BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 000824
(1266 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LUS2|TC120_ARATH Translocase of chloroplast 120, chloroplastic OS=Arabidopsis thaliana
GN=TOC120 PE=1 SV=1
Length = 1089
Score = 1270 bits (3286), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 663/894 (74%), Positives = 744/894 (83%), Gaps = 22/894 (2%)
Query: 387 GVDSKHHEETCEVEGTSTDIHEEVVEGTVAPEIGSSH--SLDRPTNQISEKIQAGTMN-- 442
G+D + EE +V S + E G E S S D+ N S ++ AGT++
Sbjct: 204 GIDDEKWEEEIDV---SAGMVTEQRNGKTGAEFNSVKIVSGDKSLND-SIEVAAGTLSPL 259
Query: 443 --SSSE------TQPQQAGEIVCDVHVVAEQAEEKVEMDQEKKRSSTQVTGECNVQPSPQ 494
SSSE +Q G + + +Q + V + E K S + E V S
Sbjct: 260 EKSSSEEKGETESQNSNGGHDIQSNKEIVKQQDSSVNIGPEIKESQ-HMERESEVLSSVS 318
Query: 495 PASSAAKSTTPVNPPARPAGLGRAAPLLEPAPRVVQHPRVNGAISHTQTQPIEDPGNGEA 554
P S +S T PPARPAGLGRAAPLLEPAPRV Q PRVNG +SH Q Q ED E
Sbjct: 319 PTES--RSDTAALPPARPAGLGRAAPLLEPAPRVTQQPRVNGNVSHNQPQQAEDSTTAET 376
Query: 555 EEYDETREKLQMIRVKFLRLAHRLGQTPHNVVVAQVLYRLGLAEQLRGRNGGRVGAFSFD 614
+E+DETREKLQ IRVKFLRL+HRLGQTPHNVVVAQVLYRLGLAEQLRGRNG RVGAFSFD
Sbjct: 377 DEHDETREKLQFIRVKFLRLSHRLGQTPHNVVVAQVLYRLGLAEQLRGRNGSRVGAFSFD 436
Query: 615 RASAMAEQLEAAGQEPLDFSCTIMVLGKTGVGKSATINSIFDEVKFGTDAFQMGTKKVQD 674
RASAMAEQLEAA Q+PLDFSCTIMVLGK+GVGKSATINSIFDE+K TDAFQ+GTKKVQD
Sbjct: 437 RASAMAEQLEAAAQDPLDFSCTIMVLGKSGVGKSATINSIFDELKISTDAFQVGTKKVQD 496
Query: 675 VVGTVQGIKVRVIDTPGLLPSWSDQRQNEKILHSVKRFIKKTPPDIVLYLDRLDMQNRDF 734
+ G VQGIKVRVIDTPGLLPSWSDQ +NEKIL SV+ FIKK+PPDIVLYLDRLDMQ+RD
Sbjct: 497 IEGFVQGIKVRVIDTPGLLPSWSDQHKNEKILKSVRAFIKKSPPDIVLYLDRLDMQSRDS 556
Query: 735 SDMPLLRTITDIFGPSIWFNAIVVLTHAASAPPDGPNGTASSYDMFVTQRSHVVQQAIRQ 794
DMPLLRTITD+FGPSIWFNAIV LTHAASAPPDGPNGTASSYDMFVTQRSHV+QQAIRQ
Sbjct: 557 GDMPLLRTITDVFGPSIWFNAIVGLTHAASAPPDGPNGTASSYDMFVTQRSHVIQQAIRQ 616
Query: 795 AAGDMRLMNPVSLVENHSACRTNRAGQRVLPNGQVWKPHLLLLSFASKILAEANTLLKLQ 854
AAGDMRLMNPVSLVENHSACRTNRAGQRVLPNGQVWKPHLLLLSFASKILAEAN LLKLQ
Sbjct: 617 AAGDMRLMNPVSLVENHSACRTNRAGQRVLPNGQVWKPHLLLLSFASKILAEANALLKLQ 676
Query: 855 DTPPGKPFSTRSRAPPLPFLLSSLLQSRPQVKLPEEQFGDEDSLDDDLDDSSESEDESEF 914
D PG F+TRS+APPLP LLSSLLQSRPQ KLPE+Q D++ +DDLD+SS+SE+ESE+
Sbjct: 677 DNIPGGQFATRSKAPPLPLLLSSLLQSRPQAKLPEQQ-YDDEDDEDDLDESSDSEEESEY 735
Query: 915 DELPPFKRLTKAQVAKLTKAQKRAYFDELEYREKLFMKKQLKEEKKRRKMMKKMAAAAKD 974
DELPPFKRLTKA++ KL+K+QK+ Y DE+EYREKLFMK+Q+KEE+KRRK++KK AA KD
Sbjct: 736 DELPPFKRLTKAEMTKLSKSQKKEYLDEMEYREKLFMKRQMKEERKRRKLLKKFAAEIKD 795
Query: 975 LPSDNSENVEEESGGAASVPVPMPDLALPASFDSDNPTHRYRYLDSSNQWLVRPVLETHG 1034
+P+ SENVEEE ASVPVPMPDL+LPASFDSDNPTHRYRYLD+SNQWLVRPVLETHG
Sbjct: 796 MPNGYSENVEEERSEPASVPVPMPDLSLPASFDSDNPTHRYRYLDTSNQWLVRPVLETHG 855
Query: 1035 WDHDVGYEGINAERLFVVKNKIPVSFSGQVTKDKKDANVQMEVVSSLKHGEGKATSLGFD 1094
WDHD+GYEG+NAERLFVVK+KIPVSFSGQVTKDKKDA+VQ+E+ SS+KHGEG++TSLGFD
Sbjct: 856 WDHDIGYEGVNAERLFVVKDKIPVSFSGQVTKDKKDAHVQLELASSVKHGEGRSTSLGFD 915
Query: 1095 MQTVGKDLAYTLRSETRFSNFRKNKAMAGLSVTHLGDSLSAGVKVEDKLIVNKRFRVVMT 1154
MQ GK+LAYT+RSETRF+ FRKNKA AGLSVT LGDS+SAG+KVEDKLI NKRFR+VM+
Sbjct: 916 MQNAGKELAYTIRSETRFNKFRKNKAAAGLSVTLLGDSVSAGLKVEDKLIANKRFRMVMS 975
Query: 1155 GGAMTSRSDVAYGGSLEAQLRDADYPLGRSLTTLGLSVMDWHGDLAIGCNIQSQVPIGRS 1214
GGAMTSR DVAYGG+LEAQ RD DYPLGR L+TLGLSVMDWHGDLAIG NIQSQVPIGRS
Sbjct: 976 GGAMTSRGDVAYGGTLEAQFRDKDYPLGRFLSTLGLSVMDWHGDLAIGGNIQSQVPIGRS 1035
Query: 1215 TNMIGRANLNNRGAGQVSIRVNSSEQLQLALIGLIPLLKKLLGYS--QQMQLGQ 1266
+N+I RANLNNRGAGQVSIRVNSSEQLQLA++ L+PL KKLL Y +QMQ G
Sbjct: 1036 SNLIARANLNNRGAGQVSIRVNSSEQLQLAVVALVPLFKKLLTYYSPEQMQYGH 1089
>sp|Q9SLF3|TC132_ARATH Translocase of chloroplast 132, chloroplastic OS=Arabidopsis thaliana
GN=TOC132 PE=1 SV=1
Length = 1206
Score = 1269 bits (3284), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 650/830 (78%), Positives = 723/830 (87%), Gaps = 9/830 (1%)
Query: 443 SSSETQPQQAGEIVCDVHVVAEQAEEKVEMDQEKK-RSSTQVTGECNVQPSPQPASSAA- 500
+S E +P Q+ DV + Q +++E Q + ++T +V+ P+ SS +
Sbjct: 380 TSREHKPVQSANGGHDVQ--SPQPNKELEKQQSSRVHVDPEITENSHVETEPEVVSSVSP 437
Query: 501 ---KSTTPVNPPARPAGLGRAAPLLEPAPRVVQHPRVNGAISHTQTQPIEDPGNGEAEEY 557
+S PPARPAGLGRA+PLLEPA R Q RVNG SH Q Q ED EA+E+
Sbjct: 438 TESRSNPAALPPARPAGLGRASPLLEPASRAPQQSRVNGNGSHNQFQQAEDSTTTEADEH 497
Query: 558 DETREKLQMIRVKFLRLAHRLGQTPHNVVVAQVLYRLGLAEQLRGRNGGRVGAFSFDRAS 617
DETREKLQ+IRVKFLRLAHRLGQTPHNVVVAQVLYRLGLAEQLRGRNG RVGAFSFDRAS
Sbjct: 498 DETREKLQLIRVKFLRLAHRLGQTPHNVVVAQVLYRLGLAEQLRGRNGSRVGAFSFDRAS 557
Query: 618 AMAEQLEAAGQEPLDFSCTIMVLGKTGVGKSATINSIFDEVKFGTDAFQMGTKKVQDVVG 677
AMAEQLEAAGQ+PLDFSCTIMVLGK+GVGKSATINSIFDEVKF TDAFQMGTK+VQDV G
Sbjct: 558 AMAEQLEAAGQDPLDFSCTIMVLGKSGVGKSATINSIFDEVKFCTDAFQMGTKRVQDVEG 617
Query: 678 TVQGIKVRVIDTPGLLPSWSDQRQNEKILHSVKRFIKKTPPDIVLYLDRLDMQNRDFSDM 737
VQGIKVRVIDTPGLLPSWSDQ +NEKIL+SVK FIKK PPDIVLYLDRLDMQ+RD DM
Sbjct: 618 LVQGIKVRVIDTPGLLPSWSDQAKNEKILNSVKAFIKKNPPDIVLYLDRLDMQSRDSGDM 677
Query: 738 PLLRTITDIFGPSIWFNAIVVLTHAASAPPDGPNGTASSYDMFVTQRSHVVQQAIRQAAG 797
PLLRTI+D+FGPSIWFNAIV LTHAAS PPDGPNGTASSYDMFVTQRSHV+QQAIRQAAG
Sbjct: 678 PLLRTISDVFGPSIWFNAIVGLTHAASVPPDGPNGTASSYDMFVTQRSHVIQQAIRQAAG 737
Query: 798 DMRLMNPVSLVENHSACRTNRAGQRVLPNGQVWKPHLLLLSFASKILAEANTLLKLQDTP 857
DMRLMNPVSLVENHSACRTNRAGQRVLPNGQVWKPHLLLLSFASKILAEAN LLKLQD
Sbjct: 738 DMRLMNPVSLVENHSACRTNRAGQRVLPNGQVWKPHLLLLSFASKILAEANALLKLQDNI 797
Query: 858 PGKPFSTRSRAPPLPFLLSSLLQSRPQVKLPEEQFGDEDSLDDDLDDSSESEDESEFDEL 917
PG+PF+ RS+APPLPFLLSSLLQSRPQ KLPE+Q+GDE+ +DDL++SS+S++ESE+D+L
Sbjct: 798 PGRPFAARSKAPPLPFLLSSLLQSRPQPKLPEQQYGDEED-EDDLEESSDSDEESEYDQL 856
Query: 918 PPFKRLTKAQVAKLTKAQKRAYFDELEYREKLFMKKQLKEEKKRRKMMKKMAAAAKDLPS 977
PPFK LTKAQ+A L+K+QK+ Y DE+EYREKL MKKQ+KEE+KRRKM KK AA KDLP
Sbjct: 857 PPFKSLTKAQMATLSKSQKKQYLDEMEYREKLLMKKQMKEERKRRKMFKKFAAEIKDLPD 916
Query: 978 DNSENVEEESGGAASVPVPMPDLALPASFDSDNPTHRYRYLDSSNQWLVRPVLETHGWDH 1037
SENVEEESGG ASVPVPMPDL+LPASFDSDNPTHRYRYLDSSNQWLVRPVLETHGWDH
Sbjct: 917 GYSENVEEESGGPASVPVPMPDLSLPASFDSDNPTHRYRYLDSSNQWLVRPVLETHGWDH 976
Query: 1038 DVGYEGINAERLFVVKNKIPVSFSGQVTKDKKDANVQMEVVSSLKHGEGKATSLGFDMQT 1097
D+GYEG+NAERLFVVK KIP+S SGQVTKDKKDANVQ+E+ SS+KHGEGK+TSLGFDMQT
Sbjct: 977 DIGYEGVNAERLFVVKEKIPISVSGQVTKDKKDANVQLEMASSVKHGEGKSTSLGFDMQT 1036
Query: 1098 VGKDLAYTLRSETRFSNFRKNKAMAGLSVTHLGDSLSAGVKVEDKLIVNKRFRVVMTGGA 1157
VGK+LAYTLRSETRF+NFR+NKA AGLSVTHLGDS+SAG+KVEDK I +K FR+VM+GGA
Sbjct: 1037 VGKELAYTLRSETRFNNFRRNKAAAGLSVTHLGDSVSAGLKVEDKFIASKWFRIVMSGGA 1096
Query: 1158 MTSRSDVAYGGSLEAQLRDADYPLGRSLTTLGLSVMDWHGDLAIGCNIQSQVPIGRSTNM 1217
MTSR D AYGG+LEAQLRD DYPLGR LTTLGLSVMDWHGDLAIG NIQSQVPIGRS+N+
Sbjct: 1097 MTSRGDFAYGGTLEAQLRDKDYPLGRFLTTLGLSVMDWHGDLAIGGNIQSQVPIGRSSNL 1156
Query: 1218 IGRANLNNRGAGQVSIRVNSSEQLQLALIGLIPLLKKLLGYSQ-QMQLGQ 1266
I RANLNNRGAGQVS+RVNSSEQLQLA++ ++PL KKLL Y Q Q GQ
Sbjct: 1157 IARANLNNRGAGQVSVRVNSSEQLQLAMVAIVPLFKKLLSYYYPQTQYGQ 1206
>sp|O81283|TC159_ARATH Translocase of chloroplast 159, chloroplastic OS=Arabidopsis thaliana
GN=TOC159 PE=1 SV=1
Length = 1503
Score = 765 bits (1975), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/757 (51%), Positives = 513/757 (67%), Gaps = 28/757 (3%)
Query: 511 RPAGLGRAAPLLEPAPRVVQHPRVNGA--ISHTQTQPIEDPGNGEAEEYDETREKLQMIR 568
RPAGL + L+PA PR N + S++ ++ +EE + EKLQ +R
Sbjct: 739 RPAGLSSSLRPLKPA----AAPRANRSNIFSNSNVTMADETEINLSEEEKQKLEKLQSLR 794
Query: 569 VKFLRLAHRLGQTPHNVVVAQVLYRLGLAEQLRGRNGGRVGAFSFDRASAMAEQLEAAGQ 628
VKFLRL RLG + + + AQVLYRL L L GR G++ FS D A A + EA G
Sbjct: 795 VKFLRLLQRLGHSAEDSIAAQVLYRLAL---LAGRQAGQL--FSLDAAKKKAVESEAEGN 849
Query: 629 EPLDFSCTIMVLGKTGVGKSATINSIFDEVKFGTDAFQMGTKKVQDVVGTVQGIKVRVID 688
E L FS I+VLGK GVGKSATINSI DAF + T V+++ GTV G+K+ ID
Sbjct: 850 EELIFSLNILVLGKAGVGKSATINSILGNQIASIDAFGLSTTSVREISGTVNGVKITFID 909
Query: 689 TPGLLPSWSDQRQNEKILHSVKRFIKKTPPDIVLYLDRLDMQNRDFSDMPLLRTITDIFG 748
TPGL + DQ N K+L SVK+ +KK PPDIVLY+DRLD Q RD +++PLLRTIT G
Sbjct: 910 TPGLKSAAMDQSTNAKMLSSVKKVMKKCPPDIVLYVDRLDTQTRDLNNLPLLRTITASLG 969
Query: 749 PSIWFNAIVVLTHAASAPPDGPNGTASSYDMFVTQRSHVVQQAIRQAAGDMRLMNP---- 804
SIW NAIV LTHAASAPPDGP+GT SYD+FV Q SH+VQQ+I QA GD+RLMNP
Sbjct: 970 TSIWKNAIVTLTHAASAPPDGPSGTPLSYDVFVAQCSHIVQQSIGQAVGDLRLMNPSLMN 1029
Query: 805 -VSLVENHSACRTNRAGQRVLPNGQVWKPHLLLLSFASKILAEANTLLKLQD-TPPGKPF 862
VSLVENH CR NR G +VLPNGQ W+ LLLL ++ K+L+E N+LL+ Q+ K F
Sbjct: 1030 PVSLVENHPLCRKNREGVKVLPNGQTWRSQLLLLCYSLKVLSETNSLLRPQEPLDHRKVF 1089
Query: 863 STRSRAPPLPFLLSSLLQSRPQVKLPEEQFGDEDSLDDDLDDSSESEDES----EFDELP 918
R R+PPLP+LLS LLQSR KLP +Q GD D ++DD S+SE E E+D+LP
Sbjct: 1090 GFRVRSPPLPYLLSWLLQSRAHPKLPGDQGGDSVDSDIEIDDVSDSEQEDGEDDEYDQLP 1149
Query: 919 PFKRLTKAQVAKLTKAQKRAYFDELEYREKLFMKKQLKEEKKRRKMMKK----MAAAAKD 974
PFK L K Q+AKL+ Q++AYF+E +YR KL KKQ +EE KR K MKK + +
Sbjct: 1150 PFKPLRKTQLAKLSNEQRKAYFEEYDYRVKLLQKKQWREELKRMKEMKKNGKKLGESEFG 1209
Query: 975 LPSDNSENVEEESGGAASVPVPMPDLALPASFDSDNPTHRYRYLDSSNQWLVRPVLETHG 1034
P E + E+G A+VPVP+PD+ LP SFDSDN +RYRYL+ ++Q L RPVL+THG
Sbjct: 1210 YPG---EEDDPENGAPAAVPVPLPDMVLPPSFDSDNSAYRYRYLEPTSQLLTRPVLDTHG 1266
Query: 1035 WDHDVGYEGINAERLFVVKNKIPVSFSGQVTKDKKDANVQMEVVSSLKHGEGKATSLGFD 1094
WDHD GY+G+NAE + ++ P + + QVTKDKK+ N+ ++ S KHGE +T GFD
Sbjct: 1267 WDHDCGYDGVNAEHSLALASRFPATATVQVTKDKKEFNIHLDSSVSAKHGENGSTMAGFD 1326
Query: 1095 MQTVGKDLAYTLRSETRFSNFRKNKAMAGLSVTHLGDSLSAGVKVEDKLIVNKRFRVVMT 1154
+Q VGK LAY +R ET+F N RKNK G SVT LG++++ GVK+ED++ + KR +V +
Sbjct: 1327 IQNVGKQLAYVVRGETKFKNLRKNKTTVGGSVTFLGENIATGVKLEDQIALGKRLVLVGS 1386
Query: 1155 GGAMTSRSDVAYGGSLEAQLRDADYPLGRSLTTLGLSVMDWHGDLAIGCNIQSQVPIGRS 1214
G M S+ D AYG +LE +LR+AD+P+G+ ++ GLS++ W GDLA+G N+QSQV +GR+
Sbjct: 1387 TGTMRSQGDSAYGANLEVRLREADFPIGQDQSSFGLSLVKWRGDLALGANLQSQVSVGRN 1446
Query: 1215 TNMIGRANLNNRGAGQVSIRVNSSEQLQLALIGLIPL 1251
+ + RA LNN+ +GQ+++R +SS+QLQ+AL ++P+
Sbjct: 1447 SKIALRAGLNNKMSGQITVRTSSSDQLQIALTAILPI 1483
>sp|Q6S5G3|TOC90_ARATH Translocase of chloroplast 90, chloroplastic OS=Arabidopsis thaliana
GN=TOC90 PE=1 SV=1
Length = 793
Score = 552 bits (1423), Expect = e-156, Method: Compositional matrix adjust.
Identities = 298/698 (42%), Positives = 433/698 (62%), Gaps = 24/698 (3%)
Query: 567 IRVKFLRLAHRLGQTPHNVVVAQVLYRLGLAEQLRGRNGGRVGA-FSFDRASAMAEQLEA 625
++V+FLRL R GQ+ +N++V++VLYR+ LA +R DRA A+A + E+
Sbjct: 98 LQVQFLRLVQRFGQSQNNILVSKVLYRVHLAMLIRAEESELKNVKLRQDRAKALAREQES 157
Query: 626 AGQEPLDFSCTIMVLGKTGVGKSATINSIFDEVKFGTDAFQMGTKKVQDVVGTVQGIKVR 685
+G LDFS I+VLGKTGVGKSATINSIF + K TDAF+ GT ++++V+GTV G+KV
Sbjct: 158 SGIPELDFSLRILVLGKTGVGKSATINSIFGQPKSETDAFRPGTDRIEEVMGTVSGVKVT 217
Query: 686 VIDTPGLLP-SWSDQRQNEKILHSVKRFIKKTPPDIVLYLDRLDMQNRDFSDMPLLRTIT 744
IDTPG P S S R+N KIL S+KR++KK PPD+VLYLDRLDM + +SD LL+ IT
Sbjct: 218 FIDTPGFHPLSSSSTRKNRKILLSIKRYVKKRPPDVVLYLDRLDMIDMRYSDFSLLQLIT 277
Query: 745 DIFGPSIWFNAIVVLTHAASAPPDGPNGTASSYDMFVTQRSHVVQQAIRQAAGDMRLMNP 804
+IFG +IW N I+V+TH+A A +G NG + +Y+ +V QR VVQ I QA D +L NP
Sbjct: 278 EIFGAAIWLNTILVMTHSA-ATTEGRNGQSVNYESYVGQRMDVVQHYIHQAVSDTKLENP 336
Query: 805 VSLVENHSACRTNRAGQRVLPNGQVWKPHLLLLSFASKILAEANTLLKLQDTP-PGKPFS 863
V LVENH +C+ N AG+ VLPNG VWKP + L +K+L + +LL+ +D+ G+P S
Sbjct: 337 VLLVENHPSCKKNLAGEYVLPNGVVWKPQFMFLCVCTKVLGDVQSLLRFRDSIGLGQPSS 396
Query: 864 TRSRAPPLPFLLSSLLQSRPQVKLPEEQFGDEDSLDDDLDDSSESEDESEFDELPPFKRL 923
TR+ + LP LLS L+ R E + + L+ DL E+E E+D+LP + L
Sbjct: 397 TRTAS--LPHLLSVFLRRRLSSGADETEKEIDKLLNLDL------EEEDEYDQLPTIRIL 448
Query: 924 TKAQVAKLTKAQKRAYFDELEYREKLFMKKQLKEEKKRRKMMKKMAAAAKDLPSDNSENV 983
K++ KL+K+QK+ Y DEL+YRE L++KKQLKEE +RR+ K + +N E+
Sbjct: 449 GKSRFEKLSKSQKKEYLDELDYRETLYLKKQLKEECRRRR-------DEKLVEEENLEDT 501
Query: 984 EEESGGAASVPVPMPDLALPASFDSDNPTHRYRYLDSSNQWLVRPVLETHGWDHDVGYEG 1043
E+ A VP+PD+A P SFDSD P HRYR + + +QWLVRPV + GWD DVG++G
Sbjct: 502 EQRDQAA----VPLPDMAGPDSFDSDFPAHRYRCVSAGDQWLVRPVYDPQGWDRDVGFDG 557
Query: 1044 INAERLFVVKNKIPVSFSGQVTKDKKDANVQMEVVSSLKHGEGKAT-SLGFDMQTVGKDL 1102
IN E + + S +GQV++DK+ +Q E ++ + T S+ D+Q+ G+DL
Sbjct: 558 INIETAAKINRNLFASATGQVSRDKQRFTIQSETNAAYTRNFREQTFSVAVDLQSSGEDL 617
Query: 1103 AYTLRSETRFSNFRKNKAMAGLSVTHLGDSLSAGVKVEDKLIVNKRFRVVMTGGAMTSRS 1162
Y+ + T+ F+ N G+ +T G G K+ED L+V KR ++ G M
Sbjct: 618 VYSFQGGTKLQTFKHNTTDVGVGLTSFGGKYYVGGKLEDTLLVGKRVKLTANAGQMRGSG 677
Query: 1163 DVAYGGSLEAQLRDADYPLGRSLTTLGLSVMDWHGDLAIGCNIQSQVPIGRSTNMIGRAN 1222
A GGS EA +R DYP+ L ++ + + +L + +Q+Q R TN+ N
Sbjct: 678 QTANGGSFEACIRGRDYPVRNEQIGLTMTALSFKRELVLNYGLQTQFRPARGTNIDVNIN 737
Query: 1223 LNNRGAGQVSIRVNSSEQLQLALIGLIPLLKKLLGYSQ 1260
+NNR G++++++NSSE ++ALI + + K L+ S+
Sbjct: 738 MNNRKMGKINVKLNSSEHWEIALISALTMFKALVRRSK 775
>sp|Q41009|TOC34_PEA Translocase of chloroplast 34 OS=Pisum sativum GN=TOC34 PE=1 SV=1
Length = 310
Score = 137 bits (344), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 102/297 (34%), Positives = 145/297 (48%), Gaps = 25/297 (8%)
Query: 597 AEQLRGRNGGRVGAFSFDRASAMAEQLEAAGQEPLDFSCTIMVLGKTGVGKSATINSIFD 656
++Q R + F+ + + E L QE ++ S TI+V+GK GVGKS+T+NSI
Sbjct: 3 SQQQTVREWSGINTFAPATQTKLLELLGNLKQEDVN-SLTILVMGKGGVGKSSTVNSIIG 61
Query: 657 EVKFGTDAFQMGTKKVQDVVGTVQGIKVRVIDTPGLLPSWSDQRQNEKILHSVKRFIKKT 716
E FQ + V + G + +IDTPGL+ N+ L+ +K F+
Sbjct: 62 ERVVSISPFQSEGPRPVMVSRSRAGFTLNIIDTPGLI---EGGYINDMALNIIKSFLLDK 118
Query: 717 PPDIVLYLDRLDMQNRDFSDMPLLRTITDIFGPSIWFNAIVVLTHAASAPPDGPNGTASS 776
D++LY+DRLD D D + + ITD FG IW AIV LTHA +PPDG
Sbjct: 119 TIDVLLYVDRLDAYRVDNLDKLVAKAITDSFGKGIWNKAIVALTHAQFSPPDG-----LP 173
Query: 777 YDMFVTQRSHVVQQAIRQAAG---DMRLMN-PVSLVENHSACRTNRAGQRVLPNGQVWKP 832
YD F ++RS + Q +R A D + + PV L+EN C N + ++VLPNG W P
Sbjct: 174 YDEFFSKRSEALLQVVRSGASLKKDAQASDIPVVLIENSGRCNKNDSDEKVLPNGIAWIP 233
Query: 833 HL------LLLSFASKILAEANTLLKLQDTPPGKPFSTRSRAPPLPFLLSSLLQSRP 883
HL + L+ + I + N L D P P PL F L L ++P
Sbjct: 234 HLVQTITEVALNKSESIFVDKN----LIDGP--NPNQRGKLWIPLIFALQYLFLAKP 284
>sp|Q38906|TOC34_ARATH Translocase of chloroplast 34, chloroplastic OS=Arabidopsis
thaliana GN=TOC34 PE=1 SV=2
Length = 313
Score = 133 bits (335), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 95/288 (32%), Positives = 146/288 (50%), Gaps = 21/288 (7%)
Query: 634 SCTIMVLGKTGVGKSATINSIFDEVKFGTDAFQMGTKKVQDVVGTVQGIKVRVIDTPGLL 693
S T++V+GK GVGKS+T+NS+ E FQ + V T G + +IDTPGL+
Sbjct: 38 SLTVLVMGKGGVGKSSTVNSVIGEKAAAVSTFQSEGLRPTLVSRTRSGFTLNIIDTPGLI 97
Query: 694 PSWSDQRQNEKILHSVKRFIKKTPPDIVLYLDRLDMQNRDFSDMPLLRTITDIFGPSIWF 753
N++ ++ +KRF+ D++LY+DRLD+ D D ++ ITD FG IW
Sbjct: 98 ---EGGYVNDQAINIIKRFLLNMTIDVLLYVDRLDVYRVDDLDRQVVGAITDAFGKEIWK 154
Query: 754 NAIVVLTHAASAPPDGPNGTASSYDMFVTQRSHVVQQAIRQAA----GDMRLMN-PVSLV 808
+ +VLTHA +PPDG N Y+ FV++RS+ + + I+ A D++ + PV LV
Sbjct: 155 KSALVLTHAQFSPPDGLN-----YNHFVSKRSNALLKVIQTGAQLKKQDLQGFSIPVILV 209
Query: 809 ENHSACRTNRAGQRVLPNGQVWKPHLLLLSFASKILAEANTLL----KLQDTPPGKPFST 864
EN C N + +++LP G W P+ L + ++I N + KL + P P
Sbjct: 210 ENSGRCHKNESDEKILPCGTSWIPN--LFNKITEISFNGNKAIHVDKKLVEGP--NPNER 265
Query: 865 RSRAPPLPFLLSSLLQSRPQVKLPEEQFGDEDSLDDDLDDSSESEDES 912
+ PL F LL +P V+ + E +L DS + S
Sbjct: 266 GKKLIPLMFAFQYLLVMKPLVRAIKSDVSRESKPAWELRDSGLASRRS 313
>sp|O23680|TOC33_ARATH Translocase of chloroplast 33, chloroplastic OS=Arabidopsis
thaliana GN=TOC33 PE=1 SV=1
Length = 297
Score = 120 bits (300), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 82/232 (35%), Positives = 117/232 (50%), Gaps = 26/232 (11%)
Query: 621 EQLEAAGQEPL-DF----------SCTIMVLGKTGVGKSATINSIFDEVKFGTDAFQMGT 669
+Q AA QE L +F S T++VLGK GVGKS+T+NS+ E FQ
Sbjct: 12 QQFPAATQEKLIEFFGKLKQKDMNSMTVLVLGKGGVGKSSTVNSLIGEQVVRVSPFQAEG 71
Query: 670 KKVQDVVGTVQGIKVRVIDTPGLLPSWSDQRQNEKILHSVKRFIKKTPPDIVLYLDRLDM 729
+ V T+ G + +IDTPGL+ + N + L +K F+ D++LY+DRLD+
Sbjct: 72 LRPVMVSRTMGGFTINIIDTPGLVEA---GYVNHQALELIKGFLVNRTIDVLLYVDRLDV 128
Query: 730 QNRDFSDMPLLRTITDIFGPSIWFNAIVVLTHAASAPPDGPNGTASSYDMFVTQRSHVVQ 789
D D ++ IT FG IW ++VLTHA +PPD SY+ F ++RS +
Sbjct: 129 YRVDELDKQVVIAITQTFGKEIWCKTLLVLTHAQFSPPD-----ELSYETFSSKRSDSLL 183
Query: 790 QAIRQAAGDMRLMN------PVSLVENHSACRTNRAGQRVLPNGQVWKPHLL 835
+ IR A MR V EN C N ++ LPNG+ W P+L+
Sbjct: 184 KTIR-AGSKMRKQEFEDSAIAVVYAENSGRCSKNDKDEKALPNGEAWIPNLV 234
>sp|Q552Z6|GTPA_DICDI GTP-binding protein A OS=Dictyostelium discoideum GN=gtpA PE=3 SV=1
Length = 449
Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 140/315 (44%), Gaps = 55/315 (17%)
Query: 635 CTIMVLGKTGVGKSATINSIFDEVKFGTDAFQMGTKKVQDVVGTVQGIKVRVIDTPGLLP 694
C +++LG+TGVGKS+T+N++F + + + T+ V G K+ +IDTPG L
Sbjct: 152 CNVLLLGRTGVGKSSTLNTVFG-IDIPVHSSESCTQDPFTYSRVVNGFKLNIIDTPGFLD 210
Query: 695 SWSDQRQNEKILHSVKRFIKKTPPDIVLYLDRLDMQNRDFSDMPLLRTITDIFGPSIWFN 754
S + + ++ ++R++ VL++++ D + ++ T+ GP +W N
Sbjct: 211 SQGELVDSNNMI-KIQRYLSGKTIHCVLFVEKFTETRFDGAHQLVINQFTEKLGPQLWRN 269
Query: 755 AIVVLTHAASAPPDGPNGTASSYDMFVTQ------RSHVVQQAI---RQAAGDMRLMN-- 803
A VVLT+A S PD S YD F + + H +A+ + AG + +
Sbjct: 270 AAVVLTYANSVLPD------SCYDGFDEEDDVGPWKKHYEARALQFRKFFAGILAQLPQD 323
Query: 804 -------PVSLVENHSACRTNRAGQRVLPNGQVWKPHLLLLSFASKILAEANTLLKLQDT 856
PV +EN C+ N GQRVL +G P L LL + LLK+ D
Sbjct: 324 DYPPKHIPVYAMENSRRCKRNEQGQRVLIDG---TPCLHLL---------ISGLLKMVD- 370
Query: 857 PPGKPFSTRSRAPPLPFLLSSLLQSRPQVKLPEEQFGDEDSLDDDLDDSSESEDESEFDE 916
P FL L R + K GD++ D +L + +
Sbjct: 371 ------------PKTAFLFMGHL--RAKNKPGRGHRGDQN--DRELSIMDNITEILKLFI 414
Query: 917 LPPFKRLTKAQVAKL 931
+PPF +L K VAK+
Sbjct: 415 VPPFDQLGKGTVAKI 429
>sp|Q96F15|GIMA5_HUMAN GTPase IMAP family member 5 OS=Homo sapiens GN=GIMAP5 PE=1 SV=1
Length = 307
Score = 54.7 bits (130), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 79/163 (48%), Gaps = 20/163 (12%)
Query: 608 VGAFSFDRASAMAEQLEAAGQEPLDFSCT-----IMVLGKTGVGKSATINSIFDEVKFGT 662
+G F + MAE G+ + S T I+++GKTG GKSAT NSI + F +
Sbjct: 1 MGGFQRGKYGTMAE-----GRSEDNLSATPPALRIILVGKTGCGKSATGNSILGQPVFES 55
Query: 663 DA-FQMGTKKVQDVVGTVQGIKVRVIDTPGLLPSWSDQRQNEKILHSVKRFIKKTP-PDI 720
Q T+ Q GT G KV V+DTP + S +D ++ K + ++ P P +
Sbjct: 56 KLRAQSVTRTCQVKTGTWNGRKVLVVDTPSIFESQADTQELYKNIGDC--YLLSAPGPHV 113
Query: 721 VLYLDRLDMQNRDFS--DMPLLRTITDIFGPSIWFNAIVVLTH 761
+L L +Q F+ D +R + ++FG + +++ TH
Sbjct: 114 LL----LVIQLGRFTAQDTVAIRKVKEVFGTGAMRHVVILFTH 152
>sp|Q4KLG2|GIMA8_RAT GTPase IMAP family member 8 OS=Rattus norvegicus GN=Gimap8 PE=2
SV=1
Length = 688
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 61/125 (48%), Gaps = 5/125 (4%)
Query: 637 IMVLGKTGVGKSATINSIFDEVKFGTD-AFQMGTKKVQDVVGTVQGIKVRVIDTPGLLPS 695
+++LGK G GKSAT N+I + F + + M TK+ Q +V+G +V VIDTP L S
Sbjct: 51 LLLLGKQGAGKSATGNTILGKAVFESRFSHHMVTKRCQSESVSVRGKQVIVIDTPDLFSS 110
Query: 696 WSDQRQNEKILHSVKRFIKKTPPDIVLYLDRLDMQNRDFSDMPLLRTITDIFGPSIWFNA 755
++ L + P ++L + + + D + I +FGP + +
Sbjct: 111 LGCPEVQQQNLRQCLDLL--ADPYVLLLVTPIGHSTEE--DKKTIEGIQGVFGPQAYRHM 166
Query: 756 IVVLT 760
IVV T
Sbjct: 167 IVVFT 171
>sp|Q8K349|GIMA6_MOUSE GTPase IMAP family member 6 OS=Mus musculus GN=Gimap6 PE=2 SV=1
Length = 305
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 61/133 (45%), Gaps = 20/133 (15%)
Query: 637 IMVLGKTGVGKSATINSIFDEVKFG--------TDAFQMGTKKVQDVVGTVQGIKVRVID 688
++++GKTG GKSAT NSI F T FQ GT++ +G ++ VID
Sbjct: 106 LLLVGKTGSGKSATGNSILGRQAFESKISARPVTTTFQKGTRE-------FEGKELEVID 158
Query: 689 TPGLLPSWSDQRQNEKILHSVKRFIKKTPPDIVLYLDRLDMQNRDFSDMPLLRTITDIFG 748
TP + S Q Q E + + P VL + ++ + D + R + +IFG
Sbjct: 159 TPDIF---SPQNQPEATAKKICDLLASPGPHAVLLVIQVGRYTAE--DQAVARCLQEIFG 213
Query: 749 PSIWFNAIVVLTH 761
+I I+V T
Sbjct: 214 NTILAYTILVFTR 226
>sp|Q5FVN6|GIMA6_RAT GTPase IMAP family member 6 OS=Rattus norvegicus GN=Gimap6 PE=2
SV=1
Length = 304
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 62/132 (46%), Gaps = 20/132 (15%)
Query: 637 IMVLGKTGVGKSATINSIFDEVKFG--------TDAFQMGTKKVQDVVGTVQGIKVRVID 688
++++GKTG GKSAT NSI F T AFQ G+++ ++G ++ VID
Sbjct: 105 LLLVGKTGSGKSATGNSILGRQVFESKISARPVTMAFQKGSRE-------LEGKELEVID 157
Query: 689 TPGLLPSWSDQRQNEKILHSVKRFIKKTPPDIVLYLDRLDMQNRDFSDMPLLRTITDIFG 748
TP +L S Q Q E + + P VL + ++ + D R + +IFG
Sbjct: 158 TPDIL---SPQNQPEATAKKICDILASPGPHAVLLVIQVGRYTTE--DQEAARCLQEIFG 212
Query: 749 PSIWFNAIVVLT 760
I I+V T
Sbjct: 213 NGILAYTILVFT 224
>sp|Q8K3L6|GIMA5_RAT GTPase IMAP family member 5 OS=Rattus norvegicus GN=Gimap5 PE=2
SV=1
Length = 326
Score = 48.1 bits (113), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 637 IMVLGKTGVGKSATINSIFDEVKFGTDAF-QMGTKKVQDVVGTVQGIKVRVIDTPGLLPS 695
I+++GK+G GKSAT NSI F + Q T+ Q +GT +G V+DTP P
Sbjct: 47 ILLVGKSGCGKSATGNSILRRPAFESRLRGQSVTRTSQAEMGTWEGRSFLVVDTP---PI 103
Query: 696 WSDQRQNEKILHSV-KRFIKKTP-PDIVLYLDRLDMQNRDFSDMPLLRTITDIFGPSIWF 753
+ + QN+ + + ++ P P ++L + +L + D +R + IFG +
Sbjct: 104 FESKIQNQDMDKDIGNCYLMCAPGPHVLLLVTQLGRYTVE--DAMAVRMVKQIFGVGVMR 161
Query: 754 NAIVVLTH 761
IV+ TH
Sbjct: 162 YMIVLFTH 169
>sp|Q9UG22|GIMA2_HUMAN GTPase IMAP family member 2 OS=Homo sapiens GN=GIMAP2 PE=1 SV=2
Length = 337
Score = 47.8 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 42/140 (30%), Positives = 65/140 (46%), Gaps = 8/140 (5%)
Query: 625 AAGQEPLDFSCTIMVLGKTGVGKSATINSIFDEVKFGTD-AFQMGTKKVQDVVGTVQGIK 683
A GQ I+++GKTG GKSA NSI + F + Q TK G+ +
Sbjct: 13 AKGQCASRSELRIILVGKTGTGKSAAGNSILRKQAFESKLGSQTLTKTCSKSQGSWGNRE 72
Query: 684 VRVIDTPGLLPSWSDQRQNEKILHSVKR-FIKKTP-PDIVLYLDRLDMQNRDFSDMPLLR 741
+ +IDTP + SW D E + V+R ++ P P ++L + +L D +
Sbjct: 73 IVIIDTPDMF-SWKD--HCEALYKEVQRCYLLSAPGPHVLLLVTQLGRYTS--QDQQAAQ 127
Query: 742 TITDIFGPSIWFNAIVVLTH 761
+ +IFG + IV+ TH
Sbjct: 128 RVKEIFGEDAMGHTIVLFTH 147
>sp|Q99MI6|GIMA3_MOUSE GTPase IMAP family member 3 OS=Mus musculus GN=Gimap3 PE=1 SV=2
Length = 301
Score = 47.4 bits (111), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 70/138 (50%), Gaps = 12/138 (8%)
Query: 626 AGQEPLDFSCTIMVLGKTGVGKSATINSIFDEVKFGTDAF-QMGTKKVQDVVGTVQGIKV 684
+G PL I+++GK+G GKSAT NS+ F + Q T+ Q GT +G +
Sbjct: 18 SGSRPLR----ILLVGKSGCGKSATGNSLLRRPAFESRLRGQSVTRTSQAETGTWEGRSI 73
Query: 685 RVIDTPGLLPSWSDQRQNEKILHSV-KRFIKKTP-PDIVLYLDRLDMQNRDFSDMPLLRT 742
V+DTP P + + QN+ + + ++ P P ++L + +L + D+ +R
Sbjct: 74 LVVDTP---PIFESKAQNQDMDKDIGDCYLLCAPGPHVLLLVTQLGRFTAE--DVMAVRM 128
Query: 743 ITDIFGPSIWFNAIVVLT 760
+ ++FG + + IV+ T
Sbjct: 129 VKEVFGVGVMRHMIVLFT 146
>sp|Q9NUV9|GIMA4_HUMAN GTPase IMAP family member 4 OS=Homo sapiens GN=GIMAP4 PE=1 SV=1
Length = 329
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 88/214 (41%), Gaps = 28/214 (13%)
Query: 628 QEPLDFSCTIMVLGKTGVGKSATINSIFDEVKF--GTDAFQMGTKKVQDVVGTVQGIKVR 685
QEP + I+++GKTG GKSAT NSI F GT A + TKK + + + ++
Sbjct: 24 QEPRNSQLRIVLVGKTGAGKSATGNSILGRKVFHSGTAAKSI-TKKCEKRSSSWKETELV 82
Query: 686 VIDTPGLLPSWSDQRQNEKILHSVKRFIKKTPPD-----IVLYLDRLDMQNRDFSDMPLL 740
V+DTPG+ + + K + R I T P +V+ L R + ++
Sbjct: 83 VVDTPGIFDTEVPNAETSK---EIIRCILLTSPGPHALLLVVPLGRYTEEEHKATE---- 135
Query: 741 RTITDIFGPSIWFNAIVVLTHA--------ASAPPDGPNGTASSYDMFVTQRSHVVQQAI 792
I +FG I++ T + P D+F + + +A
Sbjct: 136 -KILKMFGERARSFMILIFTRKDDLGDTNLHDYLREAPEDIQDLMDIFGDRYCALNNKAT 194
Query: 793 --RQAAGDMRLMNPVSLV--ENHSACRTNRAGQR 822
Q A +L+ + V EN C TNR QR
Sbjct: 195 GAEQEAQRAQLLGLIQRVVRENKEGCYTNRMYQR 228
>sp|Q8NHV1|GIMA7_HUMAN GTPase IMAP family member 7 OS=Homo sapiens GN=GIMAP7 PE=2 SV=1
Length = 300
Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 30/66 (45%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 629 EPLDFSCTIMVLGKTGVGKSATINSIFDEVKFGTD-AFQMGTKKVQDVVGTVQGIKVRVI 687
E D S I+++GKTG GKSAT N+I E F + A Q TK Q QG + V+
Sbjct: 3 ESEDRSLRIVLVGKTGSGKSATANTILGEEIFDSRIAAQAVTKNCQKASREWQGRDLLVV 62
Query: 688 DTPGLL 693
DTPGL
Sbjct: 63 DTPGLF 68
>sp|Q99JY3|GIMA4_MOUSE GTPase IMAP family member 4 OS=Mus musculus GN=Gimap4 PE=1 SV=1
Length = 219
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 59/129 (45%), Gaps = 12/129 (9%)
Query: 637 IMVLGKTGVGKSATINSIFDEVKFGTDAFQMG-TKKVQDVVGTVQGIKVRVIDTPGLL-- 693
I++LGKTG GKS+T NSI E F + TK + V T G ++ V+DTPG+
Sbjct: 33 IVLLGKTGAGKSSTGNSILGEKVFNSGICAKSITKVCEKRVSTWDGKELVVVDTPGIFDT 92
Query: 694 --PSWSDQRQNEKILHSVKRFIKKTPPDIVLYLDRLDMQNRDFSDMPLLRTITDIFGPSI 751
P QR+ + R++ T P L + + + + I D+FG
Sbjct: 93 EVPDADTQRE-------ITRYVALTSPGPHALLLVVPLGRYTVEEHKATQKILDMFGKQA 145
Query: 752 WFNAIVVLT 760
I++LT
Sbjct: 146 RRFMILLLT 154
>sp|Q8BWF2|GIMA5_MOUSE GTPase IMAP family member 5 OS=Mus musculus GN=Gimap5 PE=2 SV=1
Length = 308
Score = 45.1 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 39/131 (29%), Positives = 67/131 (51%), Gaps = 9/131 (6%)
Query: 634 SC-TIMVLGKTGVGKSATINSIFDEVKFGTDAF-QMGTKKVQDVVGTVQGIKVRVIDTPG 691
SC I+++GK+G GKSAT NSI F + Q T+ Q GT +G + V+DTP
Sbjct: 25 SCLRILLVGKSGCGKSATGNSILRRPAFQSRLRGQSVTRTSQAETGTWEGRSILVVDTP- 83
Query: 692 LLPSWSDQRQNEKILHSVKR-FIKKTP-PDIVLYLDRLDMQNRDFSDMPLLRTITDIFGP 749
P + + QN+ + + ++ P P ++L + +L + D +R + ++FG
Sbjct: 84 --PIFESKAQNQDMDKDIGDCYLLCAPGPHVLLLVTQLGRFTAE--DAMAVRMVKEVFGV 139
Query: 750 SIWFNAIVVLT 760
+ + IV+ T
Sbjct: 140 GVMRHMIVLFT 150
>sp|Q75N62|GIMA8_MOUSE GTPase IMAP family member 8 OS=Mus musculus GN=Gimap8 PE=2 SV=1
Length = 688
Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 8/127 (6%)
Query: 637 IMVLGKTGVGKSATINSIFDEVKFGTD-AFQMGTKKVQDVVGTVQGIKVRVIDTPGLLP- 694
+++LGK G GKSAT N+I + F + + M T + Q +V+G +V VIDTP L
Sbjct: 51 LLLLGKQGAGKSATGNTILGKAVFESKFSDHMVTDRCQSESVSVRGKQVIVIDTPDLFSS 110
Query: 695 -SWSDQRQNEKILHSVKRFIKKTPPDIVLYLDRLDMQNRDFSDMPLLRTITDIFGPSIWF 753
S S+ RQ ++K+ ++ D + L + + D + I GP +
Sbjct: 111 LSCSEVRQ-----QNLKQCLELLADDHCVLLLVTPIGHYTEEDRETIEGIWGKIGPKAYR 165
Query: 754 NAIVVLT 760
+ IVV T
Sbjct: 166 HMIVVFT 172
Score = 36.6 bits (83), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 637 IMVLGKTGVGKSATINSIFDEVKFGTDAF--QMGTKKVQDVVGTVQGIKVRVIDTPGLLP 694
++++GK GVGKSA NSI + F T Q TK QG KV +ID+P +
Sbjct: 287 VLLMGKRGVGKSAAGNSILGKQVFKTQFSEKQRVTKAFASHSRVWQGKKVLIIDSPE-IS 345
Query: 695 SW 696
SW
Sbjct: 346 SW 347
>sp|Q6P9H5|GIMA6_HUMAN GTPase IMAP family member 6 OS=Homo sapiens GN=GIMAP6 PE=2 SV=1
Length = 292
Score = 43.5 bits (101), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 15/131 (11%)
Query: 637 IMVLGKTGVGKSATINSIFDEVKFGTDAFQMG------TKKVQDVVGTVQGIKVRVIDTP 690
++++GKTG GKSAT NSI G D F+ TK Q G ++ VIDTP
Sbjct: 43 LILMGKTGSGKSATGNSI-----LGRDVFESKLSTRPVTKTSQRRSREWAGKELEVIDTP 97
Query: 691 GLLPSWSDQRQNEKILHSVKRFIKKTPPDIVLYLDRLDMQNRDFSDMPLLRTITDIFGPS 750
+L + I ++ + P VL + +L + D ++R + ++FG
Sbjct: 98 NILSPQVSPEVADAICQAI--VLSAPGPHAVLLVTQLGRFTDE--DQQVVRRLQEVFGVG 153
Query: 751 IWFNAIVVLTH 761
+ + I+V T
Sbjct: 154 VLGHTILVFTR 164
>sp|Q5BKN4|SEP2A_XENTR Septin-2A OS=Xenopus tropicalis GN=sept2-A PE=2 SV=1
Length = 350
Score = 41.2 bits (95), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 10/87 (11%)
Query: 633 FSCTIMVLGKTGVGKSATINSIFDEVKFGTDAFQMGTKKVQDVV----GTVQ----GIKV 684
F T+MV+G++G+GKS INS+F + +K++ V TV+ G+K+
Sbjct: 35 FEFTLMVVGESGLGKSTLINSLFLTDLYPERYIPGAAEKIERTVQIEASTVEIEERGVKL 94
Query: 685 R--VIDTPGLLPSWSDQRQNEKILHSV 709
R V+DTPG + + Q + I+H +
Sbjct: 95 RLTVVDTPGYGDAINSQDCFKTIIHYI 121
>sp|Q9UHD8|SEPT9_HUMAN Septin-9 OS=Homo sapiens GN=SEPT9 PE=1 SV=2
Length = 586
Score = 40.8 bits (94), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 59/129 (45%), Gaps = 15/129 (11%)
Query: 595 GLAEQLRGRNGGRVGAFSFDRASAMAEQLEAAGQEPLDFSCTIMVLGKTGVGKSATINSI 654
GL + RN F + ++ EQ+ + F IMV+G++G+GKS IN++
Sbjct: 260 GLKQAPASRNEKAPVDFGYVGIDSILEQMRRKAMK-QGFEFNIMVVGQSGLGKSTLINTL 318
Query: 655 F------DEVKFGTDAFQMGTKKVQDVVGTVQ----GIKVRVIDTPGLLPSWSDQRQNEK 704
F V+ ++ T +++ + ++ +K+ VIDTPG + D NE
Sbjct: 319 FKSKISRKSVQPTSEERIPKTIEIKSITHDIEEKGVRMKLTVIDTPG----FGDHINNEN 374
Query: 705 ILHSVKRFI 713
+ +FI
Sbjct: 375 CWQPIMKFI 383
>sp|Q9QZR6|SEPT9_RAT Septin-9 OS=Rattus norvegicus GN=Sept9 PE=1 SV=1
Length = 564
Score = 40.4 bits (93), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 16/92 (17%)
Query: 633 FSCTIMVLGKTGVGKSATINSIFDEVKFGTDAFQ-------MGTKKVQDVVGTVQ----G 681
F IMV+G++G+GKS IN++F K + Q T +++ + ++
Sbjct: 277 FEFNIMVVGQSGLGKSTLINTLFKS-KISRKSVQPISEERIPKTIEIKSITHDIEEKGVR 335
Query: 682 IKVRVIDTPGLLPSWSDQRQNEKILHSVKRFI 713
+K+ VIDTPG + D NE + +FI
Sbjct: 336 MKLTVIDTPG----FGDHINNENCWQPIMKFI 363
>sp|P70224|GIMA1_MOUSE GTPase IMAP family member 1 OS=Mus musculus GN=Gimap1 PE=1 SV=3
Length = 277
Score = 39.7 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 34/129 (26%), Positives = 58/129 (44%), Gaps = 11/129 (8%)
Query: 637 IMVLGKTGVGKSATINSIFDEVKFGTDAFQMGTKKVQDVVGTV-QGIKVRVIDTPGLLPS 695
++++G+TG GKSAT NSI + F + + + + + G +V V+DTP + S
Sbjct: 6 LILVGRTGTGKSATGNSILGQKCFLSRLGAVPVTRSCTLASRMWAGWQVEVVDTPDIFSS 65
Query: 696 WSDQRQNEKILHSVKRFIKKTPPD----IVLYLDRLDMQNRDFSDMPLLRTITDIFGPSI 751
R + + + + F+ P +V L R MQ D L + +FG +
Sbjct: 66 -EIPRTDPGCVETARCFVLSAPGPHALLLVTQLGRFTMQ-----DSQALAAVKRLFGKQV 119
Query: 752 WFNAIVVLT 760
+VV T
Sbjct: 120 MARTVVVFT 128
>sp|P39827|CDC10_CANAL Cell division control protein 10 OS=Candida albicans (strain SC5314
/ ATCC MYA-2876) GN=CDC10 PE=2 SV=1
Length = 357
Score = 39.7 bits (91), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 44/96 (45%), Gaps = 22/96 (22%)
Query: 633 FSCTIMVLGKTGVGKSATINSIFDEVKFGTDAFQMGTKKVQDVVGTVQGIKV-------- 684
F IMV+G++G+GKS +N++F K T G K + + IKV
Sbjct: 36 FQFNIMVVGRSGLGKSTLVNTLFSS-KLTTS---QGRKSPSEPIEKTTEIKVASHSLLEN 91
Query: 685 ------RVIDTPGLLPSWSDQRQNEKILHSVKRFIK 714
VIDTPG + DQ NEK + +++K
Sbjct: 92 NVRLNINVIDTPG----FGDQINNEKCWEPLVKYVK 123
>sp|P74120|DER_SYNY3 GTPase Der OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=der
PE=3 SV=1
Length = 452
Score = 38.5 bits (88), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 6/104 (5%)
Query: 591 LYRLGLAEQ--LRGRNGGRVGAFSFDRASAMAEQLEAAGQEPLDFSCTIMVLGKTGVGKS 648
+ LGL E + +G G D A+ E L A +EP + + ++G+ VGKS
Sbjct: 135 FWHLGLGEPYPMSAIHGSGTG----DLLDALLEYLPAPQEEPEEDEIKVAIVGRPNVGKS 190
Query: 649 ATINSIFDEVKFGTDAFQMGTKKVQDVVGTVQGIKVRVIDTPGL 692
+ +N++ E + T+ D+V G K R+IDT G+
Sbjct: 191 SLLNALTGEQRAIVSPISGTTRDAIDMVVERNGQKYRLIDTAGI 234
>sp|Q39PQ9|MNME_GEOMG tRNA modification GTPase MnmE OS=Geobacter metallireducens (strain
GS-15 / ATCC 53774 / DSM 7210) GN=mnmE PE=3 SV=1
Length = 457
Score = 37.7 bits (86), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 52/92 (56%), Gaps = 10/92 (10%)
Query: 636 TIMVLGKTGVGKSATINSIFDEVKFGTDAFQMGTKKVQDVVGTVQGIKVRVIDTPGLLPS 695
++++ GK VGKS+ +N++ E + + T+ + + V V+G+ +R++DT G+
Sbjct: 223 SVLIAGKPNVGKSSLLNTLLQEKRAIVTSVPGTTRDIIEEVVNVRGLPLRMLDTAGI--- 279
Query: 696 WSDQRQNEKILHS--VKRFIKKTP-PDIVLYL 724
R+ E ++ V+ ++K P D++L++
Sbjct: 280 ----RETEDVVEQEGVRLTLEKIPQADLILFV 307
>sp|A5GHT2|TIG_SYNPW Trigger factor OS=Synechococcus sp. (strain WH7803) GN=tig PE=3
SV=1
Length = 481
Score = 37.0 bits (84), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 37/83 (44%), Gaps = 7/83 (8%)
Query: 49 EGTKDESGDDASVGDLGSVVVDGGSNVGGEMDSFDETEGVPSEGGNDVVGEGEGKVGDLA 108
EG K E GD A VG G+ DG GG DS D V E G + G EG VG
Sbjct: 167 EGRKAEQGDIAVVGFKGTYSDDGSEIEGGSADSMD----VDLEHGRMIPGFVEGVVGMAV 222
Query: 109 GAESVIEVVVPD---KVDERGTK 128
G ++ P+ K D RG K
Sbjct: 223 GDSKTVDCTFPEDYPKEDARGRK 245
>sp|Q8EW66|ERA_MYCPE GTPase Era OS=Mycoplasma penetrans (strain HF-2) GN=era PE=3 SV=2
Length = 298
Score = 37.0 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 35/113 (30%), Positives = 61/113 (53%), Gaps = 12/113 (10%)
Query: 637 IMVLGKTGVGKSATINSIFD-EVKFGTDAFQMGTKKVQDVVGTVQGIKVRVIDTPGLLPS 695
+ ++GK VGKS +N+IF+ EV ++ Q ++ +++ + IDTPGL
Sbjct: 6 VSIVGKPNVGKSTLLNNIFEREVVISSNKPQTTRNMIEISYDSIEDCVINFIDTPGL--- 62
Query: 696 WSDQRQNEKILHS-VKRFIKKTPPDIVLYLDRLDMQNRDF--SDMPLLRTITD 745
+ + + + L+S VK +KK+ D+VL+L L +RDF D L+ + D
Sbjct: 63 HNPKNKLDLFLNSQVKASLKKS--DLVLFLFDL---SRDFDSEDEECLKVLKD 110
>sp|A4XHX9|DER_CALS8 GTPase Der OS=Caldicellulosiruptor saccharolyticus (strain ATCC
43494 / DSM 8903) GN=der PE=3 SV=2
Length = 439
Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 72/161 (44%), Gaps = 18/161 (11%)
Query: 558 DETREKLQMIRV--KFLRLA-HRLGQTPHNVVVAQVLYRLGLAEQ--LRGRNGGRVGAFS 612
D RE M+RV K + LA +++ ++ + Y LGL++ + +G VG
Sbjct: 98 DADREVANMLRVSKKPIVLAVNKIDNISEQPIIYE-FYELGLSDPIPMSAEHGSGVG--- 153
Query: 613 FDRASAMAEQLEAAG-QEPLDFSCTIMVLGKTGVGKSATINSIFDEVKFGTDAFQMGTKK 671
D A+ + G E + S + ++GK GKS+ +N I E + T+
Sbjct: 154 -DVLDAVVSYFDKVGINEIEEDSIKVAIIGKPNTGKSSLVNYILGEERVIVSDIPGTTRD 212
Query: 672 VQDVVGTVQGIKVRVIDTPGLLPSWSDQRQNEKILHSVKRF 712
D +GI + +IDT GL R+ KI +++R+
Sbjct: 213 AIDSYVEFEGIPLTLIDTAGL-------RRKSKIYDNIERY 246
>sp|A8YV35|DER_LACH4 GTPase Der OS=Lactobacillus helveticus (strain DPC 4571) GN=der
PE=3 SV=1
Length = 435
Score = 35.8 bits (81), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 59/135 (43%), Gaps = 19/135 (14%)
Query: 573 RLAHRLGQTPHNVVVA-------------QVLYRLGLAEQL--RGRNGGRVGAFSFDRAS 617
R+AH L +T V++A Y LGL + + +G +G + S
Sbjct: 102 RIAHLLYRTKKPVILAVNKADNPEQRNDIYDFYSLGLGDPIPVSSSHGTGIGDLLDEIVS 161
Query: 618 AMAEQLEAAGQEPLDFSCTIMVLGKTGVGKSATINSIFDEVKFGTDAFQMGTKKVQDVVG 677
+ ++ + + FS V+G+ VGKS+ +N + E + + T+ D
Sbjct: 162 DFPAEKDSQANDVISFS----VIGRPNVGKSSIVNKLLGEDRVIVANEEGTTRDAVDTPF 217
Query: 678 TVQGIKVRVIDTPGL 692
T G+K +V+DT G+
Sbjct: 218 TKDGVKFKVVDTAGI 232
>sp|Q477Q5|MNME_DECAR tRNA modification GTPase MnmE OS=Dechloromonas aromatica (strain
RCB) GN=mnmE PE=3 SV=1
Length = 448
Score = 35.4 bits (80), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 85/182 (46%), Gaps = 11/182 (6%)
Query: 619 MAEQLEAAGQEPLDFSCTIMVL-GKTGVGKSATINSIF-DEVKFGTDAFQMGTKKVQDVV 676
+AE + AGQ L S +VL G+ VGKS+ +N + D++ T ++ +
Sbjct: 198 LAEIFDRAGQGKLLQSGLHVVLAGQPNVGKSSLLNRLAGDDLAIVTPIAGTTRDALRSTI 257
Query: 677 GTVQGIKVRVIDTPGLLPSWSDQRQNEKILHSVKRFIKKTPPDIVLYLDRLDMQN-RDFS 735
++GI + +IDT GL + D+ + I S K + D+VL L +D + S
Sbjct: 258 -QIEGIPLHIIDTAGLRET-DDEVEKIGIERSWKEIERS---DVVLLL--VDARTGVSES 310
Query: 736 DMPLLRTITDIFGPSIWFNAIVVLTHAASAPPDGPNGTASSYDMFVTQRSHVVQQAIRQA 795
D +L + D +N I LTH A+ D NGTA S Q +++Q + +
Sbjct: 311 DREILARLPDRLQRITVYNKID-LTHRAAERHDEANGTAISLSAKANQGIELLRQELLRI 369
Query: 796 AG 797
AG
Sbjct: 370 AG 371
>sp|Q74JL6|DER_LACJO GTPase Der OS=Lactobacillus johnsonii (strain CNCM I-12250 / La1 /
NCC 533) GN=der PE=3 SV=1
Length = 435
Score = 34.7 bits (78), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 54/125 (43%), Gaps = 8/125 (6%)
Query: 591 LYRLGLAEQL--RGRNGGRVGAFSFDRASAMAEQLEAAGQEPLDFSCTIMVLGKTGVGKS 648
Y LGL + + G +G +G D A+ + + D S V+G+ VGKS
Sbjct: 133 FYSLGLGDPIPVSGSHGTGMG----DLLDAIVGEFGDKANQHEDGSIRFSVIGRPNVGKS 188
Query: 649 ATINSIFDEVKFGTDAFQMGTKKVQDVVGTVQGIKVRVIDTPGLLPSWSDQRQNEKILHS 708
+ +N+I E + + T+ D T G K ++DT G+ + EK +S
Sbjct: 189 SLVNAILGEQRVIVSNIEGTTRDAIDTTFTNDGQKYTIVDTAGIRRRGKVYEKTEK--YS 246
Query: 709 VKRFI 713
V R I
Sbjct: 247 VLRAI 251
>sp|Q3ANI7|TIG_SYNSC Trigger factor OS=Synechococcus sp. (strain CC9605) GN=tig PE=3
SV=1
Length = 469
Score = 34.3 bits (77), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 37/83 (44%), Gaps = 7/83 (8%)
Query: 49 EGTKDESGDDASVGDLGSVVVDGGSNVGGEMDSFDETEGVPSEGGNDVVGEGEGKVGDLA 108
EG ++GD A +G G+ DG GG DS D V E G + G EG +G
Sbjct: 167 EGRAAQNGDIAVLGFKGTYTDDGSEIEGGSADSMD----VDLENGRMIPGFIEGVIGMKV 222
Query: 109 GAESVIEVVVPD---KVDERGTK 128
G ++ PD K D RG K
Sbjct: 223 GETKTVDCQFPDDYPKEDARGRK 245
>sp|Q7UA35|TIG_SYNPX Trigger factor OS=Synechococcus sp. (strain WH8102) GN=tig PE=3
SV=1
Length = 472
Score = 33.9 bits (76), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 36/83 (43%), Gaps = 7/83 (8%)
Query: 49 EGTKDESGDDASVGDLGSVVVDGGSNVGGEMDSFDETEGVPSEGGNDVVGEGEGKVGDLA 108
EG E GD A +G G+ DG GG DS D V E G + G EG +G
Sbjct: 167 EGRAAEQGDIAVLGFKGTYSDDGSEIEGGSADSMD----VDLEHGRMIPGFIEGVIGMAV 222
Query: 109 GAESVIEVVVPD---KVDERGTK 128
G ++ PD K D RG K
Sbjct: 223 GDSKTVDCQFPDDYPKEDARGRK 245
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.310 0.130 0.362
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 493,362,143
Number of Sequences: 539616
Number of extensions: 23481869
Number of successful extensions: 85750
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 130
Number of HSP's successfully gapped in prelim test: 802
Number of HSP's that attempted gapping in prelim test: 82252
Number of HSP's gapped (non-prelim): 3651
length of query: 1266
length of database: 191,569,459
effective HSP length: 129
effective length of query: 1137
effective length of database: 121,958,995
effective search space: 138667377315
effective search space used: 138667377315
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 67 (30.4 bits)