yqe~LaKALA~~f 492 (1267)
..++ -++.||-| -++..+.-|+.=-|
T Consensus 23 ~~~~l~~i~G~NG--sGKS~ileAi~~~l 49 (427)
T d1w1wa_ 23 GESNFTSIIGPNG--SGKSNMMDAISFVL 49 (427)
T ss_dssp TTCSEEEEECSTT--SSHHHHHHHHHHHT
T ss_pred CCCCEEEEECCCC--CCHHHHHHHHHHHH
T ss_conf 9999899999999--98899999999985
No 306
>d1tq4a_ c.37.1.8 (A:) Interferon-inducible GTPase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=48.90 E-value=4.5 Score=14.35 Aligned_cols=23 Identities=17% Similarity=0.388 Sum_probs=20.0
Q ss_pred CCEEEEECCCCCHHHHHHHHHHH
Q ss_conf 82499995899839999999999
Q 000823 970 CKGILLFGPPGTGKTMLAKAVAT 992 (1267)
Q Consensus 970 ~~gILL~GPpGTGKT~LAkAIA~ 992 (1267)
+..|.+.|.||+||++|..+|..
T Consensus 56 ~l~Iai~G~~n~GKSSLiNaL~G 78 (400)
T d1tq4a_ 56 VLNVAVTGETGSGKSSFINTLRG 78 (400)
T ss_dssp CEEEEEEECTTSSHHHHHHHHHT
T ss_pred CCEEEEECCCCCCHHHHHHHHHC
T ss_conf 71799989999978999999958
No 307
>d2jdid3 c.37.1.11 (D:82-357) Central domain of beta subunit of F1 ATP synthase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=46.45 E-value=4.9 Score=14.08 Aligned_cols=24 Identities=38% Similarity=0.535 Sum_probs=21.3
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 249999589983999999999991
Q 000823 971 KGILLFGPPGTGKTMLAKAVATEA 994 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkAIA~el 994 (1267)
..++|+|++|+|||+|+..+++..
T Consensus 69 Qr~~If~~~g~GKt~l~~~i~~~~ 92 (276)
T d2jdid3 69 GKIGLFGGAGVGKTVLIMELINNV 92 (276)
T ss_dssp CEEEEEECTTSSHHHHHHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHHHHH
T ss_conf 877766799989899999999988
No 308
>d1gm5a3 c.37.1.19 (A:286-549) RecG helicase domain {Thermotoga maritima [TaxId: 2336]}
Probab=46.32 E-value=4.9 Score=14.07 Aligned_cols=35 Identities=29% Similarity=0.332 Sum_probs=25.0
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHH---CCCEEEEECCC
Q ss_conf 249999589983999999999991---99569961110
Q 000823 971 KGILLFGPPGTGKTMLAKAVATEA---GANFINISMSS 1005 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkAIA~el---g~~vi~Id~se 1005 (1267)
...||.|..|+|||.++-..+... |..+.-+-..+
T Consensus 105 m~rLL~GdvGSGKT~Va~~a~~~~~~~g~q~~~m~Pt~ 142 (264)
T d1gm5a3 105 MNRLLQGDVGSGKTVVAQLAILDNYEAGFQTAFMVPTS 142 (264)
T ss_dssp CCCEEECCSSSSHHHHHHHHHHHHHHHTSCEEEECSCH
T ss_pred CEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEEEHH
T ss_conf 31566635355665999999999885135505874047
No 309
>d1ii2a1 c.91.1.1 (A:201-523) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Trypanosoma cruzi [TaxId: 5693]}
Probab=45.23 E-value=5.1 Score=13.95 Aligned_cols=14 Identities=21% Similarity=0.342 Sum_probs=5.9
Q ss_pred EEECCCCCHHHHHHHH
Q ss_conf 6406897058899999
Q 000823 470 LLSGPAGSEIYQEMLA 485 (1267)
Q Consensus 470 LLsgp~GsE~Yqe~La 485 (1267)
|+-|.+| -.+.+|.
T Consensus 18 lfFGLSG--TGKTTLs 31 (323)
T d1ii2a1 18 VFFGLSG--TGKTTLS 31 (323)
T ss_dssp EEECCTT--SSHHHHH
T ss_pred EEECCCC--CCCCCCE
T ss_conf 9973677--8812051
No 310
>d1lkxa_ c.37.1.9 (A:) Myosin S1, motor domain {Dictyostelium discoideum, class-I myosin MyoE [TaxId: 44689]}
Probab=45.22 E-value=5.1 Score=13.95 Aligned_cols=26 Identities=19% Similarity=0.410 Sum_probs=19.9
Q ss_pred CCCCEEEECCCCCHHHHHHHHHHHHHHH
Q ss_conf 8991364068970588999999998571
Q 000823 465 VNPRILLSGPAGSEIYQEMLAKALAHYF 492 (1267)
Q Consensus 465 ~s~rILLsgp~GsE~Yqe~LaKALA~~f 492 (1267)
-++.|++||-+| -++..=+|-+-+|+
T Consensus 85 ~~QsIiisGeSG--sGKTe~~k~il~yL 110 (684)
T d1lkxa_ 85 ENQCVIISGESG--AGKTEASKKIMQFL 110 (684)
T ss_dssp CCEEEEEECSTT--SSHHHHHHHHHHHH
T ss_pred CCEEEEEECCCC--CCHHHHHHHHHHHH
T ss_conf 981899973898--99899999999999
No 311
>d1d0xa2 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain {Dictyostelium discoideum [TaxId: 44689]}
Probab=44.74 E-value=5.2 Score=13.90 Aligned_cols=27 Identities=22% Similarity=0.416 Sum_probs=20.1
Q ss_pred CCCCCEEEECCCCCHHHHHHHHHHHHHHH
Q ss_conf 68991364068970588999999998571
Q 000823 464 TVNPRILLSGPAGSEIYQEMLAKALAHYF 492 (1267)
Q Consensus 464 ~~s~rILLsgp~GsE~Yqe~LaKALA~~f 492 (1267)
--++.|++||-+| -+++.-+|-+-+|+
T Consensus 123 ~~nQsIiisGeSG--aGKTe~~k~il~yL 149 (712)
T d1d0xa2 123 RQNQSLLITGESG--AGKTENTKKVIQYL 149 (712)
T ss_dssp TCCEEEEEECSTT--SSHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCC--CCHHHHHHHHHHHH
T ss_conf 8991699967998--88899999999999
No 312
>g1ii8.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=43.61 E-value=5.4 Score=13.78 Aligned_cols=21 Identities=24% Similarity=0.203 Sum_probs=17.5
Q ss_pred CCEEEECCCCCHHHHHHHHHHHH
Q ss_conf 91364068970588999999998
Q 000823 467 PRILLSGPAGSEIYQEMLAKALA 489 (1267)
Q Consensus 467 ~rILLsgp~GsE~Yqe~LaKALA 489 (1267)
+=.++.||-| .++..+-+||.
T Consensus 24 ~~~vi~G~Ng--sGKTtileAI~ 44 (369)
T g1ii8.1 24 GINLIIGQNG--SGKSSLLDAIL 44 (369)
T ss_dssp EEEEEECCTT--SSHHHHHHHHH
T ss_pred CEEEEECCCC--CCHHHHHHHHH
T ss_conf 8199997899--99999999999
No 313
>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}
Probab=42.03 E-value=5.7 Score=13.61 Aligned_cols=26 Identities=31% Similarity=0.552 Sum_probs=19.2
Q ss_pred CCCCEEEECCCCCHHHHHHHHHHHHHHH
Q ss_conf 8991364068970588999999998571
Q 000823 465 VNPRILLSGPAGSEIYQEMLAKALAHYF 492 (1267)
Q Consensus 465 ~s~rILLsgp~GsE~Yqe~LaKALA~~f 492 (1267)
-++.|++||-+| -+++.=+|-+-+|+
T Consensus 122 ~~QsIiisGeSG--aGKTe~~K~il~yL 147 (794)
T d2mysa2 122 ENQSILITGESG--AGKTVNTKRVIQYF 147 (794)
T ss_dssp CCEEEEEEECTT--SCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCC--CCHHHHHHHHHHHH
T ss_conf 980799971798--87899999999999
No 314
>d1qhla_ c.37.1.12 (A:) Cell division protein MukB {Escherichia coli [TaxId: 562]}
Probab=40.99 E-value=2.5 Score=16.34 Aligned_cols=24 Identities=29% Similarity=0.210 Sum_probs=21.1
Q ss_pred EEEEECCCCCHHHHHHHHHHHHHC
Q ss_conf 499995899839999999999919
Q 000823 972 GILLFGPPGTGKTMLAKAVATEAG 995 (1267)
Q Consensus 972 gILL~GPpGTGKT~LAkAIA~elg 995 (1267)
-.+|+||-|+|||++..||...+.
T Consensus 26 ~tvi~G~NGsGKStil~Ai~~~L~ 49 (222)
T d1qhla_ 26 VTTLSGGNGAGKSTTMAAFVTALI 49 (222)
T ss_dssp HHHHHSCCSHHHHHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHHHHC
T ss_conf 089988999987999999999966
No 315
>d2c78a3 c.37.1.8 (A:9-212) Elongation factor Tu (EF-Tu), N-terminal (G) domain {Thermus thermophilus [TaxId: 274]}
Probab=40.34 E-value=6 Score=13.43 Aligned_cols=27 Identities=33% Similarity=0.364 Sum_probs=22.5
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 898249999589983999999999991
Q 000823 968 KPCKGILLFGPPGTGKTMLAKAVATEA 994 (1267)
Q Consensus 968 kP~~gILL~GPpGTGKT~LAkAIA~el 994 (1267)
+|.-++-+.|.++.|||+|+.+|...+
T Consensus 1 k~~ini~iiGhvd~GKSTL~~~Ll~~~ 27 (204)
T d2c78a3 1 KPHVNVGTIGHVDHGKTTLTAALTYVA 27 (204)
T ss_dssp CCEEEEEEECSTTSSHHHHHHHHHHHH
T ss_pred CCCEEEEEEECCCCCHHHHHHHHHHHH
T ss_conf 997199999478984999999999985
No 316
>d1e69a_ c.37.1.12 (A:) Smc head domain {Thermotoga maritima [TaxId: 2336]}
Probab=40.07 E-value=5.5 Score=13.71 Aligned_cols=49 Identities=18% Similarity=0.248 Sum_probs=27.1
Q ss_pred HHCCCEEEEECCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCC
Q ss_conf 7129917999352122138999843799999988655421688656777689999439999995
Q 000823 1026 SKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDTERILVLAATNRPFDLD 1089 (1267)
Q Consensus 1026 ~k~~PsIIiIDEID~L~~~r~~~~~~~a~~~il~~LL~~ldgl~~~~~~~VlVIaTTN~p~~Ld 1089 (1267)
....+.+++|||+|.-+ .....+++...+... ..+.-||.||..|..++
T Consensus 238 ~~~~~~~~~iDEpe~~L-------hp~~~~~l~~~l~~~--------~~~~QviitTHsp~~~~ 286 (308)
T d1e69a_ 238 EIKPSPFYVLDEVDSPL-------DDYNAERFKRLLKEN--------SKHTQFIVITHNKIVME 286 (308)
T ss_dssp TTSCCSEEEEESCCSSC-------CHHHHHHHHHHHHHH--------TTTSEEEEECCCTTGGG
T ss_pred HHCCCCHHHHHHCCCCC-------CHHHHHHHHHHHHHH--------CCCCEEEEEECCHHHHH
T ss_conf 42267445543203357-------978999999999985--------54887999989889997
No 317
>d1br2a2 c.37.1.9 (A:80-789) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}
Probab=39.21 E-value=6.2 Score=13.31 Aligned_cols=26 Identities=23% Similarity=0.369 Sum_probs=19.0
Q ss_pred CCCCEEEECCCCCHHHHHHHHHHHHHHH
Q ss_conf 8991364068970588999999998571
Q 000823 465 VNPRILLSGPAGSEIYQEMLAKALAHYF 492 (1267)
Q Consensus 465 ~s~rILLsgp~GsE~Yqe~LaKALA~~f 492 (1267)
-++.|++||-.| -+++.=+|-+-+|+
T Consensus 90 ~~Q~IiisGeSG--aGKTe~~k~il~yL 115 (710)
T d1br2a2 90 EDQSILCTGESG--AGKTENTKKVIQYL 115 (710)
T ss_dssp CCEEEEEECSTT--SSHHHHHHHHHHHH
T ss_pred CCCEEEEEECCC--CCHHHHHHHHHHHH
T ss_conf 991799971898--88899999999999
No 318
>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}
Probab=38.65 E-value=6.4 Score=13.25 Aligned_cols=27 Identities=22% Similarity=0.341 Sum_probs=19.4
Q ss_pred CCCCEEEECCCCCHHHHHHHHHHHHHHHC
Q ss_conf 89913640689705889999999985719
Q 000823 465 VNPRILLSGPAGSEIYQEMLAKALAHYFG 493 (1267)
Q Consensus 465 ~s~rILLsgp~GsE~Yqe~LaKALA~~f~ 493 (1267)
-++.|++||-+| -+++.-+|-+-+|+-
T Consensus 120 ~nQ~IiisGESG--aGKTe~~K~il~yL~ 146 (789)
T d1kk8a2 120 ENQSCLITGESG--AGKTENTKKVIMYLA 146 (789)
T ss_dssp SEEEEEEECSTT--SSHHHHHHHHHHHHH
T ss_pred CCCEEEEEECCC--CCHHHHHHHHHHHHH
T ss_conf 994799970899--987999999999999
No 319
>g1qhh.1 c.37.1.19 (A:,B:,C:,D:) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]}
Probab=38.58 E-value=6.4 Score=13.24 Aligned_cols=34 Identities=24% Similarity=0.132 Sum_probs=19.4
Q ss_pred CEEEECCCCCHHHHHHHHHHHHHHHCCEEEEEEC
Q ss_conf 1364068970588999999998571990999834
Q 000823 468 RILLSGPAGSEIYQEMLAKALAHYFGAKLLIFDS 501 (1267)
Q Consensus 468 rILLsgp~GsE~Yqe~LaKALA~~f~a~LL~lD~ 501 (1267)
.|+.----.+..-|..+.++|+....--+++-|.
T Consensus 216 ~i~vDE~QD~~~~q~~~~~~l~~~~~~l~~~gd~ 249 (623)
T g1qhh.1 216 YIHIDEYQDTNRAQYTLVKKLAERFQNICAVGDA 249 (623)
T ss_dssp EEEESCGGGCCHHHHHHHHHHHTTTCCEEEEECG
T ss_pred EEECCCCCCCHHHHHHHHHHHHCCCCCEEEEECC
T ss_conf 7640234541578999999973455747985046
No 320
>d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]}
Probab=33.13 E-value=7.7 Score=12.64 Aligned_cols=26 Identities=35% Similarity=0.501 Sum_probs=17.9
Q ss_pred CCCCEEEECCCCCHHHHHHHHHHHHHHH
Q ss_conf 8991364068970588999999998571
Q 000823 465 VNPRILLSGPAGSEIYQEMLAKALAHYF 492 (1267)
Q Consensus 465 ~s~rILLsgp~GsE~Yqe~LaKALA~~f 492 (1267)
-++.|++||-.| -+++.-+|-+-+|+
T Consensus 93 ~~Q~IiisGeSG--sGKTe~~k~il~~l 118 (730)
T d1w7ja2 93 RNQSIIVSGESG--AGKTVSAKYAMRYF 118 (730)
T ss_dssp CCEEEEEECSTT--SSHHHHHHHHHHHH
T ss_pred CCEEEEEEECCC--CCHHHHHHHHHHHH
T ss_conf 980799971799--98799999999999
No 321
>d2afhe1 c.37.1.10 (E:1-289) Nitrogenase iron protein {Azotobacter vinelandii [TaxId: 354]}
Probab=33.05 E-value=7.7 Score=12.63 Aligned_cols=33 Identities=15% Similarity=0.401 Sum_probs=25.2
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHH---CCCEEEEEC
Q ss_conf 249999589983999999999991---995699611
Q 000823 971 KGILLFGPPGTGKTMLAKAVATEA---GANFINISM 1003 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkAIA~el---g~~vi~Id~ 1003 (1267)
+-|-++|.=|+|||+++-.+|..+ |..+.-||+
T Consensus 3 r~IaisgKGGVGKTT~a~NLA~~LA~~G~rVLlID~ 38 (289)
T d2afhe1 3 RQCAIYGKGGIGKSTTTQNLVAALAEMGKKVMIVGC 38 (289)
T ss_dssp EEEEEEECTTSSHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEC
T ss_conf 289998999877999999999999978997899951
No 322
>d1z63a1 c.37.1.19 (A:432-661) Helicase of the SNF2/Rad54 hamily {Sulfolobus solfataricus [TaxId: 2287]}
Probab=30.48 E-value=8.4 Score=12.33 Aligned_cols=71 Identities=24% Similarity=0.217 Sum_probs=41.2
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHH-----CCCEEEEECCCCCHHCCCCCH------------------------------
Q ss_conf 249999589983999999999991-----995699611100010027518------------------------------
Q 000823 971 KGILLFGPPGTGKTMLAKAVATEA-----GANFINISMSSITSKWFGEGE------------------------------ 1015 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkAIA~el-----g~~vi~Id~seL~s~~~Ge~e------------------------------ 1015 (1267)
.|.||.=++|.|||..+-+++..+ ..+++-+....+...|..+..
T Consensus 32 ~g~iLaDe~GlGKT~~~i~~~~~~~~~~~~~~~LIv~p~~l~~~W~~e~~~~~~~~~~~~~~~~~~~~~~~~~~vvi~~~ 111 (230)
T d1z63a1 32 FGICLADDMGLGKTLQTIAVFSDAKKENELTPSLVICPLSVLKNWEEELSKFAPHLRFAVFHEDRSKIKLEDYDIILTTY 111 (230)
T ss_dssp CCEEECCCTTSCHHHHHHHHHHHHHHTTCCSSEEEEECSTTHHHHHHHHHHHCTTSCEEECSSSTTSCCGGGSSEEEEEH
T ss_pred CCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCEECCHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHCCCCCEEEEEH
T ss_conf 98799858998869999873554421235564411053554267777777640254410101421000025768898549
Q ss_pred HHHHHHHHHHHHCCCEEEEECCCHHHH
Q ss_conf 999999999871299179993521221
Q 000823 1016 KYVKAVFSLASKIAPSVIFVDEVDSML 1042 (1267)
Q Consensus 1016 k~I~~iF~~A~k~~PsIIiIDEID~L~ 1042 (1267)
..+.. +..........|++||.+.+-
T Consensus 112 ~~~~~-~~~l~~~~~~~vI~DEah~~k 137 (230)
T d1z63a1 112 AVLLR-DTRLKEVEWKYIVIDEAQNIK 137 (230)
T ss_dssp HHHTT-CHHHHTCCEEEEEEETGGGGS
T ss_pred HHHHH-HHHHHCCCCEEEEEEHHHCCC
T ss_conf 99986-888741651399997100344
No 323
>d1bg2a_ c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId: 9606]}
Probab=29.71 E-value=8.7 Score=12.24 Aligned_cols=17 Identities=29% Similarity=0.493 Sum_probs=9.8
Q ss_pred CEEEEECCCCCHHHHHH
Q ss_conf 24999958998399999
Q 000823 971 KGILLFGPPGTGKTMLA 987 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LA 987 (1267)
..++-||++|+|||+..
T Consensus 77 ~~i~aYGqtgSGKTyT~ 93 (323)
T d1bg2a_ 77 GTIFAYGQTSSGKTHTM 93 (323)
T ss_dssp EEEEEECSTTSSHHHHH
T ss_pred CCEEEECCCCCCCCEEC
T ss_conf 64231014688773312
No 324
>d1ni3a1 c.37.1.8 (A:11-306) YchF GTP-binding protein N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=27.11 E-value=9.6 Score=11.92 Aligned_cols=34 Identities=21% Similarity=0.327 Sum_probs=25.9
Q ss_pred CEEEEECCCCCHHHHHHHHHHHH-----HCCCEEEEECC
Q ss_conf 24999958998399999999999-----19956996111
Q 000823 971 KGILLFGPPGTGKTMLAKAVATE-----AGANFINISMS 1004 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkAIA~e-----lg~~vi~Id~s 1004 (1267)
.-+=|.|.|.+|||+|-.++... .++||..++..
T Consensus 11 ~kiGivG~Pn~GKSTlfnalT~~~~~~~anypftTi~pn 49 (296)
T d1ni3a1 11 LKTGIVGMPNVGKSTFFRAITKSVLGNPANYPYATIDPE 49 (296)
T ss_dssp CEEEEEECSSSSHHHHHHHHHHSTTTSTTCCSSCCCCTT
T ss_pred CEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC
T ss_conf 379997899998999999997789877478996670387
No 325
>d1dm9a_ d.66.1.3 (A:) Heat shock protein 15 kD {Escherichia coli [TaxId: 562]}
Probab=26.16 E-value=9.9 Score=11.80 Aligned_cols=35 Identities=14% Similarity=0.143 Sum_probs=26.8
Q ss_pred CCC-EEECCEEECCCCEEECCCCCEEEEEECCCEEEEEE
Q ss_conf 873-69868460688815734898999912487379987
Q 000823 189 SKG-LQVNGKNLKKNTSCELRSGDEVVFGSLGNHAYIFQ 226 (1267)
Q Consensus 189 ~nG-t~VNg~~igk~~~~~L~~gDeI~f~~~~~~aYiF~ 226 (1267)
.+| |.|||..+ | .+..++-||.|.+..... .+++.
T Consensus 28 ~~G~V~vNg~~v-K-ps~~vk~GDvI~i~~~~~-~~~i~ 63 (104)
T d1dm9a_ 28 EGGKVHYNGQRS-K-PSKIVELNATLTLRQGND-ERTVI 63 (104)
T ss_dssp HTTCEEETTEEC-C-TTCBCCTTCEEEEEETTE-EEEEE
T ss_pred HCCCEEECCEEC-C-CCCCCCCCCEEEEEECCE-EEEEE
T ss_conf 839715487414-5-555689999999986894-88999
No 326
>d2jdia3 c.37.1.11 (A:95-379) Central domain of alpha subunit of F1 ATP synthase {Cow (Bos taurus) [TaxId: 9913]}
Probab=24.43 E-value=11 Score=11.58 Aligned_cols=23 Identities=30% Similarity=0.368 Sum_probs=19.4
Q ss_pred CEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 24999958998399999999999
Q 000823 971 KGILLFGPPGTGKTMLAKAVATE 993 (1267)
Q Consensus 971 ~gILL~GPpGTGKT~LAkAIA~e 993 (1267)
..++|+|++|+|||.++..++..
T Consensus 69 Qr~~If~~~g~GKt~ll~~~~~~ 91 (285)
T d2jdia3 69 QRELIIGDRQTGKTSIAIDTIIN 91 (285)
T ss_dssp CBCEEEESTTSSHHHHHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHHHH
T ss_conf 77876568888858999999975
No 327
>d1rifa_ c.37.1.23 (A:) DNA helicase UvsW {Bacteriophage T4 [TaxId: 10665]}
Probab=24.13 E-value=11 Score=11.54 Aligned_cols=41 Identities=20% Similarity=0.181 Sum_probs=27.7
Q ss_pred CCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 0140999999999985725762566308988898249999589983999999999991
Q 000823 937 IGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEA 994 (1267)
Q Consensus 937 I~Gle~vk~~L~e~I~~pl~~~e~f~k~~~~kP~~gILL~GPpGTGKT~LAkAIA~el 994 (1267)
+...+.+++.+...+.. +..++.-|+|+|||.++-+++..+
T Consensus 112 ~~~rdyQ~~av~~~l~~-----------------~~~il~~pTGsGKT~i~~~i~~~~ 152 (282)
T d1rifa_ 112 IEPHWYQKDAVFEGLVN-----------------RRRILNLPTSAGRSLIQALLARYY 152 (282)
T ss_dssp CCCCHHHHHHHHHHHHH-----------------SEEEECCCTTSCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHC-----------------CCCEEEEECCCCCCHHHHHHHHHH
T ss_conf 65646777877999854-----------------972168871158307889999986
No 328
>d1t5la1 c.37.1.19 (A:2-414) Nucleotide excision repair enzyme UvrB {Bacillus caldotenax [TaxId: 1395]}
Probab=21.46 E-value=12 Score=11.17 Aligned_cols=31 Identities=29% Similarity=0.396 Sum_probs=14.2
Q ss_pred EEEEECCCCCHHHHHHHHHHHHHCCCEEEEE
Q ss_conf 4999958998399999999999199569961
Q 000823 972 GILLFGPPGTGKTMLAKAVATEAGANFINIS 1002 (1267)
Q Consensus 972 gILL~GPpGTGKT~LAkAIA~elg~~vi~Id 1002 (1267)
..+|.|-+|+|||.++.+++...+.+++-|.
T Consensus 33 ~q~l~GltGS~ka~~iA~l~~~~~rp~LVVt 63 (413)
T d1t5la1 33 HQTLLGATGTGKTFTISNVIAQVNKPTLVIA 63 (413)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHHTCCEEEEC
T ss_pred CEEEECCCCCHHHHHHHHHHHHHCCCEEEEE
T ss_conf 5899677874899999999997399989994
No 329
>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=20.74 E-value=12 Score=11.07 Aligned_cols=32 Identities=25% Similarity=0.394 Sum_probs=22.5
Q ss_pred EEEEE-CCCCCHHHHHHHHHHHHH---CCCEEEEEC
Q ss_conf 49999-589983999999999991---995699611
Q 000823 972 GILLF-GPPGTGKTMLAKAVATEA---GANFINISM 1003 (1267)
Q Consensus 972 gILL~-GPpGTGKT~LAkAIA~el---g~~vi~Id~ 1003 (1267)
-|.+. |..|+|||++|..+|..+ +..+.-+|+
T Consensus 3 vIav~s~KGGvGKTtia~nlA~~la~~g~~VlliD~ 38 (232)
T d1hyqa_ 3 TITVASGKGGTGKTTITANLGVALAQLGHDVTIVDA 38 (232)
T ss_dssp EEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEC
T ss_conf 999979999980999999999999968998999959
Done!